BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|255764497|ref|YP_003065010.2| ABC transporter permease
[Candidatus Liberibacter asiaticus str. psy62]
         (587 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|255764497|ref|YP_003065010.2| ABC transporter permease [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254547848|gb|ACT57070.2| ABC transporter permease [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 587

 Score = 1186 bits (3067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/587 (100%), Positives = 587/587 (100%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS
Sbjct: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV
Sbjct: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF
Sbjct: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA
Sbjct: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY
Sbjct: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
           SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA
Sbjct: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP
Sbjct: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK
Sbjct: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG
Sbjct: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL
Sbjct: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587


>gi|315121797|ref|YP_004062286.1| ABC transporter permease [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495199|gb|ADR51798.1| ABC transporter permease [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 555

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/553 (76%), Positives = 485/553 (87%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +L   +QETTVP DIVDIVPITLDV SLP+YASRTTLRML A+V+SLLFTF+YATLAAKS
Sbjct: 1   MLFRSVQETTVPCDIVDIVPITLDVSSLPKYASRTTLRMLIAIVVSLLFTFIYATLAAKS 60

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RRLGMVL+PILDIMQSIPILGFLTFTV+YF++LYPG+VIGAE AAIFAIFTSQVWNMTFS
Sbjct: 61  RRLGMVLIPILDIMQSIPILGFLTFTVIYFISLYPGRVIGAEFAAIFAIFTSQVWNMTFS 120

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           MYQSLCNIP+DLEEVSRSFRLSGWQKFW L VPFS+PGLVWNMM+SMSGGWFFVVA+EMI
Sbjct: 121 MYQSLCNIPKDLEEVSRSFRLSGWQKFWNLDVPFSIPGLVWNMMISMSGGWFFVVAAEMI 180

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           VVGDTVI LPGIGSY+ALAIKE+ L+++LYAMLTM+GVI LYDQLLFRP+I WSNKFRLE
Sbjct: 181 VVGDTVISLPGIGSYVALAIKERSLVSVLYAMLTMVGVILLYDQLLFRPIIAWSNKFRLE 240

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
           RTT ++ +D WVL LFRKTNFLRF+G+SS+    PLS N  KL R    I+F+FP+N   
Sbjct: 241 RTTAVHSSDPWVLSLFRKTNFLRFLGHSSYKIILPLSCNFNKLYRLFNYIQFYFPDNLGL 300

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
              N+++SY+LDI WF  V  +A+GIAW+S  YI+++  Y D+LYV WLGCITM RVV+L
Sbjct: 301 FSCNKKISYILDIIWFLAVYSIAMGIAWKSFEYIIDNLGYYDILYVFWLGCITMLRVVIL 360

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           IIIA+IIW+P+G+WIG RPHI+SKIQPFAQ LAAFP+N+FFPLVVS + YY LNPN+WLS
Sbjct: 361 IIIATIIWVPIGVWIGMRPHIASKIQPFAQFLAAFPSNIFFPLVVSIIFYYDLNPNIWLS 420

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            LMI GTQWYILFN+I+G SAFPNDFKEV  SFH+TGW  WRY+ILPGIFP+YVTGAITA
Sbjct: 421 SLMILGTQWYILFNIISGTSAFPNDFKEVVQSFHVTGWYRWRYVILPGIFPFYVTGAITA 480

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           CGGAWNASIVSEVASWG+I+LR TGLGAYIAESTEKG+FPEV LG+L+MCCFVL LN FL
Sbjct: 481 CGGAWNASIVSEVASWGNIYLRATGLGAYIAESTEKGNFPEVALGILVMCCFVLFLNIFL 540

Query: 574 WHPLYLYGTRCLR 586
           W PLY Y  R LR
Sbjct: 541 WRPLYRYSARHLR 553


>gi|146337816|ref|YP_001202864.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146190622|emb|CAL74624.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 577

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/588 (56%), Positives = 431/588 (73%), Gaps = 13/588 (2%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L ++    +   + PNI+D++A ++V+G + ++++G ++TT+P   +D  P++LD  +
Sbjct: 1   MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A++ SL+FTFVYA LAAKSRR  +VL+P+LDI+QS+PILGFLTFTV
Sbjct: 61  LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F
Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A
Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I  A+LTML VI  YDQLLFRP++ W++KFR E+T    P  SW+L LFR+T  LR    
Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALR---- 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF-CVVCGVAIGI 359
                   LS     + RT   +R ++P+ +     +   S ++D  W   VV G A   
Sbjct: 297 -------SLSIPFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYA- 348

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W++  Y+       DV   I  G IT+ RV VLI +AS+IW+PVG+WIG RP ++ ++Q
Sbjct: 349 GWKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQ 408

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P AQ LAAFPAN+ FP+ V  +  Y LN ++WLS LMI GTQWYILFNVIAGASAFP+D 
Sbjct: 409 PLAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDL 468

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +E A+S H+TGWRWW  ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG  HL  +GL
Sbjct: 469 REAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGL 528

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GAYIA +TE+G FP VVLG+ +MC  V   NR LW PLY +G R LRL
Sbjct: 529 GAYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576


>gi|148258661|ref|YP_001243246.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410834|gb|ABQ39340.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 577

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/587 (56%), Positives = 422/587 (71%), Gaps = 11/587 (1%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L +     +   + PNI+D++A ++V+G + ++++G ++TT P   +D  P++LD  +
Sbjct: 1   MMLQDFRTAVLRETVRPNIWDVVALIIVVGAMVLIVYGGEQTTQPLSALDTAPVSLDPSN 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A+  SL+FTFVYA LAAKSRR  +VL+P+LDI+QS+PILGFLTFTV
Sbjct: 61  LPLYALRTTLRMLLAITCSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F
Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A
Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I  A+LTML VI  YDQLLFRP++ W++KFR E+T    P  SW+L LFR+T  LR    
Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGDPPSSWMLDLFRRTRALR---- 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                   LS     L R    +R ++P  +         S ++D  W  VV        
Sbjct: 297 -------KLSVPFAALNRAFSNLRLNWPTAWSGPVRRAPPSQLVDGLWLAVVVIGCAYAG 349

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W++  Y+       DVL     G IT+ RV VLI +AS+IW+PVG+WIG RP ++ +IQP
Sbjct: 350 WKTYLYLSATLAPSDVLSATGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERIQP 409

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            AQ LAAFPAN+ FP+ V  +  Y LN N+WLS LMI GTQWYILFNVIAGASAFP D +
Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNANVWLSPLMILGTQWYILFNVIAGASAFPTDLR 469

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A+S H+TGWRWW  ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG  HL  +GLG
Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIA +TE+G FP VVLG+ +MC  V   NR LW PLY +G R LRL
Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576


>gi|148252998|ref|YP_001237583.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405171|gb|ABQ33677.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 585

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/589 (55%), Positives = 428/589 (72%), Gaps = 14/589 (2%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L ++    ++R   PN++DL+A +LVIG + ++++G ++TT+P   +D+ P++LD  +
Sbjct: 8   MRLQDLRLAVLTRAPRPNVWDLIALILVIGAMVLIVYGGKQTTLPLSALDVSPVSLDPAN 67

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A+  S +FTF+YA +AAKSRR  MVL+P+LDI+QS+PILGFLTFTV
Sbjct: 68  LPFYALRTTLRMLLAIACSTVFTFIYAAVAAKSRRAEMVLIPLLDILQSVPILGFLTFTV 127

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F+NL+PG+V+GAELA +FAIFTSQ WNMTFSMYQSL N+P+DL+E S+SF LSGWQ+F
Sbjct: 128 VFFLNLFPGRVLGAELACVFAIFTSQAWNMTFSMYQSLRNVPKDLDEASKSFHLSGWQRF 187

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VPF+MPGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GSY+ALAI+++DL A
Sbjct: 188 WRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGVGSYVALAIEKRDLAA 247

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I YA+ TML VI +YDQLLFRP++ W++KFR E+T       SW+L LFR+T  LR    
Sbjct: 248 IGYAIFTMLLVIIVYDQLLFRPIVAWADKFRFEQTASGDAPTSWMLDLFRRTRALR---- 303

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG 358
                   L+     L R    +   +P   L+  S      S ++D  WF ++      
Sbjct: 304 -------ALTLPFAALNRAFSNLSAEWPRA-LRPSSKPGAPPSRLIDALWFAIIGIATGY 355

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            A+++  Y+  +    DV   +  G  T+ RV+ LI +A++IW+P+G+WIG RP I+ ++
Sbjct: 356 AAYKAYYYLSANLQLSDVYEAVLGGFATLLRVITLIALATLIWVPIGVWIGLRPRIAERV 415

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           QP AQ LAAFPAN+ FP+ V  + +Y LN N+WLS LMI GTQWYILFNVIAGASAFP+D
Sbjct: 416 QPLAQFLAAFPANLAFPVFVLWIVHYGLNSNIWLSPLMILGTQWYILFNVIAGASAFPSD 475

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +E A+S H+TGWRWW  +ILPGIFPYYVTGAITA GG+WNASIV+EVASWG  HL  TG
Sbjct: 476 LREAAASLHLTGWRWWIKVILPGIFPYYVTGAITASGGSWNASIVAEVASWGDTHLSATG 535

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGAYIA++TE G FP VVLG+ IMC  V   NR  W PLY +G R LRL
Sbjct: 536 LGAYIAKATEDGDFPRVVLGIAIMCIMVTLFNRLFWRPLYAFGERRLRL 584


>gi|222106535|ref|YP_002547326.1| ABC-type anion transport system, duplicated permease component
           [Agrobacterium vitis S4]
 gi|221737714|gb|ACM38610.1| ABC-type anion transport system, duplicated permease component
           [Agrobacterium vitis S4]
          Length = 556

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/566 (56%), Positives = 413/566 (72%), Gaps = 11/566 (1%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +L+IG+I +  +G + TT+P   +D  P++LD  +LP YA RT LRML+A+V SL+
Sbjct: 1   MMALLLIIGVIVLFAYGERVTTIPLSALDAAPLSLDPTNLPIYALRTILRMLAAIVFSLI 60

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           FT +YA++AAKSRR  MV++P+LDI+QS+PILGFLTFTV +F+NL+PG+VIGAELAA+FA
Sbjct: 61  FTLIYASVAAKSRRAEMVMIPVLDILQSVPILGFLTFTVTFFLNLFPGRVIGAELAAVFA 120

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IFTSQ WNMTFS+YQS+ + P+DLEE +RSF+LSGWQ+FW L VPF+MPGLVWN MMSMS
Sbjct: 121 IFTSQAWNMTFSLYQSMRSQPKDLEEATRSFQLSGWQRFWRLDVPFAMPGLVWNTMMSMS 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           GGWFFVVASE I VG+T + LPGIGSY+ALAIK+QD+LA+ YA++ ML VI LYDQL+FR
Sbjct: 181 GGWFFVVASEAITVGNTTVTLPGIGSYVALAIKQQDILAVFYAVIAMLAVILLYDQLMFR 240

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321
           P++ W++KFR E T       SW+L L RK    R +        +PL N V +   TL 
Sbjct: 241 PLVAWADKFRFETTASGVAPSSWMLDLLRKARVTRLL-------LAPL-NWVARQLWTLR 292

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
           + +     +     +N RV   + I         A  I   S  Y+     + ++  VI 
Sbjct: 293 LPKLRSTGSKTASPANSRVIDWIWIAIIACAAAWAAYI---SFDYLRASIGWSEIPTVIL 349

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            G IT+ RV+VL+ IA+++W+PVG+WIG RP +S K+QP AQ LAAFPAN+ FP+ V  +
Sbjct: 350 YGSITLLRVIVLMAIATVVWVPVGVWIGLRPKLSEKVQPLAQFLAAFPANIAFPVFVVVI 409

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            ++ LN ++WLS LMI GTQWYILFNVIAGASAFP+D KE A SFHITGWRWW  +ILPG
Sbjct: 410 VHFGLNADIWLSPLMILGTQWYILFNVIAGASAFPSDLKEAARSFHITGWRWWFKVILPG 469

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           IFPYY+TGAITA GG+WNASIV+EVASWG   L T GLG+YIA +T  G FP VVLG+++
Sbjct: 470 IFPYYITGAITASGGSWNASIVAEVASWGDTQLTTPGLGSYIANATTAGDFPRVVLGIIV 529

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587
           MC FV   NR +W PLY YG   LRL
Sbjct: 530 MCTFVTLFNRLVWRPLYAYGESRLRL 555


>gi|158424701|ref|YP_001525993.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans
           ORS 571]
 gi|158331590|dbj|BAF89075.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans
           ORS 571]
          Length = 582

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/575 (54%), Positives = 408/575 (70%), Gaps = 11/575 (1%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR F   FDL AF+LV G+  +   G Q+T +P   ++  PI+L    LP+YA RTTLRM
Sbjct: 18  RRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYALRTTLRM 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+A+V SL+FTF+Y  LAAKSRR  MVL+P+LDI+QS+P+LGFL+FTV++FMNL+PGKVI
Sbjct: 78  LAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMNLFPGKVI 137

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E+AA+FAIFTSQ WNMTFS YQSL  +PRDL EVSR FRL+GWQ+FW L VPFSMPGL
Sbjct: 138 GVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLTGWQRFWRLEVPFSMPGL 197

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           VWN MMSMSGGWFFVVASE I VG+T I LPGIG+Y++ AI E++L A+ +++  ML +I
Sbjct: 198 VWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAERNLTAVAWSVGAMLVII 257

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            +YDQLLFRP++ W+++FR E++ G  P  SWVL + ++ +  R +        SP    
Sbjct: 258 LIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRLL-------LSP---- 306

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V  L R L  +    P       +    S  +D  W  +V  +A+   W  + ++     
Sbjct: 307 VGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSFVATEVG 366

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V WLG +T+ RV VLI +AS+IW+PVG+WIG RP +++ +QP AQ LAAFPAN+
Sbjct: 367 LAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFLAAFPANI 426

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP  V  +    L+PN+WLS LM+ GTQWYILFNVIAGASAFPND KE ASSFH+ G +
Sbjct: 427 VFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSFHLRGAQ 486

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WW  +ILPG+FPYYVTGA+TA GG+WNASIV+EVASWG   LR  GLG+YIA++T    +
Sbjct: 487 WWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADATTAADY 546

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P + LG+ +M  +V+A NR LW PL+ +  + LRL
Sbjct: 547 PRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRL 581


>gi|167585833|ref|ZP_02378221.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia ubonensis Bu]
          Length = 584

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPITTLNTQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDKNLGAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +   F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P         ++ S+  DI W  +V      + W+ + ++    T 
Sbjct: 317 LRLPLS-GAVRFTLPR------VEKKASFAADIAWALLVLAGTAYVVWRVVSFVAAGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV+VLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVFTLGLITLLRVIVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  V  ++++ LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPAFVIVIAHFRLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 550 KIILGITVMSLFVTLFNRLLWRPLYAYAESKLRL 583


>gi|171321263|ref|ZP_02910228.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171093457|gb|EDT38635.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 585

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W   V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVWVGLRPRLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|167841086|ref|ZP_02467770.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 585

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 412/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQKISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGIVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIAEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P         ++ S+  DI W  +V      + W+ +G++    T 
Sbjct: 318 LRLPLS-GAVRFTLPR------VEKKASFAADIVWAILVLAGTAYVVWRVVGFVSTGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVV+LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVVLLIALASVVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ Y LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARYRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE+  WG   ++  GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTRIQAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|134296585|ref|YP_001120320.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134139742|gb|ABO55485.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 585

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPVS-GAMRFSLPK------VEKKASRTVDIAWAVLVVLATAYIVWRVVSFVATGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +VI LG IT+ RVVVLI IAS++W+P+G+ +G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVIVLGLITLLRVVVLISIASVVWVPIGVLVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|107023335|ref|YP_621662.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116690418|ref|YP_836041.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170733738|ref|YP_001765685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|105893524|gb|ABF76689.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116648507|gb|ABK09148.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169816980|gb|ACA91563.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 585

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|206560942|ref|YP_002231707.1| binding-protein-dependent transport system protein [Burkholderia
           cenocepacia J2315]
 gi|198036984|emb|CAR52905.1| binding-protein-dependent transport system protein [Burkholderia
           cenocepacia J2315]
          Length = 585

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPSGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|154245217|ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159302|gb|ABS66518.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 582

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/576 (55%), Positives = 412/576 (71%), Gaps = 8/576 (1%)

Query: 13  RRIF-PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           RR F PN++D LAF L+ G + +++HG +ET  P   +D+ P++LD   LP+YA RTT+R
Sbjct: 13  RRTFAPNLWDALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYALRTTMR 72

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML+A+V SL+FTF Y  LAAKSRR  MVLVP+LDI+QS+P+LGFL+FTVV FM+L+PG+V
Sbjct: 73  MLAAIVASLVFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSLFPGRV 132

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELAAIFAIFTSQ WNMTFS YQSL  +PRDL+E +RSFRLSGWQ+FW L VPFSMPG
Sbjct: 133 LGVELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVPFSMPG 192

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWN MMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAIKEQ+L A+ +A+L ML V
Sbjct: 193 LVWNTMMSMSGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVLAMLAV 252

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I LYDQLLFRP++ W++KFR+E +       SW+L   R+T   + +         PL  
Sbjct: 253 ILLYDQLLFRPLVAWADKFRVETSASGAAPRSWLLSAARRTYLFQRV-------LQPLGA 305

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +  + R          ++  ++  +   S   +  W  +V  VA    +  + ++    
Sbjct: 306 MLAAVPRQRLAFSAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAFVGTEL 365

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +V  V  LG +TM RV+VLI +A++IW+P+G+WIG RP  + ++QP AQ LAAFPAN
Sbjct: 366 TLPEVTQVFGLGVLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLAAFPAN 425

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP  V  +    L+P++WLS LM+ GTQWYILFNV+AGASAFPND KE AS+F I GW
Sbjct: 426 IIFPFAVVAIVRLGLDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLKEAASTFRIRGW 485

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYYVTGAITA GG+WNASIV+EVASWG   LR  G+GAYIA++T  G 
Sbjct: 486 NWWRKVMLPGIFPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADATAAGD 545

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P +VLGV +M  FV+  NR LW P++ +  R LRL
Sbjct: 546 YPRIVLGVAVMSIFVIFFNRLLWRPMFTFAGRRLRL 581


>gi|254251726|ref|ZP_04945044.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
 gi|124894335|gb|EAY68215.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
          Length = 584

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G IRF  P         ++ S + D  W  VV      + W+   ++    T 
Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V  LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583


>gi|78067194|ref|YP_369963.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77967939|gb|ABB09319.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 585

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPG+G+Y+A AI +++L AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNLGAIGWVILTMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P         ++ S  +DI W  +V      + W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFSLPR------VEKKASRTVDIAWAILVLIGTAYVVWRVVSFVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV VLI IAS+IW+PVG+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVAVLIAIASVIWVPVGVWIGLRPRLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPAFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|254247536|ref|ZP_04940857.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124872312|gb|EAY64028.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 585

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 584


>gi|115352494|ref|YP_774333.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|172061350|ref|YP_001809002.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|115282482|gb|ABI87999.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|171993867|gb|ACB64786.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 585

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/576 (54%), Positives = 411/576 (71%), Gaps = 11/576 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHF 371
            +L  + G +RF  P+        ++ S  +DI W  F ++C     I W+ + ++    
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWSGFVLICTAY--IVWRVVSFVATGV 368

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN
Sbjct: 369 TMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPAN 428

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW
Sbjct: 429 LLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGW 488

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G 
Sbjct: 489 QWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGD 548

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           FP+++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 549 FPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|254254292|ref|ZP_04947609.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
 gi|124898937|gb|EAY70780.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
          Length = 584

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGSAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G IRF  P         ++ S + D  W  VV      + W+   ++    T 
Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V  LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVVVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583


>gi|161524071|ref|YP_001579083.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189351168|ref|YP_001946796.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|221199378|ref|ZP_03572422.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
 gi|221205720|ref|ZP_03578735.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
 gi|221211591|ref|ZP_03584570.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|160341500|gb|ABX14586.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189335190|dbj|BAG44260.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221168952|gb|EEE01420.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|221174558|gb|EEE06990.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
 gi|221180663|gb|EEE13066.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
          Length = 584

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 408/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+GWQ+FW L VPFSMPGLV
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLV 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +   F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  T   +RF  P         ++ S + D+ W  VV      + W+ + ++    T 
Sbjct: 317 LRLSPTRA-MRFTLPR------VEKKASRVADVTWAVVVLLATAYVLWRVMSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI IAS++W+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 DEVGHVFVLGLITLLRVVVLIAIASVVWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA+ T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAQMTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583


>gi|83719463|ref|YP_441452.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|167580221|ref|ZP_02373095.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
 gi|167618330|ref|ZP_02386961.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257139872|ref|ZP_05588134.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|83653288|gb|ABC37351.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 585

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 312/574 (54%), Positives = 404/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQFLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + +AW+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTLYVAWRVFAYVKTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKAQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|167569249|ref|ZP_02362123.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 584

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 77  AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +Q+L A+ + +LTM  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGWVILTMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +  +
Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAK-AARI 315

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S + DI W  +V    I +  +   Y+    T 
Sbjct: 316 PLRVPSLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVFVYVKTGVTL 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   ++  GLGAYIA++T  G +P
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIAQTTAAGDYP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583


>gi|167561998|ref|ZP_02354914.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
          Length = 584

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 77  AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +Q+L A+ + +LTM  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGWVILTMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +  +
Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAK-AARI 315

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S + DI W  +V    I +  +   Y+    T 
Sbjct: 316 PLRVPSLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVFVYVKTGVTL 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   ++  GLGAYIA++T  G +P
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIAQTTAAGDYP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583


>gi|238028311|ref|YP_002912542.1| hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1]
 gi|237877505|gb|ACR29838.1| Hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1]
          Length = 584

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/574 (53%), Positives = 403/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L++ +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V G
Sbjct: 77  AAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGLV
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLV 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + +LTM  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGWVILTMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +   F+ ++   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKMARLP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  +    RF  P         ++ S + DI W  +V      + W+ + ++    T 
Sbjct: 317 FRLP-SFDAARFALPR------VEKQASRVADIGWAILVLLGTAYVVWRVVAFVSTGVTL 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG  T+ RVVVLI+IAS+IW+P+G+WIG RP ++ K QP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ Y LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGI PYY+TGAITA GGAWNASIVSE   WG       GLGAYIA+ T  G +P
Sbjct: 490 WRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIAQMTAAGDYP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW PLY Y    LRL
Sbjct: 550 KIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583


>gi|107025965|ref|YP_623476.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116692851|ref|YP_838384.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170737883|ref|YP_001779143.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|105895339|gb|ABF78503.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116650851|gb|ABK11491.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169820071|gb|ACA94653.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 584

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/575 (53%), Positives = 407/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W     LS  
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWL----LSQA 313

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            +   R   V      E      S +R S + DI W   V  + + +AW+ + ++    T
Sbjct: 314 ARIPLRVPSVTGTRVRE-----ASARRSSRIGDIVWGAFVILLTVYVAWRVVSFVATGVT 368

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 369 VAEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANL 428

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+
Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G F
Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDF 548

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583


>gi|161520447|ref|YP_001583874.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353362|ref|YP_001948989.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344497|gb|ABX17582.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337384|dbj|BAG46453.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 583

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 310/574 (54%), Positives = 402/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I LD  +LP+YA RTTLRML
Sbjct: 17  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+      SW+L L R+T  +  +   +    S  +  V
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIHQLLVPAGWLLSQ-AARV 315

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R L V+R        +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 316 PLRVRALDVMR-------ARDTAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582


>gi|221209695|ref|ZP_03582676.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|221170383|gb|EEE02849.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
          Length = 596

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 308/574 (53%), Positives = 402/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 30  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKISLDPSNLPEYALRTTLRML 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 90  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 150 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 209

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 210 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 269

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E ++      SW+L L R+T  +  +   +    S  +  V
Sbjct: 270 AYDQLLFRPLVAWADKFRMENSSAGDAPQSWLLDLLRRTRAIHQLLVPAGWLLSQ-AARV 328

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R L  +R        +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 329 PLRLRALDAMR-------ARETAQRSPSRFGDFVWAAAVIVLTVYVAARVVSYVSTGVTI 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 382 DDVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 442 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 502 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 562 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 595


>gi|91782448|ref|YP_557654.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91686402|gb|ABE29602.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia xenovorans LB400]
          Length = 583

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/575 (54%), Positives = 405/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +            PL    
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309

Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            K  R  L +  F  P    Q+   Q+ S + DI W  +V    + + ++   Y+    +
Sbjct: 310 AKAARVPLRLPAFQGPR--FQIPQMQKSSRVGDIVWAALVLVTTVYVVYRVFMYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|34499738|ref|NP_903953.1| nitrate ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34105589|gb|AAQ61943.1| probable ABC transporter nitrate permease [Chromobacterium
           violaceum ATCC 12472]
          Length = 564

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/575 (54%), Positives = 415/575 (72%), Gaps = 14/575 (2%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN +DL+AF L++G + +   GI+ET  P   +   PI+L+  +LP+YA RTTLRML+
Sbjct: 1   MIPNRWDLIAFPLILGFLLMATTGIRETWAPITALQTAPISLEPGNLPEYALRTTLRMLA 60

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM  SL FT VY TLAAKSRR G++LVPILDI+QS+P+LG+++FTV +F+ L+PG+V+GA
Sbjct: 61  AMAASLAFTLVYGTLAAKSRRAGLLLVPILDILQSVPVLGYISFTVTFFLALFPGRVLGA 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNMTFS YQSL  +PRDL+EVS + RL+ WQKFW L VP++MPG++W
Sbjct: 121 EFAAIFAIFTSQAWNMTFSFYQSLRTVPRDLQEVSVNLRLTAWQKFWKLEVPYAMPGMIW 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFFVVASE I VGD  + LPG+GSY+ALAI+ +DL A+ + +LTM  VI +
Sbjct: 181 NMMMSMSGGWFFVVASEAITVGDKTVMLPGVGSYLALAIQHKDLAAVGWVILTMSVVILI 240

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQ LFRP++ W++KFRLE T      +SWVL L ++T F++           P      
Sbjct: 241 YDQFLFRPLVAWADKFRLEDTASQNAPESWVLNLIQRTRFIQ-------QLLKPFG---- 289

Query: 315 KLCRTLGVIRFH--FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           KL +T   +R +   P+  L   ++  VS  +D+ W+ +V  +A+  A + + +I     
Sbjct: 290 KLLKTAARLRLNISLPKG-LHSEAHTPVSRGIDVLWWALVGLIAVAAASKLVHFIATEVG 348

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +VL V  LG +T+ RV +LI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+
Sbjct: 349 AWEVLKVFGLGLVTLVRVSLLIAIASLIWVPLGVLIGLRPALAEKVQPLAQFLAAFPANL 408

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +++Y LNP++WLS L++ GTQWYILFNVIAGA+AFPNDFKE A++F I GW+
Sbjct: 409 LFPVFVIVIAHYKLNPDIWLSPLIVLGTQWYILFNVIAGATAFPNDFKEAAANFRIRGWQ 468

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR ++LPGIFPYYVTGAITA GGAWNASIVSE  SWG   L   GLGAYIA++T  G +
Sbjct: 469 WWRKVMLPGIFPYYVTGAITASGGAWNASIVSEFVSWGDDKLAAHGLGAYIAQTTAAGDY 528

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV+  NR LW P+Y      LRL
Sbjct: 529 PKILLGIAVMSLFVVLFNRLLWRPMYAIAENKLRL 563


>gi|254250281|ref|ZP_04943601.1| ABC-type anion transport system, duplicated permease component
           [Burkholderia cenocepacia PC184]
 gi|124876782|gb|EAY66772.1| ABC-type anion transport system, duplicated permease component
           [Burkholderia cenocepacia PC184]
          Length = 584

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/577 (53%), Positives = 409/577 (70%), Gaps = 14/577 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W     LS  
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWM----LSQA 313

Query: 313 VKKLCR--TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
            +   R  +L   R H         S +R S + DI W   V  + + +AW+ + ++   
Sbjct: 314 ARIPLRVPSLTGTRVHG-------ASARRSSRIGDIVWGVFVILLTVYVAWRVVSFVATG 366

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T  +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA
Sbjct: 367 VTMAEVGHVLVLGLITLLRVLVLIAIASMIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPA 426

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I G
Sbjct: 427 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 486

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G
Sbjct: 487 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAG 546

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 547 DFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583


>gi|172063625|ref|YP_001811276.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171996142|gb|ACB67060.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 584

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 305/575 (53%), Positives = 404/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W         
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           ++   R     R           S +  S + DI W   V  + + + W+ +G++    T
Sbjct: 318 LRAPSRNGAPSR---------AASARGSSRLGDIVWGTFVILITVYVGWRVVGFVATGVT 368

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             DV +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 369 MGDVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANL 428

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+
Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G F
Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583


>gi|254181361|ref|ZP_04887958.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184211899|gb|EDU08942.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 585

 Score =  625 bits (1611), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAVAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|296159051|ref|ZP_06841878.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890612|gb|EFG70403.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 583

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 311/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +            PL    
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309

Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            K  R  L +  F  P    Q+   Q+ S + DI W  +V    + + ++ + Y+    +
Sbjct: 310 AKAARVPLRLPAFQGPR--FQIPQMQKSSRVGDIAWAALVLVTTVYVVYRVVMYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|187923127|ref|YP_001894769.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714321|gb|ACD15545.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 583

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 310/575 (53%), Positives = 405/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICVIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +            PL    
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309

Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            K  R    +  F  P    Q+   Q+ S + D+ W  +V    + + ++ + Y+    +
Sbjct: 310 AKAARVPFRLPAFQGPR--FQIPQMQKSSRVGDMVWAALVLLATVYVVYRVVIYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVVVLI IAS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIAIASVIWVPVGVLIGLRPALAEKIQPIAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|53718680|ref|YP_107666.1| putative ABC transporter membrane protein [Burkholderia
           pseudomallei K96243]
 gi|53725139|ref|YP_102518.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|67639868|ref|ZP_00438698.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76811263|ref|YP_332667.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|124384265|ref|YP_001028971.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126441907|ref|YP_001058148.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126449210|ref|YP_001081114.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126453617|ref|YP_001065383.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|134281122|ref|ZP_01767831.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|166999929|ref|ZP_02265758.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|167718626|ref|ZP_02401862.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
 gi|167737653|ref|ZP_02410427.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167814788|ref|ZP_02446468.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167823241|ref|ZP_02454712.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167851450|ref|ZP_02476958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167908611|ref|ZP_02495816.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|217420250|ref|ZP_03451756.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|226194385|ref|ZP_03789983.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811368|ref|YP_002895819.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242315247|ref|ZP_04814263.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254178013|ref|ZP_04884668.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254190761|ref|ZP_04897268.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254199428|ref|ZP_04905794.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254205743|ref|ZP_04912095.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254258247|ref|ZP_04949301.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254298312|ref|ZP_04965764.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|254357899|ref|ZP_04974172.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|52209094|emb|CAH35035.1| putative ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
 gi|52428562|gb|AAU49155.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|76580716|gb|ABA50191.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|124292285|gb|ABN01554.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126221400|gb|ABN84906.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126227259|gb|ABN90799.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|126242080|gb|ABO05173.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134247428|gb|EBA47513.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|147749024|gb|EDK56098.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147753186|gb|EDK60251.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148027026|gb|EDK85047.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|157808237|gb|EDO85407.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157938436|gb|EDO94106.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160699052|gb|EDP89022.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|217397554|gb|EEC37570.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|225933470|gb|EEH29459.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506027|gb|ACQ98345.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238520476|gb|EEP83936.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242138486|gb|EES24888.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|243064050|gb|EES46236.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|254216936|gb|EET06320.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 585

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 311/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|330817956|ref|YP_004361661.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3]
 gi|327370349|gb|AEA61705.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3]
          Length = 584

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/580 (52%), Positives = 401/580 (69%), Gaps = 19/580 (3%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L++ +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V G
Sbjct: 77  AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGLV
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKLEVPFSMPGLV 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI ++++ AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +            P    +
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIH-------QLLVPAGWLL 309

Query: 314 KKLCR------TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            +  R      +    RF  P         ++ S   DI W  +V      + W+ + ++
Sbjct: 310 ARAARLPFRLPSFDAARFALPR------VEKQASRAADIGWAILVLIGTAYVVWRVVSFV 363

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               T  +V +V  LG  T+ RV+VLI IAS++W+P+G+WIG RP ++ K QP AQ LAA
Sbjct: 364 ATGVTLAEVGHVFLLGLATLLRVLVLIAIASLVWVPIGVWIGLRPALAEKAQPIAQFLAA 423

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F 
Sbjct: 424 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 483

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE+  WG   ++  GLGAYI+E T
Sbjct: 484 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTKIQAHGLGAYISEMT 543

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G +P++++G+ +M  FV   NR LW PLY Y    LRL
Sbjct: 544 AAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583


>gi|323525236|ref|YP_004227389.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323382238|gb|ADX54329.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 583

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 312/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAAAITEKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  + R +    W F    +  
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V      L   RF  P+        Q+ S + DI W  +V    + + ++   Y+    +
Sbjct: 315 VPFRLPALQGPRFPIPQ-------MQKSSRVGDIVWGALVLLGTVYVVYRVFIYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVGHVFLLGLITLLRVVLLIALASVIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIVIVRFHLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRVAAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|221195992|ref|ZP_03569039.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221202666|ref|ZP_03575685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221176600|gb|EEE09028.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221182546|gb|EEE14946.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 583

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I LD  +LP+YA RTTLRML
Sbjct: 17  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            NMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 197 RNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+      SW+L L R+T  +            P    +
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  R    +R  F     +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 310 SQAARVPLRVR-AFDAMRAREKAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     + P D +E +++FR+ GWQ +    +P   P  V   + +  G W   
Sbjct: 457 WYILFNVIAGATSYPNDYKEATKNFRIRGWQWWRQAMLPGIFPYYVTGAITASGGAWNAS 516

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+G+YIA      D   I+  +  M   + L+++LL+RPM  ++
Sbjct: 517 IVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 576

Query: 268 -NKFRLE 273
            ++ RL+
Sbjct: 577 ESRLRLD 583


>gi|115358889|ref|YP_776027.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284177|gb|ABI89693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 584

 Score =  622 bits (1604), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 304/575 (52%), Positives = 406/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W     LS  
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWL----LSQT 313

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            +   R   +          +  S +  S + DI W   V  + + +AW+ + ++    T
Sbjct: 314 ARIPLRAPSLAGARS-----RAASVRGSSRIGDIVWGTFVILITVYVAWRVVSFVATGVT 368

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 369 MDEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANL 428

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+
Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G F
Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     + P D +E +++FR+ GWQ +    +P   P  V   + +  G W   
Sbjct: 458 WYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 517

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+GSYIA      D   I+  +  M   + L+++LL+RPM  ++
Sbjct: 518 IVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 577

Query: 268 -NKFRLE 273
            ++ RL+
Sbjct: 578 ESRLRLD 584


>gi|134293957|ref|YP_001117693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134137114|gb|ABO58228.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 584

 Score =  621 bits (1602), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 302/575 (52%), Positives = 403/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L  PFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEAPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNLAAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQLLFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W         
Sbjct: 258 AYDQLLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARVP 317

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           ++    TL   R        ++          D+ W  VV  + + +AW+ +G++    T
Sbjct: 318 LRAPSVTLARSRGKSSRRSSRVG---------DLVWAAVVIALTLYVAWRVVGFVATGVT 368

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 369 LAEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANL 428

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+
Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G F
Sbjct: 489 WWRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583


>gi|167918066|ref|ZP_02505157.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 585

 Score =  621 bits (1602), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/574 (53%), Positives = 404/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM  +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|167900084|ref|ZP_02487485.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
 gi|167916728|ref|ZP_02503819.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|254196166|ref|ZP_04902590.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|169652909|gb|EDS85602.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 585

 Score =  621 bits (1602), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 310/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|307728994|ref|YP_003906218.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583529|gb|ADN56927.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 583

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 312/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKNQTISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAITEKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  + R +    W F    +  
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V      L   RF  P    Q+  + RV    DI W  +V    + + ++   Y+    +
Sbjct: 315 VPLRMPALQGPRFQIP----QIQKSSRVG---DIVWGALVLIGTVYVVYRVFMYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVGHVFLLGLITLLRVVLLIALASLIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIAIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAARNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVVAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582


>gi|170691899|ref|ZP_02883063.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143183|gb|EDT11347.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 583

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/575 (54%), Positives = 405/575 (70%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI  ++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAIVVKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  + R +    W F    +  
Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V      L   RF  P+        Q+ S + DI W  +V    + + ++   Y+    +
Sbjct: 315 VPFRLPALQAPRFPIPQ-------IQKSSRIGDIVWGALVLVATVYVVYRVFIYVRTGVS 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 368 LDEVGHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIVIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +
Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|121599465|ref|YP_992337.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|121228275|gb|ABM50793.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
          Length = 585

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 310/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +L +YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLLEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+  +
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|295675893|ref|YP_003604417.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295435736|gb|ADG14906.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 583

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/575 (53%), Positives = 409/575 (71%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ ++PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLAMFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  + R +    W F    +  
Sbjct: 257 AYDQLLFRPLVAWADKFRMEFTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAR--AAR 314

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V+         RFH P+       +++ S + DI W  +V    + + ++   Y+    T
Sbjct: 315 VRFQLPAFSAPRFHIPQ-------SEKNSKLGDIIWAAIVLLATVYVVYRVFLYVRTGVT 367

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++ +V  LG +T+ RVVVLI IAS+IW+PVG+ IG RP ++ K+QP AQ LAAFPAN+
Sbjct: 368 LDEIGHVFLLGLVTLLRVVVLIAIASVIWVPVGVLIGLRPALAEKVQPLAQFLAAFPANL 427

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGAS++PND++E A +FHI GW+
Sbjct: 428 LFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAAKNFHIRGWQ 487

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   L   GLGAYIA++T  G +
Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRLAAHGLGAYIAQTTAAGDY 547

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 582


>gi|327396383|dbj|BAK13805.1| glycine betaine/L-proline transport system permease protein ProW
           [Pantoea ananatis AJ13355]
          Length = 578

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 301/575 (52%), Positives = 406/575 (70%), Gaps = 9/575 (1%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+ PN++D +AF L+I +I ++  G  +T +P D +    I+LD  +LP+YA RTTLR
Sbjct: 11  NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML AM+ SL+F+ +Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V
Sbjct: 71  MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELAAIFA+FTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L  PF++PG
Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWNMMMSMSGGWFF+VASE I VG+    LPG+G Y+A AI  +D+ A+ + +LTM+ V
Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I  YDQLLFRP++ W++KFR+E T       SWV  L R+T  +  I ++          
Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +     T   +RF   EN     + +R S + DI W   V  + + + ++ I Y+    
Sbjct: 310 RISWRWPTAAPVRF---EN-----NTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +V +V  LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN
Sbjct: 362 TLDEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW
Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G 
Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           FP+++LG+ +M  FV   NR LW PLY+Y     R
Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576


>gi|288961668|ref|YP_003451978.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
 gi|288913948|dbj|BAI75434.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
          Length = 586

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 301/582 (51%), Positives = 407/582 (69%), Gaps = 24/582 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A  LVIG++ +L  G  +  +P   ++ VPITLD   LP+YA R+TLRML+AM
Sbjct: 17  PNRWDVVALPLVIGLLALLAIGGHQMALPLGSIEEVPITLDPWMLPEYALRSTLRMLAAM 76

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTF YATLAAKSRR GM+L+P+LD++QS+P+LG+++FTVV+F++L+PG V+GAE 
Sbjct: 77  AASLLFTFTYATLAAKSRRAGMLLIPVLDVLQSVPVLGYISFTVVFFLSLFPGSVLGAEC 136

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS YQSL  +PRDL+E +  F  SGWQ+FW L  P++ PGLVWNM
Sbjct: 137 AAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEAATGFGFSGWQRFWTLEAPYAAPGLVWNM 196

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VGD  I LPGIGSY+A AI  Q L A+ +A+L ML VI  YD
Sbjct: 197 MMSMSGGWFFVVASEAITVGDKTITLPGIGSYLAKAIDGQRLDAVGWAVLAMLLVILAYD 256

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR+E T      +SW+L LF++T F R I       F+P  + + +L
Sbjct: 257 QLLFRPLVAWADKFRVELTGAQEVPESWLLTLFQRTRFFRAI-------FAPFDSLLGRL 309

Query: 317 CRTLGVIRFHFPENFLQLCS-----------NQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
                 I    P   L   +           ++  +  +D+ W+ ++    +   W  + 
Sbjct: 310 ------IWLRLPTGGLGRGAAGGLRSVGGLLDRVPARAVDMGWYLLLAVTGLWAGWSMVV 363

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +I +   + DV  V+ LG  T+ RV+VLI +A+++W+P+G+ IG RP ++ K+QP AQ L
Sbjct: 364 FIASGVAWGDVGTVLLLGGATLLRVLVLIALATLVWVPLGVLIGLRPRLAEKVQPVAQFL 423

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AAFPAN+ FP+ V  +  + LNP++WLS LMI GTQWYILFNV+AGA+AFP+D KE A++
Sbjct: 424 AAFPANLLFPVAVVVIVRFDLNPDIWLSPLMILGTQWYILFNVVAGATAFPSDLKEAAAN 483

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F I GW+WWR ++LPG+FPYYVTGA+TA GG+WNASIV+E  +WG   L   GLG+YIA+
Sbjct: 484 FRIRGWQWWRDVMLPGVFPYYVTGAVTASGGSWNASIVAEAVNWGDTQLTAHGLGSYIAQ 543

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +T  G +P +VLG+ +M  FV+  NR LW PLY +  R LRL
Sbjct: 544 ATTAGDYPRIVLGIAVMSLFVILFNRLLWRPLYAFAERRLRL 585


>gi|291616142|ref|YP_003518884.1| ProW [Pantoea ananatis LMG 20103]
 gi|291151172|gb|ADD75756.1| ProW [Pantoea ananatis LMG 20103]
          Length = 578

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 301/575 (52%), Positives = 406/575 (70%), Gaps = 9/575 (1%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+ PN++D +AF L+I +I ++  G  +T +P D +    I+LD  +LP+YA RTTLR
Sbjct: 11  NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML AM+ SL+F+ +Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V
Sbjct: 71  MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELAAIFA+FTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L  PF++PG
Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWNMMMSMSGGWFF+VASE I VG+    LPG+G Y+A AI  +D+ A+ + +LTM+ V
Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I  YDQLLFRP++ W++KFR+E T       SWV  L R+T  +  I ++          
Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +     T   +RF   EN     + +R S + DI W   V  + + + ++ I Y+    
Sbjct: 310 RISWRWPTAAPVRF---EN-----NTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +V +V  LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN
Sbjct: 362 TLNEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW
Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G 
Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           FP+++LG+ +M  FV   NR LW PLY+Y     R
Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576


>gi|241761115|ref|ZP_04759204.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241374734|gb|EER64195.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 584

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 306/580 (52%), Positives = 402/580 (69%), Gaps = 13/580 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++T     +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIK----------- 303

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366
            LS     + + L +IRF   EN +   ++   S + D  W FCV+  +  G  W +  Y
Sbjct: 304 RLSTPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWG-GWVTFDY 362

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LA
Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLIMLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + +
Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +
Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T  G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|311279626|ref|YP_003941857.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308748821|gb|ADO48573.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 608

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/578 (52%), Positives = 404/578 (69%), Gaps = 14/578 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R + PN +D++AF L+I +I +++ G  +T +P   +    I+LD  +LP+YA RTTLRM
Sbjct: 41  RHLKPNRWDIVAFPLIICLIAMMVTGFNQTMMPIVSLKTQTISLDPANLPEYALRTTLRM 100

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L AM+ +LLFT VY TLAA+SRR   +L+PILDI+QS+P+LG+++FTV +F+ L+PG+V+
Sbjct: 101 LVAMIAALLFTLVYGTLAARSRRAEKILIPILDILQSVPVLGYISFTVTFFIALFPGRVL 160

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G ELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPF+MPGL
Sbjct: 161 GVELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLVEVSRGFHLTPWQRFWKLDVPFAMPGL 220

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFF+VASE I VG+    LPGIG+Y+A AI  +++ AI + +L M  VI
Sbjct: 221 IWNMMMSMSGGWFFIVASEAITVGNNTFTLPGIGAYLAQAILSKNMHAIGWVLLAMTLVI 280

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
             YDQLLFRP++ W++KFR+E T       SWVL L R+T  +           SP    
Sbjct: 281 LAYDQLLFRPLVAWADKFRMENTRSGSAPTSWVLNLIRRTRLIH-------RLLSPFGFL 333

Query: 313 VKKLCRTLGVIRFHFPENFLQLC---SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + R    I  H P          S +R+S ++DI W  +V  +A+ +AW+ I Y+  
Sbjct: 334 LSGMAR----IPLHVPLPHWGAASPRSARRLSRVVDILWGTLVILLALYVAWRVISYVSA 389

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             +  +V +V  LG  T+ RV VLI+I+S++W+P+G+ IG RP ++ KIQP AQ LAAFP
Sbjct: 390 GVSLSEVGHVFLLGFATLLRVSVLILISSLVWVPLGVMIGMRPALAGKIQPIAQFLAAFP 449

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN+ FP+ V  + ++ LNPN+WLS L++ GTQWYILFNV+AG SA PND++E A++FHI 
Sbjct: 450 ANLLFPIFVITIVHFQLNPNIWLSPLIVLGTQWYILFNVVAGTSAIPNDYREAAANFHIR 509

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW+WWR ++LPGIFPYY+TGAITA GGAWNASIV+E   WG   L   G+GAYIA++T  
Sbjct: 510 GWQWWREVMLPGIFPYYITGAITASGGAWNASIVAEFVQWGDTQLTAYGIGAYIAKTTAA 569

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G FP+++LGV +M  FV   NR LW PLY Y     R+
Sbjct: 570 GDFPKIILGVAVMSLFVTLFNRLLWRPLYAYAESRFRI 607


>gi|114326819|ref|YP_743976.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114314993|gb|ABI61053.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 574

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/584 (53%), Positives = 408/584 (69%), Gaps = 18/584 (3%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
            + P   SRR  PN+FDL++  +V   +  ++H  + T VP D      ++LD  +LP Y
Sbjct: 4   TVFPALASRRRLPNLFDLVSIAVVFAALVAVVHVTRGTLVPLDDRYAHAVSLDPWNLPAY 63

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML A+  +L FTF YAT AAKSRR  M+L+P+LDI+QS+PILGFLTFTVV+FM
Sbjct: 64  AFRTTLRMLLALAAALFFTFTYATWAAKSRRAAMLLIPMLDILQSVPILGFLTFTVVFFM 123

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+PG+V+GAELA+IFAIFTSQ WNM FS YQSL  +P DL E +R+FRLS WQ+FW L 
Sbjct: 124 NLFPGQVLGAELASIFAIFTSQAWNMAFSFYQSLTTLPGDLVEATRAFRLSPWQRFWKLE 183

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPF+MPGLVWN MMSMSGGWFFVVASE + VGD    LPGIGSY+ALA+++QD+ AI YA
Sbjct: 184 VPFAMPGLVWNAMMSMSGGWFFVVASEAVSVGDNTWMLPGIGSYVALALRQQDMAAIGYA 243

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF---IGYS 301
           +L M  VI LYDQLLFRP++ WS KFR E T G    + W+L L R+T +LR    +  S
Sbjct: 244 ILAMAVVILLYDQLLFRPLVAWSEKFRFETTQGSTSEEPWLLRLLRRTAWLRAGSELLAS 303

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
            +N F+ L             I F  P   L   SNQ  S ++D+ W  +V  + +  AW
Sbjct: 304 GFNAFTNLR------------IGFRLPR--LIRASNQP-SRIVDMLWGLIVFAMLVWCAW 348

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
               ++       DVL  + +GCITM RV+VL+I+A++IW+P+G+ IG RPH++  +QP 
Sbjct: 349 HIYAFLSGRIAPSDVLQAVLMGCITMLRVIVLMIVATLIWVPIGVAIGLRPHVARFVQPL 408

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q LAAFPAN+FFPL V  ++ + LNP++WL+ LMI G QWYI+FNVIAGA+AFP D +E
Sbjct: 409 VQFLAAFPANLFFPLFVLVIARFSLNPDIWLTPLMILGAQWYIMFNVIAGAAAFPGDMQE 468

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A  FHI G+ WWR +ILPGIFPYY+TGAITA GGAWNA+IVSEV +WG   L+  GLG 
Sbjct: 469 AARGFHIRGFLWWRRVILPGIFPYYITGAITASGGAWNAAIVSEVVTWGPNTLQAHGLGR 528

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +IA+++  G++P  +LGV +M  FV+  NR LW PL+ + TR L
Sbjct: 529 FIADASADGNWPRTILGVAVMSAFVVGFNRALWKPLFNFATRRL 572


>gi|206563802|ref|YP_002234565.1| ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039842|emb|CAR55817.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315]
          Length = 584

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/577 (52%), Positives = 404/577 (70%), Gaps = 14/577 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +            P    +
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLVPAGWLL 310

Query: 314 KKLCRTLGVIRFHFPE---NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
            +  R    I    P      ++  S++R S + DI W   V  + + + W+ + ++   
Sbjct: 311 SQAAR----IPLRVPSLAGTRVRGASSRRSSRIGDIVWGAFVIALTLYVVWRVVSFVATG 366

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T  +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA
Sbjct: 367 VTMGEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPA 426

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I G
Sbjct: 427 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 486

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+WWR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G
Sbjct: 487 WQWWRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAG 546

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 547 DFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583


>gi|78061821|ref|YP_371729.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. 383]
 gi|77969706|gb|ABB11085.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. 383]
          Length = 583

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 304/577 (52%), Positives = 403/577 (69%), Gaps = 14/577 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +            P    +
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLVPAGWLL 309

Query: 314 KKLCRTLGVIRFHFPE---NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
            +  R    I   FP       +  S++  S + DI W   V  + + + W+ + ++   
Sbjct: 310 SQAAR----IPLRFPSMKGTRARGASSRSSSRIGDIVWGTFVILLTVYVVWRVVTFVATG 365

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T  +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA
Sbjct: 366 VTMGEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPA 425

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I G
Sbjct: 426 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 485

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G
Sbjct: 486 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAG 545

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 546 DFPKIILGIAVMSLFVTLFNRVLWRPMYAYAESRLRL 582


>gi|283856284|ref|YP_162306.2| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775280|gb|AAV89195.2| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 584

 Score =  612 bits (1578), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 305/580 (52%), Positives = 401/580 (69%), Gaps = 13/580 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++      +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSASKEKVNSWVYDIIRHTRLIK----------- 303

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366
            LS     + + L +IRF   EN +   ++   S + D  W FCV+  +  G  W +  Y
Sbjct: 304 RLSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWG-GWVTFDY 362

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LA
Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + +
Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +
Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T  G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|260752921|ref|YP_003225814.1| binding-protein-dependent transporters inner membrane component
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258552284|gb|ACV75230.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 584

 Score =  612 bits (1578), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 305/580 (52%), Positives = 401/580 (69%), Gaps = 13/580 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++T     +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIK----------- 303

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366
            LS     + + L +IRF   EN +   ++   S + D  W  CV+  +  G  W +  Y
Sbjct: 304 RLSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGLCVLSAILWG-GWVTFDY 362

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LA
Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + +
Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +
Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T  G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|222081809|ref|YP_002541174.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726488|gb|ACM29577.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 586

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 305/575 (53%), Positives = 397/575 (69%), Gaps = 11/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI PN +DL+AF  V  +  + +HG  E   P D +   PI+LD   LP+YA RTTLRM 
Sbjct: 21  RILPNGYDLVAFAFVAALAVLAVHGAAEMRAPLDGLANAPISLDPARLPEYALRTTLRMF 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SL+FTFV+ATLAAKSRR  M+++P LDI+QS+P+LGFLTFTV +FM ++PG  +G
Sbjct: 81  AAIGASLVFTFVFATLAAKSRRAEMIIIPALDILQSVPVLGFLTFTVTFFMGIFPGSQLG 140

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AE A++FAIFTSQ WNM FS YQSL  +PRDL+EVSR F LS WQ+FW L  PFS PGL+
Sbjct: 141 AECASVFAIFTSQAWNMAFSFYQSLRTVPRDLDEVSRGFGLSAWQRFWRLEAPFSAPGLI 200

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMSMSGGWFFVVASE I VG+T + LPG+GS++A+AI +QD  A+ +A+L M  VI 
Sbjct: 201 WNTMMSMSGGWFFVVASEAITVGNTTVQLPGLGSWLAVAIDKQDFAAVSWAVLAMGVVIV 260

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSPLSNN 312
           LYDQLLFRP++ W++KFR E+T G     SWV  L ++T  L+  +G  +W + S +   
Sbjct: 261 LYDQLLFRPIVAWADKFRFEQTAGQEKPRSWVYSLIQRTRLLKCLMGPLAWAWGSLMLVR 320

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  + R   V+R +          N   + MLD  WF ++ G+ I   W +  ++    T
Sbjct: 321 LPAMPRKAPVVRHN----------NAVATRMLDYAWFVLIAGIGIWGIWTAFAFVSQTLT 370

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D       G +T+ RV+VLI +AS+IW+P+G+WIG RP ++ ++QP AQ LAAFPANV
Sbjct: 371 WSDAWEAFSGGLVTLLRVLVLIAVASVIWVPIGVWIGLRPAVAERVQPVAQFLAAFPANV 430

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP  V  +     +PN+WLS LM+ GTQWYILFNVIAGASAFP D KE  S + +  W 
Sbjct: 431 LFPFAVIAIVATGASPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEACSVYQLRSWT 490

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  ILPGIFPYYVTGA+TA GG+WNASIV+EV SWGH  L   GLG+YIA++TE G +
Sbjct: 491 WWRRAILPGIFPYYVTGALTASGGSWNASIVAEVVSWGHTKLEAFGLGSYIAKATEAGDY 550

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             V+LG+ +M  FV  LNR LW PLY++  R LRL
Sbjct: 551 QRVILGIAVMSLFVTLLNRTLWRPLYVFAERRLRL 585


>gi|312115324|ref|YP_004012920.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220453|gb|ADP71821.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 583

 Score =  602 bits (1552), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 305/574 (53%), Positives = 391/574 (68%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           + +PN +D++ F+ +  ++  + HG +    P   +   P++LD  +LPQYA  TTLRM 
Sbjct: 21  QAWPNRYDVVVFLALGAVLVAMAHGAKTMQQPLTGLAANPVSLDPANLPQYALLTTLRMF 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SLLFTF+ A LAAKSR+   V++P LDI+QS+P+LGFLTFTVV+F+NL+PG  IG
Sbjct: 81  AALGFSLLFTFIVAPLAAKSRKAERVIIPALDILQSVPVLGFLTFTVVFFLNLFPGSQIG 140

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDLEEV+  FRL+ WQ+FW L VPF+ PGLV
Sbjct: 141 AELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLEEVTEQFRLTPWQRFWKLEVPFATPGLV 200

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VGDT I LPGIGSYIALAI+++++ A+ +A+  M  VI 
Sbjct: 201 WNMMMSMSGGWFFVVASEAISVGDTTITLPGIGSYIALAIEQKNIGAVAWAVGAMGVVIV 260

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           LYDQLLFRP++ WS+KFR+E      P +SWVL L R+T  ++ +              V
Sbjct: 261 LYDQLLFRPIVAWSDKFRVELVASQNPPESWVLNLLRRTRLIQAVNGLLGRIAGLFGGGV 320

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R       H PE  +   + + +  + +I    VV   A  I      Y+     +
Sbjct: 321 STLSR-------HAPEPRIGKTAGRALDILFNIVLAAVVVWAAWSI----YSYVRATLGW 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV+  +  GCIT  RV+VLI IAS+IW+PVG++IG RP ++ +IQP AQ LAAFPANV 
Sbjct: 370 SDVVQAVTDGCITFVRVMVLIAIASLIWVPVGVYIGLRPKLAERIQPLAQFLAAFPANVL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP VV  +  + L+PN+WLS L+I GTQWYILFNVIAGAS FP D  E +  + + GW W
Sbjct: 430 FPFVVMGIVAWKLDPNIWLSPLIILGTQWYILFNVIAGASVFPRDLGEASELYRLKGWLW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR ++LP I PYYVTGA+TA GG+WNASIV+E  SWG   +   GLGAYIA++T  G F 
Sbjct: 490 WRKVMLPSILPYYVTGALTASGGSWNASIVAEAVSWGDTKVEAQGLGAYIADATAAGDFH 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            VVLGV +M  FV+ALNR LW  LY Y  R LR+
Sbjct: 550 RVVLGVGVMSVFVVALNRVLWRRLYAYADRRLRI 583


>gi|186476907|ref|YP_001858377.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184193366|gb|ACC71331.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 584

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/575 (53%), Positives = 402/575 (69%), Gaps = 10/575 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +   PI+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPISTLQNAPISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRAGQVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVS+ F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSKGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPG+GSY+A AI E++L AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGMGSYLAQAIAEKNLHAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  + R +    W F    +  
Sbjct: 258 AYDQFLFRPLVAWTDKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPIGWMFAK--AAR 315

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V      +G +RF  P          + S   DI W  +V  V   + ++ + Y+    T
Sbjct: 316 VPIRWPRVGPVRFAKP-------VEHKPSKTGDIVWSVIVMLVTAFVVYRVVAYVRTGVT 368

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG +T+ RV +LI +AS++W+PVG+ IG RP ++ K+QP AQ LAAFPAN+
Sbjct: 369 LDEVGHVFVLGLLTLLRVTLLIALASVVWLPVGVLIGLRPALAEKVQPLAQFLAAFPANL 428

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP  V  +  + LNP++WLS L++ GTQWYILFNVIAGASA+PND+KE A +F I GW+
Sbjct: 429 LFPAFVLVIVRFDLNPDIWLSPLIVLGTQWYILFNVIAGASAYPNDYKEAAKNFRIRGWQ 488

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR  +LPG+FPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ T  G +
Sbjct: 489 WWRQAMLPGVFPYYVTGAITASGGAWNASIVAEAVQWGDTKVAAHGLGAYIAQYTAAGDY 548

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 549 PKIILGIAVMSLFVSLFNRVLWRPLYAYAESRLRL 583


>gi|188591808|ref|YP_001796407.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis]
 gi|170939203|emb|CAP64246.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 578

 Score =  598 bits (1542), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/579 (53%), Positives = 407/579 (70%), Gaps = 11/579 (1%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +RR+ PN +D +A  L+IG++ +   GI+ET  P        I+LD   LP+YA RT
Sbjct: 10  PGTARRLLPNRWDFIALPLIIGLLVVAASGIRETLAPLAGPSAEAISLDPAMLPEYALRT 69

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TLRML+A+  SLLFTF Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTVV+F+ L+P
Sbjct: 70  TLRMLAALAASLLFTFTYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVVFFLALFP 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+++GAELAAIFAIFTSQ WNMTFS YQSL  +P DL EVS S RL+ WQKFW L VPF+
Sbjct: 130 GRMLGAELAAIFAIFTSQAWNMTFSFYQSLRTLPPDLIEVSNSMRLTPWQKFWKLEVPFA 189

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MPGL+WNMMMSMSGGWFFVVASE I VGD  I LPG+G+++A AI + ++ A+ + +L M
Sbjct: 190 MPGLIWNMMMSMSGGWFFVVASEAITVGDKSITLPGVGAFLATAIADSNMAAVGWVILAM 249

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           + VI LYDQ LFRPM+ W+++FRLE T+      SWVL L  +T+ ++            
Sbjct: 250 IAVIVLYDQFLFRPMVAWADRFRLESTSAQTAPQSWVLNLVHRTHLIQ-----------S 298

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L     +L R L   RF              ++ ++D+ W  +V  +A  + W+++ Y+ 
Sbjct: 299 LLRTFGRLLRKLARARFAVQLPAASGPQRAGLARVVDVVWSLLVAVLAGYLLWRTVSYVH 358

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 +V+ VI LG +T+ RV+VLI++ S+IW+PVG+ IG RP ++ KIQP AQ LAAF
Sbjct: 359 TEAGLDEVVKVIGLGLLTLLRVLVLIVLTSLIWVPVGVMIGLRPRLAEKIQPLAQFLAAF 418

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+ FP+ V  + ++HLNP++WLS L++ G QWYILFNVIAGA+AFPNDF+E A++F I
Sbjct: 419 PANLLFPVFVFGIVHFHLNPDIWLSPLIVLGVQWYILFNVIAGATAFPNDFREAATNFRI 478

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            GW+WWR I+LPGIFPYYVTGAITA GGAWNASIVSE  SWG   L   GLGAYIA+ST 
Sbjct: 479 RGWQWWRQIMLPGIFPYYVTGAITASGGAWNASIVSEAVSWGSTSLSAHGLGAYIAQSTA 538

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G +P++VLG+ +M   V+  NRFLW PLY      LR+
Sbjct: 539 AGDYPKIVLGIAVMSIMVVCFNRFLWRPLYAIAESKLRM 577


>gi|217976878|ref|YP_002361025.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502254|gb|ACK49663.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 578

 Score =  595 bits (1533), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 290/577 (50%), Positives = 393/577 (68%), Gaps = 10/577 (1%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + R+  PN +DLL   L+      + H     T+P    +    +LD   LP YA RTTL
Sbjct: 11  LGRKALPNQYDLLGLGLIFSAFIAIAHFSHGLTLPIAAPNSTVTSLDYAGLPYYAMRTTL 70

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +AM  SLLFTF YATLAAKSRR  +VL+P+LDI+QS+PILGFL+FTV +F+ L+PG 
Sbjct: 71  RMFAAMAASLLFTFTYATLAAKSRRAELVLIPLLDILQSVPILGFLSFTVTFFLGLFPGS 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNM FS YQSL ++PRDL EV+  F+LSGWQ+FW L  PF+MP
Sbjct: 131 ILGVECAAIFAIFTSQAWNMAFSFYQSLRSVPRDLVEVASGFQLSGWQRFWQLEAPFAMP 190

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GL+WNMMMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAI+++ + A+  A++TM  
Sbjct: 191 GLIWNMMMSMSGGWFFVVASEAISVGDTTIKLPGVGSYLALAIEQKRIDAVFAAVVTMAI 250

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
           VI  YDQLLFRP++ + ++FR+E + G   + S+V  LF +T++LR +     + F   +
Sbjct: 251 VILAYDQLLFRPLVAFGSRFRVELSAGQSQSRSFVRDLFLRTHWLRALTRPPSDLFQSFA 310

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
               +L R+          +  +   +  +S ++DI WF  +  +     W+ + Y+   
Sbjct: 311 LWRLELRRS----------HKFKPAPDPALSRLVDILWFVAIAAMIAWSGWRIVDYVSTE 360

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T+ D+   +     T+ RVVVL+ +A+I+W+PVG+WIG RP ++ KIQP AQ LAAFPA
Sbjct: 361 LTFADLGQAVEYTLFTLIRVVVLLALATIVWVPVGVWIGLRPALADKIQPLAQFLAAFPA 420

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           NV FP+ V  +  + LNP++WLS L++FGTQWYILFNVIAGA+AFPND KE  + F I G
Sbjct: 421 NVIFPIAVVLILRFSLNPDIWLSPLIVFGTQWYILFNVIAGAAAFPNDLKEAVAGFRIHG 480

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             WW+ +++P IFP+YVTGA+TA GG+WNA+IV+E   WG   +   G+GAYIAE+TEKG
Sbjct: 481 LDWWKSVMIPAIFPFYVTGALTASGGSWNAAIVAEYVRWGDTVVAAHGIGAYIAEATEKG 540

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +P++VLGV +M   V+  NR  W PL+    R LRL
Sbjct: 541 DYPKIVLGVAVMAAVVILFNRLFWRPLFGLAERRLRL 577


>gi|271499902|ref|YP_003332927.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270343457|gb|ACZ76222.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 584

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 298/569 (52%), Positives = 394/569 (69%), Gaps = 15/569 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+L F L+  ++ ++++G+++ ++P  I+D  P+ LD+  LP+YA RTTLRM  A+ +SL
Sbjct: 28  DILFFTLLALVVALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALAVSL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           LFT V ATLAAKSR+  MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  LFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WNM FS +QSL  +P DL EVS+ F  S W++F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFAIPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M  VI LYDQLLF
Sbjct: 208 SGGWFFVVASEAITVGNTTVSLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF-LRFIGYSSWNFFSPLSNNVKKLCRT 319
           RP++ W++KFR E+T       SWV  L R+T+     I   SW F+            T
Sbjct: 268 RPVVAWADKFRFEQTASQKRPRSWVYDLVRRTHISTAIINVLSWPFY------------T 315

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           L  +R+     FL+   + R + + D  W   V+ GV  G+  Q + YI       DV+ 
Sbjct: 316 LAALRWPSVPRFLRHTPSPRYNKITDRLWLALVIIGVLAGVV-QLVQYIGASLGMADVIA 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V  +G  T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP  V
Sbjct: 375 VFGMGLATLARVVVLIALASVIWVPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             ++ ++LNP++WLS LM+ GTQWYILFNVIAG +A P D  E A  + I  W+WWR + 
Sbjct: 435 ILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGTAALPTDLLEAARIYGIRRWQWWRQVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPGIFPYYVTGA+TA GG+WNASIVSE  SWG  HL  TGLGAYIA +T    F +V LG
Sbjct: 495 LPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFHQVALG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + +M  FV+A NR LW PLY +  R LRL
Sbjct: 555 IAVMSVFVIAFNRLLWRPLYQFAERRLRL 583


>gi|307130273|ref|YP_003882289.1| ABC transporter nitrate permease [Dickeya dadantii 3937]
 gi|306527802|gb|ADM97732.1| ABC transporter nitrate permease [Dickeya dadantii 3937]
          Length = 593

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/568 (52%), Positives = 392/568 (69%), Gaps = 13/568 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+L F L+  +  ++++G+++ ++P  I+D  P+ LD+  LP+YA RTTLRM  A+ +SL
Sbjct: 37  DMLFFTLLALLAALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALGVSL 96

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           LFT V ATLAAKSR+  MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 97  LFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIF 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WNM FS +QSL  +P DL EVS+ F  S W++F  L +PF+ PGLVWNMMMSM
Sbjct: 157 AIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFATPGLVWNMMMSM 216

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M  VI LYDQLLF
Sbjct: 217 SGGWFFVVASEAITVGNTTVNLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQLLF 276

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SWV  L R+T           +  + ++N +      L
Sbjct: 277 RPVVAWADKFRFEQTASQKRPRSWVYDLIRRT-----------HISTAIANVLGWPLHAL 325

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
             +R+    +FL+     R S + D  W   V+ GV  G+  Q + YI       DV+ V
Sbjct: 326 AALRWPRLPSFLRHTPGPRYSKVTDRLWLALVIIGVLAGVV-QLVQYIGASLGMADVIAV 384

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
             +G  T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP  V 
Sbjct: 385 FSMGLATLARVVVLIALASVIWLPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAVI 444

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++ ++LNP++WLS LM+ GTQWYILFNVIAGA+A P D  E A  + I  W+WWR + L
Sbjct: 445 LIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGAAALPTDLLEAARIYGIRRWQWWRQVAL 504

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PGIFPYYVTGA+TA GG+WNASIVSE  SWG  HL  TGLGAYIA +T    FP V LG+
Sbjct: 505 PGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFPRVALGI 564

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +M  FV+A NR LW PLY +  R LRL
Sbjct: 565 AVMSVFVIAFNRLLWRPLYQFAERRLRL 592


>gi|294637815|ref|ZP_06716088.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685]
 gi|291089055|gb|EFE21616.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685]
          Length = 578

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 292/572 (51%), Positives = 398/572 (69%), Gaps = 9/572 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN +D++AF L+I +I ++  G  +T  P   ++   I+L   +LP+YA RTTLRML 
Sbjct: 14  LHPNRWDVVAFPLIISLIAMMAIGFHQTLQPLASLEKQSISLAPAALPEYALRTTLRMLV 73

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM+ SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G 
Sbjct: 74  AMLASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFVALFPGRVLGV 133

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ELAAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    +GWQ+FW L  PF+MPGL+W
Sbjct: 134 ELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLDEVARGLHFTGWQRFWKLDAPFAMPGLIW 193

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFF+VASE I VG T   LPGIG+Y+A AI ++DL AI + +LTM+ VI  
Sbjct: 194 NMMMSMSGGWFFIVASEAITVGHTHFVLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILA 253

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQLLFRP++ W++KFR+E T    P  SW+  L R+T+            F+PL   + 
Sbjct: 254 YDQLLFRPLVAWADKFRMETTRSATPPTSWLFNLLRRTHLFH-------RLFAPLGQLLG 306

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L R         P   L++ +  R+   +D  W   +  + + ++ +   Y+ +  +  
Sbjct: 307 WLARLPLRCPRRRPT--LKVATPSRIGPTIDRLWGGAILLLTLYLSVRVGAYVQSGVSLH 364

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +V +V  LG IT+ RV +LI+I+S+IW+P+G+ IG RP +++KIQP AQ LAAFPAN+ F
Sbjct: 365 EVGHVFLLGLITLLRVSLLILISSLIWVPLGVLIGLRPALAAKIQPLAQFLAAFPANLLF 424

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ V  + ++ L+P++WLS L++ GTQWYILFNV+AG  +FPND++E A++FHI GW+WW
Sbjct: 425 PVFVIVIVHFRLDPDIWLSPLIVLGTQWYILFNVVAGTMSFPNDYREAAANFHIHGWQWW 484

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R I+LP +FPYYVTGAITA GGAWNASIV+E   WG   L   GLGAYIAE+T  G+FP 
Sbjct: 485 RQIMLPAVFPYYVTGAITAAGGAWNASIVAEYVQWGDTRLIAHGLGAYIAENTASGNFPH 544

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           ++LG+ +M  FV   NR LW PLY Y     R
Sbjct: 545 IILGIAMMALFVTLFNRLLWRPLYAYAETRFR 576


>gi|330810315|ref|YP_004354777.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378423|gb|AEA69773.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 546

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 293/551 (53%), Positives = 377/551 (68%), Gaps = 12/551 (2%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
           HG+ +   P  ++D  P++LD+  LP+Y  RTTLRM  A+  S +F+ V ATLAAKSR+ 
Sbjct: 7   HGLDQMNQPLGVLDSSPLSLDLVHLPEYTLRTTLRMFIALFASFVFSLVVATLAAKSRKA 66

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
            +V++P LDI+QS+P+LGFLTFTVV+FM L+PGK  G E AAIFAIFTSQVWNMTFS YQ
Sbjct: 67  AIVILPALDILQSVPVLGFLTFTVVFFMGLFPGKETGVECAAIFAIFTSQVWNMTFSFYQ 126

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +P DL EVSR F  S WQ+F  L +PF+ PGLVWNMMMSMSGGWFFVVASE I VG
Sbjct: 127 SLRTVPNDLYEVSRQFAFSPWQRFIRLELPFATPGLVWNMMMSMSGGWFFVVASEAITVG 186

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           DT + LPGIGS++ALAI++Q++ AI +A+L M+ VI  YD L FRP++ W++KFR E+T 
Sbjct: 187 DTTVSLPGIGSWLALAIEQQNIAAIAWAVLAMVAVIIAYDLLFFRPIVAWADKFRFEQTA 246

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 S V  L R T  +  +  +  +  + L   ++KL R L  IRF          +
Sbjct: 247 SQKRPRSRVYDLLRSTRLVPLVLLALGSIKASL--FLEKLPR-LPSIRFK---------T 294

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           + RVS   D  W  +V    I    Q   +I +   ++DV     LG IT+ RV VLI++
Sbjct: 295 SARVSRTADRVWLALVAAACIAGILQLSRFIGSTLGWEDVASTFGLGLITLVRVSVLIVL 354

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           AS++W+P+G+WIG  P  + ++QP AQLLAAFPANV FP  V  +    LNP++WLS LM
Sbjct: 355 ASVVWVPIGVWIGLNPRWAERLQPIAQLLAAFPANVLFPFAVIAIVALKLNPDVWLSPLM 414

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I GTQWYILFNVIAGASA P D +E A SFHI GW+WWR + LPG+FPYYVTGA+TA GG
Sbjct: 415 ILGTQWYILFNVIAGASALPTDLREAARSFHIHGWQWWRQVALPGVFPYYVTGALTAAGG 474

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           +WNASIV+E  SWG  HL  +GLG++IA++T  G    V LGV++M  FV+  NR LW P
Sbjct: 475 SWNASIVAEAVSWGDHHLYASGLGSFIAQATTAGDLQRVALGVVVMSIFVVGFNRLLWRP 534

Query: 577 LYLYGTRCLRL 587
           LY +  R LR+
Sbjct: 535 LYGFAERRLRI 545


>gi|285018221|ref|YP_003375932.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283473439|emb|CBA15944.1| putative abc transporter transmembrane permease protein
           [Xanthomonas albilineans]
          Length = 584

 Score =  578 bits (1490), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/580 (50%), Positives = 384/580 (66%), Gaps = 25/580 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN+ DL  F L++G+  +LLHG  +   P        ++LD+  LP+Y  RTTLRM +
Sbjct: 20  VLPNLHDLTVFALLLGLGVLLLHGAADMRAPLPPPGTTSVSLDLWQLPEYGLRTTLRMFA 79

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM  SLLFTFV ATLAAKSRR   V+VP LDI+QS+P+LGFLTFTV +F+ L+PG+ IGA
Sbjct: 80  AMAASLLFTFVVATLAAKSRRAERVIVPALDILQSVPVLGFLTFTVTFFLGLFPGRQIGA 139

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ELA+IFAIFTSQ WNM FS YQSL N+PRDL+EV+R F +S WQ+FW L  P++ P L+W
Sbjct: 140 ELASIFAIFTSQAWNMAFSFYQSLRNVPRDLDEVARGFGMSAWQRFWRLEAPYATPSLIW 199

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFFVVASE I VGD  + LPGIG+Y+ALAI +++  A+ +A+L M  +I L
Sbjct: 200 NMMMSMSGGWFFVVASEAITVGDHTLELPGIGAYLALAIGQRNFGAVAWAVLAMAVLIAL 259

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS-SWNF-------F 306
           YDQLLFRP++ WS+KFR E T       SW+  L R+T  ++ +    SW +       +
Sbjct: 260 YDQLLFRPIVAWSDKFRAELTASQNKPQSWLYDLLRRTRLVKRLAAPLSWAWQRTLLLRW 319

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P   +V     +LG                 R +   D FW   +    +  AW +  Y
Sbjct: 320 APRRASVSTAEASLG-----------------RGAVWGDRFWSVSLAAAGLTAAWFAFDY 362

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
              H +  D+      G  T+ RVVVLI +AS++W+P+G+WIG RP ++ ++QP AQ LA
Sbjct: 363 GRRHLSLHDLGDAFCGGLATLLRVVVLIALASLVWVPIGVWIGLRPKVAQRVQPLAQFLA 422

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPANV FP  V  +     NPN+WLS LMI GTQWYILFNVIAGASAFP D +E A+ +
Sbjct: 423 AFPANVLFPFAVLAIVATGANPNIWLSPLMILGTQWYILFNVIAGASAFPTDLREAATIY 482

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +  W WWR +ILPGIFPYYVTGA+TA GG+WNASIV+E+ASWG  H++  GLG+YIA +
Sbjct: 483 RLRSWTWWRRVILPGIFPYYVTGALTASGGSWNASIVAELASWGDRHVQAYGLGSYIARA 542

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T  G    V+LGV +M  FV   NR +W  LY++  R LR
Sbjct: 543 TAAGDGARVLLGVAVMSLFVSIFNRAVWRRLYVFAERRLR 582


>gi|237801737|ref|ZP_04590198.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024596|gb|EGI04652.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 584

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 291/567 (51%), Positives = 383/567 (67%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  VL+   + +LL+G  +   P D++   P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGVCLVLLAVFVGLLLYGAGQMLQPIDVLTSSPVSLDPARLPEYAWRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNIAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L+AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLMAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L R++     +G       + L+   K L    
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLRRSRLAPMLG-------ALLAAPWKGLM--- 317

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +    N  ++     VS ++D  W  +V    +        +I       D+    
Sbjct: 318 -LIDWRVLSNVWKVRPTPAVSRLIDYLWLGLVMAGCLAGGTYLFRFIEASLGLSDMATAF 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLIIIAS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMLRVIVLIIIASLIWVPIGVWIGLRPVWAERLQPVAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++  HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LP
Sbjct: 437 IAGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|328543644|ref|YP_004303753.1| nitrate transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326413389|gb|ADZ70452.1| Putative nitrate transport system permease protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 577

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/570 (51%), Positives = 386/570 (67%), Gaps = 11/570 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +++DL+A +LV+G +  L    +    P    D   I LD  +LP YA+ TTLRML+AMV
Sbjct: 18  SLWDLIAILLVLGALVFLAEASRGLMQPLPAADENVIVLDPAALPGYAAHTTLRMLAAMV 77

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +SL+FTF YAT AAKS R   VL+P+LDI+QS+PILGF++ TVV+F++L PG ++GAELA
Sbjct: 78  LSLVFTFTYATWAAKSHRAERVLIPLLDILQSVPILGFISVTVVFFLSLAPGMMLGAELA 137

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+FAIFTSQ WNM FS YQSL  +P +L E +RSFRLS W +FW L VPF+MP LVWNMM
Sbjct: 138 AVFAIFTSQAWNMAFSFYQSLRTVPAELAEAARSFRLSPWMRFWRLEVPFAMPALVWNMM 197

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFFVVA+E I VG T + LPGIGSYIALAI E+DL AI +A+ TML VI +YDQ
Sbjct: 198 MSMSGGWFFVVAAEAISVGGTTVTLPGIGSYIALAIAERDLGAIGWAIGTMLLVILIYDQ 257

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRP++ W+++FR E+ TG+ P  SWVL   R++   R +  ++ +  +    + + L 
Sbjct: 258 LLFRPLVAWADRFRFEQETGVAPPRSWVLMTLRRS---RLVARATASLGAAWRWSYRALP 314

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           +                    R +  LD      V  VA+    ++  ++       DV 
Sbjct: 315 KP--------GAGSASAAHPGRGARWLDRLLLGSVAVVALLGVVKAAQFLTAGVGLADVA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             + LG  TM RV VLI IASIIW+PVG+WIG RP  +   QP AQ +AAFPAN+ FPL 
Sbjct: 367 TAVLLGFATMIRVFVLIAIASIIWVPVGVWIGLRPGAARIAQPVAQFMAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           VS +  + L+P++WLS LMI GTQWYILFNV+AGAS  P++ +++ +S  + GW WW+ I
Sbjct: 427 VSVIVGFRLDPDIWLSPLMILGTQWYILFNVVAGASTIPSELRDIGASLRVRGWLWWQRI 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP +FP+YVTGAITA GG+WNASIV+EVASWG   L+  GLGA+IA++TE G F  +VL
Sbjct: 487 ALPAVFPFYVTGAITASGGSWNASIVAEVASWGQDRLQAHGLGAFIADATEAGDFHRIVL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G+ +M  FV+ +NR  W PLY +  R  RL
Sbjct: 547 GIAVMSAFVVVINRIFWRPLYAFAERKYRL 576


>gi|269140443|ref|YP_003297144.1| binding-protein-dependent transport system inner membrane component
           [Edwardsiella tarda EIB202]
 gi|267986104|gb|ACY85933.1| binding-protein-dependent transport system inner membrane component
           [Edwardsiella tarda EIB202]
 gi|304560235|gb|ADM42899.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Edwardsiella tarda FL6-60]
          Length = 579

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/571 (51%), Positives = 397/571 (69%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++AF L+I +I ++  G  +   P   ++   I+L   +LP YA RTTLRML AM
Sbjct: 16  PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLEKQTISLAPSALPDYALRTTLRMLVAM 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL
Sbjct: 76  LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    + WQ+FW L VPF+MPGL+WNM
Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTSWQRFWKLDVPFAMPGLIWNM 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE I VG+T   LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD
Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR+E T    P  SW+L L R+T              +PL + +  L
Sbjct: 256 QLLFRPLVAWADKFRMENTRTANPPTSWLLNLLRRTRLFH-------RLLAPLGHLLGWL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            R    +R+  P  +    +   R S  LD+ W   V  + + +  + + Y+ +  +  +
Sbjct: 309 ARL--PLRWPGPARYRPAPTTPGRSSRYLDLLWGAAVLVLTLYLCTRVVLYVRSGVSLHE 366

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP
Sbjct: 367 VGYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFP 426

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             V  + ++ LNP++WLS L++ GTQWYILFNV+AG   FPND++EV ++ HI GW+WWR
Sbjct: 427 AFVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWR 486

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I+LP IFPYYVTGA+TA GGAWNASIV+E   WG   +   GLGAYIAE+T  G+FP++
Sbjct: 487 QIMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVAAHGLGAYIAENTASGNFPKI 546

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           +LG+ IM  FV   NR LW PLY Y     R
Sbjct: 547 ILGIAIMSLFVTLFNRLLWRPLYAYAESRFR 577


>gi|30248980|ref|NP_841050.1| putative nitrate transport system permease protein [Nitrosomonas
           europaea ATCC 19718]
 gi|30138597|emb|CAD84888.1| putative nitrate transport system permease protein [Nitrosomonas
           europaea ATCC 19718]
          Length = 580

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 291/585 (49%), Positives = 389/585 (66%), Gaps = 23/585 (3%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +S R     +DL+A +LV+G++  L    ++   P        I+L+   LP+Y  RT+L
Sbjct: 10  LSHRFSAIFWDLVAVLLVLGMVVFLAQTSRDLMQPLAGPGETVISLEPSGLPEYVLRTSL 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RML+AMV+SL+FTF YAT AAKSRR G VL+P+LDI+QS+PILGF++ TVV+FM+  PG+
Sbjct: 70  RMLAAMVLSLIFTFTYATWAAKSRRAGQVLIPLLDILQSVPILGFISVTVVFFMSFAPGR 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++GAEL AIFAIFTSQ WNM FS YQSL  +P +L E SRSFRLS W +FW L VPF+MP
Sbjct: 130 MLGAELVAIFAIFTSQAWNMAFSFYQSLRTVPTELVEASRSFRLSPWMRFWKLEVPFAMP 189

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            LVWNMMMSMS GWFFVVASE I VG+TV+ LPGIGSYIALAI ++DL A+  A+  ML 
Sbjct: 190 ALVWNMMMSMSAGWFFVVASEAISVGNTVVTLPGIGSYIALAIDQRDLGAVGRAIAVMLI 249

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-----FIGYSSWNF 305
           VI +YDQLLFRP++ W ++FR E+     P  SWVL   R++ ++       +    W +
Sbjct: 250 VILIYDQLLFRPLVAWVDRFRFEQEADRNPPRSWVLMALRRSRWVAMAVVPLVRMWRWTY 309

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF---CVVCGVAIGIAWQ 362
            +      ++L RT             +      V   LD  W+    V+C V++   W+
Sbjct: 310 RAGNDGASRELART------------ARNTMGSGVISWLDWLWYGAIAVICAVSM---WK 354

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
              +++   T  +V   ++LGC+TM RV VLI +AS+IW+PVG+WIG  P  +  IQP  
Sbjct: 355 ITVFVLQGVTPDEVGTTVFLGCVTMVRVFVLIAVASVIWVPVGVWIGLHPAAARIIQPVT 414

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q +AAFPAN+ FPL VS +    L+P++WLS LMI GTQWYILFNVIAGAS  P + +++
Sbjct: 415 QFMAAFPANLLFPLAVSGIVVLRLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELRDI 474

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +  + GW WWR I LP +FP+Y+TGA+TA GG+WNASIV+E+A+WG   L+  GLGAY
Sbjct: 475 GINLGVRGWLWWRRIALPAVFPFYMTGAVTASGGSWNASIVAELANWGDTTLKANGLGAY 534

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           IAE+T  G F  +VLG+ +M  FV+ +NR  W PLY+   R  RL
Sbjct: 535 IAEATAAGDFHRIVLGIAVMSAFVVLINRLFWRPLYILAERKFRL 579


>gi|187926710|ref|YP_001893055.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241665042|ref|YP_002983401.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187728464|gb|ACD29628.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240867069|gb|ACS64729.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 577

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 292/571 (51%), Positives = 383/571 (67%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DLLA +LV+G++ +L  G ++   P        I+L   +LP Y  RT  RM +A+
Sbjct: 18  PRWRDLLAMLLVLGMVLLLGSGARQMVGPLVAASQPEISLSPLALPAYVLRTVTRMFAAL 77

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            +SLLFTF YATLAAKSRR  MVL+P+LD++QS+PILG+L+FTVV+FM L+PG V+GAEL
Sbjct: 78  ALSLLFTFTYATLAAKSRRAEMVLIPLLDVLQSVPILGYLSFTVVFFMALFPGNVLGAEL 137

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AA+FAIFTSQ WNM FS YQ+L  IP DL+E SR FR S WQ+FW L VPF+MPGLVWNM
Sbjct: 138 AAVFAIFTSQAWNMAFSFYQALRTIPADLDEASRGFRASSWQRFWRLEVPFAMPGLVWNM 197

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VGD  + LPG+G+Y+A AI ++DL A+ +A+L M   I LYD
Sbjct: 198 MMSMSGGWFFVVASEAISVGDVRVALPGVGAYVARAIAQRDLGAVGWAILAMAVAIVLYD 257

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRPM+ W++KFR E+T    P  SW+L LF ++ +++          +P+   + + 
Sbjct: 258 QLLFRPMVAWADKFRFEQTASQMPPRSWLLDLFHRSAWVQ-------RMMAPVGIALHQA 310

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R    +R+  P    +    +R+    D  W  +    A                + DV
Sbjct: 311 ARAQ--LRWPLPAMRWKGAMPRRLG---DALWLGLCAAGAAYAMLALYRLAGRTLAWTDV 365

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V   G  T+ RV+VLI +ASI+W+PVG+ +G  P  ++++QP AQ LAAFPAN+ FP+
Sbjct: 366 ATVARSGAFTLLRVMVLIALASIVWVPVGVAVGLSPRWTARVQPLAQFLAAFPANLLFPV 425

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  +  +H + ++WLSLLMI GTQWYILFNVIAGA+AFP+D +E A+SF I    WWR 
Sbjct: 426 VVFLIVRFHGSVDVWLSLLMILGTQWYILFNVIAGAAAFPSDLRETATSFRIRAPNWWRK 485

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPGI PYYVTG ITA GGAWNASIV+E  SWG +HL+  GLGAY+A+ T  G +P + 
Sbjct: 486 VMLPGILPYYVTGVITASGGAWNASIVAEAVSWGAVHLQAQGLGAYVAQQTAAGDYPRIA 545

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+  M   V+A NR LW PLY Y  R +RL
Sbjct: 546 LGIAAMSLMVIATNRLLWRPLYAYAERRMRL 576


>gi|226939379|ref|YP_002794452.1| ABC transporter nitrate permease [Laribacter hongkongensis HLHK9]
 gi|226714305|gb|ACO73443.1| probable ABC transporter nitrate permease [Laribacter hongkongensis
           HLHK9]
          Length = 576

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 292/586 (49%), Positives = 391/586 (66%), Gaps = 27/586 (4%)

Query: 12  SRRIF----PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           SRR      P  +D LAF L+ G++ +  HG++E   P  I+   P++LD  +LP YA  
Sbjct: 7   SRRFLAGFRPTPWDGLAFALIFGLLLLFGHGVREAWQPLAILQAEPVSLDPANLPAYALY 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRML+A+ +S LFT  YATLAA+S R G +++P LDI+QSIP+LG+L+FTV +F+ L+
Sbjct: 67  TTLRMLAALAVSFLFTLGYATLAARSARAGKLMIPALDILQSIPVLGYLSFTVTFFLALF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+++GAE AAIFAIFTSQ WNM FS+YQSL  +PRDL EV+ S RL+ WQ+FW L +P+
Sbjct: 127 PGRMMGAECAAIFAIFTSQAWNMAFSLYQSLTTLPRDLVEVAASLRLTAWQRFWKLDLPY 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MPGLVWNMMMSMSG WFFVVASE +VVG   + LPGIGSY+A+AI  +DL A+ + +LT
Sbjct: 187 AMPGLVWNMMMSMSGSWFFVVASEALVVGQQQVMLPGIGSYLAVAIDVRDLGAVGWVVLT 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI LYDQ+LFRP++ WS KF L+ T G+  + SW+L L  +   ++ +         
Sbjct: 247 MLVVIILYDQVLFRPLVAWSEKFNLQVTAGVAGSGSWLLTLGERARLIQTL--------- 297

Query: 308 PLSNNVKKLCRTLGVIRFHF------PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
                   L R  G +  H       P    Q  +        D  W   +  +A+   W
Sbjct: 298 --------LVRPAGRLLSHVAQLPLGPRLRWQAEAPASTPGWPDRLWLAGLTALALWALW 349

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
               Y+     + DVL V  LG +T+ RV VLI++AS++W+PVG+WIG RP ++ ++Q  
Sbjct: 350 SVWHYLAQAVDFHDVLAVFGLGALTLLRVAVLIVLASLVWVPVGVWIGLRPQLAGRVQAM 409

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ LAAFPAN+ FP  V  + ++ L+PN+WLS L+IFGTQWYILFNV+AGA AFP +++E
Sbjct: 410 AQFLAAFPANLLFPACVVLIIHFRLDPNVWLSPLLIFGTQWYILFNVVAGAQAFPAEYRE 469

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VAS+  I G  WWR ++LPGIFPY++TGA+TA GGAWNASIV E  SWG+  L   GLG+
Sbjct: 470 VASNLQIRGGLWWRKVMLPGIFPYFLTGALTASGGAWNASIVGEYVSWGNDVLVAKGLGS 529

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           YIAE T  G  P+V+LG+L+M  +V+  NR LW PL     R L L
Sbjct: 530 YIAEHTASGQHPQVLLGILVMAVYVVLFNRLLWRPLQELAERRLSL 575


>gi|148553197|ref|YP_001260779.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
 gi|148498387|gb|ABQ66641.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
          Length = 582

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/571 (49%), Positives = 372/571 (65%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN  D++A +L+ G+  +++ G +    P   +   P+TLD  +LP YA RTTLRM +A+
Sbjct: 23  PNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNLPGYALRTTLRMFAAL 82

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL FT    TLAA+SRR   ++VP LDI+QS+PILGFLTFTV +FM L+PG+ +G EL
Sbjct: 83  FASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVTFFMGLFPGRQLGVEL 142

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+IFAIFTSQ WNM FS YQSL ++P DLEEVSR F LS  ++F  L +PF+ P LVWN 
Sbjct: 143 ASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFLRLELPFATPALVWNA 202

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI   D   + +A+  M  VI LYD
Sbjct: 203 MMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGVAWAVGAMAVVILLYD 262

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QL+FRP++ W+++FR E+        SW   LFR+T  L  +              + + 
Sbjct: 263 QLVFRPVVAWADRFRFEQVASTERPRSWAYELFRRTRLLPLLLM--------PLAGLGRA 314

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              L  +R   P       +  R   + D  W   +    +  AW  IGY+     + + 
Sbjct: 315 LLMLDPVRAPRPAG----RAEARRGVIGDRVWTAAIAIAVLFAAWTIIGYVGRTLDWAEA 370

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V  L C+TM RV+ LI +AS+IW+PVG+WIG RP  + ++QP AQ LAAFPANV FP 
Sbjct: 371 AAVFGLACLTMLRVLALIAVASLIWVPVGVWIGLRPQWAERLQPVAQFLAAFPANVLFPF 430

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +  + L+P++WLS LM+ GTQWYILFNVIAGASA P D +E A  F + GW+WWR 
Sbjct: 431 AVIAIVRWKLDPDIWLSPLMVMGTQWYILFNVIAGASAIPTDLREAAGMFGVRGWQWWRQ 490

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPGIFPYYVTGA+TA GG+WNASIV+E  SWG  HL  +GLGA+IA++T  G +P V 
Sbjct: 491 VALPGIFPYYVTGALTASGGSWNASIVAEAVSWGDDHLHASGLGAFIADATAIGDYPRVA 550

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+A NR LW PLY +  R LRL
Sbjct: 551 LGIAMMSLFVIAFNRLLWRPLYSFAERRLRL 581


>gi|148258639|ref|YP_001243224.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410812|gb|ABQ39318.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 585

 Score =  572 bits (1473), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 284/552 (51%), Positives = 372/552 (67%), Gaps = 17/552 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+ +   P   ++  P+ L +  LP+YA  +TLRM  A+  SL+FT   ATLAAKSR+  
Sbjct: 46  GVGQMRQPLTALNAAPVDLQLLHLPEYALLSTLRMFGALAASLIFTLTVATLAAKSRKAE 105

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           +++VP LDI+QS+P+LGFLTFTV++FMNL+PG+ +G E AAIFAIFTSQ WNM FS YQS
Sbjct: 106 LIIVPALDILQSVPVLGFLTFTVMFFMNLFPGRQLGVECAAIFAIFTSQAWNMAFSFYQS 165

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P+DL+EVSR F  S W++F  L +PF+MPGLVWN MMSMSGGWFFVVASE I VG+
Sbjct: 166 LRTVPKDLDEVSRQFGFSSWRRFVRLELPFAMPGLVWNAMMSMSGGWFFVVASEAIAVGN 225

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T I LPGIGS++ALAI+ +D  A+ +A+  M  VI LYDQL+FRP++ W++KFR E+T  
Sbjct: 226 TTIALPGIGSWLALAIERKDFGAVAWAVFAMAVVIVLYDQLIFRPIVAWADKFRFEQTAS 285

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC---RTLGVIRFHFPENFLQL 334
                SWV  L R+T  L  I              ++ L    R L  + +  P     L
Sbjct: 286 RERPRSWVYDLARRTRLLPSI--------------IELLLVAGRALSALSWSAPPRRQTL 331

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
             N+ +  + D  W   +  V  G +   + +I    T  D++ ++ LG  T+ RV VLI
Sbjct: 332 HPNKHIIRVPDGLWIGFIAVVCFGASLWLLRFISTSLTAADIISIVGLGFATLVRVAVLI 391

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            IASIIW+P+G+WIG RP  S ++QP AQ LAAFPANV FP  V  +    L+PN+WLS 
Sbjct: 392 AIASIIWVPIGVWIGLRPTWSERLQPVAQFLAAFPANVLFPFAVVIIIGLRLDPNIWLSP 451

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           LMI GTQWYILFNVIAGASA PND +E A +F++ G +WWR + LPGIFPY+VTGA+TA 
Sbjct: 452 LMILGTQWYILFNVIAGASALPNDLREAARTFNMRGLQWWRQVALPGIFPYFVTGALTAS 511

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           GG+WNASIV+E  SWG   L+ TGLG++IA++T  G  P V +G+++M  FV+ LNR LW
Sbjct: 512 GGSWNASIVAESVSWGDKRLQATGLGSFIADATAAGDLPRVAVGIVVMSAFVVTLNRTLW 571

Query: 575 HPLYLYGTRCLR 586
            PLY Y  R LR
Sbjct: 572 RPLYRYAERRLR 583


>gi|170742462|ref|YP_001771117.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196736|gb|ACA18683.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 602

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/583 (50%), Positives = 388/583 (66%), Gaps = 16/583 (2%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN +D+ AF++VIG +   LHG+ E   P   +D  P+ LD   LP YA RTTLR+ +
Sbjct: 25  LIPNGYDVAAFLVVIGGLIATLHGVHEMRAPLAALDGEPVRLDPWLLPDYALRTTLRLFA 84

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM  SL+FT + A LAAKSR+  +V+VP LDI+QS+P+LGFL+FTV +F+ L+PG+ +GA
Sbjct: 85  AMAASLVFTVLVAPLAAKSRKAELVIVPALDILQSVPVLGFLSFTVAFFLGLFPGRQLGA 144

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFA+FT+Q WNM FS YQSL N+PRDL EV+R FRLS WQ+F  L  PF++PGLVW
Sbjct: 145 ECAAIFAVFTAQAWNMAFSFYQSLRNLPRDLTEVTRHFRLSPWQRFVRLEAPFAVPGLVW 204

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           N MMSMSG WFF+VASE I VGDT I LPGIG+++ALAI  +DL AI +A+  +  VI L
Sbjct: 205 NAMMSMSGSWFFIVASEAISVGDTRITLPGIGAWLALAIDRKDLAAIAWAVAAIAAVILL 264

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR----------FIGYSSWN 304
           YDQL+FRP++ W++KFR E+T       S+V  L R+T  LR           +  S   
Sbjct: 265 YDQLVFRPIVAWADKFRFEQTAAQARPRSFVYDLLRRTRALRGIAALVGAAAALLGSVIR 324

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P       L  T   +R   P     L +   ++ + D  W   V  +A    W + 
Sbjct: 325 AAAPFRRASSLLPATRK-LRLAKP-----LLAKPLLATLADRAWLVAVVALAASALWIAA 378

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++       D++  + LG +T+ RVVVLI +AS+IW+P+G+WIG RP ++   QP AQ 
Sbjct: 379 DFVRATLGLGDLVEAVALGALTLLRVVVLIAVASVIWVPIGVWIGLRPAVAEATQPLAQF 438

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP  V  +     +PN+WLS LM+ GTQ YILFNV+AGASAFP D +E A+
Sbjct: 439 LAAFPANILFPFAVVAIVATGADPNIWLSPLMVLGTQCYILFNVVAGASAFPTDLREAAT 498

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + +  W+WWR  ILPGIFPYYVTGA+TA GG+WNASIV+EVASWG   L+  GLGAYIA
Sbjct: 499 LYRMRSWQWWRDAILPGIFPYYVTGALTASGGSWNASIVAEVASWGDTKLKAAGLGAYIA 558

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++T+ G +P VVLGV +M  FV+  NR +W PLY YG R  RL
Sbjct: 559 QATDAGDYPRVVLGVAVMSLFVVVFNRLVWRPLYAYGERRFRL 601


>gi|71734937|ref|YP_277251.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555490|gb|AAZ34701.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 584

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 284/567 (50%), Positives = 380/567 (67%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V+ +LD  W  +V    +  +     +I       D++  +
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330961443|gb|EGH61703.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 584

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 285/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I D +  V++   I +L +G+ +   P  ++D  P+TLD   LP+YA RTTLRM  A+  
Sbjct: 26  IADGICVVILAVFIALLWYGVGQMLQPLAVLDSSPVTLDPARLPEYALRTTLRMFIALAA 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FTF+ ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 86  SLIFTFIVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMM
Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPNDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVA E I VGDT + LPGIGS++ALA+++++L AI +A+  M  VI  YDQL
Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAVEQKNLPAIGWAVGAMALVILAYDQL 265

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SWV  +  ++     +              +    +
Sbjct: 266 LFRPVVAWADKFRFEQTASSKRPRSWVYSVLGRSRLAPLL-----------GALLAAPWK 314

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L +I +     F ++    RV+ ++D  W  +V    +  +     +I       D++ 
Sbjct: 315 GLMLIDWRVVSRFWKVKPTPRVARLIDYLWLGMVMAACLTASLYLFRFIEASLGLSDMIT 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              LG  TM RV+VLI++AS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V
Sbjct: 375 AFGLGLATMLRVIVLIMVASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + 
Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG
Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIASATQAGDFPRVTLG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + +M  FV+A NR LW PLY +  R L L
Sbjct: 555 IAVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|320321792|gb|EFW77890.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331540|gb|EFW87480.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 584

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/567 (49%), Positives = 379/567 (66%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +P ++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPLAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V+ +LD  W  +V    +  +     +I       D++  +
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|15837013|ref|NP_297701.1| ABC transporter nitrate permease [Xylella fastidiosa 9a5c]
 gi|9105249|gb|AAF83221.1|AE003892_6 ABC transporter nitrate permease [Xylella fastidiosa 9a5c]
          Length = 584

 Score =  568 bits (1464), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/576 (50%), Positives = 386/576 (67%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +    P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMAFLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+          +PL+  
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             +L + + ++R+        +  + R  S   D  W  V+  VA    +     +    
Sbjct: 310 --RLWQRVLLLRWTKRNRVTVVPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVTTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|289625535|ref|ZP_06458489.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649788|ref|ZP_06481131.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330870904|gb|EGH05613.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 584

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/567 (50%), Positives = 378/567 (66%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V  +LD  W  +V    +  +     +I       D++   
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAF 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMGRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|257485651|ref|ZP_05639692.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 584

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/567 (49%), Positives = 380/567 (67%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ+LF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQVLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  +  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V+ +LD  W  +V    +  +     +I       D++  +
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRCVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|331011939|gb|EGH91995.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 584

 Score =  565 bits (1456), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 281/567 (49%), Positives = 379/567 (66%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ+LF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQVLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  +  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V+ +LD  W  +V    +  +     +I       D++  +
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRCVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+ PYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVVPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|197116829|ref|YP_002137256.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197086189|gb|ACH37460.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 578

 Score =  565 bits (1456), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 285/574 (49%), Positives = 387/574 (67%), Gaps = 10/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  PN +DL AF++V+G++ +   G +E  +P    + +P++LD  +LP+YA RT LRM 
Sbjct: 14  RAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMA 73

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SLLFTF Y TLAAKSRR   +LVP+L+I+QS+PILGFL+ TV  F+ ++PGK++G
Sbjct: 74  AALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLG 133

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E AAIFAIFTSQ WNM FS YQSL  IP DL E S  F LS WQ+FW L  PF+MP L+
Sbjct: 134 VECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLI 193

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMS+SGGWFFVVASE I VG T + LPGIGSY+A AI  + L AI +A+LTML VI 
Sbjct: 194 WNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSAIGWALLTMLLVIL 253

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           +YDQLLFRPM+ W++KF+ E T     + SWVL LF++   LR  G    N +  L++ +
Sbjct: 254 VYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLL 313

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  +     R  F +      +   +    +I W  ++     G AW  + ++      
Sbjct: 314 PRRKQ-----RASFRD-----ATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDG 363

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++  V +LG +T+ RV VL+IIAS+IW+P+G++IG  P  ++++QP AQ LAAFPAN+F
Sbjct: 364 AEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPANLF 423

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + +YHL+P +W + LMI GTQWYILFNVI GASA P D +E A +F ++GW+ 
Sbjct: 424 FPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSGWKL 483

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W+ ++LPGIFP  VTG +TA GG WNASIV+E+ +WG+  L  TGLG+YIA  TEKG +P
Sbjct: 484 WKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYP 543

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + LG+ +M  +VL LNRF W  L+       RL
Sbjct: 544 RIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRL 577


>gi|330986971|gb|EGH85074.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 584

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/567 (49%), Positives = 377/567 (66%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLVVIAVFITLVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L  ++     +G           + +   C+ L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +        +     V  +LD  W  +V    +  +     +I       D++   
Sbjct: 317 MLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAF 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVG+WIG R   + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRLVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|182678590|ref|YP_001832736.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634473|gb|ACB95247.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 578

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/579 (50%), Positives = 395/579 (68%), Gaps = 12/579 (2%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F+ R+  PN +D  AF+L++     + +G    T+P    +   I+LD  +LP YA RTT
Sbjct: 10  FLDRKSLPNPYDFAAFILLLAAFVAVAYGSSGLTLPLSAPEATHISLDYGALPYYALRTT 69

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM +A+  SL+FTF YATLAAKS+R  +VL+P+LDI+QS+PILGFL+FTV +F++L+PG
Sbjct: 70  LRMFAAIAASLVFTFTYATLAAKSQRAALVLIPLLDILQSVPILGFLSFTVTFFLHLFPG 129

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +G E AA+FAIFTSQ WNM FS YQSL ++PRDL EV+  F LS WQKFW L  P++M
Sbjct: 130 STLGVECAAVFAIFTSQAWNMAFSFYQSLRSLPRDLVEVANGFHLSPWQKFWQLETPYAM 189

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L+WN MMSMSGGWFFVVASE I VGDT + LPGIGSY+A AI+ + + A++ A+  M 
Sbjct: 190 PALIWNTMMSMSGGWFFVVASEAISVGDTTVKLPGIGSYLAQAIEMRRIDAVIAAVAAMA 249

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            VI LYDQLLFRP++V++ KFR+E +       SWV  LF +T +LR +          +
Sbjct: 250 IVILLYDQLLFRPLVVFAGKFRVELSASQTKESSWVADLFNRTRWLRAL----------M 299

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           S  V+ L  ++ + R   P    Q    Q   S +LD+ W  ++  +++      I ++ 
Sbjct: 300 SMPVQTLS-SIALWRLELPFWRAQAIDKQAHSSRVLDLLWITLIAFLSLWALRFVIVFVG 358

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              T+ D+   + L   TM RVV+L+ +A+++W+P+G++IG RP ++ KIQP AQ LAAF
Sbjct: 359 QTLTFADIQESLILTFFTMLRVVLLMALATLVWVPIGVFIGLRPALAEKIQPLAQFLAAF 418

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PANV FP+VV  +  + LNP++WLS L+IFGTQWYILFNVIAG  AFPND KE ASSF I
Sbjct: 419 PANVVFPIVVVVIVRFGLNPDIWLSFLIIFGTQWYILFNVIAGTMAFPNDLKEAASSFGI 478

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            GW WW  +ILPGIFP+YVTGA+TA GG+WNA+IV+E   WG + +   G+GAYIA++T 
Sbjct: 479 KGWNWWTSVILPGIFPFYVTGALTASGGSWNAAIVAESVKWGDVSIEAHGIGAYIADATA 538

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           KG +P +VLGV +M   V+  NR +W PL+    R LRL
Sbjct: 539 KGDYPRIVLGVTVMSIVVILFNRLVWRPLFGLAERRLRL 577


>gi|289677501|ref|ZP_06498391.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330898685|gb|EGH30104.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 584

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/567 (49%), Positives = 377/567 (66%), Gaps = 11/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D +   L+   I + ++G  +   P  +++  P++LD   LP+YA RTTLRM  A+  SL
Sbjct: 28  DGICLALLTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASL 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF
Sbjct: 88  IFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSM
Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSM 207

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLF
Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KFR E+T       SW+  L  ++     +G           + +    + L
Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SVLAAPWKCL 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +I +       ++     V+ +LD  W  +V    +  +     +I       D++   
Sbjct: 317 MLIDWRVFSRLWKVKLTPGVARVLDYVWLGLVMAACLAGSVYLFRFIEASLGASDMVTAF 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330937353|gb|EGH41350.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 584

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/556 (50%), Positives = 374/556 (67%), Gaps = 11/556 (1%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            E+T       SW+  L  ++     +G           + +    + L +I +      
Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPWKCLMLIDWRVFSRL 327

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++     V+ +LD  W  +V    +  +     +I       D++    LG  TM RV+
Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++W
Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+
Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG+++M  FV+A NR
Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567

Query: 572 FLWHPLYLYGTRCLRL 587
            LW PLY +  R L L
Sbjct: 568 LLWRPLYGFAERRLSL 583


>gi|330878195|gb|EGH12344.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 584

 Score =  562 bits (1448), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/550 (50%), Positives = 368/550 (66%), Gaps = 11/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTF  ATLAAKSR+  
Sbjct: 45  GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKAE 104

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS
Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD
Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR E+T  
Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTAS 284

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+  L  ++                LS  +    + L +I         ++   
Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
             V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI+IA
Sbjct: 334 PGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVSAFGLGLATMLRVIVLIVIA 393

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM+
Sbjct: 394 SLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+
Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW PL
Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573

Query: 578 YLYGTRCLRL 587
           Y +  R L L
Sbjct: 574 YGFAERRLSL 583


>gi|167561672|ref|ZP_02354588.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
          Length = 577

 Score =  562 bits (1448), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 282/553 (50%), Positives = 365/553 (66%), Gaps = 18/553 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G ++  +P D+     I+L   +LP YA RT LRML+A+  S  FTF YATLAA+SR   
Sbjct: 39  GARQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFAFTFAYATLAARSRAAE 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTVV+F+++ P    GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVVFFLSITPSSTFGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           LC +PRDL+E SRS R +GWQ+FW L VPF+MPGL WN MMSMSGGWFFVVASE I VGD
Sbjct: 159 LCTVPRDLDEASRSLRQTGWQRFWRLEVPFAMPGLAWNAMMSMSGGWFFVVASEAISVGD 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPG+G+Y+A AI E+DL A+ YA+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LHIALPGVGAYVARAIAERDLAAVGYAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+L L  + +  + +G       +PL   + +  R    +    P +   L   
Sbjct: 279 GPAPRSWLLDLLHRASLPQRVG-------TPLGAMLHRAARARLSLGARLPAHERSLSRR 331

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIG---YIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
                   I WF  +C  A GI +  IG   +     T+ DV+ V   G +T+ RV+VLI
Sbjct: 332 -----FGRIVWFS-LC--AAGIVYAGIGLFRFAAPVLTWADVVDVARNGALTLARVLVLI 383

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +AS +W+P+G+ IG RP  ++ +QP AQ LAAFPAN+ FP  V  ++++ L P +WLS 
Sbjct: 384 GVASAVWVPIGVLIGLRPRATAFVQPIAQFLAAFPANLLFPPAVFAIAHFELTPAIWLSP 443

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           LMI GTQWYILFNVIAGA+ FP+D KE A+S  +    WW  ++LPGI PYYVTGAITA 
Sbjct: 444 LMILGTQWYILFNVIAGATVFPDDLKEAAASLRVRTPTWWTKVVLPGILPYYVTGAITAS 503

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           GGAWNASIVSE+  WGH  L  +GLGAY+A  T  G +P + LGV  M   V+A+NR +W
Sbjct: 504 GGAWNASIVSELVGWGHTTLDASGLGAYVARMTAAGDYPRIALGVAAMSLLVIAMNRLMW 563

Query: 575 HPLYLYGTRCLRL 587
            PLY +  R  RL
Sbjct: 564 RPLYAFAERRSRL 576


>gi|330952378|gb|EGH52638.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 584

 Score =  561 bits (1447), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 286/567 (50%), Positives = 374/567 (65%), Gaps = 33/567 (5%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIG-----------YSSWNFFSPLSNNVKKLCRTL 320
            E+T       SW+  +  ++     +G              W  FS L     K+  T 
Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLGSILAAPWKCLMLIDWRVFSRL----WKVKLTP 334

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           GV+R                  +LD  W  +V    +  +     +I       D++   
Sbjct: 335 GVVR------------------VLDYAWLGLVMAACLAGSVYLFRFIEASLGVSDMVTAF 376

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  
Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP
Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALP 496

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG++
Sbjct: 497 GVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+A NR LW PLY +  R L L
Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|238921314|ref|YP_002934829.1| nitrate/sulfonate/bicarbonate ABC transporter [Edwardsiella
           ictaluri 93-146]
 gi|238870883|gb|ACR70594.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Edwardsiella ictaluri 93-146]
          Length = 578

 Score =  561 bits (1447), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/570 (51%), Positives = 394/570 (69%), Gaps = 9/570 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++AF L+I +I ++  G  +   P   +    I+L   +LP YA RTTLRML AM
Sbjct: 16  PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLGKQSISLAPDALPDYALRTTLRMLLAM 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL
Sbjct: 76  LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    +GWQ+FW L VPF+MPGL+WNM
Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTGWQRFWKLDVPFAMPGLIWNM 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE I VG+T   LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD
Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+++FR+E T    P  SW+L L R+T             F+PL   +  L
Sbjct: 256 QLLFRPLVAWADRFRMENTRTANPPTSWLLNLLRRTRLFH-------RLFTPLGQLLGWL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R    +R+     +    +  R    LD+ W   +  + + +  + I Y+ +  +  +V
Sbjct: 309 ARL--PLRWPGQPRYRPAPAPGRSQRYLDLLWSAAILLLTLYLCTRVILYVHSGVSLHEV 366

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP 
Sbjct: 367 GYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFPA 426

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  + ++ LNP++WLS L++ GTQWYILFNV+AG   FPND++EV ++ HI GW+WWR 
Sbjct: 427 FVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWRQ 486

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP IFPYYVTGA+TA GGAWNASIV+E   WG   +   GLGAYIAE+T  G+FP ++
Sbjct: 487 IMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVVAHGLGAYIAENTASGNFPNII 546

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           LG+ IM  FV   NR LW PLY Y     R
Sbjct: 547 LGIAIMSLFVTLFNRLLWRPLYAYAESRFR 576


>gi|330970284|gb|EGH70350.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 584

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 278/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G+ +   P  +++  P++LD   LP+YA RTT+RM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIALAASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            E+T       SW+  +  ++     +G           + +    + L +I        
Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SVLAAPWKCLMLIDGRVISRL 327

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++     V+ +LD  W  +V    +  +     +I       D++    LG  TM RV+
Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI++AS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++W
Sbjct: 388 VLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+
Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG+++M  FV+A NR
Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567

Query: 572 FLWHPLYLYGTRCLRL 587
            LW PLY +  R L L
Sbjct: 568 LLWRPLYGFAERRLSL 583


>gi|302188283|ref|ZP_07264956.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 584

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G  +   P  +++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            E+T       SW+  L  ++                L++ +    + L +I +      
Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPM-----------LASVLAAPWKCLMLIDWRVFSRL 327

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++     ++ +LD  W  +V    +  +     +I       D++    LG  TM RV+
Sbjct: 328 WKVKLTPGIARVLDYVWLGLVMAACLAGSVYLFRFIEASLGTSDMVTAFGLGLATMVRVI 387

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++W
Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+
Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG+++M  FV+A NR
Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567

Query: 572 FLWHPLYLYGTRCLRL 587
            LW PLY +  R L L
Sbjct: 568 LLWRPLYGFAERRLSL 583


>gi|330976362|gb|EGH76419.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 584

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 281/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            E+T       SW+  L  ++     +G           + +    + L +I +      
Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SVLAAPWKCLMLIDWRVFSRL 327

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++     V+ +LD  W  +V    +  +     +I       D++    LG  TM RV+
Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++W
Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LM  GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+
Sbjct: 448 LSPLMGLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG+++M  FV+A NR
Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567

Query: 572 FLWHPLYLYGTRCLRL 587
            LW PLY +  R L L
Sbjct: 568 LLWRPLYGFAERRLSL 583


>gi|330964413|gb|EGH64673.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 584

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 279/550 (50%), Positives = 368/550 (66%), Gaps = 11/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTF  ATLAAKSR+  
Sbjct: 45  GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKAE 104

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS +QS
Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFFQS 164

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD
Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR E+T  
Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTAS 284

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+  L  ++                LS  +    + L +I         ++   
Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
             V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI+IA
Sbjct: 334 PGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVGAFGLGLATMLRVIVLIVIA 393

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM+
Sbjct: 394 SLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+
Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW PL
Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573

Query: 578 YLYGTRCLRL 587
           Y +  R L L
Sbjct: 574 YGFAERRLSL 583


>gi|167835552|ref|ZP_02462435.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 578

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/555 (51%), Positives = 372/555 (67%), Gaps = 21/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++ ++P DI     I+L   +LP Y  RT LRML+A+  S+ FTF YA LAAKSR   
Sbjct: 39  GVRQMSLPLDIARPEAISLSPLALPGYVLRTVLRMLAALGASIAFTFAYAPLAAKSRTAE 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTVV+F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  TVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGTTLGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPG+G+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LHIALPGVGAYVARAIAERDLAAVGWAIAAMTIAITLYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL   + +  R   +LG +R    E  L  
Sbjct: 279 GPAPRSWLLDLLHRASLPQRVG-------APLGATLHRAARARLSLGALRLSTRERAL-- 329

Query: 335 CSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
             ++R++    I W   C    V  G+A   I       ++ DV+ V   G +T+ RV+V
Sbjct: 330 --SRRIA---RIVWLSLCAALAVYAGVALLRIA--APALSWFDVVDVARNGALTLARVLV 382

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+PVG+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 383 LIGVATVVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 442

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGA+AFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 443 SPLMILGTQWYILFNVIAGATAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 502

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  +   GLGAYIA +T  G +P + LGV  M   V+A+NR 
Sbjct: 503 ASGGAWNASIVSELVVWGHTTIDAAGLGAYIARTTAAGDYPRIALGVAAMSLLVIAMNRL 562

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 563 IWRPLYAFAERRSRL 577


>gi|66048315|ref|YP_238156.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63259022|gb|AAY40118.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 584

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/556 (49%), Positives = 372/556 (66%), Gaps = 11/556 (1%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I + ++G+ +   P  +++  P++LD   LP+YA RTT+RM  A+  SL+FTFV ATLAA
Sbjct: 39  IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIALAASLIFTFVVATLAA 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           KSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ 
Sbjct: 99  KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E
Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            I VGDT + LPGIGS++AL I++++L AI +A+  M  VI  YDQLLFRP++ W++KFR
Sbjct: 219 AISVGDTTVNLPGIGSWLALTIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            E+T       SW+  +  ++     +G           + +    + L +I        
Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SVLAAPWKCLMLIDGRVISRL 327

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++     V+ +LD  W  +V    +  +     +I       D++    LG  TM RV+
Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI++AS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++W
Sbjct: 388 VLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+
Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V LG+++M  FV+A NR
Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567

Query: 572 FLWHPLYLYGTRCLRL 587
            LW PLY +  R L L
Sbjct: 568 LLWRPLYGFAERRLSL 583


>gi|326387996|ref|ZP_08209600.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207497|gb|EGD58310.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 581

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/571 (50%), Positives = 367/571 (64%), Gaps = 13/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P+  D +AFV++ G+  I     + T  P   + + P+TLD   LP YA RT LRM  A+
Sbjct: 23  PSREDAIAFVILGGLAAIFFRTAEATVAPLSTLQLEPLTLDPSYLPYYALRTVLRMFVAL 82

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             S +FT V ATLAA+SR LG ++VP LDI+QS+PILGFLTFTV +FM L+PG V+G E 
Sbjct: 83  FASTVFTLVVATLAARSRHLGQLIVPALDILQSVPILGFLTFTVTFFMGLFPGSVLGVEC 142

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+IFAI TSQ WNM FS YQSL  IP DLEE +  +RLS  ++F  L +PF+ P LVWN 
Sbjct: 143 ASIFAILTSQAWNMAFSFYQSLRAIPSDLEEATVIYRLSPIRRFLKLDLPFATPALVWNA 202

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG T + LPGIGS++ALAI  +D LA+  A+  M  VI  YD
Sbjct: 203 MMSMSGGWFFVVASEAITVGKTTVTLPGIGSWLALAIGRRDFLAVGEAVAAMALVIVAYD 262

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QL FRP++ W+++FR E T       SWV  L R+T  L  +        +PL   + +L
Sbjct: 263 QLFFRPIVAWADRFRFEMTASAERPRSWVFDLLRRTRLLPVV-------LAPL-GAIGRL 314

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
                ++ F       +     R   +L+  W  +V   A         YI+    + DV
Sbjct: 315 -----LLAFEPRVGRRKAIGPARSYPLLEKVWQALVIVAATAALVLLSRYIMRSLMWGDV 369

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  + L  +TM RV+VLI +AS++W+PVG+WIG RP  + ++QP AQ LAAFPANV FP 
Sbjct: 370 LTAVLLAGLTMIRVMVLIALASLVWVPVGVWIGLRPVWAERLQPLAQFLAAFPANVLFPF 429

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +  + L P++WLS LMI GTQWYILFNVIAGASA P D +E A  F + GW+WWR 
Sbjct: 430 AVMAIVRFDLAPDVWLSPLMILGTQWYILFNVIAGASAIPTDLREAAWMFRVRGWQWWRQ 489

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPGIFPYYVTGA+TA GG+WNASIV+E   WG+ HL   GLG++IAE+T  G +P V 
Sbjct: 490 VALPGIFPYYVTGALTASGGSWNASIVAEAVDWGNRHLVARGLGSFIAEATTAGDYPRVA 549

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FVL  NR LW PLY Y  R LRL
Sbjct: 550 LGIGVMSLFVLGFNRLLWRPLYAYADRRLRL 580


>gi|331017764|gb|EGH97820.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 584

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATL AKSR+  
Sbjct: 45  GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLGAKSRKAE 104

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS
Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD
Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ LFRP++ W++KFR E+T  
Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+  L   +                LS  +    + L +I         ++   
Sbjct: 285 SKRPRSWMYSLLGGSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
             V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI IA
Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFHFIEASLGFSDMVGAFGLGLATMLRVIVLIAIA 393

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNPN+WLS LM+
Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPNIWLSPLMV 453

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+
Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW PL
Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573

Query: 578 YLYGTRCLRL 587
           Y +  R L L
Sbjct: 574 YGFAERRLSL 583


>gi|114332379|ref|YP_748601.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
 gi|114309393|gb|ABI60636.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
          Length = 579

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 276/535 (51%), Positives = 368/535 (68%), Gaps = 10/535 (1%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+LD  +LP+YA RT+LRML AMV+SL+FTF YAT AAKS R   +L+P+LDI+QS+P+L
Sbjct: 53  ISLDPSALPEYALRTSLRMLLAMVLSLIFTFTYATWAAKSWRAEQILIPLLDILQSVPVL 112

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF++ TVV+F++  PGK++GAELA++FAIFTSQ WNM FS YQSL  +PR+L+EVSRSFR
Sbjct: 113 GFISITVVFFLSFAPGKMLGAELASVFAIFTSQAWNMAFSFYQSLHTVPRELDEVSRSFR 172

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           LS W +FW L VPF+MP L+WNMMMSMSG WFFVVASE I VGDT++ LPGIGSYIALAI
Sbjct: 173 LSPWMRFWKLEVPFAMPALIWNMMMSMSGSWFFVVASEAISVGDTIVTLPGIGSYIALAI 232

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-IYPADSWVLYLFRKT 292
            ++DL AI +A+  ML VI +YDQLLFRP++ W+++FR E+ TG + P  SWVL +  ++
Sbjct: 233 DQRDLGAIGWAIAVMLIVILIYDQLLFRPLVAWADRFRFEQETGGMPPPHSWVLTVLHRS 292

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            ++ F        +       ++  R          + F    +   +   +D  W+  +
Sbjct: 293 QWITFTTALFARIWRWTYRKSQQPARK---------KAFTWKGTGTNLKPWVDWLWYGTI 343

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             V   I+W+   +I+      +V   ++LG ITM RV VLI +AS+IW+PVG+W+G RP
Sbjct: 344 TVVCAIISWKITFFILQEVALAEVGTAMFLGFITMVRVFVLIAVASVIWVPVGVWLGLRP 403

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +   QP AQ +AAFPAN+ FP  V  +    L+P++WLS LMI GTQWYILFNVIAGA
Sbjct: 404 GAARIAQPIAQFMAAFPANLLFPPAVYGIVVLQLDPDIWLSPLMILGTQWYILFNVIAGA 463

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           S  P +  +++++  + GW WWR I LP +FP+YVTGAITA GG+WNASIV+E+ SWG  
Sbjct: 464 STIPGELHDISANLGVRGWLWWRRIALPAVFPFYVTGAITASGGSWNASIVAEIVSWGST 523

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            L+  GLGAYI E+T  G F  V LG+ +M  FV+ +NR  W PLY    R  RL
Sbjct: 524 TLQAHGLGAYITEATVAGDFHRVALGIAVMSAFVVVINRLFWRPLYALAERKFRL 578


>gi|28199540|ref|NP_779854.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1]
 gi|182682275|ref|YP_001830435.1| binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa M23]
 gi|28057655|gb|AAO29503.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1]
 gi|182632385|gb|ACB93161.1| binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa M23]
 gi|307578552|gb|ADN62521.1| ABC transporter nitrate permease [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 584

 Score =  555 bits (1430), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/576 (51%), Positives = 387/576 (67%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +  + P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+          +PL+  
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             +L + + ++R+        L  + R  S   D  W  V+  VA    +     +    
Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSTDANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|213968477|ref|ZP_03396620.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301384946|ref|ZP_07233364.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062022|ref|ZP_07253563.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302134333|ref|ZP_07260323.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926765|gb|EEB60317.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 584

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G  +   P +++   P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAAKSR+  
Sbjct: 45  GASQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAAKSRKAE 104

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS
Sbjct: 105 HVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD
Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ LFRP++ W++KFR E+T  
Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+  L  ++                LS  +    + L +I         ++   
Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
             V  ++D  W  +V    +  +     +I       D++    LG  TM RV+VLI IA
Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVGAFGLGLATMLRVIVLIAIA 393

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM+
Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+
Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW PL
Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573

Query: 578 YLYGTRCLRL 587
           Y +  R L L
Sbjct: 574 YGFAERRLSL 583


>gi|28872656|ref|NP_795275.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28855912|gb|AAO58970.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 584

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G  +   P +++   P++LD   LP+YA RTTLRM  A+  SL+FTFV ATLAAKSR+  
Sbjct: 45  GAGQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAAKSRKAE 104

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS
Sbjct: 105 HVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD
Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ LFRP++ W++KFR E+T  
Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+  L  ++                LS  +    + L +I         ++   
Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
             V  ++D  W  +V    +  +     +I       D++    LG  TM RV+VLI IA
Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVGAFGLGLATMLRVIVLIAIA 393

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM+
Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+
Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW PL
Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573

Query: 578 YLYGTRCLRL 587
           Y +  R L L
Sbjct: 574 YGFAERRLSL 583


>gi|71899312|ref|ZP_00681473.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|71730938|gb|EAO33008.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
          Length = 584

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/576 (51%), Positives = 387/576 (67%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +  + P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+          +PL+  
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQLPRSWVYDLICRTRLLK-------RLVAPLT-- 309

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             +L + + ++R+        L  + R  S   D  W  V+  VA    +     +    
Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|71274644|ref|ZP_00650932.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Dixon]
 gi|71899643|ref|ZP_00681797.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|170730910|ref|YP_001776343.1| putative nitrate transport system permease [Xylella fastidiosa M12]
 gi|71164376|gb|EAO14090.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Dixon]
 gi|71730595|gb|EAO32672.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|167965703|gb|ACA12713.1| putative nitrate transport system permease protein [Xylella
           fastidiosa M12]
          Length = 584

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/576 (51%), Positives = 386/576 (67%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN +DL+A  L++ +   LLHG +    P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNAYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIANQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+          +PL+  
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             +L + + ++R+        L  + RV S   D  W  V+  VA    +     +    
Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRVGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSAGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|167579935|ref|ZP_02372809.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 577

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/554 (50%), Positives = 364/554 (65%), Gaps = 18/554 (3%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G ++  +P        I+L   +LP Y  RT LRML+A+  S +FTF YA+LAAKSR  
Sbjct: 38  SGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALGASFVFTFAYASLAAKSRAA 97

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             VL+P+LD++QS+PILG+L+FTVV+F+++ PG   GAELAAIFAIFTSQ WNM FS YQ
Sbjct: 98  EAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELAAIFAIFTSQAWNMAFSFYQ 157

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG
Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVG 217

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           D  I LPG+G+Y+A AI E++L AI +A+  M   I LYDQLLFRPM+ W++KFR ++T 
Sbjct: 218 DLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTV 277

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQ 333
                 SW+L L  + +  + +G       +PL   + +  R   +LGV R    E  + 
Sbjct: 278 SGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAARARLSLGV-RLSARERSMS 329

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
             + +       + WF +    A+      +       ++ DV  V   G +T+ RV+VL
Sbjct: 330 RRAGR-------VVWFSLCAAGALYAGAALLRIAAPALSWSDVADVARNGALTLARVLVL 382

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I IA+ +W+PVG+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS
Sbjct: 383 IGIATAVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLS 442

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR I+LPGI PYYVTGAITA
Sbjct: 443 ALMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREIVLPGILPYYVTGAITA 502

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GGAWNASIVSE+  WG   L  +GLGAY+A +T  G +P + LGV  M   V+A+NR +
Sbjct: 503 SGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIALGVAAMSLLVIAMNRLM 562

Query: 574 WHPLYLYGTRCLRL 587
           W PLY +  R  RL
Sbjct: 563 WRPLYAFAERRSRL 576


>gi|83721275|ref|YP_441179.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|167618011|ref|ZP_02386642.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257140157|ref|ZP_05588419.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|83655100|gb|ABC39163.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 577

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/554 (50%), Positives = 363/554 (65%), Gaps = 18/554 (3%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G ++  +P        I+L   +LP Y  RT LRML+A+  S +FTF YA+LAAKSR  
Sbjct: 38  SGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALGASFVFTFAYASLAAKSRAA 97

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             VL+P+LD++QS+PILG+L+FTVV+F+++ PG   GAELAAIFAIFTSQ WNM FS YQ
Sbjct: 98  EAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELAAIFAIFTSQAWNMAFSFYQ 157

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG
Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVG 217

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           D  I LPG+G+Y+A AI E++L AI +A+  M   I LYDQLLFRPM+ W++KFR ++T 
Sbjct: 218 DLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTV 277

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQ 333
                 SW+L L  + +  + +G       +PL   + +  R   +LGV R    E  L 
Sbjct: 278 SGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAARARLSLGV-RLSARERSLS 329

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
             + +       + WF +    A+      +       ++ DV  V   G +T+ RV+VL
Sbjct: 330 RRAGR-------VVWFSLCAAGALYAGAALLRIAAPALSWSDVADVARNGALTLARVLVL 382

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I IA+ +W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS
Sbjct: 383 IGIATAVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFRLAPAIWLS 442

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR I+LPGI PYYVTGAITA
Sbjct: 443 PLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREIVLPGILPYYVTGAITA 502

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GGAWNASIVSE+  WG   L  +GLGAY+A +T  G +P + LGV  M   V+A+NR +
Sbjct: 503 SGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIALGVAAMSLLVIAMNRLM 562

Query: 574 WHPLYLYGTRCLRL 587
           W PLY +  R  RL
Sbjct: 563 WRPLYAFAERRSRL 576


>gi|165919264|ref|ZP_02219350.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|165917058|gb|EDR35662.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
          Length = 581

 Score =  551 bits (1421), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 284/572 (49%), Positives = 382/572 (66%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  AM
Sbjct: 20  PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E 
Sbjct: 80  FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN 
Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LYD
Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+    +FS L+ N    
Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFS-LAGNATVN 314

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            R   + +   P   ++   N +   +L I W   ++ GVA  +   S  +I+    + +
Sbjct: 315 WR---LFQHRRPRKLIE--PNYQFRRLLTIAWKVLLILGVAAALFLLS-KFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|153206202|ref|ZP_01945465.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212217904|ref|YP_002304691.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
 gi|120577332|gb|EAX33956.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012166|gb|ACJ19546.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
          Length = 581

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/572 (49%), Positives = 382/572 (66%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  AM
Sbjct: 20  PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E 
Sbjct: 80  FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN 
Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LYD
Sbjct: 200 MMSMSGSWIFLTASESISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+    +FS L+ N    
Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFS-LAGNATVN 314

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            R   + +   P   ++   N +   +L I W   ++ GVA  +   S  +I+    + +
Sbjct: 315 WR---LFQHRRPRKLIE--PNYQFRRLLTIAWKVLLILGVAAALFLLS-KFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|29655059|ref|NP_820751.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161829804|ref|YP_001597596.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|29542328|gb|AAO91265.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161761671|gb|ABX77313.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
          Length = 581

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/572 (49%), Positives = 380/572 (66%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  AM
Sbjct: 20  PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E 
Sbjct: 80  FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN 
Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LYD
Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+    +FS   N +   
Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSLAGNAIVNW 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375
                + +   P   ++   N +   +L I W   ++ GVA  +   S  +I+    + +
Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|212211812|ref|YP_002302748.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
 gi|212010222|gb|ACJ17603.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
          Length = 581

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/572 (48%), Positives = 379/572 (66%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  AM
Sbjct: 20  PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E 
Sbjct: 80  FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN 
Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSG W F+ ASE I + +  I LPGIGSY ALAI+  + +AI+Y ++ M  VI LYD
Sbjct: 200 MMSMSGSWIFLTASEAISIANHNIMLPGIGSYTALAIEHANKMAIIYVIVMMFIVIALYD 259

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+    +FS   N +   
Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSSAGNAIVNW 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375
                + +   P   ++   N +   +L I W   ++ GVA  +   S  +I+    + +
Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|154705925|ref|YP_001423658.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154355211|gb|ABS76673.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 581

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/572 (49%), Positives = 379/572 (66%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  AM
Sbjct: 20  PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E 
Sbjct: 80  FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN 
Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPLDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LYD
Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+    +FS   N +   
Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSLAGNAIVNW 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375
                + +   P   ++   N +   +L I W   ++ GVA  +   S  +I+    + +
Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI+SE  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIISEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LN  +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNCTMWRPLYRLAEERFRV 580


>gi|237810965|ref|YP_002895416.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|237503515|gb|ACQ95833.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
          Length = 621

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 275/550 (50%), Positives = 361/550 (65%), Gaps = 12/550 (2%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 83  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
                SW+L L  + +  + +G       +PL   + +  R    +    P         
Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGVRLPTR-----GR 370

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
            R   +  + W  +    A+      +       ++ D+  V   G +T+ RV+VLI +A
Sbjct: 371 ARAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVA 430

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI
Sbjct: 431 TVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMI 490

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGA
Sbjct: 491 LGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGA 550

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PL
Sbjct: 551 WNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPL 610

Query: 578 YLYGTRCLRL 587
           Y +  R  RL
Sbjct: 611 YAFAERRSRL 620


>gi|126440929|ref|YP_001057811.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126220422|gb|ABN83928.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
          Length = 577

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 278/556 (50%), Positives = 366/556 (65%), Gaps = 22/556 (3%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR  
Sbjct: 38  SGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAA 97

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQ
Sbjct: 98  QAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQ 157

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG
Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVG 217

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
              I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T 
Sbjct: 218 GLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTV 277

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQ 333
                 SW+L L  + +  + +G       +PL    +   +   +LGV          +
Sbjct: 278 SGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------R 320

Query: 334 LCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+
Sbjct: 321 LSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVL 380

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +W
Sbjct: 381 VLIGVATVVWVPAGVLIGLRPRATALVQPIAQFLAAFPANLLFPLAVFAIVRFGLAPAIW 440

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAI
Sbjct: 441 LSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAI 500

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR
Sbjct: 501 TASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNR 560

Query: 572 FLWHPLYLYGTRCLRL 587
            +W PLY +  R  RL
Sbjct: 561 LIWRPLYAFAERRSRL 576


>gi|254181699|ref|ZP_04888296.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184212237|gb|EDU09280.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 577

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/572 (48%), Positives = 374/572 (65%), Gaps = 22/572 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D ++ +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+  S 
Sbjct: 22  DAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASF 81

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIF
Sbjct: 82  VFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIF 141

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFTSQ WNM FS YQSL  +P DL+E S S R +GWQ+FW L VPF+MPGLVWN M+SM
Sbjct: 142 AIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMPGLVWNAMLSM 201

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           SGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLF
Sbjct: 202 SGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLF 261

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLC 317
           RPM+ W++KFR ++T       SW+L L  + +  + +G       +PL    +   +  
Sbjct: 262 RPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARAR 314

Query: 318 RTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            +LGV          +L +  R     +  + W  +    A+      +       ++ D
Sbjct: 315 ASLGV----------RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSD 364

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FP
Sbjct: 365 LADVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFP 424

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR
Sbjct: 425 LAVFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWR 484

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P +
Sbjct: 485 EVMLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRI 544

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 545 ALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 576


>gi|296115222|ref|ZP_06833863.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
 gi|295978323|gb|EFG85060.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
          Length = 573

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/575 (50%), Positives = 383/575 (66%), Gaps = 13/575 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P    R+ PN+FDL+  V+++G    L    +   VP        I LD   LP YA RT
Sbjct: 7   PTHGLRVRPNLFDLVGLVILMGFAVALATVGRHMLVPLSPATAQAIHLDPSWLPGYALRT 66

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T RM +A++ S++FTF YA  AAKSRR G +LVP+LDI+QS+PILGFLTFTVV+F+ L+P
Sbjct: 67  TFRMFAALLASVVFTFTYAVWAAKSRRAGQILVPVLDILQSVPILGFLTFTVVFFLGLFP 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+++GAELAAIF IFTSQ WNM FSMYQSL  +P DLEE +R F L+ WQ+FW L VPF+
Sbjct: 127 GRMMGAELAAIFTIFTSQAWNMAFSMYQSLRTVPADLEEAARCFGLTAWQRFWRLEVPFA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P LVWN M+SMSGGWF VV SE I VG+T I LPGIGSY+  AI  +DLLAILYA++TM
Sbjct: 187 IPSLVWNAMISMSGGWFMVVYSETITVGNTDIALPGIGSYVGTAIAHRDLLAILYAIVTM 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           L VI  YDQLLFRP++ WS +F +E T G    D WVL L R+T+ LR            
Sbjct: 247 LAVILAYDQLLFRPLVAWSARFSIEDTQGEAAPDPWVLALLRRTSLLRRA---------- 296

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
            S+ + +    +G +R     +   +  +     MLDI W+  + G  + +  + + Y  
Sbjct: 297 -SDALGRALTFIGWLRIGRAPS--DVTPSHMSGRMLDIAWWACLGGCTLVLGGKVLTYAA 353

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            HFT   V  V+ LG +T+ RV+V +++AS+IW+PVGIW+G     + + Q  AQ +AAF
Sbjct: 354 GHFTASQVFQVMGLGGLTLLRVLVTLLVASLIWVPVGIWLGLDARRARRAQFVAQFMAAF 413

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+FFPL V  +  +HLN N+WL+ LM+ GTQWYILFN++AGAS++P D  E A +F +
Sbjct: 414 PANLFFPLFVLFIVRFHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPTDLLEAARNFQV 473

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G  WW  ++LPGI P+++TGAITA GGAWNA+I +E+ASWG   LR  GLGAYIA++T 
Sbjct: 474 RGTLWWMRVMLPGIVPFFITGAITASGGAWNAAIATEMASWGSTTLRAQGLGAYIAQATI 533

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            G+   V LG+++M  FVL  NR +W PL  Y  R
Sbjct: 534 DGATDRVGLGMVVMSLFVLLFNRAVWRPLANYAAR 568


>gi|167822873|ref|ZP_02454344.1| putative transmembrane transporter [Burkholderia pseudomallei 9]
          Length = 577

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|53718355|ref|YP_107341.1| putative transmembrane transporter [Burkholderia pseudomallei
           K96243]
 gi|167814398|ref|ZP_02446078.1| putative transmembrane transporter [Burkholderia pseudomallei 91]
 gi|52208769|emb|CAH34706.1| putative transmembrane transporter [Burkholderia pseudomallei
           K96243]
          Length = 577

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|254187628|ref|ZP_04894140.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157935308|gb|EDO90978.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 621

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 83  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 365

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 366 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 425

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 426 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 485

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 486 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 545

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 546 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 605

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 606 IWRPLYAFAERRSRL 620


>gi|76811160|ref|YP_332348.1| putative transmembrane transporter [Burkholderia pseudomallei
           1710b]
 gi|76580613|gb|ABA50088.1| putative transmembrane transporter [Burkholderia pseudomallei
           1710b]
          Length = 576

 Score =  541 bits (1395), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 38  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 97

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 98  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 158 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 217

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 218 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 277

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 278 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 320

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 321 STRGRAWAVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 380

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 381 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 440

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 441 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 500

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 501 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 560

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 561 IWRPLYAFAERRSRL 575


>gi|78221745|ref|YP_383492.1| binding-protein dependent transport system inner membrane protein
           [Geobacter metallireducens GS-15]
 gi|78193000|gb|ABB30767.1| Binding-protein-dependent transport systems inner membrane
           component [Geobacter metallireducens GS-15]
          Length = 579

 Score =  541 bits (1395), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 291/583 (49%), Positives = 379/583 (65%), Gaps = 19/583 (3%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRT 68
           F  +   PN +DL AF LV+GII +L  G +E  +P      VP ++ D   LP YA RT
Sbjct: 10  FRGKLTTPNAWDLAAFFLVMGIIALLAWGSREMALPYVPGKTVPSLSPDPWHLPYYALRT 69

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +RM +A+ +SL FT  YATLAAKSRRLG +LVP LDI+QS+PILGFL+ TV  F++L+P
Sbjct: 70  VIRMGAALGLSLAFTLTYATLAAKSRRLGPILVPALDILQSVPILGFLSVTVTGFISLFP 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G ++G E A+IFAIFTSQ WNM FS YQS+  +P+DL E +  F LS W++FW +  PF 
Sbjct: 130 GSLLGVEAASIFAIFTSQAWNMAFSFYQSMKTVPKDLGEAATIFGLSPWKRFWRVEAPFG 189

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L+WN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI  QDL AI +A+ TM
Sbjct: 190 VPPLIWNIMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYMALAIHRQDLGAIGWALATM 249

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT----NFLRFIGYSSWN 304
             VIFLYDQL FRP++ W+ KFR+E T    P +SW+L +F +T      LR IG     
Sbjct: 250 ALVIFLYDQLFFRPLVAWAEKFRVELTESGAPPESWLLTIFTRTRLMGRLLRLIGALPAR 309

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
                    +   R+   IR   PE          V   +D  W  +    A+   W+ +
Sbjct: 310 LAERFPRRRRLPRRSRYPIR---PE----------VQRTIDRAWNAIFALAALYGLWK-L 355

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
              V+    ++VL V  LG  T+ RV VL+ +AS++WIPVG+ IG  P  ++++QP AQ 
Sbjct: 356 ATFVSVIPLREVLSVFGLGLATLARVTVLLALASLLWIPVGVRIGLNPRWATRVQPVAQF 415

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+FFP+VV  +  + LNP +W + LMI GTQWYILFNVIAGASA PND +E A+
Sbjct: 416 LAAFPANLFFPVVVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAT 475

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +  ++GW  WR ++LPGIFP  VTG +TA GG WNASIV+E+ SWG   L  TGLG+ IA
Sbjct: 476 NLGLSGWELWRRLLLPGIFPSLVTGLVTASGGTWNASIVAEMVSWGPTTLTATGLGSAIA 535

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             TE+G +P +VLG+ +M  FV+ LNR  W  LYL      RL
Sbjct: 536 RWTEQGDYPHIVLGIAVMSIFVVCLNRLFWRRLYLLAQTRYRL 578


>gi|126452920|ref|YP_001065052.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242317395|ref|ZP_04816411.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|126226562|gb|ABN90102.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242140634|gb|EES27036.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
          Length = 577

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|254260499|ref|ZP_04951553.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254219188|gb|EET08572.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 577

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|226196748|ref|ZP_03792328.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931279|gb|EEH27286.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 577

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVI+GASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVISGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|254196922|ref|ZP_04903346.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|169653665|gb|EDS86358.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 621

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 83  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 365

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 366 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 425

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 426 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 485

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 486 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 545

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 546 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 605

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 606 IWRPLYAFAERRSRL 620


>gi|167892962|ref|ZP_02480364.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
          Length = 577

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/557 (50%), Positives = 367/557 (65%), Gaps = 26/557 (4%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWF--CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            +  R     +  + W   C    V  GIA   +       ++ D+  V   G +T+ RV
Sbjct: 322 STRGRAWAGRIARVAWLAPCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARV 379

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +
Sbjct: 380 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAI 439

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGA
Sbjct: 440 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 499

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+N
Sbjct: 500 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 559

Query: 571 RFLWHPLYLYGTRCLRL 587
           R +W PLY +  R  RL
Sbjct: 560 RLIWRPLYAFAERRSRL 576


>gi|217420095|ref|ZP_03451601.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|217397399|gb|EEC37415.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 577

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/557 (50%), Positives = 367/557 (65%), Gaps = 26/557 (4%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWF--CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            +  R     +  + W   C    V  GIA   +       ++ D+  V   G +T+ RV
Sbjct: 322 STRGRAWAGRIARVAWLAPCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARV 379

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +
Sbjct: 380 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAI 439

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGA
Sbjct: 440 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 499

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+N
Sbjct: 500 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 559

Query: 571 RFLWHPLYLYGTRCLRL 587
           R +W PLY +  R  RL
Sbjct: 560 RLIWRPLYAFAERRSRL 576


>gi|134279659|ref|ZP_01766371.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|167901440|ref|ZP_02488645.1| putative transmembrane transporter [Burkholderia pseudomallei NCTC
           13177]
 gi|134248859|gb|EBA48941.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 577

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/555 (49%), Positives = 364/555 (65%), Gaps = 22/555 (3%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334
                SW+L L  + +  + +G       +PL    +   +   +LGV          +L
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321

Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +  R     +  + W  +    A+      +       ++ D+  V   G +T+ RV+V
Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WL
Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 441

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAIT
Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE+  WGH      GLGAY+A +T  GS+P + LGV  M   V+A+NR 
Sbjct: 502 ASGGAWNASIVSELVVWGHTTRDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561

Query: 573 LWHPLYLYGTRCLRL 587
           +W PLY +  R  RL
Sbjct: 562 IWRPLYAFAERRSRL 576


>gi|54293082|ref|YP_125497.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens]
 gi|54296116|ref|YP_122485.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris]
 gi|296105630|ref|YP_003617330.1| ABC transporter, permease protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|53749901|emb|CAH11283.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris]
 gi|53752914|emb|CAH14350.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens]
 gi|295647531|gb|ADG23378.1| ABC transporter, permease protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|307608865|emb|CBW98263.1| hypothetical protein LPW_01211 [Legionella pneumophila 130b]
          Length = 579

 Score =  535 bits (1378), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/572 (47%), Positives = 377/572 (65%), Gaps = 14/572 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +LP YA R
Sbjct: 11  PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV  F++L+
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS  FRLS WQ+FW + VPF
Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEVPF 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           SM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+ YA+LT
Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +  + W   +
Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304

Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             +N+ V      +G ++     +F       +    LD  W  +V    I   W  + +
Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP  Q +A
Sbjct: 358 ILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D    A +F
Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG YI  S
Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           T  G FP++ LG  +MC +VLA N  +W PLY
Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 18/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +I + +    VG            + P   +L + P   F  L ++   + H
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L PN  L     S+  IF  Q W + F         P+D  EV++ F ++ W R+W+  +
Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEV 186

Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                P+ ++G     + +   +W   ++SE  S  H ++R  G+G+YIA +  +     
Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           V   +L M   +   ++ L+ PL  +  +
Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270


>gi|52840376|ref|YP_094175.1| ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627487|gb|AAU26228.1| ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 579

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/572 (47%), Positives = 377/572 (65%), Gaps = 14/572 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +LP YA R
Sbjct: 11  PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV  F++L+
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS  FRLS WQ+FW + VPF
Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEVPF 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           SM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+ YA+LT
Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +  + W   +
Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304

Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             +N+ V      +G ++     +F       +    LD  W  +V    I   W  + +
Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP  Q +A
Sbjct: 358 ILAELKVSDIFHVFLLGAATGSRVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D    A +F
Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG YI  S
Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           T  G FP++ LG  +MC +VLA N  +W PLY
Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 18/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +I + +    VG            + P   +L + P   F  L ++   + H
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L PN  L     S+  IF  Q W + F         P+D  EV++ F ++ W R+W+  +
Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEV 186

Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                P+ ++G     + +   +W   ++SE  S  H ++R  G+G+YIA +  +     
Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           V   +L M   +   ++ L+ PL  +  +
Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270


>gi|148358279|ref|YP_001249486.1| ABC transporter permease [Legionella pneumophila str. Corby]
 gi|148280052|gb|ABQ54140.1| ABC transporter, permease protein [Legionella pneumophila str.
           Corby]
          Length = 579

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/572 (47%), Positives = 376/572 (65%), Gaps = 14/572 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +LP YA R
Sbjct: 11  PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV  F++L+
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS   RLS WQ+FW + VPF
Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFWKVEVPF 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           SM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+ YA+LT
Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +  + W   +
Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304

Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             +N+ V      +G ++     +F       +    LD  W  +V    I   W  + +
Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP  Q +A
Sbjct: 358 ILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D    A +F
Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG YI  S
Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           T  G FP++ LG  +MC +VLA N  +W PLY
Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 18/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +I + +    VG            + P   +L + P   F  L ++   + H
Sbjct: 69  TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L PN  L     S+  IF  Q W + F         P+D  EV++   ++ W R+W+  +
Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFWKVEV 186

Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                P+ ++G     + +   +W   ++SE  S  H ++R  G+G+YIA +  +     
Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           V   +L M   +   ++ L+ PL  +  +
Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270


>gi|326403633|ref|YP_004283715.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325050495|dbj|BAJ80833.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 577

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 292/577 (50%), Positives = 384/577 (66%), Gaps = 12/577 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  R  PN +D+ A  LV  ++  + H  Q T  P   +    I L+   LP YA R
Sbjct: 7   PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM +A+++SL FTF  ATLAAKSRR  ++++PILDI+QSIPILGF++FTV++F++L+
Sbjct: 67  TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ +GAELA +F IFTSQ WNM FS YQSL   P DL E  RSF L+ WQ+FW L VPF
Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PGLVWN M+SMSGGWFFVVASE I VG T   LPGIGSY+A+A++ +D  AI+YA+L 
Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI LYDQLLFRP++ WS KFR E        + WVL L R+T  LR  G   W    
Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVLRLLRRTFLLRAAG--DW---- 300

Query: 308 PLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            LS+    + R  LG     F    L   + +    + D  ++ VV   A   A Q + +
Sbjct: 301 -LSDQFAHVVRLRLGRADRKFGSAGLDRATGR----IGDAAFYAVVIIAAGAAAAQVVEF 355

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                 + D+   + L   T+ RV+  ++I+ +IW+PVG+W+GFRP  +  +QP AQ LA
Sbjct: 356 CARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLA 415

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F
Sbjct: 416 AFPANLVFPVVVAGIVHFRLTPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNF 475

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++G  WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH  L   GLGAYIA++
Sbjct: 476 RLSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQA 535

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           T  G+   +VLGV +M  FVL  NR +W PLY Y +R
Sbjct: 536 TMAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASR 572


>gi|330994257|ref|ZP_08318185.1| Glycine betaine/L-proline transport system permease protein proW
           [Gluconacetobacter sp. SXCC-1]
 gi|329758724|gb|EGG75240.1| Glycine betaine/L-proline transport system permease protein proW
           [Gluconacetobacter sp. SXCC-1]
          Length = 572

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/581 (48%), Positives = 376/581 (64%), Gaps = 35/581 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN+ DLL  + ++    ++    +   VP    +   I L    LP YA RTTLRM 
Sbjct: 11  RVRPNLADLLGLLAIMAGAAVIATAGRHMLVPIPASETGTIHLSPAWLPAYAVRTTLRMF 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SL+FTF YA  AAKSRR   VL+P+LDI+QS+PILGFLTFTVV+F+ L+PG+++G
Sbjct: 71  AALAASLVFTFTYAVWAAKSRRAAQVLIPLLDILQSVPILGFLTFTVVFFLGLFPGRMMG 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIF IFTSQ WNM F+MYQ+L  +P DLEE +R F L+ WQ+FW L VPF++P LV
Sbjct: 131 AELAAIFTIFTSQAWNMAFAMYQALRTVPPDLEEAARCFGLTPWQRFWRLEVPFAIPSLV 190

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN M+SMSGGWF VV SE I VG T I LPGIGSY+ +AI+++++ AI YA++ ML VI 
Sbjct: 191 WNTMISMSGGWFMVVYSETITVGSTDIALPGIGSYVGVAIEQRNIGAIFYAIIAMLAVIT 250

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL-----------YLFRKTNFLRFIGYSS 302
           +YDQLLFRP++ WS +F  +    +   D WVL           +  R  + +  IG   
Sbjct: 251 IYDQLLFRPLVAWSARFSTDDGATMAAPDPWVLTLLRRTHLLRQFCLRLGDTMTRIG--- 307

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
           W    P         R    +R   P            S ++D  W   +   A+ I W+
Sbjct: 308 WLAIGP---------RPSQPVRAIIP------------SRLMDGAWGMALAVCALTIGWK 346

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  Y  +H++   VL+V+ LG IT+ RV+  +I+AS++W+P+GIW+G  P  +   Q  A
Sbjct: 347 TWTYGSSHYSVAQVLHVVMLGGITLLRVMGTVIVASLVWVPLGIWLGLSPRRARHAQMAA 406

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q +AAFPAN+FFPL+V  + ++HLN N+WL+ LM+ GTQWYILFN++AGAS++P D  E 
Sbjct: 407 QFMAAFPANLFFPLMVIGIVHWHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPGDLLEA 466

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +FH+ GW WWR I+LPGI PY++TGA+TA GGAWNA+I +EVASWG   L   GLGAY
Sbjct: 467 ARNFHVRGWLWWRRIMLPGIMPYFITGALTASGGAWNAAIATEVASWGDTTLSAQGLGAY 526

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           IA +T  G+   V LG+ IM  FVL LNR LW PL  Y  R
Sbjct: 527 IAHATVAGATDRVGLGMAIMAGFVLLLNRVLWRPLANYAAR 567


>gi|148260439|ref|YP_001234566.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|146402120|gb|ABQ30647.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
          Length = 577

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 292/577 (50%), Positives = 384/577 (66%), Gaps = 12/577 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  R  PN +D+ A  LV  ++  + H  Q T  P   +    I L+   LP YA R
Sbjct: 7   PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM +A+++SL FTF  ATLAAKSRR  ++++PILDI+QSIPILGF++FTV++F++L+
Sbjct: 67  TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ +GAELA +F IFTSQ WNM FS YQSL   P DL E  RSF L+ WQ+FW L VPF
Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PGLVWN M+SMSGGWFFVVASE I VG T   LPGIGSY+A+A++ +D  AI+YA+L 
Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI LYDQLLFRP++ WS KFR E        + WVL L R+T  LR  G   W    
Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVLRLLRRTFLLRAAG--DW---- 300

Query: 308 PLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            LS+    + R  LG     F    L   + +    + D  ++ VV   A   A Q + +
Sbjct: 301 -LSDQFAHVVRLRLGRADRKFGSAGLDRATGR----IGDAAFYAVVIIAAGAAAAQVVEF 355

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                 + D+   + L   T+ RV+  ++I+ +IW+PVG+W+GFRP  +  +QP AQ LA
Sbjct: 356 CARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLA 415

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F
Sbjct: 416 AFPANLVFPVVVAGIVHFRLAPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNF 475

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++G  WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH  L   GLGAYIA++
Sbjct: 476 RLSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQA 535

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           T  G+   +VLGV +M  FVL  NR +W PLY Y +R
Sbjct: 536 TMAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASR 572


>gi|172065456|ref|YP_001816168.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171997698|gb|ACB68615.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 577

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/574 (48%), Positives = 381/574 (66%), Gaps = 18/574 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           P   DL+A ++V+G +  LL GI   +   P  +     I+L   +LP Y  RT  RM +
Sbjct: 18  PGWRDLVATLIVVGFL--LLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTLRTVARMFA 75

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ S+ FTFV+AT AA+SRR   +L+P+LD +QS+PILG+L+FTV+ F++L+PG+++GA
Sbjct: 76  ALLASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSLFPGRILGA 135

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW
Sbjct: 136 ECAAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVPFAMPGLVW 195

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           N MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M+  I L
Sbjct: 196 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMIVAIVL 255

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQLLFRP++ WS +FR         + SW+L LF+++   R++  +S     P+   + 
Sbjct: 256 YDQLLFRPLVSWSERFRYGDAAPAIASRSWMLDLFQRS---RWVARAS----GPVRALLH 308

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTY 373
           +  R    +R   P    ++   +      D+ WF  +CG      A++         T+
Sbjct: 309 RAARAR--LRGFTPAWRGRIALPRHTG---DVLWFA-MCGAGCAYAAYELFRLGRTTLTW 362

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+  V   G +T  RV VL+++AS++W+P+GI IG RP ++++IQP  Q LAAFPAN+ 
Sbjct: 363 TDLRVVAAAGALTFARVTVLVMLASVLWVPIGISIGLRPDVAARIQPVTQFLAAFPANLL 422

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +    L P++WL LLMI G QWY+LFNVIAGASAFP D +E A+ F +    W
Sbjct: 423 FPVAVFAIVRLRLAPDIWLCLLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPVTW 482

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR ++LPG+ PY+VTGAITA GGAWNASIV+E  SWG+  L   GLGAYIA  T+ G +P
Sbjct: 483 WRRVMLPGVLPYFVTGAITASGGAWNASIVAEAVSWGNTRLNAGGLGAYIARMTDAGDYP 542

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + LGV +M  FV+A NRF+W PLY +  R  RL
Sbjct: 543 RIALGVAVMSLFVIATNRFVWRPLYAFAERRTRL 576


>gi|298506983|gb|ADI85706.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400]
          Length = 578

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/576 (49%), Positives = 375/576 (65%), Gaps = 17/576 (2%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
            PN++D+ AF+LV+G++ +L  G +E   T VP  IV    ++LD   LP YA RT +RM
Sbjct: 15  LPNLWDVAAFLLVLGVVALLAWGSREMAATFVPGKIVP--SLSLDPRHLPYYALRTVIRM 72

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +A+ +SL FT  Y TLAAKSRRL  +LVP LDI+QS+PILGFL+ TV  F+ L+PG ++
Sbjct: 73  GAALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSVPILGFLSVTVTGFIALFPGSLM 132

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNM FS YQSL  IPRDL E +  F LSGWQ+FW +  PF++P L
Sbjct: 133 GVEAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPL 192

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           VWN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI  QD+ AI +A+ TML VI
Sbjct: 193 VWNIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVALAIHRQDMGAIAWALATMLAVI 252

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSN 311
            LYDQL FRP++ W+ KFR+E +      +SW L LF +T FL R +  +          
Sbjct: 253 LLYDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFARTRFLARALSLAGALPELLTER 312

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             ++     G  R             +  + ++D  W       A+   W+ +   V+  
Sbjct: 313 LPRRRRPRTGEHRHR----------GRPAARIMDRIWNAAFAVAALWALWK-LARFVSVI 361

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + ++L V  LG  TM RV VL+I+AS+ W+P+G+ IG  P  ++++QP AQ LAAFPAN
Sbjct: 362 PFGEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPAN 421

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP  V  +  + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++  ++GW
Sbjct: 422 LLFPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAANLGLSGW 481

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             WR ++LPGIFP  +TG +TA GG WNASIV+EV SWG   L  TGLG+ IA  TE+G 
Sbjct: 482 ELWRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSWGPTTLTATGLGSAIARWTEQGD 541

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P +VLG+ +M  +V+ LNRF W  LYL      RL
Sbjct: 542 YPHIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 577


>gi|299065148|emb|CBJ36312.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum CMR15]
          Length = 585

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/577 (47%), Positives = 376/577 (65%), Gaps = 23/577 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++          S L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVK----------SLLERTAALA 315

Query: 317 CRTL--GVIRFH----FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
            RTL  G  R          F++L    RV+   D+    ++   A+   W  + ++ + 
Sbjct: 316 ERTLAWGAERTRPKASGSNGFVRLPWAGRVA---DV----IILLAALAAVWHILQFVRSE 368

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             + +V  V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAFPA
Sbjct: 369 VGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPA 428

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FPLVV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +  + G
Sbjct: 429 NLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNLGLRG 488

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  W+  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG
Sbjct: 489 WLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKG 548

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP + LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 549 DFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 585


>gi|300689778|ref|YP_003750773.1| binding-protein-dependent transporter [Ralstonia solanacearum
           PSI07]
 gi|299076838|emb|CBJ49450.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum PSI07]
          Length = 586

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/578 (47%), Positives = 375/578 (64%), Gaps = 24/578 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-----AIGIAWQSIGYIVN 369
            RTL  G  R   P+       + R+       W   V  V     A+  AW  + ++ +
Sbjct: 316 ERTLAWGAERTR-PKAHTNNSGSPRLP------WAGRVADVIILLIALAAAWHILQFVRS 368

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + +V  V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAFP
Sbjct: 369 EVGWSEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFP 428

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN+ FPLVV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +F + 
Sbjct: 429 ANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLR 488

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T K
Sbjct: 489 GWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAK 548

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G FP + LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 549 GDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586


>gi|254497295|ref|ZP_05110103.1| ABC transporter, permease protein [Legionella drancourtii LLAP12]
 gi|254353523|gb|EET12250.1| ABC transporter, permease protein [Legionella drancourtii LLAP12]
          Length = 580

 Score =  525 bits (1352), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/568 (48%), Positives = 369/568 (64%), Gaps = 20/568 (3%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           F N +DLL  +L+  ++  L     +   P  + D +PI+L   +LP YA RT LR+  A
Sbjct: 18  FINRWDLLLLILIFAVLFFLGWAGSQMATPYQLGDQIPISLVPENLPFYALRTVLRLFIA 77

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +  S+LFTF    LAAK+RR   V++P +DI+QSIP+L FL+ TV  F++L+P  ++G E
Sbjct: 78  LFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSFLSITVTGFIHLFPHSLLGPE 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A+IFAIF +QVWNMTF  YQSL  IP DL+EV+  FRLS WQ+FW L VPFSM GL+WN
Sbjct: 138 CASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFWKLEVPFSMSGLLWN 197

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           MM+SMS  WFFVV SE I V    I LPGIGSYIALAI+++DL A+ YA+LTM+ VIFLY
Sbjct: 198 MMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHAVGYAILTMVIVIFLY 257

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQ+LFRP+I WS KF+ E +       SW++   R +  ++         F+ + +    
Sbjct: 258 DQILFRPLIAWSEKFKFEPSPDESEYQSWLVDWIRCSRLMK--------RFTEIIDIFTN 309

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-----FCVVCGVAIGIAWQSIGYIVNH 370
                   R   P+   ++  + +    +D FW     FCV+ G      W  + +I+  
Sbjct: 310 SFVNARWFRIGEPKAIKEI--DFKRQKRIDRFWSTMVLFCVLSG-----GWFLLRFILAE 362

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               D+L+V  LG  T  RV+ LI+++S+IWIPVG+WIG RP I+ +IQP  Q +AAFPA
Sbjct: 363 LKVSDILHVFLLGAATGTRVIALIVLSSLIWIPVGVWIGLRPRIAQRIQPVIQFVAAFPA 422

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+F+PL V  +  ++LN  +W++ LMI GTQWYILFNVIAGAS  P +    A +F + G
Sbjct: 423 NLFYPLFVIAIVEFNLNVEIWVTPLMILGTQWYILFNVIAGASTIPRELYLAADNFGLKG 482

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W WW+ ++LPGIFP+Y+TGAITA GGAWNASIV+E  SWG++ L+ TGLGAYI  ST  G
Sbjct: 483 WLWWKRLVLPGIFPFYITGAITAAGGAWNASIVAEWVSWGNVTLKATGLGAYIQASTTIG 542

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            FP++ LG  +MC +VL  N  +W PLY
Sbjct: 543 DFPQIALGTAMMCLYVLTFNHLIWRPLY 570



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 18/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +  + +    VG+           I P   +L + P   F  L ++   + H
Sbjct: 70  TVLRLFIALFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSF--LSITVTGFIH 127

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L P+  L     S+  IF  Q W + F         P+D +EVA+ F ++ W R+W+  +
Sbjct: 128 LFPHSLLGPECASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFWKLEV 187

Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                P+ ++G     + +   +W   ++SE  S  H ++R  G+G+YIA + ++     
Sbjct: 188 -----PFSMSGLLWNMMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHA 242

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           V   +L M   +   ++ L+ PL  +  +
Sbjct: 243 VGYAILTMVIVIFLYDQILFRPLIAWSEK 271


>gi|326314965|ref|YP_004232637.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371801|gb|ADX44070.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 578

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/562 (47%), Positives = 371/562 (66%), Gaps = 11/562 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D     LV+  + +L +G  +   P ++ D++P++LD   LP Y  RTTLRM  A+
Sbjct: 19  PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F  V+A LAAK R    VLVP+LDI+QSIPILGFL+ TV  F+ L+PG ++G E 
Sbjct: 79  GASLIFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQSL  +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM
Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPG+GSYIA+AI+ +DL AI +A+  ML  I LYD
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E  +      SW+L   R+    + +  + W          ++L
Sbjct: 259 QLLFRPLVAWADKFRFEEGSSDAAPRSWLLDWLRRARATQTV--AGW--------CQRQL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL + +       ++       +    ++   +  GV   IA + + ++     + +V
Sbjct: 309 GRTLTLFKRSHDGTSIRARPPAPSARAERVWDAVLAAGVLFAIA-RLVQFVHTEVGWHEV 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++V  LG  T+ RV+VLI +A+++W+P+G+WIG  P  + ++Q  AQ LAAFPAN+FFP+
Sbjct: 368 VHVFTLGGYTLVRVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ +  A +  ++GW  W+ 
Sbjct: 428 AVMLVVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLKWKR 487

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +LP +FP +VTGAITA GG+WNASIV+E  +WG   L+  GLG+YIA+ T  G FP + 
Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTATGDFPRIA 547

Query: 557 LGVLIMCCFVLALNRFLWHPLY 578
           LG+  M  FV+ LN FLW  LY
Sbjct: 548 LGIGAMVVFVMGLNHFLWRRLY 569



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F++       P + +E A  F ++GW R+WR + LP   P  +   
Sbjct: 140 AIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWR-LELPFAMPGLLWNM 198

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +  G W   + SE  S  H  ++  G+G+YIA + E    P +   +  M   +L  +
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258

Query: 571 RFLWHPLYLYGTR 583
           + L+ PL  +  +
Sbjct: 259 QLLFRPLVAWADK 271


>gi|17548088|ref|NP_521490.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430395|emb|CAD16868.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 586

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/579 (47%), Positives = 377/579 (65%), Gaps = 26/579 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++          S L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVK----------SLLERTAALA 315

Query: 317 CRTL--GVIRFHFPE------NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
            RTL  G  R   P+      +F++L    RV+ ++ +              W  + ++ 
Sbjct: 316 ERTLAWGAERTR-PKASSGGNSFVRLPWAGRVADLIILLAALAAV-------WHILQFVR 367

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   + +V  V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAF
Sbjct: 368 SEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAF 427

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+ FPLVV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +F +
Sbjct: 428 PANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGL 487

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T 
Sbjct: 488 RGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTA 547

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           KG FP + LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 548 KGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586


>gi|162147550|ref|YP_001602011.1| glycine betaine transport system permease [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545655|ref|YP_002277884.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786127|emb|CAP55709.1| putative glycine betaine transport system permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533332|gb|ACI53269.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
          Length = 575

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 286/586 (48%), Positives = 384/586 (65%), Gaps = 22/586 (3%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           LP   SR   PN+FDL A + ++G+  +L    +    P    +   I LD   LP YA 
Sbjct: 6   LPAPSSRPARPNVFDLAALLCIMGLAVVLGTAGRHMLAPISAPNAATIHLDPAWLPGYAV 65

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RTTLRM +A+  SL FTF YA  AAKS R G+VLVP+LD++QS+PILGFLTFTVV+FM L
Sbjct: 66  RTTLRMFAALGASLFFTFTYAVWAAKSPRAGLVLVPVLDVLQSVPILGFLTFTVVFFMGL 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +PG+++GAELAAIF IFTSQ WNM FSMYQSL  +P DL+EV+R F L+GWQKFW L VP
Sbjct: 126 FPGRILGAELAAIFTIFTSQAWNMAFSMYQSLRAVPPDLDEVARCFGLTGWQKFWRLEVP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           F++PGLVWN M+SMSGGWF VV SE I VG+T + LPGIGSY+  AI ++DL A+LYA++
Sbjct: 186 FAVPGLVWNAMISMSGGWFMVVYSETITVGNTNVLLPGIGSYVGTAIAQRDLWAVLYAIV 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            M+ VI  YDQL+FRP++ WS +F      G   +D W+L L R+T  LR I        
Sbjct: 246 AMMVVILAYDQLVFRPLVAWSGRFAATGIEGASASDPWLLVLLRRTALLRRI-------- 297

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML-----DIFWFCVVCGVAIGIAW 361
              ++ +      +G ++        +  S+ R + ++     D+ W   +  ++ G AW
Sbjct: 298 ---TDAIGDGLTAIGGLKLG------RRPSDARRTPLVPDRIRDVVWAVGLAMLSGGAAW 348

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q   Y     +  + L+V+ LG +T+ RVV ++++AS+IW+P G+W+G  P  + + Q  
Sbjct: 349 QVWLYARATISMAEFLHVVSLGGLTLARVVAMVLLASLIWVPAGVWLGLDPVRARRAQFI 408

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ +AAFPAN+FFP+ V  + ++HL+ ++WL+ LMI GTQWYILFNV+AGA+++P D  E
Sbjct: 409 AQFMAAFPANLFFPIFVLFIVHFHLSSDIWLTPLMILGTQWYILFNVVAGAASYPADLLE 468

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA S  + G  WW  +ILPGI P+Y+TGAITA GGAWNA+I +EVASWG  HL   GLGA
Sbjct: 469 VARSLQVGGRLWWLRVILPGIVPFYITGAITASGGAWNAAIAAEVASWGDDHLSAHGLGA 528

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           YIA +T  G    V LG+ +M  FVL  NR +W PL  Y  R   L
Sbjct: 529 YIAHATVAGDTAHVGLGMTVMAAFVLLFNRAVWRPLAEYARRHFTL 574


>gi|39998041|ref|NP_953992.1| ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39984986|gb|AAR36342.1| ABC transporter, permease protein [Geobacter sulfurreducens PCA]
          Length = 538

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/550 (49%), Positives = 356/550 (64%), Gaps = 14/550 (2%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +  T VP  IV    ++LD   LP YA RT +RM +A+ +SL FT  Y TLAAKSRRL  
Sbjct: 1   MAATFVPGKIVP--SLSLDPRHLPYYALRTVIRMGAALCLSLAFTLTYGTLAAKSRRLSP 58

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +LVP LDI+QS+PILGFL+ TV  F+ L+PG ++G E A+IFAIFTSQ WNM FS YQSL
Sbjct: 59  ILVPTLDILQSVPILGFLSVTVTGFIALFPGSLMGVEAASIFAIFTSQAWNMAFSFYQSL 118

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             IPRDL E +  F LSGWQ+FW +  PF++P LVWN+MMS+SGGWFFVVASE I VG T
Sbjct: 119 KTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPLVWNIMMSVSGGWFFVVASEAITVGKT 178

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
            + LPGIGSY+ALAI  QD+ AI +A+ TML VI LYDQL FRP++ W+ KFR+E +   
Sbjct: 179 AVTLPGIGSYVALAIHRQDMGAIAWALATMLAVILLYDQLFFRPLVAWAEKFRVELSQAR 238

Query: 279 YPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
              +SW L LF +T FL R +  +            ++     G  R             
Sbjct: 239 IAPESWCLTLFARTRFLARALSLAGALPELLTERLPRRRRPRTGEHRHR----------G 288

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +  + ++D  W       A+   W+ +   V+   + ++L V  LG  TM RV VL+I+A
Sbjct: 289 RPAARIMDRIWNAAFAVAALWALWK-LARFVSVIPFGEILSVFGLGLATMARVAVLLIMA 347

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+ W+P+G+ IG  P  ++++QP AQ LAAFPAN+ FP  V  +  + LNP +W + LMI
Sbjct: 348 SLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPANLLFPAAVVLIVRFRLNPEIWTAPLMI 407

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA PND +E A++  ++GW  WR ++LPGIFP  +TG +TA GG 
Sbjct: 408 LGTQWYILFNVIAGASAIPNDLREAAANLGLSGWELWRRLLLPGIFPSLITGLVTASGGT 467

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           WNASIV+EV SWG   L  TGLG+ IA  TE+G +P +VLG+ +M  +V+ LNRF W  L
Sbjct: 468 WNASIVAEVVSWGPTTLTATGLGSAIARWTEQGDYPHIVLGIAVMSMYVVCLNRFFWRRL 527

Query: 578 YLYGTRCLRL 587
           YL      RL
Sbjct: 528 YLLAQTRYRL 537


>gi|189348224|ref|YP_001941420.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|189338362|dbj|BAG47430.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 577

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/576 (47%), Positives = 374/576 (64%), Gaps = 22/576 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           P   DL A ++V+G +  LL GI  ++   P  +     I+L   +LP Y  RT  RM +
Sbjct: 18  PGWRDLAAMLIVVGFL--LLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFA 75

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA
Sbjct: 76  ALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 135

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW
Sbjct: 136 ECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVW 195

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           N MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M   I L
Sbjct: 196 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVL 255

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQLLFRP++ WS +FR         + SW+L LF ++   R++G +S            
Sbjct: 256 YDQLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRS---RWMGRAS-----------G 301

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHF 371
            +   L       P  F+    ++ V      D+ WF  +CG      A++         
Sbjct: 302 PVRALLRRAARARPRGFMSAWRDRIVLPPRTGDVLWFA-LCGAGCAYAAYELFRLGRATL 360

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+ D+  V   G +T  RV VL+ +AS+IW+P+GI IG RP ++++IQP  Q LAAFP N
Sbjct: 361 TWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTN 420

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  +    L P++WL  LMI G QWY+LFNVIAGASAFP D +E A+ F +   
Sbjct: 421 LLFPVAVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPA 480

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR+++LPG+ PY+VTGAI A GGAWNASIV+E  SWG   L   GLGAYIA  T+ G 
Sbjct: 481 TWWRHVMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGD 540

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P + LGV +M   V+A NR +W P+Y +  R  RL
Sbjct: 541 YPRIALGVAVMSLLVIATNRLVWRPMYAFAERRTRL 576


>gi|120608820|ref|YP_968498.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120587284|gb|ABM30724.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 578

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 267/562 (47%), Positives = 369/562 (65%), Gaps = 11/562 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D     LV+  + +L +G  +   P ++ D++P++LD   LP Y  RTTLRM  A+
Sbjct: 19  PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F  V+A LAAK R    VLVP+LDI+QSIPILGFL+ TV  F+ L+PG ++G E 
Sbjct: 79  GASLVFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQSL  +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM
Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPG+GSYIALAI+ +DL  I +A+  ML  I LYD
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E  +      SW+L   R+    + +  + W          ++L
Sbjct: 259 QLLFRPLVAWADKFRFEEGSADAAPRSWLLDWLRRARATQTV--AGW--------CQRQL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL + R       ++       +    ++   +  GV   IA + + ++     + +V
Sbjct: 309 GRTLTLFRRSHDGTSIRARPPAPSARAERVWDAVLAAGVLFAIA-RLVQFVHTEVGWHEV 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++V  LG  T+ RV+VLI +A+++W+P+G+WIG  P  + ++Q  AQ LAAFPAN+FFP+
Sbjct: 368 VHVFTLGGYTLARVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ +  A +  ++GW  W+ 
Sbjct: 428 AVMLAVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLQWKR 487

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +LP +FP +VTGAITA GG+WNASIV+E  +WG   L+  GLG+YIA+ T  G FP + 
Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTAAGDFPRIA 547

Query: 557 LGVLIMCCFVLALNRFLWHPLY 578
           LG+  M  FV+ LN F+W  LY
Sbjct: 548 LGIGAMVVFVMGLNHFVWRRLY 569



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F++       P + +E A  F ++GW R+WR + LP   P  +   
Sbjct: 140 AIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWR-LELPFAMPGLLWNM 198

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +  G W   + SE  S  H  ++  G+G+YIA + E    P +   +  M   +L  +
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258

Query: 571 RFLWHPLYLYGTR 583
           + L+ PL  +  +
Sbjct: 259 QLLFRPLVAWADK 271


>gi|161522946|ref|YP_001585875.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|160346499|gb|ABX19583.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
          Length = 600

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/576 (47%), Positives = 374/576 (64%), Gaps = 22/576 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           P   DL A ++V+G +  LL GI  ++   P  +     I+L   +LP Y  RT  RM +
Sbjct: 41  PGWRDLAAMLIVVGFL--LLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFA 98

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA
Sbjct: 99  ALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 158

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW
Sbjct: 159 ECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVW 218

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           N MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M   I L
Sbjct: 219 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVL 278

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQLLFRP++ WS +FR         + SW+L LF ++   R++G +S            
Sbjct: 279 YDQLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRS---RWMGRAS-----------G 324

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHF 371
            +   L       P  F+    ++ V      D+ WF  +CG      A++         
Sbjct: 325 PVRALLRRAARARPRGFMSAWRDRIVLPPRTGDVLWFA-LCGAGCAYAAYELFRLGRATL 383

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+ D+  V   G +T  RV VL+ +AS+IW+P+GI IG RP ++++IQP  Q LAAFP N
Sbjct: 384 TWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTN 443

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  +    L P++WL  LMI G QWY+LFNVIAGASAFP D +E A+ F +   
Sbjct: 444 LLFPVAVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPA 503

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR+++LPG+ PY+VTGAI A GGAWNASIV+E  SWG   L   GLGAYIA  T+ G 
Sbjct: 504 TWWRHVMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGD 563

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P + LGV +M   V+A NR +W P+Y +  R  RL
Sbjct: 564 YPRIALGVAVMSLLVIATNRLVWRPMYAFAERRTRL 599


>gi|289166596|ref|YP_003456734.1| ABC transporter, permease protein [Legionella longbeachae NSW150]
 gi|288859769|emb|CBJ13750.1| putative ABC transporter, permease protein [Legionella longbeachae
           NSW150]
          Length = 579

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/546 (48%), Positives = 354/546 (64%), Gaps = 26/546 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + + +PI+LD  +LP YA RT LRM  A+  S++FTF     AAK+RR   ++
Sbjct: 42  QMATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQII 101

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +P +DI+QSIP+L FL+ TV  F++L+P  ++G E A+IFAIF +QVWNMTF  YQS+  
Sbjct: 102 IPAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKT 161

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P DL+EV+  FRLS WQ+FW L VPFSM  L+WNMM+SMS  WFFVV SE I V    I
Sbjct: 162 LPHDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNI 221

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
            LPG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E +     
Sbjct: 222 RLPGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAE 281

Query: 281 ADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF-PENFLQLCSNQR 339
             SW++   R +  +                  K+    +GV   HF    +++L  ++ 
Sbjct: 282 YQSWLVDWMRGSRLM------------------KQFAEIIGVFTDHFVNARWMRLNESKA 323

Query: 340 VSYM-------LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           V  +       LD FW   V       AW  + +I+      D+++V  LG  T  RV+ 
Sbjct: 324 VKEIDLKKQRRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVIC 383

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           LII++S+IWIPVG+WIG RP I+ KIQP  Q +AAFPAN+F+PL V  +  +HLN  +W+
Sbjct: 384 LIILSSLIWIPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWV 443

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + LMI GTQWYILFNVIAGASA P +    A +F + GW WW+ + +PGIFP+Y+TGAIT
Sbjct: 444 TPLMILGTQWYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAIT 503

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIV+E  SWG+  LR TGLG YI  ST  G FP++ LG  +MC +VLA N  
Sbjct: 504 AAGGAWNASIVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHL 563

Query: 573 LWHPLY 578
           +W PLY
Sbjct: 564 IWRPLY 569



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 10/205 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +  + I    VG+W          I P   +L + P   F  L ++   + H
Sbjct: 69  TVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSF--LSITVTGFIH 126

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L PN  L     S+  IF  Q W + F         P+D KEVAS F ++ W R+W+ + 
Sbjct: 127 LFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFWK-LE 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P      +   + +   +W   ++SE  S  H ++R  G+G+YIA + ++     V   
Sbjct: 186 VPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAVGYA 245

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
           +L M   +   ++  + PL  +  +
Sbjct: 246 ILTMVIVIFLYDQIFFRPLIAWSEK 270


>gi|83310424|ref|YP_420688.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1]
 gi|82945265|dbj|BAE50129.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1]
          Length = 579

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/580 (47%), Positives = 376/580 (64%), Gaps = 14/580 (2%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++  + PN +DL    ++  ++ +L +G  + T P D+ + + ++LD   LP Y  R+ L
Sbjct: 10  VAPELKPNFWDLAIIPIIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +A++ SL+FT +YA+LAAK   L  VL+PILDI+QSIPILGFL+ TV  F+ L+PG 
Sbjct: 70  RMAAALLASLIFTLIYASLAAKVPALEKVLIPILDILQSIPILGFLSITVTGFIALFPGN 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNMTFS+Y SL  +P DL E S  F LS WQ+FW L +P++MP
Sbjct: 130 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTVPNDLIEASEMFHLSPWQRFWRLELPWAMP 189

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GLVWNMMMS+SGGWFFVVASE I V    I LPG+GSYIALAI E++L AI +AML +L 
Sbjct: 190 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAMLAVLA 249

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFS 307
            I +YDQL+FRP++ W++KF+++   G    +SW+L L ++    R++     ++W+ F+
Sbjct: 250 GIMIYDQLMFRPLVAWADKFKVDSAPGEQQPESWLLTLMQRGRLFRYLARLPSAAWDRFT 309

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L        R    +  H P   + L S     +   +    +   V +G+      +I
Sbjct: 310 FLLRQ-----REETTLFHHAPIRMVTLPSWAERVWDGLLILAALGALVEVGL------FI 358

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                  +V  V+  G  T  RVVVLI +AS+IW+PVG+WIG RP ++  +Q  AQ LAA
Sbjct: 359 HGAIGLWEVWQVLLYGLTTALRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAA 418

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+ V  + ++  N ++W S LMI GTQWYILFNVIAGASA P D K+ A +  
Sbjct: 419 FPANLMFPVAVVLIVHFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLG 478

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++GW  W+  ILP IFP YVTGA+TA GG+WNASIVSE+ SWG   L   GLG+YIA +T
Sbjct: 479 LSGWLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARAT 538

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G FP + LG+ +MC FV+  NRFLW  LY+     LRL
Sbjct: 539 ADGDFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 578


>gi|270158574|ref|ZP_06187231.1| ABC transporter permease domain protein [Legionella longbeachae
           D-4968]
 gi|269990599|gb|EEZ96853.1| ABC transporter permease domain protein [Legionella longbeachae
           D-4968]
          Length = 537

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/544 (48%), Positives = 353/544 (64%), Gaps = 26/544 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + + +PI+LD  +LP YA RT LRM  A+  S++FTF     AAK+RR   +++P
Sbjct: 2   ATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIP 61

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +DI+QSIP+L FL+ TV  F++L+P  ++G E A+IFAIF +QVWNMTF  YQS+  +P
Sbjct: 62  AIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLP 121

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            DL+EV+  FRLS WQ+FW L VPFSM  L+WNMM+SMS  WFFVV SE I V    I L
Sbjct: 122 HDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRL 181

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD 282
           PG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E +       
Sbjct: 182 PGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEYQ 241

Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF-PENFLQLCSNQRVS 341
           SW++   R +  +                  K+    +GV   HF    +++L  ++ V 
Sbjct: 242 SWLVDWMRGSRLM------------------KQFAEIIGVFTDHFVNARWMRLNESKAVK 283

Query: 342 YM-------LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
            +       LD FW   V       AW  + +I+      D+++V  LG  T  RV+ LI
Sbjct: 284 EIDLKKQRRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVICLI 343

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           I++S+IWIPVG+WIG RP I+ KIQP  Q +AAFPAN+F+PL V  +  +HLN  +W++ 
Sbjct: 344 ILSSLIWIPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTP 403

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           LMI GTQWYILFNVIAGASA P +    A +F + GW WW+ + +PGIFP+Y+TGAITA 
Sbjct: 404 LMILGTQWYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAITAA 463

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           GGAWNASIV+E  SWG+  LR TGLG YI  ST  G FP++ LG  +MC +VLA N  +W
Sbjct: 464 GGAWNASIVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHLIW 523

Query: 575 HPLY 578
            PLY
Sbjct: 524 RPLY 527



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 10/205 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+ + +  + I    VG+W          I P   +L + P   F  L ++   + H
Sbjct: 27  TVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSF--LSITVTGFIH 84

Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
           L PN  L     S+  IF  Q W + F         P+D KEVAS F ++ W R+W+ + 
Sbjct: 85  LFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFWK-LE 143

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P      +   + +   +W   ++SE  S  H ++R  G+G+YIA + ++     V   
Sbjct: 144 VPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAVGYA 203

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
           +L M   +   ++  + PL  +  +
Sbjct: 204 ILTMVIVIFLYDQIFFRPLIAWSEK 228


>gi|73542714|ref|YP_297234.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72120127|gb|AAZ62390.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 584

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/572 (47%), Positives = 371/572 (64%), Gaps = 14/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FD     +++ II ++    Q+  VP    + + + LD+  LP Y  RT++RML+A+
Sbjct: 26  PNRFDFALLPIILAIIVMVAFAAQQMNVPFVPGEPMTVHLDIAYLPYYLMRTSIRMLAAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F+  +A LA+K+R    VLVP LDI+QSIP+LGFL+ TV  F+ L+PG +IG E 
Sbjct: 86  AASLVFSLAFAALASKNRTAEKVLVPALDILQSIPVLGFLSITVTGFIALFPGNLIGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYIALAI++Q+L AI +A+L ML  I +YD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGQDIRLPGIGSYIALAIQQQNLAAIGWAILAMLVGILVYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+++FR E  +     +SW+L L R++ ++R +   +              
Sbjct: 266 QLLFRPLVAWADRFRFETLSQDNEPESWLLDLLRRSEWVRALLART----------AALA 315

Query: 317 CRTLG-VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            RTL    R   P         +RV +  +     V+  VA+    + + ++ +   + +
Sbjct: 316 ERTLAWGARRQAPAT--AEPDPRRVQWR-ERAGNAVILLVALAALSRVMYFVHSEVGWLE 372

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V +V+WLG +TM RV+VLI +A++IW+P+GI IG  P ++   QP AQ LAAFPAN+ FP
Sbjct: 373 VGHVLWLGTLTMVRVIVLIALAAVIWVPIGIRIGLNPSVARIAQPVAQFLAAFPANLMFP 432

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  + LNP +WLS L+IFGTQWYILFNV+AGAS  P + K  A +F + GW  W+
Sbjct: 433 LVVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLAARNFGLRGWLLWK 492

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ++P +FP  +TG +TA GG+WNASIV+E  +WG   L  TGLG+YIAE+T +G FP +
Sbjct: 493 RFLIPAVFPSLLTGLVTAAGGSWNASIVAEYVTWGDRTLVATGLGSYIAETTARGDFPRI 552

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 553 ALGIGVMALFVVGFNRLLWNRLYQLAQERTRL 584


>gi|83749465|ref|ZP_00946456.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207722076|ref|YP_002252514.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207744869|ref|YP_002261261.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83723862|gb|EAP71049.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206587250|emb|CAQ17834.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206596279|emb|CAQ63206.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 586

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/576 (48%), Positives = 372/576 (64%), Gaps = 20/576 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + + LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYIPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA-----WQSIGYIVNHF 371
            RTL        E      SN   S++    W   V  V I +A     W  + ++ +  
Sbjct: 316 ERTLA----WGAERTRPKASNSN-SFLPRFPWSGRVADVVIMLAALAALWHILQFVRSEV 370

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + +V  V+WLG +TM RV++LI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN
Sbjct: 371 GWAEVGRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPAN 430

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FPLVV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS  P + +  A +F + GW
Sbjct: 431 LMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGW 490

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             W+  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG 
Sbjct: 491 LMWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGD 550

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           FP + LG+ +M  FV+  NR LW+ LYL      RL
Sbjct: 551 FPRIALGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586


>gi|300702458|ref|YP_003744058.1| binding-protein-dependent transporter [Ralstonia solanacearum
           CFBP2957]
 gi|299070119|emb|CBJ41408.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum CFBP2957]
          Length = 586

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/576 (47%), Positives = 373/576 (64%), Gaps = 20/576 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + + LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA-----WQSIGYIVNHF 371
            RTL      +     +  ++   S++    W   V  V I +A     W  + ++ +  
Sbjct: 316 ERTLA-----WGAERTRPKASGSNSFLPRFPWSGRVADVIIMLAALAALWHILQFVRSEV 370

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + +V  V+WLG +TM RV++LI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN
Sbjct: 371 GWAEVGRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPAN 430

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FPLVV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS  P + +  A +F + GW
Sbjct: 431 LMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGW 490

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             W+  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG 
Sbjct: 491 LMWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGD 550

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           FP + LG+ +M  FV+  NR LW+ LYL      RL
Sbjct: 551 FPRIALGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586


>gi|113869274|ref|YP_727763.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528050|emb|CAJ94395.1| ABC-type transporter, duplicated permease domains: TauT family
           [Ralstonia eutropha H16]
          Length = 583

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/585 (48%), Positives = 371/585 (63%), Gaps = 20/585 (3%)

Query: 8   PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           P F S+  R  PN FDL    +++ +I ++    Q+   P      + + LDV  LP Y 
Sbjct: 14  PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFTAQQMNAPFQPDQQLAVHLDVAYLPYYL 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            RT++RML+A+  SLLF+  +A LA+KSR    VLVP LDI+QSIP+LGFL+ TV  F+ 
Sbjct: 74  MRTSIRMLAALAASLLFSLAFAALASKSRTAEKVLVPALDILQSIPVLGFLSITVTGFIA 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+PG + G E AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L V
Sbjct: 134 LFPGNIAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLMEAAAMFRLSPWQRFWRLEV 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PF+MPGL+WNMMMSMSGGWFFVVASE I V    I LPGIGSYIALAI++QDL AI +A+
Sbjct: 194 PFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L ML  I LYDQLLFRP++ W+++FR E         SW+L L R++ ++  +       
Sbjct: 254 LAMLAGILLYDQLLFRPLVAWADRFRFETQAQDKLPQSWLLDLLRRSAWVGAV------- 306

Query: 306 FSPLSNNVKKLCRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
              L+       RTL  G  R   P        N R +         V+  VA+  A   
Sbjct: 307 ---LAQTAALAGRTLAWGARRGQAPAQ----PDNPRRALWFGRVRDAVIVLVALA-ALLR 358

Query: 364 IGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +GY V+    + +V +V+WLG ITM RVVVLI +A+++W+P+GI IG  P ++   QP A
Sbjct: 359 VGYFVHSEVGWAEVGHVLWLGTITMVRVVVLIALAALVWVPIGIRIGLSPELARIAQPIA 418

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q LAAFPAN+ FPL V  +  + LNP +WLS L+IFGTQWYILFNV+AGAS  P + K  
Sbjct: 419 QFLAAFPANLMFPLAVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLA 478

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +F + GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  +WG   +  TGLG+Y
Sbjct: 479 TRNFGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSY 538

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           IAE+T +G FP + LG+++M  FV+  NR LW+ LY       RL
Sbjct: 539 IAETTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 583


>gi|317407655|gb|EFV87594.1| ABC transport system permease [Achromobacter xylosoxidans C54]
          Length = 577

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/563 (45%), Positives = 364/563 (64%), Gaps = 13/563 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N +D     LV+G++  + +G  + + P  + + +PI+LD   LP Y  RT LRM +A+ 
Sbjct: 20  NRWDWALLPLVLGVLAAMAYGASQMSRPFAVGEELPISLDPIYLPYYLLRTILRMFTALA 79

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SLLF+FV+A +AAK R     ++P+LDI+QS+PILGF    +  F+ L+PG ++G E A
Sbjct: 80  FSLLFSFVFAAIAAKFRTAEKAMIPMLDILQSVPILGFQAIAIAPFIALFPGNLLGVECA 139

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW L +P++ PGL+WNMM
Sbjct: 140 AIFAIFTSQAWNMAFSLYQSMRTVPAELNEAARVFRLSGWQRFWRLELPYATPGLLWNMM 199

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFF+VA+E I V    I LPGIGSYIA+AI  ++  AI +A+  M+  I LYDQ
Sbjct: 200 MSMSGGWFFLVAAEAISVAGQDIKLPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQ 259

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L FRP++ W++KFR E +       SW+L   R++ +++ +    W           ++ 
Sbjct: 260 LFFRPLLAWADKFRFEESQADVAQQSWLLDWTRRSRWMQALSNMFW----------ARMR 309

Query: 318 RTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           R LG   F  P +   + +  +         W  ++   A+   ++ + ++     + +V
Sbjct: 310 RALGW--FSVPYDGTSIRARAKAPDPRWTRIWDSLLAAAALLATYKLVVFVHQEVGWGEV 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L+V+ LG IT+ RV+VLI +AS+IW+P+ +WIG RP  S ++Q  AQ LAAFP N+ FP 
Sbjct: 368 LHVVGLGGITLARVMVLIGLASLIWVPIAVWIGLRPRYSQRVQAVAQFLAAFPVNLLFPA 427

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  +  + LNPN+WLS L+IFGTQWYILFNV+AGAS  PN+ +  A +  + GW  WR 
Sbjct: 428 VVFVMVAFKLNPNIWLSPLIIFGTQWYILFNVVAGASTIPNELRLAAGNLGLKGWLLWRR 487

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP +FP ++TGAITA GG+WNASIV+E  SWG+  L   GLG+YI + TE+G F  + 
Sbjct: 488 VYLPAVFPSFITGAITASGGSWNASIVAEYVSWGNTSLVADGLGSYIKQMTEQGDFHRIA 547

Query: 557 LGVLIMCCFVLALNRFLWHPLYL 579
           LG+ +M  FV+ LNRF W  LYL
Sbjct: 548 LGIGVMSIFVMLLNRFFWRKLYL 570



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 20/168 (11%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476
           I PF   +A FP N+   L V C + +            IF +Q W + F++       P
Sbjct: 122 IAPF---IALFPGNL---LGVECAAIFA-----------IFTSQAWNMAFSLYQSMRTVP 164

Query: 477 NDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
            +  E A  F ++GW R+WR + LP   P  +   + +  G W   + +E  S     ++
Sbjct: 165 AELNEAARVFRLSGWQRFWR-LELPYATPGLLWNMMMSMSGGWFFLVAAEAISVAGQDIK 223

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             G+G+YIA + +  +   +   +  M   +L  ++  + PL  +  +
Sbjct: 224 LPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQLFFRPLLAWADK 271


>gi|160872910|ref|ZP_02063042.1| ABC transporter, permease protein [Rickettsiella grylli]
 gi|159121709|gb|EDP47047.1| ABC transporter, permease protein [Rickettsiella grylli]
          Length = 577

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/586 (44%), Positives = 382/586 (65%), Gaps = 14/586 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +YN      S +I PN +D +A ++V+G++   +   ++ T P  +     +TLD   LP
Sbjct: 4   IYNRFSFRSSFKILPNAWDFVALIMVLGMLAAFVWAGKQITSPYHVGQPFALTLDPLQLP 63

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +YA  T LR+ +AM  SLLFTF   TLAAK++R   +++P +DI+QS+P++G L+ T+V 
Sbjct: 64  KYALFTVLRLFTAMAFSLLFTFTVGTLAAKNKRAARIIIPCIDILQSVPVIGLLSITIVG 123

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+ L+ G  +G E AAIFA+FT+QVWN+T S YQSL ++P +L+E +  F LS WQ+FW 
Sbjct: 124 FITLFQGSRLGPEAAAIFAVFTAQVWNITLSFYQSLRSVPTELKEAADIFHLSSWQRFWR 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L VPFSMPGL+WN+MMSMS  W F++ASE I V +  I LPGIGSY+ LAI    +  ++
Sbjct: 184 LDVPFSMPGLLWNIMMSMSASWIFLIASESISVNNQTIILPGIGSYLGLAINRASISGVI 243

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           Y +LTM  VI LYDQLLFRP++ WS KF  E+ +  Y + SW+  L ++T  L+++G   
Sbjct: 244 YTILTMFVVILLYDQLLFRPLLNWSKKFTFEQVSQEYVSRSWLTSLLQQTYILKYLG--- 300

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS-YMLDIFWFCVVCGVAIGIAW 361
             FF  L +          ++   F +   ++ + +  S   +D  W+ +         W
Sbjct: 301 -RFFGKLGDT---------IVNISFFKTKKEVSAKKSGSNKFIDFIWYSMTFVFVSLSLW 350

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+ + +  ++++V +LGCIT  R++ +I+IASIIWIP+G++IG    I+  IQP 
Sbjct: 351 LLLQFILKNLSLHELIHVFFLGCITALRIISIILIASIIWIPIGVFIGLNRRIAEWIQPI 410

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ  AAFPANV FP+VV  +  YHLN  +W + L++ GTQWYILFNVIAG +A P D KE
Sbjct: 411 AQFFAAFPANVLFPIVVILILKYHLNFEIWSTPLLLLGTQWYILFNVIAGTAALPEDLKE 470

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           V+S+F + GW+WWR +ILPGIFP+++TG ITA GG WN +I++E+ +WG I L +TGLGA
Sbjct: 471 VSSNFGVKGWQWWRRLILPGIFPHWITGTITAIGGGWNLTILTEIINWGSITLVSTGLGA 530

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           YIA+S + G FP + LG+ +M  FVL +N  +W PLY       RL
Sbjct: 531 YIAKSADAGDFPRIALGMAMMSLFVLVMNHLVWRPLYNLSQSRYRL 576


>gi|23013971|ref|ZP_00053815.1| COG4986: ABC-type anion transport system, duplicated permease
           component [Magnetospirillum magnetotacticum MS-1]
          Length = 582

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/581 (48%), Positives = 373/581 (64%), Gaps = 16/581 (2%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++  + PN +DL    ++  ++ +L +G  + T P D+ + + ++LD   LP Y  R+ L
Sbjct: 13  VAPELKPNFWDLAIIPMIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 72

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +A++ SL FT VYATLAAK   L  VL+P+LDI+QSIPILGFL+ TV  F+ L+PG 
Sbjct: 73  RMAAALLASLAFTLVYATLAAKVPALEKVLIPVLDILQSIPILGFLSITVTGFIALFPGN 132

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNMTFS+Y SL     DL E S  F LS WQ+FW L +P++MP
Sbjct: 133 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTERYDLIEASEMFHLSPWQRFWRLELPWAMP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GLVWNMMMS+SGGWFFVVASE I V    I LPG+GSYIALAI E++L AI +A+L +L 
Sbjct: 193 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAVLAVLA 252

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFS 307
            I +YDQL+FRP++ W++KF+++   G    +SW+L L ++    R +     + W+ F+
Sbjct: 253 GIMIYDQLMFRPLVAWADKFKVDSLPGEQQPESWLLTLMQRGRMFRTLARLPSAMWDRFT 312

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            L      L R      FH  +  + + +  R V    D    C   G  + +A     +
Sbjct: 313 FL------LRRKDRAQLFH--QAPIHMVTLPRWVERTWDGLLICGAVGALVEVAL----F 360

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I       +V  V+  G  T FRVVVLI +AS+IW+PVG+WIG RP ++  +Q  AQ LA
Sbjct: 361 IHGSIGLWEVGQVLLYGFATAFRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLA 420

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+ FP+ V  +  +  N ++W S LMI GTQWYILFNVIAGASA P D K+ A + 
Sbjct: 421 AFPANLMFPVAVVLIVRFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNL 480

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++GW  W+  ILP IFP YVTGA+TA GG+WNASIVSE+ SWG   L   GLG+YIA +
Sbjct: 481 GLSGWLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARA 540

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           T  G FP + LG+ +MC FV+  NRFLW  LY+     LRL
Sbjct: 541 TADGDFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 581


>gi|241664824|ref|YP_002983184.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|240866851|gb|ACS64512.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 594

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/572 (47%), Positives = 374/572 (65%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSPLSNNVKK 315
           QLLFRP+I W+++FR +  +      SW+L L R++ +++  +  ++      LS   ++
Sbjct: 274 QLLFRPLIAWADRFRFDTMSSEREPQSWLLDLLRRSEWVKALLERTAALAEHTLSWGAER 333

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
              T        P    +   + RV+ ++ I     +  VA       + ++ +   + +
Sbjct: 334 TRPTAAGSNGFLP----RFPWSHRVADVVII--LAALMAVA-----HVLQFVRSEVGWAE 382

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ FP
Sbjct: 383 VGHVFWLGFLTMLRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFP 442

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W+
Sbjct: 443 LAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWK 502

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP +
Sbjct: 503 RFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRI 562

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 563 ALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|187930633|ref|YP_001901120.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|187727523|gb|ACD28688.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
          Length = 594

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/573 (47%), Positives = 370/573 (64%), Gaps = 14/573 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323

Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            RTL  G  R   P          R  +   +    ++    + +A   + ++ +   + 
Sbjct: 324 ERTLSWGAERTR-PTAAGGNGFLPRFPWSHRVADVIIILAALVAVA-HVLQFVRSEVGWA 381

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +V +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ F
Sbjct: 382 EVGHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMF 441

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W
Sbjct: 442 PLAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLW 501

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP 
Sbjct: 502 KRFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPR 561

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 562 IALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|309780369|ref|ZP_07675120.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308921072|gb|EFP66718.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 594

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/573 (47%), Positives = 371/573 (64%), Gaps = 14/573 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323

Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            RTL  G  R   P          R  +   +    ++    + +A   + ++ +   + 
Sbjct: 324 ERTLSWGAERTR-PTAAGGNGFLPRFPWSHRVADVIIILAALVAVA-HVLQFVRSEVGWA 381

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +V +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ F
Sbjct: 382 EVGHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMF 441

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W
Sbjct: 442 PLAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLW 501

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +  ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP 
Sbjct: 502 KRFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPR 561

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + LG+++M  FV+  NR LW+ LY       RL
Sbjct: 562 IALGIVVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|152980896|ref|YP_001353349.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280973|gb|ABR89383.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 577

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/578 (46%), Positives = 376/578 (65%), Gaps = 20/578 (3%)

Query: 10  FISRR-------IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           F+ RR       I PN +D     LV+ ++  +  G  + T P  + ++ PI+LD  +LP
Sbjct: 5   FVPRRTDRSLLAISPNRWDWALLPLVLAVLVAVGFGAMQMTRPFVVGEVTPISLDPANLP 64

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            Y  RT LRM  A+  +LLF+FV+A +AAK R    V++P LDI+QS+PILGF    +  
Sbjct: 65  YYLLRTILRMFIALGCALLFSFVFAAIAAKYRAAEKVMIPTLDILQSVPILGFQAIAIAP 124

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +PG ++G E AAIFAIF+SQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW 
Sbjct: 125 FIAFFPGSLLGVECAAIFAIFSSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWR 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P++MPGL+WNMMMSMSGGWFF+VA+E I V +  I LPGIG+YIA+AI+ +DL AIL
Sbjct: 185 LELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVANQDIKLPGIGAYIAVAIEAKDLHAIL 244

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           +A+  ML  I LYDQL FRP++ W++KFR E + G     SW+L   R++ ++R      
Sbjct: 245 WAIGAMLAGIVLYDQLFFRPLLAWADKFRFEESQGETEQRSWLLNWGRRSRWMRAGTDRM 304

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
           W            L  TLG   F    +     ++ RV + + +  + VV  +A G+A  
Sbjct: 305 WAM----------LRSTLGW--FSVSYDGTAPRASARVIHPMWMRVWNVVLLLAAGLAVY 352

Query: 363 SIG-YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            +G ++ +   + +V +V+WLG IT+ RV++LI +AS++W+P+ +WIG RP  S ++Q  
Sbjct: 353 RLGIFVHSEVGWAEVGHVLWLGVITLTRVLLLIALASLVWVPIAVWIGLRPKYSQRVQGL 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ LAAFP N+ FPLVV  +    LNPN+WLS LM+FGTQWYILFNV+AGAS  PN+ + 
Sbjct: 413 AQFLAAFPVNLMFPLVVYLLLTMQLNPNIWLSPLMVFGTQWYILFNVVAGASTIPNELRL 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            + +  + GW  W+ + LP +FP YVTGAITA GG+WNASIV+E  +WG   L   GLG+
Sbjct: 473 ASDNLGLKGWLKWKRVYLPAVFPSYVTGAITASGGSWNASIVAEYVTWGKTTLIADGLGS 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           YI + T+ G F  + LG+ +MC FV+ LNRF W  LYL
Sbjct: 533 YIKQMTDAGDFHRIALGIGVMCIFVMLLNRFFWRKLYL 570



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%)

Query: 423 QLLAAFPANVFFP---LVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478
           Q +A  P   FFP   L V C + +            IF +Q W + F++       P++
Sbjct: 118 QAIAIAPFIAFFPGSLLGVECAAIFA-----------IFSSQAWNMAFSLYQSIRTVPSE 166

Query: 479 FKEVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             E A  F ++GW R+WR + LP   P  +   + +  G W   + +E  S  +  ++  
Sbjct: 167 LNEAARVFRLSGWQRFWR-LELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVANQDIKLP 225

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G+GAYIA + E      ++  +  M   ++  ++  + PL  +  +
Sbjct: 226 GIGAYIAVAIEAKDLHAILWAIGAMLAGIVLYDQLFFRPLLAWADK 271


>gi|94312116|ref|YP_585326.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355968|gb|ABF10057.1| ABC-type transporter, permease component [Cupriavidus metallidurans
           CH34]
          Length = 581

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 269/572 (47%), Positives = 369/572 (64%), Gaps = 13/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FD     +++ +I I+    ++  VP    D + + LDV SLP Y  RT++RML+A+
Sbjct: 22  PNRFDFALLPIILAVIVIVAFAAKQMVVPYQPGDALSVQLDVASLPYYLMRTSIRMLAAL 81

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 82  AASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 141

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L VP++MPGL+WNM
Sbjct: 142 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPYAMPGLLWNM 201

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYIALAI++Q+L AI +A++ ML  I +YD
Sbjct: 202 MMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQNLPAIGWAIVAMLVGILIYD 261

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           Q LFRP++ W+++FR E         SW+L L R++ ++  +          L       
Sbjct: 262 QFLFRPLVAWADRFRFETLAQDTMPQSWLLDLLRRSAWVHAL----------LKWTASLG 311

Query: 317 CRTLGVIRFHFPENFLQL-CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            RTL     H   N + L  +  R S  L+     V+  +A+   ++ + ++ +   + +
Sbjct: 312 GRTLAWSARH--RNMVVLPAAPARWSPWLERLRDTVIIVIALAALYRVVHFVHSEVGWGE 369

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             +V+WLG +TM RV+VLI +A++IW+P+GI IG  P ++   QP AQ +AAFPAN+ FP
Sbjct: 370 AAHVLWLGVLTMTRVIVLIALAALIWVPIGIRIGLNPSVARIAQPIAQFMAAFPANLMFP 429

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V  +  + LNP +WLS LMIFGTQWYILFNV+AGAS  P + +  A +F + GW  WR
Sbjct: 430 LAVMAIVRFGLNPEIWLSPLMIFGTQWYILFNVVAGASGIPTELRLAARNFGLKGWLMWR 489

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ++P +FP  +TG +TA GG+WNASIVSE  +WG   L  TGLG+YIAE T +G FP +
Sbjct: 490 RFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTLVATGLGSYIAEMTARGDFPRI 549

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 550 ALGIGVMALFVVGFNRLLWNRLYDLAQLRTRL 581


>gi|194290861|ref|YP_002006768.1| binding-protein-dependent transporter inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224696|emb|CAQ70707.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 584

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/584 (47%), Positives = 374/584 (64%), Gaps = 17/584 (2%)

Query: 8   PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           P F S+  R  PN FDL    +++ +I ++    Q+  VP      + + LDV  LP Y 
Sbjct: 14  PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFAAQQMNVPFRPDQPLAVHLDVAYLPYYL 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            RT++RML+A+  SLLF+  +A LA+KSR    VLVP LDI+QSIP+LGFL+ TV  F+ 
Sbjct: 74  MRTSVRMLAALAASLLFSLAFAALASKSRSAEKVLVPALDILQSIPVLGFLSITVTGFIA 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+PG + G E AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L V
Sbjct: 134 LFPGNLAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLLEAAAMFRLSPWQRFWRLEV 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P++MPGL+WNMMMSMSGGWFFVVASE I V    I LPGIGSYIALAI++QDL AI +A+
Sbjct: 194 PYAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           + ML  I LYDQLLFRP++ W+++FR E         SW+L L R++ +   +   +   
Sbjct: 254 VAMLAGILLYDQLLFRPLVAWADRFRFETLAQDKLPQSWLLDLLRRSAWAGALLAQAAAL 313

Query: 306 FSPLSNNVKKLCRTLG-VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            S          RTL    R   P     +  + R +  L       +  VA+  A   +
Sbjct: 314 GS----------RTLAWGARGRAPAPARPI--DPRRARWLGRARDTAIVLVALA-ALLRV 360

Query: 365 GYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           GY V+    + +V++V+WLG +TM RV+VLI +A+++W+P+GI IG  P ++   QP AQ
Sbjct: 361 GYFVHSEVGWSEVVHVLWLGTLTMVRVIVLIALAALVWVPIGIRIGLNPDLARIAQPVAQ 420

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            LAAFPAN+ FPL V  ++ + LNP +WLS L+IFGTQWYILFNVIAGAS  P + +  A
Sbjct: 421 FLAAFPANLMFPLAVMLIARFGLNPEIWLSPLLIFGTQWYILFNVIAGASGIPTELRLAA 480

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +F + GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  +WG   +  TGLG+YI
Sbjct: 481 RNFGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYI 540

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AE+T +G FP + LG+++M  FV+  NR LW+ LY       RL
Sbjct: 541 AETTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 584


>gi|296137104|ref|YP_003644346.1| binding-protein-dependent transport systems inner membrane
           component [Thiomonas intermedia K12]
 gi|294341397|emb|CAZ89814.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
 gi|295797226|gb|ADG32016.1| binding-protein-dependent transport systems inner membrane
           component [Thiomonas intermedia K12]
          Length = 570

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/572 (44%), Positives = 367/572 (64%), Gaps = 14/572 (2%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN  DL+A  LVIG++ I+ H  ++  VP  + + V ++L    LP+YA  T LRML+A
Sbjct: 12  LPNRRDLIALPLVIGMLLIIGHASRQMAVPFHLGETVALSLKPADLPEYALYTVLRMLAA 71

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +  S +FT +YA +AA +R    ++VP+LD++QS+PILG+L+ TV  F+ L+PG ++G +
Sbjct: 72  LAASTVFTLIYAWIAANNRYAEKIMVPLLDVLQSVPILGYLSITVTGFIALFPGSMLGLQ 131

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A IFA+FTSQ WNMTFS+YQSL  +PRDL E +  +RL+ WQ+FW L +P++ PGL+WN
Sbjct: 132 FAVIFAVFTSQAWNMTFSLYQSLKTVPRDLTEAATLYRLNAWQRFWKLELPYAAPGLLWN 191

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSGGWFFVVA+E + V    + +PGIGSYIA AI  ++L AI +A+L M  VI  Y
Sbjct: 192 AMMSMSGGWFFVVAAEALTVAGQQVSVPGIGSYIAAAIAAKNLGAIGWAILAMALVILSY 251

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           D LLFRP++ W++KFRL+ T  +    S VL   R+T   + +       +       + 
Sbjct: 252 DFLLFRPIVAWADKFRLDNTVSVDAPRSVVLDFLRRTRLTQRLARLPAVLW-------EM 304

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R L  +  H            RV +++ +  F +   VA+ +       +   F +  
Sbjct: 305 SVRLLPAVPLHKSPQRAPSVWGDRV-FVVSMVLFTLGLIVALFLV------LPRDFGWLQ 357

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V +V+ LG  T  +V VL+ I+++IW+PVGIW+G RP  ++  QP AQ LAAFPAN+ FP
Sbjct: 358 VGHVMLLGAFTALKVFVLVAISALIWVPVGIWVGLRPRWAAVAQPVAQFLAAFPANLLFP 417

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  + ++HLN N++ + LMI G+QWY+LF+VI  ASA P+D +E   +  + GW  WR
Sbjct: 418 LVVVAIVHWHLNVNVFTAPLMILGSQWYVLFSVIGAASALPSDLREAGRNLGLRGWLLWR 477

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP +FP +VTGA+TA GGAWNASIV+EV SWG   L  TGLGAYI E+T++G   +V
Sbjct: 478 KLYLPAVFPGFVTGALTASGGAWNASIVAEVVSWGSHTLVATGLGAYITEATQQGQTLKV 537

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV +M  +V+A+NR +WH LY      +RL
Sbjct: 538 GLGVGVMALYVIAINRLVWHRLYKIAATRVRL 569


>gi|255019932|ref|ZP_05292006.1| binding-protein-dependent transport systems inner membrane
           component [Acidithiobacillus caldus ATCC 51756]
 gi|254970591|gb|EET28079.1| binding-protein-dependent transport systems inner membrane
           component [Acidithiobacillus caldus ATCC 51756]
          Length = 572

 Score =  485 bits (1248), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/565 (45%), Positives = 365/565 (64%), Gaps = 21/565 (3%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV+G   +L H  ++ +VP  + + +PI+    +L   A  TTLRML+A+  SL+FT  
Sbjct: 25  LLVLGFF-VLAHATRQMSVPFTLGEALPISTRPSALVDDALYTTLRMLAAVAASLIFTIF 83

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           Y  LAAK+R  G +L+P+LDI+QS+PILG+L+ TV  F+ L+PG +IG +LA +FA+FTS
Sbjct: 84  YGLLAAKNRYAGKILIPLLDILQSVPILGYLSITVTGFIALFPGSLIGVQLAVVFAVFTS 143

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           QVWNMTF+ YQ+L  +P+DL+E +R +RL+ WQ+F+ L +PF++P L+WN MMSMSGGWF
Sbjct: 144 QVWNMTFAFYQALITLPKDLDEAARLYRLNAWQRFFRLELPFAVPPLLWNTMMSMSGGWF 203

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           FVVA+E I V    + +PGIGSYIA+AI +++L A+ +A+L ML VI LYD LLFRP++ 
Sbjct: 204 FVVAAEAITVAGHEVMVPGIGSYIAMAIAQKNLAAVFWAILAMLLVIGLYDFLLFRPVVA 263

Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFSPLSNNVKKLCRTLGV 322
           W++KF+LE    +    SWVL   R++   + +       W F            R L  
Sbjct: 264 WADKFKLETGADLQRPRSWVLDFLRRSRLAQAVAMVPAELWEFS----------LRILPP 313

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            R H+      +   +R  +   +F   V   +  G  WQ    +   F    +++V++L
Sbjct: 314 GRPHW------VGEEKRRPWADVLFLLLVGGVLVYGF-WQLYATLARSFDLTTLVHVLFL 366

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G +T  RV+VL+ ++ +IW+PVGI +G RP +S +IQ   Q LAAFPAN+ FP+VV  + 
Sbjct: 367 GLVTGLRVMVLVALSLLIWVPVGILVGLRPGLSGRIQAAIQFLAAFPANLLFPMVVLAIL 426

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           ++HLN N+W+S LMI G+QWY+LFNVI  A+A P D KE A +  + GW  W+ ++LPG 
Sbjct: 427 HWHLNVNIWVSPLMILGSQWYVLFNVIGAAAALPADLKEAARNLGLRGWLLWKRLLLPGT 486

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  VTG ITA GGAWNASIV+EV SWG+  L  TGLGAYI  +T  G+   V LG+ +M
Sbjct: 487 FPGTVTGGITASGGAWNASIVAEVVSWGNHTLVATGLGAYITLATAAGNLNAVALGIGVM 546

Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587
             +V+ +NR  W  LY    R LRL
Sbjct: 547 SFYVVVVNRLFWRRLYDLAARRLRL 571


>gi|134094843|ref|YP_001099918.1| putative transmembrane ABC transporter protein [Herminiimonas
           arsenicoxydans]
 gi|133738746|emb|CAL61793.1| putative ABC-type transport system, permease component
           [Herminiimonas arsenicoxydans]
          Length = 577

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/565 (45%), Positives = 362/565 (64%), Gaps = 11/565 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I PN +D     LV+ ++  +  G  + + P  + +  PI+LD   LP Y  RT LRM  
Sbjct: 17  ISPNRWDWALLPLVLIVLLAVAFGAAQMSRPFMVGEATPISLDPAYLPYYLLRTILRMFM 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+  SLLF+FV+A +AAK R    +++P+LDI+QS+PILGF    +  F+  +PG ++G 
Sbjct: 77  ALGFSLLFSFVFAAIAAKYRAAEKIMIPMLDILQSVPILGFQAIAIAPFIAFFPGNLLGV 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW + +P++MPGL+W
Sbjct: 137 ECAAIFAIFTSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRMELPYAMPGLLW 196

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFF+VA+E I V    I LPGIG+YIA+AI+ +DL AIL+A+  ML  I L
Sbjct: 197 NMMMSMSGGWFFLVAAEAISVAGQDIKLPGIGAYIAVAIEARDLHAILWAIGAMLAGIVL 256

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQL FRP++ W++KFR E + G     SW+L   R++ ++R      W+          
Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGDTAQRSWLLDWGRRSRWMRAFSARVWSL--------- 307

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L RTLG           Q  S + +       W  +V   ++   ++   +I +     
Sbjct: 308 -LRRTLGWFSLRHDGTSPQ-TSARTIHPWWPRIWDGLVLFASLLAVFRLALFIHSDIGLT 365

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L+V+ LG IT+ RV++LI +AS+IW+P+ +WIG RP  S  +Q  AQ LAAFP N+ F
Sbjct: 366 EILHVVKLGFITLLRVLLLIGLASLIWVPIAVWIGLRPKYSQCVQGAAQFLAAFPVNLMF 425

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLVV  +    LNP++WLS LM+FGTQWYILFNV+AGA+  PN+ +  + +  + GW  W
Sbjct: 426 PLVVYLLVSMQLNPDIWLSPLMVFGTQWYILFNVVAGAATIPNELRLASDNLGLKGWLKW 485

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + + LP +FP Y+TGAITA GG+WNASIV+E  +WG   L   GLG+YI + T+ G F  
Sbjct: 486 KRVYLPAVFPSYITGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDIGDFHR 545

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYL 579
           + LG+ +MC FV+ LNRF W  LYL
Sbjct: 546 IGLGIGVMCIFVMLLNRFFWRKLYL 570



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 17/164 (10%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFK 480
           A  +A FP N+   L V C + +            IF +Q W + F++       P++  
Sbjct: 123 APFIAFFPGNL---LGVECAAIFA-----------IFTSQAWNMAFSLYQSIRTVPSELN 168

Query: 481 EVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           E A  F ++GW R+WR + LP   P  +   + +  G W   + +E  S     ++  G+
Sbjct: 169 EAARVFRLSGWQRFWR-MELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVAGQDIKLPGI 227

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           GAYIA + E      ++  +  M   ++  ++  + PL  +  +
Sbjct: 228 GAYIAVAIEARDLHAILWAIGAMLAGIVLYDQLFFRPLLAWADK 271


>gi|258542332|ref|YP_003187765.1| anion transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256633410|dbj|BAH99385.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636469|dbj|BAI02438.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639522|dbj|BAI05484.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642578|dbj|BAI08533.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645633|dbj|BAI11581.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648686|dbj|BAI14627.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651739|dbj|BAI17673.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654730|dbj|BAI20657.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 582

 Score =  468 bits (1205), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/536 (49%), Positives = 358/536 (66%), Gaps = 12/536 (2%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           +PI LD+  LP YA RTT+RM +A+  SL+FTFVYATLAAKSRR G +LVP+LD++QS+P
Sbjct: 58  MPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQILVPLLDVLQSVP 117

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           ILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM   MYQ L ++P +LEE +R 
Sbjct: 118 ILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGLRSVPPELEETARC 177

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T I LPGIGSY+ +
Sbjct: 178 FGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGSTDITLPGIGSYVGM 237

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           AI +Q++ A+  A++ M+ VI +YDQ+LFRP+  W+ +FRLE        + W L L R+
Sbjct: 238 AIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNATQVVEPWFLRLVRR 297

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T  LR  G           N +  + R +  +      + +++ +++      D  W+  
Sbjct: 298 TRLLRMCG-----------NALLSVGRRISYLPLGSRPDTMRVDADESTGGP-DWLWWGF 345

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  V +G +WQ   Y   H+T   + YV  LG IT+ RVV ++++AS+IW+PVGIW G  
Sbjct: 346 LLLVCLGASWQVWDYAHTHYTLGQIAYVFGLGGITLVRVVSMLVLASLIWVPVGIWCGLD 405

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  + + Q  AQ  AAFPAN+FFP+ V  + ++ L P++WL+ LMI G QWYILFNVIAG
Sbjct: 406 PTRARRAQILAQYGAAFPANLFFPVFVVVIVHFRLTPDIWLTPLMILGAQWYILFNVIAG 465

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           AS+FP++  EV  +  + GW WWR IILPGI PYY+ G + A GGAWNA+I SEVA WG 
Sbjct: 466 ASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAWNAAIASEVAQWGE 525

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             L   GLGAY+A+ST+ G+   V LG ++MC FV+  N  +W PL  +  R L+L
Sbjct: 526 TTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCVFVMFTNALVWRPLSDFVARRLKL 581


>gi|329113495|ref|ZP_08242276.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
 gi|326697320|gb|EGE48980.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
          Length = 582

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/536 (48%), Positives = 357/536 (66%), Gaps = 12/536 (2%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           +PI LD+  LP YA RTT+RM +A+  SL+FTFVYATLAAKSRR G +L+P+LD++QS+P
Sbjct: 58  MPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQILIPLLDVLQSVP 117

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           ILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM   MYQ L ++P +LEE +R 
Sbjct: 118 ILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGLRSVPPELEETARC 177

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T + LPGIGSY+ +
Sbjct: 178 FGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGSTDVTLPGIGSYVGM 237

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           AI +Q++ A+  A++ M+ VI +YDQ+LFRP+  W+ +FRLE        + W L L R+
Sbjct: 238 AIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNTAQVVEPWFLRLVRR 297

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T  LR  G           N +  + R +  +      + +   ++   S   D  W+  
Sbjct: 298 TRLLRMGG-----------NALLSVGRRISYLPLGARPDTVHATADDN-SDGADWLWWGF 345

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  V +  +WQ   Y   H+T+  + YV  LG IT+ RVV ++++AS+IW+PVGIW G  
Sbjct: 346 LLIVCLAASWQVWAYAHTHYTFGQIAYVFGLGGITLLRVVSMLVLASLIWVPVGIWCGLD 405

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  + + Q  AQ  AAFPAN+FFP+ V  + ++HL P++WL+ LMI G QWYILFNVIAG
Sbjct: 406 PMRARRAQILAQYGAAFPANLFFPVFVVVIVHFHLTPDIWLTPLMILGAQWYILFNVIAG 465

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           AS+FP++  EV  +  + GW WWR IILPGI PYY+ G + A GGAWNA+I SEVA WG 
Sbjct: 466 ASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAWNAAIASEVAQWGE 525

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             L   GLGAY+A+ST+ G+   V LG ++MC FV+  N  +W PL  +  R L+L
Sbjct: 526 TTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCIFVMFTNALVWRPLSDFVARRLKL 581


>gi|86605760|ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86554302|gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus
           sp. JA-3-3Ab]
          Length = 575

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/529 (45%), Positives = 333/529 (62%), Gaps = 12/529 (2%)

Query: 51  IVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
           +VP I LD  +LP YA+R+TLRM  A+  S LFT +Y  +AAKSR    +L+P+LDI+QS
Sbjct: 49  VVPHIDLDPRNLPYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDILQS 108

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P+LGFL+ TV  F+ L+PG ++G E A+IFAIFTSQVWNMTFS YQSL  +P++L E  
Sbjct: 109 VPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAV 168

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
             +RLSGWQ+F  L VP +M GL+WN MMS  GGWFFV ASE I V +    LPG+GSY+
Sbjct: 169 TLYRLSGWQRFVQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYV 228

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289
             A++ +DL  + +A+LTM  VI L DQL +RP++ WS+KFRLE++ G    +SW+  L 
Sbjct: 229 EAAVQAEDLPKLGWALLTMAVVILLVDQLFWRPLVAWSDKFRLEQSAGAAAPESWLYDLL 288

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
                 R IG    N+ +P      +L   L  +R+  P N     + +R   +L    +
Sbjct: 289 TTARIPRLIG----NWLAPSRELADRLLSHLTRLRWGDPPN---PEAERRRERLLTQLSW 341

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
             + G+ I I +    ++     + +VL    LG +T+ RV VL++ A++IW P+G+ IG
Sbjct: 342 AAIAGIGIWIVY----FVTTTVGFGEVLLTFGLGILTLLRVSVLLVFATVIWTPIGVAIG 397

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           F P ++  +QP  Q LAAFPAN  FP          ++      LLM  G QWYILFN I
Sbjct: 398 FNPGLAKLLQPVVQFLAAFPANFLFPFATLFFIRTQISIEWGSILLMSLGAQWYILFNSI 457

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGA + P D +E+A    + GW+ W+ +I+PGIF  +VTG ITA GGAWNASIVSE+ +W
Sbjct: 458 AGAQSIPTDLREMAVDVGLRGWQRWQKLIIPGIFSAWVTGGITASGGAWNASIVSEIVAW 517

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           G   L+ TGLG YIAE+T  G +P + LG+ +M  FV+ +NR  W  LY
Sbjct: 518 GSTTLKATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRLFWRRLY 566



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           S+  IF +Q W + F+        P +  E  + + ++GW+ +  + +P      +  A+
Sbjct: 137 SIFAIFTSQVWNMTFSFYQSLRTLPQELVEAVTLYRLSGWQRFVQLEVPAAMVGLIWNAM 196

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + GG W     SE  S  +      GLG+Y+  + +    P++   +L M   +L +++
Sbjct: 197 MSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAVVILLVDQ 256

Query: 572 FLWHPLYLYGTR 583
             W PL  +  +
Sbjct: 257 LFWRPLVAWSDK 268


>gi|291456097|ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT family
           [Bifidobacterium breve DSM 20213]
 gi|291382506|gb|EFE90024.1| ABC transporter, permease protein, NitT/TauT family
           [Bifidobacterium breve DSM 20213]
          Length = 596

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/571 (43%), Positives = 351/571 (61%), Gaps = 13/571 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI  +   +   + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RIAADALVIAGILALFGLIAWILPAIGEPIGPKGVPS--SVSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTFVY T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + PR+L+E +RS RL+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+    
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD----RLFQPVGELF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI-FWFCVVCGVAIGIAWQSIGYIVNHFT 372
             L R LG     +P     + +    S +LD+ F   VV   A G+  + +  I     
Sbjct: 327 DTLTRPLGRTGGRWP-----VETKSTRSRVLDVLFMVVVVTASAFGVI-ELMLVIHRDAG 380

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++ + + LG +T  RV +L I+ S+IW+PVG  IG  P +S  +QP  Q+LA+FP+N 
Sbjct: 381 FDELGHALALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNF 440

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V        +N N    LLM  GTQWYILFNVIAGAS  P+D +E+A SF +  W+
Sbjct: 441 TFPFVTLWFVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQ 500

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G  
Sbjct: 501 RWRELILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDT 560

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              ++GV +M  FV+A+NR  W+PL     R
Sbjct: 561 VRTIIGVAVMSVFVVAVNRLFWNPLQRLAER 591


>gi|86607766|ref|YP_476528.1| taurine ABC transporter permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556308|gb|ABD01265.1| NitT/TauT family ABC transporter, permease protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
          Length = 575

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/529 (46%), Positives = 337/529 (63%), Gaps = 12/529 (2%)

Query: 51  IVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
           +VP I LD  +LP YA+R+TLRM  A+  S LFT +Y  +AAKSR    +L+P+LD++QS
Sbjct: 49  VVPRIDLDPRNLPYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQS 108

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P+LGFL+ TV  F+ L+PG ++G E A+IFAIFTSQVWNMTFS YQSL  +P++L E +
Sbjct: 109 VPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAA 168

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
             +RLSGWQ+F  L VP +M GL+WN MMS  GGWFFV ASE I V +    LPG+GSY+
Sbjct: 169 TLYRLSGWQRFTQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYV 228

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289
             A++ +DL  + +A+LTM GVI L DQL +RP++ WS+KFRLE+++G    +SW+  L 
Sbjct: 229 EAAVQAEDLPKLGWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLL 288

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
                 R IG  SW   SPL+  V +L   L   R H+ +  L   + +R   +L     
Sbjct: 289 TTARIPRLIG--SW--LSPLAELVDRLLSYL--TRPHWVDP-LSPEAERRRERLLTQLSR 341

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
             + G+ I I +    ++     + +V+    LG +T+ RV VL++ A++IW P+G+ IG
Sbjct: 342 AAIGGIGIWIVY----FVATTVGFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIG 397

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           F P ++  +QP  Q LAAFPAN  FP          ++      LLM  G QWYILFN I
Sbjct: 398 FNPKLAKLLQPVVQFLAAFPANFLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSI 457

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGA + P D +E+A    + GW+ WR +I+PGIF  +VTG +TA GGAWNASIVSE+ +W
Sbjct: 458 AGAQSIPTDLREMAVDVGLRGWQRWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAW 517

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           G   L  TGLG YIAE+T  G +P + LG+ +M  FV+ +NR  W  LY
Sbjct: 518 GSTTLTATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRLFWRRLY 566



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           S+  IF +Q W + F+        P +  E A+ + ++GW+ +  + +P      +  A+
Sbjct: 137 SIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFTQLEVPAAMVGLIWNAM 196

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + GG W     SE  S  +      GLG+Y+  + +    P++   +L M   +L +++
Sbjct: 197 MSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAGVILLVDQ 256

Query: 572 FLWHPLYLYGTR 583
             W PL  +  +
Sbjct: 257 LFWRPLVAWSDK 268


>gi|311063794|ref|YP_003970519.1| ABC transporter permease [Bifidobacterium bifidum PRL2010]
 gi|310866113|gb|ADP35482.1| Permease protein of ABC transporter system [Bifidobacterium bifidum
           PRL2010]
          Length = 593

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/574 (42%), Positives = 354/574 (61%), Gaps = 19/574 (3%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +   V  + D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309
            L D LL++P+  W+ KFR+ +   +    S VL + R+   ++ L  +G        P+
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG-------RPI 321

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +N +  L R LG     +P         +R +  LDI +  ++    +   W  + +I +
Sbjct: 322 ANLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS  +QP  Q+LA+FP
Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFP 434

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +N  FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+ 
Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  
Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G   + ++GV +M  FV+ +NR  W PL  Y  R
Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQTYAER 588


>gi|310286892|ref|YP_003938150.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
 gi|309250828|gb|ADO52576.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
          Length = 593

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/574 (42%), Positives = 354/574 (61%), Gaps = 19/574 (3%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +   V  + D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309
            L D LL++P+  W+ KFR+ +   +    S VL + R+   ++ L  +G        P+
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG-------RPI 321

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           ++ +  L R LG     +P         +R +  LDI +  ++    +   W  + +I +
Sbjct: 322 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS  +QP  Q+LA+FP
Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFP 434

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +N  FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+ 
Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  
Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G   + ++GV +M  FV+ +NR  W PL  Y  R
Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 588


>gi|320450800|ref|YP_004202896.1| ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150969|gb|ADW22347.1| ABC transporter, permease protein [Thermus scotoductus SA-01]
          Length = 553

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/535 (45%), Positives = 332/535 (62%), Gaps = 24/535 (4%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
            PI+LD   LP+YA RT  RM  A+++S LFT VYA LAAK+R L   L+ +LDI+QS+P
Sbjct: 42  TPISLDPRHLPEYALRTAFRMGVALLLSTLFTLVYAPLAAKTR-LEPFLIAVLDILQSVP 100

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           ILGFL  +V     L+PGK +G ELAAIFA+FTSQ WNM FS YQSL  +PR+LEE +R 
Sbjct: 101 ILGFLAASVAALSGLFPGKALGFELAAIFAVFTSQAWNMAFSFYQSLKTLPRELEEAARL 160

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           +RL+  Q+F  L +P+++PGLVWN MMSMSGGWFFVVASE I VG T + LPG+GSY+A 
Sbjct: 161 YRLTPPQRFLRLELPYALPGLVWNAMMSMSGGWFFVVASEAISVGKTEVDLPGVGSYLAR 220

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           A+ + ++ A+ YA+L ML  I LYDQLLFRP++ WS +F+ E   G   A SWVL L R+
Sbjct: 221 ALAQGNMEALAYALLAMLLTILLYDQLLFRPLVAWSERFKYEERPGEATARSWVLDLLRR 280

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           +   R +G   W   + L             +RFH P            +  L  +    
Sbjct: 281 SRATRRLG--EWLAEALLER----------ALRFHPPR-----------ALGLPPWLGPA 317

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +      +  ++   ++      + L  I LG  T  RV+ ++++A+ +W+PVG+ +G R
Sbjct: 318 LLTALGLLGLEAAARLLLPLGPGEWLRAIALGFFTFLRVMGILLLATAVWVPVGVLLGLR 377

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P ++ ++Q   Q LAAFPAN+ +P     +  Y L+  ++ + LM  GTQWYILFNV AG
Sbjct: 378 PRVAVRVQALLQFLAAFPANLLYPFAAYLLLRYRLSMEVFSAFLMALGTQWYILFNVTAG 437

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A+A P D  E A ++ ++G R WR ++LPG+FPY VTG +TA GG WNASIV+EV  WG 
Sbjct: 438 ATALPADLLEAARAYRLSGARLWRRLLLPGVFPYLVTGLVTASGGTWNASIVAEVVQWGP 497

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             L  TGLGAYI  +TE G    ++LG+ +M   V+ LNR LW  LY +     R
Sbjct: 498 HRLEATGLGAYITRATEAGDERRLLLGIAMMSLMVVTLNRLLWRRLYQWAEERFR 552


>gi|313139598|ref|ZP_07801791.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132108|gb|EFR49725.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB
           41171]
          Length = 570

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/574 (42%), Positives = 353/574 (61%), Gaps = 19/574 (3%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +   V  + D+H LP YA R+  RM
Sbjct: 8   RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 66  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 126 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 185

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 186 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 245

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309
            L D LL++P+  W+ KFR+ +   +    S VL + R+   ++ L  +G        P+
Sbjct: 246 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG-------RPI 298

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           ++ +  L R LG     +P         +R +  LDI +  ++    +   W  + +I +
Sbjct: 299 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 351

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS   QP  Q+LA+FP
Sbjct: 352 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFP 411

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +N  FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+ 
Sbjct: 412 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 471

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  
Sbjct: 472 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 531

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G   + ++GV +M  FV+ +NR  W PL  Y  R
Sbjct: 532 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 565


>gi|224282450|ref|ZP_03645772.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium bifidum NCIMB 41171]
          Length = 593

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/574 (42%), Positives = 353/574 (61%), Gaps = 19/574 (3%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +   V  + D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309
            L D LL++P+  W+ KFR+ +   +    S VL + R+   ++ L  +G        P+
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG-------RPI 321

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           ++ +  L R LG     +P         +R +  LDI +  ++    +   W  + +I +
Sbjct: 322 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS   QP  Q+LA+FP
Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFP 434

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +N  FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+ 
Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  
Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G   + ++GV +M  FV+ +NR  W PL  Y  R
Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 588


>gi|300309875|ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300072660|gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 581

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/572 (42%), Positives = 347/572 (60%), Gaps = 18/572 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L   ++ G++   LH  +   V  D  D + +      +P YA RT LRM  A   SL
Sbjct: 22  DALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFAFSL 81

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            F      LAAKSRR   +++P LDI+QS+P+LGFL+ TV  FM L+PG ++G E AAIF
Sbjct: 82  FFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIF 141

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFT QVWNM F  Y S+  IP D++E + ++RL+ WQ+F  + +P S   L+WN MMS 
Sbjct: 142 AIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSMMSF 201

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            GGWFFV  SE I V +  + LPG+GSY+A AI + D  A L+A++ ML +I + DQL++
Sbjct: 202 GGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVW 261

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KF++E T    P  SWV  L R +    ++    W    PL + + +     
Sbjct: 262 RPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQ---PLGDWLAR--HRP 316

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ----SIGYIVNHFTYQDV 376
           G      P    +    +RV   L       +CG+ I  A +    +I  +    ++   
Sbjct: 317 GTSAAPTPARITRERWTKRVLTGL-------ICGLLIFEALRGLVAAIDALHGAMSWSLF 369

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +++WLG +TM RV+ + +IA++IW PVG+WIG +PHI+   QP AQ+ A+FP N+ FPL
Sbjct: 370 GHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPL 429

Query: 437 VVSCVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           VV      +++ N W S+L+I  GTQWYILFNVIAGA A PND KE A  + ++ W  W+
Sbjct: 430 VVGWFVAANVSMN-WGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP IFP++VTGA TA GGAWNASIV+E+ASWG + L+  GLGAYI+  T+ G  P +
Sbjct: 489 TLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLI 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +  + +M  FV+ +N+F+W  LY +  R  RL
Sbjct: 549 IASIGVMSMFVVLMNKFVWRRLYAFAERRFRL 580



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 5/207 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR+L+  VI+ L              +     P+  I  S P+   +TF +V  +  +
Sbjct: 379 TMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPV--NMTFPLV--VGWF 434

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +     +I  I     W + F++      IP DL+E +R + LS W  +  L +P 
Sbjct: 435 VAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPA 494

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P  V     +  G W   + +E+   GD  +   G+G+YI+   K  D   I+ ++  
Sbjct: 495 IFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGV 554

Query: 248 MLGVIFLYDQLLFRPMIVWSN-KFRLE 273
           M   + L ++ ++R +  ++  +FRL+
Sbjct: 555 MSMFVVLMNKFVWRRLYAFAERRFRLD 581


>gi|320450206|ref|YP_004202302.1| ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150375|gb|ADW21753.1| ABC transporter, permease protein [Thermus scotoductus SA-01]
          Length = 557

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/535 (46%), Positives = 340/535 (63%), Gaps = 22/535 (4%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           PI+LD   LP+Y  RT  RM  A ++S LFT VYA LAAK+R L   L+ +LDI+QS+PI
Sbjct: 43  PISLDPLKLPEYTLRTAFRMGVAFLLSTLFTLVYAPLAAKTR-LEPFLISLLDILQSVPI 101

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           LGFL  T   F  L+PG+ +G ELAAIFA+FTSQ WN+ FS YQSL  +PR+L+E +  F
Sbjct: 102 LGFLAATAGAFAALFPGRALGYELAAIFAVFTSQAWNIAFSFYQSLKTLPRELDEAATLF 161

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           RLS WQ+F+ L +PF++PGLVWN MMSMSGGWFFVVASE I VG T + LPGIGSY+A A
Sbjct: 162 RLSPWQRFFRLELPFALPGLVWNAMMSMSGGWFFVVASEAIAVGKTQVELPGIGSYLATA 221

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
           I + +  A+L A L+ML  I  YDQLLFRP++ WS +F+ E   G+ PA SWVL L R+T
Sbjct: 222 IAQGNGRAVLLAALSMLVAILAYDQLLFRPLVAWSQRFKYEERPGLEPARSWVLDLLRRT 281

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           + LR I  ++   FS     + +L R     R   P+    L           I W  + 
Sbjct: 282 HTLRGIAEAT---FSWALEALFQLERRRPPRRLILPQWVPVLPLLLLGGIGAFILWRQL- 337

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                    Q +G++       +V  V  LG  T  RV+ ++++A+ IW+PVGI +G RP
Sbjct: 338 ---------QPLGWL-------EVARVFLLGFFTFLRVMGVLLLATAIWVPVGILLGLRP 381

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            ++ +++   QLLAAFP N+ +PL+   +  +HL+  ++ + LM  GTQWYILFN +AG+
Sbjct: 382 RVAQRVEALLQLLAAFPVNLLYPLLALFLLRHHLSLEVFSAFLMALGTQWYILFNAVAGS 441

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            A P D KE A SF + G   WR ++LPG FP+ +TG ITA GG WNA+IV+EV  WG +
Sbjct: 442 MALPEDLKEAARSFGLKGLTLWRRLLLPGTFPHILTGLITASGGTWNAAIVAEVVQWGSL 501

Query: 533 HLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            L+ TGLG+YIA  T E+G  P ++LG+ +M  +V+ +NRF+W  LY       R
Sbjct: 502 TLQATGLGSYIARWTLEEGQGPHLLLGIAVMSLYVVVINRFVWRRLYRLAEERFR 556


>gi|171914592|ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 582

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/569 (42%), Positives = 345/569 (60%), Gaps = 10/569 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           DL+  + ++G++  +LH  +   V  D     P+   V ++P YA RT LRM  A   SL
Sbjct: 21  DLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMWMAFACSL 80

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FTFV    AAK+R    V++P LD++QS+P+LGFL+ TV  FM L+PG + G E A IF
Sbjct: 81  VFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFGVECACIF 140

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AIFT QVWNMTF  Y SL  IP D+EE + ++ L+ WQ+F  + +P SM  L++N MMS 
Sbjct: 141 AIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLIFNSMMSF 200

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            GGWFFV  SE I V +  I LPG+GSY+A A++  D  A L+A+  ML +I   DQL++
Sbjct: 201 GGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIILASDQLVW 260

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++K+R+E T    P  SW+  L R+     +  +       PL + ++ L   L
Sbjct: 261 RPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHR----LEPLCDWIRHLTFRL 316

Query: 321 GVIRFHFPENFLQLCS-NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
             +    P++ + + S   R   ++ + W    C   +  A   +  + +H +   +  +
Sbjct: 317 TTVEPSRPQSRVPMGSLVVRGLGLVVLAWVGSKCATGLVAA---VVNVRDHVSPAQMGNI 373

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
              G  T+ RV+V+  +A++IW+PVG+WIG RP ++   QP AQ+ A+FP N+ FP VV 
Sbjct: 374 AMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFPFVVG 433

Query: 440 CVSYYHLNPNLWLSL-LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +H+ P  W S+ LM  GTQWYILFNV+AGA A PND KE A ++ + GW  WR +I
Sbjct: 434 FYVAWHI-PMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWRTLI 492

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP IFPY+VTGA TA GGAWNASIV+E+A+WG   L+  GLGA +AE+T +G  P ++  
Sbjct: 493 LPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVIICS 552

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + +M  FV+ +NR LW  LY    R  RL
Sbjct: 553 IAMMSLFVVLMNRVLWRRLYRLAERRFRL 581


>gi|121535326|ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121306112|gb|EAX47041.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 580

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/581 (41%), Positives = 345/581 (59%), Gaps = 34/581 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           SRR    + D+L    V  ++  +L+      +P    + + I+ D   LP YA R+ LR
Sbjct: 10  SRRF--GLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLR 67

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  A   SLLFTF+Y ++AAKSR    VLVP+LDI+QS+P+LGFL+ T+  F+ L+P  +
Sbjct: 68  MFIAYGASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSL 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELA+IFAIFT Q WNMTFS Y SL  +P+DL+E +   RL+ WQ+F  L VPF+M  
Sbjct: 128 LGVELASIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMIS 187

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWN MMS  G WFF+ ASE I V +  I LPG+GS++A A+++ ++ A+ YA+LTM+ +
Sbjct: 188 LVWNSMMSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIM 247

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I L DQL +RP++VWS KF++ERT  I  + S V  + ++     F+ ++   FF P++ 
Sbjct: 248 IMLVDQLFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRA---VFVAWAQKYFFGPITQ 304

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---SIGYIV 368
            +               ++    C+         I     +  + + + W    +  Y V
Sbjct: 305 LI---------------DSAFNRCARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYV 349

Query: 369 NHFTYQDVL-----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              TYQ +L            +I LG  T+ RV    +I  +  +PVG+WIG  P +S  
Sbjct: 350 GQQTYQGILLIASMGFDKLVKIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKF 409

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            QP  Q+ A+FPAN+ +P VV     Y +N  L   LLM+ GTQWYILFNVIAGA A P 
Sbjct: 410 FQPIVQVTASFPANMIYPFVVVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPT 469

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D KE ++ F ++GW+ WR +ILP IFP+ +TG ITA GGAWNASIVSE+ +W    L  T
Sbjct: 470 DLKEASTVFKLSGWQKWRKLILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNAT 529

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           GLG +I + TE G +  ++ G+++MC FV+ +NR  W  LY
Sbjct: 530 GLGNFIGQVTEAGDWSGILGGIIVMCAFVIIINRLFWRRLY 570



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-----SLLMIFGTQ-WYILFNVIAGAS 473
           P   +L + P   F  L V+   +  L PN  L     S+  IF  Q W + F+     +
Sbjct: 98  PLLDILQSVPVLGF--LSVTITMFIGLFPNSLLGVELASIFAIFTGQCWNMTFSFYHSLT 155

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D KE A+   +  W+ +  + +P      V  ++ + GGAW     SE  +  +  
Sbjct: 156 TLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNSMMSFGGAWFFLAASEAITVLNQD 215

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +R  G+G+++A + EKG+   V   +L M   ++ +++  W P+ ++  +
Sbjct: 216 IRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVDQLFWRPIVVWSQK 265


>gi|308235357|ref|ZP_07666094.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311115105|ref|YP_003986326.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
 gi|310946599|gb|ADP39303.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 582

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/570 (40%), Positives = 349/570 (61%), Gaps = 13/570 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R + +I   +  + + G+   LL  I +   P+ I   V  + D+ +LP Y  R+  RM+
Sbjct: 21  RFWSDIIVCVGIIALFGVSAFLLQRINQPIGPKGIPSAV--STDLINLPYYTLRSVFRMM 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A++ SL+FT +Y +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG ++G
Sbjct: 79  LALIASLIFTIIYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMMG 138

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  L+
Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A +  E  L  I +A+L+M+ V+ 
Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGVGSFVAQSAAENKLGNIWWAILSMIVVVL 258

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
             D  L++P+  W+ +FR+ ++       S VL L R ++    I       FSP+   +
Sbjct: 259 AIDFFLWKPLTAWAERFRITQSASDEERKSAVLTLIRHSHADEVIS----KLFSPIREWL 314

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           + + R  G     +P       ++QR   + D+ +  V+  + +G+A Q + ++      
Sbjct: 315 EIITRPFGRTGSQWPRK-----ASQR--KLGDLVFNIVMAVLILGLAAQMLYFVATRTGL 367

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+      LG +T  RV VLI ++S+IW+PVG++IG  P IS  +QP  Q+LA+FPAN  
Sbjct: 368 QEFATAGALGALTFARVAVLIFVSSLIWVPVGVYIGMNPKISRIMQPVVQILASFPANFV 427

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  +     +H++      +LM  GTQWYILFNVIAGASA P+D +E+A SF +     
Sbjct: 428 FPFAMMWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMARSFRLNRMLK 487

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W+ ++LP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G   
Sbjct: 488 WKTLVLPAIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMATQGLGAYITNATTVGDSV 547

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           + ++GV +M   V+  NR  W PL  Y  +
Sbjct: 548 KTLVGVTVMSLIVVLSNRLFWTPLQRYSAK 577


>gi|302527762|ref|ZP_07280104.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. AA4]
 gi|302436657|gb|EFL08473.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. AA4]
          Length = 577

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/534 (43%), Positives = 328/534 (61%), Gaps = 11/534 (2%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ D   LP YA R+ LRM  A+V+S+ FTF YAT AA+ RR   +L+P LDI+QS+P+L
Sbjct: 54  VSTDPAELPYYAGRSLLRMFVALVLSVGFTFCYATAAARLRRTEKILLPALDILQSVPVL 113

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GFL+ T+  F+ L+PG  +G E A+IFAIFTSQ WNMTF+ + SL + PRDL+E SR  R
Sbjct: 114 GFLSVTITGFIALFPGSQLGLECASIFAIFTSQAWNMTFAFHHSLVSQPRDLDEASRLLR 173

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           LS WQ+FW + VP  M  LVWN MMS  GGWFF+ ASE + V +    LPGIG+Y+A A 
Sbjct: 174 LSRWQRFWRVDVPSGMIPLVWNGMMSFGGGWFFLTASEALSVNNQKFALPGIGAYVATAS 233

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
           +E DL  +L A+  M+ ++   + L +RP+  WS +FR+E +       S VL L R++ 
Sbjct: 234 EEGDLGKVLLAVGVMVVLVVGVNVLFWRPLTAWSERFRIENSEAAEAPRSLVLDLLRRSR 293

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
               +G        PL        R L V  F   E  L+    +R +   DI +  VV 
Sbjct: 294 IPTLLGRVLGKLVFPLD-------RALAV--FGLAEYPLRFSPARRRAA--DIVFSVVVF 342

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G+ +    + + +I     Y ++ +V+ LG IT  RVV L+++ +++W+PVG+WIG  P 
Sbjct: 343 GLILYGTVRMVLFIGETTGYGEIGHVLLLGLITFARVVALVVVGTLVWVPVGVWIGMNPR 402

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +S   QP  Q+LA+FPAN  FPL+ + +    ++ +    LLM  G QWYILFNVIAGAS
Sbjct: 403 VSRLAQPVVQVLASFPANFLFPLITAVLLATGISLDWGGILLMSLGAQWYILFNVIAGAS 462

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P+D +E +++  +    WWR ++LP +FP YVTG ITA GGAWNASIV+E+ S+  + 
Sbjct: 463 AIPHDLREASANLRLPRALWWRRLVLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVT 522

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           L  TGLGAYIA++T  G    ++LGV +M  +V+ LNR  W  LY    R   L
Sbjct: 523 LTATGLGAYIADATSTGDSGRILLGVAVMSLYVVGLNRLFWRRLYRLAERRFSL 576


>gi|320457401|dbj|BAJ68022.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 596

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/570 (41%), Positives = 347/570 (60%), Gaps = 11/570 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RML
Sbjct: 33  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRML 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    + +     F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +      + R   +  +F   V+   A G+  Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             ++GV +M  FV+A+NR  W+PL     R
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 591


>gi|213691332|ref|YP_002321918.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522793|gb|ACJ51540.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 594

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/570 (41%), Positives = 347/570 (60%), Gaps = 11/570 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RML
Sbjct: 31  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRML 88

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 89  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 148

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 149 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 209 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 268

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    + +     F P+ +  
Sbjct: 269 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 324

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +      + R   +  +F   V+   A G+  Q +  I     +
Sbjct: 325 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 379

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 380 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 439

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 440 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 499

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 500 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 559

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             ++GV +M  FV+A+NR  W+PL     R
Sbjct: 560 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 589


>gi|167626908|ref|YP_001677408.1| anion ABC transporter permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596909|gb|ABZ86907.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 601

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/561 (42%), Positives = 331/561 (59%), Gaps = 18/561 (3%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  + T    +     ++LD+  LP Y + T +RM   + ISLL TF +  LAAKS+R
Sbjct: 40  LGGSIDYTSQSSVQQYSEVSLDLWLLPYYTAETVMRMFIGLGISLLITFTFGALAAKSKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P +DI+QSIPILGF   TV  F+ L+P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQ+FW + VPFSMPGLVWN MMSMS  WF +VASE I+V
Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219

Query: 216 GDTV-----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             +      I LPGIGS+I  A   QD  A+  A++ ML  I LYDQLLFRP++VWS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L        + SW L + +K+   +       +  S L N ++   + L  + ++ P +
Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVN-IRFFKKNLNKV-YNQPRH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITM 387
             Q    ++ + +  I W      + +G+   A+Q++    +     +   V   G +T 
Sbjct: 338 RKQ---EKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTG 394

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           FRVVVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + +  + V    LN
Sbjct: 395 FRVVVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLN 454

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            N+W  LLM  GTQWYILFNVIAGASA P++ K  A +  + G+  WR  + P + PYYV
Sbjct: 455 FNIWCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYV 514

Query: 508 TGAITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIM 562
           TGAITA GGAWNASIV E  +WG      ++ +GLG YI   T  +      V+LGV++M
Sbjct: 515 TGAITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVM 574

Query: 563 CCFVLALNRFLWHPLYLYGTR 583
           C  V+A N+  W  LY Y   
Sbjct: 575 CVLVVASNKLFWRRLYNYAEN 595


>gi|317482033|ref|ZP_07941058.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|291517374|emb|CBK70990.1| ABC-type anion transport system, duplicated permease component
           [Bifidobacterium longum subsp. longum F8]
 gi|316916600|gb|EFV37997.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 596

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/570 (41%), Positives = 346/570 (60%), Gaps = 11/570 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RLASDVLVAAGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    + +     F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVDDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +      + R   +  +F   V+   A G+  Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L +  S+IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLACSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             ++GV +M  FV+A+NR  W+PL     R
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 591


>gi|299135927|ref|ZP_07029111.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298602051|gb|EFI58205.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 590

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/539 (42%), Positives = 336/539 (62%), Gaps = 14/539 (2%)

Query: 41  ETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           E+ V     D++P I+LD  +LP YA+R+TLRM  A+  S LFTFVY   AA+SRR   V
Sbjct: 55  ESLVKFSPPDVIPTISLDPRNLPNYAARSTLRMFIALGFSTLFTFVYGYAAARSRRAEKV 114

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+P+LDI+QS+P+LGFL+ TV  F+ ++ G ++G E A+IFAIFT Q WNM FS YQSL 
Sbjct: 115 LIPLLDILQSVPVLGFLSVTVTLFIAMFRGSLLGLEAASIFAIFTGQAWNMAFSFYQSLR 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P +++E+   + LS W++F  L +P S+ GLVWN MMS  GGWFF+ ASE I V +  
Sbjct: 175 TVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGMMSFGGGWFFLAASESISVLNRQ 234

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279
             LPG+GSY+A AI  +DL A+ +A++TM+ ++ L DQ  ++P++  +++++LE + G  
Sbjct: 235 YTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQFFWKPLVTIADRYKLELSAG-E 293

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
               WV+ L+R  +              P    + +L   L  ++ H          +  
Sbjct: 294 ERRFWVVDLWRAASLPALFEC----ILGPSLIRLDRLFSNLTRVKPH--------PGHTS 341

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S   D  +  VV  +A+G+   ++ +I++     +V +   LG  T  RV+ L++++++
Sbjct: 342 PSKTADRVFNVVVSLLALGMIVAAVRFILSSVGMAEVGHAALLGLATGARVLALLVLSTL 401

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           IW P+G+ IGF P ++   QP  Q+ A+FPAN  FP          ++ N    LLM  G
Sbjct: 402 IWTPIGVAIGFNPRLARLSQPLVQICASFPANFLFPFATLIFIRLGIHLNWGSMLLMALG 461

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            QWY+LFNVI GA + PND +E+A+S  + G+R W+++I P IF  +VTGAITA GGAWN
Sbjct: 462 AQWYLLFNVIGGAQSVPNDLREMATSIGLRGFRKWKFLIGPSIFGSWVTGAITASGGAWN 521

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           ASIV+E+ SWGH  LR  GLGAYIA++T  G +P +VLGV +M  FV+ LNR LW PLY
Sbjct: 522 ASIVAEIVSWGHTTLRAAGLGAYIADATSVGDWPRIVLGVSLMSVFVVTLNRILWKPLY 580



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%)

Query: 453 SLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           S+  IF G  W + F+        P +  E+ + + ++ W  +  + LP      V   +
Sbjct: 153 SIFAIFTGQAWNMAFSFYQSLRTVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGM 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + GG W     SE  S  +      GLG+Y+A +        V   V+ M   VL +++
Sbjct: 213 MSFGGGWFFLAASESISVLNRQYTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQ 272

Query: 572 FLWHPLYLYGTR 583
           F W PL     R
Sbjct: 273 FFWKPLVTIADR 284


>gi|241667484|ref|ZP_04755062.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254876031|ref|ZP_05248741.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842052|gb|EET20466.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 601

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/561 (42%), Positives = 332/561 (59%), Gaps = 18/561 (3%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  + T    +     ++L++  LP Y + T +RM   + ISLL TF++  LAAKS+R
Sbjct: 40  LGGSIDYTNQASVQQYSEVSLNLWLLPYYTAETVMRMFIGLGISLLITFIFGALAAKSKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P +DI+QSIPILGF   TV  F+ L+P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQ+FW + VPFSMPGLVWN MMSMS  WF +VASE I+V
Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219

Query: 216 GDTV-----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             +      I LPGIGS+I  A   QD  A+  A++ ML  I LYDQLLFRP++VWS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L        + SW L + +K+   +       +  S L N ++   + L  + ++ P +
Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVN-IRFFKKNLNKV-YNQPRH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITM 387
             Q    ++ + +  I W      + +G+   A+Q++    +     +   V   G +T 
Sbjct: 338 RKQ---EKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTG 394

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           FRVVVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + +  + V    LN
Sbjct: 395 FRVVVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLN 454

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            N+W  LLM  GTQWYILFNVIAGASA P++ K  A +  + G+  WR  + P + PYYV
Sbjct: 455 FNIWCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYV 514

Query: 508 TGAITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIM 562
           TGAITA GGAWNASIV E  +WG      ++ +GLG YI   T  +      V+LGV++M
Sbjct: 515 TGAITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVM 574

Query: 563 CCFVLALNRFLWHPLYLYGTR 583
           C  V+A N+  W  LY Y   
Sbjct: 575 CVLVVASNKLFWRRLYNYAEN 595


>gi|296453563|ref|YP_003660706.1| binding-protein-dependent transporter inner membrane component
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296182994|gb|ADG99875.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. longum JDM301]
          Length = 596

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/564 (41%), Positives = 345/564 (61%), Gaps = 11/564 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++ M+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVMMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    + +     F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +      + R   +  +F   V+   A G+  Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDAVFTVLVLAACAFGLV-QLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S+IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
             ++GV +M  FV+A+NR  W+PL
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPL 585


>gi|209522523|ref|ZP_03271110.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209497040|gb|EDZ97308.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 402

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/415 (49%), Positives = 280/415 (67%), Gaps = 20/415 (4%)

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L
Sbjct: 1   RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            AI + +L M  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +   
Sbjct: 61  HAIGWVILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLIRRTRLIH-- 118

Query: 299 GYSSWNFFSPLSNNVKKLCR------TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
                    PL   + +  R           RFH P++       ++ S + DI W  +V
Sbjct: 119 -----RLLVPLGWMLARAARVRFQLPAFSAPRFHIPQS-------EKSSKLGDIIWAAIV 166

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               + + ++   Y+    +  ++ +V  LG IT+ RVV+LI IAS+IW+P+G+ IG RP
Sbjct: 167 LLATVYVVYRVFLYVRTGVSMDEIGHVFVLGLITLLRVVLLIAIASVIWVPIGVLIGLRP 226

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            ++ K+QP AQ LAAFPAN+ FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA
Sbjct: 227 ALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGA 286

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           S++PND++E A++FHI GW+WWR ++LPGIFPYYVTGAITA GGAWNASIVSE   WG  
Sbjct: 287 SSYPNDYREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDT 346

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +   GLGAYIA++T  G FP++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 347 KVAAHGLGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 401



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     + P D  E + +F + GWQ +  + +P   P  V   + +  G W   
Sbjct: 276 WYILFNVIAGASSYPNDYREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNAS 335

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+G+YIA      D   I+  +  M   + L+++LL+RPM  ++
Sbjct: 336 IVSEFVQWGDTKVAAHGLGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYA 395

Query: 268 N-KFRLE 273
             K RL+
Sbjct: 396 EGKLRLD 402


>gi|297242881|ref|ZP_06926819.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis AMD]
 gi|296889092|gb|EFH27826.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis AMD]
          Length = 582

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 340/564 (60%), Gaps = 13/564 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R + +I   +  + V G+   L+  I +   P  I     ++ D+ +LP Y  R+  RML
Sbjct: 21  RFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPS--KVSTDLINLPYYTLRSVFRML 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V SL+FT VY ++AA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG ++G
Sbjct: 79  IALVASLIFTIVYGSIAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMLG 138

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  L+
Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E  L  I +A+++M+ V+ 
Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVL 258

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
             D  L++P+  W+ +FR+ ++       S +L L R ++    I       F P+   +
Sbjct: 259 ALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIREWL 314

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +K+ R  G     +P    Q   ++   ++ ++    +V   A  + +    ++      
Sbjct: 315 EKVTRPFGRTGSKWPHKAAQ---HKLGDWVFNVIMLIIVAAGAAHMLY----FVYTTAGL 367

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + +    LG IT  RV VLI+I+S+IW+PVG+ IG  P IS  +QP  Q+LA+FPAN  
Sbjct: 368 HEFITAGMLGGITFIRVAVLILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPANFI 427

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  ++    +H++      +LM  GTQWYILFNVIAGASA P+D +E+  SF +     
Sbjct: 428 FPFAMAWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRTLR 487

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W+ +ILP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G   
Sbjct: 488 WKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGDSA 547

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
             ++GV +M   V+  NR  W P+
Sbjct: 548 RTLVGVTVMSLIVVLSNRLFWSPM 571



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           S+  IF +Q W + F+      + P +  E   S  +T W+ +  + +P      +   +
Sbjct: 143 SIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLLWNCM 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + GG W     SE+ S  +      G+G+++A++  +     +   ++ M   VLAL+ 
Sbjct: 203 MSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVLALDF 262

Query: 572 FLWHPLYLYGTR 583
           FLW PL  +  R
Sbjct: 263 FLWKPLTAWAER 274


>gi|283782843|ref|YP_003373597.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298253320|ref|ZP_06977112.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis 5-1]
 gi|283442170|gb|ADB14636.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297532715|gb|EFH71601.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis 5-1]
          Length = 582

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 339/564 (60%), Gaps = 13/564 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R + +I   +  + V G+   L+  I +   P  I     ++ D+ +LP Y  R+  RML
Sbjct: 21  RFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPS--KVSTDLINLPYYTLRSVFRML 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V SL+FT VY +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG ++G
Sbjct: 79  IALVASLIFTIVYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMLG 138

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  L+
Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E  L  I +A+++M+ V+ 
Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVL 258

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
             D  L++P+  W+ +FR+ ++       S +L L R ++    I       F P+   +
Sbjct: 259 ALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIREWL 314

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +K+ R  G     +P    Q   ++   ++ ++    +V   A  + +    ++      
Sbjct: 315 EKVTRPFGRTGSKWPHKAAQ---HKLGDWVFNVIMLIIVAAGAAHMLY----FVYTTAGL 367

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + +    LG IT  RV  LI+I+S+IW+PVG+ IG  P IS  +QP  Q+LA+FPAN  
Sbjct: 368 HEFITAGMLGGITFMRVAALILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPANFI 427

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  ++    +H++      +LM  GTQWYILFNVIAGASA P+D +E+  SF +     
Sbjct: 428 FPFAMAWFMSWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRTLR 487

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W+ +ILP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G   
Sbjct: 488 WKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGDSA 547

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
             ++GV +M   V+  NR  W P+
Sbjct: 548 RTLVGVTVMSLIVVLSNRLFWSPM 571



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           S+  IF +Q W + F+      + P +  E   S  +T W+ +  + +P      +   +
Sbjct: 143 SIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLLWNCM 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + GG W     SE+ S  +      G+G+++A++  +     +   ++ M   VLAL+ 
Sbjct: 203 MSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVLALDF 262

Query: 572 FLWHPLYLYGTR 583
           FLW PL  +  R
Sbjct: 263 FLWKPLTAWAER 274


>gi|208779974|ref|ZP_03247317.1| ABC transporter, membrane protein [Francisella novicida FTG]
 gi|208743978|gb|EDZ90279.1| ABC transporter, membrane protein [Francisella novicida FTG]
          Length = 591

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 326/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L++  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 50  ISLNLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 289

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 336

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 577 RRLYNYAEN 585


>gi|254372120|ref|ZP_04987613.1| hypothetical protein FTCG_01262 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569851|gb|EDN35505.1| hypothetical protein FTCG_01262 [Francisella novicida GA99-3549]
          Length = 599

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|56707421|ref|YP_169317.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669892|ref|YP_666449.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456498|ref|ZP_03664971.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370883|ref|ZP_04986888.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254874257|ref|ZP_05246967.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603913|emb|CAG44898.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320225|emb|CAL08281.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569126|gb|EDN34780.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254840256|gb|EET18692.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158563|gb|ADA77954.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 599

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|89255582|ref|YP_512943.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314089|ref|YP_762812.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|169656490|ref|YP_001427591.2| ABC transporter membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254366983|ref|ZP_04983019.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|254368580|ref|ZP_04984596.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954416|ref|ZP_06559037.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312158|ref|ZP_06802964.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143413|emb|CAJ78586.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115128988|gb|ABI82175.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134252809|gb|EBA51903.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|157121483|gb|EDO65674.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551558|gb|ABU60635.2| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 599

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|167010348|ref|ZP_02275279.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Francisella tularensis subsp. holarctica FSC200]
          Length = 591

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 50  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 289

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 336

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 577 RRLYNYAEN 585


>gi|194324063|ref|ZP_03057838.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           novicida FTE]
 gi|194321960|gb|EDX19443.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 591

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 50  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETYSKSWFLTI 289

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 336

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 577 RRLYNYAEN 585


>gi|118496755|ref|YP_897805.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. novicida U112]
 gi|118422661|gb|ABK89051.1| ABC-type anion transport system, duplicated permease component
           [Francisella novicida U112]
          Length = 599

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETYSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|134302641|ref|YP_001122610.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050418|gb|ABO47489.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 599

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSSWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|187932197|ref|YP_001892182.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187713106|gb|ACD31403.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 599

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/550 (42%), Positives = 322/550 (58%), Gaps = 34/550 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
            +K   ++        F +  SN          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKH- 343

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQ------------DVLYVIWLGCITMFRVVVLIII 396
             V   +   +    +   + +F YQ            +   V   G  T  RV VLI+I
Sbjct: 344 ESVTKRILWNVIIILMILALLYFVYQIVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILI 403

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
            S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM
Sbjct: 404 TSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLM 463

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG
Sbjct: 464 ALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGG 523

Query: 517 AWNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFL 573
           +WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  
Sbjct: 524 SWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLF 583

Query: 574 WHPLYLYGTR 583
           W  LY Y   
Sbjct: 584 WRRLYNYAEN 593


>gi|254375266|ref|ZP_04990746.1| ABC-type anion transport system [Francisella novicida GA99-3548]
 gi|151572984|gb|EDN38638.1| ABC-type anion transport system [Francisella novicida GA99-3548]
          Length = 599

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/549 (41%), Positives = 325/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 58  ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345
            +K   ++        F +  S+          ++   F +  L    NQ+V    D   
Sbjct: 298 LQKAYVVKIFT----TFLAKCSSK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344

Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
                I W  ++  + + +    +Q++         ++   V   G  T  RV VLI+I 
Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM 
Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A N+  W
Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 585 RRLYNYAEN 593


>gi|328675308|gb|AEB27983.1| ABC-type anion transport system, duplicated permease component
           [Francisella cf. novicida 3523]
          Length = 591

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/549 (41%), Positives = 327/549 (59%), Gaps = 32/549 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L +  LP Y + TT+RM   + ISLL TF++ T AAK++R   +++P++DI+QSIP+L
Sbjct: 50  ISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++
Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228
           LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V  +      I LPGIGS+
Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L +
Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEKFVIGDNPSETYSKSWFLTI 289

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV-------- 340
            +K   ++        F++  SNN         ++  +F +  L    NQ+V        
Sbjct: 290 LQKAYVVKIFT----RFWTKCSNN---------IVNINFFKKNLDKAYNQKVHKKAEKHE 336

Query: 341 SYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           S +  I W  ++  + + +    +Q++         ++   V   G  T  RV  LI+I 
Sbjct: 337 STIKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAALILIT 396

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN ++W  LLM 
Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFDIWCILLMA 456

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+
Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516

Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574
           WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+A NR  W
Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNRLFW 576

Query: 575 HPLYLYGTR 583
             LY Y   
Sbjct: 577 RRLYNYAEN 585



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 17/226 (7%)

Query: 373 YQDVLYVIWL----GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           Y D+   +WL       T  R+ + + I+ +I    G W        S I P   +L + 
Sbjct: 47  YSDISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKRAESIIIPLVDILQSI 106

Query: 429 PANVFFPLVVSCVSYYHLNP-NLW-LSLLMIFG----TQWYILFNVIAGASAFPNDFKEV 482
           P   FF + V+   +  + P +LW     +IFG      W ++ +        P + +E 
Sbjct: 107 PVLGFFAITVT--GFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREA 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-----ASWGHIHLRTT 537
           A  + ++ W+ +  + +P   P  V   + +  G+W   + SE      ++   I +   
Sbjct: 165 ADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLP 224

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G+G++I  +    +F  V   ++ M   ++  ++ L+ PL  +  +
Sbjct: 225 GIGSFIDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEK 270


>gi|303232762|ref|ZP_07319447.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302481248|gb|EFL44323.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 582

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/573 (39%), Positives = 345/573 (60%), Gaps = 15/573 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R++ +I   +    + G+   LL    +   P+ I   V  + D+ +LP Y  R+  R
Sbjct: 19  ATRVWSDIVVCVGIFALFGLTAFLLQCTTQPIGPQGIPSTV--STDIVNLPYYTLRSVFR 76

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  A++ SL+FT +Y +LAA S  LG +L+P+LDI+QS+PILGFL+ TV  ++ L+P  +
Sbjct: 77  MFVALIASLVFTILYGSLAAHSSTLGKILIPLLDILQSVPILGFLSATVSIWLVLFPESM 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A++FAIFTSQ WNMTFS Y SL + P++LEE +RS RL+ WQ+FW L +P +   
Sbjct: 137 LGVEAASMFAIFTSQAWNMTFSFYHSLQSEPKELEEAARSLRLTHWQRFWVLSMPNATIA 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A +  EQ L  I +A+L M+ V
Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNNTYALPGIGSFVAQSAAEQKLDNIWWAILAMVIV 256

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           +   D L+++P + W+ KFR+ ++  +    S +L L R ++    +        +PL  
Sbjct: 257 VIAIDFLVWKPFLAWAEKFRITQSASVDERHSAILTLIRHSHADEVLR----ALMAPLRA 312

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-AIGIAWQSIGYIVNH 370
            + +L R  G+           L    RV  M+ I   CV+ GV A+ + +  +   V  
Sbjct: 313 WLDRLTRIFGITGASSKPAAAHL----RVIDMIIIAAACVLIGVFAVNLLY-VVATSVGL 367

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F +    Y   LG +T  RV +L++++S+IW+P+G+ IG  P IS   QP  Q+ A+FPA
Sbjct: 368 FEFA---YAGMLGALTFVRVALLVVVSSLIWVPIGVCIGMNPKISRIAQPIVQICASFPA 424

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N  FP  ++    +H++ ++   +LM  GTQWYILFNVIAGASA P+D +++A+SF +  
Sbjct: 425 NFIFPFAMTWFMAWHIDLSIGSIILMALGTQWYILFNVIAGASAIPDDLRQMATSFQLPL 484

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              W+ +ILP IF  + TGA+TA GGAWNASIV+E+  +G  H+ T GLGAYI  +T  G
Sbjct: 485 IMRWKTLILPAIFGAWCTGALTAAGGAWNASIVAEIVEFGAFHMETQGLGAYITAATTVG 544

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              + ++GV +M   V+  NR +W PL     +
Sbjct: 545 DGAKTLVGVTVMSLIVVVSNRLIWTPLQRLAEK 577


>gi|209521906|ref|ZP_03270577.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209497664|gb|EDZ97848.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 402

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/409 (49%), Positives = 278/409 (67%), Gaps = 8/409 (1%)

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L
Sbjct: 1   RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            A+ + +LTM  VI  YDQ LFRP++ W++KFR+E T+      SW+L + R+T  +   
Sbjct: 61  HAVGWVILTMTVVILAYDQFLFRPLVAWADKFRMETTSSGNAPQSWLLDMMRRTRLIH-- 118

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
                   +P    +    R    I F       +   +++ + + DI W  +V  + + 
Sbjct: 119 -----ELLTPAGVMLATAARIPLRIPFANGRRAGR-ARSEKSTRVGDIVWGILVFMLTVY 172

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           + ++ + Y+    T  +V +V  LG IT+ RVV+LI I+S+IW+P+G+ IG RP ++ K+
Sbjct: 173 VIYRVVSYVRTGVTLDEVGHVFVLGLITLLRVVLLIAISSVIWVPIGVLIGLRPALAEKV 232

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           QP AQ LAAFPAN+ FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+A+PND
Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATAYPND 292

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           ++EVA++F I GW+WWR ++LPG+FPYYVTGAITA GGAWNASIVSE   WG   +   G
Sbjct: 293 YREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGA+IAE+T  G FP+++LGV +M  FV   NR LW PLY +    LRL
Sbjct: 353 LGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFAEARLRL 401



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P D  EV+ +FR+ GWQ +  + +P   P  V   + +  G W   
Sbjct: 276 WYILFNVIAGATAYPNDYREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNAS 335

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+G++IA      D   I+  +  M   + L+++ L+RP+  ++
Sbjct: 336 IVSEFVQWGDTKVAAHGLGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFA 395

Query: 268 N-KFRLE 273
             + RL+
Sbjct: 396 EARLRLD 402


>gi|148240768|ref|YP_001226155.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. WH 7803]
 gi|147849307|emb|CAK24858.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. WH 7803]
          Length = 586

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/537 (41%), Positives = 326/537 (60%), Gaps = 21/537 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +D+ PI      LP YA+R++LRM   + ISL    V  TLAA++     V++P++DI+Q
Sbjct: 65  IDLNPI-----HLPAYAARSSLRMFIGLGISLGICLVVGTLAARNAIAERVILPLVDILQ 119

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           S+P+LGFL  TV +F+NL+ G ++G E A+IFAI T Q+WN+ FS YQSL  +P DL E 
Sbjct: 120 SVPVLGFLAITVAFFINLFRGSLLGLEAASIFAIVTGQLWNLIFSYYQSLRTVPSDLSEA 179

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +  +R SGWQ+F  L +P     LVWN MMS +GGWFF   SE I V +    LPG+GSY
Sbjct: 180 ATLYRFSGWQRFTQLDLPAGSINLVWNGMMSFAGGWFFATQSEAISVNNADYTLPGLGSY 239

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           +A AI  Q L  IL+A++TM+ V+ + DQL +RP++ WS +FRL+      PA SW L L
Sbjct: 240 VAAAIAAQRLDCILWALITMVLVVVISDQLFWRPLVAWSERFRLDSGAAGEPARSWFLDL 299

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
             ++  LR++  +      PL+  +++L +         PE      SN R S  +  + 
Sbjct: 300 LNRSGGLRWLKAAGAITLQPLTRTLRRLTQA--------PEQ----PSNTRESGAVPAWL 347

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             ++  +A       +  I++     + L V+  G +T+ RV+ ++ ++S++++P+ + I
Sbjct: 348 DPLLLLLAGAAVVWGLDVILHEVGPAETLEVLGFGLLTLGRVLAVVALSSLVFLPLAVMI 407

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQWYILF 466
           G RP +S+ +QP   +LA+ PAN+ FP       +  L   +W+   +LM  G+QWY+LF
Sbjct: 408 GLRPRLSTLLQPLILMLASIPANLLFPFFTLLFLFSGL--PMWIGSVILMALGSQWYVLF 465

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AGASA PND +E+   F + G + W   +LP +F  +VTGAITA G AWNASIV+EV
Sbjct: 466 NTTAGASAIPNDLREMEQVFGLRGKQRWSRYLLPAVFSSWVTGAITASGAAWNASIVAEV 525

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            +WG   L+TTGLGAYIAE+T  G  P ++LG+++M  FV+  NR LW PLY    R
Sbjct: 526 VTWGSTTLQTTGLGAYIAEATRSGDGPRILLGLMVMSLFVVGFNRLLWRPLYRIAER 582


>gi|328676212|gb|AEB27082.1| ABC transporter, permease protein [Francisella cf. novicida Fx1]
          Length = 524

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/532 (42%), Positives = 311/532 (58%), Gaps = 34/532 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M   +VISLL TF++ T AAK++R   +++P++DI+QSIP+LGF   TV  F+ ++P  +
Sbjct: 1   MFIGLVISLLITFIFGTWAAKNKRAENIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSL 60

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++LS WQKFW L VPF+MPG
Sbjct: 61  WGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPG 120

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSYIALAIKEQDLLAILYAML 246
           LVWN MMSMSG WF +VASE I+V  +      I L GIGS+I  A   Q+  A+  A++
Sbjct: 121 LVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLSGIGSFIDAANNAQNFTAVGAAIV 180

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           TML  I LYDQLLFRP++ WS KF +        + SW L + +K   ++        F 
Sbjct: 181 TMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQKAYVVKIFT----TFL 236

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +  SN +         +   F +  L    NQ+V    D +   V   +   +    +  
Sbjct: 237 AKCSNKI---------VNIKFFKKNLDKAYNQKVHRKADKY-ESVTKRILWNVIIILMIL 286

Query: 367 IVNHFTYQDV------------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            + +F YQ V              V   G  T  RVVVLI+I S+IW+P+GIWIG RP I
Sbjct: 287 ALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVVVLILITSLIWVPIGIWIGLRPKI 346

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           + K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM  GTQWYILFNVIAGASA
Sbjct: 347 AQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASA 406

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH- 533
            P + K  A +  + G    +  ++P + PYYVTGAITA GG+WNASI+SE  +WG    
Sbjct: 407 IPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSV 466

Query: 534 LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           ++ +G+G YI + T         V+LGV++MC  V+A N+  W  LY Y   
Sbjct: 467 IQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAEN 518


>gi|260892984|ref|YP_003239081.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
 gi|260865125|gb|ACX52231.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
          Length = 572

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/572 (38%), Positives = 346/572 (60%), Gaps = 19/572 (3%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLH---GIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            ++RR   +  D+   + V+ ++  L+H   G+ E       +D+ PI      LP Y  
Sbjct: 7   LVARRF--SFIDVAVILTVLALLYTLIHLGAGMAEPLRMGAKIDLNPI-----HLPYYVG 59

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R+ LRM  A++ SL+F  VY   AA S R   +L+P LDI+QS+P+LGFL+ T+   + L
Sbjct: 60  RSLLRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVAL 119

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +P  ++GAELA+IFA+FT+Q WN+T+  YQSL  IPR+L + +  FRL+ W + W L +P
Sbjct: 120 FPNSMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELP 179

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           FS   LV+N MMS +G WFF+ ASE I V +  I LPG+GSY+A AI  +D+ A++ +++
Sbjct: 180 FSAIPLVYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSII 239

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           TM   I L DQL +RP+ +WS +F+LE+T     +  W+L + ++++ +R  G       
Sbjct: 240 TMAVTIVLVDQLFWRPVAIWSQRFKLEQTKEQMESH-WLLKMLQRSSLVRAFGS---RVL 295

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P+    ++   + G +     E+ L     +R+ ++L +F   ++ G      ++ +  
Sbjct: 296 EPMQ---RRFIISGGRLVAGTAESSLG-AGIKRIVHLLGVFLLLLLIGYTAYYGYRGV-L 350

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++     + +L +  LG  +  RVV  + + ++I +P+G+++G+    + + QPF   +A
Sbjct: 351 LIAQLGLEGILDLFRLGFYSFLRVVAAVALGTLIMLPLGVYLGWNAERARRWQPFITFVA 410

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           +FPAN+ FP         H++       LM+ GTQWYILFNVIAG S+ PND KE A+  
Sbjct: 411 SFPANMLFPFFTILFLRLHISQEWGAIPLMMLGTQWYILFNVIAGVSSLPNDLKEAAAVL 470

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GW+ WRY ILPGIFP+ VTG ITA GGAWNA+IV+EV SWG   L+ TGLGAYI  +
Sbjct: 471 GVKGWKRWRYFILPGIFPFLVTGGITAAGGAWNATIVAEVVSWGDHTLQATGLGAYITNA 530

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           TE G++P ++ G++ M  +V+A+NR  W  LY
Sbjct: 531 TEAGNWPAIMGGIITMSLYVVAINRLFWRRLY 562



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +I + I  I  G W  +       + PF  +L + P   F    ++ +    
Sbjct: 61  SLLRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVALF 120

Query: 446 LNPNLWLSLLMIFG----TQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILP 500
            N  L   L  IF       W I +         P + ++ A+ F +  W R W+  +  
Sbjct: 121 PNSMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELPF 180

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V  A+ +  G+W     SE  +  +  +   GLG+Y+A +        ++L ++
Sbjct: 181 SAIPL-VYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSII 239

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
            M   ++ +++  W P+ ++  R
Sbjct: 240 TMAVTIVLVDQLFWRPVAIWSQR 262


>gi|296141005|ref|YP_003648248.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296029139|gb|ADG79909.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 588

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/576 (41%), Positives = 335/576 (58%), Gaps = 15/576 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYASRTTL 70
            RR    + D+L       +I +++   Q    P D+      +  D  +LP YA+R+ L
Sbjct: 20  GRRGAGIVADVLVVAGAAAMIWLVIRVGQGMDTPIDLQHADARVDTDPANLPYYAARSLL 79

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM  A+  S++FTF YATLAA+SRR   VL+P+LD++QS+PILGFL+ TV  F+ L+PG 
Sbjct: 80  RMFLALGASIVFTFAYATLAARSRRARAVLMPLLDVLQSVPILGFLSITVTLFIALFPGS 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            +G ELAAIFAIFTSQ WNMTF+ YQSL + PRDL E +    LS WQ+FW L VP  M 
Sbjct: 140 TLGLELAAIFAIFTSQAWNMTFAFYQSLISQPRDLGEAAEDIGLSRWQRFWRLDVPSGMI 199

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            LVWN MMS  GGWFF+ ASE + V      LPGIG+Y+A A  + DL  + +A+ TM+ 
Sbjct: 200 PLVWNAMMSFGGGWFFLTASEAVSVAGNEYALPGIGAYVASASADGDLGLVGWAIGTMIV 259

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
           VI   + L + P+  W+ +FRLE +       S VL + R+++     G +     SP+ 
Sbjct: 260 VIIGVNFLFWSPLTAWAERFRLEDSATGREPKSVVLTVLRRSH----AGEAFGRLMSPI- 314

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V    R  GV     P +   +   +R +  L  F   VV  V  G+ W++   I++ 
Sbjct: 315 --VALTDRFFGVFGRSAPSH--DVTPARRRAGDL-AFGIVVVAVVGYGL-WRAAETILST 368

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +V +V  LG  TM RV ++++ A+++W+P+G+ IG  P +S  +QP  Q+ A+FPA
Sbjct: 369 SGIAEVGHVFLLGLATMGRVALVMLFATVVWVPIGVIIGLNPKLSRALQPVIQVFASFPA 428

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N  FPL+ + +   ++  +L   +LM  GTQWYILFNVIA ASA P D  E A    +  
Sbjct: 429 NFLFPLITAVLIAGNIPLDLGGVVLMALGTQWYILFNVIAAASAIPGDLLEAADDMSLPR 488

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK- 549
           W  WRY++LPG+F  YVTG ITA GGAWNASIV+EV S+        GLG YIA++T   
Sbjct: 489 WMRWRYVLLPGVFAGYVTGGITAAGGAWNASIVAEVVSYDGQTYHAFGLGDYIADATAAT 548

Query: 550 --GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                  ++LG+ +MC FV+  N  LW  LY    R
Sbjct: 549 GPAHTSNLLLGISVMCLFVVGTNALLWRRLYRVAER 584


>gi|295696444|ref|YP_003589682.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295412046|gb|ADG06538.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 569

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/538 (42%), Positives = 331/538 (61%), Gaps = 26/538 (4%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G+ E   P+ +     ++LD  +LP YA R+ +RM  A+  S++FT +YA LA++SR  
Sbjct: 35  KGMVEPYAPQSMT----VSLDPSALPYYAGRSLMRMFVALGASVVFTVLYARLASRSRLG 90

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             +L+P+LDI+QS+P+LGFL+ TVV FM L+PG ++G ELA+IFAIFT QVWNMTF  YQ
Sbjct: 91  ERILIPLLDILQSVPVLGFLSVTVVGFMALFPGSLLGPELASIFAIFTGQVWNMTFGFYQ 150

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           S+  +P++L E SR + L G ++F+ L + +    LVWN MMS  GGWFF+  SE I V 
Sbjct: 151 SITGVPKELREASRLYGLGGVRRFFVLDLAYGAVPLVWNSMMSFGGGWFFLAVSESITVM 210

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
              I LPGIGSY+A A+   D+ A+LYAM+TM+ VI + DQL +RP++ W+ +F++E+T 
Sbjct: 211 HRDIRLPGIGSYMAAAMDAGDVRALLYAMVTMVIVIIVVDQLFWRPLVAWAQRFKVEQTA 270

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP--LSNNVKKLCRTLGVIRFHFPENFLQL 334
           G     SW+L L R+++      ++   FF P  L     +  R     R   P    ++
Sbjct: 271 GPDLPTSWMLTLLRRSHIAE---WARRVFFEPAWLWMIAGRPPRA---PRMRMPSVAKKV 324

Query: 335 CSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            S       +++ ++W  ++ G          G ++    ++++ + +  G +T+ RV  
Sbjct: 325 VSAVIWAAVFVVAVYW--IIRG----------GLMLRELGWRELFFPVLYGVLTLLRVAA 372

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +++ ++  IPVG+WIG  P  S   QP   + A+FPAN+FFPL+ +     H++     
Sbjct: 373 AVLLGALWTIPVGVWIGTHPKWSRVAQPVVLVAASFPANMFFPLITAAFLSLHVSLEWGS 432

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             LM+ GTQWYILFNVIAGASA P D +E +    + GWR WR +ILP IFP  VTG +T
Sbjct: 433 VALMMLGTQWYILFNVIAGASAIPGDLREASDLMRLGGWRRWRLLILPVIFPSLVTGLVT 492

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A GGAWNASIV+EV SW    L  TGLGAYI  +T  G +P +V G+++M  FV+A+N
Sbjct: 493 AAGGAWNASIVAEVVSWKGTQLAATGLGAYITRATTNGDWPAIVWGIVVMAAFVVAVN 550


>gi|317016935|gb|ADU86008.1| putative binding-protein-dependent transport systems inner membrane
           component [Dactylosporangium aurantiacum subsp.
           hamdenensis]
          Length = 584

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/525 (40%), Positives = 311/525 (59%), Gaps = 11/525 (2%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +   LP YA R+ LRM  A+ +S +FTF YA  AA+SRRL  +L+P LDI+QS+P+L
Sbjct: 61  IDTNPARLPYYAGRSLLRMFVALGVSTVFTFGYAYAAARSRRLEKILIPALDILQSVPVL 120

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FLT  +   + L+P   IG ELA+IFAIFTSQ WNMTFS Y SL  +PRDL+E+SRS R
Sbjct: 121 AFLTVAIGALLALFPHSFIGLELASIFAIFTSQAWNMTFSFYHSLITLPRDLDELSRSLR 180

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ W +FW + VP    GL+WN MMS  GGWFF+VASE + V +    LPG+G+Y   AI
Sbjct: 181 LTRWMRFWKIEVPNGAIGLIWNGMMSFGGGWFFLVASEAVTVANAQYTLPGVGAYAGAAI 240

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            + +L  +  A+  M  ++   +   +RPM  W+ KF+ E++       S VL   R+++
Sbjct: 241 AQGNLGHVFLAIAAMAVMVIGVNFFFWRPMTAWAEKFKQEQSEATEVQRSVVLDFLRRSH 300

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           + + +        +P    +       G + F   +  L +   +R++  + +F    + 
Sbjct: 301 WPQAL--------APARRKLAGWSARAGRV-FGTDDRPLPVSHARRLAGDV-VFAAATIA 350

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +  G+ +  + Y+        V   + LG +T  RV+VL+++ +++W+P+G+ IG  P 
Sbjct: 351 LIGWGL-YSLLRYLHGTAGLGVVAEPLLLGLLTPGRVIVLVVLTTLVWVPIGVRIGSSPR 409

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           ++   QP  Q+LA+FPAN  FPL         L+ ++   LLM  G QWYILFN IAGA 
Sbjct: 410 LARIAQPIVQILASFPANFLFPLATWLFVRTGLSIDIGGILLMGLGAQWYILFNTIAGAM 469

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P D +E   +  + GWR WR +I+P IFPYYVTG ITA GGAWNASIV+EV  +    
Sbjct: 470 AIPTDLREAMDNLGVHGWRRWRRLIIPAIFPYYVTGGITASGGAWNASIVAEVVGFAGTT 529

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           L   GLGAYIA+ST  G++P ++ G+ +M  +V+ LNR  W  LY
Sbjct: 530 LTAHGLGAYIADSTATGNYPHLIAGIAVMSLYVVGLNRLFWRRLY 574


>gi|325525200|gb|EGD03069.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 421

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/435 (46%), Positives = 271/435 (62%), Gaps = 18/435 (4%)

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I V
Sbjct: 1   QALRTVPLDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNAMMSMSGGWFFVVASEAIAV 60

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
           G+  + LPG+G+Y+A AI  +DL A+ +A++ M   I LYDQLLF P++ WS +FR    
Sbjct: 61  GNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYDQLLFGPLVAWSERFRYGDA 120

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
                + SW+L LF ++   R++G +S             +   L          F+   
Sbjct: 121 APTVASRSWMLDLFHRS---RWMGRAS-----------GPVRALLRRAARARLRGFMSAW 166

Query: 336 SNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            ++ V      D+ WF + CG      A++         T+ D+  V   G +T  RV V
Sbjct: 167 RDRIVLPPRTGDVLWFAL-CGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTV 225

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           L+ +AS+IW+P+GI IG RP ++++IQP  Q LAAFPAN+ FP+ V  +    L P++WL
Sbjct: 226 LVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRLRLEPDIWL 285

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             LMI G QWY+LFNVIAGASAFP D +E A+ F +    WWR+++LPG+ PY+VTGAIT
Sbjct: 286 CPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAIT 345

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIV+E  SWG   L   GLGAYIA  T+ G +P + LGV +M   V+A NR 
Sbjct: 346 ASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRL 405

Query: 573 LWHPLYLYGTRCLRL 587
           +W P+Y +  R  RL
Sbjct: 406 VWRPMYAFAERRTRL 420



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 56/122 (45%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P DL E +  FR+     + ++ +P  +P  V   + +  G W   
Sbjct: 295 WYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASGGAWNAS 354

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + +E +  G T +   G+G+YIA      D   I   +  M  ++   ++L++RPM  ++
Sbjct: 355 IVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWRPMYAFA 414

Query: 268 NK 269
            +
Sbjct: 415 ER 416


>gi|225872174|ref|YP_002753629.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake
           transporter (NitT) family, permease protein
           [Acidobacterium capsulatum ATCC 51196]
 gi|225793760|gb|ACO33850.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake
           transporter (NitT) family, permease protein
           [Acidobacterium capsulatum ATCC 51196]
          Length = 587

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/529 (40%), Positives = 308/529 (58%), Gaps = 9/529 (1%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA  +T+R+  A ++SL+F  VY  +AA +R L  +++  LDI+QSIP+L FL   +
Sbjct: 64  LPMYALESTVRIFVAYILSLIFAIVYGYIAAYNRWLEALMIATLDILQSIPVLSFLPGVM 123

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  M+L+P + IG EL AI  IFT +VWNM FS Y SL +IP++L E     R S WQ+ 
Sbjct: 124 LAMMSLFPNRQIGIELGAILLIFTGEVWNMAFSFYSSLKSIPKELMEACTINRFSRWQRL 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +PFS  GL+WN M+S++ GWFF++  EM  VG     LPG+GSY+  A    D++A
Sbjct: 184 IQLELPFSAIGLIWNSMVSVASGWFFLMVCEMFPVGSRNFRLPGLGSYLQTAASNGDVVA 243

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I++ +LTM+ +I L DQLL+RP+I WS+KF+ E         S +L+L R +N L+++  
Sbjct: 244 IIWGLLTMMLIIVLTDQLLWRPIIAWSDKFKFENVESAERITSPILHLIRNSNMLQYV-- 301

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            S    +P+S          G  R   P         +R S    + +  +V    +GI 
Sbjct: 302 -SRRAVTPISEAFYTRVARGGPTRRRLPAA----DETRRSSRGRTLTYALIVTAAVLGIG 356

Query: 361 WQSIGYIV--NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             +   +V     +  + L ++    +T  RV   ++IAS+  IPVG+ IGF P +++  
Sbjct: 357 TLAFHAMVLLREASTHEFLVLLGAAGMTFLRVNASLLIASLWTIPVGVAIGFHPRLANIA 416

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           QP AQ+ A+FPA   FPL+V  +    +   +    LM+ GTQWYILFNVIAGA A P+D
Sbjct: 417 QPIAQIAASFPATALFPLIVIGLMRLGMGLGIGSIALMLLGTQWYILFNVIAGAMAIPSD 476

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +EVA  F     + W  +ILPGIFPY VTG ITA GGAWNASIV+E        ++T G
Sbjct: 477 LREVAGLFRFGNLQRWTTLILPGIFPYLVTGLITASGGAWNASIVAEYFKIQGKTMQTIG 536

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGA I+ +++ G FP ++L  +IM   V+ +NR +W  LY  G    RL
Sbjct: 537 LGAQISAASDHGDFPRLLLATIIMALMVVTINRLVWRRLYHLGETRFRL 585


>gi|254375277|ref|ZP_04990757.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548]
 gi|151572995|gb|EDN38649.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548]
          Length = 574

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/574 (36%), Positives = 326/574 (56%), Gaps = 22/574 (3%)

Query: 11  ISRRIF-PNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRT 68
           I+++IF PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RT
Sbjct: 7   ITKKIFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDHSHLPYYMLRT 66

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P
Sbjct: 67  TMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFP 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S
Sbjct: 127 HSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYS 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           MPGL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + +++AI YA+ 
Sbjct: 187 MPGLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALA 244

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWN 304
            ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I   +S+  
Sbjct: 245 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIV 304

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F+  L N    L +    I    P   +++           I W+ V+    I   W   
Sbjct: 305 FW--LINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISTCI---WAG- 350

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             + + F   D  Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+
Sbjct: 351 NALWHFFPDGDKSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 410

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  
Sbjct: 411 GAAIPQPIFFPIVAVLILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTK 470

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           SFH+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++
Sbjct: 471 SFHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 530

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            +T      E  L V+ +C  V     F+W PLY
Sbjct: 531 TTTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564


>gi|118496766|ref|YP_897816.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. novicida U112]
 gi|194324074|ref|ZP_03057849.1| ABC transporter, permease protein [Francisella tularensis subsp.
           novicida FTE]
 gi|118422672|gb|ABK89062.1| ABC-type anion transport system, duplicated permease component
           [Francisella novicida U112]
 gi|194321971|gb|EDX19454.1| ABC transporter, permease protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 574

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/573 (36%), Positives = 324/573 (56%), Gaps = 23/573 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + ++ AILYA++ +
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306
           +  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I   +S+  F+
Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             L N    L +    I    P   +++       ++ + I   CV  G A+   W    
Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ 
Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  S
Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ 
Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +T      E  L V+ +C  V     F+W PLY
Sbjct: 532 TTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564


>gi|255524913|ref|ZP_05391861.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|255511391|gb|EET87683.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
          Length = 574

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/584 (36%), Positives = 340/584 (58%), Gaps = 26/584 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++R++   + D++ F++++ I+ + +  GI+       I     ++ D+ +LP Y  ++ 
Sbjct: 8   VNRKL--GVLDIIIFLVIVSILYLAIAPGIKGNVNTSGI----QVSTDIRNLPIYVLKSV 61

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            RM +A ++SL+FT +Y  +AA + +   V++PILDI+QSIP+L FL   V+  + L+P 
Sbjct: 62  GRMTAAYILSLIFTLIYGYIAAHNEKAEKVMMPILDILQSIPVLSFLPAVVLGLIALFPS 121

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             IG EL++I  IFT Q WNMTFS Y S+  +P+DLEE S  F L+ WQKF  L VPF++
Sbjct: 122 HNIGLELSSIILIFTGQAWNMTFSFYHSIKILPKDLEEASGVFGLNKWQKFKRLEVPFAV 181

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            GLVWN MMS SGGWFF++A EM  +      L GIGS++  A  + D  A+   +  ++
Sbjct: 182 IGLVWNSMMSWSGGWFFLMACEMFTLKGKDFRLEGIGSFLQTAASQGDKKALACGIAALI 241

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            VI L DQL+++P+ VW++KF++E T       S+VL L R++  + F+       + P+
Sbjct: 242 FVIVLLDQLVWKPVTVWADKFKMELTESGEAPHSFVLTLLRRSVIVDFL---VKKIYEPI 298

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYI 367
           + N+ +      + RF       +    + +     + W    ++ GV +   + +   +
Sbjct: 299 AENLNE-----AIDRFVVKLASKEKTKEKGIGIGFIVRWIVRILIYGVLLYSGFNAFKLL 353

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +   +  +   ++     +  RV    +IA I  +PVG+ IG    +++ +QP  Q++A+
Sbjct: 354 M-QLSKNEWGRILPSVGYSFLRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVAS 412

Query: 428 FPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            PA   FP+++     Y +N     N+   +LM+ GTQWYILFNVIAGA A P D K  A
Sbjct: 413 IPATALFPVIL----IYFMNKLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAA 468

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +F I GW+ W+ +ILP IFPY +TG +TA GG WNASIVSE  ++G   + T GLGA I
Sbjct: 469 KTFGINGWKRWKVLILPSIFPYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALI 528

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +E+TEKG++P +++  +IMC  V+ +N+ LW  LY+      ++
Sbjct: 529 SEATEKGNYPLLLIATIIMCVVVVGVNKTLWKRLYVLSEEKFKI 572



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 108/205 (52%), Gaps = 5/205 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR+ +A VI+L++T         ++++  VL PI+ ++ SIP        ++YFMN    
Sbjct: 373 LRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVASIPATALFPVILIYFMN---- 428

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K+ G  +A++  +     W + F++      IP DL+  +++F ++GW+++  L +P   
Sbjct: 429 KLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAAKTFGINGWKRWKVLILPSIF 488

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L+  M+ +  G W   + SE +  G   +   G+G+ I+ A ++ +   +L A + M 
Sbjct: 489 PYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALISEATEKGNYPLLLIATIIMC 548

Query: 250 GVIFLYDQLLFRPMIVWS-NKFRLE 273
            V+   ++ L++ + V S  KF++E
Sbjct: 549 VVVVGVNKTLWKRLYVLSEEKFKIE 573


>gi|298250430|ref|ZP_06974234.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548434|gb|EFH82301.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 607

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/563 (39%), Positives = 322/563 (57%), Gaps = 6/563 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+L   +V+G+I +L+        P  +   V I+L  + LP YA  + LRM+ A ++SL
Sbjct: 46  DVLIVCVVLGLIALLVVAASRWVAP--LTPKVSISLAPNMLPAYAGYSMLRMMLAYILSL 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FT  Y   AA   R G+V+VP+LDI+QSIP+L FL   V+  +  +P   IG ELA++ 
Sbjct: 104 IFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVAAFPHSNIGLELASVL 163

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFT Q WNMTFS Y S   +P+DL+E S    L  WQ+F  L VP SM GL+WN MMS 
Sbjct: 164 LIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEVPSSMIGLIWNSMMSW 223

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++ASE  V+GD    LPG+GSY+  A    D +A+   + T++ +I L +   +
Sbjct: 224 AGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGLGTLIVLIILINFFFW 283

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KF+LE  +   P  S VL L R +  +  I       F PL + +  L   L
Sbjct: 284 RPLVAWADKFKLELGSEADPPTSPVLSLLRHSALVAGI---QARIFRPLGDLLAGLLNRL 340

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +     E  L          +L++FW   + GV +G    ++  ++ H ++     + 
Sbjct: 341 QPLPSVQQERMLTRKKGLDAGRLLNVFWLLCLLGV-VGWGLWNMVVLLAHISFAGWGRLF 399

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T  R +  ++I     +P+G+ IG  P  S ++QP  Q++A+ PA  FFP+++  
Sbjct: 400 IAAGATWLRTLAALLIGVAWTLPLGVAIGLSPRWSKRLQPVVQVVASIPATAFFPILLPL 459

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       +L   +LM+ GTQWY+LFNVIAGA A PND KE A+++ +TGWR WR +ILP
Sbjct: 460 LVSLPGGLSLAAIVLMLLGTQWYVLFNVIAGAMAIPNDLKEAATTYQVTGWRRWRVLILP 519

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           GIFPY VTG +TA GGAWNASIVSE   +    ++T GLGA IA +    +F  ++   L
Sbjct: 520 GIFPYLVTGLLTASGGAWNASIVSEYVQFNAHTVQTVGLGAEIAAAATANNFALLLAATL 579

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
           +M  FV+ +NR LW  LY    R
Sbjct: 580 LMAAFVVVINRLLWKRLYALAER 602


>gi|157827293|ref|YP_001496357.1| ABC-type anion transport system permease component [Rickettsia
           bellii OSU 85-389]
 gi|157802597|gb|ABV79320.1| ABC-type anion transport system permease component [Rickettsia
           bellii OSU 85-389]
          Length = 422

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/432 (46%), Positives = 271/432 (62%), Gaps = 24/432 (5%)

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+ FS YQSL  IP DL E S  F+LS  +KF  L +PF+  GL+WN MMSMSGGWFF+V
Sbjct: 3   NIAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFFLV 62

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           ASE +V+G   I +PGIGSYIA AI E+D+++I+Y+++TM  VI LYDQ++FRP+IVW++
Sbjct: 63  ASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVWAD 122

Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFP 328
           KFR E         S V+ LF+KTNF+             ++  +  L   L +I     
Sbjct: 123 KFRYENIVKACAPKSMVVDLFKKTNFITIY----------IAKIISNLLSKLYIIFIKPI 172

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            N L           + I W+  +  +AI  A +   ++    +  + L VI LG  T+ 
Sbjct: 173 PNLL-----------IAIIWYGCLACLAIYAANKCYDFVKTTISLSEFLLVIKLGFFTLL 221

Query: 389 RVVVLIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           RV+ ++I+A IIW       WI    + + K+ P  Q+ +AFPAN  FP VV  +S+Y+L
Sbjct: 222 RVITMVILALIIWGAYRCIYWIKNSSY-TEKMMPVIQIASAFPANFLFPFVVIFISHYNL 280

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           NPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ IILPGIFP+ 
Sbjct: 281 NPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIILPGIFPHI 340

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           VTG ITA GGAWNASIV+E+ SWG++ +  TGLG YI  +     +  V +GV++M  +V
Sbjct: 341 VTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIGVVVMSLYV 400

Query: 567 LALNRFLWHPLY 578
           + ++R +W PLY
Sbjct: 401 IVISRLVWRPLY 412



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 9/199 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA-AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-- 124
           T LR+++ ++++L+    Y  +   K+      ++P++ I  + P      F V++    
Sbjct: 219 TLLRVITMVILALIIWGAYRCIYWIKNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHY 278

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL P       +A  F +     W + F++       P DL+E +  FR+ GW  +  + 
Sbjct: 279 NLNP------NIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNII 332

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P   P +V  ++ +  G W   + +E++  G+  I   G+G YI  A    D   +   
Sbjct: 333 LPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIG 392

Query: 245 MLTMLGVIFLYDQLLFRPM 263
           ++ M   + +  +L++RP+
Sbjct: 393 VVVMSLYVIVISRLVWRPL 411



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/120 (19%), Positives = 54/120 (45%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I F+        PND  E ++ F ++  + +  + LP      +  ++ +  G W   + 
Sbjct: 4   IAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFFLVA 63

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           SE    G   +   G+G+YIA++  +     ++  V+ M   ++  ++ ++ PL ++  +
Sbjct: 64  SETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVWADK 123


>gi|206891166|ref|YP_002247994.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206743104|gb|ACI22161.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 570

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/559 (38%), Positives = 335/559 (59%), Gaps = 15/559 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+  F +V+GI++ +++   E   P +    V I L+  ++PQYA ++  R+  A ++SL
Sbjct: 18  DIAVFFIVLGILSFIIYIASEWGTPYE--RTVEINLNPSNIPQYAIQSLARIFFAYILSL 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            F+  Y   A++S+    +++P+LDI+QSIP+L FL   V+  + L+PGK IG ELA I 
Sbjct: 76  TFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKRIGLELACIL 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFT QVWNMTFS Y S+  IP+++ EV + F+ + + KF  L +PFS  GL+WN MMS+
Sbjct: 136 LIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIGLIWNSMMSV 195

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++A EM ++ D    LPGIGSYI  A  E ++  ++Y + TM+ +I + D  ++
Sbjct: 196 AGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILLIIILDLFIW 255

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP+IVWS KFR+E        +S+VL LF  + F++ +          L NN       L
Sbjct: 256 RPLIVWSQKFRIETIPPEEERESFVLNLFSGSIFIKKV--------VDLLNNTINKVEKL 307

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              +F    N +      R+S ++ I    ++  V I    ++ G +V++ ++ D++ +I
Sbjct: 308 SYRKFSLSGNPVV----NRLSKIMGIISLIIILLVIIWAILKAAG-LVSNISFNDIITII 362

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV V ++IA +  +PVG++IG  P  +  +Q   Q+ A+ PA   FP+++  
Sbjct: 363 KAAFYSLLRVFVALLIALVWTLPVGVYIGLNPRAAKILQSIVQIAASVPATAVFPVILLF 422

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       ++    LM+ GTQWY+LFN+IAGASA P D  E++ ++ + G R W+ +ILP
Sbjct: 423 LIKLGGGLDIGAIFLMLLGTQWYLLFNIIAGASAIPKDLIEISRAYGVKGIRKWKTLILP 482

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           GIFPY VTG ITA GGAWNA+IVSE  S+G   + T GLGA I++S+  G+F  ++L   
Sbjct: 483 GIFPYLVTGLITASGGAWNATIVSEYVSFGGEIMHTAGLGALISQSSASGNFGLLLLSTC 542

Query: 561 IMCCFVLALNRFLWHPLYL 579
            M   V+ +NR LW  L++
Sbjct: 543 FMSLTVVGINRLLWKRLFI 561



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 8/198 (4%)

Query: 394 IIIASIIWIPVGIWIGF---RPHISSKIQ-PFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           I  A I+ +   IW G+   R  I  KI  P   +L + P   F P VV  +        
Sbjct: 67  IFFAYILSLTFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKR 126

Query: 450 LWLSL---LMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           + L L   L+IF G  W + F+     S  P + +EV   F    +  +  + LP     
Sbjct: 127 IGLELACILLIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIG 186

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +  ++ +  G W   +  E+        R  G+G+YI  +  +G+   V+ G+  M   
Sbjct: 187 LIWNSMMSVAGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILL 246

Query: 566 VLALNRFLWHPLYLYGTR 583
           ++ L+ F+W PL ++  +
Sbjct: 247 IIILDLFIWRPLIVWSQK 264


>gi|320107387|ref|YP_004182977.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
 gi|319925908|gb|ADV82983.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
          Length = 589

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/571 (37%), Positives = 329/571 (57%), Gaps = 21/571 (3%)

Query: 13  RRIFPNIFDLLAFVLVI----GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           RR +P + DLL   + +    G++ I    +     P  I+ + P      +LP+YA  +
Sbjct: 24  RRTWPVMLDLLVAAIGLACFYGVVRIATMWMAHAQ-PDVIISLAP-----SALPRYAFFS 77

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +RM  A  +SL F   Y  +AA SRRL  +++  LDI+QSIP+L FL   ++  + L+P
Sbjct: 78  MVRMALAYFLSLAFAIGYGYVAAYSRRLEALMIAGLDILQSIPVLSFLPGVMLAMVALFP 137

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            + IG EL AI  IFT Q WN+ FS Y SL +IP++L+E +  +  S WQ+ W L +P++
Sbjct: 138 SRQIGVELGAIILIFTGQAWNIAFSFYASLKSIPKELDEAATLYGFSRWQRLWQLELPYA 197

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
             GL+WN M+S++GGWFF++A EM V+G     LPG+GSY+  A    +  A+L+ + TM
Sbjct: 198 AIGLIWNSMVSVAGGWFFLMACEMFVLGPRDFRLPGLGSYLQTAASRGNFPAMLWGIATM 257

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           +G++ L DQL++RP+I WS++F+ E+        S +L+  + +   R +   S     P
Sbjct: 258 IGIVVLTDQLVWRPLIAWSDRFKFEQVESKSHVRSPLLHALQHSTAFRSV---SKKIIRP 314

Query: 309 LSNNVKKLCRTLGVIR-FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           L+   +K+ R     R  H   + ++  +  RV  +  I +  ++CGV    A  +I  +
Sbjct: 315 LN---EKIYRHFAATRTTHIEYDAVKRGAPSRV--LRAIVFIALLCGVGYS-AVHAID-L 367

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     Q  L ++     T  RV + +++AS+  IPVG+ IGF P ++   QP AQ+ A+
Sbjct: 368 LRSVELQQFLTILRGAAATFLRVNIALVLASLWTIPVGVAIGFNPRLARIAQPVAQIAAS 427

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA   FP+++  +  +     L   LLM+ GTQWYILFNVIAGA A P D  EVA+ F 
Sbjct: 428 VPATALFPILLLALVRFRGGMGLAAILLMLLGTQWYILFNVIAGAMAIPTDLLEVATLFR 487

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  + W+ +ILPGIFPY +TG +TA GGAWNASIV+E        L+T GLG  I+ +T
Sbjct: 488 FSRIQKWKTVILPGIFPYLITGLLTASGGAWNASIVAEYFRLHDQTLKTFGLGEQISSAT 547

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           + G F  ++L  ++M   V+ +NR +W PL+
Sbjct: 548 DSGQFQLLLLATIVMALMVVTMNRLVWRPLF 578



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 423 QLLAAFPANVFFPLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            +L + P   F P V    V+      +   L   +L+  G  W I F+  A   + P +
Sbjct: 114 DILQSIPVLSFLPGVMLAMVALFPSRQIGVELGAIILIFTGQAWNIAFSFYASLKSIPKE 173

Query: 479 FKEVASSFHITGW-RWWRYIILPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIH 533
             E A+ +  + W R W+  +     PY   G    ++ +  G W   +  E+   G   
Sbjct: 174 LDEAATLYGFSRWQRLWQLEL-----PYAAIGLIWNSMVSVAGGWFFLMACEMFVLGPRD 228

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            R  GLG+Y+  +  +G+FP ++ G+  M   V+  ++ +W PL  +  R
Sbjct: 229 FRLPGLGSYLQTAASRGNFPAMLWGIATMIGIVVLTDQLVWRPLIAWSDR 278


>gi|208779963|ref|ZP_03247306.1| ABC transporter, permease protein [Francisella novicida FTG]
 gi|208743967|gb|EDZ90268.1| ABC transporter, permease protein [Francisella novicida FTG]
          Length = 574

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/573 (36%), Positives = 323/573 (56%), Gaps = 23/573 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + ++ AILYA+  +
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALAAI 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306
           +  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I   +S+  F+
Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             L N    L +    I    P   +++       ++ + I   CV  G A+   W    
Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ 
Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  S
Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ 
Sbjct: 472 FHLKGWKWWLKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +T      E  L V+ +C  V     F+W PLY
Sbjct: 532 TTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564


>gi|299136998|ref|ZP_07030181.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298601513|gb|EFI57668.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 590

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/530 (39%), Positives = 312/530 (58%), Gaps = 18/530 (3%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L   +LP YA  + +R+  A ++SLLF   Y  +AA SRRL  ++V  LDI QSIP+L
Sbjct: 63  ISLSPRALPLYAFYSIVRIGLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVL 122

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   ++  + L+P + IG E+ AI  IFT +VWNM FS Y S+ +IPR+L E +  +R
Sbjct: 123 SFLPGVMLAMVALFPTRQIGVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYR 182

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S WQ+ W L +P+   GLVWN M+S++GGWFF++A EM V+G     LPG+GSY+  A 
Sbjct: 183 FSRWQRLWQLELPYGAIGLVWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAA 242

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            E D  AI+  +  M+G+I   DQL++RP IVWS+KF+ E+  G     S +L+L   + 
Sbjct: 243 SENDTRAIVMGLAVMIGIIVAIDQLIWRPAIVWSDKFKFEQVEGGAHVRSPLLHLLTHSG 302

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF---- 349
            LR +   +     P+S N+   C +L   R    E  L L     V+      WF    
Sbjct: 303 ALRTLRRHT---LDPVSENI--YC-SLAQRR----ERRLSLADG--VTEKKGSAWFRWVA 350

Query: 350 -CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             ++    I +A +++  ++       ++ V+     T  RV + ++IA+   IPVG+ I
Sbjct: 351 VLLLLVAVIYLASEAL-ILLRQVRAPQLVAVLHGAAATFLRVNIALVIAAAWTIPVGVAI 409

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           GF P ++   QP AQ+ A+ PA   FP+++  +        +   LLM+ GTQWYILFNV
Sbjct: 410 GFNPKLARLAQPLAQIAASVPATALFPVILLALIRVGGGMGIASILLMLIGTQWYILFNV 469

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGA A P+D +EVA  FH +  + WR +ILPGIFP+ +TG +TA GGAWNASI++E   
Sbjct: 470 IAGAMAIPSDLREVAQLFHFSTLQRWRTVILPGIFPFLITGMVTASGGAWNASIIAEYFH 529

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             +  ++T GLGA I+ +T+ G F  ++L  ++M   V+ +NR +W PLY
Sbjct: 530 LNNQTMQTVGLGAQISSATDHGEFHLLLLSTIVMALMVVTINRLVWRPLY 579



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 18/209 (8%)

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA----QLLAAFPANVFFPLV----VS 439
           F  +V I +A I+ +   +  G+    S +++P       +  + P   F P V    V+
Sbjct: 75  FYSIVRIGLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVLSFLPGVMLAMVA 134

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
                 +   +   LL+  G  W + F+  +   + P +  E A+ +  + W R W+  +
Sbjct: 135 LFPTRQIGVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYRFSRWQRLWQLEL 194

Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                PY   G    ++ +  G W   +  E+   G    R  GLG+Y+  +  +     
Sbjct: 195 -----PYGAIGLVWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAASENDTRA 249

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +V+G+ +M   ++A+++ +W P  ++  +
Sbjct: 250 IVMGLAVMIGIIVAIDQLIWRPAIVWSDK 278


>gi|22299940|ref|NP_683187.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
 gi|22296125|dbj|BAC09949.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
          Length = 574

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 200/529 (37%), Positives = 310/529 (58%), Gaps = 15/529 (2%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           + I L    LP Y ++T LRML A +ISL+F+ +Y+ +A  +R    +L+P+LDI+QSIP
Sbjct: 49  ITIELSPAVLPSYTAQTLLRMLIAYMISLVFSILYSYIAYYNRTAEKILLPLLDILQSIP 108

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +L FL   V+  + L+PG  +G ELAAI  I+T   WNMTFS YQSL ++P++L EV++ 
Sbjct: 109 VLSFLPGVVLALIALFPGSRMGVELAAIILIYTGMAWNMTFSFYQSLISVPQELREVAKI 168

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           +RL  WQ+ W L +P    GL+WN +MS++GGWFF++A E   +G+    LPG+GSY+A 
Sbjct: 169 YRLGWWQRVWTLDLPAGAIGLIWNSVMSVAGGWFFLMAIESFTIGEKTFTLPGLGSYLAT 228

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           A  EQD  A++Y +  ++GVI   D L++RP+I W  KF++E         S++L   R+
Sbjct: 229 AANEQDYAALIYGLAVLIGVIITIDILVWRPLIAWGEKFKMEMVEAENVPKSFLLDFLRR 288

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           +  LR         F+P+   + +  R     +   P N      + R++ ++      +
Sbjct: 289 SPTLRAFHQ---QIFAPVWERLDEQLRPKHPRQSLAPRNG---QGHWRITPII-----LL 337

Query: 352 VCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
           +  V +G  W +I ++   F  ++Q    +     +T  RV+  ++++ +  +PVG+ IG
Sbjct: 338 ISAVVVG--WGAIAFVQQMFKVSWQQWQQITLGAVLTTLRVMTALLLSLLWTVPVGVAIG 395

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P  +  +QP  Q+ A+ PA   FP+++  ++       +    LM+ GT WYILFNVI
Sbjct: 396 RNPRAAQVLQPIVQIAASVPATALFPVLLLALANVGGGLEIGSVALMMLGTMWYILFNVI 455

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGA A P +  E A  + +  W+ WR +ILPGIFPY +TG ITA GGAWNASIVSE   +
Sbjct: 456 AGAQAIPTELFEAAVVYQLPWWQRWRTLILPGIFPYLMTGIITAVGGAWNASIVSEYVEF 515

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            +   +T GLGA I+E++ +G FP ++    +M   V+  NR +W PLY
Sbjct: 516 QNQTEQTLGLGALISEASVRGDFPLLMAATAVMSLLVVLTNRLVWRPLY 564



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/182 (19%), Positives = 81/182 (44%), Gaps = 5/182 (2%)

Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQ 461
           +I +    + KI  P   +L + P   F P +V++ ++ +    +   L   +L+  G  
Sbjct: 85  YIAYYNRTAEKILLPLLDILQSIPVLSFLPGVVLALIALFPGSRMGVELAAIILIYTGMA 144

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W + F+      + P + +EVA  + +  W+    + LP      +  ++ +  G W   
Sbjct: 145 WNMTFSFYQSLISVPQELREVAKIYRLGWWQRVWTLDLPAGAIGLIWNSVMSVAGGWFFL 204

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           +  E  + G       GLG+Y+A +  +  +  ++ G+ ++   ++ ++  +W PL  +G
Sbjct: 205 MAIESFTIGEKTFTLPGLGSYLATAANEQDYAALIYGLAVLIGVIITIDILVWRPLIAWG 264

Query: 582 TR 583
            +
Sbjct: 265 EK 266


>gi|148658669|ref|YP_001278874.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148570779|gb|ABQ92924.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 581

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 214/565 (37%), Positives = 322/565 (56%), Gaps = 19/565 (3%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ I+ +L  GI         V    I+L + +LP YA  +  RM +A  +SL FT +
Sbjct: 32  IIVLIIVGLLALGIWLAEAAPAEVRGPEISLSITALPFYAFHSVGRMAAAYALSLGFTLI 91

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           Y  +AA + R   VL+P+LD++QS+PIL FL   ++ F  + P + I  ELA+I  IFTS
Sbjct: 92  YGYVAAYNPRAERVLMPLLDVLQSVPILSFLPVVLLSFTAILP-EGIAVELASIVLIFTS 150

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           QVWNMTF+ YQSL  +PR+L E S  FR + W++   L +PF    L+WN MMS +GGWF
Sbjct: 151 QVWNMTFAWYQSLTTVPRELREASSIFRFTRWRRLTTLELPFGALALIWNSMMSWAGGWF 210

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           F++A+E+  +G     LPG+G+Y+  A   ++L AI Y + T++ VI L DQL++RP++V
Sbjct: 211 FLMAAEIFTLGARDFRLPGLGAYLQTAANAENLPAIGYGIATLIVVIVLLDQLIWRPLLV 270

Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL-CRTLGVIR 324
           W+++F+LE      P  SW   L +       IG       +P+   +  L  R L + R
Sbjct: 271 WADRFKLEMVESDNPPQSWFYDLLQHATLKDVIG----GVVAPVGRTLDALFDRLLPLPR 326

Query: 325 FHFPENFLQLCSNQRVSYM-LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-IWL 382
               +      S  R+ ++ L +     V G  +G      G ++   + +  L + I L
Sbjct: 327 ATSGDT----NSGFRIGWLFLALIGAAAVAGTLLG------GRMLIQVSPEQWLGIGIGL 376

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G  T  RVV  + IA I  +P+G++IG +P  ++ +QP  Q++A+ PA   FP++V  + 
Sbjct: 377 GA-TFLRVVAALAIALIWTVPLGVYIGMQPRAAAVLQPIIQIVASVPATALFPVLVLALL 435

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 N+   LLM+ GTQWY+LFNVIAGASA P D +       ++GW+ WR +ILP +
Sbjct: 436 SIPGGLNIAAVLLMLLGTQWYVLFNVIAGASAIPQDLRYTTDLLQLSGWQRWRTLILPAL 495

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FPY +TG ITA GGAWNASIV+E   +G    ++TG+GA I  +T  G +P ++   L M
Sbjct: 496 FPYLITGMITASGGAWNASIVAEFVVFGGQTYQSTGVGAQITSATADGDYPRLLAATLAM 555

Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587
              V+A+NR +W  LY       R+
Sbjct: 556 VITVVAINRLVWRRLYRLAETVYRM 580


>gi|312797025|ref|YP_004029947.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454]
 gi|312168800|emb|CBW75803.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 407

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 188/380 (49%), Positives = 256/380 (67%), Gaps = 8/380 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IG+I +   G ++T  P   +    I+LD   LP+YA RTTLRML
Sbjct: 23  RLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPEYALRTTLRML 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ + +FT  Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+P +V G
Sbjct: 83  AAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFFIALFPTRVAG 142

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AE AAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 143 AECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLI 202

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPG+G+Y+A AI E++L AI + +LTM  VI 
Sbjct: 203 WNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVIL 262

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T       SW+L L R+T  +            P     
Sbjct: 263 AYDQLLFRPLVAWADKFRMENTASASAPQSWLLDLVRRTRLIH-------QLLVPAGWLF 315

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++ R L +     P     +  +++ S + D+ W  +V    + + W+ IGY+    T+
Sbjct: 316 ARMAR-LPLRWRKLPLVGPAVGPHRKPSRLGDLAWGGLVLAGTVYLLWRVIGYVSTGVTW 374

Query: 374 QDVLYVIWLGCITMFRVVVL 393
            +V +V+ +GCIT+ RV+VL
Sbjct: 375 DEVWHVLAMGCITLARVLVL 394



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P D  EV+  FH+TGW R+W+ + +P   P  +   
Sbjct: 147 AIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWK-LEVPFSMPGLIWNM 205

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +  G W   + SE  + G+  +   G+GAY+A++  + + P +   +L M   +LA +
Sbjct: 206 MMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVILAYD 265

Query: 571 RFLWHPLYLYGTR 583
           + L+ PL  +  +
Sbjct: 266 QLLFRPLVAWADK 278


>gi|156740188|ref|YP_001430317.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156231516|gb|ABU56299.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 574

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 213/584 (36%), Positives = 334/584 (57%), Gaps = 23/584 (3%)

Query: 12  SRRIF-PNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQY 64
           +RR+F P+  D   F +  G+I +++ G+         + P ++     I+L + +LP Y
Sbjct: 5   TRRVFTPSPPDRPRFTVADGVILLIIVGLLALGIWAAESAPAEVRG-PEISLSISALPFY 63

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  +  RM +A V+SL+FT +Y  +AA + R   VL+P+LD++QS+PIL FL   ++   
Sbjct: 64  ALHSVGRMAAAYVLSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLSLT 123

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            + P + I  ELA+I  IFTSQVWNMTF+ YQSL  +PR+L E S  FR + W++   L 
Sbjct: 124 AILP-EGIAVELASIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVLE 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PF    L+WN MMS +GGWFF++A+E+  +G     LPG+G+Y+  A  E++L AI Y 
Sbjct: 183 LPFGALALIWNSMMSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGYG 242

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           + T++ VI L DQL++RP++VW+++F+LE      P  SW   L ++      +  +   
Sbjct: 243 IATLVVVIVLLDQLVWRPLLVWADRFKLEMVESDNPPQSWFYDLVQRAALNNAVAGA--- 299

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P+      L   L       P + L   +N+R S    +F   +V  +A G+ +   
Sbjct: 300 -VAPIGRVFDALMDRL----LPLPRS-LNAETNRRFSVGWLVFAAIIVAALA-GVLFG-- 350

Query: 365 GYIVNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           G ++   +    + + I +G  T  RVV  + IA +   P+G++IG +P  ++ +QP  Q
Sbjct: 351 GRLLLQVSLDQWIDIGIGIGA-TFLRVVAALTIALLWTAPLGVYIGTQPRAAAVLQPIVQ 409

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++A+ PA   FP++V  +       N+   LLM+ GTQWY+LFNVIAGA+A P D +   
Sbjct: 410 IVASIPATALFPVLVLALLAVPGGLNVAAVLLMLLGTQWYLLFNVIAGAAAIPQDLRYTT 469

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++GW+ WR +ILP +FPY +TG ITA GGAWNASIV+E   +G    ++ G+GA I
Sbjct: 470 DLLQLSGWQRWRTLILPALFPYLITGMITASGGAWNASIVAEYVVFGGQAYQSIGVGAQI 529

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             +T  G +P ++   L M   V+A+NR +W  LY       R+
Sbjct: 530 TSATADGDYPRLLAATLAMVVTVVAINRLVWRRLYRLAENVYRM 573


>gi|90577269|ref|ZP_01233080.1| hypothetical protein VAS14_09499 [Vibrio angustum S14]
 gi|90440355|gb|EAS65535.1| hypothetical protein VAS14_09499 [Vibrio angustum S14]
          Length = 574

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 189/535 (35%), Positives = 308/535 (57%), Gaps = 23/535 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
            +  LP    RTT+R++  M  S +F       AAK++ L  +++P ++IM+S+P+LGF+
Sbjct: 58  SLSQLPYDMLRTTMRLVIGMFFSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFI 117

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           TF+ + F+NL+P  V+G E AAIF +FT Q WNM   +YQ+L  +P++++E ++ F LS 
Sbjct: 118 TFSTIIFINLFPNSVMGLEAAAIFGVFTGQAWNMALVVYQTLRIVPKEIQEAAQLFNLSP 177

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQKFW +  P+++PGL+WN M+S S  WF +VA+E+I +    +PL G+G++I +A+   
Sbjct: 178 WQKFWRVEFPYTIPGLIWNAMVSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNA 237

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
           D+  I++A+L ++  I ++DQL FRP++ WS KF+ E         SW   +   T  L+
Sbjct: 238 DVKMIIWAVLAIIINIMVFDQLFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLK 297

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVV 352
            I         P+ N  +        I  +    +L   S+  +   L +F    W+ +V
Sbjct: 298 RI-------IRPIKNTAE--------IFVNGGRRYLPARSSYALPKTLKLFSVISWYAIV 342

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                  +++   Y+  +    ++L ++ L   T  RV+  ++++ +I +PVG+WIG  P
Sbjct: 343 LYFCTTWSYELWHYVPKN----EILSMVPLMAKTTLRVLAAMLLSLVIGVPVGVWIGLSP 398

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +   QP  Q+ +A P N+FFPLV   +   + + NLW   L++ GT WY+LFNVIAG 
Sbjct: 399 KATRIAQPIIQIGSALPPNIFFPLVTIALMATNTSLNLWTIPLIMMGTTWYVLFNVIAGV 458

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E+A  F +TG  WW   +LP IFPY +TG I+A GGAWN++I +E+  WG  
Sbjct: 459 TTLPQEMIELAKLFKLTGRTWWLRFMLPAIFPYILTGVISAAGGAWNSAICAELLQWGVS 518

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + T+GLG YI+++T   + P+  LG + M   V     F+W+PLY    R  ++
Sbjct: 519 TVHTSGLGFYISKATIDNALPQAALGCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573


>gi|206900627|ref|YP_002250486.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12]
 gi|206739730|gb|ACI18788.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12]
          Length = 570

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 206/549 (37%), Positives = 317/549 (57%), Gaps = 20/549 (3%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T+     +++ + L    LP Y+  + LRM+ A  ISL+FT VYA  AA  + L  +L+
Sbjct: 36  NTIYSKPTEVISLDLSPQKLPLYSLFSLLRMILAYFISLIFTIVYAYTAAYKKSLEKILI 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+LDI+QSIP+L FL    +  ++++PG  +G E+ +I  IFT QVWNM FS YQSL +I
Sbjct: 96  PLLDILQSIPVLSFLPPVFMAVISMFPGSKLGLEITSIILIFTGQVWNMVFSFYQSLISI 155

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PRDL+E ++ F+L+ WQ+FWYL +P+S  GL+WN MMS +GGWFF++A EM  + +    
Sbjct: 156 PRDLKEAAQLFKLNPWQRFWYLELPYSAIGLIWNSMMSWAGGWFFLMACEMFTLTNQNFV 215

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           LPG+GSY++ A  + DLL I Y +  ++ VI L DQL++RP++ WS KF++E        
Sbjct: 216 LPGLGSYLSFAALKGDLLKIFYGLFALITVIILLDQLVWRPLLSWSQKFKVEYVQAEEYY 275

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
           +S VL  +R++   R           PL   ++ L  +      ++ +   Q     ++S
Sbjct: 276 ESKVLLWYRRS---RIFDLLYKKIILPLRERLEILFIS------YYDKKEKQEIKTSKIS 326

Query: 342 YMLD-----IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            +L+     I  F V+ G  IG+    I   +N   ++D++Y  +L   T+ RV   ++I
Sbjct: 327 KLLNLIVSTILIFLVLRGF-IGLLKLIINLPLNM--WKDIIYSAFL---TLLRVTTAVLI 380

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A    +P+G+ IG  P +S  IQP  Q++A+ PA   FP++V  +       N+   +LM
Sbjct: 381 ALSWTLPLGVRIGMNPKLSKVIQPIVQIVASVPATAIFPVIVMYLINLPGGLNIASIVLM 440

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + GTQWY+LFN+IAG  + PND  EV+    ++    W+ +I+P I P+ VTG ITA GG
Sbjct: 441 LLGTQWYLLFNIIAGGMSIPNDLIEVSELLKLSKIDKWKILIIPSILPFLVTGGITAMGG 500

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           A+NASIVSE   + +   +  GLGA I E++ KG+   +    L+M   V+ +NR  W  
Sbjct: 501 AFNASIVSEYIEFHNQIYKIKGLGALITEASSKGNNSLLAASTLVMALIVVTINRLFWKR 560

Query: 577 LYLYGTRCL 585
           L+      L
Sbjct: 561 LFKKSEELL 569


>gi|89072382|ref|ZP_01158961.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34]
 gi|89051914|gb|EAR57366.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34]
          Length = 574

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 193/536 (36%), Positives = 308/536 (57%), Gaps = 21/536 (3%)

Query: 57  DVH----SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           +VH     LP    RTT+R++  M  S +F       AAK++ L  +++P ++IM+S+P+
Sbjct: 54  EVHGALSQLPYDMLRTTMRLVIGMFFSFIFAITAGVAAAKNKHLERIILPFINIMESVPL 113

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           LGF+TF+ + F+NL+P  V+G E A+IF +FT Q WNM   +YQ+L  +P++L+E ++ F
Sbjct: 114 LGFITFSTIIFINLFPNSVMGLEAASIFGVFTGQAWNMALVVYQTLRIVPQELQEAAQLF 173

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            LS WQKFW +  P+++PGL+WN M+S S  WF +VA+E+I +    +PL G+G++I +A
Sbjct: 174 NLSPWQKFWRVEFPYTIPGLIWNAMVSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIA 233

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
           +   D+  I++A+L ++  I ++DQL FRP++ WS KF+ E         SW   +   T
Sbjct: 234 LNNADVKMIIWAVLAIIINIMVFDQLFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDT 293

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             L+ I     N      N  ++        R+  P+  L+L S   +S+   + +FC  
Sbjct: 294 LLLKRIIRPIKNTAEVFVNGGRRYLSNRK--RYALPKT-LRLFS--VISWYAIVLYFCTT 348

Query: 353 CGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                   W    Y + H+    ++L ++ L   T  RV+  ++++ +I +P G+WIG  
Sbjct: 349 --------W---SYELWHYVPKNEILSMVPLMAKTTLRVLAAMLLSLVIGVPAGVWIGLS 397

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  +   QP  Q+ +A P N+FFPLV   +     + NLW   L++ GT WY+LFNVIAG
Sbjct: 398 PRATRIAQPIIQIGSALPPNIFFPLVTIALMATSTSLNLWTIPLIMMGTTWYVLFNVIAG 457

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +  P +  E+A  F +TG  WW   +LP IFPY +TG I+A GGAWN++I +E+  WG 
Sbjct: 458 VTTLPQEMIELAKLFKLTGRTWWLRFMLPAIFPYILTGVISAAGGAWNSAICAELLQWGV 517

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             + T+GLG YI+++T   + P+  LG + M   V     F+W+PLY    R  ++
Sbjct: 518 STVHTSGLGFYISKATIDNALPQAALGCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573


>gi|241667474|ref|ZP_04755052.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254876021|ref|ZP_05248731.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842042|gb|EET20456.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 574

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 208/573 (36%), Positives = 324/573 (56%), Gaps = 23/573 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + ++ AILYA++ +
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306
           +  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I   +S+  F+
Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             L N    L +    I    P   +++      +++ + I   CV  G A+   W    
Sbjct: 307 --LINGASFLNKK---INLKSPIRDIKILKKLSCIAWYIVIISACVWAGNAL---WH--- 355

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ 
Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  S
Sbjct: 412 AAIPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKS 471

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ 
Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +T      E  L V+ +C  V     F+W PLY
Sbjct: 532 TTGNNQLHEAALAVVALCSLVALCVIFIWKPLY 564


>gi|186685736|ref|YP_001868932.1| binding-protein-dependent transporters inner membrane component
           [Nostoc punctiforme PCC 73102]
 gi|186468188|gb|ACC83989.1| binding-protein-dependent transport systems inner membrane
           component [Nostoc punctiforme PCC 73102]
          Length = 579

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 201/528 (38%), Positives = 314/528 (59%), Gaps = 14/528 (2%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+ ++++LP Y ++T +RM  A   SL+FT +YA  A +SR    +L+P+LDI+QSIP+L
Sbjct: 52  ISTNINALPGYTAQTLIRMGLAYFFSLIFTLLYAYTAYRSRIAERILIPMLDILQSIPVL 111

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   V+  ++L+PG+ IG ELAAI  IFT   WNMTFS YQSL +IP++L E SR +R
Sbjct: 112 SFLPGVVLALISLFPGQRIGVELAAILLIFTGMTWNMTFSFYQSLQSIPQELLETSRVYR 171

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ WQ+FW L +P  + GLVWN +MS++GGWFF++A E   +G+    LPG+GS++  A 
Sbjct: 172 LNPWQRFWTLELPSGVIGLVWNSVMSVAGGWFFLIAIESFTLGNQDFRLPGLGSFLGTAA 231

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            + D  AI + ++ ++ +I   D  ++RP+I W+ +F+LE         SW+L  FR++ 
Sbjct: 232 NKGDFKAIFWGLVLLIAIIVATDFFVWRPLIAWAERFKLEMIETENAPQSWILDTFRRSP 291

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            LR I   S   F PL   +        +IR  FP   + + +   ++    + W   V 
Sbjct: 292 TLRAI---SDRVFQPLQTVLDD-----SLIR-SFPVRSVPINAKGNLNLPSFLNW-IFVS 341

Query: 354 GVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           G ++ +    W+++  ++    + D   VI    +T  RV++ +I++ +  +PVG+ IG 
Sbjct: 342 GFSLIVLWGTWEAV-LLLRTLGWDDWQQVIKGAMLTALRVIIALILSLLWTVPVGVAIGR 400

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              ++  +QP  Q+ A+ PA   FP+++  ++       +    LM+ GT WYILFNVIA
Sbjct: 401 NRRLAQVLQPLVQIAASVPATALFPVLLLGLTRIAGGLQIGAIALMMLGTMWYILFNVIA 460

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA + P+D  E AS + ++  + WR +ILP IFPY +TG I+A GGAWNASIVSE  ++ 
Sbjct: 461 GAQSIPSDLIEAASVYKLSRLQRWRTLILPAIFPYLITGIISAVGGAWNASIVSEYVTFQ 520

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
              + T+GLGA I+ +T  G+F  ++    IM   V+  N  +W PLY
Sbjct: 521 GRVISTSGLGATISYATATGNFSLLLASTAIMSLLVVLTNHLVWRPLY 568



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 409 GFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQWY 463
            +R  I+ +I  P   +L + P   F P +V++ +S +    +   L   LL+  G  W 
Sbjct: 88  AYRSRIAERILIPMLDILQSIPVLSFLPGVVLALISLFPGQRIGVELAAILLIFTGMTWN 147

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           + F+      + P +  E +  + +  W+ +  + LP      V  ++ +  G W   I 
Sbjct: 148 MTFSFYQSLQSIPQELLETSRVYRLNPWQRFWTLELPSGVIGLVWNSVMSVAGGWFFLIA 207

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            E  + G+   R  GLG+++  +  KG F  +  G++++   ++A + F+W PL  +  R
Sbjct: 208 IESFTLGNQDFRLPGLGSFLGTAANKGDFKAIFWGLVLLIAIIVATDFFVWRPLIAWAER 267


>gi|254372131|ref|ZP_04987624.1| hypothetical protein FTCG_01273 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569862|gb|EDN35516.1| hypothetical protein FTCG_01273 [Francisella novicida GA99-3549]
          Length = 574

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 206/573 (35%), Positives = 321/573 (56%), Gaps = 23/573 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSIP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + +++AI YA++ +
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALVAI 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306
           +  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I   +S+  F+
Sbjct: 247 IVNIVLFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             L N    L +    I    P   +++       ++ + I   CV  G A+   W    
Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ 
Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  S
Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ GW+WW    +P +FPY V G I+A  GAWN++I +E+  WG   ++  G+GA ++ 
Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAASGAWNSAIAAELVIWGSNTIKVDGIGALVST 531

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +T      E  L V+ +C  V     F+W PLY
Sbjct: 532 TTANNQLHEAALAVVALCSLVAVCVIFIWKPLY 564


>gi|167626895|ref|YP_001677395.1| anion ABC transporter permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596896|gb|ABZ86894.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 574

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 207/573 (36%), Positives = 323/573 (56%), Gaps = 23/573 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + ++ AILYA++ +
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306
           +  I L+DQLLFRP++ WS KF+ E          W+   ++K+  +  I   +S+  F+
Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQLVNTIKPIFSTIVFW 306

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             L N    L +    I    P   +++      +++ + I   CV  G A+   W    
Sbjct: 307 --LINGASFLNKK---INLKSPIRDIKILKKLSCIAWYIVIISACVWAGNAL---WH--- 355

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ 
Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AA P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  S
Sbjct: 412 AAIPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKS 471

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ 
Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +T      E  L V+ +C  V     F+W PLY
Sbjct: 532 TTGNNQLHEAALAVVALCSLVALCVIFIWKPLY 564


>gi|238027857|ref|YP_002912088.1| ABC transporter permease [Burkholderia glumae BGR1]
 gi|237877051|gb|ACR29384.1| ABC transporter, permease protein [Burkholderia glumae BGR1]
          Length = 573

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/540 (36%), Positives = 303/540 (56%), Gaps = 23/540 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L   +L  Y+ RTT+R L  MV S LF+ V+  LAA+   +  V++P ++ M+S+P++
Sbjct: 48  VALAPANLLYYSMRTTMRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLV 107

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF+TFT  +F+ LYP   +G E  AIFA+FT Q WNM  ++YQ++  +P++L EV+ SFR
Sbjct: 108 GFMTFTTGFFLGLYPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFR 167

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIAL 231
            + WQ+FW L  P+S+PG +WN + S +  WF +VASE I    GDTV+ LPG+GSY+++
Sbjct: 168 YNAWQRFWRLEWPYSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVL-LPGVGSYVSM 226

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD--SWVLYLF 289
           A+      A++YA++ ++  I + DQ +FRP++ ++ +F+ + +         SW     
Sbjct: 227 ALDSASYRAVVYALIALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCL 286

Query: 290 RKTNFLRFIGYSSWNFFSPLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
             +   R  G       + L+N  +  L R    +R       L      R +++    W
Sbjct: 287 ASSRIARSAG----ELLAQLANAWIFGLPRVWYALRIDCLTRLLA-----RANWLWSTIW 337

Query: 349 -FCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            F +  G A G      GY +  +   QD+  + W    T  RV + ++++ ++++P+G+
Sbjct: 338 YFALTVGCAYG------GYQLWQYVPKQDLAIMPWWMLETAARVTLAMLLSCLLFVPLGV 391

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W+   P   +  QP AQ+LAA P N+++PL+   V   H +   W   +++ GTQWY LF
Sbjct: 392 WMACHPRRLTWCQPVAQVLAAIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLF 451

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N IAG  A P    EV+  FH+ G  WWR  +LP IFPY VTG I+A GGAWNA+I +E+
Sbjct: 452 NAIAGTLAIPTQITEVSQIFHLKGAMWWRKYMLPAIFPYIVTGTISAAGGAWNAAIAAEI 511

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             WG     T+GLGA+I+ +T  G      LG   MC  V     F+W PLY +  R  R
Sbjct: 512 VQWGSHTASTSGLGAFISTTTANGDHAAAALGCTAMCSMVALCIMFVWQPLYRFAERKFR 571


>gi|134302716|ref|YP_001122684.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|134050493|gb|ABO47564.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis WY96-3418]
          Length = 574

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/574 (35%), Positives = 321/574 (55%), Gaps = 25/574 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIAL + + +++AI  YA++ 
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALGLTDSNIIAIFFYALVA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNF 305
           ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I   +S+  F
Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTIDNPWLYRSYKKSQLVNAIKPIFSTIVF 306

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           +  L N    L +    I    P   +++       ++ + I   CV  G A+   W   
Sbjct: 307 W--LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH-- 356

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+
Sbjct: 357 -----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 411

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            AA P  +FFP+V   +     + N+W   L++ GT  Y+LFNVI+G S  P +  E+  
Sbjct: 412 GAAIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSCYVLFNVISGFSNLPTEIIEMTK 471

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           SFH+ G +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++
Sbjct: 472 SFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 531

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            +T      +  L V+ +C  V     F+W PLY
Sbjct: 532 -TTANNQLHDAALAVVALCSLVALCIIFIWKPLY 564


>gi|217967159|ref|YP_002352665.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
 gi|217336258|gb|ACK42051.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
          Length = 570

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 205/554 (37%), Positives = 312/554 (56%), Gaps = 30/554 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T+     +I+ + L    LP Y+  + LRM+ A  ISL+FT VYA  AA  + L  +L+
Sbjct: 36  NTIYSKPTEIISLDLSPQKLPLYSLFSLLRMIFAYFISLVFTIVYAYTAAYKKSLEKILI 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+LDI+QSIP+L FL    +  + ++PG  +G E+ +I  IFT QVWNM FS YQSL +I
Sbjct: 96  PLLDILQSIPVLSFLPPVFMAVIAMFPGSKLGLEITSIILIFTGQVWNMVFSFYQSLISI 155

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+DL E +   +L+ WQ+FWYL +P++  GL+WN MMS +GGWFF++A EM  + +    
Sbjct: 156 PKDLREAASLLKLNPWQRFWYLELPYAAIGLIWNSMMSWAGGWFFLMACEMFTLTNQNFV 215

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE--RTTGIY 279
           LPG+GSY++ A  + DLL I Y +  ++ VI L DQL++RP++ WS KF++E  +  G Y
Sbjct: 216 LPGLGSYLSFAALKGDLLKIFYGLFALITVIVLLDQLVWRPLLAWSQKFKVEYVQAEGYY 275

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
              S VL  +R++    F+ Y    F  PL   +               ENF  L  N+R
Sbjct: 276 --SSRVLLWYRRSRIFDFL-YKKVIF--PLREKL---------------ENFFVLYYNKR 315

Query: 340 -----VSYMLDIFWFCVVCGVAIGIAWQS-IGYIVNHFTYQDVLY--VIWLGCITMFRVV 391
                 + ++   +  ++  + I +  +  IG +    T    ++  +I+   +T+ RV 
Sbjct: 316 GTQEGKASIVSKLFITLISLITIALVLRGFIGLLRLIITLPLPMWKNIIYSALLTLLRVT 375

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             ++IA    +P+G+ IG  P +S  IQP  Q++A+ PA   FP++V  +       N+ 
Sbjct: 376 TAVLIALSWTLPLGVRIGMNPKLSRLIQPVVQIVASVPATAIFPVIVMYLINLPGGLNIA 435

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +LM+ GTQWY+LFN IAG  + PND  E+++   ++    WR +ILP I P+ VTG I
Sbjct: 436 SIILMLLGTQWYLLFNTIAGGMSIPNDLIEISALLKLSKIDRWRILILPSILPFVVTGGI 495

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GGA+NASIVSE   + +   +  GLGA I E++ KG    +    L+M   V+ +NR
Sbjct: 496 TAMGGAFNASIVSEYIEFQNQIYKIKGLGALITEASSKGDNALLAASTLVMAIMVVTINR 555

Query: 572 FLWHPLYLYGTRCL 585
             W  L+      L
Sbjct: 556 LFWKRLFKKSEELL 569


>gi|320160169|ref|YP_004173393.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319994022|dbj|BAJ62793.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 574

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 211/570 (37%), Positives = 329/570 (57%), Gaps = 16/570 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           F +   +++ G+  +L  GI+     P  + + V I+L    LP YA R+  RM +A ++
Sbjct: 18  FGVADVLVLFGLAALLYAGIRLALNAPPAVREPV-ISLQPQVLPWYALRSVSRMFAAYLL 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S+ FT +Y  +AA +RR   VL+P+LD++QS+PIL FL   ++    + P + + AEL++
Sbjct: 77  SMAFTLIYGRVAAYNRRAEQVLIPLLDVLQSVPILSFLPVVLLGLRAILP-EGLAAELSS 135

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  IFTSQVWN+TF+ YQSL  IP++L E S  FRL+ W +F  L +PF+   LVWN MM
Sbjct: 136 VVLIFTSQVWNLTFAWYQSLRTIPKELREASAIFRLNTWFQFKTLELPFAAIALVWNSMM 195

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S +GGWFF++A+E+  VG+    LPG+G+Y+  A  + ++ AI + +L ++  I + DQL
Sbjct: 196 SWAGGWFFLMAAEIFTVGEQDYRLPGLGAYLHEAANQGNIPAIFWGVLALILTIIILDQL 255

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK-KLC 317
           ++RP++ W+ +F+LE      P  SW   L   +   R I + +   F+P++  +  ++ 
Sbjct: 256 VWRPLMAWTERFKLEMVENDNPPTSWFYNLIGHS---RIIHWLNQRIFTPINEAIDARMA 312

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L           L+   ++++ +  +I    V  GV +    Q++  + N        
Sbjct: 313 RWLN-------PPLLRPAHSRKIPWG-EIVLGLVCIGVVLYWGAQALRLLFNLSLSSWSA 364

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             + +G  T  RV++ ++IA    IPVG+ IG  P ++S  QP  Q++A+ PA   FP+ 
Sbjct: 365 IALGIGA-TFLRVLISLLIALAWTIPVGVAIGTNPRLASLFQPLVQVVASVPATAIFPIF 423

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +       NL   LLM+ GTQWY+LFNVIAGASA P D +  A   H++ W+ WR +
Sbjct: 424 VLLLIQLPGGINLSAILLMLMGTQWYLLFNVIAGASAIPQDLRYTARLIHLSKWQQWRTL 483

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP +FPY VTG ITA GGAWNASIVSE  ++G   + T G+GA I +ST +G +  ++ 
Sbjct: 484 ILPALFPYLVTGMITASGGAWNASIVSEYVTFGGKIVNTVGIGALITQSTAQGDYSLLLA 543

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             L M   V+ +NR  W  +YL      R+
Sbjct: 544 STLAMVVTVVLINRLFWRRMYLLAEERYRM 573


>gi|254368619|ref|ZP_04984635.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121522|gb|EDO65713.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 574

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 200/574 (34%), Positives = 319/574 (55%), Gaps = 25/574 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247
           GL+WN+M+S S  WF + ASE I  + GD  + LP IGSYIAL + + +++AI  YA++ 
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPDIGSYIALGLTDSNIIAIFFYALVA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNF 305
           ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K   +  I   +S+  F
Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKFQLVNAIKPIFSTIVF 306

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           +  L N    L +    I    P   +++       ++ + I   CV  G A+   W   
Sbjct: 307 W--LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH-- 356

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+
Sbjct: 357 -----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 411

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            AA P  +FF +V   +     + N+W   L++ GT WY+LFNVI+G S  P +  E+  
Sbjct: 412 GAAIPQPIFFSIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVISGFSNLPTEIIEMTK 471

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           SFH+ G +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++
Sbjct: 472 SFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 531

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            +T      +  L V+ +C  V     F+W PLY
Sbjct: 532 -TTANNQLHDAALAVVALCSLVALCIIFIWKPLY 564


>gi|91205578|ref|YP_537933.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
 gi|91069122|gb|ABE04844.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
          Length = 389

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/389 (46%), Positives = 250/389 (64%), Gaps = 17/389 (4%)

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE +V+G   I +PGIGSYIA AI E+D+++I+Y+++TM  VI LYD
Sbjct: 1   MMSMSGGWFFLVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYD 60

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW-------NFFSPL 309
           Q++FRP+IVW++KFR E         S V+ LF+KTNF+               NFF  +
Sbjct: 61  QIIFRPLIVWADKFRYENIVKACAPKSMVVDLFKKTNFITIYIAKIISIIFIPCNFF--I 118

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +N  K +   L  +   F +    L        ++ I W+  +  +AI  A +   ++  
Sbjct: 119 NNITKIISNLLSKLYIIFIKPIPNL--------LIAIIWYGCLACLAIYAANKCYDFVKT 170

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             +  + L VI LG  T+ RV+ ++I+A IIW+P+G++IG     + K+ P  Q+ +AFP
Sbjct: 171 TISLSEFLLVIKLGFFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFP 230

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN  FP VV  +S+Y+LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + 
Sbjct: 231 ANFLFPFVVIFISHYNLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVK 290

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW WW+ IILPGIFP+ VTG ITA GGAWNASIV+E+ SWG++ +  TGLG YI  +   
Sbjct: 291 GWLWWKNIILPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANA 350

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             +  V +GV++M  +V+ ++R +W PLY
Sbjct: 351 SDYSRVAIGVVVMSLYVIVISRLVWRPLY 379



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 8/198 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--N 125
           T LR+++ ++++L+           +      ++P++ I  + P      F V++    N
Sbjct: 187 TLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHYN 246

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P       +A  F +     W + F++       P DL+E +  FR+ GW  +  + +
Sbjct: 247 LNP------NIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIIL 300

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P +V  ++ +  G W   + +E++  G+  I   G+G YI  A    D   +   +
Sbjct: 301 PGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVAIGV 360

Query: 246 LTMLGVIFLYDQLLFRPM 263
           + M   + +  +L++RP+
Sbjct: 361 VVMSLYVIVISRLVWRPL 378


>gi|163849245|ref|YP_001637289.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222527230|ref|YP_002571701.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163670534|gb|ABY36900.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222451109|gb|ACM55375.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 570

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/540 (37%), Positives = 305/540 (56%), Gaps = 27/540 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+L + +LP YA  +  RM  A ++S +FT VY  +AA + R   +L+P+LD++QS+PIL
Sbjct: 51  ISLSLTALPFYALYSVGRMAMAYMLSFIFTLVYGYIAAYNPRAERILIPLLDVLQSVPIL 110

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   ++    + P +    EL A+  IFTSQVWNMTF+ YQSL  IP++L E S  FR
Sbjct: 111 SFLPVVLLGLSAILP-QAFAVELTAVVLIFTSQVWNMTFAWYQSLTTIPKELREASSIFR 169

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S WQ+F  L  PF  P LVWN MMS +GGWFF++A+E+  +G+    LPG+G+++  A 
Sbjct: 170 FSWWQRFITLEFPFGAPTLVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLGAFLQTAA 229

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
              DL AI + + ++  VI + DQL++RP++VWS +FRLE       + SW   L++++ 
Sbjct: 230 DTGDLGAIGWGLFSLAVVIVVLDQLVWRPLLVWSRRFRLEFVEREEDSTSWFYDLWQRSM 289

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            + +IG             ++ L   LG      P + +     +R      +F +  + 
Sbjct: 290 LVAWIG-----------RRLRWLNDLLGRWLGQHPADDVPTGERRR-----SLFGWIALA 333

Query: 354 GVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIW 407
            + +   W  +      + V+   + ++L    LG    F RV V + IA +  +P+G+ 
Sbjct: 334 VIIVLTGWGLLNGSRFLFSVSLTQWGEIL----LGVAATFGRVSVAMCIALLWTVPLGVL 389

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG R  I++ +QP  Q+LA+ PA   FP++V  +  +    NL    LM+ GTQWYILFN
Sbjct: 390 IGTRQKIAAVLQPVVQILASIPATALFPVLVLALLEFPGGLNLAAIALMMLGTQWYILFN 449

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           VIAG +A P D +  +    + GWR WR +ILPG+FPY +TG ITA GGAWNASIV+E  
Sbjct: 450 VIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFPYLITGLITASGGAWNASIVAEYV 509

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +     +T G+G+ IA +T+ G F ++    L M   V+ +NR +W  LY       RL
Sbjct: 510 VFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMIITVVTINRLVWRRLYRLAEDRYRL 569



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 5/204 (2%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  AM I+LL+T     L    +++  VL P++ I+ SIP        V+  +  +PG 
Sbjct: 371 RVSVAMCIALLWTVPLGVLIGTRQKIAAVLQPVVQILASIPATALFPVLVLALLE-FPG- 428

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G  LAAI  +     W + F++   +  IP+DL   S   +L GW+++  L +P   P
Sbjct: 429 --GLNLAAIALMMLGTQWYILFNVIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFP 486

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+  ++ +  G W   + +E +V         GIGS IA A    D   +  A LTM+ 
Sbjct: 487 YLITGLITASGGAWNASIVAEYVVFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMII 546

Query: 251 VIFLYDQLLFRPMI-VWSNKFRLE 273
            +   ++L++R +  +  +++RLE
Sbjct: 547 TVVTINRLVWRRLYRLAEDRYRLE 570


>gi|219847812|ref|YP_002462245.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
 gi|219542071|gb|ACL23809.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
          Length = 583

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 208/535 (38%), Positives = 296/535 (55%), Gaps = 15/535 (2%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L + +LP YA R+  RM  A  +S LFT +Y  +AA + R   VL+P+LD++QS+PIL
Sbjct: 62  IDLSLSALPFYALRSVGRMALAYALSFLFTMIYGYIAAYNARAERVLIPLLDVLQSVPIL 121

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   ++    + P + +  EL A+  IFTSQVWNMTF+ YQSL  IPR+L E S  FR
Sbjct: 122 SFLPVVLLSLSTVLP-EALAVELTAVVLIFTSQVWNMTFAWYQSLTTIPRELREASSIFR 180

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S WQ+F  L  PF    LVWN MMS +GGWFF++A+E+  +G+    LPG+G+++  A 
Sbjct: 181 FSRWQRFTTLEFPFGALALVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLGAFLQTAA 240

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRKT 292
              DL AI + +LT++ VI + DQ ++RP++ W+ +FRLE        A SW   L R++
Sbjct: 241 NAGDLTAIGWGILTLVAVIVILDQFVWRPLLAWAGQFRLEMIERDDEEAQSWFYDLIRQS 300

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               +IG         +    + + R L   R   P+ +L   S +R  +   +    VV
Sbjct: 301 VVAGWIG-------GLMGAIDRMIMRRLS--RGPAPDPYLS-GSTRRSWWGWVLVVVSVV 350

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                G     +   V    +  +   +     TM RV   + IA +  +PVG++IG RP
Sbjct: 351 LVGWGGWVGSGLLLSVPLVQWGAIALSV---GATMARVATAMTIALLWTVPVGVFIGTRP 407

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             ++ +QP  Q+ A+ PA   FP++V          NL   LLM+ GTQWYILFNVIAGA
Sbjct: 408 RAAAILQPIVQIAASVPATALFPVLVLAFLALPGGLNLAAVLLMMLGTQWYILFNVIAGA 467

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A P D +  +    + GW+ WR +ILPG+FPY VTG ITA GGAWNASIV+E   +   
Sbjct: 468 AAIPQDLRFTSELLQLRGWQRWRTLILPGLFPYLVTGLITASGGAWNASIVAEYVVFNQQ 527

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             +T G+GA IA +T  G F  +    L M   V+ +NR +W  LY       R+
Sbjct: 528 TYQTIGIGAQIAVATADGDFAGLFAATLAMIVAVVTINRLVWRRLYRLAETKYRM 582



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 5/207 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+ +AM I+LL+T           R   +L PI+ I  S+P        V+ F+ L 
Sbjct: 381 TMARVATAMTIALLWTVPVGVFIGTRPRAAAILQPIVQIAASVPATALFPVLVLAFLAL- 439

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG   G  LAA+  +     W + F++      IP+DL   S   +L GWQ++  L +P 
Sbjct: 440 PG---GLNLAAVLLMMLGTQWYILFNVIAGAAAIPQDLRFTSELLQLRGWQRWRTLILPG 496

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P LV  ++ +  G W   + +E +V         GIG+ IA+A  + D   +  A L 
Sbjct: 497 LFPYLVTGLITASGGAWNASIVAEYVVFNQQTYQTIGIGAQIAVATADGDFAGLFAATLA 556

Query: 248 MLGVIFLYDQLLFRPMI-VWSNKFRLE 273
           M+  +   ++L++R +  +   K+R+E
Sbjct: 557 MIVAVVTINRLVWRRLYRLAETKYRME 583


>gi|223937549|ref|ZP_03629452.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
 gi|223893712|gb|EEF60170.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
          Length = 572

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 207/565 (36%), Positives = 329/565 (58%), Gaps = 25/565 (4%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRD----IVDIVPITLDVHSLPQYASRTTLRMLSA 75
           F  +   +++G++ ++ +GI  T V R+    +  +  I LD+  LP Y   +  R + A
Sbjct: 14  FSWVDLAVLVGLVAVI-YGI--TAVAREWSGQLQPVAEIHLDLRYLPLYTLFSLTRGVIA 70

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            VIS  FT  Y  +AA+ +    V++P+LDI+QSIP+LGFL   V+  ++L+P + +G E
Sbjct: 71  YVISFFFTMTYGYVAARVKGSERVMLPMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLE 130

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +A++  IFT QVWNMTFS Y SL ++P +L  V+R  +L+ WQ+F  L + ++  GLVWN
Sbjct: 131 IASVLMIFTGQVWNMTFSFYYSLKSVPEELNAVARLSKLTWWQRFLRLDLSYAASGLVWN 190

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            M+SM+GGWFF+  SE  V+G     LPG+GSY++LAI++ ++ A +  ++ M  +I   
Sbjct: 191 SMLSMAGGWFFLTVSEAFVLGSHDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFL 250

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQL++RP++ WS KF  E  +     +SW+    R++             + P   ++ K
Sbjct: 251 DQLVWRPVVAWSQKFSDEDASTRGGTESWLWDRVRRS-----------RLWGPFVRSLSK 299

Query: 316 LC-RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--IVNHFT 372
           L  R   ++    P+   Q  S +RV +   + WF V+  ++ G  +  I Y  +++  +
Sbjct: 300 LLPRANKMLSAGLPQP--QSRSQKRV-FAQILKWFFVIAALS-GAIFAGIKYFQLLHSLS 355

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             D   ++    +T  RV+  + +AS+  IPVG+ IG  P  S  +QP  Q++A+FPA +
Sbjct: 356 KADWKSILLSTAMTFGRVIAAVALASLWTIPVGVMIGRNPRWSRAMQPIIQMVASFPAPM 415

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+VV+ V        +    L++ GTQWY+LFNVI+G+SA P +  EV+    ++   
Sbjct: 416 LFPIVVALVLSLGGGLGIGSVFLLLLGTQWYVLFNVISGSSAIPRELWEVSRLKRLSLSA 475

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            WR +ILPGIFP  +TG ITA GGAWNASIV+E   +    L T GLGA I+++T++G F
Sbjct: 476 RWRKLILPGIFPSLLTGWITAMGGAWNASIVAEYMKYKGQTLSTIGLGALISQATDEGRF 535

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPL 577
             +   V +M   V+ +NR +W PL
Sbjct: 536 ALLGAAVGVMSFTVVLVNRLVWRPL 560



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 12/172 (6%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---SLLMIF-GTQWYILFNVIAGASAF 475
           P   +L + P   F P  V  + +   + NL L   S+LMIF G  W + F+      + 
Sbjct: 97  PMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLEIASVLMIFTGQVWNMTFSFYYSLKSV 156

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG----AITACGGAWNASIVSEVASWGH 531
           P +   VA    +T W+  R++ L     Y  +G    ++ +  G W    VSE    G 
Sbjct: 157 PEELNAVARLSKLTWWQ--RFLRLD--LSYAASGLVWNSMLSMAGGWFFLTVSEAFVLGS 212

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              R  GLG+Y++ + E+G+    V+GV+ M   ++ L++ +W P+  +  +
Sbjct: 213 HDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFLDQLVWRPVVAWSQK 264


>gi|170703959|ref|ZP_02894622.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170131130|gb|EDS99794.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 334

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/340 (48%), Positives = 224/340 (65%), Gaps = 7/340 (2%)

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M  VI  YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+
Sbjct: 1   MTVVILAYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFA 60

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
             +    +L  + G +RF  P+        ++ S  +DI W   V      I W+ + ++
Sbjct: 61  KAARIPLRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFV 113

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               T  DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAA
Sbjct: 114 ATGVTMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAA 173

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F 
Sbjct: 174 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 233

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T
Sbjct: 234 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTT 293

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G FP+++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 294 AAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 333



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     + P D  E + +FR+ GWQ +    +P   P  V   + +  G W   
Sbjct: 208 WYILFNVIAGATSYPNDYREAATNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 267

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  G T I   G+G+YIA      D   I+  +  M   + L+++LL+RP+  ++
Sbjct: 268 IVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFA 327

Query: 268 N-KFRLE 273
             K RL+
Sbjct: 328 EAKLRLD 334


>gi|322434965|ref|YP_004217177.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
 gi|321162692|gb|ADW68397.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
          Length = 590

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 307/536 (57%), Gaps = 9/536 (1%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++L   +LP YA  + +R+  A ++SL F   Y   AA + R+   ++ +LDI+QSIP+L
Sbjct: 60  VSLSPRALPAYAFYSVVRIGLAYLLSLAFAIAYGYTAAYNTRIEPFMIAVLDILQSIPVL 119

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   ++  + L+P + +G EL AI  IFT  VWNM FS Y SL +IPR+L E +R +R
Sbjct: 120 SFLPGVMLAMVGLFPTRHLGVELGAIVLIFTGAVWNMAFSFYSSLKSIPRELIEATRVYR 179

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S +Q+   L +P++  GL+WN +MS++G WFF++A EM         LPG+GSY+  A 
Sbjct: 180 YSPFQRLVQLELPYAAIGLLWNSIMSVAGAWFFLMACEMFHFRSQDFRLPGLGSYLQTAA 239

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            + +  AI + + TM+ +I   DQLL+RP+I WS+KF+ E+        S +L L  ++N
Sbjct: 240 DQGNGHAIAWGLFTMVAIIVATDQLLWRPLIAWSDKFKFEQVESSKRVASPILALLTQSN 299

Query: 294 FLRFIGYSSWNFFSPLSNNV--KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            L  +   +     PL+  V  +   R + +++    +      +  + + +L      +
Sbjct: 300 ALTALKEHTTE---PLTEYVYTRYAERRIAILKR---QEGRPPAAPSKSANLLAYALIAI 353

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
              V + +A Q++  +++       L ++     T  RV + + +A+   IPVG+ IGF 
Sbjct: 354 AAVVVLYLARQTL-ILISPLQRSQYLELLKGAAATFGRVNLSLALAAAWTIPVGVAIGFH 412

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P ++   QP AQ+ A+ PA   FP+++  +        +    LM+ GTQWYILFNVIAG
Sbjct: 413 PRLARIAQPLAQIAASVPATALFPVILLALVRIGGGLGIGSIALMLLGTQWYILFNVIAG 472

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A A P D KEVA+ FH +  + W+ +ILPGIFP+ +TG +TA GGAWNASI++E     +
Sbjct: 473 ALAIPTDLKEVATLFHFSTLQRWKTVILPGIFPFLITGMVTASGGAWNASIIAEYFRLNN 532

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             L+T GLGA I+ +TE+G FP ++LG +++   V+  NR +W PL+       RL
Sbjct: 533 QTLQTVGLGAMISNATEQGQFPILLLGTVMISLMVVTTNRLVWRPLFRLAETRYRL 588


>gi|220909907|ref|YP_002485218.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
 gi|219866518|gb|ACL46857.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
          Length = 578

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 204/530 (38%), Positives = 310/530 (58%), Gaps = 18/530 (3%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L   SLP Y +RT LRML A ++SL F+  YA LA  ++    +L+P+LDI+QSIP+L
Sbjct: 52  IDLSPASLPSYTARTLLRMLVAYLLSLGFSLGYAYLAFYNKVAERILLPLLDILQSIPVL 111

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   V+  + L+PG+ IG ELA+I  IFT   WNMTFS YQSL  +P++L EV++ +R
Sbjct: 112 SFLPGVVLALIALFPGQQIGVELASIILIFTGMAWNMTFSFYQSLTGVPKELREVAQIYR 171

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           LS WQ FW + +P  + GL+WN +MS++GGWFF++A E   +G+    L G+GSY+  A 
Sbjct: 172 LSWWQNFWTVDLPAGVIGLIWNSVMSVAGGWFFLIAIESFTLGNRSFKLAGLGSYLGTAA 231

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
              +  A+ Y ++ ++GVI L D L++RP+I W  KF+ +         S+VL   R++ 
Sbjct: 232 NAANYAALTYGLIVLIGVIILIDLLIWRPLIAWGEKFKFQLVEAENVPQSFVLDFLRRSP 291

Query: 294 FLRFIGYSSWNFFSPLSNNVKKL-----CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
            LR +     N F+PL   + +        TL + R      F Q  +      +L  F 
Sbjct: 292 TLRALHL---NLFTPLQETIDRQFATTPASTLPISRAKSSPKFNQWVNR----LLLGGFA 344

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F V+ G     +W+++  ++   ++ D   V+    +T  RV+V + ++ +  +PVG+ I
Sbjct: 345 FIVLWG-----SWEAL-LLLRVLSWADWQTVMLGAILTTIRVLVALALSLLWTVPVGVAI 398

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G  P +S  +QP  Q+ A+ PA   FP+++  ++       +   LLM+ GT WYILFNV
Sbjct: 399 GRSPRLSQLVQPIVQIAASVPATALFPVLLLALANVGGGLQIGSVLLMMLGTMWYILFNV 458

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGA A P +  E A+ + ++  + WR +ILPGIFPY +TG ITA GGAWNASIVSE   
Sbjct: 459 IAGAQAIPTELLEAATVYQLSWSQRWRTVILPGIFPYLITGIITAVGGAWNASIVSEYVE 518

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           + +    T GLG+ I++++  G+FP ++   + M   V+  NR +W  LY
Sbjct: 519 FRNQTETTLGLGSIISKASAAGNFPLLLASTVTMSLLVVLTNRLVWRRLY 568



 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 86/184 (46%), Gaps = 9/184 (4%)

Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-----SLLMIF-G 459
           ++ F   ++ +I  P   +L + P   F P VV  ++   L P   +     S+++IF G
Sbjct: 86  YLAFYNKVAERILLPLLDILQSIPVLSFLPGVV--LALIALFPGQQIGVELASIILIFTG 143

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W + F+     +  P + +EVA  + ++ W+ +  + LP      +  ++ +  G W 
Sbjct: 144 MAWNMTFSFYQSLTGVPKELREVAQIYRLSWWQNFWTVDLPAGVIGLIWNSVMSVAGGWF 203

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             I  E  + G+   +  GLG+Y+  +    ++  +  G++++   ++ ++  +W PL  
Sbjct: 204 FLIAIESFTLGNRSFKLAGLGSYLGTAANAANYAALTYGLIVLIGVIILIDLLIWRPLIA 263

Query: 580 YGTR 583
           +G +
Sbjct: 264 WGEK 267


>gi|218885906|ref|YP_002435227.1| binding-protein-dependent transporters inner membrane component
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756860|gb|ACL07759.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 576

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 208/571 (36%), Positives = 311/571 (54%), Gaps = 18/571 (3%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D+   + V G++ +   GI      R       I+L    LP+YA+ +  RM  A ++S
Sbjct: 20  LDVFGLLFVAGVLGL---GIWFALAHRHAAAGPDISLAPGMLPRYAAYSVGRMFMAYLLS 76

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +LF+  Y TLAA+SRR G VL+ +LDI+QS+PIL FL   ++    + P + +  E A++
Sbjct: 77  MLFSLGYGTLAARSRRAGPVLLAVLDILQSVPILSFLPVVLLSLSAVLP-QAVAVEAASV 135

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IFTSQ WN+TF+ YQ+   +P DL E    +R+  WQ+F  L +PF+   L+WN +MS
Sbjct: 136 VLIFTSQAWNITFAWYQAQTTLPGDLREAVSGYRMGAWQRFRTLDLPFAGVSLLWNSIMS 195

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +GGWFF++A+EM  VG     LPG+GSY+  A   +D  AIL  + TM+ VI   DQL+
Sbjct: 196 WAGGWFFLMAAEMFTVGSRDFRLPGLGSYLQEAAAREDTPAILMGLGTMMVVIVTLDQLV 255

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK-LCR 318
           +RP++ W  +F+L         +SW L L R    +  +        +P +  +   L R
Sbjct: 256 WRPLLAWGERFKLTMVAEDEQPESWFLDLLRAARRMAPVRALLERVLAPAAEGMDAWLIR 315

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDV 376
                   FP +   +   +   +   +F   +   VA G+ W+  G +  V   +++D+
Sbjct: 316 -------RFPPSGESMDVVRHDPWAGRLFGVLLFGCVAFGL-WKGSGLLLQVAPESWRDI 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  I     T  RV+  + +A    +PVG+ IG    ++  +QP  Q+ A+ PA   FP+
Sbjct: 368 VIGI---AATFLRVMAAMAVALAWTLPVGVLIGTNARLARVLQPVVQIAASIPATALFPV 424

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +       N    LLM+ GTQWY+LFN+IAGAS+ P D K+ A+   ++  + WR 
Sbjct: 425 FLMVLVDVTHGLNAAAVLLMLLGTQWYLLFNIIAGASSIPRDLKDTAALIGLSRAQRWRT 484

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP +FPY VTGAITA GGAWNASIVSE  S+G   L  TG+GA IA +T +G FP + 
Sbjct: 485 LILPALFPYIVTGAITASGGAWNASIVSEYVSFGGRTLSATGIGAIIARATAEGDFPLLF 544

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G L M   V+  NR +W  LY       R+
Sbjct: 545 AGTLSMIVTVVGFNRLVWRRLYRLAEERFRM 575


>gi|86160237|ref|YP_467022.1| ABC transporter inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776748|gb|ABC83585.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 579

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 203/539 (37%), Positives = 301/539 (55%), Gaps = 20/539 (3%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T  PR  V+I    L + +LP Y   +  R L+A V+SLLFT  Y   AA+ R    VLV
Sbjct: 48  TGAPRPAVEI---DLSLGALPGYTLLSLSRGLAAYVLSLLFTLAYGYWAARDRIAERVLV 104

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P LDI+QSIP+LGF+   V+  +  +PG  +G ELAA+  IFT Q WNMTFS Y SL +I
Sbjct: 105 PALDILQSIPVLGFMPGLVLGLVAAFPGSNVGLELAAVVMIFTGQAWNMTFSFYHSLKSI 164

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PRDL EV+   R   WQ+F ++ +PF   GLVWN MMSM+GGWFF++ SE  V+GD    
Sbjct: 165 PRDLTEVATLSRFHWWQRFRWVELPFGAIGLVWNGMMSMAGGWFFLMISESFVLGDKDFR 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           LPG+GSY+++A+   D  A+  A++ M  +I   DQLL+RP++VW+ KFR+E +      
Sbjct: 225 LPGLGSYMSVAVAHGDGGAMFAAVVAMASMIVAVDQLLWRPVVVWAQKFRVEESGQTEAM 284

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
           +SW L   R++  L +            S  +++  RT+       P +  +        
Sbjct: 285 ESWFLDFLRRSRLLPWA-----------SGLLRRAVRTVSSTPRPPPRSAPRAGRRS--- 330

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIG--YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +       +   +   + W ++G  +++    +     +     +T+ RV++   + ++
Sbjct: 331 -LAGAVSLALFVALLALLGWSAVGLVHLLRRVPFGAWAGIGAAATLTLGRVLLATALGTL 389

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +P G+ IG  P +S  +QP  Q++A+FPA + FP VV+ ++   +       LLM+ G
Sbjct: 390 WTVPAGLAIGLSPRLSRILQPVVQVVASFPAPMLFPAVVAVLAAAGVGLGWGSILLMLLG 449

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           TQWYILFNVIAGA+A P D +E A  + +   + +R + LP +FPY VTG +TA GGAWN
Sbjct: 450 TQWYILFNVIAGATAIPADLREAARVYRVGTLQRFRDLYLPAVFPYLVTGWVTAAGGAWN 509

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           ASIVSE  S+    L T GLGA I+ +   G    +   + +M   V   NR +W  L+
Sbjct: 510 ASIVSEYMSFRGRVLATDGLGARISHAAASGDLAVLAAAITVMAALVAIFNRLVWRRLH 568



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 9/180 (5%)

Query: 411 RPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYYHLNPNLWLSL---LMIF-GTQWYI 464
           R  I+ ++  P   +L + P   F P LV+  V+ +    N+ L L   +MIF G  W +
Sbjct: 95  RDRIAERVLVPALDILQSIPVLGFMPGLVLGLVAAFP-GSNVGLELAAVVMIFTGQAWNM 153

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP-GIFPYYVTGAITACGGAWNASIV 523
            F+      + P D  EVA+      W+ +R++ LP G       G ++  GG W   ++
Sbjct: 154 TFSFYHSLKSIPRDLTEVATLSRFHWWQRFRWVELPFGAIGLVWNGMMSMAGG-WFFLMI 212

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           SE    G    R  GLG+Y++ +   G    +   V+ M   ++A+++ LW P+ ++  +
Sbjct: 213 SESFVLGDKDFRLPGLGSYMSVAVAHGDGGAMFAAVVAMASMIVAVDQLLWRPVVVWAQK 272


>gi|307152632|ref|YP_003888016.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982860|gb|ADN14741.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 578

 Score =  336 bits (861), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 208/529 (39%), Positives = 304/529 (57%), Gaps = 16/529 (3%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  ++  LP Y ++T LRM  A  +SL FT VYA  A +S     +L+P+LDI+QSIP+L
Sbjct: 52  INTNLSELPSYTAQTLLRMTVAYFLSLGFTLVYAYTAYRSAVAAQILLPLLDILQSIPVL 111

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   V+  + L+PG+ IG E+AA+  IFT   WNMTFS YQSL NIP++L E +R +R
Sbjct: 112 SFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMTWNMTFSFYQSLSNIPKELLEAARIYR 171

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ WQ+FW L +P    GLVWN +MS++GGWFF++A E   +G     LPG+GS++A A 
Sbjct: 172 LNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFLIAIESFTLGKRSFRLPGLGSFLAKAA 231

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            E +  AI + ++ ++GVI L D L++RP+I W  +F+ E  T      S VL   R++ 
Sbjct: 232 DEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWVERFKFEMVTSENAPQSEVLDFLRRSP 291

Query: 294 FLRFIGYSSWNFFSPLSNNVKK-LCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFC 350
            LR     S     P   NV + L +TL   RF       +  S  R      +  F F 
Sbjct: 292 TLRAF---SQQILQPFWQNVDRGLNQTL--TRFSRRSFSGKTSSLGRWFNGLFVSGFAFI 346

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-IPVGIWIG 409
           V+ G      W+++  ++      D   ++ +G I     V+  +I S++W +PVG+ IG
Sbjct: 347 VIWGT-----WEAV-LLLRTLDLSDWRQLM-IGAIESALRVMTALILSLLWTVPVGVAIG 399

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P ++  +QP  Q++A+ PA   FP+++  ++       +    LM+ GT WYILFNVI
Sbjct: 400 RNPKLAQILQPIVQIVASVPATALFPVLLLFLARLGGGLQIGSVALMMLGTMWYILFNVI 459

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGA + P++  E A  + ++    W+ +ILPGIFPY +TG ITA GGAWNASIVSE   +
Sbjct: 460 AGAQSIPSELFEAAKIYKLSLIERWQTVILPGIFPYLITGIITAVGGAWNASIVSEYVHF 519

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
               L TTGLG  I+ +T  G+FP ++    +M   V+  NR +W  LY
Sbjct: 520 QGHTLTTTGLGETISVATASGNFPLLLAATGVMSLLVVLTNRLVWRRLY 568



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQ 461
           +  +R  ++++I  P   +L + P   F P +V++ +  +    +   +   +L+  G  
Sbjct: 86  YTAYRSAVAAQILLPLLDILQSIPVLSFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMT 145

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W + F+     S  P +  E A  + +  W+ +  + LP      V  ++ +  G W   
Sbjct: 146 WNMTFSFYQSLSNIPKELLEAARIYRLNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFL 205

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           I  E  + G    R  GLG+++A++ ++G++  +  G++++   ++ L+  +W PL  + 
Sbjct: 206 IAIESFTLGKRSFRLPGLGSFLAKAADEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWV 265

Query: 582 TR 583
            R
Sbjct: 266 ER 267


>gi|281492278|ref|YP_003354258.1| ABC transporter permease [Lactococcus lactis subsp. lactis KF147]
 gi|161702115|gb|ABX75585.1| ABC transporter, permease protein [Lactococcus lactis subsp. lactis
           KF147]
          Length = 599

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/569 (34%), Positives = 315/569 (55%), Gaps = 23/569 (4%)

Query: 22  LLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L AF+L++  I I        +    D V  +   L + +L  ++ RT  RM+  M+ S+
Sbjct: 43  LFAFILIVTQITINQPLSSLPSQSSVDDVKKMHDFLSIGNLAYFSMRTMFRMIVGMMWSI 102

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           LF+ +   LA K +    +++P+++ ++S+P+LGF+TFT  + + LYP  V+GAE  AIF
Sbjct: 103 LFSVICGVLAIKFKTARRIILPMVNFLESVPLLGFMTFTTAFLLGLYPNNVMGAEALAIF 162

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+FT Q WN+  S+YQ +  +P+DL+EV+  FR S W+KFW L   +S+PGL+WN+++S 
Sbjct: 163 AVFTGQAWNIMLSLYQIMEVVPKDLKEVTSQFRYSAWEKFWRLEFVYSIPGLLWNLVISQ 222

Query: 201 SGGWFFVVASEMIVVG----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           S  WF +VASE + V     +T+I LPGIGSYI +A+   D  A  +A++ ++  + + +
Sbjct: 223 SAAWFAIVASEQVTVAIPKSETLI-LPGIGSYIQVALDRADFKACGFAVIALIINVVILN 281

Query: 257 QLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN-VK 314
            L+F+P++  +  +R  E TT   P  S V  L + +NF    G     +   + +  + 
Sbjct: 282 FLVFQPLVKATYYYRYDEGTTQGNPPKSIVYNLVKASNF----GKILMKWIQKIKDFWIF 337

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           KL R   ++R +    +L      +V   + I W+ ++ G A+ I+   +   + H   +
Sbjct: 338 KLPRVWYILRINLIFKYL-----GKVKKYISIIWY-ILLGYAVVISAIKLYRFLPH---E 388

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +  L  +T  RVV+ ++IA+ I+ P+G+W+       S IQP  Q++ + P+NV+ 
Sbjct: 389 DFSIIPHLMLLTTLRVVLAMLIAAAIFTPLGVWVASNKRRLSFIQPIGQVVGSIPSNVYT 448

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P +V  +S  +     W+  L++ G QWY  FNVIAG  A P+D KEV   F ++ ++WW
Sbjct: 449 PFIVIFISLGYKQLEWWILPLIMVGCQWYYFFNVIAGYLAIPDDIKEVTKIFPLSKFKWW 508

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
              ++P +FPY +T  I A G AWNA I +E   WG   +  TGLG YIA     G   +
Sbjct: 509 TRYLIPSMFPYLITAIINAAGAAWNADIAAESLQWGKETINVTGLGQYIA--VNDGIKDK 566

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             LG L MC  V     F+W PLY Y   
Sbjct: 567 SALGTLAMCAVVGLCIIFVWQPLYKYARE 595


>gi|170703452|ref|ZP_02894222.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170131637|gb|EDT00195.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 333

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/338 (46%), Positives = 217/338 (64%), Gaps = 10/338 (2%)

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPL 309
           VI  YDQ LFRP++ W++KFR+E T       SW+L + R+T+ + + +  + W      
Sbjct: 4   VILAYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAA 63

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
              ++   R          +   +  S +  S + DI W   V  V + +AW+ + ++  
Sbjct: 64  RIPLRAPSRN---------DARARAASVRGSSRIGDIAWGTFVILVTVYVAWRVVSFVAT 114

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             T  +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFP
Sbjct: 115 GVTTGEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFP 174

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN+ FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I 
Sbjct: 175 ANLLFPVFVIAIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIR 234

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  
Sbjct: 235 GWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAA 294

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G FP+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 295 GDFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 332



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     + P D +E +++FR+ GWQ +    +P   P  V   + +  G W   
Sbjct: 207 WYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 266

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+GSYIA      D   I+  +  M   + L+++LL+RPM  ++
Sbjct: 267 IVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 326

Query: 268 -NKFRLE 273
            ++ RL+
Sbjct: 327 ESRLRLD 333


>gi|257085682|ref|ZP_05580043.1| ABC transporter permease component [Enterococcus faecalis Fly1]
 gi|256993712|gb|EEU81014.1| ABC transporter permease component [Enterococcus faecalis Fly1]
          Length = 585

 Score =  312 bits (800), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 292/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  + L   W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFLKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|315151513|gb|EFT95529.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
          Length = 590

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIVGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|315030083|gb|EFT42015.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 590

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKFALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|315145489|gb|EFT89505.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 590

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVEMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|227552838|ref|ZP_03982887.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229546263|ref|ZP_04434988.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|229550452|ref|ZP_04439177.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|256852709|ref|ZP_05558079.1| ABC transporter [Enterococcus faecalis T8]
 gi|293382614|ref|ZP_06628545.1| ABC transporter, permease protein [Enterococcus faecalis R712]
 gi|293387504|ref|ZP_06632054.1| ABC transporter, permease protein [Enterococcus faecalis S613]
 gi|307269364|ref|ZP_07550711.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307272307|ref|ZP_07553565.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307275184|ref|ZP_07556332.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307281685|ref|ZP_07561904.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307290727|ref|ZP_07570629.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312899285|ref|ZP_07758621.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312908093|ref|ZP_07767073.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312979014|ref|ZP_07790734.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227178016|gb|EEI58988.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229304432|gb|EEN70428.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|229308624|gb|EEN74611.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|256711168|gb|EEU26206.1| ABC transporter [Enterococcus faecalis T8]
 gi|291080014|gb|EFE17378.1| ABC transporter, permease protein [Enterococcus faecalis R712]
 gi|291083088|gb|EFE20051.1| ABC transporter, permease protein [Enterococcus faecalis S613]
 gi|306498227|gb|EFM67742.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306503916|gb|EFM73135.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508126|gb|EFM77248.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511002|gb|EFM80014.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306514301|gb|EFM82869.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625904|gb|EFQ09187.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|311288193|gb|EFQ66749.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293570|gb|EFQ72126.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315026922|gb|EFT38854.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315033145|gb|EFT45077.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034115|gb|EFT46047.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315146470|gb|EFT90486.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315156438|gb|EFU00455.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315160071|gb|EFU04088.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160897|gb|EFU04914.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315169124|gb|EFU13141.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315171730|gb|EFU15747.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174572|gb|EFU18589.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315575453|gb|EFU87644.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581015|gb|EFU93206.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|327534689|gb|AEA93523.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis OG1RF]
 gi|329577146|gb|EGG58617.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 590

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|312904784|ref|ZP_07763929.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|310631875|gb|EFQ15158.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|315576827|gb|EFU89018.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
          Length = 590

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 290/548 (52%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YI  S   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|312952925|ref|ZP_07771782.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310629121|gb|EFQ12404.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|315153623|gb|EFT97639.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
          Length = 590

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 AFVWQPLY 581


>gi|255973271|ref|ZP_05423857.1| ABC transporter permease [Enterococcus faecalis T1]
 gi|255964289|gb|EET96765.1| ABC transporter permease [Enterococcus faecalis T1]
          Length = 585

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|257089467|ref|ZP_05583828.1| ABC transporter permease [Enterococcus faecalis CH188]
 gi|256998279|gb|EEU84799.1| ABC transporter permease [Enterococcus faecalis CH188]
          Length = 585

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 290/548 (52%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YI  S   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|256762067|ref|ZP_05502647.1| ABC transporter permease [Enterococcus faecalis T3]
 gi|256683318|gb|EEU23013.1| ABC transporter permease [Enterococcus faecalis T3]
          Length = 585

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|29375633|ref|NP_814787.1| ABC transporter, permease protein [Enterococcus faecalis V583]
 gi|255976265|ref|ZP_05426851.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256958551|ref|ZP_05562722.1| ABC transporter permease component [Enterococcus faecalis DS5]
 gi|256962353|ref|ZP_05566524.1| ABC transporter permease component [Enterococcus faecalis Merz96]
 gi|256965545|ref|ZP_05569716.1| ABC transporter permease component [Enterococcus faecalis HIP11704]
 gi|257078141|ref|ZP_05572502.1| ABC transporter permease component [Enterococcus faecalis JH1]
 gi|257086411|ref|ZP_05580772.1| ABC transporter permease component [Enterococcus faecalis D6]
 gi|257415672|ref|ZP_05592666.1| ABC transporter permease component [Enterococcus faecalis AR01/DG]
 gi|257418889|ref|ZP_05595883.1| ABC transporter permease [Enterococcus faecalis T11]
 gi|257423026|ref|ZP_05600016.1| ABC transporter [Enterococcus faecalis X98]
 gi|294780797|ref|ZP_06746153.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859648|ref|ZP_07105736.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|29343094|gb|AAO80857.1| ABC transporter, permease protein [Enterococcus faecalis V583]
 gi|255969137|gb|EET99759.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256949047|gb|EEU65679.1| ABC transporter permease component [Enterococcus faecalis DS5]
 gi|256952849|gb|EEU69481.1| ABC transporter permease component [Enterococcus faecalis Merz96]
 gi|256956041|gb|EEU72673.1| ABC transporter permease component [Enterococcus faecalis HIP11704]
 gi|256986171|gb|EEU73473.1| ABC transporter permease component [Enterococcus faecalis JH1]
 gi|256994441|gb|EEU81743.1| ABC transporter permease component [Enterococcus faecalis D6]
 gi|257157500|gb|EEU87460.1| ABC transporter permease component [Enterococcus faecalis ARO1/DG]
 gi|257160717|gb|EEU90677.1| ABC transporter permease [Enterococcus faecalis T11]
 gi|257164850|gb|EEU94810.1| ABC transporter [Enterococcus faecalis X98]
 gi|294452117|gb|EFG20563.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300850466|gb|EFK78215.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|323480296|gb|ADX79735.1| ABC-type anion transport system [Enterococcus faecalis 62]
          Length = 585

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|227518311|ref|ZP_03948360.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
 gi|227074232|gb|EEI12195.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
          Length = 590

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 345 LLAKLR--HFFKTLWYVSLTIVGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 574 VFVWQPLY 581


>gi|307288219|ref|ZP_07568219.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306500817|gb|EFM70136.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|315165381|gb|EFU09398.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
          Length = 590

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 289/559 (51%), Gaps = 52/559 (9%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 52  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291

Query: 275 TTGIYPADSWVLYLFRKTNFLR-----FIGYSS---------WNFFSPLSNNVKKLCRTL 320
                P  S + +L +K    +     F+ +S          W FF      +  L R L
Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYGLPKVWYFF-----KLDYLYRLL 346

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYV 379
             +R  F           +  + + +    V C + +            HF  +QD   +
Sbjct: 347 AKLRHFF-----------KTLWYVSLTIIGVYCSIKL-----------YHFLPHQDFSMI 384

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
             L   T  RV + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V 
Sbjct: 385 PRLTLYTTLRVTLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVL 444

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +S        W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++
Sbjct: 445 IISMGFNKLEWWILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLI 504

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P I PY +T  I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG 
Sbjct: 505 PSILPYLITAIINAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGT 562

Query: 560 LIMCCFVLALNRFLWHPLY 578
           L MC  V     F+W PLY
Sbjct: 563 LAMCFVVGLCIAFVWQPLY 581


>gi|257082979|ref|ZP_05577340.1| ABC transporter permease component [Enterococcus faecalis E1Sol]
 gi|256991009|gb|EEU78311.1| ABC transporter permease component [Enterococcus faecalis E1Sol]
          Length = 585

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G QWY  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YIA +   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGTKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|28378703|ref|NP_785595.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           WCFS1]
 gi|28271540|emb|CAD64445.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           WCFS1]
          Length = 580

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/560 (32%), Positives = 308/560 (55%), Gaps = 43/560 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  +TT  +D        L +  L   A RTT R+   M  S+LF+ ++  LAA+ R  
Sbjct: 47  QGYLDTTGGKDY-------LTMSHLVAAALRTTTRLFIGMGYSILFSLIFGILAARYRSA 99

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             V++PI+++++S+P+LGFLTFT  +FM L+P  V+G E  AIF +FT+Q WN+  ++YQ
Sbjct: 100 RYVILPIVNLLESVPLLGFLTFTTAWFMGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQ 159

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE---MI 213
           SL   P DL  V++ F  + WQ+FW L   ++ P ++WN+++S S  WF +VA E   ++
Sbjct: 160 SLRVTPEDLMTVAKQFGCNSWQRFWRLEFLYATPSILWNIVISQSAAWFALVACEQATIV 219

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           V  +  + LPGIGSYI +A+   +  A++ A++ ++  + L +  +F+P+I  +  ++  
Sbjct: 220 VPKNETLVLPGIGSYIQIALDTANFGAVINAVIALVICVLLVNVFIFQPLIKGTAHYKYG 279

Query: 274 RTTGIY-PADSWV--LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF--- 327
            +T    P  S V  L +  K   L                 VK+L R    IR+ +   
Sbjct: 280 TSTDSQLPQQSQVYDLMVMAKVPLL-----------------VKRLHRH---IRYWWLYG 319

Query: 328 -PENFLQLCSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLG 383
            P+ + +L  ++  R+     ++W  +   + I +    +G  ++ +  + ++  +    
Sbjct: 320 APKQWQKLGFSRIIRILKKYTVYW-RIAWWLVIAVGLYRLGVLLIKYLDWINLSVLFKWT 378

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T  RV++ ++++++I+IP+ +W+         IQP  Q+L + PA+++ P+V   ++ 
Sbjct: 379 FLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIPADIYIPIVALMITL 438

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                + W+  L++ GTQWY  FN+IAG  A P+D K+V + FH++GWRWW + ++P +F
Sbjct: 439 TGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLSGWRWWTHFLIPSLF 498

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++T  I A G AWNA I +E+ SWG      TGLGAYIA++      P    GVLI+C
Sbjct: 499 PSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQNINNK--PAEATGVLIIC 556

Query: 564 CFVLALNRFLWHPLYLYGTR 583
             V      +W PLY +  R
Sbjct: 557 VIVGLCVVLIWQPLYRFAER 576


>gi|328676224|gb|AEB27094.1| ABC transporter, permease protein [Francisella cf. novicida Fx1]
          Length = 445

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 170/452 (37%), Positives = 257/452 (56%), Gaps = 22/452 (4%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+PG
Sbjct: 1   MGLEAAAIFGIFTSQAWNMALILYQTIRIVPTELTEAATAFKLNAWQRFWKIELPYSVPG 60

Query: 192 LVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           L+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIALA+ + +++AI YA+  ++
Sbjct: 61  LLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALAAII 118

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFFS 307
             I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I   +S+  F+ 
Sbjct: 119 INIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFW- 177

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            L N    L +    I    P   +++       ++ + I   CV  G A+   W     
Sbjct: 178 -LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH---- 226

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ A
Sbjct: 227 ---FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 283

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  SF
Sbjct: 284 AIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSF 343

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           H+ GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +
Sbjct: 344 HLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTT 403

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           T      E  L V+ +C  V     F+W PLY
Sbjct: 404 TANNQLHEAALAVIALCSLVALCVIFIWKPLY 435



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 4/197 (2%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TT+R+  AM+IS+            S +    + PI+ I  +IP   F  F +V  + L
Sbjct: 242 ETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF--FPIVAVLIL 299

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +   +  I  I T   W + F++     N+P ++ E+++SF L GW+ ++   +P
Sbjct: 300 AGDGSL--NVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKGWKWWFKFAIP 357

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P +V  ++ +  G W   +A+E+++ G   I + GIG+ ++       L     A++
Sbjct: 358 AVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLHEAALAVI 417

Query: 247 TMLGVIFLYDQLLFRPM 263
            +  ++ L    +++P+
Sbjct: 418 ALCSLVALCVIFIWKPL 434


>gi|256618637|ref|ZP_05475483.1| ABC transporter permease component [Enterococcus faecalis ATCC
           4200]
 gi|256598164|gb|EEU17340.1| ABC transporter permease component [Enterococcus faecalis ATCC
           4200]
          Length = 585

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/548 (33%), Positives = 289/548 (52%), Gaps = 30/548 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           T+P +     P   D    P     ++ RT  RM+  M  S LF+FV+  LA K +    
Sbjct: 47  TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V++P+++ ++S+P+LGFLTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +
Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216
             IP DL  V+  F+ + W+KFW L   +S+PGL+WN+++S +  WF +VASE   V   
Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274
            +T + LPGIGSYI +A+   D  + L+A+  +L  + + + L+F+P++  +  F+ E  
Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286

Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333
                P  S + +L +K    ++   +   F      ++ K       + + F  ++L +
Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339

Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390
           L +  R  +     W+    + GV   I        + HF  +QD   +  L   T  RV
Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +++A II+ P+ IW+       S +QP  Q+L + P+NV+ P +V  +S        
Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W+  L++ G Q Y  FNVIAG  A P+D ++V   F ++ W+WW   ++P I PY +T  
Sbjct: 451 WILPLIMVGCQGYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I A G AWNA I +E   WG   +  TGLG YI  S   G   +  LG L MC  V    
Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 568

Query: 571 RFLWHPLY 578
            F+W PLY
Sbjct: 569 AFVWQPLY 576


>gi|167909682|ref|ZP_02496773.1| putative transmembrane transporter [Burkholderia pseudomallei 112]
          Length = 310

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 148/262 (56%), Positives = 192/262 (73%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIG 299
                SW+L L  + +  + +G
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P+D  E + S   TGW R+WR + +P   P  V  A
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + +  G W   + SE  S G + +   G+GAY+A +  +     V
Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242


>gi|167917694|ref|ZP_02504785.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 317

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 148/262 (56%), Positives = 192/262 (73%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIG 299
                SW+L L  + +  + +G
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P+D  E + S   TGW R+WR + +P   P  V  A
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + +  G W   + SE  S G + +   G+GAY+A +  +     V
Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242


>gi|167844450|ref|ZP_02469958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 321

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 148/262 (56%), Positives = 192/262 (73%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNFLRFIG 299
                SW+L L  + +  + +G
Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P+D  E + S   TGW R+WR + +P   P  V  A
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + +  G W   + SE  S G + +   G+GAY+A +  +     V
Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242


>gi|167718237|ref|ZP_02401473.1| putative transmembrane transporter [Burkholderia pseudomallei DM98]
          Length = 298

 Score =  299 bits (765), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 147/257 (57%), Positives = 189/257 (73%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRKTNF 294
                SW+L L  + + 
Sbjct: 279 GPAPRSWLLDLLHRASL 295



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P+D  E + S   TGW R+WR + +P   P  V  A
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + +  G W   + SE  S G + +   G+GAY+A +  +     V
Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242


>gi|167737269|ref|ZP_02410043.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
          Length = 292

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/254 (57%), Positives = 188/254 (74%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+++  +P D+     I+L   +LP YA RT LRML+A+  S +FTF YATLAAKSR   
Sbjct: 39  GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELAAIFAIFTSQ WNM FS YQS
Sbjct: 99  AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG 
Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQLLFRPM+ W++KFR ++T  
Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278

Query: 278 IYPADSWVLYLFRK 291
                SW+L L  +
Sbjct: 279 GPAPRSWLLDLLHR 292



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           ++  IF +Q W + F+        P+D  E + S   TGW R+WR + +P   P  V  A
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + +  G W   + SE  S G + +   G+GAY+A +  +     V
Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242


>gi|83589273|ref|YP_429282.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83572187|gb|ABC18739.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 573

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 180/545 (33%), Positives = 290/545 (53%), Gaps = 23/545 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +   +  LP YA R+ LRML A ++SL+FT  Y   A    R    L+PILDI+QS+PIL
Sbjct: 39  VVTSISVLPYYAFRSFLRMLGAYLLSLIFTLTYGYKAGTDTRAERWLIPILDILQSVPIL 98

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF    V +F++L+ G+++G ELA+IF IFTSQ WNMTF  Y+SL  IPRDL E + ++R
Sbjct: 99  GFFPAAVYFFVSLFQGRLLGVELASIFLIFTSQAWNMTFGFYESLTTIPRDLLEATVAYR 158

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++GW++F  L +P  +P LV+N +MS +GGW+F++A+E+I +G     LPG+GSY+    
Sbjct: 159 VTGWRRFRTLYLPAGIPKLVYNSIMSWAGGWYFLIAAEIIAIGPVEYSLPGLGSYLIRTT 218

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
           +  +L   +  +LT++ +I + +  ++RP+  W+  F+ E  +G                
Sbjct: 219 ERGELGLTMVGLLTLVALITMMNIFIWRPLSTWAENFKYEFGSG------------GSNR 266

Query: 294 FLRFIGYSSW---NFFSPLSNNVKK----LCRTLGVIRFHF---PENFLQLCSNQRVSYM 343
               +GY  W     F  +   V K    L R +G +       PE + + C        
Sbjct: 267 LPSGLGYRLWWQAPGFREIRIGVIKGGAFLGRAVGNLGARLAPGPEKWQRWCRYLARVER 326

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L  +   ++   A+     ++G +        V  +      + FR++   +++    +P
Sbjct: 327 LVAWGLALLLVYALVRGLLALGTLFLEPWQPQVFSIPAALLFSFFRLMAAYLLSLAWTLP 386

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           V IWIG    +   + P  ++LA+ PA   FP++V  +       NL   LL++ G QWY
Sbjct: 387 VAIWIGHNERVYEFLTPVFEILASVPATALFPIIVFVLIGLTGGMNLAAILLVLTGMQWY 446

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +LFN+IAG  + P D KE A++F + GW + R ++LP + P  +TG+ITA GG WNA IV
Sbjct: 447 LLFNLIAGVKSIPGDLKEAAAAFGLRGWGYLRRVVLPAMVPSLITGSITAWGGGWNALIV 506

Query: 524 SEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
           +E   +        G+G+ +  +T   GSF  +   ++ M   ++ +NRF W  LY    
Sbjct: 507 AEYVVYAGHTYTAFGIGSLLDMATYGSGSFQVIWSSLIAMMVTIVLMNRFFWRRLYEMAA 566

Query: 583 RCLRL 587
           R  ++
Sbjct: 567 RRFKI 571



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 6/223 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P    V S+P     +  R+++A ++SL +T   A     + R+   L P+ +I+ S+P 
Sbjct: 354 PWQPQVFSIPAALLFSFFRLMAAYLLSLAWTLPVAIWIGHNERVYEFLTPVFEILASVPA 413

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                F ++ F+ +  G   G  LAAI  + T   W + F++   + +IP DL+E + +F
Sbjct: 414 TAL--FPIIVFVLI--GLTGGMNLAAILLVLTGMQWYLLFNLIAGVKSIPGDLKEAAAAF 469

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            L GW     + +P  +P L+   + +  GGW  ++ +E +V         GIGS + +A
Sbjct: 470 GLRGWGYLRRVVLPAMVPSLITGSITAWGGGWNALIVAEYVVYAGHTYTAFGIGSLLDMA 529

Query: 233 IKEQDLLAILY-AMLTMLGVIFLYDQLLFRPMI-VWSNKFRLE 273
                   +++ +++ M+  I L ++  +R +  + + +F++E
Sbjct: 530 TYGSGSFQVIWSSLIAMMVTIVLMNRFFWRRLYEMAARRFKIE 572


>gi|88062879|gb|ABD39044.1| binding protein dependent transporter [Mesorhizobium loti]
          Length = 194

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 126/187 (67%), Positives = 162/187 (86%), Gaps = 3/187 (1%)

Query: 86  YATLAAKSRRLG---MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +AT  ++ ++L    +V++P+LDI+QS+PILGFLTFTVV+FMNL+PG+V+GAELA++FAI
Sbjct: 4   FATAESQPKKLARAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAI 63

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           FTSQ WNMTFS+YQS+ N+P+DLEE ++SF LSGWQ+FW L VPF+MPGL+WN MMSMSG
Sbjct: 64  FTSQAWNMTFSLYQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSG 123

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           GWFFVVASE I VG+T + LPGIGSY+A+AI++QDL AILYAML ML VI  YDQLLFRP
Sbjct: 124 GWFFVVASEAITVGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRP 183

Query: 263 MIVWSNK 269
           ++ W+ +
Sbjct: 184 IVAWAAE 190



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 3/135 (2%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           S+  IF +Q W + F++       P D +E   SFH++GW R+WR + +P   P  +  A
Sbjct: 59  SVFAIFTSQAWNMTFSLYQSIRNVPKDLEEATQSFHLSGWQRFWR-LDVPFAMPGLIWNA 117

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +  G W   + SE  + G+  +   G+G+Y+A + ++   P ++  +L M   ++A +
Sbjct: 118 MMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYD 177

Query: 571 RFLWHPLYLYGTRCL 585
           + L+ P+  +    +
Sbjct: 178 QLLFRPIVAWAAEII 192


>gi|156740134|ref|YP_001430263.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156231462|gb|ABU56245.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 671

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/327 (46%), Positives = 211/327 (64%), Gaps = 15/327 (4%)

Query: 40  QETTVPRDIVDI--VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           Q  + P D+     + ++LD  +LP Y  RT  RM  A+++SLLFTF  ATLAAKSRR  
Sbjct: 40  QGASQPFDVAATPDLTVSLDPINLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAE 99

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V++P LD +QS+PILGFLT T   F+ ++ G ++G E A+IFAIFTSQVWNM FS Y S
Sbjct: 100 TVIIPALDFLQSLPILGFLTVTTAIFIGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHS 159

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG 216
           L   PR+L E +   RLS W+KFW L VPF+MPGL+WN MMS+SGGWFFVVASE+I VVG
Sbjct: 160 LITTPRELREAAAVLRLSPWKKFWNLDVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVG 219

Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            D    LPGIGSYIALAI++ D+ A++YA LT+L +I +YDQ++FRP++ WS KF+ E++
Sbjct: 220 RDNDQYLPGIGSYIALAIEQADIGAMVYAGLTLLIIILIYDQVIFRPIVAWSEKFKFEQS 279

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
                A SW+L L +++ F            S +   +++   T+ V     P + +++ 
Sbjct: 280 EAQEVAQSWMLRLLQRSGFA--------GSLSAIGAAIRRSVPTIPV--REVPGSPVEVQ 329

Query: 336 SNQR-VSYMLDIFWFCVVCGVAIGIAW 361
            + R +   +D  W+ +V  V +   W
Sbjct: 330 PDPRPIDRAIDRVWYAIVIAVTLWAVW 356



 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/259 (46%), Positives = 153/259 (59%), Gaps = 13/259 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   L  N+RV    D+   C    V  G +AW             +VL  +WLG +T  
Sbjct: 424 DLAALLRNERVGAPDDLAAACAAPMVPAGKVAWS------------EVLECLWLGLLTTV 471

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RVV+ I I++++W P+G+WIG RP ++   QP AQ  AAFPAN+ FP+ V  ++ Y L  
Sbjct: 472 RVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPANLLFPVAVVLIATYALPQ 531

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           NL+ + LMI G QWYILFNVIAG  + PND KE A    + GW WWR +I+P IFP +VT
Sbjct: 532 NLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLIIPAIFPAFVT 591

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G ITA GG+WNASIVSEV SWG   L  +GLGAYIA  +     P V LG+L+M   VLA
Sbjct: 592 GGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGMLVMGSLVLA 651

Query: 569 LNRFLWHPLYLYGTRCLRL 587
            NR  W  LY       RL
Sbjct: 652 FNRLFWRWLYALAETRFRL 670



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     +IP DL+E ++   L GW  +  L +P   P  V   + +  G W   
Sbjct: 545 WYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLIIPAIFPAFVTGGITASGGSWNAS 604

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE++  G T + L G+G+YIA     +    +   ML M  ++  +++L +R +   +
Sbjct: 605 IVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGMLVMGSLVLAFNRLFWRWLYALA 664

Query: 268 N-KFRLE 273
             +FRL+
Sbjct: 665 ETRFRLD 671


>gi|312797024|ref|YP_004029946.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454]
 gi|312168799|emb|CBW75802.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 212

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/194 (60%), Positives = 148/194 (76%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I IAS++W+P+G+ IG RP ++ K+QP AQ LAAFPAN+ FP+ V  +  + LNP++WLS
Sbjct: 18  IAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFGLNPDIWLS 77

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L++ GTQWYILFNVIAGASA+PNDFKE A++F I GW+WWR ++LPGIFPYYVTGAITA
Sbjct: 78  PLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAITA 137

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GGAWNASIVSE   WG  H+   GLGAYIA+ T  G +P+++LG+ +M  FV   NR L
Sbjct: 138 SGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRLL 197

Query: 574 WHPLYLYGTRCLRL 587
           W P+Y Y    LRL
Sbjct: 198 WRPMYAYAENKLRL 211



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P D +E + +FR+ GWQ +  + +P   P  V   + +  G W   
Sbjct: 86  WYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNAS 145

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE +  GDT +   G+G+YIA      D   I+  +  M   + L+++LL+RPM  ++
Sbjct: 146 IVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRLLWRPMYAYA 205

Query: 268 -NKFRLE 273
            NK RL+
Sbjct: 206 ENKLRLD 212


>gi|167909681|ref|ZP_02496772.1| putative transmembrane transporter [Burkholderia pseudomallei 112]
          Length = 266

 Score =  259 bits (663), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            C    V  GIA   +       ++ D+  V   G +T+ RV+VLI +A+++W+P G+ I
Sbjct: 29  LCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 86

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYILFNV
Sbjct: 87  GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 146

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE+  
Sbjct: 147 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 206

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 207 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 265



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205
           W + F++       P DL+E + S R+      W+  V  P  +P  V   + +  G W 
Sbjct: 140 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 197

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  
Sbjct: 198 ASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYA 257

Query: 266 WSNK 269
           ++ +
Sbjct: 258 FAER 261


>gi|167718236|ref|ZP_02401472.1| putative transmembrane transporter [Burkholderia pseudomallei DM98]
          Length = 277

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            C    V  GIA   +       ++ D+  V   G +T+ RV+VLI +A+++W+P G+ I
Sbjct: 40  LCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 97

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYILFNV
Sbjct: 98  GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 157

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE+  
Sbjct: 158 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 217

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 218 WGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 276



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205
           W + F++       P DL+E + S R+      W+  V  P  +P  V   + +  G W 
Sbjct: 151 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 208

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  
Sbjct: 209 ASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYA 268

Query: 266 WSNK 269
           ++ +
Sbjct: 269 FAER 272


>gi|167737268|ref|ZP_02410042.1| putative transmembrane transporter [Burkholderia pseudomallei 14]
          Length = 261

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            C    V  GIA   +       ++ D+  V   G +T+ RV+VLI +A+++W+P G+ I
Sbjct: 24  LCSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 81

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYILFNV
Sbjct: 82  GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 141

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE+  
Sbjct: 142 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 201

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 202 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 260



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205
           W + F++       P DL+E + S R+      W+  V  P  +P  V   + +  G W 
Sbjct: 135 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 192

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  
Sbjct: 193 ASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYA 252

Query: 266 WSNK 269
           ++ +
Sbjct: 253 FAER 256


>gi|167844449|ref|ZP_02469957.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 243

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            C    V  GIA   +       ++ D+  V   G +T+ RV+VLI +A+++W+P G+ I
Sbjct: 6   LCSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 63

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYILFNV
Sbjct: 64  GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYILFNV 123

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE+  
Sbjct: 124 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 183

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 184 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 242



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 59/122 (48%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W   
Sbjct: 117 WYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNAS 176

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  ++
Sbjct: 177 IVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFA 236

Query: 268 NK 269
            +
Sbjct: 237 ER 238


>gi|167917693|ref|ZP_02504784.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 257

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/238 (52%), Positives = 159/238 (66%), Gaps = 2/238 (0%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
           C    V  GIA   +       ++ D+  V   G +T+ RV+VLI +A+++W+P G+ IG
Sbjct: 21  CSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLIG 78

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYILFNVI
Sbjct: 79  LRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYILFNVI 138

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE+  W
Sbjct: 139 AGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVVW 198

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 199 GHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 256



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205
           W + F++       P DL+E + S R+      W+  V  P  +P  V   + +  G W 
Sbjct: 131 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 188

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  
Sbjct: 189 ASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYA 248

Query: 266 WSNK 269
           ++ +
Sbjct: 249 FAER 252


>gi|124516267|gb|EAY57775.1| putative binding-protein-dependent transport systems inner membrane
           component [Leptospirillum rubarum]
          Length = 577

 Score =  256 bits (653), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 283/543 (52%), Gaps = 41/543 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+ SLP   +R+ LR+ +A  ISL+F +VY  L A +R    +L+P+LDI+QSIP+LGF 
Sbjct: 44  DLASLPGDLARSVLRLFAAYFISLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLGFF 103

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +   ++L+   + G ELA++  I TS  WNM F++++S+   P + +E+    +  G
Sbjct: 104 PAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQAPG 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W +  Y  VP ++P +V+N ++S + GW+F++A EMI +G     L G+GS++ ++    
Sbjct: 164 WLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYRLRGLGSFLVVSTSSG 223

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA----------DSWVL 286
            +L  L  ++ ++  + L D  LFRP++VWS +F ++++  +             +S VL
Sbjct: 224 KILDALAGIVLLVVTVVLMDFFLFRPVVVWSQRFSIDQSASLAGETRSVFREWLMESDVL 283

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L R+                 LS+++      L  +   FP+ F          +   I
Sbjct: 284 ALPRRL----------------LSSSLTAGRAGLYALLRRFPKTF----PAGPDGHGRGI 323

Query: 347 F-WFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLG--------CITMFRVVVLIII 396
           F W   V G+A       +GY  V          V W G          +M R++   ++
Sbjct: 324 FRWVSPVLGMASLFLLSILGYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYLL 383

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           +    +PV  ++   P +   + P AQ++A+ PA   FP ++  V     + NL   LL+
Sbjct: 384 SLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLL 443

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G QWY+LFN++AGA  FPN+ +E A +  + G  + R I LP +FP  VTG+ITA GG
Sbjct: 444 LSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGG 503

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            WNA IVSE   +   +    G+GA++ + T   G+   +V+ +L++   V+ LNRF W 
Sbjct: 504 GWNALIVSEYVVYDQKNYSVRGIGAFLDKVTYGSGNEILIVVSLLMLTVVVVTLNRFFWT 563

Query: 576 PLY 578
           PLY
Sbjct: 564 PLY 566



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAF 475
           P   +L + P   FFP V+  + +   NP     L   +L+     W + F V       
Sbjct: 89  PLLDILQSIPVLGFFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTA 148

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P ++KE+       GW    Y ++P   P  V  +I +    W   I  E+ S G +H R
Sbjct: 149 PVEYKELLDGMQAPGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYR 208

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             GLG+++  ST  G   + + G++++   V+ ++ FL+ P+ ++  R
Sbjct: 209 LRGLGSFLVVSTSSGKILDALAGIVLLVVTVVLMDFFLFRPVVVWSQR 256



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 13/227 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  LP     + LR+L+  ++SL +T   A       RL   ++P+  +M S+P      
Sbjct: 363 LSELPLDMVYSMLRLLAGYLLSLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFP 422

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +V  +           LA+I  + +   W + F++       P +L E + +  + G 
Sbjct: 423 FIIVLVVR----TTHSMNLASILLLLSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGR 478

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQ 236
                + +PF  P +V   + +  GGW  ++ SE +V       + GIG+++  +     
Sbjct: 479 LFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKNYSVRGIGAFLDKVTYGSG 538

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
           + + I+ ++L +  V+   ++  + P+         ER T  Y  D 
Sbjct: 539 NEILIVVSLLMLTVVVVTLNRFFWTPLY--------ERVTSRYGLDG 577


>gi|148658632|ref|YP_001278837.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148570742|gb|ABQ92887.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 670

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/282 (51%), Positives = 196/282 (69%), Gaps = 3/282 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           DL+   LVI  I +L    Q  + P D     + ++L+  +LP Y  RT  RM  A+++S
Sbjct: 21  DLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPANLPYYGLRTVFRMFLAVLLS 80

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           LLFTF  ATLAAKSRR  +V++P LD +QS+PILGFLT T   F+ ++ G ++G E A+I
Sbjct: 81  LLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVTTAIFLGMFRGSLLGLEAASI 140

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FAIFTSQVWNM FS Y SL   PR+L+E +   RLS W+KFW L VPF+MPGL+WN MMS
Sbjct: 141 FAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKKFWKLEVPFAMPGLIWNTMMS 200

Query: 200 MSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SGGWFFVVASE+I VVG D    LPG+GSY+ LAI++ D+ A++YA LT+L +I +YDQ
Sbjct: 201 VSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQADVAAMVYAGLTLLIIILIYDQ 260

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
           L+FRP++ WS KF+ E++     A SW+L L +++     +G
Sbjct: 261 LIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGIASSLG 302



 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/255 (45%), Positives = 152/255 (59%), Gaps = 11/255 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++  ++RV    D+   C    V  G             ++ +VL  +WLG +T  RVV+
Sbjct: 426 EVLRDERVGAPGDLAAACATPMVPAG-----------KVSWSEVLECLWLGLLTTMRVVI 474

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            I I++++W P+G+WIG RP ++  +QP AQ  AAFPAN+ FP+ V  ++ Y L  NL+ 
Sbjct: 475 WIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPANLLFPIAVVLIATYALPQNLFQ 534

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + LMI G QWYILFNVIAG  + PND KE A    + GW WWR +I+P IFP +VTG IT
Sbjct: 535 APLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLIIPAIFPAFVTGGIT 594

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GG+WNASIVSEV SWG   L  TGLGAYIA  +     P V LG+L+M   VL  NR 
Sbjct: 595 ASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGMLVMGLLVLGFNRL 654

Query: 573 LWHPLYLYGTRCLRL 587
            W  LY       RL
Sbjct: 655 FWRRLYALAETRFRL 669



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++     +IP DL+E +R   L GW  +  L +P   P  V   + +  G W   
Sbjct: 544 WYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLIIPAIFPAFVTGGITASGGSWNAS 603

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE++  G T + L G+G+YIA     +    +   ML M  ++  +++L +R +   +
Sbjct: 604 IVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGMLVMGLLVLGFNRLFWRRLYALA 663

Query: 268 N-KFRLE 273
             +FRL+
Sbjct: 664 ETRFRLD 670


>gi|308180844|ref|YP_003924972.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308046335|gb|ADN98878.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 454

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 256/472 (54%), Gaps = 34/472 (7%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           M L+P  V+G E  AIF +FT+Q WN+  ++YQSL   P DL  V++ F  + WQ+FW L
Sbjct: 1   MGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRL 60

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
              ++ P ++WN+++S S  WF +VA E   ++V  +  + LPGIGSYI +A+   +  A
Sbjct: 61  EFLYATPSILWNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGA 120

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY-PADSWV--LYLFRKTNFL-- 295
           ++ A++ ++  + L +  +F+P+I  +  ++   +T    P  S V  L +  K   L  
Sbjct: 121 VINAVIALVICVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVK 180

Query: 296 ---RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              R I Y  W + +P      K  + LG  R       +++     V + +  +W  + 
Sbjct: 181 RLHRHIRY-WWLYGAP------KQWQKLGFSR------IIRILKKYTVYWRIA-WWLVIA 226

Query: 353 CGV-AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
            G+  +G+       ++ +  + ++  +     +T  RV++ ++++++I+IP+ +W+   
Sbjct: 227 VGLYRLGV------LLIKYLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASN 280

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 IQP  Q+L + PA+++ P+V   ++      + W+  L++ GTQWY  FN+IAG
Sbjct: 281 ARRLKLIQPVGQVLGSIPADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAG 340

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D K+V + FH++GWRWW + ++P +FP ++T  I A G AWNA I +E+ SWG 
Sbjct: 341 YLAIPSDIKDVVNIFHLSGWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGT 400

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                TGLGAYIA++      P    GVLI+C  V      +W PLY +  R
Sbjct: 401 HQYAVTGLGAYIAQNINNK--PAEATGVLIICVIVGLCVVLIWQPLYRFAER 450


>gi|206603108|gb|EDZ39588.1| Putative transmembrane transporter [Leptospirillum sp. Group II
           '5-way CG']
          Length = 577

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/543 (31%), Positives = 286/543 (52%), Gaps = 41/543 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+ SLP   +R+ LR+ +A  +SL+F +VY  L A +R    +L+P+LDI+QSIP+LGF 
Sbjct: 44  DLASLPGDLARSVLRLFAAYFLSLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLGFF 103

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +   ++L+   + G ELA++  I TS  WNM F++++S+   P + +E+    +  G
Sbjct: 104 PAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQAPG 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W +  Y  VP ++P +V+N ++S + GW+F++A EMI +G     L G+GS++ ++    
Sbjct: 164 WLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQLRGLGSFLVVSTSSG 223

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA------------DSW 284
            +L  L  ++ ++  + L D  LFRP++VWS +F ++++    PA            +S 
Sbjct: 224 KILDALAGIVLLVVTVVLMDFFLFRPIVVWSQRFSIDQSAS--PAGETRSIFREWLMESN 281

Query: 285 VLYLFRK--TNFLRFIGYSSWNFFS--PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340
            L L R+  ++ L     S + F    P++          GV R+  P   L + S    
Sbjct: 282 ALALSRRVLSSLLEAAMASLYAFLRRLPIAFPPGPDGNGRGVFRWVSP--VLGVSS---- 335

Query: 341 SYMLDIFWFCVVC----GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            ++L I  +  V      +A G+ W  +  +     Y            +M R++    +
Sbjct: 336 LFLLGILAYSGVESMKRALASGVPWDGLSELPLDMVY------------SMLRLLAGYFL 383

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           +    +PV  ++   P +   + P AQ++A+ PA   FP ++  V     + NL   LL+
Sbjct: 384 SLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLL 443

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G QWY+LFN++AGA  FPN+ +E A +  + G  + R I LP +FP  VTG+ITA GG
Sbjct: 444 LSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGG 503

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            WNA IVSE   +   +    G+GA++   T   G+   +V+ +L++   V+ LNRF W 
Sbjct: 504 GWNALIVSEYVVYDQKNYSVRGIGAFLDRVTYGSGNEILIVVSLLMLTVVVVTLNRFFWT 563

Query: 576 PLY 578
           PLY
Sbjct: 564 PLY 566



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAF 475
           P   +L + P   FFP V+  + +   NP     L   +L+     W + F V       
Sbjct: 89  PLLDILQSIPVLGFFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTA 148

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P ++KE+       GW    Y ++P   P  V  +I +    W   I  E+ S G +H +
Sbjct: 149 PVEYKELLDGMQAPGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQ 208

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             GLG+++  ST  G   + + G++++   V+ ++ FL+ P+ ++  R
Sbjct: 209 LRGLGSFLVVSTSSGKILDALAGIVLLVVTVVLMDFFLFRPIVVWSQR 256



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 9/206 (4%)

Query: 28  VIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           V+G+ ++ L GI       ++ R +   VP    +  LP     + LR+L+   +SL +T
Sbjct: 330 VLGVSSLFLLGILAYSGVESMKRALASGVPWD-GLSELPLDMVYSMLRLLAGYFLSLCWT 388

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A       RL   ++P+  +M S+P      F +V  +           LA+I  + 
Sbjct: 389 VPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVR----TTHSMNLASILLLL 444

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +   W + F++       P +L E + +  + G      + +PF  P +V   + +  GG
Sbjct: 445 SGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGG 504

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYI 229
           W  ++ SE +V       + GIG+++
Sbjct: 505 WNALIVSEYVVYDQKNYSVRGIGAFL 530


>gi|170290357|ref|YP_001737173.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174437|gb|ACB07490.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 541

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 183/541 (33%), Positives = 297/541 (54%), Gaps = 39/541 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA  + LRM+ A + SL+F+     LAAK+ +   +++P+LD++QS+PIL FL   +
Sbjct: 18  LPVYALLSLLRMIIAYLFSLIFSLSIGILAAKNEKAEHIIIPLLDVLQSVPILSFLPIAI 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F+NL+ G  IGAE+++IF IFTSQVWNMTF +Y+++  IPRDLEE+ R +R+    KF
Sbjct: 78  IFFINLF-GPYIGAEISSIFLIFTSQVWNMTFGVYEAVKLIPRDLEEMVRVYRIG---KF 133

Query: 181 WYLG---VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            YL    +P +M  L++N  MS  GGWFF+ ASE+I +G+  IPLPGIGS +AL++ E  
Sbjct: 134 LYLRKILLPATMTKLIYNSAMSWGGGWFFLYASEIISLGNAQIPLPGIGSLLALSLAESP 193

Query: 238 ---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
               +AIL  ++TM  V F Y   ++RP++ WS  F+ E + G          + RK  F
Sbjct: 194 PRIDIAILSVLITMFLVSFTY-LFIWRPLMEWSENFKYEYSAG---------EIKRKRVF 243

Query: 295 ----LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
               +R   +   +FF  L   ++   R        F E    +   ++ +++L I +  
Sbjct: 244 EIPRVRIPPFLYRSFFRSLRYILRLPIRNYVAGFVSFVERRAGII--KKGTFLLLILF-- 299

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-IPVGIWIG 409
            +   A+ IA   I   +    Y     +I +  +   R V+ +++ S+ W IPV + +G
Sbjct: 300 -IAYSAMKIA-PHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVSLLVG 357

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM--IFGTQWYILFN 467
              H    +  F ++ A+FP  V +P +V  +     +    ++ +M  +FG Q+Y+LFN
Sbjct: 358 RGRHWDEFMLLF-EIAASFPIPVLWPFLVKYIVLPLGDEGFEIAAIMLALFGAQFYVLFN 416

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +AG  +  +D +E+   F I G  + R +++PG+FP  VTG ITA GGAWN+ IV+E  
Sbjct: 417 SLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSLIVAEYI 476

Query: 528 SWGHIHLRTT----GLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
             G+    +     GLG  ++ +  ++G    V+    ++   V+ +NR  W  LY Y  
Sbjct: 477 KVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRFLYDYSA 536

Query: 583 R 583
           +
Sbjct: 537 K 537



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+ ++ISL +T   + L  + R     ++ + +I  S PI     F V Y +   P  
Sbjct: 337 RVLTVLLISLSWTIPVSLLVGRGRHWDEFML-LFEIAASFPIPVLWPFLVKYIV--LPLG 393

Query: 131 VIGAELAAI-FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             G E+AAI  A+F +Q + + F+    + +I  DLEE+ + F + G      L +P   
Sbjct: 394 DEGFEIAAIMLALFGAQFY-VLFNSLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMF 452

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQ-DLLAILYA 244
           P +V  ++ +  G W  ++ +E I VG+ V P      G+G+ +++A  ++ D+ ++++ 
Sbjct: 453 PSIVTGLITAWGGAWNSLIVAEYIKVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFI 512

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              +  ++   ++  +R +  +S KFR+E
Sbjct: 513 TAVLTLIVITVNRAFWRFLYDYSAKFRVE 541


>gi|297567837|ref|YP_003686808.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946]
 gi|296852286|gb|ADH65300.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946]
          Length = 671

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/303 (49%), Positives = 200/303 (66%), Gaps = 18/303 (5%)

Query: 13  RRIFPNI--------FDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDV 58
           RR+FP+         F     V++ G++ +L      L G  E   P      + ++LD 
Sbjct: 2   RRVFPSPEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTS--PNLTVSLDP 59

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP Y  RT LRML+A+++SL+FTFVYAT+AAK  R   VL+PILD +QS+PILGFLT 
Sbjct: 60  AHLPYYGLRTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTA 119

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T   F+ L+ G + G E A+IFAIFTSQVWNMTFS Y SL  +P++L+E +   RLS WQ
Sbjct: 120 TTSIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQ 179

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIALAIKEQ 236
           +FW L VPF++P LVWN MMS+SGGWFFVVASE I VVG D    LPG+GSYIALAI++ 
Sbjct: 180 RFWKLEVPFALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQA 239

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
           +  A+LYA +T+  ++ LYDQL FRP++ W+ KF+ E++     A SWVL L ++    +
Sbjct: 240 NTHAMLYAGVTLFLLVLLYDQLFFRPIVAWAEKFKFEQSESSDTAQSWVLTLLKRARLSQ 299

Query: 297 FIG 299
            I 
Sbjct: 300 RIA 302



 Score =  220 bits (560), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/220 (48%), Positives = 141/220 (64%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               ++ +V  V+  G  T  RV   +++ +++W+PVG++IG RP ++   QP AQ  AA
Sbjct: 451 AGKVSWPEVPEVLKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAA 510

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FPL V  ++++ LNP +W+S LM+ G QWYILFNVIAG  A PND KE A  + 
Sbjct: 511 FPANLLFPLFVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYR 570

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW  WR ++LP IFP +VTG ITA GG+WNASIV+EV  WG+  L  TGLGAYIA  +
Sbjct: 571 LRGWGLWRRLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWS 630

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                P V LG+L+M   VLA NR +W  LY       RL
Sbjct: 631 TGEFNPHVGLGMLVMGLLVLAYNRLIWRRLYQLAEERYRL 670



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++      IP DL+E +R +RL GW  +  L +P   P  V   + +  G W   
Sbjct: 545 WYILFNVIAGTVAIPNDLKEAARMYRLRGWGLWRRLLLPAIFPAFVTGGITATGGSWNAS 604

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VW 266
           + +E++  G+T +   G+G+YIA     +    +   ML M  ++  Y++L++R +  + 
Sbjct: 605 IVAEVVRWGNTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLLVLAYNRLIWRRLYQLA 664

Query: 267 SNKFRLE 273
             ++RL+
Sbjct: 665 EERYRLD 671



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510
           S+  IF +Q W + F+  A     P + +E A+   ++ W R+W+ + +P   P+ V  A
Sbjct: 139 SIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQRFWK-LEVPFALPHLVWNA 197

Query: 511 ITACGGAWNASIVSEVASW-GHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           + +  G W   + SE  +  G    +   G+G+YIA + ++ +   ++   + +   VL 
Sbjct: 198 MMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQANTHAMLYAGVTLFLLVLL 257

Query: 569 LNRFLWHPLYLYGTR 583
            ++  + P+  +  +
Sbjct: 258 YDQLFFRPIVAWAEK 272


>gi|251772337|gb|EES52905.1| probable binding-protein-dependent transport systems inner membrane
           component [Leptospirillum ferrodiazotrophum]
          Length = 571

 Score =  244 bits (623), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 170/537 (31%), Positives = 275/537 (51%), Gaps = 35/537 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+  LP     + +R+  A ++SL F + Y   AA +R    +L+P+LDI+QSIP+LGF 
Sbjct: 44  DLRDLPGDILHSLVRLFLAYLLSLSFAYAYGLAAALTRLGPRLLIPVLDILQSIPVLGFF 103

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V+  + L+P   +G E A+I  I TS  WNM F++Y+S+   P +L ++ R  R   
Sbjct: 104 PAVVLVMVPLFPTTHMGVEAASIVLIATSMAWNMAFAVYESVRTAPPELTDLFRGIRAPA 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W       VP ++P +V+N ++S + GW+F++A EMI +G     LPG+GS++  + ++ 
Sbjct: 164 WLWALRFLVPVTLPKVVYNSVLSWTAGWYFLIACEMIALGPVHYELPGLGSFLVGSTEKG 223

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
                L  +  ++  + + D L+FRP + WS+ FRL       P  S  +Y         
Sbjct: 224 HFGEALLGIGALVVTVMILDLLVFRPFLAWSHNFRLGEVESHTPRISSPVY--------D 275

Query: 297 FIGYSSW--NFFSPLSNNVKKLCRTLGVI-----RFHFPENFLQLCSNQRVSYMLDIFWF 349
            +  SSW   F S +S+      R +  +      F        L       +   +F  
Sbjct: 276 LLAGSSWLGQFRSSVSDMAAGFFRRISRVPRRRQTFRDSSALRLLGLLLLGFFGGYLFTE 335

Query: 350 CVVCGVAI-------GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            +  GV +       GI W+S+  +       D+LY       +  R+VV  +++ +  +
Sbjct: 336 SLYAGVRVVTGWINQGIPWRSLAELP-----ADLLY-------SSLRLVVAYLLSLLWTL 383

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PV  W+   P +S  + P A+++A+ PA   FP V+  V  +  + NL   LL++ G QW
Sbjct: 384 PVAYWVFRTPRLSRIVFPLAEIMASVPATALFPFVIVLVVTHLHSMNLASILLLMSGMQW 443

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y+LFN+++G   FP + +EV+ +F I    + R + LP + P  VTG+ITA GG WNA I
Sbjct: 444 YLLFNLLSGVGTFPAELREVSLTFGIRQGLFIRKVFLPFLLPSLVTGSITAFGGGWNALI 503

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-VVLGVLIMCCFVLALNRFLWHPLY 578
           VSE   +        GLGA++  +T +G+ P  +V  +L+M   V+A NRF W PLY
Sbjct: 504 VSEYVVYAKKDYGVDGLGAFLDRATYQGAHPVLIVAALLVMTAAVVAANRFFWIPLY 560



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LP     ++LR++ A ++SLL+T   A    ++ RL  ++ P+ +IM S+P      F 
Sbjct: 359 ELPADLLYSSLRLVVAYLLSLLWTLPVAYWVFRTPRLSRIVFPLAEIMASVPATALFPFV 418

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V  +      +    LA+I  + +   W + F++   +   P +L EVS +F +     
Sbjct: 419 IVLVVT----HLHSMNLASILLLMSGMQWYLLFNLLSGVGTFPAELREVSLTFGIRQGLF 474

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI-KEQDL 238
              + +PF +P LV   + +  GGW  ++ SE +V       + G+G+++  A  +    
Sbjct: 475 IRKVFLPFLLPSLVTGSITAFGGGWNALIVSEYVVYAKKDYGVDGLGAFLDRATYQGAHP 534

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
           + I+ A+L M   +   ++  + P+         ER T  Y  D+
Sbjct: 535 VLIVAALLVMTAAVVAANRFFWIPLY--------ERVTQRYSYDA 571


>gi|291295407|ref|YP_003506805.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290470366|gb|ADD27785.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 671

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/248 (55%), Positives = 180/248 (72%), Gaps = 2/248 (0%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++L+   LP Y  RT LRML+A+++SL FT VYAT+AAK  R   VL+P+LD +QS+PIL
Sbjct: 55  VSLNPAHLPYYGLRTLLRMLAALLLSLAFTLVYATIAAKVPRTERVLIPLLDFLQSLPIL 114

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GFLT T   F+ L+ G + G E A+IFAIFTSQVWNMTFS Y SL  +PR+L+E +   R
Sbjct: 115 GFLTATTAIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPRELQEAAAMLR 174

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIAL 231
           LS WQ+FW L VPF +P LVWN MMS+SGGWFFVVASE+I VVG D    LPG+G+YIAL
Sbjct: 175 LSPWQRFWKLEVPFGLPNLVWNAMMSVSGGWFFVVASEVISVVGRDQDQYLPGVGAYIAL 234

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           AI++ D  A+L+A LT+  ++ LYDQLLFRP++ W+ KF+ E++     A SWVL L ++
Sbjct: 235 AIQQADAQAMLWAGLTLFLLVLLYDQLLFRPVVAWAEKFKFEQSESSDTAQSWVLTLLQR 294

Query: 292 TNFLRFIG 299
             F + I 
Sbjct: 295 ARFSQRIA 302



 Score =  224 bits (571), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/220 (48%), Positives = 143/220 (65%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                + +VL V  LG  T  RV   +++ ++IW+P+G+++G RP ++  +QP AQ  AA
Sbjct: 451 AGKVAWPEVLEVFKLGFFTALRVTFFVLLVTLIWLPIGVYVGLRPRLTQWVQPLAQFGAA 510

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FPL V  ++++ LNP +W+S LM+ G QWYILFN IAG++A PND KE A  + 
Sbjct: 511 FPANLLFPLFVVAIAHFRLNPEIWVSPLMVLGGQWYILFNAIAGSAAIPNDLKEAARLYG 570

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW  WR +ILP IFP +VTG ITA GG+WNASIV+EV  WG   L  TGLGAYIA  +
Sbjct: 571 LRGWNRWRRLILPAIFPAFVTGGITATGGSWNASIVAEVVQWGDTTLVATGLGAYIARWS 630

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                P V LG+L+M  +VLA NR +W  LY       RL
Sbjct: 631 TGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLAEERYRL 670



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F+       IP DL+E +R + L GW ++  L +P   P  V   + +  G W   
Sbjct: 545 WYILFNAIAGSAAIPNDLKEAARLYGLRGWNRWRRLILPAIFPAFVTGGITATGGSWNAS 604

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VW 266
           + +E++  GDT +   G+G+YIA     +    +   ML M   +  Y++L+++ +  + 
Sbjct: 605 IVAEVVQWGDTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLA 664

Query: 267 SNKFRLE 273
             ++RL+
Sbjct: 665 EERYRLD 671


>gi|224456411|ref|ZP_03664884.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis MA00-2987]
          Length = 330

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 180/291 (61%), Gaps = 6/291 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTL 70
            +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+
Sbjct: 9   KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  
Sbjct: 69  RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+P
Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247
           GL+WN+M+S S  WF + ASE I  + GD  + LPGIGSYIAL + + +++AI  YA++ 
Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALGLTDSNIIAIFFYALVA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
           ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I
Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAI 297


>gi|167010888|ref|ZP_02275819.1| ABC transporter permease protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254366877|ref|ZP_04982915.1| ABC transporter, permease protein [Francisella tularensis subsp.
           holarctica 257]
 gi|134252705|gb|EBA51799.1| ABC transporter, permease protein [Francisella tularensis subsp.
           holarctica 257]
          Length = 396

 Score =  219 bits (559), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 105/255 (41%), Positives = 165/255 (64%), Gaps = 5/255 (1%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D   +  I+LD   LP Y  RTT+R++  M+ SL+F  +     AK++    V +PI++ 
Sbjct: 27  DASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINF 86

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S P+LGFLTFT  +F+ L+P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L 
Sbjct: 87  LESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELT 146

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPG 224
           E   +F+L+ WQ+FW + +P+S+PGL+WN+M+S S  WF + ASE I  + GD  + LPG
Sbjct: 147 EAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPG 204

Query: 225 IGSYIALAIKEQDLLAI-LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
           IGSYIAL + + +++AI  YA++ ++  I L+DQLLFRP++ WS KF+ E        + 
Sbjct: 205 IGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNP 264

Query: 284 WVLYLFRKTNFLRFI 298
           W+   ++K+  +  I
Sbjct: 265 WLYRSYKKSQLVNAI 279


>gi|325519249|gb|EGC98700.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 187

 Score =  219 bits (558), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 105/170 (61%), Positives = 133/170 (78%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 187


>gi|315427282|dbj|BAJ48894.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 517

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 254/523 (48%), Gaps = 48/523 (9%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM +A+++S+LF+ V  T A  ++    V VP+LDI+QSIPILGF    +  F    P 
Sbjct: 19  LRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYAASP- 77

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            V GAELAAIF IFTSQVWN+TF++Y+S   I  +L +V+ S R+S +++F ++ +P  +
Sbjct: 78  -VFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPACL 136

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +V N   S + G FF+V +E++  GD  + L G+G+ ++      DLL I+  +L ++
Sbjct: 137 PRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLVLV 196

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFF 306
               + + L+F P+      F    T G  P      + F K     F   +     +FF
Sbjct: 197 AATIMVNFLVFIPL---GTMF---ETAGPPPPGLLRRFAFIKKLAKPFQTTLATPVISFF 250

Query: 307 ------SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                 S L N V  L   +  + F     FL   +  R +                G  
Sbjct: 251 EYQRSVSGLVNRVSVLGSLVRNLIFLILIGFLATLAITRGNEFF-------------GSL 297

Query: 361 WQSIGYI-VNHFTYQDVL-YVIWLGCITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSK 417
           +Q++G + V++     V  +V  +G +            S+ W IP  + I  RP +S+ 
Sbjct: 298 YQTLGRVGVDNLLSSAVFSFVRVMGAVGF----------SVAWSIPAAVAIARRPQLSTA 347

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +    Q++A+ P  + +PL    +      P L   ++++  TQWY+ F V+AG    P 
Sbjct: 348 VTTVFQVVASIPVTIVYPLFAETLKD---QPELRAFVMILAATQWYVFFQVLAGLKNIPR 404

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              EVA    +  W   R + LP   P  +TG ITA GGAWN  +V+E    G +   T 
Sbjct: 405 SELEVADMLQLKTWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETD 464

Query: 538 --GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             GLG  +++ T  G     V  +++M   V+ +NRF W  LY
Sbjct: 465 LPGLGKLLSQLTYAGDLLGSVSVLIVMSSIVVLMNRFFWKKLY 507



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 14/221 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V +L   A  + +R++ A+  S+ ++   A   A+  +L   +  +  ++ SIP+     
Sbjct: 306 VDNLLSSAVFSFVRVMGAVGFSVAWSIPAAVAIARRPQLSTAVTTVFQVVASIPV----- 360

Query: 118 FTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            T+VY  F      +    EL A   I  +  W + F +   L NIPR   EV+   +L 
Sbjct: 361 -TIVYPLFAETLKDQ---PELRAFVMILAATQWYVFFQVLAGLKNIPRSELEVADMLQLK 416

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV--IPLPGIGSYIALAI 233
            W +   + +P ++P L+   + +  G W  +V +E +V+GD V    LPG+G  ++   
Sbjct: 417 TWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETDLPGLGKLLSQLT 476

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VWSNKFRLE 273
              DLL  +  ++ M  ++ L ++  ++ +  + ++K ++E
Sbjct: 477 YAGDLLGSVSVLIVMSSIVVLMNRFFWKKLYDLVASKLKIE 517



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 6/197 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R+   +I++ +  I VG   G          P   +L + P   FFP+ +    +Y
Sbjct: 16  VSFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQV--FY 73

Query: 445 HLNPNLWLSL---LMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             +P     L    +IF +Q W I F V         +  +VA+S  ++ +  +R+I LP
Sbjct: 74  AASPVFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLP 133

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V     +        + +E+ ++G + L+  G+G  ++E    G    ++  +L
Sbjct: 134 ACLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLL 193

Query: 561 IMCCFVLALNRFLWHPL 577
           ++    + +N  ++ PL
Sbjct: 194 VLVAATIMVNFLVFIPL 210


>gi|325527631|gb|EGD04934.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. TJI49]
          Length = 186

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 103/170 (60%), Positives = 132/170 (77%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           AELAAIFAIFTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186


>gi|119718931|ref|YP_919426.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
 gi|119524051|gb|ABL77423.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
          Length = 497

 Score =  183 bits (465), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 265/520 (50%), Gaps = 48/520 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S +  RM  A ++SLL   V  +L A+++ +  +++P+LDI+QSIPILGF    +  F+ 
Sbjct: 9   SASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFPAALAMFIA 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P + +G E AA+F I TS VWNM F +Y S+ ++   + +++R + L    +F+Y+ V
Sbjct: 69  NLP-RALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVSRFFYIYV 127

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S   L+ N ++S +GGWFF+ A+E+I +G+    L GIG++I  +    D     YA 
Sbjct: 128 PASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGD-----YAS 182

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
              +GV  L+  ++   +++W+   +  R   + P+ S                     F
Sbjct: 183 F-YIGVAALFATIMATYVLLWNPAVKSVRDLPL-PSVS--------------------AF 220

Query: 306 FSPLSNNVKKLCRTLGVI------RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           +   S  V ++   LG        R   P    ++      + +L +  F +  GVA  +
Sbjct: 221 YEKFSEVVSRVWSGLGEALVWVEARVKLPGFVPRVVG----ATLLVVALFYLGSGVAGLL 276

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           +   +G +   F ++  L +  +  + +F +V+ ++IA + +        FR   +  I 
Sbjct: 277 SLDVVG-VAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTY-------SFR-RAAMLIG 327

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPND 478
              +LLA+ PA +++PL+      +   P + L  +++ G+ WY+ FN++  G  +   +
Sbjct: 328 ASGELLASVPAIIWWPLLGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKE 387

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +E+A+ + + GW ++R I  P +FP  +TGA+++ GGAWNA+I +E  + G   +   G
Sbjct: 388 HEELAAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGG 447

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +GA +   T +G   +  L  L +   ++A+++ +W  L+
Sbjct: 448 VGALLNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLF 487



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 52/289 (17%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           LP F+ R +   +  +  F L  G+  +L           D+V +    L  H LP   +
Sbjct: 248 LPGFVPRVVGATLLVVALFYLGSGVAGLL---------SLDVVGVAKSFL--HELPLSLA 296

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ILGFLTFT- 119
           R ++ ++ ++V+SLL  ++  +     RR  M++    +++ S+P      +LG++  T 
Sbjct: 297 RVSIVLVFSLVLSLLIAYLTYSF----RRAAMLIGASGELLASVPAIIWWPLLGYVALTF 352

Query: 120 -----VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFR 173
                VV F  L  G                 +W + F++    L +I ++ EE++  + 
Sbjct: 353 SWGPLVVLFTVLLQG----------------SLWYLYFNILVFGLGSIRKEHEELAAVYG 396

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           + GW  F  +  P   P L+   + S  G W   +A+E + +G   I L G+G+ +    
Sbjct: 397 VKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGGVGALLNRYT 456

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD 282
            E +      A  T L  +FL   ++     VW+  F   R +G +  +
Sbjct: 457 VEGE------AGKTALAALFLSLVIVAVDKAVWARLF--SRLSGKFAGE 497


>gi|116334711|ref|YP_796238.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
 gi|116100058|gb|ABJ65207.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
          Length = 264

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 138/240 (57%), Gaps = 7/240 (2%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +++F + C + +G+    IG++  +  + +   +IW   +T  RV+  ++++++I+IP
Sbjct: 28  LTLWYFSLGCAM-VGL----IGFLATYLKWLNWQTLIWWTLLTTGRVLAAVVLSALIFIP 82

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + +W+   P   ++IQP+ Q++ + PA+V+ P+V   +         W+  L++ GTQWY
Sbjct: 83  LAVWVASNPRRLNRIQPWGQVIGSIPADVYVPVVALLIVATGTTHQWWVIPLIMTGTQWY 142

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
             FNVIAG  A P D +EV   FH+ GWRWW   + P +FPY +T  I A G AWNA I 
Sbjct: 143 FFFNVIAGYLAIPADIQEVTQVFHLKGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIA 202

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +E+ +WG       GLGAYIA +T+    P    GVLI+C  V     F+W PLY +  R
Sbjct: 203 AELITWGTKQFSVAGLGAYIAGNTDNK--PAEATGVLIICGLVGICVIFIWQPLYRFAER 260



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           L+  +L  +   TT R+L+A+V+S L+F  +   +A+  RRL  +  P   ++ SIP   
Sbjct: 53  LNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAVWVASNPRRLNRI-QPWGQVIGSIPADV 111

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   VV  + +  G     +   I  I T   W   F++      IP D++EV++ F L
Sbjct: 112 YVP--VVALLIVATGTT--HQWWVIPLIMTGTQWYFFFNVIAGYLAIPADIQEVTQVFHL 167

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
            GW+ +     P   P L+  ++ +    W   +A+E+I  G     + G+G+YIA
Sbjct: 168 KGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAELITWGTKQFSVAGLGAYIA 223


>gi|325529732|gb|EGD06588.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia sp. TJI49]
          Length = 115

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 78/109 (71%), Positives = 95/109 (87%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+LD  +LP+YA RTTLRML+AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+L
Sbjct: 7   ISLDPSNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           GF++FTV +F+ L+PG+V+GAELAAIFAIFTSQ WNMTFS YQSL  +P
Sbjct: 67  GFISFTVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVP 115


>gi|209516010|ref|ZP_03264870.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
 gi|209503470|gb|EEA03466.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
          Length = 148

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 102/132 (77%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLSYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTS 145
           AELAAIFAIFTS
Sbjct: 137 AELAAIFAIFTS 148


>gi|209521333|ref|ZP_03270048.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
 gi|209498218|gb|EDZ98358.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
          Length = 148

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/134 (57%), Positives = 101/134 (75%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+ PN +D +AF L+I +I +   G  +T  P   +    I+LD   LP+YA RTTLR
Sbjct: 15  ARRLLPNAWDFIAFPLIICLIAMASIGFHQTLAPMSTLKTQVISLDPAHLPEYAMRTTLR 74

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML+AMV SL+FT  Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V
Sbjct: 75  MLAAMVASLVFTLTYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFLALFPGRV 134

Query: 132 IGAELAAIFAIFTS 145
           +GAELAAIFAIFTS
Sbjct: 135 LGAELAAIFAIFTS 148


>gi|224456410|ref|ZP_03664883.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. tularensis MA00-2987]
          Length = 245

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 118/208 (56%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA P 
Sbjct: 28  FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQ 87

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            +FFP+V   +     + N+W   L++ GT +Y+LFNVI+G S  P +  E+  SFH+ G
Sbjct: 88  PIFFPIVAVLILAGDGSLNVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKG 147

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T   
Sbjct: 148 LKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 207

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLY 578
              +  L V+ +C  V     F+W PLY
Sbjct: 208 QLHDAALAVVALCSLVALCIIFIWKPLY 235



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 4/197 (2%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TT+R+  AM+IS+            S +    + PI+ I  +IP   F  F +V  + L
Sbjct: 42  ETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF--FPIVAVLIL 99

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +   +  I  I T   + + F++     N+P ++ E+++SF L G + ++   +P
Sbjct: 100 AGDGSL--NVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIP 157

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P +V  ++ +  G W   +A+E+++ G   I + GIG+ ++       L     A++
Sbjct: 158 AVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLHDAALAVV 217

Query: 247 TMLGVIFLYDQLLFRPM 263
            +  ++ L    +++P+
Sbjct: 218 ALCSLVALCIIFIWKPL 234


>gi|206895688|ref|YP_002246654.1| ABC transporter, permease protein [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738305|gb|ACI17383.1| ABC transporter, permease protein [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 499

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 137/227 (60%), Gaps = 2/227 (0%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+  A  +SL F   Y   A+   R   +++ ILDI+QS+PILGF    + +F+ ++
Sbjct: 10  STYRIFVAYFLSLAFGIFYGVSASSGPRREKIMIAILDILQSVPILGFFPVAIAFFVAVF 69

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+ IG ELAAIF IFTSQ WN+ F +Y+++  +PR+L EV ++F  S       + +P 
Sbjct: 70  RGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRELVEVGKAFNFSKTFTIQRIYLPA 129

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +V+N  +SM+ GW+F++ASE+I +G   + LPG+GS +   + + ++L ++  + T
Sbjct: 130 MVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPGLGSSMMNYLAQGNILGVVMCIGT 189

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKT 292
           ++ +  L   L+FRP++ WS  F+     T   +P  + VL+ F K 
Sbjct: 190 IVLINALLQVLIFRPLVKWSELFQYNAVGTAPEWPTVADVLFDFGKA 236



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 6/165 (3%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-LLMIFGTQWYILFNVIAGAS 473
           +  I   A +L + PA VF+P +V+     ++ P   LS LL++ G+ WY LFN+  GA 
Sbjct: 329 AQNIYSLASILGSIPAVVFYPPIVALGGRAYMEP---LSILLLLTGSFWYALFNMSKGAM 385

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P    E+A  F+I GW +++ I++P I P  +TGA+TA GGAWNASIV+E   +G   
Sbjct: 386 LLPGVLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKV 445

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
               G+GA + +ST       ++L VL M   ++ +N   W P Y
Sbjct: 446 YSIPGIGALLVQSTADTK--ALLLIVLSMTALIVLVNMLFWRPWY 488



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P +I+  +P  L V         TT+R+++A+VI++L    +   + K+      +  + 
Sbjct: 286 PSNILSQIPAALTV---------TTMRVVAAVVIAVLLALPFVIRSVKNVAAAQNIYSLA 336

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I+ SIP + F    V      Y       E  +I  + T   W   F+M +    +P  
Sbjct: 337 SILGSIPAVVFYPPIVALGGRAY------MEPLSILLLLTGSFWYALFNMSKGAMLLPGV 390

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E+++ F + GW  +  + +P  +P L+   + +  G W   + +E +  GD V  +PG
Sbjct: 391 LTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKVYSIPG 450

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           IG+   L     D  A+L  +L+M  +I L + L +RP
Sbjct: 451 IGAL--LVQSTADTKALLLIVLSMTALIVLVNMLFWRP 486



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 8/155 (5%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF----GTQWYILFNVIAGASAFPND 478
            +L + P   FFP+ ++          + L L  IF       W I F V       P +
Sbjct: 47  DILQSVPILGFFPVAIAFFVAVFRGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRE 106

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             EV  +F+ +     + I LP + P  V  +  +    W   + SE+ + G   ++  G
Sbjct: 107 LVEVGKAFNFSKTFTIQRIYLPAMVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPG 166

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG+ +     +G+    +LGV++    ++ +N  L
Sbjct: 167 LGSSMMNYLAQGN----ILGVVMCIGTIVLINALL 197


>gi|116334712|ref|YP_796239.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
 gi|116100059|gb|ABJ65208.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
          Length = 282

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 128/209 (61%), Gaps = 5/209 (2%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L + A RT  R+   M+ SL F+ V+  +AA+ +     ++P++++++S+P+ GFLTFT
Sbjct: 27  QLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLESVPLRGFLTFT 86

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +FM  +P  V+G E  AIF +FT+Q WN+   +YQSL   P++L  V+  F  + WQ+
Sbjct: 87  TAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTVADPFGCNSWQR 146

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG----DTVIPLPGIGSYIALAIKE 235
           FW L   +++PG++WNM++S S  WF +VA E   V     +T+I LPGIGSYI +A+  
Sbjct: 147 FWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLI-LPGIGSYIQIALDR 205

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
               A+  A+  +L  +   +  LF+P+I
Sbjct: 206 SKFGAVAAALGALLVCVLFTNVCLFQPLI 234


>gi|330834718|ref|YP_004409446.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera cuprina Ar-4]
 gi|329566857|gb|AEB94962.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera cuprina Ar-4]
          Length = 536

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 216/468 (46%), Gaps = 26/468 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+   +++S++  +  A  A K+R    + V + ++++S+P++ F    +++F    
Sbjct: 13  TISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFPVVLIFFATDI 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  IG ELA IF +FT+ VWN+   +YQ+    P +L EV+ + RL    K   L +PF
Sbjct: 73  GGS-IGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLGKLSKLYIPF 131

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P +  N++ S +   F++  SE+  VG+T   + GIGS IA           LYA L 
Sbjct: 132 SVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKYTEALYA-LA 190

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW--NF 305
           +LGV         R      + F ++R    Y  D+ V  +  +    R I YS+   N 
Sbjct: 191 VLGVFVALITFALREF----SSFAVQR----YGLDTEVSNMSVRRGRFR-IRYSAKISNA 241

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            +P++   K + R+  V      +   +  SN  +V   L +F         I    +S 
Sbjct: 242 VAPVTKLAKYVIRSKPVSLDEEEDEKRRSWSNVGKVIAALFLFGISYSIFTVIETIPKST 301

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS-IIWIPVGIWIGFRPHISSKIQPFAQ 423
              +   T  D LY+I    +T +  V LI I S +I I +G W+     I     P  Q
Sbjct: 302 WVSLVSSTPFD-LYLI----VTDYARVALISITSLVIAIFLGYWLSLHHRIDRVAIPVIQ 356

Query: 424 LLAAFPANVFFPLVVSCVS---YYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             AAFPA  +FPLV        Y  L P     ++ LL    T +Y+ ++   G    P+
Sbjct: 357 TFAAFPAPAYFPLVYGATYTMLYKILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPS 416

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           ++ EV ++ +++ W+  + ++ P  FPY +TG  +    AW    + E
Sbjct: 417 EYWEVMNNLNLSFWQKLKKVVFPSSFPYVITGLTSTVNSAWGGLAIGE 464



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPIT-LDVHSLPQYASRTT 69
            RR + N+  ++A + + GI   +   I+  T+P+   V +V  T  D++ +    +R  
Sbjct: 267 KRRSWSNVGKVIAALFLFGISYSIFTVIE--TIPKSTWVSLVSSTPFDLYLIVTDYARVA 324

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFTVVYFMNLY 127
           L  ++++VI++   +      +   R+  V +P++    + P   +  L +   Y M LY
Sbjct: 325 LISITSLVIAIFLGY----WLSLHHRIDRVAIPVIQTFAAFPAPAYFPLVYGATYTM-LY 379

Query: 128 PGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             K++G    E   +   F S  + + +S +  + N+P +  EV  +  LS WQK   + 
Sbjct: 380 --KILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEYWEVMNNLNLSFWQKLKKVV 437

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDL--- 238
            P S P ++  +  +++  W  +   E    I  G T+    G+   +ALA  + +L   
Sbjct: 438 FPSSFPYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVHEGLMKELALADSQGNLALI 497

Query: 239 --LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
             L+IL+A+     V+ +Y  L  R ++  S + +     GIY A
Sbjct: 498 GWLSILFAI-----VVVIYSILFTRKLLDLSRE-KYVAEEGIYAA 536


>gi|325519241|gb|EGC98695.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 95

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/95 (66%), Positives = 73/95 (76%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ILFNVIAGA ++PND+KE   +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIV
Sbjct: 1   ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           SE   WG   +   GLGAYIA+ T  G FP+++LG
Sbjct: 61  SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           F++     + P D +E +++FR+ GWQ +    +P   P  V   + +  G W   + SE
Sbjct: 3   FNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSE 62

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            +  GDT +   G+G+YIA      D   I+
Sbjct: 63  FVQWGDTKVVAHGLGAYIAQMTAAGDFPKII 93


>gi|325967864|ref|YP_004244056.1| binding-protein-dependent transporters inner membrane component
           [Vulcanisaeta moutnovskia 768-28]
 gi|323707067|gb|ADY00554.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta moutnovskia 768-28]
          Length = 557

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 247/538 (45%), Gaps = 30/538 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+   +++S++  + +   AAK+     + + I   ++++P++ F    +++F+    G 
Sbjct: 23  RVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVITFFPIVLIFFVKSI-GG 81

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG ELA  F +FT+ VWN+    Y+++   P+ LE+ +    L  W KF YL +P +MP
Sbjct: 82  YIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLGFWGKFRYLYIPVTMP 141

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +  N+++S +   F++V SE++ +G T   + GIG+ IA      +      A  T LG
Sbjct: 142 RVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSRSEWT----AAFTGLG 197

Query: 251 V-IFLYDQLLF---RPMIVWSNKF------RLERTTGIYP-ADSWVLYL-FRKTNFLRFI 298
           V + +   +LF   RP + W+ K+       + RT    P   S V  L  R   +LR +
Sbjct: 198 VLVVMVTSVLFGILRPFVDWAVKYSYDPFMEVTRTRVRRPIVTSRVRSLAARNMRYLRRV 257

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +  +   P+            ++    P N   +  ++R   +  + +   +   +I 
Sbjct: 258 -VAVEDAIMPIFVKASSYAVRHRLLSRPRPRNI--ITESERYIGIGIVIFVIGLITYSIY 314

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            +W++    + +  Y+  L  ++   +  FRV+++ + A +  IPV   +     + S +
Sbjct: 315 ESWKTTWVPIINNLYEYGLLYLYYLGLDWFRVILVTVAAILTAIPVNYLMVTHRRVESIL 374

Query: 419 QPFAQLLAAFPANVFFPLV-VSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVIAG 471
            P  + LA+ P + + PL+ +  ++Y       H++  + + ++    T WY+++N+  G
Sbjct: 375 LPVLEDLASIPVSAYLPLIAIPFITYLAVSLGSHISLEILVFVVAYLSTAWYVIYNMYVG 434

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW-- 529
               P    +VA +  ++ W+  R + +PG  P  +TG  +  G  W    V+E      
Sbjct: 435 MKTIPRSLWDVAENLRLSTWQKLRRLAIPGAMPATITGLASTAGSTWGGLEVAEYIQGLN 494

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G +++   G  A +   T  G+   +    LI+   V+ L+ FLW  L+       RL
Sbjct: 495 GQVYM-VHGYTALMDYYTAIGNIVGLEAMSLILGINVVLLSVFLWRKLFRLARERYRL 551



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 12/203 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPA 430
            ++ V +L  +  F  V L II SI+   +G + G+    +   +       Q L A P 
Sbjct: 8   SIVLVAFLATLATFGRVALTIILSIV---LGWFFGYAAAKNGLFERIFLSITQTLEAVPV 64

Query: 431 NVFFPLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             FFP+V    V  +  Y +   L +  L+     W I           P   ++ A   
Sbjct: 65  ITFFPIVLIFFVKSIGGY-IGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEML 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           ++  W  +RY+ +P   P      + +   A    +VSEV + G       G+GA IA  
Sbjct: 124 NLGFWGKFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASW 183

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           T +  +     G+ ++   V ++
Sbjct: 184 TSRSEWTAAFTGLGVLVVMVTSV 206


>gi|332797789|ref|YP_004459289.1| ABC-type anion transport system, duplicated permease component
           [Acidianus hospitalis W1]
 gi|332695524|gb|AEE94991.1| ABC-type anion transport system, duplicated permease component
           [Acidianus hospitalis W1]
          Length = 544

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 216/491 (43%), Gaps = 52/491 (10%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           ++ KS+    + + + +I +S+P++ F    +++F+    G  +G ELA +F +FT+ VW
Sbjct: 35  ISLKSKTFENIYISLSEIFESVPVISFFPVVLIFFV-FSIGGSLGIELAVLFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P ++EEV R++R     K   L +PFS+P +  N++ S +   F++ 
Sbjct: 94  NIWMGIYQAFKTVPSEMEEVIRNYRFGFVGKMLRLYIPFSIPRIAANLIPSFADALFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS- 267
            SE+  +G     +PGIG+ IA    E D    +YA++ +LG+      LL R    +S 
Sbjct: 154 VSEVFSIGTKCYEVPGIGTLIAQYTAEGDYTDAIYALI-VLGIFTTTITLLLREFAEYSV 212

Query: 268 NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN---VKKLCRTLGVIR 324
            K+ L+            L  F++  F   I YS     + LSN+     KL + L    
Sbjct: 213 KKYGLDTEAS--------LKSFKRGRFR--IRYS-----ARLSNSKGVFAKLGKYLTKPP 257

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVC-------------GVAIGIAWQSIGYIVNHF 371
           +   +N L     +     + I                     V I +   +  Y+++  
Sbjct: 258 YFTRQNRLMDEEEEAKKRKIPINMISAGIGILLLIIILYGAYSVIISVKPSTWSYLISTL 317

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             QD   +I LG     RV V+ +++ I  + VG +I    +    I P  Q  +AFPA 
Sbjct: 318 P-QD---LIDLGA-DYLRVAVISLMSFIFAVFVGYYIARHTNADRAIVPIIQTFSAFPAP 372

Query: 432 VFFPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            +FPL+      Y            ++ LL    T +Y+ ++   G    P+++ E+  +
Sbjct: 373 AYFPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYVFYSFWIGVKNLPSEYWELMDN 432

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-----TGLG 540
             +  W   R IILP  FPY + G  +    AW    + E   W  I+        TGL 
Sbjct: 433 LKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIGEY--WPDIYQSQTLEVRTGLM 490

Query: 541 AYIAESTEKGS 551
             +A +  +G+
Sbjct: 491 KALAVADNQGN 501



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 17/247 (6%)

Query: 48  IVDIVPITLD--VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLV 101
           I+ + P T    + +LPQ         L   VISL+ +F++A       A+       +V
Sbjct: 302 IISVKPSTWSYLISTLPQDLIDLGADYLRVAVISLM-SFIFAVFVGYYIARHTNADRAIV 360

Query: 102 PILDIMQSIPILGFLTFTVVY-FMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQS 157
           PI+    + P   +  F ++Y F   Y   + G    E   +   F S  + + +S +  
Sbjct: 361 PIIQTFSAFPAPAY--FPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYVFYSFWIG 418

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IV 214
           + N+P +  E+  + +L  W K   + +P + P ++  M  +++  W  +   E    I 
Sbjct: 419 VKNLPSEYWELMDNLKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIGEYWPDIY 478

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
              T+    G+   +A+A  + +L  + +  L    ++ +Y  L  R M+  + K +   
Sbjct: 479 QSQTLEVRTGLMKALAVADNQGNLALVGWLSLIFAIIVVIYSVLFTRKMMDLARK-KYVA 537

Query: 275 TTGIYPA 281
             GIY A
Sbjct: 538 EEGIYAA 544


>gi|146304142|ref|YP_001191458.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera sedula DSM 5348]
 gi|145702392|gb|ABP95534.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera sedula DSM 5348]
          Length = 538

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 224/474 (47%), Gaps = 37/474 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+   +++S++  ++   LA K+R    V + + ++++S+P++ F    +++F++  
Sbjct: 14  TVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFPVVLIFFVSDI 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G +LA IF +FT+ VWN+   +YQ+   +P +L EV+ + RL    K   L +PF
Sbjct: 74  -GGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLGKMSKLYIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA----LAIKEQDLLAILY 243
           S+P +  N++ S +   F++  SE+  VG++   + GIGS I+    L +  Q L A   
Sbjct: 133 SIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLYNQALYA--- 189

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
             L +L V+ ++     R    +S  ++ L+        +S    L R    +R+    S
Sbjct: 190 --LGILAVVVVFITFGLREFASFSVQRYGLD-------TESSNKALRRGRFRIRYSAKVS 240

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIG 358
            N  +P+S   + + R+   +     E   ++    ++  ++   +       V  V   
Sbjct: 241 -NAIAPVSKLARYVTRS-KTVPVDVDEEEEKVRQWGKIGIVIAALFLLGISYSVFTVIRS 298

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           ++ Q+  ++++   Y  VL       I   RV V+ +++ +I I VG W+         +
Sbjct: 299 VSPQTWSFLISSTPYDLVLI-----GIDYMRVGVISVVSLLIAIFVGYWLSVHERTERVV 353

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL-------WLSLLMIFGTQWYILFNVIAG 471
            P  Q +A+FPA  +FPL+    +Y  L P L       ++ LL    T +Y+ ++   G
Sbjct: 354 IPMIQTVASFPAPAYFPLLYGA-TYPILRPVLGGFTSEFYVLLLGFISTFYYVFYSYWMG 412

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               P ++ EV  + ++T W+  R +++P   PY V G  +    AW    + E
Sbjct: 413 IKNMPKEYWEVMDNLNLTFWQRLRRVVIPSAMPYIVAGLTSTVNSAWGGLAIGE 466



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--GKVIG- 133
           V+SLL         +   R   V++P++  + S P   +  F ++Y    YP    V+G 
Sbjct: 330 VVSLLIAIFVGYWLSVHERTERVVIPMIQTVASFPAPAY--FPLLYGAT-YPILRPVLGG 386

Query: 134 --AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             +E   +   F S  + + +S +  + N+P++  EV  +  L+ WQ+   + +P +MP 
Sbjct: 387 FTSEFYVLLLGFISTFYYVFYSYWMGIKNMPKEYWEVMDNLNLTFWQRLRRVVIPSAMPY 446

Query: 192 LVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDL-----LAILY 243
           +V  +  +++  W  +   E    I  G T+    G+   +ALA  +  L     L+IL+
Sbjct: 447 IVAGLTSTVNSAWGGLAIGEYWPDIYDGRTLEVHQGLMRELALADSQGKLALVGWLSILF 506

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           A++ ++  +F   +L    M +   K+  E   GIY A
Sbjct: 507 AIVVVIYSLFFTRKL----MDLARQKYVAEE--GIYAA 538


>gi|325519243|gb|EGC98696.1| sulfonate/nitrate/taurine transporter permease [Burkholderia sp.
           TJI49]
          Length = 92

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 76/92 (82%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+WIG RP ++ K+QP AQ LAAFPAN+ FP+ V  ++ +HLN ++WLS L++ GTQWY
Sbjct: 1   VGVWIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWY 60

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ILFNVIAGA+++PND++E A++F I GW+WWR
Sbjct: 61  ILFNVIAGATSYPNDYREAATNFRIRGWQWWR 92


>gi|284996663|ref|YP_003418430.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.D.8.5]
 gi|284444558|gb|ADB86060.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.D.8.5]
          Length = 535

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + +S+ H     W+      LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 TATISFIHSVFGSWIEEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NIPLAAWDSLIFGIVVMI 509



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 4/138 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +  L FT  + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIHS 380

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G  I  E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+ +P
Sbjct: 381 VFGSWI-EEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439

Query: 187 FSMPGLVWNMMMSMSGGW 204
            + P ++  +  +++  W
Sbjct: 440 STFPYIISGLSSTINSAW 457


>gi|227829305|ref|YP_002831084.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.S.2.15]
 gi|227455752|gb|ACP34439.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.S.2.15]
          Length = 535

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + +S+ H     W+      LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 AATISFIHSVFGSWIDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NIPLAAWDSLIFGIVVMI 509



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF---LTFTVVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +   L    + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFAATISFIHS 380

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G  I  E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+ +P
Sbjct: 381 VFGSWID-EFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439

Query: 187 FSMPGLVWNMMMSMSGGW 204
            + P ++  +  +++  W
Sbjct: 440 STFPYIISGLSSTINSAW 457


>gi|15899210|ref|NP_343815.1| ABC transporter, putative [Sulfolobus solfataricus P2]
 gi|227826664|ref|YP_002828443.1| binding-protein-dependent transporters inner membrane component
           [Sulfolobus islandicus M.14.25]
 gi|238618750|ref|YP_002913575.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.4]
 gi|13815769|gb|AAK42605.1| ABC transporter, putative [Sulfolobus solfataricus P2]
 gi|227458459|gb|ACP37145.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.14.25]
 gi|238379819|gb|ACR40907.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.4]
 gi|323476396|gb|ADX81634.1| ABC-type anion transport system, duplicated permease [Sulfolobus
           islandicus HVE10/4]
          Length = 535

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + +S+ H          ++ LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NIPLAAWDSLIFGIVVMI 509



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +  L FT  + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379

Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               V G+   E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+
Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436

Query: 184 GVPFSMPGLVWNMMMSMSGGW 204
            +P + P ++  +  +++  W
Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457


>gi|229583828|ref|YP_002842329.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.27]
 gi|228018877|gb|ACP54284.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.27]
          Length = 535

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 231/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L       +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGALSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + +S+ H          ++ LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NIPLAAWDSLIFGIVVMI 509



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +  L FT  + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379

Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               V G+   E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+
Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436

Query: 184 GVPFSMPGLVWNMMMSMSGGW 204
            +P + P ++  +  +++  W
Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457


>gi|229583288|ref|YP_002841687.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.N.15.51]
 gi|228014004|gb|ACP49765.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.N.15.51]
          Length = 535

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 230/497 (46%), Gaps = 44/497 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            SE+  +G +   + GIG+ I      Q+        L  LG++ +       P+I+++ 
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQEYT----LALDGLGILAI-------PIIIFTY 202

Query: 269 KFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR-------T 319
             R     T   Y  D+ +    R    +R+    S N  +P     K + R       +
Sbjct: 203 LLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSASS 261

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
               R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+ 
Sbjct: 262 EEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLFN 315

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV-V 438
           + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+  
Sbjct: 316 LLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFT 372

Query: 439 SCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           + +S+ H          ++ LL    T +Y+ ++   G    PN + E+  +++ + W  
Sbjct: 373 ATISFIHTVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNVPNQYWEIMKNYNFSFWHK 432

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKGS 551
            RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G+
Sbjct: 433 LRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANGN 492

Query: 552 FP-----EVVLGVLIMC 563
            P      ++ G+++M 
Sbjct: 493 IPLAAWDSLIFGIVVMI 509



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +  L FT  + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379

Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               V G+   E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+
Sbjct: 380 ---TVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNVPNQYWEIMKNYNFSFWHKLRYV 436

Query: 184 GVPFSMPGLVWNMMMSMSGGW 204
            +P + P ++  +  +++  W
Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457


>gi|323473746|gb|ADX84352.1| ABC-type anion transport system, duplicated permease component
           [Sulfolobus islandicus REY15A]
          Length = 535

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 233/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           ++ +S+ H          ++ LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 IATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   I+ +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSISVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NIPLAAWDSLIFGIVVMI 509



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +     +  ++ +  
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFIATIS-FIH 379

Query: 130 KVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            V G+   E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+ +P
Sbjct: 380 SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439

Query: 187 FSMPGLVWNMMMSMSGGW 204
            + P ++  +  +++  W
Sbjct: 440 STFPYIISGLSSTINSAW 457


>gi|229578075|ref|YP_002836473.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.G.57.14]
 gi|228008789|gb|ACP44551.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.G.57.14]
          Length = 535

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A KS+    + + +++I +S+P++ F    +++F+    G  IG ELA  F +FT+ VW
Sbjct: 35  IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +   F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267
            SE+  +G +   + GIG+ I      Q+     Y + L  LG++ +       P+I+++
Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201

Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318
              R     T   Y  D+ +    R    +R+    S N  +P     K + R       
Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +    R + P  +L +  +  +  +L    F  +  V   + W    Y+++  T  +VL+
Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437
            + +  I   RV+ + I++ +  I +G +I  R  +   + P  Q  A+FPA  +FPL+ 
Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371

Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + +S+ H          ++ LL    T +Y+ ++   G    PN + E+  +++ + W 
Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550
             RY+I+P  FPY ++G  +    AW    + E    S  +    + G+   IA +T  G
Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491

Query: 551 SFP-----EVVLGVLIMC 563
           + P      ++ G+++M 
Sbjct: 492 NVPLAAWDSLIFGIVVMI 509



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126
           +R+L   ++SL+F+       A   R+  VL+P +    S P   +  L FT  + F++ 
Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379

Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               V G+   E   I   F S  + + +S +  + N+P    E+ +++  S W K  Y+
Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436

Query: 184 GVPFSMPGLVWNMMMSMSGGW 204
            +P + P ++  +  +++  W
Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457


>gi|159041469|ref|YP_001540721.1| binding-protein-dependent transport systems inner membrane
           component [Caldivirga maquilingensis IC-167]
 gi|157920304|gb|ABW01731.1| binding-protein-dependent transport systems inner membrane
           component [Caldivirga maquilingensis IC-167]
          Length = 553

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 246/527 (46%), Gaps = 47/527 (8%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AAK+  +  V + +   ++++P++ F    +V+F++   G  +G ELA  F +FT+ VWN
Sbjct: 39  AAKNGLVERVFLSVTQTLEAVPVITFFPIVLVFFISSIRGY-LGVELAVDFLVFTAVVWN 97

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +    Y+S+  + + LE+V+  ++LS   KF  L +P ++P +  N+++S + G F++  
Sbjct: 98  IWVGEYESIKTVSQSLEDVANMYKLSFIAKFSKLYIPVTIPRVAGNVLVSFADGLFYITV 157

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           SE+I +G     + GIGS I   +        + A++ ++ ++ +    + RP + W+ K
Sbjct: 158 SEVIALGTKSYHVFGIGSLIFSWVNVGMWFNAIIALIVLVIMVTIVVFGVLRPFVNWAVK 217

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFP- 328
           +  +    +            +T   R    +     + L+ NV+ L R     R   P 
Sbjct: 218 YSYDPYAEV-----------MRTGVRR---QTPSRIRASLARNVRYLRRITAAERALIPA 263

Query: 329 -------ENFLQLCSNQRVSYMLDIFWFCVVCGV----------AIGIAWQS--IGYIVN 369
                    + +L    R   +L  F   V  G+          ++  +W +  +  ++N
Sbjct: 264 FVRATSYAVYHRLTVRPRPINVLTRFDKYVAAGIGSLLLALIAYSVYSSWSTTWLPIMIN 323

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +   +V Y+ +LG +   R++++ + A +I IP+   +  RP + + + P  + LA+ P
Sbjct: 324 IYDNWEV-YLYYLG-LDWLRILLVTVSAILIAIPINYLMVTRPKLEAVLLPILEDLASIP 381

Query: 430 ANVFFPLV-VSCVSYYHLNPNLWLSL-LMIF-----GTQWYILFNVIAGASAFPNDFKEV 482
            + + PLV +  V+Y  +   L +SL +++F      T WY+++N+  G    P    +V
Sbjct: 382 VSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTAWYVIYNMYVGMKTIPRSLWDV 441

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGLG 540
           A++ +++ W     + +PG  P  +TG  +  G  W    ++E      G +++   G  
Sbjct: 442 ANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGLEIAEYFQGINGKVYM-VHGYT 500

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           A +   T  G+   +    LI+   V+ L+ FLW  L+    +  R+
Sbjct: 501 ALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTMARQRYRM 547



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV---VYFMNL 126
           LR+L   V ++L       L     +L  VL+PIL+ + SIP+  +L       V ++ +
Sbjct: 340 LRILLVTVSAILIAIPINYLMVTRPKLEAVLLPILEDLASIPVSAYLPLVAIPFVTYLAI 399

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G  I  E+      F S  W + ++MY  +  IPR L +V+ +  LS W K   L +P
Sbjct: 400 RLGLRISLEILVFIVAFLSTAWYVIYNMYVGMKTIPRSLWDVANNLNLSSWYKLTKLAIP 459

Query: 187 FSMPGLVWNMMMSMSGGW 204
            +MP  +  +  ++   W
Sbjct: 460 GAMPATITGLASTVGSTW 477


>gi|284173141|ref|ZP_06387110.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus solfataricus 98/2]
 gi|261600964|gb|ACX90567.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus solfataricus 98/2]
          Length = 536

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 225/483 (46%), Gaps = 40/483 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A K++    + + +L++ +S+P++ F    +++F+    G  +G ELA  F +FT+ VW
Sbjct: 35  IAIKNKAFENIYISVLEVFESVPVISFFPVVLIFFV-YRIGGYLGIELAVDFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P DL EVS ++RL    K   L +P+S P +  N++ S +  +F++ 
Sbjct: 94  NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAFFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            SE+  +G +   + GIG+ IA     Q+    L  +  +  +I ++  LL R    ++N
Sbjct: 154 VSEVFSIGSSSYHVFGIGTIIAAFTASQEYNLALEGLGVLAILITIFTYLLRR----FAN 209

Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR-------TLG 321
                 T   Y  D+ +    R    +R+    S N  +P     K + R       +  
Sbjct: 210 -----YTVSKYGLDTEIKVAKRGRMRIRYTTRMS-NTIAPFVKLSKYVTRIGSRTTISEE 263

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R + P  +L +  +  +  +L    F  +  V   +    + Y++++    +VL+ + 
Sbjct: 264 ETRRNLPWRYLGIGISVFLLGLLVYGAFSTISSVPKSV----LLYLISN--TPNVLFNL- 316

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV-SC 440
              I   RV+ + I++ +  I +G +I     +   + P  Q  A+FPA  +FPL++ + 
Sbjct: 317 --LIDYVRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPIIQAYASFPAPAYFPLLLMAT 374

Query: 441 VSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +S+ H     W +     LL    T +Y+ ++   G    PN + E+  +++ + W+  R
Sbjct: 375 ISFIHSVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWQKLR 434

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASW-----GHIHLRTTGLGAYIAESTEKG 550
           Y+I+P  FPY + G  +    AW    + E   W     G+    + G+   IA +T  G
Sbjct: 435 YVIVPSTFPYIIAGLSSTINSAWGGLAIGEY--WTNIVNGYTLQVSHGIMKNIAVATANG 492

Query: 551 SFP 553
           + P
Sbjct: 493 NVP 495



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 16/222 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF---LTFTVVYFMNL 126
           +R+L   ++SL+F+       A   R+  +L+PI+    S P   +   L    + F++ 
Sbjct: 321 VRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPIIQAYASFPAPAYFPLLLMATISFIH- 379

Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               V G+   E   I   F S  + + +S +  + N+P    E+ +++  S WQK  Y+
Sbjct: 380 ---SVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWQKLRYV 436

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            VP + P ++  +  +++  W  +   E    IV G T+    GI   IA+A    ++  
Sbjct: 437 IVPSTFPYIIAGLSSTINSAWGGLAIGEYWTNIVNGYTLQVSHGIMKNIAVATANGNVPL 496

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMI-VWSNKFRLERTTGIYPA 281
             +  L    V+ +Y     R M+ +   K+  E   GIY A
Sbjct: 497 AAWDSLIFGIVVIIYSIFFTRKMMDLAREKYVAEE--GIYLA 536


>gi|302348739|ref|YP_003816377.1| ABC transporter, putative [Acidilobus saccharovorans 345-15]
 gi|302329151|gb|ADL19346.1| ABC transporter, putative [Acidilobus saccharovorans 345-15]
          Length = 542

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 221/473 (46%), Gaps = 34/473 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT R+   + +S++  ++   LA KSR    V V + ++++S+P++ F    +++F++  
Sbjct: 17  TTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVLIFFVDRI 76

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  IG ELA  F +FT+ VWN+   +YQ+   +P  + EV+ + R     K   L +PF
Sbjct: 77  -GGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMRRLYIPF 135

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           SMP +  N++ S +  +F++  SE+  +G T   + GIGS IA  + E  L  + Y++L 
Sbjct: 136 SMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYVYYSLLG 195

Query: 248 M----LGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           +     GVIF       R    W+  K+ L+      P  +      R  +  RF  Y++
Sbjct: 196 LAMLIAGVIF-----ALRNFANWAVAKYGLDTP----PRSAHPGVRTRWRSLSRF--YAA 244

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
                 ++    +  R + + R       +QL S +++ + L I    ++  +  G A  
Sbjct: 245 ARPLRVITTVTSRPVRAVPLRRVE----RIQL-SERQLDWALRIVGAVLLLLIIYGAAKA 299

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           ++   V   T+  +L   W   + +     RV V+ +I+  I + VG ++ F     +  
Sbjct: 300 ALS--VKPSTWNYLLSNTWPIIVGLAYDYARVAVITLISFAIAVFVGYYLAFHRRAEAVF 357

Query: 419 QPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            P  Q L+A PA  +FPL+    S      +      L++  L    T +YI +    G 
Sbjct: 358 IPLIQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELYVLFLGFVSTFYYIFYAYWMGI 417

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            A P++  E+  + ++  ++  R I++PG  PY VTG  +    AW   ++ E
Sbjct: 418 KAVPHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLTSTIDSAWGGLMIGE 470


>gi|15920813|ref|NP_376482.1| hypothetical protein ST0594 [Sulfolobus tokodaii str. 7]
 gi|15621597|dbj|BAB65591.1| 544aa long hypothetical protein [Sulfolobus tokodaii str. 7]
          Length = 544

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 200/454 (44%), Gaps = 34/454 (7%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A  + K++    + V ++++ +S+P+  F    +++F+    G  +G E A +F +FT+ 
Sbjct: 38  AYASIKNKIFENIYVSLIEVFESVPVFSFFPIVLIFFIYDIGGS-LGVEFAVLFLVFTAV 96

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
            WN+    YQ+   +P DL EVS ++RL  W     L +PFS+P +  N++ S +   F+
Sbjct: 97  TWNIWMGEYQAFKTVPEDLLEVSENYRLKFWGTMTKLYIPFSIPRIAANLIPSFADALFY 156

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +  SE+  VG     + GIG+ IA  + E +    LY  + +L +  +   LL R     
Sbjct: 157 ITVSEVFAVGTHTYQVFGIGTVIANLVSEGEYTDALYG-IAVLAIFTIAITLLLREF--- 212

Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK---------KLC 317
            +K+ +ER    Y  D+ +    RK   + F GYS+    S LS   K         +L 
Sbjct: 213 -SKYSVER----YGLDTEI--SIRKRGRIHF-GYST-RLVSALSYPAKLAKVFPTPIRLR 263

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             +          +    S      +L  F         I +   + GY+++     D++
Sbjct: 264 SNIKEEDEEKEHKYFWKISGIVAGVLLLAFILYGAISTIISVPLSTWGYLISTLP-SDLI 322

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL- 436
            +++       RV ++ +++ +  I VG ++         + P  Q  +A PA  ++PL 
Sbjct: 323 SILF----DYIRVGIIALLSFVFAIFVGYYLTTHEKTEKIVIPIIQAYSAIPAPAYYPLF 378

Query: 437 VVSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           ++  + + H          ++  L    T +Y+ ++   G    P  + E+  ++    W
Sbjct: 379 LLVTLPFIHSIFGPFTNEFYVLFLGFISTFYYVFYSFWIGVKNLPQQYWEIMKNYDFKFW 438

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           +  RY+I+PG FPY + G  +    AW    + E
Sbjct: 439 QKLRYVIIPGTFPYIIAGLSSTINSAWGGLAIGE 472


>gi|126459292|ref|YP_001055570.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum calidifontis JCM 11548]
 gi|126249013|gb|ABO08104.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum calidifontis JCM 11548]
          Length = 453

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 5/189 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  RM   +V+S+   +      AKSRR   VL+P LD+MQS+PILGF    +  F++ +
Sbjct: 14  TYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALFVFVSFF 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P   IGAELAA+F IFTS  WN+ F +YQ+L  +PR+  E++R + L+   +  ++ +PF
Sbjct: 74  PR--IGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHVVIPF 130

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAML 246
           ++  L +N  +S +  +FF+ ASE+I +G T I L GIGS +  A ++ DL  A +   +
Sbjct: 131 TLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYVGIAV 189

Query: 247 TMLGVIFLY 255
            +LG + LY
Sbjct: 190 ALLGNVALY 198



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 14/190 (7%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           +L   ++ RV+ +I+I++ + +     +  +P     + P   +L++ P    +PL+ + 
Sbjct: 263 YLSLFSLARVLAVILISAAVGLATTALVVEKPSREVAVFPAVAVLSSIPPVFLYPLLAAF 322

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +        + + +L++     Y + N +A     P D   +A ++ I+GW +  +I++P
Sbjct: 323 I-----KGEILVLVLLLPAAALYTVINTLAAWRDVPRD---LAKAYQISGWLYLWHILIP 374

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY  TG +T  GGAWN  +V+E  +        +GLG+Y+A +  +G    +   V 
Sbjct: 375 AALPYIATGLLTTWGGAWNGLVVAEPFA------DVSGLGSYMAHAAGRGDVNALFASVA 428

Query: 561 IMCCFVLALN 570
           +M   V+A N
Sbjct: 429 VMTAIVVATN 438



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++PRDL   ++++++SGW   W++ +P ++P +   ++ +  G W        +VV +  
Sbjct: 351 DVPRDL---AKAYQISGWLYLWHILIPAALPYIATGLLTTWGGAW------NGLVVAEPF 401

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             + G+GSY+A A    D+ A+  ++  M  ++
Sbjct: 402 ADVSGLGSYMAHAAGRGDVNALFASVAVMTAIV 434


>gi|325525220|gb|EGD03088.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 137

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/129 (48%), Positives = 93/129 (72%), Gaps = 4/129 (3%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           P   DL A ++V+G +  LL GI  ++   P  +     I+L   +LP Y  RT  RM +
Sbjct: 11  PGWRDLAAMLIVVGFL--LLAGISARQMGGPLAVAHPPAISLSPAALPGYTLRTVARMFA 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA
Sbjct: 69  ALLASIVFTFVYATTAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 128

Query: 135 ELAAIFAIF 143
           E AAIFAIF
Sbjct: 129 ECAAIFAIF 137


>gi|16082188|ref|NP_394633.1| hypothetical protein Ta1177 [Thermoplasma acidophilum DSM 1728]
 gi|10640488|emb|CAC12302.1| hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 541

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 229/477 (48%), Gaps = 40/477 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L  ++IS++  +  A  A K +    + + I+++ +S+P++ F    ++ F+   
Sbjct: 14  TAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFFPIVLIIFVTRI 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G E+AA F +FT+ VWN+    YQ+   +PR++ EV+ ++++S   K   + +PF
Sbjct: 74  GGP-LGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFLTKMRRIFIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDLLAILYAML 246
           S P +  N+  S+S G+F++  SE+  VG       GIG+ + +LA   Q  + ++Y  L
Sbjct: 133 SYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGTVLDSLAASGQ--IRLIYVAL 190

Query: 247 TMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
            +L  + +   +  R    ++ +K+ ++    I       +   ++T   R +   + N 
Sbjct: 191 GILAAVIIVIIIGLREFSRYAVSKYTVDTDAPIIRRGRLNV---KQTT--RLLSVVARNP 245

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQ-LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            S L+   +   RTL       PE F +     +++S  + +    ++ G+   I + ++
Sbjct: 246 LSRLAGYYR--SRTLS----RPPEVFEKHEKRKEKISRYISVAIGVIILGL---ILYSAV 296

Query: 365 GYIVN----------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
             IV+          + T + +LY+++       RV V++ I+ +I I +G ++      
Sbjct: 297 TLIVSVPHSEWGRLFNLTPKIMLYLLY----DYLRVGVILAISFVISIFLGYYLAMHSRA 352

Query: 415 SSKIQPFAQLLAAFPANVFFPLV-VSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNV 468
                P  Q L+A+P  ++FP +  +  ++ H         +++  L    T +YI ++ 
Sbjct: 353 EGIGVPIIQTLSAYPPPIYFPFIFAASFAFIHGVFGPFTDEVYVLSLGFVSTFYYIFYSF 412

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             G  A P ++ EV  + ++  +   R IILPG FPY ++G  +    AW   ++ E
Sbjct: 413 WMGVKALPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGISSTINSAWGGLMIGE 469


>gi|58040918|ref|YP_192882.1| transport protein [Gluconobacter oxydans 621H]
 gi|58003332|gb|AAW62226.1| Transport protein [Gluconobacter oxydans 621H]
          Length = 547

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/528 (22%), Positives = 226/528 (42%), Gaps = 52/528 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             A  T L ++ +++I +  + + +  A +  R    L+P L + +++P LG +      
Sbjct: 61  DMAGLTVLHVILSLLIVVAASLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAAL 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F            L  +    +S +W +  ++  +   +P  L+EV+   R++GWQ+FW 
Sbjct: 121 F---------PPTLTIMLVAASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWR 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P ++P   +  M +M   W  ++++E +++  +     G G+    A+ +   L I+
Sbjct: 172 LQMPVAVPLTTFRAMQTMPAFWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIV 231

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKTNFLRFIGY 300
                +L +I + DQ L RPM+ W+ ++R E        P  SW+L ++R+T  + +   
Sbjct: 232 EVSGIILLLILVIDQALMRPMVGWAQRYRPEGPFEERARP-QSWLLTIWRRTKLMLW--- 287

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                   LS  V      +G  R   P + L      R    L      VV    +  A
Sbjct: 288 --------LSGGVSDALVWIGNWRLGRPRSILP--ERHRTVRELPEALLPVVSLFLLVYA 337

Query: 361 WQSIGYI--VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
               G +  V     + VL        T+  V   +++  ++W+P+G+ I         +
Sbjct: 338 VYHAGLLGQVPADLAESVL--------TLSHVCGTLLLCVLVWVPLGLVISEHGSSLRNV 389

Query: 419 QPFAQLLAA-FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
              A +    FPA + +PL   C      +P     +L+  G  W +   V+  A A P+
Sbjct: 390 CRMAVMACGLFPAVLLYPL---CRELGLDSP----VILLFLGAHWLVGIVVLDAAKAIPS 442

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE--VASWGHIHLR 535
             ++VA+   + G   WR ++LP I P    G +TA    WNA +V+E  V S       
Sbjct: 443 GLRQVAAGLRLRGVLLWRRLLLPAIAPELCGGLLTAVVPVWNAVMVAEAFVPS------- 495

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            +GLGA +      G+    +L ++++    + L+R +  PL +   +
Sbjct: 496 DSGLGAALLSEALSGAVAAQILALMLLTLLSMLLDRLVLQPLAVNAAQ 543


>gi|27877096|dbj|BAC55866.1| hypothetical protein [Acidianus brierleyi]
          Length = 537

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 213/461 (46%), Gaps = 54/461 (11%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A K+R    + + I ++++S+P++ F    +++F+    G  +G ELA +F +FT+ VW
Sbjct: 35  IAIKNRIFENIYISISEVLESVPVITFFPVVLIFFV-FEIGGSLGVELAVLFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   +P +L EVS +++L    K   L +PFS+P +  N++ S +   F++ 
Sbjct: 94  NIWMGIYQAFKTVPENLLEVSENYKLGFLDKMIKLYIPFSIPRIAANLIPSFADALFYIS 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            SE+  VG     + GIG+ I+      +    LY +L +L +       L R       
Sbjct: 154 VSEVFSVGVHTYQVFGIGTLISEYTAMGEYTNALY-LLLVLAIFTTSITFLLREF----A 208

Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLR---FIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325
            F ++R    Y  D+ V    ++ N  R    +GYS+    S       KL + +   R 
Sbjct: 209 AFSVQR----YGLDTEV----KENNMRRGRFRVGYSAR--LSSAKGPFTKLAKYVTRPR- 257

Query: 326 HFPENFLQLCSNQRVS-------------YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
             P +  +  S +++              ++L    F VV  V+    W    Y+ +  T
Sbjct: 258 --PIDIDEEESKKKMPWGKIGAGIGFLFLFLLAYSAFIVVKNVSAS-TWY---YLFS--T 309

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ-PFAQLLAAFPAN 431
             D L  I +  I   RV ++ +I+ +I I  G ++  + H + +I  P  Q +AAFPA 
Sbjct: 310 VPDDLIQIGMDYI---RVAIIALISFVIAIFSGYFLA-KDHKAERIAIPIIQSIAAFPAP 365

Query: 432 VFFPLVVSCVSYYHLNP-------NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            +FPL+    +Y +L+          ++  L    T +YI ++   G    P+++ EV  
Sbjct: 366 AYFPLLFGA-TYPYLSKILGGYTDEFYVLFLGFISTFYYIFYSYWLGVKNMPSEYWEVMD 424

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           + ++  W+  R +++P  FPY + G  +    AW    + E
Sbjct: 425 NLNMGFWQRLRKVVIPSAFPYIIAGLSSTVNSAWGGLAIGE 465


>gi|167010889|ref|ZP_02275820.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. holarctica FSC200]
          Length = 132

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 72/120 (60%)

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           GT WY+LFNVI+G S  P +  E+  SFH+ G +WW    +P +FPY V G I+A GGAW
Sbjct: 3   GTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAW 62

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           N++I +E+  WG   ++  G+GA ++ +T      +  L V+ +C  V     F+W PLY
Sbjct: 63  NSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKPLY 122



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 61/120 (50%)

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T   W + F++     N+P ++ E+++SF L G + ++   +P   P +V  ++ +  G 
Sbjct: 2   TGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGA 61

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           W   +A+E+++ G   I + GIG+ ++       L     A++ +  ++ L    +++P+
Sbjct: 62  WNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKPL 121


>gi|145590546|ref|YP_001152548.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum arsenaticum DSM 13514]
 gi|145282314|gb|ABP49896.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum arsenaticum DSM 13514]
          Length = 468

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 105/168 (62%), Gaps = 4/168 (2%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM  A+++++   +       +SRR+   ++P+LD++QS+PILGF    + +F+ L P  
Sbjct: 27  RMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFPLALYFFIALLPAA 86

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             GAELAAIF IFTS  WN+ FS+YQS   +PR+L ++SR + L+      ++ +P ++ 
Sbjct: 87  --GAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLALAHVFIPAALR 143

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           G+ +N+ +S +  +FF+ ASE+I +G T I L GIGS +     E D+
Sbjct: 144 GVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDV 190



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 14/193 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RV+  + I++++ +     +   P + + +     L+++ PA   +PL+ + V    
Sbjct: 283 TLVRVLATLAISALVALLTLHAVVRAPRLEAGVLLGVLLISSVPAVFLYPLLGALVRGEA 342

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L      G   Y + N +A     P D  +   ++ I G  +   +++P   PY
Sbjct: 343 LSVTLLLP-----GAVVYTVLNAVAAWRDVPQDLVK---AYQIRGRLYLTQVLIPASMPY 394

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG +TA GGAWNASIV+E     ++H    GLG    ++ ++G    +V  V  M   
Sbjct: 395 LITGLLTAWGGAWNASIVAE--PLANVH----GLGGLTTQAADRGDISLLVATVATMTLI 448

Query: 566 VLALNRFLWHPLY 578
           V+A+NR +W  LY
Sbjct: 449 VVAVNRVVWRRLY 461


>gi|119872760|ref|YP_930767.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
 gi|119674168|gb|ABL88424.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
          Length = 459

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 8/187 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I + V +L     R  L +LS + I+  +   YA    KSRR+  VL+P+LD++QS+PIL
Sbjct: 4   IAIAVLALLATFGRMALALLSTVAIA--YALAYAMY--KSRRVEAVLLPLLDVLQSVPIL 59

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           GF    +  F+ + P   IGAELAA F IFTS  WN+ F +YQS   +PR+L E+S+ + 
Sbjct: 60  GFFPIALYVFVFIMPQ--IGAELAAQFLIFTSMAWNIIFGIYQSFKTLPRELIEMSQVY- 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+      ++ +P ++  + +N  +S S  +FF+ ASE+I +G T + L GIGS++  A 
Sbjct: 117 LTERLALAHVFLPVALRSVYYNAAVSWSNAFFFITASEVITLG-TEVKLFGIGSFVVDAF 175

Query: 234 KEQDLLA 240
           ++ D  A
Sbjct: 176 EKGDTTA 182



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 23/218 (10%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ + Y+VN     DVL        T+ RVV+ + I+++  +     +   P + + +  
Sbjct: 257 WELLSYLVNSLI--DVLP-------TLARVVMTLTISALAGLLSVALVVKNPQLETTVFI 307

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +L++ PA   +PL+ S V    L+  L L      G+  Y + N +A     P D  
Sbjct: 308 ALSILSSIPAVFLYPLIGSVVRGEALSVALLLP-----GSIVYTVLNAVAAWRDVPKDL- 361

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A ++ I G  ++ +I++P   PY +TG +TA GGAWNA+IV+E  S  +++    GLG
Sbjct: 362 --ARAYGIGGAVYFIHILIPATLPYLITGLLTAWGGAWNATIVAE--SLANVN----GLG 413

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           AY+A+  + G+ P +++ V++M   V+ +N+ +W  LY
Sbjct: 414 AYMAQVAQLGNIPALIISVIVMSGVVITVNKLVWKRLY 451



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++  + IS L   +   L  K+ +L   +   L I+ SIP            + LY
Sbjct: 273 TLARVVMTLTISALAGLLSVALVVKNPQLETTVFIALSILSSIPA-----------VFLY 321

Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           P  G V+  E  ++  +    +     +   +  ++P+DL   +R++ + G   F ++ +
Sbjct: 322 PLIGSVVRGEALSVALLLPGSIVYTVLNAVAAWRDVPKDL---ARAYGIGGAVYFIHILI 378

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P L+  ++ +  G W         +V +++  + G+G+Y+A   +  ++ A++ ++
Sbjct: 379 PATLPYLITGLLTAWGGAW------NATIVAESLANVNGLGAYMAQVAQLGNIPALIISV 432

Query: 246 LTMLGVIFLYDQLLFR 261
           + M GV+   ++L+++
Sbjct: 433 IVMSGVVITVNKLVWK 448



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 4/167 (2%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIA 470
            + + + P   +L + P   FFP+ +    +    +   L    L+     W I+F +  
Sbjct: 41  RVEAVLLPLLDVLQSVPILGFFPIALYVFVFIMPQIGAELAAQFLIFTSMAWNIIFGIYQ 100

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                P +  E+ S  ++T      ++ LP         A  +   A+     SEV + G
Sbjct: 101 SFKTLPRELIEM-SQVYLTERLALAHVFLPVALRSVYYNAAVSWSNAFFFITASEVITLG 159

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              ++  G+G+++ ++ EKG      +G+ I     +AL  FLW  L
Sbjct: 160 T-EVKLFGIGSFVVDAFEKGDTTAAYVGIAIGTAGNIALYLFLWRRL 205


>gi|305662628|ref|YP_003858916.1| binding-protein-dependent transport systems inner membrane
           component [Ignisphaera aggregans DSM 17230]
 gi|304377197|gb|ADM27036.1| binding-protein-dependent transport systems inner membrane
           component [Ignisphaera aggregans DSM 17230]
          Length = 224

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 113/189 (59%), Gaps = 2/189 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+ SA ++S+    V     A+S+ L ++L PI+D++QSIP+LGF    +++ +N++
Sbjct: 13  SLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAVLLFLVNIF 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P   IG E+A+I  IFT QVWN+   +Y ++ ++P D   +S  + L+   +   + +P 
Sbjct: 73  PPP-IGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASRILKIYIPA 131

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  +  N ++S +GG FF+ A E+I  G+T   L GIG+ I     + D + +  A++ 
Sbjct: 132 ALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDYIDMYIAIML 191

Query: 248 MLGV-IFLY 255
           +L + IFLY
Sbjct: 192 LLAISIFLY 200



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 9/189 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPANVFFPLVVSCVSYYHLNP--NL 450
           A I+ I V + IG     S  ++    P   +L + P   FFP V+  +      P    
Sbjct: 20  AYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAVLLFLVNIFPPPIGVE 79

Query: 451 WLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVT 508
             S+++IF G  W ++  V +   + P+DF  ++  + + T  R  +  I   +F     
Sbjct: 80  MASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASRILKIYIPAALFAIASN 139

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             ++  GG +  +   E+ S+G+   R  G+G  I E   KG + ++ + ++++    + 
Sbjct: 140 SVVSWAGGLFFLT-ACEIISFGNTEYRLRGIGTTIIELASKGDYIDMYIAIMLLLAISIF 198

Query: 569 LNRFLWHPL 577
           L  FLW+PL
Sbjct: 199 LYIFLWNPL 207


>gi|18312383|ref|NP_559050.1| sulfonate transport permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
 gi|18159835|gb|AAL63232.1| sulfonate transport permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
          Length = 453

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM  A++I++   +  A    KSRR+   ++P+LD++QS+PILGF    +  F+ L+P  
Sbjct: 12  RMAIALLITIAVAYAVAYAMHKSRRVESFVLPVLDVLQSVPILGFFPIALYVFIYLFP-- 69

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+GAELAAIF IFTS  WN+ FS+YQS   +P +  +++R + L+   +  ++ +P ++ 
Sbjct: 70  VVGAELAAIFLIFTSMAWNIIFSVYQSFKTMPSEYVDMARIY-LNERLELAHVYIPAALR 128

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           G+ +N+ +S +  +FF+ ASE+I +G T I L GIGS +  A    D
Sbjct: 129 GIYYNIPVSWANAFFFITASEVITLG-TEIRLFGIGSLVVEAFNAGD 174



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 14/193 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV ++ I+    +     +  +P   + I     LL++ PA   +PL+ + V    
Sbjct: 268 SLLRVVAVLAISGAAGLAALYSVVKKPGWETAILLGTSLLSSIPAVFLYPLLGAVV---- 323

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   LL++ G   Y + N IA     P D    A ++ I G  ++ +I++P   PY
Sbjct: 324 -KGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHILVPASLPY 379

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG +T  GGAWNA+IV+E  +  H      GLG Y+A++ + G  P ++  V+ M   
Sbjct: 380 LITGMLTTWGGAWNAAIVAEPLASVH------GLGRYMADAADAGDMPRLLASVITMTAL 433

Query: 566 VLALNRFLWHPLY 578
           V+A+N+F+W  LY
Sbjct: 434 VVAVNKFVWKRLY 446



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 126 LYP--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           LYP  G V+  EL AI  +    +     +   +  ++P+DL   +R++++ G   F ++
Sbjct: 315 LYPLLGAVVKGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHI 371

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP S+P L+  M+ +  G W         +V + +  + G+G Y+A A    D+  +L 
Sbjct: 372 LVPASLPYLITGMLTTWGGAW------NAAIVAEPLASVHGLGRYMADAADAGDMPRLLA 425

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +++TM  ++   ++ +++ +   + K+R
Sbjct: 426 SVITMTALVVAVNKFVWKRLYEEAAKWR 453


>gi|171184672|ref|YP_001793591.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus neutrophilus V24Sta]
 gi|170933884|gb|ACB39145.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus neutrophilus V24Sta]
          Length = 458

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 95/149 (63%), Gaps = 4/149 (2%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SRR+  V++P+LD+MQS+P+LGF    +  F+   P   IGAELAA F IFTS  WNM 
Sbjct: 39  RSRRVEAVMLPVLDVMQSVPVLGFFPIALYIFVYFVPW--IGAELAAQFLIFTSMAWNMI 96

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           F +YQ+   +PR+L ++SR + L+   +  ++ +P ++  + +N  +S +  +FF+ ASE
Sbjct: 97  FGIYQAFKTLPRELLDMSRVY-LNERLELAHVFLPAALRSVYYNAAVSWANAFFFITASE 155

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +I +G T + L GIGS++  A +  D  A
Sbjct: 156 VITLG-TEVKLFGIGSFVVDAFERGDTTA 183



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 14/193 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T  RV+  + I++ + I     +  +P   + I      L++ PA   +PL+ S      
Sbjct: 272 TSARVLAALGISAAVGIAAVALVVRKPEAETPILLALSALSSVPAVFLYPLIGSVARGEA 331

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   L L      G+  Y   N +A     P DF +   ++ + G  ++ +++LP   PY
Sbjct: 332 LAVALLLP-----GSIVYTALNAVAAWRDVPRDFVK---AYGVRGAVYYVHVLLPAALPY 383

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG +TA GGAWNA+IV+E  +         GLGAY+ ++ + G+ P +   V +M   
Sbjct: 384 LVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAAQAGNTPALAASVAVMSAV 437

Query: 566 VLALNRFLWHPLY 578
           V+ +N+ +W  LY
Sbjct: 438 VIVVNKLVWRRLY 450


>gi|325519230|gb|EGC98685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 79

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 52/78 (66%)

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           AITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP+++LG+ +M  FV   
Sbjct: 1   AITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLF 60

Query: 570 NRFLWHPLYLYGTRCLRL 587
           NR LW P+Y Y    LRL
Sbjct: 61  NRLLWRPMYAYAESRLRL 78



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           + +  G W   + SE +  G T I   G+G+YIA    + D   I+  +  M   + L++
Sbjct: 2   ITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLFN 61

Query: 257 QLLFRPMIVWS-NKFRLE 273
           +LL+RPM  ++ ++ RL+
Sbjct: 62  RLLWRPMYAYAESRLRLD 79


>gi|48478103|ref|YP_023809.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM
           9790]
 gi|48430751|gb|AAT43616.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM
           9790]
          Length = 537

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 94/160 (58%), Gaps = 1/160 (0%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R+L   ++S++  +  A  A KS+    + + ++++ +S+P++ F    +V F+   
Sbjct: 14  TTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPIVLVIFITRI 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G ELAA F +FT+ VWN+  + YQ+   +PR++EEV  +  L  + K   L +PF
Sbjct: 74  GGP-LGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGKLSKLYIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           S+P +  N+  S+S G+F++  SE+I VG       GIG+
Sbjct: 133 SIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGT 172



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 13/174 (7%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV----VSCVSYY 444
           RV  +++I+  I I +G ++       S   P  Q L+A+PA ++FP V    +  +S +
Sbjct: 323 RVATILLISLAIAIFLGYYLAVNKRAESVGIPIIQTLSAYPAPIYFPFVFIFTLPFISKF 382

Query: 445 H--LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                   ++  +    T +Y+ ++   G  A P+++ E+  + ++  ++  RYII+P  
Sbjct: 383 FGPYTDEFYVLAIGFISTFYYVFYSFWMGVKALPSEYWELMKNMNMGYFKKMRYIIIPAA 442

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-----TGLGAYIAESTEKGS 551
           FPY ++G  +    AW   ++ E   W +I+        TGL   I  +T  G+
Sbjct: 443 FPYLISGISSTINSAWGGLMIGEY--WPNIYGDKSLYVHTGLMKLIDVATANGN 494


>gi|307596035|ref|YP_003902352.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta distributa DSM 14429]
 gi|307551236|gb|ADN51301.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta distributa DSM 14429]
          Length = 554

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 17/189 (8%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AAKS     V + I   ++++P++ F    +V+F+    G  IG ELA  F +FT+ VWN
Sbjct: 39  AAKSGLFERVFLSITQTLEAVPVITFFPIVLVFFVKSI-GGYIGTELAVDFLVFTAVVWN 97

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +    Y+++   P+ LE+ +  F LS W +F YL +P +MP +  N+++S +   F++V 
Sbjct: 98  IWVGEYEAIKTAPQSLEDAAEMFNLSFWGRFRYLYIPVTMPRVAGNVLVSFADALFYIVV 157

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDL------LAILYAMLT--MLGVIFLYDQLLFR 261
           SE+I +G T   + GIG+ IA    + +       L IL  M+T  + GV+        R
Sbjct: 158 SEVITLGTTQYSVFGIGALIASWTSKGEWVPAFVGLGILVVMVTAVLFGVL--------R 209

Query: 262 PMIVWSNKF 270
           P + W+ K+
Sbjct: 210 PFVNWAVKY 218



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%)

Query: 391 VVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY----- 444
           + L+  ASII  IP+   +     + + + P  + LA+ P + + PL+    + Y     
Sbjct: 343 IALVTAASIITAIPINYLMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATTL 402

Query: 445 --HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             H++  L + L+    T WY+++N+  G    P    +VA +  +  W+  R + +PG 
Sbjct: 403 GLHVSLELLVFLVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGA 462

Query: 503 FPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            P  +TG  +  G  W    V+E      G +++   G  A +   T  G+   +    L
Sbjct: 463 MPATITGLASTIGSTWGGLEVAEYIQGLNGQVYM-VHGYTALMDYYTAVGNVVGLEAMSL 521

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           I+   V+ L+ FLW  L+       RL
Sbjct: 522 ILAINVILLSVFLWRRLFKLARERYRL 548



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 3/128 (2%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP---GKVIGAELAAIFAIFTS 145
           L    RR+  +L+PIL+ + SIP+  +L    + F        G  +  EL      + S
Sbjct: 360 LMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATTLGLHVSLELLVFLVAYLS 419

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             W + ++MY  +  IPR L +V+ + RL  WQK   L +P +MP  +  +  ++   W 
Sbjct: 420 TAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGAMPATITGLASTIGSTWG 479

Query: 206 FVVASEMI 213
            +  +E I
Sbjct: 480 GLEVAEYI 487



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPANVFF 434
           + +L  +  F  V L I+  I+   +G ++G+    S   +       Q L A P   FF
Sbjct: 9   IAFLATLATFGRVTLTIVLGIV---LGWFLGYAAAKSGLFERVFLSITQTLEAVPVITFF 65

Query: 435 PLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           P+V    V  +  Y +   L +  L+     W I           P   ++ A  F+++ 
Sbjct: 66  PIVLVFFVKSIGGY-IGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLSF 124

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +RY+ +P   P      + +   A    +VSEV + G       G+GA IA  T KG
Sbjct: 125 WGRFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSKG 184

Query: 551 SFPEVVLGVLIMCCFVLAL 569
            +    +G+ I+   V A+
Sbjct: 185 EWVPAFVGLGILVVMVTAV 203


>gi|255513790|gb|EET90055.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 528

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM +A+ IS++ +      AA+SR    V++PILDI Q++PIL F  F +   +   PG
Sbjct: 19  LRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFVIFVVVATLPG 78

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +IG   A IF I TS VWN+TF +Y+S+  +P++  EV+  +R+    +   + +P +M
Sbjct: 79  -MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDRLRRIFIPATM 137

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           P +V   ++S S G F++V SE+   G+
Sbjct: 138 PRVVEQSVLSWSIGLFYLVTSEIFSTGN 165



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 6/162 (3%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++A+ PA +  P++V  +  Y L+  L   ++      WY++F++IA          EV
Sbjct: 359 QVVASIPATILLPVLVVALEGYPLHSELVAIVVYFLSGIWYVIFSIIASTRTLSPSVLEV 418

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE------VASWGHIHLRT 536
              F I G   +R I L  + P  +TGA+T     WNASIV+E      + +   I    
Sbjct: 419 KKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGAVITAVH 478

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           TG+G  +  S   G+   +++ +L +   ++ +N+F+W   Y
Sbjct: 479 TGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWKRFY 520



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++ SIP    L   VV     YP   + +EL AI   F S +W + FS+  S   + 
Sbjct: 357 VFQVVASIPATILLPVLVVALEG-YP---LHSELVAIVVYFLSGIWYVIFSIIASTRTLS 412

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTV 219
             + EV + F + G   F  + +   +PG++   +  ++  W   + +E      +G+  
Sbjct: 413 PSVLEVKKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGA 472

Query: 220 IPLP---GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +      GIG  + +++   +L  +L A+L +  +I L ++ +++
Sbjct: 473 VITAVHTGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWK 517



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 77/203 (37%), Gaps = 4/203 (1%)

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP---ANVFFPLVVSCVSYY 444
            R+   + I+ I+ I VGIW          I P   +    P      F   VV      
Sbjct: 19  LRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFVIFVVVATLPG 78

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  N  +  L++    W I F V     A P +F EVAS + +      R I +P   P
Sbjct: 79  MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDRLRRIFIPATMP 138

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563
             V  ++ +        + SE+ S G+ +     G+G  I +    G+     L + +  
Sbjct: 139 RVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGNTEAYALALAVFI 198

Query: 564 CFVLALNRFLWHPLYLYGTRCLR 586
            FV+A     + PL    +R ++
Sbjct: 199 AFVIATRFLFFMPLERRYSRYMK 221


>gi|70606098|ref|YP_254968.1| ABC transporter [Sulfolobus acidocaldarius DSM 639]
 gi|68566746|gb|AAY79675.1| ABC transporter [Sulfolobus acidocaldarius DSM 639]
          Length = 543

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 84/141 (59%), Gaps = 1/141 (0%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LA KS  +  + V +++I +S+P+  FL   +++F+    G  +G +LA +F +FT+ VW
Sbjct: 35  LAIKSHVVENIYVSLIEIFESVPVFSFLPIVLIFFVFTIGGN-LGIQLAVLFLVFTAVVW 93

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +YQ+   IP+D+ EVS ++R S   KF  L +P+SMP +  N+  S     F++ 
Sbjct: 94  NIWMGIYQAYKTIPQDMLEVSENYRFSLMDKFSKLYIPYSMPRIASNLFPSFVNALFYIT 153

Query: 209 ASEMIVVGDTVIPLPGIGSYI 229
            SE+  +G++   + GIGS I
Sbjct: 154 VSEVFSIGNSQYQVFGIGSLI 174



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV----VS 439
            +   RV V+ +I+ +I I +G +I     I   I P  Q++AA PA V+FP +    +S
Sbjct: 324 AVDYIRVAVVTLISLLITIFLGYFIVVHKRIERVILPLIQIVAAIPAPVYFPFLYAFSIS 383

Query: 440 CVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
            +S+         ++ LL    T +Y  F+   G ++ P  F E+  ++ ++ W+  R I
Sbjct: 384 FISHLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGVTSMPVQFWEIMKNYELSFWQKLRQI 443

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSE----VASWGHIHLRTTGLGAYIAESTEKGS 551
           ILP   PY +TG  +     W    ++E    +    ++++R TGL   I   T +G 
Sbjct: 444 ILPSTMPYLITGITSTVNSTWGGLAIAEYWPNITQDHNLYVR-TGLMKDIVLFTNQGE 500



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R+    +ISLL T          +R+  V++P++ I+ +IP   +  F   + ++ +  
Sbjct: 328 IRVAVVTLISLLITIFLGYFIVVHKRIERVILPLIQIVAAIPAPVYFPFLYAFSIS-FIS 386

Query: 130 KVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            + GA   E   +   F S  +   FS Y  + ++P    E+ +++ LS WQK   + +P
Sbjct: 387 HLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGVTSMPVQFWEIMKNYELSFWQKLRQIILP 446

Query: 187 FSMPGLVWNMMMSMSGGW 204
            +MP L+  +  +++  W
Sbjct: 447 STMPYLITGITSTVNSTW 464


>gi|257075954|ref|ZP_05570315.1| sugar ABC transporter 1, permease protein [Ferroplasma acidarmanus
           fer1]
          Length = 540

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 1/181 (0%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++  +++S+L  +  A  + KS+    + + ++++ +SIP++ F    +V F+  +
Sbjct: 14  TAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFPVVLVIFIT-H 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G ELAA F +FT+ VWN+    YQ+   +PR++ EV  + R   + +  YL +PF
Sbjct: 73  VGGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFSRLRYLYIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P +  N+  S+S G+F++  SE+  VG       GIGS +   +    L  I  A+L 
Sbjct: 133 SVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQLFNIEMALLI 192

Query: 248 M 248
           +
Sbjct: 193 L 193



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN- 447
           RV  +++++ +I I +G ++           P  Q L+A+PA ++FP +      + L+ 
Sbjct: 326 RVGSILLVSMVIAIFLGYYLAVNKRAEKYWIPIIQSLSAYPAPIYFPFLFILTEPFMLSL 385

Query: 448 -----PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  L++  L    T +Y+ ++   G  A P+++ E+  +  +  ++  R +I+P  
Sbjct: 386 FGGFTNELYVLSLGFVSTFYYVFYSFWMGVKAMPSEYWEITKNLKLGYFKKMRKVIIPST 445

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLR-----TTGLGAYIAESTEKGSFPEVVL 557
           FPY ++G  +    AW   ++ E   W +I+        TGL   I  +T  G       
Sbjct: 446 FPYLISGISSTINSAWGGLMIGEY--WPNIYGTHSLSVHTGLMKTIDIATANGDLTLAAW 503

Query: 558 GVLIMCCFV 566
           G LI    V
Sbjct: 504 GSLIFGIIV 512


>gi|290559722|gb|EFD93047.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 379

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 12/266 (4%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM  A+ +S++         A+S+ L  + +P++D++Q++PIL F  F V  F+   PG 
Sbjct: 18  RMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFPFAVYLFVFDIPGS 77

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG   A IF I TS +WN+ F  YQ++  +P++  ++S+ + L+ +Q+   + +P ++P
Sbjct: 78  -IGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQRLKKIFIPAALP 136

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDLLAILYAMLTML 249
            +   M +S + G F++V SE+  VG     +  GIG     A    ++   +Y+++  +
Sbjct: 137 RISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGNVTLYIYSIVIFV 196

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR---KTNFLRFIGYSSWNFF 306
             +     L F      +N+F L+     Y        +F+     NF+   G      +
Sbjct: 197 LFVIATRLLFFENFEKMANRFYLKS----YKKRKLERVIFKSNLNKNFITLTGRIKNTLY 252

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFL 332
               N VKK  + +    F F   ++
Sbjct: 253 ---KNRVKKTIKHVSYAIFAFVSAYI 275


>gi|218884510|ref|YP_002428892.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
 gi|218766126|gb|ACL11525.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
          Length = 497

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 1/195 (0%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +A ++SLL         A++R +  VL+PILD++QSIPILGF    +  F+      
Sbjct: 15  RMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVVLSAFVYGLGPG 74

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +   EL+AI  I TS VWNM F +Y S+ ++    + ++  +R+    K   + VP S  
Sbjct: 75  LG-GELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLKLALVYVPASRT 133

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+ N ++S + GWFF+ ++E+I +G   + L G+GS+I  A    D  A    M  +  
Sbjct: 134 SLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQAFAAGMGVLFT 193

Query: 251 VIFLYDQLLFRPMIV 265
           VI     +L+ P +V
Sbjct: 194 VILATYIILWNPAVV 208



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 8/160 (5%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNV-IAGASAFPND 478
            +LL++ PA +++PL++      H  P  W  +  ++  G  WY+ FNV I G      D
Sbjct: 333 GELLSSIPAMIWWPLLLPVA---HAAP--WFVMFFVYLQGALWYVYFNVMIFGLQYVKRD 387

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+   + I G+ +++ + +P + P  +TG ++A GGAWNASI +E  ++G   +   G
Sbjct: 388 IIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWNASIAAEYIAFGDFEVDIGG 447

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +G+ I +   +G    V+   L M   ++ LN+ +W  L+
Sbjct: 448 VGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLIWGRLF 487



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A L+ + R +G+      +++ SIP        ++++  L P           F      
Sbjct: 316 AYLSHRRRAVGLAACTAGELLSSIP-------AMIWWPLLLPVAHAAPWFVMFFVYLQGA 368

Query: 147 VWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           +W + F+ M   L  + RD+ E++  +++ G+  F  + +P  +P ++  ++ +  G W 
Sbjct: 369 LWYVYFNVMIFGLQYVKRDIIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWN 428

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +A+E I  GD  + + G+GS I     + D L +L+  L M  VI L ++L+
Sbjct: 429 ASIAAEYIAFGDFEVDIGGVGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLI 482



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++R+    +++ +I +  GI +     + + + P   +L + P   FFP+V+S   Y 
Sbjct: 11  LSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVVLSAFVYG 70

Query: 445 HLNPNLWL-SLLMIFGTQ--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                    S +++  T   W ++F V A   +    F  +AS + I        + +P 
Sbjct: 71  LGPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLKLALVYVPA 130

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                ++ ++ +    W     +EV S G   L+  GLG++I +++ +G       G+ +
Sbjct: 131 SRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQAFAAGMGV 190

Query: 562 MCCFVLALNRFLWHP 576
           +   +LA    LW+P
Sbjct: 191 LFTVILATYIILWNP 205


>gi|325519245|gb|EGC98697.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 158

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
           +++L A+ + ++ M  VI  YDQLLFRP+I W++KFR+E T       SW+L L R+T  
Sbjct: 2   DKNLGAVGWVIVAMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRL 61

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +  +   +  FF+  +    +L  + G +RF  P+        ++ S  +DI W  +V  
Sbjct: 62  IHQLLVPAGWFFAKAARIPLRLPLS-GAMRFTLPK------VEKKASRTVDIVWATLVLI 114

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
               I W+   ++    T  +V +V+ LG IT+ RVVVLI IAS
Sbjct: 115 GTAYIVWRVFSFVSTGVTMAEVGHVLVLGLITLLRVVVLIAIAS 158


>gi|320101553|ref|YP_004177145.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
 gi|319753905|gb|ADV65663.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
          Length = 497

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY-FMNLYPG 129
           RM++A  +S L         A+ R +  VL+P+LDI+QSIP+LGF  F VV+  + + P 
Sbjct: 17  RMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGF--FPVVFTLLLMLPA 74

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           + +  E AA+F + T  +WNM F +Y ++ ++  D+  ++  + L  + +  Y+ VP + 
Sbjct: 75  RQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAFSRLAYIYVPSAR 134

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             L  N ++S +GGWFF+ + E+I  G     L G+GS I     E D      A+L + 
Sbjct: 135 AALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGDTWGFYTAILLLF 194

Query: 250 GVIFLYDQLLFRPMI 264
            +I     L+F P +
Sbjct: 195 LMIVSSYLLVFNPAV 209



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 8/160 (5%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVIA-GASAFPND 478
            ++L + PA +++PL+    S     P  WL  L++F  G+ WY  FN++  G      +
Sbjct: 332 GEVLGSIPAIIWWPLLSPLAS-----PLPWLVSLVVFLQGSFWYEFFNIMLFGVPEVREE 386

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+A  + + G+ ++RYI+LP + P   +GA++A GGAWN++IV+E  S G + +   G
Sbjct: 387 LMELARVYGVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILTVDLGG 446

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +G+ +A     G+     L +L+    ++ L++ LW  ++
Sbjct: 447 VGSTLARYVYSGNLEAASLTILLWAVMIVVLDKILWSRIF 486



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +  +L E++R + + G+  F Y+ +P  +P +    + +  G W   + +E    G   
Sbjct: 382 EVREELMELARVYGVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILT 441

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGI 278
           + L G+GS +A  +   +L A    +L    +I + D++L      WS  F+L E+T  +
Sbjct: 442 VDLGGVGSTLARYVYSGNLEAASLTILLWAVMIVVLDKIL------WSRIFKLVEKTHAV 495


>gi|13541218|ref|NP_110906.1| ABC-type nitrate transport permease [Thermoplasma volcanium GSS1]
 gi|14324606|dbj|BAB59533.1| ABC transport system ATP-binding protein PA [Thermoplasma volcanium
           GSS1]
          Length = 541

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 92/160 (57%), Gaps = 1/160 (0%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L  ++IS++  +  A LA K +    + + ++++ +S+P++ F    ++ F+   
Sbjct: 14  TAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFPIVLIIFVTRI 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G ELAA F +FT+ VWN+    YQ+   +P+++ EV+ ++R+S   +   + +PF
Sbjct: 74  GGP-LGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLSRMARIYIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           S P +  N+  S+S G+F++  SE+  VG       GIGS
Sbjct: 133 SYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGS 172



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 13/174 (7%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV-VSCVSYYH-- 445
           RV  +++++ II I +G  +           P  Q+L+A+P  ++FP V  +  ++ H  
Sbjct: 327 RVATILVVSFIISIFLGYSLAIHTRAEGIGVPLLQVLSAYPPPIYFPFVFAASYTWIHNL 386

Query: 446 ---LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +    ++  L    T +Y+ ++   G  A P+++ EV  + ++  ++  R IILPG 
Sbjct: 387 MGPVTNEFFVIGLGFISTFYYMFYSFWMGVKALPSEYFEVMKNLNLGFFKKMRMIILPGT 446

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-----GLGAYIAESTEKGS 551
           FPY ++G  +    AW   ++ E   W  I    T     G+  +I   TE G+
Sbjct: 447 FPYLISGISSTINSAWGGLMIGEY--WPDIVGDKTLQIHYGIMKFIDIQTEAGN 498


>gi|327311383|ref|YP_004338280.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus uzoniensis 768-20]
 gi|326947862|gb|AEA12968.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus uzoniensis 768-20]
          Length = 543

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 100/170 (58%), Gaps = 1/170 (0%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L+ +  S++  ++   +A KS+    V   ++ + +S+P+  F    +V+F++  
Sbjct: 14  STARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFSFFPVVLVFFVSGI 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +GAELAA F +FT+ VWN+   +YQ+   +PR++ EV+ + RL    +  +L +P+
Sbjct: 74  -GGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSRMRHLYIPY 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           SMP +  N+M S S G+F++  SE+  VG +   + GIGS IA    E +
Sbjct: 133 SMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGN 182



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 17/176 (9%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC-------- 440
           RV  + +++  + + +G ++     +   + P  Q+ AA+PA V+FPL+ +         
Sbjct: 329 RVFAITLLSMALAVTLGYYLATHHEVERVVVPAIQVFAAYPAPVYFPLIFAATYPVIYGV 388

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + YY     L+  LL    T +Y+ ++   G  A P++  E+  + +++ W   R I+LP
Sbjct: 389 LGYY--GNELYAILLGFISTFYYVFYSFWMGLKAMPHEIWELMDNLNLSYWGRLRLILLP 446

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASW-----GHIHLRTTGLGAYIAESTEKGS 551
              PY V G  +    AW    + E   W     GH      GL   I  ST +G+
Sbjct: 447 AAMPYLVAGISSTIDSAWGGLAIGEY--WPGIYDGHDLAVGNGLMKLIVISTAEGN 500


>gi|91205579|ref|YP_537934.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
 gi|91069123|gb|ABE04845.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
          Length = 144

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 71/110 (64%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+ E       +    I LD   L +Y  +TTLRM  A++ISL+   +Y T+AAK +   
Sbjct: 34  GLHEMDSSIGAIAKNEIYLDPIHLLKYTLQTTLRMFIAIIISLITAIIYGTIAAKYKTAE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            +L+PILDI QS+PILGFLTFTV +F++++P   +G E A IFA FT+QV
Sbjct: 94  NILIPILDIFQSVPILGFLTFTVTWFVSIFPNSSLGIECAVIFATFTNQV 143


>gi|220910273|ref|YP_002485584.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7425]
 gi|219866884|gb|ACL47223.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7425]
          Length = 280

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L  ++G+I+   P+    L +N+R    L ++ F    G  +G+ WQ++          
Sbjct: 44  QLLSSVGIIKLPGPD---ALITNERTRTYL-LYPFFNRGGTDVGLFWQAMA--------- 90

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++  I A+++ I VGI IG  P ++  + P  Q L   P   + 
Sbjct: 91  -----------SLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWV 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           PL  S  ++    P    +L +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 140 PL--SLAAFQQNQP---AALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKF 194

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I++P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     
Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249

Query: 554 EVVLGVLIMCCFVLALNR 571
           +++L ++ +    L L+R
Sbjct: 250 DIILALVYIGAIGLILDR 267



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L   L PI   ++++P L ++  ++  F    P        AA+F IF + +W +  +  
Sbjct: 119 LNKALDPIFQFLRTVPPLAWVPLSLAAFQQNQP--------AALFVIFITAIWPILINTA 170

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP+D   V +  +LS  + F+ + +P ++P +   + +++   W  ++A+E+++ 
Sbjct: 171 VGVKQIPQDYINVRQVLQLSNSKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 230

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G     + GIG +I  + +   +  I+ A++ +  +  + D+++
Sbjct: 231 G-----IVGIGFFIWDSYQNNYISDIILALVYIGAIGLILDRVV 269


>gi|218248270|ref|YP_002373641.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|33591065|gb|AAQ23047.1| CmpB [Cyanothece sp. PCC 8801]
 gi|218168748|gb|ACK67485.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
          Length = 280

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 35/260 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +LC  +G+I+   P +   L  N+R    L ++ F    G  +G+ WQSI          
Sbjct: 44  QLCSMIGLIKLPPPSD---LWFNERTRIYL-MYPFFNRGGTDVGLFWQSIA--------- 90

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++   +A+I+ I  GI++G     +  + P  Q L   P   + 
Sbjct: 91  -----------SLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWV 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           P+ ++      L  N   +L +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 140 PIALAA-----LQQNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKF 194

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I++P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     
Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +++L ++ +    L L+RF+
Sbjct: 250 DIILALVYIGAIGLMLDRFM 269



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 32/160 (20%), Positives = 78/160 (48%), Gaps = 13/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+   ++++P L ++   +       P        AA+F IF + VW +  +    + 
Sbjct: 123 LDPLFQFLRTVPPLAWVPIALAALQQNQP--------AALFVIFITAVWPILINTAVGVQ 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   V +  +LS  + F+ + +P ++P +   + +++   W  ++A+E+++ G   
Sbjct: 175 QIPQDYINVRKVLQLSQKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG--- 231

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             + GIG +I  + +   +  I+ A++ +  +  + D+ +
Sbjct: 232 --IVGIGFFIWDSYQNNYISDIILALVYIGAIGLMLDRFM 269


>gi|257060406|ref|YP_003138294.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|256590572|gb|ACV01459.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 280

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 35/260 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +LC  +G+I+   P +   L  N+R    L ++ F    G  +G+ WQS+          
Sbjct: 44  QLCSMIGLIKLPPPSD---LWFNERTRIYL-MYPFFNRGGTDVGLFWQSVA--------- 90

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++   +A+I+ I  GI++G     +  + P  Q L   P   + 
Sbjct: 91  -----------SLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWV 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           P+ ++      L  N   +L +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 140 PIALAA-----LQQNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKF 194

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I++P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     
Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +++L ++ +    L L+RF+
Sbjct: 250 DIILALVYIGAIGLMLDRFM 269



 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 32/160 (20%), Positives = 78/160 (48%), Gaps = 13/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+   ++++P L ++   +       P        AA+F IF + VW +  +    + 
Sbjct: 123 LDPLFQFLRTVPPLAWVPIALAALQQNQP--------AALFVIFITAVWPILINTAVGVQ 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   V +  +LS  + F+ + +P ++P +   + +++   W  ++A+E+++ G   
Sbjct: 175 QIPQDYINVRKVLQLSQKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG--- 231

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             + GIG +I  + +   +  I+ A++ +  +  + D+ +
Sbjct: 232 --IVGIGFFIWDSYQNNYISDIILALVYIGAIGLMLDRFM 269


>gi|166364741|ref|YP_001657014.1| bicarbonate transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166087114|dbj|BAG01822.1| bicarbonate transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 276

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVK-----KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           NF +F    S +   P+   +      +L   LG+I+   P +   L +N+R    L ++
Sbjct: 14  NFGKFWKKHSQDILPPIIGTLGFLIVWQLVSMLGLIKLPPPSD---LITNERTRTYL-MY 69

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
            F    G+  G+ WQ++                     ++ RV++    A+++ I VGI 
Sbjct: 70  PFFDRGGIDKGLFWQTLA--------------------SLQRVLIGYSFAAVVGIGVGIM 109

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466
           +G    ++  + P  Q L   P   + PL ++      L  N   +L +IF T  W IL 
Sbjct: 110 VGLNSFLNKALDPLFQFLRTVPPLAWVPLSLAA-----LQQNQPAALFVIFITAVWPILI 164

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G    P D+  V     ++  +++  I++P   PY  TG   A G AW A I +E+
Sbjct: 165 NTTVGVQQIPQDYINVKQVLQLSSKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G +     G+G +I ++ +     +++L +  +    L L+RF+
Sbjct: 225 VMSGIV-----GIGFFIWDAYQNNYISDIILALFYIGGVGLLLDRFM 266



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 117/260 (45%), Gaps = 28/260 (10%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVD--------IVPITLDVHSLPQ 63
           S+ I P I   L F++V  ++++L  G+ +   P D++         + P   D   + +
Sbjct: 23  SQDILPPIIGTLGFLIVWQLVSML--GLIKLPPPSDLITNERTRTYLMYPF-FDRGGIDK 79

Query: 64  YASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
                TL  L  ++I   F  V       +   +  L   L P+   ++++P L ++  +
Sbjct: 80  GLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLS 139

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +       P        AA+F IF + VW +  +    +  IP+D   V +  +LS  + 
Sbjct: 140 LAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKF 191

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A +   + 
Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYIS 246

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  + GV  L D+ +
Sbjct: 247 DIILALFYIGGVGLLLDRFM 266


>gi|282896008|ref|ZP_06304039.1| Nitrate transport permease [Raphidiopsis brookii D9]
 gi|281199118|gb|EFA73988.1| Nitrate transport permease [Raphidiopsis brookii D9]
          Length = 279

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ I +GI IG    +S  + P  QLL   P     PL    
Sbjct: 84  WQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVP-----PLAWVP 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           +S   L  N   +L +IF T  W IL N   G    P D+  VA    ++   ++  +++
Sbjct: 139 ISLAALRQNEPAALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLI 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   + G AW A I +E+   G +     G+G +I +S +     EV+L +
Sbjct: 199 PAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQANKVSEVILAL 253

Query: 560 LIMCCFVLALNRFL 573
           + +    L L++F+
Sbjct: 254 VYIGVVGLLLDKFM 267



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 81/164 (49%), Gaps = 13/164 (7%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L P+  +++++P L ++  ++       P        AA+F IF + +W +  +  
Sbjct: 117 MSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITSLWPILINTA 168

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP D   V++  +LS  + F+ + +P ++P +   + +S+   W  ++A+E+++ 
Sbjct: 169 VGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMS 228

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G     + GIG +I  + +   +  ++ A++ +  V  L D+ +
Sbjct: 229 G-----IVGIGFFIWDSYQANKVSEVILALVYIGVVGLLLDKFM 267


>gi|75907249|ref|YP_321545.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75700974|gb|ABA20650.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 279

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 11/194 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ + +G+ IG    +S  + P  QLL   P     PL    
Sbjct: 83  WQILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALDPIFQLLRTVP-----PLAWVP 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           +S   L  N   +L +IF T  W IL N   G +  P D+  VA    ++   ++  I++
Sbjct: 138 ISLAALRQNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILI 197

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +  +  EV+L +
Sbjct: 198 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILAL 252

Query: 560 LIMCCFVLALNRFL 573
           + +    L L++ +
Sbjct: 253 VYIGVVGLILDKLM 266



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 85/167 (50%), Gaps = 13/167 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           ++ +   L PI  +++++P L ++  ++       P        AA+F IF + +W +  
Sbjct: 113 NKTMSKALDPIFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP+D   V++  +LS  + F  + +P ++P +   + +++   W  ++A+E+
Sbjct: 165 NTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ G     + GIG +I  A +  ++  ++ A++ +  V  + D+L+
Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNNVSEVILALVYIGVVGLILDKLM 266


>gi|307151630|ref|YP_003887014.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306981858|gb|ADN13739.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 279

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 35/258 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +   T+G+I+   P +   L +++R   +L ++ F    G+  G+ WQ++          
Sbjct: 43  QFISTIGLIKLPPPSS---LWTDERTRILL-LYPFYDRGGLDKGLFWQTLA--------- 89

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV     +A+II I VGI +G +P I+  + P  Q L      +  
Sbjct: 90  -----------SLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFL-----RMVA 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           PL    ++   L  N   ++ +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 134 PLAWVPIALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKF 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    
Sbjct: 194 FFKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYIS 248

Query: 554 EVVLGVLIMCCFVLALNR 571
           E++L V+ +    L L+R
Sbjct: 249 EIILAVIYIGAVGLILDR 266



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ + +P ++P +   +
Sbjct: 151 AAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKILLPSALPYIFTGL 210

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A++ +  V  + D
Sbjct: 211 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVIYIGAVGLILD 265

Query: 257 Q 257
           +
Sbjct: 266 R 266


>gi|218441576|ref|YP_002379905.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218174304|gb|ACK73037.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 279

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L  ++G+I+   P +   L +++R   +L ++ F    G+  G+ WQ++          
Sbjct: 43  QLISSVGIIKLPPPSS---LWTDERTRILL-LYPFYDRGGLDKGLFWQTLA--------- 89

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV     +A+II I VGI +G +P I+  + P  Q L      +  
Sbjct: 90  -----------SLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFL-----RMVA 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           PL    ++   L  N   ++ +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 134 PLAWVPIALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKF 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    
Sbjct: 194 FFKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYIS 248

Query: 554 EVVLGVLIMCCFVLALNR 571
           E++L V+ +    L L+R
Sbjct: 249 EIILAVIYIGAVGLILDR 266



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ + +P ++P +   +
Sbjct: 151 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKILLPSALPYIFTGL 210

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A++ +  V  + D
Sbjct: 211 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVIYIGAVGLILD 265

Query: 257 Q 257
           +
Sbjct: 266 R 266


>gi|218249102|ref|YP_002374473.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|257062188|ref|YP_003140076.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|218169580|gb|ACK68317.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|256592354|gb|ACV03241.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 277

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ I +GI IG    I   + P  Q+L   P   + P  ++ 
Sbjct: 81  WQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLP--IAL 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             +   NP+   ++ +IF T  W I+ N   G    P D+K VA    ++G++++  I+ 
Sbjct: 139 AGFEEANPS---AIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFKYFWEIMF 195

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I +S      PE+++ +
Sbjct: 196 PAAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSQLPEIIVAL 249

Query: 560 LIMCCFVLALNRFL 573
           + +    L L+R +
Sbjct: 250 IYVGLVGLILDRLV 263



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  +++++P L +L   +  F    P        +AIF IF + +W +  +    +  I
Sbjct: 120 PIFQVLRTVPPLAWLPIALAGFEEANP--------SAIFVIFITAIWPIILNTTVGVQQI 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D + V++  RLSG++ FW +  P ++P +   + + +   W  +VA+EM+V G     
Sbjct: 172 PKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  +     L  I+ A++ +  V  + D+L+
Sbjct: 228 --GIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 263


>gi|186682670|ref|YP_001865866.1| nitrate ABC transporter inner membrane subunit [Nostoc punctiforme
           PCC 73102]
 gi|186465122|gb|ACC80923.1| nitrate ABC transporter, inner membrane subunit [Nostoc punctiforme
           PCC 73102]
          Length = 279

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ I +G+ IG    +S  + P  QLL   P     PL    
Sbjct: 83  WQILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVP-----PLAWVP 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           +S   L  N   +L +IF T  W IL N   G +  P D+  VA    ++   ++  I++
Sbjct: 138 ISLAALRQNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILI 197

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +  +  EV+L +
Sbjct: 198 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILAL 252

Query: 560 LIMCCFVLALNR 571
           + +    L L++
Sbjct: 253 VYIGVVGLLLDK 264



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 84/167 (50%), Gaps = 13/167 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           ++ +   L PI  +++++P L ++  ++       P        AA+F IF + +W +  
Sbjct: 113 NKTMSKALDPIFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP+D   V++  +LS  + F  + +P ++P +   + +++   W  ++A+E+
Sbjct: 165 NTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ G     + GIG +I  A +  ++  ++ A++ +  V  L D+ +
Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNNVSEVILALVYIGVVGLLLDKAM 266


>gi|56752484|ref|YP_173185.1| permease [Synechococcus elongatus PCC 6301]
 gi|81300298|ref|YP_400506.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|75504666|sp|Q55106|CMPB_SYNE7 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|81676789|sp|Q5MZ55|CMPB_SYNP6 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|1019379|dbj|BAA05387.1| CmpB [Synechococcus elongatus PCC 7942]
 gi|56687443|dbj|BAD80665.1| permease protein [Synechococcus elongatus PCC 6301]
 gi|81169179|gb|ABB57519.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
          Length = 278

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G  R   P   L L + +R   +L ++ F    G+  G+ WQ+I                
Sbjct: 48  GATRLPGP---LSLFTEERTRELL-LYPFLDRGGLDKGLFWQTIA--------------- 88

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV     IA+II I VGI +G    +++ + P  Q L       + P  ++ 
Sbjct: 89  -----SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVP--IAL 141

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           V++    P    ++ +IF T  W IL N   G    P D+  VA    ++  ++   ++L
Sbjct: 142 VAFQQNQPA---AIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVL 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G +W A I +E+   G +     G+G +I ++ ++    +++L V
Sbjct: 199 PAALPYIFTGLRIAIGLSWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIILAV 253

Query: 560 LIMCCFVLALNRFL 573
           + +    L L+RF+
Sbjct: 254 IYIGAVGLLLDRFV 267



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+     I+ +       L   +R+L  +L P+   ++ I  L ++   +V F    P  
Sbjct: 92  RVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALVAFQQNQP-- 149

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 AAIF IF + VW +  +  + +  IP+D   V+R  R+S  +    + +P ++P
Sbjct: 150 ------AAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAALP 203

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A++ +  
Sbjct: 204 YIFTGLRIAIGLSWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYVSDIILAVIYIGA 258

Query: 251 VIFLYDQ 257
           V  L D+
Sbjct: 259 VGLLLDR 265


>gi|282898853|ref|ZP_06306840.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281196380|gb|EFA71290.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 279

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ I +GI IG    +S  + P  QLL   P     PL    
Sbjct: 84  WQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVP-----PLAWVP 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           +S   L  N   +L +IF T  W IL N   G    P D+  VA    ++   ++  +++
Sbjct: 139 ISLAALRQNEPAALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLI 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   + G AW A I +E+   G +     G+G +I ++ +     EV+L +
Sbjct: 199 PAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQANKVSEVILAL 253

Query: 560 LIMCCFVLALNRFL 573
           + +    L L++F+
Sbjct: 254 VYIGVVGLLLDKFM 267



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 81/164 (49%), Gaps = 13/164 (7%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L P+  +++++P L ++  ++       P        AA+F IF + +W +  +  
Sbjct: 117 MSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITSLWPILINTA 168

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP D   V++  +LS  + F+ + +P ++P +   + +S+   W  ++A+E+++ 
Sbjct: 169 VGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMS 228

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G     + GIG +I  A +   +  ++ A++ +  V  L D+ +
Sbjct: 229 G-----IVGIGFFIWDAYQANKVSEVILALVYIGVVGLLLDKFM 267


>gi|159030590|emb|CAO88253.1| cmpB [Microcystis aeruginosa PCC 7806]
          Length = 276

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 35/260 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L   +G+I+   P +   + +N+R    L ++ F    G+  G+ WQ++          
Sbjct: 41  QLMSMVGLIKLPPPSD---IITNERTRTYL-MYPFFDRGGIDKGLFWQTLA--------- 87

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++    A+++ I VGI +G    ++  + P  Q L   P   + 
Sbjct: 88  -----------SLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWV 136

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           PL ++      L  N   +L +IF T  W IL N   G    P D+  V     ++  ++
Sbjct: 137 PLSLAA-----LQQNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSNQKF 191

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I++P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +     
Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYIS 246

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +++L +  +    L L+RF+
Sbjct: 247 DIILALFYIGGVGLLLDRFM 266



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 13/164 (7%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L   L P+   ++++P L ++  ++       P        AA+F IF + VW +  +  
Sbjct: 116 LNKALDPLFQFLRTVPPLAWVPLSLAALQQNQP--------AALFVIFITAVWPILINTT 167

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP+D   V +  +LS  + F+ + +P ++P +   + +++   W  ++A+E+++ 
Sbjct: 168 VGVQQIPQDYINVKQVLQLSNQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 227

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G     + GIG +I  A +   +  I+ A+  + GV  L D+ +
Sbjct: 228 G-----IVGIGFFIWDAYQNNYISDIILALFYIGGVGLLLDRFM 266


>gi|126660803|ref|ZP_01731898.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110]
 gi|126617900|gb|EAZ88674.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110]
          Length = 280

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+I+ I VGI +G +P I+  + P  Q L      +  PL    
Sbjct: 86  WQTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFL-----RMVAPLAWVP 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           ++   L  N   ++ +IF T  W IL N   G    P D+  V     ++  +++  I+L
Sbjct: 141 IALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKILL 200

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L V
Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 256 VYIGAVGLLLDR 267



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ + +P ++P +   +
Sbjct: 152 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKILLPSALPYIFTGL 211

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A++ +  V  L D
Sbjct: 212 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVVYIGAVGLLLD 266

Query: 257 Q 257
           +
Sbjct: 267 R 267


>gi|17230370|ref|NP_486918.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120]
 gi|17131972|dbj|BAB74577.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120]
          Length = 279

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 11/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +    A+++ I +GI IG    +S  + P  QLL   P     PL    +S   
Sbjct: 88  SLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVP-----PLAWVPISLAA 142

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L  N   +L +IF T  W IL N   G    P D+  VA    ++   ++  I++P   P
Sbjct: 143 LRQNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG   A G AW A I +E+   G +     G+G +I ++ +     E++L ++ +  
Sbjct: 203 YIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISEIILALVYIGA 257

Query: 565 FVLALNRFL 573
             L L++ +
Sbjct: 258 VGLLLDKLM 266



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 84/167 (50%), Gaps = 13/167 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           ++ +   L P+  +++++P L ++  ++       P        AA+F IF + +W +  
Sbjct: 113 NKTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP+D   V++  +LS  + F  + +P ++P +   + +++   W  ++A+E+
Sbjct: 165 NTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEI 224

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ G     + GIG +I  A +   +  I+ A++ +  V  L D+L+
Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNYISEIILALVYIGAVGLLLDKLM 266


>gi|300866703|ref|ZP_07111387.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506]
 gi|300335303|emb|CBN56547.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506]
          Length = 281

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 13/207 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +N  TY   L+  W    ++ RV     +A+++ I  G+ +G  P ++  + P  Q L  
Sbjct: 74  MNSKTYGVGLF--WQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFL-- 129

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSF 486
               +  PL    ++   L  N   +L +IF T  W IL N   G    P+D+  VA   
Sbjct: 130 ---RMVAPLAWVPIALAALQQNEPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVL 186

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++   ++  I+ P   PY  TG   A G AW A I +E+   G      TG+G +I  +
Sbjct: 187 QLSRKEYYLNILFPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----ITGIGFFIWNA 241

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++    E++L V+ +    L L+R +
Sbjct: 242 YQQNYISEILLAVVYIGAVGLILDRLM 268



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 70/127 (55%), Gaps = 9/127 (7%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGL 192
           E AA+F IF + VW +  +  + +  IP D   V++  +LS  +K +YL +  P ++P +
Sbjct: 149 EPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLS--RKEYYLNILFPSALPYI 206

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +++   W  ++A+E+++ G T     GIG +I  A ++  +  IL A++ +  V 
Sbjct: 207 FTGLRIAIGLAWLAIIAAEIVMSGIT-----GIGFFIWNAYQQNYISEILLAVVYIGAVG 261

Query: 253 FLYDQLL 259
            + D+L+
Sbjct: 262 LILDRLM 268


>gi|289549090|ref|YP_003474078.1| nitrate ABC transporter inner membrane protein [Thermocrinis albus
           DSM 14484]
 gi|289182707|gb|ADC89951.1| nitrate ABC transporter, inner membrane subunit [Thermocrinis albus
           DSM 14484]
          Length = 274

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 10/190 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +  +I S + +P+G+++G    + +   P  Q L       +FP+ ++ 
Sbjct: 83  WQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWFPIGLAI 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               H      +++  +    W  L N   GAS+ P D++ VA  F  + W + RY++LP
Sbjct: 143 FQASHQAAVFTIAITSL----WPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVVLP 198

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+ +TG   + G AW   + +E+ + G      TG+G YI +S       +V+  +L
Sbjct: 199 YTLPFILTGLKISMGIAWMVIVAAEMLAGG------TGIGFYIWDSWNALDLRKVISALL 252

Query: 561 IMCCFVLALN 570
           I+    L L+
Sbjct: 253 IIGIVGLVLD 262



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  AA+F I  + +W    +      ++P D   V++ F  S W    Y+ +P+++P ++
Sbjct: 146 SHQAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVVLPYTLPFIL 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +SM   W  +VA+EM+  G       GIG YI  +    DL  ++ A+L ++G++ 
Sbjct: 206 TGLKISMGIAWMVIVAAEMLAGGT------GIGFYIWDSWNALDLRKVISALL-IIGIVG 258

Query: 254 L 254
           L
Sbjct: 259 L 259


>gi|172035220|ref|YP_001801721.1| bicarbontate transport system permease [Cyanothece sp. ATCC 51142]
 gi|171696674|gb|ACB49655.1| bicarbontate transport system permease protein [Cyanothece sp. ATCC
           51142]
          Length = 280

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A++I I VGI +G +P I+  + P  Q L      +  PL    
Sbjct: 86  WQTLASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFL-----RMVAPLAWVP 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           ++   L  N   ++ +IF T  W IL N   G    P D+  V     ++  +++  I+L
Sbjct: 141 IALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILL 200

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L V
Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 256 VYIGAVGLLLDR 267



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ + +P ++P +   +
Sbjct: 152 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILLPSALPYIFTGL 211

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A++ +  V  L D
Sbjct: 212 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVVYIGAVGLLLD 266

Query: 257 Q 257
           +
Sbjct: 267 R 267


>gi|111074973|gb|ABH04834.1| ABC-type transporter permease component [Heliobacillus mobilis]
          Length = 248

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 12/177 (6%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +I+A +  IP+G+ +G++  +   ++P   LL   P  V+ P  ++ +  + L+     S
Sbjct: 65  LILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTFTLS-----S 119

Query: 454 LLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + +IF G  W +  N +AG  A      + A +  ++ W     ++LPG  P+ ++G   
Sbjct: 120 IFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPHILSGGSI 179

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   A+     +E+         T+GLG Y+   ++   +P VV G+L++   VL L
Sbjct: 180 SLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILVIGIVVLLL 230



 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 28/142 (19%), Positives = 65/142 (45%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + S ++++LL       L    RRL   + P+ +++  IP + ++ +T+           
Sbjct: 61  LTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTF----- 115

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L++IF IF    W +  +    +  + + L + +R+  +S W     + +P ++P 
Sbjct: 116 ---TLSSIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPH 172

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++    +S+   +  + A+EMI
Sbjct: 173 ILSGGSISLVLAFILLTAAEMI 194


>gi|75909859|ref|YP_324155.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75703584|gb|ABA23260.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 273

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 10/193 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           WL   ++ RVVV  ++A++I IP+G  I         I P  QLL       + PL  + 
Sbjct: 80  WLILASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAV 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L PN     ++     W I+ N   G    P D++ V+    ++    +  I+LP
Sbjct: 140 ----FLKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKILLP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+  TG   A G +W A + +E+       L   G+G +I ++    +  E++L ++
Sbjct: 196 ATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAIV 249

Query: 561 IMCCFVLALNRFL 573
            +    L L++ +
Sbjct: 250 YLGAVGLVLDKIM 262



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L      F+   P        +AIF I  + +W +  +    +  +
Sbjct: 119 PLIQLLRPVAPLAWLPLAQAVFLKPNP--------SAIFVICITAIWPIILNTALGVKLV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   VS+   LS  + F+ + +P ++P +   + +++   W  VVA+EM++  D    
Sbjct: 171 PKDYRNVSKLLGLSPLESFYKILLPATLPHIFTGLRIAIGLSWLAVVAAEMLLSDD---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  A    ++  ++ A++ +  V  + D+++
Sbjct: 227 --GIGFFIVDAYNNANIHEMILAIVYLGAVGLVLDKIM 262


>gi|86607538|ref|YP_476300.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556080|gb|ABD01037.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|158819610|gb|ABW80922.1| permease protein NrtB [uncultured bacterium]
          Length = 319

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ +  G+ IG    +   + P  Q+L   P   + P  +S  ++  
Sbjct: 130 SLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLP--ISLAAFRD 187

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP+   ++ +IF T  W IL N + G    P D++ VA    ++GW+++  I+ P   P
Sbjct: 188 ANPS---AIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L ++ +  
Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298

Query: 565 FVLALNR 571
             L L+R
Sbjct: 299 VGLLLDR 305



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+     ++ L   V   +   +R L   L PI  +++++P L +L  ++  F +  P  
Sbjct: 133 RVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFRDANP-- 190

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 +AIF IF + +W +  +    +  IP+D   V+R  R+SGW+ F+ +  P ++P
Sbjct: 191 ------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A++ +  
Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298

Query: 251 VIFLYDQL 258
           V  L D++
Sbjct: 299 VGLLLDRI 306


>gi|86605329|ref|YP_474092.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-3-3Ab]
 gi|86553871|gb|ABC98829.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-3-3Ab]
          Length = 319

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ +  G+ IG    +   + P  Q+L   P   + P  +S  ++  
Sbjct: 130 SLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLP--ISLAAFRD 187

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP+   ++ +IF T  W IL N + G    P D++ VA    ++GW+++  I+ P   P
Sbjct: 188 ANPS---AIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L ++ +  
Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298

Query: 565 FVLALNR 571
             L L+R
Sbjct: 299 VGLLLDR 305



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+     ++ L   V   +   +R L   L PI  +++++P L +L  ++  F +  P  
Sbjct: 133 RVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFRDANP-- 190

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 +AIF IF + +W +  +    +  IP+D   V+R  R+SGW+ F+ +  P ++P
Sbjct: 191 ------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A++ +  
Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298

Query: 251 VIFLYDQL 258
           V  L D++
Sbjct: 299 VGLLLDRI 306


>gi|37521137|ref|NP_924514.1| nitrate/nitrite transport system permease protein [Gloeobacter
           violaceus PCC 7421]
 gi|35212133|dbj|BAC89509.1| nitrate/nitrite transport system permease protein [Gloeobacter
           violaceus PCC 7421]
          Length = 281

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 12/203 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++ + + W    ++ RV +   +A+++ + VGI +G        + P  Q+L   P   +
Sbjct: 81  ENDVGIAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAW 140

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            P+ ++ +S    NP+   ++ +IF T  W I+ N   G  + P D++ VAS   ++   
Sbjct: 141 LPIALAALS--QANPS---AIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPT 195

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  I+LP    Y  TG   A G AW A + +E+ + G       G+G +I +S      
Sbjct: 196 YFFQILLPSAASYIFTGLRIAVGLAWLAIVAAEMLTGG------VGIGFFIWDSYNSSRM 249

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
            +++L VL +      L+R +++
Sbjct: 250 ADIILAVLCVGLVGFVLDRMIYY 272



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R   + L PI  ++++IP L +L   +       P        +AIF IF + VW +  +
Sbjct: 119 RSFQLALDPIFQVLRTIPPLAWLPIALAALSQANP--------SAIFVIFITAVWPIIIN 170

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               + + P+D   V+   +LS    F+ + +P +   +   + +++   W  +VA+EM+
Sbjct: 171 TAVGVRSTPQDYRNVASVLKLSKPTYFFQILLPSAASYIFTGLRIAVGLAWLAIVAAEML 230

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             G       GIG +I  +     +  I+ A+L +  V F+ D++++
Sbjct: 231 TGGV------GIGFFIWDSYNSSRMADIILAVLCVGLVGFVLDRMIY 271


>gi|87302043|ref|ZP_01084877.1| permease protein [Synechococcus sp. WH 5701]
 gi|87283611|gb|EAQ75566.1| permease protein [Synechococcus sp. WH 5701]
          Length = 265

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 35/258 (13%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L  +L + R   P   L L +++R   +L ++ F    G+  G+ WQ++          
Sbjct: 29  QLSASLNLTRLPGP---LSLWTDERTRELL-LYPFYDRGGLDKGLFWQTMA--------- 75

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV     +A+++ I  GI +G  P ++    P  Q L      +  
Sbjct: 76  -----------SLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFL-----RMVA 119

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           PL    ++      N   ++ +IF T  W IL N   G    P D++ VA    ++  R+
Sbjct: 120 PLAWVPIALVIFQKNQPAAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGRF 179

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  ++LP   PY  TG   + G AW A I +E+   G +     G+G +I ++ ++    
Sbjct: 180 FTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVS 234

Query: 554 EVVLGVLIMCCFVLALNR 571
           ++VL V+ +    L L+R
Sbjct: 235 DIVLAVIWIGAVGLLLDR 252



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 13/156 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   ++ +  L ++   +V F    P        AAIF IF + VW +  +  + +  I
Sbjct: 110 PLFQFLRMVAPLAWVPIALVIFQKNQP--------AAIFVIFITAVWPILINTAEGVRQI 161

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+   ++S  + F  + +P ++P +   + +S+   W  ++A+E+++ G     
Sbjct: 162 PQDYRNVALVLQMSKGRFFTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSG----- 216

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + GIG +I  A ++  +  I+ A++ +  V  L D+
Sbjct: 217 IVGIGFFIWDAYQQNYVSDIVLAVIWIGAVGLLLDR 252


>gi|16332005|ref|NP_442733.1| hypothetical protein slr0041 [Synechocystis sp. PCC 6803]
 gi|81672180|sp|Q55461|CMPB_SYNY3 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|1001317|dbj|BAA10804.1| unknown protein [Synechocystis sp. PCC 6803]
          Length = 280

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+I+ I  GI +G +P +   + P  Q L      +  PL    
Sbjct: 86  WQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFL-----RMVAPLAWVP 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           ++   L  N   ++ +IF T  W IL N   G    P D+  V     ++  +++  I++
Sbjct: 141 IALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKILI 200

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L V
Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255

Query: 560 LIMCCFVLALNR 571
             +    L L+R
Sbjct: 256 FYIGAVGLLLDR 267



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L   L PI   ++ +  L ++   +V      P        AAIF IF + VW +  +  
Sbjct: 119 LDKALDPIFQFLRMVAPLAWVPIALVALQQNQP--------AAIFVIFITSVWPILINTT 170

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V +  RLS  + F+ + +P ++P +   + +++   W  ++A+E+++ 
Sbjct: 171 EGVKQIPQDYINVRKVLRLSPQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 230

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           G     + GIG +I  A ++  +  I+ A+  +  V  L D+
Sbjct: 231 G-----IVGIGFFIWDAYQQNYISEIILAVFYIGAVGLLLDR 267


>gi|22299544|ref|NP_682791.1| bicarbonate transport system permease protein [Thermosynechococcus
           elongatus BP-1]
 gi|22295727|dbj|BAC09553.1| bicarbonate transport system permease protein [Thermosynechococcus
           elongatus BP-1]
          Length = 324

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV     +A+++ I +GI +G    ++  + P  Q L      +  PL    +S  
Sbjct: 133 ISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFL-----RMVAPLAWVPISLA 187

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L  N   ++ +IF T  W IL N   G    P D+K V+    ++   ++  I+LP   
Sbjct: 188 ALRQNEPAAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQTFFLKILLPSAL 247

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY  TG   A G AW A I +E+   G       G+G +I ++ ++    E+++ V+ + 
Sbjct: 248 PYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYVTEIIVAVVYIG 302

Query: 564 CFVLALNRFL 573
              L L+R +
Sbjct: 303 AIGLILDRLV 312



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 17/203 (8%)

Query: 61  LPQYASRTTL----RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           L Q  +R TL    R+     ++ +       L   S+ L   L PI   ++ +  L ++
Sbjct: 123 LDQGLARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWV 182

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             ++       P        AAIF IF + +W +  +    +  IP+D + VSR  RLS 
Sbjct: 183 PISLAALRQNEP--------AAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSK 234

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
              F  + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++ 
Sbjct: 235 QTFFLKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQN 289

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  I+ A++ +  +  + D+L+
Sbjct: 290 YVTEIIVAVVYIGAIGLILDRLV 312


>gi|170076486|ref|YP_001733125.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Synechococcus sp. PCC 7002]
 gi|169887348|gb|ACB01056.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Synechococcus sp. PCC 7002]
          Length = 279

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 8/124 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR   + + PI+ I++ +  L +L   +  F         GAE +AIF IF + +W+   
Sbjct: 113 SRNAWLAINPIIQILKPVSPLVWLPIALSIFN--------GAEPSAIFVIFITSLWSTII 164

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  + +  +PRD  EV+R   +  W++ W + +P S+P +   + +SM   W  +VA EM
Sbjct: 165 NTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIFTGLRISMGVAWLVIVAVEM 224

Query: 213 IVVG 216
           +  G
Sbjct: 225 LTGG 228



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++  I+ +++ IPVGIWIG   +    I P  Q+L      V+ P+ +S   +    P
Sbjct: 91  RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSI--FNGAEP 148

Query: 449 NLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           +   ++ +IF T  W  + N   G +  P D+ EVA    +  W+    +ILP   PY  
Sbjct: 149 S---AIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIF 205

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   +  E+ + G       G+G ++ +   + +   V L V ++    L
Sbjct: 206 TGLRISMGVAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVFVIGITGL 259

Query: 568 ALNRFL 573
            L+  L
Sbjct: 260 ILDSAL 265


>gi|192362345|ref|YP_001981051.1| nitrate ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190688510|gb|ACE86188.1| nitrate ABC transporter permease protein [Cellvibrio japonicus
           Ueda107]
          Length = 291

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F + +P        +AIF IF + +W +  +    + 
Sbjct: 132 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SAIFVIFITSIWPIIINTSVGVR 183

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP D   V+R  +L GWQ F+ + +P + P +   + + +   W  +VA+EM+V G   
Sbjct: 184 NIPMDYRNVARVIQLPGWQYFYKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLVGG--- 240

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F  D+L+
Sbjct: 241 ---VGIGFFIWDAWNSSRISDIILALIYVGLVGFALDRLV 277



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V   +A I  + +GI +G        + P  Q+L   P   + PL  S 
Sbjct: 95  WQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPL--SL 152

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             +   +P+   ++ +IF T  W I+ N   G    P D++ VA    + GW+++  I+L
Sbjct: 153 AGFQDSHPS---AIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQYFYKIML 209

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  +G     G +W A + +E+   G       G+G +I ++       +++L +
Sbjct: 210 PAAAPYIFSGLRIGVGLSWLAIVAAEMLVGG------VGIGFFIWDAWNSSRISDIILAL 263

Query: 560 LIMCCFVLALNRFL 573
           + +     AL+R +
Sbjct: 264 IYVGLVGFALDRLV 277


>gi|2501375|sp|Q51881|NRTB_PHOLA RecName: Full=Nitrate transport permease protein nrtB
 gi|887567|emb|CAA79657.1| hydrophobic protein [Geitlerinema sp. PCC 8501]
          Length = 279

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V  ++A+I  I +GI IG    +   + P  Q+L   P   + P  +S 
Sbjct: 84  WQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLP--ISL 141

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P    ++ +IF T  W I+ N   G    P D+  VA    ++   ++  ++L
Sbjct: 142 AAFRDSQPA---AIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVLL 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   A G +W A + +E+ + G       G+G +I ++   GS  EV+L +
Sbjct: 199 PATVPYIFTGLKIAIGLSWLAIVAAEMLTGG------VGIGFFIWDAYNSGSNSEVILAI 252

Query: 560 LIMCCFVLALN 570
           + +    L LN
Sbjct: 253 IYVGLVGLLLN 263



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        AAIF IF + +W +  +    + 
Sbjct: 121 LDPIFQVLRTVPPLAWLPISLAAFRDSQP--------AAIFVIFITAIWPIIINTAVGVQ 172

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           NIP+D   V+R  +LS    F  + +P ++P +   + +++   W  +VA+EM+  G
Sbjct: 173 NIPQDYNNVARVLKLSRLDYFLKVLLPATVPYIFTGLKIAIGLSWLAIVAAEMLTGG 229


>gi|227819750|ref|YP_002823721.1| Nitrate transport permease NrtB [Sinorhizobium fredii NGR234]
 gi|227338749|gb|ACP22968.1| Nitrate transport permease protein NrtB [Sinorhizobium fredii
           NGR234]
          Length = 297

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDGNP--------SAIFVIFITAIWPIIINTAVGIR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D + V+R  RL+G++ F  + +P + P +   + + +   W  +VA+EM++ G   
Sbjct: 190 NIPQDYQNVARVLRLNGFEYFAKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V FL D+L+
Sbjct: 248 ----GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLI 283



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+ + I +G+ +G        + P  Q+L   P   + PL  S  ++  
Sbjct: 106 SLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP+   ++ +IF T  W I+ N   G    P D++ VA    + G+ ++  I+LP   P
Sbjct: 164 GNPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFEYFAKIMLPAAAP 220

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG     G +W A + +E+
Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242


>gi|307309035|ref|ZP_07588715.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium
           meliloti BL225C]
 gi|306900508|gb|EFN31122.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium
           meliloti BL225C]
          Length = 297

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  +++++P L +L  ++  F +  P        +AIF IF + 
Sbjct: 125 GTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTP--------SAIFVIFITA 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D + V++  RL+G++ F  + +P + P +   + + +   W  
Sbjct: 177 IWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIMLPAAAPYIFTGLRIGIGLSWLA 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  V FL D+L+
Sbjct: 237 IVAAEMLIGGV------GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLM 283



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+ + + +G  +G        + P  Q+L   P   + PL  S  ++  
Sbjct: 106 SLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D++ VA    + G+ ++  I+LP   P
Sbjct: 164 GTPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIMLPAAAP 220

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG     G +W A + +E+
Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242


>gi|149377870|ref|ZP_01895600.1| putative nitrate transporter [Marinobacter algicola DG893]
 gi|149357872|gb|EDM46364.1| putative nitrate transporter [Marinobacter algicola DG893]
          Length = 331

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A+II +P+GI IG   H S+ I P  Q+        + PLV   VS  Y   +P    
Sbjct: 138 VLATIIAVPLGIIIGLNRHFSAAINPLIQIFKPVSPLAWLPLVTMVVSATYVSDDPMFEK 197

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L     +   + W  L N   G SA   D   V+    ++ W   R ++LP   P   
Sbjct: 198 SFLTSMITVTLCSLWPTLINTSVGVSAVNPDLLNVSKVLQLSFWTHVRKVVLPSSVPMIF 257

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      ++ GLG ++ +  + GS
Sbjct: 258 TGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGS 295


>gi|222082145|ref|YP_002541510.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
 gi|221726824|gb|ACM29913.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
          Length = 297

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 16/161 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  I++++P L +L  ++  F N  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQILRTVPPLAWLPLSLAAFQNSSP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+R  RL+  + F+ + VP + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVARVLRLNQIEFFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259
               GIG +I  A     L  I+ A LT +G+  F+ D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVA-LTYIGITGFILDKLV 283



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 13/187 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD+  + W   I++ RV     +A+I  + +G  IG        + P  Q+L   P   +
Sbjct: 95  QDI-GLAWRVLISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLDPIFQILRTVPPLAW 153

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            PL  S  ++ + +P+   ++ +IF T  W ++ N   G    P D++ VA    +    
Sbjct: 154 LPL--SLAAFQNSSPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVARVLRLNQIE 208

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  I++P   PY  TG     G +W A + +E+ + G       G+G +I ++      
Sbjct: 209 FFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 262

Query: 553 PEVVLGV 559
           P++++ +
Sbjct: 263 PDIIVAL 269


>gi|254503979|ref|ZP_05116130.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440050|gb|EEE46729.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 360

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 18/217 (8%)

Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           + H TY     Y+  +G  ++  V +  +IA+II +P+GI  G     +  I P  Q+  
Sbjct: 138 IKHRTYTGKPTYIDQIGT-SLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFK 196

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDF 479
                 + P+V   VS  + NP  WLS  ++         + W  L N   G ++   D 
Sbjct: 197 PVSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDL 256

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             V     +  W+    ++LP   P   TG   + G  W   I +E+ +      +  GL
Sbjct: 257 MNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 310

Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           G ++ +  + G   S  ++++ VL +      L+R +
Sbjct: 311 GKFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLM 347



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  V R  +L  W+    L +P S+P +   + +S+  GW  
Sbjct: 238 MWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +    Q L  I+ A+LT+  + F+ D+L+F
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLMF 348


>gi|188996007|ref|YP_001930258.1| nitrate ABC transporter, inner membrane subunit
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931074|gb|ACD65704.1| nitrate ABC transporter, inner membrane subunit
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 256

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 10/161 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  +I S+I IPVG  +G    +++      Q+L       +FP+ ++      
Sbjct: 70  SLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWFPIGLALFQNSE 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +++  I    W  L N   GAS  P DFK V+  F  +   ++RY+++P  F +
Sbjct: 130 KASIFTIAITSI----WPTLINTAYGASTIPQDFKNVSKVFGFSILNYFRYVVVPYTFSF 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG   + G AW   + SE+ + G      TG+G YI +S
Sbjct: 186 TLTGLKISIGIAWMVIVASEMLAGG------TGIGFYIWDS 220



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RL  +   ++ I++ +  L +    +  F N        +E A+IF I  + +W    + 
Sbjct: 97  RLNAMFNSLIQILRPVSPLAWFPIGLALFQN--------SEKASIFTIAITSIWPTLINT 148

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
                 IP+D + VS+ F  S    F Y+ VP++    +  + +S+   W  +VASEM+ 
Sbjct: 149 AYGASTIPQDFKNVSKVFGFSILNYFRYVVVPYTFSFTLTGLKISIGIAWMVIVASEMLA 208

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            G       GIG YI  +    +L  ++ A++ ++GVI
Sbjct: 209 GGT------GIGFYIWDSWNALNLRNVMSAII-LIGVI 239


>gi|218440457|ref|YP_002378786.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218173185|gb|ACK71918.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 280

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ I +G+ IG  P +   + P  Q+L   P   + P  +S 
Sbjct: 85  WQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLP--ISL 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   +P+   ++ +IF T  W I+ N   G    P D++ V+    ++   ++  I++
Sbjct: 143 AAFRQSDPS---AIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFNILI 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       +++L +
Sbjct: 200 PSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILAL 253

Query: 560 LIMCCFVLALNRFL 573
           + +    L L+R +
Sbjct: 254 IYVGVVGLLLDRLV 267



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L  ++  F    P        +AIF IF + +W +  +    + 
Sbjct: 122 LDPIFQVLRTIPPLAWLPISLAAFRQSDP--------SAIFVIFITAIWPIIINTTVGVQ 173

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   VSR  +LS  + F+ + +P ++P +   + + +   W  +VA+EM+V G   
Sbjct: 174 QIPQDYRNVSRVLQLSKVEYFFNILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV-- 231

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A++ +  V  L D+L+
Sbjct: 232 ----GIGFFIWDAYNSSRLGQIILALIYVGVVGLLLDRLV 267


>gi|307151074|ref|YP_003886458.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306981302|gb|ADN13183.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 279

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 14/228 (6%)

Query: 363 SIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           ++ YI N F  +    L + WL   ++ RV++  ++++++ IPVG  IG      S + P
Sbjct: 62  NLDYIFNPFYVRGPGNLGIGWLLIASLRRVLIGFVLSAMVAIPVGFLIGMSKPAMSALNP 121

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDF 479
             Q+        + P  +S   +   +P+   ++ +IF T  W  + N   G S+  +D+
Sbjct: 122 VIQIFKPVSPLAWLP--ISLAIFNQADPS---AIFVIFITSLWPTIINTALGVSSVNSDY 176

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +VA    +  WR    IILP   PY  TG   + G AW   +  E+ + G       G+
Sbjct: 177 LDVAKVLEMPRWRQIYKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGI 230

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G ++ +   + +   V L VL++    L L+  L     L   R  +L
Sbjct: 231 GFFVWDEWNRLNLNSVFLAVLVIGLTGLLLDYILGQIQVLVTHRKAKL 278



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   V+S +       L   S+     L P++ I + +  L +L  ++  F       
Sbjct: 90  RVLIGFVLSAMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWLPISLAIFNQ----- 144

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A+ +AIF IF + +W    +    + ++  D  +V++   +  W++ + + +P S+P
Sbjct: 145 ---ADPSAIFVIFITSLWPTIINTALGVSSVNSDYLDVAKVLEMPRWRQIYKIILPASLP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   + +S+   W  +VA EM+  G
Sbjct: 202 YIFTGLRISLGIAWLVIVAVEMLTGG 227


>gi|307153749|ref|YP_003889133.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306983977|gb|ADN15858.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 280

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ I VG+ IG  P +   + P  Q+L   P   + P  +S 
Sbjct: 85  WQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLP--ISL 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   +P+   ++ +IF T  W I+ N   G    P D++ V+    ++   ++  I++
Sbjct: 143 AAFRQSDPS---AIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFNILI 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       +++L +
Sbjct: 200 PSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILAL 253

Query: 560 LIMCCFVLALNRFL 573
           + +    L L+R +
Sbjct: 254 IYVGVVGLLLDRMV 267



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L  ++  F    P        +AIF IF + +W +  +    + 
Sbjct: 122 LDPIFQVLRTIPPLAWLPISLAAFRQSDP--------SAIFVIFITAIWPIIINTTVGVQ 173

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   VSR  +LS  + F+ + +P ++P +   + + +   W  +VA+EM+V G   
Sbjct: 174 QIPQDYRNVSRVLQLSKIEYFFNILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV-- 231

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A++ +  V  L D+++
Sbjct: 232 ----GIGFFIWDAYNSSRLGQIILALIYVGVVGLLLDRMV 267


>gi|254426861|ref|ZP_05040568.1| ABC transporter, permease protein [Alcanivorax sp. DG881]
 gi|196193030|gb|EDX87989.1| ABC transporter, permease protein [Alcanivorax sp. DG881]
          Length = 333

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++AS+I IP+GI+IG      + + P  QL        + PLV   VS  Y   +P +  
Sbjct: 135 LLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVSPLAWLPLVTMVVSAVYVTDDPLVAK 194

Query: 453 SLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L    T      W  L N   G ++   D   V+    +      R I+LP   P   
Sbjct: 195 SFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIVLPSALPMMF 254

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS     LG +++   V+
Sbjct: 255 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LGRIMVAVIVI 306

Query: 568 ALNRFLWHPLYLYGTRCL 585
            L  FL   L L   R L
Sbjct: 307 GLIGFLLDRLMLMLQRAL 324



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 12/144 (8%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L ++F +    +W    +    + ++ +DL  VS+  RL+       + +P ++P +   
Sbjct: 197 LTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIVLPSALPMMFTG 256

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVI 252
           + +S+   W  ++A+EM+         PG+G ++    +    Q L  I+ A++ +  + 
Sbjct: 257 LRLSLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLGRIMVAVIVIGLIG 310

Query: 253 FLYDQ--LLFRPMIVWSNKFRLER 274
           FL D+  L+ +  +VW +K  ++R
Sbjct: 311 FLLDRLMLMLQRALVW-DKSSVQR 333


>gi|290559723|gb|EFD93048.1| ABC-type anion transport system permease component [Candidatus
           Parvarchaeum acidophilus ARMAN-5]
          Length = 128

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++F ++A     P++  E+   FH+ G   W+ I L  I P  +TGA+T     WNASI+
Sbjct: 3   VIFAIVATTKYMPSNISEIKKIFHLKGITAWKKIYLKAIIPGVITGAVTGIAAEWNASII 62

Query: 524 SEVASWGHIHLRTT---GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +E  S G   + T+   G+G  +  + +  +   +V+ +  M   ++ +N F+W  LY
Sbjct: 63  AEYFSVGSGKVITSVNIGVGKALNLALKNNNLTLMVILLANMVLMIMLINYFIWRRLY 120


>gi|73661766|ref|YP_300547.1| nitrate/sulfonate/bicarbinate ABC transporter permease
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494281|dbj|BAE17602.1| putative ABC-type nitrate sulfonate taurine bicarbonate transport
           system permease component [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 253

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 12/190 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++FR +V  ++A +I +P+G  +G    +   I+P  QL+       + P VV      
Sbjct: 62  ISLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFGIG 121

Query: 445 HLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L      ++ +IF   ++ I+FN I G       + ++AS+ ++TGW+ ++ I+ PG F
Sbjct: 122 SLP-----AMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +   V+++L       L  +   L   + P+L +++ I  + +  F V++F    
Sbjct: 63  SLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFG--- 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG+ L A+  IF +  + + F+  + + +I     +++ +  L+GWQ +  +  P 
Sbjct: 120 ----IGS-LPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPG 174

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   ++  + M++   W F+V+ EMI
Sbjct: 175 AFKHIMGGIHMAVGTSWIFLVSGEMI 200


>gi|299133917|ref|ZP_07027111.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2]
 gi|298591753|gb|EFI51954.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2]
          Length = 299

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 140 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  ++A+EM++ G   
Sbjct: 192 NIPQDYRNVAAVVRLNPFEFFWKIMIPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV-- 249

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F+ D+++
Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALVYVGIVGFILDRMI 285



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I  I +G  +G        + P  Q+L   P   + PL  S 
Sbjct: 103 WHLSASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPL--SL 160

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +  + ++  I++
Sbjct: 161 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIMI 217

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A I +E+   G       G+G +I ++       E++L +
Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILAL 271

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 272 VYVGIVGFILDRMI 285


>gi|209546549|ref|YP_002278467.1| nitrate ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537793|gb|ACI57727.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 297

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F+ D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 32/234 (13%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           SY L  + F       IG+ W+ +       + Q VLY   L  +T   V++  II   +
Sbjct: 81  SYDLIAYPFFNNGSQDIGLGWRVL------VSLQRVLYGFGLAAVT--GVIIGAIIGQSV 132

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
           W   G+             P  Q+L   P   + PL  S  ++   NP+   ++ +IF T
Sbjct: 133 WAMRGL------------DPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFIT 175

Query: 461 Q-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W ++ N   G    P D++ VA    +  + ++  I+LP   PY  TG     G +W 
Sbjct: 176 SIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWL 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A + +E+ + G       G+G +I ++      P++++ +  +      L++ +
Sbjct: 236 AIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283


>gi|300866337|ref|ZP_07111039.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506]
 gi|300335664|emb|CBN56199.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506]
          Length = 290

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 9/163 (5%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQ 156
           L PI  ++++IP L +L  ++  F    P + +G   +E++A+F I  + +W +  +   
Sbjct: 121 LDPIFQVLRTIPPLAWLPISLGAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTV 180

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  IP+D   V+R  RL   + FW + +P ++P +   + + +   W  +VA+EM+V G
Sbjct: 181 GVQQIPQDYRNVARVLRLPRQKYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG 240

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  GIG +I  +     L  ++ A++ +  V  L D+L+
Sbjct: 241 V------GIGFFIWDSYNSSRLSHVILAVIYVGIVGLLLDRLV 277



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 17/202 (8%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ I +GI IG    +   + P  Q+L   P   + P  +S 
Sbjct: 84  WQLLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLP--ISL 141

Query: 441 VSYYHLNPNLWLSL---------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            ++   NP   + +         +++    W I+ N   G    P D++ VA    +   
Sbjct: 142 GAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQ 201

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +++  I+LP   PY  TG     G +W A + +E+   G       G+G +I +S     
Sbjct: 202 KYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSR 255

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+L V+ +    L L+R +
Sbjct: 256 LSHVILAVIYVGIVGLLLDRLV 277


>gi|166364220|ref|YP_001656493.1| nitrate/nitrite transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166086593|dbj|BAG01301.1| nitrate/nitrite transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 275

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+I+ I VGI IG    I   I P  Q+L   P   + P  +S  ++ +
Sbjct: 85  SLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLP--ISLAAFRN 142

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D+K V+    ++   ++  I+ P   P
Sbjct: 143 NEPS---AIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNILFPATVP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L ++ +  
Sbjct: 200 YVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILALIYVGI 253

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 254 VGFLLDRLM 262



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  I++++P L +L  ++  F N  P        +AIF IF + +W +  +    +  +
Sbjct: 119 PIFQILRTVPPLAWLPISLAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D + VSR  +LS  + F+ +  P ++P +   + + +   W  +VA+EM++ G     
Sbjct: 171 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  A     +  I+ A++ +  V FL D+L+
Sbjct: 227 --GIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 262


>gi|218672619|ref|ZP_03522288.1| nitrate ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 246

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 87  LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 138

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 139 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 195

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F+ D+L+
Sbjct: 196 ---VGIGFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 12/157 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476
           + P  Q+L   P   + PL  S  ++   NP+   ++ +IF T  W ++ N   G    P
Sbjct: 87  LDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIP 141

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++ VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G      
Sbjct: 142 QDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------ 195

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G +I ++       ++++ +  +      L++ +
Sbjct: 196 VGIGFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232


>gi|159898858|ref|YP_001545105.1| nitrate ABC transporter inner membrane subunit [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891897|gb|ABX04977.1| nitrate ABC transporter, inner membrane subunit [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 282

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G+ +G    +   + P  ++L       ++PL    ++  H  P   +   ++  
Sbjct: 104 IAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPL---GLAVLHNAPKA-VVFAIVIT 159

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + W  L N   G    P D K V+  F  + WR+   ++LP  FP  +TG   + G AW 
Sbjct: 160 SLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWM 219

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +  E+ + G      TGLG ++ +S    S   V+  +L++    LAL+R 
Sbjct: 220 VIVAGEMLAGG------TGLGFFVWDSWNALSLERVMSAILVIGITGLALDRL 266



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   I +        L   S  L  +L P+++I++ +  L +    +    N     
Sbjct: 93  RVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLHN----- 147

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A  A +FAI  + +W    +    + NIP DL+ VS+ FR S W+    + +P + P
Sbjct: 148 ---APKAVVFAIVITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFP 204

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG-----SYIALAIKEQDLLAILYAM 245
            ++  M +SM   W  +VA EM+  G       G+G     S+ AL++ E+ + AIL   
Sbjct: 205 AILTGMRLSMGIAWMVIVAGEMLAGGT------GLGFFVWDSWNALSL-ERVMSAILVIG 257

Query: 246 LTMLGVIFLYDQLLFRPMIVWSN 268
           +T L +  L+  L+ + M  W  
Sbjct: 258 ITGLALDRLFS-LIGQRMAAWQE 279


>gi|116254785|ref|YP_770621.1| putative nitrate transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259433|emb|CAK10571.1| putative nitrate transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 297

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F  D+L+
Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)

Query: 361 WQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           WQ     I Y   ++  QD+  + W   I++ RV+    +A++  + VG  IG       
Sbjct: 78  WQDSYDLIAYPFFNYGSQDI-GLGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMR 136

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475
            + P  Q+L   P   + PL  S  ++   NP+   ++ +IF T  W ++ N   G    
Sbjct: 137 GLDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNI 191

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D++ VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G     
Sbjct: 192 PQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 246

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I ++      P++++ +  +     AL++ +
Sbjct: 247 -VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283


>gi|241554242|ref|YP_002979455.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863548|gb|ACS61210.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 297

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F  D+L+
Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 13/211 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I Y   ++  QD+  + W   I++ RV+    +A++  + +G  IG        + P  Q
Sbjct: 85  IAYPFFNYGSQDI-GLGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQ 143

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEV 482
           +L   P   + PL  S  ++   NP+   ++ +IF T  W ++ N   G    P D++ V
Sbjct: 144 VLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNV 198

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+G +
Sbjct: 199 AEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFF 252

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I ++      P++++ +  +     AL++ +
Sbjct: 253 IWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283


>gi|16262759|ref|NP_435552.1| nitrate ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|14523389|gb|AAK64964.1| Nitrate transporter, permease [Sinorhizobium meliloti 1021]
          Length = 297

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  +++++P L +L  ++  F +  P        +AIF IF + 
Sbjct: 125 GTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTP--------SAIFVIFITA 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D + V++  RL+ ++ F  + +P + P +   + + +   W  
Sbjct: 177 IWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYIFTGLRIGIGLSWLA 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  V FL D+L+
Sbjct: 237 IVAAEMLIGGV------GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLI 283



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 6/142 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+ + + +G  +G        + P  Q+L   P   + PL  S  ++  
Sbjct: 106 SLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D++ VA    +  + ++  I+LP   P
Sbjct: 164 GTPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAP 220

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG     G +W A + +E+
Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242


>gi|22298894|ref|NP_682141.1| nitrate/nitrite transport system permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295075|dbj|BAC08903.1| nitrate/nitrite transport system permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 281

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 12/192 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A++I + +G+ IG    +   + P  Q+L   P   + P+ ++ 
Sbjct: 84  WQILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIALAA 143

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                L  N   ++ +IF T  W I+ N I G    P D+K VA    ++   ++  I++
Sbjct: 144 -----LRDNEPAAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNILV 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ V
Sbjct: 199 PATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIIVAV 252

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 253 IYVGIVGLVLDR 264



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   SR L   + PIL +++ +P L +L   +    +  P        AAIF IF + +W
Sbjct: 110 LIGSSRALYDAVDPILQVLRPVPPLAWLPIALAALRDNEP--------AAIFVIFITAIW 161

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    +  IP+D + V+R  RLS    F  + VP ++P +   + + +   W  +V
Sbjct: 162 PIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNILVPATVPYVFTGLRIGIGLSWLAIV 221

Query: 209 ASEMIVVG 216
           A+EM++ G
Sbjct: 222 AAEMLIGG 229


>gi|294339047|emb|CAZ87396.1| Glycine betaine transport system permease protein opuAB [Thiomonas
           sp. 3As]
          Length = 286

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 17/173 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +L+A V+ +L       L+AKSR L   L P+LDIMQ++P   +L   V++F + 
Sbjct: 98  KTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLRPVLDIMQTMPAFVYLVPAVIFFGLG 157

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L PG +       IFA+    +   T  + Q    +P +L E ++SF  + WQ    + +
Sbjct: 158 LVPGVIS----TTIFAL-PPLIRLTTLGIRQ----VPHELVEATQSFGATWWQLLTKVQI 208

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           P ++P ++  +  S+  G   VV S MI  G       G+G+ +   I + D+
Sbjct: 209 PSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GLGNVVLEGITQLDV 254


>gi|260892265|ref|YP_003238362.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
 gi|260864406|gb|ACX51512.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
          Length = 245

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 10/179 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R++  + +A+   +P+G+++G  P     + PF  L+   P  V  PL++      
Sbjct: 54  VSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVPLIMVVFGLG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L ++L++ F     IL  V  GA        +  +S  + G  ++R+++ P + P
Sbjct: 114 DAAKILLITLVLFF----QILLPVRDGARHLSPYLVDAVTSLGVRGLAFYRHVVFPAVLP 169

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
             +TG   A G A      +E  +         GLG Y+ ++  + ++P++  GVL M 
Sbjct: 170 EVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYAYPDLYAGVLAMS 222


>gi|282898754|ref|ZP_06306741.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281196281|gb|EFA71191.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 283

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 15/195 (7%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ + +GI IG    + + + P  Q+L   P   + P  +S 
Sbjct: 85  WQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLP--ISL 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   NP+   ++ +IF T  W IL N   G    P D+  VA    +   +++  I+ 
Sbjct: 143 AAFQQANPS---AIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIVF 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE---STEKGSFPEVV 556
           P   PY  TG     G +W A + +E+   G       G+G++I +   +T   +  E++
Sbjct: 200 PATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTDTNLSEII 253

Query: 557 LGVLIMCCFVLALNR 571
           + ++ +    L L+R
Sbjct: 254 IALIYVGIVGLMLDR 268



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 14/141 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   +R L   + PI  ++++IP L +L  ++  F    P        +AIF IF + +W
Sbjct: 111 LIGANRFLYNAVDPIFQVLRTIPPLAWLPISLAAFQQANP--------SAIFVIFITSIW 162

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    + NIP+D   V+R  RL   + F  +  P ++P +   + + +   W  +V
Sbjct: 163 PILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIVFPATVPYIFTGLRIGIGLSWLAIV 222

Query: 209 ASEMIVVGDTVIPLPGIGSYI 229
           A+EM+V G       GIGS+I
Sbjct: 223 AAEMLVGG------VGIGSFI 237


>gi|71282501|ref|YP_269991.1| putative nitrate ABC transporter permease [Colwellia
           psychrerythraea 34H]
 gi|71148241|gb|AAZ28714.1| putative nitrate ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 315

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443
           ++F V    ++A+II IP+GIW+G    ++S I P  Q+        + PLV   VS  Y
Sbjct: 108 SLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSALY 167

Query: 444 YHLNPNLWLSLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +P +  S L    T      W ++ N   G S+  +D   V+    +      + I+
Sbjct: 168 VSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKKIV 227

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +P   P   TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 228 IPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 274



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 12/175 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149
           ++RL   + PI+ I + +  L +L    +    LY      V  + L ++  +    +W 
Sbjct: 133 NKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSALYVSDDPMVSKSFLTSLITVSLCSLWP 192

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M  +    + +I  DL  VS+  RL        + +P S+P +   M +S    W  ++A
Sbjct: 193 MVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKKIVIPASIPMIFTGMRLSFGVAWMVLIA 252

Query: 210 SEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
           +EM+         PG+G ++         D LA + A + ++G I FL D+ +  
Sbjct: 253 AEMLAQN------PGLGKFVWDEFQNGSSDSLARIMAAVIVIGFIGFLLDRAMLE 301


>gi|86361183|ref|YP_473070.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86285285|gb|ABC94343.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 297

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+ ++ FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F  D+L+
Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 17/218 (7%)

Query: 361 WQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           WQ     I Y   ++  QD+  + W   +++ RV     +A++  + VG  IG       
Sbjct: 78  WQDSYDLIAYPFFNYGSQDI-GLGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMR 136

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475
            + P  Q+L   P   + PL  S  ++   NP+   ++ +IF T  W ++ N   G    
Sbjct: 137 GLDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNI 191

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D++ VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G     
Sbjct: 192 PQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 246

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I ++      P++++ +  +     AL++ +
Sbjct: 247 -VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283


>gi|317049860|ref|YP_004117508.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316951477|gb|ADU70952.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 277

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++V +  A++I IPVGI +G  P I   + P  +L    P   + PL+V       
Sbjct: 85  SLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIWFGIGE 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG           A +   T W+  R++ILPG  P 
Sbjct: 145 TS-KILLIYLAIFAP---VTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILPGALPE 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+L++   
Sbjct: 201 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGILVIALI 254

Query: 566 VLALN 570
             +L 
Sbjct: 255 AFSLE 259



 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   +  RML A+  + L           S  +  +L P++++ + +P L +L   V++
Sbjct: 80  QHLGASLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIW 139

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +T S    + N  +     +++   + WQ   +
Sbjct: 140 FG-------IG-ETSKILLIYLAIFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRW 191

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P ++P ++  + + +  GW  +VA+E+I  
Sbjct: 192 VILPGALPEILTGLRIGLGVGWSTLVAAELIAA 224


>gi|218437639|ref|YP_002375968.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218170367|gb|ACK69100.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 279

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 363 SIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           ++ YI+N F  +    L + WL   ++ RV++   +++++ IPVG  IG      S + P
Sbjct: 62  NLDYIINPFFVRGPGNLGIGWLLISSLRRVLIGFSLSALVAIPVGFLIGMSKPAMSALNP 121

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDF 479
             Q+L       + P  +S   +   +P+   ++ +IF T  W  + N   G ++  +D+
Sbjct: 122 VIQILKPVSPLAWLP--ISLAIFNQADPS---AIFVIFITSLWPTIINTALGVASVNSDY 176

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +VA    +  W+    IILP   PY  TG   + G AW   +  E+ + G       G+
Sbjct: 177 LDVAKVLEMPRWKQIFKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGI 230

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G +I +   + +   V L VL++    L L+
Sbjct: 231 GFFIWDEWNRLNLNSVFLAVLVIGLTGLLLD 261



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L    +S L       L   S+     L P++ I++ +  L +L  ++  F       
Sbjct: 90  RVLIGFSLSALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWLPISLAIFNQ----- 144

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A+ +AIF IF + +W    +    + ++  D  +V++   +  W++ + + +P S+P
Sbjct: 145 ---ADPSAIFVIFITSLWPTIINTALGVASVNSDYLDVAKVLEMPRWKQIFKIILPASLP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   + +S+   W  +VA EM+  G
Sbjct: 202 YIFTGLRISLGIAWLVIVAVEMLTGG 227


>gi|222106861|ref|YP_002547652.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4]
 gi|221738040|gb|ACM38936.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4]
          Length = 297

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  I++++P L +L  ++  F N  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQILRTVPPLAWLPLSLAAFQNSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP D   V+R  RL+  + F  + VP + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPDDYRNVARVLRLNPLEFFIRIMVPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259
               GIG +I  A     L  I+ A L  +GV  F+ D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLSDIIVA-LAYIGVTGFVLDKLV 283



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 6/147 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV +   +A+I+ + +G  +G        + P  Q+L   P   + PL  S  ++ 
Sbjct: 105 VSLERVAIGFGLAAIVGVFLGAVVGQSIWAMRGLDPIFQILRTVPPLAWLPL--SLAAFQ 162

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + NP+   ++ +IF T  W ++ N   G    P+D++ VA    +    ++  I++P   
Sbjct: 163 NSNPS---AIFVIFITSIWPVIINTAVGVRNIPDDYRNVARVLRLNPLEFFIRIMVPAAA 219

Query: 504 PYYVTGAITACGGAWNASIVSEVASWG 530
           PY  TG     G +W A + +E+ + G
Sbjct: 220 PYIFTGLRIGVGLSWLAIVAAEMLTGG 246


>gi|307944732|ref|ZP_07660070.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307771946|gb|EFO31169.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 360

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA+II +P+GI  G     +  I P  Q+        + P+V   VS  + NP  WLS 
Sbjct: 165 LIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATYANPYDWLSK 224

Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            ++         + W  L N   G ++   D   V     +  W+    ++LP   P   
Sbjct: 225 SLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S  ++++ VL +  
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGI 338

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 339 IGFMLDRLM 347



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  V R  +L  W+    L +P S+P +   + +S+  GW  
Sbjct: 238 MWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +    Q L  I+ A+LT+  + F+ D+L+F
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMF 348


>gi|159028058|emb|CAO88018.1| nrtB [Microcystis aeruginosa PCC 7806]
          Length = 277

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+I+ I  GI IG    I   I P  Q+L   P   + P  +S  ++ +
Sbjct: 87  SLQRVAVGFTLAAIVGIAAGILIGSSALIYDAIDPIFQILRTVPPLAWLP--ISLAAFRN 144

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D+K V+    ++   ++  I+ P   P
Sbjct: 145 NEPS---AIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNILFPATVP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L ++ +  
Sbjct: 202 YVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILALIYVGI 255

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 256 VGFLLDRLM 264



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  I++++P L +L  ++  F N  P        +AIF IF + +W +  +    +  +
Sbjct: 121 PIFQILRTVPPLAWLPISLAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQV 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D + VSR  +LS  + F+ +  P ++P +   + + +   W  +VA+EM++ G     
Sbjct: 173 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV---- 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  A     +  I+ A++ +  V FL D+L+
Sbjct: 229 --GIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 264


>gi|146284405|ref|YP_001174558.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572610|gb|ABP81716.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri
           A1501]
          Length = 263

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V  ++A +  + +G+ IG        + P  Q+L   P   + PL  S 
Sbjct: 67  WQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPL--SL 124

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             +   +P+   +L +IF T  W I+ N   G    P D++ VA    + G+ +++ I+L
Sbjct: 125 AGFQDSHPS---ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIML 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A I +E+   G       G+G +I ++       +++L +
Sbjct: 182 PAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNASRISDIILAL 235

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 236 VYIGVVGFVLDRLV 249



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F + +P        +A+F IF + +W +  +    + 
Sbjct: 104 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SALFVIFITAIWPIIINTAVGIR 155

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V++  +L+G++ F  + +P + P +   + + +   W  ++A+EM++ G   
Sbjct: 156 NIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG--- 212

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F+ D+L+
Sbjct: 213 ---VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 249


>gi|90577437|ref|ZP_01233248.1| putative nitrate transporter [Vibrio angustum S14]
 gi|90440523|gb|EAS65703.1| putative nitrate transporter [Vibrio angustum S14]
          Length = 324

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452
           I+AS+I IP+G+ +G    +     P  QLL       + PLV  V   SY   +P +  
Sbjct: 126 ILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAK 185

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L     +   + W  L N   G +    D   V+    ++ W+  R I+LP   P   
Sbjct: 186 SFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIF 245

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G AW   I +E+ +      +  GLG ++ +  + G   S   +++ V+++  
Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAASLSRIMVAVVMIGF 299

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 300 IGLMLDRLM 308



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149
           + +L M   PI+ +++ +  L +L    +     Y  K   V  + L ++  +    +W 
Sbjct: 142 NHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWP 201

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    + N+ +DL  VSR  RLS WQ    + +P ++P +   + +S+   W  ++A
Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261

Query: 210 SEMIVVGDTVIPLPGIGSYI 229
           +EM+         PG+G ++
Sbjct: 262 AEMLAQN------PGLGKFV 275


>gi|17228105|ref|NP_484653.1| nitrate transport permease protein [Nostoc sp. PCC 7120]
 gi|17129955|dbj|BAB72567.1| nitrate transport permease protein [Nostoc sp. PCC 7120]
          Length = 279

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  +++++P L +L  ++  F    P        +AIF IF + +W +  +    +  I
Sbjct: 121 PIFQVLRTVPPLAWLPISLAAFQQANP--------SAIFVIFITSIWPILLNTTVGVQQI 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V++  RL G + F+ +  P ++P +   + + +   W  +VA+EM+V G     
Sbjct: 173 PQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 228

Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIGS+I  A     E +L  I+ A++ +  V  L D+L+
Sbjct: 229 --GIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVI 469
            P + + + P  Q+L   P   + P  +S  ++   NP+   ++ +IF T  W IL N  
Sbjct: 112 NPLVYNAVDPIFQVLRTVPPLAWLP--ISLAAFQQANPS---AIFVIFITSIWPILLNTT 166

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P D+  VA    + G +++  I+ P   PY  TG     G +W A + +E+   
Sbjct: 167 VGVQQIPQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVG 226

Query: 530 GHIHLRTTGLGAYIAE---STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G       G+G++I +   +T + +  E++L ++ +    L L+R +
Sbjct: 227 G------VGIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267


>gi|329912974|ref|ZP_08275856.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327545472|gb|EGF30676.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 64

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           ++E  +WG   L   GLG+YI + T+ G F  + LG+ +MC FV+ LNRF W  LY
Sbjct: 1   MAEYVTWGKTTLIADGLGSYIKQMTDAGDFHRIALGIGVMCVFVMLLNRFFWRKLY 56


>gi|190895012|ref|YP_001985305.1| nitrate ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700673|gb|ACE94755.1| nitrate ABC transporter, permease protein [Rhizobium etli CIAT 652]
 gi|327194336|gb|EGE61196.1| nitrate ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 297

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+  + FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F  D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 13/205 (6%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++  QD+  + W   +++ RV     +A++  + VG  IG        + P  Q+L   P
Sbjct: 91  NYGSQDI-GLGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLDPIFQVLRTVP 149

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488
              + PL  S  ++   NP+   ++ +IF T  W ++ N   G    P D++ VA    +
Sbjct: 150 PLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRL 204

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
               ++  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++  
Sbjct: 205 NQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWN 258

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
               P++++ +  +     AL++ +
Sbjct: 259 SSRLPDIIVALAYIGIVGFALDKLV 283


>gi|75910738|ref|YP_325034.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75704463|gb|ABA24139.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 279

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  +++++P L +L  ++  F    P        +AIF IF + +W +  +    +  I
Sbjct: 121 PIFQVLRTVPPLAWLPISLAAFQQANP--------SAIFVIFITSIWPILINTTVGVQQI 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V++  RL G + F+ +  P ++P +   + + +   W  +VA+EM+V G     
Sbjct: 173 PQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 228

Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIGS+I  A     E +L  I+ A++ +  V  L D+L+
Sbjct: 229 --GIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVI 469
            P + + + P  Q+L   P   + P  +S  ++   NP+   ++ +IF T  W IL N  
Sbjct: 112 NPLVYNAVDPIFQVLRTVPPLAWLP--ISLAAFQQANPS---AIFVIFITSIWPILINTT 166

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P D+  VA    + G +++  I+ P   PY  TG     G +W A + +E+   
Sbjct: 167 VGVQQIPQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVG 226

Query: 530 GHIHLRTTGLGAYIAE---STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G       G+G++I +   +T + +  E++L ++ +    L L+R +
Sbjct: 227 G------VGIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267


>gi|37521656|ref|NP_925033.1| bicarbonate transport system permease protein [Gloeobacter
           violaceus PCC 7421]
 gi|35212654|dbj|BAC90028.1| cmpB [Gloeobacter violaceus PCC 7421]
          Length = 278

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+ + I VGI IG    I S + P  Q+L   P   + P  +S 
Sbjct: 84  WQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLP--ISL 141

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +     P    ++ +IF T  W I+ N   G    P D+  VA    ++  +++  ++L
Sbjct: 142 AAIQQSEPA---AIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVLL 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+VL +
Sbjct: 199 PAALPYIFTGLKIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSAKVSEIVLAL 252

Query: 560 LIMCCFVLALNRFL 573
           + +    L L++ +
Sbjct: 253 VYVGLVGLLLDKLV 266



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  ++++IP L +L  ++             +E AAIF IF + +W +  +    + 
Sbjct: 121 LDPLFQVLRTIPPLAWLPISLAAIQQ--------SEPAAIFVIFITAIWPIIINTAVGVQ 172

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   V+R  +LS  + F+ + +P ++P +   + + +   W  +VA+EM++ G   
Sbjct: 173 QIPQDYNNVARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGV-- 230

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V  L D+L+
Sbjct: 231 ----GIGFFIWDAYNSAKVSEIVLALVYVGLVGLLLDKLV 266


>gi|327482790|gb|AEA86100.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 289

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V  ++A +  + +G+ IG        + P  Q+L   P   + PL  S 
Sbjct: 93  WQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPL--SL 150

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             +   +P+   +L +IF T  W I+ N   G    P D++ VA    + G+ +++ I+L
Sbjct: 151 AGFQDSHPS---ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIML 207

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A I +E+   G       G+G +I ++       +++L +
Sbjct: 208 PAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNASRISDIILAL 261

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 262 VYIGVVGFVLDRLV 275



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F + +P        +A+F IF + +W +  +    + 
Sbjct: 130 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SALFVIFITAIWPIIINTAVGIR 181

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V++  +L+G++ F  + +P + P +   + + +   W  ++A+EM++ G   
Sbjct: 182 NIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG--- 238

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F+ D+L+
Sbjct: 239 ---VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 275


>gi|89072206|ref|ZP_01158785.1| putative nitrate transporter [Photobacterium sp. SKA34]
 gi|89051738|gb|EAR57190.1| putative nitrate transporter [Photobacterium sp. SKA34]
          Length = 324

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452
           I+AS+I IP+G+ +G    +     P  QLL       + PLV  V   SY   +P +  
Sbjct: 126 ILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAK 185

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L     +   + W  L N   G +    D   V+    ++ W+  R I+LP   P   
Sbjct: 186 SFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIF 245

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G AW   I +E+ +      +  GLG ++ +  + G   S   +++ V+++  
Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSASSLSRIMVAVVMIGF 299

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 300 IGLMLDRLM 308



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149
           + +L M   PI+ +++ +  L +L    +     Y  K   V  + L ++  +    +W 
Sbjct: 142 NHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWP 201

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    + N+ +DL  VSR  RLS WQ    + +P ++P +   + +S+   W  ++A
Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261

Query: 210 SEMIVVGDTVIPLPGIGSYI 229
           +EM+         PG+G ++
Sbjct: 262 AEMLAQN------PGLGKFV 275


>gi|154246444|ref|YP_001417402.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160529|gb|ABS67745.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
          Length = 298

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L   +  F +  P        +AIF IF + +W +  +    + 
Sbjct: 139 LDPIFQVLRTVPPLAWLPIALAAFRDSNP--------SAIFVIFITAIWPVIINTAVGIR 190

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+  + FW + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 191 NIPQDYRNVALVLRLNPVEFFWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 248

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A++ +  V F+ D+L+
Sbjct: 249 ----GIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLV 284



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   +++ RV V   +A+++ I VG  IG        + P  Q+L   P   + P+ ++ 
Sbjct: 102 WRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPIALA- 160

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   NP+   ++ +IF T  W ++ N   G    P D++ VA    +    ++  I+L
Sbjct: 161 -AFRDSNPS---AIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEFFWKIML 216

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+ + G       G+G +I ++      P++++ +
Sbjct: 217 PSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVAL 270

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 271 VYIGVVGFVLDRLV 284


>gi|87300722|ref|ZP_01083564.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus sp. WH 5701]
 gi|87284593|gb|EAQ76545.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus sp. WH 5701]
          Length = 276

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 15/197 (7%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   I++ RV +   ++ ++ I +G  +G    I     P  Q+L   P   +FP  ++ 
Sbjct: 80  WQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFP--IAL 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +   N +   ++ +IF T  W ++ N   G    P D+  VA    +    + R I++
Sbjct: 138 MVFQDANTS---AVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKRSYIREIVI 194

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVV 556
           P   PY  TG   A G AW A + +E+           G+G +I ++   G   S  +++
Sbjct: 195 PATVPYVFTGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDTSASQII 248

Query: 557 LGVLIMCCFVLALNRFL 573
           L ++ +    LAL+R +
Sbjct: 249 LAIVYVGIVGLALDRLV 265



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +R +G    P++ +++++P L +    ++ F +        A  +A+F IF + +W +  
Sbjct: 110 NRFIGKGFDPVIQVLRTVPPLAWFPIALMVFQD--------ANTSAVFVIFITSIWPVII 161

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP+D   V+R  RL        + +P ++P +   + +++   W  +VA+EM
Sbjct: 162 NTAVGIRQIPQDYTNVARVLRLRKRSYIREIVIPATVPYVFTGLRIAVGLAWLAIVAAEM 221

Query: 213 I 213
           +
Sbjct: 222 L 222


>gi|283781845|ref|YP_003372600.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi
           DSM 6068]
 gi|283440298|gb|ADB18740.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi
           DSM 6068]
          Length = 279

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  ++ +  L +L   +V F     GK   +E AAIF I    +W    +  Q +  I
Sbjct: 126 PVIQFLRPVSPLAWLPLGLVLF-----GK---SEPAAIFTIALCSMWPTVINTAQGVRAI 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+R  RLS W   W + +P ++P +     +S+   W  +VA+EM+        
Sbjct: 178 PQDYLNVARVLRLSSWTMLWKIMLPAALPYMFTGFRLSLGIAWLVIVAAEMLT------G 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +PG+G ++           IL  +LT+  V    D+L+
Sbjct: 232 VPGVGGFLWQEYNSLIYEHILLCILTIGAVGLALDRLM 269



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q +L   W   + + +  +L I+      P+G  +G  P ++    P  Q L       +
Sbjct: 83  QGILRFTWYSLVLVAKGYLLAIVLGA---PLGFALGSSPLLTRMFDPVIQFLRPVSPLAW 139

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    V +    P    ++ +   + W  + N   G  A P D+  VA    ++ W  
Sbjct: 140 LPL--GLVLFGKSEPAAIFTIALC--SMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTM 195

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I+LP   PY  TG   + G AW   + +E+ +         G+G ++ +      + 
Sbjct: 196 LWKIMLPAALPYMFTGFRLSLGIAWLVIVAAEMLT------GVPGVGGFLWQEYNSLIYE 249

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            ++L +L +    LAL+R +
Sbjct: 250 HILLCILTIGAVGLALDRLM 269


>gi|188584197|ref|YP_001927642.1| nitrate ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347695|gb|ACB83107.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           populi BJ001]
          Length = 286

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + S +  R+     ++++   +  TL  +S      L PI  ++++IP L +L  ++  F
Sbjct: 91  HISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAAF 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + F+ +
Sbjct: 151 RDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKI 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ 
Sbjct: 203 MLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIIV 256

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  + F+ D+L+
Sbjct: 257 ALVYVGLIGFVLDRLV 272



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL  S 
Sbjct: 90  WHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL--SL 147

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I+L
Sbjct: 148 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKIML 204

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ +
Sbjct: 205 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 258

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 259 VYVGLIGFVLDRLV 272


>gi|16330083|ref|NP_440811.1| nitrate transport protein NrtB [Synechocystis sp. PCC 6803]
 gi|2501376|sp|P73451|NRTB_SYNY3 RecName: Full=Nitrate transport permease protein nrtB
 gi|1652570|dbj|BAA17491.1| nitrate transport protein; NrtB [Synechocystis sp. PCC 6803]
          Length = 275

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V    A+++ I +GI IG    +   + P  Q+L   P   + P+ ++ +    
Sbjct: 85  SLTRVAVGFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQ--E 142

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   GA   P D++ V+    ++  +++  I+ P   P
Sbjct: 143 AEPS---AIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E+++ ++ +  
Sbjct: 200 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSSLISEIIIALIYVGI 253

Query: 565 FVLALNRFL 573
             L L+RF+
Sbjct: 254 VGLLLDRFI 262



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   S+ +   L PI  ++++IP L +L   +             AE +AIF IF + +W
Sbjct: 106 LIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQE--------AEPSAIFVIFITAIW 157

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +       +P+D   VSR  +LS  Q F+ +  P ++P +   + + +   W  +V
Sbjct: 158 PIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVPYIFTGLRIGIGLSWLAIV 217

Query: 209 ASEMIVVG 216
           A+EM++ G
Sbjct: 218 AAEMLIGG 225


>gi|319782349|ref|YP_004141825.1| nitrate ABC transporter inner membrane subunit [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317168237|gb|ADV11775.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 296

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  I++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 137 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SAIFVIFITSIWPIIINTAVGVR 188

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP D   VSR  RL+ ++ F  + VP + P +   + + +   W  +VA+EM+  G   
Sbjct: 189 NIPEDYRNVSRILRLNQFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 246

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259
               GIG +I  A     L  I+ A L  +GV  F  D+L+
Sbjct: 247 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 282



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 13/201 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD+  + W   I++ RV V   +A+++ + +G  +G        + P  Q+L   P   +
Sbjct: 94  QDI-GLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            PL  S  ++   +P+   ++ +IF T  W I+ N   G    P D++ V+    +  + 
Sbjct: 153 LPL--SLAAFRDSSPS---AIFVIFITSIWPIIINTAVGVRNIPEDYRNVSRILRLNQFE 207

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  I++P   PY  TG     G +W A + +E+ + G       G+G +I ++      
Sbjct: 208 FFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 261

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
           P++++ +  +      L+R +
Sbjct: 262 PDIIVALAYIGVTGFCLDRLV 282


>gi|159185941|ref|NP_356730.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium
           tumefaciens str. C58]
 gi|159141075|gb|AAK89515.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium
           tumefaciens str. C58]
          Length = 297

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V++  RL+  + F+ + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F+ D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLV 283



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 13/205 (6%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H   QD+   + +  +++ RV     +A+I  I +G  IG        + P  Q+L   P
Sbjct: 91  HNGSQDIGLGLRV-LVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVP 149

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488
              + PL  S  ++   NP+   ++ +IF T  W ++ N   G    P D++ VA    +
Sbjct: 150 PLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRL 204

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
               ++  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++  
Sbjct: 205 NQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWN 258

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
               P++++ +  +      L++ +
Sbjct: 259 SSRLPDIIVALAYIGVVGFMLDKLV 283


>gi|317406801|gb|EFV86921.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 205

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV V + +A  I +P+G+ IG    + + + P  Q L       + P+ V      
Sbjct: 18  VSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSWMPIAVMVFGVG 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +P   +  L+ F   W I  N  AG       + ++A S   T W   R++ILPG+  
Sbjct: 78  D-DP---VYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAATRWETLRHVILPGVLG 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G  W   +  E+         + G+G +I ++ ++ ++ E++  VL++  
Sbjct: 134 HILTGVRLAIGILWIVLVPCEMLG------VSAGMGYFILDTRDRLAYSELMAMVLLIGA 187

Query: 565 FVLALN 570
              AL+
Sbjct: 188 LGFALD 193


>gi|226940110|ref|YP_002795183.1| binding-protein-dependent transport systems inner membrane
           component [Laribacter hongkongensis HLHK9]
 gi|226715036|gb|ACO74174.1| binding-protein-dependent transport systems inner membrane
           component [Laribacter hongkongensis HLHK9]
          Length = 272

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M+RVVV  ++ + + +P+G+ +G  P + +   P  Q+L   P   + PL +       
Sbjct: 79  SMYRVVVGFLVGAGLALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAI------- 131

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  L       L+  G  + +L N IAG +     +   A +  +  W  +  +I
Sbjct: 132 ----LWFGLGNPPSFFLISIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVI 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY + G     G A+   IVSE+ +         GLG  I E+ E     +++ G
Sbjct: 188 LPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAG 241

Query: 559 VLIMCCFVLALN 570
           +L +    LA++
Sbjct: 242 MLTIGLLGLAID 253


>gi|110833713|ref|YP_692572.1| nitrate ABC transporter permease [Alcanivorax borkumensis SK2]
 gi|110646824|emb|CAL16300.1| nitrate ABC transporter permease protein [Alcanivorax borkumensis
           SK2]
          Length = 333

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 15/198 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++AS+I IP+GI IG      + + P  QL        + PLV   VS  Y   +P +  
Sbjct: 135 LLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLAWLPLVTMVVSALYVTDDPMVAK 194

Query: 453 SLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L    T      W  L N   G ++   D   V+    +      R I+LP   P   
Sbjct: 195 SFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLVLRLNALSHIRKIVLPSALPMMF 254

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS     LG +++   V+
Sbjct: 255 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LGRIMVAVIVI 306

Query: 568 ALNRFLWHPLYLYGTRCL 585
            L  FL   L L   R L
Sbjct: 307 GLIGFLLDRLMLMLQRAL 324


>gi|46200802|ref|ZP_00056318.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 277

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F          A+ +AIF IF + VW +  +    + 
Sbjct: 123 LDPIFQVLRTVPPLAWLPISLAAFRQ--------ADPSAIFVIFITSVWPIILNTAVGVR 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RLS  + F+ + +P ++P +   + + +   W  +VA+EM++ G   
Sbjct: 175 NIPQDYRNVAAVLRLSPLEFFFKIVIPATVPYIFTGLKIGIGLSWLAIVAAEMLIGGV-- 232

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F+ D+++
Sbjct: 233 ----GIGFFIWDAWNSSLMSEIILALIYVGLVGFMLDRMI 268



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   ++++  + +G+ IG        + P  Q+L   P   + P  +S  ++  
Sbjct: 91  SLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLP--ISLAAFRQ 148

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +P+   ++ +IF T  W I+ N   G    P D++ VA+   ++   ++  I++P   P
Sbjct: 149 ADPS---AIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFKIVIPATVP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L ++ +  
Sbjct: 206 YIFTGLKIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLMSEIILALIYVGL 259

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 260 VGFMLDRMI 268


>gi|149928370|ref|ZP_01916610.1| nitrate transport permease [Limnobacter sp. MED105]
 gi|149822905|gb|EDM82151.1| nitrate transport permease [Limnobacter sp. MED105]
          Length = 288

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 129 LDPLFQVLRTVPPLAWLPLSLAGFQDGNP--------SAIFVIFITAIWPIIINTSVGIR 180

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           NIP D   VSR  + +G + FW + +P + P +   + + +   W  +VA+EM++ G
Sbjct: 181 NIPEDYRNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG 237



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476
           + P  Q+L   P   + PL  S   +   NP+   ++ +IF T  W I+ N   G    P
Sbjct: 129 LDPLFQVLRTVPPLAWLPL--SLAGFQDGNPS---AIFVIFITAIWPIIINTSVGIRNIP 183

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++ V+      G  ++  I+LP   PY  +G     G +W A + +E+   G      
Sbjct: 184 EDYRNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG------ 237

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            G+G +I ++       ++VL ++ +      L+R
Sbjct: 238 VGIGFFIWDAWNSSLISDIVLALVYVGIVGFILDR 272


>gi|144898341|emb|CAM75205.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Magnetospirillum gryphiswaldense MSR-1]
          Length = 172

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 14/169 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            +S+     L PI  +++++P L +L  ++  F          A+ +AIF IF + VW +
Sbjct: 9   GQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFK--------AADPSAIFVIFITSVWPI 60

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    + NIP+D   V+   RLS  + F  + +P S+P +   + + +   W  +VA+
Sbjct: 61  ILNTAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAA 120

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           EM++ G       GIG +I  A     +  I+ A++ +  V F  D+L+
Sbjct: 121 EMLIGGV------GIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 12/157 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476
           + P  Q+L   P   + P  +S  ++   +P+   ++ +IF T  W I+ N   G    P
Sbjct: 18  LDPIFQVLRTVPPLAWLP--ISLAAFKAADPS---AIFVIFITSVWPIILNTAVGVRNIP 72

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++ VA+   ++   ++  I +P   PY  TG     G +W A + +E+   G      
Sbjct: 73  QDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAAEMLIGG------ 126

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G +I ++       E++L ++ +     AL+R +
Sbjct: 127 VGIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163


>gi|307823608|ref|ZP_07653837.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
 gi|307735593|gb|EFO06441.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
          Length = 338

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 22/206 (10%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY D ++       +++ V    +IA++I +P+G++ G  P  +S I P  Q+       
Sbjct: 125 TYLDKIFT------SLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPL 178

Query: 432 VFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + P+V   VS  ++  +        L  ++ +   + W  L N   G S+   D   V 
Sbjct: 179 AWLPIVTLVVSAVYVTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVG 238

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++     + IILP   PY  TG   + G  W   I +E+ +      +  GLG ++
Sbjct: 239 KVLRLSWSTQIKKIILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFV 292

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
            +  + GS     LG +++  F + L
Sbjct: 293 WDEFQNGSSNS--LGRIMVAVFTIGL 316


>gi|305662629|ref|YP_003858917.1| ABC-type anion transport system duplicated permease component
           [Ignisphaera aggregans DSM 17230]
 gi|304377198|gb|ADM27037.1| ABC-type anion transport system duplicated permease component
           [Ignisphaera aggregans DSM 17230]
          Length = 263

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNV-IAGASAFPND 478
            +++L++  A +++P + S     ++ P L +SL ++F GT WYI+FNV ++  S     
Sbjct: 118 LSEILSSISAFLWWP-IFSLALLNNILPPLIVSLFIMFQGTAWYIVFNVPLSPPSESEKR 176

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             E+AS + ++G++ +  I +P + P  + G   A GGAWN++I +E AS
Sbjct: 177 LLEMASVYRLSGFKKFSKIFIPSMMPRILAGLSAAWGGAWNSTIAAEYAS 226



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 16/148 (10%)

Query: 73  LSAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFM 124
           LS + I +  +F   +LAA     KS+    +LV + +I+ SI    FL    F++    
Sbjct: 83  LSRVTIVIFISFTVISLAAFYVYGKSKYAKYILVLLSEILSSIS--AFLWWPIFSLALLN 140

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGWQKFWYL 183
           N+ P  ++     ++F +F    W + F++  S      + L E++  +RLSG++KF  +
Sbjct: 141 NILPPLIV-----SLFIMFQGTAWYIVFNVPLSPPSESEKRLLEMASVYRLSGFKKFSKI 195

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +P  MP ++  +  +  G W   +A+E
Sbjct: 196 FIPSMMPRILAGLSAAWGGAWNSTIAAE 223


>gi|332716622|ref|YP_004444088.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3]
 gi|325063307|gb|ADY66997.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3]
          Length = 297

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V++  RL+  + F+ + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 190 NIPQDYRNVAKVLRLNQIEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A+  +  V F+ D+L+
Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLV 283



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)

Query: 370 HFTYQDVLYVIWLGC---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           H   QD    I LG    +++ RV     +A+I  I +G  IG        + P  Q+L 
Sbjct: 91  HNGSQD----IGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLR 146

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASS 485
             P   + PL  S  ++   NP+   ++ +IF T  W ++ N   G    P D++ VA  
Sbjct: 147 TVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKV 201

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +    ++  I+LP   PY  TG     G +W A + +E+ + G       G+G +I +
Sbjct: 202 LRLNQIEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWD 255

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +      P++++ +  +      L++ +
Sbjct: 256 AWNSSRLPDIIVALAYIGVVGFMLDKLV 283


>gi|218248421|ref|YP_002373792.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|257061488|ref|YP_003139376.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|218168899|gb|ACK67636.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|256591654|gb|ACV02541.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 280

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   SR   +++ PI+ +++ +  L +L   +  F NL       AE +AIF IF + +W
Sbjct: 107 LIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAMF-NL-------AEPSAIFVIFITSLW 158

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           +   +    + ++PRD  EVS+   ++  ++ W + +P S+P +   + +S+   W  +V
Sbjct: 159 STIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIILPASLPYIFTGLRISLGIAWLVIV 218

Query: 209 ASEMIVVG 216
           A EM+  G
Sbjct: 219 AVEMLTGG 226



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           WL   ++ RV +  ++ + + IPVG+ IG        I P  Q+L       + P+ ++ 
Sbjct: 81  WLLLASLRRVSIGFLLGAAVAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAM 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +    +     ++ +IF T  W  + N   G ++ P D+ EV+    +   R    IIL
Sbjct: 141 FNLAEPS-----AIFVIFITSLWSTIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIIL 195

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG   + G AW   +  E+ + G       G+G ++ +   + +   V L V
Sbjct: 196 PASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAV 249

Query: 560 LIMCCFVLALNRFL 573
           L++    L L+  L
Sbjct: 250 LVIGLTGLVLDYIL 263


>gi|319893575|ref|YP_004150450.1| ABC transporter permease protein [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317163271|gb|ADV06814.1| ABC transporter permease protein [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 254

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 10/187 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R +V  +IA ++ IP+GI +G    +   I+P  Q +       + P +V      
Sbjct: 62  ISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGI- 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +L    ++     + I+FN I G     N + ++A + ++ GW  +R II PG F 
Sbjct: 121 ---GSLPAIFIIFIAAFFPIVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFK 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + ++G   A G +W   +  E+          +GLG  I +S    +  +V+  +  +  
Sbjct: 178 HIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSAIFFIGI 231

Query: 565 FVLALNR 571
           F   ++R
Sbjct: 232 FGFLIDR 238


>gi|117617477|ref|YP_857899.1| nitrate transporter component [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117558884|gb|ABK35832.1| nitrate transporter component [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 314

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 16/186 (8%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-- 453
           +A++I IP G+ +G    +     P  QLL       + P++   VS  + +P  WL+  
Sbjct: 117 LATLIAIPCGVLLGMNQGLYRAANPVIQLLKPVSPLAWLPIITLVVSALYASPTPWLAKS 176

Query: 454 -----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L +   + W  L N   G +    D   V+    ++     R I+LPG  P   T
Sbjct: 177 FLTSALTVTLCSLWPTLINTAVGVAGLDRDLHNVSRVLRLSFVTHVRRIVLPGALPMIFT 236

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCF 565
           G   + G AW   I +E+ +      +  GLG ++ +  + G   S   +++ V+ +   
Sbjct: 237 GLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQSGGSASLARIMVAVITIGLI 290

Query: 566 VLALNR 571
             AL+R
Sbjct: 291 GCALDR 296


>gi|83590814|ref|YP_430823.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573728|gb|ABC20280.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 266

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           GY++ H              I++ RV +   IA  I +P+G+ +   P +++ ++PF ++
Sbjct: 63  GYLLKHV------------LISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRI 110

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL    + ++ L     +  ++  G+ + +L N   G         E A 
Sbjct: 111 FGPIPGIAWVPL---AILWFGLGDKAAI-FIITMGSVFPVLINTYQGMKDVDQTLIEAAR 166

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +     W+    +ILP + PY VTG     G AW   I +E+           GLG  + 
Sbjct: 167 TMGAGPWQLLSRVILPSLIPYLVTGFRVGLGFAWRVVIAAEMVG------VPNGLGYMLG 220

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                G     ++ ++++   +L +   ++ PL
Sbjct: 221 VGRGTGRTDITIITMVVLGAIMLVVEELIFAPL 253



 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 6/130 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            + AAIF I    V+ +  + YQ + ++ + L E +R+     WQ    + +P  +P LV
Sbjct: 130 GDKAAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSRVILPSLIPYLV 189

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
               + +   W  V+A+EM+ V + +  + G+G          D+  I   M+ +  ++ 
Sbjct: 190 TGFRVGLGFAWRVVIAAEMVGVPNGLGYMLGVGR----GTGRTDITII--TMVVLGAIML 243

Query: 254 LYDQLLFRPM 263
           + ++L+F P+
Sbjct: 244 VVEELIFAPL 253


>gi|319949524|ref|ZP_08023574.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4]
 gi|319436814|gb|EFV91884.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4]
          Length = 231

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 91/187 (48%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R+V  + +A+++ +P+G+W+G R    +   P  Q L       + P+ ++    
Sbjct: 42  AVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSWAPVAIAVFGI 101

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +  P ++L   +     W I+ +  +G  A    + +VA +   +GW     +++P + 
Sbjct: 102 GN-EPVIFL---VAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGASGWERLTRVVIPAVR 157

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G AW   + +E+     + +R +GLG  I  + ++ ++ +V+  +L++ 
Sbjct: 158 PAILGGIRLALGTAWIVLVPAEM-----LGVR-SGLGYQILNARDQLAYDQVMAVILVIG 211

Query: 564 CFVLALN 570
               AL+
Sbjct: 212 VLGFALD 218



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 8/160 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           LD   L   A+ +  R+++ + ++ L            RR   V  P++  ++ I  L +
Sbjct: 32  LDRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSW 91

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +  F        IG E   IF +  + +W +  S    +  +     +V+R+   S
Sbjct: 92  APVAIAVFG-------IGNE-PVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGAS 143

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           GW++   + +P   P ++  + +++   W  +V +EM+ V
Sbjct: 144 GWERLTRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLGV 183


>gi|294011624|ref|YP_003545084.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Sphingobium japonicum UT26S]
 gi|292674954|dbj|BAI96472.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Sphingobium japonicum UT26S]
          Length = 324

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)

Query: 369 NHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
            HF+ QD   V   G +  ++ RV++   IA++I + +GI IG        + P  Q+L 
Sbjct: 117 THFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLR 176

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASS 485
             P   + P  +S   +    P+   ++ +IF T  W I+ N  AG    P  ++ VA  
Sbjct: 177 TVPPLAWLP--ISLAIFQQAQPS---AIFLIFITAIWPIILNTAAGVQTLPVAYRNVAKV 231

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +    ++  I+LP   P+  TG     G +W A + +E+   G      TG+G +I +
Sbjct: 232 LALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFIWD 285

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           S       + ++ ++ +     AL+R +
Sbjct: 286 SYNSSLLTDTIVALIWIGMVGFALDRIV 313



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  +++++P L +L  ++  F    P        +AIF IF + +W +  +    + 
Sbjct: 168 LDPLFQVLRTVPPLAWLPISLAIFQQAQP--------SAIFLIFITAIWPIILNTAAGVQ 219

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P     V++   L+  + F  + +P ++P +   + + +   W  +VA+EM+  G  V
Sbjct: 220 TLPVAYRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGTGV 279


>gi|86608094|ref|YP_476856.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556636|gb|ABD01593.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 275

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +    A+++ I +GI +G    I+  + P  Q L      +  PL    +S   
Sbjct: 87  SLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFL-----RMVAPLAWVPISLAA 141

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L  N   +L +IF T  W IL N   G    P D+  V+    ++   ++  ++LP   P
Sbjct: 142 LQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A I +E+   G       G+G +I ++ ++    E+++ V+ +  
Sbjct: 202 YMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGA 256

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 257 VGLLLDRLM 265



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 9/135 (6%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AA+F IF + +W +  +    +  IP D   VS+  +LS    F+ + +P ++P +  
Sbjct: 146 EPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSALPYMFT 205

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +   W  ++A+E+++ G     +PGIG +I  A ++  +  I+ A++ +  V  L
Sbjct: 206 GLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGAVGLL 260

Query: 255 YDQLLFRPMIVWSNK 269
            D+L    M V  NK
Sbjct: 261 LDRL----MSVLQNK 271


>gi|118591229|ref|ZP_01548628.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118436305|gb|EAV42947.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 360

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA++I +P+GI  G     +  I P  Q+        + P+V   VS  + +P  WLS 
Sbjct: 165 LIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPLAWLPIVTMIVSATYADPVDWLSK 224

Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            ++         + W  L N   G ++   D   V     +  W+    ++LP   P   
Sbjct: 225 SLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTVTKLVLPSSLPLIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S  ++++ VL +  
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGI 338

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 339 IGFMLDRLM 347



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 15/213 (7%)

Query: 57  DVHSLPQYASR--TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           D    P Y  +  T+L+ +    +I+ L        +  SR     + P++ I + +  L
Sbjct: 142 DYTGKPTYIDQIGTSLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPL 201

Query: 114 GFLTFTVVYFMNLYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
            +L    +     Y   V     + L +   +    +W    +    + ++ +DL  V R
Sbjct: 202 AWLPIVTMIVSATYADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGR 261

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
             +L  W+    L +P S+P +   + +S+  GW  ++A+EM+         PG+G ++ 
Sbjct: 262 VLQLPTWKTVTKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVW 315

Query: 231 LAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
              +    Q L  I+ A+LT+  + F+ D+L+F
Sbjct: 316 DEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMF 348


>gi|170741903|ref|YP_001770558.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           sp. 4-46]
 gi|168196177|gb|ACA18124.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           sp. 4-46]
          Length = 288

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  ++++IP L +L  ++  F +  P        +AIF IF + 
Sbjct: 116 GTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 167

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D   V+   RL+ ++ F  + +P + P +   + + +   W  
Sbjct: 168 IWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIMLPSAAPYIFTGLRIGVGLSWLA 227

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  + F+ D+++
Sbjct: 228 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGVIGFVLDRVV 274



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 12/187 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +AS+  + +G  +G        + P  Q+L   P   + PL  S  ++  
Sbjct: 97  SLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 154

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D++ VAS   +  + ++  I+LP   P
Sbjct: 155 GQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIMLPSAAP 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E+++ ++ +  
Sbjct: 212 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVALVYVGV 265

Query: 565 FVLALNR 571
               L+R
Sbjct: 266 IGFVLDR 272


>gi|27366831|ref|NP_762358.1| nitrate ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|37676610|ref|NP_937006.1| nitrate transporter system, permease component [Vibrio vulnificus
           YJ016]
 gi|320158715|ref|YP_004191093.1| nitrate ABC transporter permease [Vibrio vulnificus MO6-24/O]
 gi|27358398|gb|AAO07348.1| Nitrate ABC transporter, permease protein [Vibrio vulnificus CMCP6]
 gi|37201153|dbj|BAC96976.1| nitrate transporter system, permease component [Vibrio vulnificus
           YJ016]
 gi|319934027|gb|ADV88890.1| nitrate ABC transporter permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 322

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 16/187 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++AS+I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 124 MLASLIAIPLGIILGLNQGLYMAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPLFAK 183

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ WR  R I+LP   P   
Sbjct: 184 SFVNSLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIVLPSAIPMMF 243

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G AW   I +E+ +      +  GLG ++ +  + G   S   +++ V+++  
Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRIMVAVIVIGL 297

Query: 565 FVLALNR 571
             L L+R
Sbjct: 298 IGLLLDR 304



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           ++F +    +W    +    + ++ +DL  VS+  RLS W+    + +P ++P +   + 
Sbjct: 188 SLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIVLPSAIPMMFTGLR 247

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +S+   W  ++A+EM+         PG+G ++
Sbjct: 248 LSLGIAWMVLIAAEMLAQN------PGLGKFV 273


>gi|158423902|ref|YP_001525194.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
 gi|158330791|dbj|BAF88276.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
          Length = 273

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V + IA  + +PVG+ +G      +   P  Q L       + P+ V      
Sbjct: 83  VSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGVG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  L+ F T W IL    AG       +  V+ S   TGW     +ILP I  
Sbjct: 143 DAP----IYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAILG 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G AW   +  E+         + GLG +I ++ ++ ++PE++  +L++  
Sbjct: 199 HVLTGVRLAIGIAWIVLVPCEMLGV------SAGLGYFILDTRDRLAYPELMATILVIGI 252

Query: 565 FVLALN 570
              AL+
Sbjct: 253 IGFALD 258


>gi|307151917|ref|YP_003887301.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982145|gb|ADN14026.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 302

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 18/181 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV V   +ASI+ IP+GI +G    I + ++P   L+   PA  F PL++  +    
Sbjct: 110 SLWRVGVGFFLASILSIPLGILMGSYATIRALLEPIFGLMRYMPAPAFIPLLILYLGVGE 169

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   LL+  G  ++    V+      P D  E  S++ + G RW   I +  IFP+
Sbjct: 170 -EPKI---LLIFIGVFFFNALMVMDTVKFVPKDLIE--STYMLGGNRWQTLIQV--IFPH 221

Query: 506 YVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            V G I AC      AW   IVSE+ +       T GLG  I+ +       E+ +G+++
Sbjct: 222 VVPGIIDACRINLAAAWQLVIVSELIA------STEGLGRRISVAGRFLRTDEIFVGLIV 275

Query: 562 M 562
           +
Sbjct: 276 I 276



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 28/179 (15%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           YAT+ A       +L PI  +M+ +P   F+   ++Y         +G E   I  IF  
Sbjct: 135 YATIRA-------LLEPIFGLMRYMPAPAFIPLLILYLG-------VGEE-PKILLIFIG 179

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             +     +  ++  +P+DL E +     + WQ    +  P  +PG++    ++++  W 
Sbjct: 180 VFFFNALMVMDTVKFVPKDLIESTYMLGGNRWQTLIQVIFPHVVPGIIDACRINLAAAWQ 239

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            V+ SE+I   +      G+G  I++A   ++  +    ++  L ++GVI L+  LLF+
Sbjct: 240 LVIVSELIASTE------GLGRRISVAGRFLRTDE----IFVGLIVIGVIGLFFDLLFQ 288


>gi|288932110|ref|YP_003436170.1| binding-protein-dependent transporters inner membrane component
           [Ferroglobus placidus DSM 10642]
 gi|288894358|gb|ADC65895.1| binding-protein-dependent transport systems inner membrane
           component [Ferroglobus placidus DSM 10642]
          Length = 253

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 107/206 (51%), Gaps = 15/206 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A+ + LR+L+   ++   +     L   SR   + L P +++++ IP L ++  
Sbjct: 47  KTLLQHAASSLLRVLAGATVAFSLSIPLGILMWFSRTYNL-LHPAIEVLRPIPPLAWIPL 105

Query: 119 TVVYFMNLYPGKVIGAEL--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           + + F + +P   + A++   A+ A F S V   T S Y  +  IP++  E+++ F    
Sbjct: 106 SYILFAS-FPNPTVFAQIFIVAVGAFFPSFV---TISDY--VRGIPQEFIELAKVFGARN 159

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +     + +P+S+PG++  + + +  GW  ++A+EMI    +     G+G +I +  +  
Sbjct: 160 FDLLTKIVLPYSLPGIITGIRVGLGVGWMSIIAAEMIASSGS-----GLGYFILVMYEVG 214

Query: 237 DLLAILYAMLTMLGVI-FLYDQLLFR 261
             +  + A + M+G+I +L + LLF+
Sbjct: 215 GRMPEILAGMAMIGLIGYLMNTLLFK 240



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    +A  + IP+GI + F     + + P  ++L   P   + PL     + + 
Sbjct: 56  SLLRVLAGATVAFSLSIPLGILMWFS-RTYNLLHPAIEVLRPIPPLAWIPLSYILFASFP 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP ++  + ++    ++  F  I+      P +F E+A  F    +     I+LP   P
Sbjct: 115 -NPTVFAQIFIVAVGAFFPSFVTISDYVRGIPQEFIELAKVFGARNFDLLTKIVLPYSLP 173

Query: 505 YYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTE-KGSFPEVVLGVLIM 562
             +TG     G  W + I +E +AS G      +GLG +I    E  G  PE++ G+ ++
Sbjct: 174 GIITGIRVGLGVGWMSIIAAEMIASSG------SGLGYFILVMYEVGGRMPEILAGMAMI 227

Query: 563 CCFVLALNRFLWH 575
                 +N  L+ 
Sbjct: 228 GLIGYLMNTLLFK 240


>gi|332994482|gb|AEF04537.1| putative nitrate ABC transporter permease [Alteromonas sp. SN2]
          Length = 331

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V+V  +IAS+I +PVGI  G      + I P  QL        + PLV   VS  +
Sbjct: 124 SLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLFKPVSPLAWLPLVTMVVSALY 183

Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   S       L +     W  L N   G SA   D   V+    +T       II
Sbjct: 184 VSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKDLLNVSKVLRLTPMSHLTKII 243

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +      L+R +
Sbjct: 298 MVAVLTIGAIGFILDRIM 315



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 9/103 (8%)

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           I +DL  VS+  RL+       + +P S+P +   + +S+  GW  ++A+EM+       
Sbjct: 220 IDKDLLNVSKVLRLTPMSHLTKIILPSSIPMIFTGLRLSLGIGWMVLIAAEMLAQN---- 275

Query: 221 PLPGIGSYIALAIK---EQDLLAILYAMLTMLGVIFLYDQLLF 260
             PG+G ++    +    + L  I+ A+LT+  + F+ D+++ 
Sbjct: 276 --PGLGKFVWDEFQNGSSESLARIMVAVLTIGAIGFILDRIML 316


>gi|284990967|ref|YP_003409521.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284064212|gb|ADB75150.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 258

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A++  + +GI IG    +   ++P  +L  A P  V  P+ +     + 
Sbjct: 60  SLLRLAAGFSVAAVSAVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILV---FG 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++  + + +++ FG  W IL N   G  A      + A ++ ITG    R+++LPG  P 
Sbjct: 117 IDDTMKV-IVIAFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQ 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
              G   A   A    ++SE+ +       T GLG  I ++    + PE+  G+L++
Sbjct: 176 IFAGLRQALSLAIILMVISELFA------ATNGLGFAIVQAQRSFAIPEMWAGMLVL 226


>gi|294649103|ref|ZP_06726545.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292824986|gb|EFF83747.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 302

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V+   +I+S+I IPVG+  G  P+    + P  Q+        + P+V   V+  +
Sbjct: 95  SLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASLY 154

Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++P   LS       + +   T W  L N + G      DF  V+   +++ +     I+
Sbjct: 155 VHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKIV 214

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           LP I P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS
Sbjct: 215 LPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 261



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 10/166 (6%)

Query: 68  TTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           T+L+ +L+A +IS +       L   S      L P++ I + I  L +L    +   +L
Sbjct: 94  TSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASL 153

Query: 127 YPGKVIGAELAAIFAIFT---SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           Y   + G   + + +  T     +W    +    +  I +D   VS+   LS +     +
Sbjct: 154 YVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKI 213

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +P  +P L   + +S+  GW  ++A+EM+         PG+G ++
Sbjct: 214 VLPAIIPMLFTGLRLSVGVGWMVLIAAEMLAQN------PGLGKFV 253


>gi|226951848|ref|ZP_03822312.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC
           27244]
 gi|226837388|gb|EEH69771.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC
           27244]
          Length = 302

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V+   +I+S+I IPVG+  G  P+    + P  Q+        + P+V   V+  +
Sbjct: 95  SLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASLY 154

Query: 446 LNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++P   LS   +         T W  L N + G      DF  V+   +++ +     I+
Sbjct: 155 VHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKIV 214

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           LP I P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS
Sbjct: 215 LPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 261


>gi|325110800|ref|YP_004271868.1| binding-protein-dependent transporters inner membrane component
           [Planctomyces brasiliensis DSM 5305]
 gi|324971068|gb|ADY61846.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces brasiliensis DSM 5305]
          Length = 253

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           C+++ RV    ++A+++ I +G  IG        +    Q L   P   +FPL V     
Sbjct: 56  CVSLLRVFEGFLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGI 115

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++       ++  G  + IL NVI G     + + E+A  + I  W+++R +I+PG  
Sbjct: 116 GEVSK----VFIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGAM 171

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           P  +TG     G AW   + +E+ +        +G+G  I ++ +      V++G+L
Sbjct: 172 PSILTGLRVGIGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGML 222


>gi|315179819|gb|ADT86733.1| nitrate transporter system, permease component [Vibrio furnissii
           NCTC 11218]
          Length = 322

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 13/163 (7%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLS 453
           +AS+I IP+GI +G    +   + P  QLL       + P+V   VS  Y   +P    S
Sbjct: 125 LASLIAIPLGIVLGLNHGLYQAVNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAKS 184

Query: 454 -----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   T
Sbjct: 185 FVNSLLTVALCSVWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFT 244

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           G   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 245 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           VW    +    + ++ +DL  VS+  RLS WQ    + +P ++P +   + +S+   W  
Sbjct: 197 VWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 256

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 257 LIAAEMLAQN------PGLGKFV 273


>gi|261855716|ref|YP_003262999.1| binding-protein-dependent transporters inner membrane component
           [Halothiobacillus neapolitanus c2]
 gi|261836185|gb|ACX95952.1| binding-protein-dependent transport systems inner membrane
           component [Halothiobacillus neapolitanus c2]
          Length = 320

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           I+AS+I IP+GI IG    + + + P  Q+L       + PLV   VS  Y   +P    
Sbjct: 122 ILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPLAWLPLVTIVVSALYASNDPMFSK 181

Query: 453 SLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L+   T      W  + N   G +A   D   V+    +  W   R I++P   P   
Sbjct: 182 SYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSRVLRLNWWTHVRKIVVPSALPMMF 241

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   +   AW   I +E+ +      +  GLG ++ +  + G   S   +++ V+++  
Sbjct: 242 TGLRLSLSIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLSRIMVAVVVIGL 295

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 296 IGFMLDRTM 304



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 22/224 (9%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPIL 113
           P     T +  +   ++++L  F+ A+L A         S  L   + PI+ I++ +  L
Sbjct: 99  PYTGQPTFVSQIGTSLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPL 158

Query: 114 GFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
            +L    +    LY         + L ++  +    +W    +    +  I +DL  VSR
Sbjct: 159 AWLPLVTIVVSALYASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSR 218

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI- 229
             RL+ W     + VP ++P +   + +S+S  W  ++A+EM+         PG+G ++ 
Sbjct: 219 VLRLNWWTHVRKIVVPSALPMMFTGLRLSLSIAWMVLIAAEMLAQN------PGLGKFVW 272

Query: 230 -ALAIKEQDLLAILYAMLTMLGVI-FLYDQ--LLFRPMIVWSNK 269
                   D L+ +   + ++G+I F+ D+  LL +  I W  K
Sbjct: 273 DEFQNGSSDSLSRIMVAVVVIGLIGFMLDRTMLLLQRWISWDKK 316


>gi|209526508|ref|ZP_03275034.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
 gi|209493014|gb|EDZ93343.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
          Length = 410

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L PI  I+++IP L +L  ++  F    P        +AIF IF + +W +  +  + +
Sbjct: 253 ALDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGV 304

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             IP+D   VSR  RL     F+ +  P ++P +   + + +   W  ++A+EM++ G  
Sbjct: 305 RQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG-- 362

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                GIG +I  A     +  I+ A++ +  V  L D+ +
Sbjct: 363 ----VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 399



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466
           IG    +   + P  Q+L   P   + P  +S   +   NP+   ++ +IF T  W I+ 
Sbjct: 244 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 298

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G    P D+  V+    +    ++  I+ P   PY  TG     G +W A I +E+
Sbjct: 299 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 358

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       G+G +I ++       +++L V+ +    L L++F+
Sbjct: 359 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 399


>gi|13472532|ref|NP_104099.1| nitrate transporter component, nrtB [Mesorhizobium loti MAFF303099]
 gi|14023278|dbj|BAB49885.1| nitrate transporter component; NrtB [Mesorhizobium loti MAFF303099]
          Length = 298

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  I++++P L +L  ++  F +  P        +A+F IF + +W +  +    + 
Sbjct: 139 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SALFVIFITSIWPIIINTAVGVR 190

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+R  RL+ ++ F  + VP + P +   + + +   W  +VA+EM+  G   
Sbjct: 191 NIPQDYRNVARILRLNPFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 248

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259
               GIG +I  A     L  I+ A L  +GV  F  D+L+
Sbjct: 249 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 284



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 13/201 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD+  + W   I++ RV +   +A+I+ + +G  +G        + P  Q+L   P   +
Sbjct: 96  QDI-GLAWRVLISLQRVAIGFGLAAIVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 154

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            PL  S  ++   +P+   +L +IF T  W I+ N   G    P D++ VA    +  + 
Sbjct: 155 LPL--SLAAFRDSSPS---ALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPFE 209

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  I++P   PY  TG     G +W A + +E+ + G       G+G +I ++      
Sbjct: 210 FFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 263

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
           P++++ +  +      L+R +
Sbjct: 264 PDIIVALAYIGVTGFCLDRLV 284


>gi|192361570|ref|YP_001982783.1| AtsB [Cellvibrio japonicus Ueda107]
 gi|190687735|gb|ACE85413.1| AtsB [Cellvibrio japonicus Ueda107]
          Length = 266

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 16/180 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +R + +++ P+ + ++ +P+LG      ++F N         + A +F I  +  + M  
Sbjct: 99  ARLVALLVNPLYNALRQVPLLGLTPLIGLWFGN--------GDEAKVFIIALAAFYPMVL 150

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + Y+ L N+     EV + +  S WQ+F  +  P ++P LV  +++++   W   + SE+
Sbjct: 151 NSYEGLRNVDGRFREVGQIYGFSRWQQFRLVLWPAALPNLVTGLLLAIPFAWITCIGSEL 210

Query: 213 IVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIFLYD-QLLFRPMIVWSNK 269
           +          G+G+ +  A A    D++ I   ++T+LGV+  Y   +L   ++ W  K
Sbjct: 211 LFNAGA-----GLGNLMMTAEASARMDIILICALVVTLLGVVMNYAVSVLGNYLLRWRGK 265


>gi|56751996|ref|YP_172697.1| sulfonate/nitrate transport system permease [Synechococcus
           elongatus PCC 6301]
 gi|81300915|ref|YP_401123.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|2150109|gb|AAB58737.1| integral membrane protein [Synechococcus elongatus PCC 7942]
 gi|2330515|dbj|BAA21794.1| intrinsic membrane protein [Synechococcus elongatus PCC 7942]
 gi|56686955|dbj|BAD80177.1| sulfonate/nitrate transport system permease protein [Synechococcus
           elongatus PCC 6301]
 gi|81169796|gb|ABB58136.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
          Length = 263

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 11/179 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L + W   I++ RV +  ++A+++ IP+GI IG     SS   PF QLL       + P+
Sbjct: 65  LGIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPI 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +    +   +  L    +++  + W  L N   G +    DF +V+ S   + WR    
Sbjct: 125 GL----FLFRDSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILK 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +ILP   P  + G   + G AW   + +E+       L  TG+G +I       S P +
Sbjct: 181 VILPAALPSIIAGMRISMGIAWLVIVAAEM-------LLGTGIGYFIWNEWNNLSLPNI 232



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 43/81 (53%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +EL  +F I  S +W    +    + N+  D  +VS+S   S W+    + +P ++P ++
Sbjct: 132 SELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILKVILPAALPSII 191

Query: 194 WNMMMSMSGGWFFVVASEMIV 214
             M +SM   W  +VA+EM++
Sbjct: 192 AGMRISMGIAWLVIVAAEMLL 212


>gi|296271945|ref|YP_003654576.1| nitrate ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096120|gb|ADG92070.1| nitrate ABC transporter, inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
          Length = 269

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 362 QSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           + IG + + F  T QD   + W    ++ RV    I+A II +PVG+ IG   +    ++
Sbjct: 53  EVIGVLSDPFYITNQDDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALE 112

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478
           PF Q+        + PL++    +  +N     ++  IF T  W I+ N   G  +   D
Sbjct: 113 PFIQIFKPVSPLAWLPLLLFV--FQDINAT---AISTIFVTSIWPIIINTSLGVKSVSED 167

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           +  VA     T     R IILP   PY  TG   + G AW   + +E+ + G
Sbjct: 168 YMNVAKVLQFTPLEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGG 219



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/146 (18%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ S  +++++           S+   + L P + I + +  L +L   +  F ++    
Sbjct: 82  RVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSPLAWLPLLLFVFQDI---- 137

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                  AI  IF + +W +  +    + ++  D   V++  + +  +K   + +P ++P
Sbjct: 138 ----NATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTPLEKIRKIILPVAVP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   M +S+   W  +VA+EM+  G
Sbjct: 194 YIFTGMRLSLGIAWLVIVAAEMLTGG 219


>gi|87119186|ref|ZP_01075084.1| putative nitrate transporter [Marinomonas sp. MED121]
 gi|86165577|gb|EAQ66844.1| putative nitrate transporter [Marinomonas sp. MED121]
          Length = 330

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443
           +++ VV    +AS+I IP+GI IG    I S + P  Q+        + PLV   VS  Y
Sbjct: 123 SLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQIFKPVSPLAWLPLVTMVVSATY 182

Query: 444 YHLNPNLWLSLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +P    S L    T      W  L N   G +A   D   V+    +      R I+
Sbjct: 183 VSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDKDLLNVSKVLRLNWLTHVRKIV 242

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           +P   P   TG   + G AW   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 243 VPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 296

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL++      L+R +
Sbjct: 297 MVAVLMIGFIGFVLDRAM 314


>gi|307292771|ref|ZP_07572617.1| nitrate ABC transporter, inner membrane subunit [Sphingobium
           chlorophenolicum L-1]
 gi|306880837|gb|EFN12053.1| nitrate ABC transporter, inner membrane subunit [Sphingobium
           chlorophenolicum L-1]
          Length = 318

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 14/209 (6%)

Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           + HF+ QD   V   G +  ++ RV++   IA++I + +GI IG        + P  Q+L
Sbjct: 110 LTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVL 169

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVAS 484
              P   + P  +S   +    P+   ++ +IF T  W ++ N  AG    P  ++ VA 
Sbjct: 170 RTVPPLAWLP--ISLAIFQQAQPS---AIFLIFITAIWPVILNTAAGVQTIPAAYRNVAK 224

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              +    ++  I+LP   P+  TG     G +W A + +E+   G      TG+G +I 
Sbjct: 225 VLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFIW 278

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +S       + ++ ++ +     AL+R +
Sbjct: 279 DSYNSSLLTDTIVALIWIGMVGFALDRIV 307



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  +++++P L +L  ++  F    P        +AIF IF + +W +  +    + 
Sbjct: 162 LDPLFQVLRTVPPLAWLPISLAIFQQAQP--------SAIFLIFITAIWPVILNTAAGVQ 213

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP     V++   L+  + F  + +P ++P +   + + +   W  +VA+EM+  G  V
Sbjct: 214 TIPAAYRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGTGV 273


>gi|104781070|ref|YP_607568.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110057|emb|CAK14762.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 251

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R++V +++A +I +P+G+ +G   H+ +   P  Q L       + P+VV  +   
Sbjct: 63  VSLKRILVGLVLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVG 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P   +  L+ F   W IL N  AG       + +++ S   T W     +I+PG+  
Sbjct: 123 D-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLCKVIVPGVIG 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G  W   +  E+         + GLG +I ++ ++ ++ E++  VL++  
Sbjct: 179 HVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGV 232

Query: 565 FVLALN 570
               L+
Sbjct: 233 LGFMLD 238


>gi|298290413|ref|YP_003692352.1| nitrate ABC transporter inner membrane subunit [Starkeya novella
           DSM 506]
 gi|296926924|gb|ADH87733.1| nitrate ABC transporter, inner membrane subunit [Starkeya novella
           DSM 506]
          Length = 303

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L   +  F +  P        +AIF IF + +W +  +    + 
Sbjct: 145 LDPIFQVLRTVPPLAWLPIALAAFRDSNP--------SAIFVIFITAIWPVIINTAVGVR 196

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V++  RL+ ++ F  + +P + P +   + + +   W  +VA+EM+  G   
Sbjct: 197 NIPQDYRNVAQVLRLNPFEFFAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 254

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A++ +  V F+ D+L+
Sbjct: 255 ----GIGFFIWDAWNSSRLSDIIVALVYIGVVGFVLDRLV 290



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 361 WQ-SIGYIVNHF---TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           WQ S   IV+ F     QD+  + W   +++ RV +   +A+ + I +G+ IG       
Sbjct: 85  WQDSYDLIVDPFFVNGPQDI-GLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMR 143

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475
            + P  Q+L   P   + P  ++  ++   NP+   ++ +IF T  W ++ N   G    
Sbjct: 144 GLDPIFQVLRTVPPLAWLP--IALAAFRDSNPS---AIFVIFITAIWPVIINTAVGVRNI 198

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D++ VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G     
Sbjct: 199 PQDYRNVAQVLRLNPFEFFAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 253

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I ++       ++++ ++ +      L+R +
Sbjct: 254 -VGIGFFIWDAWNSSRLSDIIVALVYIGVVGFVLDRLV 290


>gi|269963835|ref|ZP_06178149.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831453|gb|EEZ85598.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 321

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A+II IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|284054400|ref|ZP_06384610.1| nitrate ABC transporter, inner membrane subunit [Arthrospira
           platensis str. Paraca]
          Length = 291

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  I+++IP L +L  ++  F    P        +AIF IF + +W +  +  + + 
Sbjct: 135 LDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGVR 186

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   VSR  RL     F+ +  P ++P +   + + +   W  ++A+EM++ G   
Sbjct: 187 QIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV-- 244

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V  L D+ +
Sbjct: 245 ----GIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 280



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466
           IG    +   + P  Q+L   P   + P  +S   +   NP+   ++ +IF T  W I+ 
Sbjct: 125 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 179

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G    P D+  V+    +    ++  I+ P   PY  TG     G +W A I +E+
Sbjct: 180 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 239

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       G+G +I ++       +++L V+ +    L L++F+
Sbjct: 240 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 280


>gi|134300613|ref|YP_001114109.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134053313|gb|ABO51284.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 252

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++RV++ ++ A+++ +P+GI++G  P +  K  P   L    P  VF P+ +  +   
Sbjct: 61  VSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAPLLYLTYPIPKVVFMPIFLIILGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  L ++L+    T + IL      A     ++     S   + W  +R++ LPG  P
Sbjct: 121 DSSKILLITLI----TFYQILVTTRDAAKNMAKEYIFSLKSLGASSWDLYRHVYLPGCLP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +T      G A     ++E       +   TG+G +I +S  + ++ E+  G++ M
Sbjct: 177 AILTALRLGLGTAMAVLFLAET------YATQTGIGFFIMDSLSRMNYEEMFAGIIAM 228


>gi|227533843|ref|ZP_03963892.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188544|gb|EEI68611.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 283

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+ +  V+ P++D MQ++P   +L   V +F +
Sbjct: 98  TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  +GWQ+   +
Sbjct: 158 GMVPGVV----ASVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434
           T+  V+   ++A +I +P+GIW      +S+ ++P   F Q + AF    PA  FF    
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P VV+ V  + + P + ++ L               G +  P D  E A +F  TGW+ 
Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203

Query: 494 WRYIILP 500
              + LP
Sbjct: 204 LLKVQLP 210


>gi|11498247|ref|NP_069473.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649975|gb|AAB90597.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 248

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 10/204 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A  +  R+L+A  ++         ++  +R L   + P ++ ++ IP L ++  
Sbjct: 45  KTLVQHAVASLFRVLAASFLAFSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPL 104

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + F  L P  V   E++ IF +F    +    S++    N+P +L E++  F+     
Sbjct: 105 AYIIFAPL-PNTV---EVSQIFIVFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERL 160

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP S+ G++  + + +  GW  ++A+EMI          G+G +I +       
Sbjct: 161 IITDIVVPHSLQGIMSGVRIGLGVGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGR 215

Query: 239 LAILYAMLTMLGVI-FLYDQLLFR 261
            A + A + M+G+I ++ + LL R
Sbjct: 216 TAEIVAGMAMIGIIGYMMNWLLLR 239


>gi|291571065|dbj|BAI93337.1| nitrate ABC-type transport permease protein [Arthrospira platensis
           NIES-39]
          Length = 278

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  I+++IP L +L  ++  F    P        +AIF IF + +W +  +  + + 
Sbjct: 122 LDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGVR 173

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D   VSR  RL     F+ +  P ++P +   + + +   W  ++A+EM++ G   
Sbjct: 174 QIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG--- 230

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V  L D+ +
Sbjct: 231 ---VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 267



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466
           IG    +   + P  Q+L   P   + P  +S   +   NP+   ++ +IF T  W I+ 
Sbjct: 112 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 166

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G    P D+  V+    +    ++  I+ P   PY  TG     G +W A I +E+
Sbjct: 167 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 226

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       G+G +I ++       +++L V+ +    L L++F+
Sbjct: 227 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 267


>gi|191639085|ref|YP_001988251.1| Putative glycine betaine membrane transport protein GbuB (GbuB
           protein) [Lactobacillus casei BL23]
 gi|190713387|emb|CAQ67393.1| Putative glycine betaine membrane transport protein GbuB (GbuB
           protein) [Lactobacillus casei BL23]
 gi|327383149|gb|AEA54625.1| hypothetical protein LC2W_2294 [Lactobacillus casei LC2W]
 gi|327386333|gb|AEA57807.1| hypothetical protein LCBD_2312 [Lactobacillus casei BD-II]
          Length = 283

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+ +  V+ P++D MQ++P   +L   V +F +
Sbjct: 98  TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  +GWQ+   +
Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434
           T+  V+   ++A +I +P+GIW      +S+ ++P   F Q + AF    PA  FF    
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P VV+ V  + + P + ++ L               G +  P D  E A +F  TGW+ 
Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203

Query: 494 WRYIILP 500
              + LP
Sbjct: 204 LLKVQLP 210


>gi|260464097|ref|ZP_05812291.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259030082|gb|EEW31364.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 296

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  I++++P L +L  ++  F +  P        +A+F IF + +W +  +    + 
Sbjct: 137 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SALFVIFITSIWPIIINTAVGVR 188

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+R  RL+  + F  + VP + P +   + + +   W  +VA+EM+  G   
Sbjct: 189 NIPQDYRNVARILRLNPLEFFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 246

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259
               GIG +I  A     L  I+ A L  +GV  F  D+L+
Sbjct: 247 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 282



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 13/201 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD+  + W   I++ RV +   +A+++ + +G  +G        + P  Q+L   P   +
Sbjct: 94  QDI-GLAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            PL  S  ++   +P+   +L +IF T  W I+ N   G    P D++ VA    +    
Sbjct: 153 LPL--SLAAFRDSSPS---ALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPLE 207

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  I++P   PY  TG     G +W A + +E+ + G       G+G +I ++      
Sbjct: 208 FFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 261

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
           P++++ +  +      L+R +
Sbjct: 262 PDIIVALAYIGVTGFCLDRLV 282


>gi|17230827|ref|NP_487375.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120]
 gi|17132430|dbj|BAB75034.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120]
          Length = 273

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           WL   ++ RVVV  ++A+ I IP+G  I         I P  QLL       + PL  + 
Sbjct: 80  WLILASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAV 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L PN     ++     W I+ N   G    P D++ V+    ++    +  I+LP
Sbjct: 140 ----FLKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKILLP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY  TG   A G +W A + +E+       L   G+G +I ++    +  E++L ++
Sbjct: 196 ATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAIV 249

Query: 561 IMCCFVLALNRFL 573
            +    L L++ +
Sbjct: 250 YLGAVGLVLDKIM 262



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L      F+   P        +AIF I  + +W +  +    +  +
Sbjct: 119 PLIQLLRPVAPLAWLPLAQAVFLKPNP--------SAIFVICITAIWPIILNTALGVKLV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   VS+   LS  + F+ + +P ++P +   + +++   W  VVA+EM++  D    
Sbjct: 171 PKDYRNVSKLLGLSPLENFYKILLPATLPYIFTGLRIAIGLSWLAVVAAEMLLSDD---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  A    ++  ++ A++ +  V  + D+++
Sbjct: 227 --GIGFFIVDAYNNANIHEMILAIVYLGAVGLVLDKIM 262


>gi|269967484|ref|ZP_06181541.1| putative nitrate transporter [Vibrio alginolyticus 40B]
 gi|269827925|gb|EEZ82202.1| putative nitrate transporter [Vibrio alginolyticus 40B]
          Length = 321

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|86605595|ref|YP_474358.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86554137|gb|ABC99095.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 275

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +    A+++ I +GI +G    I+  + P  Q L      +  PL    +S   
Sbjct: 87  SLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFL-----RMVAPLAWVPISLAA 141

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              N   +L +IF T  W IL N   G    P D+  V+    ++   ++  ++LP + P
Sbjct: 142 SQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSVLP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A I +E+   G       G+G +I ++ ++    E+++ V+ +  
Sbjct: 202 YMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGA 256

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 257 VGLLLDRLV 265



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 5/125 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AA+F IF + +W +  +    +  IP D   VS+  +LS    F+ + +P  +P +  
Sbjct: 146 EPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSVLPYMFT 205

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +   W  ++A+E+++ G     +PGIG +I  A ++  +  I+ A++ +  V  L
Sbjct: 206 GLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGAVGLL 260

Query: 255 YDQLL 259
            D+L+
Sbjct: 261 LDRLV 265


>gi|254506550|ref|ZP_05118691.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Vibrio parahaemolyticus 16]
 gi|219550423|gb|EED27407.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Vibrio parahaemolyticus 16]
          Length = 289

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 91  LLATVIAIPLGIILGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSAIYVSDDPMFAK 150

Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S     L +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 151 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 210

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 211 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 248



 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 164 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 224 LIAAEMLAQN------PGLGKFV 240


>gi|26986952|ref|NP_742377.1| nitrate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
 gi|24981564|gb|AAN65841.1|AE016212_7 nitrate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 260

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 32/238 (13%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ--SIGYIVNHFTYQDVLYVIWLGCITMF 388
           F Q+ +N ++   L  F +       +  AWQ  +   ++ H           LG  ++ 
Sbjct: 21  FWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAH-----------LGS-SLA 68

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV      A+++ + +G+ IG        + P  ++L   PA  + PL +       + P
Sbjct: 69  RVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAI------LMFP 122

Query: 449 NLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIFP 504
           +  LS++ I   G  + IL N + G  A   D + VAS+  +   RW   R ++LPG  P
Sbjct: 123 SSELSMVFITFTGALFPILLNTVHGVEAV--DPRLVASARSLGAGRWAILREVVLPGALP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             VTG     G +W   + +E+ S G       G+G Y  ES    ++P++V+G+L++
Sbjct: 181 SIVTGLAIGMGTSWFCLVTAEMIS-GQF-----GIGYYTWESYTLQNYPDIVVGMLLI 232



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 8/169 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ ++D     L   +L  +   +  R+ +    + L       L  +S+     L+P L
Sbjct: 43  PKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPL 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++++ IP + ++   ++ F +        +EL+ +F  FT  ++ +  +    +  +   
Sbjct: 103 EVLRPIPAVAWIPLAILMFPS--------SELSMVFITFTGALFPILLNTVHGVEAVDPR 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           L   +RS     W     + +P ++P +V  + + M   WF +V +EMI
Sbjct: 155 LVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMI 203


>gi|89092993|ref|ZP_01165944.1| putative nitrate transporter [Oceanospirillum sp. MED92]
 gi|89082643|gb|EAR61864.1| putative nitrate transporter [Oceanospirillum sp. MED92]
          Length = 328

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443
           ++  V+   ++AS+I IP GI IG    + S   P  QL        + PLV   VS  Y
Sbjct: 121 SLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKPVSPLAWLPLVTMVVSAVY 180

Query: 444 YHLNPNLWLSLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +P    S +    T      W  L N   G S    D + V+    ++       I+
Sbjct: 181 VSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIV 240

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   + G AW   I +E+ +      +  GLG ++ +  + GS     LG
Sbjct: 241 LPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LG 292

Query: 559 VLIMCCFVLALNRFL 573
            +++   V+ L  FL
Sbjct: 293 RIMVAVLVIGLIGFL 307



 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    +  I +DL+ VS+  RLS       + +P S+P +   + +S+   W  
Sbjct: 203 LWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIVLPSSIPMIFTGLRLSLGIAWMV 262

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           ++A+EM+         PG+G ++    +     ++   M+ +L VI L   LL R M++ 
Sbjct: 263 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLGRIMVAVL-VIGLIGFLLDRVMLLI 315

Query: 267 SNKFRLERTT 276
             K   ++T 
Sbjct: 316 QKKVSWDKTA 325


>gi|156976813|ref|YP_001447719.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116]
 gi|156528407|gb|ABU73492.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116]
          Length = 321

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|146339772|ref|YP_001204820.1| putative nitrate ABC transporter permease (ntrB-like protein)
           [Bradyrhizobium sp. ORS278]
 gi|146192578|emb|CAL76583.1| putative nitrate ABC transporter (permease protein) (ntrB-like
           protein) [Bradyrhizobium sp. ORS278]
          Length = 279

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 12/186 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++  +IA  I IP+G  IG  P +S  + PF Q+L       + PL +  +    L+ 
Sbjct: 94  RVMLGYLIAVAIAIPLGFLIGMSPLMSKALDPFIQILKPISPLAWMPLALYTIKDSSLS- 152

Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               ++ +IF  + W +L N   G ++   ++  VA +  +  +R    +ILP   P  +
Sbjct: 153 ----AIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTIL 208

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++    +
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGVVGM 262

Query: 568 ALNRFL 573
            L++ L
Sbjct: 263 VLDQLL 268



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   VW M  +    + ++ ++   V+R+  +  +++ + + +P + P ++
Sbjct: 149 SSLSAIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ A+L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGM 262

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 263 VLDQLLAR 270


>gi|28900912|ref|NP_800567.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809358|dbj|BAC62400.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633]
          Length = 307

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 109 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 168

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 169 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 228

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 229 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 266



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 182 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 241

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 242 LIAAEMLAQN------PGLGKFV 258


>gi|330448062|ref|ZP_08311710.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492253|dbj|GAA06207.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 324

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452
           ++AS+I IP+G+ +G    +     P  QLL       + PLV  V   SY   +P +  
Sbjct: 126 LLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASYVSDDPLVAK 185

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L     +   + W  L N   G +    D   V+    ++ W+  + I+LP   P   
Sbjct: 186 SFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIVLPSAIPMIF 245

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 283



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149
           + +L M   P++ +++ +  L +L    +     Y      V  + L ++F +    +W 
Sbjct: 142 NHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASYVSDDPLVAKSFLNSMFTVTLCSLWP 201

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    + N+ +DL  VSR  RLS WQ    + +P ++P +   + +S+   W  ++A
Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261

Query: 210 SEMIVVGDTVIPLPGIGSYI 229
           +EM+         PG+G ++
Sbjct: 262 AEMLAQN------PGLGKFV 275


>gi|239630003|ref|ZP_04673034.1| ABC-type proline/glycine betaine transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527615|gb|EEQ66616.1| ABC-type proline/glycine betaine transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 293

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+ +  V+ P++D MQ++P   +L   V +F +
Sbjct: 108 TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 167

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  +GWQ+   +
Sbjct: 168 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 217

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 218 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 264



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434
           T+  V+   ++A +I +P+GIW      +S+ ++P   F Q + AF    PA  FF    
Sbjct: 110 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 169

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P VV+ V  + + P + ++ L               G +  P D  E A +F  TGW+ 
Sbjct: 170 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 213

Query: 494 WRYIILP 500
              + LP
Sbjct: 214 LLKVQLP 220


>gi|301067141|ref|YP_003789164.1| putative glycine/betaine/carnitine ABC transporter
           membrane-spanning subunit [Lactobacillus casei str.
           Zhang]
 gi|300439548|gb|ADK19314.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus casei str.
           Zhang]
          Length = 283

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+    V+ P++D MQ++P   +L   V +F +
Sbjct: 98  TQTLTLVLTASLLAIVIGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  +GWQ+   +
Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 28/127 (22%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434
           T+  V+   ++A +I +P+GIW       S+ ++P   F Q + AF    PA  FF    
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P VV+ V  + + P + ++ L               G +  P D  E A +F  TGW+ 
Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203

Query: 494 WRYIILP 500
              + LP
Sbjct: 204 LLKVQLP 210


>gi|260366125|ref|ZP_05778585.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus K5030]
 gi|260879767|ref|ZP_05892122.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260896812|ref|ZP_05905308.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus Peru-466]
 gi|260902977|ref|ZP_05911372.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AQ4037]
 gi|308087350|gb|EFO37045.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus Peru-466]
 gi|308092367|gb|EFO42062.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308108312|gb|EFO45852.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AQ4037]
 gi|308114769|gb|EFO52309.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus K5030]
 gi|328470814|gb|EGF41725.1| nitrate ABC transporter permease protein [Vibrio parahaemolyticus
           10329]
          Length = 321

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|91224555|ref|ZP_01259816.1| putative nitrate transporter [Vibrio alginolyticus 12G01]
 gi|91190443|gb|EAS76711.1| putative nitrate transporter [Vibrio alginolyticus 12G01]
          Length = 321

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|262396901|ref|YP_003288754.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25]
 gi|262340495|gb|ACY54289.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 321

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 256 LIAAEMLAQN------PGLGKFV 272


>gi|153837223|ref|ZP_01989890.1| nitrate transporter system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|149749486|gb|EDM60240.1| nitrate transporter system, permease component [Vibrio
           parahaemolyticus AQ3810]
          Length = 323

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A++I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 125 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 184

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 185 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 244

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 245 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 282



 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 198 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 257

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 258 LIAAEMLAQN------PGLGKFV 274


>gi|300918768|ref|ZP_07135339.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300414090|gb|EFJ97400.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 298

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RV+   I+A II +P+GI +G    I +  +PF       PA+ F PL++      
Sbjct: 107 MTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAGIG 166

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I   V     A   D  E A +   T     R +I+PG  
Sbjct: 167 EMQ-----KILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVIIPGAA 221

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I  S    +  +++ G++++ 
Sbjct: 222 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGIIVIG 275

Query: 564 CFVL-------ALNR--FLWHPL 577
           C  L       A+NR  F+W  L
Sbjct: 276 CIGLLSDLLFKAVNRRLFVWSSL 298


>gi|239993923|ref|ZP_04714447.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii ATCC 27126]
          Length = 219

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V+V  +IAS++ +PVGI  G      + I P  QL        + PLV   VS  +
Sbjct: 12  SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71

Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   S   +           W  L N   G S    D   V+    +T +     I+
Sbjct: 72  VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +      L+R +
Sbjct: 186 MVAVLTIGAIGFVLDRLM 203



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +    +W    +    + NI +DL  VS+  RL+ +     + +P S+P +   + +S
Sbjct: 87  FTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIVLPSSIPMIFTGLRLS 146

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYD 256
           +  GW  ++A+EM+         PG+G ++    +    + L  I+ A+LT+  + F+ D
Sbjct: 147 LGIGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGAIGFVLD 200

Query: 257 QLLF 260
           +L+ 
Sbjct: 201 RLML 204


>gi|75907097|ref|YP_321393.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75700822|gb|ABA20498.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 283

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 363 SIGYIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++ YI+N F YQ     L + WL   ++ RV++  ++ +++ IP+G  IG        + 
Sbjct: 66  NLDYILNPF-YQRGPGNLGIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALN 124

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478
           P  Q+        + P+ ++   +   +P+   ++ +IF T  W  + N   G ++ P D
Sbjct: 125 PIIQIFKPVSPLAWLPIALAI--FNLADPS---AIFVIFITSLWPTIINTALGVASVPKD 179

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           + +VA    +  WR    II P   PY  TG   + G AW   +  E+ + G       G
Sbjct: 180 YLDVARVLEMPRWRRITKIIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IG 233

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +G ++ +   + +   V L V I+    L L+
Sbjct: 234 IGFFVWDEWSRLNLSSVFLAVFIIGLTGLILD 265



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   ++  +       L   SR   + L PI+ I + +  L +L   +  F NL    
Sbjct: 94  RVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPIALAIF-NL---- 148

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A+ +AIF IF + +W    +    + ++P+D  +V+R   +  W++   +  P S+P
Sbjct: 149 ---ADPSAIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRRITKIIWPASLP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   + +S+   W  +VA EM+  G
Sbjct: 206 YIFTGLRISLGIAWLVIVAVEMLTGG 231


>gi|288962947|ref|YP_003453241.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288915213|dbj|BAI76697.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 360

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449
           ++ +++ +P+G+  G  P +++ I P  Q+        + PLV   VS      +     
Sbjct: 165 LLGALVAVPLGVASGLSPTVNAAINPLIQIFKPVSPLAWLPLVTMVVSATVSGGDPLFEK 224

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L  ++ +   + W  L N   G S+   D   V     ++G+   R ++LP   PY  
Sbjct: 225 SFLTSAITVTLCSLWPTLINTAVGVSSIDRDLMNVGKVLQLSGFTMVRRLVLPSALPYIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNS--LAKIMVAVFTI 336

Query: 568 ALNRFL 573
            L  FL
Sbjct: 337 GLIGFL 342



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I RDL  V +  +LSG+     L +P ++P +   + +S+  GW  
Sbjct: 238 LWPTLINTAVGVSSIDRDLMNVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D+++ 
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVML 348


>gi|260777511|ref|ZP_05886405.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260607177|gb|EEX33451.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 322

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V    ++A+++ IP+GI +G    +     P  QLL       + P+V   VS  +
Sbjct: 115 SLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   +       L +   + W  L N   G ++   D   V+    ++ W+  R I+
Sbjct: 175 VSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 234

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           LP   P   TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 256

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 257 LIAAEMLAQN------PGLGKFV 273


>gi|307130415|ref|YP_003882431.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306527944|gb|ADM97874.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 528

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 16/195 (8%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            PR++V  +   L    L    S +  R L+   +     ++   L  + R    +L P+
Sbjct: 313 APREVVTALLAGLSSGELTSALSASLSRTLAGFALGAALGYLLGGLLGRHRVADRLLTPL 372

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L  ++SI +  +L     +F      KV+   LAA F            + YQ + ++P 
Sbjct: 373 LSALRSIALFAWLPLLTAWFGLEESAKVVFIALAAFFPAL--------LASYQGVRHLPP 424

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E +R  RLS  Q+  +L +P  +P L   + +S+   W   + +E  +         
Sbjct: 425 SLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYFIASGN----- 479

Query: 224 GIGSYIALAIKEQDL 238
           GIGS +   I+ Q L
Sbjct: 480 GIGSMM---IRAQQL 491


>gi|289208148|ref|YP_003460214.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
 gi|288943779|gb|ADC71478.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
          Length = 281

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 10/158 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV++   +A++I IP G  IG  P ++    PF Q+L       + PL +  +    
Sbjct: 93  SIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLALFVIR--- 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            + N+    ++   + W +L N   G ++  ND+  VA +  ++  R    +ILP   P 
Sbjct: 150 -DSNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVILPAAAPT 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +TG   + G AW   + +E+   G      TG+G YI
Sbjct: 209 ILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYI 240



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++AIF IF   +W M  +    + ++  D   V+++  LS  +  + + +P + P ++
Sbjct: 151 SNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVILPAAAPTIL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI- 252
             M +S+   W  +VA+EM+V G       GIG YI       DL ++++A++ M+G+I 
Sbjct: 211 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYIWNQWNNLDLASVIFAIV-MIGIIG 263

Query: 253 FLYD 256
           FL D
Sbjct: 264 FLLD 267


>gi|304397785|ref|ZP_07379661.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304354496|gb|EFM18867.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 275

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A++I IPVGI +G  P     + P  +L    P   + PL+V     
Sbjct: 81  AASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L +S L IF     +  + +AG           A S     W+  R++ILPG  
Sbjct: 141 GETSKILLIS-LAIFAP---VTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG ++ +S  +    +VVL  + + 
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVI 249

Query: 564 CFV 566
            F+
Sbjct: 250 AFI 252



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  RML A+  + +       L   S     +L P++++ + IP L +L   V++
Sbjct: 78  QHLAASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K++   LA IFA        +T S    + N  +     +RS   + WQ   +
Sbjct: 138 FGIGETSKILLISLA-IFA-------PVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRW 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P ++P ++  + + +  GW  +VA+E+I  
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIAA 222


>gi|315498257|ref|YP_004087061.1| nitrate abc transporter, inner membrane subunit [Asticcacaulis
           excentricus CB 48]
 gi|315416269|gb|ADU12910.1| nitrate ABC transporter, inner membrane subunit [Asticcacaulis
           excentricus CB 48]
          Length = 302

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++++P L +L  ++       P        +A+F IF + +W +  +    + NI
Sbjct: 145 PIIQVLRTVPPLAWLPISLAALREAQP--------SALFVIFITSIWPIVINTMVGVRNI 196

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+R  RL+  + F+ + +P + P +   + + +   W  +VASEM++ G     
Sbjct: 197 PQDYVNVARVLRLTPGEYFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV---- 252

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I        +  I+ A++ +  V F+ D+L+
Sbjct: 253 --GIGFFIWDQYNSSRMSDIIVALVWVGLVGFVLDRLV 288



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A++  + +G ++G          P  Q+L   P   + P  +S 
Sbjct: 106 WHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAWLP--ISL 163

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +     P+   +L +IF T  W I+ N + G    P D+  VA    +T   ++  I+L
Sbjct: 164 AALREAQPS---ALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLTPGEYFFKIML 220

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P+  TG     G +W A + SE+   G       G+G +I +        ++++ +
Sbjct: 221 PAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGIGFFIWDQYNSSRMSDIIVAL 274

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 275 VWVGLVGFVLDRLV 288


>gi|281355617|ref|ZP_06242111.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281318497|gb|EFB02517.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 297

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A +  IP GI +G    + +  +PF+++L A P  V+ P  ++ +  +        S+ 
Sbjct: 114 LALVTAIPAGIAVGSSRRLRAAAEPFSRVLGAIPPIVYIPYAIALLPSFRSA-----SIF 168

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +I+ G  W +  N ++G    P+   + A   H+    ++  I+LPG  P  +TGA  + 
Sbjct: 169 VIWSGAFWPVFVNTVSGVVTIPDSLLDSARMLHLKRSVFFFRILLPGAMPSILTGA--SL 226

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G  ++  +++     G     T GLG Y+   ++   +  V++G+L +   V +L
Sbjct: 227 GLIFSFLLLTAAELIGA----TEGLGWYVKNFSDFADYGRVIVGILFIGIVVTSL 277


>gi|146339483|ref|YP_001204531.1| nitrate transport permease (nrtB) [Bradyrhizobium sp. ORS278]
 gi|146192289|emb|CAL76294.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp.
           ORS278]
          Length = 289

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L  ++  F +  P        +AIF IF + VW +  +    + 
Sbjct: 130 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSVWPIIINTAVGIR 181

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   +L+  + F  + +P + P +   + + +   W  +VA+EM++ G   
Sbjct: 182 NIPQDYRNVAAVVQLNPLEFFVKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 239

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A+  +  + F+ D+L+
Sbjct: 240 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRLI 275



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   IA+++ + +G  IG        + P  Q+L   P   + PL  S  ++  
Sbjct: 98  SLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 155

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I++P   P
Sbjct: 156 GQPS---AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIMIPAAAP 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E++L +  +  
Sbjct: 213 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGI 266

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 267 IGFVLDRLI 275


>gi|295689454|ref|YP_003593147.1| nitrate ABC transporter inner membrane subunit [Caulobacter segnis
           ATCC 21756]
 gi|295431357|gb|ADG10529.1| nitrate ABC transporter, inner membrane subunit [Caulobacter segnis
           ATCC 21756]
          Length = 292

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F    P        +A+F IF + +W +  +    + 
Sbjct: 133 LDPIFQVLRTVPPLAWLPISLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVR 184

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           NIP D   V+R  RLS  + F+ + +P + P +   + + +   W  +VASEM++ G
Sbjct: 185 NIPSDYVNVARVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGG 241



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   I+++  I +G+++G        + P  Q+L   P   + P  +S  +++ 
Sbjct: 101 SLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLP--ISLAAFHQ 158

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   +L +IF T  W I+ N   G    P+D+  VA    ++   ++  I+LP   P
Sbjct: 159 AQPS---ALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVEYFFKILLPATTP 215

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG     G +W A + SE+
Sbjct: 216 YIFTGLRIGIGMSWLAIVASEM 237


>gi|50084690|ref|YP_046200.1| ABC transporter permease [Acinetobacter sp. ADP1]
 gi|49530666|emb|CAG68378.1| putative permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 262

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            +  +L A S+ L  ++ P+ + ++ +P+LG      ++F N         E A IF I 
Sbjct: 88  LILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  + +  + YQ L +     +E++R ++ S W+KF  + +P ++P ++  + +++   
Sbjct: 140 LASFFPLVINTYQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAIPFT 199

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGVIFLYD-QLLF 260
           W    ASE++          G+G+ +  A    E D+L +    +T+ G        L+ 
Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGAFMTASIHLIS 254

Query: 261 RPMIVW 266
           + +++W
Sbjct: 255 KRLLLW 260


>gi|154246559|ref|YP_001417517.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160644|gb|ABS67860.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
          Length = 279

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++A ++ +P+G  IG  P     + PF Q+L       + PL     + Y 
Sbjct: 91  SIGRVALGYVLAVLVAVPIGFLIGMSPLAYRALDPFIQVLKPISPLAWMPL-----ALYT 145

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +   ++ +IF  + W +L N   G  A   ++  VA +  +  WR    +ILP   P
Sbjct: 146 IKDSALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGPWRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++G+L +  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIANVIVGILFIGV 259

Query: 565 FVLALNRFL 573
             + L+  L
Sbjct: 260 VGMVLDLIL 268



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 47/86 (54%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   VW M  +    +  + ++   V+R+  +  W++ + + +P + P ++
Sbjct: 149 SALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGPWRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTV 219
             M +S+   W  +VA+EM+V G  +
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGTGI 234


>gi|330501505|ref|YP_004378374.1| putative nitrate transport system permease [Pseudomonas mendocina
           NK-01]
 gi|328915791|gb|AEB56622.1| possible nitrate transport system permease protein [Pseudomonas
           mendocina NK-01]
          Length = 278

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ +AIF IF   VW M  +    +  + RD   V+R+  LS  +  + + VP +MP ++
Sbjct: 148 SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMPTIL 207

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG Y+       +L ++++++L M+GV+ 
Sbjct: 208 TGMRISVGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLNLASVIFSIL-MIGVVG 260

Query: 254 LYDQLLF 260
           +   LL 
Sbjct: 261 MLLDLLL 267



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IP+G  IG  P +   + PF Q+L       + PL +  +    
Sbjct: 90  SLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  ++  R    +I+P   P
Sbjct: 150 TS-----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMP 204

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G Y+       +   V+  +L++  
Sbjct: 205 TILTGMRISVGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIGV 258

Query: 565 FVLALNRFL 573
             + L+  L
Sbjct: 259 VGMLLDLLL 267


>gi|254441535|ref|ZP_05055028.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 307]
 gi|198251613|gb|EDY75928.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 307]
          Length = 276

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    +  +  D   V+R+  LS ++  + + +P + P +V
Sbjct: 146 SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVILPAAAPTIV 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI- 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+GV+ 
Sbjct: 206 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGVVG 258

Query: 253 FLYDQLL 259
            L D  L
Sbjct: 259 MLLDSAL 265



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+    +A++I IP+G  IG        + PF Q+L       + PL +  +    
Sbjct: 88  SIYRVLTGYFMAALIAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFVIQDSE 147

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  ++ ++    +ILP   P
Sbjct: 148 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVILPAAAP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             VTG   + G AW   + +E+   G      TG+G Y+           V+  +L++  
Sbjct: 203 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLTSVIFSILMIGV 256

Query: 565 FVLALNRFL 573
             + L+  L
Sbjct: 257 VGMLLDSAL 265


>gi|166032562|ref|ZP_02235391.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC
           27755]
 gi|166026919|gb|EDR45676.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC
           27755]
          Length = 220

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +YV+    ITM RV+   + A II +P+G+ +G+ P I   + PF   L   P   + PL
Sbjct: 79  MYVLRNLGITMRRVMTGALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVPIMAWVPL 138

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +         P ++   L+ F   + I+ N I+G      DF   A S         + 
Sbjct: 139 AIVWFGIGD-GPTIF---LIAFSGVFTIILNTISGVQDISKDFYNAARSMGANTLNIIKD 194

Query: 497 IILPGIFPYYVTGAITACGGAW 518
           I+LPG  P  +TG   A G  W
Sbjct: 195 IVLPGSLPGVMTGVRLAIGLGW 216


>gi|148254269|ref|YP_001238854.1| nitrate transport permease NrtB [Bradyrhizobium sp. BTAi1]
 gi|146406442|gb|ABQ34948.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp.
           BTAi1]
          Length = 304

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L  ++  F +  P        +AIF IF + VW +  +    + 
Sbjct: 145 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSVWPIIINTAVGIR 196

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   +L+  + F  + +P + P +   + + +   W  +VA+EM++ G   
Sbjct: 197 NIPQDYRNVAAVVQLNPLEFFAKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 254

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A+  +  + F+ D+L+
Sbjct: 255 ----GIGFFIWDAWNSSHISEIVLALFYVGIIGFVLDRLI 290



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   IA+I+ + VG  IG        + P  Q+L   P   + PL  S  ++  
Sbjct: 113 SLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 170

Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I++P   P
Sbjct: 171 GQPS---AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIMIPAAAP 227

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G +W A + +E+   G       G+G +I ++       E+VL +  +  
Sbjct: 228 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIVLALFYVGI 281

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 282 IGFVLDRLI 290


>gi|282921823|ref|ZP_06329522.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9765]
 gi|282593877|gb|EFB98867.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9765]
          Length = 253

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+       ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 GSLS----AIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|323700263|ref|ZP_08112175.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323460195|gb|EGB16060.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 257

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 25/188 (13%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQV 147
           L A SRR   ++ P+++  + +P++  +  T++YF         G   A  FAI F    
Sbjct: 87  LIATSRRASHMVAPVMEFARYLPVVALVPLTLLYF---------GIGDAQKFAIIFLGTF 137

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           + +   +  S+  +P DL   + +   +  Q +  +  P ++PG++ ++ +++   W ++
Sbjct: 138 FQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPGIMDDLRITVGWAWTYL 197

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI--LYAMLTMLGVIFLYDQLLF----R 261
           V +E++          G+G  I   ++ Q  LAI  ++A L ++GV+ L    LF    R
Sbjct: 198 VVAELVAANS------GLGYMI---LRAQRFLAIDRIFAGLIIIGVLGLLTDYLFKLLTR 248

Query: 262 PMIVWSNK 269
            +  WS K
Sbjct: 249 IITPWSEK 256



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 10/182 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+V   +A++I +P+G+ I      S  + P  +     P     PL    + Y+ 
Sbjct: 66  SVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPL---TLLYFG 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +      +++ + GT + ++  V    +  P D    A++      + +R ++ PG  P 
Sbjct: 123 IGDAQKFAIIFL-GTFFQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPG 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +       G AW   +V+E+ +        +GLG  I  +    +   +  G++I+   
Sbjct: 182 IMDDLRITVGWAWTYLVVAELVA------ANSGLGYMILRAQRFLAIDRIFAGLIIIGVL 235

Query: 566 VL 567
            L
Sbjct: 236 GL 237


>gi|254418147|ref|ZP_05031871.1| ABC transporter, permease protein [Brevundimonas sp. BAL3]
 gi|196184324|gb|EDX79300.1| ABC transporter, permease protein [Brevundimonas sp. BAL3]
          Length = 365

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 15/229 (6%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+     G  V  F Y      I     ++F V     +A+++ +P+G+  G     ++ 
Sbjct: 133 GLEAAGRGGEVRDFRYAGSPSFIDQIFTSLFTVAFGFGLATVVAVPLGLVCGLSKGFNAA 192

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVIA 470
             P  Q+        + P+V   VS     P+  L       +++++  + W  L N   
Sbjct: 193 FNPLVQIFKPISPLAWLPIVTMVVSATMTRPDPALPKSFVISAVVVMLCSLWPTLINTAV 252

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA++   D   V     ++ +   R +ILP   PY  TG   + G  W   I +E+ +  
Sbjct: 253 GAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWMVLIAAEMLA-- 310

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
               +  GLG ++ +  + GS  E  L  ++    V+ L  FL   L +
Sbjct: 311 ----QNPGLGKFVWDEFQNGS--EQSLARIMFAVIVIGLIGFLLDRLMM 353



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +      +I RDL  V R  RLS + +   L +P ++P +   M +S+  GW 
Sbjct: 242 SLWPTLINTAVGAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWM 301

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLAILYAMLTMLGVIFLYDQLLF 260
            ++A+EM+         PG+G ++    +   EQ L  I++A++ +  + FL D+L+ 
Sbjct: 302 VLIAAEMLAQN------PGLGKFVWDEFQNGSEQSLARIMFAVIVIGLIGFLLDRLMM 353


>gi|82749885|ref|YP_415626.1| ABC transporter permease [Staphylococcus aureus RF122]
 gi|82655416|emb|CAI79802.1| probable ABC transporter permease [Staphylococcus aureus RF122]
          Length = 253

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   I+A ++ IP+G  +G    + + I+P  QL+       + P VV    +
Sbjct: 61  AISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVL---W 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 118 FGID-SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|270261496|ref|ZP_06189769.1| transporter [Serratia odorifera 4Rx13]
 gi|270044980|gb|EFA18071.1| transporter [Serratia odorifera 4Rx13]
          Length = 287

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 12/181 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+FRV+   ++A+ I +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 95  MTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEAFLEPFVSFCRYLPASAFVPLLILWAGIG 154

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I+  V     A   D  E A +   +     R +++PG  
Sbjct: 155 EMQ-----KILVIFIGSFFQIVLMVAVTVGAARRDLVEAAYTLGASNRSVVRRVLIPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 210 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVDSQALLNTGQIIFGIIVIG 263

Query: 564 C 564
           C
Sbjct: 264 C 264


>gi|27377915|ref|NP_769444.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27351061|dbj|BAC48069.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 298

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  ++++IP L +L  ++  F +  P        +AIF IF + +W +  +    + 
Sbjct: 139 LDPLFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 190

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   +L+  + F  + +P + P +   + + +   W  +VA+EM++ G   
Sbjct: 191 NIPQDYRNVAAVVQLNPLEFFGKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 248

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A++ +  V F+ D+L+
Sbjct: 249 ----GIGFFIWDAWNSSHISEIILALIYVGIVGFVLDRLI 284



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +++I  I +G+ +G        + P  Q+L   P   + PL  S 
Sbjct: 102 WHLSASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGLDPLFQVLRTIPPLAWLPL--SL 159

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I++
Sbjct: 160 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFGKIMI 216

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L +
Sbjct: 217 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILAL 270

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 271 IYVGIVGFVLDRLI 284


>gi|299134441|ref|ZP_07027634.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298591188|gb|EFI51390.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 257

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 10/174 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV +  +++++I +P+G+ IG+       I P  ++L   PA  + PL +         P
Sbjct: 63  RVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFKSSE-GP 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            ++L+ L  F   +    N + G  +    +   A     + W+ +R+I++PG  P+  T
Sbjct: 122 VIFLTFLPAF---FATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSLPFVFT 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G   + G AW + +  E+ +  +      GLG  I  S    S+P +V+G++ +
Sbjct: 179 GLEISIGLAWFSLVAGEMIAGEY------GLGYVIYTSYTMVSYPTIVIGMITL 226



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  A V+S +       +   SR     + P+L++++ IP L ++   ++ F +     
Sbjct: 63  RVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFKS----- 117

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +E   IF  F    +  T +    + +I       +     S WQ F ++ VP S+P
Sbjct: 118 ---SEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSLP 174

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   + +S+   WF +VA EMI
Sbjct: 175 FVFTGLEISIGLAWFSLVAGEMI 197


>gi|90021910|ref|YP_527737.1| 2-isopropylmalate synthase [Saccharophagus degradans 2-40]
 gi|89951510|gb|ABD81525.1| binding-protein-dependent transport systems inner membrane
           component [Saccharophagus degradans 2-40]
          Length = 337

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 19/202 (9%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLS 453
           ++A+I+ +P+GI+ G  P +SS   P  QL        + P+V   VS  Y  + + W +
Sbjct: 141 LLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPLAWLPIVTMIVSATYVTSDDSWFT 200

Query: 454 -------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +   + W  L N   G ++   D   V     +  +     ++LP   P  
Sbjct: 201 KSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPSSLPLI 260

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMC 563
            TG   + G  W   I +E+ S      +  GLG ++ +  + G   S  ++++ VL + 
Sbjct: 261 FTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFVWDEFQNGSSNSLSKIMVAVLTIG 314

Query: 564 CFVLALNR--FLWHPLYLYGTR 583
                L+R  F    L+ +G +
Sbjct: 315 VIGFLLDRVMFTLQNLFTFGEK 336



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  V +  +L  + K   L +P S+P +   + +S+  GW  
Sbjct: 215 LWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPSSLPLIFTGLRLSLGVGWMV 274

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+LT+  + FL D+++F
Sbjct: 275 LIAAEMLSQN------PGLGKFVWDEFQNGSSNSLSKIMVAVLTIGVIGFLLDRVMF 325


>gi|323463373|gb|ADX75526.1| ABC transporter, permease protein [Staphylococcus pseudintermedius
           ED99]
          Length = 254

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 10/187 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R +V  +IA ++ IP+GI +G    +   I+P  Q +       + P +V      
Sbjct: 62  ISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGI- 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +L    ++     + I+FN I G     N + ++A + ++ GW  +R II PG F 
Sbjct: 121 ---GSLPAIFIIFIAAFFPIIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFK 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + ++G   A G +W   +  E+          +GLG  I +S    +  +V+  +  +  
Sbjct: 178 HIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSSIFFIGI 231

Query: 565 FVLALNR 571
           F   ++R
Sbjct: 232 FGFLIDR 238


>gi|261250974|ref|ZP_05943548.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260937847|gb|EEX93835.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 322

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A+ I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 124 LLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 183

Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S     L +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIVLPSAIPMIF 243

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VSR  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 197 LWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 257 LIAAEMLAQN------PGLGKFV 273


>gi|56750321|ref|YP_171022.1| nitrate/nitrite ABC transporter permease [Synechococcus elongatus
           PCC 6301]
 gi|81300047|ref|YP_400255.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|585581|sp|P38044|NRTB_SYNE7 RecName: Full=Nitrate transport permease protein nrtB
 gi|48970|emb|CAA43810.1| nitrate transporter [Synechococcus elongatus PCC 7942]
 gi|56685280|dbj|BAD78502.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus elongatus PCC 6301]
 gi|81168928|gb|ABB57268.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|445046|prf||1908370A nitrate transporter
          Length = 279

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 15/193 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV +  ++A+   I VG  +G    +   + P  Q+L   P   +FP  +S + + 
Sbjct: 86  ISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFP--ISLMVFQ 143

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             N +   ++ +IF T  W I+ N   G +  P+D+  VA    ++   +   I++P   
Sbjct: 144 DANTS---AIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTV 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE---KGSFPEVVLGVL 560
           PY   G   A G AW A + +E+           G+G +I ++      GS  +++L + 
Sbjct: 201 PYVFAGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDGSSSQIILAIF 254

Query: 561 IMCCFVLALNRFL 573
            +    L+L+R +
Sbjct: 255 YVGLVGLSLDRLV 267



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+ LG  L P++ +++++P L +   +++ F +        A  +AIF IF + +W +  
Sbjct: 112 SKFLGKGLDPVIQVLRTVPPLAWFPISLMVFQD--------ANTSAIFVIFITAIWPIII 163

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP D   V+R  +LS       + +P ++P +   + +++   W  +VA+EM
Sbjct: 164 NTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVPYVFAGLRIAVGLAWLAIVAAEM 223

Query: 213 I 213
           +
Sbjct: 224 L 224


>gi|237808527|ref|YP_002892967.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
 gi|237500788|gb|ACQ93381.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
          Length = 312

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 13/175 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
             ++  V    ++AS+I IP+GI +G    +   + P  Q+L       + PLV   VS 
Sbjct: 103 TTSLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQILKPISPLAWLPLVTMVVSA 162

Query: 443 -YYHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            Y   NP +  S +     +   + W  L N   G +    D K V+    +      R 
Sbjct: 163 VYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDPDLKNVSRVLKLDPLTHVRK 222

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           I+LP   P   TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 223 IVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 271



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 12/168 (7%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P++ I++ I  L +L    +    +Y      V  + + + F +    +W    +   
Sbjct: 137 LNPVIQILKPISPLAWLPLVTMVVSAVYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTV 196

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + NI  DL+ VSR  +L        + +P ++P +   + +S+   W  ++A+EM+   
Sbjct: 197 GVANIDPDLKNVSRVLKLDPLTHVRKIVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLAQN 256

Query: 217 DTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLFR 261
                 PG+G ++    +    Q L  I+ A++T+  + F+ D+ + +
Sbjct: 257 ------PGLGKFVWDEFQNGSAQSLARIMVAVVTIGIIGFMLDRGMLQ 298


>gi|308183780|ref|YP_003927912.1| glycine/betaine/carnitine ABC transporter, membrane-spanning
           subunit [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308047706|gb|ADO00249.1| glycine/betaine/carnitine ABC transporter, membrane-spanning
           subunit [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 279

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           ++T   +LS+ +I+++         AKS R  +V+ PILD MQ++P   +L   V +F  
Sbjct: 93  TQTLTLVLSSSLIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFF-- 150

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G V G   + IFA  T     MT      +  +P DL EV+ SF  + WQK   L +
Sbjct: 151 -GIGMVPGVLASVIFA--TPPTVRMT---NLGIRQVPSDLIEVADSFGSTSWQKLIKLQL 204

Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           P +    M G+   MM+ +S          M+V+   +  L G+G+ +  A+   D
Sbjct: 205 PLAKTTIMSGINQTMMLGLS----------MVVIASMIGAL-GLGTQVYFAVGRND 249



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWL 452
           +IA ++ IP+GIW+         I+P    +   PA V+    +  VS++ +   P +  
Sbjct: 104 LIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYL---IPAVSFFGIGMVPGVLA 160

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           S+  IF T   +    + G    P+D  EVA SF  T W+    + LP
Sbjct: 161 SV--IFATPPTVRMTNL-GIRQVPSDLIEVADSFGSTSWQKLIKLQLP 205


>gi|109898731|ref|YP_661986.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
 gi|109701012|gb|ABG40932.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
          Length = 329

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V V  +IAS+I +P+GI  G      + I P  QLL       + PLV   VS  +
Sbjct: 122 SLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181

Query: 446 LNPNLWLSLLMIFGTQ-------WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   S   I           W  L N   G S+  +D   V+    +  +     I+
Sbjct: 182 ISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIV 241

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           +P   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +     AL+R +
Sbjct: 296 MVAVLTIGLIGFALDRLM 313



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I  DL  VS+  RL  +     + +P S+P +   + +S+  GW  
Sbjct: 204 LWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMV 263

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ--LLFR 261
           ++A+EM+         PG+G ++    +    + L  I+ A+LT+  + F  D+  LL +
Sbjct: 264 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLMLLLQ 317

Query: 262 PMIVWSN 268
             + W  
Sbjct: 318 KQVSWDK 324


>gi|163853891|ref|YP_001641934.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
 gi|163665496|gb|ABY32863.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
          Length = 285

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  I+++IP L +L  ++  F +  P        +AIF IF + 
Sbjct: 113 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 164

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D   V+   RL+  + F  + +P + P +   + + +   W  
Sbjct: 165 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 224

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  + F+ D+++
Sbjct: 225 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 271



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL  S 
Sbjct: 89  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 146

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I+L
Sbjct: 147 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 203

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ +
Sbjct: 204 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 257

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 258 VYVGLIGFVLDRMV 271


>gi|320160159|ref|YP_004173383.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319994012|dbj|BAJ62783.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 272

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 22/196 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           ++P++   T   ++  + +  +   V   L AKS  L  +L P L   Q+IP++      
Sbjct: 70  TIPRHFFATLQEVVPGLFLGSVSASVLGYLIAKSSLLERLLSPYLVASQAIPVVAIAPLL 129

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F      K++   L   F +  + V          L  +P+ L ++ RS R   WQ 
Sbjct: 130 IIWFGPGITSKILICALVVFFPVLVNTV--------VGLRAVPQSLHDLMRSLRAHPWQI 181

Query: 180 FWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WYL +P +MP    GL     +S+ G           VVG+ V    G+G  I +A  +
Sbjct: 182 VWYLEIPAAMPIFLGGLRVGATLSVIGA----------VVGEFVGADRGLGFLINVARGQ 231

Query: 236 QDLLAILYAMLTMLGV 251
            D   +  A+LT++G+
Sbjct: 232 YDHPLVFAAVLTLVGM 247


>gi|257062962|ref|YP_003142634.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256790615|gb|ACV21285.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 244

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++RVV+ ++I +++ IP+G+  G  P + +   P    L   P  V  P+ +  +   
Sbjct: 53  VSLYRVVIAMVIGTVLAIPLGLVCGRSPRVDAVFAPVLYFLYPLPKVVLLPVFIVLLGLA 112

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P + L  L IF   + +L  V     + P D      S   +    +R++I+P   P
Sbjct: 113 D-APKIALIALTIF---FQVLVTVRDATKSVPEDSVLSVRSLGASRLDIYRHVIVPATLP 168

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              T    + G A      +E  S+      +TGLG +IA++    ++P++  G++ M  
Sbjct: 169 ELFTAQRISSGTAVAILFFAE--SFAG----STGLGYFIADAWALLNYPKMFAGIIAMAV 222

Query: 565 F 565
            
Sbjct: 223 L 223


>gi|296120166|ref|ZP_06838719.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295966858|gb|EFG80130.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 260

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 18/179 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  L A VI+L   F+      +S  L   + P++ I++ +  L +L   +    + 
Sbjct: 76  RVLLGFLLAAVIALPVGFILG----RSTTLRWAVDPVVQILRPVSPLAWLPLGLALLKD- 130

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  AE  A+F I  S +W +  +   ++ ++      ++ +   + W +  Y+ +P
Sbjct: 131 -------AENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIYIWLP 183

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            S+PG++  + +S+S  W  +VA+EM++ G       G+G ++  A    D+ AI+ A+
Sbjct: 184 ASLPGIITGLRLSLSTAWLVIVAAEMLIGGR------GVGFFVWNAWNRLDIDAIVVAI 236



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 19/207 (9%)

Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV++  ++A++I +PVG  +G    +   + P  Q+L    
Sbjct: 57  YQDGPASVGIFWHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVS 116

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + PL ++ +     N  +++ LL      W IL N I    +    +  +A +    
Sbjct: 117 PLAWLPLGLALLKDAE-NTAVFVILL---SALWPILINTIDAVRSVNPTYINLADTI--- 169

Query: 490 GWRWWR---YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           G  WW    YI LP   P  +TG   +   AW   + +E+   G       G+G ++  +
Sbjct: 170 GTNWWSRIIYIWLPASLPGIITGLRLSLSTAWLVIVAAEMLIGGR------GVGFFVWNA 223

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +V+ + I+    L L+  +
Sbjct: 224 WNRLDIDAIVVAIFIIGIAGLVLDHLV 250


>gi|254295130|ref|YP_003061153.1| binding-protein-dependent transporters inner membrane component
           [Hirschia baltica ATCC 49814]
 gi|254043661|gb|ACT60456.1| binding-protein-dependent transport systems inner membrane
           component [Hirschia baltica ATCC 49814]
          Length = 370

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 15/188 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453
           I+A++I  P+GI +G  P +S+   P  Q+        + P+V   VS     + N+  S
Sbjct: 176 ILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATVATDGNMSKS 235

Query: 454 LL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L     +   + W  L N   G ++   D   V     +  W     ++LP   P   T
Sbjct: 236 FLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVLPSALPLIFT 295

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCF 565
           G   + G  W   I +E+ +      +  GLG ++ +  + G   S  ++++ VL +   
Sbjct: 296 GMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGII 349

Query: 566 VLALNRFL 573
              L+RF+
Sbjct: 350 GFILDRFM 357



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 19/194 (9%)

Query: 79  SLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNLYP 128
           ++ F F+ AT+ A         S  +     PI+ I + +  L +L     VV       
Sbjct: 170 TVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATVATD 229

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G +  + L +   +    +W    +    + +I +DL  V +  +L  W K   L +P +
Sbjct: 230 GNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVLPSA 289

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   M +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 290 LPLIFTGMRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAV 343

Query: 246 LTMLGVIFLYDQLL 259
           LT+  + F+ D+ +
Sbjct: 344 LTIGIIGFILDRFM 357


>gi|240141347|ref|YP_002965827.1| Nitrate transport permease protein [Methylobacterium extorquens
           AM1]
 gi|254563853|ref|YP_003070948.1| ni=trate transport permease [Methylobacterium extorquens DM4]
 gi|240011324|gb|ACS42550.1| Nitrate transport permease protein [Methylobacterium extorquens
           AM1]
 gi|254271131|emb|CAX27138.1| Nitrate transport permease protein [Methylobacterium extorquens
           DM4]
          Length = 286

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  I+++IP L +L  ++  F +  P        +AIF IF + 
Sbjct: 114 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D   V+   RL+  + F  + +P + P +   + + +   W  
Sbjct: 166 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  + F+ D+++
Sbjct: 226 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 272



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL  S 
Sbjct: 90  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 147

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I+L
Sbjct: 148 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 204

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ +
Sbjct: 205 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 258

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 259 VYVGLIGFVLDRMV 272


>gi|167761565|ref|ZP_02433692.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704]
 gi|167661231|gb|EDS05361.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704]
          Length = 219

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 5/152 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F+  D LYV+    ITM RV+   + A II  P+G+ +G+ P I   + PF   L   P 
Sbjct: 73  FSLTD-LYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVPI 131

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +         P ++   L+ F   + I+ N I+G      D+   A S   + 
Sbjct: 132 MAWVPLAIVWFGIGD-GPTIF---LIAFSGIFTIILNTISGVQDISKDYYHAARSMGAST 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +   + ++LPG  P  +TG   A G  W + I
Sbjct: 188 FGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 8/141 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L+  + + +  F    L   S ++   L P ++ ++ +PI+ ++   +V+F    
Sbjct: 87  TMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVPIMAWVPLAIVWFG--- 143

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +   IF I  S ++ +  +    + +I +D    +RS   S +     + +P 
Sbjct: 144 ----IG-DGPTIFLIAFSGIFTIILNTISGVQDISKDYYHAARSMGASTFGVIKDVVLPG 198

Query: 188 SMPGLVWNMMMSMSGGWFFVV 208
           S+PG++  + +++  GW  V+
Sbjct: 199 SLPGVLTGLRLAVGLGWMSVI 219


>gi|332306314|ref|YP_004434165.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173643|gb|AEE22897.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 329

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V V  +IAS+I +P+GI  G      + I P  QLL       + PLV   VS  +
Sbjct: 122 SLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181

Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   S   I           W  L N   G S+  +D   V+    +  +     I+
Sbjct: 182 VSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIV 241

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           +P   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +     AL+R +
Sbjct: 296 MVAVLTIGLIGFALDRLM 313



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I  DL  VS+  RL  +     + +P S+P +   + +S+  GW  
Sbjct: 204 LWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMV 263

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ--LLFR 261
           ++A+EM+         PG+G ++    +    + L  I+ A+LT+  + F  D+  LL +
Sbjct: 264 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLMLLLQ 317

Query: 262 PMIVWSN 268
             + W  
Sbjct: 318 KQVSWDK 324


>gi|218532835|ref|YP_002423651.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218525138|gb|ACK85723.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
          Length = 285

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            TL  +S      L PI  I+++IP L +L  ++  F +  P        +AIF IF + 
Sbjct: 113 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 164

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +    + NIP+D   V+   RL+  + F  + +P + P +   + + +   W  
Sbjct: 165 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 224

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA+EM++ G       GIG +I  A     +  I+ A++ +  + F+ D+++
Sbjct: 225 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 271



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL  S 
Sbjct: 89  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 146

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    P+   ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I+L
Sbjct: 147 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 203

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ +
Sbjct: 204 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 257

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 258 VYVGLIGFVLDRMV 271


>gi|298693438|gb|ADI96660.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED133]
 gi|323440153|gb|EGA97867.1| ABC transporter permease [Staphylococcus aureus O11]
 gi|323443616|gb|EGB01230.1| ABC transporter permease [Staphylococcus aureus O46]
          Length = 253

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLYLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|62183746|gb|AAX73264.1| transmembrane protein [Methanohalophilus portucalensis FDF-1]
          Length = 276

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 25/181 (13%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +Y+  T   ++S+  ++L+       LAAKS  L  +L PILD+MQ++P   +L   V++
Sbjct: 89  EYSMETIALVISSAALALIIGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIF 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F +   PG +     A +       +   T  + Q    +P++L EV+ +F  + WQK  
Sbjct: 149 FGLGNVPGMI-----ATVVFSMPPAIRLTTLGITQ----VPKELVEVADAFGSTSWQKLI 199

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +    M G+   +M+++S          M+V+  ++I   G+G  + + I+  D
Sbjct: 200 KVEIPVALKTIMAGVNQCIMLALS----------MVVIA-SMIGARGLGYQVLIGIQRVD 248

Query: 238 L 238
           +
Sbjct: 249 I 249


>gi|188580473|ref|YP_001923918.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343971|gb|ACB79383.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 273

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVVV  ++ + + +P+G+++G    I   I P  Q+L   P   + PL    + ++ 
Sbjct: 80  SLYRVVVGFLVGAGLALPLGLFMGTSDVIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A S   +    +R +ILP   PY
Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++GA    G A+   IV+E+ +         GLG  I E+ E     +++ G+L +   
Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 249

Query: 566 VLALN 570
            L ++
Sbjct: 250 GLIID 254


>gi|296446867|ref|ZP_06888804.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
 gi|296255638|gb|EFH02728.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
          Length = 247

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I  I++ IP L ++ F +++F           E AA+F I     W + FS + ++ N+ 
Sbjct: 93  ITRILRPIPGLAWIPFAILWFGV--------EEKAAVFIIAIGVFWIVYFSAHGAIRNVD 144

Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           RDL EV+ +F   + W+K   +  P S+PG++  +  S+   W  VVA+E+
Sbjct: 145 RDLVEVAAAFGFRTSWEKLVKVQFPASLPGILVGVRTSLGQAWMAVVAAEL 195


>gi|91777773|ref|YP_552981.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91690433|gb|ABE33631.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 269

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%)

Query: 327 FPENFLQLC-----SNQRVSYMLDIF---WFCVVCGVAI------GIAWQSIGYIVNHFT 372
           FP  F +L      + QR+S +L IF   W+     V        G  W ++  ++   T
Sbjct: 11  FPARFGRLTRFARVAGQRLS-LLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATGT 69

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + + L       IT++RVV   ++A+++  P+GI +G    + S  +P   ++    A +
Sbjct: 70  FAEDL------GITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAI 123

Query: 433 F--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +  F L+   +S      N     ++       IL NV  GA +   ++ E+A SF ++ 
Sbjct: 124 WAIFALIWFGIS------NGTTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSR 177

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    I LP + PY+ +GA  A G  W  S+V+E          + G+G  + ++ +  
Sbjct: 178 SKVMTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLV 231

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPL 577
              +V    L M   ++ L   +  PL
Sbjct: 232 QTDQVFAWTLTMVVLMVVLEYGILKPL 258


>gi|152981435|ref|YP_001354775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281512|gb|ABR89922.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 276

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 10/177 (5%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A+++ IP+G+ IG    I   + P  QLL   P   + PL    + ++ + PN  +  L+
Sbjct: 94  AALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPL---SMIFFGIGPNAAI-FLV 149

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + I+FN   G  A  N   E A      G   +R ++LP   P  + G     G 
Sbjct: 150 FLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSLFRQVVLPAAMPSILNGLRLGHGF 209

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           AW   +V E+           GLGA I +         V+ G++++     + +R L
Sbjct: 210 AWILIVVGEMTG------VPEGLGAVIMDGRMLSRTDLVIAGMVVIGIVGYSTDRIL 260



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +LP +  ++  R+      + L       L  + + +  +L P L +++ +P+  +L  
Sbjct: 74  ETLPLHLWKSVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPL 133

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F        IG   AAIF +F    + + F+    +  +   L E +     +G  
Sbjct: 134 SMIFFG-------IGPN-AAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSS 185

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            F  + +P +MP ++  + +     W  +V  EM
Sbjct: 186 LFRQVVLPAAMPSILNGLRLGHGFAWILIVVGEM 219


>gi|260768120|ref|ZP_05877054.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616150|gb|EEX41335.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 322

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 13/163 (7%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLS 453
           +AS+I IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    S
Sbjct: 125 LASLIAIPLGIVLGLNHGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAKS 184

Query: 454 LL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +     +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   T
Sbjct: 185 FVNSLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFT 244

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           G   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 245 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           ++F +    +W    +    + ++ +DL  VS+  RLS WQ    + +P ++P +   + 
Sbjct: 188 SLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFTGLR 247

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +S+   W  ++A+EM+         PG+G ++
Sbjct: 248 LSLGIAWMVLIAAEMLAQN------PGLGKFV 273


>gi|33415329|gb|AAQ18182.1| NasE [Rhodobacter capsulatus]
          Length = 289

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++++P L +L  ++  FM+  P        +AIF IF + +W +  +    +  I
Sbjct: 134 PLFQVLRTVPPLAWLPISLAAFMDSRP--------SAIFVIFITAIWPILINTAAGVRAI 185

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+   RL+  + F  + VP + P +   + + +   W  +VA+EM+  G     
Sbjct: 186 PQDYRNVAAVLRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGGV---- 241

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG +I  A     L  I  A+L +    F  D+L+
Sbjct: 242 --GIGFFIWDAWNSSMLTDIFVALLYIGATGFALDRLV 277



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476
           + P  Q+L   P   + P  +S  ++    P+   ++ +IF T  W IL N  AG  A P
Sbjct: 132 VDPLFQVLRTVPPLAWLP--ISLAAFMDSRPS---AIFVIFITAIWPILINTAAGVRAIP 186

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++ VA+   +    ++  I++P   PY  +G     G AW A + +E+ + G      
Sbjct: 187 QDYRNVAAVLRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGG------ 240

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G +I ++       ++ + +L +     AL+R +
Sbjct: 241 VGIGFFIWDAWNSSMLTDIFVALLYIGATGFALDRLV 277


>gi|330718294|ref|ZP_08312894.1| OpuABC protein [Leuconostoc fallax KCTC 3537]
          Length = 569

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A VISL+       LAAKS R   ++ PILD MQ++P   +L   V +F + + PG    
Sbjct: 102 ASVISLIIGVPLGILAAKSDRARAIIQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P DL E + SF  + WQK   L +P +    +
Sbjct: 158 -----VFASIIFALPPMVRMTNLGIRQVPTDLVEAADSFGSTPWQKLIKLELPTAKNTIL 212

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLAAVQHADV 250


>gi|119477165|ref|ZP_01617401.1| possible nitrate transport system permease protein [marine gamma
           proteobacterium HTCC2143]
 gi|119449528|gb|EAW30766.1| possible nitrate transport system permease protein [marine gamma
           proteobacterium HTCC2143]
          Length = 276

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    + N+  D   V+R+  LS  Q  + + +P + P ++
Sbjct: 146 SEQSAIFVIFICSIWPMLINTAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAPTIL 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G+I
Sbjct: 206 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFSIL-MIGII 257



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   + A+++ IP+G  IG  P +   + PF Q+L       + PL +  +    
Sbjct: 88  SLYRVITGFVAAALVAIPLGFVIGMSPLMHRALNPFIQVLRPISPLAWMPLALFVIRDSE 147

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +   +D+  VA +  ++  +    +ILP   P
Sbjct: 148 QS-----AIFVIFICSIWPMLINTAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +TG   + G AW   + +E+   G      TG+G Y+
Sbjct: 203 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 235


>gi|296161625|ref|ZP_06844429.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295888102|gb|EFG67916.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 269

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G  W ++  ++   T+ + L       IT++RVV   ++A+++  P+GI +G    + S 
Sbjct: 55  GKTWNALLDLIATGTFAEDL------GITLYRVVAGFLLAALVGTPLGILLGANRRLGSF 108

Query: 418 IQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            +P   ++    A ++  F L+   +S      N     ++       IL NV  GA + 
Sbjct: 109 CEPVLSVVNTVSAAIWAIFALIWFGIS------NGTTIFVVFMEAMPLILTNVWQGAQSV 162

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++ E+A SF ++  +    I LP + PY+ +GA  A G  W  S+V+E          
Sbjct: 163 NAEYVELARSFQMSRSKVMTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIG------S 216

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           + G+G  + ++ +     +V    L M   ++ L   +  PL
Sbjct: 217 SNGVGYRLRQAADLVQTDQVFAWTLTMVVLMVVLEYGILKPL 258


>gi|169338022|ref|ZP_02621223.2| glycine betaine transport system permease protein opuAB
           [Clostridium botulinum C str. Eklund]
 gi|169295381|gb|EDS77514.1| glycine betaine transport system permease protein opuAB
           [Clostridium botulinum C str. Eklund]
          Length = 277

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 29/171 (16%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           + VISLL       L  K R L  ++ P+LD MQ++P   +L   V++F           
Sbjct: 96  STVISLLIGIPIGILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFF----------- 144

Query: 135 ELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
            +  +  I ++ +++M  ++  +   L  +P++LEEV +SF  +  +  + + +P ++P 
Sbjct: 145 GIGNVPGIISTVIFSMPPAVRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPS 204

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              G+  ++MM++S          M+VV  ++I   G+GS +   I+  D+
Sbjct: 205 IMAGINQSIMMALS----------MVVVA-SMIGTRGLGSQVLSGIQRNDI 244


>gi|241661876|ref|YP_002980236.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii
           12D]
 gi|240863903|gb|ACS61564.1| nitrate ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 283

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A++I IP G  IG    +++   P   LL       + P  +  + +   NP    ++ 
Sbjct: 104 MAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKSANPAAIWAIF 161

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY +TG   + G
Sbjct: 162 IC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIG 219

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            AW   + +E+ + G       G+G ++ +         +V+ + ++    L L   L
Sbjct: 220 TAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEHAL 271


>gi|299770167|ref|YP_003732193.1| ABC transporter permease [Acinetobacter sp. DR1]
 gi|298700255|gb|ADI90820.1| ABC transporter permease [Acinetobacter sp. DR1]
          Length = 262

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 15/170 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            +  TL A S+ L  ++ P+ + ++ +P+LG      ++F N         E A IF I 
Sbjct: 88  LILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  + +  + +Q L +     +E++R ++ S W+KF  + +P ++P ++  + +++   
Sbjct: 140 LASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAVPFT 199

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGV 251
           W    ASE++          G+G+ +  A    E D+L +    +T+ G 
Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGA 244


>gi|294679156|ref|YP_003579766.1| glycine betaine/L-proline ABC transporter permease ProW-2
           [Rhodobacter capsulatus SB 1003]
 gi|294477972|gb|ADE87359.1| glycine betaine/L-proline ABC transporter, permease protein ProW-2
           [Rhodobacter capsulatus SB 1003]
          Length = 303

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 69  TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M+S   +++++        AA+S RL  ++ P+LD+MQ++P   +L   VV F    
Sbjct: 111 TLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSPVLDVMQTLPSFVYLIPVVVIF---G 167

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            GKV G     I+A     V  M       +  + R++ E + +F  S  QK W + +P 
Sbjct: 168 IGKVPGMIAVVIYA-----VPPMIRLTTLGIRLVDREVTEAAEAFGSSARQKLWNVQLPL 222

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           ++P    G+   +MMS+S     VV + M+ VG       G+G  +  AI  Q
Sbjct: 223 ALPTIMTGVNQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 264


>gi|148256707|ref|YP_001241292.1| putative nitrate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146408880|gb|ABQ37386.1| putative nitrate ABC transporter (permease protein) (ntrB-like
           protein) [Bradyrhizobium sp. BTAi1]
          Length = 279

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  +IA  I IP+G  IG  P +S  + PF Q++       + PL +  +    
Sbjct: 91  SLGRVMLGYLIAVAIAIPLGFLIGMSPLMSKALDPFIQIMKPISPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGV 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMVLDQIL 268



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 18/196 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  L A+ I++   F    L   S  +   L P + IM+ I  L ++   +    +
Sbjct: 93  GRVMLGYLIAVAIAIPLGF----LIGMSPLMSKALDPFIQIMKPISPLAWMPLALYTIKD 148

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + L+AIF IF   VW M  +    + ++ ++   V+R+  +   ++ + + +
Sbjct: 149 --------SSLSAIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVIL 200

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  ++ A+
Sbjct: 201 PAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAI 254

Query: 246 LTMLGVIFLYDQLLFR 261
           L +  V  + DQ+L R
Sbjct: 255 LLIGVVGMVLDQILAR 270


>gi|323497142|ref|ZP_08102162.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323317717|gb|EGA70708.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 322

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++A+ + IP+GI +G    +     P  QLL       + P+V   VS  Y   +P    
Sbjct: 124 LLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 183

Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S     L +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 243

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 257 LIAAEMLAQN------PGLGKFV 273


>gi|329732605|gb|EGG68955.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 253

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|213966520|ref|ZP_03394686.1| taurine ABC transporter, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213950836|gb|EEB62252.1| taurine ABC transporter, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 314

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 19/183 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S+ +  V+ P +  ++S+P LG++   +V+F        +G +++ +  +F +    +
Sbjct: 146 SRSQAVRAVVEPYISFLRSLPPLGYIGLLIVWFG-------VG-DVSKVVLLFLATFPII 197

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T +    +  IP+D    +R+   +  Q F ++ VP ++PGL+  + ++    W  +VA+
Sbjct: 198 TIATLTGIIGIPQDWNRAARTLGATNSQVFRHVIVPGTLPGLINGIRLANGMSWACIVAA 257

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLF---RPMIVW 266
           EM    D +   PGIG  +A     Q   A+  A + ++G+   + DQ+L    R +  W
Sbjct: 258 EM---NDGI---PGIGG-VAYVSGTQLETALTIAAMILIGITAVIVDQILLFAERRLAPW 310

Query: 267 SNK 269
             K
Sbjct: 311 HGK 313


>gi|16124864|ref|NP_419428.1| nitrate ABC transporter permease [Caulobacter crescentus CB15]
 gi|221233583|ref|YP_002516019.1| nitrate transport permease protein NrtB [Caulobacter crescentus
           NA1000]
 gi|13421816|gb|AAK22596.1| nitrate ABC transporter, permease protein [Caulobacter crescentus
           CB15]
 gi|220962755|gb|ACL94111.1| nitrate transport permease protein nrtB [Caulobacter crescentus
           NA1000]
          Length = 296

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  +++++P L +L  ++  F    P        +A+F IF + +W +  +    + 
Sbjct: 137 LDPIFQVLRTVPPLAWLPISLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVR 188

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           NIP D   V++  RLS  + F+ + +P + P +   + + +   W  +VASEM++ G
Sbjct: 189 NIPSDYVNVAKVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGG 245



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475
            + P  Q+L   P   + P  +S  +++   P+   +L +IF T  W I+ N   G    
Sbjct: 136 SLDPIFQVLRTVPPLAWLP--ISLAAFHQAQPS---ALFVIFITAIWPIIINTAVGVRNI 190

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P+D+  VA    ++   ++  I+LP   PY  TG     G +W A + SE+       L 
Sbjct: 191 PSDYVNVAKVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEML------LG 244

Query: 536 TTGLGAYIAESTEKGSFPEVVLGV 559
             G+G +I +        ++++G+
Sbjct: 245 GVGIGFFIWDQYNASRISDILVGL 268


>gi|302331920|gb|ADL22113.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 253

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|187927343|ref|YP_001897830.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii
           12J]
 gi|187724233|gb|ACD25398.1| nitrate ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
          Length = 283

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A++I IP G  IG    +++   P   LL       + P  +  + +   NP    ++ 
Sbjct: 104 MAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKSANPAAIWAIF 161

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY +TG   + G
Sbjct: 162 IC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIG 219

Query: 516 GAWNASIVSEVASWG 530
            AW   + +E+ + G
Sbjct: 220 TAWLVIVAAEMLTGG 234


>gi|119897234|ref|YP_932447.1| putative nitrate transport system permease [Azoarcus sp. BH72]
 gi|119669647|emb|CAL93560.1| putative nitrate transport system, permease protein [Azoarcus sp.
           BH72]
          Length = 310

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  ++ PI+ +++ +  L +L   ++ F    P        AA + IF   +W M  +  
Sbjct: 149 LSQMMNPIISLLRPVSPLAWLPIGLLVFQRADP--------AATWTIFICSIWPMILNTA 200

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q +  +P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 201 QGVTRVPQDYLNVARVLNLSEWKVFTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTG 260

Query: 216 G 216
           G
Sbjct: 261 G 261



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   IA+++ IP G  +G    +S  + P   LL       + P  +  + +  
Sbjct: 121 SLQRVGIGFGIAALVGIPAGFMLGRFAVLSQMMNPIISLLRPVSPLAWLP--IGLLVFQR 178

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  I+ P + PY
Sbjct: 179 ADPAATWTIFIC--SIWPMILNTAQGVTRVPQDYLNVARVLNLSEWKVFTKILFPAVLPY 236

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +++ + ++   
Sbjct: 237 MLTGIRLSIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLKVEHIIIAIFVIGTV 290

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 291 GLILEQAL 298


>gi|163850691|ref|YP_001638734.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|218529414|ref|YP_002420230.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|163662296|gb|ABY29663.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|218521717|gb|ACK82302.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 273

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVVV   + + + +P+G+++G    I   I P  Q+L   P   + PL    + ++ 
Sbjct: 80  SLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A S   +    +R +ILP   PY
Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++GA    G A+   IV+E+ +         GLG  I E+ E     +++ G+L +   
Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 249

Query: 566 VLALN 570
            L ++
Sbjct: 250 GLVID 254


>gi|49482416|ref|YP_039640.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|221140719|ref|ZP_03565212.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|257424312|ref|ZP_05600741.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426989|ref|ZP_05603391.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429626|ref|ZP_05606013.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432273|ref|ZP_05608636.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435232|ref|ZP_05611283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282902764|ref|ZP_06310657.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907166|ref|ZP_06315014.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282907508|ref|ZP_06315350.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282912411|ref|ZP_06320207.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282913030|ref|ZP_06320822.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282915503|ref|ZP_06323275.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus D139]
 gi|282921446|ref|ZP_06329164.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C427]
 gi|282922657|ref|ZP_06330347.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C101]
 gi|283767915|ref|ZP_06340830.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus H19]
 gi|283959621|ref|ZP_06377062.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293498084|ref|ZP_06665938.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293511673|ref|ZP_06670367.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus M809]
 gi|293550283|ref|ZP_06672955.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295426719|ref|ZP_06819358.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297589080|ref|ZP_06947721.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|304380137|ref|ZP_07362857.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|49240545|emb|CAG39202.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257273330|gb|EEV05432.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276620|gb|EEV08071.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257280107|gb|EEV10694.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283152|gb|EEV13284.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285828|gb|EEV15944.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|269939700|emb|CBI48068.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282314878|gb|EFB45264.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C101]
 gi|282315861|gb|EFB46245.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C427]
 gi|282320606|gb|EFB50944.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus D139]
 gi|282323130|gb|EFB53449.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282324107|gb|EFB54423.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282328413|gb|EFB58684.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330065|gb|EFB59586.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282597223|gb|EFC02182.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|283461794|gb|EFC08878.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus H19]
 gi|283469415|emb|CAQ48626.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283789213|gb|EFC28040.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290919330|gb|EFD96406.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291097015|gb|EFE27273.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291465631|gb|EFF08163.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus M809]
 gi|295129171|gb|EFG58798.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297577591|gb|EFH96304.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|302750054|gb|ADL64231.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341118|gb|EFM07037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312436716|gb|ADQ75787.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194629|gb|EFU25018.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|329312871|gb|AEB87284.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus T0131]
          Length = 253

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|325122235|gb|ADY81758.1| sulfonate/nitrate/taurine transport system permease protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 262

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 15/170 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            +  TL A S+ L  ++ P+ + ++ +P+LG      ++F N         E A IF I 
Sbjct: 88  LILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  + +  + +Q L +     +E++R ++ S W+KF  + +P ++P ++  + +++   
Sbjct: 140 LASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAVPFT 199

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGV 251
           W    ASE++          G+G+ +  A    E D+L +    +T+ G 
Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGA 244


>gi|317121395|ref|YP_004101398.1| binding-protein-dependent transporters inner membrane component
           [Thermaerobacter marianensis DSM 12885]
 gi|315591375|gb|ADU50671.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter marianensis DSM 12885]
          Length = 285

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 22/172 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+SRR+  +++P+LD MQ++P   +L   ++ F  L P   +   LA +          +
Sbjct: 118 AESRRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP---VPGTLATVVYALPPVARLV 174

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              + Q    +P D +E +R+F  + WQ    + +P ++P    G+    MM+++     
Sbjct: 175 DLGIRQ----VPADAQEAARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALA----M 226

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+  G       G+G  +  AI+  D  A   A  T++ +  + D+L
Sbjct: 227 VVVASMVGAG-------GVGEAVMRAIQRVDPGAGFEAGFTIVALAIVMDRL 271


>gi|120553119|ref|YP_957470.1| binding-protein-dependent transport systems inner membrane
           component [Marinobacter aquaeolei VT8]
 gi|120322968|gb|ABM17283.1| binding-protein-dependent transport systems inner membrane
           component [Marinobacter aquaeolei VT8]
          Length = 330

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443
           ++  V+    +AS+I +P+GI  G   +  + + P  Q+        + PLV   VS  Y
Sbjct: 128 SLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKPVSPLAWLPLVTMVVSATY 187

Query: 444 YHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +P    S L     +   + W  L N   G +A   D   V+    ++ W   R ++
Sbjct: 188 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVV 247

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           LP   P   TG   + G AW   I +E+ +      ++ GLG ++ +  + GS
Sbjct: 248 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGS 294



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L ++  +    +W    +    +  +  DL  VSR  RLS W     + +P S+P +   
Sbjct: 199 LTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVVLPSSVPMIFTG 258

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVI 252
           + +S+   W  ++A+EM+         PG+G ++    +    Q L  I+ A+L +  + 
Sbjct: 259 LRVSLGIAWMVLIAAEMLAQS------PGLGKFVWDEFQNGSSQSLSRIMVAVLAIGFIG 312

Query: 253 FLYDQ--LLFRPMIVWSN 268
           FL D+  LL +  + W+ 
Sbjct: 313 FLLDRVMLLIQRKVAWNE 330


>gi|282165192|ref|YP_003357577.1| ABC transporter permease protein [Methanocella paludicola SANAE]
 gi|282157506|dbj|BAI62594.1| ABC transporter permease protein [Methanocella paludicola SANAE]
          Length = 258

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++A+++ IP+G+ +G+ P IS    P  +++   P   +  L    + ++ 
Sbjct: 62  SLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPVIEVIRPIPPIAWIGL---ALLWFG 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +  N  + L+ I G  + IL N I G         EVA +F    W   R ++LP   P 
Sbjct: 119 IGLNSAIFLVFI-GAFFPILLNTIDGVRNVDKRLIEVAYTFGAGDWNVLRKVVLPAASPI 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G  W   + +E+ +         GLG  I E +       V++G+L +   
Sbjct: 178 IYTGMRVGMGIGWMCVVAAEMIA------VKFGLGNMILEGSNLLQTDVVMVGMLTIGLM 231

Query: 566 VLALN 570
            LA+N
Sbjct: 232 GLAIN 236



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
           P D+ + ++ + LD  SL   A  + LR+L   +++ +              + +V  P+
Sbjct: 39  PTDVFMTMLSMALD-GSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPV 97

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +++++ IP + ++   +++F        IG   +AIF +F    + +  +    + N+ +
Sbjct: 98  IEVIRPIPPIAWIGLALLWFG-------IGLN-SAIFLVFIGAFFPILLNTIDGVRNVDK 149

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L EV+ +F    W     + +P + P +   M + M  GW  VVA+EMI V
Sbjct: 150 RLIEVAYTFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIAV 201


>gi|71907775|ref|YP_285362.1| binding-protein dependent transport system inner membrane protein
           [Dechloromonas aromatica RCB]
 gi|71847396|gb|AAZ46892.1| Binding-protein-dependent transport systems inner membrane
           component [Dechloromonas aromatica RCB]
          Length = 271

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 24/192 (12%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+   +I + + +P G+ +G    I +   P  Q+L   P   + PL +       
Sbjct: 78  SLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPIPPIAYIPLAI------- 130

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  L       L+  G  + +L N IAG       +   A +  +  W  +  +I
Sbjct: 131 ----LWFGLGNPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGVNQWTMFTRVI 186

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY + G     G A+   IVSE+ +         GLG  I E+ E     +++ G
Sbjct: 187 LPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAG 240

Query: 559 VLIMCCFVLALN 570
           ++ +    LA++
Sbjct: 241 MITIGLLGLAID 252


>gi|309779956|ref|ZP_07674710.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308921315|gb|EFP66958.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 287

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 184 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A++I IP G  IG    +++   P   LL       + P  +  + +  
Sbjct: 98  SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPY 213

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG 238


>gi|88798426|ref|ZP_01114011.1| nitrate transporter system, permease component [Reinekea sp.
           MED297]
 gi|88778866|gb|EAR10056.1| nitrate transporter system, permease component [Reinekea sp.
           MED297]
          Length = 328

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 17/191 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452
           ++AS I IP+GI IG    +     P  Q+L       + PLV   VS  Y   +P    
Sbjct: 130 LLASAIAIPLGILIGLNQFVYMAANPIIQVLKPVSPLAWLPLVTIVVSAVYVSDDPMFEK 189

Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S     + +   + W  L N   G ++  +DF  ++    +      R I+LP   P   
Sbjct: 190 SFVTSVITVTLCSLWPTLLNTAVGVASIESDFNNISRVLKLKSLTHVRKIVLPASVPMIF 249

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G AW   I +E+ +      +  GLG ++ +  + G   S   ++  VL++  
Sbjct: 250 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLSRILAAVLVIGL 303

Query: 565 FVLALNR-FLW 574
               L+R  LW
Sbjct: 304 VGFLLDRAMLW 314


>gi|240137745|ref|YP_002962217.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
 gi|254560317|ref|YP_003067412.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium
           extorquens DM4]
 gi|240007714|gb|ACS38940.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
 gi|254267595|emb|CAX23437.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens DM4]
          Length = 261

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVVV   + + + +P+G+++G    I   I P  Q+L   P   + PL    + ++ 
Sbjct: 68  SLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPL---SILWFG 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A S   +    +R +ILP   PY
Sbjct: 125 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++GA    G A+   IV+E+ +         GLG  I E+ E     +++ G+L +   
Sbjct: 184 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 237

Query: 566 VLALN 570
            L ++
Sbjct: 238 GLVID 242


>gi|302186230|ref|ZP_07262903.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 282

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + + LS ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAASK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL R     + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLARLEKRFLAWRDTFNGQSREG 282



 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   + ++ +R  R I+
Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       + GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ASKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|289207851|ref|YP_003459917.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
 gi|288943482|gb|ADC71181.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
          Length = 311

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  +++++P L +L  ++  F    P        +AIF IF + +W +  +    + 
Sbjct: 152 LDPLFQVLRTVPPLAWLPISLAAFQASNP--------SAIFVIFITAIWPIIINTSVGIR 203

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NI +D   V+R  RL+G++ F  + +P + P +   + + +   W  +VA+EM++ G   
Sbjct: 204 NISQDYVNVARVLRLNGFEYFTKIMLPAAAPYVFSGLRIGIGLAWLAIVAAEMLIGGV-- 261

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     L  I+ A++ +  V F  D+L+
Sbjct: 262 ----GIGFFIWDAWNASMLSDIVLALVYVGLVGFFLDRLV 297



 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A +  I +G+ +G        + P  Q+L   P   + P  +S 
Sbjct: 115 WQLLASLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLDPLFQVLRTVPPLAWLP--ISL 172

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   NP+   ++ +IF T  W I+ N   G      D+  VA    + G+ ++  I+L
Sbjct: 173 AAFQASNPS---AIFVIFITAIWPIIINTSVGIRNISQDYVNVARVLRLNGFEYFTKIML 229

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  +G     G AW A + +E+   G       G+G +I ++       ++VL +
Sbjct: 230 PAAAPYVFSGLRIGIGLAWLAIVAAEMLIGG------VGIGFFIWDAWNASMLSDIVLAL 283

Query: 560 LIMCCFVLALNRFL 573
           + +      L+R +
Sbjct: 284 VYVGLVGFFLDRLV 297


>gi|294341758|emb|CAZ90183.1| Nitrate transporter component [Thiomonas sp. 3As]
          Length = 304

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L P++ +++ +  L +L   +  F N        A  AAI+ IF   +W M  +  
Sbjct: 142 LNRMLSPLISLLRPVSPLAWLPIGLYVFSN--------APAAAIYTIFICSIWPMMINTA 193

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP D   V+R   LS W+ F  + +P  MP ++  + +S+   W  +VA+EM+  
Sbjct: 194 IGVQRIPADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTG 253

Query: 216 GDTV 219
           G  +
Sbjct: 254 GTGI 257



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 13/207 (6%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           + WQS   +  H  Y +    + +G     ++ RV     +A+++ IP+G  IG    ++
Sbjct: 84  VTWQSAQKVFAHPFYDNGPNDVGIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLN 143

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P   LL       + P+ +    Y   N        +   + W ++ N   G    
Sbjct: 144 RMLSPLISLLRPVSPLAWLPIGL----YVFSNAPAAAIYTIFICSIWPMMINTAIGVQRI 199

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D+  VA    ++ W+ +  I+LP + PY +TG   + G AW   + +E+ + G     
Sbjct: 200 PADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGG----- 254

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIM 562
            TG+G ++       +   +++ +L++
Sbjct: 255 -TGIGFWLWNEWNNLNLAHIIIAILVI 280


>gi|15923164|ref|NP_370698.1| hypothetical protein SAV0174 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925878|ref|NP_373411.1| hypothetical protein SA0168 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21281877|ref|NP_644963.1| hypothetical protein MW0148 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485050|ref|YP_042271.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|148266599|ref|YP_001245542.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|150392638|ref|YP_001315313.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|156978504|ref|YP_001440763.1| hypothetical protein SAHV_0173 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316390|ref|ZP_04839603.1| hypothetical protein SauraC_09651 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253734736|ref|ZP_04868901.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255004970|ref|ZP_05143571.2| hypothetical protein SauraM_00835 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794012|ref|ZP_05642991.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258408580|ref|ZP_05680865.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421170|ref|ZP_05684097.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
 gi|258438920|ref|ZP_05690011.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258444155|ref|ZP_05692489.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258447034|ref|ZP_05695184.1| ABC transporter, permease [Staphylococcus aureus A6300]
 gi|258448492|ref|ZP_05696605.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|258455725|ref|ZP_05703680.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|269201825|ref|YP_003281094.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282893330|ref|ZP_06301563.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8117]
 gi|282926281|ref|ZP_06333913.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A10102]
 gi|295405444|ref|ZP_06815254.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8819]
 gi|296276222|ref|ZP_06858729.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297209321|ref|ZP_06925720.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244781|ref|ZP_06928661.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8796]
 gi|300911320|ref|ZP_07128769.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|13700090|dbj|BAB41389.1| SA0168 [Staphylococcus aureus subsp. aureus N315]
 gi|14245941|dbj|BAB56336.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
 gi|21203312|dbj|BAB94013.1| MW0148 [Staphylococcus aureus subsp. aureus MW2]
 gi|49243493|emb|CAG41917.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|147739668|gb|ABQ47966.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|149945090|gb|ABR51026.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|156720639|dbj|BAF77056.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|253727215|gb|EES95944.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257787984|gb|EEV26324.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257840589|gb|EEV65048.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842594|gb|EEV67016.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
 gi|257847796|gb|EEV71792.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850414|gb|EEV74362.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854047|gb|EEV77000.1| ABC transporter, permease [Staphylococcus aureus A6300]
 gi|257858123|gb|EEV81011.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|257861937|gb|EEV84710.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|262074115|gb|ACY10088.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282591610|gb|EFB96681.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A10102]
 gi|282764016|gb|EFC04143.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8117]
 gi|285815899|gb|ADC36386.1| ABC transporter permease protein with unknown substrate
           [Staphylococcus aureus 04-02981]
 gi|294969519|gb|EFG45538.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8819]
 gi|296886254|gb|EFH25188.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178298|gb|EFH37545.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8796]
 gi|300887499|gb|EFK82695.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|312828698|emb|CBX33540.1| binding-protein-dependent transport system inner membrane component
           family protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315130148|gb|EFT86136.1| hypothetical protein CGSSa03_04749 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725698|gb|EGG62177.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 253

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|57651175|ref|YP_185058.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161514|ref|YP_492890.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88193951|ref|YP_498738.1| hypothetical protein SAOUHSC_00138 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151220330|ref|YP_001331153.1| hypothetical protein NWMN_0118 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508439|ref|YP_001574098.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|258451611|ref|ZP_05699637.1| ABC transporter [Staphylococcus aureus A5948]
 gi|262048266|ref|ZP_06021152.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30]
 gi|262051065|ref|ZP_06023290.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3]
 gi|284023186|ref|ZP_06377584.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|294849107|ref|ZP_06789851.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9754]
 gi|57285361|gb|AAW37455.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127488|gb|ABD22002.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201509|gb|ABD29319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150373130|dbj|BAF66390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160367248|gb|ABX28219.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257860659|gb|EEV83481.1| ABC transporter [Staphylococcus aureus A5948]
 gi|259160968|gb|EEW45987.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3]
 gi|259163576|gb|EEW48132.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30]
 gi|294823999|gb|EFG40424.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9754]
 gi|315198394|gb|EFU28724.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141497|gb|EFW33338.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142247|gb|EFW34062.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329731875|gb|EGG68235.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 253

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|291619197|ref|YP_003521939.1| TauC [Pantoea ananatis LMG 20103]
 gi|291154227|gb|ADD78811.1| TauC [Pantoea ananatis LMG 20103]
          Length = 276

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI +G  P + + I P  +L    P   + PL+V        +  + L  L IF   
Sbjct: 100 IPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ + +AG           A+S   T W+  R++ILPG  P  +TG     G  W+  
Sbjct: 158 --VVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLGVGWSTL 215

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T GLG  +  + E  +   V+ G+ ++      L 
Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLE 258


>gi|262369775|ref|ZP_06063103.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Acinetobacter johnsonii SH046]
 gi|262315843|gb|EEY96882.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Acinetobacter johnsonii SH046]
          Length = 273

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+    +I      ++A L   ++++   L P    ++SIP L ++   +++     
Sbjct: 80  STWRVFLGFLIGSALALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLLLWLGIDE 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++  + R L EV+R +RL  WQ+   + +P 
Sbjct: 140 ASKITLIAIGAFFPTYTNTV--------AAIKGVDRKLIEVARVYRLKYWQQVQQIILPA 191

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
           + PG++  +  S+S  W F++A+E+I
Sbjct: 192 ASPGILTGLRNSLSLAWMFMIAAELI 217



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +RV +  +I S + +   I +G    + + ++P    + + P+  + PL++       
Sbjct: 80  STWRVFLGFLIGSALALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLL------- 132

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  +    N +A          EVA  + +  W+  + II
Sbjct: 133 ----LWLGIDEASKITLIAIGAFFPTYTNTVAAIKGVDRKLIEVARVYRLKYWQQVQQII 188

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   +   AW   I +E+ +       T G+G Y+     + S P++V+ 
Sbjct: 189 LPAASPGILTGLRNSLSLAWMFMIAAELIA------ATQGIG-YLLSDGRETSRPDIVIL 241

Query: 559 VLIMCC 564
            +I+  
Sbjct: 242 AIILLA 247


>gi|220909929|ref|YP_002485240.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7425]
 gi|219866540|gb|ACL46879.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7425]
          Length = 280

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V  ++A+++ I +GI IG    I   +    Q+L   P   + PL  S 
Sbjct: 85  WHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPL--SL 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             +    P+   ++ +IF T  W I+ N   G    P D++ VA    ++   ++  I+L
Sbjct: 143 AMFRDNQPS---AIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVEYFLNILL 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L +
Sbjct: 200 PSTVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIILAL 253

Query: 560 L 560
           +
Sbjct: 254 I 254



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 14/157 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  +++++P L +L  ++  F +  P        +AIF IF + +W +  +    +  +P
Sbjct: 125 VFQVLRTVPPLAWLPLSLAMFRDNQP--------SAIFVIFITAIWPIIINTAVGVQQVP 176

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +D   V++  +LS  + F  + +P ++P +   + + +   W  +VA+EM++ G      
Sbjct: 177 QDYRNVAKVLKLSRVEYFLNILLPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGGV----- 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GIG +I  A     +  I+ A++ +  V F+ D+L+
Sbjct: 232 -GIGFFIWDAWNSSLISEIILALIYVGIVGFILDKLV 267


>gi|166368071|ref|YP_001660344.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
 gi|166090444|dbj|BAG05152.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
          Length = 256

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 10/174 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+V +++AS I +P+G+ IG    + S +    Q L       + PL V  +       
Sbjct: 71  RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPLAVMVLGI----G 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +L +  L+     W IL N  AG +A    +  +A S   T       IILP I  + +T
Sbjct: 127 DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILSHLLT 186

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G   A G  W   + +E+         + GLG YI ++ ++ ++ E++  +L++
Sbjct: 187 GFRLAIGIIWIVLVPAEMLG------VSAGLGYYILDTRDRLAYSELMAVILVI 234


>gi|284052996|ref|ZP_06383206.1| nitrate ABC transporter, permease protein [Arthrospira platensis
           str. Paraca]
 gi|291568385|dbj|BAI90657.1| putative nitrate ABC transport permease protein [Arthrospira
           platensis NIES-39]
          Length = 271

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   I++ RV +  I+AS+I +P+GI IG     +    P+ QLL       + PL +  
Sbjct: 78  WNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLGL-- 135

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             Y   +       +++  + W  L N   G S   +D+ +VA +   + WR    +I+P
Sbjct: 136 --YLFRDSEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIP 193

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              P  ++G   + G +W   + +E+       L  TGLG +I
Sbjct: 194 AALPNIISGLRISMGISWLVIVAAEM-------LLGTGLGYFI 229



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 43/81 (53%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E   IF I  S +W    +    + N+  D  +V+R+   S W+  + + +P ++P ++
Sbjct: 141 SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNII 200

Query: 194 WNMMMSMSGGWFFVVASEMIV 214
             + +SM   W  +VA+EM++
Sbjct: 201 SGLRISMGISWLVIVAAEMLL 221


>gi|147920986|ref|YP_685204.1| putative ABC-type sulfonate import system, permease component
           [uncultured methanogenic archaeon RC-I]
 gi|110620600|emb|CAJ35878.1| putative ABC-type sulfonate import system, permease component
           [uncultured methanogenic archaeon RC-I]
          Length = 257

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  + A ++ +P+GI +G+   IS  + P  ++L   P     P+    ++   
Sbjct: 62  SLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEVLRPIP-----PIAWIGLALLW 116

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            N  L  ++ ++F G  + IL N ++G         EVA +F  T +   R +++P   P
Sbjct: 117 FNIGLTSAVFLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G  W   + +E+ +         GLG  I E++      +V++G++++  
Sbjct: 177 TIYTGMRVGMGIGWMCVVAAEMVA------VKFGLGNLILEASNFLQTDKVLVGMIMIGI 230

Query: 565 FVLALN 570
             L +N
Sbjct: 231 LGLLIN 236



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 50  DIVPITLDV---HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D++  T+D+     L  +A  + LR++   + +++            R +  V+ P++++
Sbjct: 41  DVLLTTIDMVMDGELFMHAGYSLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEV 100

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP + ++   +++F        IG   +A+F +F   V+ +  +    + N+ R L 
Sbjct: 101 LRPIPPIAWIGLALLWFN-------IGLT-SAVFLVFIGAVFPILLNTVSGVRNVDRKLI 152

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           EV+ +F  + ++    + +P ++P +   M + M  GW  VVA+EM+ V
Sbjct: 153 EVAYTFGATDFEILRKVVMPAALPTIYTGMRVGMGIGWMCVVAAEMVAV 201


>gi|153953414|ref|YP_001394179.1| ProW [Clostridium kluyveri DSM 555]
 gi|219854039|ref|YP_002471161.1| hypothetical protein CKR_0696 [Clostridium kluyveri NBRC 12016]
 gi|146346295|gb|EDK32831.1| ProW [Clostridium kluyveri DSM 555]
 gi|219567763|dbj|BAH05747.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 274

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 19/160 (11%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           PQ      L ++S + ISL+       LA++S     V+ PILD MQ++P   +L   V+
Sbjct: 85  PQTMETLALVIVSTL-ISLIIGIPLGILASRSEGFNRVIRPILDFMQTMPAFVYLIPAVL 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +F     GKV GA    IF++  + ++ N+       +  +P D+ E +RSF  +  Q  
Sbjct: 144 FFGM---GKVPGAISTVIFSMPPAVRLTNL------GIRQVPEDVIEAARSFGSTKSQML 194

Query: 181 WYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           + + +P ++P    G+   +M+S+S     VV S MI  G
Sbjct: 195 YKVQIPIALPTILAGVNQTIMLSLS----MVVISAMIGAG 230


>gi|134097166|ref|YP_001102827.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005377|ref|ZP_06563350.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909789|emb|CAL99901.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 247

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 22/227 (9%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI------------IWIPVGIW 407
           A+  +G +   +     L ++ L  +   R+ +L +IAS+            I +P G+ 
Sbjct: 12  AFSRLGPVPQQYLPPPSLVLVRLAELLGDRMFLLDVIASVLAWAIALGISVVIAVPAGLL 71

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G  P +    +   + L   P+    PL +  +      PN  +SL  ++ + W ILFN
Sbjct: 72  LGSVPAVRVATRAIIEFLRPIPSVALIPLALVLIGS---GPNTKISL-AVYASVWPILFN 127

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I           E A SF +   R    + LP   P+ +TG   +   A    + +E  
Sbjct: 128 TIYALDEMDPVMVETARSFGLGRARVLFSVALPNSAPFVLTGVRMSAAVALILVVSTEFL 187

Query: 528 SWGHIHLRTTGLGAYIAE-STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + G     T+GLG+++ + ST  G    V+ G L+      A+N  L
Sbjct: 188 AGG-----TSGLGSFVLDASTGAGRMDLVLAGTLVAGVIGFAINEAL 229


>gi|154245032|ref|YP_001415990.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159117|gb|ABS66333.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 362

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 16/190 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA++I +P+GI  G     +  I P  Q+        + P+V   VS  +L+P+  +  
Sbjct: 167 LIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPK 226

Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            ++         + W  L N   G ++   D   V     ++     R ++LP   P   
Sbjct: 227 SLVISAVTVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIF 286

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ VL +  
Sbjct: 287 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGI 340

Query: 565 FVLALNRFLW 574
               L+R ++
Sbjct: 341 IGFMLDRIMY 350



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 12/174 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY--PGKVIGAELA-AIFAIFTSQVWN 149
           S+     + P++ I + +  L +L    +    LY  P   +   L  +   +    +W 
Sbjct: 183 SKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSLWP 242

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    + +I +DL  V +  +LS       L +P S+P +   + +S+  GW  ++A
Sbjct: 243 TLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIA 302

Query: 210 SEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260
           +EM+         PG+G ++         D LA I+ A+LT+  + F+ D++++
Sbjct: 303 AEMLAQN------PGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMY 350


>gi|227432669|ref|ZP_03914642.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|227351551|gb|EEJ41804.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
          Length = 573

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A ++SL+       L AKS++  +V+ PILD MQ++P   +L   V +F + + PG    
Sbjct: 107 ASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 162

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P DL E + SF  + WQK + L +P +    +
Sbjct: 163 -----VFASIIFALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTIL 217

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 218 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADV 255


>gi|209526428|ref|ZP_03274956.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
 gi|209493201|gb|EDZ93528.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
          Length = 271

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   I++ RV +  I+AS+I +P+GI IG     +    P+ QLL       + PL +  
Sbjct: 78  WNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLGL-- 135

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             Y   +       +++  + W  L N   G S   +D+ +VA +   + WR    +I+P
Sbjct: 136 --YLFRDSEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIP 193

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              P  ++G   + G +W   + +E+       L  TGLG +I
Sbjct: 194 AALPNIISGLRISMGISWLVIVAAEM-------LLGTGLGYFI 229



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 43/81 (53%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E   IF I  S +W    +    + N+  D  +V+R+   S W+  + + +P ++P ++
Sbjct: 141 SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNII 200

Query: 194 WNMMMSMSGGWFFVVASEMIV 214
             + +SM   W  +VA+EM++
Sbjct: 201 SGLRISMGISWLVIVAAEMLL 221


>gi|260173414|ref|ZP_05759826.1| putative glycine betaine transport system permease protein
           [Bacteroides sp. D2]
 gi|315921686|ref|ZP_07917926.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695561|gb|EFS32396.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 274

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  ++L+F        A S R   +L PILD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTCLALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G     IFA+    V  +T      +  +P+++ E SRSF  + WQ  + + +P
Sbjct: 144 GLGTVPGVFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATRWQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 199 LALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           IAW   G  ++ FT   +L +  +G       T+  V+    +A I  +P+GIW    P 
Sbjct: 56  IAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALIFGVPLGIWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 ADKILRPILDLMQTMPAFVYL---IPAVLFFGLGTVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|327395527|dbj|BAK12949.1| taurine transport system permease protein TauC [Pantoea ananatis
           AJ13355]
          Length = 276

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI +G  P + + I P  +L    P   + PL+V        +  + L  L IF   
Sbjct: 100 IPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ + +AG           A+S   T W+  R++ILPG  P  +TG     G  W+  
Sbjct: 158 --VVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLGVGWSTL 215

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T GLG  +  + E  +   V+ G+ ++      L 
Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLE 258


>gi|227519676|ref|ZP_03949725.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX0104]
 gi|227072900|gb|EEI10863.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX0104]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|257416825|ref|ZP_05593819.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis AR01/DG]
 gi|257158653|gb|EEU88613.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis ARO1/DG]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|257084383|ref|ZP_05578744.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1]
 gi|256992413|gb|EEU79715.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|256963755|ref|ZP_05567926.1| OpuABC [Enterococcus faecalis HIP11704]
 gi|307271702|ref|ZP_07552973.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
 gi|256954251|gb|EEU70883.1| OpuABC [Enterococcus faecalis HIP11704]
 gi|306511580|gb|EFM80579.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|256853947|ref|ZP_05559312.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T8]
 gi|307290350|ref|ZP_07570265.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|256710890|gb|EEU25933.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T8]
 gi|306498543|gb|EFM68045.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|315030307|gb|EFT42239.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4000]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|300692646|ref|YP_003753641.1| nitrate ABC transporter [Ralstonia solanacearum PSI07]
 gi|299079706|emb|CBJ52383.1| nitrate ABC transporter [Ralstonia solanacearum PSI07]
          Length = 283

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A++I IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPY 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 264 GLLLEQAL 271


>gi|116617483|ref|YP_817854.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096330|gb|ABJ61481.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 571

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A ++SL+       L AKS++  +V+ PILD MQ++P   +L   V +F + + PG    
Sbjct: 105 ASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 160

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P DL E + SF  + WQK + L +P +    +
Sbjct: 161 -----VFASIIFALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTIL 215

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 216 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADV 253


>gi|319779828|ref|YP_004139304.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317165716|gb|ADV09254.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 295

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 21/195 (10%)

Query: 69  TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T++ +S +++S +   V         ++S R+  V+ P+LD+MQ++P   +L   V   M
Sbjct: 100 TMKTVSMILVSTIIAIVLGAPVGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVV---M 156

Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            L  GKV G     I+AI    ++ N+   +      + +D+ E + +F  S WQK   +
Sbjct: 157 LLGIGKVPGVIAVVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLRDV 210

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     L+
Sbjct: 211 QIPLALPTIMAGVNQTIMMALAMVVIASMIGV-------QGLGQPVLKAINNQYFTLGLF 263

Query: 244 AMLTMLGVIFLYDQL 258
             L ++G+  ++D++
Sbjct: 264 NGLAIVGIAIIFDRI 278


>gi|299149362|ref|ZP_07042419.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_23]
 gi|298512549|gb|EFI36441.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_23]
          Length = 275

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  ++L+F        A S R   +L PILD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTCLALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G     IFA+    V  +T      +  +P+++ E SRSF  + WQ  + + +P
Sbjct: 144 GLGTVPGVFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATRWQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 199 LALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           IAW   G  ++ FT   +L +  +G       T+  V+    +A I  +P+GIW    P 
Sbjct: 56  IAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALIFGVPLGIWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 ADKILRPILDLMQTMPAFVYL---IPAVLFFGLGTVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|315149978|gb|EFT93994.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0012]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|315148611|gb|EFT92627.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4244]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|29377126|ref|NP_816280.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecalis V583]
 gi|227554134|ref|ZP_03984181.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter protein [Enterococcus faecalis
           HH22]
 gi|229549238|ref|ZP_04437963.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis ATCC 29200]
 gi|255971952|ref|ZP_05422538.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255975006|ref|ZP_05425592.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T2]
 gi|256616850|ref|ZP_05473696.1| OpuABC [Enterococcus faecalis ATCC 4200]
 gi|256763274|ref|ZP_05503854.1| OpuABC [Enterococcus faecalis T3]
 gi|256957876|ref|ZP_05562047.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis DS5]
 gi|256961126|ref|ZP_05565297.1| OpuABC [Enterococcus faecalis Merz96]
 gi|257079813|ref|ZP_05574174.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis JH1]
 gi|257081841|ref|ZP_05576202.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           E1Sol]
 gi|257087618|ref|ZP_05581979.1| ABC transporter permease [Enterococcus faecalis D6]
 gi|257090777|ref|ZP_05585138.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           CH188]
 gi|257420040|ref|ZP_05597034.1| ABC betaine transporter permease and substrate binding protein
           [Enterococcus faecalis T11]
 gi|257421781|ref|ZP_05598771.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           X98]
 gi|293384072|ref|ZP_06629966.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis R712]
 gi|293386886|ref|ZP_06631456.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis S613]
 gi|294781364|ref|ZP_06746706.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|300860960|ref|ZP_07107047.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|307270648|ref|ZP_07551939.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|307276884|ref|ZP_07557995.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|307285514|ref|ZP_07565653.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|307287539|ref|ZP_07567582.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|312902408|ref|ZP_07761614.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|312907977|ref|ZP_07766960.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|312953668|ref|ZP_07772505.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|312978495|ref|ZP_07790233.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
 gi|29344592|gb|AAO82350.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecalis V583]
 gi|227176760|gb|EEI57732.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter protein [Enterococcus faecalis
           HH22]
 gi|229305475|gb|EEN71471.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis ATCC 29200]
 gi|255962970|gb|EET95446.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255967878|gb|EET98500.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T2]
 gi|256596377|gb|EEU15553.1| OpuABC [Enterococcus faecalis ATCC 4200]
 gi|256684525|gb|EEU24220.1| OpuABC [Enterococcus faecalis T3]
 gi|256948372|gb|EEU65004.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis DS5]
 gi|256951622|gb|EEU68254.1| OpuABC [Enterococcus faecalis Merz96]
 gi|256987843|gb|EEU75145.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis JH1]
 gi|256989871|gb|EEU77173.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           E1Sol]
 gi|256995648|gb|EEU82950.1| ABC transporter permease [Enterococcus faecalis D6]
 gi|256999589|gb|EEU86109.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           CH188]
 gi|257161868|gb|EEU91828.1| ABC betaine transporter permease and substrate binding protein
           [Enterococcus faecalis T11]
 gi|257163605|gb|EEU93565.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           X98]
 gi|291078552|gb|EFE15916.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis R712]
 gi|291083720|gb|EFE20683.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis S613]
 gi|294451491|gb|EFG19951.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|295113609|emb|CBL32246.1| ABC-type proline/glycine betaine transport system, permease
           component [Enterococcus sp. 7L76]
 gi|300849999|gb|EFK77749.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|306501277|gb|EFM70580.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|306502738|gb|EFM72003.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|306506521|gb|EFM75680.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|306512958|gb|EFM81599.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|310626068|gb|EFQ09351.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|310628506|gb|EFQ11789.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|310634078|gb|EFQ17361.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|311288644|gb|EFQ67200.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
 gi|315025224|gb|EFT37156.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2137]
 gi|315032769|gb|EFT44701.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0017]
 gi|315035772|gb|EFT47704.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0027]
 gi|315143732|gb|EFT87748.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2141]
 gi|315151935|gb|EFT95951.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0031]
 gi|315155518|gb|EFT99534.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0043]
 gi|315159185|gb|EFU03202.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0312]
 gi|315162244|gb|EFU06261.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0645]
 gi|315164936|gb|EFU08953.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1302]
 gi|315168629|gb|EFU12646.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1341]
 gi|315170114|gb|EFU14131.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1342]
 gi|315173750|gb|EFU17767.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1346]
 gi|315576241|gb|EFU88432.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309B]
 gi|315579182|gb|EFU91373.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0630]
 gi|315582957|gb|EFU95148.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309A]
 gi|323481572|gb|ADX81011.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis 62]
 gi|327535867|gb|AEA94701.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Enterococcus faecalis OG1RF]
 gi|329577362|gb|EGG58818.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TX1467]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|229544994|ref|ZP_04433719.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX1322]
 gi|229309886|gb|EEN75873.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX1322]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|329954688|ref|ZP_08295748.1| glycine betaine transport system permease protein opuAB
           [Bacteroides clarus YIT 12056]
 gi|328527229|gb|EGF54233.1| glycine betaine transport system permease protein opuAB
           [Bacteroides clarus YIT 12056]
          Length = 275

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  ++LL         A S R   ++ PILD MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTCLALLLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P+++ E SRSF  + WQ  + + +P
Sbjct: 144 GLGTVPGAFATVIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATPWQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 199 LALPTIMTGINQTIMMSLS----MVVIAAMISAGG 229


>gi|312900011|ref|ZP_07759329.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
 gi|311293007|gb|EFQ71563.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S  TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F  
Sbjct: 93  STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149

Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T +  N+       +  +P +L E + S+  +GWQK + L 
Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245


>gi|332531267|ref|ZP_08407180.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332039374|gb|EGI75787.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 257

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A++I +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 66  MTVWRVLGGFVLAAVIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       +L+IF G+ + I+  V     A   D  E A +   +     + +++PG  
Sbjct: 126 ELQ-----KVLVIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIPGAA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 181 PEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 234

Query: 564 CFVL-------ALNR--FLWHPL 577
              L       ALNR  F W  L
Sbjct: 235 LIGLVSDFAFKALNRRLFAWSSL 257


>gi|170077483|ref|YP_001734121.1| sulfonate/nitrate transport system permease protein [Synechococcus
           sp. PCC 7002]
 gi|169885152|gb|ACA98865.1| sulfonate/nitrate transport system permease protein [Synechococcus
           sp. PCC 7002]
          Length = 278

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   I++ RV +  + AS + +P+GI IG  P       PF QLL       + PL    
Sbjct: 85  WNLLISLRRVAIGYLAASCVAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPL---- 140

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              Y L  +    + +IF  + W  L N   G +    ++ +VA +   + +R    +I+
Sbjct: 141 -GLYVLRDSEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVII 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  ++G   + G AW   + +E+       L  TGLG +I         P +++ +
Sbjct: 200 PAALPNILSGLRISMGIAWLVIVAAEM-------LLGTGLGYFIWNEWNNLYIPNILVAI 252

Query: 560 LIMCCFVLALN 570
           LI+    L L+
Sbjct: 253 LIIGLVGLILD 263



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/81 (22%), Positives = 45/81 (55%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E   +F IF S +W    +    + N+ ++  +V+++   S ++  + + +P ++P ++
Sbjct: 148 SEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVIIPAALPNIL 207

Query: 194 WNMMMSMSGGWFFVVASEMIV 214
             + +SM   W  +VA+EM++
Sbjct: 208 SGLRISMGIAWLVIVAAEMLL 228


>gi|300705265|ref|YP_003746868.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299072929|emb|CBJ44285.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957]
          Length = 283

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 94  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 264 GLLLEQAL 271


>gi|150398812|ref|YP_001322579.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
 gi|150011515|gb|ABR53967.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
          Length = 277

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 15/187 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L++ +I+LL       L A+S+ + +++ PILDIMQ++P L +L   V++F     G+V
Sbjct: 97  ILTSTIIALLIGIPLGILKARSKTINLIISPILDIMQTLPSLAYLIPAVLFF---GIGEV 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G     IFA+    +      + Q    +  +L EV R+F  + WQ    + +P ++P 
Sbjct: 154 PGIIATVIFAM-PPAIKLTALGIEQ----VSDELVEVGRAFGSTSWQILTKIELPTALPS 208

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  ++   +  VV +  I  G       G+G  I   I+   L   L A + +  +
Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 262 AMIFDRI 268


>gi|113866388|ref|YP_724877.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525164|emb|CAJ91509.1| ABC-type transporter, permease component: NitT family [Ralstonia
           eutropha H16]
          Length = 301

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +  P++ +++ +  L +L   ++ F    P        AAI+AIF   +W M  +  
Sbjct: 140 LNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTA 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 192 VGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 251

Query: 216 GDTV 219
           G  +
Sbjct: 252 GTGI 255



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP G  IG    +++   P   LL       + P  +  
Sbjct: 107 WNVLASLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLP--IGL 164

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +   NP    ++ +   + W ++ N   G +  P D+  VA    ++ W+ +  ++ P
Sbjct: 165 LLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFP 222

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            + PY +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ + 
Sbjct: 223 AVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIF 276

Query: 561 IM 562
           ++
Sbjct: 277 VI 278


>gi|188591095|ref|YP_001795695.1| nitrate ABC transporter transmembrane protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937989|emb|CAP62973.1| NITRATE ABC TRANSPORTER, TRANSMEMBRANE component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 296

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +  P++ +++ +  L +L   ++ F    P        AAI+AIF   +W M  +  
Sbjct: 135 LNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTA 186

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 187 VGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 246

Query: 216 GDTV 219
           G  +
Sbjct: 247 GTGI 250



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP G  IG    +++   P   LL       + P  +  
Sbjct: 102 WNVLASLARVAAGFGLAALVGIPAGFVIGRFAFLNAMTAPVISLLRPVSPLAWLP--IGL 159

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +   NP    ++ +   + W ++ N   G +  P D+  VA    ++ W+ +  ++ P
Sbjct: 160 LLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFP 217

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            + PY +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ + 
Sbjct: 218 AVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIF 271

Query: 561 IM 562
           ++
Sbjct: 272 VI 273


>gi|254461331|ref|ZP_05074747.1| nitrate ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677920|gb|EDZ42407.1| nitrate ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 277

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 16/190 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   +++ L       L   SR     L P + +++ I  L ++   +    +     
Sbjct: 92  RVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQD----- 146

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +E +AIF IF   +W M  +    +  +  D   V+R+  L   +  + + +P + P
Sbjct: 147 ---SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVILPAAAP 203

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIG 256

Query: 251 VI-FLYDQLL 259
           V+  L D  L
Sbjct: 257 VVGMLLDAAL 266



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+V  ++A++I IP+G  IG        + PF Q+L       + PL +  +    
Sbjct: 89  SIYRVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQDSE 148

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +   +    +ILP   P
Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVILPAAAP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             VTG   + G AW   + +E+   G      TG+G Y+
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236


>gi|332140154|ref|YP_004425892.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550176|gb|AEA96894.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 331

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V+V   IAS++ +PVGI  G      + I P  QL        + PLV   VS  +
Sbjct: 124 SLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 183

Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +   S   +           W  L N   G S    D   V+    +T       I+
Sbjct: 184 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIV 243

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +      L+R +
Sbjct: 298 MVAVLTIGVIGFVLDRLM 315



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + NI +DL  VS+  RL+       + +P S+P +   + +S+  GW  
Sbjct: 206 LWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIVLPSSIPMIFTGLRLSLGIGWMV 265

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +    + L  I+ A+LT+  + F+ D+L+ 
Sbjct: 266 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGVIGFVLDRLML 316


>gi|17545099|ref|NP_518501.1| nitrate transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17427389|emb|CAD13908.1| putative nitrate transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 287

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A++I IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 98  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 268 GLLLEQAL 275


>gi|254447035|ref|ZP_05060502.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [gamma proteobacterium HTCC5015]
 gi|198263174|gb|EDY87452.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [gamma proteobacterium HTCC5015]
          Length = 340

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 15/195 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443
           +++ V    ++A++I IP+GI  G    ++S + P  Q+        + P+V   VS  Y
Sbjct: 133 SLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVY 192

Query: 444 YHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +P L  S L     +   + W  L N   G S+   D   V+    +  +     ++
Sbjct: 193 VSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVV 252

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS     LG
Sbjct: 253 LPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS--SSSLG 304

Query: 559 VLIMCCFVLALNRFL 573
            +++  F +    FL
Sbjct: 305 RIMVAVFTIGFIGFL 319



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 12/193 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +++ L +     L   S ++   L P++ + + +  L +L    +    +Y      
Sbjct: 139 TGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVYVSDDPM 198

Query: 134 AE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            E   L +   +    +W    +    + +I  DL  VSR  RL  + K + + +P +MP
Sbjct: 199 LEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVVLPAAMP 258

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLT 247
            +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A+ T
Sbjct: 259 MMFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLGRIMVAVFT 312

Query: 248 MLGVIFLYDQLLF 260
           +  + FL D+++ 
Sbjct: 313 IGFIGFLLDRVML 325


>gi|207742226|ref|YP_002258618.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206593614|emb|CAQ60541.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 287

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 98  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 268 GLLLEQAL 275


>gi|153955671|ref|YP_001396436.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219856045|ref|YP_002473167.1| hypothetical protein CKR_2702 [Clostridium kluyveri NBRC 12016]
 gi|146348529|gb|EDK35065.1| Predicted ABC transporter, permease protein [Clostridium kluyveri
           DSM 555]
 gi|219569769|dbj|BAH07753.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 260

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 21/196 (10%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+    YQ  LY     CI +F    L +  ++I+   G  IG      + I P   +L 
Sbjct: 59  IIQKEFYQHALY----SCIRIFIGCTLALPIAVIF---GFLIGLTKFGENFILPIFDMLR 111

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVAS 484
             P   + P+ +       + P++  S++ I   G  + IL N IAG  A  +   E A 
Sbjct: 112 PIPQIAWIPIAI------LIFPSVEGSIIFITFLGAFFPILVNTIAGTQAANSLLIEAAK 165

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   + W+  RY+  P   P   TG     G +W + I +E+ S  +      G+G Y  
Sbjct: 166 SMSASKWQLIRYVSFPSAVPNIFTGLTIGIGSSWMSVIAAEMISGKY------GIGYYTW 219

Query: 545 ESTEKGSFPEVVLGVL 560
            S     +PE ++G++
Sbjct: 220 TSYTLMQYPETIIGMI 235



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 92/207 (44%), Gaps = 16/207 (7%)

Query: 13  RRIFPNIFDLLAFVLV------IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           ++I   +F +L F++V      + I   L+ G      P D+   +   +      Q+A 
Sbjct: 12  KKILCKVFSILVFIIVWQLLVNLNIKRPLMFG--NLPSPLDVFQTLKTIIIQKEFYQHAL 69

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            + +R+     ++L    ++  L   ++     ++PI D+++ IP + ++   ++ F ++
Sbjct: 70  YSCIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIFPSV 129

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +    L A F I  +     T +  Q+  ++   L E ++S   S WQ   Y+  P
Sbjct: 130 EGSIIFITFLGAFFPILVN-----TIAGTQAANSL---LIEAAKSMSASKWQLIRYVSFP 181

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++P +   + + +   W  V+A+EMI
Sbjct: 182 SAVPNIFTGLTIGIGSSWMSVIAAEMI 208


>gi|299068062|emb|CBJ39276.1| nitrate ABC transporter [Ralstonia solanacearum CMR15]
          Length = 283

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A++I IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 264 GLLLEQAL 271


>gi|83746841|ref|ZP_00943888.1| NrtB [Ralstonia solanacearum UW551]
 gi|83726426|gb|EAP73557.1| NrtB [Ralstonia solanacearum UW551]
          Length = 283

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 94  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 264 GLLLEQAL 271


>gi|94309221|ref|YP_582431.1| nitrate transport permease [Cupriavidus metallidurans CH34]
 gi|93353073|gb|ABF07162.1| ABC-type transporter, permease component: NitT family [Cupriavidus
           metallidurans CH34]
          Length = 303

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +  P++ +++ +  L +L   ++ F    P        AAI+AIF   +W M  +  
Sbjct: 142 LNAMASPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMIINTA 193

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P+D   V+R   LS W+ F ++  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 194 VGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 253

Query: 216 GDTV 219
           G  +
Sbjct: 254 GTGI 257



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 114 SLARVAAGFGLAAVVGIPAGFLLGRFAFLNAMASPVISLLRPVSPLAWLP--IGLLLFKA 171

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA    ++ W+ +R+++ P + PY
Sbjct: 172 ANPAAIWAIFIC--SIWPMIINTAVGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLPY 229

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ + I+
Sbjct: 230 MLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFII 280


>gi|299769519|ref|YP_003731545.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter sp. DR1]
 gi|298699607|gb|ADI90172.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter sp. DR1]
          Length = 279

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      V+A     S+     L P    ++SIP L ++   +++     
Sbjct: 86  STWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ R L EV + +RL+ +Q+   + +P 
Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDRKLIEVGKVYRLNAFQRIISIILPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S+S  W F++A+E+I  
Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 25/179 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV++  II S + +   IW+G      + ++P    + + P+  + PL++      
Sbjct: 85  ISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 138

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL +       L+  G  +    N +A          EV   + +  ++    I
Sbjct: 139 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISI 193

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ILP   P  +TG   +   +W   I +E+ +       T G+G  +++  E  S P++V
Sbjct: 194 ILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 245


>gi|331702032|ref|YP_004398991.1| ABC transporter integral membrane subunit [Lactobacillus buchneri
           NRRL B-30929]
 gi|329129375|gb|AEB73928.1| ABC-type transporter, integral membrane subunit [Lactobacillus
           buchneri NRRL B-30929]
          Length = 283

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 25/177 (14%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           ++T   +L++ +I+L+         AKS+   ++  PILD MQ++P   +L   V +F  
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSKVFAVINKPILDFMQTMPAFVYLIPAVAFF-- 151

Query: 126 LYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              G V G   + IFA+  T ++ N+       +  +P DL E + S+  +GWQK + + 
Sbjct: 152 -GIGMVPGVIASVIFAMPPTVRMTNL------GIRQVPNDLIEAADSYGSTGWQKLFKVQ 204

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +P +    M G+  +MM+S+S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 205 LPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRND 250


>gi|207727822|ref|YP_002256216.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206591063|emb|CAQ56675.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 287

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI+AIF   +W M  +    +  +
Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  +G    +++   P   LL       + P  +  + +  
Sbjct: 98  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G +  P D+  VA   +++ W+ +  ++ P + PY
Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G ++ +         +V+ + ++   
Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 268 GLLLEQAL 275


>gi|152986057|ref|YP_001346556.1| taurine ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961215|gb|ABR83240.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa PA7]
          Length = 272

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + PL+V       
Sbjct: 84  SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L +F     +L    AG         +       + W+  RY+ILP   P 
Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W+  + +E+ +         GLG  +  + +  +   VV+G+L++   
Sbjct: 200 VLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDVVVVGILLIAAV 253

Query: 566 VLALN 570
            LA  
Sbjct: 254 ALAFE 258



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L   
Sbjct: 76  SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG EL+ +  I+ +    +  +    +  + R   +  R    S WQ 
Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Y+ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221


>gi|332666518|ref|YP_004449306.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335332|gb|AEE52433.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 334

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)

Query: 385 ITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           IT  + V V  + AS + +P+G+  G   +I + + P  Q+L       + P+V   VS 
Sbjct: 131 ITSLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSPLAWLPIVTMIVSA 190

Query: 444 YHLNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++  + +LS   I         + W  L N   G ++   D+  VA    ++  +    
Sbjct: 191 VYVTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVAQVLQLSPSQRIFK 250

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFP 553
           +ILP   P   TG     G  W   I +E+ +      +  GLG +I +  + G   S  
Sbjct: 251 VILPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFIWDEFQNGSSDSIA 304

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++ VL +     AL+R +
Sbjct: 305 RIMVAVLTIGLIGYALDRLM 324


>gi|124266117|ref|YP_001020121.1| ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124258892|gb|ABM93886.1| ABC transporter permease protein [Methylibium petroleiphilum PM1]
          Length = 258

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 10/176 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV     +A+ + +P+G+++G+       + P  + L   P   + PL +   S     P
Sbjct: 64  RVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTE-TP 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            ++L+ L  F   +    N + G  +    +   A     + W+ +R +I+PG  PY  T
Sbjct: 123 VIFLTFLASF---FATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMPYIFT 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           G   + G AW + +  E+ S G       GLG  I  S     +P +V+G++ +  
Sbjct: 180 GLQISVGVAWFSLVAGEMVS-GEF-----GLGYVINTSYTMVQYPTIVIGMVTLGA 229



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI + ++ IPIL ++   ++ F         G E   IF  F +  +    +    + +I
Sbjct: 95  PIFETLRPIPILAWVPLAILMFS--------GTETPVIFLTFLASFFATALNTMLGVESI 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
                  +     S WQ F  + VP SMP +   + +S+   WF +VA EM+
Sbjct: 147 DESYSRAAYCLGASKWQVFREVIVPGSMPYIFTGLQISVGVAWFSLVAGEMV 198


>gi|70730546|ref|YP_260287.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344845|gb|AAY92451.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5]
          Length = 254

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 10/168 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G   H+ +   P  Q L       + P+VV  +      P   +  L+ F   W
Sbjct: 84  PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 139

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N  AG       + +++ S   T W   R +ILPG+  + +TG   + G  W   +
Sbjct: 140 PILLNTAAGVRQLDPRWLQLSRSLSATRWETLRKVILPGVLGHVLTGVRLSIGILWIVLV 199

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             E+         + GLG +I ++ ++ ++ E++  VL++     AL+
Sbjct: 200 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGVLGFALD 241


>gi|254241178|ref|ZP_04934500.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192]
 gi|126194556|gb|EAZ58619.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192]
          Length = 283

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 23/203 (11%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
            HSL     R  L  L A+ +++   FV       S  L   L P + +++ I  L ++ 
Sbjct: 93  AHSL----GRVALGYLIALAVAIPLGFVIGM----SPLLYQALNPFIQVLKPISPLAWMP 144

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +    +        + ++A+F IF   +W M  +    +  + +D   V+R+  +S  
Sbjct: 145 IALYTIRD--------SSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPL 196

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +K + + +P + P ++  M +SM   W  +VA+EM++ G       GIG ++        
Sbjct: 197 RKAFCVILPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLS 250

Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260
           L  +++A+L M+GVI +   LLF
Sbjct: 251 LANVIFAVL-MIGVIGMLLDLLF 272



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  +IA  + IP+G  IG  P +   + PF Q+L         PL    ++ Y 
Sbjct: 95  SLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPIS-----PLAWMPIALYT 149

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +   ++ +IF  + W +L N   G +    D+  VA +  ++  R    +ILP   P
Sbjct: 150 IRDSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVILPAAAP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  VL++  
Sbjct: 210 TIITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSLANVIFAVLMIGV 263

Query: 565 FVLALN 570
             + L+
Sbjct: 264 IGMLLD 269


>gi|253730527|ref|ZP_04864692.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253725667|gb|EES94396.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 253

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I+FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|295703658|ref|YP_003596733.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           DSM 319]
 gi|294801317|gb|ADF38383.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium DSM 319]
          Length = 287

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 22/178 (12%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           AS  TL + L++ +ISLLF      L+ +  ++G V+ PILDIMQ++P   +L  +V+ F
Sbjct: 93  ASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPSVLLF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC---NIPRDLEEVSRSFRLSGWQKF 180
                       L  + A+  + ++ M  ++  +L     +P+   E + +F  + WQK 
Sbjct: 153 -----------GLGNVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQKL 201

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + +P ++P       M MSG    ++ S  +VV  +++   G+G+ +  +I   D+
Sbjct: 202 IKVQLPLALP-------MIMSGVNQVIMLSLSMVVISSMVGAGGLGAEVLRSISMLDV 252


>gi|169629549|ref|YP_001703198.1| putative sulfonate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169241516|emb|CAM62544.1| Putative sulfonate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 274

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R+++ + +A++I +P G+ +G         +P  Q L       + P+ V+     
Sbjct: 82  ISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGIG 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               N  +  L+     W IL N  AG  +    +  VA SFH T       +ILP I  
Sbjct: 142 ----NQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRG 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TG   A G AW   + +E+     + +R +GLG  +  + ++ ++ +VV  +L++  
Sbjct: 198 HIQTGIRVALGVAWVVLVPAEM-----LGVR-SGLGYQVLNARDQLAYDQVVAVILVIGI 251

Query: 565 FVLALN 570
              AL+
Sbjct: 252 LGYALD 257


>gi|91774682|ref|YP_544438.1| nitrate transport permease [Methylobacillus flagellatus KT]
 gi|91708669|gb|ABE48597.1| nitrate transport permease [Methylobacillus flagellatus KT]
          Length = 295

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ I++ +  L +L   ++ F          A+ AAI+ IF S +W M  +    +  +
Sbjct: 142 PVIGILRPVSPLAWLPIGLLVFK--------AADPAAIWVIFISAIWPMIINTAVGVSKV 193

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  PF +P ++  + +S+   W  +VA+EM+  G
Sbjct: 194 PQDYMNVARVLNLSEWKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 248



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    IS    P   +L       + P  +  + +  
Sbjct: 108 SLQRVALGFGLAALVGIPLGFVIGRFQFISRMAAPVIGILRPVSPLAWLP--IGLLVFKA 165

Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +P  +W+   +     W ++ N   G S  P D+  VA   +++ W+    I+ P + P
Sbjct: 166 ADPAAIWV---IFISAIWPMIINTAVGVSKVPQDYMNVARVLNLSEWKIITKILFPFVLP 222

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   + G AW   + +E+ + G
Sbjct: 223 YMMTGVRLSIGVAWLVIVAAEMLTGG 248


>gi|149926963|ref|ZP_01915221.1| possible nitrate transport system permease protein [Limnobacter sp.
           MED105]
 gi|149824184|gb|EDM83404.1| possible nitrate transport system permease protein [Limnobacter sp.
           MED105]
          Length = 282

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+V   +A+++ IP+G  IG  P +   + PF Q+L       + PL     + Y 
Sbjct: 94  SIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALDPFIQILKPVSPLAWMPL-----ALYT 148

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +   ++ +IF  + W +L N   G +    D+  VA +  ++  R    +ILP   P
Sbjct: 149 IQDSDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVILPAAAP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   ++  +L +  
Sbjct: 209 TIMTGMRISVGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIANIISAILFIGL 262

Query: 565 FVLALNRFL 573
             + L+  L
Sbjct: 263 IGMLLDTLL 271



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ +AIF IF   +W M  +    +  + RD   V+++  +S  +  + + +P + P ++
Sbjct: 152 SDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVILPAAAPTIM 211

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  I+ A+L +  +  
Sbjct: 212 TGMRISVGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIANIISAILFIGLIGM 265

Query: 254 LYDQLLFR 261
           L D LL R
Sbjct: 266 LLDTLLAR 273


>gi|167034348|ref|YP_001669579.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860836|gb|ABY99243.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 251

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR  S + I ++       L A S     ++ P+   ++ +P+LG++    ++  N  
Sbjct: 59  SLLRTCSGLAIGIVGGVGLGALMALSAPANRLIAPLFHALRQVPMLGWIPLIALWLGNGE 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K++   LAA++         M  + ++SL  +     E ++   LS WQ+ W + +P 
Sbjct: 119 GAKLLIVSLAALYP--------MVLNTFESLRQVTAQHREAAQVLMLSRWQQLWLILLPA 170

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           ++PG+   ++ +++  W   V SE+ +         G+GS +
Sbjct: 171 ALPGIAAGVLQALAFAWVTSVGSELFLSAGA-----GLGSLM 207


>gi|21666014|gb|AAM73542.1|AF283498_2 nitrate transporter integral membrane protein [Azospirillum
           brasilense]
          Length = 363

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY--YHLNPNLWL 452
           ++ +++ +P+G+  G    +++ + P  Q+        + PLV   VS      NP    
Sbjct: 168 LLGALVAVPLGVACGLSRTVNAAMNPLIQIFKPVSPLAWLPLVTMVVSATVSSDNPTFEK 227

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S L     +   + W  L N   G S+   D   V     ++G    R ++LP   PY  
Sbjct: 228 SFLTSAVTVTLCSLWPTLINTAVGVSSIDKDLMNVGKVLQLSGPTMVRRLVLPSALPYIF 287

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 288 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LARIMVAVFTI 339

Query: 568 ALNRFL 573
            L  FL
Sbjct: 340 GLIGFL 345


>gi|224824744|ref|ZP_03697851.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224603237|gb|EEG09413.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 255

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 24/192 (12%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVVV  +  + + +P+G+ +G  P +     P  QLL   P   + PL +       
Sbjct: 62  SLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFNPMLQLLRPIPPIAYIPLAI------- 114

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  L       L+  G  + +L N I+G       +   A +  +     +  ++
Sbjct: 115 ----LWFGLGNPPSVFLIAIGAFFPVLMNTISGVRHVDGIYLRAARNLGVGRLALFTRVM 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY +TG     G A+   IVSE+ +         GLG  I E+ E     +++ G
Sbjct: 171 LPAATPYILTGVRIGIGTAFIVVIVSEMIAV------NDGLGYRILEAREFMWSDKIIAG 224

Query: 559 VLIMCCFVLALN 570
           ++ +    LAL+
Sbjct: 225 MITIGLLGLALD 236


>gi|150005778|ref|YP_001300522.1| glycine betaine/L-proline transport system permease [Bacteroides
           vulgatus ATCC 8482]
 gi|294776156|ref|ZP_06741645.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
 gi|149934202|gb|ABR40900.1| glycine betaine/L-proline transport system permease [Bacteroides
           vulgatus ATCC 8482]
 gi|294449979|gb|EFG18490.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
          Length = 274

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+        +A S+R   +L PILD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P+++ E SRSF  +  Q  + + +P
Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVVEASRSFGATPMQLLFKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   ++MS+S     VV + MI  G 
Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229


>gi|323493097|ref|ZP_08098229.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323312658|gb|EGA65790.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 322

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS- 453
           ++A+ I IP+GI +G          P  QLL       + P+V   VS  +++ +   + 
Sbjct: 124 LLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPLFAK 183

Query: 454 ------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 L +   + W  L N   G ++   D   V+    ++ W+  R I+LP   P   
Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 243

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +DL  VS+  +LS WQ    + +P ++P +   + +S+   W  
Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256

Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229
           ++A+EM+         PG+G ++
Sbjct: 257 LIAAEMLAQN------PGLGKFV 273


>gi|294498309|ref|YP_003562009.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           QM B1551]
 gi|294348246|gb|ADE68575.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium QM B1551]
          Length = 287

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 22/178 (12%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           AS  TL + L++ +ISLLF      L+ +  ++G V+ PILDIMQ++P   +L  +V+ F
Sbjct: 93  ASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPSVLLF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC---NIPRDLEEVSRSFRLSGWQKF 180
                       L  + A+  + ++ M  ++  +L     +P+   E + +F  + WQK 
Sbjct: 153 -----------GLGNVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQKL 201

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + +P ++P       M MSG    ++ S  +VV  +++   G+G+ +  +I   D+
Sbjct: 202 IKVQLPLALP-------MIMSGVNQVIMLSLSMVVISSMVGAGGLGAEVLRSISMLDV 252


>gi|83589331|ref|YP_429340.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83572245|gb|ABC18797.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 262

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 10/176 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ FRV    ++A+ I +P+GI +G    + +  +P        PA+ F PL +  +S +
Sbjct: 69  ISFFRVTTGFLLAAAIGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSIF 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + +  + IF   + ++  V+      P D  + A +        +R +ILP   P
Sbjct: 129 E-TQKIGVVFIGIF---FQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAALP 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             +     A G AW   IV+E+ +       ++GLG  I  +  + S P++ +G+L
Sbjct: 185 GIMDTLRVALGWAWTYVIVAELVA------ASSGLGFLIMNAGRQLSTPDMFVGIL 234


>gi|46203697|ref|ZP_00051132.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 193

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ +++ IP L ++ F +++F  + P        AA+F I     W + F+   ++  + 
Sbjct: 39  IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAVGVFWIVFFATQGAVRGVD 90

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   G W +   + +P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 91  RDLIEVAKAFGFRGAWPRLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 144

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PGIG+ +  A        ++  MLTM  +  L+D
Sbjct: 145 -PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFD 178


>gi|313904100|ref|ZP_07837480.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313471249|gb|EFR66571.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 279

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 24/184 (13%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++  +I+S++ I +GI IG   H         Q+L   P   + PLV+     
Sbjct: 88  AISIRRVLLGYLISSVLGIVLGILIGLSRHAQRLTGLLIQVLRPIPPIAWIPLVI----- 142

Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                 LW+ +       L+  G  + +L NVI G         EVA       +++   
Sbjct: 143 ------LWMGIGENSKVFLIFLGGFFTVLINVIDGIRYTDKKLTEVAWVMETPKFKYITR 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P   TG   A G  W   + +E+ +       T+G+G  I+ +   G    V+
Sbjct: 197 LVIPAALPSIFTGLKVALGSCWTCVVAAELVA------STSGIGYMISNARNFGQMDVVI 250

Query: 557 LGVL 560
           +G+L
Sbjct: 251 VGML 254


>gi|260654834|ref|ZP_05860322.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1]
 gi|260630549|gb|EEX48743.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1]
          Length = 256

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV      A +I +PVG+ +G+       + P+   +   P   + PL    + ++
Sbjct: 59  ITLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPL---SIIWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     +  ++     + IL N I+G      ++K  A       W+  R ++LPG  P
Sbjct: 116 GLGDGPTI-FMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPGALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            ++TG   A G AW + I +E  +       +TG G  + E+  +   P
Sbjct: 175 NFLTGCRLALGSAWMSVICAEFIA------TSTGFGYIMVEAQVRMQTP 217



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 19/206 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+ +    +++       L   SR   + L P ++ ++ +PI+ ++  ++++F  L 
Sbjct: 60  TLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPLSIIWF-GLG 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  I       F I  S V+ +  +    + NI  + +  +R      WQ    + +P 
Sbjct: 119 DGPTI-------FMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPG 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +    +++   W  V+ +E I          G G YI +  + +    +LYA++ 
Sbjct: 172 ALPNFLTGCRLALGSAWMSVICAEFIATST------GFG-YIMVEAQVRMQTPLLYALMI 224

Query: 248 MLGVI-FLYDQ---LLFRPMIVWSNK 269
           M  ++ F  DQ   LL R +  W  K
Sbjct: 225 MSALVGFAIDQSIVLLERCLTGWRYK 250


>gi|13471315|ref|NP_102884.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14022060|dbj|BAB48670.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 259

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 32/235 (13%)

Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLG-CITMFRVVVLIIIASIIWIPVGI 406
           AW ++G  VN     D L ++            WL   IT++RV    ++AS++ +P+GI
Sbjct: 30  AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGGFVLASVVAVPIGI 89

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465
            +G    + + ++PF       PA+ F PL++       L       LL+IF G+ + I+
Sbjct: 90  AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQII 144

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             V     +   D  E A +   T     + +I+P   P          G AW   IV+E
Sbjct: 145 LIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLVLGWAWTYVIVAE 204

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573
           +         ++G+G  I  S  + +  +++ G++++    L       A NR+L
Sbjct: 205 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 253


>gi|317047581|ref|YP_004115229.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949198|gb|ADU68673.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 261

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 93  SRRLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + RLG  L+   + +++++P L  +   +++F      K+    L  +F I+        
Sbjct: 87  TSRLGERLLDTSVQMLRNVPHLALIPLVILWFGIDEAAKIFLVALGTLFPIY-------- 138

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + Y  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W       
Sbjct: 139 LNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFALGLMWL------ 192

Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIV 265
            ++V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + 
Sbjct: 193 TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--AAQLLERVWLR 249

Query: 266 WSNKFRLERTTG 277
           W   ++L+    
Sbjct: 250 WHPAYQLKEANA 261



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  P  + G   A 
Sbjct: 128 LVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFAL 187

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 188 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAA 240

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 241 QLLERVWLRWHPAY 254


>gi|222102562|ref|YP_002539601.1| sulfate ester transporter permease protein [Agrobacterium vitis S4]
 gi|221739163|gb|ACM39896.1| sulfate ester transporter permease protein [Agrobacterium vitis S4]
          Length = 261

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 23/217 (10%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           T  R+I+D        + L      + LR LS   I  +    + TL   ++    +++P
Sbjct: 53  TAKREILD--------NGLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMP 104

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
             + ++ I +L ++    ++F      K++   LAA   I          + +  +  +P
Sbjct: 105 TFNGLKQISLLAWIPLISIWFGFGEQAKIVFVALAAFIPI--------ALNTFDGIRQVP 156

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE-MIVVGDTVIP 221
           RDL EV R+ R S  Q+ + + +P ++P +   + + +   W   V +E  + VG     
Sbjct: 157 RDLIEVGRALRFSPRQRIFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVG----- 211

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            PGIG  +    +  D+  ++  ++ +  V F++++L
Sbjct: 212 -PGIGGLVIAGRERFDMSLVMVGVIILGLVGFIFNRL 247


>gi|307151303|ref|YP_003886687.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306981531|gb|ADN13412.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 265

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 11/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT++RV++  II S++   +G   G+   I   + P  Q L   P+  + PL +  +  Y
Sbjct: 72  ITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSLAWVPLFILWMGIY 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+  G  + +  N+++G  +      EV   + ++ ++  R I  P   P
Sbjct: 132 ETSK----VALIAVGVFFPVYLNLMSGVKSVERKLVEVGKVYRLSNFQLIRRIFFPATLP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            Y  G  +  G  W   + +E+         + GLG  + +    G  P ++L  +++  
Sbjct: 188 AYFVGLRSGLGLGWMFVVAAEIMG------SSQGLGFLLVDGQTTGR-PTIILASILLFA 240

Query: 565 FVLALN 570
            +  L 
Sbjct: 241 LLGKLT 246



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +++ +        L  +   T  R++   +I  +   +   L   S ++   L P+L
Sbjct: 50  PSKVIETIWTLASSGELFHHIGITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLL 109

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +++IP L ++   +++ M +Y       E + +  I     + +  ++   + ++ R 
Sbjct: 110 QSLRNIPSLAWVPLFILW-MGIY-------ETSKVALIAVGVFFPVYLNLMSGVKSVERK 161

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           L EV + +RLS +Q    +  P ++P     +   +  GW FVVA+E++
Sbjct: 162 LVEVGKVYRLSNFQLIRRIFFPATLPAYFVGLRSGLGLGWMFVVAAEIM 210


>gi|192360346|ref|YP_001980534.1| putative nitrate transport system permease [Cellvibrio japonicus
           Ueda107]
 gi|190686511|gb|ACE84189.1| possible nitrate transport system permease protein [Cellvibrio
           japonicus Ueda107]
          Length = 275

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    + N+  D   V+R+  LS  +  + + +P + P ++
Sbjct: 145 SETSAIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVILPAAAPTIL 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G++
Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGLV 256



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+    +A  I IPVG  IG  P +   + P+ Q+L       + PL +  +    
Sbjct: 87  SIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALNPYIQVLRPISPLAWMPLALFIIKDSE 146

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  ++  R    +ILP   P
Sbjct: 147 TS-----AIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVILPAAAP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +TG   + G AW   + +E+   G      TG+G Y+
Sbjct: 202 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234


>gi|254882041|ref|ZP_05254751.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides sp. 4_3_47FAA]
 gi|319640951|ref|ZP_07995659.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_40A]
 gi|254834834|gb|EET15143.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides sp. 4_3_47FAA]
 gi|317387396|gb|EFV68267.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_40A]
          Length = 274

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+        +A S+R   +L PILD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALIVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P+++ E SRSF  +  Q  + + +P
Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVVEASRSFGATPMQLLFKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   ++MS+S     VV + MI  G 
Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229


>gi|163789949|ref|ZP_02184385.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7]
 gi|159874889|gb|EDP68957.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7]
          Length = 249

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 18/178 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+++ I+I+ +I +P+GIWIG        + P   L+   P   F P+ +     Y 
Sbjct: 58  SLYRILMAILISFLIGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLL---YG 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVI----AGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L     +SL++     W I+F +I     G S     + +V    H + W+ + Y++ P 
Sbjct: 115 LGDASKISLVV-----WIIVFQLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPA 169

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           I P  ++G +  C G   AS+      +   +    GLG YI  +     + E+  G+
Sbjct: 170 IIPQIISG-LRVCIGIAIASLF-----FAENYATKYGLGYYIMNAWSVIDYSEMFCGI 221


>gi|73540035|ref|YP_294555.1| nitrate transport permease [Ralstonia eutropha JMP134]
 gi|72117448|gb|AAZ59711.1| Nitrate transport permease [Ralstonia eutropha JMP134]
          Length = 300

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F    P        AAI+AIF   +W M  +    +  +
Sbjct: 145 PVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTAVGVTRV 196

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P+D   V+R   LS W+ F  +  P  +P ++  + +S+   W  +VA+EM+  G  +
Sbjct: 197 PQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGTGI 254



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV     +A++I IP G  +G    +++   P   LL       + P  +
Sbjct: 104 VGWNVLASLARVGAGFGLAALIGIPAGFILGRFAFLNAMASPVISLLRPVSPLAWLP--I 161

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + +   NP    ++ +   + W ++ N   G +  P D+  VA    ++ W+ +  ++
Sbjct: 162 GLLLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVL 219

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            P + PY +TG   + G AW   + +E+ + G      TG+G
Sbjct: 220 FPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIG 255


>gi|115526626|ref|YP_783537.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115520573|gb|ABJ08557.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 279

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  +IA  + IP+G  IG  P ++  + PF Q+L       + PL +  +    
Sbjct: 91  SIARVMIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSG 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILMIGV 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMLLDQIL 268



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+AIF IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++  
Sbjct: 151 LSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTG 210

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FL 254
           M +S+   W  +VA+EM+V G       GIG ++        +  ++ A+L M+GV+  L
Sbjct: 211 MRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAIL-MIGVVGML 263

Query: 255 YDQLLFR 261
            DQ+L R
Sbjct: 264 LDQILAR 270


>gi|266619062|ref|ZP_06111997.1| ABC transporter, permease protein, cysTW family [Clostridium
           hathewayi DSM 13479]
 gi|288869429|gb|EFD01728.1| ABC transporter, permease protein, cysTW family [Clostridium
           hathewayi DSM 13479]
          Length = 255

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +   ++P   L+ + P   F  L +  +   +L+  ++++ L++F     I  N I+G
Sbjct: 85  PFLKDLLEPVMVLVKSVPVASFVILALIWIGSKNLS--VFIAFLVVFPM---IYVNTISG 139

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            ++      E+A  FH++GW+ +RYI  P + PY + GA  + G ++ + I +EV
Sbjct: 140 LNSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFKSGIAAEV 194



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P++ +++S+P+  F+   +++         IG++  ++F  F      +  +    L
Sbjct: 90  LLEPVMVLVKSVPVASFVILALIW---------IGSKNLSVFIAFLVVFPMIYVNTISGL 140

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +    L E++  F +SGW+KF Y+  P  +P L+    +S+   +   +A+E+I V D 
Sbjct: 141 NSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFKSGIAAEVIGVPDH 200

Query: 219 VI 220
            I
Sbjct: 201 SI 202


>gi|261415486|ref|YP_003249169.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371942|gb|ACX74687.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 254

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 18/191 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ ++V     A+++ I +GI  G  P + + ++P ++  A  P NV+ P  ++ +  ++
Sbjct: 63  SLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW-WRYII---LPG 501
           L+     + ++     W I  N  AGA+  P  ++  A+   I  + + WR      LP 
Sbjct: 123 LSS----TFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPS 178

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           IF    +G     G ++    V+E      +    TGLG ++    +   +P +V G+L 
Sbjct: 179 IF----SGLSVGMGLSFIMLTVAE------LFGENTGLGHFVQFYADYSDYPNMVAGILW 228

Query: 562 MCCFVLALNRF 572
               VLA+  F
Sbjct: 229 TGIVVLAIMEF 239


>gi|32470875|ref|NP_863868.1| nitrate transport permease protein [Rhodopirellula baltica SH 1]
 gi|32443020|emb|CAD71541.1| nitrate transport permease protein [Rhodopirellula baltica SH 1]
          Length = 371

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 19/191 (9%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH---------L 446
           +A+I+ +PVG+  G  P  ++ + PF Q+        + PL    + +Y+          
Sbjct: 172 LATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFF 231

Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           N    +S   +   + W  L N   G ++   DF  VA    ++ W+    IILP   P 
Sbjct: 232 NKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPL 291

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIM 562
              G   + G  W   I +++ +      +  GLG ++ +  + GS   +  +   V+++
Sbjct: 292 MFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIAFSVIVI 345

Query: 563 CCFVLALNRFL 573
               L L+R +
Sbjct: 346 GLIGLVLDRIM 356



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 12/137 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTF 152
            + P + I + +  L +L    +  M  Y G   G      A L +   +    +W    
Sbjct: 193 AMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLV 252

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++ +D   V+   RLS WQ+   + +P S+P +   M +S+  GW  ++A++M
Sbjct: 253 NTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADM 312

Query: 213 IVVGDTVIPLPGIGSYI 229
           +         PG+G ++
Sbjct: 313 LAQN------PGLGKFV 323


>gi|221369069|ref|YP_002520165.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221162121|gb|ACM03092.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 296

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)

Query: 69  TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M+S   V +++       LAA+S R+  ++ P+LD+MQ++P   +L   VV F    
Sbjct: 104 TLAMVSVCTVAAVIIGLPIGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIF---G 160

Query: 128 PGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            GKV G     I+A+    ++ N+   +  +      ++ E + +F  S  QK W + +P
Sbjct: 161 IGKVPGMIAVVIYAVPPMIRLTNLGIRLVDA------EVLEAAEAFGSSARQKLWNVQLP 214

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++P    G+   +MMS+S     VV + M+ VG       G+G  +  AI  Q
Sbjct: 215 LALPALMTGINQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 257


>gi|74318291|ref|YP_316031.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259]
 gi|74057786|gb|AAZ98226.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259]
          Length = 299

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ I++ +  L +L   ++            AE A+I+ IF S +W M  +  
Sbjct: 140 LNRMLAPIIGILRPVSPLAWLPIGLLVLQK--------AEPASIWVIFISSIWPMVLNTA 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P+D   V+R  +LS ++ F  +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 192 AGVQRVPQDYMNVARVLKLSEFRVFTRILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTG 251

Query: 216 G 216
           G
Sbjct: 252 G 252



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV V    A+ + IP+G  IG    ++  + P   +L       + P  +  +    
Sbjct: 112 SLYRVGVGFGAAAAVGIPLGFMIGRFDFLNRMLAPIIGILRPVSPLAWLP--IGLLVLQK 169

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P    S+ +IF  + W ++ N  AG    P D+  VA    ++ +R +  I+ P + P
Sbjct: 170 AEP---ASIWVIFISSIWPMVLNTAAGVQRVPQDYMNVARVLKLSEFRVFTRILFPAVLP 226

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   + G AW   + +E+ + G       G+G ++ +     +   +++ + I+  
Sbjct: 227 HVLTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVAHIIIAIFIVGL 280

Query: 565 FVLALNRFL 573
             LAL + L
Sbjct: 281 VGLALEQGL 289


>gi|327542553|gb|EGF29027.1| nitrate ABC transporter permease protein [Rhodopirellula baltica
           WH47]
          Length = 371

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 19/191 (9%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH---------L 446
           +A+I+ +PVG+  G  P  ++ + PF Q+        + PL    + +Y+          
Sbjct: 172 LATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFF 231

Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           N    +S   +   + W  L N   G ++   DF  VA    ++ W+    IILP   P 
Sbjct: 232 NKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPL 291

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIM 562
              G   + G  W   I +++ +      +  GLG ++ +  + GS   +  +   V+++
Sbjct: 292 MFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIAFSVIVI 345

Query: 563 CCFVLALNRFL 573
               L L+R +
Sbjct: 346 GMIGLVLDRIM 356



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 17/181 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTF 152
            + P + I + +  L +L    +  M  Y G   G      A L +   +    +W    
Sbjct: 193 AMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLV 252

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++ +D   V+   RLS WQ+   + +P S+P +   M +S+  GW  ++A++M
Sbjct: 253 NTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADM 312

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLL-----AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +         PG+G ++    +    L     A    ++ M+G++     + FR ++ + 
Sbjct: 313 LAQN------PGLGKFVWDEFQNGSELTYARIAFSVIVIGMIGLVLDRIMIFFRNLVSFG 366

Query: 268 N 268
           N
Sbjct: 367 N 367


>gi|212693216|ref|ZP_03301344.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855]
 gi|237709959|ref|ZP_04540440.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|237725376|ref|ZP_04555857.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. D4]
 gi|265753610|ref|ZP_06088965.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_33FAA]
 gi|212664321|gb|EEB24893.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855]
 gi|229436063|gb|EEO46140.1| glycine betaine/L-proline transport system permease [Bacteroides
           dorei 5_1_36/D4]
 gi|229456052|gb|EEO61773.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|263235324|gb|EEZ20848.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_33FAA]
          Length = 274

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+        +A S+R   +L PILD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P+++ E SRSF  +  Q  + + +P
Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVIEASRSFGATPMQLLFKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            ++P    G+   ++MS+S     VV + MI  G 
Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229


>gi|325122701|gb|ADY82224.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter calcoaceticus PHEA-2]
          Length = 279

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      ++A     S+     L P    ++SIP L ++   +++     
Sbjct: 86  STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ R L EV + +RL+ +Q+   + +P 
Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDRKLIEVGKVYRLNAFQRIISIILPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S+S  W F++A+E+I  
Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225


>gi|239816496|ref|YP_002945406.1| nitrate ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803073|gb|ACS20140.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus S110]
          Length = 309

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 31/240 (12%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDI--FWFCVVCGVA----IGIAWQ------SIG 365
           R  GV R   P     +   Q+    +D+  FW  V+  +A    + + W+      + G
Sbjct: 23  RGEGVPRAEAPSQPAPVAREQKPRTPIDLRAFWMRVLPPLAGFGLLVLIWELVAMKSTTG 82

Query: 366 YIVNHFTYQDVLYVI---------------WLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +     T+Q  L V                W    ++ RV +   +A+ + IP G  IG 
Sbjct: 83  FPSPLATWQQALTVFSDPFYSKGPNDQGVGWNVLSSLQRVALGFGLAAAVGIPAGFAIGR 142

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S    P   LL       + P  +  + +   NP    ++ +   + W ++ N   
Sbjct: 143 FEFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKGANPAAIWTIFIC--SIWPMVINTAV 198

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G    P+D+  VA   +++ W+ +  I+ P + PY +TG   A G AW   + +E+ + G
Sbjct: 199 GVQRVPSDYMNVAKVLNLSEWKIFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 258



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 152 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 203

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P D   V++   LS W+ F  +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 204 PSDYMNVAKVLNLSEWKIFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 258


>gi|254454126|ref|ZP_05067563.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198268532|gb|EDY92802.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 259

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    +  +  D   V+R+  L   +  + + +P + P +V
Sbjct: 129 SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVILPAAAPTIV 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+GV+
Sbjct: 189 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGVV 240



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+    +A+ I IP+G  IG        + PF Q+L       + PL +  +    
Sbjct: 71  SIYRVLTGYFLAAFIAIPLGFLIGMSSVAHKALNPFIQVLRPISPLAWMPLALFIIQDSE 130

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +   +    +ILP   P
Sbjct: 131 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVILPAAAP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             VTG   + G AW   + +E+   G      TG+G Y+
Sbjct: 186 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 218


>gi|317404717|gb|EFV85106.1| NrtB protein [Achromobacter xylosoxidans C54]
          Length = 242

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IPVG  IG    + +   P   LL   P +    L +  + +  
Sbjct: 53  SLQRVGIGFGLAALVGIPVGFAIGRYAPVRAMFSPIVSLLR--PVSPLAWLPLGLLLFKA 110

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G S  P D+  VA   +++ W+    ++LP + PY
Sbjct: 111 ANPAAIWAIFIC--SIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPY 168

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ + ++   
Sbjct: 169 MLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFVIGIV 222

Query: 566 VLALNRFL 573
            L L   L
Sbjct: 223 GLILETLL 230



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A  AAI+AIF   +W M  +    +  +P+D   V+R   LS W+    + +P  +P +
Sbjct: 110 AANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYM 169

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +  + +S+   W  +VA+EM+  G  +
Sbjct: 170 LTGVRLSIGTAWLVIVAAEMLTGGTGI 196


>gi|149201150|ref|ZP_01878125.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149145483|gb|EDM33509.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 356

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 16/198 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449
           +IA+ + +P+GI  G  P  ++ + P  Q+        + P+V   VS  ++  +     
Sbjct: 161 LIATAVAVPLGIAAGLSPTANAALNPLIQIFKPVSPLAWLPIVTMVVSAVYVTQDGLFSR 220

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L  ++ +   + W  L N   G ++   D   V+    +T W     ++LP   P   
Sbjct: 221 SFLTSAITVTLCSLWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLVLPSALPLIF 280

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 281 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS--STSLAKIMVAVFTI 332

Query: 568 ALNRFLWHPLYLYGTRCL 585
            +  FL   L +Y  + L
Sbjct: 333 GIIGFLLDRL-MYAAQSL 349



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I RDL  VSR  +L+ W K   L +P ++P +   + +S+  GW  
Sbjct: 234 LWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLVLPSALPLIFTGLRLSLGVGWMV 293

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D+L++
Sbjct: 294 LIAAEMLAQN------PGLGKFVWDEFQNGSSTSLAKIMVAVFTIGIIGFLLDRLMY 344


>gi|94500530|ref|ZP_01307061.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94427320|gb|EAT12299.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 313

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S +   ++ PILD MQ+ P   +L   V+ F    PGKV G  +  IFA     V  M
Sbjct: 151 SRSDKAVSIVRPILDAMQTTPAFVYLIPIVMLF---SPGKVAGVIVTIIFA-----VPPM 202

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                  +  +P DL E +R+F  S  Q  + + +P ++P ++  +  ++  G   VV +
Sbjct: 203 IRLTNLGIRQVPEDLIEAARAFGTSPKQLLFKVQLPLALPTIMAGVNQTLMLGLSMVVIA 262

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            MI V       PG+G  +   I   D   I  A +  LG++ L
Sbjct: 263 SMIAV-------PGLGLMVLQGIGRND---IGIATVGGLGIVIL 296


>gi|302327398|gb|ADL26599.1| ABC transporter, permease protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 250

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 18/191 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ ++V     A+++ I +GI  G  P + + ++P ++  A  P NV+ P  ++ +  ++
Sbjct: 59  SLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW-WRYII---LPG 501
           L+     + ++     W I  N  AGA+  P  ++  A+   I  + + WR      LP 
Sbjct: 119 LSS----TFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPS 174

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           IF    +G     G ++    V+E      +    TGLG ++    +   +P +V G+L 
Sbjct: 175 IF----SGLSVGMGLSFIMLTVAE------LFGENTGLGHFVQFYADYSDYPNMVAGILW 224

Query: 562 MCCFVLALNRF 572
               VLA+  F
Sbjct: 225 TGIVVLAIMEF 235


>gi|77465073|ref|YP_354576.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126464525|ref|YP_001045638.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332560670|ref|ZP_08414988.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|77389491|gb|ABA80675.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126106336|gb|ABN78866.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332274468|gb|EGJ19784.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 303

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)

Query: 69  TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M+S   V +++       LAA+S R+  ++ P+LD+MQ++P   +L   VV F    
Sbjct: 111 TLAMVSVCTVAAVIIGLPIGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIF---G 167

Query: 128 PGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            GKV G     I+A+    ++ N+   +  +      ++ E + +F  S  QK W + +P
Sbjct: 168 IGKVPGMIAVVIYAVPPMIRLTNLGIRLVDA------EVLEAAEAFGSSARQKLWNVQLP 221

Query: 187 FSMPGLV----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++P L+      +MMS+S     VV + M+ VG       G+G  +  AI  Q
Sbjct: 222 LALPALMTGVNQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 264


>gi|119898684|ref|YP_933897.1| putative sulfonate transport system permease [Azoarcus sp. BH72]
 gi|119671097|emb|CAL95010.1| putative sulfonate transport system, permease protein [Azoarcus sp.
           BH72]
          Length = 270

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 24/214 (11%)

Query: 361 WQSIGYIVNH------FTYQDVLYVIW-----LGCITMFRVVVLII---IASIIWIPVGI 406
           WQ+IG  +             VL  +W     LG  T+   ++LI     A ++ + +G+
Sbjct: 42  WQAIGSALAGSGNPLLPPPLTVLQALWDSLPELGRGTVSSFLILIPGFGTALVLGVALGL 101

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
             G  P ++    PFA++ A  P  V+ P  ++ +  +HL+     + ++  G  W I  
Sbjct: 102 AAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAVLPTFHLS----ATFVVFVGAFWPIFQ 157

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AGA A     ++ A       +   R +I P   P+  +G     G ++    V+E+
Sbjct: 158 NAAAGALAVEGRHRDNARVLGFGRFETLRKVIFPAALPHIFSGMAVGLGFSFILLTVAEL 217

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                      GLG ++    +   +P +V G+L
Sbjct: 218 FG------ANAGLGRFVQYYADFADYPRMVAGIL 245


>gi|322832872|ref|YP_004212899.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168073|gb|ADW73772.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 293

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 21/203 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RV+   I+A  I +P+GI +G    I +  +PF       PA+ F PL++      
Sbjct: 102 MTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAGIG 161

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I   V     A   D  E A +   T     R +I+PG  
Sbjct: 162 EMQ-----KVLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVIIPGAA 216

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I  S    +  +++ G++++ 
Sbjct: 217 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGIIVIG 270

Query: 564 CFVL-------ALNR--FLWHPL 577
           C  L       A NR  F+W  L
Sbjct: 271 CIGLLSDLLFKAANRRLFVWSSL 293


>gi|171060512|ref|YP_001792861.1| nitrate ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777957|gb|ACB36096.1| nitrate ABC transporter, inner membrane subunit [Leptothrix
           cholodnii SP-6]
          Length = 331

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    ++  + P   LL       + P  +  + +  
Sbjct: 144 SLQRVAMGFGLAALVGIPLGFMIGRFNFLNQMLDPLISLLRPVSPLAWLP--IGLMVFQA 201

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA    ++ W   R I+ P + PY
Sbjct: 202 ANPAAIWTIFIC--SIWPMVINTAVGVRQVPQDYLNVARVLELSEWTVMRKILFPAVLPY 259

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ + ++   
Sbjct: 260 MLTGVRLAVGTAWLVIVAAEMLTGGQ------GIGFWLWDEWNNLNVAHILIAIFVIGGV 313

Query: 566 VLALNRFL 573
            LAL   L
Sbjct: 314 GLALEALL 321



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L P++ +++ +  L +L   ++ F    P        AAI+ IF   +W M  +  
Sbjct: 172 LNQMLDPLISLLRPVSPLAWLPIGLMVFQAANP--------AAIWTIFICSIWPMVINTA 223

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P+D   V+R   LS W     +  P  +P ++  + +++   W  +VA+EM+  
Sbjct: 224 VGVRQVPQDYLNVARVLELSEWTVMRKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTG 283

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G       GIG ++       ++  IL A+  + GV    + LL 
Sbjct: 284 GQ------GIGFWLWDEWNNLNVAHILIAIFVIGGVGLALEALLM 322


>gi|29347160|ref|NP_810663.1| glycine betaine/L-proline transport system permease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253571897|ref|ZP_04849302.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 1_1_6]
 gi|298387517|ref|ZP_06997069.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 1_1_14]
 gi|29339059|gb|AAO76857.1| glycine betaine/L-proline transport system permease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251838494|gb|EES66580.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 1_1_6]
 gi|298259724|gb|EFI02596.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 1_1_14]
          Length = 276

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++LL         A S R   ++ P+LD MQ++P   +L   V++
Sbjct: 83  EETMQTLALVLSSTCLALLLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLF 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V GA    IFA+    V  +T      +  +P+++ E SRSF  + WQ  + 
Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATPWQLLYK 194

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +P ++P    G+   +MMS+S     VV + MI  G
Sbjct: 195 VQLPLALPTILTGINQTIMMSLS----MVVIAAMISAG 228


>gi|288962927|ref|YP_003453221.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288915193|dbj|BAI76677.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 277

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVV+   I + + +P+G+ +G  P I +   P  Q+L   P   + PL    + ++ 
Sbjct: 84  SLYRVVLGFAIGAGLALPLGLAMGGNPRIHALFDPLMQVLRPIPPIAYIPL---AILWFG 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A +        +  +ILP   PY
Sbjct: 141 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGKLTMFLRVILPAATPY 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + GA    G A+   IVSE+ +        +GLG  I E+ E     +++ G+  +   
Sbjct: 200 ILAGARIGIGTAFIVVIVSEMIA------VNSGLGFRILEAREFMWSDKIIAGMFTIGLL 253

Query: 566 VLALN 570
            LA++
Sbjct: 254 GLAID 258


>gi|166364630|ref|YP_001656903.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
 gi|166087003|dbj|BAG01711.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
          Length = 271

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR++    +  LF      L      +  ++ PI+ +++ +P   F+   V+Y       
Sbjct: 82  LRVVGGFFLGGLFAIPLGILMGTFPSIRSLMEPIIGVVRYMPAPAFIPLLVIYLG----- 136

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             IG E + I  IF   ++  T  +  ++  IPR+L EV+ +   +  Q  + +  P+ +
Sbjct: 137 --IG-ETSKIMLIFIGTIFFNTLMIMDAVKFIPRELIEVTYTLGGTRKQVLFKVITPYII 193

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++    ++M+  W  VV +E++   +      G+G  I LA K      I +A L +L
Sbjct: 194 PNVIDTFRVNMAAAWNLVVVAELVAADN------GLGKRILLAQKFLRTDEI-FACLIVL 246

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLER 274
           G+I     L FR  + W+ K+ + R
Sbjct: 247 GIIGFALDLSFRLFLQWTCKWSITR 271



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 20/184 (10%)

Query: 362 QSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           Q++G +    F  QD +        +  RVV    +  +  IP+GI +G  P I S ++P
Sbjct: 62  QALGKLAEQGFLIQDTIT-------SFLRVVGGFFLGGLFAIPLGILMGTFPSIRSLMEP 114

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDF 479
              ++   PA  F PL+V      +L       +++IF GT ++    ++      P + 
Sbjct: 115 IIGVVRYMPAPAFIPLLV-----IYLGIGETSKIMLIFIGTIFFNTLMIMDAVKFIPREL 169

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            EV  +   T  +    +I P I P  +         AWN  +V+E+ +  +      GL
Sbjct: 170 IEVTYTLGGTRKQVLFKVITPYIIPNVIDTFRVNMAAAWNLVVVAELVAADN------GL 223

Query: 540 GAYI 543
           G  I
Sbjct: 224 GKRI 227


>gi|257065395|ref|YP_003145067.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256793048|gb|ACV23718.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 253

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 14/172 (8%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +II  ++ + +GI +G        I P    ++  PA +  P  +      H+ P+ + +
Sbjct: 71  LIIGCLVALGLGIPMGLYGRFRKTIYPLIYAISVIPAILLSPFAL------HMMPSFFSA 124

Query: 454 --LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+++G+ W  LF+ + G       + + A +  +TG++   ++ILP   P  ++G +
Sbjct: 125 SIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPSIMSGMV 184

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           T+  GA+     +E+  +G  +    G+G ++  + + G F  +  G + M 
Sbjct: 185 TSLRGAFLMLCFAEM--YGSQY----GMGYFVKRNADMGLFDNMWAGFIFMT 230



 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 41/76 (53%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+IF I    +W   FS    +  I +   + + + +L+G+++  ++ +P +MP ++  M
Sbjct: 124 ASIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPSIMSGM 183

Query: 197 MMSMSGGWFFVVASEM 212
           + S+ G +  +  +EM
Sbjct: 184 VTSLRGAFLMLCFAEM 199


>gi|194290581|ref|YP_002006488.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193224416|emb|CAQ70427.1| putative ABC-type transporter, membrane component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 288

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 12/184 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++A++I +P+GI++G      +  +PF       PA+ F PL++      
Sbjct: 96  MTVWRVVGGFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 155

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I+  V         D  E A +         R +++PG  
Sbjct: 156 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAA 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 211 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 264

Query: 564 CFVL 567
           C  L
Sbjct: 265 CIGL 268


>gi|325122146|gb|ADY81669.1| nitrate ABC transporter, permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 284

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 24/239 (10%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW----LGCI------ 385
            N  ++++  +FW  +  G+A       I    N  T  DV++ +W    L         
Sbjct: 31  KNYAIAFISIVFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVES 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF---- 146

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             P+   S++ I   G  + IL N + G  A    F   A S   +       +I+PG  
Sbjct: 147 --PSSEASMIFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 46/250 (18%), Positives = 106/250 (42%), Gaps = 23/250 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  F + +GI+N           P D++  +     + +  ++   +  R++   V++ 
Sbjct: 49  GLAQFKINLGIVNF-----SNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAA 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       LA + ++L   L+P L++++ IP + ++   ++ F +        +E + IF
Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F   ++ +  +    +  +       ++S   S       + +P ++P ++  + + M
Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGM 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              WF +V +EMI          GIG +   +   Q+   I+  M+ ++G + ++   L 
Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268

Query: 261 RPMIVWSNKF 270
           R   V  N+F
Sbjct: 269 R---VIGNRF 275


>gi|296112268|ref|YP_003626206.1| nitrate ABC transporter permease protein NrtB [Moraxella
           catarrhalis RH4]
 gi|295919962|gb|ADG60313.1| nitrate ABC transporter permease protein NrtB [Moraxella
           catarrhalis RH4]
 gi|326560738|gb|EGE11106.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 46P47B1]
 gi|326561778|gb|EGE12113.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 7169]
 gi|326562282|gb|EGE12608.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 103P14B1]
 gi|326564740|gb|EGE14953.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 12P80B1]
 gi|326568997|gb|EGE19066.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC1]
 gi|326569297|gb|EGE19358.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC7]
 gi|326574534|gb|EGE24475.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis CO72]
 gi|326575485|gb|EGE25410.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 101P30B1]
 gi|326577899|gb|EGE27763.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis O35E]
          Length = 294

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++   +A I+ IP+G  IG  P + S   PF Q+L         PL    ++ Y +  
Sbjct: 109 RVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPIS-----PLAWMPIALYTIKD 163

Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           +   S+ +IF  + W +L N   G ++   +++ VA +  ++  +    I++P   P  V
Sbjct: 164 SNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIV 223

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   + +E+   G      TG+G ++       S   V+  VL++    +
Sbjct: 224 TGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAVLLIGLMGM 277

Query: 568 ALN 570
            L+
Sbjct: 278 ILD 280



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 15/168 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  LG    P + I++ I  L ++   +    +        +  ++IF IF   +W M  
Sbjct: 131 SPVLGSAATPFVQILKPISPLAWMPIALYTIKD--------SNASSIFVIFICSIWPMLT 182

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++ R+   V+++  LS  +    + +P + P +V  M +SM   W  +VA+EM
Sbjct: 183 NTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEM 242

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +V G       GIG ++        L  +++A+L ++G++ +   +LF
Sbjct: 243 LVGGT------GIGYFVWNQWNNLSLANVIFAVL-LIGLMGMILDMLF 283


>gi|326571973|gb|EGE21978.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC8]
          Length = 294

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++   +A I+ IP+G  IG  P + S   PF Q+L         PL    ++ Y +  
Sbjct: 109 RVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPIS-----PLAWMPIALYTIKD 163

Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           +   S+ +IF  + W +L N   G ++   +++ VA +  ++  +    I++P   P  V
Sbjct: 164 SNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIV 223

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G AW   + +E+   G      TG+G ++       S   V+  VL++    +
Sbjct: 224 TGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAVLLIGLMGM 277

Query: 568 ALN 570
            L+
Sbjct: 278 ILD 280



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 15/168 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  LG    P + I++ I  L ++   +    +        +  ++IF IF   +W M  
Sbjct: 131 SPVLGSAATPFVQILKPISPLAWMPIALYTIKD--------SNASSIFVIFICSIWPMLT 182

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++ R+   V+++  LS  +    + +P + P +V  M +SM   W  +VA+EM
Sbjct: 183 NTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEM 242

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +V G       GIG ++        L  +++A+L ++G++ +   +LF
Sbjct: 243 LVGGT------GIGYFVWNQWNNLSLANVIFAVL-LIGLMGMILDMLF 283


>gi|260459647|ref|ZP_05807901.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034449|gb|EEW35706.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 257

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 32/235 (13%)

Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLGC-ITMFRVVVLIIIASIIWIPVGI 406
           AW ++G  VN     D L ++            WL   IT++RV    ++AS++ +P+GI
Sbjct: 28  AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGGFVLASVVAVPIGI 87

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465
            +G    + + ++PF       PA+ F PL++       L       LL+IF G+ + I+
Sbjct: 88  AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQII 142

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             +     +   D  E A +   T     + +I+P   P          G AW   IV+E
Sbjct: 143 LIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLVLGWAWTYVIVAE 202

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573
           +         ++G+G  I  S  + +  +++ G++++    L       A NR+L
Sbjct: 203 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 251


>gi|240137626|ref|YP_002962097.1| nitrate transport system permease protein [Methylobacterium
           extorquens AM1]
 gi|240007594|gb|ACS38820.1| nitrate transport system permease protein [Methylobacterium
           extorquens AM1]
          Length = 284

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ IPVG  IG  P +S  + P+ Q+L       + PL +  +    
Sbjct: 96  SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 155

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N + G +    ++  VA +  ++  R    +ILP   P
Sbjct: 156 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVILPAAAP 210

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 211 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 264

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 265 VGMVLDQLL 273



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + +P + P ++
Sbjct: 154 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVILPAAAPTIL 213

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ ++L +  V  
Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 267

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 268 VLDQLLAR 275


>gi|227328482|ref|ZP_03832506.1| putative sulfate ester transporter, permease component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 568

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ S ++  +L   +   L   SRR   +L P +  +  IP LG++   +V F     G 
Sbjct: 120 RLASGLLAGVLAGTLLGALMGTSRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GI 174

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G +LA I     + +  MT      + N P  L+EV+R+ RL   Q+   L +P ++P
Sbjct: 175 DDGLKLAVII---KAVIIPMTLHTQTGVRNAPHALQEVARTLRLPWHQRLIKLTLPAALP 231

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
             +  + +++S  W  ++  E++
Sbjct: 232 TWLTGLRLALSQAWVSLIVVELL 254


>gi|330953436|gb|EGH53696.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 281

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 69  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 120

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 121 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 172

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + + LS ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 173 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 226

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 227 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLANLEKRFLAWRDTFNGQSREG 281



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 83  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 135

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   + ++ +R  R I+
Sbjct: 136 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 191

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 192 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 244

Query: 559 VLIMCC 564
            +I+  
Sbjct: 245 AIIVLA 250


>gi|294495023|ref|YP_003541516.1| binding-protein-dependent transporters inner membrane component
           [Methanohalophilus mahii DSM 5219]
 gi|292666022|gb|ADE35871.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalophilus mahii DSM 5219]
          Length = 276

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 25/181 (13%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +Y+  T   ++S+  ++L+       LAAKS  L  +L PILD+MQ++P   +L   V++
Sbjct: 89  EYSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAVIF 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F +   PG +     A +       +   T  + Q    +P +L EV+ +F  + WQK  
Sbjct: 149 FGLGNVPGMI-----ATVVFSMPPAIRLTTLGITQ----VPTELVEVADAFGSTSWQKLI 199

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +    M G+   +M+++S          M+V+  ++I   G+G  + + I+  D
Sbjct: 200 KVEIPVALKTIMAGVNQCIMLALS----------MVVIA-SMIGARGLGYQVLIGIQRVD 248

Query: 238 L 238
           +
Sbjct: 249 I 249


>gi|199597436|ref|ZP_03210866.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus rhamnosus
           HN001]
 gi|258509142|ref|YP_003171893.1| ABC transporter binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus GG]
 gi|199591696|gb|EDY99772.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus rhamnosus
           HN001]
 gi|257149069|emb|CAR88042.1| ABC transporter, binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus GG]
 gi|259650429|dbj|BAI42591.1| glycine/betaine/carnitine ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 283

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+ +  ++ P++D MQ++P   +L   V +F +
Sbjct: 98  TQTLTLVLTASLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGI 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  + WQ+   +
Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKV 207

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S           +VV  ++I   G+G+ +  A+   D
Sbjct: 208 QLPFARGTIMAGINQSMMLALS-----------MVVIASMIGAMGLGTKVYFAVGRND 254


>gi|288935851|ref|YP_003439910.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288890560|gb|ADC58878.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 522

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  IP LG++   +V F     G   G +LA I     + V  MT +  Q++ ++
Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMTINTQQAVASV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P+ L E SR    S WQ+  +L +P S+PG    + +++S  W  ++  E++   + +
Sbjct: 158 PQTLSEASRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R G +  P L++++ I +  +L     +  N   GK++   LA+ F +F        FS 
Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            Q++      L+EV+R  RL  + +   + +P + PG+   + +++   W   + +E  +
Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                    GIGS +  A +  D+  IL  M+
Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493


>gi|163761182|ref|ZP_02168258.1| nitrate ABC transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
 gi|162281521|gb|EDQ31816.1| nitrate ABC transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
          Length = 277

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 15/190 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+LS   ++ L       L   S      L P + +++ I  L ++   +    +     
Sbjct: 92  RVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQD----- 146

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +E +AIF IF   +W M  +    +  + +D   V+++  L   +  + + +P + P
Sbjct: 147 ---SERSAIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVILPAAAP 203

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIG 256

Query: 251 VIFLYDQLLF 260
           V+ +    +F
Sbjct: 257 VVGMALDAMF 266



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+    +A+++ IP+G  IG        + PF Q+L       + PL +  +    
Sbjct: 89  SIYRVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQDSE 148

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +   R    +ILP   P
Sbjct: 149 RS-----AIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVILPAAAP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             VTG   + G AW   + +E+   G      TG+G Y+           V+  +L++  
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLTSVIFSILMIGV 257

Query: 565 FVLALN 570
             +AL+
Sbjct: 258 VGMALD 263


>gi|300716105|ref|YP_003740908.1| Aliphatic sulfonates transport permease [Erwinia billingiae Eb661]
 gi|299061941|emb|CAX59057.1| Aliphatic sulfonates transport permease protein [Erwinia billingiae
           Eb661]
          Length = 263

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%)

Query: 95  RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   + +++++P L  +   +++F      K+    L  +F I+         +
Sbjct: 91  RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTMFPIY--------LN 142

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        +
Sbjct: 143 TYHGIRNIDRGLVEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TL 196

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W 
Sbjct: 197 IVAETISASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253

Query: 268 NKFRLERTTG 277
             ++L+    
Sbjct: 254 PAYQLKEDNA 263



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTMFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S       ++G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 190 GLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERVWLRWHPAY 256


>gi|33867016|ref|NP_898575.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102]
 gi|33639617|emb|CAE09001.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102]
          Length = 259

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   +A ++ IPVG+++G    + S + P+ QLL       + P     +  +
Sbjct: 71  ISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLP-----IGLF 125

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               +    + +IF T  W  L N   G  +  +D  +VA S   +       +ILP + 
Sbjct: 126 VFRNSEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVILPAVM 185

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           P  + G   + G AW   + +E+       L  TG+G +I
Sbjct: 186 PNILAGMRISMGTAWLVIVAAEM-------LLGTGIGYFI 218



 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L    ++++           S+ +   + P + +++ +  L +L   +  F N     
Sbjct: 75  RVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLPIGLFVFRN----- 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +E+  IF IF + +W    +    + ++  D+ +V++S   S       + +P  MP
Sbjct: 130 ---SEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVILPAVMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIV 214
            ++  M +SM   W  +VA+EM++
Sbjct: 187 NILAGMRISMGTAWLVIVAAEMLL 210


>gi|312141398|ref|YP_004008734.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311890737|emb|CBH50056.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 271

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M+R++V + IA++I IP+G+ IG  P +   ++P  Q L       + P+ V+    
Sbjct: 68  AASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIAVALFGI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            H  P  +   L+     W I+ N  AG  A       VA S   T       ++LP I 
Sbjct: 128 GH-RPVFF---LIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAVVLPAIR 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  TG   A G AW   + +E+          +GLG  I  + ++ ++ +V+  +L++ 
Sbjct: 184 GHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMAVILVIG 237

Query: 564 CF 565
             
Sbjct: 238 LL 239


>gi|229553043|ref|ZP_04441768.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258540345|ref|YP_003174844.1| ABC transporter binding-protein-dependent transporter permease
           [Lactobacillus rhamnosus Lc 705]
 gi|229313540|gb|EEN79513.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257152021|emb|CAR90993.1| ABC transporter, binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus Lc 705]
          Length = 283

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L+A +++++        AA+S+ +  ++ P++D MQ++P   +L   V +F +
Sbjct: 98  TQTLTLVLTASLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGI 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+        T  M Q  +  +P DL E + +F  + WQ+   +
Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKV 207

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +PF+    M G+  +MM+++S           +VV  ++I   G+G+ +  A+   D
Sbjct: 208 QLPFARGTIMAGINQSMMLALS-----------MVVIASMIGAMGLGTKVYFAVGRND 254


>gi|114320857|ref|YP_742540.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227251|gb|ABI57050.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 311

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ I++ +  L +L   ++ F  + P        +AIF IF + +W +  +    +  I
Sbjct: 156 PLIQILRPVSPLAWLPIGLLLFRAVDP--------SAIFVIFITSIWPIILNTSAGVQAI 207

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           PRD   VSR  +L+  +    + +P ++P ++  M +S+   W  +VA+EM+  G
Sbjct: 208 PRDYMNVSRVLQLNRLEITRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGG 262



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 12/191 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV+    +A ++ IPVG+ +G          P  Q+L       + P  +  
Sbjct: 117 WQVTYSLGRVLGGFFLALLVGIPVGLMMGTSEVCRRAWGPLIQILRPVSPLAWLP--IGL 174

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +  ++P+   ++ +IF T  W I+ N  AG  A P D+  V+    +      R I+L
Sbjct: 175 LLFRAVDPS---AIFVIFITSIWPIILNTSAGVQAIPRDYMNVSRVLQLNRLEITRKILL 231

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P+ +TG   + G AW   + +E+ + G       G+G ++ +     +   +++ +
Sbjct: 232 PAALPHMLTGMRLSLGIAWMVIVAAEMLTGG------IGIGFFVWDEWNNLNVASILVAI 285

Query: 560 LIMCCFVLALN 570
           L++    +AL+
Sbjct: 286 LVIGLVGIALD 296


>gi|332968035|gb|EGK07122.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Desmospora sp. 8437]
          Length = 279

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + ++ T   +L+A +IS++        AA+S+ +  +L P+LD MQ++P   +L    V+
Sbjct: 87  EKSTETLSLVLTASLISVILGIPLGIWAARSQTVRKILTPVLDFMQTMPAFVYL-IPAVF 145

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F  L  G V G   + IFA+  T ++ N+       +  +P DL E + +F  + WQK  
Sbjct: 146 FFAL--GAVPGVIASVIFAMPPTIRLTNL------GIRQVPGDLIEAADAFGSTSWQKLV 197

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +P +    M G+   +M+S+S     VV S MI  G
Sbjct: 198 KVQLPLARTTIMAGVNQTIMLSLS----MVVISSMIGAG 232


>gi|89055532|ref|YP_510983.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88865081|gb|ABD55958.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 356

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 19/197 (9%)

Query: 77  VISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNL 126
           + ++ F F+ AT+        A  S      L PI+ I + +  L +L     VV  +  
Sbjct: 154 ITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALAA 213

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G    + + +   +    +W    +    + +I +DL  VS+  ++  W K   L +P
Sbjct: 214 DDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVLP 273

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILY 243
            ++P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ 
Sbjct: 274 SALPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMV 327

Query: 244 AMLTMLGVIFLYDQLLF 260
           A+LT+  + FL D+L+F
Sbjct: 328 AVLTIGLIGFLLDRLMF 344



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 19/216 (8%)

Query: 368 VNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  FT     Y  IW    T+F      ++A+++ +P+GI  G     ++ + P  Q+  
Sbjct: 137 IRDFTGAPTYYQQIWTSITTVF---FGFLLATVVAVPLGIAAGLSATANAALNPIIQIFK 193

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG------TQWYILFNVIAGASAFPNDFK 480
                 + P+V   VS    +  L+    M+        + W  L N   G ++   D  
Sbjct: 194 PVSPLAWLPIVSIVVSALAADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLV 253

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  W   + ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 254 NVSKVLKMGTWTKIQKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 307

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S  ++++ VL +      L+R +
Sbjct: 308 KFVWDEFQNGSSQSLAKIMVAVLTIGLIGFLLDRLM 343


>gi|325924365|ref|ZP_08185905.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas gardneri ATCC 19865]
 gi|325545152|gb|EGD16466.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas gardneri ATCC 19865]
          Length = 490

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 13/171 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA----T 88
            + L    E  V    + + P + +  SL +   R T   L+ + ISL F  V A     
Sbjct: 258 QVKLERQSEAAVAAQWLGVTPAS-EADSLIKRLLRHTREHLALVGISLGFALVIALPLGV 316

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LAA+  RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   + 
Sbjct: 317 LAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLL 368

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            +  + +  L +IPR+L + +++  L  W + W + +P +   +V  +  +
Sbjct: 369 PIVRNTHAGLTSIPRELRQTAQAIWLPAWTRLWRVELPLARRTIVAGIQTA 419


>gi|260432057|ref|ZP_05786028.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415885|gb|EEX09144.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
          Length = 360

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453
           +IA++I +P+GI  G  P  ++ + P  Q+        + P+V   VS  Y  N  L+  
Sbjct: 165 LIATVIAVPLGIAAGLSPTANAALNPLIQVFKPVSPLAWLPIVTMIVSAVYVTNDGLFAK 224

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G ++   D   V+    +  W     ++LP   P   
Sbjct: 225 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 322



 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW  
Sbjct: 238 LWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D++++
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLARIMVAVFTIGIIGFLLDRVMY 348


>gi|120611631|ref|YP_971309.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120590095|gb|ABM33535.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 289

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 19/197 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A+++ +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 98  MTVWRVLGGFVLAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 157

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + I+  V         D  E A +   T     R +++PG  
Sbjct: 158 ELQ-----KLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATPTGIVRRVLIPGAA 212

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 213 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 266

Query: 564 CFVL-------ALNRFL 573
              L       ALNR L
Sbjct: 267 LIGLVSDFLFKALNRRL 283


>gi|253998066|ref|YP_003050129.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp.
           SIP3-4]
 gi|253984745|gb|ACT49602.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp.
           SIP3-4]
          Length = 305

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ I++ +  L +L   ++ F    P        AAI+ IF S +W M  +    +  +
Sbjct: 152 PIIGILRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTAVGVSKV 203

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V++   LS W+    +  PF +P ++  + +S+   W  +VA+EM+  G
Sbjct: 204 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 258



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A++I IP+G  IG    +S    P   +L       + P  +  + +  
Sbjct: 118 SLERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLP--IGLLVFKA 175

Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP  +W+   +     W ++ N   G S  P D+  VA   +++ W+    I+ P + P
Sbjct: 176 ANPAAIWV---IFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLP 232

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   + G AW   + +E+ + G
Sbjct: 233 YMMTGVRLSIGVAWLVIVAAEMLTGG 258


>gi|86749177|ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
 gi|86572205|gb|ABD06762.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
          Length = 279

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  +IA  + IP+G  IG  P ++  + PF Q+L       + PL +  +    
Sbjct: 91  SIARVAIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILLIGV 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMLLDQIL 268



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++
Sbjct: 149 SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        ++ ++ A+L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILLIGVVGM 262

Query: 254 LYDQLLFR 261
           L DQ+L R
Sbjct: 263 LLDQILAR 270


>gi|259910017|ref|YP_002650373.1| taurine transporter subunit [Erwinia pyrifoliae Ep1/96]
 gi|224965639|emb|CAX57171.1| Taurine ABC transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283480113|emb|CAY76029.1| Taurine transport permease protein tauC [Erwinia pyrifoliae DSM
           12163]
          Length = 275

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 13/197 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG           A S   + W+   +++LPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKNAQQVRLRAARSLGASRWQVLWFVVLPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250

Query: 564 CFVLALN---RFLWHPL 577
               AL    R L H L
Sbjct: 251 LIAFALELALRALQHRL 267



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ +++       L   +  L  +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + N  +     +RS   S WQ  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220


>gi|158422309|ref|YP_001523601.1| nitrate transporter component [Azorhizobium caulinodans ORS 571]
 gi|158329198|dbj|BAF86683.1| nitrate transporter component [Azorhizobium caulinodans ORS 571]
          Length = 302

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 6/123 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +AIF IF + +W +  +    + NIP+D   V++  RL+  + FW + +P + P +   +
Sbjct: 172 SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGL 231

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +   W  +VA+EM+  G       GIG +I  A     L  I+ A++ +  V F+ D
Sbjct: 232 RIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLD 285

Query: 257 QLL 259
           +L+
Sbjct: 286 RLV 288



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 443 YYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +   NP+   ++ +IF T  W I+ N   G    P D++ VA    +    ++  I+LP 
Sbjct: 166 FRDSNPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPS 222

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             PY  TG     G +W A + +E+ + G       G+G +I ++      P++++ ++ 
Sbjct: 223 AAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALVY 276

Query: 562 MCCFVLALNRFL 573
           +      L+R +
Sbjct: 277 IGVVGFVLDRLV 288


>gi|182416893|ref|ZP_02948277.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum 5521]
 gi|237667160|ref|ZP_04527144.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379191|gb|EDT76692.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum 5521]
 gi|237655508|gb|EEP53064.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 256

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 12/175 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+   +IA I+ + +GI IG    +    +   Q+L   P   + PL    + ++ +  
Sbjct: 71  RVLEGFVIALILALILGIGIGLSKKLEIFTEITFQILKPIPPIAWIPL---AIIWFGIGE 127

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  +  +++ G  + IL NVI G       + E+   + +   ++ + +ILPG  PY +T
Sbjct: 128 SSKI-FIIVLGAFFPILLNVIDGIKNIDPKYLELEKVYEVKKIKFIKGVILPGALPYIMT 186

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-VVLGVLIM 562
           G     G AW   + +E+ +       T G+G Y+       S P+ V+LG+LI+
Sbjct: 187 GIRVGLGNAWVCVVAAEMIA------ATKGVG-YMLTDGRNLSRPDLVILGMLII 234


>gi|146278861|ref|YP_001169020.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145557102|gb|ABP71715.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 303

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVW 148
           AA+S R+  V+ P+LD+MQ++P   +L   VV F     GKV G     I+A+    ++ 
Sbjct: 133 AARSDRMQRVINPVLDVMQTLPSFVYLIPVVVIF---GIGKVPGMIAVVIYAVPPMIRLT 189

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   +  +       + E + +F  SG QK W + +P ++P L+  +  ++      VV
Sbjct: 190 NLGIRLVDA------QVLEAAEAFGSSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVV 243

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + M+ VG       G+G  +  AI  Q
Sbjct: 244 VASMVGVG-------GLGKNVLQAINNQ 264


>gi|325673186|ref|ZP_08152879.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325556021|gb|EGD25690.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 271

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M+R++V + IA++I IP+G+ IG  P +   ++P  Q L       + P+ V+    
Sbjct: 68  AASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIAVALFGI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            H  P  +   L+     W I+ N  AG  A       VA S   T       ++LP I 
Sbjct: 128 GH-RPVFF---LIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAVVLPAIR 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +  TG   A G AW   + +E+          +GLG  I  + ++ ++ +V+  +L++
Sbjct: 184 GHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMAVILVI 236


>gi|91788795|ref|YP_549747.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91698020|gb|ABE44849.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 252

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 83/181 (45%), Gaps = 10/181 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV    + A+++ +P+G+W+G        + P  Q+L       + PL +      +
Sbjct: 59  SLFRVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGN 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++P      L+   + + ++    AG       +   A +F ++ +  +R +I+P + P 
Sbjct: 119 VSP----IFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPE 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   + +E+     I LR +GLG  I +S   G+  ++V+  +++   
Sbjct: 175 IIVGMRIGLGVAWLVVVAAEM-----IALR-SGLGYLIMDSRNAGNRYDLVIASMVIIGV 228

Query: 566 V 566
           +
Sbjct: 229 I 229



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 19/178 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           L PI  I++ I  + ++   +++F   N+ P          IF IF + V+ M       
Sbjct: 91  LNPIFQILRPISPIAWIPLAILWFGVGNVSP----------IFLIFIASVFPMIVQTAAG 140

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  I R     + +F +S +  F  + +P  +P ++  M + +   W  VVA+EMI +  
Sbjct: 141 VHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIVGMRIGLGVAWLVVVAAEMIALRS 200

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVWSNKFRLER 274
                 G+G  I  +    +   ++ A + ++GVI  L D  + R   + S ++R  R
Sbjct: 201 ------GLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRLEGLKSIRWRYGR 252


>gi|71906470|ref|YP_284057.1| nitrate transport permease [Dechloromonas aromatica RCB]
 gi|71846091|gb|AAZ45587.1| Nitrate transport permease [Dechloromonas aromatica RCB]
          Length = 312

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            +S  L  ++ PI+ +++ +  L +L   ++ F    P        AA + IF   +W M
Sbjct: 146 GRSAFLSAMINPIISLLRPVSPLAWLPIGLLVFKKADP--------AATYTIFICSIWPM 197

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +  Q +  +P+D   V+R   LS W+    +  P  +P ++  + +S+   W  +VA+
Sbjct: 198 IMNTAQGVQRVPQDYLNVARVLALSEWKVVTKILFPAVLPYMLTGIRLSIGTAWLVIVAA 257

Query: 211 EMIVVG 216
           EM+  G
Sbjct: 258 EMLTGG 263



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +    A+++ IP+G  +G    +S+ I P   LL       + P  +  + +  
Sbjct: 123 SLQRVGIGFGFAALVGIPLGFILGRSAFLSAMINPIISLLRPVSPLAWLP--IGLLVFKK 180

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    ++ +   + W ++ N   G    P D+  VA    ++ W+    I+ P + PY
Sbjct: 181 ADPAATYTIFIC--SIWPMIMNTAQGVQRVPQDYLNVARVLALSEWKVVTKILFPAVLPY 238

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 239 MLTGIRLSIGTAWLVIVAAEMLTGG 263


>gi|227115048|ref|ZP_03828704.1| putative sulfate ester transporter, permease component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 569

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ S ++  +L   +   L   SRR   +L P +  +  IP LG++   +V F     G 
Sbjct: 121 RLASGLLAGVLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GI 175

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G +LA I     + +  +T      + N+P  L+EV+R+ RL   Q+   L +P ++P
Sbjct: 176 DDGLKLAVII---KAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLIKLTLPAALP 232

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
             +  + +++S  W  ++  E++
Sbjct: 233 TWLTGLRLALSQAWVSLIVVELL 255



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 13/202 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+  ++   +   SL +    +  R L+  V  ++   V   L   +     +  P +
Sbjct: 351 PADVWHMLLQGIRDGSLTEAMQASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFTPTV 410

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +    + 
Sbjct: 411 ATLRQIALFAWLPLLTAWVGNDEVGKITFVALASFFP--------MLVASHRGIRQRSQA 462

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L+EV++  +L  W +   L +P + P +   + +S+   W   + +E  +   T     G
Sbjct: 463 LQEVAQVLQLRLWTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT-----G 517

Query: 225 IGSYIALAIKEQDLLAILYAML 246
           IGS +  A +  D+  I+  ML
Sbjct: 518 IGSLMINAQQLLDMPLIISGML 539


>gi|158423976|ref|YP_001525268.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330865|dbj|BAF88350.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 269

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q A  TT+  +S   +S L     A + A SR +   L P+L   QSIP +      VV+
Sbjct: 65  QEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVW 124

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F   + P KVI A L  +F +  + V        Q   ++  D+ +++R+ + S  Q F 
Sbjct: 125 FGFGMVP-KVISAFLLGVFPVIVAGV--------QGFKSVEGDMRDLARAMKASKLQTFA 175

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   + +S++      +A    VVG+ V    G+G  +  +I   +L  +
Sbjct: 176 MVSLPHAMPAIFAGLKVSVT------LAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTM 229

Query: 242 LYA--MLTMLGVI 252
             A  +L ++GV+
Sbjct: 230 FAALILLALIGVV 242


>gi|168184309|ref|ZP_02618973.1| putative ABC transporter, permease protein [Clostridium botulinum
           Bf]
 gi|237794723|ref|YP_002862275.1| putative ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182672593|gb|EDT84554.1| putative ABC transporter, permease protein [Clostridium botulinum
           Bf]
 gi|229260901|gb|ACQ51934.1| putative ABC transporter, permease protein [Clostridium botulinum
           Ba4 str. 657]
          Length = 253

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P  V   ++++ V    
Sbjct: 68  SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N +++ S+LM F     I  NV+ G  +      E+A+ + +        I LP   PY
Sbjct: 126 SNVSIFTSILMCFPI---IYTNVLLGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++G +   G  W  S+ SEV S     +    L A    +TE+
Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEE 226


>gi|225405727|ref|ZP_03760916.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme
           DSM 15981]
 gi|225042751|gb|EEG52997.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme
           DSM 15981]
          Length = 264

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 42/185 (22%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVV---------SCVSYYHLNPNLWLSLLMIFGTQW 462
           P +   ++PF  L+ + P   F  L +          C+SY  + P +++          
Sbjct: 93  PFLGELLEPFMSLIRSIPVASFVILALIWIGSGSLSVCISYLVVLPIVYV---------- 142

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
               N IAG ++      E+A  FH+   +  R+I +P + PY V+G  TA G +W + I
Sbjct: 143 ----NTIAGLASTDLRLLEMARVFHMPALKKVRFIYVPALMPYLVSGCKTALGMSWKSGI 198

Query: 523 VSEVAS-----------WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +EV             +  ++L T GL A+        +F  VV+  +    F+  L R
Sbjct: 199 AAEVIGIPDTSIGEQLYYSKLYLDTAGLFAW--------TFVIVVVSAVFEQLFLFLLKR 250

Query: 572 FLWHP 576
           F   P
Sbjct: 251 FWRQP 255


>gi|82775852|ref|YP_402199.1| taurine transporter subunit [Shigella dysenteriae Sd197]
 gi|81240000|gb|ABB60710.1| taurine transport system permease protein [Shigella dysenteriae
           Sd197]
          Length = 275

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     GG W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGGGWSTLVAAELIA------ATRGLGFMVQSAGE 235



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ ++L           S  +  +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     ++S   S  Q  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + + GGW  +VA+E+I
Sbjct: 190 VILPGALPEILTGLRIGLGGGWSTLVAAELI 220


>gi|313200132|ref|YP_004038790.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp.
           MP688]
 gi|312439448|gb|ADQ83554.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp.
           MP688]
          Length = 302

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ I++ +  L +L   ++ F    P        AAI+ IF S +W M  +    +  +
Sbjct: 149 PIIGILRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTAVGVSKV 200

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V++   LS W+    +  PF +P ++  + +S+   W  +VA+EM+  G
Sbjct: 201 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 255



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 6/136 (4%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN-LWLSL 454
           +A+++ IP+G  IG    +S    P   +L       + P  +  + +   NP  +W+  
Sbjct: 125 LAALVGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLP--IGLLVFKAANPAAIWV-- 180

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     W ++ N   G S  P D+  VA   +++ W+    I+ P + PY +TG   + 
Sbjct: 181 -IFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSI 239

Query: 515 GGAWNASIVSEVASWG 530
           G AW   + +E+ + G
Sbjct: 240 GVAWLVIVAAEMLTGG 255


>gi|255693778|ref|ZP_05417453.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides finegoldii DSM 17565]
 gi|260620401|gb|EEX43272.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides finegoldii DSM 17565]
          Length = 275

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 22/158 (13%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  ++L+         A S R   +L P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTCLALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    L A+  +F + ++ M   +  +   +  +P+++ E SRSF  + WQ  + +
Sbjct: 144 --------GLGAVPGVFATIIFAMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKV 195

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 196 QLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G     FT   +L +  +G       T+  V+    +A I+ +P+G+W    P 
Sbjct: 56  LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPLGVWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|159027354|emb|CAO90540.1| srpM [Microcystis aeruginosa PCC 7806]
          Length = 256

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+V +++AS I +P+G+ IG    + S +    Q         + PL V  +    L  
Sbjct: 71  RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPLAVMVLGIGDLP- 129

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  L+     W IL N  AG +A    +  +A S   T       IILP I  + +T
Sbjct: 130 ---VYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILSHLLT 186

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G   A G  W   + +E+       + + GLG YI ++ ++ ++ E++  +L++
Sbjct: 187 GFRLAIGIIWIVLVQAEML------VVSAGLGYYILDTRDRLAYSELMAVILVI 234


>gi|171914151|ref|ZP_02929621.1| nitrate/nitrite ABC transporter membrane protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 296

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 12/173 (6%)

Query: 93  SRRLGMVLVPILDIMQSI-PI----LGFLTFTVVYFMNLYPGKVIGA-ELAAIFAIFTSQ 146
           S++      PI+ +++ + P+    LG + F+ V  M+       GA + AA+F I    
Sbjct: 120 SKKFTTAFDPIIQVLRPVSPLAWLPLGMILFSGVKIMDSGGRTTFGASDAAALFTIAICA 179

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    +  +P+D   V++  +LS  +  W + VP ++P +     +S+   W  
Sbjct: 180 MWPTVMNTAVGVRAVPQDYLNVAKVLKLSRTKTLWKVLVPATLPYMFTGFRLSLGIAWLV 239

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +VA EM+         PG+G ++           I+  +LT+  V ++ D+L+
Sbjct: 240 IVAVEMLT------GRPGVGGFLWQQYNANSFAHIILCILTIGVVGYVLDRLM 286



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 16/188 (8%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL---------VVSCVSYYHL 446
           +A +I  PVG  +G     ++   P  Q+L       + PL         ++        
Sbjct: 105 LALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPLGMILFSGVKIMDSGGRTTF 164

Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             +   +L  I     W  + N   G  A P D+  VA    ++  +    +++P   PY
Sbjct: 165 GASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVLKLSRTKTLWKVLVPATLPY 224

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   + G AW   +  E+ +         G+G ++ +     SF  ++L +L +   
Sbjct: 225 MFTGFRLSLGIAWLVIVAVEMLT------GRPGVGGFLWQQYNANSFAHIILCILTIGVV 278

Query: 566 VLALNRFL 573
              L+R +
Sbjct: 279 GYVLDRLM 286


>gi|317049220|ref|YP_004116868.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316950837|gb|ADU70312.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 281

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 12/181 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RV+   ++A++I +P+GI +G      + ++PF       PA+ F PL++      
Sbjct: 90  MTVMRVLAGFLLAALIGVPLGIMMGAYKMWEAFLEPFVSFCRYLPASAFVPLLILWAGIG 149

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I+  V    S+   D  E A +   +     R +++PG  
Sbjct: 150 EMQ-----KILVIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLGCSNRSIVRRVLIPGAA 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+          +G+G  I +S    +  +++ G++++ 
Sbjct: 205 PGIAELLRLVLGWAWTYVIVAELIG------SESGIGHMIVDSQALLNTGQIIFGIIVIG 258

Query: 564 C 564
           C
Sbjct: 259 C 259


>gi|188535297|ref|YP_001909094.1| taurine transporter subunit [Erwinia tasmaniensis Et1/99]
 gi|188030339|emb|CAO98228.1| Taurine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 275

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVVIGVPVGILMGLNATLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   + W+   +++LPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250

Query: 564 CFVLALN 570
               AL 
Sbjct: 251 LIAFALE 257



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ +++       L   +  L  +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIVIALLAAVVIGVPVGILMGLNATLRGILDPLIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     +RS   S WQ  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220


>gi|121609547|ref|YP_997354.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|121554187|gb|ABM58336.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
          Length = 328

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   +++ RV +   +A+++ IP G  IG  P ++    P   LL       + PL    
Sbjct: 132 WNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWLPL--GL 189

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +   N     ++ +   + W ++ N   G    P D+  VA   +++ W+    I+LP
Sbjct: 190 LVFKGANAAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWQIATRILLP 247

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + PY +TG   A G AW   + +E+ + G
Sbjct: 248 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 171 PLISLLRPVSPLAWLPLGLLVFK--------GANAAAIWTIFICSIWPMVINTAVGVQRV 222

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS WQ    + +P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 223 PQDYMNVARVLNLSEWQIATRILLPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277


>gi|328956608|ref|YP_004373994.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4]
 gi|328672932|gb|AEB28978.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4]
          Length = 245

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 29/220 (13%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----------ITMFRVVVLIIIASIIWIP 403
           + + + W+ + Y+V H    + +  I+L              ++FR++  I+I+ +I +P
Sbjct: 12  IGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISILIGVP 71

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIWIG     +  + P   L+   P   F P+ +     + L     +SL++     W 
Sbjct: 72  LGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLL---FGLGDASKISLVV-----WI 123

Query: 464 ILFNVI----AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           I+F +I     G       + +V    H + W+ + Y++ P I P  ++G +  C G   
Sbjct: 124 IVFQLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISG-LRVCIGIAV 182

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           AS+      +   +    GLG YI  +     +P++  G+
Sbjct: 183 ASLF-----FAENYATQYGLGYYIMNAWSVIDYPQMFCGI 217


>gi|149203199|ref|ZP_01880169.1| possible nitrate transport system permease protein [Roseovarius sp.
           TM1035]
 gi|149143032|gb|EDM31071.1| possible nitrate transport system permease protein [Roseovarius sp.
           TM1035]
          Length = 277

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    +  + +D   V+R+  L  ++  + + +P + P +V
Sbjct: 147 SEASAIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVILPAAAPTIV 206

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G++
Sbjct: 207 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGIV 258



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IP+G  IG  P     + PF Q+L       + PL +  +    
Sbjct: 89  SIYRVLSGYLMAAVVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFVIQDSE 148

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +  ++    +ILP   P
Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVILPAAAP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             VTG   + G AW   + +E+   G      TG+G Y+
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236


>gi|159898102|ref|YP_001544349.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891141|gb|ABX04221.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
          Length = 274

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 14/177 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L Q+ SRT +  L    ++   + V   + A    L  ++ P L I+Q+IPI+  
Sbjct: 74  LTQGALLQHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAV 133

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +++       K++ A L   F + +S +         +L ++PRD+ E++     +
Sbjct: 134 APLILIWVGADLRAKLLVAALVTFFPMLSSVI--------VALRSVPRDIREMAAISGAN 185

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            WQ  W + +P ++PG+   +   ++      +A+   VV + +    G+G+ I +A
Sbjct: 186 RWQSLWQIELPLALPGIFGGIKTGLA------LATTGAVVAEFIGGREGLGALINIA 236


>gi|126464361|ref|YP_001045474.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126106172|gb|ABN78702.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 276

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 11/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R++  + +A ++   +G+ IG      +  +P    L   P   + P+++     
Sbjct: 78  ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISALMPIPTLAWTPILLLV--- 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++    ++++ I    + I++NV+ G          VA+S   +  +  RY+I+PGI 
Sbjct: 135 FGIDNRTTITVVFI-AASFEIIYNVVTGIEMMTRKTYWVAASMGASRLQTLRYVIIPGIL 193

Query: 504 PYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           PY +TG     G AW A I +E +A+  H      GLG  I ++ E      +  G+L +
Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLAASSH------GLGFMIYDAQEYMDMKSIYGGILTI 247

Query: 563 CCFVLALNR 571
               L + R
Sbjct: 248 SVLGLLIER 256


>gi|325292270|ref|YP_004278134.1| glycine/betaine transport system; permease protein [Agrobacterium
           sp. H13-3]
 gi|325060123|gb|ADY63814.1| Glycine/betaine transport system; permease protein [Agrobacterium
           sp. H13-3]
          Length = 302

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 68  TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +++ A +I+++       L  +S RL  ++ P+LD+MQ++P   +L   VV F   
Sbjct: 109 TTLSIVAIATLIAIVIGLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIF--- 165

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV G     I+AI    V  +T S+   L +  R++ E + +F  S  QK + + +P
Sbjct: 166 GIGKVPGLIAVVIYAI--PPVIRLT-SLGIRLVD--REVLEAADAFGSSNGQKLFNVQLP 220

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++P ++  +  ++      VV + M+ VG       G+G  +  AI  Q
Sbjct: 221 LALPTIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQ 263


>gi|114766329|ref|ZP_01445315.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Pelagibaca
           bermudensis HTCC2601]
 gi|114541446|gb|EAU44492.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Roseovarius sp. HTCC2601]
          Length = 360

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453
           +I S + IP+GI  G  P+ +S I P  Q+        + P+V   +S     N  L+  
Sbjct: 165 LIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATNDGLFSK 224

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G ++   D   V+    +  W     ++LP   P   
Sbjct: 225 SFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LAKIMVAVFTI 336

Query: 568 ALNRFL 573
            +  FL
Sbjct: 337 GIIGFL 342



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW 
Sbjct: 237 SLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 296

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
            ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D+++F
Sbjct: 297 VLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMF 348


>gi|115360505|ref|YP_777642.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115285833|gb|ABI91308.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 295

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
            A++ R+GM+L  +LD MQ++P   +L   V+ F +   P     A +A I       V 
Sbjct: 112 GARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
             T  + Q    +  +L E  RSF  + WQ  W + +P ++P    G+   +MM++S   
Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             VV + MI  G       G+G Y+   I+  D+
Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245


>gi|221200703|ref|ZP_03573744.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2M]
 gi|221206899|ref|ZP_03579910.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2]
 gi|221172973|gb|EEE05409.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2]
 gi|221179275|gb|EEE11681.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2M]
          Length = 295

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
            A++ R+GM+L  +LD MQ++P   +L   V+ F +   P     A +A I       V 
Sbjct: 112 GARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
             T  + Q    +  +L E  RSF  + WQ  W + +P ++P    G+   +MM++S   
Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             VV + MI  G       G+G Y+   I+  D+
Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245


>gi|184158672|ref|YP_001847011.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874367|ref|ZP_08442278.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
 gi|183210266|gb|ACC57664.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|322507517|gb|ADX02971.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323518587|gb|ADX92968.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332737446|gb|EGJ68362.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
          Length = 279

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      ++A     S+     L P    ++SIP L ++   +++     
Sbjct: 86  STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ + L EV + +RL+ +Q+   + +P 
Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S+S  W F++A+E+I  
Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225


>gi|293609438|ref|ZP_06691740.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827890|gb|EFF86253.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 279

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      ++A     S+     L P    ++SIP L ++   +++     
Sbjct: 86  STWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ + L EV + +RL+ +Q+   + +P 
Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S+S  W F++A+E+I  
Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 25/179 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV++  II S + +   IW+G      + ++P    + + P+  + PL++      
Sbjct: 85  ISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 138

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL +       L+  G  +    N +A          EV   + +  ++    I
Sbjct: 139 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISI 193

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ILP   P  +TG   +   +W   I +E+ +       T G+G  +++  E  S P++V
Sbjct: 194 ILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 245


>gi|296271876|ref|YP_003654507.1| binding-protein-dependent transporter inner membrane component
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096051|gb|ADG92001.1| binding-protein-dependent transport systems inner membrane
           component [Arcobacter nitrofigilis DSM 7299]
          Length = 341

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 24/179 (13%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           AS TTL + +++++ S+L        +AKS  +  +L PILD MQ+ P   +L   V+ F
Sbjct: 128 ASMTTLALVITSVLFSVLIGLPLGIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVMLF 187

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G V G  +  IFA+    +  +T      +  +P DL E SRSF  S  Q  + +
Sbjct: 188 ---GIGNVPGVIVTIIFAL--PPLIRLT---NLGIRQVPADLIEASRSFGASSSQMLFKV 239

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +P +MP    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 240 QLPVAMPTIMAGINQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDI 287


>gi|149199053|ref|ZP_01876093.1| possible nitrate transport system permease protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137842|gb|EDM26255.1| possible nitrate transport system permease protein [Lentisphaera
           araneosa HTCC2155]
          Length = 275

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 7/130 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    + N+ +D  +V+++  LS  +  + + +P S P + 
Sbjct: 145 SEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVILPASAPTIF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG Y+       DL +++++++ M+G++ 
Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFSII-MIGLVG 257

Query: 254 LYDQLLFRPM 263
           +   L+   +
Sbjct: 258 MTLDLILNAL 267



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++    A+ I IP+G  +G    +   + PF Q+L       + PL +  +    
Sbjct: 87  SLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLALFVIKDSE 146

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+ +VA +  ++  +    +ILP   P
Sbjct: 147 KS-----AIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVILPASAP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              TG   + G AW   + +E+   G      TG+G Y+
Sbjct: 202 TIFTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234


>gi|298372810|ref|ZP_06982800.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275714|gb|EFI17265.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 258

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 15/174 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F+L+  VL + + N +L        P D+  I+P    V  + ++   +  R+L+ +VI
Sbjct: 22  VFNLIWLVLALALRNKILPN------PIDVYRIMPQEF-VAGMGRHVMASLWRVLAGIVI 74

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LLF  V     A S+RL  +L P+L +   +P L  L   ++ F      K++   L  
Sbjct: 75  ALLFGVVGGLATAFSKRLNKILEPLLYLSYPVPKLALLPVVMIVFGIDEASKIVMIVLIV 134

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           +F         +  S+  ++ +IPRD   V  S   + WQ   ++ +P ++P +
Sbjct: 135 VF--------QLMISIRDAIRHIPRDNYYVLMSLGATKWQNIRHIIIPATLPSI 180


>gi|85705781|ref|ZP_01036878.1| possible nitrate transport system permease protein [Roseovarius sp.
           217]
 gi|85669771|gb|EAQ24635.1| possible nitrate transport system permease protein [Roseovarius sp.
           217]
          Length = 277

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E +AIF IF   +W M  +    +  + +D   V+R+  L   +  + + +P + P +V
Sbjct: 147 SEASAIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVILPAAAPTIV 206

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+G++
Sbjct: 207 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGIV 258



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IP+G  IG  P     + PF Q+L       + PL +  +    
Sbjct: 89  SIYRVLSGYLMAALVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFIIQDSE 148

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +   +    +ILP   P
Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVILPAAAP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             VTG   + G AW   + +E+   G      TG+G Y+
Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236


>gi|295111611|emb|CBL28361.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synergistetes bacterium SGP1]
          Length = 256

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV +  + A  I +P+G+ +G        + P+   +   P   + PL    + ++
Sbjct: 59  ITLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPL---SIIWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     +  ++     + IL N I+G      ++K  A       W+  R +++PG  P
Sbjct: 116 GLGDGPTI-FMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPGALP 174

Query: 505 YYVTGAITACGGAWNASIVSE 525
            ++TG   A GGAW + I +E
Sbjct: 175 SFLTGCRLALGGAWMSVICAE 195



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 16/191 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R+    V ++        L   SR   + L P ++ ++ +PI+ ++  ++++F  L 
Sbjct: 60  TLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWF-GLG 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  I       F I  S V+ +  +    + NI  + +  +R      WQ    + VP 
Sbjct: 119 DGPTI-------FMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPG 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +    +++ G W  V+ +E I          G G YI +  + +    +LYA++ 
Sbjct: 172 ALPSFLTGCRLALGGAWMSVICAEFIATSK------GFG-YIMVEAQVRMNTPLLYALMI 224

Query: 248 MLGVI-FLYDQ 257
           M  ++ F  D+
Sbjct: 225 MSALVGFAMDK 235


>gi|297618552|ref|YP_003706657.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297618612|ref|YP_003706717.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377529|gb|ADI35684.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377589|gb|ADI35744.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
          Length = 278

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 25/197 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + +  T   ++++ +I+L+F      + A+S+++ ++L P+LD MQ++P L +L   V++
Sbjct: 90  EISMNTLALIITSTLIALIFGIPLGIMKARSKKVELLLNPLLDFMQTLPSLAYLIPAVLF 149

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR---DLEEVSRSFRLSGWQ 178
           F   + PG            + ++ ++ M  ++  +   I +    L EV  SF  + WQ
Sbjct: 150 FGTGVAPG------------VLSTVIFAMPPTIRLTALGIEQVSDQLVEVGESFGATSWQ 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +MP ++  +  ++   +  VV S  I  G       G+G  I   I+   L
Sbjct: 198 ILTKIELPTAMPSILMGINQTILLSFSMVVISGFIGSG-------GLGDSIISGIQRYSL 250

Query: 239 LAILYA--MLTMLGVIF 253
              L A   +T L VIF
Sbjct: 251 APALEAGIAVTFLAVIF 267


>gi|300775527|ref|ZP_07085388.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300505554|gb|EFK36691.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 275

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 23/166 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + +L+ +     LAAKS+    ++ P+LD+MQ++P   +L   V++F     GKV GA  
Sbjct: 100 ITALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFF---SIGKVPGAFA 156

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GL 192
             IFA+       +T    ++   +P+D+ E +R+F  +G Q  + + +P +M     G+
Sbjct: 157 TIIFAM--PPAVRLTALGIEA---VPKDIVEAARAFGATGRQILFKVELPLAMKTILTGI 211

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +++S+S     VV + MI  G       G+G  +   I   D+
Sbjct: 212 NQTILLSLS----MVVIAGMIAAG-------GLGEKVLEGINNLDI 246


>gi|134093701|ref|YP_001098776.1| nitrate ABC transporter permease [Herminiimonas arsenicoxydans]
 gi|133737604|emb|CAL60647.1| Nitrate transport permease protein nrtB [Herminiimonas
           arsenicoxydans]
          Length = 304

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 113 SLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLP--IGLLVFKA 170

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    S+ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 171 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 228

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 229 MLTGVRLAIGTAWLVIVAAEMLTGG 253



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 28/226 (12%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           ++++ P F+S  + P IF +L  VLV  II+    GI    V       +   +D+ + P
Sbjct: 44  MFSLRPFFMS--VVPPIFGVLFLVLVWEIISAKNSGIPSPAV------TLKSAIDLFADP 95

Query: 63  QYASRTTLRMLS-AMVISLLFTFVYATLAA-----------KSRRLGMVLVPILDIMQSI 110
            Y++    + +   ++ SL    V   LAA           + + L  +  PI+ +++ +
Sbjct: 96  FYSNGPNDQGIGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPV 155

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
             L +L   ++ F          A+ AAI++IF   +W M  +    +  +P+D   V+R
Sbjct: 156 SPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAR 207

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 208 VLNLSEWKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 253


>gi|114705670|ref|ZP_01438573.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Fulvimarina pelagi HTCC2506]
 gi|114538516|gb|EAU41637.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Fulvimarina pelagi HTCC2506]
          Length = 364

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 19/202 (9%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A+II +PVGI  G    I+  + P  Q+        + P+V   VS  ++N +  L  
Sbjct: 169 LLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIVSALYVNASDALPK 228

Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            M+         + W  L N   G ++   D   V     ++  +    ++LP   P   
Sbjct: 229 SMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITKLVLPSAMPLIF 288

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ V+ +  
Sbjct: 289 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIIVAVITIGI 342

Query: 565 FVLALNRF---LWHPLYLYGTR 583
               L+R    L       GTR
Sbjct: 343 VGFILDRIMAALQSAFTFSGTR 364



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 9/116 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  V +  +LS  +    L +P +MP +   + +S+  GW  
Sbjct: 242 LWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITKLVLPSAMPLIFTGLRLSLGVGWMV 301

Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLL 259
           ++A+EM+         PG+G ++         D LA I+ A++T+  V F+ D+++
Sbjct: 302 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIIVAVITIGIVGFILDRIM 351


>gi|83590806|ref|YP_430815.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573720|gb|ABC20272.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 261

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 20/194 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++FR     ++A+++ IP+G+ +G+   +   + P  Q+L       + PLV      
Sbjct: 59  AVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITG----WRWWRYII 498
             L      ++++IF   +Y IL   IA        + +VA +F  +G    WR    +I
Sbjct: 119 GDLP-----AIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWR----VI 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P  FPY   G   A G AW   +  E+          +GLG  I ++        V+ G
Sbjct: 170 VPAAFPYITMGLHFALGTAWIFLVAGEMMG------VRSGLGFLIIDARNSMDTGLVIAG 223

Query: 559 VLIMCCFVLALNRF 572
           +L++    LA++R 
Sbjct: 224 MLVIGLLGLAIDRL 237



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 15/216 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++  +   L    L ++ + +  R  S  +++ +       L   SRRL + + P++
Sbjct: 38  PGDVLQSLSQQLHQGVLGEHIAVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLV 97

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +++ I  + +L    ++F        IG +L AI  IF +  + +      ++ N+   
Sbjct: 98  QVLRPISPIAWLPLVTLWFG-------IG-DLPAIVIIFMASFYPILLGTIAAVKNVDPV 149

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             +V+++F  SG    W + VP + P +   +  ++   W F+VA EM+ V        G
Sbjct: 150 YIKVAKNFGASGSHILWRVIVPAAFPYITMGLHFALGTAWIFLVAGEMMGVRS------G 203

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +G  I  A    D   ++  ML ++G++ L    LF
Sbjct: 204 LGFLIIDARNSMDTGLVIAGML-VIGLLGLAIDRLF 238


>gi|33603283|ref|NP_890843.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577407|emb|CAE34672.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 265

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR +V   I  +  +P G++ G+   + + + P    +   P   F P+    V Y+ 
Sbjct: 75  SLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPM---AVLYFG 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFP 504
           L   +   +L++F    Y   +  AGA + P  +   A S  +T  + +WR ++ P   P
Sbjct: 132 LG-EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWR-VVFPSSIP 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TG   A   +W   + +E+           GLG  I+++ +    P V +G+ ++  
Sbjct: 190 HIFTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGL 243

Query: 565 FVLALNRFL 573
             L LN  L
Sbjct: 244 IGLVLNVML 252



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R L    I +L    +   +   + +G ++ PI+  ++ IP + F+   V+Y
Sbjct: 70  DHVGASLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLY 129

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFW 181
           F     GKV+         +FT+  +N +F   Q+   ++P      + S  ++  Q FW
Sbjct: 130 FGLGEMGKVV-------LIVFTA--FNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFW 180

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  P S+P +   + ++M+  W  VVA+E++
Sbjct: 181 RVVFPSSIPHIFTGLKVAMALSWAVVVAAELV 212


>gi|113868975|ref|YP_727464.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527751|emb|CAJ94096.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 289

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 12/181 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++A+++ +P+GI++G      +  +PF       PA+ F PL++      
Sbjct: 97  MTVWRVVGGFVLAAVLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 156

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I+  V         D  E A +         R +++PG  
Sbjct: 157 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAA 211

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 212 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 265

Query: 564 C 564
           C
Sbjct: 266 C 266


>gi|260426707|ref|ZP_05780686.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260421199|gb|EEX14450.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 394

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453
           +I S + IP+GI  G  P+ +S I P  Q+        + P+V   +S     N  L+  
Sbjct: 199 LIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATNDGLFSK 258

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G ++   D   V+    +  W     ++LP   P   
Sbjct: 259 SFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 318

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 319 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LAKIMVAVFTI 370

Query: 568 ALNRFL 573
            +  FL
Sbjct: 371 GIIGFL 376



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW 
Sbjct: 271 SLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 330

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
            ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D+++F
Sbjct: 331 VLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMF 382


>gi|323490330|ref|ZP_08095545.1| glycine betaine ABC transporter permease [Planococcus donghaensis
           MPA1U2]
 gi|323396000|gb|EGA88831.1| glycine betaine ABC transporter permease [Planococcus donghaensis
           MPA1U2]
          Length = 276

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 25/172 (14%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +T   ++ + +IS++       LAA ++ +  ++ PILD MQ++P   +L   ++ 
Sbjct: 88  EAAMQTVAIVIVSTLISVIIGIPVGILAATNKTMANIVRPILDFMQTLPSFVYLIPAILL 147

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F +   P  +      A F   T     MT      +  +P D+ E S++F  + WQ  +
Sbjct: 148 FGLGNVPAVI------ATFVFATPPAVRMT---TLGILQVPADVVEASKAFGSTKWQLLY 198

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            + +P +MP    G+   MM+++S     V+AS        +I  PG+GS +
Sbjct: 199 KVQLPLAMPSIMAGINQTMMLALS---MAVIAS--------MIGAPGLGSVV 239


>gi|283784185|ref|YP_003364050.1| taurine ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282947639|emb|CBG87194.1| taurine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 277

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 19/201 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A+I+ IPVGI +G  P I   + P  +L    P   + PL+V     
Sbjct: 83  AASLTRIVLALLAAAIVGIPVGIAMGLSPAIRGVLDPIIELYRPVPPLAYLPLMVIWFGI 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 143 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAAQSLGASRSQVLWFVILPGAL 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 199 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 252

Query: 564 --CFVL-----ALNRFL--WH 575
              F+L     AL R L  WH
Sbjct: 253 VIAFMLELGLRALQRRLTPWH 273


>gi|27380844|ref|NP_772373.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27354009|dbj|BAC50998.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 335

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    ++A ++ IP+G  IG  P +S  + PF Q+L       + PL +  +    
Sbjct: 147 SIARVGTGYLLAVLVAIPLGFLIGMSPLLSKALDPFIQVLKPISPLAWMPLALYTIKDSS 206

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           ++     ++ +IF  + W +L N + G ++   ++  VA +  +   R    +ILP   P
Sbjct: 207 IS-----AIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGTIRRAFTVILPAAAP 261

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 262 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGI 315

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 316 VGMLLDQIL 324



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++AIF IF   +W M  +    + ++ ++   V+R+  +   ++ + + +P + P ++
Sbjct: 205 SSISAIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGTIRRAFTVILPAAAPTIL 264

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ A+L +  V  
Sbjct: 265 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGIVGM 318

Query: 254 LYDQLLFR 261
           L DQ+L R
Sbjct: 319 LLDQILAR 326


>gi|330891567|gb|EGH24228.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 283

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAARVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282


>gi|251790233|ref|YP_003004954.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247538854|gb|ACT07475.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 528

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 16/195 (8%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            PR++   +   L    L    + +  R L+   +      +   L  +SR    +L P+
Sbjct: 313 TPREVATTLLAGLSNGELTSALAASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLTPL 372

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L  ++S+ +  +L     +F      KV+   LAA F            + YQ + ++P 
Sbjct: 373 LSALRSVALFAWLPLLTAWFGLEESVKVVFIALAAFFPTL--------LASYQGVRHLPP 424

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E +R  RL+  Q+  +L +P  +P L   + +S+   W   + +E  +         
Sbjct: 425 SLLETARVLRLNARQRLRWLTLPAVLPALFSGIRLSLMHAWVGTIGAEYFIASGN----- 479

Query: 224 GIGSYIALAIKEQDL 238
           GIGS +   I+ Q L
Sbjct: 480 GIGSMM---IRAQQL 491


>gi|254560198|ref|YP_003067293.1| nitrate transport system permease [Methylobacterium extorquens DM4]
 gi|254267476|emb|CAX23317.1| nitrate transport system permease protein [Methylobacterium
           extorquens DM4]
          Length = 284

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ IPVG  IG  P +S  + P+ Q+L       + PL +  +    
Sbjct: 96  SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 155

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N + G +    ++  VA +  ++  R    +ILP   P
Sbjct: 156 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 210

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 211 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 264

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 265 VGMVLDQLL 273



 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + +P + P ++
Sbjct: 154 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 213

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ ++L +  V  
Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 267

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 268 VLDQLLAR 275


>gi|258424287|ref|ZP_05687168.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
 gi|257845553|gb|EEV69586.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
          Length = 253

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P VV     
Sbjct: 61  AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    ++     + I FN I G       + ++A++ ++TGW  +R I+ PG F
Sbjct: 121 ----GSLPAIAIIFIAAFFPIAFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+          +GLG  I ++    +  +V+  +  + 
Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230

Query: 564 CFVLALNRFL 573
            F   ++RF+
Sbjct: 231 LFGFIIDRFI 240


>gi|242278151|ref|YP_002990280.1| glycine/betaine ABC transporter permease [Desulfovibrio salexigens
           DSM 2638]
 gi|242121045|gb|ACS78741.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 278

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 70/132 (53%), Gaps = 18/132 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++LLF      LAA ++ +  +++P+LD+MQ++P   +L   + +F            L
Sbjct: 102 LLALLFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPAIPFF-----------GL 150

Query: 137 AAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190
             + AIF++ ++ M  S+  +   +  +P +L E + +F  + WQ+ + L +P + P   
Sbjct: 151 GKVAAIFSTIIFAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQRLFKLELPIATPTIM 210

Query: 191 -GLVWNMMMSMS 201
            G+   +M+++S
Sbjct: 211 AGVNQTVMLALS 222


>gi|153808445|ref|ZP_01961113.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185]
 gi|149128767|gb|EDM19984.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185]
          Length = 275

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 22/158 (13%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  ++L+         A S R   +L P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTCLALVVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    L A+  +F + ++ M   +  +   +  +P+++ E SRSF  + WQ  + +
Sbjct: 144 --------GLGAVPGVFATIIFAMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKV 195

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 196 QLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           AW   G     FT   +L +  +G       T+  V+    +A ++ +P+GIW    P  
Sbjct: 57  AWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALVVGVPLGIWTANSPRA 116

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G   
Sbjct: 117 DKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIRQ 172

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            P +  E + SF  T W+    + LP   P  +TG
Sbjct: 173 VPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|297539843|ref|YP_003675612.1| nitrate ABC transporter inner membrane subunit [Methylotenera sp.
           301]
 gi|297259190|gb|ADI31035.1| nitrate ABC transporter, inner membrane subunit [Methylotenera sp.
           301]
          Length = 325

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F    P        AAI+ IF S +W M  +    +  +
Sbjct: 172 PIISLLRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTSVGVSKV 223

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V++   LS W+    +  PF +P ++  + +S+   W  +VA+EM+  G
Sbjct: 224 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 278



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 138 SLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLP--IGLLVFKA 195

Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP  +W+   +     W ++ N   G S  P D+  VA   +++ W+    I+ P + P
Sbjct: 196 ANPAAIWV---IFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLP 252

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   + G AW   + +E+ + G
Sbjct: 253 YMMTGVRLSIGVAWLVIVAAEMLTGG 278


>gi|51892790|ref|YP_075481.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51856479|dbj|BAD40637.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 255

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++   T   +L+ M I +L  F    LA   R    +L+ +  IM  +P +  L   
Sbjct: 50  SLLRHTLHTLQMVLTGMSIGILTAFCLTALATAGRWGRDLLLTLTTIMNPLPAIALLPVA 109

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++ + + P  ++       F I  S VW++  +M+     +P    +  ++  L GW  
Sbjct: 110 LLW-LGIGPRSLV-------FVIANSVVWSLALNMHTGFETVPLTWRQAGQNLGLRGWGL 161

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             ++ +P ++P ++  + ++ S GW  V+A+E++
Sbjct: 162 IRHVYLPAALPYILTGVKIAWSFGWRTVIAAELV 195


>gi|311108302|ref|YP_003981155.1| nitrate ABC transporter permease [Achromobacter xylosoxidans A8]
 gi|310762991|gb|ADP18440.1| nitrate ABC transporter, permease protein [Achromobacter
           xylosoxidans A8]
          Length = 276

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A++I IP G  IG    + +   P   LL   P +    L +  + +  
Sbjct: 87  SLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLR--PVSPLAWLPLGLLLFKA 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G S  P D+  VA   +++ W+    ++LP + PY
Sbjct: 145 ANPAAIWAIFIC--SIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPY 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ + ++
Sbjct: 203 VLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFVI 253



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A  AAI+AIF   +W M  +    +  +P+D   V+R   LS W+    + +P  +P +
Sbjct: 144 AANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYV 203

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +  + +S+   W  +VA+EM+  G  +
Sbjct: 204 LTGVRLSIGTAWLVIVAAEMLTGGTGI 230


>gi|114332018|ref|YP_748240.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
 gi|114309032|gb|ABI60275.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
          Length = 278

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 93/188 (49%), Gaps = 16/188 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ + M+I LL +   A +  +   L  +++P++  +  I  + ++ FT+V         
Sbjct: 92  RVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAWIPFTIV--------- 142

Query: 131 VIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           VIG    AA+F +F + +  MT S+  +L +IP +  +++ +   S  + +WY+ +P  +
Sbjct: 143 VIGIGGPAAVFIVFMAVLGTMTLSLIAALDSIPDEYLKIAHNLGTSRIRMWWYIRLPAII 202

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P  +  + MS  G W  V+A EM  +        G+G  I +A +  ++  ++  +L + 
Sbjct: 203 PSTMTAIRMSFFGAWMAVLAGEMAGLNS------GLGYMIIMAQQMYNMKLVMVGILAIG 256

Query: 250 GVIFLYDQ 257
            + F  D+
Sbjct: 257 FIGFAIDR 264



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 10/188 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ RV   ++I  ++   + I +   P +   I P  Q LA      + P  +  +  
Sbjct: 87  TITLGRVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAWIPFTIVVIGI 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +++  + + GT   +  ++IA   + P+++ ++A +   +  R W YI LP I 
Sbjct: 147 GG-PAAVFIVFMAVLGT---MTLSLIAALDSIPDEYLKIAHNLGTSRIRMWWYIRLPAII 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T    +  GAW A +  E+A         +GLG  I  + +  +   V++G+L + 
Sbjct: 203 PSTMTAIRMSFFGAWMAVLAGEMAG------LNSGLGYMIIMAQQMYNMKLVMVGILAIG 256

Query: 564 CFVLALNR 571
               A++R
Sbjct: 257 FIGFAIDR 264


>gi|270262342|ref|ZP_06190614.1| transporter [Serratia odorifera 4Rx13]
 gi|270044218|gb|EFA17310.1| transporter [Serratia odorifera 4Rx13]
          Length = 294

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 133 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 184

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 185 EGVARIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTG 244

Query: 216 G 216
           G
Sbjct: 245 G 245



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP G  +G    +++ + P   LL       + P  +  
Sbjct: 100 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLP--IGL 157

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +    P    S   IF  + W ++ N   G +  P D+  VA    ++ W   R I+ 
Sbjct: 158 LLFQRAEP---ASTWTIFICSIWPMILNTAEGVARIPQDYLNVARVLKLSEWTVMRKILF 214

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           P + PY +TG   + G AW   + +E+ + G
Sbjct: 215 PAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 245


>gi|169795525|ref|YP_001713318.1| putative binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AYE]
 gi|215483012|ref|YP_002325217.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|301344982|ref|ZP_07225723.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB056]
 gi|301513508|ref|ZP_07238745.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB058]
 gi|301597423|ref|ZP_07242431.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB059]
 gi|332850711|ref|ZP_08432958.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332866988|ref|ZP_08437305.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|169148452|emb|CAM86318.1| putative binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AYE]
 gi|213986297|gb|ACJ56596.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|332730548|gb|EGJ61864.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332734317|gb|EGJ65445.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
          Length = 279

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      ++A     S+     L P    ++SIP L ++   +++     
Sbjct: 86  STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ + L EV + +RL+ +Q+   + +P 
Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S+S  W F++A+E+I  
Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225


>gi|227509979|ref|ZP_03940028.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane-spanning subunit [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227190585|gb|EEI70652.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane-spanning subunit [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 27/199 (13%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS+ + +++ PILD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG +     + IFA+  T ++ N+       +  +P DL E + S+  + WQK   +
Sbjct: 154 GMVPGVI----ASVIFAMPPTIRMTNL------GIRQVPEDLIEAADSYGSTSWQKLIKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +P +    M G+  +MM+S+S          M+V+  ++I   G+G+ +  A+   D  
Sbjct: 204 QLPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRNDAG 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
           +   A L ++ +  + D++
Sbjct: 253 SGFAAGLAIVILAIILDRI 271


>gi|163850577|ref|YP_001638620.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
 gi|163662182|gb|ABY29549.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
          Length = 279

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ IPVG  IG  P +S  + P+ Q+L       + PL +  +    
Sbjct: 91  SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N + G +    ++  VA +  ++  R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMVLDQLL 268



 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + +P + P ++
Sbjct: 149 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ ++L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 262

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 263 VLDQLLAR 270


>gi|157372796|ref|YP_001480785.1| taurine transporter subunit [Serratia proteamaculans 568]
 gi|157324560|gb|ABV43657.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 279

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 21/202 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++V ++ A II +PVGI +G    +   + P  ++    P   + PL+V     
Sbjct: 85  AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A +     W+  R+++LP   
Sbjct: 145 GETS-KILLIYLAIFAP---VTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560
           P  +TG     G  W+  + +E+ +       T GLG ++ +S  +    +VVL   GV+
Sbjct: 201 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIGVI 253

Query: 561 IMCCFVL-----ALNRFL--WH 575
            +  F L     AL R L  WH
Sbjct: 254 AIIAFGLELGLRALQRRLTPWH 275



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+++I + +P L +L   V++F        IG E + I  I+ +    +T S    +
Sbjct: 118 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSAVAGV 169

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   + WQ   ++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 170 RSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 224


>gi|222055625|ref|YP_002537987.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564914|gb|ACM20886.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 300

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A I  +P+G+ IG+R  +   + PF ++L   P  V+ P  ++ +  +        S+
Sbjct: 120 LLALITGVPLGLLIGWRGRLFRAVNPFTKVLGPIPPIVYIPYAIALLPSFRAA-----SI 174

Query: 455 LMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            +IF G  W I  N + G    P    + A   ++        +ILPG  P   TGA  A
Sbjct: 175 FVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLNLRETTLLFRVILPGAMPSICTGATLA 234

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
               ++  +++     G      +G+G Y+    +   +  V++G++ +   V
Sbjct: 235 L--VFSLVLLTAAELIGA----NSGIGWYVKNFADFADYQRVIVGIIFISLVV 281


>gi|171316280|ref|ZP_02905502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171098602|gb|EDT43401.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 295

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
            A++ R+GM+L  +LD MQ++P   +L   V+ F +   P     A +A I       V 
Sbjct: 112 GARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
             T  + Q    +  +L E  RSF  + WQ  W + +P ++P    G+   +MM++S   
Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             VV + MI  G       G+G Y+   I+  D+
Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245


>gi|145589179|ref|YP_001155776.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047585|gb|ABP34212.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 286

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++A I+ IP G WIG  P       PF Q+L         PL    ++ Y 
Sbjct: 98  SLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPIS-----PLAWMPIALYT 152

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +    + +IF  + W +L N   G +    +   VA +  ++  R    +ILP   P
Sbjct: 153 IKDSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVILPAAAP 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++
Sbjct: 213 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFLWNEWNNLSLSSVIFAILLI 264



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 65/119 (54%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++ IF IF   VW M  +    + N+ ++L  V+++  +S  +K + + +P + P ++
Sbjct: 156 SAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVILPAAAPTIL 215

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +SM   W  +VA+EM+V G       GIG ++        L ++++A+L ++G++
Sbjct: 216 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFLWNEWNNLSLSSVIFAIL-LIGIV 267


>gi|90419876|ref|ZP_01227785.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport
           system [Aurantimonas manganoxydans SI85-9A1]
 gi|90335917|gb|EAS49665.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport
           system [Aurantimonas manganoxydans SI85-9A1]
          Length = 364

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A+II IPVGI  G    I+  + P  Q+        + P+V   VS  ++N +  +  
Sbjct: 169 VLATIIAIPVGIACGLSATINGALNPLIQIFKPVSPLAWLPIVTMIVSALYVNASDAVPK 228

Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            M+         + W  L N   G ++   D   V     +   +    ++LP   P   
Sbjct: 229 SMVVSAITVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLPTHKTITKLVLPSAMPLIF 288

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ V+ +  
Sbjct: 289 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIIVAVITIGI 342

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 343 VGFMLDRIM 351



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  V +  +L   +    L +P +MP +   + +S+  GW  
Sbjct: 242 LWPTLINTALGVASIDKDLVNVGKVLQLPTHKTITKLVLPSAMPLIFTGLRLSLGVGWMV 301

Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLL 259
           ++A+EM+         PG+G ++         D LA I+ A++T+  V F+ D+++
Sbjct: 302 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIIVAVITIGIVGFMLDRIM 351


>gi|152996830|ref|YP_001341665.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150837754|gb|ABR71730.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 323

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 13/163 (7%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWLS 453
           +AS+I IP+GI IG    + S + P  Q+        + PLV  V   SY   +P    S
Sbjct: 126 LASLIAIPLGILIGLNRSVYSALNPVIQVFKPVSPLAWLPLVTMVVSASYVSDDPMFSKS 185

Query: 454 LLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L    T      W  L N   G +A   D   V+    +        I++P   P   T
Sbjct: 186 FLTSMFTVTLCCMWPTLINTAVGVAAVEKDLLNVSKVLQLGWMTHVMKIVIPSAIPLMFT 245

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           G   + G AW   I +E+ +      +  GLG ++ +  + GS
Sbjct: 246 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 282


>gi|104774103|ref|YP_619083.1| glycine betaine ABC transporter, substrate binding / permease
           protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514172|ref|YP_813078.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423184|emb|CAI97982.1| Glycine betaine ABC transporter, substrate binding / permease
           protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093487|gb|ABJ58640.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325125864|gb|ADY85194.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 506

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 25/154 (16%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           L A S+R G V+  I  I+Q+IP L  L   + +  + + P         A+ A+    +
Sbjct: 43  LLAHSKRAGEVVFQITSIIQTIPSLALLGLLIPFVGIGMTP---------ALIALTAYGI 93

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  + Y +L NI  +LEE + +F LS W+K   L  P ++P       M++SG    V
Sbjct: 94  MPIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALP-------MTLSG----V 142

Query: 208 VASEMIVVGD----TVIPLPGIGSYIALAIKEQD 237
             S ++++G      +I   G+G+YI + I++ +
Sbjct: 143 SISLVMIIGTATLAAMIGAGGLGTYIMIGIQQNN 176


>gi|94311790|ref|YP_585000.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355642|gb|ABF09731.1| taurine ABC-type transporter, permease component: TauT family
           [Cupriavidus metallidurans CH34]
          Length = 291

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 12/184 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++A+++ +P+GI++G      +  +PF       PA+ F PL++      
Sbjct: 99  MTVWRVVGGFVLAALLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 158

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I+  V         D  E A +   T     R +++PG  
Sbjct: 159 ETQ-----KLLVIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATPRGIVRRVLIPGAA 213

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 214 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 267

Query: 564 CFVL 567
           C  L
Sbjct: 268 CIGL 271


>gi|323972218|gb|EGB67428.1| inner membrane transport system [Escherichia coli TA007]
          Length = 204

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 12  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 71

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 72  -NSKILLIYLAIFAP---VAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGALPE 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 128 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 164



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 12/148 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L +L+A+VI +            S  +  +L PI+++ + +P L +L   V++F  
Sbjct: 14  TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG E + I  I+ +    +  S    + ++ +     +RS   S  Q  W++ +
Sbjct: 69  ------IG-ENSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVIL 121

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P ++P ++  + + +  GW  +VA+E+I
Sbjct: 122 PGALPEILTGLRIGLGVGWSTLVAAELI 149


>gi|91789128|ref|YP_550080.1| nitrate transport permease [Polaromonas sp. JS666]
 gi|91698353|gb|ABE45182.1| nitrate transport permease [Polaromonas sp. JS666]
          Length = 328

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+I+ IPVG  IG    +S    P   LL       + P  +  + +  
Sbjct: 137 SLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 194

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 195 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSKILFPAVLPY 252

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 253 MLTGVRLAVGTAWLVIVAAEMLTGG 277



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 171 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 222

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 223 PQDYMNVARVLNLSEWKIVSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277


>gi|260596732|ref|YP_003209303.1| taurine transport system permease tauC [Cronobacter turicensis
           z3032]
 gi|260215909|emb|CBA28473.1| Taurine transport system permease protein tauC [Cronobacter
           turicensis z3032]
          Length = 230

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 21/186 (11%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IPVGI +G  P + + + P  +L    P   + PL+V        +  + L  L IF 
Sbjct: 52  IGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETS-KVLLIYLAIFA 110

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  + +AG  +        A S   + W+   Y+ILPG  P  +TG     G  W+
Sbjct: 111 P---VAMSALAGVKSAQQVRIRAAQSLGASRWQLLWYVILPGALPEILTGLRIGLGVGWS 167

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVL-----ALNR 571
             + +E+ +       T GLG ++ +S  +    +VVL    V+ +  F+L     AL R
Sbjct: 168 TLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALTR 220

Query: 572 FL--WH 575
            L  WH
Sbjct: 221 RLTPWH 226



 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P++++ + IP L +L   V++F        IG E + +  I+ +    +  S    +
Sbjct: 69  ILDPLIELYRPIPPLAYLPLMVIWFG-------IG-ETSKVLLIYLAIFAPVAMSALAGV 120

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  +     ++S   S WQ  WY+ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 121 KSAQQVRIRAAQSLGASRWQLLWYVILPGALPEILTGLRIGLGVGWSTLVAAELI 175


>gi|227512913|ref|ZP_03942962.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus buchneri
           ATCC 11577]
 gi|227523041|ref|ZP_03953090.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083913|gb|EEI19225.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus buchneri
           ATCC 11577]
 gi|227089859|gb|EEI25171.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 27/199 (13%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS+ + +++ PILD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG +     + IFA+  T ++ N+       +  +P DL E + S+  + WQK   +
Sbjct: 154 GMVPGVI----ASVIFAMPPTIRMTNL------GIRQVPEDLIEAADSYGSTSWQKLVKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +P +    M G+  +MM+S+S          M+V+  ++I   G+G+ +  A+   D  
Sbjct: 204 QLPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRNDAG 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
           +   A L ++ +  + D++
Sbjct: 253 SGFAAGLAIVILAIILDRI 271


>gi|296101489|ref|YP_003611635.1| sulfonate/nitrate/taurine transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295055948|gb|ADF60686.1| sulfonate/nitrate/taurine transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 275

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++V ++ A II IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLARILVALLAAVIIGIPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRTQVLLFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252

Query: 566 VLALN 570
              L 
Sbjct: 253 AFGLE 257


>gi|240141231|ref|YP_002965711.1| putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens AM1]
 gi|240011208|gb|ACS42434.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens AM1]
          Length = 250

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ +++ IP L ++ F +++F  + P        AA+F I     W + F+   ++ ++ 
Sbjct: 96  IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   G   +   + +P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PGIG+ +  A        ++  MLTM G+  L+D
Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235


>gi|331014291|gb|EGH94347.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 282

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
           G  ++   +      +L A++ +  +  L D LL    R  + W + F
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|257468378|ref|ZP_05632472.1| binding-protein-dependent transport systems inner membrane
           component [Fusobacterium ulcerans ATCC 49185]
 gi|317062651|ref|ZP_07927136.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185]
 gi|313688327|gb|EFS25162.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185]
          Length = 287

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+A+ ISLL  F    L + + R+   + PILD MQ++P+  +L   V++F       V
Sbjct: 103 VLAAVFISLLLGFPIGILISGNERINSFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 162

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           I   + AI  +               +  + +++ E +R+F  + +Q  W + +P ++P 
Sbjct: 163 IATTIYAIVPVIRLT--------SHGIRQVDKEVVEAARAFGSTKFQALWKVQIPQALPT 214

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
              G+   +MM+M+           +VV  ++I   G+G  + + +   ++   L A   
Sbjct: 215 IMTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLIGVNRIEIGRGLVAGTA 263

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLER 274
           ++ V  L D    R    W N+  +++
Sbjct: 264 VVIVAILMD----RITQAWINRSEVKK 286


>gi|319763463|ref|YP_004127400.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|330824290|ref|YP_004387593.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118024|gb|ADV00513.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|329309662|gb|AEB84077.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 279

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 21/203 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A+++ +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 88  MTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 147

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + I+  V         D  E A +   +     R +++PG  
Sbjct: 148 ELQ-----KLLVIFIGSVFQIILMVAVTVGNARKDLVEAAYTLGASSSGIVRRVLIPGAA 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+          +G+G  I +S    +  +++ G++++ 
Sbjct: 203 PDIAETLRLVLGWAWTYVIVAELIG------SASGIGHMITDSQALLNTGQIIFGIIVIG 256

Query: 564 CFVL-------ALNR--FLWHPL 577
              L       A+NR  F W  L
Sbjct: 257 LIGLVSDVLFKAVNRRLFAWSAL 279


>gi|15888234|ref|NP_353915.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15155886|gb|AAK86700.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 302

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 68  TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +++ A +I+++       L  +S RL  ++ P+LD+MQ++P   +L   VV F   
Sbjct: 109 TTLSIVTIATLIAIVIGLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIF--- 165

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV G     I+AI    V  +T S+   L +  R++ E + +F  S  QK + + +P
Sbjct: 166 GIGKVPGLIAVVIYAI--PPVIRLT-SLGIRLVD--REVLEAADAFGSSNGQKLFNVQLP 220

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++P ++  +  ++      VV + M+ VG       G+G  +  AI  Q
Sbjct: 221 LALPTIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQ 263


>gi|283784926|ref|YP_003364791.1| ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282948380|emb|CBG87966.1| ABC transporter, permease component [Citrobacter rodentium ICC168]
          Length = 522

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 24/187 (12%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSR-----------RLGMVLVPILDIMQSIPILGFLTFT 119
            + +AM+ SL   FV   L   S            R G +  P L++++ I +  +L   
Sbjct: 320 ELTAAMLASLGRAFVGGALGIASGLLCGLILALRPRAGKIFTPTLNVLRHIALFAWLPLL 379

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +  N   GK++   LA+ F +F        FS  Q++      L+EV+R  RL    +
Sbjct: 380 TAWVGNDNGGKIVFIALASFFPMF--------FSTLQAVRQRNPQLDEVARVLRLGALTR 431

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P + PG+   + +++   W   + +E  +        PGIGS +  A +  D+ 
Sbjct: 432 LRSLILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSG-----PGIGSLMINAQQLLDMP 486

Query: 240 AILYAML 246
            IL  M+
Sbjct: 487 TILCGMV 493



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  IP LG++   +V F     G   G +LA I     + V  +T +  Q++ ++
Sbjct: 106 PLFYALAQIPTLGWIPLFMVLF-----GIDNGLKLAVII---KTTVVPLTINTQQAVTSV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P  L E  +    S WQ+  +L +P S+PG    + +++S  W  ++  E++   + +
Sbjct: 158 PLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215


>gi|170760783|ref|YP_001786759.1| putative ABC transporter, permease protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169407772|gb|ACA56183.1| putative ABC transporter, permease protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 253

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 5/164 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P  V   ++++ V +  
Sbjct: 68  SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWFKS 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   PY
Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++G +   G  W  S+ SEV S     +    L A    +TE+
Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEE 226


>gi|293395630|ref|ZP_06639913.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
 gi|291421949|gb|EFE95195.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
          Length = 299

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 138 LAQMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 189

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 190 EGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPFVLTGVRLSIGIAWLVIVAAEMLTG 249

Query: 216 G 216
           G
Sbjct: 250 G 250



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 6/151 (3%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP G  +G    ++  + P   LL       + P  +  
Sbjct: 105 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAWLP--IGL 162

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +    P    S   IF  + W ++ N   G +  P D+  VA    ++ W   R I+ 
Sbjct: 163 LLFQRAEPA---STWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILF 219

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           P + P+ +TG   + G AW   + +E+ + G
Sbjct: 220 PAVLPFVLTGVRLSIGIAWLVIVAAEMLTGG 250


>gi|148254013|ref|YP_001238598.1| putative taurine ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146406186|gb|ABQ34692.1| Putative taurine ABC transporter, permease protein [Bradyrhizobium
           sp. BTAi1]
          Length = 282

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 12/149 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           TL  L+ +V +LL   V  TL     A S R   ++ P+L+  + IP L +L   +++F 
Sbjct: 88  TLASLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLVIIWFG 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  IG E A +  I+   + ++  +    L ++  D    +RS   S WQ    + 
Sbjct: 148 -------IG-EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVL 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +P ++P ++  + + +  GW  +VA+E++
Sbjct: 200 LPHALPSILTGIRIGLGTGWATLVAAELV 228



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V  ++ A ++    G+ I   P     I+P  +     P   + PLV   + ++ 
Sbjct: 91  SLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLV---IIWFG 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       L++  G    I+   + G  +   D    A S   + W+    ++LP   P 
Sbjct: 148 IG-EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVLLPHALPS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W   + +E+ +       T GLG  I  +++      VVLG+L++   
Sbjct: 207 ILTGIRIGLGTGWATLVAAELVA------ATRGLGFMIKGASDFLVTDVVVLGILVIAVI 260

Query: 566 VLALN 570
             AL 
Sbjct: 261 AFALE 265


>gi|120610821|ref|YP_970499.1| nitrate ABC transporter inner membrane subunit [Acidovorax citrulli
           AAC00-1]
 gi|120589285|gb|ABM32725.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           citrulli AAC00-1]
          Length = 315

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +  + +  
Sbjct: 124 SLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 181

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 182 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPY 239

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 240 MLTGVRLAVGTAWLVIVAAEMLTGG 264



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 158 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 209

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 210 PQDYMNVARVLNLSEWKIATTILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 264


>gi|260549387|ref|ZP_05823606.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate
           transport system [Acinetobacter sp. RUH2624]
 gi|260407496|gb|EEX00970.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate
           transport system [Acinetobacter sp. RUH2624]
          Length = 253

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I      ++A     S+     L P    ++SIP L ++   +++     
Sbjct: 60  STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    + A F  +T+ V         ++ N+ + L EV + +RL+ +Q+   + +P 
Sbjct: 120 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRVLSIILPA 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + PG++  +  S++  W F++A+E+I  
Sbjct: 172 ASPGILTGLRNSLNLSWMFMIAAELIAA 199



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 25/179 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV+   II S + +   IW+G      + ++P    + + P+  + PL++      
Sbjct: 59  ISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 112

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL +       L+  G  +    N +A          EV   + +  ++    I
Sbjct: 113 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRVLSI 167

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ILP   P  +TG   +   +W   I +E+ +       T G+G  +++  E  S P++V
Sbjct: 168 ILPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 219


>gi|330990546|ref|ZP_08314504.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp.
           SXCC-1]
 gi|329762449|gb|EGG78935.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp.
           SXCC-1]
          Length = 286

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 12/183 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A ++ +P+G  IG RP I   + PF Q+L       + PL    
Sbjct: 93  WQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRRAVDPFIQILRPISPLAWMPL---- 148

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + Y +       + +IF  + W I+ N   G  +   ++  VA +  +   R   +++L
Sbjct: 149 -ALYTIRNAEGCGIFVIFICSLWPIVLNTAFGVGSVRREWLNVARTLEVGWARRVLFVLL 207

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  +TG     G AW A + +E      + + ++G+G ++       S   V+L V
Sbjct: 208 PAAAPTIITGMRIGLGIAWLAIVAAE------MLVGSSGIGYFVWNQWNNLSLSNVLLAV 261

Query: 560 LIM 562
           L++
Sbjct: 262 LLI 264



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + I++ I  L ++   +    N        AE   IF IF   +W +  +    + ++
Sbjct: 132 PFIQILRPISPLAWMPLALYTIRN--------AEGCGIFVIFICSLWPIVLNTAFGVGSV 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            R+   V+R+  +   ++  ++ +P + P ++  M + +   W  +VA+EM+V
Sbjct: 184 RREWLNVARTLEVGWARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEMLV 236


>gi|289627199|ref|ZP_06460153.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648668|ref|ZP_06480011.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868036|gb|EGH02745.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ S + LR+LS  VI      V+A     SR     L P    ++SIP L ++   +++
Sbjct: 79  KHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 138

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  K++   + A F ++ + V         ++  I R L EV + +  S ++    
Sbjct: 139 LGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKLVEVGKMYGFSRYRLTRR 190

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L
Sbjct: 191 ILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GLGYLLSDGRETSRPDIVL 244

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
            A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 245 AAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282



 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|326317800|ref|YP_004235472.1| nitrate ABC transporter inner membrane subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374636|gb|ADX46905.1| nitrate ABC transporter, inner membrane subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 315

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +  + +  
Sbjct: 124 SLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 181

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 182 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPY 239

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 240 MLTGVRLAVGTAWLVIVAAEMLTGG 264



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 158 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 209

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 210 PQDYMNVARVLNLSEWKIATTILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 264


>gi|270264393|ref|ZP_06192659.1| transporter [Serratia odorifera 4Rx13]
 gi|270041529|gb|EFA14627.1| transporter [Serratia odorifera 4Rx13]
          Length = 278

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 21/202 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++V ++ A II +PVGI +G    +   + P  ++    P   + PL+V     
Sbjct: 84  AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A +     W+  R+++LP   
Sbjct: 144 GETS-KILLIYLAIFAP---VALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSAL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560
           P  +TG     G  W+  + +E+ +       T GLG ++ +S  +    +VVL   GV+
Sbjct: 200 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIGVI 252

Query: 561 IMCCFVL-----ALNRFL--WH 575
            +  F L     AL R L  WH
Sbjct: 253 AIIAFGLELGLRALQRRLTPWH 274



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+++I + +P L +L   V++F        IG E + I  I+ +    +  S    +
Sbjct: 117 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVALSAVAGV 168

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   + WQ   ++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 169 RSVAQVRVRAARALGANRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 223


>gi|218532725|ref|YP_002423541.1| ABC transporter inner membrane protein [Methylobacterium
           chloromethanicum CM4]
 gi|254563743|ref|YP_003070838.1| aliphatic sulfonates transport permease ssuC [Methylobacterium
           extorquens DM4]
 gi|218525028|gb|ACK85613.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
 gi|254271021|emb|CAX27028.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens DM4]
          Length = 250

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ +++ IP L ++ F +++F  + P        AA+F I     W + F+   ++ ++ 
Sbjct: 96  IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   G   +   + +P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PGIG+ +  A        ++  MLTM G+  L+D
Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235


>gi|116749077|ref|YP_845764.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698141|gb|ABK17329.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 231

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 14/174 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  ++ I  L ++ F +++F        IG +  A+F IF +  + M  S  ++  +I
Sbjct: 72  PVIQFLRPISPLAWIPFAMLWFG-------IGDK-PALFIIFIASFFPMLISTVKAAASI 123

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +V+ + + S W+  +Y+ +P  +PG+V  + +++   W  VVA+EMI V      
Sbjct: 124 HPMYFQVAANLQFSVWESVYYVILPACLPGIVLALRVTLGVSWMVVVAAEMIAVKS---- 179

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
             G+G  I  A     L  ++ AM+T+  +  L D  + +   + + ++RLE+ 
Sbjct: 180 --GLGYLIIDARNALRLDYVVVAMITIGVIGLLLDYFMTKLEGMEAVRWRLEQK 231


>gi|121595153|ref|YP_987049.1| nitrate ABC transporter inner membrane subunit [Acidovorax sp.
           JS42]
 gi|120607233|gb|ABM42973.1| nitrate ABC transporter, inner membrane subunit [Acidovorax sp.
           JS42]
          Length = 313

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 156 PVISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 207

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G     
Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV---- 263

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG ++       ++  IL A+  + GV  L +  L R
Sbjct: 264 --GIGFWVWDEWNNLNVTNILVAIFVIGGVGLLLEWALVR 301



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +  + +  
Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLP--IGLLVFKG 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 180 ANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262


>gi|86136960|ref|ZP_01055538.1| putative nitrate transporter [Roseobacter sp. MED193]
 gi|85826284|gb|EAQ46481.1| putative nitrate transporter [Roseobacter sp. MED193]
          Length = 357

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 21/216 (9%)

Query: 368 VNHFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           V H TY         IW    T+F      +I S+I IP+GI  G  P  ++ I P  Q+
Sbjct: 135 VRHRTYTGKPTYYQQIWTSIKTVF---FGFLIGSVIAIPLGIMAGLSPTANAAINPIIQI 191

Query: 425 LAAFPANVFFPLVVSCVSY-YHLNPNLWLSLLMIFG------TQWYILFNVIAGASAFPN 477
                   + P+V   VS  Y  N  L+    ++        + W  L N   G ++   
Sbjct: 192 FKPVSPLAWLPIVTMVVSAVYATNDGLFSKSFLVSAITVTLCSLWPTLINTALGVASIDK 251

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D   V+    ++ +     ++LP   P   TG   + G  W   I +E+ +      +  
Sbjct: 252 DLISVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNP 305

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG ++ +  + GS     L  +++  F + +  FL
Sbjct: 306 GLGKFVWDEFQNGSSQS--LAKIMVAVFTIGIIGFL 339



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  VS+  ++S + K   L +P ++P +   + +S+  GW  
Sbjct: 235 LWPTLINTALGVASIDKDLISVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMV 294

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +    Q L  I+ A+ T+  + FL D+++F
Sbjct: 295 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVFTIGIIGFLLDRIMF 345


>gi|330503532|ref|YP_004380401.1| nitrate ABC transporter inner membrane subunit [Pseudomonas
           mendocina NK-01]
 gi|328917818|gb|AEB58649.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina NK-01]
          Length = 264

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP+G  IG    ++  + P   LL       + P  +  + +  
Sbjct: 76  SLGRVGVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLP--IGLLVFEA 133

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P    S+ +IF  + W I+ N  AG ++ P D+  VA    ++  +    I+ P + P
Sbjct: 134 AGPA---SIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSECKVLTRILFPAVLP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G AW   + +E+ + G       GLG ++ +     +   +++ ++I+  
Sbjct: 191 HLMTGIRLAIGVAWLVIVAAEMLTGG------IGLGFWVWDEWNNLNVEHILIAIIIVGL 244

Query: 565 FVLALNRFL 573
             LAL + L
Sbjct: 245 VGLALEQML 253



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F    P        A+I+ IF S +W +  +  
Sbjct: 104 LAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP--------ASIWVIFISSIWPIILNTA 155

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++P+D   V+R  +LS  +    +  P  +P L+  + +++   W  +VA+EM+  
Sbjct: 156 AGVASVPQDYLNVARVLKLSECKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTG 215

Query: 216 G 216
           G
Sbjct: 216 G 216


>gi|188583848|ref|YP_001927293.1| nitrate ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347346|gb|ACB82758.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           populi BJ001]
          Length = 279

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ IPVG  IG  P +S  + P+ Q+L       + PL +  +    
Sbjct: 91  SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N + G +    ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMVLDQLL 268



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   VW M  +    +    ++   V+R+  +   ++ + + +P + P ++
Sbjct: 149 SSLSAIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ ++L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 262

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 263 VLDQLLAR 270


>gi|53714621|ref|YP_100613.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis YCH46]
 gi|253565126|ref|ZP_04842582.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_2_5]
 gi|265765915|ref|ZP_06093956.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16]
 gi|52217486|dbj|BAD50079.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis YCH46]
 gi|251946591|gb|EES86968.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_2_5]
 gi|263253583|gb|EEZ25048.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16]
 gi|301164117|emb|CBW23673.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis 638R]
          Length = 274

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++L+         A S R   V+ PILD+MQ++P   +L   V++
Sbjct: 83  EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG         +FA     +  +       +  +P+++ E SRSF  + WQ  +
Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            + +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G  V  FT   +L +  +G       T+  V+    +A I+ +P+G+W      
Sbjct: 56  LAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471
               I P   L+   PA V+    +  V ++ L   P ++ ++  IF     I    + G
Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               P +  E + SF  T W+    + LP   P  +TG
Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|329848543|ref|ZP_08263571.1| nitrate ABC transporter, permease protein [Asticcacaulis
           biprosthecum C19]
 gi|328843606|gb|EGF93175.1| nitrate ABC transporter, permease protein [Asticcacaulis
           biprosthecum C19]
          Length = 299

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+  +++++P L +L  ++       P        +A+F IF + +W +  +    + 
Sbjct: 140 LDPMFQVLRTVPPLAWLPISLAMLREAQP--------SALFVIFITSIWPIVINTAVGVR 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           NIP D   VSR  RL   + F+ + +P + P +   + + +   W  +VASEM++ G
Sbjct: 192 NIPVDYINVSRVLRLHPIEFFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGG 248



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   IA+++ +  G +IG        + P  Q+L   P   + P  +S 
Sbjct: 103 WHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLP--ISL 160

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  P+   +L +IF T  W I+ N   G    P D+  V+    +    ++  I+L
Sbjct: 161 AMLREAQPS---ALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIEFFFKIML 217

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEV 526
           P   P+  TG     G +W A + SE+
Sbjct: 218 PAATPHIFTGLRIGVGMSWLAIVASEM 244


>gi|154490975|ref|ZP_02030916.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC
           43184]
 gi|154088723|gb|EDN87767.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC
           43184]
          Length = 271

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+LLF         ++ +   V+ P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTVALVLSSTIIALLFGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P D+ E +RSF  +  Q  + + +P
Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPEDIVEATRSFGATSGQLLFKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +MM++S     VV + MI  G
Sbjct: 199 LALPTIMAGVNQTIMMALS----MVVIAAMISAG 228


>gi|170740515|ref|YP_001769170.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168194789|gb|ACA16736.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 257

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 13/194 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++AS + +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 66  MTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFVSFARYLPASAFVPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G+ + I+  V     A   D  E A +         R +++P   
Sbjct: 126 EMQ-----KLLVIFIGSVFQIVLMVAVAVGAVRRDLVEAAYTLGAGDSGIIRRVLIPATA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I ES    +  +++ G++++ 
Sbjct: 181 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234

Query: 564 CFVLALNRFLWHPL 577
              LA + FL+  L
Sbjct: 235 LIGLA-SDFLFKAL 247


>gi|325916164|ref|ZP_08178448.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325537584|gb|EGD09296.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 490

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++LL       LAA+  RLG V++ +  ++Q++P L    F +  F        IGA+  
Sbjct: 306 LALLIALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI A+F   +  +  + +  L +IPR+L + + +  L  W + W + +P +   +V  + 
Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRVELPLARRTIVAGIQ 417

Query: 198 MS 199
            +
Sbjct: 418 TA 419



 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 39/274 (14%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ-----RVSYMLDIFWFCVVCGVAIGI 359
           +   L+     + +TL  ++    E  +Q  + Q     +    +   W  V    A   
Sbjct: 225 YRKDLAQRAPAMLKTLQGLQGRIDEATMQRLNAQVKLQRQSEAAVAAQWLGVA---ATAH 281

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           A   IG ++ H      L  I LG            +A +I +P+G+    RP +   + 
Sbjct: 282 ADSRIGRLLGHTREHLALVGISLG------------LALLIALPLGVLAARRPRLGQVVL 329

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               +L   P+   F   V  +  + +     ++ L ++ +   I+ N  AG ++ P + 
Sbjct: 330 SLTGVLQTLPSLAVF---VFMIPLFGIGAKPAIAALFLY-SLLPIVRNTHAGLTSIPREL 385

Query: 480 KEVASSFHITGW-RWWRYIILPGIFPYYVTGAITAC----GGAWNASIVSEVASWGH--- 531
           ++ A +  +  W R WR + LP      V G  TA     G A   +++     +G    
Sbjct: 386 RQTAEAIGLPAWTRLWR-VELPLARRTIVAGIQTAAVINVGTATLGALIG-AGGYGQPIL 443

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +R   +G  +     +G+ P  VL +L+   F
Sbjct: 444 TGIRLDDIGLIL-----EGAIPAAVLALLVQAAF 472


>gi|107028845|ref|YP_625940.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116689996|ref|YP_835619.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105898009|gb|ABF80967.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116648085|gb|ABK08726.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 291

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A++  I +G+ IG    +   + P  ++L   PA  + PL +       
Sbjct: 96  SITRVLAGFVAAAVTGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + GA A        A S    G   +  +ILPG  
Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G AW   + +E+ +  +      G+G +  ES    ++P++V+G+ ++
Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+   +   L    LP +   +  R+L+  V + +          + R L   L+P 
Sbjct: 72  APSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIGRYRALEDTLLPP 131

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +  +       +  
Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            L   +RS    G   +  + +P + P +   + + M   WF +V +EMI 
Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234


>gi|255010825|ref|ZP_05282951.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis 3_1_12]
 gi|313148627|ref|ZP_07810820.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137394|gb|EFR54754.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++L+         A S R   V+ PILD+MQ++P   +L   V++
Sbjct: 83  EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG         +FA     +  +       +  +P+++ E SRSF  + WQ  +
Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            + +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G  V  FT   +L +  +G       T+  V+    +A I+ +P+G+W      
Sbjct: 56  LAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471
               I P   L+   PA V+    +  V ++ L   P ++ ++  IF     I    + G
Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               P +  E + SF  T W+    + LP   P  +TG
Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|320324033|gb|EFW80116.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329022|gb|EFW85021.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 283

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|332286228|ref|YP_004418139.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330430181|gb|AEC21515.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 257

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++A+ + IP+G  IG  P +++   P   LL   P +    L +  + +  
Sbjct: 68  SLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLR--PISPLAWLPLGLLLFKA 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    ++ +   + W ++ N   G    P D+  VA   +++  + +  I+LP + PY
Sbjct: 126 SDPAAIWAIFIC--SIWPMIINTADGVKRVPQDYLNVARVLNLSERKIFTRILLPSVLPY 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +TG   + G AW   + +E+ + G      TGLG ++ +     +   +++ VL++
Sbjct: 184 MMTGVRLSIGTAWLVIVAAEMLTGG------TGLGFWLWDEWNNLNVQNILIAVLVI 234



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ AAI+AIF   +W M  +    +  +P+D   V+R   LS  + F  + +P  +P ++
Sbjct: 126 SDPAAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKIFTRILLPSVLPYMM 185

Query: 194 WNMMMSMSGGWFFVVASEMIVVG 216
             + +S+   W  +VA+EM+  G
Sbjct: 186 TGVRLSIGTAWLVIVAAEMLTGG 208


>gi|71733936|ref|YP_274863.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554489|gb|AAZ33700.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 268

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 55  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 106

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 107 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 158

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 159 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 212

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 213 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 267



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 69  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 121

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 122 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 177

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 178 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 230

Query: 559 VLIMCC 564
            +I+  
Sbjct: 231 AIIVLA 236


>gi|301629375|ref|XP_002943818.1| PREDICTED: probable ABC transporter permease protein
           BruAb2_1124-like [Xenopus (Silurana) tropicalis]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           FT  D L+ I    +T++RVV   ++A+ I +P+GI +G    + + ++PF       PA
Sbjct: 71  FTEFDFLHDI---GMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPA 127

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           + F PL++       L       LL+IF G+ + I+  V         D  E A +   T
Sbjct: 128 SAFIPLLILWAGLGELQ-----KLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGAT 182

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                R +++PG  P          G AW   IV+E+         ++G+G  I +S
Sbjct: 183 HGGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 233


>gi|300870088|ref|YP_003784959.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira pilosicoli 95/1000]
 gi|300687787|gb|ADK30458.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira pilosicoli 95/1000]
          Length = 241

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126
           T +R++   V+S L       +A   + +  +L+PI++ +++IP +  +   V++F  NL
Sbjct: 58  TFIRVIVTFVLSFLLAITLGIIAGIFKSVRYILMPIINFIRTIPTIPLILIAVLWFNNNL 117

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P   I   L  IF I    V N        + NI ++L E+S S+ +S   +   L +P
Sbjct: 118 VP---IFVSLFVIFPIIYDAVVN-------GIINIDKNLIEMSNSYNVSFKNQLITLYIP 167

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
              P ++ ++  SM   W  V+ASE+I      +P  G+G+
Sbjct: 168 SIKPYILTSISQSMGMTWKSVLASEII-----TLPTLGLGT 203



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y ++LY       T  RV+V  +++ ++ I +GI  G    +   + P    +   P   
Sbjct: 52  YSNLLY-------TFIRVIVTFVLSFLLAITLGIIAGIFKSVRYILMPIINFIRTIPT-- 102

Query: 433 FFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHIT 489
             PL++  V +++ N  P +++SL +IF     I+++ V+ G      +  E+++S++++
Sbjct: 103 -IPLILIAVLWFNNNLVP-IFVSLFVIFP----IIYDAVVNGIINIDKNLIEMSNSYNVS 156

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                  + +P I PY +T    + G  W + + SE+     I L T GLG  + ES
Sbjct: 157 FKNQLITLYIPSIKPYILTSISQSMGMTWKSVLASEI-----ITLPTLGLGTKLYES 208


>gi|19745348|ref|NP_606484.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           MGAS8232]
 gi|19747452|gb|AAL96983.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS8232]
          Length = 575

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AKS  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|310765617|gb|ADP10567.1| taurine transporter subunit [Erwinia sp. Ejp617]
          Length = 275

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A  I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   + W+   +++LPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250

Query: 564 CFVLALN 570
               AL 
Sbjct: 251 LIAFALE 257



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ ++        L   +  L  +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     +RS   S WQ  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220


>gi|222111494|ref|YP_002553758.1| nitrate ABC transporter inner membrane subunit [Acidovorax ebreus
           TPSY]
 gi|221730938|gb|ACM33758.1| nitrate ABC transporter, inner membrane subunit [Acidovorax ebreus
           TPSY]
          Length = 313

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 156 PVISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 207

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G     
Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV---- 263

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG ++       ++  IL A+  + GV  L +  L R
Sbjct: 264 --GIGFWVWDEWNNLNVTNILVAIFVIGGVGLLLEWALVR 301



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +  + +  
Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLP--IGLLVFKG 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 180 ANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262


>gi|60682640|ref|YP_212784.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis NCTC 9343]
 gi|60494074|emb|CAH08866.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis NCTC 9343]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++L+         A S R   V+ PILD+MQ++P   +L   V++
Sbjct: 83  EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG         +FA     +  +       +  +P+++ E SRSF  + WQ  +
Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
            + +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G  V  FT   +L +  +G       T+  V+    +A I+ +P+G+W      
Sbjct: 56  LAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471
               I P   L+   PA V+    +  V ++ L   P ++ ++  IF     I    + G
Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               P +  E + SF  T W+    + LP   P  +TG
Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|257487776|ref|ZP_05641817.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330985354|gb|EGH83457.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008505|gb|EGH88561.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 283

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  VI      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRNGMSLSWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282



 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG       +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRNGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|163853768|ref|YP_001641811.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163665373|gb|ABY32740.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 250

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ +++ IP L ++ F +++F  + P        AA+F I     W + F+   ++ ++ 
Sbjct: 96  IVRMLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   G   +   + +P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PGIG+ +  A        ++  MLTM G+  L+D
Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235


>gi|88800578|ref|ZP_01116140.1| putative permease [Reinekea sp. MED297]
 gi|88776723|gb|EAR07936.1| putative permease [Reinekea sp. MED297]
          Length = 295

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T++ LS + +  L + V         AKS R+  V+ PILD+MQ++P   +L   V  
Sbjct: 98  EDTMQTLSIITVCTLLSIVLGVPIGIAMAKSNRIQSVITPILDVMQTMPAFVYLIPVV-- 155

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + ++ ++ WQ+ W
Sbjct: 156 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAADAYGVTPWQRLW 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q
Sbjct: 209 NVQLPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLQSITNQ 256


>gi|146307132|ref|YP_001187597.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina ymp]
 gi|145575333|gb|ABP84865.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina ymp]
          Length = 283

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP+G  IG    ++  + P   LL       + P  +  + +  
Sbjct: 95  SLGRVGVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLP--IGLLVFEA 152

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P    S+ +IF  + W I+ N  AG ++ P D+  VA    ++ ++    I+ P + P
Sbjct: 153 AGPA---SIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G AW   + +E+ + G       GLG ++ +     +   +++ ++I+  
Sbjct: 210 HLMTGIRLAIGVAWLVIVAAEMLTGG------IGLGFWVWDEWNNLNVEHILIAIIIVGL 263

Query: 565 FVLALNRFL 573
             LAL + L
Sbjct: 264 VGLALEQTL 272



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F    P        A+I+ IF S +W +  +  
Sbjct: 123 LAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP--------ASIWVIFISSIWPIILNTA 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++P+D   V+R  +LS ++    +  P  +P L+  + +++   W  +VA+EM+  
Sbjct: 175 AGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTG 234

Query: 216 G 216
           G
Sbjct: 235 G 235


>gi|330993876|ref|ZP_08317808.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Gluconacetobacter sp. SXCC-1]
 gi|329759144|gb|EGG75656.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Gluconacetobacter sp. SXCC-1]
          Length = 254

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 27/164 (16%)

Query: 101 VPILD--------IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           VP+LD        +++ IP L ++ F +++F     G        A F I  S  W   +
Sbjct: 90  VPLLDGLLSGVVRVLRPIPGLAWVPFAILWFGLNTAG--------ATFVIAISVFWINFY 141

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           + Y ++ +I  DL EV+ SF   G W +   + +P S PG++  +   +   W  VVA+E
Sbjct: 142 AAYGAVQSIDPDLYEVAASFGHGGFWARLRTVVIPASAPGVLAGLRTGLGQAWMSVVAAE 201

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  V       PGIG+ +   ++   LLA    ++ ML +  LY
Sbjct: 202 LFGV-------PGIGARM---MQASSLLATDLVVVYMLTMALLY 235


>gi|224367278|ref|YP_002601441.1| ABC-type transporter, permease protein (membrane spanning protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223689994|gb|ACN13277.1| ABC-type transporter, permease protein (membrane spanning protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 258

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  N++ G +    +++E++ +       + RY++ PG FP ++TG        W A + 
Sbjct: 136 VFLNLMGGLNTIEKEWQELSETLKFNHAEYIRYVLFPGAFPSFLTGIQLGLSYCWRALMG 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +E+ +        +GLG  I +S E G   +V +G++ +    + L+R L
Sbjct: 196 AEMIA------AASGLGYLILDSQEMGRIDKVFVGIITLGICGIVLDRVL 239


>gi|157371148|ref|YP_001479137.1| nitrate ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322912|gb|ABV42009.1| nitrate ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 298

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 137 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 188

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 189 EGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTG 248

Query: 216 G 216
           G
Sbjct: 249 G 249



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP G  +G    +++ + P   LL       + P  +  
Sbjct: 104 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLP--IGL 161

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +    P    S   IF  + W ++ N   G +  P D+  VA    ++ W   R I+ 
Sbjct: 162 LLFQRAEP---ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILF 218

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           P + PY +TG   + G AW   + +E+ + G
Sbjct: 219 PAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 249


>gi|121610891|ref|YP_998698.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|121555531|gb|ABM59680.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
          Length = 295

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   IA+++ IP+G  +G  P +   + PF Q+L       + PL +  +    
Sbjct: 107 SLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLALYTIKDSS 166

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           ++      + +IF  + W +L N   G ++   D+   A +  +   R    +ILP   P
Sbjct: 167 IS-----GIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVILPAAAP 221

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +TG   + G AW   + +E+   G      TG+G Y+       S   V+  +L++
Sbjct: 222 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLSLTSVIFAILLI 273



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++ IF IF   VW M  +    + ++ RD    +++  +   +K + + +P + P ++
Sbjct: 165 SSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVILPAAAPTIL 224

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG Y+        L ++++A+L ++GV  
Sbjct: 225 TGMRISMGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLSLTSVIFAIL-LIGVTG 277

Query: 254 LYDQLLF 260
           +   L+F
Sbjct: 278 MLLDLVF 284


>gi|294341848|emb|CAZ90277.1| putative Nitrate transport permease protein nrtB [Thiomonas sp.
           3As]
          Length = 285

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++RVV+  ++A+ I +P+GI+IG      + +QP    +   PA+ F PLV+  V   
Sbjct: 94  ISIYRVVMGFVLAAAIGVPLGIYIGAYKWFEALLQPVNDFVRYMPASAFIPLVLLWVGIG 153

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +      + +IF G  + I+  V       P ++ EVA +         + +I  GI 
Sbjct: 154 EGS-----KIAIIFIGVIFQIIVMVADAVRRVPENYLEVAYTMGARQGEVMQLVIWRGIL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +       G AW   +V+E+ +        +GLG  I +S    + P++ +G+ I+
Sbjct: 209 PELLDILRINMGWAWTYLVVAEMVA------ANSGLGFQILQSQRFLNTPKIFVGIFII 261


>gi|237723326|ref|ZP_04553807.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_2_4]
 gi|293373152|ref|ZP_06619514.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|298480784|ref|ZP_06998980.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. D22]
 gi|229447848|gb|EEO53639.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_2_4]
 gi|292631800|gb|EFF50416.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|298273218|gb|EFI14783.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. D22]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   +L P+LD+MQ++P   +L   V++F            L A+  +F + ++ M
Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159

Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
              +  +   +  +P+++ E SRSF  + WQ  + + +P ++P    G+   +MMS+S  
Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217

Query: 204 WFFVVASEMIVVGD 217
              VV + MI  G 
Sbjct: 218 --MVVIAAMIAAGG 229



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G     FT   +L +  +G       T+  V     +A I+ +P+G+W    P 
Sbjct: 56  LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|170021256|ref|YP_001726210.1| taurine transporter subunit [Escherichia coli ATCC 8739]
 gi|194438856|ref|ZP_03070941.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|253774648|ref|YP_003037479.1| taurine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160436|ref|YP_003043544.1| taurine transporter subunit [Escherichia coli B str. REL606]
 gi|297516855|ref|ZP_06935241.1| taurine transporter subunit [Escherichia coli OP50]
 gi|300930341|ref|ZP_07145753.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|169756184|gb|ACA78883.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|194422150|gb|EDX38152.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|242376149|emb|CAQ30838.1| tauC, subunit of taurine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325692|gb|ACT30294.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972337|gb|ACT38008.1| taurine transporter subunit [Escherichia coli B str. REL606]
 gi|253976546|gb|ACT42216.1| taurine transporter subunit [Escherichia coli BL21(DE3)]
 gi|300461801|gb|EFK25294.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|309700630|emb|CBI99926.1| taurine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|323938554|gb|EGB34803.1| inner membrane transport system [Escherichia coli E1520]
 gi|323963355|gb|EGB58917.1| inner membrane transport system [Escherichia coli H489]
          Length = 275

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GE-NSKILLIYLAIFAP---VAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 12/148 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L +L+A+VI +            S  +  +L PI+++ + +P L +L   V++F  
Sbjct: 85  TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 139

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG E + I  I+ +    +  S    + ++ +     +RS   S  Q  W++ +
Sbjct: 140 ------IG-ENSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVIL 192

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P ++P ++  + + +  GW  +VA+E+I
Sbjct: 193 PGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|73668564|ref|YP_304579.1| sulfonate ABC transporter permease [Methanosarcina barkeri str.
           Fusaro]
 gi|72395726|gb|AAZ69999.1| sulfonate ABC transporter, permease protein [Methanosarcina barkeri
           str. Fusaro]
          Length = 261

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           + +   + PI++I++ IP + ++ F +++F   +         AA F +F   V+ +  +
Sbjct: 92  KEINRAIDPIIEILRPIPPIAWIPFAIIWFGLTHQ--------AAGFVVFAGMVFPIIIN 143

Query: 154 MYQSLCNIPRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            Y    N+P+   E +R    +       Y+ +P +MP +V  + ++M  GW  +VA+EM
Sbjct: 144 TYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIAMGVGWMCLVAAEM 203



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+GI +G+   I+  I P  ++L   P   + P  +      H      +   M
Sbjct: 77  AFVIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAIIWFGLTHQAAGFVVFAGM 136

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTGAITACG 515
           +F     I+ N   G    P  + E A     T      RYI +P   P  V G   A G
Sbjct: 137 VFP----IIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIAMG 192

Query: 516 GAWNASIVSEV 526
             W   + +E+
Sbjct: 193 VGWMCLVAAEM 203


>gi|206577350|ref|YP_002238921.1| putative sulfonate ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|206566408|gb|ACI08184.1| putative sulfonate ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
          Length = 522

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  IP LG++   +V F     G   G +LA I     + V  MT +  Q++ ++
Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMTINTQQAVASV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P+ L E  R    S WQ+  +L +P S+PG    + +++S  W  ++  E++   + +
Sbjct: 158 PQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R G +  P L++++ I +  +L     +  N   GK++   LA+ F +F        FS 
Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            Q++      L+EV+R  RL  + +   + +P + PG+   + +++   W   + +E  +
Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                    GIGS +  A +  D+  IL  M+
Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493


>gi|295085035|emb|CBK66558.1| ABC-type proline/glycine betaine transport system, permease
           component [Bacteroides xylanisolvens XB1A]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   +L P+LD+MQ++P   +L   V++F            L A+  +F + ++ M
Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159

Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
              +  +   +  +P+++ E SRSF  + WQ  + + +P ++P    G+   +MMS+S  
Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217

Query: 204 WFFVVASEMIVVGD 217
              VV + MI  G 
Sbjct: 218 --MVVIAAMIAAGG 229



 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G     FT   +L +  +G       T+  V     +A I+ +P+G+W    P 
Sbjct: 56  LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|160881959|ref|YP_001560927.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
 gi|160430625|gb|ABX44188.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
          Length = 286

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           N ++ +S LM+      I  NV+ G  +      E+A+ FH++G R  ++I LP + PY+
Sbjct: 150 NLSILISFLMVLPI---IYTNVLKGVESADQGLLEMAAVFHMSGLRKLKFIYLPAVMPYF 206

Query: 507 VTGAITACGGAWNASIVSEV 526
           V+      G  W + I +EV
Sbjct: 207 VSACSVGLGFCWKSGIAAEV 226


>gi|148259997|ref|YP_001234124.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|326403047|ref|YP_004283128.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146401678|gb|ABQ30205.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|325049908|dbj|BAJ80246.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 286

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA    L  +L P+LD+MQ++P   +L  T+V F +   PG      L +          
Sbjct: 125 AAHHPTLYRILRPVLDLMQTLPTFVYLIPTLVLFGLGSVPG------LISTVVFVVPTPV 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T   Y  + N+PR L E  ++F  S W+  W + +P +MP    GL   +M+S+S   
Sbjct: 179 RLT---YVGIVNVPRPLIEAGQAFGASPWELLWKVEIPAAMPTILAGLTQVIMLSLS--- 232

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             VV + ++  G       G+G  +  A++   +     + L ++ V  + D+ +FRP
Sbjct: 233 -MVVIAALVGAG-------GLGEPVVEAMETVQIGRGFTSGLAIVIVAVILDR-VFRP 281


>gi|261856785|ref|YP_003264068.1| nitrate ABC transporter inner membrane subunit [Halothiobacillus
           neapolitanus c2]
 gi|261837254|gb|ACX97021.1| nitrate ABC transporter, inner membrane subunit [Halothiobacillus
           neapolitanus c2]
          Length = 280

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A I+ IP+G  IG  P +   + P+ QLL       + PL +  +   +
Sbjct: 92  SLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALYTIKDAN 151

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     S+ +IF  + W ++ N   G ++   D+  VA +  +T  +    +ILP   P
Sbjct: 152 AS-----SIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAP 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +TG   + G AW   + +E+   G      TG+G ++
Sbjct: 207 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFV 239



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A  ++IF IF   +W M  +    + ++ +D   V+++  ++  +    + +P + P ++
Sbjct: 150 ANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAPTIL 209

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG ++       +L  +++A+  M+GV+ 
Sbjct: 210 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLNLANVIFAIF-MIGVVG 262

Query: 254 LYDQLLF 260
           +    +F
Sbjct: 263 MLLDAIF 269


>gi|134293652|ref|YP_001117388.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134136809|gb|ABO57923.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 295

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + +LF FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVLFAFVLTSLAVSTRAGRDVLSMLTSMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ LSG ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLSGLRQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|237713750|ref|ZP_04544231.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409343|ref|ZP_06085886.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22]
 gi|294805993|ref|ZP_06764860.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446197|gb|EEO51988.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262352795|gb|EEZ01892.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22]
 gi|294446875|gb|EFG15475.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   +L P+LD+MQ++P   +L   V++F            L A+  +F + ++ M
Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159

Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
              +  +   +  +P+++ E SRSF  + WQ  + + +P ++P    G+   +MMS+S  
Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217

Query: 204 WFFVVASEMIVVGD 217
              VV + MI  G 
Sbjct: 218 --MVVIAAMIAAGG 229



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G     FT   +L +  +G       T+  V     +A I+ +P+G+W    P 
Sbjct: 56  LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|241113176|ref|YP_002973011.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861384|gb|ACS59050.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 295

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 17/193 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    V+S+        L A+S RL  V+ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTVLSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     I+AI    ++ ++   +      + +D+ E + +F  S  QK + + +
Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSSSQKLFKVQL 212

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  
Sbjct: 213 PLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNG 265

Query: 246 LTMLGVIFLYDQL 258
           L ++G+  ++D++
Sbjct: 266 LAIVGIAIIFDRV 278


>gi|160886481|ref|ZP_02067484.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483]
 gi|156108366|gb|EDO10111.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   +L P+LD+MQ++P   +L   V++F            L A+  +F + ++ M
Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159

Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
              +  +   +  +P+++ E SRSF  + WQ  + + +P ++P    G+   +MMS+S  
Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217

Query: 204 WFFVVASEMIVVGD 217
              VV + MI  G 
Sbjct: 218 --MVVIAAMIAAGG 229



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +AW   G     FT   +L +  +G       T+  V     +A II +P+G+W    P 
Sbjct: 56  LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIIGVPLGVWTANSPR 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               ++P   L+   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P +  E + SF  T W+    + LP   P  +TG
Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207


>gi|39935182|ref|NP_947458.1| nitrate transport system permease [Rhodopseudomonas palustris
           CGA009]
 gi|39649033|emb|CAE27554.1| possible nitrate transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 279

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A ++ IP+G  IG  P ++  + PF Q+L       + PL +  +    
Sbjct: 91  SIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMLLDQVL 268



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 14/191 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+++  ++++L       L   S  +   L P + +++ I  L ++   +    +     
Sbjct: 94  RVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKD----- 148

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              + L+AIF IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P
Sbjct: 149 ---SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M +S+   W  +VA+EM+V G       GIG ++        ++ ++ A+L +  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGL 259

Query: 251 VIFLYDQLLFR 261
           V  L DQ+L R
Sbjct: 260 VGMLLDQVLAR 270


>gi|66045751|ref|YP_235592.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256458|gb|AAY37554.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330971226|gb|EGH71292.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 282

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS   I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + + LS ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   + ++ +R  R I+
Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|311280742|ref|YP_003942973.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308749937|gb|ADO49689.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 275

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A++I +PVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLTRIVIALLAATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSVQQVRLRAAQSLGASRAQILWFVILPGALPD 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|239814868|ref|YP_002943778.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801445|gb|ACS18512.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 257

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +TTL  L    +++L     A + A SR +   + P+L   QSIP +      VV+F   
Sbjct: 61  KTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P KVI A L   F +  S V  M F       ++  D+ +++RS   S  Q F+ + +
Sbjct: 121 IFP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +S++      +A    VVG+ V    GIG  + +A    DL  +  A+
Sbjct: 172 PQAMPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAAL 225

Query: 246 --LTMLGVI-FLYDQLLFRPMIVWSNKFR 271
             L+ +GVI F+   ++ R MI W    R
Sbjct: 226 VVLSSIGVILFVAVDIVERVMIPWHASQR 254


>gi|253997022|ref|YP_003049086.1| nitrate ABC transporter inner membrane subunit [Methylotenera
           mobilis JLW8]
 gi|253983701|gb|ACT48559.1| nitrate ABC transporter, inner membrane subunit [Methylotenera
           mobilis JLW8]
          Length = 280

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F    P        AAI+ IF S VW M  +    +  +
Sbjct: 127 PVISLLRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAVWPMIINTAVGVNKV 178

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V++   LS W+    +  PF +P ++  + +S+   W  +VA+EM+  G
Sbjct: 179 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 233



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A++I IP+G  IG    ++    P   LL       + P  +  + +   NP    ++ 
Sbjct: 103 LAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLP--IGLLVFKAANPA---AIW 157

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +IF    W ++ N   G +  P D+  VA   +++ W+    I+ P + PY +TG   + 
Sbjct: 158 VIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSI 217

Query: 515 GGAWNASIVSEVASWG 530
           G AW   + +E+ + G
Sbjct: 218 GVAWLVIVAAEMLTGG 233


>gi|326317135|ref|YP_004234807.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373971|gb|ADX46240.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 289

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+    +A+++ +P+GI +G    + + ++PF       PA+ F PL++      
Sbjct: 98  MTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 157

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + I+  V     +   D  E A +   T     R +++PG  
Sbjct: 158 ELQ-----KLLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIVRRVLIPGAA 212

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P+         G AW   IV+E+         ++G+G  I +S
Sbjct: 213 PHIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 249


>gi|308186604|ref|YP_003930735.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1]
 gi|308057114|gb|ADO09286.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1]
          Length = 290

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          AE AA + IF   +W M  +  + +  I
Sbjct: 136 PIIALLRPVSPLAWLPIGLLLFQR--------AEPAASWTIFICSIWPMIINTAEGVQRI 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     + +P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 188 PQDYLNVARVLQLSEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 242



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    ++    P   LL       + P  +  + +  
Sbjct: 102 SLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLP--IGLLLFQR 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+LP + P 
Sbjct: 160 AEPAA--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLPAVLPA 217

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 218 VLTGVRLSIGIAWLVIVAAEMLTGG 242


>gi|310767201|gb|ADP12151.1| Aliphatic sulfonates transport permease protein [Erwinia sp.
           Ejp617]
          Length = 263

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 24/190 (12%)

Query: 95  RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   + +++++P L  +   +++F      K+    L  +F I+         +
Sbjct: 91  RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        +
Sbjct: 143 TWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TL 196

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W 
Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253

Query: 268 NKFRLERTTG 277
             ++L+    
Sbjct: 254 PAYQLKEENA 263



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERVWLRWHPAY 256


>gi|254487030|ref|ZP_05100235.1| nitrate ABC transporter, permease component [Roseobacter sp.
           GAI101]
 gi|214043899|gb|EEB84537.1| nitrate ABC transporter, permease component [Roseobacter sp.
           GAI101]
          Length = 357

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 20/198 (10%)

Query: 77  VISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY- 127
           + ++ F F+ A+L        A  S+     L P++ I + +  L +L    +    +Y 
Sbjct: 154 IKTVFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYA 213

Query: 128 --PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G    + L +   +    +W    +    + +I +DL  VSR  +++ W K   L +
Sbjct: 214 SNDGMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVL 273

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242
           P ++P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+
Sbjct: 274 PSALPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIM 327

Query: 243 YAMLTMLGVIFLYDQLLF 260
            A+ T+  + FL D+++F
Sbjct: 328 VAVFTIGIIGFLLDRVMF 345



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453
           +IAS++ IP+GI  G     ++ + P  Q+        + P+V   VS  Y  N  ++  
Sbjct: 162 LIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYASNDGMFSK 221

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G S+   D   V+    +  W     ++LP   P   
Sbjct: 222 SFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LAKIMVAVFTI 333

Query: 568 ALNRFL 573
            +  FL
Sbjct: 334 GIIGFL 339


>gi|154496978|ref|ZP_02035674.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC
           29799]
 gi|150273802|gb|EDN00919.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC
           29799]
          Length = 249

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++S + +   N ++ +S LM+    +     V+ G  A  +   E+A  F I   R  R
Sbjct: 106 IILSLILFSSRNLSILISFLMVLPVLYS---GVLGGIRAMDSQMLEMAQLFRIPTLRRIR 162

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ LP + PY+    ++A G  W + I +EV     I + T  +G  + ++      P++
Sbjct: 163 YVYLPQVLPYFQAACVSALGLCWKSGIAAEV-----IGMPTGSIGERLQQAKVYLDTPDL 217

Query: 556 VLGVLIMCCFVLALNRF 572
               L++    L   RF
Sbjct: 218 FAWTLVIVLVSLLFERF 234


>gi|192290788|ref|YP_001991393.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192284537|gb|ACF00918.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 279

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A ++ IP+G  IG  P ++  + PF Q+L       + PL +  +    
Sbjct: 91  SIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMLLDQVL 268



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 14/191 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+++  ++++L       L   S  +   L P + +++ I  L ++   +    +     
Sbjct: 94  RVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKD----- 148

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              + L+AIF IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P
Sbjct: 149 ---SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M +S+   W  +VA+EM+V G       GIG ++        ++ ++ A+L +  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGL 259

Query: 251 VIFLYDQLLFR 261
           V  L DQ+L R
Sbjct: 260 VGMLLDQVLAR 270


>gi|114705138|ref|ZP_01438046.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Fulvimarina pelagi HTCC2506]
 gi|114539923|gb|EAU43043.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Fulvimarina pelagi HTCC2506]
          Length = 280

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA ++ +         AA   ++   L P+LD+MQ++P   +L   +V+
Sbjct: 91  EEMTESLTLVLSACIVCMAIGVPIGIAAAHRPKVYAFLQPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG      LA +  +  + +  +T   Y  + + P+ L E + +F  +G QK W
Sbjct: 151 FGIGMVPGL-----LATVIFVLPAPI-RLT---YLGVSSTPKSLLEAADAFGATGSQKLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KVELPYALPQIMAGLNQTIMLSLS 225


>gi|330944591|gb|EGH46545.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 226

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS   I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            EV + + LS ++    + +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAA 223


>gi|310826693|ref|YP_003959050.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612]
 gi|308738427|gb|ADO36087.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612]
          Length = 270

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 11/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+    IA  + + +G   G  P +     P   L+ A P   + P+ +      
Sbjct: 73  ISLLRVLSGFFIAGSLGMIMGFLTGRIPVLKRLFDPVIHLIKAVPGIGWLPIAIVWFGVG 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N    +SL   F     +  N  AGA+A P  + +        G+  +R I+ P  FP
Sbjct: 133 EGNTLFLMSLAAFF----PVYVNTAAGAAAIPEMYIQAGQMLGAQGFGLFRAIVFPAAFP 188

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G     G AW   ++ EV         T GLGA ++++   G   E+VL  +I+  
Sbjct: 189 QAAVGLRLGLGVAWAYLVLGEVTG------VTKGLGAIMSDARMLGHV-EMVLTAMIVIA 241

Query: 565 FVLALNRFL 573
               +  FL
Sbjct: 242 VAAKVTDFL 250


>gi|260223152|emb|CBA33430.1| Nitrate transport permease protein nrtB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 312

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IPVG  IG    +S    P   LL       + P  +  + +  
Sbjct: 121 SLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 178

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 179 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 236

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 237 MLTGVRLAVGTAWLVIVAAEMLTGG 261



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 155 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 206

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 207 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 261


>gi|259908898|ref|YP_002649254.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224964520|emb|CAX56030.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478892|emb|CAY74808.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           pyrifoliae DSM 12163]
          Length = 263

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 24/190 (12%)

Query: 95  RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   + +++++P L  +   +++F      K+    L  +F I+         +
Sbjct: 91  RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        +
Sbjct: 143 TWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGALPSIMVGVRFALGLMWL------TL 196

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W 
Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253

Query: 268 NKFRLERTTG 277
             ++L+    
Sbjct: 254 PAYQLKEENA 263



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERVWLRWHPAY 256


>gi|28870234|ref|NP_792853.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213970351|ref|ZP_03398480.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301381134|ref|ZP_07229552.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302058923|ref|ZP_07250464.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302132547|ref|ZP_07258537.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853480|gb|AAO56548.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213924822|gb|EEB58388.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331015472|gb|EGH95528.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 321

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 43/238 (18%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL + L+++V  ++       L A+S RL  VL P LD MQ++P   +L   V+ F   
Sbjct: 100 TTLSLVLTSLVFCVVIGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVYLVPVVMLF--- 156

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G  +  IF++    V      + Q    +P D  E +R+F  +  Q  + + +P
Sbjct: 157 GIGNVPGVLVTIIFSV-APLVRLTNLGIRQ----VPEDKVEAARAFGCTRRQMLFKVQLP 211

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAI 241
            + P    GL   +M+S+S     VV + MI VG       G+G  +   I   D+ LA 
Sbjct: 212 LAAPTIMAGLNQALMLSLS----MVVIASMISVG-------GLGLMVLRGIGRLDMGLAT 260

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNK----------------FRLERTTGIYPADS 283
           +  +  +L  IFL    L + M   SNK                F+L++ T   PA +
Sbjct: 261 VGGVGLVLLAIFL--DRLTQAMGERSNKAVNGEHWYQTGPVGIVFKLKKKTASTPAGA 316


>gi|302873274|ref|YP_003841907.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|307688559|ref|ZP_07631005.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|302576131|gb|ADL50143.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
          Length = 253

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D +   ++G I+++R  V   IA+I  I +G+  G+       I P  Q+L       +
Sbjct: 50  EDKILFKYIG-ISLYRFAVGYFIAAIFAIALGLIFGWYKKAWDIIDPIVQVLRPVSPIAW 108

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWR 492
           FP +V      +L      ++++IF   ++ IL + +         + +VAS+F I G +
Sbjct: 109 FPFIVIIFGIGNLP-----AIVIIFIAAFFPILLSTVTAVKNIEKSYLKVASNFEIKGLK 163

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               I+LP IFPY       A G AW   +  E+          +GLG  I ++
Sbjct: 164 LMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMVG------AQSGLGYLIIDA 211



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/177 (19%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 39  IQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
           + +T++P   ++V  +   ++   L +Y   +  R      I+ +F      +    ++ 
Sbjct: 30  VGKTSIPSPLEVVKAIKDMIEDKILFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKA 89

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             ++ PI+ +++ +  + +  F V+ F        IG  L AI  IF +  + +  S   
Sbjct: 90  WDIIDPIVQVLRPVSPIAWFPFIVIIFG-------IG-NLPAIVIIFIAAFFPILLSTVT 141

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           ++ NI +   +V+ +F + G +    + +P   P +   M +++   W F+VA EM+
Sbjct: 142 AVKNIEKSYLKVASNFEIKGLKLMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMV 198


>gi|304397577|ref|ZP_07379454.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB]
 gi|304354749|gb|EFM19119.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB]
          Length = 290

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          AE AA + IF   +W M  +  + +  I
Sbjct: 136 PIIALLRPVSPLAWLPIGLLLFQR--------AEPAASWTIFICSIWPMIINTAEGVQRI 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     + +P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 188 PQDYLNVARVLQLSEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 242



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    ++    P   LL       + P  +  + +  
Sbjct: 102 SLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLP--IGLLLFQR 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+LP + P 
Sbjct: 160 AEPAA--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLPAVLPA 217

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 218 VLTGVRLSIGIAWLVIVAAEMLTGG 242


>gi|258405766|ref|YP_003198508.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257797993|gb|ACV68930.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 259

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 17/174 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R++    +++LF        A S+R   +  P+++  + +P++  +  T++YF    
Sbjct: 68  STYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPLTLLYFG--- 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +      IF    + +   +  S+  +P DL   + +   S  Q +  +  P 
Sbjct: 125 ----IG-DAQKFVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQSYRLVLFPG 179

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++PG++ N+ +++   W ++V +E++          G+G  I   ++ Q  LAI
Sbjct: 180 ALPGILDNLRITIGWAWTYLVVAELVAANS------GLGYMI---LRAQRFLAI 224



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 28/143 (19%), Positives = 63/143 (44%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +RV+V   +A +  +P+G+ I      ++   P  +     P     PL    + Y+ 
Sbjct: 68  STYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPL---TLLYFG 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +  +    +++  GT + ++  V+   +A P D    A++   +  + +R ++ PG  P 
Sbjct: 125 IG-DAQKFVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQSYRLVLFPGALPG 183

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
            +       G AW   +V+E+ +
Sbjct: 184 ILDNLRITIGWAWTYLVVAELVA 206


>gi|251783394|ref|YP_002997699.1| glycine betaine-binding protein/glycinebetaine transport system
           permease [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242392026|dbj|BAH82485.1| glycine betaine-binding protein/glycinebetaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|218549967|ref|YP_002383758.1| taurine transporter subunit [Escherichia fergusonii ATCC 35469]
 gi|218357508|emb|CAQ90147.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|325498342|gb|EGC96201.1| taurine transporter subunit [Escherichia fergusonii ECD227]
          Length = 275

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+++ +I A +I IP G+ +G  P I   + P  +L    P   + PL+V       
Sbjct: 83  SMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + L  L IF     +  + +AG  +        A S      +   Y+ILPG  P 
Sbjct: 143 -TPKVLLIWLAIFAP---LTMSALAGVQSVQQVRIRAAQSLGANRVQVLWYVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252

Query: 564 CFVL-----ALNRFL--WH 575
            F+L     AL R L  WH
Sbjct: 253 AFLLELSLRALQRRLTPWH 271



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A++ +++           S  +  +L PI+++ + +P L +L   V++
Sbjct: 78  QHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+   LA IFA        +T S    + ++ +     ++S   +  Q  WY
Sbjct: 138 FGIGETPKVLLIWLA-IFA-------PLTMSALAGVQSVQQVRIRAAQSLGANRVQVLWY 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|330965303|gb|EGH65563.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 282

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
           G  ++   +      +L A++ +  +  L D LL    R  + W + F
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|331698281|ref|YP_004334520.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952970|gb|AEA26667.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 300

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 15/227 (6%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W S   +V       VL ++W    ++ R  V   +A +I +P+G+ +     + + I P
Sbjct: 82  WDSFATVVGD---GQVLSILW---TSISRAFVGFAMALVIAVPLGLLVARVRVVRAAIGP 135

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L + P+  + P   + V ++ L  +  +  +++ G+   I   +++G    P  F 
Sbjct: 136 LLSGLQSLPSVAWVP---AAVLWFGLTDST-IYFVVLAGSIPSIANGLVSGIDQIPPIFP 191

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V      +G    R+I+LP   P ++ G       +W + + +E+ + G   L   GLG
Sbjct: 192 RVGKVIGASGLATARHILLPAALPGFLAGCKQGWAFSWRSLMAAEIIAAG--PLLGIGLG 249

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           A++ E ++    P+V+  + ++    + +   ++ P+     R LR+
Sbjct: 250 AFLKEGSDFNDMPKVIAAIFLILVVGIGIELLIFRPIE---RRVLRV 293


>gi|282897797|ref|ZP_06305794.1| Nitrate transport permease [Raphidiopsis brookii D9]
 gi|281197281|gb|EFA72180.1| Nitrate transport permease [Raphidiopsis brookii D9]
          Length = 265

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+V ++IA  + +P+GI++G    +        QL+       + P+ V  +    
Sbjct: 77  SLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVRMISPLSWMPIAVMVLGIGD 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     LS+  I    W ++ N  AG +A    +  ++ S   T W     +I+P I P+
Sbjct: 137 LPVYFLLSISAI----WAVILNTSAGVTAVDTQWLLLSKSLCATKWETISQVIIPAIIPH 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +TG   A G  W   + +E+           GLG +I ++ ++ ++ E+   ++I+
Sbjct: 193 LLTGIRLAMGVIWIVLVPAEMLG------VNAGLGYFILDTRDRLAYSELAAVIVII 243


>gi|21229643|ref|NP_635560.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766519|ref|YP_241281.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21111122|gb|AAM39484.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571851|gb|AAY47261.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 490

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++L+       LAA+  RLG V++ +  ++Q++P L    F +  F        IGA+  
Sbjct: 306 LALVMALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI A+F   +  +  + +  L +IPR+L + + +  L  W + W + +P +   +V  + 
Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQ 417

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +       V+      +G  +I   G G  I   I+  D+  IL   +    V+ L  Q
Sbjct: 418 TAA------VINVGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIPA-AVLALLVQ 469

Query: 258 LLFRPMIVWSN 268
            LF  +  W+ 
Sbjct: 470 ALFEGLERWAT 480


>gi|316934735|ref|YP_004109717.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
 gi|315602449|gb|ADU44984.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 279

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++A  + IP+G  IG  P ++  + PF Q+L       + PL +  +    
Sbjct: 91  SIARVMIGYLLAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 151 LS-----AVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V++ +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMLLDQVL 268



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+A+F IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++
Sbjct: 149 SSLSAVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        ++ ++ A+L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGLVGM 262

Query: 254 LYDQLLFR 261
           L DQ+L R
Sbjct: 263 LLDQVLAR 270


>gi|154247972|ref|YP_001418930.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154162057|gb|ABS69273.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 273

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   + + + +P+G+++G    I   I P  Q+L   P   + PL    + ++ 
Sbjct: 80  SLTRVALGFFVGAGLALPLGLFMGSSDTIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A S   +    +R +ILP   PY
Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPY 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++GA    G A+   IV+E+ +         GLG  I E+ E     +++ G+  +   
Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMFTIGLL 249

Query: 566 VLALN 570
            LA++
Sbjct: 250 GLAID 254


>gi|331698798|ref|YP_004335037.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953487|gb|AEA27184.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 276

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V   +II  ++ IP+G+ IG    +    +P   ++ + P  VF P++   + ++ 
Sbjct: 85  TLESVACGMIITVVVGIPLGLLIGRSNTLYGLTEPLVSIMYSVPFVVFLPII---IFWFG 141

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     L +++++   + +L NVIAGA      + +VA+ F        R +  P   P+
Sbjct: 142 IGAEARL-VIVVWSAIFPLLINVIAGARNVDRHYLQVATVFCAPRLLTLRSVTFPATLPF 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G A   +IV+E      + +   GLG  +   T      + +  ++++   
Sbjct: 201 VLAGVRQAVGRALVGAIVAE------LFMGNAGLGYVVQTETSGFKMDDAMAAIVVIAVL 254

Query: 566 VLALNR 571
            + L R
Sbjct: 255 AIVLTR 260


>gi|324114593|gb|EGC08561.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 275

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+++ +I A +I IP G+ +G  P I   + P  +L    P   + PL+V       
Sbjct: 83  SMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + L  L IF     +  + +AG  +        A S      +   Y+ILPG  P 
Sbjct: 143 -TPKVLLIWLAIFAP---LAMSALAGVQSVQQVRIRAAQSLGANRVQVLWYVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252

Query: 564 CFVL-----ALNRFL--WH 575
            F+L     AL R L  WH
Sbjct: 253 AFLLELSLRALQRRLTPWH 271


>gi|319790810|ref|YP_004152450.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593273|gb|ADU34339.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 263

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 22/200 (11%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T  RM+   +++ LF  V       S  +   + P L+ ++ +P    L   +  F
Sbjct: 69  FTQATVGRMVEGWLLASLFGVVLGAAIGVSPAVRAWIQPTLEFIRPLPASALLPLAISIF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L PG V+       F +    +W +  +       +   L EV+R  ++S     W +
Sbjct: 129 -GLNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAYIWKM 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240
           G+P +MP ++  M ++++      +A  + VVG+ +    G+G  I   A A +  D   
Sbjct: 181 GLPNAMPDILAGMRLALT------IALIVAVVGEMIASQSGLGQAILLAARAFRASD--- 231

Query: 241 ILYAMLTMLGVI-FLYDQLL 259
            L+A + +LG+I F+ + LL
Sbjct: 232 -LFAGIVLLGLIGFVSNALL 250



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+V   ++AS+  + +G  IG  P + + IQP  + +   PA+   PL    +S + 
Sbjct: 73  TVGRMVEGWLLASLFGVVLGAAIGVSPAVRAWIQPTLEFIRPLPASALLPL---AISIFG 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           LNP + L  ++ FG  W +L   + G +A      EVA    ++   +   + LP   P 
Sbjct: 130 LNPGMVL-FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAYIWKMGLPNAMPD 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            + G   A       +I   VA  G +    +GLG  I
Sbjct: 189 ILAGMRLAL------TIALIVAVVGEMIASQSGLGQAI 220


>gi|323128141|gb|ADX25438.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|322412777|gb|EFY03685.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|319745717|gb|EFV98014.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus agalactiae ATCC 13813]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS ++  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + +FA+  T +  N+      ++  IP +L E S SF  +  QK + + +P +  
Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|25011877|ref|NP_736272.1| hypothetical protein gbs1838 [Streptococcus agalactiae NEM316]
 gi|77413910|ref|ZP_00790086.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|24413418|emb|CAD47497.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160043|gb|EAO71178.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS ++  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + +FA+  T +  N+      ++  IP +L E S SF  +  QK + + +P +  
Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|160897817|ref|YP_001563399.1| nitrate ABC transporter inner membrane subunit [Delftia acidovorans
           SPH-1]
 gi|160363401|gb|ABX35014.1| nitrate ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 313

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +  + +  
Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W +L N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 180 ANPAAIWTIFIC--SIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 156 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMLINTAVGVQRV 207

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 262


>gi|302340537|ref|YP_003805743.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637722|gb|ADK83149.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 246

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM R V  I++ S+I +P+G+  G    I   + P + LL   P     P+V+      +
Sbjct: 55  TMLRAVTAIVVTSLIAVPLGVAAGRCRLIDRVLSPVSYLLYPIPKVALLPVVMLLFGLGN 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + L L++ F     ++  +   A+  P+ +               RY+I+P   P 
Sbjct: 115 QAKVILLILVLFF----QMMLAIRDAAANIPDQYFTTIEVLGGGPLAKLRYVIIPAGLPR 170

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           YVT      G A  A   SE  +  +      GLG +I +   + ++PE+  G++ M
Sbjct: 171 YVTALRVGTGTALAALFFSETFATHY------GLGFFIMDCWMRINYPEMFAGIIAM 221


>gi|227822582|ref|YP_002826554.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227341583|gb|ACP25801.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 295

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RT   +    VIS++         ++S RL  ++ P+LD+MQ++P   +L   V   M
Sbjct: 100 AMRTISMIFVCTVISIVVGLPIGIAMSRSDRLQRIVSPVLDVMQTMPSFVYLIPVV---M 156

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L  G++ G     I+A+       M       +  + RD+ E + +F  S WQK   + 
Sbjct: 157 LLGIGRIPGLIAVVIYALPP-----MIRLTDLGIRLVDRDVLEAADAFGCSKWQKLRNVE 211

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++ 
Sbjct: 212 LPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFN 264

Query: 245 MLTMLGVIFLYDQL 258
            L ++G+  ++D++
Sbjct: 265 GLAIVGIAIIFDRV 278


>gi|220920372|ref|YP_002495673.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219944978|gb|ACL55370.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 257

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 12/187 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++A+++ +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 66  VTVWRVVGGFLLAAVVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G+ + I+  V         D  E A +   +     R +++P   
Sbjct: 126 EMQ-----KLLVIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I ES    +  +++ G++++ 
Sbjct: 181 PDIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234

Query: 564 CFVLALN 570
              LA +
Sbjct: 235 LIGLASD 241


>gi|188989580|ref|YP_001901590.1| glycine betaine/carnitine/choline-binding ABC transporter
           substrate-binding and permease component [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167731340|emb|CAP49515.1| glycine betaine/carnitine/choline-binding ABC transporter
           substrate-binding and permease component [Xanthomonas
           campestris pv. campestris]
          Length = 490

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++L+       LAA+  RLG V++ +  ++Q++P L    F +  F        IGA+  
Sbjct: 306 LALVMALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI A+F   +  +  + +  L +IPR+L + + +  L  W + W + +P +   +V  + 
Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQ 417

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +       V+      +G  +I   G G  I   I+  D+  IL   +    V+ L  Q
Sbjct: 418 TAA------VINVGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIPA-AVLALLVQ 469

Query: 258 LLFRPMIVWSN 268
            LF  +  W+ 
Sbjct: 470 ALFEGLERWAT 480


>gi|76788447|ref|YP_330414.1| glycine betaine/proline ABC transporter permease/substrate-binding
           protein [Streptococcus agalactiae A909]
 gi|77406685|ref|ZP_00783726.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77412028|ref|ZP_00788356.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|76563504|gb|ABA46088.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptococcus agalactiae A909]
 gi|77161934|gb|EAO72917.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77174704|gb|EAO77532.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS ++  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + +FA+  T +  N+      ++  IP +L E S SF  +  QK + + +P +  
Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|124266119|ref|YP_001020123.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124258894|gb|ABM93888.1| nitrate ABC transporter, permease protein, putative [Methylibium
           petroleiphilum PM1]
          Length = 274

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 4/176 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+     A +I IP+G+ +     +   + P  +LL   P   + P  +     +
Sbjct: 76  LSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASI----IF 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + ++ +   G  + I+ NV+ GA +    + + A +   + W  +R ++LP   P
Sbjct: 132 WPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDIFRRVVLPATLP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             V G+    G  W   + +E+ S G       GLG +I  S   GS+ ++V+G++
Sbjct: 192 SIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYEQIVVGMI 247


>gi|332529362|ref|ZP_08405323.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
 gi|332041160|gb|EGI77525.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
          Length = 325

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IPVG  IG    +S    P   LL       + P  +  
Sbjct: 129 WNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLP--IGL 186

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +   NP    ++ +   + W ++ N   G    P D+  VA    ++ W+    I+ P
Sbjct: 187 LVFKGANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITKILFP 244

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + PY +TG   A G AW   + +E+ + G
Sbjct: 245 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 274



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 168 PIISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 219

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 220 PQDYLNVARVLQLSEWKVITKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 274


>gi|319783050|ref|YP_004142526.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168938|gb|ADV12476.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 257

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 32/235 (13%)

Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLGC-ITMFRVVVLIIIASIIWIPVGI 406
           AW ++G  VN     D L ++            WL   IT++RV    ++AS++ +P+GI
Sbjct: 28  AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDVLITIWRVFGGFLLASVVAVPLGI 87

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465
            +G    + + ++PF       PA+ F PL++       L       LL+IF G+ + I+
Sbjct: 88  AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQIV 142

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             +         D  E A +   T       +I+P   P          G AW   IV+E
Sbjct: 143 LIIAVKVGGTRRDLVEAAYTLGSTNSGIVNRVIMPANAPEIAETLRLVLGWAWTYVIVAE 202

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573
           +         ++G+G  I  S  + +  +++ G++++    L       A NR+L
Sbjct: 203 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 251


>gi|77409771|ref|ZP_00786425.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77171620|gb|EAO74835.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS ++  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + +FA+  T +  N+      ++  IP +L E S SF  +  QK + + +P +  
Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|283131336|dbj|BAI63341.1| glycine betaine-binding protein/glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis]
          Length = 540

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 66  VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 122

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 123 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 176

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 177 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 217


>gi|239932917|ref|ZP_04689870.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291441267|ref|ZP_06580657.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291344162|gb|EFE71118.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 308

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + + +    +L  +W    ++ R ++  ++A  I  P+G+ +     + + + P    
Sbjct: 91  GEVTDAWRQGTLLDYVW---TSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPVLSG 147

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P     V +  LN N  +  +++ G    +   ++AG    P  F     
Sbjct: 148 LQSLPSVAWVP---PAVLWLGLN-NSMMYAVILLGAVPSVANGLVAGIDQIPPLFLRAGR 203

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543
           +   TG R  RY+++P   P Y+ G       +W + + +E +AS   + +   GLG  +
Sbjct: 204 TLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV---GLGQLL 260

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  S  +V L + ++    +A++  ++ PL     R LR
Sbjct: 261 ENGRNNASIAQVFLAIFLILLVGIAIDLLIFSPLE---RRVLR 300


>gi|156933689|ref|YP_001437605.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531943|gb|ABU76769.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LG +  P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 132 LGRMFNPLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTA 183

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 184 EGVKRIPEDYLNVARVLQLSEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTG 243

Query: 216 G 216
           G
Sbjct: 244 G 244



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP+G  IG    +     P   LL       + P  +  + +  
Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLP--IGLLLFQK 161

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRILFPAVLPA 219

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG 244


>gi|304397094|ref|ZP_07378973.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304355243|gb|EFM19611.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 263

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L +++++P L  +   +++F      K+    L  +F I+         + Y  + NI R
Sbjct: 101 LQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGLMWL------TLIVAETISASS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++    ILYA+L  L  +     LL R  + W   ++L+    
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAAL--LLERVWLRWHPAYQLKEENA 263



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566
           G  W   IV+E  S       ++G+G Y+A +  +    +VV+  +I+   +        
Sbjct: 190 GLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAA 242

Query: 567 LALNR--FLWHPLY 578
           L L R    WHP Y
Sbjct: 243 LLLERVWLRWHPAY 256


>gi|83310958|ref|YP_421222.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82945799|dbj|BAE50663.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 294

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 14/187 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R+     +A+I+ +P+GI +G    + S + P  ++L   PA  + P+ +     
Sbjct: 92  AMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSI----- 146

Query: 444 YHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             L P+   S++ I   G+ + IL N + G +A        + S        +R++ LPG
Sbjct: 147 -MLWPSNEESIVFITFLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPG 205

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P+  TG     G AW + I +E+ S         G+G +  E+     + ++VLG+L+
Sbjct: 206 ALPHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYALVQYADIVLGMLL 259

Query: 562 MCCFVLA 568
           +    LA
Sbjct: 260 IGVLGLA 266


>gi|302391229|ref|YP_003827049.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
 gi|302203306|gb|ADL11984.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 287

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 16/153 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +++++V+ L+       L A+SR + ++  P+LD MQ+IP   +L   +++F    
Sbjct: 107 TMASIITSVVVCLILGIPIGILKARSRIIDLITRPMLDFMQTIPPFVYLIPALMFF---G 163

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     +FAI  +    +T   Y  +  +  +L+E  R+F  + WQ  + + +P 
Sbjct: 164 LGNVSGVIATVVFAI--APPIRLT---YLGIKQVSDELKEAGRAFGCTPWQMLYKIELPL 218

Query: 188 SMPGLVWN----MMMSMSGGWFFVVASEMIVVG 216
           ++P ++      +M+S+S     VV + MI  G
Sbjct: 219 ALPSIMMGVNQCIMLSLS----MVVIAAMIGAG 247


>gi|254303281|ref|ZP_04970639.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148323473|gb|EDK88723.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 260

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 16/143 (11%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
            +S+ LG +  PI++ +Q +P + +L   +++  +N  P  +I +   +IF I       
Sbjct: 81  TRSKLLGDIFYPIIEFLQVVPPISWLILAILWLGLNGKPAILIVS--ISIFCI------- 131

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           MT S+  S+ NI + L EV+  F L+ ++K+ Y+ VP   P     +++ +  G   VV 
Sbjct: 132 MTISLVNSINNIDKKLLEVADVFHLTKFKKWKYIIVPSLYPAFETALIVCLGTGVKLVVM 191

Query: 210 SEMIVVGDTVIPLPGIGSYIALA 232
           +E++ +        GIG  I  A
Sbjct: 192 AEVLTIDS------GIGGQITNA 208



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EVA  FH+T ++ W+YII+P ++P + T  I   G      +++EV +        +G+G
Sbjct: 149 EVADVFHLTKFKKWKYIIVPSLYPAFETALIVCLGTGVKLVVMAEVLT------IDSGIG 202

Query: 541 AYIAES 546
             I  +
Sbjct: 203 GQITNA 208


>gi|222055586|ref|YP_002537948.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564875|gb|ACM20847.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 276

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 21/180 (11%)

Query: 95  RLGMVLVPILDI-MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RL   L P++++  Q+ P++  L   +++F+ +        E+A IF I    +W +TFS
Sbjct: 97  RLQQALEPLMELFAQANPVI--LAHIIIFFLGI-------GEVAKIFTICWLCIWPITFS 147

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               + ++   L + +RS  L  WQ F ++ +P S P     + ++    +  ++ASEM+
Sbjct: 148 TIAGIRDVDPQLMKAARSLGLGRWQLFLHVALPASAPSFFTGLRLAAGYAFLMLIASEMM 207

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM----IVWSNK 269
              +      G+G ++ +  +E   +  ++A  T++  + +   LL + +    +VW++ 
Sbjct: 208 GASN------GLG-WLVMQSQENYHIQRIFAGATIITALAVLTDLLLKVLEKRTLVWTDN 260


>gi|260221748|emb|CBA30622.1| Nitrate transport permease protein nrtB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 287

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           HSL    +R  L  L A V+++   FV       S  L   L P + I++ I  L ++  
Sbjct: 98  HSL----ARVGLGFLLACVVAIPLGFVIGM----SPLLHKALDPFIQILKPISPLAWMPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +    +        +  + IF IF   VW M  +    + ++ R+   V+R+  +   +
Sbjct: 150 ALYTIKD--------SSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLR 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L
Sbjct: 202 KAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSL 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +L+A + ++GV+ +   L+F  +  W
Sbjct: 256 TNVLFA-IGVIGVMGMLLDLVFARLQKW 282



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++A ++ IP+G  IG  P +   + PF Q+L       + PL +     Y 
Sbjct: 99  SLARVGLGFLLACVVAIPLGFVIGMSPLLHKALDPFIQILKPISPLAWMPLAL-----YT 153

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +    + +IF  + W +L N   G ++   ++  VA +  +   R    +ILP   P
Sbjct: 154 IKDSSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLRKAFQVILPAAAP 213

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +TG   + G AW   + +E+   G      TG+G ++
Sbjct: 214 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFV 246


>gi|296116706|ref|ZP_06835316.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295976918|gb|EFG83686.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 254

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 26/198 (13%)

Query: 63  QYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Q A R +L   L  +VI  +   +   L      L  +L  ++ +++ IP L ++ F ++
Sbjct: 59  QTAIRDSLTHYLLGLVIGTVLGALVGLLCGAVGALDALLAGVVRVLRPIPGLAWVPFAIL 118

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ-KF 180
           +F     G        A F I  S  W   ++ Y ++ +I  DL EV+ +F   G+  + 
Sbjct: 119 WFGLNTAG--------ATFVIAISVFWINFYAAYGAVQSIDPDLYEVAAAFGHGGFAGRL 170

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDL 238
             + +P S PGL+  +   +   W  VVA+E+  V       PGIG+ +  A ++   DL
Sbjct: 171 MKVVLPASAPGLLAGLRTGLGQAWMSVVAAELFGV-------PGIGARMMQASSLLATDL 223

Query: 239 -------LAILYAMLTML 249
                  +A+LYA+  ML
Sbjct: 224 VVVYMLTMALLYALTDML 241


>gi|223937679|ref|ZP_03629581.1| nitrate ABC transporter, inner membrane subunit [bacterium
           Ellin514]
 gi|223893651|gb|EEF60110.1| nitrate ABC transporter, inner membrane subunit [bacterium
           Ellin514]
          Length = 261

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+    +  PI+ +++ +  L +L   ++ F++   GK   +EL A+F I    +W    
Sbjct: 94  SKTFTKIFDPIIQVLRPVSPLAWLPLGLILFLSF--GKQ-ASELGALFTIAICAMWPTVM 150

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    +  IP+D   V+R  +LS  +  + + +P ++P +     +S+   W  +VA+EM
Sbjct: 151 NTAVGVRAIPQDYLNVARVLKLSRSKTLFKVLIPATLPYMFTGFRLSLGIAWLVIVAAEM 210

Query: 213 IVVGDTVIPLPGIGSYI 229
           +         PG+G ++
Sbjct: 211 LT------GRPGVGGFL 221



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 16/220 (7%)

Query: 361 WQSIG-YIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           WQS   YI+  F       Q +L   W   + + +  VL   A  +  P+G  +G     
Sbjct: 41  WQSSKPYIMEPFAKRGEMDQGILRFTWYSLVLVAKGYVL---ALALGTPIGFCLGLSKTF 97

Query: 415 SSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +    P  Q+L       + PL ++  +S+      L     +     W  + N   G  
Sbjct: 98  TKIFDPIIQVLRPVSPLAWLPLGLILFLSFGKQASELGALFTIAICAMWPTVMNTAVGVR 157

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P D+  VA    ++  +    +++P   PY  TG   + G AW   + +E+ +     
Sbjct: 158 AIPQDYLNVARVLKLSRSKTLFKVLIPATLPYMFTGFRLSLGIAWLVIVAAEMLT----- 212

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G+G ++ +      +  ++L ++++      L+R +
Sbjct: 213 -GRPGVGGFLWQEYNALIYEHIILCIIVIGLVGFVLDRLM 251


>gi|126729376|ref|ZP_01745190.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126710366|gb|EBA09418.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 360

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 18/201 (8%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           IW    T+F   VL   A+++ +P+GI  G  P  ++ I P  Q+        + P+V  
Sbjct: 153 IWTSIQTVFFGFVL---ATLVAVPLGILAGLSPTANAAINPLVQIFKPVSPLAWLPIVTM 209

Query: 440 CVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            VS    N         +  ++ +   + W  L N   G ++   D   V+    +  W 
Sbjct: 210 IVSAAAANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWT 269

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS 
Sbjct: 270 KITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSS 323

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
               L  +++  F + +  FL
Sbjct: 324 SS--LAKIMVAVFTIGIIGFL 342



 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW  
Sbjct: 238 LWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+ T+  + FL D++++
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMY 348


>gi|170742628|ref|YP_001771283.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196902|gb|ACA18849.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 277

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV    I   + +PVG+ +G    +   + P  Q+L   P   + PL    + ++ 
Sbjct: 84  SLGRVVAGFAIGVGLALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPL---AIVWFG 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  GT + +L N IAG     + +   A +     W  +R +ILP   P+
Sbjct: 141 LG-NPPALFLIALGTFFPVLVNTIAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPF 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            + G     G A+   IV+E+ +       + GLG  I E+ E
Sbjct: 200 VLAGMRIGIGTAFIVVIVAEMIAV------SDGLGYRILEARE 236


>gi|332529936|ref|ZP_08405887.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
 gi|332040633|gb|EGI77008.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
          Length = 305

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW+ +          D    I LG  ++ RV +  ++A ++ +P+G  IG  P +   + 
Sbjct: 92  AWKHLSNPFYDNGPNDKGIAIQLGH-SLARVGLGFLLACLVAVPLGFVIGMSPLLRRALD 150

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPND 478
           P+ Q+L       + PL     + Y +  +    + +IF  + W +L N   G +A   D
Sbjct: 151 PYIQVLKPISPLAWMPL-----ALYTIKDSSASGIFVIFICSVWPMLINTAFGVAAVRRD 205

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +  VA++  ++  R    +ILP   P  VTG   + G AW   + +E+   G      TG
Sbjct: 206 WLNVAATLEVSPLRKAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TG 259

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +G ++       S   V+  + ++    + L+
Sbjct: 260 IGYFVWNEWNNLSLSNVIFAITVIGVVGMLLD 291



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 23/202 (11%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           HSL    +R  L  L A ++++   FV       S  L   L P + +++ I  L ++  
Sbjct: 116 HSL----ARVGLGFLLACLVAVPLGFVIGM----SPLLRRALDPYIQVLKPISPLAWMPL 167

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +    +        +  + IF IF   VW M  +    +  + RD   V+ +  +S  +
Sbjct: 168 ALYTIKD--------SSASGIFVIFICSVWPMLINTAFGVAAVRRDWLNVAATLEVSPLR 219

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P + P +V  M +SM   W  +VA+EM+V G       GIG ++        L
Sbjct: 220 KAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSL 273

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +++A +T++GV+ +   LLF
Sbjct: 274 SNVIFA-ITVIGVVGMLLDLLF 294


>gi|257899649|ref|ZP_05679302.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com15]
 gi|257837561|gb|EEV62635.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com15]
          Length = 575

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +  +++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQIIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|74310937|ref|YP_309356.1| taurine transporter subunit [Shigella sonnei Ss046]
 gi|73854414|gb|AAZ87121.1| taurine transport system permease protein [Shigella sonnei Ss046]
 gi|323164155|gb|EFZ49962.1| taurine transport system permease protein tauC [Shigella sonnei
           53G]
          Length = 275

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  +V+AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSVLAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|116249179|ref|YP_765020.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253829|emb|CAK12224.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 295

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    V+S+        L A+S RL  ++ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTVLSIAIGIPMGILMARSDRLQRIINPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV G     I+AI       M       +  + +D+ E + +F  S  QK + + +P
Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLP 213

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  L
Sbjct: 214 LALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266

Query: 247 TMLGVIFLYDQL 258
            ++G+  ++D++
Sbjct: 267 AIVGIAIIFDRV 278


>gi|218437070|ref|YP_002375399.1| binding-protein-dependent transporters inner membrane component
           [Cyanothece sp. PCC 7424]
 gi|218169798|gb|ACK68531.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7424]
          Length = 275

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++FRV+    + +I+ IP+GI +G    I +  +P   ++   PA  F PL+   + Y 
Sbjct: 84  ISVFRVLSGFFLGAILSIPLGISMGAFASIRALFEPIIGVIRYMPAPAFTPLL---LIYL 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    ++L+ + GT ++    ++      P +  EV+ +     W+  R +I P I P
Sbjct: 141 GIDEPSKIALIFL-GTVFFNTLMIMDSVKFIPKELIEVSYTLGGNRWQVLRQVISPFIVP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +         AWN  +V+E+ +        TGLG  I
Sbjct: 200 KIIDTFRINMAAAWNLVVVAELVA------AETGLGKRI 232



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +P   F    ++Y     P K        I  IF   V+  T  +  S+  I
Sbjct: 119 PIIGVIRYMPAPAFTPLLLIYLGIDEPSK--------IALIFLGTVFFNTLMIMDSVKFI 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L EVS +   + WQ    +  PF +P ++    ++M+  W  VV +E+ V  +T   
Sbjct: 171 PKELIEVSYTLGGNRWQVLRQVISPFIVPKIIDTFRINMAAAWNLVVVAEL-VAAET--- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G  I LA K      I +A L +LG+I     L FR
Sbjct: 227 --GLGKRILLAQKFLKTDEI-FACLIVLGMIGFAIDLSFR 263


>gi|221370082|ref|YP_002521178.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221163134|gb|ACM04105.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 276

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 11/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R++  + +A ++   +G+ IG      +  +P    +   P   + P+++     
Sbjct: 78  ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLV--- 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++    ++++ I    + I++NV+ G          VA+S   +  +  RY+I+PGI 
Sbjct: 135 FGIDNRTTITVVFI-AASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGIL 193

Query: 504 PYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           PY +TG     G AW A I +E +A+  H      GLG  I ++ E      +  G+L +
Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLAASSH------GLGFMIYDAQEYMDMKSIYGGILTI 247

Query: 563 CCFVLALNR 571
               L + R
Sbjct: 248 SVLGLLIER 256


>gi|254490864|ref|ZP_05104047.1| ABC transporter, permease protein [Methylophaga thiooxidans DMS010]
 gi|224464036|gb|EEF80302.1| ABC transporter, permease protein [Methylophaga thiooxydans DMS010]
          Length = 340

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449
           ++AS+I IP+GI  G    + S I P  Q+        + P+V   VS  +++ N     
Sbjct: 142 LLASVIAIPIGIVAGLSNTLYSAINPLIQIFKPVSPLAWLPIVTMVVSALYVSDNPLFAK 201

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +  ++ ++  + W  L N   G S+   D   VA    +        +++P   P   
Sbjct: 202 SFVTSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYKVVIPASIPMIF 261

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS
Sbjct: 262 TGLRISLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 299



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 16/125 (12%)

Query: 144 TSQVWNMTFSMYQSLCN-------IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           TS +  M  S++ +L N       I +DL  V+R  RL+     + + +P S+P +   +
Sbjct: 205 TSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYKVVIPASIPMIFTGL 264

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIF 253
            +S+  GW  ++A+EM+         PG+G ++    +    + L  I+ A+LT+  V F
Sbjct: 265 RISLGIGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSESLSRIMVAVLTIGIVGF 318

Query: 254 LYDQL 258
           + D++
Sbjct: 319 ILDRI 323


>gi|126641490|ref|YP_001084474.1| ABC taurine transporter permease subunit [Acinetobacter baumannii
           ATCC 17978]
          Length = 204

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 12  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 71

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 72  TTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + SE+ +         G+G  +  + +      V+LG++++   
Sbjct: 128 IITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 181

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 182 AVSFELFL 189



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 43  VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSTHGV 94

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VASE++
Sbjct: 95  LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVASELV 149


>gi|28869973|ref|NP_792592.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853218|gb|AAO56287.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 282

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 174 VEVGQMYGFSRYRLTQRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  + I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|330961000|gb|EGH61260.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 282

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVMIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
           G  ++   +      +L A++ +  +  L D LL    +  + W + F  +   G
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFNGQSREG 282



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       ++  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKIVMIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|184158076|ref|YP_001846415.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874536|ref|ZP_08442439.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209670|gb|ACC57068.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|332737380|gb|EGJ68304.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 284

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F +        +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S       + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           MI          GIG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|56807484|ref|ZP_00365427.1| COG2113: ABC-type proline/glycine betaine transport systems,
           periplasmic components [Streptococcus pyogenes M49 591]
          Length = 452

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V
Sbjct: 22  VLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 78

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 79  PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 132

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 133 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 173


>gi|195977325|ref|YP_002122569.1| glycine betaine transport system permease protein OpuAB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974030|gb|ACG61556.1| glycine betaine transport system permease protein OpuAB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 576

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AKS+ +  V+ P+LD+MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISVLLGIPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +  QK   + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRHIPTELVEASDAFGSTPKQKLLKVELPLAKH 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|218529302|ref|YP_002420118.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218521605|gb|ACK82190.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
          Length = 279

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A ++ IPVG  IG  P +S  + P+ Q+L       + PL +  +    
Sbjct: 91  SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L+     ++ +IF  + W +L N + G +    ++  VA +  ++  R    +ILP   P
Sbjct: 151 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G +        S   V+  +L++  
Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFAWNEWNNLSITNVITSILVIGL 259

Query: 565 FVLALNRFL 573
             + L++ L
Sbjct: 260 VGMVLDQLL 268



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + +P + P ++
Sbjct: 149 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG +         +  ++ ++L +  V  
Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFAWNEWNNLSITNVITSILVIGLVGM 262

Query: 254 LYDQLLFR 261
           + DQLL R
Sbjct: 263 VLDQLLAR 270


>gi|226309964|ref|YP_002769858.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
 gi|226092912|dbj|BAH41354.1| probable glycine betaine ABC transporter permease protein
           [Brevibacillus brevis NBRC 100599]
          Length = 279

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 96/191 (50%), Gaps = 23/191 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+A +IS+        L A+      ++ PILD+MQ++P   +L    ++F  L  G+V
Sbjct: 97  VLTATMISIAIGIPVGILCARHDTFRNLVTPILDLMQTMPAFVYL-IPAIFFFGL--GEV 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
            G   + IFA+    +  +T      +  +P ++EE + +F  +GWQK   + +P++   
Sbjct: 154 PGVIASVIFAL--PPIVRLT---NLGIRQVPAEMEEAADAFGATGWQKLVKVQLPYAKST 208

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            + G+   +M+++S          M+V+   +I   G+G+ +  A+ + D+     A L+
Sbjct: 209 ILAGVNQCIMLALS----------MVVIA-AMIGAKGLGADVYRAVSQVDIGRGFEAGLS 257

Query: 248 MLGVIFLYDQL 258
           ++ +  + D+L
Sbjct: 258 IVIIAIVLDRL 268


>gi|121604319|ref|YP_981648.1| nitrate ABC transporter inner membrane subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120593288|gb|ABM36727.1| nitrate ABC transporter, inner membrane subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 311

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+I+ IPVG  IG    +S+   P   L+       + P  +  + +  
Sbjct: 120 SLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPVSPLAWLP--IGLLVFKG 177

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 178 ADPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 235

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 236 MLTGVRLAVGTAWLVIVAAEMLTGG 260



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +M+ +  L +L   ++ F         GA+ AAI+ IF   +W M  +    +  +
Sbjct: 154 PLISLMRPVSPLAWLPIGLLVFK--------GADPAAIWTIFICSIWPMIINTAVGVQRV 205

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 206 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 260


>gi|150390569|ref|YP_001320618.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
 gi|149950431|gb|ABR48959.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
          Length = 287

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 19/155 (12%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +TL M L++ VIS++       L AK++ +  +++PI+D+MQ++P   +L   V +F   
Sbjct: 100 STLSMVLTSTVISIMLGIPIGILIAKNQIMNRIIMPIMDLMQTMPAFVYLIPAVSFF--- 156

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     IF+I    ++ N+       +  +P +L E + +F  +G QK   +  
Sbjct: 157 RMGKVPGIFATVIFSIAPCIRLTNL------GIRQVPEELIEAADAFGSTGAQKLMKVQF 210

Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P +    M G+   +M+S+S     VV S MI  G
Sbjct: 211 PLALSTIMAGVNQTIMLSLS----MVVISAMIGAG 241


>gi|15674389|ref|NP_268563.1| putative glycine-betaine binding permease [Streptococcus pyogenes
           M1 GAS]
 gi|13621479|gb|AAK33284.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes M1 GAS]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|325000348|ref|ZP_08121460.1| binding-protein-dependent transport systems inner membrane
           component [Pseudonocardia sp. P1]
          Length = 281

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 100/205 (48%), Gaps = 21/205 (10%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+++ + I ++   V ATL+   RR   V+   + +++++P++G +   +++F      K
Sbjct: 90  RVVAGIAIGVVTAVVLATLSGLFRRGEDVIDAPVQMLRTVPVIGLIPLLIIWFGIGEEPK 149

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   LA  F ++         +++  + N+   L E +R+  L  + +  ++ +P +MP
Sbjct: 150 IVLIGLAVTFPLY--------MNLFGGIRNVDATLVEAARTLGLGWFGQVRHVILPSAMP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLA---ILYAM 245
             +  +  S+   W        +V G+T+    GIG  +  A +  E D++    +LYA+
Sbjct: 202 QFLVGLRYSLGTAWL------ALVFGETINATSGIGYEMNRAREFFETDVIVVCLVLYAL 255

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
           L ++G   +  +LL R ++ W   F
Sbjct: 256 LGLVGDGIV--RLLERGLLSWRPAF 278


>gi|300871643|ref|YP_003786516.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000]
 gi|300689344|gb|ADK32015.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000]
          Length = 249

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ +T Q++L       IT+ RV    +IA II +P+G+ +G+   I   + P    +  
Sbjct: 44  IDSYTVQNLL-------ITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQ 96

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL +         P ++   L+     + ++ N I G      ++   A S  
Sbjct: 97  VPIMAWIPLAIVWFGLGD-GPTIF---LITMSAIFPLIINTIDGVRGIDPNYINAARSMG 152

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    IILPG  P ++TG   A G  W + I +E  +       + G G  + E+ 
Sbjct: 153 AKNIDIMLDIILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQ 206

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++   P++   +++      +++R L
Sbjct: 207 QRLETPKLYALMIVSALIGFSMDRIL 232


>gi|302557820|ref|ZP_07310162.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
 gi|302475438|gb|EFL38531.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
          Length = 296

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 11/202 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R ++  + A  I  P+G+ +   P + + + P    L + P+  + P   + + ++ 
Sbjct: 100 SLERGLLGFLAALAIGTPLGLVVARVPVVRATLSPVLSGLQSLPSVAWVP---AAIIWFG 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  +  +  +++ G    I   +++G    P  +     +   TG R  RYI+LP   P 
Sbjct: 157 LT-DTAMYTVILLGAVPSIAVGLVSGIDQVPPLYLRAGRTIGATGLRGARYIVLPAALPG 215

Query: 506 YVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  G       +W + + +E +AS   + +   GLG Y+A S E    P V  G+L++  
Sbjct: 216 YTAGLKQGWAFSWRSLMATELIASSPDLGV---GLGRYLANSREAIDLPGVFFGILLILA 272

Query: 565 FVLALNRFLWHPLYLYGTRCLR 586
             + ++  ++ PL     R LR
Sbjct: 273 VGVLIDLLVFSPLE---RRVLR 291



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 19/182 (10%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQS 157
            L P+L  +QS+P + ++   +++F         G    A++  I    V ++   +   
Sbjct: 131 TLSPVLSGLQSLPSVAWVPAAIIWF---------GLTDTAMYTVILLGAVPSIAVGLVSG 181

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG- 216
           +  +P       R+   +G +   Y+ +P ++PG    +    +  W  ++A+E+I    
Sbjct: 182 IDQVPPLYLRAGRTIGATGLRGARYIVLPAALPGYTAGLKQGWAFSWRSLMATELIASSP 241

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           D  +   G+G Y+A + +  DL  + + +L +L V  L D L+F P+     + R+ R+ 
Sbjct: 242 DLGV---GLGRYLANSREAIDLPGVFFGILLILAVGVLIDLLVFSPL-----ERRVLRSR 293

Query: 277 GI 278
           G+
Sbjct: 294 GL 295


>gi|255016499|ref|ZP_05288625.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_7]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+         A+S R   ++ P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P D+ E +RSF  +  Q  + + +P
Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSTQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +M+S+S     VV + MI  G
Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           N  V   +D F        ++ ++ G+A+ +AW   G  V  FT   +L +  +G     
Sbjct: 27  NDGVGGFIDTFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  V+   IIA +I +P+GIW          I P   L+   PA V+    +  V +
Sbjct: 86  MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L P       +IF     +    + G    P D  E   SF  T  +    + LP   
Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSTQLLYKVQLPLAL 201

Query: 504 PYYVTG 509
           P  +TG
Sbjct: 202 PTIMTG 207


>gi|157369979|ref|YP_001477968.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157321743|gb|ABV40840.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 264

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 23/181 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI R
Sbjct: 101 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+Q F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVRFALGFMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++    +LYA+L  L  +    QLL R  + W   ++L++   
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADV--SAQLLERVWLRWHPAYQLKQGEA 263

Query: 278 I 278
           +
Sbjct: 264 L 264


>gi|91786202|ref|YP_547154.1| nitrate transport permease [Polaromonas sp. JS666]
 gi|91695427|gb|ABE42256.1| nitrate transport permease [Polaromonas sp. JS666]
          Length = 287

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 13/203 (6%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ +   +      D   +I LG  ++ RV +  ++A  + +P+G  IG  P +     P
Sbjct: 75  WKQVSNPLYDNGPNDKGILIQLGH-SLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDP 133

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDF 479
           F Q+L       + PL +  +    ++      + +IF  + W +L N   G SA   ++
Sbjct: 134 FIQVLKPISPLAWMPLALYTIKDSSIS-----GIFVIFICSVWPMLINTAFGVSAVKREW 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VAS+  ++  R    +ILP   P   TG   + G AW   + +E+   G      TG+
Sbjct: 189 LNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGG------TGI 242

Query: 540 GAYIAESTEKGSFPEVVLGVLIM 562
           G ++       S   V+  +L++
Sbjct: 243 GYFVWNEWNNLSLTNVIFAILVI 265



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++ IF IF   VW M  +    +  + R+   V+ +  +S  +K + + +P + P + 
Sbjct: 157 SSISGIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIF 216

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG ++        L  +++A+L +  V  
Sbjct: 217 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFAILVIGIVGM 270

Query: 254 LYD 256
           L D
Sbjct: 271 LLD 273


>gi|327393356|dbj|BAK10778.1| ABC-type sulfonate transport system, permease component SsuC
           [Pantoea ananatis AJ13355]
          Length = 279

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 93  SRRLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + RLG  L+   L +++++P L  +   +++F      K+    L  +F I+        
Sbjct: 105 TSRLGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY-------- 156

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + Y  + N+ R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W       
Sbjct: 157 LNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWL------ 210

Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIV 265
            ++V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +     LL R  + 
Sbjct: 211 TLIVAETISANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSAL--LLERVWLR 267

Query: 266 WSNKFRLERTTG 277
           W   ++ +  T 
Sbjct: 268 WHPAYQRQEKTA 279



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 21/166 (12%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+L   P     PLV+    ++ ++ +  +  L+  GT + I  N   G         E+
Sbjct: 118 QMLRNVPHLALIPLVIL---WFGIDESAKI-FLVALGTLFPIYLNTYHGIRNVDRGLVEM 173

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GW  +  +ILPG  P  + G   A G  W   IV+E  S         G+G Y
Sbjct: 174 ARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANAGIG-Y 226

Query: 543 IAESTEKGSFPEVVLGVLIMCCFV--------LALNR--FLWHPLY 578
           +A +  +    +VV+  +I+   +        L L R    WHP Y
Sbjct: 227 LAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAY 272


>gi|306846035|ref|ZP_07478601.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306273524|gb|EFM55375.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 295

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 17/197 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q A RT   +    V+S++       L A+S RL  ++ PILD+MQ++P   +L   V  
Sbjct: 98  QDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV-- 155

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  G+V G     I+AI    ++ N+   +      + +D+ E + +F  S  QK +
Sbjct: 156 -MLLGIGRVPGLIAVVIYAIPPIIRLTNLGIRL------VDKDVLEAADAFGSSNIQKLF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     
Sbjct: 209 KVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLG 261

Query: 242 LYAMLTMLGVIFLYDQL 258
           ++  L ++G+  ++D++
Sbjct: 262 IFNGLAIVGIAIIFDRV 278


>gi|291299833|ref|YP_003511111.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290569053|gb|ADD42018.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 261

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 22/181 (12%)

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKV----------IGAELAAIFAIFTSQVWNMTFSMYQ 156
           + S+P L   T + + F+   P              G E   +  ++ S  W +   +  
Sbjct: 86  IASVPGLRAATASTIEFLRPIPSVALIPLAILLLGTGIESTLLLVVYAS-FWQVLIQVIA 144

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +I     + +RSFRLS  ++ W+L +P ++P ++  + ++ S      V +E+    
Sbjct: 145 GINDIDSVAADTARSFRLSAARRVWHLALPSALPYILTGVRLAASVALVLAVTAEL---- 200

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV----IFLYDQLLFRPMIVWSNKFRL 272
             VI  PG+G  I++A K    +  +YA++ + G+    + L  +   R ++ W    R 
Sbjct: 201 --VIGAPGLGHEISVA-KTSAAVPRMYALIAVTGILGVAVNLAARGAERRLLRWHPSIRQ 257

Query: 273 E 273
           E
Sbjct: 258 E 258



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LL+++ + W +L  VIAG +   +   + A SF ++  R   ++ LP   PY +TG   A
Sbjct: 128 LLVVYASFWQVLIQVIAGINDIDSVAADTARSFRLSAARRVWHLALPSALPYILTGVRLA 187

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCF 565
              A   ++ +E+       +   GLG  I+ +    + P +        +LGV +    
Sbjct: 188 ASVALVLAVTAELV------IGAPGLGHEISVAKTSAAVPRMYALIAVTGILGVAVNLAA 241

Query: 566 VLALNRFL-WHP 576
             A  R L WHP
Sbjct: 242 RGAERRLLRWHP 253


>gi|311693904|gb|ADP96777.1| nitrate transport system permease protein [marine bacterium HP15]
          Length = 275

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ +AIF IF   +W M  +    + N+ +D   V+R+  L   +    + +P + P ++
Sbjct: 145 SDASAIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVILPAAAPTIL 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++L M+GV+
Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLASVIFSIL-MIGVV 256



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   + A  I +PVG  IG  P +   + P+ Q+L       + PL +  +    
Sbjct: 87  SVYRVLTGYLAAMAIALPVGFLIGMSPLMYKALNPYIQVLRPISPLAWMPLALFIIQDSD 146

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G +    D+  VA +  +   R    +ILP   P
Sbjct: 147 AS-----AIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVILPAAAP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +TG   + G AW   + +E+   G      TG+G Y+
Sbjct: 202 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234


>gi|209558734|ref|YP_002285206.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Streptococcus pyogenes NZ131]
 gi|209539935|gb|ACI60511.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Streptococcus pyogenes NZ131]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|206577481|ref|YP_002239418.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|288936268|ref|YP_003440327.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510676|ref|ZP_06550046.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp.
           1_1_55]
 gi|206566539|gb|ACI08315.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|288890977|gb|ADC59295.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289777392|gb|EFD85390.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp.
           1_1_55]
          Length = 263

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      V   ++  SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISSWRALVGFAIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + +  + NI R L E++RS+ LSG+  F +
Sbjct: 120 FGIDETAKIFLVSLGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFALFRH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
               ILYA+L  L  +    QLL R  + W+  + L+   
Sbjct: 225 VVAIILYAILGKLADV--CAQLLERLWLRWNPAYHLQEAN 262



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +V   I   I + +G+  G        +    Q+L   P     PLV+    +
Sbjct: 63  AISSWRALVGFAIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++    +  L+  GT + I  N   G         E+A S+ ++G+  +R++ILPG  
Sbjct: 120 FGIDETAKI-FLVSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV------- 556
           P  + G   A G  W   IV+E  S         G+G Y+A +  +    +VV       
Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 557 --LGVLIMCCFVLALNRFL-WHPLY 578
             LG L   C  L    +L W+P Y
Sbjct: 232 AILGKLADVCAQLLERLWLRWNPAY 256


>gi|28211936|ref|NP_782880.1| putative glycine-betaine binding permease protein [Clostridium
           tetani E88]
 gi|28204379|gb|AAO36817.1| putative glycine-betaine binding permease protein [Clostridium
           tetani E88]
          Length = 275

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 10/151 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L + +I+LL    +  ++A++ +   +L PILD MQ++P   +L   V++F   
Sbjct: 90  QTLALVLVSALIALLIGVPFGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGM- 148

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV GA    IF++  + ++ N+       +  +P ++ E ++SF  +  Q  + + +
Sbjct: 149 --GKVPGAIATVIFSMPPAVRLTNL------GIRQVPDEVVEAAKSFGSTPKQMLYKVQL 200

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P ++P ++  +  ++      VV S MI  G
Sbjct: 201 PIALPTILAGVNQTIMLALSMVVVSAMIGAG 231


>gi|119383697|ref|YP_914753.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119383939|ref|YP_914995.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119373464|gb|ABL69057.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119373706|gb|ABL69299.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 296

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L+A ++S+        L A+S R+  V+ PILDIMQ++P   +L   V   M L
Sbjct: 103 KTISMVLAATLLSIAIGLPLGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVV---MLL 159

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G+V G     I+A+       M       +  +  ++ E + +F  S WQK     +P
Sbjct: 160 GIGRVPGLIAVVIYALPP-----MIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLP 214

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            ++P    G+   +MM+++          M+V+  ++I + G+G  +  AI  Q     L
Sbjct: 215 LALPTIMAGINQTIMMALA----------MVVIA-SMIGVQGLGQPVLRAISNQYFTLGL 263

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           +    ++G+  L+D    R    W  + +  R
Sbjct: 264 FNGFAIVGIAILFD----RISQAWGKRLQKHR 291


>gi|322805685|emb|CBZ03250.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Clostridium botulinum H04402 065]
          Length = 253

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P  V   ++++ V    
Sbjct: 68  SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   PY
Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++G +   G  W  S+ SEV S     +    L A    +TE+
Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATEE 226


>gi|256842287|ref|ZP_05547791.1| choline ABC transporter, permease [Parabacteroides sp. D13]
 gi|262384806|ref|ZP_06077938.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_33B]
 gi|256736171|gb|EEU49501.1| choline ABC transporter, permease [Parabacteroides sp. D13]
 gi|262293522|gb|EEY81458.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_33B]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+         A+S R   ++ P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P D+ E +RSF  +  Q  + + +P
Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSSQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +M+S+S     VV + MI  G
Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           N  V   +D F        ++ ++ G+A+ +AW   G  V  FT   +L +  +G     
Sbjct: 27  NDGVGGFIDTFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  V+   IIA +I +P+GIW          I P   L+   PA V+    +  V +
Sbjct: 86  MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L P       +IF     +    + G    P D  E   SF  T  +    + LP   
Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSSQLLYKVQLPLAL 201

Query: 504 PYYVTG 509
           P  +TG
Sbjct: 202 PTIMTG 207


>gi|213966988|ref|ZP_03395138.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301385173|ref|ZP_07233591.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302134136|ref|ZP_07260126.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928310|gb|EEB61855.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 282

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|220924993|ref|YP_002500295.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949600|gb|ACL59992.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I   + +PVG+ +G    +   + P  Q+L   P   + PL    + ++ 
Sbjct: 84  SLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPL---AIVWFG 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  GT + +L N +AG     + +   A +     W  +R +ILP   P+
Sbjct: 141 LG-NPPALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPF 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            + G     G A+   IV+E+ +       + GLG  I E+ E
Sbjct: 200 VLAGMRIGIGTAFIVVIVAEMIAV------SDGLGYRILEARE 236



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 8/158 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LP  A  +  R+++   I +        L   S RL  ++ P+L I++ IP + ++   
Sbjct: 76  ELPHDAVASLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLA 135

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V+F    P         A+F I     + +  +    +  +       +R+     W  
Sbjct: 136 IVWFGLGNP--------PALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTL 187

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           F  + +P + P ++  M + +   +  V+ +EMI V D
Sbjct: 188 FRRVILPAASPFVLAGMRIGIGTAFIVVIVAEMIAVSD 225


>gi|148379346|ref|YP_001253887.1| ABC transporter permease [Clostridium botulinum A str. ATCC 3502]
 gi|153932069|ref|YP_001383721.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|153935138|ref|YP_001387270.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. Hall]
 gi|148288830|emb|CAL82914.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|152928113|gb|ABS33613.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|152931052|gb|ABS36551.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. Hall]
          Length = 253

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P  V   ++++ V    
Sbjct: 68  SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   PY
Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++G +   G  W  S+ SEV S     +    L A    +TE+
Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATEE 226


>gi|227523463|ref|ZP_03953512.1| binding-protein-dependent transport system inner membrane component
           [Lactobacillus hilgardii ATCC 8290]
 gi|227089390|gb|EEI24702.1| binding-protein-dependent transport system inner membrane component
           [Lactobacillus hilgardii ATCC 8290]
          Length = 251

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II ++I + +G+++G     +    PF +++   PA  + PL +      ++        
Sbjct: 68  IIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSYMAE----IF 123

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   + + F  I G  +   D+ E A +   + ++  R +++PG  P    G  TA 
Sbjct: 124 LIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPNIFIGIFTAM 183

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           G ++   ++SE+           GLG YI  +   G++ +V   ++IM      +  FL 
Sbjct: 184 GLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVLFSVIFSFL- 236

Query: 575 HPLYLYGTR 583
           + L  Y  R
Sbjct: 237 NKLQEYALR 245


>gi|224825054|ref|ZP_03698160.1| nitrate ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602725|gb|EEG08902.1| nitrate ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 304

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F    P        A+I+ IF S VW M  +    +  +
Sbjct: 148 PVISLLRPVSPLAWLPIGLLVFKAASP--------ASIWVIFISSVWPMILNTAAGVRAV 199

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  RLS ++ F  +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 200 PQDYLNVARVLRLSEFKVFTTILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGG 254



 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    +S+   P   LL       + P  +  + +  
Sbjct: 114 SLGRVGIGFGLAALVGIPAGFILGRFAFVSAMFAPVISLLRPVSPLAWLP--IGLLVFKA 171

Query: 446 LNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +P ++W+   +   + W ++ N  AG  A P D+  VA    ++ ++ +  I+ P + P
Sbjct: 172 ASPASIWV---IFISSVWPMILNTAAGVRAVPQDYLNVARVLRLSEFKVFTTILFPSVLP 228

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           + +TG   + G AW   + +E+ + G
Sbjct: 229 HVLTGVRLSIGVAWLVIVAAEMLTGG 254


>gi|153006707|ref|YP_001381032.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
 gi|152030280|gb|ABS28048.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
          Length = 274

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     + +++ +P+G+ +G +P +   + P  Q+L   P   + PL    + ++ 
Sbjct: 81  SLIRVAGGFALGAVLALPLGLLMGAKPMVYELMNPLVQILRPIPPIAYIPL---AILWFG 137

Query: 446 L-NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L NP  +   L+  G  + IL N IAG       +   A +   + W  +  I++P   P
Sbjct: 138 LGNPPAFF--LISLGAFFPILMNTIAGVRNVDAIYLRAAKNLGASEWTLFWRIMIPAAMP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y + G     G A+   IV+E+ +        +GLG  I E+ E     +V+ G++ +  
Sbjct: 196 YILAGVRIGIGVAFIVVIVAEMIA------VNSGLGYRILEAREYFWSDKVIAGMISIGL 249

Query: 565 FVLALNRFL 573
             L ++ F+
Sbjct: 250 AGLGIDFFM 258


>gi|94991665|ref|YP_599764.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS2096]
 gi|94545173|gb|ABF35220.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS2096]
          Length = 339

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|21909680|ref|NP_663948.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS315]
 gi|21903863|gb|AAM78751.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS315]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 88  LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 144

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 145 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 198

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 199 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 238


>gi|254409551|ref|ZP_05023332.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196183548|gb|EDX78531.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 282

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ+I   V+ +T  D+   I     ++FRV+   ++A++I IP+G ++G    I + ++P
Sbjct: 73  WQAI---VSLWTSGDLPQDI---VASVFRVLCGFLLAALISIPLGTFMGTFASIRALMEP 126

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              ++   PA  F PL+   + Y+ +     + LL+  GT ++    ++      P +  
Sbjct: 127 IIGIVRYMPAPAFIPLL---ILYFGVGETPKI-LLIFIGTLFFNTLMIMDSVKFVPKELI 182

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITAC----GGAWNASIVSEVASWGHIHLRT 536
           E  +S+ + G R    ++L  IFP+ +   I AC      +WN  IV+E+ +       T
Sbjct: 183 E--TSYTLGGKR--HQVLLNVIFPFILPSIIDACRVNIAASWNLVIVAELVA------AT 232

Query: 537 TGLGAYIA 544
            GLG  I+
Sbjct: 233 EGLGRRIS 240



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 14/175 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LPQ    +  R+L   +++ L +    T       +  ++ PI+ I++ +P   F+   
Sbjct: 84  DLPQDIVASVFRVLCGFLLAALISIPLGTFMGTFASIRALMEPIIGIVRYMPAPAFIPLL 143

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++YF           E   I  IF   ++  T  +  S+  +P++L E S +      Q 
Sbjct: 144 ILYFGV--------GETPKILLIFIGTLFFNTLMIMDSVKFVPKELIETSYTLGGKRHQV 195

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
              +  PF +P ++    ++++  W  V+ +E++   +      G+G  I++A +
Sbjct: 196 LLNVIFPFILPSIIDACRVNIAASWNLVIVAELVAATE------GLGRRISVAQR 244


>gi|94989669|ref|YP_597769.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10270]
 gi|94543177|gb|ABF33225.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10270]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|150006771|ref|YP_001301514.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|298377733|ref|ZP_06987684.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|301309036|ref|ZP_07214981.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 20_3]
 gi|149935195|gb|ABR41892.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|298265436|gb|EFI07098.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|300833062|gb|EFK63687.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 20_3]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+L+         A+S R   ++ P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P D+ E +RSF  +  Q  + + +P
Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSSQLLYKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +M+S+S     VV + MI  G
Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           N  V   +D F        ++ ++ G+A+ +AW   G  V  FT   +L +  +G     
Sbjct: 27  NDGVGGFIDAFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  V+   IIA +I +P+GIW          I P   L+   PA V+    +  V +
Sbjct: 86  MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L P       +IF     +    + G    P D  E   SF  T  +    + LP   
Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSSQLLYKVQLPLAL 201

Query: 504 PYYVTG 509
           P  +TG
Sbjct: 202 PTIMTG 207


>gi|124268670|ref|YP_001022674.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124261445|gb|ABM96439.1| nitrate ABC transporter permease protein [Methylibium
           petroleiphilum PM1]
          Length = 295

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++ IF IF   VW M  +    +  + R+   V+R+  +S  +K + + +P + P ++
Sbjct: 165 SSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVILPAAAPTIL 224

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG ++        L  +++A+L ++GV+ 
Sbjct: 225 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFAIL-VIGVVG 277

Query: 254 LYDQLLF 260
           +   LLF
Sbjct: 278 MLLDLLF 284



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG  P +   + PF Q+L       + PL +  +    
Sbjct: 107 SLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLALYTIKDSS 166

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           ++      + +IF  + W +L N   G +    ++  VA +  ++  R    +ILP   P
Sbjct: 167 IS-----GIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVILPAAAP 221

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 222 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLTNVIFAILVIGV 275

Query: 565 FVLALN 570
             + L+
Sbjct: 276 VGMLLD 281


>gi|187923484|ref|YP_001895126.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714678|gb|ACD15902.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 247

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 26/188 (13%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L ++  + I LL     A++++ +RR    L P++  +QS+P +      +V+F   + 
Sbjct: 65  ALALVGGLAIGLL-----ASMSSIARR---TLFPLVTALQSMPKIALAPLLIVWFGYGFA 116

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K+  A L A F I  + +          L  +PR+L+E  R+   S  + FW+L +P +
Sbjct: 117 SKLAAAVLFAFFPIVIATM--------GGLAGVPRNLDEHFRALGASPARTFWHLRLPAA 168

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA---M 245
           +P L+  + ++M       +A    +VG+ +    G+G  I  A       A+ +A   M
Sbjct: 169 LPALIDGLKIAMP------LAVIGAIVGEFIGSESGLGHLIVFATSNAQ-TALSFAAILM 221

Query: 246 LTMLGVIF 253
           +T L ++F
Sbjct: 222 VTALAMLF 229


>gi|28895060|ref|NP_801410.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           SSI-1]
 gi|28810305|dbj|BAC63243.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes SSI-1]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|254360698|ref|ZP_04976847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261491837|ref|ZP_05988416.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494692|ref|ZP_05991172.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153091238|gb|EDN73243.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261309657|gb|EEY10880.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312492|gb|EEY13616.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 247

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V ++ A +I +P+G+ +GF  H+     P  QLL       + P++V  +    
Sbjct: 61  SLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRMISPLSWMPIIVMLLGVGD 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     +  L+ F T W ++ +  +G  +    + ++      T       I++P I  +
Sbjct: 121 LP----IYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSATRKELLCKIVVPAITGH 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G AW   +  E+           GLG +I ++ ++ ++ E++  ++I+   
Sbjct: 177 VLTGLRVAVGIAWVVLVPCEMLGVNQ------GLGYFILDTRDRLAYSELMAVIIIIGLI 230

Query: 566 VLALNRFL 573
             AL+  +
Sbjct: 231 GWALDSLI 238


>gi|94993560|ref|YP_601658.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10750]
 gi|94547068|gb|ABF37114.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10750]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|71909972|ref|YP_281522.1| glycine betaine-binding protein/glycine betaine transporter
           permease [Streptococcus pyogenes MGAS5005]
 gi|71852754|gb|AAZ50777.1| glycine betaine-binding protein/glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS5005]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|332999415|gb|EGK19000.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri VA-6]
          Length = 354

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|323173039|gb|EFZ58670.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli LT-68]
          Length = 354

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|312961036|ref|ZP_07775541.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284694|gb|EFQ63270.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 321

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 41/219 (18%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A+S RL M L P+LD MQ++P   +L   V+ F     G V G  +  IF++    
Sbjct: 120 GVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLF---GIGNVPGVLVTIIFSV-APL 175

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           V      + Q    +P D  E +R+F  + +Q    + +P + P    GL   +M+S+S 
Sbjct: 176 VRLTNLGIRQ----VPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQALMLSLS- 230

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAMLTMLGVIFLYDQLLFR 261
               VV + MI VG       G+G  +   I   D+ LA +  +  +L  IFL D+L   
Sbjct: 231 ---MVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFL-DRL--- 276

Query: 262 PMIVWSNKFRLERTTGIYPADSW-------VLYLFRKTN 293
                  +   ER+      + W       V+Y  ++ N
Sbjct: 277 ------TQAMGERSNRATKGEHWYQTGPAGVVYRLKRKN 309


>gi|300986100|ref|ZP_07177716.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300407925|gb|EFJ91463.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
          Length = 324

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 141 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 195

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 196 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 248

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 249 VVIASMIAVG-------GLGQMVLRGIGRLDM 273


>gi|291518791|emb|CBK74012.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Butyrivibrio fibrisolvens 16/4]
          Length = 253

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV    IAS++ I +G   G  P I   I P A  +   P   + PL++       
Sbjct: 62  SLIRVVQGYAIASVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLIILWCGIGE 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      ++++    + I+ N ++G S+  +   EVAS + +  W  +  + LP   P 
Sbjct: 122 LSK----VVVIVIAATFPIMINTMSGVSSTSDLLLEVASLYKLGKWETFLKVYLPNALPS 177

Query: 506 YVTGAITACGGAWNASIVSEV 526
            + G     G +W A + +E+
Sbjct: 178 ILVGLKLGMGASWMAVVAAEM 198



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L Q    + +R++    I+ +       LA     +  +++P    ++ +PI+ ++   
Sbjct: 54  QLQQDIIASLIRVVQGYAIASVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLI 113

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++       KV+   +AA F I  +     T S   S  ++   L EV+  ++L  W+ 
Sbjct: 114 ILWCGIGELSKVVVIVIAATFPIMIN-----TMSGVSSTSDL---LLEVASLYKLGKWET 165

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F  + +P ++P ++  + + M   W  VVA+EM+
Sbjct: 166 FLKVYLPNALPSILVGLKLGMGASWMAVVAAEML 199


>gi|260598202|ref|YP_003210773.1| nitrate transport permease nrtB [Cronobacter turicensis z3032]
 gi|260217379|emb|CBA31423.1| Nitrate transport permease protein nrtB [Cronobacter turicensis
           z3032]
          Length = 293

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LG +  P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 132 LGRMFNPLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTA 183

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 184 EGVKRIPDDYLNVARVLQLSEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTG 243

Query: 216 G 216
           G
Sbjct: 244 G 244



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP+G  IG    +     P   LL       + P  +  + +  
Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLP--IGLLLFQK 161

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P+D+  VA    ++ W   R I+ P + P 
Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRILFPAVLPA 219

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG 244


>gi|193077101|gb|ABO11872.2| ABC taurine transporter permease subunit [Acinetobacter baumannii
           ATCC 17978]
          Length = 289

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + SE+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSTHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VASE++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVASELV 234


>gi|227871942|ref|ZP_03990333.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
 gi|227842203|gb|EEJ52442.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
          Length = 296

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           IIA+++ + +G+++G   H+S  + P  ++++  P  ++ P  V+ +  + +   +++  
Sbjct: 117 IIATVLGVSLGLFVGLSDHLSGIVLPIVRVISPIPPIIYSPYAVALLPTFRVA-AIFVVT 175

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L IF   W +  N++             A + +++ +     +I+  + PY + G I + 
Sbjct: 176 LTIF---WSLFMNMVLSVREIDPKIMNSAKTLNVSKFS----MIVDVLIPYSLPGLINSI 228

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
             + + S +  V +   +   T+GLG YI   ++  +F +VV G+ ++   V  LN    
Sbjct: 229 SVSISTSFL--VLTAAEMIGGTSGLGWYIKYHSDFANFDKVVFGIFMIGLVVTILN---- 282

Query: 575 HPLYLYGTRCLR 586
                +G + LR
Sbjct: 283 -----FGVKSLR 289



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  L  +++PI+ ++  IP + +  + V               +AAIF +  +  W++  
Sbjct: 133 SDHLSGIVLPIVRVISPIPPIIYSPYAVALLPTF--------RVAAIFVVTLTIFWSLFM 184

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +M  S+  I   +   +++  +S +     + +P+S+PGL+ ++ +S+S  +  + A+EM
Sbjct: 185 NMVLSVREIDPKIMNSAKTLNVSKFSMIVDVLIPYSLPGLINSISVSISTSFLVLTAAEM 244

Query: 213 IVVGDTVIPLPGIGSYI 229
           I  G T     G+G YI
Sbjct: 245 I--GGT----SGLGWYI 255


>gi|71902822|ref|YP_279625.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS6180]
 gi|71801917|gb|AAX71270.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS6180]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADV 252


>gi|313902347|ref|ZP_07835751.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313467395|gb|EFR62905.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 22/172 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R+  +++P+LD MQ++P   +L   ++ F  L P   +   LA +          +
Sbjct: 118 AESCRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP---VPGTLATVVYALPPVARLV 174

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              + Q    +P D++E +R+F  + WQ    + +P ++P    G+    MM+++     
Sbjct: 175 DLGIRQ----VPADVQEAARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALA----M 226

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+  G       G+G  +  AI+  D  A   +  T++ +  + D+L
Sbjct: 227 VVIASMVGAG-------GVGEAVMRAIQRVDPGAGFESGFTIVALAIVMDRL 271


>gi|121607614|ref|YP_995421.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552254|gb|ABM56403.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 254

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +TTL  L    ++++     A L A SR +   + P+L   QSIP +      VV+F   
Sbjct: 61  KTTLATLGGFGLTIVIGIPIAMLIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + P KVI A L   F +  S V  M F       ++  D+ +++RS   S  Q F+ + +
Sbjct: 121 ILP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +S++      +A    VVG+ V    GIG  + +A    DL  +  A+
Sbjct: 172 PQALPAIFSGLKVSVT------LAVVGAVVGEFVGANSGIGYVLQVANGNFDLPLMFAAL 225

Query: 246 --LTMLGVI-FLYDQLLFRPMIVWSNKFR 271
             L+ +GVI F+   L+ R MI W    R
Sbjct: 226 VVLSSIGVILFVAVDLIERSMIPWHASQR 254


>gi|94987791|ref|YP_595892.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS9429]
 gi|94541299|gb|ABF31348.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS9429]
          Length = 578

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|50913550|ref|YP_059522.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS10394]
 gi|139473033|ref|YP_001127748.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           str. Manfredo]
 gi|50902624|gb|AAT86339.1| Glycine betaine-binding protein [Streptococcus pyogenes MGAS10394]
 gi|134271279|emb|CAM29495.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|258614687|ref|ZP_05712457.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium DO]
          Length = 560

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|307152000|ref|YP_003887384.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982228|gb|ADN14109.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 273

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 10/159 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  RV +   + +I+ +P+GI +G    I + ++P   ++   PA  F PL+   + Y 
Sbjct: 82  ISFLRVSLGFFLGAIVAVPLGISMGAFASIRALVEPIMGVVRYMPAPAFIPLL---MIYL 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    ++L+ + GT ++    ++ G    P +  EVA +     ++  R +I+P + P
Sbjct: 139 GIDEPSKIALIFL-GTVFFNTLMIMDGVKFIPKELIEVAYTLGGNRFQVVRQVIIPYVIP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             +         AWN  +V+E+ +        TGLG  I
Sbjct: 198 NIIDTFRINMAAAWNLVVVAELVA------AQTGLGKRI 230



 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +P   F+   ++Y     P K        I  IF   V+  T  +   +  I
Sbjct: 117 PIMGVVRYMPAPAFIPLLMIYLGIDEPSK--------IALIFLGTVFFNTLMIMDGVKFI 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L EV+ +   + +Q    + +P+ +P ++    ++M+  W  VV +E++        
Sbjct: 169 PKELIEVAYTLGGNRFQVVRQVIIPYVIPNIIDTFRINMAAAWNLVVVAELVAAQT---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G  I LA K      I +A L +LGVI     L FR
Sbjct: 225 --GLGKRILLAQKFLKTDEI-FACLIVLGVIGFAIDLSFR 261


>gi|108802309|ref|YP_642506.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871462|ref|YP_941414.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126438291|ref|YP_001073982.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772728|gb|ABG11450.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697551|gb|ABL94624.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126238091|gb|ABO01492.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 271

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA ++    GI +G    + + ++P  + L   P+    PLVV  +     +  L+L+  
Sbjct: 87  IAVVLGTVAGIGLGLLVPLEALLRPVIEFLRPVPSVALIPLVVLTIGTGSQS-ALFLA-- 143

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            +F   W +L   IAG  A      E A S+H+T W+  R+I LP + PY  T 
Sbjct: 144 -VFAAFWQVLVPAIAGVRAAHPVALETARSYHLTVWQRIRWIQLPSMLPYLATA 196



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L P+++ ++ +P +  +   V+           G++ A   A+F +  W +     
Sbjct: 105 LEALLRPVIEFLRPVPSVALIPLVVLTIGT-------GSQSALFLAVFAA-FWQVLVPAI 156

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +        E +RS+ L+ WQ+  ++ +P  +P L   + ++ S     VV +E+I  
Sbjct: 157 AGVRAAHPVALETARSYHLTVWQRIRWIQLPSMLPYLATAIRLATSTTLILVVTAEII-- 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               I +PGIG  I ++    D  A +YA + + G+  +    L R
Sbjct: 215 ----IQMPGIGYEITMSRSAGD-PARMYAYIAVSGLAGIVLNALMR 255


>gi|315291003|gb|EFU50368.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 327

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 144 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 198

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 199 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 251

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 252 VVIASMIAVG-------GLGQMVLRGIGRLDM 276


>gi|306842376|ref|ZP_07475033.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306287515|gb|EFM58980.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 281

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 17/197 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q A RT   +    V+S++       L A+S RL  ++ PILD+MQ++P   +L   V  
Sbjct: 84  QDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV-- 141

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  G+V G     I+AI    ++ N+   +      + +D+ E + +F  S  QK +
Sbjct: 142 -MLLGIGRVPGLIAVVIYAIPPIIRLTNLGIRL------VDKDVLEAADAFGSSNIQKLF 194

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     
Sbjct: 195 KVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLG 247

Query: 242 LYAMLTMLGVIFLYDQL 258
           ++  L ++G+  ++D++
Sbjct: 248 IFNGLAIVGIAIIFDRV 264


>gi|306828147|ref|ZP_07461410.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus pyogenes ATCC 10782]
 gi|304429684|gb|EFM32730.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus pyogenes ATCC 10782]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK+  +  ++ PILD MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      ++ +IP +L E S +F  +G QK + + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|260555329|ref|ZP_05827550.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260411871|gb|EEX05168.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 289

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + Y+ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWYVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FWY+ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWYVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|238796281|ref|ZP_04639791.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
 gi|238719974|gb|EEQ11780.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++V +  A  I IPVGI +G    + + + P  ++    P   + PL+V       
Sbjct: 59  SLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIGE 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +    + G  +        A +   T W+  R+++LP   P 
Sbjct: 119 TS-KILLIYLAIFAP---VTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALPA 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  +  ++E  +   V+ G++++   
Sbjct: 175 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIALV 228

Query: 566 VLALN 570
              L 
Sbjct: 229 AAGLE 233



 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ S +  R+L A+  ++            + RL  VL P+++I + IP L +L   V++
Sbjct: 54  QHLSASLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIW 113

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +T +    + +I +     +++   + WQ   +
Sbjct: 114 FG-------IG-ETSKILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRF 165

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 166 VVLPNALPAILTGIRIGLGVGWSTLVAAELI 196


>gi|241766705|ref|ZP_04764544.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           delafieldii 2AN]
 gi|241362958|gb|EER58652.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           delafieldii 2AN]
          Length = 316

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 6/153 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P  +
Sbjct: 118 VGWNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLP--I 175

Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             + +   NP    ++  IF  + W ++ N   G    P D+  VA   +++ W+    I
Sbjct: 176 GLLVFKGANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTKI 232

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           + P + PY +TG   A G AW   + +E+ + G
Sbjct: 233 LFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 265



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 159 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 210

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 211 PQDYLNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 265


>gi|126641766|ref|YP_001084750.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii ATCC 17978]
          Length = 225

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 32  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 85

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 86  IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 145

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 146 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 198



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/226 (18%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++  +     + +  ++   +  R++   V++ L       LA + ++L   L+P L
Sbjct: 9   PLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 68

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++++ IP + ++   ++ F +        +E + IF  F   ++ +  +    +  +   
Sbjct: 69  EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 120

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L   ++S   S     + + +P ++P ++  + + M   WF +V +EMI          G
Sbjct: 121 LVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 174

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           IG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 175 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 216


>gi|167840220|ref|ZP_02466904.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 284

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI I     +   + P  +     P   + PL+V       
Sbjct: 94  SLSRIATAFALAVVTAIPVGILIATNRIVRGVVDPVVEFYRPIPPLAYLPLMVVWFGIGD 153

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T ++  R+++LP   P
Sbjct: 154 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRFKLLRHVVLPSALP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 209 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMLYSASRFLVTDVVIAGILVIGA 262

Query: 565 FVLALN 570
             LAL 
Sbjct: 263 IALALE 268


>gi|271963354|ref|YP_003337550.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506529|gb|ACZ84807.1| ABC transporter, permease protein [Streptosporangium roseum DSM
           43021]
          Length = 263

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 19/190 (10%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A +I   VG+ +G RP     + P  Q   A P  +  P  ++    + + P + +++
Sbjct: 77  VLAGVIGTAVGLVLGRRPLYFRFVDPLVQFARAIPPPMLLPFFMAL---FAIGPQMQINV 133

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + +FG  W +L N   GA      + + A  F ++  +    ++LP   P    G   + 
Sbjct: 134 I-VFGIIWPVLINAAEGARHIDRQYVDTARVFGLSLKQRLFLLVLPAAMPKIFAGLRVSL 192

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFV 566
             A    ++SE+         T G+G  + ++      P V        VLG ++   F+
Sbjct: 193 SLALILMVISELVG------STDGIGFQLLDAQRSYDLPGVWGTIVVLGVLGYVLNSAFL 246

Query: 567 LALNRFL-WH 575
            A  R L WH
Sbjct: 247 AAERRVLSWH 256


>gi|170765814|ref|ZP_02900625.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia albertii TW07627]
 gi|170124960|gb|EDS93891.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia albertii TW07627]
          Length = 353

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 170 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 224

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 225 TI---LGINQVPADLIEASRSFGASPHQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 277

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 278 VVIASMIAVG-------GLGQMVLRGIGRLDM 302


>gi|293568393|ref|ZP_06679714.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1071]
 gi|291588914|gb|EFF20741.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1071]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|227552551|ref|ZP_03982600.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecium TX1330]
 gi|257896894|ref|ZP_05676547.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com12]
 gi|293378476|ref|ZP_06624639.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
 gi|227178300|gb|EEI59272.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecium TX1330]
 gi|257833459|gb|EEV59880.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com12]
 gi|292642805|gb|EFF60952.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
          Length = 574

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|226314655|ref|YP_002774551.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
 gi|226097605|dbj|BAH46047.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 281

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 25/201 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +++  T   +L+A +IS++         AK+  +  V+ P+LD MQ++P   +L    ++
Sbjct: 91  EHSMETLALVLTAGLISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYL-IPAIF 149

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F  L  GKV G   + IFA+  T ++ N+       +  +P DL E S +F  + WQK  
Sbjct: 150 FFGL--GKVPGVIASVIFAMPPTIRLTNL------GIRQVPADLIEASEAFGSTYWQKLT 201

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+ +  
Sbjct: 202 KVQLPIAKTTMMAGINQSIMLALS----------MVVIA-SMIGAKGLGADVYRAVTQIK 250

Query: 238 LLAILYAMLTMLGVIFLYDQL 258
           +     A L ++ +  L D+L
Sbjct: 251 IGEGFEAGLAIVILAILLDRL 271


>gi|296159222|ref|ZP_06842048.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890481|gb|EFG70273.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 283

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L+EV+R F  SGWQ+  YL +P ++P L   + ++ +  W  +V 
Sbjct: 163 VTLSTLQGFRQTPATLDEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 222

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 223 VELVASSE 230



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  + + G    P    EVA  F  +GW+   Y++LP   P   TG   A   AW A +V
Sbjct: 163 VTLSTLQGFRQTPATLDEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E+ +       + GLG  I    +      V+  V+++     A+NR L
Sbjct: 223 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266


>gi|21227463|ref|NP_633385.1| ABC transporter permease [Methanosarcina mazei Go1]
 gi|20905834|gb|AAM31057.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
          Length = 262

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++I++ IP L ++ F +V+F   +         AA F +F   ++ +  + Y    N+
Sbjct: 100 PIIEILRPIPPLAWIPFAIVWFGLTHQ--------AAGFVVFAGMIFPIIINTYTGFKNV 151

Query: 162 PRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           PR   E ++    +       Y+ +P +MP +   + ++M  GW  +VA+EM  V +
Sbjct: 152 PRVYVEAAKVLGCTRNIDLIRYIAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSN 208


>gi|300906825|ref|ZP_07124506.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300401426|gb|EFJ84964.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|194433050|ref|ZP_03065333.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella dysenteriae 1012]
 gi|194418777|gb|EDX34863.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella dysenteriae 1012]
 gi|332087399|gb|EGI92527.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella boydii 5216-82]
 gi|332088693|gb|EGI93806.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 155-74]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|260554118|ref|ZP_05826379.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Acinetobacter sp. RUH2624]
 gi|260404746|gb|EEW98255.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Acinetobacter sp. RUH2624]
          Length = 284

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F +        +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S       + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           MI          GIG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|257888218|ref|ZP_05667871.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,141,733]
 gi|257824272|gb|EEV51204.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,141,733]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|114321735|ref|YP_743418.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228129|gb|ABI57928.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 279

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +AIF IF   VW +  +    +  + +DL  V+R+ +LS  +  + + +P + P ++  M
Sbjct: 152 SAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPTILTGM 211

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLY 255
            +++   W  +VA+EM+V G       G+G ++       DL ++++A+L M+G++  + 
Sbjct: 212 RIAIGISWLVIVAAEMLVGGT------GVGYFVWNQWNNLDLTSVIFAVL-MIGIVGMIL 264

Query: 256 DQLL 259
           D +L
Sbjct: 265 DSML 268



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 12/179 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A ++ IP+G  +G  P +   + P+ Q+L       + PL     + Y +  ++  ++ 
Sbjct: 101 LAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPL-----ALYIIQDSVQSAIF 155

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +IF  + W IL N   G +    D   VA +  ++  +    +ILP   P  +TG   A 
Sbjct: 156 VIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPTILTGMRIAI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +W   + +E+   G      TG+G ++           V+  VL++    + L+  L
Sbjct: 216 GISWLVIVAAEMLVGG------TGVGYFVWNQWNNLDLTSVIFAVLMIGIVGMILDSML 268


>gi|312199718|ref|YP_004019779.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311231054|gb|ADP83909.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 282

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 8/148 (5%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P A  + A P     PL  +  S     P   +  +++F   + +  N + G    P+  
Sbjct: 118 PLAAAMNAVPIIALAPLFNTMFSTTSAVPRRLVVAIVVF---FPVFVNTVRGLRQVPDVQ 174

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +E+  S  +  WR+ R + LPG  PY  TG   A   A  A++VSE     +   R  GL
Sbjct: 175 RELMRSLAVGPWRFARTVQLPGAVPYIFTGFRLASSLAVIAAVVSE-----YFGGRQNGL 229

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           G+ I  +    ++P     V   C   L
Sbjct: 230 GSRITSAASNTAYPRAWAFVAAACVLGL 257


>gi|293570838|ref|ZP_06681885.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E980]
 gi|291609106|gb|EFF38381.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E980]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|146318758|ref|YP_001198470.1| phosphate ABC transporter permease [Streptococcus suis 05ZYH33]
 gi|223933467|ref|ZP_03625451.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptococcus suis 89/1591]
 gi|253751855|ref|YP_003024996.1| phosphate ABC transporter permease [Streptococcus suis SC84]
 gi|253753678|ref|YP_003026819.1| phosphate ABC transporter permease [Streptococcus suis P1/7]
 gi|253755442|ref|YP_003028582.1| phosphate ABC transporter permease [Streptococcus suis BM407]
 gi|330832920|ref|YP_004401745.1| ABC-type phosphate transport system, permease [Streptococcus suis
           ST3]
 gi|145689564|gb|ABP90070.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|223897840|gb|EEF64217.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptococcus suis 89/1591]
 gi|251816144|emb|CAZ51768.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251817906|emb|CAZ55678.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819924|emb|CAR46006.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292558425|gb|ADE31426.1| Binding-protein-dependent transport systems related protein
           [Streptococcus suis GZ1]
 gi|329307143|gb|AEB81559.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis ST3]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P+++++  IP  + GF+   VV  +  +++ G   G  L+ +F +F   +  
Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +TF    SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A
Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231

Query: 210 SEMIVVGDTVIP 221
            +M+V    VIP
Sbjct: 232 IQMVVGNSAVIP 243


>gi|300922748|ref|ZP_07138837.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300420933|gb|EFK04244.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|24113982|ref|NP_708492.1| glycine betaine transporter membrane protein [Shigella flexneri 2a
           str. 301]
 gi|30064045|ref|NP_838216.1| glycine betaine transporter membrane protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806689|ref|YP_690209.1| glycine betaine transporter membrane protein [Shigella flexneri 5
           str. 8401]
 gi|24053095|gb|AAN44199.1| glycine betaine/L-proline transport system permease protein
           [Shigella flexneri 2a str. 301]
 gi|30042301|gb|AAP18026.1| glycine betaine/L-proline transport system permease protein
           [Shigella flexneri 2a str. 2457T]
 gi|110616237|gb|ABF04904.1| high-affinity transport system for glycine betaine and proline
           [Shigella flexneri 5 str. 8401]
 gi|281602054|gb|ADA75038.1| putative ABC-type proline/glycine betaine transport system,
           permease component [Shigella flexneri 2002017]
 gi|313648328|gb|EFS12772.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 2a str. 2457T]
 gi|332753396|gb|EGJ83776.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 4343-70]
 gi|332753903|gb|EGJ84278.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-671]
 gi|332755699|gb|EGJ86062.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 2747-71]
 gi|332765628|gb|EGJ95841.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
 gi|333000638|gb|EGK20215.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-218]
 gi|333015889|gb|EGK35225.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-304]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|16130592|ref|NP_417164.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109471|ref|AP_003251.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|157162129|ref|YP_001459447.1| glycine betaine transporter membrane protein [Escherichia coli HS]
 gi|170019070|ref|YP_001724024.1| glycine betaine transporter membrane protein [Escherichia coli ATCC
           8739]
 gi|170082263|ref|YP_001731583.1| glycine betaine ABC transporter membrane protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188496143|ref|ZP_03003413.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 53638]
 gi|194439438|ref|ZP_03071514.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 101-1]
 gi|238901822|ref|YP_002927618.1| glycine betaine transporter subunit [Escherichia coli BW2952]
 gi|253772461|ref|YP_003035292.1| glycine betaine transporter membrane protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037720|ref|ZP_04871778.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43]
 gi|254162615|ref|YP_003045723.1| glycine betaine transporter membrane protein [Escherichia coli B
           str. REL606]
 gi|256024810|ref|ZP_05438675.1| glycine betaine transporter membrane protein [Escherichia sp.
           4_1_40B]
 gi|293415929|ref|ZP_06658569.1| glycine betaine transporter membrane protein [Escherichia coli
           B185]
 gi|297517416|ref|ZP_06935802.1| glycine betaine transporter membrane protein [Escherichia coli
           OP50]
 gi|300930531|ref|ZP_07145927.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300949074|ref|ZP_07163121.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957449|ref|ZP_07169662.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301026688|ref|ZP_07190099.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301645343|ref|ZP_07245290.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307139370|ref|ZP_07498726.1| glycine betaine transporter membrane protein [Escherichia coli
           H736]
 gi|312973111|ref|ZP_07787284.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1827-70]
 gi|331643366|ref|ZP_08344497.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H736]
 gi|130992|sp|P14176|PROW_ECOLI RecName: Full=Glycine betaine/L-proline transport system permease
           protein proW
 gi|147374|gb|AAA24428.1| proW peptide [Escherichia coli]
 gi|1789033|gb|AAC75725.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|1800066|dbj|BAA16543.1| glycine betaine transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|157067809|gb|ABV07064.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli HS]
 gi|169753998|gb|ACA76697.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169890098|gb|ACB03805.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188491342|gb|EDU66445.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 53638]
 gi|194421614|gb|EDX37625.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 101-1]
 gi|226839344|gb|EEH71365.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43]
 gi|238861367|gb|ACR63365.1| glycine betaine transporter subunit [Escherichia coli BW2952]
 gi|242378240|emb|CAQ33015.1| proW, subunit of proline ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323505|gb|ACT28107.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974516|gb|ACT40187.1| glycine betaine transporter subunit [Escherichia coli B str.
           REL606]
 gi|253978683|gb|ACT44353.1| glycine betaine transporter subunit [Escherichia coli BL21(DE3)]
 gi|260448264|gb|ACX38686.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|291432118|gb|EFF05100.1| glycine betaine transporter membrane protein [Escherichia coli
           B185]
 gi|299879610|gb|EFI87821.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300315805|gb|EFJ65589.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300451460|gb|EFK15080.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300461587|gb|EFK25080.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|301076377|gb|EFK91183.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309703043|emb|CBJ02375.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli ETEC H10407]
 gi|310333053|gb|EFQ00267.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1827-70]
 gi|315137291|dbj|BAJ44450.1| glycine betaine transporter membrane protein [Escherichia coli DH1]
 gi|315615065|gb|EFU95702.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 3431]
 gi|323935628|gb|EGB31945.1| inner membrane transport system [Escherichia coli E1520]
 gi|323941486|gb|EGB37669.1| inner membrane transport system [Escherichia coli E482]
 gi|323960576|gb|EGB56203.1| inner membrane transport system [Escherichia coli H489]
 gi|323971477|gb|EGB66712.1| inner membrane transport system [Escherichia coli TA007]
 gi|331036837|gb|EGI09061.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H736]
 gi|332344560|gb|AEE57894.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli UMNK88]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|319758210|gb|ADV70152.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis JS14]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P+++++  IP  + GF+   VV  +  +++ G   G  L+ +F +F   +  
Sbjct: 113 KRGAKILQPVIELLVGIPSGVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +TF    SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A
Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231

Query: 210 SEMIVVGDTVIP 221
            +M+V    VIP
Sbjct: 232 IQMVVGNSAVIP 243


>gi|74313249|ref|YP_311668.1| glycine betaine transporter membrane protein [Shigella sonnei
           Ss046]
 gi|73856726|gb|AAZ89433.1| high-affinity transport system for glycine betaine and proline
           [Shigella sonnei Ss046]
 gi|323167147|gb|EFZ52865.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella sonnei 53G]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|293553996|ref|ZP_06674598.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1039]
 gi|291601853|gb|EFF32103.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1039]
          Length = 574

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|167841837|ref|ZP_02468521.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia thailandensis MSMB43]
          Length = 295

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + +LF FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVLFAFVLTSLAVSTRIGRDVLSMLTSMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGLRQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|21226143|ref|NP_632065.1| glycine betaine transporter, permease [Methanosarcina mazei Go1]
 gi|20904368|gb|AAM29737.1| Glycine betaine transporter, permease protein [Methanosarcina mazei
           Go1]
          Length = 276

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 15/142 (10%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL + +S+  ++L+       LAAKS     VL PILD+MQ++P   +L   +++F 
Sbjct: 91  SMETLSLVISSAFLALVIGIPLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFF- 149

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               G V G     +FA+  T ++ N+       +  +PR+L+EV+ +F  + WQK   +
Sbjct: 150 --GLGNVPGMIATLVFAMPPTIRLTNL------GIRQVPRELKEVADAFGSTPWQKLVKV 201

Query: 184 GVPFSMP----GLVWNMMMSMS 201
            +P ++P    G+   +M+S+S
Sbjct: 202 ELPAALPTIMAGVNQCIMLSLS 223


>gi|69245959|ref|ZP_00603731.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|293563167|ref|ZP_06677625.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1162]
 gi|294623125|ref|ZP_06702011.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           U0317]
 gi|314939370|ref|ZP_07846611.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|314941573|ref|ZP_07848458.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|314949600|ref|ZP_07852924.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
 gi|314953707|ref|ZP_07856582.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|314992163|ref|ZP_07857607.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|314997654|ref|ZP_07862584.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|68195489|gb|EAN09933.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|281335146|gb|ADA62230.1| Glycine betaine ABC transport system, permease protein OpuAB /
           Glycine betaine ABC transport system, glycine
           betaine-binding protein OpuAC [Enterococcus faecium]
 gi|291597494|gb|EFF28659.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           U0317]
 gi|291604858|gb|EFF34334.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1162]
 gi|313588289|gb|EFR67134.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|313593266|gb|EFR72111.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|313594291|gb|EFR73136.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|313599632|gb|EFR78475.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|313641355|gb|EFS05935.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|313644024|gb|EFS08604.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|333001015|gb|EGK20585.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-272]
 gi|333015481|gb|EGK34820.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-227]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|289567008|ref|ZP_06447409.1| ABC transporter, glycine-betaine/proline permease [Enterococcus
           faecium D344SRF]
 gi|294615264|ref|ZP_06695141.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1636]
 gi|294617327|ref|ZP_06696966.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1679]
 gi|289161209|gb|EFD09108.1| ABC transporter, glycine-betaine/proline permease [Enterococcus
           faecium D344SRF]
 gi|291591861|gb|EFF23493.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1636]
 gi|291596400|gb|EFF27654.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1679]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|256019540|ref|ZP_05433405.1| glycine betaine transporter membrane protein [Shigella sp. D9]
 gi|332280664|ref|ZP_08393077.1| glycine betaine/L-proline transport system permease proW [Shigella
           sp. D9]
 gi|332103016|gb|EGJ06362.1| glycine betaine/L-proline transport system permease proW [Shigella
           sp. D9]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|156935089|ref|YP_001439005.1| taurine transporter subunit [Cronobacter sakazakii ATCC BAA-894]
 gi|156533343|gb|ABU78169.1| hypothetical protein ESA_02940 [Cronobacter sakazakii ATCC BAA-894]
          Length = 275

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 21/186 (11%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IPVGI +G  P + + + P  +L    P   + PL+V        +  L L  L IF 
Sbjct: 97  IGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETSKVL-LIYLAIFA 155

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  + +AG  +        A S   + W+   ++ILPG  P  +TG     G  W+
Sbjct: 156 P---VAMSALAGVKSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVGWS 212

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVL-----ALNR 571
             + +E+ +       T GLG ++ +S  +    +VVL    V+ +  F+L     AL R
Sbjct: 213 TLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALTR 265

Query: 572 FL--WH 575
            L  WH
Sbjct: 266 RLTPWH 271



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P++++ + IP L +L   V++F        IG E + +  I+ +    +  S    +
Sbjct: 114 ILDPLIELYRPIPPLAYLPLMVIWFG-------IG-ETSKVLLIYLAIFAPVAMSALAGV 165

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  +     ++S   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 166 KSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|15803198|ref|NP_289230.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832795|ref|NP_311568.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750921|ref|ZP_02775943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168755423|ref|ZP_02780430.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168762473|ref|ZP_02787480.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168768769|ref|ZP_02793776.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168774790|ref|ZP_02799797.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|168778660|ref|ZP_02803667.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787933|ref|ZP_02812940.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168800563|ref|ZP_02825570.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC508]
 gi|193065974|ref|ZP_03047033.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E22]
 gi|194427910|ref|ZP_03060456.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B171]
 gi|195938432|ref|ZP_03083814.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807590|ref|ZP_03249927.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814097|ref|ZP_03255426.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820172|ref|ZP_03260492.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396362|ref|YP_002272144.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326993|ref|ZP_03443076.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218690806|ref|YP_002399018.1| glycine betaine transporter membrane protein [Escherichia coli
           ED1a]
 gi|218701173|ref|YP_002408802.1| glycine betaine transporter membrane protein [Escherichia coli
           IAI39]
 gi|218706178|ref|YP_002413697.1| glycine betaine transporter membrane protein [Escherichia coli
           UMN026]
 gi|254794625|ref|YP_003079462.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|260845326|ref|YP_003223104.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O103:H2 str. 12009]
 gi|261225975|ref|ZP_05940256.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256767|ref|ZP_05949300.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284011|ref|YP_003500829.1| Glycine betaine/L-proline ABC transporter permease protein
           [Escherichia coli O55:H7 str. CB9615]
 gi|293406175|ref|ZP_06650101.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1412]
 gi|293412036|ref|ZP_06654759.1| glycine betaine transporter membrane protein [Escherichia coli
           B354]
 gi|298381912|ref|ZP_06991509.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1302]
 gi|300898659|ref|ZP_07116980.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300941046|ref|ZP_07155565.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|301306005|ref|ZP_07212085.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301327382|ref|ZP_07220631.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|306812441|ref|ZP_07446639.1| glycine betaine transporter membrane protein [Escherichia coli
           NC101]
 gi|331648399|ref|ZP_08349487.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M605]
 gi|331654161|ref|ZP_08355161.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M718]
 gi|331658789|ref|ZP_08359731.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA206]
 gi|331669416|ref|ZP_08370262.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA271]
 gi|12517117|gb|AAG57788.1|AE005496_11 high-affinity transport system for glycine betaine and proline
           [Escherichia coli O157:H7 str. EDL933]
 gi|13363012|dbj|BAB36964.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|187769535|gb|EDU33379.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|188014969|gb|EDU53091.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|189003312|gb|EDU72298.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189357321|gb|EDU75740.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189362133|gb|EDU80552.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189367256|gb|EDU85672.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372114|gb|EDU90530.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189377180|gb|EDU95596.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC508]
 gi|192926388|gb|EDV81023.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E22]
 gi|194414143|gb|EDX30419.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B171]
 gi|208727391|gb|EDZ76992.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735374|gb|EDZ84061.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740295|gb|EDZ87977.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157762|gb|ACI35195.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209762218|gb|ACI79421.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762220|gb|ACI79422.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762222|gb|ACI79423.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762224|gb|ACI79424.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762226|gb|ACI79425.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|217319360|gb|EEC27785.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218371159|emb|CAR18990.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218428370|emb|CAR09299.2| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218433275|emb|CAR14175.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222034378|emb|CAP77119.1| glycine betaine/L-proline transport system permease [Escherichia
           coli LF82]
 gi|254594025|gb|ACT73386.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257760473|dbj|BAI31970.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O103:H2 str. 12009]
 gi|290763884|gb|ADD57845.1| Glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O55:H7 str. CB9615]
 gi|291426181|gb|EFE99213.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1412]
 gi|291468807|gb|EFF11298.1| glycine betaine transporter membrane protein [Escherichia coli
           B354]
 gi|298277052|gb|EFI18568.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1302]
 gi|300357687|gb|EFJ73557.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300454210|gb|EFK17703.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300838716|gb|EFK66476.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846036|gb|EFK73796.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|305854479|gb|EFM54917.1| glycine betaine transporter membrane protein [Escherichia coli
           NC101]
 gi|312947213|gb|ADR28040.1| glycine betaine transporter membrane protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315254454|gb|EFU34422.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315298698|gb|EFU57952.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320189009|gb|EFW63668.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. EC1212]
 gi|320640667|gb|EFX10203.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320646032|gb|EFX15009.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320651332|gb|EFX19763.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320656723|gb|EFX24611.1| glycine betaine transporter membrane protein [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662266|gb|EFX29663.1| glycine betaine transporter membrane protein [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667317|gb|EFX34275.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323159819|gb|EFZ45791.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli E128010]
 gi|323188440|gb|EFZ73726.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli RN587/1]
 gi|323966930|gb|EGB62358.1| inner membrane transport system [Escherichia coli M863]
 gi|323978711|gb|EGB73793.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324005775|gb|EGB74994.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|326338607|gb|EGD62433.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. 1044]
 gi|326342865|gb|EGD66633.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. 1125]
 gi|327251396|gb|EGE63082.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli STEC_7v]
 gi|330908709|gb|EGH37223.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli AA86]
 gi|331042146|gb|EGI14288.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M605]
 gi|331047543|gb|EGI19620.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M718]
 gi|331053371|gb|EGI25400.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA206]
 gi|331063084|gb|EGI34997.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA271]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|296127569|ref|YP_003634821.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira
           murdochii DSM 12563]
 gi|296019385|gb|ADG72622.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 275

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 17/206 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V+ +T Q++L       IT+ RV    IIA II +P+G+ +G+   I   + P    +  
Sbjct: 70  VDPYTVQNLL-------ITLERVFRGFIIACIIGLPLGLIMGYSKPILLAVSPIINSIRQ 122

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL    + ++ L     +  L+     + ++ N I G      ++   A S  
Sbjct: 123 VPIMAWIPL---AIVWFGLGDGPTI-FLITMSAIFPLIINTIDGVRGIDPNYINAARSMG 178

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    IILPG  P ++TG   A G  W + I +E  +       + G G  + E+ 
Sbjct: 179 ARNIDIMFDIILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQ 232

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++   P++   +++      +++R L
Sbjct: 233 QRLETPKLYALMIVSAIIGFSMDRVL 258


>gi|170680258|ref|YP_001744829.1| glycine betaine transporter membrane protein [Escherichia coli
           SMS-3-5]
 gi|170517976|gb|ACB16154.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli SMS-3-5]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|86361141|ref|YP_473028.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285243|gb|ABC94301.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 295

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 15/192 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    V+S+        L A+S RL  V+ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTVLSIAIGIPIGILMARSDRLQRVVNPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV G     I+AI       M       +  + +D+ E + +F  S  QK + + +P
Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSRAQKLFKVQLP 213

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  L
Sbjct: 214 LALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266

Query: 247 TMLGVIFLYDQL 258
            ++G+  ++D++
Sbjct: 267 AIVGIAIIFDRV 278


>gi|26249073|ref|NP_755113.1| glycine betaine transporter membrane protein [Escherichia coli
           CFT073]
 gi|215487999|ref|YP_002330430.1| glycine betaine transporter membrane protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|227888212|ref|ZP_04006017.1| glycine betaine transporter membrane protein [Escherichia coli
           83972]
 gi|301019056|ref|ZP_07183267.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|312965593|ref|ZP_07779823.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 2362-75]
 gi|331664235|ref|ZP_08365141.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA143]
 gi|331674199|ref|ZP_08374959.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA280]
 gi|331684296|ref|ZP_08384888.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H299]
 gi|26109480|gb|AAN81683.1|AE016765_85 Glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli CFT073]
 gi|215266071|emb|CAS10491.1| high-affinity transport system for glycine betaine and proline;
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|227834852|gb|EEJ45318.1| glycine betaine transporter membrane protein [Escherichia coli
           83972]
 gi|284922620|emb|CBG35708.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 042]
 gi|300399409|gb|EFJ82947.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|307554654|gb|ADN47429.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli ABU 83972]
 gi|312289742|gb|EFR17632.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 2362-75]
 gi|331058166|gb|EGI30147.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA143]
 gi|331068293|gb|EGI39688.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA280]
 gi|331077911|gb|EGI49117.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H299]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|302023877|ref|ZP_07249088.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           suis 05HAS68]
          Length = 304

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P+++++  IP  + GF+   VV  +  +++ G   G  L+ +F +F   +  
Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +TF    SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A
Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231

Query: 210 SEMIVVGDTVIP 221
            +M+V    VIP
Sbjct: 232 IQMVVGNSAVIP 243


>gi|301050521|ref|ZP_07197397.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300297777|gb|EFJ54162.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|159906170|ref|YP_001549832.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
 gi|159887663|gb|ABX02600.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
          Length = 277

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)

Query: 66  SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL ++ ++ +I+L+F      + A+S+ + M+L P+LD+MQ++P L +L   V++F 
Sbjct: 90  SMITLSLIITSTLIALVFGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V G     IFA+       +T      +  +  +L EV R+F  + WQ    + 
Sbjct: 149 --GIGEVPGVIATVIFAM--PPAIKLT---ALGIEQVSGELIEVGRAFGGTSWQILTKIE 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L   L A
Sbjct: 202 LPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEA 254

Query: 245 --MLTMLGVIF 253
              +T L VIF
Sbjct: 255 GIAVTFLAVIF 265


>gi|88801194|ref|ZP_01116736.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
 gi|88776068|gb|EAR07301.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
          Length = 357

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             ++  LS +V S+LF  V         A+S R   ++ P+LD MQ+ P   +L   V+ 
Sbjct: 145 EESMTTLSLVVTSVLFCMVIGIPTGIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVML 204

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V G  +  IFA+    V  +T      +  +P DL E + SF     Q  + 
Sbjct: 205 F---GIGNVPGVVVTIIFAV--PPVIRLT---NLGIRQVPEDLIEAANSFGADSKQMLFK 256

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +P +MP ++  +  ++  G   VV + MI VG
Sbjct: 257 VQLPLAMPTIMAGVNQTLMLGLSMVVIASMISVG 290


>gi|330998254|ref|ZP_08322079.1| glycine betaine transport system permease protein opuAB
           [Paraprevotella xylaniphila YIT 11841]
 gi|329568643|gb|EGG50444.1| glycine betaine transport system permease protein opuAB
           [Paraprevotella xylaniphila YIT 11841]
          Length = 271

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++LL        A KS R   +L P+LD MQ++P   +L   V++
Sbjct: 83  EETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLF 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V GA    IFA+    V  +T      +  +P+++ E +RSF  +  Q  + 
Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPKNVIEAARSFGATPRQLLFK 194

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +P ++P    G+   +MM++S     VV S MI  G 
Sbjct: 195 VQLPLALPTIQTGINQTIMMALS----MVVVSAMISAGG 229


>gi|325568907|ref|ZP_08145200.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|325157945|gb|EGC70101.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 574

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS++V S++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T ++ N+       +  I R+L E S SF  +GWQK   L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLIKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    + G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|322508395|gb|ADX03849.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii 1656-2]
 gi|323518017|gb|ADX92398.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
          Length = 251

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 58  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 111

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 112 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 171

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 172 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 224



 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 22  VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 81

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F +        +E + IF  F   ++ + 
Sbjct: 82  RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 133

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S       + +P ++P ++  + + M   WF +V +E
Sbjct: 134 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 193

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           MI          GIG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 194 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 242


>gi|297617206|ref|YP_003702365.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297145043|gb|ADI01800.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 250

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 19/219 (8%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           ETT+ RD+V+ V       +  Q    T  R L+  ++S L   V   LA  +  +   L
Sbjct: 39  ETTM-RDLVNAV----RSAAFWQSVEATVYRGLAGFLVSCLAGAVTGFLAGFNSVVFWAL 93

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P + ++++ P++ F+   +++F           EL  IF  F      +  ++ Q + N
Sbjct: 94  QPFMTVIRTTPVMSFILLALIWFRT---------ELVPIFVSFLIAFPIIFDNVVQGIKN 144

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + R L E++R FR+  W+  + L +P  +P L      +M   W  ++A+E++       
Sbjct: 145 VDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMGLTWKVIIAAEILSQ----- 199

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           P  GIG+ +  A    +   IL   + ++ + F+++ +L
Sbjct: 200 PTFGIGTQMQNARIYLETARILSWTVVIVFISFVFESIL 238



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G   GF   +   +QPF  ++   P   F  ++++ + +      +++S L+ F     I
Sbjct: 80  GFLAGFNSVVFWALQPFMTVIRTTPVMSF--ILLALIWFRTELVPIFVSFLIAFP---II 134

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             NV+ G         E+A  F +  WR    + +P I P+   G  +A G  W   I +
Sbjct: 135 FDNVVQGIKNVDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMGLTWKVIIAA 194

Query: 525 EVASWGHIHLRTTGLGAYIAESTEK 549
           E+ S     + T    A I   T +
Sbjct: 195 EILSQPTFGIGTQMQNARIYLETAR 219


>gi|257885408|ref|ZP_05665061.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,501]
 gi|257821264|gb|EEV48394.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,501]
          Length = 571

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 95  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244


>gi|89901332|ref|YP_523803.1| nitrate transport permease [Rhodoferax ferrireducens T118]
 gi|89346069|gb|ABD70272.1| nitrate transport permease [Rhodoferax ferrireducens T118]
          Length = 314

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W   +++ RV V   +A+ + IP G  IG    +S    P   LL       + P  +
Sbjct: 116 VGWNILMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLAWLP--I 173

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + +   NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 174 GLLVFKGANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKIL 231

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
            P + PY +TG   A G AW   + +E+ + G
Sbjct: 232 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 263



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 157 PLIGLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 208

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 209 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 263


>gi|320180199|gb|EFW55135.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella boydii ATCC 9905]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|300310541|ref|YP_003774633.1| nitrate transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300073326|gb|ADJ62725.1| ABC-type nitrate transporter, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F +  P        AAI++IF   +W M  +    +  +
Sbjct: 150 PIISLLRPVSPLAWLPIGLLVFKSANP--------AAIWSIFICSIWPMIINTAVGVQRV 201

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 202 PQDYMNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 256



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV     +A+++ IP+G  IG    ++    P   LL       + P  +  
Sbjct: 111 WNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLAWLP--IGL 168

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +   NP    S+ +   + W ++ N   G    P D+  VA   +++ W+    I+ P
Sbjct: 169 LVFKSANPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKILFP 226

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + PY +TG   + G AW   + +E+ + G
Sbjct: 227 SVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 256


>gi|260555053|ref|ZP_05827274.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260411595|gb|EEX04892.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 284

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/226 (18%), Positives = 99/226 (43%), Gaps = 18/226 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++  +     + +  ++   +  R++   V++ L       LA + ++L   L+P L
Sbjct: 68  PLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 127

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++++ IP + ++   ++ F +        +E + IF  F   ++ +  +    +  +   
Sbjct: 128 EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 179

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L   ++S   S       + +P ++P ++  + + M   WF +V +EMI          G
Sbjct: 180 LVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 233

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           IG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 234 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|148547319|ref|YP_001267421.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148511377|gb|ABQ78237.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 251

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R+++ +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +      P   +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581
           I ++ ++ ++ E++  VL++    FVL AL R L H  +++G
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251


>gi|320186469|gb|EFW61197.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella flexneri CDC 796-83]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T      +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++      VV +
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLALSMVVIA 282

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            MI VG       G+G  +   I   D+
Sbjct: 283 SMIAVG-------GLGQMVLRGIGRLDM 303


>gi|304405835|ref|ZP_07387493.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304345078|gb|EFM10914.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 292

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++FRV    ++A II IP+G+  G   +  + I+P  + +   PA  F PL++  V   
Sbjct: 103 VSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIEPPMEFIRYMPAVAFIPLIMVWVGIG 162

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 W  +++IF G  + ++  V       P D  + + +   + W+    ++LP I 
Sbjct: 163 E-----WAKIMLIFIGCFFQLVLMVADNVRRVPRDLLQASFTLGASRWKVIETVLLPAIQ 217

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   +V+E+ +        +GLG  I ++    +  ++ +G++++ 
Sbjct: 218 PQLMHTLRLILGWAWTYLVVAELVA------VNSGLGYAIMKAQRYLNTDQIFVGIIVIG 271

Query: 564 CFVLALNR 571
              L  +R
Sbjct: 272 LLGLISDR 279


>gi|254438593|ref|ZP_05052087.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254039|gb|EDY78353.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 357

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452
           +IASII IP+GI  G     ++ + P  Q+        + P+V   VS  +   + W   
Sbjct: 162 LIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221

Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                ++ +   + W  L N   G S+   D   V+    +  +     ++LP   P   
Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333

Query: 568 ALNRFL 573
            +  FL
Sbjct: 334 GIIGFL 339



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VSR  +++ + K   L +P ++P +   + +S+  GW 
Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+ T+  + FL D++++  
Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347

Query: 261 RPMIVWSNK 269
           + M  +SN 
Sbjct: 348 QSMFTFSNS 356


>gi|193077347|gb|ABO12148.2| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii ATCC 17978]
          Length = 284

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 23/250 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  F + +GI+N           P D++  +     + +  ++   +  R++   V++ 
Sbjct: 49  GLAQFKINLGIVNF-----SNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAA 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       LA + ++L   L+P L++++ IP + ++   ++ F +        +E + IF
Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F   ++ +  +    +  +   L   ++S   S     + + +P ++P ++  + + M
Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGM 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              WF +V +EMI          GIG +   +   Q+   I+  M+ ++G + ++   L 
Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268

Query: 261 RPMIVWSNKF 270
           R   V  N+F
Sbjct: 269 R---VIGNRF 275


>gi|261209289|ref|ZP_05923681.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC
           6]
 gi|260076835|gb|EEW64570.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC
           6]
          Length = 571

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 95  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244


>gi|221065520|ref|ZP_03541625.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220710543|gb|EED65911.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 268

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 12/202 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + + L + WL   +M RV     +A+++ IP+G+ IG    +   + P  Q+L   P  
Sbjct: 63  AFSETLGIHWLK--SMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVT 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL    + ++ + PN  +  L+  G  + I+ N   G  +      E A+     G 
Sbjct: 121 AWLPL---SMIFFGVGPNAAI-FLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGA 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +R ++LP   P    G     G AW   +V E+           GLGA I +      
Sbjct: 177 SMFRQVVLPAAMPSIFNGLRLGHGIAWFLIVVGEMTG------VPEGLGAAIMDGRMLSR 230

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+ G++++       +R L
Sbjct: 231 TDVVIAGMVVIGFTGFVTDRLL 252


>gi|82545240|ref|YP_409187.1| glycine betaine transporter membrane protein [Shigella boydii
           Sb227]
 gi|81246651|gb|ABB67359.1| ProW [Shigella boydii Sb227]
 gi|332092004|gb|EGI97082.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella boydii 3594-74]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T      +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++      VV +
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLALSMVVIA 282

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            MI VG       G+G  +   I   D+
Sbjct: 283 SMIAVG-------GLGQMVLRGIGRLDM 303


>gi|91212039|ref|YP_542025.1| glycine betaine transporter membrane protein [Escherichia coli
           UTI89]
 gi|110642804|ref|YP_670534.1| glycine betaine transporter membrane protein [Escherichia coli 536]
 gi|117624914|ref|YP_853857.1| glycine betaine transporter membrane protein [Escherichia coli APEC
           O1]
 gi|191171377|ref|ZP_03032926.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli F11]
 gi|218559670|ref|YP_002392583.1| glycine betaine transporter membrane protein [Escherichia coli S88]
 gi|237706700|ref|ZP_04537181.1| high-affinity transport system for glycine betaine and proline
           [Escherichia sp. 3_2_53FAA]
 gi|300990598|ref|ZP_07179248.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|91073613|gb|ABE08494.1| high-affinity transport system for glycine betaine and proline
           [Escherichia coli UTI89]
 gi|110344396|gb|ABG70633.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli 536]
 gi|115514038|gb|ABJ02113.1| glycine betaine/L-proline transport system permease protein P
           [Escherichia coli APEC O1]
 gi|190908311|gb|EDV67901.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli F11]
 gi|218366439|emb|CAR04191.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|226899740|gb|EEH85999.1| high-affinity transport system for glycine betaine and proline
           [Escherichia sp. 3_2_53FAA]
 gi|294493392|gb|ADE92148.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli IHE3034]
 gi|300305715|gb|EFJ60235.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|307625750|gb|ADN70054.1| glycine betaine transporter membrane protein [Escherichia coli
           UM146]
 gi|320194818|gb|EFW69447.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli WV_060327]
 gi|323951100|gb|EGB46976.1| inner membrane transport system [Escherichia coli H252]
 gi|323957109|gb|EGB52834.1| inner membrane transport system [Escherichia coli H263]
 gi|324014409|gb|EGB83628.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|146320961|ref|YP_001200672.1| phosphate ABC transporter permease [Streptococcus suis 98HAH33]
 gi|145691767|gb|ABP92272.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis 98HAH33]
          Length = 303

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P+++++  IP  + GF+   VV  +  +++ G   G  L+ +F +F   +  
Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +TF    SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A
Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231

Query: 210 SEMIVVGDTVIP 221
            +M+V    VIP
Sbjct: 232 IQMVVGNSAVIP 243


>gi|257880362|ref|ZP_05660015.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,230,933]
 gi|257882213|ref|ZP_05661866.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,502]
 gi|257891020|ref|ZP_05670673.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,410]
 gi|257894273|ref|ZP_05673926.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,408]
 gi|260562336|ref|ZP_05832850.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           C68]
 gi|257814590|gb|EEV43348.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,230,933]
 gi|257817871|gb|EEV45199.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,502]
 gi|257827380|gb|EEV54006.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,410]
 gi|257830652|gb|EEV57259.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,408]
 gi|260073260|gb|EEW61601.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           C68]
          Length = 571

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS+ VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 95  TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T +  N+       +  +P++L E S SF  +  QK + L +P 
Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    M G+    M+S+S          M+V+  ++I  PG+G  +  A++
Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244


>gi|257867410|ref|ZP_05647063.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257873741|ref|ZP_05653394.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257877492|ref|ZP_05657145.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC20]
 gi|257801466|gb|EEV30396.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257807905|gb|EEV36727.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257811658|gb|EEV40478.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC20]
          Length = 574

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS++V S++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T ++ N+       +  I R+L E S SF  +GWQK   L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLIKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    + G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|281179685|dbj|BAI56015.1| glycine/betaine/proline ABC transporter permease component
           [Escherichia coli SE15]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|91783656|ref|YP_558862.1| sulfate ester ABC transporter inner membrane protein [Burkholderia
           xenovorans LB400]
 gi|91687610|gb|ABE30810.1| Putative ABC sulfate ester transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 283

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L+EV+R F  SGWQ+  YL +P ++P L   + ++ +  W  +V 
Sbjct: 163 VTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVV 222

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 223 VELVASSE 230



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  + + G    P    EVA  F  +GW+   Y+ILP   P   TG   A   AW A +V
Sbjct: 163 VTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVV 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E+ +       + GLG  I    +      V+  V+++     A+NR L
Sbjct: 223 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266


>gi|27381358|ref|NP_772887.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354525|dbj|BAC51512.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 257

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 12/179 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV    +A+II +P G+ +G    + + ++PF       PA+ F PL++      
Sbjct: 66  MTIWRVVGGFALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + ++  V     A   D  E A +   +     R ++LP   
Sbjct: 126 ELQ-----KLLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++
Sbjct: 181 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVI 233


>gi|218547805|ref|YP_002381596.1| glycine betaine transporter membrane protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355346|emb|CAQ87953.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|324111312|gb|EGC05294.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496272|gb|EGC94131.1| glycine betaine transporter membrane protein [Escherichia
           fergusonii ECD227]
          Length = 354

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|73669863|ref|YP_305878.1| glycine betaine/L-proline ABC transporter permease [Methanosarcina
           barkeri str. Fusaro]
 gi|72397025|gb|AAZ71298.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           barkeri str. Fusaro]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 21/175 (12%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   +LS+ +++L+       L+AK+  L  +L P+LD MQ++P   +L   +++F   
Sbjct: 91  ETLALVLSSTLLALIIGIPLGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFF--- 147

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183
                   +L  + ++  + V+ M  ++  +   +  +P +L EV+ SF  + WQK   +
Sbjct: 148 --------QLGNVPSMIATVVFAMPPAIRLTNLGIRQVPIELTEVADSFGSTSWQKLSKV 199

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +P ++P +       M+G    ++ S  +VV   +I   G+G  + L I+  D+
Sbjct: 200 ELPVALPTI-------MAGVNQCIMLSLSMVVIAAMIGARGLGYQVLLGIQRVDI 247


>gi|310830348|ref|YP_003965448.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753254|gb|ADO44397.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 303

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 26/177 (14%)

Query: 66  SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL M++   +++++       L A+S R   ++ P+LD+MQ++P   +L   VV F 
Sbjct: 108 SMITLSMVTVCTLVAVIIGLPIGILTARSDRAQRIITPVLDVMQTMPSFVYLIPVVVIF- 166

Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               GKV G     I+A+    ++ N+   +      + R+  E + +F  S  QK W +
Sbjct: 167 --GIGKVPGMIAVVIYAMPPMIRLTNLGIRL------VDREAIEAADAFGSSERQKLWNV 218

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +P ++P    G+   +MM++S     VV + M+ VG       G+G  +  AI  Q
Sbjct: 219 QLPLALPTLMTGVNQTIMMALS----MVVVASMVGVG-------GLGRNVLQAINNQ 264


>gi|300709406|ref|YP_003735220.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
 gi|299123089|gb|ADJ13428.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +  RVVV +++A+   IP+G+ IG        + P  ++    P   + P+ +  + 
Sbjct: 80  AAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPPVAWVPIALLLMP 139

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            +       +  ++  G  + IL N I G     +++   A S        +R++I P  
Sbjct: 140 TFRSG----VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESLGADSREVFRHVIFPAT 195

Query: 503 FPYYVTGAITACGGAWNASIVSE 525
            P  VTG  T  G AW   + +E
Sbjct: 196 LPSIVTGVSTGVGLAWITVVAAE 218



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/160 (18%), Positives = 69/160 (43%), Gaps = 8/160 (5%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P+T    ++ Q+A+ + +R++ AMV++         +   SRR    L P L++ + +P 
Sbjct: 68  PMTGSGATIYQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPP 127

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + ++   ++       G         IF +F    + +  +  + +  +  +    + S 
Sbjct: 128 VAWVPIALLLMPTFRSG--------VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESL 179

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
                + F ++  P ++P +V  +   +   W  VVA+EM
Sbjct: 180 GADSREVFRHVIFPATLPSIVTGVSTGVGLAWITVVAAEM 219


>gi|300087495|ref|YP_003758017.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527228|gb|ADJ25696.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 304

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 15/142 (10%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123
           + TTL + L+A++   +       LAA+S +   +L P+LD MQ+IP   +L   V+ F 
Sbjct: 92  TMTTLSLVLAALIFCAIVGIPLGILAARSDKFAGILRPLLDAMQTIPAFVYLVPVVMLFG 151

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + L PG      L A+       +  +T      +  +P+D+ E  RSF  +  Q  + +
Sbjct: 152 VGLVPG------LIAVIVFALPPIIRLT---DLGIRQVPQDVVEAGRSFGGTNNQILFNI 202

Query: 184 GVPFSMP----GLVWNMMMSMS 201
            +P +MP    GL   +M++MS
Sbjct: 203 QIPLAMPTIMAGLNQTLMLAMS 224


>gi|24112343|ref|NP_706853.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|24051208|gb|AAN42560.1| similar to taurine transport system permease protein [Shigella
           flexneri 2a str. 301]
          Length = 217

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 55  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+ TT
Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKETT 216


>gi|326386854|ref|ZP_08208469.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208657|gb|EGD59459.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 260

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L  + I +    V A LA  SRR    + PI+ I ++IP L      +V+F      K
Sbjct: 69  RVLFGLAIGVTTGIVLALLAGLSRRGEAAVDPIMQIKRTIPTLALTPLFIVWFGIGETPK 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V     A++F ++         +++  +  +   L E +RSF LS  +  W++ +P ++P
Sbjct: 129 VALIAFASMFPVY--------LNLFSGIRGVDARLVEGARSFGLSQAELVWHVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            L+  +  S+S     +V +E I
Sbjct: 181 SLLVGLRYSLSIAILVLVVAEQI 203


>gi|292489868|ref|YP_003532758.1| Taurine transport permease tauC [Erwinia amylovora CFBP1430]
 gi|292900910|ref|YP_003540279.1| taurine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200758|emb|CBJ47891.1| taurine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291555305|emb|CBA23627.1| Taurine transport permease protein tauC [Erwinia amylovora
           CFBP1430]
 gi|312174051|emb|CBX82304.1| Taurine transport permease protein tauC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +P+GI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L L  L IF     +  + +AG  +        A S   + W+   +++LPG  
Sbjct: 141 GETSKIL-LIYLAIFAP---VTMSALAGVKSARQVRLRAARSLGASRWQVLWFVVLPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+  + 
Sbjct: 197 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIATIA 250

Query: 564 CFVLALN 570
               AL 
Sbjct: 251 LIAFALE 257



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 8/161 (4%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           PI     +L Q+ + +  RM+ A++ +++       L   +  L  +L P++++ + +P 
Sbjct: 68  PIGFMDATLWQHLAASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPP 127

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F        IG E + I  I+ +    +T S    + +  +     +RS 
Sbjct: 128 LAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTMSALAGVKSARQVRLRAARSL 179

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 180 GASRWQVLWFVVLPGALPEILTGIRIGLGVGWSTLVAAELI 220


>gi|78060763|ref|YP_367338.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965313|gb|ABB06694.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 247

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LA+ S  +   L+P +  +QS+P +      +V+F   +  K+  A L A F I  + + 
Sbjct: 77  LASASNLVRRTLLPFVTALQSMPKIALAPLLIVWFGYGFASKLAAAVLFAFFPIVVATM- 135

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                    L  +PR L+E  R+   S    FW+L +P ++P L+  + ++M       +
Sbjct: 136 -------GGLAGVPRHLDEHFRALGASAAHTFWHLRLPAALPALMDGLKIAMP------L 182

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD----LLAILYAMLTMLGVIFLYDQLLFRPMI 264
           A    +VG+ +    G+G  I  A           AIL  M+T L ++F Y  +      
Sbjct: 183 AVIGAIVGEFIGAEAGLGHLIVFATSNAQTPLCFAAIL--MVTALAMLF-YGAVELVSRA 239

Query: 265 VW 266
           VW
Sbjct: 240 VW 241


>gi|89895481|ref|YP_518968.1| hypothetical protein DSY2735 [Desulfitobacterium hafniense Y51]
 gi|89334929|dbj|BAE84524.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 255

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 22/249 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMV 77
           + LL+F++VI +  +L        VP     +  I   + S   YA    T  R+L+ + 
Sbjct: 13  YKLLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIHKILTSPDLYAMIPLTAGRLLAGLS 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + +    V   L     ++  VL P++ IMQ++P + ++   +V+F   + GK       
Sbjct: 73  LGVSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFG--FNGK------P 124

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F +  S +  +T ++      I ++L E++  +R S  ++  ++ +P  +P       
Sbjct: 125 AVFIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQ 184

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA--ILYAMLTMLGVI 252
           +++  GW   V +E++   D      GIG  I L    ++ + ++A  IL  +L  L   
Sbjct: 185 IALGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLS-D 237

Query: 253 FLYDQLLFR 261
           FL  + LFR
Sbjct: 238 FLIGKFLFR 246



 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I  T   I  NV AG      +  E+AS +  +  +  R++ILP I PY+ +    A 
Sbjct: 128 IVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIAL 187

Query: 515 GGAWNASIVSEV 526
           G  W  ++++EV
Sbjct: 188 GSGWKIAVMAEV 199


>gi|289809489|ref|ZP_06540118.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 243

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 91  ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 145

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 146 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 198

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 199 VVIASMIAVG-------GLGQMVLRGIGRLDM 223


>gi|193071017|ref|ZP_03051945.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E110019]
 gi|192955675|gb|EDV86150.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E110019]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|162452310|ref|YP_001614677.1| nitrate/nitrite ABC transporter membrane protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162892|emb|CAN94197.1| nitrate/nitrite ABC transporter membrane protein [Sorangium
           cellulosum 'So ce 56']
          Length = 265

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ I++ +  L +L   +V F    P        A +F I    +W    +    + +I
Sbjct: 110 PIIQILRPVSPLAWLPLGLVLFQKPDP--------AGVFTIAMCSMWPTVLNTALGVRSI 161

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+D   V+R  RLS  +  + + +P ++P +     +S+   W  +VA EM+        
Sbjct: 162 PQDYMNVARVLRLSRMKTLFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLTGS----- 216

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            PG+G ++           I+  ++T+  V FL D L+
Sbjct: 217 -PGVGGFLWQEYNSLIYEHIILCIITIGVVGFLLDALM 253



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 18/214 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q +L   W    ++ RV     +A ++  P+G ++G      S   P  Q+L       +
Sbjct: 67  QGILRFTWY---SLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAW 123

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    V +   +P    ++ M   + W  + N   G  + P D+  VA    ++  + 
Sbjct: 124 LPL--GLVLFQKPDPAGVFTIAMC--SMWPTVLNTALGVRSIPQDYMNVARVLRLSRMKT 179

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   PY  TG   + G AW   +  E+ +       + G+G ++ +      + 
Sbjct: 180 LFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLT------GSPGVGGFLWQ-----EYN 228

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            ++   +I+C   + +  FL   L     R L+L
Sbjct: 229 SLIYEHIILCIITIGVVGFLLDALMSLVERRLKL 262


>gi|115523285|ref|YP_780196.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115517232|gb|ABJ05216.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 299

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L   +  F +  P        +AIF IF + +W +  +    + 
Sbjct: 140 LDPIFQVLRTIPPLAWLPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   RL+  + FW + +P + P +   + + +   W  ++A+EM++ G   
Sbjct: 192 NIPQDYRNVAAVVRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV-- 249

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A+  +  + F+ D+ +
Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRAI 285



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 7/120 (5%)

Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           ++ +IF T  W I+ N   G    P D++ VA+   +    ++  I+LP   PY  TG  
Sbjct: 170 AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPLEFFWKIMLPSAAPYIFTGLR 229

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G +W A I +E+   G       G+G +I ++       E++L +  +      L+R
Sbjct: 230 IGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGIIGFVLDR 283


>gi|320173466|gb|EFW48665.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella dysenteriae CDC 74-1112]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|296127455|ref|YP_003634707.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296019271|gb|ADG72508.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 242

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 14/160 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R+ +A ++S L  F++  L+     L  +L+PI++ +++IP +  +   V++F N  
Sbjct: 59  SIVRVFAAFILSFLSAFLFGVLSGIFLPLRYILMPIINFIRTIPTIPLILVAVIWFDN-- 116

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               I   +  IF I    + N        + N+ ++L E+S S+ +S   +   L +P+
Sbjct: 117 DTVPIFVSMLVIFPIIYDAITN-------GIINVDKNLIEMSLSYNVSLKNQIINLYIPY 169

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
             P ++  +  SM   W  ++A+E++      +P  GIGS
Sbjct: 170 IKPYVLTALSQSMGITWKSILAAEIL-----ALPSFGIGS 204


>gi|239813121|ref|YP_002942031.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799698|gb|ACS16765.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 263

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R++   ++AS+  + +G  IG  P + + +QP  + +   PA+   PL    +S + 
Sbjct: 73  TVGRMLQGWLLASLFGVLLGAAIGVSPAVRAWVQPTLEFIRPLPASALLPL---AISIFG 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           LNP + L  ++ FG  W +L   + G +A      EVA    ++   +   + LP   P 
Sbjct: 130 LNPGMVL-FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAFVWKMGLPNAMPD 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A       +I   VA  G +    +GLG  I  +       ++  G++++   
Sbjct: 189 ILAGMRLAL------TIALIVAVVGEMIASQSGLGQAILLAARAFRASDLFAGIVLLGLI 242

Query: 566 VLALNRFL 573
             A N  L
Sbjct: 243 GFASNALL 250



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 22/200 (11%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T  RML   +++ LF  +       S  +   + P L+ ++ +P    L   +  F
Sbjct: 69  FTQATVGRMLQGWLLASLFGVLLGAAIGVSPAVRAWVQPTLEFIRPLPASALLPLAISIF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L PG V+       F +    +W +  +       +   L EV+R  ++S     W +
Sbjct: 129 -GLNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAFVWKM 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240
           G+P +MP ++  M ++++      +A  + VVG+ +    G+G  I   A A +  D   
Sbjct: 181 GLPNAMPDILAGMRLALT------IALIVAVVGEMIASQSGLGQAILLAARAFRASD--- 231

Query: 241 ILYAMLTMLGVI-FLYDQLL 259
            L+A + +LG+I F  + LL
Sbjct: 232 -LFAGIVLLGLIGFASNALL 250


>gi|157159068|ref|YP_001463988.1| glycine betaine transporter membrane protein [Escherichia coli
           E24377A]
 gi|187731166|ref|YP_001881570.1| glycine betaine transporter membrane protein [Shigella boydii CDC
           3083-94]
 gi|191167100|ref|ZP_03028921.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B7A]
 gi|209920122|ref|YP_002294206.1| glycine betaine transporter membrane protein [Escherichia coli
           SE11]
 gi|218555226|ref|YP_002388139.1| glycine betaine transporter membrane protein [Escherichia coli
           IAI1]
 gi|218696275|ref|YP_002403942.1| glycine betaine transporter membrane protein [Escherichia coli
           55989]
 gi|260856789|ref|YP_003230680.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O26:H11 str. 11368]
 gi|293448996|ref|ZP_06663417.1| glycine betaine transporter membrane protein [Escherichia coli
           B088]
 gi|300815919|ref|ZP_07096143.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300916826|ref|ZP_07133530.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|309795137|ref|ZP_07689556.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331678656|ref|ZP_08379330.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H591]
 gi|157081098|gb|ABV20806.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E24377A]
 gi|187428158|gb|ACD07432.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella boydii CDC 3083-94]
 gi|190902882|gb|EDV62610.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B7A]
 gi|209913381|dbj|BAG78455.1| glycine/betaine/proline ABC transporter permease component
           [Escherichia coli SE11]
 gi|218353007|emb|CAU98825.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218361994|emb|CAQ99600.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257755438|dbj|BAI26940.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O26:H11 str. 11368]
 gi|291322086|gb|EFE61515.1| glycine betaine transporter membrane protein [Escherichia coli
           B088]
 gi|300415892|gb|EFJ99202.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300531848|gb|EFK52910.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|308121108|gb|EFO58370.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|320198430|gb|EFW73032.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli EC4100B]
 gi|323154889|gb|EFZ41081.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli EPECa14]
 gi|323183204|gb|EFZ68601.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1357]
 gi|323946350|gb|EGB42379.1| inner membrane transport system [Escherichia coli H120]
 gi|324020307|gb|EGB89526.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324120037|gb|EGC13914.1| inner membrane transport system [Escherichia coli E1167]
 gi|331073486|gb|EGI44807.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H591]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|156932792|ref|YP_001436708.1| glycine betaine transporter membrane protein [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156531046|gb|ABU75872.1| hypothetical protein ESA_00588 [Cronobacter sakazakii ATCC BAA-894]
          Length = 356

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 173 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVVRL 227

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E +RSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 228 TI---LGINQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 280

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 281 VVIASMIAVG-------GLGQMVLRGIGRLDM 305


>gi|332687053|ref|YP_004456827.1| glycine betaine ABC transporter permease OpuAB/ glycine betaine ABC
           transporter glycine betaine-binding protein OpuAC
           [Melissococcus plutonius ATCC 35311]
 gi|332371062|dbj|BAK22018.1| glycine betaine ABC transport system, permease protein OpuAB/
           glycine betaine ABC transport system, glycine
           betaine-binding protein OpuAC [Melissococcus plutonius
           ATCC 35311]
          Length = 293

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 26/182 (14%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P      TL ++S+  IS++       L AK  ++  ++ PILD MQ++P   +L   V 
Sbjct: 89  PDLMDTLTLVLVSSF-ISIVIGVPLGILMAKYNKVQTIITPILDFMQTMPGFVYLIPAVA 147

Query: 122 YFMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +F     G V G   + IFA+  T +  N+       +  +P++L E S SF  + WQK 
Sbjct: 148 FF---GIGIVPGVFASIIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTNWQKL 198

Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           + L +P +    M G+    M+++S          M+V+  ++I  PG+G  +  A++  
Sbjct: 199 FKLELPLAKSTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQRA 247

Query: 237 DL 238
            +
Sbjct: 248 QV 249


>gi|169796004|ref|YP_001713797.1| nitrate ABC transporter, membrane protein [Acinetobacter baumannii
           AYE]
 gi|213157262|ref|YP_002319307.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii AB0057]
 gi|215483461|ref|YP_002325678.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB307-0294]
 gi|301344714|ref|ZP_07225455.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB056]
 gi|301510320|ref|ZP_07235557.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB058]
 gi|301596302|ref|ZP_07241310.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB059]
 gi|169148931|emb|CAM86806.1| putative transport protein (ABC superfamily, membrane); putative
           nitrate ABC transporter, membrane [Acinetobacter
           baumannii AYE]
 gi|213056422|gb|ACJ41324.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii AB0057]
 gi|213986090|gb|ACJ56389.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB307-0294]
          Length = 284

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 43/239 (17%), Positives = 103/239 (43%), Gaps = 18/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F +        +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S     + + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           MI          GIG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|319794681|ref|YP_004156321.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus EPS]
 gi|315597144|gb|ADU38210.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus EPS]
          Length = 312

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 38/245 (15%)

Query: 318 RTLGVIRFH-------FPENFLQLCSNQRVSYMLDIFWFCVVCGVA----IGIAWQ---- 362
           R  GV R         FP+   +    QR    L  FW  V+  +A    + + W+    
Sbjct: 23  RGEGVPRIEAAPHPNPFPKG--EREQKQRTPIDLRAFWMRVLPPLAGFGLLLLIWELVAM 80

Query: 363 --SIGYIVNHFTYQDVLYVI---------------WLGCITMFRVVVLIIIASIIWIPVG 405
             + G+     T+Q  L V                W    ++ RV +   +A+++ IP G
Sbjct: 81  KSTTGFPTPLATWQQALTVFSDPFYSKGPNDQGVGWNVLSSLQRVALGFGLAALVGIPAG 140

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             IG    ++    P   L+       + P  +  + +   NP    ++ +   + W ++
Sbjct: 141 FAIGRFEFLARMFNPLISLMRPVSPLAWLP--IGLLVFKGANPAAIWTIFIC--SIWPMV 196

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G    P+D+  VA   +++ W+    I+ P + PY +TG   A G AW   + +E
Sbjct: 197 INTAVGVQRVPSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTGVRLAVGTAWLVIVAAE 256

Query: 526 VASWG 530
           + + G
Sbjct: 257 MLTGG 261



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +M+ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 155 PLISLMRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 206

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P D   V++   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 207 PSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 261


>gi|170738745|ref|YP_001767400.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168193019|gb|ACA14966.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 285

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A +  +P+G+ IG  P +   + P  Q+L   P   + PL    +  + L P      L
Sbjct: 103 LAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAWLPL---AMILFGLGPR-SACFL 158

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + IL N + G  +      E A+     G   +  ++LP   P   TG     G
Sbjct: 159 VFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSAQFTQVVLPAALPSIFTGLRLGLG 218

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   +V E+          TGLGA I E+ +      V+ G++++
Sbjct: 219 FAWVVIVVGEMTGV------PTGLGAMIMEARQLSRTEIVICGMVVI 259


>gi|167033283|ref|YP_001668514.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166859771|gb|ABY98178.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G   H+ +   P  Q L       + P+VV  +      P   +  L+ F   W
Sbjct: 81  PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 136

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N  AG       + +++ S   T W     +I+PG+  + +TG   A G  W   +
Sbjct: 137 PILLNTAAGVRQLDARWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLV 196

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYL 579
             E+         + GLG +I ++ ++ ++ E++  VL++    FVL AL R L H  ++
Sbjct: 197 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWV 249

Query: 580 YG 581
           +G
Sbjct: 250 HG 251


>gi|307314433|ref|ZP_07594038.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|306906001|gb|EFN36522.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|315061959|gb|ADT76286.1| glycine betaine transporter subunit [Escherichia coli W]
 gi|323377460|gb|ADX49728.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|196052748|gb|ACG69439.1| ABC transporter inner membrane subunit protein [Pseudomonas
           pseudoalcaligenes]
          Length = 280

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF--SMPG 191
           ++ +AIF IF   VW M  +    +  + RD   V+R+  LS  +  + + +P   +MP 
Sbjct: 148 SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRAMPT 207

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M +S+   W  +VA EM+V G       GIG Y+       +L ++++++L M+GV
Sbjct: 208 ILTGMRISVGIAWLVIVAPEMLVGGT------GIGYYVWNEWNNLNLASVIFSIL-MIGV 260

Query: 252 IFLYDQLLF 260
           + +   LL 
Sbjct: 261 VGMLLDLLL 269



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 14/191 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IPV   IG  P +   + PF Q+L       + PL +  +    
Sbjct: 90  SLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG--I 502
            +     ++ +IF  + W +L N   G +    D+  VA +  ++  R    +ILP    
Sbjct: 150 TS-----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRA 204

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TG   + G AW   +  E+   G      TG+G Y+       +   V+  +L++
Sbjct: 205 MPTILTGMRISVGIAWLVIVAPEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMI 258

Query: 563 CCFVLALNRFL 573
               + L+  L
Sbjct: 259 GVVGMLLDLLL 269


>gi|26990346|ref|NP_745771.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24985304|gb|AAN69235.1|AE016558_5 sulfonate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R+++ +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAVTTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +      P   +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581
           I ++ ++ ++ E++  VL++    FVL AL R L H  +++G
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251


>gi|325922412|ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
 gi|325547109|gb|EGD18194.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
          Length = 284

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 25/192 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + + +G+ +G    +   I P  Q L A P+  + PL++       
Sbjct: 80  SVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSLAWVPLLL------- 132

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       L+  G  + +   V++G         E+  S+ ++  R  R I+
Sbjct: 133 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 188

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E  S P++V+G
Sbjct: 189 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 241

Query: 559 VLIMCCFVLALN 570
            +++   +  L+
Sbjct: 242 AIVLLALLGKLS 253


>gi|260432661|ref|ZP_05786632.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416489|gb|EEX09748.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
          Length = 529

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-----WIPVGIWIGFRPHI 414
           AW++ G  V  FT   + Y+  LG   +    V ++ A+++      IP+GIW G     
Sbjct: 311 AWRAAGPRVAIFTAASLAYIALLGYWDVAMETVALVGAAVLLCVTFGIPLGIWFGKSKRA 370

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
               +P   L+   PA V+    +  ++++       +   +IFG    I    + G   
Sbjct: 371 YRAAEPVLDLMQTLPAFVYL---IPIIAFFGTGNPPGILATIIFGMPPVIRLTAL-GMRG 426

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            P   KE A +F  + W+  + + +P   P  +TG
Sbjct: 427 VPESIKEAAVAFGASKWQLLKDVEIPLALPSIMTG 461


>gi|148656880|ref|YP_001277085.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148568990|gb|ABQ91135.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  ++  +   L   +L ++ + T    LS   I+L  +     L A++R    VL P+L
Sbjct: 63  PTLVIQRLATELAGETLQRHITITLSAALSGFSIALALSLSLGYLLARTRTFDRVLTPLL 122

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q++PI+      V++       +V+ A L   F I ++     T   ++S   +PR+
Sbjct: 123 AASQAVPIVAVAPLIVLWVGVGLESRVLVATLVTFFPILSA-----TIVAFRS---VPRE 174

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +++R    + W    Y+  P ++PG+   +   ++      +A+   VVG+ +    G
Sbjct: 175 LIDMARISGANRWHLLRYVEAPLALPGIFGGVKAGLA------LATTGAVVGEFIGGRDG 228

Query: 225 IGSYIALA 232
           +G+ I +A
Sbjct: 229 LGALINIA 236


>gi|152969527|ref|YP_001334636.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238893997|ref|YP_002918731.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262040961|ref|ZP_06014183.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330013856|ref|ZP_08307813.1| putative aliphatic sulfonates transport permease protein SsuC
           [Klebsiella sp. MS 92-3]
 gi|150954376|gb|ABR76406.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238546313|dbj|BAH62664.1| putative aliphatic sulfonates transporter permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259041655|gb|EEW42704.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328533327|gb|EGF60074.1| putative aliphatic sulfonates transport permease protein SsuC
           [Klebsiella sp. MS 92-3]
          Length = 263

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      +   ++  SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISSWRALVGFAIGGSIGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + +  + NI R L E++RS+ LSG+  F +
Sbjct: 120 FGIDETAKIFLVSLGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFALFRH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPSVMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
               ILYA+L  L  +    QLL R  + W+  + L+   
Sbjct: 225 VVAIILYAILGKLADV--CAQLLERLWLRWNPAYHLQEAN 262



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +V   I   I + +G+  G        +    Q+L   P     PLV+    +
Sbjct: 63  AISSWRALVGFAIGGSIGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++    +  L+  GT + I  N   G         E+A S+ ++G+  +R++ILPG  
Sbjct: 120 FGIDETAKI-FLVSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV------- 556
           P  + G   A G  W   IV+E  S         G+G Y+A +  +    +VV       
Sbjct: 179 PSVMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 557 --LGVLIMCCFVLALNRFL-WHPLY 578
             LG L   C  L    +L W+P Y
Sbjct: 232 AILGKLADVCAQLLERLWLRWNPAY 256


>gi|260869357|ref|YP_003235759.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O111:H- str. 11128]
 gi|257765713|dbj|BAI37208.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O111:H- str. 11128]
 gi|323180099|gb|EFZ65651.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1180]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|218261441|ref|ZP_03476256.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224016|gb|EEC96666.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii
           DSM 18315]
          Length = 271

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+ +I+LL          ++ +   V+ P+LD+MQ++P   +L   V++F   
Sbjct: 87  QTVALVLSSTIIALLLGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFF--- 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P D+ E +RSF  +  Q  + + +P
Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPEDIVEATRSFGATSGQLLFKVQLP 198

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +MM++S     VV + MI  G
Sbjct: 199 LALPTIMAGVNQTIMMALS----MVVIAAMISAG 228



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           IIA ++ +P+GIW G     +  I+P   L+   PA V+    +  V ++ L P      
Sbjct: 97  IIALLLGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYL---IPAVLFFGLGPVPGAFA 153

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            +IF     +    + G    P D  E   SF  T  +    + LP   P  + G
Sbjct: 154 TVIFAMPPVVRLTDL-GIRQVPEDIVEATRSFGATSGQLLFKVQLPLALPTIMAG 207


>gi|308186280|ref|YP_003930411.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1]
 gi|308056790|gb|ADO08962.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1]
          Length = 263

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 23/221 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      +   +   S+    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI R L E++RS+ LSGW  F  
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDRGLVEMARSYGLSGWSLFIQ 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPNIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
               ILYA+L  L  +     LL R  + W   ++L+    
Sbjct: 225 VVAIILYALLGKLADVAAL--LLERVWLRWHPAYQLKEENA 263



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G+  G        +    Q+L   P     PLV+    +
Sbjct: 63  AISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S         G+G Y+A +  +    +VV+  +I+ 
Sbjct: 179 PNIMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 564 CFV--------LALNR--FLWHPLY 578
             +        L L R    WHP Y
Sbjct: 232 ALLGKLADVAALLLERVWLRWHPAY 256


>gi|302059728|ref|ZP_07251269.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
          Length = 282

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 16/170 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS   I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|291617213|ref|YP_003519955.1| NrtB [Pantoea ananatis LMG 20103]
 gi|291152243|gb|ADD76827.1| NrtB [Pantoea ananatis LMG 20103]
          Length = 312

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 158 PIIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMIINTAEGVQRI 209

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 210 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 264



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    ++    P   LL       + P  +  + +  
Sbjct: 124 SLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWLP--IGLLLFQR 181

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 182 AEPAS--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 239

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 240 VLTGVRLSIGIAWLVIVAAEMLTGG 264


>gi|323976150|gb|EGB71243.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRTQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIASI 252

Query: 564 CFVL-----ALNRFL--WH 575
            F+L     AL R L  WH
Sbjct: 253 AFLLELGLRALQRRLTPWH 271


>gi|323965317|gb|EGB60775.1| inner membrane transport system [Escherichia coli M863]
 gi|327254683|gb|EGE66299.1| taurine transport system permease protein tauC [Escherichia coli
           STEC_7v]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ +I A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALIAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|313498427|gb|ADR59793.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R++V +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +      P   +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581
           I ++ ++ ++ E++  VL++    FVL AL R L H  +++G
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251


>gi|307329018|ref|ZP_07608186.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306885380|gb|EFN16398.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 326

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 11/193 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA +I  P+G+ +     I + + P    L + P+  + P     V +  LN  +  ++
Sbjct: 135 LIALVIATPLGLIVARVKFIRAALGPILSGLQSLPSVAWVP---PAVIWLGLNDQMMYTV 191

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ G    I   ++AG    P  F     +    G    R+I+LP   P YV G     
Sbjct: 192 ILL-GAVPSIANGLVAGIDQVPPLFLRAGRTLGARGLVSARHILLPAALPGYVAGLKQGW 250

Query: 515 GGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +W + + +E +A    + L   GLG Y+           V+LG+L++    +A+   +
Sbjct: 251 AFSWRSLMAAEIIAKSPDLGL---GLGQYLENQRNNSDMAGVLLGILMILLVGIAIELLI 307

Query: 574 WHPLYLYGTRCLR 586
           + P+     R LR
Sbjct: 308 FAPIE---RRVLR 317


>gi|262043921|ref|ZP_06017009.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259038775|gb|EEW39958.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 230

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 47  ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 101

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 102 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 154

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 155 VVIASMIAVG-------GLGQIVLRGIGRLDM 179


>gi|150402039|ref|YP_001329333.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
 gi|150033069|gb|ABR65182.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
          Length = 277

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 18/191 (9%)

Query: 66  SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL ++ ++ +I+L+F   +  + A+S+ +  +L P+LD+MQ++P L +L   V++F 
Sbjct: 90  SMITLSLIITSTLIALIFGIPFGIVKARSKLVSTLLDPLLDVMQTLPSLAYLIPAVLFF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V G     IFA+    +   +  + Q    +  +L EV ++F  + WQ    + 
Sbjct: 149 --GIGEVPGVIATVIFAM-PPAIKLTSLGIEQ----VSEELIEVGKAFGGTSWQILTKIE 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L   L A
Sbjct: 202 LPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEA 254

Query: 245 --MLTMLGVIF 253
              +T L VIF
Sbjct: 255 GIAVTFLAVIF 265


>gi|323694649|ref|ZP_08108813.1| ABC transporter permease [Clostridium symbiosum WAL-14673]
 gi|323501289|gb|EGB17187.1| ABC transporter permease [Clostridium symbiosum WAL-14673]
          Length = 613

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 27/193 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+++VISLL       + + S R  +++ PILD MQ++P+  +L   V++F       V
Sbjct: 426 VLASVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 485

Query: 132 IGAELAAIFAI--FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           I   + AI  +   TS            +  +  ++ E +RSF  + WQ  + + +P ++
Sbjct: 486 IATTIYAIVPVIRLTS----------HGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQAL 535

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P    G+   +MM+M+           +VV  ++I   G+G  + +++   ++   L A 
Sbjct: 536 PTILTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLISVNRIEIGRGLLAG 584

Query: 246 LTMLGVIFLYDQL 258
             ++ V  L D+L
Sbjct: 585 TAVVIVAILMDRL 597


>gi|110681288|ref|YP_684295.1| nitrate ABC transporter, permease component [Roseobacter
           denitrificans OCh 114]
 gi|109457404|gb|ABG33609.1| nitrate ABC transporter, permease component [Roseobacter
           denitrificans OCh 114]
          Length = 357

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452
           +IASI+ IP+GI  G     ++ + P  Q+        + P+V   VS  +   + W   
Sbjct: 162 MIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221

Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                ++ +   + W  L N   G S+   D   V+    +  +     ++LP   P   
Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333

Query: 568 ALNRFL 573
            +  FL
Sbjct: 334 GIIGFL 339



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VSR  +++ + K   L +P ++P +   + +S+  GW 
Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+ T+  + FL D++++  
Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347

Query: 261 RPMIVWSNK 269
           + M  +SN 
Sbjct: 348 QSMFTFSNN 356


>gi|21623830|dbj|BAC00966.1| ABC-type transporter membrane permease component [Pseudomonas
           putida]
          Length = 279

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 87  SLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  + L  L IF     I      G           A S   T  +  R++ILP   P 
Sbjct: 147 LS-KVLLIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256

Query: 566 VLALN 570
             AL 
Sbjct: 257 AFALE 261


>gi|296132128|ref|YP_003639375.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296030706|gb|ADG81474.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 277

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 12/189 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++RV +  ++A++I IP+GI  G      + IQP  + +   PA  F PLV+      
Sbjct: 84  ISVYRVTMGFLLAAVIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLVMVWAGIG 143

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L+IF GT + ++  V       P D    + +   T ++    +++P + 
Sbjct: 144 E-----GAKILVIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRVLIPAMM 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   +V+E+ +        +GLG  I ++        + +G+L++ 
Sbjct: 199 PNLMDTLRLMIGWAWTYLVVAELVA------ANSGLGYSILKAQRFLKTDVIFVGILVIG 252

Query: 564 CFVLALNRF 572
              L  +R 
Sbjct: 253 ILGLLTDRL 261


>gi|251795736|ref|YP_003010467.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247543362|gb|ACT00381.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 272

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 106/279 (37%), Gaps = 38/279 (13%)

Query: 311 NNVKKLCRTLGV--IRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVA----------- 356
            NVK + R L    I+ +   N  +L     V  +L + W F  + G A           
Sbjct: 2   ENVKAVPRPLQSRRIKLNVSLNIRKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDV 61

Query: 357 IGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           I   W  I  G + +HF              +M R +    +A +I IP+G+ IG+ P  
Sbjct: 62  IQALWNLILSGELFHHF------------AASMIRSLSGFALALVIAIPLGLAIGWYPLA 109

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  +L     A    P+ +  +     +       +++F   W IL N IA    
Sbjct: 110 RELLNPVMELFRNTAALALLPVFMLILGIGETSK----IAIVLFACTWPILLNTIAAVGN 165

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 + A S +++ ++ +  +ILP   P   TG   A  GA    I +E+        
Sbjct: 166 VDPLLIKSARSMNLSSFKLFIKVILPASVPTIFTGIRMAGTGAILVLIAAEMVG------ 219

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              GLG  I  S      PE+  G+L +    L +N+ L
Sbjct: 220 AKEGLGYLITYSQYNFQIPEMFAGILTIALLGLLINQGL 258


>gi|94501158|ref|ZP_01307681.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94426734|gb|EAT11719.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 332

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 15/205 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V    ++A  I IP+GI  G    +++ + P  Q+        + P+V   VS  +
Sbjct: 127 SLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVY 186

Query: 446 LNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ + W        ++ +     W  L N   G +    D   V+    +  +   R ++
Sbjct: 187 VSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISEDLINVSKVLRLNWFTKVRKVV 246

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS     LG
Sbjct: 247 LPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDS--LG 298

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
            +++    +    F+   L L   R
Sbjct: 299 RIMVAVITIGFIGFILDSLMLMLQR 323



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 12/174 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV---WN 149
           S+ L   L PI+ I + +  L +L    +    +Y       E + + +  T  +   W 
Sbjct: 152 SKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVYVSDDPWFEKSFVTSAITVTLCCLWP 211

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    + NI  DL  VS+  RL+ + K   + +P ++P +   M +S+  GW  ++A
Sbjct: 212 TLINTAVGVANISEDLINVSKVLRLNWFTKVRKVVLPSALPMMFTGMRLSLGVGWMVLIA 271

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           +EM+         PG+G ++    +      L  I+ A++T+  + F+ D L+ 
Sbjct: 272 AEMLAQN------PGLGKFVWDEFQNGSSDSLGRIMVAVITIGFIGFILDSLML 319


>gi|323487142|ref|ZP_08092449.1| ABC transporter permease [Clostridium symbiosum WAL-14163]
 gi|323399545|gb|EGA91936.1| ABC transporter permease [Clostridium symbiosum WAL-14163]
          Length = 625

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 27/193 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+++VISLL       + + S R  +++ PILD MQ++P+  +L   V++F       V
Sbjct: 438 VLASVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 497

Query: 132 IGAELAAIFAI--FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           I   + AI  +   TS            +  +  ++ E +RSF  + WQ  + + +P ++
Sbjct: 498 IATTIYAIVPVIRLTS----------HGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQAL 547

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P    G+   +MM+M+           +VV  ++I   G+G  + +++   ++   L A 
Sbjct: 548 PTILTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLISVNRIEIGRGLLAG 596

Query: 246 LTMLGVIFLYDQL 258
             ++ V  L D+L
Sbjct: 597 TAVVIVAILMDRL 609


>gi|227818731|ref|YP_002822702.1| ABC-type proline/glycine betaine transport system, permease
           component [Sinorhizobium fredii NGR234]
 gi|36958984|gb|AAQ87409.1| Glycine betaine transport system permease protein [Sinorhizobium
           fredii NGR234]
 gi|227337730|gb|ACP21949.1| predicted ABC-type proline/glycine betaine transport system,
           permease component [Sinorhizobium fredii NGR234]
          Length = 295

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 17/169 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVWN 149
           ++S R+   L PILD+MQ++P   +L   V   M L  GKV G     I+AI    ++ N
Sbjct: 126 SRSDRVQNALNPILDVMQTMPSFVYLIPVV---MLLGIGKVPGLIAVIIYAIPPMIRLTN 182

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +      + +D+ E + +F  S WQK   + +P ++P L+  +  ++      ++A
Sbjct: 183 LGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTLMAGINQTI------MMA 230

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             M+V+  ++I + G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 231 LAMVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278


>gi|311278367|ref|YP_003940598.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308747562|gb|ADO47314.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|220904097|ref|YP_002479409.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868396|gb|ACL48731.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 280

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 12/134 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +LSA ++S+L       LAA S     +++P+LD+MQ++P   +L   + +F     GKV
Sbjct: 96  VLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVMQTMPAFVYLIPAIPFFGI---GKV 152

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
                  IF++  +    + F+    +  +PRDL E + +F  +  Q+ + L +P +MP 
Sbjct: 153 SAVVATVIFSVPPA----IRFTCL-GIQQVPRDLVECTEAFGATRMQRLYKLELPLAMPT 207

Query: 191 ---GLVWNMMMSMS 201
              G+   +M+++S
Sbjct: 208 IVAGVNQTIMLALS 221


>gi|158520230|ref|YP_001528100.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
 gi|158509056|gb|ABW66023.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
          Length = 252

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++     S+  I VG  +G+R  I   + P   L    PA  + PL++  +    
Sbjct: 62  SLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPLLMLWIGINE 121

Query: 446 LNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + P     + +IF   ++ +L+N + G      D+  VA +   +  R    ++LP   P
Sbjct: 122 MLP-----ITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGRILFAVVLPLALP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI--AESTEKGSFPEVVLGVLIM 562
              TG     G AW   I +E+ +        TG+GA +  AES  +     V L VL +
Sbjct: 177 NIFTGLRLEAGMAWRTVIAAEMVA------IPTGIGALLMRAESLMRIDIIIVCLIVLAV 230

Query: 563 CCFVLALNRFLWHPLYLYG 581
            C V   N F W    L G
Sbjct: 231 MCLVFE-NLFAWLERRLTG 248


>gi|157147033|ref|YP_001454352.1| taurine transporter subunit [Citrobacter koseri ATCC BAA-895]
 gi|157084238|gb|ABV13916.1| hypothetical protein CKO_02810 [Citrobacter koseri ATCC BAA-895]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ ++ A II IPVGI +G  P I   + P  +L    P   + PL+V       
Sbjct: 83  SLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S      +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252

Query: 564 CFVL-----ALNRFL--WH 575
            F+L     AL R L  WH
Sbjct: 253 AFILELGLRALQRRLTPWH 271


>gi|313123818|ref|YP_004034077.1| ABC proline/glycine betaine transporter, permease and substrate
           binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280381|gb|ADQ61100.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 506

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A S+R G V+  I  I+Q+IP L  L         L P   IG    A+ A+    + 
Sbjct: 43  LLAHSKRAGEVVFQIASIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y +L NI  +LEE + +F LS W+K   L  P ++P ++  + +S+      ++
Sbjct: 95  PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALPIILSGVSISL----VMII 150

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +  +     +I   G+G+YI + I++ +
Sbjct: 151 GTATLAA---MIGAGGLGTYIMIGIQQNN 176


>gi|289522180|ref|ZP_06439034.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504016|gb|EFD25180.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 282

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 15/188 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I+P+ +    L   A  +   +L+A++ISLL       L A+     +V+ PILD MQ++
Sbjct: 78  ILPLLIGAFGLWALAMESLAVVLTAVIISLLIGIPMGILMAEINSFAVVIRPILDGMQTM 137

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P   +L   ++ F     GKV      A+ A     +  +       L ++P+++EE + 
Sbjct: 138 PSFVYLIPAMMLF---GLGKV-----PAVLATLIYSLPPVIRLTNMGLRHVPKNIEEAAL 189

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           ++  + WQ    + +P +MP ++  +  +       VV + MI          G+G  + 
Sbjct: 190 AYGATKWQLLKEVRIPLAMPSILTGVNQTTMMALAMVVVASMIGAR-------GLGQEVL 242

Query: 231 LAIKEQDL 238
           L+I   D+
Sbjct: 243 LSINRIDI 250


>gi|261340960|ref|ZP_05968818.1| taurine uptake ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316821|gb|EFC55759.1| taurine uptake ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++V ++ A +I +PVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLARILVALLAAVLIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VALSALAGVKSAQQVRIRAAQSLGASRVQVLLFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMMQSAGE 235


>gi|209546966|ref|YP_002278884.1| amino acid ABC transporter permease [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538210|gb|ACI58144.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 295

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    ++S+        L A+S RL  V+ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTILSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV G     I+AI       M       +  + +D+ E + +F  S  QK + + +P
Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSRSQKLFKVQLP 213

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  L
Sbjct: 214 LALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266

Query: 247 TMLGVIFLYDQL 258
            ++G+  ++D++
Sbjct: 267 AIVGIAIIFDRV 278


>gi|300869325|ref|ZP_07113916.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
 gi|300332702|emb|CBN59114.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
          Length = 283

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV V    AS+  IP+G+ +G  P I + ++P   L+   PA  F PL++  +    
Sbjct: 91  SLWRVGVGFFFASLFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLGIGE 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + L  + +F     ++ + +   S    D  E         W    ++I+P + P 
Sbjct: 151 -EPKITLIFIGVFFFNSLMVMDTVKFVS---KDLIEATYMLGGNRWETLTHVIVPHVLPG 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +  +      AW   IVSE+ +       T GLG  I+ +       E+ +G++++   
Sbjct: 207 IIDASRINFAAAWQLVIVSELIA------ATEGLGRRISVAGRFLKTDEIFVGLIVIGVI 260

Query: 566 VLALN 570
            L  +
Sbjct: 261 GLTFD 265



 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 21/198 (10%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           LF+     +      +  +L PI  +M+ +P   F+   ++Y         IG E   I 
Sbjct: 104 LFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLG-------IGEE-PKIT 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    +  +  +  ++  + +DL E +     + W+   ++ VP  +PG++    ++ 
Sbjct: 156 LIFIGVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTHVIVPHVLPGIIDASRINF 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQ 257
           +  W  V+ SE+I   +      G+G  I++A   +K  +    ++  L ++GVI L   
Sbjct: 216 AAAWQLVIVSELIAATE------GLGRRISVAGRFLKTDE----IFVGLIVIGVIGLTFD 265

Query: 258 LLFRPMIVWSNKFRLERT 275
           LLF+ M+  S K+  ++ 
Sbjct: 266 LLFQYMLQVSCKWASQKK 283


>gi|293396744|ref|ZP_06641020.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
 gi|291421008|gb|EFE94261.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
          Length = 264

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 19/179 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI R
Sbjct: 101 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG++ F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFALGFMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLERTTGI 278
           GIG Y+A+  +E    D++ +   +  +LG +  L  QLL R  + W   ++L+    +
Sbjct: 207 GIG-YLAMNAREFLQTDIVVVAIVLYAVLGKLADLSAQLLERVWLRWHPAYQLKHGEAL 264



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+R +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    ++V+  +++   +  L     
Sbjct: 190 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDIVVVAIVLYAVLGKLADLSA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERVWLRWHPAY 256


>gi|283786767|ref|YP_003366632.1| glycine betaine/L-proline ABC transporter permease [Citrobacter
           rodentium ICC168]
 gi|282950221|emb|CBG89857.1| glycine betaine/L-proline ABC transporter, permease protein
           [Citrobacter rodentium ICC168]
          Length = 353

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 170 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 224

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 225 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 277

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 278 VVIASMIAVG-------GLGQMVLRGIGRLDM 302


>gi|301159375|emb|CBW18893.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|323131166|gb|ADX18596.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|300812812|ref|ZP_07093207.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496148|gb|EFK31275.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 506

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A S+R G V+  I  I+Q+IP L  L         L P   IG    A+ A+    + 
Sbjct: 43  LLAHSKRAGEVVFQITSIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y +L NI  +LEE + +F LS W+K   L  P ++P ++  + +S+      ++
Sbjct: 95  PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISL----VMII 150

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +  +     +I   G+G+YI + I++ +
Sbjct: 151 GTATLAA---MIGAGGLGTYIMIGIQQNN 176


>gi|257870168|ref|ZP_05649821.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum
           EG2]
 gi|257804332|gb|EEV33154.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum
           EG2]
          Length = 575

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TL +LS++V S++       L AKS +   ++ PILD MQ++P   +L   V +F     
Sbjct: 99  TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154

Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G   + IFA+  T ++ N+       +  I R+L E S SF  +GWQK   L +P 
Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLVKLELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +    + G+    M+++S          M+V+  ++I  PG+G  +  A++
Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|261342126|ref|ZP_05969984.1| glycine betaine/L-proline transport system permease protein ProW
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315457|gb|EFC54395.1| glycine betaine/L-proline transport system permease protein ProW
           [Enterobacter cancerogenus ATCC 35316]
          Length = 356

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|209517263|ref|ZP_03266107.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502272|gb|EEA02284.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 311

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 66  SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123
           + TTL ++ +A++   L       L A+S R+ MV+ P+LD+MQ+ P   +L   V+ F 
Sbjct: 93  AMTTLSLIATAILFCALLGIPIGVLCARSPRVWMVVQPVLDMMQTTPTFVYLVPVVMLFG 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +   PG+V         A+ T+ +  +    +  +  +  ++ E  ++F    WQ  W +
Sbjct: 153 VGTVPGEV---------AVVTAAMPPLIRFTHLGIKMVETEIVEAGKAFGADKWQLLWEV 203

Query: 184 GVPFSMP 190
            +P +MP
Sbjct: 204 QLPLAMP 210


>gi|296132982|ref|YP_003640229.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296031560|gb|ADG82328.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 252

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 16/194 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129
           R+L +  I+++       L  K + +   +  ++  +QSIP + +L   +++F MN    
Sbjct: 61  RLLISYAIAVVIGVAVGILMGKYKVIDETVGSLIVGLQSIPSVVWLPLALLWFGMN---- 116

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF       W M  +    + ++P  +   +R+    G + FW++ +P ++
Sbjct: 117 -----EKAIIFITSLGGTWTMIVNTDTGVKSVPPIILRAARTMGAKGTKLFWHVVIPAAV 171

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  M ++ +  W  ++A E++  G       G+G  + +     D+  I+  M+ + 
Sbjct: 172 PSIITGMRLAWAFAWRALMAGELLSSGT------GLGQILMMGRNLSDMSQIVAVMIIIG 225

Query: 250 GVIFLYDQLLFRPM 263
            +  L D L+F+ +
Sbjct: 226 MIGCLVDNLMFKKV 239



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D  +V+ + C ++ R+++   IA +I + VGI +G    I   +      L + P+ V
Sbjct: 46  FVDNSFVLAITC-SLQRLLISYAIAVVIGVAVGILMGKYKVIDETVGSLIVGLQSIPSVV 104

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL    + ++ +N    + +  + GT W ++ N   G  + P      A +    G +
Sbjct: 105 WLPL---ALLWFGMNEKAIIFITSLGGT-WTMIVNTDTGVKSVPPIILRAARTMGAKGTK 160

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            + ++++P   P  +TG   A   AW A +  E+ S G      TGLG  +         
Sbjct: 161 LFWHVVIPAAVPSIITGMRLAWAFAWRALMAGELLSSG------TGLGQILMMGRNLSDM 214

Query: 553 PEVV 556
            ++V
Sbjct: 215 SQIV 218


>gi|295097267|emb|CBK86357.1| ABC-type proline/glycine betaine transport system, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|291616929|ref|YP_003519671.1| SsuD [Pantoea ananatis LMG 20103]
 gi|291151959|gb|ADD76543.1| SsuD [Pantoea ananatis LMG 20103]
          Length = 649

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 24/189 (12%)

Query: 95  RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   L +++++P L  +   +++F      K+    L  +F I+         +
Sbjct: 477 RLGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LN 528

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  + N+ R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        +
Sbjct: 529 TYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWL------TL 582

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +V +T+    GIG Y+A+  +E    D++    ILYA+L  L  +     LL R  + W 
Sbjct: 583 IVAETISANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSAL--LLERVWLRWH 639

Query: 268 NKFRLERTT 276
             ++ +  T
Sbjct: 640 PAYQRQEKT 648



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  P  + G   A 
Sbjct: 516 LVALGTLFPIYLNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFAL 575

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566
           G  W   IV+E  S         G+G Y+A +  +    +VV+  +I+   +        
Sbjct: 576 GLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSA 628

Query: 567 LALNR--FLWHPLY 578
           L L R    WHP Y
Sbjct: 629 LLLERVWLRWHPAY 642


>gi|62181314|ref|YP_217731.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|168244607|ref|ZP_02669539.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168822875|ref|ZP_02834875.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194449937|ref|YP_002046773.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197247835|ref|YP_002147710.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204929493|ref|ZP_03220567.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|224584594|ref|YP_002638392.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238909581|ref|ZP_04653418.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|62128947|gb|AAX66650.1| ABC superfamily (membrane), glycine/betaine/proline transport
           protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194408241|gb|ACF68460.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|197211538|gb|ACH48935.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204321212|gb|EDZ06412.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205336554|gb|EDZ23318.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205340771|gb|EDZ27535.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|224469121|gb|ACN46951.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|320087216|emb|CBY96982.1| Glycine betaine/L-proline transport system permease protein proW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|322614366|gb|EFY11297.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322621569|gb|EFY18422.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624430|gb|EFY21263.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626628|gb|EFY23433.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633512|gb|EFY30254.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322638445|gb|EFY35143.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322639748|gb|EFY36432.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322643794|gb|EFY40344.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649480|gb|EFY45914.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655930|gb|EFY52230.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661325|gb|EFY57550.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322662523|gb|EFY58731.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666897|gb|EFY63072.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671267|gb|EFY67390.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322677726|gb|EFY73789.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681447|gb|EFY77477.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322683846|gb|EFY79856.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715800|gb|EFZ07371.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323193765|gb|EFZ78968.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197447|gb|EFZ82584.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203262|gb|EFZ88291.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323205208|gb|EFZ90183.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323212779|gb|EFZ97590.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218079|gb|EGA02791.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221658|gb|EGA06071.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225126|gb|EGA09377.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230842|gb|EGA14960.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323234807|gb|EGA18893.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238846|gb|EGA22896.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323241546|gb|EGA25577.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248307|gb|EGA32243.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252927|gb|EGA36761.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323256951|gb|EGA40660.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323260574|gb|EGA44185.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264368|gb|EGA47874.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269502|gb|EGA52955.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|119386564|ref|YP_917619.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377159|gb|ABL71923.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 293

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 27/178 (15%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R ++ + +  L   V       L A+S R+  ++ PILD+MQ++P   +L   V+ 
Sbjct: 97  EDTMRTIAMVAVCTLIAVVLGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMI 156

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     GKV G     I+AI    V  +T      +  +  D+ E + +F  S WQK   
Sbjct: 157 F---GLGKVPGLIAVVIYAI--PPVIRLT---NLGIRQVAPDVLEAAEAFGSSSWQKLRD 208

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           + +P ++P    G+   +MMS++          M+VV  ++I + G+G  +  AI +Q
Sbjct: 209 VQLPLALPTIMAGINQTIMMSLA----------MVVVA-SMIGVRGLGQPVLQAINQQ 255


>gi|282897425|ref|ZP_06305427.1| Integral membrane components of other binding- protein-dependent
           transport system [Raphidiopsis brookii D9]
 gi|281198077|gb|EFA72971.1| Integral membrane components of other binding- protein-dependent
           transport system [Raphidiopsis brookii D9]
          Length = 263

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A++I IP+G+ +G  P + +  +P   +    PA  F PL+   + Y+ 
Sbjct: 73  SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALFEPAISIFRYMPAPAFIPLL---ILYFG 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     + LL+  GT   + FN +    A     +E+  + +  G +    IIL  I P+
Sbjct: 130 LGETPKI-LLIFIGT---VFFNTLMIMDAVKFVSRELIETSYTLGGK-NHQIILQVILPF 184

Query: 506 YVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            V   I AC      +WN  IV+E+ +       T GLG  I+ +       E+  G+++
Sbjct: 185 IVPNIIDACRVNMAASWNLVIVAELVA------ATEGLGRRISVAQRFLKTDEIFAGLIV 238

Query: 562 M 562
           +
Sbjct: 239 I 239


>gi|237730337|ref|ZP_04560818.1| taurine transporter subunit [Citrobacter sp. 30_2]
 gi|226905876|gb|EEH91794.1| taurine transporter subunit [Citrobacter sp. 30_2]
          Length = 276

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A ++ +PVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 84  SLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 144 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRVRAAQSLGASRAQVLWFVILPGALPE 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 200 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 253

Query: 564 CFVL-----ALNRFL--WH 575
            F+L     AL R L  WH
Sbjct: 254 AFILELGLRALQRRLTPWH 272



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ ++L           S  +  +L PI+++ + +P L +L   V++
Sbjct: 79  QHLAASLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIW 138

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     ++S   S  Q  W+
Sbjct: 139 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASRAQVLWF 190

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 191 VILPGALPEILTGLRIGLGVGWSTLVAAELI 221


>gi|218693829|ref|YP_002401496.1| taurine transporter subunit [Escherichia coli 55989]
 gi|218350561|emb|CAU96249.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli 55989]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|209885998|ref|YP_002289855.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209874194|gb|ACI93990.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 283

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 11/200 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V +  A +I +P+G+ +G    ++    P  Q L       + P+ V      
Sbjct: 92  VSLRRVLVGLGFALLIGVPLGLAVGSYARLNIATSPAFQFLRMISPLSWMPIAVMVFGVG 151

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             NP   +  ++ F   W IL N   G       +  +A S   T W    ++ILPG+  
Sbjct: 152 D-NP---IYFMLAFAAVWPILLNTAEGVRRLQPSWLSLADSLAATRWETLWHVILPGVLG 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +TG   A G  W   +  E+         + GLG +I ++ ++ ++ E++  VL++  
Sbjct: 208 HVLTGLRLAIGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMIGI 261

Query: 565 FVLALNRFLWHPLYLYGTRC 584
               L+      LY   TR 
Sbjct: 262 LGFMLDAGA-RALYQAATRS 280


>gi|56414768|ref|YP_151843.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363696|ref|YP_002143333.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56129025|gb|AAV78531.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197095173|emb|CAR60723.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|261868165|ref|YP_003256087.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|293391893|ref|ZP_06636227.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|261413497|gb|ACX82868.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|290952427|gb|EFE02546.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 503

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LSA++I+++     A L ++ R +  +++   +++Q+IP L  L   + +     P  +I
Sbjct: 24  LSALLIAVVIAVPIAVLLSRKRHMAEIVLQFTNVLQTIPSLALLGLLIPFVGIGSPPVLI 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+  IF         + Y  L  I + +++   +F LS WQ  W + +P ++P +
Sbjct: 84  ALTLYALLPIFQ--------NTYLGLSQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAM 135

Query: 193 V 193
           +
Sbjct: 136 M 136


>gi|333010800|gb|EGK30226.1| taurine transport system permease protein tauC [Shigella flexneri
           K-272]
 gi|333021298|gb|EGK40551.1| taurine transport system permease protein tauC [Shigella flexneri
           K-227]
          Length = 205

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 19  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 78

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 79  TS-KILLIYLAIFAP---VAMSPLAGVKSAQQVRIRAAQSLGASRAKVLWFVILPGALPE 134

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 135 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 171


>gi|327393668|dbj|BAK11090.1| nitrate transport permease protein NrtB [Pantoea ananatis AJ13355]
          Length = 312

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 158 PIIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMIINTAEGVQRI 209

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 210 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 264



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    ++    P   LL       + P  +  + +  
Sbjct: 124 SLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWLP--IGLLLFQR 181

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 182 AEPAS--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 239

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 240 VLTGVRLSIGIAWLVIVAAEMLTGG 264


>gi|325686152|gb|EGD28203.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 506

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A S+R G V+  I  I+Q+IP L  L         L P   IG    A+ A+    + 
Sbjct: 43  LLAHSKRAGEVVFQITSIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y +L NI  +LEE + +F LS W+K   L  P ++P ++  + +S+      ++
Sbjct: 95  PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISL----VMII 150

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +  +     +I   G+G+YI + I++ +
Sbjct: 151 GTATLAA---MIGAGGLGTYIIIGIQQNN 176


>gi|92112317|ref|YP_572245.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91795407|gb|ABE57546.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 253

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 22/160 (13%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +++ IP L ++ F +++F           E AA F I     W   F+ Y ++  I    
Sbjct: 102 LLRPIPPLAWIPFAIIWFGV--------TETAAAFIISIGVFWINYFTSYSAVRAIDDGY 153

Query: 166 EEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            EV+R+F   G+  +   + +P + PG++  +   +  GW  VVA+E+  +       PG
Sbjct: 154 YEVARAFGQGGFGARLAKISLPAAAPGILGGLRAGLGQGWMTVVAAELFGI-------PG 206

Query: 225 IGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYDQLLFR 261
           IG  +   ++   LLA   ++  MLT+  +  L+D L  R
Sbjct: 207 IGQRM---MEASGLLATDVVVVYMLTIAALYALFDFLFMR 243


>gi|219669918|ref|YP_002460353.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219540178|gb|ACL21917.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 255

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 22/249 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMV 77
           + LL+F++VI +  +L        VP     +  I   + S   YA    T  R+L+ + 
Sbjct: 13  YKLLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIYRILTSPDLYAMIPLTAGRLLAGLS 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + +    V   L     ++  VL P++ IMQ++P + ++   +V+F   + GK       
Sbjct: 73  LGVSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFG--FNGK------P 124

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F +  S +  +T ++      I ++L E++  +R S  ++  ++ +P  +P       
Sbjct: 125 AVFIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQ 184

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA--ILYAMLTMLGVI 252
           +++  GW   V +E++   D      GIG  I L    ++ + ++A  IL  +L  L   
Sbjct: 185 IALGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLS-D 237

Query: 253 FLYDQLLFR 261
           FL  + LFR
Sbjct: 238 FLIGKFLFR 246



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I  T   I  NV AG      +  E+AS +  +  +  R++ILP I PY+ +    A 
Sbjct: 128 IVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIAL 187

Query: 515 GGAWNASIVSEV 526
           G  W  ++++EV
Sbjct: 188 GSGWKIAVMAEV 199


>gi|227508241|ref|ZP_03938290.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227192470|gb|EEI72537.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 340

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II ++I + +G+++G     +    PF +++   PA  + PL +      ++        
Sbjct: 157 IIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSYMAE----IF 212

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   + + F  I G  +   D+ E A +   + ++  R +++PG  P    G  TA 
Sbjct: 213 LIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPNIFIGIFTAM 272

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           G ++   ++SE+           GLG YI  +   G++ +V   ++IM      +  FL 
Sbjct: 273 GLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVLFSVIFSFL- 325

Query: 575 HPLYLYGTR 583
           + L  Y  R
Sbjct: 326 NKLQEYALR 334


>gi|16761591|ref|NP_457208.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29143071|ref|NP_806413.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|168233771|ref|ZP_02658829.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168238725|ref|ZP_02663783.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194444232|ref|YP_002042055.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472631|ref|ZP_03078615.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194733925|ref|YP_002115766.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|213163680|ref|ZP_03349390.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213424577|ref|ZP_03357366.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213581947|ref|ZP_03363773.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213618844|ref|ZP_03372670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213650061|ref|ZP_03380114.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213859649|ref|ZP_03385353.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|289824479|ref|ZP_06544055.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25306099|pir||AB0842 glycine betaine/L-proline transport system permease protein P
           STY2936 [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16503892|emb|CAD05921.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138704|gb|AAO70273.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|194402895|gb|ACF63117.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194458995|gb|EDX47834.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194709427|gb|ACF88648.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197288523|gb|EDY27900.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205332211|gb|EDZ18975.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|16766121|ref|NP_461736.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|167992531|ref|ZP_02573629.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168262082|ref|ZP_02684055.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168464070|ref|ZP_02697987.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197264631|ref|ZP_03164705.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198245962|ref|YP_002216786.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200386810|ref|ZP_03213422.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205353760|ref|YP_002227561.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858079|ref|YP_002244730.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|20141693|sp|P17327|PROW_SALTY RecName: Full=Glycine betaine/L-proline transport system permease
           protein proW
 gi|16421359|gb|AAL21695.1| glycine/betaine/proline transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|195633315|gb|EDX51729.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197242886|gb|EDY25506.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197940478|gb|ACH77811.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603908|gb|EDZ02453.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205273541|emb|CAR38527.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205329315|gb|EDZ16079.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205349121|gb|EDZ35752.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206709882|emb|CAR34235.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|261247951|emb|CBG25784.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267994926|gb|ACY89811.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|312913833|dbj|BAJ37807.1| glycine betaine ABC transporter permease protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223607|gb|EFX48672.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|326624544|gb|EGE30889.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628868|gb|EGE35211.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
 gi|332989687|gb|AEF08670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|312879364|ref|ZP_07739164.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
 gi|310782655|gb|EFQ23053.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
          Length = 274

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+     ++S++ +P+G+ +G RP +     P  + L   P     PL+   + ++ +  
Sbjct: 79  RIAAGFGLSSLVALPLGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPLL---ILWFGIGE 135

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              ++++++  T + +  N + G         EV  +  ++     R I+LP   P  +T
Sbjct: 136 GSKMAVILL-ATFFPVFLNTLEGVRRCDPGLLEVGRTLGLSEGEGVRRIVLPAALPSILT 194

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVL 567
           G     G +W + I +E+ +        +GLG Y+    E  S P+V++ GVL++     
Sbjct: 195 GLRLGLGYSWRSLIGAELIA------AASGLG-YLIHDAEALSRPDVIVAGVLVLGVIGA 247

Query: 568 ALN 570
           A +
Sbjct: 248 ATD 250


>gi|157148217|ref|YP_001455536.1| glycine betaine transporter membrane protein [Citrobacter koseri
           ATCC BAA-895]
 gi|157085422|gb|ABV15100.1| hypothetical protein CKO_04028 [Citrobacter koseri ATCC BAA-895]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|326692454|ref|ZP_08229459.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc argentinum KCTC 3773]
          Length = 568

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A VISL+       L AKS +   ++ PILD MQ++P   +L   V +F + + PG    
Sbjct: 102 ASVISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P  L E + SF  + WQK   L +P +    +
Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTIL 212

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADI 250


>gi|283835587|ref|ZP_06355328.1| glycine betaine/L-proline transport system permease protein ProW
           [Citrobacter youngae ATCC 29220]
 gi|291068798|gb|EFE06907.1| glycine betaine/L-proline transport system permease protein ProW
           [Citrobacter youngae ATCC 29220]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|209552027|ref|YP_002283943.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539620|gb|ACI59551.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 660

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 99/494 (20%), Positives = 195/494 (39%), Gaps = 72/494 (14%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +++IMQ++PI  +L  T++ F    P        AA+FA     +  M  +   +L ++P
Sbjct: 191 VMNIMQTVPIFSYLLPTLLLF-GYGPS-------AALFATVVYALPPMVHATVLALRSVP 242

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +  E++R    S  Q  W + +P +MP    GL   +MM+++     V+ + MI  G  
Sbjct: 243 SETLELARMTGCSRTQTLWKVELPVAMPQLAIGLNQVVMMTLN----MVIIASMIGAG-- 296

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
                G+G  +  A++  D  A   A + ++ +  + D+L        +      ++TG 
Sbjct: 297 -----GLGYDVLRALRRLDFGAGFEAGMGIVALAVVLDRL--------TQAAARNQSTGR 343

Query: 279 Y----PADS-WVLYLFRKTNFLRFI--GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
           +    P DS   L L      + F     ++W    P    +       G + F   + F
Sbjct: 344 HRLWRPRDSILALSLLVVPTVVSFAVPALAAW----PTGWTLTTAPFWNGAVSF-INQTF 398

Query: 332 LQLCSNQRVSYMLDIF-----------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                  R + +L +            W  VV  +A+  A+   G          +L+++
Sbjct: 399 YGPLEAMRTAMLLGVMNPFRDLLQSAPWSVVVLLLAM-TAYALGGLRTTAVVMLLILFIV 457

Query: 381 WLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             G       +++  V+ + IA  I +P+GIW+   P +   +Q     L   P  V+  
Sbjct: 458 VTGYWEAAMASVYLTVLSVAIALAIGLPLGIWVAGHPRLHGPVQLALDTLQTLPTLVYL- 516

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             +  V  +       L  +  +     + +  +AG +  P++  E       T W+ +R
Sbjct: 517 --LPAVMLFRNGDFSALIAIASYAIAPAVRYG-MAGMAHVPHERIEAGLMSGCTPWQTFR 573

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG-SFPE 554
           +I LP   P  + G       A +  +++ +         T  LG  +  +  +G + P 
Sbjct: 574 FISLPSALPTLILGVNQTVMMALSMLVIAALVG-------TRELGQEVYTALARGQTGPG 626

Query: 555 VVLGVLIMCCFVLA 568
           ++ G+ + C  ++A
Sbjct: 627 IIAGLCVACIALIA 640


>gi|161615705|ref|YP_001589670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161365069|gb|ABX68837.1| hypothetical protein SPAB_03490 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|237729637|ref|ZP_04560118.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2]
 gi|226908243|gb|EEH94161.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|225869714|ref|YP_002745661.1| glycine-betaine binding permease protein [Streptococcus equi subsp.
           equi 4047]
 gi|225699118|emb|CAW92301.1| putative glycine-betaine binding permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 576

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK++ +  V+ P+LD+MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLLGIPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA+  T +  N+      +L +IP +L E S +F  +  QK   + +P +   
Sbjct: 159 GVFASVIFALPPTVRFTNL------ALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHT 212

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 213 MMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|167552691|ref|ZP_02346443.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205322669|gb|EDZ10508.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|161502140|ref|YP_001569252.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863487|gb|ABX20110.1| hypothetical protein SARI_00163 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|255349261|ref|ZP_05381268.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 70]
 gi|255503797|ref|ZP_05382187.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 70s]
 gi|255507479|ref|ZP_05383118.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D(s)2923]
 gi|289525901|emb|CBJ15383.1| ABC transporter permease [Chlamydia trachomatis Sweden2]
 gi|296435488|gb|ADH17666.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis E/150]
 gi|296439205|gb|ADH21358.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis E/11023]
          Length = 589

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILIVESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|281178065|dbj|BAI54395.1| sulfonate ABC transporter permease component [Escherichia coli
           SE15]
          Length = 264

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 ELVEMARSYGLSGMPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|22537935|ref|NP_688786.1| amino acid ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|76798898|ref|ZP_00781104.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22534834|gb|AAN00659.1|AE014273_6 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76585744|gb|EAO62296.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 575

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS ++  V+ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + +FA+  T +  N+      ++  IP +L E S SF  +  QK + + +P +  
Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTVKQKLFKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|217324236|ref|ZP_03440320.1| taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. TW14588]
 gi|217320457|gb|EEC28881.1| taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. TW14588]
          Length = 224

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 30  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 89

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 90  GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 145

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 146 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 184


>gi|147676909|ref|YP_001211124.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pelotomaculum thermopropionicum SI]
 gi|146273006|dbj|BAF58755.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pelotomaculum thermopropionicum SI]
          Length = 217

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 18/145 (12%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV+   + A +I +P+G  +G+   + + + P    +   P   + PL +      
Sbjct: 84  ITLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTI------ 137

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                +W  L       L+ F   + ++ N IAG    P D+   A S     W  +  +
Sbjct: 138 -----VWFGLGDGPTVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNV 192

Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522
           I+PG  P  +TG   A G  W + I
Sbjct: 193 IVPGSLPDILTGGRIAVGLGWMSVI 217



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L+  + +L+       L   S+ +  +L P++D ++ +PI+ ++  T+V+F  L 
Sbjct: 85  TLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTIVWF-GLG 143

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G         +F I  + V+ +  +    + NIP+D    +RS     W  F  + VP 
Sbjct: 144 DGP-------TVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNVIVPG 196

Query: 188 SMPGLVWNMMMSMSGGWFFVV 208
           S+P ++    +++  GW  V+
Sbjct: 197 SLPDILTGGRIAVGLGWMSVI 217


>gi|84685623|ref|ZP_01013520.1| ABC transporter, permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666289|gb|EAQ12762.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 269

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++  + V + +A +I +  G++IG    +     P    L + P     P+V+  +   
Sbjct: 71  VSLSNMAVGLALAILIGVGTGLYIGDHAKVRQAAMPMLNFLRSVPPAAIVPIVIIALG-I 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P ++   ++ F   W IL N I G    P +  + A +F I     +R ++L    P
Sbjct: 130 GAAPKIF---IIAFTCLWPILLNTIDGVRGMPEELSDTARAFRIPRGLTYRRVLLMASLP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             + G   A   A    ++SE          + GLG YI E+ ++ +  E   G +++
Sbjct: 187 QIMAGIRVAIAVALVLMVISEFFG------ASAGLGFYINENKQRFAMVETWAGTILI 238


>gi|24111695|ref|NP_706205.1| taurine transporter subunit [Shigella flexneri 2a str. 301]
 gi|30061820|ref|NP_835991.1| taurine transporter subunit [Shigella flexneri 2a str. 2457T]
 gi|110804390|ref|YP_687910.1| taurine transporter subunit [Shigella flexneri 5 str. 8401]
 gi|157157564|ref|YP_001461542.1| taurine transporter subunit [Escherichia coli E24377A]
 gi|191166752|ref|ZP_03028579.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|193065230|ref|ZP_03046303.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E22]
 gi|193068646|ref|ZP_03049607.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|209917580|ref|YP_002291664.1| taurine transporter subunit [Escherichia coli SE11]
 gi|218552930|ref|YP_002385843.1| taurine transporter subunit [Escherichia coli IAI1]
 gi|256020340|ref|ZP_05434205.1| taurine transporter subunit [Shigella sp. D9]
 gi|260842571|ref|YP_003220349.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str.
           12009]
 gi|260853593|ref|YP_003227484.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str.
           11368]
 gi|300818312|ref|ZP_07098523.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300820398|ref|ZP_07100550.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|307312253|ref|ZP_07591889.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|309794911|ref|ZP_07689332.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312970457|ref|ZP_07784638.1| taurine transport system permease protein tauC [Escherichia coli
           1827-70]
 gi|331666715|ref|ZP_08367589.1| taurine transport system permease protein TauC [Escherichia coli
           TA271]
 gi|331676031|ref|ZP_08376743.1| taurine transport system permease protein TauC [Escherichia coli
           H591]
 gi|332281511|ref|ZP_08393924.1| taurine uptake ABC transporter [Shigella sp. D9]
 gi|24050472|gb|AAN41912.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30040062|gb|AAP15796.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110613938|gb|ABF02605.1| taurine transport system permease protein [Shigella flexneri 5 str.
           8401]
 gi|157079594|gb|ABV19302.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|190903263|gb|EDV62985.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|192927204|gb|EDV81825.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E22]
 gi|192958009|gb|EDV88451.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|209910839|dbj|BAG75913.1| taurine ABC transporter permease component [Escherichia coli SE11]
 gi|218359698|emb|CAQ97239.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|257752242|dbj|BAI23744.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str.
           11368]
 gi|257757718|dbj|BAI29215.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str.
           12009]
 gi|281599613|gb|ADA72597.1| Taurine transport system permease protein [Shigella flexneri
           2002017]
 gi|300527183|gb|EFK48252.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529203|gb|EFK50265.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|306907755|gb|EFN38257.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|308121564|gb|EFO58826.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|310337106|gb|EFQ02244.1| taurine transport system permease protein tauC [Escherichia coli
           1827-70]
 gi|313646668|gb|EFS11127.1| taurine transport system permease protein tauC [Shigella flexneri
           2a str. 2457T]
 gi|315059650|gb|ADT73977.1| taurine transporter subunit [Escherichia coli W]
 gi|323152103|gb|EFZ38397.1| taurine transport system permease protein tauC [Escherichia coli
           EPECa14]
 gi|323171143|gb|EFZ56792.1| taurine transport system permease protein tauC [Escherichia coli
           LT-68]
 gi|323184807|gb|EFZ70178.1| taurine transport system permease protein tauC [Escherichia coli
           1357]
 gi|323379786|gb|ADX52054.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|324016636|gb|EGB85855.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116853|gb|EGC10766.1| inner membrane transport system [Escherichia coli E1167]
 gi|331065939|gb|EGI37823.1| taurine transport system permease protein TauC [Escherichia coli
           TA271]
 gi|331076089|gb|EGI47371.1| taurine transport system permease protein TauC [Escherichia coli
           H591]
 gi|332103863|gb|EGJ07209.1| taurine uptake ABC transporter [Shigella sp. D9]
 gi|332761613|gb|EGJ91893.1| taurine transport system permease protein tauC [Shigella flexneri
           4343-70]
 gi|332764415|gb|EGJ94648.1| taurine transport system permease protein tauC [Shigella flexneri
           K-671]
 gi|333008725|gb|EGK28189.1| taurine transport system permease protein tauC [Shigella flexneri
           K-218]
 gi|333022109|gb|EGK41352.1| taurine transport system permease protein tauC [Shigella flexneri
           K-304]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|75674870|ref|YP_317291.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419740|gb|ABA03939.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 17/197 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   +AS + I +G+ +G      + I P+ +++   PA  + PL +       
Sbjct: 83  SLRRIAIAYALASALGIGLGLAVGRSRLARAVILPYVEIIRPIPAVAWIPLAIL------ 136

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P    S++ I   G  + IL N I G    P      A S   +    +++++LP   
Sbjct: 137 MWPTEESSIIYITALGAMFPILLNTIHGVEQTPEILVRAAQSLGASRLAIFQHVVLPSAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ VTG     G +W + +  E+ S  +      G+G +   +     +PE+V+G++++ 
Sbjct: 197 PHIVTGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLILYPEIVVGMIVIG 250

Query: 564 CFVLALN---RFLWHPL 577
               A     R L  PL
Sbjct: 251 LLGTASTHAVRLLTRPL 267


>gi|157159883|ref|YP_001457201.1| taurine transporter subunit [Escherichia coli HS]
 gi|157065563|gb|ABV04818.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           HS]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|227112289|ref|ZP_03825945.1| nitrate transporter permease component [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 305

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 144 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 195

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 196 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTG 255

Query: 216 G 216
           G
Sbjct: 256 G 256



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP G  IG    +++ + P   LL       + P  +  
Sbjct: 111 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 168

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ +   R I+LP
Sbjct: 169 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 226

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + P  +TG   + G AW   + +E+ + G
Sbjct: 227 AVLPNMLTGVRLSIGVAWLVIVAAEMLTGG 256


>gi|150395875|ref|YP_001326342.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150027390|gb|ABR59507.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 295

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 25/187 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+S+        + ++S R   V+ P+LD+MQ++P   +L   V   M L  GKV G   
Sbjct: 112 VLSIAVGIPMGIIMSRSDRFQNVVNPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168

Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191
             I+AI    ++ N+   +      + +D+ E + +F  S WQK   + +P ++P    G
Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAG 222

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +MM+++          M+V+  ++I + G+G  +  AI  Q     ++  L ++G+
Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 272 AIIFDRV 278


>gi|194432572|ref|ZP_03064858.1| taurine uptake ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|194419133|gb|EDX35216.1| taurine uptake ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|332085640|gb|EGI90804.1| taurine transport system permease protein tauC [Shigella
           dysenteriae 155-74]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|15599131|ref|NP_252625.1| permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1]
 gi|107103453|ref|ZP_01367371.1| hypothetical protein PaerPA_01004523 [Pseudomonas aeruginosa PACS2]
 gi|116051976|ref|YP_789181.1| taurine ABC transporter permease [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889782|ref|YP_002438646.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254236829|ref|ZP_04930152.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719]
 gi|254242624|ref|ZP_04935946.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192]
 gi|9950122|gb|AAG07323.1|AE004811_6 probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa PAO1]
 gi|115587197|gb|ABJ13212.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126168760|gb|EAZ54271.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719]
 gi|126196002|gb|EAZ60065.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192]
 gi|218770005|emb|CAW25767.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 272

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + PL+V       
Sbjct: 84  SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L +F     +L    AG         +       + W+  RY+ILP   P 
Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199

Query: 506 YVTGAITACGGAWNASIVSEV 526
            +TG   A G  W+  + +E+
Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L   
Sbjct: 76  SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG EL+ +  I+ +    +  +    +  + R   +  R    S WQ 
Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Y+ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221


>gi|332800284|ref|YP_004461783.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332698019|gb|AEE92476.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 282

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 29/173 (16%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+++++ +L         A + +  ++L PILD MQ++P   +L   +++F         
Sbjct: 101 LTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPSFVYLIPAMIFF--------- 151

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              L  + A+F + +++    +  +   + N+P ++ E + SF  S WQ    + +P +M
Sbjct: 152 --GLGTVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSRWQTLIKVELPQAM 209

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           P    G+    MM+MS           +VV  ++I   G+G  + +AI   D+
Sbjct: 210 PTIMAGINQTTMMAMS-----------MVVISSMIGAKGLGENVLIAINRSDI 251


>gi|307131481|ref|YP_003883497.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306529010|gb|ADM98940.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 263

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 21/194 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ S +T R L+   I          +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLSISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F ++         + Y  + NI   L E+SRS+ LSG++ F  
Sbjct: 120 FGIEESAKIFLVALGTLFPVY--------LNTYHGIRNIDSGLLEMSRSYGLSGFRLFRE 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  S+   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLG 250
               ILYA+L  L 
Sbjct: 225 VVAIILYALLGKLA 238



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 35/210 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +    I   + + +G   G        +    Q+L   P     PLV+     
Sbjct: 63  SISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVI----- 117

Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                 LW  +       L+  GT + +  N   G     +   E++ S+ ++G+R +R 
Sbjct: 118 ------LWFGIEESAKIFLVALGTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFRE 171

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P  + G   + G  W   IV+E  S       ++G+G Y+A +  +    +VV
Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVV 224

Query: 557 LGVLIMCCFV--------LALNR--FLWHP 576
           +  +I+   +        L L R    WHP
Sbjct: 225 VVAIILYALLGKLADVIALTLERIWLRWHP 254


>gi|313200731|ref|YP_004039389.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|312440047|gb|ADQ84153.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 320

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S++ +P+GI  G    +S   +PF +     PA  F  L V+ +  Y   P + + +
Sbjct: 135 VISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 193

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +  F  Q  I+ N             E A +   + W+  R++++PG+ P          
Sbjct: 194 IGTFFQQVLIISNT---TRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILL 250

Query: 515 GGAWNASIVSEV 526
           G AW   IV+E+
Sbjct: 251 GWAWTYLIVAEL 262


>gi|296104355|ref|YP_003614501.1| glycine betaine/proline transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058814|gb|ADF63552.1| glycine betaine/proline transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 354

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|218511038|ref|ZP_03508916.1| binding-protein dependent transport system inner membrane protein
           [Rhizobium etli Brasil 5]
          Length = 264

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 19/234 (8%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           Q    P D+       L    L  + S +  R+ +   I+ +       +  +SR++G  
Sbjct: 42  QNVPSPVDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIGRSRKVGDF 101

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+  L++++ IP + ++   V+ F +        +EL+ IF  FT  ++ +  +    + 
Sbjct: 102 LLAPLELLRPIPAVAWIPLAVLMFPS--------SELSMIFITFTGALFPILLNTVHGVE 153

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +   L   ++S   +     + + +P + P +V  + + M   WF +V +EMI  G   
Sbjct: 154 GVDPRLIAAAKSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAEMI-SGQF- 211

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSNK 269
               GIG Y   A   Q+   I+  M  ++GV+ +    L R     +I W  K
Sbjct: 212 ----GIGYYTWEAYTLQNYPEIIVGM-AVIGVLGIGSSTLLRAVGNALIPWQKK 260



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     IA+++ I  G+ IG    +   +    +LL   PA  + PL V       
Sbjct: 70  SLERVFAGYAIAAVVGIACGLIIGRSRKVGDFLLAPLELLRPIPAVAWIPLAV------L 123

Query: 446 LNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + G           A S   T       +ILPG  
Sbjct: 124 MFPSSELSMIFITFTGALFPILLNTVHGVEGVDPRLIAAAKSLGSTRRAMLFEVILPGAA 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  VTG     G +W   + +E+ S G       G+G Y  E+    ++PE+++G+ ++
Sbjct: 184 PSIVTGLAIGMGTSWFCLVTAEMIS-GQF-----GIGYYTWEAYTLQNYPEIIVGMAVI 236


>gi|150010418|ref|YP_001305161.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|237708446|ref|ZP_04538927.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|149938842|gb|ABR45539.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|229457667|gb|EEO63388.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
          Length = 271

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++LL        A KS R   +L P+LD MQ++P   +L   V++
Sbjct: 83  EETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLF 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V GA    IFA+    V  +T      +  +P ++ E +RSF  +  Q  + 
Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPENVIEAARSFGATPRQLLFK 194

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +P ++P    G+   +MM++S     VV S MI  G 
Sbjct: 195 VQLPLALPTILTGINQTIMMALS----MVVVSAMISAGG 229


>gi|171910074|ref|ZP_02925544.1| putative integral membrane components of the ABC transporters
           [Verrucomicrobium spinosum DSM 4136]
          Length = 255

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 11/203 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL + A  T+ R+L    I  L       L A+SR L   +  +   +Q++P + ++   
Sbjct: 50  SLAESAWVTSKRLLIGYAIGCLLGLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLA 109

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F          +E A +F +    +W++  ++   + N+P      +R+    G+  
Sbjct: 110 LLWFGQ--------SEAAMLFVVVMGTLWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHT 161

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+P +V  M    +  W  ++A+E+ V   T++   G+G  +    +   + 
Sbjct: 162 LRSVILPASLPYVVSGMKQGWAFAWRSLMAAEIYV---TILTGYGLGHLLHFGRELNSMD 218

Query: 240 AILYAMLTMLGVIFLYDQLLFRP 262
            ++  ML ++ +  L D++LF P
Sbjct: 219 QVIGVMLVIVLIGLLADKVLFSP 241



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 9/193 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T  R+++   I  ++ +P+G+       +S  +   A  L   P+  + PL +     +
Sbjct: 57  VTSKRLLIGYAIGCLLGLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLAL----LW 112

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  +++ GT W +L  V  G    P  +   A +    G+   R +ILP   P
Sbjct: 113 FGQSEAAMLFVVVMGTLWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHTLRSVILPASLP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563
           Y V+G       AW + + +E+    ++ + T  GLG  +    E  S  +V+  +L++ 
Sbjct: 173 YVVSGMKQGWAFAWRSLMAAEI----YVTILTGYGLGHLLHFGRELNSMDQVIGVMLVIV 228

Query: 564 CFVLALNRFLWHP 576
              L  ++ L+ P
Sbjct: 229 LIGLLADKVLFSP 241


>gi|149181988|ref|ZP_01860475.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1]
 gi|148850333|gb|EDL64496.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1]
          Length = 276

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 27/171 (15%)

Query: 73  LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ ++++ LF+ V       L+AKS  L  V+ PILD MQ++P   +L   ++ F     
Sbjct: 94  LAVVIVATLFSIVLGVPLGILSAKSEALNKVVRPILDFMQTLPSFVYLIPAILLFGL--- 150

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E+ A+ + F             ++  +P D+ E +R+F  + WQ    + +P +
Sbjct: 151 -----GEVPAVISTFVFATPPAVRMTSLAIRQVPADMVEAARAFGSTSWQMLTKVQLPVA 205

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +P    G+   +M+++S     V+AS        +I  PG+GS +   I  
Sbjct: 206 VPTIMAGINQTIMLALS---MAVIAS--------MIGAPGLGSTVLAGISS 245


>gi|70730544|ref|YP_260285.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344843|gb|AAY92449.1| ABC transporter, permease protein, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 253

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 8/111 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   ++ +P+LG++    ++F N         E + +  +  +  + M  + YQ LC +
Sbjct: 95  PLFHSIRQVPMLGWIPLIAMWFGN--------GEFSKMLIVSLAAFYPMVLNTYQGLCQV 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            R   EV +   L+  Q+  ++ +P ++P +   ++ +++  W   V SE+
Sbjct: 147 ERRYREVGQVLVLNPAQRLRHILLPAALPSIATGLLQALAFAWVTAVGSEL 197


>gi|313109371|ref|ZP_07795334.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa 39016]
 gi|310881836|gb|EFQ40430.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa 39016]
          Length = 272

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + PL+V       
Sbjct: 84  SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L +F     +L    AG         +       + W+  RY+ILP   P 
Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199

Query: 506 YVTGAITACGGAWNASIVSEV 526
            +TG   A G  W+  + +E+
Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L   
Sbjct: 76  SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG EL+ +  I+ +    +  +    +  + R   +  R    S WQ 
Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Y+ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221


>gi|146312799|ref|YP_001177873.1| glycine betaine transporter membrane protein [Enterobacter sp. 638]
 gi|145319675|gb|ABP61822.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|186472306|ref|YP_001859648.1| choline ABC transporter, permease protein [Burkholderia phymatum
           STM815]
 gi|184194638|gb|ACC72602.1| choline ABC transporter, permease protein [Burkholderia phymatum
           STM815]
          Length = 301

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+F       AAK++ + MV+ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTLISLVFGIPLGIWAAKNKHVQMVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLTSL-----GIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|71734144|ref|YP_276955.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554697|gb|AAZ33908.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 283

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            +MP    G+    MM++S          M+V+  ++I   G+G  + + I+  +L   L
Sbjct: 206 LAMPSIMAGINQTTMMALS----------MVVIA-SMIGARGLGEDVLVGIQTLNLGRGL 254

Query: 243 YAMLTMLGVIFLYDQL 258
            A L ++ +  + D++
Sbjct: 255 EAGLAIVILAVVIDRI 270


>gi|300924083|ref|ZP_07140077.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301330780|ref|ZP_07223378.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|300419679|gb|EFK02990.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300843293|gb|EFK71053.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|320201610|gb|EFW76186.1| Taurine transport system permease protein TauC [Escherichia coli
           EC4100B]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|190894928|ref|YP_001985221.1| putative glycine betaine/L-proline ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700589|gb|ACE94671.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 295

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 17/193 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    V+S+        L A+S RL  ++ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTVLSIAIGIPIGILMARSDRLQRIVNPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     I+AI    ++ ++   +      + +D+ E + +F  S  QK + + +
Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSRSQKLFKVQL 212

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  
Sbjct: 213 PLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNG 265

Query: 246 LTMLGVIFLYDQL 258
           L ++G+  ++D++
Sbjct: 266 LAIVGIAIIFDRV 278


>gi|26246370|ref|NP_752409.1| taurine transporter subunit [Escherichia coli CFT073]
 gi|218688234|ref|YP_002396446.1| taurine transporter subunit [Escherichia coli ED1a]
 gi|227884628|ref|ZP_04002433.1| taurine transporter subunit [Escherichia coli 83972]
 gi|300988135|ref|ZP_07178572.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301049560|ref|ZP_07196514.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|306813164|ref|ZP_07447357.1| taurine transporter subunit [Escherichia coli NC101]
 gi|331656421|ref|ZP_08357383.1| taurine transport system permease protein TauC [Escherichia coli
           TA206]
 gi|26106768|gb|AAN78953.1|AE016756_136 Taurine transport system permease protein tauC [Escherichia coli
           CFT073]
 gi|218425798|emb|CAR06604.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|222032167|emb|CAP74906.1| Taurine transport system permease protein tauC [Escherichia coli
           LF82]
 gi|227838714|gb|EEJ49180.1| taurine transporter subunit [Escherichia coli 83972]
 gi|300298651|gb|EFJ55036.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300407549|gb|EFJ91087.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|305853927|gb|EFM54366.1| taurine transporter subunit [Escherichia coli NC101]
 gi|307552275|gb|ADN45050.1| taurine transport system permease protein TauC [Escherichia coli
           ABU 83972]
 gi|312944948|gb|ADR25775.1| taurine transporter subunit [Escherichia coli O83:H1 str. NRG 857C]
 gi|315294163|gb|EFU53514.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|331054669|gb|EGI26678.1| taurine transport system permease protein TauC [Escherichia coli
           TA206]
          Length = 275

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|329905904|ref|ZP_08274285.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547435|gb|EGF32258.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 307

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 116 SLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWLP--IGLLVFKA 173

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    S+ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 174 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKILFPSVLPY 231

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 232 MLTGVRLAIGTAWLVIVAAEMLTGG 256



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          A+ AAI++IF   +W M  +    +  +
Sbjct: 150 PIISLLKPVSPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRV 201

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 202 PQDYMNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 256


>gi|296387539|ref|ZP_06877014.1| taurine ABC transporter permease [Pseudomonas aeruginosa PAb1]
          Length = 262

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + PL+V       
Sbjct: 74  SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 133

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L +F     +L    AG         +       + W+  RY+ILP   P 
Sbjct: 134 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 189

Query: 506 YVTGAITACGGAWNASIVSEV 526
            +TG   A G  W+  + +E+
Sbjct: 190 VLTGLRIALGVGWSTLVAAEL 210



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L   
Sbjct: 66  SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 125

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG EL+ +  I+ +    +  +    +  + R   +  R    S WQ 
Sbjct: 126 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 177

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Y+ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 178 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 211


>gi|332761727|gb|EGJ92006.1| taurine transport system permease protein tauC [Shigella flexneri
           2747-71]
 gi|332768548|gb|EGJ98730.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
          Length = 273

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 79  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 139 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 195 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 233


>gi|206580359|ref|YP_002236982.1| glycine betaine/L-proline ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288933940|ref|YP_003437999.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510982|ref|ZP_06550351.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp.
           1_1_55]
 gi|206569417|gb|ACI11193.1| glycine betaine/L-proline ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288888669|gb|ADC56987.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289775975|gb|EFD83974.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp.
           1_1_55]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|170724167|ref|YP_001751855.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762170|gb|ACA75486.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 260

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 18/159 (11%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYIL 465
           IG        + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL
Sbjct: 88  IGRSQWAEDTLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMVFITFTGALFPIL 141

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIFPYYVTGAITACGGAWNASIV 523
            N + G  A   D + VAS+  +   RW   R ++LPG  P  VTG     G +W   + 
Sbjct: 142 LNTVHGVEAV--DPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVT 199

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           +E+ S G       G+G Y  ES    ++P++++G+L++
Sbjct: 200 AEMIS-GQF-----GIGYYTWESYTLQNYPDIIVGMLLI 232



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L+P L++++ IP + ++   ++ F +        +EL+ +F  FT  ++ +  +    +
Sbjct: 97  TLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMVFITFTGALFPILLNTVHGV 148

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             +   L   +RS     W     + +P ++P +V  + + M   WF +V +EMI
Sbjct: 149 EAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMI 203


>gi|49083481|gb|AAT51045.1| PA3936 [synthetic construct]
          Length = 273

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + PL+V       
Sbjct: 84  SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L +F     +L    AG         +       + W+  RY+ILP   P 
Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199

Query: 506 YVTGAITACGGAWNASIVSEV 526
            +TG   A G  W+  + +E+
Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L   
Sbjct: 76  SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG EL+ +  I+ +    +  +    +  + R   +  R    S WQ 
Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Y+ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221


>gi|116749648|ref|YP_846335.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698712|gb|ABK17900.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 290

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 26/226 (11%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           QSI  +++ + Y+ V +       ++FRV++    AS I IP+G+ +G+   +     P 
Sbjct: 80  QSIKTVMDPWYYKSVYH-------SLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPG 132

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +L  + P   + PL +   +    +    +  +   G  + +  N   GA +       
Sbjct: 133 FELFRSVPPVAWVPLSIIIFAQMEYS----IVFITFTGAFFVVALNAKLGAESIDQSLFR 188

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A        + +R+I+LPG  P    G     G AW   + +E+ +  +      GLG 
Sbjct: 189 AAWCLGANPRQVFRHILLPGSLPSIFMGLALGMGIAWQTVVAAEMIAGQY------GLGY 242

Query: 542 YIAESTEKGSFPEVVL-----GVLIMCCFVL---ALNRFL-WHPLY 578
              ES     FPEV+L     GVL   C  +     N++L W  +Y
Sbjct: 243 LAWESYSLIRFPEVILAMASIGVLGYVCSAILRGIANKYLAWRKVY 288


>gi|292655752|ref|YP_003535649.1| putative sulfonate ABC transporter permease [Haloferax volcanii
           DS2]
 gi|291372837|gb|ADE05064.1| ABC-type transport system permease protein (probable substrate
           sulfonate) [Haloferax volcanii DS2]
          Length = 289

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R+  V  P+  +++ IP L ++ F V++    + G        A F +     W   +S 
Sbjct: 127 RVDSVFTPVTRLLRPIPPLAWIGFAVIWLGVNHQG--------ATFIVAIGSFWINFYSA 178

Query: 155 YQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           Y  +  +  DL+EV+ +  +   W     + +P + P ++  +  S+   W  VVA+E+I
Sbjct: 179 YGGVEGVSEDLKEVAATLGVDDDWTMIRKVVIPAASPSIMTGIRTSIGQCWMIVVAAELI 238

Query: 214 VVGDTVIPLPGIG-SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           V         G+G  Y  L   +   + +  A + ++ ++FL    LFR
Sbjct: 239 V---------GVGVGYEILNTAQNLAMDVSVAYMLVISIVFLVSDGLFR 278



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 5/142 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++  V  ++I + + +  GI +G+   + S   P  +LL   P   +    V  +   H
Sbjct: 100 SLYHYVPGLLIGTSLGVFAGIAMGWNTRVDSVFTPVTRLLRPIPPLAWIGFAVIWLGVNH 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504
                  + ++  G+ W   ++   G      D KEVA++  +   W   R +++P   P
Sbjct: 160 QGA----TFIVAIGSFWINFYSAYGGVEGVSEDLKEVAATLGVDDDWTMIRKVVIPAASP 215

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG  T+ G  W   + +E+
Sbjct: 216 SIMTGIRTSIGQCWMIVVAAEL 237


>gi|253998658|ref|YP_003050721.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|253985337|gb|ACT50194.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
          Length = 320

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S++ +P+GI  G    +S   +PF +     PA  F  L V+ +  Y   P + + +
Sbjct: 135 VISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 193

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +  F  Q  I+ N             E A +   + W+  R++++PG+ P          
Sbjct: 194 IGTFFQQVLIISNT---TRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILL 250

Query: 515 GGAWNASIVSEV 526
           G AW   IV+E+
Sbjct: 251 GWAWTYLIVAEL 262


>gi|88856241|ref|ZP_01130901.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1]
 gi|88814560|gb|EAR24422.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1]
          Length = 283

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +T R+L    +  +   V A +   S R+  +  P L  ++++P L ++    +Y
Sbjct: 88  QHVAISTQRVLVGFAVGSVVGLVLAAIVGLSTRVSELFAPTLGALRAVPSLAWVPLLGLY 147

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  KV    + A F ++T        ++  +L ++   L E+ RS+  SG      
Sbjct: 148 LGYGEDPKVALIAIGAFFPVYT--------TVASALRHVDAHLVELGRSYGYSGPALLSL 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P  +P ++ ++ ++++  W F+VA E++
Sbjct: 200 VQLPAVVPAVISSLRLALAQAWLFLVAGELL 230


>gi|119385086|ref|YP_916142.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119374853|gb|ABL70446.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 260

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           PP +   + P +  +LA +LV  + + L    Q    P ++   +        L   A  
Sbjct: 7   PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126
           T  R++++  +++           +SR     L P L I+ ++P L  +    ++  +N 
Sbjct: 67  TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E AAI A+  +++  +T  + +    +  DL++++R+FR+  W +  ++ +P
Sbjct: 126 --------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLP 177

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P +  +    +S  W  V+  E +   +      G+G  I L     D+  +L   L
Sbjct: 178 QLAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWAL 231

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273
             + V+   D +L RP    +N++R +
Sbjct: 232 AFVAVMLAIDLILLRPWESRANRWRQD 258


>gi|253582359|ref|ZP_04859582.1| ABC transporter permease [Fusobacterium varium ATCC 27725]
 gi|251835898|gb|EES64436.1| ABC transporter permease [Fusobacterium varium ATCC 27725]
          Length = 287

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 23/191 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+A+ ISLL  F    L + + ++   + PILD MQ++P+  +L   V++F       V
Sbjct: 103 VLAAVFISLLLGFPIGILISGNDKINGFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 162

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           I   + AI  +               +  + +++ E +R+F  + +Q  W + +P ++P 
Sbjct: 163 IATTIYAIVPVIRLT--------SHGIRQVDKEVVEAARAFGSTKFQTLWKVQIPQALPT 214

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
              G+   +MM+M+           +VV  ++I   G+G  + + +   ++   L A   
Sbjct: 215 IMTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLIGVNRIEIGRGLVAGTA 263

Query: 248 MLGVIFLYDQL 258
           ++ V  L D++
Sbjct: 264 VVIVAILMDRI 274


>gi|238896133|ref|YP_002920869.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238548451|dbj|BAH64802.1| glycine/betaine/proline transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|261820839|ref|YP_003258945.1| nitrate ABC transporter inner membrane protein [Pectobacterium
           wasabiae WPP163]
 gi|261604852|gb|ACX87338.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           wasabiae WPP163]
          Length = 304

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 143 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 194

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 195 EGVRRIPQDYLNVARVLKLSEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 254

Query: 216 G 216
           G
Sbjct: 255 G 255



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP G  IG    +++ + P   LL       + P  +  
Sbjct: 110 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 167

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ +     I+LP
Sbjct: 168 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMHKILLP 225

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + P  +TG   + G AW   + +E+ + G
Sbjct: 226 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 255


>gi|288960217|ref|YP_003450557.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288912525|dbj|BAI74013.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 281

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L VH L     R  L  LS ++   L   +   L   +RRL     P L  +++IP + +
Sbjct: 79  LSVHILATLG-RVGLGFLSGVLAGTLLGALTGYLTV-ARRL---FDPTLQALRAIPSIAW 133

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F      K+I   +   F I+         ++  ++  + R L EV R FR+S
Sbjct: 134 VPLFILWFGIFETSKIILIAVGVFFPIY--------LALSGAIQGVDRKLVEVGRIFRMS 185

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G +  W + +P ++P  +  +   +  GW FVVA+E +   +      G+G  +      
Sbjct: 186 GVELVWRILLPATLPSYLLALRAGLGLGWMFVVAAEFMGASE------GLGFLLTDGQMT 239

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271
                IL ++L    +  L D LL    RP++ W + F+
Sbjct: 240 GQPQTILASILAFAVLGKLSDGLLAALSRPLLRWQDSFK 278


>gi|262278786|ref|ZP_06056571.1| taurine transporter [Acinetobacter calcoaceticus RUH2202]
 gi|262259137|gb|EEY77870.1| taurine transporter [Acinetobacter calcoaceticus RUH2202]
          Length = 289

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|269925524|ref|YP_003322147.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
 gi|269789184|gb|ACZ41325.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 271

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V+  + A  R +  +L P +   Q++P++       ++F     GKVI   L   F I  
Sbjct: 98  VFGYILAHWRAVERLLSPHIAASQALPVVAIAPLITLWFGYGLLGKVIVCALVVFFPILV 157

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + +          + N+PRDL EV++ +    WQ FW + +P S+P L+  + + ++
Sbjct: 158 NTI--------VGIRNVPRDLIEVAQVYGAGWWQTFWMVELPLSLPVLLGGIRLGLT 206


>gi|330013350|ref|ZP_08307621.1| glycine betaine/L-proline transport system permease protein ProW
           [Klebsiella sp. MS 92-3]
 gi|328533538|gb|EGF60261.1| glycine betaine/L-proline transport system permease protein ProW
           [Klebsiella sp. MS 92-3]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|323178374|gb|EFZ63952.1| taurine transport system permease protein tauC [Escherichia coli
           1180]
          Length = 252

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 60  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 120 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 176 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 212


>gi|296101975|ref|YP_003612121.1| nitrate ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056434|gb|ADF61172.1| nitrate ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 293

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 190 PQDYLNVARVLQLSEWTILRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 18/203 (8%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V   +A+++ IP+G  IG     S    P   LL       + P  +  
Sbjct: 99  WNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAWLP--IGL 156

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P
Sbjct: 157 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFP 214

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555
            + P  +TG   + G AW   + +E+ + G       G+G +I       +   +     
Sbjct: 215 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 268

Query: 556 ---VLGVLIMCCFVLALNRFLWH 575
              V+G+L+    +L   RF W 
Sbjct: 269 IIGVVGLLLEQGLMLIARRFSWQ 291


>gi|320326290|gb|EFW82343.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331710|gb|EFW87648.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872451|gb|EGH06600.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 283

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|312866168|ref|ZP_07726389.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           downei F0415]
 gi|311098572|gb|EFQ56795.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           downei F0415]
          Length = 311

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P ++++  IP  + GF+   VV  +   L+ G   G  L+ +F +F   +  
Sbjct: 119 KRGARLLQPTIELLTGIPSVVYGFIGLQVVVPFVRTLFGGTGFGI-LSGVFVLFVMILPT 177

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +TF    SL ++PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A
Sbjct: 178 VTFMTTDSLRSVPRHYREASLAMGATRWQTIWRVVLRAAKPGIFTAVVFGMARAFGEALA 237

Query: 210 SEMIVVGDTVIP 221
            +M+V    V+P
Sbjct: 238 IQMVVGNSPVMP 249


>gi|299770270|ref|YP_003732296.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp.
           DR1]
 gi|298700358|gb|ADI90923.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp.
           DR1]
          Length = 284

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNITTGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/250 (18%), Positives = 107/250 (42%), Gaps = 23/250 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  F + +GI+N           P D++  +     + +  ++   +  R++   V++ 
Sbjct: 49  GLAQFKINLGIVNF-----SNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAA 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       LA + ++L   L+P L++++ IP + ++   ++ F +        +E + IF
Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F   ++ +  +    +  +   L   ++S   S     + + +P ++P +   + + M
Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNITTGLSIGM 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              WF +V +EMI          GIG +   +   Q+   I+  M+ ++G + ++   L 
Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268

Query: 261 RPMIVWSNKF 270
           R   V  N+F
Sbjct: 269 R---VIGNRF 275


>gi|302554022|ref|ZP_07306364.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471640|gb|EFL34733.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 287

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 16/188 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT R+L+   +     ++   L      +   L P+LD +  +P L  L      F+N++
Sbjct: 90  TTRRVLAGYAVGTAAGYLLGLLMGSLPLVRAALEPLLDALYVVPKLALLPV----FLNMF 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G ++A + A     VW  T S   ++  +P    +  R F  S WQ F ++ +P 
Sbjct: 146 -GLGEGPQVALVAATVFFFVWISTMS---AVMAVPDGHRDAGRVFGASPWQMFRHVLLPA 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245
           S+P ++    ++       +VASE I   D      G+G  I  + A+ + D++ +    
Sbjct: 202 SLPAVLVGARIAAGVAVLVIVASEQIAASD------GLGHLIFDSRALFQNDVMFVGIVC 255

Query: 246 LTMLGVIF 253
           + +LGV+F
Sbjct: 256 VAVLGVLF 263



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 12/166 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+ +G  P + + ++P    L   P     P+ ++        P + L    +F   ++
Sbjct: 108 LGLLMGSLPLVRAALEPLLDALYVVPKLALLPVFLNMFGLGE-GPQVALVAATVF---FF 163

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  + ++   A P+  ++    F  + W+ +R+++LP   P  + GA  A G A    + 
Sbjct: 164 VWISTMSAVMAVPDGHRDAGRVFGASPWQMFRHVLLPASLPAVLVGARIAAGVAVLVIVA 223

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           SE  +       + GLG  I +S  +  F   V+ V I+C  VL +
Sbjct: 224 SEQIA------ASDGLGHLIFDS--RALFQNDVMFVGIVCVAVLGV 261


>gi|253689108|ref|YP_003018298.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755686|gb|ACT13762.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 304

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 143 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 194

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 195 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 254

Query: 216 G 216
           G
Sbjct: 255 G 255



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP G  IG    +++ + P   LL       + P  +  
Sbjct: 110 WNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 167

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ +   R I+LP
Sbjct: 168 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 225

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + P  +TG   + G AW   + +E+ + G
Sbjct: 226 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 255


>gi|91775909|ref|YP_545665.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91709896|gb|ABE49824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 260

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 97/216 (44%), Gaps = 16/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +    L Q  + +  R    ++I     F    + A  R   +++ P+  +++ +P++G 
Sbjct: 56  ISTGELQQGVAASLQRAFLGLLIGGSIGFGVGAVMALWRVADILIGPLYHMLRQVPLMGL 115

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    ++  N  P K++   L+A +         M  + Y+SL  +    +EV   ++L 
Sbjct: 116 VPLFSLWLGNGDPSKLLVVCLSAFYP--------MVLATYESLHQVEEKYKEVGDVYKLG 167

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAI 233
             + F+ + +P ++P +   +  +++  W   + SE++          G+G+ +  A A 
Sbjct: 168 RSKTFFKILLPAALPSIFTGVSFALAFAWLATIGSEILFSAGA-----GLGNIMMNAQAA 222

Query: 234 KEQDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSN 268
              D+L IL A++ +LG +  L  Q + R +  W N
Sbjct: 223 SRMDILIILTALIGLLGYLMNLLIQQVGRYLFRWRN 258


>gi|332707644|ref|ZP_08427672.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane
           protein 2 [Lyngbya majuscula 3L]
 gi|332353553|gb|EGJ33065.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane
           protein 2 [Lyngbya majuscula 3L]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             S  LG++L  ++   Q   I G+L    + ++N Y G ++ + + A F          
Sbjct: 103 GNSLLLGIILAVLMIPGQVTLIPGYLILKSLGWLNTYQGLIVPSAVNATF---------- 152

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
            F M Q   N P++LEE +    LS W+ FW + +P + P L    +    G W   +  
Sbjct: 153 IFMMRQFFINFPKELEEAAALDGLSRWETFWQVVLPLAKPALAAQAIFIFMGSWNNFLMP 212

Query: 211 EMIVVGDTVIPLP 223
            MI     +  LP
Sbjct: 213 LMITSDPGMFTLP 225


>gi|325846755|ref|ZP_08169670.1| glycine betaine transport system permease protein opuAB
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481513|gb|EGC84554.1| glycine betaine transport system permease protein opuAB
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 280

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
           +KS  +  V++P+LD MQ++P   +L   V +F + + PG +     A   A+  + +  
Sbjct: 118 SKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPGVISSVIFAMPPAVRMTNL-- 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
                   +  +P DL E + SF  +  QK + L +P + P    G+   +M+++S    
Sbjct: 176 -------GIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLS---- 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+VV  ++I  PG+G+ I  ++   D+
Sbjct: 225 ------MVVVA-SMIGAPGLGNVIYTSVSRNDV 250


>gi|332716766|ref|YP_004444232.1| glycine betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325063451|gb|ADY67141.1| glycine betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 25/187 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+S++         A+S RL  ++ P+LD+MQ++P   +L   V   M L  G+V G   
Sbjct: 112 VLSIVIGLPIGIAMARSNRLQSIVNPVLDVMQTMPSFVYLIPVV---MLLGIGRVPGVIA 168

Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191
             I+AI    ++ N+   M      + RD+ E + ++  S  QK + + +P ++P    G
Sbjct: 169 VVIYAIPPMIRLTNLGIRM------VDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAG 222

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +MM+++          M+V+  ++I + G+G  +  AI  Q     ++  L ++G+
Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGI 271

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 272 AIIFDRI 278


>gi|291458647|ref|ZP_06598037.1| taurine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291419180|gb|EFE92899.1| taurine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 242

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 21/212 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L+    + L   V       S     ++ PI++ ++ +PI+ ++  ++V+F    
Sbjct: 48  TLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGL-- 105

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   +F IF S V+ +  +    + +I R+    ++S        +  + VP 
Sbjct: 106 ------GEGPTVFLIFMSAVFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPG 159

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MPG +  + +++  GW  V+ +E I          G G Y+ +  +++   + LY+++ 
Sbjct: 160 AMPGFLTGLRLAVGAGWMSVICAEFIATNK------GFG-YLLIEAQQRLQTSKLYSLMI 212

Query: 248 MLGVIFLY-DQ---LLFRPMIVWSNKFRLERT 275
           M  ++ L+ DQ   LL R +  W  +FR  +T
Sbjct: 213 MSALVGLFIDQLIRLLERKLTGW--RFRNGKT 242



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 9/165 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +++G  +  +T   VL  +    IT+ RV+     A++I   +G+ +G+       I P 
Sbjct: 27  ETMGEFLRDWTEPRVLLNL---GITLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPI 83

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFK 480
              +   P   + PL    + ++ L      ++ +IF +  + ++ N ++G S+   ++ 
Sbjct: 84  VNSIRQVPIMAWVPL---SIVWFGLGEGP--TVFLIFMSAVFPLILNTVSGVSSIDRNYI 138

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             A S        +R II+PG  P ++TG   A G  W + I +E
Sbjct: 139 NAAKSMGAGTAAIYRDIIVPGAMPGFLTGLRLAVGAGWMSVICAE 183


>gi|15800097|ref|NP_286109.1| taurine transporter subunit [Escherichia coli O157:H7 EDL933]
 gi|15829675|ref|NP_308448.1| taurine transporter subunit [Escherichia coli O157:H7 str. Sakai]
 gi|168749817|ref|ZP_02774839.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756896|ref|ZP_02781903.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761559|ref|ZP_02786566.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168768305|ref|ZP_02793312.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776340|ref|ZP_02801347.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783220|ref|ZP_02808227.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786200|ref|ZP_02811207.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168800237|ref|ZP_02825244.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195938570|ref|ZP_03083952.1| taurine transporter subunit [Escherichia coli O157:H7 str. EC4024]
 gi|208806945|ref|ZP_03249282.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815515|ref|ZP_03256694.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208823125|ref|ZP_03263443.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398897|ref|YP_002269008.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|218703651|ref|YP_002411170.1| taurine transporter subunit [Escherichia coli UMN026]
 gi|254791547|ref|YP_003076384.1| taurine transporter subunit [Escherichia coli O157:H7 str. TW14359]
 gi|261223846|ref|ZP_05938127.1| taurine transporter subunit, membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256054|ref|ZP_05948587.1| taurine transporter subunit, membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291281274|ref|YP_003498092.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           [Escherichia coli O55:H7 str. CB9615]
 gi|293403487|ref|ZP_06647578.1| taurine transporter subunit [Escherichia coli FVEC1412]
 gi|298379098|ref|ZP_06988979.1| taurine transporter subunit [Escherichia coli FVEC1302]
 gi|300900424|ref|ZP_07118594.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|12513208|gb|AAG54717.1|AE005216_5 taurine transport system permease protein [Escherichia coli O157:H7
           str. EDL933]
 gi|13359878|dbj|BAB33844.1| taurine transport system permease protein [Escherichia coli O157:H7
           str. Sakai]
 gi|187768289|gb|EDU32133.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015903|gb|EDU54025.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999409|gb|EDU68395.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189355970|gb|EDU74389.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362454|gb|EDU80873.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368092|gb|EDU86508.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373670|gb|EDU92086.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189377398|gb|EDU95814.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208726746|gb|EDZ76347.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732163|gb|EDZ80851.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208737318|gb|EDZ85002.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160297|gb|ACI37730.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209744494|gb|ACI70554.1| taurine transport system permease protein [Escherichia coli]
 gi|209744496|gb|ACI70555.1| taurine transport system permease protein [Escherichia coli]
 gi|209744498|gb|ACI70556.1| taurine transport system permease protein [Escherichia coli]
 gi|209744500|gb|ACI70557.1| taurine transport system permease protein [Escherichia coli]
 gi|209744502|gb|ACI70558.1| taurine transport system permease protein [Escherichia coli]
 gi|218430748|emb|CAR11622.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|254590947|gb|ACT70308.1| taurine transporter subunit, membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|284920175|emb|CBG33234.1| taurine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761147|gb|ADD55108.1| ABC-type nitrate/sulfonate/bicarbonate transpo rt system, permease
           component [Escherichia coli O55:H7 str. CB9615]
 gi|291429340|gb|EFF02360.1| taurine transporter subunit [Escherichia coli FVEC1412]
 gi|298280211|gb|EFI21715.1| taurine transporter subunit [Escherichia coli FVEC1302]
 gi|300356070|gb|EFJ71940.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|320192777|gb|EFW67417.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. EC1212]
 gi|320638358|gb|EFX08072.1| taurine transporter subunit [Escherichia coli O157:H7 str. G5101]
 gi|320643739|gb|EFX12862.1| taurine transporter subunit [Escherichia coli O157:H- str. 493-89]
 gi|320649089|gb|EFX17667.1| taurine transporter subunit [Escherichia coli O157:H- str. H 2687]
 gi|320655982|gb|EFX23898.1| taurine transporter subunit [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320662539|gb|EFX29928.1| taurine transporter subunit [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665109|gb|EFX32202.1| taurine transporter subunit [Escherichia coli O157:H7 str. LSU-61]
 gi|326341125|gb|EGD64917.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. 1044]
 gi|326346100|gb|EGD69839.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. 1125]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|290509885|ref|ZP_06549256.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|289779279|gb|EFD87276.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 522

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  IP LG++   +V F     G   G +LA I     + V  M  +  Q++ ++
Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMIINTQQAVASV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P+ L E  R    S WQ+  +L +P S+PG    + +++S  W  ++  E++   + +
Sbjct: 158 PQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R G +  P L++++ I +  +L     +  N   GK++   LA+ F +F        FS 
Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            Q++      L+EV+R  RL  + +   + +P + PG+   + +++   W   + +E  +
Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                    GIGS +  A +  D+  IL  M+
Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493



 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G   G  P  + +++P    LA  P   + PL++     + ++  L L+++ +  T   
Sbjct: 90  LGALFGLVPAAAQRVEPLFYALAQIPTLGWIPLLMVL---FGIDNGLKLAVI-VKTTVVP 145

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++ N     ++ P    E     + + W+  R++++P   P + TG   A   AW + IV
Sbjct: 146 MIINTQQAVASVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIV 205

Query: 524 SEV 526
            E+
Sbjct: 206 VEL 208


>gi|152971536|ref|YP_001336645.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150956385|gb|ABR78415.1| glycine/betaine/proline transport protein (ABC superfamily,
           membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 355

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|332853874|ref|ZP_08435033.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332865984|ref|ZP_08436752.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|332728355|gb|EGJ59734.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332734914|gb|EGJ66001.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 284

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 42/226 (18%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++  +     + +  ++   +  R++   V++ L       LA + ++L   L+P L
Sbjct: 68  PLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 127

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++++ IP + ++   ++ F +        +E + IF  F   ++ +  +    +  +   
Sbjct: 128 EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 179

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L   ++S   S     + + +P ++P ++  + + M   WF +V +EMI          G
Sbjct: 180 LVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 233

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           IG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 234 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|227326127|ref|ZP_03830151.1| nitrate transporter permease component [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 305

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 144 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 195

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 196 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 255

Query: 216 G 216
           G
Sbjct: 256 G 256



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP G  IG    +++ + P   LL       + P  +  
Sbjct: 111 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 168

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ +   R I+LP
Sbjct: 169 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 226

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + P  +TG   + G AW   + +E+ + G
Sbjct: 227 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 256


>gi|225414562|ref|ZP_03761751.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme
           DSM 15981]
 gi|225041918|gb|EEG52164.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme
           DSM 15981]
          Length = 266

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  +    + ++   L EV+ ++R+   +  + + VP S+P ++  + + MS  W  V
Sbjct: 143 WPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGLRLGMSNAWMSV 202

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY-DQLLFRPMIVW 266
           VA+EMI          GIG  I L+ +E     ++Y  + ++GVI L+ D+ L R     
Sbjct: 203 VAAEMIASST------GIGYLITLS-RETANARVMYMCVLVIGVIGLFIDRGLTR----- 250

Query: 267 SNKFRLERTTGIYPAD 282
              + L +T GI  + 
Sbjct: 251 LEHYYLAKTRGITDSK 266



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 8/131 (6%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++ FG+ W +L N + G  +  N   EVA ++ I   +    II+P   P  +TG     
Sbjct: 136 IIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGLRLGM 195

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573
             AW + + +E+ +       +TG+G  I  S E  +   + + VL++    L ++R L 
Sbjct: 196 SNAWMSVVAAEMIA------SSTGIGYLITLSRETANARVMYMCVLVIGVIGLFIDRGLT 249

Query: 574 -WHPLYLYGTR 583
                YL  TR
Sbjct: 250 RLEHYYLAKTR 260


>gi|188534247|ref|YP_001908044.1| Aliphatic sulfonates transport permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029289|emb|CAO97166.1| Aliphatic sulfonates transport permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 263

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + ++++IP L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 VQMLRNIPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLIEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TLIVAETISASS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +     LL R  + W   ++L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SALLLERVWLRWHPAYQLKEET 262



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R V+   I   I + +G+  G        +    Q+L   P     PLV+    +
Sbjct: 63  AISSWRAVIGFSIGGSIGLVLGLITGVSKLGERLLDTSVQMLRNIPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYINTWHGIRNIDRGLIEMARSYGLSGWSLFIQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G Y+A +  +    +VV+  +I+ 
Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 564 CFV--------LALNR--FLWHPLY 578
             +        L L R    WHP Y
Sbjct: 232 ALLGKLADVSALLLERVWLRWHPAY 256


>gi|325121890|gb|ADY81413.1| taurine transporter subunit [Acinetobacter calcoaceticus PHEA-2]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQTQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|227821372|ref|YP_002825342.1| hypothetical amino acid ABC-transporter ATP-binding protein
           [Sinorhizobium fredii NGR234]
 gi|227340371|gb|ACP24589.1| hypothetical amino acid ABC-transporter ATP-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 25/187 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+S+        + ++S R+  ++ P+LD+MQ++P   +L   V   M L  GKV G   
Sbjct: 112 VLSIAVGIPLGIIMSRSDRVQNIINPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168

Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191
             I+AI    ++ N+   +      + +D+ E + +F  S WQK   + +P ++P    G
Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAG 222

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +MM+++          M+V+  ++I + G+G  +  AI  Q     ++  L ++G+
Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 272 AIIFDRV 278


>gi|184157803|ref|YP_001846142.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332876491|ref|ZP_08444258.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209397|gb|ACC56795.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|322508118|gb|ADX03572.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323517692|gb|ADX92073.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332735349|gb|EGJ66409.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|298375042|ref|ZP_06984999.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|298267542|gb|EFI09198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
          Length = 274

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++LL         A S R   +L P+LD MQ++P   +L   V++
Sbjct: 83  EETMQTLALVLSSTGMALLLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLF 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V GA    IFA+    V  +T      L  +P+++ E +RSF  +  Q  + 
Sbjct: 143 F---GLGTVPGAFATIIFAL--PPVARLT---ALGLRQVPKNVVEAARSFGATPSQLLFK 194

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + +P ++P    G+   +MMS+S     VV + MI  G       G+G  + + I +  +
Sbjct: 195 VELPLALPTILAGINQTIMMSLS----MVVVAAMISAG-------GLGEVVLIGITQMKI 243


>gi|145295416|ref|YP_001138237.1| hypothetical protein cgR_1353 [Corynebacterium glutamicum R]
 gi|140845336|dbj|BAF54335.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 260

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 12/150 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  L A +I L   F    L  +S  +   + P++ +++ +  L +L   +    + 
Sbjct: 76  RVLLGFLVAAIIPLPVGF----LLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGLALLKD- 130

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  AE  A+F I  S +W +  +   ++ N+      ++ +     W +  Y+ +P
Sbjct: 131 -------AENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIYIWLP 183

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            S+PG++  + +S+S  W  +V +EM+V G
Sbjct: 184 ASLPGIITGLRLSLSTAWLVIVVAEMLVGG 213



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 7/157 (4%)

Query: 373 YQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV++  ++A+II +PVG  +G    I   + P  Q+L    
Sbjct: 57  YQDAPASVGIFWHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVS 116

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + PL ++ +     N  +    +++    W IL N I         +  +A +    
Sbjct: 117 PLAWLPLGLALLKDAE-NTAM---FVIVLSALWPILINTIDAVRNVNPTYINLADTIGTP 172

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            W    YI LP   P  +TG   +   AW   +V+E+
Sbjct: 173 WWSRIIYIWLPASLPGIITGLRLSLSTAWLVIVVAEM 209


>gi|293608377|ref|ZP_06690680.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|299770528|ref|YP_003732554.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
 gi|292828950|gb|EFF87312.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|298700616|gb|ADI91181.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQAQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|118588253|ref|ZP_01545662.1| probable amino acid ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
 gi|118438959|gb|EAV45591.1| probable amino acid ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
          Length = 294

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 29/200 (14%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R ++ + +  L   V       + A+S R+   + PILD+MQ++P   +L   V+ 
Sbjct: 97  EDTMRTVAMVTVCTLLAIVLGMPIGIVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMI 156

Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F     GKV G     I+AI    ++ N+   +  +      D+ E + +F  S  QK  
Sbjct: 157 F---GIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDT------DVLEAADAFGSSARQKLM 207

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+   +MMS+S          M+VV  ++I + G+G  + +AI  Q 
Sbjct: 208 NVQLPLALPTIMAGINQCIMMSLS----------MVVVA-SMIGVRGLGQEVLVAINNQY 256

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
           L A + + L+++ +  ++D+
Sbjct: 257 LTAGMLSGLSIVAIAIIFDR 276


>gi|152984113|ref|YP_001351148.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959271|gb|ABR81296.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A  IS+L       LAA+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|33591062|gb|AAQ23045.1| NrtB [Cyanothece sp. PCC 8801]
          Length = 108

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D+K VA    ++G++++  I+ P   PY  TG     G +W A + +E+   G     
Sbjct: 3   PKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGG----- 57

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I +S      PE+++ ++ +    L L+R +
Sbjct: 58  -VGIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D + V++  RLSG++ FW +  P ++P +   + + +   W  +VA+EM+V G   
Sbjct: 1   QIPKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGG--- 57

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  +     L  I+ A++ +  V  + D+L+
Sbjct: 58  ---VGIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94


>gi|15964788|ref|NP_385141.1| putative permease protein [Sinorhizobium meliloti 1021]
 gi|307309676|ref|ZP_07589328.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307319473|ref|ZP_07598900.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15073966|emb|CAC45607.1| Probable glycine betaine ABC transporter, permease [Sinorhizobium
           meliloti 1021]
 gi|306894845|gb|EFN25604.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306899888|gb|EFN30511.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 25/187 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+S+        + ++S R   ++ P+LD+MQ++P   +L   V   M L  GKV G   
Sbjct: 112 VLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168

Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191
             I+AI    ++ N+   +      + +D+ E + +F  S WQK   + +P ++P    G
Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAG 222

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +MM+++          M+V+  ++I + G+G  +  AI  Q     ++  L ++G+
Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 272 AIIFDRV 278


>gi|227893677|ref|ZP_04011482.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
 gi|227864537|gb|EEJ71958.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
          Length = 210

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +IIA +I +PVG        +++  + FAQ+L   P+     +++  +    + P L   
Sbjct: 31  LIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALLFILIPFIGT-GIGPALIAL 89

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++       ++ N I G +  P D +EV  S  ++ W+  + I LP   P+ + G   A
Sbjct: 90  VVLALPP---LVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISLPLALPFILNGIKLA 146

Query: 514 CGGA-WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 +AS+ + + + G   L  TGLG Y  +    G     +L +L M  F L + +
Sbjct: 147 LVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVIIGGVSVALLSLLAMFIFDLIIKK 205



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S+++I+L+       L +K+R +         I++ IP L  L F ++ F+    G  IG
Sbjct: 29  SSLIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALL-FILIPFI----GTGIG 83

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               A+ A+    +  +  +       +P DLEEV  S  +S WQ    + +P ++P
Sbjct: 84  P---ALIALVVLALPPLVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISLPLALP 137


>gi|226952054|ref|ZP_03822518.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC
           27244]
 gi|226837211|gb|EEH69594.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC
           27244]
          Length = 293

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A+V ++            ++ +  VL P++++++ IP L +L   V++
Sbjct: 96  QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E   +  IF S +  +  S    + +   + E  + S   S  Q FW+
Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VASE++
Sbjct: 208 VILPTALPHILTGIRIGLGVGWSTLVASELV 238


>gi|226944292|ref|YP_002799365.1| ABC transporter inner membrane permease [Azotobacter vinelandii DJ]
 gi|226719219|gb|ACO78390.1| ABC transporter, inner membrane permease component [Azotobacter
           vinelandii DJ]
          Length = 273

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 22/185 (11%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A +RRL   L P+L+  +++P +  +  T+VYF        IG E A I  +  +  +  
Sbjct: 107 AGARRL---LTPLLNFFRALPPIALIPLTIVYFG-------IG-EAAKILVLVYAAFFTA 155

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +Y+ +  I      V+R+   S  + F  + +P ++P ++    +++  GW  +VAS
Sbjct: 156 VVVLYEGISRIAPIYVNVARTLGASERELFLRVVLPLALPHVLTATRVALGVGWMTLVAS 215

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML----TMLGVIFLYDQLLFRPMIVW 266
           E++   +      G+GS I +A     L  I   ++    T + + FL  +L  R ++ W
Sbjct: 216 ELVSAQN------GLGSMIQVAASYFQLEVIYLGLICIGFTAMAMDFLLVRLSAR-LVGW 268

Query: 267 SNKFR 271
             + +
Sbjct: 269 QERVK 273


>gi|325521537|gb|EGD00340.1| putative binding-protein-dependent transport system protein
           [Burkholderia sp. TJI49]
          Length = 238

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 10/146 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGF 115
              L  YA R  L +  +MV++++       L ++ R  R     + + +I  +IP L  
Sbjct: 35  ADDLTYYAGRHMLLVGYSMVLAIVVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAV 94

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F        IG ++ AI A+F + +  +T + Y+ + N+P  L E ++   ++
Sbjct: 95  LAIALGIFG-------IG-DVPAIVALFLASLLPITRNTYEGVKNVPAALREAAKGIGMT 146

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMS 201
           GWQ    + +P ++P +V  +  +++
Sbjct: 147 GWQSLLRVELPNALPIIVGGVRTALA 172


>gi|331661741|ref|ZP_08362664.1| taurine transport system permease protein TauC [Escherichia coli
           TA143]
 gi|331060163|gb|EGI32127.1| taurine transport system permease protein TauC [Escherichia coli
           TA143]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|293413621|ref|ZP_06656270.1| taurine transporter subunit [Escherichia coli B185]
 gi|291433679|gb|EFF06652.1| taurine transporter subunit [Escherichia coli B185]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|289650725|ref|ZP_06482068.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|152981495|ref|YP_001352171.1| ABC-type nitrate transport system, permease component
           [Janthinobacterium sp. Marseille]
 gi|151281572|gb|ABR89982.1| ABC-type nitrate transport system, permease component
           [Janthinobacterium sp. Marseille]
          Length = 309

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 118 SLKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLP--IGLLVFKA 175

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +P    S+ +   + W ++ N   G    P D+  VA    ++ W+    I+ P + PY
Sbjct: 176 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKILFPSVLPY 233

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   A G AW   + +E+ + G
Sbjct: 234 MLTGVRLAIGTAWLVIVAAEMLTGG 258



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          A+ AAI++IF   +W M  +    +  +
Sbjct: 152 PIISLLKPVSPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRV 203

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V++  +LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 204 PQDYMNVAKVLKLSEWKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 258


>gi|84684440|ref|ZP_01012341.1| putative nitrate transporter [Maritimibacter alkaliphilus HTCC2654]
 gi|84667419|gb|EAQ13888.1| putative nitrate transporter [Rhodobacterales bacterium HTCC2654]
          Length = 361

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 16/187 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452
           +I S I IP+GI  G  P  ++ I P  Q+        + P+V   VS         L  
Sbjct: 165 LIGSAIAIPLGIVAGLSPIANAAINPIVQIFKPVSPLAWLPIVTMIVSALAAEGTDGLLP 224

Query: 453 ------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 ++ +   + W  L N   G S+   D   V+    +  W     ++LP   P  
Sbjct: 225 KSFIISAITVTLCSLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPSALPLI 284

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F 
Sbjct: 285 FTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFT 336

Query: 567 LALNRFL 573
           + +  FL
Sbjct: 337 IGIIGFL 343



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 9/118 (7%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW 
Sbjct: 238 SLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 297

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+ T+  + FL D+++F
Sbjct: 298 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMF 349


>gi|188494237|ref|ZP_03001507.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300916138|ref|ZP_07132905.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|188489436|gb|EDU64539.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300416557|gb|EFJ99867.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|332341730|gb|AEE55064.1| taurine transporter protein subunit TauC [Escherichia coli UMNK88]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L +L+A+VI +            S  +  +L PI+++ + +P L +L   V++F  
Sbjct: 85  TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 139

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG E + I  I+ +    +  S    + +  +     +RS   S  Q  W++ +
Sbjct: 140 ------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVIL 192

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P ++P ++  + + +  GW  +VA+E+I
Sbjct: 193 PGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|294651139|ref|ZP_06728474.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292822971|gb|EFF81839.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 293

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A+V ++            ++ +  VL P++++++ IP L +L   V++
Sbjct: 96  QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E   +  IF S +  +  S    + +   + E  + S   S  Q FW+
Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VASE++
Sbjct: 208 VILPTALPHILTGIRIGLGVGWSTLVASELV 238


>gi|294085667|ref|YP_003552427.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665242|gb|ADE40343.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+ +   IA+ + +P+G+++G+   +     P  +L    P   + PL +  +  +   P
Sbjct: 101 RIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILLLPGFE-GP 159

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            ++L+ L    + +    N + G  +  +D+   A     + W  ++ +++PG  P+  T
Sbjct: 160 VIFLATL---ASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALPFIFT 216

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           G   + G AW + + +E+ S G + L    + AY+   T
Sbjct: 217 GLQISIGVAWFSLVAAEMVS-GDLGLGYLIVDAYMNNVT 254



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR++     P+L++ + IPIL ++  +++    L PG     E   IF    + ++  T 
Sbjct: 123 SRKVRDFAFPLLELFRPIPILAWVPLSIL----LLPG----FEGPVIFLATLASLFVTTL 174

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + +I  D    +     S W  F  + VP ++P +   + +S+   WF +VA+EM
Sbjct: 175 NAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALPFIFTGLQISIGVAWFSLVAAEM 234

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            V GD      G+G  I  A      + ++  M+T+
Sbjct: 235 -VSGDL-----GLGYLIVDAYMNNVTVPMVIGMITL 264


>gi|296132038|ref|YP_003639285.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296030616|gb|ADG81384.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 256

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++ +VIS++ T + +TLA   R +   +   + +M  +P +  L   +++F        
Sbjct: 63  IITGLVISVVLTVILSTLAILFRTVDDFINTAVAVMDPLPGIALLPLAILWFGT------ 116

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              + A IF I  S +W M  +       +P   +EV  +  L G +    + VP + P 
Sbjct: 117 --GQKAIIFIIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPRLVLGIMVPAAFPY 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + +  S  W  ++A+EM+    T     G+G YI       D+  +  A++ ++ +
Sbjct: 175 LLTGVKIGWSRAWRALIAAEMVF--GTAGVSGGLGWYIYQQRYLMDISGVFAALVAIVII 232

Query: 252 IFLYDQLLF 260
             L + LLF
Sbjct: 233 GILVEDLLF 241



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++  T W ++ N + G    P  +KEV  +  + G R    I++P  FPY +TG     
Sbjct: 124 IIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPRLVLGIMVPAAFPYLLTGVKIGW 183

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             AW A I +E+  +G   + + GLG YI + 
Sbjct: 184 SRAWRALIAAEMV-FGTAGV-SGGLGWYIYQQ 213


>gi|257483860|ref|ZP_05637901.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330891839|gb|EGH24500.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330987240|gb|EGH85343.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|260550615|ref|ZP_05824824.1| taurine transporter [Acinetobacter sp. RUH2624]
 gi|260406326|gb|EEW99809.1| taurine transporter [Acinetobacter sp. RUH2624]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|91209432|ref|YP_539418.1| taurine transporter subunit [Escherichia coli UTI89]
 gi|117622634|ref|YP_851547.1| taurine transporter subunit [Escherichia coli APEC O1]
 gi|218557280|ref|YP_002390193.1| taurine transporter subunit [Escherichia coli S88]
 gi|237707643|ref|ZP_04538124.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|91071006|gb|ABE05887.1| taurine transport system permease protein TauC [Escherichia coli
           UTI89]
 gi|115511758|gb|ABI99832.1| taurine transport system permease protein TauC [Escherichia coli
           APEC O1]
 gi|218364049|emb|CAR01714.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|226898853|gb|EEH85112.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|294490726|gb|ADE89482.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|307628162|gb|ADN72466.1| taurine transporter subunit [Escherichia coli UM146]
 gi|315289831|gb|EFU49221.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299597|gb|EFU58845.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|323953018|gb|EGB48886.1| inner membrane transport system [Escherichia coli H252]
 gi|323958561|gb|EGB54264.1| inner membrane transport system [Escherichia coli H263]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|238063035|ref|ZP_04607744.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC
           39149]
 gi|237884846|gb|EEP73674.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC
           39149]
          Length = 264

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 17/123 (13%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +AI  IF + +W    +       IPRD   V+  F+       W++ +P ++P ++  +
Sbjct: 134 SAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNALPSIITGL 193

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIG-----SYIALAIKEQDLLAILYAMLTMLGV 251
            +SM  GW  +VA EM+  G++     GIG     SY AL + +      + A + ++GV
Sbjct: 194 RLSMGIGWMVIVAVEML-QGNS-----GIGYFVWNSYNALELDK------VVAAIVLIGV 241

Query: 252 IFL 254
           I L
Sbjct: 242 IGL 244



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV +   +A+++ I +G+ +G    + S + P  Q+L       +FP     +  Y
Sbjct: 72  ISLRRVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFP-----IWLY 126

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +      ++++IF T  W  L N  AGA A P D + VA  F      +  ++++P   
Sbjct: 127 IIEEPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNAL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G  W   +  E+          +G+G ++  S       +VV  ++++ 
Sbjct: 187 PSIITGLRLSMGIGWMVIVAVEMLQ------GNSGIGYFVWNSYNALELDKVVAAIVLIG 240

Query: 564 CFVLALNRFL 573
              L L+  L
Sbjct: 241 VIGLVLDAIL 250


>gi|28872384|ref|NP_795003.1| histidine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213971438|ref|ZP_03399551.1| histidine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382155|ref|ZP_07230573.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato Max13]
 gi|302060092|ref|ZP_07251633.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato K40]
 gi|302132378|ref|ZP_07258368.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855639|gb|AAO58698.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213923799|gb|EEB57381.1| histidine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|330874123|gb|EGH08272.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965521|gb|EGH65781.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017887|gb|EGH97943.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|26986974|ref|NP_742399.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24981588|gb|AAN65863.1|AE016214_8 taurine ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 279

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 87  SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   T  +  R++ILP   P 
Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256

Query: 566 VLALNRFL 573
             AL   L
Sbjct: 257 AFALEMSL 264


>gi|239503534|ref|ZP_04662844.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB900]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|163734362|ref|ZP_02141802.1| nitrate ABC transporter, permease component [Roseobacter litoralis
           Och 149]
 gi|161392370|gb|EDQ16699.1| nitrate ABC transporter, permease component [Roseobacter litoralis
           Och 149]
          Length = 357

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452
           +IASI+ IP+GI  G     ++ + P  Q+        + P+V   VS  +   + W   
Sbjct: 162 MIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221

Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                ++ +   + W  L N   G S+   D   V+    +  +     ++LP   P   
Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   + G  W   I +E+ +      +  GLG ++ +  + GS     L  +++  F +
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333

Query: 568 ALNRFL 573
            +  FL
Sbjct: 334 GIIGFL 339



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VSR  +++ + K   L +P ++P +   + +S+  GW 
Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+ T+  + FL D++++  
Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347

Query: 261 RPMIVWSNK 269
           + M  +SN 
Sbjct: 348 QSMFTFSNN 356


>gi|157371969|ref|YP_001479958.1| glycine betaine transporter membrane protein [Serratia
           proteamaculans 568]
 gi|157323733|gb|ABV42830.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 374

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+  G V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 189 ARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 243

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 244 TI---LGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 296

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 297 VVIASMIAVG-------GLGQMVLRGIGRLDM 321


>gi|332529142|ref|ZP_08405106.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332041365|gb|EGI77727.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 298

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P DI   + +      L  + + ++ R+ +   I  +   V  T+   SRR   +L P 
Sbjct: 77  APSDIARTL-LAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGEALLDPT 135

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       KV+   +   F ++          +     ++ R
Sbjct: 136 FQALRAIPSLAWVPLLLLWLGIDEASKVVLIAIGGFFPVY--------MGVASGFRDVDR 187

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L EV+R +RL   +    + +P ++P ++  +   +S  W F+VA+E+I  
Sbjct: 188 KLVEVARMYRLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIAA 239


>gi|86749954|ref|YP_486450.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86572982|gb|ABD07539.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 266

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A+++ IP+G+ IG  P + + + P   LL   P   + PL    + ++ L P   +  L
Sbjct: 83  LAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 138

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + IL N I G  +      E A      G + +R ++LP   P    G      
Sbjct: 139 VFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQLFRAVVLPAALPSIFNGLRLGAS 198

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            AW   +V E+           GLGA I + 
Sbjct: 199 FAWILIVVGEMTG------VPEGLGAVIMDG 223


>gi|331012049|gb|EGH92105.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|317494363|ref|ZP_07952777.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917613|gb|EFV38958.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 282

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ ++ A +I +PVGI +G  P +   + P  ++    P   + PL++       
Sbjct: 90  SLSRILIALLAAVVIGVPVGIAMGLNPTVRGILDPIIEIYRPVPPLAYLPLMIIWFGIGE 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +     AG  +        A +   + W+   Y++LP   P 
Sbjct: 150 TS-KILLIYLAIFAP---VTLAAAAGVRSVEQVRVRAAQALGASRWQVLWYVVLPNALPE 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  I  + E  +   V+ G+ ++   
Sbjct: 206 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMIQSAGEFLATDVVIAGISVIAFI 259

Query: 566 VLALN 570
             AL 
Sbjct: 260 AFALE 264



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L PI++I + +P L +L   +++F        IG E + I  I+ +    +T +    +
Sbjct: 121 ILDPIIEIYRPVPPLAYLPLMIIWFG-------IG-ETSKILLIYLAIFAPVTLAAAAGV 172

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +++   S WQ  WY+ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 173 RSVEQVRVRAAQALGASRWQVLWYVVLPNALPEILTGLRIGLGVGWSTLVAAELI 227


>gi|206974538|ref|ZP_03235454.1| taurine ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217960446|ref|YP_002339008.1| taurine ABC transporter, permease protein [Bacillus cereus AH187]
 gi|222096497|ref|YP_002530554.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter , permease [Bacillus cereus Q1]
 gi|229139641|ref|ZP_04268211.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
 gi|206747181|gb|EDZ58572.1| taurine ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217063782|gb|ACJ78032.1| taurine ABC transporter, permease protein [Bacillus cereus AH187]
 gi|221240555|gb|ACM13265.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus Q1]
 gi|228643772|gb|EEL00034.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
          Length = 274

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I++G ++  RV+   I+ +++ IPVG+ IG  P + +   P    +   P   F  L   
Sbjct: 76  IYIG-VSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITL--- 131

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + ++ +     + L+M + T + +  N I G  A   D    A S   + W+   ++I+
Sbjct: 132 FMLWFGIGEQSKIFLIM-YATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVII 190

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVAS 528
           P   PY  TGA  A G ++ A + +E+ +
Sbjct: 191 PAALPYIYTGAKLAMGSSFMAIVGAEMVA 219



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  Y   + LR+++  ++  L       L  +   L  +  P+++ ++ IP L F+T  
Sbjct: 73  SLFIYIGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLF 132

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F        IG E + IF I  +  + +T +    +  +  D    +RS   S WQ 
Sbjct: 133 MLWFG-------IG-EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQI 184

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +++ +P ++P +     ++M   +  +V +EM+   + +
Sbjct: 185 MFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 224


>gi|294665704|ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604546|gb|EFF47922.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  + PL++       
Sbjct: 79  SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       L+  G  + +   V++G         E+  S+ ++  R  R I+
Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E  S P++V+G
Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +++   +  L+  L   +    +R LR
Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265


>gi|283833775|ref|ZP_06353516.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070436|gb|EFE08545.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 263

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I          ++  SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISSWRALVGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + +  + NI R L E++RS+ LSG+  F +
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFSLFIH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
               ILYA+L  L  +    QLL R  + W+  + ++  T
Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWNPAYHVKEAT 262


>gi|237802267|ref|ZP_04590728.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025124|gb|EGI05180.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|171320773|ref|ZP_02909781.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171093965|gb|EDT39078.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|330961928|gb|EGH62188.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|298489261|ref|ZP_07007278.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156225|gb|EFH97328.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|187924081|ref|YP_001895723.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187715275|gb|ACD16499.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 286

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L EV+R F  SGWQ+  YL +P ++P L   + ++ +  W  +V 
Sbjct: 166 VTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 225

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 226 VELVASSE 233



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  + + G    P    EVA  F  +GW+   Y++LP   P   TG   A   AW A +V
Sbjct: 166 VTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 225

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E+ +       + GLG  I    +      V+  V+++     A+NR L
Sbjct: 226 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 269


>gi|331019006|gb|EGH99062.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 284

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 7/124 (5%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +AIF IF   VW M  +    +  + ++   V+R   +S  +K + + +P + P ++  M
Sbjct: 157 SAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVILPAAAPTIITGM 216

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +SM   W  +VA+EM++ G       GIG ++        L  +++A+L M+GVI +  
Sbjct: 217 RISMGIAWLVIVAAEMLIGGT------GIGYFVWNQWNNLSLGNVIFAVL-MIGVIGMLL 269

Query: 257 QLLF 260
            L+F
Sbjct: 270 DLMF 273



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP+G  IG  P +   + PF Q+L         PL    ++ Y 
Sbjct: 96  SLGRVGAGYFLAALVAIPLGFLIGMSPLLYRALDPFIQVLKPIS-----PLAWMPIALYT 150

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +   ++ +IF  + W +L N   G +    ++  VA    ++  R    +ILP   P
Sbjct: 151 IKDSTTSAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVILPAAAP 210

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   V+  VL++  
Sbjct: 211 TIITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNQWNNLSLGNVIFAVLMIGV 264

Query: 565 FVLALN 570
             + L+
Sbjct: 265 IGMLLD 270


>gi|264676723|ref|YP_003276629.1| nitrate ABC transporter inner membrane subunit [Comamonas
           testosteroni CNB-2]
 gi|262207235|gb|ACY31333.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni CNB-2]
          Length = 330

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP    ++  IF  + W ++ N   G    P D+  VA   +++ W+    I+ P + P
Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   A G AW   + +E+ + G
Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279


>gi|229197192|ref|ZP_04323926.1| ABC transporter, permease protein [Bacillus cereus m1293]
 gi|228586305|gb|EEK44389.1| ABC transporter, permease protein [Bacillus cereus m1293]
          Length = 272

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  RV+   I+ +++ IPVG+ IG  P + +   P    +   P   F  L    + ++
Sbjct: 78  VSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITL---FMLWF 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     + L+M + T + +  N I G  A   D    A S   + W+   ++I+P   P
Sbjct: 135 GIGEQSKIFLIM-YATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALP 193

Query: 505 YYVTGAITACGGAWNASIVSEVAS 528
           Y  TGA  A G ++ A + +E+ +
Sbjct: 194 YIYTGAKLAMGSSFMAIVGAEMVA 217



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  Y   + LR+++  ++  L       L  +   L  +  P+++ ++ IP L F+T  
Sbjct: 71  SLFIYIGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLF 130

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F        IG E + IF I  +  + +T +    +  +  D    +RS   S WQ 
Sbjct: 131 MLWFG-------IG-EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQI 182

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +++ +P ++P +     ++M   +  +V +EM+   + +
Sbjct: 183 MFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 222


>gi|330901731|gb|EGH33150.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 232

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 43  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 99

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 100 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 154

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 155 LAMPSIMAGINQTTMMALS----MVVIASMI 181


>gi|319794068|ref|YP_004155708.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315596531|gb|ADU37597.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+++V  ++       L A S R   V+ P+LD MQ+ P   +L   V+ F     G V 
Sbjct: 170 LTSLVFCMVIGLPLGVLLASSDRAQRVMRPVLDAMQTTPAFVYLVPVVMLF---GIGNVP 226

Query: 133 GAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           G  +  IFA+    ++ N+       L  +  DL E +R++  S WQ    + +P +MP 
Sbjct: 227 GVIVTIIFALAPLVRLTNL------GLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 280

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 281 IMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 320


>gi|297171174|gb|ADI22183.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF0200_34B07]
 gi|297171298|gb|ADI22304.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured actinobacterium HF0200_46I24]
          Length = 681

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL M L ++ +++   F  A  A KSRR+  ++ P LD+MQ++P   +L   ++ F 
Sbjct: 116 SMNTLGMVLVSIPLAIGVGFGMAVAAYKSRRINAIIQPTLDLMQTVPTFAYLIPILLLFG 175

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V+G   +AI+A        M  +M   L  +P ++ E       +  Q+FW++ 
Sbjct: 176 F---GPVVGVVASAIYACPP-----MARNMILGLQKVPPEVLEAGLMSGSTRRQQFWWVR 227

Query: 185 VPFSMPGLV 193
           VP ++P ++
Sbjct: 228 VPSALPNIM 236


>gi|170700313|ref|ZP_02891326.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170134800|gb|EDT03115.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|313496595|gb|ADR57961.1| TauC [Pseudomonas putida BIRD-1]
          Length = 279

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 87  SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   T  +  R++ILP   P 
Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256

Query: 566 VLALNRFL 573
             AL   L
Sbjct: 257 AFALEMSL 264


>gi|299529543|ref|ZP_07042980.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
 gi|298722406|gb|EFI63326.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
          Length = 330

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP    ++  IF  + W ++ N   G    P D+  VA   +++ W+    I+ P + P
Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   A G AW   + +E+ + G
Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279


>gi|160895595|ref|YP_001561177.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160361179|gb|ABX32792.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 296

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 21/203 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   I+AS++ +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 105 MTVWRVMGGFILASVVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 164

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I   V         D  E A +   +     R +++PG  
Sbjct: 165 ETQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRRVLIPGAA 219

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 220 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 273

Query: 564 CFVL-------ALNR--FLWHPL 577
              L       +LNR  F W  L
Sbjct: 274 LIGLVSDFIFKSLNRRMFEWSTL 296


>gi|297618911|ref|YP_003707016.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377888|gb|ADI36043.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
          Length = 253

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+   ++A  + +P+GI +G+   ++     F +LL   P   + PL ++     
Sbjct: 59  ISITRVLTGFLVAFAVAVPLGIMMGYYKPVNDIFDTFMELLRPIPPLAWVPLTLAWFGVG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +  ++  G  + IL N +AG    PN   E + +   TG    R +I+P   P
Sbjct: 119 STS----IIFIIFIGAFFPILINTVAGVKEVPNILVEASKTLGCTGINVLRKVIIPAASP 174

Query: 505 YYVTGAITACGGAWNASIVSE 525
             +TG     G AW   + +E
Sbjct: 175 SILTGLRVGAGIAWMCVVAAE 195


>gi|66048054|ref|YP_237895.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|289672073|ref|ZP_06492963.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|302188564|ref|ZP_07265237.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
 gi|63258761|gb|AAY39857.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330940565|gb|EGH43627.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330954740|gb|EGH55000.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
 gi|330972984|gb|EGH73050.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|330982273|gb|EGH80376.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|330875029|gb|EGH09178.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 282

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+ S  +I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       KV+   + A F ++ + V         ++  I R +
Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKM 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+I          G+
Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA------TKGL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
           G  ++   +      +L A++ +  +  L D LL    R  + W + F
Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    +I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 84  SLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  N +A          EV   +  + +R  R I+
Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRIL 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    AW   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245

Query: 559 VLIMCC 564
            +I+  
Sbjct: 246 AIIVLA 251


>gi|294146862|ref|YP_003559528.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
 gi|292677279|dbj|BAI98796.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
          Length = 272

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ + ++I +    +   +A  SR   + + P++ I ++IP L      +V+F      K
Sbjct: 81  RVAAGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGIGETPK 140

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V       +F ++         ++Y  + ++   L + ++SF LS W++ W++ +P ++P
Sbjct: 141 VALIAFGTVFPVY--------LNLYSGIRSVDLRLLDAAKSFGLSRWEQIWHVVLPSALP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            L+  +  ++S     +V +E I
Sbjct: 193 SLLVGLRYALSVAILVLVVAEQI 215


>gi|227824437|ref|ZP_03989269.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21]
 gi|226904936|gb|EEH90854.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21]
          Length = 286

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 23/200 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T   +L+A+  SLL       L A  +R   ++ P LD MQ++P   ++   V  
Sbjct: 95  QMMCETLSIVLAAVFFSLLIGLPIGVLLASIKRADPLIRPFLDAMQTMPTFVYMIPAV-- 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            M L PGKV       ++A+    V  +T      +  +  ++ E SRSF  S +Q    
Sbjct: 153 -MLLGPGKVPAVLATVVYAVVP--VIRLT---SHGIKQVDPEVVEASRSFGASRFQTLVK 206

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + +P ++P    G+   MMM+++           +VV  ++I   G+G  + +AI   + 
Sbjct: 207 VQIPQALPTIMTGINQTMMMAVA-----------MVVTSSMIGANGLGMEVLIAINRMES 255

Query: 239 LAILYAMLTMLGVIFLYDQL 258
              L A L+++ +  L D+L
Sbjct: 256 GRGLSAGLSIVIIAILLDRL 275


>gi|169796267|ref|YP_001714060.1| taurine ABC transporter membrane protein [Acinetobacter baumannii
           AYE]
 gi|213156998|ref|YP_002319043.1| taurine transport system permease protein [Acinetobacter baumannii
           AB0057]
 gi|215483722|ref|YP_002325945.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|301345497|ref|ZP_07226238.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB056]
 gi|301594987|ref|ZP_07239995.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB059]
 gi|332855398|ref|ZP_08435854.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332867256|ref|ZP_08437506.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|169149194|emb|CAM87074.1| Taurine transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213056158|gb|ACJ41060.1| taurine transport system permease protein [Acinetobacter baumannii
           AB0057]
 gi|213985797|gb|ACJ56096.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|332727488|gb|EGJ58915.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332734089|gb|EGJ65222.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 289

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V       
Sbjct: 97  SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   P+
Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++   
Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266

Query: 566 VLALNRFL 573
            ++   FL
Sbjct: 267 AVSFELFL 274



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++++++ IP L +L   V++F        IG E   +  IF S +  +  S    +
Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +   + E  + S   S  Q FW++ +P ++P ++  + + +  GW  +VA+E++
Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234


>gi|301025486|ref|ZP_07189033.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300396001|gb|EFJ79539.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|289624880|ref|ZP_06457834.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330869209|gb|EGH03918.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            +MP    G+    MM++S     VV + MI
Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232


>gi|34557298|ref|NP_907113.1| hypothetical protein WS0908 [Wolinella succinogenes DSM 1740]
 gi|34483014|emb|CAE10013.1| ABCB PROTEIN [Wolinella succinogenes]
          Length = 260

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 14/219 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P +  + + + L    + ++ S T  R L  ++ISL    +   LA   +   ++  PI+
Sbjct: 47  PLETFEKLTLLLGDPRIQEHLSLTLHRALKGLLISLALGSLLGFLAGLFKTASLLARPIV 106

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I+  IP + ++   +++F  L  G V+   + A F I       +     +    I  +
Sbjct: 107 TILVGIPPIAWIVLAMIWF-GLGEGTVLFTIIIASFPI-------VFVGALEGSRAIEGE 158

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +E+  +F LS  QK ++L +P     L  + + ++   W  V+ +E++   D      G
Sbjct: 159 SQEMCDAFSLSWIQKLFHLYIPHLFSYLFPSYIAALGMSWKIVIMAELLSSSD------G 212

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           IG+ +A+A    + +  L  +  M+G + + + L+  P+
Sbjct: 213 IGAELAIARSHLETITALALVCMMVGTLLIIEYLILEPI 251


>gi|319780587|ref|YP_004140063.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166475|gb|ADV10013.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 286

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV   ++ A ++ +PVG+ IG          P  + L   P   + PLVV       
Sbjct: 95  SLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPLVVIWFGIGE 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  L +++ M+      +  +  +G      +    A S   T  +  R++ILP   P 
Sbjct: 155 PSKILVITISMLA----PVALSTASGVRGVSQERINAARSLGATQRQVVRHVILPSALPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W+  + +E+ +       T GLG  I  + +      VV+G+L++   
Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMGILVIAAI 264

Query: 566 VLALN 570
              L 
Sbjct: 265 AFVLE 269



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L+ ++ IP L +L   V++F    P K        I  I  S +  +  S    +  +
Sbjct: 129 PLLEFLRPIPPLAYLPLVVIWFGIGEPSK--------ILVITISMLAPVALSTASGVRGV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++    +RS   +  Q   ++ +P ++P ++  + +++  GW  +VA+E++
Sbjct: 181 SQERINAARSLGATQRQVVRHVILPSALPAILTGLRIALGAGWSTLVAAELV 232


>gi|313650823|gb|EFS15224.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 2a str. 2457T]
          Length = 217

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 55  IQMLRNVPHLALIPLVILWFAIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 216


>gi|119476871|ref|ZP_01617152.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [marine gamma proteobacterium HTCC2143]
 gi|119449678|gb|EAW30915.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [marine gamma proteobacterium HTCC2143]
          Length = 337

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTT-LRMLSAMVISLLFTFVYATLAAK------ 92
           QE    + + D    T+ + S   Y  + T L  +   ++++ F F+ ATL A       
Sbjct: 96  QEVRNAKKLADDPSATVKIRS---YTGKATFLDQIFTSLLTVAFGFMVATLVAVPLGILC 152

Query: 93  --SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQV 147
             S  L   + PI+   + +  L +L    +    LY         A L + F +    +
Sbjct: 153 GLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALYVSDDPLFDKAFLTSAFTVALCCL 212

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W    +    + +I RDL  VSR  RL        + +P ++P +   + +S++ GW  +
Sbjct: 213 WPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVVIPSAIPLIFTGLRLSLATGWMVL 272

Query: 208 VASEMIVVGDTVIPLPGIGSYI 229
           +A+EM+         PG+G +I
Sbjct: 273 IAAEMLAQN------PGLGKFI 288



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 15/192 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449
           ++A+++ +P+GI  G    +   I P  Q         + PLV   VS  +++ +     
Sbjct: 139 MVATLVAVPLGILCGLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALYVSDDPLFDK 198

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L  +  +     W  + N I G ++   D   V+    +      R +++P   P   
Sbjct: 199 AFLTSAFTVALCCLWPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVVIPSAIPLIF 258

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   +    W   I +E+ +      +  GLG +I +  + GS     LG +++   V+
Sbjct: 259 TGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSNS--LGRIMVAVLVI 310

Query: 568 ALNRFLWHPLYL 579
            +  F+   L L
Sbjct: 311 GIIGFILDSLML 322


>gi|307947483|ref|ZP_07662816.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4]
 gi|307769301|gb|EFO28529.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4]
          Length = 282

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   ++ A V+ +         AA   +L  VL PILD+MQ+IP   +L   ++ 
Sbjct: 91  EETTETLALVIGASVVCMAVGVPIGVAAAHRPKLFSVLRPILDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +Q+          + + P+ L E   +F  +  Q  W
Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTQL---------GVSSTPKQLLEAGEAFGATKSQLLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KIELPYALPQIMAGLTQTIMLSLS 225


>gi|172065522|ref|YP_001816234.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171997764|gb|ACB68681.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 295

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|294626068|ref|ZP_06704676.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599604|gb|EFF43733.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 283

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  + PL++       
Sbjct: 79  SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       L+  G  + +   V++G         E+  S+ ++  R  R I+
Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E  S P++V+G
Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +++   +  L+  L   +    +R LR
Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265


>gi|293418437|ref|ZP_06660872.1| taurine transporter subunit [Escherichia coli B088]
 gi|300903373|ref|ZP_07121301.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|301301510|ref|ZP_07207645.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|291324965|gb|EFE64380.1| taurine transporter subunit [Escherichia coli B088]
 gi|300404668|gb|EFJ88206.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300843007|gb|EFK70767.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|315256185|gb|EFU36153.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
          Length = 275

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|170724138|ref|YP_001751826.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762141|gb|ACA75457.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 279

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 87  SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   T  +  R++ILP   P 
Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPARLRAAQSLGATKVQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256

Query: 566 VLALN 570
             AL 
Sbjct: 257 AFALE 261


>gi|312198035|ref|YP_004018096.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311229371|gb|ADP82226.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 301

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+A  +  R+L+     ++       + A  R +  +L PI++I + +P L F+   +V+
Sbjct: 107 QHALVSAARILAGWAAGVVLGVAMGGVMASVRVIRHLLDPIIEITRPLPPLAFIPLFIVW 166

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E      I    V  M  +   +L  +P++L + SRS   S       
Sbjct: 167 FG-------IG-ETPKFILILIGVVPVMIIATVSALDAVPKELVQASRSLGASPLWALLT 218

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +  ++P ++  M ++M G W  +VA E+I
Sbjct: 219 VRLRSALPAIITGMRLAMGGAWTSIVAVELI 249


>gi|225867769|ref|YP_002743717.1| glycine-betaine binding permease [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701045|emb|CAW97837.1| putative glycine-betaine binding permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 576

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 33/175 (18%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +IS+L         AK++ +  V+ P+LD+MQ++P   +L   V +F     G V 
Sbjct: 102 LVASLISVLLGIPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMVP 158

Query: 133 GAELAAIFAI-----FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G   + IFA+     FTS           ++  IP +L E S +F  +  QK   + +P 
Sbjct: 159 GVFASVIFALPPTVRFTS----------LAIRQIPTELIEASDAFGSTPKQKLLKVELPL 208

Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +    M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 209 AKHTMMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|49083280|gb|AAT50991.1| PA5095 [synthetic construct]
          Length = 284

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A  IS+L       LAA+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|76789600|ref|YP_328686.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13]
 gi|237805208|ref|YP_002889362.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168130|gb|AAX51138.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13]
 gi|231273508|emb|CAX10424.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|77459517|ref|YP_349024.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77383520|gb|ABA75033.1| putative integral membrane transport protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 279

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   + +R+L    I      V+A     SR     L P    ++SIP L ++   +++
Sbjct: 76  KHIGASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLLLW 135

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  K++   + A F ++ + V         ++ NI R L EV   +  S  Q    
Sbjct: 136 LGIDETSKIVLIAIGAFFPVYVNVV--------AAIRNIDRKLVEVGHIYGFSPLQLVRR 187

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PGL   +   MS  W F+VA+E+I          G+G Y+    +E     I+
Sbjct: 188 ILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GLG-YLLSDGRETSRPDIV 240

Query: 243 YAMLTMLGVI-FLYDQLLF---RPMIVWSNKF 270
            A + +L ++  L D LL    R  +VW + F
Sbjct: 241 LAAIIVLALLGKLSDGLLAILERRWLVWRDAF 272



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 25/192 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++   I + + +    W+G      + ++P    L + P+  + PL++       
Sbjct: 81  SLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLL------- 133

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +  NV+A          EV   +  +  +  R I+
Sbjct: 134 ----LWLGIDETSKIVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGFSPLQLVRRIL 189

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  +    +W   + +E+ +       T GLG  +++  E  S P++VL 
Sbjct: 190 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 242

Query: 559 VLIMCCFVLALN 570
            +I+   +  L+
Sbjct: 243 AIIVLALLGKLS 254


>gi|107104191|ref|ZP_01368109.1| hypothetical protein PaerPA_01005264 [Pseudomonas aeruginosa PACS2]
 gi|116053242|ref|YP_793565.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894194|ref|YP_002443063.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238198|ref|ZP_04931521.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719]
 gi|254244024|ref|ZP_04937346.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192]
 gi|296391943|ref|ZP_06881418.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313110133|ref|ZP_07796035.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa 39016]
 gi|115588463|gb|ABJ14478.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170129|gb|EAZ55640.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719]
 gi|126197402|gb|EAZ61465.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192]
 gi|218774422|emb|CAW30239.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310882537|gb|EFQ41131.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A  IS+L       LAA+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|315284931|gb|EFU44376.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 354

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|157151308|ref|YP_001450345.1| phosphate transport protein PstC [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157076102|gb|ABV10785.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 305

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    V+P
Sbjct: 230 AIQMVVGNSAVVP 242


>gi|89902501|ref|YP_524972.1| nitrate transport permease [Rhodoferax ferrireducens T118]
 gi|89347238|gb|ABD71441.1| nitrate transport permease [Rhodoferax ferrireducens T118]
          Length = 288

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++A ++ IP+G  IG  P +     PF Q+L       + PL +     Y 
Sbjct: 100 SLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFDPFIQVLKPISPLAWMPLAL-----YT 154

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +    + +IF  + W +L N   G +A   ++  VA +  +   R    +ILP   P
Sbjct: 155 IKDSSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVILPAAAP 214

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S P V+  + ++  
Sbjct: 215 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLPNVIFAIGVIGV 268

Query: 565 FVLALN 570
             + L+
Sbjct: 269 VGMLLD 274



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  + IF IF   +W M  +    +  + R+   V+R+  ++  +  + + +P + P ++
Sbjct: 158 SSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVILPAAAPTIL 217

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG ++        L  +++A + ++GV+ 
Sbjct: 218 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLPNVIFA-IGVIGVVG 270

Query: 254 LYDQLLF 260
           +   LLF
Sbjct: 271 MLLDLLF 277


>gi|84686267|ref|ZP_01014162.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665794|gb|EAQ12269.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacterales bacterium HTCC2654]
          Length = 277

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +         AA   +L   + P+LD+MQ++P   +L   +V+
Sbjct: 91  EETTESLTLVLSACVVCMAIGVPIGIAAAHRPKLYAGMRPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG      LA +  +  + +  +T   +  + + P  L+E +++F  +G Q  W
Sbjct: 151 FGIGMVPGL-----LATVIFVLPAPI-RLT---HLGISSTPMALKEAAQAFGATGRQLLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KVELPYALPQIMTGLNQTIMLSLS 225


>gi|242239916|ref|YP_002988097.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii
           Ech703]
 gi|242131973|gb|ACS86275.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii
           Ech703]
          Length = 304

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + R +  +  P++ +++ +  L +L   ++ F          AE A+ + IF   +W
Sbjct: 136 LIGRFRFMAAMFNPLIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 187

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            M  +  + +  IP+D   V+R  RLS +   + + +P  +P ++  + +S+   W  +V
Sbjct: 188 PMILNTAEGVRRIPQDYLNVARVLRLSEFTIMYKILLPAVLPSVLTGVRLSIGIAWLVIV 247

Query: 209 ASEMIVVG 216
           A+EM+  G
Sbjct: 248 AAEMLTGG 255


>gi|82778052|ref|YP_404401.1| glycine betaine transporter membrane protein [Shigella dysenteriae
           Sd197]
 gi|309786249|ref|ZP_07680877.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 1617]
 gi|81242200|gb|ABB62910.1| high-affinity transport system for glycine betaine and proline
           [Shigella dysenteriae Sd197]
 gi|308925994|gb|EFP71473.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 1617]
          Length = 354

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +   FA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTITFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303


>gi|332286150|ref|YP_004418061.1| substrate-binding region of ABC-type glycine betaine transport
           system [Pusillimonas sp. T7-7]
 gi|330430103|gb|AEC21437.1| substrate-binding region of ABC-type glycine betaine transport
           system [Pusillimonas sp. T7-7]
          Length = 654

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L + ++S++       +AA+SR L  VL P+LD+MQ++P   +L   V+    L  GKV
Sbjct: 464 VLVSTLVSIVLGVPIGIIAARSRLLRRVLTPVLDVMQTLPSFVYL-IPVLMLFGL--GKV 520

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+FA     V  +       L  + RD+ E +++F ++ WQ    + +P + P 
Sbjct: 521 -----PALFATIIYAVPPLIRLTILGLRQVDRDVMEAAQAFGVTRWQMLTRVTLPLARPS 575

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  +  +       VV + MI
Sbjct: 576 IMAGINQTTMMALAMVVVASMI 597


>gi|296437343|gb|ADH19513.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/11222]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIENSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERRTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|262282375|ref|ZP_06060143.1| phosphate ABC transporter, permease PstC [Streptococcus sp.
           2_1_36FAA]
 gi|262261666|gb|EEY80364.1| phosphate ABC transporter, permease PstC [Streptococcus sp.
           2_1_36FAA]
          Length = 305

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   +  +TF  
Sbjct: 117 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMT 175

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 176 TDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVV 235

Query: 215 VGDTVIP 221
               V+P
Sbjct: 236 GNSAVVP 242


>gi|212696313|ref|ZP_03304441.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676942|gb|EEB36549.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 281

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 31/156 (19%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
           +KS  +  V++P+LD MQ++P   +L   V +F + + PG            + +S ++ 
Sbjct: 119 SKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPG------------VISSIIFA 166

Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           M  ++  +   +  +P DL E + SF  +  QK + L +P + P    G+   +M+++S 
Sbjct: 167 MPPAVRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLS- 225

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                    M+VV  ++I  PG+G+ I  ++   D+
Sbjct: 226 ---------MVVVA-SMIGAPGLGNVIYTSVSRNDV 251


>gi|322831482|ref|YP_004211509.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321166683|gb|ADW72382.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 399

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 214 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVVRL 268

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 269 TI---LGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLMLALS----M 321

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346


>gi|292487853|ref|YP_003530728.1| aliphatic sulfonate ABC transporter permease [Erwinia amylovora
           CFBP1430]
 gi|292899079|ref|YP_003538448.1| aliphatic sulfonates ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198927|emb|CBJ46037.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Erwinia amylovora ATCC 49946]
 gi|291553275|emb|CBA20320.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           amylovora CFBP1430]
 gi|312171975|emb|CBX80232.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           amylovora ATCC BAA-2158]
          Length = 263

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 95  RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   + +++++P L  +   +++F      K+    L  +F I+         +
Sbjct: 91  RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  + NI   L E++RS+ LSGW  F  + +P ++P ++  +  ++   W        +
Sbjct: 143 TWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPGALPSMMVGVRFALGLMWL------TL 196

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +V +T+    GIG Y+A+  +E    D++    ILYA+L  L       QLL R  + W 
Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADA--SAQLLERTWLRWH 253

Query: 268 NKFRLERTT 276
             ++L+   
Sbjct: 254 PAYQLKEEN 262



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G     +   E+A S+ ++GW  +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYINTWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPGALPSMMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADASA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERTWLRWHPAY 256


>gi|254439504|ref|ZP_05052998.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254950|gb|EDY79264.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 510

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 5/161 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + YQ+V   + LG  ++FRV+V  ++ + I IP+G  +G          P  + +  
Sbjct: 302 IAKYGYQNVYLTVHLG-FSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 360

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PLV+       +        L+     W +     +G S         A S  
Sbjct: 361 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 416

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            + W+  R++I+P   P   TGA  A G  W   + +E+ +
Sbjct: 417 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 457



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F        IG E+  IF +F + +W M  +    +  +
Sbjct: 353 PIVEFMRPVPPLALIPLVIIWFG-------IG-EVGKIFLLFLAALWIMAIAARSGVSGV 404

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++   +    
Sbjct: 405 RITKVHAAYSLGASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE---- 460

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             GIG  I  A K Q+   IL  ++ +  V F  D L+    R ++ W  K
Sbjct: 461 --GIGKMITTASKFQNTDIILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 509


>gi|255311697|ref|ZP_05354267.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 6276]
 gi|255317998|ref|ZP_05359244.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 6276s]
 gi|296436412|gb|ADH18586.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/9768]
 gi|296438271|gb|ADH20432.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/11074]
 gi|297140772|gb|ADH97530.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/9301]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|237803287|ref|YP_002888481.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT]
 gi|231274521|emb|CAX11317.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|15605590|ref|NP_220376.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D/UW-3/CX]
 gi|3329327|gb|AAC68451.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D/UW-3/CX]
 gi|297748981|gb|ADI51527.1| ABC transporter permease protein [Chlamydia trachomatis D-EC]
 gi|297749861|gb|ADI52539.1| ABC transporter permease protein [Chlamydia trachomatis D-LC]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LTML +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|33595618|ref|NP_883261.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33600132|ref|NP_887692.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33565696|emb|CAE40344.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33567730|emb|CAE31644.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 285

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A    IP+G+ IG+    S  + P  Q L   P   + P  ++      
Sbjct: 92  STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +      S+ +IF G  + I+ N   GA     +    AS    +  +  R ++LP   P
Sbjct: 152 MG-----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMP 206

Query: 505 YYVTGAITACGGAWNASIVSEVAS 528
              TG     G +W A IVSE+ +
Sbjct: 207 SIFTGLRIGLGISWTAVIVSEMVA 230



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +L P++  ++ IPI  +L F++  F           ++ +IF IF    + +  
Sbjct: 117 SRLTSQLLDPLIQGLRPIPITAWLPFSIALFGI--------RDMGSIFLIFLGGFYAIVV 168

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q   ++ R+L   +     S  Q    + +P +MP +   + + +   W  V+ SEM
Sbjct: 169 NTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPSIFTGLRIGLGISWTAVIVSEM 228

Query: 213 IVV 215
           + V
Sbjct: 229 VAV 231


>gi|50121917|ref|YP_051084.1| nitrate transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612443|emb|CAG75893.1| nitrate transporter permease component [Pectobacterium atrosepticum
           SCRI1043]
          Length = 280

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  
Sbjct: 119 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 170

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +VA+EM+  
Sbjct: 171 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTG 230

Query: 216 G 216
           G
Sbjct: 231 G 231



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP G  IG    +++ + P   LL       + P  +  
Sbjct: 86  WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 143

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ +   R I+LP
Sbjct: 144 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 201

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530
            + P  +TG   + G AW   + +E+ + G
Sbjct: 202 AVLPNVLTGVRLSIGIAWLVIVAAEMLTGG 231


>gi|15600288|ref|NP_253782.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9951390|gb|AAG08480.1|AE004922_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A  IS+L       LAA+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|325272379|ref|ZP_08138777.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324102504|gb|EGB99952.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 236

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 44  SLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 103

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   +  +  R++ILP   P 
Sbjct: 104 LSKVL-LIFLAIFAP---IAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSALPD 159

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 160 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 213

Query: 566 VLALNRFL 573
             AL   L
Sbjct: 214 AFALEMSL 221


>gi|188583461|ref|YP_001926906.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346959|gb|ACB82371.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 250

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +++ IP L ++ F +++F  + P        AA+F I     W + F+   ++  + 
Sbjct: 96  VVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRGVD 147

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   G   +   + +P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PGIG+ +  A        ++  MLTM  +  L+D
Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFD 235


>gi|21241618|ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106977|gb|AAM35736.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  + PL++       
Sbjct: 79  SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       L+  G  + +   V++G         E+  S+ ++  R  R I+
Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E  S P++V+G
Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +++   +  L+  L   +    +R LR
Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265


>gi|254422823|ref|ZP_05036541.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC
           7335]
 gi|196190312|gb|EDX85276.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC
           7335]
          Length = 279

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           + L + W   I++ RV +   +AS+I +P+GI IG  P       P+ QLL       + 
Sbjct: 79  NDLGIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAWL 138

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +    Y   +  +    +++  + W  L N   G +    ++ +V+ +   +  R  
Sbjct: 139 PLGL----YIFRDSEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRTI 194

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             II+P   P  V+G   + G +W   + +E+       L  TGLG +I         P 
Sbjct: 195 FKIIIPAALPNIVSGLRISMGISWLVIVAAEM-------LLGTGLGYFIWNEWNNLYIPN 247

Query: 555 VVLGVLIMCCFVLALN 570
           +++ + I+    L L+
Sbjct: 248 ILVAIFIIGLVGLILD 263



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 43/81 (53%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E+  IF I  S +W    +    + N+  +  +VS++   S  +  + + +P ++P +V
Sbjct: 148 SEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRTIFKIIIPAALPNIV 207

Query: 194 WNMMMSMSGGWFFVVASEMIV 214
             + +SM   W  +VA+EM++
Sbjct: 208 SGLRISMGISWLVIVAAEMLL 228


>gi|262281922|ref|ZP_06059691.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262262376|gb|EEY81073.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|118592851|ref|ZP_01550240.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118434621|gb|EAV41273.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 319

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 14/181 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++M R+++  I A++I I  G+ +G    I S I P+ ++L   PA  + PL +     
Sbjct: 125 AVSMQRILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAI----- 179

Query: 444 YHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             + P    S++ I   G  + I+ N + G    P      A S   +  + + ++ILP 
Sbjct: 180 -LMWPTEEASIIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPA 238

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P    G     G +W + +  E+ S  +      G+G +   +    ++P++V+G+L+
Sbjct: 239 ALPSIAAGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLINYPDIVVGMLV 292

Query: 562 M 562
           +
Sbjct: 293 I 293



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 40/204 (19%), Positives = 93/204 (45%), Gaps = 17/204 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   + + +   +   L  +S+ +  ++ P +++++ IP + ++   ++    ++P +
Sbjct: 130 RILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAIL----MWPTE 185

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + I+      ++ +  +    +   P  L   ++S   S  Q FW++ +P ++P
Sbjct: 186 ----EASIIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAALP 241

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM-- 248
            +   + + M   WF ++A E I+ G       GIG +   A    +   I+  ML +  
Sbjct: 242 SIAAGLAIGMGVSWFSLLAGE-IISGQY-----GIGYFTWNAYSLINYPDIVVGMLVIGG 295

Query: 249 LGVIFLYD-QLLFRPMIVWSNKFR 271
           LG +  Y  +L  +P++ W  + R
Sbjct: 296 LGTLSTYAVRLAMQPLLAWQKRAR 319


>gi|293408514|ref|ZP_06652353.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471692|gb|EFF14175.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 275

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|283458841|ref|YP_003363485.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rothia
           mucilaginosa DY-18]
 gi|283134900|dbj|BAI65665.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Rothia mucilaginosa DY-18]
          Length = 280

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++ + +T R+L    I  +   V   L   S  + ++  P +  ++++P L ++   
Sbjct: 81  ELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGALRAVPSLAWVPLL 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++       KV    + A F ++T+        +  +L ++   L E +R+F L G + 
Sbjct: 141 LLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAHVDPKLVEAARAFGLKGLRL 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F  + +P  +P +V  + ++++  W F+VA+E++
Sbjct: 193 FTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELL 226


>gi|256392966|ref|YP_003114530.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256359192|gb|ACU72689.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 314

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + + LR+L   +I+ L         A+SR    +L P+L++++ IP +  +   ++ 
Sbjct: 113 QDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILA 172

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +   G V     AA F I          S   ++  +P  +E+  R+     W     
Sbjct: 173 FPSNEQGMVFITATAAFFPIL--------VSTRHAVRALPTVVEDAVRTLGAGRWTVLRR 224

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++PG+   + + M   W  V+++EMI
Sbjct: 225 VVLPGALPGVFGGLSVGMGVAWICVISAEMI 255



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 95/263 (36%), Gaps = 42/263 (15%)

Query: 350 CVVCGVAIGIAWQ-----------------SIGYIVNHFTYQDVLYVIWLG-CITMFRVV 391
           CV  G AI +AWQ                 S G +   F +Q    V +     ++ R++
Sbjct: 65  CVSLGAAI-LAWQLLTTHQVTFWIRFGNLPSAGAVATDFRHQLGTAVYYQDIAASLLRIL 123

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              +IA +  I  GI +         + P  +++   PA    P+ +         P+  
Sbjct: 124 GGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILAF------PSNE 177

Query: 452 LSLLMIFGTQWY--ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             ++ I  T  +  IL +      A P   ++   +     W   R ++LPG  P    G
Sbjct: 178 QGMVFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGAGRWTVLRRVVLPGALPGVFGG 237

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM------- 562
                G AW   I +E+ S  +      G+G    E+     +P VV+G+L +       
Sbjct: 238 LSVGMGVAWICVISAEMISGQY------GIGYRTWEAYTVVDYPSVVVGMLTIGLLGGAT 291

Query: 563 -CCFVLALNRFL-WHPLYLYGTR 583
                LA  R   W P    G+R
Sbjct: 292 AAAVELAGRRVTGWLPRGTEGSR 314


>gi|186470976|ref|YP_001862294.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197285|gb|ACC75248.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 284

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)

Query: 361 WQS-IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           WQ+ I  + N +  Q ++  I + C   FR+V+  + A  I +P+G+ +     +   I 
Sbjct: 70  WQAFIEIVRNGYGGQSLISDILISC---FRIVIGFVGAIAIGVPIGLLMSRNKIVFDIID 126

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q +   P   + PL+V       L      ++L++ GT   I+   ++G  + P   
Sbjct: 127 PLLQFVRPVPPLAYIPLLVVWFGIGELPK----AILILVGTIPVIIIGTMSGVKSTPPLR 182

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +   +  + +R ++LP   P   T      G AW   + +E+ +       ++GL
Sbjct: 183 ISVARTLGASNAQIFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIA------ASSGL 236

Query: 540 G 540
           G
Sbjct: 237 G 237


>gi|319794601|ref|YP_004156241.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315597064|gb|ADU38130.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 257

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +TTL  L    +++L     A + A SR +   + P+L   QSIP +      VV+F   
Sbjct: 61  KTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + P KVI A L   F +  S V  M F       ++  D+ +++RS   S  Q F+ + +
Sbjct: 121 ILP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +S++      +A    VVG+ V    GIG  + +A    D L +++A 
Sbjct: 172 PQALPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVLQVANGNFD-LPLMFAA 224

Query: 246 LTMLG----VIFLYDQLLFRPMIVWSNKFR 271
           L +L     V+F+   L+ R MI W    R
Sbjct: 225 LVVLSSIGVVLFVAVDLVERLMIPWHASQR 254


>gi|239501805|ref|ZP_04661115.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii AB900]
          Length = 284

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVV   ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVFGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+   S++ I   G  + IL N + G  A        A S   +       +I+PG  
Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P  +TG     G  W   + +E+ S  H      G+G +  ES    ++  +V+G++++
Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVFGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F +        +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S       + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           MI          GIG +   +   Q+   I+  M+ ++G + ++   L R   V  N+F
Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275


>gi|171741918|ref|ZP_02917725.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC
           27678]
 gi|283457058|ref|YP_003361622.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|306824033|ref|ZP_07457406.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
 gi|309800758|ref|ZP_07694893.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171277532|gb|EDT45193.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC
           27678]
 gi|283103692|gb|ADB10798.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
 gi|304552686|gb|EFM40600.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
 gi|308222603|gb|EFO78880.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 275

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 12/179 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A++I +P+G+ +G     S+ ++P   L+   P   + PL +  +     +     ++ 
Sbjct: 90  LAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPLTLIMIGIGDRS-----TIF 144

Query: 456 MIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++F    + I+ N +      P    E A+    +  +    ++ P   P  + G   A 
Sbjct: 145 LVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGKALWKVVFPAALPGIIGGLRVAV 204

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G AW   +V E+         T GLGA I E+        +V G+ I+       +R +
Sbjct: 205 GLAWALLVVGEMTGI------TVGLGAMITEAKNVSKTDLIVAGMFIIGILGFLSDRLI 257


>gi|260588477|ref|ZP_05854390.1| putative ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|331082246|ref|ZP_08331373.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540952|gb|EEX21521.1| putative ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|330403040|gb|EGG82605.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 255

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           C ++FR++    +A +  +  G      P I     P    + + P   F  L++  V  
Sbjct: 62  CFSLFRIIGGFFLAVLAGVLGGSIASRLPKIQELFAPLILAMKSVPVASFVILILIWVPS 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +L+  +  S LM+F     I  NV+ G      +  E+A  F ++G    RYI L  + 
Sbjct: 122 ENLSVTI--SFLMVFPV---IYTNVLNGIQNTDKNLLEMAQVFQVSGKNKIRYIYLSEVL 176

Query: 504 PYYVTGAITACGGAWNASIVSEV 526
           P++  G   + G  W A + +EV
Sbjct: 177 PFFRAGCSVSLGLCWKAGVAAEV 199


>gi|220914798|ref|YP_002490106.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219952549|gb|ACL62939.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++A  +T R+L+  VI+ L   +  T    SR     L P L +++ +P + ++   +++
Sbjct: 80  RHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAIIW 139

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F          A+  AIF +F    +    +    +  I R+L         +G Q   +
Sbjct: 140 FGI--------ADKPAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLMH 191

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           + VP ++P +   + +++   W   V +EM+ V   V
Sbjct: 192 IVVPAALPSIFAGLRIAIGSAWMLTVTAEMVAVKSGV 228



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +RV+   +IA +  I +G  IG+       ++P  Q+L   P   + PL +       
Sbjct: 85  STWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAIIWFGIAD 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P ++L  L  F   +  L N I G      +     +    TG +   +I++P   P 
Sbjct: 145 -KPAIFLVFLGAF---FPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLMHIVVPAALPS 200

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
              G   A G AW  ++ +E+ +
Sbjct: 201 IFAGLRIAIGSAWMLTVTAEMVA 223


>gi|115361274|ref|YP_778411.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115286602|gb|ABI92077.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 295

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F  L  G +
Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P 
Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235


>gi|328945845|gb|EGG39996.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1087]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|327468560|gb|EGF14039.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK330]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|308179620|ref|YP_003923748.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|308045111|gb|ADN97654.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 337

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+ +++   PA  + PL +      ++        L+ F   + + F  I G      ++
Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+           GL
Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288

Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563
           G +I  +   G++ +V   ++IM 
Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312


>gi|293393333|ref|ZP_06637646.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291424153|gb|EFE97369.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 279

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A +I +PVGI +G    +   + P  ++    P   + PL+V     
Sbjct: 85  AASLGRILLALLAAVMIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A +     W+  R+++LP   
Sbjct: 145 GETS-KILLIYLAIFAP---VTLSTVAGVRSVAQVRLRAARALGANRWQVLRFVVLPNAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 201 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 254

Query: 564 CFVLALN 570
                L 
Sbjct: 255 IIAFGLE 261



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+++I + +P L +L   V++F        IG E + I  I+ +    +T S    +
Sbjct: 118 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSTVAGV 169

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   + WQ   ++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 170 RSVAQVRLRAARALGANRWQVLRFVVLPNALPEILTGIRIGLGVGWSTLVAAELI 224


>gi|206577969|ref|YP_002237923.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288934833|ref|YP_003438892.1| nitrate ABC transporter inner membrane protein [Klebsiella
           variicola At-22]
 gi|290508976|ref|ZP_06548347.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206567027|gb|ACI08803.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889542|gb|ADC57860.1| nitrate ABC transporter, inner membrane subunit [Klebsiella
           variicola At-22]
 gi|289778370|gb|EFD86367.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 294

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV V   +A++  IP+G  IG     +    P   LL    
Sbjct: 89  YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P  +  + +    P    S  +   + W ++ N   G    P D+  VA    ++
Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
            W   R I+ P + P  +TG   + G AW   + +E+ + G
Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245


>gi|126699086|ref|YP_001087983.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile 630]
 gi|255100508|ref|ZP_05329485.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-63q42]
 gi|115250523|emb|CAJ68347.1| ABC-type transport system, sulfonates-family permease [Clostridium
           difficile]
          Length = 256

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++          
Sbjct: 65  RILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LW  +       ++I  + + I  N + G     N   EV  SF+++  R +  II+P 
Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 173

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ +
Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227

Query: 562 M 562
           +
Sbjct: 228 I 228


>gi|27464137|gb|AAO15989.1|AF514870_5 Abc2 [Lactobacillus plantarum]
          Length = 337

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+ +++   PA  + PL +      ++        L+ F   + + F  I G      ++
Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+           GL
Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288

Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563
           G +I  +   G++ +V   ++IM 
Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312


>gi|324994216|gb|EGC26130.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK678]
 gi|325697943|gb|EGD39827.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK160]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|323353440|ref|ZP_08087973.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|322121386|gb|EFX93149.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|332383238|gb|AEE68085.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis CS]
          Length = 285

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A    IP+G+ IG+    S  + P  Q L   P   + P  ++      
Sbjct: 92  STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +      S+ +IF G  + I+ N   GA     +    AS    +  +  R ++LP   P
Sbjct: 152 MG-----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMP 206

Query: 505 YYVTGAITACGGAWNASIVSEVAS 528
              TG     G +W A IVSE+ +
Sbjct: 207 SIFTGLRIGLGISWTAVIVSEMVA 230



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +L P++  ++ IPI  +L F++  F           ++ +IF IF    + +  
Sbjct: 117 SRLTSQLLDPLIQGLRPIPITAWLPFSIALFGI--------RDMGSIFLIFLGGFYAIVV 168

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q   ++ R+L   +     S  Q    + +P +MP +   + + +   W  V+ SEM
Sbjct: 169 NTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPSIFTGLRIGLGISWTAVIVSEM 228

Query: 213 IVV 215
           + V
Sbjct: 229 VAV 231


>gi|327490635|gb|EGF22416.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1058]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|114761135|ref|ZP_01441050.1| Binding-protein-dependent transport systems inner membrane
           component [Pelagibaca bermudensis HTCC2601]
 gi|114545383|gb|EAU48385.1| Binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. HTCC2601]
          Length = 256

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 20/222 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + LD  +L ++AS T    L+   ++ +         A S  +   + P +   Q IP +
Sbjct: 48  VALDPRTL-RHASITLTETLAGFGLATVIGMTVGWAVAASPLIERAVHPFIVASQVIPKV 106

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             +   VV+F      K++ A + A F +  + V          L ++     +V  S +
Sbjct: 107 ALVPLFVVWFGFGMTSKIVVAAVIAFFPVLVNTVLG--------LRSVQPGHADVFHSLK 158

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            + WQ+ W L +P ++P ++  M M++      V+A+   VVG+ +    G+G Y+A+A 
Sbjct: 159 ATLWQRIWLLQIPSALPAILAGMEMAI------VLATIGAVVGEFLGGSSGLG-YMAVAT 211

Query: 234 K---EQDLLAILYAMLTMLG-VIFLYDQLLFRPMIVWSNKFR 271
               + D L ++  +LT++G V++     L R ++ WS+  +
Sbjct: 212 MNAFQTDRLFVIIILLTLIGFVLYAMMAGLKRALVSWSDNQK 253


>gi|83953214|ref|ZP_00961936.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1]
 gi|83842182|gb|EAP81350.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1]
          Length = 357

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 11/129 (8%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VSR  +++ + K   L +P ++P +   + +S+  GW 
Sbjct: 234 SLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+LT+  + FL D++++  
Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYAL 347

Query: 261 RPMIVWSNK 269
           + M  +SN 
Sbjct: 348 QSMFTFSNN 356



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 16/190 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453
           +IASI+ IP+GI  G     ++ + P  Q+        + P+V   VS  Y  N  ++  
Sbjct: 162 LIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTNDGMFSK 221

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G ++   D   V+    +  +     ++LP   P   
Sbjct: 222 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ VL +  
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAVLTIGI 335

Query: 565 FVLALNRFLW 574
               L+R ++
Sbjct: 336 IGFLLDRVMY 345


>gi|332364733|gb|EGJ42502.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1059]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|332364432|gb|EGJ42206.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK355]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|332363182|gb|EGJ40967.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK49]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|296269359|ref|YP_003651991.1| binding-protein-dependent transporter inner membrane component
           [Thermobispora bispora DSM 43833]
 gi|296092146|gb|ADG88098.1| binding-protein-dependent transport systems inner membrane
           component [Thermobispora bispora DSM 43833]
          Length = 277

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 13/193 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV+V     ++  I + +  G      + + P  Q++   P   FF L+   + +
Sbjct: 81  SVSLQRVLVGFTAGAVAGIGLALIAGLSRAGENAVDPLMQMIRTLP---FFGLIPLFILW 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + +     + LL+       +  N  AG         EVA +  ++  +  R+I+LPG  
Sbjct: 138 FGIGETPKV-LLVALAVSVPLYLNTFAGIRGVDGKLAEVAQTLKLSRAQLIRHIVLPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G AW A IV+E      I+    GLG  I ++ E      VV+G+L+  
Sbjct: 197 PQTLVGLRQSLGVAWLALIVAE-----QINA-DAGLGFMINDAREFLRTDVVVVGLLVYS 250

Query: 564 CFVL---ALNRFL 573
              L   AL R L
Sbjct: 251 ALGLLTDALVRLL 263


>gi|257462370|ref|ZP_05626784.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Fusobacterium sp. D12]
 gi|317060035|ref|ZP_07924520.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12]
 gi|313685711|gb|EFS22546.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 31/170 (18%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAE 135
           ++S+L       L+AKS ++  +L PILD MQ++P   +L   V +F + + PG      
Sbjct: 106 LLSILIGIPLGILSAKSDQVEGILKPILDFMQTMPSFVYLIPAVAFFGIGIVPG------ 159

Query: 136 LAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS---- 188
                 +F S ++++  T  M    +  IP +L EVS+SF  +  Q+   +  P +    
Sbjct: 160 ------VFASIIFSLPPTVRMTNLGIRQIPEELIEVSKSFGTTKMQQLCGIEFPLAKNTI 213

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + G+  ++M+++S           +VV  ++I  PG+G  +  A++  ++
Sbjct: 214 LAGINQSIMLALS-----------MVVTASMIGAPGLGRGVLEALQRAEV 252


>gi|271500181|ref|YP_003333206.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270343736|gb|ACZ76501.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 263

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 21/196 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ S +T R L+   I      V   +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLSISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  +  I   L E++RS+ LSG++ F  
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRTIDSGLLEMARSYGLSGFRLFRE 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  S+   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VVLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVI 252
               ILYA+L  L  I
Sbjct: 225 VVAIILYALLGKLADI 240



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 21/203 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +    I   + + +G   G        +    Q+L   P     PLV+    +
Sbjct: 63  SISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G     +   E+A S+ ++G+R +R ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRTIDSGLLEMARSYGLSGFRLFREVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G  W   IV+E  S       ++G+G Y+A +  +    +VV+  +I+ 
Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 564 CFV--------LALNR--FLWHP 576
             +        L L R    WHP
Sbjct: 232 ALLGKLADIIALTLERLWLRWHP 254


>gi|186476406|ref|YP_001857876.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184192865|gb|ACC70830.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 20/184 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           FRP I   +    Q++   PA    PLV+    ++ +     L  L+  G  + I  N  
Sbjct: 111 FRP-IDIALDTTVQMIRNIPALAMIPLVIL---WFGIEEEAKL-FLVALGVFFPIYVNTY 165

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +   +  E+A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S 
Sbjct: 166 HGIRSVDANLIEMARSYGVKGFALYRDVILPGALPSILVGVRFAFGLMWVTLIVAETIS- 224

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNR--FLWHPLYLY 580
                  +G+G     + E      VV+G+L+              L R    WHP Y  
Sbjct: 225 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKGLERVSLRWHPAYQR 279

Query: 581 GTRC 584
           G + 
Sbjct: 280 GEKA 283


>gi|325693734|gb|EGD35653.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK150]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|325276455|ref|ZP_08142220.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324098415|gb|EGB96496.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 251

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G   H+ +   P  Q L       + P+VV  +      P   +  L+ F   W
Sbjct: 81  PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 136

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N  AG       + +++ S   T W     +I+PG+  + +TG   A G  W   +
Sbjct: 137 PILLNTAAGVRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLV 196

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             E+         + GLG +I ++ ++ ++ E++  VL++
Sbjct: 197 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLI 230


>gi|300768942|ref|ZP_07078833.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300493463|gb|EFK28640.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 337

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+ +++   PA  + PL +      ++        L+ F   + + F  I G      ++
Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+           GL
Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288

Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563
           G +I  +   G++ +V   ++IM 
Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312


>gi|324992122|gb|EGC24044.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK405]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|306835145|ref|ZP_07468185.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
 gi|304569002|gb|EFM44527.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
          Length = 292

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AMVI++   F   + A   R       P + I++ +  L +L   +    +        A
Sbjct: 116 AMVIAIPLGFWLGSSATFRR----ATDPFVQILRPVSPLAWLPLGLALLRD--------A 163

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E  A+F I  S +W    +  +++  I    + ++ +   +  Q+  Y+  P ++PG++ 
Sbjct: 164 ENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPTALPGIIT 223

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTV 219
            M  S+S  W  +VA+EM+V G  V
Sbjct: 224 GMRQSLSTAWLVIVAAEMLVGGQGV 248



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 7/169 (4%)

Query: 361 WQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           W     I++   Y+D    + + W    ++ RV++   IA +I IP+G W+G        
Sbjct: 77  WDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRA 136

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             PF Q+L       + PL ++ +             ++I    W  L N I        
Sbjct: 137 TDPFVQILRPVSPLAWLPLGLALLRDAENTA----VFVIILSALWPTLLNTIEAVRGIHP 192

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +K +A++      +   YI+ P   P  +TG   +   AW   + +E+
Sbjct: 193 TYKNLAATLGTNRMQQLLYIVGPTALPGIITGMRQSLSTAWLVIVAAEM 241


>gi|13473801|ref|NP_105369.1| taurine transport system permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024552|dbj|BAB51155.1| taurine transport system permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 286

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV   ++ A +I +PVG+ IG          P  + L   P   + PLV+       
Sbjct: 95  SLGRVFAALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGE 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  L +++ M+      +  +  +G      +    A S   T  +  R++ILP   P 
Sbjct: 155 PSKILVIAIAMLA----PVALSTASGVRGVSQERINAARSLGATKRQVVRHVILPSALPS 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W+  + +E+ +       T GLG  I  + +      V++G+L++   
Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVIMGILVIAAI 264

Query: 566 VLALN 570
              L 
Sbjct: 265 AFVLE 269



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L+ ++ IP L +L   +++F    P K        I  I  + +  +  S    +  +
Sbjct: 129 PLLEFLRPIPPLAYLPLVIIWFGIGEPSK--------ILVIAIAMLAPVALSTASGVRGV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++    +RS   +  Q   ++ +P ++P ++  + +++  GW  +VA+E++
Sbjct: 181 SQERINAARSLGATKRQVVRHVILPSALPSILTGLRIALGAGWSTLVAAELV 232


>gi|83942159|ref|ZP_00954621.1| putative nitrate transporter [Sulfitobacter sp. EE-36]
 gi|83847979|gb|EAP85854.1| putative nitrate transporter [Sulfitobacter sp. EE-36]
          Length = 357

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 11/129 (8%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W    +    + +I +DL  VSR  +++ + K   L +P ++P +   + +S+  GW 
Sbjct: 234 SLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260
            ++A+EM+         PG+G ++    +    Q L  I+ A+LT+  + FL D++++  
Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYAL 347

Query: 261 RPMIVWSNK 269
           + M  +SN 
Sbjct: 348 QSMFTFSNN 356



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 16/190 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453
           +IASI+ IP+GI  G     ++ + P  Q+        + P+V   VS  Y  N  ++  
Sbjct: 162 LIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTNDGMFSK 221

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +I        + W  L N   G ++   D   V+    +  +     ++LP   P   
Sbjct: 222 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ VL +  
Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAVLTIGI 335

Query: 565 FVLALNRFLW 574
               L+R ++
Sbjct: 336 IGFLLDRVMY 345


>gi|327472840|gb|EGF18267.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK408]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|327459433|gb|EGF05779.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|327459038|gb|EGF05386.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1057]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|124266584|ref|YP_001020588.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1]
 gi|124259359|gb|ABM94353.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1]
          Length = 305

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  +G    ++  I P   LL       + P  +  + +  
Sbjct: 117 SLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISLLRPVSPLAWLP--IGLLVFKA 174

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP    ++ +   + W ++ N   G    P D+  VA   +++ W+    I+ P + PY
Sbjct: 175 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYLNVARVLNLSEWKVMTRILFPAVLPY 232

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 233 MLTGVRLSVGTAWLVIVAAEMLTGG 257



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F    P        AAI+ IF   +W M  +    +  +
Sbjct: 151 PLISLLRPVSPLAWLPIGLLVFKAANP--------AAIWTIFICSIWPMIINTAVGVQRV 202

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 203 PQDYLNVARVLNLSEWKVMTRILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGG 257


>gi|332358183|gb|EGJ36013.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1056]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|325688426|gb|EGD30444.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK72]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|307131761|ref|YP_003883777.1| Nitrate ABC transporter permease [Dickeya dadantii 3937]
 gi|306529290|gb|ADM99220.1| Nitrate ABC transporter, permease protein [Dickeya dadantii 3937]
          Length = 325

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + R +  +  PI+ +++ +  L +L   ++ F          AE A+ + IF   +W
Sbjct: 157 LIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 208

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            M  +  + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +V
Sbjct: 209 PMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIV 268

Query: 209 ASEMIVVG 216
           A+EM+  G
Sbjct: 269 AAEMLTGG 276



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 20/210 (9%)

Query: 361 WQSIGYIVNHFTYQDVLYVI--------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
           WQ+  ++     + D  YV         W    ++ RV +   +A+++ IP G  IG   
Sbjct: 105 WQT--WLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGRFR 162

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++   P   LL       + P  +  + +    P    S  +   + W ++ N   G 
Sbjct: 163 FMAAMFNPIISLLRPVSPLAWLP--IGLLLFQRAEPAS--SWTIFICSIWPMILNTAEGV 218

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G  
Sbjct: 219 RQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG-- 276

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                G+G +I       + P +++ +L++
Sbjct: 277 ----IGIGFWIWNEWNNLNVPNIIIAILVI 302


>gi|260467171|ref|ZP_05813348.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259029024|gb|EEW30323.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 286

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV   +I A ++ +PVG+ IG          P  + L   P   + PLV+       
Sbjct: 95  SLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGE 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  L +++ M+      +  +  +G      +    A S   T  +  R++ILP   P 
Sbjct: 155 PSKILVITIAMLA----PVALSTASGVRGVSQERINAARSLGATHAQVVRHVILPSALPS 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W+  + +E+ +       T GLG  I  + +      VV+G+L++   
Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMGILVIAAI 264

Query: 566 VLALN 570
              L 
Sbjct: 265 AFVLE 269



 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTF 118
           +L Q+A  +  R+ +A++ ++L   V   LA     +G  +  P+L+ ++ IP L +L  
Sbjct: 87  TLAQHAVASLGRVFAALIAAILVG-VPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P K        I  I  + +  +  S    +  + ++    +RS   +  Q
Sbjct: 146 VIIWFGIGEPSK--------ILVITIAMLAPVALSTASGVRGVSQERINAARSLGATHAQ 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              ++ +P ++P ++  + +++  GW  +VA+E++
Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELV 232


>gi|134299432|ref|YP_001112928.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134052132|gb|ABO50103.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 254

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ + +  R+ +  ++++LF F  A L   ++RL   + P+LD +  IP +  +   +++
Sbjct: 52  KHITISLYRVFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILW 111

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    LA  F +F + +  +        CN  + L EV   F  +   KF  
Sbjct: 112 FGIGETSKLAVIILATFFPVFLNTLNGILG------CN--KQLLEVGDVFGFTARDKFLR 163

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++    + +   W  ++ +E+I          GIG  I  A +      I+
Sbjct: 164 IVIPAALPSIIVGFRLGLGYSWRSLIGAELIAASS------GIGYMIIDAEQLSRPDIII 217

Query: 243 YAMLTMLGVIFLYDQLLFR---PMIVWSNK 269
             +LT+    ++ D   F+    +I W+ K
Sbjct: 218 VGILTIGLFGYIIDYCFFKLTNHLIPWAGK 247



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++RV    ++  +   P+ I +G    ++  I P    L   P     P+++    ++
Sbjct: 56  ISLYRVFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILIL---WF 112

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     L++ +I  T + +  N + G         EV   F  T    +  I++P   P
Sbjct: 113 GIGETSKLAV-IILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMC 563
             + G     G +W + I +E+ +       ++G+G Y+    E+ S P++++ G+L + 
Sbjct: 172 SIIVGFRLGLGYSWRSLIGAELIA------ASSGIG-YMIIDAEQLSRPDIIIVGILTIG 224

Query: 564 CF 565
            F
Sbjct: 225 LF 226


>gi|325689416|gb|EGD31421.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK115]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|307308504|ref|ZP_07588206.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           BL225C]
 gi|307317282|ref|ZP_07596722.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           AK83]
 gi|306896871|gb|EFN27617.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           AK83]
 gi|306900904|gb|EFN31513.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           BL225C]
          Length = 281

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + T   +L+A  +S+     +   AA+   +  ++ PILD+MQ+IP   +L   ++ 
Sbjct: 91  QETTETLALVLAATFVSMAVGVPFGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +++          + + P  L E + SF  + WQ   
Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +PF+MP    GL   +M+S+S
Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225


>gi|73542404|ref|YP_296924.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119817|gb|AAZ62080.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 284

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 12/184 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A+++ +P+GI +G      +  +PF       PA+ F PL++      
Sbjct: 93  MTVWRVLGGFVLAAVLAVPLGILMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 152

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I+  V         D  E A +   +     + +++PG  
Sbjct: 153 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGASSRGIVKRVLIPGAA 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++++ 
Sbjct: 208 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 261

Query: 564 CFVL 567
           C  L
Sbjct: 262 CIGL 265


>gi|254453930|ref|ZP_05067367.1| taurine ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198268336|gb|EDY92606.1| taurine ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 420

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 5/161 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + YQ+V   + LG  ++FRV+V  ++ + I IP+G  +G          P  + +  
Sbjct: 212 IAKYGYQNVYLTVHLG-FSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 270

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PLV+       +        L+     W +     +G S         A S  
Sbjct: 271 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 326

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            + W+  R++I+P   P   TGA  A G  W   + +E+ +
Sbjct: 327 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 367



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F        IG E+  IF +F + +W M  +    +  +
Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFG-------IG-EVGKIFLLFLAALWIMAIAARSGVSGV 314

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++   +    
Sbjct: 315 RITKVHAAYSLGASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE---- 370

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             GIG  I  A K Q+   IL  ++ +  V F  D L+    R ++ W  K
Sbjct: 371 --GIGKMITTASKFQNTDIILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 419


>gi|302391226|ref|YP_003827046.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
 gi|302203303|gb|ADL11981.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 275

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 18/152 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT + +  A VI+L        L  KS+ L  ++ PILD MQ++P   +L    ++F   
Sbjct: 88  RTFVLVFVAAVIALALGIPTGILINKSQLLNRIITPILDFMQTMPPFVYLIPATMFF--- 144

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             G V G     IFA+  + ++ ++       L  +P +LEEV  +F  + WQ  + + +
Sbjct: 145 GIGNVPGVMATVIFAMPPAIRLTDL------GLKQVPDELEEVGFAFGSTPWQMLFKVRL 198

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMI 213
           P ++P    G+   +M+S+S     VV + MI
Sbjct: 199 PLALPSIMAGINQCIMLSLS----MVVIASMI 226


>gi|284044853|ref|YP_003395193.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949074|gb|ADB51818.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 275

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 9/123 (7%)

Query: 95  RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           +LG  +V P +  +++IP+ G +   +++F      KV+   L  +  ++         +
Sbjct: 86  KLGDAIVDPPMQAIRTIPLFGLVPLFILWFGIGETPKVLLIALGVVIPLY--------LN 137

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +  +L +I  +L EV+RS RL+ W++  ++ VP ++PG +     S+   W  ++ +E I
Sbjct: 138 IVAALRSIDPELIEVARSLRLTRWERARHVIVPGALPGTLVGFRQSLGIAWLALIVAEQI 197

Query: 214 VVG 216
             G
Sbjct: 198 AAG 200



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LL+  G    +  N++A   +   +  EVA S  +T W   R++I+PG  P  + G   +
Sbjct: 124 LLIALGVVIPLYLNIVAALRSIDPELIEVARSLRLTRWERARHVIVPGALPGTLVGFRQS 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            G AW A IV+E  + G       GLG  I  + +      +V+G+L  C   L L
Sbjct: 184 LGIAWLALIVAEQIAAG------AGLGYMINNARDFLRTDVIVVGLL--CYAALGL 231


>gi|257455631|ref|ZP_05620860.1| putative aliphatic sulfonates transport permease protein SsuC
           [Enhydrobacter aerosaccus SK60]
 gi|257446914|gb|EEV21928.1| putative aliphatic sulfonates transport permease protein SsuC
           [Enhydrobacter aerosaccus SK60]
          Length = 298

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 15/138 (10%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ +TGW  ++ +ILPG  P  + G   + 
Sbjct: 167 LVAVGTFFPIYLNTYHGVRNVDKHLVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSL 226

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI------MCCFVLA 568
           G  W   IV+E  S       TTG+G     + E      ++  +L+      +  F+  
Sbjct: 227 GIMWLTLIVAETIS------ATTGIGYLAMHAREFFQIDIIMFSILVYALLGFLADFIAK 280

Query: 569 LNRFL---WHPLYLYGTR 583
              F+   WHP Y  G  
Sbjct: 281 KLEFVWLKWHPAYQQGAH 298



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 15/131 (11%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++++IP L  +   +V+F      KV    +   F I+         + Y  + N+ + 
Sbjct: 139 QMLRNIPHLALIPLVIVWFGIDEAAKVFLVAVGTFFPIY--------LNTYHGVRNVDKH 190

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E+++S+ L+GW  F  + +P ++P ++  +  S+   W        ++V +T+    G
Sbjct: 191 LVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSLGIMWL------TLIVAETISATTG 244

Query: 225 IGSYIALAIKE 235
           IG Y+A+  +E
Sbjct: 245 IG-YLAMHARE 254


>gi|85704275|ref|ZP_01035378.1| putative nitrate transporter [Roseovarius sp. 217]
 gi|85671595|gb|EAQ26453.1| putative nitrate transporter [Roseovarius sp. 217]
          Length = 358

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 16/190 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449
           +IA+++ +P+GI  G  P  ++ + P  Q+        + P+V   VS    + +     
Sbjct: 163 LIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALAASNDGVFAK 222

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +  ++ +   + W  L N   G ++   D   V+    +  W     ++LP   P   
Sbjct: 223 SFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 282

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG +I +  + G   S   +++ VL +  
Sbjct: 283 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARIMVAVLSIGI 336

Query: 565 FVLALNRFLW 574
               L+R ++
Sbjct: 337 IGFLLDRVMY 346



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  VS+  +++ W K   L +P ++P +   + +S+  GW  
Sbjct: 236 LWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 295

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G +I    +      L  I+ A+L++  + FL D++++
Sbjct: 296 LIAAEMLAQN------PGLGKFIWDEFQNGSSSSLARIMVAVLSIGIIGFLLDRVMY 346


>gi|288549732|ref|ZP_05967996.2| nitrate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318071|gb|EFC57009.1| nitrate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 256

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 101 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 152

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 153 PQDYLNVARVLQLSEWTILRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 207



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+I  IP+G  IG     S    P   LL       + P  +  + +  
Sbjct: 67  SLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLP--IGLLLFQK 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 125 AEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFPAVLPA 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G +I       +   +++ ++I+   
Sbjct: 183 VLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENILIAIVIIGVV 236

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 237 GLMLEQGL 244


>gi|152970769|ref|YP_001335878.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895282|ref|YP_002920017.1| nitrate transporter component [Klebsiella pneumoniae NTUH-K2044]
 gi|330009851|ref|ZP_08306609.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955618|gb|ABR77648.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238547599|dbj|BAH63950.1| nitrate transporter component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534712|gb|EGF61275.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 294

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV V   +A++  IP+G  IG     +    P   LL    
Sbjct: 89  YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P  +  + +    P    S  +   + W ++ N   G    P D+  VA    ++
Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
            W   R I+ P + P  +TG   + G AW   + +E+ + G
Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245


>gi|324990295|gb|EGC22233.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK353]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|91776523|ref|YP_546279.1| nitrate transport permease [Methylobacillus flagellatus KT]
 gi|91710510|gb|ABE50438.1| nitrate transport permease [Methylobacillus flagellatus KT]
          Length = 272

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IF IF   +W M  +    + N+ ++   V+R+  +   +K + + +P + P +V  M
Sbjct: 145 SGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAPTIVTGM 204

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +SM   W  +VA+EM+V G       GIG ++        L  +++A+L M+GV+ +  
Sbjct: 205 RISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWNNLSLANVIFAIL-MIGVVGMVL 257

Query: 257 QLLF 260
            + F
Sbjct: 258 DMCF 261



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG  P     + PF Q+L       + P     ++ Y 
Sbjct: 84  SLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMP-----IALYT 138

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +  +    + +IF  + W +L N   G +    ++  VA +  +   R    +ILP   P
Sbjct: 139 IKDSTASGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             VTG   + G AW   + +E+   G      TG+G ++       S   V+  +L++  
Sbjct: 199 TIVTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAILMIGV 252

Query: 565 FVLALN 570
             + L+
Sbjct: 253 VGMVLD 258


>gi|90418329|ref|ZP_01226241.1| permease protein ABC-type glycine/betaine/proline transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90338001|gb|EAS51652.1| permease protein ABC-type glycine/betaine/proline transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 282

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +L++  + +L        AA+   L  +L PILD+MQ+IP   +L   ++ 
Sbjct: 93  EETTETLALVLASTAVCMLIGVPVGVAAARREWLYAILRPILDLMQTIPTFVYLIPALIL 152

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + L PG V     A    I  +++          + + PR L E   +F  +  Q+  
Sbjct: 153 FGLGLVPGLVATVIFALPSPIRLTRL---------GIASTPRQLLEAGDAFGATPMQRLM 203

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 204 TIEIPYALPQIMAGLTQTIMLSLS 227


>gi|221069138|ref|ZP_03545243.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220714161|gb|EED69529.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 330

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P  +  + +  
Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            NP    ++  IF  + W ++ N   G    P D+  VA   +++ W+    I+ P + P
Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253

Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530
           Y +TG   A G AW   + +E+ + G
Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F         GA  AAI+ IF   +W M  +    +  +
Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS W+    +  P  +P ++  + +++   W  +VA+EM+  G
Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279


>gi|170078356|ref|YP_001734994.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC
           7002]
 gi|169886025|gb|ACA99738.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC
           7002]
          Length = 276

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 34/212 (16%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D++Y       ++ RV+    +A II IP+GI +G    I +  +P   ++   PA  F
Sbjct: 81  KDIIY-------SVLRVLTGFSLAVIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAF 133

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+   V Y+ +   +   LL+  GT ++    ++      P +  E  +++ + G R 
Sbjct: 134 IPLL---VLYFGVG-EIPKVLLIFIGTLFFNTLMIMDAVKFVPKELIE--ATYTLGGNR- 186

Query: 494 WRYIILPGIFPYYVTGAITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
              I++  IFPY +   I A       +WN  IVSE+ +       T GLG  I+ +   
Sbjct: 187 -PQIVIKVIFPYILPKIIDAGRVNIAASWNLVIVSELVA------ATEGLGRRISVAQRF 239

Query: 550 GSFPEV--------VLGVLIMCCFVLALNRFL 573
            +  ++        ++G+LI  CF+  L RFL
Sbjct: 240 LNTDQIFAGLIVIGLIGLLIDLCFIW-LQRFL 270



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/203 (19%), Positives = 93/203 (45%), Gaps = 19/203 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+L+   ++++ +     L      +  +  PI+ I++ +P   F+   V+YF    
Sbjct: 86  SVLRVLTGFSLAVIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAFIPLLVLYFGV-- 143

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E+  +  IF   ++  T  +  ++  +P++L E + +   +  Q    +  P+
Sbjct: 144 ------GEIPKVLLIFIGTLFFNTLMIMDAVKFVPKELIEATYTLGGNRPQIVIKVIFPY 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++    ++++  W  V+ SE++   +      G+G  I++A +  +   I +A L 
Sbjct: 198 ILPKIIDAGRVNIAASWNLVIVSELVAATE------GLGRRISVAQRFLNTDQI-FAGLI 250

Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270
           ++G+I L   L F    +W  +F
Sbjct: 251 VIGLIGLLIDLCF----IWLQRF 269


>gi|33860929|ref|NP_892490.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33639661|emb|CAE18830.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 260

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   +A ++ IP+G+ +G      S + P+ QLL         PL    V  +
Sbjct: 72  ISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVS-----PLAWLPVGLF 126

Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               +    + +IF T  W  L N   G ++   D+  V+ S   +     R +ILP I 
Sbjct: 127 VFRNSEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVILPAIM 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G AW   + +E+       L  TG+G +I       S   + + ++I+ 
Sbjct: 187 PNILAGMRISMGTAWLVIVAAEM-------LLGTGIGYFIWNEWNNLSLENIFVAIIIIG 239

Query: 564 CFVLALNRF 572
                L++F
Sbjct: 240 FTGFILDQF 248



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L    +++L       L   S+     L P + +++ +  L +L   +  F N     
Sbjct: 76  RVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAWLPVGLFVFRN----- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +E+  IF IF + +W    +    + +I  D   VS+S   S       + +P  MP
Sbjct: 131 ---SEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVILPAIMP 187

Query: 191 GLVWNMMMSMSGGWFFVVASEMIV 214
            ++  M +SM   W  +VA+EM++
Sbjct: 188 NILAGMRISMGTAWLVIVAAEMLL 211


>gi|308177618|ref|YP_003917024.1| aliphatic sulfonates ABC transporter inner membrane subunit
           [Arthrobacter arilaitensis Re117]
 gi|307745081|emb|CBT76053.1| putative aliphatic sulfonates ABC transporter, inner membrane
           subunit [Arthrobacter arilaitensis Re117]
          Length = 285

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 12/220 (5%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +P  L   SL      +  R LS  VI++L     A L A    L   + P++
Sbjct: 59  PVAVAGKLPELLADGSLVSAVGTSLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLV 118

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPR 163
             MQ +P + ++   ++ F         G   A I+ +     + ++   +   +  IP 
Sbjct: 119 SAMQVLPSIAWVPAAIILF---------GLSDATIYTVLLLGAIPSIINGLLSGIDMIPT 169

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             + +S+    S  +   ++ +P ++PG V  +    +  W  ++A+E+I VG ++    
Sbjct: 170 QYKALSKVLGASKREHILHIELPAALPGYVAGLRQGWAFAWRSLMAAELIAVGGSLA--L 227

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           G+GS +       DL  ++  +LT+L V  L + L F P+
Sbjct: 228 GVGSLLQRGRDLADLPLVMLVILTILLVGVLIELLFFAPI 267



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 16/197 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR +   +IA +I  P+ + +  +P +   + P    +   P+  + P   + +  + 
Sbjct: 82  SLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLVSAMQVLPSIAWVP---AAIILFG 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+ +  +  +++ G    I+  +++G    P  +K ++     +      +I LP   P 
Sbjct: 139 LS-DATIYTVLLLGAIPSIINGLLSGIDMIPTQYKALSKVLGASKREHILHIELPAALPG 197

Query: 506 YVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557
           YV G       AW + + +E +A  G + L   G+G+ +    +    P V+L       
Sbjct: 198 YVAGLRQGWAFAWRSLMAAELIAVGGSLAL---GVGSLLQRGRDLADLPLVMLVILTILL 254

Query: 558 -GVLIMCCFVLALNRFL 573
            GVLI   F   + R L
Sbjct: 255 VGVLIELLFFAPIERKL 271


>gi|294676451|ref|YP_003577066.1| glycine betaine/L-proline ABC transporter permease ProW
           [Rhodobacter capsulatus SB 1003]
 gi|294475271|gb|ADE84659.1| glycine betaine/L-proline ABC transporter, permease protein ProW-1
           [Rhodobacter capsulatus SB 1003]
          Length = 338

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 14/135 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           ++SA V+ +         AA   RL + + PILD+MQ++P   +L   +V+F + + PG 
Sbjct: 160 VISACVVCMSLGVPIGIAAAHRPRLYLAMQPILDLMQTLPTFVYLIPAIVFFGIGMVPGL 219

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +     A +  +  + +  +T   +  +   P+ L E +R+F  +  Q  W + +P+++P
Sbjct: 220 I-----ATVIFVLPAPI-RLT---HLGVSTTPQPLLEAARAFGATPRQVLWKVELPYALP 270

Query: 191 ----GLVWNMMMSMS 201
               GL   +M+S+S
Sbjct: 271 QIMAGLNQTIMLSLS 285


>gi|33596045|ref|NP_883688.1| permease component of ABC transporter [Bordetella parapertussis
           12822]
 gi|33601437|ref|NP_888997.1| permease component of ABC transporter [Bordetella bronchiseptica
           RB50]
 gi|33573048|emb|CAE36690.1| permease component of ABC transporter [Bordetella parapertussis]
 gi|33575873|emb|CAE32951.1| permease component of ABC transporter [Bordetella bronchiseptica
           RB50]
          Length = 255

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV V + + +++ +PVG  +G+   + S I P      A P     PLV   + Y+ +  
Sbjct: 66  RVFVGVCLGTLLAVPVGFVLGWYRGVRSFIDPVINFFRALPPIALIPLV---IVYFGIGE 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +++L  + + +  +  +  G S     F  VA +   T    +R +I+P   P+ +T
Sbjct: 123 TAKIAILF-YASFFAGVIVMYEGISQINPIFVRVAKTLGATDGEIFRKVIVPLTIPHMLT 181

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A G AW   + SE+ +         GLGA I +++       + +G++ +    LA
Sbjct: 182 ALRVALGVAWATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIGFIALA 235

Query: 569 LN 570
           ++
Sbjct: 236 MD 237



 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++  +++P +  +   +VYF        IG E A I  +F +  +     MY+ +  I
Sbjct: 97  PVINFFRALPPIALIPLVIVYFG-------IG-ETAKIAILFYASFFAGVIVMYEGISQI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
                 V+++   +  + F  + VP ++P ++  + +++   W  +VASE+I
Sbjct: 149 NPIFVRVAKTLGATDGEIFRKVIVPLTIPHMLTALRVALGVAWATLVASELI 200


>gi|121607385|ref|YP_995192.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552025|gb|ABM56174.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 266

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   ML   +++ LF  +  T    S      + P L+ ++ +P    L   +  F
Sbjct: 72  FTQATVGHMLQGWLLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPLALSIF 131

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L  G V+       F +    +W +  +    L  +   L EV+R  ++S   + W +
Sbjct: 132 -GLNRGTVL-------FVVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQVWKM 183

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240
           G+P +MP ++  M ++++      VA  + VVG+ +    G+G  I   A A +  D   
Sbjct: 184 GLPNAMPDILAGMRLALT------VALIVAVVGEMIAAQSGLGQAILLAARAFRASD--- 234

Query: 241 ILYAMLTMLGVI-FLYDQLL 259
            L+A + +LG I F+ + LL
Sbjct: 235 -LFAGIALLGGIGFVSNALL 253



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++AS+  + +G  IG  P   + +QP  + +   PA+   PL    +S + LN    L  
Sbjct: 85  LLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPL---ALSIFGLNRGTVL-F 140

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTG 509
           ++ FG  W +L   + G +       EVA    ++ G + W+ + LP   P  + G
Sbjct: 141 VVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQVWK-MGLPNAMPDILAG 195


>gi|116629363|ref|YP_814535.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri ATCC
           33323]
 gi|238854212|ref|ZP_04644557.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri 202-4]
 gi|282850966|ref|ZP_06260340.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus gasseri 224-1]
 gi|311110982|ref|ZP_07712379.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Lactobacillus gasseri
           MV-22]
 gi|116094945|gb|ABJ60097.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri ATCC
           33323]
 gi|238833148|gb|EEQ25440.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri 202-4]
 gi|282557918|gb|EFB63506.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus gasseri 224-1]
 gi|311066136|gb|EFQ46476.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Lactobacillus gasseri
           MV-22]
          Length = 516

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L AMVI++   F+        +++    + I  I+Q+IP L  L   + +        +
Sbjct: 31  LLIAMVIAIPLAFILKG----HKKVAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAI 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           I   L AI  IF +         Y  L +IP +LEE + +F L+ W+K   L +P +MP
Sbjct: 87  IALVLYAIMPIFQN--------TYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMP 137


>gi|251798477|ref|YP_003013208.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546103|gb|ACT03122.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 278

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 18/156 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++A  T   +L+A ++S++       L A+S  L  ++ P+LD+MQ++P   +L   V +
Sbjct: 88  EHAMETLSIVLTASLLSIIIGVPTGILCARSSFLQGIITPLLDLMQTMPAFVYLLPAVSF 147

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F     G V G   + IFA+  T ++ N+       +  +P +L E + +F  +  QK +
Sbjct: 148 F---SLGVVPGVIASIIFAVPPTIRLTNL------GIRQVPVELVEAADAFGSTPNQKLF 198

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            L +P ++P    G+   +M+S+S     VV S MI
Sbjct: 199 KLQLPMALPTMMAGINQTIMLSLS----MVVISSMI 230


>gi|124382344|ref|YP_001025815.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
 gi|238563141|ref|ZP_00439365.2| taurine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|251767713|ref|ZP_02268181.2| taurine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254176599|ref|ZP_04883257.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           10399]
 gi|254201032|ref|ZP_04907397.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254204997|ref|ZP_04911350.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254359116|ref|ZP_04975388.1| taurine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|147748644|gb|EDK55719.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147754583|gb|EDK61647.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148028303|gb|EDK86263.1| taurine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|160697641|gb|EDP87611.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           10399]
 gi|238521308|gb|EEP84761.1| taurine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243061954|gb|EES44140.1| taurine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|261826754|gb|ABM99472.2| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
          Length = 285

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 95  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263

Query: 565 FVLALN 570
             LAL 
Sbjct: 264 IALALE 269



 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 84  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232


>gi|13022190|gb|AAK11681.1|AF342826_2 putative ABC transporter permease [Enterobacter cloacae]
          Length = 268

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 12/202 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            +   LY+ W+   +M RV     +A ++ IP G+ IG    +   + P  QLL   P  
Sbjct: 63  AFSGTLYIHWIK--SMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVT 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL    + ++ + PN  +  L+  G  + I  N   G  +      E A+     G 
Sbjct: 121 AWLPL---SMIFFGVGPNAAI-FLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGP 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +R ++LP   P    G       AW   +V E+           GLGA I +      
Sbjct: 177 SMFRQVVLPAAMPSIFNGLRMGHAIAWFLIVVGEMTG------VPEGLGAAIMDGRMLSR 230

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+ G++++       +R L
Sbjct: 231 TDVVIAGMVVIGLTGFITDRLL 252


>gi|283785488|ref|YP_003365353.1| nitrate transporter permease component [Citrobacter rodentium
           ICC168]
 gi|282948942|emb|CBG88545.1| nitrate transporter permease component [Citrobacter rodentium
           ICC168]
          Length = 291

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 136 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 188 PADYLNVARVLQLSEWTVMRRILFPAVLPAILTGIRLSVGIAWLVIVAAEMLTGG 242



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 18/198 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP+G   G     S    P   LL       + P  +  + +  
Sbjct: 102 SLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAWLP--IGLLLFQK 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 160 AEPAS--SWTIFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTVMRRILFPAVLPA 217

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557
            +TG   + G AW   + +E+ + G       G+G +I       +   +        V+
Sbjct: 218 ILTGIRLSVGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVIIGVV 271

Query: 558 GVLIMCCFVLALNRFLWH 575
           G+L+    +LA  RF W 
Sbjct: 272 GLLLEQGLMLAARRFSWQ 289


>gi|162451030|ref|YP_001613397.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
 gi|161161612|emb|CAN92917.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 307

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D++           L Q+   +  R+L+    +     V   L  +SR     L+P 
Sbjct: 88  APTDVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLPP 147

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L+I++ IP + +L   ++ F +        AEL+ IF  +   ++ +  +    +  +  
Sbjct: 148 LEILRPIPGVAWLPLAILMFPS--------AELSMIFITYMGALFPILIATIHGVGALDP 199

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            L   SRS      + F  + +P ++P +V  M + M   WF +V +EMI
Sbjct: 200 RLIASSRSLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMI 249


>gi|146311970|ref|YP_001177044.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp.
           638]
 gi|145318846|gb|ABP60993.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp.
           638]
          Length = 293

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 190 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+I+ IP+G  IG     S    P   LL       + P  +  + +  
Sbjct: 104 SLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLP--IGLLLFQK 161

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P + P 
Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 219

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557
            +TG   + G AW   + +E+ + G       G+G +I       +   +        V+
Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENILIAIVIIGVV 273

Query: 558 GVLIMCCFVLALNRFLWH 575
           G+L+    +L   RF W 
Sbjct: 274 GLLLEQGLMLIARRFSWQ 291


>gi|227822905|ref|YP_002826877.1| proline/glycine betaine ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341906|gb|ACP26124.1| proline/glycine betaine ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 281

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + T   +L+A  +S+        +AA+   +  ++ PILD+MQ+IP   +L   ++ 
Sbjct: 91  QETTETLALVLAASFVSMAVGVPLGIVAARRAWVYSIMRPILDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +++          + + P  L E + SF  + WQ   
Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPSLVEAAESFGATPWQVLR 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +PF+MP    GL   +M+S+S
Sbjct: 202 KVEIPFAMPQIMAGLTQTIMLSLS 225


>gi|323174961|gb|EFZ60576.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli LT-68]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|42519465|ref|NP_965395.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583753|gb|AAS09361.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329667013|gb|AEB92961.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 515

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L AMVI++   F+        ++     + I  I+Q+IP L  L   + +  +   P  
Sbjct: 31  LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA- 85

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VI   L AI  IF +         Y  L  IP +LEE + +F L+ W+K   L +P +MP
Sbjct: 86  VIALVLYAIMPIFQN--------TYSGLTEIPENLEEAATAFGLTKWKKLQRLEIPMAMP 137

Query: 191 GLVWNMMMSM 200
            +V  + +++
Sbjct: 138 MIVAGIRIAL 147


>gi|160940742|ref|ZP_02088084.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436262|gb|EDP14029.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC
           BAA-613]
          Length = 249

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R +L  L A  +S+L      +LA     +  +L P++ +++S+P+  F+   +++   
Sbjct: 65  ARISLGFLGAFALSILL----GSLAYLFPLVKELLDPVMLLIKSVPVASFVILALIW--- 117

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG+   A+F  F   V  +  S    L +  + L E++R FR+  W++  Y+ V
Sbjct: 118 ------IGSRNLAVFTSFLVVVPMVYVSTLSGLKHTDKKLLEMARVFRMPMWKRIHYIYV 171

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           P  +P LV     ++   W   VA+E+I + +  I
Sbjct: 172 PALLPYLVNGCRTALGMSWKSGVAAEVIGIPEGSI 206



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           + ++G         E+A  F +  W+   YI +P + PY V G  TA G +W + + +EV
Sbjct: 139 STLSGLKHTDKKLLEMARVFRMPMWKRIHYIYVPALLPYLVNGCRTALGMSWKSGVAAEV 198


>gi|255327602|ref|ZP_05368668.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rothia mucilaginosa ATCC 25296]
 gi|255295276|gb|EET74627.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rothia mucilaginosa ATCC 25296]
          Length = 280

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++ + +T R+L    I  +   V   L   S  + ++  P +  ++++P L ++   
Sbjct: 81  ELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGALRAVPSLAWVPLL 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++       KV    + A F ++T+        +  +L ++   L E +R+F L G + 
Sbjct: 141 LLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAHVDPKLVEAARAFGLKGLRL 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F  + +P  +P +V  + ++++  W F+VA+E++
Sbjct: 193 FTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELL 226


>gi|167915554|ref|ZP_02502645.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 112]
          Length = 247

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 57  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 116

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 117 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 172 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 225

Query: 565 FVLALN 570
             LAL 
Sbjct: 226 IALALE 231



 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 46  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 105

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 106 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 157

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 158 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 194


>gi|53716257|ref|YP_106163.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           23344]
 gi|52422227|gb|AAU45797.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           23344]
          Length = 253

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 63  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231

Query: 565 FVLALN 570
             LAL 
Sbjct: 232 IALALE 237



 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 52  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200


>gi|295095647|emb|CBK84737.1| nitrate ABC transporter, permease protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 292

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 137 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 188

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 189 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 243



 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 18/203 (8%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A++  IP+G  IG     S    P   LL       + P  +  
Sbjct: 98  WNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLP--IGL 155

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    ++ W   R I+ P
Sbjct: 156 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTIMRRILFP 213

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555
            + P  +TG   + G AW   + +E+ + G       G+G +I       +   +     
Sbjct: 214 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 267

Query: 556 ---VLGVLIMCCFVLALNRFLWH 575
              V+G+L+    +L   RF W 
Sbjct: 268 IIGVVGLLLEQGLMLIARRFSWQ 290


>gi|83309635|ref|YP_419899.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82944476|dbj|BAE49340.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 368

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 16/202 (7%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452
           ++A+I+ +P+G+  G    I++ + P  Q+        + P+V  V   SY    P    
Sbjct: 173 VLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIVTMVVSASYTSAEPMFEK 232

Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           + L     +   + W  L N   G ++   D   V    ++      R +++P   P+  
Sbjct: 233 AFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPMRTTIRKLVMPSSLPFIF 292

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S  ++++ VL +  
Sbjct: 293 TGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGL 346

Query: 565 FVLALNRFLWHPLYLYGTRCLR 586
               L+R +     L+     R
Sbjct: 347 IGFLLDRVMLACQALFSHSATR 368



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 20/207 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFT 119
           T L  ++  + ++   FV AT+ A         S+ +   L P++ I + +  L +L   
Sbjct: 156 TYLDQIATSLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIV 215

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFT---SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            +     Y       E A + +  T     +W    +    + +I +DL  V R   L  
Sbjct: 216 TMVVSASYTSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPM 275

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE- 235
                 L +P S+P +   M +S+  GW  ++A+EM+         PG+G ++    +  
Sbjct: 276 RTTIRKLVMPSSLPFIFTGMRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNG 329

Query: 236 --QDLLAILYAMLTMLGVIFLYDQLLF 260
             Q L  I+ A+LT+  + FL D+++ 
Sbjct: 330 SSQSLAKIMVAVLTIGLIGFLLDRVML 356


>gi|291459257|ref|ZP_06598647.1| binding-protein-dependent transport system inner membrane component
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418511|gb|EFE92230.1| binding-protein-dependent transport system inner membrane component
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 352

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 14/168 (8%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQW 462
           GI  G+   I+  I+PF +LL A P+  + P+V+       L+ +L+   + I   G  +
Sbjct: 177 GIACGYNQRINYWIEPFMKLLGAIPSTTWIPIVLV------LSASLFRGSVFIIALGVWF 230

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  + I G       + E A +   +G +  + + +P   P    G I A   A  A +
Sbjct: 231 SITLSTITGIRNIDKSYYEAARTLGASGVQLIKNVAIPSAVPSIFQGMIQAMSSACTALL 290

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V+E+          +GLG YI        + ++   ++++C   + +N
Sbjct: 291 VAEMIG------VESGLGWYITWQKSWAEYGKMYGAIILICLIFVGVN 332



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 14/150 (9%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           LL   V       ++R+   + P + ++ +IP   ++   +V   +L+ G V    L   
Sbjct: 170 LLAGLVSGIACGYNQRINYWIEPFMKLLGAIPSTTWIPIVLVLSASLFRGSVFIIALGVW 229

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F+I        T S    + NI +   E +R+   SG Q    + +P ++P +   M+ +
Sbjct: 230 FSI--------TLSTITGIRNIDKSYYEAARTLGASGVQLIKNVAIPSAVPSIFQGMIQA 281

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           MS     ++ +EMI V        G+G YI
Sbjct: 282 MSSACTALLVAEMIGVES------GLGWYI 305


>gi|254449744|ref|ZP_05063181.1| glycine betaine/L-proline transport system permease protein
           [Octadecabacter antarcticus 238]
 gi|198264150|gb|EDY88420.1| glycine betaine/L-proline transport system permease protein
           [Octadecabacter antarcticus 238]
          Length = 447

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 9/164 (5%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS-----IIWIPVG 405
           VV  V I +A++  G  V  FT   + Y+ ++G   +  + V +I A      II IP+G
Sbjct: 219 VVMFVIIVMAYRLAGPRVAIFTAASLAYLAFMGLWELSMITVALIGAGAFLCIIIGIPLG 278

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW G  P   +  +P    +   PA V+    +  ++++       +   +IF     I 
Sbjct: 279 IWFGKSPRAYNIAEPILDFMQTMPAFVYL---IPIIAFFGTGKPPGVLATLIFAMPPVIR 335

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + G    P   KE A++F  + W+    + LP   P  +TG
Sbjct: 336 LTAL-GMRGVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTG 378



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            KS R   +  PILD MQ++P   +L   + +F    P  V+   + A+  +       M
Sbjct: 282 GKSPRAYNIAEPILDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIFAMPPVIRLTALGM 341

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                     +P   +E + +F  S WQ    + +P ++P    G+   ++MS+S     
Sbjct: 342 R--------GVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTGINQTILMSLS----- 388

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIK 234
                M+V+  ++I   G+G+ I  A++
Sbjct: 389 -----MVVIA-SLIGAEGLGALILEALQ 410


>gi|209918186|ref|YP_002292270.1| alkanesulfonate transporter permease subunit [Escherichia coli
           SE11]
 gi|209911445|dbj|BAG76519.1| sulfonate ABC transporter permease component [Escherichia coli
           SE11]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|20088963|ref|NP_615038.1| sulfonate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
 gi|19913811|gb|AAM03518.1| sulfonate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
          Length = 262

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++I++ IP L ++ F +V+F   +         AA F +F   ++ +  + Y    N+
Sbjct: 100 PIIEILRPIPPLAWIPFAIVWFGLTHQ--------AAGFVVFVGMIFPIIINTYTGFKNV 151

Query: 162 PRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           PR   E ++    +       ++ +P +MP +   + ++M  GW  +VA+EM  V +
Sbjct: 152 PRVYVEAAKVLGCTRNIDLIRFVAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSN 208


>gi|45358430|ref|NP_987987.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|44921188|emb|CAF30423.1| ABC-type proline/glycine betaine transport system, permease
           component related protein [Methanococcus maripaludis S2]
          Length = 277

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 17/184 (9%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++++ +I+LL       + A+S+ +  +L P+LD+MQ++P L +L   V++F     G+V
Sbjct: 97  IITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFF---GIGEV 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G     IFA+       +T    + + N   +L EV R+F  + WQ    + +P ++P 
Sbjct: 154 PGVIATVIFAM--PPAIKLTALGIEQVSN---ELIEVGRAFGGTSWQILTKIELPTAVPS 208

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTML 249
           ++  +  ++   +  VV +  I  G       G+G  I   I+   L   L A   +T L
Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261

Query: 250 GVIF 253
            VIF
Sbjct: 262 AVIF 265


>gi|313890394|ref|ZP_07824025.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121237|gb|EFR44345.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 575

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS  +  ++ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            GA  + IFA+  T +  N+  S      NI  +L E S +F  +  QK   + +P +  
Sbjct: 158 PGAFASVIFALPPTVRFTNLGIS------NISTELVEASDAFGSTPRQKLLKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADV 252


>gi|298292114|ref|YP_003694053.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296928625|gb|ADH89434.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 284

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 33/182 (18%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           R T++ L  +++S LF           AA S+R   V+ P LD+MQ++P   +L   + +
Sbjct: 89  RATMQSLVLVLVSTLFALAIGIPIGIGAALSKRFWRVVAPALDMMQTMPSFVYLIPAIPF 148

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQK 179
           F            L A+ A F + V+ M  ++  +   I   P  L E + +F  S WQK
Sbjct: 149 F-----------GLGAVSACFATIVFAMPPTIRLTALGILETPSQLVEAADAFGSSRWQK 197

Query: 180 FWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            + + +P ++P    G+   +M+++S     VV + MI  G       G+G  +  AI+ 
Sbjct: 198 LFKVQLPLAIPTIMAGINQTIMLALS----MVVIAAMIGAG-------GLGGEVWKAIQR 246

Query: 236 QD 237
            +
Sbjct: 247 LE 248


>gi|108804393|ref|YP_644330.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108765636|gb|ABG04518.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 288

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 12/134 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A  ++L+       +AAKSR +  VL P+LD MQ++P   +L   +V          
Sbjct: 101 VIAATAVALVVGIPLGIVAAKSRDVETVLRPVLDFMQTMPAFVYLVPAIVLLG------- 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           +GA  A +  +  +    +  +M   L  + ++  E + +F  +GWQ    + +P +MP 
Sbjct: 154 LGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMPT 212

Query: 191 ---GLVWNMMMSMS 201
              G+   +M+S+S
Sbjct: 213 IMAGVNQVIMLSLS 226



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  V+    +A ++ IP+GI       + + ++P    +   PA V+    V  +   
Sbjct: 96  LTLALVIAATAVALVVGIPLGIVAAKSRDVETVLRPVLDFMQTMPAFVYL---VPAIVLL 152

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     L  ++IF     +   ++ G      +  E AS+F  TGW+  R + LP   P
Sbjct: 153 GLGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMP 211

Query: 505 YYVTG 509
             + G
Sbjct: 212 TIMAG 216


>gi|293414214|ref|ZP_06656863.1| ssuC [Escherichia coli B185]
 gi|291434272|gb|EFF07245.1| ssuC [Escherichia coli B185]
          Length = 264

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|261251605|ref|ZP_05944179.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
 gi|260938478|gb|EEX94466.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
          Length = 299

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  L + V         A+S R+  V+ P+LD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTLLSIVLGIPIGIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E S +F  S  Q+ +
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGASAKQRLF 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MMS+S          M+V+  ++I + G+G  +  AI  Q
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMSLS----------MVVIA-SMIGVKGLGQPVLKAITNQ 259


>gi|237731765|ref|ZP_04562246.1| nitrate ABC transporter [Citrobacter sp. 30_2]
 gi|226907304|gb|EEH93222.1| nitrate ABC transporter [Citrobacter sp. 30_2]
          Length = 291

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 136 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 188 PDDYLNVARVLQLSEWTVMRRILFPAVLPAILTGVRLSIGIAWLVIVAAEMLTGG 242



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP+G  IG     S    P   LL       + P  +  + +  
Sbjct: 102 SLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIALLRPVSPLAWLP--IGLLLFQK 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P+D+  VA    ++ W   R I+ P + P 
Sbjct: 160 AEPAS--SWTIFICSIWPMVINTAEGVRRIPDDYLNVARVLQLSEWTVMRRILFPAVLPA 217

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+ + G       G+G +I       +   +++ ++I+   
Sbjct: 218 ILTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVIIGVV 271

Query: 566 VLALNRFL 573
            L L + L
Sbjct: 272 GLLLEQGL 279


>gi|297521440|ref|ZP_06939826.1| alkanesulfonate transporter permease subunit [Escherichia coli
           OP50]
          Length = 246

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 84  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 135

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 136 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 189

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 190 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 245


>gi|251789284|ref|YP_003004005.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247537905|gb|ACT06526.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ S +T R L+   I          +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLSISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI   L E++RS+ LSG++ F  
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDGGLLEMARSYGLSGFRLFRE 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  S+   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VVLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTML 249
               ILYA+L  L
Sbjct: 225 VVAIILYALLGKL 237



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 21/203 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +    I   + + +G   G        +    Q+L   P     PLV+    +
Sbjct: 63  SISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++G+R +R ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G  W   IV+E  S       ++G+G Y+A +  +    +VV+  +I+ 
Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231

Query: 564 CFV--------LALNR--FLWHP 576
             +        L L R    WHP
Sbjct: 232 ALLGKLADVIALTLERIWLRWHP 254


>gi|227502579|ref|ZP_03932628.1| nitrate ABC transporter permease protein [Corynebacterium accolens
           ATCC 49725]
 gi|227076741|gb|EEI14704.1| nitrate ABC transporter permease protein [Corynebacterium accolens
           ATCC 49725]
          Length = 293

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AMVI++   F   + A   R       P + I++ +  L +L   +    +        A
Sbjct: 117 AMVIAIPLGFWLGSSATFRR----ATDPFVQILRPVSPLAWLPLGLALLRD--------A 164

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E  A+F I  S +W    +  +++  I    + ++ +   +  Q+  Y+  P ++PG++ 
Sbjct: 165 ENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGIIT 224

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTV 219
            M  S+S  W  +VA+EM+V G  V
Sbjct: 225 GMRQSLSTAWLVIVAAEMLVGGQGV 249



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 7/169 (4%)

Query: 361 WQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           W     I++   Y+D    + + W    ++ RV++   IA +I IP+G W+G        
Sbjct: 78  WDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRA 137

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             PF Q+L       + PL ++ +             ++I    W  L N I        
Sbjct: 138 TDPFVQILRPVSPLAWLPLGLALLRDAENTA----VFVIILSALWPTLLNTIEAVRGIHP 193

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +K +A++      +   YI+ P   P  +TG   +   AW   + +E+
Sbjct: 194 TYKNLAATLGTNRMQQLLYIVGPAALPGIITGMRQSLSTAWLVIVAAEM 242


>gi|146309344|ref|YP_001189809.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145577545|gb|ABP87077.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 276

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 8/176 (4%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +   P  +   + +      L ++ + + LR+ +   I      V  T    SRR    
Sbjct: 50  HQMPAPSQVAQTLYLLAQSGELWRHLNASLLRVSAGFAIGAALAIVIGTWVGLSRRAEAY 109

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P    +++IP L ++   +++       K++   L A F ++         ++   + 
Sbjct: 110 LEPTFQALRAIPSLAWVPLLLLWLGIDETPKIVLIALGAFFPVY--------LALLAGIR 161

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           NI R L EV R + LS       + +P ++P L   +  ++S  W F+VA+E+I  
Sbjct: 162 NIDRKLVEVGRLYGLSSLALVRRILLPAALPSLFTGLRGALSLSWMFLVAAELIAA 217



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 11/169 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     I + + I +G W+G      + ++P  Q L A P+  + PL++  +    
Sbjct: 78  SLLRVSAGFAIGAALAIVIGTWVGLSRRAEAYLEPTFQALRAIPSLAWVPLLLLWLGIDE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   +L+  G  + +   ++AG         EV   + ++     R I+LP   P 
Sbjct: 138 -TPKI---VLIALGAFFPVYLALLAGIRNIDRKLVEVGRLYGLSSLALVRRILLPAALPS 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             TG   A   +W   + +E+ +       T GLG  +++  E  S P+
Sbjct: 194 LFTGLRGALSLSWMFLVAAELIA------ATRGLGYLLSDGRET-SRPD 235


>gi|126447555|ref|YP_001077898.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
 gi|126240409|gb|ABO03521.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
          Length = 283

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|222080828|ref|YP_002540191.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
 gi|221725507|gb|ACM28596.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
          Length = 280

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 20/184 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   + P L  ++SIP + ++   +++F      KV    +   F ++         
Sbjct: 113 ARRL---IDPSLQALRSIPSIAWVPLFILWFGIFEASKVALIAVGVFFPVY--------L 161

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++ ++ R + EV R FRLSG+     + +P   P  V  +   +  GW FVVA+E 
Sbjct: 162 GVSGAILSVDRKIVEVGRIFRLSGFALVRRVMLPAVFPAYVTALRSGLGLGWMFVVAAEF 221

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
           +   +      G+G  +    +      I+ A++T   +  L D LL     P + W + 
Sbjct: 222 MGASE------GLGYLLVDGQQMGKPDQIMAAIITFAVIGKLTDSLLLAVTAPFLTWQDS 275

Query: 270 FRLE 273
           +R E
Sbjct: 276 YRRE 279


>gi|42782116|ref|NP_979363.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42738040|gb|AAS41971.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 274

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 19/162 (11%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+    I++G ++  RV+   I+ + + IPVG+ IG  P + +   P    +   P   F
Sbjct: 70  QNGSLFIYIG-VSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAF 128

Query: 434 FPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             L +           LW  +       L+ + T + +  N I G  A   D    A S 
Sbjct: 129 ITLFM-----------LWFGIGEQSKIFLITYATFFIVTINTITGVQAVEEDKIRSARSM 177

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             + W+   ++I+P   PY  TGA  A G ++ A + +E+ +
Sbjct: 178 GASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVA 219



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L F+T  +++F        IG E + IF I  +  + +T +    +  +
Sbjct: 115 PVINFIRFIPPLAFITLFMLWFG-------IG-EQSKIFLITYATFFIVTINTITGVQAV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
             D    +RS   S WQ  +++ +P ++P +     ++M   +  +V +EM+   + +
Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVAANEGI 224


>gi|24379568|ref|NP_721523.1| putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|290580431|ref|YP_003484823.1| putative phosphate ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377513|gb|AAN58829.1|AE014950_12 putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|254997330|dbj|BAH87931.1| putative phosphate ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 311

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P+++++  IP  + GF+   +V  +  +++ G   G  L+ +F +F   +  +TF  
Sbjct: 124 ILQPVVELLVGIPSVVYGFIGLQIVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAAKPGIFTAVVFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               VIP
Sbjct: 243 GNSAVIP 249


>gi|333008921|gb|EGK28381.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-272]
 gi|333020231|gb|EGK39501.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-227]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|218548450|ref|YP_002382241.1| alkanesulfonate transporter permease subunit [Escherichia
           fergusonii ATCC 35469]
 gi|218355991|emb|CAQ88607.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALDLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|134045712|ref|YP_001097198.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
 gi|132663337|gb|ABO34983.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
          Length = 277

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++++ +I+LL       + A+S+ + M+L P+LD+MQ++P L +L   V++F     G+V
Sbjct: 97  IITSTLIALLLGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFF---GIGEV 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G     IFA+    +   +  + Q    +  +L EV ++F  + WQ    + +P ++P 
Sbjct: 154 PGVIATVIFAM-PPAIKLTSLGIEQ----VSGELIEVGKAFGGTSWQILTKIELPTAVPS 208

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTML 249
           ++  +  ++   +  VV +  I  G       G+G  I   I+   L   L A   +T L
Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261

Query: 250 GVIF 253
            VIF
Sbjct: 262 AVIF 265


>gi|126458607|ref|YP_001076166.1| taurine ABC transporter permease [Burkholderia pseudomallei 1106a]
 gi|242311082|ref|ZP_04810099.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|126232375|gb|ABN95788.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|242134321|gb|EES20724.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
          Length = 283

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|218700547|ref|YP_002408176.1| alkanesulfonate transporter permease subunit [Escherichia coli
           IAI39]
 gi|218370533|emb|CAR18340.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPTYHLKEAT 262


>gi|217425152|ref|ZP_03456647.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217391757|gb|EEC31784.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 285

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 95  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263

Query: 565 FVLALN 570
             LAL 
Sbjct: 264 IALALE 269



 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 84  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232


>gi|53722593|ref|YP_111578.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|226195983|ref|ZP_03791569.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|52213007|emb|CAH39045.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|225931876|gb|EEH27877.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 285

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 95  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263

Query: 565 FVLALN 570
             LAL 
Sbjct: 264 IALALE 269



 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 84  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232


>gi|33594562|ref|NP_882206.1| putative transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|33564638|emb|CAE43960.1| putative transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|332383973|gb|AEE68820.1| putative transport system permease protein [Bordetella pertussis
           CS]
          Length = 265

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++F  +V   I  +  +P G++ G+   + + + P    +   P   F P+    V Y+ 
Sbjct: 75  SLFCALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPM---AVLYFG 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFP 504
           L   +   +L++F    Y   +  AGA + P  +   A S  +T  + +WR ++ P   P
Sbjct: 132 LG-EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWR-VVFPSSIP 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TG   A   +W   + +E+           GLG  I+++ +    P V +G+ ++  
Sbjct: 190 HIFTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGL 243

Query: 565 FVLALNRFL 573
             L LN  L
Sbjct: 244 IGLVLNVML 252



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I +L    +   +   + +G ++ PI+  ++ IP + F+   V+YF     GKV+
Sbjct: 80  LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLGEMGKVV 139

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                    +FT+  +N +F   Q+   ++P      + S  ++  Q FW +  P S+P 
Sbjct: 140 -------LIVFTA--FNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSIPH 190

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           +   + ++M+  W  VVA+E++
Sbjct: 191 IFTGLKVAMALSWAVVVAAELV 212


>gi|15800795|ref|NP_286809.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 EDL933]
 gi|15830271|ref|NP_309044.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. Sakai]
 gi|168762926|ref|ZP_02787933.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|217326045|ref|ZP_03442129.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|12514109|gb|AAG55419.1|AE005283_6 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360476|dbj|BAB34440.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|189366792|gb|EDU85208.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|209774658|gb|ACI85641.1| putative transport system permease protein [Escherichia coli]
 gi|209774660|gb|ACI85642.1| putative transport system permease protein [Escherichia coli]
 gi|209774664|gb|ACI85644.1| putative transport system permease protein [Escherichia coli]
 gi|217322266|gb|EEC30690.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|326346148|gb|EGD69886.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. 1044]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|27377947|ref|NP_769476.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351093|dbj|BAC48101.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 269

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 16/190 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT   +   ++S LF    A L A S+ +   + P+L   QS+P +      VV+F    
Sbjct: 70  TTYATVCGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGI 129

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KVI A L   F +  S V        Q   ++  D+ +++R+ + S +Q F  + +P 
Sbjct: 130 IPKVISAFLLGFFPVVVSAV--------QGFKSVDPDMVDLARAMQGSRFQVFRAVNLPH 181

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-- 245
           ++P +   + +S++      +A    VVG+ V    GIG  +  +I   DL  +  A+  
Sbjct: 182 ALPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVI 235

Query: 246 LTMLGVIFLY 255
           L +LGV+  +
Sbjct: 236 LALLGVVLFW 245


>gi|323947277|gb|EGB43285.1| inner membrane transport system [Escherichia coli H120]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|320181997|gb|EFW56902.1| Alkanesulfonates transport system permease protein [Shigella boydii
           ATCC 9905]
          Length = 242

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 80  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 131

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 132 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 185

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 186 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 241


>gi|229587925|ref|YP_002870044.1| putative histidine ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359791|emb|CAY46641.1| putative histidine ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 283

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   M+ A VIS+L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|110804943|ref|YP_688463.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110614491|gb|ABF03158.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|332759022|gb|EGJ89332.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 4343-70]
 gi|332760120|gb|EGJ90418.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 2747-71]
 gi|332762707|gb|EGJ92970.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-671]
 gi|332767721|gb|EGJ97912.1| ssuC [Shigella flexneri 2930-71]
 gi|333006195|gb|EGK25704.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-218]
 gi|333019980|gb|EGK39251.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-304]
          Length = 217

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 55  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 216


>gi|300937718|ref|ZP_07152520.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457279|gb|EFK20772.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 264

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|15966153|ref|NP_386506.1| putative glycine betaine transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|19880074|gb|AAM00245.1|AF360731_2 ProW [Sinorhizobium meliloti]
 gi|15075423|emb|CAC46979.1| Putative choline ABC transporter, permease component [Sinorhizobium
           meliloti 1021]
          Length = 281

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + T   +L+A  +S+     +   AA+   +  ++ PILD+MQ+IP   +L   ++ 
Sbjct: 91  QETTETLALVLAATFVSMAVGVPFGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +++          + + P  L E + SF  + WQ   
Sbjct: 151 FGLGVVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +PF+MP    GL   +M+S+S
Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225


>gi|194434390|ref|ZP_03066653.1| putative sulfonate ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|300921026|ref|ZP_07137413.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|331651956|ref|ZP_08352975.1| putative transport system permease protein [Escherichia coli M718]
 gi|194417374|gb|EDX33480.1| putative sulfonate ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|300412017|gb|EFJ95327.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|331050234|gb|EGI22292.1| putative transport system permease protein [Escherichia coli M718]
          Length = 264

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|167828808|ref|ZP_02460279.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167898868|ref|ZP_02486269.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|254186901|ref|ZP_04893417.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254264574|ref|ZP_04955439.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254301413|ref|ZP_04968857.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157811362|gb|EDO88532.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157934585|gb|EDO90255.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254215576|gb|EET04961.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 283

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|74311492|ref|YP_309911.1| alkanesulfonate transporter permease subunit [Shigella sonnei
           Ss046]
 gi|89107784|ref|AP_001564.1| alkanesulfonate transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|90111188|ref|NP_415454.4| putative alkanesulfonate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|157155333|ref|YP_001462155.1| alkanesulfonate transporter permease subunit [Escherichia coli
           E24377A]
 gi|157160456|ref|YP_001457774.1| alkanesulfonate transporter permease subunit [Escherichia coli HS]
 gi|170020664|ref|YP_001725618.1| alkanesulfonate transporter permease subunit [Escherichia coli ATCC
           8739]
 gi|170080592|ref|YP_001729912.1| alkanesulfonate ABC transporter membrane protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188495708|ref|ZP_03002978.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 53638]
 gi|191166966|ref|ZP_03028789.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B7A]
 gi|193064670|ref|ZP_03045749.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E22]
 gi|193071686|ref|ZP_03052588.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E110019]
 gi|194428405|ref|ZP_03060946.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B171]
 gi|194438699|ref|ZP_03070786.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 101-1]
 gi|218553521|ref|YP_002386434.1| alkanesulfonate transporter permease subunit [Escherichia coli
           IAI1]
 gi|218694409|ref|YP_002402076.1| alkanesulfonate transporter permease subunit [Escherichia coli
           55989]
 gi|238900192|ref|YP_002925988.1| alkanesulfonate transporter subunit [Escherichia coli BW2952]
 gi|253774037|ref|YP_003036868.1| alkanesulfonate transporter permease subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161048|ref|YP_003044156.1| alkanesulfonate transporter permease [Escherichia coli B str.
           REL606]
 gi|256018807|ref|ZP_05432672.1| alkanesulfonate transporter permease subunit [Shigella sp. D9]
 gi|256023364|ref|ZP_05437229.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           4_1_40B]
 gi|260843184|ref|YP_003220962.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260854226|ref|YP_003228117.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|293433231|ref|ZP_06661659.1| ssuC [Escherichia coli B088]
 gi|301022456|ref|ZP_07186335.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|307137564|ref|ZP_07496920.1| alkanesulfonate transporter permease subunit [Escherichia coli
           H736]
 gi|307311679|ref|ZP_07591319.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|312971065|ref|ZP_07785244.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1827-70]
 gi|332279885|ref|ZP_08392298.1| alkanesulfonate transporter subunit [Shigella sp. D9]
 gi|3915972|sp|P75851|SSUC_ECOLI RecName: Full=Putative aliphatic sulfonates transport permease
           protein ssuC
 gi|4583569|emb|CAB40392.1| putative aliphatic sulfonate transport membrane component
           [Escherichia coli]
 gi|73854969|gb|AAZ87676.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|85674791|dbj|BAA35689.2| alkanesulfonate transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|87081802|gb|AAC74020.2| putative alkanesulfonate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|157066136|gb|ABV05391.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli HS]
 gi|157077363|gb|ABV17071.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E24377A]
 gi|169755592|gb|ACA78291.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169888427|gb|ACB02134.1| alkanesulfonate transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188490907|gb|EDU66010.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 53638]
 gi|190902960|gb|EDV62686.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B7A]
 gi|192927727|gb|EDV82342.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E22]
 gi|192955010|gb|EDV85511.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E110019]
 gi|194413620|gb|EDX29901.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B171]
 gi|194422331|gb|EDX38331.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 101-1]
 gi|218351141|emb|CAU96845.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360289|emb|CAQ97839.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|238859959|gb|ACR61957.1| alkanesulfonate transporter subunit [Escherichia coli BW2952]
 gi|242376749|emb|CAQ31462.1| ssuC, subunit of aliphatic sulfonate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325081|gb|ACT29683.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972949|gb|ACT38620.1| alkanesulfonate transporter subunit [Escherichia coli B str.
           REL606]
 gi|253977163|gb|ACT42833.1| alkanesulfonate transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752875|dbj|BAI24377.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|257758331|dbj|BAI29828.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260449920|gb|ACX40342.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|291324050|gb|EFE63472.1| ssuC [Escherichia coli B088]
 gi|299881219|gb|EFI89430.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|306908234|gb|EFN38733.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|309701210|emb|CBJ00510.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Escherichia coli ETEC H10407]
 gi|310336826|gb|EFQ01993.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1827-70]
 gi|315060219|gb|ADT74546.1| alkanesulfonate transporter subunit [Escherichia coli W]
 gi|315135582|dbj|BAJ42741.1| alkanesulfonate transporter permease subunit [Escherichia coli DH1]
 gi|315619130|gb|EFU99710.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 3431]
 gi|320202332|gb|EFW76903.1| Alkanesulfonates transport system permease protein [Escherichia
           coli EC4100B]
 gi|323157173|gb|EFZ43296.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli EPECa14]
 gi|323165408|gb|EFZ51195.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella sonnei 53G]
 gi|323175440|gb|EFZ61035.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1180]
 gi|323379221|gb|ADX51489.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|323938040|gb|EGB34302.1| inner membrane transport system [Escherichia coli E1520]
 gi|323942850|gb|EGB39015.1| inner membrane transport system [Escherichia coli E482]
 gi|323962926|gb|EGB58500.1| inner membrane transport system [Escherichia coli H489]
 gi|323973191|gb|EGB68383.1| inner membrane transport system [Escherichia coli TA007]
 gi|324117201|gb|EGC11109.1| inner membrane transport system [Escherichia coli E1167]
 gi|332092532|gb|EGI97605.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella boydii 5216-82]
 gi|332095894|gb|EGJ00901.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 155-74]
 gi|332102237|gb|EGJ05583.1| alkanesulfonate transporter subunit [Shigella sp. D9]
 gi|332342378|gb|AEE55712.1| aliphatic sulfonates transport permease protein SsuC [Escherichia
           coli UMNK88]
          Length = 263

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|255015584|ref|ZP_05287710.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_7]
          Length = 274

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+  ++L+         A S     +L P+LD MQ++P   +L   V++
Sbjct: 83  EETMQTLALVLSSTGMALMLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLF 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V GA    IFA+    V  +T      L  +P+++EE +RSF  +  Q  + 
Sbjct: 143 F---GLGTVPGAFATIIFAL--PPVARLT---ALGLRQVPKNVEEAARSFGATPVQLLFK 194

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +P ++P    G+   +MMS+S     VV + MI  G 
Sbjct: 195 VELPLALPTILAGVNQTIMMSLS----MVVVAAMISAGG 229


>gi|229821916|ref|YP_002883442.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229567829|gb|ACQ81680.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 301

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L QY + +T R+L    I  L      ++   SR    +  P L   +++P L ++   V
Sbjct: 98  LGQYVAISTQRVLIGFAIGGLLGLAVGSVVGLSRLSAALFAPTLAGARAVPSLAWVPLLV 157

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       KVI   + A F ++T        ++  +L ++   L E  R++ L G +  
Sbjct: 158 LWIGINEDSKVILIAIGAFFPVYT--------TVAGALRHVDPHLVEAGRAYGLCGPRLL 209

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             + +P  +P +V  + ++++  W F+VA+E++
Sbjct: 210 ARVQLPAVVPAVVSGLRLALAQAWLFLVAAELL 242


>gi|206560415|ref|YP_002231179.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036456|emb|CAR52352.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 291

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A+   I +G+ IG    +   + P  ++L   PA  + PL +       
Sbjct: 96  SITRVLAGFVAAAFAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + GA A        A S    G   +  +ILPG  
Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G AW   + +E+ +  +      G+G +  ES    ++P++V+G+ ++
Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/171 (19%), Positives = 70/171 (40%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+   +   L    LP +   +  R+L+  V +            + R L   L+P 
Sbjct: 72  APADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAGIGLGLAIGRYRALEDTLLPP 131

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +  +       +  
Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            L   +RS    G   +  + +P + P +   + + M   WF +V +EMI 
Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234


>gi|187729719|ref|YP_001837308.1| binding-protein-dependent transport-like protein [Acidithiobacillus
           caldus]
 gi|167782104|gb|ACA00175.1| binding-protein-dependent transport-like protein [Acidithiobacillus
           caldus]
          Length = 230

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R+  A  I  +           S  L  ++ P L+I++ IP + ++   ++    ++
Sbjct: 41  SMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEILRPIPAIAWVPMAIL----MW 96

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P      E + IF  F   V+ +  + +  +  +P +L + +RS         + + +P+
Sbjct: 97  PS----TEESIIFITFLGAVFPIALNTWDGVRRVPYELIKAARSLGAKKTSVLFNVVIPY 152

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
           ++P +   M + M G WF ++A EMI
Sbjct: 153 AIPNITVGMALGMGGAWFALLAGEMI 178



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           ++D+L+       +M R+ V   I +I+ I VG+ +G+   + + I P+ ++L   PA  
Sbjct: 35  WKDILW-------SMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEILRPIPAIA 87

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           + P+ +       + P+   S++ I   G  + I  N   G    P +  + A S     
Sbjct: 88  WVPMAI------LMWPSTEESIIFITFLGAVFPIALNTWDGVRRVPYELIKAARSLGAKK 141

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 +++P   P    G     GGAW A +  E+ S G       G+G +  ES E  
Sbjct: 142 TSVLFNVVIPYAIPNITVGMALGMGGAWFALLAGEMIS-GRF-----GIGYFTWESYELI 195

Query: 551 SFPEVVLGVL 560
            +  +++G++
Sbjct: 196 QYGNIIVGMV 205


>gi|167836748|ref|ZP_02463631.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 272

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++ N  L  L+  G  + +  N   G  +   D  E+
Sbjct: 112 QMIRNIPALAMIPLVIL---WFGIDENAKL-FLVALGVFFPVYINTYHGIRSVDADLVEM 167

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 168 ARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 221

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G   
Sbjct: 222 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRWHPAYQPGADA 272


>gi|239928415|ref|ZP_04685368.1| putative ABC transporter [Streptomyces ghanaensis ATCC 14672]
 gi|291436742|ref|ZP_06576132.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339637|gb|EFE66593.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 262

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+ +G  P +    +P  + + A P+    P+++  +       +    + + F + W 
Sbjct: 81  LGLALGSVPALEDATRPLVEFMRALPSVALLPIMMLLLG----TDDDMKVITIAFVSTWP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +      +VA+ + ++ W   R++++P   P    GA  A   +  A ++
Sbjct: 137 ILLNTVEGVRSVDPVLHQVAAGYRLSAWHRIRHLVVPAAMPQIFAGARVALSMSVVAMVL 196

Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +E V S G       GLG ++ +S        +  G++++     A N+
Sbjct: 197 TEMVGSPG-------GLGYFVLDSQRTFDIVAMWTGLIVLGLIGYAANK 238


>gi|2642138|gb|AAB86903.1| nitrate transporter component [Klebsiella oxytoca]
          Length = 294

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 191 PEDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV V   +A++  IP+G  IG     +    P   LL    
Sbjct: 89  YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P  +  + +    P    S  +   + W ++ N   G    P D+  VA    ++
Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPEDYLNVARVLQLS 204

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
            W   R I+ P + P  +TG   + G AW   + +E+ + G
Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245


>gi|317486678|ref|ZP_07945495.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922061|gb|EFV43330.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 258

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R++   V++         L   S+    ++ P+ +IM+ +P L ++   V+++    
Sbjct: 67  SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVIFWPT-- 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E++ +F  F    + +  ++   + +I       +RS   S    FW++ +P 
Sbjct: 125 ------PEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPG 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
           S+P +V  M + M   W  VVA+EMI
Sbjct: 179 SLPSIVVGMTVGMGVTWAVVVAAEMI 204



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+V   ++A  I IP+G+ +G      + I P  +++   P   + P+ V     + 
Sbjct: 67  SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAV----IFW 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + +  +   G  + ++ N++ G  +    +   A S   +    + +I+LPG  P 
Sbjct: 123 PTPEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPS 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            V G     G  W   + +E+ +        TGLG     +   G FP
Sbjct: 183 IVVGMTVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224


>gi|254975037|ref|ZP_05271509.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-66c26]
 gi|255092426|ref|ZP_05321904.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile CIP 107932]
 gi|255314165|ref|ZP_05355748.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-76w55]
 gi|255649944|ref|ZP_05396846.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-37x79]
 gi|260683098|ref|YP_003214383.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile CD196]
 gi|260686696|ref|YP_003217829.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile R20291]
 gi|260209261|emb|CBA62574.1| putative aliphatic sulfonate ABC transporter, permease protein
           [Clostridium difficile CD196]
 gi|260212712|emb|CBE03807.1| putative aliphatic sulfonate ABC transporter, permease protein
           [Clostridium difficile R20291]
          Length = 256

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++          
Sbjct: 65  RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LW  +       ++I  + + I  N + G     N   EV  SF+++  R +  II+P 
Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 173

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ +
Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227

Query: 562 M 562
           +
Sbjct: 228 I 228


>gi|254472307|ref|ZP_05085707.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
 gi|211958590|gb|EEA93790.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
          Length = 289

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 15/196 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +T   +L A+ IS++       ++A+S R   +L P+LD+MQ+IP   +L    + 
Sbjct: 93  EKAMQTVAILLVAVFISVIIGVPLGVISARSNRFRALLNPVLDLMQTIPSFVYLIPAAML 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     GKV      AI A        +       +  +  ++ E SR+F  + WQ    
Sbjct: 153 F---GLGKV-----PAILATVIYAAPPLIRLTDLGIRYVDAEVVEASRAFGATRWQILKG 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  +M      ++A  M+V+  ++I   G+G  + L ++  D    L
Sbjct: 205 VQIPLALPSIMQGINQTM------MMALAMVVIA-SMIGARGVGETVLLGLQRNDAGQGL 257

Query: 243 YAMLTMLGVIFLYDQL 258
              L ++ +  ++D++
Sbjct: 258 LGGLAIVVLAVVFDRI 273


>gi|167923398|ref|ZP_02510489.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|167820438|ref|ZP_02452118.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 91]
          Length = 255

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 65  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 124

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 125 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 180 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 233

Query: 565 FVLALN 570
             LAL 
Sbjct: 234 IALALE 239



 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 54  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 113

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 114 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 165

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 166 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 202


>gi|159186005|ref|NP_356598.2| ABC transporter, membrane spanning protein (glycine betaine)
           [Agrobacterium tumefaciens str. C58]
 gi|159141139|gb|AAK89383.2| ABC transporter, membrane spanning protein (glycine betaine)
           [Agrobacterium tumefaciens str. C58]
          Length = 295

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 25/187 (13%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+S++         A+S RL  V+ P+LD+MQ++P   +L   V   M L  G+V G   
Sbjct: 112 VMSIVIGLPIGIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVV---MLLGIGRVPGVIA 168

Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191
             I+AI    ++ N+   M      +  D+ E + +F  S  QK + + +P ++P    G
Sbjct: 169 VIIYAIPPMIRLTNLGIRM------VDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAG 222

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +MM+++          M+V+  ++I + G+G  +  AI  Q     ++  L ++G+
Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGI 271

Query: 252 IFLYDQL 258
             ++D++
Sbjct: 272 AIIFDRI 278


>gi|82777542|ref|YP_403891.1| alkanesulfonate transporter permease subunit [Shigella dysenteriae
           Sd197]
 gi|168751200|ref|ZP_02776222.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168757029|ref|ZP_02782036.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|168769932|ref|ZP_02794939.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168776210|ref|ZP_02801217.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168783972|ref|ZP_02808979.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787366|ref|ZP_02812373.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168802784|ref|ZP_02827791.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC508]
 gi|195939651|ref|ZP_03085033.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808290|ref|ZP_03250627.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208815207|ref|ZP_03256386.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822701|ref|ZP_03263020.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209400693|ref|YP_002269606.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|254792134|ref|YP_003076971.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. TW14359]
 gi|261227438|ref|ZP_05941719.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256139|ref|ZP_05948672.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281935|ref|YP_003498753.1| putative sulfonate ABC transporter permease protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|309787807|ref|ZP_07682417.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 1617]
 gi|81241690|gb|ABB62400.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|187768358|gb|EDU32202.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188014738|gb|EDU52860.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|188998779|gb|EDU67765.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189355924|gb|EDU74343.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|189361139|gb|EDU79558.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372713|gb|EDU91129.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189375323|gb|EDU93739.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC508]
 gi|208728091|gb|EDZ77692.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208731855|gb|EDZ80543.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208738186|gb|EDZ85869.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209162093|gb|ACI39526.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|209774662|gb|ACI85643.1| putative transport system permease protein [Escherichia coli]
 gi|209774666|gb|ACI85645.1| putative transport system permease protein [Escherichia coli]
 gi|254591534|gb|ACT70895.1| alkanesulfonate transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290761808|gb|ADD55769.1| Putative sulfonate ABC transporter, permease protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|308924206|gb|EFP69703.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 1617]
 gi|320192579|gb|EFW67220.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. EC1212]
 gi|320637803|gb|EFX07595.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. G5101]
 gi|320642928|gb|EFX12129.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H- str. 493-89]
 gi|320648385|gb|EFX17040.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H- str. H 2687]
 gi|320653701|gb|EFX21775.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659846|gb|EFX27402.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664315|gb|EFX31466.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326338170|gb|EGD61999.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. 1125]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|167743261|ref|ZP_02416035.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
          Length = 254

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 64  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 123

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 124 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 179 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 232

Query: 565 FVLALN 570
             LAL 
Sbjct: 233 IALALE 238



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 53  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 112

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 113 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 164

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 165 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 201


>gi|167031338|ref|YP_001666569.1| choline ABC transporter permease [Pseudomonas putida GB-1]
 gi|166857826|gb|ABY96233.1| choline ABC transporter, permease protein [Pseudomonas putida GB-1]
          Length = 281

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++  A V+ ++       LAA        + P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  +C++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|254185129|ref|ZP_04891718.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|184215721|gb|EDU12702.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|323185357|gb|EFZ70721.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1357]
          Length = 259

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 97  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 148

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 149 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 202

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 203 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 258


>gi|300824178|ref|ZP_07104297.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|331667316|ref|ZP_08368181.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331676724|ref|ZP_08377420.1| putative transport system permease protein [Escherichia coli H591]
 gi|300523354|gb|EFK44423.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|331065672|gb|EGI37565.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331075413|gb|EGI46711.1| putative transport system permease protein [Escherichia coli H591]
          Length = 278

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277


>gi|238797256|ref|ZP_04640757.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
 gi|238718893|gb|EEQ10708.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
          Length = 255

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ +  A  + +P GI +G  P + + + P  ++    P   + PL+V       
Sbjct: 63  SLGRILIALFAAVALGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIGE 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +    +AG  +        A +   + W+  R+++LP   P 
Sbjct: 123 TS-KILLIYLAIFAP---VTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPE 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 179 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAII 232

Query: 566 VLALN 570
              + 
Sbjct: 233 AFGME 237



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S R+  VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T 
Sbjct: 88  SPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTL 139

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++ +     +R+   S WQ   ++ +P ++P ++  + + +  GW  +VA+E+
Sbjct: 140 AAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAEL 199

Query: 213 I 213
           I
Sbjct: 200 I 200


>gi|237510087|ref|ZP_04522802.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|235002292|gb|EEP51716.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
          Length = 253

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 63  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231

Query: 565 FVLALN 570
             LAL 
Sbjct: 232 IALALE 237



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 52  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200


>gi|254193642|ref|ZP_04900074.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|169650393|gb|EDS83086.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
          Length = 285

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 95  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 210 DILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263

Query: 565 FVLALN 570
             LAL 
Sbjct: 264 IALALE 269



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 84  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  M +++  GW  +VA+E+I
Sbjct: 196 VQLLRHVVLPSALPDILTGMRIALGAGWSTLVAAELI 232


>gi|76817512|ref|YP_335779.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 1710b]
 gi|76581985|gb|ABA51459.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 1710b]
          Length = 253

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 63  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231

Query: 565 FVLALN 570
             LAL 
Sbjct: 232 IALALE 237



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 52  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200


>gi|331646200|ref|ZP_08347303.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli M605]
 gi|330910714|gb|EGH39224.1| alkanesulfonates transport system permease protein [Escherichia
           coli AA86]
 gi|331044952|gb|EGI17079.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli M605]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGMPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|304398693|ref|ZP_07380565.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304353904|gb|EFM18279.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 363

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 23/171 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+A++  +L         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V
Sbjct: 160 VLTALMFCILIGLPLGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNV 216

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
            G  +  IFA+    +  +T      +  +P DL E S SF  S  Q  + + +P +MP 
Sbjct: 217 PGVVVTIIFAL--PPIVRLTI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPT 271

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              G+   +M+++S     VV + MI VG       G+G  +   I   D+
Sbjct: 272 IMAGVNQTLMLALS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 311


>gi|303244148|ref|ZP_07330486.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermococcus okinawensis IH1]
 gi|302485533|gb|EFL48459.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermococcus okinawensis IH1]
          Length = 257

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 9/189 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+   +IA I+ +P+GI +G+   I      F +LL   P   + PL    ++++
Sbjct: 63  ISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRPIPPLAWVPL---ALAWF 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     L ++ I G  + IL N IAG  + P    E   +           +I+P   P
Sbjct: 120 GIGETSMLFIIFI-GAFFPILINTIAGVKSVPKILIESVQTLGAKEKDILLKVIIPASSP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+           GLG  I  +        VV  ++I+  
Sbjct: 179 GILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSRMDIVVASMVIIGI 233

Query: 565 FVLALNRFL 573
             L+L+R L
Sbjct: 234 IGLSLDRGL 242


>gi|255306450|ref|ZP_05350621.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile ATCC 43255]
          Length = 229

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 88/196 (44%), Gaps = 25/196 (12%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++          
Sbjct: 38  RILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 87

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LW  +       ++I  + + I  N + G     N   EV  SF+++  R +  II+P 
Sbjct: 88  -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 146

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ +
Sbjct: 147 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 200

Query: 562 MCCFVLALNRFLWHPL 577
           +  F+  L+ +L+  +
Sbjct: 201 I-GFLGILSDYLFSKI 215


>gi|327253725|gb|EGE65354.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli STEC_7v]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|323159564|gb|EFZ45544.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli E128010]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|300310817|ref|YP_003774909.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300073602|gb|ADJ63001.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 256

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 12/146 (8%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +P+GI++G    +   + P+ +     P   F  L V       L P     + +IF
Sbjct: 80  VIGVPLGIFMGRFETVRQLLDPYIEFFRFIPPIAFVTLAV-----IWLGPGELSKIALIF 134

Query: 459 GTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            T  +I+  N IAG  A        A+S     W+    +ILP   P+ VTGA  A G +
Sbjct: 135 YTTVFIVTLNTIAGVQAVNPLRLRAAASLGAGQWKILSTVILPSTVPFMVTGARIAMGNS 194

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYI 543
           +   + +E+ S         GLGA I
Sbjct: 195 FLTVVSAEIVS------AREGLGALI 214


>gi|89053990|ref|YP_509441.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863539|gb|ABD54416.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 327

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +          A   RL   + P+LD+MQ++P   +L   +V+
Sbjct: 142 EETTESLTLVLSACVVCMGVGVPIGIAVAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVF 201

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A +  +  + +  +T   +  + + P+ L E + +F  +G QK W
Sbjct: 202 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGISSTPQSLLEAADAFGATGSQKLW 252

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 253 KVELPYALPQIMTGLNQTIMLSLS 276


>gi|30249698|ref|NP_841768.1| putative transport system permease [Nitrosomonas europaea ATCC
           19718]
 gi|30180735|emb|CAD85647.1| putative transport system permease [Nitrosomonas europaea ATCC
           19718]
          Length = 278

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           IG + AA+F +F + +  M+ S+  +L  IP +  +++R+   S  + +W++ +P   PG
Sbjct: 146 IGGQ-AAVFIVFMAVLGTMSLSLIAALDGIPAEYLKIARNLGTSRMRMWWHVRLPAITPG 204

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  + MS  G W  V+A EM  +        G+G  I +A +  ++  ++  +L +  +
Sbjct: 205 AMTAIRMSFFGAWMAVLAGEMAGINS------GLGYMIIMAQQMYNMKLVMIGILAIGFI 258

Query: 252 IFLYD 256
            F  D
Sbjct: 259 GFAID 263


>gi|110641130|ref|YP_668860.1| alkanesulfonate transporter permease subunit [Escherichia coli 536]
 gi|191172134|ref|ZP_03033678.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli F11]
 gi|215486059|ref|YP_002328490.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218557839|ref|YP_002390752.1| alkanesulfonate transporter permease subunit [Escherichia coli S88]
 gi|218704364|ref|YP_002411883.1| alkanesulfonate permease [Escherichia coli UMN026]
 gi|293409312|ref|ZP_06652888.1| ssuC [Escherichia coli B354]
 gi|300983007|ref|ZP_07176411.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|301023062|ref|ZP_07186869.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|306812612|ref|ZP_07446805.1| alkanesulfonate transporter permease subunit [Escherichia coli
           NC101]
 gi|312969000|ref|ZP_07783207.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 2362-75]
 gi|331682445|ref|ZP_08383064.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli H299]
 gi|110342722|gb|ABG68959.1| putative aliphatic sulfonates transport permease protein
           [Escherichia coli 536]
 gi|190907661|gb|EDV67256.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli F11]
 gi|215264131|emb|CAS08475.1| alkanesulfonate transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|218364608|emb|CAR02294.2| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218431461|emb|CAR12339.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222032665|emb|CAP75404.1| aliphatic sulfonates transport permease protein ssu [Escherichia
           coli LF82]
 gi|291469780|gb|EFF12264.1| ssuC [Escherichia coli B354]
 gi|300307024|gb|EFJ61544.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300397183|gb|EFJ80721.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|305853375|gb|EFM53814.1| alkanesulfonate transporter permease subunit [Escherichia coli
           NC101]
 gi|307627638|gb|ADN71942.1| alkanesulfonate transporter permease subunit [Escherichia coli
           UM146]
 gi|312286402|gb|EFR14315.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 2362-75]
 gi|312945454|gb|ADR26281.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|320196571|gb|EFW71194.1| Alkanesulfonates transport system permease protein [Escherichia
           coli WV_060327]
 gi|324012923|gb|EGB82142.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|325496872|gb|EGC94731.1| alkanesulfonate transporter permease subunit [Escherichia
           fergusonii ECD227]
 gi|331080076|gb|EGI51255.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli H299]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|26987037|ref|NP_742462.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148545570|ref|YP_001265672.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|24981657|gb|AAN65926.1|AE016220_8 glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148509628|gb|ABQ76488.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313496659|gb|ADR58025.1| Glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida BIRD-1]
          Length = 281

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++  A V+ ++       LAA        + P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  +C++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|167850265|ref|ZP_02475773.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei B7210]
          Length = 252

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 62  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 121

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 122 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 177 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 230

Query: 565 FVLALN 570
             LAL 
Sbjct: 231 IALALE 236



 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 51  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 110

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 111 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 162

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 163 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 199


>gi|134282026|ref|ZP_01768732.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|134246555|gb|EBA46643.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|126442420|ref|YP_001063214.1| taurine ABC transporter permease [Burkholderia pseudomallei 668]
 gi|126221911|gb|ABN85416.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 93  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             LAL 
Sbjct: 262 IALALE 267



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 82  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230


>gi|325288976|ref|YP_004265157.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964377|gb|ADY55156.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           GY+ N  T   +   I    I+ +R+ +  I+A++I IP+GI  G      + IQP ++ 
Sbjct: 53  GYLANVMTTGQIWSDI---GISFYRIFMGFILAAVIGIPLGILAGTFNFAEALIQPVSEF 109

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   F PL++  V    +N +  ++++ + GT + ++  V     A P+D    A 
Sbjct: 110 IRYMPVPAFVPLIMVWVG---INESAKIAVIFL-GTLFQLIPMVADSVRAVPDDLLSAAY 165

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +           +I+P I P  +       G AW   +V+E+ +        +GLG  I 
Sbjct: 166 TLGAKPRTVILKVIIPAIAPRTMDTLRIMMGWAWTYLVVAELVA------ANSGLGYSIL 219

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNR 571
           ++        +  G+LI+    L  +R
Sbjct: 220 KAQRFLKTDAIFGGILIIGFLGLMTDR 246


>gi|324019054|gb|EGB88273.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 278

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277


>gi|300709404|ref|YP_003735218.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
 gi|299123087|gb|ADJ13426.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
          Length = 251

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 15/189 (7%)

Query: 368 VNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  F  QD     WL    +  RV+V  ++A+ + IP+G+ +G     +    P  ++L 
Sbjct: 43  LEEFYRQD----FWLSVARSTVRVLVSFVVAAAVAIPLGLLVGRYTVFADLTFPALEMLR 98

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   + P  +  +    L+    +  +   G  + IL N I GA     +F   A S 
Sbjct: 99  PIPPIAWIPFTILVLPASELS----IMFITFLGAFFPILLNTIQGARGVEVEFSRAAQSL 154

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               ++ +R++I P   P    G I   G AW   I  E+ + G      TGLG     +
Sbjct: 155 GAGSFQTFRHVIYPSALPAIHAGMIVGMGLAWVNLIAGEMVAGG------TGLGFLTWSA 208

Query: 547 TEKGSFPEV 555
              GS+P +
Sbjct: 209 YTSGSYPTI 217


>gi|167724288|ref|ZP_02407524.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei DM98]
          Length = 256

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 66  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 125

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 126 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 181 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 234

Query: 565 FVLALN 570
             LAL 
Sbjct: 235 IALALE 240



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 55  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 114

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 115 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 166

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 167 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 203


>gi|26246962|ref|NP_753002.1| alkanesulfonate transporter permease subunit [Escherichia coli
           CFT073]
 gi|91210036|ref|YP_540022.1| alkanesulfonate transporter permease subunit [Escherichia coli
           UTI89]
 gi|117623152|ref|YP_852065.1| alkanesulfonate transporter permease subunit [Escherichia coli APEC
           O1]
 gi|170683085|ref|YP_001744235.1| alkanesulfonate transporter permease subunit [Escherichia coli
           SMS-3-5]
 gi|227884100|ref|ZP_04001905.1| alkanesulfonate transporter permease subunit [Escherichia coli
           83972]
 gi|237707077|ref|ZP_04537558.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           3_2_53FAA]
 gi|293404239|ref|ZP_06648233.1| aliphatic sulfonates transport system permease [Escherichia coli
           FVEC1412]
 gi|298380023|ref|ZP_06989628.1| sulfonate/nitrate/taurine transport system permease [Escherichia
           coli FVEC1302]
 gi|300896320|ref|ZP_07114863.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300978398|ref|ZP_07174249.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047802|ref|ZP_07194855.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|331657006|ref|ZP_08357968.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA206]
 gi|331662352|ref|ZP_08363275.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA143]
 gi|26107362|gb|AAN79545.1|AE016758_149 Putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli CFT073]
 gi|91071610|gb|ABE06491.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli UTI89]
 gi|115512276|gb|ABJ00351.1| SsuC [Escherichia coli APEC O1]
 gi|170520803|gb|ACB18981.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli SMS-3-5]
 gi|226898287|gb|EEH84546.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           3_2_53FAA]
 gi|227838852|gb|EEJ49318.1| alkanesulfonate transporter permease subunit [Escherichia coli
           83972]
 gi|291428825|gb|EFF01850.1| aliphatic sulfonates transport system permease [Escherichia coli
           FVEC1412]
 gi|294492255|gb|ADE91011.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli IHE3034]
 gi|298279721|gb|EFI21229.1| sulfonate/nitrate/taurine transport system permease [Escherichia
           coli FVEC1302]
 gi|300300334|gb|EFJ56719.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300359785|gb|EFJ75655.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300409686|gb|EFJ93224.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|307552773|gb|ADN45548.1| aliphatic sulfonates transport permease protein with ABC type-1
           transporter domain [Escherichia coli ABU 83972]
 gi|315287579|gb|EFU46985.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315291195|gb|EFU50555.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315296249|gb|EFU55556.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|323953357|gb|EGB49223.1| inner membrane transport system [Escherichia coli H252]
 gi|323958240|gb|EGB53949.1| inner membrane transport system [Escherichia coli H263]
 gi|331055254|gb|EGI27263.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA206]
 gi|331060774|gb|EGI32738.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA143]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|323967181|gb|EGB62605.1| inner membrane transport system [Escherichia coli M863]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|320183835|gb|EFW58668.1| Alkanesulfonates transport system permease protein [Shigella
           flexneri CDC 796-83]
          Length = 161

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +++++P L  +   +++F      K+    L  +F I+         + +  + NI R L
Sbjct: 1   MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDRGL 52

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          GI
Sbjct: 53  VEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------GI 106

Query: 226 GSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           G Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 107 G-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 160


>gi|300718729|ref|YP_003743532.1| taurine ABC transporter permease [Erwinia billingiae Eb661]
 gi|299064565|emb|CAX61685.1| Taurine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 275

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A II +PVGI +G        + P  +L    P   + PL+V     
Sbjct: 81  AASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S     W+   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560
           P  +TG     G  W+  + +E+ +       T GLG ++ +S  +    +VVL    V+
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVI 249

Query: 561 IMCCFVL-----ALNRFL--WHPLY 578
            +  F L     AL R L  WH ++
Sbjct: 250 ALIAFTLELGLRALQRRLTPWHGVH 274



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A+  +++       L   S     +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     ++S   + WQ  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|222055627|ref|YP_002537989.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564916|gb|ACM20888.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 251

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 14/156 (8%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIA 470
            + + + P  + ++  P  +  P  ++ +      P  WLS   ++  G  W IL   I 
Sbjct: 87  RLRTILMPIFRGVSPIPPTMLIPYAIAIL------PTFWLSSAFIIFAGAFWPILMGTIH 140

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G +     + + AS+  + G+R  R +I PG  P   +GA  A   ++    V+E+    
Sbjct: 141 GVTLLEERYLDNASALGLGGFRLMRKVIFPGALPMIFSGAGMALVFSFILLTVAEMFG-- 198

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                  G+G +I    +   +P+V+ G+L M   +
Sbjct: 199 ----AKAGMGHFIQYYADFSDYPKVLAGMLFMSLVI 230


>gi|71905722|ref|YP_283309.1| binding-protein dependent transport system inner membrane protein
           [Dechloromonas aromatica RCB]
 gi|71845343|gb|AAZ44839.1| Binding-protein-dependent transport systems inner membrane
           component [Dechloromonas aromatica RCB]
          Length = 318

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 10/161 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+SI+ +P+GI  G    +    +PF +     PA  F  L V+ +  Y   P + + +
Sbjct: 133 VISSIVGVPLGILAGTYASLGRLSEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 191

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +  F  Q  I+ N      A      E A +    GWR    +++PGI P          
Sbjct: 192 IGTFFQQVLIIANTTRKLEA---TLIEAARTLGSRGWRLIARVVVPGILPNLYQDQRILL 248

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           G AW   IV+E+         ++G+  YI +      F  V
Sbjct: 249 GWAWTYLIVAELIG------TSSGITWYITQQARYQHFDNV 283


>gi|77456591|ref|YP_346096.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380594|gb|ABA72107.1| putative histidine ABC transport system, membrane protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   M+ A VIS+L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMMVATVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|312958480|ref|ZP_07773000.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311287023|gb|EFQ65584.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   M+ A VIS+L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|221635657|ref|YP_002523533.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM
           5159]
 gi|221157705|gb|ACM06823.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM
           5159]
          Length = 271

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV V + +++++ IP+G+ IG  P I+  + P  QL+       + PL +        + 
Sbjct: 69  RVGVGLALSALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPLALLVFGAGSRS- 127

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  L++  T W I+ +   G       +  V  S   + W   R I+ PGI P  + 
Sbjct: 128 ---VVFLIVLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWELLRTIVWPGIRPRVLG 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G AW   + +E+          +GLG  I ++ ++  + E++  +L++    LA
Sbjct: 185 GMRLAVGVAWIVLVPAEMLG------VDSGLGYAILDARDRLDYGELMAVLLVIGMSGLA 238

Query: 569 LN 570
           L+
Sbjct: 239 LD 240


>gi|300819177|ref|ZP_07099378.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300902903|ref|ZP_07120848.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300925385|ref|ZP_07141271.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929633|ref|ZP_07145094.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300949697|ref|ZP_07163678.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300955413|ref|ZP_07167789.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301302450|ref|ZP_07208581.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301326652|ref|ZP_07219982.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301643457|ref|ZP_07243505.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309795077|ref|ZP_07689497.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331641462|ref|ZP_08342597.1| putative transport system permease protein [Escherichia coli H736]
 gi|300317702|gb|EFJ67486.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405045|gb|EFJ88583.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300418514|gb|EFK01825.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300450912|gb|EFK14532.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462410|gb|EFK25903.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300528196|gb|EFK49258.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300842289|gb|EFK70049.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846697|gb|EFK74457.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301078171|gb|EFK92977.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|308121381|gb|EFO58643.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315257980|gb|EFU37948.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|331038260|gb|EGI10480.1| putative transport system permease protein [Escherichia coli H736]
          Length = 278

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277


>gi|333029180|ref|ZP_08457241.1| binding-protein-dependent transport systems inner membrane
           component [Bacteroides coprosuis DSM 18011]
 gi|332739777|gb|EGJ70259.1| binding-protein-dependent transport systems inner membrane
           component [Bacteroides coprosuis DSM 18011]
          Length = 281

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   +LS+  I+LL         A S R   +L P+LD MQ++P   +L   V++F   
Sbjct: 90  ETLALVLSSTFIALLIGVPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYLIPAVLFF--- 146

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V GA    IFA+    V  +T      +  +P+++ E + S   + WQ  + + +P
Sbjct: 147 GLGPVPGAFATVIFAM--PPVVRLT---GLGIRQVPKNIVEATTSLGATRWQLLFKVQLP 201

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            ++P    G+   +MMS+S     VV + MI  G
Sbjct: 202 LALPTILTGVNQTIMMSLS----MVVIAAMIAAG 231



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIW 401
           FW  ++  +AI +AW+  G  V  F+   +L +  +G       T+  V+    IA +I 
Sbjct: 49  FWITIIV-MAI-LAWKKAGKGVALFSVLGLLLIWGMGFWEPTMETLALVLSSTFIALLIG 106

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+W  +       ++P    +   PA V+    +  V ++ L P       +IF   
Sbjct: 107 VPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYL---IPAVLFFGLGPVPGAFATVIFAMP 163

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +    + G    P +  E  +S   T W+    + LP   P  +TG
Sbjct: 164 PVVRLTGL-GIRQVPKNIVEATTSLGATRWQLLFKVQLPLALPTILTG 210


>gi|325289953|ref|YP_004266134.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324965354|gb|ADY56133.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 253

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ FRV++  +++ +I  P+G+ +GF   +   + P   L+   P  VF PL++  +   
Sbjct: 59  VSAFRVILSTVLSLLIGFPLGLIMGFEAKLDKILAPVVYLIYPVPKIVFLPLILFFLGLG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    ++ ++ F     IL          P +  +   S     ++ +R++++P   P
Sbjct: 119 DISKVFLITFIVFF----QILVTTRDAVKKVPFEMIDSLRSLGGNRFQIYRHVLIPASLP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T    + G A      +E  +       + GLG +I ++  + +  E+  G+++M  
Sbjct: 175 DVLTALRVSMGTAIAVLFFAESFA------TSQGLGYFIMDAWSRSAQDEMFAGIIVMGA 228


>gi|241896063|ref|ZP_04783359.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241870711|gb|EER74462.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 576

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 122 AKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMAN 178

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +       +  +P DL E + SF  +G QK + + +P +      G+   +M+++S    
Sbjct: 179 L------GIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLALS---- 228

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+VV  ++I  PG+G  +  A+++ D+
Sbjct: 229 ------MVVVA-SMIGAPGLGRGVLAAVQDADI 254


>gi|194428846|ref|ZP_03061381.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B171]
 gi|194413149|gb|EDX29436.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B171]
          Length = 275

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ +  A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVLALRAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|296111716|ref|YP_003622098.1| betaine ABC transporter permease and substrate binding protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295833248|gb|ADG41129.1| betaine ABC transporter permease and substrate binding protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 568

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A VISL+       L AKS +   ++ PILD MQ++P   +L   V +F + + PG    
Sbjct: 102 ASVISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P  L E + SF  + WQK   L +P +    +
Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPIALVEAADSFGSTTWQKLIKLELPNARNTIL 212

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQRADV 250


>gi|284920785|emb|CBG33848.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Escherichia coli 042]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 RLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|222480558|ref|YP_002566795.1| binding-protein-dependent transport systems inner membrane
           component [Halorubrum lacusprofundi ATCC 49239]
 gi|222453460|gb|ACM57725.1| binding-protein-dependent transport systems inner membrane
           component [Halorubrum lacusprofundi ATCC 49239]
          Length = 267

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  V  P++  ++ +P L  + F + +F   + G        A F I     W   ++ Y
Sbjct: 106 LDDVTAPLVRTLRPVPPLALIGFAIAWFGINHAG--------AAFIIAVGAFWINFYASY 157

Query: 156 QSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            ++  +  DL +V R+  + G       + +P SMPG+   +   +   W  VVASE+  
Sbjct: 158 GAVEGVSEDLLDVGRTLGVRGDLDMVRSIVLPASMPGITTGIRTGLGRCWMLVVASEIFG 217

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           V       PG+G  I L      L+  + A + +L ++FL   + FR
Sbjct: 218 V-------PGVGREI-LRASNNLLVDKVIAYILVLSLMFLLVDVAFR 256


>gi|52142494|ref|YP_084335.1| sulfonate/taurine ABC transporter permease [Bacillus cereus E33L]
 gi|51975963|gb|AAU17513.1| ABC transporter, permease protein; possible sulfonate/taurine
           transporter [Bacillus cereus E33L]
          Length = 274

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 19/156 (12%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I++G ++  RV+   I+ + + IPVG+ IG  P + +   P    +   P   F  L + 
Sbjct: 76  IYIG-VSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFM- 133

Query: 440 CVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                     LW  +       L+ + T + +  N I G  A   D    A S   + W+
Sbjct: 134 ----------LWFGIGEQSKIFLITYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQ 183

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
              ++I+P   PY  TGA  A G ++ A + +E+ +
Sbjct: 184 IMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVA 219



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L F+T  +++F        IG E + IF I  +  + +T +    +  +
Sbjct: 115 PVINFIRFIPPLAFITLFMLWFG-------IG-EQSKIFLITYATFFIVTINTITGVQAV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
             D    +RS   S WQ  +++ +P ++P +     ++M   +  +V +EM+   + +
Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 224


>gi|317049234|ref|YP_004116882.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316950851|gb|ADU70326.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 371

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 186 ARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 240

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E S SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 241 TI---LGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 293

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 294 VVIASMIAVG-------GLGQMVLRGIGRLDM 318


>gi|108805376|ref|YP_645313.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108766619|gb|ABG05501.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 293

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 12/143 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A  T   +++A  ++L+       +AAKSR +  VL P+LD MQ++P   +L   +V 
Sbjct: 94  EDAMLTLALVIAATAVALVVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYLVPAIVL 153

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                    +GA  A +  +  +    +  +M   L  + ++  E + +F  +GWQ    
Sbjct: 154 LG-------LGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRK 205

Query: 183 LGVPFSMP----GLVWNMMMSMS 201
           + +P +MP    G+   +M+S+S
Sbjct: 206 VELPLAMPTIMAGVNQVIMLSLS 228



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  V+    +A ++ IP+GI       + + ++P    +   PA V+    V  +   
Sbjct: 98  LTLALVIAATAVALVVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYL---VPAIVLL 154

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     L  ++IF     +   ++ G      +  E AS+F  TGW+  R + LP   P
Sbjct: 155 GLGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMP 213

Query: 505 YYVTG 509
             + G
Sbjct: 214 TIMAG 218


>gi|221209826|ref|ZP_03582807.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD1]
 gi|221170514|gb|EEE02980.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD1]
          Length = 287

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 14/214 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  +RR     + +    L    + ++  G++   +P ++V       D         +
Sbjct: 21  PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +       K+    L AI A F      +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            + +P ++P LV  +   +S  W F+VA+E+I  
Sbjct: 193 RILLPAALPQLVTGLRTGLSLAWMFMVAAELIAA 226



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 25/178 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     I + + + VG  +G    I + ++P  Q L A P+  + P+++       
Sbjct: 87  SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +   V+AG         E+ + + +     +R I+
Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           LP   P  VTG  T    AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 196 LPAALPQLVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246


>gi|323976679|gb|EGB71767.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|167907187|ref|ZP_02494392.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei NCTC 13177]
          Length = 256

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V       
Sbjct: 66  SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 125

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 126 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 181 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 234

Query: 565 FVLALN 570
             LAL 
Sbjct: 235 IALALE 240



 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L +L
Sbjct: 55  DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 114

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV+F        IG + + I  I+ +    +  +       +       + S   + 
Sbjct: 115 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 166

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Q   ++ +P ++P ++  + +++  GW  +VA+E+I
Sbjct: 167 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 203


>gi|2808669|emb|CAA11380.1| abcB [Paracoccus denitrificans PD1222]
          Length = 267

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           PP +   + P +  +LA +LV  + + L    Q    P ++   +        L   A  
Sbjct: 14  PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 73

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126
           T  R++++  +++           +SR     L P L I+ ++P L  +    ++  +N 
Sbjct: 74  TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 132

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E AAI A+  +++  +T  + +    +  DL++++R+FR+  W +  ++ +P
Sbjct: 133 --------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLP 184

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P +  +    +S  W  V+  E +   +      G+G  I L     D+  +L   L
Sbjct: 185 QLAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWAL 238

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273
             + V+   D +L RP    +N+++ +
Sbjct: 239 AFVAVMLAIDLILLRPWESRANRWKQD 265


>gi|254458247|ref|ZP_05071673.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales
           bacterium GD 1]
 gi|207085083|gb|EDZ62369.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales
           bacterium GD 1]
          Length = 289

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 6/158 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD   + W    ++ RV    ++A ++ +P+G+++G        + PF Q+        +
Sbjct: 85  QDDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAW 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            PL++      ++      ++  IF T  W I+ N   G  +   D+  VA     +   
Sbjct: 145 LPLLLFIFQDINMT-----AISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLE 199

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
               IILP   PY  TG   + G AW   + +E+ + G
Sbjct: 200 KIVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGG 237



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +  V+++L           S+     L P + I + +  L +L   +  F ++    
Sbjct: 100 RVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAWLPLLLFIFQDI---- 155

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                + AI  IF + +W +  +    + ++  D   V++  R S  +K   + +P S+P
Sbjct: 156 ----NMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLEKIVQIILPVSVP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   M +S+   W  +VA+EM+  G
Sbjct: 212 YIFTGMRLSLGIAWLVIVAAEMLTGG 237


>gi|312963731|ref|ZP_07778202.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
 gi|311281766|gb|EFQ60376.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
          Length = 262

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 23/212 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +    I L   F+   L+A   RL   L   + +++++P L  +   +++F   
Sbjct: 66  RAGLGFVIGGSIGLALGFITG-LSAWGERL---LDSSVQMIRNVPHLALIPLVILWFGID 121

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+    L  +F I+         + Y  + N+   L E+SRS+ LSG+  FW + +P
Sbjct: 122 ETAKIFLVALGTLFPIY--------LNTYHGIRNVDPALVEMSRSYGLSGFSLFWQVILP 173

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILY 243
            ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++ +  
Sbjct: 174 GALPSILVGVRFALGFMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVVVLAI 226

Query: 244 AMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274
            M  +LG +  L  + L R  + W   ++L++
Sbjct: 227 VMYAILGKLADLAARGLERVWLRWHPAYQLKK 258


>gi|296535218|ref|ZP_06897433.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296264457|gb|EFH10867.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 244

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++AS+I +P+G+ +G    + +  +PF       PA+ F PL++      
Sbjct: 53  MTVWRVLGGFVLASVIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGVG 112

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + L  +F  Q  I+  VIAGA+    D  E A +         + +I+P   P
Sbjct: 113 EAQKLSVIFLGSVF--QIVIMVAVIAGATRI--DLVEAAYTLGARQGGILKRVIIPAAAP 168

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +       G AW   IV+E+          +G+G  I +S       +++ G++++  
Sbjct: 169 QVMEALRLVLGWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIGL 222

Query: 565 FVL-------ALNR--FLWHPL 577
             L       ALNR  F W  L
Sbjct: 223 IGLVTDFLFKALNRRLFRWASL 244


>gi|70733908|ref|YP_257548.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348207|gb|AAY95813.1| probable permease of ABC transporter PA5095 [Pseudomonas
           fluorescens Pf-5]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +IS+L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|315924093|ref|ZP_07920319.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622495|gb|EFV02450.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 576

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A ++S++       L AK  R  +V+ PILD MQ++P   +L   V +F     G V G 
Sbjct: 104 AALLSVVIGIPLGILMAKKDRAQVVIQPILDFMQTMPAFVYLIPAVAFF---GIGMVPGV 160

Query: 135 ELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
             + IFA+  T +  N+       +  IPR+L E S +F  +  QK + + +P +    M
Sbjct: 161 FASIIFALPPTVRFTNL------GIREIPRELIEASDAFGSTSSQKLFKIELPLARNTIM 214

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            G+   +M+++S           +VV  ++I  PG+G  +  A++ 
Sbjct: 215 AGINQTIMLALS-----------MVVTASMIGAPGLGRGVLSALQR 249


>gi|320177126|gb|EFW52141.1| Alkanesulfonates transport system permease protein [Shigella
           dysenteriae CDC 74-1112]
 gi|332093545|gb|EGI98603.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella boydii 3594-74]
          Length = 183

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 21  IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 72

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 73  GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 126

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 127 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 182


>gi|294085665|ref|YP_003552425.1| nitrate ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665240|gb|ADE40341.1| nitrate ABC transporter, permease protein, putative [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 277

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+   ++A I+ IP G+ +    +      P  ++L   P   + P   + + ++  N 
Sbjct: 84  RVLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVP---ASLIFWPTN- 139

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + ++ +   G  + I+ NV+ GA A    +   A S   + W  +  IILPG  P   T
Sbjct: 140 EMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLPSIFT 199

Query: 509 GAITACGGAWNASIVSEVAS 528
           GA    G  W   + +E+ S
Sbjct: 200 GAAVGMGITWEVVLAAEMIS 219


>gi|218688777|ref|YP_002396989.1| alkanesulfonate transporter permease subunit [Escherichia coli
           ED1a]
 gi|218426341|emb|CAR07166.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|282900985|ref|ZP_06308918.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281194076|gb|EFA69040.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 247

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 13/193 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V ++ A  + +P GI +G   ++        Q +       + P+ V  +    
Sbjct: 59  SLRRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSWMPIAVMVLGIGD 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     +  L+     W ++ N  AG  +    +  ++     T W     +I+P I P+
Sbjct: 119 LP----VYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCATQWEMISQVIIPAIIPH 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI---M 562
            +TG   A G  W   + +E+           GLG YI  + ++ ++ E++  VLI   +
Sbjct: 175 LLTGIRLAIGVIWIVLVPAEMLG------VNEGLGYYILNTRDRLAYSELMAVVLIIGLI 228

Query: 563 CCFVLALNRFLWH 575
            CF+    RF  H
Sbjct: 229 GCFLDITLRFAQH 241


>gi|170733335|ref|YP_001765282.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169816577|gb|ACA91160.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 291

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A++  I +G+ IG    +   + P  ++L   PA  + PL +       
Sbjct: 96  SITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + GA A        A S    G   +  +ILPG  
Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G AW   + +E+ +  +      G+G +  ES    ++P++V+G+ ++
Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+   +   L    LP +   +  R+L+  V + +          + R L   L+P 
Sbjct: 72  APSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPP 131

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +  +       +  
Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            L   +RS    G   +  + +P + P +   + + M   WF +V +EMI 
Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234


>gi|330807064|ref|YP_004351526.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375172|gb|AEA66522.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +IS+L       L+A+S RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  + WQ+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|116671627|ref|YP_832560.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611736|gb|ABK04460.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 257

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+ V +I A +I +  G+ IG    + + ++P  +   A P  V  P+++  +       
Sbjct: 62  RLAVGVIAAIVIGVVGGVLIGSVRWLRALLEPTLEFFRAIPPPVLVPVLMLLMGIT---- 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +    +++I G  W +L N I G  A      + + ++ I GW   RY++LP   P  + 
Sbjct: 118 DSMKVVVIISGCVWPVLLNTIEGVRAVDPVLSDSSHTYGIDGWARVRYLVLPSASPQIMA 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +        ++SE      +   ++GLG  I +     + PE+  G++++    + 
Sbjct: 178 GVRQSMSLGLILMVISE------MFASSSGLGFTIVQFQRSFAIPEMWSGIVVLGLLGVG 231

Query: 569 LN 570
           ++
Sbjct: 232 MS 233


>gi|300362061|ref|ZP_07058238.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus gasseri JV-V03]
 gi|300354680|gb|EFJ70551.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus gasseri JV-V03]
          Length = 515

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L AMVI++   F+        ++     + I  I+Q+IP L  L   + +        +
Sbjct: 31  LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAI 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           I   L AI  IF +         Y  L +IP +LEE + +F L+ W+K   L +P +MP
Sbjct: 87  IALVLYAIMPIFQN--------TYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMP 137


>gi|160898108|ref|YP_001563690.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160363692|gb|ABX35305.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 399

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 28/188 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+++V  ++       L A S R      P+LD MQ+ P   +L   V+ F     G V
Sbjct: 188 VLTSLVFCMVIGLPAGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLF---GIGNV 244

Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G  +  IFA+    ++ N+     +       DL E SR++  S WQ  W + +P +MP
Sbjct: 245 PGVIVTIIFALPPLIRLTNLGIRQVRP------DLIEASRAYGASPWQLLWKVQLPLAMP 298

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
               G+   +M+S+S     VV + MI VG       G+G  +   I   D+     A +
Sbjct: 299 SIMAGVNQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATV 344

Query: 247 TMLGVIFL 254
             LG++ L
Sbjct: 345 GGLGIVLL 352


>gi|238917329|ref|YP_002930846.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
 gi|238872689|gb|ACR72399.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
          Length = 254

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G  +     +E+A  FHI   R  RYII+P + PY ++      G AW A + +E+
Sbjct: 143 NTLTGLRSTDKGIREMADVFHIPWIRRIRYIIMPQLSPYLISAGRVTAGMAWKAGVAAEI 202


>gi|324009885|gb|EGB79104.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 208 GIG-YLAMNAREFLQMDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263


>gi|251789059|ref|YP_003003780.1| nitrate ABC transporter inner membrane subunit [Dickeya zeae
           Ech1591]
 gi|247537680|gb|ACT06301.1| nitrate ABC transporter, inner membrane subunit [Dickeya zeae
           Ech1591]
          Length = 310

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + R +  +  PI+ +++ +  L +L   ++ F          AE A+ + IF   +W
Sbjct: 142 LIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 193

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            M  +  + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +V
Sbjct: 194 PMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIV 253

Query: 209 ASEMIVVG 216
           A+EM+  G
Sbjct: 254 AAEMLTGG 261



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+++ IP G  IG    +++   P   LL       + P  +  + +  
Sbjct: 121 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLP--IGLLLFQR 178

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    S  +   + W ++ N   G    P D+  VA    ++ +   R I+LP + P 
Sbjct: 179 AEPAS--SWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPS 236

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            +TG   + G AW   + +E+ + G       G+G +I       + P +++ +L++
Sbjct: 237 VLTGVRLSIGIAWLVIVAAEMLTGG------IGIGFWIWNEWNNLNVPNIIIAILVI 287


>gi|84686551|ref|ZP_01014444.1| putative permease [Maritimibacter alkaliphilus HTCC2654]
 gi|84665464|gb|EAQ11941.1| putative permease [Rhodobacterales bacterium HTCC2654]
          Length = 296

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 26/197 (13%)

Query: 68  TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +TL ++S A ++ +        L ++S R+  ++ PILD+MQ+IP   +L   V   M L
Sbjct: 102 STLAIISVATILCIAIGIPIGILMSRSDRMQSIITPILDVMQTIPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     I+AI    ++ N+   +  +      D+ E + +F  S  QK + + V
Sbjct: 159 GIGKVPGLIAVCIYAIPPIVRLTNLGIRLVDA------DVMEAADAFGASPRQKLFGVQV 212

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           P ++P    G+   +MM++S          M+V+  ++I + G+G  +  AI  Q L   
Sbjct: 213 PLALPNIFAGVNQTIMMALS----------MVVIA-SMIGVQGLGVPVLRAISNQYLALG 261

Query: 242 LYAMLTMLGVIFLYDQL 258
           L   L ++ +  ++D++
Sbjct: 262 LMNGLAIVALAIIFDRV 278


>gi|296878635|ref|ZP_06902640.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP07]
 gi|296430442|gb|EFH16284.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP07]
          Length = 157

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L   + +LLF      +   S+    VL P++D ++ +PI+ ++  T+V+F    
Sbjct: 25  TLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 81

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +   IF I  S V+ +  +  Q +  I +D    +RS   S    F  + +P 
Sbjct: 82  ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPA 136

Query: 188 SMPGLVWNMMMSMSGGWFFVV 208
           S+P ++    +++S GW  V+
Sbjct: 137 SLPDILTGSRIAISTGWMSVI 157


>gi|254247922|ref|ZP_04941243.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124872698|gb|EAY64414.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 291

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A++  I +G+ IG    +   + P  ++L   PA  + PL +       
Sbjct: 96  SITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + GA A        A S    G   +  +ILPG  
Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G AW   + +E+ +  +      G+G +  ES    ++P++V+G+ ++
Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+   +   L    LP +   +  R+L+  V + +          + R L   L+P 
Sbjct: 72  APADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPP 131

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +  +       +  
Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            L   +RS    G   +  + +P + P +   + + M   WF +V +EMI 
Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234


>gi|317405287|gb|EFV85615.1| nitrate transport system permease [Achromobacter xylosoxidans C54]
          Length = 280

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 12/199 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A+++ IP+G  IG    +     PF Q+L       + PL +  +    
Sbjct: 92  SVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALYTIKDAD 151

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++ +IF  + W +L N   G  A   D+  VA +  ++  R    +ILP   P
Sbjct: 152 TS-----AIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVILPAAAP 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   ++  +L +  
Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSIANIICAILFIGL 260

Query: 565 FVLALNRFLWHPLYLYGTR 583
             + L+  L     L   R
Sbjct: 261 IGMLLDTVLARAARLVSYR 279



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 14/191 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+  +++ L       L   SR +     P + +++ I  L ++   +    +     
Sbjct: 95  RVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALYTIKD----- 149

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A+ +AIF IF   +W M  +    +  + +D   V+R+  +S  +    + +P + P
Sbjct: 150 ---ADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVILPAAAP 206

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M +S+   W  +VA+EM++ G       GIG ++        +  I+ A+L +  
Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICAILFIGL 260

Query: 251 VIFLYDQLLFR 261
           +  L D +L R
Sbjct: 261 IGMLLDTVLAR 271


>gi|291612628|ref|YP_003522785.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
 gi|291582740|gb|ADE10398.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
          Length = 333

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 20/201 (9%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G  +  I Y     TY D ++       +++ V V   + +II +P+GI  G    I + 
Sbjct: 107 GQQFDEIKY-TGQPTYLDQIFT------SLYTVFVGFFLGTIIAVPLGILCGLNKTIQAA 159

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLLM-----IFGTQWYILFNVIA 470
           + P  Q+        + P+V   VS  Y   +P    S L+        + W  L N   
Sbjct: 160 LNPLIQIFRPVSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTAL 219

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G ++   D   V+    ++       I++P       TG   + G AW   I +E+ +  
Sbjct: 220 GVASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA-- 277

Query: 531 HIHLRTTGLGAYIAESTEKGS 551
               +  GLG ++ +  + GS
Sbjct: 278 ----QNPGLGKFVWDEFQNGS 294



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +I +DL  VS+  RLS   K   + +P S+  +   M +S+   W  ++A+EM+    
Sbjct: 221 VASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLAQN- 279

Query: 218 TVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLL 259
                PG+G ++    +    Q L  I+ A+ T+  V FL D+ +
Sbjct: 280 -----PGLGKFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDRTM 319


>gi|254475309|ref|ZP_05088695.1| choline ABC transporter, permease protein [Ruegeria sp. R11]
 gi|214029552|gb|EEB70387.1| choline ABC transporter, permease protein [Ruegeria sp. R11]
          Length = 276

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA ++ +         AA   RL + + P+LD+MQ++P   +L   +V+
Sbjct: 91  EETTESLTLVLSACLVCMAIGVPIGIAAAHRPRLFVAMRPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A +  +  + +  +T   +  + + P+ L E + +F  +  Q  W
Sbjct: 151 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGVSSTPKPLLEAAEAFGATKSQTLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KVELPYALPQIMTGLNQTIMLSLS 225


>gi|158422385|ref|YP_001523677.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329274|dbj|BAF86759.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 284

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 12/179 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+G  IG  P +S  + PF Q+L       + PL +  +    ++     ++ 
Sbjct: 106 LAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSIS-----AVF 160

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +IF  + W +L N   G ++   ++  VA +  +   +    +ILP   P  +TG   + 
Sbjct: 161 VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISI 220

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G AW   + +E+   G      TG+G ++       S   V++ +L++    + L++ L
Sbjct: 221 GIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILVIGVVGMVLDQIL 273



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++A+F IF   VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++
Sbjct: 154 SSISAVFVIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTIL 213

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +S+   W  +VA+EM+V G       GIG ++        +  ++ A+L +  V  
Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILVIGVVGM 267

Query: 254 LYDQLL 259
           + DQ+L
Sbjct: 268 VLDQIL 273


>gi|187779975|ref|ZP_02996448.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC
           15579]
 gi|187773600|gb|EDU37402.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC
           15579]
          Length = 253

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+  I+I+  + I +GI  G    +   ++P    + A P  V   ++++ V +  
Sbjct: 68  SILRVITGILISIALGISLGIIAGINVFMEELLEPLIVTIKATP--VMSIIIIALVWFKS 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   PY
Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLLEMANLYKVKNKYILTNIYLPSTKPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++G +   G  W  S+ SE+ S     +    L A    +TE+
Sbjct: 183 IISGILMCLGIGWKVSVASEILSTPKYSIGLNLLNAKAILATEE 226


>gi|15887513|ref|NP_353194.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15155040|gb|AAK85979.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 257

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++AS+I +PVGI +G    I + ++PF       PA+ F PL++      
Sbjct: 66  MTIWRVVGGFVLASLIAVPVGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G  + I+  V    +    D  E A +         R +++P   
Sbjct: 126 EMQ-----KLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180

Query: 504 PYYVTGAITACGGAWNASIVSEV 526
           P          G AW   IV+E+
Sbjct: 181 PDIAEILRLVLGWAWTYVIVAEL 203


>gi|333008553|gb|EGK28021.1| taurine transport system permease protein tauC [Shigella flexneri
           VA-6]
          Length = 279

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V  ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------VTRGLGFMVQSAGE 235



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 30/153 (19%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A++ +++           S  +  +L P++++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + +  +     ++S   S  Q  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P ++P ++  + + +  GW  +VA+E+I V
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIAV 222


>gi|315083476|gb|EFT55452.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA2]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V S+ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPPG----VRFTEL-GIRGVDTETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|284046292|ref|YP_003396632.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283950513|gb|ADB53257.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 21/204 (10%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L  +  +L+F  V   L A  +   +V+ P ++ ++++P L + +  +++F       
Sbjct: 100 RILRGVGFALVFGVVLGLLLATVKPFRVVVEPYVNFVRALPPLAYFSLLIIWFGI----- 154

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               + + ++ +F +    +  S+   +  I R+  + +R+     WQ   ++ +P  +P
Sbjct: 155 ---EDTSKVWLLFLAAFPPIALSVLSGVQGIRRERIDAARALGAGRWQVVRFVTLPSVLP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTM 248
            L     +++   W  +VA+E      TV  +PGIG  +A A K  +Q  +A+L  +   
Sbjct: 212 ELFTGTRLALGFAWTTIVAAE------TVDGIPGIGG-LAWATKKFQQTDVAVLCIIAIG 264

Query: 249 LGVIFLYDQL---LFRPMIVWSNK 269
           L  I L DQL   L + ++ W  K
Sbjct: 265 LTAIVL-DQLVKQLEKRVVPWRGK 287



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P+   + A P   +F L++        +  +WL  L  F     I  +V++G      
Sbjct: 129 VEPYVNFVRALPPLAYFSLLIIWFGIEDTS-KVWLLFLAAFPP---IALSVLSGVQGIRR 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           +  + A +     W+  R++ LP + P   TG   A G AW   + +E
Sbjct: 185 ERIDAARALGAGRWQVVRFVTLPSVLPELFTGTRLALGFAWTTIVAAE 232


>gi|152985321|ref|YP_001347063.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960479|gb|ABR82504.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 274

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 14/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     I S + + VG W+G      + ++P  Q L A P+  + PL++       
Sbjct: 77  SLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   +L++ G  + +   ++AG       + E+   + ++ +   R I+LP   P 
Sbjct: 137 -TPKI---VLIVLGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +W   + +E+ +       T GLG  +++  E  S P++V+  +++   
Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAT 245

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
           +  L+  L   L     R LR
Sbjct: 246 LGKLSDGLLRSLE---RRALR 263



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 17/206 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   I         T    SRR    L P    +++IP L ++   +++F      K
Sbjct: 80  RVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   L A F ++         ++   +  + R   E+ R +RLS +     + +P ++P
Sbjct: 140 IVLIVLGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   +  ++S  W F+VA+E+I          G+G  ++   +      ++ A+L +  
Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAT 245

Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273
           +  L D LL    R  + W + F  E
Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271


>gi|239815502|ref|YP_002944412.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239802079|gb|ACS19146.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 383

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+++V  ++       L A S R   ++ P+LD MQ+ P   +L   V+ F     G V 
Sbjct: 160 LTSLVFCMIIGLPLGVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLF---GIGNVP 216

Query: 133 GAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           G  +  IFA+    ++ N+       L  +  DL E +R++  S WQ    + +P +MP 
Sbjct: 217 GVIVTIIFALAPLVRLTNL------GLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 270

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 271 IMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 310


>gi|221198985|ref|ZP_03572030.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221205245|ref|ZP_03578261.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221175036|gb|EEE07467.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221181436|gb|EEE13838.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 292

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +LF FV  T AA S R G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYALGVLFAFVL-TSAAVSTRFGRDLLAMLTSMFNPLPSIALLPIALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  +MY     +P  L    R++ L+G ++   + VP ++P
Sbjct: 157 LL-------FVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 SILSGLRVGWAFAWRTLIAAELV 232


>gi|222102563|ref|YP_002539602.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
 gi|221739164|gb|ACM39897.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
          Length = 272

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 6/143 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RVV+   I + + + +G+ +G  P     I+P    LA  P   + PL++  V   
Sbjct: 79  VSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPLLMLLVGIE 138

Query: 445 HLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                  L +++I    +  +  N  +G       ++E+  SF  + W+  R I+LP   
Sbjct: 139 ET-----LKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSPWQQLRLIVLPAAA 193

Query: 504 PYYVTGAITACGGAWNASIVSEV 526
           P   TG       AW + +  E+
Sbjct: 194 PTIFTGIRYGLTNAWTSLVGVEL 216


>gi|322833097|ref|YP_004213124.1| nitrate ABC transporter inner membrane subunit [Rahnella sp. Y9602]
 gi|321168298|gb|ADW73997.1| nitrate ABC transporter, inner membrane subunit [Rahnella sp.
           Y9602]
          Length = 304

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A++I IP G  IG    I+S + P   LL       + P  +  
Sbjct: 110 WNVLASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLRPVSPLAWLP--IGL 167

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +    P    S   IF  + W ++ N   G    P D+  VA    ++ +   R I+ 
Sbjct: 168 LLFQRAEPA---SAWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILF 224

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + PY +TG   + G AW   + +E+ + G       G+G +I       +   +++ +
Sbjct: 225 PAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENIIIAI 278

Query: 560 LIMCCFVLALNRFL 573
           L++    + L + L
Sbjct: 279 LLIGVVGMVLEQGL 292



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +
Sbjct: 146 MLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASAWTIFICSIWPMILNTAEGV 197

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             IP+D   V+R  +LS +     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 198 MRIPQDYLNVARVLKLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG 255


>gi|227503840|ref|ZP_03933889.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium striatum ATCC 6940]
 gi|227199664|gb|EEI79712.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium striatum ATCC 6940]
          Length = 561

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 27/241 (11%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           V  +A  + W  +G +V   +  D+L V      T+   V+  ++A+ + + + +W+   
Sbjct: 29  VVALATRVPWSRLGAVVGQDSTHDLLRV------TLSSAVLATVLATFLGVGLAMWLHGL 82

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG----------TQ 461
            H+   ++    L  A P  V    + + +    L   L  +L + F           T 
Sbjct: 83  KHMGQAVRLLVYLPLAMPPVVGGLALSAALGRRGLLAPLLDALHLKFAFAFAGVVTAHTF 142

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITG---WRWWRYIILPGIFPYYVTGAITACG--- 515
             + F V+A  SA  +  +EV++S    G   W  W+ I LP I P   TGA+ AC    
Sbjct: 143 VALPFVVVAVDSALRHIDQEVSTSARRVGMSRWAVWQKITLPTIAPSIFTGAVLACARSL 202

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAE--STEKG-SFPEVVLGVLIMCCFVLALNRF 572
           G +  +I    ++ G    RT   G Y+    ST+   +   V++G+ ++C  +  L   
Sbjct: 203 GEFGTTITFAGSAPGIT--RTMSSGIYLEREVSTDNAYALSAVLIGLAVLCLALAGLPTL 260

Query: 573 L 573
           L
Sbjct: 261 L 261


>gi|241205709|ref|YP_002976805.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859599|gb|ACS57266.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 280

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   + P L  ++SIP + ++   +++F      KV    +   F ++         
Sbjct: 113 ARRL---IDPSLQALRSIPSIAWVPLFILWFGIFETSKVALIAVGVFFPVY--------L 161

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++ ++ R + EV R FRLSG+     + +P   P  V  +   +  GW FVVA+E 
Sbjct: 162 GISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVTALRSGLGLGWMFVVAAEF 221

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
           +   +      G+G  +    +      I+ A++    V  L D LL     P + W + 
Sbjct: 222 MGASE------GLGYLLVDGQQMGKPDQIMAAIIAFAVVGKLTDSLLLAATTPFLTWQDS 275

Query: 270 FRLE 273
           +R E
Sbjct: 276 YRRE 279


>gi|110678330|ref|YP_681337.1| taurine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109454446|gb|ABG30651.1| taurine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 422

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 231 SLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 290

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     +G S         A S   + W+  RY+I+P   P 
Sbjct: 291 SGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSLPE 346

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++  +   V++G++++   
Sbjct: 347 IFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIGVI 400

Query: 566 VLALNRFL 573
              ++  +
Sbjct: 401 GFGIDMLM 408



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++      GK+I         +F + +W M  +    +  +
Sbjct: 265 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMAIAARSGVSGV 316

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   Y+ VP S+P +     ++M   W  VVA+E++        
Sbjct: 317 KISKVHAAYSLGASKWQIMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEQ---- 372

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269
             G G  I  A K Q+   ++  ++ ++GVI F  D L+    R ++ W  K
Sbjct: 373 --GAGMMIMTASKFQNTDIVIMGII-LIGVIGFGIDMLMRWAERILVPWKGK 421


>gi|308188379|ref|YP_003932510.1| Taurine transport permease protein tauC [Pantoea vagans C9-1]
 gi|308058889|gb|ADO11061.1| Taurine transport permease protein tauC [Pantoea vagans C9-1]
          Length = 275

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 11/165 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI +G  P     + P  ++    P   + PL+V        +  + L  L IF   
Sbjct: 99  IPVGILMGLSPVARGLLDPLIEIYRPIPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 156

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  + +AG           A S     W+  R++ILPG  P  +TG     G  W+  
Sbjct: 157 --VTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWSTL 214

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + +E+ +       T GLG ++ +S  +    +VVL  + +  F+
Sbjct: 215 VAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIAFI 252



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+++I + IP L +L   V++F        IG E + I  I+ +    +T S    +
Sbjct: 114 LLDPLIEIYRPIPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSTLAGV 165

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            N  +     +RS   + WQ   ++ +P ++P ++  + + +  GW  +VA+E+I  
Sbjct: 166 RNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIAA 222


>gi|314981894|gb|EFT25987.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA3]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V S+ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPPG----VRFTEL-GIRGVDTETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|262041819|ref|ZP_06015004.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259040811|gb|EEW41897.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 294

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 139 PLIALLRLVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           YQD    + + W    ++ RV V   +A++  IP+G  IG     +    P   LL    
Sbjct: 89  YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVS 148

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P  +  + +    P    S  +   + W ++ N   G    P D+  VA    ++
Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
            W   R I+ P + P  +TG   + G AW   + +E+ + G
Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245


>gi|295399447|ref|ZP_06809429.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978913|gb|EFG54509.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 279

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++FR V   ++ + I +  GI +GF       + P  Q+L   P     PL +    + 
Sbjct: 83  VSVFRAVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+  G  + +  N   G         +VA   H + W+    +I+P   P
Sbjct: 143 ETSK----VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   + G AW   +V+E+         T G+G  + ++ +  +   V +G+++   
Sbjct: 199 AILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 252



 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 84/183 (45%), Gaps = 19/183 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S +   VL P + ++++IP L      +++F      KV+     A F ++ +       
Sbjct: 109 STKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSKVLLIAKGAFFPVYVNT------ 162

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  +  +   L +V+R    S W+K   L VP ++P ++  + +S+   W  +V +E+
Sbjct: 163 --FIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSGIRLSLGAAWLGLVVAEL 220

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQL---LFRPMIVWSN 268
           +  G T     GIG Y+ +  ++     I++  + +  V+  L D L   L + ++ W +
Sbjct: 221 M--GST----EGIG-YMMMDARQFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRWQD 273

Query: 269 KFR 271
            ++
Sbjct: 274 TYK 276


>gi|254425440|ref|ZP_05039158.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196192929|gb|EDX87893.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 298

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 12/183 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+     A+++ IPVG+ +G    + S +  F +     P   F PL++        + 
Sbjct: 108 RVIAGFTFAALVGIPVGLAMGTFYSMDSLLGGFIRTARYLPIAAFVPLIIIWAGIDEASK 167

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAF-PNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            + + L ++F         +IA A  F PN+   VA +   T W     +ILP   P  +
Sbjct: 168 IIIIFLGIVFYNA-----TMIADAVKFIPNETLNVAYTLGATRWDVVHRVILPATLPSIL 222

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                   GAWN  ++SE+ +         GLG  I  S         +  +LI+C   L
Sbjct: 223 DTLRVNVAGAWNFLVLSELIA------AENGLGFTIVRSQRYLQTDRAMFCILIICLIGL 276

Query: 568 ALN 570
           A +
Sbjct: 277 ATD 279


>gi|50842954|ref|YP_056181.1| glycine betaine transport system permease protein
           [Propionibacterium acnes KPA171202]
 gi|289426537|ref|ZP_06428280.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289428625|ref|ZP_06430308.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|295131025|ref|YP_003581688.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|50840556|gb|AAT83223.1| glycine betaine transport system permease protein
           [Propionibacterium acnes KPA171202]
 gi|289153265|gb|EFD01983.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289158023|gb|EFD06243.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|291376273|gb|ADE00128.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|313773548|gb|EFS39514.1| ABC transporter, permease protein [Propionibacterium acnes
           HL074PA1]
 gi|313794006|gb|EFS42030.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA1]
 gi|313801392|gb|EFS42643.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA2]
 gi|313807928|gb|EFS46409.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA2]
 gi|313811601|gb|EFS49315.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA1]
 gi|313813338|gb|EFS51052.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA1]
 gi|313816791|gb|EFS54505.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA1]
 gi|313819714|gb|EFS57428.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA2]
 gi|313822180|gb|EFS59894.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA1]
 gi|313823586|gb|EFS61300.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA2]
 gi|313825910|gb|EFS63624.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA1]
 gi|313829590|gb|EFS67304.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA2]
 gi|313831343|gb|EFS69057.1| ABC transporter, permease protein [Propionibacterium acnes
           HL007PA1]
 gi|313834953|gb|EFS72667.1| ABC transporter, permease protein [Propionibacterium acnes
           HL056PA1]
 gi|313839886|gb|EFS77600.1| ABC transporter, permease protein [Propionibacterium acnes
           HL086PA1]
 gi|314924669|gb|EFS88500.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA3]
 gi|314962061|gb|EFT06162.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA2]
 gi|314963640|gb|EFT07740.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA1]
 gi|314968528|gb|EFT12626.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA1]
 gi|314974218|gb|EFT18314.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA1]
 gi|314976672|gb|EFT20767.1| ABC transporter, permease protein [Propionibacterium acnes
           HL045PA1]
 gi|314978843|gb|EFT22937.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA2]
 gi|314984311|gb|EFT28403.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA1]
 gi|314986498|gb|EFT30590.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA2]
 gi|314990857|gb|EFT34948.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA3]
 gi|315079494|gb|EFT51487.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA2]
 gi|315081279|gb|EFT53255.1| ABC transporter, permease protein [Propionibacterium acnes
           HL078PA1]
 gi|315087163|gb|EFT59139.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA3]
 gi|315089333|gb|EFT61309.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA1]
 gi|315095357|gb|EFT67333.1| ABC transporter, permease protein [Propionibacterium acnes
           HL038PA1]
 gi|315099239|gb|EFT71215.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA2]
 gi|315106798|gb|EFT78774.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA1]
 gi|315109038|gb|EFT81014.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA2]
 gi|327328380|gb|EGE70142.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL096PA2]
 gi|327329753|gb|EGE71509.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL096PA3]
 gi|327334271|gb|EGE75985.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL097PA1]
 gi|327444165|gb|EGE90819.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA2]
 gi|327444954|gb|EGE91608.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA1]
 gi|327446439|gb|EGE93093.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA2]
 gi|327451973|gb|EGE98627.1| ABC transporter, permease protein [Propionibacterium acnes
           HL092PA1]
 gi|328752194|gb|EGF65810.1| ABC transporter, permease protein [Propionibacterium acnes
           HL020PA1]
 gi|328760038|gb|EGF73618.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL099PA1]
 gi|332675905|gb|AEE72721.1| glycine betaine/L-proline transport system permease protein ProW
           [Propionibacterium acnes 266]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V S+ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|255516844|ref|ZP_05384520.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-97b34]
          Length = 229

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 88/196 (44%), Gaps = 25/196 (12%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++          
Sbjct: 38  RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 87

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LW  +       ++I  + + I  N + G     N   EV  SF+++  R +  II+P 
Sbjct: 88  -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 146

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ +
Sbjct: 147 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 200

Query: 562 MCCFVLALNRFLWHPL 577
           +  F+  L+ +L+  +
Sbjct: 201 I-GFLGILSDYLFSKI 215


>gi|310659580|ref|YP_003937301.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308826358|emb|CBH22396.1| putative ABC transporter, permease protein [Clostridium
           sticklandii]
          Length = 254

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 5/143 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV + +I++ I+ I VGI  G    +   + P    + + P   F  ++++ + +  
Sbjct: 64  SVYRVGLGVILSIILGIAVGIISGMNDLVYEILNPAMVAIKSTPVMSF--IILALIWFSS 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  +++  LM F   W    N +AG         E+A  + ++  +  + I L  + PY
Sbjct: 122 TNSPIFICFLMCFPLVWT---NTVAGIRNVDKKLLEMAHIYDVSKKQIIKKIYLLSLKPY 178

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
           +V+ ++ A G  W  ++ +EV S
Sbjct: 179 FVSSSVQALGLGWKVTVAAEVLS 201


>gi|157145548|ref|YP_001452867.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895]
 gi|157082753|gb|ABV12431.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +L  W     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 190 PQDYLNVARVLQLPEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 18/203 (8%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IP+G  IG     S    P   LL       + P  +  
Sbjct: 99  WNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLP--IGL 156

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +    P    S  +   + W ++ N   G    P D+  VA    +  W   R I+ P
Sbjct: 157 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTVMRRILFP 214

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555
            + P  +TG   + G AW   + +E+ + G       G+G +I       +   +     
Sbjct: 215 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 268

Query: 556 ---VLGVLIMCCFVLALNRFLWH 575
              V+G+L+    +L   RF W 
Sbjct: 269 IIGVVGLLLEQGLMLVARRFSWQ 291


>gi|317970089|ref|ZP_07971479.1| binding-protein-dependent transport systems inner membrane
           component [Synechococcus sp. CB0205]
          Length = 253

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV +   +++ + +P+GI +G  P I   ++P   L+   PA  F PL+   + Y+ L+ 
Sbjct: 67  RVFIGFAMSAGLALPLGILMGTNPVICRLLEPLMGLIRYMPAPAFIPLL---IIYFGLD- 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   LL+  GT ++    ++      P +  E A +           ++ P I P  + 
Sbjct: 123 ELPKVLLIFIGTFFFNTLMIMDSVKFVPRELVETAMTLGGRTMPILTRVVAPFIAPQVLD 182

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                   AWN  IV+E+ +       T GLG  I+ +       E+ +G++++    L 
Sbjct: 183 AYRINMASAWNLVIVAELVA------ATEGLGKRISLAQRFLRTDEIFMGLIVIGLIGLV 236

Query: 569 LN 570
           ++
Sbjct: 237 ID 238


>gi|313763611|gb|EFS34975.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA1]
 gi|314914766|gb|EFS78597.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA4]
 gi|314919272|gb|EFS83103.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA1]
 gi|314920817|gb|EFS84648.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA3]
 gi|314930496|gb|EFS94327.1| ABC transporter, permease protein [Propionibacterium acnes
           HL067PA1]
 gi|314954346|gb|EFS98752.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA1]
 gi|314957469|gb|EFT01572.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA1]
 gi|315100454|gb|EFT72430.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA1]
 gi|327454990|gb|EGF01645.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA3]
 gi|327457721|gb|EGF04376.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA2]
 gi|328755176|gb|EGF68792.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA1]
 gi|328758344|gb|EGF71960.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA2]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V S+ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|307131963|ref|YP_003883979.1| Urea carboxylase-related ABC transporter permease [Dickeya dadantii
           3937]
 gi|306529492|gb|ADM99422.1| Urea carboxylase-related ABC transporter, permease protein [Dickeya
           dadantii 3937]
          Length = 262

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RVV   ++A++I +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 71  MTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG 130

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I+  V     A   D  E A +   +       +++PG  
Sbjct: 131 EMQ-----KILVIFIGSFFQIVLMVAVSVGAARRDLVEAAYTLGCSNRSVVTRVLIPGAA 185

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 186 PDIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDS 222


>gi|296451763|ref|ZP_06893490.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296880165|ref|ZP_06904132.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
 gi|296259397|gb|EFH06265.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296428890|gb|EFH14770.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
          Length = 256

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++          
Sbjct: 65  RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LW  +       ++I  + + I  N + G     N   EV  SF+++  R +  II+P 
Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPN 173

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ +
Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227

Query: 562 M 562
           +
Sbjct: 228 I 228


>gi|254502512|ref|ZP_05114663.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222438583|gb|EEE45262.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 278

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 29/200 (14%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R ++ + +  +   V       L A+S R+  ++ P+LD+MQ++P   +L   V+ 
Sbjct: 81  EDTMRTIAMVTVCTMMAIVLGIPLGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMI 140

Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F     GKV G     I+AI    ++ N+   +  +      D+ E + +F  S WQK  
Sbjct: 141 F---GLGKVPGMIAVVIYAIPPMIRLTNLGIRLVDT------DVLEAADAFGSSSWQKLT 191

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+   +MM+++          M+VV   +I + G+G  +  AI  Q 
Sbjct: 192 NVQLPLALPTIMAGVNQTIMMALA----------MVVVA-ALIGVKGLGQPVLNAIANQY 240

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
           L   +   L ++ +  ++D+
Sbjct: 241 LTMGVMNGLAIVAIAIIFDR 260


>gi|163732636|ref|ZP_02140081.1| taurine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
 gi|161393996|gb|EDQ18320.1| taurine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
          Length = 422

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 231 SLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 290

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     +G S         A S   + W+  RY+I+P   P 
Sbjct: 291 SGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSLPE 346

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++  +   V++G++++   
Sbjct: 347 IFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIGVI 400

Query: 566 VLALNRFL 573
              ++  +
Sbjct: 401 GFGIDMLM 408



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++      GK+I         +F + +W M  +    +  +
Sbjct: 265 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMAIAARSGVSGV 316

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   Y+ VP S+P +     ++M   W  VVA+E++        
Sbjct: 317 KISKVHAAYSLGASKWQIMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEQ---- 372

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269
             G G  I  A K Q+   ++  ++ ++GVI F  D L+    R ++ W  K
Sbjct: 373 --GAGMMIMTASKFQNTDIVIMGII-LIGVIGFGIDMLMRWAERILVPWKGK 421


>gi|282854622|ref|ZP_06263957.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|282582204|gb|EFB87586.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|314923882|gb|EFS87713.1| ABC transporter, permease protein [Propionibacterium acnes
           HL001PA1]
 gi|314966061|gb|EFT10160.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA2]
 gi|315090758|gb|EFT62734.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA4]
 gi|315095007|gb|EFT66983.1| ABC transporter, permease protein [Propionibacterium acnes
           HL060PA1]
 gi|315104232|gb|EFT76208.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA2]
 gi|327328060|gb|EGE69829.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL103PA1]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V S+ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|159044213|ref|YP_001533007.1| putative ABC transporter permease [Dinoroseobacter shibae DFL 12]
 gi|157911973|gb|ABV93406.1| putative ABC transporter permease protein [Dinoroseobacter shibae
           DFL 12]
          Length = 360

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  VS+  +++ + K   L +P ++P +   + +S+  GW  
Sbjct: 238 LWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMV 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++         D LA I+ A+LT+  + FL D+L+F
Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFLLDRLMF 348



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/189 (20%), Positives = 77/189 (40%), Gaps = 16/189 (8%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453
           ++A+++ +P+GI  G     ++ + P  Q+        + P+V   VS  Y  N  L+  
Sbjct: 165 LVATVVAVPLGISAGLSVTANAALNPIIQIFKPVSPLAWLPIVTMVVSAVYTTNDGLFEK 224

Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             ++        + W  L N   G S+   D   V+    +  +     ++LP   P   
Sbjct: 225 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLVLPSALPLIF 284

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564
           TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +++ VL +  
Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGI 338

Query: 565 FVLALNRFL 573
               L+R +
Sbjct: 339 IGFLLDRLM 347


>gi|148545502|ref|YP_001265604.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148509560|gb|ABQ76420.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 279

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V       
Sbjct: 87  SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  + L  L IF     I      G           A S   +  +  R++ILP   P 
Sbjct: 147 LS-KVLLIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256

Query: 566 VLALNRFL 573
             AL   L
Sbjct: 257 AFALEMSL 264


>gi|297171487|gb|ADI22487.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF0500_07A21]
          Length = 709

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 12/125 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LAA +R +  +L P+LD MQ++P+  +L    V  + L+ G  I A +A +       V 
Sbjct: 540 LAAYNRTVDALLKPVLDTMQTMPVFVYL----VPVIMLFGGGQIPAVIATVIYALPPLVR 595

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
             T  + +    +P ++ EVS SF  S  Q    + +P ++P +    M+ ++ G    +
Sbjct: 596 CTTLGIRE----LPEEINEVSSSFGASTTQTLIKIKIPMAIPAI----MVGINQGIMMAL 647

Query: 209 ASEMI 213
           A E+I
Sbjct: 648 AMEVI 652



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 99/217 (45%), Gaps = 30/217 (13%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   M  ++ IS++   ++  +A++S R   ++ PILD MQ++P   +L      F 
Sbjct: 137 AMETLSLMCISIAISVMIGVLFGIVASQSDRFETIIKPILDTMQTLPAFIYLIPAFYLFG 196

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PG ++   + A+  +   ++ N+       +  +P  ++E + SF  +  Q    + 
Sbjct: 197 LGAPGALLATVIYALPPVV--RLTNL------GIRQVPAGIDEAATSFGATKIQSLVKVK 248

Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +P +MP    G+   +MM+++           +VV  T I  PG+G  +   ++  ++  
Sbjct: 249 IPMAMPAIKLGINQTVMMALA-----------LVVLATFIAAPGLGDIVFRGMQRLNVGK 297

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
            L   + ++ +  + D++ +          ++ERT+G
Sbjct: 298 ALEGGVAIVLMAIVLDRVTY-------AMGQVERTSG 327


>gi|168179101|ref|ZP_02613765.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|187776832|ref|ZP_02993305.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC
           15579]
 gi|226950677|ref|YP_002805768.1| ABC transporter permease [Clostridium botulinum A2 str. Kyoto]
 gi|182670213|gb|EDT82189.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|187775491|gb|EDU39293.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC
           15579]
 gi|226842851|gb|ACO85517.1| ABC transporter, permease protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 213

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL +      
Sbjct: 80  ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P ++L   + F   + ++ N IAG      D+   A S     W  +  IILP   P
Sbjct: 140 D-GPTIFL---ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 195

Query: 505 YYVTGAITACGGAW 518
             +TGA  A  G W
Sbjct: 196 DILTGARIAISGGW 209



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +D ++ +PI+ ++  T+V+F        IG +   IF I  S ++ +  +    + NI +
Sbjct: 117 IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLITFSGIFPVILNTIAGVKNISK 168

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           D    +RS     W  F  + +P S+P ++    +++SGGW  V+
Sbjct: 169 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 213


>gi|251795830|ref|YP_003010561.1| phosphate ABC transporter inner membrane protein PstC
           [Paenibacillus sp. JDR-2]
 gi|247543456|gb|ACT00475.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus sp. JDR-2]
          Length = 300

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 70/134 (52%), Gaps = 6/134 (4%)

Query: 93  SRRLGMVLV-PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147
           S +LG   + P+++++  IP  + GF+  +V+   F NL+PG+ +G    AI   F   +
Sbjct: 110 SPKLGRTFMQPVIELLAGIPSVVYGFVGLSVIVPLFRNLFPGQGVGIAAGAIVLAFM-IL 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +T     +L ++P  L+E S +   + WQ  + + +P ++P  +  +++ ++  +   
Sbjct: 169 PTITTIATDALASLPAGLKEGSYALGATRWQTIYRIVLPTTLPAQMTGIVLGIARAFGEA 228

Query: 208 VASEMIVVGDTVIP 221
           +A +M++     IP
Sbjct: 229 LAVQMVIGNAPHIP 242


>gi|221215496|ref|ZP_03588460.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221164680|gb|EED97162.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 291

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 14/179 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+     A++  + +G+ IG    +   + P  ++L   PA  + PL +       
Sbjct: 96  SVTRVLAGFAAAAVTGVGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAI------L 149

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + P+  LS++ I   G  + IL N + GA A        A S    G+  +  +ILPG  
Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   TG     G AW   + +E+ +  +      G+G +   S    ++P++V+G+ ++
Sbjct: 210 PAIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/171 (18%), Positives = 71/171 (41%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+   +   L    LP +   +  R+L+    + +          + R L   L+P 
Sbjct: 72  APADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTGVGLGLAIGRYRALEDALLPP 131

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +  +       +  
Sbjct: 132 LEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            L   +RS    G+  +  + +P + P +   + + M   WF +V +EMI 
Sbjct: 184 RLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMIA 234


>gi|163760699|ref|ZP_02167779.1| putative permease protein [Hoeflea phototrophica DFL-43]
 gi|162282021|gb|EDQ32312.1| putative permease protein [Hoeflea phototrophica DFL-43]
          Length = 281

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           ++S R+  +  PILDIMQ++P   +L   ++ F     GKV G     I+AI    ++ N
Sbjct: 112 SRSNRVQSIFNPILDIMQTMPSFVYLIPVIMLF---GIGKVPGLIAVIIYAIPPIIRLTN 168

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +D+ E + +F  S WQ+   + +P ++P    G+   +MM+++    
Sbjct: 169 LGIRL------VDKDVLEAADAFGSSNWQRLKNVQMPLALPTIMAGINQTIMMALA---- 218

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+VV  +++ + G+G  +  AI  Q     +   L ++GV  ++D+
Sbjct: 219 ------MVVVA-SMVGVQGLGQQVLRAINNQYFTLGVLNGLAIVGVAIIFDR 263


>gi|87121997|ref|ZP_01077882.1| glycine betaine/L-proline ABC transporter, permease protein
           [Marinomonas sp. MED121]
 gi|86162795|gb|EAQ64075.1| glycine betaine/L-proline ABC transporter, permease protein
           [Marinomonas sp. MED121]
          Length = 311

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 24/178 (13%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S TTL + L+A+   ++       L+A+S R+  ++ P+LD MQ++P   +L   V+ F 
Sbjct: 98  SMTTLSLVLTALFFCVVIGVPLGILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLF- 156

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA+    V      + Q    +P D  E +R+F  +  Q    + 
Sbjct: 157 --GIGNVPGVLVTIIFAL-PPLVRLTNLGIRQ----VPEDKIEAARAFGCTPKQMLLKIQ 209

Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +P + P    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 210 LPLATPTIMAGINQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 256


>gi|271501225|ref|YP_003334250.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii
           Ech586]
 gi|270344780|gb|ACZ77545.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii
           Ech586]
          Length = 309

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + R +  +  PI+ +++ +  L +L   ++ F          AE A+ + IF   +W
Sbjct: 141 LIGRFRFIAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 192

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            M  +  + +  IP+D   V+R  +LS +     + +P  +P ++  + +S+   W  +V
Sbjct: 193 PMILNTAEGVRQIPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIV 252

Query: 209 ASEMIVVG 216
           A+EM+  G
Sbjct: 253 AAEMLTGG 260



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 20/210 (9%)

Query: 361 WQSIGYIVNHFTYQDVLYVI--------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
           WQ+  ++     + D  YV         W    ++ RV +   +A+++ IP G  IG   
Sbjct: 89  WQT--WLAAQSIFADPFYVAGPNDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFR 146

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            I++   P   LL       + P  +  + +    P    S  +   + W ++ N   G 
Sbjct: 147 FIAAMFNPIISLLRPVSPLAWLP--IGLLLFQRAEPAS--SWTIFICSIWPMILNTAEGV 202

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G  
Sbjct: 203 RQIPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG-- 260

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                G+G +I       + P ++  +L++
Sbjct: 261 ----IGIGFWIWNEWNNLNVPNIITAILVI 286


>gi|311895396|dbj|BAJ27804.1| putative aliphatic sulfonate ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 301

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 11/189 (5%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I  P+G+ +     + + + P    L + P+  + P  +  +       N  +  +++ 
Sbjct: 114 LIGTPIGLVVAQLKPVRAALGPVLSGLQSLPSVAWVPAAIIWLGIT----NSAMYAVILL 169

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           G    I   +I+G    P  +     +   TG R  R+I+LP   P Y++G       +W
Sbjct: 170 GAVPSIANGLISGIDQVPPIYLRAGQTLGATGLRGARHILLPAALPGYLSGLKQGWAFSW 229

Query: 519 NASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            + + +E +AS   + L   GLG ++    E  +   V LG+L++    +A++   + PL
Sbjct: 230 RSLMAAELIASSPDLGL---GLGRFLENQREFSNMSGVFLGILLILIVGVAIDLLFFSPL 286

Query: 578 YLYGTRCLR 586
                R LR
Sbjct: 287 E---RRVLR 292


>gi|323466568|gb|ADX70255.1| Glycine betaine/choline ABC transporter permease component
           [Lactobacillus helveticus H10]
          Length = 226

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 15/184 (8%)

Query: 394 IIIASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNP 448
           ++IA+II  P+G ++G +   I++  + FAQ+L   P+     +  P + + V+     P
Sbjct: 43  LLIAAIIAFPLG-YLGSKNKVIAAFCESFAQILRIIPSLALLFILIPFIGTGVA-----P 96

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +++       ++ N + G +  P D +EV  S  +T     + I LP   PY + 
Sbjct: 97  ALIALVVLALPP---LVVNTVLGFNEVPKDLEEVGLSLGMTNMDLLKQISLPLALPYILN 153

Query: 509 GAITACGGA-WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           G   A      +AS+ + + + G   L  TGLG Y  +    G     +L +L M  F L
Sbjct: 154 GIKLALVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVVIGGVSVALLSLLAMIIFDL 213

Query: 568 ALNR 571
            + +
Sbjct: 214 IIGK 217


>gi|295397940|ref|ZP_06807997.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Aerococcus viridans ATCC
           11563]
 gi|294973825|gb|EFG49595.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Aerococcus viridans ATCC
           11563]
          Length = 285

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 33/215 (15%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
            T   +L + VIS++        +AKS+ +  +L PILD MQ++P   +L   V +F + 
Sbjct: 99  NTVTLVLVSSVISIIIGVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFGIG 158

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG       A++       V      + Q    I  +L E + +F  +G QK + + +
Sbjct: 159 IVPG-----TFASVIFALPPTVRFTELGIKQ----ISTELVEAADAFGSTGKQKLFKVEL 209

Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           P +    M G+   +M+++S           +VV  ++I  PG+G  +  A++   + + 
Sbjct: 210 PLAKSTIMAGVNQTVMLALS-----------MVVTASMIGAPGLGRQVLTALQRASVGSG 258

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
             + L ++ +  L D+L        +N+F  ++ +
Sbjct: 259 FVSGLAIVILAILIDRL--------TNRFTADKNS 285


>gi|242240062|ref|YP_002988243.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242132119|gb|ACS86421.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 282

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 22/210 (10%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFT--------YQDVLYVIWLGCITMFRVVVLIIIA 397
           + +F +  GV +G  W  + ++ + FT        + D  +   +G +T+ RVV   ++A
Sbjct: 46  VLFFGIWGGVTLG-GWVPVTFLADPFTMLREGVLLFTDYDFTQDIG-MTVMRVVAGFLLA 103

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           ++I +P+GI +G    + +  +PF       PA+ F PL++       +       +L+I
Sbjct: 104 ALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIGEMQ-----KVLVI 158

Query: 458 F-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           F G+ + I+  V         D  E A +   +       +++PG  P          G 
Sbjct: 159 FIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVLRVLIPGSAPDIAELLRLVLGW 218

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           AW   IV+E+         ++G+G  I +S
Sbjct: 219 AWTYVIVAELIG------ASSGIGHMIVDS 242


>gi|313199894|ref|YP_004038552.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|312439210|gb|ADQ83316.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 264

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L+ + I   F  V     A SR +   + P+  I++ +P++G +    ++  N     
Sbjct: 73  RALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLGN----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               + A +F +  S  + +  + Y+SL  +     EV    +LS  Q+F ++ +P ++P
Sbjct: 128 ---GDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAALP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   +  +++  W   + SE++
Sbjct: 185 NIFTGVSFALAMAWLSTIGSEIL 207


>gi|302522994|ref|ZP_07275336.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302431889|gb|EFL03705.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 247

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL +  +    
Sbjct: 56  SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             P +++  L  F      L  V+A   G +A      + A          +  +++P  
Sbjct: 116 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 168

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ + GA    G +W   + +E+ +         GLG  +  +      P + +G+L +
Sbjct: 169 TPFLLVGARIGLGSSWATLVAAELIA------ADKGLGYEMTHAQTYYDLPTIFVGLLTI 222

Query: 563 CCFVLALNRFL 573
               L ++R L
Sbjct: 223 GVVGLVMDRLL 233


>gi|282900728|ref|ZP_06308670.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
 gi|281194528|gb|EFA69483.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
          Length = 263

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 20/182 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A++I IP+G+ +G  P + + ++P   +    PA  F P++   + Y+ 
Sbjct: 73  SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLEPAISIFRYMPAPAFIPML---ILYFG 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE-VASSFHITGWRWWRYIILPGIFP 504
           L     + LL+  GT   + FN +    A     +E + +S+ + G      I+L  I P
Sbjct: 130 LGETPKI-LLIFIGT---VFFNTLMIMDAVKFVSRELIETSYTLGGQN--HQILLQVILP 183

Query: 505 YYVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           + V   I AC      +WN  IV+E+ +       T G+G  I+ +       E+  G++
Sbjct: 184 FIVPNIIDACRVNMAASWNLVIVAELVA------ATEGIGRRISVAQRFLKTDEIFAGLI 237

Query: 561 IM 562
           ++
Sbjct: 238 VI 239



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 17/205 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+L   +++ + +     L      +  +L P + I + +P   F+   ++YF    
Sbjct: 73  SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLEPAISIFRYMPAPAFIPMLILYFGL-- 130

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   I  IF   V+  T  +  ++  + R+L E S +      Q    + +PF
Sbjct: 131 ------GETPKILLIFIGTVFFNTLMIMDAVKFVSRELIETSYTLGGQNHQILLQVILPF 184

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYA 244
            +P ++    ++M+  W  V+ +E++   +      GIG  I++A   +K  ++ A L  
Sbjct: 185 IVPNIIDACRVNMAASWNLVIVAELVAATE------GIGRRISVAQRFLKTDEIFAGLIV 238

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +  VI +   +L R +  W++ 
Sbjct: 239 IGLIGVVIDILLVMLHRMVCKWAHN 263


>gi|253576983|ref|ZP_04854306.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843593|gb|EES71618.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 281

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 25/169 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           ++++ +IS+LF       +A S+ +  V+ P+LD MQ++P   +L   V +F + + PG 
Sbjct: 97  VITSGLISILFGIPIGIWSAYSKMVHRVISPLLDFMQTMPAFVYLLPAVTFFSLGVVPGV 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +     + IFAI       +T   Y  +  +  +L E + +F  + WQK + + +P +MP
Sbjct: 157 IA----SVIFAI--PPTIRLT---YLGIKQVNGELTEAANAFGSTVWQKLFKVELPLAMP 207

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               G+   +M+S+S          M+V+  ++I   GIG+ +  A+ +
Sbjct: 208 TLMAGVNQTIMLSLS----------MVVIA-SMIGAQGIGATVYRAVTQ 245


>gi|326329657|ref|ZP_08195979.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Nocardioidaceae bacterium Broad-1]
 gi|325952653|gb|EGD44671.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Nocardioidaceae bacterium Broad-1]
          Length = 293

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           I   +QP+  +  A P    +P++V           L + LL +  +   ++ N + G  
Sbjct: 132 IRQALQPYLNVFYAIPTFALYPVLVVMFG----TGALPIILLAVAFSVVVVISNSLVGFD 187

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P   ++++ S  +   R +R I+LP   P  + G     G A  A + SE        
Sbjct: 188 TVPAIVRKLSRSLDLNPLRHFRLILLPSALPDILAGLKLGLGYAIIAVLASE------FI 241

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLWH 575
           L T GLG  +A++    + P++  GV+ +  F L        AL RF W 
Sbjct: 242 LATKGLGNTVADAYASFNTPDMYAGVIFIAMFALGSNMLLGAALARFDWR 291


>gi|15597523|ref|NP_251017.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107101772|ref|ZP_01365690.1| hypothetical protein PaerPA_01002817 [Pseudomonas aeruginosa PACS2]
 gi|218891698|ref|YP_002440565.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254235335|ref|ZP_04928658.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719]
 gi|9948362|gb|AAG05715.1|AE004659_1 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126167266|gb|EAZ52777.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719]
 gi|218771924|emb|CAW27703.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   W IL N  AG       + +++ S   T W   R +ILPGI  + +TG   A 
Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           G  W   +  E+         + GLG YI ++ ++ ++ E++
Sbjct: 189 GILWIVLVPCEMLG------VSAGLGYYILDTRDRLAYSELM 224


>gi|255656336|ref|ZP_05401745.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
 gi|296450220|ref|ZP_06891981.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
 gi|296260983|gb|EFH07817.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
          Length = 209

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L   + +LLF      +   S+    VL P++D ++ +PI+ ++  T+V+F    
Sbjct: 77  TLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 133

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +   IF I  S V+ +  +  Q +  I +D    +RS   S    F  + +P 
Sbjct: 134 ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPA 188

Query: 188 SMPGLVWNMMMSMSGGWFFVV 208
           S+P ++    +++S GW  V+
Sbjct: 189 SLPDILTGSRIAISTGWMSVI 209


>gi|152981719|ref|YP_001355226.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281796|gb|ABR90206.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 255

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 13/189 (6%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  LF   +   AA  R   ++   ++ I++ IP L ++ F + +F   + G        
Sbjct: 76  LGTLFGIAFGLAAATIRPFELLQAYLIRILRPIPPLAWVVFAIAWFKVSHAG-------- 127

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF-RLSGWQKFWYLGVPFSMPGLVWNM 196
           A F I     W   ++   ++ NI     E++RSF + S W++   + +P   PG +  +
Sbjct: 128 AAFVISIGVFWINYYATASAVRNIDPRFYELARSFGQGSYWRRAVSITLPAIAPGTLAGI 187

Query: 197 MMSMSGGWFFVVASEMIVV---GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
              +   W  ++A+E++ V   G  +    G+G+Y A+ I     ++++YA+  ++ V+ 
Sbjct: 188 RTGIGQAWMTLIAAELLGVPGMGQEMNAAAGVGAYEAVVIYMLA-ISLVYAISDLIYVLI 246

Query: 254 LYDQLLFRP 262
               L +RP
Sbjct: 247 EKRVLSWRP 255


>gi|126668758|ref|ZP_01739707.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Marinobacter sp. ELB17]
 gi|126626795|gb|EAZ97443.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Marinobacter sp. ELB17]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 31/172 (18%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +++ IP L ++ F +++F  + P        AA F I     W   F+ Y ++ +I    
Sbjct: 103 LLRPIPPLAWIPFAIIWF-GINPS-------AAAFIISIGVFWINYFASYSAVHSIDPSF 154

Query: 166 EEVSRSFRLSGWQKFW----YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +EV+++F   G ++F      + +P + PG++  +   +  GW  VVA+E+  +      
Sbjct: 155 DEVAQAF---GQRRFLSRLTKVNLPAAAPGILGGLRAGLGQGWMTVVAAELFGI------ 205

Query: 222 LPGIGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            PGIG  +   ++   LLA   ++  MLT+ G+  L+D    L+ R ++ W 
Sbjct: 206 -PGIGQRM---MEASSLLATDIVVVYMLTIAGLYALFDFLFMLIQRRLLRWQ 253


>gi|294085008|ref|YP_003551768.1| putative taurine uptake ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664583|gb|ADE39684.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 642

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 24/183 (13%)

Query: 372 TYQDVLYVI-----WLGCITM---------FRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            Y+D L  +     +LG I M         FRV+V + +  ++ +P+GI++G      S 
Sbjct: 423 NYKDKLLAVAQGDVYLGSIPMLDGHIWDSLFRVIVALTLGILLGVPLGIYMGVSRFFKSF 482

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             P  +L    P   + PL+++       +  ++L  ++ F     ++ +   GAS    
Sbjct: 483 FDPLIELYRPVPPLAWAPLILTIFGIQD-DGKIFLLFMVAFA---IMVISARTGASGTQL 538

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                + S   T  +  R++ILP   P  +TG   A G  W   + +E+ +       TT
Sbjct: 539 SKIRASHSLGATNQQIMRHVILPNAMPEILTGIRIAVGVCWGTLVAAEMLA------GTT 592

Query: 538 GLG 540
           GLG
Sbjct: 593 GLG 595


>gi|302387734|ref|YP_003823556.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302198362|gb|ADL05933.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 260

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P     ++P   L+ + P   F  L +  V   +L+  ++++ L++F     I  N +AG
Sbjct: 86  PLFKDFLEPLMSLIKSVPVASFVILALIWVGSGNLS--VFIAFLVVFPI---IYINTMAG 140

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            ++      E+A +FH+ G +   YI  P + PY ++G   A G  W + + +EV
Sbjct: 141 FTSTDPKLLEMARTFHMQGGKKLFYIYRPALMPYLISGCRVALGMGWKSGVAAEV 195



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P++ +++S+P+  F+   +++         +G+   ++F  F      +  +      
Sbjct: 92  LEPLMSLIKSVPVASFVILALIW---------VGSGNLSVFIAFLVVFPIIYINTMAGFT 142

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +    L E++R+F + G +K +Y+  P  MP L+    +++  GW   VA+E+I V +  
Sbjct: 143 STDPKLLEMARTFHMQGGKKLFYIYRPALMPYLISGCRVALGMGWKSGVAAEVIGVPNHS 202

Query: 220 I 220
           I
Sbjct: 203 I 203


>gi|253997820|ref|YP_003049883.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|253984499|gb|ACT49356.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
          Length = 264

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L+ + I   F  V     A SR +   + P+  I++ +P++G +    ++  N     
Sbjct: 73  RALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLGN----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               + A +F +  S  + +  + Y+SL  +     EV    +LS  Q+F ++ +P ++P
Sbjct: 128 ---GDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAALP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   +  +++  W   + SE++
Sbjct: 185 NIFTGVSFALAMAWLSTIGSEIL 207


>gi|83950025|ref|ZP_00958758.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
 gi|83837924|gb|EAP77220.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
          Length = 424

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  +I +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 233 SLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 292

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     +G S         A S   + W+  RY+I+P   P 
Sbjct: 293 AGK----IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQIMRYVIIPNSLPE 348

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 349 IFTGARVAMGVCWGTVVAAELVA 371



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK+I         +F + +W M  +    +  +
Sbjct: 267 PIVEFMRPVPPLALIPLVIIWFGIGEAGKII--------LLFLAALWIMAIAARSGVSGV 318

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                  + S   S WQ   Y+ +P S+P +     ++M   W  VVA+E++  
Sbjct: 319 AISKVHAAYSLGASKWQIMRYVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAA 372


>gi|319947269|ref|ZP_08021502.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus australis ATCC 700641]
 gi|319746511|gb|EFV98771.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus australis ATCC 700641]
          Length = 303

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA+V +         +   S +   +L P ++++  IP 
Sbjct: 69  PSGKEFGALPMILGSFIVTLLSALVATPFAIGAAVFMTEVSPKGARLLQPAIELLVGIPS 128

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   VV  +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E 
Sbjct: 129 VVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRAVPRHYREA 187

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V    V+P
Sbjct: 188 SMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVP 240


>gi|254486656|ref|ZP_05099861.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101]
 gi|214043525|gb|EEB84163.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101]
          Length = 277

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +         AA   RL   + P+LD+MQ++P   +L   +V+
Sbjct: 91  EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRLYRYMAPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +          I  +Q+          + + P+ L E +++F     Q  W
Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKSLLEAAQAFGAKPSQTLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KIELPYALPQIMAGLNQTIMLSLS 225


>gi|83950286|ref|ZP_00959019.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius nubinhibens ISM]
 gi|83838185|gb|EAP77481.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius nubinhibens ISM]
          Length = 513

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 28/196 (14%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q A  T   +++A +I ++F        +KSRR   ++ PILD+MQ+IP   +L   + +
Sbjct: 325 QTAMDTMSLVVAASIICVVFGLPLGIWVSKSRRGKAIITPILDVMQTIPSFVYLLPAIAF 384

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     GK  G     IFA+       M       +  +P + +E + +F  +  Q    
Sbjct: 385 F---SIGKPPGILATVIFAMPP-----MVRLTALGILQVPENTKEAALAFGANPRQLLTK 436

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD- 237
           + +P +MP    G+   +MMS+S     VV + +I  G       G+G  +  A++  + 
Sbjct: 437 VELPLAMPSIMTGINQVVMMSLS----MVVVAALIGAG-------GMGYIVTEALENTET 485

Query: 238 ----LLAILYAMLTML 249
               L  I  A+L M+
Sbjct: 486 GRGVLAGIGIALLAMM 501


>gi|300172857|ref|YP_003772022.1| OpuABC protein [Leuconostoc gasicomitatum LMG 18811]
 gi|299887235|emb|CBL91203.1| OpuABC [Leuconostoc gasicomitatum LMG 18811]
          Length = 568

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A VISL+       + AKS +   ++ PILD MQ++P   +L   V +F + + PG    
Sbjct: 102 ASVISLVIGIPLGIITAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P  L E + SF  + WQK   L +P +    +
Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVALVEAADSFGSTTWQKLIKLELPNARNTIL 212

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  D+
Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQRADV 250


>gi|320120628|gb|EFE28017.2| ABC transporter permease [Filifactor alocis ATCC 35896]
          Length = 257

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    + A P   F  L +  +S  +L+  +++S LM+      I  NV++G    P 
Sbjct: 91  LEPIITTVQATPVVSFIILCLIWLSSKNLS--IFISFLMVIPI---IYRNVLSGIDNIPK 145

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              E+A+ F +   R  R I +  +FPY+ +    +C  AW + I +EV
Sbjct: 146 GLLEMATVFRVDKKRLVRIIYVSEVFPYFRSACNISCALAWKSGIAAEV 194


>gi|170692256|ref|ZP_02883419.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142686|gb|EDT10851.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 288

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 34/191 (17%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQW 462
           F+P I   +    Q++   PA    PLV+           LW  +       L+  G  +
Sbjct: 116 FKP-IEIALDSTVQMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFF 163

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G  +  ++  E+A S+ + G   +R++ILPG  P  + G   A G  W   I
Sbjct: 164 PIYVNTFHGIRSVDSNLIEMARSYGVKGVALYRHVILPGALPSILVGVRFAFGLMWVTLI 223

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FL 573
           V+E  S        +G+G     + E      VV+G+L+         VLA  L R    
Sbjct: 224 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERVSLR 277

Query: 574 WHPLYLYGTRC 584
           WHP Y  G + 
Sbjct: 278 WHPAYQRGGKA 288


>gi|240169163|ref|ZP_04747822.1| binding-protein dependent transport system inner membrane protein
           [Mycobacterium kansasii ATCC 12478]
          Length = 274

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R+ +   I S + I  G  IG  P  +  ++P A  L   PA  + P++V      
Sbjct: 80  VSVRRIAIGFAIGSTVGILAGAVIGTSPLAAKILEPTALTLIPVPAVAWIPVLVIVFGIG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+       L+  G+   ++    AG  +   D  EVA  +  + W   R ++LP   P
Sbjct: 140 ELSK----VTLVAIGSATTLILATAAGIRSASQDLVEVAQLYEKSRWTVLRTVLLPSAAP 195

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             V  A  A   +W   + +EV
Sbjct: 196 SIVASARVAMALSWTLLVAAEV 217


>gi|328542595|ref|YP_004302704.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326412341|gb|ADZ69404.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 294

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVWN 149
           A+S RL  ++ P+LD+MQ++P+  +L   V+ F     GKV G     I+AI    ++ N
Sbjct: 125 ARSDRLQALVNPVLDLMQTMPVFVYLIPVVMIF---GLGKVPGVIAVVIYAIPPMIRLTN 181

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +      +  D+ E + +F  S WQK   + +P ++P +       M+G    ++ 
Sbjct: 182 LGIRL------VSPDVLEAADAFGSSSWQKLRNVQLPLALPTI-------MAGINQCIMM 228

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           S  +VV  ++I + G+G  +  AI  Q
Sbjct: 229 SLAMVVVASMIGVRGLGQPVLQAINNQ 255


>gi|13378312|gb|AAK18747.1| ProW-like protein [Enterobacter amnigenus]
          Length = 295

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 110 ARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 164

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 165 TI---LGINQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 217

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 218 VVIASMIAVG-------GLGQMVLRGIGRLDM 242


>gi|41406244|ref|NP_959080.1| hypothetical protein MAP0146 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394592|gb|AAS02463.1| hypothetical protein MAP_0146 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 233

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L+A +RRL   L P +   +++P L ++   +++F      K++   + A F ++T+   
Sbjct: 68  LSATARRL---LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAIGAFFPVYTTTA- 123

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                   +L +I   L EV R++   G      + +P + P LV  + + ++  W FVV
Sbjct: 124 -------SALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVV 176

Query: 209 ASEMIV 214
           A+E+I 
Sbjct: 177 AAELIA 182


>gi|300789773|ref|YP_003770064.1| glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299799287|gb|ADJ49662.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 227

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++VI+L+           + R G+ LV   + ++++P LG +TF  + F       +IG 
Sbjct: 35  SLVIALVIAVPLGLFVGHTGRGGVALVSAGNAIRALPTLGLVTFLFLLFTESVTSTIIGL 94

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            + A+  I            Y  L      + + +    ++GWQ+ W + VP S+P
Sbjct: 95  VVLAVPPILAGT--------YAGLQATDHGVVDAAEGVGMTGWQRLWQVEVPISLP 142


>gi|297617500|ref|YP_003702659.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297145337|gb|ADI02094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 264

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 26/143 (18%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+  +++ +       + A SR+      P +D ++ +P+   +   ++YF       
Sbjct: 74  RVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLMILYFG------ 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG +   +  IF    + +   +  ++  +P++L   + +    G   +  + +P S+P
Sbjct: 128 -IG-DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLP 185

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
           G++ N+ + M   W ++V +E++
Sbjct: 186 GIMDNLRICMGWAWTYLVVAELV 208



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++RV+   ++A+++ IP+GI +       +  +PF   +   P     PL+   + Y+
Sbjct: 70  VSLYRVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLM---ILYF 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++++ + GT + ++  V    S  P +    A +    G   +  ++LP   P
Sbjct: 127 GIGDFEKVAVIFV-GTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +       G AW   +V+E+ +        +GLG  I  S        + +G+L++
Sbjct: 186 GIMDNLRICMGWAWTYLVVAELVA------ANSGLGFMILRSQRFLQTDRIFVGLLVI 237


>gi|83649325|ref|YP_437760.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83637368|gb|ABC33335.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 338

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 20/200 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V V   +A +I +PVG+  G    + + + P  Q+        + PLV   VS  +
Sbjct: 131 SLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVY 190

Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +  +       +  ++ +     W  L N + G S    D   V+    ++     R ++
Sbjct: 191 VTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSLVLRLSWTTKVRKVV 250

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + GS     LG
Sbjct: 251 LPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNS--LG 302

Query: 559 VLIMCCFVL-----ALNRFL 573
            +++  F +     AL+R +
Sbjct: 303 RIMVAVFTIGFIGFALDRVM 322



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  + +DL  VS   RLS   K   + +PF++P +   M +S+  GW  ++A+EM+    
Sbjct: 224 VSGLDKDLNNVSLVLRLSWTTKVRKVVLPFAVPMIFTGMRLSLGVGWMVLIAAEMLAQN- 282

Query: 218 TVIPLPGIGSYI 229
                PG+G ++
Sbjct: 283 -----PGLGKFV 289


>gi|89893966|ref|YP_517453.1| hypothetical protein DSY1220 [Desulfitobacterium hafniense Y51]
 gi|219668341|ref|YP_002458776.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|89333414|dbj|BAE83009.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538601|gb|ACL20340.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 279

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A+      VL PILD MQ++P   +L   +++F            L  + AIF + ++
Sbjct: 111 LGARHNGFHRVLSPILDFMQTMPSFVYLIPALMFF-----------SLGTVSAIFATVIF 159

Query: 149 NMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            M   +  +   I   P DL EV  +F  +  Q  W + +P ++P    G+   MM+S+S
Sbjct: 160 AMPPVIRLTALGIRQVPADLVEVGEAFGSNSRQMLWKIQLPLALPTIMAGINQTMMLSLS 219

Query: 202 GGWFFVVASEMI 213
                VV S MI
Sbjct: 220 ----MVVISAMI 227


>gi|259907586|ref|YP_002647942.1| glycine betaine transporter membrane protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963208|emb|CAX54692.1| Glycine betaine/L-proline transport system permease protein
           [Erwinia pyrifoliae Ep1/96]
 gi|283477428|emb|CAY73344.1| Glycine betaine/L-proline ABC transport system,inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336


>gi|124485881|ref|YP_001030497.1| hypothetical protein Mlab_1061 [Methanocorpusculum labreanum Z]
 gi|124363422|gb|ABN07230.1| binding-protein-dependent transport systems inner membrane
           component [Methanocorpusculum labreanum Z]
          Length = 280

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T + +L A VI+L  +      AA+S  L   L PILD MQ++P   +L   V++F    
Sbjct: 94  TVVLVLIATVIALALSIPIGIGAARSDTLNAALRPILDFMQTMPSFVYLIPAVIFF---G 150

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     IFA     +   T  + Q    +P +L EV+ +F  +  QK + + +P 
Sbjct: 151 LGSVPGIIATVIFA-MPPALRLTTLGIRQ----VPVELIEVADAFGATPRQKLFKVQLPV 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +   +       V + MI  G       G+G  + + I+  D+     A L 
Sbjct: 206 ALPTIMAGVNQCIMLALSMTVIASMIGAG-------GLGYQVLVGIQRVDIGMGFEAGLA 258

Query: 248 MLGVIFLYDQL 258
           ++ +  ++D++
Sbjct: 259 IVILAIIFDRI 269


>gi|116749646|ref|YP_846333.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698710|gb|ABK17898.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 314

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+ +  +IA +I IP+G+ +G+     +   P  + L   P   + PL V       
Sbjct: 123 SMGRIYLGFMIACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLSVIMFPLTE 182

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  L+  G  + I+ N + G  +   D+ + A S        +  IILPG  P 
Sbjct: 183 HS----IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDIILPGALPS 238

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             TG     G AW   + +E+ + G+      GLG    ES    ++P ++LG+ I+
Sbjct: 239 IFTGMTVGMGLAWVMVVAAEMVAGGY------GLGYMTWESYILIAYPRIILGMFII 289


>gi|318081537|ref|ZP_07988853.1| binding-protein-dependent transporter inner membrane component
           [Streptomyces sp. SA3_actF]
          Length = 270

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL +  +    
Sbjct: 79  SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             P +++  L  F      L  V+A   G +A      + A          +  +++P  
Sbjct: 139 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 191

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ + GA    G +W   + +E+ +         GLG  +  +      P + +G+L +
Sbjct: 192 TPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFVGLLTI 245

Query: 563 CCFVLALNRFL 573
               L ++R L
Sbjct: 246 GVVGLVMDRLL 256



 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 14/163 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P +   +++P L  +   +V          IG E   +F IF +       +  Q +
Sbjct: 110 LLEPYVQFFRAVPPLAIIPLAIVLLG-------IG-ETPKVFVIFLASFLATVVAALQGV 161

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
               R L + +R         F  + +P S P L+    + +   W  +VA+E+I     
Sbjct: 162 TATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAELIAADK- 220

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                G+G  +  A    DL  I   +LT+  V  + D+LL R
Sbjct: 221 -----GLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLR 258


>gi|310764905|gb|ADP09855.1| glycine betaine transporter membrane protein [Erwinia sp. Ejp617]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336


>gi|219855452|ref|YP_002472574.1| hypothetical protein CKR_2109 [Clostridium kluyveri NBRC 12016]
 gi|219569176|dbj|BAH07160.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 260

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ I+++ II I  G+  G    +   ++P    + A P  V   ++++ V +  
Sbjct: 77  SVIRVIIGILLSVIIGIVFGLTAGLNKFVEELLEPVVITVKATP--VISIIIIALVWFNS 134

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  ++ ++L+ F   +    NV+ G  +      ++A+ F +      + I LP I  Y
Sbjct: 135 SNVVIFTAILICFPIVYT---NVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNY 191

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            V+G +   G  W  S+ SEV S   I   + GL    A++T
Sbjct: 192 IVSGILMCMGIGWKVSVASEVLS---IPRYSIGLNLLSAKTT 230


>gi|256847670|ref|ZP_05553115.1| ABC transporter permease component [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715359|gb|EEU30335.1| ABC transporter permease component [Lactobacillus coleohominis
           101-4-CHN]
          Length = 510

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKV 131
           L A++I+++     A L    RR+    + +  I+Q+IP L  L   + +  +   P  V
Sbjct: 28  LLALLIAIVIAIPLAILLKDHRRIAEACLQVAGIVQTIPSLAILGLLIPLVGIGTVPA-V 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   L AI  IF +         Y  L  I  +LEE + +F L+ W+K   L +P +MP 
Sbjct: 87  IALVLYAIMPIFQN--------TYAGLTQIAPNLEEAATAFGLTKWKKLQRLELPLAMPM 138

Query: 192 LVWNMMMSM 200
           ++  + +S+
Sbjct: 139 ILSGIRISL 147


>gi|157691067|ref|YP_001485529.1| glycine betaine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157679825|gb|ABV60969.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 281

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L+A+VIS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVLTAVVISIVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IF++       MT      +  +P DL E + +F  + +Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFSM--PPTIRMTI---LGIKQVPSDLIEATEAFGSTTFQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|149201337|ref|ZP_01878312.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149145670|gb|EDM33696.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 421

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+V   + +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +  +  AG S         A S   + W+  R++I+P   P 
Sbjct: 290 SGK----IILLFLAALWIMTISARAGVSGVAISKVHAAYSLGASKWQLMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++      GK+I         +F + +W MT S    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMTISARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
                  + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++
Sbjct: 316 AISKVHAAYSLGASKWQLMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELV 367


>gi|324113735|gb|EGC07710.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 263

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      ++    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESARIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|264676297|ref|YP_003276203.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni
           CNB-2]
 gi|262206809|gb|ACY30907.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni CNB-2]
          Length = 285

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A++I +P+GI +G    I +  +PF       PA+ F PL++  V   
Sbjct: 93  MTVWRVMGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFARYLPASAFIPLLIMWVGIG 152

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  LS++ I G  + +   V+        D  E A +   T     R ++LPG  P
Sbjct: 153 EAQK---LSIIFI-GCFFQLTLMVMMIVGNARRDLVEAAYTLGSTDSSVIRRVLLPGAAP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                     G  W   +V+E+          +G+G  I +S    +   ++ G++I+
Sbjct: 209 EIAEALRQVLGLGWTYVVVAELIG------AASGIGHMIMDSQALMATDNIIAGIVII 260


>gi|329901029|ref|ZP_08272674.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327549276|gb|EGF33852.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 273

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M+RVVV  ++ + + +P+G+ +G    + + + P  Q+L   P   + PL  S + +  
Sbjct: 80  SMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPPIAYIPL--SILWFGL 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            NP      L+  G  + +L N IAG     + +   A +   +    +  ++LP   PY
Sbjct: 138 GNPP--AVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQSTLFLRVMLPAAVPY 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV------ 559
            ++G     G A+   IV+E+ +         GLG  I E+ E     +++ G+      
Sbjct: 196 ILSGVRIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMISIGML 249

Query: 560 -LIMCCFVLALNRFL--WH 575
            L++   V  LN  L  WH
Sbjct: 250 GLVIDLAVTRLNNHLLRWH 268


>gi|292489182|ref|YP_003532069.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292900299|ref|YP_003539668.1| glycine betaine/L-proline ABC transporter permease [Erwinia
           amylovora ATCC 49946]
 gi|291200147|emb|CBJ47273.1| glycine betaine/L-proline ABC transporter, permease protein
           [Erwinia amylovora ATCC 49946]
 gi|291554616|emb|CBA22278.1| Glycine betaine/L-proline ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312173341|emb|CBX81596.1| Glycine betaine/L-proline ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336


>gi|227509013|ref|ZP_03939062.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191490|gb|EEI71557.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 237

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 8/171 (4%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +D++      H+L Q+   +  R+  A   ++LF      ++  SR++  +  P++  ++
Sbjct: 27  IDLLQNGYKGHTLWQHLWASLQRLFIAYFAAVLFAIPLGLVSGYSRKVRAIFEPVITFLR 86

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            +P LG+ T  +++       K++   L A   I+ S V          +  +  D    
Sbjct: 87  PLPPLGYYTIIILWMGTGNTSKIVLLFLGAFSPIYVSCV--------AGVSRVKIDYLNR 138

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +R+   + +Q F ++ +P S+P +   +  +MS  +   VA+EM+  G  +
Sbjct: 139 ARTLGANQFQVFSHVVLPASLPDIFVGLRNAMSVAYATSVAAEMVAAGSGI 189


>gi|254502502|ref|ZP_05114653.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222438573|gb|EEE45252.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 421

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 16/161 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK+I         +F + +W MT +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIGESGKII--------LLFLAALWIMTIAARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S  Q  W++ VP S+P +     ++M   W  VVA+E++        
Sbjct: 316 NISKVHAAYSLGASKSQILWHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 371

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
             G G  I  A K Q L  I+   + ++GVI F  D L+ R
Sbjct: 372 --GAGKMIVAASKFQ-LTDIVIMGIILIGVIGFAIDVLMRR 409


>gi|186471608|ref|YP_001862926.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197917|gb|ACC75880.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 294

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +++A V SL+         A+++R+ MVL  +LD MQ++P   +L   V+ F +   P  
Sbjct: 94  VIAATVFSLVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLGRVP-- 151

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A +A I       V   T  + Q    +  +L E  RSF  +  Q  W + +P ++P
Sbjct: 152 ---AVIATIVFAMPPVVRLTTLGIRQ----VREELLEAGRSFGSTDAQLLWKVQLPNALP 204

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               G+   +MM++S     VV + MI  G       G+G Y+   I+  D+
Sbjct: 205 SIMAGVNQTIMMALS----MVVVASMIGAG-------GLGEYVLSGIQRLDI 245


>gi|307352362|ref|YP_003893413.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
 gi|307155595|gb|ADN34975.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
          Length = 284

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 25/177 (14%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   ++++  I+LL        A+++     VL P LD MQ++P   +L   V++F   
Sbjct: 99  ETLALVITSTFIALLIAIPTGITASRNDIFDRVLRPFLDFMQTMPSFVYLIPAVIFFAL- 157

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             G V G     IFA+  + ++ N+       +  IP++L EV+ SF  +  QK   + +
Sbjct: 158 --GDVPGVIATVIFAMPPAIRLTNL------GIRQIPKELNEVADSFGATPNQKLIKVQL 209

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           P +MP    G+   +M+S+S      V + MI  G       G+G  + + I+  D+
Sbjct: 210 PVAMPTIMAGVNQCIMLSLS----MTVIASMIGAG-------GLGYNVLVGIQRVDI 255


>gi|239827957|ref|YP_002950581.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. WCH70]
 gi|239808250|gb|ACS25315.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. WCH70]
          Length = 281

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++FR     ++ + I I  GI +GF       I P  Q+L   P     PL +    + 
Sbjct: 85  VSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVIDPTVQMLRTIPHLAVAPLFILWFGFG 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+  G  + +  N   G         +VA   H + W     +I+P   P
Sbjct: 145 ETSK----ILLIAKGAFFPVYVNTFLGIRGVDAKLFDVARILHFSRWEKITLLIIPSALP 200

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   + G AW   +V+E+         T G+G  + ++ +  +   V +G+++   
Sbjct: 201 TILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 254


>gi|313682504|ref|YP_004060242.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155364|gb|ADR34042.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum
           kujiense DSM 16994]
          Length = 263

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+     +++L       L   S+   + L P + I++ +  L +L   +  F ++    
Sbjct: 74  RVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAWLPLLLFVFKDI---- 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L AI  IF + +W +  +    + ++  D   V++  +L+ ++K + + +P ++P
Sbjct: 130 ----NLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTPFEKVFQIILPVAVP 185

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +   M +S+   W  +VA+EM+  G
Sbjct: 186 FIFTGMRLSLGIAWLVIVAAEMLTGG 211



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +   +D   + W    ++ RV     +A ++ +P+G+ IG   +    + PF Q+L    
Sbjct: 55  YINNEDDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVS 114

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488
              + PL++      +L      ++  IF T  W I+ N   G  +   D+  VA    +
Sbjct: 115 PLAWLPLLLFVFKDINLT-----AITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQL 169

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           T +     IILP   P+  TG   + G AW   + +E+ + G
Sbjct: 170 TPFEKVFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGG 211


>gi|163746782|ref|ZP_02154139.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161379896|gb|EDQ04308.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 250

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           PF   R++       A  + I  + + L G+    +P   + +  +  +   L Q A  +
Sbjct: 2   PFAGHRVWRGAVSF-ALAMAIWQLVVTLSGVPRFILPGPWLVLQALGANAALLWQNALWS 60

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +   + + ++     A L   SRR   +L P+L + Q++P+        ++     P
Sbjct: 61  AGNLALGLGVGIILGVETAVLLTLSRRARWLLRPMLVVAQAVPVFALAPVITLWLGYGMP 120

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K++   L   F I ++        ++  L  +P  L ++SR    S W++   L +P +
Sbjct: 121 SKIVTIALVTYFPIASA--------LFDRLMALPPGLSDLSRLAGASRWRETLLLRLPHA 172

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL+  + +++      V     +++G+ V    G+G ++ L    +   A+++A L +
Sbjct: 173 VPGLISGLRLAV------VYGPLAVLIGEWVGSSRGLG-HLMLMANGRGQTALMFAALVV 225

Query: 249 LGVIFLYDQLLFRPMIVWSNK 269
           L  + L   ++   +  W+ +
Sbjct: 226 LAALSLVLWVVVEALARWAAR 246


>gi|319940944|ref|ZP_08015281.1| binding-protein-dependent transport system inner membrane component
           [Sutterella wadsworthensis 3_1_45B]
 gi|319805517|gb|EFW02312.1| binding-protein-dependent transport system inner membrane component
           [Sutterella wadsworthensis 3_1_45B]
          Length = 264

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 14/189 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++  V+  +I +I  + VG+W+   P  ++   PF +   + P  +  P+      ++
Sbjct: 72  VTLYETVMAFVIGTIAGLAVGLWLALSPVAAAVADPFIKGFNSMPRVILAPIF---AVWF 128

Query: 445 HLNP--NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            L P   + L   ++F   + + FNV  G      +    A     T  +  RY+ LP  
Sbjct: 129 GLGPASKIALGFTLVF---FIVFFNVYQGVREVNPNVLASAKMLGATHRQLLRYVYLPSA 185

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +  +   T+ G A+ A+++ E            G+G  I ++        V+ G+L++
Sbjct: 186 MSWVFSSLHTSVGMAFVAAVIGEYLG------SAEGVGYLILQAETTFDMNTVMAGILVL 239

Query: 563 CCFVLALNR 571
               L L+R
Sbjct: 240 TACALILDR 248


>gi|33593593|ref|NP_881237.1| ABC transport protein, inner membrane component [Bordetella
           pertussis Tohama I]
 gi|33572949|emb|CAE42890.1| ABC transport protein, inner membrane component [Bordetella
           pertussis Tohama I]
 gi|332382999|gb|AEE67846.1| ABC transport protein, inner membrane component [Bordetella
           pertussis CS]
          Length = 264

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 23/240 (9%)

Query: 344 LDIFWFCVVCGVAI-----GIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVV 392
           L IF   ++CG+A+     G  + SI +     T ++ + ++  G I      ++ R+V 
Sbjct: 17  LTIFIVSILCGLAVWAWTSGSLFPSILFPGPQATLREGVRMLESGSIIVDAAVSLARIVA 76

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              I S I I VG+ IG+ P + +   P+ Q     P   +   V   + ++ +     +
Sbjct: 77  GFTIGSAIGIVVGLLIGYFPMVRTAFNPYLQFFRFVPPIAW---VSPAMIWFGVGETSKI 133

Query: 453 SLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             ++++GT + +  + +AG A A  N  +  A  F  T W+ +R++++P      +TG  
Sbjct: 134 -FIIVYGTVFTVALSAVAGVADAHVNKIRA-AQMFGATRWQIFRHVVIPSTVSPILTGMR 191

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + G ++   I +E+ +        +G+G  I  S    +  ++ +G+ ++ C     +R
Sbjct: 192 VSMGISFMTVIAAEMLA------AESGIGYLILNSRLWMATDKIFVGIFVLGCLGYGADR 245


>gi|39935744|ref|NP_948020.1| putative ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|192291331|ref|YP_001991936.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Rhodopseudomonas palustris TIE-1]
 gi|39649597|emb|CAE28119.1| putative permease protein, subunit of ABC transporter
           [Rhodopseudomonas palustris CGA009]
 gi|192285080|gb|ACF01461.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 294

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A+++ IP+G+ IG  P + + + P   LL   P   + PL    + ++ L P   +  L
Sbjct: 111 LAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 166

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + IL N + G  +      E A     +G + +R ++LP   P    G      
Sbjct: 167 VFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQLFRSVVLPAALPSIFNGLRLGAS 226

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            AW   +V E+           GLGA I + 
Sbjct: 227 FAWILIVVGEMTGVPE------GLGAVIMDG 251


>gi|167573338|ref|ZP_02366212.1| taurine ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 285

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI I     +   + P  +     P   + PL+V        +      +L+I+ T 
Sbjct: 111 IPVGILIATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDTS-----KILLIYLTM 165

Query: 462 WYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           +  L     AGA+         A+S   T ++  R+++LP   P  +TG   A G  W+ 
Sbjct: 166 FAPLTIATAAGANGVSASRLRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWST 225

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +E+ +       T GLG  +  ++       VV G+L++    LAL 
Sbjct: 226 LVAAELIA------ATRGLGFMVYSASRFLVTDVVVAGILVIGAIALALE 269


>gi|163795907|ref|ZP_02189871.1| putative BC-type proline/glycine betaine transport system, permease
           component [alpha proteobacterium BAL199]
 gi|159178940|gb|EDP63476.1| putative BC-type proline/glycine betaine transport system, permease
           component [alpha proteobacterium BAL199]
          Length = 288

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 25/202 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +LSA ++ +L        AA +R     + PILD+MQ+IP   +L  T++ 
Sbjct: 95  EATTETLALVLSATLVCVLIGVPVGIYAAHNRWFYSGIRPILDLMQTIPTFVYLIPTLML 154

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +++          + N+P+ L E   +F  + WQ   
Sbjct: 155 FGLGVVPGLISTVVFAVPAPIRLTEL---------GVRNVPKPLIEAGEAFGATRWQLLL 205

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S           +VV   ++   G+G  +  A+   +
Sbjct: 206 KVELPHAMPTIMAGVTQCIMLSLS-----------MVVIAALVGANGLGKPVVRALNTVN 254

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +     A L ++ V  L D+++
Sbjct: 255 IAQGFEAGLAIVIVAILMDRIM 276


>gi|115391880|dbj|BAF33367.1| putative transporter protein [Streptomyces sp. NL15-2K]
          Length = 257

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 19/189 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IAS   I VG+ I   PH+        + L   P+    PL V  +    L   L   LL
Sbjct: 70  IASCAGIVVGVLISVVPHLREATASTIEFLRPIPSVALIPLAV-LLYGSELRSVL---LL 125

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +++ + W +L  V+ G        +E A S+ +  W   R+++ P   PY +TG   A  
Sbjct: 126 VVYASFWQVLIQVLYGVQDVDPVAEETARSYGLGTWARIRHVLWPTALPYVMTGVRLAAA 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVL 567
            A   +I +E      + +   GLG  I  +    + PE+        VLG+LI      
Sbjct: 186 VALILAITAE------LIIGAPGLGKRIGVAQTSQAVPEMYALIVVTGVLGLLINVGART 239

Query: 568 ALNRFL-WH 575
              R L WH
Sbjct: 240 VERRALAWH 248


>gi|37525249|ref|NP_928593.1| glycine betaine transporter membrane protein [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784676|emb|CAE13576.1| Glycine betaine/L-proline transport system permease protein proW
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 361

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 176 AHSKRAAKIIQPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVIVTIIFAL--PPIVRL 230

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 231 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 284 VVIASMIAVG-------GLGQMVLRGIGRLDM 308


>gi|166154199|ref|YP_001654317.1| ABC transporter permease [Chlamydia trachomatis 434/Bu]
 gi|166155074|ref|YP_001653329.1| ABC transporter permease [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335445|ref|ZP_07223689.1| ABC transporter permease [Chlamydia trachomatis L2tet1]
 gi|165930187|emb|CAP03671.1| ABC transporter permease [Chlamydia trachomatis 434/Bu]
 gi|165931062|emb|CAP06625.1| ABC transporter permease [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 589

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +++Q + N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A
Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267
            E +          G+G  I  + +  D+   L  +  LT+L +   Y  LL      + 
Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTVLTLSLFYSVLLLERSTFFF 243

Query: 268 NKFRLERTTGIYPADSWVLYL 288
             FR+E+T+       WV  L
Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262


>gi|118463383|ref|YP_879437.1| aliphatic sulfonates ABC transporter permease [Mycobacterium avium
           104]
 gi|254773186|ref|ZP_05214702.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118164670|gb|ABK65567.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium avium 104]
          Length = 233

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L+A +RRL   L P +   +++P L ++   +++F      K++   + A F ++T+   
Sbjct: 68  LSAAARRL---LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAVGAFFPVYTTTA- 123

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                   +L +I   L EV R++   G      + +P + P LV  + + ++  W FVV
Sbjct: 124 -------SALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVV 176

Query: 209 ASEMIV 214
           A+E+I 
Sbjct: 177 AAELIA 182


>gi|253995479|ref|YP_003047543.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
 gi|253982158|gb|ACT47016.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
          Length = 258

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   +  R++    I  L   V+  L    + +     P  + ++ +P + F+   
Sbjct: 60  ELQSHLHDSLYRLVLGFAIGSLLGLVFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPML 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F      K++    AA F I        T + Y ++ NIP    EVS+ ++LS    
Sbjct: 120 VMIFGVEETFKIVVVAKAAFFPI--------TLATYDAVKNIPSSYFEVSKVYQLSHVSL 171

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
              + +P ++P ++  + +++   W  +VA+E+I          GIG  + + 
Sbjct: 172 VRQVILPATVPPILTGLRLALGRSWMVLVAAELIAADS------GIGQMMEMG 218



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 30/154 (19%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+V+   I S++ +  G+ +G    I +   P    L   P   F P+         
Sbjct: 68  SLYRLVLGFAIGSLLGLVFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPM--------- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFP-------------NDFKEVASSFHITGWR 492
                   L+MIFG +      V+A A+ FP             + + EV+  + ++   
Sbjct: 119 --------LVMIFGVEETFKIVVVAKAAFFPITLATYDAVKNIPSSYFEVSKVYQLSHVS 170

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             R +ILP   P  +TG   A G +W   + +E+
Sbjct: 171 LVRQVILPATVPPILTGLRLALGRSWMVLVAAEL 204


>gi|153955011|ref|YP_001395776.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146347869|gb|EDK34405.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
          Length = 258

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ I+++ II I  G+  G    +   ++P    + A P  V   ++++ V +  
Sbjct: 75  SVIRVIIGILLSVIIGIVFGLTAGLNKFVEELLEPVVITVKATP--VISIIIIALVWFNS 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  ++ ++L+ F   +    NV+ G  +      ++A+ F +      + I LP I  Y
Sbjct: 133 SNVVIFTAILICFPIVYT---NVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNY 189

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            V+G +   G  W  S+ SEV S   I   + GL    A++T
Sbjct: 190 IVSGILMCMGIGWKVSVASEVLS---IPRYSIGLNLLSAKTT 228


>gi|116050271|ref|YP_790912.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389262|ref|ZP_06878737.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313110773|ref|ZP_07796630.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|115585492|gb|ABJ11507.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310883132|gb|EFQ41726.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 254

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   W IL N  AG       + +++ S   T W   R +ILPGI  + +TG   A 
Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           G  W   +  E+         + GLG YI ++ ++ ++ E++
Sbjct: 189 GILWIVLVPCEMLGV------SAGLGYYILDTRDRLAYSELM 224


>gi|268319161|ref|YP_003292817.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus johnsonii
           FI9785]
 gi|262397536|emb|CAX66550.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus johnsonii
           FI9785]
          Length = 515

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131
           L A++I+++ T   A +    ++     + I  I+Q+IP L  L   + +  +   P  V
Sbjct: 28  LIALLIAMVITIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA-V 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   L AI  IF +         Y  L  IP +LEE + +  L+ W+K   L +P +MP 
Sbjct: 87  IALVLYAIMPIFQN--------TYSGLTEIPENLEEAATALGLTKWKKLQRLEIPMAMPM 138

Query: 192 LVWNMMMSM 200
           +V  + +++
Sbjct: 139 IVAGIRIAL 147


>gi|117164559|emb|CAJ88105.1| putative transport system integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 311

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 14/221 (6%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           + + +    +L  IW    ++ R ++  ++A  I  P+G+ +     + + + P    L 
Sbjct: 96  VADAWRQGTLLDYIW---TSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQ 152

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P+  + P     V +  LN N  +  +++ G    I   ++AG    P  F     + 
Sbjct: 153 SLPSVAWVP---PAVLWLGLN-NSMMYAVILLGAVPSIANGLVAGIDQIPPLFLRAGRTL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAE 545
             TG R   +I++PG  P Y+ G       +W + + +E +AS   + +   GLG  +  
Sbjct: 209 GATGLRGAWHIVMPGALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV---GLGQLLEN 265

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                S  +V L + ++    +A++  ++ PL     R LR
Sbjct: 266 GRNNASISQVFLAIFLILLVGIAIDLLIFSPLE---RRVLR 303


>gi|115377139|ref|ZP_01464353.1| phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365848|gb|EAU64869.1| phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
          Length = 296

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 42/210 (20%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFL-----------TFTVVYFMNLYPGKVIGAELAAIF 140
           RRL   L PI++++  IP  +LGF            TF   Y +N      +G  LA + 
Sbjct: 100 RRLREFLKPIIELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAG-LGLALAIVP 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV------- 193
            IFT            +L  +PR   E S +   + W+  W + +P + PG++       
Sbjct: 159 VIFTVA--------EDALTAVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGF 210

Query: 194 -----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                  M++ M+ G   +V+S +   GD+V  L    + IA  + E  + +  Y++L  
Sbjct: 211 GRAIGETMIILMASGNAAIVSSSL---GDSVRSL---SATIAAEMGEVVVGSPHYSLLFF 264

Query: 249 LGV-IFLYDQLLFRPMIVWSNKFRLERTTG 277
           +GV +F++  +L     VW+ K  L+R TG
Sbjct: 265 IGVELFVFTFVLNMVASVWTKKV-LKRLTG 293


>gi|307296891|ref|ZP_07576708.1| binding-protein-dependent transport systems inner membrane
           component [Sphingobium chlorophenolicum L-1]
 gi|306877612|gb|EFN08839.1| binding-protein-dependent transport systems inner membrane
           component [Sphingobium chlorophenolicum L-1]
          Length = 272

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+   ++I +    +   +A  SR   + + P++ I ++IP L      +V+F      K
Sbjct: 81  RVAIGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGIGETPK 140

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V       +F ++         ++Y  +  +   L + ++SF LS W++ W++ +P ++P
Sbjct: 141 VALIAFGTVFPVY--------LNLYSGIRGVDLRLLDAAKSFGLSRWEQIWHVVLPSALP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            L+  +  ++S     +V +E I
Sbjct: 193 SLLVGLRYALSVAILVLVVAEQI 215


>gi|260867106|ref|YP_003233508.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|257763462|dbj|BAI34957.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str.
           11128]
          Length = 263

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLAPIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262


>gi|254453772|ref|ZP_05067209.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198268178|gb|EDY92448.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 687

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 19/172 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA S  +  ++ PI DI+Q++P    L   ++ F           +  A+ AI    +  
Sbjct: 525 AATSDTVSRIIRPINDILQTLPQFVLLIPALMLFQV--------GDFTALLAIIAYAIVP 576

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M     Q L  +P  L +  ++   S WQ FW + +P S+P     +++ ++    +V+ 
Sbjct: 577 MIRYTEQGLRAVPSTLVDAGKACGCSAWQLFWDVRLPISLP----QILIGINQTILYVLG 632

Query: 210 SEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +I  +VG T     G+G  I +A+ + D  A + A   M  +    D++L
Sbjct: 633 MLVIAALVGTT-----GLGQAIYVALSQADAGAGIVAGFGMALIAMTADRIL 679


>gi|83593811|ref|YP_427563.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83576725|gb|ABC23276.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 357

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 25/155 (16%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QV 147
           L A+S RL  +  P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    ++
Sbjct: 153 LMARSDRLAKLSRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFALPPLIRL 209

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
            N+       +  +P DL E +RSF  S  Q    + +P ++P    G+   +M+++S  
Sbjct: 210 TNL------GIRQVPEDLVEAARSFGASKTQLLTKVQLPLALPTIMAGINQTLMLALS-- 261

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              VV + MI VG       G+G  +   I   D+
Sbjct: 262 --MVVIASMIAVG-------GLGQMVLRGIGRLDM 287


>gi|167566227|ref|ZP_02359143.1| taurine ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
          Length = 285

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI I     +   + P  +     P   + PL+V        +      +L+I+ T 
Sbjct: 111 IPVGILIATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDAS-----KILLIYLTM 165

Query: 462 WYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           +  L     AGA+         A+S   T ++  R+++LP   P  +TG   A G  W+ 
Sbjct: 166 FAPLTIATAAGANGVSASRVRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWST 225

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +E+ +       T GLG  +  ++       VV G+L++    LAL 
Sbjct: 226 LVAAELIA------ATRGLGFMVYSASRFLVTDVVVAGILVIGAIALALE 269


>gi|261822715|ref|YP_003260821.1| glycine/betaine ABC transporter [Pectobacterium wasabiae WPP163]
 gi|261606728|gb|ACX89214.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 400

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 216 ARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 270

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 271 TI---LGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 323

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 324 VVIASMIAVG-------GLGQMVLRGIGRLDM 348


>gi|121603490|ref|YP_980819.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120592459|gb|ABM35898.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 287

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 17/170 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA-AIFAIFTSQVWNMT 151
           SR     + P  D++  +P+LG++   +++         +G E A  + A+  + V  + 
Sbjct: 120 SRTFKAYVFPTFDVLAQLPVLGWIPLLIIF---------VGIEEALKVTAVSIAVVVPVA 170

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            S    + NIP+ L EV R ++ S  Q    + +P + P L   +   +   W  V+  E
Sbjct: 171 LSTLSGIANIPQALLEVGRVYQFSALQTIRRIVLPAAAPSLFTGLRQGVMQAWISVIFVE 230

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           ++   +      G+G ++A +     +  ++ AML  +GV+ +  +L  R
Sbjct: 231 LLSSSE------GLGFFMAYSRSLSQIDMVIVAMLA-IGVVGIVIELGLR 273


>gi|332968101|gb|EGK07188.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Desmospora sp. 8437]
          Length = 316

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGF--LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           VL P+++++  IP  + GF  LT  + Y  N + G    + LA +  +    +  +T   
Sbjct: 133 VLQPVIELLVGIPSVVYGFIGLTLLIPYIRNTHGGSGF-SLLAGVIVLSVMILPTITSIA 191

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L NIPR + E S +   + WQ    + +  S+PGL+  +++ M+  +   +A +M++
Sbjct: 192 VDTLQNIPRKIREASYALGATRWQTIRRVLIRTSLPGLMTGVVLGMARAFGEALAVQMVI 251

Query: 215 VGDTVIP 221
                IP
Sbjct: 252 GNSGQIP 258


>gi|194017644|ref|ZP_03056255.1| glycine betaine transport system permease protein opuAB [Bacillus
           pumilus ATCC 7061]
 gi|194010916|gb|EDW20487.1| glycine betaine transport system permease protein opuAB [Bacillus
           pumilus ATCC 7061]
          Length = 284

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L+A+VIS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 95  QTLALVLTAVVISIVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYL-LPAIFFFNI 153

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IF++       MT      +  +P DL E + +F  + +Q+ + + +P
Sbjct: 154 --GVVPGVVASVIFSM--PPTIRMTI---LGIKQVPADLIEATEAFGSTTFQRLFKVQLP 206

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 207 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 248


>gi|312138775|ref|YP_004006111.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888114|emb|CBH47426.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +  + QD L       +++ RV++  ++  ++ + +G+  GF   +   I P  Q+L   
Sbjct: 75  SDGSLQDAL------AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTV 128

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL +         P ++L   +  G  + +  N+ AG  +      E A +  +
Sbjct: 129 PFLGLIPLFIIWFGIGE-QPKVFL---VALGVLFPLYLNLFAGIRSIDGKLIEAAETLGL 184

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             ++   +++LPG  P  +TG   + G AW A IV+E
Sbjct: 185 NKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAE 221



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 71/143 (49%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   V+ +L   +   LA  SR + + + P + +++++P LG +   +++F       
Sbjct: 89  RVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFG------ 142

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E   +F +    ++ +  +++  + +I   L E + +  L+ +Q   ++ +P ++P
Sbjct: 143 -IG-EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGALP 200

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
             +  + MS+   W  ++ +E I
Sbjct: 201 QALTGLRMSLGVAWLALIVAEQI 223


>gi|329296716|ref|ZP_08254052.1| glycine betaine transporter membrane protein [Plautia stali
           symbiont]
          Length = 211

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 26  ARSEHASRIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 80

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E S SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 81  TI---LGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 133

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 134 VVIASMIAVG-------GLGQMVLRGIGRLDM 158


>gi|297571432|ref|YP_003697206.1| binding-protein-dependent transporters inner membrane component
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931779|gb|ADH92587.1| binding-protein-dependent transport systems inner membrane
           component [Arcanobacterium haemolyticum DSM 20595]
          Length = 250

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 4/146 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   V+  + A++I IPVG  I      S+ ++PF     A PA  F PL+V  V  Y 
Sbjct: 60  TLHVAVIGSLTAALIGIPVGFGIAHFAPFSAALEPFLAASQAIPAVAFAPLLVLWVG-YG 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + L +LM+    + I+ N   G      D    A     +G R   YI  P   P 
Sbjct: 119 TTPIVLLCVLMVV---FPIIINTAVGVRDVDPDLIAAARLDGASGMRLMSYIEFPLALPG 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGH 531
            + G  T    +   ++V E+   G 
Sbjct: 176 ILAGIRTGFTLSVTGAVVGELVIGGQ 201


>gi|163853134|ref|YP_001641177.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664739|gb|ABY32106.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 283

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A SRR      PILD+MQ++P       + VY +   P   +GA ++A FA     V  +
Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVAPV 168

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                  + N+P +L E S +F  S  QK + + +P ++P    G+   MM+++S     
Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI  G       G+G  +  +I+  +  A   A + ++ V  + D++
Sbjct: 225 VVIAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269


>gi|254975947|ref|ZP_05272419.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
 gi|255093334|ref|ZP_05322812.1| ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255101513|ref|ZP_05330490.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
 gi|255307387|ref|ZP_05351558.1| ABC transporter, permease protein [Clostridium difficile ATCC
           43255]
 gi|255315080|ref|ZP_05356663.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
 gi|255517750|ref|ZP_05385426.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
 gi|255650863|ref|ZP_05397765.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
 gi|306520756|ref|ZP_07407103.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58]
          Length = 209

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L   + +LLF      +   S+    VL P++D ++ +PI+ ++  T+V+F    
Sbjct: 77  TLQRVLKGFMYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 133

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +   IF I  S V+ +  +  Q +  I +D    +RS   S    F  + VP 
Sbjct: 134 ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIVPA 188

Query: 188 SMPGLVWNMMMSMSGGWFFVV 208
           S+P ++    +++S GW  V+
Sbjct: 189 SLPDILTGSRIAISTGWMSVI 209


>gi|50120492|ref|YP_049659.1| putative sulfate ester transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611018|emb|CAG74463.1| putative sulfate ester transporter, permease component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 529

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SRR   +L P +  +  IP LG++   +V F     G   G +LA I       V   
Sbjct: 101 GASRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GIDDGLKLAVIIKAVIIPV--- 152

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T      + N+P  L+EV+R+ RL   Q+   L +P + P  +  + +++S  W  ++  
Sbjct: 153 TLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLTLPAAFPTWLTGLRLALSQAWVSLIVV 212

Query: 211 EMI 213
           E++
Sbjct: 213 ELL 215


>gi|152975750|ref|YP_001375267.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024502|gb|ABS22272.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 283

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 40/260 (15%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVIWLGCIT 386
            FL+L S   +    DIF           +A+QS+   G + NH +            I+
Sbjct: 50  GFLELVSKTVLPTPWDIF-----------LAFQSLVQTGELFNHLS------------IS 86

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +FR  V   I   + + +G  +GF       + P  Q+L   P     PL V    +   
Sbjct: 87  VFRAAVGFFIGGSLGVVLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGET 146

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      LL+  G  + +  N   G     +   +VA     +  +    +I+P   P  
Sbjct: 147 SK----VLLIADGAFFPLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNL 202

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I     
Sbjct: 203 LLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAF-- 254

Query: 567 LALNRFLWHPLYLYGTRCLR 586
             + +F    + L   RCL+
Sbjct: 255 --VGKFSDSLVRLLEVRCLK 272


>gi|293394761|ref|ZP_06639052.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291422712|gb|EFE95950.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 393

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+SR    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 208 ARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 262

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 263 TI---LGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 315

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340


>gi|170017667|ref|YP_001728586.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc citreum KM20]
 gi|169804524|gb|ACA83142.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc citreum KM20]
          Length = 568

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A VISL+       + AKS +   V+ PILD MQ++P   +L   V +F + + PG    
Sbjct: 102 ASVISLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
                +FA     +  M       +  +P  L E + SF  + WQK   L +P +    +
Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTIL 212

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G    +M+++S           +VV  ++I  PG+G  +  A++  ++
Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHANI 250


>gi|325676528|ref|ZP_08156206.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|325552706|gb|EGD22390.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +  + QD L       +++ RV++  ++  ++ + +G+  GF   +   I P  Q+L   
Sbjct: 75  SDGSLQDAL------AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTV 128

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL +         P ++L   +  G  + +  N+ AG  +      E A +  +
Sbjct: 129 PFLGLIPLFIIWFGIGE-QPKVFL---VALGVLFPLYLNLFAGIRSIDGKLIEAAETLGL 184

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             ++   +++LPG  P  +TG   + G AW A IV+E
Sbjct: 185 NKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAE 221



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 71/143 (49%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   V+ +L   +   LA  SR + + + P + +++++P LG +   +++F       
Sbjct: 89  RVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFG------ 142

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E   +F +    ++ +  +++  + +I   L E + +  L+ +Q   ++ +P ++P
Sbjct: 143 -IG-EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGALP 200

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
             +  + MS+   W  ++ +E I
Sbjct: 201 QALTGLRMSLGVAWLALIVAEQI 223


>gi|293606733|ref|ZP_06689086.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292814883|gb|EFF74011.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 12/199 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    +A+++ IP+G  IG    +     PF Q+L       + PL +     Y 
Sbjct: 92  SVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLAL-----YT 146

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +      ++ +IF  + W +L N   G  A   D+  VA +  ++  R    +ILP   P
Sbjct: 147 IKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVILPAAAP 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   + G AW   + +E+   G      TG+G ++       S   ++  +L +  
Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSIANIICAILFIGL 260

Query: 565 FVLALNRFLWHPLYLYGTR 583
             + L+  L     L   R
Sbjct: 261 IGMLLDTVLARAARLVSYR 279



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 84/191 (43%), Gaps = 14/191 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+   ++ L       L   S+ +     P + +++ I  L ++   +    +     
Sbjct: 95  RVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLALYTIKD----- 149

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A+ +AIF IF   +W M  +    +  + +D   V+R+  +S  +    + +P + P
Sbjct: 150 ---ADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVILPAAAP 206

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M +S+   W  +VA+EM++ G       GIG ++        +  I+ A+L +  
Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICAILFIGL 260

Query: 251 VIFLYDQLLFR 261
           +  L D +L R
Sbjct: 261 IGMLLDTVLAR 271


>gi|241896021|ref|ZP_04783317.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241870752|gb|EER74503.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 575

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 31/156 (19%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
           AK+  +  ++ PILD MQ++P   +L   V +F + + PG            +F S ++ 
Sbjct: 122 AKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFGIGVVPG------------VFASVIFA 169

Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMSG 202
           +  ++  S   +  +P DL E + SF  +G QK + + +P +      G+   +M+++S 
Sbjct: 170 LPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTLMLALS- 228

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                    M+V+  ++I  PG+G  +  A++  D+
Sbjct: 229 ---------MVVIA-SMIGAPGLGRGVLSAVQNADI 254


>gi|222081388|ref|YP_002540751.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221726067|gb|ACM29156.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 266

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R ++  +I  +   V+ T  A SR    +L P  + ++ I +L ++    V+F      
Sbjct: 74  MRNIAGFLIGCVIGIVFGTFLALSRIADRLLAPTFNGLKQISLLAWIPLISVWFGFGEQA 133

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K++   LA+   I          + Y  + + P DL EV R+ + +  Q+   + +P +M
Sbjct: 134 KIVFVALASFIPI--------ALNTYDGMRDAPEDLIEVGRALKFNARQRVLRIYLPSAM 185

Query: 190 PGLVWNMMMSMSGGWFFVVASE 211
           P     + + +   W   V +E
Sbjct: 186 PSTATGVHLGLIYAWLATVGAE 207


>gi|218531939|ref|YP_002422755.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524242|gb|ACK84827.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 283

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A SRR      PILD+MQ++P       + VY +   P   +GA ++A FA     V  +
Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVPPV 168

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                  + N+P +L E S +F  S  QK + + +P ++P    G+   MM+++S     
Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI  G       G+G  +  +I+  +  A   A + ++ V  + D++
Sbjct: 225 VVVAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269


>gi|89097937|ref|ZP_01170824.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911]
 gi|89087439|gb|EAR66553.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911]
          Length = 253

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 20/205 (9%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129
           R+L  + ISL+       L AKS+     L  ++  +QS+P + +L   +++F +N    
Sbjct: 61  RLLIGLGISLVLGSALGILLAKSKTADETLGTVILALQSVPSIVWLPLAIMWFGLN---- 116

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E++ IF +     + MT +M   + N+       +++   SG   F  +  P S+
Sbjct: 117 -----EVSVIFVVILGGTFVMTLNMRVGIKNVSPLFIRAAQTMGSSGIDLFTRVIFPASI 171

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +V    ++ +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ + 
Sbjct: 172 PYVVTGARLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIAVMIIIG 225

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLER 274
            +  + DQL+F+ +     K  LER
Sbjct: 226 VIGSIVDQLIFQRI----EKSVLER 246


>gi|260598591|ref|YP_003211162.1| putative osmoprotectant uptake system permease yehY [Cronobacter
           turicensis z3032]
 gi|260217768|emb|CBA32203.1| Putative osmoprotectant uptake system permease protein yehY
           [Cronobacter turicensis z3032]
          Length = 363

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 14/98 (14%)

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           G+++ P+  + Q+ P LG L    V    L P         A+ A+    +  +   +  
Sbjct: 207 GLLMAPLAGLAQAFPALGALG---VSGTGLAP---------ALIALTLYALLPLVRGVVA 254

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  +P  + E +R   +S WQ+FW++ VP ++P  VW
Sbjct: 255 GLGQVPDAVRESARGMGMSAWQRFWHVDVPLALP--VW 290


>gi|327394926|dbj|BAK12348.1| glycine betaine/L-proline transport system permease protein proW
           [Pantoea ananatis AJ13355]
          Length = 383

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 199 ARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 253

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E S SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 254 TI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 306

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 307 VVIASMIAVG-------GLGQMVLRGIGRLDM 331


>gi|300786191|ref|YP_003766482.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299795705|gb|ADJ46080.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 9/178 (5%)

Query: 403 PVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+G+ IG +RP ++  +QP  +L     A    P+    +    L+       L+++   
Sbjct: 104 PLGLLIGWYRP-VARFLQPLLELARNTAALALLPVFTLLLGIGELSK----VSLVVYACV 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +L N IAG +       + A S  ++  R +R +ILP   P   TG   A   +    
Sbjct: 159 WPVLLNTIAGVNTVDPLLVKAARSLGLSSPRLFRKVILPSAVPTVFTGIRMAASYSILVL 218

Query: 522 IVSEV--ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF-LWHP 576
           + +E+  A  G  +L  T    +  +    G     VLGVL+   FV    RF  W P
Sbjct: 219 VAAEMVGAKAGLGYLINTSQVNFQIQQMYAGILAVSVLGVLVNSGFVALERRFSTWRP 276


>gi|296157685|ref|ZP_06840519.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295891931|gb|EFG71715.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 33/177 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + I  N   G  + 
Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSV 168

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 169 DANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTR 583
            +G+G     + E      VV+G+L+         VLA  L R    WHP Y  G +
Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAK 279


>gi|291618547|ref|YP_003521289.1| ProW [Pantoea ananatis LMG 20103]
 gi|291153577|gb|ADD78161.1| ProW [Pantoea ananatis LMG 20103]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 204 ARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E S SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 259 TI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 311

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336


>gi|317133321|ref|YP_004092635.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315471300|gb|ADU27904.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 263

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y+VN F    +   I    I+ +R+ +  ++A II +P+GI  G      + IQPF++ L
Sbjct: 54  YLVNAFATGSIWGDI---GISSYRIFMGFLVAVIIGVPLGILAGTFHFAEALIQPFSEFL 110

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   F PL+   + +  +     ++++ + GT + ++  +     A P+D   + ++
Sbjct: 111 RYMPVPAFVPLI---MVWCGIGETAKIAVIFL-GTLFQLIPMMADNVRAVPDDL--LGAA 164

Query: 486 FHITGWRW--WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           + + G R    R +ILP I P  +       G AW    V+E+ +        +GLG  I
Sbjct: 165 YTLGGGRSLVLRRVILPAIAPSTMNTLRIMLGWAWTYLTVAELVA------ANSGLGYNI 218

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNR 571
            ++        +  G+LI+    L  +R
Sbjct: 219 LKAQRFLRTDAIFGGILIIGVLGLLCDR 246


>gi|222082372|ref|YP_002541737.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727051|gb|ACM30140.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 295

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 17/193 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT   +    ++S+        L A+S  +  ++ PILD+MQ++P   +L   V   M L
Sbjct: 102 RTVSMIFVCTILSIAIGIPIGILMARSNTVQRIINPILDVMQTMPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     I+AI    ++ ++   +      + +D+ E + +F  S  QK + + +
Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSNAQKLFKVQL 212

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q     ++  
Sbjct: 213 PLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGMFNG 265

Query: 246 LTMLGVIFLYDQL 258
           L ++G+  ++D++
Sbjct: 266 LAIVGIAVIFDRV 278


>gi|152985765|ref|YP_001348292.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960923|gb|ABR82948.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 254

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   W IL N  AG       + +++ S   T W   R +ILPGI  + +TG   A 
Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           G  W   +  E+         + GLG YI ++ ++ ++ E++
Sbjct: 189 GILWIVLVPCEMLGV------SAGLGYYILDTRDRLAYSELM 224


>gi|75674654|ref|YP_317075.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419524|gb|ABA03723.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 285

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV++ + +A +I +PVG+ +G    +++   P  Q L       + P+ V      
Sbjct: 94  VSLRRVLIGLALALLIGVPVGLAVGSYSRLNTATSPAFQFLRMISPLSWMPIAVMVFGVG 153

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P   +  ++ F   W I+ N   G       +  +A S   T W    Y+ILPG+  
Sbjct: 154 D-QP---IYFMLAFAAVWPIMLNTAEGVRRLQPSWLSLADSLAATRWETLCYVILPGVLG 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           + +TG   A G  W   +  E+         + GLG +I ++ ++ ++ E++  VL++
Sbjct: 210 HVLTGLRLAVGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMI 261


>gi|221197847|ref|ZP_03570893.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221204595|ref|ZP_03577612.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221213026|ref|ZP_03586002.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221167239|gb|EED99709.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221175452|gb|EEE07882.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221181779|gb|EEE14180.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 269

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +      E+
Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDASLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 165 AKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 269


>gi|254472399|ref|ZP_05085799.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062]
 gi|211958682|gb|EEA93882.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062]
          Length = 281

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           + T   +LS+  I +L        +A   +    + P+LD+MQ+IP   +L   ++ F +
Sbjct: 94  TETLALILSSTFICMLIGIPVGVYSAHHPKFFSWVRPVLDLMQTIPTFVYLIPALILFGL 153

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            + PG +     A   +I  +Q+          + + P+ L E   +F  + WQK + + 
Sbjct: 154 GVVPGLISTVVFALPASIRLTQI---------GVASTPKHLLEAGEAFGATYWQKLFKIE 204

Query: 185 VPFSMP----GLVWNMMMSMS 201
           +P+++P    GL   +M+S+S
Sbjct: 205 LPYALPNIMAGLTQTIMLSLS 225


>gi|325289658|ref|YP_004265839.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324965059|gb|ADY55838.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 271

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++   + LR+L    ++++   V       SR L  +    + +++ IP + ++   
Sbjct: 69  QLAKHVGISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPLA 128

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E + IF IF    + +  ++   +    + L EVS+    S W+ 
Sbjct: 129 IIWFGV--------EEESKIFLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRF 180

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQD 237
            + L +P ++P ++  + + +   W  VVA+E+I          GIG  I  A  + + D
Sbjct: 181 IFRLVIPGALPSIMTGLRIGIGSAWLCVVAAELIAADR------GIGYMIMDARQLLQTD 234

Query: 238 LLAILYAMLTMLGVIF--LYDQLLF 260
           L+ +    + ++G I   L  QL F
Sbjct: 235 LVIVGMITIGLIGKIMDTLLKQLEF 259



 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+    +A ++ I +G+ IG    ++       QLL   P   + PL    + ++
Sbjct: 76  ISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPL---AIIWF 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     +  L+  G  + IL NV  G         EV+     + WR+   +++PG  P
Sbjct: 133 GVEEESKI-FLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFRLVIPGALP 191

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 192 SIMTGLRIGIGSAWLCVVAAEL 213


>gi|306833542|ref|ZP_07466669.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424312|gb|EFM27451.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 305

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSIP 111
           P +    +LP      T+ +LSA++ + +       +   S + G  +L P ++++  IP
Sbjct: 71  PSSGSFGALPMILGSFTVTILSALIATPIAIGAAVFMTEVSPKYGAKILQPAIELLTGIP 130

Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
             + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF    SL  +PR  +E
Sbjct: 131 SVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYKE 189

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P
Sbjct: 190 ASLAMGATRWQTIWRVILNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVVP 243


>gi|295320585|gb|ADG00963.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           F str. 230613]
 gi|322807562|emb|CBZ05137.1| putative ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 180

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL +      
Sbjct: 47  ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P ++L   + F   + ++ N IAG      D+   A S     W  +  IILP   P
Sbjct: 107 D-GPTIFL---ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 162

Query: 505 YYVTGAITACGGAW 518
             +TGA  A  G W
Sbjct: 163 DILTGARIAISGGW 176



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +D ++ +PI+ ++  T+V+F        IG +   IF I  S ++ +  +    + NI +
Sbjct: 84  IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLITFSGIFPVILNTIAGVKNISK 135

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           D    +RS     W  F  + +P S+P ++    +++SGGW  V+
Sbjct: 136 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 180


>gi|226331044|ref|ZP_03806562.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198]
 gi|225201839|gb|EEG84193.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198]
          Length = 254

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 68  ANSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 122

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 123 TI---LGIKQVPEDLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 175

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 176 VVIASMIAVG-------GLGQMVLRGIGRLDM 200


>gi|91780304|ref|YP_555511.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692964|gb|ABE36161.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 272

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G  A P  + E+A  F  T W+ +R I+LP I P    G   A   +W A++ +E+
Sbjct: 154 NAAQGLEAVPRHYDELADVFRFTRWQRFRRIVLPAIVPSLFNGFYLALVTSWIATLGAEL 213

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +     G+G  + +  E     +V+LGV ++     A + F
Sbjct: 214 -----LMTSGVGIGTVLNDGRENFRMDQVLLGVAVVGLTGFAFHSF 254



 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 8/145 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  + I  L  F +A     +R +   + P    ++ + +  ++     +F     GK
Sbjct: 80  RDLLGLAIGSLCGFGFALFLKSARWIDAAIAPTFHAIRQVALFAWIPLLGTWFGLGEVGK 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+   LAA F ++         +  Q L  +PR  +E++  FR + WQ+F  + +P  +P
Sbjct: 140 VVFISLAAFFPVW--------LNAAQGLEAVPRHYDELADVFRFTRWQRFRRIVLPAIVP 191

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215
            L     +++   W   + +E+++ 
Sbjct: 192 SLFNGFYLALVTSWIATLGAELLMT 216


>gi|309389354|gb|ADO77234.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 279

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 16/153 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +++++ I+L+       + A ++ L ++  PILD MQ+IP   +L   +++F    
Sbjct: 100 TLASIMTSVFIALIVGIPVGIIKAHNKTLDLITRPILDFMQTIPPFVYLIPALMFF---G 156

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     +FAI  +    +T   Y  +  +  +L+E   +F    WQ  + + +P 
Sbjct: 157 LGNVSGVIATVVFAI--APPIRLT---YLGIQQVDEELKEAGHAFGAKWWQILFKIELPG 211

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           +MP    G+   +M+S+S     VV + MI VG
Sbjct: 212 AMPSIMMGINQCIMLSLS----MVVIAAMIGVG 240


>gi|316934163|ref|YP_004109145.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315601877|gb|ADU44412.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 295

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A++I IP+G+ IG  P + + + P   LL   P   + PL    + ++ L P   +  L
Sbjct: 112 LAALIGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 167

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + IL N + G  +      E A      G + +R ++LP   P    G      
Sbjct: 168 VFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCNGPQLFRSVVLPAALPSIFNGLRLGAS 227

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            AW   +V E+           GLGA I + 
Sbjct: 228 FAWILIVVGEMTG------VPEGLGAVIMDG 252


>gi|262275252|ref|ZP_06053062.1| putative sulfonate ABC transporter permease protein [Grimontia
           hollisae CIP 101886]
 gi|262220497|gb|EEY71812.1| putative sulfonate ABC transporter permease protein [Grimontia
           hollisae CIP 101886]
          Length = 247

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 16/194 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  + VIS++   V+  +  +   L  +  P+L +  +IP L       V  +  Y G 
Sbjct: 60  RVFLSFVISMVLGVVFGIMMGRFANLNELSDPLLILALNIPAL-------VTILLCYLG- 111

Query: 131 VIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            IG  E AA+ A+  +++  +   + +    +  DL +V++ FRLS  ++F+ + +P   
Sbjct: 112 -IGLVETAAVTAVALNKIPTVVAMIREGARVVDDDLMDVAKVFRLSPTKRFFNVFLPQLY 170

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++ +    +S  W  V+  E++   +      G+G  +    +  D+  IL      +
Sbjct: 171 PYIMASARTGLSLIWKIVLVVELLGRSN------GVGFKLHTLFQFFDIAGILAYTFAFV 224

Query: 250 GVIFLYDQLLFRPM 263
            VIFL + LLFRP+
Sbjct: 225 TVIFLLEALLFRPL 238


>gi|291303052|ref|YP_003514330.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290572272|gb|ADD45237.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 268

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 23/199 (11%)

Query: 360 AWQ-----SIGYIVNHFTYQDVLYVIWLGCITMFRVV-----VLII---IASIIWIPVGI 406
           AW+     S G ++  FT   V  V  LG   ++R V      L++    A +I IPVGI
Sbjct: 32  AWEIYARVSGGLLIPSFTETAVATVELLGTAELWRAVYVSNQALVLGFGAAVVIGIPVGI 91

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G    +   +  +  +L   P     PL+V  V +   +  + +++  I      ++ 
Sbjct: 92  LLGRFRLLERYLDVYLNILLITPMAAIIPLLVMSVGFGLASRVILVAVFAIV----MVVV 147

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G         E+A SF  +  + W  I+LPG  P  +TG     G A    ++ E 
Sbjct: 148 NARTGVRQVDPALIEMARSFGASERQIWTRILLPGALPAIMTGIRLGIGRAITGMVIVE- 206

Query: 527 ASWGHIHLRTTGLGAYIAE 545
                + + +T LG  I E
Sbjct: 207 -----LLMVSTALGGLILE 220


>gi|188533081|ref|YP_001906878.1| glycine betaine transporter membrane protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028123|emb|CAO95980.1| Glycine betaine/L-proline transport system permease protein
           [Erwinia tasmaniensis Et1/99]
          Length = 387

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 204 ARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 259 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336


>gi|90415462|ref|ZP_01223396.1| putative nitrate transporter [marine gamma proteobacterium
           HTCC2207]
 gi|90332785|gb|EAS47955.1| putative nitrate transporter [marine gamma proteobacterium
           HTCC2207]
          Length = 333

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 20/218 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQ 108
           DV   P     T    +   + +++F F+ AT        L   S      + PI+   +
Sbjct: 107 DVKVRPYTGKATYFDQIFTSLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFK 166

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV---WNMTFSMYQSLCNIPRDL 165
            +  L +L    +    LY       E A + + FT  +   W    +    + +I RDL
Sbjct: 167 PVSPLAWLPLVTMVVSALYVSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDL 226

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +VSR  RLS       + +P + P +   + +S++ GW  ++A+EM+         PG+
Sbjct: 227 IDVSRVLRLSSPVYIKTIVIPSATPLIFTGLRLSLATGWMVLIAAEMLAQN------PGL 280

Query: 226 GSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           G +I    +      L  I+ A++T+  + F+ DQL+ 
Sbjct: 281 GKFIWDEFQNGSSSSLGRIMVAVITIGIIGFILDQLML 318



 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V+   ++A+ I IP+GI  G   +    I P  Q         + PLV   VS  +
Sbjct: 126 SLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKPVSPLAWLPLVTMVVSALY 185

Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +       L     +     W  + N I G ++   D  +V+    ++   + + I+
Sbjct: 186 VSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLIDVSRVLRLSSPVYIKTIV 245

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P   TG   +    W   I +E+ +      +  GLG +I +  + GS     LG
Sbjct: 246 IPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSS--LG 297

Query: 559 VLIMCCFVLALNRFLWHPLYL 579
            +++    + +  F+   L L
Sbjct: 298 RIMVAVITIGIIGFILDQLML 318


>gi|254431616|ref|ZP_05045319.1| integral membrane components of other binding-protein-dependent
           transport system [Cyanobium sp. PCC 7001]
 gi|197626069|gb|EDY38628.1| integral membrane components of other binding-protein-dependent
           transport system [Cyanobium sp. PCC 7001]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 12/219 (5%)

Query: 346 IFWFCVV-CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIP 403
           +FW  V   G+   +   S   ++     Q    V+W   + ++ RV     +++ + +P
Sbjct: 44  VFWTAVTSAGLVDPLFLPSPSGVIAAGQSQAAQGVLWADLVASVGRVFAGFALSAAVALP 103

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI +G    I   ++P   L+   PA  F PL+   + Y+ L   L   LL+  GT ++
Sbjct: 104 LGIAMGTSTVICRLLEPLMALIRYMPAPAFIPLL---IIYFGLG-ELPKILLIFIGTLFF 159

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
               ++      PN+  E A +      +    +I P I P  +         AWN  IV
Sbjct: 160 NTLMIMDAVKFVPNELVETALTLGGRTSQVLLRVITPCITPQVIDTYRINMASAWNLVIV 219

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           +E+ +         GLG  I+ +       E+ LG++++
Sbjct: 220 AELVAANE------GLGKRISLAQRFLRTDEIFLGLIVI 252


>gi|58825941|gb|AAW82805.1| putative ABC MSA transporter membrane-associated permease component
           [Methylosulfonomonas methylovora]
          Length = 158

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 4/138 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+   +IA +I IP G+ +    +      P  ++L   P   + P   + + ++  N 
Sbjct: 9   RVMAGFLIAQLIGIPFGLALAVNRYFRDIFFPPFEILRPIPPLAWVP---AALIFWPTN- 64

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + +  +   G  + I+ NV+ GA      +   A S     W  +  IILPG  P   T
Sbjct: 65  EMSIIFVTFLGAFFTIVINVLGGARTIDVRYLRAAQSMGANQWHLFSRIILPGTLPSIFT 124

Query: 509 GAITACGGAWNASIVSEV 526
           GA    G  WN  + +E+
Sbjct: 125 GAAVGMGITWNVVLAAEM 142


>gi|13476968|ref|NP_108538.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027731|dbj|BAB54324.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 303

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 15/140 (10%)

Query: 103 ILDIMQSIPILG---FLTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQ 156
           I+ ++  IP+LG    +  T+V+ M L P  +   + +E A + A+       M   ++ 
Sbjct: 136 IIRMISWIPVLGRNGLINSTLVH-MGLVPKPIEWLLYSEFAVVLAMVHLYTLFMVTPIFN 194

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M    
Sbjct: 195 TLMRIDRSLVEAARDAGASGWQVLWNVIIPLAKPG--------MAIGTIFVVTLVMADFS 246

Query: 217 DTVIPLPGIGSYIALAIKEQ 236
              +   G  + +AL +K Q
Sbjct: 247 TVQVMSGGQSASVALMMKNQ 266


>gi|325290616|ref|YP_004266797.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966017|gb|ADY56796.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 259

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 24/203 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+  ++++ I IP+G+ +G    +   + P  +L+       + PL V       
Sbjct: 71  SLLRIVLAWVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAV------- 123

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  +       +++  + + IL N I+G         +   SF  +  R    I 
Sbjct: 124 ----LWFGIGLSGKVFVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRIC 179

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  VTG   + G AW A I +E+ +        +GLG  I +  E      V++G
Sbjct: 180 LPAAMPTIVTGLRISFGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMG 233

Query: 559 VLIMCCFVLALNRFLWHPLYLYG 581
           ++I+       +    H   L G
Sbjct: 234 MVIIGVVGFLFDAVFRHIEKLMG 256


>gi|251788501|ref|YP_003003222.1| glycine betaine transporter membrane protein [Dickeya zeae Ech1591]
 gi|247537122|gb|ACT05743.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 400

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 214 AHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 268

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 269 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 321

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346


>gi|94967858|ref|YP_589906.1| ABC aliphatic sulfonate transporter, inner membrane subunit
           [Candidatus Koribacter versatilis Ellin345]
 gi|94549908|gb|ABF39832.1| ABC aliphatic sulfonate transporter, inner membrane subunit
           [Candidatus Koribacter versatilis Ellin345]
          Length = 252

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 14/157 (8%)

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +QSIP + +L   +++F           E A +F +    +  +T S+   L +IP+   
Sbjct: 97  LQSIPSICWLPVAILWFGL--------TEKAILFVVVMGSLLAITISVESGLRSIPKIYS 148

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
              R+   +GW+   ++ +P S+P L+  +    +  W  +++ EMI V        G+G
Sbjct: 149 LAGRNLGANGWKLMVHVLLPASLPYLISGLKQGWAFAWRSLISGEMIFV------TLGLG 202

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             + +     D+  +   ML ++ + +L D L FR +
Sbjct: 203 QLLMMGRDLNDISQVFAVMLLIVALGWLVDTLFFRGL 239



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 381 WLG-CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W+G  ++M RV +   I+ ++ + +G  I +   +S         L + P+  + P+   
Sbjct: 52  WIGITVSMKRVAIGYAISCLLGVGLGFLITYSRFLSETAGRLIVSLQSIPSICWLPV--- 108

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + ++ L     L  +++ G+   I  +V +G  + P  +     +    GW+   +++L
Sbjct: 109 AILWFGLTEKAIL-FVVVMGSLLAITISVESGLRSIPKIYSLAGRNLGANGWKLMVHVLL 167

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEV 526
           P   PY ++G       AW + I  E+
Sbjct: 168 PASLPYLISGLKQGWAFAWRSLISGEM 194


>gi|154151551|ref|YP_001405169.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Methanoregula boonei 6A8]
 gi|154000103|gb|ABS56526.1| binding-protein-dependent transport systems inner membrane
           component [Methanoregula boonei 6A8]
          Length = 280

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 15/180 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            +++ RV+V   IA  + +P+G  +G  F+    + + P  Q+L        FP+ ++ +
Sbjct: 84  AVSLGRVLVGFFIALAVALPLGFLLGGWFK-SFETAVNPLLQVLGQANPFTLFPVFITLL 142

Query: 442 SYYHLNPNLWLSLLMIFGT-QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               L+      + +IF   QW +LFN ++G         ++A S  I  W+ +R ++LP
Sbjct: 143 GIGELS-----KISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLP 197

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P   TG   +   A+   I +E+         ++GLG  I ++      P++ +G++
Sbjct: 198 AAMPSVFTGIRMSAVFAFFMLIGAEMIG------ASSGLGYMILQAQATFQMPKMWVGIV 251



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            EL+ I  IF    W + F+    + N+   + +++RS  +  WQ F  + +P +MP + 
Sbjct: 145 GELSKISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLPAAMPSVF 204

Query: 194 WNMMMSMSGGWFFVVASEMI 213
             + MS    +F ++ +EMI
Sbjct: 205 TGIRMSAVFAFFMLIGAEMI 224


>gi|91783327|ref|YP_558533.1| ABC aliphatic sulfonates transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
 gi|91687281|gb|ABE30481.1| ABC aliphatic sulfonates transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 280

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 33/177 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + I  N   G  + 
Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSV 168

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 169 DANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTR 583
            +G+G     + E      VV+G+L+         VLA  L R    WHP Y  G +
Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAK 279


>gi|167462264|ref|ZP_02327353.1| putative ABC transporter, proline/glycine betaine permease protein
           [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322383435|ref|ZP_08057217.1| ABC transporter proline/glycine betaine permease-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152288|gb|EFX45112.1| ABC transporter proline/glycine betaine permease-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 575

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 27/177 (15%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126
           T  ++L++ VIS++       L A+   +  V+ P+LD MQ++P   +L   V +F + +
Sbjct: 92  TLSQVLTSAVISIVLGVPIGILCARRNGVQKVVTPLLDFMQTMPAFVYLLPAVSFFSLGV 151

Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            PG +     + +FAI  T ++ N+       +  +P DL E + +F  +  QK   L +
Sbjct: 152 VPGVIA----SVVFAIPPTIRLTNL------GIRQVPMDLVEAADAFGSTPMQKLVKLQL 201

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           P ++P    G+   +M+S+S           +VV  ++I   G+GS +  A+ +  +
Sbjct: 202 PLAVPSIMAGINQTIMLSLS-----------MVVISSMIGAQGLGSDVYRAVTQNKI 247


>gi|325291599|ref|YP_004277463.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325059452|gb|ADY63143.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 257

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++AS++ +PVGI +G    + + ++PF       PA+ F PL++      
Sbjct: 66  MTIWRVVGGFVLASLVAVPVGIAMGAYKPVEALLEPFVSFARYLPASAFVPLLILWAGIG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G  + I+  V    +    D  E A +         R +++P   
Sbjct: 126 EMQ-----KLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180

Query: 504 PYYVTGAITACGGAWNASIVSEV 526
           P          G AW   IV+E+
Sbjct: 181 PDIAEILRLVLGWAWTYVIVAEL 203


>gi|302390752|ref|YP_003826573.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302201380|gb|ADL08950.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%)

Query: 69  TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +LR++ + +  +++   V   L    R    V+  I+ IM  +P +  L   +++F    
Sbjct: 56  SLRIIGTGLSTAVVLAMVLTLLCMNGRLFPGVITDIMAIMHPLPGIAILPVAILWFG--- 112

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG + A +F I  S VW +T   Y    +IP++  E+ R+  LSG +    + +P 
Sbjct: 113 ----IGVK-AVLFVIVFSAVWPLTNHFYTGFRSIPKNQLEIGRNLGLSGIKLVLSVMLPA 167

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
           S P ++  +    +  W   VA+E++
Sbjct: 168 SFPHILGGLRSGWARAWQASVAAELV 193


>gi|218779229|ref|YP_002430547.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
 gi|218760613|gb|ACL03079.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
          Length = 276

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++  ++A +  +P+G+ +G+   ++  +    ++L   P   + PL+++ +  
Sbjct: 65  AISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPLILAWLGI 124

Query: 444 YHLNPNLW--------------LSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHI 488
             + P+++               +L++IF G  + IL N I G  + P ++ E A +   
Sbjct: 125 RGV-PDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGA 183

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            G      I++P   P  VTG     G  W   + +E+
Sbjct: 184 KGLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEM 221



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 41/81 (50%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G + + +  IF    + +  +  Q + +IPR+  E +R+    G      + +P S+P +
Sbjct: 142 GIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGAKGLPLLVKILIPASLPLI 201

Query: 193 VWNMMMSMSGGWFFVVASEMI 213
           V  + + +  GW  +VA+EM+
Sbjct: 202 VTGLRIGLGIGWMCLVAAEMM 222


>gi|330505559|ref|YP_004382428.1| ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328919845|gb|AEB60676.1| ABC transporter, permease protein [Pseudomonas mendocina NK-01]
          Length = 274

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 18/194 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           ++LR+L+   I      V  +L   SRRL   L P    ++++P L ++   +++     
Sbjct: 78  SSLRVLAGFAIGASLALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAWVPLLLIWLGIDE 137

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV    + + F ++         ++   + N+ R L EV     LS       + VP 
Sbjct: 138 SSKVTLIAIGSFFPVY--------LNLVAGIRNVDRKLVEVGELCNLSRLATIRRIFVPA 189

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245
           + P L   +   +S  W  VVA+E++   +      GIG  +     +   D + +  A 
Sbjct: 190 AQPYLFTGLRAGLSMAWLCVVAAELLAATE------GIGYLLTDGREVSRPDRVLVAIAT 243

Query: 246 LTMLGVIFLYDQLL 259
           L ++G   L D LL
Sbjct: 244 LAVMG--KLSDSLL 255


>gi|330820626|ref|YP_004349488.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327372621|gb|AEA63976.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 293

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    I  +  F   ++A  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYAIGAVLAFALTSVAV-STRIGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  SMY     +P  L    R++ L G +  W + VP ++P
Sbjct: 160 LL-------FVLVHSVLWPLALSMYTGFLGVPATLRMAGRNYGLRGLRFVWLILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|315302494|ref|ZP_07873338.1| glycine betaine transport system permease protein opuAB [Listeria
           ivanovii FSL F6-596]
 gi|313629138|gb|EFR97427.1| glycine betaine transport system permease protein opuAB [Listeria
           ivanovii FSL F6-596]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSNVVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|242238345|ref|YP_002986526.1| glycine betaine transporter membrane protein [Dickeya dadantii
           Ech703]
 gi|242130402|gb|ACS84704.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 392

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           + S+R   V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 208 SHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 262

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 263 TI---LGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTLMLALS----M 315

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340


>gi|150399264|ref|YP_001323031.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
 gi|150011967|gb|ABR54419.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
          Length = 253

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   IA+++ IP+GI +G+   ++  I    +LL   P   + PL    ++++
Sbjct: 59  ISIKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAWVPL---ALAWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  +  ++  G  + IL N I+G  + P    E A +   T     + +++P   P
Sbjct: 116 GIGES-SMHFIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGTTKHILKSVVIPASSP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 175 DILTGLRVGVGIAWMCVVAAEM 196


>gi|332522360|ref|ZP_08398612.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313624|gb|EGJ26609.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 575

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A +IS++         AKS  +  ++ PILD MQ++P   +L   V +F     G V
Sbjct: 101 VLVASLISIIIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157

Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
            G   + IFA+  T +  N+  S      NI  +L E S +F  +  QK   + +P +  
Sbjct: 158 PGVFASVIFALPPTVRFTNLGIS------NISTELVEASDAFGSTPRQKLLKVELPLAKN 211

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             M G+   MM+++S          M+V G ++I  PG+G  +  A++  D+
Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|270261219|ref|ZP_06189492.1| transporter [Serratia odorifera 4Rx13]
 gi|270044703|gb|EFA17794.1| transporter [Serratia odorifera 4Rx13]
          Length = 264

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 23/217 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      V   +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLTISSWRALIGFSIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI   L E++RS+ LSG++ F  
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLFTQ 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
               +LYA+L  L  +    QLL R  + W   ++L+
Sbjct: 225 VVAIVLYALLGKLADV--SAQLLERVWLRWHPAYQLK 259



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G     +   E+A S+ ++G+R +  ++LPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +++   +  L     
Sbjct: 190 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADVSA 242

Query: 572 -------FLWHPLY 578
                    WHP Y
Sbjct: 243 QLLERVWLRWHPAY 256


>gi|118589797|ref|ZP_01547202.1| glycine betaine/l-proline transport system permease protein prow
           [Stappia aggregata IAM 12614]
 gi|118437883|gb|EAV44519.1| glycine betaine/l-proline transport system permease protein prow
           [Stappia aggregata IAM 12614]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   ++++ ++ +        +AA   R+  VL P+LD+MQ++P   +L   ++ 
Sbjct: 91  EETTETLALVMASTIVCMAIGVPIGVVAAHHPRVYAVLRPVLDLMQTLPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     +    I  +Q+          + + P  L E  ++F  +  Q  W
Sbjct: 151 FGLGMVPGLIATVIFSIPAPIRLTQL---------GVSSTPTSLLEAGKAFGATNSQLLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KIELPYALPQIMAGLTQTIMLSLS 225


>gi|289434283|ref|YP_003464155.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170527|emb|CBH27067.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313633934|gb|EFS00646.1| glycine betaine transport system permease protein opuAB [Listeria
           seeligeri FSL N1-067]
          Length = 282

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALIIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|118582203|gb|ABL07480.1| limonene hydroxylase CD3-2 [Enterobacter cowanii]
          Length = 306

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 148 PLIALLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTAEGVMRI 199

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R  +LS +     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 200 PQDYLNVARVLKLSEFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGG 254



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+++ IPVG  IG    I+    P   LL       + P  +  
Sbjct: 109 WNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIALLRPVSPLAWLP--IGL 166

Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           + +    P    S   IF  + W ++ N   G    P D+  VA    ++ +   R I+ 
Sbjct: 167 LLFQRAEPA---STWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILF 223

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P+ +TG   + G AW   + +E+ + G       G+G +I       +   +++ +
Sbjct: 224 PAVLPHILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVQNIIIAI 277

Query: 560 LIMCCFVLALNRFL 573
           L++    +AL + L
Sbjct: 278 LLIGVVGMALEQGL 291


>gi|315641134|ref|ZP_07896213.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus italicus DSM 15952]
 gi|315483142|gb|EFU73659.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus italicus DSM 15952]
          Length = 579

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 25/149 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R   ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 120 AKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  IP++L E S SF  +G Q+ + L +P +    + G+    M+++S    
Sbjct: 177 L------GIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIK 234
                 M+V+  ++I  PG+G  +  A++
Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLSALQ 248


>gi|268323132|emb|CBH36720.1| putative ABC-type sulfonate/taurin/nitrate/bicarbonate transporter,
           permease protein [uncultured archaeon]
          Length = 257

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160
           PI++I++ IP L ++   +++         IG    AA F IF    + +    Y    +
Sbjct: 94  PIIEILRPIPPLAWIPVAILW---------IGLTHSAAGFIIFIGAFFPILIDSYTGFRD 144

Query: 161 IPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +P+ L E  +     G +K   Y+  P+++P +     + M  GW  VVA+EM  VG+
Sbjct: 145 VPKVLVETGKVLGCIGNRKLIRYVAFPYALPSIATGTRVGMGVGWMCVVAAEMFGVGN 202


>gi|167577393|ref|ZP_02370267.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 283

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IP G+ I     +   + P  +     P   + PL+V       
Sbjct: 93  SLARIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +  R+++LP   P
Sbjct: 153 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRLKLLRHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             +AL 
Sbjct: 262 IAIALE 267


>gi|126733424|ref|ZP_01749171.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2]
 gi|126716290|gb|EBA13154.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2]
          Length = 444

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 6/168 (3%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W  +G I     Y++      LG  ++FRV+V  ++ +++ IP+G  +G          P
Sbjct: 230 WSRLGEIAT-VGYRNSTLAEHLGY-SLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWFDP 287

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             + +   P     PLV+       +       +L+     W +     +G S       
Sbjct: 288 IVEFMRPVPPLALIPLVIIWAGIGEVGK----IILLFLAALWIMAIAARSGVSGVRISKV 343

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             A S   + W+  R++I+P   P   TGA  A G  W   + +E+ +
Sbjct: 344 HAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 391



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 17/171 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++         IG E+  I  +F + +W M  +    +  +
Sbjct: 287 PIVEFMRPVPPLALIPLVIIW-------AGIG-EVGKIILLFLAALWIMAIAARSGVSGV 338

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++        
Sbjct: 339 RISKVHAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 394

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
             G G  I +A K Q    +L  ++ +  + F  D L+ +    ++ W  K
Sbjct: 395 --GAGMMIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQAEKWLVPWKGK 443


>gi|333001231|gb|EGK20799.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri VA-6]
          Length = 215

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 15/148 (10%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++ 
Sbjct: 76  ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDALPSIMV 135

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248
            +  ++   W  ++ +E I          GIG Y+A+  +E    D++    ILYA+L  
Sbjct: 136 GVRFALGLMWLTLIVAETISANS------GIG-YLAMNAREFLQTDVVVVAIILYALLGK 188

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           L  +    QLL R  + W+  + L+  T
Sbjct: 189 LADV--SAQLLERLWLSWNPAYHLKEAT 214


>gi|311029848|ref|ZP_07707938.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus sp. m3-13]
          Length = 251

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+ V + +A II   +GIW+         +      L + P+ V+ PL    + ++  N 
Sbjct: 61  RLGVGLFLALIIGTLLGIWLAKSKTADETVGTLVLALQSVPSIVWLPL---AIIWFGFNE 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              + ++ + GT   +  N+  G  + P  + + AS+   +G   +  IILP   PY VT
Sbjct: 118 TAIIFIVTLGGTL-VMTINMRMGIKSVPPLYIKAASTMGASGVEMFWKIILPASVPYAVT 176

Query: 509 GAITACGGAWNASIVSEVASWG 530
           GA  A   AW A + +E+ S G
Sbjct: 177 GARLAWAFAWRALMAAELLSMG 198


>gi|152964408|ref|YP_001360192.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151358925|gb|ABS01928.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 239

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L       +   V   L   SR L  +L P L   +++P L ++    ++     P K
Sbjct: 53  RVLIGFACGAVAGLVLGGLTGASRLLHDLLAPTLGAFRAVPSLAWVPLLGLWIGIGEPPK 112

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   + A F ++T+        +  +L ++   L EV R++   G   F  + +P + P
Sbjct: 113 IVLVAIGAFFPVYTT--------VASALSHLDPALVEVGRAYGRRGIGLFTEVLLPATAP 164

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            L+  + + ++  W F+VA+E++
Sbjct: 165 ALLSGLRLGLAQSWLFLVAAELL 187


>gi|187923735|ref|YP_001895377.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714929|gb|ACD16153.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 280

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 33/178 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + I  N   G  + 
Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPIYVNTFHGIRSV 168

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 169 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
            +G+G     + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKS 280


>gi|121607756|ref|YP_995563.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552396|gb|ABM56545.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A+   + +G+ +G    + + + P   LL   P   + PL +           +WL L
Sbjct: 100 VVAATPGVLLGLAMGASRTVEALVNPVFLLLRPIPPLAWIPLAI-----------VWLGL 148

Query: 455 -----LMIFGTQWYI--LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                +M+     ++  + N  +G         E ++   ITGWR+WR +++PG  P   
Sbjct: 149 GDAAKVMVIFVAAFVPSVINSFSGVRQIDRPLLEASAMLRITGWRYWREVLIPGALPSIF 208

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           TG   +   +W   + +E+           GLG  + +  +    P +++G++
Sbjct: 209 TGLRLSLQASWTTLVAAELVG------AVAGLGQILNQGAQDIHPPMILVGMI 255



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR +  ++ P+  +++ IP L ++   +V+            + A +  IF +     
Sbjct: 114 GASRTVEALVNPVFLLLRPIPPLAWIPLAIVWLGL--------GDAAKVMVIFVAAFVPS 165

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + +  +  I R L E S   R++GW+ +  + +P ++P +   + +S+   W  +VA+
Sbjct: 166 VINSFSGVRQIDRPLLEASAMLRITGWRYWREVLIPGALPSIFTGLRLSLQASWTTLVAA 225

Query: 211 EMI 213
           E++
Sbjct: 226 ELV 228


>gi|116753834|ref|YP_842952.1| binding-protein-dependent transport systems inner membrane
           component [Methanosaeta thermophila PT]
 gi|116665285|gb|ABK14312.1| binding-protein-dependent transport systems inner membrane
           component [Methanosaeta thermophila PT]
          Length = 239

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR L  ++ PI+++++ IP L ++ F +V+F   +         +A F +F   V+ +  
Sbjct: 68  SRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHE--------SAGFIVFIGAVFPILI 119

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           + Y    N+PR   E +     +  +    Y+ +P+++P +   + ++M   W  +VA+E
Sbjct: 120 NTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIAWMCLVAAE 179

Query: 212 MIVVGDTVIPLPGIG----SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
           M  V  +     G+G    SY  L   E  LL ++     +LG++ L+    FR +I
Sbjct: 180 MFGVSTS-----GLGYRIWSYYYLHKMEHVLLYMI-----VLGMLGLFIDKAFRSII 226



 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II +P+G+ +G+   +   I P  +++   P   + P  +      H +       ++  
Sbjct: 56  IIAMPLGMGMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHESAG----FIVFI 111

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTGAITACGGA 517
           G  + IL N   G    P  + E A     T  R   RY+ LP   P    G   A G A
Sbjct: 112 GAVFPILINTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIA 171

Query: 518 WNASIVSEVASWGHIHLRTTGLG 540
           W   + +E+       + T+GLG
Sbjct: 172 WMCLVAAEM-----FGVSTSGLG 189


>gi|297567741|ref|YP_003686712.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
           protein [Meiothermus silvanus DSM 9946]
 gi|296852190|gb|ADH65204.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
           protein [Meiothermus silvanus DSM 9946]
          Length = 278

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  IF++      F M Q    +P++LEE  R   LS W  +WY+ +P S P LV   + 
Sbjct: 143 LLQIFSATGALAVFLMRQHFITLPKELEEAGRVDGLSHWGVYWYIMLPLSRPALVTVAIF 202

Query: 199 SMSGGW 204
           +M   W
Sbjct: 203 AMLNSW 208


>gi|320184675|gb|EFW59469.1| Taurine transport system permease protein TauC [Shigella flexneri
           CDC 796-83]
          Length = 218

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + PL+V       
Sbjct: 32  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGE 91

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 92  TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 147

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 148 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 184


>gi|297156427|gb|ADI06139.1| transport system integral membrane protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 317

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 14/213 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +IW    ++ R +   +IA  I  P+G+ +     I + I P    L + P+  + 
Sbjct: 109 ELLDIIW---TSVSRGLFGFLIALAIATPLGLIVARVKFIRAGIGPILSGLQSLPSVAWV 165

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P     V +  LN  +  +++++ G    I   +++G    P  F     +    G    
Sbjct: 166 P---PAVIWLGLNDKMMYTVILL-GAVPSIANGLVSGIDQVPPLFLRAGRTLGARGLVSA 221

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFP 553
           R+I+LP   P YV G       +W + + +E +A    + L   GLG Y+          
Sbjct: 222 RHILLPAALPGYVAGLKQGWAFSWRSLMAAEIIAKSPDLGL---GLGQYLENQRNNSDMA 278

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            V+LG++++    +A+   ++ P+     R LR
Sbjct: 279 GVLLGIIMILFVGIAIELLIFAPIE---RRVLR 308


>gi|227890328|ref|ZP_04008133.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849142|gb|EEJ59228.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 515

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L AMVI++   F+        ++     + I  I+Q+IP L  L   + +  +   P  
Sbjct: 31  LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA- 85

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VI   L AI  IF +         Y  L  IP +LEE + +  L+ W+K   L +P +MP
Sbjct: 86  VIALVLYAIMPIFQN--------TYSGLTEIPENLEEAATALGLTKWKKLQRLEIPLAMP 137

Query: 191 GLVWNMMMSM 200
            +V  + +++
Sbjct: 138 MIVAGIRIAL 147


>gi|325273145|ref|ZP_08139441.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
 gi|324101720|gb|EGB99270.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++  A V+ +        +AA        + P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVTFATVVCVAIGVPLGIVAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  +C++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|260575920|ref|ZP_05843915.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2]
 gi|259021846|gb|EEW25147.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2]
          Length = 312

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +         AA   RL   +VP+LD+MQ++P   +L   +V+
Sbjct: 126 EETTESLTLVLSACVVCMGLGVPIGIAAAHRPRLYAWMVPVLDLMQTLPTFVYLIPAIVF 185

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A +  +  + +  +T   +  +   P+ L E + +F  +  Q+ W
Sbjct: 186 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGISTTPQPLLEAATAFGATPRQRLW 236

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P++ P    GL   +M+S+S
Sbjct: 237 KVELPYAFPQIMAGLNQTIMLSLS 260


>gi|304405136|ref|ZP_07386796.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304346015|gb|EFM11849.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 306

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RR   +L P L +++ +P L      +++F           E++ +  I T   + +  +
Sbjct: 139 RRAEYLLDPSLQLLRLVPHLAIAPLIILWFGF--------GEVSKVVIIMTGAFFPLYIN 190

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  + N+   L EV+R  + S   +   L VP ++P L   + +S++  W  +V +E+I
Sbjct: 191 TFLGIRNVDARLFEVARVLQFSWRTRITKLIVPAALPELFIGLRLSLAVAWIGLVVAELI 250

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
             G T     G+G  I LA +E D   I   +L    V  L D   +LL R  + W + +
Sbjct: 251 --GAT----SGVGFLINLAKQESDTSTIFVGILIFAIVGKLIDSLVRLLERKWLFWRDSY 304

Query: 271 R 271
           +
Sbjct: 305 Q 305


>gi|209883285|ref|YP_002287142.1| putative aliphatic sulfonates transport permease protein SsuC
           [Oligotropha carboxidovorans OM5]
 gi|209871481|gb|ACI91277.1| putative aliphatic sulfonates transport permease protein SsuC
           [Oligotropha carboxidovorans OM5]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 15/205 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T+ R+ +   + +LF  V   +   S     +L P L  +++IP + ++   +++     
Sbjct: 83  TSWRVGAGFGLGVLFGTVLGAVCGYSALARRLLDPTLQALRAIPSIAWVPLFILWLGIFE 142

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV    +   F I+          +  ++  + R + EV R+FRLSG      + +P 
Sbjct: 143 MSKVALIAVGVFFPIY--------LGLMGAVLGVDRKIVEVGRTFRLSGPAMIRRILLPA 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA--ILYAM 245
            +P  V ++   +  GW FVVA+E++   + +  L   G  +    K  ++LA  I++A+
Sbjct: 195 VLPSYVVSLRSGLGLGWMFVVAAELMGASEGLGYLLIDGQQLG---KPAEILAAIIVFAL 251

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
           L       +  Q+ F P++ W + F
Sbjct: 252 LGKFTDWLI--QVGFAPLLRWQDAF 274


>gi|78356108|ref|YP_387557.1| phosphate ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218513|gb|ABB37862.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 298

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMV-ISL-LFTFVYATLAAKSRRLGMVLVPILDIMQSIP--I 112
           D   LP  A    +  LS+++ I L L T VY +  A S R+  V+ P+++++Q++P  +
Sbjct: 65  DFGILPMIAGSLAVTGLSSVIAIPLGLMTAVYLSEIA-SPRMRSVVKPLVEMLQALPSVV 123

Query: 113 LGFLTFTVVY-FMNLYPGKVIGAEL--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +GF    VV  F+    G   G  L  AAI   F + V  +T     ++ ++P +L E S
Sbjct: 124 IGFFGMVVVAPFLQQTFGLATGLNLTNAAIMLAFMA-VPTITSISEDAIYSVPNELREAS 182

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVI 220
            +   + WQ    + +P S+PG+   +++ MS      +   M+  G         D V 
Sbjct: 183 LALGATRWQTISRVVLPASLPGISTAVILGMSRSIGETMVVLMVAGGAAMIPGSLFDPVR 242

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           P+P   + IA  + E    +  Y  L   G++     L+F  +  W
Sbjct: 243 PMP---ASIAAEMAEAPFKSDHYHALFATGMVLFIFTLMFNILAAW 285


>gi|313638506|gb|EFS03676.1| glycine betaine transport system permease protein opuAB [Listeria
           seeligeri FSL S4-171]
          Length = 282

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALIIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|294627378|ref|ZP_06705963.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598333|gb|EFF42485.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 489

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 16/174 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+      
Sbjct: 374 HAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +G  +I   G G  I  +I+  DL  IL   +    V+ L  Q LF  +  W+ 
Sbjct: 428 LG-ALIGAGGYGQPILTSIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479


>gi|262198632|ref|YP_003269841.1| binding-protein-dependent transporters inner membrane component
           [Haliangium ochraceum DSM 14365]
 gi|262081979|gb|ACY17948.1| binding-protein-dependent transport systems inner membrane
           component [Haliangium ochraceum DSM 14365]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 18/150 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++++VI+LL +      A+KS     V+ P+LD MQ++P   +L   V++F     G+V
Sbjct: 94  VIASVVIALLISVPIGIWASKSDTAAHVVRPVLDFMQTLPAFVYLIPAVLFFQL---GEV 150

Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G     IFA+  + ++ N+       +  +P+D++E + SF  +  Q  +   +P +MP
Sbjct: 151 PGVIATLIFAMPPAVRLTNL------GIRQVPKDIKEAAVSFGSTPSQMLFKAELPVAMP 204

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVG 216
               G+   +M+++S     VV + MI  G
Sbjct: 205 TILAGVNQTIMLALS----MVVITGMIGAG 230



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           IAW+  G  +  FT   +L +  +G       T+  V+  ++IA +I +P+GIW      
Sbjct: 58  IAWRMSGIGMGIFTLLGMLLIDSMGLWAPTMDTLALVIASVVIALLISVPIGIWASKSDT 117

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +  ++P    +   PA V+    +  V ++ L     +   +IF     +    + G  
Sbjct: 118 AAHVVRPVLDFMQTLPAFVYL---IPAVLFFQLGEVPGVIATLIFAMPPAVRLTNL-GIR 173

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             P D KE A SF  T  +      LP   P  + G
Sbjct: 174 QVPKDIKEAAVSFGSTPSQMLFKAELPVAMPTILAG 209


>gi|222086307|ref|YP_002544840.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723755|gb|ACM26911.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 303

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 69  TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M++   +I+++       L A+S RL  ++ P LD+MQ++P   +L   V+ F    
Sbjct: 111 TLAMVTVCTLIAIVIGLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIF---G 167

Query: 128 PGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            GKV G     I+A+    ++ N+   +      + +++ E + +F  S  QK + + +P
Sbjct: 168 IGKVPGLIAVVIYAVPPIIRLTNLGIRL------VDKEVLEAADAFGSSHRQKLFNVQIP 221

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++P ++  +  ++      VV + M+ VG       G+G     AI  Q
Sbjct: 222 LALPTIMAGINQTIMMALAMVVVASMVGVG-------GLGKNTLQAINNQ 264


>gi|322368074|ref|ZP_08042643.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320552090|gb|EFW93735.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 280

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 16/221 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G + TT    ++ +V + +++       ++T+L ++  +VI          L   SRR+ 
Sbjct: 61  GAEFTTSAPFVLPVVGVPVELPRALTRLAQTSLHLVPGLVIGAFVGNAVGLLVGYSRRID 120

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             + P + +++ IP L ++ F +V+F   + G        A F +    +W   +  Y  
Sbjct: 121 ATVTPAIRVLRPIPELAWIAFAIVWFGIGHAG--------AAFIVAIGALWINYYGAYSG 172

Query: 158 LCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +  +    +EV+ S  + +      ++ +P + P +V     S+           MIVVG
Sbjct: 173 VHGVRDGYKEVATSLGVRTHLGMLRHVVLPAASPSMVNGFRTSIG-------RCLMIVVG 225

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             +   PG+G  I  A    D+   +  ML +  V    D 
Sbjct: 226 AELFGAPGVGYEIINASNNLDMARSMAYMLLISAVYICVDS 266



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   +V  ++I + +   VG+ +G+   I + + P  ++L   P   +    +      H
Sbjct: 91  TSLHLVPGLVIGAFVGNAVGLLVGYSRRIDATVTPAIRVLRPIPELAWIAFAIVWFGIGH 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504
                  + ++  G  W   +   +G     + +KEVA+S  + T     R+++LP   P
Sbjct: 151 AG----AAFIVAIGALWINYYGAYSGVHGVRDGYKEVATSLGVRTHLGMLRHVVLPAASP 206

Query: 505 YYVTGAITACG 515
             V G  T+ G
Sbjct: 207 SMVNGFRTSIG 217


>gi|238792918|ref|ZP_04636548.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC
           29909]
 gi|238727772|gb|EEQ19296.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC
           29909]
          Length = 280

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 119 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 170

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 171 RSVAQVRVRAARALGASHWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 225


>gi|90410103|ref|ZP_01218120.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
 gi|90329456|gb|EAS45713.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
          Length = 282

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
            T + +LSA + S++        AA    L  ++ PILD+MQ+IP   +L  T+V F + 
Sbjct: 95  ETFVLVLSATMFSVIVGVPIGIAAAHKPWLYTIMRPILDLMQTIPTFVYLIPTLVLFGLG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG +       IFAI  +    +T   Y  +  +P +L E  R+F  S  +  + + +
Sbjct: 155 VVPGLIS----TIIFAI--AAPIRLT---YLGISRVPEELVEAGRAFGASRMKLLFKVEL 205

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++     A 
Sbjct: 206 PAAMPNI-------MAGITQCIMLSLSMVVISALVGADGLGKPVVRALNTVNISQGFEAG 258

Query: 246 LTMLGVIFLYDQLLFRP 262
           L ++ V  + D+L   P
Sbjct: 259 LAIVLVAIILDRLCKTP 275


>gi|311112824|ref|YP_003984046.1| nitrate/sulfonate/bicarbonate ABC transporter membrane protein
           [Rothia dentocariosa ATCC 17931]
 gi|310944318|gb|ADP40612.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Rothia dentocariosa ATCC
           17931]
          Length = 317

 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L   +I  +   V   L   S    +V  P +  ++++P L ++   +++     
Sbjct: 126 STQRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLLWVGIGE 185

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV    + A F ++T+        +  +L ++   L E +R+F L G + F  + +P 
Sbjct: 186 NSKVTLVAIGAFFPVYTT--------VSAALAHVDVKLVEAARAFGLKGIRLFTTVQLPA 237

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
            +P +V  + ++++  W F+VA+E++
Sbjct: 238 VLPSVVSGLRLALAQAWLFLVAAELL 263


>gi|290476212|ref|YP_003469112.1| glycine/betaine/proline ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289175545|emb|CBJ82348.1| glycine/betaine/proline transport protein (ABC superfamily,
           membrane) [Xenorhabdus bovienii SS-2004]
          Length = 364

 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 17/165 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A + R+  ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 166 AHNERVARIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVMVTIIFAL--PPIVRL 220

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T      +  +P DL E ++SF  S  Q  + + +P +MP ++  +  ++      VV +
Sbjct: 221 TI---LGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIA 277

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253
            MI VG       G+G  +   I   D  L A+  A + +L +I 
Sbjct: 278 SMIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIIL 315


>gi|170758692|ref|YP_001788569.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405681|gb|ACA54092.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 180

 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL +      
Sbjct: 47  ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P ++L   + F   + ++ N IAG      D+   A S     W  +  IILP   P
Sbjct: 107 D-GPTIFL---IAFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 162

Query: 505 YYVTGAITACGGAW 518
             +TGA  A  G W
Sbjct: 163 DILTGARIAISGGW 176



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +D ++ +PI+ ++  T+V+F        IG +   IF I  S ++ +  +    + NI +
Sbjct: 84  IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLIAFSGIFPVILNTIAGVKNISK 135

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           D    +RS     W  F  + +P S+P ++    +++SGGW  V+
Sbjct: 136 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 180


>gi|325284546|ref|YP_004257085.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
 gi|324316720|gb|ADY27831.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
          Length = 264

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V + +A +I  P+G+ +G    +    +P  QLL       + PL V  +   
Sbjct: 75  VSLKRVMVGLGLAFVIGAPLGLLVGSSRLLERATEPAFQLLRMISPLSWMPLAVMVLGVG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + LL+     W ILF    G       + ++  S   T    + +I LPGI  
Sbjct: 135 DAP----IYLLLALAGLWPILFAAAGGVKNLNASWLDLGRSLSATRGEMFWHITLPGILG 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             + G   A G  W   +  E+     + +R  GLG +I ++ ++ ++PE++  V+++
Sbjct: 191 SLLQGVRLAIGTLWILLVPCEM-----LGVR-AGLGYFILDTRDRLAYPELMATVVLI 242


>gi|170693842|ref|ZP_02884999.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141260|gb|EDT09431.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 287

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 19/208 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R     +I   + + +G+ +GF P   + +    Q++ A P     PLV+      
Sbjct: 89  VSLLRAAGGFVIGGTLGLALGVIVGFSPLAQALLDRSVQMVRAVPFLAMLPLVIVWFGVG 148

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++L ++F     I  N + G         E+     +      R IILPG  P
Sbjct: 149 EVAKIFLVALAVLF----PIYINTMLGIRQIDPKLMELGRVVGLERAAIVRRIILPGAMP 204

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557
             +TG   A   AW A +++E  +       T G+G    ++ E  +   ++L       
Sbjct: 205 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLNTNVIILTMIIYAI 258

Query: 558 -GVLIMCCFVLALNRFL-WHPLYLYGTR 583
            GV+      L   RFL WH  Y  G R
Sbjct: 259 IGVVADALVRLLEGRFLSWHANYTKGAR 286


>gi|281355624|ref|ZP_06242118.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281318504|gb|EFB02524.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 352

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 10/172 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI  G  P      +P  + +  FPA VF  L V+ +      P + + ++  F  Q
Sbjct: 144 VPLGILCGAFPFFERLFEPVVEFIRYFPAPVFATLAVAILGIND-APKVAIIVIGTFFQQ 202

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N    A        E A +      R    +++P + P          G AW   
Sbjct: 203 LPMIANTTRQADP---ALIEAAQTLGAGRKRILMRVVIPSVLPKLYKDMRILLGWAWTYL 259

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           IV+EV         TTG+  +I +  +  +F  V   ++I+ C  LA + FL
Sbjct: 260 IVAEVVG------TTTGISWFITQQAKYRNFANVYAAIVIIGCIGLACDMFL 305


>gi|116051468|ref|YP_789699.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388035|ref|ZP_06877510.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313108805|ref|ZP_07794791.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|115586689|gb|ABJ12704.1| putative aliphatic sulfonates ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310881293|gb|EFQ39887.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 274

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     I S + + VG W+G      + ++P  Q L A P+  + PL++       
Sbjct: 77  SLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   +L+  G  + +   ++AG       + E+   + ++ +   R I+LP   P 
Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +W   + +E+ +       T GLG  +++  E  S P++V+  +++   
Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
           +  L+  L   L     R LR
Sbjct: 246 LGKLSDGLLRSLE---RRALR 263



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 17/206 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   I         T    SRR    L P    +++IP L ++   +++F      K
Sbjct: 80  RVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   L A F ++         ++   +  + R   E+ R +RLS +     + +P ++P
Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   +  ++S  W F+VA+E+I          G+G  ++   +      ++ A+L +  
Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245

Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273
           +  L D LL    R  + W + F  E
Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271


>gi|313836838|gb|EFS74552.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314929750|gb|EFS93581.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314972183|gb|EFT16280.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328907608|gb|EGG27372.1| glycine betaine transport system permease protein
           [Propionibacterium sp. P08]
          Length = 288

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113
           V ++ Q+    T++ L+ +V++++   + A      AAKS+R   ++ PILD MQ++P L
Sbjct: 84  VRAMDQW--NNTMQTLALVVVAVILALIVAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +V F     G+V GA    IFA+       + F+    +  +  +  E   +F 
Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDAETVEAGAAFG 193

Query: 174 LSGWQKFWYLGVPFSMP 190
            S     W + +P +MP
Sbjct: 194 ASPRHILWRIQMPLAMP 210


>gi|310822864|ref|YP_003955222.1| phosphate ABC transporter permease pstc [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395936|gb|ADO73395.1| Phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 42/210 (20%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFL-----------TFTVVYFMNLYPGKVIGAELAAIF 140
           RRL   L PI++++  IP  +LGF            TF   Y +N      +G  LA + 
Sbjct: 140 RRLREFLKPIIELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAG-LGLALAIVP 198

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV------- 193
            IFT            +L  +PR   E S +   + W+  W + +P + PG++       
Sbjct: 199 VIFTVA--------EDALTAVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGF 250

Query: 194 -----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                  M++ M+ G   +V+S +   GD+V  L    + IA  + E  + +  Y++L  
Sbjct: 251 GRAIGETMIILMASGNAAIVSSSL---GDSVRSL---SATIAAEMGEVVVGSPHYSLLFF 304

Query: 249 LGV-IFLYDQLLFRPMIVWSNKFRLERTTG 277
           +GV +F++  +L     VW+ K  L+R TG
Sbjct: 305 IGVELFVFTFVLNMVASVWTKKV-LKRLTG 333


>gi|240140554|ref|YP_002965034.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens AM1]
 gi|254563044|ref|YP_003070139.1| glycine/betaine/proline ABC transporter membrane protein
           [Methylobacterium extorquens DM4]
 gi|240010531|gb|ACS41757.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens AM1]
 gi|254270322|emb|CAX26318.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens DM4]
          Length = 283

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A SRR      PILD+MQ++P       + VY +   P   +GA ++A FA     V  +
Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVPPV 168

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                  + N+P +L E S +F  S  QK + + +P ++P    G+   MM+++S     
Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI  G       G+G  +  +I+  +  A   A + ++ V  + D++
Sbjct: 225 VVIAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269


>gi|157146368|ref|YP_001453687.1| alkanesulfonate transporter permease subunit [Citrobacter koseri
           ATCC BAA-895]
 gi|157083573|gb|ABV13251.1| hypothetical protein CKO_02127 [Citrobacter koseri ATCC BAA-895]
          Length = 263

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 VQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGFPLFVHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANA 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    QLL R  + W+  +  +  T
Sbjct: 207 GIG-YLAMNAREFLQTDIVVVAIILYALLGKLADV--SAQLLERVWLRWNPAYYTKEAT 262


>gi|299533368|ref|ZP_07046750.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni S44]
 gi|298718574|gb|EFI59549.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni S44]
          Length = 257

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   I+ASI+ +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 66  MTVWRVMGGFILASIVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 125

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I   V         D  E A +   +     + +++PG  
Sbjct: 126 EAQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 181 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 217


>gi|16803055|ref|NP_464540.1| hypothetical protein lmo1015 [Listeria monocytogenes EGD-e]
 gi|47093961|ref|ZP_00231696.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|47096347|ref|ZP_00233943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|217964885|ref|YP_002350563.1| glycine betaine transport system permease opuAB [Listeria
           monocytogenes HCC23]
 gi|224500739|ref|ZP_03669088.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes Finland 1988]
 gi|224502670|ref|ZP_03670977.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes FSL R2-561]
 gi|226223633|ref|YP_002757740.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|254827960|ref|ZP_05232647.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|254832238|ref|ZP_05236893.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           10403S]
 gi|254898811|ref|ZP_05258735.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           J0161]
 gi|254911700|ref|ZP_05261712.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|254936026|ref|ZP_05267723.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           F6900]
 gi|254992281|ref|ZP_05274471.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           FSL J2-064]
 gi|284801347|ref|YP_003413212.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578]
 gi|284994489|ref|YP_003416257.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923]
 gi|290893835|ref|ZP_06556814.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|4760364|gb|AAD29105.1|AF039835_2 putative glycine betaine membrane transport protein GbuB [Listeria
           monocytogenes]
 gi|16410417|emb|CAC99093.1| gbuB [Listeria monocytogenes EGD-e]
 gi|47015305|gb|EAL06242.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|47017660|gb|EAL08458.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217334155|gb|ACK39949.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes HCC23]
 gi|225876095|emb|CAS04801.1| Putative glycine betaine ABC transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258600342|gb|EEW13667.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|258608614|gb|EEW21222.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           F6900]
 gi|284056909|gb|ADB67850.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578]
 gi|284059956|gb|ADB70895.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923]
 gi|290556662|gb|EFD90197.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293589649|gb|EFF97983.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|307570556|emb|CAR83735.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes L99]
 gi|313609549|gb|EFR85092.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes FSL F2-208]
 gi|328466908|gb|EGF38017.1| hypothetical protein LM1816_14577 [Listeria monocytogenes 1816]
          Length = 282

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|333023182|ref|ZP_08451246.1| putative nitrate ABC transporter, permease [Streptomyces sp.
           Tu6071]
 gi|332743034|gb|EGJ73475.1| putative nitrate ABC transporter, permease [Streptomyces sp.
           Tu6071]
          Length = 235

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 81/189 (42%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL +  +    
Sbjct: 44  SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 103

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P +++  L  F  T    L  V A      N  + + +   +     +  +++P   P
Sbjct: 104 -TPKVFVIFLASFLATVVAALEGVTATDRTLINAARVLGAPDRVI----FLKVVIPASTP 158

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + + GA    G +W   + +E+ +         GLG  +  +      P + +G+L +  
Sbjct: 159 FLLVGARIGLGSSWATLVAAELIA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGV 212

Query: 565 FVLALNRFL 573
             L ++R L
Sbjct: 213 VGLVMDRLL 221


>gi|319796476|ref|YP_004158116.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315598939|gb|ADU40005.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 293

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 14/131 (10%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +  ++ +++   +  + W+ +RY++ P   PY++ G   A G +   ++V
Sbjct: 166 ILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 225

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573
           +E  +      + TGL + I ES+ +   P +        +LG++I   F  AL+R +  
Sbjct: 226 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFIVFA-ALSRMVLG 282

Query: 574 -WHPLYLYGTR 583
            WH   +   R
Sbjct: 283 HWHESEMRRER 293


>gi|294667621|ref|ZP_06732835.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602616|gb|EFF46053.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 489

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+      
Sbjct: 374 HAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +G  +I   G G  I   I+  DL  IL   +    V+ L  Q LF  +  W+ 
Sbjct: 428 LG-ALIGAGGYGQPILTGIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479


>gi|59711393|ref|YP_204169.1| glycine betaine transporter subunit [Vibrio fischeri ES114]
 gi|59479494|gb|AAW85281.1| glycine betaine transporter subunit [Vibrio fischeri ES114]
          Length = 360

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+SR     + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 165 ARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P DL E   SF  +  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 220 TILGIQ---QVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|296876746|ref|ZP_06900794.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296432248|gb|EFH18047.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 303

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L P ++++  IP  + GF+   VV  +  +L+ G   G  L+ +F +F   +  +TF   
Sbjct: 116 LQPAIELLVGIPSVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTT 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +PR   E S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V 
Sbjct: 175 DSLRAVPRHYREASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVG 234

Query: 216 GDTVIP 221
              V+P
Sbjct: 235 NSAVVP 240


>gi|46580703|ref|YP_011511.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120602005|ref|YP_966405.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris
           DP4]
 gi|46450122|gb|AAS96771.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562234|gb|ABM27978.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris DP4]
 gi|311234422|gb|ADP87276.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris RCH1]
          Length = 283

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 21/164 (12%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY--- 155
           VL+P+LD+MQ++P   +L   + +F            L  + A+F + V+ M  ++    
Sbjct: 127 VLMPVLDLMQTMPAFVYLIPAIPFF-----------GLGKVAAVFATVVFAMPPAIRFTC 175

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +P DL E + +F  S WQ+   L +P + P ++  +  ++      ++A  M+V+
Sbjct: 176 LGIRQVPDDLVECAEAFGTSRWQRLVKLELPLAAPTILAGVNQTI------MLALSMVVI 229

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              +I   G+G  +  AI+  +L +   A + ++ V    D++L
Sbjct: 230 A-AMIGARGLGGEVWKAIQRLELGSGFEAGIGIVIVAICLDRVL 272


>gi|171316855|ref|ZP_02906065.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MEX-5]
 gi|171098025|gb|EDT42842.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MEX-5]
          Length = 298

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGVWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|161524842|ref|YP_001579854.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189350408|ref|YP_001946036.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160342271|gb|ABX15357.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189334430|dbj|BAG43500.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 273

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +      E+
Sbjct: 113 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDASLIEM 168

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 169 AKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 222

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 223 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 273


>gi|91772543|ref|YP_565235.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Methanococcoides burtonii DSM 6242]
 gi|91711558|gb|ABE51485.1| Glycine betaine ABC transporter permease protein [Methanococcoides
           burtonii DSM 6242]
          Length = 276

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
            T   ++++  ++LL       ++AK+     ++ P+LD+MQ++P   +L   V++F + 
Sbjct: 93  ETISLVITSASLALLIAIPLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGLG 152

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG V     A I       +   T  + Q    +P++L EV+ +F  + WQK   + +
Sbjct: 153 NVPGLV-----ATIVFAMPPAIRLTTLGIQQ----VPKELTEVADAFGSTPWQKLTKVEL 203

Query: 186 PFSMP----GLVWNMMMSMS 201
           P ++P    G+   +M+S+S
Sbjct: 204 PTALPSIMAGVNQCIMLSLS 223


>gi|318058231|ref|ZP_07976954.1| binding-protein-dependent transporter inner membrane component
           [Streptomyces sp. SA3_actG]
          Length = 271

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL +  +    
Sbjct: 80  SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 139

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             P +++  L  F      L  V+A   G +A      + A          +  +++P  
Sbjct: 140 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 192

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ + GA    G +W   + +E+ +         GLG  +  +      P + +G+L +
Sbjct: 193 TPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFVGLLTI 246

Query: 563 CCFVLALNRFL 573
               L ++R L
Sbjct: 247 GVVGLVMDRLL 257


>gi|312116288|ref|YP_004013884.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221417|gb|ADP72785.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 289

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 19/214 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW  +  IVN     DV    W    ++ R     ++A ++ +P+G+ +G          
Sbjct: 76  AW--VDLIVNGSLLSDV----W---ASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTD 126

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            F Q L   P     PL V  +     +       +  + + W +L N I+G  +     
Sbjct: 127 LFVQTLRNTPQYALLPLFVLTMGIGEASK----IAITFYASMWMLLINTISGVKSVDPTL 182

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A S     +  +R ++LP   P    GA  A      AS+VS + +   +    +G+
Sbjct: 183 IKAARSMGANDFDLFRNVVLPASVPSITAGARLAV----KASVVSVIGA--EMLAAQSGV 236

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I  +      PE+  G+L +      +N  L
Sbjct: 237 GHLIQNAQLMMQVPEMYAGILTLTVIGTTINYLL 270


>gi|28377606|ref|NP_784498.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254555784|ref|YP_003062201.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|308179759|ref|YP_003923887.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270439|emb|CAD63341.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254044711|gb|ACT61504.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|308045250|gb|ADN97793.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 309

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 8/170 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVIS--LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--IL 113
           V +LP       + +LSA++ +   + T V+ T     RR   +L P+ +++  IP  + 
Sbjct: 80  VGALPMIVGSFLITILSALIATPFAIGTAVFMT-EISPRRGAKILRPVTELLVGIPSVVY 138

Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+   VV  +  N + G   G  L+  F +F   +  +T     +L ++PR   E S +
Sbjct: 139 GFIGLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPTVTSMTADALNSVPRYYREASLA 197

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  + + +  ++PG++  ++  M+  +   +A +M++   T++P
Sbjct: 198 LGATRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLP 247


>gi|312867635|ref|ZP_07727841.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parasanguinis F0405]
 gi|322389237|ref|ZP_08062798.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC 903]
 gi|311096698|gb|EFQ54936.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parasanguinis F0405]
 gi|321144142|gb|EFX39559.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC 903]
          Length = 303

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L P ++++  IP  + GF+   VV  +  +L+ G   G  L+ +F +F   +  +TF   
Sbjct: 116 LQPAIELLVGIPSVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTT 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +PR   E S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V 
Sbjct: 175 DSLRAVPRHYREASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVG 234

Query: 216 GDTVIP 221
              V+P
Sbjct: 235 NSAVVP 240


>gi|283853315|ref|ZP_06370564.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
 gi|283571296|gb|EFC19307.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
          Length = 251

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V   +A ++  PVG+ +G  P +     P    +   P   + PL +      
Sbjct: 60  MSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPLAI------ 113

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL L       L+  G  + ++    +G  A    + E            WR +
Sbjct: 114 -----LWLGLGLASAAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLAVWRKV 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +LPG  P  +TG     G  W   + +E A 
Sbjct: 169 LLPGCLPAALTGVRVGLGIGWMTLVAAEFAG 199


>gi|85059883|ref|YP_455585.1| glycine betaine transporter membrane protein [Sodalis glossinidius
           str. 'morsitans']
 gi|84780403|dbj|BAE75180.1| glycine betaine/L-proline ABC transporter permease component
           [Sodalis glossinidius str. 'morsitans']
          Length = 349

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 164 ARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 218

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P ++P    G+   +M+++S     
Sbjct: 219 TI---LGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTLMLALS----M 271

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 272 VVIASMIAVG-------GLGQMVLRGIGRLDM 296


>gi|315222700|ref|ZP_07864589.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           anginosus F0211]
 gi|319938947|ref|ZP_08013311.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|315188386|gb|EFU22112.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           anginosus F0211]
 gi|319811997|gb|EFW08263.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 303

 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   +  +TF  
Sbjct: 115 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMT 173

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V
Sbjct: 174 TDSLRAVPRHYREASMAMGATRWQTIWRVTLKAARSGIFTAIVFGMARAFGEALAIQMVV 233

Query: 215 VGDTVIP 221
               VIP
Sbjct: 234 GNSAVIP 240


>gi|330810502|ref|YP_004354964.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378610|gb|AEA69960.1| Glycine betaine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 17/203 (8%)

Query: 57  DVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           DV  L P+  S   L +L+A V++L+       LA  +  +  ++ P+LD++Q++P   +
Sbjct: 83  DVMGLWPETVSTLAL-VLTATVLALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIY 141

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L    +  +   P         A+ A F   V          +   PR+  E+  +  ++
Sbjct: 142 L-LPAIALLGYGPAT-------ALLATFIVAVPPAIRLTSLGIRMTPREFIELGEASGVT 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           GWQ F  + +PF+ P ++  +  S+   +  VV + ++  G       G+G  I  AI+ 
Sbjct: 194 GWQMFLKIRLPFAKPSIMAGVNQSLMMAFGMVVIAGIVGSG-------GLGESIYGAIRT 246

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+   + A + ++ +  + D+L
Sbjct: 247 LDIAKSINAAMAIVILTMILDRL 269



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++A ++ IP+G+  G  P +   + P   L+   P  ++    ++ + Y  
Sbjct: 94  TLALVLTATVLALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIYLLPAIALLGY-- 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P   L    I      I    + G    P +F E+  +  +TGW+ +  I LP   P 
Sbjct: 152 -GPATALLATFIVAVPPAIRLTSL-GIRMTPREFIELGEASGVTGWQMFLKIRLPFAKPS 209

Query: 506 YVTG 509
            + G
Sbjct: 210 IMAG 213


>gi|315281743|ref|ZP_07870304.1| glycine betaine transport system permease protein opuAB [Listeria
           marthii FSL S4-120]
 gi|313614611|gb|EFR88194.1| glycine betaine transport system permease protein opuAB [Listeria
           marthii FSL S4-120]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|261821115|ref|YP_003259221.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605128|gb|ACX87614.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 533

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 17/162 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWN 149
             SRR   +L P + ++  IP LG++   +V F         G + A   A I  + +  
Sbjct: 105 GASRRAEHLLHPTVYMLAQIPTLGWIPLFMVLF---------GIDDALKLAVIIKAVIIP 155

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T      + N+P  L+EV+R+ RL   Q+   L +P + P  +  + +S+S  W  ++ 
Sbjct: 156 VTLHTQTGVRNVPPALQEVARTLRLPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIV 215

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            E++          GIG Y+ +  ++   L I++  +T++G+
Sbjct: 216 VELLASSQ------GIG-YLLVWGRQLFQLDIVFVCITIIGL 250


>gi|257056604|ref|YP_003134436.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256586476|gb|ACU97609.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 310

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 18/141 (12%)

Query: 70  LRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           L+ LS +V++ L   V       LAAKS + G+V+ P+LD MQ++P+  +L   V +F +
Sbjct: 92  LQTLSVVVLAALIAIVVGVPVGVLAAKSPKTGLVVRPVLDFMQTLPVFVYLVPAVFFFGI 151

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            + PG V     A   A+  +++          +  + R+  E +R+F     Q    + 
Sbjct: 152 GVVPGIVSTTVFAVPPAVRLTEL---------GIRQVDRETVEAARAFGARPRQVLREVE 202

Query: 185 VPFSMP----GLVWNMMMSMS 201
           +P ++P    G+   +M+++S
Sbjct: 203 LPLAVPSIMAGVNQVIMLALS 223


>gi|82542857|ref|YP_406804.1| taurine transporter subunit [Shigella boydii Sb227]
 gi|81244268|gb|ABB64976.1| taurine transport system permease protein [Shigella boydii Sb227]
 gi|332098453|gb|EGJ03419.1| taurine transport system permease protein tauC [Shigella boydii
           3594-74]
          Length = 269

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + PL+V       
Sbjct: 83  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|297626297|ref|YP_003688060.1| Binding-protein-dependent transport systems inner membrane
           component [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922062|emb|CBL56626.1| Binding-protein-dependent transport systems inner membrane
           component [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 296

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  V+  I+A++  +PVG  +       + I P+     A PA    PL+V  V  Y 
Sbjct: 71  TIWEAVLGCIVATVFALPVGYLVARVRLAEAAISPYLAASQAIPAVALAPLLVIWVG-YG 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P + L  L++F   + +L + + G  +  ++  E A     +GWR  RYI  P     
Sbjct: 130 LTPIVLLCSLIVF---FPLLLSTVLGLRSIDHEVVEAAELDGASGWRMIRYIEAPLSRAA 186

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPE-VVLGVL 560
            ++G       +   ++V E    G      TGLG  +    A +   G F   +VL VL
Sbjct: 187 LLSGVRNGFTLSVTGAVVGEFVMGG------TGLGLVVSMQSASADTTGLFSTLIVLCVL 240

Query: 561 IMCCF--VLALNRFL--------WHPLYLYGTRCLRL 587
            M  +  ++A+ RF          HP+ L     LRL
Sbjct: 241 AMVIYLGLIAVERFTDPYRVPRAAHPVPLETAPDLRL 277


>gi|91777497|ref|YP_552705.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690157|gb|ABE33355.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 279

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 25/211 (11%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R      I   I + +G+ +GF P   + +    Q++ A P     PLV+      
Sbjct: 81  VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW---WRYIILPG 501
            +     ++L ++F     I  N + G         E+A    + G  W    R IILPG
Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAK---VVGLDWPAVVRRIILPG 193

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL- 560
             P  +TG   A   AW A +++E  +       T G+G    ++ E      ++L ++ 
Sbjct: 194 AMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIII 247

Query: 561 --IMCCFVLALNRFL------WHPLYLYGTR 583
             I+     AL R L      WH  Y  G R
Sbjct: 248 YAIIGVVADALVRLLEAHFLTWHANYAKGAR 278


>gi|318607766|emb|CBY29264.1| taurine transport system permease protein TauC [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 296

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241


>gi|225571297|ref|ZP_03780293.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM
           15053]
 gi|225159773|gb|EEG72392.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM
           15053]
          Length = 619

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 12/134 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+++V++LLF      L + S R   ++ PILD MQ++P+  +L   ++ F       V
Sbjct: 430 VLASVVLALLFGLPVGILISNSPRANRIVRPILDTMQTMPVFVYLIPALLLFGLGNASAV 489

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           I   + AI  +    +   +  + Q    +  ++ E +RSF  + WQ  + + +P ++P 
Sbjct: 490 IATVIYAIVPV----IRLTSLGIRQ----VDTEVVEAARSFGSTRWQTLFKVQIPQAIPT 541

Query: 191 ---GLVWNMMMSMS 201
              G+   +MM+M+
Sbjct: 542 IMTGVNQTLMMAMA 555


>gi|225575131|ref|ZP_03783741.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037690|gb|EEG47936.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM
           10507]
          Length = 299

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI ++++ +P + ++   VV+         +G +  A+   FT+ V     + Y  +   
Sbjct: 142 PIFELVRPVPPIAWIPLVVVWMG-------VGLKAKALIIFFTAFV-PCVINSYTGIKLT 193

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            + L +VSR+F  S  + FW +GVP S+P +   + +++   W  +VA+EM+
Sbjct: 194 NKTLIDVSRTFGASNREIFWKVGVPSSLPMVFAGIRVALGNSWSTLVAAEML 245


>gi|104784101|ref|YP_610599.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95113088|emb|CAK17816.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Pseudomonas entomophila L48]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++  A V+ ++        AA        + P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVTFATVVCVVIGVPLGIAAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  +C++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELLDAGKAFGCSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|46907247|ref|YP_013636.1| glycine betaine/L-proline ABC transporter permease [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254823712|ref|ZP_05228713.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|254852511|ref|ZP_05241859.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254931399|ref|ZP_05264758.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|255520605|ref|ZP_05387842.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL J1-175]
 gi|300764225|ref|ZP_07074220.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|46880514|gb|AAT03813.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|258605819|gb|EEW18427.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|293582949|gb|EFF94981.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|293592934|gb|EFG00695.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|300515215|gb|EFK42267.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|328475365|gb|EGF46138.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes 220]
 gi|332311424|gb|EGJ24519.1| hypothetical protein LMOSA_19070 [Listeria monocytogenes str. Scott
           A]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|20090989|ref|NP_617064.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           acetivorans C2A]
 gi|19916076|gb|AAM05544.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           acetivorans C2A]
          Length = 276

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 14/118 (11%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QV 147
           L+AK+  L   L P LD MQ++P   +L   +++F     G V G     +FA+  + ++
Sbjct: 115 LSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFF---GLGNVPGMIATVVFAMPPAIRL 171

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            N+       +  +P++L EV+ +F  +GWQK   + +P ++P    G+   +M+S+S
Sbjct: 172 TNL------GIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLS 223


>gi|187733136|ref|YP_001879072.1| taurine transporter subunit [Shigella boydii CDC 3083-94]
 gi|187430128|gb|ACD09402.1| taurine uptake ABC transporter, permease protein [Shigella boydii
           CDC 3083-94]
 gi|320174742|gb|EFW49872.1| Taurine transport system permease protein TauC [Shigella
           dysenteriae CDC 74-1112]
          Length = 275

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + PL+V     
Sbjct: 81  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|282889665|ref|ZP_06298204.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500239|gb|EFB42519.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 552

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   M    +++LL  F  A + A    + M+L P+  ++Q IP+       V++F   Y
Sbjct: 57  TLKEMAGGFILALLVAFPLAWMMAFWESMRMILQPLFIVIQCIPMFALAPLMVMWFGWSY 116

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V+   L   F         +T ++YQ L + P+ L +  ++   + WQ F+ L +P 
Sbjct: 117 TAIVLPTALMIFFP--------LTMNIYQGLLSTPQHLADYFKTLNATPWQFFFKLQLPA 168

Query: 188 SMP 190
           S+P
Sbjct: 169 SLP 171


>gi|260778174|ref|ZP_05887067.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606187|gb|EEX32472.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
          Length = 300

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  + +           A+S R+   + P+LDIMQ++P   +L   V  
Sbjct: 102 EDTMRTLSIITVCTMLSIALGIPIGIAMARSDRIQSAVTPMLDIMQTMPAFVYLIPVV-- 159

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + +F  S  Q+ W
Sbjct: 160 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLW 212

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MMS+S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 213 GVQLPLAMPTIMAGINQTIMMSLS----------MVVIA-SMIGVKGLGQPVLKSITNQ 260


>gi|114328963|ref|YP_746120.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114317137|gb|ABI63197.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 276

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 16/206 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D+L  +WL   ++ RV+V + +A  + +P+G+ +G    + +   P  Q L       
Sbjct: 79  HGDLLTHVWL---SLKRVLVGLAVALAVGVPLGLAVGSVRVVEAATSPVFQFLRMISPLS 135

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+ V  +          +  L+ F   W IL +   G       +  +A S   T W 
Sbjct: 136 WMPVAVMVLGVGDAP----IYFLLSFAAVWPILLSTADGVKQLDRRWLLLAQSLAATRWE 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--- 549
               I+LPG+    +TG   A G  W   + +E+           GLG  + ++ ++   
Sbjct: 192 TLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLG------VAGGLGYLVLDTRDRMAY 245

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
           G    VVL + ++   + A+ R L+ 
Sbjct: 246 GELTAVVLVIGLLGFLLDAIARLLYR 271


>gi|21240957|ref|NP_640539.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21106240|gb|AAM35075.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 489

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+      
Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +G  +I   G G  I   I+  DL  IL   +    V+ L  Q LF  +  W+ 
Sbjct: 428 LG-ALIGAGGYGQPILAGIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479


>gi|330861878|emb|CBX72048.1| taurine transport system permease protein tauC [Yersinia
           enterocolitica W22703]
          Length = 296

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241


>gi|146311110|ref|YP_001176184.1| alkanesulfonate transporter permease subunit [Enterobacter sp. 638]
 gi|145317986|gb|ABP60133.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 263

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGFSLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    Q L R  + W+  + L+   
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAYSLKEAN 262


>gi|312109994|ref|YP_003988310.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|311215095|gb|ADP73699.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 279

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++FR     ++ + I +  GI +GF       + P  Q+L   P     PL +    + 
Sbjct: 83  VSVFRAAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+  G  + +  N   G         +VA   H + W+    +I+P   P
Sbjct: 143 ETSK----VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   + G AW   +V+E+         T G+G  + ++ +  +   V +G+++   
Sbjct: 199 AILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 252


>gi|238788929|ref|ZP_04632719.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
 gi|238722956|gb|EEQ14606.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
          Length = 290

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 129 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 180

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 181 RSVAQVRVRAARALGASHWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 235


>gi|269119112|ref|YP_003307289.1| binding-protein-dependent transporters inner membrane component
           [Sebaldella termitidis ATCC 33386]
 gi|268612990|gb|ACZ07358.1| binding-protein-dependent transport systems inner membrane
           component [Sebaldella termitidis ATCC 33386]
          Length = 275

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N I+G  + P  + EVA  ++   W+ +R I LP   P    G       AW   I 
Sbjct: 158 ILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALPNIFVGLRLGLSSAWMTVIA 217

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +E+ +       T+G+G  I ++        V+ G++++    + ++R L
Sbjct: 218 AELIA------STSGIGYRINDARNLLQSDVVITGIIVVGLLGVIMDRIL 261



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 18/193 (9%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++    I L+      TL   S           D ++ IP L ++   +++F      K
Sbjct: 87  RVMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPLVILWFGIGETSK 146

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VI    A+ F I  + +          + + P+   EV++ +  + W+ F  + +P+++P
Sbjct: 147 VILIAKASFFPILLNTI--------SGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALP 198

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTM 248
            +   + + +S  W  V+A+E+I          GIG  I  A  + + D++     ++ +
Sbjct: 199 NIFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVITGIIVVGL 252

Query: 249 LGVIFLYDQLLFR 261
           LGVI   D++L R
Sbjct: 253 LGVIM--DRILDR 263


>gi|268590427|ref|ZP_06124648.1| glycine betaine/L-proline transport system permease protein ProW
           [Providencia rettgeri DSM 1131]
 gi|291314341|gb|EFE54794.1| glycine betaine/L-proline transport system permease protein ProW
           [Providencia rettgeri DSM 1131]
          Length = 391

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 205 ARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 259

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 260 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 312

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 313 VVIASMIAVG-------GLGQMVLRGIGRLDM 337


>gi|125539527|gb|EAY85922.1| hypothetical protein OsI_07285 [Oryza sativa Indica Group]
          Length = 541

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 356 ARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 410

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 411 TIL---GIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 463

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 464 VVIASMIAVG-------GLGQMVLRGIGRLDM 488


>gi|332163281|ref|YP_004299858.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667511|gb|ADZ44155.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 296

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241


>gi|306824964|ref|ZP_07458307.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432791|gb|EFM35764.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 305

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    VIP
Sbjct: 230 AIQMVVGNSAVIP 242


>gi|170724070|ref|YP_001751758.1| choline ABC transporter permease [Pseudomonas putida W619]
 gi|169762073|gb|ACA75389.1| choline ABC transporter, permease protein [Pseudomonas putida W619]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 25/168 (14%)

Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           P+LD+MQ++P   +L  T+  F + + PG +       +FAI  +    +T   Y  +C+
Sbjct: 128 PVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICD 178

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           +P++L +  ++F  S  Q    + +P +MP    G+   +M+S+S          M+V+ 
Sbjct: 179 VPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLS----------MVVIA 228

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             ++   G+G  +  A+   D+     A L ++ +  + D++  +P +
Sbjct: 229 -ALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQPEV 275


>gi|52424605|ref|YP_087742.1| ProW protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306657|gb|AAU37157.1| ProW protein [Mannheimia succiniciproducens MBEL55E]
          Length = 338

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 157 ARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 211

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P  L E +++F  S  Q  + + +P +MP    G+   +M+S+S     
Sbjct: 212 TILGIQ---QVPEALIEAAQAFGASKKQLLYKVQLPLAMPSIMAGVNQTLMLSLS----M 264

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 265 VVIASMIAVG-------GLGQMVLRGIGRLDM 289


>gi|322832257|ref|YP_004212284.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321167458|gb|ADW73157.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 263

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 21/192 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R L    I      +   +   SR    +L   L ++++IP L  +   +++F    
Sbjct: 64  STFRALIGFAIGGSLGLLLGFITGLSRWGERLLDSSLQMLRNIPHLALIPLVILWFGIDE 123

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+    L  +F I+         + Y  + NI R L E+SRS+ LSG+  F  + +P 
Sbjct: 124 SAKIFLVALGTLFPIY--------LNTYHGIRNIDRGLLEMSRSYGLSGFPLFIQVVLPG 175

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---I 241
           ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++    +
Sbjct: 176 ALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIV 228

Query: 242 LYAMLTMLGVIF 253
           LYA+L  L  + 
Sbjct: 229 LYAILGKLADVL 240


>gi|227497478|ref|ZP_03927707.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinomyces urogenitalis DSM 15434]
 gi|226833052|gb|EEH65435.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinomyces urogenitalis DSM 15434]
          Length = 277

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G  L  IF+ F       TF M QS  ++PR+LEE +R    S +Q FW + +P + PGL
Sbjct: 143 GVALPGIFSAFG------TFLMRQSFMSLPRELEESARLDGASPFQTFWKVMLPLARPGL 196

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + ++   W  ++   ++   +T +PL
Sbjct: 197 SAVAITTVLWSWNDLLWPLVVTTRETSMPL 226


>gi|170693806|ref|ZP_02884963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141224|gb|EDT09395.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 287

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 34/68 (50%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L+EV+R F    WQ+  YL VP ++P L   + ++ +  W  +V 
Sbjct: 167 VTLSTLQGFRQTPASLDEVARVFAYKRWQRIVYLVVPAAVPTLATGVRLAFTKAWLALVV 226

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 227 VELVASSE 234


>gi|84499626|ref|ZP_00997914.1| sulfonate ABC transporter, permease protein, putative [Oceanicola
           batsensis HTCC2597]
 gi|84392770|gb|EAQ04981.1| sulfonate ABC transporter, permease protein, putative [Oceanicola
           batsensis HTCC2597]
          Length = 278

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 20/161 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFS 153
           R GMV  P++  +  IP +  L   V++F     G   G++ A I F  FT  V     +
Sbjct: 118 RAGMV--PLVAALFPIPKIALLPLFVIWF-----GIGEGSKYALIAFGTFTPTV----VA 166

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y ++ N+ R L  + +SF LS W     + +P +MPG++  + +S++     +VA+EM+
Sbjct: 167 TYGAVDNVDRTLIRMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML 226

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252
             G       GIG+YI  A    DL  +     +L++LGVI
Sbjct: 227 --GAEF----GIGAYILQAGSLYDLERLFAGVVILSLLGVI 261


>gi|320539493|ref|ZP_08039162.1| putative glycine betaine transporter subunit [Serratia symbiotica
           str. Tucson]
 gi|320030618|gb|EFW12628.1| putative glycine betaine transporter subunit [Serratia symbiotica
           str. Tucson]
          Length = 349

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  M
Sbjct: 164 SRSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRM 218

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P +L E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 219 TI---LGINQVPEELIEAAQSFGASPRQLLFKVQLPLAMPTIMVGVNQTLMLALS----M 271

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 272 VVIASMIAVG-------GLGQIVLRGIGRLDM 296


>gi|302340292|ref|YP_003805498.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637477|gb|ADK82904.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 251

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 41/73 (56%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L+M+    W +  N+ +G    P  ++E+A+++ +T  +   +++LP IFP  ++G  TA
Sbjct: 117 LVMVHSALWPVYLNLQSGIDEIPPRYREMAANWEMTMTQRLFHLVLPSIFPSLLSGLKTA 176

Query: 514 CGGAWNASIVSEV 526
               W A I +E+
Sbjct: 177 WARCWRALIAAEM 189


>gi|148974204|ref|ZP_01811737.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3]
 gi|145965901|gb|EDK31149.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3]
          Length = 285

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 96  QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 155

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +   
Sbjct: 156 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLL 206

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV  T++   G+G  +  A+   ++   
Sbjct: 207 KVELPAALPSI-------MAGVTQCIMLSLSMVVIATLVGADGLGKPVVRALNTVNISQG 259

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 260 FEAGLAIVLVAIILDRLCKTP 280


>gi|197334765|ref|YP_002155547.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio fischeri MJ11]
 gi|197316255|gb|ACH65702.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio fischeri MJ11]
          Length = 360

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+SR     + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 165 ARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P DL E   SF  +  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 220 TILGIQ---QVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|307132314|ref|YP_003884330.1| glycine betaine ABC transporter membrane protein [Dickeya dadantii
           3937]
 gi|306529843|gb|ADM99773.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 406

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 220 AHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 274

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 275 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 327

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 328 VVIASMIAVG-------GLGQMVLRGIGRLDM 352


>gi|296159783|ref|ZP_06842605.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295889997|gb|EFG69793.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 279

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 25/211 (11%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R      I   I + +G+ +GF P   + +    Q++ A P     PLV+      
Sbjct: 81  VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW---WRYIILPG 501
            +     ++L ++F     I  N + G         E+A    + G  W    R IILPG
Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAK---VVGLDWPAVVRRIILPG 193

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL- 560
             P  +TG   A   AW A +++E  +       T G+G    ++ E      ++L ++ 
Sbjct: 194 AMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIII 247

Query: 561 --IMCCFVLALNRFL------WHPLYLYGTR 583
             I+     AL R L      WH  Y  G R
Sbjct: 248 YAIIGVVADALVRLLEAHFLTWHANYAKGAR 278


>gi|295702996|ref|YP_003596071.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           DSM 319]
 gi|294800655|gb|ADF37721.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium DSM 319]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 92/182 (50%), Gaps = 27/182 (14%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T   +L++++IS++        A++S +   ++ PILD MQ++P   +L   + +
Sbjct: 89  QETMDTLALVLTSVLISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALFF 148

Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           F + + PG +     + IFA+  T ++ N+       +  +P DL E + ++  +  QK 
Sbjct: 149 FGIGVVPGVI----SSVIFAMPPTIRLTNL------GIREVPADLVEAANAYGSTTKQKL 198

Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           + + +P +    M G+  ++M+S+S          M+V+  +++  PG+G+ +  A+   
Sbjct: 199 FKVQLPLATKTIMAGINQSIMLSLS----------MVVIA-SLVGAPGLGAEVYRAVSRL 247

Query: 237 DL 238
           ++
Sbjct: 248 EV 249


>gi|188533859|ref|YP_001907656.1| Nitrate transporter permease component [Erwinia tasmaniensis
           Et1/99]
 gi|188028901|emb|CAO96767.1| Nitrate transporter permease component [Erwinia tasmaniensis
           Et1/99]
          Length = 287

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +  L +L   ++ F          AE A+ + IF   +W M  +  + +  I
Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFQR--------AEPASAWTIFICSIWPMILNTAEGVKRI 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P+D   V+R   LS +     +  P  +P ++  + +S+   W  +VA+EM+  G
Sbjct: 184 PQDYLNVARVLNLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG 238



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 4/145 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A+++ IP G  IG    I++   P   LL       + P  +  + +  
Sbjct: 98  SLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAWLP--IGLLLFQR 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P    ++ +   + W ++ N   G    P D+  VA   +++ +   R I+ P + PY
Sbjct: 156 AEPASAWTIFIC--SIWPMILNTAEGVKRIPQDYLNVARVLNLSEFTVMRKILFPAVLPY 213

Query: 506 YVTGAITACGGAWNASIVSEVASWG 530
            +TG   + G AW   + +E+ + G
Sbjct: 214 ILTGVRLSIGIAWLVIVAAEMLTGG 238


>gi|219851713|ref|YP_002466145.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
 gi|219545972|gb|ACL16422.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
          Length = 269

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 9/189 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+V   + S+I IP+GI +G    +        Q+    P   + PL    ++++
Sbjct: 75  ISLERVIVGFAVGSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPL---ALAWF 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     +  ++  GT + +L N + G  +    + E+A+       +  R ++LP   P
Sbjct: 132 KIGLTS-MVFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRTVVLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G AW   + +E+     +   ++GLG  I  S   G  P ++ G++ +  
Sbjct: 191 TIWTGLRVGFGIAWMCVVAAEM-----MPGTSSGLGYLILYSYNFGQVPVIIAGMIGIGV 245

Query: 565 FVLALNRFL 573
             L ++  L
Sbjct: 246 IGLGVDLLL 254


>gi|1384060|dbj|BAA12840.1| membrane component [Escherichia coli]
          Length = 275

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A +  IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A+  ++LF          S  +  +L PI+++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + ++ +     ++S   S  Q  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|295676387|ref|YP_003604911.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295436230|gb|ADG15400.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 33/178 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + +  N   G  + 
Sbjct: 122 QMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPVYVNTFHGIRSV 170

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 171 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 224

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNR--FLWHPLYLYGTRC 584
            +G+G     + E      VV+G+L+             +L R    WHP Y  G + 
Sbjct: 225 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKSLERLSLRWHPAYQRGAKA 282


>gi|123444121|ref|YP_001008091.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091082|emb|CAL13965.1| putative taurine transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 267

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 106 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 157

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 158 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 212


>gi|322385471|ref|ZP_08059115.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus cristatus ATCC 51100]
 gi|321270209|gb|EFX53125.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus cristatus ATCC 51100]
          Length = 305

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   VV  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|313117423|ref|YP_004044406.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
 gi|312294314|gb|ADQ68745.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 274

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 16/165 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  L     PI+ I++ IP L ++ F +++F   + G        A F +F    W   +
Sbjct: 110 SDALDDACTPIIRILRPIPPLAWIVFAIIWFGLGHSG--------AAFIVFIGAFWITFY 161

Query: 153 SMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           + Y  + +  R+L EV+ +  + + W+    + +P + P L+  +  S+   W  V+A+E
Sbjct: 162 NAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPDATPELLTGLRTSVGQCWMMVIAAE 221

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           +          PG+G  I  +         +  MLT+  V  + D
Sbjct: 222 LFGA-------PGVGYEIITSSNNLATERSVAYMLTISAVFLVSD 259



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAI 511
           + ++  G  W   +N  +G  +   +  EVA +  + T WR  R ++LP   P  +TG  
Sbjct: 148 AFIVFIGAFWITFYNAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPDATPELLTGLR 207

Query: 512 TACGGAWNASIVSEV 526
           T+ G  W   I +E+
Sbjct: 208 TSVGQCWMMVIAAEL 222


>gi|83954131|ref|ZP_00962851.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
 gi|83841168|gb|EAP80338.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
          Length = 277

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +         AA   R+   + P+LD+MQ++P   +L   +V+
Sbjct: 91  EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +          I  +Q+          + + P+ L E +++F     Q  W
Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKALLEAAQAFGAKPSQTLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KIELPYALPQIMTGLNQTIMLSLS 225


>gi|238763748|ref|ZP_04624707.1| Taurine ABC transporter, permease protein [Yersinia kristensenii
           ATCC 33638]
 gi|238698050|gb|EEP90808.1| Taurine ABC transporter, permease protein [Yersinia kristensenii
           ATCC 33638]
          Length = 287

 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 126 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 177

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 178 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 232


>gi|284034286|ref|YP_003384217.1| sugar ABC transporter permease-like protein [Kribbella flavida DSM
           17836]
 gi|283813579|gb|ADB35418.1| ABC-type sugar transport systems permease component-like protein
           [Kribbella flavida DSM 17836]
          Length = 591

 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 5/70 (7%)

Query: 446 LNPNL-WLSLLMIFGTQW--YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           L P L WL L+  FG  W  Y++    AG  A P+D     ++  +TGWR WR + LP +
Sbjct: 163 LGPGLFWLVLVSAFGWTWLGYVVSLFRAGLDAIPDDVSRTIAAEGVTGWRRWRVLELPLL 222

Query: 503 FPYYVTGAIT 512
            P  +TG +T
Sbjct: 223 RP--ITGVVT 230


>gi|307727848|ref|YP_003911061.1| choline ABC transporter permease [Burkholderia sp. CCGE1003]
 gi|307588373|gb|ADN61770.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1003]
          Length = 300

 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTFISLVLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|283784761|ref|YP_003364626.1| aliphatic sulfonates ABC transporter permease [Citrobacter
           rodentium ICC168]
 gi|282948215|emb|CBG87782.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Citrobacter rodentium ICC168]
          Length = 263

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 23/220 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R L    I          ++  SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISAWRALIGFSIGGSLGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F ++         + +  + NI R L E++RS+ LSG   F +
Sbjct: 120 FGIDETAKIFLVALGTLFPVY--------INTWHGIRNIDRGLVEMARSYGLSGLPLFLH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPSVMVGVRFALGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDIV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
               ILYA+L  L  +    QLL R  + W   + ++   
Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWHPAYHMKEAN 262


>gi|255030327|ref|ZP_05302278.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           LO28]
          Length = 236

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 48  TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 107

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 108 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 157

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S           +VV  ++I   G+G+ +  A+   D
Sbjct: 158 QLPMAKSTMMAGINQSIMLALS-----------MVVIASMIGAMGLGTRVYFAVGRND 204


>gi|167582013|ref|ZP_02374887.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 268

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +      E+
Sbjct: 108 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDAGLVEM 163

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 164 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 217

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R +  WHP Y  G R 
Sbjct: 218 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERAMLRWHPAYQPGGRA 268


>gi|54303410|ref|YP_133403.1| putative permease of ABC transporter [Photobacterium profundum SS9]
 gi|46916840|emb|CAG23603.1| putative permease of ABC transporter [Photobacterium profundum SS9]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
            T + +LSA + S++        AA    L  ++ PILD+MQ+IP   +L  T+V F + 
Sbjct: 95  ETFVLVLSATMFSVIVGVPIGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLVLFGLG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG +       IFAI  +    +T   Y  +  +P +L E  R+F  S  +  + + +
Sbjct: 155 VVPGLIS----TIIFAI--AAPIRLT---YLGISRVPEELVEAGRAFGASRMKLLFKVEL 205

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++     A 
Sbjct: 206 PAAMPNI-------MAGITQCIMLSLSMVVISALVGADGLGKPVVRALNTVNISQGFEAG 258

Query: 246 LTMLGVIFLYDQLLFRP 262
           L ++ V  + D+L   P
Sbjct: 259 LAIVLVAIILDRLCKTP 275


>gi|110638367|ref|YP_678576.1| nitrate ABC transporter permease [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281048|gb|ABG59234.1| nitrate ABC transporter, permease component [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 11/163 (6%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++++  I IP+GI +G    + + I    Q+L      V+  LV   +     +  +  S
Sbjct: 187 VLLSMFIAIPIGILLGLSETLRTSINWLIQILKPVSPVVWLLLVSMVIKTLLTDSTMDKS 246

Query: 454 LLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L+ F +      W  L N   G ++   D+  V+    +  W+    I+LP  FP   T
Sbjct: 247 FLISFISVGLCGMWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLPSSFPLIFT 306

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           G       +W   I  E+ +      ++ GLG+++ E  + G+
Sbjct: 307 GIRITVSVSWMVLIAIELLA------QSPGLGSFVWEQFQNGA 343



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + ++ +D   VS+  RL+ W+  + + +P S P +   + +++S  W  
Sbjct: 259 MWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLPSSFPLIFTGIRITVSVSWMV 318

Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260
           ++A E++         PG+GS++         D  A IL AM  + G+ FL D+++ 
Sbjct: 319 LIAIELLAQS------PGLGSFVWEQFQNGANDSNAKILVAMFVIGGIGFLLDKIMM 369


>gi|33321797|gb|AAQ06631.1| osmoprotectant transport protein OusBW [Erwinia chrysanthemi]
          Length = 406

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 220 AHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 274

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 275 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 327

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 328 VVIASMIAVG-------GLGQMVLRGIGRLDM 352


>gi|315649176|ref|ZP_07902266.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315275395|gb|EFU38753.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 277

 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 27/170 (15%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +++A +IS+L        AA SR    +++P+LD MQ++P   +L   V +F + + PG 
Sbjct: 94  VITAALISVLLGVPLGIWAAYSRSASRIIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           +     + IFAI        T  + +  +  +  +L E + +F  +  QK + + +P +M
Sbjct: 154 IA----SVIFAI------PPTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           P    G+   +M+S+S          M+V+  ++I   GIG+ +  A+ +
Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242


>gi|237730897|ref|ZP_04561378.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2]
 gi|226906436|gb|EEH92354.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2]
          Length = 263

 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 23/220 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I          ++  SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLAISSWRALIGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + +  + +I R L E++RS+ LSG+  F +
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------INTWHGIRSIDRGLVEMARSYGLSGFSLFVH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224

Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
               ILYA+L  L  +    QLL R  + W   + ++  T
Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWHPAYHVKEAT 262


>gi|116332927|ref|YP_794454.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus brevis ATCC
           367]
 gi|116098274|gb|ABJ63423.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus brevis ATCC
           367]
          Length = 506

 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 21/198 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V S+ Q+   + + +L A VI++    +        +RL  V++ I  I+Q+IP L  L 
Sbjct: 16  VQSIGQHIGLSLISLLIAAVIAIPLAIILMN----HQRLAKVMLQITSILQTIPSLALLG 71

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                   L P   IG  + +I A+    V  +  + Y  L  I   LEE + +F LS  
Sbjct: 72  I-------LIPLVGIGT-VPSIIALVIYAVMPIFQNTYSGLTTIDPSLEEAATAFGLSRR 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK-EQ 236
            K   + +P +MP ++  + ++M      ++ +  +     +I   G+G+YI L I+   
Sbjct: 124 MKLLRIELPLAMPMIISGIRIAM----VMIIGTATLAA---LIGAGGLGTYILLGIETNN 176

Query: 237 DLLAILYAMLT-MLGVIF 253
           + L I+ A+L+ +L ++F
Sbjct: 177 NALLIIGAVLSAILALVF 194


>gi|323705112|ref|ZP_08116688.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535538|gb|EGB25313.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 277

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++FR++   I+ ++  + +G+ +G  P I + + P        P     PL++     
Sbjct: 85  SVSLFRIIGGFIVGAVPGLIIGLTMGLFPIIRNILDPIVAATYPIPKLALMPLIMIM--- 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + LN +L   +++  GT + +L N  AG       + +VA ++  +   ++  + LPG  
Sbjct: 142 FGLN-DLEKIVVIAIGTFFIVLMNTAAGVINLDKIYMDVARNYGASKKDYYLTVALPGAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G A    + +E+         ++G+G  I ES      P + +  +IM 
Sbjct: 201 PMIFTGLKLGMGMALLLIVAAEMNG------ASSGIGYRIWESYNIFDIPAMFVSFIIMS 254

Query: 564 CF 565
             
Sbjct: 255 IL 256


>gi|323190755|gb|EFZ76024.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli RN587/1]
          Length = 263

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          
Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+   L  +    QLL R  + W+  + L+  T
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALFGKLADV--SAQLLERFWLRWNPAYHLKEAT 262


>gi|264677370|ref|YP_003277276.1| probable ABC transporter permease HI0355 [Comamonas testosteroni
           CNB-2]
 gi|299533068|ref|ZP_07046454.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni S44]
 gi|262207882|gb|ACY31980.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni CNB-2]
 gi|298718953|gb|EFI59924.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni S44]
          Length = 253

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +S+ L  +++P L ++QS PI+      VV     L P +V+   L A F +  S     
Sbjct: 84  RSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAGLLP-RVVITTLIAFFPLVVSTALG- 141

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                  L ++P +L E+SRS R +  +++W + +PF++P +   + +S++      V +
Sbjct: 142 -------LASVPAELVELSRSLRATTSRQYWQIRMPFAVPYVFSALKVSITLAIVGAVVA 194

Query: 211 EMI 213
           E +
Sbjct: 195 EFV 197


>gi|149188392|ref|ZP_01866685.1| putative permease of ABC transporter [Vibrio shilonii AK1]
 gi|148837610|gb|EDL54554.1| putative permease of ABC transporter [Vibrio shilonii AK1]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  +  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275


>gi|91774063|ref|YP_566755.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Methanococcoides burtonii DSM 6242]
 gi|91713078|gb|ABE53005.1| ABC transporter permease protein [Methanococcoides burtonii DSM
           6242]
          Length = 262

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           + +   L P+++I++ IP L ++ F +V+F   +         +A F +F   V+ +  +
Sbjct: 92  KNVNHALDPLIEIIRPIPPLAWIPFAIVWFGLTHT--------SAGFVVFIGAVFPVIIN 143

Query: 154 MYQSLCNIPRDLEEVSRSFR-LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +    ++P+   E ++    +S      ++ +P +MP +   + +SM  GW  +VA+EM
Sbjct: 144 TFDGFKSVPKFYVEAAKVLGCMSSGSLIRHVALPSAMPSIASGIRISMGVGWMCLVAAEM 203

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             V  T     G+G  I        +  +L  ML +LG + L+   LFR
Sbjct: 204 FGVSTT-----GLGYKIWWHYYLHQMDFVLVYML-ILGFLGLFIDRLFR 246


>gi|261252053|ref|ZP_05944627.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
 gi|260938926|gb|EEX94914.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  ++ PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTIMRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  +  +  +
Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275


>gi|330981307|gb|EGH79410.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           RD+ D         +L ++ S + LR+LS   I      V+A     SR     L P   
Sbjct: 70  RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++SIP L ++   +++       K++   + A F ++ + V         ++  I R L
Sbjct: 122 GLRSIPSLAWVALLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            EV + + LS ++    + +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAA 223


>gi|328957271|ref|YP_004374657.1| glycine betaine transport system permease protein OpuAB
           [Carnobacterium sp. 17-4]
 gi|328673595|gb|AEB29641.1| glycine betaine transport system permease protein OpuAB
           [Carnobacterium sp. 17-4]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 27/164 (16%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L A ++S++    +  L AKS+    ++ P+LD MQ++P   +L   V +F + + PG 
Sbjct: 103 VLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIPAVAFFGIGMVPG- 161

Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188
            + A L  IFAI  T +  N+       +  +  +L E + SF  +G QK + + +P + 
Sbjct: 162 -VFASL--IFAIPPTVRFTNL------GIRQVSHELVEAAESFGSTGAQKLFKVELPLAK 212

Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
              M G+   +M+++S          M+V+  ++I  PG+G  +
Sbjct: 213 STIMAGINQTVMLALS----------MVVIA-SMIGAPGLGREV 245


>gi|222148899|ref|YP_002549856.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735885|gb|ACM36848.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 25/151 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVWN 149
           A+S R    L P+LD+MQ++P   +L   V+ F     GKV G     I+AI    ++ N
Sbjct: 135 ARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIF---GIGKVPGLIAVVIYAIAPIIRLTN 191

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + R+  E + +F  S  QK + + +P ++P    G+   +MMS++    
Sbjct: 192 LGIRL------VSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTIMMSLA---- 241

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            VV + MI VG       G+G  +  AI  Q
Sbjct: 242 MVVIASMIGVG-------GLGKNVLQAITNQ 265


>gi|239818092|ref|YP_002947002.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239804669|gb|ACS21736.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 294

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 14/131 (10%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +  ++ +++   +  + W+ +RY++ P   PY++ G   A G +   ++V
Sbjct: 167 ILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 226

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573
           +E  +      + TGL + I ES+ +   P +        +LG++I   F  AL+R +  
Sbjct: 227 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFIVFA-ALSRLVLG 283

Query: 574 -WHPLYLYGTR 583
            WH   +   R
Sbjct: 284 HWHESEMRRER 294


>gi|83942956|ref|ZP_00955416.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. EE-36]
 gi|83845964|gb|EAP83841.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. EE-36]
          Length = 277

 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + +   +LSA V+ +         AA   R+   + P+LD+MQ++P   +L   +V+
Sbjct: 91  EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVF 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +          I  +Q+          + + P+ L E +++F     Q  W
Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKALLEAAQAFGAKPSQTLW 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 202 KIELPYALPQIMTGLNQTIMLSLS 225


>gi|154496983|ref|ZP_02035679.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC
           29799]
 gi|150273807|gb|EDN00924.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC
           29799]
          Length = 249

 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 16/193 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR+++ + I +    V   L     ++  V  P++ ++Q+IP + ++   +V+F   +
Sbjct: 60  TILRLIAGLAIGVGVGAVLGLLFGLCPKIEDVGTPLIHVLQAIPPVCWVVLALVWFG--F 117

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            GK        +F + T+ V  +  ++   + ++   L E++R ++ S W+   ++ +P 
Sbjct: 118 NGK------PCVFIVATATVPTVVINLSHGVRSVDPQLLEMARLYQFSRWKMLRHVTLPS 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAML 246
             P     + + + GGW   V  E++          GIG  I  A    +  AI+ +++L
Sbjct: 172 IRPYFRSALEIVIGGGWKLAVMGEVLTTNS------GIGGAITTARLNIEPDAIIAWSLL 225

Query: 247 TMLGVIFLYDQLL 259
            +LG  +L  +LL
Sbjct: 226 LVLGC-YLTQRLL 237



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 10/161 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R++  + I   +   +G+  G  P I     P   +L A P   +   VV  + ++ 
Sbjct: 60  TILRLIAGLAIGVGVGAVLGLLFGLCPKIEDVGTPLIHVLQAIPPVCW---VVLALVWFG 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N    +  ++   T   ++ N+  G  +      E+A  +  + W+  R++ LP I PY
Sbjct: 117 FNGKPCV-FIVATATVPTVVINLSHGVRSVDPQLLEMARLYQFSRWKMLRHVTLPSIRPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           + +      GG W  +++ EV +        +G+G  I  +
Sbjct: 176 FRSALEIVIGGGWKLAVMGEVLT------TNSGIGGAITTA 210


>gi|37676170|ref|NP_936566.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio vulnificus YJ016]
 gi|37200711|dbj|BAC96536.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio vulnificus YJ016]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA  R +  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPIGIMAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  +  +   
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGANRLKLLL 201

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+   +M+S+S           +VV   ++   G+G  +  A+   +
Sbjct: 202 KVELPAALPSIMAGITQCIMLSLS-----------MVVIAALVGADGLGKPVVRALNTVN 250

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ V  + D+L   P
Sbjct: 251 IAQGFEAGLAIVLVAIILDRLCKTP 275


>gi|329929493|ref|ZP_08283227.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328936381|gb|EGG32828.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 287

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 93/193 (48%), Gaps = 21/193 (10%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++  L   SR+  + L P + +++ IP L      +++F      KV+     A F ++
Sbjct: 110 LIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFFPLY 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +         +  + ++ + L EVSR  + S  Q+   L +P S+P L+  + +S++  
Sbjct: 170 VNT--------FLGIRSVDKKLFEVSRVLQYSRVQQMIKLIIPSSLPNLLMGLRLSLAVS 221

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALA----IKEQDLLAIL-YAMLTMLGVIFLYDQL 258
           W  +V +E+I  G       G+G  I LA    + EQ  + +L +A++ M+  + L+ + 
Sbjct: 222 WLGLVVAELI--GSQ----SGVGFLINLAKQSSLTEQIFVGVLVFAVVGMM--VDLFVRS 273

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W + ++
Sbjct: 274 LERRLLKWRDSYK 286


>gi|300694481|ref|YP_003750454.1| binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299076518|emb|CBJ35843.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+  +   PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 11/170 (6%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG   +  L  M   +P +  L   +V+F  L  G +I       F I  S VW ++ +
Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGSGSLI-------FVIVHSVVWAVSLN 178

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE++
Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWAFAWRTLIASELV 238

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
                     G+G YI     +  +  +   +LT++ +  L + L+FR +
Sbjct: 239 F--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|237740106|ref|ZP_04570587.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|294782809|ref|ZP_06748135.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
 gi|229422123|gb|EEO37170.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|294481450|gb|EFG29225.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPLVVS 439
            +++ RV+    I+S++ I +GI++G    ISSK + F QL    +   P   + PL++ 
Sbjct: 58  SLSLRRVLAGFFISSVLGISLGIFMG----ISSKAKEFFQLTLTAIRQIPMIAWIPLIIL 113

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 ++      ++++F   + I+ N + G  +    + EVA  + ++    +  + L
Sbjct: 114 WAGIGEVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYL 169

Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLR 535
           P   P   TG     G +W A + SE +AS   I  R
Sbjct: 170 PSALPNIFTGLRLGLGASWMAVVASELIASSSGIGYR 206


>gi|149912652|ref|ZP_01901186.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b]
 gi|149813058|gb|EDM72884.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b]
          Length = 421

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 12/166 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S GY   +FT  + LY  W    ++ RV+V     +++ IP+G  +G          P  
Sbjct: 215 SEGY--QNFTLWEHLY--W----SLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIV 266

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           + +   P     PLV+               +L+     W +     AG S         
Sbjct: 267 EFMRPVPPLALIPLVIIWAGIGETGK----IILLFLAALWIMTIAARAGVSGVAISKVHA 322

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           A S   + W+  RY+I+P   P   TGA  A G  W   + +E+ +
Sbjct: 323 AYSLGASKWQLMRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVA 368



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 15/165 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++      GK+I         +F + +W MT +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIWAGIGETGKII--------LLFLAALWIMTIAARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   Y+ +P S+P +     ++M   W  VVA+E++        
Sbjct: 316 AISKVHAAYSLGASKWQLMRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 371

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             G G  I +A + Q L  I+   + ++GVI     +L R    W
Sbjct: 372 --GAGMMIMVASRFQ-LTDIVLMGIILIGVIGYGIDILMRKAEKW 413


>gi|300790340|ref|YP_003770631.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299799854|gb|ADJ50229.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 256

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 14/202 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM   ++ I +A  + +P G+ +G  P + +      + L   P     PLV+  +    
Sbjct: 58  TMLAWLIAIAVAIAVGVPAGLLLGSVPALRTATAAIVEFLRPIPITALVPLVLLVIGS-- 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P   ++ L ++ + W I+FN I G         E A +   + +R    + LP   P+
Sbjct: 116 -GPEAKIT-LAVYASLWPIMFNTIYGMGEIDPVLMETARACGTSRFRILTSVALPQTAPF 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFPEVVLGVLIMCC 564
             TG   +   +  A +  E  +   +     GLG++ I  ST    F  V+ G ++   
Sbjct: 174 VFTGVRLSATISLIAVVSVEFLAGSQL-----GLGSFIIVASTGSARFDLVLAGTVVAG- 227

Query: 565 FVLALNRFLWHPLYLYGTRCLR 586
              AL   +   L   G R  R
Sbjct: 228 ---ALGYLINEGLEQLGKRLFR 246


>gi|221068441|ref|ZP_03544546.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220713464|gb|EED68832.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 253

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 10/100 (10%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +S+ L  +++P L ++QS PI+      VV     L P +V+   L A F +  S     
Sbjct: 84  RSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAGLLP-RVVITTLIAFFPLVVSTALG- 141

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                  L ++P +L E+SRS R +  +++W + +PF++P
Sbjct: 142 -------LASVPAELVELSRSLRATTSRQYWQIRMPFAVP 174


>gi|51244059|ref|YP_063943.1| glycine betaine/L-proline transport system permease protein (ProW)
           [Desulfotalea psychrophila LSv54]
 gi|50875096|emb|CAG34936.1| probable glycine betaine/L-proline transport system permease
           protein (ProW) [Desulfotalea psychrophila LSv54]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 24/175 (13%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M LS++V  ++       LA +S R    L P+LD MQ+ P   +L   V+ F    
Sbjct: 95  TLAMVLSSVVFCMIAGIPLGILAGRSNRFNTFLRPVLDAMQTTPAFVYLVPIVMLF---S 151

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     +FA+    V   +  + Q    +  +L E + +F  +GWQ  + + +P 
Sbjct: 152 IGNVAGVIATIVFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATGWQVLFKVQIPL 206

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           ++P    G+   +MM++S     VV + +I  G       G+G+ + L +   D+
Sbjct: 207 ALPTIMAGINQTIMMALS----MVVIAALIGAG-------GLGAPVVLGLNTLDI 250


>gi|319761857|ref|YP_004125794.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|330826291|ref|YP_004389594.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317116418|gb|ADU98906.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|329311663|gb|AEB86078.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 370

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 30/190 (15%)

Query: 73  LSAMVISLLFTFVYA----TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ ++ SLLF  V       + A S R      P+LD MQ+ P   +L   V+ F     
Sbjct: 165 LALVLTSLLFCVVLGLPLGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVVMLF---GI 221

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G V G  +  +FA+       +       L  +  DL E SR++  S WQ  W + +P +
Sbjct: 222 GNVPGVIVTIVFALPP-----LVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQLPLA 276

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P    G+   +M+S+S     VV + MI VG       G+G  +   I   D+     A
Sbjct: 277 LPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLA 322

Query: 245 MLTMLGVIFL 254
            +  LG++ L
Sbjct: 323 SIGGLGIVLL 332


>gi|253687824|ref|YP_003017014.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754402|gb|ACT12478.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 537

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR   +L P +  +  IP LG++   +V F     G   G +LA I       V   T 
Sbjct: 111 SRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GIDDGLKLAVIIKAVIIPV---TL 162

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
                + N+P  L+EV+ + RL   Q+   L +P ++P  +  + +++S  W  ++  E+
Sbjct: 163 HTQTGVRNVPHALQEVAHTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVEL 222

Query: 213 I 213
           +
Sbjct: 223 L 223


>gi|242239080|ref|YP_002987261.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242131137|gb|ACS85439.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 263

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 15/173 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ S +T R L+   I          +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLSISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + +I   L E++RS+ LSG++ F  
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRHIDSGLLEMARSYGLSGFRLFRE 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           + +P ++P ++  +  S+   W        ++V +T+    GIG Y+A+  +E
Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWL------TLIVAETISANAGIG-YLAMNARE 217



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 21/203 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R +    I   + + +G   G        +    Q+L   P     PLV+    +
Sbjct: 63  SISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G     +   E+A S+ ++G+R +R ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFRLFREVLLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G  W   IV+E  S         G+G Y+A +  +     VV+  +I+ 
Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTNVVVVAIILY 231

Query: 564 CFV--------LALNR--FLWHP 576
             +        LAL R    WHP
Sbjct: 232 ALLGKLADVIALALERIWLRWHP 254


>gi|312882313|ref|ZP_07742057.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370026|gb|EFP97534.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  +S+L       +AA    L  +L P+LD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTMSVLIGVPVGIMAAHRPWLYTILRPVLDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGMTKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|221639009|ref|YP_002525271.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221159790|gb|ACM00770.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G  +G    +   +  F   LAA P   F PL++  +           ++++
Sbjct: 63  AVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 118

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+ V G
Sbjct: 119 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 171


>gi|170721475|ref|YP_001749163.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169759478|gb|ACA72794.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
           A+S    MV+ P+LD+MQ+ P   +L   V+ F +   PG+V  A  A    I  +Q+  
Sbjct: 119 ARSPGAWMVVRPVLDVMQTTPTFVYLVPVVMLFGVGNVPGEVAVATAAMPPLIRFTQL-- 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
                   +C +  ++ E  ++F  + WQ  W + +P +MP ++  +  ++       V 
Sbjct: 177 -------GICMVDSEIVEAGQAFGANKWQLLWEVQLPLAMPTILGGLNQTVLTAMVMSVV 229

Query: 210 SEMI-VVGDTVIPLPGIG 226
             MI   G  ++ L GIG
Sbjct: 230 ISMIGAEGLGLVVLQGIG 247


>gi|15668589|ref|NP_247387.1| nitrate transporter protein NrtB homolog CmpB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2501405|sp|Q57856|Y413_METJA RecName: Full=Putative ABC transporter permease protein MJ0413
 gi|1591119|gb|AAB98402.1| nitrate transporter protein (nrtB) homolog (cmpB)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 267

 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 9/191 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+   ++AS + IP+GI +G+   ++S      +LL   P   + PL    ++++
Sbjct: 73  ISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAWVPL---SLAWF 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + +  ++  G  + IL N I+G    P    E A +    G      +++P   P
Sbjct: 130 GLG-EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGRDILIKVVIPASSP 188

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+    +      GLG  I  +        V+  ++I+  
Sbjct: 189 SILTGLRVGAGIAWMCVVAAEMLPSSN-----AGLGYLIMYAYSLSRMDVVIACMIIIGL 243

Query: 565 FVLALNRFLWH 575
             L L+R L +
Sbjct: 244 IGLVLDRGLRY 254


>gi|293365712|ref|ZP_06612421.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|306829765|ref|ZP_07462954.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|291316080|gb|EFE56524.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|304428116|gb|EFM31207.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    VIP
Sbjct: 230 AIQMVVGNSAVIP 242


>gi|222102581|ref|YP_002539620.1| ABC transporter membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium vitis S4]
 gi|221739182|gb|ACM39915.1| ABC transporter membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium vitis S4]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 17/218 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   ++LR+L   V       +   L      L  +L P L  +++IP + ++   
Sbjct: 78  ELAHHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLF 137

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F      K++       F ++          +  +L  + R + EV + FRLS  + 
Sbjct: 138 ILWFGIFETSKIVLIATGVFFPVY--------LGISTALREVDRKIVEVGKIFRLSNLEL 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W +  P  +P  V ++   +  GW FVVA+E +   +      G+G  +    +     
Sbjct: 190 VWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASE------GLGYLLVDGQQLGKPD 243

Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLER 274
            I+ A+L    +  L D LL     P++ W + +  +R
Sbjct: 244 QIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDR 281


>gi|126462024|ref|YP_001043138.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126103688|gb|ABN76366.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 266

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G  +G    +   +  F   LAA P   F PL++  +           ++++
Sbjct: 84  AVLVGIPLGALMGMMRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+ V G
Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192


>gi|332289872|ref|YP_004420724.1| taurine transporter subunit [Gallibacterium anatis UMN179]
 gi|330432768|gb|AEC17827.1| taurine transporter subunit [Gallibacterium anatis UMN179]
          Length = 251

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 14/164 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T L +   + +  +F    A L + S R+   L+P+L I Q+IP+     F +  
Sbjct: 54  QHTMVTLLEIFLGLFLGFIFGLFSAILLSISNRIATFLLPLLLISQAIPV-----FAIAP 108

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + L+ G  + +++A    I    V   T + Y  L N P    E++++ +++ WQ  + 
Sbjct: 109 LLVLWLGYGLASKVAMTILIIYFPV---TAACYDGLRNTPEIWLELAQTMQITRWQMLFK 165

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + +P ++P L   + +++S      +A    V+G+ V    G+G
Sbjct: 166 VRLPAALPALASGLRIAVS------IAPIGAVIGEWVGANQGLG 203


>gi|324993129|gb|EGC25049.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK405]
 gi|324995568|gb|EGC27480.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK678]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|297202258|ref|ZP_06919655.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197710225|gb|EDY54259.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 266

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P+LD +  +P L  L      F+N++ G   G ++A +       VW  T S   ++ 
Sbjct: 101 LEPLLDALYVVPKLALLPV----FLNMF-GLGEGPQIALVATTVFFFVWISTMS---AVI 152

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +IP    +  + F  S WQ F ++ +P S+P ++    ++       +VASE I   D  
Sbjct: 153 SIPSGHRDAGQVFGASPWQMFRHVLLPASLPSVLVGARIAAGVAVLVIVASEQIAATD-- 210

Query: 220 IPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIFLY-DQLLFRPMIVWSNKFR 271
               G+G  I  + A+ + D++ +    + +LGV+F    ++L R +  W+ + R
Sbjct: 211 ----GLGHLIFDSRALFQNDVMFVGIVCVAVLGVLFSELVRVLGRLLTPWAPRDR 261



 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 12/156 (7%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           + + ++P    L   P     P+ ++        P + L    +F   +++  + ++   
Sbjct: 97  VRAALEPLLDALYVVPKLALLPVFLNMFGLGE-GPQIALVATTVF---FFVWISTMSAVI 152

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P+  ++    F  + W+ +R+++LP   P  + GA  A G A    + SE  +     
Sbjct: 153 SIPSGHRDAGQVFGASPWQMFRHVLLPASLPSVLVGARIAAGVAVLVIVASEQIA----- 207

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T GLG  I +S  +  F   V+ V I+C  VL +
Sbjct: 208 -ATDGLGHLIFDS--RALFQNDVMFVGIVCVAVLGV 240


>gi|262373174|ref|ZP_06066453.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
 gi|262313199|gb|EEY94284.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
          Length = 293

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+   V +
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLL---VIW 155

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + +     + LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 156 FGIGETTKV-LLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 SHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A+V ++            ++ +  VL P++++++ IP L +L   V++
Sbjct: 96  QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E   +  IF S +  +  S    + +   + E  + S   S  Q FW+
Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++  ++  + + +  GW  +VASE++
Sbjct: 208 VILPTALSHILTGIRIGLGVGWSTLVASELV 238


>gi|262067155|ref|ZP_06026767.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379113|gb|EFE86631.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL----AAFPANVFFPLVVS 439
            +++ RV+    I+S++ I +GI++G    ISSK + F QL+       P   + PL++ 
Sbjct: 58  SLSLRRVLAGFFISSVLGISLGIFMG----ISSKAKEFFQLILTAIRQIPMIAWIPLIIL 113

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 ++      ++++F   + I+ N + G  +    + EVA  + ++    +  + L
Sbjct: 114 WAGIGEVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYL 169

Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLR 535
           P   P   TG     G +W A + SE +AS   I  R
Sbjct: 170 PSALPNIFTGLRLGLGASWMAVVASELIASSSGIGYR 206


>gi|115359312|ref|YP_776450.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170697541|ref|ZP_02888631.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           IOP40-10]
 gi|172064102|ref|YP_001811753.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MC40-6]
 gi|115284600|gb|ABI90116.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170137564|gb|EDT05802.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           IOP40-10]
 gi|171996619|gb|ACB67537.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MC40-6]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|46204882|ref|ZP_00049349.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 223

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVVV  ++ + + +P+G+++G    I   + P  Q+L   P   + PL    + ++ 
Sbjct: 80  SLYRVVVGFVVGAGLALPLGLFMGSSDVIYRHVNPLMQVLRPIPPIAYIPL---SILWFG 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  N     L+  G  + +L N IAG       +   A S   +    +R +ILP   PY
Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195

Query: 506 YVTGAITACGGAWNASIVSEV 526
            ++GA    G A+   IV+E+
Sbjct: 196 ILSGARIGIGTAFIVVIVAEM 216


>gi|323496152|ref|ZP_08101211.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
 gi|323318790|gb|EGA71742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  +  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275


>gi|206559984|ref|YP_002230748.1| aliphatic sulfonates transport permease [Burkholderia cenocepacia
           J2315]
 gi|198036025|emb|CAR51918.1| aliphatic sulfonates transport permease protein [Burkholderia
           cenocepacia J2315]
          Length = 270

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 270


>gi|117621146|ref|YP_857442.1| taurine transporter subunit [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562553|gb|ABK39501.1| taurine uptake ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 276

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ +  A++  + VG+ +G  P +   + P  +L    P   + PL+V       
Sbjct: 84  SLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPPLAYLPLMVIWFGIGE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +    +AG           A +     W+   Y+I+PG  P 
Sbjct: 144 TS-KVLLIYLAIFAP---VAMATLAGVQGAKQVRLRAARALGANRWQVLWYVIVPGALPD 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G  W+  + +E+ +       T G+G  +  + E  +   V+ G+L++   
Sbjct: 200 MLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAAGEFLATDVVLAGILVIALI 253

Query: 564 CFVL-----ALNRFL--WH 575
            F L     AL R L  WH
Sbjct: 254 AFTLELGLRALQRRLTPWH 272



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R+L A+  + L           S  L  +L P++++ + +P L +L   V++
Sbjct: 79  QHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPPLAYLPLMVIW 138

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+   LA IFA     V   T +  Q    +       +R+   + WQ  WY
Sbjct: 139 FGIGETSKVLLIYLA-IFA----PVAMATLAGVQGAKQV---RLRAARALGANRWQVLWY 190

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + VP ++P ++  + + +  GW  +VA+E+I
Sbjct: 191 VIVPGALPDMLTGLRIGLGVGWSTLVAAELI 221


>gi|322375501|ref|ZP_08050014.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C300]
 gi|321279764|gb|EFX56804.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C300]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    VIP
Sbjct: 230 AIQMVVGNSAVIP 242


>gi|270292471|ref|ZP_06198682.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M143]
 gi|315613426|ref|ZP_07888334.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|331266102|ref|YP_004325732.1| ABC transporter membrane-spanning permease,phosphate transport
           [Streptococcus oralis Uo5]
 gi|270278450|gb|EFA24296.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M143]
 gi|315314422|gb|EFU62466.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|326682774|emb|CBZ00391.1| ABC transporter membrane-spanning permease,phosphate transport
           [Streptococcus oralis Uo5]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    VIP
Sbjct: 230 AIQMVVGNSAVIP 242


>gi|257093017|ref|YP_003166658.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045541|gb|ACV34729.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 265

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R++V  ++  +I IP+GI +G  P +++ + P      + P     P++V    +  +  
Sbjct: 77  RLIVAGLLVILIGIPIGIVMGAAPQVNAALSPLVDPFRSAPVVALLPILVM---WMGIGE 133

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           ++ ++ L I G   Y++  V     A P  +   A     T W   R  ++P   P    
Sbjct: 134 SMKIAFLFI-GAVVYLIPMVRDAIQAVPQSYWIGARDLGATPWECIRSAVVPMAMPRIAD 192

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             I A    W    V+E     +++ R  GLG  I  +    ++ +V  G++++    LA
Sbjct: 193 AVIVAFSVMWTYITVAE-----YVNAR-EGLGQLIQNARRFSAWDQVFAGIMVIIALALA 246

Query: 569 LNRFL-WHPLYLY 580
             + + W    LY
Sbjct: 247 TYQLMIWLKRRLY 259


>gi|313619571|gb|EFR91235.1| glycine betaine transport system permease protein opuAB [Listeria
           innocua FSL S4-378]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|262377103|ref|ZP_06070328.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
 gi|262307841|gb|EEY88979.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
          Length = 271

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++ +  L L+ I G  + I  N   G  +      E+
Sbjct: 115 QMIRNIPALALIPLVIL---WFGIDESAKLFLVAI-GVFFPIYINTYHGIRSVDPQLIEM 170

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S        +G+G  
Sbjct: 171 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQSGIGYM 224

Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578
              + E      V++G+L+            +AL RFL  WH  Y
Sbjct: 225 TMNAREFLQTDVVLVGILLYALLGKLADVLAVALERFLLRWHAGY 269


>gi|332366473|gb|EGJ44221.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1059]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|125717781|ref|YP_001034914.1| phosphate ABC transporter transmembrane protein [Streptococcus
           sanguinis SK36]
 gi|323351783|ref|ZP_08087437.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis VMC66]
 gi|125497698|gb|ABN44364.1| ABC transporter membrane-spanning permease-phosphate transport,
           putative [Streptococcus sanguinis SK36]
 gi|322122269|gb|EFX93995.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis VMC66]
 gi|324990873|gb|EGC22808.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK353]
 gi|325687892|gb|EGD29912.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK72]
 gi|325689910|gb|EGD31914.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK115]
 gi|325694312|gb|EGD36226.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK150]
 gi|325696845|gb|EGD38733.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK160]
 gi|327461397|gb|EGF07728.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1]
 gi|327469554|gb|EGF15023.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK330]
 gi|327474032|gb|EGF19445.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK408]
 gi|327489255|gb|EGF21048.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1058]
 gi|328946083|gb|EGG40229.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1087]
 gi|332359768|gb|EGJ37583.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK49]
 gi|332361482|gb|EGJ39286.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1056]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|27366464|ref|NP_761991.1| choline ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|320158303|ref|YP_004190681.1| L-proline glycine betaine ABC transport system permease ProW
           [Vibrio vulnificus MO6-24/O]
 gi|27358030|gb|AAO06981.1| choline ABC transporter, permease protein [Vibrio vulnificus CMCP6]
 gi|319933615|gb|ADV88478.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Vibrio vulnificus MO6-24/O]
          Length = 266

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA  R +  +L PILD+MQ++P   +L  T+V 
Sbjct: 77  QEMLETFVLVFAATTISVLIGVPIGIMAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVL 136

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  +  +   
Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGANRLKLLL 187

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+   +M+S+S          M+V+   ++   G+G  +  A+   +
Sbjct: 188 KVELPAALPSIMAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVRALNTVN 236

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ V  + D+L   P
Sbjct: 237 IAQGFEAGLAIVLVAIILDRLCKTP 261


>gi|16128352|ref|NP_414901.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107238|ref|AP_001018.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079956|ref|YP_001729276.1| taurine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238899660|ref|YP_002925456.1| taurine transporter subunit [Escherichia coli BW2952]
 gi|256024012|ref|ZP_05437877.1| taurine transporter subunit [Escherichia sp. 4_1_40B]
 gi|300947989|ref|ZP_07162133.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957922|ref|ZP_07170092.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301025816|ref|ZP_07189323.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301647281|ref|ZP_07247098.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307137011|ref|ZP_07496367.1| taurine transporter subunit [Escherichia coli H736]
 gi|331640882|ref|ZP_08342017.1| taurine transport system permease protein TauC [Escherichia coli
           H736]
 gi|34396000|sp|Q47539|TAUC_ECOLI RecName: Full=Taurine transport system permease protein tauC
 gi|1657562|gb|AAB18090.1| membrane component [Escherichia coli str. K-12 substr. MG1655]
 gi|1786564|gb|AAC73470.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85674508|dbj|BAE76148.1| taurine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169887791|gb|ACB01498.1| taurine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238863626|gb|ACR65624.1| taurine transporter subunit [Escherichia coli BW2952]
 gi|260450443|gb|ACX40865.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|299879958|gb|EFI88169.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300315386|gb|EFJ65170.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300452453|gb|EFK16073.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|301074569|gb|EFK89375.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|315135051|dbj|BAJ42210.1| taurine transporter subunit [Escherichia coli DH1]
 gi|315616702|gb|EFU97319.1| taurine transport system permease protein tauC [Escherichia coli
           3431]
 gi|323943176|gb|EGB39332.1| inner membrane transport system [Escherichia coli E482]
 gi|331037680|gb|EGI09900.1| taurine transport system permease protein TauC [Escherichia coli
           H736]
          Length = 275

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A +  IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + +  R++ A+  ++LF          S  +  +L PI+++ + +P L +L   V++
Sbjct: 78  QHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG E + I  I+ +    +  S    + ++ +     ++S   S  Q  W+
Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220


>gi|323526223|ref|YP_004228376.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323383225|gb|ADX55316.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 288

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 34/191 (17%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQW 462
           F+P +   +    Q++   PA    PLV+           LW  +       L+  G  +
Sbjct: 116 FKP-VEIALDSTVQMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFF 163

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N   G  +   +  E+A S+ + G   +R++ILPG  P  + G   A G  W   I
Sbjct: 164 PVYVNTFHGIRSVDANLIEMARSYGVKGLALYRHVILPGALPSILVGVRFAFGLMWVTLI 223

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FL 573
           V+E  S        +G+G     + E      VV+G+L+         VLA  L R    
Sbjct: 224 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERLSLR 277

Query: 574 WHPLYLYGTRC 584
           WHP Y  G + 
Sbjct: 278 WHPAYQRGGKA 288


>gi|302553443|ref|ZP_07305785.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471061|gb|EFL34154.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 292

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+LS  +++ +       L A+SR    +L P+L++++ IP +  +   ++ F +   G 
Sbjct: 64  RILSGFLLAAVLGVATGVLVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFPSNEQGI 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V     AA F +  S     T    ++L  +    EE  R+     W+    + +P ++P
Sbjct: 124 VFITCTAAFFPVLVS-----TRHAVRALTPV---WEEAVRTMGGGRWRILGSVVLPGALP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
           G+   + + +   W  V+++EMI
Sbjct: 176 GVFGGLSVGIGVSWICVISAEMI 198


>gi|238024532|ref|YP_002908764.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
 gi|237879197|gb|ACR31529.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
          Length = 291

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    I  +  F   ++A  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 100 LLRGYAIGAVLAFALTSVAV-STRVGRDLLAMLTAMFNPLPSIALLPIALLWF-GLGTGS 157

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  +MY     +P  L    R++ L G +  W + VP ++P
Sbjct: 158 LL-------FVLVHSVLWPLALNMYTGFLGVPATLRMAGRNYGLRGLRLVWLILVPAALP 210

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 211 SILSGLRVGWAFAWRTLIAAELV 233


>gi|299132877|ref|ZP_07026072.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298593014|gb|EFI53214.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 279

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   L P L  +++IP + ++   V++       KV    +   F I+         
Sbjct: 109 ARRL---LDPTLQALRAIPSIAWVPLFVLWLGIFEMSKVALIAIGVFFPIY--------L 157

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++ ++ R + EV R FRLSG      + +P  +P  V ++   +  GW FVVA+E+
Sbjct: 158 GVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPSYVVSLRQGLGLGWMFVVAAEL 217

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           +   + +  L   G  +    K  ++LA +     +        QL F P++ W + F
Sbjct: 218 MGASEGLGYLLIDGQQLG---KPAEILAAIIVFALLGKTTDWLVQLAFAPLLRWQDAF 272



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 10/162 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G   G+ P     + P  Q L A P+  + PL V  +  + ++       L+  G  + 
Sbjct: 99  LGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFVLWLGIFEMSK----VALIAIGVFFP 154

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   V+    +      EV   F ++G    R I+LP + P YV       G  W   + 
Sbjct: 155 IYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPSYVVSLRQGLGLGWMFVVA 214

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +E+         + GLG  + +  + G   E++  +++    
Sbjct: 215 AELMG------ASEGLGYLLIDGQQLGKPAEILAAIIVFALL 250


>gi|288555332|ref|YP_003427267.1| ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288546492|gb|ADC50375.1| ABC transporter (permease) (NSB type) [Bacillus pseudofirmus OF4]
          Length = 251

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S+     L  ++  +QS+P + +L   +V F         G  LA +F I     W M
Sbjct: 82  ATSKLADETLGSLVVALQSVPSIVWLPLALVMFQ--------GGSLAILFVIILGGTWPM 133

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T +M   + N+   L   +R+    G +  W + +P S+P  +  + ++ + GW  ++A+
Sbjct: 134 TMNMRMGIKNVQPLLIRAARTMGYKGLELVWKVLIPASIPSALTGVRLAWAFGWRALMAA 193

Query: 211 EMIVVG 216
           E++  G
Sbjct: 194 ELLGRG 199


>gi|271501462|ref|YP_003334488.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270345017|gb|ACZ77782.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 286

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RVV   ++A++I +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 95  MTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG 154

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       +L+IF G+ + I+  V         D  E A +   +       +++PG  
Sbjct: 155 EMQ-----KILVIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVTRVLIPGAA 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 210 PGIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDS 246


>gi|78485498|ref|YP_391423.1| binding-protein dependent transport system inner membrane protein
           [Thiomicrospira crunogena XCL-2]
 gi|78363784|gb|ABB41749.1| ATP-binding cassette (ABC) superfamily nitrate transporter,
           permease component [Thiomicrospira crunogena XCL-2]
          Length = 332

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLL-----MIFGTQ 461
           G   +  + + P  Q+        + PLV   VS  Y   +P    + L     ++    
Sbjct: 148 GLSANAYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVYVTDDPAFDKAFLNSMFTVLLCCL 207

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W  + N  AG +    D K V+    ++ W   R I+LP   P   TG   + G AW   
Sbjct: 208 WPTIINTAAGVATVTQDLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTGLRISLGIAWMVL 267

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           I +E+ +      +  GLG ++ +  + GS
Sbjct: 268 IAAEMLA------QNPGLGKFVWDEFQNGS 291



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 11/143 (7%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L ++F +    +W    +    +  + +DL+ VS+  RLS W     + +P S+P +   
Sbjct: 196 LNSMFTVLLCCLWPTIINTAAGVATVTQDLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTG 255

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI- 252
           + +S+   W  ++A+EM+         PG+G ++         + L  +   + M+G++ 
Sbjct: 256 LRISLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMVAVIMIGIVG 309

Query: 253 FLYDQ--LLFRPMIVWSNKFRLE 273
           F+ D+  L+ +  + W     L 
Sbjct: 310 FILDRGMLVLQKAVSWDKSVTLR 332


>gi|33866448|ref|NP_898007.1| glycine betaine/proline ABC transporter [Synechococcus sp. WH 8102]
 gi|33633226|emb|CAE08431.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 8102]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 8/141 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+A +++L        LAA+ R +  +  P+LD+MQ++P   +L   V+ F     G V 
Sbjct: 108 LTASLLALAIGLPLGVLAARQRSIWQLTRPLLDLMQTMPAFVYLIPAVMLFST---GAVP 164

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 IFA+    V  +T      +  +P DL E  RSF  S WQ    + +P ++P L
Sbjct: 165 SVIATLIFAM--PPVVRLT---VLGIRQVPADLIEAGRSFGCSEWQLLTKVQLPNALPTL 219

Query: 193 VWNMMMSMSGGWFFVVASEMI 213
           +  +  ++      VV + MI
Sbjct: 220 MTGVNQTIMLALSMVVIASMI 240


>gi|328470867|gb|EGF41778.1| putative permease [Vibrio parahaemolyticus 10329]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 109 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 168

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 169 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 219

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 220 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 272

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 273 FEAGLAIVLVAIILDRLCKAP 293


>gi|261404676|ref|YP_003240917.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261281139|gb|ACX63110.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 287

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 93/193 (48%), Gaps = 21/193 (10%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++  L   SR+  + L P + +++ IP L      +++F      KV+     A F ++
Sbjct: 110 LIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFFPLY 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +         +  + ++ + L EVSR  + S  Q+   L +P S+P L+  + +S++  
Sbjct: 170 VNT--------FLGIRSVDKKLFEVSRVLQYSRVQQIIKLIIPSSLPNLLMGLRLSLAVS 221

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALA----IKEQDLLAIL-YAMLTMLGVIFLYDQL 258
           W  +V +E+I  G       G+G  I LA    + EQ  + +L +A++ M+  + L+ + 
Sbjct: 222 WLGLVVAELI--GSQ----SGVGFLINLAKQSSLTEQIFVGVLVFAVVGMM--VDLFVRS 273

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W + ++
Sbjct: 274 LERRLLKWRDSYK 286


>gi|29828678|ref|NP_823312.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29605782|dbj|BAC69847.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 303

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 11/219 (5%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I N +    +L  IW    ++ R ++  + A +I  P+G+ +     + + I P  Q L 
Sbjct: 88  IENAWLEGKLLGYIW---TSVSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQ 144

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P+  + P     V ++ LN N  +  +++ G    I   +++G    P  F     + 
Sbjct: 145 SLPSVAWVP---PAVVWFGLN-NSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAE 545
             TG R   +++LP   P YV G       +W + + +E +AS+  + +   GLG  +  
Sbjct: 201 GATGLRGTWHVVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLEN 257

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                    V   +L++    +A++  ++ PL  +  R 
Sbjct: 258 GRNAIDMAMVFEAILLILVVGIAIDLLIFSPLERWVLRS 296



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 73  LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +S  ++  LF  V  T    L A+ R +   + PIL  +QS+P + ++   VV+F     
Sbjct: 105 VSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPPAVVWF----- 159

Query: 129 GKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               G   + ++  I    V ++   +   +  +P       R+   +G +  W++ +P 
Sbjct: 160 ----GLNNSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWHVVLPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           ++PG V  +    +  W  ++A+E+I    D  +   G+G  +       D+  +  A+L
Sbjct: 216 ALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNAIDMAMVFEAIL 272

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271
            +L V    D L+F P+  W  + R
Sbjct: 273 LILVVGIAIDLLIFSPLERWVLRSR 297


>gi|22127835|ref|NP_671258.1| taurine transporter subunit [Yersinia pestis KIM 10]
 gi|45440044|ref|NP_991583.1| taurine transporter subunit [Yersinia pestis biovar Microtus str.
           91001]
 gi|51598010|ref|YP_072201.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 32953]
 gi|108809279|ref|YP_653195.1| taurine transporter subunit [Yersinia pestis Antiqua]
 gi|108814043|ref|YP_649810.1| taurine transporter subunit [Yersinia pestis Nepal516]
 gi|145597430|ref|YP_001161505.1| taurine transporter subunit [Yersinia pestis Pestoides F]
 gi|150260765|ref|ZP_01917493.1| putative taurine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153947400|ref|YP_001402884.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 31758]
 gi|162419908|ref|YP_001608012.1| taurine transporter subunit [Yersinia pestis Angola]
 gi|165927845|ref|ZP_02223677.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939995|ref|ZP_02228531.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010451|ref|ZP_02231349.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213174|ref|ZP_02239209.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398652|ref|ZP_02304176.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418878|ref|ZP_02310631.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425704|ref|ZP_02317457.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468834|ref|ZP_02333538.1| taurine ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170022521|ref|YP_001719026.1| taurine transporter subunit [Yersinia pseudotuberculosis YPIII]
 gi|186897206|ref|YP_001874318.1| taurine transporter subunit [Yersinia pseudotuberculosis PB1/+]
 gi|218927393|ref|YP_002345268.1| taurine transporter subunit [Yersinia pestis CO92]
 gi|229836334|ref|ZP_04456501.1| putative taurine transport system permease protein [Yersinia pestis
           Pestoides A]
 gi|229840042|ref|ZP_04460201.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842124|ref|ZP_04462279.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904576|ref|ZP_04519687.1| putative taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|270488210|ref|ZP_06205284.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294502269|ref|YP_003566331.1| putative taurine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21960968|gb|AAM87509.1|AE014000_13 taurine ABC transport system inner membrane permease protein
           [Yersinia pestis KIM 10]
 gi|45434899|gb|AAS60460.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51591292|emb|CAH22958.1| ABC taurine transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777691|gb|ABG20210.1| taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|108781192|gb|ABG15250.1| putative taurine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115346004|emb|CAL18869.1| putative taurine transport system permease protein [Yersinia pestis
           CO92]
 gi|145209126|gb|ABP38533.1| taurine transport system permease protein [Yersinia pestis
           Pestoides F]
 gi|149290173|gb|EDM40250.1| putative taurine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152958895|gb|ABS46356.1| taurine ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352723|gb|ABX86671.1| taurine ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165912035|gb|EDR30676.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920121|gb|EDR37422.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990541|gb|EDR42842.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205472|gb|EDR49952.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962872|gb|EDR58893.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051156|gb|EDR62564.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055394|gb|EDR65188.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749055|gb|ACA66573.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186700232|gb|ACC90861.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229678694|gb|EEO74799.1| putative taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|229690434|gb|EEO82488.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696408|gb|EEO86455.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229706402|gb|EEO92409.1| putative taurine transport system permease protein [Yersinia pestis
           Pestoides A]
 gi|262360349|gb|ACY57070.1| putative taurine transport system permease protein [Yersinia pestis
           D106004]
 gi|270336714|gb|EFA47491.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294352728|gb|ADE63069.1| putative taurine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320013319|gb|ADV96890.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 284

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 123 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 174

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++       +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 175 RSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 229



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ V ++ A ++ +P GI +G   ++   + P  ++    P   + PL+V     
Sbjct: 90  AASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGI 149

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +    +AG  +  +     A +   + W+   +++LP   
Sbjct: 150 GETS-KILLIYLAIFAP---VTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSAL 205

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 206 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 259

Query: 564 CFVLALN 570
                + 
Sbjct: 260 IIAFGME 266


>gi|323498902|ref|ZP_08103885.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
 gi|323316014|gb|EGA69042.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
          Length = 299

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  + + +         A+S R+   + P+LD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTMLSIILGIPIGIAMARSNRVQSTVTPMLDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + +F  S  Q+ W
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLW 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|116872417|ref|YP_849198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741295|emb|CAK20417.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSSIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|94310314|ref|YP_583524.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93354166|gb|ABF08255.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Cupriavidus metallidurans CH34]
          Length = 268

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  + +  N   G  A      E+A S+ ++GWR +R +ILPG  P  + G   + 
Sbjct: 139 LVALGVFFPVYLNTYHGIRAVDPALVEMARSYGLSGWRLYREVILPGALPGILVGVRFSL 198

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-------CFVL 567
           G  W   IV+E  S        +G+G     + E      V++G+L+             
Sbjct: 199 GLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLSR 252

Query: 568 ALNR--FLWHPLYL 579
           AL R    WHP YL
Sbjct: 253 ALERHWLRWHPGYL 266



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 21/166 (12%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    +L   L ++++IP L  +   +++F      K+    L   F ++         +
Sbjct: 100 RTAATLLDSTLQMVRNIPPLALIPLVILWFGIDETAKLFLVALGVFFPVY--------LN 151

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  +  +   L E++RS+ LSGW+ +  + +P ++PG++  +  S+   W       ++
Sbjct: 152 TYHGIRAVDPALVEMARSYGLSGWRLYREVILPGALPGILVGVRFSLGLMWV------IL 205

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIF 253
           +V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  + 
Sbjct: 206 IVAETISAQSGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL 250


>gi|269795239|ref|YP_003314694.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097424|gb|ACZ21860.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 293

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L QY + +T R+L    I  +   +   +   S     +L P  D ++++P L ++   V
Sbjct: 97  LGQYVAISTQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAWVPLLV 156

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+I   + A F ++T+        +  +L ++   L E  R++ LSG +  
Sbjct: 157 LWVGINEDSKIILIAIGAFFPVYTT--------VAGALRHVDPHLVEAGRAYGLSGPRLL 208

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             + +P  +P ++  + ++++  W F+VA+E++
Sbjct: 209 AQVQLPAVVPSVLAGLRLALAQSWLFLVAAELL 241


>gi|170751535|ref|YP_001757795.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170658057|gb|ACB27112.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 308

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIF +F +  + M  S  Q +  + R+   V+R+   +  Q +  + VP  +PGL+  + 
Sbjct: 172 AIFMVFIALFFTMVLSTIQQIDGVNRNYINVARTMGATKRQIYARVIVPAILPGLLAVLR 231

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++ G W  V+ +E   VG       G+G  I LA    +  ++++  +T++G++     
Sbjct: 232 LNLFGAWMVVLVAEATGVGY------GLGQVIMLARNTFN-PSLVFFTITLIGLLGFAFD 284

Query: 258 LLFR 261
           LLFR
Sbjct: 285 LLFR 288


>gi|221069604|ref|ZP_03545709.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220714627|gb|EED69995.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 287

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   I+ASI+ +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 96  MTVWRVMGGFILASIVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 155

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    LL+IF G+ + I   V         D  E A +   +     + +++PG  
Sbjct: 156 EAQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAA 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 211 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 247


>gi|91780201|ref|YP_555408.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692861|gb|ABE36058.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 283

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T S  Q     P  LEEV+R +  S WQ+  Y+ +P ++P L   + ++ +  W  +V  
Sbjct: 164 TLSTLQGFRQSPHSLEEVARGYGYSEWQRIVYVVLPAAVPTLATGVRLAFTKAWLALVVV 223

Query: 211 EMIVVGD 217
           E++   +
Sbjct: 224 ELVASSE 230


>gi|81429307|ref|YP_396308.1| putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78610950|emb|CAI56002.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 23/176 (13%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +ISL+         AKS     +  PILD MQ++P   +L   V +F +
Sbjct: 93  TQTLTLVLTSSLISLVIGVPLGIWMAKSDIAQAIFKPILDFMQTMPAFVYLIPAVAFFGI 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFW 181
            + PG            +F S ++ M  T  M    +  +P +L E + S+  + WQK  
Sbjct: 153 GMVPG------------VFASVIFAMPPTVRMTNLGIRQVPTELIEAADSYGSTEWQKLI 200

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +   L+  +  SM      ++A  M+V+  ++I   G+G+ +  A+   D
Sbjct: 201 KVQLPLAKSTLMAGVNQSM------MLALSMVVIA-SMIGAMGLGTRVYFAVGRND 249


>gi|332361839|gb|EGJ39642.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK355]
          Length = 309

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 75  PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 134

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 135 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 193

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 194 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 246


>gi|271501794|ref|YP_003334820.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270345349|gb|ACZ78114.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 400

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 214 ANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 268

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 269 TL---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 321

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346


>gi|56965478|ref|YP_177210.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911722|dbj|BAD66249.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 255

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 4/141 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R  + ++I   I + +GI  G+       +  F Q++   P     PLV+  +   
Sbjct: 61  ISLYRAFIGLLIGGAIGLLLGILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+  G  + I  N + G  +    + E+   + + GW  +R++ LPG  P
Sbjct: 121 EASK----IFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLKGWGLFRHVYLPGALP 176

Query: 505 YYVTGAITACGGAWNASIVSE 525
               G   A G  W   IV+E
Sbjct: 177 SIFVGIRYALGVMWLTLIVAE 197


>gi|16800083|ref|NP_470351.1| hypothetical protein lin1014 [Listeria innocua Clip11262]
 gi|16413473|emb|CAC96245.1| gbuB [Listeria innocua Clip11262]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|309779007|ref|ZP_07673777.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308922354|gb|EFP67981.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+  +   PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           S RLG   +  L  M   +P +  L   +V+F  L  G +I       F I  S VW ++
Sbjct: 125 SNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVS 176

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE
Sbjct: 177 LNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           ++          G+G YI     +  +  +   +LT++ +  L + L+FR +
Sbjct: 237 LVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286


>gi|220923325|ref|YP_002498627.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947932|gb|ACL58324.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 283

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + +  A V++L+         A SRR   +  P+LD+MQ++P       + VY
Sbjct: 89  QSTVETLVLVTLATVVALVIGIPVGICCALSRRAWRLFSPLLDMMQTLP-------SFVY 141

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +   P   +GA ++A FA     V  +       +  +P +L E S +F  S  QK + 
Sbjct: 142 LIPALPFFGLGA-VSACFATIVFSVPPVIRLTALGIRGVPTELVEASDAFGGSAAQKLFK 200

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + +P ++P    G+   MM+++S     VV + MI  G       G+G  +  +I+  + 
Sbjct: 201 VQLPLALPTIMAGVNQTMMLALS----MVVIAAMIGAG-------GLGREVWQSIQRLEA 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            A   A + ++ V  + D++
Sbjct: 250 GAGFEAGIGIVIVAVILDRV 269


>gi|270265364|ref|ZP_06193625.1| transporter [Serratia odorifera 4Rx13]
 gi|270040768|gb|EFA13871.1| transporter [Serratia odorifera 4Rx13]
          Length = 375

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 190 ARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 244

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 245 TI---LGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDM 322


>gi|260438039|ref|ZP_05791855.1| ABC transporter, permease protein, cysTW family [Butyrivibrio
           crossotus DSM 2876]
 gi|292809518|gb|EFF68723.1| ABC transporter, permease protein, cysTW family [Butyrivibrio
           crossotus DSM 2876]
          Length = 254

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  +G +   +  KE+A  FH + ++   YI +P   P++++G   +CG AW + I +E+
Sbjct: 134 NTFSGIAHTDSQMKEMAGVFHFSPFKKLVYIYMPYAAPHFLSGVKLSCGFAWKSGIAAEI 193


>gi|16329886|ref|NP_440614.1| ABC transporter membrane protein [Synechocystis sp. PCC 6803]
 gi|1652372|dbj|BAA17294.1| integral membrane components of other binding-protein-dependent
           transport system [Synechocystis sp. PCC 6803]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 18/159 (11%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RVV    +  ++ IP+GI +G  P I S  +P   ++   PA  F PL+   + Y  ++ 
Sbjct: 92  RVVGGFFLGGLVAIPLGILMGTFPSIRSLTEPIIGVVRYMPAPAFIPLL---IIYLGIDE 148

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              ++L+ I GT ++    ++      P +  EV  ++ + G R  + I+   I PY + 
Sbjct: 149 ASKIALIFI-GTIFFNTLMIMDAVKFIPKELIEV--TYTLGGLR--KQILFKVITPYIIP 203

Query: 509 GAITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + A       AWN  +V+E+ +  +      GLG  I
Sbjct: 204 NILDAFRINMAAAWNLVVVAELVAADN------GLGKRI 236


>gi|269793527|ref|YP_003312982.1| carbohydrate ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
 gi|269095712|gb|ACZ20148.1| carbohydrate ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
          Length = 329

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 63/196 (32%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +WIG  P          Q L   PAN FF +VV                 MI+    + +
Sbjct: 178 VWIGLEPQ---------QFLLGAPANTFFLIVV-----------------MIWIQAGFSM 211

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT-------GAI------- 511
             + A   A P+D  E A    + G + +RYI +P I P  +        G +       
Sbjct: 212 TVLSAAIKAIPDDIVEAARLDGLQGLKMFRYITVPSIRPALIVVVTTIAMGTLKVFDIVR 271

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           T  GG ++ S+V+         +R  GLGA +A          V+L +L++         
Sbjct: 272 TMTGGNFDTSVVANEFYNQSFVIRNQGLGAALA----------VILFILVV--------- 312

Query: 572 FLWHPLYLYGTRCLRL 587
               PL +Y  R LR+
Sbjct: 313 ----PLVIYNVRQLRM 324


>gi|242278292|ref|YP_002990421.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
 gi|242121186|gb|ACS78882.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 285

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 21/188 (11%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ ISLL         A+S R+  ++ PILD MQ++P   +L   ++ F          
Sbjct: 103 GAVAISLLVGIPVGIWMARSDRVETIIKPILDAMQTMPSFVYLIPVMMLF---------- 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             L  + A+F + +++M   +  +   +  +P+D+ E +R+F  +  Q  + + +P + P
Sbjct: 153 -GLGKVPALFATIIYSMPPIIRLTNVGIREVPKDVIEAARAFGATPMQTLFKVQLPLARP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +V  +  +       ++A  M+VV  ++I   G+G  + +AI   D+     A L+++ 
Sbjct: 212 TIVVGINQTT------MMALAMVVVA-SMIGAKGLGMEVLVAINRIDIGMGFEAGLSIVF 264

Query: 251 VIFLYDQL 258
           +  + D+L
Sbjct: 265 LAIIIDRL 272


>gi|7542432|gb|AAF63444.1|AF218267_1 glycine betaine/L-proline transport system permease protein
           [Pseudomonas putida]
          Length = 315

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 24/178 (13%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S TTL + L+++    L       L A+S R+  ++ P+LD MQ++P   +L   V+ F 
Sbjct: 96  SMTTLALVLTSVFFCALIGIPLGILCARSDRMERIIRPLLDAMQTLPAFVYLVPVVMLF- 154

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  +FA+    V      + Q    +P D  E +R+F  +  Q    + 
Sbjct: 155 --GIGNVPGVLVTIVFAL-PPLVRLTNLGIRQ----VPEDKIEAARAFGCTPRQMLTRVQ 207

Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +P +    M GL   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 208 LPLATSTIMAGLNQTLMLSLS----MVVIASMISVG-------GLGQMVLRGIGRLDM 254


>gi|84394016|ref|ZP_00992754.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio splendidus 12B01]
 gi|84375353|gb|EAP92262.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio splendidus 12B01]
          Length = 364

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P DL E   SF  S  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 223 TILGIQ---QVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300


>gi|323494633|ref|ZP_08099736.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
 gi|323311066|gb|EGA64227.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +A+    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPIGIMASHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGMTKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|218890352|ref|YP_002439216.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218770575|emb|CAW26340.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 274

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     I S + + VG W+G      + ++P  Q L A P+  + PL++       
Sbjct: 77  SLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   +L+  G  + +   ++AG       + E+   + ++ +   R I+LP   P 
Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +W   + +E+ +       T GLG  +++  E  S P++V+  +++   
Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
           +  L+  L   L     R LR
Sbjct: 246 LGKLSDGLLRSLE---RRALR 263



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   I      V  T    SRR    L P    +++IP L ++   +++F      K
Sbjct: 80  RVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   L A F ++         ++   +  + R   E+ R +RLS +     + +P ++P
Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   +  ++S  W F+VA+E+I          G+G  ++   +      ++ A+L +  
Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245

Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273
           +  L D LL    R  + W + F  E
Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271


>gi|146278349|ref|YP_001168508.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145556590|gb|ABP71203.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 278

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL  V+ PILD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 119 AAHRPRLYQVMSPILDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 172

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L+E + +F  +  Q+ W + +P++ P    GL   +M+S+S
Sbjct: 173 RLT---HLGVSSTPLALKEAATAFGATPRQRLWKVELPWAFPQIMTGLNQTIMLSLS 226


>gi|254422997|ref|ZP_05036715.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196190486|gb|EDX85450.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 284

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 16/204 (7%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ +G  +  F+ +  +++      ++ RV++   IAS +   VG+ IG+   I   + P
Sbjct: 67  WEVLGATIEFFSSEPGVHL----RSSIVRVLLGFAIASALGTVVGMLIGWFQVIEDLLMP 122

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND-- 478
             +LL   PA  + PL +             +  +   G  + +L + I       +D  
Sbjct: 123 PLELLRPIPAVAWIPLAILIFPTAETG----MIYITFVGAFFPVLISTIRAVENILHDVV 178

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              V      + W  ++ I++PG  P   +G     G AW   + +E+ +  +      G
Sbjct: 179 LIRVGQCLGASRWHIFKDIVIPGSLPGIASGLTIGMGNAWFCLVTAEILAGRY------G 232

Query: 539 LGAYIAESTEKGSFPEVVLGVLIM 562
           +G    ES    ++P +V+G+L++
Sbjct: 233 VGYITWESYVTSNYPPIVMGMLLI 256



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 10/117 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L+P L++++ IP + ++   ++ F          AE   I+  F    + +  S  +++
Sbjct: 119 LLMPPLELLRPIPAVAWIPLAILIFPT--------AETGMIYITFVGAFFPVLISTIRAV 170

Query: 159 CNIPRD--LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            NI  D  L  V +    S W  F  + +P S+PG+   + + M   WF +V +E++
Sbjct: 171 ENILHDVVLIRVGQCLGASRWHIFKDIVIPGSLPGIASGLTIGMGNAWFCLVTAEIL 227


>gi|262364301|gb|ACY60858.1| taurine transport system permease protein [Yersinia pestis D182038]
          Length = 171

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T +    +
Sbjct: 10  VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 61

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++       +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA+E+I
Sbjct: 62  RSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 116


>gi|170734839|ref|YP_001773953.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820877|gb|ACA95458.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 285

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 25/164 (15%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456
           VG  +G    I +  +P  Q L A P+  + P+++           LWL +       L+
Sbjct: 103 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + +   V+AG         E+ + + +     +R I+LP   P  VTG  T    
Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           AW   + +E+ +       T GLG  +++  E G  P++V GV+
Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLVFGVI 248



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +I+D +   + +  + ++   +TLR+ +          V       SRR+  +  P 
Sbjct: 62  APSEILDTL-ARMGITRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 120

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       K+    L AI A F         ++   + ++ R
Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224


>gi|269216258|ref|ZP_06160112.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
 gi|269130517|gb|EEZ61595.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RVV+ +   +++ IP+G+  G  P + +   P    L   P  V  P+++  +    
Sbjct: 59  SLYRVVIAMFAGTVLAIPLGLVCGRSPRLDAVFAPVLYFLYPLPKVVLLPVLIVLMGLAD 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + L  L IF   + +L  V   A A P D  E   S        +R++++P   P 
Sbjct: 119 -APKIALIALTIF---FQVLVTVRDAAKAVPEDSIESVRSLGAGRLDVYRHVVVPATLPE 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T    + G A      +E  +       +TGLG +I  S     +P +  G++ M   
Sbjct: 175 LFTALRISSGTAVAILFFAESLAG------STGLGYFIVNSWALLDYPRMFAGIIAMAVL 228


>gi|91780997|ref|YP_556204.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693657|gb|ABE36854.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 279

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 19/206 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R      I   I + +G+ +GF P   + +    Q++ A P     PLV+      
Sbjct: 81  VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++L ++F     I  N + G         E+A    +      R IILPG  P
Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAKVIGLDRTAVVRRIILPGAMP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI--- 561
             +TG   A   AW A +++E  +       T G+G    ++ E      +VL ++I   
Sbjct: 197 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVIVLTIVIYAF 250

Query: 562 MCCFVLALNRFL------WHPLYLYG 581
           +     AL R L      WH  Y  G
Sbjct: 251 IGVVADALVRLLEAHFLSWHANYAKG 276


>gi|73538635|ref|YP_299002.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72121972|gb|AAZ64158.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKSR +  V+ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLILGVPLGIWAAKSRVVAAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+    V   +  + Q    +  ++ E   +F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM-PPAVRLTSLGIRQ----VNMEIVEAGHAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNEVLASIQRLDI 246


>gi|259506319|ref|ZP_05749221.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
 gi|259166099|gb|EEW50653.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
          Length = 257

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   +I+ +       L  + + L   L P++ I++ +  L +L   +   ++     
Sbjct: 73  RVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLALLLD----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              AE  A+F I  S +W +  +   ++ +I     +++ +     W     + +P ++P
Sbjct: 128 ---AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISRVWLPATLP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           G++  + +S+S  W  ++ +EM+V G       GIG ++       D+ AI+ A+
Sbjct: 185 GIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIVVAI 233


>gi|257066039|ref|YP_003152295.1| binding-protein-dependent transport systems inner membrane
           component [Anaerococcus prevotii DSM 20548]
 gi|256797919|gb|ACV28574.1| binding-protein-dependent transport systems inner membrane
           component [Anaerococcus prevotii DSM 20548]
          Length = 342

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 20/207 (9%)

Query: 68  TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           ++L++L +  +I  L   +   LA    ++   + PIL ++  IP   +L   +V  +NL
Sbjct: 148 SSLKLLFTGYIIGGLLGIITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMVLAINL 207

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G        A+F I     + +T +    + N+     E +R+   +       + +P
Sbjct: 208 FQG--------AVFIIALGVWFQVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIP 259

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP +   ++ +MS     ++ +EM+ V        G+G YI       D  A +Y  +
Sbjct: 260 SAMPNIFQGLVSAMSAACNALIVAEMMGVES------GLGWYITWKSSWADYTA-MYGAI 312

Query: 247 TMLGVIFLYDQLLFRPM----IVWSNK 269
            +L V F+   +L + +    +VW N+
Sbjct: 313 ILLAVTFVIVNILIKKLSDRVLVWKNE 339



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 14/151 (9%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II  ++ I  GI  G+   ++  I P  +LL   P   + PLV+       L  NL+   
Sbjct: 158 IIGGLLGIITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMV------LAINLFQGA 211

Query: 455 LMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + I   G  + +    I G       F E A +   T     R I +P   P    G ++
Sbjct: 212 VFIIALGVWFQVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIPSAMPNIFQGLVS 271

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           A   A NA IV+E+          +GLG YI
Sbjct: 272 AMSAACNALIVAEMMG------VESGLGWYI 296


>gi|218675844|ref|YP_002394663.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
 gi|218324112|emb|CAV25283.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  VL PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +   
Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|291519896|emb|CBK75117.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Butyrivibrio fibrisolvens 16/4]
          Length = 254

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 16/135 (11%)

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           N ++++S LM F     I  N++ G ++      E+A  F I   R  R+I +P + PYY
Sbjct: 122 NLSVFISFLMAFPV---IYTNILQGLTSMDKKMLEMAQVFRIPFKRRLRFIYVPEVIPYY 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE--------VVLG 558
              A  + G  + A I +E+     I L    +G  + ++    + PE        ++L 
Sbjct: 179 QAAAALSNGLCFKAGIAAEI-----IGLPQGSIGERLYQAKIYLNTPELFAWTIVIIILS 233

Query: 559 VLIMCCFVLALNRFL 573
           ++   CF+  +N+ +
Sbjct: 234 IVFNRCFLYLINQVM 248


>gi|147676572|ref|YP_001210787.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease
           component [Pelotomaculum thermopropionicum SI]
 gi|146272669|dbj|BAF58418.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease
           component [Pelotomaculum thermopropionicum SI]
          Length = 259

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 14/190 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++    ISL        L   SR L   L P+L  +Q++P + +L   +++F       
Sbjct: 68  RVVVGYSISLAVGLSLGLLIVSSRYLDETLSPLLLGLQTLPSICWLPLAILWFGL----- 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + IF I    ++++T      + N+P     V+++    G + +  + +P + P
Sbjct: 123 ---GEDSIIFVIAIGSIFSVTMGTLSGIKNVPPIYMRVAKTMGAKGLKAYTTVVIPAAFP 179

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M      GW F  A   ++ G+ + P  G+G  + +     D+  ++  M+ ++ 
Sbjct: 180 AIIGGMKQ----GWSF--AWRALMAGELLSPKDGLGYVLTIGRDLHDMNQVVGVMIIIII 233

Query: 251 VIFLYDQLLF 260
           +  + D+ +F
Sbjct: 234 IGLIIDKFIF 243



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 364 IGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +G + N  T +QD  ++I +G  +M RVVV   I+  + + +G+ I    ++   + P  
Sbjct: 43  VGVLQNLVTGFQDSTFLIAIGA-SMKRVVVGYSISLAVGLSLGLLIVSSRYLDETLSPLL 101

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L   P+  + PL    + ++ L  +  + ++ I G+ + +    ++G    P  +  V
Sbjct: 102 LGLQTLPSICWLPL---AILWFGLGEDSIIFVIAI-GSIFSVTMGTLSGIKNVPPIYMRV 157

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           A +    G + +  +++P  FP  + G       AW A +  E+ S
Sbjct: 158 AKTMGAKGLKAYTTVVIPAAFPAIIGGMKQGWSFAWRALMAGELLS 203


>gi|254785247|ref|YP_003072675.1| nitrate transporter permease [Teredinibacter turnerae T7901]
 gi|237686520|gb|ACR13784.1| nitrate transporter, permease protein [Teredinibacter turnerae
           T7901]
          Length = 337

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  IW    T+F      + A+I+ +P+GI+ G     ++ + P  Q+        + P+
Sbjct: 126 LDQIWTSIKTVF---TGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKPVSPLAWLPI 182

Query: 437 VVSCVS-YYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           V   VS  Y      W S       + +   + W  L N   G ++   D   V     +
Sbjct: 183 VTMVVSATYVTTDEAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQL 242

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +     +++P   P   TG   + G  W   I +E+ +      +  GLG ++ +  +
Sbjct: 243 GWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQ 296

Query: 549 KG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLYGTR 583
            G   S   +++ VL +      L+R  F    L+ +G +
Sbjct: 297 NGSSNSLGRIMVAVLTIGIIGFLLDRIMFTLQNLFTFGDK 336



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W    +    + +I +DL  V +  +L  + K   L +P S+P +   + +S+  GW  
Sbjct: 215 LWPTLINTALGVASIDKDLMNVGKVLQLGWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMV 274

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260
           ++A+EM+         PG+G ++    +      L  I+ A+LT+  + FL D+++F
Sbjct: 275 LIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMVAVLTIGIIGFLLDRIMF 325


>gi|126730357|ref|ZP_01746168.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126709090|gb|EBA08145.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 421

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV++     +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +L+     W +     AG S         A S   + W+  R++I+P   P 
Sbjct: 290 LGK----IILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++         IG EL  I  +F + +W M  +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIW-------AGIG-ELGKIILLFLAALWIMAIAARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
                  + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++
Sbjct: 316 AISKVHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELV 367


>gi|89096764|ref|ZP_01169656.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL
           B-14911]
 gi|89088779|gb|EAR67888.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL
           B-14911]
          Length = 277

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 23/148 (15%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +S R   +L PILD MQ++P   +L   +++F + + PG            I  S +++M
Sbjct: 117 QSDRAQSILTPILDFMQTMPAFVYLIPAIIFFGIGVVPG------------IIASVIFSM 164

Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             ++  +   +  +P DL E S +F  +  QK + + +P +M  ++  +  S+      +
Sbjct: 165 PPTIRLTNLGIRQVPEDLVEASDAFGSTPSQKLFKVQLPLAMNTIMAGINQSI------M 218

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +A  M+V+  +++  PG+G+ +  A+ +
Sbjct: 219 LALSMVVIA-SLVGAPGLGADVYRAVTQ 245


>gi|126461621|ref|YP_001042735.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126103285|gb|ABN75963.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L+E + +F  +  Q+ W + +P++ P    GL   +M+S+S
Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232


>gi|307324086|ref|ZP_07603295.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306890535|gb|EFN21512.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 34/274 (12%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYAS 66
           P    R + P +F L+A VL + I  +        T    + DI  P+++   +    A 
Sbjct: 17  PRGARRTVHPLVFHLIALVLGVAIWAL--------TAAAGLADIPGPLSVSSRARELLAD 68

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGM--------VLVPILDIMQSIPILGFLTF 118
            T  +   A +  +L  F   TL A      M        +L P +   ++IP L  +  
Sbjct: 69  GTLTQDALASLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPL 128

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V  M +        E   IF IF +   +   + +Q +  + R L + +R    S   
Sbjct: 129 VIV-LMGI-------GETPKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRT 180

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S P ++  M + +   W  VVA+EMI          G+G  +  A    D+
Sbjct: 181 VFLKVVIPASTPFILVGMRIGLGAAWATVVAAEMIGAQK------GLGFEMVHAQTYYDV 234

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             I   ++++  +  + D+LL    R +  W  +
Sbjct: 235 PTIFVGLISIGVIGLVMDRLLLVAERRLTAWQER 268



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++   + +++ +PVG  +G+ P     ++P+ Q     P     PLV+  +    
Sbjct: 78  SLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIGE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +++  L  F +     F  + G      D   V  +   T    +  +++P   P+
Sbjct: 138 -TPKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRT---VFLKVVIPASTPF 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   + +E+           GLG  +  +      P + +G++ +   
Sbjct: 194 ILVGMRIGLGAAWATVVAAEMIGA------QKGLGFEMVHAQTYYDVPTIFVGLISIGVI 247

Query: 566 VLALNRFL 573
            L ++R L
Sbjct: 248 GLVMDRLL 255


>gi|256848544|ref|ZP_05553985.1| phosphate ABC transporter, permease PstC [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256714596|gb|EEU29576.1| phosphate ABC transporter, permease PstC [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 301

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 102 PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           PI++++  IP  + G++  TVV  +   ++ G   G  LAAI  +F   +  MT     S
Sbjct: 119 PIVELLVGIPSVVYGYVGLTVVIPFLQKMFGGTGFGI-LAAIVVLFLMVLPTMTSMTIDS 177

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P+     S     + WQ    + +P +  G++  M+  M+  +   +A +M++   
Sbjct: 178 LNAVPKSYRMASAGLGATRWQTISRIILPSAKGGILTAMIFGMARAFGEALAVQMVIGNT 237

Query: 218 TVIP 221
           TVIP
Sbjct: 238 TVIP 241


>gi|77462729|ref|YP_352233.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77387147|gb|ABA78332.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L+E + +F  +  Q+ W + +P++ P    GL   +M+S+S
Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232


>gi|86144740|ref|ZP_01063072.1| putative permease of ABC transporter [Vibrio sp. MED222]
 gi|85837639|gb|EAQ55751.1| putative permease of ABC transporter [Vibrio sp. MED222]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  VL PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +   
Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|302337418|ref|YP_003802624.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634603|gb|ADK80030.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  VV  +I+A +I +PVGIW   +  +   ++P    +   PA V+    +  V ++ 
Sbjct: 96  TLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYL---IPAVLFFK 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P   +   +IF     +    + G    P + KE A SF  T  +      LP   P 
Sbjct: 153 LGPVPGVIATLIFAMPPSVRLTNL-GIRQVPKEIKEAAKSFGATSHQMLLKAELPVALPT 211

Query: 506 YVTG 509
            + G
Sbjct: 212 ILAG 215



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 22/157 (14%)

Query: 69  TLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T+  LS +V S++   + A      ++K   +  ++ P+LD MQ++P   +L   V++F 
Sbjct: 93  TMETLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYLIPAVLFF- 151

Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               G V G     IFA+  S ++ N+       +  +P++++E ++SF  +  Q     
Sbjct: 152 --KLGPVPGVIATLIFAMPPSVRLTNL------GIRQVPKEIKEAAKSFGATSHQMLLKA 203

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
            +P ++P    G+   +M+++S     VV + MI  G
Sbjct: 204 ELPVALPTILAGVNQTIMLALS----MVVIAGMIGAG 236


>gi|158522774|ref|YP_001530644.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
 gi|158511600|gb|ABW68567.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 22/144 (15%)

Query: 69  TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T+  ++ +VI++LF          L+A S+    ++ PILD+MQ++P   +L   + +F 
Sbjct: 88  TVSTMALIVIAVLFAIAIGVPLGILSALSQTAYRIITPILDVMQTMPAFVYLIPAIPFF- 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFW 181
                      L A+ AIF++ ++++   +  +   +  +PR+L E + +F  S  QK +
Sbjct: 147 ----------GLGAVGAIFSTVIFSVPPCIRLTCLGIKQVPRELVEAADAFGSSRGQKLF 196

Query: 182 YLGVPFS----MPGLVWNMMMSMS 201
            + +P +    M G+   +M+++S
Sbjct: 197 KVQLPIAKTTMMAGINQTIMLALS 220


>gi|150397506|ref|YP_001327973.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029021|gb|ABR61138.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 281

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + T   +L+A  +S+         AA+   +   + PILD+MQ+IP   +L   ++ 
Sbjct: 91  QETTETLALVLAATFVSMAVGVPLGIAAARRAWIYSFMRPILDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +++          + + P  L E + SF  + WQ   
Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +PF+MP    GL   +M+S+S
Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225


>gi|148257687|ref|YP_001242272.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409860|gb|ABQ38366.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 258

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++AS+I +P+G+ +G    I + ++PF       PA+ F PL++      
Sbjct: 67  MTVWRVVGGFVLASVIAVPLGLLMGAYKPIEAFLEPFVSFARYLPASAFIPLLILWAGIG 126

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + I+  +         D  E A +   +       ++LP   
Sbjct: 127 ELQ-----KLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIGRVLLPSAA 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 182 PDIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 218


>gi|327459831|gb|EGF06171.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1057]
          Length = 305

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P   +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSGKEFGALPMVLGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|312136841|ref|YP_004004178.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermus fervidus DSM 2088]
 gi|311224560|gb|ADP77416.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermus fervidus DSM 2088]
          Length = 250

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 12/162 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RVV+  +IAS I IP+GI IG+   I +   P  Q+L   P     PL     +   
Sbjct: 58  TLMRVVLGFLIASAIAIPLGIGIGWSETIENIFNPLIQILRPIP-----PLAWVPFALIW 112

Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               L   + +IF G+ + IL N +         F E A        +    ++LPG  P
Sbjct: 113 FGIGLKSEVFIIFIGSFFPILLNTVDAVKGVEKVFIESAYVLGANEQQILTKVVLPGSLP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             V G     G  +  ++ +E+ +        +GLG  I +S
Sbjct: 173 GIVLGMRVGFGIGFMCTVAAEMIA------AKSGLGYLIMDS 208


>gi|296129229|ref|YP_003636479.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296021044|gb|ADG74280.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 288

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR   ++L P L  ++++P L ++   +++       K+    + A F ++T+       
Sbjct: 124 SRAGDVLLAPTLAAIRAVPSLAWVPLLILWMKIGEESKITLVAIGAFFPVYTT------- 176

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  +L ++   L E  R+F L G + F  + +P  +P ++  + + ++  W F+VA+E+
Sbjct: 177 -VAAALRHVDPHLVEAGRAFGLRGVELFRSVQLPAVIPSVMSGLRLGLAQAWLFLVAAEL 235

Query: 213 IVV 215
           I  
Sbjct: 236 IAA 238


>gi|218709173|ref|YP_002416794.1| glycine betaine/L-proline transport system permease ProW [Vibrio
           splendidus LGP32]
 gi|218322192|emb|CAV18306.1| Glycine betaine/L-proline transport system permease protein proW
           [Vibrio splendidus LGP32]
          Length = 364

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P DL E   SF  S  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 223 TILGIQ---QVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300


>gi|163758586|ref|ZP_02165673.1| ABC transporter permease [Hoeflea phototrophica DFL-43]
 gi|162283876|gb|EDQ34160.1| ABC transporter permease [Hoeflea phototrophica DFL-43]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +I+N   +++ +        T+  V+    ++  I +P+GIW+  RP + + IQP   L+
Sbjct: 87  FIINQDLWKETVE-------TLVLVISAAFMSMAIGVPIGIWLAHRPKLYAYIQPILDLM 139

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P  V+  + V  +    L P L +++  IF +   I    + G ++ P    E   +
Sbjct: 140 QTMPTFVYL-IPVLILFGLGLAPGLLVTI--IFASPAPIRLTYL-GITSVPKPMIEAGQA 195

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITAC 514
           F  +  +  R + LP   P  + G +T C
Sbjct: 196 FGASPGQLLRKVELPAALPTIMAG-LTQC 223


>gi|118500403|gb|ABK97401.1| MsmH [uncultured bacterium Sargasso-2222818]
          Length = 272

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV    I+A II IP G+ +    +      P  ++L   P   + P  +     +    
Sbjct: 78  RVFAGFIMAQIIGIPFGLALAVNRYFKDIFFPPFEILRPIPPLAWVPASI----VFWPTT 133

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + ++ +   G  + I+ NV+ GA +    +   A S   T W  +  IILPG  P   T
Sbjct: 134 EMSIAFVTFLGAFFTIVINVLGGAKSIDIRYLRAAQSMGATQWHLFTKIILPGTLPSIFT 193

Query: 509 GAITACGGAWNASIVSEV 526
           GA    G  W   +  E+
Sbjct: 194 GAAVGMGITWEVVLAGEM 211


>gi|83943670|ref|ZP_00956128.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83954653|ref|ZP_00963364.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840937|gb|EAP80108.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83845350|gb|EAP83229.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 242

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 18/155 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 85  LVPLVAALFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYAAV 135

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS W     + +P +MPG++  + +S++     +VA+EM+  G  
Sbjct: 136 DNVDRGLIRMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251
                GIG+YI  A    DL  +     +L++LGV
Sbjct: 194 Y----GIGAYILEAGSLYDLERLFAGVVILSVLGV 224


>gi|15598644|ref|NP_252138.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107102982|ref|ZP_01366900.1| hypothetical protein PaerPA_01004051 [Pseudomonas aeruginosa PACS2]
 gi|254236402|ref|ZP_04929725.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719]
 gi|254242134|ref|ZP_04935456.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192]
 gi|9949589|gb|AAG06836.1|AE004765_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126168333|gb|EAZ53844.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719]
 gi|126195512|gb|EAZ59575.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192]
          Length = 274

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     I S + + VG W+G      + ++P  Q L A P+  + PL++       
Sbjct: 77  SLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +   +L+  G  + +   ++AG       + E+   + ++ +   R I+LP   P 
Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +W   + +E+ +       T GLG  +++  E  S P++V+  +++   
Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
           +  L+  L   L     R LR
Sbjct: 246 LGKLSDGLLRSLE---RRALR 263



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   I      V  T    SRR    L P    +++IP L ++   +++F      K
Sbjct: 80  RVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   L A F ++         ++   +  + R   E+ R +RLS +     + +P ++P
Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   +  ++S  W F+VA+E+I          G+G  ++   +      ++ A+L +  
Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245

Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273
           +  L D LL    R  + W + F  E
Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271


>gi|226314292|ref|YP_002774188.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226097242|dbj|BAH45684.1| probable ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           F M Q+  NIP+D EE ++    + +Q +W + +P   P L    + +  G W  ++A  
Sbjct: 155 FLMRQAFLNIPKDYEEAAKLDGCNPFQIYWRVFLPMCKPSLATLAVFTFMGKWNEILAPV 214

Query: 212 MIVVGDTVIPLP-GIGSYIALAIKEQDLLAILYAMLTMLG--VIFLYDQLLF 260
           + ++ D    LP GI S ++   K +D L +  A+++++   ++FL+ +  F
Sbjct: 215 IYLISDENFTLPIGILS-LSGQYKTEDQLLVAGALISLIPILIVFLFAEKYF 265


>gi|253990652|ref|YP_003042008.1| glycine betaine transporter membrane protein [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782102|emb|CAQ85266.1| glycine betaine/l-proline transport system permease protein prow
           [Photorhabdus asymbiotica]
          Length = 361

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 176 SRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLF---GIGNVPGVIVTIIFAL--PPIVRL 230

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 231 TI---LGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 284 VVIASMIAVG-------GLGQMVLRGIGRLDM 308


>gi|313624276|gb|EFR94323.1| glycine betaine transport system permease protein opuAB [Listeria
           innocua FSL J1-023]
          Length = 282

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  +  +L E + SF  + WQK W +
Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|85704303|ref|ZP_01035406.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. 217]
 gi|85671623|gb|EAQ26481.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. 217]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 25/175 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 118 AAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI- 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T   +  + N P+ L E +++F  +  Q  W + +P+++P    GL   +M+S+S   
Sbjct: 172 RLT---HLGISNTPQPLLEAAQAFGATNSQTLWKVELPYALPQIMAGLNQTIMLSLS--- 225

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  M+V+G  ++   G+G  +  AI   ++     + L ++ V  + D++L
Sbjct: 226 -------MVVIG-ALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272


>gi|325521967|gb|EGD00659.1| choline ABC transporter, permease protein [Burkholderia sp. TJI49]
          Length = 298

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  V+ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|325964252|ref|YP_004242158.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470339|gb|ADX74024.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 257

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P  +   A P  V  P+++  +    +  ++ ++++ I G  W +L N I G  A   
Sbjct: 91  LEPTLEFFRAIPPPVLVPVLMLLMG---ITDSMKVTVI-ISGCIWPVLLNTIEGVRAVDP 146

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              + A ++ I+GW   RY++LP   P  + G   +        ++SE+ +       ++
Sbjct: 147 VLSDSAHTYGISGWARIRYLVLPSASPQIMAGVRQSLSLGLILMVISEMFA------SSS 200

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           GLG  I +     + PE+  G++++    +A++
Sbjct: 201 GLGFTIVQFQRSFAIPEMWSGIVVLGLLGVAMS 233


>gi|260777812|ref|ZP_05886705.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605825|gb|EEX32110.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPVGVMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGQAFGASKMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275


>gi|163857217|ref|YP_001631515.1| taurine ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163260945|emb|CAP43247.1| taurine ABC transporter, permease protein [Bordetella petrii]
          Length = 238

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++  +++P +  +   +VYF        IG E A I  +F +  +     MY+ +  I
Sbjct: 80  PVINFFRALPPIALIPLVIVYFG-------IG-ESAKIAILFYASFFAGVIVMYEGIAQI 131

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                 VSR+   S  + F  + VP ++P ++  + +++   W  +VASE+I        
Sbjct: 132 NPIYVRVSRTLGASDGEIFRKVIVPLTIPHMLTALRVALGVAWATLVASELIAAQQ---- 187

Query: 222 LPGIGSYIALAIKEQDL-----LAILYAMLTMLGVIFLYDQLLFRP----MIVWSNK 269
             G+G+ I      QD      L I+Y  +  +G+I L   L+ R     ++ W  +
Sbjct: 188 --GLGALI------QDASSFFQLDIIYVGIICIGLIALVMDLILRAAARRLVAWQER 236



 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +PVG  +G+   + S + P      A P     PLV   + Y+ +  +  +++L  + + 
Sbjct: 62  VPVGFVLGWYKSVRSFVDPVINFFRALPPIALIPLV---IVYFGIGESAKIAILF-YASF 117

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  +  +  G +     +  V+ +   +    +R +I+P   P+ +T    A G AW   
Sbjct: 118 FAGVIVMYEGIAQINPIYVRVSRTLGASDGEIFRKVIVPLTIPHMLTALRVALGVAWATL 177

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + SE+ +         GLGA I +++       + +G++ +    L ++  L
Sbjct: 178 VASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIGLIALVMDLIL 223


>gi|170742926|ref|YP_001771581.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           sp. 4-46]
 gi|168197200|gb|ACA19147.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           sp. 4-46]
          Length = 279

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+AIF IF   +W M  +    +    R+   V+R+  +   ++ + + +P + P ++  
Sbjct: 151 LSAIFVIFICSLWPMLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTG 210

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           M +S+   W  +VA+EM+V G       GIG ++        +  ++ ++L +  V  + 
Sbjct: 211 MRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGMVL 264

Query: 256 DQLLFR 261
           DQLL R
Sbjct: 265 DQLLAR 270



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 12/170 (7%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWY 463
           G  IG  P +S  + PF Q+L       + PL +  +    L+     ++ +IF  + W 
Sbjct: 110 GFLIGMSPLMSRALDPFIQVLKPVSPLAWMPLALYTIKDSGLS-----AIFVIFICSLWP 164

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +L N   G +    ++  VA +  +   R    +ILP   P  +TG   + G AW   + 
Sbjct: 165 MLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIVA 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +E+   G      TG+G ++       S   V+  +L++    + L++ L
Sbjct: 225 AEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLL 268


>gi|150401416|ref|YP_001325182.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus aeolicus Nankai-3]
 gi|150014119|gb|ABR56570.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus aeolicus Nankai-3]
          Length = 254

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 9/191 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RVV   +IA ++ +P+GI +G+   I        +LL   P   + PL    ++++
Sbjct: 60  ISIKRVVSGFLIAGLVAVPIGISMGYFSTIRDFFDAGIELLRPIPPLAWVPL---ALAWF 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     L ++ I G  + IL N IAG    P    + A +           II+P   P
Sbjct: 117 GIGETSMLFIIFI-GAFFPILINTIAGVKGVPTILIDSAQTLGAKQKDILLKIIIPASSP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+           GLG  I  +        VV  ++I+  
Sbjct: 176 SILTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYMLSRMDIVVASMIIIGL 230

Query: 565 FVLALNRFLWH 575
             L L++ L +
Sbjct: 231 IGLTLDKVLRY 241


>gi|125717254|ref|YP_001034387.1| glycine/betaine ABC transporter permease [Streptococcus sanguinis
           SK36]
 gi|125497171|gb|ABN43837.1| ABC transporter, glycine-betaine/proline permease protein, putative
           [Streptococcus sanguinis SK36]
          Length = 574

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  V+ P+LD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  I  +L E S SF  +G QK + + +P +    + G+   +M+++S    
Sbjct: 176 L------AIRQISTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G  +  A++  D+
Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251


>gi|254455337|ref|ZP_05068766.1| ABC transporter, membrane spanning protein (glycine betaine)
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082339|gb|EDZ59765.1| ABC transporter, membrane spanning protein (glycine betaine)
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 295

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 27/192 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L +KS R    ++P+LD+MQ+IP   +L   +   M L  GKV G     I+A+    V 
Sbjct: 124 LMSKSSRAERTILPVLDMMQTIPSFVYL---IPIIMLLGIGKVPGLLAVCIYAL--PPVV 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T      +  + ++  E + +F  +  QK   + +P S+P    G+   +MM+++   
Sbjct: 179 RLT---NLGIREVDKETLEAAEAFGATPMQKLRSVQIPLSLPTIFAGINQTIMMALA--- 232

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
                  M+V+  ++I + G+G  I  AI  Q L   L   L ++ +  ++D++      
Sbjct: 233 -------MVVIA-SMIGVRGLGVPILQAISNQYLALGLMNGLAIVALAIIFDRVTQE--- 281

Query: 265 VWSNKFRLERTT 276
            + N+ +  R T
Sbjct: 282 -YGNRIQRHRGT 292


>gi|332557611|ref|ZP_08411933.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|332275323|gb|EGJ20638.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L+E + +F  +  Q+ W + +P++ P    GL   +M+S+S
Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232


>gi|300767567|ref|ZP_07077477.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300494552|gb|EFK29710.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 309

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           RR   +L P+ +++  IP  + GF+   VV  +  N + G   G  L+  F +F   +  
Sbjct: 117 RRGAKILRPVTELLVGIPSVVYGFIGLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPT 175

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T     +L ++PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A
Sbjct: 176 VTSMTADALNSVPRYYREASLALGATRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALA 235

Query: 210 SEMIVVGDTVIP 221
            +M++   T++P
Sbjct: 236 VQMVIGNATLLP 247


>gi|209520913|ref|ZP_03269652.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209498637|gb|EDZ98753.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 282

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 33/178 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + +  N   G  + 
Sbjct: 122 QMIRNIPALAMIPLVI-----------LWFGIEESAKVFLVALGVFFPVYVNTFHGIRSV 170

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 171 DLNLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 224

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLI---------MCCFVLALNRFLWHPLYLYGTRC 584
            +G+G     + E      VV+G+L+         M    L      WHP Y  G + 
Sbjct: 225 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKSLERVSLRWHPAYQRGAQA 282


>gi|197294983|ref|YP_002153524.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944462|emb|CAR57064.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 238

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFL 116
             L  YA +  L ++ +M +++        L ++ R  R     + + +I  +IP L  L
Sbjct: 36  DDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAVL 95

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F        IG  + AI A+F + +  +T + Y+ + N+P  L E ++   ++G
Sbjct: 96  AIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVPAALREAAKGIGMTG 147

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMS 201
           WQ    + +P ++P +V  +  +++
Sbjct: 148 WQSLVRVELPNALPIIVGGVRTALA 172


>gi|119720452|ref|YP_920947.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
 gi|119525572|gb|ABL78944.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
          Length = 270

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 32/63 (50%)

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +IPRDLEE    F LS  Q F  +  P ++PGL    M +    W  V AS ++ + + 
Sbjct: 156 VSIPRDLEEAGLVFGLSRVQVFTKITAPLALPGLSAAAMFTFVTSWNEVFASTILTLKER 215

Query: 219 VIP 221
            +P
Sbjct: 216 TLP 218


>gi|78066175|ref|YP_368944.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. 383]
 gi|77966920|gb|ABB08300.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia sp. 383]
          Length = 270

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 270


>gi|115351517|ref|YP_773356.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170698693|ref|ZP_02889759.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|115281505|gb|ABI87022.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170136397|gb|EDT04659.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 270

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA----LNRFLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA         WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERTTLRWHPAYQSGAKA 270


>gi|288555637|ref|YP_003427572.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           pseudofirmus OF4]
 gi|288546797|gb|ADC50680.1| ABC permease nitrate/sulfonate/bicarbonate [Bacillus pseudofirmus
           OF4]
          Length = 246

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++ +VIS +     A    +   +   L P+L I Q+IPI+      V++F      KV
Sbjct: 61  VITGLVISTILGVTVAICMHRCPVIERALYPLLVISQTIPIIALAPIFVLWFGYSVWSKV 120

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   L   F I        T +MY  L + P++L+E+ ++   S +  F  L VP S+P 
Sbjct: 121 VVTVLITFFPI--------TVNMYDGLKSTPKELKELFQTMNASPFATFMKLYVPHSLPS 172

Query: 192 LVWNMMMSM 200
            +  M +++
Sbjct: 173 FLSGMKVAV 181


>gi|163801661|ref|ZP_02195559.1| putative permease of ABC transporter [Vibrio sp. AND4]
 gi|159174578|gb|EDP59380.1| putative permease of ABC transporter [Vibrio sp. AND4]
          Length = 293

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 104 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 163

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 164 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGKAFGASRMKLLF 214

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 215 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 267

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 268 FEAGLAIVLVAIILDRLCKAP 288


>gi|146310501|ref|YP_001175575.1| taurine transporter subunit [Enterobacter sp. 638]
 gi|145317377|gb|ABP59524.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI +G  P +   + P  +L    P   + PL+V        +  + L  L IF   
Sbjct: 99  IPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 156

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  + +AG  +        A S   +  +   ++ILPG  P  +TG     G  W+  
Sbjct: 157 --VAMSAVAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTL 214

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T GLG  +  + E  +   V+ G++++      L 
Sbjct: 215 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIMVIAVIAFGLE 257


>gi|28872433|ref|NP_795052.1| taurine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855688|gb|AAO58747.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 285

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A++  IPVGI IG          P  + 
Sbjct: 73  GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +  L L  L IF     I     AG           A 
Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATAAGVRTVDPARVRAAQ 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 241

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267


>gi|78045723|ref|YP_361898.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78034153|emb|CAJ21798.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 490

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419


>gi|297204810|ref|ZP_06922207.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197712524|gb|EDY56558.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 322

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI--FTSQVWNMTFSMYQSLC 159
           P+  ++++   LGF TF  V    + PG      LA +F I  F +        MY +L 
Sbjct: 162 PVTSLLET---LGFHTFGEV----IAPGN-----LAVLFTIIAFWTGAGGWIVVMYGALN 209

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D+ E +R    +GWQ  W + +P     +V+ ++++ +GG    V  +++ +  T 
Sbjct: 210 NIPKDVMEAARIDGANGWQTAWRVQIPMLRKWIVYMVILAFAGGAQLFVEPQLLSLASTG 269

Query: 220 I 220
           +
Sbjct: 270 V 270


>gi|149201736|ref|ZP_01878710.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
 gi|149144784|gb|EDM32813.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 25/175 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 118 AAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI- 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T   +  + N P+ L E +++F  +  Q  W + +P+++P    GL   +M+S+S   
Sbjct: 172 RLT---HLGISNTPQPLLEAAQAFGATNRQTLWKVELPYALPQIMAGLNQTIMLSLS--- 225

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  M+V+G  ++   G+G  +  AI   ++     + L ++ V  + D++L
Sbjct: 226 -------MVVIG-ALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272


>gi|23100910|ref|NP_694377.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22779144|dbj|BAC15411.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 286

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 25/146 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQV 147
           L +KS+    +  PILD MQ++P   +L   V +F     G V G   + IFA   T + 
Sbjct: 123 LMSKSKIANTIFTPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASLIFATPPTVRF 179

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
            N+       +  + +DL E S SF  +G QK + + +P +    M G+   +M+++S  
Sbjct: 180 TNL------GIRQVSKDLVEASDSFGSTGTQKLFKVELPMARSTIMAGINQTVMLALS-- 231

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYI 229
                   M+V+  ++I  PG+GS +
Sbjct: 232 --------MVVIA-SMIGAPGLGSQV 248


>gi|302522618|ref|ZP_07274960.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302431513|gb|EFL03329.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 303

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + + +T   +L  IW    ++ R +   ++A +I  P+G+ +     + + I P    
Sbjct: 86  GELSDAWTRGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 142

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P     V +  LN ++  +++++ G    I   +++G    P  +     
Sbjct: 143 LQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 198

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543
           +   TG R   +I+LP   P Y+ G       +W + + +E +AS   + +   GLG  +
Sbjct: 199 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 255

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  S   V L + ++    +A++  ++ PL     R LR
Sbjct: 256 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 295


>gi|167033694|ref|YP_001668925.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860182|gb|ABY98589.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 317

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 25/173 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S RL  ++ P+LD MQ++P   +L   V+ F     G V G  +  +FA+    V   
Sbjct: 124 ARSNRLESIIRPLLDAMQTLPAFVYLVPVVMLF---GIGNVPGVLVTIVFAL-PPLVRLT 179

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFF 206
              + Q    +P D  E +R+F  +  Q    + +P +    M GL   +M+S+S     
Sbjct: 180 NLGIRQ----VPEDKIEAARAFGCTPRQMLTRVQLPLATSTIMAGLNQTLMLSLS----M 231

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAMLTMLGVIFLYDQL 258
           VV + MI VG       G+G  +   I   D+ LA +  +  +L  IFL D+L
Sbjct: 232 VVIASMISVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFL-DRL 276


>gi|221638590|ref|YP_002524852.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221159371|gb|ACM00351.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 286

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 127 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 180

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L+E + +F  +  Q+ W + +P++ P    GL   +M+S+S
Sbjct: 181 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 234


>gi|295699467|ref|YP_003607360.1| choline ABC transporter permease [Burkholderia sp. CCGE1002]
 gi|295438680|gb|ADG17849.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1002]
          Length = 300

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ VISL+         AKSR + M++ P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++  ++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLTAL-----GIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|156742360|ref|YP_001432489.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156233688|gb|ABU58471.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +LP++ + T    LS   I+L  +       A+ R     L P+L   Q++PI+     
Sbjct: 77  ETLPRHIAVTMSAALSGFGIALAISLSLGYALAQVRAFDRALTPLLAASQAVPIVAVAPL 136

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++       +V+ A L   F I ++     T   ++S   +PR+L +++R    + W 
Sbjct: 137 IVLWVGVGLESRVLVATLVTFFPILSA-----TIVAFRS---VPRELIDMARISGANRWH 188

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
               + +P ++PG+   +   ++      +A+   VVG+ V    G+G+ I +A
Sbjct: 189 LLRSVELPLALPGIFGGVKAGLA------LATTGAVVGEFVGGRDGLGALINIA 236


>gi|146305523|ref|YP_001185988.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145573724|gb|ABP83256.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 294

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S+ +ISLL        AAKS R+  ++ P+LD MQ++P   +L    + F     G+V G
Sbjct: 98  SSTLISLLLGIPLGIWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLF---GLGRVPG 154

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190
                IFA+    V   +  + Q    + +++ E  +SF  +  Q  + + +P +MP   
Sbjct: 155 IIATVIFAM-PPAVRLTSLGIRQ----VNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIM 209

Query: 191 -GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 210 AGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 247


>gi|25027925|ref|NP_737979.1| putative nitrate transport permease protein [Corynebacterium
           efficiens YS-314]
 gi|23493208|dbj|BAC18179.1| putative nitrate transport permease protein [Corynebacterium
           efficiens YS-314]
          Length = 261

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   +I+ +       L  + + L   L P++ I++ +  L +L   +   ++     
Sbjct: 77  RVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLALLLD----- 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              AE  A+F I  S +W +  +   ++ +I     +++ +     W     + +P ++P
Sbjct: 132 ---AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISRVWLPATLP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           G++  + +S+S  W  ++ +EM+V G       GIG ++       D+ AI+ A+
Sbjct: 189 GIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIVVAI 237


>gi|134298313|ref|YP_001111809.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134051013|gb|ABO48984.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 251

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 31/156 (19%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR ++  I++ ++ +P+G+ +G        IQPF   L   P       V+S      
Sbjct: 61  SLFRGLMGFILSVMVGMPLGLLMGINNLARRFIQPFVVTLQVVP-------VIS------ 107

Query: 446 LNPNLWLSLLMI-FGTQW------------YILFNVIAGASAFPNDFKEVASSFHITGWR 492
                WL L M+ FG++              I+FNV+ G       + E+A  F +    
Sbjct: 108 -----WLVLAMVWFGSERVPVFVVVITTLPLIIFNVVQGVMNVEAQYTEMAKVFKVNKKE 162

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               I  P I PY++    +A G  W A  ++E  S
Sbjct: 163 VLLKIYFPQILPYFLAAMSSALGTTWKAVAMAEFLS 198


>gi|114326749|ref|YP_743906.1| glycine betaine/L-proline transport system permease proW
           [Granulibacter bethesdensis CGDNIH1]
 gi|114314923|gb|ABI60983.1| glycine betaine/L-proline transport system permease protein proW
           [Granulibacter bethesdensis CGDNIH1]
          Length = 283

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 18/161 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+ ++S L        AA    L   + P+LD+MQ++P   +L  T+V F + 
Sbjct: 99  QTLALVLSSALVSTLIGVPLGIAAAHRPWLAQGMRPVLDLMQTLPTFVYLIPTLVLFGLG 158

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG +     A    I  +Q+          + ++PR L E   +F  + WQ  W + +
Sbjct: 159 AVPGLISTVIFALPAPIRLTQL---------GISSVPRPLIEAGEAFGATRWQLLWKVEL 209

Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           P +    + GL   +M+S+S     VV + ++  G   +P+
Sbjct: 210 PGAKTMILAGLTQCIMLSLS----MVVIAALVGAGGLGVPV 246


>gi|254255390|ref|ZP_04948706.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124901127|gb|EAY71877.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 295

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +L  FV  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYALGVLCAFVLTSLAV-STRIGRDLLAMLTSMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  +MY     +P  L+   R++ L+G ++   + VP ++P
Sbjct: 160 LL-------FVLVHAVLWPLALNMYTGFAGVPVTLKMAGRNYGLTGLRQIALILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|209520159|ref|ZP_03268932.1| choline ABC transporter, permease protein [Burkholderia sp. H160]
 gi|209499423|gb|EDZ99505.1| choline ABC transporter, permease protein [Burkholderia sp. H160]
          Length = 300

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ VISL+         AKSR + M++ P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++  ++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLTAL-----GIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|171317503|ref|ZP_02906693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097332|gb|EDT42177.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 270

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLAL----NRFLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA         WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERTTLRWHPAYQSGAKA 270


>gi|170695677|ref|ZP_02886820.1| choline ABC transporter, permease protein [Burkholderia graminis
           C4D1M]
 gi|170139476|gb|EDT07661.1| choline ABC transporter, permease protein [Burkholderia graminis
           C4D1M]
          Length = 300

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|298293328|ref|YP_003695267.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296929839|gb|ADH90648.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 272

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/166 (19%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           W +I  +          Y++W    +++ R+ + + I++++ + +GI +GF P++ S  +
Sbjct: 53  WATIVRMATTIDVATKQYLLWWDTWLSLQRLFLGLGISALMGLVLGIVVGFIPYLRSTFE 112

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF    +  P     P++        ++      +L++FG   +I+ +V+   +A P + 
Sbjct: 113 PFFAAFSLIPPLAVLPILFIIFGLGEVSK----IVLIVFGIAPFIIRDVMLRVAAIPTEQ 168

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              A +   + W+    ++LP + P  +     + G AW   I +E
Sbjct: 169 IIKAQTLGGSTWQMITGVVLPQVMPRLIDSVRLSLGAAWLFVIAAE 214


>gi|289669834|ref|ZP_06490909.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 490

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPVFG-------IGAK-PAIAALFLYSLLPIVRNT 374

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419


>gi|270296459|ref|ZP_06202659.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273863|gb|EFA19725.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 394

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           +Y +  A SR   + L PI++++  IP  + GF    V+        NL  G+  ++G+ 
Sbjct: 198 IYMSEVANSRVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLVGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T  +  +T     ++ N PR + E S +   S WQ  + + +P+S+ G+   
Sbjct: 257 VLAIMALPT--IITVT---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  LL
Sbjct: 372 GVVLFFISLL 381


>gi|119944387|ref|YP_942067.1| glycine betaine ABC transporter, binding protein inner membrane
           component [Psychromonas ingrahamii 37]
 gi|119862991|gb|ABM02468.1| glycine betaine ABC transporter, binding protein inner membrane
           component [Psychromonas ingrahamii 37]
          Length = 356

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 166 ARSQSAAKIIRPMLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 220

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   +F  S  Q  + + +P +MP    G+   +M+S+S     
Sbjct: 221 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 273

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 274 VVIASMIAVG-------GLGQMVLRGIGRLDM 298


>gi|300718020|ref|YP_003742823.1| glycine betaine/L-proline transport system permease [Erwinia
           billingiae Eb661]
 gi|299063856|emb|CAX60976.1| glycine betaine/L-proline transport system permease protein
           [Erwinia billingiae Eb661]
          Length = 412

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 229 ARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 283

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E   SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 284 TI---LGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 336

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 337 VVIASMIAVG-------GLGQMVLRGIGRLDM 361


>gi|269128859|ref|YP_003302229.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268313817|gb|ACZ00192.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 259

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA  I +PVG+ IG  P +     P  +LL   P     PL +        N     + +
Sbjct: 73  IAVAIAVPVGVVIGALPLVDRLTGPLLELLRPIPPVALIPLALLAFG----NTGRMATTV 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F   W +L + I G  A      +   +F         ++ LPG  P+  TG   A G
Sbjct: 129 AAFACSWPVLIHTIRGLRATDPIAVDTMRTFGFGRPAVLWHVALPGAAPFIATGVRVAAG 188

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            +   +I +E+ + G       G+G+++ E+        V+LG ++
Sbjct: 189 ISLIVTITAELYAGGG-----QGIGSWLIEAGASAGQTHVILGAVV 229


>gi|145297975|ref|YP_001140816.1| glycine betaine/L-proline transport system permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850747|gb|ABO89068.1| glycine betaine/L-proline transport system permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 383

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S RL     P+LD MQ+ P   +L   V+ F     G V G  +  IFA+       M
Sbjct: 190 ARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLF---GIGNVPGVVVTVIFALPP-----M 241

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                  +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 242 IRLTMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDM 322


>gi|83644216|ref|YP_432651.1| glycine betaine transporter membrane protein [Hahella chejuensis
           KCTC 2396]
 gi|83632259|gb|ABC28226.1| ABC-type proline/glycine betaine transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 369

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +   
Sbjct: 181 ARSDRAASAVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVAVTIIFAL-PPLIRLT 236

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           +  + Q    +P DL E +RSF  S  Q  + + +P + P    G+   +M+++S     
Sbjct: 237 SLGIRQ----VPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQTLMLALS----M 288

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 289 VVIASMIAVG-------GLGQMVLRGIGRLDM 313


>gi|196250203|ref|ZP_03148897.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
 gi|196210387|gb|EDY05152.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
          Length = 261

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 15/191 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+V      L+   L Q+ S +  R L    I     FV   L    R +  +L   +
Sbjct: 44  PTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPVERLLDTSI 103

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++++IP L  +   +++F      KV    +  +F I+ + +          + N+   
Sbjct: 104 QMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTL--------HGIRNVDAG 155

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E+ R + L  WQ FW + +P ++  ++  +  ++   W        ++V +T+    G
Sbjct: 156 LLEMGRVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWL------TLIVAETIAADRG 209

Query: 225 IGSYIALAIKE 235
           IG Y+A+  +E
Sbjct: 210 IG-YLAMNARE 219


>gi|289665040|ref|ZP_06486621.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 490

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPVFG-------IGAK-PAIAALFLYSLLPIVRNT 374

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419


>gi|331003007|ref|ZP_08326519.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413051|gb|EGG92426.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 262

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 17/202 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  A  +S +F          S+    +L PI + ++ IP L ++  ++++F       
Sbjct: 73  RVGVAFGLSTVFGIALGVSMGYSKLAEAILKPIFEFIRPIPPLAWIPMSILWFGL----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               + +  F IF      +T + Y+   N+ + L   +R    S  Q F+ + +P S+P
Sbjct: 128 ---GDKSKFFIIFLGCFCFITVNTYEGTKNVDKTLIGAARMLGASERQVFFDIVLPSSVP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + ++++ GW  VV +EM+   +      G+G  I + +     + I+  ML +  
Sbjct: 185 YIFAGLQIAVTAGWSAVVGAEMVHSNE------GVGWLIVMGMTYGKTVQIMVGMLAIGL 238

Query: 251 VIFLYD---QLLFRPMIVWSNK 269
           V F+       L R +  W+N+
Sbjct: 239 VGFVLATGMAKLERRLCAWNNQ 260


>gi|323141264|ref|ZP_08076160.1| ABC transporter, substrate-binding protein, QAT family
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414221|gb|EFY05044.1| ABC transporter, substrate-binding protein, QAT family
           [Phascolarctobacterium sp. YIT 12067]
          Length = 625

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T   ++S+++ISLL       L + SR    +L P+LD MQ++P   ++   V   M 
Sbjct: 436 NETLAVVISSVIISLLLGLPIGILVSTSRLANSLLRPLLDAMQTMPTFVYMIPAV---ML 492

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L PGKV       ++AI    V  +T    Q    +  ++ E S +F  S WQ  + + +
Sbjct: 493 LGPGKVPAVLATVVYAIVP--VIRLTSHGIQ---QVDPNVVEASAAFGASRWQTLFKVQI 547

Query: 186 PFSMP----GLVWNMMMSMS 201
           P +MP    G+   MMM+++
Sbjct: 548 PQAMPTIMTGINQTMMMAVA 567


>gi|228477498|ref|ZP_04062134.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           salivarius SK126]
 gi|228250933|gb|EEK10121.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           salivarius SK126]
          Length = 304

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P ++++  IP  + GF+   VV  F+ L  G      L+  F +F   +  +TF    
Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V  
Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237

Query: 217 DTVIP 221
             VIP
Sbjct: 238 SAVIP 242


>gi|83720465|ref|YP_443020.1| aliphatic sulfonate ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167620180|ref|ZP_02388811.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257139249|ref|ZP_05587511.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83654290|gb|ABC38353.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 268

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +      E+
Sbjct: 108 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDAGLVEM 163

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 164 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 217

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G R 
Sbjct: 218 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERATLRWHPAYQPGGRA 268


>gi|312862668|ref|ZP_07722908.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           vestibularis F0396]
 gi|322516804|ref|ZP_08069706.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus vestibularis ATCC 49124]
 gi|311101528|gb|EFQ59731.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           vestibularis F0396]
 gi|322124641|gb|EFX96105.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus vestibularis ATCC 49124]
          Length = 304

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P ++++  IP  + GF+   VV  F+ L  G      L+  F +F   +  +TF    
Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V  
Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237

Query: 217 DTVIP 221
             VIP
Sbjct: 238 SAVIP 242


>gi|163737860|ref|ZP_02145276.1| glycine betaine/L-proline transport system permease, putative
           [Phaeobacter gallaeciensis BS107]
 gi|161388476|gb|EDQ12829.1| glycine betaine/L-proline transport system permease, putative
           [Phaeobacter gallaeciensis BS107]
          Length = 516

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W G +T   ++      SI I IP+G++   RP   + IQP    +   PA VF   +V 
Sbjct: 329 WEGAMTTLALLGTAACLSILIGIPLGMFAARRPRFYAFIQPIMDFMQTMPAFVF---MVP 385

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++++ +     + + MIFG    +   V+ G    P   +E A SF    W     + L
Sbjct: 386 VIAFFGVGKPAAVVVTMIFGGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDL 444

Query: 500 PGIFPYYVTG 509
           P   P    G
Sbjct: 445 PLASPSIRAG 454


>gi|187926196|ref|YP_001892541.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241665685|ref|YP_002984044.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187727950|gb|ACD29114.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240867712|gb|ACS65372.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 298

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+  +   PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           S RLG   +  L  M   +P +  L   +V+F  L  G +I       F I  S VW ++
Sbjct: 125 SNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVS 176

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE
Sbjct: 177 LNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           ++          G+G YI     +  +  +   +LT++ +  L + L+FR +
Sbjct: 237 LVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286


>gi|298290858|ref|YP_003692797.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927369|gb|ADH88178.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 301

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRV   +  A +I +P G  IG        + P  + L   P   + PLV+     
Sbjct: 108 AASLFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFLRPIPPLAYLPLVIIWAGI 167

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L ++L M+      I+    AG      +   VA +   T  +  R ++LP   
Sbjct: 168 GESAKVLVIALAMLP----PIIIATAAGTRGVDGNRLNVARALGATRAQLLRLVVLPSAS 223

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T G+G  I  +    +   VV G+ ++ 
Sbjct: 224 PSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQSAANFLATDVVVAGIFLIA 277

Query: 564 CFVLALN 570
               A  
Sbjct: 278 AVAFAFE 284


>gi|254689762|ref|ZP_05153016.1| choline ABC transporter, permease protein [Brucella abortus bv. 6
           str. 870]
 gi|256258014|ref|ZP_05463550.1| choline ABC transporter, permease protein [Brucella abortus bv. 9
           str. C68]
 gi|260755294|ref|ZP_05867642.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260884309|ref|ZP_05895923.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 9 str. C68]
 gi|297248846|ref|ZP_06932564.1| choline ABC transporter, permease [Brucella abortus bv. 5 str.
           B3196]
 gi|260675402|gb|EEX62223.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260873837|gb|EEX80906.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 9 str. C68]
 gi|297176015|gb|EFH35362.1| choline ABC transporter, permease [Brucella abortus bv. 5 str.
           B3196]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F   
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGI- 153

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             G V+G     IF I           + Q S+ + P  L E   +F  S  Q  W + +
Sbjct: 154 --GMVLGLLATVIFVI------PAPIRLTQLSISSTPASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|239630970|ref|ZP_04674001.1| taurine transport system permease protein tauC [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239527253|gb|EEQ66254.1| taurine transport system permease protein tauC [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 264

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 24/196 (12%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RV V +  A I+ IP+G++  +   I S I P  Q L   P   ++ L++      
Sbjct: 72  LTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLI------ 125

Query: 445 HLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL        LL+       I        S    +++  A+S     W+ +  +
Sbjct: 126 -----LWLGIGEASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRV 180

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++
Sbjct: 181 IFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIV 234

Query: 558 GVLIMCCFVLALNRFL 573
            +++M    + L+ FL
Sbjct: 235 DIVVMGITGMLLDWFL 250


>gi|158338271|ref|YP_001519448.1| nitrate ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158308512|gb|ABW30129.1| nitrate ABC transporter, permease protein [Acaryochloris marina
           MBIC11017]
          Length = 276

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L + W    ++ RV +   +ASII +P+GI +G     +    P+ QLL       + PL
Sbjct: 77  LGIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAWLPL 136

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +    Y   N       +++  + W  L N + G +    ++ +V+ +   +  R    
Sbjct: 137 GL----YIFRNSENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRTVFK 192

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  + G   + G AW   + +E+       L  +GLG ++       S   ++
Sbjct: 193 VIIPAALPNIIAGLRISMGIAWLVIVAAEM-------LLGSGLGYFVWNEWNNLSISNIL 245

Query: 557 LGVLIMCCFVLALNR 571
           + + I+    + L++
Sbjct: 246 VAIFIIGLVGIVLDQ 260



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR       P + +++ +  L +L   +  F N        +E   +F I  S +W    
Sbjct: 111 SRVAAKAFNPYVQLLKPVSPLAWLPLGLYIFRN--------SENTGVFIILISSIWPTLV 162

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + N+  +  +VS++   S  +  + + +P ++P ++  + +SM   W  +VA+EM
Sbjct: 163 NTVFGVANVSPEYLDVSKTLGASKLRTVFKVIIPAALPNIIAGLRISMGIAWLVIVAAEM 222

Query: 213 IV 214
           ++
Sbjct: 223 LL 224


>gi|84625907|ref|YP_453279.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84369847|dbj|BAE71005.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 489

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418


>gi|328466083|gb|EGF37255.1| phosphate ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 218

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           VL P+++++  IP  + GF+  +V+  +  N++ G   G  LA  F +F   +  +T   
Sbjct: 36  VLQPVIELLVGIPSVVYGFIGLSVIVPFIRNIFGGTGFGI-LAGTFVLFVMILPTVTSMT 94

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++
Sbjct: 95  VDALKAVPRHYREASLALGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVI 154

Query: 215 VGDTVIP 221
               ++P
Sbjct: 155 GNAALLP 161


>gi|330816756|ref|YP_004360461.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327369149|gb|AEA60505.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 277

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + I  N   G  +   +  E+
Sbjct: 117 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVSLGVFFPIYINTYHGIRSVDANLIEM 172

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 173 AKSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 226

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 227 TMNAREFLQTDVVVVGILLYAILGKLADVLAKWLERATLRWHPAYQPGAKS 277


>gi|301065292|ref|YP_003787315.1| taurine transport system permease tauC [Lactobacillus casei str.
           Zhang]
 gi|300437699|gb|ADK17465.1| taurine transport system permease protein tauC [Lactobacillus casei
           str. Zhang]
          Length = 260

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 24/196 (12%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ RV V +  A I+ IP+G++  +   I S I P  Q L   P   ++ L++      
Sbjct: 68  LTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLI------ 121

Query: 445 HLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL        LL+       I        S    +++  A+S     W+ +  +
Sbjct: 122 -----LWLGIGEASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRV 176

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++
Sbjct: 177 IFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIV 230

Query: 558 GVLIMCCFVLALNRFL 573
            +++M    + L+ FL
Sbjct: 231 DIVVMGITGMLLDWFL 246


>gi|289167579|ref|YP_003445848.1| ABC transporter, permease-phosphate transport [Streptococcus mitis
           B6]
 gi|307709070|ref|ZP_07645529.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           mitis SK564]
 gi|322376226|ref|ZP_08050719.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M334]
 gi|288907146|emb|CBJ21980.1| ABC transporter, permease-phosphate transport [Streptococcus mitis
           B6]
 gi|307620016|gb|EFN99133.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           mitis SK564]
 gi|321282033|gb|EFX59040.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M334]
          Length = 305

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   VV  +  +++ G   G  L+ IF +F   +  +TF  
Sbjct: 117 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMT 175

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V
Sbjct: 176 TDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVV 235

Query: 215 VGDTVIP 221
               V+P
Sbjct: 236 GNSAVVP 242


>gi|221196133|ref|ZP_03569180.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2M]
 gi|221202806|ref|ZP_03575825.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2]
 gi|221176740|gb|EEE09168.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2]
 gi|221182687|gb|EEE15087.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2M]
          Length = 287

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 14/214 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  + R     + +    L    + ++ +G++   +P ++V       D         +
Sbjct: 21  PPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +       K+    L AI A F      +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 193 RILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 226



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 25/178 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     I + + + VG  +G    I + ++P  Q L A P+  + P+++       
Sbjct: 87  SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +   V+AG         E+ + + +     +R I+
Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           LP   P  VTG  T    AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 196 LPAALPQIVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246


>gi|220903849|ref|YP_002479161.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868148|gb|ACL48483.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 277

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 27/207 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV------ 438
           I++ RV     IA+ + +P+GI +G++P +++ +  F  L  + P   + PLV+      
Sbjct: 63  ISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAWVPLVLAWFGML 122

Query: 439 -----------SCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASS 485
                      +   Y+H   N+ +S++ I   G  + IL + I G    P    + A  
Sbjct: 123 SLADVFSVPIGAAYPYFH---NIKVSMIFIIFIGGFYPILTSAIHGVGMVPQTLTDAARV 179

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                   +R ++LP   P  V G     G +W   + +E+     +    +G+G  I  
Sbjct: 180 LGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEM-----LPGSLSGVGYLITH 234

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G    V+ G++ +      L+R 
Sbjct: 235 AYTVGRTDVVIAGMISIGVVGALLDRL 261


>gi|153833250|ref|ZP_01985917.1| glycine betaine transport system permease protein opuAB [Vibrio
           harveyi HY01]
 gi|156977390|ref|YP_001448296.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           harveyi ATCC BAA-1116]
 gi|148870521|gb|EDL69436.1| glycine betaine transport system permease protein opuAB [Vibrio
           harveyi HY01]
 gi|156528984|gb|ABU74069.1| hypothetical protein VIBHAR_06177 [Vibrio harveyi ATCC BAA-1116]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275


>gi|58584134|ref|YP_203150.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428728|gb|AAW77765.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 490

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419


>gi|323494248|ref|ZP_08099360.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
 gi|323311411|gb|EGA64563.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
          Length = 299

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  + + V         A+S R+  ++ P+LD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTMLSIVLGIPIGIAMARSNRIQSIVTPMLDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E S +F  S  Q+ +
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGASAKQRLF 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|296109397|ref|YP_003616346.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus infernus ME]
 gi|295434211|gb|ADG13382.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus infernus ME]
          Length = 260

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 9/191 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+   IIAS++ +P+GI +G+   I++      +L    P   + PL    ++++
Sbjct: 66  ISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELFRPIPPLAWVPL---SLAWF 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   + +  ++  G  + IL N I+G    P    E A +           +++P   P
Sbjct: 123 GIG-EVSMVFIIFIGAFFPILINTISGVKGVPKPLIEAALTLGAKKRDILIKVVIPASSP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+    +     +GLG  I  +        V+  ++++  
Sbjct: 182 SILTGLRVGIGIAWMCVVAAEMLPGSN-----SGLGYLITYAYSLSRMDIVIAAMIVIGL 236

Query: 565 FVLALNRFLWH 575
             L L+R L +
Sbjct: 237 IGLILDRGLRY 247


>gi|299822937|ref|ZP_07054823.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter [Listeria grayi DSM 20601]
 gi|299816466|gb|EFI83704.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter [Listeria grayi DSM 20601]
          Length = 287

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           +KS+    ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 121 SKSKIAESIIKPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRFTN 177

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +P +L E S S+  +GWQK   + +P +    M G+   +M+++S    
Sbjct: 178 L------GIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVMLALS---- 227

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++   +
Sbjct: 228 ------MVVIA-SMIGAPGLGRQVLQALQRAQV 253



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V  ++A II +PVG+W+       S I+P    +   P  V+    +  V+++ 
Sbjct: 98  TITLVIVSSLVAIIIGVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYL---IPAVAFFG 154

Query: 446 LN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P ++ S+  IF     + F  + G    P +  E + S+  TGW+    + LP
Sbjct: 155 IGVVPGVFASV--IFALPPTVRFTNL-GIRQVPVELVEASDSYGTTGWQKLIKVELP 208


>gi|77463152|ref|YP_352656.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387570|gb|ABA78755.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 266

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G  +G    +   +  F   LAA P   F PL++  +           ++++
Sbjct: 84  AVLVGIPLGALMGMVRLLGRTLDLFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+ V G
Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192


>gi|188574536|ref|YP_001911465.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188518988|gb|ACD56933.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 489

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418


>gi|167584096|ref|ZP_02376484.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|332558026|ref|ZP_08412348.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332275738|gb|EGJ21053.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G  +G    +   +  F   LAA P   F PL++  +           ++++
Sbjct: 84  AVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+ V G
Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192


>gi|310817058|ref|YP_003965022.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308755793|gb|ADO43722.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 263

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 16/183 (8%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A ++ +P+G+ +G    +   ++ +   LAA P   F PL++       L   L   + 
Sbjct: 82  LAILVAVPLGLVMGSLKLLGKTLEVYLYALAATPRVAFIPLII-----VFLGLGLEAKIT 136

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTG-AIT 512
           ++F G    I+ N   G      +  E+A S      R +WR I+LPG  PY + G  I 
Sbjct: 137 VVFMGAVMPIVMNTYTGVQQVDRELIEMARSVGAKRRRIYWR-IVLPGSLPYLIAGLRIG 195

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A  G  N ++V+E      ++    GLG  +A         E  + VL +    + +   
Sbjct: 196 ATIGLIN-TVVAE------LYTSVRGLGGLLATYGNSFRMAEYFVVVLSLALIGVVVTEI 248

Query: 573 LWH 575
           L H
Sbjct: 249 LRH 251


>gi|160941503|ref|ZP_02088837.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435587|gb|EDP13354.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC
           BAA-613]
          Length = 277

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 8/129 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI ++++ +P + ++   VV+         IG +  A+   FT+ V     + Y  +   
Sbjct: 120 PIFELVRPVPPIAWIPLVVVWMG-------IGLKAKALIIFFTAFV-PCVINSYTGIKLT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L  VSR+F  S  + FW +GVP S+P +   + +++   W  +VA+EM+     +  
Sbjct: 172 NKTLINVSRTFGASNAEIFWKVGVPSSLPMVFAGIRVALGNSWSTLVAAEMLAASAGLGY 231

Query: 222 LPGIGSYIA 230
           +  IG  +A
Sbjct: 232 MIQIGRTVA 240


>gi|153955397|ref|YP_001396162.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219855814|ref|YP_002472936.1| hypothetical protein CKR_2471 [Clostridium kluyveri NBRC 12016]
 gi|146348255|gb|EDK34791.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219569538|dbj|BAH07522.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 205

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 12/176 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A ++ IP+G+ IG+       I P  Q+     A   FP+ +        +      + 
Sbjct: 27  LALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPVFILVFGIGETS-----KIA 81

Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +IF G QW IL + I G         + A S   + +  +R +ILP  FP  +TG   + 
Sbjct: 82  IIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFTIFRKVILPSAFPSIITGIRLSA 141

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A    I +E+         ++GLG  + ++  K   P++   ++ M    + +N
Sbjct: 142 TSAILVLIAAEMMG------ASSGLGYLLYDTQVKYQIPKMYAAIITMSLIGIIVN 191


>gi|62290461|ref|YP_222254.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700384|ref|YP_414958.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189024691|ref|YP_001935459.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237815970|ref|ZP_04594967.1| choline ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254697906|ref|ZP_05159734.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730796|ref|ZP_05189374.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|260546994|ref|ZP_05822733.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260758515|ref|ZP_05870863.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260762339|ref|ZP_05874682.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196593|gb|AAX74893.1| hypothetical glycine betaine/L-proline ABC transporter, permease
           protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616485|emb|CAJ11550.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|189020263|gb|ACD72985.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237789268|gb|EEP63479.1| choline ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|260096044|gb|EEW79921.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260668833|gb|EEX55773.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260672771|gb|EEX59592.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
          Length = 278

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +     S+  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLSISST----PASLIEAGEAFGTSRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|254249915|ref|ZP_04943235.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124876416|gb|EAY66406.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|221200267|ref|ZP_03573309.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2M]
 gi|221205947|ref|ZP_03578961.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2]
 gi|221173959|gb|EEE06392.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2]
 gi|221179608|gb|EEE12013.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2M]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|182677669|ref|YP_001831815.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633552|gb|ACB94326.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 29/202 (14%)

Query: 83  TFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            F+Y +LAA         SR++ +   P  D ++ IP + +L   V++     P K++  
Sbjct: 93  AFLYGSLAALGLGFAAGLSRKVELFFGPTFDTIRHIPAIAWLPLIVLWLGIGAPAKILVI 152

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +  F +F + V        Q +  + R+  E+++   L+ WQ    + +P +MP ++ 
Sbjct: 153 AKSVFFPVFLNTV--------QGIRQVERNYVELAKVLTLTRWQFVRQVVLPAAMPSILV 204

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252
           ++  +    W       ++VV + +  L G+G  I  A  +   D L +   ++ ++G  
Sbjct: 205 SLRYAAGLAW------ALVVVAEGLSGLEGLGFLIFRAQGLLLTDQLVVCMVIIGLVG-- 256

Query: 253 FLYDQ---LLFRPMIVWSNKFR 271
           F  D+   LL R ++ W   F 
Sbjct: 257 FSIDRVMALLQRRLLRWKQGFE 278



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 408 IGFRPHISSKIQ----PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL------SLLMI 457
           +GF   +S K++    P    +   PA  + PL+V           LWL       +L+I
Sbjct: 104 LGFAAGLSRKVELFFGPTFDTIRHIPAIAWLPLIV-----------LWLGIGAPAKILVI 152

Query: 458 FGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             + ++ +F N + G      ++ E+A    +T W++ R ++LP   P  +     A G 
Sbjct: 153 AKSVFFPVFLNTVQGIRQVERNYVELAKVLTLTRWQFVRQVVLPAAMPSILVSLRYAAGL 212

Query: 517 AWNASIVSE----VASWGHIHLRTTGL 539
           AW   +V+E    +   G +  R  GL
Sbjct: 213 AWALVVVAEGLSGLEGLGFLIFRAQGL 239


>gi|166710140|ref|ZP_02241347.1| ABC transporter amino acid permease [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 489

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +  L +IPR+L + + +  L  W + W + +P +   +V  +  +
Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418


>gi|326332259|ref|ZP_08198539.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae
           bacterium Broad-1]
 gi|325949965|gb|EGD42025.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae
           bacterium Broad-1]
          Length = 285

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 14/173 (8%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G AW+ IG        Q+ +       ++  R  +  ++ ++I   +G  +G      + 
Sbjct: 73  GTAWELIG----SGQLQEAI------AVSARRAALGFLLGALIAFVLGGIVGLSALGDAL 122

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  Q+L   P     PL +         P ++L  L +    +    N++A       
Sbjct: 123 VDPLVQMLRTLPLFGLVPLFIIWFGIKE-EPKIYLVALFVIVPLY---LNLVAALRGVDP 178

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           D  EVA +  +T     R++ LP + P  + G   A G AW A IV+E  + G
Sbjct: 179 DLAEVAGALRLTWTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVNAG 231



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 96  LGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           LG  LV P++ +++++P+ G +   +++F      K+    L A+F I       +  ++
Sbjct: 118 LGDALVDPLVQMLRTLPLFGLVPLFIIWFGIKEEPKIY---LVALFVIVP-----LYLNL 169

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +  DL EV+ + RL+  ++  +L +P   PGL+  +  ++   W  ++ +E + 
Sbjct: 170 VAALRGVDPDLAEVAGALRLTWTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVN 229

Query: 215 VG 216
            G
Sbjct: 230 AG 231


>gi|294497625|ref|YP_003561325.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           QM B1551]
 gi|294347562|gb|ADE67891.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium QM B1551]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 101/202 (50%), Gaps = 27/202 (13%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T   +L+++ IS++        A++S +   ++ PILD MQ++P   +L   + +
Sbjct: 89  QETMDTLALVLTSVFISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALFF 148

Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           F + + PG +     + IFA+  T ++ N+       +  +P DL E + ++  +  QK 
Sbjct: 149 FGIGVVPGVI----SSVIFAMPPTIRLTNL------GIREVPADLVEAANAYGSTTKQKL 198

Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           + + +P +    M G+  ++M+S+S          M+V+  +++  PG+G+ +  A+   
Sbjct: 199 FKVQLPLATKTIMAGINQSIMLSLS----------MVVIA-SLVGAPGLGAEVYRAVSRL 247

Query: 237 DLLAILYAMLTMLGVIFLYDQL 258
           ++     A ++++ +  + D++
Sbjct: 248 EVGTGFEAGISIVILAIILDRI 269


>gi|17986723|ref|NP_539357.1| glycine betaine/L-proline transport system permease protein proW
           [Brucella melitensis bv. 1 str. 16M]
 gi|225853055|ref|YP_002733288.1| choline ABC transporter permease [Brucella melitensis ATCC 23457]
 gi|254694250|ref|ZP_05156078.1| choline ABC transporter, permease protein [Brucella abortus bv. 3
           str. Tulya]
 gi|256045197|ref|ZP_05448096.1| choline ABC transporter, permease protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256114149|ref|ZP_05454903.1| choline ABC transporter, permease protein [Brucella melitensis bv.
           3 str. Ether]
 gi|256263464|ref|ZP_05465996.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260565203|ref|ZP_05835687.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|261214558|ref|ZP_05928839.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|265991631|ref|ZP_06104188.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265995468|ref|ZP_06108025.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|17982347|gb|AAL51621.1| glycine betaine/l-proline transport system permease protein prow
           [Brucella melitensis bv. 1 str. 16M]
 gi|225641420|gb|ACO01334.1| choline ABC transporter, permease protein [Brucella melitensis ATCC
           23457]
 gi|260151271|gb|EEW86365.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260916165|gb|EEX83026.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|262766581|gb|EEZ12370.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|263002415|gb|EEZ14990.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263093471|gb|EEZ17521.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|326409597|gb|ADZ66662.1| choline ABC transporter permease [Brucella melitensis M28]
 gi|326539301|gb|ADZ87516.1| choline ABC transporter, permease protein [Brucella melitensis
           M5-90]
          Length = 278

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +     S+  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLSISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|84386103|ref|ZP_00989132.1| putative permease of ABC transporter [Vibrio splendidus 12B01]
 gi|84378873|gb|EAP95727.1| putative permease of ABC transporter [Vibrio splendidus 12B01]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  VL PILD+MQ++P   +L  T+V 
Sbjct: 77  QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 136

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +   
Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 187

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 188 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 240

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 241 FEAGLAIVLVAIILDRLCKTP 261


>gi|258513837|ref|YP_003190059.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
 gi|257777542|gb|ACV61436.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
          Length = 277

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   +LSA   +L+ +F    L A+S      ++P+LD+MQ++P   +L   V++F   
Sbjct: 91  ETLALVLSATFFALIISFPIGILTARSGVFHKAVMPVLDLMQTMPPFVYLVPAVIFFQI- 149

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G     IFA+    V  +T      +  +P +L E + +F  +  QK   + +P
Sbjct: 150 --GNVPGLIATIIFAM--PPVIRLT---GLGIRQVPVELIEAAEAFGSTPGQKLVKVQIP 202

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++P ++  +   +      VV + MI  G       G+GS +   I+ 
Sbjct: 203 LALPTIMAGVNQCILLALSMVVIAAMIGAG-------GLGSVVLRGIQR 244


>gi|332967757|gb|EGK06863.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Desmospora sp. 8437]
          Length = 218

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 10/119 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+++ +L       L +++ +   +++ I+ ++Q+ P L  L F +          ++
Sbjct: 27  LIAVLLGILVAIPLGILLSRAPKAAGLVMGIVGVVQTFPSLAILAFFI---------PIL 77

Query: 133 G-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           G   + AI A+F   V  +  + Y  +  + + L E  R   ++GWQ+  Y+ VP +MP
Sbjct: 78  GVGTVPAIVALFLYSVLPILRNTYTGIRGVNQGLLEAGRGMGMTGWQRIRYVEVPLAMP 136


>gi|322391754|ref|ZP_08065219.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
 gi|321145234|gb|EFX40630.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
          Length = 305

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +   ++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    V+P
Sbjct: 230 AIQMVVGNSAVVP 242


>gi|221209305|ref|ZP_03582286.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD1]
 gi|221169993|gb|EEE02459.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD1]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 93  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 149

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 150 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 204

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 205 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 243


>gi|254254558|ref|ZP_04947875.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia dolosa AUO158]
 gi|124899203|gb|EAY71046.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia dolosa AUO158]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|254505697|ref|ZP_05117843.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           16]
 gi|219551350|gb|EED28329.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           16]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 17/190 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVI 132
           +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V F + + PG + 
Sbjct: 102 AATTISVLVGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVLFGLGIVPGLIS 161

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 IFAI  +    +T   Y  +  +P +L E  ++F  +  +  + + +P +MP +
Sbjct: 162 ----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLFKVELPAAMPSI 212

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                  M+G    ++ S  +VV   ++   G+G  +  A+   ++     A L ++ V 
Sbjct: 213 -------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQGFEAGLAIVLVA 265

Query: 253 FLYDQLLFRP 262
            + D+L   P
Sbjct: 266 IILDRLCKSP 275


>gi|170741621|ref|YP_001770276.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168195895|gb|ACA17842.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 251

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 19/155 (12%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +++ +P L ++ F +++F          +  AA+F I     W + F+ + ++  + 
Sbjct: 97  VVRVLRPVPGLAWVPFAIIWFWV--------SPAAALFIIAVGVFWIVYFASHGAIRGVD 148

Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+++F   S  ++   +  P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 149 RDLVEVAQAFGFRSAPERLLKVVWPAATPGVLVGVRTAIGQAWMAVVAAEIFGV------ 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            PG+G  +   ++   LLA    ++ ML +  LY 
Sbjct: 203 -PGLGQRM---MQASTLLATDIVVVYMLTMALLYG 233


>gi|323530093|ref|YP_004232245.1| choline ABC transporter permease [Burkholderia sp. CCGE1001]
 gi|323387095|gb|ADX59185.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1001]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|195940825|ref|ZP_03086207.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. EC4024]
          Length = 283

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
           T      +  +P DL E SRSF  S  Q  + + +P +MP    G+   +M+++S
Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277


>gi|323698733|ref|ZP_08110645.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323458665|gb|EGB14530.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 276

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 27/191 (14%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M LS++VI  +       ++ +S R    L P+LD MQ+ P   +L   V+ F    
Sbjct: 93  TLAMVLSSVVICAVIGIPLGIMSGRSERFEAGLRPVLDAMQTTPAFVYLVPIVMLF---S 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     IFA+    +  +T      +  +  +L E +++F  + WQ    + +P 
Sbjct: 150 VGNVAGVLATIIFAL--PPIIRLT---GLGIRQVHPELVEAAQAFGATRWQVLVKVQIPL 204

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +MP    GL   +MM++S     VV + +I  G       G+GS + L +   D   I  
Sbjct: 205 AMPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVILGLNTLD---IGR 250

Query: 244 AMLTMLGVIFL 254
           A++  LG++ +
Sbjct: 251 AVVGGLGIVLM 261



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 9/164 (5%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           VV GV   +AW+  G  +  F+   +L V +LG      IT+  V+  ++I ++I IP+G
Sbjct: 53  VVIGVVCLLAWKFSGKRLALFSLASMLLVGFLGLWEETMITLAMVLSSVVICAVIGIPLG 112

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I  G      + ++P    +   PA V+    V  V  + +     +   +IF     I 
Sbjct: 113 IMSGRSERFEAGLRPVLDAMQTTPAFVYL---VPIVMLFSVGNVAGVLATIIFALPPIIR 169

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              +      P +  E A +F  T W+    + +P   P  + G
Sbjct: 170 LTGLGIRQVHP-ELVEAAQAFGATRWQVLVKVQIPLAMPTILAG 212


>gi|209520862|ref|ZP_03269604.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209498709|gb|EDZ98822.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 293

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 23/153 (15%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A+++R+ +VL  +LD MQ++P   +L   V+ F     G+V       +FA+    V  
Sbjct: 112 GARNKRVELVLRSLLDFMQTMPAFVYLIPAVILF---GLGRVPAVIATVVFAM-PPVVRL 167

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
            T  + Q    +  +L E  RSF  +  Q  W + +P ++P    G+   +MM++S    
Sbjct: 168 TTLGIRQ----VREELLEAGRSFGSTDLQLLWKIQLPNALPSIMAGVNQTIMMALS---- 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            VV + MI  G       G+G Y+   I+  D+
Sbjct: 220 MVVIASMIGAG-------GLGEYVLSGIQRLDI 245


>gi|126739081|ref|ZP_01754775.1| Glycine betaine/L-proline transport system permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126719698|gb|EBA16406.1| Glycine betaine/L-proline transport system permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 516

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W G +T   ++      SI I IP+G++   RP   + IQP    +   PA VF   +V 
Sbjct: 329 WEGAMTTLALLGTAACLSIVIGIPLGMFAARRPTFYAVIQPIMDFMQTMPAFVF---MVP 385

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++++ +     + + MIFG    +   V+ G    P   +E A SF    W     + L
Sbjct: 386 VIAFFGVGKPAAVIVTMIFGGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDL 444

Query: 500 PGIFPYYVTG 509
           P   P    G
Sbjct: 445 PLASPSIRAG 454


>gi|167031273|ref|YP_001666504.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857761|gb|ABY96168.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI IG+       + P  +     P   + PL+V       L+  L L  L IF   
Sbjct: 103 IPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP- 160

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I      G           A S   T  +  R++ILP   P  +TG     G  W+  
Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTL 218

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T+GLG  +  + +      VVLG+L++     AL 
Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALIAFALE 261


>gi|325288674|ref|YP_004264855.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964075|gb|ADY54854.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 23/159 (14%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P +     L M+SA+V S+        LAAK+ +   ++ P+LD MQ++P   +L   ++
Sbjct: 85  PAFLDTLILVMISALV-SMAVGIPLGILAAKNDKFNWLISPVLDFMQTMPAYVYLIPALL 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178
           +F            +  + A+F + V++M  ++  +   +  +P +L EV  +F     Q
Sbjct: 144 FF-----------GIGKVPAVFATVVFSMPPAIRLTNLGIRQVPVELVEVGEAFGSKPGQ 192

Query: 179 KFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213
               + +P ++P    G+   MM+S+S     VV S MI
Sbjct: 193 LLLKIQLPVALPTIMAGINQTMMLSLS----MVVISSMI 227


>gi|283834315|ref|ZP_06354056.1| taurine uptake ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291069845|gb|EFE07954.1| taurine uptake ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 276

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVGI +G  P I   + P  +L    P   + PL+V        +  + L  L IF   
Sbjct: 100 IPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  + +AG  +        A S   +  +   ++ILPG  P  +TG     G  W+  
Sbjct: 158 --VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTL 215

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC--CFVL-----ALNRFL- 573
           + +E+ +       T GLG  +  + E  +   V+ G+ ++    F+L     AL R L 
Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILELGLRALQRRLT 269

Query: 574 -WH 575
            WH
Sbjct: 270 PWH 272


>gi|229826018|ref|ZP_04452087.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC
           49176]
 gi|229789760|gb|EEP25874.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC
           49176]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L A +I+ +           SR    +  P+ + ++ IP L ++  ++++F       
Sbjct: 76  RVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPMSILWFG------ 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E +  F IF      +T + Y    N+ + L   +R    +  Q F  + +P ++P
Sbjct: 130 -IGDE-SKWFIIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAVP 187

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + ++++ GW  VVA+EMI   +      G+G  I + +   + + I+  ++ +  
Sbjct: 188 YIFAGLQIAITAGWSAVVAAEMIRSDE------GVGWLIVMGMSTGNTIQIMVGIVAIGA 241

Query: 251 VIFLYDQLL 259
           + F+   L+
Sbjct: 242 IGFILATLM 250



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 37/197 (18%), Positives = 82/197 (41%), Gaps = 17/197 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++RV+V  +IA++  + +G+++G+     +  +P  + +   P   + P+  S + +
Sbjct: 71  AISLYRVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPM--SILWF 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              + + W   ++  G+  +I  N   G           A        + +  ++LP   
Sbjct: 129 GIGDESKWF--IIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAV 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL--- 560
           PY   G   A    W+A + +E+           G+G  I      G+  ++++G++   
Sbjct: 187 PYIFAGLQIAITAGWSAVVAAEMIR------SDEGVGWLIVMGMSTGNTIQIMVGIVAIG 240

Query: 561 ----IMCCFVLALNRFL 573
               I+   + AL R L
Sbjct: 241 AIGFILATLMSALERRL 257


>gi|188583387|ref|YP_001926832.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346885|gb|ACB82297.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 283

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A ++ + +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 89  SLARVLSGFLAALVVGVALGLAIGRSRFARDLLWPPLEVLRPIPAVAWIPLAILMFPSSE 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++    ++ +   G  + IL N + G  +        A S         R +ILPG  P 
Sbjct: 149 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGATPS 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++
Sbjct: 205 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 255



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 15/202 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP +   +  R+LS  + +L+          +SR    +L P L++++ IP + ++   
Sbjct: 81  ALPTHLGASLARVLSGFLAALVVGVALGLAIGRSRFARDLLWPPLEVLRPIPAVAWIPLA 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F +        +E++  F  FT  ++ +  +    + ++   L   +RS        
Sbjct: 141 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P +V    + M   WF +V +EMI  G       GIG +   +   Q+  
Sbjct: 193 LREVILPGATPSIVTGAAIGMGTAWFCLVTAEMI-SGQY-----GIGYFTWESYTLQNYD 246

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
            I+  ML ++GV+ +   L+ R
Sbjct: 247 DIVVGML-LIGVLGMGSSLIVR 267


>gi|19224203|gb|AAL86439.1|AF475089_2 transmembrane protein OtaB [Methanosarcina mazei Go1]
          Length = 277

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 14/108 (12%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQS 157
           VL PILD+MQ++P   +L   +++F     G V G     +FA+  T ++ N+       
Sbjct: 126 VLKPILDLMQTMPSFVYLIPALIFF---GLGNVPGMIATLVFAMPPTIRLTNL------G 176

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
           +  +PR+L+EV+ +F  + WQK   + +P ++P    G+   +M+S+S
Sbjct: 177 IRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSLS 224


>gi|253686433|ref|YP_003015623.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251753011|gb|ACT11087.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 15/143 (10%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +P ++P ++ 
Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVLPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248
            +  ++   W        ++V +T+    GIG Y+A+  +E    D++    ILYA+L  
Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236

Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271
           L  I    Q L R  + W+  ++
Sbjct: 237 LADI--SAQGLERIWLRWNPAYQ 257


>gi|299821177|ref|ZP_07053065.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Listeria grayi DSM 20601]
 gi|299816842|gb|EFI84078.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Listeria grayi DSM 20601]
          Length = 255

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +++  QP   ++   P   F   V++ V   HL   + ++ LM+F     I  N+  G  
Sbjct: 85  LTALFQPLVSMMKVTPVASFTMFVLAFVQSSHLP--MIVAFLMVFPV---IYGNMQKGLQ 139

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
                  E+A  F  + W+  R I  P ++P++     T  G AW A I +EV
Sbjct: 140 NVDPALLEMAGIFEFSHWQRLRTIYFPAVYPFFYAAFQTGIGYAWKAGITAEV 192


>gi|92114025|ref|YP_573953.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91797115|gb|ABE59254.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 276

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 21/164 (12%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A  ++++    +   AA S R   +++P+LD MQ++P   +L   + +F           
Sbjct: 101 ATFVAVIIALPFGVFAALSDRFYSLIMPVLDFMQTMPAFVYLIPAIPFF----------- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            + ++ AIF + +++M  ++      +  +P+DL E + +F  +  QK   + +P S+P 
Sbjct: 150 GIGSVSAIFATVIFSMPPAIRFTTLGIRQVPKDLIEAADAFGATRSQKLIKIQLPLSLPT 209

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           ++  +  ++      ++A  M+V+   +I   G+GS +  AI+ 
Sbjct: 210 IMAGINQTI------MLALSMVVIA-AMIGADGLGSEVWRAIQR 246


>gi|107025553|ref|YP_623064.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116693264|ref|YP_838797.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170737468|ref|YP_001778728.1| choline ABC transporter, permease protein [Burkholderia cenocepacia
           MC0-3]
 gi|105894927|gb|ABF78091.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116651264|gb|ABK11904.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169819656|gb|ACA94238.1| choline ABC transporter, permease protein [Burkholderia cenocepacia
           MC0-3]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|125975273|ref|YP_001039183.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256003068|ref|ZP_05428060.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281419262|ref|ZP_06250278.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125715498|gb|ABN53990.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255992759|gb|EEU02849.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281407128|gb|EFB37390.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316939435|gb|ADU73469.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 302

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 11/182 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP  + IG++  +   + P  ++L   P  V+ P  ++ +  +        + ++  G  
Sbjct: 129 IPSALVIGWKKRLYKAVNPLTKVLGPIPPIVYIPYAIAILPTFKAAS----TFIIFIGAF 184

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N + G         + A +  +        +ILP   P  ++GA      ++   
Sbjct: 185 WPVFINTLNGVFNVDKRIIDSAKALSVNEGSMLFQVILPATLPSIISGATVGLVMSFILL 244

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
             +E+         T+GLG Y+   ++   +P V+ G++ +   V  +  FL+  +  Y 
Sbjct: 245 TAAEMIG------ATSGLGWYVKYFSDFADYPRVIAGIIFIGVVVTGVT-FLFDKIERYL 297

Query: 582 TR 583
            R
Sbjct: 298 LR 299


>gi|220903841|ref|YP_002479153.1| phosphate ABC transporter inner membrane subunit PstC
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868140|gb|ACL48475.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 296

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 81  LFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAE 135
           + T VY T  A    RR   V+ P ++++ ++P  +LGFL   V+  F+  Y G   G  
Sbjct: 89  VLTAVYLTEIAHPAVRR---VIKPFVELLAALPSVVLGFLGMVVLAPFLQDYLGAATGLN 145

Query: 136 L--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           L  A++   F S V  +      +L ++PRDL E S +   + WQ    + +P ++ G+ 
Sbjct: 146 LLNASVVLAFMS-VPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVVIPAALSGIG 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +M+ MS      +   M+  G  +IP
Sbjct: 205 TAVMLGMSRAIGETMVVLMVAGGAGIIP 232


>gi|207722426|ref|YP_002252862.1| transmembranee protein [Ralstonia solanacearum MolK2]
 gi|206587605|emb|CAQ18187.1| transmembranee protein [Ralstonia solanacearum MolK2]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+      PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
             RLG   +  L  M   +P +  L   +V+F  L  G ++       F I  S VW ++
Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVS 176

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE
Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263
           ++          G+G YI    + ++LL I      +LT++ +  L + L+FR +
Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|116494444|ref|YP_806178.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116104594|gb|ABJ69736.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus casei ATCC 334]
          Length = 307

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 6/170 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113
           +V +LP       +  LSA++ +         +   SR+ G  +L P+++++  IP  + 
Sbjct: 79  EVGALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVY 138

Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +
Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  + + +  ++PG++  ++  M+  +   +A +M++    ++P
Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247


>gi|289193148|ref|YP_003459089.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
 gi|288939598|gb|ADC70353.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
          Length = 269

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 9/191 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+   ++AS + IP+GI +G+   I+S      +LL   P   + PL    ++++
Sbjct: 75  VSIKRVLGGFLLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAWVPL---SLAWF 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + +  ++  G  + IL N I+G  + P    E A +    G      +++P   P
Sbjct: 132 GLG-EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAKGRDILIKVVIPASSP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+    +      GLG  I  +        V+  ++I+  
Sbjct: 191 SILTGLRVGAGIAWMCVVAAEMLPSSN-----AGLGYLIMYAYSLSRMDVVIACMIIIGL 245

Query: 565 FVLALNRFLWH 575
             L L+R L +
Sbjct: 246 IGLVLDRGLRY 256


>gi|229846444|ref|ZP_04466552.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 7P49H1]
 gi|229810537|gb|EEP46255.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 7P49H1]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T L +   +++  LF  + A L + SR++  +L+PIL I Q+IP+       V++
Sbjct: 52  QHTQVTVLEICLGLLLGFLFGLISALLLSFSRQISALLLPILVISQAIPVFAIAPLLVLW 111

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K++ + L   F +        T + Y  L N P+   +++++F +S  +    
Sbjct: 112 FGYGMASKIVMSVLIIYFPV--------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLK 163

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P     + +++S      VA    VVG+ V    G+G Y+ +    +  + ++
Sbjct: 164 VRLPAALPAFASGLRIAVS------VAPIGTVVGEWVGSSEGLG-YLMIHANARMQVDLM 216

Query: 243 YAMLTMLGVI-----FLYDQLLFRPMIVWS 267
           +A L +L  I     F  D LL R   +WS
Sbjct: 217 FAALLILVAISLCLYFSIDWLLHR--FIWS 244


>gi|148257774|ref|YP_001242359.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409947|gb|ABQ38453.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 269

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     IA+++ + +G+ IG+   I   I+P  Q+L   P   + PL +      +
Sbjct: 72  SLSRVAAGFAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGIAN 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P ++L  L  F   + IL N I G  +   +     +    +  +  RYI++P   P 
Sbjct: 132 -KPAIFLVFLGAF---FPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPS 187

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
              G     G AW  ++ +E+ +
Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+ +V+ P L +++ IP + ++   +++F          A   AIF +F    + +  
Sbjct: 97  SRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGI--------ANKPAIFLVFLGAFFPILL 148

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + +  R+L         S  +   Y+ VP +MP +   + + +   W   V +EM
Sbjct: 149 NTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIGIGSAWMLTVTAEM 208

Query: 213 IVV 215
           + V
Sbjct: 209 VAV 211


>gi|90577630|ref|ZP_01233441.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio angustum S14]
 gi|90440716|gb|EAS65896.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio angustum S14]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       ++A    L  ++ PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P DL E  ++F  S  +   
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEDLIEAGKAFGASRMKLLL 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|284045544|ref|YP_003395884.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949765|gb|ADB52509.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 273

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 27/224 (12%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---QDVLYVIWLGCI------- 385
            NQR++ +L       +  V + + W+  G   +HF      DV   +W G         
Sbjct: 20  DNQRLTGIL----LRTMSIVVLLLVWEWYGSDPDHFATPPPSDVFPAMWDGITSGRLIEA 75

Query: 386 ---TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V   + I+ ++ + +G+ I   P   + I P      A P  +  P V+   +
Sbjct: 76  TLGTLTTVFTGVGISIVLGVALGLAIALFPWARNTIDPLIDAAYAMPVTMLIP-VIGVYT 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  +++ +  +      I+ +   G    P D  E   +F + G   WR ++LP  
Sbjct: 135 GLDFRGRVFIVITYVL---LVIVMSTATGVRDVPRDLMETGRAFGLRGRALWRAVVLPSA 191

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +G  T        ++ +E      + L  + LGA I ES
Sbjct: 192 SSHIASGVATGVARGMRGAVTAE------LLLIASDLGALILES 229


>gi|262374484|ref|ZP_06067758.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
 gi|262310480|gb|EEY91570.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
          Length = 263

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F      K+    +   F I+       
Sbjct: 93  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGIDETAKLFLVAVGVFFPIY------- 145

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++     S+   W      
Sbjct: 146 -INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGFRFSLGLVWV----- 199

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +F   Q+L R ++
Sbjct: 200 -LLIVAETISAQSGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVF--AQILERYLL 255

Query: 265 VWSNKFR 271
            W   ++
Sbjct: 256 RWHAGYQ 262



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 107 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 162

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   + G  W   IV+E  S        +G+G  
Sbjct: 163 GKSYGLSRWQLYKEIILPGAMPSILVGFRFSLGLVWVLLIVAETIS------AQSGIGYM 216

Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578
              + E      V++G+L+          F   L R+L  WH  Y
Sbjct: 217 TMNAREFLQTDIVLVGILLYALLGKLADVFAQILERYLLRWHAGY 261


>gi|152968886|ref|YP_001333995.1| taurine transporter subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262042373|ref|ZP_06015535.1| taurine uptake ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330006842|ref|ZP_08305719.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953735|gb|ABR75765.1| taurine transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|259040281|gb|EEW41390.1| taurine uptake ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328535723|gb|EGF62167.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 275

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +    +ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|117619242|ref|YP_857864.1| glycine betaine/L-proline ABC transporter, permease protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117560649|gb|ABK37597.1| glycine betaine/L-proline ABC transporter, permease protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+++   +L       L A+S RL     P+LD MQ+ P   +L   V+ F     G V 
Sbjct: 172 LTSLFFCVLIGLPVGILLARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLF---GIGNVP 228

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G  +  IFA+       M       +  +P DL E + SF  S  Q  + + +P +MP  
Sbjct: 229 GVVVTVIFALPP-----MIRLTMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTI 283

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +M+++S     VV + MI VG       G+G  +   I   D+
Sbjct: 284 MAGVNQTLMLALS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 322


>gi|322387524|ref|ZP_08061133.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
 gi|321141391|gb|EFX36887.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
          Length = 305

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S +   +L P ++++  IP  + GF+   VV  +   ++ G   G  L+ IF +F   + 
Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILP 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +TF    SL  +PR   E S +   + WQ  W + +  +  G+   ++  M+  +   +
Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229

Query: 209 ASEMIVVGDTVIP 221
           A +M+V    V+P
Sbjct: 230 AIQMVVGNSAVVP 242


>gi|238893295|ref|YP_002918029.1| taurine transporter subunit [Klebsiella pneumoniae NTUH-K2044]
 gi|238545611|dbj|BAH61962.1| taurine transport system permease component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 275

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +    +ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|167042039|gb|ABZ06775.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_141F21]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L +KS R    ++P+LD+MQ+IP   +L   V   M L  GKV G     I+A+    
Sbjct: 122 GVLMSKSDRAEKTILPVLDMMQTIPSFVYL---VPILMLLGIGKVPGLIAVCIYAV--PP 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +T      +  + ++  E   +F  + WQ+   + +P ++P    G+   +MM+++ 
Sbjct: 177 IIRLT---NLGIREVDKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALA- 232

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                     +VV  ++I + G+G  I  AI  Q L   L   L ++ +  ++D++
Sbjct: 233 ----------MVVIASMIGVKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRV 278


>gi|50122424|ref|YP_051591.1| glycine betaine transporter membrane protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612950|emb|CAG76401.1| glycine betaine/L-proline transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 393

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 209 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 263

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 264 TI---LGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 316

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 317 VVIASMIAVG-------GLGQMVLRGIGRLDM 341


>gi|192362106|ref|YP_001982720.1| ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190688271|gb|ACE85949.1| ABC transporter, permease protein [Cellvibrio japonicus Ueda107]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 15/172 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S R+   L+P L++++ IP + ++   ++ F +        +EL+ IF  FT  ++ + 
Sbjct: 96  RSHRVESFLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMIFITFTGALFPIL 147

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  + + L   ++S   S       + +P + P ++  + + M   WF +V +E
Sbjct: 148 LNTIHGVEAVDKRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAE 207

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           MI  G       GIG Y   +   Q+   I+  ML ++GV+ +   LL + +
Sbjct: 208 MI-SGQW-----GIGYYTWESYVIQNYADIVVGML-LIGVLGMGSSLLVKTL 252



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 19/157 (12%)

Query: 411 RPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFN 467
           R H + S + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL N
Sbjct: 96  RSHRVESFLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMIFITFTGALFPILLN 149

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G  A        A S   +     R +ILPG  P  +TG     G +W   + +E+ 
Sbjct: 150 TIHGVEAVDKRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAEMI 209

Query: 528 S--WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           S  W        G+G Y  ES    ++ ++V+G+L++
Sbjct: 210 SGQW--------GIGYYTWESYVIQNYADIVVGMLLI 238


>gi|46202251|ref|ZP_00053506.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 11/119 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   + P L  +++IP + ++   +++F      KVI   +   F I+         
Sbjct: 97  ARRL---IDPTLQALRNIPSIAWVPMFILWFGIFETSKVILIAVGVFFPIY--------L 145

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           S+  ++  + R L EV R FR S  +    + +P ++P  V ++   +  GW FVVA+E
Sbjct: 146 SLSGAILGVDRKLVEVGRIFRFSHAEMITRILLPATLPAYVISLRSGLGLGWMFVVAAE 204


>gi|298291048|ref|YP_003692987.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927559|gb|ADH88368.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 249

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAI A+  +++ N+  +M +    + RDL+E++R +RL   +    + +P  +P    
Sbjct: 118 EAAAITAVAINKIPNVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLVPFFAA 177

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +    ++  W  V+  E++   +      G+G  +  A +  D+  IL   L    V+ L
Sbjct: 178 SARSGLALTWKIVLVVELLGRSN------GVGFELQTAFQLFDVATILAYALAFTAVVQL 231

Query: 255 YDQLLFRPMIVWSNKFR 271
            +  L +P    +N++R
Sbjct: 232 IELGLLQPWERRANRWR 248



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ RV    +IA  I   +GI +G    ++    P+  +L   PA V   +++ C  +
Sbjct: 57  AITLARVAASFLIAMAIGSAIGIALGRSVQLNELFGPWVVVLLNLPALV---VIILCYVW 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L     ++ + I      +   +  GA+A   D  E+A  + +   +  R + LP + 
Sbjct: 114 FGLTEAAAITAVAINKIP-NVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLV 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           P++   A +     W   +V E+        R+ G+G
Sbjct: 173 PFFAASARSGLALTWKIVLVVELLG------RSNGVG 203


>gi|206578569|ref|YP_002240175.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288936921|ref|YP_003440980.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510022|ref|ZP_06549392.1| taurine transporter subunit [Klebsiella sp. 1_1_55]
 gi|206567627|gb|ACI09403.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288891630|gb|ADC59948.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289776738|gb|EFD84736.1| taurine transporter subunit [Klebsiella sp. 1_1_55]
          Length = 275

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +    +ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|206564248|ref|YP_002235011.1| putative glycine-betaine ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198040288|emb|CAR56273.1| putative glycine-betaine binding ABC transporter permease protein
           [Burkholderia cenocepacia J2315]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|78061306|ref|YP_371214.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77969191|gb|ABB10570.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|27381311|ref|NP_772840.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354478|dbj|BAC51465.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A      E+AS F +  WR +R+++LP + PY    A +     W   +V+E+    
Sbjct: 133 GTRALDRSLDEMASVFAMPRWRAFRHVVLPQLAPYIAASARSGLSLVWKIVLVAELLG-- 190

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
               R  G+G  I  + +    P ++   L     VL +   L  P     TR
Sbjct: 191 ----RPNGVGFEIGVAFQLFDTPRLLAYSLTFAAVVLVIETVLVQPFEARATR 239


>gi|167743016|ref|ZP_02415790.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 14]
 gi|254183828|ref|ZP_04890420.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|184214361|gb|EDU11404.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|330809284|ref|YP_004353746.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377392|gb|AEA68742.1| Taurine ABC transporter permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 249

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/229 (18%), Positives = 97/229 (42%), Gaps = 14/229 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+       L   SL Q+   + L  +     +++      T A  S R    + P+ 
Sbjct: 35  PWDVAREALRWLGDRSLLQHLQASVLEEVGGFCAAVIVAIALGTGAGLSSRFRDFISPLN 94

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  +IP + +    ++ F   Y        ++ +  IF + ++ M  ++ + + +I   
Sbjct: 95  SLFMAIPPIAWAPLIMIIFGLGY--------VSIVLVIFIAAMFPMAVTIQEGVQSIRGG 146

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
               +R+   + WQ   ++ +P S+P +   + +  S GW  +VA+EMI          G
Sbjct: 147 EVRAARTLGANAWQLLAHVYLPASLPFVTAALRIGFSQGWRALVAAEMIGASQ------G 200

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           IG  ++   +  +   +L  ++ +  + +L +  +FR +     K+R++
Sbjct: 201 IGWMVSTGGQIGNSSQVLLGIVVIGLIAWLMESFVFRRIERHYQKWRVQ 249


>gi|260771576|ref|ZP_05880496.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio metschnikovii CIP 69.14]
 gi|260613353|gb|EEX38552.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio metschnikovii CIP 69.14]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 89  QEMLETFVLVFAATTISVLIGVPIGIMAAHRAWLYTLLRPILDLMQTVPTFVYLIPTLVL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEELLEAGKAFGASKMKLLF 199

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P ++P    G+   +M+S+S
Sbjct: 200 KVELPAALPSIMAGITQCIMLSLS 223


>gi|238023929|ref|YP_002908161.1| choline ABC transporter membrane-spanning permease [Burkholderia
           glumae BGR1]
 gi|237878594|gb|ACR30926.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia glumae BGR1]
          Length = 297

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGVWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|145294562|ref|YP_001137383.1| hypothetical protein cgR_0513 [Corynebacterium glutamicum R]
 gi|140844482|dbj|BAF53481.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 267

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 17/172 (9%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P L  + +IP +      +V+F   +  KV  A   A F         +  + +  L 
Sbjct: 107 LYPALVAIDTIPKVALAPLFIVWFGFGFESKVFVAMAIAFFP--------LVINTFDGLS 158

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++P +L+E++R  R + WQ+   +   +++P +   M +S+S      +A    VVG+ +
Sbjct: 159 SVPHELKELARINRATTWQRLSKIEFIYAVPSIFSGMKISIS------LAVGGAVVGEFI 212

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLFRPMIVWSN 268
               G+G  I LA  + DL ++  A + +  +   +F    L  + ++ W  
Sbjct: 213 SGSKGLGYVILLANSQVDLASMFAAFIVLASISLALFYAVDLAAKRLVPWKT 264


>gi|113868219|ref|YP_726708.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526995|emb|CAJ93340.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 267

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +      E+
Sbjct: 110 QMVRNIPALALIPLVIL---WFGIDETAKL-FLVSLGVFFPVYLNTYHGIRSVDTGLVEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GW+ +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCC-------FVLALNRF--LWHPLY 578
              + E      V++G+L+              L R+   WHP Y
Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 15/142 (10%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    +L   L ++++IP L  +   +++F      K+    L   F ++         +
Sbjct: 99  RTAATLLDSSLQMVRNIPALALIPLVILWFGIDETAKLFLVSLGVFFPVY--------LN 150

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  + ++   L E++RS+ LSGWQ +  + +P ++PG++  +  ++   W       ++
Sbjct: 151 TYHGIRSVDTGLVEMARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWV------VL 204

Query: 214 VVGDTVIPLPGIGSYIALAIKE 235
           +V +T+    GIG Y+ +  +E
Sbjct: 205 IVAETISAQSGIG-YMTMNARE 225


>gi|90418107|ref|ZP_01226019.1| permease protein, ABC-type proline/glycine betaine transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337779|gb|EAS51430.1| permease protein, ABC-type proline/glycine betaine transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 98/201 (48%), Gaps = 31/201 (15%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS +V+  L + +         ++S ++  V+ PILD+MQ++P   +L   V+ 
Sbjct: 98  EDTMRTLSIIVVCTLMSIIIGMPIGIIMSRSNKVQAVINPILDVMQTMPSFVYLIPIVML 157

Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             + L PG ++      I+A+    ++ N+   +      + +++ E + +F  SGWQK 
Sbjct: 158 LGIGLIPGLLV----VVIYAMPPIIRLTNLGIRL------VDKEVLEAANAFGSSGWQKL 207

Query: 181 WYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
             + +P ++P    G+   +MM+++          M+VV  ++I + G+G  +  AI  Q
Sbjct: 208 TQVQLPLALPTIMAGINQTIMMALA----------MVVVA-SLIGVRGLGQPVLQAITNQ 256

Query: 237 DLLAILYAMLTMLGVIFLYDQ 257
                +   L ++ +  ++D+
Sbjct: 257 YFTQGVLNGLAIVAIAIIFDR 277


>gi|148976132|ref|ZP_01812875.1| putative permease [Vibrionales bacterium SWAT-3]
 gi|145964527|gb|EDK29781.1| putative permease [Vibrionales bacterium SWAT-3]
          Length = 299

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLS----AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS      ++S+          A+S R   ++ P+LDIMQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTLVSIFLGIPIGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + +F  S  Q+ W
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASKKQRLW 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|53717242|ref|YP_105326.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Burkholderia mallei ATCC 23344]
 gi|53722452|ref|YP_111437.1| glycine-betaine binding ABC transporter permease protein
           [Burkholderia pseudomallei K96243]
 gi|76817460|ref|YP_335608.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|124381826|ref|YP_001024716.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126444044|ref|YP_001063021.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|126447053|ref|YP_001079051.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|126457380|ref|YP_001075966.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|134282424|ref|ZP_01769128.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167724046|ref|ZP_02407282.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei DM98]
 gi|167820188|ref|ZP_02451868.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 91]
 gi|167828563|ref|ZP_02460034.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 9]
 gi|167850021|ref|ZP_02475529.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei B7210]
 gi|167898630|ref|ZP_02486031.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 7894]
 gi|167906971|ref|ZP_02494176.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167915330|ref|ZP_02502421.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 112]
 gi|167923164|ref|ZP_02510255.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
 gi|217425333|ref|ZP_03456827.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|226199143|ref|ZP_03794705.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237509601|ref|ZP_04522316.1| choline ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242313507|ref|ZP_04812524.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254174383|ref|ZP_04881045.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|254186743|ref|ZP_04893259.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194352|ref|ZP_04900784.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|254204020|ref|ZP_04910379.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254208998|ref|ZP_04915345.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254262955|ref|ZP_04953820.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254355725|ref|ZP_04972005.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|52212866|emb|CAH38900.1| putative glycine-betaine binding ABC transporter permease protein
           [Burkholderia pseudomallei K96243]
 gi|52423212|gb|AAU46782.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Burkholderia mallei ATCC 23344]
 gi|76581933|gb|ABA51407.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|124289846|gb|ABM99115.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126223535|gb|ABN87040.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126231148|gb|ABN94561.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|126239907|gb|ABO03019.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|134245981|gb|EBA46071.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|147744904|gb|EDK51985.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147750221|gb|EDK57291.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148023818|gb|EDK82880.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|157934427|gb|EDO90097.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160695429|gb|EDP85399.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|169651103|gb|EDS83796.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|217391584|gb|EEC31612.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|225928918|gb|EEH24943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|235001806|gb|EEP51230.1| choline ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242136746|gb|EES23149.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254213957|gb|EET03342.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLTSL-----GIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|209516849|ref|ZP_03265699.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502665|gb|EEA02671.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 288

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+  +L P    +++IP L ++   +++       K+    L AI A F  Q      
Sbjct: 115 SRRVDALLDPAFQALRAIPSLAWVPILLLWMGIDEAPKIT---LIAIGAFFPVQ-----L 166

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S+   +  + R L E  +  RLSG   F  + +P SMP +   +   +S  W F+VA+E+
Sbjct: 167 SVVAGIHGVDRKLIEFGQLNRLSGRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAEL 226

Query: 213 IVV 215
           I  
Sbjct: 227 IAA 229


>gi|332974746|gb|EGK11662.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Desmospora sp. 8437]
          Length = 569

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 29/169 (17%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+A ++S++       L A++R    ++ P+LD MQ++P   +L   V +F        
Sbjct: 97  VLTATLLSIVIGLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFA------- 149

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR---DLEEVSRSFRLSGWQKFWYLGVPFS 188
               L A+  I  S +++M  ++  +   I +   DL E + +F  +  QK + + +P +
Sbjct: 150 ----LGAVPGIIASIIFSMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLA 205

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            P    G+   +M+S+S     VV + MI  G       G+G+ +  AI
Sbjct: 206 KPTIMAGINQTIMLSLS----MVVIASMIGAG-------GLGTVVLQAI 243


>gi|325519398|gb|EGC98803.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 172

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAG 471
           +   + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL N + G
Sbjct: 5   LEDTLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPILLNTVHG 58

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A A        A S    G   +  +ILPG  P   TG     G AW   + +E+ +  +
Sbjct: 59  AEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMIAGQY 118

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                 G+G +  ES    ++P++V+G+ ++
Sbjct: 119 ------GIGYFTWESYTLQNYPDIVVGMALI 143



 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F +        +EL+ +F  F   ++ + 
Sbjct: 1   RYRALEDTLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPIL 52

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 53  LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 112

Query: 212 MIV 214
           MI 
Sbjct: 113 MIA 115


>gi|255261600|ref|ZP_05340942.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62]
 gi|255103935|gb|EET46609.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62]
          Length = 420

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV     ++I IP+G  +G          P  + +   P     PLV+    ++ 
Sbjct: 229 SLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVII---WFG 285

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +  +  + +L+     W +     +G S         A S   + W+  R++I+P   P 
Sbjct: 286 IGESGKI-ILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQLMRHVIIPNSLPE 344

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +       + G G  I  + +  +   V++G++++   
Sbjct: 345 IFTGARVAMGVCWGTVVAAELVA------ASQGAGMMIMTAAKFQNTDIVIMGIILIGVI 398

Query: 566 VLALNRFL 573
              ++  +
Sbjct: 399 GFGIDMLM 406



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK+I         +F + +W M  +    +  +
Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFGIGESGKII--------LLFLAALWIMAIAARSGVSGV 314

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++        
Sbjct: 315 NISKVHAAYSLGASKWQLMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAASQ---- 370

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269
             G G  I  A K Q+   ++  ++ ++GVI F  D L+    R ++ W  K
Sbjct: 371 --GAGMMIMTAAKFQNTDIVIMGII-LIGVIGFGIDMLMRYAERLLVPWKGK 419


>gi|170734695|ref|YP_001773809.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820733|gb|ACA95314.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +L  F   +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  S+Y     +P  L+   R++ L+G ++   + VP ++P
Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|323488606|ref|ZP_08093850.1| binding-protein-dependent transport systems inner membrane
           component [Planococcus donghaensis MPA1U2]
 gi|323397823|gb|EGA90625.1| binding-protein-dependent transport systems inner membrane
           component [Planococcus donghaensis MPA1U2]
          Length = 251

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++ +  A +I   VGI +         +      L + P+ V+ PL    + ++ L  
Sbjct: 61  RLLIGLAAAILIGTSVGILLARSKTADDTLGTLVLALQSVPSIVWLPL---AMMWFGLGE 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  ++I G  + ++ NV  G       F + A +    G   +  +I+P   PY+VT
Sbjct: 118 GS-IIFVVILGGTFVMILNVRTGIKNVDPLFIKAARTMGSNGMDLFIKVIIPASVPYFVT 176

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           GA  A   AW A +  E+ S G       GLG  +  +++ G+   +V+GV+I+   V A
Sbjct: 177 GARLAWAFAWRALMAGELLSSGP------GLGYTLRYASDFGNM-SLVIGVMIIIGVVGA 229

Query: 569 L 569
           +
Sbjct: 230 I 230


>gi|227358548|ref|ZP_03842873.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|227161259|gb|EEI46333.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 409

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 25/169 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 223 AHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 277

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 278 TI---LGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 330

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253
           VV + MI VG       G+G  +   I   D  L A+  A + +L +I 
Sbjct: 331 VVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIIL 372


>gi|238783149|ref|ZP_04627175.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC
           43970]
 gi|238715945|gb|EEQ07931.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC
           43970]
          Length = 255

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ +  A  + +P GI +G    + + + P  ++    P   + PL+V       
Sbjct: 63  SLGRILIALFAAVALGVPTGIAMGLSRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIGE 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +    +AG  +        A +   + W+  R+++LP   P 
Sbjct: 123 TS-KILLIYLAIFAP---VTLAAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSALPE 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 179 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAII 232

Query: 566 VLALN 570
              + 
Sbjct: 233 AFGME 237



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+  VL P+++I + +P L +L   V++F        IG E + I  I+ +    +T 
Sbjct: 88  SRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTL 139

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    + ++       +++   S WQ   ++ +P ++P ++  + + +  GW  +VA+E+
Sbjct: 140 AAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAEL 199

Query: 213 I 213
           I
Sbjct: 200 I 200


>gi|28900965|ref|NP_800620.1| putative permease [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836719|ref|ZP_01989386.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|260366177|ref|ZP_05778637.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           K5030]
 gi|260879819|ref|ZP_05892174.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AN-5034]
 gi|260894493|ref|ZP_05902989.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28809411|dbj|BAC62453.1| putative permease of ABC transporter [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149750068|gb|EDM60813.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|308086416|gb|EFO36111.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308092739|gb|EFO42434.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308114846|gb|EFO52386.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           K5030]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275


>gi|222086916|ref|YP_002545450.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221724364|gb|ACM27520.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +  AG  A P D+   A SF     +  R++ILPG  P  +TG   A G  W+  + 
Sbjct: 162 IILSTAAGVKAAPVDYVNAARSFGAGRLQVLRHVILPGAIPSILTGIRIALGAGWSTLVA 221

Query: 524 SEV--ASWG 530
           +E+  AS G
Sbjct: 222 AELVAASQG 230


>gi|134292188|ref|YP_001115924.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134135345|gb|ABO56459.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +   L P+LD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVAATLRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|197284311|ref|YP_002150183.1| glycine betaine transporter membrane protein [Proteus mirabilis
           HI4320]
 gi|194681798|emb|CAR41030.1| glycine betaine/L-proline ABC transporter, permease protein
           [Proteus mirabilis HI4320]
          Length = 409

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 25/169 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 223 AHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 277

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E ++SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 278 TI---LGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 330

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253
           VV + MI VG       G+G  +   I   D  L A+  A + +L +I 
Sbjct: 331 VVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIIL 372


>gi|183598093|ref|ZP_02959586.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827]
 gi|188020250|gb|EDU58290.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827]
          Length = 392

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S +   ++ PILD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 206 ARSDKAASIVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 260

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 261 TI---LGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 313

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 314 VVIASMIAVG-------GLGQMVLRGIGRLDM 338


>gi|86137727|ref|ZP_01056303.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85825319|gb|EAQ45518.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 683

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI D++Q+IP+  FL   ++ F        IG E +A  AI    V  M     Q L + 
Sbjct: 528 PICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAIIAYAVVPMIRYTRQGLIST 579

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P D+ E + +   +GWQ    +  P++ P ++  +  ++      + A  M+V+   +I 
Sbjct: 580 PDDMIEAATASGATGWQMMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 632

Query: 222 LPGIGSYIALAIKEQDL 238
             G+G  I LA+ + D+
Sbjct: 633 TTGLGQSIYLALGKADV 649


>gi|317491340|ref|ZP_07949776.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920887|gb|EFV42210.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 368

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 183 ARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 237

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 238 TSLGIQ---QVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 290

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 291 VVIASMIAVG-------GLGQMVLRGIGRLDM 315


>gi|90422375|ref|YP_530745.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90104389|gb|ABD86426.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 291

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            NV  G  A P D  ++  SF  + W+  RY+ILP I PY      +  G A    I +E
Sbjct: 173 LNVYEGVRALPKDLVDMIESFRPSRWQVLRYLILPHIVPYIFLTTKSVIGYAIRMVIFAE 232

Query: 526 VASWGHIHLRTTGLGAY--IAEST 547
           + +         G+GA   +A+ST
Sbjct: 233 LVA------SAVGIGARMNLAQST 250


>gi|150398343|ref|YP_001328810.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029858|gb|ABR61975.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 263

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 14/173 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A +R +   L P+L   QSI  + ++   +++F  +  G V+       F I  +  +  
Sbjct: 93  ALNRAVSETLTPVLSFFQSIAGIAWVPLAIIWF-GVGKGSVL-------FVIANTIFFAS 144

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
            +S    +  IPR L   S S   S W     + +P +M  ++  +  SM+ GW  +VA 
Sbjct: 145 IYSTVIGVRTIPRVLFRASLSHGASRWDIISNVVIPGAMVQILVGLRTSMAYGWRALVAG 204

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           EMI   D      G+G     A++      ++  M+ +  +  L D LLF P+
Sbjct: 205 EMIAGTD------GVGYMTLEAVQWYQAEIVILGMIVIGVLWLLMDALLFTPI 251


>gi|325526331|gb|EGD03937.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. TJI49]
          Length = 269

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 165 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  + R    WHP Y  G + 
Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 269


>gi|312961054|ref|ZP_07775559.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284712|gb|EFQ63288.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 282

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L P+LD+MQ++P   +L  T+  F + + PG +       +FAI  +    +T   Y  +
Sbjct: 127 LRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGI 177

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214
           C++P +L +  ++F  S  Q    + +P +MP    G+   +M+S+S          M+V
Sbjct: 178 CDVPEELMDAGKAFGCSRRQLLARIELPHAMPSIAAGITQCIMLSLS----------MVV 227

Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238
           +   ++   G+G  +  A+   D+
Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250


>gi|260903030|ref|ZP_05911425.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308108320|gb|EFO45860.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ4037]
          Length = 280

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275


>gi|91776210|ref|YP_545966.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91710197|gb|ABE50125.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 321

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S++ +P+GI  G          PF +     PA  F  L V+ +  Y   P + + +
Sbjct: 136 LISSLVGVPLGILAGTWSVAGRLCLPFIEFFRYLPAPAFGALAVAVLGIYE-GPKIAIIV 194

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +  F  Q  I+ N             E A +   + W+  R++++PG+ P          
Sbjct: 195 IGTFFQQVLIISNT---TRQLDYALLEAAMTLGTSRWKLLRHVVIPGVLPQLYRDQRILL 251

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G AW   IV+E+         ++G+  +I +      F  V   + I+    L+ +  L
Sbjct: 252 GWAWTYLIVAELIG------TSSGITWFITQQARYEHFDNVYAAIFIIGVIGLSTDMLL 304


>gi|330501438|ref|YP_004378307.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328915724|gb|AEB56555.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 292

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S+ +ISLL        AA+S R+  ++ PILD MQ++P   +L    + F     G+V G
Sbjct: 98  SSTLISLLLGIPLGIWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLF---GLGRVPG 154

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190
                IFA+    V   +  + Q    + +++ E  +SF  +  Q  + + +P +MP   
Sbjct: 155 IIATVIFAM-PPAVRLTSLGIRQ----VNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIM 209

Query: 191 -GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 210 AGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 247


>gi|330819748|ref|YP_004348610.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia gladioli BSR3]
 gi|327371743|gb|AEA63098.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia gladioli BSR3]
          Length = 297

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLVLGIPLGIWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|83745558|ref|ZP_00942616.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207738911|ref|YP_002257304.1| transmembranee protein [Ralstonia solanacearum IPO1609]
 gi|83727635|gb|EAP74755.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206592282|emb|CAQ59188.1| transmembranee protein [Ralstonia solanacearum IPO1609]
          Length = 298

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+      PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
             RLG   +  L  M   +P +  L   +V+F  L  G ++       F I  S VW ++
Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVS 176

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE
Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263
           ++          G+G YI    + ++LL I      +LT++ +  L + L+FR +
Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|107022795|ref|YP_621122.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686966|ref|YP_840213.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105892984|gb|ABF76149.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652681|gb|ABK13320.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +L  F   +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  S+Y     +P  L+   R++ L+G ++   + VP ++P
Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|23098455|ref|NP_691921.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776681|dbj|BAC12956.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 276

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 23/200 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +T   ++ A ++SL+       L+A +  +  ++ PILD MQ++P   +L   V+ 
Sbjct: 88  EGAMQTLAIIIVATLVSLVIGIPVGILSAMNDGVQRIVRPILDFMQTLPSFVYLIPAVLL 147

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        +G  + A+ A F              + ++P+++ E SR+F  +  Q  + 
Sbjct: 148 FG-------LGG-VPAVMATFIFAAPPAVRMTNLGIRSVPKEIVEASRAFGSTNKQLLYK 199

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + +P ++P    G+   +M+S+S     VVAS        +I  PG+G+ +  AI + ++
Sbjct: 200 VQIPLAIPSIMAGVNQTIMLSLS---MAVVAS--------MIGAPGLGASVLTAISQVNI 248

Query: 239 LAILYAMLTMLGVIFLYDQL 258
              L A L ++ +  + D++
Sbjct: 249 GLGLVAGLGIVVLAIVLDRI 268


>gi|86146033|ref|ZP_01064360.1| putative permease [Vibrio sp. MED222]
 gi|85836238|gb|EAQ54369.1| putative permease [Vibrio sp. MED222]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 25/151 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R   ++ P+LDIMQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNRAQSIVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+ W + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+V+  ++I + G+G  +  +I  Q
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|107028482|ref|YP_625577.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686477|ref|YP_839724.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105897646|gb|ABF80604.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652192|gb|ABK12831.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 238

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  +IP L  L   +  F        IG  + AI A+F + +  +T + Y+ + N+P
Sbjct: 82  VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E ++   ++GWQ    + +P ++P +V  +  +++
Sbjct: 134 AALREAAKGIGMTGWQSLLRVELPNALPIIVGGVRTALA 172


>gi|330956993|gb|EGH57253.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ PILD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAHKPMFYTIIRPILDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|118593747|ref|ZP_01551116.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118433657|gb|EAV40320.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 283

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TLR+ L    +S + +   A   AKSR L     P+L ++QS+P++      +V      
Sbjct: 89  TLRVALIGYAVSFVISLPIAVGLAKSRLLSGAFYPLLVVIQSVPVVAVAPIIIV------ 142

Query: 128 PGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              V+G  +   +   F    + +  SM   L   P +L E+SRS R   +++   + +P
Sbjct: 143 ---VLGTGDAPRVVITFMISFFPLVVSMTTGLAATPPELIELSRSLRAPSFREITQIRLP 199

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KEQDLLAILY 243
           ++ P +   M +S++      V SE +          GIG +I  +    K     A L 
Sbjct: 200 YATPYIFSGMKISITLSVIGAVVSEFVAAEK------GIGYFIQFSTSMFKLPQAWAGLV 253

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS 267
            ++ M  V+F    LL R    WS
Sbjct: 254 ILVIMSLVLFQLVSLLQRVFFPWS 277


>gi|159897592|ref|YP_001543839.1| ornithine carbamoyltransferase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890631|gb|ABX03711.1| Ornithine carbamoyltransferase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 293

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 12/108 (11%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA-AIFAIFTSQV-WNMTFSMY- 155
           V++P  D++ ++ +LGF T     F  L     IG  LA  ++ +  S V +N++F    
Sbjct: 130 VIIP--DVVMAVSLLGFFTLAFRQFQAL-----IGLNLAMGLWTVIISHVAFNISFVTVV 182

Query: 156 --QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              SL N  R LEE +     + WQ FW +  P   PG++   ++S +
Sbjct: 183 VGTSLANFDRRLEEAAADLGATPWQTFWRIKFPLIGPGVLGGALLSFT 230


>gi|289672390|ref|ZP_06493280.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|302188551|ref|ZP_07265224.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. syringae 642]
 gi|330898813|gb|EGH30232.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330938581|gb|EGH42155.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330979968|gb|EGH78238.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ PILD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPILDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|191637829|ref|YP_001986995.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|227535592|ref|ZP_03965641.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239631193|ref|ZP_04674224.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065954|ref|YP_003787977.1| phosphate ABC transporter permease [Lactobacillus casei str. Zhang]
 gi|190712131|emb|CAQ66137.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|227186722|gb|EEI66789.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239525658|gb|EEQ64659.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300438361|gb|ADK18127.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei str. Zhang]
 gi|327381895|gb|AEA53371.1| Phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus casei LC2W]
 gi|327385056|gb|AEA56530.1| Phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus casei BD-II]
          Length = 307

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 6/170 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113
           +V +LP       +  LSA++ +         +   SR+ G  +L P+++++  IP  + 
Sbjct: 79  EVGALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVY 138

Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +
Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  + + +  ++PG++  ++  M+  +   +A +M++    ++P
Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247


>gi|111017295|ref|YP_700267.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110816825|gb|ABG92109.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 287

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R+++   + + I + +G  +G        +    Q+L A P     PL+++    
Sbjct: 89  TVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRTLQMLRALPHLALVPLLIAAFGI 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L   + ++L +IF     +  N +AG         ++  S+ +      R II+PG  
Sbjct: 149 GELPKVVLVTLGVIF----PVYLNTVAGIRTVDPKLVQLGESYGLGRGARIRDIIVPGAM 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G AW   +++E  +       + G+G       +      +VL +L+  
Sbjct: 205 PMILTGIRYALGVAWLTLVIAETIAT------SEGIGFLAQNGRDMLRNDRIVLAILLYA 258

Query: 564 CFVLALNR---------FLWHPLYLYGTR 583
              L  ++           W+P Y  G R
Sbjct: 259 VAGLLADQITRLIEARVLRWNPHYQGGNR 287


>gi|319793147|ref|YP_004154787.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315595610|gb|ADU36676.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 268

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +   +A+I  + +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 73  SLRRVFIGFGLAAIAGVALGLAIGRARWAEDTLLPPLEVLRPIPAVAWIPLAI------L 126

Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPG 501
           + P+   S++ I   G  + +L N + G  A   D + VAS+  +   R   +R +ILPG
Sbjct: 127 MFPSSEASMVFITFIGALFPVLLNTVHGVEAV--DARLVASARSLGAGRLAVFREVILPG 184

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             P  VTG     G AW   + +E+ S G       G+G Y   S    ++ ++V+G+L
Sbjct: 185 ALPSVVTGLAIGMGTAWFCLVTAEMIS-GQF-----GIGYYTWMSYTIQNYADIVVGML 237



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 31/230 (13%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA-------- 91
           Q    PR++ +         SL Q  S   L+ LSA +  +   F  A +A         
Sbjct: 45  QNVPPPREVAE------SAWSLVQ--SPLVLQHLSASLRRVFIGFGLAAIAGVALGLAIG 96

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           ++R     L+P L++++ IP + ++   ++ F +        +E + +F  F   ++ + 
Sbjct: 97  RARWAEDTLLPPLEVLRPIPAVAWIPLAILMFPS--------SEASMVFITFIGALFPVL 148

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   +RS        F  + +P ++P +V  + + M   WF +V +E
Sbjct: 149 LNTVHGVEAVDARLVASARSLGAGRLAVFREVILPGALPSVVTGLAIGMGTAWFCLVTAE 208

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI  G       GIG Y  ++   Q+   I+  ML  +GV+ +    L R
Sbjct: 209 MI-SGQF-----GIGYYTWMSYTIQNYADIVVGML-FIGVLGMGSSALVR 251


>gi|300698177|ref|YP_003748838.1| ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299074901|emb|CBJ54470.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 298

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+      PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
             RLG   +  L  M   +P +  L   +V+F  L  G ++       F I  S VW ++
Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGSGSLV-------FVIVHSVVWAVS 176

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE
Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263
           ++          G+G YI    + ++LL I      +LT++ +  L + L+FR +
Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|333023680|ref|ZP_08451744.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332743532|gb|EGJ73973.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 241

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + + +T   +L  IW    ++ R +   ++A +I  P+G+ +     + + I P    
Sbjct: 24  GELSDAWTQGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 80

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P     V +  LN ++  +++++ G    I   +++G    P  +     
Sbjct: 81  LQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 136

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543
           +   TG R   +I+LP   P Y+ G       +W + + +E +AS   + +   GLG  +
Sbjct: 137 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 193

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  S   V L + ++    +A++  ++ PL     R LR
Sbjct: 194 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 233


>gi|311108941|ref|YP_003981794.1| binding-protein-dependent transporter inner membrane component
           family protein 65 [Achromobacter xylosoxidans A8]
 gi|310763630|gb|ADP19079.1| binding-protein-dependent transport system inner membrane component
           family protein 65 [Achromobacter xylosoxidans A8]
          Length = 256

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 20/203 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  ++  T++  L   ++S+        +   SR L   ++P+L + Q+ P +   
Sbjct: 46  DSAFLGHHSWVTSVETLGGFLLSIAVGIPLGIVLVWSRPLERAIMPLLVVSQAFPKVAVA 105

Query: 117 TFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              +++F + L+P K++ A   A F I  S V  M         ++  DL +++RS R  
Sbjct: 106 PLIIIWFGLGLFP-KILIAFSVAFFPIVVSTVAGMR--------SVDADLNDLARSMRAG 156

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P+++P +   + ++++       A+   VVG+ V    G+G  +  A   
Sbjct: 157 ALRTFLRIRLPYALPQIFSGLKVAIA------FATVGAVVGEWVGAESGLGYVLLSANAN 210

Query: 236 QD---LLAILYAMLTMLGVIFLY 255
            D   L A+L A++ ++G++F Y
Sbjct: 211 LDTTLLFAVLVALM-LIGLVFYY 232


>gi|295695572|ref|YP_003588810.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295411174|gb|ADG05666.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 304

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 24/184 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++RV++   +A+++ +P+GI +G    I + ++P        PA+ F PL++       
Sbjct: 115 TVWRVLLGFALAAVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAFIPLLI------- 167

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       ++  G+ + ++  V         +  E A +         R+++
Sbjct: 168 ----LWVGIGDAEKVSVIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFVVRHVV 223

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P  FP          G AW   IV+E+ +        +G+G  I +S       +++ G
Sbjct: 224 IPAAFPEIYDTLRLVLGWAWTYVIVAELVA------AKSGIGYVILQSQRMLQTADIIFG 277

Query: 559 VLIM 562
           ++++
Sbjct: 278 IVVI 281


>gi|282898027|ref|ZP_06306022.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9]
 gi|281197171|gb|EFA72072.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9]
          Length = 241

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   +R L   + PI  ++++IP L +L  ++  F    P        +AIF IF + +W
Sbjct: 111 LIGANRFLYNAVDPIFQVLRTIPPLAWLPISLAAFQQANP--------SAIFVIFITSIW 162

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            +  +    + NIP+D   V+R  RL   + F  +  P
Sbjct: 163 PILINTTVGVQNIPQDYVNVARVLRLRQGKYFLKISFP 200



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV +   +A+I+ I +GI IG    + + + P  Q+L   P   + P  +S 
Sbjct: 85  WQILTSLGRVGLGFSLATIVGIFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLP--ISL 142

Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++   NP+   ++ +IF T  W IL N   G    P D+  VA    +   +++  I  
Sbjct: 143 AAFQQANPS---AIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQGKYFLKISF 199

Query: 500 P 500
           P
Sbjct: 200 P 200


>gi|197295267|ref|YP_002153808.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944746|emb|CAR57350.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +L  F   +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  S+Y     +P  L+   R++ L+G ++   + VP ++P
Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|159043985|ref|YP_001532779.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911745|gb|ABV93178.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 513

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   RP   + IQP    +   PA VF   +V  ++++ +     + + MIF
Sbjct: 345 VIGIPLGMFAARRPRFYAFIQPIMDFMQTMPAFVF---MVPVIAFFGVGKPAAVIVTMIF 401

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF    W     + LP   P    G
Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAG 451


>gi|254250602|ref|ZP_04943921.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124879736|gb|EAY67092.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L    + +L  F   +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  S+Y     +P  L+   R++ L+G ++   + VP ++P
Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235


>gi|254469776|ref|ZP_05083181.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211961611|gb|EEA96806.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 668

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 15/175 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            V   LA KS     +L PILD+MQ++PI  +L   +++     P       ++A+FA  
Sbjct: 176 LVLGILAYKSAGFERLLRPILDLMQTVPIFAYLV-PILFLFGFGP-------VSALFATI 227

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  M   +  +L ++P  L E  +    +  Q  W + +P ++P L       M G 
Sbjct: 228 IYAMPPMVRVVLVALQSVPTQLHEAGQMAGCTSRQMMWKVLLPSALPTL-------MVGV 280

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              ++ S  +V+  ++I   G+G  +  A++  D+   + A L ++ +    D+L
Sbjct: 281 NQVIMLSLNMVIIASIIGAGGLGYDVLAALRRLDIGGGIEAGLAIVVIAIALDRL 335


>gi|189467051|ref|ZP_03015836.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM
           17393]
 gi|189435315|gb|EDV04300.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM
           17393]
          Length = 394

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)

Query: 75  AMVISLLFTF---VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127
           A++I+L F     +Y +  A SR +  +L PI++++  IP  + GF    V+  +   ++
Sbjct: 185 AILIALPFGLSVAIYMSEVANSR-IRNLLKPIIELLSGIPSVVYGFFGLIVIVPFIQKVF 243

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V  + LA    +    +  +      ++ N PR + E S +   S WQ  + + +P+
Sbjct: 244 NLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPY 303

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAI 241
           S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E      
Sbjct: 304 SVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGA 363

Query: 242 LYAMLTMLGVIFLYDQLL 259
            Y  L +LGV+  +  LL
Sbjct: 364 HYEALFLLGVVLFFISLL 381


>gi|251799062|ref|YP_003013793.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546688|gb|ACT03707.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 259

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV     + S++ IP+G+ IG    I    +PF   +   P   F  L    + ++
Sbjct: 59  ISFYRVFAGWALGSLLAIPIGLTIGKVTAIRVFAEPFLNFVRFIPPIAFITL---FLVWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++L+M + T + ++ N + G  A   D    A S   + W+   ++++P   P
Sbjct: 116 GIGEQSKIALIM-YATLFIVIINTLTGVLAIEEDRIRSARSMGASEWQILLHVVIPATTP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG   A G ++ A I +E+
Sbjct: 175 YIFTGIRLAMGTSYMAIIGAEM 196


>gi|156933297|ref|YP_001437213.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531551|gb|ABU76377.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894]
          Length = 377

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 14/98 (14%)

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           G+++ P+  + Q+ P LG L    V    L P         A+ A+    +  +   +  
Sbjct: 221 GLLMAPLAGLAQAFPALGALG---VSGTGLAP---------ALIALTLYALLPLVRGVVA 268

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  +P  + E +R   +S WQ+ W++ VP ++P  VW
Sbjct: 269 GLGQVPDAVRESARGVGMSAWQRLWHVDVPLALP--VW 304


>gi|118472106|ref|YP_888794.1| binding-protein-dependent transporters inner membrane component
           [Mycobacterium smegmatis str. MC2 155]
 gi|118173393|gb|ABK74289.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium smegmatis str. MC2 155]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 32/148 (21%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++R+ + + +A++I +P+G+ IG     SS+I   A      P   F  ++       
Sbjct: 77  VSLWRLSIGLAVATVIGMPLGLLIG-----SSRIAERA----GGPIIAFLRMI------- 120

Query: 445 HLNPNLWLSL-LMIFG-------------TQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             +P  W  + L +FG               W +L N  AG  A       VA SFH T 
Sbjct: 121 --SPLSWTPIALAVFGIGNQPVVFLVAVAAVWPVLLNTAAGVRAVDPGLLNVARSFHATR 178

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAW 518
           W     +ILP I  +  TG   A G AW
Sbjct: 179 WEMMLAVILPAIRTHVQTGIRLALGVAW 206


>gi|84385528|ref|ZP_00988559.1| putative permease [Vibrio splendidus 12B01]
 gi|218709515|ref|YP_002417136.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32]
 gi|84379508|gb|EAP96360.1| putative permease [Vibrio splendidus 12B01]
 gi|218322534|emb|CAV18693.1| ABC transporter: transmembrane protein (IM) [Vibrio splendidus
           LGP32]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 25/151 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R   ++ P+LDIMQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNRAQSIVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+ W + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+V+  ++I + G+G  +  +I  Q
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|315505552|ref|YP_004084439.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|315412171|gb|ADU10288.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 278

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  + I FN  AG         E A +  +      R+++LPG  P    G   A 
Sbjct: 149 LVALGAFFPIYFNTYAGIRDIDERLVEAARTCGLGAAARLRHVVLPGALPALFLGLRLAI 208

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW + +V E  +        TG+G  + E+ E      VVLG+LI     LA +
Sbjct: 209 GAAWLSLVVGEQVNA------QTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASD 258


>gi|308068351|ref|YP_003869956.1| ABC transporter permease yqgH [Paenibacillus polymyxa E681]
 gi|305857630|gb|ADM69418.1| Probable ABC transporter permease protein yqgH [Paenibacillus
           polymyxa E681]
          Length = 301

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123
           T L  L A  +SL        +  KS +   +L P ++++  IP  + GF+  TV+    
Sbjct: 89  TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 146

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N++ G+ IG  LA    +    +  +T  M  +L ++P  L E S +   + WQ    +
Sbjct: 147 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 205

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +P  +P L+  +++ M+  +   +A +M++     IP
Sbjct: 206 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIP 243


>gi|170741664|ref|YP_001770319.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168195938|gb|ACA17885.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 297

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 14/189 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R+L  + +  +   +   L    R L  +L+PI+ ++  I  + +L   +  F    
Sbjct: 103 TTMRVLVGLALGFVGGVLVGALLHSVRLLRNLLMPIVLMLAPISPVAWLPVAIFVFG--- 159

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG +  AIF +F +  + +  S    + ++P+    V+R    +  Q FW + +P 
Sbjct: 160 ----IG-DKPAIFLVFITLFFAIVLSTGAQIESVPKTYIHVARIMGATHRQTFWRVILPA 214

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P L   + +++ G W  V+ +E + VG       G+G   A+A    +   + + M  
Sbjct: 215 ILPSLFVTLRLNLFGAWMVVLIAETVGVGT------GLGQITAMARSTFNAKLVFFTMAV 268

Query: 248 MLGVIFLYD 256
           +  + FL D
Sbjct: 269 IGLLGFLSD 277


>gi|319443151|ref|ZP_07992307.1| binding-protein-dependent transport systems inner membrane
           component [Corynebacterium variabile DSM 44702]
          Length = 274

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 5/164 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++RV+V  ++A ++ +P+G++ G  P   + I+P    +   P   F PL +  V   
Sbjct: 81  ISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLTDFIRYMPVVAFVPLTIIWVGTE 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L++  GT + ++  V       P  ++ + ++  +       +I++P   P
Sbjct: 141 DSQKF----LIIWLGTFFQMVLMVADAVRQVPRSYQNLGATLGMGRLSILSHIVVPAALP 196

Query: 505 YYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
                     G AW+  +V+E VA+   +  R T    ++A  T
Sbjct: 197 RIWDTLRLCLGWAWSWLVVAELVAASSGMGYRITQAQRFLATDT 240



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/218 (18%), Positives = 94/218 (43%), Gaps = 20/218 (9%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+V ++  T     L      +  R++   V++++        A  S R    + P+ 
Sbjct: 59  PADVVHVISDTATNGQLWSDMRISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLT 118

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF-AIFTSQVWNMTFSMYQSLCNIPR 163
           D ++ +P++ F+  T+++         +G E +  F  I+    + M   +  ++  +PR
Sbjct: 119 DFIRYMPVVAFVPLTIIW---------VGTEDSQKFLIIWLGTFFQMVLMVADAVRQVPR 169

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             + +  +  +       ++ VP ++P +   + + +   W ++V +E++          
Sbjct: 170 SYQNLGATLGMGRLSILSHIVVPAALPRIWDTLRLCLGWAWSWLVVAELVAASS------ 223

Query: 224 GIGSYIALAIK--EQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G  I  A +    D +     +L +LG+IF  DQ++
Sbjct: 224 GMGYRITQAQRFLATDTIIAYVIVLGLLGLIF--DQIM 259


>gi|157147150|ref|YP_001454469.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895]
 gi|157084355|gb|ABV14033.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895]
          Length = 207

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 35/194 (18%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y D+L  +W   +    V   +++A  I + +GI    RP + + +     ++ + P   
Sbjct: 8   YDDILLALWQHLVL---VGAAMLMAFAISLFLGITTARRPRLYALVMAVTGMIFSIPGLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLM---IFGTQWYILF----NVIAGASAFPNDFKEVASS 485
            F L++            WL + M   I G   Y L     N+  G  A P D +E A  
Sbjct: 65  LFALLIP-----------WLGIGMLPAIVGLTAYALMILTRNIATGFHAIPLDVREAARG 113

Query: 486 FHITGWRWWRYIILPGIFPYYVTG---AITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
                WR  R + LP   P+ +TG   A T   G      ++ VA++    +   GLGA 
Sbjct: 114 MGYGAWRNLREVELPLALPFIITGLRIATTTLIG------IATVAAY----INAGGLGAI 163

Query: 543 IAESTEKGSFPEVV 556
           I    ++  +PE +
Sbjct: 164 ILAGLDQ-RYPEKI 176


>gi|302335464|ref|YP_003800671.1| binding-protein-dependent transport systems inner membrane
           component [Olsenella uli DSM 7084]
 gi|301319304|gb|ADK67791.1| binding-protein-dependent transport systems inner membrane
           component [Olsenella uli DSM 7084]
          Length = 253

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 11/176 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR F  +   LA  LV   + ++L  +    +P     +V +  D   L  +++ T L 
Sbjct: 4   ARRTFIPLTATLAL-LVAWQLAVMLGLVPNFLLPSPTQVVVALIEDASLLVSHSAATLLE 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
               ++I     FV A L  +   +G+ L P++ + Q+IP +      V++F   L P  
Sbjct: 63  AFLGLLIGCAVGFVVAVLMDRFEAVGLALDPLVTLSQTIPTVAIAPLLVLWFGYGLAPKV 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           V+         +  S  + +T S+     +   D+ ++ R+     WQ FW + +P
Sbjct: 123 VL---------VIISTFFPITVSLVSGFRSADADMIDLMRTMNAGDWQIFWQVKIP 169


>gi|224824410|ref|ZP_03697518.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224603829|gb|EEG10004.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 290

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 24/181 (13%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           PQ  S   L  LSA +ISL+         A+S+R+  ++ P+LD MQ++P   +L    +
Sbjct: 97  PQTVSTLALT-LSATLISLMIGIPTGIWCARSKRVNTLVRPVLDFMQTMPAFVYLIPAAM 155

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G+V G     +FA+    V   +  + Q    + ++  E   +F  +  Q  +
Sbjct: 156 FF---GLGRVPGILATVVFAV-PPAVRLTSLGIRQ----VNKEQVEAGHAFGCTSTQLLF 207

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D
Sbjct: 208 KVQLPIALPAIMAGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLSSIQRLD 256

Query: 238 L 238
           +
Sbjct: 257 V 257


>gi|114707706|ref|ZP_01440601.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
 gi|114536950|gb|EAU40079.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
          Length = 268

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E+AAI AI  +++ N+  +M +    + RDL E++  +R    ++  ++ +P   P    
Sbjct: 136 EVAAIGAIAVNKIPNVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQLQPYFAA 195

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                ++  W   +  E++   D      G+G  I L  +  D+  IL   L  + V+ L
Sbjct: 196 ASRSGLALIWKIALVVELLGRSD------GVGFQINLYFQLFDVAGILAYTLAFVAVMLL 249

Query: 255 YDQLLFRPMIVWSNKFR 271
            + L+ +P+   + ++R
Sbjct: 250 IELLIVQPLEAHATRWR 266



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV    + A +I   +GI +G     +    P+  L    PA     LVV  ++Y
Sbjct: 75  AMTLMRVFFAFVAAMVIGSAIGIALGISREANRFFDPWLILFLNIPA-----LVVIVLAY 129

Query: 444 --YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             + LN    +  + +      ++  +  GA A   D  E+A  +     +  R+++LP 
Sbjct: 130 IWFGLNEVAAIGAIAVNKIP-NVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQ 188

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + PY+   + +     W  ++V E+        R+ G+G  I    +      ++   L 
Sbjct: 189 LQPYFAAASRSGLALIWKIALVVELLG------RSDGVGFQINLYFQLFDVAGILAYTLA 242

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLR 586
               +L +   +  PL  + TR  R
Sbjct: 243 FVAVMLLIELLIVQPLEAHATRWRR 267


>gi|107022636|ref|YP_620963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116689585|ref|YP_835208.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105892825|gb|ABF75990.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116647674|gb|ABK08315.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 270

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  + R    WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270


>gi|310641205|ref|YP_003945963.1| phosphate abc transporter, permease pstc [Paenibacillus polymyxa
           SC2]
 gi|309246155|gb|ADO55722.1| Phosphate ABC transporter, permease PstC [Paenibacillus polymyxa
           SC2]
          Length = 310

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123
           T L  L A  +SL        +  KS +   +L P ++++  IP  + GF+  TV+    
Sbjct: 98  TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 155

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N++ G+ IG  LA    +    +  +T  M  +L ++P  L E S +   + WQ    +
Sbjct: 156 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 214

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +P  +P L+  +++ M+  +   +A +M++     IP
Sbjct: 215 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIP 252


>gi|158314940|ref|YP_001507448.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158110345|gb|ABW12542.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G +TM  V+V   + S++ I + + I     +     PF       P     P++++ + 
Sbjct: 81  GWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWMG 140

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +   +  L   LL +F     +L N I G  +   D  ++  +   T W+ +RY+ LP  
Sbjct: 141 FGEASKMLMAGLLTLFP----VLVNTITGLKSVEQDQLDLMRALQATEWQIFRYVRLPRA 196

Query: 503 FPYYVTG 509
            PY   G
Sbjct: 197 LPYIFAG 203


>gi|167566077|ref|ZP_02358993.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia oklahomensis EO147]
 gi|167573155|ref|ZP_02366029.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia oklahomensis C6786]
          Length = 300

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|238027525|ref|YP_002911756.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
 gi|237876719|gb|ACR29052.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
          Length = 278

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + I  N   G  +   +  E+
Sbjct: 118 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVSLGVFFPIYINTYHGIRSVDANLIEM 173

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G   +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 174 ARSYGVKGLALYRDVILPGALPSILVGVRFALGLTWVMLIVAETIS------AQSGIGYM 227

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 228 TMNAREFLQTDVVVVGILLYAILGKLADVLAKWLERTTLRWHPAYQPGAKA 278


>gi|269124729|ref|YP_003298099.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268309687|gb|ACY96061.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 273

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R  +   + +I  I + +  G        + P  Q+L A P    F L+   + ++
Sbjct: 79  VSLRRAALGFALGAIAGIGLALIAGLSRLGEHAVDPPMQMLRALP---LFGLIPLFILWF 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     ++L + FG  + +  N  AG         E+     ++     R+I+LPG  P
Sbjct: 136 GIGETPKIAL-VAFGVAFPLYLNTYAGIRGVDAKLAELGKVLRLSRAALIRHIVLPGALP 194

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW A IV+E  +         GLG  I ++ E      VV+G+L    
Sbjct: 195 QTLVGLRQSLGVAWLALIVAEQINANQ------GLGFMINDAREFLRTDIVVVGLLTYAA 248

Query: 565 FVLALNRF 572
             L  + F
Sbjct: 249 LGLLTDAF 256


>gi|271963349|ref|YP_003337545.1| ABC transporter transmembrane protein [Streptosporangium roseum DSM
           43021]
 gi|270506524|gb|ACZ84802.1| ABC transporter membrane protein [Streptosporangium roseum DSM
           43021]
          Length = 256

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++IA  + +P G+ +G  P + S ++P  + L   P+    PL +    +   +      
Sbjct: 68  LLIAVAVAVPAGLLLGTVPTVESALRPLIEFLRPIPSVALIPLAL----FLFTDGTQAKV 123

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L++F   W +L N + G        K+   SF          + LP   P+ VTG   A
Sbjct: 124 ALIVFTAAWPLLINTMYGLREVDPVAKDTLRSFGFGPLAVVVRVSLPSAAPFVVTGVRIA 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              A   ++  E+ + G       G+G ++ ++
Sbjct: 184 ASVALIVAVSVELVAGG------AGIGTFLGDA 210


>gi|217978592|ref|YP_002362739.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217503968|gb|ACK51377.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 270

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 11/109 (10%)

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           W   ++ + ++  I RDL EV+R+F   G + + + + +P + PG++  +   +   W  
Sbjct: 153 WINFYAAFGAVQAIDRDLMEVARAFGHGGFFGRLFKIALPAATPGILAGVRTGLGQAWMS 212

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           VVA+E+  V       PGIG+ +   ++   LLA    ++ ML +  LY
Sbjct: 213 VVAAELFGV-------PGIGARM---MQAASLLATDLVVVYMLTMALLY 251


>gi|121608093|ref|YP_995900.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552733|gb|ABM56882.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 255

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 19/197 (9%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+   + A+++ IP+GI++G   +  +   P   LL   P+  + PL    + ++ +  
Sbjct: 69  RVMTGFLAATVVAIPLGIFLGMSRYARAAFDPILSLLRPLPSMSWIPL---SLLWFGITE 125

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               S++ + G     L  VI             A +   + W+  R ++LPG  P  ++
Sbjct: 126 TQKYSIVFM-GCFAPALVYVIEATRNVDPVLIRAAQNLGASRWQVMREVVLPGSLPQILS 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL- 567
           G     G AW   I +E+ +         GLG  I    E      VVLG++++   VL 
Sbjct: 185 GLKIILGLAWTCVISAELVA------AREGLGFLIMNGKEFFQTEVVVLGMVMISLTVLL 238

Query: 568 ------ALNRFL--WHP 576
                 A+ R L  W P
Sbjct: 239 TDVVFRAIGRKLLRWQP 255


>gi|114706924|ref|ZP_01439823.1| putative permease protein [Fulvimarina pelagi HTCC2506]
 gi|114537474|gb|EAU40599.1| putative permease protein [Fulvimarina pelagi HTCC2506]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 31/178 (17%)

Query: 69  TLRMLSAMVI----SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123
           T++ LS +V+    S+L       L ++S +L  ++ PILD+MQ++P   +L   V+   
Sbjct: 86  TMQTLSIIVVCTLLSILIGMPIGILMSRSDKLQAIVNPILDVMQTMPSFVYLIPIVMLLG 145

Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           + L PG ++      I+A+    ++ N+   +      + +++ E + +F  S WQK   
Sbjct: 146 IGLIPGLIV----VVIYAMPPIIRLTNLGIRL------VDKEVLEAANAFGSSSWQKLVQ 195

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           + +P S+P    G+   +MM+++          M+VV  ++I + G+G  +  AI  Q
Sbjct: 196 VQLPLSLPTIMAGINQTIMMALA----------MVVVA-SLIGVRGLGQPVLQAITNQ 242


>gi|91224752|ref|ZP_01260012.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01]
 gi|254227614|ref|ZP_04921045.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395662|ref|YP_003287515.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|269964379|ref|ZP_06178621.1| putative permease of ABC transporter [Vibrio alginolyticus 40B]
 gi|91190298|gb|EAS76567.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01]
 gi|151939656|gb|EDN58483.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339256|gb|ACY53050.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|269830876|gb|EEZ85093.1| putative permease of ABC transporter [Vibrio alginolyticus 40B]
          Length = 266

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V 
Sbjct: 77  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 136

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P +L E  ++F  S  +  +
Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 187

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 188 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 240

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 241 FEAGLAIVLVAIILDRLCKAP 261


>gi|256396485|ref|YP_003118049.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM
           44928]
 gi|256362711|gb|ACU76208.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 294

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 16/180 (8%)

Query: 403 PVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+GI +G F+P + + I P    L + P+  + P     + ++  +P +  S++++ G  
Sbjct: 115 PLGILVGRFKP-VRAGIGPILSGLQSLPSVAWVP---PALMFFGPSPAMLYSVVLL-GAV 169

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I   V++G    P  +  V  +    G    R+++LP   P Y+ G       AW + 
Sbjct: 170 PSIAVGVMSGLDQVPPLYLRVGHNIGARGLASVRHVLLPAALPGYLAGLRQGWAFAWRSL 229

Query: 522 IVSEV----ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           + SE+    AS GH       LG  +  S +          ++++    +A+N+ L+ PL
Sbjct: 230 LASEIIVQSASLGH------SLGFLLKNSQDGNDMSGAFAAIVLILAVGVAVNQLLFVPL 283


>gi|254473093|ref|ZP_05086491.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211957814|gb|EEA93016.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 236

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 15/168 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A L + SRR+ + L+P +   QS+P+       V++F      KV+ A +   F++    
Sbjct: 64  AILLSMSRRVRLFLLPPIAATQSLPVFAIAPLLVLWFGFGLASKVVMAVIVIFFSV---- 119

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
               T + +  L    + L ++ +   L+ WQ   Y+ +P +MP L   M ++       
Sbjct: 120 ----TSTFFDGLRRTDQSLLDLGKLHGLNRWQMLRYIRIPAAMPSLASGMRIAA------ 169

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           V A    VVG+ V    G+ ++I L    +   A ++A L +L V+ L
Sbjct: 170 VFAPIGAVVGEWVGAKGGL-AFIMLQSNARMQTATMFAALILLAVMVL 216


>gi|291458320|ref|ZP_06597710.1| putative ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418853|gb|EFE92572.1| putative ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 256

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 89/207 (42%), Gaps = 23/207 (11%)

Query: 378 YVIWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++ L  I    ++V  I+ S+ + + +G+ +G    +   + P    ++  P+ +  P 
Sbjct: 58  YIMLLNLIASLSILVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILLSPF 117

Query: 437 VVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +       L PN   +   L+++ + W  +F  I G       + + A +  + G+R  
Sbjct: 118 AL------LLAPNFRTASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRKL 171

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  ++G + +  G +   + +E+    +      G+G Y+ ++   G + +
Sbjct: 172 FRVMLPAASPSIISGFVNSLSGTFVMLVYAEMYGAEY------GMGYYVRQNAMLGLYDK 225

Query: 555 --------VVLGVLIMCCFVLALNRFL 573
                   +V+ V+IM  F    NR L
Sbjct: 226 TWAGFIFMIVILVIIMQIFEKIRNRLL 252



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++ A+VISL    +   +   +R L   L P+L  +  +P +    F ++   N      
Sbjct: 71  LVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILLSPFALLLAPNF----- 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                A++F I    VW   F     +  I R   + + +  L G++K + + +P + P 
Sbjct: 126 ---RTASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRKLFRVMLPAASPS 182

Query: 192 LVWNMMMSMSGGWFFVVASEM 212
           ++   + S+SG +  +V +EM
Sbjct: 183 IISGFVNSLSGTFVMLVYAEM 203


>gi|163790850|ref|ZP_02185275.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7]
 gi|159873918|gb|EDP67997.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7]
          Length = 283

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 27/164 (16%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L A ++S++    +  L AK++    ++ P+LD MQ++P   +L   V +F + + PG 
Sbjct: 105 VLVASLLSVIIGVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFGIGMVPG- 163

Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188
            + A L  IFAI  T +  N+       +  +  +L E + SF  +G QK + + +P + 
Sbjct: 164 -VFASL--IFAIPPTVRFTNL------GIRQVSDELVEAAESFGSTGAQKLFKVELPLAK 214

Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
              M G+   +M+++S          M+V+  ++I  PG+G  +
Sbjct: 215 STIMAGINQTVMLALS----------MVVIA-SMIGAPGLGREV 247


>gi|153008760|ref|YP_001369975.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151560648|gb|ABS14146.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 257

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV--SCVS 442
           +T++RV+   ++AS++ IP+GI +G    I + ++PF       PA+ F PL++  S + 
Sbjct: 66  MTVWRVLGGFVLASVVAIPLGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWSGIG 125

Query: 443 YYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                      LL+IF G  + I+  +    S    D  E A +   +     R +++P 
Sbjct: 126 ETQ-------KLLVIFIGAVFQIILMIAVTVSNTRRDLVEAAYTLGASNSGIIRRVLMPA 178

Query: 502 IFPYYVTGAITACGGAWNASIVSEV 526
             P          G AW   IV+E+
Sbjct: 179 SAPDIAETLRLVLGWAWTYVIVAEL 203


>gi|328545184|ref|YP_004305293.1| glycine betaine/l-proline transporter permease prow [polymorphum
           gilvum SL003B-26A1]
 gi|326414926|gb|ADZ71989.1| Glycine betaine/l-proline transport system permease protein prow
           [Polymorphum gilvum SL003B-26A1]
          Length = 282

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL  VL PILD+MQ+IP   +L   ++ F + + PG +     A    I  +++ 
Sbjct: 118 AAHRPRLYAVLRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPIRLTRL- 176

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
                    + + P  L E   +F  +  Q  W + +P+++P    GL   +M+S+S
Sbjct: 177 --------GVASTPVQLLEAGHAFGATRSQLLWKVELPYALPQIMAGLTQTIMLSLS 225


>gi|312865610|ref|ZP_07725835.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus downei F0415]
 gi|311098878|gb|EFQ57097.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus downei F0415]
          Length = 575

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AK+     V+ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 122 AKNETAKKVINPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRMTN 178

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  IP +L E S +F  +  QK + + +P +    M G+   +M+S+S    
Sbjct: 179 L------GIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIMLSLS---- 228

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  +VV  ++I  PG+G+ +  A++  ++
Sbjct: 229 -------MVVTASMIGAPGLGNGVLSALQHAEI 254


>gi|306831429|ref|ZP_07464587.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978336|ref|YP_004288052.1| phosphate transport system permease pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|304426214|gb|EFM29328.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178264|emb|CBZ48308.1| phosphate transport system permease protein pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 305

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 177 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236

Query: 215 VGDTVIP 221
               V+P
Sbjct: 237 GNSAVVP 243


>gi|254455769|ref|ZP_05069198.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082771|gb|EDZ60197.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 500

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 12/192 (6%)

Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W+  +T   ++    I SI I IP+GI+   R    S I+P    +   PA VF   ++ 
Sbjct: 312 WVKAMTTLALLGTAAILSIAIGIPLGIFCARRQRFYSMIRPIMDFMQTMPAFVF---MIP 368

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++++       + + MIFG    +   V+ G    P   +E A ++  T W   R + L
Sbjct: 369 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 427

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G       +    +V+ +       +   GLG  + E+ +  +  + +L  
Sbjct: 428 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 480

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 481 VAILFVALILDR 492


>gi|297570467|ref|YP_003691811.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurivibrio alkaliphilus AHT2]
 gi|296926382|gb|ADH87192.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurivibrio alkaliphilus AHT2]
          Length = 263

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R     ++A ++ +P+G+ +G+   +   + P  QLL       +FPL    V +
Sbjct: 69  AVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPL---AVLW 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + +  +L    ++   + + IL + IA      + + +VA +F  + W     +++P  F
Sbjct: 126 FKIG-DLPAIFIIFIASFFPILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKVVIPAAF 184

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           PY + G   A G  W   +  E+          +GLG +I ++  
Sbjct: 185 PYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARN 223


>gi|238759169|ref|ZP_04620337.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia aldovae ATCC 35236]
 gi|238702585|gb|EEP95134.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia aldovae ATCC 35236]
          Length = 347

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 162 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 216

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 217 TI---LGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 269

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 270 VVIASMIAVG-------GLGQMVLRGIGRLDM 294


>gi|167840043|ref|ZP_02466727.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis MSMB43]
          Length = 300

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|71736948|ref|YP_276994.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71557501|gb|AAZ36712.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++    +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|288905349|ref|YP_003430571.1| phosphate ABC transporter permease [Streptococcus gallolyticus
           UCN34]
 gi|288732075|emb|CBI13640.1| Putative phosphate ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
          Length = 305

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 177 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236

Query: 215 VGDTVIP 221
               V+P
Sbjct: 237 GNSAVVP 243


>gi|330967525|gb|EGH67785.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++ +   +  +LG +  L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|330891647|gb|EGH24308.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++ +   +  +LG +  L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|330891305|gb|EGH23966.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 97/205 (47%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA+      ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAQKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|330874193|gb|EGH08342.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++    +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|288961125|ref|YP_003451464.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288913433|dbj|BAI74920.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 270

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N+ AG         E  S+  +T W     +ILPG  P ++TG   A 
Sbjct: 141 LVALGTAFPIYLNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGALPAFLTGLRYAL 200

Query: 515 GGAWNASIVSE 525
           G AW + +V E
Sbjct: 201 GVAWLSLVVGE 211



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ + + I +    V A +A  SRR    L  +L +++++P L  +   +++F      K
Sbjct: 79  RVSAGLAIGVSAGTVCALIAGLSRRGEDALDALLQMLRTLPHLALVPLFILWFGIGETPK 138

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +    L   F I+         +++  +  +   + E   +  L+ W+    + +P ++P
Sbjct: 139 IALVALGTAFPIY--------LNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGALP 190

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYA 244
             +  +  ++   W  +V      VG+ +    GIG Y+A+  +E    D++    I+YA
Sbjct: 191 AFLTGLRYALGVAWLSLV------VGEQINASSGIG-YLAMTAREFLRTDVIIVALIVYA 243

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           +L +L  + +  +L+ R  +VW   F  E
Sbjct: 244 ILGLLADLIV--RLIERSALVWRPAFIKE 270


>gi|170732889|ref|YP_001764836.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169816131|gb|ACA90714.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 270

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  + R    WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270


>gi|222055581|ref|YP_002537943.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564870|gb|ACM20842.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 297

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 13/189 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
            I++ R +  +  A I+ IP+G I  G+ P ++  + P  +LL    A   FPL V    
Sbjct: 104 AISLQRTLQGLFFALIVAIPLGFILAGWFPRLTRFLGPLLRLLGEINAFSLFPLFVLFFG 163

Query: 443 YYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
              L         +IF    W ILF  IAG       F ++A S        +  ++LPG
Sbjct: 164 IGELA-----KFSIIFWSCLWPILFTTIAGVRGVDPLFVKLARSMGSGRLLLFFKVLLPG 218

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG       A+   I +E+         +TGLG  I  S      P + LG ++
Sbjct: 219 ALPSIFTGIRLGATVAFLMLIAAEMIG------ASTGLGWLIHNSNVNFIMPRLYLGAVL 272

Query: 562 MCCFVLALN 570
           +    +ALN
Sbjct: 273 VALLGMALN 281


>gi|328949595|ref|YP_004366930.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328449919|gb|AEB10820.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 287

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 29/181 (16%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   M+ A  IS+L       L ++S RL   L+P+LD MQ++P   +L   ++ F 
Sbjct: 93  AIQTLALMIVATTISVLIGVPTGILMSRSDRLRAFLLPLLDAMQTMPSFVYLIPALMLF- 151

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFW 181
                      L  + A+F + ++ +  ++  +   I    +++ E S +F  +  QK  
Sbjct: 152 ----------GLGKVPAVFATVIYAVPPAIRLTDLGIRLVDKEVLEASEAFGATARQKLL 201

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P ++P    G+    MM++S          M+V+  ++I   G+G  + L I+  D
Sbjct: 202 GVQLPLALPNIMAGINQTTMMALS----------MVVIA-SMIGARGLGEQVLLGIQRLD 250

Query: 238 L 238
           +
Sbjct: 251 V 251


>gi|317485030|ref|ZP_07943912.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316923565|gb|EFV44769.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 252

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 19/204 (9%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+  + +A ++  P+G+ +G    + + + P   L    P  V  PL ++      L P
Sbjct: 59  RVLSAMSLAWLVAFPLGLILGHVRSVDNTLSPMVFLTYPLPKIVLLPLFLTLFGLGDL-P 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   LL+   T + IL    A A      + +   S   T  +  R++++P   P  +T
Sbjct: 118 RV---LLIALTTGYQILVVTRASAQGLDKKYLDSFRSLGGTPLQMLRHVLIPAALPDAMT 174

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC----- 563
               A G A     ++E  +         GLG  I ++  +G   E+  G+L M      
Sbjct: 175 ALKVASGTAVAVLFMAESFA------TRRGLGFLIMDAWGRGDQLEMFTGILAMSLLGVA 228

Query: 564 ----CFVLALNRFLWHPLYLYGTR 583
               C VL      W   ++ G R
Sbjct: 229 LYELCNVLETRSCRWRNFHMAGKR 252


>gi|27376029|ref|NP_767558.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349168|dbj|BAC46183.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 335

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   L P +  +++IP L ++   +++       K+    +   F ++         
Sbjct: 166 ARRL---LDPTVQALRAIPSLAWVPLFILWLGIFETSKIALIAVGVFFPVY--------L 214

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++ ++ R + EV R+FRLSG      + +P  +P  V ++ + +  GW FVVA+E+
Sbjct: 215 GVMGAILSVDRKIVEVGRTFRLSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAAEL 274

Query: 213 I 213
           I
Sbjct: 275 I 275


>gi|257483758|ref|ZP_05637799.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289626097|ref|ZP_06459051.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289651125|ref|ZP_06482468.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|320326458|gb|EFW82510.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331751|gb|EFW87689.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330868944|gb|EGH03653.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
 gi|330872577|gb|EGH06726.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330987201|gb|EGH85304.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331012090|gb|EGH92146.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++ +   +  +LG +  L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|138896247|ref|YP_001126700.1| putative aliphatic sulfonates ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267760|gb|ABO67955.1| Putative transport system permease protein of aliphatic sulfonates
           ABC transporter [Geobacillus thermodenitrificans NG80-2]
          Length = 261

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 15/191 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+V      L+   L Q+ S +  R L    I     FV   L    R    +L   +
Sbjct: 44  PTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSI 103

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++++IP L  +   +++F      KV    +  +F I+ + +          + N+   
Sbjct: 104 QMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTL--------HGIRNVDAG 155

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E+ R + L  WQ FW + +P ++  ++  +  ++   W        ++V +T+    G
Sbjct: 156 LLEMGRVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWL------TLIVAETIAADRG 209

Query: 225 IGSYIALAIKE 235
           IG Y+A+  +E
Sbjct: 210 IG-YLAMNARE 219


>gi|22126005|ref|NP_669428.1| inner membrane permease for ABC transporter [Yersinia pestis KIM
           10]
 gi|45441867|ref|NP_993406.1| putative transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51596533|ref|YP_070724.1| ABC taurine/sulfonate transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108807630|ref|YP_651546.1| putative transport system permease [Yersinia pestis Antiqua]
 gi|108811909|ref|YP_647676.1| transport system permease [Yersinia pestis Nepal516]
 gi|145598157|ref|YP_001162233.1| transport system permease [Yersinia pestis Pestoides F]
 gi|149365800|ref|ZP_01887835.1| putative transport system permease [Yersinia pestis CA88-4125]
 gi|153949819|ref|YP_001400823.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|165927246|ref|ZP_02223078.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938542|ref|ZP_02227098.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010611|ref|ZP_02231509.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166210486|ref|ZP_02236521.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400827|ref|ZP_02306333.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167424872|ref|ZP_02316625.1| ABC transporter , permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466995|ref|ZP_02331699.1| ABC transporter , permease protein [Yersinia pestis FV-1]
 gi|170024194|ref|YP_001720699.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186895593|ref|YP_001872705.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|218929379|ref|YP_002347254.1| putative transport system permease [Yersinia pestis CO92]
 gi|229837803|ref|ZP_04457962.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229894962|ref|ZP_04510140.1| putative transport system permease [Yersinia pestis Pestoides A]
 gi|229898364|ref|ZP_04513511.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902209|ref|ZP_04517330.1| putative transport system permease [Yersinia pestis Nepal516]
 gi|270490685|ref|ZP_06207759.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|21958952|gb|AAM85679.1|AE013814_7 putative inner membrane permease for ABC transporter [Yersinia
           pestis KIM 10]
 gi|45436729|gb|AAS62283.1| putative transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51589815|emb|CAH21447.1| putative ABC taurine/sulfonate transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775557|gb|ABG18076.1| transport system permease [Yersinia pestis Nepal516]
 gi|108779543|gb|ABG13601.1| putative transport system permease [Yersinia pestis Antiqua]
 gi|115347990|emb|CAL20915.1| putative transport system permease [Yersinia pestis CO92]
 gi|145209853|gb|ABP39260.1| transport system permease [Yersinia pestis Pestoides F]
 gi|149292213|gb|EDM42287.1| putative transport system permease [Yersinia pestis CA88-4125]
 gi|152961314|gb|ABS48775.1| ABC transporter , permease protein [Yersinia pseudotuberculosis IP
           31758]
 gi|165913416|gb|EDR32037.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920914|gb|EDR38162.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990313|gb|EDR42614.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207666|gb|EDR52146.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167049680|gb|EDR61088.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167056059|gb|EDR65837.1| ABC transporter , permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750728|gb|ACA68246.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186698619|gb|ACC89248.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229681105|gb|EEO77200.1| putative transport system permease [Yersinia pestis Nepal516]
 gi|229688654|gb|EEO80723.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694169|gb|EEO84216.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702057|gb|EEO90078.1| putative transport system permease [Yersinia pestis Pestoides A]
 gi|262362187|gb|ACY58908.1| putative transport system permease [Yersinia pestis D106004]
 gi|262365521|gb|ACY62078.1| putative transport system permease [Yersinia pestis D182038]
 gi|270339189|gb|EFA49966.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|320014943|gb|ADV98514.1| putative transport system permease [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 273

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 35/207 (16%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV++  +I +++ +P+G+W+G     +  + P  Q L   P   + PL +       
Sbjct: 80  SIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAM------- 132

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  L       L+  G  + IL N IAG       +   A +        +R II
Sbjct: 133 ----LWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRII 188

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--------KG 550
           LP   PY +TG     G A+   IV+E+ +        +G+G  I E+ E         G
Sbjct: 189 LPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYMWSDKVIAG 242

Query: 551 SFPEVVLGVLIMCCFVLALNRFL--WH 575
            F    LG++I  C    LNR L  WH
Sbjct: 243 MFTIGFLGLVIDLCMD-RLNRRLLRWH 268


>gi|330874200|gb|EGH08349.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 285

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A++  IPVGI IG          P  + 
Sbjct: 73  GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEF 131

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +  L L  L IF     I      G           A 
Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTRVRAAQ 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 241

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267


>gi|329906592|ref|ZP_08274444.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327547230|gb|EGF32082.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 277

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV    ++++I+ IP+G+ IG    + + ++P        PA  F PL++  V   
Sbjct: 84  ISIGRVFGGFLLSAILAIPIGVMIGTYAPVRALLEPLTDFSRYLPAVAFIPLIMLWVG-- 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++ +  L+++ + GT + ++  +    +  PN   E A +   T     R +++P   P
Sbjct: 142 -IDESAKLTVIFV-GTFFQMVLMLAEDIALVPNQPVEAARTMGATNSEIVRLVLIPAARP 199

Query: 505 YYVTGAITACGGAWNASIVSEVAS 528
             +       G AW   +V+E+ +
Sbjct: 200 AMLDTLRQTMGLAWTYLVVAELVA 223


>gi|167562868|ref|ZP_02355784.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167570055|ref|ZP_02362929.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 272

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + I  N   G  +      E+
Sbjct: 112 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPIYINTYHGIRSVDAGLVEM 167

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 168 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 221

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 222 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERATLRWHPAYQPGAQA 272


>gi|73541663|ref|YP_296183.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119076|gb|AAZ61339.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 267

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+    ++ ++    L  L+  G  + +  N   G  A      E+
Sbjct: 110 QMVRNIPTLALIPLVIL---WFGIDETAKL-FLVALGVFFPVYLNTFHGIRAVDPGLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GWR +R +ILPG  P  + G   + G  W   IV+E  S        +G+G  
Sbjct: 166 ARSYGLSGWRLYREVILPGALPNILVGVRFSLGLMWVILIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVL---IMCCFVLALNRFL------WHPLY 578
              + E      V++G+L   ++      L+R L      WHP Y
Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADVLSRGLERIWLRWHPGY 264


>gi|325285649|ref|YP_004261439.1| ABC-type transporter, integral membrane subunit [Cellulophaga
           lytica DSM 7489]
 gi|324321103|gb|ADY28568.1| ABC-type transporter, integral membrane subunit [Cellulophaga
           lytica DSM 7489]
          Length = 366

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A II +P+G+ IG  P + S    F Q+       V++ LV   V   ++  +   + 
Sbjct: 171 LLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVVWYLLVFMIVKTLYIGASSDNAF 230

Query: 455 LMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           ++ F +      W  L N   G S+   D+  VA    +  ++    +ILP   P   TG
Sbjct: 231 VISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLKLGTFQKVFKVILPSSLPLIFTG 290

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  AW   I  E+ +      ++ GLG ++ E  + G+        +I+  FV+ +
Sbjct: 291 LRITLSVAWMVLIAIELLA------QSPGLGLFVWEEFQNGANDSN--AKIIVAMFVIGI 342

Query: 570 NRFLWHPLYL 579
             FL   L L
Sbjct: 343 IGFLLDRLML 352


>gi|298489302|ref|ZP_07007318.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156201|gb|EFH97305.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++    +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVQAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573
           G  W   IV+E  S       ++G+G Y+A +  +    ++V+  +++   +  L     
Sbjct: 191 GFMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDIVVQAIVLYAVLGKLADLAA 243

Query: 574 ---------WHPLY 578
                    WHP Y
Sbjct: 244 RGLERVCLRWHPAY 257


>gi|320539791|ref|ZP_08039450.1| putative taurine transporter subunit [Serratia symbiotica str.
           Tucson]
 gi|320029977|gb|EFW11997.1| putative taurine transporter subunit [Serratia symbiotica str.
           Tucson]
          Length = 278

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 10/163 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++  ++ A II IPVG  +G    +   + P  ++    P   + PL+V       
Sbjct: 86  SLGRIMAALLAAVIIGIPVGFAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGE 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  L +S L IF     +  + +AG  +        A +     W+  R+++LP   P 
Sbjct: 146 TSKILLIS-LAIFAP---VTLSAMAGVRSVARVRVRAARTLGANRWQVLRFVVLPSALPE 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 202 MLTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 238


>gi|318061285|ref|ZP_07980006.1| ABC transporter permease protein [Streptomyces sp. SA3_actG]
 gi|318078276|ref|ZP_07985608.1| ABC transporter permease protein [Streptomyces sp. SA3_actF]
          Length = 303

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + + +T   +L  IW    ++ R +   ++A +I  P+G+ +     + + I P    
Sbjct: 86  GELSDAWTRGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 142

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P     V +  LN  +  +++++ G    I   +++G    P  +     
Sbjct: 143 LQSLPSVAWVP---PAVLWLGLNSPMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 198

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543
           +   TG R   +I+LP   P Y+ G       +W + + +E +AS   + +   GLG  +
Sbjct: 199 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 255

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  S   V L + ++    +A++  ++ PL     R LR
Sbjct: 256 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 295


>gi|167422071|ref|ZP_02313824.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|166958883|gb|EDR55904.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
          Length = 259

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 35/207 (16%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV++  +I +++ +P+G+W+G     +  + P  Q L   P   + PL +       
Sbjct: 66  SIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAM------- 118

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  L       L+  G  + IL N IAG       +   A +        +R II
Sbjct: 119 ----LWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRII 174

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--------KG 550
           LP   PY +TG     G A+   IV+E+ +        +G+G  I E+ E         G
Sbjct: 175 LPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYMWSDKVIAG 228

Query: 551 SFPEVVLGVLIMCCFVLALNRFL--WH 575
            F    LG++I  C    LNR L  WH
Sbjct: 229 MFTIGFLGLVIDLCMD-RLNRRLLRWH 254


>gi|294084957|ref|YP_003551717.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664532|gb|ADE39633.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 296

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 26/197 (13%)

Query: 68  TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TL ++S A +I + F      L A+S R   ++ PILDIMQ+IP   +L   V   M L
Sbjct: 102 ATLAIISVATLICIGFGIPLGILMARSNRAQSIITPILDIMQTIPSFVYLIPVV---MLL 158

Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G     I+AI    ++ N+   +      + +++ E + +F  +  Q+ + + +
Sbjct: 159 GIGKVPGMIAVCIYAIPPIVRLTNLGIRL------VDKEVLEAADAFGANYKQRLFGVQI 212

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           P ++P    G+   +MM+++          M+V+  ++I + G+G  +  A+  Q L   
Sbjct: 213 PLALPNIFAGVNQTIMMALA----------MVVIA-SMIGVKGLGVPVLQAVANQYLALG 261

Query: 242 LYAMLTMLGVIFLYDQL 258
           L   L ++ +  ++D++
Sbjct: 262 LMNGLAIVALAIIFDRV 278


>gi|254562523|ref|YP_003069618.1| ABC transporter membrane protein [Methylobacterium extorquens DM4]
 gi|254269801|emb|CAX25774.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens DM4]
          Length = 291

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP +   +  R+LS  + +L           +SR    +L+P L++++ IP + ++   
Sbjct: 89  ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F +        +E++  F  FT  ++ +  +    + ++   L   +RS        
Sbjct: 149 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              + +P + P +V    + M   WF +V +EMI
Sbjct: 201 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 234



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A  + + +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 97  SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++    ++ +   G  + IL N + G  +        A S         R +ILPG  P 
Sbjct: 157 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++
Sbjct: 213 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 263


>gi|111018598|ref|YP_701570.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110818128|gb|ABG93412.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 273

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +AS T    L    +SLLF +  A L   S  L    VP+  + Q++PI+      +++F
Sbjct: 73  HASATLQVTLIGFAVSLLFAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWF 132

Query: 124 -MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L P K++   LA  F         MT  + +      R+   + RS   S WQ+F Y
Sbjct: 133 GFGLLP-KILVIALATFF--------PMTIGLIEGFAAADREAGALLRSMGASRWQEFRY 183

Query: 183 LGVPFSMP 190
           + +P ++P
Sbjct: 184 VRLPSAIP 191


>gi|91777143|ref|YP_552351.1| glycine betaine/choline/proline ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91689803|gb|ABE33001.1| ABC glycine betaine/choline/proline family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 238

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I +I  +IP L  L   +  F        IG ++ A+ A+F + +  +T + Y+ + N+ 
Sbjct: 82  IFNIGNTIPSLAVLAIALGIFG-------IG-DIPALIALFLASLLPITRNAYEGMKNVS 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E +R   ++GWQ    + +P +MP ++  +  +++
Sbjct: 134 PALREAARGLGMTGWQSLLRVELPNAMPIIIGGVRTALA 172


>gi|16077368|ref|NP_388181.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221308115|ref|ZP_03589962.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221312438|ref|ZP_03594243.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221317371|ref|ZP_03598665.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221321636|ref|ZP_03602930.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321313969|ref|YP_004206256.1| glycine betaine ABC transporter permease [Bacillus subtilis BSn5]
 gi|1171920|sp|P46921|OPUAB_BACSU RecName: Full=Glycine betaine transport system permease protein
           opuAB
 gi|984804|gb|AAC43456.1| transmembrane protein [Bacillus subtilis]
 gi|1805371|dbj|BAA08933.1| glycine betain/L-proline transmembrane protein [Bacillus subtilis]
 gi|2632585|emb|CAB12093.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291482686|dbj|BAI83761.1| glycine betaine ABC transporter, permease [Bacillus subtilis subsp.
           natto BEST195]
 gi|320020243|gb|ADV95229.1| glycine betaine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L++++IS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT      +  +P DL E + +F  +  Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTAQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|228946522|ref|ZP_04108837.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228813135|gb|EEM59441.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 10/180 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FR      I   + I +G  +GF       + P  Q+L   P     PL V    +
Sbjct: 83  SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+  G  + +  NV  G     +   +VA     +  +    +ILP   
Sbjct: 143 GETSK----VLLIADGAFFPLYVNVFLGIRGVDSKLFDVARVLEFSKRKLITKLILPATL 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I  
Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252


>gi|188586238|ref|YP_001917783.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350925|gb|ACB85195.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 278

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L+A +++L        LA+K+  +  ++ P+LD MQ++P   +L   V++F + L PG 
Sbjct: 102 ILTAGIVALGLGIPIGILASKNEVVNTIVRPVLDFMQTMPAFVYLIPAVIFFSLGLVPGV 161

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +       IFA+    +    F + Q    + +++ E  R+F  +  Q  + + +P ++P
Sbjct: 162 I----ATVIFAM-PPAIRLTNFGIRQ----VDKEVIEAGRAFGSTSSQLLFKVQLPLAVP 212

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               G+   +M+S+S     VV + MI  G       G+G+ +   I + D+
Sbjct: 213 TIMAGVNQTIMLSLS----MVVIASMIGAG-------GLGNIVLRGITQLDI 253


>gi|253686557|ref|YP_003015747.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251753135|gb|ACT11211.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 532

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 29/219 (13%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
           +P ++V  +PI+L             LR+       +    V  +L   +RRL  + +P+
Sbjct: 71  IPEELVHQLPISL-------------LRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPL 117

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
             ++  IP L ++   ++          IG  L  +  + +  V  +T      +   P+
Sbjct: 118 FTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQ 169

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS RL       YL +P  +P ++  + ++ S GW  ++A E++   +      
Sbjct: 170 KLHEMARSLRLPPAAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------ 223

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
           G+G Y+ +  ++  +L +++  + ++G++ F  +++L +
Sbjct: 224 GLG-YLLVQSRQLFMLDLVFVCILIIGILGFAGERVLLK 261



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG    P    E+A S  +    + RY+ILP + PY +TG   A    W A I  E+ + 
Sbjct: 162 AGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 220

Query: 530 GHIHLRTTGLGAYIAESTE 548
                 + GLG  + +S +
Sbjct: 221 -----SSEGLGYLLVQSRQ 234


>gi|330961885|gb|EGH62145.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 21/152 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTML 249
           GIG Y+A+  +E    D++    +LYA+L  L
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKL 238



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|291617525|ref|YP_003520267.1| OpuCB [Pantoea ananatis LMG 20103]
 gi|291152555|gb|ADD77139.1| OpuCB [Pantoea ananatis LMG 20103]
 gi|327393962|dbj|BAK11384.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Pantoea ananatis AJ13355]
          Length = 215

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      T+  F  + P     GK IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGIATVVLTIPTIALFGLMIPLFSLIGKGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            N+P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|227544762|ref|ZP_03974811.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300908991|ref|ZP_07126454.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
 gi|227185248|gb|EEI65319.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300894398|gb|EFK87756.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
          Length = 221

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 20/220 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420
           +G I+ +F      Y  ++G   +  VV L+I + II +P+G       +I S+I+P   
Sbjct: 7   LGQIIQYFQTNSGQYWQYVGQHIILTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 58

Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
               FAQLL   P+     L++  +    +   + L +L +      +L N I G +   
Sbjct: 59  FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 114

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535
             +KEV  +  +   R  R I +P   PY + G  +       +A++ + + + G   L 
Sbjct: 115 PLYKEVGIALGMDQRRLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 174

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TGLG Y       G+    +L +L M  F   + +   H
Sbjct: 175 FTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLIRKVQKH 214


>gi|254461891|ref|ZP_05075307.1| glycine betaine/L-proline transport system permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678480|gb|EDZ42967.1| glycine betaine/L-proline transport system permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 517

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II IP+G++   RP   S IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 349 IIGIPLGMFAARRPRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 405

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF    W     + LP   P    G
Sbjct: 406 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAG 455


>gi|261409048|ref|YP_003245289.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261285511|gb|ACX67482.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 277

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 27/170 (15%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +++A +IS++        AA S+    V++P+LD MQ++P   +L   V +F + + PG 
Sbjct: 94  VITAALISVILGVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           +     + IFAI        T  + +  +  +  +L E + +F  +  QK + + +P +M
Sbjct: 154 IA----SVIFAI------PPTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           P    G+   +M+S+S          M+V+  ++I   GIG+ +  A+ +
Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242


>gi|28872427|ref|NP_795046.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213971162|ref|ZP_03399280.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301382291|ref|ZP_07230709.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061543|ref|ZP_07253084.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302134778|ref|ZP_07260768.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855682|gb|AAO58741.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924031|gb|EEB57608.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|331017056|gb|EGH97112.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++    +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|56962846|ref|YP_174572.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56909084|dbj|BAD63611.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 278

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 27/173 (15%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L+A +IS++       L AK+ R   ++ P+LD MQ++P   +L   V +F + + PG 
Sbjct: 97  VLTACLISVVIGVPVGILMAKNDRTEAIIKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGV 156

Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188
           V     + IFA+  T ++ N+       +  +  +L E + +F  +G QK + + +P + 
Sbjct: 157 VA----SVIFAMPPTVRMTNL------GIRQVSTELIEAADAFGSTGTQKLFKVQLPMAR 206

Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              M G+  + M+++S     VV + MI  G T     GIG  +  A+ + ++
Sbjct: 207 GTIMAGINQSTMLALS----MVVIAAMI--GAT-----GIGQVVYSAVGQNNI 248


>gi|222102602|ref|YP_002539641.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739203|gb|ACM39936.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 65  ASRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           AS  TL +++  V IS+L  F    LA++ RR+  ++ P+LDIMQ++P   +L   V+ F
Sbjct: 90  ASMQTLALVTVSVCISVLIAFPLGILASRHRRVETIIRPLLDIMQTVPPWVYLIPAVMIF 149

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G+V      AI A     +  M      +   +P+DL E+ ++   S     + +
Sbjct: 150 SL---GRV-----PAIIATIVYGIPPMLRLTTLAFNQVPKDLLELGQATGASPRAILFKI 201

Query: 184 GVPFSMPGLVWNM 196
            +P + P L+  +
Sbjct: 202 EIPAATPTLLVGL 214


>gi|163758500|ref|ZP_02165588.1| glycine betaine/L-proline transport system permease, putative
           [Hoeflea phototrophica DFL-43]
 gi|162284789|gb|EDQ35072.1| glycine betaine/L-proline transport system permease, putative
           [Hoeflea phototrophica DFL-43]
          Length = 513

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   RP   S IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 345 LIGIPLGMFCARRPRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P+  +E A SF    W     + LP   P    G
Sbjct: 402 GGTPVVRLTVL-GLRGVPDSVREAAISFGANKWYLLTRVDLPLASPSIRAG 451


>gi|304392892|ref|ZP_07374823.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
 gi|303294890|gb|EFL89259.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
          Length = 523

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 30/200 (15%)

Query: 68  TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +L +A  +S+L       L A+  RL  V+ PI+D MQ++P   F+   + +F   
Sbjct: 341 TTLALLGTAACLSILIGIPLGMLCARRHRLYAVIQPIMDFMQTMPAFVFMIPVIAFFGTG 400

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183
            P  V+           T+ ++  T  +  +   L  +P  + E + SF  S W     +
Sbjct: 401 KPAAVV-----------TTMIFGGTPVVRLTVLGLRGVPEAVREAAISFGASKWYLLTRV 449

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +P + P    G+   +M+S++          M+VV  ++I   G+G  +  A++  ++ 
Sbjct: 450 DLPLAAPSIRAGINQTIMLSLA----------MVVVA-SLIGAKGLGEDVLEALQYANVG 498

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             + A  ++L    + D+++
Sbjct: 499 QGILAGFSILFCAMILDRIV 518



 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G+    R  + + IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 355 LIGIPLGMLCARRHRLYAVIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 411

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF  + W     + LP   P    G
Sbjct: 412 GGTPVVRLTVL-GLRGVPEAVREAAISFGASKWYLLTRVDLPLAAPSIRAG 461


>gi|297197996|ref|ZP_06915393.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
 gi|197715001|gb|EDY59035.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
          Length = 665

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L +  L Q +  T    LSA++++LLF       A  S R+  ++ P LD MQ++P + +
Sbjct: 148 LGLQGLWQESMDTLSLTLSAVLVALLFAIPLGVWAGLSERVNRIVTPFLDFMQTMPTMVY 207

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L    ++F+       IG   A I  +  +    +  + + ++ ++P    E + S   +
Sbjct: 208 LAPLTLFFL-------IGGASATIATVIYAAPPALRITAH-AIRSVPPTTVEAAESMGAT 259

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P S   +V  +  +       ++A+  +V    +I  PG+G  +  A++ 
Sbjct: 260 RRQSLLKVLLPMSRRTVVMGVNQT-------IMAALAMVTIAALIDAPGLGKTVVQALQS 312

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+     A L ++ +  + D++
Sbjct: 313 LDVGTAFNAGLAIVVMAIVLDRV 335


>gi|170735077|ref|YP_001774191.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169821115|gb|ACA95696.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 238

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  +IP L  L   +  F        IG  + AI A+F + +  +T + Y+ + N+P
Sbjct: 82  VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E ++   ++GWQ    + +P ++P +V  +  +++
Sbjct: 134 AALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALA 172


>gi|83716128|ref|YP_439164.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167577605|ref|ZP_02370479.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis TXDOH]
 gi|167615750|ref|ZP_02384385.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis Bt4]
 gi|257142284|ref|ZP_05590546.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis E264]
 gi|83649953|gb|ABC34017.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis E264]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+       +T      + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|78044059|ref|YP_359638.1| phosphate ABC transporter permease [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996174|gb|ABB15073.1| phosphate ABC transporter, permease protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 289

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            +L ++PR LEE S +   + WQ  W++ +P + PG++  +++ M+      +A +M V+
Sbjct: 164 DALRSVPRSLEEASYALGATRWQTIWHVLLPAAAPGIITGLVLGMARAIGETMAVQM-VI 222

Query: 216 GDT 218
           G+T
Sbjct: 223 GNT 225


>gi|225619832|ref|YP_002721089.1| putative ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214651|gb|ACN83385.1| putative ABC transporter, permease protein [Brachyspira
           hyodysenteriae WA1]
          Length = 242

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 42/217 (19%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S  +FPNI ++LA          L+  I E +  +D++                  + LR
Sbjct: 29  SEILFPNIQNILAK---------LIEIISEKSFYKDLLS-----------------SLLR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L    +S L  F+    A     L   L+PI++ +++IP +  +   +++F  N  P  
Sbjct: 63  VLITFALSFLSAFIIGISAGIFLPLRYTLIPIINFIRTIPTIPLILVAIIWFDNNTVP-- 120

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            I   +  IF I    + N        + N+ + L E+S S+ +S   +   L +P+  P
Sbjct: 121 -IFVSMLVIFPIIYDSITN-------GIINVDKKLIEMSISYNVSIKTQIINLYIPYIKP 172

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +   +  SM   W  ++A+E++      +P  GIG+
Sbjct: 173 YIFTGISQSMGITWKSILAAEIL-----ALPALGIGT 204


>gi|254486686|ref|ZP_05099891.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043555|gb|EEB84193.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 264

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 18/155 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158
           LVP++  +  IP +  L   V++F         G + A+ FA+     +  T  + Y ++
Sbjct: 107 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKFALIAFGTFTPTVVATYAAV 157

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF L+ W     + +P +MPG++  + +S++     +VA+EM+  G  
Sbjct: 158 DNVDRSLIRMGQSFGLTWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 215

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251
                GIG+YI  A    DL  +     +L++LGV
Sbjct: 216 Y----GIGAYILEAGSLYDLERLFAGVVILSVLGV 246



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V   I + I I VG+ IG   ++ + + P    L   P     PL    V ++ 
Sbjct: 75  SLSRLAVGATIGASIGIAVGVMIGLFSYVRAGLVPLVAALFPIPKIALLPL---FVIWFG 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++     +L+  FGT    +    A           +  SF +T W   R I+LPG  P 
Sbjct: 132 IDEASKFALIA-FGTFTPTVVATYAAVDNVDRSLIRMGQSFGLTWWSIVRKIVLPGAMPG 190

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+    +      G+GAYI E+        +  GV+I+   
Sbjct: 191 ILSGLRISLAIAIILLVAAEMLGAEY------GIGAYILEAGSLYDLERLFAGVVILSVL 244


>gi|254386759|ref|ZP_05002051.1| ABC transporter permease [Streptomyces sp. Mg1]
 gi|194345596|gb|EDX26562.1| ABC transporter permease [Streptomyces sp. Mg1]
          Length = 307

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 375 DVLYVIWLGCI-------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           D L  +WLG         ++ R ++  ++A  I  P+G+ +     + + I P  Q L +
Sbjct: 90  DSLADMWLGGTLLEVIWTSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQS 149

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+  + P     V ++ LN  +  +++++ G    I   +++G    P  F     +  
Sbjct: 150 LPSVAWVP---PAVLWFGLNDAMMYTVILL-GAVPSIANGLVSGIDQVPPLFLRAGRTLG 205

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            TG R  R++++P   P Y+ G       +W + + +E+
Sbjct: 206 ATGLRGARHVVMPAALPGYLAGLKQGWAFSWRSLMAAEI 244


>gi|167041562|gb|ABZ06310.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_008G09]
          Length = 295

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 23/172 (13%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R+   ++P+LD+MQ+IP   +L   +   M L  GKV G     I+A+    +  +
Sbjct: 126 ARSTRVQAAILPVLDMMQTIPSFVYL---IPILMLLGIGKVPGLIAVCIYAV--PPIIRL 180

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  + ++  E   +F  + WQ+   + +P ++P    G+   +MM+++     
Sbjct: 181 T---NLGIREVDKEALEAIDAFGATAWQRLTKVQIPLALPTIFAGVNQTIMMALA----- 232

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 +VV  ++I + G+G  I  AI  Q L   L   L ++ +  ++D++
Sbjct: 233 ------MVVIASMIGVRGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRI 278


>gi|310824496|ref|YP_003956854.1| glycine betaine/l-proline ABC transporter permease and
           substrate-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397568|gb|ADO75027.1| Glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 510

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKVIG 133
           ++V S+L       LAA+  RLG +++ +  I+Q++P L  L F + +  +   P     
Sbjct: 315 SLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTRP----- 369

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+F   +  +  +    L  I  DL E + +  L    + W + +P + P L+
Sbjct: 370 ----AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSLL 425

Query: 194 WNMMMS 199
             +  +
Sbjct: 426 AGIQTA 431


>gi|89076527|ref|ZP_01162838.1| ABC-type proline/glycine betaine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|330448148|ref|ZP_08311796.1| choline ABC transporter, permease protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|89047803|gb|EAR53400.1| ABC-type proline/glycine betaine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|328492339|dbj|GAA06293.1| choline ABC transporter, permease protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 280

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       ++A    L  ++ PILD+MQ++P   +L  T+V 
Sbjct: 91  QEMLETFVLVFAATSISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P DL E  ++F  S  +   
Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEDLIEAGKAFGASRMKLLL 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275


>gi|315647564|ref|ZP_07900666.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315277003|gb|EFU40344.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 243

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV++   + S+I IP G+ IG    I    +PF   +   P   F  L +      
Sbjct: 44  ISSYRVLLGWTLGSLIAIPAGLVIGKVGTIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG 103

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+++ T + ++ N + G  +   D    A S   + W+   ++I+P   P
Sbjct: 104 ETSK----VMLIMYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVIIPATVP 159

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           Y  TG   A G ++ A I +E+
Sbjct: 160 YMFTGIRLAMGTSFMAIIGAEM 181


>gi|229844555|ref|ZP_04464695.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 6P18H1]
 gi|229812804|gb|EEP48493.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 6P18H1]
          Length = 245

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|15678941|ref|NP_276058.1| anion transport system permease protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622018|gb|AAB85419.1| anion transport system permease protein [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 269

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ I+D       +HS+      +T+  L  M+ +LL  +   +L+  S R   ++  +L
Sbjct: 37  PQSILDSFRSADMIHSVKLSLLTSTITTLIVMLSALLIAY---SLSEDSFRGKSIVKTVL 93

Query: 105 DIMQSIP-------ILGFLTFT-VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           DI  ++P       +L FL  T + Y M+    +++  +L  I A F   +       Y 
Sbjct: 94  DIPIALPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLGVICAQFFVSLPYTVRICYS 153

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG--GWFFVVASEMIV 214
           + CNI R L+ VSRS   + ++ F  + +P S  G++   +++ S   G F  V   +IV
Sbjct: 154 TFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATIITFSRCIGCFGAV---LIV 210

Query: 215 VGDT 218
            G T
Sbjct: 211 AGGT 214


>gi|302188523|ref|ZP_07265196.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|284166069|ref|YP_003404348.1| binding-protein-dependent transporters inner membrane component
           [Haloterrigena turkmenica DSM 5511]
 gi|284015724|gb|ADB61675.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 279

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 5/141 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++F  V  +++ +   I VG+ +G+   +   ++P  +LL   P   +    V     +H
Sbjct: 91  SLFHYVPGLVVGNAAGIAVGVAMGWSTRVDDYLRPVVRLLRPIPPLAWVVFAVLWFGIHH 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504
                  + ++  G  W  L+   +G       + EVAS   + + W+  R ++LP   P
Sbjct: 151 TGA----AFIVFVGAFWITLYGAYSGVEGVSRGYIEVASGLGVESDWQMIRLVVLPAAAP 206

Query: 505 YYVTGAITACGGAWNASIVSE 525
             +T   T+ G  W   + +E
Sbjct: 207 SVLTAVRTSIGRCWMIVVGAE 227



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S R+   L P++ +++ IP L ++ F V++F   + G        A F +F    W   +
Sbjct: 116 STRVDDYLRPVVRLLRPIPPLAWVVFAVLWFGIHHTG--------AAFIVFVGAFWITLY 167

Query: 153 SMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             Y  +  + R   EV+    + S WQ    + +P + P ++  +  S+   W  VV +E
Sbjct: 168 GAYSGVEGVSRGYIEVASGLGVESDWQMIRLVVLPAAAPSVLTAVRTSIGRCWMIVVGAE 227

Query: 212 M 212
           +
Sbjct: 228 L 228


>gi|260769404|ref|ZP_05878337.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
 gi|260614742|gb|EEX39928.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
          Length = 368

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ PILD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   +F  S  Q  + + +P +MP    G+   +M+S+S     
Sbjct: 227 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|227113615|ref|ZP_03827271.1| glycine betaine transporter membrane protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 417

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 233 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 287

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 288 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 340

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 341 VVIASMIAVG-------GLGQMVLRGIGRLDM 365


>gi|114705345|ref|ZP_01438253.1| Binding-protein-dependent transport systems inner membrane
           component [Fulvimarina pelagi HTCC2506]
 gi|114540130|gb|EAU43250.1| Binding-protein-dependent transport systems inner membrane
           component [Fulvimarina pelagi HTCC2506]
          Length = 305

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 13/139 (9%)

Query: 68  TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL M+ +A+V  ++        AA+S +   +L PILDIMQ+IP   +L   V+ F   
Sbjct: 90  TTLSMIITAVVFCIVLGVPLGIAAARSDKFLSILRPILDIMQTIPSFVYLVPIVMLF--- 146

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G     IFA+    +  +T      + N+  DL E +++F  +  Q  W + +P
Sbjct: 147 GVGTVPGVIATIIFAL--PPIIRLT---NLGIRNVRGDLIEAAKAFGSTPRQILWEVQLP 201

Query: 187 FS----MPGLVWNMMMSMS 201
            +    M GL   +M+++S
Sbjct: 202 LALRTIMAGLNQTLMLALS 220


>gi|78060663|ref|YP_367238.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965213|gb|ABB06594.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 238

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  +IP L  L   +  F        IG  + AI A+F + +  +T + Y+ + N+P
Sbjct: 82  VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPITRNTYEGMKNVP 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E ++   ++GWQ    + +P ++P +V  +  +++
Sbjct: 134 AALREAAKGIGMTGWQSLVRVELPDALPIIVGGVRTALA 172


>gi|148256186|ref|YP_001240771.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408359|gb|ABQ36865.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 286

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++  +   L    L Q+A  + LR+L    +              SRR+   + P+ 
Sbjct: 71  PADVLHTLNEMLASGELAQHAGISLLRVLLGFAVGAGAGLALGAAMGLSRRVDDHVRPLF 130

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +  +P L ++   ++          IG E   I  I  +    +  +    + N+PR 
Sbjct: 131 TAIAQVPALAWIPLAMLLLG-------IG-ETLKIVVIAKAAFVPVAMNTSAGIANVPRA 182

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L EV  +FR S  Q   ++ +P ++P +   +   ++  W  +V+ E++   +      G
Sbjct: 183 LVEVGETFRFSPLQMLRHVVLPGAVPPIFTGLRYGLTHAWIALVSVELLASSE------G 236

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  +    +   L  +L AM+ +  + F  D+LL
Sbjct: 237 LGYLLVWGRQMFWLDTVLVAMIVIGIIGFASDKLL 271


>gi|163859331|ref|YP_001633629.1| ABC transporter permease protein [Bordetella petrii DSM 12804]
 gi|163263059|emb|CAP45362.1| ABC transporter permease protein [Bordetella petrii]
          Length = 291

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LP  A ++   +L   V  +   FV  TLA  S RLG  ++  L  M +      L   
Sbjct: 86  ELPSRALQSLQVLLKGYVAGIALAFVLTTLAV-STRLGRDVLSTLTAMFNPLPAIALLPL 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + +  L  G +       +F +  S +W +  ++Y     +P  L    R++ L G + 
Sbjct: 145 ALLWFGLGEGSL-------VFVLVHSVLWALALNIYAGFLAVPETLRMAGRNYGLKGPRY 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            + + VP ++P +V  + +  +  W  ++A+E++
Sbjct: 198 VFGILVPAALPAIVAGLRIGWAFAWRTLIAAELV 231


>gi|116492237|ref|YP_803972.1| ABC-type phosphate transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102387|gb|ABJ67530.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 302

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 18/175 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYAT------LAAKSRRLGMVLVPILDIMQSIP 111
           V +LP      ++ +LSA+   L   F  AT      +A K  R   +L P+++++  IP
Sbjct: 77  VGALPMIVGSFSVTVLSAL---LAAPFAIATAIFMVDIAGKRGR--KILQPVIELLVGIP 131

Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLE 166
             + GF+  TVV  +   ++ G   G  L+  F +F   +  +T SMY  SL  +P+   
Sbjct: 132 SVVYGFIGLTVVVPFTRTVFGGTGFGI-LSGTFVLFVMVLPTVT-SMYVDSLKAVPQFYR 189

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           E S +   + WQ  + + +  S+PGL+  ++  M+  +   +A +M++   +++P
Sbjct: 190 EASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNASILP 244


>gi|329936399|ref|ZP_08286164.1| hypothetical protein SGM_1656 [Streptomyces griseoaurantiacus M045]
 gi|329304195|gb|EGG48076.1| hypothetical protein SGM_1656 [Streptomyces griseoaurantiacus M045]
          Length = 304

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 14/119 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI--FTSQVWNMTFSMYQSLC 159
           P+  ++++   LGF TF  V    + PG      LA +F I  F +        MY +L 
Sbjct: 144 PVSSLLET---LGFHTFGEV----IAPGN-----LALLFTIIAFWTGAGGWIVVMYGALN 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           NIP+D+ E +R    +GWQ  W + +P     +V+ ++++ +GG    V  +++ +  T
Sbjct: 192 NIPKDVMEAARIDGANGWQTAWRVQIPLLRKWIVYMVILAFAGGAQLFVEPQLLSLAST 250


>gi|239628147|ref|ZP_04671178.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518293|gb|EEQ58159.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 251

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 53/246 (21%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E F    + +   Y + +FW  V         WQ+     N   + ++++V   G + M 
Sbjct: 3   ETFFMNQNTRIRKYFIWLFWIAV---------WQA----ANMLIHNNIIFV---GPVDMV 46

Query: 389 RVVVLIIIASIIWIPV-----GIWIGFR----------------PHISSKIQPFAQLLAA 427
           + ++ ++  S  W  V      I IGF                 P +   ++P   L+ +
Sbjct: 47  KALLELVRDSSFWASVFNSFAKISIGFLGAFILSILLGCLAYAVPLVKDLLEPMMMLIKS 106

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   F  L +  +  ++L   ++ S L++      I  + ++G         E+A  F 
Sbjct: 107 VPVASFVILALIWIGSHNLA--VFTSFLVVVPM---IYVSTLSGLEHTDRKLLEMAMVFR 161

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS-----------WGHIHLRT 536
           +   +  RYI +P + PY ++G  TA G +W + + +EV             +  ++L T
Sbjct: 162 MPLLKQVRYIYIPAVLPYLISGCRTALGMSWKSGVAAEVIGIPEGSIGEQLYYSKLYLDT 221

Query: 537 TGLGAY 542
            GL A+
Sbjct: 222 AGLFAW 227


>gi|299822484|ref|ZP_07054370.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Listeria grayi DSM 20601]
 gi|299816013|gb|EFI83251.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Listeria grayi DSM 20601]
          Length = 281

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124
           ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V +F +
Sbjct: 94  TQTLTLVLTSSLIALVVGVPLGIWMAKSEIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            + PG V     + IFA+  T ++ N+       +  + ++L E + SF  + WQK + +
Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSKELVEAADSFGSTPWQKLFKV 203

Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P +    M G+  ++M+++S          M+V+  ++I   G+G+ +  A+   D
Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250


>gi|158335979|ref|YP_001517153.1| ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158306220|gb|ABW27837.1| ABC transporter, permease protein, putative [Acaryochloris marina
           MBIC11017]
          Length = 290

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/216 (19%), Positives = 92/216 (42%), Gaps = 10/216 (4%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G A+  + +  +    +D   +     ++ FRV    ++ASI+ +P+GI +G    + S
Sbjct: 71  VGTAFVDLWHQYDTLNQKDTYPLFQATLMSCFRVGSGFLLASILAVPMGIGMGAFASLRS 130

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
             +P   ++   PA  F PL+   + Y  L     ++L+ I GT ++ +  ++      P
Sbjct: 131 LGEPIIGIVRYMPAPAFIPLL---LIYLGLEEEPKIALIFI-GTIFFNVLMIMDAVKFVP 186

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E   +      +    +I P + P  +         +WN  +V+E+ +        
Sbjct: 187 KELIETTYTLGGNRTQVLLQVITPYVIPRIIDAFRVNMAASWNLVVVAELVA------AD 240

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            GLG  I  +    S  ++ + ++++     +L+ F
Sbjct: 241 EGLGKRILLAQRFNSVDKIFVCLIVLGLLGFSLDLF 276


>gi|88799388|ref|ZP_01114966.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
 gi|88777927|gb|EAR09124.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
          Length = 319

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+  VI  +  F+ A LA KSR L + LVP+ + + +IPI+G     V++F   +P K 
Sbjct: 126 VLAGYVIGCVSGFIVAQLAVKSRFLELGLVPLGNFVSAIPIVGIAPIMVMWFGFDWPSKA 185

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +   F +F +     T +  QS+  + +DL     ++     QKF    +P ++P
Sbjct: 186 AVIVVMTFFPMFIN-----TLTGLQSVDALHKDLMH---TYAAKSAQKFTTTQLPQALP 236


>gi|84385167|ref|ZP_00988199.1| ABC transporter permease protein [Vibrio splendidus 12B01]
 gi|84379764|gb|EAP96615.1| ABC transporter permease protein [Vibrio splendidus 12B01]
          Length = 271

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   Y+ +P ++P L   + +++      V+A    VVG+
Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W N+
Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271


>gi|329928981|ref|ZP_08282791.1| glycine betaine transport system permease protein opuAB
           [Paenibacillus sp. HGF5]
 gi|328937233|gb|EGG33660.1| glycine betaine transport system permease protein opuAB
           [Paenibacillus sp. HGF5]
          Length = 277

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 27/170 (15%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +++A +IS++        AA S+    V++P+LD MQ++P   +L   V +F + + PG 
Sbjct: 94  VITAALISVILGVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           +     + IFAI        T  + +  +  +  +L E + +F  +  QK + + +P +M
Sbjct: 154 IA----SVIFAI------PPTIRLTRLGINQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           P    G+   +M+S+S          M+V+  ++I   GIG+ +  A+ +
Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242


>gi|126735115|ref|ZP_01750861.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseobacter sp. CCS2]
 gi|126715670|gb|EBA12535.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseobacter sp. CCS2]
          Length = 277

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 25/193 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +LS+ V+ +          A   R    + P+LD+MQ++P   +L   +V+F + + PG 
Sbjct: 100 VLSSCVVCMGLGVPIGIFLAHRPRAYQAVSPVLDLMQTLPAFVYLIPAIVFFGLGMVPG- 158

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   +FA     +       Y  + N P  L E + +F  +  Q+ W + +P+++P
Sbjct: 159 --------LFATVIFVLPAPIRLTYLGVSNTPTSLLEAAEAFGATPAQRLWKVELPYAVP 210

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
               GL   +M+S+S           +VV    +   G+G  +  A+   D      + L
Sbjct: 211 QIMAGLNQVIMLSLS-----------MVVISAYVGANGLGKPVVQALGRNDPGLGFESGL 259

Query: 247 TMLGVIFLYDQLL 259
            ++ V  + D++L
Sbjct: 260 VIVAVAIMLDRML 272


>gi|71083501|ref|YP_266220.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062614|gb|AAZ21617.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 501

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%)

Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W+  +T   ++    + SI I IP+GI+   R    S I+P    +   PA VF   ++ 
Sbjct: 313 WVKAMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVF---MIP 369

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++++       + + MIFG    +   V+ G    P   +E A ++  T W   R + L
Sbjct: 370 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 428

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G       +    +V+ +       +   GLG  + E+ +  +  + +L  
Sbjct: 429 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 481

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 482 IAILFVALILDR 493



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 16/193 (8%)

Query: 68  TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +L +A V+S+          A+ +R   ++ PI+D MQ++P   F+   + +F   
Sbjct: 318 TTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFGT- 376

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV    +  IF    + V  +T      L  +P  + E + ++  + W     + +P
Sbjct: 377 --GKVAAVIITMIFG--GTPVVRLT---VLGLRGVPETIREAAIAYGATKWYLLRKVDLP 429

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P ++  +  +       V+ S  +VV  ++I   G+G  +  A++  ++   + A +
Sbjct: 430 LATPSILAGVNQT-------VMLSLAMVVVASLIGAKGLGQDVLEALQYANVGQGILAGI 482

Query: 247 TMLGVIFLYDQLL 259
            +L V  + D+++
Sbjct: 483 AILFVALILDRVV 495


>gi|310818711|ref|YP_003951069.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
 gi|309391783|gb|ADO69242.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
          Length = 595

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + +L A  +SLL       +AA+  R   VL  +LD+MQ+IP   +L  T++ 
Sbjct: 404 QPTMETLVLVLVATALSLLLGVPLGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLML 463

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG      L+ +  +  + +  +T   Y  + ++P+++ E   +F     Q   
Sbjct: 464 FGLGVVPGL-----LSTVVFVLPAPI-RLT---YLGITSVPKEMIEAGEAFGARPLQLLV 514

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++    + G+   +M+S+S     VV + ++  G       G+GS +  A+   D
Sbjct: 515 KIELPYARKAILEGVTQALMLSLS----MVVIAALVGAG-------GLGSRVVRALNTVD 563

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  L D++   P
Sbjct: 564 IRQGFEAGLVIVILAILLDRMFKHP 588


>gi|300855828|ref|YP_003780812.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
           13528]
 gi|300435943|gb|ADK15710.1| predicted ABC transporter, permease component [Clostridium
           ljungdahlii DSM 13528]
          Length = 250

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ I+++  I I  G+  G    I   ++P    + + P  V   ++++ V +  
Sbjct: 64  SILRVIIGILLSIAIGIITGVIAGMNKSIEELLEPLVVTVKSTP--VISIIIIALVWFNS 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  ++ ++L+ F     I  NVI G  +      ++AS +++      + I LP I  Y
Sbjct: 122 SNVVIFTAILICFPI---IYTNVIEGIKSVDKYLIQMASVYNVKQKYVIKDIYLPSIKNY 178

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
            ++G     G  W  S+ SEV S
Sbjct: 179 IISGIFMCLGIGWKVSVASEVLS 201


>gi|227329900|ref|ZP_03833924.1| glycine betaine transporter membrane protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 415

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 231 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 285

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 286 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 338

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 339 VVIASMIAVG-------GLGQMVLRGIGRLDM 363


>gi|91762081|ref|ZP_01264046.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717883|gb|EAS84533.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 501

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%)

Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W+  +T   ++    + SI I IP+GI+   R    S I+P    +   PA VF   ++ 
Sbjct: 313 WVKAMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVF---MIP 369

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++++       + + MIFG    +   V+ G    P   +E A ++  T W   R + L
Sbjct: 370 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 428

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G       +    +V+ +       +   GLG  + E+ +  +  + +L  
Sbjct: 429 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 481

Query: 560 LIMCCFVLALNR 571
           + +    L L+R
Sbjct: 482 IAILFVALILDR 493



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 16/193 (8%)

Query: 68  TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +L +A V+S+          A+ +R   ++ PI+D MQ++P   F+   + +F   
Sbjct: 318 TTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFGT- 376

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV    +  IF    + V  +T      L  +P  + E + ++  + W     + +P
Sbjct: 377 --GKVAAVIITMIFG--GTPVVRLT---VLGLRGVPETIREAAIAYGATKWYLLRKVDLP 429

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P ++  +  +       V+ S  +VV  ++I   G+G  +  A++  ++   + A +
Sbjct: 430 LATPSILAGVNQT-------VMLSLAMVVVASLIGAKGLGQDVLEALQYANVGQGILAGI 482

Query: 247 TMLGVIFLYDQLL 259
            +L V  + D+++
Sbjct: 483 AILFVALILDRVV 495


>gi|237736477|ref|ZP_04566958.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium mortiferum ATCC 9817]
 gi|229421519|gb|EEO36566.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium mortiferum ATCC 9817]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 10/177 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++   I+    +P+GI  G +P +    +   + +   P     P+++     
Sbjct: 54  AISLRRVIIGFGISIFFALPLGIVFGIKPKLYEYFKNLLEFMRHVPPLALVPMIILWFGI 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +++I  + + I  N + G  +    + EV   F++T    ++ IILP   
Sbjct: 114 GELSK----IVIIILASFFPIFLNSLKGIVSCDEKYIEVGKVFNLTHMEIFKKIILPSAI 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           P  + G     G +W A I +E+ +       ++G+G  I ++ +      VV+G+L
Sbjct: 170 PDILLGLKLGLGYSWRAIIAAELIA------SSSGIGYLILDAQQISRSDIVVVGIL 220


>gi|146276813|ref|YP_001166972.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555054|gb|ABP69667.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 412

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GKVI         +F + +W M  +    + ++
Sbjct: 255 PIVEFMRPVPPLALIPLVIIWFGIGEVGKVI--------LLFLASLWIMAIAARSGVTSV 306

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S  Q  W++ VP S+P L     ++M   W  VVA+E++        
Sbjct: 307 RLAKVHAAYSLGASRPQLLWHVIVPHSLPDLFTGARVAMGVCWGTVVAAELVAAEK---- 362

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G G  I  A K Q    +L  ++ ++G+I     +L R
Sbjct: 363 --GAGMMIIAASKFQQTDVVLMGVI-LIGLIGYGIDILMR 399


>gi|325003251|ref|ZP_08124363.1| sulfonate/nitrate/taurine ABC transporter permease [Pseudonocardia
           sp. P1]
          Length = 279

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 10/131 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  Q+L   P     PL +       L P +   LL+  G  + +  NV AG      
Sbjct: 114 VDPPVQMLRTLPHLGLVPLFILWFGIGEL-PKV---LLVALGVLFPMYLNVHAGVRGVDP 169

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E AS    T     R+++LPG  P  +TG   A G AW + IV+E  S         
Sbjct: 170 KLLEAASVSGFTRAERLRHVVLPGAMPSTLTGLRLALGIAWLSIIVAETTSA------DA 223

Query: 538 GLGAYIAESTE 548
           GLG  I  + E
Sbjct: 224 GLGYMIMNARE 234


>gi|237802225|ref|ZP_04590686.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025082|gb|EGI05138.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 21/153 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLG 250
           GIG Y+A+  +E    D++    +LYA+L  L 
Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA 239



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|325290914|ref|YP_004267095.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966315|gb|ADY57094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 258

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 54/151 (35%), Gaps = 26/151 (17%)

Query: 420 PFAQLLAAF---PANVFFPLVVSCVSYYHLNPNLWLSLLMIF--------------GTQW 462
           P   LL  F      V  P + +C     LNP   + + MIF               T W
Sbjct: 80  PLGFLLGTFFKSTEKVLLPFMRAC---EKLNPFAIIPIFMIFFGIGTAEKVVVIFWSTLW 136

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +LFN +AGA     +   +  S   T W   R +I P   P    G   A   A+   I
Sbjct: 137 PVLFNTMAGARNIDQNLLRMVRSMGATRWELLRKVIFPYTLPNIFIGIEFAAQVAFFMII 196

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            SEV         +TGLG Y   S  K   P
Sbjct: 197 ASEVIG------ASTGLGWYYTSSATKYDLP 221


>gi|296332656|ref|ZP_06875116.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305673000|ref|YP_003864672.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149936|gb|EFG90825.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305411244|gb|ADM36363.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   +L++++IS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT      +  +P DL E + +F  +  Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTAQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|290956488|ref|YP_003487670.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260646014|emb|CBG69105.1| putative transport system integral membrane protein [Streptomyces
           scabiei 87.22]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    L + P+  + P   + V +  L P++  +++++ G    I   +++G    P 
Sbjct: 133 IGPILSGLQSLPSVAWVP---AAVVWLGLEPSVMYTVILL-GAVPSIANGLVSGIDQVPP 188

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRT 536
            F     +   TG +   +I++P   P YV G       +W + + +E +A    I    
Sbjct: 189 LFLRAGRTLGATGLKGTWHIVMPAALPGYVAGLKQGWAFSWRSLMAAEIIAKAPDIG--- 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +GLG  +       S P+V L + ++    +A++  L+ PL
Sbjct: 246 SGLGQMLEAGRTNSSMPQVFLAIFLILIVGIAIDLLLFSPL 286



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 16/207 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L  L+A+ I      + A +      +G    PIL  +QS+P + ++   VV+   
Sbjct: 103 SRGLLGFLAALAIGTPLGLLVARVRVVRAAIG----PILSGLQSLPSVAWVPAAVVW--- 155

Query: 126 LYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +G E + ++  I    V ++   +   +  +P       R+   +G +  W++ 
Sbjct: 156 ------LGLEPSVMYTVILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGATGLKGTWHIV 209

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++PG V  +    +  W  ++A+E+I     +    G+G  +        +  +  A
Sbjct: 210 MPAALPGYVAGLKQGWAFSWRSLMAAEIIAKAPDIG--SGLGQMLEAGRTNSSMPQVFLA 267

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +  +L V    D LLF P+  W  + R
Sbjct: 268 IFLILIVGIAIDLLLFSPLERWVLRSR 294


>gi|256061630|ref|ZP_05451769.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella neotomae 5K33]
 gi|261325637|ref|ZP_05964834.1| glycine betaine/L-proline ABC transporter permease [Brucella
           neotomae 5K33]
 gi|261301617|gb|EEY05114.1| glycine betaine/L-proline ABC transporter permease [Brucella
           neotomae 5K33]
          Length = 278

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +      +  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           P++MP    GL   +M+S+S     VV + ++  G   +P+
Sbjct: 206 PYAMPQILAGLTQTIMLSLS----MVVIAALVGAGGLGVPV 242


>gi|253689683|ref|YP_003018873.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251756261|gb|ACT14337.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 422

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 238 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 292

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P +MP    G+   +M+++S     
Sbjct: 293 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 345

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 346 VVIASMIAVG-------GLGQMVLRGIGRLDM 370


>gi|238794435|ref|ZP_04638045.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia intermedia ATCC 29909]
 gi|238726230|gb|EEQ17774.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia intermedia ATCC 29909]
          Length = 347

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 162 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 216

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 217 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 269

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 270 VVIASMIAVG-------GLGQMVLRGIGRLDM 294


>gi|221212109|ref|ZP_03585087.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221168194|gb|EEE00663.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 292

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/142 (19%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + +L  FV  ++A  +R    +L  +  +   +P +  L   +++F  L  G +
Sbjct: 99  LLRGYALGVLLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGSL 157

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  +MY     +P  L    R++ L+G ++   + VP ++P 
Sbjct: 158 L-------FVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPS 210

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 211 ILSGLRVGWAFAWRTLIAAELV 232


>gi|118469502|ref|YP_884960.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118170789|gb|ABK71685.1| ABC transporter, permease protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 242

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 11/126 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L+A  RRL     P +  ++++P L ++   +++F      KV    + A F I+T+   
Sbjct: 77  LSATVRRL---FAPTVAALRTVPSLAWVPLLLLWFGIGETPKVTLVAIGAFFPIYTTTA- 132

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                   +L ++   L EV R++   G      + +P + P LV  + + ++  W F+V
Sbjct: 133 -------SALSHVDAQLLEVGRAYGRRGAALVTTVMLPAAAPALVNGLRLGLANAWLFLV 185

Query: 209 ASEMIV 214
           A+E+I 
Sbjct: 186 AAELIA 191


>gi|77459382|ref|YP_348889.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77383385|gb|ABA74898.1| putative transport system permease [Pseudomonas fluorescens Pf0-1]
          Length = 274

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L Q+ S +  R+ +  + +L+          +S+    +L+P L++++ IP + ++
Sbjct: 69  DSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWI 128

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F +        +EL+ +F  FT  ++ +  +    +  +   L   ++S     
Sbjct: 129 PLAILMFPS--------SELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGR 180

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P + P ++  + + M   WF +V +EMI  G       GIG Y   +   Q
Sbjct: 181 RAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMI-SGQF-----GIGYYTWESYTIQ 234

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +   I+  ML ++GV+ +   LL +
Sbjct: 235 NYADIVVGML-LIGVLGMGSSLLIK 258



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    + A +I I +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 80  SLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLAIL------ 133

Query: 446 LNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPG 501
           + P+  LS++ I   G  + IL N + G      D + +AS+  +   R      +ILPG
Sbjct: 134 MFPSSELSMVFITFTGALFPILLNTVHGVEGV--DPRLIASAKSLGAGRRAILLEVILPG 191

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +TG     G +W   + +E+ S         G+G Y  ES    ++ ++V+G+L+
Sbjct: 192 AAPSIITGLAIGMGTSWFCLVTAEMIS------GQFGIGYYTWESYTIQNYADIVVGMLL 245

Query: 562 M 562
           +
Sbjct: 246 I 246


>gi|24379499|ref|NP_721454.1| putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans UA159]
 gi|290580500|ref|YP_003484892.1| putative proline/glycine betaine ABC transporter permease
           [Streptococcus mutans NN2025]
 gi|24377438|gb|AAN58760.1|AE014944_10 putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans UA159]
 gi|254997399|dbj|BAH88000.1| putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans NN2025]
          Length = 576

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 120 AKNNTVKQIINPILDFMQTMPAFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRFTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +      ++  IP +L E + +F  +  QK + + +P +    M G+   +M+++S    
Sbjct: 177 L------AIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V G ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVTG-SMIGAPGLGRGVLSALQHADI 252


>gi|330980660|gb|EGH78763.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|295399916|ref|ZP_06809897.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111562|ref|YP_003989878.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|294978319|gb|EFG53916.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216663|gb|ADP75267.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 28/185 (15%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQ 461
           G+   I   + P  Q L   P+  + PL +           LW+ +       L+  G  
Sbjct: 88  GYFRTIRYLLDPLIQALRNIPSLAWVPLFI-----------LWMGIGEASKISLIALGVF 136

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N+++G         EV       GWR  R+  LP   P ++ G  +  G  W   
Sbjct: 137 FPVYLNLVSGIQGVDRRLLEVGWVHGYQGWRLIRHFFLPAALPSFIVGLRSGFGLGWMFV 196

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           + +E+         + GLG  + +    G  P +++  +++      L  +L   L L G
Sbjct: 197 VAAEIMG------ASKGLGFLLTDGQTTGR-PAIIIASILLFALFGKLTDYL---LELVG 246

Query: 582 TRCLR 586
            R LR
Sbjct: 247 RRILR 251


>gi|238750477|ref|ZP_04611978.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia rohdei ATCC 43380]
 gi|238711408|gb|EEQ03625.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia rohdei ATCC 43380]
          Length = 367

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|87311267|ref|ZP_01093389.1| nitrate transport permease protein [Blastopirellula marina DSM
           3645]
 gi|87286007|gb|EAQ77919.1| nitrate transport permease protein [Blastopirellula marina DSM
           3645]
          Length = 519

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V V  + A+ I IP+G+  G    I + + P   L       V+ P+V   V  +   P+
Sbjct: 315 VFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIVWLPIVFIVVGGFIERPD 374

Query: 450 --------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L  ++ +   + W  L N   G ++   D   VA    ++ W     I++P 
Sbjct: 375 EAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPS 434

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             P   TG   + G  W   I +E+ S       + GLG ++
Sbjct: 435 ALPLIFTGLRISLGVGWMVLIAAELLS------SSPGLGKFV 470



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L++   +    +W    +    + +I +D   V+R  RLS W +   + +P ++P +   
Sbjct: 383 LSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPSALPLIFTG 442

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           + +S+  GW  ++A+E++         PG+G ++
Sbjct: 443 LRISLGVGWMVLIAAELLSSS------PGLGKFV 470


>gi|330954780|gb|EGH55040.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 265

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|331699700|ref|YP_004335939.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954389|gb|AEA28086.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 325

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR     + P++++ + IP +  +   ++ F          +E   +F  F +  + + 
Sbjct: 156 RSRVARAAIRPVIEVSRPIPAIALVPLAILLFPT--------SEQGIVFITFFAAFFPVA 207

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            S   ++ ++P+  EE +R+          ++ +P +MPG+   + +SM   W  V+++E
Sbjct: 208 VSTIHAMKSLPKVWEEAARTMGARRVAVLTHIVLPGAMPGIFSGLSVSMGVAWICVISAE 267

Query: 212 MI 213
           MI
Sbjct: 268 MI 269


>gi|160891878|ref|ZP_02072881.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492]
 gi|156858356|gb|EDO51787.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492]
          Length = 394

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIF 140
           +Y +  A SR   + L PI++++  IP  + GF    V+  +   ++   V  + LA   
Sbjct: 198 IYMSEVANSRVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSI 256

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +      ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +
Sbjct: 257 VLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGI 316

Query: 201 SGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                  +A  M+     VI      PL  I + IA  + E       Y  L +LGV+  
Sbjct: 317 GRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLF 376

Query: 255 YDQLL 259
           +  LL
Sbjct: 377 FISLL 381


>gi|161520035|ref|YP_001583462.1| choline ABC transporter, permease protein [Burkholderia multivorans
           ATCC 17616]
 gi|189353784|ref|YP_001949411.1| glycine betaine/proline transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344085|gb|ABX17170.1| choline ABC transporter, permease protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337806|dbj|BAG46875.1| glycine betaine/proline transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 298

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL         AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLALGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P  
Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|320546803|ref|ZP_08041111.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus equinus ATCC 9812]
 gi|320448549|gb|EFW89284.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus equinus ATCC 9812]
          Length = 316

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +L P ++++  IP  + GF+   V+  F  L  G      L+ +  +F   +  +TF   
Sbjct: 129 ILQPAIELLTGIPSVVYGFIGLQVIVPFTRLIFGGTGFGILSGVCVLFVMILPTVTFMTI 188

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V 
Sbjct: 189 DSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVVG 248

Query: 216 GDTVIP 221
              V+P
Sbjct: 249 NSAVVP 254


>gi|242238740|ref|YP_002986921.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242130797|gb|ACS85099.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 288

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 18/80 (22%), Positives = 41/80 (51%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF +  S +W M  + Y     +P  L    R++ L+GW+    + +P ++P ++
Sbjct: 149 GEKSLIFVLVHSVMWPMALNAYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAII 208

Query: 194 WNMMMSMSGGWFFVVASEMI 213
             + +  +  W  ++A+E++
Sbjct: 209 SGLKIGWAFAWRTLIAAELV 228



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++    W +  N  +G    P   +    ++ +TGWR+   I++P   P  ++G     
Sbjct: 156 VLVHSVMWPMALNAYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAIISGLKIGW 215

Query: 515 GGAWNASIVSEV---ASWGHIHLRTTGLGAYIAESTEK--------GSFPEVVLGVLIMC 563
             AW   I +E+   AS G       GLG YI ++  +        G    +++G+L+  
Sbjct: 216 AFAWRTLIAAELVFGASSGK-----GGLGWYIFQNRNELYTDRVFAGLASVILIGLLVEG 270

Query: 564 CFVLALNRF 572
            F   L R 
Sbjct: 271 LFFSTLERL 279


>gi|227872518|ref|ZP_03990856.1| ABC superfamily ATP binding cassette transporter permease
           [Oribacterium sinus F0268]
 gi|227841637|gb|EEJ51929.1| ABC superfamily ATP binding cassette transporter permease
           [Oribacterium sinus F0268]
          Length = 246

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N++ G     +   E+A  FH + +R  RYI LP ++P  +  A  A G +W + I +E+
Sbjct: 132 NLLEGFHKTDHKLLEMAEVFHFSLYRRLRYIHLPAVYPLLLGAAKLAMGLSWKSGIAAEL 191


>gi|325927457|ref|ZP_08188701.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas perforans 91-118]
 gi|325542158|gb|EGD13656.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas perforans 91-118]
          Length = 406

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG V++ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +  L +IPR+L + + +  L  W + W + +P
Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELP 406


>gi|163737565|ref|ZP_02144982.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389091|gb|EDQ13443.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 81/165 (49%), Gaps = 22/165 (13%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS+LF        +KS RL   +VP+LD++Q++P   +L   +++  ++   K+ G  + 
Sbjct: 161 ISVLFGVPIGIAMSKSDRLQKSVVPLLDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAII 219

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLV 193
               +   ++ ++   +      + +D+ E + +F ++  QK   + +P ++P    G+ 
Sbjct: 220 LYAIVPVIRLTDLGIRL------VDQDVIEAANAFGMNDRQKLMRVQLPLALPNIMAGIN 273

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +MMS++          M+V+  +++  PG+G  +   I+  +L
Sbjct: 274 QTIMMSLA----------MVVIA-SLVSAPGLGVNVLRGIRNLEL 307


>gi|115373306|ref|ZP_01460606.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369752|gb|EAU68687.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Stigmatella aurantiaca
           DW4/3-1]
          Length = 482

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKVIG 133
           ++V S+L       LAA+  RLG +++ +  I+Q++P L  L F + +  +   P     
Sbjct: 287 SLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTRP----- 341

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+F   +  +  +    L  I  DL E + +  L    + W + +P + P L+
Sbjct: 342 ----AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSLL 397

Query: 194 WNMMMS 199
             +  +
Sbjct: 398 AGIQTA 403


>gi|70733048|ref|YP_262821.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68347347|gb|AAY94953.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 287

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ +L       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 95  QETMETLAQVLFATLVCVLIGVPLGIVAAHKPLFYTMMRPVLDLMQTVPTFVYLIPTLTL 154

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 155 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 205

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 206 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 254

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 255 IALGFEAGLAIVLLAIMLDRICKQP 279


>gi|325264227|ref|ZP_08130959.1| taurine ABC transporter, permease protein [Clostridium sp. D5]
 gi|324030711|gb|EGB91994.1| taurine ABC transporter, permease protein [Clostridium sp. D5]
          Length = 263

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   +++ L       L  + R +  +  P  ++++ IP + +++  +++F       
Sbjct: 74  RVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILWFG------ 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E    F IF +    +T ++Y+    + ++L   ++    +  Q FW + +P ++P
Sbjct: 128 -IG-ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLPATVP 185

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   M + +S  W  VVA+EM+
Sbjct: 186 YIFAGMQIGLSTSWAAVVAAEMV 208


>gi|260425684|ref|ZP_05779664.1| taurine ABC transporter, permease protein [Citreicella sp. SE45]
 gi|260423624|gb|EEX16874.1| taurine ABC transporter, permease protein [Citreicella sp. SE45]
          Length = 421

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+      ++I IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +L+     W +     +G S         A S   + W+  R++I+P   P 
Sbjct: 290 LGK----IILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQIMRHVIVPNSLPD 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++         IG EL  I  +F + +W M  +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIW-------AGIG-ELGKIILLFLAALWIMAIAARSGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++        
Sbjct: 316 SISKVHAAYSLGASKWQIMRHVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAAEK---- 371

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G G  I +A K Q L  I+   + ++GVI     +L R
Sbjct: 372 --GAGMMIMVASKFQ-LTDIVIMGIILIGVIGFGIDILMR 408


>gi|296128155|ref|YP_003635405.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296019970|gb|ADG73206.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 286

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 22/178 (12%)

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV----------WNMTFSMYQSLC 159
           +P L   T T V F+   P   I   LA + A  + +           W +   +   + 
Sbjct: 114 VPFLRRATHTTVEFLRPIPSVAI-IPLAVLLAGLSREAALVIVVYAPFWQVFVQVLYGVG 172

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++    ++ +RSF L  WQ+  ++ +P ++P ++    ++ S      + +E+ V+G+  
Sbjct: 173 DVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLAASIALVLTITAEL-VIGN-- 229

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNKFRLE 273
              PGIG  I +     D    LYA++ + G    ++ L  +L+ R ++ W    R E
Sbjct: 230 ---PGIGRQIDVYRSNADAPG-LYALVLVTGGLGLLVNLATRLVERRVLHWHPSVRKE 283



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 15/132 (11%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++++   W +   V+ G         + A SF +  W+  R+++LP   PY +TG   A
Sbjct: 153 VIVVYAPFWQVFVQVLYGVGDVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLA 212

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLG----AYIAESTEKGSFPEVV----LGVLIMCCF 565
              A   +I +E+       +   G+G     Y + +   G +  V+    LG+L+    
Sbjct: 213 ASIALVLTITAELV------IGNPGIGRQIDVYRSNADAPGLYALVLVTGGLGLLVNLAT 266

Query: 566 VLALNRFL-WHP 576
            L   R L WHP
Sbjct: 267 RLVERRVLHWHP 278


>gi|163852761|ref|YP_001640804.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664366|gb|ABY31733.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 291

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP +   +  R+LS  + +L           +SR    +L+P L++++ IP + ++   
Sbjct: 89  ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F +        +E++  F  FT  ++ +  +    + ++   L   +RS        
Sbjct: 149 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              + +P + P +V    + M   WF +V +EMI
Sbjct: 201 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 234



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A  + + +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 97  SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 156

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++    ++ +   G  + IL N + G  +        A S         R +ILPG  P 
Sbjct: 157 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++
Sbjct: 213 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 263


>gi|114567251|ref|YP_754405.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338186|gb|ABI69034.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++ISLL         A S R   ++ PILD MQ++P   +L   ++ F     GKV G 
Sbjct: 102 SVIISLLLGIPLGIAMAVSDRCNTMVTPILDAMQTMPSFVYLIPALMLF---GLGKVPGV 158

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               I+A+    V  +T      +  +P  ++E + +F  + WQ    + +P +MP ++ 
Sbjct: 159 VATVIYAL--PPVVRLT---NLGIRQVPSSVQEAALAFGATSWQLMKEVRIPLAMPSILA 213

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  +       VV + MI  G       G+G  + +     D+
Sbjct: 214 GINQTTMMALAMVVIASMIGAG-------GMGEVVLICTNRIDV 250


>gi|307729503|ref|YP_003906727.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307584038|gb|ADN57436.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 288

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 33/175 (18%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475
           Q++   PA    PLV+           LW  +       L+  G  + +  N   G  + 
Sbjct: 128 QMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPLYVNTFHGIRSV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G   +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 177 DPNLIEMARSYGVKGLALYRHVILPGALPSILVGVRFALGLMWVTLIVAETIS------A 230

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYG 581
            +G+G     + E      VV+G+L+         VLA  L R    WHP Y  G
Sbjct: 231 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERVSLRWHPAYQRG 285


>gi|255066447|ref|ZP_05318302.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sicca ATCC
           29256]
 gi|255049327|gb|EET44791.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sicca ATCC
           29256]
          Length = 509

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + TL  L   +I+LL     A  LA   A  RR    ++ I +I+Q+IP L  L   + +
Sbjct: 14  QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQITNILQTIPSLALLGLLIPF 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P  +I   L A+  IF +         Y  L  I   ++E   +F LS WQ  W 
Sbjct: 74  VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125

Query: 183 LGVPFSMPGLV 193
           + +P ++P ++
Sbjct: 126 IELPMALPAMI 136


>gi|222081719|ref|YP_002541084.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726398|gb|ACM29487.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++IS++  F    LA+++R +  ++ PILDIMQ++P   +L   V+ F     G+V   
Sbjct: 101 AVLISVVIAFPLGILASRNRSIEALIRPILDIMQTVPPWVYLIPAVMIFSL---GRV--- 154

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AI A     V  M      +   +P DL+E+ ++   S       + +P + P LV
Sbjct: 155 --PAIIATIVYGVPPMLRLTTLAFRQVPNDLKELGQAIGASPTSILLKIEIPSAKPTLV 211


>gi|171779497|ref|ZP_02920461.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282114|gb|EDT47545.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 305

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFTRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 177 IDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236

Query: 215 VGDTVIP 221
               V+P
Sbjct: 237 GNSAVVP 243


>gi|110634883|ref|YP_675091.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285867|gb|ABG63926.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +IS L       L AK R +  +L+P+LDIMQ++P   +L   ++ F   
Sbjct: 113 QTLALMLMATLISCLVGIPTGVLVAKVRVMRNILIPMLDIMQTMPSFVYLIPAIMLF--- 169

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      A+ A     V  +       +  + +++ E + +F  S  Q  + + +P
Sbjct: 170 GLGKV-----PAVLATIIYGVPPLIRLTSLGIRQVDQEVVEAALAFGSSSRQILFGVELP 224

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    GL   +MMS+S     VV S MI
Sbjct: 225 LAVPTILAGLNQTIMMSLS----MVVVSSMI 251


>gi|86145795|ref|ZP_01064124.1| ABC transporter permease protein [Vibrio sp. MED222]
 gi|85836494|gb|EAQ54623.1| ABC transporter permease protein [Vibrio sp. MED222]
          Length = 271

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   Y+ +P ++P L   + +++      V+A    VVG+
Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W N+
Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271


>gi|218130137|ref|ZP_03458941.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697]
 gi|317476630|ref|ZP_07935875.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|217987641|gb|EEC53969.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697]
 gi|316907226|gb|EFV28935.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 395

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 12/197 (6%)

Query: 75  AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128
           A++I+L F    A   ++  + ++  ++ PI++++  IP  + GF    V+  +   ++ 
Sbjct: 185 AILIALPFGLAVAVYMSEVANHKIRNLMKPIIELLSGIPSVVYGFFGLIVIVPFLQKVFD 244

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V  + LA    +    +  +      ++ N PR + E S +   S WQ  + + +P+S
Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYS 304

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242
           + G+   +++ +       +A  M+     VI      PL  I + IA  + E       
Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGAH 364

Query: 243 YAMLTMLGVIFLYDQLL 259
           Y  L +LGV+  +  LL
Sbjct: 365 YEALFLLGVVLFFISLL 381


>gi|157738204|ref|YP_001490888.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157700058|gb|ABV68218.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 260

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I    + G      D K++A SFH+        + LP IF Y     I+A G +W   ++
Sbjct: 144 IFVGALQGTRTIEGDLKQMADSFHLPFKMKIFDLYLPHIFSYIFPAYISALGMSWKIVVM 203

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +E+ S       + G+GA +A +  +   P  +  V+IM   +L +   ++ P+
Sbjct: 204 AELLS------SSNGIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEPI 251


>gi|254252483|ref|ZP_04945801.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124895092|gb|EAY68972.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 270

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G   
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGANA 270


>gi|167041923|gb|ABZ06662.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_133I24]
          Length = 295

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L +KS R    ++P+LD+MQ+IP   +L   V   M L  GKV G     I+A     
Sbjct: 122 GVLMSKSDRAEKTILPVLDMMQTIPSFVYL---VPILMLLGIGKVPGLIAVCIYA--APP 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +T      +  + ++  E   +F  + WQ+   + +P ++P    G+   +MM+++ 
Sbjct: 177 IIRLT---NLGIREVDKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALA- 232

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    M+V+  ++I + G+G  I  AI  Q L   L   L ++ +  ++D++
Sbjct: 233 ---------MVVIA-SMIGVKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRV 278


>gi|163737851|ref|ZP_02145268.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389377|gb|EDQ13729.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 318

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 84/165 (50%), Gaps = 22/165 (13%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S+LF      + ++S R+  +++PILD++Q++P   +L   +++  ++   K+ G  + 
Sbjct: 137 LSVLFGVPVGIMMSRSDRMQKIMLPILDMLQTLPSFVYL-IPLIFLFSVTEPKLYGIAII 195

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLV 193
               +   ++ ++   +      + +D+ E + +F ++  QK + + +P ++P    G+ 
Sbjct: 196 LYAIVPVIRLTDLGIRL------VDKDVVEAADAFGMTDRQKLYGVQLPLALPNIMAGVN 249

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +MMS++          M+V+  +++  PG+G  +   I+  +L
Sbjct: 250 QTIMMSLA----------MVVIA-SLVSAPGLGVLVLRGIRNLEL 283


>gi|50123330|ref|YP_052497.1| putative aliphatic sulfonates transport permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613856|emb|CAG77308.1| putative aliphatic sulfonates transport permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 264

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +P ++P ++ 
Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248
            +  ++   W        ++V +T+    GIG Y+A+  +E    D++    ILYA+L  
Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236

Query: 249 L 249
           L
Sbjct: 237 L 237


>gi|315635363|ref|ZP_07890630.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Arcobacter butzleri JV22]
 gi|315480348|gb|EFU71014.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Arcobacter butzleri JV22]
          Length = 261

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I     F+   +   S+    +L   + ++++IP+L  +   +++F       
Sbjct: 71  RALLGLIIGGSIGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFG------ 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E + IF +  +  + +  + +  L ++ +DL E+ + + L+ ++ F  + +P +MP
Sbjct: 125 -IG-EFSKIFLLALAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMP 182

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++  + MS+   W +++ +E      T+    GIG Y+ +  +E
Sbjct: 183 SILVGLRMSLGFMWLYLIVAE------TIASSEGIG-YMTMNARE 220



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 31/233 (13%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           ++ G+   + G +++HF             +++ R ++ +II   I   +G   G     
Sbjct: 49  ISAGVTLTANGELIHHF------------LVSLQRALLGLIIGGSIGFILGFITGLSKLA 96

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + +    Q++   P     PLV+        +    L+L + F     I  N   G  +
Sbjct: 97  ENLLDSTIQMIRTIPLLALVPLVILWFGIGEFSKIFLLALAVFFP----IYLNTFHGLRS 152

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D  E+   + +  +  ++ IILPG  P  + G   + G  W   IV+E  +      
Sbjct: 153 VDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLGFMWLYLIVAETIA------ 206

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---------VLALNRFLWHPLY 578
            + G+G     + E      +VLG+L+             VL      WH  Y
Sbjct: 207 SSEGIGYMTMNAREFLQTDIMVLGILLYAVLGKISDILASVLEKRYLKWHKGY 259


>gi|302868051|ref|YP_003836688.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|302570910|gb|ADL47112.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
          Length = 278

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  + I FN  AG         E A +  +      R+++LPG  P    G   A 
Sbjct: 149 LVALGAFFPIYFNTYAGIRDIDERLVEAARTCGLGAVARLRHVVLPGALPALFLGLRLAI 208

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW + +V E  +        TG+G  + E+ E      VVLG+LI     LA +
Sbjct: 209 GAAWLSLVVGEQVNA------QTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASD 258


>gi|261819400|ref|YP_003257506.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261603413|gb|ACX85899.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 264

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +P ++P ++ 
Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248
            +  ++   W        ++V +T+    GIG Y+A+  +E    D++    ILYA+L  
Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236

Query: 249 L 249
           L
Sbjct: 237 L 237


>gi|222153813|ref|YP_002562990.1| glycine-betaine binding permease [Streptococcus uberis 0140J]
 gi|222114626|emb|CAR43642.1| putative glycine-betaine binding permease protein [Streptococcus
           uberis 0140J]
          Length = 575

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 120 AKSSTVRHIINPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  I ++L E S +F  +  QK   + +P +    M G+   MM+++S    
Sbjct: 177 L------GIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V G ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVTG-SMIGAPGLGREVLSALQHADI 252


>gi|154149711|ref|YP_001403329.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Methanoregula boonei 6A8]
 gi|153998263|gb|ABS54686.1| binding-protein-dependent transport systems inner membrane
           component [Methanoregula boonei 6A8]
          Length = 310

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GT 460
           IP+G+++G++  +     P A+ ++  P   + P  +  +  +  +     S+ +IF G 
Sbjct: 136 IPIGLYLGWKKRLFDVAYPIAKAVSPIPPTAYLPYTIVLLPTFATS-----SIFLIFIGA 190

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W IL   + G  +        A +  ++     R ++ PG  P   +GA  A   ++  
Sbjct: 191 FWPILVGSVYGVFSIDRRLINSAKTLGLSERDILRKVLFPGALPSIFSGAFIALIMSFIT 250

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             V+E+ +       T+GLG YI  + +  ++ +V+ G
Sbjct: 251 LTVAEMIA------ATSGLGWYIQYNHDFANYDKVIAG 282


>gi|299530863|ref|ZP_07044277.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
 gi|298721084|gb|EFI62027.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
          Length = 290

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 12/170 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GT 460
           IP+G  IG  P     + PF Q+L         PL    ++ Y +  +    + +IF  +
Sbjct: 118 IPLGFLIGMSPLAYRALDPFIQVLKPIS-----PLAWMPIALYTIKDSSISGIFVIFICS 172

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W +L N   G +    ++  VA++  +   R    +ILP   P  +TG   + G AW  
Sbjct: 173 IWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVILPAAAPTILTGMRISMGIAWLV 232

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +E+   G      TG+G ++       S   V+  +L++    +AL+
Sbjct: 233 IVAAEMLVGG------TGIGYFVWNEWNNLSLANVIFAILVIGLVGMALD 276



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + ++ IF IF   +W M  +    +  + R+   V+ + ++   +K   + +P + P ++
Sbjct: 160 SSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVILPAAAPTIL 219

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +SM   W  +VA+EM+V G       GIG ++        L  +++A+L ++G++ 
Sbjct: 220 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLANVIFAIL-VIGLVG 272

Query: 254 LYDQLLF 260
           +   +LF
Sbjct: 273 MALDMLF 279


>gi|186471961|ref|YP_001863279.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184198270|gb|ACC76233.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 36/68 (52%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q + N P   +EV+R F  S WQ+  ++ +P ++P L   + ++ +  W  +V 
Sbjct: 165 VTLSTMQGVRNTPAPFDEVARVFGYSRWQRVIHIVLPAAVPTLATGVRLAFTKAWLALVV 224

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 225 VELVASSE 232



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  + + G    P  F EVA  F  + W+   +I+LP   P   TG   A   AW A +V
Sbjct: 165 VTLSTMQGVRNTPAPFDEVARVFGYSRWQRVIHIVLPAAVPTLATGVRLAFTKAWLALVV 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E+ +       + GLG  I    +      V+  V+I+     A+NR L
Sbjct: 225 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVIVGAIGFAINRLL 268


>gi|266619678|ref|ZP_06112613.1| sugar ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
 gi|288868776|gb|EFD01075.1| sugar ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
          Length = 295

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLS 175
           V Y + L    V+G+   A+  +  S VW     M   +   L  +P DL+E +     +
Sbjct: 140 VNYLLGLGDYSVLGSPKTAMLGVIISAVWKQMPLMMIMLLSGLQTVPEDLKEAAEIDGAT 199

Query: 176 GWQKFWYLGVPFSMP 190
           G QKFW + VP  MP
Sbjct: 200 GVQKFWCITVPCIMP 214


>gi|238796648|ref|ZP_04640154.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia mollaretii ATCC 43969]
 gi|238719379|gb|EEQ11189.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia mollaretii ATCC 43969]
          Length = 365

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 180 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 235 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 287

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 288 VVIASMIAVG-------GLGQMVLRGIGRLDM 312


>gi|289672263|ref|ZP_06493153.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330939256|gb|EGH42657.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 21/153 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLG 250
           GIG Y+A+  +E    D   L  +LYA+L  L 
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA 239



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|266622872|ref|ZP_06115807.1| taurine uptake ABC transporter, permease protein [Clostridium
           hathewayi DSM 13479]
 gi|288865367|gb|EFC97665.1| taurine uptake ABC transporter, permease protein [Clostridium
           hathewayi DSM 13479]
          Length = 261

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A IF IF +   N T +      N+  ++   +R       Q F  + +P S+P + 
Sbjct: 127 GEEAKIFLIFLAAFANTTLNAMTGAMNVDPEVVNAARMLGAKERQIFTTVIIPASVPAIF 186

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             + + +S  W  VVA+EMI   +      G+G  I   +   ++  IL A + M+GV+
Sbjct: 187 AGLQVGISSAWASVVAAEMIKAEN------GLGWIIQAGMDNNNMTQIL-AGIIMIGVV 238


>gi|261823527|ref|YP_003261633.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261607540|gb|ACX90026.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 536

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
           D VP  L +H LP    R  +     + + L    V  +L   +RRL  + +P+  ++  
Sbjct: 73  DFVPEEL-IHQLPISLMRLAIGFSGGIALGL----VLGSLFGLNRRLNALFMPLFTVIAQ 127

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L ++   ++          IG  L  +  + +  V  +T      +   P+ L E++
Sbjct: 128 IPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQKLHEMA 179

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           RS RL       YL +P  +P ++  + ++ S GW  ++A E++   +      G+G Y+
Sbjct: 180 RSLRLPPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLG-YL 232

Query: 230 ALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
            +  ++  +L +++  + ++G++ F  +++L +
Sbjct: 233 LVQSRQLFMLDLVFVCILIIGILGFSGERVLLK 265



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG    P    E+A S  +    + RY+ILP + PY +TG   A    W A I  E+ + 
Sbjct: 166 AGIQQTPQKLHEMARSLRLPPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 224

Query: 530 GHIHLRTTGLGAYIAESTE 548
                 + GLG  + +S +
Sbjct: 225 -----SSEGLGYLLVQSRQ 238


>gi|328956726|ref|YP_004374112.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
 gi|328673050|gb|AEB29096.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
          Length = 306

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           VL P+++++  IP  + GF+  TVV  +  +++ G   G  L+A F +F   +  +T   
Sbjct: 122 VLQPVVELLVGIPSVVYGFIGLTVVVPFVRSIFGGTGFGI-LSATFVLFVMILPTVTSMA 180

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +PR   E S +   + WQ  + + +  +MPGL+  ++  M+  +   +A +M++
Sbjct: 181 VDALNAVPRYYREASLAMGATRWQTIYKVVLRSAMPGLLTAVVFGMARAFGEALAVQMVI 240

Query: 215 VGDTVIP 221
               ++P
Sbjct: 241 GNAALMP 247


>gi|126734811|ref|ZP_01750557.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter sp. CCS2]
 gi|126715366|gb|EBA12231.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter sp. CCS2]
          Length = 512

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   RP   + IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 344 LIGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 400

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF    W     + LP   P    G
Sbjct: 401 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAG 450


>gi|254250444|ref|ZP_04943763.1| amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|124879578|gb|EAY66934.1| amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
          Length = 323

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  +IP L  L   +  F        IG  + AI A+F + +  +T + Y+ + N+P
Sbjct: 167 VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 218

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E ++   ++GWQ    + +P ++P +V  +  +++
Sbjct: 219 AALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALA 257


>gi|29831397|ref|NP_826031.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29608512|dbj|BAC72566.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 289

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+  +++ +       L A+SR    +L P L++++ IP +  +   ++ F +   G 
Sbjct: 64  RILTGFLLAAVLGVATGVLVARSRLAEDLLGPPLEVLRPIPAIALVPVAILLFPSNEQGI 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V     AA F +  S     T    ++L  +    EE  R+     W+    + +P ++P
Sbjct: 124 VFITCTAAYFPVLVS-----TRHAVRALTPV---WEEAVRTMGAGRWRVLGSVVLPGALP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
           G+   + + +   W  V+++EMI
Sbjct: 176 GIFGGLSVGIGVSWICVISAEMI 198


>gi|55821035|ref|YP_139477.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822954|ref|YP_141395.1| phosphate ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|116627794|ref|YP_820413.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|55737020|gb|AAV60662.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738939|gb|AAV62580.1| phosphate ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
 gi|116101071|gb|ABJ66217.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P ++++  IP  + GF+   VV  F+    G      L+  F +F   +  +TF    
Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V  
Sbjct: 178 ALRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGN 237

Query: 217 DTVIP 221
             VIP
Sbjct: 238 SAVIP 242


>gi|315636350|ref|ZP_07891600.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
 gi|315479439|gb|EFU70122.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
          Length = 260

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I    + G      D K++A SFH+        + LP IF Y     I+A G +W   ++
Sbjct: 144 IFVGALQGTRTIEGDLKQMADSFHLPFTMKIFDLYLPHIFSYIFPAYISALGMSWKIVVM 203

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +E+ S       + G+GA +A +  +   P  +  V+IM   +L +   ++ P+
Sbjct: 204 AELLS------SSNGIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEPI 251


>gi|90407797|ref|ZP_01215974.1| ABC transporter permease protein [Psychromonas sp. CNPT3]
 gi|90311062|gb|EAS39170.1| ABC transporter permease protein [Psychromonas sp. CNPT3]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 21/174 (12%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+ P+       +++       KV+ A L   F I T          Y  L 
Sbjct: 105 LMPILIASQAFPVFAIAPILMLWLGYGIASKVVMAALIIFFPICTC--------CYDGLR 156

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N P+   ++ ++   S WQ   Y+ +P S+P L   + +++      V+A    V G+ V
Sbjct: 157 NTPQGYLDLVKTMGASKWQVLRYIQLPASLPTLASGIRVAV------VIAPIGAVAGEWV 210

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTML-----GVIFLYDQLLFRPMIVWSN 268
               G+G Y+ L    + L+  ++A L +L     G+ FL D +L R +I W +
Sbjct: 211 GSSEGLG-YLMLQANARMLIDEMFAALFILSALSVGLYFLTD-ILLRKLIHWQD 262


>gi|86748882|ref|YP_485378.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
 gi|86571910|gb|ABD06467.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
          Length = 299

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L PI  ++++IP L +L   +  F +  P        +AIF IF + +W +  +    + 
Sbjct: 140 LDPIFQVLRTIPPLAWLPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           NIP+D   V+   +L+  + F  + +P + P +   + + +   W  ++A+EM++ G   
Sbjct: 192 NIPQDYRNVAAVVQLNPLEFFTKVMLPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV-- 249

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  A     +  I+ A+  +  + F+ D+++
Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRMI 285



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I+ N   G    P D++ VA+   +    ++  ++LP   PY  TG     G +W A 
Sbjct: 180 WPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVMLPSAAPYIFTGLRIGIGLSWLAI 239

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +E+   G       G+G +I ++       E++L +  +      L+R +
Sbjct: 240 IAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRMI 285


>gi|320332813|ref|YP_004169524.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319754102|gb|ADV65859.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 296

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           F+   L   SR   ++L     ++++IP L  +   +V+F     GKV    LA  F ++
Sbjct: 121 FLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGKVFLIALATYFPVY 180

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + V          +  I   L+E++R + LS  + F  + +P ++PG++  +  ++   
Sbjct: 181 LNTV--------HGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALGIS 232

Query: 204 WFFVVASE 211
           W  +V SE
Sbjct: 233 WLALVVSE 240


>gi|297163358|gb|ADI13070.1| hypothetical protein SBI_09952 [Streptomyces bingchenggensis BCW-1]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 30/50 (60%)

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           MY +L NIP+D+ E +R      WQ  W++ +P     +V+ M+++ +GG
Sbjct: 186 MYGALNNIPKDVMEAARIDGAGAWQTAWHVQIPMLRKWIVYMMILAFAGG 235


>gi|269966457|ref|ZP_06180541.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 40B]
 gi|269828914|gb|EEZ83164.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 40B]
          Length = 361

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL + L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F   
Sbjct: 141 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 197

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G  +  IFA+    V  +T    Q    +P +L E   SF  +  Q  + + +P
Sbjct: 198 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 252

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            ++P    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 253 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|47717445|gb|AAT37720.1| glycine betaine/L-proline transport system permease [Yersinia
           enterocolitica]
          Length = 290

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 121 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 175

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 176 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 228

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 229 VVIASMIAVG-------GLGQMVLRGIGRLDM 253


>gi|299069872|emb|CBJ41154.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum CMR15]
          Length = 298

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%)

Query: 414 ISSKI-QPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           I S++ Q F + L A     PA    P+    + ++ L  N  L  +++    W +  N 
Sbjct: 124 IGSRLGQDFLETLTAMFNPLPAIALLPI---ALVWFGLG-NGSLVFVIVHSVVWAVSLNT 179

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+  
Sbjct: 180 HAGFLSVSNTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWAFAWRTLIASELVF 239

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              +     GLG YI E+      PEV  G+L +    L +   ++  L
Sbjct: 240 --GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 17/173 (9%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG   +  L  M   +P +  L   +V+F  L  G ++       F I  S VW ++ +
Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVSLN 178

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE++
Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWAFAWRTLIASELV 238

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263
                     G+G YI    + ++LL I      +LT++ +  L + L+FR +
Sbjct: 239 F--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|213026789|ref|ZP_03341236.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 349

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 249 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 303

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           T      +  +P DL E SRSF  S  Q  + + +P +MP
Sbjct: 304 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMP 340


>gi|254439788|ref|ZP_05053282.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198255234|gb|EDY79548.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 289

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ +++L     A L  +SR + M   PI  I+Q  PI+       +Y  +   G ++
Sbjct: 93  LMALAVAVLGGVGLAVLFTQSRWMEMSFYPIAVILQVTPIVAIAPLIFIYVDSRMAGLLL 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L A F + +    N T      L +    L ++ R +  + WQK  +L +P ++P  
Sbjct: 153 CAWLVAFFPVLS----NTTL----GLNSADHGLRDLFRIYGATRWQKLRFLQLPSALPYF 204

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +    + ++GG   + A    VV + V    GIGS +A  I E
Sbjct: 205 LGG--LRIAGGLSLIGA----VVAEYVAGTGGIGSGLAFRILE 241


>gi|118467860|ref|YP_886840.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169147|gb|ABK70043.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner
           membrane subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 288

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 24/197 (12%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VVV  ++AS + + V   +     + S ++P+  +  A P    +P++V           
Sbjct: 103 VVVSFVVASGLGVAVAYLMWRSAVVRSALEPYLSVFYAVPTFAVYPILV-----VLFGVG 157

Query: 450 LWLSLLMIFGTQWYI---LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +W   +++  + + I   + N +AG  + P    ++  S  +T W+ +R I+LP   P  
Sbjct: 158 VWP--IVVLASTFSIVVVILNSLAGFDSVPEVVSKLDRSLKLTRWQSFRLILLPSAMPDI 215

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G +  C      S+++ +A      L + GLG +IA++ +  +  E+   +LI+    
Sbjct: 216 AAG-VKLC---MAYSVIATLAM--EFILASDGLGNFIADAYDSFAVAEMYGAILIVGALA 269

Query: 567 L--------ALNRFLWH 575
           L        ALNR  W 
Sbjct: 270 LIANLGISAALNRLDWR 286



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 17/160 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L P L +  ++P        VV F + ++P  V+ +  + +  I  S             
Sbjct: 131 LEPYLSVFYAVPTFAVYPILVVLFGVGVWPIVVLASTFSIVVVILNS---------LAGF 181

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++P  + ++ RS +L+ WQ F  + +P +MP +   + + M+      +A E I+  D 
Sbjct: 182 DSVPEVVSKLDRSLKLTRWQSFRLILLPSAMPDIAAGVKLCMAYSVIATLAMEFILASD- 240

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                G+G++IA A  +   +A +Y  + ++G + L   L
Sbjct: 241 -----GLGNFIADA-YDSFAVAEMYGAILIVGALALIANL 274


>gi|226309354|ref|YP_002769314.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188471|dbj|BAH36575.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 263

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+  I    VW +       + N+  +L   +RSFRL  W++   +  P SMP +   + 
Sbjct: 131 AVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPYIFTGIR 190

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD------LLAILYAMLTMLGV 251
           +S +      + +E+I        +PG+G  I L+    D      ++A L  ML    V
Sbjct: 191 ISATLSLLLTIGAELIA------GVPGLGKEILLSQSVPDRMFALIIVAGLLGMLLAFAV 244

Query: 252 IFLYDQLL 259
           + + ++LL
Sbjct: 245 MAIENRLL 252


>gi|110679135|ref|YP_682142.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter denitrificans OCh 114]
 gi|109455251|gb|ABG31456.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter denitrificans OCh 114]
          Length = 513

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   RP   + IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 345 LIGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF    W     + LP   P    G
Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAG 451


>gi|254228316|ref|ZP_04921743.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262394381|ref|YP_003286235.1| L-proline glycine betaine ABC transport system permease proW
           [Vibrio sp. Ex25]
 gi|151939122|gb|EDN57953.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262337975|gb|ACY51770.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
          Length = 363

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL + L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F   
Sbjct: 143 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 199

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G  +  IFA+    V  +T    Q    +P +L E   SF  +  Q  + + +P
Sbjct: 200 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 254

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            ++P    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 255 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 299


>gi|329928157|ref|ZP_08282103.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328938034|gb|EGG34433.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 258

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV++     S++ IPVGI IG    I +  +PF   +   P   F  L +      
Sbjct: 59  ISSYRVLLGWTFGSLLAIPVGIMIGKVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+++ T + ++ N + G  +   D    A S   + W+   ++++P   P
Sbjct: 119 ETSK----IMLILYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           +  TG   A G ++ A I +E+
Sbjct: 175 FMFTGIRLAMGTSFMAIIGAEM 196


>gi|311896718|dbj|BAJ29126.1| putative ABC transporter permease protein [Kitasatospora setae
           KM-6054]
          Length = 261

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/167 (19%), Positives = 74/167 (44%), Gaps = 8/167 (4%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           +++D +   L      Q  + +  R+ +   ++ L       L A+SR    ++ P+L++
Sbjct: 42  EVLDALRAQLGTAVYWQDLADSLRRISTGFALAALLGVGTGVLTARSRLAADLVGPVLEL 101

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP +  +   ++ F     G V     AA F +        T +   ++  +P   E
Sbjct: 102 VRPIPAIALVPVAIMLFPENEQGIVFITCAAAFFPV--------TVATRHAVRAVPPRWE 153

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           E  R+      +  + + +P ++PG+V  + + +   W  V+++EM+
Sbjct: 154 EAVRTMGGGTGRVLFGVVLPGALPGVVGGLSVGLGVSWICVISAEMV 200


>gi|170750957|ref|YP_001757217.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170657479|gb|ACB26534.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 286

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 19/178 (10%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P I + + P  Q+L   P   + PL    +  + L P      L+  G  + IL N
Sbjct: 116 IGRVPLIRALLDPALQVLRPVPVTAWLPL---AMILFGLGPRSAF-FLVFLGAFYPILVN 171

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  +      E A+    TG   +  ++LP   P   TG     G AW   +V E+ 
Sbjct: 172 TVFGVRSVEPRLFEAAAMLGCTGPAQFVRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 231

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNRFL--WHP 576
                    TGLGA I E+ +      V+ G+ ++          V+ L+R L  W P
Sbjct: 232 GV------QTGLGAIIMEARQLSRTEIVICGMAVIGVAGFVSDWLVMQLSRRLLAWSP 283


>gi|66048099|ref|YP_237940.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63258806|gb|AAY39902.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330970748|gb|EGH70814.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 21/153 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + NI  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLG 250
           GIG Y+A+  +E    D   L  +LYA+L  L 
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA 239



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVCLRWHPAY 257


>gi|220908632|ref|YP_002483943.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
 gi|219865243|gb|ACL45582.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
          Length = 294

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 14/187 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +++++ IP+G+ +G    I + ++P   L+   PA  F PL++  +    
Sbjct: 102 SLGRVGVGFFLSALVSIPIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILYLGIGE 161

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIF 503
             P +    L+  GT ++    V+      P D  E  +++ + G R      +ILP + 
Sbjct: 162 -PPKI---ALIFMGTFFFNTLMVMDAVKFVPRDLIE--ATYMLGGNRREVLTQVILPHVL 215

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +  +      AW   IVSE+ +       T GLG  I+ +       E+ +G++++ 
Sbjct: 216 PGILDASRINLAAAWQLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLIVIG 269

Query: 564 CFVLALN 570
              L+ +
Sbjct: 270 IIGLSFD 276


>gi|163801350|ref|ZP_02195249.1| putative permease [Vibrio sp. AND4]
 gi|159174839|gb|EDP59639.1| putative permease [Vibrio sp. AND4]
          Length = 299

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 29/200 (14%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  +   V         A+S R+  V+ P+LD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTMLAIVLGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + +F  S  Q+  
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLV 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q 
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQY 260

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
               L   L ++ +  L+D+
Sbjct: 261 FTLGLLNGLAIVALAILFDR 280


>gi|330967519|gb|EGH67779.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +  A++  IPVGI IG          P  +     P   + PL+V       
Sbjct: 93  SLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPLIVIWFGIGE 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  L L  L IF     I      G           A S   T W+  R++I+P   P 
Sbjct: 153 FSKVL-LIYLAIFAP---IAIATATGVRTVDPTRVRAAQSLGATRWQLIRHVIVPSALPD 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 209 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAII 262

Query: 566 VLALN 570
             A+ 
Sbjct: 263 AFAME 267


>gi|330812274|ref|YP_004356736.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380382|gb|AEA71732.1| putative glycine betaine/L-proline ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 281

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ +L       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVLIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P +L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPDELMDAGKAFGCSRRQLLS 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|229494700|ref|ZP_04388458.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
 gi|229318367|gb|EEN84230.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
          Length = 260

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+  I    VW +       + N+  +L   +RSFRL  W++   +  P SMP +   + 
Sbjct: 128 AVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPYIFTGIR 187

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD------LLAILYAMLTMLGV 251
           +S +      + +E+I        +PG+G  I L+    D      ++A L  ML    V
Sbjct: 188 ISATLSLLLTIGAELIA------GVPGLGKEILLSQSVPDRMFALIIVAGLLGMLLAFAV 241

Query: 252 IFLYDQLL 259
           + + ++LL
Sbjct: 242 MAIENRLL 249


>gi|296125453|ref|YP_003632705.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296017269|gb|ADG70506.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 256

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FRV+    +A I+ IP+   +G+   I   I+P  Q L   PA  + PLVV     
Sbjct: 61  AISLFRVLSGFALAFIVSIPIAFLMGWYQPIQLLIEPIIQFLRNIPALAYIPLVVVA--- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +  +  ++++ I  T   ++  V  G         + A          +  +++P   
Sbjct: 118 QGVGESAKITVIFI-STFLVMIITVYQGVKEVDPTLIKAARVLGAKDKDIFLKVVIPASV 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY + G     G +    I +E+           GLG  I E++       V+LG++++ 
Sbjct: 177 PYILVGMRLGLGASLTTLIAAELTG------SNAGLGQMIQEASLYFRMDIVMLGIILIG 230

Query: 564 CFVLALN 570
              L LN
Sbjct: 231 ITGLVLN 237


>gi|115380392|ref|ZP_01467388.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
 gi|115362604|gb|EAU61843.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
          Length = 586

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + +L A  +SLL       +AA+  R   VL  +LD+MQ+IP   +L  T++ 
Sbjct: 395 QPTMETLVLVLVATALSLLLGVPLGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLML 454

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG      L+ +  +  + +  +T   Y  + ++P+++ E   +F     Q   
Sbjct: 455 FGLGVVPGL-----LSTVVFVLPAPI-RLT---YLGITSVPKEMIEAGEAFGARPLQLLV 505

Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++    + G+   +M+S+S     VV + ++  G       G+GS +  A+   D
Sbjct: 506 KIELPYARKAILEGVTQALMLSLS----MVVIAALVGAG-------GLGSRVVRALNTVD 554

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  L D++   P
Sbjct: 555 IRQGFEAGLVIVILAILLDRMFKHP 579


>gi|91223853|ref|ZP_01259117.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 12G01]
 gi|91191345|gb|EAS77610.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 12G01]
          Length = 361

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL + L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F   
Sbjct: 141 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 197

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G  +  IFA+    V  +T    Q    +P +L E   SF  +  Q  + + +P
Sbjct: 198 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 252

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            ++P    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 253 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|163846397|ref|YP_001634441.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222524164|ref|YP_002568635.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163667686|gb|ABY34052.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222448043|gb|ACM52309.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 268

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    L    ++L+   +     A  R L   L P+L   Q+IP++      +++
Sbjct: 73  QHTLATLSAALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILW 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+ A L     I  + V         ++ +IPR+L E++     + WQ   Y
Sbjct: 133 FGAGLTSKVLVAALITFLPILINTV--------VAIRSIPRELIEMAYISGANRWQLLRY 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P ++P L   +   ++      +A+   VVG+ V    G+G+ I +A    D   I 
Sbjct: 185 VEAPLALPVLFGGVRTGLA------LATTGAVVGEFVAGRVGLGALINIARGLFDTPLIF 238

Query: 243 YAMLTMLGV---IFLYDQLLFRPMIVWSNK 269
            A+ T+  +   +++   LL R ++ W   
Sbjct: 239 VALATLALITLTLYVLAGLLERLLVRWEAS 268


>gi|312278354|gb|ADQ63011.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P ++++  IP  + GF+   VV  F+    G      L+  F +F   +  +TF    
Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V  
Sbjct: 178 ALRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGN 237

Query: 217 DTVIP 221
             VIP
Sbjct: 238 SVVIP 242


>gi|295096321|emb|CBK85411.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 263

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 85/179 (47%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 VQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGFALFTHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    ILYA+L  L  +    Q L R  + W+  +  +   
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAYTAQEAK 262


>gi|257466076|ref|ZP_05630387.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917232|ref|ZP_07913472.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691107|gb|EFS27942.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 251

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPV 404
           +FW+C+   +   +    +  +   FT       IW+   ++++RV++ I++ ++  IP+
Sbjct: 16  LFWYCMSIVLKKDLLPNPMITLETTFTLLITSSQIWIHVLVSLYRVMLGILLGTVFSIPM 75

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +G+   I          L   P  VF P+    +    L+    ++ ++ F     I
Sbjct: 76  GILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFFQQTILI 135

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS--- 521
             NV        N  +E+  S  I    +W+ II   +FP  ++G  T+   +   S   
Sbjct: 136 RDNV-------KNISEEIYDSIRILQASFWQ-IIQHVVFPSCLSGIFTSVKSSLGISFAL 187

Query: 522 --IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             I    AS        +GLG +I +  ++  +  +   +LI+
Sbjct: 188 LFITENFAS-------QSGLGYFITKCMDRRDYVTMYAAILIL 223


>gi|218531602|ref|YP_002422418.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|240140097|ref|YP_002964574.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens AM1]
 gi|218523905|gb|ACK84490.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
 gi|240010071|gb|ACS41297.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens AM1]
          Length = 287

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP +   +  R+LS  + +L           +SR    +L+P L++++ IP + ++   
Sbjct: 85  ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F +        +E++  F  FT  ++ +  +    + ++   L   +RS        
Sbjct: 145 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              + +P + P +V    + M   WF +V +EMI
Sbjct: 197 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 230



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   + A  + + +G+ IG        + P  ++L   PA  + PL +       
Sbjct: 93  SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++    ++ +   G  + IL N + G  +        A S         R +ILPG  P 
Sbjct: 153 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++
Sbjct: 209 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 259


>gi|194289882|ref|YP_002005789.1| alkanesulfonate transporter; ABC superfamily, membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223717|emb|CAQ69724.1| alkanesulfonate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 267

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 21/163 (12%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    +L   L ++++IP L  +   +++F      K+    L   F ++         +
Sbjct: 99  RTAATLLDSTLQMVRNIPALALIPLVILWFGIDESAKLFLVSLGVFFPVY--------LN 150

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  + ++   L E++RS+ LSGWQ +  + +P ++PG++  +  ++   W       ++
Sbjct: 151 TYHGIRSVDAGLVEMARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWV------VL 204

Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLG 250
           +V +T+    GIG Y+ +  +E    D++ +   LYA+L  L 
Sbjct: 205 IVAETISAQSGIG-YMTMNAREFLQTDVVLVGILLYALLGKLA 246



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++ +  L  L+  G  + +  N   G  +      E+
Sbjct: 110 QMVRNIPALALIPLVIL---WFGIDESAKL-FLVSLGVFFPVYLNTYHGIRSVDAGLVEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GW+ +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCC-------FVLALNRF--LWHPLY 578
              + E      V++G+L+              L R+   WHP Y
Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264


>gi|209552006|ref|YP_002283922.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539599|gb|ACI59530.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 305

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVW 148
           AAKS R   VL PILD+MQ+IP   +L   V+ F     G V G  +  I+A+    ++ 
Sbjct: 120 AAKSERFWTVLRPILDLMQTIPSFVYLVPIVMLF---SIGNVSGVIVTCIYALAPVVRLT 176

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           N+     +S      D+ E S +F  S  Q    + +P +MP
Sbjct: 177 NLGIRQVRS------DMVEASNAFGASKRQTLVKVELPLAMP 212


>gi|66047934|ref|YP_237775.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|71734104|ref|YP_276848.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257483034|ref|ZP_05637075.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624806|ref|ZP_06457760.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650617|ref|ZP_06481960.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298489209|ref|ZP_07007228.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|63258641|gb|AAY39737.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|71554657|gb|AAZ33868.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298156291|gb|EFH97392.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320326406|gb|EFW82459.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320330619|gb|EFW86597.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330871164|gb|EGH05873.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330954941|gb|EGH55201.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae Cit 7]
 gi|330970917|gb|EGH70983.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|330985873|gb|EGH83976.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331011730|gb|EGH91786.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 281

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|34498311|ref|NP_902526.1| taurine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34104165|gb|AAQ60524.1| taurine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 282

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+L+  + +P L +L   V++F        IG EL+ +  IF + +  +  +    +
Sbjct: 121 LLDPMLEAYRPVPPLAYLPLIVIWFG-------IG-ELSKVLLIFLAILAPVAIATRHGV 172

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + R+    ++S   S  Q  W + +P ++P ++  + + +  GW  +VA+E++  
Sbjct: 173 AQVGRNRLRAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAA 229


>gi|110640632|ref|YP_668360.1| taurine transporter subunit [Escherichia coli 536]
 gi|170683056|ref|YP_001742499.1| taurine transporter subunit [Escherichia coli SMS-3-5]
 gi|191173479|ref|ZP_03035006.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215485455|ref|YP_002327886.1| taurine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|300936349|ref|ZP_07151277.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300997448|ref|ZP_07181788.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|312964620|ref|ZP_07778871.1| taurine transport system permease protein tauC [Escherichia coli
           2362-75]
 gi|331645540|ref|ZP_08346644.1| taurine transport system permease protein TauC [Escherichia coli
           M605]
 gi|331671925|ref|ZP_08372721.1| taurine transport system permease protein TauC [Escherichia coli
           TA280]
 gi|331681761|ref|ZP_08382394.1| taurine transport system permease protein TauC [Escherichia coli
           H299]
 gi|110342224|gb|ABG68461.1| taurine transport system permease protein TauC [Escherichia coli
           536]
 gi|170520774|gb|ACB18952.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|190906188|gb|EDV65800.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215263527|emb|CAS07855.1| taurine transporter subunit TauC, membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|281177541|dbj|BAI53871.1| taurine ABC transporter permease component [Escherichia coli SE15]
 gi|300304267|gb|EFJ58787.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300458455|gb|EFK21948.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|312290641|gb|EFR18519.1| taurine transport system permease protein tauC [Escherichia coli
           2362-75]
 gi|324010127|gb|EGB79346.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324010718|gb|EGB79937.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|330910161|gb|EGH38671.1| taurine transport system permease protein TauC [Escherichia coli
           AA86]
 gi|331045702|gb|EGI17828.1| taurine transport system permease protein TauC [Escherichia coli
           M605]
 gi|331070914|gb|EGI42273.1| taurine transport system permease protein TauC [Escherichia coli
           TA280]
 gi|331080963|gb|EGI52128.1| taurine transport system permease protein TauC [Escherichia coli
           H299]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|67923047|ref|ZP_00516540.1| Binding-protein-dependent transport systems inner membrane
           component [Crocosphaera watsonii WH 8501]
 gi|67855126|gb|EAM50392.1| Binding-protein-dependent transport systems inner membrane
           component [Crocosphaera watsonii WH 8501]
          Length = 297

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A++  L+       ++AK+  L  V+ P+LD+MQ++P   +L   V+ F     G+V
Sbjct: 120 VVTAVLFCLMVGIPVGVISAKNDPLERVIRPLLDVMQTLPSFVYLVPVVMLFGI---GEV 176

Query: 132 IGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G     IFAI    ++ N+       +  +  ++ E + +F  + WQ  W   +P +MP
Sbjct: 177 PGVIATIIFAIPPLIRLTNL------GIRQVSPEVTEAAIAFGSTPWQVLWEAQIPLAMP 230

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++       V + MI V       PG+G  +   +   D   +  A +  LG
Sbjct: 231 TILAGVNQAILMALSMSVVTSMIAV-------PGLGQMVLQGVGRLD---VGLAAVGGLG 280

Query: 251 VIFL 254
           ++ L
Sbjct: 281 IVLL 284


>gi|332703713|ref|ZP_08423801.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553862|gb|EGJ50906.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 281

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 29/196 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A  ++++       L A S+    +++P+LD MQ++P   +L   + +F         
Sbjct: 101 LVATSLAIIIGMPLGILTALSQPAYRLIMPVLDFMQTMPAFVYLIPAIPFF--------- 151

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188
              L  + AIF++ ++ M  ++  +   +  +PR+L E S +F  +  QK   L +P + 
Sbjct: 152 --GLGKVAAIFSTVIFAMPPAIRLTCLGIRQVPRELVEASDAFGATRGQKLLKLQLPMAA 209

Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
              M G+   +M+++S          M+VV   +I   G+G  +  AI+  D      A 
Sbjct: 210 STIMAGVNQTVMLALS----------MVVVA-AMIGAKGLGGEVWKAIQRLDPARGFEAG 258

Query: 246 LTMLGVIFLYDQLLFR 261
           L ++ V  ++D+++ R
Sbjct: 259 LGIVIVAMIFDRVMQR 274


>gi|325122236|gb|ADY81759.1| sulfate ester transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 279

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 469 IAGASA---FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           +A A A    P  + E+   + +    W R IILP I P  + G   A G AW   +  E
Sbjct: 161 LAAADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIALGRAWLILVAVE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S G      TG+G  +    +      V++GV I       L++ L
Sbjct: 221 LLSAG------TGIGQMMELGRQMLRLDVVMVGVFITGVVGFGLDKVL 262


>gi|315925947|ref|ZP_07922152.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620768|gb|EFV00744.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 78/153 (50%), Gaps = 15/153 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ I  + ++ F V++F        IG +  A+  IF + ++ +  +  +++  I
Sbjct: 103 PVVQLLRPIAPVAWMPFIVLWFG-------IG-DAPAVAIIFIAGLFPVLLATARAVGQI 154

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +V+ +F +SGWQK   +  P + P ++ ++  ++   W F+V+ EM+        
Sbjct: 155 APIYWQVADNFGMSGWQKIAKIVCPAAFPQIMASLQAAIGTAWIFLVSGEMVGAQS---- 210

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             G+G ++ +  K       L A++T++G+I L
Sbjct: 211 --GLG-FLIMDCKNAIRSDALLAVMTVIGIIGL 240


>gi|304406597|ref|ZP_07388253.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304344655|gb|EFM10493.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 280

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+   + P + +++++P+L      +++F      KV+   L A F ++ +       
Sbjct: 112 SRRVEEYVNPTVQMIRTVPLLAITPLFIMWFGFGELSKVLLISLGAFFPLYVN------- 164

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  + N+   L EVSR  + S +++   L +P ++P ++  + +S+S  W  +V +E+
Sbjct: 165 -TFLGVRNVDAKLFEVSRVLQFSRYRQIVKLIIPAALPNILLGVRLSLSISWLVLVVAEL 223

Query: 213 I 213
           +
Sbjct: 224 V 224


>gi|90020770|ref|YP_526597.1| ABC transporter permease [Saccharophagus degradans 2-40]
 gi|89950370|gb|ABD80385.1| binding-protein-dependent transport systems inner membrane
           component [Saccharophagus degradans 2-40]
          Length = 271

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    +  RML  + I+ L       L      LG  L P++  +  IP +  L    + 
Sbjct: 74  QDTKSSLKRMLMGLAIAALIGLTIGLLTGAIPMLGANLTPLVTAISLIPPMAILPILFIV 133

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           EL+ +  I       MT  +YQ    +PR+    +++      Q    
Sbjct: 134 FGL--------GELSKVVLIVIGIAPFMTRDIYQRTKELPREQLVKAQTLGAHSGQIIVR 185

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P  +P L+  + +S+   W F++A+E I   D      G+G  I L  +   +  IL
Sbjct: 186 VLLPQILPRLIDAVRLSLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYMSMDVIL 239

Query: 243 YAMLTMLGVIFLYDQLLFR 261
             ++ +  + FL D +L R
Sbjct: 240 PYVIWITFLAFLLDWMLVR 258


>gi|33862827|ref|NP_894387.1| glycine betaine/proline ABC transporter [Prochlorococcus marinus
           str. MIT 9313]
 gi|33634743|emb|CAE20729.1| ABC transporter,membrane component, glycine betaine/proline family
           [Prochlorococcus marinus str. MIT 9313]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A +++L+        +A+ + +  +  P+LD+MQ++P   +L   V++F        
Sbjct: 105 VIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPAVMFFGT------ 158

Query: 132 IGAELAAIFAIFTSQVWNMTFSM-------YQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     +  S +  + FSM       Y  +  +P DL E  R+F  S  Q  W + 
Sbjct: 159 ---------GLVPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQLLWKVQ 209

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +P ++P L+  +  ++      VV + MI
Sbjct: 210 LPNALPTLMAGVNQTIMLALSMVVIASMI 238


>gi|323191477|gb|EFZ76739.1| taurine transport system permease protein tauC [Escherichia coli
           RN587/1]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|302529978|ref|ZP_07282320.1| predicted protein [Streptomyces sp. AA4]
 gi|302438873|gb|EFL10689.1| predicted protein [Streptomyces sp. AA4]
          Length = 234

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + ++++P LG +TF  + F       +IG  + AI  +            Y  L     D
Sbjct: 65  NAIRALPTLGLVTFLFLLFTESTTATIIGLVVLAIPPVLAGT--------YAGLQAAEHD 116

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190
           + + ++   ++GWQ+ W + VP ++P
Sbjct: 117 VVDAAQGIGMTGWQRLWQVEVPIALP 142


>gi|238790131|ref|ZP_04633908.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia frederiksenii ATCC 33641]
 gi|238721800|gb|EEQ13463.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia frederiksenii ATCC 33641]
          Length = 357

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 227 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|288576399|ref|ZP_05978724.2| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria mucosa ATCC
           25996]
 gi|288565600|gb|EFC87160.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria mucosa ATCC
           25996]
          Length = 509

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + TL  L   +I+LL     A  LA   A  RR    ++ + +I+Q+IP L  L   + +
Sbjct: 14  QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLIPF 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P  +I   L A+  IF +         Y  L  I   ++E   +F LS WQ  W 
Sbjct: 74  VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125

Query: 183 LGVPFSMPGLV 193
           + +P ++P ++
Sbjct: 126 IELPMALPAMI 136


>gi|121610087|ref|YP_997894.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121554727|gb|ABM58876.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 298

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 14/131 (10%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +   + +++   +  + W+ +RY++ P   PY++ G   A G +   ++V
Sbjct: 171 ILSNTVIGLKSADRNLRDLFWLYRASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 230

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573
           +E  +      + TGL + I ES+ +   P +        +LG++I   F  AL+R +  
Sbjct: 231 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFVLFA-ALSRLVLG 287

Query: 574 -WHPLYLYGTR 583
            WH   +   R
Sbjct: 288 HWHESEMQHER 298


>gi|257067547|ref|YP_003153802.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease
           [Brachybacterium faecium DSM 4810]
 gi|256558365|gb|ACU84212.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Brachybacterium faecium DSM 4810]
          Length = 278

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 6/125 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R++V   + ++  I VG+ +G    +++ + P    L   P    FP+++       
Sbjct: 86  TLMRLLVGGGLGALAGIVVGLLMGSSRALNAALGPLFSALYPLPKIAIFPILLMI----- 140

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             P     ++ +F T ++IL  N ++G  A      E  +++  TG+  +R+++LPG  P
Sbjct: 141 FGPTETPKIIAVFITTFFILQINTVSGVWAIDRKLLEAGTAYGATGFARFRFVVLPGAMP 200

Query: 505 YYVTG 509
           +  +G
Sbjct: 201 FVFSG 205


>gi|134098793|ref|YP_001104454.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005853|ref|ZP_06563826.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911416|emb|CAM01529.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 295

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +L A +I+++       LAA+ RR+ +V+ P+LD+MQ++P   +L   V++F 
Sbjct: 95  AMQTLALVLVASIIAVVIAIPVGILAARHRRVSLVVRPVLDLMQTMPAFVYL-IPVIFFF 153

Query: 125 NLYPGKVIGAELAAIFAI 142
           N+  G V G     IFA+
Sbjct: 154 NI--GSVPGVVATVIFAL 169


>gi|299772083|ref|YP_003734109.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter sp. DR1]
 gi|298702171|gb|ADI92736.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter sp. DR1]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 88/186 (47%), Gaps = 23/186 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            SR    +L   L ++++IP L  +   +++F           E A +F +     + + 
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPIY 147

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W       
Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201

Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMIV 265
           +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R ++ 
Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLLR 258

Query: 266 WSNKFR 271
           W + ++
Sbjct: 259 WHSGYQ 264



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         VLA  L R+L  WH  Y
Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHSGY 263


>gi|257452130|ref|ZP_05617429.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Fusobacterium sp. 3_1_5R]
 gi|317058675|ref|ZP_07923160.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium sp. 3_1_5R]
 gi|313684351|gb|EFS21186.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium sp. 3_1_5R]
          Length = 251

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-CITMFRVVVLIIIASIIWIPV 404
           +FW+C+   +   +    +  +   FT       IW+   ++++RV++ I++ ++  IP+
Sbjct: 16  LFWYCMSIVLKKDLLPNPMITLETTFTLLITSSRIWIHILVSLYRVMLGILLGTVFSIPM 75

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +G+   I          L   P  VF P+    +    L+    ++ ++ F     I
Sbjct: 76  GILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFFQQTILI 135

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS--- 521
             NV        N  +E+  S  I    +W+ II   +FP  ++G  T+   +   S   
Sbjct: 136 RDNV-------KNISEEIYDSIRILQASFWQ-IIQHVVFPSCLSGIFTSVKSSLGISFAL 187

Query: 522 --IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             I    AS        +GLG +I +  ++  +  +   +LI+
Sbjct: 188 LFITENFAS-------QSGLGYFITKCMDRRDYVTMYAAILIL 223


>gi|302539457|ref|ZP_07291799.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302448352|gb|EFL20168.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 295

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 10/166 (6%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W S+  +    T  DVL+       +++R +   ++A +I  P+G+ +     + + + P
Sbjct: 79  WDSLADLWFKGTLFDVLWT------SVWRGLSGFLLALVIGTPLGLLVARVRFVRAAVGP 132

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L + P+  + P     V +  L+ N  +  +++ G    I   +++G    P  F 
Sbjct: 133 VLSGLQSLPSVAWVP---PAVLWLGLD-NSMMYAVILLGATPSIANGLVSGIDQVPPLFL 188

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               S   TG R  RY+++P   P Y+ G       +W + + +E+
Sbjct: 189 RAGRSLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLMAAEI 234


>gi|160902588|ref|YP_001568169.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160360232|gb|ABX31846.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 216

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 9/106 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +Y T   K +  G + + I  I Q++P +  +   V  FM + P         AIFA+F 
Sbjct: 41  IYVTRPGKEKS-GRIALSITGIAQAVPSIAVIAL-VFLFMGIGPAP-------AIFALFL 91

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             +  +TF+    L  I + ++E +R   ++  +  W + +P ++P
Sbjct: 92  YSIVPITFNTASGLFGIDKGMKEAARGMGMTKREILWKVEIPNAIP 137


>gi|134097165|ref|YP_001102826.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005378|ref|ZP_06563351.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909788|emb|CAL99900.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV++   L  I   R+    +IA ++ + +G  +G          P    + A P  V 
Sbjct: 58  SDVVFSDLLASIG--RIAAGWLIAVVVGVGIGTALGRSRTAMDYFGPLFAFVRAIPPPVL 115

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +  +    +  ++ ++++ +FG  W IL N + G  +      + A SF I   +W
Sbjct: 116 VPVFMVLLG---IGTSMQITVI-VFGVVWPILLNTVDGVRSVDQVKVDTARSFRIPPVQW 171

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P    G   +   A    +VSE+         T G+G  +  S ++   P
Sbjct: 172 VFGVVLPAAMPKIFAGLRVSLSLALVLMVVSELVG------STNGIGYQLVNSQQQFDLP 225

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +  G++++     ALN  L
Sbjct: 226 GMWTGIVLLGVLGYALNTVL 245


>gi|241895789|ref|ZP_04783085.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Weissella
           paramesenteroides ATCC 33313]
 gi|241870832|gb|EER74583.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Weissella
           paramesenteroides ATCC 33313]
          Length = 255

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 24/184 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R  + ++I   I   +G+  G     +       Q++   P     PL++      
Sbjct: 66  ISLYRATIGLLIGGTIGFTLGVANGLSRISNLLFNSTVQMIRNIPHLALIPLII------ 119

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                +WL +       L+  G  + I  N + G  +      E+  S+ ++ W+    I
Sbjct: 120 -----IWLGIGEPAKVTLVAIGVMFPIYINTLHGIQSIDPKLIEMGRSYQLSKWQMLTKI 174

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I PG  P  + G   A G  W   IVSE  S       ++G+G     + +    P + L
Sbjct: 175 IFPGAMPTILMGIRYALGVMWTTLIVSETIS------SSSGIGYMETNAQQFLDMPTIFL 228

Query: 558 GVLI 561
            ++I
Sbjct: 229 AIII 232


>gi|226356352|ref|YP_002786092.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318342|gb|ACO46338.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 278

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)

Query: 107 MQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +QSIP + F+ F +++F +N         E A +F +       +  ++  +L N+P  L
Sbjct: 122 LQSIPSIAFVPFAILFFGLN---------ERAVLFVVILEGFIPVALAVSGALLNVPPAL 172

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
               R+    G    W + +P S+P L+  +  + S  W  +V  E+++ G
Sbjct: 173 RIAGRTLGARGLALTWRVLLPASVPNLLTGLRTAWSFAWRALVGGELLIAG 223


>gi|213971168|ref|ZP_03399286.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382297|ref|ZP_07230715.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302058532|ref|ZP_07250073.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato K40]
 gi|213924037|gb|EEB57614.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A++  IPVGI IG          P  + 
Sbjct: 73  GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +  L L  L IF     I      G           A 
Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267


>gi|171778758|ref|ZP_02919854.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282715|gb|EDT48139.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 571

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS R+  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 120 AKSDRVRSIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  IP +L E + SF  +  Q+ + + +P +    + G+   +M+++S    
Sbjct: 177 L------GIREIPEELIEAAESFGSTEGQRLFKVELPLAKNTILAGVNQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  +VV  ++I  PG+G+ +  A++  ++ A   + L ++ +  + D+ +
Sbjct: 227 -------MVVTASMIGAPGLGNGVLSALQHAEIGAGFVSGLALVILAIIIDRFI 273



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 10/120 (8%)

Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W G I  F +V++  + SI I IP+GIW+     + S + P    +   PA V+    +
Sbjct: 90  LWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYL---I 146

Query: 439 SCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWR 495
             V+++ +   P ++ S+  IF     + F  + G    P +  E A SF  T G R ++
Sbjct: 147 PAVAFFGIGMVPGVFASV--IFALPPTVRFTNL-GIREIPEELIEAAESFGSTEGQRLFK 203


>gi|253573294|ref|ZP_04850637.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846822|gb|EES74827.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 274

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A I+ IP+G+ IG+ P     + P  +L     A    P+ +  +     +       
Sbjct: 90  LLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIGETSK----IA 145

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++F   W IL N IA          + A S  ++  + +  +ILP   P   TG   A 
Sbjct: 146 IVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVPTIFTGIRMAG 205

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            GA    I +E+           GLG  I  S      P++  G+L +    L +N
Sbjct: 206 TGAILVLIAAEMVGAKE------GLGYLITYSQYNFEIPKMYAGILAISLLGLIIN 255


>gi|148257597|ref|YP_001242182.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146409770|gb|ABQ38276.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 267

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 22/175 (12%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P DI       L    L ++A+ +  R     V+  L   V   L A+  RL   + P+L
Sbjct: 45  PTDIFKSSLELLQSGELAKHAAISARRAAGGFVVGALPAIVIGLLTARLPRLAAYVDPLL 104

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            + +SIP L  + F V +F      K+      A+ A      W++ F ++    N    
Sbjct: 105 QMFRSIPPLALVPFGVFWFGIGETSKI------ALVA------WSVFFPVW---VNTEAG 149

Query: 165 LEEVS-----RSFRLSG--WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + EVS      +F L    WQ F+++ +P ++P ++  + +S+S     +VA+E+
Sbjct: 150 VREVSPLLVRAAFCLGAKRWQMFFFVHLPAALPYIITGLKVSLSAAISTLVAAEL 204


>gi|225868631|ref|YP_002744579.1| phosphate ABC transporter permease [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701907|emb|CAW99412.1| putative phosphate ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 311

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 6/167 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116
           +LP  A    + +LSA+V +         +   S + G  L+ P ++++  IP  + GF+
Sbjct: 84  ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              VV  +  +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMP 249


>gi|222081336|ref|YP_002540699.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726015|gb|ACM29104.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 268

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 24/164 (14%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILF 466
           I   + P  Q L   P   + PL +           LW  L       L+  G  + +L 
Sbjct: 103 IERYLNPVIQFLRPIPPIAYIPLAI-----------LWFGLGNPPAIFLIAIGAFFPVLI 151

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I+G     + +   A++        +R +ILP   PY +TG     G A+   IV+E+
Sbjct: 152 NTISGVRNVDSIYVRAATNLGADRLTLFRRVILPAATPYILTGMRIGIGTAFIVVIVAEM 211

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +        +GLG  I E+ E     +V+ G++ +    LA++
Sbjct: 212 IAV------NSGLGYRILEAREYMWSDKVIAGMIAIGLLGLAID 249


>gi|146342347|ref|YP_001207395.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195153|emb|CAL79178.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 255

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW S+   +  FT  D+L  +     T+  +    ++ASI+ I +G  IG    + S + 
Sbjct: 43  AWASL---LRGFTSGDLLTKL---AGTLAHMAYGWLLASIVGIALGAMIGSSKAMRSYVA 96

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  +LL   P +   P+ ++ +    L+ ++ L  ++ FG+ W +L   I G +A     
Sbjct: 97  PTLELLRPLPVSAIIPVAIAALG---LSQSMAL-FVIAFGSLWPMLLGTIHGFAAVEPRL 152

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            EVA   H++       I LP   P  + G
Sbjct: 153 YEVARVLHMSRLAVIFKIALPSAAPDILAG 182


>gi|116490694|ref|YP_810238.1| spermidine/putrescine ABC transporter permease protein [Oenococcus
           oeni PSU-1]
 gi|290890109|ref|ZP_06553192.1| hypothetical protein AWRIB429_0582 [Oenococcus oeni AWRIB429]
 gi|116091419|gb|ABJ56573.1| spermidine/putrescine ABC transporter permease protein [Oenococcus
           oeni PSU-1]
 gi|290480300|gb|EFD88941.1| hypothetical protein AWRIB429_0582 [Oenococcus oeni AWRIB429]
          Length = 272

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           M   ++ +L  I RDL + SR    + WQ  W L +P SMPG+
Sbjct: 153 MILPIFNALNEIDRDLVQASRDLGANSWQTLWRLIIPLSMPGV 195


>gi|297201640|ref|ZP_06919037.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197710988|gb|EDY55022.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 289

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 11/169 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTT---LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           + D+     D  S P Y +  T    R+L+  +++ +       L A+SR    +L P+L
Sbjct: 41  VTDVASAFADRLSGPDYWTDLTDSLTRILTGFLLAAVLGVATGVLIARSRLAEDLLGPVL 100

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++++ IP +  +   ++ F +         E   +F  FT+  + +  S   ++  +   
Sbjct: 101 EVVRPIPAIALVPVAILLFPS--------NEQGIVFITFTAAFFPVLVSTRHAVRALTPV 152

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            EE   +     W+    + +P ++PG+   + + +   W  V+++EMI
Sbjct: 153 WEEAVLTMGGGRWRILASVVLPGALPGIFGGLSVGIGVSWICVISAEMI 201


>gi|146340088|ref|YP_001205136.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192894|emb|CAL76899.1| Putative ABC transporter permease [Bradyrhizobium sp. ORS278]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ AIF +F +  + +  S    + ++P +   V+R    +  Q FW + +P  +P L 
Sbjct: 148 GDVPAIFLVFITVFFTIVLSTSAQIESVPVNYIHVARIMGATQTQLFWRVILPSILPSLF 207

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++ G W  V+ +E + VG       G+G  I++A    +   + + M  +  + F
Sbjct: 208 MTLRLNLFGAWMVVLIAETVGVGT------GLGQIISMARATFNAKLVFFTMAVIGALGF 261

Query: 254 LYD 256
           L D
Sbjct: 262 LSD 264


>gi|301169059|emb|CBW28656.1| taurine transporter subunit [Haemophilus influenzae 10810]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRITVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|195978039|ref|YP_002123283.1| phosphate transport system permease protein PstC [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|225870417|ref|YP_002746364.1| phosphate ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|195974744|gb|ACG62270.1| phosphate transport system permease protein PstC [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|225699821|emb|CAW93655.1| putative phosphate ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 311

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 6/167 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116
           +LP  A    + +LSA+V +         +   S + G  L+ P ++++  IP  + GF+
Sbjct: 84  ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              VV  +  +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMP 249


>gi|163843831|ref|YP_001628235.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|163674554|gb|ABY38665.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
          Length = 278

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +      +  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|118586187|ref|ZP_01543657.1| spermidine/putrescine ABC transporter permease protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433373|gb|EAV40069.1| spermidine/putrescine ABC transporter permease protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 272

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           M   ++ +L  I RDL + SR    + WQ  W L +P SMPG+
Sbjct: 153 MILPIFNALNEIDRDLVQASRDLGANSWQTLWRLIIPLSMPGV 195


>gi|68248959|ref|YP_248071.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae 86-028NP]
 gi|145628710|ref|ZP_01784510.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.1-21]
 gi|145640305|ref|ZP_01795889.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae R3021]
 gi|148825362|ref|YP_001290115.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae PittEE]
 gi|260582552|ref|ZP_05850342.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127]
 gi|319775776|ref|YP_004138264.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae F3047]
 gi|319896686|ref|YP_004134879.1| abc-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Haemophilus influenzae F3031]
 gi|329123618|ref|ZP_08252178.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
 gi|68057158|gb|AAX87411.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 86-028NP]
 gi|144979180|gb|EDJ88866.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.1-21]
 gi|145274891|gb|EDK14753.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.4-21]
 gi|148715522|gb|ABQ97732.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittEE]
 gi|260094363|gb|EEW78261.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127]
 gi|317432188|emb|CBY80540.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae F3031]
 gi|317450367|emb|CBY86583.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae F3047]
 gi|327469817|gb|EGF15282.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|293611277|ref|ZP_06693575.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826528|gb|EFF84895.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124007|gb|ADY83530.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + +
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W      
Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R ++
Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLL 257

Query: 265 VWSNKFR 271
            W + ++
Sbjct: 258 RWHSGYQ 264



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         VLA  L R+L  WH  Y
Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHSGY 263


>gi|331651296|ref|ZP_08352321.1| taurine transport system permease protein TauC [Escherichia coli
           M718]
 gi|331051037|gb|EGI23089.1| taurine transport system permease protein TauC [Escherichia coli
           M718]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|148560547|ref|YP_001259451.1| putative glycine betaine/L-proline ABC transporter permease
           [Brucella ovis ATCC 25840]
 gi|225628017|ref|ZP_03786053.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|254702297|ref|ZP_05164125.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella suis bv. 5 str. 513]
 gi|254710612|ref|ZP_05172423.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella pinnipedialis B2/94]
 gi|254714795|ref|ZP_05176606.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M644/93/1]
 gi|254717856|ref|ZP_05179667.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M13/05/1]
 gi|256032106|ref|ZP_05445720.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella pinnipedialis M292/94/1]
 gi|256369995|ref|YP_003107506.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella microti CCM 4915]
 gi|260169241|ref|ZP_05756052.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella sp. F5/99]
 gi|261219703|ref|ZP_05933984.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261318185|ref|ZP_05957382.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261322592|ref|ZP_05961789.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261752865|ref|ZP_05996574.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261758754|ref|ZP_06002463.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265989216|ref|ZP_06101773.1| glycine betaine/L-proline ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|294852895|ref|ZP_06793568.1| choline ABC transporter [Brucella sp. NVSL 07-0026]
 gi|306843073|ref|ZP_07475696.1| choline ABC transporter, permease protein [Brucella sp. BO2]
 gi|306844580|ref|ZP_07477167.1| choline ABC transporter, permease protein [Brucella sp. BO1]
 gi|148371804|gb|ABQ61783.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ovis ATCC 25840]
 gi|225617180|gb|EEH14226.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|256000158|gb|ACU48557.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella microti CCM 4915]
 gi|260924792|gb|EEX91360.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261295282|gb|EEX98778.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261297408|gb|EEY00905.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261738738|gb|EEY26734.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261742618|gb|EEY30544.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|264661413|gb|EEZ31674.1| glycine betaine/L-proline ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|294821484|gb|EFG38483.1| choline ABC transporter [Brucella sp. NVSL 07-0026]
 gi|306275024|gb|EFM56787.1| choline ABC transporter, permease protein [Brucella sp. BO1]
 gi|306286752|gb|EFM58302.1| choline ABC transporter, permease protein [Brucella sp. BO2]
          Length = 278

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +      +  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|124023400|ref|YP_001017707.1| glycine/bertaine ABC transporter permease [Prochlorococcus marinus
           str. MIT 9303]
 gi|123963686|gb|ABM78442.1| ABC transporter,membrane component, glycine betaine/proline family
           protein [Prochlorococcus marinus str. MIT 9303]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A +++L+        +A+ + +  +  P+LD+MQ++P   +L   V++F        
Sbjct: 105 VIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPAVMFFGT------ 158

Query: 132 IGAELAAIFAIFTSQVWNMTFSM-------YQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     +  S +  + FSM       Y  +  +P DL E  R+F  S  Q  W + 
Sbjct: 159 ---------GLVPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQLLWKVQ 209

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +P ++P L+  +  ++      VV + MI
Sbjct: 210 LPNALPTLMAGVNQTIMLALSMVVIASMI 238


>gi|52080989|ref|YP_079780.1| glycine betaine ABC transporter permease [Bacillus licheniformis
           ATCC 14580]
 gi|52786365|ref|YP_092194.1| OpuAB [Bacillus licheniformis ATCC 14580]
 gi|319645053|ref|ZP_07999286.1| OpuAB protein [Bacillus sp. BT1B_CT2]
 gi|52004200|gb|AAU24142.1| glycine betaine ABC transporter (permease) [Bacillus licheniformis
           ATCC 14580]
 gi|52348867|gb|AAU41501.1| OpuAB [Bacillus licheniformis ATCC 14580]
 gi|317392862|gb|EFV73656.1| OpuAB protein [Bacillus sp. BT1B_CT2]
          Length = 284

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ++++++IS++         ++ + +  V+ PILD+MQ++P   +L    ++F N+
Sbjct: 95  QTLALVVTSVLISVIIGIPVGIWGSQKKTVRRVVTPILDLMQTMPAFVYL-LPAIFFFNI 153

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT    Q    +P DL E + +F  +  Q+ + + +P
Sbjct: 154 --GVVPGVVASVIFAM--PPTIRMTILGIQ---QVPEDLIEATEAFGSTTSQRLFKVQLP 206

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+  +++  PG+G  +  A+ +
Sbjct: 207 LATKTILAGINQSI------MLALSMVVIA-SMVGAPGLGEEVYRAVTQ 248


>gi|16272305|ref|NP_438518.1| ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580580|ref|ZP_05848408.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW]
 gi|2501390|sp|Q57306|Y355_HAEIN RecName: Full=Probable ABC transporter permease protein HI_0355
 gi|1573324|gb|AAC22015.1| ABC transporter, permease protein [Haemophilus influenzae Rd KW20]
 gi|260092922|gb|EEW76857.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|86147801|ref|ZP_01066108.1| glycine betaine/L-proline transport system permease [Vibrio sp.
           MED222]
 gi|85834439|gb|EAQ52590.1| glycine betaine/L-proline transport system permease [Vibrio sp.
           MED222]
          Length = 364

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   SF  S  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 223 TILGIQ---QVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300


>gi|145638735|ref|ZP_01794344.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittII]
 gi|145272330|gb|EDK12238.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittII]
 gi|309750225|gb|ADO80209.1| Probable ABC transporter permease protein [Haemophilus influenzae
           R2866]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILIISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVNLMFAALLILVSISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|315181935|gb|ADT88848.1| glycine betaine/L-proline transport system permease [Vibrio
           furnissii NCTC 11218]
          Length = 368

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 172 ARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   +F  S  Q  + + +P +MP    G+   +M+S+S     
Sbjct: 227 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 279

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304


>gi|238762666|ref|ZP_04623635.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia kristensenii ATCC 33638]
 gi|238698971|gb|EEP91719.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia kristensenii ATCC 33638]
          Length = 358

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 173 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 227

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 228 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 280

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 281 VVIASMIAVG-------GLGQMVLRGIGRLDM 305


>gi|118589847|ref|ZP_01547251.1| putative ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437344|gb|EAV43981.1| putative ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 273

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ELA I  I       M  S  Q++ +IPR++   + +   S WQ    L +P  +P L+
Sbjct: 136 GELAKIALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMVTRLVLPQVLPHLI 195

Query: 194 WNMMMSMSGGWFFVVASEMI 213
            ++ +S+   W F++++E I
Sbjct: 196 TSLRLSLVPAWIFLISAEAI 215



 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 11/163 (6%)

Query: 379 VIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           ++WL    +++R+   + +++++ +  GI IGF PH+ S + P+    +  P     P++
Sbjct: 70  LLWLDSFDSLWRLGTGMAVSTLLALSFGIAIGFIPHVRSALAPYLATFSLIPPITILPIL 129

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L        L++ GT   ++ +        P +    A +   + W+    +
Sbjct: 130 FITFGLGELAKI----ALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMVTRL 185

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +LP + P+ +T    +   AW   I +E  +       T+GLG
Sbjct: 186 VLPQVLPHLITSLRLSLVPAWIFLISAEAIA------STSGLG 222


>gi|254513156|ref|ZP_05125222.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221533155|gb|EEE36150.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 421

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV   I  ++I IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   + W+  R++I+P   P 
Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK++         +F + +W MT +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIWETGKIV--------LLFLAALWIMTIAARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                  + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 316 NISKIHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|288919297|ref|ZP_06413632.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288349291|gb|EFC83533.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 339

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 12/207 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           +PP+  R   P +  L+A+ L  G+    L G +E   P D+V           L    +
Sbjct: 88  IPPWTRRLAGPALL-LVAWSLATGLN---LVGDRELAPPGDVVGAARELWSSGELADNLA 143

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+   ++I +      A +A   R    V+   ++ +++IP++  L   +V+    
Sbjct: 144 TSLFRVAWGLLIGVALGLALAVVAGFFRFGEDVVDSAMNFLRAIPVIALLPLIIVWIG-- 201

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                IG E A IF I     + +  + + ++  +   L E  R+F LS       + +P
Sbjct: 202 -----IGEE-AKIFLITVGVTFPIYMNTFAAIRGVDIKLVEAGRAFGLSRTGLIRRVIIP 255

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++PG +  +  SM   W  VV +E +
Sbjct: 256 GALPGFLVGLRWSMGVAWLLVVFAEQV 282


>gi|283785927|ref|YP_003365792.1| ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282949381|emb|CBG88992.1| ABC transporter permease protein [Citrobacter rodentium ICC168]
          Length = 385

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+I+Q+IP   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 215 VLNIIQTIPSVALFGLLIAPLAGLVKAFPWLASLGVAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  +PRD++E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VAGLDQVPRDVQESARAMGMSGVQRFLHVQLPLALP 310


>gi|221210668|ref|ZP_03583648.1| inner membrane protein [Burkholderia multivorans CGD1]
 gi|221169624|gb|EEE02091.1| inner membrane protein [Burkholderia multivorans CGD1]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A V+S+        LA++S  L  +L+P+LD+MQ++P   +L   ++ F   
Sbjct: 95  QTLALMLVATVLSVAIGVPLGILASRSAALRRMLLPVLDVMQTLPSFVYLIPVLMLF--- 151

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV  A LA I       +      + Q    +  D+ E +R+F  + WQ    + +P
Sbjct: 152 GLGKVP-AILATIIYALPPLIRLTDLGIRQ----VDPDVTEAARAFGTTRWQLLLNVQLP 206

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            + P    G+    MM++S     VV + MI
Sbjct: 207 LARPNIMAGINQTTMMALS----MVVIASMI 233


>gi|23502444|ref|NP_698571.1| glycine betaine/L-proline ABC transporter permease [Brucella suis
           1330]
 gi|161619521|ref|YP_001593408.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|254704827|ref|ZP_05166655.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|260565930|ref|ZP_05836400.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261755523|ref|ZP_05999232.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|23348434|gb|AAN30486.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella suis 1330]
 gi|161336332|gb|ABX62637.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260155448|gb|EEW90528.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261745276|gb|EEY33202.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +      +  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|256160302|ref|ZP_05457996.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M490/95/1]
 gi|256255506|ref|ZP_05461042.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti B1/94]
 gi|261222715|ref|ZP_05936996.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|265998679|ref|ZP_06111236.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti
           M490/95/1]
 gi|260921299|gb|EEX87952.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|262553303|gb|EEZ09137.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti
           M490/95/1]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V+F + 
Sbjct: 95  KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG      LA +  +  + +      +  +    P  L E   +F  S  Q  W + +
Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P++MP    GL   +M+S+S
Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225


>gi|226325516|ref|ZP_03801034.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758]
 gi|225206259|gb|EEG88613.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758]
          Length = 241

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 9/159 (5%)

Query: 56  LDVHSLPQYASRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +D  +L   ++  +LR+L +   I  +   +       S+R+   + PI+ ++  IP   
Sbjct: 35  IDDRALLLKSTLYSLRLLFTGYFIGAILGLITGVACGYSKRINYWVSPIIKMLGPIPSTT 94

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   +V   +L+ G V    L   FA        +T +    + N+ +   E +R+   
Sbjct: 95  WIPIIMVLVSSLFKGSVFIIALGVWFA--------LTIASSTGIQNVDKAYLEAARTLGA 146

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            G Q  + + +P +MP ++  M   MS     ++ +EM+
Sbjct: 147 KGHQLVFRVAIPHAMPNILQGMTQGMSSACTALLVAEMM 185


>gi|254455460|ref|ZP_05068889.1| glycine betaine ABC transport system integral membrane protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082462|gb|EDZ59888.1| glycine betaine ABC transport system integral membrane protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 709

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 26/228 (11%)

Query: 66  SRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL ++   V + + F  +   L ++S R    + P+LD MQ +P   +L F  ++F 
Sbjct: 134 SMQTLALMGLSVFLCVFFGVILGILCSQSNRFDNFMKPVLDTMQVMPAFVYL-FPALFFF 192

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +     I A +  I+A+    V  +T S    +  + ++  E + SF  S  Q  + + 
Sbjct: 193 GIGGAPAILATM--IYAM--PPVIRLTNS---GIRQVSKETIESATSFGSSKLQLLYKIK 245

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P    ++MM ++     ++ +  +VV    I   GIG  + LAI+  D+   +  
Sbjct: 246 IPLSLP----SIMMGINQ---VIMMALALVVLACFIGAEGIGGQVWLAIRNLDVGWAMEG 298

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
            L +L +  L+D+        +S  F  +  T   P+D    YL  +T
Sbjct: 299 GLCILFMAILFDR--------FSMSFSKQEET--LPSDVQKFYLLPQT 336


>gi|163732479|ref|ZP_02139924.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter litoralis Och 149]
 gi|161393839|gb|EDQ18163.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter litoralis Och 149]
          Length = 513

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   RP   S IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 345 LIGIPLGMFCARRPKFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P   +E A SF    W     + LP   P    G
Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLAAPSIRAG 451


>gi|91224154|ref|ZP_01259417.1| putative permease [Vibrio alginolyticus 12G01]
 gi|91191065|gb|EAS77331.1| putative permease [Vibrio alginolyticus 12G01]
          Length = 299

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  V+ P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNRIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+ + + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|332638601|ref|ZP_08417464.1| ABC-type proline/glycine betaine transport system, permease
           component [Weissella cibaria KACC 11862]
          Length = 572

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 31/156 (19%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149
           AK   +  ++ P+LD MQ++P   +L   V +F + + PG            +F S ++ 
Sbjct: 119 AKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFGIGVVPG------------VFASVIFA 166

Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSG 202
           +  ++  S   +  +P+DL E + S+  +  QK + L +P +    + G+   +M+++S 
Sbjct: 167 LPPTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIMLALS- 225

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                    M+V+  ++I  PG+G  +  A++  D+
Sbjct: 226 ---------MVVIA-SMIGAPGLGRGVLSAVQNADI 251


>gi|325264233|ref|ZP_08130965.1| nitrate transport permease protein NrtB [Clostridium sp. D5]
 gi|324030717|gb|EGB92000.1| nitrate transport permease protein NrtB [Clostridium sp. D5]
          Length = 262

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 17/196 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+V  I++S+    VG+ +G      +   P   ++   P   + PL +     +
Sbjct: 69  ISLSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAI----LW 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               N+ +  ++  G    ++ N +AGA     +   VA    +   R +  I+LP   P
Sbjct: 125 FGTGNVTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIVLPSCVP 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV----- 559
           Y  +G   +   +W A + +E+ +       T+G G  I    + G+    V+G+     
Sbjct: 185 YIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMGMISIGI 238

Query: 560 --LIMCCFVLALNRFL 573
             LI+  F+  + R L
Sbjct: 239 VGLILASFMRVMERRL 254


>gi|254775846|ref|ZP_05217362.1| ABC transporter permease protein [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +++ LR+L+   ++ +       L  +SR    V  P+ ++ + IP +  +   ++ F  
Sbjct: 84  AQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMVPVAILLFPT 143

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G V    LAA F I  S           ++  +P   E+  R+     WQ    + +
Sbjct: 144 DEAGIVFITFLAAYFPIMVST--------RHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 195

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P  +PG+   + + M   W  V+++EMI
Sbjct: 196 PGILPGVFGGLSVGMGVAWICVISAEMI 223


>gi|199597244|ref|ZP_03210675.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|258507902|ref|YP_003170653.1| phosphate ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258539148|ref|YP_003173647.1| phosphate ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|199591760|gb|EDY99835.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|257147829|emb|CAR86802.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257150824|emb|CAR89796.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259649229|dbj|BAI41391.1| phosphate ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 307

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 6/170 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113
           +V +LP       +  LSA+V +         +   S + G  VL P+++++  IP  + 
Sbjct: 79  EVGALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVY 138

Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +
Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  + + +  ++PG++  ++  M+  +   +A +M++    ++P
Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247


>gi|28867693|ref|NP_790312.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213967765|ref|ZP_03395912.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301382401|ref|ZP_07230819.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061206|ref|ZP_07252747.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302132422|ref|ZP_07258412.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28850928|gb|AAO54007.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213927541|gb|EEB61089.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|330874755|gb|EGH08904.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330965478|gb|EGH65738.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331015007|gb|EGH95063.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 281

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|331017063|gb|EGH97119.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 285

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A++  IPVGI IG          P  + 
Sbjct: 73  GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +  L L  L IF     I      G           A 
Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267


>gi|332715855|ref|YP_004443321.1| putative aliphatic sulfonates transport permease ssuC
           [Agrobacterium sp. H13-3]
 gi|325062540|gb|ADY66230.1| putative aliphatic sulfonates transport permease protein ssuC
           [Agrobacterium sp. H13-3]
          Length = 289

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 16/187 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+    VI  L   V  +L          L P    ++++P L ++   +++F    
Sbjct: 89  STARVFVGFVIGSLLAIVVGSLVGLVVAAERYLEPTFQALRAVPSLAWVPLLMIWFG--- 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               IG E + I  I  S  + +  +++  + N+ R L EV   +R       W + +P 
Sbjct: 146 ----IG-ETSKIVLIAKSAFFPVYLNLFSGIRNVDRKLVEVGEMYRQPLPVLVWRIFIPA 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA--LAIKEQDLLAILYAM 245
           S+P L   +   +S  W  VVA+E++   +      GIG  ++    +   DL+ I    
Sbjct: 201 SLPHLFTGLRYGLSLAWLSVVAAELLAASE------GIGYMLSDGRELSRPDLVMIAIIC 254

Query: 246 LTMLGVI 252
           L +LG I
Sbjct: 255 LAVLGKI 261


>gi|309388777|gb|ADO76657.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 250

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R L A  +++L     A L  + + L   L P++ I+Q+ P + +++  VV+F    
Sbjct: 58  TLKRTLIAYTLAVLVGITLALLLHRFQLLAKTLRPLITIIQATPPVLWVSLAVVWFG--- 114

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + A+L  IF IF   V  +  +++Q+L  +  DL E++ ++    ++    + +P 
Sbjct: 115 ----VSADLTPIFLIFIVSVPVIFVNIFQALEEMNTDLIEMAHAYSTPSFKILKEIYLPA 170

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
            +P LV  + ++ +  W   V +E I
Sbjct: 171 LLPALVSALSIAFAFAWKSSVFAEFI 196


>gi|220924746|ref|YP_002500048.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949353|gb|ACL59745.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 281

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 40/233 (17%)

Query: 62  PQYASRTTLRMLSAMVISLLF---------TFVYATLAAK--------SRRLGMVLVPIL 104
           PQ  +    +ML+A  ++L F          F+Y + AA         SRR+     P  
Sbjct: 65  PQLVAAAFWKMLTAQNLALDFLASISIVGQAFLYGSAAAILLGIAAGLSRRVEEFFGPTF 124

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           D ++ IP + +L   V++     P KV+    +  F +F         +  Q + N+ ++
Sbjct: 125 DTIRHIPGIAWLPLIVLWLGIGAPAKVLVIAKSVFFPVF--------LNTLQGIRNVDKN 176

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             E++R+  L+ WQ    + +P ++P ++ ++  +    W       ++VV + +  L G
Sbjct: 177 HVELARALTLTRWQLVRRVVLPSALPSILVSLRYAAGLAW------ALVVVAEGLSGLEG 230

Query: 225 IGSYIALAIKEQDLLAILYAMLTM--LGVI-FLYDQ---LLFRPMIVWSNKFR 271
           +G  I    + Q LL     M+ M  +G++ F  D+   L+ R ++ W   F 
Sbjct: 231 LGFLI---FRAQGLLLTDQLMVCMVVIGLVGFAIDRGMALVQRRLLRWKQGFE 280


>gi|296156098|ref|ZP_06838937.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295893604|gb|EFG73383.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 323

 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  V            E A +     ++   ++++PGI P          
Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKFKLLTHVVIPGILPDLYRDQRILL 254

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI +      F  V   ++++    L  +
Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYEHFENVYAAIMMIGIIGLGTD 304


>gi|161523068|ref|YP_001585997.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189348106|ref|YP_001941302.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160346621|gb|ABX19705.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189338244|dbj|BAG47312.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 292

 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/142 (19%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    + +L  FV  ++A  +R    +L  +  +   +P +  L   +++F  L  G +
Sbjct: 99  LLRGYALGVLLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGSL 157

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +       F +  + +W +  +MY     +P  L    R++ L+G ++   + VP ++P 
Sbjct: 158 L-------FVLVHAVLWPLAVNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPS 210

Query: 192 LVWNMMMSMSGGWFFVVASEMI 213
           ++  + +  +  W  ++A+E++
Sbjct: 211 ILSGLRVGWAFAWRTLIAAELV 232


>gi|307130327|ref|YP_003882343.1| Taurine transport system permease tauC [Dickeya dadantii 3937]
 gi|306527856|gb|ADM97786.1| Taurine transport system permease protein tauC [Dickeya dadantii
           3937]
          Length = 288

 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LPQ  + +   +L   VI  +   + +TLA  S +LG  L+ +L  M +      L   
Sbjct: 83  ELPQKTAVSLGTLLKGYVIGSVLALLLSTLAV-SVQLGRDLLALLTAMLNPLPAIALLPL 141

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + +  L        E + +F +  S +W M  + Y     +   L    R++ L+GW+ 
Sbjct: 142 ALLWFGL-------GEKSLVFVLVHSVMWPMALNAYSGFLGVSDTLRMAGRNYGLTGWRY 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              + +P ++P ++  + +  +  W  ++A+E++
Sbjct: 195 VARILIPAALPAIISGLKIGWAFAWRTLIAAELV 228


>gi|46445649|ref|YP_007014.1| putative integral membrane components of the ABC transporters
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46399290|emb|CAF22739.1| putative integral membrane components of the ABC transporters
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 258

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 26/135 (19%), Positives = 67/135 (49%), Gaps = 3/135 (2%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A  F +    +W++  +    + N+P      +R+    G+  ++ + VP ++P ++ 
Sbjct: 119 EKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALPFIIS 178

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M    +  W  ++A+E+ +   T++   G+G+ +    +   + A++  M  ++ V  L
Sbjct: 179 GMKQGWAFAWRSLMAAEIYI---TILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLL 235

Query: 255 YDQLLFRPMIVWSNK 269
            D+++F P+ V+ ++
Sbjct: 236 VDKVVFSPLEVFMHE 250



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 14/208 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ R++   ++  ++ IP+G+           I   A  L   P+  + PL +     +
Sbjct: 59  VTLKRLIQGYLVGLLVGIPIGLLNARFQLFEDTIGFLALGLQTLPSVCWAPLAI----LW 114

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  ++I G+ W I     AG    P  +   A +    G+  W  +I+P   P
Sbjct: 115 FGQTEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563
           + ++G       AW + + +E+    +I + T  GLG  +    E  +   V+  + ++ 
Sbjct: 175 FIISGMKQGWAFAWRSLMAAEI----YITILTGFGLGNLLHYGRELHAMDAVIGVMFVII 230

Query: 564 CFVLALNRFLWHPLYLY-----GTRCLR 586
              L +++ ++ PL ++     GT   R
Sbjct: 231 AVGLLVDKVVFSPLEVFMHEKWGTHTKR 258


>gi|327481588|gb|AEA84898.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 301

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 16/156 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           VHSL     R  L    A+V+ +L       L  +SR    +L+P +++ + IP + ++ 
Sbjct: 105 VHSL----ERIALAYAYAVVLGVLC----GVLIGRSRWAEDILLPYIELFRPIPAVAWIP 156

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             + + +F  F    + +  +    +   P  L   +RS   S  
Sbjct: 157 LAILMLPT--------EQSSIVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDR 208

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              W++ +P +MP +V  + + M   WF ++A E+I
Sbjct: 209 AILWHVVIPGAMPSIVAGLAIGMGVAWFSLLAGEII 244



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +    A ++ +  G+ IG        + P+ +L    PA  + PL +  +    
Sbjct: 107 SLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAILMLPTEQ 166

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +   G  + I+ N + G    P+     A S   +      ++++PG  P 
Sbjct: 167 SS----IVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILWHVVIPGAMPS 222

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            V G     G AW + +  E+ S  +      G+G +   S     +PE+++G+L
Sbjct: 223 IVAGLAIGMGVAWFSLLAGEIISGQY------GIGYFTWTSYTLVKYPEIIIGML 271


>gi|313890137|ref|ZP_07823772.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121498|gb|EFR44602.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 311

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 6/167 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116
           +LP  +    + +LSA+V +         +   S + G  L+ P ++++  IP  + GF+
Sbjct: 84  ALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              V+  +   L+ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVIVPFIRTLFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMP 249


>gi|302340533|ref|YP_003805739.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637718|gb|ADK83145.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 240

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 24/215 (11%)

Query: 24  AFVLVIG---IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           A VLVIG   I++ +   +   T+P   V IV I      L Q    +  R+++A+ +  
Sbjct: 11  ALVLVIGVWGILSFIYPPLVIPTIPSVCVKIVEIMTHADML-QIILVSFTRLITALTVGT 69

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAI 139
           +  F    L  K      +  P++ ++Q IP +  L   +++F  N  P   I +   AI
Sbjct: 70  IAGFAIGILCGKFTVFREITGPLIGVLQVIPPVALLILAILWFGFNGKPAIFIAS--MAI 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F I       M  S+   + NI     E+  +FRL+    F  + +P   P        S
Sbjct: 128 FPI-------MVISVQHGIMNIDPKTLEMGETFRLTKRSMFLDIIIPSIRP--------S 172

Query: 200 MSGGWFFV--VASEMIVVGDTVIPLPGIGSYIALA 232
           ++ GW     +A + +V+G+ +    GIG  ++ A
Sbjct: 173 LTSGWRISLGLACKTMVMGEVLTTPTGIGGALSQA 207


>gi|307727967|ref|YP_003911180.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307588492|gb|ADN61889.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 279

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R     +I   + + +GI  GF P   + +    Q++ A P     PLV+      
Sbjct: 81  VSLLRAASGFVIGGTLGLALGIVAGFSPLAQALLDRSIQMVRAVPFLAMLPLVIVWFGVG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                ++L +L +F   + I  N + G         E+A    +      R I+LPG  P
Sbjct: 141 E-TAKIFLVVLAVF---FPIYINTMLGIRQLDPKLLELARVVGLERTAIVRRIVLPGAMP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557
             +TG   A   AW A +++E  +       T G+G    ++ E  +   +VL       
Sbjct: 197 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLNTNVIVLTVIVYAI 250

Query: 558 -GVLIMCCFVLALNRFL-WHPLYLYGT 582
            GV+      L   RFL WH  Y  G 
Sbjct: 251 IGVVADALVRLLEARFLSWHANYAKGA 277


>gi|167587279|ref|ZP_02379667.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia ubonensis Bu]
          Length = 269

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 165 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  L R    WHP Y  G + 
Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKVADVLAKWLERATLRWHPAYQPGAQT 269


>gi|145598908|ref|YP_001162984.1| glycine betaine transporter membrane protein [Yersinia pestis
           Pestoides F]
 gi|145210604|gb|ABP40011.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Pestoides F]
          Length = 384

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 199 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 253

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 254 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 306

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 307 VVIASMIAVG-------GLGQMVLRGIGRLDM 331


>gi|152996716|ref|YP_001341551.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150837640|gb|ABR71616.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 263

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S  +  VL P L ++QS P++      +V      P +V+   L   F +  S    M 
Sbjct: 94  RSELMNRVLYPALIVIQSTPVVAVAPLIIVLLGTDDPSRVLITCLITFFPLVVSTTTGM- 152

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
                     P ++ E+S+S R   +++ W + +P+++P +   + +S++      V +E
Sbjct: 153 -------LETPPEMIELSQSLRAPRYRETWQIRIPYAIPHIFSGLRVSITLAIIGAVVAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALA 232
            +   +      G+G +I  +
Sbjct: 206 FVAAEE------GLGYFIQFS 220


>gi|162419458|ref|YP_001607863.1| glycine betaine transporter membrane protein [Yersinia pestis
           Angola]
 gi|162352273|gb|ABX86221.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis Angola]
          Length = 388

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 203 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 257

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 258 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 310

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 311 VVIASMIAVG-------GLGQMVLRGIGRLDM 335


>gi|302132199|ref|ZP_07258189.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 285

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A++  IPVGI IG          P  + 
Sbjct: 73  GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +  L L  L IF     I      G           A 
Sbjct: 132 SRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267


>gi|296133748|ref|YP_003640995.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296032326|gb|ADG83094.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 233

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 14/190 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+++   ISL+          + R L   L P+L  +Q++P + +L   +++F       
Sbjct: 42  RVITGYFISLVIGLTLGLTVVRVRYLDENLSPLLLGLQTLPSICWLPLAILWFG------ 95

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E + IF I    +++++ +    + N+P     V+++    G + +  + +P ++P
Sbjct: 96  -IG-EDSIIFVIAIGSIFSISMAAVSGIKNVPPLYMRVAKTMGAKGLKAYTTVVIPAALP 153

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M    S  W  ++A EM+       P  G+G  + +     D+  ++  M+ ++ 
Sbjct: 154 SIISGMKQGWSFAWRALMAGEMLS------PKDGLGYALTVGRDLADMNQVVSVMIIIIV 207

Query: 251 VIFLYDQLLF 260
           +  + D+L+F
Sbjct: 208 LGLVIDKLIF 217


>gi|260769331|ref|ZP_05878264.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
 gi|260614669|gb|EEX39855.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
          Length = 266

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+P+L   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPLLIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPATLPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W NK
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KTAIPWENK 266


>gi|229593055|ref|YP_002875174.1| putative glycine betaine/L-proline ABC transporter membrane protein
           [Pseudomonas fluorescens SBW25]
 gi|229364921|emb|CAY53014.1| putative glycine betaine/L-proline ABC transport system, membrane
           protein [Pseudomonas fluorescens SBW25]
          Length = 281

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|220913559|ref|YP_002488868.1| binding-protein-dependent transporters inner membrane component
           [Arthrobacter chlorophenolicus A6]
 gi|219860437|gb|ACL40779.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 320

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 22/225 (9%)

Query: 50  DIVPITLDV---------HSLPQYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           D+VP  LDV             Q A  T+L R L   +IS+        L A+   L   
Sbjct: 91  DLVPGPLDVVGQMGVLWGEGKLQEAMWTSLQRGLVGFLISVAIATPVGLLLAQVAPLRRA 150

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
             P++  +Q +P + ++   +++F         G   A + F +F   + ++   +   +
Sbjct: 151 FGPLISGLQVLPSVAWVPAAIIWF---------GLTDATVYFVVFMGAIPSIINGLISGV 201

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             IP     V      +  Q    + +P ++PG +  +    +  W  ++A+E+I VG T
Sbjct: 202 DQIPPQFRRVGTVLGANRLQMALQVVLPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGT 261

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +    G+GS +       D+  ++ A+L +LGV  L + L+F P+
Sbjct: 262 IG--FGLGSLLDQGRALSDMTVVMSAILLILGVGILIELLVFAPI 304


>gi|163737049|ref|ZP_02144467.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis
           BS107]
 gi|161389653|gb|EDQ14004.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis
           BS107]
          Length = 283

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 18/156 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158
           LVP++  +  IP +  L   V++F         G + A+ +A+     +  T  + Y ++
Sbjct: 126 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 176

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+     
Sbjct: 177 DNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAEH- 235

Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGVI 252
                GIG+YI  A    DL  +    A+L++LGV+
Sbjct: 236 -----GIGAYILEAGSLYDLERLFAGVAILSVLGVL 266


>gi|149188568|ref|ZP_01866860.1| putative permease [Vibrio shilonii AK1]
 gi|148837478|gb|EDL54423.1| putative permease [Vibrio shilonii AK1]
          Length = 297

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
            T+R +S +++S   TFV   L        A+S++   V+ PILDIMQ++P   +L   V
Sbjct: 102 NTMRTMSIILVS---TFVAIALGIPTGIIMAQSKKARAVITPILDIMQTMPAFVYLIPVV 158

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              M L  GK+ G     I+AI    V  +T      +  + +++ E + ++  S  Q+ 
Sbjct: 159 ---MLLGIGKIPGVIAVVIYAI--PPVIRLT---DLGIRLVDKEVLEAATAYGASPMQRL 210

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + VP +MP ++  +  ++      VV + MI V        G+G  +  +I  Q    
Sbjct: 211 FGVQVPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTL 263

Query: 241 ILYAMLTMLGVIFLYDQL 258
            L   L ++ +  ++D++
Sbjct: 264 GLLNGLAIVALAIIFDRV 281


>gi|41407207|ref|NP_960043.1| hypothetical protein MAP1109 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118464707|ref|YP_882581.1| ABC transporter permease [Mycobacterium avium 104]
 gi|41395558|gb|AAS03426.1| hypothetical protein MAP_1109 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118165994|gb|ABK66891.1| ABC transporter permease protein [Mycobacterium avium 104]
          Length = 286

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +++ LR+L+   ++ +       L  +SR    V  P+ ++ + IP +  +   ++ F  
Sbjct: 88  AQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMVPVAILLFPT 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G V    LAA F I          S   ++  +P   E+  R+     WQ    + +
Sbjct: 148 DEAGIVFITFLAAYFPIM--------VSTRHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 199

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P  +PG+   + + M   W  V+++EMI
Sbjct: 200 PGILPGVFGGLSVGMGVAWICVISAEMI 227


>gi|1074368|pir||F64149 nitrate transport protein nrtB homolog HI0355 - Haemophilus
           influenzae (strain Rd KW20)
          Length = 260

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 89  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 146

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 147 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 197

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 198 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 253

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 254 HR--FIWS 259


>gi|22125122|ref|NP_668545.1| glycine betaine transporter membrane protein [Yersinia pestis KIM
           10]
 gi|45442233|ref|NP_993772.1| glycine betaine transporter membrane protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597275|ref|YP_071466.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808368|ref|YP_652284.1| glycine betaine transporter membrane protein [Yersinia pestis
           Antiqua]
 gi|108811295|ref|YP_647062.1| glycine betaine transporter membrane protein [Yersinia pestis
           Nepal516]
 gi|149365459|ref|ZP_01887494.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CA88-4125]
 gi|153949330|ref|YP_001400041.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|165925220|ref|ZP_02221052.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165939926|ref|ZP_02228464.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008318|ref|ZP_02229216.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212363|ref|ZP_02238398.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398795|ref|ZP_02304319.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421456|ref|ZP_02313209.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423494|ref|ZP_02315247.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468718|ref|ZP_02333422.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis FV-1]
 gi|170023360|ref|YP_001719865.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186896379|ref|YP_001873491.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929723|ref|YP_002347598.1| glycine betaine transporter membrane protein [Yersinia pestis CO92]
 gi|229838199|ref|ZP_04458358.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895455|ref|ZP_04510627.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229898689|ref|ZP_04513834.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901540|ref|ZP_04516662.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270489727|ref|ZP_06206801.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504445|ref|YP_003568507.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Z176003]
 gi|21957980|gb|AAM84796.1|AE013725_9 permease of high-affinity ABC transport system for glycine betaine
           and proline [Yersinia pestis KIM 10]
 gi|45437097|gb|AAS62649.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51590557|emb|CAH22198.1| ABC glycine/betaine/L-proline transporter, permease subunit proW
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774943|gb|ABG17462.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Nepal516]
 gi|108780281|gb|ABG14339.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Antiqua]
 gi|115348334|emb|CAL21267.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CO92]
 gi|149291872|gb|EDM41946.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CA88-4125]
 gi|152960825|gb|ABS48286.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|165912145|gb|EDR30784.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922827|gb|EDR39978.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992700|gb|EDR45001.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206294|gb|EDR50774.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960945|gb|EDR56966.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051299|gb|EDR62707.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057664|gb|EDR67410.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169749894|gb|ACA67412.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186699405|gb|ACC90034.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229681469|gb|EEO77563.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688237|gb|EEO80308.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694565|gb|EEO84612.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701610|gb|EEO89637.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262362564|gb|ACY59285.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis D106004]
 gi|262366431|gb|ACY62988.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis D182038]
 gi|270338231|gb|EFA49008.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354904|gb|ADE65245.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Z176003]
 gi|320016145|gb|ADV99716.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 388

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 203 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 257

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 258 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 310

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 311 VVIASMIAVG-------GLGQMVLRGIGRLDM 335


>gi|237802385|ref|ZP_04590846.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025242|gb|EGI05298.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 281

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P++MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273


>gi|298529248|ref|ZP_07016651.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510684|gb|EFI34587.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 29/165 (17%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY---QSL 158
           PILD MQ++P   +L   + +F            L  + AIF + V++M  ++      +
Sbjct: 129 PILDFMQTLPAFVYLIPAIPFF-----------GLGKVAAIFATVVFSMPPAIRFTNLGI 177

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIV 214
             +P++L E + +F    WQK + + +P +    M G+   +M+++S     VV + MI 
Sbjct: 178 RQVPKELTECADAFGADRWQKLFKIQLPLAKTTIMGGVNQTVMLALS----MVVIAAMIG 233

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G       G+G  +  AI+     A   A + ++ +  + D+LL
Sbjct: 234 AG-------GLGGEVWRAIQRLQPGAGFEAGIGIVILAIILDRLL 271


>gi|218676848|ref|YP_002395667.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
 gi|218325116|emb|CAV26975.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 283

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 125 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 174

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   Y+ +P ++P L   + +++      V+A    VVG+
Sbjct: 175 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 228

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W N+
Sbjct: 229 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFVTDKLL-KKAIPWENQ 283


>gi|145631810|ref|ZP_01787569.1| ABC transporter permease protein [Haemophilus influenzae R3021]
 gi|144982529|gb|EDJ90083.1| ABC transporter permease protein [Haemophilus influenzae R3021]
          Length = 245

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISSVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238

Query: 260 FRPMIVWS 267
            R   +WS
Sbjct: 239 HR--FIWS 244


>gi|133930593|gb|ABO43867.1| permease protein [Lactobacillus reuteri]
          Length = 207

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420
           +G I+ +F      Y  ++G   +  VV L+I + II +P+G       +I S+I+P   
Sbjct: 2   LGQIIQYFQTNSGQYWQYVGQHIILTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 53

Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
               FAQLL   P+     L++  +    +   + L +L +      +L N I G +   
Sbjct: 54  FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 109

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535
             +KEV  +  +   R  R I +P   PY + G  +       +A++ + + + G   L 
Sbjct: 110 PLYKEVGIALGMDQRRLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 169

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            TGLG Y       G+    +L +L M  F
Sbjct: 170 FTGLGLYDMSYVVIGAVSVAILSLLAMISF 199


>gi|312883011|ref|ZP_07742742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369171|gb|EFP96692.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 299

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 29/179 (16%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  L + +         A+S R+  V+ P+LD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTLLSIILGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      + +++ E + +F  S  Q+  
Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLI 211

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|269794999|ref|YP_003314454.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097184|gb|ACZ21620.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 322

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 11/192 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           LG  T+ RV+    +A+++ IP+G+ +G        + P   L    P   + PL +  +
Sbjct: 127 LGASTV-RVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPLTLLII 185

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            Y      ++L  L  F   + IL N I+G    P    E AS       +    +ILP 
Sbjct: 186 GYGD-GSAIFLVFLAAF---FPILLNTISGVRQVPVRLVEAASMLGTRSGQVLYKVILPA 241

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                V G   A G +W   +V E          +TGLGA I ++ +      +V G+++
Sbjct: 242 SMRSIVGGLRIALGLSWVILVVGETVGI------STGLGAMITQARDMSKTDLIVAGMVV 295

Query: 562 MCCFVLALNRFL 573
           +       +R L
Sbjct: 296 IGLAGFVADRLL 307


>gi|298368917|ref|ZP_06980235.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298282920|gb|EFI24407.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 515

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + TL  L   +I+LL     A  LA   A  RR    ++ + +I+Q+IP L  L   + +
Sbjct: 14  QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLIPF 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P  +I   L A+  IF +         Y  L  I   ++E   +F LS WQ  W 
Sbjct: 74  VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125

Query: 183 LGVPFSMPGLV 193
           + +P ++P ++
Sbjct: 126 IELPMALPAMI 136


>gi|317154718|ref|YP_004122766.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944969|gb|ADU64020.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 275

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 27/194 (13%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S TTL M LS++V   +        A +S R    L P+LD MQ+ P   +L   V+ F 
Sbjct: 90  SMTTLAMVLSSVVFCFVVGIPLGIAAGRSDRFESALRPVLDAMQTTPAFVYLVPIVMLF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     IFA+    +  +T      +  +  +L E +++F  +  Q    + 
Sbjct: 149 --SVGNVAGVLATIIFAL--PPIIRLT---SLGIRGVHPELIEAAQAFGATRTQVLLRVQ 201

Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           VP +MP    GL   +MM++S     VV + +I  G       G+GS + L +   D   
Sbjct: 202 VPLAMPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVVLGLNTLD--- 247

Query: 241 ILYAMLTMLGVIFL 254
           I  A++  LG++ +
Sbjct: 248 IGRAVIGGLGIVLM 261


>gi|217960227|ref|YP_002338787.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH187]
 gi|217064216|gb|ACJ78466.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH187]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|30262757|ref|NP_845134.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47528078|ref|YP_019427.1| glycine betaine/L-proline ABC transporter permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185603|ref|YP_028855.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           anthracis str. Sterne]
 gi|52142725|ref|YP_084104.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus E33L]
 gi|65320082|ref|ZP_00393041.1| COG4176: ABC-type proline/glycine betaine transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165868422|ref|ZP_02213082.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167637784|ref|ZP_02396063.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170685429|ref|ZP_02876653.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|170704600|ref|ZP_02895066.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|177649738|ref|ZP_02932740.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190565236|ref|ZP_03018156.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196043421|ref|ZP_03110659.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|218903908|ref|YP_002451742.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|225864762|ref|YP_002750140.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|227814403|ref|YP_002814412.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229601264|ref|YP_002867064.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|254685349|ref|ZP_05149209.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722757|ref|ZP_05184545.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. A1055]
 gi|254737805|ref|ZP_05195508.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Western North America USA6153]
 gi|254752119|ref|ZP_05204156.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Vollum]
 gi|254760640|ref|ZP_05212664.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Australia 94]
 gi|300118748|ref|ZP_07056474.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus SJ1]
 gi|301054307|ref|YP_003792518.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           anthracis CI]
 gi|30257389|gb|AAP26620.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47503226|gb|AAT31902.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179530|gb|AAT54906.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Sterne]
 gi|51976194|gb|AAU17744.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus E33L]
 gi|164715148|gb|EDR20665.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167514333|gb|EDR89700.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170130401|gb|EDS99262.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|170670789|gb|EDT21528.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|172084812|gb|EDT69870.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190563263|gb|EDV17228.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196025730|gb|EDX64399.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|218538402|gb|ACK90800.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|225786094|gb|ACO26311.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|227004898|gb|ACP14641.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229265672|gb|ACQ47309.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|298723905|gb|EFI64621.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus SJ1]
 gi|300376476|gb|ADK05380.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus biovar anthracis str. CI]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|167031249|ref|YP_001666480.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857737|gb|ABY96144.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 534

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 16/207 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           T P +++  + + L   SLPQ    +  R L+ +++      +   +   SR    +  P
Sbjct: 318 TSPLEVLRTLLVGLADGSLPQALLLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFGP 377

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  ++ + +  ++     +F      K +   LAA F +          +  + +  + 
Sbjct: 378 SLTALRQVALFAWVPLLTAWFGLGEGAKHVFVGLAAFFPLL--------IATQRGIAGLS 429

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E +R+ RL  WQ+   L +P + PG+   + +S+   W   + +E          +
Sbjct: 430 PQLGEAARTLRLGLWQRLRLLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYF--------M 481

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTML 249
           P  G   +L I  Q L  +   M  ML
Sbjct: 482 PSDGGIASLMIGAQQLFRMDQVMAAML 508


>gi|315178683|gb|ADT85597.1| hypothetical permease of ABC transporter [Vibrio furnissii NCTC
           11218]
          Length = 280

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    +  V+ PILD+MQ++P   +L  T+V 
Sbjct: 89  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P  L E  ++F  S  +  +
Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEALIEAGKAFGASNMKLLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 200 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 252

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 253 FEAGLAIVLVAIILDRLCKAP 273


>gi|86359445|ref|YP_471337.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CFN 42]
 gi|86283547|gb|ABC92610.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 268

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 23/183 (12%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            I + F P +   + P        P     PLVV    +  L P + L  L+ F   + +
Sbjct: 92  SILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGF-GLLPKILLVALVTF---FPL 147

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L  ++ G  A   D  E+ +S   + WR +R    P   PY+  G   +   A   +I +
Sbjct: 148 LVALLQGYEATDRDIAELLNSMKASRWRIFRLARFPSSLPYFFAGLRISITYAVVGAIFA 207

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSF-PEVVLGVLI------MCCFVLAL--NRFL-- 573
           E A         +GLG YI  +  K +F P++VL  +I      +C F L L   RF+  
Sbjct: 208 EYAG------AASGLGIYILNA--KNNFRPDLVLAAVIVSALLTLCLFALTLVIQRFVMP 259

Query: 574 WHP 576
           W P
Sbjct: 260 WQP 262


>gi|17549727|ref|NP_523067.1| transmembranee ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17431982|emb|CAD18659.1| probable transmembranee abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 298

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +  N  AG  +  N  + V  ++ ++G  +   I++P  FP  +TG       AW   
Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTL 232

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           I SE+     +     GLG YI E+      PEV  G+L +    L +   ++  L
Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 17/173 (9%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG   +  L  M   +P +  L   +V+F  L  G +I       F I  S VW ++ +
Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVSLN 178

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +    ++   L  V R++ LSG      + +P + P ++  + +  +  W  ++ASE++
Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTLIASELV 238

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263
                     G+G YI    + ++LL I      +LT++ +  L + L+FR +
Sbjct: 239 F--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286


>gi|325110139|ref|YP_004271207.1| substrate-binding region of ABC-type glycine betaine transporter
           [Planctomyces brasiliensis DSM 5305]
 gi|324970407|gb|ADY61185.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Planctomyces brasiliensis DSM 5305]
          Length = 502

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA----TLAAKSRRLGMVLVPILDIMQSI 110
           T +  +L    + TT + L  + ISLL   V A     ++A++R  G +++   +I+Q+I
Sbjct: 287 TRETSTLSSRLATTTAQHLWLVSISLLAAIVVAIPAGVISARNRLAGQLILGFTEIVQTI 346

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F+++  G  + +    I A+F   +  +  +    L  IP  L+E + 
Sbjct: 347 PGLALLVLIGILFVHV--GLPMVSPWPVIVALFLYSLLPIVRNTLAGLDGIPTSLQESAA 404

Query: 171 SFRLSGWQKFWYLGVPFSMP 190
              L+ W + W + +P + P
Sbjct: 405 VLGLTEWNRLWRIELPLASP 424


>gi|260553009|ref|ZP_05825924.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624]
 gi|260405251|gb|EEW98748.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624]
          Length = 265

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + +
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W      
Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R ++
Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLL 257

Query: 265 VWSNKFR 271
            W   ++
Sbjct: 258 RWHAGYQ 264



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         VLA  L R+L  WH  Y
Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHAGY 263


>gi|119952261|ref|YP_950117.1| putative ABC transporter [Arthrobacter aurescens TC1]
 gi|119951391|gb|ABM10301.1| putative ABC transporter [Arthrobacter aurescens TC1]
          Length = 257

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P  +   A P  V  P+++  +    +   + ++++ I G  W +L N I G  A    
Sbjct: 92  EPVLEFFRAIPPPVLVPVLMLLMG---ITDGMKVAVI-ISGCVWPVLLNTIEGVRAIDGV 147

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A ++ I GW   +Y++LP   P  + G            ++SE+ +       ++G
Sbjct: 148 LSDSAHTYGIHGWARIKYLVLPSAGPQIMAGIRQCLSIGLILMVISEMFA------SSSG 201

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           LG  I +     + PE+  G++++    +AL+
Sbjct: 202 LGFTIVQFQRSFAIPEMWSGIVVLGLIGVALS 233


>gi|330821336|ref|YP_004350198.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327373331|gb|AEA64686.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 238

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  ++P L  L   +  F        IG ++ AI A+F + +  +T + Y+ + N+P
Sbjct: 82  VFNIGNTVPSLAVLAIALGIFG-------IG-DMPAIVALFLASLLPITRNAYEGMRNVP 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             L E +R   ++ WQ    + +P ++P +V  +  +++
Sbjct: 134 ASLREAARGIGMTPWQSLTRVELPNALPIIVGGVRTALA 172


>gi|296161510|ref|ZP_06844316.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295888325|gb|EFG68137.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 275

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L ++++IP +  +   VV+F        IG EL+ +  I  + +  M  S Y ++  I 
Sbjct: 118 VLQMLRTIPFIALVPIFVVWFG-------IG-ELSKVALIVGAAISPMYLSTYHAIRGID 169

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             L E+ R+FRL+   +   + +P ++PG++  +  S +     +VA+E I
Sbjct: 170 PKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQI 220


>gi|320527072|ref|ZP_08028261.1| ABC transporter, permease protein [Solobacterium moorei F0204]
 gi|320132657|gb|EFW25198.1| ABC transporter, permease protein [Solobacterium moorei F0204]
          Length = 256

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 415 SSKIQPFAQLLA-------AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           ++K   F QLLA       + P   F  LV+  V    L+  + +S LM+F   +    N
Sbjct: 85  AAKYNWFKQLLAPLVFTVKSIPVASFIILVLIWVHSAQLS--IVISFLMVFPIFYE---N 139

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           V  G   + +   E+A  F ++ +   RYI    I PY+ +    A G AW + I +EV
Sbjct: 140 VRKGIEMYNHQLLEMADVFELSNFARIRYIYTSSILPYFQSACSLALGLAWKSGIAAEV 198


>gi|167632060|ref|ZP_02390387.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|254743021|ref|ZP_05200706.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Kruger B]
 gi|167532358|gb|EDR94994.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|88807960|ref|ZP_01123471.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 7805]
 gi|88787999|gb|EAR19155.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 7805]
          Length = 298

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 22/149 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A +++L+       L+A+ R +  ++ P LD+MQ++P   +L   V+ F        
Sbjct: 101 VITASLLALVIGLPLGILSARYRSVWRLVRPCLDLMQTMPAFVYLIPAVMLFST------ 154

Query: 132 IGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 A+ +I  + +++M     + Q  L  +P DL E  RSF  S  Q  W + +P +
Sbjct: 155 -----GAVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSA 209

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMI 213
           +P    G+   +M+++S     VV + MI
Sbjct: 210 LPTVMTGVNQTIMLALS----MVVIASMI 234


>gi|126640140|ref|YP_001083124.1| alkanesulfonate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 178

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 19/184 (10%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+  G     S+ +    Q++   PA    PLV+    ++ ++    L L+ + G  + 
Sbjct: 3   LGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFP 58

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  N   G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV
Sbjct: 59  IYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIV 118

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--W 574
           +E  S         G+G     + E      V++G+L+         VLA  L R+L  W
Sbjct: 119 AETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRW 172

Query: 575 HPLY 578
           H  Y
Sbjct: 173 HAGY 176



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 88/189 (46%), Gaps = 23/189 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   SR    +L   L ++++IP L  +   +++F           E A +F +     +
Sbjct: 6   LNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFF 57

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W    
Sbjct: 58  PIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV--- 114

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRP 262
              +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R 
Sbjct: 115 ---LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERY 168

Query: 263 MIVWSNKFR 271
           ++ W   ++
Sbjct: 169 LLRWHAGYQ 177


>gi|77461633|ref|YP_351140.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77385636|gb|ABA77149.1| putative aliphatic sulfonates ABC transport system, permease
           protein [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 15/132 (11%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 97  VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 148

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  FW + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 149 ALVEMARSYGLSGFSLFWQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 202

Query: 224 GIGSYIALAIKE 235
           GIG Y+A+  +E
Sbjct: 203 GIG-YLAMNARE 213


>gi|325290913|ref|YP_004267094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966314|gb|ADY57093.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 256

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
            I++ RV V  ++ + + +P+G I  G  P +S  ++P    L++ P  + FP+ V    
Sbjct: 62  AISLKRVFVGFLLGTFLSLPLGFILAGALPWLSRFLRPLTVFLSSIPPFILFPIFVIISG 121

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                    +  ++ + + W ILF  I G           A S + +  + +  ++LPG 
Sbjct: 122 IGEGG----IYTVIFWSSFWPILFTTIVGIENVDPLLVRAAKSMNASKLQIFYKVVLPGA 177

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TG  T    ++   I +E  S G      +GLG  I  +   G    + LG +++
Sbjct: 178 SPTIITGVRTGLTMSFFMLIGAE--SMGA----DSGLGWVIHNAQNMGFVERIYLGAILV 231

Query: 563 CCFVLALN 570
               L LN
Sbjct: 232 AGVGLLLN 239


>gi|308186889|ref|YP_003931020.1| ABC transport system, permease component [Pantoea vagans C9-1]
 gi|308057399|gb|ADO09571.1| Putative ABC transport system, permease component [Pantoea vagans
           C9-1]
          Length = 215

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + PILG  T      T+  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPILGIATVVLTIPTIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            N+P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|304395966|ref|ZP_07377848.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304356335|gb|EFM20700.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 215

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + PILG  T      T+  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPILGIATVVLTIPTIALFGLMIPVFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            N+P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|229551749|ref|ZP_04440474.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229314880|gb|EEN80853.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 308

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 6/170 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113
           +V +LP       +  LSA+V +         +   S + G  VL P+++++  IP  + 
Sbjct: 80  EVGALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVY 139

Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +
Sbjct: 140 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 198

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  + + +  ++PG++  ++  M+  +   +A +M++    ++P
Sbjct: 199 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 248


>gi|206579848|ref|YP_002240248.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|290509981|ref|ZP_06549351.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|206568906|gb|ACI10682.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|289776697|gb|EFD84695.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 247

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV V + +A I+ IP G+ +G          P  Q L       + P+ V  +  
Sbjct: 59  AISLSRVAVGLGLALIVGIPCGLLMGCSAASERLAMPALQFLRMISPLSWMPVAVMLLGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  +W   L+ F   W +L N  +G    P  +  +A S   T      +IILPG+ 
Sbjct: 119 G--DRPIWF--LLSFAAVWPVLLNTASGVRQLPPGWLLLARSLSATRRETLWHIILPGVR 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            + +TG   A G  W   +  E+         ++GLG  I ++ ++
Sbjct: 175 AHILTGVRLAIGILWIVLVPCEMLG------VSSGLGYAILDARDR 214


>gi|153008918|ref|YP_001370133.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151560806|gb|ABS14304.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA    L   + P+LD+MQ++P   +L   +V+F + + PG      LA    +  + V 
Sbjct: 118 AAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATAIFVLPAPV- 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   +  + + P  L E   +F  S  Q  W + +P++MP    GL   +M+S+S
Sbjct: 172 RLT---HLGISSTPSSLIEAGEAFGASRSQLLWKIELPYAMPQILAGLTQTIMLSLS 225


>gi|78355721|ref|YP_387170.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218126|gb|ABB37475.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 279

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 23/194 (11%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A ++++L        AA ++     ++P+LD+MQ++P   +L   + +F        
Sbjct: 97  VLVATLLAVLIGLPLGVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFF-------- 148

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLC----NIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               L  + AIF++ V+ M   + +  C     +P +L E + +F  + WQ+   L +P 
Sbjct: 149 ---GLGKVAAIFSTVVFAMP-PVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPL 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  +  ++      ++A  M+V+   +I   G+G  +  AI+  ++     A + 
Sbjct: 205 AAPTIMAGVNQTV------MLALSMVVIA-AMIGAKGLGGEVWKAIQRLEMGRGFEAGIG 257

Query: 248 MLGVIFLYDQLLFR 261
           ++ V    D+LL +
Sbjct: 258 IVIVAICLDRLLQK 271


>gi|308067985|ref|YP_003869590.1| glycine/betaine-binding protein precursor [Paenibacillus polymyxa
           E681]
 gi|305857264|gb|ADM69052.1| Glycine betaine-binding protein precursor [Paenibacillus polymyxa
           E681]
          Length = 618

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 30/234 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI-FTSQVW 148
           A S+    ++ P+LD MQ++P   +L   V +F + + PG +     + IFAI  T ++ 
Sbjct: 114 AYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVI----ASVIFAIPPTIRMT 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
           N+       +  +  +L E S +F  +  QK + + +P ++P    G+   +M+S+S   
Sbjct: 170 NL------GIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLS--- 220

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
                  M+V+  ++I   GIG+ +  A+ +  +     A L ++ +  + D   Q LF+
Sbjct: 221 -------MVVIA-SMIGAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNLFK 272

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           P      +   ++   I  A + V+ +   + +     +S+    +  +N V +
Sbjct: 273 PTQKGKGRVSSKQKVWITSAVTAVILIAGASQYFVGTDHSASGKGNAAANPVGE 326


>gi|303246777|ref|ZP_07333054.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302491794|gb|EFL51674.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 254

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL   + GA A P  F+  A+++ ++ +     ++LP   P    G  TA   A   +++
Sbjct: 131 ILVGAMDGARAVPPQFRLTAAAYGLSRFDTLARVMLPAAGPSVAAGFRTAVPMALIVAVL 190

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           SE+         T+G+G YI       + PE+  GV ++    L LN
Sbjct: 191 SEMIGA------TSGIGHYILRMQRTFAIPEMYAGVAMLGILGLGLN 231


>gi|298247631|ref|ZP_06971436.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297550290|gb|EFH84156.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 290

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 107 MQSIPILGFLTFTVVYFMNLYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +Q+IP +  L    V F++L      K++G     I    T  +   T+ +   L NIP 
Sbjct: 118 LQAIPSIMLLLPLFVLFISLQSFLQVKLVGTYTGVIITYLTFSLPFATWLLVTYLANIPL 177

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           D+EE +     +  Q  W + VP ++PGLV  ++ S   GW  V+ + ++   +T
Sbjct: 178 DVEEAAMIDGATRLQTLWRIIVPLALPGLVVALVFSFLTGWNDVLFASVLTSPET 232


>gi|326940556|gb|AEA16452.1| glycine betaine transport system permease protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|206973541|ref|ZP_03234459.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|222096288|ref|YP_002530345.1| glycine betaine/l-proline ABC transporter , permease [Bacillus
           cereus Q1]
 gi|206747697|gb|EDZ59086.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|221240346|gb|ACM13056.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus Q1]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|161520581|ref|YP_001584008.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353231|ref|YP_001948858.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344631|gb|ABX17716.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337253|dbj|BAG46322.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 287

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 14/214 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  +RR     + +    L    + ++  G++   +P ++V       D         +
Sbjct: 21  PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +       K+    L AI A F      +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            + +  ++P +V  +   +S  W F+VA+E+I  
Sbjct: 193 RILLRAALPQIVTGLRTGLSLAWMFMVAAELIAA 226



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 25/178 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     I + + + VG  +G    I + ++P  Q L A P+  + P+++       
Sbjct: 87  SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       L+  G  + +   V+AG         E+ + + +     +R I+
Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           L    P  VTG  T    AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 196 LRAALPQIVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246


>gi|152975672|ref|YP_001375189.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024424|gb|ABS22194.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 279

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAADAFGSTASQKLFKVQLPLATGTIMAGINQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|317404024|gb|EFV84483.1| alkanesulfonate transporter [Achromobacter xylosoxidans C54]
          Length = 260

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+    ++ +     L+LL + G  + +  N   G  +      E+
Sbjct: 103 QMIRNIPVLALIPLVIL---WFGIEETAKLALLSL-GVFFPVYLNTFHGIRSVDPALIEM 158

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             S+ +TGWR +R +ILPG  P  + G   A G  W   IV+E  S
Sbjct: 159 GRSYGLTGWRLYRDVILPGALPSTLVGLRFALGLVWVILIVTETIS 204


>gi|225181346|ref|ZP_03734790.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167927|gb|EEG76734.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 280

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A  ISL+         A+S R+   + P+LD+MQ++P   +L   V++F        
Sbjct: 95  VLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPAFVYLIPAVMFFR------- 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +G+ + AI A F   V          +  +P +L E + SF  +  QK   + +P ++P
Sbjct: 148 VGS-VPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATPRQKLIKVQLPLALP 205


>gi|114778546|ref|ZP_01453373.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1]
 gi|114551135|gb|EAU53695.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1]
          Length = 262

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 34/186 (18%), Positives = 81/186 (43%), Gaps = 15/186 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLY----VIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           ++ SIG  +  F ++        ++W+   + + R+ + + ++++I   VG+  G  P++
Sbjct: 36  SFSSIGEAIQRFAFEPSKRTGEILLWVDTASSLSRLAMGVGVSAVIGFFVGVACGVVPYV 95

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + + PF ++L+  P     P++        ++      +L++ G   +I  +V      
Sbjct: 96  RANLSPFVRVLSMVPPIALLPILFIVFGLGEVSK----VVLIVLGIAPFIARDVQQRVEE 151

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P++    A +   + W+    +++P + P  +     + G AW   I +E  +      
Sbjct: 152 LPHEQMIKAQTLGASTWQIIIRVVIPQVMPRLLNAVRLSLGPAWLFLIAAEAIA------ 205

Query: 535 RTTGLG 540
            T GLG
Sbjct: 206 STDGLG 211


>gi|15891014|ref|NP_356686.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15159339|gb|AAK89471.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 15/185 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A +++LL       +A  ++ L  VL PILD++Q++P   +L    +  +   P     
Sbjct: 100 TATILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPPYIYL-LPAIALLGYGPATA-- 156

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L A F +       +T      +   PR+  E+  +  L+ WQ F  + +PF++P ++
Sbjct: 157 --LIATFIVAMPPAIRLT---SLGIRMTPREFIELGHASGLTPWQMFMKIRLPFAIPSVM 211

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+   +  VV + ++  G       G+G  I  A++  D+   + A + ++ +  
Sbjct: 212 AGINQSLMMAFGMVVIAGIVGSG-------GLGETIYGAVRTLDIATSINAAIAIVILTM 264

Query: 254 LYDQL 258
           + D+L
Sbjct: 265 VLDRL 269


>gi|307727160|ref|YP_003910373.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307587685|gb|ADN61082.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 295

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++   F FV  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 102 LLRGYLLGAAFAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  + Y    ++P  L    R++ L+G +    + VP ++P
Sbjct: 160 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGVRHVLLILVPAALP 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 213 SILAGLRVGWAFAWRTLIAAELV 235


>gi|254502931|ref|ZP_05115082.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222439002|gb|EEE45681.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 263

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +++A V+ +          A + R    + P+LD+MQ+IP   +L   ++ 
Sbjct: 74  EETTETLALVIAASVVCMAVGIPIGVYGAHNPRFFAAMRPVLDLMQTIPTFVYLIPALIL 133

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +     A    I  +Q+          + + P  L E   +F  +  Q  W
Sbjct: 134 FGLGMVPGLIATVIFAIPAPIRLTQL---------GVSSTPTALLEAGEAFGATKSQLLW 184

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P+++P    GL   +M+S+S
Sbjct: 185 KIELPYALPQIMAGLTQTIMLSLS 208


>gi|328468887|gb|EGF39847.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus 10329]
          Length = 361

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+     + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 165 ARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   SF  +  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 220 TILGIQQ---VPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|261821087|ref|YP_003259193.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605100|gb|ACX87586.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 257

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V     
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GA A  +  +     VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +++LP   P   T    A G  W + I +E+ +       T+G+G
Sbjct: 170 LHVVLPDTLPELFTTVRLAIGVGWTSLIAAEMVA------ATSGIG 209



 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++ + +  R LSA  ++++       L   S  +  V  P +  ++ +P +  +   
Sbjct: 57  SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV+         IG E +  F IF +   ++      ++  + R    V+++   S  Q 
Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQI 168

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F ++ +P ++P L   + +++  GW  ++A+EM+
Sbjct: 169 FLHVVLPDTLPELFTTVRLAIGVGWTSLIAAEMV 202


>gi|118478145|ref|YP_895296.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|118417370|gb|ABK85789.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis str. Al Hakam]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|49479143|ref|YP_036874.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49330699|gb|AAT61345.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|78060617|ref|YP_367192.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77965167|gb|ABB06548.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +I+D +   L V  + ++   +TLR+ +          V       SRR+  +  P 
Sbjct: 61  APSEILDTL-ARLGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 119

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       K+    + A F +          ++   + ++ R
Sbjct: 120 FQALRAIPSLAWVPVLLLWLGIDEAPKITLIAIGAFFPVH--------LAVVAGIRDVDR 171

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 172 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 223



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456
           VG  +G    I +  +P  Q L A P+  + P+++           LWL +       L+
Sbjct: 102 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 150

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + +   V+AG         E+ + + +     +R I+LP   P  VTG  T    
Sbjct: 151 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 210

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 211 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 243


>gi|260575135|ref|ZP_05843136.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259022757|gb|EEW26052.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 655

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 23/188 (12%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ I ++   V    A  S R   +  P+LD+MQ++P   +L   +++     P      
Sbjct: 153 AVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAYL-VPILFLFGFGP------ 205

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +AA+ A     +  M      +L +IP ++ + +R    +GWQ+   + +P ++P L+ 
Sbjct: 206 -VAALLATVIYAMPPMVRITTLALRSIPPEINDFARMVGCTGWQRLRKVLLPAALPDLMV 264

Query: 195 N----MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                +M+S++     V+ + MI  G       G+G  +  A++  D+ A + A L +  
Sbjct: 265 GVNQVIMLSLN----MVIIASMIGAG-------GLGFDVLNALRRLDIGAGVEAGLAITA 313

Query: 251 VIFLYDQL 258
           +    D+L
Sbjct: 314 LAVALDRL 321


>gi|218897809|ref|YP_002446220.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus G9842]
 gi|218544027|gb|ACK96421.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus G9842]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|163757527|ref|ZP_02164616.1| taurine ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162285029|gb|EDQ35311.1| taurine ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 422

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++ SII IP+G  +G          P  + +   P     PL++    ++ 
Sbjct: 231 SLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLIII---WFG 287

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     + +L+     W +     AG S         A S   + W+  R++ILP   P 
Sbjct: 288 IGEEGKV-ILLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQILRHVILPNSLPE 346

Query: 506 YVTGAITACGGAWNASIVSEV 526
             TGA  A G  W   + +E+
Sbjct: 347 IFTGARVAMGVCWGTVVAAEL 367



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GKVI         +F + +W MT +    +  +
Sbjct: 265 PIVEFMRPVPPLALIPLIIIWFGIGEEGKVI--------LLFLAALWIMTIAARAGVSGV 316

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                  + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++  
Sbjct: 317 RISKVHAAYSLGASKWQILRHVILPNSLPEIFTGARVAMGVCWGTVVAAELVAA 370


>gi|47060338|ref|NP_665793.2| ANL55 [Synechococcus elongatus PCC 7942]
 gi|81230349|ref|YP_398727.1| sulfonate ABC transporter, permease protein, putative
           [Synechococcus elongatus PCC 7942]
 gi|5823450|gb|AAD53164.1|AF176824_7 cytoplasmic membrane protein SrpM [Synechococcus elongatus PCC
           7942]
 gi|47059669|gb|AAM81180.2| ANL55 [Synechococcus elongatus PCC 7942]
 gi|81170321|gb|ABB58659.1| sulfonate ABC transporter, permease protein, putative
           [Synechococcus elongatus PCC 7942]
          Length = 266

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 16/197 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V ++ A  + +PVG+  G  P I        Q +       + P+ V       
Sbjct: 78  SLQRVAVGLLAAIAVGVPVGLLFGLVPMIERSASGALQFIRMISPLSWMPIAVMAFGIGD 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     +  L+     W IL +  +G +A  +    +A S   T     R I++P I P 
Sbjct: 138 LP----VYFLLAIAAVWPILLSTSSGTAAVNHKLLLLARSLCATRSETIRRIVIPAIVPQ 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE---VVLGVLIM 562
            + G   A G  W   + +E+         ++GLG +I ++ ++ ++ E   V+L + I+
Sbjct: 194 ILVGVRLAIGTIWIVLVPAEMLG------VSSGLGYFILDTRDRIAYNELTAVLLAIGII 247

Query: 563 CCFVLALNRFL---WHP 576
            C +    +FL   W P
Sbjct: 248 GCALDWSLQFLQKYWQP 264


>gi|229541806|ref|ZP_04430866.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229326226|gb|EEN91901.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 217

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           K RR   +++ I  ++Q+ P L  L F +  F        IG +L AI A+F   V  + 
Sbjct: 46  KYRRAANIVMGIAGVIQTFPSLAILAFFIPIFG-------IG-KLPAIAALFFYSVLPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            + Y  +  I   L E  R   ++GW++  +L +P ++P ++  + +S
Sbjct: 98  RNTYTGVKGIDPKLVEAGRGMGMTGWERVIHLELPLAIPVIMAGIRLS 145


>gi|28898501|ref|NP_798106.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153836267|ref|ZP_01988934.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ3810]
 gi|260365056|ref|ZP_05777627.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus K5030]
 gi|260879548|ref|ZP_05891903.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AN-5034]
 gi|260894977|ref|ZP_05903473.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus Peru-466]
 gi|260901013|ref|ZP_05909408.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ4037]
 gi|28806719|dbj|BAC59990.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750542|gb|EDM61287.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ3810]
 gi|308086053|gb|EFO35748.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus Peru-466]
 gi|308093320|gb|EFO43015.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AN-5034]
 gi|308110813|gb|EFO48353.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ4037]
 gi|308111687|gb|EFO49227.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus K5030]
          Length = 361

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S+     + PILD MQ+ P   +L   V+ F     G V G  +  IFA+    V  +
Sbjct: 165 ARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T    Q    +P +L E   SF  +  Q  + + +P ++P    G+   +M+S+S     
Sbjct: 220 TILGIQQ---VPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297


>gi|226312298|ref|YP_002772192.1| sulfonate ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226095246|dbj|BAH43688.1| putative sulfonate ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 251

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+ V+FPL    + ++ LN +  +  ++  G  W +  N  +G    P  ++ VA 
Sbjct: 97  LQSIPSIVWFPL---AIIWFGLN-DFSILFIVTIGATWTMTVNATSGFKNVPPLYQRVAK 152

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           ++  TG+ + R +ILP   P  ++G   A   +W A
Sbjct: 153 TYGSTGFHFVRTVILPASVPQIISGLRIAWAFSWRA 188


>gi|104779498|ref|YP_605996.1| taurine ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108485|emb|CAK13179.1| taurine ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 279

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVG+ IG+       + P  +     P   + PL+V       L+  + L  L IF   
Sbjct: 103 IPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELS-KVLLIYLAIFAP- 160

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I      G           A S   T  +  R++ILP   P  +TG     G  W+  
Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTL 218

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T+GLG  +  + +      VVLG+L++     AL 
Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALIAFALE 261


>gi|30020911|ref|NP_832542.1| glycine betaine transport system permease protein [Bacillus cereus
           ATCC 14579]
 gi|218232077|ref|YP_002367503.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus B4264]
 gi|29896464|gb|AAP09743.1| Glycine betaine transport system permease protein [Bacillus cereus
           ATCC 14579]
 gi|218160034|gb|ACK60026.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus B4264]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 35/180 (19%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 170

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 171 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 220

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+S           +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 221 SLS-----------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|323945547|gb|EGB41601.1| inner membrane transport system [Escherichia coli H120]
          Length = 226

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V       
Sbjct: 83  SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198

Query: 506 YVTG 509
            +TG
Sbjct: 199 ILTG 202


>gi|295111098|emb|CBL27848.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synergistetes bacterium SGP1]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 30/220 (13%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV------ 437
            ++  RV    ++A  + +P+G+ +G+   ++  +   A L    P   + PLV      
Sbjct: 63  TVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLFRPIPPLSWIPLVLAWFGV 122

Query: 438 --------VSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFH 487
                   +   ++Y    N+ +S+L I   G  + IL N I G  +      +      
Sbjct: 123 ASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTIGGVQSVRVTLIDAVRVLG 182

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG-----AY 542
            + W+  RY+ILP   P   TG     G AW   + +E+   G I    +G+G     AY
Sbjct: 183 ASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMP-GSI----SGVGYLITHAY 237

Query: 543 IAESTE---KGSFPEVVLGVLIMCCFVLALNR-FLWHPLY 578
               T+    G     V+G+LI   F+L   R F W  LY
Sbjct: 238 TVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLY 277


>gi|239832460|ref|ZP_04680789.1| choline ABC transporter, permease protein [Ochrobactrum intermedium
           LMG 3301]
 gi|239824727|gb|EEQ96295.1| choline ABC transporter, permease protein [Ochrobactrum intermedium
           LMG 3301]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA    L   + P+LD+MQ++P   +L   +V+F + + PG      LA +  +  + + 
Sbjct: 118 AAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATVIFVIPAPIR 172

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
                +  +    P  L E   +F  S  Q  W + +P++MP    GL   +M+S+S
Sbjct: 173 LTQLGISST----PSSLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225


>gi|104782479|ref|YP_608977.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95111466|emb|CAK16186.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 22/114 (19%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++ P+   ++ +P+LG++    ++  N    K++   LAA +         M  + ++ L
Sbjct: 87  LIAPLFHALRQVPMLGWIPLIALWLGNGEAAKLLIVSLAAFYP--------MVLNTFEGL 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +     EV +   L  WQ+   + +P ++P +   ++ +++  W   V SE+
Sbjct: 139 RQVDTRHREVGQVLALDRWQQLRLVLLPAALPSIATGVLQALAFAWVTAVGSEL 192


>gi|42781872|ref|NP_979119.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
 gi|42737796|gb|AAS41727.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|262376493|ref|ZP_06069722.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
 gi|262308632|gb|EEY89766.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
          Length = 314

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 19/190 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S++ IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +     ++   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRLVDRSLIEAGFTLGTNKFKSLLHVVIPAALPEIYRNLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMCCFV---- 566
            AW   IV+E+         T+G+  +I +     +F  V     ++GV+ + C V    
Sbjct: 248 WAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVIGLLCDVILMK 301

Query: 567 LALNRFLWHP 576
           L    F W P
Sbjct: 302 LGQRLFKWKP 311


>gi|190149839|ref|YP_001968364.1| ABC transporter permease [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307245387|ref|ZP_07527475.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249732|ref|ZP_07531711.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307254342|ref|ZP_07536180.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258800|ref|ZP_07540532.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260979|ref|ZP_07542661.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263161|ref|ZP_07544782.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914970|gb|ACE61222.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306853728|gb|EFM85945.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858240|gb|EFM90317.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306862641|gb|EFM94597.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867151|gb|EFM99007.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869281|gb|EFN01076.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871523|gb|EFN03246.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 20/204 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T + +++ + +  L   + A   + S+ L   L+P+L I Q+IP+     F +  
Sbjct: 52  QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + L+ G  + +++A    I    V   T + Y  L N P+   E++++  +        
Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAMLLL 163

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P L   + +++S      VA    VVG+ V    G+G Y+ L    +    +L
Sbjct: 164 VRLPAALPALASGLRIAVS------VAPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216

Query: 243 YAMLTMLGVI-----FLYDQLLFR 261
           +A LT+L ++     F+ D+LL R
Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240


>gi|158424093|ref|YP_001525385.1| ABC transporter [Azorhizobium caulinodans ORS 571]
 gi|158330982|dbj|BAF88467.1| ABC transporter [Azorhizobium caulinodans ORS 571]
          Length = 246

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +   V +++++   I +G+ +G +       +P    L + P    +PLV+     + 
Sbjct: 59  TFYAFAVAVVLSTAAGITLGVLLGMKRLAGEVAEPILVNLYSLPKVTLYPLVLLI---FG 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  +  ++  ++ G     LF + A     P  ++  A+   +T W+    +ILP I P 
Sbjct: 116 LGISARIAFGIMHGLIPLTLFTMNAILQLKP-VYRRSAAVMGLTSWQTAVSVILPAILPQ 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TGA          S+       G +     GLG  +  + E+G  P V+   L++   
Sbjct: 175 VITGA------RLGVSLCLLGVLIGEMFASRNGLGYMVTHAMERGDMPTVLAVALLIAIV 228

Query: 566 VLALNRFL 573
            L  N  L
Sbjct: 229 ALVANGLL 236


>gi|94311158|ref|YP_584368.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355010|gb|ABF09099.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Cupriavidus metallidurans CH34]
          Length = 347

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F + Y         AA+F I  +  + +  
Sbjct: 178 SRRIGYWIHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 229

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  +  + +   +V+R+   SGW     + +P ++P +   + M +   +  +V +EM
Sbjct: 230 LTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 289

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y+  A      +  +YA L ++ ++F
Sbjct: 290 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 323


>gi|297623965|ref|YP_003705399.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297165145|gb|ADI14856.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 27/193 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L+A  + +L       L A S      L P+LD MQ++P   +L   V +F + L PG 
Sbjct: 98  VLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGLGLVPGV 157

Query: 131 VIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           V       +FA+    ++ N+       L  +P+D+ E + +F  + WQ+   + +P + 
Sbjct: 158 VA----TVVFALPPLVRLTNL------GLRQVPKDIVEAAEAFGGTRWQRLRKVELPAAR 207

Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P    G+  ++M+S+S     VV + +I  G       G+G  +   +   D+     A 
Sbjct: 208 PMLLAGVNQSIMLSLS----MVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAG 256

Query: 246 LTMLGVIFLYDQL 258
           L ++ +  + D+L
Sbjct: 257 LAIVIMAVVLDRL 269


>gi|163740528|ref|ZP_02147922.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter
           gallaeciensis 2.10]
 gi|161386386|gb|EDQ10761.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter
           gallaeciensis 2.10]
          Length = 283

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158
           LVP++  +  IP +  L   V++F         G + A+ +A+     +  T  + Y ++
Sbjct: 126 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 176

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+     
Sbjct: 177 DNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAEH- 235

Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGV-----IFLYDQLLFR 261
                GIG+YI  A    DL  +    A+L++LGV     I L ++ L R
Sbjct: 236 -----GIGAYILEAGSLYDLERLFAGVAILSILGVLVSSLIGLIERRLLR 280


>gi|206971955|ref|ZP_03232904.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH1134]
 gi|206733340|gb|EDZ50513.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH1134]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|149911834|ref|ZP_01900436.1| putative spermidine/putrescine ABC transporter, permease protein
           [Moritella sp. PE36]
 gi|149805087|gb|EDM65111.1| putative spermidine/putrescine ABC transporter, permease protein
           [Moritella sp. PE36]
          Length = 285

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 122 YFMNLY----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           + +NL+    P K++  E A IFA+    +  M   +Y S+  I ++L E ++    S +
Sbjct: 133 FLLNLHIIDKPLKLMYTEFAVIFALVYILLPFMILPLYSSIEKIDKNLIEAAKDLGASKF 192

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
             F  + +P +MPG++  M++       F+ A  M  + D V
Sbjct: 193 TTFLKVELPLTMPGIIAGMLL------VFLPAMGMFYIADLV 228


>gi|33594704|ref|NP_882348.1| ABC transporter permease protein [Bordetella pertussis Tohama I]
 gi|33598890|ref|NP_886533.1| ABC transporter permease protein [Bordetella parapertussis 12822]
 gi|33603969|ref|NP_891529.1| ABC transporter permease protein [Bordetella bronchiseptica RB50]
 gi|33564780|emb|CAE44108.1| ABC transporter permease protein [Bordetella pertussis Tohama I]
 gi|33568945|emb|CAE35359.1| ABC transporter permease protein [Bordetella bronchiseptica RB50]
 gi|33575020|emb|CAE39686.1| ABC transporter permease protein [Bordetella parapertussis]
 gi|332384115|gb|AEE68962.1| ABC transporter permease protein [Bordetella pertussis CS]
          Length = 293

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILG 114
           L    LP  A+ +   +       +   FV  TLA  S R G  L+  L  M   +P + 
Sbjct: 84  LGSGQLPARAALSFSVLFKGYAAGVALAFVLTTLAV-STRFGRDLLSTLTAMFNPLPAIA 142

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F  L  G ++       F +  S +W M  +MY     +   L    R++ L
Sbjct: 143 LLPLAMLWF-GLGQGSLV-------FVLIHSVLWAMAVNMYSGFLTVSETLRMAGRNYGL 194

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 195 TGLRYVLGILVPAALPSILSGLRIAWAFAWRTLIAAELV 233


>gi|33597693|ref|NP_885336.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella parapertussis 12822]
 gi|33602539|ref|NP_890099.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella bronchiseptica RB50]
 gi|33574121|emb|CAE38448.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33576978|emb|CAE34058.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 275

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 9/163 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R++  + +A+ +   +GI IG         +P   L    P   + P+++  +    
Sbjct: 79  SMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPILLLLIGV-- 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N    L++     + ++ NV+AG          VA S   +  + +  +I+PGI PY
Sbjct: 137 --DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFKVIVPGILPY 194

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G AW A I +E+     +   + GLG  I E++E
Sbjct: 195 LITGVRLGSGYAWRALIAAEM-----LAASSYGLGFMIYEASE 232


>gi|322372964|ref|ZP_08047500.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C150]
 gi|321278006|gb|EFX55075.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C150]
          Length = 304

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           L P ++++  IP  + GF+   VV  F+    G      L+  F +F   +  +TF    
Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +L  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V  
Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237

Query: 217 DTVIP 221
             V+P
Sbjct: 238 SAVVP 242


>gi|220924754|ref|YP_002500056.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949361|gb|ACL59753.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 251

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +++ +P L ++ F +++F  + P        AA+F I     W + F+ + ++  + 
Sbjct: 97  VVRVLRPVPGLAWVPFAIIWF-GVSPA-------AAVFIIAVGVFWIVYFASHGAIRGVD 148

Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+ +F   S  ++   +  P + PG++  +  ++   W  VVA+E+  V      
Sbjct: 149 RDLVEVAEAFGFRSAPERLLTVVWPAATPGILVGVRTAIGQAWMAVVAAEIFGVA----- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             G+G  +   ++   LLA    ++ ML +  LY 
Sbjct: 204 --GLGQRM---MQASTLLATDIVVVYMLTMALLYG 233


>gi|47569049|ref|ZP_00239739.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus
           cereus G9241]
 gi|47554318|gb|EAL12679.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus
           cereus G9241]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|329571840|gb|EGG53518.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1467]
          Length = 288

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102
           P DI  D  P+   V +LP  A    +  LSA+V +         +   S + G   L P
Sbjct: 53  PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 109

Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L
Sbjct: 110 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 168

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++    
Sbjct: 169 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 228

Query: 219 VIP 221
           V+P
Sbjct: 229 VMP 231


>gi|262281438|ref|ZP_06059219.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202]
 gi|262257264|gb|EEY76001.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202]
          Length = 265

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + +
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W      
Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    Q+L R ++
Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQILERYLL 257

Query: 265 VWSNKFR 271
            W + ++
Sbjct: 258 RWHSGYQ 264



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         VLA  L R+L  WH  Y
Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQILERYLLRWHSGY 263


>gi|297203734|ref|ZP_06921131.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197711783|gb|EDY55817.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 257

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LL+++ + W +L   + G         E A S+ +  W   RY++ P   PY +TG   A
Sbjct: 124 LLVVYASFWQVLIQTLYGVQDVDPVADETARSYGLGAWARIRYVLWPTALPYVMTGVRLA 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCF 565
                  ++   +A  G + +   GLGA IA +    + PE+        VLG+LI    
Sbjct: 184 A------AVALILAITGELVIGAPGLGARIAVAQNSQAVPEMYALIVVTGVLGLLINVGA 237

Query: 566 VLALNRFL-WH 575
                R L WH
Sbjct: 238 RTVERRALAWH 248


>gi|33592075|ref|NP_879719.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis Tohama I]
 gi|33571719|emb|CAE41218.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|332381491|gb|AEE66338.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis CS]
          Length = 275

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 9/163 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R++  + +A+ +   +GI IG         +P   L    P   + P+++  +    
Sbjct: 79  SMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPILLLLIGV-- 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N    L++     + ++ NV+AG          VA S   +  + +  +I+PGI PY
Sbjct: 137 --DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFKVIVPGILPY 194

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            +TG     G AW A I +E+     +   + GLG  I E++E
Sbjct: 195 LITGVRLGSGYAWRALIAAEM-----LAASSYGLGFMIYEASE 232


>gi|320326464|gb|EFW82516.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331757|gb|EFW87695.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330872583|gb|EGH06732.1| taurine ABC transporter permease [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 291

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S G+++    Y D      LG  ++ R+ + +  A +  IP+GI IG          P  
Sbjct: 77  SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V        +  L L  L IF     I      G           
Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTKVRA 191

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T W+  R+++LP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +  + +      VVLG+L++     A+ 
Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273


>gi|254441234|ref|ZP_05054727.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198251312|gb|EDY75627.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 345

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 25/193 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +LSA V+ +         AA   RL   + P+LD+MQ++P   +L   +V+F + + PG 
Sbjct: 168 VLSACVVCMSIGVPIGIGAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 227

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V     A +  +  + +  +T   +  + + P+ L E + +F  +  QK   + +P +MP
Sbjct: 228 V-----ATVIFVLPASI-RLT---HLGISSTPQSLLEAADAFGATKRQKLVKVELPSAMP 278

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
               GL   +M+S+S          M+V+   ++   G+G  +  A+   D      + L
Sbjct: 279 QIMTGLNQTIMLSLS----------MVVIA-ALVGADGLGVPVVRALNTVDTAKGFESGL 327

Query: 247 TMLGVIFLYDQLL 259
            ++ V  + D++L
Sbjct: 328 IIVVVAIMLDRML 340


>gi|146338667|ref|YP_001203715.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191473|emb|CAL75478.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 258

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RVV   ++A+ I +P+G+ +G    + + ++PF       PA+ F PL++      
Sbjct: 67  MTVWRVVGGFVLAAAIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG 126

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L       LL+IF G+ + I+  +         D  E A +   +       ++LP   
Sbjct: 127 ELQ-----KLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIARVLLPSAA 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 182 PDIAEVLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 218


>gi|91777725|ref|YP_552933.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91690385|gb|ABE33583.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 275

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L ++++IP +  +   VV+F        IG EL+ +  I  + +  M  S Y ++  I 
Sbjct: 118 VLQMLRTIPFIALVPIFVVWFG-------IG-ELSKVALIVGAAISPMYLSTYHAIRGID 169

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             L E+ R+FRL+   +   + +P ++PG++  +  S +     +VA+E I
Sbjct: 170 PKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQI 220


>gi|295397453|ref|ZP_06807539.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
 gi|294974306|gb|EFG50047.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 16/192 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129
           R+   +  SLL       L AKS+     +  +L  +QS+P + +L   +++F +N    
Sbjct: 61  RLAIGLSASLLLGTSIGILIAKSKTADDTIGSMLLALQSVPSIVWLPLAIMWFGLN---- 116

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +     + M  ++   + N+P    + +R+    G   F  +  P S+
Sbjct: 117 -----EKAVIFIVILGGTFVMALNIRTGIKNVPPLYIKAARTMGSGGIDLFRRVIFPASI 171

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +V    ++ +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ + 
Sbjct: 172 PHVVTGSRLAWAFAWRSLMAGELLSTG------PGLGYTLRYASDFGDMSLVICVMIIIG 225

Query: 250 GVIFLYDQLLFR 261
            +  + DQ +F+
Sbjct: 226 VIGAIVDQFIFQ 237



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 18/197 (9%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQ 419
           WQS    ++    + ++Y    G +  FR + + + AS++    +GI I         I 
Sbjct: 39  WQSF---ISGIADKTLIY----GLVASFRRLAIGLSASLLLGTSIGILIAKSKTADDTIG 91

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
                L + P+ V+ PL    + ++ LN    +  ++I G  + +  N+  G    P  +
Sbjct: 92  SMLLALQSVPSIVWLPL---AIMWFGLNEKA-VIFIVILGGTFVMALNIRTGIKNVPPLY 147

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A +    G   +R +I P   P+ VTG+  A   AW + +  E+ S G       GL
Sbjct: 148 IKAARTMGSGGIDLFRRVIFPASIPHVVTGSRLAWAFAWRSLMAGELLSTG------PGL 201

Query: 540 GAYIAESTEKGSFPEVV 556
           G  +  +++ G    V+
Sbjct: 202 GYTLRYASDFGDMSLVI 218


>gi|229085575|ref|ZP_04217810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-44]
 gi|228697723|gb|EEL50473.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-44]
          Length = 208

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R   +L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 44  LASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 97

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 98  --IRFTDL-GIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 152

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 153 ---------MVVTASLVGAPGLG 166


>gi|91778491|ref|YP_553699.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296156328|ref|ZP_06839167.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1]
 gi|91691151|gb|ABE34349.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|295893834|gb|EFG73613.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           AKSR + M++ P+LD+MQ++P   +L    + F     G+V G     IFA+  +     
Sbjct: 114 AKSRTIEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVPGILSTVIFAMPPAVRLT- 169

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
                  + ++ R++ E  ++F  + WQ  + +  P ++P    G+   +MM++S     
Sbjct: 170 ----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALS----M 221

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 222 VIIASMVGAG-------GLGNDVLASIQRLDI 246


>gi|83716597|ref|YP_438999.1| taurine ABC transporter permease [Burkholderia thailandensis E264]
 gi|167615544|ref|ZP_02384179.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257142105|ref|ZP_05590367.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83650422|gb|ABC34486.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 283

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A +  IP G+ I     +   + P  +     P   + PL+V       
Sbjct: 93  SLARITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152

Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+I+ T +  L     AGAS         A+S   T  +   +++LP   P
Sbjct: 153 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRLKLLCHVVLPSALP 207

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++  
Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261

Query: 565 FVLALN 570
             +AL 
Sbjct: 262 IAIALE 267


>gi|319781844|ref|YP_004141320.1| choline ABC transporter permease protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317167732|gb|ADV11270.1| choline ABC transporter, permease protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 25/174 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   ++  V++P+LD+MQ++P   +L   +  F +   PG ++      IF I T+   
Sbjct: 122 AAHKPKVYRVMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 177

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
                 +  + ++P+ + E   +F  +  Q  W + +P ++P    GL  ++M+S+S   
Sbjct: 178 T-----HLGVVSVPKSIVEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 229

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + +I  G       G+G+ I  A+  + +   L A L ++ +  + D++
Sbjct: 230 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275


>gi|257483752|ref|ZP_05637793.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|330987195|gb|EGH85298.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012097|gb|EGH92153.1| taurine ABC transporter permease [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 291

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 10/168 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI IG          P  +     P   + PL+V        +  L L  L IF    
Sbjct: 116 PIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP-- 172

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I      G           A S   T W+  R+++LP   P  +TG     G  W+  +
Sbjct: 173 -IAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLV 231

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 232 AAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273


>gi|238755713|ref|ZP_04617047.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia ruckeri ATCC 29473]
 gi|238706080|gb|EEP98463.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 175 ARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 229

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 230 TI---LGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 282

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 283 VVIASMIAVG-------GLGQMVLRGIGRLDM 307


>gi|229030467|ref|ZP_04186507.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1271]
 gi|228730906|gb|EEL81846.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1271]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|222080199|ref|YP_002540062.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221738844|gb|ACM39623.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 293

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P K +  E + I  I +  +  +  ++Y SL  I R+L   +R+   + WQ F  + +P 
Sbjct: 150 PLKFLYTEFSVILGILSFVLPYIILNIYVSLDGIDRNLLHAARTLGCTSWQAFLEITLPL 209

Query: 188 SMPGLVWNMMMSM 200
           S+PGL   +++S+
Sbjct: 210 SLPGLCSGVLLSL 222


>gi|149908274|ref|ZP_01896938.1| putative permease [Moritella sp. PE36]
 gi|149808816|gb|EDM68749.1| putative permease [Moritella sp. PE36]
          Length = 296

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 21/196 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            T+R +S ++IS +   +         A+S R+  V+ PILDIMQ++P   +L   V   
Sbjct: 102 NTMRTMSIILISTMLAVIIGIPIGISMARSNRVQSVVTPILDIMQTMPAFVYLIPVV--- 158

Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           M L  GK+ G     I+A+    ++ N+   +      + +++ E + ++  S  Q+ + 
Sbjct: 159 MLLGIGKIPGVIAVIIYAVPPVIRLTNLGIRL------VDKEVLEAATAYGASPMQRLFG 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q     L
Sbjct: 213 VQLPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLGL 265

Query: 243 YAMLTMLGVIFLYDQL 258
              L ++ +  ++D++
Sbjct: 266 MNGLAIVALAIIFDRI 281


>gi|329117384|ref|ZP_08246101.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parauberis NCFD 2020]
 gi|326907789|gb|EGE54703.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parauberis NCFD 2020]
          Length = 311

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +L+ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFVRSLFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 VDSLKAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|148265891|ref|YP_001232597.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
 gi|146399391|gb|ABQ28024.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
          Length = 289

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W+IL N I+G       + + A S   +    +  +ILP   P  V+GA      +  A 
Sbjct: 169 WFILINTISGVKCVDPLYLKAAKSMGTSDTDLFIKVILPASIPSIVSGARLGVKSSLMAV 228

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +E+ +        +GLG +I  S      PE+  G+L +  F L +N  L
Sbjct: 229 IGAEMLA------AKSGLGFFIQNSHLMYRIPEMYAGILALAIFGLLINYLL 274


>gi|254821792|ref|ZP_05226793.1| ABC transporter permease protein [Mycobacterium intracellulare ATCC
           13950]
          Length = 281

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 8/148 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +++ +R+L+   ++ +       L  +SR    V  P++++ + IP +  +   ++ F  
Sbjct: 83  AQSLIRILTGFGLAAVVGVATGVLLGRSRLFADVFGPLVELARPIPAIAMVPVAILLFPT 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G V    LAA F I  S           ++  +P   E+  R+     WQ    + +
Sbjct: 143 DEAGIVFITFLAAYFPIMVST--------RHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P  +PG+   + + M   W  V+++EMI
Sbjct: 195 PGILPGVFGGLSVGMGVAWICVISAEMI 222


>gi|84685060|ref|ZP_01012959.1| ABC transporter, inner membrane subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666792|gb|EAQ13263.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2654]
          Length = 281

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           G V  P ++ M S P   F+   +V+F      K++    AA+F I          +   
Sbjct: 115 GRVFDPFVNAMNSTPGAAFIPLIIVWFGLYTEAKIVVVWNAALFPIL--------INTAA 166

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            + +  RDL E+++SF    W  FW + VP ++P ++
Sbjct: 167 GIASANRDLTEMAQSFGAGRWSLFWQVMVPDALPSIL 203


>gi|254228036|ref|ZP_04921466.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262395984|ref|YP_003287837.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|151939532|gb|EDN58360.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262339578|gb|ACY53372.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
          Length = 299

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A S R+  V+ P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ASSNRIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+ + + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASSKQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|329944190|ref|ZP_08292449.1| glycine betaine transport system permease protein opuAB
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530920|gb|EGF57776.1| glycine betaine transport system permease protein opuAB
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 292

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A  T + +  A + +L+F       AA+++ +  ++ P+LD+MQ++P   +L  +V++
Sbjct: 92  ENAMETLVLVTIATLTALVFAIPLGIWAARNKYVSAIIRPVLDLMQTMPAFVYLIPSVLF 151

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178
           F + + PG            +F + +++M   +  +   +  + ++  E  RSF  + WQ
Sbjct: 152 FSIGVVPG------------MFATLIFSMPPGVRMTELGIKQVDKETVEAGRSFGATDWQ 199

Query: 179 KFWYLGVPFSMP 190
               + +P ++P
Sbjct: 200 ILRGIQLPLAVP 211



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           IAW +  + +   T    L +I LG       T+  V +  + A +  IP+GIW     +
Sbjct: 65  IAWMAKSWRLALGTAITFLLIISLGQWENAMETLVLVTIATLTALVFAIPLGIWAARNKY 124

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLL--MIFGTQWYILFNVI 469
           +S+ I+P   L+   PA V+    +  V ++ +   P ++ +L+  M  G +   L    
Sbjct: 125 VSAIIRPVLDLMQTMPAFVYL---IPSVLFFSIGVVPGMFATLIFSMPPGVRMTEL---- 177

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            G      +  E   SF  T W+  R I LP   P  + G
Sbjct: 178 -GIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAG 216


>gi|315029509|gb|EFT41441.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4000]
          Length = 313

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102
           P DI  D  P+   V +LP  A    +  LSA+V +         +   S + G   L P
Sbjct: 76  PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 132

Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L
Sbjct: 133 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 191

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++    
Sbjct: 192 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 251

Query: 219 VIP 221
           V+P
Sbjct: 252 VMP 254


>gi|56698439|ref|YP_168813.1| sulfonate ABC transporter, permease protein, putative [Ruegeria
           pomeroyi DSS-3]
 gi|56680176|gb|AAV96842.1| sulfonate ABC transporter, permease protein, putative [Ruegeria
           pomeroyi DSS-3]
          Length = 262

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 18/156 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G   G++ A I    FT  V     + Y ++
Sbjct: 105 LVPLVAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIALGTFTPTV----VATYGAV 155

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF L  W     + +P ++PG++  + +S++ G   +VA+EM+     
Sbjct: 156 DNVDRGLIRMGQSFGLGWWSIVRKIVLPGALPGILSGLRVSLAIGIILLVAAEMLGAEH- 214

Query: 219 VIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252
                GIG+YI  A A+ + + L     +L+ LGV+
Sbjct: 215 -----GIGAYILQAGALYDLERLFAGVVILSCLGVL 245


>gi|222153113|ref|YP_002562290.1| phosphate ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113926|emb|CAR42145.1| putative phosphate ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 311

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   +V  +   L+ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQIVVPFVRTLFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 VDSLKAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|194292308|ref|YP_002008215.1| nitrate-sulfonate transport system, inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193226212|emb|CAQ72161.1| putative nitrate-sulfonate transport system, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 319

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F + Y         AA+F I  +  + +  
Sbjct: 150 SRRIGYWVHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 201

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  +  + +   +V+R+   SGW     + +P ++P +   + M +   +  +V +EM
Sbjct: 202 LTWSGVAGVNKSYYDVARTLGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 261

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y+  A      +  +YA L ++ ++F
Sbjct: 262 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 295


>gi|148974933|ref|ZP_01811913.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3]
 gi|145965442|gb|EDK30691.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3]
          Length = 271

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W N+
Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271


>gi|163940536|ref|YP_001645420.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
 gi|163862733|gb|ABY43792.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 35/180 (19%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 170

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 171 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 220

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+S           +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 221 SLS-----------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|332162774|ref|YP_004299351.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667004|gb|ADZ43648.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330861135|emb|CBX71398.1| glycine betaine/L-proline transport system permease protein proW
           [Yersinia enterocolitica W22703]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 191 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 245

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 246 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 298

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 299 VVIASMIAVG-------GLGQMVLRGIGRLDM 323


>gi|257067829|ref|YP_003154084.1| carbohydrate ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558647|gb|ACU84494.1| carbohydrate ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 291

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 34/141 (24%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRL-------------GMVLVPILDIMQSIP 111
           A+ T  R++  +++  L  + +A +  + + L              + L+P  DI+Q   
Sbjct: 91  AAVTVARVVGQLLLCALAGYAFARMTFRGKNLLFALVLSILMVPYQIYLIPQYDIVQQ-- 148

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            LG+L              V G     IF+ F       TF M Q    +PR LEE +R 
Sbjct: 149 -LGWLN------------TVAGIAAPGIFSAFG------TFLMRQHFMGMPRSLEEAARL 189

Query: 172 FRLSGWQKFWYLGVPFSMPGL 192
              + WQ FW +  P S P L
Sbjct: 190 DGANPWQTFWRIMFPLSGPAL 210


>gi|163746754|ref|ZP_02154111.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161379868|gb|EDQ04280.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 277

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +LSA V+ +          A   RL   + P+LD+MQ++P   +L   +V+F + + PG 
Sbjct: 100 VLSACVVCMGVGVPIGIAVAHRPRLYAWVAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +          I  +Q+          + + P+ L E +++F     Q  W + +P+++P
Sbjct: 160 IATVIFVLPAPIRLTQL---------GISSTPKALLEAAQAFGAKPRQTLWKIELPYALP 210

Query: 191 ----GLVWNMMMSMS 201
               GL   +M+S+S
Sbjct: 211 QIMTGLNQTIMLSLS 225


>gi|313894852|ref|ZP_07828412.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976533|gb|EFR41988.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 247

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + + +A  I  P+GI +G+ P I+  + P   L    P   F P+V+  +    
Sbjct: 58  SLMRIALGLSLAVAIGYPIGILMGYFPRINRILAPMLYLAYPVPKIAFLPVVMLLLGVGE 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L + L+++F     ++  V    +  P    E       + W+  R+I+LP   P 
Sbjct: 118 AGKILLIFLIIVF----QVVVAVRDATAGIPAATYEPLRVLGASFWQMVRHIVLPASLPK 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           ++T    A   A +    +E  ++G  +    G+G YI ++
Sbjct: 174 FITAVRIAMATAISVLFFTE--TFGTKY----GIGYYIMDA 208


>gi|302543428|ref|ZP_07295770.1| putative nitrate ABC transporter, permease protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302461046|gb|EFL24139.1| putative nitrate ABC transporter, permease protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 281

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 29/151 (19%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + +  R+L+   ++ +   V  T  A+S     +L P+L++++ IP +  +   ++ 
Sbjct: 70  QDLTDSLTRILTGFALAAVLGVVVGTAIARSPLASDLLSPVLEVLRPIPAIALVPVAILL 129

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +         E   +F  FT+  + +  S   ++  +    EE   +     W+    
Sbjct: 130 FPS--------NEQGIVFITFTAAFFPVMVSTRHAVRALTPVWEEAVLTMGGGRWRVLGS 181

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++PG++  + + +   W  V+++EMI
Sbjct: 182 VVLPGALPGILGGLSVGIGVSWICVISAEMI 212


>gi|260767494|ref|ZP_05876430.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
 gi|260617394|gb|EEX42577.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
          Length = 280

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T + + +A  IS+L       +AA    +  V+ PILD+MQ++P   +L  T+V 
Sbjct: 89  QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVL 148

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI  +    +T   Y  +  +P  L E  ++F  S  +  +
Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEALIEAGKAFGASKMKLLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +       M+G    ++ S  +VV   ++   G+G  +  A+   ++   
Sbjct: 200 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 252

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ V  + D+L   P
Sbjct: 253 FEAGLAIVLVAIILDRLCKAP 273


>gi|221198282|ref|ZP_03571328.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221208221|ref|ZP_03581225.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221171869|gb|EEE04312.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221182214|gb|EEE14615.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 291

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465
           IG    +   + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL
Sbjct: 118 IGRYRALEDALLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPIL 171

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N + GA A        A S    G+  +  +ILPG  P   TG     G AW   + +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           + +  +      G+G +   S    ++P++V+G+ ++
Sbjct: 232 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            + R L   L+P L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +
Sbjct: 119 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +
Sbjct: 171 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 230

Query: 211 EMIV 214
           EMI 
Sbjct: 231 EMIA 234


>gi|29376307|ref|NP_815461.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255972548|ref|ZP_05423134.1| phosphate ABC transporter [Enterococcus faecalis T1]
 gi|255975661|ref|ZP_05426247.1| phosphate ABC transporter [Enterococcus faecalis T2]
 gi|256619252|ref|ZP_05476098.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC
           4200]
 gi|256853312|ref|ZP_05558682.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256959165|ref|ZP_05563336.1| ABC-type phosphate transport system [Enterococcus faecalis DS5]
 gi|256961740|ref|ZP_05565911.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96]
 gi|256964936|ref|ZP_05569107.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704]
 gi|257079202|ref|ZP_05573563.1| ABC-type phosphate transporter [Enterococcus faecalis JH1]
 gi|257082367|ref|ZP_05576728.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol]
 gi|257084998|ref|ZP_05579359.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1]
 gi|257087043|ref|ZP_05581404.1| ABC-type phosphate transport system [Enterococcus faecalis D6]
 gi|257090073|ref|ZP_05584434.1| ABC phosphate transporter permease [Enterococcus faecalis CH188]
 gi|257416279|ref|ZP_05593273.1| ABC-type phosphate transport system [Enterococcus faecalis AR01/DG]
 gi|257419480|ref|ZP_05596474.1| ABC phosphate transporter [Enterococcus faecalis T11]
 gi|257422375|ref|ZP_05599365.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|294779415|ref|ZP_06744816.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis PC1.1]
 gi|300860681|ref|ZP_07106768.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TUSoD Ef11]
 gi|29343770|gb|AAO81531.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255963566|gb|EET96042.1| phosphate ABC transporter [Enterococcus faecalis T1]
 gi|255968533|gb|EET99155.1| phosphate ABC transporter [Enterococcus faecalis T2]
 gi|256598779|gb|EEU17955.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC
           4200]
 gi|256711771|gb|EEU26809.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256949661|gb|EEU66293.1| ABC-type phosphate transport system [Enterococcus faecalis DS5]
 gi|256952236|gb|EEU68868.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96]
 gi|256955432|gb|EEU72064.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704]
 gi|256987232|gb|EEU74534.1| ABC-type phosphate transporter [Enterococcus faecalis JH1]
 gi|256990397|gb|EEU77699.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol]
 gi|256993028|gb|EEU80330.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1]
 gi|256995073|gb|EEU82375.1| ABC-type phosphate transport system [Enterococcus faecalis D6]
 gi|256998885|gb|EEU85405.1| ABC phosphate transporter permease [Enterococcus faecalis CH188]
 gi|257158107|gb|EEU88067.1| ABC-type phosphate transport system [Enterococcus faecalis ARO1/DG]
 gi|257161308|gb|EEU91268.1| ABC phosphate transporter [Enterococcus faecalis T11]
 gi|257164199|gb|EEU94159.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|294453544|gb|EFG21945.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis PC1.1]
 gi|300849720|gb|EFK77470.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TUSoD Ef11]
 gi|323480916|gb|ADX80355.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis 62]
          Length = 306

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102
           P DI  D  P+   V +LP  A    +  LSA+V +         +   S + G   L P
Sbjct: 69  PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 125

Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L
Sbjct: 126 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 184

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++    
Sbjct: 185 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 244

Query: 219 VIP 221
           V+P
Sbjct: 245 VMP 247


>gi|81428116|ref|YP_395115.1| phosphate ABC transporter transmembrane protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78609757|emb|CAI54803.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 307

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIG--AELAAIFAIFTSQV 147
           +R   +L P+++++  IP  + GF+  +VV     +++ G   G  A    +F +    V
Sbjct: 117 KRGEKILQPVMELLVGIPSVVYGFIGLSVVVPTMRHIFGGSGFGILAGTCVLFIMILPTV 176

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +MT     +L ++PR   E S +   + WQ  W + +  + PG++  ++  M+  +   
Sbjct: 177 TSMT---VDALKSVPRHYREASLALGATRWQTTWKVVLKAATPGILTGVVFGMARAFGEA 233

Query: 208 VASEMIVVGDTVIP 221
           +A +M++    ++P
Sbjct: 234 LAVQMVIGNAALMP 247


>gi|309972484|gb|ADO95685.1| Probable ABC transporter permease protein [Haemophilus influenzae
           R2846]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L + SR++  VL+PIL I Q+IP+       V++F      K++ + L   F +  
Sbjct: 74  ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                 T + Y  L N P+   +++++F +S  +    + +P ++P     + +++S   
Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
              VA    VVG+ V    G+G Y+ +    +  + +++A L +L
Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLIL 223


>gi|228991603|ref|ZP_04151547.1| Glycine betaine transport system permease protein opuAB [Bacillus
           pseudomycoides DSM 12442]
 gi|228997708|ref|ZP_04157315.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock3-17]
 gi|229009063|ref|ZP_04166402.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock1-4]
 gi|228752233|gb|EEM01922.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock1-4]
 gi|228762052|gb|EEM10991.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock3-17]
 gi|228768172|gb|EEM16791.1| Glycine betaine transport system permease protein opuAB [Bacillus
           pseudomycoides DSM 12442]
          Length = 253

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R   +L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 89  LASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 144

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 145 FTD----------LGIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIML 194

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 195 SLS-----------MVVTASLVGAPGLG 211


>gi|254456657|ref|ZP_05070086.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083659|gb|EDZ61085.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 641

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV + ++   II +P+G+++G          P  +L    P   + PL++S +    
Sbjct: 450 SFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISVLGI-- 507

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N     L+   +   ++ +  AGAS         A S   +  +  RY+I P   P 
Sbjct: 508 --DNTGKIFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRYVIFPNSLPE 565

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +TG   A G  W   + +E  +       TTG+G
Sbjct: 566 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIG 594


>gi|256762744|ref|ZP_05503324.1| phosphate ABC transporter [Enterococcus faecalis T3]
 gi|256683995|gb|EEU23690.1| phosphate ABC transporter [Enterococcus faecalis T3]
          Length = 306

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102
           P DI  D  P+   V +LP  A    +  LSA+V +         +   S + G   L P
Sbjct: 69  PSDIGTDGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 125

Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L
Sbjct: 126 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 184

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++    
Sbjct: 185 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 244

Query: 219 VIP 221
           V+P
Sbjct: 245 VMP 247


>gi|227518946|ref|ZP_03948995.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227553566|ref|ZP_03983615.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229545630|ref|ZP_04434355.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229549821|ref|ZP_04438546.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383447|ref|ZP_06629360.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis R712]
 gi|293388899|ref|ZP_06633384.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis S613]
 gi|307269570|ref|ZP_07550909.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4248]
 gi|307273032|ref|ZP_07554278.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0855]
 gi|307275781|ref|ZP_07556920.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2134]
 gi|307277878|ref|ZP_07558962.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0860]
 gi|307289297|ref|ZP_07569253.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0109]
 gi|307291804|ref|ZP_07571675.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0411]
 gi|312901837|ref|ZP_07761102.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0470]
 gi|312903507|ref|ZP_07762687.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0635]
 gi|312907724|ref|ZP_07766715.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 512]
 gi|312910342|ref|ZP_07769189.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 516]
 gi|312951688|ref|ZP_07770583.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0102]
 gi|227073635|gb|EEI11598.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177296|gb|EEI58268.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229305090|gb|EEN71086.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229309198|gb|EEN75185.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079238|gb|EFE16602.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis R712]
 gi|291081680|gb|EFE18643.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis S613]
 gi|306497070|gb|EFM66616.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0411]
 gi|306500006|gb|EFM69367.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0109]
 gi|306505275|gb|EFM74461.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0860]
 gi|306507473|gb|EFM76604.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2134]
 gi|306510017|gb|EFM79041.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0855]
 gi|306514190|gb|EFM82766.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4248]
 gi|310626752|gb|EFQ10035.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 512]
 gi|310630405|gb|EFQ13688.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0102]
 gi|310633383|gb|EFQ16666.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0635]
 gi|311289615|gb|EFQ68171.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 516]
 gi|311291030|gb|EFQ69586.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0470]
 gi|315027914|gb|EFT39846.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2137]
 gi|315031982|gb|EFT43914.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0017]
 gi|315037168|gb|EFT49100.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0027]
 gi|315144997|gb|EFT89013.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2141]
 gi|315147454|gb|EFT91470.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4244]
 gi|315149835|gb|EFT93851.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0012]
 gi|315152291|gb|EFT96307.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0031]
 gi|315156092|gb|EFU00109.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0043]
 gi|315158267|gb|EFU02284.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0312]
 gi|315162426|gb|EFU06443.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0645]
 gi|315163911|gb|EFU07928.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1302]
 gi|315167281|gb|EFU11298.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1341]
 gi|315169649|gb|EFU13666.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1342]
 gi|315174816|gb|EFU18833.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1346]
 gi|315576033|gb|EFU88224.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0309B]
 gi|315577797|gb|EFU89988.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0630]
 gi|315580608|gb|EFU92799.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0309A]
 gi|327535322|gb|AEA94156.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 313

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 45  PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102
           P DI  D  P+   V +LP  A    +  LSA+V +         +   S + G   L P
Sbjct: 76  PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 132

Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T     +L
Sbjct: 133 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 191

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++    
Sbjct: 192 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 251

Query: 219 VIP 221
           V+P
Sbjct: 252 VMP 254


>gi|218711074|ref|YP_002418694.1| putative Aliphatic sulfonates transport system permease protein
           [Escherichia coli ED1a]
 gi|218349857|emb|CAQ87258.1| putative Aliphatic sulfonates transport system permease protein
           [Escherichia coli ED1a]
          Length = 252

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++  + + I  N   G        KE+A S +++  R+   I++P   P  VTG   A 
Sbjct: 123 IIVLASVFPIFLNTRDGLRRVSTAHKELAISLNLSPLRYLLAIVIPSATPSVVTGFRLAF 182

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G +W A I +E+ +       ++GLG  I +S E      V++G+L
Sbjct: 183 GYSWRALIGAELIA------ASSGLGYLIIDSQEMMRTDAVIVGIL 222


>gi|123441275|ref|YP_001005262.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088236|emb|CAL11025.1| glycine betaine/L-proline transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 393

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 208 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 262

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 263 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 315

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340


>gi|302554989|ref|ZP_07307331.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302472607|gb|EFL35700.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 304

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 14/230 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P D+ ++V        L  Y   +  R L     +L+       L A+ + +   L PI
Sbjct: 81  APSDVWNVVQTAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAALGPI 140

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIP 162
           L  +QS+P + ++   V++         +G   + ++A I    V ++   +   +  +P
Sbjct: 141 LSGLQSLPSVAWVPPAVIW---------LGLNNSMMYAVILLGAVPSIANGLVSGVDQVP 191

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIP 221
                  R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I    D  + 
Sbjct: 192 PLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV- 250

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             G+G  +       D+  +  A+L +L V    D L+F P+  W  + R
Sbjct: 251 --GLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFSPLERWVLRNR 298



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I  P+G+ +     + + + P    L + P+  + P     V +  LN N  +  ++
Sbjct: 116 ALVIGTPLGLLVARVKVVRAALGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 171

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   +++G    P  F     +   TG +   +I+LP   P YV G       
Sbjct: 172 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 231

Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +W + + +E +AS+  + +   GLG  +           V   +L++    +A++  ++ 
Sbjct: 232 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFS 288

Query: 576 PL 577
           PL
Sbjct: 289 PL 290


>gi|254505374|ref|ZP_05117521.1| ABC transporter, membrane spanning protein [proline/glycine
           betaine] [Vibrio parahaemolyticus 16]
 gi|219551491|gb|EED28469.1| ABC transporter, membrane spanning protein [proline/glycine
           betaine] [Vibrio parahaemolyticus 16]
          Length = 299

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 29/177 (16%)

Query: 69  TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T+R LS + +  + + V         A+S R+   + P+LDIMQ++P   +L   V   M
Sbjct: 103 TMRTLSIITVCTMLSIVLGIPIGIAMARSNRVQSTVTPMLDIMQTMPAFVYLIPVV---M 159

Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            L  GK+ G     I+AI    ++ N+   +      + +++ E S +F  +  Q+ + +
Sbjct: 160 LLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGANAKQRLFGV 213

Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +P +MP    G+   +MM++S          M+V+  ++I + G+G  +  +I  Q
Sbjct: 214 QLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259


>gi|85860755|ref|YP_462957.1| sulfate transport system permease [Syntrophus aciditrophicus SB]
 gi|85723846|gb|ABC78789.1| sulfate transport system permease protein [Syntrophus
           aciditrophicus SB]
          Length = 280

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 18/159 (11%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS----- 439
           I++ RV+   ++A  + IP+GI +G+   +   +  F  L    P   + PLV++     
Sbjct: 66  ISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRLLNGFLALFRPIPPLAWVPLVLAWFGVA 125

Query: 440 ----------CVSYYHLNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFH 487
                       +Y +LN NL LS++ I   G  + +L + I G     +   + A    
Sbjct: 126 SLASMFGVEEGKAYLYLN-NLKLSMIFIIFIGAFYPVLTSAIHGVMGVRSTLLDSARVLG 184

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              W  +R I+LP   P  V G     G AW   + +E+
Sbjct: 185 AGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCLVSAEM 223


>gi|260460414|ref|ZP_05808666.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034059|gb|EEW35318.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 659

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%)

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           +++ P LD+MQ+IP   +L   ++ F N     +I        AIF +    M  +    
Sbjct: 182 LIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIAT------AIFATP--PMVRATMLG 233

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P ++++ S     +  QK W + +P + P L+  +   +      V+ + MI  G 
Sbjct: 234 LSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 292

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G  + LA++   +   + A L ++ +    D+L
Sbjct: 293 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327


>gi|312960707|ref|ZP_07775212.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311284365|gb|EFQ62941.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 273

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ S +  R+L    I      V+A     SR     L P    ++SIP L ++   +++
Sbjct: 72  KHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 131

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  K++   + A F ++ + V         ++ +I R L EV + +  S  +    
Sbjct: 132 LGIDETSKIVLIAIGAFFPVYLNGV--------AAIRDIDRKLVEVGQMYGFSRRRLVRR 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P ++PGL   +   +S  W F+VA+E+I  
Sbjct: 184 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIAA 216


>gi|307244628|ref|ZP_07526732.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492009|gb|EFM64058.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           IQP    + A P   F  L +  VS    N ++ +S L++      I  NV+ G  +  +
Sbjct: 91  IQPLMATIQAIPVVSFIILCLIWVS--SRNLSVLISFLLVLPI---IYTNVLTGIDSIDS 145

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            F ++A  F +   +  RYI L  ++P+  +    + G  W + I +EV
Sbjct: 146 SFMDLAKVFKMKRSKIIRYIYLSEVYPHLKSATYVSLGLCWKSGIAAEV 194


>gi|304392280|ref|ZP_07374222.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130]
 gi|303296509|gb|EFL90867.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130]
          Length = 278

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           PILD+MQ++P   +L   +++F + + PG V     A +  +  + +      +  +   
Sbjct: 130 PILDLMQTLPTFVYLIPAIIFFGIGMVPGLV-----ATVIFVIPAPIRLTQLGIAAT--- 181

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            P  L E   +F  S WQ    + +P+++P    GL   +M+S+S
Sbjct: 182 -PAALREAGTAFGASSWQMLRKVELPYALPQIMAGLTQTIMLSLS 225


>gi|295835830|ref|ZP_06822763.1| ABC transporter, permease [Streptomyces sp. SPB74]
 gi|295825724|gb|EFG64431.1| ABC transporter, permease [Streptomyces sp. SPB74]
          Length = 299

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 17/232 (7%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A G  W  +      +T   +L  IW    ++ R +   ++A +I  P+G+ +     + 
Sbjct: 76  APGAVWDELS---EAWTRGKLLGYIW---TSVERGLFGFVLALVIGTPLGLLVSRVRFVR 129

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + I P    L + P+  + P     V +  LN ++  +++++ G    I   +++G    
Sbjct: 130 AAIGPILSGLQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQV 185

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHL 534
           P  +     +   TG R   +I+LP   P Y+ G       +W + + +E +AS   + +
Sbjct: 186 PPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI 245

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              GLG  +       S   V L + ++    +A++  ++ PL     R LR
Sbjct: 246 ---GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 291


>gi|294648756|ref|ZP_06726214.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292825326|gb|EFF84071.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + M
Sbjct: 97  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPM 148

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP ++  +  S+   W      
Sbjct: 149 YINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 203

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    Q L R ++
Sbjct: 204 -LLIVAETISAQAGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVL--AQALERYLL 259

Query: 265 VWSNKFR 271
            W   ++
Sbjct: 260 RWHAGYQ 266


>gi|157146316|ref|YP_001453635.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895]
 gi|157083521|gb|ABV13199.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895]
          Length = 256

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ + +  R LSA  +++L       L   S  L  VL P +  ++ +P +  +   VV+
Sbjct: 60  EHVAVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAVVW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                    IG E +  F IF +   ++      ++  I R    V+++   S  Q F  
Sbjct: 120 LG-------IG-EASKFFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIFLR 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++P L   + +S+  GW  ++A+EM+
Sbjct: 172 VVLPDALPELFTTVRLSIGIGWTSLIAAEMV 202



 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A +I IP+G+ +G    +++ + PF Q L   P     PL V     
Sbjct: 63  AVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GASA  +        VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             ++LP   P   T    + G  W + I +E+ +       ++GLG
Sbjct: 170 LRVVLPDALPELFTTVRLSIGIGWTSLIAAEMVA------ASSGLG 209


>gi|150402370|ref|YP_001329664.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
 gi|150033400|gb|ABR65513.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
          Length = 253

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV++  +IA    IP+GI +G+   I+  +    +L    P   + PL    ++++
Sbjct: 59  VSIERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAWVPL---ALAWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  +  ++  G  + IL N I+G  + P    E A +   +     + +I+P   P
Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVIVPASSP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 175 DILTGLRIGAGIAWMCVVAAEM 196


>gi|328551972|gb|AEB22464.1| OpuAB [Bacillus amyloliquefaciens TA208]
 gi|328910239|gb|AEB61835.1| Glycine betaine transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ++++++IS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVVTSVLISIIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT      +  +P DL E + +F  +  Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|229135631|ref|ZP_04264409.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196]
 gi|228647811|gb|EEL03868.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196]
          Length = 167

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P ++  + P+  +L A P     P+++         PN+  S+ M  G    I+  ++  
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNISSSIAM--GVIISIIITILVI 54

Query: 472 ASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            SAF    +++ +V  +F    W+ ++++ILP  FP  ++      G +W   I      
Sbjct: 55  YSAFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVI------ 108

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +G + +   GLG  I+   +  +F  V+L V++ C
Sbjct: 109 FGELLVSKQGLGYLISYGFQVFNFTLVLLSVMLTC 143


>gi|254245525|ref|ZP_04938846.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia cenocepacia PC184]
 gi|124870301|gb|EAY62017.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia cenocepacia PC184]
          Length = 270

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L  L+  G  + +  N   G  +   +  E+
Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ + G+   R +ILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 166 AKSYGVRGFALCRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584
              + E      VV+G+L+         VLA  + R    WHP Y  G + 
Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270


>gi|308172161|ref|YP_003918866.1| glycine betaine ABC transporter permease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605025|emb|CBI41396.1| glycine betaine ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ++++++IS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVVTSVLISIIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT      +  +P DL E + +F  +  Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|213158534|ref|YP_002319832.1| aliphatic sulfonates transport permease protein [Acinetobacter
           baumannii AB0057]
 gi|213057694|gb|ACJ42596.1| aliphatic sulfonates transport permease protein [Acinetobacter
           baumannii AB0057]
          Length = 142

 Score = 40.4 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 8/84 (9%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K+    + A F  +T+ V         ++ N+ + L EV + +RL+ +Q+   + +P + 
Sbjct: 11  KITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPAAS 62

Query: 190 PGLVWNMMMSMSGGWFFVVASEMI 213
           PG++  +  S+S  W F++A+E+I
Sbjct: 63  PGILTGLRNSLSLSWMFMIAAELI 86


>gi|161524468|ref|YP_001579480.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189350777|ref|YP_001946405.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160341897|gb|ABX14983.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189334799|dbj|BAG43869.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 290

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465
           IG    +   + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL
Sbjct: 117 IGRYRALEDALLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPIL 170

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N + GA A        A S    G+  +  +ILPG  P   TG     G AW   + +E
Sbjct: 171 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 230

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           + +  +      G+G +   S    ++P++V+G+ ++
Sbjct: 231 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 261



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            + R L   L+P L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +
Sbjct: 118 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 169

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +
Sbjct: 170 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 229

Query: 211 EMIV 214
           EMI 
Sbjct: 230 EMIA 233


>gi|153011191|ref|YP_001372405.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151563079|gb|ABS16576.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 280

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +  ++ +++   +  + W+  RY++ P   PY++     A G +   ++V
Sbjct: 153 ILSNTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYFMAALKIAGGLSLIGAVV 212

Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +E VA       ++TGL + I ES+ +   P +
Sbjct: 213 AEFVAGTAG---QSTGLASRILESSFRNEIPRM 242



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A SR + M   P   I+Q  P++      ++Y  + +   +I A + A F I ++ V  +
Sbjct: 102 ALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLICAWIVAFFPILSNTVIGL 161

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + +        +L ++ R +R S WQ+  YL  P ++P   +   + ++GG   + A 
Sbjct: 162 RSADH--------NLRDLFRLYRASPWQRLRYLLAPSALP--YFMAALKIAGGLSLIGAV 211

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLG-VIFLYDQLLFRPMI-VW 266
               V  T     G+ S I  +    ++  +  A  ++++LG VIFL    L R ++  W
Sbjct: 212 VAEFVAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLGIVIFLVTSWLSRLVLGRW 271

Query: 267 -SNKFRLER 274
             ++ R ER
Sbjct: 272 HESEIRRER 280


>gi|91778720|ref|YP_553928.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91691380|gb|ABE34578.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 323

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  V            E A +      +   ++++PGI P          
Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILL 254

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI +      F  V   ++++    L  +
Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYTHFENVYAAIMMIGIIGLGTD 304


>gi|126178943|ref|YP_001046908.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
 gi|125861737|gb|ABN56926.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
          Length = 281

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 19/169 (11%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L + +++L  +      AA S  L   L PILD MQ++P   +L   V++F     G V
Sbjct: 98  VLVSTIVALAISIPLGIAAAGSDALNAALRPILDFMQTMPSFVYLIPAVIFFGI---GNV 154

Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G     +FAI  + ++ N+       +  +P +L EV+ +F  +  QK   + +P ++P
Sbjct: 155 PGTIATVVFAIPPALRLTNL------GIRQVPIELIEVADAFGSTPRQKLLKVQLPVALP 208

Query: 191 GLVWNMMMSMSG-GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +       M+G     ++A  M+V+  ++I   G+G  + + I+  D+
Sbjct: 209 TI-------MAGVNQCIMLALSMVVIA-SMIGARGLGYQVLVGIQRVDI 249


>gi|104781701|ref|YP_608199.1| glycine betaine ABC transporter permease [Pseudomonas entomophila
           L48]
 gi|95110688|emb|CAK15401.1| putative glycine betaine ABC transporter, permease protein
           [Pseudomonas entomophila L48]
          Length = 283

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML A +IS+L       L+A++ RL  VL+P+LDIMQ++P   +L   ++ F   
Sbjct: 94  QTLALMLVATLISVLVGIPLGILSARNDRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV      AIFA        +       +  +  ++ E   +F  +  Q+ + + +P
Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRLQQLFGVQLP 205

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            ++P    G+    MM++S     VV + MI
Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232


>gi|77456482|ref|YP_345987.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380485|gb|ABA71998.1| taurine ABC transport system, permease protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 279

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +PVGI IG        + P  +     P   + PL+V       L+  L L  L IF   
Sbjct: 103 VPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP- 160

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I      G           A S   T  +  R++ILP   P  +TG     G  W+  
Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSALPDILTGVRIGLGVGWSTL 218

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALIAFAME 261


>gi|37519742|ref|NP_923119.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421]
 gi|35210733|dbj|BAC88114.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421]
          Length = 283

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  ++++++ IP+G+ IG    +    +P   L    PA  F PL++  V    
Sbjct: 92  SLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEPVLGLFRYMPAAAFIPLIILWVG--- 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+    ++++ I G+ +Y    V       P D+ +V+ +        +  +ILP   P 
Sbjct: 149 LDEPAKVAIIFI-GSFFYNTLMVADAVKFVPADWLKVSYTLGAGRRDAFFRVILPATLPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +         AWN  +V+E+ +        +GLG  I  S       E+ +G+L++   
Sbjct: 208 VIDTLRINIATAWNFVVVAELVA------ANSGLGYRILVSQRFLKTDEIFVGILVIGLI 261

Query: 566 VLALN 570
            LA++
Sbjct: 262 GLAID 266


>gi|319784812|ref|YP_004144288.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170700|gb|ADV14238.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 660

 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%)

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           +++ P LD+MQ+IP   +L   ++ F N     +I        AIF +    M  +    
Sbjct: 183 LIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIAT------AIFATP--PMVRATMLG 234

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P ++++ S     +  QK W + +P + P L+  +   +      V+ + MI  G 
Sbjct: 235 LSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 293

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G  + LA++   +   + A L ++ +    D+L
Sbjct: 294 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 328


>gi|300786900|ref|YP_003767191.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299796414|gb|ADJ46789.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 272

 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 22/181 (12%)

Query: 95  RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R G  LV P + +++++P LG +   +++F      K++   L   F ++         +
Sbjct: 108 RWGEALVDPPVQMLRTLPFLGLIPLFILWFGIGEETKIVLVALGVAFPLY--------LN 159

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           ++  +      L E SRS   S  ++ W++ VP ++P  +  +  S+   W        +
Sbjct: 160 VHSGIRGADPALVEASRSLGFSRAERLWHVVVPGALPQALVGLRQSLGLAWL------AL 213

Query: 214 VVGDTVIPLPGIGSYIALAIK--EQDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +VG+TV    G+G  I  A +    D++    +LYA+L +  V     +LL R ++ W  
Sbjct: 214 IVGETVNADAGVGYLINNAREFLRTDVVVVGLVLYALLGL--VTDALVRLLERKVLRWRT 271

Query: 269 K 269
           +
Sbjct: 272 R 272


>gi|30262879|ref|NP_845256.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Ames]
 gi|47528213|ref|YP_019562.1| sulfonate ABC transporter permease protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49185718|ref|YP_028970.1| sulfonate ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|65320194|ref|ZP_00393153.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165868596|ref|ZP_02213256.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167631771|ref|ZP_02390098.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167637819|ref|ZP_02396098.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170685175|ref|ZP_02876399.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|170704724|ref|ZP_02895190.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177649373|ref|ZP_02932375.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190565673|ref|ZP_03018593.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196032678|ref|ZP_03100092.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|227814276|ref|YP_002814285.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|228927963|ref|ZP_04091008.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229604457|ref|YP_002867170.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254685477|ref|ZP_05149337.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722884|ref|ZP_05184672.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A1055]
 gi|254737934|ref|ZP_05195637.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254742893|ref|ZP_05200578.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Kruger B]
 gi|254752248|ref|ZP_05204285.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Vollum]
 gi|254760765|ref|ZP_05212789.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Australia 94]
 gi|30257512|gb|AAP26742.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Ames]
 gi|47503361|gb|AAT32037.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49179645|gb|AAT55021.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Sterne]
 gi|164715322|gb|EDR20839.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167514368|gb|EDR89735.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167532069|gb|EDR94705.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170130525|gb|EDS99386.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|170670535|gb|EDT21274.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|172084447|gb|EDT69505.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190563700|gb|EDV17665.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195995429|gb|EDX59383.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|227006521|gb|ACP16264.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|228831653|gb|EEM77245.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229268865|gb|ACQ50502.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FR      I   + I +G  +GF       + P  Q+L   P     PL V    +
Sbjct: 83  SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+  G  + +  N   G     +   +VA     +  +    +ILP   
Sbjct: 143 GETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPATL 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I  
Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252


>gi|284044215|ref|YP_003394555.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948436|gb|ADB51180.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V A +A + R LG  L  I   + S+P++      V++F      KV+ A LA+ F I  
Sbjct: 76  VIALVADRFRTLGEGLQQIALGVYSLPLIALAPVLVIWFGTGITTKVVIAALASFFPILI 135

Query: 145 SQVWNMTFSMYQSLCNIPRDLE--EVSRSFRLSGWQKFWYLGVPFSMPGL 192
               N++ ++ Q+    PR LE  E++ +   SGWQ+F  L +P+++P L
Sbjct: 136 ----NLSQALRQT---DPRTLELMEIAGA---SGWQRFTRLKLPYALPPL 175


>gi|196041697|ref|ZP_03108988.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
 gi|196027466|gb|EDX66082.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
          Length = 278

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|160882649|ref|ZP_02063652.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483]
 gi|156111964|gb|EDO13709.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483]
          Length = 398

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 16/189 (8%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           L PI++++  IP  + GF    V+        NL  G+   + LA  F +    +  +  
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLCNLPVGE---SGLAGSFVLAIMALPTIIT 268

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
               ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A  M
Sbjct: 269 VTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLM 328

Query: 213 IVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +     VI      PL  I + IA  + E       Y  L +LGV+  +  L+    + +
Sbjct: 329 VTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEY 388

Query: 267 SNKFRLERT 275
            +   L+R+
Sbjct: 389 ISSKGLKRS 397


>gi|91783657|ref|YP_558863.1| sulfate ester ABC transporter inner membrane protein [Burkholderia
           xenovorans LB400]
 gi|91687611|gb|ABE30811.1| Putative ABC sulfate ester transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 292

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A P  + EVA +F  + W+  R +ILP   P   TG   A   +W A++ +E     
Sbjct: 178 GIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 232

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  +G+G  + + +E+     V+ GV+++     ALN
Sbjct: 233 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALN 272



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 13/137 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  +        T 
Sbjct: 122 SRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPV--------TA 173

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
                +  +PR   EV+R+FR S WQ    + +P ++P +   + +++   W   + +E 
Sbjct: 174 HTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEY 233

Query: 213 IVVGDTVIPLPGIGSYI 229
           ++V  +     GIG+ +
Sbjct: 234 LLVAGS-----GIGNTL 245


>gi|302548557|ref|ZP_07300899.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces hygroscopicus ATCC
           53653]
 gi|302466175|gb|EFL29268.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces himastatinicus ATCC
           53653]
          Length = 317

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A +I +P+G+ IG    ++  + P  ++     A    P+ V  +     +    +S++
Sbjct: 134 LAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIGETS---KISIV 190

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + +   W IL N I+          ++A S  ++  R ++ +ILP   P   TG   A  
Sbjct: 191 L-YACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVPTIFTGIRLAGA 249

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            A    + +E+           GLG  I  S    + P++  G+L +    +A N+ L
Sbjct: 250 NAILVLVAAEMVGAKE------GLGYLINSSQYNFAIPQMHAGILTISVIGVAFNQLL 301


>gi|226952298|ref|ZP_03822762.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ATCC 27244]
 gi|226836964|gb|EEH69347.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ATCC 27244]
          Length = 267

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + M
Sbjct: 97  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPM 148

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP ++  +  S+   W      
Sbjct: 149 YINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 203

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    Q L R ++
Sbjct: 204 -LLIVAETISAQAGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVL--AQALERYLL 259

Query: 265 VWSNKFR 271
            W   ++
Sbjct: 260 RWHAGYQ 266


>gi|318606880|emb|CBY28378.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 393

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 208 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 262

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  +  Q  + + +P +MP    G+   +M+++S     
Sbjct: 263 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 315

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340


>gi|229046484|ref|ZP_04192139.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH676]
 gi|296503326|ref|YP_003665026.1| glycine betaine transport system permease [Bacillus thuringiensis
           BMB171]
 gi|228724846|gb|EEL76148.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH676]
 gi|296324378|gb|ADH07306.1| glycine betaine transport system permease protein [Bacillus
           thuringiensis BMB171]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184


>gi|222102208|ref|YP_002546798.1| ABC transporter component C [Agrobacterium radiobacter K84]
 gi|221728325|gb|ACM31334.1| ABC transporter component C [Agrobacterium radiobacter K84]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  V  ++IA+++ IP+GI IG  P +    +       +FP     P+ V       
Sbjct: 61  TVYDAVRGLLIAALLAIPIGILIGMFPKLEVATRMLVDFGRSFPVIALLPVFVLLFGATQ 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + + +   F     IL   I GA        +   SF I     +  ++LP   P+
Sbjct: 121 TMKVVAIGIACFFP----ILLQTIYGARNLDPTIVDTVRSFRIPPHLRFFKVLLPAAGPF 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557
             TG   A   +   ++  E+ S       T G+G  IA S      P          +L
Sbjct: 177 IATGLRIATTVSILVAVGVEIVSV------TPGIGREIALSRSYNETPTTYAYIIYAGLL 230

Query: 558 GVLIMCCFVLALNRFL-WH 575
           GV+I   + LA  R L WH
Sbjct: 231 GVVITLLWDLAEARLLHWH 249


>gi|196032371|ref|ZP_03099785.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus W]
 gi|195995122|gb|EDX59076.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus W]
          Length = 278

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|146338568|ref|YP_001203616.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191374|emb|CAL75379.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 269

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     IA+++ + +G+ IG+       I+P  Q+L   P   + PL +      +
Sbjct: 72  SLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIAN 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P ++L  L  F   + IL N I G      +     +    +  +  RYI++P   P 
Sbjct: 132 -KPAIFLVFLGAF---FPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIVVPAAMPS 187

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
              G     G AW  ++ +E+ +
Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210


>gi|229185005|ref|ZP_04312195.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BGSC 6E1]
 gi|228598480|gb|EEK56110.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BGSC 6E1]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|256379427|ref|YP_003103087.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255923730|gb|ACU39241.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 269

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 19/190 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA+++ + +G+ +G          P    + + P     P+ +     +++  ++ L+ +
Sbjct: 78  IAAVVGVALGLALGRSARAMEYAGPVLTFMRSIPPPALVPVFLLL---FNIGTSMQLATI 134

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +FG  W IL N + GA +  +   E +  F I   +W   ++LP   P    G   +  
Sbjct: 135 -VFGVLWPILLNTVDGARSVDSTKTETSEVFRIPRAQWVLGVVLPSAAPKIFAGLRVSLS 193

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-----VVLGVL--IMCCFVLA 568
            +    +VSE+    +      G+G+ +  +  +  FP      V+LGVL   +   +LA
Sbjct: 194 LSLVLMVVSELVGTDN------GIGSQLLLAQRQFDFPGMWAGIVLLGVLGYTLNTVLLA 247

Query: 569 L-NRFL-WHP 576
           L NR L W P
Sbjct: 248 LENRALAWQP 257


>gi|187919924|ref|YP_001888955.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
 gi|187718362|gb|ACD19585.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 323

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  V            E A +      +   ++++PGI P          
Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILL 254

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI +      F  V   ++++    L  +
Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYEHFDNVYAAIMMIGIIGLGTD 304


>gi|152988369|ref|YP_001347068.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963527|gb|ABR85552.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 262

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+    +
Sbjct: 62  AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  
Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S G      +G+G     + E      VVL +L+  
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISAG------SGIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 564 CF-------VLALNR--FLWHPLY 578
                       L R    WHP Y
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255


>gi|228915387|ref|ZP_04078980.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228844330|gb|EEM89388.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|169797764|ref|YP_001715557.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184156368|ref|YP_001844707.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|213155436|ref|YP_002317481.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter
           baumannii AB0057]
 gi|215485115|ref|YP_002327356.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|239503754|ref|ZP_04663064.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB900]
 gi|260557764|ref|ZP_05829978.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|301347644|ref|ZP_07228385.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB056]
 gi|301510765|ref|ZP_07236002.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB058]
 gi|301595708|ref|ZP_07240716.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB059]
 gi|332855716|ref|ZP_08436012.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332866684|ref|ZP_08437146.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|332873538|ref|ZP_08441487.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
 gi|169150691|emb|CAM88601.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183207962|gb|ACC55360.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|193075942|gb|ABO10522.2| alkanesulfonate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213054596|gb|ACJ39498.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter
           baumannii AB0057]
 gi|213988688|gb|ACJ58987.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|260408937|gb|EEX02241.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|322506238|gb|ADX01692.1| ssuC [Acinetobacter baumannii 1656-2]
 gi|323516114|gb|ADX90495.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332727302|gb|EGJ58742.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332734453|gb|EGJ65568.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|332738235|gb|EGJ69113.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
          Length = 265

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 23/186 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            SR    +L   L ++++IP L  +   +++F           E A +F +     + + 
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPIY 147

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W       
Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201

Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMIV 265
           +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R ++ 
Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLLR 258

Query: 266 WSNKFR 271
           W   ++
Sbjct: 259 WHAGYQ 264



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         VLA  L R+L  WH  Y
Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHAGY 263


>gi|116051463|ref|YP_789704.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388040|ref|ZP_06877515.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313108800|ref|ZP_07794786.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa 39016]
 gi|115586684|gb|ABJ12699.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881288|gb|EFQ39882.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa 39016]
          Length = 262

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+    +
Sbjct: 62  AISGWRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  
Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VVL +L+  
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 564 CF-------VLALNR--FLWHPLY 578
                       L R    WHP Y
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255


>gi|332637580|ref|ZP_08416443.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Weissella cibaria KACC 11862]
          Length = 262

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 17/220 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLIIIASIIW 401
             +V  VA+   W    Y+ +     +    +W          I+++R  + ++I   + 
Sbjct: 24  LIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLLIGGAVG 83

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +G+  G      +      Q++   P     PL++    ++ +     ++L+ I G  
Sbjct: 84  FVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIII---WFGIGEPAKVTLVAI-GVM 139

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + I  N + G  +      E+  S+ +T W+ +  +I PG  P  + G   A G  W   
Sbjct: 140 FPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALGVMWTTL 199

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           IVSE  S       ++G+G     + +    P + L ++I
Sbjct: 200 IVSETIS------ASSGIGYMETNAQQFLDMPTIFLAIII 233



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L Q    +  R    ++I     FV       SR    +    + ++++IP L  +   
Sbjct: 60  TLQQNMGISLYRATMGLLIGGAVGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLI 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F    P KV    +  +F I+         +    + +I   L E+ +S+RL+ WQ 
Sbjct: 120 IIWFGIGEPAKVTLVAIGVMFPIY--------INTLHGIQSIDPKLIEMGQSYRLTKWQM 171

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F  +  P +MP ++  +  ++   W  ++ SE I
Sbjct: 172 FTKVIFPGAMPTILMGLRYALGVMWTTLIVSETI 205


>gi|254719609|ref|ZP_05181420.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella sp. 83/13]
 gi|265984617|ref|ZP_06097352.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306837899|ref|ZP_07470759.1| choline ABC transporter, permease protein [Brucella sp. NF 2653]
 gi|264663209|gb|EEZ33470.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306406987|gb|EFM63206.1| choline ABC transporter, permease protein [Brucella sp. NF 2653]
          Length = 278

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           P+LD+MQ++P   +L   +V+F + + PG      LA +  +  + +      +  +   
Sbjct: 130 PVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATVIFVIPAPIRLTQLGISST--- 181

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            P  L E   +F  S  Q  W + +P++MP    GL   +M+S+S
Sbjct: 182 -PASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225


>gi|237747877|ref|ZP_04578357.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Oxalobacter formigenes OXCC13]
 gi|229379239|gb|EEO29330.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Oxalobacter formigenes OXCC13]
          Length = 250

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 22/202 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L   V+S +   V   +   SRRL +   P++ ++ ++    +  F +++F  + 
Sbjct: 59  TVRRVLLGFVLSAIVGTVIGVVFGASRRLAVFFEPVISVLNTVSSAIWAVFAIIWF-GIS 117

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +         +  + +W+ T         + R   E++RSFR++ +Q    + +P 
Sbjct: 118 DASTVTVVFMTAMPLILTNIWDAT-------RTVDRQYVELARSFRMNTFQIVRKIYIPT 170

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA---- 240
            +P       ++   GW   + +E I  G       GIG  + LA   ++   + A    
Sbjct: 171 ILPAFFSASRLAFGFGWRVSLVAETIGAGS------GIGYRLRLAADMVQSAQVFAWTVL 224

Query: 241 -ILYAMLTMLGVIFLYDQLLFR 261
            I++ +L   GVI   ++ LFR
Sbjct: 225 LIVFMVLIESGVIKPVEKWLFR 246


>gi|228985879|ref|ZP_04146027.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229156363|ref|ZP_04284458.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 4342]
 gi|228627086|gb|EEK83818.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 4342]
 gi|228773808|gb|EEM22226.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|228927837|ref|ZP_04090885.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228934061|ref|ZP_04096902.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228946395|ref|ZP_04108716.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229091790|ref|ZP_04222989.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-42]
 gi|229122332|ref|ZP_04251546.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 95/8201]
 gi|229161659|ref|ZP_04289639.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus R309803]
 gi|228621904|gb|EEK78750.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus R309803]
 gi|228661181|gb|EEL16807.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 95/8201]
 gi|228691572|gb|EEL45326.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-42]
 gi|228813258|gb|EEM59558.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228825575|gb|EEM71367.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228831900|gb|EEM77489.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|229139423|ref|ZP_04267994.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST26]
 gi|229196958|ref|ZP_04323698.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1293]
 gi|228586515|gb|EEK44593.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1293]
 gi|228643970|gb|EEL00231.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST26]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|304405669|ref|ZP_07387328.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304345708|gb|EFM11543.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 277

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A ++ IP+G+ IG+ P ++  + P  +L     A    P+ V  +     +       L
Sbjct: 94  LAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAALALLPVFVLILGIGETSK----VAL 149

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + +   W IL N I G         + A S  +   R ++ +ILP   P   TG   A  
Sbjct: 150 VFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLGSLRLFQKVILPASVPTIFTGIRLA-- 207

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GA+  SI+  VA+   +     GLG  I  +      P++  G++ +    L  N+ L
Sbjct: 208 GAY--SILVLVAA--EMVGAKAGLGYLINYTQFNFQIPQMYAGIITISILGLLFNQLL 261


>gi|159905859|ref|YP_001549521.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
 gi|159887352|gb|ABX02289.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   IA    IP+G+ +G+   I+  +    +LL   P   + PL    ++++
Sbjct: 59  ISIKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAWVPL---ALAWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  +  ++  G  + IL N I+G    P    E A +   +     + +++P   P
Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGSTKDILKSVVVPASSP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 175 DILTGLRIGAGIAWMCVVAAEM 196


>gi|119474985|ref|ZP_01615338.1| Binding-protein-dependent transport systems inner membrane
           component [marine gamma proteobacterium HTCC2143]
 gi|119451188|gb|EAW32421.1| Binding-protein-dependent transport systems inner membrane
           component [marine gamma proteobacterium HTCC2143]
          Length = 316

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 14/180 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+M R++    IA ++ + +G+ +G      + + P+ +++   PA  + PL +      
Sbjct: 123 ISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAI------ 176

Query: 445 HLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            + P    S++ I   G  + I+ N I G    P      A S        + +++LP  
Sbjct: 177 LMWPTEESSIVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAA 236

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G     G +W + +  E+ S  +      G+G +  ++    ++P++V+G+LI+
Sbjct: 237 LPSIAAGLSIGMGISWFSLLAGEIISGQY------GIGYFTWDAYSMINYPDIVVGMLII 290



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/143 (18%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L A  I+++       L  +SR     ++P +++++ IP + ++   ++    ++P +
Sbjct: 127 RILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAIL----MWPTE 182

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + ++  F   ++ +  +    +   P  L   + S      + FW++ +P ++P
Sbjct: 183 ----ESSIVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAALP 238

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   + + M   WF ++A E+I
Sbjct: 239 SIAAGLSIGMGISWFSLLAGEII 261


>gi|116696161|ref|YP_841737.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530660|emb|CAJ97007.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 265

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 8/145 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L+   I      V+ T    SR    ++ P    ++ I +  ++    V+F      K
Sbjct: 72  RDLAGFAIGASAGLVFGTALGLSRLFERMVGPSFHTVKQISLFAWIPLISVWFGLGDAAK 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+   LAA F +          + ++ +  +P DL EV+R  R S  Q  W + +P + P
Sbjct: 132 VVFLSLAAFFPV--------VLNTFEGIRAVPADLLEVARVLRFSRTQVLWRVVLPSAAP 183

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215
            +   + + +   W   + +E ++V
Sbjct: 184 SIFAGIHLGLIYAWLATLGAEYLLV 208


>gi|228959019|ref|ZP_04120720.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229128128|ref|ZP_04257110.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-Cer4]
 gi|229145361|ref|ZP_04273750.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST24]
 gi|228638200|gb|EEK94641.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST24]
 gi|228655403|gb|EEL11259.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-Cer4]
 gi|228800680|gb|EEM47596.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 196

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 33  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 86

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 87  --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 141

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 142 ---------MVVTASLVGAPGLG 155


>gi|227113085|ref|ZP_03826741.1| putative aliphatic sulfonates transport permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 264

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 13/121 (10%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F  + +P ++P ++ 
Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248
            +  ++   W        ++V +T+    GIG Y+A+  +E    D++    ILYA+L  
Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236

Query: 249 L 249
           L
Sbjct: 237 L 237


>gi|261407407|ref|YP_003243648.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261283870|gb|ACX65841.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +RV++     S++ IPVGI IG    I    +PF   +   P   F  L +      
Sbjct: 59  ISSYRVLLGWTFGSLLAIPVGIMIGKVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+++ T + ++ N + G  +   D    A S   + W+   ++++P   P
Sbjct: 119 ETSK----IMLILYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
           +  TG   A G ++ A I +E+
Sbjct: 175 FMFTGIRLAMGTSFMAIIGAEM 196


>gi|329926378|ref|ZP_08280854.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328939299|gb|EGG35659.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 12/160 (7%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+GF       + P  Q+L   P     PL +    +   +      LL+  G+ + + 
Sbjct: 108 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 163

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G  +  N   +VA     + W   R +I+P   P+   G   + G AW   +V+E
Sbjct: 164 VNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIRLSIGVAWLGLVVAE 223

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCC 564
           +         ++G+G YI       S+  VV +G+L+   
Sbjct: 224 LMG------SSSGIG-YIINDARSFSWTTVVFVGILVFAL 256


>gi|229097301|ref|ZP_04228263.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-29]
 gi|229103389|ref|ZP_04234071.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-28]
 gi|229116297|ref|ZP_04245687.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-3]
 gi|228667129|gb|EEL22581.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-3]
 gi|228679885|gb|EEL34080.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-28]
 gi|228686112|gb|EEL40028.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-29]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 171 ---------MVVTASLVGAPGLG 184


>gi|134102844|ref|YP_001108505.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915467|emb|CAM05580.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 224

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + M+++P LG +T  V+ F           E  A+  +    V  +    Y  + N P D
Sbjct: 65  NAMRALPTLGVVTLLVLSFGL--------GEAPALAGLVILAVPAIVSGTYAGITNAPPD 116

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190
             + +R   ++ WQ+ W + +P ++P
Sbjct: 117 AVDAARGMGMTSWQRLWQVELPNALP 142


>gi|125975285|ref|YP_001039195.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256003055|ref|ZP_05428047.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281419275|ref|ZP_06250291.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125715510|gb|ABN54002.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255992746|gb|EEU02836.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281407141|gb|EFB37403.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316939448|gb|ADU73482.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R  +  + A +  I +G+ +G+   + S I+P  Q+L       +FP +V    ++
Sbjct: 62  VSLARFFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVL---WF 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +     + ++ I G  + IL + ++G       + +VA SF I   +    IILP  FP
Sbjct: 119 GIGDTPAIVIIFIAGF-FPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A G AW   +  E+          +GLG  I ++        V+ G++ +  
Sbjct: 178 LIANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGA 231

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 232 LGLLLDRLI 240


>gi|307322586|ref|ZP_07601926.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306891759|gb|EFN22605.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 207

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 18/156 (11%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +W   ++++RV+V   +A++I +P+G+ +G      S ++P+       PA  F PL+V 
Sbjct: 8   VWDIAVSIYRVLVGFCLAALIAVPIGLIMGSVQFFRSLLEPWLAFTRYMPATAFIPLLV- 66

Query: 440 CVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                     LWL +       ++  GT + +   V+A     P    E A       W+
Sbjct: 67  ----------LWLGIDDTQKFSVIFVGTFFTLALMVMASTLTVPVALIEAAIMLGAKPWQ 116

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               +ILP   P          G AW   +++E+ +
Sbjct: 117 LIFDVILPAAKPAIFNDLRIVLGWAWTYIVIAEIVA 152


>gi|284009253|emb|CBA76363.1| glycine betaine/L-proline ABC transporter, permease protein
           [Arsenophonus nasoniae]
          Length = 308

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 23/152 (15%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    +  +
Sbjct: 118 ANSKPASQIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGIVVTIIFAL--PPIIRL 172

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +P DL E + SF  S  Q  + + +P + P    G+   +M+S+S     
Sbjct: 173 TI---LGIRQVPDDLIEAAESFGASRNQLLFKVQLPLAAPTIMAGVNQTLMLSLS----M 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           VV + MI VG       G+G  +   I   D+
Sbjct: 226 VVIASMIAVG-------GLGQMVLRGIGRLDM 250


>gi|326793665|ref|YP_004311485.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326544429|gb|ADZ89649.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 263

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 15/163 (9%)

Query: 68  TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TLR+ L    +S+L     +    +S  L   L P L ++QS P++      +V     
Sbjct: 69  ATLRVALMGFALSILIAIPLSIGMIRSELLNRTLYPALIVIQSTPVVAVAPLIIVLLGTD 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P +V+   L   F +  S    M           P ++ E+S+S R   +++ W + +P
Sbjct: 129 DPSRVLITCLITFFPLVVSTTTGM--------LETPPEMIELSQSLRAPRYRETWQIRIP 180

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +++P +   + +S++      V +E +          G+G +I
Sbjct: 181 YAIPHIFSGLRVSITLAIIGAVVAEFVAAEK------GLGYFI 217


>gi|325971774|ref|YP_004247965.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027012|gb|ADY13771.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 262

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 27/217 (12%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           ++V   P T +V S       T +R L + +I +    V    A +   L + L P + +
Sbjct: 46  ELVRQKPFTTNVFS-------TVVRALESFLIIVASATVIGIAAGRYPLLSLALKPFVTV 98

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +++IP++  +    ++F +   G V       +F+ F      M   +   +    R L+
Sbjct: 99  LKAIPVMSIILLAFIWFTS---GTV------PLFSAFLMGFPVMYVQIEGGVRQKDRLLD 149

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E+ R + + G  K  +  +P  +P  V     ++S  W  V+A+E++ V     P  G+G
Sbjct: 150 EMCRLYDIHGKDKLIHYTIPSLLPFFVIGSRATLSMVWKVVIAAEVLTV-----PRFGVG 204

Query: 227 SYIALA---IKEQDLLA--ILYAMLTMLGVIFLYDQL 258
           S + LA   ++   +L+  ++  +LT LG + L+D L
Sbjct: 205 SRMQLAQVQLQTDQVLSWTLIAILLTALGDL-LFDSL 240


>gi|295400736|ref|ZP_06810713.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977317|gb|EFG52918.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFP 476
           + P+  LL+  P  +F P  ++ +  +        S+ +IF GT W+I    + G     
Sbjct: 92  LMPYVHLLSPLPPTLFVPYAIAVLPTFE-----SASIFLIFIGTFWHIFLGTLHGVLIIE 146

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             + + A +  + G      +I+P   P+ ++GA    G A   S +  + +   +    
Sbjct: 147 KQYLDNAKTLGLKGNDLLFKVIIPAASPHILSGA----GSALTMSFL--ILTMAEMFGAK 200

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G+G +I   T+   +  V+ G++     +L
Sbjct: 201 SGMGYFIQYYTDFAQYDYVIAGIIFNSAVIL 231


>gi|291008764|ref|ZP_06566737.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 237

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + M+++P LG +T  V+ F           E  A+  +    V  +    Y  + N P D
Sbjct: 78  NAMRALPTLGVVTLLVLSFGL--------GEAPALAGLVILAVPAIVSGTYAGITNAPPD 129

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190
             + +R   ++ WQ+ W + +P ++P
Sbjct: 130 AVDAARGMGMTSWQRLWQVELPNALP 155


>gi|256831080|ref|YP_003159808.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
 gi|256580256|gb|ACU91392.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
          Length = 278

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 22/131 (16%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA S+    V++PILD+MQ++P   +L   + +F            L    AIF++ +++
Sbjct: 115 AAISKGTYRVVMPILDVMQTMPAFVYLIPAIPFF-----------GLGKTAAIFSTVIFS 163

Query: 150 MTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           M  ++      +  IP +L E S +F  +  Q+ + L +P + P    G+   +M+++S 
Sbjct: 164 MPPAIRFTCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQTVMLALS- 222

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 223 ---MVVIASMI 230


>gi|116695803|ref|YP_841379.1| ABC-type sulfonate transporter, permease component [Ralstonia
           eutropha H16]
 gi|113530302|emb|CAJ96649.1| ABC-type sulfonate transporter, permease component [Ralstonia
           eutropha H16]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F + Y         AA+F I  +  + +  
Sbjct: 183 SRRIGYWVHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 234

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  +  + +   +V+R+   SGW     + +P ++P +   + M +   +  +V +EM
Sbjct: 235 LTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 294

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y+  A      +  +YA L ++ ++F
Sbjct: 295 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 328


>gi|87120682|ref|ZP_01076575.1| putative permease [Marinomonas sp. MED121]
 gi|86163910|gb|EAQ65182.1| putative permease [Marinomonas sp. MED121]
          Length = 299

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 19/194 (9%)

Query: 69  TLRMLSAMVISLLFTF----VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T+R LS + +  L +         L ++S R   ++ PILD+MQ++P   +L   V   M
Sbjct: 103 TMRTLSIITVCTLLSIGIGIPTGILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVV---M 159

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L  GK+ G     I+A+    V  +T ++   L N  ++  E + +F  +  Q+ + + 
Sbjct: 160 LLGIGKIPGVIAVIIYAV--PPVIRLT-NLGIRLVN--KETLEAATAFGATAKQRLFGIQ 214

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q     L+ 
Sbjct: 215 LPLAMPTIMAGINQTIMMALAMVVVASMIGV-------KGLGQPVLKSITNQYFTLGLFN 267

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  ++D++
Sbjct: 268 GLAIVALAIIFDRV 281


>gi|330812461|ref|YP_004356923.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380569|gb|AEA71919.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 260

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+L   P     PLV+    ++ ++ +  +  L+  GT + I  N   G         E+
Sbjct: 98  QMLRNIPHLALIPLVIL---WFGIDESAKI-FLVALGTLFPIYLNTYHGIRNVDPALVEM 153

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S+ ++G R +R +ILPG  P  + G   A G  W   IV+E  S       ++G+G  
Sbjct: 154 SRSYGLSGLRLFRQVILPGALPSILVGVRFALGFMWLTLIVAETIS------ASSGIGYL 207

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLY 578
              + E      VVL +L+              L R    WHP Y
Sbjct: 208 AMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAY 252



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + ++++IP L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 97  VQMLRNIPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 148

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG + F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 149 ALVEMSRSYGLSGLRLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 202

Query: 224 GIGSYIALAIKE 235
           GIG Y+A+  +E
Sbjct: 203 GIG-YLAMNARE 213


>gi|228901325|ref|ZP_04065518.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 4222]
 gi|228908530|ref|ZP_04072370.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 200]
 gi|228921455|ref|ZP_04084778.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228965723|ref|ZP_04126803.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228793982|gb|EEM41505.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228838228|gb|EEM83546.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228851083|gb|EEM95897.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 200]
 gi|228858303|gb|EEN02770.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 4222]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184


>gi|228939906|ref|ZP_04102483.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228972797|ref|ZP_04133396.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228979380|ref|ZP_04139716.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis Bt407]
 gi|229070264|ref|ZP_04203514.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus F65185]
 gi|229150997|ref|ZP_04279208.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1550]
 gi|229173436|ref|ZP_04300980.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus MM3]
 gi|229179071|ref|ZP_04306428.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 172560W]
 gi|228604439|gb|EEK61903.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 172560W]
 gi|228610130|gb|EEK67408.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus MM3]
 gi|228632557|gb|EEK89175.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1550]
 gi|228712828|gb|EEL64753.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus F65185]
 gi|228780384|gb|EEM28615.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis Bt407]
 gi|228787012|gb|EEM34992.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819837|gb|EEM65885.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184


>gi|152977144|ref|YP_001376661.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025896|gb|ABS23666.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 268

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           IIA+I+W     WI   P ++  + P+  +L A P     P+++         PN+  S+
Sbjct: 94  IIATILW-----WI---PLVARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNITSSI 140

Query: 455 LMIFGTQWYILFNVIAGASAFPN---DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            M  G    I+  ++   SAF     ++ +V  +F    W+ ++ +ILP  FP  ++   
Sbjct: 141 AM--GVIISIIITILVIYSAFQEVDANYIKVMHTFGANKWQTYQQVILPASFPTIISTLK 198

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G +W   I      +G + +   GLG  I+   +  +F  ++L VL+ C  
Sbjct: 199 VNVGLSWVGVI------FGELLVSKQGLGYLISYGFQVFNFTLILLSVLLTCVL 246


>gi|262368226|ref|ZP_06061555.1| taurine transport system permease tauC [Acinetobacter johnsonii
           SH046]
 gi|262315904|gb|EEY96942.1| taurine transport system permease tauC [Acinetobacter johnsonii
           SH046]
          Length = 314

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 15/180 (8%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IAS++ IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 IASLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRGLIEAGYTLGTNKAKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMCCFVLALN 570
            AW   IVSE+         TTG+  +I +     +F  V     ++GV+ + C V+ + 
Sbjct: 248 WAWTYLIVSELIG------TTTGITWFITQQARYQNFDNVYAAILIIGVIGLVCDVILMK 301


>gi|153832168|ref|ZP_01984835.1| inner membrane protein [Vibrio harveyi HY01]
 gi|156977775|ref|YP_001448681.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           harveyi ATCC BAA-1116]
 gi|148871479|gb|EDL70334.1| inner membrane protein [Vibrio harveyi HY01]
 gi|156529369|gb|ABU74454.1| hypothetical protein VIBHAR_06563 [Vibrio harveyi ATCC BAA-1116]
          Length = 299

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  V+ P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNRVQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+   + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|71903592|ref|YP_280395.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|71802687|gb|AAX72040.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 95  LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 153

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 154 TDSLRAVPRHYREASMAMGATCWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 213

Query: 215 VGDTVIP 221
               V+P
Sbjct: 214 GNSAVMP 220


>gi|163760515|ref|ZP_02167596.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
 gi|162282130|gb|EDQ32420.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
          Length = 273

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+ +GF P++ S + PF   ++  P     P++   V     +  L ++L    GT   
Sbjct: 96  VGVLVGFLPYVRSTLSPFIASISLIPPITILPILFIMVGLGETSKILLIAL----GTAPV 151

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  +V       P +    A +   + W+    ++LP + P  +T        AW   I 
Sbjct: 152 MTRSVAQAVMDLPKELIIKAQTLGASTWQMMTRVVLPQVLPNLITAMRLGLVPAWIFLIS 211

Query: 524 SEVASWGHIHLRTTGLG 540
           +E  +       T+GLG
Sbjct: 212 AEAIA------STSGLG 222



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 41/79 (51%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + I  I       MT S+ Q++ ++P++L   +++   S WQ    + +P  +P L+ 
Sbjct: 137 ETSKILLIALGTAPVMTRSVAQAVMDLPKELIIKAQTLGASTWQMMTRVVLPQVLPNLIT 196

Query: 195 NMMMSMSGGWFFVVASEMI 213
            M + +   W F++++E I
Sbjct: 197 AMRLGLVPAWIFLISAEAI 215


>gi|327440575|dbj|BAK16940.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 270

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I     I L    LP +   +  R++   ++  L   +       S+    ++ P L
Sbjct: 54  PLKIASTFWILLANGELPVHFLASGQRVIFGFLLGALTAIILGIATGFSKIAQQLIDPSL 113

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +++++P+L  +   +++F     GKV+   L A F ++ +        ++  +  + + 
Sbjct: 114 QMLRTVPLLSLIPLFILWFGVGEFGKVLMIALGAFFPVYVN--------IFLGIRLVDQK 165

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           L EV+   + S  +K   L  P +MP L+  + ++M   W  +V SEM+
Sbjct: 166 LYEVTGILQYSFKEKLTKLIFPSAMPNLLLGLRLAMGTSWLVLVVSEMM 214


>gi|330806952|ref|YP_004351414.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375060|gb|AEA66410.1| Taurine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 279

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A +  +PVGI IG        + P  +     P   + PL+V       
Sbjct: 87  SLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   T  +  R++I+P   P 
Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDRAKLRAAQSLGATRAQLIRHVIVPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALI 256

Query: 566 VLALN 570
             A+ 
Sbjct: 257 AFAME 261


>gi|310640756|ref|YP_003945514.1| glycine betaine abc transporter permease protein [Paenibacillus
           polymyxa SC2]
 gi|309245706|gb|ADO55273.1| Glycine betaine ABC transporter permease protein [Paenibacillus
           polymyxa SC2]
          Length = 864

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 30/181 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI-FTSQVW 148
           A S+    ++ P+LD MQ++P   +L   V +F + + PG +     + IFAI  T ++ 
Sbjct: 114 AYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVI----ASVIFAIPPTIRMT 169

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
           N+       +  +  +L E S +F  +  QK + + +P ++P    G+   +M+S+S   
Sbjct: 170 NL------GIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLS--- 220

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
                  M+V+  ++I   GIG+ +  A+ +  +     A L ++ +  + D   Q LF+
Sbjct: 221 -------MVVIA-SMIGAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNLFK 272

Query: 262 P 262
           P
Sbjct: 273 P 273


>gi|229060460|ref|ZP_04197823.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH603]
 gi|229133674|ref|ZP_04262500.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST196]
 gi|228649709|gb|EEL05718.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST196]
 gi|228718843|gb|EEL70464.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH603]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 62  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184


>gi|50084691|ref|YP_046201.1| ABC transporter permease [Acinetobacter sp. ADP1]
 gi|49530667|emb|CAG68379.1| putative permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 279

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  + E+   + +    W R IILP I P  + G   A G AW   +  E+ + G     
Sbjct: 171 PKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIALGRAWLILVAVELLAAG----- 225

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            TG+G  +    +      V++GV I       L++ L
Sbjct: 226 -TGIGQMMELGRQMLRLDVVMVGVFITGVVGFGLDKVL 262


>gi|325964279|ref|YP_004242185.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470366|gb|ADX74051.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 315

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 27/240 (11%)

Query: 50  DIVPITLDV---------HSLPQYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           D+VP  LDV             Q A  T+L R L   VIS+        L A+   L   
Sbjct: 86  DLVPGPLDVATQMGVLWNEGKLQEAVWTSLQRGLVGFVISVTIATPVGLLLAQVAPLRRA 145

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
             P++  +Q +P + ++   +++F         G   A + F IF   + ++   +   +
Sbjct: 146 FGPLISGLQVLPSVAWVPAAIIWF---------GLTDATVYFVIFMGAIPSIINGLISGV 196

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             IP     V      S  +    + +P ++PG +  +    +  W  ++A+E+I VG T
Sbjct: 197 DQIPPQYRRVGTVLGASRLEMALQIILPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGT 256

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
           +    G+GS +       D+  ++ A+L +L V  L + L+F P+     + RL R+ G+
Sbjct: 257 IG--FGLGSLLDQGRILSDMTVVMSAILLILAVGILIELLVFAPI-----EKRLLRSRGL 309


>gi|289705654|ref|ZP_06502039.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557602|gb|EFD50908.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 307

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L  +  +P + ++   V++F          ++  A F + T  V  +   +      +
Sbjct: 140 PLLTALMVLPNVAWVPLAVLWFGL--------SDATAYFVMLTGAVPAVVAGLTTGTDQV 191

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L   +R    S  +    + +P ++P  V  +    +  W  ++A+E+I VG    P
Sbjct: 192 PPQLRRAARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEIIAVGG---P 248

Query: 222 LP-GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +  G+G+ +     E DL  +L A+LT+L V  L +   F P+
Sbjct: 249 MGVGLGTLLHQGRAESDLAVVLCAVLTILAVGVLVELTAFGPV 291


>gi|91216934|ref|ZP_01253897.1| integral membrane components of other binding-protein-dependent
           transport system [Psychroflexus torquis ATCC 700755]
 gi|91184805|gb|EAS71185.1| integral membrane components of other binding-protein-dependent
           transport system [Psychroflexus torquis ATCC 700755]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 32/166 (19%), Positives = 75/166 (45%), Gaps = 11/166 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A ++ IP+G+ +     ++S  +P+   +   P     PL    + ++ ++    + L
Sbjct: 70  LLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPL---TILFFGIDETSKIVL 126

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L I GT +  +  VI      P ++ ++A S + + W  ++ + L  + P     +  + 
Sbjct: 127 LFI-GTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWDLYK-MKLKVVLPEIYDNSRISI 184

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  W   +++E+ +         G+G  I E+    +  +V +G+L
Sbjct: 185 GICWTYLVIAELVAAQE------GIGHMIKEAQRFSNTADVYIGIL 224



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 21/183 (11%)

Query: 79  SLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG- 133
           S L  FV A     L ++S+ L  +  P +D ++ +P+   +  T+++F         G 
Sbjct: 68  SFLLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPLTILFF---------GI 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + I  +F    +     +  +L NIP++  +++ S   S W   + + +   +P + 
Sbjct: 119 DETSKIVLLFIGTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWD-LYKMKLKVVLPEIY 177

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            N  +S+   W ++V +E++   +      GIG  I  A +  +   +   +LT+  V +
Sbjct: 178 DNSRISIGICWTYLVIAELVAAQE------GIGHMIKEAQRFSNTADVYIGILTIGLVGY 231

Query: 254 LYD 256
           L D
Sbjct: 232 LTD 234


>gi|34495715|ref|NP_899930.1| sugar ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34101570|gb|AAQ57939.1| probable ABC transporter sugar permease [Chromobacterium violaceum
           ATCC 12472]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           L +   +++S L  +  A +    RRL  G +L  ++   +   ++ F+T + +   + Y
Sbjct: 93  LTVAGTLLVSALAAYPLARMKFPGRRLVFGAILATMILPSEVNFLVNFITVSKLQLTDSY 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V+   LA    IF          + Q+   +P+DL + +R    S WQ FW + +P 
Sbjct: 153 SGVVL-PTLAGAVGIFL---------LKQAFEAVPQDLIDAARVDGASEWQIFWRIMLPL 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L    +++    W   +   +++      PL     Y+A A   +  +    A+LT
Sbjct: 203 ARPALAALTILTTVSAWNQYIWPSIVMSSPDKFPLSVGVLYLAGAFSFKTRVVAAGAVLT 262

Query: 248 MLG--VIFLYDQLLF 260
           +L   ++FL+ Q  F
Sbjct: 263 VLPILIVFLFTQRYF 277


>gi|301155785|emb|CBW15253.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 15/160 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           ++  +L+P+L I Q+IP+       V++     P K++ A L   F +        T + 
Sbjct: 84  KISSLLLPVLVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYFPV--------TAAC 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           Y  L N P+   +++++F+ S W+    + +P ++P       +++S      VA    V
Sbjct: 136 YDGLRNTPKAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVS------VAPIGAV 189

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +G+ V    G+G Y+ +    +  + +++A L +L  I L
Sbjct: 190 IGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISL 228


>gi|289623910|ref|ZP_06456864.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651131|ref|ZP_06482474.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330868938|gb|EGH03647.1| taurine ABC transporter permease [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S G+++    Y D      LG  ++ R+ + +  A +  IP+GI IG          P  
Sbjct: 77  SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V        +  + L  L IF     I      G           
Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFS-KVLLIYLAIFAP---IAIATATGVRTVDPTKVRA 191

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T W+  R+++LP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFV 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +  + +      VVLG+L++     A+ 
Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273


>gi|169826967|ref|YP_001697125.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           sphaericus C3-41]
 gi|168991455|gb|ACA38995.1| Putative aliphatic sulfonates transport permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 264

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 14/183 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
           +T+   V+  I  +++   + I + + P +S  + P+  +L A P     P+++  +   
Sbjct: 74  VTLMETVIGFIAGTLLGTLIAILLWWSPFLSKVLDPYLVILNAMPKVALGPILIVALGPG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y+ +     L  ++I     Y  F  +      PN + +V  +F  T W+ +R +ILP  
Sbjct: 134 YFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGATRWQIFREVILPAS 187

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  ++      G +W   IV      G   + + GLG  I    +  +F  V++ +LI+
Sbjct: 188 FPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLII 241

Query: 563 CCF 565
             F
Sbjct: 242 AFF 244


>gi|148254724|ref|YP_001239309.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146406897|gb|ABQ35403.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 78/206 (37%), Gaps = 19/206 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R      I   I   +G+ +GF     + I    Q++ A P     PLV+  +   
Sbjct: 90  VSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALIDRSIQMIRAIPFLAVLPLVIVWLGVG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + I  N   G         E+A    ++     R IILPG  P
Sbjct: 150 EAEK----VFLVALGVTFPIYINTTLGIRQVDPKLIELARVQGLSPLALIRRIILPGALP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A   AW A +V+E           +GLG    ++ E      +VL ++I   
Sbjct: 206 SILTGVRYALATAWLALVVAETIG------AQSGLGFLAMDAREFLRTDVIVLTIVIYAL 259

Query: 565 F-VLA------LNRFL--WHPLYLYG 581
             VLA      L R L  WHP Y  G
Sbjct: 260 IGVLADLIARWLERRLLAWHPNYGAG 285


>gi|254560148|ref|YP_003067243.1| taurine ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254267426|emb|CAX23265.1| ABC transporter, permease component; putative taurine transporter
           [Methylobacterium extorquens DM4]
          Length = 256

 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P + + + P  Q+L   P   + PL +        +       L+  G  + IL N
Sbjct: 86  IGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLGGTSAFF----LVFLGAFYPILVN 141

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  +      E A+    TG   +  ++LP   P   TG     G AW   +V E+ 
Sbjct: 142 TVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 201

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVV---LGVLIMCCFV 566
                    TGLGA I E+ +  S  E+V   +GV+ +  FV
Sbjct: 202 G------VQTGLGAVIMEARQL-SRTEIVICGMGVIGVAGFV 236


>gi|253995480|ref|YP_003047544.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
 gi|253982159|gb|ACT47017.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 17/180 (9%)

Query: 73  LSAMVISLL----FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L   VI LL    F  +   L A S     ++ P+   ++ +P+LG +    ++F N   
Sbjct: 68  LQTTVIGLLIGGFFGLMVGGLMAVSPFANKLIGPLYHTLRQVPLLGLIPLIALWFGNDLF 127

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K++   LAA + I          + ++ +  I R   EV+   + +  Q   ++ +P +
Sbjct: 128 SKILIVSLAAFYPI--------VLNTFEGMRGIERKYVEVASVLKFNRLQLLVHVLLPAA 179

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++   M +++  W   V SE++         PG+G  + +A +   +  ++ A++++
Sbjct: 180 TPSIMTGFMHALAFAWVSTVGSELLFSTG-----PGVGGLMLMAQESSRMDIVIVAVVSI 234


>gi|89894101|ref|YP_517588.1| hypothetical protein DSY1355 [Desulfitobacterium hafniense Y51]
 gi|89333549|dbj|BAE83144.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 11/192 (5%)

Query: 380 IWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W  C I++ R +    +   + IP+G+ IG+       + P  Q+    P     P+ V
Sbjct: 58  LWKHCSISLMRSLSGFTLGMFVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFV 117

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +     ++++++G  W  L N IAG         + A S  +   R +  ++
Sbjct: 118 MFFGIGEFSK----TMVILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVV 173

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY   G   +       SI+  +A+   +   + GLG  +         PE+   
Sbjct: 174 LPASLPYIFAGMRISA----TVSILILIAA--EMMGASKGLGYALFFYQSNFKIPEMYAV 227

Query: 559 VLIMCCFVLALN 570
           +++M  F + LN
Sbjct: 228 LIVMAVFGVTLN 239


>gi|311069899|ref|YP_003974822.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
 gi|310870416|gb|ADP33891.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
          Length = 217

 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 8/116 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+++ +L       + A+ ++    ++ I++I+Q++P L  L F   +   L  GKV   
Sbjct: 29  AVILGILVAVPLGVVLARMKKGAGTIIGIVNIVQTLPSLAILAF---FIPLLGVGKV--- 82

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              AI A+F   V  +  + Y  +  + ++L E  +   ++GW++   + +P ++P
Sbjct: 83  --PAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIGMTGWEQIRLVELPLAVP 136


>gi|153838468|ref|ZP_01991135.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810]
 gi|260902296|ref|ZP_05910691.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|149748144|gb|EDM59003.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810]
 gi|308110544|gb|EFO48084.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
          Length = 266

 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYSIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L  +     F  D+LL +  I W NK
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266


>gi|169629328|ref|YP_001702977.1| putative nitrate ABC transporter, permease protein [Mycobacterium
           abscessus ATCC 19977]
 gi|169241295|emb|CAM62323.1| Putative nitrate ABC transporter, permease protein [Mycobacterium
           abscessus]
          Length = 292

 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFVYATL 89
           N +  G++  T+P  + +IV          QY     ++T+R+L+   ++ +   +    
Sbjct: 59  NKVRFGLRFDTLP-TVTEIVAALTKRIGTEQYWLDLGQSTIRILTGFGLAAVLGVITGIW 117

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             +S     +  P+ ++ + IP +  +   ++ F +   G V    LAA F I       
Sbjct: 118 LGRSPLFANIFGPLTELARPIPAIAIVPVAILLFPSDEAGIVFITFLAAYFPIM------ 171

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              S   ++  +P   EE  R+   S W     + +P S+PG+   + + +   W  VV+
Sbjct: 172 --VSTRHAVRALPTLWEESVRTLGGSRWDVLLRVVLPGSLPGVFGGLSVGIGVAWICVVS 229

Query: 210 SEMI 213
           +EMI
Sbjct: 230 AEMI 233


>gi|329955883|ref|ZP_08296686.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           clarus YIT 12056]
 gi|328525263|gb|EGF52313.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           clarus YIT 12056]
          Length = 423

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 22/202 (10%)

Query: 75  AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTV-------VYF 123
           A++I+L F    A   ++    ++  ++ P+++++  IP  + GF    V       V+ 
Sbjct: 213 AILIALPFGLAVAVYMSEVADHKIRNLMKPVIELLSGIPSVVYGFFGLIVIVPLLQRVFD 272

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + +    + G+ + AI A+ T  +  +T     ++ N PR + E S +   S WQ  + +
Sbjct: 273 LPVGESGLAGSIVLAIMALPT--IITVT---EDAMRNCPRAMREASLALGASQWQTIYKV 327

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQD 237
            +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E  
Sbjct: 328 VIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHSILEPLRTIPATIAAELGEAP 387

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
                Y  L +LGV+  +  LL
Sbjct: 388 AGGAHYEALFLLGVVLFFISLL 409


>gi|317048194|ref|YP_004115842.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949811|gb|ADU69286.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 215

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      T+  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGIATIVLTIPTIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            N+P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 ENLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|258542054|ref|YP_003187487.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633132|dbj|BAH99107.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636189|dbj|BAI02158.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639244|dbj|BAI05206.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642298|dbj|BAI08253.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645353|dbj|BAI11301.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648408|dbj|BAI14349.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256651461|dbj|BAI17395.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654452|dbj|BAI20379.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 254

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 19/158 (12%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L  I+ +++ +P L ++ F +++F     G        A F I  S  W   ++ + ++
Sbjct: 96  LLEGIVRLLRPVPGLAWVPFAILWFGLNTSG--------ATFVIAISVFWINFYAAHSAV 147

Query: 159 CNIPRDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
             +  +L E++ +F   G+  + + + +P + PGL+  +   +  GW  VVA+E+  V  
Sbjct: 148 RGVDPELYELAAAFGHGGFFGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-- 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                PGIG+ +   ++   LLA    ++ ML +  LY
Sbjct: 206 -----PGIGARM---MQASSLLATDVVVVYMLTMALLY 235


>gi|239834160|ref|ZP_04682488.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822223|gb|EEQ93792.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 280

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +  ++ +++   +  + W+  RY++ P   PY++     A G +   ++V
Sbjct: 153 ILSNTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYFMAALKIAGGLSLIGAVV 212

Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +E VA       ++TGL + I ES+ +   P +
Sbjct: 213 AEFVAGTAG---QSTGLASRILESSFRNEIPRM 242



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A SR + M   P   I+Q  P++      ++Y  + +   +I A + A F I ++ V  +
Sbjct: 102 ALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLICAWIVAFFPILSNTVIGL 161

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + +        +L ++ R +R S WQ+  YL  P ++P   +   + ++GG   + A 
Sbjct: 162 RSADH--------NLRDLFRLYRASPWQRLRYLLAPSALP--YFMAALKIAGGLSLIGAV 211

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLG-VIFLYDQLLFRPMI-VW 266
               V  T     G+ S I  +    ++  +  A  ++++LG VIFL    L R ++  W
Sbjct: 212 VAEFVAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLGIVIFLVTSWLSRLVLGRW 271

Query: 267 -SNKFRLER 274
             ++ R ER
Sbjct: 272 HESEIRRER 280


>gi|154684792|ref|YP_001419953.1| OpuAB [Bacillus amyloliquefaciens FZB42]
 gi|154350643|gb|ABS72722.1| OpuAB [Bacillus amyloliquefaciens FZB42]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ++++++IS++        A++   +  ++ PILD+MQ++P   +L    ++F N+
Sbjct: 92  QTLALVVTSVLISIIIGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G   + IFA+       MT      +  +P DL E + +F  +  Q+ + + +P
Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +   ++  +  S+      ++A  M+V+   ++  PG+GS +  A+ +
Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|302876301|ref|YP_003844934.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|307687036|ref|ZP_07629482.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|302579158|gb|ADL53170.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
          Length = 275

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 12/188 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RVV   +I++++ I  G+ +G    +          +   P   + PL+V     
Sbjct: 82  TISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAWIPLIVLWFGI 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +++I  + + IL N ++G         EV + ++++ W+ +R I  P   
Sbjct: 142 GELSK----IIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLSRWKKFRKIYFPSAL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIM 562
           P    G     G +W A + +E+ +       ++G+G Y          PEVV +G++++
Sbjct: 198 PSIFVGLKLGLGISWMAVVGAEIIA------ASSGIG-YRMNDARSLMQPEVVFVGMIVI 250

Query: 563 CCFVLALN 570
               L ++
Sbjct: 251 ALIGLIMD 258


>gi|229012044|ref|ZP_04169223.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides DSM 2048]
 gi|229167388|ref|ZP_04295126.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH621]
 gi|228615950|gb|EEK73037.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH621]
 gi|228749132|gb|EEL98978.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides DSM 2048]
          Length = 226

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 63  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 118

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 119 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 168

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 169 SLS-----------MVVTASLVGAPGLG 185


>gi|251795829|ref|YP_003010560.1| phosphate ABC transporter inner membrane protein PstA
           [Paenibacillus sp. JDR-2]
 gi|247543455|gb|ACT00474.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus sp. JDR-2]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 25/173 (14%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF-------R 411
           ++ +G+I  HF       +   G I   +F  + L+++  II +P+GI  G         
Sbjct: 34  FRGLGHISWHFLTSPPETIRKGGGIGPQLFNSLFLLVLTMIITVPLGIGAGIYMSEYAKA 93

Query: 412 PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV- 468
             I+S I+   ++L++FP+ +   F L+V    +     NL  SLL   G     +FN+ 
Sbjct: 94  GKITSAIRLVVEVLSSFPSIIVGLFGLLVIVNKF-----NLGFSLLS--GAIALTIFNLP 146

Query: 469 ------IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                   G  + P   KE + +  I+ W+  R + LP   P  ++G+I A G
Sbjct: 147 LMVRITEQGLRSVPLQQKEASLALGISKWKTIRSVQLPIALPIVLSGSILAAG 199


>gi|159046711|ref|YP_001542379.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157914470|gb|ABV95898.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A I+ IP GI +G  P     +QP+   + + P  V   +V   V ++ +     L  L
Sbjct: 72  LAVIVGIPFGIAMGALPRFGDILQPYLYAIFSTPRVV---VVPLIVVWFGIGFEARL-FL 127

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + F +   I  N   G      D  EVA SF  +  +  R++++PG  P+ V+G      
Sbjct: 128 VFFWSMIAISVNTAQGVRHARPDLVEVAHSFQASRLQMARHVLIPGAIPFVVSGLRIGAE 187

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAE-STE 548
            A    I+      G + L+  GLG  I + STE
Sbjct: 188 RAIVGVII------GEMFLQIVGLGGVITKGSTE 215


>gi|50083329|ref|YP_044839.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49529305|emb|CAG67017.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 266

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   L ++++IP L  +   +++F           E A +F +     + M
Sbjct: 96  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DESAKLFLVAVGVFFPM 147

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP ++  +  S+   W      
Sbjct: 148 YINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 202

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264
            +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    Q L R ++
Sbjct: 203 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQALERYLL 258

Query: 265 VWSNKFR 271
            W   ++
Sbjct: 259 RWHAGYQ 265



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++ +  L L+ + G  + +  N   G  +      E+
Sbjct: 110 QMIRNIPALALIPLVIL---WFGIDESAKLFLVAV-GVFFPMYINTYHGIRSVDPQLIEM 165

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S         G+G  
Sbjct: 166 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQAGIGYM 219

Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578
              + E      V++G+L+             AL R+L  WH  Y
Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADVLAQALERYLLRWHAGY 264


>gi|121602958|ref|YP_980287.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120591927|gb|ABM35366.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  RVV    +++++ IP+G+ IG    + + ++P    +   PA  F PLV+  V   
Sbjct: 67  ISTMRVVTGWALSALLAIPLGLLIGSWRAVQALLEPLTDFIRYMPAVAFIPLVMLWVG-- 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    ++++ I GT + ++  V       P    E A +   T       +ILP   P
Sbjct: 125 -IDEGAKVAIIFI-GTFFQMVLMVAEDVRRVPMAQIEAAQTMGATRREVLEKVILPSAKP 182

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +       G AW   +V+E+ +        +GLG  I ++       ++  G+L++  
Sbjct: 183 ALLDTLRITMGWAWTYLVVAELVA------ANSGLGFAILKAQRFLQTDKIFAGILLIGF 236

Query: 565 FVLALNRF 572
             LA+++ 
Sbjct: 237 IGLAIDQL 244


>gi|320197196|gb|EFW71813.1| Taurine transport system permease protein TauC [Escherichia coli
           WV_060327]
          Length = 275

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAALSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235


>gi|297586981|ref|ZP_06945626.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Finegoldia magna ATCC 53516]
 gi|297574962|gb|EFH93681.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Finegoldia magna ATCC 53516]
          Length = 341

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I +I+ +  GI  G+   ++  I PF +LL   P   + PLV+   +         ++L 
Sbjct: 159 IGAILGLITGILCGYSKKVNYWISPFMKLLGPIPTTTWLPLVMVLATSLFYGSVFIIAL- 217

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              G  + +  + I G         E A +   TG +    I +P   P    G      
Sbjct: 218 ---GVWYAVTISTITGILNVDKSNYEAAKTLGATGNQLITKIAIPSAMPNIFGGLTIGMS 274

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A  A +++E+          +GLG YI        +  +   ++I+C   +A+N
Sbjct: 275 SACTALLIAEMLG------VESGLGWYITWKKSWAEYASMYGAIIIICLTFIAVN 323



 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 67  RTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +++L++L S   I  +   +   L   S+++   + P + ++  IP   +L   +V   +
Sbjct: 147 KSSLKLLFSGYFIGAILGLITGILCGYSKKVNYWISPFMKLLGPIPTTTWLPLVMVLATS 206

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+ G V    L   +A+        T S    + N+ +   E +++   +G Q    + +
Sbjct: 207 LFYGSVFIIALGVWYAV--------TISTITGILNVDKSNYEAAKTLGATGNQLITKIAI 258

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           P +MP +   + + MS     ++ +EM+ V        G+G YI
Sbjct: 259 PSAMPNIFGGLTIGMSSACTALLIAEMLGVES------GLGWYI 296


>gi|229018099|ref|ZP_04174974.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1273]
 gi|229024280|ref|ZP_04180739.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1272]
 gi|228737055|gb|EEL87591.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1272]
 gi|228743190|gb|EEL93315.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1273]
          Length = 252

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+     
Sbjct: 89  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 144

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198
           FT             +  +P DL E + +F  +  QK + + +P +    M G+  ++M+
Sbjct: 145 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 194

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           S+S           +VV  +++  PG+G
Sbjct: 195 SLS-----------MVVTASLVGAPGLG 211


>gi|288574363|ref|ZP_06392720.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570104|gb|EFC91661.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 283

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++++++ISLL       + A+  R    + P+LD MQ++P   +L   +++F        
Sbjct: 99  IITSVLISLLLGIPLGVMTAEFPRGTAFMKPLLDGMQTMPSFVYLIPAMMFF-------- 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
               L  + A+F + +++M   +  +   L  +P+  +E + ++  + WQ    + +P +
Sbjct: 151 ---GLGKVPAVFATLIYSMPPVIRLTTLGLRQVPKPAQEAAIAYGATRWQLLKEVRLPLA 207

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           MPG++  +  +       ++A  M+VV   +I   G+G  + L+I   D+
Sbjct: 208 MPGIMAGINQTT------MMALAMVVV-CAMIGARGLGQEVLLSINRIDI 250


>gi|261407642|ref|YP_003243883.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284105|gb|ACX66076.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 289

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 12/160 (7%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+GF       + P  Q+L   P     PL +    +   +      LL+  G+ + + 
Sbjct: 112 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 167

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G  +  N   +VA     + W   R +I+P   P+   G   + G AW   +V+E
Sbjct: 168 VNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIRLSIGVAWLGLVVAE 227

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCC 564
           +         ++G+G YI       S+  VV +G+L+   
Sbjct: 228 LMG------SSSGIG-YIINDARSFSWTTVVFVGILVFAL 260


>gi|86358510|ref|YP_470402.1| spermidine/putrescine ABC transporter permease [Rhizobium etli CFN
           42]
 gi|86282612|gb|ABC91675.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 304

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 137 IIRMISWIPVLGRNGLVNSALIKMGIIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 196

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 197 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 248

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 249 VQVMSGGQSASVALMMKNQ 267


>gi|70733776|ref|YP_257416.1| taurine ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348075|gb|AAY95681.1| taurine ABC transporter, permease protein [Pseudomonas fluorescens
           Pf-5]
          Length = 279

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +  A +  IPVGI IG        + P  +     P   + PL+V       
Sbjct: 87  SLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGE 146

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  L L  L IF     I      G           A S   T  +  R++ILP   P 
Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSALPD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++   
Sbjct: 203 ILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALI 256

Query: 566 VLALN 570
             A+ 
Sbjct: 257 AFAME 261


>gi|329113703|ref|ZP_08242478.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696966|gb|EGE48632.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 320

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S+I +P+G+  G  P ++  I+P        PA  F  L V+ +  Y   P +    
Sbjct: 137 VISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD-APKI---A 192

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  +            E A +    G R    +++PGI P          
Sbjct: 193 IIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPDLYRDQRILL 252

Query: 515 GGAWNASIVSEV 526
           G AW   IV+E+
Sbjct: 253 GWAWTYLIVAEL 264


>gi|325970411|ref|YP_004246602.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025649|gb|ADY12408.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 270

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 10/165 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++   +A I  IPV   +G+ P + + ++P+ Q L   P     PLV+  +  
Sbjct: 80  SISLQRVLIGFGLAFICSIPVSFLMGWYPTVRNLVEPWIQFLRTIPPIALIPLVILAMGL 139

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +P   +  +  F     ++  +  G           A +F  +    +  I++P  F
Sbjct: 140 GE-SPKYTIIFVAAF---LVMVVTIYQGVKEVDKTLIRAAYTFGASDKDLFFDIVIPASF 195

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           PY + GA      +    I +E+         T GLGA I  + +
Sbjct: 196 PYILVGARLGMAASLTTLIAAELTG------TTFGLGARIQGAQQ 234


>gi|160943035|ref|ZP_02090273.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445729|gb|EDP22732.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii
           M21/2]
          Length = 256

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  QL+ A P   F  L +  V    L+  + +S LM+    +  +   IAGA     
Sbjct: 92  LAPVMQLVKATPVASFIILALVWVRGSALS--VLISFLMVLPVLYGAVRTGIAGADV--- 146

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E+A+ F +   R  R I LP + P +  G   A G  W + + +EV    +  +   
Sbjct: 147 QLLEMAAVFRLPPGRRLRSIWLPAVLPAFRQGCSVALGICWKSGVAAEVIGLPNGSIGDA 206

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
              A I  ST +    +F  ++L       F+LAL++ +   L   GT+C
Sbjct: 207 LYRAKITLSTGELFAWTFVIILLSAGFEKLFLLALDKAVGAVLGEEGTKC 256


>gi|157362974|ref|YP_001469741.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga lettingae TMO]
 gi|157313578|gb|ABV32677.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga lettingae TMO]
          Length = 274

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAA--------KSRRL--GMVLVPILDIMQSIPILGFL 116
           R  L  L    I ++F  V A+LAA        K + L   ++L+P+L  MQ   I+ F+
Sbjct: 69  RYFLNTLIITAIGVVFQVVLASLAAYPLARLEWKGKDLIFKLILLPMLIPMQGALIVNFI 128

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           T   +   + Y G V+   ++ IF IF          M Q   ++P+++E+ +R    + 
Sbjct: 129 TIIKMGLYDSYFGVVLPGAVS-IFGIFL---------MRQQYFSVPKEIEDAARIDGCNE 178

Query: 177 WQKFWYLGVPFSMPG 191
           +Q FW +  P   PG
Sbjct: 179 FQVFWKITFPLVRPG 193


>gi|29346733|ref|NP_810236.1| putative ABC transporter permease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338630|gb|AAO76430.1| putative ABC transporter permease protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 398

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150
           L PI++++  IP  + GF    VV      F +L  G+  + G+ + AI A+ T  +  +
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVVVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A 
Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326

Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            M+     VI      PL  I + IA  + E       Y  L +LGV+  +  L+
Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLI 381


>gi|13472447|ref|NP_104014.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14023193|dbj|BAB49800.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
          Length = 277

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 25/174 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   ++  +++P+LD+MQ++P   +L   +  F +   PG ++      IF I T+   
Sbjct: 115 AAHKPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 170

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
                 +  + ++P+ + E   +F  +  Q  W + +P ++P    GL  ++M+S+S   
Sbjct: 171 T-----HLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + +I  G       G+G+ I  A+  + +   L A L ++ +  + D++
Sbjct: 223 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 268


>gi|322411866|gb|EFY02774.1| putative phosphate ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 311

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|297539397|ref|YP_003675166.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
 gi|297258744|gb|ADI30589.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
          Length = 321

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 4/131 (3%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I +P+GI  G    +S   +PF +     PA  F  L V+ +  Y   P +    +
Sbjct: 137 ISSLIGVPIGILCGTYSAVSRLNEPFIEFFRYLPAPAFGALAVAILGIYD-GPKI---AI 192

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ GT +  +  +            E A +   + ++   ++I+PGI P          G
Sbjct: 193 IVIGTLFQQILIIANTTRKLDYSLLEAALTLGTSKFKLMMHVIIPGILPELYRDQRILLG 252

Query: 516 GAWNASIVSEV 526
            AW   IV+E+
Sbjct: 253 WAWTYLIVAEL 263


>gi|294101047|ref|YP_003552905.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
 gi|293616027|gb|ADE56181.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
          Length = 283

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++++ +SLL       L A+++ +  ++ PILD MQ++P   +L   +++F     GKV 
Sbjct: 100 IASVFLSLLIGIPVGILMAEAKGVEPIVKPILDAMQTMPSFVYLIPAMMFF---GLGKV- 155

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
                A+ A     +  +       L  +P+  +E + ++  + WQ    + VP +MP  
Sbjct: 156 ----PAVLATLIYSLPPVIRLTNLGLKQVPQPAQEAAIAYGATKWQLLKEVRVPLAMPTI 211

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+    MM++S          M+VV  ++I   G+G  + L+I   D+
Sbjct: 212 MAGVNQTTMMALS----------MVVVA-SMIGARGLGQEVLLSINRIDV 250


>gi|238025063|ref|YP_002909295.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237879728|gb|ACR32060.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 238

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + +I  ++P L  L   +  F        IG E  AI A+F + +  +T + Y+ + N+P
Sbjct: 82  VFNIGNTVPSLAVLAIALGIFG-------IG-EAPAIVALFLASLLPITRNAYEGMRNVP 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             L E +R   ++ WQ    + +P ++P
Sbjct: 134 AALREAARGIGMTPWQSLVRVELPNALP 161


>gi|119899803|ref|YP_935016.1| putative aliphatic sulfonates transport systempermease [Azoarcus
           sp. BH72]
 gi|119672216|emb|CAL96130.1| putative aliphatic sulfonates transport system,permease protein
           [Azoarcus sp. BH72]
          Length = 257

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 19/211 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +A++T L  ++   I+++F          S  +   L P+L    SIP + F+   VV+
Sbjct: 56  MHATQTFLTTMAGFGIAVVFGLALGAAVGSSPVVYKALYPLLVGFNSIPKVAFVPVLVVW 115

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F        IG  + AI   F    + +  ++   L  +  +LE+V RS   S       
Sbjct: 116 FG-------IG-TIPAILTAFLISFFPVVVNVATGLATLEPELEDVLRSLGASRLDILKK 167

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +G+P +MP    ++ ++++  +   V SE      TV    GIG Y+ +A      +A++
Sbjct: 168 VGLPRAMPYFFASLKVAITLAFVGSVISE------TVASNLGIG-YLMMAASSAMDMALV 220

Query: 243 YAMLTMLGV--IFLYDQLLF--RPMIVWSNK 269
           +A L ++GV  + +Y+   F  R +  W+++
Sbjct: 221 FAGLIVIGVMGVVMYELFAFVERRLTGWAHR 251


>gi|56808144|ref|ZP_00365928.1| COG0573: ABC-type phosphate transport system, permease component
           [Streptococcus pyogenes M49 591]
 gi|209559509|ref|YP_002285981.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes NZ131]
 gi|209540710|gb|ACI61286.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes NZ131]
          Length = 311

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|15598639|ref|NP_252133.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107102977|ref|ZP_01366895.1| hypothetical protein PaerPA_01004046 [Pseudomonas aeruginosa PACS2]
 gi|218890357|ref|YP_002439221.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236397|ref|ZP_04929720.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719]
 gi|254242129|ref|ZP_04935451.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192]
 gi|9949584|gb|AAG06831.1|AE004765_4 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126168328|gb|EAZ53839.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719]
 gi|126195507|gb|EAZ59570.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192]
 gi|218770580|emb|CAW26345.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 262

 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+    +
Sbjct: 62  AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  
Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VVL +L+  
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 564 CF-------VLALNR--FLWHPLY 578
                       L R    WHP Y
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255


>gi|294668518|ref|ZP_06733615.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309481|gb|EFE50724.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 505

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF +     
Sbjct: 42  ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 96

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               Y  L  I + +++   +F LS WQ  W + +P ++P ++
Sbjct: 97  ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 136


>gi|317127949|ref|YP_004094231.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472897|gb|ADU29500.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 276

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 21/183 (11%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+ L   L PIL  +Q IP++      V++F      KV+ A L + F I  + V     
Sbjct: 103 SKYLANSLYPILIGIQCIPMVSIAPILVIWFGYGLTTKVLLACLISFFPIVINAVVG--- 159

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +++L    +D+  + RS  +S W+ F+YL +P ++P L     + ++     VV +  
Sbjct: 160 --FRAL---DKDMHNLGRSIGISEWKIFYYLRLPNALPHLFGGFKVGIT---LAVVGA-- 209

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI----FLYDQLLFRPMIVW-- 266
            +VG+ V    G+G Y+ L    +    +++A L  L +I    F    L+ R M+ W  
Sbjct: 210 -IVGEFVASERGLG-YLQLTANARLDTTLVFATLFALAIIGMLLFGIVHLIERMMMPWYH 267

Query: 267 SNK 269
           +NK
Sbjct: 268 ANK 270



 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 8/140 (5%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+ I I +  ++++ + P    +   P     P++V    Y  L   + L+ L+ F
Sbjct: 91  VIGIPLAISIVYSKYLANSLYPILIGIQCIPMVSIAPILVIWFGY-GLTTKVLLACLISF 149

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY----YVTGAITAC 514
              + I+ N + G  A   D   +  S  I+ W+ + Y+ LP   P+    +  G   A 
Sbjct: 150 ---FPIVINAVVGFRALDKDMHNLGRSIGISEWKIFYYLRLPNALPHLFGGFKVGITLAV 206

Query: 515 GGAWNASIVSEVASWGHIHL 534
            GA     V+     G++ L
Sbjct: 207 VGAIVGEFVASERGLGYLQL 226


>gi|167590155|ref|ZP_02382543.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 88  TLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           T  A S R+G  L+ +L  M   +P +  L   +++F  L  G ++       F +  + 
Sbjct: 117 TSVAVSTRIGRDLLSMLTSMFNPLPSIALLPIALLWF-GLGTGSLL-------FVLVHAV 168

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +W +  +MY     +P  L    R++ L+G ++   + VP ++P ++  + +  +  W  
Sbjct: 169 LWPLALNMYTGFLGVPATLRMAGRNYGLTGLRQVALILVPAALPSILAGLRVGWAFAWRT 228

Query: 207 VVASEMI 213
           ++A+E++
Sbjct: 229 LIAAELV 235


>gi|163731450|ref|ZP_02138897.1| glycine betaine transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161394904|gb|EDQ19226.1| glycine betaine transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 344

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S  L  ++VPILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 176 SRSNTLQRIVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      +  D+ E + +F ++  QK W + +P ++P    G+   +MMS++     
Sbjct: 235 GIRL------VDPDVIEAADAFGMTKHQKLWGVQLPLALPNIMAGVNQTIMMSLA----- 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309


>gi|332523506|ref|ZP_08399758.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314770|gb|EGJ27755.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 311

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 6/167 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116
           +LP  +    + +LSA+V +         +   S + G  L+ P ++++  IP  + GF+
Sbjct: 84  ALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              V+  +   ++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVIVPFIRTIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMP 249


>gi|327440082|dbj|BAK16447.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 256

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 73/165 (44%), Gaps = 10/165 (6%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G++ G        + P+   L+  P  +F P V++ +  +       +SL+ I G  W +
Sbjct: 80  GLFFGLNKRSREILMPYFHALSPIPPTLFIPYVIAILPTFQ---TASMSLIFI-GAFWPV 135

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
               I G       + + A S  + G  +   ++LP   P+ ++GA T+ G ++    ++
Sbjct: 136 FLGTIHGVLLIEKHYLDNAKSLGLKGPTFLLKVVLPASAPHILSGASTSLGMSFLILTIA 195

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           E+         ++G+G +I   ++   +  V+ G++     ++A+
Sbjct: 196 EMFG------ASSGMGFFIQYYSDFSQYHYVLAGIIFNSIIIVAI 234


>gi|303326087|ref|ZP_07356530.1| putative nitrate ABC transporter, permease protein [Desulfovibrio
           sp. 3_1_syn3]
 gi|302864003|gb|EFL86934.1| putative nitrate ABC transporter, permease protein [Desulfovibrio
           sp. 3_1_syn3]
          Length = 259

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AE + IF  F      M  + Y  +  +   L + +RSF  S  Q+F+ + VP  MP + 
Sbjct: 125 AEGSKIFICFVGAFVIMILNSYTGMRYVDPLLIDAARSFGASRSQQFFNVAVPACMPSIF 184

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTV 219
             +  S+S  W  V+A+EM+   + V
Sbjct: 185 AGVQNSLSMAWMCVLAAEMVGAREGV 210


>gi|312195385|ref|YP_004015446.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311226721|gb|ADP79576.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 341

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 5/63 (7%)

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           M+ M  GW  ++ S ++V  +TV  LPG+G+Y+  A+  QD+ A+L  +L ++GV+F+  
Sbjct: 262 MLGMQFGW--MIGSALLV--ETVFGLPGVGTYLNQAVLSQDIFAVLGGVL-IIGVVFIVS 316

Query: 257 QLL 259
            L+
Sbjct: 317 SLI 319


>gi|134100948|ref|YP_001106609.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133913571|emb|CAM03684.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   +IA  I +P+G+ IG+   +S  + P  +L     A    P+ V  +    
Sbjct: 55  SLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGE 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L++F   W IL N I+G         + A S     +  +  ++LP + P 
Sbjct: 115 TSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPT 170

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +    + +E+A          GLG  I  S      P++  G++ +   
Sbjct: 171 VFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLL 224

Query: 566 VLALNRFL 573
            L  N+ L
Sbjct: 225 GLGFNQAL 232


>gi|255523879|ref|ZP_05390843.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185930|ref|ZP_06854335.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255512441|gb|EET88717.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049198|gb|EFG88627.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV+ G  A   +  E+AS + +      + I LP I  Y V+G +   G  W  S+ SEV
Sbjct: 137 NVLEGIKAVDKNLIEMASVYKVKNKYIIKDIYLPYIKHYIVSGVLMCLGMGWKVSVASEV 196

Query: 527 ASWGHIHLRTTGLGAYIAEST 547
            S   I   + GL    A+ST
Sbjct: 197 LS---IPKYSIGLNLLNAKST 214


>gi|108802310|ref|YP_642507.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871463|ref|YP_941415.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126438292|ref|YP_001073983.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772729|gb|ABG11451.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697552|gb|ABL94625.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126238092|gb|ABO01493.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P +   + P  +   A P+    P     +  + ++P + +  L+  G  W +L +
Sbjct: 89  IGQLPIVEKTVSPTLEFARAIPSTALIPF---AMMLFGVSPEMKI-FLIALGCVWPVLLS 144

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              GA    +       +F+ITG +   Y++LP + P  + G
Sbjct: 145 TADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVLPRVLVG 186


>gi|330508590|ref|YP_004385018.1| ABC transporter permease [Methanosaeta concilii GP-6]
 gi|328929398|gb|AEB69200.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
          Length = 240

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           + L  +  PI++I++ IP L ++ F +++F             AA F IF   V+ +  +
Sbjct: 70  KFLDSIFDPIVEILRPIPPLAWIPFAIIWFGI--------TNTAAGFIIFIGAVFPILTN 121

Query: 154 MYQSLCNIPRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            Y    ++PR   E ++    +       Y+ +P+S+P +   + ++M   W  +VA+EM
Sbjct: 122 TYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIAWMCLVAAEM 181



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +P+G+ +G+   + S   P  ++L   P   + P     + ++ +  N     ++  
Sbjct: 57  LIALPIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPF---AIIWFGIT-NTAAGFIIFI 112

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTGAITACGGA 517
           G  + IL N   G  + P  + E A     T      RY+ LP   P    G   A G A
Sbjct: 113 GAVFPILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIA 172

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           W   + +E+       +   GLG  I +S       EV + ++++    LA++R
Sbjct: 173 WMCLVAAEM-----FGVSKNGLGFKIWDSYGHYRMDEVFMYMIVLGLLGLAIDR 221


>gi|304386236|ref|ZP_07368569.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304327593|gb|EFL94820.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 304

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 91  AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQ 146
           A  RR G+ L  +++++  IP  + GF+  TVV     +++ G   G  LA    +    
Sbjct: 113 ANKRRRGL-LQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGI-LAGALVLLVMI 170

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +T     SL  +PR   E S +   + WQ    + V  S+PGL+  ++  M+  +  
Sbjct: 171 LPTVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGE 230

Query: 207 VVASEMIVVGDTVIP 221
            +A +M++    V+P
Sbjct: 231 ALAVQMVIGNAAVLP 245


>gi|251782472|ref|YP_002996774.1| phosphate transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391101|dbj|BAH81560.1| phosphate transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323127360|gb|ADX24657.1| putative phosphate ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|228953120|ref|ZP_04115179.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229079976|ref|ZP_04212507.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock4-2]
 gi|229110236|ref|ZP_04239810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-15]
 gi|229190884|ref|ZP_04317875.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 10876]
 gi|228592552|gb|EEK50380.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 10876]
 gi|228673222|gb|EEL28492.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-15]
 gi|228703355|gb|EEL55810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock4-2]
 gi|228806535|gb|EEM53095.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 187

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           LA+++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 24  LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 77

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 78  --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 132

Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226
                    +VV  +++  PG+G
Sbjct: 133 ---------MVVTASLVGAPGLG 146


>gi|307155016|ref|YP_003890400.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306985244|gb|ADN17125.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 286

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 24/140 (17%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-- 454
           ++I+ +P+G+ IG    +   ++P   L+   PA  F PLV+           LW+ L  
Sbjct: 105 SAILGVPIGLLIGTFKTMEGLLEPILGLMRYMPAAAFIPLVI-----------LWVGLDE 153

Query: 455 -----LMIFGTQWYILFNVIAGASA---FPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                ++  GT +Y   NV+  A A    P+D  +V+ +   T    +  +I P   P  
Sbjct: 154 PAKVTIIFLGTFFY---NVLMTADAVKFVPSDLIKVSYTLGATEKDIFFKVIFPATLPSI 210

Query: 507 VTGAITACGGAWNASIVSEV 526
           +         AWN  IV+E+
Sbjct: 211 IDTLRINIASAWNFVIVAEL 230


>gi|190892647|ref|YP_001979189.1| spermidine/putrescine ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190697926|gb|ACE92011.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
          Length = 301

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 134 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 193

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 194 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 245

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 246 VQVMSGGQSASVALMMKNQ 264


>gi|298487238|ref|ZP_07005287.1| inner membrane component of a binding-protein-dependent transport
           system [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298158262|gb|EFH99333.1| inner membrane component of a binding-protein-dependent transport
           system [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 277

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 17/188 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR     L P    ++SIP L ++   +++       KV+   + A F ++ + V     
Sbjct: 103 SREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV----- 157

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
               ++  I R L EV + +  S ++    + +P ++PGL   +   MS  W F+VA+E+
Sbjct: 158 ---AAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAEL 214

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
           I          G+G  ++   +      +L A++ +  +  L D LL    +  + W + 
Sbjct: 215 IAATK------GLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDT 268

Query: 270 FRLERTTG 277
           F  +   G
Sbjct: 269 FTGQSREG 276


>gi|325673723|ref|ZP_08153414.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
 gi|325555744|gb|EGD25415.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
          Length = 272

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 12/173 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ +G    +   ++    L+   P   + PL +  + Y   +     ++ +IF   
Sbjct: 96  IPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGYGDRS-----TIFLIFVAA 150

Query: 462 WY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           ++ IL N   G +  P    E A+       +    I++P       +G   A G +W  
Sbjct: 151 FFPILLNTTVGVAQVPQRLLEAAAMLGTPKAKTLYKIVIPSAMQSITSGLRIALGLSWVV 210

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +V E          +TGLGA I ++ +      ++ G++ +       +RF+
Sbjct: 211 LVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIGLAGFVTDRFM 257


>gi|227874222|ref|ZP_03992422.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227839930|gb|EEJ50360.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 231

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV+ + L  + A     +  M  +   S   +P+DL +V R+  LS  + FW + +P S 
Sbjct: 93  KVVQSFLGCVLAATVISLPLMYRNAKASFALVPKDLVQVGRTLGLSETKIFWKIILPLSG 152

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           PG++   ++S +       A+ M+  G+       I   IAL +++QD
Sbjct: 153 PGILSGAVLSFARALGEYGATSML-AGNIPGKTATISQRIALVMQDQD 199


>gi|153808289|ref|ZP_01960957.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185]
 gi|149129192|gb|EDM20408.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185]
          Length = 398

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L PI++++  IP  + GF    V+      L+   V  + LA    +    +  +     
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A  M+  
Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331

Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              VI      PL  I + IA  + E       Y  L MLGV+  +  L+    + + + 
Sbjct: 332 NAAVIPTTILEPLRTIPAIIAAELGEAPAGGPHYQALFMLGVVLFFITLIINFSVEYISS 391

Query: 270 FRLERT 275
             L+R+
Sbjct: 392 KGLKRS 397


>gi|108760412|ref|YP_628319.1| putative aliphatic sulfonates ABC transporter permease [Myxococcus
           xanthus DK 1622]
 gi|108464292|gb|ABF89477.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Myxococcus xanthus DK 1622]
          Length = 253

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 34/186 (18%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ I   P   + ++P    L A P+  + PL +           LW  L     T 
Sbjct: 74  VPLGLLISRIPFFRNAVKPVVMGLQALPSICWLPLAL-----------LWFGL-----TD 117

Query: 462 WYILFNVIAGA------------SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             ILF V+ G+            +        VAS+  + G R+   ++LP   P  VTG
Sbjct: 118 GAILFVVVMGSVLGIAIATEDSVNGVDPQLTRVASTLGVRGLRFQFGVLLPAALPGIVTG 177

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  AW A +       G +   + GLG  +    E    P+V+  ++ +     A+
Sbjct: 178 LKLGWSFAWRALLA------GELLFVSGGLGQLLTVGRELMDVPQVMAVMVAIVIIGTAV 231

Query: 570 NRFLWH 575
           +R L+ 
Sbjct: 232 DRVLFQ 237


>gi|94994500|ref|YP_602598.1| phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10750]
 gi|139473687|ref|YP_001128403.1| phosphate ABC transporter permease [Streptococcus pyogenes str.
           Manfredo]
 gi|94548008|gb|ABF38054.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10750]
 gi|134271934|emb|CAM30172.1| putative phosphate ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|307729436|ref|YP_003906660.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583971|gb|ADN57369.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 280

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 34/67 (50%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T S  Q   N+P  L E SR F  + WQ+  ++ +P ++P L   + ++ +  W  +V  
Sbjct: 162 TLSTLQGFRNVPVTLIEASRVFGYTRWQRIVHVVLPCAVPTLATGVRLAFTKAWLALVVV 221

Query: 211 EMIVVGD 217
           E++   +
Sbjct: 222 ELVASSE 228


>gi|270290711|ref|ZP_06196935.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici
           7_4]
 gi|270280771|gb|EFA26605.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici
           7_4]
          Length = 304

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 91  AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQ 146
           A  RR G+ L  +++++  IP  + GF+  TVV     +++ G   G  LA    +    
Sbjct: 113 ANKRRRGL-LQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGI-LAGALVLLVMI 170

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +T     SL  +PR   E S +   + WQ    + V  S+PGL+  ++  M+  +  
Sbjct: 171 LPTVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGE 230

Query: 207 VVASEMIVVGDTVIP 221
            +A +M++    V+P
Sbjct: 231 ALAVQMVIGNAAVLP 245


>gi|222110194|ref|YP_002552458.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
 gi|221729638|gb|ACM32458.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
          Length = 400

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 29/175 (16%)

Query: 73  LSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ ++ SLLF  V       + A S R      P+LD MQ+ P   +L   V+ F     
Sbjct: 177 LALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI--- 233

Query: 129 GKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G  +  +FA+    ++ N+       L  +  DL E SR++  S  Q  W + +P 
Sbjct: 234 GNVPGVIVTIVFALPPLVRLTNL------GLRQVRPDLIEASRAYGASPLQLLWKVQLPL 287

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +MP    G+   +M+S+S     VV + MI VG       G+G  +   I   D+
Sbjct: 288 AMPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 331


>gi|52549459|gb|AAU83308.1| ABC transporter permease protein [uncultured archaeon GZfos27E6]
          Length = 263

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 14/169 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    V  P+++I++ IP L ++ F +++      G +  +  AA F +F    + +  +
Sbjct: 92  RAADRVFDPVVEILRPIPPLAWVPFAILW------GGL--SHYAAGFIVFIGAFFPILIN 143

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            Y     + +   + ++       +K    +  PFS+P +   + + M  GW  VVA+EM
Sbjct: 144 TYTGFREVDKTYIDAAKVLGCKEERKLIKSVAFPFSLPYIATGIRIGMGVGWMCVVAAEM 203

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             V  +     G+G  +        ++  L A + +LG++ L+   LFR
Sbjct: 204 FGVSKS-----GLGFRLFQVFWPLHMMDKLVAYMIILGLVALFLDRLFR 247


>gi|258542487|ref|YP_003187920.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633565|dbj|BAH99540.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636624|dbj|BAI02593.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639677|dbj|BAI05639.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642733|dbj|BAI08688.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645788|dbj|BAI11736.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648841|dbj|BAI14782.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256654885|dbj|BAI20812.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 320

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S+I +P+G+  G  P ++  I+P        PA  F  L V+ +  Y   P +    
Sbjct: 137 VISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD-APKI---A 192

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  +            E A +    G R    +++PGI P          
Sbjct: 193 IIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPDLYRDQRILL 252

Query: 515 GGAWNASIVSEV 526
           G AW   IV+E+
Sbjct: 253 GWAWTYLIVAEL 264


>gi|225024938|ref|ZP_03714130.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC
           23834]
 gi|224942269|gb|EEG23478.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC
           23834]
          Length = 505

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF +     
Sbjct: 42  ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 96

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               Y  L  I + +++   +F LS WQ  W + +P ++P ++
Sbjct: 97  ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 136


>gi|297155273|gb|ADI04985.1| putative taurine transport system permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 301

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 16/188 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+++   +     +    L    R +   L P+LD +  +P L  L      F+N++
Sbjct: 104 TLQRVIAGYAVGTAAGYAVGLLMGAVRIVRAALEPLLDALYVVPKLALLPV----FLNMF 159

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G ++A +       VW    S   ++  +     E  + F    WQ F ++ +P 
Sbjct: 160 -GLGEGPQIALVATTVFFFVW---ISTMAAVMGVAEGYREAGQVFGAGPWQMFRHVLLPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245
           S+P ++  M ++       +VASE I   +      G+G  I  + A+ + D++ +    
Sbjct: 216 SLPQVLVGMRVAAGVAVLVIVASEQIAADN------GLGHLIFDSRALFQNDVMFVGIVC 269

Query: 246 LTMLGVIF 253
           + +LGV+F
Sbjct: 270 VAVLGVVF 277


>gi|227113234|ref|ZP_03826890.1| sulfate ester ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 531

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG    P    E+A S  +    + RY+ILP + PY +TG   A    W A I  E+ + 
Sbjct: 161 AGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLA- 219

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 + GLG  + +S +      V + +LI+     A  R L
Sbjct: 220 -----SSEGLGYLLVQSRQLFMLDLVFVCILIIGVLGFAGERVL 258


>gi|218133139|ref|ZP_03461943.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992012|gb|EEC58016.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 7/153 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q   Y+I +   ++ R+      A +  +  G+  G+   +     P    + A P   F
Sbjct: 4   QKNTYIITMH--SLIRIFAGYTAAFVTAVLAGLAAGYVRAVRIMSAPLISAMQALPVTAF 61

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             LV+        N +  ++ +++F   ++    ++ G      +  ++A  F+I G R 
Sbjct: 62  IILVLMIAGAK--NVSAVIAFIVVFPVVYH---GMVQGIDNMDKNLAQMADVFNIHGMRR 116

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +RYI L    PY  T   ++ G  W A   +EV
Sbjct: 117 FRYISLMQCMPYIRTAVKSSAGMCWKAGAAAEV 149


>gi|168185827|ref|ZP_02620462.1| proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           botulinum C str. Eklund]
 gi|169295930|gb|EDS78063.1| proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           botulinum C str. Eklund]
          Length = 528

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 8/118 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+++V+++L       L ++ R+L   ++ + +++Q++P L  L F       L P   I
Sbjct: 27  LASVVVAILIGVPLGILISRKRKLSGPIIGVANVIQAVPSLALLGF-------LIPILGI 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           G+   A+F +F   +  +  + Y  L +I  D+ E +    L+  QK   + +P +MP
Sbjct: 80  GST-PAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPGQKLKMVQLPLAMP 136


>gi|94988688|ref|YP_596789.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992511|ref|YP_600610.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|94542196|gb|ABF32245.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94546019|gb|ABF36066.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS2096]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|49083004|gb|AAT50902.1| PA3443 [synthetic construct]
          Length = 263

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+    +
Sbjct: 62  AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  
Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VVL +L+  
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 564 CF-------VLALNR--FLWHPLY 578
                       L R    WHP Y
Sbjct: 232 VLGKLADLAARGLGRVWLRWHPAY 255


>gi|295680512|ref|YP_003609086.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295440407|gb|ADG19575.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 277

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L ++++IP +  +   VV+F        IG E++ +  I  + +  M  S Y ++  I 
Sbjct: 120 VLQMLRTIPFIALVPIFVVWFG-------IG-EVSKVALIVGAAISPMYLSTYHAIRGID 171

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             L E+ R+FRL+   +   + +P S+PG++  +  + +     +VA+E I
Sbjct: 172 PKLLELGRTFRLTRAHQVRLIILPMSLPGILVGVRYAAAISLLALVAAEQI 222


>gi|260462558|ref|ZP_05810765.1| choline ABC transporter, permease protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031754|gb|EEW33023.1| choline ABC transporter, permease protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 284

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 37/179 (20%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   ++  +++P+LD+MQ++P   +L   +  F +   PG ++      IF I T+   
Sbjct: 122 AAHKPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 177

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
                 +  + ++P+ + E   +F  +  Q  W + +P ++P    GL  ++M+S+S   
Sbjct: 178 T-----HLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 229

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDL----------LAILYAMLTMLGV 251
             VV + +I  G       G+G+ I  AL  +  DL          LAI+   +T +GV
Sbjct: 230 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRMTRIGV 280


>gi|218513147|ref|ZP_03509987.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli 8C-3]
          Length = 203

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 51  IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 110

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 111 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 162

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 163 VQVMSGGQSASVALMMKNQ 181


>gi|282857473|ref|ZP_06266705.1| putative binding-protein-dependent transport systems inner membrane
           component [Pyramidobacter piscolens W5455]
 gi|282584692|gb|EFB90028.1| putative binding-protein-dependent transport systems inner membrane
           component [Pyramidobacter piscolens W5455]
          Length = 257

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 14/149 (9%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQ 461
           VG  +G    +   + P   + +  P+ +  P  +       L P+ W +   L+++GT 
Sbjct: 81  VGTVLGMNERLRDALYPVIYMFSVVPSILLSPFAL------LLAPDFWSASVFLIVYGTV 134

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W  LF  I G       + + A++  + G++    +ILP   P  + G + +    +   
Sbjct: 135 WSTLFAAITGIMTIDKRYLDKAATLELKGFKRLVKVILPAASPAILAGFVNSLRSTFVML 194

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           + SE+  +G  +    G+G ++ +  E G
Sbjct: 195 VYSEM--YGAQY----GMGFFVKKYAEFG 217


>gi|229122458|ref|ZP_04251671.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 95/8201]
 gi|228661019|gb|EEL16646.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 95/8201]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FR      I   + I +G  +GF       + P  Q+L   P     PL V    +
Sbjct: 83  SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+  G  + +  N   G     +   +VA     +  +    +ILP   
Sbjct: 143 GETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAKL 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I  
Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252


>gi|306827280|ref|ZP_07460567.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
 gi|304430427|gb|EFM33449.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|282855801|ref|ZP_06265106.1| sulfate transport system permease protein [Pyramidobacter piscolens
           W5455]
 gi|282586368|gb|EFB91631.1| sulfate transport system permease protein [Pyramidobacter piscolens
           W5455]
          Length = 280

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 19/163 (11%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL--- 436
           +W+ C+   RV    +   ++ +P+GI +G    ++  +    ++L   P   + PL   
Sbjct: 64  VWISCL---RVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWIPLLLA 120

Query: 437 ---VVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFNVIAGASAFPNDFKEVA 483
              V S  + + +    W  LL          +  G  + IL N + G S  P    + A
Sbjct: 121 WFGVASLATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPATLIDSA 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
                +    +  ++LPG  P  VTG     GGAW   + +E+
Sbjct: 181 RVLGASERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEM 223


>gi|182416935|ref|ZP_02948319.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237667333|ref|ZP_04527317.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182379233|gb|EDT76734.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237655681|gb|EEP53237.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 262

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 24/195 (12%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+V+  I+A+I  IP+G+  G+   I +  +P  +     P   ++ L+V       
Sbjct: 71  SMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTLLV------- 123

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW+ +       L+   +   I  + ++      +D+   A +      + +RY+I
Sbjct: 124 ----LWMGIDNKSKITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQIFRYVI 179

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P    G  TA G A+   + +E+ +        +G+G  + ++++      + +G
Sbjct: 180 FPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSDIIFVG 233

Query: 559 VLIMCCFVLALNRFL 573
           + IM    + L++ +
Sbjct: 234 IAIMGITGILLDKII 248


>gi|329115943|ref|ZP_08244660.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
 gi|326906348|gb|EGE53262.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
          Length = 575

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T +  N
Sbjct: 120 AKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  I  +L E + SF  +  QK + + +P +    M G+   MM+++S    
Sbjct: 177 L------GIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V G ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVTG-SMIGAPGLGRKVLSALQHADI 252


>gi|317480354|ref|ZP_07939455.1| phosphate ABC transporter [Bacteroides sp. 4_1_36]
 gi|316903529|gb|EFV25382.1| phosphate ABC transporter [Bacteroides sp. 4_1_36]
          Length = 394

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIF 140
           +Y +  A S+   + L PI++++  IP  + GF    V+  +   ++   V  + LA   
Sbjct: 198 IYMSEVANSQVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSI 256

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +      ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +
Sbjct: 257 VLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGI 316

Query: 201 SGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                  +A  M+     VI      PL  I + IA  + E       Y  L +LGV+  
Sbjct: 317 GRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLF 376

Query: 255 YDQLL 259
           +  LL
Sbjct: 377 FISLL 381


>gi|269963034|ref|ZP_06177371.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832277|gb|EEZ86399.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 299

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  V+ P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNRVQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+   + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLVGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|148238699|ref|YP_001224086.1| ABC-type glycine betaine/L-proline transport system permease
           protein ProW [Synechococcus sp. WH 7803]
 gi|147847238|emb|CAK22789.1| ABC-type glycine betaine/L-proline transport system permease
           protein ProW [Synechococcus sp. WH 7803]
          Length = 298

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 22/149 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A +++L+       L+A+   +  V+ P LD+MQ++P   +L   V+ F        
Sbjct: 101 VITASLLALVIGLPLGILSARYSSVWRVVRPCLDLMQTMPAFVYLIPAVMLFST------ 154

Query: 132 IGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 A+ +I  + +++M     + Q  L  +P DL E  RSF  S  Q  W + +P +
Sbjct: 155 -----GAVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSA 209

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMI 213
           +P    G+   +M+++S     VV + MI
Sbjct: 210 LPTVMTGVNQTIMLALS----MVVIASMI 234


>gi|19746173|ref|NP_607309.1| phosphate ABC transporter [Streptococcus pyogenes MGAS8232]
 gi|19748353|gb|AAL97808.1| putative phosphate ABC transporter [Streptococcus pyogenes
           MGAS8232]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|311070951|ref|YP_003975874.1| glycine betaine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871468|gb|ADP34943.1| glycine betaine ABC transporter (permease) [Bacillus atrophaeus
           1942]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 15/146 (10%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           A++   +  ++ PILD+MQ++P   +L    ++F N+  G V G   + IFA+       
Sbjct: 115 ASQKESVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI--GVVPGVVASVIFAM--PPTIR 169

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           MT      +  +P DL E + +F  +  Q+ + + +P +   ++  +  S+      ++A
Sbjct: 170 MT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSI------MLA 220

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKE 235
             M+V+   ++  PG+GS +  A+ +
Sbjct: 221 LSMVVIA-AMVGAPGLGSEVYSAVTQ 245


>gi|304404131|ref|ZP_07385793.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304347109|gb|EFM12941.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 265

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 15/137 (10%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  + I  N + G  A      E+  ++ + G+  +R II PG  P  + G   A 
Sbjct: 135 LVALGVAFPIYLNTLHGIRAVDPGLIEMGRTYGLRGFSLFRTIIFPGALPSILVGLRFAL 194

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF--------- 565
           G  W   IVSE  S        +G+G     + E      VVL ++I             
Sbjct: 195 GIMWITLIVSETIS------ANSGIGYMAMNAREFFQMDIVVLSIVIYALLGKLSDWIAK 248

Query: 566 VLALNRFLWHPLYLYGT 582
           V+  +   WHP Y  G 
Sbjct: 249 VMERSWLQWHPHYRKGK 265


>gi|149198798|ref|ZP_01875841.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149138234|gb|EDM26644.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 505

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 19/185 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQ-----------LLAAFPANVFFPLVVSCVSYY 444
           +A++I IP+GI  G  P I + + P  Q           L+     +  F    +     
Sbjct: 305 LAAVIAIPMGILCGLSPSIMTALNPLIQTFRPVSPLAWVLITIQIIDGIFVGDKALTGEI 364

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N  L   + +   + W  L N   G S+   D   VA    +  +     I++P   P
Sbjct: 365 LKNTFLHAGITVALCSMWATLSNTALGVSSVDPDHMNVAKVLKLNWFDRIFKIVIPSAIP 424

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG     G  W   IV+E+ +         GLG +I +  +        L  +I+C 
Sbjct: 425 YIFTGLRITLGVGWMVLIVAEMMATSR------GLGWFIDQEYQNNKVES--LANIIVCI 476

Query: 565 FVLAL 569
           F++ L
Sbjct: 477 FIIGL 481


>gi|330836323|ref|YP_004410964.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta coccoides DSM 17374]
 gi|329748226|gb|AEC01582.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta coccoides DSM 17374]
          Length = 271

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   ++ A P   F  L +  +    + P   +++LM+    W    NV  G      
Sbjct: 111 VRPAIGIIKAAPVTSFIILALFWLGRESVAP--LITMLMVLPIVWG---NVTEGLGTLDR 165

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +   +A ++     +  R++I+P + PY++    +A G AW A I +E+
Sbjct: 166 NLMVMARTYRFGRGKTLRFVIVPSLMPYFIAALSSAIGFAWKAGIAAEL 214


>gi|226360717|ref|YP_002778495.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239202|dbj|BAH49550.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 273

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 10/160 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + + + GI+   +P  +  I        ++  +AS T    L    +SLL  +  A L  
Sbjct: 41  VYVTVSGIRPQVLPSPLRVIQQGWRARDAISGHASATLQVTLIGFAVSLLCAWALAVLVD 100

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150
            S  L    VP+  + Q++PI+      +++F   L P KV+   LA  F         M
Sbjct: 101 FSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIALATFF--------PM 151

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           T  + +      R+   + RS   S WQ+F Y+ +P ++P
Sbjct: 152 TIGLIEGFAAADREAGALLRSMGASRWQEFRYVRLPSAIP 191


>gi|15675204|ref|NP_269378.1| putative phosphate ABC transporter permease [Streptococcus pyogenes
           M1 GAS]
 gi|94990578|ref|YP_598678.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|13622371|gb|AAK34099.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|94544086|gb|ABF34134.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10270]
          Length = 311

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242

Query: 215 VGDTVIP 221
               V+P
Sbjct: 243 GNSAVMP 249


>gi|26986982|ref|NP_742407.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24981597|gb|AAN65871.1|AE016215_6 sulfonate ABC transporter, permease protein SsuC [Pseudomonas
           putida KT2440]
          Length = 265

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 84/178 (47%), Gaps = 19/178 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++ +   +  +LG I  L  + L R  + W   +++ R  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVWLRWHPAYQVARKEG 264


>gi|239928177|ref|ZP_04685130.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291436507|ref|ZP_06575897.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291339402|gb|EFE66358.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 296

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I  P+G+ +     + + I P    L + P+  + P     V +  LN N  +  ++
Sbjct: 108 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NQMMYAVI 163

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   +++G    P  F     +   TG +   +I+LP   P YV G       
Sbjct: 164 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 223

Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +W + + +E +AS+  + +   GLG  +           V   +L++    +A++  ++ 
Sbjct: 224 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAIDLLIFS 280

Query: 576 PL 577
           PL
Sbjct: 281 PL 282



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 14/203 (6%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L     +LL       L A+ + +   + PIL  +QS+P + ++   V++        
Sbjct: 100 RGLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW-------- 151

Query: 131 VIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +G     ++A I    V ++   +   +  +P       R+   +G +  W++ +P ++
Sbjct: 152 -LGLNNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAAL 210

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           PG V  +    +  W  ++A+E+I    D  +   G+G  +       D+  +  A+L +
Sbjct: 211 PGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLI 267

Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271
           L V    D L+F P+  W  + R
Sbjct: 268 LTVGIAIDLLIFSPLERWVLRGR 290


>gi|227823101|ref|YP_002827073.1| putative ABC transporter, permease protein; putative aliphatic
           sulfonates transporter [Sinorhizobium fredii NGR234]
 gi|227342102|gb|ACP26320.1| putative ABC transporter, permease protein; putative aliphatic
           sulfonates transporter [Sinorhizobium fredii NGR234]
          Length = 278

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 75/211 (35%), Gaps = 33/211 (15%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R +  +++   I + +GI  G             Q+L   P     PLV+     
Sbjct: 83  AVSGARALAGLVVGGTIGLALGIANGISKLSEQLTDTSLQMLRTIPHLAMIPLVI----- 137

Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                 LW  +       L   G  + I  N   G      +  E+   + + GW  +R 
Sbjct: 138 ------LWFGIGEESKLFLTSLGVLFPIYLNTFHGVRNVDRELIEMGRIYGMNGWTLFRK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P    G   A G  W   IVSE  +       ++G+G    ++ E      VV
Sbjct: 192 VILPGALPSIFVGLRYALGIMWLTLIVSESIA------ASSGIGHMANQAREFMMTDVVV 245

Query: 557 LGVLIMCCF---------VLALNRFLWHPLY 578
           L +LI              +  +   W+P+Y
Sbjct: 246 LSLLIYAALGKLADVIARSMERHALSWNPVY 276



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L ++++IP L  +   +++F      K+    L  +F I+         + +  + N+ R
Sbjct: 121 LQMLRTIPHLAMIPLVILWFGIGEESKLFLTSLGVLFPIY--------LNTFHGVRNVDR 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +L E+ R + ++GW  F  + +P ++P +   +  ++   W  ++ SE I     +
Sbjct: 173 ELIEMGRIYGMNGWTLFRKVILPGALPSIFVGLRYALGIMWLTLIVSESIAASSGI 228


>gi|262203356|ref|YP_003274564.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262086703|gb|ACY22671.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 291

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV AG         E A S  +T     R+IILPG  P  + G   A G  W   +V+E 
Sbjct: 174 NVFAGIRNVDQKLIEAARSLDLTRIEMLRFIILPGALPQTLVGLRQALGIGWLVLVVAE- 232

Query: 527 ASWGHIHLRTTGLGAYIAESTE 548
                +   T GLG  + ++ E
Sbjct: 233 -----MQTTTVGLGFIMNDAKE 249


>gi|311696188|gb|ADP99061.1| binding-protein-dependent transport systems inner membrane
           component [marine bacterium HP15]
          Length = 344

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/148 (19%), Positives = 75/148 (50%), Gaps = 14/148 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S  L  +++P+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ N+
Sbjct: 177 ARSNSLQRMIIPVLDMLQTLPPFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTNL 235

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +      + +D+ E + +F ++  QK + + +P ++P +       M+G    ++ S
Sbjct: 236 GIRL------VDKDVIEAADAFGMTPRQKLYKVQIPLALPNI-------MAGVNQTIMMS 282

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +VV  +++  PG+G  +   I+  +L
Sbjct: 283 LAMVVIASLVSAPGLGVLVLRGIRNLEL 310


>gi|218529259|ref|YP_002420075.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218521562|gb|ACK82147.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 293

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P + + + P  Q+L   P   + PL +        +       L+  G  + IL N
Sbjct: 123 IGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLGATS----AFFLVFLGAFYPILVN 178

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  +      E A+    TG   +  ++LP   P   TG     G AW   +V E+ 
Sbjct: 179 TVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 238

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVV---LGVLIMCCFV 566
                    TGLGA I E+ +  S  E+V   +GV+ +  FV
Sbjct: 239 G------VQTGLGAVIMEARQL-SRTEIVICGMGVIGVAGFV 273


>gi|145596388|ref|YP_001160685.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145305725|gb|ABP56307.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 6/142 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY- 443
           IT    VV  +++++  + +GI +    H+     P    + A P     PL+V  VS+ 
Sbjct: 86  ITTLMTVVGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLV--VSFG 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +   P L +  L+ F   + I+ +   G +  P D  E+A S H + W+ +R +  P   
Sbjct: 144 WGAKPILTMVFLLCF---FPIVLSTATGLTTTPADLAELARSLHASWWQSFRKVRFPAAL 200

Query: 504 PYYVTGAITACGGAWNASIVSE 525
           P    G   A   A   +++ E
Sbjct: 201 PQVFVGLKVAMPLAAIGAVIGE 222


>gi|303252519|ref|ZP_07338682.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302648487|gb|EFL78680.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 215

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    S +Q+F  + +P 
Sbjct: 73  PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGASAFQRFVRVTIPL 132

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 133 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 186

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 187 SIALTVLMALMLY--VYYRANKLLNKKVELE 215


>gi|227818437|ref|YP_002822408.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337436|gb|ACP21655.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 278

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  N   G  A P    EV ++F     R  R I+LP   PY + G   A G A  A I+
Sbjct: 156 ICINTWVGVKAVPRTLVEVGTAFCAPQSRIMRQIVLPATLPYIMAGLRLAIGKAVIAMII 215

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA--LNRFL 573
           +E  +        +GLG  I  +    SF    + V I+C  +LA  L+R +
Sbjct: 216 AEFLT------AISGLGGIIINAAN--SFRTAEMFVPIICVMILAVVLDRLV 259


>gi|327439348|dbj|BAK15713.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 272

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 9/172 (5%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +V  + I  D  +L  Y   + LR+L+   + LL    +  L   ++ +  +  P+++ +
Sbjct: 62  LVGAIEIASD-GTLFLYMGYSFLRVLAGWTLGLLIAVPFGLLIGTNKFVRALFEPVINFV 120

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP L F+T  +++F        IG E + +F I  +  + +T +    + +I  D   
Sbjct: 121 RFIPPLAFITLFMLWFG-------IG-EQSKVFLIVYATFFVITINTLTGVLSISNDKLL 172

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            ++S   S +Q   Y+ +P ++P +     ++M   +  +V +EM+   + +
Sbjct: 173 SAKSMGASKFQTLIYVVIPATIPYIFTGAKLAMGSSFMAIVGAEMVAANEGI 224



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 18/137 (13%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL---- 454
           +I +P G+ IG    + +  +P    +   P   F  L +           LW  +    
Sbjct: 94  LIAVPFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFM-----------LWFGIGEQS 142

Query: 455 ---LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+++ T + I  N + G  +  ND    A S   + ++   Y+++P   PY  TGA 
Sbjct: 143 KVFLIVYATFFVITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAK 202

Query: 512 TACGGAWNASIVSEVAS 528
            A G ++ A + +E+ +
Sbjct: 203 LAMGSSFMAIVGAEMVA 219


>gi|288958181|ref|YP_003448522.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288910489|dbj|BAI71978.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 250

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 19/173 (10%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +++ IP + ++ F +++F          +E AA F I  +  W   ++ Y ++  + 
Sbjct: 96  VVRMLRPIPAIAWIPFAIIWFGV--------SEGAASFLIALTVFWINYYASYAAVRGVD 147

Query: 163 RDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +DL E+  +F   G   + + + +P ++PG++  +   +  GW  VVA+E+         
Sbjct: 148 KDLIELGYAFGQGGLVPRLFKIILPGALPGILSGLRAGLGQGWMTVVAAEL-------FG 200

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           + G+G  +   ++   LLA    +L M+ +  LY    F  M V S     +R
Sbjct: 201 ISGLGMRM---MEASGLLATHIVVLYMVTIALLYGVSDFLFMQVQSRVLSWQR 250


>gi|146311577|ref|YP_001176651.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145318453|gb|ABP60600.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 245

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +R +   ++ I ++  ++P L  L   +V         V+G  +  AI A+F + +  +
Sbjct: 80  AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VLGIGDKPAIVALFLASLLPI 130

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             + Y  LC++P  L E +    ++ WQ+ + + +P ++P
Sbjct: 131 VRNTYAGLCSVPASLLEAANGIGMTKWQRLYQVEIPNALP 170


>gi|149182051|ref|ZP_01860536.1| ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850230|gb|EDL64395.1| ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 251

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 25/206 (12%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129
           R+   + I+LL       L AKS+     L  +L   QS+P + +L   +++F MN    
Sbjct: 61  RLFIGLGIALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPLAIMWFGMN---- 116

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +     + M  ++   + N+P      +++    G   F  + +P S+
Sbjct: 117 -----ETAVIFVVVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASV 171

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P  V    ++ +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ + 
Sbjct: 172 PYAVTGARLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIGVMIIIG 225

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERT 275
            +  + DQL+F          R+ER+
Sbjct: 226 VIGAIVDQLIFS---------RIERS 242



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 4/142 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+ + + IA +I   +G+ +         +        + P+ V+ PL    + ++ +N 
Sbjct: 61  RLFIGLGIALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPL---AIMWFGMNE 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  +++ G  + +  N+  G    P  F   A +    G   +  + LP   PY VT
Sbjct: 118 TAVI-FVVVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASVPYAVT 176

Query: 509 GAITACGGAWNASIVSEVASWG 530
           GA  A   AW A +  E+ S G
Sbjct: 177 GARLAWAFAWRALMAGELLSTG 198


>gi|77461460|ref|YP_350967.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77385463|gb|ABA76976.1| putative glycine betaine/L-proline ABC transport system, membrane
           protein [Pseudomonas fluorescens Pf0-1]
          Length = 287

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T  +++ A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+  
Sbjct: 95  QETMETLAQVMFATLVCVVIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 154

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       +FAI  +    +T   Y  + ++P++L +  ++F  S  Q   
Sbjct: 155 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 205

Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + +P +MP    G+   +M+S+S          M+V+   ++   G+G  +  A+   D
Sbjct: 206 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 254

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262
           +     A L ++ +  + D++  +P
Sbjct: 255 IALGFEAGLAIVLLAIMLDRICKQP 279


>gi|158314114|ref|YP_001506622.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158109519|gb|ABW11716.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 281

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 35/220 (15%)

Query: 45  PRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           P  +VD+    LD H+L Q       +T   L+ + IS++     A L +++R +   + 
Sbjct: 61  PHAVVDVA--FLDRHNLEQLLRALWLSTSVALTGLGISIVLGMALAVLMSQARWIERSVY 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P   I+Q+IP L  +     +F   +  +VI   L A+F I +S ++         L ++
Sbjct: 119 PYAVILQTIPTLAMVPLIGFWFHYGFVSRVIVCVLIALFPIISSTLFG--------LQSV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R + ++    R+  W     L +P ++P        + SG   F V++ + VVG  V  
Sbjct: 171 DRGMLDLFALHRVPRWVLLVKLRLPAALPA-------TFSG---FQVSAGLAVVGAVVGD 220

Query: 222 L------PGIGS----YIALAIKEQDLLAILYAMLTMLGV 251
                  PGIG     Y A  + EQ L A++ A  ++LGV
Sbjct: 221 FFFKQGDPGIGVLIDLYRARLMTEQLLGAVILA--SLLGV 258


>gi|95928883|ref|ZP_01311629.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
 gi|95135228|gb|EAT16881.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
          Length = 269

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 5/114 (4%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  NV  G       +   A    +     +R ++LPG  P+ ++G     G +W   + 
Sbjct: 147 IAINVAGGVKRVDEMYIRAARMLGLNNRMLFRSVLLPGALPHILSGLRVGLGSSWRVLVA 206

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +E+     +  R TGLG  I +S     F +  + + I+C   L + R ++ PL
Sbjct: 207 AEM-----VVGRGTGLGYAIIQSRWTLDFAKAFVCIAIICGIGLIMERVIFIPL 255


>gi|302557597|ref|ZP_07309939.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
 gi|302475215|gb|EFL38308.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
          Length = 304

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I  P+G+ +     + + I P    L + P+  + P     V +  LN N  +  ++
Sbjct: 116 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NQMMYAVI 171

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   +++G    P  F     +   TG +   +I+LP   P YV G       
Sbjct: 172 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 231

Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +W + + +E +AS+  + +   GLG  +           V   +L++    +A++  ++ 
Sbjct: 232 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAIDLLIFS 288

Query: 576 PL 577
           PL
Sbjct: 289 PL 290



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 14/195 (7%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LL       L A+ + +   + PIL  +QS+P + ++   V++         +G     
Sbjct: 116 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW---------LGLNNQM 166

Query: 139 IFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           ++A I    V ++   +   +  +P       R+   +G +  W++ +P ++PG V  + 
Sbjct: 167 MYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLK 226

Query: 198 MSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              +  W  ++A+E+I    D  +   G+G  +       D+  +  A+L +L V    D
Sbjct: 227 QGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAID 283

Query: 257 QLLFRPMIVWSNKFR 271
            L+F P+  W  + R
Sbjct: 284 LLIFSPLERWVLRSR 298


>gi|222102603|ref|YP_002539642.1| ABC transporter [Agrobacterium vitis S4]
 gi|221739204|gb|ACM39937.1| ABC transporter [Agrobacterium vitis S4]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 14/141 (9%)

Query: 379 VIWLGCITM------FRVVVLIIIAS----IIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           V  LGC  M         + L+I A+    +I IPVGI  GF       ++P   L+   
Sbjct: 77  VAMLGCTVMGLWAETMSTLALVITATFMALVIGIPVGIVAGFVQAFDKIVEPVLDLIQTL 136

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P  ++    ++ + Y    P   L   +I      I    + G    PNDF E+  +  +
Sbjct: 137 PPYIYLLPTIALMGY---GPATALLATVIVAMPPAIRLTSL-GIRRTPNDFIELGQANGL 192

Query: 489 TGWRWWRYIILPGIFPYYVTG 509
           T W+ +  I LP   P  + G
Sbjct: 193 TSWQMFVKIRLPFAIPSVMAG 213


>gi|162448436|ref|YP_001610803.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161159018|emb|CAN90323.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 302

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           + E+A +  +T W++ R + LPG  P ++ G   A  GAW A +V E      I+  T+G
Sbjct: 198 YVELAETVRLTRWQFIRKVALPGALPGFLMGLRLAVTGAWLALVVVE-----QIN-ATSG 251

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +G  ++ +   G    ++LG+++   F LA +
Sbjct: 252 IGYMMSLARSYGQTEIILLGLVVYGLFGLASD 283



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 8/129 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V A LA  +R    +L   + I ++IP L  +   +++F      KV+   L  +  ++ 
Sbjct: 126 VLALLAGLTRVGEALLDGPVQIKRAIPTLALIPLLILWFGIGEQMKVLTIALGVVIPVY- 184

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     + +L  I     E++ + RL+ WQ    + +P ++PG +  + ++++G W
Sbjct: 185 -------VHTHAALRTIDARYVELAETVRLTRWQFIRKVALPGALPGFLMGLRLAVTGAW 237

Query: 205 FFVVASEMI 213
             +V  E I
Sbjct: 238 LALVVVEQI 246


>gi|297582679|ref|YP_003698459.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297141136|gb|ADH97893.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 284

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 25/171 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A V+S++    +  L +KS     ++ P+LD MQ++P   +L   V +F     G V 
Sbjct: 105 LLASVLSVIIGVPFGILMSKSDTAEAIMKPVLDFMQTMPAFVYLIPAVAFF---GIGMVP 161

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188
           G   + IFA   T ++ N+       +  +P ++ E S +F  +  QK + + +P +   
Sbjct: 162 GVFASLIFATPPTVRLTNL------GIRQVPTEMVEASDAFGSTPAQKLFKVELPMAKVT 215

Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            M G+   +M+++S          M+V+  ++I  PG+G  +  A++   +
Sbjct: 216 IMAGINQTVMLALS----------MVVIA-SMIGAPGLGREVLSALQRAQV 255


>gi|126731790|ref|ZP_01747594.1| ABC transporter permease protein [Sagittula stellata E-37]
 gi|126707617|gb|EBA06679.1| ABC transporter permease protein [Sagittula stellata E-37]
          Length = 645

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +A SRR   V+   +D++Q++P L +L   V   M L PG V     +A+ AI    V  
Sbjct: 475 SALSRRAKSVIDVAVDLIQTLPSLVYL---VPIVMLLGPGDV-----SAVLAIAAYVVGA 526

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +      +L + P  L E  RS   +  Q F  + +PF++PGL+  +  ++  G   VV 
Sbjct: 527 VIRYCDHALRSAPDSLIEAVRSTGATEAQVFRIVRLPFAVPGLLLGLNQAIMLGISMVVV 586

Query: 210 SEMI 213
           + ++
Sbjct: 587 TALV 590


>gi|111220875|ref|YP_711669.1| binding-protein-dependent transport system inner membrane component
           [Frankia alni ACN14a]
 gi|111148407|emb|CAJ60079.1| conserved hypothetical binding-protein-dependent transport system
           inner membrane component [Frankia alni ACN14a]
          Length = 264

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +E+  S  +  WR+ R + LPG  P++ TG   A   A  A++V+E     +   R  GL
Sbjct: 160 RELMRSLAVGPWRFARTVSLPGALPFFFTGLRLASSLAVIAAVVAE-----YFGGRQNGL 214

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           G+ I  +    ++P     V+  C   L
Sbjct: 215 GSRITSAAANSAYPRAWAFVVAACLLGL 242


>gi|148271540|ref|YP_001221101.1| putative sugar ABC transporter permease [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147829470|emb|CAN00383.1| putative sugar ABC transporter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 276

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 33/200 (16%)

Query: 43  TVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSAMVIS-------LLFTF--VYA 87
           T P+D++   P       TLD ++  Q  S     +++++VIS       LL +    YA
Sbjct: 37  TKPQDLISSTPSLFPADPTLDGYA--QAISTQLPNLVTSLVISIGCVILTLLISLPAAYA 94

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLT-----FTVVYFMNLYPGKVIGAELAAI-FA 141
           T   + R  G V+   L + Q IP +  +T     +  +  +N YPG ++    A++ FA
Sbjct: 95  TAKFRVRGTGAVMFVFL-LAQMIPGIVLVTALFAIYDALGLLNTYPGLILAGATASVPFA 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +   + +         +  IP +L E +R    S W+ F  + VP S   +V   + S  
Sbjct: 154 VIVLRAF---------MLGIPDELLEAARIDGASSWRAFVSIVVPLSRNAIVTAALFSFL 204

Query: 202 GGWFFVVASEMIVVGDTVIP 221
             W   + +  +  G++++P
Sbjct: 205 FAWADFLNANSLTSGNSIVP 224


>gi|13471349|ref|NP_102915.1| ATP-binding protein of ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022091|dbj|BAB48701.1| ATP-binding protein of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PFA +L   P    FPL+    + Y  N    L L       + IL N   G ++   + 
Sbjct: 115 PFAIVLQVTPIVAIFPLI----NIYVNNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNL 170

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++      T W+  RY+ LP   PY++ G   A G +   ++V+E  +       ++GL
Sbjct: 171 RDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQ--SSGL 228

Query: 540 GAYIAESTEKGSFPEV 555
            + I E+  + + P +
Sbjct: 229 ASRIIEAGYRLNAPRL 244


>gi|219669661|ref|YP_002460096.1| ABC transporter inner membrane protein [Desulfitobacterium
           hafniense DCB-2]
 gi|219539921|gb|ACL21660.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 252

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR+ V + I   + +P+G++IG        I P    L   P   + P+ +       
Sbjct: 62  SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFI------- 114

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       LM++   + +  N + G  +     KEVA +F +       ++ 
Sbjct: 115 ----LWLGIGEAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARITHVY 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           LP   P++  G        W A + +E+ +       + GLG  + E 
Sbjct: 171 LPSAAPHFFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEG 212


>gi|268680177|ref|YP_003304608.1| binding-protein-dependent transporters inner membrane component
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618208|gb|ACZ12573.1| binding-protein-dependent transport systems inner membrane
           component [Sulfurospirillum deleyianum DSM 6946]
          Length = 260

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             + G+     D KE+  SFHI  ++  R +  P +F Y     ++A G +W   I++E+
Sbjct: 147 GALQGSRTIEGDLKEMMESFHIGFFQKVRDLYFPHLFSYLFPSWVSALGMSWKIVIMAEL 206

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFP------EVVLGVLIMCCFVL 567
            S       + G+GA +A +      P       V++GVL    +++
Sbjct: 207 LS------SSDGIGASLAIARSHLDTPLALALVSVIIGVLFFVEYII 247


>gi|167772998|ref|ZP_02445051.1| hypothetical protein ANACOL_04386 [Anaerotruncus colihominis DSM
           17241]
 gi|167664931|gb|EDS09061.1| hypothetical protein ANACOL_04386 [Anaerotruncus colihominis DSM
           17241]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 15/130 (11%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G  L A+F+ F        F MY+    IPR L E +R    S WQ FW +G+P    G
Sbjct: 150 MGIILPAVFSTFP------VFIMYRFFRGIPRSLIESARLDGASEWQIFWRIGLPLGSAG 203

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  M++S    W  +      +   ++ P    LP I +  A       + A++ A+L 
Sbjct: 204 VMSAMVLSFLECWSMIEQPMTFLKNRSLWPLSLYLPDIAADRAGLALAASVTALIPAIL- 262

Query: 248 MLGVIFLYDQ 257
               +FLY Q
Sbjct: 263 ----VFLYGQ 268


>gi|119961121|ref|YP_948272.1| ABC-type nitrate/sulfonate transport system, permease component
           [Arthrobacter aurescens TC1]
 gi|119947980|gb|ABM06891.1| putative ABC-type nitrate/sulfonate transport system, permease
           component [Arthrobacter aurescens TC1]
          Length = 259

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 19/141 (13%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           +V    LAA+F    + V          + ++  DL +V+R +RLS  ++   + +P +M
Sbjct: 123 RVTSIALAALFPTMIATV--------DGIRSVSNDLMDVARVYRLSRKERVLNVLLPAAM 174

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + +S+   +  ++ASEM+  G +     GIG+   LA ++  + A ++A + +L
Sbjct: 175 PQIFSGLQVSLQVAFIVMIASEML--GSS----QGIGAMTLLA-QQSFMTADMWAGILLL 227

Query: 250 GVI-FLYD---QLLFRPMIVW 266
           GVI FL +    LL R ++ W
Sbjct: 228 GVIGFLVNILFSLLKRKVLSW 248


>gi|91786945|ref|YP_547897.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91696170|gb|ABE42999.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 282

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV    ++AS+I +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 91  MTVWRVFGGFVLASLIAVPLGIAMGTYKGVEAFFEPFVSFCRYLPASAFIPLLILWAGIG 150

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L+IF G+ + I+  V         D  E A +           +++PG  
Sbjct: 151 ETQ-----KILVIFIGSVFQIVLMVAVTVGGARRDLVEAAYTLGAADRGIITRVLIPGAA 205

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 206 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 242


>gi|312116273|ref|YP_004013869.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221402|gb|ADP72770.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 280

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 21/203 (10%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V       V    A  S+R+     P  D ++ IP + +L   V++     P KV+ 
Sbjct: 93  QALVYGATAAIVLGVAAGLSKRVEQFFGPTFDTLRHIPGIAWLPLIVLWLGIGAPAKVLV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              A  F +F         +  Q + N+ +   E++    L+ WQ    + +P + P ++
Sbjct: 153 IAKAVFFPVF--------LNTLQGIRNVEKSHIELANVLTLNRWQMVRKVVLPSAFPSIM 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGV 251
            ++  +    W       M+V+ + +  L G+G  I  A  +   D L +   ++ ++G 
Sbjct: 205 VSLRYAAGLAW------AMVVIAEGLSGLEGLGFLIFRAQGLLLTDQLVVCMIIIGLVG- 257

Query: 252 IFLYDQLLF---RPMIVWSNKFR 271
            F  D++++   R ++ W   F 
Sbjct: 258 -FTIDRIMYLAQRRLLRWKQGFE 279


>gi|268592987|ref|ZP_06127208.1| taurine uptake ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291311460|gb|EFE51913.1| taurine uptake ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 252

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL + I G    P  + E+ + +    W+  R I +P + P   TG   A G +W   + 
Sbjct: 133 ILLSTINGIQTTPMTYIELGNLYQFNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATVVA 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           +E+ +        +G+G  I ++      P V++G+L++
Sbjct: 193 AEMIA------ANSGIGYRINDARIMLDSPVVIVGILVI 225



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 8/129 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S R   +    L+ ++ IP L ++   +++F        IG E+  I  I  S  + +
Sbjct: 82  ALSLRTNQIFNLTLNAIRQIPPLAWIPLLILWFG-------IG-EVTKIILIIKSAFFPI 133

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             S    +   P    E+   ++ + WQK   + +P  +P L   + ++M   W  VVA+
Sbjct: 134 LLSTINGIQTTPMTYIELGNLYQFNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATVVAA 193

Query: 211 EMIVVGDTV 219
           EMI     +
Sbjct: 194 EMIAANSGI 202


>gi|164687397|ref|ZP_02211425.1| hypothetical protein CLOBAR_01038 [Clostridium bartlettii DSM
           16795]
 gi|164603171|gb|EDQ96636.1| hypothetical protein CLOBAR_01038 [Clostridium bartlettii DSM
           16795]
          Length = 225

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y++ +V+      P + ++ A     T W   R I+LP I P  ++GA+     A+  SI
Sbjct: 108 YVILSVLPKLKQLPANIEDAALDLGATPWYALRKIVLPQIKPGIISGALM----AFTMSI 163

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              V S+       T L   I   T +G  PE+     +M   VLAL
Sbjct: 164 DDFVISFFTTGNGVTNLSIEIYSMTRRGLTPEINALSTLMFVVVLAL 210


>gi|126731474|ref|ZP_01747280.1| spermidine/putrescine ABC transporter, permease protein PotC
           [Sagittula stellata E-37]
 gi|126708010|gb|EBA07070.1| spermidine/putrescine ABC transporter, permease protein PotC
           [Sagittula stellata E-37]
          Length = 267

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D++E A+  + + W  +R + LP IFP   +GA+ A   + +  I S + S G     TT
Sbjct: 164 DYEEAATDLYASRWVVFRRVTLPLIFPGLFSGAMLAFLISMDDFITSNMLSSGG----TT 219

Query: 538 GLGAYIAESTEKGSFPEV--VLGVLIMCCFVLA 568
            L  YI      G+ PE+  V  +LI+   VLA
Sbjct: 220 TLPVYIFSLIRVGTSPELNAVATLLILGSLVLA 252


>gi|289706640|ref|ZP_06502989.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289556656|gb|EFD49998.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 289

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +  P++  ++++P L ++   +++       KV    + A F +FT+       
Sbjct: 125 SRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTT------- 177

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +Y +L ++   L E  R+F   G      + +P  +P +   + ++++  W F+VA+E+
Sbjct: 178 -VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAEL 236

Query: 213 IV 214
           I 
Sbjct: 237 IA 238


>gi|197295190|ref|YP_002153731.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944669|emb|CAR57273.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 285

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +I+D +   + V  + ++   +TLR+ +          V       SRR+  +  P 
Sbjct: 62  APSEILDTL-ARMGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRVDALFEPT 120

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       K+    L AI A F      +  ++   + ++ R
Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRDVDR 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456
           VG  +G    + +  +P  Q L A P+  + P+++           LWL +       L+
Sbjct: 103 VGAAMGLSRRVDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + +   V+AG         E+ + + +     +R I+LP   P  VTG  T    
Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 244


>gi|114769693|ref|ZP_01447303.1| putative permease protein [alpha proteobacterium HTCC2255]
 gi|114549398|gb|EAU52280.1| putative permease protein [alpha proteobacterium HTCC2255]
          Length = 303

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 23/172 (13%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S R   ++ P+LD+MQ+IP   +L   V   M L  GKV G  L A+    +  +  +
Sbjct: 133 SRSDRAQRIITPVLDVMQTIPSFVYLIPVV---MLLGIGKVPG--LLAVMIYASPPIIRL 187

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
           T      +  +  ++ E + +F  +  QK + + +P ++P    G+   +MMS+S     
Sbjct: 188 T---NLGIRLVDAEVLEAADAFGSNYRQKLFQVQIPLALPNIFAGVNQTIMMSLS----M 240

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V       PG+G  +  A+  Q L   L   L ++ +  ++D++
Sbjct: 241 VVIAAMIGV-------PGLGVPVLRAVSNQYLALGLMNGLAIVAIAIIFDRV 285


>gi|108762126|ref|YP_630471.1| glycine betaine/L-proline ABC transporter permease [Myxococcus
           xanthus DK 1622]
 gi|108466006|gb|ABF91191.1| glycine betaine/L-proline ABC transporter, permease protein
           [Myxococcus xanthus DK 1622]
          Length = 277

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +++L+        AA SR +  VL P LD+MQ++P   +L   V++F     GKV 
Sbjct: 95  LSSAMVALVLGIPLGIWAAYSRVVERVLRPALDLMQTMPAFVYLIPAVLFF---RLGKVP 151

Query: 133 GAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
           G     IFA+  + ++ N+       +  +P ++ E + +F  +  Q    + +P ++P 
Sbjct: 152 GVVATVIFAMPPAVRLTNL------GIRQVPTEVVEAAIAFGATPRQTLLNVQLPIAVPT 205

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVG 216
              G+   +M+S+S     VV S MI  G
Sbjct: 206 LLAGVNQTIMLSLS----MVVISAMIGAG 230


>gi|271969470|ref|YP_003343666.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270512645|gb|ACZ90923.1| ABC-type transporter, permease protein [Streptosporangium roseum
           DSM 43021]
          Length = 272

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +    +A ++ IP+G+ IG+   ++  + P  +L     A    P+ V  +    
Sbjct: 82  SLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALALLPVFVLILG--- 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     +S+++ +   W IL N +AG  +      + A S  +   R ++ +ILP   P 
Sbjct: 139 LGETSKISIIL-YACAWPILLNTVAGVKSVDPLLIKSARSMGLRPVRLFQKVILPAAVPT 197

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A  GA++  ++      G       GLG  I  +      P++  G+L +   
Sbjct: 198 IFTGIRLA--GAYSILVLVAAEMVGA----KAGLGYLITYAQFNFRVPDMYAGILTISVL 251

Query: 566 VLALNRFL 573
            L  N+ L
Sbjct: 252 GLLFNQLL 259


>gi|194467573|ref|ZP_03073560.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
 gi|194454609|gb|EDX43506.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
          Length = 221

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 20/220 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420
           +G I+ +F      Y  ++G   +  VV L+I + II +P+G       +I S+I+P   
Sbjct: 7   LGQIIQYFQTNGGQYWQYVGQHIVLTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 58

Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
               FAQLL   P+     L++  +    +   + L +L +      +L N I G +   
Sbjct: 59  FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 114

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535
             +KEV  +  +   +  R I +P   PY + G  +       +A++ + + + G   L 
Sbjct: 115 PLYKEVGIALGMDQRQLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 174

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TGLG Y       G+    +L +L M  F   + +   H
Sbjct: 175 FTGLGLYDMSYVMIGAVSVAILSLLAMISFDFLIRKVQKH 214


>gi|154497695|ref|ZP_02036073.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC
           29799]
 gi|150273193|gb|EDN00338.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC
           29799]
          Length = 248

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           E A ++    W+  R + LP + PY+ +G  TA G AW A + +EV
Sbjct: 148 EGAKTWRFGRWKTLRLVYLPSVLPYFASGCSTALGLAWKAGVAAEV 193


>gi|119387470|ref|YP_918504.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378045|gb|ABL72808.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 275

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 15/170 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LA    RL   LVP+LD++Q++P   +L    +  +   P     A +A +       + 
Sbjct: 113 LAGLMPRLDRALVPVLDLIQTMPPYIYL-LPAIALLGFGPAT---ALVATVIVAMPPAIR 168

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
             +  + Q+    P +  E+  +  ++  Q FW + +PF+MP ++  +  S+   +  VV
Sbjct: 169 LTSLGIRQT----PNEFIELGHASGVTPAQMFWKIRLPFAMPSIMAGVNQSLMMAFGMVV 224

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + ++  G       G+G  I  AI+  D+   + A + ++ +  + D++
Sbjct: 225 IAGIVGSG-------GLGETIYGAIRTLDIATSINASIAIVVLTMVLDRV 267


>gi|330891653|gb|EGH24314.1| taurine ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 291

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S G+++    Y D      LG  ++ R+ + +  A +  IP+GI IG          P  
Sbjct: 77  SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V        +  L L  L IF     I      G           
Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTKVRA 191

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T W+  R+++LP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVGAELIA------ATSGLGFM 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +  + +      VVLG+L++     A+ 
Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273


>gi|251792793|ref|YP_003007519.1| glycine betaine [Aggregatibacter aphrophilus NJ8700]
 gi|247534186|gb|ACS97432.1| glycine betaine [Aggregatibacter aphrophilus NJ8700]
          Length = 491

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF +     
Sbjct: 28  ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 82

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               Y  L  I + +++   +F LS WQ  W + +P ++P ++
Sbjct: 83  ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 122


>gi|323499592|ref|ZP_08104561.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sinaloensis DSM 21326]
 gi|323315332|gb|EGA68374.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sinaloensis DSM 21326]
          Length = 266

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ+  ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQRLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L  +     F  D++L R  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKILTRA-IPWESK 266


>gi|296269302|ref|YP_003651934.1| binding-protein-dependent transporter inner membrane component
           [Thermobispora bispora DSM 43833]
 gi|296092089|gb|ADG88041.1| binding-protein-dependent transport systems inner membrane
           component [Thermobispora bispora DSM 43833]
          Length = 260

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 19/175 (10%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P +  ++++P L +L+  V++F           E   ++ +  + +  +  S   ++
Sbjct: 100 LLGPPVTFVRTLPPLAYLSLLVIWFGI--------DEEPKVWLLLIAALPPVAVSTADAV 151

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  D    +RS  +  WQ  W + +P ++P ++  + +++   +  VVA+E      T
Sbjct: 152 RGVHEDYLNAARSLGVPRWQLPWRVVLPSALPEILTGIRVAVGVAYTSVVAAE------T 205

Query: 219 VIPLPGIGSYIALAIK--EQD--LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           V  +PGIG  I  A +  + D  +L IL   L+ L + FL  Q L R ++ W  +
Sbjct: 206 VNGIPGIGGMIRDAQRYNQTDVVILGILIIGLSGLLIDFLL-QTLDRRLVPWRGR 259


>gi|218670848|ref|ZP_03520519.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli GR56]
          Length = 259

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 92  IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 151

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 152 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 203

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 204 VQVMSGGQSASVALMMKNQ 222


>gi|167031930|ref|YP_001667161.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166858418|gb|ABY96825.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 237

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168

Query: 198 MSMS 201
           ++++
Sbjct: 169 VALA 172


>gi|71910767|ref|YP_282317.1| phosphate transporter permease [Streptococcus pyogenes MGAS5005]
 gi|71853549|gb|AAZ51572.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 272

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   V+  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 85  LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 143

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 144 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 203

Query: 215 VGDTVIP 221
               V+P
Sbjct: 204 GNSAVMP 210


>gi|332653563|ref|ZP_08419308.1| putative alkanesulfonate transport protein (ABC superfamily,
           membrane) [Ruminococcaceae bacterium D16]
 gi|332518709|gb|EGJ48312.1| putative alkanesulfonate transport protein (ABC superfamily,
           membrane) [Ruminococcaceae bacterium D16]
          Length = 255

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  +++ A P   F  LV+  V  Y     + +  LM+    W    NV  G        
Sbjct: 96  PVIRMIRAVPVVSFILLVMLAV--YRSTVPMVIVTLMVLPVVWS---NVKQGIGQADRQL 150

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            E+  ++  + W+  + I LP I PY+++   T  G AW + + +EV
Sbjct: 151 LELGRAYRFSRWKKVKLIYLPSIQPYFLSAVTTGMGLAWKSGVAAEV 197


>gi|295698942|ref|YP_003606835.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295438155|gb|ADG17324.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           F F+  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G ++       F
Sbjct: 109 FAFMLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------F 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  + +W +  + Y    ++P  L+   R++ L+G +    + VP ++P ++  + +  
Sbjct: 160 VLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALPSILAGLRVGW 219

Query: 201 SGGWFFVVASEMI 213
           +  W  ++A+E++
Sbjct: 220 AFAWRTLIAAELV 232


>gi|253687794|ref|YP_003016984.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754372|gb|ACT12448.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 257

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V     
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GA A     +     VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +++LP   P   T    A G  W + I +E+ +       T+G+G
Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++ + +  R LSA  ++++       L   S  +  V  P +  ++ +P +  +   
Sbjct: 57  SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV+         IG E +  F IF +   ++      ++  + R    V+++   S  Q 
Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQI 168

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F+++ +P ++P L   + +++  GW  ++A+EM+
Sbjct: 169 FFHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMV 202


>gi|218462052|ref|ZP_03502143.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli Kim 5]
          Length = 302

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ A + A+       M   ++ +L  I R L E +R    SGWQ  W + +P + PG  
Sbjct: 171 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 228

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+ G  FVV   M       +   G  + +AL +K Q
Sbjct: 229 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 265


>gi|218779567|ref|YP_002430885.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
 gi|218760951|gb|ACL03417.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
          Length = 277

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 27/194 (13%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + TTL M LSA++   L       LA +S +    L P LD MQ+ P   +L   V+ F 
Sbjct: 90  AMTTLAMVLSAVIFCTLVGAPLGILAGRSDKFESWLRPFLDAMQTTPAFVYLVPIVMLF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     +FA+    +  +T      +  +  +L E +++F  + WQ    + 
Sbjct: 149 --SVGNVAGVLSTIVFAM--PPIIRLT---SLGIRGVHPELVEAAQAFGATNWQVLVRVQ 201

Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +P ++P    GL   +MM++S     VV + +I  G       G+GS + L +   D   
Sbjct: 202 IPLALPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVILGLNTLD--- 247

Query: 241 ILYAMLTMLGVIFL 254
           I  A++  LG++ +
Sbjct: 248 IGQAVIGGLGIVLM 261


>gi|152980281|ref|YP_001352431.1| sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151280358|gb|ABR88768.1| sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 276

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 19/167 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+        +       L+  G  + +  N   G  +      E+
Sbjct: 120 QMIRNIPALALIPLVILWFGIEETSKIF----LVAVGVFFPVYLNTFHGIRSVDKGLIEM 175

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GW  +R +ILPG  P  + G   + G  W   IV+E  S        +G+G  
Sbjct: 176 AKSYGLSGWSLYRDVILPGALPSILVGVRFSLGLVWVLLIVAETIS------AQSGIGYM 229

Query: 543 IAESTEKGSFPEVVLGVL---IMCCFVLALNRFL------WHPLYLY 580
              + E      V++G+L   ++      ++R L      WHP Y +
Sbjct: 230 TMNAREFLQTDVVLVGILLYALLGKLADVVSRTLEGYWLRWHPGYRH 276


>gi|126733602|ref|ZP_01749349.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. CCS2]
 gi|126716468|gb|EBA13332.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. CCS2]
          Length = 269

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 18/157 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158
           LVP++  +  IP +  L   V++F         G + A+ +A+     +  T  + Y ++
Sbjct: 112 LVPLVAAIFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 162

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS +     + +P +MPG++  + +S++     +VA+EM+  G  
Sbjct: 163 DNVDRSLIRMGQSFGLSWFSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 220

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIF 253
                GIG+YI  A    DL  +     +L++LGVI 
Sbjct: 221 Y----GIGAYILQAGSLYDLERLFAGVVILSLLGVIL 253


>gi|326772164|ref|ZP_08231449.1| glycine betaine/L-proline ABC transporter, permease protein
           [Actinomyces viscosus C505]
 gi|326638297|gb|EGE39198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Actinomyces viscosus C505]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A V +L+F       AA+++ +  ++ P+LD+MQ++P   +L  +V++F + + PG    
Sbjct: 104 ATVTALIFAIPLGIWAARNKYVSALVRPVLDLMQTMPAFVYLIPSVLFFSIGVVPG---- 159

Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   +F + ++ M   +  +   +  + ++  E  RSF  + WQ    + +P ++P
Sbjct: 160 --------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVP 211



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 9/132 (6%)

Query: 381 WLGCITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W   +    +V L  + ++I+ IP+GIW     ++S+ ++P   L+   PA V+    + 
Sbjct: 91  WTNAMETLVLVTLATVTALIFAIPLGIWAARNKYVSALVRPVLDLMQTMPAFVYL---IP 147

Query: 440 CVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
            V ++ +   P ++ +L  IF     +    + G      +  E   SF  T W+  R I
Sbjct: 148 SVLFFSIGVVPGMFATL--IFAMPPGVRMTEL-GIKQVDKETVEAGRSFGATDWQILRGI 204

Query: 498 ILPGIFPYYVTG 509
            LP   P  + G
Sbjct: 205 QLPLAVPTIMAG 216


>gi|283853439|ref|ZP_06370683.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
 gi|283571159|gb|EFC19175.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
          Length = 263

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP G+ +G    +S  + P  +LL          ++ + + ++ +   + L  +++F   
Sbjct: 82  IPCGLAMGVSRRLSGLLTPTVELLRP---VPPPAIIPAAMLFWGIGLGMKL-FVVVFACF 137

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL   + GA      F+  A+++  T W     +ILP   P    G  TA   A   +
Sbjct: 138 FPILVGAVDGARGVAPGFRLTAAAYGATRWDMLARVILPAAGPSVAAGFRTAVPMALIVA 197

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++SE+         T G+G YI       + PE+  GV+++    LA+N
Sbjct: 198 VLSEMIG------ATGGIGHYILRMERTFAIPEMYAGVVMLGIMGLAVN 240


>gi|227524816|ref|ZP_03954865.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088031|gb|EEI23343.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 309

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 75  AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127
           A VIS  F   T VY T     +R   +L P+ +++  IP  + GF+  +VV  +  N++
Sbjct: 98  AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 156

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+  F +F   +  +      SL ++P    + S +   + WQ  W + +  
Sbjct: 157 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + PG++  ++  M+  +   +A +M++   +++P
Sbjct: 216 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 249


>gi|89053964|ref|YP_509415.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863513|gb|ABD54390.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 283

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TLR+ + A++I+++     A L A+S+   M   P   I+Q  PI+       +Y  N  
Sbjct: 83  TLRITMLALLIAIVGGVGLAILFAQSKFAEMSFSPFAVILQVTPIVSIAPLIFIYIENRL 142

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G ++ A + A F +      N T  +  +  N+ RDL  +   +R S WQ+  +L +P 
Sbjct: 143 VGLLLCAWIVAFFPVLA----NTTLGLKSADHNL-RDLFSI---YRASRWQRLVHLQLPS 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           ++P  +    + ++GG   + A    VV + V    G+ S +A  I E
Sbjct: 195 ALPYFLGG--LKIAGGLALIGA----VVAEYVAGSGGLASGLAFRILE 236


>gi|77456438|ref|YP_345943.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380441|gb|ABA71954.1| putative ABC sulfur transport system, membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 532

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    VL P L  ++ I I  ++     +F      K +   LAA F +F +       
Sbjct: 366 SRTSERVLGPTLAALRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLFVAT------ 419

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
              +S+ N+   L E ++  RLS  Q+   L +P + PG+   + +S+   W   + +E 
Sbjct: 420 --QRSVANLSPQLNEAAQVLRLSLAQRLLRLVLPGAAPGIFAGLRLSLIYAWLGTIGAEY 477

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            +  +      GIGS +   I  Q LL +   M  ML
Sbjct: 478 FMPSNG-----GIGSQM---IGAQQLLRMDLIMAGML 506


>gi|307130433|ref|YP_003882449.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306527962|gb|ADM97892.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 569

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 17/218 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SLP     +  R L    + +    +       S R   V  P L +++ + +  +L   
Sbjct: 366 SLPDAMRHSLWRALVGGALGVSAGLLAGLALGLSTRAEAVFTPTLTLLRQVALFAWLPLI 425

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +  N   GKV    L A F         M  + ++ +      L+EV++  RL  + +
Sbjct: 426 TAWVGNDDGGKVTFIALVAFFP--------MLVATHRGVRQRSLALQEVAQVLRLPWFHR 477

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P + P L   + ++M   W   + +E  +         GIGS +  A +  D+ 
Sbjct: 478 LRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA-----GIGSLMINAQQLLDMP 532

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
            IL  ML +     L+D L  R       +    RTTG
Sbjct: 533 IILSGMLLIGVTGALFDHLGQR----LEQRMTRWRTTG 566


>gi|146282188|ref|YP_001172341.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145570393|gb|ABP79499.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|327480437|gb|AEA83747.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 257

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEK 549
           W+  R + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S E 
Sbjct: 166 WQLLRRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGQ------GLGRSLAYSGEI 219

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                V++ +L++      +++ +   L  +  R LR
Sbjct: 220 ADMVGVMMNILVIAILATLIDQVV---LEKFKQRMLR 253


>gi|56697293|ref|YP_167659.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679030|gb|AAV95696.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 343

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 77/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +++ RL  + +PILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 176 SRNDRLQRMTIPILDMLQTLPSFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVIRLTDL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      + RD+ E + SF ++  QK + + +P ++P    G+   +MMS++     
Sbjct: 235 GIRL------VDRDVIEAADSFGMTDRQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309


>gi|21910416|ref|NP_664684.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28895992|ref|NP_802342.1| phosphate ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904614|gb|AAM79487.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28811242|dbj|BAC64175.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 311

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +L P ++++  IP  + GF+   V+  FM    G      L+ +  +F   +  +TF   
Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMILPTVTFMTT 183

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V 
Sbjct: 184 DSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVG 243

Query: 216 GDTVIP 221
              V+P
Sbjct: 244 NSAVMP 249


>gi|307329513|ref|ZP_07608673.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306884818|gb|EFN15844.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 301

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 17/207 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+++   +     +++  +    R +   L P+LD +  +P L  L      F+N++
Sbjct: 104 TLQRVVAGYALGTAAGYLFGLVMGALRMVRAALEPLLDALYVVPKLALLPV----FLNMF 159

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G ++A +       VW    S   ++  +     E  + F    WQ F ++ +P 
Sbjct: 160 -GLGEGPQIALVATTVFFFVW---ISTMAAVMGVAEGYREAGQVFGAGPWQMFRHVLLPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245
           S+P ++  M ++       +VASE I   D      G+G  I  +  + + D++ +    
Sbjct: 216 SLPQVLVGMRVASGVAVLVIVASEQIAAND------GLGHLIFDSRTLFQNDVMFVGIVC 269

Query: 246 LTMLGVIFLY-DQLLFRPMIVWSNKFR 271
           + +LGV+F    + + R +  W+ + R
Sbjct: 270 VAVLGVVFSELVRFIGRRLTPWAPRDR 296


>gi|299538418|ref|ZP_07051701.1| glycine betaine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298726005|gb|EFI66597.1| glycine betaine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 284

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           +KS     ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 122 SKSTVAENIIKPILDFMQTMPGFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRMTN 178

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +P++L E + S+  +  QK + + +P +    M G+   +M+S+S    
Sbjct: 179 L------GIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLSLS---- 228

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++   +
Sbjct: 229 ------MVVIA-SMIGAPGLGREVLTALQRTQV 254


>gi|260426263|ref|ZP_05780242.1| choline ABC transporter, permease protein [Citreicella sp. SE45]
 gi|260420755|gb|EEX14006.1| choline ABC transporter, permease protein [Citreicella sp. SE45]
          Length = 278

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   +L   L PILD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 118 AAHRPKLYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   Y  + + P+ L E + +F  +  Q  + + +P+++P    GL   +M+S+S
Sbjct: 172 RLT---YLGVSSTPKPLLEAATAFGATSSQTLFKVELPYAVPQIMAGLNQTIMLSLS 225


>gi|239916800|ref|YP_002956358.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|281414739|ref|ZP_06246481.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|239838007|gb|ACS29804.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
          Length = 289

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +  P++  ++++P L ++   +++       KV    + A F +FT+       
Sbjct: 125 SRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTT------- 177

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +Y +L ++   L E  R+F   G      + +P  +P +   + ++++  W F+VA+E+
Sbjct: 178 -VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAEL 236

Query: 213 IV 214
           I 
Sbjct: 237 IA 238


>gi|146276830|ref|YP_001166989.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555071|gb|ABP69684.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 270

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 8/152 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L  +A  T  R+ +   + +    +   +   SR    +L P L  +++IP + ++   
Sbjct: 67  ALADHAMATLGRVGAGFGVGVAAGTLAGAVTGYSRLASRLLDPSLQALRAIPSIAWVPLF 126

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F      K++   +   F ++          +  ++  + R + EV R +RLSG   
Sbjct: 127 ILWFGIFETSKIVLIAVGVFFPVY--------LGLMAAIRCVDRKIVEVGRIYRLSGPAM 178

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
              + +P  +P  V  +   +  GW FVVA+E
Sbjct: 179 VGRILLPAVLPAYVTALRSGLGLGWMFVVAAE 210


>gi|90422365|ref|YP_530735.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90104379|gb|ABD86416.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 255

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L ML   V +LL           SR L + + P++     IP    L   ++ F   
Sbjct: 67  RLALGMLLGGVPALLLGLAMGI----SRPLRVAIDPLISATYPIPKSAILPLVLLIFGLG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV+   L A + I  + +          + N+ R   +V  +FR S WQ F  + +P
Sbjct: 123 ELSKVVMVALGAFYPIVINTM--------VGVVNLDRIYLDVGHNFRASRWQVFRTIALP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            ++P ++  + ++   G   +  SEM+   D +
Sbjct: 175 GALPSIMAGIKLAAGMGLILIAISEMVASNDGI 207



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 4/130 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +++  +  + +G+ +G    +   I P        P +   PLV+       
Sbjct: 64  SLRRLALGMLLGGVPALLLGLAMGISRPLRVAIDPLISATYPIPKSAILPLVLLIFGLGE 123

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  + ++L    G  + I+ N + G       + +V  +F  + W+ +R I LPG  P 
Sbjct: 124 LSKVVMVAL----GAFYPIVINTMVGVVNLDRIYLDVGHNFRASRWQVFRTIALPGALPS 179

Query: 506 YVTGAITACG 515
            + G   A G
Sbjct: 180 IMAGIKLAAG 189


>gi|323488305|ref|ZP_08093554.1| ABC transporter permease protein [Planococcus donghaensis MPA1U2]
 gi|323398057|gb|EGA90854.1| ABC transporter permease protein [Planococcus donghaensis MPA1U2]
          Length = 558

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY--ILFNVIAGASAFPNDFKEVAS 484
            F  N+F  + +   S Y L+  +W     +F  Q+Y  I   V           +E + 
Sbjct: 135 GFITNLFANIGIDIPSIYGLHGMVW-----VFSLQFYPHIYLYVSGALKTIDTSLEEASE 189

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAI 511
           S  I+GWR  R + LP IFP   TGA+
Sbjct: 190 SLGISGWRRIRKVTLPLIFPTVSTGAL 216


>gi|320534785|ref|ZP_08035206.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133006|gb|EFW25533.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q A  T + +  A + +L+F       A++++ + +++ P+LD+MQ++P   +L  +V++
Sbjct: 92  QNAMETLVLVTLATLTALVFAIPLGIWASRNKYVSVLIRPVLDLMQTMPAFVYLIPSVLF 151

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178
           F + + PG            +F + ++ M   +  +   +  + ++  E  RSF  + WQ
Sbjct: 152 FSIGVVPG------------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQ 199

Query: 179 KFWYLGVPFSMP 190
               + +P ++P
Sbjct: 200 IMRGIQLPLAVP 211


>gi|297192568|ref|ZP_06909966.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151399|gb|EDY62016.2| glycine betaine ABC transporter integral membrane protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 681

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           ++L+A+V++L    +   L A++ RL   L P+LD MQ++P   +L   V  F       
Sbjct: 501 QVLAALVVTLFLGVLAGILCARAGRLERWLRPVLDAMQTMPQFVYLIPVVALFGV----- 555

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A ++AI A     +  +     Q L  +     E SRS   S  Q+   + +P + P
Sbjct: 556 ---ARVSAIVAAVVYALPAVVRITAQGLREVDPAALEASRSLGASTRQQLLRVQLPLARP 612

Query: 191 GL 192
            L
Sbjct: 613 AL 614


>gi|327189415|gb|EGE56582.1| spermidine/putrescine ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 301

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 134 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 193

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 194 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 245

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 246 VQVMSGGQSASVALMMKNQ 264


>gi|153949190|ref|YP_001399348.1| ABC aliphatic sulfonates ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|167466455|ref|ZP_02331159.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis FV-1]
 gi|170022674|ref|YP_001719179.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|152960685|gb|ABS48146.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pseudotuberculosis IP 31758]
 gi|169749208|gb|ACA66726.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
          Length = 264

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      V   +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI   L E++RS+ LSG++    
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            +   +  +LG   L D   QLL R  + W   ++
Sbjct: 225 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 257



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G+  G        +    Q++   P     PLV+    +
Sbjct: 63  TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G Y+A +  +    +VV+  +++ 
Sbjct: 179 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 231

Query: 564 CFVLALNR----------FLWHPLY 578
             +  L              WHP Y
Sbjct: 232 ALLGKLADGSAQLLERVWLRWHPAY 256


>gi|154499091|ref|ZP_02037469.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC
           29799]
 gi|150271931|gb|EDM99157.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC
           29799]
          Length = 304

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/167 (19%), Positives = 72/167 (43%), Gaps = 10/167 (5%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+  G+ P +   + P A++L+  PA ++ P +++ +  +        +L++I G  W 
Sbjct: 134 LGMLAGWSPRLRGFLVPIARVLSPVPAIIYAPYLIALMPSFRSAS----ALVIILGIFWP 189

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                +           + A    ++       I LP + P  ++G   +   ++    +
Sbjct: 190 TFLQTVGRTVGLDPHILDSARVLCLSDREMVFQIFLPALLPGLISGLRVSLSTSFMLLTL 249

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +E+         T+GLG +I    +  ++  V+ G+L++   V ALN
Sbjct: 250 AEMMG------ATSGLGYFIKNFADYANYTNVIAGILLVALVVTALN 290


>gi|91783643|ref|YP_558849.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia xenovorans LB400]
 gi|91687597|gb|ABE30797.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia xenovorans LB400]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++     FV  +LA  S RLG  ++ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGAALAFVLTSLAV-STRLGRDVLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  + Y    ++P  L    R++ L+G +    + VP ++P
Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIRHVLLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 AILAGLRVGWAFAWRTLIAAELV 232


>gi|296159209|ref|ZP_06842035.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890468|gb|EFG70260.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++     FV  +LA  S RLG  ++ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGAALAFVLTSLAV-STRLGRDVLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  + Y    ++P  L    R++ L+G +    + VP ++P
Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIRHVLLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 AILAGLRVGWAFAWRTLIAAELV 232


>gi|269964845|ref|ZP_06179082.1| ABC transporter permease protein [Vibrio alginolyticus 40B]
 gi|269830505|gb|EEZ84727.1| ABC transporter permease protein [Vibrio alginolyticus 40B]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266


>gi|229048488|ref|ZP_04194051.1| ABC transporter permease protein [Bacillus cereus AH676]
 gi|228722853|gb|EEL74235.1| ABC transporter permease protein [Bacillus cereus AH676]
          Length = 191

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 24/172 (13%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           IIA+ +W     W+   P ++  + P+  +L A P     P+++         PN+  S+
Sbjct: 17  IIATFLW-----WM---PLLARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNISSSI 63

Query: 455 LMIFGTQWYILFNVIAGASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            M  G    I+  ++   SAF    +++ +V  +F    W+ ++ ++LP  FP  ++   
Sbjct: 64  AM--GVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLK 121

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              G +W   I      +G + +   GLG  I+   +  +F  ++L VL+ C
Sbjct: 122 VNVGLSWVGVI------FGELLVSKQGLGYLISYGFQVFNFTLILLSVLLTC 167


>gi|163759394|ref|ZP_02166480.1| hypothetical protein HPDFL43_06500 [Hoeflea phototrophica DFL-43]
 gi|162283798|gb|EDQ34083.1| hypothetical protein HPDFL43_06500 [Hoeflea phototrophica DFL-43]
          Length = 283

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T ++Y SL  I   L   +R    S WQ FW +  P S+PG+V         G F +V  
Sbjct: 169 TLTIYASLARINPKLILAARDLGASQWQTFWRVIFPLSIPGVV--------AGVFLIV-- 218

Query: 211 EMIVVGDTVIP 221
            +I +GD V P
Sbjct: 219 -VITIGDYVTP 228


>gi|116687129|ref|YP_840376.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|116652844|gb|ABK13483.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 288

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456
           VG  +G    I +  +P  Q L A P+  + P+++           LWL +       L+
Sbjct: 106 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 154

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + +   V+AG         E+ + + +     +R I+LP   P  VTG  T    
Sbjct: 155 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 215 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 247



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +I+D +   + V  + ++   +TLR+ +          V       SRR+  +  P 
Sbjct: 65  APSEILDTL-ARMGVIRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 123

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       K+    L AI A F         ++   + ++ R
Sbjct: 124 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 175

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 176 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 227


>gi|107029257|ref|YP_626352.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|105898421|gb|ABF81379.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
          Length = 285

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +I+D +   + V  + ++   +TLR+ +          V       SRR+  +  P 
Sbjct: 62  APSEILDTL-ARMGVIRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 120

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              +++IP L ++   +++       K+    L AI A F         ++   + ++ R
Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I  
Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456
           VG  +G    I +  +P  Q L A P+  + P+++           LWL +       L+
Sbjct: 103 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             G  + +   V+AG         E+ + + +     +R I+LP   P  VTG  T    
Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           AW   + +E+ +       T GLG  +++  E G  P++V
Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 244


>gi|153832682|ref|ZP_01985349.1| ABC transporter permease protein [Vibrio harveyi HY01]
 gi|148871027|gb|EDL69911.1| ABC transporter permease protein [Vibrio harveyi HY01]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KKAIPWESK 266


>gi|15598708|ref|NP_252202.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9949659|gb|AAG06900.1|AE004771_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 258

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 11/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT   +VV   + +++ + +G+ +G  P   + + P+   L   P   F PL V  +  
Sbjct: 60  AITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLG- 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           Y + P + +++L++F   + ++ NV++       D   +  +   + W+ +R +  P   
Sbjct: 119 YTVYPKILIAVLIVF---FPVMINVLSAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAM 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               +G   A   A     V E+           GLG  + ++  +G+   V + ++++ 
Sbjct: 176 AALFSGLRIASTLAVIGVTVGELVG------GNKGLGFLLVDAEGQGNTAGVFVAIVMLT 229

Query: 564 CF-VLALNRFLW 574
              VLA    +W
Sbjct: 230 LIGVLAYGAVVW 241


>gi|87119552|ref|ZP_01075449.1| putative permease of ABC transporter [Marinomonas sp. MED121]
 gi|86165028|gb|EAQ66296.1| putative permease of ABC transporter [Marinomonas sp. MED121]
          Length = 267

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T + ++SA  IS+L        AA    L  ++ PILD+MQ+IP   +L  T++ F + 
Sbjct: 81  QTLVLVVSATFISVLIGVPLGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLILFGLG 140

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG +       IFA+  +    +T   Y  +  +P +L E   +F  +  +  + + +
Sbjct: 141 YVPGLI----STIIFAV--AAPIRLT---YLGISKVPNELIEAGLAFGCTKSKLLYKVEL 191

Query: 186 PFSMP----GLVWNMMMSMS 201
           P +MP    G+   +M+S+S
Sbjct: 192 PAAMPNIMAGITQCIMLSLS 211


>gi|298247045|ref|ZP_06970850.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297549704|gb|EFH83570.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 18/193 (9%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL-----DIMQSIPILGFLTFTVVYFMNL 126
           ML ++V+     +  A L  K ++ GM+L  ++      IM ++P+  F+ F+ +  +N 
Sbjct: 97  MLLSLVLGAPMAYGLARLPVKGKQ-GMLLAFLVVQMFPSIMLALPL--FVIFSQIGLVNS 153

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A I A+ T  +   T  M     ++PRDLE+ +     S W  F+ + +P
Sbjct: 154 IP--------AVILAVTTRTLPFATLVMRPYFLSLPRDLEDAAFIDGCSLWGAFYRIIMP 205

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIA-LAIKEQDLLAILYA 244
            S PG++    ++   GW   +    ++  D   PL  GI  +I    ++  DL+A+   
Sbjct: 206 LSRPGILTVGALTFLMGWSDFLFPLTLISDDNKRPLTLGIYKFIGEYGVRWNDLMAVSVV 265

Query: 245 MLTMLGVIFLYDQ 257
               + ++F++ Q
Sbjct: 266 AALPIILVFIFGQ 278


>gi|290955278|ref|YP_003486460.1| glycine betaine ABC transporter transmembrane protein [Streptomyces
           scabiei 87.22]
 gi|260644804|emb|CBG67889.1| putative glycine betaine ABC transport system integral membrane
           protein [Streptomyces scabiei 87.22]
          Length = 672

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L +  L Q +  T    +SA++++LLF       A  S R+  +  P+LD MQ++P   +
Sbjct: 155 LGLQGLWQESMDTLALTVSAVLVALLFGIPLGVWAGLSDRVNRIATPLLDFMQTMPTFVY 214

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L    ++F+       IG   A I  +  +    +  + + ++  +P    E + S   +
Sbjct: 215 LAPLTLFFL-------IGGASATIATVVYAAPPAIRITAH-AIRTVPETTVEAADSLGAT 266

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P S   +V  +  +       ++A+  +V    +I  PG+G  +  A++ 
Sbjct: 267 RRQALLKVLLPMSKRTVVMGVNQT-------IMAALAMVTIAALIDAPGLGKTVVQALQS 319

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+     A L+++ +  + D++
Sbjct: 320 LDVGTAFNAGLSIVVMAIVLDRV 342


>gi|284032816|ref|YP_003382747.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283812109|gb|ADB33948.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 279

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           TF M Q   +IP +LEE +R    + WQ FW + +P + PGL+   ++++   W
Sbjct: 157 TFLMMQFFKSIPAELEEAARLDGCNPWQTFWKVVLPVAKPGLISLAIITVLASW 210


>gi|156978036|ref|YP_001448942.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Vibrio harveyi ATCC BAA-1116]
 gi|156529630|gb|ABU74715.1| hypothetical protein VIBHAR_06840 [Vibrio harveyi ATCC BAA-1116]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KKAIPWESK 266


>gi|154492129|ref|ZP_02031755.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC
           43184]
 gi|154087354|gb|EDN86399.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC
           43184]
          Length = 469

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 16/171 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    T LR    M ISL+     + L  K   +  +  P+L IM+SIP++ F+   +++
Sbjct: 61  QSVMATVLRGTIGMSISLMAAMGVSLLFYKCEWIYELFRPLLAIMRSIPVISFILLALIF 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                    + AE   +   F +    +T ++ + +    ++   ++R FR+  W K   
Sbjct: 121 ---------LNAESIPLIIAFLTMFPLLTENLTKGIRGQRKEFSIMARQFRIGRWNKLTQ 171

Query: 183 LGVPFSMPGLVWNMMMSMSG-GWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           +  P   P  +++ + S SG GW  ++  E++         PGIG  +  A
Sbjct: 172 VVYPQLKP-FLYSGLASASGFGWRAIIMGEVLAQCS-----PGIGGEMKQA 216


>gi|120404386|ref|YP_954215.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119957204|gb|ABM14209.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
          Length = 271

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RVV  +I+  +I I +G  +G      + + P  Q++ A P     PL +     
Sbjct: 80  TVSGLRVVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMVRALPHLGLIPLFIIWFGI 139

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L P +   LL+  G  + +  N  +          E A     + W+ +R II+P   
Sbjct: 140 GEL-PKV---LLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRSIIVPSAA 195

Query: 504 PYYVTGAITACGGAWNASIVSE 525
           P  + G   +   AW   IV+E
Sbjct: 196 PQVLVGLRQSLAIAWLTLIVAE 217


>gi|254252109|ref|ZP_04945427.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124894718|gb|EAY68598.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 291

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465
           IG    +   + P  ++L   PA  + PL +       + P+  LS++ I   G  + IL
Sbjct: 118 IGRYRALEDALLPPLEVLRPIPAVAWIPLAIL------MFPSSELSMMFITFVGALFPIL 171

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N + GA A        A S    G+  +  +ILPG  P   TG     G AW   + +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           + +  +      G+G +   S    ++P++V+G+ ++
Sbjct: 232 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            + R L   L+P L++++ IP + ++   ++ F +        +EL+ +F  F   ++ +
Sbjct: 119 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +
Sbjct: 171 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 230

Query: 211 EMIV 214
           EMI 
Sbjct: 231 EMIA 234


>gi|91975513|ref|YP_568172.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91681969|gb|ABE38271.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 550

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G+ L    A+    +  M F +Y ++  I R L   S+S   +GW  FW +  P S+PG+
Sbjct: 146 GSTLGVTIAMVQIMLPFMIFPLYSTMVGIDRRLNVASKSLGANGWTTFWRVYWPLSLPGV 205

Query: 193 V 193
           V
Sbjct: 206 V 206


>gi|121593479|ref|YP_985375.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax sp. JS42]
 gi|120605559|gb|ABM41299.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax sp. JS42]
          Length = 400

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 32/191 (16%)

Query: 73  LSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ ++ SLLF  V       + A S R      P+LD MQ+ P   +L   V+ F     
Sbjct: 177 LALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI--- 233

Query: 129 GKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G V G  +  +FA+    ++ N+       L  +  DL E SR++  S  Q  W + +P 
Sbjct: 234 GNVPGVIVTIVFALPPLVRLTNL------GLRQVRPDLIEASRAYGASPLQLLWKVQLPL 287

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +MP    G+   +M+S+S     VV + MI VG       G+G  +   I   D+     
Sbjct: 288 AMPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GL 333

Query: 244 AMLTMLGVIFL 254
           A +  LG++ L
Sbjct: 334 ATVGGLGIVLL 344


>gi|227510656|ref|ZP_03940705.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190308|gb|EEI70375.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 309

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 75  AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127
           A VIS  F   T VY T     +R   +L P+ +++  IP  + GF+  +VV  +  N++
Sbjct: 98  AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 156

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+  F +F   +  +      SL ++P    + S +   + WQ  W + +  
Sbjct: 157 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + PG++  ++  M+  +   +A +M++   +++P
Sbjct: 216 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 249


>gi|225388708|ref|ZP_03758432.1| hypothetical protein CLOSTASPAR_02444 [Clostridium asparagiforme
           DSM 15981]
 gi|225045220|gb|EEG55466.1| hypothetical protein CLOSTASPAR_02444 [Clostridium asparagiforme
           DSM 15981]
          Length = 280

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 12/140 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T L +   ++++L   + +  L+ K RR G+ L+ I+ ++Q   +     + V+  ++L
Sbjct: 85  QTGLAVAGQLLVALPAAWAFGALSFKGRR-GLFLIYIILMLQPFQVTMVPNYLVLKRLSL 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNM--TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    L +  A+     W+    F M +    IPR L E +       W  FW +G
Sbjct: 144 ---------LNSHLAVILPAAWSAFPVFIMAKFFETIPRPLMEAAGLDGAGSWMIFWKIG 194

Query: 185 VPFSMPGLVWNMMMSMSGGW 204
           VP   PG+V  M++ +   W
Sbjct: 195 VPIGKPGIVSAMVLGVLETW 214


>gi|229543164|ref|ZP_04432224.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229327584|gb|EEN93259.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 260

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 34/212 (16%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R V   +I   I   +G+  G        +    Q+L   P     PLV+      
Sbjct: 64  ISLLRAVTGFLIGGSIGFILGLVNGLFRTSELLLDTSVQMLRTIPHLALIPLVI------ 117

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LW  +       L+  G  + +  N   G  +  N   E+   + + GWR + ++
Sbjct: 118 -----LWFGIGEEAKIFLVALGVLFPVYLNTFHGIKSVDNGLIEMGKIYGLKGWRMFAHV 172

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I PG     + G   + G  W   IV+E  S       T+G+G     + E      ++L
Sbjct: 173 IFPGSLSSILVGIRFSLGVMWITLIVAETIS------STSGIGYMAMTAREFMQMDVILL 226

Query: 558 GVLIMCCFVL---ALNRFLWHPLYLYGTRCLR 586
            +L+   F     A+ RF       +  RCL+
Sbjct: 227 SILLYALFGKLSDAIARF-------FEKRCLK 251


>gi|269959816|ref|ZP_06174194.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835429|gb|EEZ89510.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266


>gi|237808099|ref|YP_002892539.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
 gi|237500360|gb|ACQ92953.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
          Length = 299

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           F  YQ   +IP+D +E +     + WQ +W + VP S P      ++     W   +   
Sbjct: 179 FLFYQFFRDIPKDFDEAAAIDGATPWQIYWKVIVPMSGPVFATVAILQFLNMWNQYLWPI 238

Query: 212 MIVVGDTVIPL-PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           M+V G+   PL PGI  +     +  +++A  YA +  + V+ ++  LLF+   V S
Sbjct: 239 MVVQGEAARPLQPGIQQFFGTTTEWGEIMA--YASMVTIPVLIMF--LLFQKKFVRS 291


>gi|218678225|ref|ZP_03526122.1| ABC transporter, membrane spanning protein [Rhizobium etli CIAT
           894]
          Length = 222

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 65  ASRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           AS  TL +++  V IS+L  F    LA++ R+    + P+LDIMQ++P   +L   V+ F
Sbjct: 28  ASMQTLALVTVSVCISVLIAFPLGILASRYRKFEAAIRPVLDIMQTVPPWVYLIPAVMIF 87

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G+V      AI A     V  M      +   +P+DL E+ ++   S     + +
Sbjct: 88  SL---GRV-----PAIIATIVYGVPPMLRLTTLAFSQVPKDLLELGQATGASPRAILFKI 139

Query: 184 GVPFSMPGLVWNM 196
            +P + P L+  +
Sbjct: 140 EIPAATPTLLVGL 152


>gi|86608833|ref|YP_477595.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557375|gb|ABD02332.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 257

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 19/185 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A  ++L+   +  ++   SR   + L P+L    +IP +  +    ++F +   P  VI 
Sbjct: 75  AFALALVGGILLGSIIGSSRLAHLCLYPLLVGFNTIPKVALVPLLAIWFGLGTIPA-VIT 133

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L A F I          ++   L  +  ++ +V RS   S W+ F  +G+P SMP L 
Sbjct: 134 AFLLAFFPI--------AVNVAVGLETVEAEMRDVLRSLGASSWEIFTKVGLPHSMPYLF 185

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-- 251
            ++ +++S   F  V S   V+ +TV    G+G  I  A    D + + +A L  LG+  
Sbjct: 186 ASLKVAIS---FAFVGS---VISETVASNQGLGYLIVSASSSFD-VPLAFAGLAALGIMG 238

Query: 252 IFLYD 256
           I LY 
Sbjct: 239 ILLYT 243


>gi|26987607|ref|NP_743032.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24982285|gb|AAN66496.1|AE016278_7 glycine betaine/carnitine/choline ABC transporter, permease
           protein, putative [Pseudomonas putida KT2440]
          Length = 247

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 119 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 178

Query: 198 MSMS 201
           ++++
Sbjct: 179 VALA 182


>gi|325576579|ref|ZP_08147297.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325161142|gb|EGC73257.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 245

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 15/160 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +   +L+PIL I Q+IP+       V++     P K++ A L   F +        T + 
Sbjct: 84  KTSSLLLPILVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYFPV--------TAAC 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           Y  L N P+   +++++F+ S W+    + +P ++P       +++S      VA    V
Sbjct: 136 YDGLRNTPQAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVS------VAPIGAV 189

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +G+ V    G+G Y+ +    +  + +++A L +L  I L
Sbjct: 190 IGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISL 228


>gi|298386614|ref|ZP_06996170.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           1_1_14]
 gi|298260991|gb|EFI03859.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           1_1_14]
          Length = 398

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150
           L PI++++  IP  + GF    V+      F +L  G+  + G+ + AI A+ T  +  +
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A 
Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326

Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            M+     VI      PL  I + IA  + E       Y  L +LGV+  +  L+    +
Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSV 386

Query: 265 VWSNKFRLERT 275
            + +   ++R+
Sbjct: 387 EYISSKGIKRS 397


>gi|295110029|emb|CBL23982.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ruminococcus obeum A2-162]
          Length = 273

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 31/60 (51%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G +       EVA  +H+  W+ + +I  P   P+ ++ +  A G +W + I++EV
Sbjct: 149 NTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFMPFVLSASKLALGMSWKSGIMAEV 208



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 84/174 (48%), Gaps = 17/174 (9%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR+    ++S +  F+ A +  + + +   L PI+ +++++P++ F+   +++       
Sbjct: 75  LRIAVGFILSFVAGFLLALVCHRFKLIRDFLEPIIVMLKTVPMISFVIMLLIW------- 127

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +G +   I+  F   +  +  +  Q L N+   L EV++ + ++ W+KF ++  P  M
Sbjct: 128 --VGNQALTIYLSFLIVLPIIYTNTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFM 185

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA 240
           P ++    +++   W   + +E  V+G    P P IG  +  A   ++  DL A
Sbjct: 186 PFVLSASKLALGMSWKSGIMAE--VIGT---PKPSIGREMYAAKSYLQTADLFA 234


>gi|254455113|ref|ZP_05068548.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198263523|gb|EDY87795.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 277

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           P+LD+MQ+IP   +L   ++ F + + PG +     A    I  +Q+          + +
Sbjct: 130 PVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFALPAPIRLTQL---------GITS 180

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            P  L E  +SF  +  Q  W + +P+++P    GL   +M+S+S
Sbjct: 181 TPTALIEAGKSFGSTPMQLLWKVELPYALPQIMAGLTQTIMLSLS 225


>gi|186897091|ref|YP_001874203.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|186700117|gb|ACC90746.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
          Length = 264

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      V   +   SR    +L   + +++++P L  +   +++
Sbjct: 60  QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI   L E++RS+ LSG++    
Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            +   +  +LG   L D   QLL R  + W   ++
Sbjct: 225 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 257



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G+  G        +    Q++   P     PLV+    +
Sbjct: 63  TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  
Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G Y+A +  +    +VV+  +++ 
Sbjct: 179 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 231

Query: 564 CFVLALNR----------FLWHPLY 578
             +  L              WHP Y
Sbjct: 232 ALLGKLADGSAQLLERVWLRWHPAY 256


>gi|332639110|ref|ZP_08417973.1| sugar ABC transporter permease [Weissella cibaria KACC 11862]
          Length = 271

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP-----ILGFLTFTVVYFMNLY 127
           L  +V S+L  F +A L    ++   VL  IL     +P     I  F+T + ++ +N Y
Sbjct: 79  LGQLVTSILAAFAFAKLNFSGKK---VLFTILLATMMVPGEMLIIPNFVTLSELHLVNTY 135

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G +I   LA+ FA+FT         + QS  ++P  L   +R    S WQ  W + VP 
Sbjct: 136 -GALIVPWLASFFAVFT---------LRQSFASVPDQLYYAARLDGASDWQFLWRVLVPN 185

Query: 188 SMPGLVWNMMMSMSGGW 204
           +   +    ++ + G W
Sbjct: 186 AKSTITAIGLLQIIGSW 202


>gi|22124163|ref|NP_667586.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45443650|ref|NP_995189.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597894|ref|YP_072085.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108809630|ref|YP_653546.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           Antiqua]
 gi|108813704|ref|YP_649471.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Nepal516]
 gi|145597549|ref|YP_001161625.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Pestoides F]
 gi|153997436|ref|ZP_02022536.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CA88-4125]
 gi|165927575|ref|ZP_02223407.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937418|ref|ZP_02225981.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166012001|ref|ZP_02232899.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214137|ref|ZP_02240172.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401992|ref|ZP_02307475.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167420559|ref|ZP_02312312.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167425472|ref|ZP_02317225.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|218930636|ref|YP_002348511.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           CO92]
 gi|229836766|ref|ZP_04456931.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Pestoides A]
 gi|229839334|ref|ZP_04459493.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229899898|ref|ZP_04515039.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229904210|ref|ZP_04519321.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Nepal516]
 gi|270488648|ref|ZP_06205722.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294505225|ref|YP_003569287.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Z176003]
 gi|21956920|gb|AAM83837.1|AE013624_6 putative transport system permease protein of aliphatic sulfonates
           ABC transporter [Yersinia pestis KIM 10]
 gi|45438520|gb|AAS64066.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51591176|emb|CAH22841.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777352|gb|ABG19871.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Nepal516]
 gi|108781543|gb|ABG15601.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Antiqua]
 gi|115349247|emb|CAL22214.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CO92]
 gi|145209245|gb|ABP38652.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Pestoides F]
 gi|149289073|gb|EDM39153.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CA88-4125]
 gi|165914523|gb|EDR33137.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920469|gb|EDR37746.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989085|gb|EDR41386.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204624|gb|EDR49104.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961365|gb|EDR57386.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048578|gb|EDR59986.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055486|gb|EDR65279.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229678328|gb|EEO74433.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Nepal516]
 gi|229687390|gb|EEO79465.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695700|gb|EEO85747.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229705709|gb|EEO91718.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Pestoides A]
 gi|262363287|gb|ACY60008.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis D106004]
 gi|262367334|gb|ACY63891.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis D182038]
 gi|270337152|gb|EFA47929.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355684|gb|ADE66025.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Z176003]
 gi|320017213|gb|ADW00785.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 265

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      V   +   SR    +L   + +++++P L  +   +++
Sbjct: 61  QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K+    L  +F I+         + Y  + NI   L E++RS+ LSG++    
Sbjct: 121 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239
           + +P ++P ++  +  ++   W        ++V +T+    GIG Y+A+  +E    D++
Sbjct: 173 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 225

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            +   +  +LG   L D   QLL R  + W   ++
Sbjct: 226 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 258



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G+  G        +    Q++   P     PLV+    +
Sbjct: 64  TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + ++ +  +  L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  
Sbjct: 121 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G Y+A +  +    +VV+  +++ 
Sbjct: 180 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 232

Query: 564 CFVLALNR----------FLWHPLY 578
             +  L              WHP Y
Sbjct: 233 ALLGKLADGSAQLLERVWLRWHPAY 257


>gi|302186133|ref|ZP_07262806.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 285

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R LS + I +    V A +   SRR  +VL   + ++++IP L  +   +++F       
Sbjct: 94  RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E   +  I     + +  +++  + NI   L E + +  LS  +  W++ +P S+P
Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
                +  S+   W  +V  E I
Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI 228


>gi|296159223|ref|ZP_06842049.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890482|gb|EFG70274.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A P  + EVA +F  + W+  R +ILP   P   TG   A   +W A++ +E     
Sbjct: 178 GIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 232

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  +G+G  + + +E+     V+ GV+++     ALN
Sbjct: 233 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALN 272



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 13/137 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  +        T 
Sbjct: 122 SRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPV--------TA 173

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
                +  +PR   EV+R+FR S WQ    + +P ++P +   + +++   W   + +E 
Sbjct: 174 HTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEY 233

Query: 213 IVVGDTVIPLPGIGSYI 229
           ++V  +     GIG+ +
Sbjct: 234 LLVAGS-----GIGNTL 245


>gi|325275909|ref|ZP_08141756.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324098959|gb|EGB96958.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 237

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168

Query: 198 MSMS 201
           ++++
Sbjct: 169 VALA 172


>gi|253572872|ref|ZP_04850270.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837504|gb|EES65597.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 398

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150
           L PI++++  IP  + GF    V+      F +L  G+  + G+ + AI A+ T  +  +
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A 
Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326

Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            M+     VI      PL  I + IA  + E       Y  L +LGV+  +  L+    +
Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSV 386

Query: 265 VWSNKFRLERT 275
            + +   ++R+
Sbjct: 387 EYISSKGIKRS 397


>gi|222086662|ref|YP_002545196.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221724110|gb|ACM27266.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 285

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +L++  + +L        AA+   L  ++ PILD+MQ+IP   +L   ++ 
Sbjct: 95  KETTETLALVLASTFVCMLVGVPLGIAAARRPWLYAIMRPILDLMQTIPTFVYLVPAMIL 154

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + + PG +       +FAI  S    MT      + + P  L E + +F  +  Q   
Sbjct: 155 LGLGMVPGLIA----TVVFAIPAS--IRMT---RLGIISTPPSLVEAAEAFGATPRQVLR 205

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + VPF+MP    GL   +M+S+S
Sbjct: 206 KVEVPFAMPQIMAGLTQTIMLSLS 229


>gi|104780260|ref|YP_606758.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas entomophila L48]
 gi|95109247|emb|CAK13944.1| putative glycine betaine/carnitine/choline ABC transporter,
           permease protein [Pseudomonas entomophila L48]
          Length = 237

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168

Query: 198 MSMS 201
           ++++
Sbjct: 169 VALA 172


>gi|91226673|ref|ZP_01261362.1| ABC transporter permease protein [Vibrio alginolyticus 12G01]
 gi|91188970|gb|EAS75253.1| ABC transporter permease protein [Vibrio alginolyticus 12G01]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W +K
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266


>gi|121999135|ref|YP_001003922.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
 gi|121590540|gb|ABM63120.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
          Length = 274

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 11/163 (6%)

Query: 379 VIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           ++WL    ++ R+ + + +A+ I + VGI  G  P+      PF   +A  P     P++
Sbjct: 71  LLWLDTGASLGRLGMGVALAAAIGLLVGILNGCLPYARRTFSPFVTAVAMIPPLAVLPIL 130

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L       +L++FG   +I+ ++       P +    A +   + W+    +
Sbjct: 131 FIAFGVGELAK----VMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIVLRV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           ILP   P  +     + G AW   I SE  +       T GLG
Sbjct: 187 ILPQTLPRLIDATRLSLGAAWLFLIASEAIA------ATEGLG 223



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ELA +  I       +   + Q +  +PR+    +++   S WQ    + +P ++P L+
Sbjct: 137 GELAKVMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIVLRVILPQTLPRLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGV 251
               +S+   W F++ASE I   +      G+G  I L  +  D+  IL   A +T+L  
Sbjct: 197 DATRLSLGAAWLFLIASEAIAATE------GLGYRIFLVRRYLDMETILPYVAWITLLA- 249

Query: 252 IFLYD 256
            FL+D
Sbjct: 250 -FLFD 253


>gi|99078012|ref|YP_611270.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99035150|gb|ABF62008.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 269

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 112 LVPLMAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 162

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+     
Sbjct: 163 DNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAQY- 221

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252
                GIG+YI  A    DL  +     +L++LGV+
Sbjct: 222 -----GIGAYILEAGSLYDLERLFAGVVILSLLGVL 252


>gi|209550237|ref|YP_002282154.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535993|gb|ACI55928.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 301

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ A + A+       M   ++ +L  I R L E +R    SGWQ  W + +P + PG  
Sbjct: 170 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 227

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+ G  FVV   M       +   G  + +AL +K Q
Sbjct: 228 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 264


>gi|126650095|ref|ZP_01722328.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus sp.
           B14905]
 gi|169827315|ref|YP_001697473.1| glycine betaine transport system permease [Lysinibacillus
           sphaericus C3-41]
 gi|126593267|gb|EAZ87229.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus sp.
           B14905]
 gi|168991803|gb|ACA39343.1| Glycine betaine transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 284

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           +KS     ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 122 SKSTIAESIIKPILDFMQTMPGFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRMTN 178

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +P++L E + S+  +  QK + + +P +    M G+   +M+S+S    
Sbjct: 179 L------GIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLSLS---- 228

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++   +
Sbjct: 229 ------MVVIA-SMIGAPGLGREVLTALQRTQV 254


>gi|118467527|ref|YP_886801.1| transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118168814|gb|ABK69710.1| transporter permease 2, putative [Mycobacterium smegmatis str. MC2
           155]
          Length = 262

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +L NV  G    P  + ++A S     W+   +II+P I    +TG   A   A    ++
Sbjct: 151 VLINVSTGVQEIPRVYWKLARSVRAGRWQTLTHIIIPAIRRPLLTGIRLAVSLAVVGVVL 210

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           SE  +         GLG  + +S   G +P +V  ++++      ++  LW 
Sbjct: 211 SEFFATRR------GLGRVVLQSYSHGDYPSMVATIMLLITISFGISIVLWQ 256


>gi|52079549|ref|YP_078340.1| sugar transporter AmyD [Bacillus licheniformis ATCC 14580]
 gi|52784913|ref|YP_090742.1| AmyD [Bacillus licheniformis ATCC 14580]
 gi|52002760|gb|AAU22702.1| sugar transporter AmyD [Bacillus licheniformis ATCC 14580]
 gi|52347415|gb|AAU40049.1| AmyD [Bacillus licheniformis ATCC 14580]
          Length = 307

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 30/47 (63%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            L ++P+D  E ++    SG+Q+FW + +P  MP +  NM++++ GG
Sbjct: 193 GLGSVPKDFYEAAQIDGASGFQQFWKITLPLLMPSVTINMVINIIGG 239


>gi|255526484|ref|ZP_05393394.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185853|ref|ZP_06854259.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255509803|gb|EET86133.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049521|gb|EFG88949.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 263

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL------SLLM 456
           P+ I +G +  +   I+PF + +   P     P+++           LW        L +
Sbjct: 74  PMAIILGMKKELLPYIEPFLEFMRHVPPIAVIPMLI-----------LWFGIGETSKLAV 122

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           IF   ++ +F N + G + +     EV   F  +    +  IILP   P  +TG     G
Sbjct: 123 IFLATFFPIFSNTLNGVTNYDEKLLEVGEIFGFSTTDKFFKIILPQAVPSIITGIQLGLG 182

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +W + + +E+ +       ++G+G Y+    E+ S P+++L
Sbjct: 183 YSWRSLMGAELIA------ASSGIG-YMIMDAEQLSRPDIIL 217


>gi|163856716|ref|YP_001631014.1| putative transport system permease protein [Bordetella petrii DSM
           12804]
 gi|163260444|emb|CAP42746.1| putative transport system permease protein [Bordetella petrii]
          Length = 262

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+    ++ +     LSLL + G  + +  N   G  +      E+
Sbjct: 105 QMVRNIPVLALIPLVIL---WFGIEEAAKLSLLAL-GVFFPVYLNTFHGIRSVDPALIEM 160

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             S+ ++GWR +R +ILPG  P  + G   A G  W   IV+E  S
Sbjct: 161 GRSYGLSGWRLYRDVILPGALPSMLVGLRFALGLVWVILIVTETIS 206


>gi|118500401|gb|ABK97399.1| MsmF [uncultured bacterium Sargasso-2222818]
          Length = 285

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 10/177 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++   IA+ I +P+G+++G+         P  + L   P   + PL +   S     P
Sbjct: 91  RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMFSGLE-TP 149

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            ++L+ L    + +    N + G ++    +   A     +    + ++++PG  P+  T
Sbjct: 150 VIFLATL---ASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHVVVPGALPFIFT 206

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G   + G AW + + +E+ S         GLG  I +S    ++  +V+ +L +  F
Sbjct: 207 GLEISVGVAWFSLVAAEMVS------GEFGLGYMINDSYMNITYVSMVIAMLTLGFF 257



 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 17/192 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           + H    Y+ R   R+L A  I+             S++      PIL+ ++ IPIL ++
Sbjct: 80  EYHDHIYYSCR---RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWV 136

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L    +  A LA++F          T +    + +I       ++    S 
Sbjct: 137 PLAILMFSGLETPVIFLATLASLFVT--------TLNTLLGVNSIDESYFRAAKCLGASN 188

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
              F ++ VP ++P +   + +S+   WF +VA+EM V G+      G+G  I  +    
Sbjct: 189 TDVFLHVVVPGALPFIFTGLEISVGVAWFSLVAAEM-VSGEF-----GLGYMINDSYMNI 242

Query: 237 DLLAILYAMLTM 248
             ++++ AMLT+
Sbjct: 243 TYVSMVIAMLTL 254


>gi|148546145|ref|YP_001266247.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148510203|gb|ABQ77063.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313497240|gb|ADR58606.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 237

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168

Query: 198 MSMS 201
           ++++
Sbjct: 169 VALA 172


>gi|307247268|ref|ZP_07529317.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307256309|ref|ZP_07538092.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306856241|gb|EFM88395.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306865135|gb|EFM97035.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
          Length = 288

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    S +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGASAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|255263921|ref|ZP_05343263.1| glycine betaine transporter, permease protein [Thalassiobium sp.
           R2A62]
 gi|255106256|gb|EET48930.1| glycine betaine transporter, permease protein [Thalassiobium sp.
           R2A62]
          Length = 343

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +KS RL   +VPILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 175 SKSDRLQRSVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 233

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      + +D+ E + +F ++  QK   + +P ++P    G+   +MMS++     
Sbjct: 234 GIRL------VDQDVIEAANAFGMNSNQKLLKVELPLALPNIMAGVNQTIMMSLA----- 282

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 283 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 308


>gi|261402938|ref|YP_003247162.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus vulcanius M7]
 gi|261369931|gb|ACX72680.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus vulcanius M7]
          Length = 258

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+    +AS + IP+GI +G    +++      +LL   P   + PL    ++++
Sbjct: 64  ISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELLRPIPPLAWVPL---SLAWF 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + +  ++  G  + IL N I+G  + P    E A +    G      +++P   P
Sbjct: 121 GLG-EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAKGRDILLKVVIPASSP 179

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 180 SILTGLRVGAGIAWMCVVAAEM 201


>gi|124485204|ref|YP_001029820.1| hypothetical protein Mlab_0377 [Methanocorpusculum labreanum Z]
 gi|124362745|gb|ABN06553.1| binding-protein-dependent transport systems inner membrane
           component [Methanocorpusculum labreanum Z]
          Length = 253

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 4/141 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++RV +  IIA +I +P+GI +G  P +        Q+L   P   + PL ++     
Sbjct: 59  VSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPLSLAWFG-L 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L P L    +++ G  + IL N I G       + E A  +     +    +I+P   P
Sbjct: 118 GLTPIL---FIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQIITKVIIPAAGP 174

Query: 505 YYVTGAITACGGAWNASIVSE 525
               G     G AW + + +E
Sbjct: 175 AIWNGLRVGFGIAWMSVVAAE 195


>gi|157369046|ref|YP_001477035.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157320810|gb|ABV39907.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 281

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 16/129 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LAA+S R+  V++P++D+MQ++P   +L   ++ F     GKV       I+A  T  + 
Sbjct: 116 LAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLF---GLGKVPAILATVIYA--TPPLI 170

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T      +  + +++ E   +F  + WQK + + +P ++P    G+    MMS+S   
Sbjct: 171 RLT---DLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLS--- 224

Query: 205 FFVVASEMI 213
             VV + MI
Sbjct: 225 -MVVVASMI 232


>gi|154247387|ref|YP_001418345.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161472|gb|ABS68688.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 283

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 8/127 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V    A  SR++     P  D ++ IP + +L   V++     P KV+    +  F +F 
Sbjct: 107 VLGIAAGLSRKVEQFFGPTFDTIRHIPGIAWLPLIVLWLGIGAPAKVLVIAKSVFFPVF- 165

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                   +  Q + N+ ++  E+++   L+ WQ    + +P +MP ++ ++  +    W
Sbjct: 166 -------LNTLQGIRNVEKNYIELAKVLTLTRWQLVRKVILPAAMPSIMVSLRYAAGLAW 218

Query: 205 FFVVASE 211
             VV +E
Sbjct: 219 ALVVVAE 225


>gi|333001263|gb|EGK20831.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri VA-6]
          Length = 223

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 53  LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 112

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 113 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 148


>gi|328469976|gb|EGF40887.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio parahaemolyticus 10329]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L  +     F  D+LL +  I W NK
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266


>gi|320161980|ref|YP_004175205.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319995834|dbj|BAJ64605.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 295

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +WN+   M     NIP++L+E +R    + WQ  W++ +P S+P L    + S+ G W
Sbjct: 156 IWNVIILM-NFFRNIPKELDEAARIDGANPWQLLWHIYLPTSLPALATITLFSIVGHW 212


>gi|254503977|ref|ZP_05116128.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440048|gb|EEE46727.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 512

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   + IQP    +   PA VF   ++  ++++       +   MIFG
Sbjct: 345 IGIPLGMFAARRPRFYAVIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIFG 401

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +   V+ G    P   +E A +F    W     + LP   P    G
Sbjct: 402 GTPVVRLTVL-GLRGVPESVREAAIAFGANKWYLLTKVDLPLASPSIRAG 450


>gi|50914290|ref|YP_060262.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|50903364|gb|AAT87079.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10394]
          Length = 311

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +L P ++++  IP  + GF+   V+  FM    G      L+ +  +F   +  +TF   
Sbjct: 124 LLQPAVELLIGIPSVVYGFIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMILPTVTFMTT 183

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V 
Sbjct: 184 DSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVG 243

Query: 216 GDTVIP 221
              V+P
Sbjct: 244 NSAVMP 249


>gi|56962376|ref|YP_174101.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56908613|dbj|BAD63140.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 255

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 21/152 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + ++++IP L  +   +++F     GK+    L  +F I+         + +  + ++ +
Sbjct: 98  IQMLRNIPHLALIPLIILWFGIGEEGKIFLIALGVMFPIY--------LNTFHGIRSVDK 149

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D  E+  ++ LS    FW++ +P ++P ++  +  ++   W  ++ +E I   D      
Sbjct: 150 DYIEMGNNYGLSNMAAFWHIILPGALPSILVGLRYALGIMWVTLIVAETIAAKD------ 203

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTML 249
           GIG ++A+  +E    D++    ILYA+L  L
Sbjct: 204 GIG-FLAMDAREFMQMDVVVLSIILYALLGKL 234


>gi|254227574|ref|ZP_04921006.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262396163|ref|YP_003288016.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sp. Ex25]
 gi|151940186|gb|EDN59012.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339757|gb|ACY53551.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sp. Ex25]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L  +     F  D+LL +  I W NK
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266


>gi|332093256|gb|EGI98316.1| inner membrane ABC transporter permease protein yehY domain protein
           [Shigella boydii 5216-82]
          Length = 223

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 53  LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 112

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 113 VVGLNQIPRDVLESTRAMGMSGAQRFLHVQLPLALP 148


>gi|325300707|ref|YP_004260624.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           salanitronis DSM 18170]
 gi|324320260|gb|ADY38151.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           salanitronis DSM 18170]
          Length = 397

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 18/194 (9%)

Query: 92  KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147
           K+R+    L PI++++  IP  + GF    V+  +    +   V  + LA    +    +
Sbjct: 207 KTRKF---LKPIIELLNGIPSVVYGFFGLAVIVPFLQQTFNLPVGESGLAGSLVLAIMAL 263

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +      ++ + PR + E S +   + WQ  + + +PFS+ G+   +++ + G     
Sbjct: 264 PTIITVGEDAMRSCPRSMREASLALGATQWQTIYKVVIPFSISGITSGIVLGI-GRAIGE 322

Query: 208 VASEMIVVGDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             + ++V G+  +       PL  I + IA  + E       Y  L +LGVI  +  L+ 
Sbjct: 323 TMAVLMVTGNAAVMPHSILEPLRTIPATIAAELGEAPAGGAHYQSLFLLGVILFFITLII 382

Query: 261 R---PMIVWSNKFR 271
                ++   NKF+
Sbjct: 383 NSCVEIVSSRNKFK 396


>gi|315181864|gb|ADT88777.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Vibrio furnissii NCTC 11218]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+P+L   Q+IP+       +++       KV+   +AAI   F      +T   Y  L 
Sbjct: 108 LLPLLIASQAIPVFAIAPVLMLWLGYGITSKVV---MAAIIIFFP-----VTTCCYDGLR 159

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+ V
Sbjct: 160 NTPIGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWV 213

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + ++  ++A L +L V+     F+ D+LL +  I W NK
Sbjct: 214 GSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIVLYFITDKLL-KTAIPWENK 266


>gi|296103049|ref|YP_003613195.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057508|gb|ADF62246.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 263

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 23/173 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGFALFINVLLPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           GIG Y+A+  +E    D++    ILYA+L  L  +    Q L R  + W+  +
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAY 256


>gi|312111380|ref|YP_003989696.1| taurine ABC transporter inner membrane protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216481|gb|ADP75085.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 264

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+ + +I+A    +P+GI+ G   +I +   P  +     P   ++ L+V       
Sbjct: 72  SLYRLFLALILAVFTAVPLGIFCGISKYILAIFDPIIEFYRPLPPLAYYALLV------- 124

Query: 446 LNPNLWLSL------LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       ++F + +  LF + ++     P +    A S   +  +   YII
Sbjct: 125 ----LWLGIDDKSKVALLFLSAFAPLFISTVSSVQRVPQERINGALSLGASKPKVLLYII 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG  TA G  +   + +E+ +       T+G+G  + ++++      V +G
Sbjct: 181 LPSCLPDIITGFRTAIGVTYATLVAAEMVA------ATSGIGWMVLDASKYLRSDIVFVG 234

Query: 559 VLIMCCFVLALN 570
           +++M    + ++
Sbjct: 235 IILMGGIAILMD 246


>gi|297563301|ref|YP_003682275.1| phosphate ABC transporter inner membrane subunit PstA [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296847749|gb|ADH69769.1| phosphate ABC transporter, inner membrane subunit PstA
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 359

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFS 153
           R+  ++V  +D+M  IP +    F V  +M L+ PG+  GA  A   A+    V  +  S
Sbjct: 173 RMKRIIVFFVDVMTGIPSIVAGLFVVALWMILFGPGRTNGAAGAIALAVLMIPV--VVRS 230

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             + L  +P+DL E S +  +  W+    + +P S  GL   +M++++
Sbjct: 231 SEEMLRLVPQDLREASYALGVPKWRTITKVVLPTSAAGLTTGIMLAIA 278


>gi|77409210|ref|ZP_00785920.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77172186|gb|EAO75345.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|319745010|gb|EFV97338.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 305

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 6/174 (3%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSIP 111
           P      +LP  A    + +LSA++ +         +   S + G  +L P ++++  IP
Sbjct: 71  PSAKSFGALPMIAGSFIVTILSAIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVGIP 130

Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
             + GF+   ++  +  +++ G   G  L+ +  +F   +  +TF    SL  +PR  +E
Sbjct: 131 SVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLRAVPRHYKE 189

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    ++P
Sbjct: 190 ASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILP 243


>gi|319646662|ref|ZP_08000891.1| AmyD protein [Bacillus sp. BT1B_CT2]
 gi|317391250|gb|EFV72048.1| AmyD protein [Bacillus sp. BT1B_CT2]
          Length = 308

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 30/47 (63%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            L ++P+D  E ++    SG+Q+FW + +P  MP +  NM++++ GG
Sbjct: 194 GLGSVPKDFYEAAQIDGASGFQQFWKITLPLLMPSVTINMVINIIGG 240


>gi|303246590|ref|ZP_07332868.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302491930|gb|EFL51808.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 278

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 26/140 (18%)

Query: 77  VISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +I +LF+ V AT        LAA     G +++P+LD MQ++P   +L   + +F     
Sbjct: 95  IILVLFSTVIATSIGVPLGILAAMRPGWGRIIMPLLDFMQTMPAFVYLIPAIPFF----- 149

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                  L  + AIF++ ++ M  ++  +   +  +P  L E + +F  +  Q+   + +
Sbjct: 150 ------GLGPVSAIFSTVIFAMPPAIRLTCLGIRQVPESLTEAADAFGATRMQRLRKVEL 203

Query: 186 PFSMP----GLVWNMMMSMS 201
           P ++P    G+   +M+S+S
Sbjct: 204 PLALPTIMAGINQTIMLSLS 223



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   +IA+ I +P+GI    RP     I P    +   PA V+    +  + ++ 
Sbjct: 94  TIILVLFSTVIATSIGVPLGILAAMRPGWGRIIMPLLDFMQTMPAFVYL---IPAIPFFG 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P   +   +IF     I    + G    P    E A +F  T  +  R + LP   P 
Sbjct: 151 LGPVSAIFSTVIFAMPPAIRLTCL-GIRQVPESLTEAADAFGATRMQRLRKVELPLALPT 209

Query: 506 YVTG 509
            + G
Sbjct: 210 IMAG 213


>gi|260776831|ref|ZP_05885725.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606497|gb|EEX32771.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio coralliilyticus ATCC BAA-450]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 21/175 (12%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+IP+       +++       KV+ A +   F + T          Y  L 
Sbjct: 108 LLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAMIIFFPVTTC--------CYDGLR 159

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+ V
Sbjct: 160 NTPTGYLDLAKTMGASKWQMLKHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWV 213

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + ++  ++A L +L ++     F+ D+LL + +I W N+
Sbjct: 214 GSSEGLG-YLMLQANARMIIDEMFAALFILALLSVSLYFITDKLL-KKLIPWENQ 266


>gi|121610976|ref|YP_998783.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555616|gb|ABM59765.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 290

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LSA +ISL F        A+S R+   + P+LD MQ++P   +L    + F     G+V 
Sbjct: 107 LSATLISLFFGIPLGIGCARSNRVNACVRPVLDFMQTMPAFVYLIPAAMLF---GLGRVP 163

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+    V  +T      +  +  +  E   +F  +  Q  + + +P +MP  
Sbjct: 164 GTIATVIFAM--PPVVRLT---SLGIRQVSTEQVEAGNAFGCTSTQLLFKVQLPIAMPTI 218

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 219 MAGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 257


>gi|71279687|ref|YP_268659.1| putative sulfonate ABC transporter permease [Colwellia
           psychrerythraea 34H]
 gi|71145427|gb|AAZ25900.1| putative sulfonate ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 255

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L + +I++L   +   +   + R+  +   +L IM +IP L  +    ++F    
Sbjct: 63  TLRRVLLSFIIAMLLGGIIGIMMGVNARINKLSDSLLIIMLNIPALVTILLCYIWF---- 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V   E AAI A+  +++  +   + +    + +DL  V++ ++LS  + F+ + +P 
Sbjct: 119 -GLV---ESAAIAAVVINKIPTVVVMIREGARAVDKDLLAVAKIYQLSASKTFFNVFLPQ 174

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P ++ +    +S  W  V+  E++   D      G+G  +    +  D+  IL   L 
Sbjct: 175 LYPFIIASARSGLSLIWKIVLVVELLGRSD------GVGFALNTLFQFFDIAGILAYTLV 228

Query: 248 MLGVIFLYDQLLFRP 262
            + +I L + L+F+P
Sbjct: 229 FVVIILLIEALIFKP 243


>gi|89068073|ref|ZP_01155490.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
 gi|89046312|gb|EAR52369.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
          Length = 258

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%)

Query: 39  IQETTVPRDIV---DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +Q+ TVP  +    ++V   +D   L  +A +T  R+ +A  +S+L       L  + R 
Sbjct: 34  LQDPTVPSPVAVVAELVAQVVDGRLLEDFA-KTLARVAAAFAVSMLLGCAIGALLGRVRF 92

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +  P + I  +IP +  +      +M L       +E+A + A+  ++   +  +M 
Sbjct: 93  ADGLFAPWIVIGLNIPAI-VVAIVCYIWMGL-------SEIALVTAVAINKTPLVATTMR 144

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +  +  +  E+++ +R+S W++   + +P  MP L+      +S  W  V+  E  V+
Sbjct: 145 EGVRALSAEYRELAQVYRMSPWRRLRLVELPQLMPYLLTAARTGLSLIWKIVLVFE--VL 202

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           G       G+G  I +     D+ AIL   L  + V+F  +    RP+
Sbjct: 203 GSD----GGVGFRIGIFFGFFDMTAILAYTLAFICVVFAVEYGAMRPL 246



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 29/56 (51%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           G  A   +++E+A  + ++ WR  R + LP + PY +T A T     W   +V EV
Sbjct: 146 GVRALSAEYRELAQVYRMSPWRRLRLVELPQLMPYLLTAARTGLSLIWKIVLVFEV 201


>gi|170723468|ref|YP_001751156.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169761471|gb|ACA74787.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 237

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 38/64 (59%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + 
Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168

Query: 198 MSMS 201
           ++++
Sbjct: 169 VALA 172


>gi|226945116|ref|YP_002800189.1| aliphatic sulfonate ABC transporter permease [Azotobacter
           vinelandii DJ]
 gi|226720043|gb|ACO79214.1| aliphatic sulfonate ABC transporter permease protein [Azotobacter
           vinelandii DJ]
          Length = 264

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDAGLVEMARSYGLSGFSLFRQVILPGALPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +L+             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADVAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 TLERLWLRWHPAY 257



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 64/132 (48%), Gaps = 15/132 (11%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMVRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDA 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 GLVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE 235
           GIG Y+A+  +E
Sbjct: 208 GIG-YLAMNARE 218


>gi|332686417|ref|YP_004456191.1| phosphate transport system permease PstA [Melissococcus plutonius
           ATCC 35311]
 gi|332370426|dbj|BAK21382.1| phosphate transport system permease protein PstC (TC 3.A.1.7.1)
           [Melissococcus plutonius ATCC 35311]
          Length = 305

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP 111
           V +LP       + +LSA     LF   +A  AA        +R   +L P+++++  IP
Sbjct: 79  VGALPMIVGSFIVTLLSA-----LFATPFAIGAAVFMTEISPKRGAKILQPVIELLVGIP 133

Query: 112 --ILGFLTFTVVYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
             + GF+  +VV  +  +++ G   G  LA  F +F   +  +T     +L ++PR   E
Sbjct: 134 SVVYGFIGLSVVVPLVRSVFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKSVPRHYRE 192

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++
Sbjct: 193 ASLALGATRWQTIYKIVLRAAIPGVLTAIIFGMARAFGEALAIQMVI 239


>gi|291003437|ref|ZP_06561410.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 269

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   +IA  I +P+G+ IG+   +S  + P  +L     A    P+ V  +    
Sbjct: 80  SLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGE 139

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L++F   W IL N I+G         + A S     +  +  ++LP + P 
Sbjct: 140 TSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPT 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +    + +E+A          GLG  I  S      P++  G++ +   
Sbjct: 196 VFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLL 249

Query: 566 VLALNRFL 573
            L  N+ L
Sbjct: 250 GLGFNQAL 257


>gi|254504128|ref|ZP_05116279.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440199|gb|EEE46878.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 273

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 19/171 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  +P +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 116 LVPLVAALFPVPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     + A+EM+  G  
Sbjct: 167 DNVDRTLIRMGQSFGLSWLSIVRKIILPGAMPGILSGLRISLAIAIILLTAAEML--GAE 224

Query: 219 VIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFRPMIVW 266
                GIG+Y+  A ++ + D L     +L++LGVI  +    L R ++VW
Sbjct: 225 Y----GIGAYVLQAGSLYDLDRLFAGVVILSLLGVILNMVIGFLERRLLVW 271


>gi|194292746|ref|YP_002008653.1| aliphatic sulphonate ABC transporter, permease protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226650|emb|CAQ72601.1| putative aliphatic sulphonate ABC transporter, permease protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 281

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 24/235 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           QL S+QR    L  F         +  AWQ +         Q    V+ LG  +++RV  
Sbjct: 43  QLASSQRAHLGLVTFANVPAPSDVVPAAWQLL---------QSPKLVLHLGN-SLYRVFA 92

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
               A+   I +G+ IG    +   + P  ++L   P   + PL +       + P+  L
Sbjct: 93  GFGAAAAAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAI------LMFPSSEL 146

Query: 453 SLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           S++ I   G  + IL N I G           A S     W  +  ++LP   P  VTG 
Sbjct: 147 SMIFITFIGALFPILLNTIHGVERTDPRLIATARSLGARRWTVFPEVLLPAALPSIVTGL 206

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
               G +W   + +E+ +  +      G+G Y  E+    ++ ++V+G+L++  F
Sbjct: 207 AIGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAF 255


>gi|146282357|ref|YP_001172510.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145570562|gb|ABP79668.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 292

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 15/212 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQDVLY 378
           IR         L +   +S    ++W     G+A  +   S G ++      +T + +L 
Sbjct: 38  IRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPGAVLERIGRWWTSEGLLG 97

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437
            I    I+++RV+     +++I +P+G++IG +RP + + ++P    +   PA  F PLV
Sbjct: 98  DI---GISVWRVMAGFGASALIALPLGLYIGTYRP-VQAFLEPLTDFIRYMPAVAFIPLV 153

Query: 438 VSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +  V     +      +L+IF GT + ++  V       P    E A +         + 
Sbjct: 154 MLWVGIDEGS-----KVLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRSEIVKL 208

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +ILP   P  +      CG AW   +V+E+ +
Sbjct: 209 VILPSAKPALLDTLRITCGWAWTYLVVAELVA 240


>gi|50123217|ref|YP_052384.1| sulfate ester ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613743|emb|CAG77194.1| sulfate ester ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 543

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/225 (19%), Positives = 101/225 (44%), Gaps = 29/225 (12%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G     +P +++  +PI+L             +R++      +    V  +L   +RRL 
Sbjct: 76  GSARAFIPEELIHQLPISL-------------MRLVIGFSGGIALGLVLGSLFGLNRRLN 122

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            + +P+  ++  IP L ++   ++          IG  L  +  + +  V  +T      
Sbjct: 123 ALFMPLFTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAG 174

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +   P+ L E+ RS RL       YL +P  +P ++  + ++ S GW  ++A E++   +
Sbjct: 175 IQQTPQKLHEMVRSLRLPPVAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE 234

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
                 G+G Y+ +  ++  +L +++  + ++G++ F  +++L +
Sbjct: 235 ------GLG-YLLVQSRQLFMLDLVFVCILIIGILGFTGERVLLK 272



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG    P    E+  S  +    + RY+ILP + PY +TG   A    W A I  E+ + 
Sbjct: 173 AGIQQTPQKLHEMVRSLRLPPVAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 231

Query: 530 GHIHLRTTGLGAYIAESTE 548
                 + GLG  + +S +
Sbjct: 232 -----SSEGLGYLLVQSRQ 245


>gi|28899989|ref|NP_799644.1| ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363283|ref|ZP_05776152.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
 gi|260880570|ref|ZP_05892925.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
 gi|260898477|ref|ZP_05906973.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28808272|dbj|BAC61477.1| ABC transporter permease protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085008|gb|EFO34703.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308091930|gb|EFO41625.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
 gi|308112043|gb|EFO49583.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
          Length = 266

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157
           L+PIL   Q+IP+     F +   + L+ G  I ++  +AAI   F      +T   Y  
Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L N P    +++++   S WQ   ++ +P ++P L   + +++      V+A    VVG+
Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
            V    G+G Y+ L    + ++  ++A L +L  +     F  D+LL +  I W NK
Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266


>gi|284047718|ref|YP_003398057.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
 gi|283951939|gb|ADB46742.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
          Length = 265

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +++  V A       D +E AS  + T W+ +RY+  P I P  V GA+     A+  SI
Sbjct: 145 FVIITVGARLEGCRQDLEEAASDLYATPWQAFRYVTFPMILPGVVAGALM----AFTLSI 200

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
              V S+      +T L  YI    ++G  P++
Sbjct: 201 DDFVISFFVAGPNSTTLPLYIYAMVKRGISPQI 233


>gi|239983080|ref|ZP_04705604.1| transport system integral membrane protein [Streptomyces albus
           J1074]
 gi|291454911|ref|ZP_06594301.1| transport system integral membrane protein [Streptomyces albus
           J1074]
 gi|291357860|gb|EFE84762.1| transport system integral membrane protein [Streptomyces albus
           J1074]
          Length = 305

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 11/214 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + + +    +L  IW    ++ R ++  + A  I  P+G+ +     + + I P    
Sbjct: 88  GEVTDAWYQGTLLGYIW---TSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSG 144

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P     V +  LN  +  +++++ G    I   +++G    P  +     
Sbjct: 145 LQSLPSVAWVP---PAVIWLGLNDQMMFAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 200

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543
           +   TG R   +I++P   P Y+ G       +W + + +E +AS   + +   GLG  +
Sbjct: 201 TLGATGLRGTWHIVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELGI---GLGQLL 257

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                  S   V L +L++    +A++  ++ PL
Sbjct: 258 ENGRVASSMSMVFLAILLILVVGVAIDLLIFSPL 291


>gi|260459618|ref|ZP_05807872.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034420|gb|EEW35677.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 281

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PFA +L   P    FPL+    + Y  N    L L       + IL N   G ++   + 
Sbjct: 114 PFAIVLQVTPIVAIFPLI----NIYVDNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNL 169

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++      T W+  RY+ LP   PY++ G   A G +   ++V+E  +      +++GL
Sbjct: 170 RDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVA--GTTGQSSGL 227

Query: 540 GAYIAESTEKGSFPEV 555
            + I E+  + + P +
Sbjct: 228 ASRIIEAGYRLNAPRL 243


>gi|218886146|ref|YP_002435467.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218757100|gb|ACL07999.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 280

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 18/119 (15%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA S R   V++P+LD+MQ++P   +L   + +F            L  + A+F + ++ 
Sbjct: 117 AAMSDRARAVVMPVLDVMQTMPAFVYLIPAIPFF-----------GLGKVAAVFATVIFA 165

Query: 150 MTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
           M  ++      +  +P +L E + +F    +Q+   L +P + P    G+   +M+++S
Sbjct: 166 MPPAIRFTCLGIRQVPAELVECAEAFGTGRFQRLVKLELPLAAPTMLAGVNQTVMLALS 224


>gi|209516867|ref|ZP_03265717.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502683|gb|EEA02689.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 292

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++     FV  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  + Y    ++P  L+   R++ L+G +    + VP ++P
Sbjct: 157 LL-------FVLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232


>gi|116253110|ref|YP_768948.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257758|emb|CAK08856.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 304

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ A + A+       M   ++ +L  I R L E +R    SGWQ  W + +P + PG  
Sbjct: 173 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 230

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+ G  FVV   M       +   G  + +AL +K Q
Sbjct: 231 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 267


>gi|319901743|ref|YP_004161471.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Bacteroides helcogenes P 36-108]
 gi|319416774|gb|ADV43885.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Bacteroides helcogenes P 36-108]
          Length = 394

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 12/197 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGM--VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128
           A++++L F    A   ++    G+  ++ P+++++  IP  + GF    V+  +    + 
Sbjct: 185 AILMALPFGLAVAIYMSEVANSGIRNLMKPVIELLSGIPSVVYGFFGLIVIVPFIQKTFD 244

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V  + LA    +    +  +      +L N PR + E S +   S WQ  + + +P+S
Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDALRNCPRAMREASLALGASQWQTIYKVVIPYS 304

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242
           + G+   +++ +       +A  M+     VI      PL  I + IA  + E       
Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGSH 364

Query: 243 YAMLTMLGVIFLYDQLL 259
           Y  L +LGV+  +  LL
Sbjct: 365 YEALFLLGVVLFFISLL 381


>gi|146343621|ref|YP_001208669.1| permease [Bradyrhizobium sp. ORS278]
 gi|146196427|emb|CAL80454.1| Putative permease of the binding-protein-dependent transport system
           family [Bradyrhizobium sp. ORS278]
          Length = 247

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 15/165 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++  +++P +  +   +VYF           ELA +  +F +  ++    MY+ +  I
Sbjct: 88  PLINFFRALPPIALIPLVIVYFGV--------DELAKLVILFYAAFFSGVIVMYEGVSQI 139

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                 V+++   +  + F  + +P ++P ++  + +++   W  +VASE+I        
Sbjct: 140 TPLYIRVAQTLGATELETFLKVIIPLTVPHILTALRVALGVTWATLVASELIAAQR---- 195

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             G+G+ I  A     LL ++Y  +  +G + L    L R +  W
Sbjct: 196 --GLGATIQNA-STYFLLDVIYVGIICIGAVALIMDTLLRRLSAW 237


>gi|107025580|ref|YP_623091.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116693237|ref|YP_838770.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105894954|gb|ABF78118.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116651237|gb|ABK11877.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 255

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|329940251|ref|ZP_08289533.1| transport system integral membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329301077|gb|EGG44973.1| transport system integral membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 307

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 18/205 (8%)

Query: 73  LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +S  ++  LF     T    L A+ + +   + PIL  +QS+P + ++   V++      
Sbjct: 109 VSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW------ 162

Query: 129 GKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +G + + ++A I    V ++   +   +  +P       R+   +G +  W++ +P 
Sbjct: 163 ---LGLDNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGTWHIVLPA 219

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           ++PG V  +    +  W  ++A+E+I    D  +   G+G  +       D+  +  A+L
Sbjct: 220 ALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMSMVFEAIL 276

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271
            +L V    D L+F P+  W  + R
Sbjct: 277 LILVVGIAIDLLIFSPLERWVLRSR 301



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 11/204 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+L  IW    ++ R ++  + A  I  P+G+ +     + + I P    L + P+  + 
Sbjct: 100 DLLGYIW---TSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWV 156

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P     V +  L+ N  +  +++ G    I   +++G    P  F     +   TG +  
Sbjct: 157 P---PAVIWLGLD-NSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGT 212

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFP 553
            +I+LP   P YV G       +W + + +E +AS+  + +   GLG  +          
Sbjct: 213 WHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMS 269

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
            V   +L++    +A++  ++ PL
Sbjct: 270 MVFEAILLILVVGIAIDLLIFSPL 293


>gi|325108444|ref|YP_004269512.1| binding-protein-dependent transporters inner membrane component
           [Planctomyces brasiliensis DSM 5305]
 gi|324968712|gb|ADY59490.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces brasiliensis DSM 5305]
          Length = 258

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 22/155 (14%)

Query: 436 LVVSCVSY---YHLNPNLWLSLLMI----FGTQWYI-------LFNVIAGAS----AFPN 477
           L +SC  Y    H  P + +S L+I    +G+Q  I       LF VI GA+    +   
Sbjct: 91  LRISCYPYAIFLHTVPIVAISPLIITWFGYGSQSVIVITFIVSLFPVITGATNGLLSAST 150

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           + KE+ + +H + W+    +  P   P  VTGA TA G A   +IV E   +        
Sbjct: 151 ELKELFALYHASRWQTLLKLKFPAAVPQLVTGAQTASGMAVVGAIVGEF--FAGYDSGAY 208

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG YI  +  +G F   VL   ++   +L +  F
Sbjct: 209 GLGYYIFAA--QGQFRTDVLLAAVLLSTLLGIALF 241


>gi|298292916|ref|YP_003694855.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296929427|gb|ADH90236.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 201

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P ++  + IP L +L   +++F        IG EL+ +  IF S    +       +
Sbjct: 41  LLDPPIEFYRPIPPLAYLPLMIIWFG-------IG-ELSKVLLIFLSVFAPVALGARAGV 92

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +   +    + SF  S W+   ++ +P S+P ++  M + +  GW  +VA+EMI   + 
Sbjct: 93  KSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWTTLVAAEMIAATE- 151

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
                G+G  +  A +      ++  ++ +  +  L+D   +L+ R ++ W  K 
Sbjct: 152 -----GLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLMRLIERRIVPWKGKM 201



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 10/165 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+G+ +G  P I   + P  +     P   + PL++       L+  L L  L +F 
Sbjct: 24  VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIGELSKVL-LIFLSVFA 82

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +     AG  +   +    A SF  + W+   ++ILP   P  +T      G  W 
Sbjct: 83  P---VALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWT 139

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + +E+ +       T GLG  +  +++      V++G++++  
Sbjct: 140 TLVAAEMIA------ATEGLGYMVLSASQFLQTSTVIMGIVVIAA 178


>gi|197118115|ref|YP_002138542.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197087475|gb|ACH38746.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 295

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 9/122 (7%)

Query: 93  SRRLGMVLVPILD-IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           S R G  L+ IL      +P +  L  ++++F           + + +F +  + +W M 
Sbjct: 122 STRFGNDLMEILTATFNPLPPIALLPVSLIWFGL--------GQASIVFVLVHAVLWPMA 173

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +     I   +  V R++ L+GW+  W +  P + P L+  + +  + GW  ++A+E
Sbjct: 174 LNAHTGFTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAE 233

Query: 212 MI 213
           ++
Sbjct: 234 LV 235


>gi|152997518|ref|YP_001342353.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150838442|gb|ABR72418.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 281

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T + ++SA  IS+L        AA    L   L PILD+MQ+IP   +L  T++ F + 
Sbjct: 95  QTLVLVVSATAISVLIGVPIGIAAAHRPWLYTTLRPILDLMQTIPTFVYLIPTLILFGLG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG +       IFAI  +    +T   Y  +  +P +L E   +F  +  +  + + +
Sbjct: 155 YVPGLI----STIIFAI--AAPIRLT---YLGVSKVPNELIEAGLAFGCTKSKLLYKVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P +MP    G+   +M+S+S
Sbjct: 206 PAAMPNIMAGVTQCIMLSLS 225



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 32/182 (17%)

Query: 349 FCVVCGVAIGIAW---QSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIAS----II 400
           F V+  + +G+ W   +SIG ++  F    +L +I +G  I   + +VL++ A+    +I
Sbjct: 54  FAVITIILVGV-WFLHRSIGLLI--FITLSLLLIINMGYWIETIQTLVLVVSATAISVLI 110

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-SLLMIFG 459
            +P+GI    RP + + ++P   L+   P            ++ +L P L L  L  + G
Sbjct: 111 GVPIGIAAAHRPWLYTTLRPILDLMQTIP------------TFVYLIPTLILFGLGYVPG 158

Query: 460 TQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
               I+F + A       G S  PN+  E   +F  T  +    + LP   P  + G +T
Sbjct: 159 LISTIIFAIAAPIRLTYLGVSKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAG-VT 217

Query: 513 AC 514
            C
Sbjct: 218 QC 219


>gi|110680132|ref|YP_683139.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109456248|gb|ABG32453.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 344

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S  L  ++VPILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 176 SRSNTLQRMIVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      +  D+ E + +F ++  QK W + +P ++P    G+   +MMS++     
Sbjct: 235 GIRL------VDPDVIEAADAFGMTKRQKLWGVQLPLALPNIMAGVNQTIMMSLA----- 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309


>gi|299143677|ref|ZP_07036757.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518162|gb|EFI41901.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 261

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N+I G  +   ++ ++A  F ++  R   YI L  + P+ ++G   A G AW + + +EV
Sbjct: 151 NLIEGLISIDENYLDMAKIFDVSFNRKLNYIYLSHLKPFIISGLSLAFGMAWKSGLAAEV 210

Query: 527 ASWGH-----------IHLRTTGLGAY 542
            S  +           I+L T  L AY
Sbjct: 211 ISLPNFGIGTLIYNCKIYLDTVNLFAY 237


>gi|229590252|ref|YP_002872371.1| putative integral membrane transport protein [Pseudomonas
           fluorescens SBW25]
 gi|229362118|emb|CAY49020.1| putative integral membrane transport protein [Pseudomonas
           fluorescens SBW25]
          Length = 274

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ S +  R+L    I      V+A     SR     L P    ++SIP L ++   +++
Sbjct: 73  KHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  K++   + A F ++ + V         ++ +I R L EV + +  +  +    
Sbjct: 133 LGIDETSKIVLIAIGAFFPVYLNGV--------AAIRDIDRKLVEVGQMYGFNRRRLVRR 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P ++PGL   +   +S  W F+VA+E+I  
Sbjct: 185 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIAA 217


>gi|227327597|ref|ZP_03831621.1| sulfate ester ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 531

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/219 (19%), Positives = 101/219 (46%), Gaps = 29/219 (13%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
           +P +++  +PI+L             +R++      +    V  +L   +RRL  + +P+
Sbjct: 70  IPEELIHQLPISL-------------IRLVIGFSGGIALGLVLGSLFGLNRRLNALFMPL 116

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
             ++  IP L ++   ++          IG  L  +  + +  V  +T      +   P+
Sbjct: 117 FTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQ 168

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS RL       YL +P  +P ++  + ++ S GW  ++A E++   +      
Sbjct: 169 KLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLASSE------ 222

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261
           G+G Y+ +  ++  +L +++  + ++G++ F  +++L +
Sbjct: 223 GLG-YLLVQSRQLFMLDLVFVCILIIGILGFAGERVLLK 260



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG    P    E+A S  +    + RY+ILP + PY +TG   A    W A I  E+ + 
Sbjct: 161 AGIQQTPQKLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLA- 219

Query: 530 GHIHLRTTGLGAYIAESTE 548
                 + GLG  + +S +
Sbjct: 220 -----SSEGLGYLLVQSRQ 233


>gi|225181817|ref|ZP_03735254.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167490|gb|EEG76304.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 245

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +Y     + +++AMV+++L       +    K RR+G V+   ++I Q++P L  L    
Sbjct: 50  RYLREHVVLVIAAMVLAVLVGIPVGIMLTRPKLRRIGKVIETFVNIGQTVPSLAILALFF 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           VY    +          A+FA++   +  +  + Y  + +I  ++ E +R   ++ W+  
Sbjct: 110 VYLGLGFN--------TALFALWLYSILPILRNTYAGITSIEPEILEAARGMGMTPWRTL 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIK-E 235
           + + +P ++P L       M+G    V  S +I VG     T I    +G  I   I+  
Sbjct: 162 YKIELPLALPVL-------MAG----VRTSTVICVGTATLATFIGGGALGDLIKTGIQVR 210

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +D+L    A L+ L  I L D L  +  I   NK
Sbjct: 211 RDILVFTGAGLSALLAILL-DYLAGQAEIAILNK 243


>gi|224535457|ref|ZP_03675996.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522923|gb|EEF92028.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 394

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 20/176 (11%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-------VYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +L PI++++  IP  + GF    V       V+ + +    + G+ + AI A+ T  +  
Sbjct: 211 LLKPIIELLSGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPT--IIT 268

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A
Sbjct: 269 VT---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSVSGITSGVVLGIGRAIGETMA 325

Query: 210 SEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             M+     VI      PL  I + IA  + E       Y  L +LGV+  +  LL
Sbjct: 326 VLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGAHYEALFLLGVVLFFISLL 381


>gi|170748909|ref|YP_001755169.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170655431|gb|ACB24486.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 283

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 16/146 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A V++LL         A SR    V  P+LD+MQ++P       + VY +   P   +GA
Sbjct: 101 ATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLP-------SFVYLIPALPFFGLGA 153

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP---- 190
            ++A FA     V  +       + N+P +L E S +F  S  QK   + +P ++P    
Sbjct: 154 -VSACFATIIFSVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKLLKVQLPLALPTIMA 212

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
           G+   MM+++S     VV + MI  G
Sbjct: 213 GVNQTMMLALS----MVVIAAMIGAG 234


>gi|126730168|ref|ZP_01745980.1| ABC transporter permease protein [Sagittula stellata E-37]
 gi|126709548|gb|EBA08602.1| ABC transporter permease protein [Sagittula stellata E-37]
          Length = 270

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S+  +L  +P  LEE S S   +GWQ F  + +P  MPGL      +M G + F+ + ++
Sbjct: 158 SIAAALRQVPSSLEEASASLGATGWQTFRLVILPLVMPGL------AMGGIFAFINSFDL 211

Query: 213 IVVGDTVIPLPG 224
             +   + PL G
Sbjct: 212 YTISLLLKPLGG 223


>gi|192291272|ref|YP_001991877.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285021|gb|ACF01402.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 280

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   L P +  +++IP + ++   +++       KV    +   F ++         
Sbjct: 110 ARRL---LDPTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 158

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +  ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA+E
Sbjct: 159 GVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAE 217


>gi|91780224|ref|YP_555431.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692884|gb|ABE36081.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 292

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++     FV  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  + Y    ++P  L    R++ L+G +    + VP ++P
Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232


>gi|307729437|ref|YP_003906661.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583972|gb|ADN57370.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 285

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 8/161 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L +    +  R  S   I  +           SR    ++ P  D  + I +  ++   
Sbjct: 79  ALAKALGASLAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLI 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            V+F      KV+   LAA+  +               +  +PR   E +R FR + WQ 
Sbjct: 139 SVWFGLGDAAKVVFLSLAALLPVAAHTC--------DGIHAVPRSYVEAARVFRYTRWQL 190

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
            W++ +P ++P +   + +++   W   + +E ++V  + I
Sbjct: 191 VWHVILPAALPSIFTGLYLALIYSWLATLGAEYLLVAGSGI 231


>gi|317407312|gb|EFV87284.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 241

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 14/167 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRRL   ++P  + +  IP+L +L F ++      P K I    AA+  +        T 
Sbjct: 69  SRRLEAYVLPTFNALVQIPVLAWLPFVLLIVGIGEPLKYILIAKAALVPV--------TL 120

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q        L EV+R +  S  Q+   + VP ++P L   + +  +  W  +V  E+
Sbjct: 121 NTLQGFRQASPALREVARVYGYSRRQEVLEVVVPLALPTLFTGLRLGFTKAWLSLVVVEL 180

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   +      G+G  I    +   L  ++ A++ +  + +  D+LL
Sbjct: 181 VASSE------GLGYLIVYGRQLFQLDLVMAAVIVVGAIGYAIDRLL 221


>gi|332978589|gb|EGK15295.1| glycine/betaine ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Psychrobacter sp. 1501(2011)]
          Length = 662

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 19/193 (9%)

Query: 70  LRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           ++ ++ +++S+L T V       L A S  L  V+ P+LD+MQ++P   +L   ++ F  
Sbjct: 456 VQTMALLIVSVLVTMVIGIPIGILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFG- 514

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG ++ A+FA        +       +  +P ++ E  RSF  +  Q  +++ +
Sbjct: 515 ------IG-KVPALFATVIYASPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKL 567

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +       M+G    V+ S  +VV  ++I  PG+G  +  +I+  ++   L A 
Sbjct: 568 PQALPNI-------MAGVNQAVMMSLSMVVLASMIGAPGLGEDVLQSIQTLNIGQGLQAG 620

Query: 246 LTMLGVIFLYDQL 258
             ++ +  + D++
Sbjct: 621 TAIVIMAIIIDRI 633


>gi|312197288|ref|YP_004017349.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311228624|gb|ADP81479.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 319

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 24/239 (10%)

Query: 38  GIQETTVPRDIVDIVPITLDV-------HSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           G +   +P  I+D  P  +D        H L    S +  R    + + L    V+    
Sbjct: 88  GSETGLIPARILDSPPTVVDALGHLISTHQLQDALSISLRRAGVGLALGLAVGLVFGLTT 147

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             SR    +L   + +++ IP L      VV+F      K +    A  F I+       
Sbjct: 148 GLSRLGEELLDATMQMVRMIPFLAITPLVVVWFGIGETAKTVLIAFACTFPIY------- 200

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y ++  I   L E +R F + G+     + +P +MPG++  +  SM      ++A+
Sbjct: 201 -LNTYAAVRAIDPKLIEAARVFGVRGFALTRRIIIPNAMPGILVGLRYSMGVSILALIAA 259

Query: 211 EMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLG-VIFLYDQLLFRPMIVW 266
           E I          G+G  +  A      D++  L  + T+LG +I L+ ++L R ++ W
Sbjct: 260 EQINADS------GLGYLVGNAQDAFRNDIILALLLVYTVLGLLIDLFVRILERVLLPW 312


>gi|218885624|ref|YP_002434945.1| ABC transporter inner membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756578|gb|ACL07477.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 265

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI +I++ IP + ++  T+ +F    PGK        IF I+   +     + Y  +   
Sbjct: 109 PIFEIIRPIPPVAWIPLTIFWFGIGLPGK--------IFIIWLGGLVPCVINAYVGVKMT 160

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              L +++R++  S WQ F  L +P ++P +   + ++++  W  +VA+E++
Sbjct: 161 NPTLIQMARTYGASDWQIFKQLCIPSALPMVFGALQIALACCWTNLVAAELL 212


>gi|297182135|gb|ADI18307.1| ABC-type sugar transport system, permease component [uncultured
           Rhodobacterales bacterium HF4000_03E16]
          Length = 389

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 37/69 (53%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P++LEE +R   +S WQ FWY+ +P + P +V  ++M +   W   +   +I + +  
Sbjct: 276 QLPKELEEAARVEGVSQWQIFWYVMLPLAKPMVVTVLIMQVLNAWNDFLLPLVITLANPA 335

Query: 220 IPLPGIGSY 228
           I    +G Y
Sbjct: 336 IRTLSVGIY 344


>gi|227327215|ref|ZP_03831239.1| putative taurine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 257

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V     
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GA A     +     VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +++LP   P   T    A G  W + I +E+ +       T+G+G
Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++ + +  R LSA  ++++       L   S  +  V  P +  ++ +P +  +   
Sbjct: 57  SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV+         IG E +  F IF +   ++      ++  + R    V+++   S  Q 
Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQI 168

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           F+++ +P ++P L   + +++  GW  ++A+EM+
Sbjct: 169 FFHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMV 202


>gi|119488909|ref|ZP_01621871.1| Binding-protein-dependent transport systems inner membrane
           component [Lyngbya sp. PCC 8106]
 gi|119455070|gb|EAW36212.1| Binding-protein-dependent transport systems inner membrane
           component [Lyngbya sp. PCC 8106]
          Length = 270

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-NL 126
           T +  ++A V+ LL     A L A+S+ +   L P   I+Q++P+       +++   N 
Sbjct: 75  TVVAFITAAVLGLLI----AMLMAQSKWIEKSLYPYAVILQTVPLAAIAPLIIIWLRNNT 130

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +   V+ A + A F I +    N TF     L ++  +L ++ R ++ S WQ   YL +P
Sbjct: 131 FAALVLCAWIVAFFPIIS----NTTF----GLNSVDSNLRDLFRLYKASRWQTMLYLRLP 182

Query: 187 FSMP 190
            ++P
Sbjct: 183 SALP 186


>gi|149915311|ref|ZP_01903838.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
 gi|149810600|gb|EDM70441.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
          Length = 278

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 16/118 (13%)

Query: 91  AKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           A + R G+   L P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + +
Sbjct: 117 ATAHRPGLYRGLRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI 171

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
             +T   +  + + P+ L E +++F  +  Q  W + +P+++P    GL   +M+S+S
Sbjct: 172 -RLT---HLGISSTPKPLLEAAQAFGATPRQTLWKVELPYALPQIMAGLNQTIMLSLS 225


>gi|281358476|ref|ZP_06244957.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281315099|gb|EFA99131.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 279

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A L   S RL  V++P+LDIMQ++P   +L   + +F          +  A +FA     
Sbjct: 111 AVLMTFSGRLKKVVLPLLDIMQTMPAYVYLVPAIAFFSI--------SNTAGVFATVVFA 162

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMS 201
           +  +       + N P+DL E S +F  +   + + L +P ++     GL   +M+++S
Sbjct: 163 LPPIVRMTVLGIENTPKDLLECSEAFGATPMNRLFDLELPTALTSIRAGLNQTVMLALS 221


>gi|184157612|ref|YP_001845951.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874575|ref|ZP_08442476.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209206|gb|ACC56604.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|332737213|gb|EGJ68139.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 314

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|218531936|ref|YP_002422752.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524239|gb|ACK84824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 353

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y   P + + ++
Sbjct: 171 ISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F  Q  ++ N             E A +      R  R +I+P + P          G
Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  +I +      F  V   +L++    +A +
Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335


>gi|86751168|ref|YP_487664.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86574196|gb|ABD08753.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 256

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 19/172 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++  +++P +  +   +VYF           E+A +  +F +  +     MY+ +  I
Sbjct: 97  PMINFFRALPPIALIPLVIVYFGV--------DEVAKLVILFYASFFAGVIVMYEGVSQI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                 V+ +   S ++ F  + +P ++P ++  + +++   W  +VASE+I        
Sbjct: 149 TPLYIRVAHTLGASEFEIFRKVIIPLTVPHILTALRVALGVAWATLVASELIAAQR---- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSNK 269
             G+G+ I  A     LL ++Y  +  +G I L   L+ R     ++VW  +
Sbjct: 205 --GLGAMIQNA-STYFLLDVIYVGIICIGCIALIMDLILRRISARLLVWQER 253



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 11/186 (5%)

Query: 389 RVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           R V+L +IA I + +PVG  +G+     +   P      A P     PLV+    Y+ ++
Sbjct: 65  RRVLLGVIAGIAVAVPVGFVLGWYRGARTFADPMINFFRALPPIALIPLVIV---YFGVD 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               L +L  + + +  +  +  G S     +  VA +   + +  +R +I+P   P+ +
Sbjct: 122 EVAKLVILF-YASFFAGVIVMYEGVSQITPLYIRVAHTLGASEFEIFRKVIIPLTVPHIL 180

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           T    A G AW   + SE+ +         GLGA I  ++       + +G++ + C  L
Sbjct: 181 TALRVALGVAWATLVASELIA------AQRGLGAMIQNASTYFLLDVIYVGIICIGCIAL 234

Query: 568 ALNRFL 573
            ++  L
Sbjct: 235 IMDLIL 240


>gi|117928095|ref|YP_872646.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
 gi|117648558|gb|ABK52660.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
          Length = 276

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+F V+V ++IA +    +G+ +G    +   +  +   L A P     PL+     Y  
Sbjct: 84  TLFAVIVGLLIALVGGSLLGLVVGRLSDVQRVLGMYVSGLYAMPIIALVPLITVWFGYSA 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   ++++      I+++V  GA A P    EV+  +    WR W  ++LP   PY
Sbjct: 144 TT----RLVVIVIEAGLPIVYSVAEGARAVPVMHIEVSRLYRAPWWRVWGGVVLPAAVPY 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            + G   A G A   ++ +E  +  H      GLG Y+       SF E
Sbjct: 200 VLAGVDLAIGRALIGAVAAEFIAAVH------GLGYYVLSHVN--SFKE 240


>gi|257461050|ref|ZP_05626148.1| abcb protein [Campylobacter gracilis RM3268]
 gi|257441424|gb|EEV16569.1| abcb protein [Campylobacter gracilis RM3268]
          Length = 265

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 150 MTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           MTF S  Q++ ++  +  E+  S++ S ++K  YL  P  +  L+  + +++S G   +V
Sbjct: 148 MTFASAAQAMASVSAEYTELFDSYKSSFFKKLRYLYAPHLIERLLPAIYVAVSNGAKVLV 207

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            +E++   D      GIG+ IA A    D + ++  +   +    L+D L+ +P+
Sbjct: 208 MAELLGAND------GIGAKIAEARVNIDTVEVMAYVCLAIAFTALFDYLVTKPL 256


>gi|324326754|gb|ADY22014.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 278

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 85/175 (48%), Gaps = 25/175 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147
           L +++ R    L P LD MQ++P   +L   + +F + + PG +     + IFA+  +  
Sbjct: 115 LTSQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203
             + F+    +  +P DL E + +F  +  QK + + +P +    M G+  ++M+S+S  
Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    +VV  +++  PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|325277750|ref|ZP_08143314.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324097124|gb|EGB95406.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 224

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 89  LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           LAA+  +RRL   L+P+LD+MQ++P   +L   ++ F     GKV      A+FA     
Sbjct: 62  LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 110

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +       L  I   L + +     S WQ+   + +P ++P    GL  ++MM++S 
Sbjct: 111 LPPLVRLTQLGLSQIDPSLLKAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 169

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 170 ---MVVVASMI 177


>gi|317057977|gb|ADU90694.1| putative integral membrane subunit [Collimonas sp. MPS11E8]
          Length = 404

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGF----LT 117
            +  LR L  ++ S+L   V  +    L+ +S+RL  +L P+L+++Q+IP +      + 
Sbjct: 196 DQALLRHLQLVLFSVLPAVVIGSSLGVLSFRSQRLSRLLFPLLNVIQTIPSIALFGLLIG 255

Query: 118 FTVVYFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  + L    + G  +A A+ A+    +  MT S    L  +P  + E +R   +S 
Sbjct: 256 PLTLLGLLLPRTGISGVGMAPALLALMLYSLLPMTRSAVAGLEQVPASVREAARGIGMSA 315

Query: 177 WQKFWYLGVPFSMP 190
           WQ F+ + +P ++P
Sbjct: 316 WQIFFRVELPLALP 329


>gi|170737497|ref|YP_001778757.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169819685|gb|ACA94267.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|299770706|ref|YP_003732732.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
 gi|298700794|gb|ADI91359.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
          Length = 314

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|227513671|ref|ZP_03943720.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227083187|gb|EEI18499.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
          Length = 275

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 75  AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127
           A VIS  F   T VY T     +R   +L P+ +++  IP  + GF+  +VV  +  N++
Sbjct: 64  AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 122

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+  F +F   +  +      SL ++P    + S +   + WQ  W + +  
Sbjct: 123 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 181

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + PG++  ++  M+  +   +A +M++   +++P
Sbjct: 182 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 215


>gi|83648076|ref|YP_436511.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83636119|gb|ABC32086.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 273

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PIL  +  IP L  L    + F++L  G     EL  +  IF      MT  M  S+ + 
Sbjct: 117 PILTFIAMIPPLALLP---ILFISLGIG-----ELGKVALIFIGVFPIMTRDMALSVRSF 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           PR+    +++   S     + + +P  MP L+  + +S+   W F++ASE I   +
Sbjct: 169 PREQVVKAKTLGASDLAVVYKILLPQMMPRLITALRLSIGSAWLFLIASEAIAATE 224


>gi|293392812|ref|ZP_06637130.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291424671|gb|EFE97882.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 284

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 16/129 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           LAA+S R+  V++P++D+MQ++P   +L   ++ F     GKV       I+A  T  + 
Sbjct: 116 LAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLF---GLGKVPAILATVIYA--TPPLI 170

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
            +T      +  + +++ E   +F  + WQK + + +P ++P    G+    MMS+S   
Sbjct: 171 RLT---DLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLS--- 224

Query: 205 FFVVASEMI 213
             VV + MI
Sbjct: 225 -MVVVASMI 232


>gi|259418394|ref|ZP_05742312.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259345789|gb|EEW57633.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 269

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 18/156 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 112 LVPVMAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 162

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+  G  
Sbjct: 163 DNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAQ 220

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252
                GIG+YI  A    DL  +     +L++LGV+
Sbjct: 221 Y----GIGAYILEAGSLYDLERLFAGVVILSLLGVL 252


>gi|15893404|ref|NP_346753.1| sulfate ABC transporter permease [Clostridium acetobutylicum ATCC
           824]
 gi|15022933|gb|AAK78093.1|AE007523_8 ABC-type probable sulfate transporter, permease protein
           [Clostridium acetobutylicum ATCC 824]
 gi|325507516|gb|ADZ19152.1| ABC-type probable sulfate transporter, permease protein
           [Clostridium acetobutylicum EA 2018]
          Length = 265

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/193 (17%), Positives = 86/193 (44%), Gaps = 14/193 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++   +I+L      A +  K + +   L P++  +Q++P + ++ F ++++       
Sbjct: 73  RLVIGYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGI----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + IF      ++++  S    + N+     + +R+    G   ++ + +P ++P
Sbjct: 128 ---DERSIIFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M    S  W  ++A EM+          G+G  +    +  D+  ++  M+ ++ 
Sbjct: 185 EIISGMRQGWSFAWRALMAGEMLS------ATKGLGQVLTAGRELGDISQVMAVMIIIIA 238

Query: 251 VIFLYDQLLFRPM 263
              ++D+LLF  +
Sbjct: 239 FGLIFDKLLFEKV 251



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 13/231 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F  + GV     + S G + N   Y  +D    I  G  ++ R+V+  IIA  I I + +
Sbjct: 32  FVDILGVWKAYTFPSPGEVYNALAYLVKDNTLFIATGA-SLTRLVIGYIIALFIGIALAL 90

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                 ++   + P    L   P+  + P     + +Y ++    +  + + G+ + I  
Sbjct: 91  VCIKYKYVDENLTPLMLGLQTLPSVCWIPF---AILWYGIDER-SIIFVTVVGSLFSIAI 146

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           + I+G       + + A +    G   +  +++P   P  ++G       AW A +  E+
Sbjct: 147 STISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEIISGMRQGWSFAWRALMAGEM 206

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            S       T GLG  +    E G   +V+  ++I+  F L  ++ L+  +
Sbjct: 207 LS------ATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIFDKLLFEKV 251


>gi|317053575|ref|YP_004118709.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952680|gb|ADU72153.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 288

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 9/122 (7%)

Query: 93  SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           S R+G  L+  L  M   +P +  L  ++++F       +  A L  +F I  S +W M 
Sbjct: 115 STRIGRDLLSTLTAMFNPLPAIALLPLSLLWF------GLGNASL--VFVIVHSVIWPMA 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +     +   L+   R++ L GW+   ++ +P ++P L+  + +  +  W  ++A+E
Sbjct: 167 LNTWSGFMGVSDTLKMAGRNYGLKGWRYVAWILIPAALPALLSGLKIGWAFAWRTLIAAE 226

Query: 212 MI 213
           ++
Sbjct: 227 LV 228


>gi|237718414|ref|ZP_04548895.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293371417|ref|ZP_06617848.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CMC 3f]
 gi|299149069|ref|ZP_07042131.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_23]
 gi|229452347|gb|EEO58138.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292633614|gb|EFF52172.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CMC 3f]
 gi|298513830|gb|EFI37717.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_23]
          Length = 398

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150
           L PI++++  IP  + GF    V+        NL  G+  + G+ + AI A+ T  +  +
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPT--IITV 269

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A 
Sbjct: 270 T---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326

Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            M+     VI      PL  I + IA  + E       Y  L +LGV+  +  L+    +
Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSV 386

Query: 265 VWSNKFRLERT 275
            + +   L+R+
Sbjct: 387 EYISSKGLKRS 397


>gi|168702980|ref|ZP_02735257.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Gemmata obscuriglobus UQM
           2246]
          Length = 503

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 66  SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +R  L++ L +++ ++L       LAA+   LG V +    ++Q++P L  L F ++  M
Sbjct: 307 TREHLKLVLPSLLAAVLVAVPLGVLAARRPALGRVALGATGVLQTVPSLALLLF-MIPVM 365

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                +  G    AI A+F   +  +  + +  L +IP  L E + +  LS W   W + 
Sbjct: 366 KWLVDEGTGP-APAIAALFLYSLLPIVRNAHAGLTSIPAPLRESAAALGLSPWAILWRIE 424

Query: 185 VPFSMP 190
           +P + P
Sbjct: 425 LPLAAP 430


>gi|297155659|gb|ADI05371.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 269

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 18/148 (12%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V ++I ++  + + +  G        +    Q+L   P     PL +      
Sbjct: 74  VSVQRVLVGLLIGAVAGVSLALVSGLSRLGEDLVDATVQMLRTIPWVGMIPLFI------ 127

Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                +WL +       L+  G  +++  NV AG         E  +S  +  W   R++
Sbjct: 128 -----IWLGIGEAPKIALISLGVTFHLYLNVYAGIRGVDAQLIEAGTSLGLGRWGLIRHV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSE 525
           +LPG  P  +TG   +   AW A +  E
Sbjct: 183 VLPGALPGAMTGLRYSLATAWLALVFGE 210


>gi|229593224|ref|YP_002875343.1| putative aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229365090|emb|CAY53295.1| putative aliphatic sulfonates ABC transport system, permease
           protein [Pseudomonas fluorescens SBW25]
          Length = 262

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 83/175 (47%), Gaps = 19/175 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 99  VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNVDP 150

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E+SRS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 151 ALVEMSRSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 204

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274
           GIG Y+A+  +E    D++ +   M  +LG +  L  + L R  + W   +++ +
Sbjct: 205 GIG-YLAMNAREFLQTDVVVLAIVMYAILGKLADLAARGLERVWLRWHPAYQVNK 258



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E++ S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFRQVILPGALPSILVGVRFAL 187

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573
           G  W   IV+E  S       ++G+G Y+A +  +    +VV+  ++M   +  L     
Sbjct: 188 GFMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVLAIVMYAILGKLADLAA 240

Query: 574 ---------WHPLY 578
                    WHP Y
Sbjct: 241 RGLERVWLRWHPAY 254


>gi|327480609|gb|AEA83919.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 292

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 15/212 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQDVLY 378
           IR         L +   +S    ++W     G+A  +   S G ++      +T + +L 
Sbjct: 38  IRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPGAVLERIGRWWTSEGLLG 97

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437
            I    I+++RV+     +++I +P+G++IG +RP + + ++P    +   PA  F PLV
Sbjct: 98  DI---GISVWRVMAGFGASALIALPLGLYIGTYRP-VQAFLEPLTDFIRYMPAVAFIPLV 153

Query: 438 VSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +  V     +      +L+IF GT + ++  V       P    E A +         + 
Sbjct: 154 MLWVGIDEGS-----KVLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRSEIVKL 208

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +ILP   P  +      CG AW   +V+E+ +
Sbjct: 209 VILPSAKPALLDTLRITCGWAWTYLVVAELVA 240


>gi|323138299|ref|ZP_08073370.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
 gi|322396382|gb|EFX98912.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
          Length = 268

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+VI+ +     A L A+S+ L   L+P   ++Q  PI+      +VY +      ++
Sbjct: 73  LKALVIATVCGVALALLLAQSKWLERALLPFAIVLQVTPIIAIAPLLLVY-LQPRTAVLV 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            A L A F I +    N +      L ++   L ++   +R S WQK  YL +P ++P
Sbjct: 132 CAFLVAFFPILS----NTSL----GLASVDHGLRDLFDLYRASPWQKLVYLRLPAALP 181


>gi|283781062|ref|YP_003371817.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Pirellula staleyi DSM 6068]
 gi|283439515|gb|ADB17957.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Pirellula staleyi DSM 6068]
          Length = 516

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 12/126 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYA-TLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVY 122
           RTTL  L  + ISL    V A  L   S R   LG V++  + I+Q++P L  L F +  
Sbjct: 317 RTTLEHLRLVAISLFAAIVIAIPLGIASFRYPKLGYVILGAVGIIQTLPSLAVLVFMI-- 374

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P   +GA L AI A+F   +  +  S Y  L +IP +L E +    L    + W 
Sbjct: 375 -----PLLGLGA-LPAIAALFLYSLLPIVRSTYTGLRDIPANLRESATVLGLDQRAQLWQ 428

Query: 183 LGVPFS 188
           + +P +
Sbjct: 429 VELPLA 434


>gi|260173871|ref|ZP_05760283.1| putative ABC transporter permease protein [Bacteroides sp. D2]
 gi|315922134|ref|ZP_07918374.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696009|gb|EFS32844.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 398

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150
           L PI++++  IP  + GF    V+        NL  G+  + G+ + AI A+ T  +  +
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPT--IITV 269

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A 
Sbjct: 270 T---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326

Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            M+     VI      PL  I + IA  + E       Y  L +LGV+  +  L+    +
Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSV 386

Query: 265 VWSNKFRLERT 275
            + +   L+R+
Sbjct: 387 EYISSKGLKRS 397


>gi|148989520|ref|ZP_01820879.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925063|gb|EDK76144.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP6-BS73]
          Length = 305

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P + +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   VV  +  +++ G   G  L+ I  +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|33594538|ref|NP_882182.1| ABC transport system permease protein [Bordetella pertussis Tohama
           I]
 gi|33564614|emb|CAE43932.1| ABC transport system permease protein [Bordetella pertussis Tohama
           I]
 gi|332383949|gb|AEE68796.1| ABC transport system permease protein [Bordetella pertussis CS]
          Length = 256

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+V    A+ + IP+GI++G      +   P    L   P+  + PL    + ++ +  
Sbjct: 70  RVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPL---SLLWFGITE 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               S++ + GT    L  VI             AS+   +G +  R +ILP   P   +
Sbjct: 127 TQKYSIVFM-GTFAPALLYVIEATRNIDPLLIRAASNLGASGPQVMRSVILPASLPQIFS 185

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G     G +W   I +E+ +         GLG  I    E      VVLG+ ++   VL 
Sbjct: 186 GFKVILGLSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLV 239

Query: 569 LN 570
            +
Sbjct: 240 TD 241


>gi|332971534|gb|EGK10484.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Kingella kingae ATCC 23330]
          Length = 266

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V ++ A +I +P+G  +G    +   + P  Q L       + P+VV       
Sbjct: 79  SLQRVGVGLLAALMIGVPIGFALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGI-- 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  L+ F   W I+ N ++G       + E+  S   T       I+LP +   
Sbjct: 137 --GDAPIYFLLAFAAVWSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVVGD 194

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G  W   +  E+           GLG +I ++ ++ ++ E++  ++++   
Sbjct: 195 ILNGLRLAIGIVWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIGVI 248

Query: 566 VLALN 570
             AL+
Sbjct: 249 GWALD 253


>gi|294495009|ref|YP_003541502.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Methanohalophilus mahii DSM 5219]
 gi|292666008|gb|ADE35857.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalophilus mahii DSM 5219]
          Length = 259

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 60/114 (52%), Gaps = 13/114 (11%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM---TFSMYQSL 158
           P+++I++ IP L ++ F +V+F            ++A F +F   V+ +   T + ++S+
Sbjct: 97  PLIEIVRPIPPLAWIPFAIVWFGL--------THISAGFVVFVGAVFPIIINTLTGFKSV 148

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  +  +V    + +   +  Y+ +P+S+P +   + ++M  GW  +VA+EM
Sbjct: 149 SKVYVEAGKVLGCMKSTSLIR--YIALPYSLPSIAAGIRIAMGVGWMCLVAAEM 200


>gi|209518161|ref|ZP_03266989.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209501368|gb|EEA01396.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 289

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L+E +R F    WQ+  Y+ +P ++P L   + ++ +  W  +V 
Sbjct: 169 VTLSTMQGFRQTPAALDEAARVFGYGRWQRIAYVVLPAAVPTLATGVRLAFTKAWLALVV 228

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 229 VELVASSE 236


>gi|167033367|ref|YP_001668598.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166859855|gb|ABY98262.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 282

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 89  LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           LAA+  +RRL   L+P+LD+MQ++P   +L   ++ F     GKV      A+FA     
Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +       L  I   L + +     S WQ+   + +P ++P    GL  ++MM++S 
Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 228 ---MVVVASMI 235


>gi|307945113|ref|ZP_07660449.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4]
 gi|307770986|gb|EFO30211.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4]
          Length = 420

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 15/160 (9%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK        I  +F + +W MT +    +  +
Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFGIWETGK--------IALLFLAALWIMTIAARAGVSGV 314

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S  Q  W++ VP S+P +     ++M   W  VVA+E++        
Sbjct: 315 NITKVHAAYSLGASKTQILWHIIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA------ 368

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G G  I  A K Q L  I+   + ++G++     +L R
Sbjct: 369 QKGAGMMIIAASKFQ-LTDIVLMGIILIGIVGYSIDILMR 407


>gi|296126609|ref|YP_003633861.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296018425|gb|ADG71662.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 266

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYAT-LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           + LR++    I+ +F F++   L  K  R       I++ M+++P +  +   +++F   
Sbjct: 72  SLLRVIIGFSIAFVFAFIFGMILGIKPERFEY-FRNIIEFMRNVPPISLIAILILWFGIG 130

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+I   LA+ F IF         ++ QS+  + + L EV  S   +  + F+ + +P
Sbjct: 131 EKSKIIIIILASFFPIFI--------NIRQSIGTVDKKLIEVGYSLGFTKLKIFFKIMLP 182

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++P ++  M + +   +  ++ +EMI
Sbjct: 183 SALPSILAGMKIGLGYSFRAIIGAEMI 209


>gi|222082005|ref|YP_002541370.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726684|gb|ACM29773.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 258

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 29/237 (12%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S ++D F+F       + I  Q   +I +H  Y+ V        IT+   V+  +I + +
Sbjct: 27  SGVIDRFFFPA----PLDIVKQVTTWISDHGFYKHV-------GITLGETVLGYLIGTGL 75

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +  G+W+G  P ++  + PF + + A P  V  P+ V       L   LW  + +    
Sbjct: 76  GVAAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFV-----LWLGLGLWSKVALAVTL 130

Query: 461 QWYI-LFNVIAGASAFPNDFKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGG 516
            +++  FN + G          + S+  I G +     R++  P    + ++   T+ G 
Sbjct: 131 VFFVTFFNAMQGVREVN---PVILSNTRILGAKRSDLLRHVYFPAAATWILSSLRTSVGF 187

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A   +I+ E          + GLG  IA S        V  G++I+  FVL ++  L
Sbjct: 188 AVVGAIIGEYLG------ASAGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLIL 238


>gi|150397263|ref|YP_001327730.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150028778|gb|ABR60895.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 303

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 132 IGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           +G E+ AI AI    VW+ T      +Y +LC +  +  E +R    + WQ   Y+ +P 
Sbjct: 153 LGMEVGAIVAIVIVDVWHWTPVAFLMLYTALCAVDEEAVEAARCDGANEWQVIRYVKIPM 212

Query: 188 SMPGLV 193
            MP ++
Sbjct: 213 LMPAIL 218


>gi|291616804|ref|YP_003519546.1| YehY [Pantoea ananatis LMG 20103]
 gi|291151834|gb|ADD76418.1| YehY [Pantoea ananatis LMG 20103]
          Length = 393

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 26/226 (11%)

Query: 57  DVHSLPQYASRTT---------LRMLSAMVI-SLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D+  L +YA+R +         L +L+A V+ +LL  F    +  +       +  +L++
Sbjct: 166 DLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFPLGVVLYRRSGWQSSVFGVLNV 225

Query: 107 MQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSMYQSL 158
           +Q++P   + G L   +      +P  G   + G  +A A+ A+    +  +  S+   L
Sbjct: 226 VQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAPALIALVLYALLPLVRSVVTGL 285

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +P D+ E +R   LSG Q+F+ + VP ++P  VW     +SG    VV +  + V   
Sbjct: 286 QQVPPDVRESARGMGLSGRQQFFAVEVPLALP--VW-----LSGIRVVVVQTLGMAVVAA 338

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
           +I   G G+ I   +    L  +L  ++ ++ +    D  LFR +I
Sbjct: 339 LIGAGGFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA-LFRMLI 383


>gi|288574240|ref|ZP_06392597.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569981|gb|EFC91538.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 257

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 24/182 (13%)

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           FRV+    I++   +P+G  +G  P       P    L   P     P+++         
Sbjct: 64  FRVLTGFAISTATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPMLI--------- 114

Query: 448 PNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             LW  +       ++I  T + +L N   G  +      EV   F ++  R +  I+LP
Sbjct: 115 --LWFGIGEPSKIVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFMEILLP 172

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  + G       +W + I +E+ +       ++G+G  I ++ +      +VL V+
Sbjct: 173 SALPSVLVGMRVGLSYSWRSLIGAELIA------ASSGIGYAIHDAEQLSRSDVIVLWVI 226

Query: 561 IM 562
           +M
Sbjct: 227 LM 228


>gi|239917512|ref|YP_002957070.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|281413998|ref|ZP_06245740.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|239838719|gb|ACS30516.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
          Length = 307

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L  +  +P + ++   V++F          ++  A F + T  V  +   +      +
Sbjct: 140 PLLTALMVLPNVAWVPLAVLWFGL--------SDATAYFVMLTGAVPAVVAGLTTGTDQV 191

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L   +R    S  +    + +P ++P  V  +    +  W  ++A+E+I VG    P
Sbjct: 192 PPQLRRAARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEIIAVGG---P 248

Query: 222 LP-GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +  G+G+ +     E DL  +L A+L +L V  L +  +F P+
Sbjct: 249 MGVGLGTLLHQGRTESDLAVVLCAVLAILAVGVLVELTVFGPV 291


>gi|56709017|ref|YP_165062.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Ruegeria pomeroyi DSS-3]
 gi|56680702|gb|AAV97367.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Ruegeria pomeroyi DSS-3]
          Length = 524

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 12/115 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            KSRR   +  P+LD MQ++P   +L   + +F    P  V+   + A+  +       M
Sbjct: 360 GKSRRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIFAMPPVVRLTALGM 419

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
                     +P   +E + +F  S WQ  + + +P ++P    G+   ++MS+S
Sbjct: 420 R--------GVPETTKEAAIAFGCSPWQLLFNVELPLALPSIMTGINQTILMSLS 466


>gi|227114854|ref|ZP_03828510.1| putative taurine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 257

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V     
Sbjct: 63  AVSVARALGAFSVAIILGVPLGLLMGLSPPIAAIFNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GA A     +     VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +++LP   P   T    A G  W + I +E+ +       T+G+G
Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209


>gi|226364422|ref|YP_002782204.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242911|dbj|BAH53259.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 295

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ R ++   +A +I IP+GI I  +RP +S  + P  +L     A    P+ +  +   
Sbjct: 106 SLSRALIGFFVAVVIAIPLGIAIAWYRP-VSDFLNPILELFRNTAALALLPVFILILGIG 164

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+I+   + IL N I+G         + ASS  ++  R ++ ++LP   P
Sbjct: 165 EESKIA----LVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVP 220

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    I +E+           GLG  I  S      P +  G++ +  
Sbjct: 221 TIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISV 274

Query: 565 FVLALNRFL 573
             L+LN  L
Sbjct: 275 LGLSLNAVL 283


>gi|22537151|ref|NP_688002.1| phosphate ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|25011080|ref|NP_735475.1| hypothetical protein gbs1026 [Streptococcus agalactiae NEM316]
 gi|76788397|ref|YP_329707.1| phosphate ABC transporter permease [Streptococcus agalactiae A909]
 gi|76797783|ref|ZP_00780049.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae 18RS21]
 gi|77405680|ref|ZP_00782767.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77411994|ref|ZP_00788323.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413610|ref|ZP_00789796.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|22534014|gb|AAM99874.1|AE014237_8 phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23095479|emb|CAD46685.1| unknown [Streptococcus agalactiae NEM316]
 gi|76563454|gb|ABA46038.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae A909]
 gi|76586859|gb|EAO63351.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae 18RS21]
 gi|77160319|gb|EAO71444.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77161950|gb|EAO72932.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77175676|gb|EAO78458.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 305

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P ++++  IP  + GF+   ++  +  +++ G   G  L+ +  +F   +  +TF  
Sbjct: 118 ILQPAVELLVGIPSVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             SL  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V
Sbjct: 177 VDSLRAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVV 236

Query: 215 VGDTVIP 221
               ++P
Sbjct: 237 GNSAILP 243


>gi|328886649|emb|CCA59888.1| Predicted rhamnose oligosaccharide ABC transport system, permease
           component 2 [Streptomyces venezuelae ATCC 10712]
          Length = 352

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM---YQSLCNIPRDLEEVSRSFRLSGWQK 179
           F+ L PG  IG     I+A+    VW     M      L  +PR+L E ++      W++
Sbjct: 193 FLGLEPGGWIGDPDRIIYALVALTVWQFGAPMVIFLAGLKQVPRELYEAAQVDGAGPWRR 252

Query: 180 FWYLGVPFSMPGLVWNMMMS 199
           FW + +P   P L +N+++ 
Sbjct: 253 FWSITLPMISPVLFFNVLLE 272


>gi|298484081|ref|ZP_07002249.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           D22]
 gi|295087666|emb|CBK69189.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Bacteroides xylanisolvens XB1A]
 gi|298269762|gb|EFI11355.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           D22]
          Length = 398

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L PI++++  IP  + GF    V+      L+   V  + LA    +    +  +     
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A  M+  
Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331

Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              VI      PL  I + IA  + E       Y  L +LGV+  +  L+    + + + 
Sbjct: 332 NAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391

Query: 270 FRLERT 275
             L+R+
Sbjct: 392 KGLKRS 397


>gi|152981359|ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281436|gb|ABR89846.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 296

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I +++ I  G+++G   H  +  +P  Q L A P+  + PL+   + ++ ++    ++L+
Sbjct: 110 IGAVLAILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLL---LLWFGIDETPKITLI 166

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I G  + I   +++G         E+   + ++     R I+LP   P   TG      
Sbjct: 167 AI-GAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLS 225

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            AW   + +E+ +       T G+G Y+     + S P+VVL  + +   +  L   L
Sbjct: 226 LAWMFLVAAELIA------ATKGIG-YLLTDGRETSRPDVVLAAIFLLAILGKLTDGL 276



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 9/171 (5%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P +IV  +   L+   L  + S +  R+ S   I  +   ++      S+       P  
Sbjct: 78  PSEIVQTLSALLE-QGLLVHISASVARVFSGYAIGAVLAILFGLFVGLSKHAEAFFEPTF 136

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +++IP L ++   +++F      K+    + A F I+          +   + N+ R 
Sbjct: 137 QALRAIPSLAWVPLLLLWFGIDETPKITLIAIGAFFPIY--------LGLVSGIRNVDRK 188

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           L E+   + LS       + +P ++P L   +   +S  W F+VA+E+I  
Sbjct: 189 LIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLSLAWMFLVAAELIAA 239


>gi|148545510|ref|YP_001265612.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148509568|gb|ABQ76428.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313496603|gb|ADR57969.1| SsuC [Pseudomonas putida BIRD-1]
          Length = 265

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ R  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264


>gi|114319894|ref|YP_741577.1| binding-protein-dependent transport systems inner membrane
           component [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226288|gb|ABI56087.1| binding-protein-dependent transport systems inner membrane
           component [Alkalilimnicola ehrlichii MLHE-1]
          Length = 282

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 32/158 (20%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           ++  L+ ++ R   V+ P+LD MQ++P   +L   V +F            L  + A+F 
Sbjct: 117 IWGGLSGRAHR---VMTPVLDFMQTMPAFVYLIPAVPFF-----------GLGPVAAMFA 162

Query: 145 SQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMM 197
           + +++M  ++  +   I   P +L E + +F  +  QK + + +P ++P    G+   +M
Sbjct: 163 TVIFSMPPAIRLTTLGIRQVPAELVEAADAFGATRRQKLFKVQLPLAVPTIMAGINQTIM 222

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +++S     VV + MI  G       G+GS +  AI+ 
Sbjct: 223 LALS----MVVIAAMIGAG-------GLGSEVWRAIQR 249


>gi|332306215|ref|YP_004434066.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173544|gb|AEE22798.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 283

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+  + VIS+L   +   L     R   +    L I  ++P L  +    ++F    
Sbjct: 91  TLKRVAVSFVISMLLGVLIGVLMGTYTRFNKLTDTALIIALNVPALVTILLCYIWF---- 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V   E AAI A+  ++V  +   + +    +  DL  V++ +RLS W+ F  + +P 
Sbjct: 147 -GLV---ESAAIAAVVLNKVPTVVVMIREGARVVDSDLLAVAKVYRLSPWRTFLKVFLPQ 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P ++ +    +S  W  V+  E++   D      G+G  +    +  D+  IL     
Sbjct: 203 LYPFIMASARSGLSLIWKIVLVVELLGRSD------GVGFALNTQFQYFDITGILAYTCA 256

Query: 248 MLGVIFLYDQLLFRPM 263
            + +I   + ++FRP+
Sbjct: 257 FISIILCVEAVVFRPI 272



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 31/201 (15%)

Query: 357 IGIAWQSIGYIVN----------------HFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +GI WQ++ ++V                 H T  ++L  +W   +T+ RV V  +I+ ++
Sbjct: 49  VGIIWQAVAWLVASPDFPSCIAVLSSIHFHITQGEMLLNLW---VTLKRVAVSFVISMLL 105

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
            + +G+ +G     + K+   A ++A   PA V   L   C  ++ L  +  ++ +++  
Sbjct: 106 GVLIGVLMGTYTRFN-KLTDTALIIALNVPALVTILL---CYIWFGLVESAAIAAVVLNK 161

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++  +  GA    +D   VA  + ++ WR +  + LP ++P+ +  A +     W 
Sbjct: 162 VPTVVVM-IREGARVVDSDLLAVAKVYRLSPWRTFLKVFLPQLYPFIMASARSGLSLIWK 220

Query: 520 ASIVSEVASWGHIHLRTTGLG 540
             +V E+        R+ G+G
Sbjct: 221 IVLVVELLG------RSDGVG 235


>gi|330897252|gb|EGH28671.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 285

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R LS + I +    V A +   SRR  +VL   + ++++IP L  +   +++F       
Sbjct: 94  RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E   +  I     + +  +++  + NI   L E + +  LS  +  W++ +P S+P
Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
                +  S+   W  +V  E I
Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI 228


>gi|325067514|ref|ZP_08126187.1| glycine betaine ABC transporter, permease protein [Actinomyces oris
           K20]
          Length = 292

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133
           A + +L+F       AA+++ + +++ P+LD+MQ++P   +L  +V++F + + PG    
Sbjct: 104 ATLTALVFAVPLGIWAARNKYVSVLIRPVLDLMQTMPAFVYLIPSVLFFSIGVVPG---- 159

Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   +F + ++ M   +  +   +  + ++  E  RSF  + WQ    + +P ++P
Sbjct: 160 --------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVP 211


>gi|254438377|ref|ZP_05051871.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198253823|gb|EDY78137.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 345

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S R+  +++PILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 178 SRSDRVQRIMIPILDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 236

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +      + +D+ E + +F +S  QK + + +P ++P +       M+G    ++ S
Sbjct: 237 GIRL------VDKDVIEAADAFGMSKRQKLFNVQIPLALPNI-------MAGVNQTIMMS 283

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE 235
             +VV  +++  PG+G  +   I+ 
Sbjct: 284 LAMVVIASLVSAPGLGVLVLRGIRS 308


>gi|126739819|ref|ZP_01755510.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
 gi|126719051|gb|EBA15762.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
          Length = 421

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVVV  ++ SI+ IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     W +     AG S         A S   +  +  R++I+P   P 
Sbjct: 290 TGK----IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEV 526
             TGA  A G  W   + +E+
Sbjct: 346 IFTGARVAMGVCWGTVVAAEL 366


>gi|114769478|ref|ZP_01447104.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
 gi|114550395|gb|EAU53276.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
          Length = 343

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 42/190 (22%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +T   +L   +IS L         +K  RL   ++P+LD++Q++P       T VY
Sbjct: 147 EPAMQTFAVILVCTIISALLGVPIGIAMSKYNRLQRAIIPVLDLLQTLP-------TFVY 199

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-----SLCN-----IPRDLEEVSRSF 172
            + L            +F I  S+++ +   +Y       L +     + +D+ E   +F
Sbjct: 200 LIPLI----------FLFPIGESRLYGIAIVLYAIVPVIRLTDLGVRLVDKDVVEAGNAF 249

Query: 173 RLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            +S  QK   + +P ++P    GL   +MMS++          M+V+  +++  PG+G  
Sbjct: 250 GMSPAQKLGKVELPLALPNIMAGLNQTIMMSLA----------MVVIA-SMVTAPGLGVL 298

Query: 229 IALAIKEQDL 238
           +   I+  +L
Sbjct: 299 VLRGIRNLEL 308


>gi|316935677|ref|YP_004110659.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315603391|gb|ADU45926.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 277

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L ++  T+++F           + A+ F +F   V+ +  + Y ++  +
Sbjct: 118 PVIEALRPIPPLAWIPITILWFGL--------GDAASYFLVFLGAVFPVFIATYTAIRGL 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            R+    +       WQ F  + +P S+P ++  + +++  GW  VV +E+I
Sbjct: 170 DRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLRIALGVGWMCVVTAELI 221


>gi|118469424|ref|YP_888145.1| aliphatic sulfonates transport permease SsuC [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170711|gb|ABK71607.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 263

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 4/137 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RVV+ +++  +I + +G  +G    + + + P  Q++ A P     PL +       L P
Sbjct: 77  RVVIGLLLGGVIGVALGTAVGLSRWLEATVDPPMQMIRALPHLGLIPLFIVWFGIGEL-P 135

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   LL+  G  + +  N  +          E A     + W+ +R II+P   P  + 
Sbjct: 136 KV---LLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRTIIVPSAAPQVLV 192

Query: 509 GAITACGGAWNASIVSE 525
           G   +   AW   IV+E
Sbjct: 193 GFRQSLAIAWLTLIVAE 209


>gi|312958359|ref|ZP_07772880.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311287423|gb|EFQ65983.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 278

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 20/267 (7%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI------AWQS 363
           +  VK   RT+  +R      ++ + +   +  +L I+W     G+   +      A   
Sbjct: 8   ATAVKPAARTVIPVRRSLSTRWISVLT---LVVLLAIWWAVTATGLIEPLFLPPPSAVLQ 64

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
            G+++    Y D      LG  ++ R+ + +  A +  +PVGI IG        + P  +
Sbjct: 65  KGWLLATTGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIE 123

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P   + PL+V       L+  L L  L IF     I      G           A
Sbjct: 124 FYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAA 179

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   +  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  +
Sbjct: 180 QSLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMV 233

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +      VVLG+L++     A+ 
Sbjct: 234 QSAAQFLVTDVVVLGILVIALIAFAME 260


>gi|294853720|ref|ZP_06794392.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294819375|gb|EFG36375.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 272

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255


>gi|256811246|ref|YP_003128615.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
 gi|256794446|gb|ACV25115.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
          Length = 256

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 9/189 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV+   ++AS++ IP+GI +G    +++      ++L   P   + PL    ++++
Sbjct: 62  ISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAWVPL---SLAWF 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + +  ++  G  + IL N I+G    P    E A +    G      +++P   P
Sbjct: 119 GLG-EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGKDILIKVVIPASSP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G AW   + +E+     +     GLG  I  +        V+  ++I+  
Sbjct: 178 SILTGLRVGAGIAWMCVVAAEM-----LPSSNAGLGYLIMYAYSLSRMDVVIACMIIIGL 232

Query: 565 FVLALNRFL 573
             L L+R L
Sbjct: 233 IGLVLDRGL 241


>gi|222082431|ref|YP_002541796.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221727110|gb|ACM30199.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 303

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ A + A+       M   ++ +L  I R L E +R    +GWQ  W + +P + PG  
Sbjct: 172 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGANGWQVLWNVVIPLAKPG-- 229

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+ G  FVV   M       +   G  + IAL +K Q
Sbjct: 230 ------MAIGSIFVVTLVMADFSTVQVMSGGQSASIALMMKNQ 266


>gi|170724130|ref|YP_001751818.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762133|gb|ACA75449.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 265

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ R  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264


>gi|114569621|ref|YP_756301.1| glycine betaine ABC transporter substrate-binding protein
           [Maricaulis maris MCS10]
 gi|114340083|gb|ABI65363.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Maricaulis maris MCS10]
          Length = 525

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 17/202 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            LP   +   L  L+A+++ L  +     LAA   RL  V++    ++Q+IP L  L   
Sbjct: 11  ELPDLLAGHMLLSLAAILVGLSISLPLGILAASRPRLAAVVLNAASVIQTIPGLALLALM 70

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTS--QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           V        G +IG   A +  +  S   +   T    Q L  + R   E +R   ++  
Sbjct: 71  VPLL-----GGMIGYAPAFLALMLYSILPILRNTIVGLQGLDPVVR---EAARGIGMTPR 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++ W + +P ++P +V  +  ++   W    A+    VG +      +G+YI   ++ ++
Sbjct: 123 ERLWQVELPLALPVIVAGLRTAVV--WVVGAATLATPVGAS-----SLGNYIFAGLQTRN 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
            L++L+  L   G+    DQ++
Sbjct: 176 WLSVLFGCLFAAGLAIALDQII 197


>gi|291537099|emb|CBL10211.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis M50/1]
          Length = 263

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 10/164 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R+ +  + A ++ +P+GI +G      + I+P  + +   P   F PL++  V   
Sbjct: 69  ISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVG-- 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  ++++ I GT + ++  V   A A P+D      +      +    I++P + P
Sbjct: 127 -IEESAKITVIFI-GTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMP 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +       G AW   + +E+ +        TGLG  I +S  
Sbjct: 185 RLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQR 222


>gi|289191693|ref|YP_003457634.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanocaldococcus sp. FS406-22]
 gi|288938143|gb|ADC68898.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanocaldococcus sp. FS406-22]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 16/176 (9%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-----FMNLYPGKVIGAELAAIFAIFTS 145
           S ++  VL P+++I+ +IP  + GF+   ++       +N+ PG    +  AA   +   
Sbjct: 96  SEKVRNVLKPVVEILTAIPSVVYGFVGMVLLVPWIREILNVNPGY---SWFAASVILSIM 152

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +T     ++ N+P+ +++ S S   + WQ   Y+ +P S  G++  + ++M     
Sbjct: 153 ILPTITSISEDAIRNVPQSIKKASFSLGATHWQTIKYVILPHSFRGILAGIFLAMGRAVG 212

Query: 206 FVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +A  M+     +I      P+  + S+I L IKE  + + +Y  +   G+I L+
Sbjct: 213 ETMAVLMVAGNCPLIPKSIFDPVRPLTSHIILNIKEASVGSPVYYAMFACGIILLF 268


>gi|240144644|ref|ZP_04743245.1| binding-protein-dependent transport system inner membrane component
           [Roseburia intestinalis L1-82]
 gi|257203361|gb|EEV01646.1| binding-protein-dependent transport system inner membrane component
           [Roseburia intestinalis L1-82]
 gi|291540333|emb|CBL13444.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis XB6B4]
          Length = 260

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 10/164 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R+ +  + A ++ +P+GI +G      + I+P  + +   P   F PL++  V   
Sbjct: 69  ISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVG-- 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  ++++ I GT + ++  V   A A P+D      +      +    I++P + P
Sbjct: 127 -IEESAKITVIFI-GTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMP 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +       G AW   + +E+ +        TGLG  I +S  
Sbjct: 185 RLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQR 222


>gi|144899731|emb|CAM76595.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 270

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RRL   + P L  +++IP + ++   +++F      KVI   +   F I+         +
Sbjct: 104 RRL---IDPSLQALRNIPSIAWVPMFILWFGIFETSKVILIAVGVFFPIY--------LA 152

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           +  ++  + R L EV R FR S  +    + +P ++P  V  +   +  GW FVVA+E
Sbjct: 153 LSGAILGVDRKLVEVGRIFRFSHQEMITRILLPATLPTYVIALRSGLGLGWMFVVAAE 210


>gi|121610569|ref|YP_998376.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555209|gb|ABM59358.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 275

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 12/177 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV+   ++A+ + +P+GI +G    I +  +PF       PA+ F PL++      
Sbjct: 83  MTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG 142

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L+IF G+ + I   V     +   D  E A +           +++PG  
Sbjct: 143 EAQ-----KILVIFIGSVFQITLMVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAA 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++
Sbjct: 198 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGII 248


>gi|269967305|ref|ZP_06181368.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828083|gb|EEZ82354.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 299

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S  +  V+ P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSNHIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +++ E + +F  S  Q+ + + +P +MP    G+   +MM++S    
Sbjct: 186 LGIRL------VDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|304317033|ref|YP_003852178.1| ABC transporter inner membrane protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778535|gb|ADL69094.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 243

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 7/126 (5%)

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           G+ + I+  V +G     + + + A +    G++ +  +I+P   P  + G       AW
Sbjct: 120 GSIFSIILAVDSGIKNVNSIYLKAAKTMGAKGYKLYSNVIIPAALPNIIAGLKEGWSFAW 179

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
              I       G + +  TGLG  +++  +  +  +VV  +LI+    L +++F++  + 
Sbjct: 180 RGLIS------GEMLVSATGLGQILSKGKDASNISQVVAVMLIILSLGLVIDKFVFGRIE 233

Query: 579 LYGTRC 584
               RC
Sbjct: 234 -KSIRC 238


>gi|254303132|ref|ZP_04970490.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148323324|gb|EDK88574.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 250

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 25/199 (12%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPLVVS 439
            +++ RV+    ++S+  I +GI++G    IS KI+ F QL    +   P   + PL++ 
Sbjct: 58  SLSLRRVLGGFFLSSVFGILLGIFMG----ISQKIKEFFQLTLTAIRQIPMIAWIPLIIL 113

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 ++      ++++F   + I+ N ++G  +    + EVA  + ++    +  + L
Sbjct: 114 WAGIGEISK----IVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKETFFKVYL 169

Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           P   P   TG       +W A + SE +AS   I  R        A S  K         
Sbjct: 170 PSALPNIFTGLRLGLSSSWMAVVASELIASSSGIGYRLND-----ARSLMKSD------- 217

Query: 559 VLIMCCFVLALNRFLWHPL 577
           V+I+C  V+ L   L   L
Sbjct: 218 VVIVCMIVIGLIGLLMDKL 236


>gi|116751362|ref|YP_848049.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116700426|gb|ABK19614.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 200

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+    ++ P+L  ++ +PI+ ++  T+V+F  L  G  +       F I    V+ +  
Sbjct: 93  SKTAMQLIDPVLGTVRQVPIMAWVPLTIVWF-GLGDGPTV-------FLIAMVGVFPILL 144

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           +    + +I  D    +R+     W  F  + VP +MP ++  M +++S GW  V+
Sbjct: 145 NTVAGVQSISADYYNAARTMGAGPWSIFKDVMVPAAMPDILTGMRLAVSAGWMSVI 200


>gi|330939585|gb|EGH42900.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 285

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 19/204 (9%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R LS + I +    V A +   SRR  +VL   + ++++IP L  +   +++F       
Sbjct: 94  RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E   +  I     + +  +++  + NI   L E + +  LS  +  W++ +P S+P
Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLT 247
                +  S+   W  +V  E I   +T     GIG Y+A   ++    D++ I   + +
Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI---NTT---AGIG-YLASDARDFMRTDVIVICLLIYS 258

Query: 248 MLG-VIFLYDQLLFRPMIVWSNKF 270
           +LG VI    + L R  + W   F
Sbjct: 259 VLGLVIDAIIRTLERYALAWRPTF 282


>gi|297203214|ref|ZP_06920611.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197711296|gb|EDY55330.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 305

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LL       + A+ + +   + PIL  +QS+P + ++   V++         +G   + 
Sbjct: 117 ALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPPAVIW---------LGLNNSM 167

Query: 139 IFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           ++A I    V ++   +   +  +P       R+   +G +  W++ +P ++PG V  + 
Sbjct: 168 MYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWHVTLPAALPGYVAGLK 227

Query: 198 MSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              +  W  ++A+E+I    D  +   G+G  +       D+  +  A+L +L V    D
Sbjct: 228 QGWAFSWRSLMAAEIIAQFPDLGV---GLGQLLENGRTNSDMAMVFEAILLILFVGIAID 284

Query: 257 QLLFRPMIVWSNKFR 271
            L+F P+  W  + R
Sbjct: 285 LLIFSPLERWVLRSR 299


>gi|330467532|ref|YP_004405275.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Verrucosispora maris AB-18-032]
 gi|328810503|gb|AEB44675.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Verrucosispora maris AB-18-032]
          Length = 276

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 12/165 (7%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +PVG+ +G  P +   + P+ Q     P     P+    ++   L P     + +IF
Sbjct: 97  VIGVPVGLLMGCIPWLRLMLDPYIQFFRFVP-----PIAFVTLAIIWLGPGEASKVALIF 151

Query: 459 GTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            T  +I+  N +AG  A  +     A +   +  R    ++LP   P+ VTGA  A G +
Sbjct: 152 YTTVFIVALNTLAGVLAVDDLRLRAARALGASPLRTLVSVVLPSTVPHVVTGARLAMGNS 211

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           +   + +E+ +        +GLG+ I  +        V +G+L +
Sbjct: 212 FLTIVSAEIVA------AQSGLGSLIWTARNYAKTEWVFVGILAL 250


>gi|262278636|ref|ZP_06056421.1| taurine transport system permease tauC [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258987|gb|EEY77720.1| taurine transport system permease tauC [Acinetobacter calcoaceticus
           RUH2202]
          Length = 314

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|269795034|ref|YP_003314489.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097219|gb|ACZ21655.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 26/193 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+ +VI+++     A L +++R L   L P   I+Q+IPIL  +    ++F   +  +VI
Sbjct: 136 LTGLVIAVVLGISQAILMSQARWLERSLYPYAVILQTIPILALVPLIGLWFGFGFTSRVI 195

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+F + ++ ++ +     QS      DL  ++++ R    Q+ W L +P ++P +
Sbjct: 196 VCVIIALFPMISNTLFGI-----QSAEPAAHDLFTLNKATRA---QRLWKLQMPAAVPSI 247

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVI--PLPGIGSYIAL---AIKEQDLLAILYAMLT 247
                + +S G   + A    +VGD       PGIGS + +    ++ ++L       LT
Sbjct: 248 FAG--LKISAGLAVIGA----IVGDMFFRQGAPGIGSLLDVYRARVESENL-------LT 294

Query: 248 MLGVIFLYDQLLF 260
            +G+  L+  L+F
Sbjct: 295 AIGLASLFGVLVF 307


>gi|156934572|ref|YP_001438488.1| alkanesulfonate transporter permease subunit [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532826|gb|ABU77652.1| hypothetical protein ESA_02406 [Cronobacter sakazakii ATCC BAA-894]
          Length = 263

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G     +   E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +        
Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADLSA 242

Query: 567 LALNR--FLWHPLY 578
            AL R    WHP Y
Sbjct: 243 RALERVWLRWHPAY 256



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI  
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDS 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++    ILYA+L  L    L  + L R  + W   ++L+    
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLA--DLSARALERVWLRWHPAYQLKEANA 263


>gi|90420892|ref|ZP_01228797.1| ABC-transporter permease component [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334867|gb|EAS48639.1| ABC-transporter permease component [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 244

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 14/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV     IA II   +G+ +G          P+  L    PA     LVV  ++Y
Sbjct: 49  AMTLMRVAAAFAIAMIIGSAIGVGLGMDARADRFFDPWLILFLNIPA-----LVVIALAY 103

Query: 444 --YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             + LN    +  + I      ++  +  GA +      E+AS +    WR  R ++LP 
Sbjct: 104 IWFGLNEAAAVGAIAINKIP-NVVVTMREGARSLDRGLSEMASVYRFGRWRTLRDVVLPQ 162

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + PY+   + +     W  ++V E+        R+ G+G  I    +      ++   L 
Sbjct: 163 LQPYFAAASRSGIALIWKIALVVELLG------RSNGVGFQIHLYFQLFDVAAILAYTLA 216

Query: 562 MCCFVLALNRFLWHPLYLYGTR 583
               +L +   L  PL  + TR
Sbjct: 217 FVAIMLLIEFLLVQPLEAHATR 238



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 6/137 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AA+ AI  +++ N+  +M +   ++ R L E++  +R   W+    + +P   P    
Sbjct: 110 EAAAVGAIAINKIPNVVVTMREGARSLDRGLSEMASVYRFGRWRTLRDVVLPQLQPYFAA 169

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                ++  W   +  E++   +      G+G  I L  +  D+ AIL   L  + ++ L
Sbjct: 170 ASRSGIALIWKIALVVELLGRSN------GVGFQIHLYFQLFDVAAILAYTLAFVAIMLL 223

Query: 255 YDQLLFRPMIVWSNKFR 271
            + LL +P+   + ++R
Sbjct: 224 IEFLLVQPLEAHATRWR 240


>gi|29828100|ref|NP_822734.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29605202|dbj|BAC69269.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 268

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 34/71 (47%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++  G  + +  NV AG     +   E   S  ++ W   R+++LPG  P  +TG   + 
Sbjct: 139 IITLGVSFPLYLNVYAGIRGVDSQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 198

Query: 515 GGAWNASIVSE 525
           G AW A + +E
Sbjct: 199 GIAWLALVFAE 209


>gi|89895229|ref|YP_518716.1| hypothetical protein DSY2483 [Desulfitobacterium hafniense Y51]
 gi|89334677|dbj|BAE84272.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 252

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR+ V + I   + +P+G++IG        I P    L   P   + P+ +       
Sbjct: 62  SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFI------- 114

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LWL +       LM++   + +  N + G  +     KEVA +F +       ++ 
Sbjct: 115 ----LWLGIGEAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARIIHVY 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           LP   P++  G        W A + +E+ +       + GLG  + E 
Sbjct: 171 LPSAAPHFFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEG 212


>gi|13476102|ref|NP_107672.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
 gi|14026862|dbj|BAB53458.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
          Length = 659

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 15/161 (9%)

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           +++ P LD+MQ+IP   +L   ++ F N        + ++A+ A        M  +    
Sbjct: 182 LIVSPALDLMQTIPTFAYLIPMLLLFGN--------SPVSAMIATAIFATPPMVRATMLG 233

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P ++ E S     +  QK W + +P + P L+  +   +      V+ + MI  G 
Sbjct: 234 LTRVPLEIGEFSDMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 292

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G  + LA++   +   + A L ++ +    D+L
Sbjct: 293 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327


>gi|298250603|ref|ZP_06974407.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548607|gb|EFH82474.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 288

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 44/89 (49%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K++G   A I    T  +   T+ M   L +IP DLEE +     +  Q  W + VP ++
Sbjct: 142 KLVGTYPAVIITDLTFALPFATWLMVSYLGSIPVDLEEAALVDGATRLQALWRVIVPLAL 201

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           PG+V  ++ S   GW  V+ + ++   +T
Sbjct: 202 PGMVVALVFSFLAGWNDVLFASVLTSPET 230


>gi|220922642|ref|YP_002497944.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947249|gb|ACL57641.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 290

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/75 (21%), Positives = 39/75 (52%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +  S VW +  + +    ++P  L    R++ L+G    W + +P ++P ++  + +
Sbjct: 156 IFVLIHSVVWPLALNTFAGFQSVPETLRMAGRNYGLTGLAYVWQILIPAALPAILSGLKI 215

Query: 199 SMSGGWFFVVASEMI 213
             +  W  ++A+E++
Sbjct: 216 GWAFAWRTLIAAELV 230


>gi|148547436|ref|YP_001267538.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148511494|gb|ABQ78354.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 89  LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           LAA+  +RRL   L+P+LD+MQ++P   +L   ++ F     GKV      A+FA     
Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +       L  I   L + +     S WQ+   + +P ++P    GL  ++MM++S 
Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 228 ---MVVVASMI 235


>gi|260549620|ref|ZP_05823838.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624]
 gi|260407413|gb|EEX00888.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624]
          Length = 314

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|167041505|gb|ABZ06255.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_007I05]
          Length = 631

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 10/155 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV + + +  I  +P+GI++G          P  +L    P   + PLV++      
Sbjct: 440 SFLRVFLGLSLGIIFGVPLGIFMGLNRFAKGFFDPLVELYRPVPPLAWAPLVITVFGI-- 497

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N+    L+       ++ +  AGAS         A S   + W+  R +I P   P 
Sbjct: 498 --DNVGKVFLLFMVALSIMIISARAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPE 555

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +TG   A G  W   + +E  +       TTG+G
Sbjct: 556 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIG 584


>gi|188583124|ref|YP_001926569.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346622|gb|ACB82034.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 357

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y   P + + ++
Sbjct: 175 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 233

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F  Q  ++ N             E A +      R  R +I+P + P          G
Sbjct: 234 GTFFQQVLVIANTTRRVDPL---LVEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 290

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  +I +      F  V   +L++    +A +
Sbjct: 291 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 339


>gi|145632604|ref|ZP_01788338.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 3655]
 gi|145634647|ref|ZP_01790356.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittAA]
 gi|145636376|ref|ZP_01792045.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittHH]
 gi|144986799|gb|EDJ93351.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 3655]
 gi|145268192|gb|EDK08187.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittAA]
 gi|145270541|gb|EDK10475.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittHH]
          Length = 245

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 22/179 (12%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R++  VL+PIL I Q+IP+       V++F      K++ + L   F +        T +
Sbjct: 83  RQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV--------TAA 134

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  L N P+   +++++F +S  +    + +P ++P     + +++S      VA    
Sbjct: 135 CYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS------VAPIGA 188

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWS 267
           VVG+ V    G+G Y+ +    +  + +++A L +L  I     F  D LL R   +WS
Sbjct: 189 VVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHR--FIWS 244


>gi|154245174|ref|YP_001416132.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159259|gb|ABS66475.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 270

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           V++G A   + +  +  T     Y++W   + ++ R+   + I++ I + VG+ +G  P 
Sbjct: 49  VSLGDAIIKVAFTADARTGD---YLLWTDTLASLERLFSALAISTAIALLVGVLVGMLPI 105

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           + S + PF  +++  P     P++   +    L     ++L+ I G   Y++ ++     
Sbjct: 106 VRSFLAPFVAMVSMVPPLALLPILFIVMG---LGEASKIALITI-GITPYLIRDLAMRVE 161

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             P +    A +   + W+    ++LP I P  + G   + G A+   I +E
Sbjct: 162 ELPREQMIKAQTLGASTWQMALRVVLPQILPRLMDGLRLSLGPAFLFLIAAE 213


>gi|237712826|ref|ZP_04543307.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408817|ref|ZP_06085362.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22]
 gi|294648189|ref|ZP_06725729.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CC 2a]
 gi|294810767|ref|ZP_06769415.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229447154|gb|EEO52945.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353028|gb|EEZ02123.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22]
 gi|292636464|gb|EFF54942.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CC 2a]
 gi|294442100|gb|EFG10919.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 398

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L PI++++  IP  + GF    V+      L+   V  + LA    +    +  +     
Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A  M+  
Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331

Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              VI      PL  I + IA  + E       Y  L +LGV+  +  L+    + + + 
Sbjct: 332 NAAVIPITILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391

Query: 270 FRLERT 275
             L+R+
Sbjct: 392 KGLKRS 397


>gi|55233214|gb|AAV48566.1| OpuAB [Halobacillus trueperi]
          Length = 281

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A +IS++    +    AKS+    +L P+LD MQ++P   +L   V +F     G V G 
Sbjct: 103 ASLISVIIGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFF---SIGMVPGV 159

Query: 135 ELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189
             + IFA   T +  N+       +  +  +L E S +F  +G QK + + +P +    M
Sbjct: 160 FASVIFATPPTVRFTNL------GIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIM 213

Query: 190 PGLVWNMMMSMSGGWFFVVASEMI---VVGDTVI 220
            G+   +M+++S     VV + MI    +G TVI
Sbjct: 214 AGINQTVMLALS----MVVIASMIGAKGLGQTVI 243


>gi|255320678|ref|ZP_05361855.1| taurine transport system permease protein TauC [Acinetobacter
           radioresistens SK82]
 gi|262380690|ref|ZP_06073843.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
 gi|255302294|gb|EET81534.1| taurine transport system permease protein TauC [Acinetobacter
           radioresistens SK82]
 gi|262297638|gb|EEY85554.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
          Length = 268

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+L   PA    PLV+    ++ ++ +  L L+ I G  + I  N   G  +      E+
Sbjct: 112 QMLRNIPALALIPLVIL---WFGIDESAKLFLVAI-GVFFPIYINTYHGIRSVDPQLIEM 167

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ +   + ++ IILPG  P  + G   A G  W   IV+E  S        +G+G  
Sbjct: 168 GKSYGLNRRQLYQQIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQSGIGYM 221

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578
              + E      V++G+L+         +LA  L R+L  WHP Y
Sbjct: 222 TMNAREFLQTDIVLVGILLYALLGKLADILAQGLERYLLRWHPGY 266


>gi|20808057|ref|NP_623228.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|254478769|ref|ZP_05092137.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium
           pacificum DSM 12653]
 gi|20516637|gb|AAM24832.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|214035281|gb|EEB75987.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium
           pacificum DSM 12653]
          Length = 297

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 93  SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           S+++G  +L P ++I   IP  + G+L  +V V F++ + G +  + LA I  +    + 
Sbjct: 106 SKKMGQKILQPAIEIFVGIPSVVYGWLGLSVLVPFISKHFGGLGFSLLAGILVLAIMTLP 165

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     ++ ++P ++ E S +   + WQ   ++ +P + PG++  +++ ++  +   +
Sbjct: 166 TITSVSADTIRSLPVEIREASYALGATRWQTIRHVLIPAAKPGILTAIILGLARAFGEAL 225

Query: 209 ASEMIVVGDTVIP 221
           A +M++    VIP
Sbjct: 226 AVQMVIGNRPVIP 238


>gi|241767947|ref|ZP_04765492.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241360877|gb|EER57705.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 203

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+        +  L+L  + +F   + I  N   G         E+
Sbjct: 47  QMVRNIPALALIPLVILWFGIDE-SAKLFLIAVSVF---FPIYLNTFHGIRGVDPGLIEM 102

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++ +T W+ +R IILPG     + G   + G  W   IV+E  S        +G+G  
Sbjct: 103 GRTYGLTRWQLYRQIILPGALSSILVGLRFSLGLMWVILIVAETIS------AQSGIGYL 156

Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRF--LWHPLY 578
              + E      V++G+L+          F  AL R+   WHP Y
Sbjct: 157 TMNAREFLQTDIVLVGILLYALLGKLADVFAKALERYWLRWHPGY 201


>gi|227499962|ref|ZP_03930055.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Anaerococcus tetradius ATCC 35098]
 gi|227218071|gb|EEI83344.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Anaerococcus tetradius ATCC 35098]
          Length = 248

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 12/191 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I++ R+V+ ++I+ +  + +GI IG++  +   + P    L   P  VF P++V    
Sbjct: 52  ALISLMRIVLSLLISLLFALAIGIPIGYKEEVYQLLYPLVSSLYPIPKVVFLPVLVLFFG 111

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             +L+  + +S ++ F     +L  +I      P D      S   +       +ILP I
Sbjct: 112 LGNLSKIVLISSIIFFQ----LLLVIIDSVRNLPRDLYISMYSLSQSFKDILINLILPYI 167

Query: 503 FPYYVTGAITACGGAWNASIVSEV-ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P  +T      G A +    SE  AS+        GLG +I ++  +  + ++  G+++
Sbjct: 168 IPDILTALRICIGTAISVLFFSETFASF-------DGLGYFILDTMGRREYEQMYGGIIV 220

Query: 562 MCCFVLALNRF 572
           M    L L + 
Sbjct: 221 MSLLGLILYKL 231


>gi|222149534|ref|YP_002550491.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221736516|gb|ACM37479.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 288

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 12/137 (8%)

Query: 58  VHSLP----QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +HSLP     +       +L+  V      F+ A L  +S  L   L+PI + + ++P++
Sbjct: 77  IHSLPILWADFQQTFLKSVLTGYVAGCGLGFIVAVLIDRSPFLKQGLLPIGNFVSALPVV 136

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G     V++F   +P KV    +   F +  + V  ++     +  N+ RDL    R++ 
Sbjct: 137 GVAPIMVMWFGFDWPSKVAVVVIMTFFPMLVNTVQGLS-----AASNMERDL---MRTYA 188

Query: 174 LSGWQKFWYLGVPFSMP 190
            S WQ    L +P + P
Sbjct: 189 ASWWQTLIKLRLPAAWP 205


>gi|254440557|ref|ZP_05054051.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198256003|gb|EDY80317.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 251

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I ++     A L A SRR   +L P+L + Q++PI        ++     P K++   L 
Sbjct: 70  IGVILGIETALLLALSRRARWLLRPMLVVAQAVPIFALAPVITLWLGYGMPSKIVTIALV 129

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F I +        +++  L  +P  L ++S       W++   L +P+++P L+  + 
Sbjct: 130 TYFPIAS--------ALFDRLMALPAGLSDLSHLSGAGRWRETLLLRLPYAVPSLLSGLR 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++      V     +++G+ V    G+G ++ L    +   A+++A L +L  + L   
Sbjct: 182 LAV------VYGPLAVLIGEWVGSSQGLG-HLMLMSNGRGQTALMFAALIVLACLSLILW 234

Query: 258 LLFRPMIVWSNK 269
           L    +  W+  
Sbjct: 235 LAVEALSRWATT 246


>gi|89068478|ref|ZP_01155875.1| ABC-type sugar transport systems, permease component [Oceanicola
           granulosus HTCC2516]
 gi|89045897|gb|EAR51957.1| ABC-type sugar transport systems, permease component [Oceanicola
           granulosus HTCC2516]
          Length = 303

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 138 AIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A++++    VW      T      + +IP D  E +R    +  Q+FW + +P S P  V
Sbjct: 167 ALYSVIIVDVWKGVGIATVIFIAGIASIPSDYYEAARIDGATKAQQFWRITLPLSRPATV 226

Query: 194 WNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             + +S+ GG   F +   M   G      PG  S +  +I  +   +  Y + T   V+
Sbjct: 227 TVITLSLIGGLRTFDLIWTMTGGG------PGFSSDVVASIIYKQYQSGFYGLSTAGNVV 280

Query: 253 -FLYDQLLFRPMIVWSNKFRLE 273
            FL   L+  P+  W N+  ++
Sbjct: 281 LFLLIALVMVPLTTWMNRREID 302


>gi|227529931|ref|ZP_03959980.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350116|gb|EEJ40407.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 299

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 5/126 (3%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L P+++++  IP  + G+L  TV+      ++ G   G  LAA   +F   +  MT  + 
Sbjct: 117 LQPLIELLVGIPSVVYGYLGLTVIVPNLRQVFGGTGFGI-LAATSVLFLMILPTMTSMII 175

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            SL  +P+   + S     + WQ    + +P +  G++  M+  M+  +   +A +M++ 
Sbjct: 176 DSLQAVPQKYRQASAGLGATRWQTISRVIIPSAKSGILTAMVFGMARTFGEALAVQMVIG 235

Query: 216 GDTVIP 221
             T++P
Sbjct: 236 NTTIVP 241


>gi|239625292|ref|ZP_04668323.1| ABC sugar transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239519522|gb|EEQ59388.1| ABC sugar transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 291

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLS 175
           V Y +NL    V+G+   A+  +  S VW     M   +   L  +P DL+E +     +
Sbjct: 136 VNYLLNLGDYSVLGSPGTAMAGVVISAVWKQMPLMMIMLLSGLQTVPEDLKEAAEIDGAT 195

Query: 176 GWQKFWYLGVPFSMP 190
           G QKF  + VP  MP
Sbjct: 196 GLQKFLCITVPCIMP 210


>gi|194292722|ref|YP_002008629.1| alkanesulfonate transport protein, ABC superfamily, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|193226626|emb|CAQ72577.1| putative alkanesulfonate transport protein, ABC superfamily, inner
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 265

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L+   I      V+ T    SR    ++ P    ++ I +  ++    V+F      K
Sbjct: 72  RDLAGFAIGASAGLVFGTALGLSRLFERLVGPSFHTVKQISLFAWIPLISVWFGLGDAAK 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+   LAA F +          + ++ +  +P DL EV+R  R +  Q  W + +P + P
Sbjct: 132 VVFLSLAAFFPV--------VLNTFEGIRAVPVDLLEVARVLRFNRTQVLWRVVLPSAAP 183

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215
            +   + +++   W   + +E ++V
Sbjct: 184 SIFAGIHLALIYAWLATLGAEYLLV 208


>gi|126667736|ref|ZP_01738704.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
 gi|126627839|gb|EAZ98468.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA SR L   L P+LD+MQ+IP   +L  T+  F + + PG +       IFAI  +   
Sbjct: 118 AAHSRWLYKFLQPVLDLMQTIPPFVYLIPTLTLFGLGVVPGVIS----TVIFAI--AAPV 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMS 201
            +T   +  +  +P++L E  ++F  +  Q  + + +P +M     G+   +M+S+S
Sbjct: 172 RLT---HLGISQVPKELVEAGKAFGCTNRQLLFKVELPAAMSSIGAGITQCIMLSLS 225


>gi|39937222|ref|NP_949498.1| putative taurine ABC transport system permease [Rhodopseudomonas
           palustris CGA009]
 gi|192293002|ref|YP_001993607.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Rhodopseudomonas palustris TIE-1]
 gi|39651080|emb|CAE29603.1| putative taurine ABC transport system permease protein
           [Rhodopseudomonas palustris CGA009]
 gi|192286751|gb|ACF03132.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 277

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 8/112 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L ++  T+++F           + A+ F +F   V+ +  + Y ++  +
Sbjct: 118 PVIEALRPIPPLAWIPITILWFGL--------GDAASYFLVFLGAVFPVFIATYTAIRGL 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            R+    +       WQ F  + +P S+P ++  + +++  GW  VV +E+I
Sbjct: 170 DRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLRIALGVGWMCVVTAELI 221


>gi|21623838|dbj|BAC00974.1| ABC-type transporter membrane permease component [Pseudomonas
           putida]
          Length = 265

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ R  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264


>gi|322507919|gb|ADX03373.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323517513|gb|ADX91894.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
          Length = 293

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 111 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 167

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 168 VI-GTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 226

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 227 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 267


>gi|221209331|ref|ZP_03582312.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD1]
 gi|221170019|gb|EEE02485.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD1]
          Length = 263

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 91  AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTS 145
           A +R  G   +P    I+DI Q+ P +  L   V      L P  +I   L  +  +F S
Sbjct: 94  AVTRPFGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLIALVLYGLLPVFES 152

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +          L ++PRD+ E +R   +SGWQ+   + +P + P +V  + +++
Sbjct: 153 TI--------AGLEDVPRDVVEAARGMGMSGWQRLMSVELPLAFPVIVNGIRLAV 199


>gi|189423688|ref|YP_001950865.1| binding-protein-dependent transporters inner membrane component
           [Geobacter lovleyi SZ]
 gi|189419947|gb|ACD94345.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter lovleyi SZ]
          Length = 641

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            +L N+PR+L   S +   S WQ  W + +P ++PG+   +M+    G+   V   MIV+
Sbjct: 513 DALSNVPRNLSAASLALGASRWQTAWRVVLPSALPGVFSAIMI----GFGRAVGETMIVL 568

Query: 216 ---GDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
              G+T I        L  + + IA+ I E  L   LY  L +  V+ 
Sbjct: 569 MATGNTPIMSWSLFNGLRSLSANIAVEIPEAPLNGTLYRTLFLSAVLL 616


>gi|86136259|ref|ZP_01054838.1| hypothetical taurine ABC transporter, permease protein [Roseobacter
           sp. MED193]
 gi|85827133|gb|EAQ47329.1| hypothetical taurine ABC transporter, permease protein [Roseobacter
           sp. MED193]
          Length = 273

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP+   +  IP +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 116 LVPLTAALFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+  G  
Sbjct: 167 DNVDRSLIRMGQSFNLSWMSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 224

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251
                GIG+YI  A    DL  +     +L++LGV
Sbjct: 225 Y----GIGAYILEAGSLYDLERLFAGVTILSLLGV 255


>gi|94310540|ref|YP_583750.1| substrate-binding region of ABC-type glycine betaine transport
           system [Cupriavidus metallidurans CH34]
 gi|93354392|gb|ABF08481.1| ABC-type transporter: periplasmic glycine betaine/choline-binding
           lipoprotein and permease components transmembrane
           [Cupriavidus metallidurans CH34]
          Length = 516

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF--MNLYPGKVIGAELAAIFAIFTSQ 146
           +AA+ RR G VL+ ++ ++Q+IP L  L   +     + ++P         A+ A+F   
Sbjct: 342 VAARRRRFGQVLLALVGMLQTIPSLALLAMLIPALGRIGIWP---------ALVALFLYA 392

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  +  +    L  +P  + + + +  +   Q  WY+ +P S+P
Sbjct: 393 LLPIVRNACTGLQEVPAGMRDAALALGMRPLQVLWYVELPLSLP 436


>gi|253577313|ref|ZP_04854631.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843317|gb|EES71347.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 300

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L P+++++  IP  + GF+  +++  ++ +++PG+ +G  LA    +    +  +T    
Sbjct: 118 LQPVIELLAGIPSVVYGFVGLSIIVPFYRDIFPGQGLGI-LAGATVLSIMILPTITSIAT 176

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            +L  +P  L+E S +   + WQ      +P ++P L+  +++ M+  +   +A +M++ 
Sbjct: 177 DALSALPPGLKEGSYALGATRWQTLSRTVLPTTLPSLLTGVVLGMARAFGEALAVQMVIG 236

Query: 216 GDTVIP 221
               IP
Sbjct: 237 NAPHIP 242



 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 19/156 (12%)

Query: 395 IIASIIWIPVGI-----WIGFRPHISSK-IQPFAQLLAAFPANV--FFPLVVSCVSYYHL 446
           I+A++I  P+GI      +   P    K +QP  +LLA  P+ V  F  L +    Y  +
Sbjct: 89  ILAALIAAPLGICAALFMVEIMPKFGKKYLQPVIELLAGIPSVVYGFVGLSIIVPFYRDI 148

Query: 447 NPNLWLSLL--------MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
            P   L +L        MI  T   I  + +   SA P   KE + +   T W+     +
Sbjct: 149 FPGQGLGILAGATVLSIMILPTITSIATDAL---SALPPGLKEGSYALGATRWQTLSRTV 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           LP   P  +TG +     A+  ++  ++      H+
Sbjct: 206 LPTTLPSLLTGVVLGMARAFGEALAVQMVIGNAPHI 241


>gi|197295123|ref|YP_002153664.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944602|emb|CAR57206.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 324

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  +            E A +      +   ++++PG+ P          
Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI++      F  V   +L++    L  +
Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305


>gi|162449593|ref|YP_001611960.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161160175|emb|CAN91480.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 286

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 8/127 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+   + P+   +  +P L +L   ++          IG  L  I  I  + +  +  
Sbjct: 119 SRRIEEHVHPLFKALAQVPALAWLPLVMMVAG-------IGESLKLIL-IAQASLIPVAI 170

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + ++ + N+PR   EV+R FR S  Q    + +P ++P +   +   ++  W  +V  E+
Sbjct: 171 NTFEGIKNVPRSYIEVARVFRFSHAQLLRKVVLPAAVPSIAVGIRYGLTQAWLSLVTVEL 230

Query: 213 IVVGDTV 219
           +   + V
Sbjct: 231 LASSEGV 237


>gi|254249943|ref|ZP_04943263.1| ABC-type proline/glycine betaine transport systems, permease
           component [Burkholderia cenocepacia PC184]
 gi|124876444|gb|EAY66434.1| ABC-type proline/glycine betaine transport systems, permease
           component [Burkholderia cenocepacia PC184]
          Length = 293

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 100 TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 159

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 160 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 210

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 211 SVELPLAFPVIVNGIRLAV 229


>gi|125623880|ref|YP_001032363.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|6119854|gb|AAF04259.1|AF139575_2 glycine-betaine binding permease protein [Lactococcus lactis]
 gi|7212814|gb|AAF40474.1|AF184955_2 OpuABC [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492688|emb|CAL97642.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300070654|gb|ADJ60054.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 573

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 120 AKSELVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +  +L E + SF  +  QK + L  P +    M G+   +M+++S    
Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252


>gi|313498505|gb|ADR59871.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 89  LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           LAA+  +RRL   L+P+LD+MQ++P   +L   ++ F     GKV      A+FA     
Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +       L  I   L + +     S WQ+   + +P ++P    GL  ++MM++S 
Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 228 ---MVVVASMI 235


>gi|290958242|ref|YP_003489424.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22]
 gi|260647768|emb|CBG70873.1| putative binding-protein-dependent transport system [Streptomyces
           scabiei 87.22]
          Length = 324

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+  +++ +       L A+SR    +L P+L++++ IP +  +   ++ F +     
Sbjct: 85  RILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFPS----- 139

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E   +F  FT+  + +  S   ++  +    EE  R+      +    + +P ++P
Sbjct: 140 ---NEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPGALP 196

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
           G+   + + +   W  V+++EMI
Sbjct: 197 GIFGGLSVGIGVSWICVISAEMI 219


>gi|260555524|ref|ZP_05827745.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260412066|gb|EEX05363.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 314

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|271968809|ref|YP_003343005.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270511984|gb|ACZ90262.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 248

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A+++ +  G  IG    ++  ++P+   L + P     PL++    ++ +     L+ 
Sbjct: 64  VLAAVLGVLTGFLIGRHHLLAVALEPYLVALYSVPLIALVPLMII---WFGIGQGFLLAT 120

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + +  T   ++F    G       + E+A ++ +TG R    ++LPG  PY   G   + 
Sbjct: 121 I-VLSTGIMLVFPAATGTRESVRAYGELARAYRVTGHRLLLKVVLPGALPYIAAGLRISV 179

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             A  A +V +    GH      GLG  ++++  +    EV
Sbjct: 180 QRALMAVVVGQFLV-GH-----PGLGTLLSDARARLDADEV 214


>gi|159186087|ref|NP_356394.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159141221|gb|AAK89179.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 258

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   V+  II + + +  G+W+G  P ++  + PF + + A P  V  P+ V      
Sbjct: 60  ITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFV-----L 114

Query: 445 HLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVASSFHITGWR---WWRYIILP 500
            L   LW  + +     +++  FN + G          V S+  I G +     R++  P
Sbjct: 115 WLGLGLWSKVALAVTLVFFVTFFNAMQGVREVN---PVVLSNTRILGAKRSDLLRHVYFP 171

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               + ++   T+ G A   +I+ E          + GLG  IA S        V  G++
Sbjct: 172 AAASWILSSLRTSVGFAVVGAIIGEYLG------ASAGLGYLIARSEGNFDAVGVFAGII 225

Query: 561 IMCCFVLALNRFL 573
           I+  FVL ++  L
Sbjct: 226 ILAVFVLIIDLIL 238


>gi|71737350|ref|YP_277000.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557903|gb|AAZ37114.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 291

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S G+++    Y D      LG  ++ R+ + +  A +  IP+GI IG          P  
Sbjct: 77  SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V        +  L L  L IF     I      G           
Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPIKVRA 191

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T W+  R+++LP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 192 AQSLGATLWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +  + +      VVLG+L++     A+ 
Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273


>gi|26990271|ref|NP_745696.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24985221|gb|AAN69160.1|AE016550_2 amino acid transporter permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 299

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 89  LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           LAA+  +RRL   L+P+LD+MQ++P   +L   ++ F     GKV      A+FA     
Sbjct: 137 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 185

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202
           +  +       L  I   L + +     S WQ+   + +P ++P    GL  ++MM++S 
Sbjct: 186 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 244

Query: 203 GWFFVVASEMI 213
               VV + MI
Sbjct: 245 ---MVVVASMI 252


>gi|303249561|ref|ZP_07335768.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|302651635|gb|EFL81784.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 215

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 73  PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 132

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 133 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 186

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 187 SIALTVLMALMLY--VYYRANKLLNKKVELE 215


>gi|257095736|ref|YP_003169377.1| molybdate ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048260|gb|ACV37448.1| molybdate ABC transporter, inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 220

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 12/98 (12%)

Query: 144 TSQVWNMTFS---MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            S ++N+ F+   M ++   IPR++ E +    LS WQ F  + +P + PG+   + ++ 
Sbjct: 93  ASLIFNLPFAVQPMQRAFAAIPREVREAAWVSGLSRWQTFLRVELPLAWPGIAAALALTF 152

Query: 201 SG--GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +   G F VV    ++VG +   LPG    IA+AI +Q
Sbjct: 153 AHTLGEFGVV----LMVGGS---LPGETRTIAIAIYDQ 183


>gi|116512254|ref|YP_809470.1| ABC-type proline/glycine betaine transport system, permease
           component [Lactococcus lactis subsp. cremoris SK11]
 gi|116107908|gb|ABJ73048.1| ABC-type proline/glycine betaine transport system, permease
           component [Lactococcus lactis subsp. cremoris SK11]
          Length = 573

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 120 AKSELVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +  +L E + SF  +  QK + L  P +    M G+   +M+++S    
Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252


>gi|327393231|dbj|BAK10653.1| inner membrane ABC transporter permease protein YehY [Pantoea
           ananatis AJ13355]
          Length = 393

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 26/226 (11%)

Query: 57  DVHSLPQYASRTT---------LRMLSAMVI-SLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D+  L +YA+R +         L +L+A V+ +LL  F    +  +       +  +L++
Sbjct: 166 DLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFPLGIVLYRRSGWQSSVFGVLNV 225

Query: 107 MQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSMYQSL 158
           +Q++P   + G L   +      +P  G   + G  +A A+ A+    +  +  S+   L
Sbjct: 226 VQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAPALIALVLYALLPLVRSVVTGL 285

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +P D+ E +R   LSG Q+F+ + VP ++P  VW     +SG    VV +  + V   
Sbjct: 286 QQVPPDVRESARGMGLSGRQQFFAVEVPLALP--VW-----LSGIRVVVVQTLGMAVVAA 338

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
           +I   G G+ I   +    L  +L  ++ ++ +    D  LFR +I
Sbjct: 339 LIGAGGFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA-LFRLLI 383


>gi|326796543|ref|YP_004314363.1| choline ABC transporter permease [Marinomonas mediterranea MMB-1]
 gi|326547307|gb|ADZ92527.1| choline ABC transporter, permease protein [Marinomonas mediterranea
           MMB-1]
          Length = 281

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T + ++SA  +S+L        AA    L  +L P+LD+MQ+IP   +L  T++ F + 
Sbjct: 95  QTLVLVVSATFVSVLIGVPIGIAAAHRPWLYTILRPVLDLMQTIPTFVYLIPTLILFGLG 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG +       IFAI  +    +T   Y  +  +P +L E   +F  +  +  + + +
Sbjct: 155 YVPGLI----STIIFAI--AAPIRLT---YLGVSKVPSELLEAGLAFGCTKSKLLYRVEL 205

Query: 186 PFSMP----GLVWNMMMSMS 201
           P +MP    G+   +M+S+S
Sbjct: 206 PAAMPSIMAGVTQCIMLSLS 225



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 36/205 (17%)

Query: 330 NFLQLCSNQRVSYMLDIF-W---FCVVCGVAIGIAW---QSIGYIVNHFTYQDVLYVI-- 380
           +F+ +     +  ++D+F W     ++  +A+G AW   +S+G +V  F    +L +I  
Sbjct: 31  DFIAITLETIIMALVDVFEWIPPLALIAMIAVG-AWFLHRSVGLVV--FIVAALLLIINL 87

Query: 381 --WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             WL  I T+  VV    ++ +I +P+GI    RP + + ++P   L+   P        
Sbjct: 88  GYWLETIQTLVLVVSATFVSVLIGVPIGIAAAHRPWLYTILRPVLDLMQTIP-------- 139

Query: 438 VSCVSYYHLNPNLWL-SLLMIFGTQWYILFNVIA-------GASAFPNDFKEVASSFHIT 489
               ++ +L P L L  L  + G    I+F + A       G S  P++  E   +F  T
Sbjct: 140 ----TFVYLIPTLILFGLGYVPGLISTIIFAIAAPIRLTYLGVSKVPSELLEAGLAFGCT 195

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
             +    + LP   P  + G +T C
Sbjct: 196 KSKLLYRVELPAAMPSIMAG-VTQC 219


>gi|227893560|ref|ZP_04011365.1| PTS family oligomeric beta-glucoside porter component IIC
           [Lactobacillus ultunensis DSM 16047]
 gi|227864658|gb|EEJ72079.1| PTS family oligomeric beta-glucoside porter component IIC
           [Lactobacillus ultunensis DSM 16047]
          Length = 264

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 19/123 (15%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  AMV+SLL T++Y  L  K+++L       + +  S+P     +FT      L P  +
Sbjct: 137 MFVAMVVSLLITYIYCKLE-KNKKL------TIKMPASVPPAVSTSFTA-----LIPAII 184

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS-----FRLSGWQKFWYLGVP 186
           IGA +  I  +FT   WN   +M  +L   P  LE + RS     F L   +  W+ G+ 
Sbjct: 185 IGAGVLVIRFLFTLTPWNDIHNMLYTLIQTP--LEHLGRSIWALLFLLFLSEVLWFFGIH 242

Query: 187 FSM 189
            SM
Sbjct: 243 GSM 245


>gi|237726314|ref|ZP_04556795.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434840|gb|EEO44917.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 395

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|170734924|ref|YP_001774038.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820962|gb|ACA95543.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 324

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  +            E A +      +   ++++PG+ P          
Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI++      F  V   +L++    L  +
Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305


>gi|32034639|ref|ZP_00134786.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208013|ref|YP_001053238.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae L20]
 gi|126096805|gb|ABN73633.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 249

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 20/204 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T + +++ + +  L   + A   + S+ L   L+P+L I Q+IP+     F +  
Sbjct: 52  QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + L+ G  + +++A    I    V   T + Y  L N P+   E++++  +        
Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAILLR 163

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P L   + +++S      V     VVG+ V    G+G Y+ L    +    +L
Sbjct: 164 VRLPAALPALASGLRIAVS------VVPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216

Query: 243 YAMLTMLGVI-----FLYDQLLFR 261
           +A LT+L ++     F+ D+LL R
Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240


>gi|15901253|ref|NP_345857.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae TIGR4]
 gi|15903299|ref|NP_358849.1| phosphate ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111658593|ref|ZP_01409250.1| hypothetical protein SpneT_02000268 [Streptococcus pneumoniae
           TIGR4]
 gi|116516273|ref|YP_816698.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae D39]
 gi|148985647|ref|ZP_01818801.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|148993042|ref|ZP_01822636.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|148997547|ref|ZP_01825152.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|149007331|ref|ZP_01830989.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|149011639|ref|ZP_01832835.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|149019354|ref|ZP_01834716.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|168483976|ref|ZP_02708928.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486093|ref|ZP_02710601.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1087-00]
 gi|168489563|ref|ZP_02713762.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae SP195]
 gi|168493302|ref|ZP_02717445.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575858|ref|ZP_02721773.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae MLV-016]
 gi|169833586|ref|YP_001694834.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684358|ref|YP_001836105.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae CGSP14]
 gi|194396785|ref|YP_002038047.1| phosphate ABC transporter permease [Streptococcus pneumoniae G54]
 gi|225854846|ref|YP_002736358.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae JJA]
 gi|225857034|ref|YP_002738545.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae P1031]
 gi|225859164|ref|YP_002740674.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 70585]
 gi|225860821|ref|YP_002742330.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237649325|ref|ZP_04523577.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CCRI 1974]
 gi|237820944|ref|ZP_04596789.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298229508|ref|ZP_06963189.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255459|ref|ZP_06979045.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502650|ref|YP_003724590.1| phosphate ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|303254554|ref|ZP_07340658.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS455]
 gi|303258994|ref|ZP_07344973.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|303261678|ref|ZP_07347625.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264347|ref|ZP_07350267.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS397]
 gi|303265854|ref|ZP_07351751.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS457]
 gi|303268187|ref|ZP_07353986.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS458]
 gi|307068053|ref|YP_003877019.1| phosphate ABC transporter permease [Streptococcus pneumoniae AP200]
 gi|307127032|ref|YP_003879063.1| phosphate ABC transporter permeae PstC [Streptococcus pneumoniae
           670-6B]
 gi|14972887|gb|AAK75497.1| putative phosphate ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458895|gb|AAL00060.1| ABC transporter membrane-spanning permease - phosphate transport
           [Streptococcus pneumoniae R6]
 gi|116076849|gb|ABJ54569.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae D39]
 gi|147756602|gb|EDK63643.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|147761135|gb|EDK68103.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|147764070|gb|EDK71002.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|147922128|gb|EDK73250.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928243|gb|EDK79260.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|147931224|gb|EDK82203.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|168996088|gb|ACA36700.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172042790|gb|EDT50836.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629692|gb|ACB90640.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae CGSP14]
 gi|183570723|gb|EDT91251.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1087-00]
 gi|183572000|gb|EDT92528.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae SP195]
 gi|183576625|gb|EDT97153.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578352|gb|EDT98880.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae MLV-016]
 gi|194356452|gb|ACF54900.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae G54]
 gi|225721673|gb|ACO17527.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 70585]
 gi|225723073|gb|ACO18926.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae JJA]
 gi|225724837|gb|ACO20689.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae P1031]
 gi|225727195|gb|ACO23046.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238245|gb|ADI69376.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301794440|emb|CBW36874.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
 gi|301800265|emb|CBW32885.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae OXC141]
 gi|301802140|emb|CBW34877.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302598522|gb|EFL65564.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS455]
 gi|302637258|gb|EFL67746.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|302639937|gb|EFL70393.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|302642266|gb|EFL72614.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS458]
 gi|302644589|gb|EFL74839.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS457]
 gi|302646159|gb|EFL76386.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS397]
 gi|306409590|gb|ADM85017.1| ABC-type phosphate transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306484094|gb|ADM90963.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 670-6B]
 gi|327389585|gb|EGE87930.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA04375]
 gi|332073706|gb|EGI84185.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA17570]
 gi|332074721|gb|EGI85195.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA17545]
 gi|332074980|gb|EGI85452.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA41301]
 gi|332200841|gb|EGJ14913.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA41317]
 gi|332201850|gb|EGJ15920.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA47368]
 gi|332203229|gb|EGJ17297.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA47901]
          Length = 305

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P + +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   VV  +  +++ G   G  L+ I  +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|168180040|ref|ZP_02614704.1| putative ABC transporter, permease protein [Clostridium botulinum
           NCTC 2916]
 gi|170757084|ref|YP_001781022.1| putative ABC transporter, permease protein [Clostridium botulinum
           B1 str. Okra]
 gi|226948648|ref|YP_002803739.1| putative ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|169122296|gb|ACA46132.1| putative ABC transporter, permease protein [Clostridium botulinum
           B1 str. Okra]
 gi|182668926|gb|EDT80902.1| putative ABC transporter, permease protein [Clostridium botulinum
           NCTC 2916]
 gi|226842358|gb|ACO85024.1| putative ABC transporter, permease protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 253

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 5/141 (3%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   ++P    + A P  V   ++++ V     +  ++ S+LM F     I  NV
Sbjct: 91  GINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKSSSVAIFTSILMCFPI---IYTNV 145

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           ++G  +      E+A+ + +        I LP   PY ++G +   G  W  S+ SEV S
Sbjct: 146 LSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLS 205

Query: 529 WGHIHLRTTGLGAYIAESTEK 549
                +    L A    +TE+
Sbjct: 206 TPKYSIGLNLLNAKATLATEE 226


>gi|76781920|gb|ABA54729.1| AbsT2 [Alcaligenes sp. O-1]
          Length = 244

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 19/202 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M RVV    IA ++ + +G+ +         I PF + L        FPL +       
Sbjct: 51  SMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPLAILWFGIGD 110

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    ++L   F     +L +  AG           ASS   + W   R +ILPG  P 
Sbjct: 111 ASKIFLIALSCCF----PVLLSTYAGVQGIDVALVRAASSLGASRWEIVRNVILPGSIPS 166

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G A    I SE+   G ++    G+G  + ++ +      +  G+ I+   
Sbjct: 167 ILTGVRISWGIALIVIIASEMV--GAVN----GIGFMVLDAQQTFRTERLFSGIAIIAAI 220

Query: 566 VLALNRFL---------WHPLY 578
               +R L         WH  Y
Sbjct: 221 GYGTDRALRWLRRSLVPWHQEY 242


>gi|146276640|ref|YP_001166799.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145554881|gb|ABP69494.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 238

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 20/161 (12%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A S RLG +L P+L I Q++P+     F +   + L+ G  +G+++A +  I     + +
Sbjct: 75  ALSDRLGQILRPLLVISQALPV-----FALAPILTLWLGYGMGSKVAVVVLI---TFFPV 126

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +++  L   P    +++R  R   W++  +L +P ++P L   + ++       V A 
Sbjct: 127 ASALHDGLRATPEAALDLARLARAPRWRELMWLRLPHALPHLAAALRIAA------VYAP 180

Query: 211 EMIVVGDTVIPLPGIGSYIALAIK--EQDL----LAILYAM 245
              V+G+ V    G+G  + LA    + DL    LA+L AM
Sbjct: 181 IGAVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAM 221


>gi|319957569|ref|YP_004168832.1| binding-protein-dependent transport systems inner membrane
           component [Nitratifractor salsuginis DSM 16511]
 gi|319419973|gb|ADV47083.1| binding-protein-dependent transport systems inner membrane
           component [Nitratifractor salsuginis DSM 16511]
          Length = 260

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV V   ++ +I   +G+  GF    S   +P   +L   P   +   +V  + +
Sbjct: 68  SLTIERVAVGFAVSLVIGTLLGLLAGFFVTASITSRPIITILMGMPPIAW---IVLAMIW 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + +  N+ +   +I  +   +    + G     + F E+A +F +     +  I LP IF
Sbjct: 125 FGMG-NMTVEFTVIVASLPIVFIGALQGTRTLEDKFDEMADTFKVPRMMKFTDIYLPHIF 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y     ++A G AW   +++E+ +       + G+GA +A +  +      +  V+IM 
Sbjct: 184 SYIFPAWVSALGMAWKIVVMAELLA------ASDGIGAALAMARSQLDTDTAMALVVIMI 237

Query: 564 CFVLALNRFLWHPL 577
             ++ +      P+
Sbjct: 238 GSLMIVEYIFLEPI 251


>gi|304394282|ref|ZP_07376205.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
 gi|303293722|gb|EFL88099.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
          Length = 277

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 17/156 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G   G++ A I F  FT  V     + Y ++
Sbjct: 120 LVPLVAAIFPIPKIALLPLFVIWF-----GIGEGSKYALIAFGTFTPTV----VATYGAV 170

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             + R L  + +SF L  W     + +P ++PG++  + +S++     +VA+EM+  G T
Sbjct: 171 DAVDRTLIRMGQSFGLPWWSIVRKIVLPGALPGILSGLRVSLAIAIILLVAAEML--GAT 228

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                GIG+YI  A    D L  L+A +T+L ++ L
Sbjct: 229 Y----GIGAYILEAGSLYD-LERLFAGVTILSLLGL 259


>gi|254563041|ref|YP_003070136.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254270319|emb|CAX26315.1| ABC transporter, permease [Methylobacterium extorquens DM4]
          Length = 353

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y   P + + ++
Sbjct: 171 ISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F  Q  ++ N             E A +      R  R +I+P + P          G
Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  +I +      F  V   +L++    +A +
Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335


>gi|229587818|ref|YP_002869937.1| taurine ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359684|emb|CAY46532.1| taurine ABC transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 278

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A +  +PVGI IG        + P  + 
Sbjct: 66  GWLLATSGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEF 124

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V       L+  L L  L IF     I      G           A 
Sbjct: 125 YRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQ 180

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   +  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 181 SLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 234

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + +      VVLG+L++     A+ 
Sbjct: 235 SAAQFLVTDVVVLGILVIALIAFAME 260


>gi|255693909|ref|ZP_05417584.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           finegoldii DSM 17565]
 gi|260620274|gb|EEX43145.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           finegoldii DSM 17565]
          Length = 398

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 10/186 (5%)

Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L P+++++  IP  + GF    V+      L+   V  + LA    +    +  +     
Sbjct: 212 LKPVIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N PR + E S +   S WQ  + + +P+S+ G+   +++ +       +A  M+  
Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331

Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              VI      PL  I + IA  + E       Y  L +LGV+  +  L+    + + + 
Sbjct: 332 NAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391

Query: 270 FRLERT 275
             L+R+
Sbjct: 392 KGLKRS 397


>gi|254466399|ref|ZP_05079810.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206687307|gb|EDZ47789.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 421

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +  +I+ IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   + W+  R++I+P   P 
Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEV 526
             TGA  A G  W   + +E+
Sbjct: 346 IFTGARVAMGVCWGTVVAAEL 366



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   +++F     GK++         +F + +W MT +    +  +
Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIWETGKIV--------LLFLAALWIMTIAARAGVSGV 315

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                  + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 316 NISKIHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|330502313|ref|YP_004379182.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328916599|gb|AEB57430.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 271

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 12/175 (6%)

Query: 47  DIVDIVPITLDVHSLP----QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           D +D +  T D  S      Q  + +  R+   + I+ L   V    A      G  L P
Sbjct: 53  DAIDRLAFTEDKRSGQYLFWQDTASSLQRLGLGLGIAALLGLVLGIAAGSVPLFGAPLSP 112

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L ++  IP L  L    + F           EL+ +  I       +   + Q    IP
Sbjct: 113 LLTVLSMIPPLAILPILFIVFGL--------GELSKVMLIVIGITPCIARDIEQRAREIP 164

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            +L   +++   + W     L +P  MP L+ ++ + +   W F++A+E I   D
Sbjct: 165 GELLIKAQTLGANSWTLILRLVLPQLMPRLLISLRLMLGSAWLFLIAAEAIASTD 219


>gi|170767687|ref|ZP_02902140.1| taurine uptake ABC transporter, permease protein [Escherichia
           albertii TW07627]
 gi|170123175|gb|EDS92106.1| taurine uptake ABC transporter, permease protein [Escherichia
           albertii TW07627]
          Length = 275

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 12/187 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +  A +I IPVGI +G  P     + P  +L    P   + PL+V       
Sbjct: 83  SLTRIALALFAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + L  L IF     +  + +AG  +        A S   +  +   ++ILPG  P 
Sbjct: 143 TT-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPE 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563
            +TG     G   +  + +E+ +       T GLG  +  + E  +   V+ G+ ++   
Sbjct: 199 ILTGLRIGLGVGGSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252

Query: 564 CFVLALN 570
            F+L L 
Sbjct: 253 AFLLELG 259


>gi|169796457|ref|YP_001714250.1| ABC transporter membrane protein [Acinetobacter baumannii AYE]
 gi|213156431|ref|YP_002318851.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AB0057]
 gi|215483920|ref|YP_002326145.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|301347140|ref|ZP_07227881.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB056]
 gi|301510144|ref|ZP_07235381.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB058]
 gi|301594671|ref|ZP_07239679.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB059]
 gi|332855005|ref|ZP_08435661.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332869477|ref|ZP_08438795.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|169149384|emb|CAM87268.1| putative transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213055591|gb|ACJ40493.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AB0057]
 gi|213986111|gb|ACJ56410.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|332727699|gb|EGJ59112.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332732707|gb|EGJ63929.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 314

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    +N    ++++
Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I GT +  +  +            E   +      +   ++++P   P          G
Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            AW   IVSE+         T+G+  +I +     +F  V   +LI+
Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288


>gi|293604869|ref|ZP_06687266.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292816697|gb|EFF75781.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 256

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+V  + A I+ IP+GI +G      +   P    L   P+  + PL    + ++ +  
Sbjct: 70  RVMVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPL---SLLWFGITE 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               S++ + G+    L  V+  +          A +     W+  R ++ PG  P  ++
Sbjct: 127 TQKYSIVFM-GSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLPQILS 185

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G     G +W   I +E+ +         GLG  I    E      VVLG++++   VL 
Sbjct: 186 GMKIILGLSWTCVISAELVA------SKEGLGFMIMNGKEFFQTDTVVLGMVLISFTVLV 239

Query: 569 LN 570
            +
Sbjct: 240 TD 241


>gi|260597339|ref|YP_003209910.1| alkanesulfonate transporter permease subunit [Cronobacter
           turicensis z3032]
 gi|260216516|emb|CBA29702.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Cronobacter turicensis z3032]
          Length = 263

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  + NI  
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDS 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++    ILYA+L  L    L  +LL R  + W   ++ +    
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLA--DLSARLLERVWLRWHPAYQTKEANA 263



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G     +   E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 130 LVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFAL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL----N 570
           G  W   IV+E  S        +G+G Y+A +  +    +VV+  +I+   +  L     
Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADLSA 242

Query: 571 RFL------WHPLY 578
           R L      WHP Y
Sbjct: 243 RLLERVWLRWHPAY 256


>gi|261367285|ref|ZP_05980168.1| putative ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282570888|gb|EFB76423.1| putative ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 253

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFP 476
           + P  QL+ A P   F  L +  VS  +L      S+++ F     +++  V+AG +   
Sbjct: 91  VDPVMQLIRAMPVASFVILALLWVSGSNL------SVIVSFTHVLPVVYAGVLAGIADTD 144

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               E+A  + +      RYI LPGIFP +    I A G  W + + +EV
Sbjct: 145 PQLLEMARVYRLPWMARLRYIWLPGIFPSFSESCIAAMGMCWKSGVSAEV 194


>gi|218548809|ref|YP_002382600.1| ABC transporter membrane protein [Escherichia fergusonii ATCC
           35469]
 gi|218356350|emb|CAQ88968.1| putative ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
          Length = 244

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+      N   PL V
Sbjct: 47  LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 103

Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             ++   L      +++ +F  +   I+ N  AG +A P   KE A    +T W+    +
Sbjct: 104 LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 163

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP  +P  ++G   A      A+I+   A    + +  +  G  I        FP ++L
Sbjct: 164 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 216

Query: 558 GVLIMCCFVLALNRFL 573
           G      F L L+  L
Sbjct: 217 GATATALFALILDSLL 232


>gi|312138999|ref|YP_004006335.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888338|emb|CBH47650.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 266

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 12/173 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ +G    +   ++    L+   P   + PL +  + Y   +     ++ +IF   
Sbjct: 90  IPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGYGDRS-----TIFLIFVAA 144

Query: 462 WY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           ++ IL N   G +  P    E A+       +    I++P       +G   A G +W  
Sbjct: 145 FFPILLNTTVGVAQVPPRLLEAAAMLGTPKAKTLYKIVIPSAMQSITSGLRIALGLSWVV 204

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +V E          +TGLGA I ++ +      ++ G++ +       +RF+
Sbjct: 205 LVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIGLAGFVTDRFM 251


>gi|302537611|ref|ZP_07289953.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302446506|gb|EFL18322.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 304

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 7/151 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +L VIW    ++ R ++  ++A  I  P+G+ +     + + I P  Q L + P+  + P
Sbjct: 98  LLEVIW---TSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQSLPSVAWVP 154

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                V ++ LN  +  +++++ G    I   +++G    P  F     +   TG R   
Sbjct: 155 ---PAVLWFGLNDAMMYTVILL-GAVPSIANGLVSGIDQIPPLFLRAGRTLGATGLRGAW 210

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +++LP   P YV G       +W + + +E+
Sbjct: 211 HVVLPAALPGYVAGLKQGWAFSWRSLMAAEI 241


>gi|265751858|ref|ZP_06087651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236650|gb|EEZ22120.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 395

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|262277475|ref|ZP_06055268.1| glycine betaine/L-proline transport system permease protein ProW
           [alpha proteobacterium HIMB114]
 gi|262224578|gb|EEY75037.1| glycine betaine/L-proline transport system permease protein ProW
           [alpha proteobacterium HIMB114]
          Length = 295

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 16/194 (8%)

Query: 66  SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + +TL ++S A ++ LL       + AKS ++ +V+ PILD MQ+IP   +L   +   M
Sbjct: 100 TMSTLAIISVATLLCLLIGAPIGIVMAKSNKVSVVMSPILDTMQTIPTFVYL---IPIIM 156

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L  GKV G     I+AI    +  +T      +  +   L E  ++  +S +   + + 
Sbjct: 157 LLGIGKVPGLIAVCIYAI--PPIVRLT---NLGIREVNAKLIEAGKALGISKFVILYRIE 211

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P +       M+G    ++ S  +VV  ++I + G+G  I  +I  Q L   L  
Sbjct: 212 FPLALPSI-------MTGVNQTIMMSLAMVVIASMIGVSGLGVPILRSISNQYLALGLMN 264

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  ++D++
Sbjct: 265 GLAIVALAIIFDRI 278


>gi|45358760|ref|NP_988317.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|45047626|emb|CAF30753.1| transport permease protein [Methanococcus maripaludis S2]
          Length = 253

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV++   IA    IP+G+ +G+   I+       +LL   P   + PL    ++++
Sbjct: 59  VSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPL---ALAWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  +  ++  G  + IL N I+G  + P    E A +   +     + +++P   P
Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 175 DILTGLRVGAGIAWMCVVAAEM 196


>gi|323161797|gb|EFZ47677.1| inner membrane ABC transporter permease protein yehY domain protein
           [Escherichia coli E128010]
          Length = 279

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 109 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 168

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 169 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 204


>gi|320160309|ref|YP_004173533.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319994162|dbj|BAJ62933.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +F M      IPRDL + +R    + WQ FW++ +P  +PGL W M
Sbjct: 160 SFWMRGFFSGIPRDLVDAARVDGCNDWQAFWHVMIPMVLPGL-WTM 204


>gi|285017487|ref|YP_003375198.1| binding-protein-dependent transport systems inner membrane
           component;substrate-binding region of ABC-type glycine
           betaine transport system [Xanthomonas albilineans GPE
           PC73]
 gi|283472705|emb|CBA15210.1| hypothetical binding-protein-dependent transport systems inner
           membrane component;substrate-binding region of abc-type
           glycine betaine transport system [Xanthomonas
           albilineans]
          Length = 496

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           RLG  L+ +  ++Q++P L    F +  F        IGA+  AI A+F   +  +  + 
Sbjct: 329 RLGQALLALTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 380

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           +  L  I R+L E + +  L    + W + +P +M
Sbjct: 381 HAGLTGIARELRETAAAIGLPASTRLWRIELPLAM 415


>gi|295698912|ref|YP_003606805.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295438125|gb|ADG17294.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 288

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+  +L P    +++IP L ++   +++       K+    L AI A F  Q      
Sbjct: 115 SRRVDALLDPAFQALRAIPSLAWVPILLLWMGIDEAPKIT---LIAIGAFFPVQ-----L 166

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S+   +  + R L E     RLS    F  + +P SMP +   +   +S  W F+VA+E+
Sbjct: 167 SVVAGIRGVDRKLIEFGELNRLSRRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAEL 226

Query: 213 IVV 215
           I  
Sbjct: 227 IAA 229


>gi|312109385|ref|YP_003987701.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|311214486|gb|ADP73090.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 258

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + + ++IP L  +   +++F        +G E A IF +     + +  + Y  + ++P+
Sbjct: 100 IQMFRNIPHLALIPIVILWFG-------VGEE-AKIFLVIIGVFFPIYINTYHGVISVPK 151

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           DL E+ + + LS W  F  +  P ++P ++  +  ++   W        ++V +TV    
Sbjct: 152 DLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVMWL------TLIVAETVAASS 205

Query: 224 GIGSYIALAIKE 235
           GIG Y+A+  +E
Sbjct: 206 GIG-YMAMNARE 216


>gi|114762783|ref|ZP_01442217.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Pelagibaca bermudensis HTCC2601]
 gi|114544693|gb|EAU47699.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 278

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   ++   L PILD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 118 AAHRPKVYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   Y  + + P+ L E + +F  +  Q  + + +P+++P    GL   +M+S+S
Sbjct: 172 RLT---YLGVSSTPKALLEAATAFGATPTQTLYKVELPYAVPQIMAGLNQTIMLSLS 225


>gi|84685715|ref|ZP_01013612.1| hypothetical protein 1099457000253_RB2654_07079 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666381|gb|EAQ12854.1| hypothetical protein RB2654_07079 [Rhodobacterales bacterium
           HTCC2654]
          Length = 276

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125
           +T   +L A+ I++   F     AA+ RRL  V+ PILD MQ++P   +L   V+ F + 
Sbjct: 89  QTIALVLVAVTIAVGIAFPLGIYAARHRRLEAVVRPILDAMQTVPPWVYLIPAVIIFSLG 148

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P         A+ A     V  M      +   +P DL+E+ ++         + + +
Sbjct: 149 TVP---------AVIATIVYGVPPMLRLTTLAFRGVPTDLKELGQAIGAKPRTILFKIEL 199

Query: 186 PFSMPGLV 193
           P + P LV
Sbjct: 200 PAATPTLV 207


>gi|163746321|ref|ZP_02153679.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex
           HEL-45]
 gi|161380206|gb|EDQ04617.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex
           HEL-45]
          Length = 421

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV   + +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +L+     W +     +G S         A S   +  +  R++I+P   P 
Sbjct: 290 VGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368


>gi|325292826|ref|YP_004278690.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060679|gb|ADY64370.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 258

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           I I  Q I ++ +   Y+ V        IT+   V+  +I + + +  G+W+G  P ++ 
Sbjct: 39  IDIVKQVITWVADAGFYKHV-------GITLSETVLGYLIGTGLGVGAGVWLGLSPFVAR 91

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAF 475
            + PF + + A P  V  P+ V       L   LW  + +     +++  FN + G    
Sbjct: 92  VLDPFIKAVNAIPRVVLAPIFV-----LWLGLGLWSKVALAVTLVFFVTFFNAMQGVREV 146

Query: 476 PNDFKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                 V S+  I G +     R++  P    + ++   T+ G A   +I+ E       
Sbjct: 147 N---PVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG---- 199

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + GLG  IA S        V  G++I+  FVL ++  L
Sbjct: 200 --SSAGLGYLIARSEGNFDAVGVFAGIIILAIFVLVIDLIL 238


>gi|306845830|ref|ZP_07478398.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306273722|gb|EFM55560.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 272

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 23/159 (14%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           G       GIGSYI  A    DL   L+A +T+L V+ L
Sbjct: 221 GAQY----GIGSYILEAGSLYDLEK-LFAGVTILSVMGL 254


>gi|126649773|ref|ZP_01722009.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905]
 gi|126593492|gb|EAZ87437.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905]
          Length = 309

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 14/183 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
           +T+   V+  I  +++   + I + + P +S  + P+  +L A P     P+++  +   
Sbjct: 74  VTLMETVIGFIAGTLLGTFIAILLWWSPFLSKVLDPYLVILNAMPKVALGPILIVALGPG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y+ +     L  ++I     Y  F  +      PN + +V  +F  + W+ +R +ILP  
Sbjct: 134 YFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGASRWQIFREVILPAS 187

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  ++      G +W   IV      G   + + GLG  I    +  +F  V++ +LI+
Sbjct: 188 FPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLII 241

Query: 563 CCF 565
             F
Sbjct: 242 AFF 244


>gi|237712167|ref|ZP_04542648.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453488|gb|EEO59209.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 395

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|256826772|ref|YP_003150731.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease
           [Cryptobacterium curtum DSM 15641]
 gi|256582915|gb|ACU94049.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Cryptobacterium curtum DSM 15641]
          Length = 394

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   LL   P   F  +++  V    L   ++LS L++      I  N++ G  +   
Sbjct: 228 VEPIVSLLRTIPVVTFIIMLLIWVGNQALT--IYLSFLIVLP---LIYTNMLTGFESVDA 282

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              E+A  + ++ WR + Y+  P   P+  +    + G +W + I++EV
Sbjct: 283 QMLEMARVYRLSRWRTFMYVYRPAFMPFLSSSCKISLGMSWKSGIMAEV 331



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 14/131 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ ++++IP++ F+   +++         +G +   I+  F   +  +  +M     ++
Sbjct: 230 PIVSLLRTIPVVTFIIMLLIW---------VGNQALTIYLSFLIVLPLIYTNMLTGFESV 280

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + E++R +RLS W+ F Y+  P  MP L  +  +S+   W   + +E++       P
Sbjct: 281 DAQMLEMARVYRLSRWRTFMYVYRPAFMPFLSSSCKISLGMSWKSGIMAEVLAT-----P 335

Query: 222 LPGIGSYIALA 232
            P IG  ++ A
Sbjct: 336 KPSIGKEMSQA 346


>gi|255283058|ref|ZP_05347613.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255266360|gb|EET59565.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 267

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 17/180 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +  PI + ++ IP L ++  ++++F     GK         F IF      +T 
Sbjct: 99  SRLAEAIFKPIFEFIRPIPPLAWIPLSILWFGLSDVGK--------FFIIFLGCFSFITV 150

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + Y    N+  +L   +R    +  Q F+ + +P ++P +   + ++++ GW  VV +EM
Sbjct: 151 NTYDGAKNVDPELIGAARMLGANERQIFFRIVLPSAVPYIFAGLQIAVTAGWSAVVGAEM 210

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           I   +      G+G  I   +   + + I+  ++ +  V F+   L   L R +  W+ +
Sbjct: 211 IQSNE------GVGWVIVRGMNTGNTVQIMVGIMAIGIVGFILANLTSALERRLCAWNEQ 264


>gi|288870382|ref|ZP_06113859.2| sn-glycerol-3-phosphate-binding protein [Clostridium hathewayi DSM
           13479]
 gi|288867442|gb|EFC99740.1| sn-glycerol-3-phosphate-binding protein [Clostridium hathewayi DSM
           13479]
          Length = 282

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 74  SAMVISLLF------TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           S+M++ LLF       F       K+   G+ ++ ++   Q I +  FL F+ +  +N Y
Sbjct: 87  SSMILQLLFVVPAAYAFARCKFRGKTILFGITMMTLMIPGQLIFMPLFLIFSRMGLINSY 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              ++    +A F IF          + QS   IP +L E +R  + S WQ   ++ VP 
Sbjct: 147 ASMILPFSTSA-FGIFM---------LRQSFMQIPEELLEAARLDQASEWQIIRHIMVPM 196

Query: 188 SMPGLVWNMMMSMSGGW 204
           + P +V  M+++    W
Sbjct: 197 ARPTIVTLMLLTFISRW 213


>gi|218681475|ref|ZP_03529362.1| putative sulfonate ABC transporter, permease protein
           (ssuC/ycbM-like) [Rhizobium etli CIAT 894]
          Length = 127

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           ++  + R + EV R FRLSG +    + +P  +P  V  +   +  GW FVVA+E
Sbjct: 13  AVVGVDRRIVEVGRVFRLSGLELIRLILLPAVLPDYVLALRAGLGLGWMFVVAAE 67


>gi|184152831|ref|YP_001841172.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
 gi|183224175|dbj|BAG24692.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
          Length = 216

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQP-------FAQLLAAFPANVFFPLVVSCVSY 443
           VV ++I+ II +P+G       +I S+I+P       FAQLL   P+     L++  +  
Sbjct: 28  VVTLVISMIIALPLG-------YIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGT 80

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   + L +L +      +L N I G +     +KEV  +  +   +  R I +P   
Sbjct: 81  GVVPALIALIVLAL----PPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLAL 136

Query: 504 PYYVTG-AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           PY + G  +       +A++ + + + G   L  TGLG Y       G+    +L +L M
Sbjct: 137 PYILNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAM 196

Query: 563 CCFVLALNRFLWH 575
             F   + +   H
Sbjct: 197 ISFDFLIRKVQKH 209


>gi|85706087|ref|ZP_01037182.1| taurine ABC transporter, permease protein [Roseovarius sp. 217]
 gi|85669251|gb|EAQ24117.1| taurine ABC transporter, permease protein [Roseovarius sp. 217]
          Length = 420

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 15/148 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV-----SC 440
           ++FRV+V   + +++ IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWQALAR 289

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +     P    +L+M    +        AG S         A S   + W+  R++I+P
Sbjct: 290 AARSSCCPRG--ALIMTISAR--------AGVSGVAISKVHAAYSLGASKWQLMRHVIVP 339

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVAS 528
              P   TGA  A G  W   + +E+ +
Sbjct: 340 NSLPEIFTGARVAMGVCWGTVVAAELVA 367


>gi|148653178|ref|YP_001280271.1| glycine betaine ABC transporter substrate-binding protein
           [Psychrobacter sp. PRwf-1]
 gi|148572262|gb|ABQ94321.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Psychrobacter sp. PRwf-1]
          Length = 652

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 27/173 (15%)

Query: 70  LRMLSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           ++ ++ +++S++ T V       L A S  L  V+ P+LD+MQ++P   +L   ++ F  
Sbjct: 450 VQTMALLIVSVIVTMVVGIPMGILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFG- 508

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 IG ++ A+FA     +  +       +  +P ++ E  RSF  +  Q   ++ +
Sbjct: 509 ------IG-KVPALFATIIYALPPLIRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKL 561

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           P ++P    G+   +MMS+S           +VV  ++I  PG+G  +  +I+
Sbjct: 562 PQALPSIMAGINQAVMMSLS-----------MVVLASMIGAPGLGEDVLQSIQ 603


>gi|50120464|ref|YP_049631.1| putative taurine transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610990|emb|CAG74435.1| putative taurine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 257

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 28/166 (16%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    IA I+ +P+G+ +G  P  ++   PF Q L   P     PL V     
Sbjct: 63  AVSVARALSAFSIAIILGVPLGLLMGLSPPTAAVFNPFVQFLRPLPKIALIPLAV----- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494
                 +WL +     ++++++F     +V+ GA A     +     VA +   +  + +
Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +++LP   P   T    A G  W + I +E+ +       T+G+G
Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209


>gi|324113370|gb|EGC07345.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 236

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+      N   PL V
Sbjct: 39  LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 95

Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             ++   L      +++ +F  +   I+ N  AG +A P   KE A    +T W+    +
Sbjct: 96  LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 155

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP  +P  ++G   A      A+I+   A    + +  +  G  I        FP ++L
Sbjct: 156 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 208

Query: 558 GVLIMCCFVLALNRFL 573
           G      F L L+  L
Sbjct: 209 GATATALFALILDSLL 224


>gi|291287979|ref|YP_003504795.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885139|gb|ADD68839.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 245

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 24/189 (12%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT  RV+  +++ S+    +GI+ G  P I   I+P  ++L   P  V   L +      
Sbjct: 57  ITAVRVISALVLGSVTGFILGIFAGKYPLIMQFIEPMRRVLTTIPGIVAAVLAM------ 110

Query: 445 HLNPNLWLSL---LMIFGTQWYIL----FNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LWL L   ++IF    +I+     NV    +   N + E+A  + ++     + I
Sbjct: 111 -----LWLGLGSAMVIFLNSMFIIPVVYINVAESINKCDNTYIEMADVYQLSTLSRIKNI 165

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P +        +   G +   ++++EV   G       GLG  +  S  +   P +  
Sbjct: 166 YIPIVSSALSAALVLVTGNSMRMTVLAEVLGTGE------GLGFVLGISRARLDMPSLYG 219

Query: 558 GVLIMCCFV 566
            VLI   FV
Sbjct: 220 CVLISFAFV 228


>gi|163857621|ref|YP_001631919.1| putative binding-protein-dependent transport protein [Bordetella
           petrii DSM 12804]
 gi|163261349|emb|CAP43651.1| putative binding-protein-dependent transport protein [Bordetella
           petrii]
          Length = 285

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 23/191 (12%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M+ A  +S++       L A++  L  +++P+LD+MQ++P   +L   V+ F     GK+
Sbjct: 100 MIMAAGLSVIIGIPVGVLMARANWLRSIMLPLLDVMQTMPSFVYLIPVVMLF---GLGKI 156

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
                 AI A     V  +       +  + R++ E SR+F  S  Q+ + + +P ++P 
Sbjct: 157 -----PAIIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGASPRQQLFGVQLPLALPN 211

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
              G+    MM++S     V+AS        +I   G+G  + L I   ++   L A L 
Sbjct: 212 IMAGINQTTMMALS---MVVIAS--------MIGARGLGYEVLLGINRLEVGRGLLAGLG 260

Query: 248 MLGVIFLYDQL 258
           ++ +  L+D++
Sbjct: 261 IVVLAVLFDRI 271


>gi|186472444|ref|YP_001859786.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184194776|gb|ACC72740.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 292

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++ +   F+  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGVALAFLLTSLAV-STRIGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  + +W +  +MY     +P  L    R++ L+G      + VP ++P
Sbjct: 157 LL-------FVLVHAVLWPLALNMYAGFRAVPATLRMAGRNYGLTGLHHVVLILVPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232


>gi|89095405|ref|ZP_01168319.1| putative permease [Oceanospirillum sp. MED92]
 gi|89080343|gb|EAR59601.1| putative permease [Oceanospirillum sp. MED92]
          Length = 299

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 25/173 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R    + P+LD+MQ++P   +L   V   M L  GK+ G     I+AI    ++ N
Sbjct: 129 ARSDRAQAFVTPVLDVMQTMPAFVYLIPVV---MLLGIGKIPGVIAVIIYAIPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +      + +D+ E + ++  S +Q+   + +P +MP    G+   +MMS+S    
Sbjct: 186 LGIRL------VDKDVMEAATAYGASPFQRLTGVQLPLAMPTIMAGINQTIMMSLS---- 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 M+V+  ++I + G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRV 281


>gi|300310979|ref|YP_003775071.1| alkanesulfonates ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073764|gb|ADJ63163.1| ABC-type alkanesulfonates transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 279

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + +  N   G  +      E+
Sbjct: 124 QMVRNIPALALIPLVIL---WFGIDETAKLFLVSV-GVFFPVYLNTFHGIRSVDQGLIEM 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S+ ++GW  +R +ILPG  P  + G   A G  W   IV+E  S         G+G  
Sbjct: 180 AKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 233

Query: 543 IAESTEKGSFPEVVLGVLIMCCF-VLA------LNRF--LWHPLY 578
              + E      V++G+L+      LA      L RF   WHP Y
Sbjct: 234 TMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGY 278


>gi|258545018|ref|ZP_05705252.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519744|gb|EEV88603.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 264

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 16/156 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+P++  +  +P +  L   +V+F     G   G+++A I       ++    + Y ++ 
Sbjct: 107 LLPLVSALFPVPKIALLPLFLVWF-----GIDEGSKVATIL---IGTLFPTVIATYAAVD 158

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N+ R+L  + +SF L        + +P +MPG+     +S+S      +A  M+VV + +
Sbjct: 159 NVDRNLIRMGQSFGLPPAAIVRKIILPGAMPGIFAGFRISIS------IAITMLVVAEMM 212

Query: 220 IPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253
               G+G+YIA A +  + D L     +L +LG++ 
Sbjct: 213 NADRGVGAYIAAAGQLYQMDQLLAGVTLLALLGIVL 248


>gi|329960796|ref|ZP_08299102.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           fluxus YIT 12057]
 gi|328532397|gb|EGF59198.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           fluxus YIT 12057]
          Length = 394

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 12/197 (6%)

Query: 75  AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128
           A++I+L F    A   ++  + ++  ++ P+++++  IP  + GF    V+  +    + 
Sbjct: 185 AILIALPFGLAVAIYMSEVANPKIRNLMKPVIELLSGIPSVVYGFFGLIVIVPFIQKAFD 244

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V  + LA    +    +  +      ++ N PR + E S +   S WQ  + + +P+S
Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYS 304

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242
           + G+   +++ +       +A  M+     VI      PL  I + IA  + E       
Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPH 364

Query: 243 YAMLTMLGVIFLYDQLL 259
           Y  L +LGV+  +  LL
Sbjct: 365 YEALFLLGVVLFFISLL 381


>gi|291484944|dbj|BAI86019.1| phosphate ABC transporter, permease [Bacillus subtilis subsp. natto
           BEST195]
          Length = 309

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|256829627|ref|YP_003158355.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
 gi|256578803|gb|ACU89939.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
          Length = 283

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           M   +Y +L  + R   E +R    S W+ FW + VP +MPG+V   M+
Sbjct: 165 MILPLYAALERLDRRYLEAARDLGASPWRAFWKVVVPLTMPGIVSGCML 213


>gi|239624587|ref|ZP_04667618.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520973|gb|EEQ60839.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 273

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160
           PI ++++ IP + ++   ++         V+G   LA  F IF +    +  + Y  +  
Sbjct: 116 PIFELIRPIPAIAWIPLIIL---------VLGIGNLAKSFIIFFAAFVPIVINSYTGIRQ 166

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +     SR+   S W  F  +GVP S+P +     +S+   W  +VA+EM+
Sbjct: 167 VNKTYVNFSRTCGASNWTIFLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEML 219


>gi|221310422|ref|ZP_03592269.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314745|ref|ZP_03596550.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319668|ref|ZP_03600962.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323945|ref|ZP_03605239.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767565|ref|NP_390377.2| phosphate ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|251757386|sp|P46339|YQGH_BACSU RecName: Full=Probable ABC transporter permease protein yqgH
 gi|225185193|emb|CAB14428.2| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 309

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|212691391|ref|ZP_03299519.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855]
 gi|212666001|gb|EEB26573.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855]
          Length = 395

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|158424268|ref|YP_001525560.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331157|dbj|BAF88642.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 291

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 6/161 (3%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S  ++    +L+  PA    PL    + ++ L  N  L  +++    W +  N  +G  A
Sbjct: 123 SDFLETVTAMLSPLPAIALLPL---ALIWFGLG-NGSLVFILVHSVLWPVALNTHSGFRA 178

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                + V  ++ + G+ + R I++P  FP  +TG       AW   + +E+     +  
Sbjct: 179 VSQTLRMVGRNYGLKGFAYIRKILIPAAFPSILTGLKIGWAFAWRTLVAAELVF--GVSS 236

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              GLG +I E+      P V  G+L +    L +   ++ 
Sbjct: 237 GQGGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENVIFR 277


>gi|159037257|ref|YP_001536510.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157916092|gb|ABV97519.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 663

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 15/176 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q +  T    L A+ +SLLF      LA  S R   ++ P+LD+MQ++P   +L    + 
Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGLSDRFHRLITPVLDLMQTMPTFVYLAPLTLV 208

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+       IG   A I  +  +    +  + +  + ++P    E + SF  +  Q+   
Sbjct: 209 FL-------IGPASATIATLIYAMPPAIRITAH-GIRSVPAPPVEATDSFGATRRQRLTK 260

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +P S   +V  +  +       ++A+  +V    +I  PG+G  +  A++  D+
Sbjct: 261 ALLPLSKRTIVLGVNQT-------IMAALAMVTVAALIDAPGLGKTVIKALQTTDV 309


>gi|70733713|ref|YP_257353.1| aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348012|gb|AAY95618.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 531

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +L P L  ++ I I  ++     +F      K +   LAA F +F         
Sbjct: 365 SRFSERLLGPTLAAIRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLF--------I 416

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  +S+  +   L E ++  RL+ WQ+   L +P + PG+   + +S+   W   + +E 
Sbjct: 417 ATQRSVAQLSPQLAEAAQVLRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEY 476

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            +  +      GIGS +   I  Q LL +   M  ML
Sbjct: 477 FMPSNG-----GIGSQM---ISAQQLLRMDLIMAGML 505


>gi|313765505|gb|EFS36869.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA1]
 gi|313815094|gb|EFS52808.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA1]
 gi|314917130|gb|EFS80961.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA1]
 gi|314921405|gb|EFS85236.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA3]
 gi|314954904|gb|EFS99310.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA1]
 gi|314958837|gb|EFT02939.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA1]
 gi|315099895|gb|EFT71871.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA2]
 gi|315101794|gb|EFT73770.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA1]
 gi|327454672|gb|EGF01327.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA3]
 gi|327456746|gb|EGF03401.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA2]
 gi|328755728|gb|EGF69344.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA1]
 gi|328756507|gb|EGF70123.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA2]
          Length = 296

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227


>gi|222080847|ref|YP_002540210.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221725526|gb|ACM28615.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 285

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 20/167 (11%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158
           LVP++  +  IP +  L   V++F     G    ++ A I F  FT  V     + Y ++
Sbjct: 128 LVPLVAALFPIPKIALLPLFVIWF-----GIDETSKYALIAFGTFTPTV----VATYGAV 178

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  G  
Sbjct: 179 DNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML--GAQ 236

Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGVI--FLYDQLLFR 261
                G+G+YI  A    DL  +    A+L+M+G+I  F+  Q+  R
Sbjct: 237 F----GVGAYILEAGSLYDLEKLFTGVAILSMMGLIVNFVIGQIERR 279


>gi|190893121|ref|YP_001979663.1| nitrate/sulfonate ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190698400|gb|ACE92485.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
          Length = 375

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I  L  F+ A LA +   L   L+PI +++ ++PI+G     V++F   +P K     +
Sbjct: 189 IIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKAAVVII 248

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              F +  + V  +  S      ++ RDL    R++  S WQ    L +P +MP
Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294


>gi|50841883|ref|YP_055110.1| putative transport system permease protein [Propionibacterium acnes
           KPA171202]
 gi|50839485|gb|AAT82152.1| putative transport system permease protein [Propionibacterium acnes
           KPA171202]
          Length = 293

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 172 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 224


>gi|332716874|ref|YP_004444340.1| aliphatic sulfonate ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325063559|gb|ADY67249.1| aliphatic sulfonate ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 259

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+    ++ ++    L  L+  G  + I  N + G         E+
Sbjct: 102 QMIRNIPHLALIPLVIL---WFGIDEEAKL-FLVALGVFFPIYINTLLGIQGVDPQLVEM 157

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++ ++ +  +R +ILPG  P   TG   A G  W   IV+E  S       ++GLG  
Sbjct: 158 GRTYGMSSFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYM 211

Query: 543 IAESTEKGSFPEVVLGVLI---MCCFVLALNRFL------WHPLY 578
             ++ E      VVL +LI   +     +  RFL      WHP +
Sbjct: 212 AMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAF 256


>gi|313905553|ref|ZP_07838916.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313469616|gb|EFR64955.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 251

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/184 (19%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +R+++  I+  +  +PVG+ +G +  +         LL   P  VF P++V  +    
Sbjct: 56  SFYRIILGTILGLLFSVPVGLLLGTKKKVDHVAGQLFNLLYPIPKVVFLPVIVVVMGIGD 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P ++L  L++F   + +   +   A   P+   +   S   +  ++ R++++PG  P 
Sbjct: 116 L-PKIFLIALVLF---FQLTIVIRDSAKKLPDTLYDSMKSLDASELQFLRHLVIPGCMPD 171

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +T   ++ G +     ++E  +       T+G+G +I +S +   +  +  GV+ +   
Sbjct: 172 ILTSVRSSIGISTAMLFITENFA------ATSGIGYFITKSMDARDYERMYAGVIALGVL 225

Query: 566 VLAL 569
            ++L
Sbjct: 226 GVSL 229


>gi|290963193|ref|YP_003494375.1| hypothetical protein SCAB_89171 [Streptomyces scabiei 87.22]
 gi|260652719|emb|CBG75852.1| putative binding protein dependent transport protein [Streptomyces
           scabiei 87.22]
          Length = 304

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 29/50 (58%)

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           MY +L NIPRD+ E +       WQ  W++ +P     +V+ ++++ +GG
Sbjct: 186 MYGALNNIPRDVMEAAHIDGAGAWQTAWHVQIPMLRKWIVYMVILAFAGG 235


>gi|903304|dbj|BAA09582.1| ORF72 [Bacillus subtilis]
 gi|1303855|dbj|BAA12511.1| YqgH [Bacillus subtilis]
          Length = 309

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|321311982|ref|YP_004204269.1| phosphate ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018256|gb|ADV93242.1| phosphate ABC transporter permease [Bacillus subtilis BSn5]
          Length = 309

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|229490049|ref|ZP_04383902.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
 gi|229323150|gb|EEN88918.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
          Length = 267

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131
           L    +SL+  ++ A +   S  L   LVP+  + Q++PI+      +++F   L P KV
Sbjct: 77  LVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KV 135

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +   LA  F         MT  + +      R+   + RS   + WQ+F Y+ +P ++P
Sbjct: 136 LVIALATFFP--------MTIGLIEGFAAADREAGALLRSMGSTRWQEFRYVRLPSAIP 186


>gi|226307497|ref|YP_002767457.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226186614|dbj|BAH34718.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 259

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131
           L    +SL+  ++ A +   S  L   LVP+  + Q++PI+      +++F   L P KV
Sbjct: 69  LVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KV 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +   LA  F         MT  + +      R+   + RS   + WQ+F Y+ +P ++P
Sbjct: 128 LVIALATFFP--------MTIGLIEGFAAADREAGALLRSMGSTRWQEFRYVRLPSAIP 178


>gi|114768906|ref|ZP_01446532.1| Glycine betaine/L-proline transport system permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549823|gb|EAU52704.1| Glycine betaine/L-proline transport system permease protein [alpha
           proteobacterium HTCC2255]
          Length = 512

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G++   R    S IQP    +   PA VF   ++  ++++       +   MIF
Sbjct: 344 VIGIPLGMFCARRRRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 400

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           G    +   V+ G    P+  +E A SF    W     + LP   P    G
Sbjct: 401 GGTPVVRLTVL-GLRGVPDSVREAAISFGANKWYLLTKVDLPLASPSIRAG 450


>gi|73538712|ref|YP_299079.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72122049|gb|AAZ64235.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 296

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R +  +L P+ D ++ +P + F+   +V+      G   GA++A IF       + M   
Sbjct: 130 RTVQALLEPLTDFIRYMPAVAFIPLVMVWV-----GIDEGAKVAIIF---IGTFFQMVLM 181

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + + +  +P    E +++   +  +   ++ VP + P L+  + ++M   W ++V +E++
Sbjct: 182 VAEDVRRVPMAQVEAAQTMGATRGEIIQHVIVPSAKPALLDTLRVTMGWAWTYLVVAELV 241

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI--LYAMLTMLGVIFLY-DQLLFR 261
             G       G+G  I   +K Q  L    ++A + ++GVI L  DQ + R
Sbjct: 242 AAGS------GLGFAI---LKAQRFLQTDKIFAGILLIGVIGLAIDQFMRR 283


>gi|23009762|ref|ZP_00050690.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 126

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I+ N   G    P D++ VA+   +    ++  I+LP   PY  TG     G +W A 
Sbjct: 7   WPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLAI 66

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +E+   G       G+G +I ++       E+++ ++ +      L+R +
Sbjct: 67  VAAEMLIGG------VGIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRLV 112


>gi|300022986|ref|YP_003755597.1| binding-protein-dependent transporters inner membrane component
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524807|gb|ADJ23276.1| binding-protein-dependent transport systems inner membrane
           component [Hyphomicrobium denitrificans ATCC 51888]
          Length = 269

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/129 (20%), Positives = 62/129 (48%), Gaps = 6/129 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ++AAI A+  +++ N+  +M +   ++ +DL E++  ++   W+   ++ +P   P    
Sbjct: 138 DVAAIVAVALNKIPNVAVNMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAA 197

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                +S  W  V+  E     +      G+G  +A+A +E D+  IL   L  + ++ +
Sbjct: 198 AARSGLSLVWKIVLVVEAFGRSN------GVGYRLAIAFQEFDVGTILAYALAFILIVQI 251

Query: 255 YDQLLFRPM 263
            +  + +P+
Sbjct: 252 IEFTILQPL 260



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N+  GA +   D  E+A+ +    W+  R++ LP + P++   A +     W   IV  V
Sbjct: 156 NMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAAAARSGLSLVWK--IVLVV 213

Query: 527 ASWGHIHLRTTGLGAYIA 544
            ++G    R+ G+G  +A
Sbjct: 214 EAFG----RSNGVGYRLA 227


>gi|161520059|ref|YP_001583486.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353760|ref|YP_001949387.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344109|gb|ABX17194.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337782|dbj|BAG46851.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 263

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 91  AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTS 145
           A +R  G   +P    I+DI Q+ P +  L   V      L P  +I   L  +  +F S
Sbjct: 94  AVTRPFGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLIALVLYGLLPVFES 152

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +          L ++PRD+ E +R   +SGWQ+   + +P + P +V  + +++
Sbjct: 153 TIAG--------LEDVPRDVIEAARGMGMSGWQRLMSVELPLAFPVIVNGIRLAV 199


>gi|327191933|gb|EGE58917.1| putative nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CNPAF512]
          Length = 375

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I  L  F+ A LA +   L   L+PI +++ ++PI+G     V++F   +P K     +
Sbjct: 189 IIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKAAVVII 248

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              F +  + V  +  S      ++ RDL    R++  S WQ    L +P +MP
Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294


>gi|126725657|ref|ZP_01741499.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126704861|gb|EBA03952.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 342

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +KS RL   +VPILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 174 SKSDRLQRSVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 232

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      + +D+ E + +F ++  Q+   + +P ++P    G+   +MMS++     
Sbjct: 233 GIRL------VDKDVIEAANAFGMTSRQRLTGVELPLALPNIMAGINQTIMMSLA----- 281

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 282 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 307


>gi|152986181|ref|YP_001351473.1| choline ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961339|gb|ABR83364.1| choline ABC transporter, permease protein [Pseudomonas aeruginosa
           PA7]
          Length = 279

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L P+LD+MQ++P   +L  T+  F + + PG +       IFA+  +    +T    Q  
Sbjct: 127 LRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVIFAV--AAPIRLTCLGIQ-- 178

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214
            ++P +L +  ++F  S WQ    + +P +MP    G+   +M+S+S          M+V
Sbjct: 179 -DVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS----------MVV 227

Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238
           +   ++   G+G  +  A+   D+
Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250


>gi|148257245|ref|YP_001241830.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409418|gb|ABQ37924.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 255

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++AS+  I +G  IG    +   + P  +LL   P +   P+ ++    + LN ++ L  
Sbjct: 72  LLASVAGIALGAMIGSSKAMRIYVAPTLELLRPLPVSAIIPVAIAA---FGLNQSMAL-F 127

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           ++ FG+ W +L   I G +A      EVA   H++       I LP   P  + G
Sbjct: 128 VIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPDILAG 182



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 23/165 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150
            S+ + + + P L++++ +P+   +   +  F +N         +  A+F I    +W M
Sbjct: 87  SSKAMRIYVAPTLELLRPLPVSAIIPVAIAAFGLN---------QSMALFVIAFGSLWPM 137

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                     +   L EV+R   +S     + + +P + P ++  M +S++      V  
Sbjct: 138 LLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVC 197

Query: 211 EMIVVGDTVIPLPGIGSYI---ALAIKEQDLLAILYAMLTMLGVI 252
           EM+        L G+G ++   A A +  D    L+A + +LG+I
Sbjct: 198 EMLA------GLDGLGQWVLLSARAFRSAD----LFAGVMLLGII 232


>gi|307260742|ref|ZP_07542431.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306869581|gb|EFN01369.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
          Length = 288

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|223934499|ref|ZP_03626420.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
 gi|223896962|gb|EEF63402.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
          Length = 348

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)

Query: 389 RVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           R +VL  +++S++ +P+GI  G     +   +PF +     PA  F  L V+ +      
Sbjct: 129 RTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCVAVLGIDD-P 187

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           P + + ++  F  Q  I+ N +           E A +   +GW+  R II+P       
Sbjct: 188 PKVAIIVIGTFFQQVLIIANTVRKVDP---ALLEAAQTLGASGWKLVRRIIIPAAITDIY 244

Query: 508 TGAITACGGAWNASIVSEV 526
           T      G AW   IV+EV
Sbjct: 245 TDMRILLGWAWTYLIVAEV 263


>gi|297583598|ref|YP_003699378.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297142055|gb|ADH98812.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 255

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 8/110 (7%)

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +QS+P + +L   +V F         G E A  F +     W MT +M   + N+   L 
Sbjct: 98  LQSVPSIVWLPLALVMFQ--------GGEGAIYFVVILGGTWAMTMNMRMGIKNVSPILI 149

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             +++   S  +  W + +P S+P ++    ++ + GW  ++A+E+I  G
Sbjct: 150 RAAKTMGYSQTEIVWKVMLPASVPSILTGARLAWAFGWRALMAAELIGRG 199


>gi|149181502|ref|ZP_01859997.1| ABC-type sugar transport system, permease component [Bacillus sp.
           SG-1]
 gi|148850752|gb|EDL64907.1| ABC-type sugar transport system, permease component [Bacillus sp.
           SG-1]
          Length = 293

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMY----QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           +G +  AIF+I   QVW  T  M       L NIP DL EV++    S WQ+F ++  P 
Sbjct: 150 LGDQDIAIFSIAVVQVWMHTGQMLIIFVAGLQNIPNDLYEVAKIEGASRWQRFRFVTWPL 209

Query: 188 SMPG 191
             P 
Sbjct: 210 VAPA 213


>gi|320184840|gb|EFW59630.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           flexneri CDC 796-83]
          Length = 333

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 163 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 222

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 223 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 258


>gi|229587775|ref|YP_002869894.1| putative ABC sulfur transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359641|emb|CAY46484.1| putative ABC sulfur transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 530

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR   VL P L  ++ I I  ++     +F      K +   LAA F +F         
Sbjct: 364 SRRSERVLGPTLSALRQIAIFAWVPLLTAWFGLGELAKWVFIALAAFFPLF--------I 415

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  +S+ N+   L E ++  RL+ +Q+   L +P +  G+   + +S+   W   + +E 
Sbjct: 416 ATQRSVLNLSPQLNEAAQVLRLNLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEY 475

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            +  +      GIGS   L I  Q LL +   M  ML
Sbjct: 476 FMPSNG-----GIGS---LMIGAQQLLRMDLIMSGML 504


>gi|313117408|ref|YP_004044391.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
 gi|312294299|gb|ADQ68730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 281

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 23/219 (10%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           TT P  +    P+T     LP+  +R   T+L ++  ++           +   + R   
Sbjct: 67  TTAPLSL----PVTGGTVELPRAMTRLAQTSLHLVPGLLAGAFVGNGAGLVIGYATRADA 122

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +  P++ +++ IP L ++ F +V+F   + G        A F +    +W   ++ Y  +
Sbjct: 123 IATPVVRVLRPIPELAWIAFAIVWFGIGHTG--------ATFIVAIGALWINYYAAYSGV 174

Query: 159 CNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
             +    +EV+ S  + +      Y+ +P + P +V     S+           MIVVG 
Sbjct: 175 RGVRDGYKEVAASLGIRTHVGMLRYVILPAASPAIVNGFRTSIG-------RCLMIVVGA 227

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +   PG+G  I  A    D+   +  ML +  V    D
Sbjct: 228 ELFGAPGVGYEILNASNNLDMARSMAYMLLISAVYICVD 266


>gi|171316825|ref|ZP_02906035.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097995|gb|EDT42812.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 255

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGMLVAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|165975737|ref|YP_001651330.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165875838|gb|ABY68886.1| spermidine/putrescine transport system permease protein
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 288

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNVIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|157692992|ref|YP_001487454.1| phosphate ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|194017756|ref|ZP_03056366.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus
           ATCC 7061]
 gi|157681750|gb|ABV62894.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
 gi|194010656|gb|EDW20228.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus
           ATCC 7061]
          Length = 294

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           P D KE + +  +T W   + +++PG  P  +TGAI A G
Sbjct: 160 PKDQKEASLALGVTKWHTVKTVLIPGALPSIITGAILASG 199


>gi|152988829|ref|YP_001345661.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963987|gb|ABR86012.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 538

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    ++ + I  ++     +F    P K+    LAA F +          +  + + ++
Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLAFVALAAFFPLL--------LATQRGIASL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL  W++   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLALPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSDG--- 489

Query: 222 LPGIGSYI 229
             GIGS +
Sbjct: 490 --GIGSLM 495


>gi|150006420|ref|YP_001301164.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|294777060|ref|ZP_06742518.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           vulgatus PC510]
 gi|149934844|gb|ABR41542.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|294449118|gb|EFG17660.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           vulgatus PC510]
          Length = 395

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSVSGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|307245096|ref|ZP_07527189.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307254051|ref|ZP_07535898.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307258507|ref|ZP_07540244.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306853985|gb|EFM86197.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306862976|gb|EFM94923.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306867411|gb|EFM99262.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 288

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|289424749|ref|ZP_06426532.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289155446|gb|EFD04128.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|313814415|gb|EFS52129.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA1]
 gi|313828616|gb|EFS66330.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA2]
 gi|315106454|gb|EFT78430.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA1]
 gi|315110248|gb|EFT82224.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA2]
 gi|327334982|gb|EGE76693.1| ABC transporter, permease protein [Propionibacterium acnes
           HL097PA1]
          Length = 296

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227


>gi|315647776|ref|ZP_07900877.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315276422|gb|EFU39765.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 286

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+GF       + P  Q+L   P     PL +    +   +      LL+  G+ + + 
Sbjct: 109 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 164

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G  +  N   +VA     + W   R +I+P   P    G   + G AW   +V+E
Sbjct: 165 VNTFLGIRSVDNRLFDVARVLQFSRWDLIRRLIVPASLPNIFLGIRLSIGVAWLGLVVAE 224

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         ++G+G YI       S+  VV   +I+   V  L+  L
Sbjct: 225 LMG------SSSGIG-YIINDARSFSWTTVVFVGIIVFALVGKLSDSL 265


>gi|314915854|gb|EFS79685.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA4]
          Length = 296

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227


>gi|295400979|ref|ZP_06810954.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976981|gb|EFG52584.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 258

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + + ++IP L  +   +++F        +G E A IF +     + +  + Y  + ++P+
Sbjct: 100 IQMFRNIPHLSLIPIVILWFG-------VGEE-AKIFLVIIGVFFPIYINTYHGVISVPK 151

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           DL E+ + + LS W  F  +  P ++P ++  +  ++   W        ++V +TV    
Sbjct: 152 DLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVMWL------TLIVAETVAASS 205

Query: 224 GIGSYIALAIKE 235
           GIG Y+A+  +E
Sbjct: 206 GIG-YMAMNARE 216


>gi|254820641|ref|ZP_05225642.1| putative ABC transporter transmembrane subunit [Mycobacterium
           intracellulare ATCC 13950]
          Length = 263

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 7/186 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM R +    +A +I   VG  I     + +   P    L   PA  +FP     + ++
Sbjct: 63  ITMCRALAGFALALLIGSVVGAVIAQNRLLRTAFGPVITGLQTMPAIAWFPF---AIIFF 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+ +  L  +++ G    +   V+AGA   P     VA +  + G+  +R++ILP   P
Sbjct: 120 GLHTSAIL-FVVVIGAAPSVATGVLAGAGQIPPLQLRVAKNLGLHGFGLYRHVILPASLP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +V G       AW + +  E+     +   T  +G  +  S      P  +  ++++  
Sbjct: 179 MFVAGLRQGWAFAWRSLMAGELVV---LISDTASIGVLLENSQNLSDMPSAIAIMIVILL 235

Query: 565 FVLALN 570
             +A++
Sbjct: 236 IGIAID 241


>gi|269839255|ref|YP_003323947.1| binding-protein-dependent transporters inner membrane component
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269790985|gb|ACZ43125.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 259

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 23/185 (12%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  L  +L   L ++++IP L  +   +++F     GK+       +F ++ +       
Sbjct: 90  SSTLSRLLDSTLQMIRNIPHLALIPLVILWFGIGEQGKLFLVAEGVLFPVYVNT------ 143

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             Y  + N+   L E+ + + LS W+ F  + +P ++P ++  +  ++   W        
Sbjct: 144 --YHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALGVMWL------T 195

Query: 213 IVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           ++V +T+    GIG YI +  +E    D+L    +LYA L  L       +LL R M+ W
Sbjct: 196 LIVAETIAASSGIG-YITMQAREFMQTDVLVMGILLYAALGKLADTV--ARLLERQMLRW 252

Query: 267 SNKFR 271
              ++
Sbjct: 253 HPAYQ 257



 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 33/186 (17%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQ 461
           G    +S  +    Q++   P     PLV+           LW  +       L+  G  
Sbjct: 88  GLSSTLSRLLDSTLQMIRNIPHLALIPLVI-----------LWFGIGEQGKLFLVAEGVL 136

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N   G     +   E+   + ++ W  +R I+LPG  P  + G   A G  W   
Sbjct: 137 FPVYVNTYHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALGVMWLTL 196

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---------VLALNRF 572
           IV+E  +       ++G+G    ++ E      +V+G+L+             +L     
Sbjct: 197 IVAETIA------ASSGIGYITMQAREFMQTDVLVMGILLYAALGKLADTVARLLERQML 250

Query: 573 LWHPLY 578
            WHP Y
Sbjct: 251 RWHPAY 256


>gi|326794337|ref|YP_004312157.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545101|gb|ADZ90321.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 299

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 21/197 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +    +         L A+S R   ++ P+LDIMQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTFLSIAIGVPIGILMARSNRAQSIITPLLDIMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GK+ G     I+AI    ++ N+   +      +P +  E + ++  +  Q+ +
Sbjct: 159 -MLLGIGKIPGLIAVIIYAIPPVIRLTNLGIRL------VPHETLEAATAYGATPTQRLF 211

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q     
Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLG 264

Query: 242 LYAMLTMLGVIFLYDQL 258
           L   L ++ +  ++D++
Sbjct: 265 LLNGLAIVALAIMFDRV 281


>gi|238855420|ref|ZP_04645730.1| maltose ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|260665273|ref|ZP_05866122.1| maltose ABC transporter permease [Lactobacillus jensenii SJ-7A-US]
 gi|282933073|ref|ZP_06338463.1| maltose ABC transporter, permease protein [Lactobacillus jensenii
           208-1]
 gi|313472711|ref|ZP_07813199.1| sugar ABC transporter, permease protein [Lactobacillus jensenii
           1153]
 gi|238831910|gb|EEQ24237.1| maltose ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|239529321|gb|EEQ68322.1| sugar ABC transporter, permease protein [Lactobacillus jensenii
           1153]
 gi|260561010|gb|EEX26985.1| maltose ABC transporter permease [Lactobacillus jensenii SJ-7A-US]
 gi|281302831|gb|EFA95043.1| maltose ABC transporter, permease protein [Lactobacillus jensenii
           208-1]
          Length = 285

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            IPR ++E +     + WQ FW +G+P S P +V+  + +  G W   + S +I+
Sbjct: 165 TIPRAIDEAAEIDGATKWQVFWNIGLPLSKPMIVYTALTAFIGPWVDFIFSGIIL 219


>gi|111021912|ref|YP_704884.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110821442|gb|ABG96726.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 291

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ R ++   +A +I IP+GI I  +RP +S  + P  +L     A    P+ +  +   
Sbjct: 102 SLSRALIGFFVAVVIAIPLGIAIAWYRP-VSDFLNPILELFRNTAALALLPVFILILGIG 160

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+I+   + IL N I+G         + ASS  ++  R ++ ++LP   P
Sbjct: 161 EESKIA----LVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVP 216

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    I +E+           GLG  I  S      P +  G++ +  
Sbjct: 217 TIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISV 270

Query: 565 FVLALNRFL 573
             L LN  L
Sbjct: 271 LGLTLNAVL 279


>gi|15600570|ref|NP_254064.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104479|ref|ZP_01368397.1| hypothetical protein PaerPA_01005556 [Pseudomonas aeruginosa PACS2]
 gi|116053524|ref|YP_793851.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894480|ref|YP_002443350.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237937|ref|ZP_04931260.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719]
 gi|254242929|ref|ZP_04936251.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192]
 gi|296392237|ref|ZP_06881712.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas aeruginosa PAb1]
 gi|313111693|ref|ZP_07797487.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa 39016]
 gi|9951700|gb|AAG08762.1|AE004950_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588745|gb|ABJ14760.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169868|gb|EAZ55379.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719]
 gi|126196307|gb|EAZ60370.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192]
 gi|218774709|emb|CAW30526.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310883989|gb|EFQ42583.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa 39016]
          Length = 279

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L P+LD+MQ++P   +L  T+  F + + PG +       IFA+  +    +T    Q  
Sbjct: 127 LRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVIFAV--AAPIRLTCLGIQ-- 178

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214
            ++P +L +  ++F  S WQ    + +P +MP    G+   +M+S+S          M+V
Sbjct: 179 -DVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS----------MVV 227

Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238
           +   ++   G+G  +  A+   D+
Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250


>gi|167854721|ref|ZP_02477500.1| ABC transporter, permease protein [Haemophilus parasuis 29755]
 gi|167854135|gb|EDS25370.1| ABC transporter, permease protein [Haemophilus parasuis 29755]
          Length = 245

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R++V + +A +  IP+G+ +G    +     P  Q L       + P+VV  +       
Sbjct: 64  RIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEV----G 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +L +  L+ F   W ++ +  +G  +    +  ++ S   +      +II+P I  + +T
Sbjct: 120 DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILT 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G   + G AW   +  E+           GLG +I ++ ++ ++ E++  V+++
Sbjct: 180 GLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIVI 227


>gi|116255813|ref|YP_771646.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260461|emb|CAK03565.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 264

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 12/200 (6%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLI--IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++  + +  W+G I     V LI   ++ +I IP+ + +   P +S  + P   ++ + P
Sbjct: 55  SFSSIGFERWMGHIAATLRVALIGYAMSIVIAIPLAVVMMRSPFLSRTLYPLLVVVQSTP 114

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+++  +      P + ++ L+ F   + ++ +   G +A P +  E++ S   +
Sbjct: 115 VVAIAPIIIVVLGAGD-APRIVITCLITF---FPLVVSTATGLAATPPELIELSRSLRAS 170

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G+R    I LP   PY  +    +   A   ++V+E  +         G+G +I  ST  
Sbjct: 171 GFREITQIRLPFAVPYIFSALKISITLAVIGAVVAEFCA------SEAGVGYFIQLSTSL 224

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
              P+   G+L++    L L
Sbjct: 225 FKLPQAWAGLLVLAAMSLLL 244



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 24/201 (11%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TLR+ L    +S++     A +  +S  L   L P+L ++QS P++      +V      
Sbjct: 71  TLRVALIGYAMSIVIAIPLAVVMMRSPFLSRTLYPLLVVVQSTPVVAIAPIIIV------ 124

Query: 128 PGKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              V+GA  A    I      + +  S    L   P +L E+SRS R SG+++   + +P
Sbjct: 125 ---VLGAGDAPRIVITCLITFFPLVVSTATGLAATPPELIELSRSLRASGFREITQIRLP 181

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL------LA 240
           F++P +   + +S++      V +E            G+G +I L+     L      L 
Sbjct: 182 FAVPYIFSALKISITLAVIGAVVAEFCASEA------GVGYFIQLSTSLFKLPQAWAGLL 235

Query: 241 ILYAM-LTMLGVIFLYDQLLF 260
           +L AM L +   + L  +LLF
Sbjct: 236 VLAAMSLLLFQAVVLTQKLLF 256


>gi|115359284|ref|YP_776422.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284572|gb|ABI90088.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 255

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGMLIAVAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|239817721|ref|YP_002946631.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239804298|gb|ACS21365.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 267

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 19/128 (14%)

Query: 74  SAMVISL---LFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           SA++++L   L +F+ AT+A         +S+R+   L P   ++Q  PI+      +++
Sbjct: 62  SALLVTLKITLLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIW 121

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N      + A L A+F I +    N T      L +I  DL+   +  R + WQ+   
Sbjct: 122 VKNPVAAMTVCAALVALFPIIS----NTTL----GLRSIDPDLQSYFKLNRATRWQQLVR 173

Query: 183 LGVPFSMP 190
           L +P ++P
Sbjct: 174 LRIPSALP 181


>gi|295129956|ref|YP_003580619.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|291375484|gb|ADD99338.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|313772946|gb|EFS38912.1| ABC transporter, permease protein [Propionibacterium acnes
           HL074PA1]
 gi|313793031|gb|EFS41098.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA1]
 gi|313802521|gb|EFS43743.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA2]
 gi|313811083|gb|EFS48797.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA1]
 gi|313831848|gb|EFS69562.1| ABC transporter, permease protein [Propionibacterium acnes
           HL007PA1]
 gi|313834609|gb|EFS72323.1| ABC transporter, permease protein [Propionibacterium acnes
           HL056PA1]
 gi|313840160|gb|EFS77874.1| ABC transporter, permease protein [Propionibacterium acnes
           HL086PA1]
 gi|314964446|gb|EFT08546.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA1]
 gi|314974610|gb|EFT18705.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA1]
 gi|314977197|gb|EFT21292.1| ABC transporter, permease protein [Propionibacterium acnes
           HL045PA1]
 gi|314985706|gb|EFT29798.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA1]
 gi|315078541|gb|EFT50572.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA2]
 gi|315081995|gb|EFT53971.1| ABC transporter, permease protein [Propionibacterium acnes
           HL078PA1]
 gi|315097446|gb|EFT69422.1| ABC transporter, permease protein [Propionibacterium acnes
           HL038PA1]
 gi|327331469|gb|EGE73208.1| ABC transporter, permease protein [Propionibacterium acnes
           HL096PA2]
 gi|327447142|gb|EGE93796.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA1]
 gi|327449823|gb|EGE96477.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA2]
 gi|327456983|gb|EGF03638.1| ABC transporter, permease protein [Propionibacterium acnes
           HL092PA1]
 gi|328761812|gb|EGF75325.1| ABC transporter, permease protein [Propionibacterium acnes
           HL099PA1]
          Length = 296

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227


>gi|148543422|ref|YP_001270792.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|227363571|ref|ZP_03847688.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|325681765|ref|ZP_08161284.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
 gi|148530456|gb|ABQ82455.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|227071367|gb|EEI09673.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|324978856|gb|EGC15804.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
          Length = 221

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQP-------FAQLLAAFPANVFFPLVVSCVSY 443
           VV ++I+ II +P+G       +I S+I+P       FAQLL   P+     L++  +  
Sbjct: 33  VVTLVISMIIALPLG-------YIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGT 85

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   + L +L +      +L N I G +     +KEV  +  +   +  R I +P   
Sbjct: 86  GVVPALIALIVLAL----PPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLAL 141

Query: 504 PYYVTG-AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           PY + G  +       +A++ + + + G   L  TGLG Y       G+    +L +L M
Sbjct: 142 PYILNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAM 201

Query: 563 CCFVLALNRFLWH 575
             F   + +   H
Sbjct: 202 ISFDFLIRKVQKH 214


>gi|294053878|ref|YP_003547536.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
 gi|293613211|gb|ADE53366.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
          Length = 542

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           VW    +    + +I +D   V+R  RL+ W++   + +P +MP +   + +S+  GW  
Sbjct: 417 VWPALVNTALGVASIDKDHINVARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMV 476

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYDQLL 259
           ++A+E +   D      G+G ++    +     +   ILYA   +  + F+ D+++
Sbjct: 477 LIAAEALSSSD------GLGKFVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMM 526


>gi|238751321|ref|ZP_04612814.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
 gi|238710379|gb|EEQ02604.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
          Length = 255

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I G  + ILFN I G         +VA   ++   + +  I LP   P  + G     
Sbjct: 128 VIILGCLFPILFNFIGGVEQVDKKLIDVAKVLNLNKSQIFYRIYLPSALPSILIGLRVGL 187

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           G +W + + +E+ +       + GLG  + ++        +++GVL++ C
Sbjct: 188 GFSWRSLVGAELIA------SSAGLGYMMLDAESLARTDIILVGVLVIGC 231


>gi|153938266|ref|YP_001390731.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. Langeland]
 gi|152934162|gb|ABS39660.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. Langeland]
 gi|295318804|gb|ADF99181.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. 230613]
          Length = 253

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 36/83 (43%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV++G  +      E+A+ + +        I LP   PY ++G +   G  W  S+ SEV
Sbjct: 144 NVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEV 203

Query: 527 ASWGHIHLRTTGLGAYIAESTEK 549
            S     +    L A    +TE+
Sbjct: 204 LSTPKYSIGLNLLNAKATLATEE 226


>gi|149190075|ref|ZP_01868352.1| ABC transporter permease protein [Vibrio shilonii AK1]
 gi|148836105|gb|EDL53065.1| ABC transporter permease protein [Vibrio shilonii AK1]
          Length = 268

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 19/174 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+IP+       +++       KV+ A L   F + T          Y  L 
Sbjct: 110 LLPILITSQAIPVFALAPILMLWLGYGIASKVVMAALIIFFPVTTC--------CYDGLR 161

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N P    ++S++   S +++ W++ +P S+P L   + +++      VVA    V G+ V
Sbjct: 162 NTPVGYLDLSQTMGASRFRQLWHIRLPASLPVLASGIRVAV------VVAPIGAVAGEWV 215

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + L+  ++A L +L      ++ +     + +I W NK
Sbjct: 216 GSSEGLG-YLMLQANARMLIDEMFAALFILASVSVALYFFTDWGLKRLIPWENK 268


>gi|332885955|gb|EGK06199.1| hypothetical protein HMPREF9456_00073 [Dysgonomonas mossii DSM
           22836]
          Length = 253

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 16/181 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+   I I+  I + +G+W+G+   ++S + P        P     P+++       
Sbjct: 63  SLRRIAYSIGISLGIALVLGVWMGYSKRVNSLLGPMIYFSYPIPKLALLPIIMVLFDLGE 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE---VASSFHITGWRWWRYIILPGI 502
            +  + + L+++F         +I    A  N  KE   V  SF  TG +  R+I LP I
Sbjct: 123 TSKIVIVILIVVFQL-------IITIRDAVKNISKENYYVLISFGATGLQKMRHITLPAI 175

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   +    A G A +A    E  ++G       GLG YI +S  +  + ++  G++++
Sbjct: 176 LPEVFSSLRVALGIATSALFFIE--TFG----TDKGLGFYITDSQMRVDYVQMYFGIIVL 229

Query: 563 C 563
            
Sbjct: 230 S 230


>gi|254881663|ref|ZP_05254373.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319643048|ref|ZP_07997681.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
 gi|254834456|gb|EET14765.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317385329|gb|EFV66275.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
          Length = 395

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135
           VY +  A  R     L P+++++  IP  + GF    V+        NL  G+  + G+ 
Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+ T     +T S   ++ N PR + E S +   + WQ  + + +PFS+ G+   
Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSVSGITSG 311

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +++ +       +A  M+     VI      PL  I + IA  + E       Y  L +L
Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371

Query: 250 GVIFLYDQLL 259
           GV+  +  +L
Sbjct: 372 GVVLFFITML 381


>gi|239813638|ref|YP_002942548.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239800215|gb|ACS17282.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 258

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++L+     A   +  R + ++  P+L  +QS+P +      +V+       K+  A L
Sbjct: 72  ILALVLGIPLAVAVSTFRLINLMFYPLLVALQSVPKVALAPLLLVWLGTGMESKLAIAWL 131

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            A F I               L + P++L E++RS R S WQ F  +  P ++P
Sbjct: 132 VAFFPIVVDTA--------AGLQSTPKELLELARSLRASPWQLFAKVRFPAALP 177


>gi|300309985|ref|YP_003774077.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300072770|gb|ADJ62169.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 278

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 25/178 (14%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV    +I S + + +G+ +G      + ++P  Q L A P+  + PL++     
Sbjct: 77  AASLARVAAGFVIGSALAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLL----- 131

Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                 LWL +       L+  G  + +  N++AG     +   EV ++  +       +
Sbjct: 132 ------LWLGIDETPKVVLIAIGAFFPVYLNLVAGIRDIDHKLIEVGTTSGLNTQALIGH 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           I+LP   PY   G       AW   + +E+ +       T G+G Y+     + S P+
Sbjct: 186 ILLPASLPYLFAGLRGGLSLAWMFLVAAELIA------ATKGVG-YLLSDGRESSRPD 236


>gi|253578372|ref|ZP_04855644.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850690|gb|EES78648.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 262

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQS+G+                   +  R+V   ++A ++ I + +W  +   +     P
Sbjct: 65  WQSVGF-------------------SFVRIVTGFLLAVLLGIFLAVWAYWSKTVEILTAP 105

Query: 421 FAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
              ++ + P   F   ++ C+ +    N ++++S LM+      I  N++ G        
Sbjct: 106 VIAVVKSTPVASF---IILCLIWIPSKNLSVFISFLMVLPV---IYTNILEGIRQTDRKI 159

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            E+A  F +   R  RYI +  + PY+++    + G  W A + +EV
Sbjct: 160 LEMAKVFRVNLRRQIRYIYVSQVLPYFLSACRLSLGMCWKAGVAAEV 206


>gi|168491302|ref|ZP_02715445.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC0288-04]
 gi|183574337|gb|EDT94865.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC0288-04]
          Length = 305

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P + +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   VV  +  +++ G   G  L+ I  +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SFAMGSTRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|307545947|ref|YP_003898426.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307217971|emb|CBV43241.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 279

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 29/168 (17%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A +++++        AA S RL   ++PILD MQ++P   +L   + +F           
Sbjct: 101 ATLVAVVIALPVGIAAALSERLYRTIMPILDFMQTMPAFVYLIPAIPFF----------- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
            + ++ AIF + +++M  ++      +  +P +L E + ++  +  QK   + +P S+P 
Sbjct: 150 GIGSVSAIFATVIFSMPPAIRFTTLGIRQVPVELVEAADAYGATRSQKLIKVQLPMSLPT 209

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
              G+   +M+++S          M+V+   +I   G+GS +  AI+ 
Sbjct: 210 VMAGINQTIMLALS----------MVVIA-AMIGADGLGSEVWRAIQR 246


>gi|258406392|ref|YP_003199134.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257798619|gb|ACV69556.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 279

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 18/137 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A  I+++        AA ++    V+ PILD MQ++P   +L   + +F        
Sbjct: 96  VLVATAIAVMIGVPLGIFAALNQTFFRVVTPILDFMQTMPAFVYLIPAIPFF-------- 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
               L  + AIF++ ++ M  S+  +   +  +P +L E + +F  +  QK + L +P +
Sbjct: 148 ---GLGKVAAIFSTVIFAMPPSIRLTSLGIRQVPGELVEAADAFGSTKSQKLFKLQLPLA 204

Query: 189 MP----GLVWNMMMSMS 201
            P    G+   +M+++S
Sbjct: 205 TPTILAGVNQTIMLALS 221


>gi|241258731|ref|YP_002978615.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240863201|gb|ACS60864.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 272

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           A   + +I +  T Q   Y++W     ++ R+   + I++I  + +G+ IG  P++ + +
Sbjct: 54  AIDRLAFIADPRTGQ---YLLWSDTGASLIRLFAGLGISTITALVIGMLIGMLPYLRALL 110

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            PF  +++  P     P++   +     +       L++ G    ++ ++   A   P +
Sbjct: 111 SPFVAVISMVPPLALLPILFIAMGLGEASK----IALIVIGVAPTMIRDLALKALELPRE 166

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               A +   + W+    ++LP I P  +T      G AW   I +E  S
Sbjct: 167 QIVKAETLGGSSWQIGLRVVLPQILPRLITCLRLQLGPAWLFLIAAEAIS 216


>gi|167037243|ref|YP_001664821.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040617|ref|YP_001663602.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X514]
 gi|256751998|ref|ZP_05492867.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914658|ref|ZP_07131974.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X561]
 gi|307724108|ref|YP_003903859.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter sp. X513]
 gi|320115662|ref|YP_004185821.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854857|gb|ABY93266.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X514]
 gi|166856077|gb|ABY94485.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749108|gb|EEU62143.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889593|gb|EFK84739.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X561]
 gi|307581169|gb|ADN54568.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X513]
 gi|319928753|gb|ADV79438.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 299

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 93  SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +++LG  +L P ++I   IP  + G++  TV V F++ + G +  + LA I  +    + 
Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTIMTLP 167

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     ++ ++P ++ E S +   + WQ   ++ +P + PG++  +++ ++  +   +
Sbjct: 168 TITSVSTDAIKSLPTEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227

Query: 209 ASEMIVVGDTVIP 221
           A +M++    VIP
Sbjct: 228 AVQMVIGNRPVIP 240


>gi|119387469|ref|YP_918503.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378044|gb|ABL72807.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 279

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           F    LAA+  R+   L PILD+MQ++P   +L   V+ F     GKV      AI A  
Sbjct: 105 FPLGILAARRPRVEAALRPILDVMQTVPPWVYLIPAVMIFSL---GKV-----PAIIATI 156

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              V  M      +   +P+DL+E+  +         W +  P + P L+
Sbjct: 157 VYGVPPMLRLTTLAFRGVPKDLKELGEAIGAKPGTILWKIEFPAATPTLL 206


>gi|46143846|ref|ZP_00204581.1| COG1176: ABC-type spermidine/putrescine transport system, permease
           component I [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126207769|ref|YP_001052994.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus pleuropneumoniae L20]
 gi|190149552|ref|YP_001968077.1| spermidine/putrescine transporter permease potB [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307249496|ref|ZP_07531484.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251812|ref|ZP_07533714.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307262872|ref|ZP_07544496.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096561|gb|ABN73389.1| spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
 gi|189914683|gb|ACE60935.1| spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306858489|gb|EFM90557.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860719|gb|EFM92730.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306871777|gb|EFN03497.1| Spermidine/putrescine transport system permease protein potB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 288

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|240140551|ref|YP_002965031.1| ABC transporter, permease [Methylobacterium extorquens AM1]
 gi|240010528|gb|ACS41754.1| ABC transporter, permease [Methylobacterium extorquens AM1]
          Length = 353

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y   P + + ++
Sbjct: 171 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F  Q  ++ N             E A +      R  R +I+P + P          G
Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  +I +      F  V   +L++    +A +
Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335


>gi|210623532|ref|ZP_03293877.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275]
 gi|210153590|gb|EEA84596.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275]
          Length = 208

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 4/138 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM RV+     A +I +P+G  +GF       + P    +   P   + PL +      
Sbjct: 75  ITMQRVMKGFGYALVIGLPIGFIMGFSNTCEKVLSPVIDSVRQVPIMSWVPLTIVWFGIG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P ++L   + F   + I+ N I G      D+   A S   + +  ++ +I P   P
Sbjct: 135 D-GPTIFL---IAFSGIFSIVLNTIHGVRTISKDYYNAAKSMGASPFIIFKDVIFPAALP 190

Query: 505 YYVTGAITACGGAWNASI 522
             +TGA  A    W + I
Sbjct: 191 DILTGARLAISNGWMSVI 208


>gi|284030568|ref|YP_003380499.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283809861|gb|ADB31700.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 300

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 15/209 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           +  ++L + W   +++ R V+   I+ +I +P+G+ I     +   I P    L + P+ 
Sbjct: 90  STGEILSLFW---VSVHRAVIGFAISLLIAVPLGLAIANITVVRRGIGPLVSGLQSLPSV 146

Query: 432 VFFPLVVSCVSYYHLNPNL--WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
            + P   + + ++ LN     W+ LL   G    I   +++G    P     V  +    
Sbjct: 147 AWVP---AAILWFGLNDRAIYWVVLL---GAVPSIANGLVSGLDQVPPILPRVGKALGAG 200

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTE 548
            W   RYI+LP   P ++ G       +W + + +E +A+   +     GLG ++     
Sbjct: 201 RWGGIRYILLPAALPGFLGGLKQGWAFSWRSLMAAELIATSPDLG---EGLGQFLHNGMS 257

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                 V  G+L++    + +   ++ PL
Sbjct: 258 LSDISMVFAGILLIFVVGVGIELLVFRPL 286


>gi|148258970|ref|YP_001243555.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146411143|gb|ABQ39649.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Bradyrhizobium sp. BTAi1]
          Length = 295

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 13/93 (13%)

Query: 138 AIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A+  I   ++W  T      M   L  +P D+ E +     S WQ+FW         G+ 
Sbjct: 157 ALACIIAVEIWQWTPFIILMMLAGLQTLPEDVYEAAELENASAWQQFW---------GIT 207

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + MM+ +SG   F+   E   + DTV  + G G
Sbjct: 208 FPMMLPISGAVVFIRLIESYKIMDTVFVMTGGG 240


>gi|145534309|ref|XP_001452899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420598|emb|CAK85502.1| unnamed protein product [Paramecium tetraurelia]
          Length = 486

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           Y+T A K++ L   +  ++D+M    IL  +   ++  +N Y   ++ AE    F  ++S
Sbjct: 82  YST-AFKNKELDKAIDAVVDVM----ILHVVRDNILGLLNTY---ILVAETYLKFTYYSS 133

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            +   T++    LC+I  D+EEV +SFRL 
Sbjct: 134 AI--QTYTQLLHLCDICNDVEEVQKSFRLK 161


>gi|222054757|ref|YP_002537119.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564046|gb|ACM20018.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 263

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 40/247 (16%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVN---------HFTYQDVLYVIWLG 383
           +NQR+  +  +  +  +  VAI + WQ++   GYI             T+ D+L    + 
Sbjct: 5   TNQRLLKIKHLLQYLSLS-VAILVVWQALFQLGYIKPIILPPPSRIALTFLDLLKSGEMA 63

Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I++ RV+    IA+++ + +GI IG    +        Q++   P   + PL +  
Sbjct: 64  KHLGISVLRVLEGFGIAALLGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAI-- 121

Query: 441 VSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
                    LW  +       ++  G  + ++ N I G     + F EVA    +   ++
Sbjct: 122 ---------LWFGIGEQSKVYIIFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKF 172

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++PG  P  +TG       AW   + +E+ +       ++G+G  I ++ +     
Sbjct: 173 IGQMVIPGALPAIMTGIRIGLMVAWMCVVAAELIA------ASSGIGYLIMDARQLSQSD 226

Query: 554 EVVLGVL 560
            V++G++
Sbjct: 227 VVLVGMI 233


>gi|323697512|ref|ZP_08109424.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323457444|gb|EGB13309.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 262

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 12/161 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T  R +    +A+++   VGI  G  P ++  ++P   +L   P   +  L +      
Sbjct: 66  VTAGRALGGFAVAAVLGSTVGILAGLHPALARTLRPITAMLLGIPPIAWIVLAMLWFGTT 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L P     +  +  T   I+F V + GA       +++  SF       +  + LP I 
Sbjct: 126 GLTP-----VFTVVVTALPIVFAVAVEGARTRDRGLEDMGRSFDTPPAMLFLDVRLPHIL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            Y   G +TA G +W  ++++E+ +       T G+GA +A
Sbjct: 181 SYLFPGWVTALGLSWKVAVMAELLA------STDGIGADLA 215


>gi|295689420|ref|YP_003593113.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter segnis ATCC 21756]
 gi|295431323|gb|ADG10495.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter segnis ATCC 21756]
          Length = 269

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R    + IA ++ + +G+  G      + + P  Q+    P+    PL +    +
Sbjct: 73  AVSLARAGAGLSIALVVAVTLGLISGLSRWGETLVDPLMQIKRTIPSLALTPLFIV---W 129

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + +     ++L+ +  T + +  N+ +G  +      E A SF + GW   R +ILPG  
Sbjct: 130 FGIGETPKIALIAVAAT-FPLYLNLFSGIRSVDVRLVEAARSFGLRGWSLVREVILPGAL 188

Query: 504 PYYVTGAITACGGAWNASIVSE 525
           P +  G   A G +    ++SE
Sbjct: 189 PSFFVGLRYALGVSVLVLVISE 210


>gi|239813174|ref|YP_002942084.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799751|gb|ACS16818.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 292

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV    ++A+++ +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 101 MTVWRVFGGFLLAAVLAVPLGIAMGTWKAVEAFFEPFVSFCRYLPASAFIPLLILWAGLG 160

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G+ + I+  V         D  E A +           +++PG  
Sbjct: 161 EMQ-----KLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGAKSRGIVARVLIPGAA 215

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 216 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 252


>gi|152991333|ref|YP_001357055.1| sulfonate/nitrate ABC transporter permease [Nitratiruptor sp.
           SB155-2]
 gi|151423194|dbj|BAF70698.1| sulfonate/nitrate ABC transporter, permease [Nitratiruptor sp.
           SB155-2]
          Length = 260

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +    + G     + F+E+A +F +     +  I LP IF Y     ++A G AW   ++
Sbjct: 144 VFIGALQGTRTLEDKFEEMADTFKVPKLMKFTDIYLPHIFSYIFPSWVSALGMAWKIVVM 203

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +E+ +       + G+GA +A +  +      +  V+IM   ++ +      P+
Sbjct: 204 AELLA------TSDGIGAALAMARSQLDTKTALALVVIMIALLMIVEYIFLEPI 251


>gi|120403531|ref|YP_953360.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119956349|gb|ABM13354.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 310

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +NL      G   +AIF I  S++W  T      +   L  +P D++E ++    + WQ+
Sbjct: 157 LNLTEFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQVPEDMQEAAKVDGATAWQR 216

Query: 180 FWYLGVP 186
            W + +P
Sbjct: 217 LWKITLP 223


>gi|15891015|ref|NP_356687.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15159340|gb|AAK89472.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 283

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 9/129 (6%)

Query: 66  SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           S  TL +++ A++IS+   F    LA++++R    L P+LDIMQ++P   +L   V+ F 
Sbjct: 91  SMQTLALVTVAVIISVSIAFPLGILASRNKRFETALRPLLDIMQTVPPWVYLIPAVMIFS 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V      AI A     V  M      +   +P+DL E+ ++   S       + 
Sbjct: 151 L---GRV-----PAIIATIVYGVPPMLRLTTLAFNQVPKDLLELGQASGASPRAILLKIE 202

Query: 185 VPFSMPGLV 193
           +P + P L+
Sbjct: 203 IPSATPTLL 211


>gi|121603147|ref|YP_980476.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120592116|gb|ABM35555.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Polaromonas naphthalenivorans CJ2]
          Length = 298

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%)

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           YQ    +P+DLEE +     S W+ +W + +P S P +    ++     W  ++   M+V
Sbjct: 180 YQFFIALPKDLEEAALMDGASRWRIYWSIVMPLSKPVIATVTVLQFLARWGDLLWPVMVV 239

Query: 215 VGDTVIPLP 223
            GDT   LP
Sbjct: 240 RGDTFATLP 248


>gi|325497215|gb|EGC95074.1| ABC transporter membrane protein [Escherichia fergusonii ECD227]
          Length = 217

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+      N   PL V
Sbjct: 20  LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 76

Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             ++   L      +++ +F  +   I+ N  AG +A P   KE A    +T W+    +
Sbjct: 77  LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 136

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP  +P  ++G   A      A+I+   A    + +  +  G  I        FP ++L
Sbjct: 137 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 189

Query: 558 GVLIMCCFVLALNRFL 573
           G      F L L+  L
Sbjct: 190 GATATALFALILDSLL 205


>gi|296333343|ref|ZP_06875796.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|296149541|gb|EFG90437.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
          Length = 309

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSIMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|149002789|ref|ZP_01827715.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|147759083|gb|EDK66077.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS69]
          Length = 305

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           P + +  +LP       + +LSA++ +         +   S +   +L P ++++  IP 
Sbjct: 71  PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + GF+   +V  +  +++ G   G  L+ I  +F   +  +TF    SL  +PR   E 
Sbjct: 131 VVYGFIGLQIVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP
Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242


>gi|148265899|ref|YP_001232605.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
 gi|146399399|gb|ABQ28032.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
          Length = 262

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R  +   + +   F+   L    R L  ++ P+ + ++ +P+L ++   +++       
Sbjct: 72  IRFFAGTFLGITAGFLLGMLFGMFRTLEKLVAPLFNAIRQVPLLAWIPLIIIF------- 124

Query: 130 KVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              G AE + IF I     + +  S +  +  + ++  EV R F     +    + +P  
Sbjct: 125 --CGIAEASKIFFIALGCSFPIVLSTFDGIRGVRKEYVEVGRVFGFGRIRLIRKIFLPSV 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +P LV  + MS++ GW  +VA+E+ +         GIG+ I 
Sbjct: 183 LPSLVTGLRMSLNIGWGQLVAAELFMFTQA----GGIGNMIG 220


>gi|319782578|ref|YP_004142054.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168466|gb|ADV12004.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 267

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 23/218 (10%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +A + I  I N     D++        ++ RV+   ++  I+ IPVG  +G+     S I
Sbjct: 56  VASRFIDLIANGQLATDIMS-------SLARVMTGFLLGVILAIPVGFVMGWYKVARSLI 108

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P+ Q     P     PL +  +      P +++  L  F      L +V+A      + 
Sbjct: 109 EPYLQFFRMIPPLAIIPLAIVTMGIDE-TPKVFVIFLASF------LASVVATYQGVISV 161

Query: 479 FKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
            K + ++  + G +    +  +I+P   P+ + G     G AW   + +E+ +       
Sbjct: 162 DKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRIGLGSAWATLVAAELIA------A 215

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            TGLG  + ++      P + + ++ +    LA++R L
Sbjct: 216 QTGLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRIL 253


>gi|284048224|ref|YP_003398563.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
 gi|283952445|gb|ADB47248.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
          Length = 247

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            EL     I  +  + M  +M        R L EV R    S WQ  W + +P ++PG++
Sbjct: 116 GELPKTIIIVLASFFPMYLNMDDGFRRCDRKLLEVGRMLCFSPWQSLWKIRLPSALPGIL 175

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGV 251
             + + M      ++ +EMI          G+G  I  A A+   D + I    +  LG+
Sbjct: 176 TGLRVGMGYSLRAIIGAEMIAADS------GLGYLILDAQAMSRSDKVFIGILTIGALGL 229

Query: 252 I 252
           +
Sbjct: 230 V 230


>gi|256391212|ref|YP_003112776.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256357438|gb|ACU70935.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 312

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)

Query: 139 IFAIFTSQVWNMT-FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           + A+  + VW  T FSM     +L ++P D++E +     +GW++ W + +P   P +V 
Sbjct: 179 MLAVIIANVWRGTAFSMLVYNAALDDVPADVQEAAELDGATGWRRLWNVILPLIRPSIVT 238

Query: 195 NMMM 198
           N+M+
Sbjct: 239 NLML 242


>gi|303258016|ref|ZP_07344025.1| phosphate ABC transporter, permease protein PstC [Burkholderiales
           bacterium 1_1_47]
 gi|330999431|ref|ZP_08323145.1| phosphate ABC transporter, permease protein PstC [Parasutterella
           excrementihominis YIT 11859]
 gi|302859359|gb|EFL82441.1| phosphate ABC transporter, permease protein PstC [Burkholderiales
           bacterium 1_1_47]
 gi|329574857|gb|EGG56416.1| phosphate ABC transporter, permease protein PstC [Parasutterella
           excrementihominis YIT 11859]
          Length = 293

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 27/203 (13%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAEL--AAIFAIFTSQV 147
           S RL  +  P ++++ ++P  ++GF+  TV+  F+  Y G   G  +  AAI     +  
Sbjct: 99  SSRLRSIFKPFIELLAAMPSVVIGFVGMTVLAPFLQDYFGAPTGLNILNAAILLALMAVP 158

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
              T S   +L ++PR L+E S +   + W+    + +P +  G+   +M+ +S     V
Sbjct: 159 TICTIS-EDALRSVPRSLKESSLALGATHWETLTTVTIPAAFSGIATGVMLGLSR----V 213

Query: 208 VASEMIVVG-------------DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG-VIF 253
           +   M+V+              D V P+P   + I   + E    +  Y  L  +G V+F
Sbjct: 214 IGETMVVLMVAGGAALIPESLFDPVRPMP---ASIVAEMAESPFGSSHYHALFAIGIVLF 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTT 276
            +  L      + S K++L+ ++
Sbjct: 271 FFTFLCNLAAFLVSQKYKLKASS 293


>gi|293605708|ref|ZP_06688085.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815887|gb|EFF74991.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 251

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 158 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 211

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           E      V+  +L++      +++F+   L     R LR
Sbjct: 212 EIADMTGVMTNILVIAVLAALIDQFVLENLK---HRLLR 247


>gi|241205621|ref|YP_002976717.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859511|gb|ACS57178.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 304

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 137 IIRMISWIPVLGRNGLVNSTLIKMGIIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 196

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    SGWQ  W +  P + PG        M+ G  FVV   M     
Sbjct: 197 LMRIDRSLFEAARDAGASGWQVLWNVVFPLAKPG--------MAIGTIFVVTLVMADFST 248

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 249 VQVMSGGQSASVALMMKNQ 267


>gi|17548288|ref|NP_521628.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430534|emb|CAD17218.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 298

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 23/170 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS+ +ISL         AA+SR +  V+ PILD+MQ++P   +L    + F     G+V 
Sbjct: 96  LSSTIISLALGVPLGIWAARSRVVSAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190
           G     IFA+    V   +  + Q    +  +L E   +F  +  Q  + + +P ++P  
Sbjct: 153 GILSTVIFAM-PPAVRLTSLGIRQ----VNMELVEAGLAFGCTPRQLLYKVQIPNALPSI 207

Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             G+   +MM++S     V+ + M+  G       G+G+ +  +I+  D+
Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNEVLASIQRLDI 246


>gi|331701700|ref|YP_004398659.1| phosphate ABC transporter inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129043|gb|AEB73596.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
          Length = 309

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +R   +L P+ +++  IP  + GF+  +VV  +  N + G   G  L+  F +F   +  
Sbjct: 119 KRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNTFGGSGFGI-LSGTFVLFVMILPT 177

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +      SL  +P+   + S +   + WQ  W + +  + PG++  ++  M+  +   +A
Sbjct: 178 IVSMTVDSLRGVPKFYRQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALA 237

Query: 210 SEMIVVGDTVIP 221
            +M++    ++P
Sbjct: 238 VQMVIGNAALMP 249


>gi|330810501|ref|YP_004354963.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378609|gb|AEA69959.1| Glycine betaine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 282

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++IS+   F    +AA+ +R+   L+PIL+IMQ++P   +L   V+ F     G+V   
Sbjct: 100 AVLISVTIAFPLGVVAARVKRVDDALMPILNIMQTVPPWVYLIPAVMLF---SLGRV--- 153

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP---- 190
              AI A     +  M      +   +P+DL E+ ++   S     + + +P + P    
Sbjct: 154 --PAIIATIVYGIPPMLRLTTLAFKQLPKDLLELGQASGASPKDILFKIELPTAAPTLLV 211

Query: 191 GLVWNMMMSMS 201
           GL   ++MS++
Sbjct: 212 GLNQCILMSLA 222


>gi|304315063|ref|YP_003850210.1| ABC-type transporter, permease component [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588522|gb|ADL58897.1| predicted ABC-type transporter, permease component
           [Methanothermobacter marburgensis str. Marburg]
          Length = 269

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ I++       +HS+      +T+  +  M+ +LL  +   +L+  S R   ++  +L
Sbjct: 37  PQSILNSFTSADMIHSVKLSLLTSTITTVIVMLSALLIAY---SLSEDSFRGKSIVKTVL 93

Query: 105 DIMQSIP-------ILGFLTFT-VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
           DI  + P       +L FL  T + Y M+    +++  +L  I A F   +       Y 
Sbjct: 94  DIPIAFPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLGVICAQFFVSLPYTVRICYS 153

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG--GWFFVVASEMIV 214
           + CNI R L+ VSRS   + ++ F  + +P S  G++   +++ S   G F  V   +IV
Sbjct: 154 TFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATIITFSRCIGCFGAV---LIV 210

Query: 215 VGDT 218
            G T
Sbjct: 211 AGGT 214


>gi|209964747|ref|YP_002297662.1| binding-protein-dependent transport systems inner membrane
           component, putative [Rhodospirillum centenum SW]
 gi|209958213|gb|ACI98849.1| binding-protein-dependent transport systems inner membrane
           component, putative [Rhodospirillum centenum SW]
          Length = 263

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY--FMN 125
           T L  + A V++++     A L ++SR L   L P   I+Q  P++      V++  +  
Sbjct: 59  TVLITVQAFVLAVVSGVALAVLFSRSRLLAAALYPYAVILQVTPVVAIAPLVVIWVGYER 118

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG---WQKFWY 182
           +    +I A + A F I +    N T  +     N+ RDL      FRL G   WQ  W 
Sbjct: 119 IDLALLILAWIVAFFPILS----NATLGLSSVDPNL-RDL------FRLHGASRWQTLWR 167

Query: 183 LGVPFSMPGLVWNMMMSMSGG 203
           L +P ++P ++    M +SGG
Sbjct: 168 LQIPSALPYILAG--MKVSGG 186


>gi|305675152|ref|YP_003866824.1| phosphate ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|305413396|gb|ADM38515.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 309

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSIMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               V+P
Sbjct: 245 GNTRVLP 251


>gi|261339268|ref|ZP_05967126.1| hypothetical protein ENTCAN_05506 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319127|gb|EFC58065.1| aliphatic sulfonates ABC transporter, permease protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 263

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 23/179 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + +  +  I R
Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRTIDR 152

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F ++ +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 153 GLVEMARSYGLSGFALFTHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206

Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           GIG Y+A+  +E    D++    +LYA+L  L  +    Q L R  + W+  +  +   
Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADV--SAQWLERSWLRWNPAYSPQEAK 262


>gi|332674798|gb|AEE71614.1| putative transport system permease protein [Propionibacterium acnes
           266]
          Length = 249

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL
Sbjct: 172 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 212


>gi|298674764|ref|YP_003726514.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298287752|gb|ADI73718.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 278

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 18/163 (11%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           LD   L     +T   ++S+ VI+L+       L++K+      + P+LD+MQ++P   +
Sbjct: 84  LDNLQLWSLGMQTIALVISSAVIALIIGIPVGILSSKNDNFKAAIKPLLDLMQTMPPFVY 143

Query: 116 LTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           L   V++F +   PG +     A I       +      + Q    +P +L EV+ +F  
Sbjct: 144 LIPAVIFFGLGNVPGLI-----ATIVFAMPPGIRLTDLGIRQ----VPTELVEVADAFGS 194

Query: 175 SGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMI 213
           +  QK   + +P +    M G+   +M+S+S     VV + MI
Sbjct: 195 TPMQKLVKVQLPVALQTIMTGINQVIMLSLS----MVVIAAMI 233


>gi|289426680|ref|ZP_06428409.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|289160175|gb|EFD08350.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|313806536|gb|EFS45043.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA2]
 gi|313817403|gb|EFS55117.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA2]
 gi|313821854|gb|EFS59568.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA1]
 gi|313824252|gb|EFS61966.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA2]
 gi|313826616|gb|EFS64330.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA1]
 gi|314926668|gb|EFS90499.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA3]
 gi|314961128|gb|EFT05229.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA2]
 gi|314980391|gb|EFT24485.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA2]
 gi|314987231|gb|EFT31322.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA2]
 gi|314988879|gb|EFT32970.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA3]
 gi|315082507|gb|EFT54483.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA2]
 gi|315086220|gb|EFT58196.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA3]
 gi|315087803|gb|EFT59779.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA1]
 gi|327333456|gb|EGE75176.1| ABC transporter, permease protein [Propionibacterium acnes
           HL096PA3]
 gi|327445522|gb|EGE92176.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA2]
 gi|328758764|gb|EGF72380.1| ABC transporter, permease protein [Propionibacterium acnes
           HL020PA1]
          Length = 252

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 215


>gi|241765783|ref|ZP_04763725.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241364321|gb|EER59466.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 278

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV    I+A+++ +P+GI +G    I +  +PF       PA+ F PL++      
Sbjct: 86  MTVWRVFGGFILAAVVAVPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG 145

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L+IF G+ + I   V         D  E A +           +++PG  
Sbjct: 146 ETQ-----KILVIFIGSVFQITLMVAVTVGGARRDLVEAAYTLGAGHKGIVTRVLIPGAA 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 201 PEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 237


>gi|218260367|ref|ZP_03475723.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224558|gb|EEC97208.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii
           DSM 18315]
          Length = 464

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 14/165 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR    M ISL+     + L  K   +  +  P+L IM++IP++ F+   +++     
Sbjct: 61  TVLRGTIGMSISLMAAVGVSFLFYKCEWMYELFRPLLAIMRAIPVISFILLALIF----- 115

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + AE   +   F +    +T ++ + + +  ++L  ++R F++  W +   +  P 
Sbjct: 116 ----LNAESIPLIIAFLTMFPLLTENLTKGIRSRRKELSIMARQFKIGRWNRLTQVTYPQ 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             P L   +  ++  GW  ++  E++         PGIG  +  A
Sbjct: 172 LKPFLYSGLASALGFGWRAIIMGEVLAQCS-----PGIGGEMKQA 211


>gi|325526214|gb|EGD03845.1| putative ABC transporter system permease [Burkholderia sp. TJI49]
          Length = 258

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 79  SLLFTFVYATLA-AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVI 132
           SL+ T V  T   A +R  G   +P    I+DI Q+ P +  L   V      L P  +I
Sbjct: 76  SLIGTLVAVTAGIAVTRPSGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLI 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L  +  +F S +          L ++PRD+ + +R   +SGWQ+   + +P + P +
Sbjct: 135 ALVLYGLLPVFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLVSVELPLAFPVI 186

Query: 193 VWNMMMSM 200
           V  + +++
Sbjct: 187 VNGIRLAV 194


>gi|322514924|ref|ZP_08067939.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, permease protein [Actinobacillus ureae ATCC
           25976]
 gi|322119112|gb|EFX91266.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, permease protein [Actinobacillus ureae ATCC
           25976]
          Length = 288

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P IG+ I       +  A+  A+
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288


>gi|314931272|gb|EFS95103.1| ABC transporter, permease protein [Propionibacterium acnes
           HL067PA1]
          Length = 177

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL
Sbjct: 56  FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 96


>gi|317053918|ref|YP_004117943.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316951913|gb|ADU71387.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 259

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +   +P+++ E  R+     WQ+FW L VP + PGL 
Sbjct: 147 AFAGVPKEILEAGRTLGARPWQRFWRLSVPIAAPGLA 183


>gi|253578431|ref|ZP_04855703.1| binding-protein-dependent transport system inner membrane component
           [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850749|gb|EES78707.1| binding-protein-dependent transport system inner membrane component
           [Ruminococcus sp. 5_1_39BFAA]
          Length = 240

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           N ++++S LM+      I  N++ G     +   E+A  F +   R  RYI +  + PY+
Sbjct: 108 NLSVFISFLMVLPV---IYTNILEGIRQTDSKILEMAKVFQVNPGRKIRYIYVSQVLPYF 164

Query: 507 VTGAITACGGAWNASIVSEV 526
           ++    + G  W A + +EV
Sbjct: 165 LSACRLSLGMCWKAGVAAEV 184


>gi|148272971|ref|YP_001222532.1| putative anion ABC transporter permease [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830901|emb|CAN01845.1| putative anion ABC transporter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 287

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+V       +   L QY + +  R+L    +      V   +   SR   ++L P  
Sbjct: 75  PLDVVRAGAQLAEQGILGQYVAISLQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTA 134

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              +++P L ++   +++       KV    + A+F ++T+        +  +L ++   
Sbjct: 135 GAFRTVPSLAWVPLLLLWMGINEDSKVTLVAIGAMFPVYTT--------VAGALRHVDPH 186

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           L EV R+F L+       + +P  +P +V  + ++++  W F+VA+E++
Sbjct: 187 LVEVGRAFGLTRIPLLVTVQLPAVLPAVVSGLRLALAQSWLFLVAAELL 235


>gi|146276801|ref|YP_001166960.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555042|gb|ABP69655.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 266

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 15/190 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T  R L    I          L   SR L  ++ P +   +   +  ++    ++F  
Sbjct: 73  AETLKRNLGGFAIGAGVGVALGALLGTSRLLARIIGPTVVAHRQTALFAWVPLIAMWFGG 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              GK+    +AA    F   V N     ++ +  +P  L+E++ + R S  Q   ++ +
Sbjct: 133 GDQGKIAFVAMAA----FQPTVINT----WRGIAGVPGGLQELAAALRFSRLQYLRHVAL 184

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILY 243
           P ++P +   +  ++   W   V SE+ +        PG+G  +    +  E DLL ++ 
Sbjct: 185 PAALPQIFTGLHAALIYAWLATVGSELFLN-----ITPGLGGRLIEGSQLFEMDLLFLVI 239

Query: 244 AMLTMLGVIF 253
            +  ++G+++
Sbjct: 240 VIFGLVGLVY 249


>gi|146277962|ref|YP_001168121.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145556203|gb|ABP70816.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 266

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G  +G        +  F   LAA P   F PL++  +           ++++
Sbjct: 84  AILVGIPLGALMGMVRLFGRTVDVFVFALAATPRVAFIPLIILLLGLGI----EAKAMIV 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             G    I+ N  AG  A   +  E+A S   +  R   +++LPG  P+ V G
Sbjct: 140 FLGAVMPIILNTYAGVQARDEELIEMARSTGASATRIQIHVVLPGALPFLVVG 192


>gi|314969545|gb|EFT13643.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA1]
          Length = 252

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL
Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 215


>gi|307946907|ref|ZP_07662242.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307770571|gb|EFO29797.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 257

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 29/175 (16%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI- 139
           LF+FV A L           VP++  +  IP +  L   V++F     G   G++ A I 
Sbjct: 92  LFSFVRAGL-----------VPLIAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIA 135

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F  FT  V     + Y ++ N+ R L  + +SF L+ +     + +P +MPG++  + +S
Sbjct: 136 FGTFTPTV----VATYGAVDNVDRTLIRMGQSFGLTWFSIVRKIVLPGAMPGILSGLRIS 191

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252
           ++     +VA+EM+  G       GIG+YI  A ++ + D L     +L++LGV+
Sbjct: 192 LAIAIILLVAAEML--GAEY----GIGAYILQAGSLYDLDRLFAGVVILSVLGVL 240


>gi|256393833|ref|YP_003115397.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256360059|gb|ACU73556.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 271

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +++ ++S +++  L  + YA L+ + R +G V      ++ +I I   +     YFM  +
Sbjct: 74  SSIAIVSHLILCSLGGYAYARLSFRGRTVGFV-----TLVATIMIPTQMLMIPTYFMFTH 128

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G +    L A F  F +  + + F M Q   ++P+DLEE  R   L+ +  F+ + +P 
Sbjct: 129 LGLI--DTLGAAFVPFLTSAFGV-FLMRQFFLSLPKDLEEAGRIDGLTTFGVFFRIVLPL 185

Query: 188 SMPGLVWNMMMSMSGGW 204
           + P L    + ++   W
Sbjct: 186 ARPALATLAVFTLLNSW 202


>gi|219870515|ref|YP_002474890.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Haemophilus
           parasuis SH0165]
 gi|219690719|gb|ACL31942.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Haemophilus parasuis SH0165]
          Length = 245

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R++V + +A +  IP+G+ +G    +     P  Q L       + P+VV  +       
Sbjct: 64  RIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGV----G 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +L +  L+ F   W ++ +  +G  +    +  ++ S   +      +II+P I  + +T
Sbjct: 120 DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILT 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G   + G AW   +  E+           GLG +I ++ ++ ++ E++  V+++
Sbjct: 180 GLRVSLGIAWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVI 227


>gi|209809281|ref|YP_002264819.1| putative binding protein-dependent transport system, membrane
           component [Aliivibrio salmonicida LFI1238]
 gi|208010843|emb|CAQ81242.1| putative binding protein-dependent transport system, membrane
           component [Aliivibrio salmonicida LFI1238]
          Length = 272

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 21/175 (12%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+IP+       +++       KV+ A L   F + T          Y  L 
Sbjct: 113 LLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAALIIFFPVTTC--------CYDGLR 164

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N P    +++ +   S WQ   Y+ +P ++P L   + +++      VVA    VVG+ V
Sbjct: 165 NTPSGYLDLAHTMGASKWQLLKYVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 218

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + ++  ++A L +L  +     FL D +L + +I W + 
Sbjct: 219 GSSEGLG-YLMLQANARMMIDEMFAALFILAALSVSLYFLAD-VLIQKLIPWQHD 271


>gi|15673433|ref|NP_267607.1| betaine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|7188801|gb|AAF37879.1|AF234619_2 OpuABC [Lactococcus lactis]
 gi|12724442|gb|AAK05549.1|AE006375_3 betaine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|326406928|gb|ADZ63999.1| glycine betaine/carnitine/choline ABC transporter, permease and
           substrate-binding protein [Lactococcus lactis subsp.
           lactis CV56]
          Length = 573

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 120 AKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +  +L E + SF  +  QK + L  P +    M G+   +M+++S    
Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252


>gi|254253737|ref|ZP_04947054.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124898382|gb|EAY70225.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 248

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V +  A ++ +P G  IG    +   + P  Q L       + P+ V  +  
Sbjct: 54  ATSVKRVAVGLAWALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIAVMSLGV 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +  +  L+ F   W +L N  AG +     + E+  S   T      +I +PGI 
Sbjct: 114 ----GDRAVYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHIYVPGIA 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG   A G  W   + +E+         + GLG  I ++ ++ ++ E+   +L++ 
Sbjct: 170 AHVLTGVRLAIGVLWIVLVPAEMLG------VSAGLGYLILDTRDRLAYSELTAVILVIG 223

Query: 564 CF 565
             
Sbjct: 224 AL 225


>gi|107028306|ref|YP_625401.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686300|ref|YP_839547.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105897470|gb|ABF80428.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652015|gb|ABK12654.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 324

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  +            E A +      +   ++++PG+ P          
Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G AW   IV+E+         ++G+  YI++      F  V   +L++    L  +
Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305


>gi|302540955|ref|ZP_07293297.1| aliphatic sulfonates ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458573|gb|EFL21666.1| aliphatic sulfonates ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 270

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 32/71 (45%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  +++  NV AG         E  +S  +  W   R+++LPG  P  +TG   + 
Sbjct: 141 LIALGVTFHLYLNVYAGIRGVDAQLIEAGNSLGLGRWGLIRHVVLPGALPGAMTGLRYSL 200

Query: 515 GGAWNASIVSE 525
             AW A +  E
Sbjct: 201 ATAWLALVFGE 211


>gi|281492007|ref|YP_003353987.1| glycine betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375716|gb|ADA65220.1| Glycine betaine/carnitine/choline ABC transporter, permease and
           substrate-binding protein [Lactococcus lactis subsp.
           lactis KF147]
          Length = 573

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+  T ++ N
Sbjct: 120 AKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205
           +       +  +  +L E + SF  +  QK + L  P +    M G+   +M+++S    
Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 M+V+  ++I  PG+G  +  A++  D+
Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252


>gi|269125624|ref|YP_003298994.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268310582|gb|ACY96956.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 287

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L ++++IP +  +   +V+F        IG E + I  I  + ++ +  + Y  +  I R
Sbjct: 129 LQMLRTIPFIAMVPLFIVWFG-------IGEE-SKIALIVGASIFPVYLNTYHGIRGIDR 180

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            L E++++F LS  Q    + VP +MP ++  +  +       +VA+E I
Sbjct: 181 RLIELAQTFELSRRQVIGLIVVPLAMPQILVGLRYAAGTALLALVAAEQI 230


>gi|225020644|ref|ZP_03709836.1| hypothetical protein CORMATOL_00651 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946590|gb|EEG27799.1| hypothetical protein CORMATOL_00651 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 347

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 137 AAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           AA  A+  + VW     M   +   L  IPRD+ E ++    + WQ+FW + +P   P L
Sbjct: 172 AARLAVIIADVWKTTPFMALLILAGLQMIPRDVYEAAKVDGANAWQQFWKITLPLVKPAL 231

Query: 193 V 193
           +
Sbjct: 232 M 232


>gi|170738807|ref|YP_001767462.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168193081|gb|ACA15028.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 288

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    IA++  + +G+ IG+   +   ++P  Q+L   P   + PL +       
Sbjct: 92  SLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWIPLAIIWFGIAD 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P ++L  L  F   + IL N I G  +   +     +    +  +    I+LP   P 
Sbjct: 152 -RPAIFLVFLGAF---FPILMNTIHGVRSVDRNLIRAGAMMGASERQLLARIVLPAALPA 207

Query: 506 YVTGAITACGGAWNASIVSEV 526
            V+G   A G AW  ++ +E+
Sbjct: 208 IVSGLRIAIGSAWMLTVTAEM 228


>gi|146309335|ref|YP_001189800.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145577536|gb|ABP87068.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 264

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +L+             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYALLGKLADIAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVWLRWHPAY 257



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 21/155 (13%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      KV    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDEAAKVFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVI 252
           GIG Y+A+  +E    D   L  +LYA+L  L  I
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAILLYALLGKLADI 241


>gi|145224434|ref|YP_001135112.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315444766|ref|YP_004077645.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Mycobacterium sp. Spyr1]
 gi|145216920|gb|ABP46324.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Mycobacterium gilvum PYR-GCK]
 gi|315263069|gb|ADT99810.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Mycobacterium sp. Spyr1]
          Length = 310

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +NL      G   +AIF I  S++W  T      +   L  +P D++E ++    + WQ+
Sbjct: 157 LNLTDFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQVPEDMQEAAKVDGATAWQR 216

Query: 180 FWYLGVP 186
            W + +P
Sbjct: 217 LWKITLP 223


>gi|304395160|ref|ZP_07377044.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357413|gb|EFM21776.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 271

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++W+   I++ R++  + I+S+I + +GI  G  P   + + PF  +++  P     P+
Sbjct: 69  YLLWVDTWISLSRLLTGLAISSLIGLCIGIAAGVFPMTRAALSPFMTVVSMIPPLALLPM 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VMLIVIGITPMLARDLEHRAREIPAELFIKAQTLGANSWTVVLR 184

Query: 497 IILPGIFPYYVTGAITACGGAW----NASIVSEVASWGH 531
           ++LP +    +T      G AW    +A  +S  A  G+
Sbjct: 185 VVLPQLLSRLITSLRLLLGSAWLFLISAEAISATAGLGY 223


>gi|170693015|ref|ZP_02884176.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142013|gb|EDT10180.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 292

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130
           +L   ++     FV  +LA  S R+G  L+ +L  M   +P +  L   +++F  L  G 
Sbjct: 99  LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++       F +  S +W +  + Y    ++P  L    R++ L+G +    + +P ++P
Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLLILMPAALP 209

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            ++  + +  +  W  ++A+E++
Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232


>gi|91778565|ref|YP_553773.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91691225|gb|ABE34423.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 281

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/180 (18%), Positives = 79/180 (43%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + ++ A ++ +P+G  IG    + + + P  Q L       + P+ V  +    
Sbjct: 88  SLRRIAIGLLWALVVGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGV-- 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  L+ F   W ++ +  AG +     + ++  S   T      Y+ +PGI  +
Sbjct: 146 --GDRAVYFLLAFAAVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAH 203

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+         ++GLG  I ++ ++ ++ E+   +L++   
Sbjct: 204 VLTGVRLAIGILWIVLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGAL 257


>gi|134291004|ref|YP_001114773.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134134193|gb|ABO58518.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 324

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 10/168 (5%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y   P +    
Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  V            E A +      +   ++++PG+ P          
Sbjct: 196 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTNKLKLLTHVVIPGVLPDLYRDQRILL 255

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G AW   IV+E+         ++G+  YI++      F  V   +L++
Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMI 297


>gi|313204231|ref|YP_004042888.1| phosphate ABC transporter membrane protein 1, phot family
           [Paludibacter propionicigenes WB4]
 gi|312443547|gb|ADQ79903.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Paludibacter propionicigenes WB4]
          Length = 396

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 12/193 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNL 126
           L A+++SL F    A   A+  + R+  +L PI++++  IP  + GF    V+  +   L
Sbjct: 183 LGAILLSLPFGIAVAVYLAEIATMRVRNILKPIIELLAGIPSVVYGFFGLVVIVPFLQKL 242

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +   V    LA    +    +  +      ++  +PR ++E S +   + WQ  + + +P
Sbjct: 243 FHLPVGETALAGSVVLGIMALPTIITVAEDAMRTVPRAMKEASLALGATHWQTIYKVIIP 302

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           ++  G+    ++ +       +A  M+     VI      P+  I + IA  + E    +
Sbjct: 303 YAKSGITSAAVLGIGRAIGETMAVLMVTGNAAVIPHTLLEPVRTIPATIAAELGEVSAGS 362

Query: 241 ILYAMLTMLGVIF 253
             Y  L MLGVI 
Sbjct: 363 GHYQALFMLGVIL 375


>gi|226362541|ref|YP_002780319.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226241026|dbj|BAH51374.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 276

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 10/147 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +G    ++    P    L + P  V  PL+V        +    +++L IF   
Sbjct: 99  VPIGLLLGSNRRLNHAFDPIINALYSTPILVLTPLLVIWFGLGMGSKIANVAILAIF--- 155

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N+I G           A SF  +G   ++ +  P + P+++TG   A G    A 
Sbjct: 156 -PVIINMIEGVRTVDPVLLRAARSFGASGLSIYKDVTFPSVIPFFITGVRLAIGKGMIAV 214

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTE 548
           +V E  +       T G+G  I    E
Sbjct: 215 VVGEYIA------ATEGIGYRIRADAE 235



 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            M I+L        L   +RRL     PI++ + S PIL      V++F     G  +G+
Sbjct: 90  GMAIALGLGVPIGLLLGSNRRLNHAFDPIINALYSTPILVLTPLLVIWF-----GLGMGS 144

Query: 135 ELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           ++A  AI AIF      +  +M + +  +   L   +RSF  SG   +  +  P  +P  
Sbjct: 145 KIANVAILAIFP-----VIINMIEGVRTVDPVLLRAARSFGASGLSIYKDVTFPSVIPFF 199

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +  + +++  G   VV  E I   + +
Sbjct: 200 ITGVRLAIGKGMIAVVVGEYIAATEGI 226


>gi|218690278|ref|YP_002398490.1| putative ABC transporter permease [Escherichia coli ED1a]
 gi|218427842|emb|CAR08755.2| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli ED1a]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GKVIGAELA---AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK+  A +    A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGIGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|84515313|ref|ZP_01002675.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
 gi|84510596|gb|EAQ07051.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
          Length = 277

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 14/135 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +LSA V+ +         AA   +L   +VP+LD+MQ++P   +L   +V+F + + PG 
Sbjct: 100 VLSACVVCMGVGVPIGIAAAHRPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 159

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +     A +  +  + +  +T   Y  + + P  L E +++F  +  Q  + + +P + P
Sbjct: 160 I-----ATVIFVLPAPI-RLT---YLGVASTPTALLEAAQAFGATKRQILFKVELPSATP 210

Query: 191 ----GLVWNMMMSMS 201
               GL   +M+S+S
Sbjct: 211 QIMAGLNQTIMLSLS 225


>gi|56964647|ref|YP_176378.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus clausii KSM-K16]
 gi|56910890|dbj|BAD65417.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus clausii KSM-K16]
          Length = 265

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 14/143 (9%)

Query: 77  VISLLFTFVYATLAAK----SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           V+  L   V  TL A     S+RL  +L P L I+ S+P +      +V          +
Sbjct: 81  VLGFLLGTVAGTLLAALLWWSKRLAEILDPFLVILNSMPKVAIGPILIVG---------L 131

Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           G  + ++ A+     V   T  +Y +   +  +  +V ++F  S WQ+F ++  P ++P 
Sbjct: 132 GPNMTSVIAMGMLVSVIITTMVVYTAFKEVDGNYLKVLQTFSASKWQQFRHVVYPATIPV 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIV 214
           +V  + M++   W  V+  E +V
Sbjct: 192 IVSTLKMNVGLSWVGVIVGEFLV 214


>gi|311106606|ref|YP_003979459.1| binding-protein-dependent transporter inner membrane component
           family protein 39 [Achromobacter xylosoxidans A8]
 gi|310761295|gb|ADP16744.1| binding-protein-dependent transport system inner membrane component
           family protein 39 [Achromobacter xylosoxidans A8]
          Length = 257

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E      V+  +L++      +++F+   L
Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247


>gi|297544878|ref|YP_003677180.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842653|gb|ADH61169.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 299

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 93  SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +++LG  +L P ++I   IP  + G++  TV V F++ + G +  + LA I  +    + 
Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTVMTLP 167

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     ++ ++P ++ E S +   + WQ   ++ +P + PG++  +++ ++  +   +
Sbjct: 168 TITSVSTDAIKSLPVEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227

Query: 209 ASEMIVVGDTVIP 221
           A +M++    VIP
Sbjct: 228 AVQMVIGNRPVIP 240


>gi|239627742|ref|ZP_04670773.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517888|gb|EEQ57754.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 280

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 22/165 (13%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF-AIFTSQVWNMTF 152
           +R+ + + P+ D+++ +P + ++   +++F     G  +GA+ A IF + F   V N   
Sbjct: 115 KRIDLFVTPLFDLVRPVPTIAWIPLMILWF-----GIGLGAKAAIIFVSAFIPCVINSYA 169

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            + Q+    P  L  V+++F  S  +  + + +P +MP +   + +S+   W  + A+EM
Sbjct: 170 GIKQTK---PVHLW-VAQTFGASRTKMLFTVAIPTAMPLIFTGLRISLQAAWTTLCAAEM 225

Query: 213 IVVGDTVIPLPGIGSYIAL--AIKEQDLLAILYAMLTM--LGVIF 253
           +          G+G  I L  ++   DL  I+  MLT+  +G IF
Sbjct: 226 LAANK------GLGYMIQLNRSLARADL--IIVGMLTIGFIGTIF 262


>gi|126435145|ref|YP_001070836.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|126234945|gb|ABN98345.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 279

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      D  +VA S   +  +  R+I++P + P+ +TG   + G A   ++++E+ +  
Sbjct: 173 GVQEIDRDLLDVAKSLRASRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIAAS 232

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG YI  S+       V  G+ ++    +AL + L
Sbjct: 233 Q------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLL 269


>gi|330814338|ref|YP_004358577.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487433|gb|AEA81838.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Candidatus Pelagibacter sp. IMCC9063]
          Length = 278

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 18/144 (12%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+  ++ ++ ++LF  V        A++S     +L PILD+MQ+IP   +L   V+ 
Sbjct: 93  EETMTTMAMIITAVLFCSVIGIPIGIAASRSNLFEKILRPILDVMQTIPSFVYLIPVVML 152

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +      AI     + V  +T      L  + +  ++ +R+   + WQ  +
Sbjct: 153 FGIGITPGVI------AIIIFSIAPVIRLT---NLGLRQVEKRFKDAARALGCNKWQVLY 203

Query: 182 YLGVPFS----MPGLVWNMMMSMS 201
            + +P +    M G+   +M+S+S
Sbjct: 204 KIELPLALKTIMAGVNQTLMLSLS 227


>gi|282856693|ref|ZP_06265959.1| inner membrane protein [Pyramidobacter piscolens W5455]
 gi|282585458|gb|EFB90760.1| inner membrane protein [Pyramidobacter piscolens W5455]
          Length = 300

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 16/148 (10%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L++++I+L+       L + S     +L P+LD MQ++P+  +L   ++ F     G  
Sbjct: 103 VLASVMIALVIGIPIGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGT---GNA 159

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190
            G     I+A+    V  +T      +  + +++ E +R+F  + WQ  + + +P + P 
Sbjct: 160 SGVIATVIYAVV--PVIRLT---SLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPT 214

Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVV 215
              G+   +MM+M+     VV + MI V
Sbjct: 215 IMAGVNQTLMMAMA----MVVTTSMIGV 238


>gi|269215401|ref|ZP_06159255.1| putative ABC transporter transmembrane subunit, permease [Slackia
           exigua ATCC 700122]
 gi|269130888|gb|EEZ61963.1| putative ABC transporter transmembrane subunit, permease [Slackia
           exigua ATCC 700122]
          Length = 390

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/162 (20%), Positives = 76/162 (46%), Gaps = 14/162 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +  ++S       A L+  +R +   + P++ ++++IP++  +   +++        
Sbjct: 190 RIAAGFLLSFFVGISLALLSHHARIVRDFVEPVISLLRTIPVVSIIIMLLIW-------- 241

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            +G ++  ++  F   +  +  +M   L N+   + E++R +RL  W+ F Y+  P  MP
Sbjct: 242 -VGNQMLTVYLSFLIVLPIIYTNMLAGLENVDPRMLEMARCYRLGWWRTFMYVYRPAFMP 300

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            L  +  +S+   W   + +E++       P P IG  +A A
Sbjct: 301 FLKSSCRLSLGMSWKAGIMAEVLAT-----PKPSIGKEMAQA 337


>gi|289578658|ref|YP_003477285.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter italicus Ab9]
 gi|289528371|gb|ADD02723.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter italicus Ab9]
          Length = 299

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 93  SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +++LG  +L P ++I   IP  + G++  TV V F++ + G +  + LA I  +    + 
Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTVMTLP 167

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     ++ ++P ++ E S +   + WQ   ++ +P + PG++  +++ ++  +   +
Sbjct: 168 TITSVSTDAIKSLPVEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227

Query: 209 ASEMIVVGDTVIP 221
           A +M++    VIP
Sbjct: 228 AVQMVIGNRPVIP 240


>gi|148243573|ref|YP_001228730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. RCC307]
 gi|147851883|emb|CAK29377.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. RCC307]
          Length = 272

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 4/133 (3%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A+++ +P+GI +G  P I +  +P   +L   PA  F PL+   + Y  +     ++L+
Sbjct: 93  LATLVAVPLGICMGVYPAICALCEPLIAMLRYMPAAAFIPLL---IIYLGIGEEPKIALI 149

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            + GT ++ +  V+      P +  E   +    G +    ++     P  +        
Sbjct: 150 FL-GTVYFNVLMVMDAVKFVPKELIETTLTLGGRGRQVLVQVVARYSLPSIIDTLRINIA 208

Query: 516 GAWNASIVSEVAS 528
            +WN  +V+E+ +
Sbjct: 209 TSWNLVVVAELVA 221


>gi|121535084|ref|ZP_01666901.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus
           carboxydivorans Nor1]
 gi|121306334|gb|EAX47259.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus
           carboxydivorans Nor1]
          Length = 297

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 5/127 (3%)

Query: 96  LGMVLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           L  ++ P  D+  +IP  + GF+  TV V F+ +  G   G  L A   I    +     
Sbjct: 110 LRQIMRPATDLYVAIPSVVYGFVGLTVLVPFIRVQFGVNTGFGLLAAAVILAIMILPTII 169

Query: 153 SMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           S+ + ++  +PR LEE S +   + WQ    + +P ++PG++ +++++M+      +A +
Sbjct: 170 SISEDAIRAVPRALEEGSLALGATRWQTITGVILPAALPGILTSVILAMARAVGETMAVQ 229

Query: 212 MIVVGDT 218
           M V+G+T
Sbjct: 230 M-VIGNT 235


>gi|187924082|ref|YP_001895724.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187715276|gb|ACD16500.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 290

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A P  + EV+ +F  + W+  R +ILP   P   TG   A   +W A++ +E     
Sbjct: 176 GIHAVPRAYIEVSRAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 230

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  +G+G  + + +E+     V+ GV+++     ALN
Sbjct: 231 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVIGVTGWALN 270



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 13/174 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           ++  +L +  S +  R  S  VI  L   +  ++   SR    ++ P  D  + I +  +
Sbjct: 83  IESGALLKALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAW 142

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    V+F      KV+   LAA+  +        T      +  +PR   EVSR+FR S
Sbjct: 143 IPLISVWFGLGDVAKVVFLSLAALLPV--------TAHTCDGIHAVPRAYIEVSRAFRYS 194

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            WQ    + +P ++P +   + +++   W   + +E ++V  +     GIG+ +
Sbjct: 195 RWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGS-----GIGNTL 243


>gi|258512805|ref|YP_003186239.1| binding-protein-dependent transport systems inner membrane
           component [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479531|gb|ACV59850.1| binding-protein-dependent transport systems inner membrane
           component [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 260

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 8/169 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +VD   +      L  Y + +  R  S   I     F   TL   S++   +L   +
Sbjct: 42  PLGVVDAALMLARQGVLWTYIATSAARAFSGFFIGATVGFTLGTLNGISKKASRLLDTPI 101

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++++IP L  +   +V+F        IG E A +F +       M  + Y  + ++   
Sbjct: 102 QMIRTIPHLALVPLVIVWFG-------IG-EQAKVFLVALGTAIPMYMNTYFGIQSLDPG 153

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           L E++R +R S  + F  + +P ++P ++  +  S+   W  ++ +E I
Sbjct: 154 LLEMARVYRFSRLKMFGRVILPGALPSVLSGVRYSLGVMWVTLIVAETI 202


>gi|229822266|ref|YP_002883792.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229568179|gb|ACQ82030.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 317

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +T L  L+ + I+++    YA + ++S     VL P   I+Q+IPIL  +    ++   
Sbjct: 119 GQTVLVALAGLAIAVVLGLAYAVVMSQSVWAERVLYPYAVILQTIPILALVPLIGIWLGY 178

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +P +++   + A+F + ++ ++ +      S      DL  ++++ R   WQ+   L  
Sbjct: 179 GFPARIVVCVIIALFPMISNTLFGLL-----SASPAAHDLFTLNKATR---WQRLGKLQF 230

Query: 186 PFSMP 190
           P ++P
Sbjct: 231 PAALP 235


>gi|145512812|ref|XP_001442317.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409670|emb|CAK74920.1| unnamed protein product [Paramecium tetraurelia]
          Length = 486

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           Y+T A K++ L   +  ++D+M    IL  +   ++  +N Y   ++ AE    F  ++S
Sbjct: 82  YST-AFKNKELDKAIDAVVDVM----ILHVVRDNILGLLNAY---ILVAETYLKFTYYSS 133

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            +   T++    LC+I  D+EEV +SFRL 
Sbjct: 134 AI--QTYTQLLHLCDICNDVEEVQKSFRLK 161


>gi|254362671|ref|ZP_04978758.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           PHL213]
 gi|261493213|ref|ZP_05989740.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496542|ref|ZP_05992922.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|153094290|gb|EDN75154.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           PHL213]
 gi|261307745|gb|EEY09068.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311063|gb|EEY12239.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, membrane protein [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 287

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +E+A I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 145 PMRLLNSEIAIIIGLVYILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPL 204

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPG+V   ++ +  + G F+V  ++++  G T    P +G+ I       +  A+  A+
Sbjct: 205 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLVGNIIKSLFLNTNQFALGSAV 258

Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              LT+L  + LY  + +R   + + K  LE
Sbjct: 259 SIALTILMALMLY--VYYRANKLLNKKVELE 287


>gi|148544777|ref|YP_001272147.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri DSM 20016]
 gi|184154128|ref|YP_001842469.1| phosphate ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227363909|ref|ZP_03848013.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683116|ref|ZP_08162632.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
 gi|148531811|gb|ABQ83810.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225472|dbj|BAG25989.1| phosphate ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227071062|gb|EEI09381.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977466|gb|EGC14417.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
          Length = 299

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 18/173 (10%)

Query: 60  SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           +LP  A+  ++ +LS       A+V+++  T +  + A K       L P ++++  IP 
Sbjct: 76  ALPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129

Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + G++  TV+  +   ++ G   G  LAA   +F   +  MT     S   +P+     
Sbjct: 130 VVYGYVGLTVIVPFLRRIFGGTGFGI-LAATCVLFLMILPTMTSMTIDSFRAVPKQYRNA 188

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           S     + WQ    + +P +  G++  M+  M+  +   +A +M++   TV+P
Sbjct: 189 SAGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241


>gi|78063691|ref|YP_373599.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77971576|gb|ABB12955.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 321

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T   ML + V+S+        LA++S  L  +L+P+LD+MQ++P   +L   ++ F   
Sbjct: 95  QTLALMLVSTVLSVAIGVPVGILASRSAWLRRMLLPVLDVMQTLPSFVYLIPVLMLF--- 151

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GKV  A LA I       +      + Q    +  D+ E +R+F  + WQ    + +P
Sbjct: 152 GLGKV-PAILATIIYALPPLIRLTDLGIRQ----VDPDVTEAARAFGTTRWQLLVNVQLP 206

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            + P    G+    MM++S     VV + MI
Sbjct: 207 LARPSIMAGINQTTMMALS----MVVIASMI 233


>gi|257437832|ref|ZP_05613587.1| ABC transporter, permease protein, cysTW family [Faecalibacterium
           prausnitzii A2-165]
 gi|257199755|gb|EEU98039.1| ABC transporter, permease protein, cysTW family [Faecalibacterium
           prausnitzii A2-165]
          Length = 258

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 26/167 (15%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ +G+   H         I LG      V VL+  A+  W     W+       + + P
Sbjct: 55  WQRVGFSAGH---------ILLGFALGVVVSVLLAAAAERWA----WV------DTLLAP 95

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDF 479
             QL+ A P   F  L +  VS   L+  + +S LM+      +L++ +  G  +     
Sbjct: 96  VIQLVKATPVASFIILALVWVSGRSLS--ILISFLMVL----PVLYSAVRTGIESADVQL 149

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            E+A  FH+   R  + I LP I P +  G   A G  W + + +EV
Sbjct: 150 LEMAQVFHLPLARRVKAIWLPAILPAFRQGCSVALGICWKSGVAAEV 196


>gi|258404898|ref|YP_003197640.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257797125|gb|ACV68062.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 222

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSL 454
           IA++I +PVGI I     ++ ++   A +    P+   F L++  +S + H    +   +
Sbjct: 31  IATVIGVPVGILITKYETLAKRVINAANIFMTIPSIALFGLMLPMLSLFGHGLGKVPAVI 90

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            ++  +Q  I+ N        P           ++ W+  + + LP   P  + G  TA 
Sbjct: 91  ALVLYSQLPIIRNTYVAIKNVPPAVVNAGRGMGMSNWQLLKEVELPIAIPVILAGLRTAA 150

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573
               N  I + +A++    +   GLG YI +  ++     +V G +++  F + ++  + 
Sbjct: 151 --VMNIGI-AAIATF----VGAGGLGVYIQQGIDRVYDEMIVAGAILVSVFAIVVDGGMA 203

Query: 574 --WHPLYLYGTRCLR 586
              H L   G +  R
Sbjct: 204 GIEHALTPKGLKIQR 218


>gi|256851607|ref|ZP_05556995.1| maltose ABC transporter permease [Lactobacillus jensenii 27-2-CHN]
 gi|260661676|ref|ZP_05862588.1| maltose ABC transporter permease [Lactobacillus jensenii 115-3-CHN]
 gi|282934295|ref|ZP_06339568.1| maltose ABC transporter, permease protein [Lactobacillus jensenii
           208-1]
 gi|297205214|ref|ZP_06922610.1| maltose/maltodextrin ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus jensenii
           JV-V16]
 gi|256615565|gb|EEU20754.1| maltose ABC transporter permease [Lactobacillus jensenii 27-2-CHN]
 gi|260547733|gb|EEX23711.1| maltose ABC transporter permease [Lactobacillus jensenii 115-3-CHN]
 gi|281301646|gb|EFA93917.1| maltose ABC transporter, permease protein [Lactobacillus jensenii
           208-1]
 gi|297149792|gb|EFH30089.1| maltose/maltodextrin ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus jensenii
           JV-V16]
          Length = 285

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            IPR ++E +     + WQ FW +G+P S P +V+  + +  G W   + S +I+
Sbjct: 165 TIPRAIDEAAEIDGATKWQVFWNIGLPLSRPMIVYTALTAFIGPWVDFIFSGIIL 219


>gi|239625202|ref|ZP_04668233.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519432|gb|EEQ59298.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 260

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A  F IF +   N+T + +     +   L   +R    S  Q F  + +P S+P + 
Sbjct: 126 GESAKYFLIFLAAFSNVTLNAWAGAKAMDYKLVGTARMLGASRTQIFLTVVMPSSVPQIF 185

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++MS  W  VVA+EM+   +      G+G  I   +   D++ IL  ++  +G++ 
Sbjct: 186 AGLQIAMSSSWATVVAAEMVRSSE------GVGWIITTGMNNNDIVQILVGIMA-IGIVG 238

Query: 254 LYDQLLFRPM 263
               ++ R +
Sbjct: 239 FVLAVIMRKL 248


>gi|220932982|ref|YP_002509890.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219994292|gb|ACL70895.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 272

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 21/155 (13%)

Query: 69  TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126
           TL M L++ +++L    +   LAA++  +  ++ P+LD MQ++P   +L   V++F M +
Sbjct: 90  TLSMILTSGIVALSVGVLMGILAARNDYVDRIIRPVLDFMQTMPSFVYLIPAVIFFGMEM 149

Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            PG +       IF++  + ++ N+       +  + +++ E +R+F  +  Q  + + +
Sbjct: 150 VPGVI----ATVIFSMPPAIRLTNL------GIRQVDKEVIEAARAFGSTPKQILFKVQL 199

Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           P ++P    G+   +M+S+S     VV + MI  G
Sbjct: 200 PLAVPTIMAGINQTIMLSLS----MVVIASMIGAG 230


>gi|317403097|gb|EFV83629.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 251

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 158 TPWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 211

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           E      V+  +L++      +++F+   L     R LR
Sbjct: 212 EIADMTGVMTNILVIAVLAALIDQFVLENLK---HRLLR 247


>gi|255318460|ref|ZP_05359693.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter radioresistens SK82]
 gi|262378690|ref|ZP_06071847.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
 gi|255304452|gb|EET83636.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter radioresistens SK82]
 gi|262299975|gb|EEY87887.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
          Length = 314

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 33/197 (16%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP------- 448
           I+S+I IP+GI  GF   +S   +PF +     PA  F  L V+ +              
Sbjct: 132 ISSLIGIPLGILCGFSNKLSQLTEPFIEFFRYLPAPAFGALAVAILGINDAPKIAIIVIG 191

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L+  +L+I  T   +  ++I   + F     ++ S FH         +++P   P    
Sbjct: 192 TLFQQILIIANTTRLVDRSLI--EAGFTLGTNKIKSLFH---------VVIPAAMPEIYR 240

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMC 563
                 G AW   IV+E+         T+G+  +I +     +F  V     ++GV+ + 
Sbjct: 241 NLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVIGLL 294

Query: 564 CFV----LALNRFLWHP 576
           C V    L    F W P
Sbjct: 295 CDVILMKLGQRLFKWKP 311


>gi|296128154|ref|YP_003635404.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296019969|gb|ADG73205.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 261

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R  V ++++ +I I  G  IG  P + + ++P   +L  F A     LV   +    
Sbjct: 64  SLGRFAVGVLLSIVIGIVAGTAIGATPWLRALLEP---MLEFFRAIPPVVLVPVLMLLLG 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++ ++ L+++ + G+ W +L N + G         + + S+ + G   +RY++LP   P 
Sbjct: 121 IDDSMKLAVI-VSGSVWPVLLNTVEGVRGTDPVLVDTSRSYRVRGLLAYRYVVLPAASPQ 179

Query: 506 YVTG 509
            + G
Sbjct: 180 IMAG 183


>gi|254449529|ref|ZP_05062966.1| ABC transporter, permease protein [Octadecabacter antarcticus 238]
 gi|198263935|gb|EDY88205.1| ABC transporter, permease protein [Octadecabacter antarcticus 238]
          Length = 315

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164
           P +G   + V +F    P    +IG    A +AI  +  W  T F M      L +IP  
Sbjct: 150 PQIGLFNYVVAFFTGADPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 209

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + E +   R S W++FW + +P ++P L+
Sbjct: 210 IYEAAECDRASKWRQFWTITIPMALPFLM 238


>gi|172064073|ref|YP_001811724.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171996590|gb|ACB67508.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 255

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|329924498|ref|ZP_08279578.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328940635|gb|EGG36954.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 218

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P   +++++P+L  +   +++F      K++   L A F I+ +         +  + 
Sbjct: 57  LDPSFQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYVNA--------FLGIR 108

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           ++   L EVSR F+ S  Q    L VP ++P ++  + +S+   W  +V +EM+
Sbjct: 109 SVDAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMM 162


>gi|296125208|ref|YP_003632460.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira
           murdochii DSM 12563]
 gi|296017024|gb|ADG70261.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 264

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 16/208 (7%)

Query: 368 VNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +NH   Q  +    LG   I++FRV+    I ++  I +GI +G   ++ + ++PF ++ 
Sbjct: 56  INHNIGQQTI----LGHVLISIFRVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVF 111

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P+ +       + P ++   ++  GT   +  N  AG+S         A  
Sbjct: 112 RQIPPIAWIPMAILWFGIGEV-PKIF---IIFIGTFVNVTLNAYAGSSQVNPTLIGAAKM 167

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                   + ++ILP   P    G       +W   + +E+ S         G+G  I  
Sbjct: 168 LGSNDRDIFLHVILPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIR 221

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++  + P+V+ G++ +    L L+  +
Sbjct: 222 GSDTANIPQVLAGMITIGIVGLLLSSLM 249



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 15/191 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L+   I  +   +       ++ +  V+ P  ++ + IP + ++   +++F       
Sbjct: 75  RVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAILWFG------ 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            IG E+  IF IF     N+T + Y     +   L   ++    +    F ++ +P S+P
Sbjct: 129 -IG-EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVILPASVP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   M +  S  W  V+A+EM      V    G+G  I       ++  +L  M+T +G
Sbjct: 187 QIFNGMQVGFSVSWMGVLAAEM------VSSFAGVGWVIIRGSDTANIPQVLAGMIT-IG 239

Query: 251 VIFLYDQLLFR 261
           ++ L    L R
Sbjct: 240 IVGLLLSSLMR 250


>gi|254449487|ref|ZP_05062924.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198263893|gb|EDY88163.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 345

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R+  +++PILD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 178 ARSDRVQRIMIPILDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 236

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +         D+ E + +F ++  QK   + +P ++P +       M+G    ++ S
Sbjct: 237 GIRLVDP------DVTEAADAFGMTKRQKLLNVQIPLALPNI-------MAGVNQTIMMS 283

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE 235
             +VV  +++  PG+G  +   I+ 
Sbjct: 284 LAMVVIASLVSAPGLGVLVLRGIRS 308


>gi|160941492|ref|ZP_02088826.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435576|gb|EDP13343.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC
           BAA-613]
          Length = 354

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 17/170 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP   ++   +V   +L+ G V    L + FA+        T +    + N+
Sbjct: 195 PVIKFLGPIPTATWIPIIMVVAASLFRGAVFIIALGSWFAV--------TVASMSGIQNV 246

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +D  E +R+   S  Q  + + +P +MP ++     +MS     ++ +EM+ V      
Sbjct: 247 DKDFFEAARTLGASEGQLVFRVAIPHAMPSILQGCTQAMSSSCVAIMIAEMMGVK----- 301

Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
             G+G Y+  A        + A L+ +  +  ++     L+ R ++ W N
Sbjct: 302 -AGLGWYMNWAKSWAAYDKMFAALFVICFIFTIVTKVLDLIKRRVLRWQN 350


>gi|303256366|ref|ZP_07342380.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|331001510|ref|ZP_08325128.1| putative aliphatic sulfonates transport permease protein SsuC
           [Parasutterella excrementihominis YIT 11859]
 gi|302859857|gb|EFL82934.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329568239|gb|EGG50056.1| putative aliphatic sulfonates transport permease protein SsuC
           [Parasutterella excrementihominis YIT 11859]
          Length = 259

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  NV +G       +KE+A    +     +++I  P   P   TG     G +W A + 
Sbjct: 141 IYLNVFSGFKQIDKSYKELAFMLRLNRMERFKHIEFPASLPNIFTGLRLGFGYSWRALVG 200

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +E+ +       ++GLG  I +++E     +V +G+L  C  VL +
Sbjct: 201 AELIA------ASSGLGYLIGDASEMSRTDKVFVGIL--CIAVLGV 238


>gi|209919589|ref|YP_002293673.1| putative glycine/betaine/choline ABC transporter permease
           [Escherichia coli SE11]
 gi|209912848|dbj|BAG77922.1| putative glycine/betaine/choline ABC transporter permease component
           [Escherichia coli SE11]
 gi|324015916|gb|EGB85135.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFQHVQLPLALP 310


>gi|170697510|ref|ZP_02888600.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170137533|gb|EDT05771.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 255

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  IF S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|163853131|ref|YP_001641174.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664736|gb|ABY32103.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 353

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y   P + + ++
Sbjct: 171 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             F  Q  ++ N             E A +      R  R +I+P + P          G
Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  +I +      F  V   +L++    +A +
Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335


>gi|329923189|ref|ZP_08278677.1| protein LplC [Paenibacillus sp. HGF5]
 gi|328941575|gb|EGG37863.1| protein LplC [Paenibacillus sp. HGF5]
          Length = 294

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           N+PR+LE+ SR      +   W + VP S+P L    + +M G W
Sbjct: 166 NLPRELEDASRIDGAGHFSTLWKIYVPLSLPALATTGLFTMVGHW 210


>gi|116696181|ref|YP_841757.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530680|emb|CAJ97027.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 281

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)

Query: 50  DIVPITLDVHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D+VP    +   P+   + S +  R+ +    + +   V      +SR L  +L+P L++
Sbjct: 65  DVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEV 124

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP + ++   ++ F +        +EL+ IF  F   ++ +  +    +      L 
Sbjct: 125 LRPIPGVAWIPLAILMFPS--------SELSMIFITFIGALFPILLNTIHGVERTDPRLV 176

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             +RS     W  F  + +P ++P +V  + + M   WF +V +EMI  G       GIG
Sbjct: 177 ATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMI-AGQY-----GIG 230

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            Y   A   Q+   I+  ML ++G   +    L + +  W
Sbjct: 231 YYTWEAYNLQNYADIVVGML-LIGAFGMGSSALIKRLGAW 269



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 448 PNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           P+  LS++ I   G  + IL N I G           A S     W  +  ++LP   P 
Sbjct: 142 PSSELSMIFITFIGALFPILLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPS 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG     G +W   + +E+ +  +      G+G Y  E+    ++ ++V+G+L++  F
Sbjct: 202 IVTGLAIGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAF 255


>gi|299534624|ref|ZP_07047956.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           fusiformis ZC1]
 gi|298729997|gb|EFI70540.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           fusiformis ZC1]
          Length = 264

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 14/184 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
            +T+   V+  +  +++   + + + + P +S  + P+  +L A P     P+++  +  
Sbjct: 73  SVTLMETVIGFLAGTLLGTLIAVVLWWSPLLSKVLDPYLVILNAMPKVALGPILIVALGP 132

Query: 443 -YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            Y+ +     L  ++I     Y  F  +      PN + +V  +F  T W+ +R +ILP 
Sbjct: 133 GYFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGATRWQIFREVILPA 186

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            FP  ++      G +W   IV      G   + + GLG  I    +  +F  V++ +LI
Sbjct: 187 SFPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLI 240

Query: 562 MCCF 565
           +  F
Sbjct: 241 IAFF 244


>gi|260856104|ref|YP_003229995.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|260868833|ref|YP_003235235.1| putative transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|257754753|dbj|BAI26255.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|257765189|dbj|BAI36684.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|323152357|gb|EFZ38646.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli EPECa14]
 gi|323176975|gb|EFZ62565.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1180]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|206564221|ref|YP_002234984.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198040261|emb|CAR56246.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 255

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121
           TL  L  + +S L   + A  A  A +R  G   +P+    +DI Q+ P +  L   V  
Sbjct: 62  TLAHLGTVALSSLIGTIVAVSAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L P  +I   L  +  +F S +          L ++PRD+ + +R   +SGWQ+  
Sbjct: 122 VGFGLKP-VLIALVLYGLLPVFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172

Query: 182 YLGVPFSMPGLVWNMMMSM 200
            + +P + P +V  + +++
Sbjct: 173 SVELPLAFPVIVNGIRLAV 191


>gi|124268598|ref|YP_001022602.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum
           PM1]
 gi|124261373|gb|ABM96367.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum
           PM1]
          Length = 280

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N   G  +     +++ + +  T W+  R++++P   PY++ G   A G +   ++V
Sbjct: 150 ILANTTIGLKSADARLRDLFTLYGATRWQRLRFLLVPSALPYFMAGLKVAGGLSLIGAVV 209

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +E  +      R TGL + I E++ +   P +   +L++    +A+
Sbjct: 210 AEFTA--GTAGRDTGLASRILEASFRTETPLMFAALLLVSLLGVAI 253


>gi|148270801|ref|YP_001245261.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
 gi|147736345|gb|ABQ47685.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
          Length = 283

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           L A+F++  S +W + F M      L NIP++L E +R    + WQ FWY+  P
Sbjct: 149 LNALFSVVLSGIWGVGFFMMMFITGLQNIPQELIEAARIDGANRWQTFWYVTFP 202


>gi|157156192|ref|YP_001463476.1| quaternary amine ABC transporter permease [Escherichia coli
           E24377A]
 gi|300818870|ref|ZP_07099075.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|157078222|gb|ABV17930.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E24377A]
 gi|300528489|gb|EFK49551.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|319783021|ref|YP_004142497.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168909|gb|ADV12447.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 283

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 18/175 (10%)

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPND 478
           PFA +L   P    FPL+       ++N      LL  +   ++ IL N   G ++   +
Sbjct: 116 PFAIVLQVTPIVAIFPLI-----NIYVNDQTTKLLLCAWIVAFFPILSNTTLGLNSVDRN 170

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +++      T W+  RY+ LP   PY++ G   A G +   ++V+E  +      +++G
Sbjct: 171 LRDMFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVA--GTTGQSSG 228

Query: 539 LGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL--WHPLYLYGTR 583
           L + I E+  + + P +        + G+LI     L  +  L  WH   L   R
Sbjct: 229 LASRIIEAGYRLNAPRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER 283


>gi|299529137|ref|ZP_07042585.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni S44]
 gi|298722893|gb|EFI63802.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni S44]
          Length = 414

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 28/171 (16%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQV 147
           L A S R      P+LD MQ+ P   +L   V+ F     G V G  +  +FA+    ++
Sbjct: 212 LLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI---GNVPGVIVTIVFALPPLIRL 268

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
            N+     +       DL E SR++  S  Q  W + +P +MP    G+   +M+S+S  
Sbjct: 269 TNLGIRQVRP------DLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLS-- 320

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              VV + MI VG       G+G  +   I   D+     A +  LG++ L
Sbjct: 321 --MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATVGGLGIVLL 359


>gi|218699260|ref|YP_002406889.1| putative ABC transporter permease [Escherichia coli IAI39]
 gi|218369246|emb|CAR17003.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli IAI39]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|169632054|ref|YP_001705790.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           baumannii SDF]
 gi|169150846|emb|CAO99449.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii]
          Length = 254

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 23/176 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            SR    +L   L ++++IP L  +   +++F           E A +F +     + + 
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPID 147

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W       
Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201

Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFR 261
           +++V +T+    GIG Y+ +  +E    D++ +   LYA+L  L  +    QLL R
Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLER 254



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIDINTYHGIRSVDPQLIEM 164

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S
Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS 210


>gi|251799432|ref|YP_003014163.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547058|gb|ACT04077.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 265

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 28/209 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   +   + +  GI +G        + P  Q++   P+    PL +      
Sbjct: 71  ISVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLFI------ 124

Query: 445 HLNPNLWLSL------LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                LW  +      L+I  + ++ L+ N   G     N   EVA     +  +    +
Sbjct: 125 -----LWFGIGEESKVLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRL 179

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   P  + GA  + G +W   +V+E+ +       T+G+G  ++++ +    P V +
Sbjct: 180 ILPAALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFV 233

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           G+ I       L  F    L L   R LR
Sbjct: 234 GIFIFAV----LGLFTDTLLALIERRLLR 258


>gi|116334430|ref|YP_795957.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099777|gb|ABJ64926.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 317

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 92  KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147
           + R+L   L P+++++  IP  + GF+   VV  +  +L  G   G  ++A F +F   +
Sbjct: 126 RGRKL---LQPVIELLVGIPSVVYGFIGLAVVVPFMRHLVGGSGFGI-ISATFVLFVMVL 181

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +T     SL ++PR  +E S +   + WQ    + +  + PG++  ++  M+  +   
Sbjct: 182 PTITSMTVDSLRSVPRYYKEASLALGATRWQTVSRVILRSATPGILTAVIFGMARAFGEA 241

Query: 208 VASEMIVVGDTVIP 221
           +A +M++    ++P
Sbjct: 242 LAVQMVIGNAAIMP 255


>gi|110806109|ref|YP_689629.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110615657|gb|ABF04324.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|333002845|gb|EGK22401.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-272]
 gi|333016849|gb|EGK36173.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-227]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|261208668|ref|ZP_05923105.1| phosphate ABC transporter [Enterococcus faecium TC 6]
 gi|289566074|ref|ZP_06446510.1| phosphate ABC transporter, permease PstC [Enterococcus faecium
           D344SRF]
 gi|260077170|gb|EEW64890.1| phosphate ABC transporter [Enterococcus faecium TC 6]
 gi|289162096|gb|EFD09960.1| phosphate ABC transporter, permease PstC [Enterococcus faecium
           D344SRF]
          Length = 306

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P+++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T   
Sbjct: 122 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 180

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++
Sbjct: 181 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 240

Query: 215 VGDTVIP 221
               ++P
Sbjct: 241 GNAALMP 247


>gi|110668537|ref|YP_658348.1| sulfonate ABC transporter permease [Haloquadratum walsbyi DSM
           16790]
 gi|109626284|emb|CAJ52742.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component; Sulfonate ABC transporter permease protein
           [Haloquadratum walsbyi DSM 16790]
          Length = 301

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 28/226 (12%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I  IT+ +  L    +++ L  L  +V+              S RL   L P+   ++ I
Sbjct: 95  IAGITVPMTRLTANLAQSLLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPI 154

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L ++ F +V+    + G        A F +     W   ++ Y  +  +   L+EV+ 
Sbjct: 155 PPLAWIVFAIVWIGIGHGG--------AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAA 206

Query: 171 SFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           S  +         + +P +MP +   +  S+   W  VVA+E+          PG+G  I
Sbjct: 207 SLGVDDDLTMIRKVIIPAAMPSITTGLRTSIGQCWMIVVAAELFGA-------PGVGFQI 259

Query: 230 ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
             A   Q+L   +  A + ++ ++FL    +FR         R+ER
Sbjct: 260 INA--AQNLATDVSVAYMVVISLVFLVSDGVFR---------RVER 294



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +++ S + + +G+ +G+   + + + P  + L   P   +    +  +   H       +
Sbjct: 120 LVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGHGG----AA 175

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAIT 512
            ++  G  W   +N  AG        KEVA+S  +       R +I+P   P   TG  T
Sbjct: 176 FIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPAAMPSITTGLRT 235

Query: 513 ACGGAWNASIVSE 525
           + G  W   + +E
Sbjct: 236 SIGQCWMIVVAAE 248


>gi|308176055|ref|YP_003915461.1| aliphatic sulfonates ABC transporter inner membrane subunit SsuC
           [Arthrobacter arilaitensis Re117]
 gi|307743518|emb|CBT74490.1| putative aliphatic sulfonates ABC transporter, inner membrane
           subunit SsuC [Arthrobacter arilaitensis Re117]
          Length = 275

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L       L    +  L   S+     L   +  ++++P L ++   V++     
Sbjct: 86  STQRVLLGFFFGSLLGLAFGALVGLSKLADAFLGLSISALRAVPSLAWVPLLVLWMKYGE 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV    + A F +FT+        +  +L ++   L E +RSF L G +    + +P 
Sbjct: 146 DSKVTLVIIGAFFPVFTT--------VALALRHVDAQLVEAARSFGLKGLKLLRTVQLPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213
            +P +   + ++++  W F+VA+E++
Sbjct: 198 VVPAIFSGLRLALAQAWLFLVAAELL 223


>gi|302349192|ref|YP_003816830.1| Putative sulfur reductase membrane-bound subunit, membrane anchor
           PsrC-like protein [Acidilobus saccharovorans 345-15]
 gi|302329604|gb|ADL19799.1| Putative sulfur reductase membrane-bound subunit, membrane anchor
           PsrC-like protein [Acidilobus saccharovorans 345-15]
          Length = 246

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 444 YHLNPNLW-LSLLMIFGTQWYILFNVIAGASAFP--------------NDFKEVASSFHI 488
           + + P  W L+LL++ G    ++  +++G SAFP                F ++A++  +
Sbjct: 95  HSVTPVAWSLALLILLGFSSRLVPILVSGLSAFPPLETSLIEGLNASRARFGDLAAALGL 154

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            G R   YI LP   PY+ +G+ +A G A   S V+E 
Sbjct: 155 RGLRRLAYIDLPASVPYFASGSRSALGVALIVSPVAEA 192


>gi|298292987|ref|YP_003694926.1| choline ABC transporter permease [Starkeya novella DSM 506]
 gi|296929498|gb|ADH90307.1| choline ABC transporter, permease protein [Starkeya novella DSM
           506]
          Length = 283

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PILD+MQ+IP   +L  T+V F     G V G     IFAI       +T   +  + ++
Sbjct: 131 PILDLMQTIPTFVYLIPTLVLFGL---GAVPGLISTVIFAI--PAPIRLT---HLGISSV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217
           P  L E  ++F  +  Q  + + +P+++P    G+   +M+S+S           +VV  
Sbjct: 183 PPALYEAGKAFGATKTQLLFKVELPYALPTIMAGVTQCIMLSLS-----------MVVIA 231

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            ++   G+G  +  A+   ++     A L ++ +  + D++  RP
Sbjct: 232 ALVGADGLGKPVVRALNSVNIAMGFEAGLAIVVLAIVLDRVCKRP 276


>gi|317154923|ref|YP_004122971.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316945174|gb|ADU64225.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 279

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 55/247 (22%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQ--------------SIGYIVNHF---TYQDVLYVIW 381
           R + M  I W  ++  VAI  AW+               +  I++H    T    L  + 
Sbjct: 2   RRADMRRINWHGIMFCVAIAAAWELLSTLQIVSPRLFPPLSLILSHLIDLTVSGTLPQVL 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF-PANVFFPLVVSC 440
               T+ R++  +I AS++ +P+GIW G    +   I P  + L +  PA V  P +   
Sbjct: 62  --AQTLLRMLAGLIAASVVMVPLGIWAGRSQRLWLLISPTVESLRSLPPALVILPAM--- 116

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYI-----------LFNVIAGASAFPNDFKEVASSFHIT 489
                        LL+  G    I           L N + G  A P  F + A +   T
Sbjct: 117 -------------LLLGIGNSMKIFAVFFAAAFPLLLNTMDGVRAIPLMFIDTARTLR-T 162

Query: 490 GWRWWRY-IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           G R   + +++P   P   +G  +A   A+  +I++E+         T G+G ++ +S  
Sbjct: 163 GNRTMLFEVVVPAAAPGIFSGLKSAVPIAFIVAILAEMIGG------TDGIGHFLMKSQR 216

Query: 549 KGSFPEV 555
               P++
Sbjct: 217 SFDIPQM 223


>gi|260598007|ref|YP_003210578.1| putative osmoprotectant uptake system permease yehW [Cronobacter
           turicensis z3032]
 gi|260217184|emb|CBA31037.1| Putative osmoprotectant uptake system permease protein yehW
           [Cronobacter turicensis z3032]
          Length = 210

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +RR     + I ++  ++P L  L   +V         V+G  +  AI A+F + +  +
Sbjct: 46  AARRFAEYAMQIFNVGNTLPPLAVLALAMV---------VVGIGDKPAIVALFLASLLPI 96

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + Y  LC++P  L E +    ++  Q+ W + +P +     W +M+S
Sbjct: 97  VRNTYAGLCSVPGSLIEAANGIGMTKGQRLWQVELPNA-----WPVMLS 140


>gi|83951335|ref|ZP_00960067.1| amino acid ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83836341|gb|EAP75638.1| amino acid ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 346

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 76/154 (49%), Gaps = 22/154 (14%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L +KS R     +P+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ 
Sbjct: 178 LMSKSDRFQKWTIPVLDMLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLT 236

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204
           ++   +      + RD+ E + +F ++  QK + + +P ++P    G+   +MMS++   
Sbjct: 237 DLGIRL------VDRDVIEAADAFGMTRRQKLFGVEIPLALPNIMAGINQTIMMSLA--- 287

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                  M+V+  +++  PG+G  +   I+  +L
Sbjct: 288 -------MVVIA-SLVSAPGLGVLVLRGIRNLEL 313


>gi|331653557|ref|ZP_08354558.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M718]
 gi|331048406|gb|EGI20482.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M718]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|294501451|ref|YP_003565151.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus
           megaterium QM B1551]
 gi|294351388|gb|ADE71717.1| aliphatic sulfonates ABC transporter, permease protein SsuC
           [Bacillus megaterium QM B1551]
          Length = 284

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R  +   + + + +  G+ +GF       + P  Q+L   P     PL +    + 
Sbjct: 88  ISILRAAIGFAVGAGLGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      LL+  G  + I  N   G     +   +VA     + W+    +ILP   P
Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW   +V+E+         + G+G  I ++ +      V +G++I   
Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257


>gi|283785195|ref|YP_003365060.1| ABC transporter membrane protein [Citrobacter rodentium ICC168]
 gi|282948649|emb|CBG88240.1| putative ABC transporter membrane protein [Citrobacter rodentium
           ICC168]
          Length = 236

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 17/129 (13%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           S+M ++LL       L ++    G+   ++ I ++  ++P L  L   +V         +
Sbjct: 52  SSMFLALLVGIPSGILLSRPAAKGIAEYVMQIFNVGNTLPPLAVLALAMV---------I 102

Query: 132 IG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           IG  +  AI A+F + +  +  + Y  LC +P  L E ++   ++ WQ+   + +P +  
Sbjct: 103 IGIGDFPAIVALFLASLLPIVRNTYAGLCAVPASLTEAAKGIGMTRWQRLCQVELPNA-- 160

Query: 191 GLVWNMMMS 199
              W +M+S
Sbjct: 161 ---WPVMLS 166


>gi|257879886|ref|ZP_05659539.1| phosphate ABC transporter [Enterococcus faecium 1,230,933]
 gi|257882730|ref|ZP_05662383.1| phosphate ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884044|ref|ZP_05663697.1| phosphate ABC transporter [Enterococcus faecium 1,231,501]
 gi|257886816|ref|ZP_05666469.1| phosphate ABC transporter [Enterococcus faecium 1,141,733]
 gi|257890402|ref|ZP_05670055.1| phosphate ABC transporter [Enterococcus faecium 1,231,410]
 gi|257893009|ref|ZP_05672662.1| phosphate ABC transporter [Enterococcus faecium 1,231,408]
 gi|257895385|ref|ZP_05675038.1| phosphate ABC transporter [Enterococcus faecium Com12]
 gi|257897996|ref|ZP_05677649.1| phosphate ABC transporter [Enterococcus faecium Com15]
 gi|258616651|ref|ZP_05714421.1| phosphate ABC transporter, permease protein [Enterococcus faecium
           DO]
 gi|260559604|ref|ZP_05831784.1| phosphate ABC transporter [Enterococcus faecium C68]
 gi|293378254|ref|ZP_06624423.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium PC4.1]
 gi|293556393|ref|ZP_06674974.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1039]
 gi|293560381|ref|ZP_06676874.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1162]
 gi|293568699|ref|ZP_06680014.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1071]
 gi|293572402|ref|ZP_06683382.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E980]
 gi|294616274|ref|ZP_06696067.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1636]
 gi|294617606|ref|ZP_06697236.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1679]
 gi|294622346|ref|ZP_06701379.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium U0317]
 gi|257814114|gb|EEV42872.1| phosphate ABC transporter [Enterococcus faecium 1,230,933]
 gi|257818388|gb|EEV45716.1| phosphate ABC transporter [Enterococcus faecium 1,231,502]
 gi|257819882|gb|EEV47030.1| phosphate ABC transporter [Enterococcus faecium 1,231,501]
 gi|257822870|gb|EEV49802.1| phosphate ABC transporter [Enterococcus faecium 1,141,733]
 gi|257826762|gb|EEV53388.1| phosphate ABC transporter [Enterococcus faecium 1,231,410]
 gi|257829388|gb|EEV55995.1| phosphate ABC transporter [Enterococcus faecium 1,231,408]
 gi|257831950|gb|EEV58371.1| phosphate ABC transporter [Enterococcus faecium Com12]
 gi|257835908|gb|EEV60982.1| phosphate ABC transporter [Enterococcus faecium Com15]
 gi|260074272|gb|EEW62594.1| phosphate ABC transporter [Enterococcus faecium C68]
 gi|291588659|gb|EFF20492.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1071]
 gi|291590788|gb|EFF22504.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1636]
 gi|291596212|gb|EFF27475.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1679]
 gi|291598173|gb|EFF29272.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium U0317]
 gi|291601460|gb|EFF31731.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1039]
 gi|291605669|gb|EFF35110.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1162]
 gi|291607464|gb|EFF36806.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E980]
 gi|292643118|gb|EFF61259.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium PC4.1]
          Length = 306

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P+++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T   
Sbjct: 122 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 180

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++
Sbjct: 181 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 240

Query: 215 VGDTVIP 221
               ++P
Sbjct: 241 GNAALMP 247


>gi|257464644|ref|ZP_05629015.1| Fe3+ ABC transporter, permease [Actinobacillus minor 202]
 gi|257450304|gb|EEV24347.1| Fe3+ ABC transporter, permease [Actinobacillus minor 202]
          Length = 674

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S    L  I + LEE S + + S +  F ++ +P   P L+  ++ S       + A   
Sbjct: 564 SAMAGLAQIDKSLEEASLTLKGSAFDTFRFIVLPLLKPALLSALVTSFVRSMTTISAIIF 623

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDL-LAILYA---MLTMLGVIFLYDQLLFR 261
           +V  +T +      SYI   +++ D  LA+ Y    +L M+ VIF +++L++R
Sbjct: 624 LVTPNTQVAT----SYILSRVEDGDYGLAVAYGSTLILVMMAVIFGFNKLIYR 672


>gi|240948692|ref|ZP_04753064.1| Fe3+ ABC transporter, permease [Actinobacillus minor NM305]
 gi|240296908|gb|EER47486.1| Fe3+ ABC transporter, permease [Actinobacillus minor NM305]
          Length = 649

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S    L  I + LEE S + + S +  F ++ +P   P L+  ++ S       + A   
Sbjct: 539 SAMAGLAQIDKSLEEASLTLKGSAFDTFRFIVLPLLKPALLSALVTSFVRSMTTISAIIF 598

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDL-LAILYA---MLTMLGVIFLYDQLLFR 261
           +V  +T +      SYI   +++ D  LA+ Y    +L M+ VIF +++L++R
Sbjct: 599 LVTPNTQVAT----SYILSRVEDGDYGLAVAYGSTLILVMMAVIFGFNKLIYR 647


>gi|257064067|ref|YP_003143739.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256791720|gb|ACV22390.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 249

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 10/131 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  +A+ T L     + + +L  F+ A    +   L + L P++ I Q++P +   
Sbjct: 45  DWQLLAHHAATTLLEAAVGLALGVLLGFIVAVAMDRFETLYLALEPVVTISQTVPTIAIA 104

Query: 117 TFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              V++    L P  V+         I  +  + +T S+     ++  D+ ++ R+   S
Sbjct: 105 PLLVLWLGYGLLPKIVL---------IIVTTFFPITVSLVSGFKSVDPDVVDLMRTMNAS 155

Query: 176 GWQKFWYLGVP 186
            WQ F Y  +P
Sbjct: 156 RWQIFLYAKIP 166


>gi|157377368|ref|YP_001475968.1| putative permease [Shewanella sediminis HAW-EB3]
 gi|157319742|gb|ABV38840.1| putative permease [Shewanella sediminis HAW-EB3]
          Length = 299

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T+R LS + +  L   V       L A+S R   ++ PILD+MQ++P   +L   V  
Sbjct: 101 EDTMRTLSIITVCTLLAIVLGVPIGILMARSNRTQSLVTPILDVMQTMPAFVYLIPVV-- 158

Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            M L  GKV G     I+AI    ++ N+   +      + +++ E + ++  +  Q+  
Sbjct: 159 -MLLGIGKVPGVIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAYGANPMQRLM 211

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P ++  +  ++      VV + MI V        G+G  +  +I  Q     
Sbjct: 212 GVQLPLASPTIMAGINQTIMMALGMVVIASMIGV-------KGLGQPVLKSITNQYFTLG 264

Query: 242 LYAMLTMLGVIFLYDQ 257
           L+  L ++ +  ++D+
Sbjct: 265 LFNGLAIVALAIIFDR 280


>gi|110640185|ref|YP_680395.1| phosphate ABC transporter permease [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282866|gb|ABG61052.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 290

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           S  ++L  +P +L E S +   + WQ  WY  +P S+PG+V   ++++S
Sbjct: 160 STREALKTVPYNLREASLALGATKWQTIWYQILPASIPGIVTGAILAIS 208


>gi|17989144|ref|NP_541777.1| nitrate transport permease protein NRTB [Brucella melitensis bv. 1
           str. 16M]
 gi|265989786|ref|ZP_06102343.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993105|ref|ZP_06105662.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|17984995|gb|AAL54041.1| nitrate transport permease protein nrtb [Brucella melitensis bv. 1
           str. 16M]
 gi|262763975|gb|EEZ10007.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263000455|gb|EEZ13145.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
          Length = 284

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 233 GAQY----GVGSYILEARSLYDLEKLFAGVAILSVMGLI 267


>gi|28211070|ref|NP_782014.1| taurine transport system permease protein tauC [Clostridium tetani
           E88]
 gi|28203509|gb|AAO35951.1| taurine transport system permease protein tauC [Clostridium tetani
           E88]
          Length = 258

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 4/140 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+VV    A II  P+G+  G+   I + ++P  +     P   ++ L+V  +   +   
Sbjct: 70  RLVVAFFSAVIIATPLGLASGYNSKIRALLEPIIEFYRPLPPLAYYTLLVLWLGIEN-ES 128

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L  L  F     I  + ++       D+   A +     W+ + Y+I P   P   T
Sbjct: 129 KIALLFLACFAP---IYISCVSAVIKIKEDYINSAYTVGANKWQVFIYVIFPACLPDIFT 185

Query: 509 GAITACGGAWNASIVSEVAS 528
           G  TA G A+   + +E+ +
Sbjct: 186 GLRTALGVAYTTLVSAEMVA 205


>gi|54023117|ref|YP_117359.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
 gi|54014625|dbj|BAD55995.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
          Length = 282

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 16/152 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + I++++P L  +   + +F           EL  I  I  + V  M    Y  + N+ R
Sbjct: 124 MQILRAVPFLALVPLFIAWFGI--------DELYKILLIAVATVAPMYAYTYLGVRNVDR 175

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            + E +R F LSG +    + +P ++PG++  + + +S     ++A+E +   +      
Sbjct: 176 KMVEAARGFGLSGARLVREVVLPSALPGVLMALRVCLSISITGLIAAEQVGTRE------ 229

Query: 224 GIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253
           G+G  + LA +    D + +   +  +LG++F
Sbjct: 230 GVGYLVTLAQEYNRTDYMVLCVVLYALLGLVF 261


>gi|193062469|ref|ZP_03043564.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|194427116|ref|ZP_03059667.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|218695742|ref|YP_002403409.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli 55989]
 gi|260844737|ref|YP_003222515.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|300924495|ref|ZP_07140464.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301325240|ref|ZP_07218758.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|192932135|gb|EDV84734.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|194414737|gb|EDX31008.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|218352474|emb|CAU98251.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli 55989]
 gi|257759884|dbj|BAI31381.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|300419304|gb|EFK02615.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300847900|gb|EFK75660.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|320199724|gb|EFW74313.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli EC4100B]
 gi|323184246|gb|EFZ69623.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1357]
 gi|324118029|gb|EGC11928.1| inner membrane transport system [Escherichia coli E1167]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|330505546|ref|YP_004382415.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328919832|gb|AEB60663.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 264

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +L+             
Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADVAAR 244

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 245 GLERVWLRWHPAY 257


>gi|314922208|gb|EFS86039.1| ABC transporter, permease protein [Propionibacterium acnes
           HL001PA1]
 gi|314965290|gb|EFT09389.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA2]
 gi|314982446|gb|EFT26539.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA3]
 gi|315090563|gb|EFT62539.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA4]
 gi|315094050|gb|EFT66026.1| ABC transporter, permease protein [Propionibacterium acnes
           HL060PA1]
 gi|315104440|gb|EFT76416.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA2]
 gi|327329387|gb|EGE71147.1| ABC transporter, permease protein [Propionibacterium acnes
           HL103PA1]
          Length = 296

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F M QS  ++P +LEE +R    + WQ FW + VP   PGL   M+ ++   W
Sbjct: 175 FLMRQSFMSLPVELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227


>gi|300917031|ref|ZP_07133726.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300415706|gb|EFJ99016.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|170682890|ref|YP_001742994.1| quaternary amine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|170520608|gb|ACB18786.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli SMS-3-5]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|160875189|ref|YP_001554505.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS195]
 gi|160860711|gb|ABX49245.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS195]
 gi|315267385|gb|ADT94238.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS678]
          Length = 283

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 24/175 (13%)

Query: 69  TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M+ S++V   L    +   A +S R+  VL PILD MQ+ P   +L   V+ F    
Sbjct: 95  TLAMVFSSVVFCTLVGVPFGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLF---S 151

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G     IFA+    V   +  + Q    +  +L E + +F  +  Q    + +P 
Sbjct: 152 IGNTAGVLATIIFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPL 206

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           ++P    GL   +MMS+S     VV + MI  G       G+G+ + L +   D+
Sbjct: 207 ALPTIMAGLNQTIMMSLS----MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250


>gi|82543550|ref|YP_407497.1| transport system permease protein [Shigella boydii Sb227]
 gi|218554696|ref|YP_002387609.1| putative ABC transporter permease [Escherichia coli IAI1]
 gi|307311290|ref|ZP_07590934.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|81244961|gb|ABB65669.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|218361464|emb|CAQ99053.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli IAI1]
 gi|306908796|gb|EFN39293.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|315061441|gb|ADT75768.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|323377978|gb|ADX50246.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|332097550|gb|EGJ02530.1| inner membrane ABC transporter permease protein yehY [Shigella
           boydii 3594-74]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|30063577|ref|NP_837748.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56480048|ref|NP_708031.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30041830|gb|AAP17557.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56383599|gb|AAN43738.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|281601588|gb|ADA74572.1| putative transport system permease protein [Shigella flexneri
           2002017]
 gi|313651233|gb|EFS15631.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri 2a str. 2457T]
 gi|332755748|gb|EGJ86109.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-671]
 gi|332756384|gb|EGJ86735.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri 2747-71]
 gi|332765938|gb|EGJ96148.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
 gi|333016700|gb|EGK36029.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-304]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|194431453|ref|ZP_03063745.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|194420278|gb|EDX36355.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|332092646|gb|EGI97717.1| inner membrane ABC transporter permease protein yehY [Shigella
           dysenteriae 155-74]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|126174513|ref|YP_001050662.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS155]
 gi|153000552|ref|YP_001366233.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS185]
 gi|217973482|ref|YP_002358233.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS223]
 gi|304408624|ref|ZP_07390245.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS183]
 gi|307305453|ref|ZP_07585201.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica BA175]
 gi|125997718|gb|ABN61793.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS155]
 gi|151365170|gb|ABS08170.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS185]
 gi|217498617|gb|ACK46810.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS223]
 gi|304352445|gb|EFM16842.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS183]
 gi|306911756|gb|EFN42181.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica BA175]
          Length = 283

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 24/175 (13%)

Query: 69  TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TL M+ S++V   L    +   A +S R+  VL PILD MQ+ P   +L   V+ F    
Sbjct: 95  TLAMVFSSVVFCTLVGVPFGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLF---S 151

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G     IFA+    V   +  + Q    +  +L E + +F  +  Q    + +P 
Sbjct: 152 IGNTAGVLATIIFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPL 206

Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           ++P    GL   +MMS+S     VV + MI  G       G+G+ + L +   D+
Sbjct: 207 ALPTIMAGLNQTIMMSLS----MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250


>gi|320176633|gb|EFW51675.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           dysenteriae CDC 74-1112]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|319443191|ref|ZP_07992347.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Corynebacterium variabile DSM 44702]
          Length = 305

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +TT   ++ ++I+ +   V+A + A+S+R    L P    +Q IP+L  +     +F   
Sbjct: 111 QTTKIAMTGLLIAAVIGIVWAIVMAQSKRAETALFPYAVFLQCIPVLALVPLIGFWFGFG 170

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +  +V    L A+F + ++ ++ +     QS+    RDL  + +  RL+  +K   L +P
Sbjct: 171 FSARVFVCVLIALFPMVSNTLFGL-----QSVDPGMRDLFALHKPSRLTVLRK---LEMP 222

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP--LPGIGSYIA---LAIKEQDLLAI 241
            +MP +   + +  SGG   V A    +VGD       PGIG  +      ++  DL A 
Sbjct: 223 AAMPSIF--VGLRTSGGLAVVGA----IVGDFFFKQGTPGIGVLLDNYRSRLQSPDLFAA 276

Query: 242 LYAMLTMLGVI 252
           +  + ++LGV+
Sbjct: 277 II-LASLLGVV 286


>gi|260428433|ref|ZP_05782412.1| glycine betaine/proline ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260422925|gb|EEX16176.1| glycine betaine/proline ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 344

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S RL  VL P+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ N+
Sbjct: 176 SRSDRLQSVLTPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAVILYAIVPVVRLTNL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +         D+ E + +F ++  QK + + +P ++P    G+   +MMS++     
Sbjct: 235 GIRLVNP------DVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 284 -----MVVIA-SMVSAPGLGILVLRGIRNLEL 309


>gi|227552022|ref|ZP_03982071.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|314939588|ref|ZP_07846815.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a04]
 gi|314941214|ref|ZP_07848110.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133C]
 gi|314948622|ref|ZP_07851997.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0082]
 gi|314953353|ref|ZP_07856280.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133A]
 gi|314993431|ref|ZP_07858796.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133B]
 gi|314995780|ref|ZP_07860869.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a01]
 gi|227178775|gb|EEI59747.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|313590052|gb|EFR68897.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a01]
 gi|313592096|gb|EFR70941.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133B]
 gi|313594629|gb|EFR73474.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133A]
 gi|313599938|gb|EFR78781.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133C]
 gi|313641128|gb|EFS05708.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a04]
 gi|313644953|gb|EFS09533.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0082]
          Length = 316

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L P+++++  IP  + GF+  +V+  +  +++ G   G  LA  F +F   +  +T   
Sbjct: 132 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 190

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M++
Sbjct: 191 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 250

Query: 215 VGDTVIP 221
               ++P
Sbjct: 251 GNAALMP 257


>gi|239627741|ref|ZP_04670772.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517887|gb|EEQ57753.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 262

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L    ++ +   V       SR    ++ P+ ++++ IP + ++   +++F       
Sbjct: 73  RVLVGYTVAAVSGIVVGLSMGTSRYAEAIIKPLFELIRPIPPIAWIPLVILWFGV----- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               EL     IF     N+T + Y     +   L   +R    S    F  + +P S+P
Sbjct: 128 ---GELPKYAIIFIGSFTNITLNAYTGAQRVDPTLIGCARMLGTSDRDIFLRVILPSSLP 184

Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213
            +   M +++S  W  V+A+EM+
Sbjct: 185 QIFAGMQVALSTAWMAVLAAEMV 207


>gi|46580882|ref|YP_011690.1| phosphate ABC transporter permease PstC [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46450302|gb|AAS96950.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 295

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 38/233 (16%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFL--------- 116
           T L  L A+ + ++     A LA    R+   + P+++++Q++P  ++GF          
Sbjct: 76  TALSSLIAIPLGIMTAIYLAELAGP--RMRAYVKPLVEMLQALPSVVIGFFGMVIVAPWL 133

Query: 117 --TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             TF +   +N+    ++ A +A         V  +T     ++ ++P D+ E S +   
Sbjct: 134 QETFDIATGLNIANASIMLAFMA---------VPTITSIAEDAIYSVPNDMREASLALGA 184

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG-------- 224
           + WQ    + VP ++PG+   +++ M  S G   VV   ++V G   + LPG        
Sbjct: 185 THWQTIGRVVVPAALPGISTAVILGMARSIGETMVV---LMVAGGAAM-LPGSIFDPSRP 240

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           + + IA  + E    +  Y  L   G++  +  L F  +  W  + + +  T 
Sbjct: 241 MPASIAAEMAEAPFRSDHYHALFATGLVLFFFTLAFNALAAWIAEKKKQVGTA 293


>gi|193070489|ref|ZP_03051429.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|192956183|gb|EDV86646.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|323171781|gb|EFZ57425.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli LT-68]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|331683807|ref|ZP_08384403.1| putative transport system permease protein [Escherichia coli H299]
 gi|331078759|gb|EGI49961.1| putative transport system permease protein [Escherichia coli H299]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|301644147|ref|ZP_07244155.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|301077445|gb|EFK92251.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|293415414|ref|ZP_06658057.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|307138788|ref|ZP_07498144.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli H736]
 gi|331642753|ref|ZP_08343888.1| putative transport system permease protein [Escherichia coli H736]
 gi|291433062|gb|EFF06041.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|315615368|gb|EFU96000.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 3431]
 gi|331039551|gb|EGI11771.1| putative transport system permease protein [Escherichia coli H736]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|264677530|ref|YP_003277436.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni CNB-2]
 gi|262208042|gb|ACY32140.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni CNB-2]
          Length = 414

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 28/171 (16%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQV 147
           L A S R      P+LD MQ+ P   +L   V+ F     G V G  +  +FA+    ++
Sbjct: 212 LLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI---GNVPGVIVTIVFALPPLIRL 268

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203
            N+     +       DL E SR++  S  Q  W + +P +MP    G+   +M+S+S  
Sbjct: 269 TNLGIRQVRP------DLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLS-- 320

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              VV + MI VG       G+G  +   I   D+     A +  LG++ L
Sbjct: 321 --MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATVGGLGIVLL 359


>gi|254392834|ref|ZP_05008004.1| glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294811675|ref|ZP_06770318.1| Glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326440141|ref|ZP_08214875.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces clavuligerus ATCC
           27064]
 gi|197706491|gb|EDY52303.1| glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294324274|gb|EFG05917.1| Glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 598

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 73  LSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLY 127
           LS +++S L T V A      AA+SRR+  V+ P+LD MQ++P + +L   +++F + + 
Sbjct: 91  LSLVLVSTLSTLVIAVPLGVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGVGVV 150

Query: 128 PG 129
           PG
Sbjct: 151 PG 152


>gi|261407641|ref|YP_003243882.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284104|gb|ACX66075.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 269

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L P   +++++P+L  +   +++F      K++   L A F I+ +         +  +
Sbjct: 107 TLDPSFQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYVNT--------FLGI 158

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++   L EVSR F+ S  Q    L VP ++P ++  + +S+   W  +V +EM+
Sbjct: 159 RSVDAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMM 213


>gi|120601814|ref|YP_966214.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio vulgaris DP4]
 gi|120562043|gb|ABM27787.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Desulfovibrio vulgaris DP4]
 gi|311234575|gb|ADP87429.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio vulgaris RCH1]
          Length = 297

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 38/233 (16%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFL--------- 116
           T L  L A+ + ++     A LA    R+   + P+++++Q++P  ++GF          
Sbjct: 78  TALSSLIAIPLGIMTAIYLAELAGP--RMRAYVKPLVEMLQALPSVVIGFFGMVIVAPWL 135

Query: 117 --TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             TF +   +N+    ++ A +A         V  +T     ++ ++P D+ E S +   
Sbjct: 136 QETFDIATGLNIANASIMLAFMA---------VPTITSIAEDAIYSVPNDMREASLALGA 186

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG-------- 224
           + WQ    + VP ++PG+   +++ M  S G   VV   ++V G   + LPG        
Sbjct: 187 THWQTIGRVVVPAALPGISTAVILGMARSIGETMVV---LMVAGGAAM-LPGSIFDPSRP 242

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           + + IA  + E    +  Y  L   G++  +  L F  +  W  + + +  T 
Sbjct: 243 MPASIAAEMAEAPFRSDHYHALFATGLVLFFFTLAFNALAAWIAEKKKQVGTA 295


>gi|52143599|ref|YP_083231.1| sugar ABC transporter, permease [Bacillus cereus E33L]
 gi|51977068|gb|AAU18618.1| sugar ABC transporter, permease [Bacillus cereus E33L]
          Length = 277

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           TF + Q    +P++LEE +R    + +Q +WY+ +P + PGL+
Sbjct: 156 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 198


>gi|326331224|ref|ZP_08197518.1| glycine betaine/L-proline ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325950994|gb|EGD43040.1| glycine betaine/L-proline ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 303

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   V+V  ++A +I IP+GIW  F P + + ++P   L+   P  V+    +  + ++ 
Sbjct: 91  TTTSVLVATLVALVIGIPLGIWSAFSPPLRAALRPVLDLMQTLPVFVYL---LPTILFFG 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +     L   ++F     +    + G +    +  E A++F    W   R + LP
Sbjct: 148 VGDAPGLVATIVFALPPAVRLTQL-GINQVDAETVEAAAAFGAGRWEILREVQLP 201


>gi|296330400|ref|ZP_06872881.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675995|ref|YP_003867667.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152668|gb|EFG93536.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414239|gb|ADM39358.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 217

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+V+ ++          + ++    ++ +++I+Q++P L  L F   +   L  GKV 
Sbjct: 27  LIAVVLGIIVAVPLGVALTRMKKGAGAIIGVVNIVQTLPSLAILAF---FIPLLGVGKV- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                AI A+F   V  +  + Y  +  + ++L E  +   ++GW++   + +P ++P
Sbjct: 83  ----PAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIGMTGWEQIRLVEIPLAIP 136


>gi|305680057|ref|ZP_07402867.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
 gi|305660677|gb|EFM50174.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 354

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 137 AAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           AA  A+  + VW     M   +   L  IPRD+ E ++    + WQ+FW + +P   P L
Sbjct: 179 AARLAVIIADVWKTTPFMALLILAGLQMIPRDVYEAAKVDGANAWQQFWKITLPLVKPAL 238

Query: 193 V 193
           +
Sbjct: 239 M 239


>gi|170019552|ref|YP_001724506.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169754480|gb|ACA77179.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|83951782|ref|ZP_00960514.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83836788|gb|EAP76085.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 690

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 15/140 (10%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V+ PI D++Q+IP+  FL   +++F        IG E +A  AI    +  M     Q L
Sbjct: 532 VVRPICDMLQTIPLFVFLIPVLMFFQ-------IG-EFSAFLAICMYAIVPMIRYTRQGL 583

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            + P +L E + S   + WQ    +  P++ P ++  +  ++      + A  M+V+   
Sbjct: 584 VSTPDELIEAAISSGATSWQVMREVRAPYAAPTILLGLNQTI------LYAFAMLVI-AA 636

Query: 219 VIPLPGIGSYIALAIKEQDL 238
           ++   G+G  I LA+ + D+
Sbjct: 637 LVGTTGLGQSIFLALGQADV 656


>gi|188494903|ref|ZP_03002173.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
 gi|256022185|ref|ZP_05436050.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia sp. 4_1_40B]
 gi|312973620|ref|ZP_07787792.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1827-70]
 gi|188490102|gb|EDU65205.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
 gi|310332215|gb|EFP99450.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1827-70]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|323692543|ref|ZP_08106776.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum
           WAL-14673]
 gi|323503409|gb|EGB19238.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum
           WAL-14673]
          Length = 251

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 24/220 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ +L  +A+ T    LS +VISL+   +   +      +   L P+L + Q++P++   
Sbjct: 48  ELDTLGGHAAVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLYPVLVVTQTVPMIVLA 107

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++Y       K++   L   F I  S      FS    L  +  +   + RS+    
Sbjct: 108 PILIIYMGFGVAPKILTVVLMCFFPIAVS------FS--DGLAQVDEEYVHLVRSYGAGR 159

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+ +  + +P ++P L+  + +S +    + ++    VVG+ +    G+G Y+ L +K  
Sbjct: 160 WKTYRLVKIPAAVPSLLSGLKVSAT----YSISGA--VVGEWIGSQKGLGYYL-LRVKNS 212

Query: 237 DL--------LAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            +        L I++  L M G+I LY QL   P +   N
Sbjct: 213 YMLDKVFACVLVIIFLSLCMNGLIRLY-QLAALPYLHTKN 251


>gi|307941787|ref|ZP_07657141.1| glycine betaine/L-proline transport system permease protein ProW
           [Roseibium sp. TrichSKD4]
 gi|307774884|gb|EFO34091.1| glycine betaine/L-proline transport system permease protein ProW
           [Roseibium sp. TrichSKD4]
          Length = 302

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 25/172 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  ++ P+LD+MQ++P   +L   V+ F     GKV G     ++AI    ++ N
Sbjct: 133 ARSDRMQSIVNPVLDLMQTMPSFVYLIPVVMIF---GLGKVPGLIAIVVYAIPPIIRLTN 189

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           +   +  S      D+ E + +F  +  QK   + +P ++P    G+   +MM+++    
Sbjct: 190 LGIRLVDS------DVLEAADAFGSNSRQKLINVQLPLALPTIMAGINQTIMMALA---- 239

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 M+VV   +I + G+G  +  AI  Q     L   L ++ +  ++D+
Sbjct: 240 ------MVVVA-ALIGVKGLGQPVLNAIANQYFTMGLMNGLAIVAIAIIFDR 284


>gi|261339665|ref|ZP_05967523.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318491|gb|EFC57429.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 236

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +R +   ++ I ++  ++P L  L   +V         VIG  +  AI A+F + +  +
Sbjct: 71  AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDTPAIIALFLASLLPI 121

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + Y  LC++P  L E +    ++ WQ+   + +P +     W +M+S
Sbjct: 122 VRNTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNA-----WPVMLS 165


>gi|160902001|ref|YP_001567582.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160359645|gb|ABX31259.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 282

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 27/167 (16%)

Query: 53  PITLD-----VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRL--G 97
           P TLD     + ++P    R  L  L    + ++F  ++A+LAA        K R L   
Sbjct: 60  PATLDAYKYVIENVP--FPRYFLNSLIITALGIIFNVLFASLAAYPLARLEFKGRNLIFF 117

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           ++L+P++  +Q   I+ F+T   +   N Y   V+ + ++ IF IF          M Q+
Sbjct: 118 LILLPMMIPIQGGLIVNFITILNLKLFNTYLAVVLPSAVS-IFGIFI---------MRQN 167

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              IPRDLE+ +R    + +Q +  +  P   P      ++S +G W
Sbjct: 168 YLAIPRDLEDAARIDGCNEFQLWRKIMFPMVRPAATALSIISFAGFW 214


>gi|39935689|ref|NP_947965.1| sulfonate ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|39649542|emb|CAE28064.1| possible sulfonate transport system permease protein. Subunit of an
           ABC transporter [Rhodopseudomonas palustris CGA009]
          Length = 280

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA+E
Sbjct: 163 AIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAE 217


>gi|295095968|emb|CBK85058.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 236

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +R +   ++ I ++  ++P L  L   +V         VIG  +  AI A+F + +  +
Sbjct: 71  AARGIAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDKPAIIALFLASLLPI 121

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + Y  LC++P  L E +    ++ WQ+   + +P +     W +M+S
Sbjct: 122 VRNTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNA-----WPVMLS 165


>gi|222529175|ref|YP_002573057.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor bescii DSM 6725]
 gi|222456022|gb|ACM60284.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor bescii DSM 6725]
          Length = 264

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/206 (19%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT RM+   +ISLL   +      K   L   L P++   Q++P + +L F ++++    
Sbjct: 70  TTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRPLILGFQTLPSVCWLPFAILWYGL-- 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 +E A IF      ++++T ++   + N+     + +++   +G + +  + +P 
Sbjct: 128 ------SEKAIIFVTAIGSLFSITLAVESGIKNVNPLYIKAAKTMGATGLRLYLNVIIPA 181

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P     ++  M  GW F  A   ++ G+ +    G+G  + +     D+  ++  M+ 
Sbjct: 182 SLP----YVISGMKQGWSF--AFRALMAGEMLFATKGLGQVLMVGRDLADMSQVISVMIV 235

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLE 273
            +    + ++ +F P+    N+ RL 
Sbjct: 236 TIVFGLVVEKAIFGPL---ENQIRLR 258


>gi|153870080|ref|ZP_01999553.1| Phosphate ABC transporter, permease protein PstC [Beggiatoa sp. PS]
 gi|152073453|gb|EDN70446.1| Phosphate ABC transporter, permease protein PstC [Beggiatoa sp. PS]
          Length = 460

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 15/167 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLT-FTVVYFM 124
           +++ ML A+ I L+     +  A+ S R   V  P+L+I+  IP  + GF    TV  F+
Sbjct: 239 SSIAMLVAVPIGLMSAIYLSEYASSSFR--AVAKPVLEILAGIPTVVYGFFAALTVAPFI 296

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCN-----IPRDLEEVSRSFRLSGWQ 178
             + G+ IG ++A+  A+ T  V   M      SL +     +P+ L + S S  ++  +
Sbjct: 297 RHW-GETIGLDVASESALATGLVMGIMIIPFVSSLSDDVISMVPQSLRDGSYSLGVTQSE 355

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS---GGWFFVVASEMIVVGDTVIPL 222
               + +P ++PG++  ++++ S   G    VV +  +    TV PL
Sbjct: 356 TIRLVVIPAALPGIIGGILLAFSRAIGETMIVVMAAGLSANLTVNPL 402


>gi|148258812|ref|YP_001243397.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146410985|gb|ABQ39491.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 282

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   + P +  +++IP + ++   +++       KV    +   F ++         
Sbjct: 112 ARRL---VDPTIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 160

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +  ++ ++ R + EV R FRLSG      + +P  +P  V ++ + +  GW FVVA+E
Sbjct: 161 GLTGAILSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAAE 219


>gi|52352353|gb|AAU43643.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transporter
           [uncultured archaeon GZfos23H7]
          Length = 176

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 12/165 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILF 466
           +G +  ++    P   LL   P   + PL++  +    L P     + +IF   ++ +L+
Sbjct: 1   MGSKEFVNKSFHPIFSLLYPIPVLGWAPLLMVWIGINELLP-----VALIFLCSFFPVLY 55

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G      +  + A +   +  +    ++LP   P   TG     G AW   I +E+
Sbjct: 56  NTITGIKGVDREVIKAARTLGASDMKILTTVVLPLAIPNIFTGLRLEAGMAWRVVIAAEM 115

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +        TG+GA +  S        +++ ++++    LA  R
Sbjct: 116 VAI------PTGIGALMIRSESLLRMDVIIVCLMVLSVMCLAFER 154


>gi|187732817|ref|YP_001879541.1| ABC transporter quaternary amine uptake (QAT) family, permease
           [Shigella boydii CDC 3083-94]
 gi|187429809|gb|ACD09083.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella boydii CDC 3083-94]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|300936556|ref|ZP_07151465.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300458319|gb|EFK21812.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|284922116|emb|CBG35197.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|157145835|ref|YP_001453154.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895]
 gi|157083040|gb|ABV12718.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895]
          Length = 236

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++ AIFA+F + +  +  + Y  LC++P  L E +    ++ WQ+   + +P + P
Sbjct: 106 GDVPAIFALFLASLLPVVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWP 162


>gi|226944345|ref|YP_002799418.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
 gi|226719272|gb|ACO78443.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
          Length = 277

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 16/166 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW-NMT 151
           SRR+   L+P+   +  +P+LG++   ++         ++G +    + +    V   +T
Sbjct: 110 SRRVEAYLLPLFQAISQVPVLGWIPLLMM---------LVGIDETLKYLVIAKAVLVPLT 160

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +  + NIP    EV+R +R     +   + +P ++P +   +  +++ GW  +V  E
Sbjct: 161 INTFSGIRNIPPSYLEVARVYRFGLLLRLRRVILPAALPSIFTGVRFALTKGWIALVTVE 220

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++   +      GIG  +    +   L  ++ AML +  V  + DQ
Sbjct: 221 LLASSE------GIGYLMVDGRQMFQLDLVIVAMLVIGLVGLVLDQ 260


>gi|325272391|ref|ZP_08138786.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324102468|gb|EGB99919.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 265

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKGG 264


>gi|293410491|ref|ZP_06654067.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291470959|gb|EFF13443.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 385

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|23099773|ref|NP_693239.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22778003|dbj|BAC14274.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 266

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  +   T L  +   +I  +   + ATL   SRR   V+ P L IM ++P +      
Sbjct: 68  SLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPIL 127

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V    L PG      L+ I   F   V   T  +Y +   +  + ++V  SF  + WQ 
Sbjct: 128 IV---ALGPGY-----LSIIAMGFIISVIVTTLVVYSAFNEVDPNYQKVMLSFGATRWQC 179

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           F     P ++P ++  + +++   W  V+  E +V
Sbjct: 180 FKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLV 214


>gi|320178923|gb|EFW53886.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           boydii ATCC 9905]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|256784385|ref|ZP_05522816.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
 gi|289768264|ref|ZP_06527642.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
 gi|289698463|gb|EFD65892.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
          Length = 303

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I  P+G+ +     + + I P    L + P+  + P     V +  LN N  +  ++
Sbjct: 115 ALVIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 170

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   +++G       F     +   TG R   +I+LP   P YV G       
Sbjct: 171 LLGAVPSIANGLVSGVDQVSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAF 230

Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +W + + +E +AS+  + +   GLG  +           V   +L++    +A++  ++ 
Sbjct: 231 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFS 287

Query: 576 PL 577
           PL
Sbjct: 288 PL 289


>gi|218705659|ref|YP_002413178.1| putative ABC transporter permease [Escherichia coli UMN026]
 gi|293405598|ref|ZP_06649590.1| ABC transporter [Escherichia coli FVEC1412]
 gi|298381281|ref|ZP_06990880.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300901252|ref|ZP_07119353.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|218432756|emb|CAR13650.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli UMN026]
 gi|291427806|gb|EFF00833.1| ABC transporter [Escherichia coli FVEC1412]
 gi|298278723|gb|EFI20237.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300355326|gb|EFJ71196.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|331699980|ref|YP_004336219.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954669|gb|AEA28366.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 270

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 14/199 (7%)

Query: 368 VNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +     Q VL+  IW    +++R++V ++IA ++ +  G+ IG    + +  +P  Q L 
Sbjct: 65  IGALAAQGVLFPDIW---TSLWRLLVGLLIAVVLGVVTGLAIGTWQSLETASRPVFQFLR 121

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + P+ +         P  +L   +     W I+ N  AG  +    F   A S 
Sbjct: 122 MVSPLSWAPVAIGLFGIGD-RPVFFL---VAAAAVWPIVLNTAAGVRSIDQGFLLAARSL 177

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T       ++LP I P+ +TG   A G  W   + +E+         T+GLG  I  S
Sbjct: 178 GATPAETLTSVVLPAIRPHVLTGLRLALGIGWVVLVPAEMLG------VTSGLGYEILNS 231

Query: 547 TEKGSFPEVVLGVLIMCCF 565
            ++ ++ +V+  +L++   
Sbjct: 232 RDQLAYDKVMAVILVIGLL 250


>gi|331663626|ref|ZP_08364536.1| putative transport system permease protein [Escherichia coli TA143]
 gi|331059425|gb|EGI31402.1| putative transport system permease protein [Escherichia coli TA143]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|256017702|ref|ZP_05431567.1| binding-protein-dependent transport systems inner membrane
           component [Shigella sp. D9]
 gi|332278717|ref|ZP_08391130.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332101069|gb|EGJ04415.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|257057391|ref|YP_003135223.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256587263|gb|ACU98396.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 273

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 73/190 (38%), Gaps = 19/190 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA++I + +G  +G        I P    + A P     P+ +          N    + 
Sbjct: 82  IATVIGVALGTALGRSQTALDYIGPLLSFMRAVPPPALVPVFMVLFGI----DNTMKVVT 137

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++FG  W I+ N I G  +     +E A SF      W   ++LP   P    G   +  
Sbjct: 138 IVFGVIWPIILNTIDGVRSVGPLQQETARSFRTPRHYWITMVVLPAAMPKIFAGLRLSLS 197

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-----VVLGVL--IMCCFVLA 568
            A    +++E+         T G+G  +  + +   F       V+LGVL   +   +LA
Sbjct: 198 LALILMVIAEMVG------TTNGIGFQLISAQQSFEFATMWTWIVLLGVLGYGLNTLLLA 251

Query: 569 LNR--FLWHP 576
           L R   +W P
Sbjct: 252 LERRVLVWQP 261


>gi|228914447|ref|ZP_04078057.1| Sugar ABC transporter, permease protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845158|gb|EEM90199.1| Sugar ABC transporter, permease protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 264

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           TF + Q    +P++LEE +R    + +Q +WY+ +P + PGL+
Sbjct: 143 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 185


>gi|163744407|ref|ZP_02151767.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161381225|gb|EDQ05634.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 268

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 24/158 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y      A +A  F  FT  V     + Y
Sbjct: 111 LVPLVAAIFPIPKIALLPLFVIWFGIDEMSKY------ALIA--FGTFTPTV----VATY 158

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF L  W     + VP +MPG++  + +S++     +VA+EM+  
Sbjct: 159 AAVDNVDRVLIRMGQSFGLGWWSIVSKIVVPGAMPGILSGLRISLTIAIILLVAAEML-- 216

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251
           G       GIG+YI  A    DL  +     +L++LGV
Sbjct: 217 GAEY----GIGAYILQAGSLYDLERLFAGVVILSLLGV 250


>gi|191165353|ref|ZP_03027195.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|293446481|ref|ZP_06662903.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|300821766|ref|ZP_07101911.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|309793008|ref|ZP_07687436.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331668829|ref|ZP_08369677.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331678079|ref|ZP_08378754.1| putative transport system permease protein [Escherichia coli H591]
 gi|190904516|gb|EDV64223.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|291323311|gb|EFE62739.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|300525608|gb|EFK46677.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|308123294|gb|EFO60556.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|323944947|gb|EGB41012.1| inner membrane transport system [Escherichia coli H120]
 gi|331064023|gb|EGI35934.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331074539|gb|EGI45859.1| putative transport system permease protein [Escherichia coli H591]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|327439410|dbj|BAK15775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 253

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           VL P++ +++ +  + +  F V++F        IG  + AI  IF +  + +  S   S+
Sbjct: 92  VLDPVVQVLRPVSPIAWSPFIVLWFG-------IG-NMPAIVIIFIAAFFPVLLSTVSSV 143

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             + +    ++ +F +S ++    + +P S P +   + M++   W F+VA EM+
Sbjct: 144 KKVDKTYLRIASNFEMSTFETMRKIILPASFPMIANGLHMALGSAWIFLVAGEMV 198



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +L + ++        +  +AS+F ++ +   R IILP  FP    G   A G AW   + 
Sbjct: 135 VLLSTVSSVKKVDKTYLRIASNFEMSTFETMRKIILPASFPMIANGLHMALGSAWIFLVA 194

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            E+          +GLG  I ++    S   V+  ++++    L L++
Sbjct: 195 GEMVG------AQSGLGFLIVDARNSLSLDLVMACIVVIGVLGLLLDK 236


>gi|163792220|ref|ZP_02186197.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159181925|gb|EDP66434.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 271

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +P++  +  IP +  L   +++F    P KV    L   F            + + ++  
Sbjct: 116 LPVVSALFPIPKIALLPLLILWFGIGEPSKVATIALGTFF--------PTAIATFSAVDG 167

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +PR L  +++SF +   +  W + +P ++PG++    ++ S     VVA+EMI
Sbjct: 168 VPRSLIRMAQSFGVPAPRIVWSIVLPGALPGILAGFRITASIALILVVAAEMI 220


>gi|145594188|ref|YP_001158485.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145303525|gb|ABP54107.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 664

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 15/176 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q +  T    L A+ +SLLF      LA  S R   ++ P+LD+MQ++P   +L    + 
Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGVSDRFHRMITPVLDLMQTMPTFVYLAPLTLV 208

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+       IG   A I  +  +    +  + +  + ++P    E + SF  +  Q+   
Sbjct: 209 FL-------IGPASATIATLIYAMPPAIRITAH-GIRSVPAPPVEATDSFGATRRQRLTK 260

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +P S   +V  +  +       ++A+  +V    +I  PG+G  +  A++  D+
Sbjct: 261 ALLPLSKRTIVLGVNQT-------IMAALAMVTVAALIDAPGLGKTVIKALQTTDV 309


>gi|87301750|ref|ZP_01084590.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701]
 gi|87283967|gb|EAQ75921.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701]
          Length = 248

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +G  P I   ++P   L+   PA  F PL+   + Y+ L   L   LL+  GT ++ 
Sbjct: 78  GIAMGSNPLICRLLEPLLGLIRYMPAPAFIPLL---IIYFGLG-ELPKVLLIFVGTFFFN 133

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
              ++      P +  E A +    G      ++ P I P  +         AWN  IV+
Sbjct: 134 TLMIMDAVKFVPPELIETALTLGGRGLPILTRVVAPFIAPQVIDAYRINMASAWNLVIVA 193

Query: 525 EVASWGHIHLRTTGLGAYIA 544
           E+ +         GLG  I+
Sbjct: 194 ELVA------ANEGLGKRIS 207


>gi|331673655|ref|ZP_08374418.1| putative transport system permease protein [Escherichia coli TA280]
 gi|331068928|gb|EGI40320.1| putative transport system permease protein [Escherichia coli TA280]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|306840616|ref|ZP_07473368.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306289354|gb|EFM60590.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 272

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       GIGSYI  A    DL  +    A+L+++G+I
Sbjct: 221 GAQY----GIGSYILEAGSLYDLEKLFAGVAILSVMGLI 255


>gi|301021104|ref|ZP_07185145.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300398285|gb|EFJ81823.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|159039787|ref|YP_001539040.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157918622|gb|ABW00050.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 282

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 6/142 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY- 443
           IT    V   +++++  + +GI +    H+     P    + A P     PL+V  VS+ 
Sbjct: 86  ITTVMTVQGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLV--VSFG 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +   P L +  L+ F   + I+ + + G +  P D  E+A S H + W+ +R +  P   
Sbjct: 144 WGTKPILIMVFLLCF---FPIVLSTVTGLTTTPADLAELARSLHASWWQSFRKVRFPAAL 200

Query: 504 PYYVTGAITACGGAWNASIVSE 525
           P    G   A   A   +++ E
Sbjct: 201 PQVFVGLKVAMPLAAIGAVIGE 222


>gi|15966454|ref|NP_386807.1| histidine transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307300509|ref|ZP_07580289.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307318374|ref|ZP_07597809.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15075725|emb|CAC47280.1| Histidine ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306896056|gb|EFN26807.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306904675|gb|EFN35259.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 285

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +T+ V  L     +T   ML A ++S++       L AKSR +  + +P+LD+MQ++P  
Sbjct: 81  VTVGVLGLWDLTMQTLALMLMATIVSVVIGVPMGILVAKSRVVRNITLPVLDVMQTMPSF 140

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   ++ F     GKV      AI A     V  +       +  +  ++ E + +F 
Sbjct: 141 VYLIPALMLF---GLGKV-----PAILATIIYAVPPLIRLTDLGIRQVDAEVVEAATAFG 192

Query: 174 LSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213
            S  Q  + + +P + P    GL   +MM++S     VV + MI
Sbjct: 193 GSPGQILFGVELPLATPTIMAGLNQTIMMALS----MVVVASMI 232


>gi|323702426|ref|ZP_08114090.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
 gi|323532565|gb|EGB22440.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
          Length = 255

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +RV+V + I+ ++ +P+G+  G    +   + P   L+   P  VF P+++      
Sbjct: 65  VSTYRVLVSLGISLLLAVPMGMVAGREEKLDRYLAPLIYLVYPIPKIVFLPILMILFGLG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    +S ++ F     IL      A     +      S   T    +R+++ P + P
Sbjct: 125 DVSKIALISFVLFF----QILVTTRDAARGINKEVITSVLSLGATRRDIYRHVVWPAVIP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             +T    A G A      +E  +         GLG Y+ ++    ++ E+  G++ M
Sbjct: 181 EVLTSLRIASGTAIAVLFFAETVA------SREGLGYYLLDAWSMYAYKEMFAGIIAM 232


>gi|91780826|ref|YP_556033.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693486|gb|ABE36683.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 298

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N   G ++  ++  ++   +  + W+  RY+ LP   PY++ G   + G +   ++V
Sbjct: 171 ILSNTTLGLNSADHNLADLFQLYKASRWQTLRYLRLPSAAPYFLAGVRISGGLSLIGAVV 230

Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFV----LALN 570
           +E VA  G      +GL + I ES  +   P +        + GV+I  C      LAL 
Sbjct: 231 AEFVAGTGGTK---SGLASRILESGYQLQIPRMFAALFLVSMCGVVIFVCLSVVSHLALR 287

Query: 571 RFLWH 575
           R  WH
Sbjct: 288 R--WH 290


>gi|33592782|ref|NP_880426.1| putative permease of ABC transporter [Bordetella pertussis Tohama
           I]
 gi|33572430|emb|CAE41996.1| putative permease of ABC transporter [Bordetella pertussis Tohama
           I]
 gi|332382195|gb|AEE67042.1| putative permease of ABC transporter [Bordetella pertussis CS]
          Length = 257

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 164 TRWGLIKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E      V+  +L++      +++F+   L
Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247


>gi|21224423|ref|NP_630202.1| transport system integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|13276821|emb|CAC33939.1| putative transport system integral membrane protein [Streptomyces
           coelicolor A3(2)]
          Length = 303

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I  P+G+ +     + + I P    L + P+  + P     V +  LN N  +  ++
Sbjct: 115 ALVIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 170

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   +++G       F     +   TG R   +I+LP   P YV G       
Sbjct: 171 LLGAVPSIANGLVSGVDQVSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAF 230

Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +W + + +E +AS+  + +   GLG  +           V   +L++    +A++  ++ 
Sbjct: 231 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFS 287

Query: 576 PL 577
           PL
Sbjct: 288 PL 289


>gi|124265309|ref|YP_001019313.1| membrane protein [Methylibium petroleiphilum PM1]
 gi|124258084|gb|ABM93078.1| membrane protein [Methylibium petroleiphilum PM1]
          Length = 281

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ FG  + +  N   G  A      E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 151 LVAFGVFFPVYLNTFHGIRAVDPALIEMARSYGLSGFALYRQVILPGALPNILVGLRFAL 210

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S         G+G     + E      V++G+L+             
Sbjct: 211 GLMWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADLAAK 264

Query: 568 ALNR--FLWHPLY 578
           AL R    WHP Y
Sbjct: 265 ALERWWLRWHPGY 277


>gi|329114191|ref|ZP_08242953.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696267|gb|EGE47946.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 260

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 19/158 (12%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L  I+ +++ +P L ++ F +++F     G        A F I  S  W   ++ + ++
Sbjct: 102 LLEGIVRLLRPVPGLAWVPFAILWFGLNTSG--------ATFVIAISVFWINFYAAHSAV 153

Query: 159 CNIPRDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
             +  +L E++ +F    +  + + + +P + PGL+  +   +  GW  VVA+E+  V  
Sbjct: 154 RGVDPELYELAAAFGHGSFLGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-- 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                PGIG+ +   ++   LLA    ++ ML +  LY
Sbjct: 212 -----PGIGARM---MQASSLLATDVVVVYMLTMALLY 241


>gi|227545025|ref|ZP_03975074.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908161|ref|ZP_07125628.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227184994|gb|EEI65065.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894700|gb|EFK88055.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 299

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 16/172 (9%)

Query: 60  SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           +LP  A+  ++ +LS       A+V+++  T +  + A K       L P ++++  IP 
Sbjct: 76  ALPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129

Query: 112 -ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            + G++  TV+  F+  + G      LAA   +F   +  MT     S   +P+     S
Sbjct: 130 VVYGYVGLTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNAS 189

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                + WQ    + +P +  G++  M+  M+  +   +A +M++   TV+P
Sbjct: 190 AGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241


>gi|221196548|ref|ZP_03569595.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221203217|ref|ZP_03576236.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221177151|gb|EEE09579.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221183102|gb|EEE15502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 363

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F   Y         AA F I  +  + +  
Sbjct: 194 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 245

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  + ++ R   +V+R+F  S       + +P ++P +   + M +S  +  +V +EM
Sbjct: 246 LTWSGIASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 305

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y++ A      +  +YA L ++ ++F
Sbjct: 306 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 339


>gi|161520882|ref|YP_001584309.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189352935|ref|YP_001948562.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344932|gb|ABX18017.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189336957|dbj|BAG46026.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 363

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F   Y         AA F I  +  + +  
Sbjct: 194 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 245

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  + ++ R   +V+R+F  S       + +P ++P +   + M +S  +  +V +EM
Sbjct: 246 LTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 305

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y++ A      +  +YA L ++ ++F
Sbjct: 306 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 339


>gi|221215174|ref|ZP_03588140.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221164858|gb|EED97338.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 340

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SRR+G  + P+L ++  +P    L  T  +F   Y         AA F I  +  + +  
Sbjct: 171 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 222

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             +  + ++ R   +V+R+F  S       + +P ++P +   + M +S  +  +V +EM
Sbjct: 223 LTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 282

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           + V        G+G Y++ A      +  +YA L ++ ++F
Sbjct: 283 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 316


>gi|194467048|ref|ZP_03073035.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri 100-23]
 gi|194454084|gb|EDX42981.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri 100-23]
          Length = 299

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 16/172 (9%)

Query: 60  SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111
           +LP  A+  ++ +LS       A+V+++  T +  + A K       L P ++++  IP 
Sbjct: 76  ALPMIATSFSVTLLSGIIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129

Query: 112 -ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            + G++  TV+  F+  + G      LAA   +F   +  MT     S   +P+     S
Sbjct: 130 VVYGYVGLTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNAS 189

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                + WQ    + +P +  G++  M+  M+  +   +A +M++   TV+P
Sbjct: 190 AGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241


>gi|42780970|ref|NP_978217.1| sugar ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42736891|gb|AAS40825.1| sugar ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 277

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           TF + Q    +P++LEE +R    + +Q +WY+ +P + PGL+
Sbjct: 156 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 198


>gi|33602004|ref|NP_889564.1| putative permease of ABC transporter [Bordetella bronchiseptica
           RB50]
 gi|33576442|emb|CAE33520.1| putative permease of ABC transporter [Bordetella bronchiseptica
           RB50]
          Length = 257

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E      V+  +L++      +++F+   L
Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247


>gi|299132234|ref|ZP_07025429.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298592371|gb|EFI52571.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 277

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHL-NPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            P  ++L   P   + PL    + ++ L NP  +   L+  G  + +L N IAG      
Sbjct: 117 NPLIEVLRPIPPIAYIPL---AILWFGLGNPPAYF--LISIGAFFPVLLNTIAGVRHVDG 171

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   A +  ++ ++ +  +ILP   PY ++GA    G A+   IV+E+ +        +
Sbjct: 172 IYIRAARNLGVSQYQMFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIA------VNS 225

Query: 538 GLGAYIAESTE 548
           GLG  I E+ E
Sbjct: 226 GLGFRILEARE 236


>gi|227819515|ref|YP_002823486.1| spermidine/putrescine ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|227338514|gb|ACP22733.1| probable spermidine/putrescine ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 304

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           ++ A + A+       M   ++ +L  I R L E +R    S WQ  W + +P + PG  
Sbjct: 173 SDFAVVLAMVHLNTLFMVTPIFNTLMRIDRSLIEAARDCGASSWQVLWNVVLPLAKPG-- 230

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 M+ G  FVV   M       +   G  + +AL +K Q
Sbjct: 231 ------MAIGSIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 267


>gi|156933915|ref|YP_001437831.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532169|gb|ABU76995.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894]
          Length = 237

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +RR     + I ++  ++P L  L   +V         V+G  +  AI A+F + +  +
Sbjct: 73  AARRFAEYAMQIFNVGNTLPPLAVLALAMV---------VVGIGDKPAIVALFLASLLPI 123

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + Y  LC++P  L E +    ++  Q+ W + +P +     W +M+S
Sbjct: 124 VRNTYAGLCSVPGSLIEAANGIGMTKGQRLWQVELPNA-----WPVMLS 167


>gi|167031281|ref|YP_001666512.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857769|gb|ABY96176.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 265

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKEG 264


>gi|104779506|ref|YP_606004.1| sulfonate ABC transporter permease SsuC [Pseudomonas entomophila
           L48]
 gi|95108493|emb|CAK13187.1| sulfonate ABC transporter, permease protein SsuC [Pseudomonas
           entomophila L48]
          Length = 265

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 17/139 (12%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 190

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------GVLIMCCFVLA 568
           G  W   IV+E  S        +G+G Y+A +  +    +VV+       VL  C  + A
Sbjct: 191 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVLAIVLYAVLGKCADLAA 243

Query: 569 --LNR--FLWHPLYLYGTR 583
             L R    WHP Y    +
Sbjct: 244 RGLERVWLRWHPAYQVAKK 262



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 83/178 (46%), Gaps = 19/178 (10%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANS 207

Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLG-VIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D++ +   +  +LG    L  + L R  + W   +++ +  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKCADLAARGLERVWLRWHPAYQVAKKEG 264


>gi|90410058|ref|ZP_01218075.1| putative permease [Photobacterium profundum 3TCK]
 gi|90329411|gb|EAS45668.1| putative permease [Photobacterium profundum 3TCK]
          Length = 296

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 17/169 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  V+ P+LDIMQ++P   +L   V   M L  GK+ G     I+A+    ++ N
Sbjct: 129 ARSNRVQSVVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGVIAVVIYAVPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +      +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      VV 
Sbjct: 186 LGIRL------VDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAMVVI 239

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 240 ASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281


>gi|311069100|ref|YP_003974023.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869617|gb|ADP33092.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942]
          Length = 309

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAAFKTSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++ ++P+ L E S +   + WQ    + VP + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               ++P
Sbjct: 245 GNTRILP 251


>gi|257054195|ref|YP_003132027.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256584067|gb|ACU95200.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 298

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 17/168 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             A +T   +L A VIS++       LAA+S     ++ PI+D +Q++P   +L   V++
Sbjct: 98  DSAMQTLALVLLAAVISVILAVPLGVLAARSDTASRIIKPIMDFLQTVPQFVYLIPAVIF 157

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG V     A    +  +++          +  + R++ E   +F     +   
Sbjct: 158 FGIGVGPGVVATVMFALAPGVRLTEL---------GIRQVDREMVEAGEAFGSPPMKILR 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            + +P +MP +       M+G    ++ S  +VV   ++  PG+G+ +
Sbjct: 209 EIQLPLAMPSI-------MAGVNQIIMLSLSMVVIAGMVGAPGLGAQV 249


>gi|218681296|ref|ZP_03529193.1| probable spermidine/putrescine ABC transporter, permease protein
           [Rhizobium etli CIAT 894]
          Length = 255

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)

Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157
           I+ ++  IP+LG   L  + +  M + P  +   + ++ A + A+       M   ++ +
Sbjct: 88  IIRMISWIPVLGRNGLVNSALIEMGVIPKPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 147

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  I R L E +R    S WQ  W + +P + PG        M+ G  FVV   M     
Sbjct: 148 LMRIDRSLFEAARDAGASSWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 199

Query: 218 TVIPLPGIGSYIALAIKEQ 236
             +   G  + +AL +K Q
Sbjct: 200 VQVMSGGQSASVALMMKNQ 218


>gi|256810304|ref|YP_003127673.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
 gi|256793504|gb|ACV24173.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
          Length = 171

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 5/157 (3%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           FA L+ A P+     LVV  +      P ++  LL        I+ N   G S   N   
Sbjct: 18  FANLVQAIPSFAVVALVVPLLGI-GFTPAIFAILLRAL---LPIVKNTYVGLSEVDNSII 73

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-ASWGHIHLRTTGL 539
           + A    +T W    Y+  P  +P    G   A   A + +I++ +  S G   L   GL
Sbjct: 74  DAAKGIGLTEWEIIGYVRFPHAYPAMFAGIKFAAVLANSIAILTAIIGSGGLGTLVFEGL 133

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
            ++  E    GS P ++L VLI   F     R    P
Sbjct: 134 ASFNIEKVLAGSIPAIILAVLIDLSFSFMEKRLYKIP 170


>gi|239825865|ref|YP_002948489.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. WCH70]
 gi|239806158|gb|ACS23223.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. WCH70]
          Length = 211

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+I++L       +  + ++L   ++ I  I+Q+IP L  L F +  F        IG
Sbjct: 27  TAMIIAILVAVPLGIVLTRHKKLAEPIIGIAAIIQTIPSLALLGFMLPIFG-------IG 79

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S+P
Sbjct: 80  -KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLP 135


>gi|332561409|ref|ZP_08415722.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
 gi|332273911|gb|EGJ19229.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
          Length = 313

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)

Query: 68  TTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TTL +++A V + ++       LA KS R    + P LD MQ+IP   +L   V   M L
Sbjct: 104 TTLAIVNAAVALCVIIGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYL---VPVVMLL 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G V G  +  IFA+    +  +T      + N+   + E +R+F  +  Q  + + +P
Sbjct: 161 GIGNVSGVIVTIIFAL--PPLVRLT---SLGIRNVNPGVVEAARAFGATPRQILFKVELP 215

Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + P    GL   +M+S+S     VV + MI V        G+G+ +  A+   D
Sbjct: 216 LATPTILAGLNQTIMLSLS----MVVIASMISV-------KGLGNEVLRAMGRLD 259


>gi|54303455|ref|YP_133448.1| putative permease [Photobacterium profundum SS9]
 gi|46916885|emb|CAG23648.1| putative permease [Photobacterium profundum SS9]
          Length = 296

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 17/169 (10%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149
           A+S R+  V+ P+LDIMQ++P   +L   V   M L  GK+ G     I+A+    ++ N
Sbjct: 129 ARSNRVQSVVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGVIAVVIYAVPPVIRLTN 185

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +      +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      VV 
Sbjct: 186 LGIRL------VDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAMVVI 239

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 240 ASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281


>gi|33597601|ref|NP_885244.1| putative permease of ABC transporter [Bordetella parapertussis
           12822]
 gi|33574029|emb|CAE38352.1| putative permease of ABC transporter [Bordetella parapertussis]
          Length = 257

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E      V+  +L++      +++F+   L
Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247


>gi|303252162|ref|ZP_07338330.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247499|ref|ZP_07529544.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648945|gb|EFL79133.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306856002|gb|EFM88160.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 249

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 20/204 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T + +++ + +  L   + A   + S+ L   L+P+L I Q+IP+     F +  
Sbjct: 52  QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + L+ G  + +++A    I    V   T + Y  L N P+   E++++  +        
Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAMLLL 163

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P L   + +++S      V     VVG+ V    G+G Y+ L    +    +L
Sbjct: 164 VRLPAALPVLASGLRIAVS------VVPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216

Query: 243 YAMLTMLGVI-----FLYDQLLFR 261
           +A LT+L ++     F+ D+LL R
Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240


>gi|284033391|ref|YP_003383322.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283812684|gb|ADB34523.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 265

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 23/192 (11%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI----------VDIVPITLDVHSLPQ 63
           R FP +  +LA V V  ++ +L+  ++      D+          +D +   L    LP+
Sbjct: 4   RFFPVLAHVLALVAVAPLLWVLVSVLKPA---EDVFSFGWPSSWTLDNLQYVLLKFPLPR 60

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV---PILDIMQSIPILGFLTFTV 120
           +   + +  ++  VI+L F  + A   A+ R  G  L+    +  ++ S+P++    F V
Sbjct: 61  FLLNSAIVSVAVTVIALFFHSMAAYALARLRFPGRALIFSGIMSTLLVSLPVILVPLFLV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              +NL      G  + +IF  F        F + Q   NIPR+LEE +       W+++
Sbjct: 121 AKQLNLL-DSYAGLIVPSIFHAFG------IFLLRQYYLNIPRELEEAADLDGCGYWRRY 173

Query: 181 WYLGVPFSMPGL 192
           W + +P S P L
Sbjct: 174 WSVILPLSRPVL 185


>gi|161620534|ref|YP_001594420.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260568230|ref|ZP_05838699.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|161337345|gb|ABX63649.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260154895|gb|EEW89976.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
          Length = 284

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 233 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 267


>gi|134301039|ref|YP_001114535.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134053739|gb|ABO51710.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 278

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 18/152 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   +L+A +IS++       L A+      +++P+LD MQ++P   +L    ++F  L
Sbjct: 93  ETLALVLTAALISIIVGIPTGILCARKDTARDLVMPLLDFMQTMPAFVYL-IPAIFFFGL 151

Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             GKV G   + IFA+  T ++ N+       +  +P +L E + +F  +  QK   + +
Sbjct: 152 --GKVPGVIASVIFAMPPTIRLTNL------GIRQVPAELIEAADAFGSTPTQKLLKVQL 203

Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMI 213
           P +    M G+   +M+++S     VV + MI
Sbjct: 204 PLAKQTIMAGINQCIMLALS----MVVIASMI 231


>gi|119387604|ref|YP_918638.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378179|gb|ABL72942.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 259

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 87/227 (38%), Gaps = 32/227 (14%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           D+FW  V        AW   G I  H         +W   IT+    +  +I ++  +  
Sbjct: 45  DVFWQIV--------AWFRSGEIWRH---------LW---ITLIEAALAFVIGAVAAMIA 84

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G W+  RP +++   P+ +   A P  V  P+             +W  + + F   ++I
Sbjct: 85  GFWLARRPKLAAVFDPYVKAANALPRVVLAPIFT-----LWFGLGIWSKVALGFTLVFFI 139

Query: 465 L-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           + FNV  G         + A    ++  +  R++ LP    +  +    + G A   ++V
Sbjct: 140 VFFNVYQGVKEVNRTVLQNARMLGMSERQLLRHVYLPSALSWVFSSLHVSIGFAVVGAVV 199

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            E          + GLG  IA++        V  G+ ++  FVL ++
Sbjct: 200 GEYLG------SSAGLGYLIAQAEGMFDIAGVFAGMFVLSAFVLLID 240


>gi|322411670|gb|EFY02578.1| ABC-type glycine betaine transport system protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 508

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 29/182 (15%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++I+LL     A L ++S+R   +++ +  + Q+IP L  L   +       P   IG 
Sbjct: 29  SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +  
Sbjct: 82  -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138

Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                MSG    V  S ++++G     ++I   G+GS+I L I   +      A L M+G
Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNN------ANLIMIG 183

Query: 251 VI 252
            I
Sbjct: 184 AI 185


>gi|77407277|ref|ZP_00784223.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174114|gb|EAO77037.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 268

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 102 PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
           P ++++  IP  + GF+   ++  +  +++ G   G  L+ +  +F   +  +TF    S
Sbjct: 82  PAVELLVGIPSVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDS 140

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +PR  +E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V   
Sbjct: 141 LRAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNS 200

Query: 218 TVIP 221
            ++P
Sbjct: 201 AILP 204


>gi|99078629|ref|YP_611887.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99035767|gb|ABF62625.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 245

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L  +VI +    + A   A SR   +++ PIL   Q++P+     F +   + L+
Sbjct: 55  TAAEVLIGLVIGVALGVLTALHLATSRTARLLVQPILVFTQALPV-----FALAPILTLW 109

Query: 128 PGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            G  + +++A A+  I+    + +T S +  L   P+   +++R+ + +  +  W++ VP
Sbjct: 110 LGFGLWSKIAMAVLIIY----FPVTASFFDGLMRTPQGYLDLARTMQATPLRVLWHIRVP 165

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P L   + ++       V A    V+G+ V    G+G  + LA        +  AML
Sbjct: 166 AALPSLASGIRLAA------VYAPIGAVIGEWVGASRGLGYLMLLANGRAKTDLMFAAML 219

Query: 247 TMLGVIFLYDQLLFR 261
           T LGV  +   L+ R
Sbjct: 220 T-LGVFSVLLHLVVR 233


>gi|332715832|ref|YP_004443298.1| spermidine/putrescine ABC transporter membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325062517|gb|ADY66207.1| spermidine/putrescine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 302

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M   ++ +L  I + L E +R    +GWQ  W + +P + PG        M+ G  FVV 
Sbjct: 187 MVTPIFNTLMRIDKSLIEAARDAGATGWQTLWNVIIPLAKPG--------MAIGSIFVVT 238

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQ 236
             M       +   G  + +AL +K Q
Sbjct: 239 LVMADFSTVQVMSGGQSASVALMMKNQ 265


>gi|325264908|ref|ZP_08131636.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp.
           D5]
 gi|324029897|gb|EGB91184.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp.
           D5]
          Length = 268

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 10/179 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV     +A++  + +G   G  P     + P   L+   P   + P+ +       
Sbjct: 72  SLKRVASGFGLAAVCGLILGFLSGGIPIARRLVDPLIHLVRTVPGIGWLPVAIVWFGIGE 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N    ++L   F     I  N + G S  P             G+  +R +ILP  FP 
Sbjct: 132 GNTLFLIALASFF----PIYINTVHGTSQVPEVTLRAGRMLGAKGFALFRTVILPAAFPD 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              G     G AW   ++ EV         T GLGA + +    G    V+  ++++ C
Sbjct: 188 VAVGLRLGLGVAWAYLVLGEVTGV------TEGLGAVMTDGRMLGHVDIVLATMIVIAC 240


>gi|146337666|ref|YP_001202714.1| putative sulfonate ABC transporter permease (ssuC/ycbM-like)
           [Bradyrhizobium sp. ORS278]
 gi|146190472|emb|CAL74471.1| putative sulfonate ABC transporter, permease protein
           (ssuC/ycbM-like) [Bradyrhizobium sp. ORS278]
          Length = 282

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +RRL   + P +  +++IP + ++   +++       KV    +   F ++         
Sbjct: 112 ARRL---VDPTIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 160

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++ ++ R + EV R FRLSG      + +P  +P  V  + + +  GW FVVA+E 
Sbjct: 161 GLTGAILSVDRKIVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAAEF 220

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSN 268
           +   +      G+G Y+ +  ++    A + A + +  VI      L      P++ W +
Sbjct: 221 MGASE------GLG-YLLIDGQQLGKPAQIVAAIVIFAVIGKATDWLLEIATAPLLRWQD 273

Query: 269 KFRLERTTG 277
            F   R +G
Sbjct: 274 SF--ARQSG 280


>gi|328880173|emb|CCA53412.1| Choline or glycine betaine ABC transporter,permease protein
           [Streptomyces venezuelae ATCC 10712]
          Length = 665

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           T  ++L+A+ ++LL        AA+S RLG  L P+LD+ Q++P   +L   V  F
Sbjct: 476 TLSQVLAAVAVTLLLGVALGIAAARSTRLGRALRPVLDVFQTMPQFVYLIPVVALF 531


>gi|283769434|ref|ZP_06342332.1| ABC transporter, permease protein [Bulleidia extructa W1219]
 gi|283103959|gb|EFC05344.1| ABC transporter, permease protein [Bulleidia extructa W1219]
          Length = 251

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 464 ILFNVIAGASAFPN-DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           I ++ I  A    N   +E++  FHI+  + +RY+ L  I PY  T    A G  W A +
Sbjct: 132 IFYDQILKALESQNPSLEEMSIVFHISKKKKFRYLTLAQILPYLETACSLAIGFCWKAGM 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAEST 547
            +EV     I L    +G+ + E+ 
Sbjct: 192 AAEV-----IGLPDGAIGSQLHEAK 211


>gi|260598009|ref|YP_003210580.1| glycine betaine/carnitine/choline transport system permease opuCB
           [Cronobacter turicensis z3032]
 gi|260217186|emb|CBA31041.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Cronobacter turicensis z3032]
          Length = 215

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      ++  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGLATLVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|254461005|ref|ZP_05074421.1| glycine betaine transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677594|gb|EDZ42081.1| glycine betaine transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 342

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 30/152 (19%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +KS +L   +VP+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 174 SKSDKLQRSVVPVLDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVVRLTDL 232

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      + +D+ E + +F ++  QK   + +P ++P    G+   +MMS++     
Sbjct: 233 GIRL------VDQDVIEAANAFGMNSRQKLMGVELPLALPNIMAGINQTIMMSLA----- 281

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 282 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 307


>gi|3420607|gb|AAC31906.1| ABC transporter membrane subunit [Pseudomonas putida]
          Length = 265

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           + +++++P L  +   +++F      K+    L  +F I+         + Y  + N+  
Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L E++RS+ LSG+  F  + +P ++P ++  +  ++   W        ++V +T+    
Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207

Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           GIG Y+A+  +E    D   L  +LYA+L  L    L  + L R  + W   +++ +  G
Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKEG 264


>gi|70733220|ref|YP_262993.1| aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68347519|gb|AAY95125.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 262

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 187

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       ++G+G     + E      VVL +++             
Sbjct: 188 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 241

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 242 GLERVWLRWHPAY 254


>gi|325497213|gb|EGC95072.1| ABC transporter membrane protein, membrane component [Escherichia
           fergusonii ECD227]
          Length = 216

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + PILG  T      +V  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPILGTATLLLTIPSVALFGLMIPLFSLFGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|319790873|ref|YP_004152513.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593336|gb|ADU34402.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 293

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 12/163 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T++RV    ++A++  +P+GI +G    + +  +PF       PA+ F PL++      
Sbjct: 102 MTVWRVFGGFLLAAVFAVPLGIAMGTWKTVEAFFEPFVSFCRYLPASAFIPLLILWAGLG 161

Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +       LL+IF G+ + I+  V         D  E A +           +++PG  
Sbjct: 162 EMQ-----KLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGANSRGIVARVLIPGAA 216

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P          G AW   IV+E+         ++G+G  I +S
Sbjct: 217 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 253


>gi|108799491|ref|YP_639688.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119868604|ref|YP_938556.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|108769910|gb|ABG08632.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119694693|gb|ABL91766.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
          Length = 279

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      D  +VA S      +  R+I++P + P+ +TG   + G A   ++++E+ +  
Sbjct: 173 GVQEIDRDLLDVAKSLRANRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIAAS 232

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG YI  S+       V  G+ ++    +AL + L
Sbjct: 233 Q------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLL 269


>gi|332298529|ref|YP_004440451.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332181632|gb|AEE17320.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 257

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++  V AG  +      + A  +  +  R  RY+ LP   PY+ +GA++A G +W     
Sbjct: 139 VIAAVSAGIGSADRKLLDCARVYGFSAARTARYVYLPSCTPYFWSGALSAFGLSWKVVAA 198

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            EV S   +  R  G   Y A+   + +    V  VLI+ CF L
Sbjct: 199 GEVLS---LPRRAAGTLLYNAKVHLETADVFAVTIVLIILCFTL 239


>gi|298675885|ref|YP_003727635.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298288873|gb|ADI74839.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 260

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 18/172 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++I++ IP L ++ F +V+    +         AA F IF   V+ +  + Y    ++
Sbjct: 98  PIIEILRPIPPLAWIPFALVWLGLTHT--------AAGFVIFVGAVFPIIINTYTGFKSV 149

Query: 162 PRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           P+   E ++       +    ++  P S+P +   + + M  GW  +VA+E   V     
Sbjct: 150 PKINVEAAKVLGCVKQRSLIRHIAFPSSLPSITAGIRIGMGVGWMCLVAAEFFGVSKN-- 207

Query: 221 PLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIF--LYDQLLFRPMIVWSN 268
              G+G  +     + + D + +   ML +LG+I   ++ + + + ++ W +
Sbjct: 208 ---GLGYKLWWHYGLHQMDFVLMYMFMLGILGLIIDKVFRKYIDKRLLKWQS 256


>gi|222053468|ref|YP_002535830.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221562757|gb|ACM18729.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 255

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 33/174 (18%), Positives = 78/174 (44%), Gaps = 8/174 (4%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           ++   P D+V  +    D+ +L  +   +  R  +A ++++L          +  R    
Sbjct: 35  EQFPAPSDVVRAIVELADMGTLWSHMGISLARFGAAYLLAVLAGIPLGLFLGRFIRCHKA 94

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P++ +++ I  + +    V++F        IG    A+F IF +  + +  +   ++ 
Sbjct: 95  IDPLIQVLRPISPIAWFPLAVLWFG-------IG-NAPAVFIIFLASFYPVLLATISAVR 146

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +P    +V+ +F       F  + VP + PG++  + +++  GW  +VA EM+
Sbjct: 147 AVPPVYLKVAGNFGARADMTFLRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEML 200


>gi|52081034|ref|YP_079825.1| phosphate ABC transporter permease [Bacillus licheniformis ATCC
           14580]
 gi|52786411|ref|YP_092240.1| hypothetical protein BLi02675 [Bacillus licheniformis ATCC 14580]
 gi|319645009|ref|ZP_07999242.1| PstC protein [Bacillus sp. BT1B_CT2]
 gi|52004245|gb|AAU24187.1| phosphate ABC transporter (permease) [Bacillus licheniformis ATCC
           14580]
 gi|52348913|gb|AAU41547.1| PstC [Bacillus licheniformis ATCC 14580]
 gi|317392818|gb|EFV73612.1| PstC protein [Bacillus sp. BT1B_CT2]
          Length = 309

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM- 154
           VL P+++++  IP  + GF+  TV V F++ +     G  L A   +    +     S+ 
Sbjct: 125 VLQPVVELLVGIPSVVYGFIGLTVLVPFISQFKSSGSGHSLLAGTIVLAVMILPTVTSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L ++P++L E S +   + WQ    + +P ++P L+  +++ M+  +   +A +M++
Sbjct: 185 TDALMSLPKNLREGSYALGATRWQTIRKVLIPAALPSLLTAVVLGMARAFGEALAVQMVI 244


>gi|15802680|ref|NP_288707.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|12516435|gb|AAG57262.1|AE005444_12 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
          Length = 385

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAGLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|290956061|ref|YP_003487243.1| taurine ABC transporter transmembrane protein [Streptomyces scabiei
           87.22]
 gi|260645587|emb|CBG68678.1| putative taurine transport protein (ABC superfamily, membrane)
           [Streptomyces scabiei 87.22]
          Length = 257

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++IA+   I  G  I   PH+        + L   P+    PL V  +    L   L   
Sbjct: 68  LLIAATAGILTGGVIAVVPHLREATSSTIEFLRPIPSVALVPLAV-LLYGSELRSVL--- 123

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +L+++ + W IL   + G        +E A S+ +  W   R+++ P   PY +TG
Sbjct: 124 VLVVYASFWQILIQTLYGVQDVDPVAEETARSYGLGPWARVRHVLWPSALPYVMTG 179


>gi|170745431|ref|YP_001766888.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170659032|gb|ACB28086.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 262

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 6/142 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  +  +++   +G+  G  P I +     ++L+   P     PL +       
Sbjct: 71  SLRRVGIAFVGGAVLGTGIGLLRGRVPEIDALFLVPSELVRPIPPLGLIPLFILWFGIGE 130

Query: 446 LNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +      +L+IF + + I + N  AGA A   D    A S   + W+ +R+++LP   P
Sbjct: 131 TS-----KILLIFLSVFLIAMVNAQAGAGACGLDTLRAARSMGASRWQAFRFVVLPSALP 185

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG   A G A    + +E+
Sbjct: 186 QIMTGLRVAMGTALTILVAAEL 207


>gi|156934057|ref|YP_001437973.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532311|gb|ABU77137.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894]
          Length = 288

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 57  DVHS--LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           D+HS  LP     +   +L    I  +   V++ LA  S RLG  L+  L  M +     
Sbjct: 78  DMHSGELPAKILNSLGTLLKGYAIGSVLALVFSALAI-STRLGRDLLSTLTAMLNPLPAI 136

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L    + +  L  G +I       F +  S +W +  + +    ++P  L    R++ L
Sbjct: 137 ALLPLALLWFGLGQGSLI-------FVLVHSVMWPIALNTWSGFQSVPETLRMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           SG +    + +P ++P ++  + +  +  W  ++A+E++
Sbjct: 190 SGPRLVLNILIPAALPSIISGLKIGWAFAWRTLIAAELV 228


>gi|91974596|ref|YP_567255.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91681052|gb|ABE37354.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 286

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA+E
Sbjct: 169 AIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAAE 223


>gi|33594811|ref|NP_882454.1| ABC transport system permease protein [Bordetella parapertussis
           12822]
 gi|33599083|ref|NP_886643.1| ABC transport system permease protein [Bordetella bronchiseptica
           RB50]
 gi|33564887|emb|CAE39832.1| ABC transport system permease protein [Bordetella parapertussis]
 gi|33575129|emb|CAE30592.1| ABC transport system permease protein [Bordetella bronchiseptica
           RB50]
          Length = 256

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+V    A+ + IP+GI++G      +   P    L   P+  + PL    + ++ +  
Sbjct: 70  RVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPL---SLLWFGITE 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               S++ + GT    L  VI             A +   +G +  R +ILP   P   +
Sbjct: 127 TQKYSIVFM-GTFAPALLYVIEATRNIDPLLIRAARNLGASGPQVMRSVILPASLPQIFS 185

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G     G +W   I +E+ +         GLG  I    E      VVLG+ ++   VL 
Sbjct: 186 GFKVILGLSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLV 239

Query: 569 LN 570
            +
Sbjct: 240 TD 241


>gi|73748092|ref|YP_307331.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|147668880|ref|YP_001213698.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dehalococcoides sp. BAV1]
 gi|289432118|ref|YP_003461991.1| phosphate ABC transporter inner membrane protein [Dehalococcoides
           sp. GT]
 gi|73659808|emb|CAI82415.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|146269828|gb|ABQ16820.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Dehalococcoides sp. BAV1]
 gi|288945838|gb|ADC73535.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dehalococcoides sp. GT]
          Length = 286

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG- 129
           L AMVI++      A L A+   RR+  +L P ++++  IP    + + +V  M + P  
Sbjct: 76  LGAMVIAVPLGIACAILLAEVAPRRVRDLLRPAVELLVGIP---SVVYGLVGIMVIVPAV 132

Query: 130 KVIGAELAAIFA---IFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + +G    +I A   + +  V     S+ + SL  +PR   E S +   S WQ  W++ +
Sbjct: 133 RNLGGTGYSILAAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLL 192

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +  G+  ++++ M       +A  M++    +IP
Sbjct: 193 PAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIP 228


>gi|242238796|ref|YP_002986977.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242130853|gb|ACS85155.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 564

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 13/187 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP     +  R L+  +I +   ++       S R   +  P L +++ + +  +L   
Sbjct: 361 TLPDAMLHSLFRALTGGIIGVSTGWLAGIALGLSTRAEALFAPSLSLLRQVALFAWLPLI 420

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +  N   GKV    LAA F         M  + ++ +      L+EV++  RL    +
Sbjct: 421 TAWAGNDEGGKVTFVALAAFFP--------MLVASHRGVRQRSAALQEVAQILRLPLSAR 472

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P + P +   + +S+   W   V +E  +         GIGS +  A +  ++ 
Sbjct: 473 LRVLILPGAAPAMFTGLRLSLIHAWLGTVGAEYFMSSGA-----GIGSLMINAQQLMEMP 527

Query: 240 AILYAML 246
            IL  ML
Sbjct: 528 IILSGML 534


>gi|217976954|ref|YP_002361101.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502330|gb|ACK49739.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 286

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 10/145 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIPILGFLTFTVVYFMNL 126
           T LR+ +   + +        LA  S  LG  L+ P L  +++IP + ++   +++F   
Sbjct: 87  TLLRVGAGFALGVFAGTTLGVLAGASS-LGRALIDPTLQGLRAIPSIAWVPLFILWFGIF 145

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+    +   F I+          ++ ++  + R + E  RSFRL G      +  P
Sbjct: 146 EASKIALIAVGVAFPIY--------LGIFGAILAVDRKIIEAGRSFRLEGVALARRILFP 197

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASE 211
             +P  V  +   +  GW FVVA+E
Sbjct: 198 AVLPHYVVALRSGLGLGWMFVVAAE 222


>gi|91776909|ref|YP_546665.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91710896|gb|ABE50824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 283

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 36/191 (18%), Positives = 89/191 (46%), Gaps = 16/191 (8%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R+ S  +++ +       LA   RR+ + + P++D ++ +P + F+   +++       
Sbjct: 94  VRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFIRYMPAVAFVPLVLLWCGV---- 149

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E + I  IF    + M   M  ++  +P    E +++   +  +  + + +P + 
Sbjct: 150 ----GEASKIALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQTMGATRRELLFKVILPSAA 205

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L+  + +++   W ++V +E++   +      G+G Y  L  +   L   ++A + ++
Sbjct: 206 PALLDTIRVTLGWAWTYLVVAELVAANE------GLG-YAILRAQRFLLTDKIFAGILVI 258

Query: 250 GVI-FLYDQLL 259
           G+I  + DQLL
Sbjct: 259 GLIGLIQDQLL 269


>gi|87311015|ref|ZP_01093140.1| phosphate ABC transporter, permease protein [Blastopirellula marina
           DSM 3645]
 gi|87286305|gb|EAQ78214.1| phosphate ABC transporter, permease protein [Blastopirellula marina
           DSM 3645]
          Length = 846

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +  +SL  +P  L E S     S WQ  W + +P ++PG++  M+++M+ G
Sbjct: 704 ATEESLAAVPNSLREGSYGCGASKWQTIWRIVLPHALPGIMTGMILAMARG 754


>gi|325673711|ref|ZP_08153402.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|325555732|gb|EGD25403.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 271

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAEL 136
           +SL+  +  A L   S  L    VP+  + Q++PI+      +++F   L P KV+   L
Sbjct: 83  VSLVVAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIAL 141

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           A  F         M   + +   +  R+   + RS   S WQ+F Y+ +P ++P
Sbjct: 142 ATFF--------PMAIGLVEGFASADREAGALLRSMGASKWQQFRYVRLPSALP 187


>gi|262370958|ref|ZP_06064281.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           johnsonii SH046]
 gi|262314034|gb|EEY95078.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           johnsonii SH046]
          Length = 271

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   PA    PLV+    ++ ++    L L+ + G  + I  N   G  +      E+
Sbjct: 115 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 170

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S         G+G  
Sbjct: 171 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQAGIGYM 224

Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578
              + E      V++G+L+            + L ++L  WH  Y
Sbjct: 225 TMNAREFLQTDIVLVGILLYALLGKLADVLAVTLEKYLLRWHAGY 269


>gi|224024789|ref|ZP_03643155.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM
           18228]
 gi|224018016|gb|EEF76023.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM
           18228]
          Length = 398

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 87/198 (43%), Gaps = 14/198 (7%)

Query: 75  AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128
           A++I+L F    +   A+  S  +   L P+++++  IP  + GF    V+  +  + + 
Sbjct: 186 AILIALPFGLAVSIYLAEVASPEMRKFLKPVIELLNGIPSVVYGFFGLAVIVPFLQHTFH 245

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V  + LA    +    +  +      ++ + PR + E S +   + WQ  + + +PFS
Sbjct: 246 LPVGESGLAGSLVLAIMALPTIITVAEDAMRSCPRSMREASLALGATQWQTIYKVVIPFS 305

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI-------PLPGIGSYIALAIKEQDLLAI 241
           + G+   +++ + G       + ++V G+  +       PL  I + IA  + E      
Sbjct: 306 ISGITSGVVLGI-GRAIGETMAVLMVTGNAAVMPASLLEPLRTIPATIAAELGEAPAGGA 364

Query: 242 LYAMLTMLGVIFLYDQLL 259
            Y  L +LGVI  +  L+
Sbjct: 365 HYQALFLLGVILFFITLI 382


>gi|218548807|ref|YP_002382598.1| ABC transporter membrane protein [Escherichia fergusonii ATCC
           35469]
 gi|218356348|emb|CAQ88966.1| putative ABC transporter membrane protein, membrane component
           [Escherichia fergusonii ATCC 35469]
 gi|324113372|gb|EGC07347.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 216

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + PILG  T      +V  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPILGTATLLLTIPSVALFGLMIPLFSLFGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|326798242|ref|YP_004316061.1| glycine/betaine ABC transporter permease [Sphingobacterium sp. 21]
 gi|326549006|gb|ADZ77391.1| ABC-type transporter, integral membrane subunit [Sphingobacterium
           sp. 21]
          Length = 278

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 23/180 (12%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   +T   +LS+ +I+L+        +AK++    ++ P+LD+MQ++P   +L   V++
Sbjct: 86  EETMQTLALILSSTLIALVIAVPLGIWSAKNQTAHKIIRPLLDLMQTMPAFVYLIPAVLF 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     GK+ GA    IFA+    V   T  + Q    +  D+ E +RS   +  Q    
Sbjct: 146 F---SIGKLPGAFATIIFAM-PPAVRLTTLGIEQ----VQGDVLEAARSLGATQRQILLK 197

Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + +P ++     G+   +++S+S     VV + MI  G       G+G  +   I   D+
Sbjct: 198 VELPLALKTILTGINQTILLSLS----MVVIAGMIAAG-------GLGEKVLEGINNLDI 246


>gi|315122235|ref|YP_004062724.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495637|gb|ADR52236.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 281

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + T   +L +  IS+L        AA   R   ++  +LD MQ+IP   +L   +V 
Sbjct: 91  QETTETLSLVLVSTSISMLIGVPLGVFAAWYPRFYSIIRLLLDSMQTIPTFVYLIPALVL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG V       +F+I TS            + + P  L+E +R+F  + +Q F 
Sbjct: 151 FGLGMVPGMVA----TIVFSIPTSVRLT-----RLGIISTPPVLKEAARAFGATPFQVFR 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            + +PF++P +V ++  ++      VV + ++
Sbjct: 202 KVELPFAIPQIVASLTQTIMLSLSMVVVTALV 233


>gi|297197917|ref|ZP_06915314.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197717139|gb|EDY61173.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 299

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 33/71 (46%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++  G  + +  NV AG         E   S  ++ W   R++ILPG  P  +TG   + 
Sbjct: 170 IITLGVTFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVILPGALPGALTGLRYSL 229

Query: 515 GGAWNASIVSE 525
           G AW A + +E
Sbjct: 230 GIAWLALVFAE 240


>gi|221064974|ref|ZP_03541079.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220709997|gb|EED65365.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 282

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 20/217 (9%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A+ +  R+L   V   L   +  TL   SR +   L+P  + +  IP+LG++ F ++  
Sbjct: 79  HAAASLQRVLVGFVAGSLLGLLLGTLMGLSRSVEAYLLPSFNALVQIPVLGWMPFVLLLV 138

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P K I    AA+  +        T +  Q     P++L EV   +  +  Q+   +
Sbjct: 139 GIGEPLKYILIAKAALVPV--------TLATLQGFRQAPQNLLEVGCVYGYTRRQQVLEI 190

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P L   + +  +  W  +V  E++   +      G+G  I    +   L  ++ 
Sbjct: 191 VLPTALPTLFTGLRLGFTKAWLSLVVVELVASSE------GLGYLIVYGRQLFQLDLVMA 244

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
           A++ +  + +L D+LL       + + RL    G+ P
Sbjct: 245 AVIIVGALGYLIDRLLD------AAEARLAARNGVRP 275


>gi|228996491|ref|ZP_04156130.1| Spermidine/putrescine ABC transporter, permease [Bacillus mycoides
           Rock3-17]
 gi|228763123|gb|EEM12031.1| Spermidine/putrescine ABC transporter, permease [Bacillus mycoides
           Rock3-17]
          Length = 266

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A  S    D +E A+    T W+ +RY+  PGI P    G I+A    +  SI   V S+
Sbjct: 147 ARLSGMGRDLEEAANDLGATPWQTFRYVTFPGIAP----GVISAALLTFTLSIDDFVISF 202

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEV 555
                 +T L  YI    ++G  PE+
Sbjct: 203 FVSGPGSTTLPLYIYSMVKRGVTPEI 228


>gi|225628905|ref|ZP_03786939.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
 gi|237817212|ref|ZP_04596204.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|260756762|ref|ZP_05869110.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260760192|ref|ZP_05872540.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260763431|ref|ZP_05875763.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882577|ref|ZP_05894191.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261217092|ref|ZP_05931373.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261220306|ref|ZP_05934587.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261313461|ref|ZP_05952658.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261319303|ref|ZP_05958500.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261319962|ref|ZP_05959159.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261753459|ref|ZP_05997168.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|265986697|ref|ZP_06099254.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265996347|ref|ZP_06108904.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|297249709|ref|ZP_06933410.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|225616751|gb|EEH13799.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
 gi|237788025|gb|EEP62241.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|260670510|gb|EEX57450.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260673852|gb|EEX60673.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676870|gb|EEX63691.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260872105|gb|EEX79174.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|260918890|gb|EEX85543.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|260922181|gb|EEX88749.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261292652|gb|EEX96148.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261298526|gb|EEY02023.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261302487|gb|EEY05984.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261743212|gb|EEY31138.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|262550644|gb|EEZ06805.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|264658894|gb|EEZ29155.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|297173578|gb|EFH32942.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 284

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 233 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 267


>gi|160915350|ref|ZP_02077562.1| hypothetical protein EUBDOL_01358 [Eubacterium dolichum DSM 3991]
 gi|158432741|gb|EDP11030.1| hypothetical protein EUBDOL_01358 [Eubacterium dolichum DSM 3991]
          Length = 280

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 17/116 (14%)

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           TV+ +  +  G+++  E A +  +  + +  M   +  SLC + + L E S     +  Q
Sbjct: 128 TVLSWFGIDTGEILYTETAVLLGMVYNFIPFMILQINTSLCKMDKSLLEASNDLGANKLQ 187

Query: 179 KFWYLGVPFSMPGLVWNMMMS-------------MSGGWFF----VVASEMIVVGD 217
            F  + +P S+PG+V  + +              + GG FF    V+ ++ I VG+
Sbjct: 188 TFLRVTLPLSLPGVVSGITLVFLPAVSSFFIPKLLGGGQFFLIGNVIENQFITVGE 243


>gi|134045438|ref|YP_001096924.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
 gi|132663063|gb|ABO34709.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
          Length = 253

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV++   IA    IP+G+ +G+   I+  +    +L    P   + PL    ++++
Sbjct: 59  VSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELFRPIPPLAWVPL---ALAWF 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +  +  +  ++  G  + IL N I+G  + P    E A +   +     + +++P   P
Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVVVPASSP 174

Query: 505 YYVTGAITACGGAWNASIVSEV 526
             +TG     G AW   + +E+
Sbjct: 175 DILTGLRVGAGIAWMCVVAAEM 196


>gi|15832271|ref|NP_311044.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168750501|ref|ZP_02775523.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|168757703|ref|ZP_02782710.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|168764220|ref|ZP_02789227.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|168771595|ref|ZP_02796602.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|168777293|ref|ZP_02802300.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|168783699|ref|ZP_02808706.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|168788931|ref|ZP_02813938.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|168801190|ref|ZP_02826197.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|195935501|ref|ZP_03080883.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808863|ref|ZP_03251200.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208812541|ref|ZP_03253870.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|209397432|ref|YP_002271532.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|217326974|ref|ZP_03443057.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|254794023|ref|YP_003078860.1| putative ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223416|ref|ZP_05937697.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259034|ref|ZP_05951567.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283378|ref|YP_003500196.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|13362486|dbj|BAB36440.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767440|gb|EDU31284.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015312|gb|EDU53434.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|188999036|gb|EDU68022.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355364|gb|EDU73783.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|189359702|gb|EDU78121.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|189365735|gb|EDU84151.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|189371415|gb|EDU89831.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|189376603|gb|EDU95019.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|208728664|gb|EDZ78265.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208733818|gb|EDZ82505.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|209158832|gb|ACI36265.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|209766438|gb|ACI81531.1| putative transport system permease protein [Escherichia coli]
 gi|209766440|gb|ACI81532.1| putative transport system permease protein [Escherichia coli]
 gi|209766442|gb|ACI81533.1| putative transport system permease protein [Escherichia coli]
 gi|209766444|gb|ACI81534.1| putative transport system permease protein [Escherichia coli]
 gi|209766446|gb|ACI81535.1| putative transport system permease protein [Escherichia coli]
 gi|217319341|gb|EEC27766.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|226237485|dbj|BAH47007.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O55:H7]
 gi|254593423|gb|ACT72784.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290763251|gb|ADD57212.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|320192254|gb|EFW66899.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. EC1212]
 gi|320641196|gb|EFX10674.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. G5101]
 gi|320646584|gb|EFX15495.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. 493-89]
 gi|320651839|gb|EFX20214.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. H 2687]
 gi|320657563|gb|EFX25361.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663169|gb|EFX30478.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667920|gb|EFX34823.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. LSU-61]
 gi|326339472|gb|EGD63283.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. 1125]
 gi|326343934|gb|EGD67695.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. 1044]
          Length = 385

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAGLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|325263383|ref|ZP_08130117.1| sugar ABC transporter, permease protein [Clostridium sp. D5]
 gi|324031092|gb|EGB92373.1| sugar ABC transporter, permease protein [Clostridium sp. D5]
          Length = 293

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 453 SLLMIFGTQW--YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           S+++I G  W  + +F  IAG  A P D+ E A     + W+ +R+I LP + P +    
Sbjct: 160 SVILIEGWMWSGFNMFIFIAGLQAIPADYYESACIEGASKWKQFRHITLPLLIPSFTIII 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE----VVLGVLIMCCFV 566
                G+     +  V + G     T  L  ++ ++   G   E     V+  LI+ C  
Sbjct: 220 TLNITGSLKVFDLIYVLTKGGPGFDTQVLSTFVYKAFGLGLLGESSAASVILSLIVVCIS 279

Query: 567 LALNRFL 573
             LNR+L
Sbjct: 280 FLLNRYL 286


>gi|239625201|ref|ZP_04668232.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519431|gb|EEQ59297.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 263

 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 13/185 (7%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           + ++I IP+GI + +       I+P   LL   P   + PL +       L P    +L+
Sbjct: 82  MGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAWIPLFILLFG-IGLLPK---ALV 137

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   +    + N   G     +    V   F  +  +    I +P   P   TG   A G
Sbjct: 138 IFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASDMQKLFKIAIPTATPMIFTGLRVALG 197

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFLW 574
            AW A + +E+ +       + GLG Y+ +     S P++VL G++ +    LA++R L 
Sbjct: 198 SAWTALVAAELLA------SSNGLG-YMIQQARSISRPDLVLVGMITIGIVGLAMDRLL- 249

Query: 575 HPLYL 579
           H L L
Sbjct: 250 HKLEL 254


>gi|295706799|ref|YP_003599874.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus
           megaterium DSM 319]
 gi|294804458|gb|ADF41524.1| aliphatic sulfonates ABC transporter, permease protein SsuC
           [Bacillus megaterium DSM 319]
          Length = 284

 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R  +   + + + +  G+ +GF       + P  Q+L   P     PL +    + 
Sbjct: 88  ISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      LL+  G  + I  N   G     +   +VA     + W+    +ILP   P
Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW   +V+E+         + G+G  I ++ +      V +G++I   
Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257


>gi|229029558|ref|ZP_04185638.1| Sugar ABC transporter, permease protein [Bacillus cereus AH1271]
 gi|228731757|gb|EEL82659.1| Sugar ABC transporter, permease protein [Bacillus cereus AH1271]
          Length = 245

 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           TF + Q    +P++LEE +R    + +Q +WY+ +P + PGL+
Sbjct: 124 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 166


>gi|156933913|ref|YP_001437829.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532167|gb|ABU76993.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894]
          Length = 216

 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      ++  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 51  ATPVLGLATLVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 109

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 110 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 141


>gi|110635308|ref|YP_675516.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286292|gb|ABG64351.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 210

 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 26/178 (14%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++ VV  + IA II + VGIW+  RP   S I     +L A P+   F L++  +     
Sbjct: 19  LYLVVSSVGIALIISLVVGIWVARRPKAFSAIIMVTGVLFAIPSLALFALLIPLMGIGTG 78

Query: 447 NPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSF-HITGWRWWRYIILPGIF 503
                LS   LMI      ++ N+  G  + P D  E A    + T  R W  + LP   
Sbjct: 79  PAITGLSAYSLMI------LIRNIAVGFQSIPADVLEAAHGMGYGTPRRLWE-VELPLAM 131

Query: 504 PYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           P+ V G     +T  G       ++ VA++    +   GLGA I E  ++  FPE ++
Sbjct: 132 PFIVAGIRIATVTVVG-------IATVAAY----INAGGLGAIIFEGIDQ-RFPEKII 177


>gi|126732156|ref|ZP_01747958.1| putative glycine betaine transport system permease abc transporter
           protein [Sagittula stellata E-37]
 gi|126707445|gb|EBA06509.1| putative glycine betaine transport system permease abc transporter
           protein [Sagittula stellata E-37]
          Length = 277

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +++A V+ +         AA+   L   L P+LD+MQ+IP   +L   ++ 
Sbjct: 91  EETTETLALVIAAAVVCMGVGVPVGIAAARRPWLYNALSPVLDLMQTIPTFVYLIPALIL 150

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F + + PG +       IFAI       +T   +  + + P  L E   +F  +  Q  +
Sbjct: 151 FGLGMVPGLIA----TVIFAI--PAPIRLT---HLGITSTPTALIEAGEAFGATRRQLLY 201

Query: 182 YLGVPFSMP----GLVWNMMMSMS 201
            + +P++MP    GL   +M+S+S
Sbjct: 202 KVELPYAMPQIMAGLTQTIMLSLS 225


>gi|328476073|gb|EGF46783.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus MTCC 5462]
          Length = 221

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ R L   ++ I +++Q+IP L  L+  ++       G  +G     I  +F   +  +
Sbjct: 51  ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             + Y  + N+ ++L + ++   ++ WQ  + + +P SM
Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141


>gi|310779189|ref|YP_003967522.1| molybdate ABC transporter, inner membrane subunit [Ilyobacter
           polytropus DSM 2926]
 gi|309748512|gb|ADO83174.1| molybdate ABC transporter, inner membrane subunit [Ilyobacter
           polytropus DSM 2926]
          Length = 220

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 14/147 (9%)

Query: 130 KVIGAEL-----AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           KV G  L     AA  A F   +  M  S   +  NI   LE+ +R+      + FW +G
Sbjct: 77  KVFGTSLIFTWKAACVASFVVSLPLMYQSCKAAFINIDSSLEKAARTLGADEKRIFWKIG 136

Query: 185 VPFSMPGLVWNMMMSMSG--GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P + PG++   ++S +   G F    + ++V G+    +PG    I +AI         
Sbjct: 137 IPMAAPGIISGTILSFTRALGEF---GATLMVAGN----IPGKTQTIPIAIYFAVDSGDR 189

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNK 269
                ++G++ ++  L+   + +W+ K
Sbjct: 190 RTANILVGIVVIFSFLVIYGLNIWNRK 216


>gi|239932299|ref|ZP_04689252.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291440664|ref|ZP_06580054.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343559|gb|EFE70515.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 872

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 4/139 (2%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F + D L +     +T+  V+V  +IA +I +PVGIW      +S+ ++P    +   PA
Sbjct: 75  FAFLDSLELWEDSMVTLALVIVATVIALVISVPVGIWAARSDRVSAMVRPVLDFMQTLPA 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            ++    +  + ++   P   +   +IF     +    + G      +  E A +F  T 
Sbjct: 135 MIYL---IPAILFFGTGPAPGIVATLIFALAPGVRMTEL-GIRQVDKELVEAAEAFGTTP 190

Query: 491 WRWWRYIILPGIFPYYVTG 509
                 + LP   P  + G
Sbjct: 191 RNTLLRVQLPLALPTVMAG 209


>gi|27378302|ref|NP_769831.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351449|dbj|BAC48456.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 301

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 14/174 (8%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+ +   +A+I+ +P+G+ +G    +   I P A++L   PA  + P+ +       L P
Sbjct: 114 RIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAI------MLWP 167

Query: 449 NLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
               S++ I   G+ + IL N + G S         A          +R +  P   P+ 
Sbjct: 168 TNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPASLPHI 227

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            TG     G AW + I +E+ S  +      G+G +  E+     + ++ LG++
Sbjct: 228 FTGLTVGMGVAWVSLIAAEMISGQY------GIGYFTWEAYSLVQYADIALGMI 275


>gi|225686270|ref|YP_002734242.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|256043365|ref|ZP_05446298.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111625|ref|ZP_05452620.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256262594|ref|ZP_05465126.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260564570|ref|ZP_05835055.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|225642375|gb|ACO02288.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|260152213|gb|EEW87306.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|263092380|gb|EEZ16633.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|326410629|gb|ADZ67693.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326553921|gb|ADZ88560.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 272

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 221 GAQY----GVGSYILEARSLYDLEKLFAGVAILSVMGLI 255


>gi|218549545|ref|YP_002383336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218357086|emb|CAQ89719.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
          Length = 385

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  L+G Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGLNGAQRFLHVQLPLALP 310


>gi|254436896|ref|ZP_05050390.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198252342|gb|EDY76656.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 310

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164
           P +G   + V +F    P    +IG    A +AI  +  W  T F M      L +IP  
Sbjct: 145 PQIGLFNYAVTFFTGGDPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 204

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + E +   R S W++FW + +P ++P L+
Sbjct: 205 IYEAAECDRASKWRQFWTITIPMALPFLM 233


>gi|182440129|ref|YP_001827848.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178468645|dbj|BAG23165.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 275

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  +++  NV AG         E   S  +  W   R+++LPG  P  +TG   + 
Sbjct: 146 LIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSL 205

Query: 515 GGAWNASIVSE 525
             AW A +  E
Sbjct: 206 ATAWLALVFGE 216


>gi|71083984|ref|YP_266704.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71063097|gb|AAZ22100.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 717

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L A  +S LF   +  +A KS+R+   L PIL +MQ++P    L   +V F        
Sbjct: 207 ILVAAPLSFLFGLTFGVMAFKSKRVEKFLYPILLVMQTMPQYAVLVPAIVLFG------- 259

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           IG   A I  +  + V  M       L  IP ++ E  R    + WQ
Sbjct: 260 IGDHAAVIITMVVA-VPPMILLTLLGLRGIPSEVIEAGRMSGCNNWQ 305


>gi|317054032|ref|YP_004118057.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952027|gb|ADU71501.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 245

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)

Query: 73  LSAMVISLLFT----FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ +V++LL       V A L A S  +  +L P++   Q+IP+       V++      
Sbjct: 57  LAEIVLALLLGVGAGIVLAVLMAGSPTVRRLLFPLVTASQAIPVFALAPLLVLWLGFGIA 116

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+ A L   F         +  S++  LC  P    E++++   S  + FW +  P +
Sbjct: 117 SKVVVAALILFF--------PLCLSLFDGLCRTPPGWIELAQTLNASRLRLFWQVRWPAA 168

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           +P     + M++      V+A   +V+G+ V    G+G
Sbjct: 169 LPQFFSGLQMAV------VLAPIGVVIGEWVGASEGLG 200


>gi|90414042|ref|ZP_01222026.1| putative ABC transporter permease protein [Photobacterium profundum
           3TCK]
 gi|90324964|gb|EAS41485.1| putative ABC transporter permease protein [Photobacterium profundum
           3TCK]
          Length = 273

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+IP+       +++       K++ A L   F +        T   Y  L 
Sbjct: 114 LLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFFPV--------TTCCYDGLR 165

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           + P    +++++   S WQ   ++ +P ++P L   + +++      VVA    VVG+ V
Sbjct: 166 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 219

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + ++  ++A L +L      ++    LL +  I W +K
Sbjct: 220 GSSEGLG-YLMLQANARMMIDEMFAALLILATFSITLYFAADLLLKRAIPWQSK 272


>gi|307823541|ref|ZP_07653770.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
 gi|307735526|gb|EFO06374.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
          Length = 248

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 23/193 (11%)

Query: 361 WQSIGYIVNHFTY---QDVLYVIWLGCI----------TMFRVVVLIIIASIIWIPVGIW 407
           WQ +   +N  T    + V  V WLGC+          T+ R+VV   +A ++   +GI 
Sbjct: 20  WQGVAVYLNSNTLPTPEAVAKVFWLGCVSGQLPFHLGVTLLRLVVSFSVAMLLGCAIGIV 79

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    + +    +  +    PA V    ++ C  ++ L  +  + L ++      ++  
Sbjct: 80  LGRNKKLDAFFDNWLVIFLNIPALV---TIILCYVWFGLVESAAI-LAVVINKLPNVIVT 135

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G  A   D  ++A  +H    +   ++I P + P+ +    +     W   +V E+ 
Sbjct: 136 IREGTRALDQDLLDMARCYHFGKRKTLIHVIWPQLHPFVMGATRSGLALIWKIILVVELL 195

Query: 528 SWGHIHLRTTGLG 540
                  R+ G+G
Sbjct: 196 G------RSNGMG 202


>gi|317047816|ref|YP_004115464.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949433|gb|ADU68908.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 254

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 9/185 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R ++  ++A++I +P+G+ +G    +   ++       + P++   PL +       
Sbjct: 62  TLYRTLMAFVVAAVIGVPLGVMLGSSERLYRSVEFLVDFFRSTPSSALIPLFMLIFGITD 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N       +  F     ILFN   G           A    ++ W  ++ I+L    P 
Sbjct: 122 TNK----IAIAAFAAVLVILFNSAYGVMNARKTRIMAAQVMGVSRWHVFKDIMLMESLPQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI   F
Sbjct: 178 TFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQLFNIKDMYASILITGAF 232

Query: 566 VLALN 570
              LN
Sbjct: 233 GYLLN 237


>gi|163747109|ref|ZP_02154465.1| glycine betaine/proline ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161379670|gb|EDQ04083.1| glycine betaine/proline ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 341

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 73/141 (51%), Gaps = 14/141 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S R+   ++P+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ ++
Sbjct: 175 ARSDRVQRSMIPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 233

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +      + +D+ E + +F ++  QK + + +P ++P    G+   +MMS++     
Sbjct: 234 GIRL------VDQDVIEAADAFGMTNRQKLFKVQIPLALPNIMAGVNQTIMMSLA---MV 284

Query: 207 VVASEMIVVGDTVIPLPGIGS 227
           V+AS +   G  V+ L GI S
Sbjct: 285 VIASLVSAPGLGVLVLRGIRS 305


>gi|146341312|ref|YP_001206360.1| putative sugar ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194118|emb|CAL78137.1| putative sugar ABC transporter, permease protein [Bradyrhizobium
           sp. ORS278]
          Length = 351

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F + Q +  +P+DL E +R  + S WQ +W + +P ++P L
Sbjct: 231 FLLRQYMLTLPKDLIEAARMDKASEWQIYWRIVMPLTLPAL 271


>gi|53719435|ref|YP_108421.1| hypothetical protein BPSL1822 [Burkholderia pseudomallei K96243]
 gi|52209849|emb|CAH35821.1| putative membrane protein [Burkholderia pseudomallei K96243]
          Length = 323

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262


>gi|317127058|ref|YP_004093340.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472006|gb|ADU28609.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 300

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 20/138 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
           +L+A ++S++       L AK+     ++ P+LD MQ++P   +L   V +F + + PG 
Sbjct: 120 VLNASILSVIIGVPIGILMAKNNTAEAIIKPVLDFMQTMPAFVYLLPAVAFFSIGMVPG- 178

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      +F S V+    ++      +  + ++L E + +F  +G QK + + +P 
Sbjct: 179 -----------VFASLVFATPPTIRFTNLGIRQVSKELVEAADAFGSTGSQKLFKVELPM 227

Query: 188 S----MPGLVWNMMMSMS 201
           +    M G+   +M+++S
Sbjct: 228 ARATIMAGINQTVMLALS 245


>gi|269792013|ref|YP_003316917.1| binding-protein-dependent transport systems inner membrane
           component [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099648|gb|ACZ18635.1| binding-protein-dependent transport systems inner membrane
           component [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 278

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   ++S + +P GI +G RP +   I P  + +          L+   + ++ 
Sbjct: 83  SLTRIGMGFTMSSAVALPAGILMGLRPRLRRAISPLLEFMRHV---PPLALLPLLILWFG 139

Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +     L+++ +    ++  F N + G         EV  +F ++       I+LP   P
Sbjct: 140 IGEGSKLAVIAL--ASFFPAFINAMEGVMGCDRSLVEVGHAFGLSEREIIGRIVLPYSLP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y + G   A G +W + I +E+ +       ++GLG Y+ +  +  S P+V L
Sbjct: 198 YVLAGLRLALGYSWRSLIGAELLA------ASSGLG-YMIQDAQAMSRPDVAL 243


>gi|256393443|ref|YP_003115007.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM
           44928]
 gi|256359669|gb|ACU73166.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 441

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 36/233 (15%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G AW S+G+ V H            G I     V        I  P+G+ +G    + + 
Sbjct: 236 GDAWPSVGHSVEH------------GAIGFGASVA-------IGTPLGLLVGRVRAVRAG 276

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L + P+  + P     + ++   P + L  +++ G    I   V++G    P 
Sbjct: 277 LGPILSGLQSLPSVAWVP---PALMFFGPKPAM-LYAVVLAGAVPSISVGVVSGLDQVPP 332

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN----ASIVSEVASWGHIH 533
            +  V  +    G    RY++LP   P Y+ G       +W     A I+ E A  GH  
Sbjct: 333 LYLRVGRNLGARGLASVRYVLLPAALPGYLAGLRQGWAFSWRSLLAAEIIVESADLGH-- 390

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                LG  +  + +          ++++    +A+N+ ++ PL     R LR
Sbjct: 391 ----SLGFLLKNAQDSNDMAGAFAAIVLILAVGVAVNQLVFVPLE---RRVLR 436


>gi|213691368|ref|YP_002321954.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522829|gb|ACJ51576.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457440|dbj|BAJ68061.1| sugar ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 289

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R+  MV V  + +     I  F  F     +N Y G +    LA I  +    +WNM 
Sbjct: 116 RGRKAIMVFVLAIQMTSGGIIPQFFIFNQFGLLNKYSGLI----LAYIAMVLPFAIWNM- 170

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                   NIP+D+ E +     + WQ  W +  P + PG+V   + +    W
Sbjct: 171 ---RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPGIVSTSVFAFISAW 220


>gi|167719687|ref|ZP_02402923.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 270

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 98  RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 149

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 150 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 209


>gi|330466133|ref|YP_004403876.1| putative ABC transporter [Verrucosispora maris AB-18-032]
 gi|328809104|gb|AEB43276.1| putative ABC transporter [Verrucosispora maris AB-18-032]
          Length = 282

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++++ G  W IL N I G  A  +   E A SF +T W    +++LP   P  + G    
Sbjct: 149 VVIVSGAVWPILLNTIEGVRATDSVMTETADSFQVTWWERLWFLVLPAASPRIMAGVRQG 208

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              A    ++SE      +   + GLG  IA
Sbjct: 209 LSVALILMVISE------MFASSAGLGYRIA 233


>gi|296394034|ref|YP_003658918.1| binding-protein-dependent transporter inner membrane component
           [Segniliparus rotundus DSM 44985]
 gi|296181181|gb|ADG98087.1| binding-protein-dependent transport systems inner membrane
           component [Segniliparus rotundus DSM 44985]
          Length = 291

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R     ++A +  +P+G+ I + P ++    P  +L          P+ V  +    
Sbjct: 100 SLLRAGAGFVLAVLAGVPLGLAIAWFPRVADSANPVLELFRNTAPLALLPVFVLVLGIGE 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    ++LL   G  + ++ N IAGA +      + A S      + +  ++LPG  P 
Sbjct: 160 TS---KITLLFYSGI-FPVVLNTIAGARSADPLLVKAARSLGFGHMQTFVKVVLPGAVPA 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A      AS V  + +   I  R  GLG  I  +    + P++ +G+L +   
Sbjct: 216 VFTGVRQAA-----ASCVLVLVAAEMIGARA-GLGYLITAAQSSFAIPDMYVGILTIALV 269

Query: 566 VLALNRFL 573
            L LN  L
Sbjct: 270 GLTLNAVL 277


>gi|260663065|ref|ZP_05863958.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
 gi|260552686|gb|EEX25686.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
          Length = 311

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 83/170 (48%), Gaps = 8/170 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVIS--LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--IL 113
           V +LP   +  ++ +L+A+V +   L   ++ T  A  R  G++   +++++  IP  + 
Sbjct: 84  VGALPMIVTSFSVTLLAAVVATPFALAIALFTTELAPKRSRGLIQ-SMVELLVGIPSVVY 142

Query: 114 GFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           GF+   V+     NL+ G   G  L A   +F   +  +T    +SL ++PRD    S +
Sbjct: 143 GFIGLAVLVPVIRNLFGGTGSGI-LTATLVLFVMILPTITSLTIESLRSVPRDYRSASFA 201

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ    + +  ++PG++  ++  M+  +   +A +M++    V+P
Sbjct: 202 LGATMWQTMHRVILRAALPGILTAVIFGMARAFGEALAVQMVIGNAAVMP 251


>gi|89056438|ref|YP_511889.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88865987|gb|ABD56864.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 430

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 4/134 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 239 SLFRVVVGFVLGALVGIPLGYAMGLSNWARGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 298

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   +  +  R++I+P   P 
Sbjct: 299 AGK----IVLLFLAALWIMAIAARAGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSLPE 354

Query: 506 YVTGAITACGGAWN 519
             TGA  A G  W 
Sbjct: 355 IFTGARVAMGVCWG 368


>gi|126441809|ref|YP_001058904.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126221302|gb|ABN84808.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
          Length = 323

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262


>gi|331002262|ref|ZP_08325781.1| hypothetical protein HMPREF0491_00643 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411356|gb|EGG90772.1| hypothetical protein HMPREF0491_00643 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 297

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +FG   Y +   IAG    P D+ E AS   ITG++ +R+II P
Sbjct: 167 VFGNVGYFMMMFIAGIEKIPQDYFEAASLEGITGFQRFRHIIFP 210


>gi|306827362|ref|ZP_07460649.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           pyogenes ATCC 10782]
 gi|304430509|gb|EFM33531.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           pyogenes ATCC 10782]
          Length = 508

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 25/185 (13%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++I+LL     A L ++S+R   +++ +  + Q+IP L  L   +       P   IG 
Sbjct: 29  SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +  
Sbjct: 82  -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138

Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLT--M 248
                MSG    V  S ++++G     ++I   G+GS+I L I   +   IL   ++  +
Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNNANLILIGAISSAL 189

Query: 249 LGVIF 253
           L +IF
Sbjct: 190 LAIIF 194


>gi|296102564|ref|YP_003612710.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057023|gb|ADF61761.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 236

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150
            +R +   ++ I ++  ++P L  L   +V         VIG  +  AI A+F + +  +
Sbjct: 71  AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDTPAIIALFLASLLPI 121

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + Y  LC++P  L E +    ++ WQ+   + +P +     W +M+S
Sbjct: 122 VRNTYAGLCSVPSSLLEAANGIGMTKWQRLRQVELPNA-----WPVMLS 165


>gi|291612563|ref|YP_003522720.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
 gi|291582675|gb|ADE10333.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
          Length = 325

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 4/132 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+SII +P+GI  G    ++   +PF +     PA  F  L V+ +  Y   P +    
Sbjct: 140 VISSIIGVPLGILSGTYSTMARLNEPFIEFFRYLPAPAFGALAVAVLGIYD-APKI---S 195

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +++ GT +  +  V            E A +      R    +++PGI P          
Sbjct: 196 IIVIGTLFQQILIVANTTRKLDPTIVEAALTLGTNRLRMLTRVVVPGILPDLYRDQRILL 255

Query: 515 GGAWNASIVSEV 526
           G AW   IV+E+
Sbjct: 256 GWAWTYLIVAEL 267


>gi|326386847|ref|ZP_08208462.1| taurine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208650|gb|EGD59452.1| taurine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 259

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+A+ +  R+  AM+ +++             R+   L P+++  + +P L +L   
Sbjct: 60  SLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPLI 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F        IG E+  +  I+ +    +  +    +  +  D    +RS   S  Q 
Sbjct: 120 VIWFG-------IG-EVTKVILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQI 171

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            W +  P ++P ++  + +++  GW  +VA+E++
Sbjct: 172 AWLVVFPSALPDILTGLRIALGVGWSTLVAAELV 205



 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           Q +G +V+   +  V   +W     ++ RV + ++ A I  IP G+ +G  P +++ + P
Sbjct: 43  QILGRVVDLARHGFVGASLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDP 102

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             +     P   + PL+V       +   + L  + IF     +     +G      D  
Sbjct: 103 LIEFYRPVPPLAYLPLIVIWFGIGEVT-KVILIYMAIFAP---LAIATASGVRRVDPDRI 158

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A S   +  +    ++ P   P  +TG   A G  W+  + +E+ +       T GLG
Sbjct: 159 RAARSLGASRDQIAWLVVFPSALPDILTGLRIALGVGWSTLVAAELVA------ATRGLG 212

Query: 541 AYIAESTEKGSFPEVVLGVLIMC 563
             +  +++      VV G+L++ 
Sbjct: 213 FMVQSASQMLVTDVVVAGILVIA 235


>gi|310828331|ref|YP_003960688.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612]
 gi|308740065|gb|ADO37725.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612]
          Length = 260

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV+ G      +  E+A+ +H+   R  + I LP + PY+ +  +   G  W +++ SEV
Sbjct: 144 NVVEGIQNTSRNLLEMAALYHVPFKRVLKDIYLPTLKPYFASALMNVIGMGWRSTVTSEV 203

Query: 527 ASWGHIHLRTTGLGAYIAE 545
            +     L + G+  Y A+
Sbjct: 204 LA---NALPSVGMNLYYAK 219


>gi|304389468|ref|ZP_07371431.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315656714|ref|ZP_07909601.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|304327278|gb|EFL94513.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315492669|gb|EFU82273.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 269

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++  I+ +P+   I     +++ +QPF     A PA    PL++     +   P L +++
Sbjct: 88  VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 143

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L      + IL +   G         E A       W   RY+ +P + P  + G     
Sbjct: 144 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 203

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +   ++V E+   GH      G+G  I   +     P + +  LIM C V AL
Sbjct: 204 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 251


>gi|266624053|ref|ZP_06116988.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288864120|gb|EFC96418.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 242

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA-ELAAIFAIFTSQVWNMTFSMYQS 157
           +L P++  +++IP + ++   +V          +G  E + I  IF +    M  ++YQ 
Sbjct: 93  LLEPVVQFIRTIPPIAYIPLVIV---------ALGVDESSKIMVIFIATFLVMVITIYQG 143

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + N+   L + +R    +    F+++ VP S P ++  + + +S G   ++ASE+
Sbjct: 144 VKNVDSTLVKAARVLGANDRDIFFHVVVPASFPFVLTAIRLGLSAGLTTLIASEL 198


>gi|269957314|ref|YP_003327103.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
 gi|269305995|gb|ACZ31545.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
          Length = 289

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L +LSA  I+L+        AA++ R+   L P+LD MQ++P   +L  TVV F+    
Sbjct: 97  ALVLLSA-AIALILAVPLGIWAARNERVSQTLRPVLDFMQTMPGFVYLIPTVVIFLT--- 152

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G V G     IFA+       + F+    +  + +++ E   +F  +  +    + +P +
Sbjct: 153 GPVPGIIATIIFAMAP----GVRFTEL-GIRQVDKEVVEAGHAFGATPGRILRQIQLPLA 207

Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +P    G+   +M+S+S     VV + M+  G       G+G+ +  A++  D+
Sbjct: 208 LPTVMAGVNQVIMLSLS----MVVIAGMVGAG-------GLGNDVVAALQRVDV 250


>gi|330807505|ref|YP_004351967.1| amino acid ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375613|gb|AEA66963.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 217

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 13/201 (6%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +H  +  VL++ W   IT+  + V   +A ++ +P+GI++   P ++  +Q  A +L   
Sbjct: 8   SHLDWPLVLHLTW-QHITLVGIAV--TLAIVVGVPLGIFMTRFPALAGPLQASATVLLTI 64

Query: 429 PANVFFPLVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           P+   F L++   S +   L P   ++ + ++ +   I+ N     +      +E A   
Sbjct: 65  PSIALFGLLLPFYSKFGQGLGPMPAITAVFLY-SLLPIMRNTYLALTGVEPGIREAARGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA     N  +++  A+ G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAV--VMNIGVMTIAATIG-----AGGLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVL 567
             +     +++G +++    +
Sbjct: 177 ISRSDMSMLIVGAVLVSLLAI 197


>gi|315655372|ref|ZP_07908272.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315490312|gb|EFU79937.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 267

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++  I+ +P+   I     +++ +QPF     A PA    PL++     +   P L +++
Sbjct: 86  VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 141

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L      + IL +   G         E A       W   RY+ +P + P  + G     
Sbjct: 142 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 201

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +   ++V E+   GH      G+G  I   +     P + +  LIM C V AL
Sbjct: 202 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 249


>gi|332669862|ref|YP_004452870.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
 gi|332338900|gb|AEE45483.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
          Length = 313

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           FS+Y  L  +P +  E ++    SGWQ+FW + +P   P
Sbjct: 197 FSVYAGLLQVPEETMEAAQLDGASGWQRFWGITIPMMRP 235


>gi|304395788|ref|ZP_07377671.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357082|gb|EFM21446.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 391

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 28/227 (12%)

Query: 57  DVHSLPQYASRTTL------RMLSAMVISLLFTFVYA-----TLAAKSRRLGMVLVPILD 105
           D+  L +YA+R  +      R L+ +V ++L   ++A     TL  +    G V   +L+
Sbjct: 166 DLSLLKEYANRHAVFDAALSRHLTLLVGTILPALMFALPLGVTLFRRPDWQGSVF-GVLN 224

Query: 106 IMQSIP---ILGFLTFTVVYFMNLYPG----KVIGAELA-AIFAIFTSQVWNMTFSMYQS 157
           ++Q++P   + G L   +      +P      + G  +A A+ A+    +  +  S+   
Sbjct: 225 VIQTVPSVALFGLLIAPLAGLAQHFPWLSDWGISGIGMAPALIALVLYALLPLVRSVVVG 284

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P+++ E +R   +SGWQ+F  + VP ++P  VW     ++G    VV +  + V  
Sbjct: 285 LQQVPQEVRESARGTGMSGWQQFVAVDVPLALP--VW-----LAGLRVVVVQTLGMAVVA 337

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            +I   G G+ I   +    L  +L  ++ ++ +  + D  LFR +I
Sbjct: 338 ALIGAGGFGAIIFQGLLSSALDLVLLGVIPVIALAVVIDA-LFRLLI 383


>gi|254471300|ref|ZP_05084702.1| abcb protein [Pseudovibrio sp. JE062]
 gi|211959446|gb|EEA94644.1| abcb protein [Pseudovibrio sp. JE062]
          Length = 256

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 15/163 (9%)

Query: 56  LDVHSLP---QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           +D+ +LP   +Y   T  R  +  +++  F   +  +A  S  L ++  P + +   +P 
Sbjct: 49  IDLVALPSGFEYILITAKRAFAGFLLASAFGISFGLIAGWSNTLSLLCKPFITVALGVPP 108

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + ++   +++F         G +   IF +F S +  +     Q +    ++L+E+++SF
Sbjct: 109 IAWIVLALLWFG--------GDDGTPIFTVFISTLPLIFAGALQGVRMREKELDEMAQSF 160

Query: 173 RLSGWQKFWYLGVPFSMPGL--VWNMMMSMSGGWFFVVASEMI 213
            +   Q+FW +  P  +  L   W   + +S  W  VV +E++
Sbjct: 161 HVPLIQRFWQVQAPQIVSYLFPAWATALGLS--WKVVVMAELL 201


>gi|209884786|ref|YP_002288643.1| taurine transport system permease protein TauC [Oligotropha
           carboxidovorans OM5]
 gi|209872982|gb|ACI92778.1| taurine transport system permease protein TauC [Oligotropha
           carboxidovorans OM5]
          Length = 286

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++I++ IP L ++  ++++    +   +    L + F I  + +          + N+
Sbjct: 126 PIVEILRPIPPLAWIPLSIIWLGVGFKSVLFITTLGSFFPILVATI--------AGVRNV 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            R + E +R+   S  Q    + +P +MP     M +++   W  VVA+EMI V
Sbjct: 178 DRRMIEFARTLGASTGQILLKVVIPAAMPQTFVGMRIAVGFSWMVVVAAEMISV 231


>gi|54302366|ref|YP_132359.1| putative ABC transporter permease protein [Photobacterium profundum
           SS9]
 gi|46915788|emb|CAG22559.1| putative ABC transporter permease protein [Photobacterium profundum
           SS9]
          Length = 292

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L+PIL   Q+IP+       +++       K++ A L   F +        T   Y  L 
Sbjct: 133 LLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFFPV--------TTCCYDGLR 184

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           + P    +++++   S WQ   ++ +P ++P L   + +++      VVA    VVG+ V
Sbjct: 185 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 238

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269
               G+G Y+ L    + ++  ++A L +L      ++    LL +  I W +K
Sbjct: 239 GSSEGLG-YLMLQANARMMIDEMFAALLILATFSITLYFAADLLLKRAIPWQSK 291


>gi|220933131|ref|YP_002510039.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219994441|gb|ACL71044.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 286

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)

Query: 132 IGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           +G    AI+AI  + +W  T F+M     +L  I R+L E +R    + WQ+FWY+ +P 
Sbjct: 146 LGNPDIAIWAIVITNIWFGTPFTMLFLGSALNTISRELYEAARVDGATRWQQFWYVTIPA 205

Query: 188 SMPGLVWNMMM 198
             P +  N+++
Sbjct: 206 LKPFIATNLIL 216


>gi|149203355|ref|ZP_01880325.1| probable sugar ABC transporter, permease protein [Roseovarius sp.
           TM1035]
 gi|149143188|gb|EDM31227.1| probable sugar ABC transporter, permease protein [Roseovarius sp.
           TM1035]
          Length = 315

 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164
           P +G   + V +F    P    +IG    A +AI  +  W  T F M      L +IP  
Sbjct: 150 PQIGLFNYVVAFFTGADPASFSMIGDVNLAPWAIIIADTWMWTPFVMLICLAGLRSIPDS 209

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + E +   R S W++FW + +P ++P L+
Sbjct: 210 IYEAAECDRASKWRQFWTITLPMALPFLM 238


>gi|327478891|gb|AEA82201.1| ABC-type transporter membrane permease component [Pseudomonas
           stutzeri DSM 4166]
          Length = 261

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G   A 
Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 187

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567
           G  W   IV+E  S       + G+G     + E      VVL +L+             
Sbjct: 188 GFMWLTLIVAETIS------ASAGIGYLAMNAREFLQTDVVVLAILLYALLGKLADVAAR 241

Query: 568 ALNR--FLWHPLY 578
            L R    WHP Y
Sbjct: 242 GLERVWLRWHPAY 254


>gi|313901679|ref|ZP_07835111.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313468056|gb|EFR63538.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 296

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +T   +L+A VI++         A++S  L  VL P+LD+MQ++P    L   V++
Sbjct: 90  EPAMQTLALVLAATVIAVGVGIPLGIAASRSAMLRAVLRPVLDLMQTLPAFVHLLPAVLF 149

Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F   + PG +     A   AI  + +          +  +P D+ E  R+F  +  Q   
Sbjct: 150 FGAGVVPGLLATVVFAVPPAIRLTDL---------GIRQVPADVVEAGRAFGSTPNQILR 200

Query: 182 YLGVPFSMP 190
            + +P ++P
Sbjct: 201 KIQLPLALP 209


>gi|189463174|ref|ZP_03011959.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136]
 gi|189430153|gb|EDU99137.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136]
          Length = 266

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A IF +  + +  M + +Y +L  + R   E ++    + +Q FW +  P SMPG+V
Sbjct: 131 GEGALIFGMIYNFIPFMIYPIYNTLQKMDRSYIEAAQDLGANSFQVFWKVIFPLSMPGVV 190

Query: 194 WNMMM 198
             +MM
Sbjct: 191 SGIMM 195


>gi|146282371|ref|YP_001172524.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
 gi|145570576|gb|ABP79682.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
          Length = 271

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 8/155 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + +  R+ S + I+ +        A      G  L P+L ++  +P L  L    + 
Sbjct: 73  QDTASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIV 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           EL+ +  I       +   + Q    IPR+L   +++   + W     
Sbjct: 133 FGL--------GELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILR 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L +P  +P L+ ++ + +   W F++A+E I   D
Sbjct: 185 LVLPQLLPRLLISLRLVLGSAWLFLIAAEAIASTD 219


>gi|134282421|ref|ZP_01769126.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|134246459|gb|EBA46548.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 313

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252


>gi|254179876|ref|ZP_04886475.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184210416|gb|EDU07459.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 313

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252


>gi|329907288|ref|ZP_08274605.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Oxalobacteraceae bacterium IMCC9480]
 gi|327547038|gb|EGF31925.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Oxalobacteraceae bacterium IMCC9480]
          Length = 412

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 28/188 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+++   L+       L A S R   +  P+LD MQ+ P   +L   V+ F     G V
Sbjct: 183 VLTSLAFCLVIGLPLGVLLASSDRAQRLTRPLLDAMQTTPAFVYLVPVVMLFGI---GNV 239

Query: 132 IGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G  +  +FA+    ++ N+     +       DL E +R++  S  Q  + + +P ++P
Sbjct: 240 PGVIVTIVFALPPLVRLTNLGIRQVRP------DLIEAARAYGASPAQMLFKVQLPLALP 293

Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
               G+   +M+S+S     VV + MI VG       G+G  +   I   D+     A +
Sbjct: 294 SIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATV 339

Query: 247 TMLGVIFL 254
             LG++ L
Sbjct: 340 GGLGIVLL 347


>gi|323127201|gb|ADX24498.1| glycine betaine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 508

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 25/185 (13%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++I+LL     A L ++S+R   +++ +  + Q+IP L  L   +       P   IG 
Sbjct: 29  SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +  
Sbjct: 82  -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138

Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLT--M 248
                MSG    V  S ++++G     ++I   G+GS+I L I   +   IL   ++  +
Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNNANLILIGAISSAL 189

Query: 249 LGVIF 253
           L +IF
Sbjct: 190 LAIIF 194


>gi|307326565|ref|ZP_07605759.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306887759|gb|EFN18751.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  +++  NV AG         E  ++  +  W   R+++LPG  P  +TG   + 
Sbjct: 140 LIALGVTFHLYLNVYAGIRGVDAQLIEAGTALGLGRWGLIRHVVLPGALPGAMTGLRYSL 199

Query: 515 GGAWNASIVSE 525
             AW A +  E
Sbjct: 200 ATAWLALVFGE 210


>gi|254460099|ref|ZP_05073515.1| taurine ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206676688|gb|EDZ41175.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 436

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ IP L  +   +++F        IG E+  I  +F + +W M  +    +  +
Sbjct: 279 PIVEFMRPIPPLALIPLIIIWFG-------IG-EIGKIVLLFLAALWIMIIAARSGVSGV 330

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  + S   S WQ    + VP S+P +     ++M   W  VVA+E++        
Sbjct: 331 AITKVHAAYSLGASKWQILGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAANV---- 386

Query: 222 LPGIGSYIALAIKEQ 236
             G+G  I  A K Q
Sbjct: 387 --GLGKMIVTASKFQ 399


>gi|162451650|ref|YP_001614017.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161162232|emb|CAN93537.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 281

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 10/149 (6%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR+ +  V + L       LA   R +  ++ P  + ++ +P+   +   ++        
Sbjct: 90  LRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEFLRYVPVPALIPLVMI-------A 142

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             IG E A +  +F    + +       +  +P  L +VS+S   +  +  W +  P ++
Sbjct: 143 AGIG-EGAKVLLVFLGTFFQLLLMTADEVRRVPAPLLQVSQSLGATRREIVWRVLAPAAL 201

Query: 190 PGLVWNMMMSMSG-GWFFVVASEMIVVGD 217
           PG +W+ +   +G  W +VV +E++   +
Sbjct: 202 PG-IWSALRMCNGWAWSYVVVAELVAATE 229


>gi|21225809|ref|NP_631588.1| ABC-transport protein, membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|289767037|ref|ZP_06526415.1| ABC-transporter [Streptomyces lividans TK24]
 gi|7799280|emb|CAB90902.1| putative ABC-transport protein, membrane component [Streptomyces
           coelicolor A3(2)]
 gi|289697236|gb|EFD64665.1| ABC-transporter [Streptomyces lividans TK24]
          Length = 267

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   IF IF +       S +Q + N+ R L   +R         F  + VP S P ++ 
Sbjct: 135 ETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPASTPFILV 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M + +   W  +VA+E+I   +      G+G  +  A    DL  I   ++++  +  L
Sbjct: 195 GMRVGLGSAWATLVAAELIAAQE------GLGYRMQNAQLYYDLPTIFVGLISIGILGLL 248

Query: 255 YDQLLF---RPMIVWSNK 269
            D++L    R +  W  +
Sbjct: 249 MDRVLLLAERRLTRWQER 266


>gi|327480625|gb|AEA83935.1| ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166]
          Length = 271

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 8/155 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + +  R+ S + I+ +        A      G  L P+L ++  +P L  L    + 
Sbjct: 73  QDTASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIV 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           EL+ +  I       +   + Q    IPR+L   +++   + W     
Sbjct: 133 FGL--------GELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILR 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L +P  +P L+ ++ + +   W F++A+E I   D
Sbjct: 185 LVLPQLLPRLLISLRLVLGSAWLFLIAAEAIASTD 219


>gi|317055240|ref|YP_004103707.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
 gi|315447509|gb|ADU21073.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
          Length = 306

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 12/184 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++M  +    ++A I  IP+G+++G+   +    +  A  L + P  VF P  ++ +  
Sbjct: 115 AVSMITITTGYVLALITAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALLPT 174

Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +        S+ +IF T ++ IL   ++G         E A  F  +       ++LP  
Sbjct: 175 FK-----SCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKTYMLYSVLLPAS 229

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G    C      S +  + +   +    +G+G YI   T  G+F  +++G++ +
Sbjct: 230 LPQIFDG----CNMGLLLSFI--LLTSAEMIGGNSGIGFYIQYYTNFGNFTRIMVGIVFL 283

Query: 563 CCFV 566
              V
Sbjct: 284 GTIV 287


>gi|218961821|ref|YP_001741596.1| Hydroxymethylpyrimidine transport system permease protein
           [Candidatus Cloacamonas acidaminovorans]
 gi|167730478|emb|CAO81390.1| Hydroxymethylpyrimidine transport system permease protein
           [Candidatus Cloacamonas acidaminovorans]
          Length = 259

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 21/206 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   T +  +S ++IS++   + A     SR +  ++ P L I Q++PI+      +++
Sbjct: 53  HHLKPTLIEAISGLLISIVLGSITAIAMNLSRLIKQIIYPYLIISQTVPIIAVAPLLIIW 112

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G  I A+   IFA+     + +   +Y    ++  D   +  S   + ++ F  
Sbjct: 113 F-----GYGISAK---IFAVVLMCFFPIALGLYDGFRSVSIDQIRLLTSMGATPYKIFRL 164

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P ++P     + +S +   + V+ +   V+G+ +    G+G Y+  A        I 
Sbjct: 165 LKIPSALPNFFTGLKLSAT---YSVMGA---VIGEWLGGTSGLGIYMTRATNVHQTAHIF 218

Query: 243 YAM-------LTMLGVIFLYDQLLFR 261
             +       L + G++ L D++L +
Sbjct: 219 AVIIVFVAVSLALFGIVALLDRILLK 244


>gi|305390407|gb|ADM52730.1| ABC transporter [Paenibacillus sabinae]
          Length = 164

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 13/122 (10%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I+F+ ++G      D  + A SF ++  R    ++LP  FP  +TG   A G A    
Sbjct: 46  WPIMFSTLSGMIHADADTVKAARSFGLSRLRLTTKVLLPLAFPSILTGTRLAAGYALLFL 105

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN-------RFLW 574
           I +E+         T+GLG  I  +       ++  GVLI+    + L+       + L 
Sbjct: 106 IAAEMMG------STSGLGFMIYTAQANYQIVQMFSGVLIIAVLAIVLDGIMSAAGKRLV 159

Query: 575 HP 576
           HP
Sbjct: 160 HP 161


>gi|260460056|ref|ZP_05808309.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034267|gb|EEW35525.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 255

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 17/200 (8%)

Query: 356 AIGIAW------QSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWI 408
           A G+ W       S G +            +WL    +M+R+ +  +IAS + IP+G+ I
Sbjct: 26  ATGLGWVKPIFLPSPGSVATQIVKLATEGTLWLDLRASMYRISIGFLIASALSIPIGVLI 85

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G      + I+P    +   P   F PL +     +    +    L++  GT +  +  +
Sbjct: 86  GSFRSWEAAIEPLVDFIRYMPVVAFVPLSI----LWAGTGDTQKFLIIFIGTFFQQVLMI 141

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +      P DF  +  +  +   +    I++P   P        + G AW   +++E+ +
Sbjct: 142 MDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLRISLGWAWTWLVLAELVA 201

Query: 529 WGHIHLRTTGLGAYIAESTE 548
                  T+GLG  I  S  
Sbjct: 202 ------ATSGLGYRITVSQR 215


>gi|83645026|ref|YP_433461.1| spermidine/putrescine ABC transporter membrane protein [Hahella
           chejuensis KCTC 2396]
 gi|83633069|gb|ABC29036.1| ABC-type spermidine/putrescine transport system, permease component
           I [Hahella chejuensis KCTC 2396]
          Length = 288

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 33/66 (50%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P ++I  E A +F +    +  M   +  S   + +DL E         WQ+F+++ +P 
Sbjct: 142 PIQMIYTEFAVVFGLTYILLPFMALPLISSFDKLDKDLIEAGHDLGAGFWQRFYHIVLPL 201

Query: 188 SMPGLV 193
           +MPG+V
Sbjct: 202 TMPGVV 207


>gi|325266979|ref|ZP_08133649.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
 gi|324981479|gb|EGC17121.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
          Length = 505

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I+Q+IP L  L   + +     P  +I   L A+  IF +         Y  L  I + 
Sbjct: 56  NILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN--------TYLGLTQIDQS 107

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +++   +F LS WQ  W + +P ++P ++
Sbjct: 108 IQDAYTAFGLSRWQSLWRIELPMALPAMI 136


>gi|312967421|ref|ZP_07781636.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 2362-75]
 gi|312287618|gb|EFR15523.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 2362-75]
          Length = 235

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 65  LLNVIQTVPSIALFGLLIAPLAALVTAFPWLGMLGIAGTGMTPALIALVLYALLPLVRGV 124

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 125 VVGLNQIPRDVLESARAMGMSGVQRFLHVQLPLALP 160


>gi|118581559|ref|YP_902809.1| binding-protein-dependent transport systems inner membrane
           component [Pelobacter propionicus DSM 2379]
 gi|118504269|gb|ABL00752.1| binding-protein-dependent transport systems inner membrane
           component [Pelobacter propionicus DSM 2379]
          Length = 742

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 14/108 (12%)

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+PR+L   S +   S WQ  W + +P ++PG+   +M+    G+   +   MIV+
Sbjct: 614 DAISNVPRNLTAASLALGASRWQTAWRVVLPSALPGVFSAVMI----GFGRAIGETMIVL 669

Query: 216 ---GDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
              G+T I        L  + + IA+ I E  L   LY +L +  V+ 
Sbjct: 670 MATGNTPIMSWSIFNGLRSLSANIAVEIPEAPLDGSLYRVLFLSAVLL 717


>gi|326780797|ref|ZP_08240062.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326661130|gb|EGE45976.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 296

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+  G  +++  NV AG         E   S  +  W   R+++LPG  P  +TG   + 
Sbjct: 167 LIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSL 226

Query: 515 GGAWNASIVSE 525
             AW A +  E
Sbjct: 227 ATAWLALVFGE 237


>gi|239820192|ref|YP_002947377.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239805045|gb|ACS22111.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 256

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 15/161 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L   + P+++  +++P +  +   +VYF        IG E A    +F +  +     
Sbjct: 90  RGLRSFMDPVINFFRALPPIALIPLVIVYFG-------IG-EAAKTAILFYASFFAGVIV 141

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           MY+ +  I     +V+R+   S  + F  + VP ++P ++  + +++   W  +VASE+I
Sbjct: 142 MYEGIAQISPIYIKVARTLGASDVEIFGKVIVPLTIPHILTAVRVALGVAWATLVASELI 201

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                     G+G+ I  A      L I+Y  +  +GVI L
Sbjct: 202 AAQQ------GLGALIQNA-SSFFQLDIIYVGIICIGVIAL 235


>gi|220919715|ref|YP_002495018.1| choline ABC transporter, permease protein [Methylobacterium
           nodulans ORS 2060]
 gi|219952135|gb|ACL62526.1| choline ABC transporter, permease protein [Methylobacterium
           nodulans ORS 2060]
          Length = 285

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 25/166 (15%)

Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           P+LD+MQ+IP   +L  T+V F + + PG +     A    I  +Q+          + +
Sbjct: 131 PLLDLMQTIPTFVYLIPTLVLFGLGMVPGIISTVIFALPAPIRLTQL---------GISS 181

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216
           +P  L E + ++  +  Q  + + +P +MP    G+   +M+S+S          M+V+ 
Sbjct: 182 VPESLREAALAYGATRTQMLFKVELPSAMPTILAGVTQCIMLSLS----------MVVIA 231

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             ++   G+G  +  A+   ++     A L ++ +  + D++  RP
Sbjct: 232 -ALVGADGLGKPVVRALNTVNIAMGFEAGLAIVVLAIILDRVCKRP 276


>gi|89070895|ref|ZP_01158130.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Oceanicola granulosus HTCC2516]
 gi|89043534|gb|EAR49745.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Oceanicola granulosus HTCC2516]
          Length = 345

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 14/117 (11%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AA   RL   + P+LD+MQ++P   +L   +V+F + + PG +     A +  +  + + 
Sbjct: 184 AAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 237

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201
            +T   Y  + + P  L E +R+F  +  Q  +   +P++ P    GL   +M+S+S
Sbjct: 238 RLT---YLGVSSTPPALLEAARAFGATPRQTLFKAELPYAFPQIMAGLNQTIMLSLS 291


>gi|296102566|ref|YP_003612712.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057025|gb|ADF61763.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 215

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      ++  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|154243924|ref|YP_001409497.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154163046|gb|ABS70261.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 257

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N+ R L EV  +   + WQ  W + +P S P +     + +  GW  +VA+EMI  G +V
Sbjct: 147 NVERSLWEVGETLGGNRWQLVWKIVLPSSAPTIAAGARLGLGIGWACIVAAEMI-GGASV 205

Query: 220 IPLPGIGSYI 229
               GIGS I
Sbjct: 206 ----GIGSMI 211


>gi|149204707|ref|ZP_01881671.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius sp. TM1035]
 gi|149141816|gb|EDM29868.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius sp. TM1035]
          Length = 494

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 388 FRVVVLIIIASI----IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            + V L+  ASI    I IP+GIW        +  QP    +   PA V+    +  +++
Sbjct: 308 MQTVALLGAASILCIVIGIPLGIWFARSKTAFAIAQPILDFMQTMPAFVYL---IPVIAF 364

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       +   +IFG    I    + G +    D KE A ++  T W+  R + LP
Sbjct: 365 FGTGKPPGIIATLIFGMPPVIRLTTL-GLTGVAEDVKEAARAYGATEWQVLRGVELP 420


>gi|114562993|ref|YP_750506.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella frigidimarina NCIMB 400]
 gi|114334286|gb|ABI71668.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella frigidimarina NCIMB 400]
          Length = 283

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 23/153 (15%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           A +S R+  +L PILD MQ+ P   +L   V+ F     G   G     IFA+    V  
Sbjct: 117 AGRSDRVNNILRPILDAMQTTPAFVYLVPIVMLF---SIGNTAGVLATIIFAL-PPLVRL 172

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
            +  + Q    +  +L E + +F  +  Q    + +P ++P    GL   +MMS+S    
Sbjct: 173 TSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLS---- 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            VV + MI  G       G+G+ + L +   D+
Sbjct: 225 MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250


>gi|325677667|ref|ZP_08157319.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324110635|gb|EGC04799.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 306

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 12/184 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++M  +    I+A I  IP+G+++G+   +    +  A  L + P  VF P  ++ +  
Sbjct: 115 AVSMITITTGYILALITAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALLPT 174

Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +        S+ +IF T ++ IL   ++G         E A  F  +       ++LP  
Sbjct: 175 FK-----SCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKPYMLYSVLLPAS 229

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G    C      S +  + +   +    +G+G YI   T  G+F  +++G++ +
Sbjct: 230 LPQIFDG----CNMGLLLSFI--LLTSAEMIGGNSGIGFYIQYYTNFGNFTRIMVGIVFL 283

Query: 563 CCFV 566
              V
Sbjct: 284 GTIV 287


>gi|223042145|ref|ZP_03612316.1| spermidine/putrescine transport system permease protein PotB
           [Actinobacillus minor 202]
 gi|223017084|gb|EEF15525.1| spermidine/putrescine transport system permease protein PotB
           [Actinobacillus minor 202]
          Length = 286

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 144 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFIRVTIPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224
           +MPG+V   ++ +  + G F+V  ++++  G T  PL G
Sbjct: 204 TMPGIVSGCLLVLLPAMGMFYV--ADLLGGGKT--PLVG 238


>gi|167815902|ref|ZP_02447582.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
          Length = 277

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 105 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 157 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 216


>gi|260430953|ref|ZP_05784924.1| glycine betaine/proline ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414781|gb|EEX08040.1| glycine betaine/proline ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 713

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI D++Q+IP+  FL   ++ F        IG E +A  AI    +  M       L N 
Sbjct: 533 PICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGLVNT 584

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P ++ E + S   + WQ    +  P++ P ++  +  ++      + A  M+V+   +I 
Sbjct: 585 PDEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 637

Query: 222 LPGIGSYIALAIKEQDL 238
             G+G  I LA+ + D+
Sbjct: 638 TTGLGQSIYLALGQADV 654


>gi|227494339|ref|ZP_03924655.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces coleocanis
           DSM 15436]
 gi|226832073|gb|EEH64456.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces coleocanis
           DSM 15436]
          Length = 270

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 37/80 (46%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E   IF IF +   +   S +Q + N+ + L   +R       + F  + VP S P ++
Sbjct: 137 GEQPKIFVIFLAAFLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFIL 196

Query: 194 WNMMMSMSGGWFFVVASEMI 213
             M + +   W  VVA+E+I
Sbjct: 197 VGMRVGLGSAWATVVAAELI 216


>gi|241206618|ref|YP_002977714.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860508|gb|ACS58175.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 278

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 23/182 (12%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I + F P +   + P        P     PLVV    +  L P + L  L+ F   + +L
Sbjct: 103 ILMDFVPFMRRALLPVFIASQTLPLVAIAPLVVLWFGF-GLLPKILLVALVTF---FPLL 158

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             ++ G  +   D  E+  S   + WR +R   LP   PY+  G   +   A   +I +E
Sbjct: 159 VALLQGYESTDRDIAELLYSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAE 218

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSF-PEVVL------GVLIMCCFVLAL--NRFL--W 574
            A          GLG YI  +  K +F P++VL       VL +C F L L   R +  W
Sbjct: 219 YAGAAR------GLGIYILNA--KNNFRPDLVLAAVIVSAVLTLCLFGLTLMIQRLVMPW 270

Query: 575 HP 576
            P
Sbjct: 271 QP 272


>gi|170743816|ref|YP_001772471.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168198090|gb|ACA20037.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 244

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA       +E+A +F      W R+++LP + P+ V  A +    AW   +V E+    
Sbjct: 136 GARGLDPGLQEMAQAFRFDRRTWIRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG-- 193

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
               R  G+G  I+   +      ++   L+    +LA++  L  PL  +  R
Sbjct: 194 ----RPNGVGYAISYYFQLFDVAALIGYSLVFSAVMLAVDLLLLQPLDAHVRR 242


>gi|52081951|ref|YP_080742.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus licheniformis ATCC 14580]
 gi|52787335|ref|YP_093164.1| OpuCB [Bacillus licheniformis ATCC 14580]
 gi|319647814|ref|ZP_08002032.1| OpuCB protein [Bacillus sp. BT1B_CT2]
 gi|52005162|gb|AAU25104.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Bacillus licheniformis ATCC 14580]
 gi|52349837|gb|AAU42471.1| OpuCB [Bacillus licheniformis ATCC 14580]
 gi|317390155|gb|EFV70964.1| OpuCB protein [Bacillus sp. BT1B_CT2]
          Length = 217

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 58/116 (50%), Gaps = 8/116 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+++ ++F      +  + ++   V++ +++I+Q++P L  L F   +   L  GK+   
Sbjct: 29  AVLLGIIFAVPLGVVLTRMKKGAGVVIGVVNIIQTLPSLAILAF---FIPLLGVGKI--- 82

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              AI A+F   V  +  + Y  +  + ++L E  +   ++ W++   + +P S+P
Sbjct: 83  --PAIVALFFYSVLPILRNTYTGVKGVNQNLLESGKGIGMTAWEQIRLVELPLSVP 136


>gi|319796043|ref|YP_004157683.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315598506|gb|ADU39572.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 268

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 12/123 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L    A V  +L +F++     +S+R+   L P   ++Q  PI+      +++  N  
Sbjct: 72  TVLSFALATVAGVLISFLFV----QSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPV 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + A L A+F I +    N T      L +I  DL+   +  R + WQ+   L +P 
Sbjct: 128 AAMTVCAALVALFPIIS----NTTL----GLRSIDPDLQSYFKLNRATRWQQLVRLRIPS 179

Query: 188 SMP 190
           ++P
Sbjct: 180 ALP 182


>gi|299770776|ref|YP_003732802.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. DR1]
 gi|298700864|gb|ADI91429.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. DR1]
          Length = 259

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------- 454
           +P+G+ +G  P +++ + PF Q L   P     PLVV           +WL +       
Sbjct: 84  VPLGLLMGRSPVLNAILDPFVQFLRPIPKIALIPLVV-----------VWLGIGEESKFF 132

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+   T   ++    A +   P    + A +  +        +ILP   P   T    + 
Sbjct: 133 LIFIATLLSVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSLPEIFTTIRLSI 192

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           G  W + I +E+ +       T+GLG  I  +        V++G++++
Sbjct: 193 GIGWTSLIAAEMVA------ATSGLGWMIINAGSYLRTDVVIVGIILL 234



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  +S  L  +L P +  ++ IP +  +   VV+         IG E +  F IF + + 
Sbjct: 89  LMGRSPVLNAILDPFVQFLRPIPKIALIPLVVVWLG-------IGEE-SKFFLIFIATLL 140

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           ++      +  N+P  L + +++  L      + + +P S+P +   + +S+  GW  ++
Sbjct: 141 SVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSLPEIFTTIRLSIGIGWTSLI 200

Query: 209 ASEMI 213
           A+EM+
Sbjct: 201 AAEMV 205


>gi|209550618|ref|YP_002282535.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536374|gb|ACI56309.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 375

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V+  L  F  A LA +   L   L+PI +++ ++PI+G     V++F   +P K     +
Sbjct: 189 VVGCLSGFAVAVLADRITFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSKAAVVII 248

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              F +  + V  +  S      ++ RDL    R++  S WQ    L +P +MP
Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294


>gi|298346827|ref|YP_003719514.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063]
 gi|298236888|gb|ADI68020.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Mobiluncus curtisii ATCC 43063]
          Length = 267

 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++  I+ +P+   I     +++ +QPF     A PA    PL++     +   P L +++
Sbjct: 86  VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 141

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L      + IL +   G         E A       W   RY+ +P + P  + G     
Sbjct: 142 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 201

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +   ++V E+   GH      G+G  I   +     P + +  LIM C V AL
Sbjct: 202 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 249


>gi|28378074|ref|NP_784966.1| sugar ABC transporter, permease protein (putative) [Lactobacillus
           plantarum WCFS1]
 gi|308180256|ref|YP_003924384.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28270908|emb|CAD63813.1| sugar ABC transporter, permease protein (putative) [Lactobacillus
           plantarum WCFS1]
 gi|308045747|gb|ADN98290.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 276

 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           + FV+     +     +VL  ++   ++  I  F T   ++ +N Y   VI   L + F 
Sbjct: 95  YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF          + Q+   IPRDL+E +    LS WQ +  + +P+S   L+     S  
Sbjct: 154 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 204

Query: 202 GGW 204
           G W
Sbjct: 205 GSW 207


>gi|292670600|ref|ZP_06604026.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
 gi|292647766|gb|EFF65738.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
          Length = 247

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 94/204 (46%), Gaps = 23/204 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++V +  A +   P+G+ +G+ P ++  + P   L    P     P+V+       
Sbjct: 57  SLMRIMVGLFAAVVAGYPIGVLMGYFPRVNRLLAPILYLSYPIPKIALLPVVMLLFGVGE 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPND----FKEVASSFHITGWRWWRYIILPG 501
            +  L + L+++F     ++  V    +A P++     + + +SF     +  R+IILP 
Sbjct: 117 TSKLLLVFLIIVFQ----VVVAVRDAIAAIPSETYFPLRVLGASFT----QLVRHIILPA 168

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P ++T    A   A +    +E  ++G  +    G+G YI ++  + ++ ++  G++ 
Sbjct: 169 SLPKFITAVRVAMATAISVLFFTE--TFGTQY----GIGYYIMDAWLRVNYLDMYAGIV- 221

Query: 562 MCCFVLALNRFLWHPLYLYGTRCL 585
               VL++  FL+  L  +  R L
Sbjct: 222 ----VLSMMGFLFFVLLDFAERRL 241


>gi|282857566|ref|ZP_06266792.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455]
 gi|282584602|gb|EFB89944.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455]
          Length = 345

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 12/171 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI  G+  +++  I+PF +LL A P+  + P+V+   +          S+ +I    WY
Sbjct: 173 TGIACGYNRNVNYWIEPFTRLLGAIPSTTWLPVVMVLAATLFRG-----SVFIIALGVWY 227

Query: 464 -ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +      G +     + E A +  + G R    I +P   P  + G       A  A +
Sbjct: 228 SVTIATKTGITNIDPAYFEAARTLGVKGMRLVGAIAVPSALPNILQGMTQGMSTACVALM 287

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI        +  +   V+ +C   + +N  L
Sbjct: 288 VAEMIG------VESGLGWYITWQKSWARYGNMYAAVVAICVIFVLVNALL 332


>gi|239983649|ref|ZP_04706173.1| ABC transporter permease protein [Streptomyces albus J1074]
          Length = 264

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++  G  + +  NV AG         E   S  ++ W   R+++LPG  P  +TG   + 
Sbjct: 135 IITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 194

Query: 515 GGAWNASIVSE 525
           G AW A + +E
Sbjct: 195 GIAWLALVFAE 205


>gi|297559634|ref|YP_003678608.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844082|gb|ADH66102.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 322

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVV 121
           Q+   +    ++++ +    + + A   A+ R RL    + +L ++Q +P+   +    +
Sbjct: 107 QFLGNSLFLTVASVAMGAFLSLLAAVAVARFRFRLRTAFIILLLVIQMVPMEAMIISIFI 166

Query: 122 YFMNLYPGKVIGAEL----AAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSG 176
            F  L    V G EL    + +  ++T+    +T  M +  +  +P++LEE +     S 
Sbjct: 167 NFRQL--SDVSGVELLGNLSGLLIVYTAVSLPITIMMLRGFVAAVPKELEEAAAIDGASS 224

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           W  FW + +P   PGLV   + +    W
Sbjct: 225 WTVFWRILMPLVAPGLVAASIFAFITAW 252


>gi|251800143|ref|YP_003014874.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547769|gb|ACT04788.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 264

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           K+ RL   L P L +++++P L      +++F      K++     A F ++ +      
Sbjct: 96  KAERL---LDPSLQLLRTLPHLAVAPLFILWFGFGETSKILLIAKGAFFPLYVNA----- 147

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
              +  + ++ R+L +V+R    + WQ    L +P S+P L   + +S++  W  +V +E
Sbjct: 148 ---FLGVRSVDRNLFDVARVLEFTRWQTITKLILPASLPSLFLGIRLSIAVSWLGLVVAE 204

Query: 212 MI 213
           M+
Sbjct: 205 MM 206


>gi|154686758|ref|YP_001421919.1| YqgH [Bacillus amyloliquefaciens FZB42]
 gi|154352609|gb|ABS74688.1| YqgH [Bacillus amyloliquefaciens FZB42]
          Length = 309

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +     S+ 
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIGSFKSSGTGHSLLAGTIVLSVMILPTVTSIS 184

Query: 156 -QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L ++P+ L + S +   + WQ    + +P + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADALASLPKHLRDGSYALGATRWQTIRKVLIPAAFPTLLTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               ++P
Sbjct: 245 GNTKLLP 251


>gi|328883293|emb|CCA56532.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces venezuelae ATCC 10712]
          Length = 228

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++IA ++ +P+ + +  RP  +  +     LL   P+   F L+   + ++ L+  L
Sbjct: 37  VVSVLIALVVAVPLALLVRARPRFAGPVLGLTTLLYTIPSLAMFSLL---LPFFGLSAAL 93

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            ++ L+++     ++ N +AG ++ P + +E A        R    + LP   P  + G
Sbjct: 94  VVTGLVLYALT-ILVRNTLAGLASVPAETREAARGMGYGSLRLLWQVELPLALPVLMAG 151


>gi|323940801|gb|EGB36989.1| inner membrane transport system [Escherichia coli E482]
          Length = 302

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 132 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGV 191

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 192 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 227


>gi|312139011|ref|YP_004006347.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888350|emb|CBH47662.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 271

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAEL 136
           +SL+  +  A L   S  L    VP+  + Q++PI+      +++F   L P KV+   L
Sbjct: 83  VSLVVAWALAILVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIAL 141

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           A  F         M   + +   +  R+   + RS   S WQ+F Y+ +P ++P
Sbjct: 142 ATFF--------PMAIGLIEGFASADREAGALLRSMGASKWQQFRYVRLPSALP 187


>gi|323526143|ref|YP_004228296.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323383145|gb|ADX55236.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 274

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 17/202 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           FT  ++   +W   IT+   V+   + + I + VG+W+   P  S+   P+ +   + P 
Sbjct: 65  FTSGEIYLHLW---ITLLETVLAFALGTGIGLGVGLWLALSPLASALFDPYIKAANSMPR 121

Query: 431 NVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            +  P+      ++ L     + L + ++F   + + FNV  G           A     
Sbjct: 122 VILAPIF---GVWFGLGIWSKVALGVTLVF---FIVFFNVYQGVKEVSPVVLANARMLGA 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G +  RY+ LP    +  +   T+ G A+  S+V E            G+G  I ++  
Sbjct: 176 NGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEG 229

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                 V  G+L++  F L L+
Sbjct: 230 TFDINTVFAGILVLTAFALILD 251


>gi|15890822|ref|NP_356494.1| ABC transporter, membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium tumefaciens str. C58]
 gi|15159110|gb|AAK89279.1| ABC transporter, membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium tumefaciens str. C58]
          Length = 260

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+    ++ ++    L  L+  G  + I  N + G         E+
Sbjct: 103 QMIRNIPHLALIPLVIL---WFGIDEEAKL-FLVALGVFFPIYINTLLGIQGVDPQLVEM 158

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++ ++ +  +R +ILPG  P   TG   A G  W   IV+E  S       ++GLG  
Sbjct: 159 GRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYM 212

Query: 543 IAESTEKGSFPEVVLGVLI---MCCFVLALNRFL------WHPLY 578
             ++ E      VVL +LI   +     +  RFL      WHP +
Sbjct: 213 AMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAF 257


>gi|73669286|ref|YP_305301.1| phosphate ABC transporter permease [Methanosarcina barkeri str.
           Fusaro]
 gi|72396448|gb|AAZ70721.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanosarcina barkeri str. Fusaro]
          Length = 307

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 26/42 (61%)

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           A PN+++E + +  ++ W+  R+ +LP   P  +TG+I + G
Sbjct: 182 AVPNEYRESSLALGVSKWQTIRHAVLPAAIPGIITGSILSIG 223


>gi|23500215|ref|NP_699655.1| taurine ABC transporter permease [Brucella suis 1330]
 gi|62317665|ref|YP_223518.1| taurine ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|83269648|ref|YP_418939.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|148558660|ref|YP_001257443.1| putative taurine ABC transporter permease [Brucella ovis ATCC
           25840]
 gi|189022914|ref|YP_001932655.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|254691161|ref|ZP_05154415.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 6 str. 870]
 gi|254698945|ref|ZP_05160773.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702857|ref|ZP_05164685.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|254706021|ref|ZP_05167849.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254711679|ref|ZP_05173490.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254712291|ref|ZP_05174102.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254715362|ref|ZP_05177173.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|254732391|ref|ZP_05190969.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|256029687|ref|ZP_05443301.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256157840|ref|ZP_05455758.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|256253198|ref|ZP_05458734.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
 gi|256256347|ref|ZP_05461883.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 9 str. C68]
 gi|260167223|ref|ZP_05754034.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. F5/99]
 gi|260544898|ref|ZP_05820719.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|261756627|ref|ZP_06000336.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|23463818|gb|AAN33660.1| taurine ABC transporter, permease protein, putative [Brucella suis
           1330]
 gi|62197858|gb|AAX76157.1| hypothetical taurine ABC transporter, permease protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939922|emb|CAJ12935.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|148369945|gb|ABQ62817.1| putative taurine ABC transporter, permease protein [Brucella ovis
           ATCC 25840]
 gi|189021488|gb|ACD74209.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|260098169|gb|EEW82043.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|261736611|gb|EEY24607.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
          Length = 272

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255


>gi|311899644|dbj|BAJ32052.1| putative aliphatic sulfonate ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 282

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 24/178 (13%)

Query: 95  RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+   + +++++P L  +   +V+F      K+      A+  + TS  + M  S
Sbjct: 110 RLGEELLDSAVQVLRTVPFLALVPLFMVWFGITETAKI------ALIGVATS--FPMYVS 161

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               + N  R L E  RSF LS W     + +P ++P L+  + +SM+     ++A+E I
Sbjct: 162 ASGGVRNTDRKLVEAMRSFGLSRWAIVREVVLPGALPALLSGLRLSMTLSVIALIAAEEI 221

Query: 214 VVGDTVIPLPGIGSYIALA--IKEQDLLAI---LYAMLTML--GVIFLYDQLLF--RP 262
              +      GIG  +A A      D+LA+   +Y +L +   G + + +++L   RP
Sbjct: 222 NSTE------GIGYLMAQAQNFSRTDVLAVCILIYGLLGLAADGAVRVLERVLMPWRP 273


>gi|254556288|ref|YP_003062705.1| sugar ABC transporter, permease protein (putative) [Lactobacillus
           plantarum JDM1]
 gi|254045215|gb|ACT62008.1| sugar ABC transporter, permease protein (putative) [Lactobacillus
           plantarum JDM1]
          Length = 276

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           + FV+     +     +VL  ++   ++  I  F T   ++ +N Y   VI   L + F 
Sbjct: 95  YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF          + Q+   IPRDL+E +    LS WQ +  + +P+S   L+     S  
Sbjct: 154 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 204

Query: 202 GGW 204
           G W
Sbjct: 205 GSW 207


>gi|240948324|ref|ZP_04752710.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus minor NM305]
 gi|240297363|gb|EER47904.1| spermidine/putrescine ABC transporter membrane protein
           [Actinobacillus minor NM305]
          Length = 286

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 144 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFIRVTIPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224
           +MPG+V   ++ +  + G F+V  ++++  G T  PL G
Sbjct: 204 TMPGIVSGCLLVLLPAMGMFYV--ADLLGGGKT--PLVG 238


>gi|192362263|ref|YP_001982784.1| AtsB [Cellvibrio japonicus Ueda107]
 gi|190688428|gb|ACE86106.1| AtsB [Cellvibrio japonicus Ueda107]
          Length = 284

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 38/227 (16%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            + W S   +      QD L       I++FR+     I ++  + VG+ +   P + + 
Sbjct: 66  ALVWASFVELAESGELQDNL------SISLFRLFSGFGIGAVAGVIVGVLLAISPQVRAY 119

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL-------FNVIA 470
           +    +LL   P  V  P+++               LL+  G  + I+       F V  
Sbjct: 120 LGLTFELLRHIPTLVMVPMLI---------------LLLGIGETFKIVILVKAVFFPVAQ 164

Query: 471 GASA----FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            A+      P  F EV   + +     +R I+LP   P  +TG   A G AW   +  E+
Sbjct: 165 AATDAVRNIPRGFIEVGRVYQLKPLALYRDILLPATVPPVLTGMRIALGRAWLILVAVEL 224

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +        TG+G  +  + +      V++GV++       L++ L
Sbjct: 225 LA------ADTGIGQMMEFARQMLRLDIVLVGVVLTGLIGFGLDKSL 265


>gi|6019466|gb|AAD31786.2|AF126201_4 AtsB [Pseudomonas putida]
          Length = 535

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 16/207 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           T P +++  +   L   SLP+    +  R L+ +V+      +   L   S     V  P
Sbjct: 319 TSPLEVLRTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFGP 378

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  ++ + +  ++     +F      K +   LAA F +          +  + + ++ 
Sbjct: 379 SLSALRQVALFAWVPLLTAWFGLGEGAKTVFVALAAFFPLL--------IATQRGIASLS 430

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E +R+ RL+ WQ+   L +P + P +   + +S+   W   + +E          +
Sbjct: 431 PQLGEAARTLRLNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYF--------M 482

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTML 249
           P  G   +L I  Q L  +   M  ML
Sbjct: 483 PSGGGIASLMIGAQQLFRMDQVMAAML 509


>gi|330447870|ref|ZP_08311518.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492061|dbj|GAA06015.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 297

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 21/196 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            T+R +S +++S L             A+S R+  ++ P+LD+MQ++P   +L   V   
Sbjct: 102 NTMRTMSIILVSTLVAIGIGIPIGIAMARSDRVQRIVTPLLDVMQTMPAFVYLIPVV--- 158

Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           M L  GK+ G     I+A+    ++ N+   +      +  ++ E + ++  S  Q+ + 
Sbjct: 159 MLLGIGKIPGLIAVVIYAVPPVIRLTNLGIRL------VDEEVLEAATAYGASPMQRLFG 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q     L
Sbjct: 213 VQIPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLGL 265

Query: 243 YAMLTMLGVIFLYDQL 258
              L ++ +  ++D++
Sbjct: 266 LNGLAIVALAIIFDRI 281


>gi|300855715|ref|YP_003780699.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
           13528]
 gi|300435830|gb|ADK15597.1| putative ABC transporter, permease component [Clostridium
           ljungdahlii DSM 13528]
          Length = 247

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L  +  ++IS++   V A     S R+   L PI+ + Q++PI       +++F    
Sbjct: 56  TLLITIEGLLISIVLGVVLAVAMNISERIQRALYPIVIVTQTVPITALAPIFILWFGYGI 115

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+   L   F I        T ++Y  L +  +D+EE+  ++  S    F  L  P 
Sbjct: 116 WSKVLVTVLITFFPI--------TINVYDGLRSTRKDMEEILITYGASKKDIFMKLKFPA 167

Query: 188 SMP 190
           S+P
Sbjct: 168 SLP 170


>gi|325525062|gb|EGD02963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 324

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y   P +    +
Sbjct: 141 ISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---AI 196

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ GT +  +  +            E A +      +   ++++PG+ P          G
Sbjct: 197 IVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLG 256

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   IV+E+         ++G+  YI++      F  V   +L++    L  +
Sbjct: 257 WAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305


>gi|323525534|ref|YP_004227687.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323382536|gb|ADX54627.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 276

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 16/68 (23%), Positives = 34/68 (50%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T S  Q     P  L+E +R F  + WQ+  ++ +P ++P L   + ++ +  W  +V 
Sbjct: 157 VTLSTLQGFRGAPVTLDEAARVFGYTRWQRIVHVVLPSAVPTLATGVRLAFTKAWLALVV 216

Query: 210 SEMIVVGD 217
            E++   +
Sbjct: 217 VELVASSE 224


>gi|227871986|ref|ZP_03990372.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
 gi|227842162|gb|EEJ52406.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
          Length = 344

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 10/172 (5%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ +  GI  G+   I+  I+PF +LL + P+  + P+V+   +         ++L    
Sbjct: 163 IVGLFTGIACGYNKKINYWIEPFMKLLGSIPSTTWIPIVMVLATSLFRGSVFIIAL---- 218

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           G  + I    I G       + E A +           I +P   P    G + A   A 
Sbjct: 219 GVWFSITLATITGIRNMDKSYYEAARTLGAKEKDLILEIAIPSALPSIFQGMVQAMSSAC 278

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A +V+E+          +GLG YI        + ++   ++++C   + +N
Sbjct: 279 MALMVAEMIG------VESGLGWYITWQKSWAEYGKMYGAIILICGIFVTVN 324


>gi|160901253|ref|YP_001566835.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160366837|gb|ABX38450.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 241

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   W IL +  AG +    ++  +A S   T       ++LPGI    +TG   A 
Sbjct: 120 LLAFAAVWPILLSTAAGVAQLDRNWLLLARSLSATRTETVLRVVLPGITAQILTGVRLAI 179

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           G  W   + +E+         + GLG +I ++ ++ ++ E++  V+++     AL+ 
Sbjct: 180 GIIWIVLVPAEMLG------VSAGLGYFILDTRDRLAYSELMAAVVLIGALGYALDH 230


>gi|144900961|emb|CAM77825.1| ABC transporter, permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 273

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI  G  P++ + + PF  +L+  P     P++        L+      +L++ G   +
Sbjct: 98  LGIGTGLIPYVRAGLSPFIAVLSLIPPMAILPILFIVFGLDELSK----VVLIVIGIAPF 153

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           ++ ++     A P++    A +   + W+    ++LP ++P  +     + G AW
Sbjct: 154 LIRDLALRVEAIPSELVIKAQTLGASTWQIITRLVLPNVWPKLLDAVRLSLGPAW 208


>gi|310657351|ref|YP_003935072.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium sticklandii DSM 519]
 gi|308824129|emb|CBH20167.1| Binding-protein-dependent transport systems inner membrane
           component [Clostridium sticklandii]
          Length = 206

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 12/191 (6%)

Query: 384 CITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
            I+ F +V+L +I SI+  + +GI I     ++  I   A +L   P+   F +++  + 
Sbjct: 18  TISHFSIVILAMIISIVLGVIIGILITNNKQLAKLILNIANILMTIPSLALFSVLIPIMG 77

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                    L L     TQ  I+ NV  G         E A    ++  +    I +P  
Sbjct: 78  IGKAPAIAGLVLY----TQLPIIRNVYTGIITIDPSIIEAAKGMGLSNSKIMLKIKIPLA 133

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  + G  TA         +  +A++    +   GLG YI +   +G+   +++G +++
Sbjct: 134 FPVIMAGLRTATVMGIG---IGAIAAY----IGAGGLGEYIFQGINRGNDRMIIIGAIMV 186

Query: 563 CCFVLALNRFL 573
               + +++ L
Sbjct: 187 SLITILVDKSL 197


>gi|291455459|ref|ZP_06594849.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291358408|gb|EFE85310.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 278

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++  G  + +  NV AG         E   S  ++ W   R+++LPG  P  +TG   + 
Sbjct: 149 IITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 208

Query: 515 GGAWNASIVSE 525
           G AW A + +E
Sbjct: 209 GIAWLALVFAE 219


>gi|258646314|ref|ZP_05733783.1| spermidine/putrescine transport system permease protein PotC
           [Dialister invisus DSM 15470]
 gi|260403705|gb|EEW97252.1| spermidine/putrescine transport system permease protein PotC
           [Dialister invisus DSM 15470]
          Length = 272

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +++  V A       +++E A   +   W+ +RYI LP I P    GA+ A   + +  I
Sbjct: 145 FVVITVGARLDGLKQEYEEAAGDLYARPWQCFRYITLPLIMPGITAGALIAFTLSIDDFI 204

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +S  A+  +    +T L  YI    ++G  PE+
Sbjct: 205 ISFFAAGPN----STTLPLYIYAMVKRGISPEI 233


>gi|170693280|ref|ZP_02884440.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141810|gb|EDT09978.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 263

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131
           L    +S+L     A L A S  +   L P++   QSIP +      VV+F   L+P ++
Sbjct: 69  LGGFALSVLIGVPIAMLVAASPLIESYLYPLVVFSQSIPKVAIAPLFVVWFGFGLFP-RI 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           + A L   F +  S V  M F       ++ +DL ++++S   S  + F+ + +P ++P 
Sbjct: 128 LVAFLLGFFPVVVSTV--MGFK------SVEKDLTDLAKSMGSSPVKTFFKISLPHALPS 179

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTML 249
           +  +M +S++      +A    VVG+ V    G+G  +  A    D   I  A+  L+++
Sbjct: 180 IFASMKVSIT------LAVVGAVVGEFVGANSGLGFVLQRANGNFDQPLIFSALVVLSVI 233

Query: 250 G-VIFLYDQLLFRPMIVWSNKFR 271
           G ++F+   +L R  I W    R
Sbjct: 234 GALLFVAIDMLERIAIPWHASHR 256


>gi|168186541|ref|ZP_02621176.1| putative taurine ABC transporter, permease protein [Clostridium
           botulinum C str. Eklund]
 gi|169295451|gb|EDS77584.1| putative taurine ABC transporter, permease protein [Clostridium
           botulinum C str. Eklund]
          Length = 253

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 33/161 (20%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++ ++ + ++ + +G++ G   ++   + PF   + A P  V   ++++ V +   N 
Sbjct: 64  RVLIGLLFSIVLGVILGLFSGMNVYLEEILMPFISSIKATP--VMSIIILALVWFKASNV 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +++ ++L+ F     I  N + G  +   +  ++A+ +++      + I +P I  Y V+
Sbjct: 122 SIFTTILICFPI---IYTNAVEGIKSTDLNLLQMANVYNVKKIYIVKDIYIPTIKSYVVS 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G +   G A+  S+ SEV S     +    L +     TE+
Sbjct: 179 GILMCLGLAFKVSVASEVLSTPKYSIGVNILNSKAMLETEE 219


>gi|121535484|ref|ZP_01667293.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121305903|gb|EAX46836.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 268

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 26/168 (15%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV    ++A+II +P+GI +G      + ++P    L   PA+ F PL +          
Sbjct: 77  RVTGGFLLAAIIGVPLGILMGSLKVFEAFVEPLLGFLRYMPASAFIPLFI---------- 126

Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILP 500
            LWL +       ++ FGT + +   V+           + A +  ++    +WR +ILP
Sbjct: 127 -LWLGIGESEKVAVIFFGTFFQLTLMVMDVTKNVSQALIDTAYTLGVSKRGVFWR-VILP 184

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              P  V       G AW   +V+E+ +       ++GLG  I +S  
Sbjct: 185 ASMPGIVDTLRITFGWAWTYLVVAEIVA------ASSGLGHMIMQSQR 226


>gi|71278998|ref|YP_271573.1| amino acid ABC transporter permease [Colwellia psychrerythraea 34H]
 gi|71144738|gb|AAZ25211.1| amino acid ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 346

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 34/186 (18%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            YA +T   +     IS+L         +K  R    ++PILD++Q++P           
Sbjct: 150 SYAVQTMAIIFVCTGISVLLGVPIGIAMSKYDRFQKGVIPILDMLQTLP----------S 199

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ----------SLCNIPRDLEEVSRSF 172
           F+ L P       L  +F++  S+++ +   MY            +  + +D+ E + +F
Sbjct: 200 FVYLIP-------LIFLFSVTESKLYGIAIIMYAIVPVIRLTDLGIRLVDKDIIEGANAF 252

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            +S  QK + + +P ++P +       M+G    ++ S  +VV  +++  PG+G  +   
Sbjct: 253 GMSARQKLFNVELPLALPNI-------MAGVNQTIMMSLAMVVIASLVSAPGLGVLVLRG 305

Query: 233 IKEQDL 238
           I   +L
Sbjct: 306 INNLEL 311


>gi|257388311|ref|YP_003178084.1| binding-protein-dependent transporters inner membrane component
           [Halomicrobium mukohataei DSM 12286]
 gi|257170618|gb|ACV48377.1| binding-protein-dependent transport systems inner membrane
           component [Halomicrobium mukohataei DSM 12286]
          Length = 329

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLE 166
           P +GFLT  +     L P   +    +A F I  + +W     M   +   L +I R L 
Sbjct: 171 PSIGFLTPPLADLGLLAPTNTLNDPASATFVIIVADIWKTSAFMALLILAGLQSIDRGLY 230

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMP 190
           +V++    S WQ+F ++  P  +P
Sbjct: 231 DVAKVAGASKWQQFKHITFPLILP 254


>gi|24379567|ref|NP_721522.1| putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|290580432|ref|YP_003484824.1| putative phosphate ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377512|gb|AAN58828.1|AE014950_11 putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|254997331|dbj|BAH87932.1| putative phosphate ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 295

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIP-----ILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +Y +  AK  RL   +   ++I+ S+P     + G+L F VV F   Y   +I   LA  
Sbjct: 85  IYLSEYAKKGRLTDFVRTCIEILSSLPSVVVGLFGYLIF-VVQFQ--YGFSIISGALA-- 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  MT ++  SL N+     E   +  +S W+   ++ +P ++PG+V  ++  
Sbjct: 140 LTVF--NLPQMTRNIEDSLRNVHHTQREAGLALGISRWETVLHVVIPEALPGIVTGIV-- 195

Query: 200 MSGGWFFVVASEMIVVGDTVIP 221
           ++ G  F  A+ +I       P
Sbjct: 196 LASGRIFGEAAALIYTAGQSAP 217


>gi|315039177|ref|YP_004032745.1| maltose ABC transporter permease protein [Lactobacillus amylovorus
           GRL 1112]
 gi|325957649|ref|YP_004293061.1| maltose ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|312277310|gb|ADQ59950.1| maltose ABC transporter permease protein [Lactobacillus amylovorus
           GRL 1112]
 gi|325334214|gb|ADZ08122.1| maltose ABC transporter permease protein [Lactobacillus acidophilus
           30SC]
 gi|327184293|gb|AEA32740.1| maltose ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 285

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 17/158 (10%)

Query: 56  LDVHSLPQYA-----SRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQS 109
           + + + PQY        T +  L++M++S   T   A + ++ R R     + I  ++  
Sbjct: 60  IGIFTNPQYPFGNWIINTLIVSLASMIVSTFLTISVAYVLSRLRFRFRKPFLQIALVLGM 119

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLE 166
            P  GF++   +Y++      + G  +  +F +F   V       Y +      IPR ++
Sbjct: 120 FP--GFMSMIALYYI------LKGLNMLNLFGLFLVYVGGAGLGFYVAKGFFDTIPRSID 171

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           E +     + WQ F ++G+P S P +V+  + +    W
Sbjct: 172 EAAEIDGATKWQVFIHIGLPLSKPMIVYTALTAFIAPW 209


>gi|295095970|emb|CBK85060.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 215

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      ++  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|254699720|ref|ZP_05161548.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|261750186|ref|ZP_05993895.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261739939|gb|EEY27865.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
          Length = 272

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           LVP++  +  IP +  L   V++F    M+ Y        +   F  FT  V     + Y
Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+  
Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252
           G       G+GSYI  A    DL  +    A+L+++G+I
Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255


>gi|162453315|ref|YP_001615682.1| trehalose/maltose transport system, permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161163897|emb|CAN95202.1| Trehalose/maltose transport system, permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 292

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 12/116 (10%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L + +V  + I   I +LG L F ++ F+NLY       +L A+  I T  ++ + 
Sbjct: 113 RGRSLVLYVVLGMTIFPQIAVLGAL-FQMINFLNLY------NQLPAL--ILTYLIFTLP 163

Query: 152 FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           F+++     +  IPR++EE +     + WQ F  + +P S+PG+    +++    W
Sbjct: 164 FTVWVLTGFMKAIPREIEEAAYVDGATHWQVFTQIMLPLSVPGMATTGILAFIAAW 219


>gi|157145837|ref|YP_001453156.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895]
 gi|157083042|gb|ABV12720.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895]
          Length = 215

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+ IGA L AI A+F   +  +  + + +L ++P  L E  R   ++ WQ+  ++ +P +
Sbjct: 80  GQGIGA-LPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMA 138

Query: 189 MP 190
           +P
Sbjct: 139 LP 140


>gi|281357438|ref|ZP_06243926.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281316041|gb|EFB00067.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 280

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           TF M Q + NIP+ L+E +     + WQ +W + +P + P LV
Sbjct: 158 TFLMRQFMMNIPKSLDEAAEIDGATKWQLYWDVVLPLARPALV 200


>gi|146338492|ref|YP_001203540.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191298|emb|CAL75303.1| putative ABC transporter; permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 288

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I  N  +G  A  N  + V  ++ + G +  R+I++P  FP  +TG       AW   
Sbjct: 163 WAIALNTHSGFRAVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWAFAWRTL 222

Query: 522 IVSEV 526
           I +E+
Sbjct: 223 IAAEL 227


>gi|303235143|ref|ZP_07321763.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
 gi|302493735|gb|EFL53521.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
          Length = 207

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 4/134 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM RVV   +IA ++ +P+G+ +G        +      L   P   + PL +  +   
Sbjct: 74  ITMSRVVKGWLIAVLVGVPIGMAMGLSKIFEGILGGVVNSLRQIPMMAWVPLSIIWLGIG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P L++   +     + ++ N   G ++   D+   A S   +    +  +++P   P
Sbjct: 134 D-GPTLFM---IALNGVFQVIMNTSTGVASIDKDYYNAAKSMGASKASTFVNVVVPASMP 189

Query: 505 YYVTGAITACGGAW 518
           + + GA  A G  W
Sbjct: 190 HILVGARLAIGAGW 203


>gi|301170097|emb|CBW29701.1| polyamine transporter subunit [Haemophilus influenzae 10810]
          Length = 286

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDHRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|294677765|ref|YP_003578380.1| taurine ABC transporter permease TauC [Rhodobacter capsulatus SB
           1003]
 gi|294476585|gb|ADE85973.1| taurine ABC transporter, permease protein TauC [Rhodobacter
           capsulatus SB 1003]
          Length = 417

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI++ M+ +P L  +   ++++     GK++         +F + +W M  +    +  +
Sbjct: 258 PIVEFMRPVPPLALIPLIIIWWGIWETGKIV--------LLFLAALWIMVIAARSGVAGV 309

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                  + S   S WQ   ++ +P S+P L     ++M   W  VVA+E++  
Sbjct: 310 RLSKVHAAYSLGASKWQVLTHVIIPNSLPDLFIGARVAMGVCWGTVVAAELVAA 363


>gi|238059728|ref|ZP_04604437.1| ABC transporter [Micromonospora sp. ATCC 39149]
 gi|237881539|gb|EEP70367.1| ABC transporter [Micromonospora sp. ATCC 39149]
          Length = 459

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/74 (24%), Positives = 38/74 (51%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I +  VW +  +  + +      + E + SFR+S W++ W+L +P + P ++  +  
Sbjct: 325 VVVIVSGAVWPILLNTIEGVRATDSVMTETAHSFRVSWWERLWFLVLPAASPRIMAGVRQ 384

Query: 199 SMSGGWFFVVASEM 212
           ++S     +V SEM
Sbjct: 385 ALSVALILMVISEM 398


>gi|163856869|ref|YP_001631167.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella petrii DSM 12804]
 gi|163260597|emb|CAP42899.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 257

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547
           T W   + + LP + P  +TGA  A G AW A I +E +  +G       GLG  +A S 
Sbjct: 164 TPWGLIKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E      V+  +L++      +++F+   L
Sbjct: 218 EIADMTGVMANILVIAILAALIDQFVLENL 247


>gi|158425998|ref|YP_001527290.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158332887|dbj|BAF90372.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 270

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +RV     IA+++ + +G+ IG+   I   I+P  Q+L   P   + PL +       
Sbjct: 72  STWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSWIPLAIIWFGIAD 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P ++L  L   G  + IL N I G      +     +       +  R+I+LP   P 
Sbjct: 132 -KPAIFLVFL---GAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQLLRFIVLPAAMPS 187

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
              G     G AW  ++ +E+ +
Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210


>gi|148825886|ref|YP_001290639.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae PittEE]
 gi|229846802|ref|ZP_04466909.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 7P49H1]
 gi|148716046|gb|ABQ98256.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae PittEE]
 gi|229810291|gb|EEP46010.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 7P49H1]
 gi|309973028|gb|ADO96229.1| Spermidine/putrescine ABC transporter, permease protein
           [Haemophilus influenzae R2846]
          Length = 286

 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDHRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|325685676|gb|EGD27756.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 220

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ R L   ++ I +++Q+IP L  L+  ++       G  +G     I  +F   +  +
Sbjct: 51  ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             + Y  + N+ ++L + ++   ++ WQ  + + +P SM
Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141


>gi|227524881|ref|ZP_03954930.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227087952|gb|EEI23264.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 508

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 17/183 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+++     A  A   R    + +    IMQ+IP L  L         L P   I
Sbjct: 28  LISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G++  AI A+    +  +  + Y +L  I  +L E +  F L+ WQ+ + + +P S   +
Sbjct: 81  GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--TMLG 250
           +  +  S       ++ +  +     +I   G+G++I L I   +    L   +   +L 
Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSNTALTLTGAIGSALLA 192

Query: 251 VIF 253
           V+F
Sbjct: 193 VVF 195


>gi|302037731|ref|YP_003798053.1| phosphate ABC transporter auxiliary and permease protein
           [Candidatus Nitrospira defluvii]
 gi|300605795|emb|CBK42128.1| Phosphate ABC transporter, auxiliary and permease protein (modular
           protein) [Candidatus Nitrospira defluvii]
          Length = 549

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%)

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           LW SL +   T   ++     G SA P DF+E +     T +   R++I+P   P  +TG
Sbjct: 390 LWASLTLALLTVPVVIVATEEGLSAVPRDFREGSLGLGATKFETLRHVIIPCALPGILTG 449

Query: 510 AITACGGA 517
            I A   A
Sbjct: 450 LILAMARA 457


>gi|291561237|emb|CBL40036.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 257

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +   ++P  QL+   P   F  ++++ +     N ++++S L+++     I  N  AG
Sbjct: 87  PIVDEFLEPPVQLMKTVPVASF--VILALIWTGSKNLSVFISFLVVYPM---IHVNTKAG 141

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +   +  E+A  FH+   R   YI    ++PY  +   TA G  + + I +EV     
Sbjct: 142 LISADRELLEMAEVFHVPFIRRAFYIYRTALYPYLKSACRTALGMGFKSGIAAEVIG--- 198

Query: 532 IHLRTTGLGAYIAE 545
           +   + G G Y+A+
Sbjct: 199 VPDGSIGEGLYLAK 212


>gi|271963355|ref|YP_003337551.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506530|gb|ACZ84808.1| ABC-type transporter, permease protein [Streptosporangium roseum
           DSM 43021]
          Length = 262

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 27/191 (14%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +P G  +G  P   + ++P  + L   P+    PL ++  S      ++ ++L+ ++
Sbjct: 78  MIAVPAGFVLGTLPRAETALRPVLEFLRPIPSLALIPLALALFSDRF---DMKITLI-VY 133

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTGAITACGGA 517
              W +L N + G        KE   SF        WR + LP   P+  TG   A   A
Sbjct: 134 AATWPVLMNTLYGLKDVDPLAKETLRSFGFGPLSVLWR-VSLPSTAPFVATGVRLASAIA 192

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV------------VLGVLIMCCF 565
              +I  E+ + G     + G+G ++    E G  P+             V+G++    F
Sbjct: 193 LIVAISVELLAGG-----SDGIGVFL---IEVGGSPDAMVYIIATAIWAGVIGLVTDSLF 244

Query: 566 VLALNR-FLWH 575
           VLA  R F WH
Sbjct: 245 VLAERRIFRWH 255


>gi|227511900|ref|ZP_03941949.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227084876|gb|EEI20188.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 512

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 21/180 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+++     A  A   R    + +    IMQ+IP L  L         L P   I
Sbjct: 28  LISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G++  AI A+    +  +  + Y +L  I  +L E +  F L+ WQ+ + + +P S   +
Sbjct: 81  GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +     +I   G+G++I L I   +        LT+ G I
Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSN------TALTLTGAI 186


>gi|254511123|ref|ZP_05123190.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534834|gb|EEE37822.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 687

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+ D++Q+IP+  FL   ++ F        IG E +A  AI    +  M       L N 
Sbjct: 532 PVCDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGLVNT 583

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P ++ E + S   + WQ    +  P++ P ++  +  ++      + A  M+V+   +I 
Sbjct: 584 PEEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 636

Query: 222 LPGIGSYIALAIKEQDL 238
             G+G  I LA+ + D+
Sbjct: 637 TTGLGQSIYLALGQADV 653


>gi|303327854|ref|ZP_07358294.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp.
           3_1_syn3]
 gi|302862215|gb|EFL85149.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp.
           3_1_syn3]
          Length = 296

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 21/195 (10%)

Query: 81  LFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAE 135
           + T VY T  A    RR   ++ P ++++ ++P  +LGFL   V+   +  + G   G  
Sbjct: 89  VLTAVYLTEIAHPGVRR---IIKPFVELLAALPSVVLGFLGMVVLAPVIQDWLGAATGLN 145

Query: 136 L-AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           L  A   +    V  +      +L ++PRDL E S +   + WQ    + +P ++ G+  
Sbjct: 146 LLNASLVLALMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVAIPAALSGIGT 205

Query: 195 NMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            +M+ MS      +   M+  G         D V P+P   + IA  + E    +  Y  
Sbjct: 206 AVMLGMSRAIGETMVVLMVAGGAGLIPTSLLDPVRPMP---ASIAAEMAEAPFRSDHYHA 262

Query: 246 LTMLGVIFLYDQLLF 260
           L  +G++  +  L F
Sbjct: 263 LFAIGIVLFFLTLAF 277


>gi|291087046|ref|ZP_06345233.2| putative ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291076292|gb|EFE13656.1| putative ABC transporter, permease protein [Clostridium sp. M62/1]
          Length = 270

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           F P +   + P   L+ + P   F  ++++ +     N ++++S +++F   +    + +
Sbjct: 104 FLPVLKEFLAPAVLLMKSIPVASF--VILALIWIGSENLSVFISFMVVFPMIYESTLSGL 161

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +GA A      E+A  F I+G R +R I LP + PY       A G    + + +EV
Sbjct: 162 SGADA---QLLEMACVFRISGLRKFRAIYLPALLPYLAGSCRFALGMGIKSGVAAEV 215


>gi|184200966|ref|YP_001855173.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
 gi|183581196|dbj|BAG29667.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
          Length = 293

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 17/197 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD +  +W       R++  +++A+ I +P+G+ IG    +     P  Q L       +
Sbjct: 100 QDAVTSLW-------RLLGGLLLATAIGVPLGLVIGSWQRVRWASAPVVQFLRMVSPLSW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ V+            +  L+     W I  N  AG +A       VA +   T +  
Sbjct: 153 APVAVALFGVGSAP----VVFLVAAAAVWPITLNTAAGVAALDPAHLRVARTLGATPFER 208

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++ P I PY +TG   A G +W   + +E+         +TGLG  I  + ++ ++ 
Sbjct: 209 LLTVVFPSIRPYVMTGVRLALGISWVVLVPAEMLG------VSTGLGYEILNARDRLAYD 262

Query: 554 EVVLGVLIMCCFVLALN 570
           E+++ +L++    +AL+
Sbjct: 263 EMLVVILVIGLLGIALD 279


>gi|320007752|gb|ADW02602.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 292

 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 10/169 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G  W S+    + +    +L VIW    ++ R +   ++A  I  P+G+ +     + + 
Sbjct: 71  GAVWDSL---TDMWVQGTLLEVIW---TSVSRGLFGFVMAVAIGTPLGLLVARVKVVRAA 124

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    L + P+  +   V   V +  LN ++  +++++ G    +   +++G    P 
Sbjct: 125 IGPILSGLQSLPSVAW---VAPAVIWLGLNDSMMYAVILL-GAVPSVANGLVSGVDQVPP 180

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            F     +   TG R   +I+LP   P Y+ G       +W + + +E+
Sbjct: 181 LFLRAGRTIGATGLRGTIHIVLPAALPGYLAGLKQGWAFSWRSLMAAEI 229


>gi|253575510|ref|ZP_04852847.1| spermidine/putrescine ABC transporter permease [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251845157|gb|EES73168.1| spermidine/putrescine ABC transporter permease [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 268

 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y+   V    S      +E A     + W+ +RY+ LP I P  ++GA+ A   + +  +
Sbjct: 144 YVYVVVTTRLSGMGGQLEEAAQDLGASSWQTFRYVTLPQIAPGIISGALIAFTLSLDDFM 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           VS   S  +    +T L  YI    ++G  PE+
Sbjct: 204 VSFFVSGPN----STTLPIYIYGQVKRGISPEI 232


>gi|239631246|ref|ZP_04674277.1| maltose ABC transporter permease protein [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301066002|ref|YP_003788025.1| maltose ABC transporter permease [Lactobacillus casei str. Zhang]
 gi|239525711|gb|EEQ64712.1| maltose ABC transporter permease protein [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300438409|gb|ADK18175.1| maltose ABC transporter permease protein [Lactobacillus casei str.
           Zhang]
          Length = 285

 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            IPR ++E +     + WQ F ++G+P S P +V+  +M+  G W   + S +I+
Sbjct: 165 TIPRAIDEAAEIDGATKWQVFTHIGLPMSRPIVVYTALMAFIGPWIDFIFSGIIL 219


>gi|84686260|ref|ZP_01014155.1| Binding-protein-dependent transport systems inner membrane
           component [Maritimibacter alkaliphilus HTCC2654]
 gi|84665787|gb|EAQ12262.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2654]
          Length = 270

 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 34/64 (53%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           MT  + Q + +IP +    +++   S W     + +P  +P L+ N+ +S+   W F++A
Sbjct: 152 MTRDLSQRVLDIPHEQIVKAQTLGASTWVIAARVALPQILPRLIANVRLSLGSAWLFLIA 211

Query: 210 SEMI 213
           +E +
Sbjct: 212 AEAV 215


>gi|217421757|ref|ZP_03453261.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|217395499|gb|EEC35517.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 313

 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252


>gi|191636887|ref|YP_001986053.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|227533459|ref|ZP_03963508.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|239630873|ref|ZP_04673904.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065197|ref|YP_003787220.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Lactobacillus casei str. Zhang]
 gi|190711189|emb|CAQ65195.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|227188909|gb|EEI68976.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|239527156|gb|EEQ66157.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300437604|gb|ADK17370.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei str. Zhang]
 gi|327380918|gb|AEA52394.1| Proline/glycine betaine ABC transporter permease [Lactobacillus
           casei LC2W]
 gi|327384090|gb|AEA55564.1| Proline/glycine betaine ABC transporter permease [Lactobacillus
           casei BD-II]
          Length = 220

 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ R L   ++ I +++Q+IP L  L+  ++       G  +G     I  +F   +  +
Sbjct: 51  ARHRTLSSTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             + Y  + N+ ++L + ++   ++ WQ  + + +P SM 
Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSMS 142


>gi|329123530|ref|ZP_08252093.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, permease protein [Haemophilus aegyptius
           ATCC 11116]
 gi|327470346|gb|EGF15804.1| spermidine/putrescine ABC superfamily ATP binding cassette
           transporter, permease protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 286

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|300769223|ref|ZP_07079111.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300493252|gb|EFK28432.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 280

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           + FV+     +     +VL  ++   ++  I  F T   ++ +N Y   VI   L + F 
Sbjct: 99  YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF          + Q+   IPRDL+E +    LS WQ +  + +P+S   L+     S  
Sbjct: 158 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 208

Query: 202 GGW 204
           G W
Sbjct: 209 GSW 211


>gi|227894585|ref|ZP_04012390.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863576|gb|EEJ70997.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 331

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 93  SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVW 148
           S++    L  + +++  IP  + GFL  T++     NL+ G   G  LAA   +F   + 
Sbjct: 142 SKKGASFLQSVTELLVGIPSVVYGFLGLTIIVPVIRNLFGGTGFGI-LAATLVLFVMVLP 200

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     SL  +P    + S + R + WQ  +++ +  + P ++  ++  M+  +   +
Sbjct: 201 TITSLTVDSLKAVPSHFRKASMALRATHWQTIYHVVLRVATPRILTAVIFGMARAFGEAL 260

Query: 209 ASEMIVVGDTVIP 221
           A +M++    ++P
Sbjct: 261 AVQMVIGNAVLMP 273


>gi|213583938|ref|ZP_03365764.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 210

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+++Q+IP   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 40  VLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGV 99

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +PRD+ E +R+  +S  Q+F ++ +P ++P  + ++ + M       VA+ +I 
Sbjct: 100 VAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIG 159

Query: 215 VG 216
            G
Sbjct: 160 AG 161


>gi|209547288|ref|YP_002279206.1| betaine/proline ABC transporter permease [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209538532|gb|ACI58466.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 283

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 65  ASRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           AS  TL ++S A+VIS+L  F    L ++ + L  V+ PILD+MQ++P
Sbjct: 90  ASMQTLALVSVAVVISVLIAFPIGVLCSRHKTLEAVVRPILDVMQTVP 137


>gi|191637927|ref|YP_001987093.1| Maltose ABC transporter, permease component [Lactobacillus casei
           BL23]
 gi|145309105|gb|ABP57781.1| MalG1 [Lactobacillus casei BL23]
 gi|190712229|emb|CAQ66235.1| Maltose ABC transporter, permease component [Lactobacillus casei
           BL23]
 gi|327381996|gb|AEA53472.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus casei LC2W]
 gi|327385154|gb|AEA56628.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus casei BD-II]
          Length = 285

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            IPR ++E +     + WQ F ++G+P S P +V+  +M+  G W   + S +I+
Sbjct: 165 TIPRAIDEAAEIDGATKWQVFTHIGLPMSRPIVVYTALMAFIGPWIDFIFSGIIL 219


>gi|163844631|ref|YP_001622286.1| hypothetical protein BSUIS_B0468 [Brucella suis ATCC 23445]
 gi|163675354|gb|ABY39464.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 272

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 13/181 (7%)

Query: 393 LIIIASI---IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           LII AS+   + I +G+ IG   ++ + I P    L   P     PL V       ++  
Sbjct: 87  LIIGASLGIAVGISLGVMIGLFSYVRAGIVPLVAALFPIPKIALLPLFVIWFGIDEMSKY 146

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +    L+ FGT    +                +  SF ++ W   R I+LPG FP  ++G
Sbjct: 147 M----LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSG 202

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +     + +I+  VA+   +     G+G+YI E+       ++  GV I+    L +
Sbjct: 203 LRVSI----SIAIILLVAA--EMLGAQYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIV 256

Query: 570 N 570
           N
Sbjct: 257 N 257


>gi|146311575|ref|YP_001176649.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145318451|gb|ABP60598.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 215

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + P+LG  T      ++  F  + P     G+ IGA L AI A+F   +  +  + + +L
Sbjct: 50  ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            ++P  L E  R   ++ WQ+  ++ +P ++P
Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140


>gi|83643070|ref|YP_431505.1| proline/glycine betaine ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83631113|gb|ABC27080.1| ABC-type proline/glycine betaine transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 373

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 11/114 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPIL---GFLTFTVVYFMNLYP-GKVIGAE----L 136
           ++AT + K+RR    L  +L ++Q+IP L   G L   + Y  N +   + IG +     
Sbjct: 190 IWATRSEKARR---GLFGVLSVLQTIPSLALFGLLIAPLSYLANEFEWLRAIGVQGIGFT 246

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            A+ A+    +  MT + Y +L   P  + E +R   +S  Q F  + +P + P
Sbjct: 247 PALIALIGYSLLPMTRNAYVALTGTPEPVLEAARGMGMSESQVFLQVRLPLAAP 300


>gi|308174288|ref|YP_003920993.1| phosphate ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607152|emb|CBI43523.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
 gi|328554234|gb|AEB24726.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           TA208]
 gi|328912631|gb|AEB64227.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           LL3]
          Length = 309

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 99  VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154
           VL P+++++  IP  + GF+  TV V F+  +     G  L A   + +  +   +T   
Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIGSFKSSGTGHSLLAGTIVLSVMILPTITSIS 184

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L ++P+ L + S +   + WQ    + +P + P L+  +++ M+  +   +A +M++
Sbjct: 185 ADALASLPKHLRDGSYALGATRWQTIRKVLIPAAFPTLLTAVVLGMARAFGEALAVQMVI 244

Query: 215 VGDTVIP 221
               ++P
Sbjct: 245 GNTKLLP 251


>gi|296454549|ref|YP_003661692.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183980|gb|ADH00862.1| ABC-type sugar transport system permease component [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 301

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R+  MV V  + +     I  F+ +  +  +N Y G +    LA I  +    +WNM 
Sbjct: 128 RGRKPIMVFVLAIQMTSGGIIPQFIIYNQLGLLNKYSGLI----LAYIAMVLPFAIWNM- 182

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                   NIP+D+ E +     + WQ  W +  P + PG+V   + +    W
Sbjct: 183 ---RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPGIVSTSVFAFINAW 232


>gi|300088671|ref|YP_003759193.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299528404|gb|ADJ26872.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 267

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 11/180 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G   G+   +   + P  Q L A PA  + P ++  +      P + +  + IF T + 
Sbjct: 91  LGGLTGYTRWVEKILDPTVQGLRAVPAVAWIPFLILTLGIAD-APKIAMIAIAIFFTAYV 149

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
              N  AG  +      E+A ++ ++     R II+P   P    G   A G AW  ++ 
Sbjct: 150 ---NTFAGVRSTDQKLIELARAYRLSRAVVIRRIIIPSAKPQIFVGLRLAAGIAWIVAVF 206

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           SE      I +  +GLG  + +    G  P+  + ++++      L   L     L  TR
Sbjct: 207 SE------ILIGNSGLGVLLNDGRTLGR-PDQTIALMLVLATAGKLTDGLIRLAELRATR 259


>gi|294628454|ref|ZP_06707014.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. e14]
 gi|292831787|gb|EFF90136.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. e14]
          Length = 871

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 34/52 (65%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +L A +I+L+ +      AA+S R+G V+ P+LD MQ++P + +L   +++F
Sbjct: 94  VLVATLIALVVSVPVGIWAARSDRVGAVVRPVLDFMQTLPAMIYLIPAILFF 145


>gi|159043922|ref|YP_001532716.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911682|gb|ABV93115.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 303

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 17/183 (9%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP----QYASR 67
           +R + P IF +   +LV+  + + L+ +    +P   V  V I    +SLP     +   
Sbjct: 53  ARTLVPVIFGVT--ILVLWEVTVRLYAVPGVILPPPSVIGVRIA---NSLPILWEDFVQT 107

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
                LS   +  +  F  A L  +   L   L+P+ + M ++PI+G     V++F   +
Sbjct: 108 FVKGALSGYAMGAVAAFAVAILVDRYDFLRRGLLPVGNFMAALPIIGTAPILVMWFGFDW 167

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F I  + V  +     +S   + RDL E   ++  + WQ   YL +P 
Sbjct: 168 ESKAAVVVVMVFFPILVNTVEGL-----RSADRMQRDLME---TYAATNWQSLLYLRLPA 219

Query: 188 SMP 190
           +MP
Sbjct: 220 AMP 222


>gi|116249415|ref|YP_765256.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254065|emb|CAK12462.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 211

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 26/178 (14%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL- 454
           IA +I + VGIW   RP   + I  F  +L A P+   F L++  +          L+  
Sbjct: 29  IALVISLIVGIWAARRPRSFAVIIIFTGILFAVPSLALFALLIPIMGIGAAPAITGLAAY 88

Query: 455 -LMIFGTQWYILFNVIAGASAFPNDFKEVASSF-HITGWRWWRYIILPGIFPYYVTG--- 509
            LMI      ++ N+  G  A P D  E A    + T  R W  + LP   PY V G   
Sbjct: 89  SLMI------LIRNIGMGFQAIPRDILEAADGMGYGTARRIWE-VELPLAMPYIVGGIRI 141

Query: 510 -AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             +T  G       ++ VA++    +   GLG  I E  ++  FPE ++   ++  F+
Sbjct: 142 AMVTVIG-------IATVAAY----INAGGLGVIIFEGIDQ-RFPEKIIAGGLLTSFL 187


>gi|86358895|ref|YP_470787.1| nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli
           CFN 42]
 gi|86282997|gb|ABC92060.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 375

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI  L  FV A LA +   L   L+PI +++ ++PI+G     V++F   +  K     +
Sbjct: 189 VIGCLSGFVVAVLADRVSFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWQSKAAVVII 248

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              F +  + V  +  S      ++ RDL    R++  S WQ  + L +P +MP
Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLFKLKLPAAMP 294


>gi|167845820|ref|ZP_02471328.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 239

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 67  RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 118

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 119 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 178


>gi|16273256|ref|NP_439497.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae Rd KW20]
 gi|260580821|ref|ZP_05848647.1| spermidine/putrescine transport system permease potB [Haemophilus
           influenzae RdAW]
 gi|1172563|sp|P45170|POTB_HAEIN RecName: Full=Spermidine/putrescine transport system permease
           protein PotB
 gi|1574805|gb|AAC22990.1| spermidine/putrescine ABC transporter, permease protein (potB)
           [Haemophilus influenzae Rd KW20]
 gi|260092638|gb|EEW76575.1| spermidine/putrescine transport system permease potB [Haemophilus
           influenzae RdAW]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|326797081|ref|YP_004314901.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547845|gb|ADZ93065.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 323

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L ++F +    +W    +    +  I +DL  VS+  RL  +     + +P S+P +   
Sbjct: 187 LTSMFTVTLCCLWPTLINTAVGVAAIEKDLLNVSKVLRLGWFTHVIKIVIPSSIPMMFTG 246

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI- 252
           + +S+   W  ++A+EM+         PG+G ++         + L  + A + ++G+I 
Sbjct: 247 LRLSLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMASVIVIGLIG 300

Query: 253 FLYDQLLF--RPMIVWSN 268
           FL D+ +   + M+ W  
Sbjct: 301 FLLDRTMLSIQKMVSWDK 318


>gi|313835547|gb|EFS73261.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314928578|gb|EFS92409.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314970373|gb|EFT14471.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328908193|gb|EGG27952.1| LOW QUALITY PROTEIN: ABC transporter, permease protein
           [Propionibacterium sp. P08]
          Length = 297

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           F M QS  ++P +LEE  R    + WQ FW + VP   PGL
Sbjct: 176 FLMRQSFMSVPVELEEAVRLDGCNPWQTFWRVMVPVVKPGL 216


>gi|227508983|ref|ZP_03939032.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191565|gb|EEI71632.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 512

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 17/183 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+++     A  A   R    + +    IMQ+IP L  L         L P   I
Sbjct: 28  LISLIIAIVIAIPLAVYARNHRIFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G++  AI A+    +  +  + Y +L  I  +L E +  F L+ WQ+ + + +P S   +
Sbjct: 81  GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSTDSI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--TMLG 250
           +  +  S       ++ +  +     +I   G+G++I L I   +    L   +   +L 
Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSNTALTLTGAIGSALLA 192

Query: 251 VIF 253
           V+F
Sbjct: 193 VVF 195


>gi|213609282|ref|ZP_03369108.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 247

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+++Q+IP   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 77  VLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGV 136

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +PRD+ E +R+  +S  Q+F ++ +P ++P  + ++ + M       VA+ +I 
Sbjct: 137 VAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIG 196

Query: 215 VG 216
            G
Sbjct: 197 AG 198


>gi|54023923|ref|YP_118165.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
 gi|54015431|dbj|BAD56801.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
          Length = 288

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 10/178 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA  I +P+G+ I +   ++  + P  +L     A    P+ V  +     +       L
Sbjct: 105 IALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIGETSK----VAL 160

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +++ + + IL N I G         + A+S  +   R ++ +ILP   P   TG   A  
Sbjct: 161 VVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPAIFTGLRMAAA 220

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +    + +E+           GLG  I  + +    P +  G+L +    L+ N  L
Sbjct: 221 SSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLLGLSFNGLL 272


>gi|121599597|ref|YP_993010.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|126454363|ref|YP_001066146.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242316273|ref|ZP_04815289.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|121228407|gb|ABM50925.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|126228005|gb|ABN91545.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242139512|gb|EES25914.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
          Length = 323

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262


>gi|266621608|ref|ZP_06114543.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288866706|gb|EFC99004.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 258

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 14/115 (12%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMYQSL 158
           PI +IM+ IP + ++  T+++         IG E  A+   FA F   V N T  +  + 
Sbjct: 102 PIFEIMRPIPPIAWIPLTILWVG-------IGLEAKAMIIFFASFVPCVINATAGIKST- 153

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               + L  V++++  S +  F  +G+P S+P     + ++++  W  +VA+E++
Sbjct: 154 ---NQTLINVAKTYGASDFTIFLKIGIPSSLPMTFAGIRIALNSAWSTLVAAELL 205


>gi|219871008|ref|YP_002475383.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           parasuis SH0165]
 gi|219691212|gb|ACL32435.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           parasuis SH0165]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y S+  I   L E ++    + +Q+F  + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVKVIIPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG+V   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNII 241


>gi|254463971|ref|ZP_05077382.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206684879|gb|EDZ45361.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 679

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V+ P+ D++Q+IP+  FL   ++ F        IG E +A  AI    +  M       L
Sbjct: 521 VVRPVCDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAIIAYAIVPMIRYTRHGL 572

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            + P ++ E + +   + WQ    +  P++ P ++  +  ++   +  +V + +I  G T
Sbjct: 573 VSTPEEMIEAATASGATTWQMLKDIRAPYAAPSILLGLNQTILYAFAMLVIAALI--GTT 630

Query: 219 VIPLPGIGSYIALAIKEQDL 238
                G+G  I LA+ + D+
Sbjct: 631 -----GLGQSIYLALGQADV 645


>gi|199599186|ref|ZP_03212589.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus rhamnosus HN001]
 gi|229551031|ref|ZP_04439756.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|258507070|ref|YP_003169821.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|258538258|ref|YP_003172757.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|199589939|gb|EDY98042.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus rhamnosus HN001]
 gi|229315626|gb|EEN81599.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|257146997|emb|CAR85970.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|257149934|emb|CAR88906.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|259648440|dbj|BAI40602.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           component [Lactobacillus rhamnosus GG]
          Length = 220

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ R L   ++ I +++Q+IP L  L+  ++       G  +G     I  +F   +  +
Sbjct: 51  ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             + Y  + N+ ++L + ++   ++ WQ  + + +P SM
Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141


>gi|84489800|ref|YP_448032.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Methanosphaera stadtmanae DSM 3091]
 gi|84373119|gb|ABC57389.1| predicted ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease protein [Methanosphaera stadtmanae DSM 3091]
          Length = 251

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 24/184 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+++V++ +IIA+I+ I +G+  G+  +          +L   P   + P  +       
Sbjct: 65  TLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSVIVSVLRPIPPIAWIPFSI------- 117

Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               LW  +       ++  G  + I    + G         E A +F ++  +    +I
Sbjct: 118 ----LWFGIGSLPAIFIIFMGCVFPIFVYTVDGVHRTKKVLIESALTFGVSNEQMITEVI 173

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY V+G   A G A   +I  E+         ++G+G  I  ST        V+G
Sbjct: 174 LPSTIPYIVSGLKVAIGIALMCTISGEMIG------SSSGIGYMILTSTNLFDTGSTVVG 227

Query: 559 VLIM 562
           +L++
Sbjct: 228 MLLI 231


>gi|68250139|ref|YP_249251.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 86-028NP]
 gi|145629580|ref|ZP_01785378.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 22.1-21]
 gi|145632911|ref|ZP_01788644.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 3655]
 gi|145641350|ref|ZP_01796929.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae R3021]
 gi|229844196|ref|ZP_04464337.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 6P18H1]
 gi|319897001|ref|YP_004135196.1| polyamine transporter subunit [Haemophilus influenzae F3031]
 gi|68058338|gb|AAX88591.1| spermidine/putrescine transport system permease protein
           [Haemophilus influenzae 86-028NP]
 gi|144978423|gb|EDJ88187.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 22.1-21]
 gi|144986567|gb|EDJ93133.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 3655]
 gi|145273893|gb|EDK13760.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 22.4-21]
 gi|229813190|gb|EEP48878.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae 6P18H1]
 gi|317432505|emb|CBY80863.1| polyamine transporter subunit [Haemophilus influenzae F3031]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|319441515|ref|ZP_07990671.1| ABC transporter, permease protein [Corynebacterium variabile DSM
           44702]
          Length = 291

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 19/148 (12%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148
           AAKS  +  ++ P+LD MQ++P L +L   +V F + + PG +     A +       V 
Sbjct: 117 AAKSETVSKIVKPVLDFMQAMPALAYLVPIIVIFGIGVTPGMI-----ATLIFCMPPGVR 171

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG-GWFFV 207
                + Q    + ++  E  R+F  +G    + + +P ++P +       M+G     +
Sbjct: 172 FTELGIRQ----VDKETVEAGRAFGATGTHILFRIQLPLALPTI-------MAGINQIIM 220

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +A  M+V+   +   PG+G+ I  AI  
Sbjct: 221 LALSMVVLAG-MAGAPGLGADITSAISS 247


>gi|317485963|ref|ZP_07944818.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922736|gb|EFV43967.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 289

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 140 FAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           FA+F   ++     M   +Y S+  +   L + +R    SG+Q FW++  P ++PG++  
Sbjct: 152 FAVFMGILYTFLPFMVLPLYASIEKLDSRLLDAARDLGASGFQSFWHVTFPLTLPGIIAG 211

Query: 196 MMM 198
            M+
Sbjct: 212 SML 214


>gi|302556764|ref|ZP_07309106.1| taurine ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
 gi|302474382|gb|EFL37475.1| taurine ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
          Length = 289

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   IF IF +       S +Q + N+ R L   +R         F  + VP S P ++ 
Sbjct: 157 ETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVPASTPFILV 216

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M + +   W  +VA+E+I   +      G+G  +  A    DL  I   ++++  +  L
Sbjct: 217 GMRVGLGSAWATLVAAELIAAQE------GLGYRMQNAQLYYDLPTIFVGLISIGILGLL 270

Query: 255 YDQLLF---RPMIVWSNK 269
            D++L    R +  W  +
Sbjct: 271 MDRILLLAERKLTGWQER 288


>gi|163744369|ref|ZP_02151729.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381187|gb|EDQ05596.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 244

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 24/124 (19%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +G    P+  +  ++P LGF     +  + LY           +  IF + V  +T    
Sbjct: 93  MGQTFPPVAVLALAVPALGFGAGPTLVALFLY----------GLLPIFENAVTGLT---- 138

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
               N+P    E +R   LS WQ+ W + +P ++P  +  + +S+      V+A     +
Sbjct: 139 ----NLPPATMEAARGIGLSRWQRLWRVELPLALPITLTGIRLSV------VIALGTATI 188

Query: 216 GDTV 219
           G TV
Sbjct: 189 GSTV 192


>gi|33151766|ref|NP_873119.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           ducreyi 35000HP]
 gi|33147987|gb|AAP95508.1| spermidine/putrescine transport system permease protein
           [Haemophilus ducreyi 35000HP]
          Length = 288

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++ +ELA I  +    +  M   +Y S+  I   L E ++    +  Q+F  + +P 
Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDNRLLEAAKDLGANALQRFIRITIPL 205

Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224
           +MPG+V   ++ +  + G F+V  ++++  G T  PL G
Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT--PLIG 240


>gi|332982861|ref|YP_004464302.1| CUT1 family carbohydrate ABC transporter membrane protein 1
           [Mahella australiensis 50-1 BON]
 gi|332700539|gb|AEE97480.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
           [Mahella australiensis 50-1 BON]
          Length = 329

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 11/115 (9%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            L  +PR L EV+       W KFW++ VP   P ++  ++M M G      A ++  V 
Sbjct: 212 GLQGVPRSLYEVAEIDGAKAWAKFWHITVPQISPIILLQVIMGMIG------ALQIFTVA 265

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLT-----MLGVIFLYDQLLFRPMIVW 266
             V P    G ++   + E+    +     +     +  +IF+   L+FR    W
Sbjct: 266 MFVRPTSAAGKFMNQLVYERGFTQLHMGEASAIAWILFAIIFVLTLLIFRSTPAW 320


>gi|323968049|gb|EGB63459.1| inner membrane transport system [Escherichia coli M863]
 gi|323977681|gb|EGB72767.1| inner membrane transport system [Escherichia coli TW10509]
 gi|327253257|gb|EGE64911.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli STEC_7v]
          Length = 385

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P     G        A+ A+    +  +   +
Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGVAGTGMTPALIALVLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG Q+F ++ +P ++P
Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310


>gi|298294221|ref|YP_003696160.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296930732|gb|ADH91541.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 305

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ AIF +F +  + +  S    + ++P++   V+R    S  Q FW + +P  +P L 
Sbjct: 167 GDVPAIFLVFITVFFAIVLSTGAQIESVPKNYIHVARIMGASQRQTFWKVILPAILPSLF 226

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++   W  V+ +E + VG       G+G   ++A    +   + + M  +  + F
Sbjct: 227 MTLRLNLFAAWMVVLIAETVGVGT------GLGQITSMARSTFNAKLVFFTMAIIGLLGF 280

Query: 254 LYD 256
           L D
Sbjct: 281 LSD 283


>gi|260582675|ref|ZP_05850463.1| spermidine/putrescine transport system permease potB [Haemophilus
           influenzae NT127]
 gi|260094241|gb|EEW78141.1| spermidine/putrescine transport system permease potB [Haemophilus
           influenzae NT127]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|170692339|ref|ZP_02883502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142769|gb|EDT10934.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 274

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 17/202 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           FT  ++   +W   IT+   V+   + + + + VG+W+   P  S+   P+ +   + P 
Sbjct: 65  FTTGEIYLHLW---ITLLETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAANSMPR 121

Query: 431 NVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            +  P+      ++ L     + L + ++F   + + FNV  G           A     
Sbjct: 122 VILAPIF---GVWFGLGIWSKVALGVTLVF---FIVFFNVYQGVKEVSPVVLANARMLGA 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G +  RY+ LP    +  +   T+ G A+  S+V E            G+G  I ++  
Sbjct: 176 NGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEG 229

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                 V  G+L++  F L L+
Sbjct: 230 TFDINTVFAGILVLTAFALILD 251


>gi|167911037|ref|ZP_02498128.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
          Length = 239

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 67  RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 118

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 119 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 178


>gi|167824274|ref|ZP_02455745.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
          Length = 273

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 101 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 152

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 153 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 212


>gi|116754017|ref|YP_843135.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanosaeta thermophila PT]
 gi|116665468|gb|ABK14495.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Methanosaeta thermophila PT]
          Length = 301

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 30/193 (15%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCV-----------VCGVAIGIAWQSIGYIVNHFTYQDVL 377
           E+ L + +   ++ M+ IF + +           V  + +G  W S G   N F  + ++
Sbjct: 17  ESLLLITAVASIAIMILIFAYLIRESLPAIFEVGVLNLVLGEKWHSSG---NIFGMRPLI 73

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF-F 434
                   T+   ++ + I   + IP+ I++     P   + ++P  +LLA  P+ V+ F
Sbjct: 74  ------VNTLLVAILALAINMSVGIPLAIYLAELSGPRTRAVLKPAVELLAGVPSIVYGF 127

Query: 435 PLVVSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNVIAGAS--AFPNDFKEVASSFH 487
             ++  V Y       L     L+  ++ G  +      I   +  A PN+FKE + +  
Sbjct: 128 LGIIILVPYLGNTFDMLTGRSILAGAILLGVMFIPSITTICEDALRAVPNEFKEGSMALG 187

Query: 488 ITGWRWWRYIILP 500
            T W+  RY++LP
Sbjct: 188 ATRWQTIRYVVLP 200


>gi|284045270|ref|YP_003395610.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949491|gb|ADB52235.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 280

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 28/180 (15%)

Query: 399 IIWIPVGIWIGFRPHI----SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I IPVG+ +G    +       +    Q L   P     PL +           LWL +
Sbjct: 95  LIGIPVGLALGIAAGLFKLGEELVDATMQALRTVPFVSLIPLFI-----------LWLGI 143

Query: 455 -------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ FG  + +  N  AG         E A  F +   +  R +++PG  P  +
Sbjct: 144 GDTSKIALIAFGVTFPVYMNTYAGIRGVDAKLIEAAEVFGLNRRQLVRQVVVPGALPSIL 203

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   A G +  A +VSE  +  +      G+GA ++++ +      V++G+L+     L
Sbjct: 204 VGLRYALGLSVIALVVSETVNANN------GIGALVSDARQFLQTEVVLVGILVYSALGL 257


>gi|225568975|ref|ZP_03778000.1| hypothetical protein CLOHYLEM_05054 [Clostridium hylemonae DSM
           15053]
 gi|225162474|gb|EEG75093.1| hypothetical protein CLOHYLEM_05054 [Clostridium hylemonae DSM
           15053]
          Length = 280

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            L +IP D+ E ++    +GWQ+ W + +P  MP +   M +S++ G
Sbjct: 165 GLQSIPGDVMEAAQIDGATGWQRLWKVTIPMMMPSITICMFLSITNG 211


>gi|297201877|ref|ZP_06919274.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sviceus ATCC 29083]
 gi|197712750|gb|EDY56784.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sviceus ATCC 29083]
          Length = 645

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 23/159 (14%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           A  SRR+  +L P+LD MQ +P   +L   V+ F    P        AA+ A        
Sbjct: 168 AGLSRRMDKILRPVLDTMQVMPAYAYLLPVVLVFGMGVP--------AAVLATVVYAAPP 219

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205
           M       L    +++ E   S   +  Q+     +P +      GL   +MM++S    
Sbjct: 220 MARLTALGLQGADKEVLEAVESLGTTARQRLLTARIPLARKELLLGLNQTIMMALS---M 276

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            V+AS        VI   G+G  +  A+   D+ A L A
Sbjct: 277 AVIAS--------VIGAAGLGDRVYQALASVDVGAALAA 307


>gi|126728823|ref|ZP_01744638.1| glycine betaine/proline ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126710753|gb|EBA09804.1| glycine betaine/proline ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 344

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 75/152 (49%), Gaps = 22/152 (14%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++S RL  +L P+LD++Q++P   +L   +++  ++   K+ G  +     +   ++ N+
Sbjct: 176 SRSDRLQGILTPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAVILYAIVPVVRLTNL 234

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206
              +         D+ E + +F ++  QK + + +P ++P    G+   +MMS++     
Sbjct: 235 GIRLVNP------DVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                M+V+  +++  PG+G  +   I+  +L
Sbjct: 284 -----MVVIA-SMVSAPGLGILVLRGIRNLEL 309


>gi|56696030|ref|YP_166384.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56677767|gb|AAV94433.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 687

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V+ PI D++Q+IP+  FL   ++ F        IG E +A  AI    +  M       L
Sbjct: 529 VVRPICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGL 580

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            + P ++ E + S   + WQ    +  P++ P ++  +  ++      + A  M+V+   
Sbjct: 581 VDTPDEMMEAAISSGATDWQILRDVRAPYAAPTILLGLNQTI------LYAFSMLVIA-A 633

Query: 219 VIPLPGIGSYIALAIKEQDL 238
           +I   G+G  I LA+ + D+
Sbjct: 634 LIGTTGLGQSIYLALGQADV 653


>gi|330810520|ref|YP_004354982.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378628|gb|AEA69978.1| putative Glycine betaine ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 282

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L P+LD+MQ++P   +L  T+  F + + PG +       +FAI  +    +T   Y  +
Sbjct: 127 LRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGI 177

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214
            ++P +L +  ++F  S  Q    + +P +MP    G+   +M+S+S          M+V
Sbjct: 178 RDVPDELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLS----------MVV 227

Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238
           +   ++   G+G  +  A+   D+
Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250


>gi|323972886|gb|EGB68084.1| inner membrane transport system [Escherichia coli TA007]
          Length = 302

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q++P   + G L   +   +  +P  GK  + G  +  A+ A+    +  +   +
Sbjct: 132 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 191

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              L  IPRD+ E +R+  +SG ++F ++ +P ++P
Sbjct: 192 VVGLNQIPRDVLESARAMGMSGARRFLHVQLPLALP 227


>gi|254188718|ref|ZP_04895229.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157936397|gb|EDO92067.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 323

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262


>gi|124385635|ref|YP_001026342.1| permease [Burkholderia mallei NCTC 10229]
 gi|126450587|ref|YP_001080384.1| permease [Burkholderia mallei NCTC 10247]
 gi|254178339|ref|ZP_04884994.1| permease [Burkholderia mallei ATCC 10399]
 gi|254358544|ref|ZP_04974817.1| permease [Burkholderia mallei 2002721280]
 gi|124293655|gb|ABN02924.1| permease [Burkholderia mallei NCTC 10229]
 gi|126243457|gb|ABO06550.1| permease [Burkholderia mallei NCTC 10247]
 gi|148027671|gb|EDK85692.1| permease [Burkholderia mallei 2002721280]
 gi|160699378|gb|EDP89348.1| permease [Burkholderia mallei ATCC 10399]
          Length = 313

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 95  RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RLG  L+ +L  M   +P +  L   +++F  L  G ++       F +  + +W +  S
Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +     +P  L  V R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++
Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252


>gi|322371333|ref|ZP_08045885.1| sugar ABC transporter permease protein [Haladaptatus
           paucihalophilus DX253]
 gi|320549323|gb|EFW90985.1| sugar ABC transporter permease protein [Haladaptatus
           paucihalophilus DX253]
          Length = 292

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 17/109 (15%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS---MY 155
           ++VP  +IM + P++G LT       +LY  K      AA+  I T   +N+ F+   M 
Sbjct: 129 LIVPFFEIMSNPPVIGALT------GSLYNTK------AAL--ILTYTFFNLPFAVWIMK 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +PR L+E ++    S W+ F+ + +P + PG+    +++    W
Sbjct: 175 NYFDGVPRSLDEQAQVDGCSTWEGFFKVILPVAKPGIAATAILAFIFSW 223


>gi|294789947|ref|ZP_06755167.1| choline transporter [Simonsiella muelleri ATCC 29453]
 gi|294482113|gb|EFG29820.1| choline transporter [Simonsiella muelleri ATCC 29453]
          Length = 517

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF       
Sbjct: 42  ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ------ 95

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + Y  L  I + +++   SF LS WQ    + +P ++P ++
Sbjct: 96  --NTYLGLTQIDQSIQDAYTSFGLSRWQSLCRIELPMALPAMI 136


>gi|282861503|ref|ZP_06270567.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282563319|gb|EFB68857.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 301

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IPR+++E  +   L+ +  FW L +P + PGL      S    W  V  +   +VGD  
Sbjct: 188 TIPREIDESGQVDGLTPFGTFWRLILPLAKPGLAVTAFYSFITAWGEVAYASAFMVGDEN 247

Query: 220 IPLPG 224
           + L G
Sbjct: 248 LTLAG 252


>gi|149915780|ref|ZP_01904305.1| probable sugar ABC transporter, permease protein [Roseobacter sp.
           AzwK-3b]
 gi|149810362|gb|EDM70207.1| probable sugar ABC transporter, permease protein [Roseobacter sp.
           AzwK-3b]
          Length = 315

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164
           P +G   + + +F    P    +IG    A +AI  +  W  T F M      L +IP  
Sbjct: 150 PQIGLFNYVIAFFTGADPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 209

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + E +   R S W++FW + VP  +P L+
Sbjct: 210 IYEAAECDRASKWRQFWTITVPMVLPFLM 238


>gi|118586955|ref|ZP_01544387.1| ABC-type aliphatic sulfonate transport system, permease component
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432577|gb|EAV39311.1| ABC-type aliphatic sulfonate transport system, permease component
           [Oenococcus oeni ATCC BAA-1163]
          Length = 251

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+L   P     PL++  +     +    +S+    G  + +  N   G ++      E+
Sbjct: 94  QMLRNIPHLALIPLIILVIGIGEPSKIFLVSV----GCMFPMYINTYHGVTSIDKGLVEM 149

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+ ++  + +  II PG  P  + G   A G  W   IV+E  +       ++G+G  
Sbjct: 150 GRSYGLSNSQVFFKIIFPGALPTILMGVRYALGVMWTTLIVAETVA------TSSGIGYM 203

Query: 543 IAESTEKGSFPEVVLGVLIMCCF 565
             E+ +      V+L +LI   F
Sbjct: 204 ANEAEQFTDMSTVILCILIYALF 226


>gi|312139029|ref|YP_004006365.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888368|emb|CBH47680.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 285

 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + V  M    Y  + N+ R + E +R F L+GW+      +P ++PG++  + + +S
Sbjct: 157 IAVATVAPMYAYTYLGVRNVDRKMVEAARGFGLTGWRLVAEAILPAALPGVLMGLRICLS 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253
                ++A+E +   +      GIG  + LA +    D + +   +   LG++F
Sbjct: 217 LSITGLIAAEQVGTRE------GIGYLVTLAQEYNRTDYMVLCVVLYAALGLVF 264


>gi|293392031|ref|ZP_06636365.1| putrescine transport system permease protein PotH [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952565|gb|EFE02684.1| putrescine transport system permease protein PotH [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 21/98 (21%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y S+  +   L E ++    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEVAVIIGLVYLLLPFMILPLYSSIEKLDGRLLEAAKDLGANAFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG+V   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|329938447|ref|ZP_08287872.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302420|gb|EGG46311.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
          Length = 297

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 14/134 (10%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            V A L  + R +  VL P+L + Q++P +      +V+F      KV+   L A F + 
Sbjct: 115 LVCAVLITQFRTVERVLFPLLILTQTVPKVAMAPLLIVWFGIGISSKVLTVALIAFFPLL 174

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMS 199
            + +     + Y+ +        E+ RSF  S  Q   +L +P ++P    GL   +++S
Sbjct: 175 INAILGFRSAAYEQV--------EMLRSFGASRLQVMRHLQIPSALPHIFAGLEVAVILS 226

Query: 200 MSGGWF--FVVASE 211
           ++G     FV +SE
Sbjct: 227 VTGAVVAEFVGSSE 240


>gi|295103441|emb|CBL00985.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Faecalibacterium prausnitzii SL3/3]
          Length = 256

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  QL+ A P   F  L +  V    L+  + +S LM+    +  +   IAGA     
Sbjct: 92  LAPVMQLVKATPVASFIILALVWVRGSALS--VLISFLMVLPVLYGAVRTGIAGADV--- 146

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              E+A+ F +   R  R + LP + P +  G   A G  W + + +EV
Sbjct: 147 QLLEMAAVFRLPAGRRLRAVWLPAVLPAFRQGCSVALGICWKSGVAAEV 195


>gi|302537486|ref|ZP_07289828.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302446381|gb|EFL18197.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 322

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 10/178 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA ++ +P+G+ IG+   +++ + P  +L     A    P+ V  +     +       +
Sbjct: 141 IAVVVAVPLGLLIGWYRPVAAFLGPLLELFRNTAALALLPVFVLLLGIGETSK----VSI 196

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +++   W IL N I+           +A S  ++  R ++ +ILP   P   TG I   G
Sbjct: 197 VVYACVWPILLNTISAVGNADPTLVRLARSMDLSTPRLFQKVILPASVPAVFTG-IRLAG 255

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                SI+  VA+   +     GLG  I  S    + P++  G++ +    +A N+ L
Sbjct: 256 A---VSILVLVAA--EMIGAKAGLGYLINASQFNFAIPQMYAGIVTISAIGVAFNQVL 308


>gi|229815114|ref|ZP_04445451.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM
           13280]
 gi|229809344|gb|EEP45109.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM
           13280]
          Length = 309

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 9/164 (5%)

Query: 65  ASRTTLRMLSAMVISL---LFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFT 119
           A+ T L  + A+VI +   + T VY T  A S R+  ++ P +D++  IP  I GF    
Sbjct: 92  AAGTALVTVGALVIGVPLGVGTAVYLTEIA-SARVRALISPAVDLLAGIPSIIYGFFGMV 150

Query: 120 VV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           ++  +  +L  G   GA L A F +    V  +T     +L +IP  + E S +   + W
Sbjct: 151 IIRPFVADLTGGLGFGA-LTAWFVLAIMIVPTITTLTIDALNSIPMGIREASFAMGATKW 209

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           Q  + + +P +  G+V  +++ M       +A  M+V    VIP
Sbjct: 210 QTIYKVVLPAAKFGIVDAVVLGMGRAIGETMAVLMVVGNAPVIP 253


>gi|91780784|ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693444|gb|ABE36641.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 273

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV     IA+++ + +G+ IG+   + S ++P  Q L   P   + PL +      +  P
Sbjct: 78  RVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSWIPLAIIWFGIAN-KP 136

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +    L+  G+ + +L + I G      D     +    +     R+I+ P   P   +
Sbjct: 137 AI---FLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQMLLRHIVFPAALPSIFS 193

Query: 509 GAITACGGAWNASIVSEVAS 528
           G   A G AW  ++ +E+ +
Sbjct: 194 GLRIAIGSAWMLTVTAEMVA 213


>gi|255283392|ref|ZP_05347947.1| ABC transporter, permease protein [Bryantella formatexigens DSM
           14469]
 gi|255266040|gb|EET59245.1| ABC transporter, permease protein [Bryantella formatexigens DSM
           14469]
          Length = 266

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160
           P++ +++ I  + +L F V++         +G  ++ AI  IF +  + +  S   ++ N
Sbjct: 101 PVIQLLRPIAPVAWLPFIVLW---------VGIGDVPAIAIIFIAGFFPVLLSTAAAVKN 151

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + R   +V+ +FRLS  +    +  P   P +  ++ M++   W F+V+ EM+
Sbjct: 152 VDRVYLKVAENFRLSQPETLLKIVFPAVFPQIASSLHMALGTCWIFLVSGEMV 204


>gi|145636051|ref|ZP_01791721.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae PittHH]
 gi|145270573|gb|EDK10506.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
           influenzae PittHH]
          Length = 286

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P +++  E+A I  +    +  M   +Y ++  +   L E +R    + +Q+F+ + +P 
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203

Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219
           +MPG++   ++ +  + G F+V      +++++VG+ +
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241


>gi|78777545|ref|YP_393860.1| binding-protein dependent transport system inner membrane protein
           [Sulfurimonas denitrificans DSM 1251]
 gi|78498085|gb|ABB44625.1| Binding-protein-dependent transport systems inner membrane
           component [Sulfurimonas denitrificans DSM 1251]
          Length = 260

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%)

Query: 67  RTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TTL R      ISLLF      LA       M+  PI+ I+  +P + ++   +++F  
Sbjct: 68  KTTLYRSSVGFGISLLFGTALGLLAGFFATASMMSRPIVTILVGMPPIAWIVLAMIWFG- 126

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 +G E   IF +  +    +     Q    +  DL+E+++SF      KF  +  
Sbjct: 127 ------MGDE-TVIFTVIVASFPIIFVGALQGTRTLDGDLKEMAKSFNFPWHMKFLDVYF 179

Query: 186 P--FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           P  FS     W   + M+  W  V+ +E++   D      GIG+ +A A  + D    L 
Sbjct: 180 PHIFSYVFPAWVSALGMA--WKIVIMAELLATSD------GIGASLATARSQLDTPTALA 231

Query: 244 AMLTMLGVIFLYDQLLFRPM 263
            +  M+G +   + ++  P+
Sbjct: 232 IVSIMIGSLMFIEYIILEPI 251


Searching..................................................done


Results from round 2




>gi|255764497|ref|YP_003065010.2| ABC transporter permease [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254547848|gb|ACT57070.2| ABC transporter permease [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 587

 Score =  646 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 587/587 (100%), Positives = 587/587 (100%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS
Sbjct: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV
Sbjct: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF
Sbjct: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA
Sbjct: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY
Sbjct: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
           SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA
Sbjct: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP
Sbjct: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK
Sbjct: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG
Sbjct: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL
Sbjct: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587


>gi|115352494|ref|YP_774333.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|172061350|ref|YP_001809002.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|115282482|gb|ABI87999.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|171993867|gb|ACB64786.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 585

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 313/574 (54%), Positives = 408/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W   V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWSGFVLICTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  +              IG +       D 
Sbjct: 3   VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ +    +  G            + P   +L + P   F   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +F
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNF 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +   +L M   +LA ++FL+ PL  +  +
Sbjct: 243 GAIGWVILTMTVVILAYDQFLFRPLIAWADK 273


>gi|171321263|ref|ZP_02910228.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171093457|gb|EDT38635.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 585

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 314/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W   V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVWVGLRPRLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  +              IG +       D 
Sbjct: 3   VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ + +  +  G            + P   +L + P   F   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +F
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNF 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +   +L M   +LA ++FL+ PL  +  +
Sbjct: 243 GAIGWVILTMTVVILAYDQFLFRPLIAWADK 273


>gi|107025965|ref|YP_623476.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116692851|ref|YP_838384.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170737883|ref|YP_001779143.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|105895339|gb|ABF78503.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116650851|gb|ABK11491.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169820071|gb|ACA94653.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 584

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 304/574 (52%), Positives = 406/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++    G          ++  S +R S + DI W   V  + + +AW+ + ++    T 
Sbjct: 318 LRVPSVTG--------TRVREASARRSSRIGDIVWGAFVILLTVYVAWRVVSFVATGVTV 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           I F  P       + + +    D   F ++ G+              IG +       D 
Sbjct: 3   ISFFDPNRTANASAWRVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  +I + +  +  G            + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++FL+ PL  +  +
Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273


>gi|206560942|ref|YP_002231707.1| binding-protein-dependent transport system protein [Burkholderia
           cenocepacia J2315]
 gi|198036984|emb|CAR52905.1| binding-protein-dependent transport system protein [Burkholderia
           cenocepacia J2315]
          Length = 585

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 312/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPSGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584


>gi|78067194|ref|YP_369963.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77967939|gb|ABB09319.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 585

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPG+G+Y+A AI +++L AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNLGAIGWVILTMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P         ++ S  +DI W  +V      + W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFSLPR------VEKKASRTVDIAWAILVLIGTAYVVWRVVSFVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV VLI IAS+IW+PVG+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVAVLIAIASVIWVPVGVWIGLRPRLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPAFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  +              IG +       D 
Sbjct: 3   VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ + +  +  G            + P   +L + P   F   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +   +L M   +LA ++FL+ PL  +  +
Sbjct: 243 GAIGWVILTMSVVILAYDQFLFRPLVAWADK 273


>gi|254247536|ref|ZP_04940857.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124872312|gb|EAY64028.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 585

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 584



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 10/273 (3%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQ 374
             + F  P       + + +    D   F ++  +              IG +       
Sbjct: 1   MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL 60

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T  R++  ++ +    +  G            + P   +L + P   F 
Sbjct: 61  DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI 120

Query: 435 PLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              V+          L   L     +     W + F+        P D  EV+  FH+T 
Sbjct: 121 SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+ +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    
Sbjct: 181 WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK 240

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +F  +   +L M   +LA ++ L+ PL  +  +
Sbjct: 241 NFGAIGWVILTMTVVILAYDQLLFRPLIAWADK 273


>gi|134296585|ref|YP_001120320.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134139742|gb|ABO55485.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 585

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPVS-GAMRFSLPK------VEKKASRTVDIAWAVLVVLATAYIVWRVVSFVATGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +VI LG IT+ RVVVLI IAS++W+P+G+ +G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVIVLGLITLLRVVVLISIASVVWVPIGVLVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 93/271 (34%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  +              I  +       D 
Sbjct: 3   VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ +    +  G            + P   +L + P   F   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAIGWVILTMTVVILAYDQLLFRPLIAWADK 273


>gi|167585833|ref|ZP_02378221.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia ubonensis Bu]
          Length = 584

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N +    + R+ PN +D +AF L+I +I + + G  ET  P   ++   I+LD  +LP+Y
Sbjct: 8   NRIANASAWRVLPNRWDFIAFPLIICVIAMAVVGFHETMAPITTLNTQKISLDPSNLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  ALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L 
Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLE 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + 
Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDKNLGAIGWV 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +L M  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  
Sbjct: 248 ILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F+  +    +L  + G +RF  P         ++ S+  DI W  +V      + W+ +
Sbjct: 308 LFAKAARIPLRLPLS-GAVRFTLPR------VEKKASFAADIAWALLVLAGTAYVVWRVV 360

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++    T  +V +V  LG IT+ RV+VLI IAS+IW+P+G+WIG RP ++ K+QP AQ 
Sbjct: 361 SFVAAGVTMAEVGHVFTLGLITLLRVIVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQF 420

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP  V  ++++ LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+
Sbjct: 421 LAAFPANLLFPAFVIVIAHFRLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG+  +   GLGAYIA
Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIA 540

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++T  G FP+++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 541 QTTAAGDFPKIILGITVMSLFVTLFNRLLWRPLYAYAESKLRL 583


>gi|172063625|ref|YP_001811276.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171996142|gb|ACB67060.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 584

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 304/574 (52%), Positives = 403/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +     G           +  S +  S + DI W   V  + + + W+ +G++    T 
Sbjct: 318 LRAPSRNGAP--------SRAASARGSSRLGDIVWGTFVILITVYVGWRVVGFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 GDVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 99/271 (36%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DV 376
           IRF  P       + + +    D   F ++ G+           +    T Q      D 
Sbjct: 3   IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ + +  +  G        +   + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++FL+ PL  +  +
Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273


>gi|107023335|ref|YP_621662.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116690418|ref|YP_836041.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170733738|ref|YP_001765685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|105893524|gb|ABF76689.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116648507|gb|ABK09148.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169816980|gb|ACA91563.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 585

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++  AI + +LTM  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P+        ++ S  +DI W  +V      I W+ + ++    T 
Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 10/273 (3%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQ 374
             + F  P       + + +    D   F ++  +              IG +       
Sbjct: 1   MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL 60

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T  R++  ++ +    +  G            + P   +L + P   F 
Sbjct: 61  DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI 120

Query: 435 PLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              V+          L   L     +     W + F+        P D  EV+  FH+T 
Sbjct: 121 SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+ +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    
Sbjct: 181 WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK 240

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +F  +   +L M   +LA ++ L+ PL  +  +
Sbjct: 241 NFGAIGWVILTMTVVILAYDQLLFRPLIAWADK 273


>gi|307728994|ref|YP_003906218.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583529|gb|ADN56927.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 583

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 308/574 (53%), Positives = 406/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKNQTISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAITEKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++   L   RF  P+        Q+ S + DI W  +V    + + ++   Y+    + 
Sbjct: 317 LRMP-ALQGPRFQIPQ-------IQKSSRVGDIVWGALVLIGTVYVVYRVFMYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVGHVFLLGLITLLRVVLLIALASLIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIAIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAARNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVVAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582


>gi|254250281|ref|ZP_04943601.1| ABC-type anion transport system, duplicated permease component
           [Burkholderia cenocepacia PC184]
 gi|124876782|gb|EAY66772.1| ABC-type anion transport system, duplicated permease component
           [Burkholderia cenocepacia PC184]
          Length = 584

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 304/574 (52%), Positives = 405/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWMLSQAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++    G          +   S +R S + DI W   V  + + +AW+ + ++    T 
Sbjct: 318 LRVPSLTG--------TRVHGASARRSSRIGDIVWGVFVILLTVYVAWRVVSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASMIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           I F  P       + + +    D   F ++ G+              IG +       D 
Sbjct: 3   ISFFDPNRTANASAWRVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  +I + +  +  G            + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++FL+ PL  +  +
Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273


>gi|323525236|ref|YP_004227389.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323382238|gb|ADX54329.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 583

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAAAITEKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L   L   RF  P+        Q+ S + DI W  +V    + + ++   Y+    + 
Sbjct: 317 FRLP-ALQGPRFPIPQM-------QKSSRVGDIVWGALVLLGTVYVVYRVFIYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVGHVFLLGLITLLRVVLLIALASVIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIVIVRFHLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRVAAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|238028311|ref|YP_002912542.1| hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1]
 gi|237877505|gb|ACR29838.1| Hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1]
          Length = 584

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 309/583 (53%), Positives = 406/583 (69%), Gaps = 7/583 (1%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N +    + R+ PN +D +AF L++ +I +   G  ET  P   +    I+LD  +LP+Y
Sbjct: 8   NRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AM+ SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  ALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P +V GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L 
Sbjct: 128 ALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLE 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPFSMPGLVWNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + 
Sbjct: 188 VPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGWV 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +LTM  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  
Sbjct: 248 ILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F+ ++    +L  +    RF  P         ++ S + DI W  +V      + W+ +
Sbjct: 308 LFAKMARLPFRLP-SFDAARFALPR------VEKQASRVADIGWAILVLLGTAYVVWRVV 360

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++    T  +V +V  LG  T+ RVVVLI+IAS+IW+P+G+WIG RP ++ K QP AQ 
Sbjct: 361 AFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQF 420

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP+ V  ++ Y LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+
Sbjct: 421 LAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F I GW+WWR  ILPGI PYY+TGAITA GGAWNASIVSE   WG       GLGAYIA
Sbjct: 481 NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIA 540

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + T  G +P++++G+ +M  FV   NR LW PLY Y    LRL
Sbjct: 541 QMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583



 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 94/266 (35%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  V    A         I  +       D   +  
Sbjct: 7   PNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP----LV 437
               T  R++  +I + +  +  G            + P   +L + P   +        
Sbjct: 67  YALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ +        L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  V   + +  G W   + SE  + G+  +   G+GAY+A++  + +   V  
Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILTMTVVILAYDQLLFRPLVAWADK 272


>gi|295675893|ref|YP_003604417.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295435736|gb|ADG14906.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 583

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 308/574 (53%), Positives = 408/574 (71%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ ++PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLAMFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +  V
Sbjct: 257 AYDQLLFRPLVAWADKFRMEFTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFARAAR-V 315

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +         RFH P+       +++ S + DI W  +V    + + ++   Y+    T 
Sbjct: 316 RFQLPAFSAPRFHIPQ-------SEKNSKLGDIIWAAIVLLATVYVVYRVFLYVRTGVTL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++ +V  LG +T+ RVVVLI IAS+IW+PVG+ IG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 369 DEIGHVFLLGLVTLLRVVVLIAIASVIWVPVGVLIGLRPALAEKVQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGAS++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   L   GLGAYIA++T  G +P
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRLAAHGLGAYIAQTTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 582


>gi|161524071|ref|YP_001579083.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189351168|ref|YP_001946796.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|221199378|ref|ZP_03572422.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
 gi|221205720|ref|ZP_03578735.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
 gi|221211591|ref|ZP_03584570.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|160341500|gb|ABX14586.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189335190|dbj|BAG44260.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221168952|gb|EEE01420.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|221174558|gb|EEE06990.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
 gi|221180663|gb|EEE13066.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
          Length = 584

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 309/574 (53%), Positives = 406/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+GWQ+FW L VPFSMPGLV
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLV 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +   F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  T  +        F      ++ S + D+ W  VV      + W+ + ++    T 
Sbjct: 317 LRLSPTRAM-------RFTLPRVEKKASRVADVTWAVVVLLATAYVLWRVMSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI IAS++W+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 DEVGHVFVLGLITLLRVVVLIAIASVVWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA+ T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAQMTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 95/266 (35%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  +              IG + +     D   +  
Sbjct: 7   PNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ +    +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+TGW+ +  +
Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  V   + +  G W   + SE  + G+  +   G+GAY+AE+  + +   V  
Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272


>gi|311279626|ref|YP_003941857.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308748821|gb|ADO48573.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 608

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 298/575 (51%), Positives = 402/575 (69%), Gaps = 8/575 (1%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R + PN +D++AF L+I +I +++ G  +T +P   +    I+LD  +LP+YA RTTLRM
Sbjct: 41  RHLKPNRWDIVAFPLIICLIAMMVTGFNQTMMPIVSLKTQTISLDPANLPEYALRTTLRM 100

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L AM+ +LLFT VY TLAA+SRR   +L+PILDI+QS+P+LG+++FTV +F+ L+PG+V+
Sbjct: 101 LVAMIAALLFTLVYGTLAARSRRAEKILIPILDILQSVPVLGYISFTVTFFIALFPGRVL 160

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G ELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPF+MPGL
Sbjct: 161 GVELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLVEVSRGFHLTPWQRFWKLDVPFAMPGL 220

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFF+VASE I VG+    LPGIG+Y+A AI  +++ AI + +L M  VI
Sbjct: 221 IWNMMMSMSGGWFFIVASEAITVGNNTFTLPGIGAYLAQAILSKNMHAIGWVLLAMTLVI 280

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
             YDQLLFRP++ W++KFR+E T       SWVL L R+T  +           SP    
Sbjct: 281 LAYDQLLFRPLVAWADKFRMENTRSGSAPTSWVLNLIRRTRLIH-------RLLSPFGFL 333

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  + R    +            S +R+S ++DI W  +V  +A+ +AW+ I Y+    +
Sbjct: 334 LSGMARIPLHVPLPH-WGAASPRSARRLSRVVDILWGTLVILLALYVAWRVISYVSAGVS 392

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V +V  LG  T+ RV VLI+I+S++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+
Sbjct: 393 LSEVGHVFLLGFATLLRVSVLILISSLVWVPLGVMIGMRPALAGKIQPIAQFLAAFPANL 452

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ V  + ++ LNPN+WLS L++ GTQWYILFNV+AG SA PND++E A++FHI GW+
Sbjct: 453 LFPIFVITIVHFQLNPNIWLSPLIVLGTQWYILFNVVAGTSAIPNDYREAAANFHIRGWQ 512

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR ++LPGIFPYY+TGAITA GGAWNASIV+E   WG   L   G+GAYIA++T  G F
Sbjct: 513 WWREVMLPGIFPYYITGAITASGGAWNASIVAEFVQWGDTQLTAYGIGAYIAKTTAAGDF 572

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P+++LGV +M  FV   NR LW PLY Y     R+
Sbjct: 573 PKIILGVAVMSLFVTLFNRLLWRPLYAYAESRFRI 607


>gi|83719463|ref|YP_441452.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|167580221|ref|ZP_02373095.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
 gi|167618330|ref|ZP_02386961.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257139872|ref|ZP_05588134.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|83653288|gb|ABC37351.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 585

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 312/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQFLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + +AW+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTLYVAWRVFAYVKTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKAQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|167561998|ref|ZP_02354914.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
          Length = 584

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N +    + R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+Y
Sbjct: 8   NRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L 
Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLE 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +Q+L A+ + 
Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGWV 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +LTM  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  
Sbjct: 248 ILTMTIVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           FF+  +    ++  +L  +RF  P         ++ S + DI W  +V    I +  +  
Sbjct: 308 FFAKAARIPLRVP-SLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVF 360

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+    T  +V +V  LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ 
Sbjct: 361 VYVKTGVTLAEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQF 420

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A+
Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAAT 480

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   ++  GLGAYIA
Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIA 540

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++T  G +P+++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 541 QTTAAGDYPKIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  V    A         I  +       D   +  
Sbjct: 7   PNRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ + +  +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +   V  
Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILTMTIVILAYDQLLFRPLVAWADK 272


>gi|91782448|ref|YP_557654.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91686402|gb|ABE29602.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia xenovorans LB400]
          Length = 583

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 307/574 (53%), Positives = 404/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L          F     Q+   Q+ S + DI W  +V    + + ++   Y+    + 
Sbjct: 317 LRLP--------AFQGPRFQIPQMQKSSRVGDIVWAALVLVTTVYVVYRVFMYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|167569249|ref|ZP_02362123.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 584

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N +    + R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+Y
Sbjct: 8   NRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L 
Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLE 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +Q+L A+ + 
Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGWV 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +LTM  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  
Sbjct: 248 ILTMTIVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           FF+  +    ++  +L  +RF  P         ++ S + DI W  +V    I +  +  
Sbjct: 308 FFAKAARIPLRVP-SLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVF 360

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+    T  +V +V  LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ 
Sbjct: 361 VYVKTGVTLAEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQF 420

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A+
Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAAT 480

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   ++  GLGAYIA
Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIA 540

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++T  G +P+++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 541 QTTAAGDYPKIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  V    A         I  +       D   +  
Sbjct: 7   PNRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ + +  +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +   V  
Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILTMTIVILAYDQLLFRPLVAWADK 272


>gi|330817956|ref|YP_004361661.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3]
 gi|327370349|gb|AEA61705.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3]
          Length = 584

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 305/583 (52%), Positives = 402/583 (68%), Gaps = 7/583 (1%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N +    + R+ PN +D +AF L++ +I +   G  ET  P   +    I+LD  +LP+Y
Sbjct: 8   NRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P +V GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L 
Sbjct: 128 ALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKLE 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPFSMPGLVWNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI ++++ AI + 
Sbjct: 188 VPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGWV 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +L M  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +         
Sbjct: 248 ILAMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIH-------Q 300

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
              P    + +  R    +       F      ++ S   DI W  +V      + W+ +
Sbjct: 301 LLVPAGWLLARAARLPFRLPSFDAARFALPRVEKQASRAADIGWAILVLIGTAYVVWRVV 360

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++    T  +V +V  LG  T+ RV+VLI IAS++W+P+G+WIG RP ++ K QP AQ 
Sbjct: 361 SFVATGVTLAEVGHVFLLGLATLLRVLVLIAIASLVWVPIGVWIGLRPALAEKAQPIAQF 420

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+
Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE+  WG   ++  GLGAYI+
Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTKIQAHGLGAYIS 540

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           E T  G +P++++G+ +M  FV   NR LW PLY Y    LRL
Sbjct: 541 EMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 94/266 (35%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  V    A         IG +       D   +  
Sbjct: 7   PNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP----LV 437
               T  R++  ++ + +  +  G            + P   +L + P   +        
Sbjct: 67  YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ +        L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  V   + +  G W   + SE  + G+  +   G+GAY+A++    +   +  
Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272


>gi|167841086|ref|ZP_02467770.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 585

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 311/574 (54%), Positives = 412/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQKISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G
Sbjct: 78  AAMVASLAFTLVYGTLAAKSRRAGIVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIAEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G +RF  P         ++ S+  DI W  +V      + W+ +G++    T 
Sbjct: 318 LRLPLS-GAVRFTLPR------VEKKASFAADIVWAILVLAGTAYVVWRVVGFVSTGVTM 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVV+LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVVLLIALASVVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ Y LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARYRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE+  WG   ++  GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTRIQAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584


>gi|254251726|ref|ZP_04945044.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
 gi|124894335|gb|EAY68215.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
          Length = 584

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 313/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G IRF  P         ++ S + D  W  VV      + W+   ++    T 
Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V  LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVIVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 92/266 (34%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  V              IG +       D   +  
Sbjct: 7   PNRTANASAWRVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ +    +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +   V  
Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272


>gi|187923127|ref|YP_001894769.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714321|gb|ACD15545.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 583

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 307/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICVIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L          F     Q+   Q+ S + D+ W  +V    + + ++ + Y+    + 
Sbjct: 317 FRLP--------AFQGPRFQIPQMQKSSRVGDMVWAALVLLATVYVVYRVVIYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI IAS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVWHVFVLGLITLLRVVVLIAIASVIWVPVGVLIGLRPALAEKIQPIAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|148258661|ref|YP_001243246.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410834|gb|ABQ39340.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 577

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 332/587 (56%), Positives = 422/587 (71%), Gaps = 11/587 (1%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L +     +   + PNI+D++A ++V+G + ++++G ++TT P   +D  P++LD  +
Sbjct: 1   MMLQDFRTAVLRETVRPNIWDVVALIIVVGAMVLIVYGGEQTTQPLSALDTAPVSLDPSN 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A+  SL+FTFVYA LAAKSRR  +VL+P+LDI+QS+PILGFLTFTV
Sbjct: 61  LPLYALRTTLRMLLAITCSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F
Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A
Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I  A+LTML VI  YDQLLFRP++ W++KFR E+T    P  SW+L LFR+T  LR    
Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGDPPSSWMLDLFRRTRALR---- 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                   LS     L R    +R ++P  +         S ++D  W  VV        
Sbjct: 297 -------KLSVPFAALNRAFSNLRLNWPTAWSGPVRRAPPSQLVDGLWLAVVVIGCAYAG 349

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W++  Y+       DVL     G IT+ RV VLI +AS+IW+PVG+WIG RP ++ +IQP
Sbjct: 350 WKTYLYLSATLAPSDVLSATGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERIQP 409

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            AQ LAAFPAN+ FP+ V  +  Y LN N+WLS LMI GTQWYILFNVIAGASAFP D +
Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNANVWLSPLMILGTQWYILFNVIAGASAFPTDLR 469

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A+S H+TGWRWW  ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG  HL  +GLG
Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIA +TE+G FP VVLG+ +MC  V   NR LW PLY +G R LRL
Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576


>gi|221209695|ref|ZP_03582676.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|221170383|gb|EEE02849.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
          Length = 596

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 306/574 (53%), Positives = 399/574 (69%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 30  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKISLDPSNLPEYALRTTLRML 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 90  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 150 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 209

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 210 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 269

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E ++      SW+L L R+T  +            P    +
Sbjct: 270 AYDQLLFRPLVAWADKFRMENSSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 322

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  R    +R        +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 323 SQAARVPLRLRA-LDAMRARETAQRSPSRFGDFVWAAAVIVLTVYVAARVVSYVSTGVTI 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 382 DDVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 442 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 502 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 562 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 595


>gi|170691899|ref|ZP_02883063.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143183|gb|EDT11347.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 583

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 309/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I II +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI  ++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAIVVKNLHAIGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L   L   RF  P+        Q+ S + DI W  +V    + + ++   Y+    + 
Sbjct: 317 FRLP-ALQAPRFPIPQ-------IQKSSRIGDIVWGALVLVATVYVVYRVFIYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVGHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIVIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|206563802|ref|YP_002234565.1| ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039842|emb|CAR55817.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315]
          Length = 584

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 300/574 (52%), Positives = 405/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  ET  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++    G          ++  S++R S + DI W   V  + + + W+ + ++    T 
Sbjct: 318 LRVPSLAG--------TRVRGASSRRSSRIGDIVWGAFVIALTLYVVWRVVSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 GEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G FP
Sbjct: 490 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           IRF  P       + + +    D   F ++  V              IG +       D 
Sbjct: 3   IRFFDPNRTANASAWRVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  +I + +  +  G            + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++FL+ PL  +  +
Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273


>gi|296159051|ref|ZP_06841878.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890612|gb|EFG70403.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 583

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 307/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L AI + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +       F+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L          F     Q+   Q+ S + DI W  +V    + + ++ + Y+    + 
Sbjct: 317 LRLP--------AFQGPRFQIPQMQKSSRVGDIAWAALVLVTTVYVVYRVVMYVRTGVSL 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 DEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W
Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIV+E   WG   +   GLGAYIA+ST  G +P
Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582


>gi|115358889|ref|YP_776027.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284177|gb|ABI89693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 584

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 302/574 (52%), Positives = 403/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQTARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +     G           +  S +  S + DI W   V  + + +AW+ + ++    T 
Sbjct: 318 LRAPSLAGA--------RSRAASVRGSSRIGDIVWGTFVILITVYVAWRVVSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 DEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 99/271 (36%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DV 376
           IRF  P       + + +    D   F ++ G+           +    T Q      D 
Sbjct: 3   IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ + +  +  G        I   + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++FL+ PL  +  +
Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273


>gi|146337816|ref|YP_001202864.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146190622|emb|CAL74624.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 577

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 329/587 (56%), Positives = 428/587 (72%), Gaps = 11/587 (1%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L ++    +   + PNI+D++A ++V+G + ++++G ++TT+P   +D  P++LD  +
Sbjct: 1   MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A++ SL+FTFVYA LAAKSRR  +VL+P+LDI+QS+PILGFLTFTV
Sbjct: 61  LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F
Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A
Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I  A+LTML VI  YDQLLFRP++ W++KFR E+T    P  SW+L LFR+T  LR    
Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALR---- 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                   LS     + RT   +R ++P+ +     +   S ++D  W   V        
Sbjct: 297 -------SLSIPFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYAG 349

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W++  Y+       DV   I  G IT+ RV VLI +AS+IW+PVG+WIG RP ++ ++QP
Sbjct: 350 WKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQP 409

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            AQ LAAFPAN+ FP+ V  +  Y LN ++WLS LMI GTQWYILFNVIAGASAFP+D +
Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLR 469

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A+S H+TGWRWW  ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG  HL  +GLG
Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIA +TE+G FP VVLG+ +MC  V   NR LW PLY +G R LRL
Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576


>gi|254254292|ref|ZP_04947609.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
 gi|124898937|gb|EAY70780.1| ABC-type anion transport system duplicated permease component
           [Burkholderia dolosa AUO158]
          Length = 584

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 311/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + +L M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+  +   
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGSAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +L  + G IRF  P         ++ S + D  W  VV      + W+   ++    T 
Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V  LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ 
Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W
Sbjct: 430 FPVFVVVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 92/266 (34%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  +              IG +       D   +  
Sbjct: 7   PNRTAHASAWRVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ +    +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +   V  
Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272


>gi|327396383|dbj|BAK13805.1| glycine betaine/L-proline transport system permease protein ProW
           [Pantoea ananatis AJ13355]
          Length = 578

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 299/575 (52%), Positives = 404/575 (70%), Gaps = 9/575 (1%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+ PN++D +AF L+I +I ++  G  +T +P D +    I+LD  +LP+YA RTTLR
Sbjct: 11  NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML AM+ SL+F+ +Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V
Sbjct: 71  MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELAAIFA+FTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L  PF++PG
Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWNMMMSMSGGWFF+VASE I VG+    LPG+G Y+A AI  +D+ A+ + +LTM+ V
Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I  YDQLLFRP++ W++KFR+E T       SWV  L R+T  +  I ++          
Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +     T   +RF          + +R S + DI W   V  + + + ++ I Y+    
Sbjct: 310 RISWRWPTAAPVRFE--------NNTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +V +V  LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN
Sbjct: 362 TLDEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW
Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G 
Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           FP+++LG+ +M  FV   NR LW PLY+Y     R
Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576


>gi|291616142|ref|YP_003518884.1| ProW [Pantoea ananatis LMG 20103]
 gi|291151172|gb|ADD75756.1| ProW [Pantoea ananatis LMG 20103]
          Length = 578

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 299/575 (52%), Positives = 404/575 (70%), Gaps = 9/575 (1%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+ PN++D +AF L+I +I ++  G  +T +P D +    I+LD  +LP+YA RTTLR
Sbjct: 11  NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML AM+ SL+F+ +Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V
Sbjct: 71  MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G ELAAIFA+FTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L  PF++PG
Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWNMMMSMSGGWFF+VASE I VG+    LPG+G Y+A AI  +D+ A+ + +LTM+ V
Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I  YDQLLFRP++ W++KFR+E T       SWV  L R+T  +  I ++          
Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +     T   +RF          + +R S + DI W   V  + + + ++ I Y+    
Sbjct: 310 RISWRWPTAAPVRFE--------NNTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +V +V  LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN
Sbjct: 362 TLNEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW
Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE   WG+  +   GLGAYIA++T  G 
Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           FP+++LG+ +M  FV   NR LW PLY+Y     R
Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576


>gi|78061821|ref|YP_371729.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. 383]
 gi|77969706|gb|ABB11085.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. 383]
          Length = 583

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 301/574 (52%), Positives = 402/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P  ++    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 257 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 316

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +     G           +  S++  S + DI W   V  + + + W+ + ++    T 
Sbjct: 317 LRFPSMKG--------TRARGASSRSSSRIGDIVWGTFVILLTVYVVWRVVTFVATGVTM 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 GEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 429 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP
Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDFP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIILGIAVMSLFVTLFNRVLWRPMYAYAESRLRL 582



 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 94/266 (35%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P       + + +    D   F ++  +              IG +       D   +  
Sbjct: 7   PNRTANASAWRVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ + +  +  G            + P   +L + P   +    V+  
Sbjct: 67  YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P D  EV+  FH+T W+ +  +
Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKL 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    +   V  
Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGW 246

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            ++ M   +LA ++FL+ PL  +  +
Sbjct: 247 VIVAMSVVILAYDQFLFRPLVAWADK 272


>gi|186476907|ref|YP_001858377.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184193366|gb|ACC71331.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 584

 Score =  564 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 309/586 (52%), Positives = 405/586 (69%), Gaps = 8/586 (1%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           F  N      + R+ PN +D +AF L+I +I + + G  ET  P   +   PI+LD  +L
Sbjct: 6   FTLNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPISTLQNAPISLDPANL 65

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P+YA RTTLRML+AMV SL+FT VY TLAAKSRR G VLVPILDI+QS+P+LG+++FTV 
Sbjct: 66  PEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGQVLVPILDILQSVPVLGYISFTVT 125

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+ L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVS+ F L+ WQ+FW
Sbjct: 126 FFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSKGFHLTSWQRFW 185

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPG+GSY+A AI E++L AI
Sbjct: 186 KLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGMGSYLAQAIAEKNLHAI 245

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            + +LTM  VI  YDQ LFRP++ W++KFR+E T+     +SW+L L R+T  +  +   
Sbjct: 246 GWVILTMTVVILAYDQFLFRPLVAWTDKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVP 305

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
               F+  +    +  R +G +RF  P          + S   DI W  +V  V   + +
Sbjct: 306 IGWMFAKAARVPIRWPR-VGPVRFAKP-------VEHKPSKTGDIVWSVIVMLVTAFVVY 357

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           + + Y+    T  +V +V  LG +T+ RV +LI +AS++W+PVG+ IG RP ++ K+QP 
Sbjct: 358 RVVAYVRTGVTLDEVGHVFVLGLLTLLRVTLLIALASVVWLPVGVLIGLRPALAEKVQPL 417

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ LAAFPAN+ FP  V  +  + LNP++WLS L++ GTQWYILFNVIAGASA+PND+KE
Sbjct: 418 AQFLAAFPANLLFPAFVLVIVRFDLNPDIWLSPLIVLGTQWYILFNVIAGASAYPNDYKE 477

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F I GW+WWR  +LPG+FPYYVTGAITA GGAWNASIV+E   WG   +   GLGA
Sbjct: 478 AAKNFRIRGWQWWRQAMLPGVFPYYVTGAITASGGAWNASIVAEAVQWGDTKVAAHGLGA 537

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           YIA+ T  G +P+++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 538 YIAQYTAAGDYPKIILGIAVMSLFVSLFNRVLWRPLYAYAESRLRL 583


>gi|254181361|ref|ZP_04887958.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184211899|gb|EDU08942.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 585

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 311/574 (54%), Positives = 407/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAVAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  V    A         I  +       D 
Sbjct: 3   LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435
             +      T  R++  ++ A    +  G            + P   +L + P   +   
Sbjct: 63  ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122

Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                ++ +    L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273


>gi|53718680|ref|YP_107666.1| putative ABC transporter membrane protein [Burkholderia
           pseudomallei K96243]
 gi|53725139|ref|YP_102518.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|67639868|ref|ZP_00438698.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76811263|ref|YP_332667.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|124384265|ref|YP_001028971.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126441907|ref|YP_001058148.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126449210|ref|YP_001081114.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126453617|ref|YP_001065383.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|134281122|ref|ZP_01767831.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|166999929|ref|ZP_02265758.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|167718626|ref|ZP_02401862.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
 gi|167737653|ref|ZP_02410427.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167814788|ref|ZP_02446468.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167823241|ref|ZP_02454712.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167851450|ref|ZP_02476958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167908611|ref|ZP_02495816.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|217420250|ref|ZP_03451756.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|226194385|ref|ZP_03789983.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811368|ref|YP_002895819.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242315247|ref|ZP_04814263.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254178013|ref|ZP_04884668.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254190761|ref|ZP_04897268.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254199428|ref|ZP_04905794.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254205743|ref|ZP_04912095.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254258247|ref|ZP_04949301.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254298312|ref|ZP_04965764.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|254357899|ref|ZP_04974172.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|52209094|emb|CAH35035.1| putative ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
 gi|52428562|gb|AAU49155.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|76580716|gb|ABA50191.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|124292285|gb|ABN01554.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126221400|gb|ABN84906.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126227259|gb|ABN90799.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|126242080|gb|ABO05173.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134247428|gb|EBA47513.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|147749024|gb|EDK56098.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147753186|gb|EDK60251.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148027026|gb|EDK85047.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|157808237|gb|EDO85407.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157938436|gb|EDO94106.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160699052|gb|EDP89022.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|217397554|gb|EEC37570.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|225933470|gb|EEH29459.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506027|gb|ACQ98345.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238520476|gb|EEP83936.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242138486|gb|EES24888.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|243064050|gb|EES46236.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|254216936|gb|EET06320.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 585

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 311/574 (54%), Positives = 407/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  V    A         I  +       D 
Sbjct: 3   LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435
             +      T  R++  ++ A    +  G            + P   +L + P   +   
Sbjct: 63  ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122

Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                ++ +    L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273


>gi|167918066|ref|ZP_02505157.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 585

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 309/574 (53%), Positives = 405/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM  +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  V    A         I  +       D 
Sbjct: 3   LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435
             +      T  R++  +  A    +  G            + P   +L + P   +   
Sbjct: 63  ANLPEYALRTTLRMLAAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122

Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                ++ +    L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273


>gi|167900084|ref|ZP_02487485.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
 gi|167916728|ref|ZP_02503819.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|254196166|ref|ZP_04902590.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|169652909|gb|EDS85602.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 585

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  V    A         I  +       D 
Sbjct: 3   LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435
             +      T  R++  ++ A    +  G            + P   +L + P   +   
Sbjct: 63  ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122

Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                ++ +    L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273


>gi|221195992|ref|ZP_03569039.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221202666|ref|ZP_03575685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221176600|gb|EEE09028.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221182546|gb|EEE14946.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 583

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I LD  +LP+YA RTTLRML
Sbjct: 17  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            NMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 197 RNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+      SW+L L R+T  +            P    +
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  R    +R  F     +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 310 SQAARVPLRVRA-FDAMRAREKAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582


>gi|161520447|ref|YP_001583874.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353362|ref|YP_001948989.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344497|gb|ABX17582.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337384|dbj|BAG46453.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 583

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G +ET  P   +    I LD  +LP+YA RTTLRML
Sbjct: 17  RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI EQ+L A+ + ++ M  VI 
Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+      SW+L L R+T  +            P    +
Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  R    +R        +  + +  S   D  W   V  + + +A + + Y+    T 
Sbjct: 310 SQAARVPLRVRA-LDVMRARDTAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  +  +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE   +F I GW+W
Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIAE T  G FP
Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582


>gi|121599465|ref|YP_992337.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|121228275|gb|ABM50793.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
          Length = 585

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   ++   I+LD  +L +YA RTTLRML
Sbjct: 18  RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLLEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G
Sbjct: 78  AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI E++L A+ + +L M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +   +  FF+ L+   
Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++  +L  +RF  P         ++ S   DI W   V    + + W+   Y+    T 
Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V  LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ 
Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W
Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T  G +P
Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW PLY Y    LRL
Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  V    A         I  +       D 
Sbjct: 3   LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435
             ++     T  R++  ++ A    +  G            + P   +L + P   +   
Sbjct: 63  ANLLEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122

Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                ++ +    L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + 
Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   +L M   +LA ++ L+ PL  +  +
Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273


>gi|134293957|ref|YP_001117693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134137114|gb|ABO58228.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 584

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 302/574 (52%), Positives = 404/574 (70%), Gaps = 8/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IGI+ + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL EVSR F L+ WQ+FW L  PFSMPGL+
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEAPFSMPGLI 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L A+ + ++ M  VI 
Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNLAAVGWVIVAMSVVIL 257

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T       SW+L + R+T+ +  +   +    S  +   
Sbjct: 258 AYDQLLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARVP 317

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                 +  S++R S + D+ W  VV  + + +AW+ +G++    T 
Sbjct: 318 LRAP--------SVTLARSRGKSSRRSSRVGDLVWAAVVIALTLYVAWRVVGFVATGVTL 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ 
Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F I GW+W
Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR  +LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T  G FP
Sbjct: 490 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 10/271 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           IRF  P       + + +    D   F ++ G+              I  +       D 
Sbjct: 3   IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ + +  +  G            + P   +L + P   +   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  +  P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++    + 
Sbjct: 183 RFWKLEAPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNL 242

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V   ++ M   +LA ++ L+ PL  +  +
Sbjct: 243 AAVGWVIVAMSVVILAYDQLLFRPLVAWADK 273


>gi|148252998|ref|YP_001237583.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405171|gb|ABQ33677.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 585

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 327/587 (55%), Positives = 424/587 (72%), Gaps = 10/587 (1%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M L ++    ++R   PN++DL+A +LVIG + ++++G ++TT+P   +D+ P++LD  +
Sbjct: 8   MRLQDLRLAVLTRAPRPNVWDLIALILVIGAMVLIVYGGKQTTLPLSALDVSPVSLDPAN 67

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRML A+  S +FTF+YA +AAKSRR  MVL+P+LDI+QS+PILGFLTFTV
Sbjct: 68  LPFYALRTTLRMLLAIACSTVFTFIYAAVAAKSRRAEMVLIPLLDILQSVPILGFLTFTV 127

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F+NL+PG+V+GAELA +FAIFTSQ WNMTFSMYQSL N+P+DL+E S+SF LSGWQ+F
Sbjct: 128 VFFLNLFPGRVLGAELACVFAIFTSQAWNMTFSMYQSLRNVPKDLDEASKSFHLSGWQRF 187

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L VPF+MPGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GSY+ALAI+++DL A
Sbjct: 188 WRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGVGSYVALAIEKRDLAA 247

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           I YA+ TML VI +YDQLLFRP++ W++KFR E+T       SW+L LFR+T  LR +  
Sbjct: 248 IGYAIFTMLLVIIVYDQLLFRPIVAWADKFRFEQTASGDAPTSWMLDLFRRTRALRALTL 307

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                    SN   +  R L                    S ++D  WF ++       A
Sbjct: 308 PFAALNRAFSNLSAEWPRALRP----------SSKPGAPPSRLIDALWFAIIGIATGYAA 357

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           +++  Y+  +    DV   +  G  T+ RV+ LI +A++IW+P+G+WIG RP I+ ++QP
Sbjct: 358 YKAYYYLSANLQLSDVYEAVLGGFATLLRVITLIALATLIWVPIGVWIGLRPRIAERVQP 417

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            AQ LAAFPAN+ FP+ V  + +Y LN N+WLS LMI GTQWYILFNVIAGASAFP+D +
Sbjct: 418 LAQFLAAFPANLAFPVFVLWIVHYGLNSNIWLSPLMILGTQWYILFNVIAGASAFPSDLR 477

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A+S H+TGWRWW  +ILPGIFPYYVTGAITA GG+WNASIV+EVASWG  HL  TGLG
Sbjct: 478 EAAASLHLTGWRWWIKVILPGIFPYYVTGAITASGGSWNASIVAEVASWGDTHLSATGLG 537

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIA++TE G FP VVLG+ IMC  V   NR  W PLY +G R LRL
Sbjct: 538 AYIAKATEDGDFPRVVLGIAIMCIMVTLFNRLFWRPLYAFGERRLRL 584


>gi|315121797|ref|YP_004062286.1| ABC transporter permease [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495199|gb|ADR51798.1| ABC transporter permease [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 555

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 423/553 (76%), Positives = 485/553 (87%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +L   +QETTVP DIVDIVPITLDV SLP+YASRTTLRML A+V+SLLFTF+YATLAAKS
Sbjct: 1   MLFRSVQETTVPCDIVDIVPITLDVSSLPKYASRTTLRMLIAIVVSLLFTFIYATLAAKS 60

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RRLGMVL+PILDIMQSIPILGFLTFTV+YF++LYPG+VIGAE AAIFAIFTSQVWNMTFS
Sbjct: 61  RRLGMVLIPILDIMQSIPILGFLTFTVIYFISLYPGRVIGAEFAAIFAIFTSQVWNMTFS 120

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           MYQSLCNIP+DLEEVSRSFRLSGWQKFW L VPFS+PGLVWNMM+SMSGGWFFVVA+EMI
Sbjct: 121 MYQSLCNIPKDLEEVSRSFRLSGWQKFWNLDVPFSIPGLVWNMMISMSGGWFFVVAAEMI 180

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           VVGDTVI LPGIGSY+ALAIKE+ L+++LYAMLTM+GVI LYDQLLFRP+I WSNKFRLE
Sbjct: 181 VVGDTVISLPGIGSYVALAIKERSLVSVLYAMLTMVGVILLYDQLLFRPIIAWSNKFRLE 240

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
           RTT ++ +D WVL LFRKTNFLRF+G+SS+    PLS N  KL R    I+F+FP+N   
Sbjct: 241 RTTAVHSSDPWVLSLFRKTNFLRFLGHSSYKIILPLSCNFNKLYRLFNYIQFYFPDNLGL 300

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
              N+++SY+LDI WF  V  +A+GIAW+S  YI+++  Y D+LYV WLGCITM RVV+L
Sbjct: 301 FSCNKKISYILDIIWFLAVYSIAMGIAWKSFEYIIDNLGYYDILYVFWLGCITMLRVVIL 360

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           IIIA+IIW+P+G+WIG RPHI+SKIQPFAQ LAAFP+N+FFPLVVS + YY LNPN+WLS
Sbjct: 361 IIIATIIWVPIGVWIGMRPHIASKIQPFAQFLAAFPSNIFFPLVVSIIFYYDLNPNIWLS 420

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            LMI GTQWYILFN+I+G SAFPNDFKEV  SFH+TGW  WRY+ILPGIFP+YVTGAITA
Sbjct: 421 SLMILGTQWYILFNIISGTSAFPNDFKEVVQSFHVTGWYRWRYVILPGIFPFYVTGAITA 480

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           CGGAWNASIVSEVASWG+I+LR TGLGAYIAESTEKG+FPEV LG+L+MCCFVL LN FL
Sbjct: 481 CGGAWNASIVSEVASWGNIYLRATGLGAYIAESTEKGNFPEVALGILVMCCFVLFLNIFL 540

Query: 574 WHPLYLYGTRCLR 586
           W PLY Y  R LR
Sbjct: 541 WRPLYRYSARHLR 553


>gi|312115324|ref|YP_004012920.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220453|gb|ADP71821.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 583

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 305/574 (53%), Positives = 389/574 (67%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           + +PN +D++ F+ +  ++  + HG +    P   +   P++LD  +LPQYA  TTLRM 
Sbjct: 21  QAWPNRYDVVVFLALGAVLVAMAHGAKTMQQPLTGLAANPVSLDPANLPQYALLTTLRMF 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SLLFTF+ A LAAKSR+   V++P LDI+QS+P+LGFLTFTVV+F+NL+PG  IG
Sbjct: 81  AALGFSLLFTFIVAPLAAKSRKAERVIIPALDILQSVPVLGFLTFTVVFFLNLFPGSQIG 140

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDLEEV+  FRL+ WQ+FW L VPF+ PGLV
Sbjct: 141 AELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLEEVTEQFRLTPWQRFWKLEVPFATPGLV 200

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VGDT I LPGIGSYIALAI+++++ A+ +A+  M  VI 
Sbjct: 201 WNMMMSMSGGWFFVVASEAISVGDTTITLPGIGSYIALAIEQKNIGAVAWAVGAMGVVIV 260

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           LYDQLLFRP++ WS+KFR+E      P +SWVL L R+T  ++ +              V
Sbjct: 261 LYDQLLFRPIVAWSDKFRVELVASQNPPESWVLNLLRRTRLIQAVNGLLGRIAGLFGGGV 320

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R     R             +     LDI +  V+  V +  AW    Y+     +
Sbjct: 321 STLSRHAPEPRI-----------GKTAGRALDILFNIVLAAVVVWAAWSIYSYVRATLGW 369

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            DV+  +  GCIT  RV+VLI IAS+IW+PVG++IG RP ++ +IQP AQ LAAFPANV 
Sbjct: 370 SDVVQAVTDGCITFVRVMVLIAIASLIWVPVGVYIGLRPKLAERIQPLAQFLAAFPANVL 429

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP VV  +  + L+PN+WLS L+I GTQWYILFNVIAGAS FP D  E +  + + GW W
Sbjct: 430 FPFVVMGIVAWKLDPNIWLSPLIILGTQWYILFNVIAGASVFPRDLGEASELYRLKGWLW 489

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR ++LP I PYYVTGA+TA GG+WNASIV+E  SWG   +   GLGAYIA++T  G F 
Sbjct: 490 WRKVMLPSILPYYVTGALTASGGSWNASIVAEAVSWGDTKVEAQGLGAYIADATAAGDFH 549

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            VVLGV +M  FV+ALNR LW  LY Y  R LR+
Sbjct: 550 RVVLGVGVMSVFVVALNRVLWRRLYAYADRRLRI 583


>gi|294637815|ref|ZP_06716088.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685]
 gi|291089055|gb|EFE21616.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685]
          Length = 578

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 291/570 (51%), Positives = 396/570 (69%), Gaps = 9/570 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++AF L+I +I ++  G  +T  P   ++   I+L   +LP+YA RTTLRML AM
Sbjct: 16  PNRWDVVAFPLIISLIAMMAIGFHQTLQPLASLEKQSISLAPAALPEYALRTTLRMLVAM 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL
Sbjct: 76  LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFVALFPGRVLGVEL 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    +GWQ+FW L  PF+MPGL+WNM
Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPSDLDEVARGLHFTGWQRFWKLDAPFAMPGLIWNM 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE I VG T   LPGIG+Y+A AI ++DL AI + +LTM+ VI  YD
Sbjct: 196 MMSMSGGWFFIVASEAITVGHTHFVLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILAYD 255

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR+E T    P  SW+  L R+T+            F+PL   +  L
Sbjct: 256 QLLFRPLVAWADKFRMETTRSATPPTSWLFNLLRRTHLFH-------RLFAPLGQLLGWL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R             L++ +  R+   +D  W   +  + + ++ +   Y+ +  +  +V
Sbjct: 309 ARLPLRCPRRR--PTLKVATPSRIGPTIDRLWGGAILLLTLYLSVRVGAYVQSGVSLHEV 366

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +V  LG IT+ RV +LI+I+S+IW+P+G+ IG RP +++KIQP AQ LAAFPAN+ FP+
Sbjct: 367 GHVFLLGLITLLRVSLLILISSLIWVPLGVLIGLRPALAAKIQPLAQFLAAFPANLLFPV 426

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  + ++ L+P++WLS L++ GTQWYILFNV+AG  +FPND++E A++FHI GW+WWR 
Sbjct: 427 FVIVIVHFRLDPDIWLSPLIVLGTQWYILFNVVAGTMSFPNDYREAAANFHIHGWQWWRQ 486

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP +FPYYVTGAITA GGAWNASIV+E   WG   L   GLGAYIAE+T  G+FP ++
Sbjct: 487 IMLPAVFPYYVTGAITAAGGAWNASIVAEYVQWGDTRLIAHGLGAYIAENTASGNFPHII 546

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           LG+ +M  FV   NR LW PLY Y     R
Sbjct: 547 LGIAMMALFVTLFNRLLWRPLYAYAETRFR 576


>gi|241761115|ref|ZP_04759204.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241374734|gb|EER64195.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 584

 Score =  544 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 303/579 (52%), Positives = 398/579 (68%), Gaps = 11/579 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++T     +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIKR---------- 304

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            LS     + + L +IRF   EN +   ++   S + D  W   V    +   W +  Y+
Sbjct: 305 -LSTPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWGGWVTFDYL 363

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LAA
Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLIMLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + + 
Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +T
Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|283856284|ref|YP_162306.2| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775280|gb|AAV89195.2| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 584

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 302/579 (52%), Positives = 397/579 (68%), Gaps = 11/579 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++      +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSASKEKVNSWVYDIIRHTRLIKR---------- 304

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            LS     + + L +IRF   EN +   ++   S + D  W   V    +   W +  Y+
Sbjct: 305 -LSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWGGWVTFDYL 363

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LAA
Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + + 
Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +T
Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|288961668|ref|YP_003451978.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
 gi|288913948|dbj|BAI75434.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
          Length = 586

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 297/576 (51%), Positives = 402/576 (69%), Gaps = 2/576 (0%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +    PN +D++A  LVIG++ +L  G  +  +P   ++ VPITLD   LP+YA R+TLR
Sbjct: 12  ATDATPNRWDVVALPLVIGLLALLAIGGHQMALPLGSIEEVPITLDPWMLPEYALRSTLR 71

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML+AM  SLLFTF YATLAAKSRR GM+L+P+LD++QS+P+LG+++FTVV+F++L+PG V
Sbjct: 72  MLAAMAASLLFTFTYATLAAKSRRAGMLLIPVLDVLQSVPVLGYISFTVVFFLSLFPGSV 131

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +GAE AAIFAIFTSQ WNM FS YQSL  +PRDL+E +  F  SGWQ+FW L  P++ PG
Sbjct: 132 LGAECAAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEAATGFGFSGWQRFWTLEAPYAAPG 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWNMMMSMSGGWFFVVASE I VGD  I LPGIGSY+A AI  Q L A+ +A+L ML V
Sbjct: 192 LVWNMMMSMSGGWFFVVASEAITVGDKTITLPGIGSYLAKAIDGQRLDAVGWAVLAMLLV 251

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I  YDQLLFRP++ W++KFR+E T      +SW+L LF++T F R I     +    L  
Sbjct: 252 ILAYDQLLFRPLVAWADKFRVELTGAQEVPESWLLTLFQRTRFFRAIFAPFDSLLGRLIW 311

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
              +L               +    ++  +  +D+ W+ ++    +   W  + +I +  
Sbjct: 312 L--RLPTGGLGRGAAGGLRSVGGLLDRVPARAVDMGWYLLLAVTGLWAGWSMVVFIASGV 369

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + DV  V+ LG  T+ RV+VLI +A+++W+P+G+ IG RP ++ K+QP AQ LAAFPAN
Sbjct: 370 AWGDVGTVLLLGGATLLRVLVLIALATLVWVPLGVLIGLRPRLAEKVQPVAQFLAAFPAN 429

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + FP+ V  +  + LNP++WLS LMI GTQWYILFNV+AGA+AFP+D KE A++F I GW
Sbjct: 430 LLFPVAVVVIVRFDLNPDIWLSPLMILGTQWYILFNVVAGATAFPSDLKEAAANFRIRGW 489

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WWR ++LPG+FPYYVTGA+TA GG+WNASIV+E  +WG   L   GLG+YIA++T  G 
Sbjct: 490 QWWRDVMLPGVFPYYVTGAVTASGGSWNASIVAEAVNWGDTQLTAHGLGSYIAQATTAGD 549

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P +VLG+ +M  FV+  NR LW PLY +  R LRL
Sbjct: 550 YPRIVLGIAVMSLFVILFNRLLWRPLYAFAERRLRL 585


>gi|260752921|ref|YP_003225814.1| binding-protein-dependent transporters inner membrane component
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258552284|gb|ACV75230.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 584

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 303/579 (52%), Positives = 398/579 (68%), Gaps = 11/579 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F    I PNI+DL+AF L+ G I +++HG  + +    +++  PI+L +  LP+YA R
Sbjct: 15  PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+
Sbjct: 75  TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L  PF
Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++  AI  A+L 
Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M+ +I LY+QLLFRP++ W+ KF++E++T     +SWV  + R T  ++           
Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIKR---------- 304

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            LS     + + L +IRF   EN +   ++   S + D  W   V    +   W +  Y+
Sbjct: 305 -LSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGLCVLSAILWGGWVTFDYL 363

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               ++QDV      G +T+ RV VLI++AS++W+PVGIWIG RP ++  IQP AQ LAA
Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPANV FP VV  +     NPN+WLS LMI GTQWYILFNVIAGA++FP D KE  + + 
Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I  W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+  L   GLGAYIA +T
Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             G    VVLG+++M  FV   NR LW PLY +  R +R
Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582


>gi|269140443|ref|YP_003297144.1| binding-protein-dependent transport system inner membrane component
           [Edwardsiella tarda EIB202]
 gi|267986104|gb|ACY85933.1| binding-protein-dependent transport system inner membrane component
           [Edwardsiella tarda EIB202]
 gi|304560235|gb|ADM42899.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Edwardsiella tarda FL6-60]
          Length = 579

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 294/585 (50%), Positives = 399/585 (68%), Gaps = 12/585 (2%)

Query: 5   NILPPFISRRIF--PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +I PP     +   PN +D++AF L+I +I ++  G  +   P   ++   I+L   +LP
Sbjct: 2   DIRPPGSHGPLSLNPNRWDIVAFPLIISLIAMMAIGFHQALQPLASLEKQTISLAPSALP 61

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            YA RTTLRML AM+ SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +
Sbjct: 62  DYALRTTLRMLVAMLASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTF 121

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+ L+PG+V+G ELAAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    + WQ+FW 
Sbjct: 122 FIALFPGRVLGVELAAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTSWQRFWK 181

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L VPF+MPGL+WNMMMSMSGGWFF+VASE I VG+T   LPGIG+Y+A AI ++DL AI 
Sbjct: 182 LDVPFAMPGLIWNMMMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIG 241

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           + +LTM+ VI +YDQLLFRP++ W++KFR+E T    P  SW+L L              
Sbjct: 242 WVLLTMVAVILIYDQLLFRPLVAWADKFRMENTRTANPPTSWLLNLL-------RRTRLF 294

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAW 361
               +PL + +  L R    +R+  P  +    +   R S  LD+ W   V  + + +  
Sbjct: 295 HRLLAPLGHLLGWLARL--PLRWPGPARYRPAPTTPGRSSRYLDLLWGAAVLVLTLYLCT 352

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           + + Y+ +  +  +V YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP 
Sbjct: 353 RVVLYVRSGVSLHEVGYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPL 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ LAAFPAN+ FP  V  + ++ LNP++WLS L++ GTQWYILFNV+AG   FPND++E
Sbjct: 413 AQFLAAFPANLLFPAFVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYRE 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           V ++ HI GW+WWR I+LP IFPYYVTGA+TA GGAWNASIV+E   WG   +   GLGA
Sbjct: 473 VTANLHIRGWQWWRQIMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVAAHGLGA 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           YIAE+T  G+FP+++LG+ IM  FV   NR LW PLY Y     R
Sbjct: 533 YIAENTASGNFPKIILGIAIMSLFVTLFNRLLWRPLYAYAESRFR 577


>gi|34499738|ref|NP_903953.1| nitrate ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34105589|gb|AAQ61943.1| probable ABC transporter nitrate permease [Chromobacterium
           violaceum ATCC 12472]
          Length = 564

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 309/573 (53%), Positives = 410/573 (71%), Gaps = 10/573 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN +DL+AF L++G + +   GI+ET  P   +   PI+L+  +LP+YA RTTLRML+
Sbjct: 1   MIPNRWDLIAFPLILGFLLMATTGIRETWAPITALQTAPISLEPGNLPEYALRTTLRMLA 60

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM  SL FT VY TLAAKSRR G++LVPILDI+QS+P+LG+++FTV +F+ L+PG+V+GA
Sbjct: 61  AMAASLAFTLVYGTLAAKSRRAGLLLVPILDILQSVPVLGYISFTVTFFLALFPGRVLGA 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNMTFS YQSL  +PRDL+EVS + RL+ WQKFW L VP++MPG++W
Sbjct: 121 EFAAIFAIFTSQAWNMTFSFYQSLRTVPRDLQEVSVNLRLTAWQKFWKLEVPYAMPGMIW 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFFVVASE I VGD  + LPG+GSY+ALAI+ +DL A+ + +LTM  VI +
Sbjct: 181 NMMMSMSGGWFFVVASEAITVGDKTVMLPGVGSYLALAIQHKDLAAVGWVILTMSVVILI 240

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQ LFRP++ W++KFRLE T      +SWVL L ++T F++           P    +K
Sbjct: 241 YDQFLFRPLVAWADKFRLEDTASQNAPESWVLNLIQRTRFIQ-------QLLKPFGKLLK 293

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
              R    I        L   ++  VS  +D+ W+ +V  +A+  A + + +I       
Sbjct: 294 TAARLRLNISL---PKGLHSEAHTPVSRGIDVLWWALVGLIAVAAASKLVHFIATEVGAW 350

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +VL V  LG +T+ RV +LI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+ F
Sbjct: 351 EVLKVFGLGLVTLVRVSLLIAIASLIWVPLGVLIGLRPALAEKVQPLAQFLAAFPANLLF 410

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ V  +++Y LNP++WLS L++ GTQWYILFNVIAGA+AFPNDFKE A++F I GW+WW
Sbjct: 411 PVFVIVIAHYKLNPDIWLSPLIVLGTQWYILFNVIAGATAFPNDFKEAAANFRIRGWQWW 470

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LPGIFPYYVTGAITA GGAWNASIVSE  SWG   L   GLGAYIA++T  G +P+
Sbjct: 471 RKVMLPGIFPYYVTGAITASGGAWNASIVSEFVSWGDDKLAAHGLGAYIAQTTAAGDYPK 530

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++LG+ +M  FV+  NR LW P+Y      LRL
Sbjct: 531 ILLGIAVMSLFVVLFNRLLWRPMYAIAENKLRL 563


>gi|188591808|ref|YP_001796407.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis]
 gi|170939203|emb|CAP64246.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 578

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 309/579 (53%), Positives = 407/579 (70%), Gaps = 11/579 (1%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +RR+ PN +D +A  L+IG++ +   GI+ET  P        I+LD   LP+YA RT
Sbjct: 10  PGTARRLLPNRWDFIALPLIIGLLVVAASGIRETLAPLAGPSAEAISLDPAMLPEYALRT 69

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TLRML+A+  SLLFTF Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTVV+F+ L+P
Sbjct: 70  TLRMLAALAASLLFTFTYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVVFFLALFP 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+++GAELAAIFAIFTSQ WNMTFS YQSL  +P DL EVS S RL+ WQKFW L VPF+
Sbjct: 130 GRMLGAELAAIFAIFTSQAWNMTFSFYQSLRTLPPDLIEVSNSMRLTPWQKFWKLEVPFA 189

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MPGL+WNMMMSMSGGWFFVVASE I VGD  I LPG+G+++A AI + ++ A+ + +L M
Sbjct: 190 MPGLIWNMMMSMSGGWFFVVASEAITVGDKSITLPGVGAFLATAIADSNMAAVGWVILAM 249

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           + VI LYDQ LFRPM+ W+++FRLE T+      SWVL L  +T+ ++            
Sbjct: 250 IAVIVLYDQFLFRPMVAWADRFRLESTSAQTAPQSWVLNLVHRTHLIQ-----------S 298

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L     +L R L   RF              ++ ++D+ W  +V  +A  + W+++ Y+ 
Sbjct: 299 LLRTFGRLLRKLARARFAVQLPAASGPQRAGLARVVDVVWSLLVAVLAGYLLWRTVSYVH 358

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 +V+ VI LG +T+ RV+VLI++ S+IW+PVG+ IG RP ++ KIQP AQ LAAF
Sbjct: 359 TEAGLDEVVKVIGLGLLTLLRVLVLIVLTSLIWVPVGVMIGLRPRLAEKIQPLAQFLAAF 418

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+ FP+ V  + ++HLNP++WLS L++ G QWYILFNVIAGA+AFPNDF+E A++F I
Sbjct: 419 PANLLFPVFVFGIVHFHLNPDIWLSPLIVLGVQWYILFNVIAGATAFPNDFREAATNFRI 478

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            GW+WWR I+LPGIFPYYVTGAITA GGAWNASIVSE  SWG   L   GLGAYIA+ST 
Sbjct: 479 RGWQWWRQIMLPGIFPYYVTGAITASGGAWNASIVSEAVSWGSTSLSAHGLGAYIAQSTA 538

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G +P++VLG+ +M   V+  NRFLW PLY      LR+
Sbjct: 539 AGDYPKIVLGIAVMSIMVVCFNRFLWRPLYAIAESKLRM 577


>gi|158424701|ref|YP_001525993.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans
           ORS 571]
 gi|158331590|dbj|BAF89075.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans
           ORS 571]
          Length = 582

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 311/582 (53%), Positives = 408/582 (70%), Gaps = 11/582 (1%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           +      RR F   FDL AF+LV G+  +   G Q+T +P   ++  PI+L    LP+YA
Sbjct: 11  VTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYA 70

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            RTTLRML+A+V SL+FTF+Y  LAAKSRR  MVL+P+LDI+QS+P+LGFL+FTV++FMN
Sbjct: 71  LRTTLRMLAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMN 130

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+PGKVIG E+AA+FAIFTSQ WNMTFS YQSL  +PRDL EVSR FRL+GWQ+FW L V
Sbjct: 131 LFPGKVIGVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLTGWQRFWRLEV 190

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PFSMPGLVWN MMSMSGGWFFVVASE I VG+T I LPGIG+Y++ AI E++L A+ +++
Sbjct: 191 PFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAERNLTAVAWSV 250

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
             ML +I +YDQLLFRP++ W+++FR E++ G  P  SWVL + ++ +  R         
Sbjct: 251 GAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRL-------- 302

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              L + V  L R L  +    P       +    S  +D  W  +V  +A+   W  + 
Sbjct: 303 ---LLSPVGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVS 359

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++       +V +V WLG +T+ RV VLI +AS+IW+PVG+WIG RP +++ +QP AQ L
Sbjct: 360 FVATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFL 419

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AAFPAN+ FP  V  +    L+PN+WLS LM+ GTQWYILFNVIAGASAFPND KE ASS
Sbjct: 420 AAFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASS 479

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           FH+ G +WW  +ILPG+FPYYVTGA+TA GG+WNASIV+EVASWG   LR  GLG+YIA+
Sbjct: 480 FHLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIAD 539

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +T    +P + LG+ +M  +V+A NR LW PL+ +  + LRL
Sbjct: 540 ATTAADYPRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRL 581


>gi|238921314|ref|YP_002934829.1| nitrate/sulfonate/bicarbonate ABC transporter [Edwardsiella
           ictaluri 93-146]
 gi|238870883|gb|ACR70594.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Edwardsiella ictaluri 93-146]
          Length = 578

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 290/570 (50%), Positives = 391/570 (68%), Gaps = 9/570 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D++AF L+I +I ++  G  +   P   +    I+L   +LP YA RTTLRML AM
Sbjct: 16  PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLGKQSISLAPDALPDYALRTTLRMLLAM 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + SLLFT +Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL
Sbjct: 76  LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQSL  +P DL+EV+R    +GWQ+FW L VPF+MPGL+WNM
Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTGWQRFWKLDVPFAMPGLIWNM 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE I VG+T   LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD
Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+++FR+E T    P  SW+L L                 F+PL   +  L
Sbjct: 256 QLLFRPLVAWADRFRMENTRTANPPTSWLLNLL-------RRTRLFHRLFTPLGQLLGWL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R    +R+     +    +  R    LD+ W   +  + + +  + I Y+ +  +  +V
Sbjct: 309 ARL--PLRWPGQPRYRPAPAPGRSQRYLDLLWSAAILLLTLYLCTRVILYVHSGVSLHEV 366

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP 
Sbjct: 367 GYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFPA 426

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  + ++ LNP++WLS L++ GTQWYILFNV+AG   FPND++EV ++ HI GW+WWR 
Sbjct: 427 FVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWRQ 486

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP IFPYYVTGA+TA GGAWNASIV+E   WG   +   GLGAYIAE+T  G+FP ++
Sbjct: 487 IMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVVAHGLGAYIAENTASGNFPNII 546

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           LG+ IM  FV   NR LW PLY Y     R
Sbjct: 547 LGIAIMSLFVTLFNRLLWRPLYAYAESRFR 576


>gi|154245217|ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159302|gb|ABS66518.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 582

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 318/581 (54%), Positives = 411/581 (70%), Gaps = 7/581 (1%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           L     R   PN++D LAF L+ G + +++HG +ET  P   +D+ P++LD   LP+YA 
Sbjct: 8   LEAGRRRTFAPNLWDALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYAL 67

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RTT+RML+A+V SL+FTF Y  LAAKSRR  MVLVP+LDI+QS+P+LGFL+FTVV FM+L
Sbjct: 68  RTTMRMLAAIVASLVFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSL 127

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +PG+V+G ELAAIFAIFTSQ WNMTFS YQSL  +PRDL+E +RSFRLSGWQ+FW L VP
Sbjct: 128 FPGRVLGVELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           FSMPGLVWN MMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAIKEQ+L A+ +A+L
Sbjct: 188 FSMPGLVWNTMMSMSGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVL 247

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ML VI LYDQLLFRP++ W++KFR+E +       SW+L   R+T   + +        
Sbjct: 248 AMLAVILLYDQLLFRPLVAWADKFRVETSASGAAPRSWLLSAARRTYLFQRV-------L 300

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            PL   +  + R          ++  ++  +   S   +  W  +V  VA    +  + +
Sbjct: 301 QPLGAMLAAVPRQRLAFSAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAF 360

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T  +V  V  LG +TM RV+VLI +A++IW+P+G+WIG RP  + ++QP AQ LA
Sbjct: 361 VGTELTLPEVTQVFGLGVLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLA 420

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+ FP  V  +    L+P++WLS LM+ GTQWYILFNV+AGASAFPND KE AS+F
Sbjct: 421 AFPANIIFPFAVVAIVRLGLDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLKEAASTF 480

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            I GW WWR ++LPGIFPYYVTGAITA GG+WNASIV+EVASWG   LR  G+GAYIA++
Sbjct: 481 RIRGWNWWRKVMLPGIFPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADA 540

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           T  G +P +VLGV +M  FV+  NR LW P++ +  R LRL
Sbjct: 541 TAAGDYPRIVLGVAVMSIFVIFFNRLLWRPMFTFAGRRLRL 581


>gi|197116829|ref|YP_002137256.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197086189|gb|ACH37460.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 578

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 283/574 (49%), Positives = 384/574 (66%), Gaps = 10/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  PN +DL AF++V+G++ +   G +E  +P    + +P++LD  +LP+YA RT LRM 
Sbjct: 14  RAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMA 73

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SLLFTF Y TLAAKSRR   +LVP+L+I+QS+PILGFL+ TV  F+ ++PGK++G
Sbjct: 74  AALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLG 133

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E AAIFAIFTSQ WNM FS YQSL  IP DL E S  F LS WQ+FW L  PF+MP L+
Sbjct: 134 VECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLI 193

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMS+SGGWFFVVASE I VG T + LPGIGSY+A AI  + L AI +A+LTML VI 
Sbjct: 194 WNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSAIGWALLTMLLVIL 253

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           +YDQLLFRPM+ W++KF+ E T     + SWVL LF++   LR  G    N +  L++ +
Sbjct: 254 VYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLL 313

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                 +  +   +    +I W  ++     G AW  + ++      
Sbjct: 314 PR----------RKQRASFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDG 363

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++  V +LG +T+ RV VL+IIAS+IW+P+G++IG  P  ++++QP AQ LAAFPAN+F
Sbjct: 364 AEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPANLF 423

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+ V  + +YHL+P +W + LMI GTQWYILFNVI GASA P D +E A +F ++GW+ 
Sbjct: 424 FPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSGWKL 483

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W+ ++LPGIFP  VTG +TA GG WNASIV+E+ +WG+  L  TGLG+YIA  TEKG +P
Sbjct: 484 WKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYP 543

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + LG+ +M  +VL LNRF W  L+       RL
Sbjct: 544 RIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRL 577


>gi|326314965|ref|YP_004232637.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371801|gb|ADX44070.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 578

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 265/569 (46%), Positives = 368/569 (64%), Gaps = 11/569 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D     LV+  + +L +G  +   P ++ D++P++LD   LP Y  RTTLRM  A+
Sbjct: 19  PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F  V+A LAAK R    VLVP+LDI+QSIPILGFL+ TV  F+ L+PG ++G E 
Sbjct: 79  GASLIFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQSL  +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM
Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPG+GSYIA+AI+ +DL AI +A+  ML  I LYD
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E  +      SW+L   R+    + +               ++L
Sbjct: 259 QLLFRPLVAWADKFRFEEGSSDAAPRSWLLDWLRRARATQTVA----------GWCQRQL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL + +       ++       +   +  W  V+    +    + + ++     + +V
Sbjct: 309 GRTLTLFKRSHDGTSIRARPPAPSARA-ERVWDAVLAAGVLFAIARLVQFVHTEVGWHEV 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++V  LG  T+ RV+VLI +A+++W+P+G+WIG  P  + ++Q  AQ LAAFPAN+FFP+
Sbjct: 368 VHVFTLGGYTLVRVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ +  A +  ++GW  W+ 
Sbjct: 428 AVMLVVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLKWKR 487

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +LP +FP +VTGAITA GG+WNASIV+E  +WG   L+  GLG+YIA+ T  G FP + 
Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTATGDFPRIA 547

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           LG+  M  FV+ LN FLW  LY      +
Sbjct: 548 LGIGAMVVFVMGLNHFLWRRLYRLAEDRM 576


>gi|222081809|ref|YP_002541174.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726488|gb|ACM29577.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 586

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 305/579 (52%), Positives = 397/579 (68%), Gaps = 11/579 (1%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
               RI PN +DL+AF  V  +  + +HG  E   P D +   PI+LD   LP+YA RTT
Sbjct: 17  LARTRILPNGYDLVAFAFVAALAVLAVHGAAEMRAPLDGLANAPISLDPARLPEYALRTT 76

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM +A+  SL+FTFV+ATLAAKSRR  M+++P LDI+QS+P+LGFLTFTV +FM ++PG
Sbjct: 77  LRMFAAIGASLVFTFVFATLAAKSRRAEMIIIPALDILQSVPVLGFLTFTVTFFMGIFPG 136

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +GAE A++FAIFTSQ WNM FS YQSL  +PRDL+EVSR F LS WQ+FW L  PFS 
Sbjct: 137 SQLGAECASVFAIFTSQAWNMAFSFYQSLRTVPRDLDEVSRGFGLSAWQRFWRLEAPFSA 196

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GS++A+AI +QD  A+ +A+L M 
Sbjct: 197 PGLIWNTMMSMSGGWFFVVASEAITVGNTTVQLPGLGSWLAVAIDKQDFAAVSWAVLAMG 256

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSP 308
            VI LYDQLLFRP++ W++KFR E+T G     SWV  L ++T  L+  +G  +W + S 
Sbjct: 257 VVIVLYDQLLFRPIVAWADKFRFEQTAGQEKPRSWVYSLIQRTRLLKCLMGPLAWAWGSL 316

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +   +  + R   V+R +          N   + MLD  WF ++ G+ I   W +  ++ 
Sbjct: 317 MLVRLPAMPRKAPVVRHN----------NAVATRMLDYAWFVLIAGIGIWGIWTAFAFVS 366

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              T+ D       G +T+ RV+VLI +AS+IW+P+G+WIG RP ++ ++QP AQ LAAF
Sbjct: 367 QTLTWSDAWEAFSGGLVTLLRVLVLIAVASVIWVPIGVWIGLRPAVAERVQPVAQFLAAF 426

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PANV FP  V  +     +PN+WLS LM+ GTQWYILFNVIAGASAFP D KE  S + +
Sbjct: 427 PANVLFPFAVIAIVATGASPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEACSVYQL 486

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W WWR  ILPGIFPYYVTGA+TA GG+WNASIV+EV SWGH  L   GLG+YIA++TE
Sbjct: 487 RSWTWWRRAILPGIFPYYVTGALTASGGSWNASIVAEVVSWGHTKLEAFGLGSYIAKATE 546

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G +  V+LG+ +M  FV  LNR LW PLY++  R LRL
Sbjct: 547 AGDYQRVILGIAVMSLFVTLLNRTLWRPLYVFAERRLRL 585


>gi|300689778|ref|YP_003750773.1| binding-protein-dependent transporter [Ralstonia solanacearum
           PSI07]
 gi|299076838|emb|CBJ49450.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum PSI07]
          Length = 586

 Score =  534 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 271/571 (47%), Positives = 369/571 (64%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL               S              ++  +A+  AW  + ++ +   + +V
Sbjct: 316 ERTLAWGAERTRPKAHTNNSGSPRLPWAGRVADVIILLIALAAAWHILQFVRSEVGWSEV 375

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 376 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +F + GW  W+ 
Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLRGWLKWKR 495

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 496 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 555

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 556 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586


>gi|120608820|ref|YP_968498.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120587284|gb|ABM30724.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 578

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 264/569 (46%), Positives = 366/569 (64%), Gaps = 11/569 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +D     LV+  + +L +G  +   P ++ D++P++LD   LP Y  RTTLRM  A+
Sbjct: 19  PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F  V+A LAAK R    VLVP+LDI+QSIPILGFL+ TV  F+ L+PG ++G E 
Sbjct: 79  GASLVFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQSL  +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM
Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPG+GSYIALAI+ +DL  I +A+  ML  I LYD
Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E  +      SW+L   R+    + +               ++L
Sbjct: 259 QLLFRPLVAWADKFRFEEGSADAAPRSWLLDWLRRARATQTVA----------GWCQRQL 308

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL + R       ++       +   +  W  V+    +    + + ++     + +V
Sbjct: 309 GRTLTLFRRSHDGTSIRARPPAPSARA-ERVWDAVLAAGVLFAIARLVQFVHTEVGWHEV 367

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++V  LG  T+ RV+VLI +A+++W+P+G+WIG  P  + ++Q  AQ LAAFPAN+FFP+
Sbjct: 368 VHVFTLGGYTLARVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ +  A +  ++GW  W+ 
Sbjct: 428 AVMLAVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLQWKR 487

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +LP +FP +VTGAITA GG+WNASIV+E  +WG   L+  GLG+YIA+ T  G FP + 
Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTAAGDFPRIA 547

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           LG+  M  FV+ LN F+W  LY      +
Sbjct: 548 LGIGAMVVFVMGLNHFVWRRLYRLAEDRM 576


>gi|237801737|ref|ZP_04590198.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024596|gb|EGI04652.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 584

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 289/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             D +  VL+   + +LL+G  +   P D++   P++LD   LP+YA RTTLRM  A+  
Sbjct: 26  WADGVCLVLLAVFVGLLLYGAGQMLQPIDVLTSSPVSLDPARLPEYAWRTTLRMFIALAA 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 86  SLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMM
Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L+AI +A+  M  VI  YDQL
Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLMAIAWAVGAMALVILAYDQL 265

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SW+  L R++                L   +    +
Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLRRSRLAPM-----------LGALLAAPWK 314

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L +I +    N  ++     VS ++D  W  +V    +        +I       D+  
Sbjct: 315 GLMLIDWRVLSNVWKVRPTPAVSRLIDYLWLGLVMAGCLAGGTYLFRFIEASLGLSDMAT 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              LG  TM RV+VLIIIAS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V
Sbjct: 375 AFGLGLATMLRVIVLIIIASLIWVPIGVWIGLRPVWAERLQPVAQFMAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             ++  HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + 
Sbjct: 435 IAIAGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG
Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++M  FV+A NR LW PLY +  R L L
Sbjct: 555 IVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|17548088|ref|NP_521490.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430395|emb|CAD16868.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 586

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 269/571 (47%), Positives = 368/571 (64%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL               ++             ++   A+   W  + ++ +   + +V
Sbjct: 316 ERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEV 375

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 376 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +F + GW  W+ 
Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLRGWLKWKR 495

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 496 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 555

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 556 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586


>gi|148258639|ref|YP_001243224.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410812|gb|ABQ39318.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 585

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 289/578 (50%), Positives = 383/578 (66%), Gaps = 11/578 (1%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
               R   P+  DL A  L++ I  +++ G+ +   P   ++  P+ L +  LP+YA  +
Sbjct: 17  SLAPRLAGPSWADLAAIALLLVIALLVIVGVGQMRQPLTALNAAPVDLQLLHLPEYALLS 76

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TLRM  A+  SL+FT   ATLAAKSR+  +++VP LDI+QS+P+LGFLTFTV++FMNL+P
Sbjct: 77  TLRMFGALAASLIFTLTVATLAAKSRKAELIIVPALDILQSVPVLGFLTFTVMFFMNLFP 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+ +G E AAIFAIFTSQ WNM FS YQSL  +P+DL+EVSR F  S W++F  L +PF+
Sbjct: 137 GRQLGVECAAIFAIFTSQAWNMAFSFYQSLRTVPKDLDEVSRQFGFSSWRRFVRLELPFA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MPGLVWN MMSMSGGWFFVVASE I VG+T I LPGIGS++ALAI+ +D  A+ +A+  M
Sbjct: 197 MPGLVWNAMMSMSGGWFFVVASEAIAVGNTTIALPGIGSWLALAIERKDFGAVAWAVFAM 256

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
             VI LYDQL+FRP++ W++KFR E+T       SWV  L R+T  L             
Sbjct: 257 AVVIVLYDQLIFRPIVAWADKFRFEQTASRERPRSWVYDLARRTRLLP-----------S 305

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +   +    R L  + +  P     L  N+ +  + D  W   +  V  G +   + +I 
Sbjct: 306 IIELLLVAGRALSALSWSAPPRRQTLHPNKHIIRVPDGLWIGFIAVVCFGASLWLLRFIS 365

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              T  D++ ++ LG  T+ RV VLI IASIIW+P+G+WIG RP  S ++QP AQ LAAF
Sbjct: 366 TSLTAADIISIVGLGFATLVRVAVLIAIASIIWVPIGVWIGLRPTWSERLQPVAQFLAAF 425

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PANV FP  V  +    L+PN+WLS LMI GTQWYILFNVIAGASA PND +E A +F++
Sbjct: 426 PANVLFPFAVVIIIGLRLDPNIWLSPLMILGTQWYILFNVIAGASALPNDLREAARTFNM 485

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G +WWR + LPGIFPY+VTGA+TA GG+WNASIV+E  SWG   L+ TGLG++IA++T 
Sbjct: 486 RGLQWWRQVALPGIFPYFVTGALTASGGSWNASIVAESVSWGDKRLQATGLGSFIADATA 545

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            G  P V +G+++M  FV+ LNR LW PLY Y  R LR
Sbjct: 546 AGDLPRVAVGIVVMSAFVVTLNRTLWRPLYRYAERRLR 583


>gi|285018221|ref|YP_003375932.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283473439|emb|CBA15944.1| putative abc transporter transmembrane permease protein
           [Xanthomonas albilineans]
          Length = 584

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 292/572 (51%), Positives = 380/572 (66%), Gaps = 9/572 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + PN+ DL  F L++G+  +LLHG  +   P        ++LD+  LP+Y  RTTLRM +
Sbjct: 20  VLPNLHDLTVFALLLGLGVLLLHGAADMRAPLPPPGTTSVSLDLWQLPEYGLRTTLRMFA 79

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           AM  SLLFTFV ATLAAKSRR   V+VP LDI+QS+P+LGFLTFTV +F+ L+PG+ IGA
Sbjct: 80  AMAASLLFTFVVATLAAKSRRAERVIVPALDILQSVPVLGFLTFTVTFFLGLFPGRQIGA 139

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ELA+IFAIFTSQ WNM FS YQSL N+PRDL+EV+R F +S WQ+FW L  P++ P L+W
Sbjct: 140 ELASIFAIFTSQAWNMAFSFYQSLRNVPRDLDEVARGFGMSAWQRFWRLEAPYATPSLIW 199

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFFVVASE I VGD  + LPGIG+Y+ALAI +++  A+ +A+L M  +I L
Sbjct: 200 NMMMSMSGGWFFVVASEAITVGDHTLELPGIGAYLALAIGQRNFGAVAWAVLAMAVLIAL 259

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQLLFRP++ WS+KFR E T       SW+  L R+T  ++ +       +   +  ++
Sbjct: 260 YDQLLFRPIVAWSDKFRAELTASQNKPQSWLYDLLRRTRLVKRLAAPLSWAWQR-TLLLR 318

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
              R   V             S  R +   D FW   +    +  AW +  Y   H +  
Sbjct: 319 WAPRRASV--------STAEASLGRGAVWGDRFWSVSLAAAGLTAAWFAFDYGRRHLSLH 370

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+      G  T+ RVVVLI +AS++W+P+G+WIG RP ++ ++QP AQ LAAFPANV F
Sbjct: 371 DLGDAFCGGLATLLRVVVLIALASLVWVPIGVWIGLRPKVAQRVQPLAQFLAAFPANVLF 430

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P  V  +     NPN+WLS LMI GTQWYILFNVIAGASAFP D +E A+ + +  W WW
Sbjct: 431 PFAVLAIVATGANPNIWLSPLMILGTQWYILFNVIAGASAFPTDLREAATIYRLRSWTWW 490

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +ILPGIFPYYVTGA+TA GG+WNASIV+E+ASWG  H++  GLG+YIA +T  G    
Sbjct: 491 RRVILPGIFPYYVTGALTASGGSWNASIVAELASWGDRHVQAYGLGSYIARATAAGDGAR 550

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           V+LGV +M  FV   NR +W  LY++  R LR
Sbjct: 551 VLLGVAVMSLFVSIFNRAVWRRLYVFAERRLR 582


>gi|307130273|ref|YP_003882289.1| ABC transporter nitrate permease [Dickeya dadantii 3937]
 gi|306527802|gb|ADM97732.1| ABC transporter nitrate permease [Dickeya dadantii 3937]
          Length = 593

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 295/569 (51%), Positives = 388/569 (68%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             D+L F L+  +  ++++G+++ ++P  I+D  P+ LD+  LP+YA RTTLRM  A+ +
Sbjct: 35  RADMLFFTLLALLAALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALGV 94

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SLLFT V ATLAAKSR+  MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 95  SLLFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 154

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WNM FS +QSL  +P DL EVS+ F  S W++F  L +PF+ PGLVWNMMM
Sbjct: 155 IFAIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFATPGLVWNMMM 214

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M  VI LYDQL
Sbjct: 215 SMSGGWFFVVASEAITVGNTTVNLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQL 274

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SWV  L R+T+    I           +N +     
Sbjct: 275 LFRPVVAWADKFRFEQTASQKRPRSWVYDLIRRTHISTAI-----------ANVLGWPLH 323

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L  +R+    +FL+     R S + D  W  +V    +    Q + YI       DV+ 
Sbjct: 324 ALAALRWPRLPSFLRHTPGPRYSKVTDRLWLALVIIGVLAGVVQLVQYIGASLGMADVIA 383

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V  +G  T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP  V
Sbjct: 384 VFSMGLATLARVVVLIALASVIWLPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAV 443

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             ++ ++LNP++WLS LM+ GTQWYILFNVIAGA+A P D  E A  + I  W+WWR + 
Sbjct: 444 ILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGAAALPTDLLEAARIYGIRRWQWWRQVA 503

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPGIFPYYVTGA+TA GG+WNASIVSE  SWG  HL  TGLGAYIA +T    FP V LG
Sbjct: 504 LPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFPRVALG 563

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + +M  FV+A NR LW PLY +  R LRL
Sbjct: 564 IAVMSVFVIAFNRLLWRPLYQFAERRLRL 592


>gi|289166596|ref|YP_003456734.1| ABC transporter, permease protein [Legionella longbeachae NSW150]
 gi|288859769|emb|CBJ13750.1| putative ABC transporter, permease protein [Legionella longbeachae
           NSW150]
          Length = 579

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 272/584 (46%), Positives = 362/584 (61%), Gaps = 12/584 (2%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             Y   P  + R I  N +DLL  +L+  I+  L     +   P  + + +PI+LD  +L
Sbjct: 5   RFYFANPDRVGRYI--NRWDLLLLILIFSILFFLGWAGSQMATPYQLGEQIPISLDPSNL 62

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P YA RT LRM  A+  S++FTF     AAK+RR   +++P +DI+QSIP+L FL+ TV 
Sbjct: 63  PFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSFLSITVT 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F++L+P  ++G E A+IFAIF +QVWNMTF  YQS+  +P DL+EV+  FRLS WQ+FW
Sbjct: 123 GFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFW 182

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L VPFSM  L+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI+++DL A+
Sbjct: 183 KLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAV 242

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E +       SW++   R +  ++     
Sbjct: 243 GYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEYQSWLVDWMRGSRLMKQFAEI 302

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
              F     N                 E+      + +    LD FW   V       AW
Sbjct: 303 IGVFTDHFVN----------ARWMRLNESKAVKEIDLKKQRRLDRFWGAFVFLCVCSGAW 352

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+      D+++V  LG  T  RV+ LII++S+IWIPVG+WIG RP I+ KIQP 
Sbjct: 353 FLLRFILAELKISDIVHVFLLGAATGTRVICLIILSSLIWIPVGVWIGMRPRIAQKIQPV 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q +AAFPAN+F+PL V  +  +HLN  +W++ LMI GTQWYILFNVIAGASA P +   
Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTPLMILGTQWYILFNVIAGASAIPRELYL 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F + GW WW+ + +PGIFP+Y+TGAITA GGAWNASIV+E  SWG+  LR TGLG 
Sbjct: 473 AADNFGLKGWLWWKRLAVPGIFPFYITGAITAAGGAWNASIVAEFVSWGNTTLRATGLGE 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           YI  ST  G FP++ LG  +MC +VLA N  +W PLY       
Sbjct: 533 YIQASTATGDFPKIALGTAMMCLYVLAFNHLIWRPLYRLAEERF 576


>gi|271499902|ref|YP_003332927.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270343457|gb|ACZ76222.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 584

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 295/586 (50%), Positives = 395/586 (67%), Gaps = 12/586 (2%)

Query: 3   LYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           + +       +R  P+   D+L F L+  ++ ++++G+++ ++P  I+D  P+ LD+  L
Sbjct: 9   MTDNRALLTRQRATPSYRADILFFTLLALVVALVVYGMEQMSLPLSILDASPVRLDIALL 68

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P+YA RTTLRM  A+ +SLLFT V ATLAAKSR+  MV++P LDI+QS+P+LGFLTFTV 
Sbjct: 69  PEYALRTTLRMFVALAVSLLFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVT 128

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +FM L+PG+ +G E AAIFAIFTSQ WNM FS +QSL  +P DL EVS+ F  S W++F 
Sbjct: 129 FFMGLFPGRQMGVECAAIFAIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFI 188

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +PF++PGLVWNMMMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI
Sbjct: 189 RLELPFAIPGLVWNMMMSMSGGWFFVVASEAITVGNTTVSLPGIGSWLALAIAQENLTAI 248

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            +A++ M  VI LYDQLLFRP++ W++KFR E+T       SWV  L R+T+    I   
Sbjct: 249 AWAVVAMTVVIVLYDQLLFRPVVAWADKFRFEQTASQKRPRSWVYDLVRRTHISTAI--- 305

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
                    N +     TL  +R+     FL+   + R + + D  W  +V    +    
Sbjct: 306 --------INVLSWPFYTLAALRWPSVPRFLRHTPSPRYNKITDRLWLALVIIGVLAGVV 357

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q + YI       DV+ V  +G  T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP 
Sbjct: 358 QLVQYIGASLGMADVIAVFGMGLATLARVVVLIALASVIWVPIGVWIGLQPSVAERLQPL 417

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           AQ LAAFPANV FP  V  ++ ++LNP++WLS LM+ GTQWYILFNVIAG +A P D  E
Sbjct: 418 AQFLAAFPANVLFPFAVILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGTAALPTDLLE 477

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A  + I  W+WWR + LPGIFPYYVTGA+TA GG+WNASIVSE  SWG  HL  TGLGA
Sbjct: 478 AARIYGIRRWQWWRQVALPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGA 537

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           YIA +T    F +V LG+ +M  FV+A NR LW PLY +  R LRL
Sbjct: 538 YIANATTAADFHQVALGIAVMSVFVIAFNRLLWRPLYQFAERRLRL 583


>gi|289625535|ref|ZP_06458489.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649788|ref|ZP_06481131.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330870904|gb|EGH05613.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 584

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 285/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V  +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMGRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|299065148|emb|CBJ36312.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum CMR15]
          Length = 585

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 269/571 (47%), Positives = 369/571 (64%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL                  R+ +   +    ++   A+   W  + ++ +   + +V
Sbjct: 316 ERTLAWGAERTRPKASGSNGFVRLPWAGRVA-DVIILLAALAAVWHILQFVRSEVGWGEV 374

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+WLG +TM RV+VLI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 375 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 434

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + +  A +  + GW  W+ 
Sbjct: 435 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNLGLRGWLKWKR 494

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 495 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 554

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 555 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 585


>gi|71734937|ref|YP_277251.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555490|gb|AAZ34701.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 584

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 285/571 (49%), Positives = 380/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  + LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|289677501|ref|ZP_06498391.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330898685|gb|EGH30104.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 584

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 284/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   L+   I + ++G  +   P  +++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLALLTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGSV-----------LAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I +       ++     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYVWLGLVMAACLAGSVYLFRFIEASLGASDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330937353|gb|EGH41350.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 584

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 283/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I +       ++     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|302188283|ref|ZP_07264956.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 584

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 282/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G  +   P  +++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++                L++ +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LASVLAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I +       ++     ++ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGIARVLDYVWLGLVMAACLAGSVYLFRFIEASLGTSDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|320321792|gb|EFW77890.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331540|gb|EFW87480.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 584

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 284/571 (49%), Positives = 379/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +P ++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPLAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  + LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330976362|gb|EGH76419.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 584

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 283/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGSV-----------LAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I +       ++     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM  GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMGLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330952378|gb|EGH52638.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 584

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 282/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G+ +   P  +++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  +  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I +       ++     V  +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVVRVLDYAWLGLVMAACLAGSVYLFRFIEASLGVSDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|257485651|ref|ZP_05639692.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 584

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 283/571 (49%), Positives = 380/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           Q+LFRP++ W++KFR E+T       SW+  +  ++     +G             +   
Sbjct: 264 QVLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  + LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRC 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330961443|gb|EGH61703.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 584

 Score =  524 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 286/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I D +  V++   I +L +G+ +   P  ++D  P+TLD   LP+YA RTTLRM  A+  
Sbjct: 26  IADGICVVILAVFIALLWYGVGQMLQPLAVLDSSPVTLDPARLPEYALRTTLRMFIALAA 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FTF+ ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 86  SLIFTFIVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMM
Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPNDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVA E I VGDT + LPGIGS++ALA+++++L AI +A+  M  VI  YDQL
Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAVEQKNLPAIGWAVGAMALVILAYDQL 265

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SWV  +  ++     +G                  +
Sbjct: 266 LFRPVVAWADKFRFEQTASSKRPRSWVYSVLGRSRLAPLLGALLA-----------APWK 314

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L +I +     F ++    RV+ ++D  W  +V    +  +     +I       D++ 
Sbjct: 315 GLMLIDWRVVSRFWKVKPTPRVARLIDYLWLGMVMAACLTASLYLFRFIEASLGLSDMIT 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              LG  TM RV+VLI++AS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP  V
Sbjct: 375 AFGLGLATMLRVIVLIMVASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + 
Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG
Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIASATQAGDFPRVTLG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           + +M  FV+A NR LW PLY +  R L L
Sbjct: 555 IAVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|213968477|ref|ZP_03396620.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301384946|ref|ZP_07233364.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062022|ref|ZP_07253563.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302134333|ref|ZP_07260323.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926765|gb|EEB60317.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 584

 Score =  524 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 283/569 (49%), Positives = 373/569 (65%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             D L   L+   + ++L G  +   P +++   P++LD   LP+YA RTTLRM  A+  
Sbjct: 26  WADGLCLALLALFVALVLFGASQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAA 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 86  SLIFTFVVATLAAKSRKAEHVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMM
Sbjct: 146 IFAIFTSQAWNLAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ 
Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQF 265

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SW+  L  ++                LS  +    +
Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWK 314

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L +I         ++     V  ++D  W  +V    +  +     +I       D++ 
Sbjct: 315 GLMLINGRGVSRLWKVKPTPGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVG 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              LG  TM RV+VLI IAS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V
Sbjct: 375 AFGLGLATMLRVIVLIAIASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + 
Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG
Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++M  FV+A NR LW PLY +  R L L
Sbjct: 555 IVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330970284|gb|EGH70350.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 584

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 280/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G+ +   P  +++  P++LD   LP+YA RTT+RM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  +  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGSV-----------LAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I         ++     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDGRVISRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI++AS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|66048315|ref|YP_238156.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63259022|gb|AAY40118.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 584

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 279/571 (48%), Positives = 376/571 (65%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +   ++   I + ++G+ +   P  +++  P++LD   LP+YA RTT+RM  A+
Sbjct: 24  PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++AL I++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALTIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  +  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGSV-----------LAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            + L +I         ++     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 WKCLMLIDGRVISRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI++AS+IW+PVGIWIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYY+TGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583


>gi|331011939|gb|EGH91995.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 584

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 282/571 (49%), Positives = 379/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           Q+LFRP++ W++KFR E+T       SW+  +  ++     +G             +   
Sbjct: 264 QVLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V+ +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  + LG  TM RV+VLI+IAS+IW+PVG+WIG RP  + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRC 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+ PYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVVPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|28872656|ref|NP_795275.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28855912|gb|AAO58970.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 584

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 283/569 (49%), Positives = 373/569 (65%), Gaps = 11/569 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             D L   L+   + ++L G  +   P +++   P++LD   LP+YA RTTLRM  A+  
Sbjct: 26  WADGLCLALLALFVALVLFGAGQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAA 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA
Sbjct: 86  SLIFTFVVATLAAKSRKAEHVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFTSQ WN+ FS YQSL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMM
Sbjct: 146 IFAIFTSQAWNLAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ 
Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQF 265

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           LFRP++ W++KFR E+T       SW+  L  ++                LS  +    +
Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWK 314

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L +I         ++     V  ++D  W  +V    +  +     +I       D++ 
Sbjct: 315 GLMLINGRGVSRLWKVKPTPGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVG 374

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              LG  TM RV+VLI IAS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V
Sbjct: 375 AFGLGLATMLRVIVLIAIASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + 
Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG
Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++M  FV+A NR LW PLY +  R L L
Sbjct: 555 IVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|330986971|gb|EGH85074.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 584

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 284/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   D +  V++   I ++L+G+ +   P   ++  P++LD   LP+YA RTTLRM  A+
Sbjct: 24  PFWADGICLVVIAVFITLVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+FTFV ATLAAKSR+   V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E 
Sbjct: 84  AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WN+ FS YQSL  +P DL EV+R F LS   +F  L +PF++PGLVWNM
Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+  M  VI  YD
Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W++KFR E+T       SW+  L  ++     +G             +   
Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
           C+ L +I +        +     V  +LD  W  +V    +  +     +I       D+
Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +    LG  TM RV+VLI+IAS+IW+PVG+WIG R   + ++QP AQ +AAFPANV FP 
Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGVWIGLRLVWAERLQPIAQFMAAFPANVLFPF 432

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +   HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR 
Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG+FPYYVTGA+TA GG+WNASIV+E  SWG  HL   GLG+YIA +T+ G FP V 
Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+A NR LW PLY +  R L L
Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583


>gi|217976878|ref|YP_002361025.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502254|gb|ACK49663.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 578

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 290/577 (50%), Positives = 393/577 (68%), Gaps = 10/577 (1%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + R+  PN +DLL   L+      + H     T+P    +    +LD   LP YA RTTL
Sbjct: 11  LGRKALPNQYDLLGLGLIFSAFIAIAHFSHGLTLPIAAPNSTVTSLDYAGLPYYAMRTTL 70

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +AM  SLLFTF YATLAAKSRR  +VL+P+LDI+QS+PILGFL+FTV +F+ L+PG 
Sbjct: 71  RMFAAMAASLLFTFTYATLAAKSRRAELVLIPLLDILQSVPILGFLSFTVTFFLGLFPGS 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNM FS YQSL ++PRDL EV+  F+LSGWQ+FW L  PF+MP
Sbjct: 131 ILGVECAAIFAIFTSQAWNMAFSFYQSLRSVPRDLVEVASGFQLSGWQRFWQLEAPFAMP 190

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GL+WNMMMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAI+++ + A+  A++TM  
Sbjct: 191 GLIWNMMMSMSGGWFFVVASEAISVGDTTIKLPGVGSYLALAIEQKRIDAVFAAVVTMAI 250

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
           VI  YDQLLFRP++ + ++FR+E + G   + S+V  LF +T++LR +     + F   +
Sbjct: 251 VILAYDQLLFRPLVAFGSRFRVELSAGQSQSRSFVRDLFLRTHWLRALTRPPSDLFQSFA 310

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
               +L R+          +  +   +  +S ++DI WF  +  +     W+ + Y+   
Sbjct: 311 LWRLELRRS----------HKFKPAPDPALSRLVDILWFVAIAAMIAWSGWRIVDYVSTE 360

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T+ D+   +     T+ RVVVL+ +A+I+W+PVG+WIG RP ++ KIQP AQ LAAFPA
Sbjct: 361 LTFADLGQAVEYTLFTLIRVVVLLALATIVWVPVGVWIGLRPALADKIQPLAQFLAAFPA 420

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           NV FP+ V  +  + LNP++WLS L++FGTQWYILFNVIAGA+AFPND KE  + F I G
Sbjct: 421 NVIFPIAVVLILRFSLNPDIWLSPLIVFGTQWYILFNVIAGAAAFPNDLKEAVAGFRIHG 480

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             WW+ +++P IFP+YVTGA+TA GG+WNA+IV+E   WG   +   G+GAYIAE+TEKG
Sbjct: 481 LDWWKSVMIPAIFPFYVTGALTASGGSWNAAIVAEYVRWGDTVVAAHGIGAYIAEATEKG 540

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +P++VLGV +M   V+  NR  W PL+    R LRL
Sbjct: 541 DYPKIVLGVAVMAAVVILFNRLFWRPLFGLAERRLRL 577


>gi|254497295|ref|ZP_05110103.1| ABC transporter, permease protein [Legionella drancourtii LLAP12]
 gi|254353523|gb|EET12250.1| ABC transporter, permease protein [Legionella drancourtii LLAP12]
          Length = 580

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 273/584 (46%), Positives = 371/584 (63%), Gaps = 12/584 (2%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             Y   P  + R  F N +DLL  +L+  ++  L     +   P  + D +PI+L   +L
Sbjct: 6   RFYFANPDRVGR--FINRWDLLLLILIFAVLFFLGWAGSQMATPYQLGDQIPISLVPENL 63

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P YA RT LR+  A+  S+LFTF    LAAK+RR   V++P +DI+QSIP+L FL+ TV 
Sbjct: 64  PFYALRTVLRLFIALFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSFLSITVT 123

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F++L+P  ++G E A+IFAIF +QVWNMTF  YQSL  IP DL+EV+  FRLS WQ+FW
Sbjct: 124 GFIHLFPHSLLGPECASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFW 183

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L VPFSM GL+WNMM+SMS  WFFVV SE I V    I LPGIGSYIALAI+++DL A+
Sbjct: 184 KLEVPFSMSGLLWNMMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHAV 243

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            YA+LTM+ VIFLYDQ+LFRP+I WS KF+ E +       SW++   R +  ++     
Sbjct: 244 GYAILTMVIVIFLYDQILFRPLIAWSEKFKFEPSPDESEYQSWLVDWIRCSRLMKR---- 299

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
               F+ + +            R   P+   ++   ++    +D FW  +V    +   W
Sbjct: 300 ----FTEIIDIFTNSFVNARWFRIGEPKAIKEIDFKRQ--KRIDRFWSTMVLFCVLSGGW 353

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+      D+L+V  LG  T  RV+ LI+++S+IWIPVG+WIG RP I+ +IQP 
Sbjct: 354 FLLRFILAELKVSDILHVFLLGAATGTRVIALIVLSSLIWIPVGVWIGLRPRIAQRIQPV 413

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q +AAFPAN+F+PL V  +  ++LN  +W++ LMI GTQWYILFNVIAGAS  P +   
Sbjct: 414 IQFVAAFPANLFYPLFVIAIVEFNLNVEIWVTPLMILGTQWYILFNVIAGASTIPRELYL 473

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F + GW WW+ ++LPGIFP+Y+TGAITA GGAWNASIV+E  SWG++ L+ TGLGA
Sbjct: 474 AADNFGLKGWLWWKRLVLPGIFPFYITGAITAAGGAWNASIVAEWVSWGNVTLKATGLGA 533

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           YI  ST  G FP++ LG  +MC +VL  N  +W PLY       
Sbjct: 534 YIQASTTIGDFPQIALGTAMMCLYVLTFNHLIWRPLYRLAEERF 577


>gi|330878195|gb|EGH12344.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 584

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 280/551 (50%), Positives = 368/551 (66%), Gaps = 11/551 (1%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTF  ATLAAKSR+ 
Sbjct: 44  FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKA 103

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQ
Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQ 163

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VG
Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           DT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR E+T 
Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTA 283

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 SW+  L  ++                LS  +    + L +I         ++  
Sbjct: 284 SSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
              V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI+I
Sbjct: 333 TPGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVSAFGLGLATMLRVIVLIVI 392

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           AS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM
Sbjct: 393 ASLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLM 452

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG
Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           +WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW P
Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572

Query: 577 LYLYGTRCLRL 587
           LY +  R L L
Sbjct: 573 LYGFAERRLSL 583


>gi|222106535|ref|YP_002547326.1| ABC-type anion transport system, duplicated permease component
           [Agrobacterium vitis S4]
 gi|221737714|gb|ACM38610.1| ABC-type anion transport system, duplicated permease component
           [Agrobacterium vitis S4]
          Length = 556

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 319/566 (56%), Positives = 413/566 (72%), Gaps = 11/566 (1%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +L+IG+I +  +G + TT+P   +D  P++LD  +LP YA RT LRML+A+V SL+
Sbjct: 1   MMALLLIIGVIVLFAYGERVTTIPLSALDAAPLSLDPTNLPIYALRTILRMLAAIVFSLI 60

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           FT +YA++AAKSRR  MV++P+LDI+QS+PILGFLTFTV +F+NL+PG+VIGAELAA+FA
Sbjct: 61  FTLIYASVAAKSRRAEMVMIPVLDILQSVPILGFLTFTVTFFLNLFPGRVIGAELAAVFA 120

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IFTSQ WNMTFS+YQS+ + P+DLEE +RSF+LSGWQ+FW L VPF+MPGLVWN MMSMS
Sbjct: 121 IFTSQAWNMTFSLYQSMRSQPKDLEEATRSFQLSGWQRFWRLDVPFAMPGLVWNTMMSMS 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           GGWFFVVASE I VG+T + LPGIGSY+ALAIK+QD+LA+ YA++ ML VI LYDQL+FR
Sbjct: 181 GGWFFVVASEAITVGNTTVTLPGIGSYVALAIKQQDILAVFYAVIAMLAVILLYDQLMFR 240

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321
           P++ W++KFR E T       SW+L L RK    R            L   +  + R L 
Sbjct: 241 PLVAWADKFRFETTASGVAPSSWMLDLLRKARVTRL-----------LLAPLNWVARQLW 289

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +R     +     ++   S ++D  W  ++   A   A+ S  Y+     + ++  VI 
Sbjct: 290 TLRLPKLRSTGSKTASPANSRVIDWIWIAIIACAAAWAAYISFDYLRASIGWSEIPTVIL 349

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            G IT+ RV+VL+ IA+++W+PVG+WIG RP +S K+QP AQ LAAFPAN+ FP+ V  +
Sbjct: 350 YGSITLLRVIVLMAIATVVWVPVGVWIGLRPKLSEKVQPLAQFLAAFPANIAFPVFVVVI 409

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            ++ LN ++WLS LMI GTQWYILFNVIAGASAFP+D KE A SFHITGWRWW  +ILPG
Sbjct: 410 VHFGLNADIWLSPLMILGTQWYILFNVIAGASAFPSDLKEAARSFHITGWRWWFKVILPG 469

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           IFPYY+TGAITA GG+WNASIV+EVASWG   L T GLG+YIA +T  G FP VVLG+++
Sbjct: 470 IFPYYITGAITASGGSWNASIVAEVASWGDTQLTTPGLGSYIANATTAGDFPRVVLGIIV 529

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587
           MC FV   NR +W PLY YG   LRL
Sbjct: 530 MCTFVTLFNRLVWRPLYAYGESRLRL 555


>gi|330810315|ref|YP_004354777.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378423|gb|AEA69773.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 546

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 289/557 (51%), Positives = 377/557 (67%), Gaps = 12/557 (2%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +   + HG+ +   P  ++D  P++LD+  LP+Y  RTTLRM  A+  S +F+ V ATLA
Sbjct: 1   MAAFVFHGLDQMNQPLGVLDSSPLSLDLVHLPEYTLRTTLRMFIALFASFVFSLVVATLA 60

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           AKSR+  +V++P LDI+QS+P+LGFLTFTVV+FM L+PGK  G E AAIFAIFTSQVWNM
Sbjct: 61  AKSRKAAIVILPALDILQSVPVLGFLTFTVVFFMGLFPGKETGVECAAIFAIFTSQVWNM 120

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           TFS YQSL  +P DL EVSR F  S WQ+F  L +PF+ PGLVWNMMMSMSGGWFFVVAS
Sbjct: 121 TFSFYQSLRTVPNDLYEVSRQFAFSPWQRFIRLELPFATPGLVWNMMMSMSGGWFFVVAS 180

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           E I VGDT + LPGIGS++ALAI++Q++ AI +A+L M+ VI  YD L FRP++ W++KF
Sbjct: 181 EAITVGDTTVSLPGIGSWLALAIEQQNIAAIAWAVLAMVAVIIAYDLLFFRPIVAWADKF 240

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           R E+T       S V  L R T  +  +  +  +  + L   ++KL R            
Sbjct: 241 RFEQTASQKRPRSRVYDLLRSTRLVPLVLLALGSIKASL--FLEKLPRL----------P 288

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            ++  ++ RVS   D  W  +V    I    Q   +I +   ++DV     LG IT+ RV
Sbjct: 289 SIRFKTSARVSRTADRVWLALVAAACIAGILQLSRFIGSTLGWEDVASTFGLGLITLVRV 348

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI++AS++W+P+G+WIG  P  + ++QP AQLLAAFPANV FP  V  +    LNP++
Sbjct: 349 SVLIVLASVVWVPIGVWIGLNPRWAERLQPIAQLLAAFPANVLFPFAVIAIVALKLNPDV 408

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASA P D +E A SFHI GW+WWR + LPG+FPYYVTGA
Sbjct: 409 WLSPLMILGTQWYILFNVIAGASALPTDLREAARSFHIHGWQWWRQVALPGVFPYYVTGA 468

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +TA GG+WNASIV+E  SWG  HL  +GLG++IA++T  G    V LGV++M  FV+  N
Sbjct: 469 LTAAGGSWNASIVAEAVSWGDHHLYASGLGSFIAQATTAGDLQRVALGVVVMSIFVVGFN 528

Query: 571 RFLWHPLYLYGTRCLRL 587
           R LW PLY +  R LR+
Sbjct: 529 RLLWRPLYGFAERRLRI 545


>gi|331017764|gb|EGH97820.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 584

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 280/551 (50%), Positives = 365/551 (66%), Gaps = 11/551 (1%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTFV ATL AKSR+ 
Sbjct: 44  FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLGAKSRKA 103

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQ
Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQ 163

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VG
Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           DT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQ LFRP++ W++KFR E+T 
Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTA 283

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 SW+  L   +                LS  +    + L +I         ++  
Sbjct: 284 SSKRPRSWMYSLLGGSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
              V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI I
Sbjct: 333 TPGVVRVIDYLWLALVMAGCLTASVYLFHFIEASLGFSDMVGAFGLGLATMLRVIVLIAI 392

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           AS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNPN+WLS LM
Sbjct: 393 ASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPNIWLSPLM 452

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG
Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           +WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW P
Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572

Query: 577 LYLYGTRCLRL 587
           LY +  R L L
Sbjct: 573 LYGFAERRLSL 583


>gi|330964413|gb|EGH64673.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 584

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 279/551 (50%), Positives = 368/551 (66%), Gaps = 11/551 (1%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  +   P D+++  P++LD   LP+YA RTTLRM  A+  SL+FTF  ATLAAKSR+ 
Sbjct: 44  FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKA 103

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS +Q
Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFFQ 163

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           SL  +P DL EVSR F LS   +F  L +PF++PGLVWNMMMSMSGGWFFVVA E I VG
Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           DT + LPGIGS++ALAI++++L AI +A+  M  VI  YDQLLFRP++ W++KFR E+T 
Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTA 283

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 SW+  L  ++                LS  +    + L +I         ++  
Sbjct: 284 SSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
              V  ++D  W  +V    +  +     +I     + D++    LG  TM RV+VLI+I
Sbjct: 333 TPGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVGAFGLGLATMLRVIVLIVI 392

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           AS+IW+P+G+WIG RP  + ++QP AQ +AAFPANV FP  V  +   HLNP++WLS LM
Sbjct: 393 ASLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLM 452

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG
Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           +WNASIV+E  SWG  HL+  GLG+YIA +T+ G FP V LG+++M  FV+A NR LW P
Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572

Query: 577 LYLYGTRCLRL 587
           LY +  R L L
Sbjct: 573 LYGFAERRLSL 583


>gi|241664824|ref|YP_002983184.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|240866851|gb|ACS64512.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 594

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 269/572 (47%), Positives = 366/572 (63%), Gaps = 12/572 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS-PLSNNVKK 315
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +   +       LS   ++
Sbjct: 274 QLLFRPLIAWADRFRFDTMSSEREPQSWLLDLLRRSEWVKALLERTAALAEHTLSWGAER 333

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
              T        P                      V+   A+      + ++ +   + +
Sbjct: 334 TRPTAAGSNGFLPRFPWSH-----------RVADVVIILAALMAVAHVLQFVRSEVGWAE 382

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ FP
Sbjct: 383 VGHVFWLGFLTMLRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFP 442

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W+
Sbjct: 443 LAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWK 502

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP +
Sbjct: 503 RFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRI 562

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 563 ALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|52840376|ref|YP_094175.1| ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627487|gb|AAU26228.1| ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 579

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 273/584 (46%), Positives = 370/584 (63%), Gaps = 12/584 (2%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             Y   P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +L
Sbjct: 5   RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P YA RT LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV 
Sbjct: 63  PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F++L+P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS  FRLS WQ+FW
Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFW 182

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VPFSM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+
Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +   
Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
              F +   N                 E       + +    LD  W  +V    I   W
Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP 
Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGSRVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q +AAFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D   
Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG 
Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           YI  ST  G FP++ LG  +MC +VLA N  +W PLY       
Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576


>gi|148553197|ref|YP_001260779.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
 gi|148498387|gb|ABQ66641.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
          Length = 582

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 287/575 (49%), Positives = 372/575 (64%), Gaps = 12/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN  D++A +L+ G+  +++ G +    P   +   P+TLD  +LP YA RTTLRM
Sbjct: 19  RVTAPNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNLPGYALRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +A+  SL FT    TLAA+SRR   ++VP LDI+QS+PILGFLTFTV +FM L+PG+ +
Sbjct: 79  FAALFASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVTFFMGLFPGRQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G ELA+IFAIFTSQ WNM FS YQSL ++P DLEEVSR F LS  ++F  L +PF+ P L
Sbjct: 139 GVELASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFLRLELPFATPAL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           VWN MMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI   D   + +A+  M  VI
Sbjct: 199 VWNAMMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGVAWAVGAMAVVI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQL+FRP++ W+++FR E+        SW   LFR+T  L  +          L   
Sbjct: 259 LLYDQLVFRPVVAWADRFRFEQVASTERPRSWAYELFRRTRLLPLLLMPLAGLGRALL-- 316

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
                  L  +R   P       +  R   + D  W   +    +  AW  IGY+     
Sbjct: 317 ------MLDPVRAPRPAGR----AEARRGVIGDRVWTAAIAIAVLFAAWTIIGYVGRTLD 366

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + +   V  L C+TM RV+ LI +AS+IW+PVG+WIG RP  + ++QP AQ LAAFPANV
Sbjct: 367 WAEAAAVFGLACLTMLRVLALIAVASLIWVPVGVWIGLRPQWAERLQPVAQFLAAFPANV 426

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP  V  +  + L+P++WLS LM+ GTQWYILFNVIAGASA P D +E A  F + GW+
Sbjct: 427 LFPFAVIAIVRWKLDPDIWLSPLMVMGTQWYILFNVIAGASAIPTDLREAAGMFGVRGWQ 486

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR + LPGIFPYYVTGA+TA GG+WNASIV+E  SWG  HL  +GLGA+IA++T  G +
Sbjct: 487 WWRQVALPGIFPYYVTGALTASGGSWNASIVAEAVSWGDDHLHASGLGAFIADATAIGDY 546

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P V LG+ +M  FV+A NR LW PLY +  R LRL
Sbjct: 547 PRVALGIAMMSLFVIAFNRLLWRPLYSFAERRLRL 581



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 93/268 (34%), Gaps = 6/268 (2%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYV 379
                     L++ +  R   +  +    +   V  G     + +  + N     D   +
Sbjct: 8   ARGLRPFSRMLRVTAPNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNL 67

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----P 435
                 T  R+   +  +    + +G            I P   +L + P   F      
Sbjct: 68  PGYALRTTLRMFAALFASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVT 127

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             +       L   L     +     W + F+      + P+D +EV+  F ++  R + 
Sbjct: 128 FFMGLFPGRQLGVELASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFL 187

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  V  A+ +  G W   + SE  + G+  +   G+G+++A + ++  F  V
Sbjct: 188 RLELPFATPALVWNAMMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGV 247

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              V  M   +L  ++ ++ P+  +  R
Sbjct: 248 AWAVGAMAVVILLYDQLVFRPVVAWADR 275


>gi|54293082|ref|YP_125497.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens]
 gi|54296116|ref|YP_122485.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris]
 gi|296105630|ref|YP_003617330.1| ABC transporter, permease protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|53749901|emb|CAH11283.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris]
 gi|53752914|emb|CAH14350.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens]
 gi|295647531|gb|ADG23378.1| ABC transporter, permease protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|307608865|emb|CBW98263.1| hypothetical protein LPW_01211 [Legionella pneumophila 130b]
          Length = 579

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 273/584 (46%), Positives = 370/584 (63%), Gaps = 12/584 (2%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             Y   P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +L
Sbjct: 5   RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P YA RT LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV 
Sbjct: 63  PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F++L+P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS  FRLS WQ+FW
Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFW 182

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VPFSM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+
Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +   
Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
              F +   N                 E       + +    LD  W  +V    I   W
Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP 
Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q +AAFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D   
Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG 
Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           YI  ST  G FP++ LG  +MC +VLA N  +W PLY       
Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576


>gi|148358279|ref|YP_001249486.1| ABC transporter permease [Legionella pneumophila str. Corby]
 gi|148280052|gb|ABQ54140.1| ABC transporter, permease protein [Legionella pneumophila str.
           Corby]
          Length = 579

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 272/584 (46%), Positives = 369/584 (63%), Gaps = 12/584 (2%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             Y   P   SR  F N +DLL  +L   ++  L     +   P  + D +PI+L+  +L
Sbjct: 5   RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P YA RT LRM  A++ S+LFTF+   LAAK+RR   +++P +DI+QSIP+L FL+ TV 
Sbjct: 63  PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F++L+P  ++G E A+IFAIF++QVWNMTF  YQSL  +P DL EVS   RLS WQ+FW
Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFW 182

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VPFSM GL+WNMM+SMS  WFFVV SE I V    I LPG+GSYIALAI ++DL A+
Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++       SW++ L R +  ++ +   
Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
              F +   N                 E       + +    LD  W  +V    I   W
Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             + +I+      D+ +V  LG  T  RV++LI+++S++WIPVG+WIG RP ++ KIQP 
Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q +AAFPAN+F+PL V  +  ++L+  +W++ LMI GTQWYILFNVIAGAS+ P D   
Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E  SWG+I L+ TGLG 
Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           YI  ST  G FP++ LG  +MC +VLA N  +W PLY       
Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576


>gi|73542714|ref|YP_297234.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72120127|gb|AAZ62390.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 584

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 266/571 (46%), Positives = 366/571 (64%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FD     +++ II ++    Q+  VP    + + + LD+  LP Y  RT++RML+A+
Sbjct: 26  PNRFDFALLPIILAIIVMVAFAAQQMNVPFVPGEPMTVHLDIAYLPYYLMRTSIRMLAAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL+F+  +A LA+K+R    VLVP LDI+QSIP+LGFL+ TV  F+ L+PG +IG E 
Sbjct: 86  AASLVFSLAFAALASKNRTAEKVLVPALDILQSIPVLGFLSITVTGFIALFPGNLIGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYIALAI++Q+L AI +A+L ML  I +YD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGQDIRLPGIGSYIALAIQQQNLAAIGWAILAMLVGILVYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ W+++FR E  +     +SW+L L R++ ++R +   +            + 
Sbjct: 266 QLLFRPLVAWADRFRFETLSQDNEPESWLLDLLRRSEWVRALLARTAALAERTLAWGAR- 324

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
                       +       + R     +     V+  VA+    + + ++ +   + +V
Sbjct: 325 -----------RQAPATAEPDPRRVQWRERAGNAVILLVALAALSRVMYFVHSEVGWLEV 373

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +V+WLG +TM RV+VLI +A++IW+P+GI IG  P ++   QP AQ LAAFPAN+ FPL
Sbjct: 374 GHVLWLGTLTMVRVIVLIALAAVIWVPIGIRIGLNPSVARIAQPVAQFLAAFPANLMFPL 433

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  +  + LNP +WLS L+IFGTQWYILFNV+AGAS  P + K  A +F + GW  W+ 
Sbjct: 434 VVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLAARNFGLRGWLLWKR 493

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIV+E  +WG   L  TGLG+YIAE+T +G FP + 
Sbjct: 494 FLIPAVFPSLLTGLVTAAGGSWNASIVAEYVTWGDRTLVATGLGSYIAETTARGDFPRIA 553

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 554 LGIGVMALFVVGFNRLLWNRLYQLAQERTRL 584


>gi|309780369|ref|ZP_07675120.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308921072|gb|EFP66718.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 594

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 268/571 (46%), Positives = 364/571 (63%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL                              ++   A+      + ++ +   + +V
Sbjct: 324 ERTLSWGAERTRPTAAGGNGFLPRFPWSHRVADVIIILAALVAVAHVLQFVRSEVGWAEV 383

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 384 GHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 443

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W+ 
Sbjct: 444 AVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWKR 503

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 504 FLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 563

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+++M  FV+  NR LW+ LY       RL
Sbjct: 564 LGIVVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|187930633|ref|YP_001901120.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|187727523|gb|ACD28688.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
          Length = 594

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 268/571 (46%), Positives = 363/571 (63%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + ++LDV  LP Y  RT++RML A+
Sbjct: 34  PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 94  GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A+L ML  I LYD
Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL                              ++   A+      + ++ +   + +V
Sbjct: 324 ERTLSWGAERTRPTAAGGNGFLPRFPWSHRVADVIIILAALVAVAHVLQFVRSEVGWAEV 383

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +V WLG +TM RV++LI +A+++W+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 384 GHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 443

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K  A +F + GW  W+ 
Sbjct: 444 AVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWKR 503

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 504 FLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 563

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 564 LGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594


>gi|30248980|ref|NP_841050.1| putative nitrate transport system permease protein [Nitrosomonas
           europaea ATCC 19718]
 gi|30138597|emb|CAD84888.1| putative nitrate transport system permease protein [Nitrosomonas
           europaea ATCC 19718]
          Length = 580

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 287/580 (49%), Positives = 380/580 (65%), Gaps = 7/580 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
              +S R     +DL+A +LV+G++  L    ++   P        I+L+   LP+Y  R
Sbjct: 7   SARLSHRFSAIFWDLVAVLLVLGMVVFLAQTSRDLMQPLAGPGETVISLEPSGLPEYVLR 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T+LRML+AMV+SL+FTF YAT AAKSRR G VL+P+LDI+QS+PILGF++ TVV+FM+  
Sbjct: 67  TSLRMLAAMVLSLIFTFTYATWAAKSRRAGQVLIPLLDILQSVPILGFISVTVVFFMSFA 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+++GAEL AIFAIFTSQ WNM FS YQSL  +P +L E SRSFRLS W +FW L VPF
Sbjct: 127 PGRMLGAELVAIFAIFTSQAWNMAFSFYQSLRTVPTELVEASRSFRLSPWMRFWKLEVPF 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP LVWNMMMSMS GWFFVVASE I VG+TV+ LPGIGSYIALAI ++DL A+  A+  
Sbjct: 187 AMPALVWNMMMSMSAGWFFVVASEAISVGNTVVTLPGIGSYIALAIDQRDLGAVGRAIAV 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI +YDQLLFRP++ W ++FR E+     P  SWVL   R++ ++            
Sbjct: 247 MLIVILIYDQLLFRPLVAWVDRFRFEQEADRNPPRSWVLMALRRSRWVAM-------AVV 299

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           PL    +   R              +      V   LD  W+  +  +     W+   ++
Sbjct: 300 PLVRMWRWTYRAGNDGASRELARTARNTMGSGVISWLDWLWYGAIAVICAVSMWKITVFV 359

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +   T  +V   ++LGC+TM RV VLI +AS+IW+PVG+WIG  P  +  IQP  Q +AA
Sbjct: 360 LQGVTPDEVGTTVFLGCVTMVRVFVLIAVASVIWVPVGVWIGLHPAAARIIQPVTQFMAA 419

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FPL VS +    L+P++WLS LMI GTQWYILFNVIAGAS  P + +++  +  
Sbjct: 420 FPANLLFPLAVSGIVVLRLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELRDIGINLG 479

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW WWR I LP +FP+Y+TGA+TA GG+WNASIV+E+A+WG   L+  GLGAYIAE+T
Sbjct: 480 VRGWLWWRRIALPAVFPFYMTGAVTASGGSWNASIVAELANWGDTTLKANGLGAYIAEAT 539

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G F  +VLG+ +M  FV+ +NR  W PLY+   R  RL
Sbjct: 540 AAGDFHRIVLGIAVMSAFVVLINRLFWRPLYILAERKFRL 579


>gi|270158574|ref|ZP_06187231.1| ABC transporter permease domain protein [Legionella longbeachae
           D-4968]
 gi|269990599|gb|EEZ96853.1| ABC transporter permease domain protein [Legionella longbeachae
           D-4968]
          Length = 537

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 261/544 (47%), Positives = 345/544 (63%), Gaps = 10/544 (1%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + + +PI+LD  +LP YA RT LRM  A+  S++FTF     AAK+RR   +++
Sbjct: 1   MATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIII 60

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +DI+QSIP+L FL+ TV  F++L+P  ++G E A+IFAIF +QVWNMTF  YQS+  +
Sbjct: 61  PAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTL 120

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P DL+EV+  FRLS WQ+FW L VPFSM  L+WNMM+SMS  WFFVV SE I V    I 
Sbjct: 121 PHDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIR 180

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           LPG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E +      
Sbjct: 181 LPGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEY 240

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
            SW++   R +  ++        F     N                 E+      + +  
Sbjct: 241 QSWLVDWMRGSRLMKQFAEIIGVFTDHFVN----------ARWMRLNESKAVKEIDLKKQ 290

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             LD FW   V       AW  + +I+      D+++V  LG  T  RV+ LII++S+IW
Sbjct: 291 RRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVICLIILSSLIW 350

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IPVG+WIG RP I+ KIQP  Q +AAFPAN+F+PL V  +  +HLN  +W++ LMI GTQ
Sbjct: 351 IPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTPLMILGTQ 410

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           WYILFNVIAGASA P +    A +F + GW WW+ + +PGIFP+Y+TGAITA GGAWNAS
Sbjct: 411 WYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAITAAGGAWNAS 470

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           IV+E  SWG+  LR TGLG YI  ST  G FP++ LG  +MC +VLA N  +W PLY   
Sbjct: 471 IVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHLIWRPLYRLA 530

Query: 582 TRCL 585
               
Sbjct: 531 EERF 534


>gi|78221745|ref|YP_383492.1| binding-protein dependent transport system inner membrane protein
           [Geobacter metallireducens GS-15]
 gi|78193000|gb|ABB30767.1| Binding-protein-dependent transport systems inner membrane
           component [Geobacter metallireducens GS-15]
          Length = 579

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 284/579 (49%), Positives = 377/579 (65%), Gaps = 11/579 (1%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRT 68
           F  +   PN +DL AF LV+GII +L  G +E  +P      VP ++ D   LP YA RT
Sbjct: 10  FRGKLTTPNAWDLAAFFLVMGIIALLAWGSREMALPYVPGKTVPSLSPDPWHLPYYALRT 69

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +RM +A+ +SL FT  YATLAAKSRRLG +LVP LDI+QS+PILGFL+ TV  F++L+P
Sbjct: 70  VIRMGAALGLSLAFTLTYATLAAKSRRLGPILVPALDILQSVPILGFLSVTVTGFISLFP 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G ++G E A+IFAIFTSQ WNM FS YQS+  +P+DL E +  F LS W++FW +  PF 
Sbjct: 130 GSLLGVEAASIFAIFTSQAWNMAFSFYQSMKTVPKDLGEAATIFGLSPWKRFWRVEAPFG 189

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L+WN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI  QDL AI +A+ TM
Sbjct: 190 VPPLIWNIMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYMALAIHRQDLGAIGWALATM 249

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
             VIFLYDQL FRP++ W+ KFR+E T    P +SW+L +F +T  +  +        + 
Sbjct: 250 ALVIFLYDQLFFRPLVAWAEKFRVELTESGAPPESWLLTIFTRTRLMGRLLRLIGALPAR 309

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L+    +  R     R+              V   +D  W  +    A+   W+   ++ 
Sbjct: 310 LAERFPRRRRLPRRSRYPIRPE---------VQRTIDRAWNAIFALAALYGLWKLATFV- 359

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +    ++VL V  LG  T+ RV VL+ +AS++WIPVG+ IG  P  ++++QP AQ LAAF
Sbjct: 360 SVIPLREVLSVFGLGLATLARVTVLLALASLLWIPVGVRIGLNPRWATRVQPVAQFLAAF 419

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+FFP+VV  +  + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++  +
Sbjct: 420 PANLFFPVVVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAATNLGL 479

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +GW  WR ++LPGIFP  VTG +TA GG WNASIV+E+ SWG   L  TGLG+ IA  TE
Sbjct: 480 SGWELWRRLLLPGIFPSLVTGLVTASGGTWNASIVAEMVSWGPTTLTATGLGSAIARWTE 539

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +G +P +VLG+ +M  FV+ LNR  W  LYL      RL
Sbjct: 540 QGDYPHIVLGIAVMSIFVVCLNRLFWRRLYLLAQTRYRL 578


>gi|15837013|ref|NP_297701.1| ABC transporter nitrate permease [Xylella fastidiosa 9a5c]
 gi|9105249|gb|AAF83221.1|AE003892_6 ABC transporter nitrate permease [Xylella fastidiosa 9a5c]
          Length = 584

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 292/576 (50%), Positives = 384/576 (66%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +    P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMAFLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+            L   
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
           + +L + + ++R+        +  + R  S   D  W  V+  VA    +     +    
Sbjct: 308 LTRLWQRVLLLRWTKRNRVTVVPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVTTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|300702458|ref|YP_003744058.1| binding-protein-dependent transporter [Ralstonia solanacearum
           CFBP2957]
 gi|299070119|emb|CBJ41408.1| Putative binding-protein-dependent transporter [Ralstonia
           solanacearum CFBP2957]
          Length = 586

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 270/571 (47%), Positives = 365/571 (63%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + + LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL               S              ++   A+   W  + ++ +   + +V
Sbjct: 316 ERTLAWGAERTRPKASGSNSFLPRFPWSGRVADVIIMLAALAALWHILQFVRSEVGWAEV 375

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+WLG +TM RV++LI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 376 GRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS  P + +  A +F + GW  W+ 
Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGWLMWKR 495

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 496 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGDFPRIA 555

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LYL      RL
Sbjct: 556 LGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586


>gi|317407655|gb|EFV87594.1| ABC transport system permease [Achromobacter xylosoxidans C54]
          Length = 577

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 255/569 (44%), Positives = 363/569 (63%), Gaps = 11/569 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N +D     LV+G++  + +G  + + P  + + +PI+LD   LP Y  RT LRM +A+ 
Sbjct: 20  NRWDWALLPLVLGVLAAMAYGASQMSRPFAVGEELPISLDPIYLPYYLLRTILRMFTALA 79

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SLLF+FV+A +AAK R     ++P+LDI+QS+PILGF    +  F+ L+PG ++G E A
Sbjct: 80  FSLLFSFVFAAIAAKFRTAEKAMIPMLDILQSVPILGFQAIAIAPFIALFPGNLLGVECA 139

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW L +P++ PGL+WNMM
Sbjct: 140 AIFAIFTSQAWNMAFSLYQSMRTVPAELNEAARVFRLSGWQRFWRLELPYATPGLLWNMM 199

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFF+VA+E I V    I LPGIGSYIA+AI  ++  AI +A+  M+  I LYDQ
Sbjct: 200 MSMSGGWFFLVAAEAISVAGQDIKLPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQ 259

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L FRP++ W++KFR E +       SW+L   R++ +++ +    W           ++ 
Sbjct: 260 LFFRPLLAWADKFRFEESQADVAQQSWLLDWTRRSRWMQALSNMFW----------ARMR 309

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R LG     +    ++  +           W  ++   A+   ++ + ++     + +VL
Sbjct: 310 RALGWFSVPYDGTSIRARAKAPDPRW-TRIWDSLLAAAALLATYKLVVFVHQEVGWGEVL 368

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +V+ LG IT+ RV+VLI +AS+IW+P+ +WIG RP  S ++Q  AQ LAAFP N+ FP V
Sbjct: 369 HVVGLGGITLARVMVLIGLASLIWVPIAVWIGLRPRYSQRVQAVAQFLAAFPVNLLFPAV 428

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + LNPN+WLS L+IFGTQWYILFNV+AGAS  PN+ +  A +  + GW  WR +
Sbjct: 429 VFVMVAFKLNPNIWLSPLIIFGTQWYILFNVVAGASTIPNELRLAAGNLGLKGWLLWRRV 488

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP +FP ++TGAITA GG+WNASIV+E  SWG+  L   GLG+YI + TE+G F  + L
Sbjct: 489 YLPAVFPSFITGAITASGGSWNASIVAEYVSWGNTSLVADGLGSYIKQMTEQGDFHRIAL 548

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           G+ +M  FV+ LNRF W  LYL      R
Sbjct: 549 GIGVMSIFVMLLNRFFWRKLYLLAEDRGR 577


>gi|83749465|ref|ZP_00946456.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207722076|ref|YP_002252514.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207744869|ref|YP_002261261.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83723862|gb|EAP71049.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206587250|emb|CAQ17834.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206596279|emb|CAQ63206.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 586

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 271/571 (47%), Positives = 365/571 (63%), Gaps = 10/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FDL    +++  I ++ +  ++  VP    + + + LDV  LP Y  RT++RML A+
Sbjct: 26  PNRFDLALLPIILAAIVLVAYAARQMNVPYIPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SL F+F +A +A+K+R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 86  AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DLEE +  FRLS WQ+FW L VPF+MPGL+WNM
Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYI+LAI++Q+L AI +A++ ML  I LYD
Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP+I W+++FR +  +      SW+L L R++ +++ +          L       
Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL               S              V+   A+   W  + ++ +   + +V
Sbjct: 316 ERTLAWGAERTRPKASNSNSFLPRFPWSGRVADVVIMLAALAALWHILQFVRSEVGWAEV 375

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+WLG +TM RV++LI +A++IW+P+GI IG  P+++   QP AQ LAAFPAN+ FPL
Sbjct: 376 GRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  ++ + LNP +WLS LMIFGTQWYILFNVIAGAS  P + +  A +F + GW  W+ 
Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGWLMWKR 495

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  SWG   L  TGLG+YIAE T KG FP + 
Sbjct: 496 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGDFPRIA 555

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LYL      RL
Sbjct: 556 LGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586


>gi|29655059|ref|NP_820751.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161829804|ref|YP_001597596.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|29542328|gb|AAO91265.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161761671|gb|ABX77313.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
          Length = 581

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 276/572 (48%), Positives = 372/572 (65%), Gaps = 10/572 (1%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  A
Sbjct: 19  IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M  SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E
Sbjct: 79  MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN
Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LY
Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+      + + N    
Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNAIVNWRLF 318

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +          +  N +   +L I W  ++        +    +I+    + +
Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|153206202|ref|ZP_01945465.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212217904|ref|YP_002304691.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
 gi|120577332|gb|EAX33956.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012166|gb|ACJ19546.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
          Length = 581

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  A
Sbjct: 19  IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M  SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E
Sbjct: 79  MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN
Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LY
Sbjct: 199 TMMSMSGSWIFLTASESISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+      +   N    
Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNATVNWRLF 318

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +          +  N +   +L I W  ++        +    +I+    + +
Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWKVLLILGVAAALFLLSKFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|165919264|ref|ZP_02219350.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|165917058|gb|EDR35662.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
          Length = 581

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  A
Sbjct: 19  IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M  SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E
Sbjct: 79  MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN
Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LY
Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+      +   N    
Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNATVNWRLF 318

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +          +  N +   +L I W  ++        +    +I+    + +
Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWKVLLILGVAAALFLLSKFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|187926710|ref|YP_001893055.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241665042|ref|YP_002983401.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187728464|gb|ACD29628.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240867069|gb|ACS64729.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 577

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 292/571 (51%), Positives = 383/571 (67%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DLLA +LV+G++ +L  G ++   P        I+L   +LP Y  RT  RM +A+
Sbjct: 18  PRWRDLLAMLLVLGMVLLLGSGARQMVGPLVAASQPEISLSPLALPAYVLRTVTRMFAAL 77

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            +SLLFTF YATLAAKSRR  MVL+P+LD++QS+PILG+L+FTVV+FM L+PG V+GAEL
Sbjct: 78  ALSLLFTFTYATLAAKSRRAEMVLIPLLDVLQSVPILGYLSFTVVFFMALFPGNVLGAEL 137

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AA+FAIFTSQ WNM FS YQ+L  IP DL+E SR FR S WQ+FW L VPF+MPGLVWNM
Sbjct: 138 AAVFAIFTSQAWNMAFSFYQALRTIPADLDEASRGFRASSWQRFWRLEVPFAMPGLVWNM 197

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VGD  + LPG+G+Y+A AI ++DL A+ +A+L M   I LYD
Sbjct: 198 MMSMSGGWFFVVASEAISVGDVRVALPGVGAYVARAIAQRDLGAVGWAILAMAVAIVLYD 257

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRPM+ W++KFR E+T    P  SW+L LF ++ +++          +P+   + + 
Sbjct: 258 QLLFRPMVAWADKFRFEQTASQMPPRSWLLDLFHRSAWVQ-------RMMAPVGIALHQA 310

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R    +R+  P    +    +R   + D  W  +    A                + DV
Sbjct: 311 AR--AQLRWPLPAMRWKGAMPRR---LGDALWLGLCAAGAAYAMLALYRLAGRTLAWTDV 365

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V   G  T+ RV+VLI +ASI+W+PVG+ +G  P  ++++QP AQ LAAFPAN+ FP+
Sbjct: 366 ATVARSGAFTLLRVMVLIALASIVWVPVGVAVGLSPRWTARVQPLAQFLAAFPANLLFPV 425

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  +  +H + ++WLSLLMI GTQWYILFNVIAGA+AFP+D +E A+SF I    WWR 
Sbjct: 426 VVFLIVRFHGSVDVWLSLLMILGTQWYILFNVIAGAAAFPSDLRETATSFRIRAPNWWRK 485

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPGI PYYVTG ITA GGAWNASIV+E  SWG +HL+  GLGAY+A+ T  G +P + 
Sbjct: 486 VMLPGILPYYVTGVITASGGAWNASIVAEAVSWGAVHLQAQGLGAYVAQQTAAGDYPRIA 545

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+  M   V+A NR LW PLY Y  R +RL
Sbjct: 546 LGIAAMSLMVIATNRLLWRPLYAYAERRMRL 576


>gi|167561672|ref|ZP_02354588.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
          Length = 577

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 284/583 (48%), Positives = 374/583 (64%), Gaps = 12/583 (2%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           ++L     R       D +A +LV+ +I +L  G ++  +P D+     I+L   +LP Y
Sbjct: 6   DLLAGGRWRPRTLGWRDAIAVLLVLALIVLLGSGARQMALPLDVARPEAISLSPLALPGY 65

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RT LRML+A+  S  FTF YATLAA+SR    VL+P+LD++QS+PILG+L+FTVV+F+
Sbjct: 66  ALRTVLRMLAALGASFAFTFAYATLAARSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFL 125

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++ P    GAELAAIFAIFTSQ WNM FS YQSLC +PRDL+E SRS R +GWQ+FW L 
Sbjct: 126 SITPSSTFGAELAAIFAIFTSQAWNMAFSFYQSLCTVPRDLDEASRSLRQTGWQRFWRLE 185

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VPF+MPGL WN MMSMSGGWFFVVASE I VGD  I LPG+G+Y+A AI E+DL A+ YA
Sbjct: 186 VPFAMPGLAWNAMMSMSGGWFFVVASEAISVGDLHIALPGVGAYVARAIAERDLAAVGYA 245

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  M   I LYDQLLFRPM+ W++KFR ++T       SW+L L  + +  + +G     
Sbjct: 246 IAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG----- 300

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +PL   + +  R    +    P +   L           I WF +     +       
Sbjct: 301 --TPLGAMLHRAARARLSLGARLPAHERSLSR-----RFGRIVWFSLCAAGIVYAGIGLF 353

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +     T+ DV+ V   G +T+ RV+VLI +AS +W+P+G+ IG RP  ++ +QP AQ 
Sbjct: 354 RFAAPVLTWADVVDVARNGALTLARVLVLIGVASAVWVPIGVLIGLRPRATAFVQPIAQF 413

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP  V  ++++ L P +WLS LMI GTQWYILFNVIAGA+ FP+D KE A+
Sbjct: 414 LAAFPANLLFPPAVFAIAHFELTPAIWLSPLMILGTQWYILFNVIAGATVFPDDLKEAAA 473

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S  +    WW  ++LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L  +GLGAY+A
Sbjct: 474 SLRVRTPTWWTKVVLPGILPYYVTGAITASGGAWNASIVSELVGWGHTTLDASGLGAYVA 533

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             T  G +P + LGV  M   V+A+NR +W PLY +  R  RL
Sbjct: 534 RMTAAGDYPRIALGVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576


>gi|212211812|ref|YP_002302748.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
 gi|212010222|gb|ACJ17603.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
          Length = 581

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 274/572 (47%), Positives = 372/572 (65%), Gaps = 10/572 (1%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  A
Sbjct: 19  IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M  SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E
Sbjct: 79  MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN
Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSG W F+ ASE I + +  I LPGIGSY ALAI+  + +AI+Y ++ M  VI LY
Sbjct: 199 TMMSMSGSWIFLTASEAISIANHNIMLPGIGSYTALAIEHANKMAIIYVIVMMFIVIALY 258

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+   +  + + N    
Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSSAGNAIVNWRLF 318

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +          +  N +   +L I W  ++        +    +I+    + +
Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI++E  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LNR +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580


>gi|114326819|ref|YP_743976.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114314993|gb|ABI61053.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 574

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 309/582 (53%), Positives = 406/582 (69%), Gaps = 12/582 (2%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
             + P   SRR  PN+FDL++  +V   +  ++H  + T VP D      ++LD  +LP 
Sbjct: 3   ETVFPALASRRRLPNLFDLVSIAVVFAALVAVVHVTRGTLVPLDDRYAHAVSLDPWNLPA 62

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           YA RTTLRML A+  +L FTF YAT AAKSRR  M+L+P+LDI+QS+PILGFLTFTVV+F
Sbjct: 63  YAFRTTLRMLLALAAALFFTFTYATWAAKSRRAAMLLIPMLDILQSVPILGFLTFTVVFF 122

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           MNL+PG+V+GAELA+IFAIFTSQ WNM FS YQSL  +P DL E +R+FRLS WQ+FW L
Sbjct: 123 MNLFPGQVLGAELASIFAIFTSQAWNMAFSFYQSLTTLPGDLVEATRAFRLSPWQRFWKL 182

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VPF+MPGLVWN MMSMSGGWFFVVASE + VGD    LPGIGSY+ALA+++QD+ AI Y
Sbjct: 183 EVPFAMPGLVWNAMMSMSGGWFFVVASEAVSVGDNTWMLPGIGSYVALALRQQDMAAIGY 242

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           A+L M  VI LYDQLLFRP++ WS KFR E T G    + W+L L R+T +LR       
Sbjct: 243 AILAMAVVILLYDQLLFRPLVAWSEKFRFETTQGSTSEEPWLLRLLRRTAWLRAGSELLA 302

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
           + F+  +N           I F  P     + ++ + S ++D+ W  +V  + +  AW  
Sbjct: 303 SGFNAFTNL---------RIGFRLPR---LIRASNQPSRIVDMLWGLIVFAMLVWCAWHI 350

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       DVL  + +GCITM RV+VL+I+A++IW+P+G+ IG RPH++  +QP  Q
Sbjct: 351 YAFLSGRIAPSDVLQAVLMGCITMLRVIVLMIVATLIWVPIGVAIGLRPHVARFVQPLVQ 410

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            LAAFPAN+FFPL V  ++ + LNP++WL+ LMI G QWYI+FNVIAGA+AFP D +E A
Sbjct: 411 FLAAFPANLFFPLFVLVIARFSLNPDIWLTPLMILGAQWYIMFNVIAGAAAFPGDMQEAA 470

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             FHI G+ WWR +ILPGIFPYY+TGAITA GGAWNA+IVSEV +WG   L+  GLG +I
Sbjct: 471 RGFHIRGFLWWRRVILPGIFPYYITGAITASGGAWNAAIVSEVVTWGPNTLQAHGLGRFI 530

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           A+++  G++P  +LGV +M  FV+  NR LW PL+ + TR L
Sbjct: 531 ADASADGNWPRTILGVAVMSAFVVGFNRALWKPLFNFATRRL 572


>gi|114332379|ref|YP_748601.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
 gi|114309393|gb|ABI60636.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
          Length = 579

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 286/577 (49%), Positives = 385/577 (66%), Gaps = 10/577 (1%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           SRR     +D +A +LV+G++  L    ++   P        I+LD  +LP+YA RT+LR
Sbjct: 11  SRRFSALFWDGVAALLVLGLVVFLAQASRDFMQPLVESGHDVISLDPSALPEYALRTSLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML AMV+SL+FTF YAT AAKS R   +L+P+LDI+QS+P+LGF++ TVV+F++  PGK+
Sbjct: 71  MLLAMVLSLIFTFTYATWAAKSWRAEQILIPLLDILQSVPVLGFISITVVFFLSFAPGKM 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +GAELA++FAIFTSQ WNM FS YQSL  +PR+L+EVSRSFRLS W +FW L VPF+MP 
Sbjct: 131 LGAELASVFAIFTSQAWNMAFSFYQSLHTVPRELDEVSRSFRLSPWMRFWKLEVPFAMPA 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WNMMMSMSG WFFVVASE I VGDT++ LPGIGSYIALAI ++DL AI +A+  ML V
Sbjct: 191 LIWNMMMSMSGSWFFVVASEAISVGDTIVTLPGIGSYIALAIDQRDLGAIGWAIAVMLIV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGI-YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
           I +YDQLLFRP++ W+++FR E+ TG   P  SWVL +  ++ ++ F        +    
Sbjct: 251 ILIYDQLLFRPLVAWADRFRFEQETGGMPPPHSWVLTVLHRSQWITFTTALFARIWRWTY 310

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
              ++  R          + F    +   +   +D  W+  +  V   I+W+   +I+  
Sbjct: 311 RKSQQPARK---------KAFTWKGTGTNLKPWVDWLWYGTITVVCAIISWKITFFILQE 361

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +V   ++LG ITM RV VLI +AS+IW+PVG+W+G RP  +   QP AQ +AAFPA
Sbjct: 362 VALAEVGTAMFLGFITMVRVFVLIAVASVIWVPVGVWLGLRPGAARIAQPIAQFMAAFPA 421

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP  V  +    L+P++WLS LMI GTQWYILFNVIAGAS  P +  +++++  + G
Sbjct: 422 NLLFPPAVYGIVVLQLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELHDISANLGVRG 481

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W WWR I LP +FP+YVTGAITA GG+WNASIV+E+ SWG   L+  GLGAYI E+T  G
Sbjct: 482 WLWWRRIALPAVFPFYVTGAITASGGSWNASIVAEIVSWGSTTLQAHGLGAYITEATVAG 541

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            F  V LG+ +M  FV+ +NR  W PLY    R  RL
Sbjct: 542 DFHRVALGIAVMSAFVVVINRLFWRPLYALAERKFRL 578


>gi|328543644|ref|YP_004303753.1| nitrate transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326413389|gb|ADZ70452.1| Putative nitrate transport system permease protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 577

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 293/582 (50%), Positives = 383/582 (65%), Gaps = 11/582 (1%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
                   R   +++DL+A +LV+G +  L    +    P    D   I LD  +LP YA
Sbjct: 6   RQTSLAHGRRSTSLWDLIAILLVLGALVFLAEASRGLMQPLPAADENVIVLDPAALPGYA 65

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + TTLRML+AMV+SL+FTF YAT AAKS R   VL+P+LDI+QS+PILGF++ TVV+F++
Sbjct: 66  AHTTLRMLAAMVLSLVFTFTYATWAAKSHRAERVLIPLLDILQSVPILGFISVTVVFFLS 125

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L PG ++GAELAA+FAIFTSQ WNM FS YQSL  +P +L E +RSFRLS W +FW L V
Sbjct: 126 LAPGMMLGAELAAVFAIFTSQAWNMAFSFYQSLRTVPAELAEAARSFRLSPWMRFWRLEV 185

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PF+MP LVWNMMMSMSGGWFFVVA+E I VG T + LPGIGSYIALAI E+DL AI +A+
Sbjct: 186 PFAMPALVWNMMMSMSGGWFFVVAAEAISVGGTTVTLPGIGSYIALAIAERDLGAIGWAI 245

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
            TML VI +YDQLLFRP++ W+++FR E+ TG+ P  SWVL   R++  +          
Sbjct: 246 GTMLLVILIYDQLLFRPLVAWADRFRFEQETGVAPPRSWVLMTLRRSRLV---------- 295

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            +  + ++    R                    R +  LD      V  VA+    ++  
Sbjct: 296 -ARATASLGAAWRWSYRALPKPGAGSASAAHPGRGARWLDRLLLGSVAVVALLGVVKAAQ 354

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++       DV   + LG  TM RV VLI IASIIW+PVG+WIG RP  +   QP AQ +
Sbjct: 355 FLTAGVGLADVATAVLLGFATMIRVFVLIAIASIIWVPVGVWIGLRPGAARIAQPVAQFM 414

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AAFPAN+ FPL VS +  + L+P++WLS LMI GTQWYILFNV+AGAS  P++ +++ +S
Sbjct: 415 AAFPANLLFPLAVSVIVGFRLDPDIWLSPLMILGTQWYILFNVVAGASTIPSELRDIGAS 474

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             + GW WW+ I LP +FP+YVTGAITA GG+WNASIV+EVASWG   L+  GLGA+IA+
Sbjct: 475 LRVRGWLWWQRIALPAVFPFYVTGAITASGGSWNASIVAEVASWGQDRLQAHGLGAFIAD 534

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +TE G F  +VLG+ +M  FV+ +NR  W PLY +  R  RL
Sbjct: 535 ATEAGDFHRIVLGIAVMSAFVVVINRIFWRPLYAFAERKYRL 576


>gi|154705925|ref|YP_001423658.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154355211|gb|ABS76673.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 581

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN +D++A + V+ +I +L +G        DI + + I+LD   LP YA RT LRM  A
Sbjct: 19  IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M  SLLFTFV+ T AAKSR+   V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E
Sbjct: 79  MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAIFAIFT+QVWNMT S YQSL  +P DL E +  F+LS WQ+FW + VPF+MPGL+WN
Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPLDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSG W F+ ASE I V +  I LPGIGSY ALAI+  + +AI+Y ++TM  VI LY
Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQLLFRP++ W+ KF  E + G   A SWVL LF++T FLRFIG+      + + N    
Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNAIVNWRLF 318

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +          +  N +   +L I W  ++        +    +I+    + +
Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL+V +LG +T  RV +LII++S+IW+P+G+W+G RP+ S  +QP AQ  AAFPAN+ FP
Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  +  Y LN N+W S LMI G QWYILFNV+AG  A P +      + ++ GW WW+
Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             ILPGIFPYY+TGAITA GGAWN SI+SE  SWG+ HL  TGLGAYIA  +++G FP +
Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIISEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV++M  +V+ LN  +W PLY       R+
Sbjct: 549 ALGVMVMSLYVVILNCTMWRPLYRLAEERFRV 580


>gi|161522946|ref|YP_001585875.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|160346499|gb|ABX19583.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
          Length = 600

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 265/571 (46%), Positives = 362/571 (63%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DL A ++V+G + +     ++   P  +     I+L   +LP Y  RT  RM +A+
Sbjct: 41  PGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFAAL 100

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GAE 
Sbjct: 101 LASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGAEC 160

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN 
Sbjct: 161 AAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNA 220

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M   I LYD
Sbjct: 221 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYD 280

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ WS +FR         + SW+L LF ++ ++              +    + 
Sbjct: 281 QLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARPRG 340

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
             +    R   P                D+ WF +        A++         T+ D+
Sbjct: 341 FMSAWRDRIVLPPR------------TGDVLWFALCGAGCAYAAYELFRLGRATLTWTDL 388

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V   G +T  RV VL+ +AS+IW+P+GI IG RP ++++IQP  Q LAAFP N+ FP+
Sbjct: 389 RVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTNLLFPV 448

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +    L P++WL  LMI G QWY+LFNVIAGASAFP D +E A+ F +    WWR+
Sbjct: 449 AVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRH 508

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG+ PY+VTGAI A GGAWNASIV+E  SWG   L   GLGAYIA  T+ G +P + 
Sbjct: 509 VMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIA 568

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGV +M   V+A NR +W P+Y +  R  RL
Sbjct: 569 LGVAVMSLLVIATNRLVWRPMYAFAERRTRL 599



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 91/263 (34%), Gaps = 4/263 (1%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                  L +   + ++ ML +  F ++ G++       +              +     
Sbjct: 31  LRGGRWTLPVPGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTL 90

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ R+   ++ + +                  + P   +L + P   +    V      
Sbjct: 91  RTVARMFAALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSL 150

Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L         +     W + F+        P D  E + SF ++ W+ +  + +P
Sbjct: 151 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVP 210

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V  A+ +  G W   + SE  + G++H+   G+GAY+A++        V   ++
Sbjct: 211 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 270

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
            M   ++  ++ L+ PL  +  R
Sbjct: 271 AMSVAIVLYDQLLFRPLVAWSER 293


>gi|167835552|ref|ZP_02462435.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 578

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 282/570 (49%), Positives = 373/570 (65%), Gaps = 11/570 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +L  G+++ ++P DI     I+L   +LP Y  RT LRML+A+ 
Sbjct: 19  GWRDAVALLLVLALIVLLGSGVRQMSLPLDIARPEAISLSPLALPGYVLRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S+ FTF YA LAAKSR    VL+P+LD++QS+PILG+L+FTVV+F+++ PG  +GAELA
Sbjct: 79  ASIAFTFAYAPLAAKSRTAETVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGTTLGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFFVVASE I VG   I LPG+G+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 MSMSGGWFFVVASEAISVGGLHIALPGVGAYVARAIAERDLAAVGWAIAAMTIAITLYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G       +PL   + +  
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGATLHRAA 311

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R     R       L          +  I W  +   +A+      +       ++ DV+
Sbjct: 312 RA----RLSLGALRLSTRERALSRRIARIVWLSLCAALAVYAGVALLRIAAPALSWFDVV 367

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+PVG+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 368 DVARNGALTLARVLVLIGVATVVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 427

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGA+AFP+D KE A+S  +    WWR +
Sbjct: 428 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGATAFPDDLKEAAASLRVRTPTWWREV 487

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  +   GLGAYIA +T  G +P + L
Sbjct: 488 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTIDAAGLGAYIARTTAAGDYPRIAL 547

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 548 GVAAMSLLVIAMNRLIWRPLYAFAERRSRL 577


>gi|28199540|ref|NP_779854.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1]
 gi|182682275|ref|YP_001830435.1| binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa M23]
 gi|28057655|gb|AAO29503.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1]
 gi|182632385|gb|ACB93161.1| binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa M23]
 gi|307578552|gb|ADN62521.1| ABC transporter nitrate permease [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 584

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 293/576 (50%), Positives = 385/576 (66%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +  + P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+            L   
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
           + +L + + ++R+        L  + R  S   D  W  V+  VA    +     +    
Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSTDANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|113869274|ref|YP_727763.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528050|emb|CAJ94395.1| ABC-type transporter, duplicated permease domains: TauT family
           [Ralstonia eutropha H16]
          Length = 583

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 276/582 (47%), Positives = 366/582 (62%), Gaps = 14/582 (2%)

Query: 8   PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           P F S+  R  PN FDL    +++ +I ++    Q+   P      + + LDV  LP Y 
Sbjct: 14  PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFTAQQMNAPFQPDQQLAVHLDVAYLPYYL 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            RT++RML+A+  SLLF+  +A LA+KSR    VLVP LDI+QSIP+LGFL+ TV  F+ 
Sbjct: 74  MRTSIRMLAALAASLLFSLAFAALASKSRTAEKVLVPALDILQSIPVLGFLSITVTGFIA 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+PG + G E AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L V
Sbjct: 134 LFPGNIAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLMEAAAMFRLSPWQRFWRLEV 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PF+MPGL+WNMMMSMSGGWFFVVASE I V    I LPGIGSYIALAI++QDL AI +A+
Sbjct: 194 PFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L ML  I LYDQLLFRP++ W+++FR E         SW+L L R++ ++  +       
Sbjct: 254 LAMLAGILLYDQLLFRPLVAWADRFRFETQAQDKLPQSWLLDLLRRSAWVGAV------- 306

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              L+       RTL                N R +         V+  VA+    +   
Sbjct: 307 ---LAQTAALAGRTLAWGARRGQAPAQP--DNPRRALWFGRVRDAVIVLVALAALLRVGY 361

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++ +   + +V +V+WLG ITM RVVVLI +A+++W+P+GI IG  P ++   QP AQ L
Sbjct: 362 FVHSEVGWAEVGHVLWLGTITMVRVVVLIALAALVWVPIGIRIGLSPELARIAQPIAQFL 421

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AAFPAN+ FPL V  +  + LNP +WLS L+IFGTQWYILFNV+AGAS  P + K    +
Sbjct: 422 AAFPANLMFPLAVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLATRN 481

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F + GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  +WG   +  TGLG+YIAE
Sbjct: 482 FGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYIAE 541

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +T +G FP + LG+++M  FV+  NR LW+ LY       RL
Sbjct: 542 TTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 583


>gi|71899312|ref|ZP_00681473.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|71730938|gb|EAO33008.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
          Length = 584

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 293/576 (50%), Positives = 385/576 (66%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN++DL+A  L++ +   LLHG +  + P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+            L   
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQLPRSWVYDLICRTRLLKR-----------LVAP 307

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
           + +L + + ++R+        L  + R  S   D  W  V+  VA    +     +    
Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|237810965|ref|YP_002895416.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|237503515|gb|ACQ95833.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
          Length = 621

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 280/570 (49%), Positives = 371/570 (65%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 63  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 182

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G       +PL   + +  
Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAA 355

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    +    P          R   +  + W  +    A+      +       ++ D+ 
Sbjct: 356 RARASLGVRLPTR-----GRARAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 471 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 56  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 175

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 296 AIALYDQLLFRPMVAWAHK 314


>gi|152980896|ref|YP_001353349.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280973|gb|ABR89383.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 577

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 263/572 (45%), Positives = 366/572 (63%), Gaps = 11/572 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I PN +D     LV+ ++  +  G  + T P  + ++ PI+LD  +LP Y  RT LRM  
Sbjct: 17  ISPNRWDWALLPLVLAVLVAVGFGAMQMTRPFVVGEVTPISLDPANLPYYLLRTILRMFI 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+  +LLF+FV+A +AAK R    V++P LDI+QS+PILGF    +  F+  +PG ++G 
Sbjct: 77  ALGCALLFSFVFAAIAAKYRAAEKVMIPTLDILQSVPILGFQAIAIAPFIAFFPGSLLGV 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIF+SQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW L +P++MPGL+W
Sbjct: 137 ECAAIFAIFSSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRLELPYAMPGLLW 196

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFF+VA+E I V +  I LPGIG+YIA+AI+ +DL AIL+A+  ML  I L
Sbjct: 197 NMMMSMSGGWFFLVAAEAISVANQDIKLPGIGAYIAVAIEAKDLHAILWAIGAMLAGIVL 256

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQL FRP++ W++KFR E + G     SW+L   R++ ++R      W           
Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGETEQRSWLLNWGRRSRWMRAGTDRMW----------A 306

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L  TLG     +     +  S + +  M    W  V+   A    ++   ++ +   + 
Sbjct: 307 MLRSTLGWFSVSYDGTAPR-ASARVIHPMWMRVWNVVLLLAAGLAVYRLGIFVHSEVGWA 365

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +V +V+WLG IT+ RV++LI +AS++W+P+ +WIG RP  S ++Q  AQ LAAFP N+ F
Sbjct: 366 EVGHVLWLGVITLTRVLLLIALASLVWVPIAVWIGLRPKYSQRVQGLAQFLAAFPVNLMF 425

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLVV  +    LNPN+WLS LM+FGTQWYILFNV+AGAS  PN+ +  + +  + GW  W
Sbjct: 426 PLVVYLLLTMQLNPNIWLSPLMVFGTQWYILFNVVAGASTIPNELRLASDNLGLKGWLKW 485

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + + LP +FP YVTGAITA GG+WNASIV+E  +WG   L   GLG+YI + T+ G F  
Sbjct: 486 KRVYLPAVFPSYVTGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDAGDFHR 545

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + LG+ +MC FV+ LNRF W  LYL      R
Sbjct: 546 IALGIGVMCIFVMLLNRFFWRKLYLLAEDRSR 577


>gi|71274644|ref|ZP_00650932.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Dixon]
 gi|71899643|ref|ZP_00681797.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|170730910|ref|YP_001776343.1| putative nitrate transport system permease [Xylella fastidiosa M12]
 gi|71164376|gb|EAO14090.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Dixon]
 gi|71730595|gb|EAO32672.1| Binding-protein-dependent transport systems inner membrane
           component [Xylella fastidiosa Ann-1]
 gi|167965703|gb|ACA12713.1| putative nitrate transport system permease protein [Xylella
           fastidiosa M12]
          Length = 584

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 294/576 (51%), Positives = 384/576 (66%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   PN +DL+A  L++ +   LLHG +    P   + +  ++LD   LP+Y  RTTLRM
Sbjct: 19  RAQLPNAYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +AM  SLLFTFV ATLAAKS+R   ++VP LD++QS+P+LGFLTFTV +F+ L+PG  +
Sbjct: 79  FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           GAE A++FA+FTSQ WNM FS YQSL  +PRDL+EVSR F  S W +FW L VPF+MPGL
Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI  Q   A+ +A+  M  +I
Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIANQQFGAVAWAVAAMALLI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            LYDQLLFRP++VW++KFR+E T G     SWV  L  +T  L+            L   
Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
           + +L + + ++R+        L  + RV S   D  W  V+  VA    +     +    
Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRVGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +D+   +     T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP  Q LAAFPAN
Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V FP  V  +     NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A  + +  W
Sbjct: 428 VLFPFAVVAIVSAGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+  GLG+YIA +TE G 
Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P V+LGV++M  FV   NR LW  L+++  R LRL
Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583


>gi|226939379|ref|YP_002794452.1| ABC transporter nitrate permease [Laribacter hongkongensis HLHK9]
 gi|226714305|gb|ACO73443.1| probable ABC transporter nitrate permease [Laribacter hongkongensis
           HLHK9]
          Length = 576

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 287/573 (50%), Positives = 388/573 (67%), Gaps = 11/573 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
             P  +D LAF L+ G++ +  HG++E   P  I+   P++LD  +LP YA  TTLRML+
Sbjct: 14  FRPTPWDGLAFALIFGLLLLFGHGVREAWQPLAILQAEPVSLDPANLPAYALYTTLRMLA 73

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ +S LFT  YATLAA+S R G +++P LDI+QSIP+LG+L+FTV +F+ L+PG+++GA
Sbjct: 74  ALAVSFLFTLGYATLAARSARAGKLMIPALDILQSIPVLGYLSFTVTFFLALFPGRMMGA 133

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNM FS+YQSL  +PRDL EV+ S RL+ WQ+FW L +P++MPGLVW
Sbjct: 134 ECAAIFAIFTSQAWNMAFSLYQSLTTLPRDLVEVAASLRLTAWQRFWKLDLPYAMPGLVW 193

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSG WFFVVASE +VVG   + LPGIGSY+A+AI  +DL A+ + +LTML VI L
Sbjct: 194 NMMMSMSGSWFFVVASEALVVGQQQVMLPGIGSYLAVAIDVRDLGAVGWVVLTMLVVIIL 253

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQ+LFRP++ WS KF L+ T G+  + SW+L L  +   ++ +          L     
Sbjct: 254 YDQVLFRPLVAWSEKFNLQVTAGVAGSGSWLLTLGERARLIQTL----------LVRPAG 303

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L   +  +    P    Q  +        D  W   +  +A+   W    Y+     + 
Sbjct: 304 RLLSHVAQLPLG-PRLRWQAEAPASTPGWPDRLWLAGLTALALWALWSVWHYLAQAVDFH 362

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           DVL V  LG +T+ RV VLI++AS++W+PVG+WIG RP ++ ++Q  AQ LAAFPAN+ F
Sbjct: 363 DVLAVFGLGALTLLRVAVLIVLASLVWVPVGVWIGLRPQLAGRVQAMAQFLAAFPANLLF 422

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P  V  + ++ L+PN+WLS L+IFGTQWYILFNV+AGA AFP +++EVAS+  I G  WW
Sbjct: 423 PACVVLIIHFRLDPNVWLSPLLIFGTQWYILFNVVAGAQAFPAEYREVASNLQIRGGLWW 482

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LPGIFPY++TGA+TA GGAWNASIV E  SWG+  L   GLG+YIAE T  G  P+
Sbjct: 483 RKVMLPGIFPYFLTGALTASGGAWNASIVGEYVSWGNDVLVAKGLGSYIAEHTASGQHPQ 542

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           V+LG+L+M  +V+  NR LW PL     R L L
Sbjct: 543 VLLGILVMAVYVVLFNRLLWRPLQELAERRLSL 575


>gi|170742462|ref|YP_001771117.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196736|gb|ACA18683.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 602

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 292/583 (50%), Positives = 388/583 (66%), Gaps = 4/583 (0%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +   + PN +D+ AF++VIG +   LHG+ E   P   +D  P+ LD   LP YA RT
Sbjct: 19  GRVGAMLIPNGYDVAAFLVVIGGLIATLHGVHEMRAPLAALDGEPVRLDPWLLPDYALRT 78

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           TLR+ +AM  SL+FT + A LAAKSR+  +V+VP LDI+QS+P+LGFL+FTV +F+ L+P
Sbjct: 79  TLRLFAAMAASLVFTVLVAPLAAKSRKAELVIVPALDILQSVPVLGFLSFTVAFFLGLFP 138

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+ +GAE AAIFA+FT+Q WNM FS YQSL N+PRDL EV+R FRLS WQ+F  L  PF+
Sbjct: 139 GRQLGAECAAIFAVFTAQAWNMAFSFYQSLRNLPRDLTEVTRHFRLSPWQRFVRLEAPFA 198

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGLVWN MMSMSG WFF+VASE I VGDT I LPGIG+++ALAI  +DL AI +A+  +
Sbjct: 199 VPGLVWNAMMSMSGSWFFIVASEAISVGDTRITLPGIGAWLALAIDRKDLAAIAWAVAAI 258

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
             VI LYDQL+FRP++ W++KFR E+T       S+V  L R+T  LR I        + 
Sbjct: 259 AAVILLYDQLVFRPIVAWADKFRFEQTAAQARPRSFVYDLLRRTRALRGIAALVGAAAAL 318

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLC----SNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           L + ++                 L+L     +   ++ + D  W   V  +A    W + 
Sbjct: 319 LGSVIRAAAPFRRASSLLPATRKLRLAKPLLAKPLLATLADRAWLVAVVALAASALWIAA 378

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++       D++  + LG +T+ RVVVLI +AS+IW+P+G+WIG RP ++   QP AQ 
Sbjct: 379 DFVRATLGLGDLVEAVALGALTLLRVVVLIAVASVIWVPIGVWIGLRPAVAEATQPLAQF 438

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           LAAFPAN+ FP  V  +     +PN+WLS LM+ GTQ YILFNV+AGASAFP D +E A+
Sbjct: 439 LAAFPANILFPFAVVAIVATGADPNIWLSPLMVLGTQCYILFNVVAGASAFPTDLREAAT 498

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + +  W+WWR  ILPGIFPYYVTGA+TA GG+WNASIV+EVASWG   L+  GLGAYIA
Sbjct: 499 LYRMRSWQWWRDAILPGIFPYYVTGALTASGGSWNASIVAEVASWGDTKLKAAGLGAYIA 558

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++T+ G +P VVLGV +M  FV+  NR +W PLY YG R  RL
Sbjct: 559 QATDAGDYPRVVLGVAVMSLFVVVFNRLVWRPLYAYGERRFRL 601


>gi|83721275|ref|YP_441179.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|167618011|ref|ZP_02386642.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257140157|ref|ZP_05588419.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|83655100|gb|ABC39163.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 577

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 282/570 (49%), Positives = 367/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +L  G ++  +P        I+L   +LP Y  RT LRML+A+ 
Sbjct: 19  GWRDAVALLLVLALIVVLGSGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YA+LAAKSR    VL+P+LD++QS+PILG+L+FTVV+F+++ PG   GAELA
Sbjct: 79  ASFVFTFAYASLAAKSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFFVVASE I VGD  I LPG+G+Y+A AI E++L AI +A+  M   I LYDQ
Sbjct: 199 MSMSGGWFFVVASEAISVGDLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G       +PL   + +  
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAA 311

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    +          L           + WF +    A+      +       ++ DV 
Sbjct: 312 RARLSLGVRLSARERSLSR-----RAGRVVWFSLCAAGALYAGAALLRIAAPALSWSDVA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI IA+ +W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGIATAVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR I
Sbjct: 427 VFAIVRFRLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREI 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WG   L  +GLGAY+A +T  G +P + L
Sbjct: 487 VLPGILPYYVTGAITASGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576


>gi|167579935|ref|ZP_02372809.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 577

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 282/570 (49%), Positives = 368/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +L  G ++  +P        I+L   +LP Y  RT LRML+A+ 
Sbjct: 19  GWRDAVALLLVLALIVVLGSGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YA+LAAKSR    VL+P+LD++QS+PILG+L+FTVV+F+++ PG   GAELA
Sbjct: 79  ASFVFTFAYASLAAKSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFFVVASE I VGD  I LPG+G+Y+A AI E++L AI +A+  M   I LYDQ
Sbjct: 199 MSMSGGWFFVVASEAISVGDLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G       +PL   + +  
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAA 311

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    +          +           + WF +    A+      +       ++ DV 
Sbjct: 312 RARLSLGVRLSARERSMSR-----RAGRVVWFSLCAAGALYAGAALLRIAAPALSWSDVA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI IA+ +W+PVG+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGIATAVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR I
Sbjct: 427 VFAIVRFGLAPAIWLSALMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREI 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WG   L  +GLGAY+A +T  G +P + L
Sbjct: 487 VLPGILPYYVTGAITASGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576


>gi|194290861|ref|YP_002006768.1| binding-protein-dependent transporter inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224696|emb|CAQ70707.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 584

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 271/582 (46%), Positives = 365/582 (62%), Gaps = 13/582 (2%)

Query: 8   PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           P F S+  R  PN FDL    +++ +I ++    Q+  VP      + + LDV  LP Y 
Sbjct: 14  PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFAAQQMNVPFRPDQPLAVHLDVAYLPYYL 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            RT++RML+A+  SLLF+  +A LA+KSR    VLVP LDI+QSIP+LGFL+ TV  F+ 
Sbjct: 74  MRTSVRMLAALAASLLFSLAFAALASKSRSAEKVLVPALDILQSIPVLGFLSITVTGFIA 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+PG + G E AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L V
Sbjct: 134 LFPGNLAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLLEAAAMFRLSPWQRFWRLEV 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P++MPGL+WNMMMSMSGGWFFVVASE I V    I LPGIGSYIALAI++QDL AI +A+
Sbjct: 194 PYAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           + ML  I LYDQLLFRP++ W+++FR E         SW+L L R++            +
Sbjct: 254 VAMLAGILLYDQLLFRPLVAWADRFRFETLAQDKLPQSWLLDLLRRS-----------AW 302

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              L      L                    + R +  L       +  VA+    +   
Sbjct: 303 AGALLAQAAALGSRTLAWGARGRAPAPARPIDPRRARWLGRARDTAIVLVALAALLRVGY 362

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++ +   + +V++V+WLG +TM RV+VLI +A+++W+P+GI IG  P ++   QP AQ L
Sbjct: 363 FVHSEVGWSEVVHVLWLGTLTMVRVIVLIALAALVWVPIGIRIGLNPDLARIAQPVAQFL 422

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           AAFPAN+ FPL V  ++ + LNP +WLS L+IFGTQWYILFNVIAGAS  P + +  A +
Sbjct: 423 AAFPANLMFPLAVMLIARFGLNPEIWLSPLLIFGTQWYILFNVIAGASGIPTELRLAARN 482

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F + GW  W+  ++P +FP  +TG +TA GG+WNASIVSE  +WG   +  TGLG+YIAE
Sbjct: 483 FGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYIAE 542

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +T +G FP + LG+++M  FV+  NR LW+ LY       RL
Sbjct: 543 TTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 584


>gi|83310424|ref|YP_420688.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1]
 gi|82945265|dbj|BAE50129.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1]
          Length = 579

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 274/577 (47%), Positives = 375/577 (64%), Gaps = 8/577 (1%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++  + PN +DL    ++  ++ +L +G  + T P D+ + + ++LD   LP Y  R+ L
Sbjct: 10  VAPELKPNFWDLAIIPIIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +A++ SL+FT +YA+LAAK   L  VL+PILDI+QSIPILGFL+ TV  F+ L+PG 
Sbjct: 70  RMAAALLASLIFTLIYASLAAKVPALEKVLIPILDILQSIPILGFLSITVTGFIALFPGN 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNMTFS+Y SL  +P DL E S  F LS WQ+FW L +P++MP
Sbjct: 130 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTVPNDLIEASEMFHLSPWQRFWRLELPWAMP 189

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GLVWNMMMS+SGGWFFVVASE I V    I LPG+GSYIALAI E++L AI +AML +L 
Sbjct: 190 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAMLAVLA 249

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
            I +YDQL+FRP++ W++KF+++   G    +SW+L L ++    R++       +   +
Sbjct: 250 GIMIYDQLMFRPLVAWADKFKVDSAPGEQQPESWLLTLMQRGRLFRYLARLPSAAWDRFT 309

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +++  R    +  H P   + L S        +  W  ++   A+G   +   +I   
Sbjct: 310 FLLRQ--REETTLFHHAPIRMVTLPS------WAERVWDGLLILAALGALVEVGLFIHGA 361

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +V  V+  G  T  RVVVLI +AS+IW+PVG+WIG RP ++  +Q  AQ LAAFPA
Sbjct: 362 IGLWEVWQVLLYGLTTALRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAAFPA 421

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  + ++  N ++W S LMI GTQWYILFNVIAGASA P D K+ A +  ++G
Sbjct: 422 NLMFPVAVVLIVHFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLGLSG 481

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  W+  ILP IFP YVTGA+TA GG+WNASIVSE+ SWG   L   GLG+YIA +T  G
Sbjct: 482 WLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARATADG 541

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP + LG+ +MC FV+  NRFLW  LY+     LRL
Sbjct: 542 DFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 578


>gi|254187628|ref|ZP_04894140.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157935308|gb|EDO90978.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 621

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 63  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 182

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 362

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 363 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 471 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 56  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 175

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 296 AIALYDQLLFRPMVAWAHK 314


>gi|94312116|ref|YP_585326.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355968|gb|ABF10057.1| ABC-type transporter, permease component [Cupriavidus metallidurans
           CH34]
          Length = 581

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 266/571 (46%), Positives = 366/571 (64%), Gaps = 11/571 (1%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN FD     +++ +I I+    ++  VP    D + + LDV SLP Y  RT++RML+A+
Sbjct: 22  PNRFDFALLPIILAVIVIVAFAAKQMVVPYQPGDALSVQLDVASLPYYLMRTSIRMLAAL 81

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             SLLF+F +A +A+++R    V+VP LDI+QSIP+LGFL+ TV  F+ L+PG ++G E 
Sbjct: 82  AASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 141

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNM FS+YQS   IP DL E +  FRLS WQ+FW L VP++MPGL+WNM
Sbjct: 142 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPYAMPGLLWNM 201

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I V    I LPGIGSYIALAI++Q+L AI +A++ ML  I +YD
Sbjct: 202 MMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQNLPAIGWAIVAMLVGILIYD 261

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           Q LFRP++ W+++FR E         SW+L L R++ ++  +          L       
Sbjct: 262 QFLFRPLVAWADRFRFETLAQDTMPQSWLLDLLRRSAWVHAL----------LKWTASLG 311

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL           +   +  R S  L+     V+  +A+   ++ + ++ +   + + 
Sbjct: 312 GRTLAWS-ARHRNMVVLPAAPARWSPWLERLRDTVIIVIALAALYRVVHFVHSEVGWGEA 370

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +V+WLG +TM RV+VLI +A++IW+P+GI IG  P ++   QP AQ +AAFPAN+ FPL
Sbjct: 371 AHVLWLGVLTMTRVIVLIALAALIWVPIGIRIGLNPSVARIAQPIAQFMAAFPANLMFPL 430

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +  + LNP +WLS LMIFGTQWYILFNV+AGAS  P + +  A +F + GW  WR 
Sbjct: 431 AVMAIVRFGLNPEIWLSPLMIFGTQWYILFNVVAGASGIPTELRLAARNFGLKGWLMWRR 490

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P +FP  +TG +TA GG+WNASIVSE  +WG   L  TGLG+YIAE T +G FP + 
Sbjct: 491 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTLVATGLGSYIAEMTARGDFPRIA 550

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LG+ +M  FV+  NR LW+ LY       RL
Sbjct: 551 LGIGVMALFVVGFNRLLWNRLYDLAQLRTRL 581


>gi|160872910|ref|ZP_02063042.1| ABC transporter, permease protein [Rickettsiella grylli]
 gi|159121709|gb|EDP47047.1| ABC transporter, permease protein [Rickettsiella grylli]
          Length = 577

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 260/585 (44%), Positives = 373/585 (63%), Gaps = 12/585 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +YN      S +I PN +D +A ++V+G++   +   ++ T P  +     +TLD   LP
Sbjct: 4   IYNRFSFRSSFKILPNAWDFVALIMVLGMLAAFVWAGKQITSPYHVGQPFALTLDPLQLP 63

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +YA  T LR+ +AM  SLLFTF   TLAAK++R   +++P +DI+QS+P++G L+ T+V 
Sbjct: 64  KYALFTVLRLFTAMAFSLLFTFTVGTLAAKNKRAARIIIPCIDILQSVPVIGLLSITIVG 123

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+ L+ G  +G E AAIFA+FT+QVWN+T S YQSL ++P +L+E +  F LS WQ+FW 
Sbjct: 124 FITLFQGSRLGPEAAAIFAVFTAQVWNITLSFYQSLRSVPTELKEAADIFHLSSWQRFWR 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L VPFSMPGL+WN+MMSMS  W F++ASE I V +  I LPGIGSY+ LAI    +  ++
Sbjct: 184 LDVPFSMPGLLWNIMMSMSASWIFLIASESISVNNQTIILPGIGSYLGLAINRASISGVI 243

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           Y +LTM  VI LYDQLLFRP++ WS KF  E+ +  Y + SW+  L ++T  L+++G   
Sbjct: 244 YTILTMFVVILLYDQLLFRPLLNWSKKFTFEQVSQEYVSRSWLTSLLQQTYILKYLGRFF 303

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
                 + N               F             +  +D  W+ +         W 
Sbjct: 304 GKLGDTIVNI------------SFFKTKKEVSAKKSGSNKFIDFIWYSMTFVFVSLSLWL 351

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I+ + +  ++++V +LGCIT  R++ +I+IASIIWIP+G++IG    I+  IQP A
Sbjct: 352 LLQFILKNLSLHELIHVFFLGCITALRIISIILIASIIWIPIGVFIGLNRRIAEWIQPIA 411

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q  AAFPANV FP+VV  +  YHLN  +W + L++ GTQWYILFNVIAG +A P D KEV
Sbjct: 412 QFFAAFPANVLFPIVVILILKYHLNFEIWSTPLLLLGTQWYILFNVIAGTAALPEDLKEV 471

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           +S+F + GW+WWR +ILPGIFP+++TG ITA GG WN +I++E+ +WG I L +TGLGAY
Sbjct: 472 SSNFGVKGWQWWRRLILPGIFPHWITGTITAIGGGWNLTILTEIINWGSITLVSTGLGAY 531

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           IA+S + G FP + LG+ +M  FVL +N  +W PLY       RL
Sbjct: 532 IAKSADAGDFPRIALGMAMMSLFVLVMNHLVWRPLYNLSQSRYRL 576


>gi|254196922|ref|ZP_04903346.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|169653665|gb|EDS86358.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 621

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 63  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 182

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 362

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 363 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 471 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 56  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 175

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 296 AIALYDQLLFRPMVAWAHK 314


>gi|182678590|ref|YP_001832736.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634473|gb|ACB95247.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 578

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 288/587 (49%), Positives = 391/587 (66%), Gaps = 10/587 (1%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M    +   F+ R+  PN +D  AF+L++     + +G    T+P    +   I+LD  +
Sbjct: 1   MLARFVSLAFLDRKSLPNPYDFAAFILLLAAFVAVAYGSSGLTLPLSAPEATHISLDYGA 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP YA RTTLRM +A+  SL+FTF YATLAAKS+R  +VL+P+LDI+QS+PILGFL+FTV
Sbjct: 61  LPYYALRTTLRMFAAIAASLVFTFTYATLAAKSQRAALVLIPLLDILQSVPILGFLSFTV 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F++L+PG  +G E AA+FAIFTSQ WNM FS YQSL ++PRDL EV+  F LS WQKF
Sbjct: 121 TFFLHLFPGSTLGVECAAVFAIFTSQAWNMAFSFYQSLRSLPRDLVEVANGFHLSPWQKF 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W L  P++MP L+WN MMSMSGGWFFVVASE I VGDT + LPGIGSY+A AI+ + + A
Sbjct: 181 WQLETPYAMPALIWNTMMSMSGGWFFVVASEAISVGDTTVKLPGIGSYLAQAIEMRRIDA 240

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           ++ A+  M  VI LYDQLLFRP++V++ KFR+E +       SWV  LF +T +LR +  
Sbjct: 241 VIAAVAAMAIVILLYDQLLFRPLVVFAGKFRVELSASQTKESSWVADLFNRTRWLRALMS 300

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                 S ++    +L                 +      S +LD+ W  ++  +++   
Sbjct: 301 MPVQTLSSIALWRLELP----------FWRAQAIDKQAHSSRVLDLLWITLIAFLSLWAL 350

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
              I ++    T+ D+   + L   TM RVV+L+ +A+++W+P+G++IG RP ++ KIQP
Sbjct: 351 RFVIVFVGQTLTFADIQESLILTFFTMLRVVLLMALATLVWVPIGVFIGLRPALAEKIQP 410

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            AQ LAAFPANV FP+VV  +  + LNP++WLS L+IFGTQWYILFNVIAG  AFPND K
Sbjct: 411 LAQFLAAFPANVVFPIVVVVIVRFGLNPDIWLSFLIIFGTQWYILFNVIAGTMAFPNDLK 470

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E ASSF I GW WW  +ILPGIFP+YVTGA+TA GG+WNA+IV+E   WG + +   G+G
Sbjct: 471 EAASSFGIKGWNWWTSVILPGIFPFYVTGALTASGGSWNAAIVAESVKWGDVSIEAHGIG 530

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           AYIA++T KG +P +VLGV +M   V+  NR +W PL+    R LRL
Sbjct: 531 AYIADATAKGDYPRIVLGVTVMSIVVILFNRLVWRPLFGLAERRLRL 577


>gi|23013971|ref|ZP_00053815.1| COG4986: ABC-type anion transport system, duplicated permease
           component [Magnetospirillum magnetotacticum MS-1]
          Length = 582

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 272/577 (47%), Positives = 371/577 (64%), Gaps = 8/577 (1%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++  + PN +DL    ++  ++ +L +G  + T P D+ + + ++LD   LP Y  R+ L
Sbjct: 13  VAPELKPNFWDLAIIPMIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 72

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           RM +A++ SL FT VYATLAAK   L  VL+P+LDI+QSIPILGFL+ TV  F+ L+PG 
Sbjct: 73  RMAAALLASLAFTLVYATLAAKVPALEKVLIPVLDILQSIPILGFLSITVTGFIALFPGN 132

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++G E AAIFAIFTSQ WNMTFS+Y SL     DL E S  F LS WQ+FW L +P++MP
Sbjct: 133 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTERYDLIEASEMFHLSPWQRFWRLELPWAMP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           GLVWNMMMS+SGGWFFVVASE I V    I LPG+GSYIALAI E++L AI +A+L +L 
Sbjct: 193 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAVLAVLA 252

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310
            I +YDQL+FRP++ W++KF+++   G    +SW+L L ++    R +       +   +
Sbjct: 253 GIMIYDQLMFRPLVAWADKFKVDSLPGEQQPESWLLTLMQRGRMFRTLARLPSAMWDRFT 312

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +++  R    +    P + + L         ++  W  ++   A+G   +   +I   
Sbjct: 313 FLLRRKDR--AQLFHQAPIHMVTLP------RWVERTWDGLLICGAVGALVEVALFIHGS 364

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +V  V+  G  T FRVVVLI +AS+IW+PVG+WIG RP ++  +Q  AQ LAAFPA
Sbjct: 365 IGLWEVGQVLLYGFATAFRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAAFPA 424

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  +  +  N ++W S LMI GTQWYILFNVIAGASA P D K+ A +  ++G
Sbjct: 425 NLMFPVAVVLIVRFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLGLSG 484

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  W+  ILP IFP YVTGA+TA GG+WNASIVSE+ SWG   L   GLG+YIA +T  G
Sbjct: 485 WLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARATADG 544

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            FP + LG+ +MC FV+  NRFLW  LY+     LRL
Sbjct: 545 DFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 581


>gi|298506983|gb|ADI85706.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400]
          Length = 578

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 281/574 (48%), Positives = 373/574 (64%), Gaps = 13/574 (2%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLS 74
            PN++D+ AF+LV+G++ +L  G +E         IVP ++LD   LP YA RT +RM +
Sbjct: 15  LPNLWDVAAFLLVLGVVALLAWGSREMAATFVPGKIVPSLSLDPRHLPYYALRTVIRMGA 74

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ +SL FT  Y TLAAKSRRL  +LVP LDI+QS+PILGFL+ TV  F+ L+PG ++G 
Sbjct: 75  ALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSVPILGFLSVTVTGFIALFPGSLMGV 134

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A+IFAIFTSQ WNM FS YQSL  IPRDL E +  F LSGWQ+FW +  PF++P LVW
Sbjct: 135 EAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPLVW 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           N+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI  QD+ AI +A+ TML VI L
Sbjct: 195 NIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVALAIHRQDMGAIAWALATMLAVILL 254

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNNV 313
           YDQL FRP++ W+ KFR+E +      +SW L LF +T FL R +  +            
Sbjct: 255 YDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFARTRFLARALSLAGALPELLTERLP 314

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           ++     G  R             +  + ++D  W       A+   W+   ++ +   +
Sbjct: 315 RRRRPRTGEHRHR----------GRPAARIMDRIWNAAFAVAALWALWKLARFV-SVIPF 363

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L V  LG  TM RV VL+I+AS+ W+P+G+ IG  P  ++++QP AQ LAAFPAN+ 
Sbjct: 364 GEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPANLL 423

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP  V  +  + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++  ++GW  
Sbjct: 424 FPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAANLGLSGWEL 483

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR ++LPGIFP  +TG +TA GG WNASIV+EV SWG   L  TGLG+ IA  TE+G +P
Sbjct: 484 WRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSWGPTTLTATGLGSAIARWTEQGDYP 543

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +VLG+ +M  +V+ LNRF W  LYL      RL
Sbjct: 544 HIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 577


>gi|189348224|ref|YP_001941420.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|189338362|dbj|BAG47430.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 577

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 265/571 (46%), Positives = 362/571 (63%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DL A ++V+G + +     ++   P  +     I+L   +LP Y  RT  RM +A+
Sbjct: 18  PGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFAAL 77

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GAE 
Sbjct: 78  LASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGAEC 137

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN 
Sbjct: 138 AAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNA 197

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M   I LYD
Sbjct: 198 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYD 257

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ WS +FR         + SW+L LF ++ ++              +    + 
Sbjct: 258 QLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARPRG 317

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
             +    R   P                D+ WF +        A++         T+ D+
Sbjct: 318 FMSAWRDRIVLPPR------------TGDVLWFALCGAGCAYAAYELFRLGRATLTWTDL 365

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V   G +T  RV VL+ +AS+IW+P+GI IG RP ++++IQP  Q LAAFP N+ FP+
Sbjct: 366 RVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTNLLFPV 425

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +    L P++WL  LMI G QWY+LFNVIAGASAFP D +E A+ F +    WWR+
Sbjct: 426 AVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRH 485

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG+ PY+VTGAI A GGAWNASIV+E  SWG   L   GLGAYIA  T+ G +P + 
Sbjct: 486 VMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIA 545

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGV +M   V+A NR +W P+Y +  R  RL
Sbjct: 546 LGVAVMSLLVIATNRLVWRPMYAFAERRTRL 576



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 91/263 (34%), Gaps = 4/263 (1%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                  L +   + ++ ML +  F ++ G++       +              +     
Sbjct: 8   LRGGRWTLPVPGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTL 67

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ R+   ++ + +                  + P   +L + P   +    V      
Sbjct: 68  RTVARMFAALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSL 127

Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L         +     W + F+        P D  E + SF ++ W+ +  + +P
Sbjct: 128 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVP 187

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V  A+ +  G W   + SE  + G++H+   G+GAY+A++        V   ++
Sbjct: 188 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 247

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
            M   ++  ++ L+ PL  +  R
Sbjct: 248 AMSVAIVLYDQLLFRPLVAWSER 270


>gi|134094843|ref|YP_001099918.1| putative transmembrane ABC transporter protein [Herminiimonas
           arsenicoxydans]
 gi|133738746|emb|CAL61793.1| putative ABC-type transport system, permease component
           [Herminiimonas arsenicoxydans]
          Length = 577

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 259/570 (45%), Positives = 362/570 (63%), Gaps = 11/570 (1%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I PN +D     LV+ ++  +  G  + + P  + +  PI+LD   LP Y  RT LRM  
Sbjct: 17  ISPNRWDWALLPLVLIVLLAVAFGAAQMSRPFMVGEATPISLDPAYLPYYLLRTILRMFM 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+  SLLF+FV+A +AAK R    +++P+LDI+QS+PILGF    +  F+  +PG ++G 
Sbjct: 77  ALGFSLLFSFVFAAIAAKYRAAEKIMIPMLDILQSVPILGFQAIAIAPFIAFFPGNLLGV 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E AAIFAIFTSQ WNM FS+YQS+  +P +L E +R FRLSGWQ+FW + +P++MPGL+W
Sbjct: 137 ECAAIFAIFTSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRMELPYAMPGLLW 196

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           NMMMSMSGGWFF+VA+E I V    I LPGIG+YIA+AI+ +DL AIL+A+  ML  I L
Sbjct: 197 NMMMSMSGGWFFLVAAEAISVAGQDIKLPGIGAYIAVAIEARDLHAILWAIGAMLAGIVL 256

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           YDQL FRP++ W++KFR E + G     SW+L   R++ ++R      W+          
Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGDTAQRSWLLDWGRRSRWMRAFSARVWSL--------- 307

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L RTLG           Q  S + +       W  +V   ++   ++   +I +     
Sbjct: 308 -LRRTLGWFSLRHDGTSPQ-TSARTIHPWWPRIWDGLVLFASLLAVFRLALFIHSDIGLT 365

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L+V+ LG IT+ RV++LI +AS+IW+P+ +WIG RP  S  +Q  AQ LAAFP N+ F
Sbjct: 366 EILHVVKLGFITLLRVLLLIGLASLIWVPIAVWIGLRPKYSQCVQGAAQFLAAFPVNLMF 425

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLVV  +    LNP++WLS LM+FGTQWYILFNV+AGA+  PN+ +  + +  + GW  W
Sbjct: 426 PLVVYLLVSMQLNPDIWLSPLMVFGTQWYILFNVVAGAATIPNELRLASDNLGLKGWLKW 485

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + + LP +FP Y+TGAITA GG+WNASIV+E  +WG   L   GLG+YI + T+ G F  
Sbjct: 486 KRVYLPAVFPSYITGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDIGDFHR 545

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           + LG+ +MC FV+ LNRF W  LYL     
Sbjct: 546 IGLGIGVMCIFVMLLNRFFWRKLYLLAEDR 575


>gi|326387996|ref|ZP_08209600.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207497|gb|EGD58310.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 581

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 287/575 (49%), Positives = 363/575 (63%), Gaps = 13/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   P+  D +AFV++ G+  I     + T  P   + + P+TLD   LP YA RT LRM
Sbjct: 19  RLTRPSREDAIAFVILGGLAAIFFRTAEATVAPLSTLQLEPLTLDPSYLPYYALRTVLRM 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+  S +FT V ATLAA+SR LG ++VP LDI+QS+PILGFLTFTV +FM L+PG V+
Sbjct: 79  FVALFASTVFTLVVATLAARSRHLGQLIVPALDILQSVPILGFLTFTVTFFMGLFPGSVL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAI TSQ WNM FS YQSL  IP DLEE +  +RLS  ++F  L +PF+ P L
Sbjct: 139 GVECASIFAILTSQAWNMAFSFYQSLRAIPSDLEEATVIYRLSPIRRFLKLDLPFATPAL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           VWN MMSMSGGWFFVVASE I VG T + LPGIGS++ALAI  +D LA+  A+  M  VI
Sbjct: 199 VWNAMMSMSGGWFFVVASEAITVGKTTVTLPGIGSWLALAIGRRDFLAVGEAVAAMALVI 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
             YDQL FRP++ W+++FR E T       SWV  L R+T  L  +          L   
Sbjct: 259 VAYDQLFFRPIVAWADRFRFEMTASAERPRSWVFDLLRRTRLLPVVLAPLGAIGRLLLAF 318

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
             ++ R              +     R   +L+  W  +V   A         YI+    
Sbjct: 319 EPRVGRR-------------KAIGPARSYPLLEKVWQALVIVAATAALVLLSRYIMRSLM 365

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + DVL  + L  +TM RV+VLI +AS++W+PVG+WIG RP  + ++QP AQ LAAFPANV
Sbjct: 366 WGDVLTAVLLAGLTMIRVMVLIALASLVWVPVGVWIGLRPVWAERLQPLAQFLAAFPANV 425

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP  V  +  + L P++WLS LMI GTQWYILFNVIAGASA P D +E A  F + GW+
Sbjct: 426 LFPFAVMAIVRFDLAPDVWLSPLMILGTQWYILFNVIAGASAIPTDLREAAWMFRVRGWQ 485

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           WWR + LPGIFPYYVTGA+TA GG+WNASIV+E   WG+ HL   GLG++IAE+T  G +
Sbjct: 486 WWRQVALPGIFPYYVTGALTASGGSWNASIVAEAVDWGNRHLVARGLGSFIAEATTAGDY 545

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P V LG+ +M  FVL  NR LW PLY Y  R LRL
Sbjct: 546 PRVALGIGVMSLFVLGFNRLLWRPLYAYADRRLRL 580


>gi|291456097|ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT family
           [Bifidobacterium breve DSM 20213]
 gi|291382506|gb|EFE90024.1| ABC transporter, permease protein, NitT/TauT family
           [Bifidobacterium breve DSM 20213]
          Length = 596

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 246/574 (42%), Positives = 350/574 (60%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI  +   +   + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RIAADALVIAGILALFGLIAWILPAIGEPIGPKGVPS--SVSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTFVY T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + PR+L+E +RS RL+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+    
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD----RLFQPVGELF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +P     + +    S +LD+ +  VV   +     + +  I     +
Sbjct: 327 DTLTRPLGRTGGRWP-----VETKSTRSRVLDVLFMVVVVTASAFGVIELMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++ + + LG +T  RV +L I+ S+IW+PVG  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 DELGHALALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        +N N    LLM  GTQWYILFNVIAGAS  P+D +E+A SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G   
Sbjct: 502 WRELILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++GV +M  FV+A+NR  W+PL     R   L
Sbjct: 562 RTIIGVAVMSVFVVAVNRLFWNPLQRLAERRFAL 595


>gi|254181699|ref|ZP_04888296.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184212237|gb|EDU09280.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 577

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 275/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D ++ +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E S S R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|172065456|ref|YP_001816168.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171997698|gb|ACB68615.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 577

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 270/571 (47%), Positives = 373/571 (65%), Gaps = 12/571 (2%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DL+A ++V+G + +      +   P  +     I+L   +LP Y  RT  RM +A+
Sbjct: 18  PGWRDLVATLIVVGFLLLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTLRTVARMFAAL 77

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + S+ FTFV+AT AA+SRR   +L+P+LD +QS+PILG+L+FTV+ F++L+PG+++GAE 
Sbjct: 78  LASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSLFPGRILGAEC 137

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFAIFTSQ WNMTFS YQ+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN 
Sbjct: 138 AAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVPFAMPGLVWNA 197

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG+  + LPG+G+Y+A AI  +DL A+ +A++ M+  I LYD
Sbjct: 198 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMIVAIVLYD 257

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ WS +FR         + SW+L LF+++ ++            P+   + + 
Sbjct: 258 QLLFRPLVSWSERFRYGDAAPAIASRSWMLDLFQRSRWV-------ARASGPVRALLHRA 310

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R    +R   P    ++   +      D+ WF +        A++         T+ D+
Sbjct: 311 AR--ARLRGFTPAWRGRIALPRHTG---DVLWFAMCGAGCAYAAYELFRLGRTTLTWTDL 365

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V   G +T  RV VL+++AS++W+P+GI IG RP ++++IQP  Q LAAFPAN+ FP+
Sbjct: 366 RVVAAAGALTFARVTVLVMLASVLWVPIGISIGLRPDVAARIQPVTQFLAAFPANLLFPV 425

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +    L P++WL LLMI G QWY+LFNVIAGASAFP D +E A+ F +    WWR 
Sbjct: 426 AVFAIVRLRLAPDIWLCLLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPVTWWRR 485

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG+ PY+VTGAITA GGAWNASIV+E  SWG+  L   GLGAYIA  T+ G +P + 
Sbjct: 486 VMLPGVLPYFVTGAITASGGAWNASIVAEAVSWGNTRLNAGGLGAYIARMTDAGDYPRIA 545

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGV +M  FV+A NRF+W PLY +  R  RL
Sbjct: 546 LGVAVMSLFVIATNRFVWRPLYAFAERRTRL 576



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 85/263 (32%), Gaps = 4/263 (1%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                  L     + +   L +  F ++ G+        +              +     
Sbjct: 8   LRGGRWTLPAPGWRDLVATLIVVGFLLLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTL 67

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ R+   ++ +                    + P    L + P   +    V      
Sbjct: 68  RTVARMFAALLASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSL 127

Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L         +     W + F+        P D  E + SF ++ W+ +  + +P
Sbjct: 128 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVP 187

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V  A+ +  G W   + SE  + G++H+   G+GAY+A++        V   ++
Sbjct: 188 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 247

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
            M   ++  ++ L+ PL  +  R
Sbjct: 248 AMIVAIVLYDQLLFRPLVSWSER 270


>gi|300309875|ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300072660|gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 581

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 234/570 (41%), Positives = 339/570 (59%), Gaps = 8/570 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D L   ++ G++   LH  +   V  D  D + +      +P YA RT LRM  A  
Sbjct: 19  GWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFA 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SL F      LAAKSRR   +++P LDI+QS+P+LGFL+ TV  FM L+PG ++G E A
Sbjct: 79  FSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFT QVWNM F  Y S+  IP D++E + ++RL+ WQ+F  + +P S   L+WN M
Sbjct: 139 AIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MS  GGWFFV  SE I V +  + LPG+GSY+A AI + D  A L+A++ ML +I + DQ
Sbjct: 199 MSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L++RP++ W++KF++E T    P  SWV  L R +    ++    W    PL + + +  
Sbjct: 259 LVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCW---QPLGDWLAR-- 313

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                          ++   +    +L      ++   A+     +I  +    ++    
Sbjct: 314 ---HRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFG 370

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++WLG +TM RV+ + +IA++IW PVG+WIG +PHI+   QP AQ+ A+FP N+ FPLV
Sbjct: 371 HIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLV 430

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V      +++ N    LL+  GTQWYILFNVIAGA A PND KE A  + ++ W  W+ +
Sbjct: 431 VGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTL 490

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP IFP++VTGA TA GGAWNASIV+E+ASWG + L+  GLGAYI+  T+ G  P ++ 
Sbjct: 491 ILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIA 550

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + +M  FV+ +N+F+W  LY +  R  RL
Sbjct: 551 SIGVMSMFVVLMNKFVWRRLYAFAERRFRL 580


>gi|53718355|ref|YP_107341.1| putative transmembrane transporter [Burkholderia pseudomallei
           K96243]
 gi|167814398|ref|ZP_02446078.1| putative transmembrane transporter [Burkholderia pseudomallei 91]
 gi|52208769|emb|CAH34706.1| putative transmembrane transporter [Burkholderia pseudomallei
           K96243]
          Length = 577

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|126440929|ref|YP_001057811.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126220422|gb|ABN83928.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
          Length = 577

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 278/570 (48%), Positives = 367/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPIAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|167822873|ref|ZP_02454344.1| putative transmembrane transporter [Burkholderia pseudomallei 9]
          Length = 577

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|217420095|ref|ZP_03451601.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|217397399|gb|EEC37415.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 577

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W       A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|134279659|ref|ZP_01766371.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|167901440|ref|ZP_02488645.1| putative transmembrane transporter [Burkholderia pseudomallei NCTC
           13177]
 gi|134248859|gb|EBA48941.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 577

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 276/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH      GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTRDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|167892962|ref|ZP_02480364.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
          Length = 577

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W       A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|226196748|ref|ZP_03792328.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931279|gb|EEH27286.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 577

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 276/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVI+GASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVISGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|126452920|ref|YP_001065052.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242317395|ref|ZP_04816411.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|126226562|gb|ABN90102.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242140634|gb|EES27036.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
          Length = 577

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|76811160|ref|YP_332348.1| putative transmembrane transporter [Burkholderia pseudomallei
           1710b]
 gi|76580613|gb|ABA50088.1| putative transmembrane transporter [Burkholderia pseudomallei
           1710b]
          Length = 576

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 18  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 77

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 78  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 137

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 138 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 197

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 198 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 257

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 258 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 317

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 318 VRLSTRGRAW------------AVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 365

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 366 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 425

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 426 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 485

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 486 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 545

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 546 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 575



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 11  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 70

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 71  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 131 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 191 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 250

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 251 AIALYDQLLFRPMVAWAHK 269


>gi|171914592|ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 582

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 235/570 (41%), Positives = 338/570 (59%), Gaps = 6/570 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              DL+  + ++G++  +LH  +   V  D     P+   V ++P YA RT LRM  A  
Sbjct: 18  GWVDLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMWMAFA 77

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SL+FTFV    AAK+R    V++P LD++QS+P+LGFL+ TV  FM L+PG + G E A
Sbjct: 78  CSLVFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFGVECA 137

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFAIFT QVWNMTF  Y SL  IP D+EE + ++ L+ WQ+F  + +P SM  L++N M
Sbjct: 138 CIFAIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLIFNSM 197

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MS  GGWFFV  SE I V +  I LPG+GSY+A A++  D  A L+A+  ML +I   DQ
Sbjct: 198 MSFGGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIILASDQ 257

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L++RP++ W++K+R+E T    P  SW+  L R+     +  +       PL + ++ L 
Sbjct: 258 LVWRPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHR----LEPLCDWIRHLT 313

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L  +    P++ + + S       L +  +  V          ++  + +H +   + 
Sbjct: 314 FRLTTVEPSRPQSRVPMGSLVVRGLGLVVLAW--VGSKCATGLVAAVVNVRDHVSPAQMG 371

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +   G  T+ RV+V+  +A++IW+PVG+WIG RP ++   QP AQ+ A+FP N+ FP V
Sbjct: 372 NIAMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFPFV 431

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V     +H+        LM  GTQWYILFNV+AGA A PND KE A ++ + GW  WR +
Sbjct: 432 VGFYVAWHIPMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWRTL 491

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP IFPY+VTGA TA GGAWNASIV+E+A+WG   L+  GLGA +AE+T +G  P ++ 
Sbjct: 492 ILPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVIIC 551

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + +M  FV+ +NR LW  LY    R  RL
Sbjct: 552 SIAMMSLFVVLMNRVLWRRLYRLAERRFRL 581


>gi|296115222|ref|ZP_06833863.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
 gi|295978323|gb|EFG85060.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
          Length = 573

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 286/577 (49%), Positives = 377/577 (65%), Gaps = 13/577 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P    R+ PN+FDL+  V+++G    L    +   VP        I LD   LP YA RT
Sbjct: 7   PTHGLRVRPNLFDLVGLVILMGFAVALATVGRHMLVPLSPATAQAIHLDPSWLPGYALRT 66

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T RM +A++ S++FTF YA  AAKSRR G +LVP+LDI+QS+PILGFLTFTVV+F+ L+P
Sbjct: 67  TFRMFAALLASVVFTFTYAVWAAKSRRAGQILVPVLDILQSVPILGFLTFTVVFFLGLFP 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G+++GAELAAIF IFTSQ WNM FSMYQSL  +P DLEE +R F L+ WQ+FW L VPF+
Sbjct: 127 GRMMGAELAAIFTIFTSQAWNMAFSMYQSLRTVPADLEEAARCFGLTAWQRFWRLEVPFA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P LVWN M+SMSGGWF VV SE I VG+T I LPGIGSY+  AI  +DLLAILYA++TM
Sbjct: 187 IPSLVWNAMISMSGGWFMVVYSETITVGNTDIALPGIGSYVGTAIAHRDLLAILYAIVTM 246

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           L VI  YDQLLFRP++ WS +F +E T G    D WVL L R+T+ LR    +     + 
Sbjct: 247 LAVILAYDQLLFRPLVAWSARFSIEDTQGEAAPDPWVLALLRRTSLLRRASDALGRALTF 306

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +                        +  +     MLDI W+  + G  + +  + + Y  
Sbjct: 307 IGW-------------LRIGRAPSDVTPSHMSGRMLDIAWWACLGGCTLVLGGKVLTYAA 353

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            HFT   V  V+ LG +T+ RV+V +++AS+IW+PVGIW+G     + + Q  AQ +AAF
Sbjct: 354 GHFTASQVFQVMGLGGLTLLRVLVTLLVASLIWVPVGIWLGLDARRARRAQFVAQFMAAF 413

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN+FFPL V  +  +HLN N+WL+ LM+ GTQWYILFN++AGAS++P D  E A +F +
Sbjct: 414 PANLFFPLFVLFIVRFHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPTDLLEAARNFQV 473

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G  WW  ++LPGI P+++TGAITA GGAWNA+I +E+ASWG   LR  GLGAYIA++T 
Sbjct: 474 RGTLWWMRVMLPGIVPFFITGAITASGGAWNAAIATEMASWGSTTLRAQGLGAYIAQATI 533

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            G+   V LG+++M  FVL  NR +W PL  Y  R  
Sbjct: 534 DGATDRVGLGMVVMSLFVLLFNRAVWRPLANYAARHF 570


>gi|254260499|ref|ZP_04951553.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254219188|gb|EET08572.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 577

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L      +               +  + W  +    A+      +       ++ D+ 
Sbjct: 319 VRLSTRGRAW------------AVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V   G +T+ RV+VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL 
Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +  + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR +
Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI PYYVTGAITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + L
Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV  M   V+A+NR +W PLY +  R  RL
Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|121535326|ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121306112|gb|EAX47041.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 580

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 234/570 (41%), Positives = 338/570 (59%), Gaps = 4/570 (0%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            + D+L    V  ++  +L+      +P    + + I+ D   LP YA R+ LRM  A  
Sbjct: 14  GLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLRMFIAYG 73

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SLLFTF+Y ++AAKSR    VLVP+LDI+QS+P+LGFL+ T+  F+ L+P  ++G ELA
Sbjct: 74  ASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSLLGVELA 133

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +IFAIFT Q WNMTFS Y SL  +P+DL+E +   RL+ WQ+F  L VPF+M  LVWN M
Sbjct: 134 SIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNSM 193

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MS  G WFF+ ASE I V +  I LPG+GS++A A+++ ++ A+ YA+LTM+ +I L DQ
Sbjct: 194 MSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVDQ 253

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L +RP++VWS KF++ERT  I  + S V  + ++  F+ +   +   FF P++  +    
Sbjct: 254 LFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRAVFVAW---AQKYFFGPITQLIDSAF 310

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                +          L     ++  +                +Q I  ++    +  ++
Sbjct: 311 NRCARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYVGQQTYQGI-LLIASMGFDKLV 369

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I LG  T+ RV    +I  +  +PVG+WIG  P +S   QP  Q+ A+FPAN+ +P V
Sbjct: 370 KIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKFFQPIVQVTASFPANMIYPFV 429

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V     Y +N  L   LLM+ GTQWYILFNVIAGA A P D KE ++ F ++GW+ WR +
Sbjct: 430 VVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPTDLKEASTVFKLSGWQKWRKL 489

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP IFP+ +TG ITA GGAWNASIVSE+ +W    L  TGLG +I + TE G +  ++ 
Sbjct: 490 ILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNATGLGNFIGQVTEAGDWSGILG 549

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G+++MC FV+ +NR  W  LY        L
Sbjct: 550 GIIVMCAFVIIINRLFWRRLYHLAETKYHL 579


>gi|296137104|ref|YP_003644346.1| binding-protein-dependent transport systems inner membrane
           component [Thiomonas intermedia K12]
 gi|294341397|emb|CAZ89814.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
 gi|295797226|gb|ADG32016.1| binding-protein-dependent transport systems inner membrane
           component [Thiomonas intermedia K12]
          Length = 570

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 254/572 (44%), Positives = 361/572 (63%), Gaps = 14/572 (2%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            PN  DL+A  LVIG++ I+ H  ++  VP  + + V ++L    LP+YA  T LRML+A
Sbjct: 12  LPNRRDLIALPLVIGMLLIIGHASRQMAVPFHLGETVALSLKPADLPEYALYTVLRMLAA 71

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +  S +FT +YA +AA +R    ++VP+LD++QS+PILG+L+ TV  F+ L+PG ++G +
Sbjct: 72  LAASTVFTLIYAWIAANNRYAEKIMVPLLDVLQSVPILGYLSITVTGFIALFPGSMLGLQ 131

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A IFA+FTSQ WNMTFS+YQSL  +PRDL E +  +RL+ WQ+FW L +P++ PGL+WN
Sbjct: 132 FAVIFAVFTSQAWNMTFSLYQSLKTVPRDLTEAATLYRLNAWQRFWKLELPYAAPGLLWN 191

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMSMSGGWFFVVA+E + V    + +PGIGSYIA AI  ++L AI +A+L M  VI  Y
Sbjct: 192 AMMSMSGGWFFVVAAEALTVAGQQVSVPGIGSYIAAAIAAKNLGAIGWAILAMALVILSY 251

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           D LLFRP++ W++KFRL+ T  +    S VL   R+T   + +       +      +  
Sbjct: 252 DFLLFRPIVAWADKFRLDNTVSVDAPRSVVLDFLRRTRLTQRLARLPAVLWEMSVRLL-- 309

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
                       P   L     +  S   D  +   +    +G+       +   F +  
Sbjct: 310 ------------PAVPLHKSPQRAPSVWGDRVFVVSMVLFTLGLIVALFLVLPRDFGWLQ 357

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V +V+ LG  T  +V VL+ I+++IW+PVGIW+G RP  ++  QP AQ LAAFPAN+ FP
Sbjct: 358 VGHVMLLGAFTALKVFVLVAISALIWVPVGIWVGLRPRWAAVAQPVAQFLAAFPANLLFP 417

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LVV  + ++HLN N++ + LMI G+QWY+LF+VI  ASA P+D +E   +  + GW  WR
Sbjct: 418 LVVVAIVHWHLNVNVFTAPLMILGSQWYVLFSVIGAASALPSDLREAGRNLGLRGWLLWR 477

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP +FP +VTGA+TA GGAWNASIV+EV SWG   L  TGLGAYI E+T++G   +V
Sbjct: 478 KLYLPAVFPGFVTGALTASGGAWNASIVAEVVSWGSHTLVATGLGAYITEATQQGQTLKV 537

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            LGV +M  +V+A+NR +WH LY      +RL
Sbjct: 538 GLGVGVMALYVIAINRLVWHRLYKIAATRVRL 569


>gi|326403633|ref|YP_004283715.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325050495|dbj|BAJ80833.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 577

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 279/577 (48%), Positives = 375/577 (64%), Gaps = 10/577 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  R  PN +D+ A  LV  ++  + H  Q T  P   +    I L+   LP YA R
Sbjct: 7   PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM +A+++SL FTF  ATLAAKSRR  ++++PILDI+QSIPILGF++FTV++F++L+
Sbjct: 67  TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ +GAELA +F IFTSQ WNM FS YQSL   P DL E  RSF L+ WQ+FW L VPF
Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PGLVWN M+SMSGGWFFVVASE I VG T   LPGIGSY+A+A++ +D  AI+YA+L 
Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI LYDQLLFRP++ WS KFR E        + WVL           +   ++   +
Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVL----------RLLRRTFLLRA 296

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
                  +    + +        F     ++    + D  ++ VV   A   A Q + + 
Sbjct: 297 AGDWLSDQFAHVVRLRLGRADRKFGSAGLDRATGRIGDAAFYAVVIIAAGAAAAQVVEFC 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                + D+   + L   T+ RV+  ++I+ +IW+PVG+W+GFRP  +  +QP AQ LAA
Sbjct: 357 ARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLAA 416

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F 
Sbjct: 417 FPANLVFPVVVAGIVHFRLTPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNFR 476

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++G  WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH  L   GLGAYIA++T
Sbjct: 477 LSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQAT 536

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             G+   +VLGV +M  FVL  NR +W PLY Y +R 
Sbjct: 537 MAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASRR 573


>gi|86605760|ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86554302|gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus
           sp. JA-3-3Ab]
          Length = 575

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 248/581 (42%), Positives = 347/581 (59%), Gaps = 12/581 (2%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYAS 66
            P + RR+     D    +  + ++ ++      T        +VP I LD  +LP YA+
Sbjct: 6   SPEVLRRLPAGAADGAIILGTLVLLGLVAQVGAGTFERFQPPAVVPHIDLDPRNLPYYAA 65

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R+TLRM  A+  S LFT +Y  +AAKSR    +L+P+LDI+QS+P+LGFL+ TV  F+ L
Sbjct: 66  RSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDILQSVPVLGFLSITVTGFIAL 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +PG ++G E A+IFAIFTSQVWNMTFS YQSL  +P++L E    +RLSGWQ+F  L VP
Sbjct: 126 FPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAVTLYRLSGWQRFVQLEVP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +M GL+WN MMS  GGWFFV ASE I V +    LPG+GSY+  A++ +DL  + +A+L
Sbjct: 186 AAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALL 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           TM  VI L DQL +RP++ WS+KFRLE++ G    +SW+  L       R IG    N+ 
Sbjct: 246 TMAVVILLVDQLFWRPLVAWSDKFRLEQSAGAAAPESWLYDLLTTARIPRLIG----NWL 301

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P      +L   L  +R+  P N     + +R   +L    +  + G+ I I +    +
Sbjct: 302 APSRELADRLLSHLTRLRWGDPPN---PEAERRRERLLTQLSWAAIAGIGIWIVY----F 354

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +     + +VL    LG +T+ RV VL++ A++IW P+G+ IGF P ++  +QP  Q LA
Sbjct: 355 VTTTVGFGEVLLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPGLAKLLQPVVQFLA 414

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN  FP          ++      LLM  G QWYILFN IAGA + P D +E+A   
Sbjct: 415 AFPANFLFPFATLFFIRTQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDV 474

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GW+ W+ +I+PGIF  +VTG ITA GGAWNASIVSE+ +WG   L+ TGLG YIAE+
Sbjct: 475 GLRGWQRWQKLIIPGIFSAWVTGGITASGGAWNASIVSEIVAWGSTTLKATGLGTYIAEA 534

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           T  G +P + LG+ +M  FV+ +NR  W  LY        L
Sbjct: 535 TAVGDWPRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL 575


>gi|148260439|ref|YP_001234566.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|146402120|gb|ABQ30647.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
          Length = 577

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 279/577 (48%), Positives = 375/577 (64%), Gaps = 10/577 (1%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  R  PN +D+ A  LV  ++  + H  Q T  P   +    I L+   LP YA R
Sbjct: 7   PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TTLRM +A+++SL FTF  ATLAAKSRR  ++++PILDI+QSIPILGF++FTV++F++L+
Sbjct: 67  TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           PG+ +GAELA +F IFTSQ WNM FS YQSL   P DL E  RSF L+ WQ+FW L VPF
Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PGLVWN M+SMSGGWFFVVASE I VG T   LPGIGSY+A+A++ +D  AI+YA+L 
Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ML VI LYDQLLFRP++ WS KFR E        + WVL           +   ++   +
Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVL----------RLLRRTFLLRA 296

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
                  +    + +        F     ++    + D  ++ VV   A   A Q + + 
Sbjct: 297 AGDWLSDQFAHVVRLRLGRADRKFGSAGLDRATGRIGDAAFYAVVIIAAGAAAAQVVEFC 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                + D+   + L   T+ RV+  ++I+ +IW+PVG+W+GFRP  +  +QP AQ LAA
Sbjct: 357 ARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLAA 416

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F 
Sbjct: 417 FPANLVFPVVVAGIVHFRLAPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNFR 476

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++G  WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH  L   GLGAYIA++T
Sbjct: 477 LSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQAT 536

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             G+   +VLGV +M  FVL  NR +W PLY Y +R 
Sbjct: 537 MAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASRR 573


>gi|311063794|ref|YP_003970519.1| ABC transporter permease [Bifidobacterium bifidum PRL2010]
 gi|310866113|gb|ADP35482.1| Permease protein of ABC transporter system [Bifidobacterium bifidum
           PRL2010]
          Length = 593

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 239/575 (41%), Positives = 350/575 (60%), Gaps = 13/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +     ++ D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            L D LL++P+  W+ KFR+ +   +    S VL + R++     +         P++N 
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG----RPIANL 324

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  L R LG     +P    +          LDI +  ++    +   W  + +I +   
Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS  +QP  Q+LA+FP+N 
Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFPSNF 437

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+   +
Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  G  
Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + ++GV +M  FV+ +NR  W PL  Y  R   +
Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQTYAERRFSV 592


>gi|39998041|ref|NP_953992.1| ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39984986|gb|AAR36342.1| ABC transporter, permease protein [Geobacter sulfurreducens PCA]
          Length = 538

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 267/538 (49%), Positives = 351/538 (65%), Gaps = 12/538 (2%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           +  ++LD   LP YA RT +RM +A+ +SL FT  Y TLAAKSRRL  +LVP LDI+QS+
Sbjct: 11  VPSLSLDPRHLPYYALRTVIRMGAALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSV 70

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           PILGFL+ TV  F+ L+PG ++G E A+IFAIFTSQ WNM FS YQSL  IPRDL E + 
Sbjct: 71  PILGFLSVTVTGFIALFPGSLMGVEAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAAT 130

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
            F LSGWQ+FW +  PF++P LVWN+MMS+SGGWFFVVASE I VG T + LPGIGSY+A
Sbjct: 131 LFGLSGWQRFWRVEAPFAVPPLVWNIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVA 190

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR 290
           LAI  QD+ AI +A+ TML VI LYDQL FRP++ W+ KFR+E +      +SW L LF 
Sbjct: 191 LAIHRQDMGAIAWALATMLAVILLYDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFA 250

Query: 291 KTNFL-RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           +T FL R +  +            ++     G  R             +  + ++D  W 
Sbjct: 251 RTRFLARALSLAGALPELLTERLPRRRRPRTGEHRHR----------GRPAARIMDRIWN 300

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 A+   W+   ++ +   + ++L V  LG  TM RV VL+I+AS+ W+P+G+ IG
Sbjct: 301 AAFAVAALWALWKLARFV-SVIPFGEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIG 359

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P  ++++QP AQ LAAFPAN+ FP  V  +  + LNP +W + LMI GTQWYILFNVI
Sbjct: 360 LNPRWTTRVQPVAQFLAAFPANLLFPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVI 419

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AGASA PND +E A++  ++GW  WR ++LPGIFP  +TG +TA GG WNASIV+EV SW
Sbjct: 420 AGASAIPNDLREAAANLGLSGWELWRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSW 479

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G   L  TGLG+ IA  TE+G +P +VLG+ +M  +V+ LNRF W  LYL      RL
Sbjct: 480 GPTTLTATGLGSAIARWTEQGDYPHIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 537


>gi|310286892|ref|YP_003938150.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
 gi|309250828|gb|ADO52576.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
          Length = 593

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 238/575 (41%), Positives = 350/575 (60%), Gaps = 13/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +     ++ D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            L D LL++P+  W+ KFR+ +   +    S VL + R++     +         P+++ 
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG----RPIADL 324

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  L R LG     +P    +          LDI +  ++    +   W  + +I +   
Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS  +QP  Q+LA+FP+N 
Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFPSNF 437

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+   +
Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  G  
Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + ++GV +M  FV+ +NR  W PL  Y  R   +
Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 592


>gi|224282450|ref|ZP_03645772.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium bifidum NCIMB 41171]
          Length = 593

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 238/575 (41%), Positives = 349/575 (60%), Gaps = 13/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +     ++ D+H LP YA R+  RM
Sbjct: 31  RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 89  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            L D LL++P+  W+ KFR+ +   +    S VL + R++     +         P+++ 
Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG----RPIADL 324

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  L R LG     +P    +          LDI +  ++    +   W  + +I +   
Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS   QP  Q+LA+FP+N 
Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFPSNF 437

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+   +
Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  G  
Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + ++GV +M  FV+ +NR  W PL  Y  R   +
Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 592


>gi|330994257|ref|ZP_08318185.1| Glycine betaine/L-proline transport system permease protein proW
           [Gluconacetobacter sp. SXCC-1]
 gi|329758724|gb|EGG75240.1| Glycine betaine/L-proline transport system permease protein proW
           [Gluconacetobacter sp. SXCC-1]
          Length = 572

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 281/572 (49%), Positives = 379/572 (66%), Gaps = 13/572 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN+ DLL  + ++    ++    +   VP    +   I L    LP YA RTTLRM 
Sbjct: 11  RVRPNLADLLGLLAIMAGAAVIATAGRHMLVPIPASETGTIHLSPAWLPAYAVRTTLRMF 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+  SL+FTF YA  AAKSRR   VL+P+LDI+QS+PILGFLTFTVV+F+ L+PG+++G
Sbjct: 71  AALAASLVFTFTYAVWAAKSRRAAQVLIPLLDILQSVPILGFLTFTVVFFLGLFPGRMMG 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AELAAIF IFTSQ WNM F+MYQ+L  +P DLEE +R F L+ WQ+FW L VPF++P LV
Sbjct: 131 AELAAIFTIFTSQAWNMAFAMYQALRTVPPDLEEAARCFGLTPWQRFWRLEVPFAIPSLV 190

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN M+SMSGGWF VV SE I VG T I LPGIGSY+ +AI+++++ AI YA++ ML VI 
Sbjct: 191 WNTMISMSGGWFMVVYSETITVGSTDIALPGIGSYVGVAIEQRNIGAIFYAIIAMLAVIT 250

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           +YDQLLFRP++ WS +F  +    +   D WVL L R+T+ LR       +  + +   +
Sbjct: 251 IYDQLLFRPLVAWSARFSTDDGATMAAPDPWVLTLLRRTHLLRQFCLRLGDTMTRIG-WL 309

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R    +R   P            S ++D  W   +   A+ I W++  Y  +H++ 
Sbjct: 310 AIGPRPSQPVRAIIP------------SRLMDGAWGMALAVCALTIGWKTWTYGSSHYSV 357

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             VL+V+ LG IT+ RV+  +I+AS++W+P+GIW+G  P  +   Q  AQ +AAFPAN+F
Sbjct: 358 AQVLHVVMLGGITLLRVMGTVIVASLVWVPLGIWLGLSPRRARHAQMAAQFMAAFPANLF 417

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FPL+V  + ++HLN N+WL+ LM+ GTQWYILFN++AGAS++P D  E A +FH+ GW W
Sbjct: 418 FPLMVIGIVHWHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPGDLLEAARNFHVRGWLW 477

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR I+LPGI PY++TGA+TA GGAWNA+I +EVASWG   L   GLGAYIA +T  G+  
Sbjct: 478 WRRIMLPGIMPYFITGALTASGGAWNAAIATEVASWGDTTLSAQGLGAYIAHATVAGATD 537

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            V LG+ IM  FVL LNR LW PL  Y  R  
Sbjct: 538 RVGLGMAIMAGFVLLLNRVLWRPLANYAARHY 569


>gi|255019932|ref|ZP_05292006.1| binding-protein-dependent transport systems inner membrane
           component [Acidithiobacillus caldus ATCC 51756]
 gi|254970591|gb|EET28079.1| binding-protein-dependent transport systems inner membrane
           component [Acidithiobacillus caldus ATCC 51756]
          Length = 572

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 252/570 (44%), Positives = 364/570 (63%), Gaps = 14/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N  D++   L++    +L H  ++ +VP  + + +PI+    +L   A  TTLRML+A+ 
Sbjct: 16  NRQDIVFLPLLVLGFFVLAHATRQMSVPFTLGEALPISTRPSALVDDALYTTLRMLAAVA 75

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            SL+FT  Y  LAAK+R  G +L+P+LDI+QS+PILG+L+ TV  F+ L+PG +IG +LA
Sbjct: 76  ASLIFTIFYGLLAAKNRYAGKILIPLLDILQSVPILGYLSITVTGFIALFPGSLIGVQLA 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +FA+FTSQVWNMTF+ YQ+L  +P+DL+E +R +RL+ WQ+F+ L +PF++P L+WN M
Sbjct: 136 VVFAVFTSQVWNMTFAFYQALITLPKDLDEAARLYRLNAWQRFFRLELPFAVPPLLWNTM 195

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MSMSGGWFFVVA+E I V    + +PGIGSYIA+AI +++L A+ +A+L ML VI LYD 
Sbjct: 196 MSMSGGWFFVVAAEAITVAGHEVMVPGIGSYIAMAIAQKNLAAVFWAILAMLLVIGLYDF 255

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRP++ W++KF+LE    +    SWVL   R++   + +       +      +    
Sbjct: 256 LLFRPVVAWADKFKLETGADLQRPRSWVLDFLRRSRLAQAVAMVPAELWEFSLRIL---- 311

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                     P         ++     D+ +  +V GV +   WQ    +   F    ++
Sbjct: 312 ----------PPGRPHWVGEEKRRPWADVLFLLLVGGVLVYGFWQLYATLARSFDLTTLV 361

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +V++LG +T  RV+VL+ ++ +IW+PVGI +G RP +S +IQ   Q LAAFPAN+ FP+V
Sbjct: 362 HVLFLGLVTGLRVMVLVALSLLIWVPVGILVGLRPGLSGRIQAAIQFLAAFPANLLFPMV 421

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + ++HLN N+W+S LMI G+QWY+LFNVI  A+A P D KE A +  + GW  W+ +
Sbjct: 422 VLAILHWHLNVNIWVSPLMILGSQWYVLFNVIGAAAALPADLKEAARNLGLRGWLLWKRL 481

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG FP  VTG ITA GGAWNASIV+EV SWG+  L  TGLGAYI  +T  G+   V L
Sbjct: 482 LLPGTFPGTVTGGITASGGAWNASIVAEVVSWGNHTLVATGLGAYITLATAAGNLNAVAL 541

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G+ +M  +V+ +NR  W  LY    R LRL
Sbjct: 542 GIGVMSFYVVVVNRLFWRRLYDLAARRLRL 571


>gi|283782843|ref|YP_003373597.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298253320|ref|ZP_06977112.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis 5-1]
 gi|283442170|gb|ADB14636.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297532715|gb|EFH71601.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis 5-1]
          Length = 582

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 230/576 (39%), Positives = 339/576 (58%), Gaps = 13/576 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R + +I   +  + V G+   L+  I +   P  I     ++ D+ +LP Y  R+  R
Sbjct: 19  NTRFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPSK--VSTDLINLPYYTLRSVFR 76

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML A+V SL+FT VY +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG +
Sbjct: 77  MLIALVASLIFTIVYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  
Sbjct: 137 LGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E  L  I +A+++M+ V
Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIV 256

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           +   D  L++P+  W+ +FR+ ++       S +L L R ++    I       F P+  
Sbjct: 257 VLALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIRE 312

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            ++K+ R  G     +P    Q         + D  +  ++  +    A   + ++    
Sbjct: 313 WLEKVTRPFGRTGSKWPHKAAQ-------HKLGDWVFNVIMLIIVAAGAAHMLYFVYTTA 365

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              + +    LG IT  RV  LI+I+S+IW+PVG+ IG  P IS  +QP  Q+LA+FPAN
Sbjct: 366 GLHEFITAGMLGGITFMRVAALILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPAN 425

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             FP  ++    +H++      +LM  GTQWYILFNVIAGASA P+D +E+  SF +   
Sbjct: 426 FIFPFAMAWFMSWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRT 485

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             W+ +ILP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G 
Sbjct: 486 LRWKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGD 545

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               ++GV +M   V+  NR  W P+     +   L
Sbjct: 546 SARTLVGVTVMSLIVVLSNRLFWSPMQRISEKRYVL 581


>gi|308235357|ref|ZP_07666094.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311115105|ref|YP_003986326.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
 gi|310946599|gb|ADP39303.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 582

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 232/576 (40%), Positives = 348/576 (60%), Gaps = 13/576 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R + +I   +  + + G+   LL  I +   P+ I     ++ D+ +LP Y  R+  R
Sbjct: 19  NTRFWSDIIVCVGIIALFGVSAFLLQRINQPIGPKGIPS--AVSTDLINLPYYTLRSVFR 76

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M+ A++ SL+FT +Y +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG +
Sbjct: 77  MMLALIASLIFTIIYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  
Sbjct: 137 MGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A +  E  L  I +A+L+M+ V
Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGVGSFVAQSAAENKLGNIWWAILSMIVV 256

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           +   D  L++P+  W+ +FR+ ++       S VL L R ++    I       FSP+  
Sbjct: 257 VLAIDFFLWKPLTAWAERFRITQSASDEERKSAVLTLIRHSHADEVIS----KLFSPIRE 312

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            ++ + R  G     +P    Q         + D+ +  V+  + +G+A Q + ++    
Sbjct: 313 WLEIITRPFGRTGSQWPRKASQ-------RKLGDLVFNIVMAVLILGLAAQMLYFVATRT 365

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             Q+      LG +T  RV VLI ++S+IW+PVG++IG  P IS  +QP  Q+LA+FPAN
Sbjct: 366 GLQEFATAGALGALTFARVAVLIFVSSLIWVPVGVYIGMNPKISRIMQPVVQILASFPAN 425

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             FP  +     +H++      +LM  GTQWYILFNVIAGASA P+D +E+A SF +   
Sbjct: 426 FVFPFAMMWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMARSFRLNRM 485

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             W+ ++LP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G 
Sbjct: 486 LKWKTLVLPAIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMATQGLGAYITNATTVGD 545

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             + ++GV +M   V+  NR  W PL  Y  +   L
Sbjct: 546 SVKTLVGVTVMSLIVVLSNRLFWTPLQRYSAKRFVL 581


>gi|297242881|ref|ZP_06926819.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis AMD]
 gi|296889092|gb|EFH27826.1| ABC-type anion transporter, duplicated permease component
           [Gardnerella vaginalis AMD]
          Length = 582

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 230/576 (39%), Positives = 340/576 (59%), Gaps = 13/576 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R + +I   +  + V G+   L+  I +   P  I     ++ D+ +LP Y  R+  R
Sbjct: 19  NTRFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPSK--VSTDLINLPYYTLRSVFR 76

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ML A+V SL+FT VY ++AA+SRRLG VL+P+LDI+QS+PILGFL+ TV  ++ ++PG +
Sbjct: 77  MLIALVASLIFTIVYGSIAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E  RS +L+ WQ+FW L +P +M  
Sbjct: 137 LGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E  L  I +A+++M+ V
Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIV 256

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           +   D  L++P+  W+ +FR+ ++       S +L L R ++    I       F P+  
Sbjct: 257 VLALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIRE 312

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            ++K+ R  G     +P    Q         + D  +  ++  +    A   + ++    
Sbjct: 313 WLEKVTRPFGRTGSKWPHKAAQ-------HKLGDWVFNVIMLIIVAAGAAHMLYFVYTTA 365

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              + +    LG IT  RV VLI+I+S+IW+PVG+ IG  P IS  +QP  Q+LA+FPAN
Sbjct: 366 GLHEFITAGMLGGITFIRVAVLILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPAN 425

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             FP  ++    +H++      +LM  GTQWYILFNVIAGASA P+D +E+  SF +   
Sbjct: 426 FIFPFAMAWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRT 485

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             W+ +ILP IF  + TG ITA GGAWNASIVSE+  +G  H+ T GLGAYI  +T  G 
Sbjct: 486 LRWKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGD 545

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               ++GV +M   V+  NR  W P+     +   L
Sbjct: 546 SARTLVGVTVMSLIVVLSNRLFWSPMQRISEKRYVL 581


>gi|213691332|ref|YP_002321918.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522793|gb|ACJ51540.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 594

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 238/574 (41%), Positives = 344/574 (59%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RML
Sbjct: 31  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRML 88

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 89  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 148

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 149 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 209 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 268

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+ +  
Sbjct: 269 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 324

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +          S  LD+ +  +V         Q +  I     +
Sbjct: 325 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 379

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 380 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 439

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 440 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 499

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 500 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 559

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++GV +M  FV+A+NR  W+PL     R   L
Sbjct: 560 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 593


>gi|317482033|ref|ZP_07941058.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|291517374|emb|CBK70990.1| ABC-type anion transport system, duplicated permease component
           [Bifidobacterium longum subsp. longum F8]
 gi|316916600|gb|EFV37997.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 596

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 237/574 (41%), Positives = 343/574 (59%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RLASDVLVAAGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVDDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +          S  LD+ +  +V         Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L +  S+IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLACSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++GV +M  FV+A+NR  W+PL     R   L
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 595


>gi|320457401|dbj|BAJ68022.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 596

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 238/574 (41%), Positives = 344/574 (59%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RML
Sbjct: 33  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRML 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++TM+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +          S  LD+ +  +V         Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++GV +M  FV+A+NR  W+PL     R   L
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 595


>gi|313139598|ref|ZP_07801791.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132108|gb|EFR49725.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB
           41171]
          Length = 570

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 238/575 (41%), Positives = 349/575 (60%), Gaps = 13/575 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI  ++      + + G++  LL  I E   P  +     ++ D+H LP YA R+  RM
Sbjct: 8   RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ +SL+F+F+Y   AA+ RRL MVL+P+LDI+QS+PILGFL+ TV  +M L+PG ++
Sbjct: 66  FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM  L
Sbjct: 126 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 185

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN MMS+ GGWFF+ ASEMI V +    LPG+GS++A+A + + L  +L+A++TM+ V+
Sbjct: 186 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 245

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            L D LL++P+  W+ KFR+ +   +    S VL + R++     +         P+++ 
Sbjct: 246 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG----RPIADL 301

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  L R LG     +P    +          LDI +  ++    +   W  + +I +   
Sbjct: 302 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 354

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + +V + + LG IT  RV +L ++ SIIW+P+G+ IG  P IS   QP  Q+LA+FP+N 
Sbjct: 355 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFPSNF 414

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V      +H++ +    LLM  GTQWYILFNVIAGASA P+D +E   +FH+   +
Sbjct: 415 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 474

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W  +ILP +F  + TG ITA GGAWNASIVSE+ ++GH  L   GLG YIA +T  G  
Sbjct: 475 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 534

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + ++GV +M  FV+ +NR  W PL  Y  R   +
Sbjct: 535 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 569


>gi|162147550|ref|YP_001602011.1| glycine betaine transport system permease [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545655|ref|YP_002277884.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786127|emb|CAP55709.1| putative glycine betaine transport system permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533332|gb|ACI53269.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
          Length = 575

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 286/581 (49%), Positives = 380/581 (65%), Gaps = 12/581 (2%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           LP   SR   PN+FDL A + ++G+  +L    +    P    +   I LD   LP YA 
Sbjct: 6   LPAPSSRPARPNVFDLAALLCIMGLAVVLGTAGRHMLAPISAPNAATIHLDPAWLPGYAV 65

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RTTLRM +A+  SL FTF YA  AAKS R G+VLVP+LD++QS+PILGFLTFTVV+FM L
Sbjct: 66  RTTLRMFAALGASLFFTFTYAVWAAKSPRAGLVLVPVLDVLQSVPILGFLTFTVVFFMGL 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +PG+++GAELAAIF IFTSQ WNM FSMYQSL  +P DL+EV+R F L+GWQKFW L VP
Sbjct: 126 FPGRILGAELAAIFTIFTSQAWNMAFSMYQSLRAVPPDLDEVARCFGLTGWQKFWRLEVP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           F++PGLVWN M+SMSGGWF VV SE I VG+T + LPGIGSY+  AI ++DL A+LYA++
Sbjct: 186 FAVPGLVWNAMISMSGGWFMVVYSETITVGNTNVLLPGIGSYVGTAIAQRDLWAVLYAIV 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            M+ VI  YDQL+FRP++ WS +F      G   +D W+L L R+T  LR I  +  +  
Sbjct: 246 AMMVVILAYDQLVFRPLVAWSGRFAATGIEGASASDPWLLVLLRRTALLRRITDAIGDGL 305

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +          L + R         L  +     + D+ W   +  ++ G AWQ   Y
Sbjct: 306 TAIGG--------LKLGRRPSDARRTPLVPD----RIRDVVWAVGLAMLSGGAAWQVWLY 353

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                +  + L+V+ LG +T+ RVV ++++AS+IW+P G+W+G  P  + + Q  AQ +A
Sbjct: 354 ARATISMAEFLHVVSLGGLTLARVVAMVLLASLIWVPAGVWLGLDPVRARRAQFIAQFMA 413

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFPAN+FFP+ V  + ++HL+ ++WL+ LMI GTQWYILFNV+AGA+++P D  EVA S 
Sbjct: 414 AFPANLFFPIFVLFIVHFHLSSDIWLTPLMILGTQWYILFNVVAGAASYPADLLEVARSL 473

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + G  WW  +ILPGI P+Y+TGAITA GGAWNA+I +EVASWG  HL   GLGAYIA +
Sbjct: 474 QVGGRLWWLRVILPGIVPFYITGAITASGGAWNAAIAAEVASWGDDHLSAHGLGAYIAHA 533

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           T  G    V LG+ +M  FVL  NR +W PL  Y  R   L
Sbjct: 534 TVAGDTAHVGLGMTVMAAFVLLFNRAVWRPLAEYARRHFTL 574


>gi|296453563|ref|YP_003660706.1| binding-protein-dependent transporter inner membrane component
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296182994|gb|ADG99875.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. longum JDM301]
          Length = 596

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 235/574 (40%), Positives = 341/574 (59%), Gaps = 11/574 (1%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+  ++      + + G+I  +L  I E   P+ +     ++ ++  LP YA R+  RM 
Sbjct: 33  RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRMF 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  SL+FTF+Y T AA+ RRL  VL+P+LDI+QS+PILGFL+ T+  +M L+PG ++G
Sbjct: 91  VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+IFAIFTSQ WNM FS  +SL + P +L+E +RS +L+ WQ+FW L VP +M  L+
Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A A  E++L AI +A++ M+ V+ 
Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVMMVLVVL 270

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L D LL++P+  W+ KFR+ ++       S VL + R+++    +       F P+ +  
Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 326

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R LG     +  +          S  LD  +  +V         Q +  I     +
Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDAVFTVLVLAACAFGLVQLMLVIHRDAGF 381

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++     LG +T  RV +L ++ S+IW+P+G  IG  P +S  +QP  Q+LA+FP+N  
Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP V        ++ N    LLM  GTQWYILFNVIAGAS  P+D +E+  SF +  W+ 
Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR +ILP +F  +VTG ITA GGAWNASIVSE+ S+G   L  +GLGAYIAE+TE G+  
Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++GV +M  FV+A+NR  W+PL         L
Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAEHRFAL 595


>gi|86607766|ref|YP_476528.1| taurine ABC transporter permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556308|gb|ABD01265.1| NitT/TauT family ABC transporter, permease protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
          Length = 575

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 246/576 (42%), Positives = 346/576 (60%), Gaps = 12/576 (2%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLR 71
           RR+     D    +  + ++ ++               +VP I LD  +LP YA+R+TLR
Sbjct: 11  RRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNLPYYAARSTLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  A+  S LFT +Y  +AAKSR    +L+P+LD++QS+P+LGFL+ TV  F+ L+PG +
Sbjct: 71  MFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVTGFIALFPGSL 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A+IFAIFTSQVWNMTFS YQSL  +P++L E +  +RLSGWQ+F  L VP +M G
Sbjct: 131 LGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFTQLEVPAAMVG 190

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN MMS  GGWFFV ASE I V +    LPG+GSY+  A++ +DL  + +A+LTM GV
Sbjct: 191 LIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAGV 250

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I L DQL +RP++ WS+KFRLE+++G    +SW+  L       R IG    ++ SPL+ 
Sbjct: 251 ILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIG----SWLSPLAE 306

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            V +L   L    +  P   L   + +R   +L       + G+ I I +    ++    
Sbjct: 307 LVDRLLSYLTRPHWVDP---LSPEAERRRERLLTQLSRAAIGGIGIWIVY----FVATTV 359

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + +V+    LG +T+ RV VL++ A++IW P+G+ IGF P ++  +QP  Q LAAFPAN
Sbjct: 360 GFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPKLAKLLQPVVQFLAAFPAN 419

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             FP          ++      LLM  G QWYILFN IAGA + P D +E+A    + GW
Sbjct: 420 FLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGW 479

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + WR +I+PGIF  +VTG +TA GGAWNASIVSE+ +WG   L  TGLG YIAE+T  G 
Sbjct: 480 QRWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGD 539

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +P + LG+ +M  FV+ +NR  W  LY        L
Sbjct: 540 WPRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL 575


>gi|302527762|ref|ZP_07280104.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. AA4]
 gi|302436657|gb|EFL08473.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. AA4]
          Length = 577

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 237/576 (41%), Positives = 334/576 (57%), Gaps = 13/576 (2%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR   ++   L     + +I  L HG      P        ++ D   LP YA R+ LR
Sbjct: 14  PRRTIADVAVFLGAAAALWLIVRLAHGAATAWTPATAPST--VSTDPAELPYYAGRSLLR 71

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  A+V+S+ FTF YAT AA+ RR   +L+P LDI+QS+P+LGFL+ T+  F+ L+PG  
Sbjct: 72  MFVALVLSVGFTFCYATAAARLRRTEKILLPALDILQSVPVLGFLSVTITGFIALFPGSQ 131

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E A+IFAIFTSQ WNMTF+ + SL + PRDL+E SR  RLS WQ+FW + VP  M  
Sbjct: 132 LGLECASIFAIFTSQAWNMTFAFHHSLVSQPRDLDEASRLLRLSRWQRFWRVDVPSGMIP 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LVWN MMS  GGWFF+ ASE + V +    LPGIG+Y+A A +E DL  +L A+  M+ +
Sbjct: 192 LVWNGMMSFGGGWFFLTASEALSVNNQKFALPGIGAYVATASEEGDLGKVLLAVGVMVVL 251

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           +   + L +RP+  WS +FR+E +       S VL L R++     +G        PL  
Sbjct: 252 VVGVNVLFWRPLTAWSERFRIENSEAAEAPRSLVLDLLRRSRIPTLLGRVLGKLVFPLDR 311

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +         +RF                   DI +  VV G+ +    + + +I    
Sbjct: 312 ALAVFGLAEYPLRFSPARR-----------RAADIVFSVVVFGLILYGTVRMVLFIGETT 360

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            Y ++ +V+ LG IT  RVV L+++ +++W+PVG+WIG  P +S   QP  Q+LA+FPAN
Sbjct: 361 GYGEIGHVLLLGLITFARVVALVVVGTLVWVPVGVWIGMNPRVSRLAQPVVQVLASFPAN 420

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             FPL+ + +    ++ +    LLM  G QWYILFNVIAGASA P+D +E +++  +   
Sbjct: 421 FLFPLITAVLLATGISLDWGGILLMSLGAQWYILFNVIAGASAIPHDLREASANLRLPRA 480

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            WWR ++LP +FP YVTG ITA GGAWNASIV+E+ S+  + L  TGLGAYIA++T  G 
Sbjct: 481 LWWRRLVLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVTLTATGLGAYIADATSTGD 540

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
              ++LGV +M  +V+ LNR  W  LY    R   L
Sbjct: 541 SGRILLGVAVMSLYVVGLNRLFWRRLYRLAERRFSL 576



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 14/266 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           Y +      RR    +F ++ F L++     ++  I ETT   +I  ++ + L       
Sbjct: 321 YPLRFSPARRRAADIVFSVVVFGLILYGTVRMVLFIGETTGYGEIGHVLLLGLI------ 374

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               T  R+++ +V+  L           + R+  +  P++ ++ S P            
Sbjct: 375 ----TFARVVALVVVGTLVWVPVGVWIGMNPRVSRLAQPVVQVLASFPANFLFPLITAVL 430

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +        G     I  +     W + F++      IP DL E S + RL     +  L
Sbjct: 431 LATGISLDWGG----ILLMSLGAQWYILFNVIAGASAIPHDLREASANLRLPRALWWRRL 486

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P   P  V   + +  G W   + +E++      +   G+G+YIA A    D   IL 
Sbjct: 487 VLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVTLTATGLGAYIADATSTGDSGRILL 546

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNK 269
            +  M   +   ++L +R +   + +
Sbjct: 547 GVAVMSLYVVGLNRLFWRRLYRLAER 572


>gi|317016935|gb|ADU86008.1| putative binding-protein-dependent transport systems inner membrane
           component [Dactylosporangium aurantiacum subsp.
           hamdenensis]
          Length = 584

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 219/582 (37%), Positives = 323/582 (55%), Gaps = 15/582 (2%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
            LP   ++  + +     A +++  ++  +  G   +  P+       I  +   LP YA
Sbjct: 17  RLPWLRTQFGWVDWVVAAAVLVLFYLVFRIAEGTTVSFTPQHPA----IDTNPARLPYYA 72

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R+ LRM  A+ +S +FTF YA  AA+SRRL  +L+P LDI+QS+P+L FLT  +   + 
Sbjct: 73  GRSLLRMFVALGVSTVFTFGYAYAAARSRRLEKILIPALDILQSVPVLAFLTVAIGALLA 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+P   IG ELA+IFAIFTSQ WNMTFS Y SL  +PRDL+E+SRS RL+ W +FW + V
Sbjct: 133 LFPHSFIGLELASIFAIFTSQAWNMTFSFYHSLITLPRDLDELSRSLRLTRWMRFWKIEV 192

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P    GL+WN MMS  GGWFF+VASE + V +    LPG+G+Y   AI + +L  +  A+
Sbjct: 193 PNGAIGLIWNGMMSFGGGWFFLVASEAVTVANAQYTLPGVGAYAGAAIAQGNLGHVFLAI 252

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
             M  ++   +   +RPM  W+ KF+ E++       S VL   R++++ + +  +    
Sbjct: 253 AAMAVMVIGVNFFFWRPMTAWAEKFKQEQSEATEVQRSVVLDFLRRSHWPQALAPAR--- 309

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              L+    +  R  G      P +  +  +        D+ +      +     +  + 
Sbjct: 310 -RKLAGWSARAGRVFGTDDRPLPVSHARRLA-------GDVVFAAATIALIGWGLYSLLR 361

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y+        V   + LG +T  RV+VL+++ +++W+P+G+ IG  P ++   QP  Q+L
Sbjct: 362 YLHGTAGLGVVAEPLLLGLLTPGRVIVLVVLTTLVWVPIGVRIGSSPRLARIAQPIVQIL 421

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           A+FPAN  FPL         L+ ++   LLM  G QWYILFN IAGA A P D +E   +
Sbjct: 422 ASFPANFLFPLATWLFVRTGLSIDIGGILLMGLGAQWYILFNTIAGAMAIPTDLREAMDN 481

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             + GWR WR +I+P IFPYYVTG ITA GGAWNASIV+EV  +    L   GLGAYIA+
Sbjct: 482 LGVHGWRRWRRLIIPAIFPYYVTGGITASGGAWNASIVAEVVGFAGTTLTAHGLGAYIAD 541

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ST  G++P ++ G+ +M  +V+ LNR  W  LY        L
Sbjct: 542 STATGNYPHLIAGIAVMSLYVVGLNRLFWRRLYRLAEARYSL 583


>gi|167626908|ref|YP_001677408.1| anion ABC transporter permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596909|gb|ABZ86907.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 601

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 236/562 (41%), Positives = 323/562 (57%), Gaps = 12/562 (2%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  + T    +     ++LD+  LP Y + T +RM   + ISLL TF +  LAAKS+R
Sbjct: 40  LGGSIDYTSQSSVQQYSEVSLDLWLLPYYTAETVMRMFIGLGISLLITFTFGALAAKSKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P +DI+QSIPILGF   TV  F+ L+P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQ+FW + VPFSMPGLVWN MMSMS  WF +VASE I+V
Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   QD  A+  A++ ML  I LYDQLLFRP++VWS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L        + SW L + +K+   +       +  S L N   +  +      ++ P +
Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVNI--RFFKKNLNKVYNQPRH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             Q      +  +L   +  ++       A+Q++    +     +   V   G +T FRV
Sbjct: 338 RKQEKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTGFRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + +  + V    LN N+
Sbjct: 398 VVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P++ K  A +  + G+  WR  + P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAESTEKG--SFPEVVLGVLIMCCF 565
           ITA GGAWNASIV E  +WG      ++ +GLG YI   T         V+LGV++MC  
Sbjct: 518 ITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVMCVL 577

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
           V+A N+  W  LY Y      +
Sbjct: 578 VVASNKLFWRRLYNYAENRFSM 599


>gi|254375266|ref|ZP_04990746.1| ABC-type anion transport system [Francisella novicida GA99-3548]
 gi|151572984|gb|EDN38638.1| ABC-type anion transport system [Francisella novicida GA99-3548]
          Length = 599

 Score =  455 bits (1170), Expect = e-125,   Method: Composition-based stats.
 Identities = 230/599 (38%), Positives = 340/599 (56%), Gaps = 16/599 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56
           +  +    +S ++    +D+LA  +++ I+++ +    +     D      ++    I+L
Sbjct: 1   MKRLYSTNMSAKVSRTKWDILALSIILLILSVFVWSTSDLGGSIDYKSQASVLKYSDISL 60

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
            +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+LGF 
Sbjct: 61  SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++LS 
Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231
           WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V         I LPGIGS+I  
Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L + +K
Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              ++          S + N   K  +      ++   +            +L      +
Sbjct: 301 AYVVKIFTTFLAKCSSKIVNI--KFFKKNLDKAYNQKVHKKADKHESVTKRILWNVIIIL 358

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +    +   +Q++         ++   V   G  T  RV VLI+I S+IW+P+GIWIG R
Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM  GTQWYILFNVIAG
Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           ASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+WNASI+SE  +WG 
Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538

Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
              ++ +G+G YI + T         V+LGV++MC  V+A N+  W  LY Y      +
Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597


>gi|134302641|ref|YP_001122610.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050418|gb|ABO47489.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 599

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 40  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 160 QSLKTVPKELREAADMYQLSSWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597


>gi|254372120|ref|ZP_04987613.1| hypothetical protein FTCG_01262 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569851|gb|EDN35505.1| hypothetical protein FTCG_01262 [Francisella novicida GA99-3549]
          Length = 599

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 340/599 (56%), Gaps = 16/599 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56
           +  +    +S ++    +D+LA  +++ I+++ +    +     D      ++    I+L
Sbjct: 1   MKRLYSTNMSAKVSRTKWDILALSIILLILSVFVWSTSDLGGSIDYKSQASVLKYSDISL 60

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
            +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+LGF 
Sbjct: 61  SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++LS 
Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231
           WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V         I LPGIGS+I  
Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L + +K
Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              ++          + + N   K  +      ++   +            +L      +
Sbjct: 301 AYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVHKKADKHESVTKRILWNVIIIL 358

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +    +   +Q++         ++   V   G  T  RV VLI+I S+IW+P+GIWIG R
Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM  GTQWYILFNVIAG
Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           ASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+WNASI+SE  +WG 
Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538

Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
              ++ +G+G YI + T         V+LGV++MC  V+A N+  W  LY Y      +
Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597


>gi|56707421|ref|YP_169317.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669892|ref|YP_666449.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456498|ref|ZP_03664971.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370883|ref|ZP_04986888.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254874257|ref|ZP_05246967.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603913|emb|CAG44898.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320225|emb|CAL08281.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569126|gb|EDN34780.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254840256|gb|EET18692.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158563|gb|ADA77954.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 599

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 40  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597


>gi|255524913|ref|ZP_05391861.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|255511391|gb|EET87683.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
          Length = 574

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 206/572 (36%), Positives = 330/572 (57%), Gaps = 14/572 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            + D++ F++++ I+ + +    +  V       + ++ D+ +LP Y  ++  RM +A +
Sbjct: 13  GVLDIIIFLVIVSILYLAIAPGIKGNV---NTSGIQVSTDIRNLPIYVLKSVGRMTAAYI 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +SL+FT +Y  +AA + +   V++PILDI+QSIP+L FL   V+  + L+P   IG EL+
Sbjct: 70  LSLIFTLIYGYIAAHNEKAEKVMMPILDILQSIPVLSFLPAVVLGLIALFPSHNIGLELS 129

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +I  IFT Q WNMTFS Y S+  +P+DLEE S  F L+ WQKF  L VPF++ GLVWN M
Sbjct: 130 SIILIFTGQAWNMTFSFYHSIKILPKDLEEASGVFGLNKWQKFKRLEVPFAVIGLVWNSM 189

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MS SGGWFF++A EM  +      L GIGS++  A  + D  A+   +  ++ VI L DQ
Sbjct: 190 MSWSGGWFFLMACEMFTLKGKDFRLEGIGSFLQTAASQGDKKALACGIAALIFVIVLLDQ 249

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L+++P+ VW++KF++E T       S+VL L R++  + F+       + P++ N+    
Sbjct: 250 LVWKPVTVWADKFKMELTESGEAPHSFVLTLLRRSVIVDFL---VKKIYEPIAENL---- 302

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHFTYQD 375
               + RF       +    + +     + W    ++ GV +   + +   ++   +  +
Sbjct: 303 -NEAIDRFVVKLASKEKTKEKGIGIGFIVRWIVRILIYGVLLYSGFNAFKLLMQ-LSKNE 360

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     +  RV    +IA I  +PVG+ IG    +++ +QP  Q++A+ PA   FP
Sbjct: 361 WGRILPSVGYSFLRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVASIPATALFP 420

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++          N+   +LM+ GTQWYILFNVIAGA A P D K  A +F I GW+ W+
Sbjct: 421 VILIYFMNKLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAAKTFGINGWKRWK 480

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP IFPY +TG +TA GG WNASIVSE  ++G   + T GLGA I+E+TEKG++P +
Sbjct: 481 VLILPSIFPYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALISEATEKGNYPLL 540

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++  +IMC  V+ +N+ LW  LY+      ++
Sbjct: 541 LIATIIMCVVVVGVNKTLWKRLYVLSEEKFKI 572


>gi|299135927|ref|ZP_07029111.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298602051|gb|EFI58205.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 590

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 232/568 (40%), Positives = 340/568 (59%), Gaps = 14/568 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVIS 79
           D+   +  + ++ +      E+ V     D++P I+LD  +LP YA+R+TLRM  A+  S
Sbjct: 35  DIAVGLGTLVLLYVAARVGAESLVKFSPPDVIPTISLDPRNLPNYAARSTLRMFIALGFS 94

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            LFTFVY   AA+SRR   VL+P+LDI+QS+P+LGFL+ TV  F+ ++ G ++G E A+I
Sbjct: 95  TLFTFVYGYAAARSRRAEKVLIPLLDILQSVPVLGFLSVTVTLFIAMFRGSLLGLEAASI 154

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FAIFT Q WNM FS YQSL  +P +++E+   + LS W++F  L +P S+ GLVWN MMS
Sbjct: 155 FAIFTGQAWNMAFSFYQSLRTVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGMMS 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GGWFF+ ASE I V +    LPG+GSY+A AI  +DL A+ +A++TM+ ++ L DQ  
Sbjct: 215 FGGGWFFLAASESISVLNRQYTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQFF 274

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
           ++P++  +++++LE + G      WV+ L+R  +               L      L R 
Sbjct: 275 WKPLVTIADRYKLELSAGEE-RRFWVVDLWRAASLPALFECILGPSLIRLDRLFSNLTRV 333

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
                   P            S   D  +  VV  +A+G+   ++ +I++     +V + 
Sbjct: 334 KPHPGHTSP------------SKTADRVFNVVVSLLALGMIVAAVRFILSSVGMAEVGHA 381

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
             LG  T  RV+ L++++++IW P+G+ IGF P ++   QP  Q+ A+FPAN  FP    
Sbjct: 382 ALLGLATGARVLALLVLSTLIWTPIGVAIGFNPRLARLSQPLVQICASFPANFLFPFATL 441

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 ++ N    LLM  G QWY+LFNVI GA + PND +E+A+S  + G+R W+++I 
Sbjct: 442 IFIRLGIHLNWGSMLLMALGAQWYLLFNVIGGAQSVPNDLREMATSIGLRGFRKWKFLIG 501

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P IF  +VTGAITA GGAWNASIV+E+ SWGH  LR  GLGAYIA++T  G +P +VLGV
Sbjct: 502 PSIFGSWVTGAITASGGAWNASIVAEIVSWGHTTLRAAGLGAYIADATSVGDWPRIVLGV 561

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +M  FV+ LNR LW PLY       +L
Sbjct: 562 SLMSVFVVTLNRILWKPLYRLAQTRFQL 589


>gi|89255582|ref|YP_512943.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314089|ref|YP_762812.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|169656490|ref|YP_001427591.2| ABC transporter membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254366983|ref|ZP_04983019.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|254368580|ref|ZP_04984596.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954416|ref|ZP_06559037.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312158|ref|ZP_06802964.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143413|emb|CAJ78586.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115128988|gb|ABI82175.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134252809|gb|EBA51903.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|157121483|gb|EDO65674.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551558|gb|ABU60635.2| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 599

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 231/599 (38%), Positives = 341/599 (56%), Gaps = 16/599 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56
           +  +    +S ++    +D+LA  +++ I++I +  I +     D      ++    I+L
Sbjct: 1   MKRLYSTNMSAKVSRTKWDILALSIILLILSIFVWSISDLGGSIDYKSQASVLKYSDISL 60

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
            +  LP Y + TT+RM   +VISLL TF++ T AAK++R   +++P++DI+QSIP+LGF 
Sbjct: 61  SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             TV  F+ ++P  + GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++LS 
Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231
           WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V         I LPGIGS+I  
Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF +        + SW L + +K
Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              ++          + + N   K  +      ++   +            +L      +
Sbjct: 301 AYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVHRKADKHESVTKRILWNVIIIL 358

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +    +   +Q++         ++   V   G  T  RV VLI+I S+IW+P+GIWIG R
Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+W  LLM  GTQWYILFNVIAG
Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           ASA P + K  A +  + G    +  ++P + PYYVTGAITA GG+WNASI+SE  +WG 
Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538

Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
              ++ +G+G YI + T         V+LGV++MC  V+A N+  W  LY Y      +
Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597


>gi|208779974|ref|ZP_03247317.1| ABC transporter, membrane protein [Francisella novicida FTG]
 gi|208743978|gb|EDZ90279.1| ABC transporter, membrane protein [Francisella novicida FTG]
          Length = 591

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 323/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L++  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 32  LGGSIDYKSQASVLKYSDISLNLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 92  AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 272 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 330 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589


>gi|118496755|ref|YP_897805.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. novicida U112]
 gi|118422661|gb|ABK89051.1| ABC-type anion transport system, duplicated permease component
           [Francisella novicida U112]
          Length = 599

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 40  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 280 VIGDNPSETYSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 338 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597


>gi|187932197|ref|YP_001892182.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187713106|gb|ACD31403.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 599

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 321/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 40  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q +         ++   V   G  T  RV
Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQIVYAKDKDIGIEETFKVFVYGLFTGVRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597


>gi|241667484|ref|ZP_04755062.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254876031|ref|ZP_05248741.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842052|gb|EET20466.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 601

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 235/562 (41%), Positives = 324/562 (57%), Gaps = 12/562 (2%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  + T    +     ++L++  LP Y + T +RM   + ISLL TF++  LAAKS+R
Sbjct: 40  LGGSIDYTNQASVQQYSEVSLNLWLLPYYTAETVMRMFIGLGISLLITFIFGALAAKSKR 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P +DI+QSIPILGF   TV  F+ L+P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQ+FW + VPFSMPGLVWN MMSMS  WF +VASE I+V
Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   QD  A+  A++ ML  I LYDQLLFRP++VWS KF
Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L        + SW L + +K+   +       +  S L N   +  +      ++ P +
Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVNI--RFFKKNLNKVYNQPRH 337

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             Q      +  +L   +  ++       A+Q++    +     +   V   G +T FRV
Sbjct: 338 RKQEKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTGFRV 397

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + +  + V    LN N+
Sbjct: 398 VVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLNFNI 457

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P++ K  A +  + G+  WR  + P + PYYVTGA
Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYVTGA 517

Query: 511 ITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAESTEKG--SFPEVVLGVLIMCCF 565
           ITA GGAWNASIV E  +WG      ++ +GLG YI   T         V+LGV++MC  
Sbjct: 518 ITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVMCVL 577

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
           V+A N+  W  LY Y      +
Sbjct: 578 VVASNKLFWRRLYNYAENRFSM 599


>gi|328675308|gb|AEB27983.1| ABC-type anion transport system, duplicated permease component
           [Francisella cf. novicida 3523]
          Length = 591

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 225/562 (40%), Positives = 325/562 (57%), Gaps = 14/562 (2%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   + ISLL TF++ T AAK++R
Sbjct: 32  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKR 91

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 92  AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEKF 271

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++        F++  SNN+  +      +   + + 
Sbjct: 272 VIGDNPSETYSKSWFLTILQKAYVVKIFT----RFWTKCSNNIVNINFFKKNLDKAYNQK 327

Query: 331 FLQLCSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             +        +  +L      ++    +   +Q++         ++   V   G  T  
Sbjct: 328 VHKKAEKHESTIKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGV 387

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV  LI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN 
Sbjct: 388 RVAALILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNF 447

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           ++W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVT
Sbjct: 448 DIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVT 507

Query: 509 GAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCF 565
           GAITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  
Sbjct: 508 GAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCIL 567

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
           V+A NR  W  LY Y      +
Sbjct: 568 VVASNRLFWRRLYNYAENRFSM 589


>gi|167010348|ref|ZP_02275279.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Francisella tularensis subsp. holarctica FSC200]
          Length = 591

 Score =  452 bits (1162), Expect = e-124,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 32  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 92  AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 272 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 330 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589


>gi|194324063|ref|ZP_03057838.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           novicida FTE]
 gi|194321960|gb|EDX19443.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 591

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G  +      ++    I+L +  LP Y + TT+RM   +VISLL TF++ T AAK++R
Sbjct: 32  LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +++P++DI+QSIP+LGF   TV  F+ ++P  + GA+ A IF I T+Q WNM  S Y
Sbjct: 92  AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           QSL  +P++L E +  ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V
Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211

Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
                    I LPGIGS+I  A   Q+  A+  A++TML  I LYDQLLFRP++ WS KF
Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            +        + SW L + +K   ++          + + N   K  +      ++   +
Sbjct: 272 VIGDNPSETYSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
                       +L      ++    +   +Q++         ++   V   G  T  RV
Sbjct: 330 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + +  + V  ++LN N+
Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W  LLM  GTQWYILFNVIAGASA P + K  A +  + G    +  ++P + PYYVTGA
Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509

Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567
           ITA GG+WNASI+SE  +WG    ++ +G+G YI + T         V+LGV++MC  V+
Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
           A N+  W  LY Y      +
Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589


>gi|118496766|ref|YP_897816.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. novicida U112]
 gi|194324074|ref|ZP_03057849.1| ABC transporter, permease protein [Francisella tularensis subsp.
           novicida FTE]
 gi|118422672|gb|ABK89062.1| ABC-type anion transport system, duplicated permease component
           [Francisella novicida U112]
 gi|194321971|gb|EDX19454.1| ABC transporter, permease protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 574

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 200/579 (34%), Positives = 314/579 (54%), Gaps = 13/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + ++ AILYA++ 
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I         
Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L N    L +    I    P   +++      +      W+ V+    +        + 
Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA
Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  SFH
Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T
Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 E  L V+ +C  V     F+W PLY       +
Sbjct: 534 ANNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572


>gi|296141005|ref|YP_003648248.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296029139|gb|ADG79909.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 588

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 233/581 (40%), Positives = 324/581 (55%), Gaps = 15/581 (2%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTT 69
             RR    + D+L       +I +++   Q    P D+      +  D  +LP YA+R+ 
Sbjct: 19  SGRRGAGIVADVLVVAGAAAMIWLVIRVGQGMDTPIDLQHADARVDTDPANLPYYAARSL 78

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM  A+  S++FTF YATLAA+SRR   VL+P+LD++QS+PILGFL+ TV  F+ L+PG
Sbjct: 79  LRMFLALGASIVFTFAYATLAARSRRARAVLMPLLDVLQSVPILGFLSITVTLFIALFPG 138

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +G ELAAIFAIFTSQ WNMTF+ YQSL + PRDL E +    LS WQ+FW L VP  M
Sbjct: 139 STLGLELAAIFAIFTSQAWNMTFAFYQSLISQPRDLGEAAEDIGLSRWQRFWRLDVPSGM 198

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             LVWN MMS  GGWFF+ ASE + V      LPGIG+Y+A A  + DL  + +A+ TM+
Sbjct: 199 IPLVWNAMMSFGGGWFFLTASEAVSVAGNEYALPGIGAYVASASADGDLGLVGWAIGTMI 258

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            VI   + L + P+  W+ +FRLE +       S VL + R+++     G       +  
Sbjct: 259 VVIIGVNFLFWSPLTAWAERFRLEDSATGREPKSVVLTVLRRSHAGEAFGRLMSPIVALT 318

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
                   R+                         D+ +  VV  V     W++   I++
Sbjct: 319 DRFFGVFGRSAPSHDVTPARR-----------RAGDLAFGIVVVAVVGYGLWRAAETILS 367

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                +V +V  LG  TM RV ++++ A+++W+P+G+ IG  P +S  +QP  Q+ A+FP
Sbjct: 368 TSGIAEVGHVFLLGLATMGRVALVMLFATVVWVPIGVIIGLNPKLSRALQPVIQVFASFP 427

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN  FPL+ + +   ++  +L   +LM  GTQWYILFNVIA ASA P D  E A    + 
Sbjct: 428 ANFLFPLITAVLIAGNIPLDLGGVVLMALGTQWYILFNVIAAASAIPGDLLEAADDMSLP 487

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W  WRY++LPG+F  YVTG ITA GGAWNASIV+EV S+        GLG YIA++T  
Sbjct: 488 RWMRWRYVLLPGVFAGYVTGGITAAGGAWNASIVAEVVSYDGQTYHAFGLGDYIADATAA 547

Query: 550 ---GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                   ++LG+ +MC FV+  N  LW  LY    R   L
Sbjct: 548 TGPAHTSNLLLGISVMCLFVVGTNALLWRRLYRVAERRYSL 588


>gi|254375277|ref|ZP_04990757.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548]
 gi|151572995|gb|EDN38649.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548]
          Length = 574

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 200/573 (34%), Positives = 311/573 (54%), Gaps = 13/573 (2%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRML 73
             PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+R++
Sbjct: 12  FLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDHSHLPYYMLRTTMRLI 71

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  ++G
Sbjct: 72  IGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMG 131

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+SMPGL+
Sbjct: 132 LEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSMPGLL 191

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + +++AI YA+  ++  I 
Sbjct: 192 WNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALAAIIINIV 251

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
           L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I          L N  
Sbjct: 252 LFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLINGA 311

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L +    I    P   +++           I W+ V+    I        +    F  
Sbjct: 312 SFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISTCIWAGNALWHF----FPD 359

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D  Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA P  +F
Sbjct: 360 GDKSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF 419

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  SFH+ GW+W
Sbjct: 420 FPIVAVLILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFHLKGWKW 479

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T      
Sbjct: 480 WFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLH 539

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           E  L V+ +C  V     F+W PLY       +
Sbjct: 540 EAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572


>gi|303232762|ref|ZP_07319447.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302481248|gb|EFL44323.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 582

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 220/577 (38%), Positives = 337/577 (58%), Gaps = 13/577 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
              + R++ +I   +    + G+   LL    +   P+ I     ++ D+ +LP Y  R+
Sbjct: 16  ARTATRVWSDIVVCVGIFALFGLTAFLLQCTTQPIGPQGIPST--VSTDIVNLPYYTLRS 73

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             RM  A++ SL+FT +Y +LAA S  LG +L+P+LDI+QS+PILGFL+ TV  ++ L+P
Sbjct: 74  VFRMFVALIASLVFTILYGSLAAHSSTLGKILIPLLDILQSVPILGFLSATVSIWLVLFP 133

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             ++G E A++FAIFTSQ WNMTFS Y SL + P++LEE +RS RL+ WQ+FW L +P +
Sbjct: 134 ESMLGVEAASMFAIFTSQAWNMTFSFYHSLQSEPKELEEAARSLRLTHWQRFWVLSMPNA 193

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              L+WN MMS+ GGWFF+ ASEMI V +    LPGIGS++A +  EQ L  I +A+L M
Sbjct: 194 TIALLWNCMMSVGGGWFFLTASEMISVNNNTYALPGIGSFVAQSAAEQKLDNIWWAILAM 253

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           + V+   D L+++P + W+ KFR+ ++  +    S +L L R ++    +        +P
Sbjct: 254 VIVVIAIDFLVWKPFLAWAEKFRITQSASVDERHSAILTLIRHSHADEVLRA----LMAP 309

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L   + +L R  G+           L        ++D+      C +    A   +  + 
Sbjct: 310 LRAWLDRLTRIFGITGASSKPAAAHL-------RVIDMIIIAAACVLIGVFAVNLLYVVA 362

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 +  Y   LG +T  RV +L++++S+IW+P+G+ IG  P IS   QP  Q+ A+F
Sbjct: 363 TSVGLFEFAYAGMLGALTFVRVALLVVVSSLIWVPIGVCIGMNPKISRIAQPIVQICASF 422

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PAN  FP  ++    +H++ ++   +LM  GTQWYILFNVIAGASA P+D +++A+SF +
Sbjct: 423 PANFIFPFAMTWFMAWHIDLSIGSIILMALGTQWYILFNVIAGASAIPDDLRQMATSFQL 482

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                W+ +ILP IF  + TGA+TA GGAWNASIV+E+  +G  H+ T GLGAYI  +T 
Sbjct: 483 PLIMRWKTLILPAIFGAWCTGALTAAGGAWNASIVAEIVEFGAFHMETQGLGAYITAATT 542

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            G   + ++GV +M   V+  NR +W PL     +  
Sbjct: 543 VGDGAKTLVGVTVMSLIVVVSNRLIWTPLQRLAEKRY 579


>gi|258542332|ref|YP_003187765.1| anion transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256633410|dbj|BAH99385.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636469|dbj|BAI02438.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639522|dbj|BAI05484.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642578|dbj|BAI08533.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645633|dbj|BAI11581.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648686|dbj|BAI14627.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651739|dbj|BAI17673.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654730|dbj|BAI20657.1| anion transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 582

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 257/549 (46%), Positives = 353/549 (64%), Gaps = 12/549 (2%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++    P      +PI LD+  LP YA RTT+RM +A+  SL+FTFVYATLAAKSRR G 
Sbjct: 45  VRHMLGPLVAPASMPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQ 104

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +LVP+LD++QS+PILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM   MYQ L
Sbjct: 105 ILVPLLDVLQSVPILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGL 164

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++P +LEE +R F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T
Sbjct: 165 RSVPPELEETARCFGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGST 224

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
            I LPGIGSY+ +AI +Q++ A+  A++ M+ VI +YDQ+LFRP+  W+ +FRLE     
Sbjct: 225 DITLPGIGSYVGMAIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNAT 284

Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338
              + W                          N +  + R +  +      + +++ +++
Sbjct: 285 QVVEPWF-----------LRLVRRTRLLRMCGNALLSVGRRISYLPLGSRPDTMRVDADE 333

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
                 D  W+  +  V +G +WQ   Y   H+T   + YV  LG IT+ RVV ++++AS
Sbjct: 334 STGGP-DWLWWGFLLLVCLGASWQVWDYAHTHYTLGQIAYVFGLGGITLVRVVSMLVLAS 392

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +IW+PVGIW G  P  + + Q  AQ  AAFPAN+FFP+ V  + ++ L P++WL+ LMI 
Sbjct: 393 LIWVPVGIWCGLDPTRARRAQILAQYGAAFPANLFFPVFVVVIVHFRLTPDIWLTPLMIL 452

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           G QWYILFNVIAGAS+FP++  EV  +  + GW WWR IILPGI PYY+ G + A GGAW
Sbjct: 453 GAQWYILFNVIAGASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAW 512

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           NA+I SEVA WG   L   GLGAY+A+ST+ G+   V LG ++MC FV+  N  +W PL 
Sbjct: 513 NAAIASEVAQWGETTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCVFVMFTNALVWRPLS 572

Query: 579 LYGTRCLRL 587
            +  R L+L
Sbjct: 573 DFVARRLKL 581


>gi|320450800|ref|YP_004202896.1| ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150969|gb|ADW22347.1| ABC transporter, permease protein [Thermus scotoductus SA-01]
          Length = 553

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 250/570 (43%), Positives = 344/570 (60%), Gaps = 27/570 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN +DLLA  + + ++   L   +E   P       PI+LD   LP+YA RT  RM  A+
Sbjct: 10  PNRYDLLAGAVALALLGGFLLASREALGPY---TPTPISLDPRHLPEYALRTAFRMGVAL 66

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++S LFT VYA LAAK+R L   L+ +LDI+QS+PILGFL  +V     L+PGK +G EL
Sbjct: 67  LLSTLFTLVYAPLAAKTR-LEPFLIAVLDILQSVPILGFLAASVAALSGLFPGKALGFEL 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFA+FTSQ WNM FS YQSL  +PR+LEE +R +RL+  Q+F  L +P+++PGLVWN 
Sbjct: 126 AAIFAVFTSQAWNMAFSFYQSLKTLPRELEEAARLYRLTPPQRFLRLELPYALPGLVWNA 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG T + LPG+GSY+A A+ + ++ A+ YA+L ML  I LYD
Sbjct: 186 MMSMSGGWFFVVASEAISVGKTEVDLPGVGSYLARALAQGNMEALAYALLAMLLTILLYD 245

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ WS +F+ E   G   A SWVL L R++   R +G                 
Sbjct: 246 QLLFRPLVAWSERFKYEERPGEATARSWVLDLLRRSRATRRLGEWLAEAL---------- 295

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
                 +RFH P            +  L  +    +      +  ++   ++      + 
Sbjct: 296 --LERALRFHPPR-----------ALGLPPWLGPALLTALGLLGLEAAARLLLPLGPGEW 342

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  I LG  T  RV+ ++++A+ +W+PVG+ +G RP ++ ++Q   Q LAAFPAN+ +P 
Sbjct: 343 LRAIALGFFTFLRVMGILLLATAVWVPVGVLLGLRPRVAVRVQALLQFLAAFPANLLYPF 402

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +  Y L+  ++ + LM  GTQWYILFNV AGA+A P D  E A ++ ++G R WR 
Sbjct: 403 AAYLLLRYRLSMEVFSAFLMALGTQWYILFNVTAGATALPADLLEAARAYRLSGARLWRR 462

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG+FPY VTG +TA GG WNASIV+EV  WG   L  TGLGAYI  +TE G    ++
Sbjct: 463 LLLPGVFPYLVTGLVTASGGTWNASIVAEVVQWGPHRLEATGLGAYITRATEAGDERRLL 522

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           LG+ +M   V+ LNR LW  LY +     R
Sbjct: 523 LGIAMMSLMVVTLNRLLWRRLYQWAEERFR 552


>gi|208779963|ref|ZP_03247306.1| ABC transporter, permease protein [Francisella novicida FTG]
 gi|208743967|gb|EDZ90268.1| ABC transporter, permease protein [Francisella novicida FTG]
          Length = 574

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 200/579 (34%), Positives = 313/579 (54%), Gaps = 13/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + ++ AILYA+  
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALAA 245

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I         
Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L N    L +    I    P   +++      +      W+ V+    +        + 
Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA
Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  SFH
Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T
Sbjct: 474 LKGWKWWLKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 E  L V+ +C  V     F+W PLY       +
Sbjct: 534 ANNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572


>gi|89072382|ref|ZP_01158961.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34]
 gi|89051914|gb|EAR57366.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34]
          Length = 574

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 192/570 (33%), Positives = 315/570 (55%), Gaps = 16/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N  D++ F + I  I +  +G  +     D      +   +  LP    RTT+R++  M 
Sbjct: 20  NSKDIITFTIFIIAITLYKYGWHDMHHSLDQFQP-EVHGALSQLPYDMLRTTMRLVIGMF 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +F       AAK++ L  +++P ++IM+S+P+LGF+TF+ + F+NL+P  V+G E A
Sbjct: 79  FSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFITFSTIIFINLFPNSVMGLEAA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +IF +FT Q WNM   +YQ+L  +P++L+E ++ F LS WQKFW +  P+++PGL+WN M
Sbjct: 139 SIFGVFTGQAWNMALVVYQTLRIVPQELQEAAQLFNLSPWQKFWRVEFPYTIPGLIWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S S  WF +VA+E+I +    +PL G+G++I +A+   D+  I++A+L ++  I ++DQ
Sbjct: 199 VSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNADVKMIIWAVLAIIINIMVFDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L FRP++ WS KF+ E         SW   +   T  L+ I     N      N  ++  
Sbjct: 259 LFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLKRIIRPIKNTAEVFVNGGRRYL 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                       N  +    + +     I W+ +V       +++   Y+  +    ++L
Sbjct: 319 -----------SNRKRYALPKTLRLFSVISWYAIVLYFCTTWSYELWHYVPKN----EIL 363

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L   T  RV+  ++++ +I +P G+WIG  P  +   QP  Q+ +A P N+FFPLV
Sbjct: 364 SMVPLMAKTTLRVLAAMLLSLVIGVPAGVWIGLSPRATRIAQPIIQIGSALPPNIFFPLV 423

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +     + NLW   L++ GT WY+LFNVIAG +  P +  E+A  F +TG  WW   
Sbjct: 424 TIALMATSTSLNLWTIPLIMMGTTWYVLFNVIAGVTTLPQEMIELAKLFKLTGRTWWLRF 483

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP IFPY +TG I+A GGAWN++I +E+  WG   + T+GLG YI+++T   + P+  L
Sbjct: 484 MLPAIFPYILTGVISAAGGAWNSAICAELLQWGVSTVHTSGLGFYISKATIDNALPQAAL 543

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G + M   V     F+W+PLY    R  ++
Sbjct: 544 GCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573


>gi|241667474|ref|ZP_04755052.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254876021|ref|ZP_05248731.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842042|gb|EET20456.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 574

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 201/579 (34%), Positives = 313/579 (54%), Gaps = 13/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + ++ AILYA++ 
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I         
Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L N    L +    I    P   +++           I W+ V+    +        + 
Sbjct: 306 WLINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISACVWAGNALWHF- 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA
Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  SFH
Sbjct: 414 IPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFH 473

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T
Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 E  L V+ +C  V     F+W PLY       +
Sbjct: 534 GNNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572


>gi|167626895|ref|YP_001677395.1| anion ABC transporter permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596896|gb|ABZ86894.1| ABC-type anion transport system, duplicated permease component
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 574

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 200/579 (34%), Positives = 312/579 (53%), Gaps = 13/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + ++ AILYA++ 
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++  I L+DQLLFRP++ WS KF+ E          W+   ++K+  +  I         
Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQLVNTIKPIFSTIVF 305

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L N    L +    I    P   +++           I W+ V+    +        + 
Sbjct: 306 WLINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISACVWAGNALWHF- 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA
Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S+ P +  E+  SFH
Sbjct: 414 IPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFH 473

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW+WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T
Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 E  L V+ +C  V     F+W PLY       +
Sbjct: 534 GNNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572


>gi|148240768|ref|YP_001226155.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. WH 7803]
 gi|147849307|emb|CAK24858.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. WH 7803]
          Length = 586

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 224/572 (39%), Positives = 335/572 (58%), Gaps = 14/572 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            I DL   VL + ++  +     +  V    +   +  I L+   LP YA+R++LRM   
Sbjct: 27  PILDLALLVLGLALVAGIASLSSQMAVSFHPEASTLSGIDLNPIHLPAYAARSSLRMFIG 86

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + ISL    V  TLAA++     V++P++DI+QS+P+LGFL  TV +F+NL+ G ++G E
Sbjct: 87  LGISLGICLVVGTLAARNAIAERVILPLVDILQSVPVLGFLAITVAFFINLFRGSLLGLE 146

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A+IFAI T Q+WN+ FS YQSL  +P DL E +  +R SGWQ+F  L +P     LVWN
Sbjct: 147 AASIFAIVTGQLWNLIFSYYQSLRTVPSDLSEAATLYRFSGWQRFTQLDLPAGSINLVWN 206

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            MMS +GGWFF   SE I V +    LPG+GSY+A AI  Q L  IL+A++TM+ V+ + 
Sbjct: 207 GMMSFAGGWFFATQSEAISVNNADYTLPGLGSYVAAAIAAQRLDCILWALITMVLVVVIS 266

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
           DQL +RP++ WS +FRL+      PA SW L L  ++  LR++  +      PL+  +++
Sbjct: 267 DQLFWRPLVAWSERFRLDSGAAGEPARSWFLDLLNRSGGLRWLKAAGAITLQPLTRTLRR 326

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L +              +  SN R S  +  +   ++  +A       +  I++     +
Sbjct: 327 LTQA------------PEQPSNTRESGAVPAWLDPLLLLLAGAAVVWGLDVILHEVGPAE 374

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            L V+  G +T+ RV+ ++ ++S++++P+ + IG RP +S+ +QP   +LA+ PAN+ FP
Sbjct: 375 TLEVLGFGLLTLGRVLAVVALSSLVFLPLAVMIGLRPRLSTLLQPLILMLASIPANLLFP 434

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                  +  L   +   +LM  G+QWY+LFN  AGASA PND +E+   F + G + W 
Sbjct: 435 FFTLLFLFSGLPMWIGSVILMALGSQWYVLFNTTAGASAIPNDLREMEQVFGLRGKQRWS 494

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             +LP +F  +VTGAITA G AWNASIV+EV +WG   L+TTGLGAYIAE+T  G  P +
Sbjct: 495 RYLLPAVFSSWVTGAITASGAAWNASIVAEVVTWGSTTLQTTGLGAYIAEATRSGDGPRI 554

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +LG+++M  FV+  NR LW PLY    R   L
Sbjct: 555 LLGLMVMSLFVVGFNRLLWRPLYRIAERRFAL 586


>gi|260892984|ref|YP_003239081.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
 gi|260865125|gb|ACX52231.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
          Length = 572

 Score =  438 bits (1128), Expect = e-120,   Method: Composition-based stats.
 Identities = 220/576 (38%), Positives = 341/576 (59%), Gaps = 13/576 (2%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++RR   +  D+   + V+ ++  L+H       P  +     I L+   LP Y  R+ 
Sbjct: 7   LVARRF--SFIDVAVILTVLALLYTLIHLGAGMAEPLRMGAK--IDLNPIHLPYYVGRSL 62

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LRM  A++ SL+F  VY   AA S R   +L+P LDI+QS+P+LGFL+ T+   + L+P 
Sbjct: 63  LRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVALFPN 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            ++GAELA+IFA+FT+Q WN+T+  YQSL  IPR+L + +  FRL+ W + W L +PFS 
Sbjct: 123 SMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELPFSA 182

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             LV+N MMS +G WFF+ ASE I V +  I LPG+GSY+A AI  +D+ A++ +++TM 
Sbjct: 183 IPLVYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSIITMA 242

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
             I L DQL +RP+ +WS +F+LE+T     +  W+L + ++++ +R  G          
Sbjct: 243 VTIVLVDQLFWRPVAIWSQRFKLEQTKEQMESH-WLLKMLQRSSLVRAFGSRVLEPMQ-- 299

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
               ++   + G +     E+ L     +R+ ++L +F   ++ G      ++ +  ++ 
Sbjct: 300 ----RRFIISGGRLVAGTAESSLGAGI-KRIVHLLGVFLLLLLIGYTAYYGYRGV-LLIA 353

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               + +L +  LG  +  RVV  + + ++I +P+G+++G+    + + QPF   +A+FP
Sbjct: 354 QLGLEGILDLFRLGFYSFLRVVAAVALGTLIMLPLGVYLGWNAERARRWQPFITFVASFP 413

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           AN+ FP         H++       LM+ GTQWYILFNVIAG S+ PND KE A+   + 
Sbjct: 414 ANMLFPFFTILFLRLHISQEWGAIPLMMLGTQWYILFNVIAGVSSLPNDLKEAAAVLGVK 473

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW+ WRY ILPGIFP+ VTG ITA GGAWNA+IV+EV SWG   L+ TGLGAYI  +TE 
Sbjct: 474 GWKRWRYFILPGIFPFLVTGGITAAGGAWNATIVAEVVSWGDHTLQATGLGAYITNATEA 533

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G++P ++ G++ M  +V+A+NR  W  LY       
Sbjct: 534 GNWPAIMGGIITMSLYVVAINRLFWRRLYHLAEVKY 569


>gi|22299940|ref|NP_683187.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
 gi|22296125|dbj|BAC09949.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
          Length = 574

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 203/567 (35%), Positives = 316/567 (55%), Gaps = 13/567 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  + +I +I  +++   + T   D    + I L    LP Y ++T LRML A +ISL
Sbjct: 20  DGLMILALIALIFWIVNTAAQFTGRYDP--TITIELSPAVLPSYTAQTLLRMLIAYMISL 77

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F+ +Y+ +A  +R    +L+P+LDI+QSIP+L FL   V+  + L+PG  +G ELAAI 
Sbjct: 78  VFSILYSYIAYYNRTAEKILLPLLDILQSIPVLSFLPGVVLALIALFPGSRMGVELAAII 137

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I+T   WNMTFS YQSL ++P++L EV++ +RL  WQ+ W L +P    GL+WN +MS+
Sbjct: 138 LIYTGMAWNMTFSFYQSLISVPQELREVAKIYRLGWWQRVWTLDLPAGAIGLIWNSVMSV 197

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++A E   +G+    LPG+GSY+A A  EQD  A++Y +  ++GVI   D L++
Sbjct: 198 AGGWFFLMAIESFTIGEKTFTLPGLGSYLATAANEQDYAALIYGLAVLIGVIITIDILVW 257

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP+I W  KF++E         S++L   R++  LR         F+P+   + +  R  
Sbjct: 258 RPLIAWGEKFKMEMVEAENVPKSFLLDFLRRSPTLRAFH---QQIFAPVWERLDEQLRPK 314

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              +   P N         +          ++  V +G    +    +   ++Q    + 
Sbjct: 315 HPRQSLAPRNGQGHWRITPI--------ILLISAVVVGWGAIAFVQQMFKVSWQQWQQIT 366

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T  RV+  ++++ +  +PVG+ IG  P  +  +QP  Q+ A+ PA   FP+++  
Sbjct: 367 LGAVLTTLRVMTALLLSLLWTVPVGVAIGRNPRAAQVLQPIVQIAASVPATALFPVLLLA 426

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++       +    LM+ GT WYILFNVIAGA A P +  E A  + +  W+ WR +ILP
Sbjct: 427 LANVGGGLEIGSVALMMLGTMWYILFNVIAGAQAIPTELFEAAVVYQLPWWQRWRTLILP 486

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           GIFPY +TG ITA GGAWNASIVSE   + +   +T GLGA I+E++ +G FP ++    
Sbjct: 487 GIFPYLMTGIITAVGGAWNASIVSEYVEFQNQTEQTLGLGALISEASVRGDFPLLMAATA 546

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M   V+  NR +W PLY       +L
Sbjct: 547 VMSLLVVLTNRLVWRPLYRLAETKYQL 573


>gi|90577269|ref|ZP_01233080.1| hypothetical protein VAS14_09499 [Vibrio angustum S14]
 gi|90440355|gb|EAS65535.1| hypothetical protein VAS14_09499 [Vibrio angustum S14]
          Length = 574

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 193/570 (33%), Positives = 315/570 (55%), Gaps = 16/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N  D++ F + I  I +  HG  +     D      +   +  LP    RTT+R++  M 
Sbjct: 20  NSKDIITFTIFIIAITLYKHGWHDMHHSLDQFQP-EVKGSLSQLPYDMLRTTMRLVIGMF 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +F       AAK++ L  +++P ++IM+S+P+LGF+TF+ + F+NL+P  V+G E A
Sbjct: 79  FSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFITFSTIIFINLFPNSVMGLEAA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIF +FT Q WNM   +YQ+L  +P++++E ++ F LS WQKFW +  P+++PGL+WN M
Sbjct: 139 AIFGVFTGQAWNMALVVYQTLRIVPKEIQEAAQLFNLSPWQKFWRVEFPYTIPGLIWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S S  WF +VA+E+I +    +PL G+G++I +A+   D+  I++A+L ++  I ++DQ
Sbjct: 199 VSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNADVKMIIWAVLAIIINIMVFDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L FRP++ WS KF+ E         SW   +   T  L+ I     N      N  ++  
Sbjct: 259 LFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLKRIIRPIKNTAEIFVNGGRRYL 318

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                               + +     I W+ +V       +++   Y+  +    ++L
Sbjct: 319 -----------PARSSYALPKTLKLFSVISWYAIVLYFCTTWSYELWHYVPKN----EIL 363

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L   T  RV+  ++++ +I +PVG+WIG  P  +   QP  Q+ +A P N+FFPLV
Sbjct: 364 SMVPLMAKTTLRVLAAMLLSLVIGVPVGVWIGLSPKATRIAQPIIQIGSALPPNIFFPLV 423

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +   + + NLW   L++ GT WY+LFNVIAG +  P +  E+A  F +TG  WW   
Sbjct: 424 TIALMATNTSLNLWTIPLIMMGTTWYVLFNVIAGVTTLPQEMIELAKLFKLTGRTWWLRF 483

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP IFPY +TG I+A GGAWN++I +E+  WG   + T+GLG YI+++T   + P+  L
Sbjct: 484 MLPAIFPYILTGVISAAGGAWNSAICAELLQWGVSTVHTSGLGFYISKATIDNALPQAAL 543

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G + M   V     F+W+PLY    R  ++
Sbjct: 544 GCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573


>gi|225872174|ref|YP_002753629.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake
           transporter (NitT) family, permease protein
           [Acidobacterium capsulatum ATCC 51196]
 gi|225793760|gb|ACO33850.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake
           transporter (NitT) family, permease protein
           [Acidobacterium capsulatum ATCC 51196]
          Length = 587

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 220/579 (37%), Positives = 320/579 (55%), Gaps = 7/579 (1%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +  R +P I DL     ++ +  ++L   +        V  V I      LP YA  +
Sbjct: 14  AQVMERTWPFILDLGVAGSLLALFYVVLWVARSWL--HSAVPEVTIYRSPSHLPMYALES 71

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T+R+  A ++SL+F  VY  +AA +R L  +++  LDI+QSIP+L FL   ++  M+L+P
Sbjct: 72  TVRIFVAYILSLIFAIVYGYIAAYNRWLEALMIATLDILQSIPVLSFLPGVMLAMMSLFP 131

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            + IG EL AI  IFT +VWNM FS Y SL +IP++L E     R S WQ+   L +PFS
Sbjct: 132 NRQIGIELGAILLIFTGEVWNMAFSFYSSLKSIPKELMEACTINRFSRWQRLIQLELPFS 191

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
             GL+WN M+S++ GWFF++  EM  VG     LPG+GSY+  A    D++AI++ +LTM
Sbjct: 192 AIGLIWNSMVSVASGWFFLMVCEMFPVGSRNFRLPGLGSYLQTAASNGDVVAIIWGLLTM 251

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           + +I L DQLL+RP+I WS+KF+ E         S +L+L R +N L+++        +P
Sbjct: 252 MLIIVLTDQLLWRPIIAWSDKFKFENVESAERITSPILHLIRNSNMLQYVSR---RAVTP 308

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +S          G  R   P       S++     L          + IG        ++
Sbjct: 309 ISEAFYTRVARGGPTRRRLPAADETRRSSR--GRTLTYALIVTAAVLGIGTLAFHAMVLL 366

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              +  + L ++    +T  RV   ++IAS+  IPVG+ IGF P +++  QP AQ+ A+F
Sbjct: 367 REASTHEFLVLLGAAGMTFLRVNASLLIASLWTIPVGVAIGFHPRLANIAQPIAQIAASF 426

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA   FPL+V  +    +   +    LM+ GTQWYILFNVIAGA A P+D +EVA  F  
Sbjct: 427 PATALFPLIVIGLMRLGMGLGIGSIALMLLGTQWYILFNVIAGAMAIPSDLREVAGLFRF 486

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              + W  +ILPGIFPY VTG ITA GGAWNASIV+E        ++T GLGA I+ +++
Sbjct: 487 GNLQRWTTLILPGIFPYLVTGLITASGGAWNASIVAEYFKIQGKTMQTIGLGAQISAASD 546

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G FP ++L  +IM   V+ +NR +W  LY  G    RL
Sbjct: 547 HGDFPRLLLATIIMALMVVTINRLVWRRLYHLGETRFRL 585


>gi|320107387|ref|YP_004182977.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
 gi|319925908|gb|ADV82983.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
          Length = 589

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 209/575 (36%), Positives = 317/575 (55%), Gaps = 11/575 (1%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR +P + DLL   + +     ++               V I+L   +LP+YA  + +RM
Sbjct: 24  RRTWPVMLDLLVAAIGLACFYGVVRIATMWMAHAQP--DVIISLAPSALPRYAFFSMVRM 81

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A  +SL F   Y  +AA SRRL  +++  LDI+QSIP+L FL   ++  + L+P + I
Sbjct: 82  ALAYFLSLAFAIGYGYVAAYSRRLEALMIAGLDILQSIPVLSFLPGVMLAMVALFPSRQI 141

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G EL AI  IFT Q WN+ FS Y SL +IP++L+E +  +  S WQ+ W L +P++  GL
Sbjct: 142 GVELGAIILIFTGQAWNIAFSFYASLKSIPKELDEAATLYGFSRWQRLWQLELPYAAIGL 201

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN M+S++GGWFF++A EM V+G     LPG+GSY+  A    +  A+L+ + TM+G++
Sbjct: 202 IWNSMVSVAGGWFFLMACEMFVLGPRDFRLPGLGSYLQTAASRGNFPAMLWGIATMIGIV 261

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
            L DQL++RP+I WS++F+ E+        S +L+  + +   R +   S     PL+  
Sbjct: 262 VLTDQLVWRPLIAWSDRFKFEQVESKSHVRSPLLHALQHSTAFRSV---SKKIIRPLNE- 317

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
             K+ R     R    E           S +L    F  +       A  +I  ++    
Sbjct: 318 --KIYRHFAATRTTHIEY--DAVKRGAPSRVLRAIVFIALLCGVGYSAVHAID-LLRSVE 372

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            Q  L ++     T  RV + +++AS+  IPVG+ IGF P ++   QP AQ+ A+ PA  
Sbjct: 373 LQQFLTILRGAAATFLRVNIALVLASLWTIPVGVAIGFNPRLARIAQPVAQIAASVPATA 432

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+++  +  +     L   LLM+ GTQWYILFNVIAGA A P D  EVA+ F  +  +
Sbjct: 433 LFPILLLALVRFRGGMGLAAILLMLLGTQWYILFNVIAGAMAIPTDLLEVATLFRFSRIQ 492

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W+ +ILPGIFPY +TG +TA GGAWNASIV+E        L+T GLG  I+ +T+ G F
Sbjct: 493 KWKTVILPGIFPYLITGLLTASGGAWNASIVAEYFRLHDQTLKTFGLGEQISSATDSGQF 552

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++L  ++M   V+ +NR +W PL+       +L
Sbjct: 553 QLLLLATIVMALMVVTMNRLVWRPLFRLSETKYKL 587


>gi|254372131|ref|ZP_04987624.1| hypothetical protein FTCG_01273 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569862|gb|EDN35516.1| hypothetical protein FTCG_01273 [Francisella novicida GA99-3549]
          Length = 574

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/579 (34%), Positives = 311/579 (53%), Gaps = 13/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ S  F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + +++AI YA++ 
Sbjct: 186 SIPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALVA 245

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++  I L+DQLLFRP++ WS KF+ E          W+   ++K+ F+  I         
Sbjct: 246 IIVNIVLFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            L N    L +    I    P   +++      +      W+ V+    +        + 
Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA
Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  SFH
Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + GW+WW    +P +FPY V G I+A  GAWN++I +E+  WG   ++  G+GA ++ +T
Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAASGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 E  L V+ +C  V     F+W PLY       +
Sbjct: 534 ANNQLHEAALAVVALCSLVAVCVIFIWKPLYKLAETKYK 572


>gi|320450206|ref|YP_004202302.1| ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150375|gb|ADW21753.1| ABC transporter, permease protein [Thermus scotoductus SA-01]
          Length = 557

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 261/571 (45%), Positives = 353/571 (61%), Gaps = 25/571 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           PN  DLLA VL +G++ + L   +E   P       PI+LD   LP+Y  RT  RM  A 
Sbjct: 10  PNRHDLLALVLTLGLLALFLEASREAAGPFHP---NPISLDPLKLPEYTLRTAFRMGVAF 66

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++S LFT VYA LAAK+R L   L+ +LDI+QS+PILGFL  T   F  L+PG+ +G EL
Sbjct: 67  LLSTLFTLVYAPLAAKTR-LEPFLISLLDILQSVPILGFLAATAGAFAALFPGRALGYEL 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           AAIFA+FTSQ WN+ FS YQSL  +PR+L+E +  FRLS WQ+F+ L +PF++PGLVWN 
Sbjct: 126 AAIFAVFTSQAWNIAFSFYQSLKTLPRELDEAATLFRLSPWQRFFRLELPFALPGLVWNA 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFFVVASE I VG T + LPGIGSY+A AI + +  A+L A L+ML  I  YD
Sbjct: 186 MMSMSGGWFFVVASEAIAVGKTQVELPGIGSYLATAIAQGNGRAVLLAALSMLVAILAYD 245

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           QLLFRP++ WS +F+ E   G+ PA SWVL L R+T+ LR I  ++   FS     + +L
Sbjct: 246 QLLFRPLVAWSQRFKYEERPGLEPARSWVLDLLRRTHTLRGIAEAT---FSWALEALFQL 302

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R     R   P+    L           I W                   +    + +V
Sbjct: 303 ERRRPPRRLILPQWVPVLPLLLLGGIGAFILW-----------------RQLQPLGWLEV 345

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V  LG  T  RV+ ++++A+ IW+PVGI +G RP ++ +++   QLLAAFP N+ +PL
Sbjct: 346 ARVFLLGFFTFLRVMGVLLLATAIWVPVGILLGLRPRVAQRVEALLQLLAAFPVNLLYPL 405

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +  +HL+  ++ + LM  GTQWYILFN +AG+ A P D KE A SF + G   WR 
Sbjct: 406 LALFLLRHHLSLEVFSAFLMALGTQWYILFNAVAGSMALPEDLKEAARSFGLKGLTLWRR 465

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEV 555
           ++LPG FP+ +TG ITA GG WNA+IV+EV  WG + L+ TGLG+YIA  T E+G  P +
Sbjct: 466 LLLPGTFPHILTGLITASGGTWNAAIVAEVVQWGSLTLQATGLGSYIARWTLEEGQGPHL 525

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           +LG+ +M  +V+ +NRF+W  LY       R
Sbjct: 526 LLGIAVMSLYVVVINRFVWRRLYRLAEERFR 556


>gi|134302716|ref|YP_001122684.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|134050493|gb|ABO47564.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis WY96-3418]
          Length = 574

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 193/580 (33%), Positives = 311/580 (53%), Gaps = 15/580 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIAL + + +++AI  YA++
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALV 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I        
Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTIDNPWLYRSYKKSQLVNAIKPIFSTIV 305

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             L N    L +    I    P   +++      +      W+ V+    +        +
Sbjct: 306 FWLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF 357

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ A
Sbjct: 358 ----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 413

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P  +FFP+V   +     + N+W   L++ GT  Y+LFNVI+G S  P +  E+  SF
Sbjct: 414 AIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSCYVLFNVISGFSNLPTEIIEMTKSF 473

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           H+ G +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +
Sbjct: 474 HLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS-T 532

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T      +  L V+ +C  V     F+W PLY       +
Sbjct: 533 TANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 572


>gi|186685736|ref|YP_001868932.1| binding-protein-dependent transporters inner membrane component
           [Nostoc punctiforme PCC 73102]
 gi|186468188|gb|ACC83989.1| binding-protein-dependent transport systems inner membrane
           component [Nostoc punctiforme PCC 73102]
          Length = 579

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/567 (35%), Positives = 322/567 (56%), Gaps = 10/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  ++++  I  ++    + T   +    + I+ ++++LP Y ++T +RM  A   SL
Sbjct: 21  DGLLILVILSFIVAIIRTASKFTGTFEP--ELTISTNINALPGYTAQTLIRMGLAYFFSL 78

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FT +YA  A +SR    +L+P+LDI+QSIP+L FL   V+  ++L+PG+ IG ELAAI 
Sbjct: 79  IFTLLYAYTAYRSRIAERILIPMLDILQSIPVLSFLPGVVLALISLFPGQRIGVELAAIL 138

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFT   WNMTFS YQSL +IP++L E SR +RL+ WQ+FW L +P  + GLVWN +MS+
Sbjct: 139 LIFTGMTWNMTFSFYQSLQSIPQELLETSRVYRLNPWQRFWTLELPSGVIGLVWNSVMSV 198

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++A E   +G+    LPG+GS++  A  + D  AI + ++ ++ +I   D  ++
Sbjct: 199 AGGWFFLIAIESFTLGNQDFRLPGLGSFLGTAANKGDFKAIFWGLVLLIAIIVATDFFVW 258

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP+I W+ +F+LE         SW+L  FR++  LR I   S   F PL   +       
Sbjct: 259 RPLIAWAERFKLEMIETENAPQSWILDTFRRSPTLRAI---SDRVFQPLQTVLDDSL--- 312

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            +  F      +    N  +   L+  +      + +   W+++  ++    + D   VI
Sbjct: 313 -IRSFPVRSVPINAKGNLNLPSFLNWIFVSGFSLIVLWGTWEAV-LLLRTLGWDDWQQVI 370

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T  RV++ +I++ +  +PVG+ IG    ++  +QP  Q+ A+ PA   FP+++  
Sbjct: 371 KGAMLTALRVIIALILSLLWTVPVGVAIGRNRRLAQVLQPLVQIAASVPATALFPVLLLG 430

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++       +    LM+ GT WYILFNVIAGA + P+D  E AS + ++  + WR +ILP
Sbjct: 431 LTRIAGGLQIGAIALMMLGTMWYILFNVIAGAQSIPSDLIEAASVYKLSRLQRWRTLILP 490

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            IFPY +TG I+A GGAWNASIVSE  ++    + T+GLGA I+ +T  G+F  ++    
Sbjct: 491 AIFPYLITGIISAVGGAWNASIVSEYVTFQGRVISTSGLGATISYATATGNFSLLLASTA 550

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           IM   V+  N  +W PLY       +L
Sbjct: 551 IMSLLVVLTNHLVWRPLYNLAQEKYQL 577


>gi|329113495|ref|ZP_08242276.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
 gi|326697320|gb|EGE48980.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
          Length = 582

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 263/549 (47%), Positives = 360/549 (65%), Gaps = 12/549 (2%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++    P      +PI LD+  LP YA RTT+RM +A+  SL+FTFVYATLAAKSRR G 
Sbjct: 45  VRHMLGPLVAPASMPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQ 104

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L+P+LD++QS+PILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM   MYQ L
Sbjct: 105 ILIPLLDVLQSVPILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGL 164

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++P +LEE +R F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T
Sbjct: 165 RSVPPELEETARCFGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGST 224

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
            + LPGIGSY+ +AI +Q++ A+  A++ M+ VI +YDQ+LFRP+  W+ +FRLE     
Sbjct: 225 DVTLPGIGSYVGMAIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNTA 284

Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338
              + W L L R+T  LR  G           N +  + R +  +      + +   ++ 
Sbjct: 285 QVVEPWFLRLVRRTRLLRMGG-----------NALLSVGRRISYLPLGARPDTVHATADD 333

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
             S   D  W+  +  V +  +WQ   Y   H+T+  + YV  LG IT+ RVV ++++AS
Sbjct: 334 N-SDGADWLWWGFLLIVCLAASWQVWAYAHTHYTFGQIAYVFGLGGITLLRVVSMLVLAS 392

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +IW+PVGIW G  P  + + Q  AQ  AAFPAN+FFP+ V  + ++HL P++WL+ LMI 
Sbjct: 393 LIWVPVGIWCGLDPMRARRAQILAQYGAAFPANLFFPVFVVVIVHFHLTPDIWLTPLMIL 452

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           G QWYILFNVIAGAS+FP++  EV  +  + GW WWR IILPGI PYY+ G + A GGAW
Sbjct: 453 GAQWYILFNVIAGASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAW 512

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           NA+I SEVA WG   L   GLGAY+A+ST+ G+   V LG ++MC FV+  N  +W PL 
Sbjct: 513 NAAIASEVAQWGETTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCIFVMFTNALVWRPLS 572

Query: 579 LYGTRCLRL 587
            +  R L+L
Sbjct: 573 DFVARRLKL 581


>gi|320160169|ref|YP_004173393.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319994022|dbj|BAJ62793.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 574

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 205/569 (36%), Positives = 316/569 (55%), Gaps = 12/569 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F +   +++ G+  +L  GI+        V    I+L    LP YA R+  RM +A ++
Sbjct: 17  RFGVADVLVLFGLAALLYAGIRLALNAPPAVREPVISLQPQVLPWYALRSVSRMFAAYLL 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S+ FT +Y  +AA +RR   VL+P+LD++QS+PIL FL   ++    + P   + AEL++
Sbjct: 77  SMAFTLIYGRVAAYNRRAEQVLIPLLDVLQSVPILSFLPVVLLGLRAILPEG-LAAELSS 135

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  IFTSQVWN+TF+ YQSL  IP++L E S  FRL+ W +F  L +PF+   LVWN MM
Sbjct: 136 VVLIFTSQVWNLTFAWYQSLRTIPKELREASAIFRLNTWFQFKTLELPFAAIALVWNSMM 195

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S +GGWFF++A+E+  VG+    LPG+G+Y+  A  + ++ AI + +L ++  I + DQL
Sbjct: 196 SWAGGWFFLMAAEIFTVGEQDYRLPGLGAYLHEAANQGNIPAIFWGVLALILTIIILDQL 255

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           ++RP++ W+ +F+LE      P  SW   L   +  + ++       F+P++  +     
Sbjct: 256 VWRPLMAWTERFKLEMVENDNPPTSWFYNLIGHSRIIHWLN---QRIFTPINEAIDARMA 312

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                    P       ++ R     +I    V  GV +    Q++  +  + +      
Sbjct: 313 RWLNPPLLRP-------AHSRKIPWGEIVLGLVCIGVVLYWGAQALRLLF-NLSLSSWSA 364

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T  RV++ ++IA    IPVG+ IG  P ++S  QP  Q++A+ PA   FP+ V
Sbjct: 365 IALGIGATFLRVLISLLIALAWTIPVGVAIGTNPRLASLFQPLVQVVASVPATAIFPIFV 424

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +       NL   LLM+ GTQWY+LFNVIAGASA P D +  A   H++ W+ WR +I
Sbjct: 425 LLLIQLPGGINLSAILLMLMGTQWYLLFNVIAGASAIPQDLRYTARLIHLSKWQQWRTLI 484

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP +FPY VTG ITA GGAWNASIVSE  ++G   + T G+GA I +ST +G +  ++  
Sbjct: 485 LPALFPYLVTGMITASGGAWNASIVSEYVTFGGKIVNTVGIGALITQSTAQGDYSLLLAS 544

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            L M   V+ +NR  W  +YL      R+
Sbjct: 545 TLAMVVTVVLINRLFWRRMYLLAEERYRM 573


>gi|148658669|ref|YP_001278874.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148570779|gb|ABQ92924.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 581

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 207/562 (36%), Positives = 308/562 (54%), Gaps = 13/562 (2%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ I+ +L  GI         V    I+L + +LP YA  +  RM +A  +SL FT +
Sbjct: 32  IIVLIIVGLLALGIWLAEAAPAEVRGPEISLSITALPFYAFHSVGRMAAAYALSLGFTLI 91

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           Y  +AA + R   VL+P+LD++QS+PIL FL   ++ F  + P   I  ELA+I  IFTS
Sbjct: 92  YGYVAAYNPRAERVLMPLLDVLQSVPILSFLPVVLLSFTAILPEG-IAVELASIVLIFTS 150

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           QVWNMTF+ YQSL  +PR+L E S  FR + W++   L +PF    L+WN MMS +GGWF
Sbjct: 151 QVWNMTFAWYQSLTTVPRELREASSIFRFTRWRRLTTLELPFGALALIWNSMMSWAGGWF 210

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           F++A+E+  +G     LPG+G+Y+  A   ++L AI Y + T++ VI L DQL++RP++V
Sbjct: 211 FLMAAEIFTLGARDFRLPGLGAYLQTAANAENLPAIGYGIATLIVVIVLLDQLIWRPLLV 270

Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325
           W+++F+LE      P  SW   L +       IG         L     +L         
Sbjct: 271 WADRFKLEMVESDNPPQSWFYDLLQHATLKDVIGGVVAPVGRTLDALFDRLL-------- 322

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
                  +  S    S     + F  + G A        G ++   + +  L +      
Sbjct: 323 ----PLPRATSGDTNSGFRIGWLFLALIGAAAVAGTLLGGRMLIQVSPEQWLGIGIGLGA 378

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T  RVV  + IA I  +P+G++IG +P  ++ +QP  Q++A+ PA   FP++V  +    
Sbjct: 379 TFLRVVAALAIALIWTVPLGVYIGMQPRAAAVLQPIIQIVASVPATALFPVLVLALLSIP 438

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N+   LLM+ GTQWY+LFNVIAGASA P D +       ++GW+ WR +ILP +FPY
Sbjct: 439 GGLNIAAVLLMLLGTQWYVLFNVIAGASAIPQDLRYTTDLLQLSGWQRWRTLILPALFPY 498

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG ITA GGAWNASIV+E   +G    ++TG+GA I  +T  G +P ++   L M   
Sbjct: 499 LITGMITASGGAWNASIVAEFVVFGGQTYQSTGVGAQITSATADGDYPRLLAATLAMVIT 558

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
           V+A+NR +W  LY       R+
Sbjct: 559 VVAINRLVWRRLYRLAETVYRM 580


>gi|299136998|ref|ZP_07030181.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298601513|gb|EFI57668.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 590

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 209/575 (36%), Positives = 322/575 (56%), Gaps = 10/575 (1%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R +P + DL    + +     ++          +    + I+L   +LP YA  + +R+
Sbjct: 24  KRTWPVVMDLCVAGIGLACFYGVVRIAHYWFGHAEP--EIVISLSPRALPLYAFYSIVRI 81

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A ++SLLF   Y  +AA SRRL  ++V  LDI QSIP+L FL   ++  + L+P + I
Sbjct: 82  GLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVLSFLPGVMLAMVALFPTRQI 141

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G E+ AI  IFT +VWNM FS Y S+ +IPR+L E +  +R S WQ+ W L +P+   GL
Sbjct: 142 GVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYRFSRWQRLWQLELPYGAIGL 201

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           VWN M+S++GGWFF++A EM V+G     LPG+GSY+  A  E D  AI+  +  M+G+I
Sbjct: 202 VWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAASENDTRAIVMGLAVMIGII 261

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
              DQL++RP IVWS+KF+ E+  G     S +L+L   +  LR +   +     P+S N
Sbjct: 262 VAIDQLIWRPAIVWSDKFKFEQVEGGAHVRSPLLHLLTHSGALRTLRRHT---LDPVSEN 318

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +          R    +      + ++ S         ++    I +A +++  ++    
Sbjct: 319 IYCSLAQRRERRLSLADG----VTEKKGSAWFRWVAVLLLLVAVIYLASEAL-ILLRQVR 373

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
              ++ V+     T  RV + ++IA+   IPVG+ IGF P ++   QP AQ+ A+ PA  
Sbjct: 374 APQLVAVLHGAAATFLRVNIALVIAAAWTIPVGVAIGFNPKLARLAQPLAQIAASVPATA 433

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+++  +        +   LLM+ GTQWYILFNVIAGA A P+D +EVA  FH +  +
Sbjct: 434 LFPVILLALIRVGGGMGIASILLMLIGTQWYILFNVIAGAMAIPSDLREVAQLFHFSTLQ 493

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            WR +ILPGIFP+ +TG +TA GGAWNASI++E     +  ++T GLGA I+ +T+ G F
Sbjct: 494 RWRTVILPGIFPFLITGMVTASGGAWNASIIAEYFHLNNQTMQTVGLGAQISSATDHGEF 553

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++L  ++M   V+ +NR +W PLY       +L
Sbjct: 554 HLLLLSTIVMALMVVTINRLVWRPLYRLSETRYKL 588


>gi|163849245|ref|YP_001637289.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222527230|ref|YP_002571701.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163670534|gb|ABY36900.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222451109|gb|ACM55375.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 570

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 199/546 (36%), Positives = 300/546 (54%), Gaps = 15/546 (2%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            +   + +    I+L + +LP YA  +  RM  A ++S +FT VY  +AA + R   +L+
Sbjct: 39  ASSAPETIRGPEISLSLTALPFYALYSVGRMAMAYMLSFIFTLVYGYIAAYNPRAERILI 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+LD++QS+PIL FL   ++    + P +    EL A+  IFTSQVWNMTF+ YQSL  I
Sbjct: 99  PLLDVLQSVPILSFLPVVLLGLSAILP-QAFAVELTAVVLIFTSQVWNMTFAWYQSLTTI 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L E S  FR S WQ+F  L  PF  P LVWN MMS +GGWFF++A+E+  +G+    
Sbjct: 158 PKELREASSIFRFSWWQRFITLEFPFGAPTLVWNSMMSWAGGWFFLMAAEIFTLGERDFR 217

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           LPG+G+++  A    DL AI + + ++  VI + DQL++RP++VWS +FRLE       +
Sbjct: 218 LPGLGAFLQTAADTGDLGAIGWGLFSLAVVIVVLDQLVWRPLLVWSRRFRLEFVEREEDS 277

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
            SW   L++++  + +IG             ++ L   LG      P + +     +R  
Sbjct: 278 TSWFYDLWQRSMLVAWIG-----------RRLRWLNDLLGRWLGQHPADDVPTGERRRSL 326

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +        +V     G    +    +   +      ++     T  RV V + IA +  
Sbjct: 327 FGWIALAVIIVLT---GWGLLNGSRFLFSVSLTQWGEILLGVAATFGRVSVAMCIALLWT 383

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ IG R  I++ +QP  Q+LA+ PA   FP++V  +  +    NL    LM+ GTQ
Sbjct: 384 VPLGVLIGTRQKIAAVLQPVVQILASIPATALFPVLVLALLEFPGGLNLAAIALMMLGTQ 443

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           WYILFNVIAG +A P D +  +    + GWR WR +ILPG+FPY +TG ITA GGAWNAS
Sbjct: 444 WYILFNVIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFPYLITGLITASGGAWNAS 503

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           IV+E   +     +T G+G+ IA +T+ G F ++    L M   V+ +NR +W  LY   
Sbjct: 504 IVAEYVVFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMIITVVTINRLVWRRLYRLA 563

Query: 582 TRCLRL 587
               RL
Sbjct: 564 EDRYRL 569


>gi|254368619|ref|ZP_04984635.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121522|gb|EDO65713.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 574

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 192/580 (33%), Positives = 309/580 (53%), Gaps = 15/580 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246
           S+PGL+WN+M+S S  WF + ASE I      + LP IGSYIAL + + +++AI  YA++
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPDIGSYIALGLTDSNIIAIFFYALV 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K   +  I        
Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKFQLVNAIKPIFSTIV 305

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             L N    L +    I    P   +++      +      W+ V+    +        +
Sbjct: 306 FWLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF 357

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               F   D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ A
Sbjct: 358 ----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 413

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P  +FF +V   +     + N+W   L++ GT WY+LFNVI+G S  P +  E+  SF
Sbjct: 414 AIPQPIFFSIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVISGFSNLPTEIIEMTKSF 473

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           H+ G +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +
Sbjct: 474 HLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS-T 532

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T      +  L V+ +C  V     F+W PLY       +
Sbjct: 533 TANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 572


>gi|322434965|ref|YP_004217177.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
 gi|321162692|gb|ADW68397.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
          Length = 590

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 198/575 (34%), Positives = 320/575 (55%), Gaps = 7/575 (1%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR +P + DL   V+ + +   ++   +    P      + ++L   +LP YA  + +R+
Sbjct: 21  RRSWPFVMDLAVAVIGLAVFYCIVLIAKFWAGP--PNTQMVVSLSPRALPAYAFYSVVRI 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A ++SL F   Y   AA + R+   ++ +LDI+QSIP+L FL   ++  + L+P + +
Sbjct: 79  GLAYLLSLAFAIAYGYTAAYNTRIEPFMIAVLDILQSIPVLSFLPGVMLAMVGLFPTRHL 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G EL AI  IFT  VWNM FS Y SL +IPR+L E +R +R S +Q+   L +P++  GL
Sbjct: 139 GVELGAIVLIFTGAVWNMAFSFYSSLKSIPRELIEATRVYRYSPFQRLVQLELPYAAIGL 198

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +WN +MS++G WFF++A EM         LPG+GSY+  A  + +  AI + + TM+ +I
Sbjct: 199 LWNSIMSVAGAWFFLMACEMFHFRSQDFRLPGLGSYLQTAADQGNGHAIAWGLFTMVAII 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
              DQLL+RP+I WS+KF+ E+        S +L L  ++N L  +   +    +     
Sbjct: 259 VATDQLLWRPLIAWSDKFKFEQVESSKRVASPILALLTQSNALTALKEHTTEPLTEYVYT 318

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            +   R + +++    +      +  + + +L      +   V + +A Q++  +++   
Sbjct: 319 -RYAERRIAILKR---QEGRPPAAPSKSANLLAYALIAIAAVVVLYLARQTL-ILISPLQ 373

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
               L ++     T  RV + + +A+   IPVG+ IGF P ++   QP AQ+ A+ PA  
Sbjct: 374 RSQYLELLKGAAATFGRVNLSLALAAAWTIPVGVAIGFHPRLARIAQPLAQIAASVPATA 433

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+++  +        +    LM+ GTQWYILFNVIAGA A P D KEVA+ FH +  +
Sbjct: 434 LFPVILLALVRIGGGLGIGSIALMLLGTQWYILFNVIAGALAIPTDLKEVATLFHFSTLQ 493

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            W+ +ILPGIFP+ +TG +TA GGAWNASI++E     +  L+T GLGA I+ +TE+G F
Sbjct: 494 RWKTVILPGIFPFLITGMVTASGGAWNASIIAEYFRLNNQTLQTVGLGAMISNATEQGQF 553

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           P ++LG +++   V+  NR +W PL+       RL
Sbjct: 554 PILLLGTVMISLMVVTTNRLVWRPLFRLAETRYRL 588


>gi|328676212|gb|AEB27082.1| ABC transporter, permease protein [Francisella cf. novicida Fx1]
          Length = 524

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 215/524 (41%), Positives = 305/524 (58%), Gaps = 10/524 (1%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M   +VISLL TF++ T AAK++R   +++P++DI+QSIP+LGF   TV  F+ ++P  +
Sbjct: 1   MFIGLVISLLITFIFGTWAAKNKRAENIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSL 60

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            GA+ A IF I T+Q WNM  S YQSL  +P++L E +  ++LS WQKFW L VPF+MPG
Sbjct: 61  WGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPG 120

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           LVWN MMSMSG WF +VASE I+V         I L GIGS+I  A   Q+  A+  A++
Sbjct: 121 LVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLSGIGSFIDAANNAQNFTAVGAAIV 180

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           TML  I LYDQLLFRP++ WS KF +        + SW L + +K   ++          
Sbjct: 181 TMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCS 240

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + + N   K  +      ++   +            +L      ++    +   +Q++  
Sbjct: 241 NKIVNI--KFFKKNLDKAYNQKVHRKADKYESVTKRILWNVIIILMILALLYFVYQTVYA 298

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                  ++   V   G  T  RVVVLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ A
Sbjct: 299 KDKDIGIEETFKVFVYGLFTGVRVVVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAA 358

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           AFP NV + +  + V  ++LN N+W  LLM  GTQWYILFNVIAGASA P + K  A + 
Sbjct: 359 AFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENM 418

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAE 545
            + G    +  ++P + PYYVTGAITA GG+WNASI+SE  +WG    ++ +G+G YI +
Sbjct: 419 QLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITK 478

Query: 546 STEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            T         V+LGV++MC  V+A N+  W  LY Y      +
Sbjct: 479 YTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 522



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 7/208 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   T +R++  ++I+ L             ++   + P   +  + P+          F
Sbjct: 314 YGLFTGVRVVVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGV----F 369

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +   +  I  +     W + F++      IP +L+  + + +L G  K    
Sbjct: 370 GTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKF 429

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-DTVIPLPGIGSYIALAIKE--QDLLA 240
            VP  MP  V   + +  G W   + SE I  G D+VI   GIG YI             
Sbjct: 430 LVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSN 489

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +L  ++ M  ++   ++L +R +  ++ 
Sbjct: 490 VLLGVIVMCILVVASNKLFWRRLYNYAE 517


>gi|156740188|ref|YP_001430317.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156231516|gb|ABU56299.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 574

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 206/570 (36%), Positives = 318/570 (55%), Gaps = 13/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
             F +   V+++ I+ +L  GI         V    I+L + +LP YA  +  RM +A V
Sbjct: 17  PRFTVADGVILLIIVGLLALGIWAAESAPAEVRGPEISLSISALPFYALHSVGRMAAAYV 76

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +SL+FT +Y  +AA + R   VL+P+LD++QS+PIL FL   ++    + P   I  ELA
Sbjct: 77  LSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLSLTAILPEG-IAVELA 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +I  IFTSQVWNMTF+ YQSL  +PR+L E S  FR + W++   L +PF    L+WN M
Sbjct: 136 SIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVLELPFGALALIWNSM 195

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           MS +GGWFF++A+E+  +G     LPG+G+Y+  A  E++L AI Y + T++ VI L DQ
Sbjct: 196 MSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGYGIATLVVVIVLLDQ 255

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L++RP++VW+++F+LE      P  SW   L ++      +  +     +P+      L 
Sbjct: 256 LVWRPLLVWADRFKLEMVESDNPPQSWFYDLVQRAALNNAVAGA----VAPIGRVFDALM 311

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L  +        L   +N+R S    +F   +V  +A  +     G ++   +    +
Sbjct: 312 DRLLPLP-----RSLNAETNRRFSVGWLVFAAIIVAALAGVLFG---GRLLLQVSLDQWI 363

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T  RVV  + IA +   P+G++IG +P  ++ +QP  Q++A+ PA   FP++
Sbjct: 364 DIGIGIGATFLRVVAALTIALLWTAPLGVYIGTQPRAAAVLQPIVQIVASIPATALFPVL 423

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +       N+   LLM+ GTQWY+LFNVIAGA+A P D +       ++GW+ WR +
Sbjct: 424 VLALLAVPGGLNVAAVLLMLLGTQWYLLFNVIAGAAAIPQDLRYTTDLLQLSGWQRWRTL 483

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP +FPY +TG ITA GGAWNASIV+E   +G    ++ G+GA I  +T  G +P ++ 
Sbjct: 484 ILPALFPYLITGMITASGGAWNASIVAEYVVFGGQAYQSIGVGAQITSATADGDYPRLLA 543

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             L M   V+A+NR +W  LY       R+
Sbjct: 544 ATLAMVVTVVAINRLVWRRLYRLAENVYRM 573



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 97/266 (36%), Gaps = 3/266 (1%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V+  + +     +  + I  A  +   +        +  + 
Sbjct: 2   TAPTRRVFTPSPPDRPRFTVADGVILLIIVGLLALGIWAAESAPAEVRGPEISLSISALP 61

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS- 439
           +    ++ R+    +++ +  +  G    + P     + P   +L + P   F P+V+  
Sbjct: 62  FYALHSVGRMAAAYVLSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLS 121

Query: 440 --CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +    +   L   +L+     W + F      +  P + +E ++ F  T WR    +
Sbjct: 122 LTAILPEGIAVELASIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVL 181

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      +  ++ +  G W   + +E+ + G    R  GLGAY+  +  + +   +  
Sbjct: 182 ELPFGALALIWNSMMSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGY 241

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
           G+  +   ++ L++ +W PL ++  R
Sbjct: 242 GIATLVVVIVLLDQLVWRPLLVWADR 267


>gi|298250430|ref|ZP_06974234.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548434|gb|EFH82301.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 607

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 221/567 (38%), Positives = 319/567 (56%), Gaps = 6/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+L   +V+G+I +L+        P      V I+L  + LP YA  + LRM+ A ++SL
Sbjct: 46  DVLIVCVVLGLIALLVVAASRWVAPLTP--KVSISLAPNMLPAYAGYSMLRMMLAYILSL 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FT  Y   AA   R G+V+VP+LDI+QSIP+L FL   V+  +  +P   IG ELA++ 
Sbjct: 104 IFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVAAFPHSNIGLELASVL 163

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFT Q WNMTFS Y S   +P+DL+E S    L  WQ+F  L VP SM GL+WN MMS 
Sbjct: 164 LIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEVPSSMIGLIWNSMMSW 223

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++ASE  V+GD    LPG+GSY+  A    D +A+   + T++ +I L +   +
Sbjct: 224 AGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGLGTLIVLIILINFFFW 283

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP++ W++KF+LE  +   P  S VL L R +     +       F PL + +  L   L
Sbjct: 284 RPLVAWADKFKLELGSEADPPTSPVLSLLRHSAL---VAGIQARIFRPLGDLLAGLLNRL 340

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +     E  L          +L++FW   + GV     W  +  ++ H ++     + 
Sbjct: 341 QPLPSVQQERMLTRKKGLDAGRLLNVFWLLCLLGVVGWGLWNMV-VLLAHISFAGWGRLF 399

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T  R +  ++I     +P+G+ IG  P  S ++QP  Q++A+ PA  FFP+++  
Sbjct: 400 IAAGATWLRTLAALLIGVAWTLPLGVAIGLSPRWSKRLQPVVQVVASIPATAFFPILLPL 459

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       +L   +LM+ GTQWY+LFNVIAGA A PND KE A+++ +TGWR WR +ILP
Sbjct: 460 LVSLPGGLSLAAIVLMLLGTQWYVLFNVIAGAMAIPNDLKEAATTYQVTGWRRWRVLILP 519

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           GIFPY VTG +TA GGAWNASIVSE   +    ++T GLGA IA +    +F  ++   L
Sbjct: 520 GIFPYLVTGLLTASGGAWNASIVSEYVQFNAHTVQTVGLGAEIAAAATANNFALLLAATL 579

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +M  FV+ +NR LW  LY    R   L
Sbjct: 580 LMAAFVVVINRLLWKRLYALAERRYTL 606



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 8/264 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL----YVIWLG 383
           P    +     R    +D+   CVV G+   +   +  ++        +      +    
Sbjct: 29  PTTRREEEEAPRRLGGVDVLIVCVVLGLIALLVVAASRWVAPLTPKVSISLAPNMLPAYA 88

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
             +M R+++  I++ I  +  G +   RP     + P   +L + P   F P VV  +  
Sbjct: 89  GYSMLRMMLAYILSLIFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVA 148

Query: 443 ---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              + ++   L   LL+  G  W + F+    A   P D +E ++  ++  W+ +  + +
Sbjct: 149 AFPHSNIGLELASVLLIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEV 208

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P      +  ++ +  G W   + SE    G    +  GLG+Y+  +   G    + LG+
Sbjct: 209 PSSMIGLIWNSMMSWAGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGL 268

Query: 560 LIMCCFVLALNRFLWHPLYLYGTR 583
             +   ++ +N F W PL  +  +
Sbjct: 269 GTLIVLIILINFFFWRPLVAWADK 292


>gi|206891166|ref|YP_002247994.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206743104|gb|ACI22161.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 570

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 210/568 (36%), Positives = 334/568 (58%), Gaps = 15/568 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D+  F +V+GI++ +++   E   P +    V I L+  ++PQYA ++  R+  A ++S
Sbjct: 17  IDIAVFFIVLGILSFIIYIASEWGTPYE--RTVEINLNPSNIPQYAIQSLARIFFAYILS 74

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L F+  Y   A++S+    +++P+LDI+QSIP+L FL   V+  + L+PGK IG ELA I
Sbjct: 75  LTFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKRIGLELACI 134

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IFT QVWNMTFS Y S+  IP+++ EV + F+ + + KF  L +PFS  GL+WN MMS
Sbjct: 135 LLIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIGLIWNSMMS 194

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++GGWFF++A EM ++ D    LPGIGSYI  A  E ++  ++Y + TM+ +I + D  +
Sbjct: 195 VAGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILLIIILDLFI 254

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
           +RP+IVWS KFR+E        +S+VL LF  + F++ +     N  + +     +    
Sbjct: 255 WRPLIVWSQKFRIETIPPEEERESFVLNLFSGSIFIKKVVDLLNNTINKVEKLSYRKFSL 314

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
            G    +            R+S ++ I    ++  V I    ++ G +V++ ++ D++ +
Sbjct: 315 SGNPVVN------------RLSKIMGIISLIIILLVIIWAILKAAG-LVSNISFNDIITI 361

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I     ++ RV V ++IA +  +PVG++IG  P  +  +Q   Q+ A+ PA   FP+++ 
Sbjct: 362 IKAAFYSLLRVFVALLIALVWTLPVGVYIGLNPRAAKILQSIVQIAASVPATAVFPVILL 421

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +       ++    LM+ GTQWY+LFN+IAGASA P D  E++ ++ + G R W+ +IL
Sbjct: 422 FLIKLGGGLDIGAIFLMLLGTQWYLLFNIIAGASAIPKDLIEISRAYGVKGIRKWKTLIL 481

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PGIFPY VTG ITA GGAWNA+IVSE  S+G   + T GLGA I++S+  G+F  ++L  
Sbjct: 482 PGIFPYLVTGLITASGGAWNATIVSEYVSFGGEIMHTAGLGALISQSSASGNFGLLLLST 541

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             M   V+ +NR LW  L++       L
Sbjct: 542 CFMSLTVVGINRLLWKRLFILAKTKYVL 569


>gi|218885906|ref|YP_002435227.1| binding-protein-dependent transporters inner membrane component
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756860|gb|ACL07759.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 576

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/585 (35%), Positives = 312/585 (53%), Gaps = 13/585 (2%)

Query: 4   YNILPPFISRRIFPNIF-DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
              +    +R+  P  + D+   + V G++ +   GI      R       I+L    LP
Sbjct: 3   QQRIFASATRQEEPTRWLDVFGLLFVAGVLGL---GIWFALAHRHAAAGPDISLAPGMLP 59

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +YA+ +  RM  A ++S+LF+  Y TLAA+SRR G VL+ +LDI+QS+PIL FL   ++ 
Sbjct: 60  RYAAYSVGRMFMAYLLSMLFSLGYGTLAARSRRAGPVLLAVLDILQSVPILSFLPVVLLS 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              + P + +  E A++  IFTSQ WN+TF+ YQ+   +P DL E    +R+  WQ+F  
Sbjct: 120 LSAVLP-QAVAVEAASVVLIFTSQAWNITFAWYQAQTTLPGDLREAVSGYRMGAWQRFRT 178

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +PF+   L+WN +MS +GGWFF++A+EM  VG     LPG+GSY+  A   +D  AIL
Sbjct: 179 LDLPFAGVSLLWNSIMSWAGGWFFLMAAEMFTVGSRDFRLPGLGSYLQEAAAREDTPAIL 238

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
             + TM+ VI   DQL++RP++ W  +F+L         +SW L L R    +  +    
Sbjct: 239 MGLGTMMVVIVTLDQLVWRPLLAWGERFKLTMVAEDEQPESWFLDLLRAARRMAPVRALL 298

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
               +P +  +         +   FP +   +   +   +   +F   +   VA G+ W+
Sbjct: 299 ERVLAPAAEGMD------AWLIRRFPPSGESMDVVRHDPWAGRLFGVLLFGCVAFGL-WK 351

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
             G ++     +    ++     T  RV+  + +A    +PVG+ IG    ++  +QP  
Sbjct: 352 GSGLLLQ-VAPESWRDIVIGIAATFLRVMAAMAVALAWTLPVGVLIGTNARLARVLQPVV 410

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+ A+ PA   FP+ +  +       N    LLM+ GTQWY+LFN+IAGAS+ P D K+ 
Sbjct: 411 QIAASIPATALFPVFLMVLVDVTHGLNAAAVLLMLLGTQWYLLFNIIAGASSIPRDLKDT 470

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A+   ++  + WR +ILP +FPY VTGAITA GGAWNASIVSE  S+G   L  TG+GA 
Sbjct: 471 AALIGLSRAQRWRTLILPALFPYIVTGAITASGGAWNASIVSEYVSFGGRTLSATGIGAI 530

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           IA +T +G FP +  G L M   V+  NR +W  LY       R+
Sbjct: 531 IARATAEGDFPLLFAGTLSMIVTVVGFNRLVWRRLYRLAEERFRM 575


>gi|307152632|ref|YP_003888016.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982860|gb|ADN14741.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 578

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 199/534 (37%), Positives = 296/534 (55%), Gaps = 8/534 (1%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  ++  LP Y ++T LRM  A  +SL FT VYA  A +S     +L+P+LDI+QSIP+L
Sbjct: 52  INTNLSELPSYTAQTLLRMTVAYFLSLGFTLVYAYTAYRSAVAAQILLPLLDILQSIPVL 111

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            FL   V+  + L+PG+ IG E+AA+  IFT   WNMTFS YQSL NIP++L E +R +R
Sbjct: 112 SFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMTWNMTFSFYQSLSNIPKELLEAARIYR 171

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ WQ+FW L +P    GLVWN +MS++GGWFF++A E   +G     LPG+GS++A A 
Sbjct: 172 LNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFLIAIESFTLGKRSFRLPGLGSFLAKAA 231

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            E +  AI + ++ ++GVI L D L++RP+I W  +F+ E  T      S VL   R++ 
Sbjct: 232 DEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWVERFKFEMVTSENAPQSEVLDFLRRSP 291

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            LR     S     P   NV    R L      F            +    +  +     
Sbjct: 292 TLRAF---SQQILQPFWQNVD---RGLNQTLTRFSRRSFS-GKTSSLGRWFNGLFVSGFA 344

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            + I   W+++  ++      D   ++     +  RV+  +I++ +  +PVG+ IG  P 
Sbjct: 345 FIVIWGTWEAV-LLLRTLDLSDWRQLMIGAIESALRVMTALILSLLWTVPVGVAIGRNPK 403

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           ++  +QP  Q++A+ PA   FP+++  ++       +    LM+ GT WYILFNVIAGA 
Sbjct: 404 LAQILQPIVQIVASVPATALFPVLLLFLARLGGGLQIGSVALMMLGTMWYILFNVIAGAQ 463

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P++  E A  + ++    W+ +ILPGIFPY +TG ITA GGAWNASIVSE   +    
Sbjct: 464 SIPSELFEAAKIYKLSLIERWQTVILPGIFPYLITGIITAVGGAWNASIVSEYVHFQGHT 523

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           L TTGLG  I+ +T  G+FP ++    +M   V+  NR +W  LY       +L
Sbjct: 524 LTTTGLGETISVATASGNFPLLLAATGVMSLLVVLTNRLVWRRLYQLAQEKYQL 577


>gi|206900627|ref|YP_002250486.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12]
 gi|206739730|gb|ACI18788.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12]
          Length = 570

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 199/567 (35%), Positives = 318/567 (56%), Gaps = 10/567 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F L   ++++ I +I+       T+     +++ + L    LP Y+  + LRM+ A  I
Sbjct: 13  RFSLGDIIILLFIGSIIYAISSLNTIYSKPTEVISLDLSPQKLPLYSLFSLLRMILAYFI 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FT VYA  AA  + L  +L+P+LDI+QSIP+L FL    +  ++++PG  +G E+ +
Sbjct: 73  SLIFTIVYAYTAAYKKSLEKILIPLLDILQSIPVLSFLPPVFMAVISMFPGSKLGLEITS 132

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  IFT QVWNM FS YQSL +IPRDL+E ++ F+L+ WQ+FWYL +P+S  GL+WN MM
Sbjct: 133 IILIFTGQVWNMVFSFYQSLISIPRDLKEAAQLFKLNPWQRFWYLELPYSAIGLIWNSMM 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S +GGWFF++A EM  + +    LPG+GSY++ A  + DLL I Y +  ++ VI L DQL
Sbjct: 193 SWAGGWFFLMACEMFTLTNQNFVLPGLGSYLSFAALKGDLLKIFYGLFALITVIILLDQL 252

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           ++RP++ WS KF++E        +S VL  +R++     +         PL   ++ L  
Sbjct: 253 VWRPLLSWSQKFKVEYVQAEEYYESKVLLWYRRSRIFDLL---YKKIILPLRERLEILFI 309

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +         +   Q     ++S +L++     +    +   +  +  ++ +        
Sbjct: 310 SYY------DKKEKQEIKTSKISKLLNLI-VSTILIFLVLRGFIGLLKLIINLPLNMWKD 362

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+   +T+ RV   ++IA    +P+G+ IG  P +S  IQP  Q++A+ PA   FP++V
Sbjct: 363 IIYSAFLTLLRVTTAVLIALSWTLPLGVRIGMNPKLSKVIQPIVQIVASVPATAIFPVIV 422

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +       N+   +LM+ GTQWY+LFN+IAG  + PND  EV+    ++    W+ +I
Sbjct: 423 MYLINLPGGLNIASIVLMLLGTQWYLLFNIIAGGMSIPNDLIEVSELLKLSKIDKWKILI 482

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P I P+ VTG ITA GGA+NASIVSE   + +   +  GLGA I E++ KG+   +   
Sbjct: 483 IPSILPFLVTGGITAMGGAFNASIVSEYIEFHNQIYKIKGLGALITEASSKGNNSLLAAS 542

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
            L+M   V+ +NR  W  L+      L
Sbjct: 543 TLVMALIVVTINRLFWKRLFKKSEELL 569


>gi|220909907|ref|YP_002485218.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
 gi|219866518|gb|ACL46857.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
          Length = 578

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 200/567 (35%), Positives = 322/567 (56%), Gaps = 10/567 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  + ++ ++  +++   + T   +    + I L   SLP Y +RT LRML A ++SL
Sbjct: 21  DGLIVLSIVALVFAIINTAAKFTGNYNP--NLNIDLSPASLPSYTARTLLRMLVAYLLSL 78

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            F+  YA LA  ++    +L+P+LDI+QSIP+L FL   V+  + L+PG+ IG ELA+I 
Sbjct: 79  GFSLGYAYLAFYNKVAERILLPLLDILQSIPVLSFLPGVVLALIALFPGQQIGVELASII 138

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFT   WNMTFS YQSL  +P++L EV++ +RLS WQ FW + +P  + GL+WN +MS+
Sbjct: 139 LIFTGMAWNMTFSFYQSLTGVPKELREVAQIYRLSWWQNFWTVDLPAGVIGLIWNSVMSV 198

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGWFF++A E   +G+    L G+GSY+  A    +  A+ Y ++ ++GVI L D L++
Sbjct: 199 AGGWFFLIAIESFTLGNRSFKLAGLGSYLGTAANAANYAALTYGLIVLIGVIILIDLLIW 258

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP+I W  KF+ +         S+VL   R++  LR +     N F+PL   + +   T 
Sbjct: 259 RPLIAWGEKFKFQLVEAENVPQSFVLDFLRRSPTLRALHL---NLFTPLQETIDRQFATT 315

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                       +  S+ + +  ++         + +  +W+++  ++   ++ D   V+
Sbjct: 316 PASTLPIS----RAKSSPKFNQWVNRLLLGGFAFIVLWGSWEAL-LLLRVLSWADWQTVM 370

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T  RV+V + ++ +  +PVG+ IG  P +S  +QP  Q+ A+ PA   FP+++  
Sbjct: 371 LGAILTTIRVLVALALSLLWTVPVGVAIGRSPRLSQLVQPIVQIAASVPATALFPVLLLA 430

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++       +   LLM+ GT WYILFNVIAGA A P +  E A+ + ++  + WR +ILP
Sbjct: 431 LANVGGGLQIGSVLLMMLGTMWYILFNVIAGAQAIPTELLEAATVYQLSWSQRWRTVILP 490

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           GIFPY +TG ITA GGAWNASIVSE   + +    T GLG+ I++++  G+FP ++   +
Sbjct: 491 GIFPYLITGIITAVGGAWNASIVSEYVEFRNQTETTLGLGSIISKASAAGNFPLLLASTV 550

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587
            M   V+  NR +W  LY       +L
Sbjct: 551 TMSLLVVLTNRLVWRRLYRLAQNKYQL 577


>gi|223937549|ref|ZP_03629452.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
 gi|223893712|gb|EEF60170.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
          Length = 572

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 198/570 (34%), Positives = 311/570 (54%), Gaps = 14/570 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  DL   V ++ +I  +    +E +    +  +  I LD+  LP Y   +  R + A V
Sbjct: 15  SWVDLAVLVGLVAVIYGITAVAREWSG--QLQPVAEIHLDLRYLPLYTLFSLTRGVIAYV 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS  FT  Y  +AA+ +    V++P+LDI+QSIP+LGFL   V+  ++L+P + +G E+A
Sbjct: 73  ISFFFTMTYGYVAARVKGSERVMLPMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLEIA 132

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           ++  IFT QVWNMTFS Y SL ++P +L  V+R  +L+ WQ+F  L + ++  GLVWN M
Sbjct: 133 SVLMIFTGQVWNMTFSFYYSLKSVPEELNAVARLSKLTWWQRFLRLDLSYAASGLVWNSM 192

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SM+GGWFF+  SE  V+G     LPG+GSY++LAI++ ++ A +  ++ M  +I   DQ
Sbjct: 193 LSMAGGWFFLTVSEAFVLGSHDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFLDQ 252

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           L++RP++ WS KF  E  +     +SW+    R++             + P   ++ KL 
Sbjct: 253 LVWRPVVAWSQKFSDEDASTRGGTESWLWDRVRRSRL-----------WGPFVRSLSKLL 301

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
                +              +  + +L  F+       AI    +    +    +  D  
Sbjct: 302 PRANKMLSAGLPQPQSRSQKRVFAQILKWFFVIAALSGAIFAGIKYFQLLH-SLSKADWK 360

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    +T  RV+  + +AS+  IPVG+ IG  P  S  +QP  Q++A+FPA + FP+V
Sbjct: 361 SILLSTAMTFGRVIAAVALASLWTIPVGVMIGRNPRWSRAMQPIIQMVASFPAPMLFPIV 420

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V+ V        +    L++ GTQWY+LFNVI+G+SA P +  EV+    ++    WR +
Sbjct: 421 VALVLSLGGGLGIGSVFLLLLGTQWYVLFNVISGSSAIPRELWEVSRLKRLSLSARWRKL 480

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPGIFP  +TG ITA GGAWNASIV+E   +    L T GLGA I+++T++G F  +  
Sbjct: 481 ILPGIFPSLLTGWITAMGGAWNASIVAEYMKYKGQTLSTIGLGALISQATDEGRFALLGA 540

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            V +M   V+ +NR +W PL         L
Sbjct: 541 AVGVMSFTVVLVNRLVWRPLTHQAQTRYSL 570


>gi|238027857|ref|YP_002912088.1| ABC transporter permease [Burkholderia glumae BGR1]
 gi|237877051|gb|ACR29384.1| ABC transporter, permease protein [Burkholderia glumae BGR1]
          Length = 573

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 192/580 (33%), Positives = 304/580 (52%), Gaps = 17/580 (2%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F  RR      D++  V  +           +   P    +   + L   +L  Y+ RTT
Sbjct: 6   FPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPAS--ENPAVALAPANLLYYSMRTT 63

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R L  MV S LF+ V+  LAA+   +  V++P ++ M+S+P++GF+TFT  +F+ LYP 
Sbjct: 64  MRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGLYPH 123

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +G E  AIFA+FT Q WNM  ++YQ++  +P++L EV+ SFR + WQ+FW L  P+S+
Sbjct: 124 NTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFRYNAWQRFWRLEWPYSV 183

Query: 190 PGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           PG +WN + S +  WF +VASE I       + LPG+GSY+++A+      A++YA++ +
Sbjct: 184 PGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYALIAL 243

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIY--PADSWVLYLFRKTNFLRFIGYSSWNFF 306
           +  I + DQ +FRP++ ++ +F+ + +         SW       +   R  G       
Sbjct: 244 VLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLAQL- 302

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
              +  +  L R    +R       L      R +++    W+  +        +Q   Y
Sbjct: 303 --ANAWIFGLPRVWYALRIDCLTRLL-----ARANWLWSTIWYFALTVGCAYGGYQLWQY 355

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +      QD+  + W    T  RV + ++++ ++++P+G+W+   P   +  QP AQ+LA
Sbjct: 356 VPK----QDLAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRLTWCQPVAQVLA 411

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P N+++PL+   V   H +   W   +++ GTQWY LFN IAG  A P    EV+  F
Sbjct: 412 AIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIF 471

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           H+ G  WWR  +LP IFPY VTG I+A GGAWNA+I +E+  WG     T+GLGA+I+ +
Sbjct: 472 HLKGAMWWRKYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTT 531

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T  G      LG   MC  V     F+W PLY +  R  R
Sbjct: 532 TANGDHAAAALGCTAMCSMVALCIMFVWQPLYRFAERKFR 571


>gi|219847812|ref|YP_002462245.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
 gi|219542071|gb|ACL23809.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
          Length = 583

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 202/542 (37%), Positives = 288/542 (53%), Gaps = 15/542 (2%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
             V    I L + +LP YA R+  RM  A  +S LFT +Y  +AA + R   VL+P+LD+
Sbjct: 55  ATVQGPAIDLSLSALPFYALRSVGRMALAYALSFLFTMIYGYIAAYNARAERVLIPLLDV 114

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +QS+PIL FL   ++    + P + +  EL A+  IFTSQVWNMTF+ YQSL  IPR+L 
Sbjct: 115 LQSVPILSFLPVVLLSLSTVLP-EALAVELTAVVLIFTSQVWNMTFAWYQSLTTIPRELR 173

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E S  FR S WQ+F  L  PF    LVWN MMS +GGWFF++A+E+  +G+    LPG+G
Sbjct: 174 EASSIFRFSRWQRFTTLEFPFGALALVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLG 233

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT-GIYPADSWV 285
           +++  A    DL AI + +LT++ VI + DQ ++RP++ W+ +FRLE        A SW 
Sbjct: 234 AFLQTAANAGDLTAIGWGILTLVAVIVILDQFVWRPLLAWAGQFRLEMIERDDEEAQSWF 293

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
             L R++    +IG         +   + +       +             +        
Sbjct: 294 YDLIRQSVVAGWIGGLMGAIDRMIMRRLSRGPAPDPYL-------------SGSTRRSWW 340

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            +   VV  V +G        ++          +      TM RV   + IA +  +PVG
Sbjct: 341 GWVLVVVSVVLVGWGGWVGSGLLLSVPLVQWGAIALSVGATMARVATAMTIALLWTVPVG 400

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           ++IG RP  ++ +QP  Q+ A+ PA   FP++V          NL   LLM+ GTQWYIL
Sbjct: 401 VFIGTRPRAAAILQPIVQIAASVPATALFPVLVLAFLALPGGLNLAAVLLMMLGTQWYIL 460

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           FNVIAGA+A P D +  +    + GW+ WR +ILPG+FPY VTG ITA GGAWNASIV+E
Sbjct: 461 FNVIAGAAAIPQDLRFTSELLQLRGWQRWRTLILPGLFPYLVTGLITASGGAWNASIVAE 520

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              +     +T G+GA IA +T  G F  +    L M   V+ +NR +W  LY       
Sbjct: 521 YVVFNQQTYQTIGIGAQIAVATADGDFAGLFAATLAMIVAVVTINRLVWRRLYRLAETKY 580

Query: 586 RL 587
           R+
Sbjct: 581 RM 582


>gi|217967159|ref|YP_002352665.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
 gi|217336258|gb|ACK42051.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
          Length = 570

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 197/567 (34%), Positives = 305/567 (53%), Gaps = 10/567 (1%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F     ++++ I +I+       T+     +I+ + L    LP Y+  + LRM+ A  I
Sbjct: 13  RFSFGDIIILLFIGSIIYAISSLNTIYSKPTEIISLDLSPQKLPLYSLFSLLRMIFAYFI 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+FT VYA  AA  + L  +L+P+LDI+QSIP+L FL    +  + ++PG  +G E+ +
Sbjct: 73  SLVFTIVYAYTAAYKKSLEKILIPLLDILQSIPVLSFLPPVFMAVIAMFPGSKLGLEITS 132

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  IFT QVWNM FS YQSL +IP+DL E +   +L+ WQ+FWYL +P++  GL+WN MM
Sbjct: 133 IILIFTGQVWNMVFSFYQSLISIPKDLREAASLLKLNPWQRFWYLELPYAAIGLIWNSMM 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S +GGWFF++A EM  + +    LPG+GSY++ A  + DLL I Y +  ++ VI L DQL
Sbjct: 193 SWAGGWFFLMACEMFTLTNQNFVLPGLGSYLSFAALKGDLLKIFYGLFALITVIVLLDQL 252

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           ++RP++ WS KF++E         S VL  +R++    F+         PL   ++    
Sbjct: 253 VWRPLLAWSQKFKVEYVQAEGYYSSRVLLWYRRSRIFDFL---YKKVIFPLREKLENFFV 309

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                R         +         L I    ++    +   +  +  ++          
Sbjct: 310 LYYNKRGTQEGKASIVSK-------LFITLISLITIALVLRGFIGLLRLIITLPLPMWKN 362

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+   +T+ RV   ++IA    +P+G+ IG  P +S  IQP  Q++A+ PA   FP++V
Sbjct: 363 IIYSALLTLLRVTTAVLIALSWTLPLGVRIGMNPKLSRLIQPVVQIVASVPATAIFPVIV 422

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +       N+   +LM+ GTQWY+LFN IAG  + PND  E+++   ++    WR +I
Sbjct: 423 MYLINLPGGLNIASIILMLLGTQWYLLFNTIAGGMSIPNDLIEISALLKLSKIDRWRILI 482

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP I P+ VTG ITA GGA+NASIVSE   + +   +  GLGA I E++ KG    +   
Sbjct: 483 LPSILPFVVTGGITAMGGAFNASIVSEYIEFQNQIYKIKGLGALITEASSKGDNALLAAS 542

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
            L+M   V+ +NR  W  L+      L
Sbjct: 543 TLVMAIMVVTINRLFWKRLFKKSEELL 569


>gi|295696444|ref|YP_003589682.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295412046|gb|ADG06538.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 569

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 231/569 (40%), Positives = 337/569 (59%), Gaps = 15/569 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             D      V+G++  ++   +    P      + ++LD  +LP YA R+ +RM  A+  
Sbjct: 14  WVDAALLAGVLGLLYGIVQVGKGMVEPYAP-QSMTVSLDPSALPYYAGRSLMRMFVALGA 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++FT +YA LA++SR    +L+P+LDI+QS+P+LGFL+ TVV FM L+PG ++G ELA+
Sbjct: 73  SVVFTVLYARLASRSRLGERILIPLLDILQSVPVLGFLSVTVVGFMALFPGSLLGPELAS 132

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFAIFT QVWNMTF  YQS+  +P++L E SR + L G ++F+ L + +    LVWN MM
Sbjct: 133 IFAIFTGQVWNMTFGFYQSITGVPKELREASRLYGLGGVRRFFVLDLAYGAVPLVWNSMM 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S  GGWFF+  SE I V    I LPGIGSY+A A+   D+ A+LYAM+TM+ VI + DQL
Sbjct: 193 SFGGGWFFLAVSESITVMHRDIRLPGIGSYMAAAMDAGDVRALLYAMVTMVIVIIVVDQL 252

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
            +RP++ W+ +F++E+T G     SW+L L R+++   +       FF P          
Sbjct: 253 FWRPLVAWAQRFKVEQTAGPDLPTSWMLTLLRRSHIAEWARRV---FFEP---------- 299

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
               +    P    ++        ++    +  V  VA+    +  G ++    ++++ +
Sbjct: 300 AWLWMIAGRPPRAPRMRMPSVAKKVVSAVIWAAVFVVAVYWIIRG-GLMLRELGWRELFF 358

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +  G +T+ RV   +++ ++  IPVG+WIG  P  S   QP   + A+FPAN+FFPL+ 
Sbjct: 359 PVLYGVLTLLRVAAAVLLGALWTIPVGVWIGTHPKWSRVAQPVVLVAASFPANMFFPLIT 418

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +     H++       LM+ GTQWYILFNVIAGASA P D +E +    + GWR WR +I
Sbjct: 419 AAFLSLHVSLEWGSVALMMLGTQWYILFNVIAGASAIPGDLREASDLMRLGGWRRWRLLI 478

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP IFP  VTG +TA GGAWNASIV+EV SW    L  TGLGAYI  +T  G +P +V G
Sbjct: 479 LPVIFPSLVTGLVTAAGGAWNASIVAEVVSWKGTQLAATGLGAYITRATTNGDWPAIVWG 538

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++M  FV+A+NR LW  LY       RL
Sbjct: 539 IVVMAAFVVAVNRLLWRRLYRLAENRYRL 567


>gi|86160237|ref|YP_467022.1| ABC transporter inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776748|gb|ABC83585.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 579

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 208/579 (35%), Positives = 307/579 (53%), Gaps = 15/579 (2%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F+ R       D+     + G +  L+    E T        V I L + +LP Y   +
Sbjct: 14  AFLDRSRRIGWTDVALAAGLGGAVYGLVRLAGEWTG--APRPAVEIDLSLGALPGYTLLS 71

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L+A V+SLLFT  Y   AA+ R    VLVP LDI+QSIP+LGF+   V+  +  +P
Sbjct: 72  LSRGLAAYVLSLLFTLAYGYWAARDRIAERVLVPALDILQSIPVLGFMPGLVLGLVAAFP 131

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G  +G ELAA+  IFT Q WNMTFS Y SL +IPRDL EV+   R   WQ+F ++ +PF 
Sbjct: 132 GSNVGLELAAVVMIFTGQAWNMTFSFYHSLKSIPRDLTEVATLSRFHWWQRFRWVELPFG 191

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
             GLVWN MMSM+GGWFF++ SE  V+GD    LPG+GSY+++A+   D  A+  A++ M
Sbjct: 192 AIGLVWNGMMSMAGGWFFLMISESFVLGDKDFRLPGLGSYMSVAVAHGDGGAMFAAVVAM 251

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
             +I   DQLL+RP++VW+ KFR+E +      +SW L   R++  L +           
Sbjct: 252 ASMIVAVDQLLWRPVVVWAQKFRVEESGQTEAMESWFLDFLRRSRLLPW----------- 300

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
            S  +++  RT+               + +R           V     +G +   + +++
Sbjct: 301 ASGLLRRAVRTVSSTPRPP--PRSAPRAGRRSLAGAVSLALFVALLALLGWSAVGLVHLL 358

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +     +     +T+ RV++   + ++  +P G+ IG  P +S  +QP  Q++A+F
Sbjct: 359 RRVPFGAWAGIGAAATLTLGRVLLATALGTLWTVPAGLAIGLSPRLSRILQPVVQVVASF 418

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA + FP VV+ ++   +       LLM+ GTQWYILFNVIAGA+A P D +E A  + +
Sbjct: 419 PAPMLFPAVVAVLAAAGVGLGWGSILLMLLGTQWYILFNVIAGATAIPADLREAARVYRV 478

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              + +R + LP +FPY VTG +TA GGAWNASIVSE  S+    L T GLGA I+ +  
Sbjct: 479 GTLQRFRDLYLPAVFPYLVTGWVTAAGGAWNASIVSEYMSFRGRVLATDGLGARISHAAA 538

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            G    +   + +M   V   NR +W  L+        L
Sbjct: 539 SGDLAVLAAAITVMAALVAIFNRLVWRRLHGVAEERFSL 577


>gi|209522523|ref|ZP_03271110.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209497040|gb|EDZ97308.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 402

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 205/409 (50%), Positives = 280/409 (68%), Gaps = 8/409 (1%)

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L
Sbjct: 1   RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            AI + +L M  VI  YDQLLFRP++ W++KFR+E T+     +SW+L L R+T  +  +
Sbjct: 61  HAIGWVILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLIRRTRLIHRL 120

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
                   +  +  V+         RFH P+       +++ S + DI W  +V    + 
Sbjct: 121 LVPLGWMLARAAR-VRFQLPAFSAPRFHIPQ-------SEKSSKLGDIIWAAIVLLATVY 172

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           + ++   Y+    +  ++ +V  LG IT+ RVV+LI IAS+IW+P+G+ IG RP ++ K+
Sbjct: 173 VVYRVFLYVRTGVSMDEIGHVFVLGLITLLRVVLLIAIASVIWVPIGVLIGLRPALAEKV 232

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           QP AQ LAAFPAN+ FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGAS++PND
Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPND 292

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           ++E A++FHI GW+WWR ++LPGIFPYYVTGAITA GGAWNASIVSE   WG   +   G
Sbjct: 293 YREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGAYIA++T  G FP++++G+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 353 LGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 401



 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 4/201 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR++  + I+ +       L      L   + P+   + + P        V+  +  +
Sbjct: 200 TLLRVVLLIAIASVIWVPIGVLIGLRPALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFH 259

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +  ++     I     W + F++     + P D  E + +F + GWQ +  + +P 
Sbjct: 260 ----LNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAATNFHIRGWQWWRQVMLPG 315

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P  V   + +  G W   + SE +  GDT +   G+G+YIA      D   I+  +  
Sbjct: 316 IFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHGLGAYIAQTTAAGDFPKIIVGIAV 375

Query: 248 MLGVIFLYDQLLFRPMIVWSN 268
           M   + L+++LL+RPM  ++ 
Sbjct: 376 MSLFVTLFNRLLWRPMYAYAE 396


>gi|209521906|ref|ZP_03270577.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209497664|gb|EDZ97848.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 402

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 203/409 (49%), Positives = 278/409 (67%), Gaps = 8/409 (1%)

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+  I LPGIG+Y+A AI +++L
Sbjct: 1   RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            A+ + +LTM  VI  YDQ LFRP++ W++KFR+E T+      SW+L + R+T  +   
Sbjct: 61  HAVGWVILTMTVVILAYDQFLFRPLVAWADKFRMETTSSGNAPQSWLLDMMRRTRLIH-- 118

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
                   +P    +    R    I F       +   +++ + + DI W  +V  + + 
Sbjct: 119 -----ELLTPAGVMLATAARIPLRIPFANGRRAGR-ARSEKSTRVGDIVWGILVFMLTVY 172

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           + ++ + Y+    T  +V +V  LG IT+ RVV+LI I+S+IW+P+G+ IG RP ++ K+
Sbjct: 173 VIYRVVSYVRTGVTLDEVGHVFVLGLITLLRVVLLIAISSVIWVPIGVLIGLRPALAEKV 232

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           QP AQ LAAFPAN+ FP+ V  +  +HLNP++WLS L++ GTQWYILFNVIAGA+A+PND
Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATAYPND 292

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           ++EVA++F I GW+WWR ++LPG+FPYYVTGAITA GGAWNASIVSE   WG   +   G
Sbjct: 293 YREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           LGA+IAE+T  G FP+++LGV +M  FV   NR LW PLY +    LRL
Sbjct: 353 LGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFAEARLRL 401



 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 4/201 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR++  + IS +       L      L   + P+   + + P        V+  +  +
Sbjct: 200 TLLRVVLLIAISSVIWVPIGVLIGLRPALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFH 259

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +  ++     I     W + F++       P D  EV+ +FR+ GWQ +  + +P 
Sbjct: 260 ----LNPDIWLSPLIVLGTQWYILFNVIAGATAYPNDYREVATNFRIRGWQWWRQVMLPG 315

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P  V   + +  G W   + SE +  GDT +   G+G++IA      D   I+  +  
Sbjct: 316 VFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHGLGAFIAETTAAGDFPKIILGVAV 375

Query: 248 MLGVIFLYDQLLFRPMIVWSN 268
           M   + L+++ L+RP+  ++ 
Sbjct: 376 MSLFVTLFNRTLWRPLYAFAE 396


>gi|325525200|gb|EGD03069.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 421

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 197/432 (45%), Positives = 263/432 (60%), Gaps = 12/432 (2%)

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q+L  +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I V
Sbjct: 1   QALRTVPLDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNAMMSMSGGWFFVVASEAIAV 60

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
           G+  + LPG+G+Y+A AI  +DL A+ +A++ M   I LYDQLLF P++ WS +FR    
Sbjct: 61  GNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYDQLLFGPLVAWSERFRYGDA 120

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
                + SW+L LF ++ ++              +    +   +    R   P       
Sbjct: 121 APTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARLRGFMSAWRDRIVLPPRT---- 176

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
                    D+ WF +        A++         T+ D+  V   G +T  RV VL+ 
Sbjct: 177 --------GDVLWFALCGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTVLVT 228

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +AS+IW+P+GI IG RP ++++IQP  Q LAAFPAN+ FP+ V  +    L P++WL  L
Sbjct: 229 LASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRLRLEPDIWLCPL 288

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           MI G QWY+LFNVIAGASAFP D +E A+ F +    WWR+++LPG+ PY+VTGAITA G
Sbjct: 289 MILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASG 348

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           GAWNASIV+E  SWG   L   GLGAYIA  T+ G +P + LGV +M   V+A NR +W 
Sbjct: 349 GAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWR 408

Query: 576 PLYLYGTRCLRL 587
           P+Y +  R  RL
Sbjct: 409 PMYAFAERRTRL 420



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 88/242 (36%), Gaps = 7/242 (2%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLSAMVISLLFTFVYA 87
           ++   L G        ++  +   TL    L         T +R+   + ++ +      
Sbjct: 179 VLWFALCGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIG 238

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
                   +   + P+   + + P        V   + L     +  ++     +     
Sbjct: 239 IAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRL----RLEPDIWLCPLMILGAQ 294

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P DL E +  FR+     + ++ +P  +P  V   + +  G W   
Sbjct: 295 WYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASGGAWNAS 354

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + +E +  G T +   G+G+YIA      D   I   +  M  ++   ++L++RPM  ++
Sbjct: 355 IVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWRPMYAFA 414

Query: 268 NK 269
            +
Sbjct: 415 ER 416


>gi|227518311|ref|ZP_03948360.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
 gi|227074232|gb|EEI12195.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
          Length = 590

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  V +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIVGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIVFVWQPLYRAAKQKF 588


>gi|281492278|ref|YP_003354258.1| ABC transporter permease [Lactococcus lactis subsp. lactis KF147]
 gi|161702115|gb|ABX75585.1| ABC transporter, permease protein [Lactococcus lactis subsp. lactis
           KF147]
          Length = 599

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/576 (33%), Positives = 310/576 (53%), Gaps = 19/576 (3%)

Query: 15  IFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           I   I  L AF+L++  I I        +    D V  +   L + +L  ++ RT  RM+
Sbjct: 36  ILIGIICLFAFILIVTQITINQPLSSLPSQSSVDDVKKMHDFLSIGNLAYFSMRTMFRMI 95

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             M+ S+LF+ +   LA K +    +++P+++ ++S+P+LGF+TFT  + + LYP  V+G
Sbjct: 96  VGMMWSILFSVICGVLAIKFKTARRIILPMVNFLESVPLLGFMTFTTAFLLGLYPNNVMG 155

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AE  AIFA+FT Q WN+  S+YQ +  +P+DL+EV+  FR S W+KFW L   +S+PGL+
Sbjct: 156 AEALAIFAVFTGQAWNIMLSLYQIMEVVPKDLKEVTSQFRYSAWEKFWRLEFVYSIPGLL 215

Query: 194 WNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           WN+++S S  WF +VASE + V       + LPGIGSYI +A+   D  A  +A++ ++ 
Sbjct: 216 WNLVISQSAAWFAIVASEQVTVAIPKSETLILPGIGSYIQVALDRADFKACGFAVIALII 275

Query: 251 VIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            + + + L+F+P++  +  +R +  TT   P  S V  L + +NF + +           
Sbjct: 276 NVVILNFLVFQPLVKATYYYRYDEGTTQGNPPKSIVYNLVKASNFGKILMKWIQKIKDF- 334

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
              + KL R   ++R +    +L      +V   + I W+ ++    +  A +   ++  
Sbjct: 335 --WIFKLPRVWYILRINLIFKYLG-----KVKKYISIIWYILLGYAVVISAIKLYRFL-- 385

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              ++D   +  L  +T  RVV+ ++IA+ I+ P+G+W+       S IQP  Q++ + P
Sbjct: 386 --PHEDFSIIPHLMLLTTLRVVLAMLIAAAIFTPLGVWVASNKRRLSFIQPIGQVVGSIP 443

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +NV+ P +V  +S  +     W+  L++ G QWY  FNVIAG  A P+D KEV   F ++
Sbjct: 444 SNVYTPFIVIFISLGYKQLEWWILPLIMVGCQWYYFFNVIAGYLAIPDDIKEVTKIFPLS 503

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++WW   ++P +FPY +T  I A G AWNA I +E   WG   +  TGLG YI  +   
Sbjct: 504 KFKWWTRYLIPSMFPYLITAIINAAGAAWNADIAAESLQWGKETINVTGLGQYI--AVND 561

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G   +  LG L MC  V     F+W PLY Y     
Sbjct: 562 GIKDKSALGTLAMCAVVGLCIIFVWQPLYKYAREKF 597


>gi|312952925|ref|ZP_07771782.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310629121|gb|EFQ12404.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|315153623|gb|EFT97639.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
          Length = 590

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRTAKQKF 588


>gi|315151513|gb|EFT95529.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
          Length = 590

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  V +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIVGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|255973271|ref|ZP_05423857.1| ABC transporter permease [Enterococcus faecalis T1]
 gi|255964289|gb|EET96765.1| ABC transporter permease [Enterococcus faecalis T1]
          Length = 585

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYREAKQKF 583


>gi|256762067|ref|ZP_05502647.1| ABC transporter permease [Enterococcus faecalis T3]
 gi|256683318|gb|EEU23013.1| ABC transporter permease [Enterococcus faecalis T3]
          Length = 585

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|257085682|ref|ZP_05580043.1| ABC transporter permease component [Enterococcus faecalis Fly1]
 gi|256993712|gb|EEU81014.1| ABC transporter permease component [Enterococcus faecalis Fly1]
          Length = 585

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/534 (32%), Positives = 285/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ + L   W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFLKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|227552838|ref|ZP_03982887.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229546263|ref|ZP_04434988.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|229550452|ref|ZP_04439177.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|256852709|ref|ZP_05558079.1| ABC transporter [Enterococcus faecalis T8]
 gi|293382614|ref|ZP_06628545.1| ABC transporter, permease protein [Enterococcus faecalis R712]
 gi|293387504|ref|ZP_06632054.1| ABC transporter, permease protein [Enterococcus faecalis S613]
 gi|307269364|ref|ZP_07550711.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307272307|ref|ZP_07553565.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307275184|ref|ZP_07556332.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307281685|ref|ZP_07561904.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307290727|ref|ZP_07570629.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312899285|ref|ZP_07758621.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312908093|ref|ZP_07767073.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312979014|ref|ZP_07790734.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227178016|gb|EEI58988.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229304432|gb|EEN70428.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|229308624|gb|EEN74611.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|256711168|gb|EEU26206.1| ABC transporter [Enterococcus faecalis T8]
 gi|291080014|gb|EFE17378.1| ABC transporter, permease protein [Enterococcus faecalis R712]
 gi|291083088|gb|EFE20051.1| ABC transporter, permease protein [Enterococcus faecalis S613]
 gi|306498227|gb|EFM67742.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306503916|gb|EFM73135.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508126|gb|EFM77248.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511002|gb|EFM80014.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306514301|gb|EFM82869.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625904|gb|EFQ09187.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|311288193|gb|EFQ66749.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293570|gb|EFQ72126.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315026922|gb|EFT38854.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315033145|gb|EFT45077.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034115|gb|EFT46047.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315146470|gb|EFT90486.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315156438|gb|EFU00455.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315160071|gb|EFU04088.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160897|gb|EFU04914.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315169124|gb|EFU13141.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315171730|gb|EFU15747.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174572|gb|EFU18589.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315575453|gb|EFU87644.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581015|gb|EFU93206.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|327534689|gb|AEA93523.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis OG1RF]
 gi|329577146|gb|EGG58617.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 590

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|307288219|ref|ZP_07568219.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306500817|gb|EFM70136.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|315165381|gb|EFU09398.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
          Length = 590

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 283/534 (52%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F       + K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYGLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|312904784|ref|ZP_07763929.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|310631875|gb|EFQ15158.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|315576827|gb|EFU89018.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
          Length = 590

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  S   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|29375633|ref|NP_814787.1| ABC transporter, permease protein [Enterococcus faecalis V583]
 gi|255976265|ref|ZP_05426851.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256958551|ref|ZP_05562722.1| ABC transporter permease component [Enterococcus faecalis DS5]
 gi|256962353|ref|ZP_05566524.1| ABC transporter permease component [Enterococcus faecalis Merz96]
 gi|256965545|ref|ZP_05569716.1| ABC transporter permease component [Enterococcus faecalis HIP11704]
 gi|257078141|ref|ZP_05572502.1| ABC transporter permease component [Enterococcus faecalis JH1]
 gi|257086411|ref|ZP_05580772.1| ABC transporter permease component [Enterococcus faecalis D6]
 gi|257415672|ref|ZP_05592666.1| ABC transporter permease component [Enterococcus faecalis AR01/DG]
 gi|257418889|ref|ZP_05595883.1| ABC transporter permease [Enterococcus faecalis T11]
 gi|257423026|ref|ZP_05600016.1| ABC transporter [Enterococcus faecalis X98]
 gi|294780797|ref|ZP_06746153.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859648|ref|ZP_07105736.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|29343094|gb|AAO80857.1| ABC transporter, permease protein [Enterococcus faecalis V583]
 gi|255969137|gb|EET99759.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256949047|gb|EEU65679.1| ABC transporter permease component [Enterococcus faecalis DS5]
 gi|256952849|gb|EEU69481.1| ABC transporter permease component [Enterococcus faecalis Merz96]
 gi|256956041|gb|EEU72673.1| ABC transporter permease component [Enterococcus faecalis HIP11704]
 gi|256986171|gb|EEU73473.1| ABC transporter permease component [Enterococcus faecalis JH1]
 gi|256994441|gb|EEU81743.1| ABC transporter permease component [Enterococcus faecalis D6]
 gi|257157500|gb|EEU87460.1| ABC transporter permease component [Enterococcus faecalis ARO1/DG]
 gi|257160717|gb|EEU90677.1| ABC transporter permease [Enterococcus faecalis T11]
 gi|257164850|gb|EEU94810.1| ABC transporter [Enterococcus faecalis X98]
 gi|294452117|gb|EFG20563.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300850466|gb|EFK78215.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|323480296|gb|ADX79735.1| ABC-type anion transport system [Enterococcus faecalis 62]
          Length = 585

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|315030083|gb|EFT42015.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 590

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKFALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|257089467|ref|ZP_05583828.1| ABC transporter permease [Enterococcus faecalis CH188]
 gi|256998279|gb|EEU84799.1| ABC transporter permease [Enterococcus faecalis CH188]
          Length = 585

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  S   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|315145489|gb|EFT89505.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 590

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 69  LSPSNLFYFSIRTMFRMIVEMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588


>gi|257082979|ref|ZP_05577340.1| ABC transporter permease component [Enterococcus faecalis E1Sol]
 gi|256991009|gb|EEU78311.1| ABC transporter permease component [Enterococcus faecalis E1Sol]
          Length = 585

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G QWY  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGT 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  +   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|83589273|ref|YP_429282.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83572187|gb|ABC18739.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 573

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/570 (31%), Positives = 297/570 (52%), Gaps = 7/570 (1%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L   +++  ++    +   +      +     +   +  LP YA R+ LRML A ++SL
Sbjct: 6   NLALTMIMAALLISFAYFAYQGHRVLTLAGGTEVVTSISVLPYYAFRSFLRMLGAYLLSL 65

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +FT  Y   A    R    L+PILDI+QS+PILGF    V +F++L+ G+++G ELA+IF
Sbjct: 66  IFTLTYGYKAGTDTRAERWLIPILDILQSVPILGFFPAAVYFFVSLFQGRLLGVELASIF 125

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFTSQ WNMTF  Y+SL  IPRDL E + ++R++GW++F  L +P  +P LV+N +MS 
Sbjct: 126 LIFTSQAWNMTFGFYESLTTIPRDLLEATVAYRVTGWRRFRTLYLPAGIPKLVYNSIMSW 185

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +GGW+F++A+E+I +G     LPG+GSY+    +  +L   +  +LT++ +I + +  ++
Sbjct: 186 AGGWYFLIAAEIIAIGPVEYSLPGLGSYLIRTTERGELGLTMVGLLTLVALITMMNIFIW 245

Query: 261 RPMIVWSNKFRLERTTGI--YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           RP+  W+  F+ E  +G            L+ +    R I        + L   V  L  
Sbjct: 246 RPLSTWAENFKYEFGSGGSNRLPSGLGYRLWWQAPGFREIRIGVIKGGAFLGRAVGNLGA 305

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L       PE + + C        L  +   ++   A+     ++G +        V  
Sbjct: 306 RLA----PGPEKWQRWCRYLARVERLVAWGLALLLVYALVRGLLALGTLFLEPWQPQVFS 361

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      + FR++   +++    +PV IWIG    +   + P  ++LA+ PA   FP++V
Sbjct: 362 IPAALLFSFFRLMAAYLLSLAWTLPVAIWIGHNERVYEFLTPVFEILASVPATALFPIIV 421

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +       NL   LL++ G QWY+LFN+IAG  + P D KE A++F + GW + R ++
Sbjct: 422 FVLIGLTGGMNLAAILLVLTGMQWYLLFNLIAGVKSIPGDLKEAAAAFGLRGWGYLRRVV 481

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVL 557
           LP + P  +TG+ITA GG WNA IV+E   +        G+G+ +  +T   GSF  +  
Sbjct: 482 LPAMVPSLITGSITAWGGGWNALIVAEYVVYAGHTYTAFGIGSLLDMATYGSGSFQVIWS 541

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            ++ M   ++ +NRF W  LY    R  ++
Sbjct: 542 SLIAMMVTIVLMNRFFWRRLYEMAARRFKI 571


>gi|256618637|ref|ZP_05475483.1| ABC transporter permease component [Enterococcus faecalis ATCC
           4200]
 gi|256598164|gb|EEU17340.1| ABC transporter permease component [Enterococcus faecalis ATCC
           4200]
          Length = 585

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/534 (32%), Positives = 283/534 (52%), Gaps = 18/534 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L  ++ RT  RM+  M  S LF+FV+  LA K +    V++P+++ ++S+P+LGF
Sbjct: 64  LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  + + L+PG V+GAE  AIFAIFT Q WN+  ++YQ +  IP DL  V+  F+ +
Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            W+KFW L   +S+PGL+WN+++S +  WF +VASE   V    +T + LPGIGSYI +A
Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291
           +   D  + L+A+  +L  + + + L+F+P++  +  F+ E       P  S + +L +K
Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               ++   +   F      ++ K+        ++F +         ++ +     W+  
Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  + +  + +   ++     +QD   +  L   T  RV + +++A II+ P+ IW+   
Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               S +QP  Q+L + P+NV+ P +V  +S        W+  L++ G Q Y  FNVIAG
Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQGYFFFNVIAG 471

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+D ++V   F ++ W+WW   ++P I PY +T  I A G AWNA I +E   WG 
Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  TGLG YI  S   G   +  LG L MC  V     F+W PLY    +  
Sbjct: 532 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583


>gi|28378703|ref|NP_785595.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           WCFS1]
 gi|28271540|emb|CAD64445.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           WCFS1]
          Length = 580

 Score =  363 bits (933), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 176/576 (30%), Positives = 300/576 (52%), Gaps = 26/576 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV--------PITLDVHSLPQYASRTTLRML 73
           ++   L IGI+ ++   I +  +P   +              L +  L   A RTT R+ 
Sbjct: 17  MMWLGLSIGILLMIGWCIAKMNLPLSRLPTQGYLDTTGGKDYLTMSHLVAAALRTTTRLF 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             M  S+LF+ ++  LAA+ R    V++PI+++++S+P+LGFLTFT  +FM L+P  V+G
Sbjct: 77  IGMGYSILFSLIFGILAARYRSARYVILPIVNLLESVPLLGFLTFTTAWFMGLFPNNVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E  AIF +FT+Q WN+  ++YQSL   P DL  V++ F  + WQ+FW L   ++ P ++
Sbjct: 137 VEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRLEFLYATPSIL 196

Query: 194 WNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           WN+++S S  WF +VA E   ++V  +  + LPGIGSYI +A+   +  A++ A++ ++ 
Sbjct: 197 WNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGAVINAVIALVI 256

Query: 251 VIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            + L +  +F+P+I  +  ++    T    P  S V  L         +     +     
Sbjct: 257 CVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVKRLHRHIRYWW 316

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
                K  + LG  R              R+     ++W      V     ++    ++ 
Sbjct: 317 LYGAPKQWQKLGFSRII------------RILKKYTVYWRIAWWLVIAVGLYRLGVLLIK 364

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +  + ++  +     +T  RV++ ++++++I+IP+ +W+         IQP  Q+L + P
Sbjct: 365 YLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIP 424

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A+++ P+V   ++      + W+  L++ GTQWY  FN+IAG  A P+D K+V + FH++
Sbjct: 425 ADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLS 484

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GWRWW + ++P +FP ++T  I A G AWNA I +E+ SWG      TGLGAYIA+    
Sbjct: 485 GWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQ--NI 542

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            + P    GVLI+C  V      +W PLY +  R  
Sbjct: 543 NNKPAEATGVLIICVIVGLCVVLIWQPLYRFAERRF 578


>gi|312797025|ref|YP_004029947.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454]
 gi|312168800|emb|CBW75803.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 407

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 187/380 (49%), Positives = 258/380 (67%), Gaps = 8/380 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+IG+I +   G ++T  P   +    I+LD   LP+YA RTTLRML
Sbjct: 23  RLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPEYALRTTLRML 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+ + +FT  Y TLAAKSRR   VLVP+LDI+QS+P+LG+++FTV +F+ L+P +V G
Sbjct: 83  AAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFFIALFPTRVAG 142

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           AE AAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+GWQ+FW L VPFSMPGL+
Sbjct: 143 AECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLI 202

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           WNMMMSMSGGWFFVVASE I VG+  I LPG+G+Y+A AI E++L AI + +LTM  VI 
Sbjct: 203 WNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVIL 262

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
            YDQLLFRP++ W++KFR+E T       SW+L L R+T  +  +   +   F+ ++   
Sbjct: 263 AYDQLLFRPLVAWADKFRMENTASASAPQSWLLDLVRRTRLIHQLLVPAGWLFARMAR-- 320

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                 L +     P     +  +++ S + D+ W  +V    + + W+ IGY+    T+
Sbjct: 321 ------LPLRWRKLPLVGPAVGPHRKPSRLGDLAWGGLVLAGTVYLLWRVIGYVSTGVTW 374

Query: 374 QDVLYVIWLGCITMFRVVVL 393
            +V +V+ +GCIT+ RV+VL
Sbjct: 375 DEVWHVLAMGCITLARVLVL 394



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 10/266 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381
           P+      + + +    D   F ++ G+    A         I  +       D +Y+  
Sbjct: 13  PKRDAAASAWRLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPE 72

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLV 437
               T  R++  ++ A +  +  G            + P   +L + P   +        
Sbjct: 73  YALRTTLRMLAAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFF 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++                +     W + F+        P D  EV+  FH+TGW+ +  +
Sbjct: 133 IALFPTRVAGAECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKL 192

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  +   + +  G W   + SE  + G+  +   G+GAY+A++  + + P +  
Sbjct: 193 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGW 252

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +L M   +LA ++ L+ PL  +  +
Sbjct: 253 VILTMTLVILAYDQLLFRPLVAWADK 278


>gi|328676224|gb|AEB27094.1| ABC transporter, permease protein [Francisella cf. novicida Fx1]
          Length = 445

 Score =  356 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 162/455 (35%), Positives = 247/455 (54%), Gaps = 12/455 (2%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G E AAIF IFTSQ WNM   +YQ++  +P +L E + +F+L+ WQ+FW + +P+S+PG
Sbjct: 1   MGLEAAAIFGIFTSQAWNMALILYQTIRIVPTELTEAATAFKLNAWQRFWKIELPYSVPG 60

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+WN+M+S S  WF + ASE I      + LPGIGSYIALA+ + +++AI YA+  ++  
Sbjct: 61  LLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALAAIIIN 120

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I          L N
Sbjct: 121 IVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLIN 180

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
               L +    I    P   +++      +      W+ V+    +        +    F
Sbjct: 181 GASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF----F 228

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              D+ Y+I L   T  RV + ++I+  I  P+GIWIG     +  IQP  Q+ AA P  
Sbjct: 229 PDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQP 288

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           +FFP+V   +     + N+W   L++ GT WY+LFNVIAG S  P +  E+  SFH+ GW
Sbjct: 289 IFFPIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKGW 348

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +WW    +P +FPY V G I+A GGAWN++I +E+  WG   ++  G+GA ++ +T    
Sbjct: 349 KWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQ 408

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             E  L V+ +C  V     F+W PLY       +
Sbjct: 409 LHEAALAVIALCSLVALCVIFIWKPLYKLAETKYK 443



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 4/212 (1%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+  L      TT+R+  AM+IS+            S +    + PI+ I  +IP   F 
Sbjct: 232 DMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIFF 291

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               V  +           +  I  I T   W + F++     N+P ++ E+++SF L G
Sbjct: 292 PIVAVLILAGDGS----LNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKG 347

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+ ++   +P   P +V  ++ +  G W   +A+E+++ G   I + GIG+ ++      
Sbjct: 348 WKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 407

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            L     A++ +  ++ L    +++P+   + 
Sbjct: 408 QLHEAALAVIALCSLVALCVIFIWKPLYKLAE 439


>gi|157827293|ref|YP_001496357.1| ABC-type anion transport system permease component [Rickettsia
           bellii OSU 85-389]
 gi|157802597|gb|ABV79320.1| ABC-type anion transport system permease component [Rickettsia
           bellii OSU 85-389]
          Length = 422

 Score =  342 bits (878), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 199/443 (44%), Positives = 273/443 (61%), Gaps = 24/443 (5%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           + N+ FS YQSL  IP DL E S  F+LS  +KF  L +PF+  GL+WN MMSMSGGWFF
Sbjct: 1   MPNIAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFF 60

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +VASE +V+G   I +PGIGSYIA AI E+D+++I+Y+++TM  VI LYDQ++FRP+IVW
Sbjct: 61  LVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVW 120

Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFH 326
           ++KFR E         S V+ LF+KTNF+             ++  +  L   L +I   
Sbjct: 121 ADKFRYENIVKACAPKSMVVDLFKKTNFITIY----------IAKIISNLLSKLYIIFIK 170

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
              N            ++ I W+  +  +AI  A +   ++    +  + L VI LG  T
Sbjct: 171 PIPNL-----------LIAIIWYGCLACLAIYAANKCYDFVKTTISLSEFLLVIKLGFFT 219

Query: 387 MFRVVVLIIIASIIWIPVG--IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           + RV+ ++I+A IIW       WI      + K+ P  Q+ +AFPAN  FP VV  +S+Y
Sbjct: 220 LLRVITMVILALIIWGAYRCIYWI-KNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHY 278

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ IILPGIFP
Sbjct: 279 NLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIILPGIFP 338

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + VTG ITA GGAWNASIV+E+ SWG++ +  TGLG YI  +     +  V +GV++M  
Sbjct: 339 HIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIGVVVMSL 398

Query: 565 FVLALNRFLWHPLYLYGTRCLRL 587
           +V+ ++R +W PLY       +L
Sbjct: 399 YVIVISRLVWRPLYNLSVSKSKL 421



 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 90/199 (45%), Gaps = 5/199 (2%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA-AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             T LR+++ ++++L+    Y  +   K+      ++P++ I  + P      F V++  
Sbjct: 217 FFTLLRVITMVILALIIWGAYRCIYWIKNSSYTEKMMPVIQIASAFPANFLFPFVVIFIS 276

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +      +   +A  F +     W + F++       P DL+E +  FR+ GW  +  + 
Sbjct: 277 HYN----LNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNII 332

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P   P +V  ++ +  G W   + +E++  G+  I   G+G YI  A    D   +   
Sbjct: 333 LPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIG 392

Query: 245 MLTMLGVIFLYDQLLFRPM 263
           ++ M   + +  +L++RP+
Sbjct: 393 VVVMSLYVIVISRLVWRPL 411


>gi|124516267|gb|EAY57775.1| putative binding-protein-dependent transport systems inner membrane
           component [Leptospirillum rubarum]
          Length = 577

 Score =  333 bits (854), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 158/535 (29%), Positives = 279/535 (52%), Gaps = 3/535 (0%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D+ SLP   +R+ LR+ +A  ISL+F +VY  L A +R    +L+P+LDI+QSIP+LG
Sbjct: 42  GTDLASLPGDLARSVLRLFAAYFISLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLG 101

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F    +   ++L+   + G ELA++  I TS  WNM F++++S+   P + +E+    + 
Sbjct: 102 FFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQA 161

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            GW +  Y  VP ++P +V+N ++S + GW+F++A EMI +G     L G+GS++ ++  
Sbjct: 162 PGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYRLRGLGSFLVVSTS 221

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP-ADSWVLYLFRKTN 293
              +L  L  ++ ++  + L D  LFRP++VWS +F ++++  +     S       +++
Sbjct: 222 SGKILDALAGIVLLVVTVVLMDFFLFRPVVVWSQRFSIDQSASLAGETRSVFREWLMESD 281

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            L        +  +     +  L R         P+   +    + VS +L +    ++ 
Sbjct: 282 VLALPRRLLSSSLTAGRAGLYALLRRFPKTFPAGPDGHGRGIF-RWVSPVLGMASLFLLS 340

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +           + +   +  +  +      +M R++   +++    +PV  ++   P 
Sbjct: 341 ILGYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYLLSLCWTVPVAWYVFVHPR 400

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P AQ++A+ PA   FP ++  V     + NL   LL++ G QWY+LFN++AGA 
Sbjct: 401 LMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLLLSGMQWYLLFNLLAGAG 460

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
            FPN+ +E A +  + G  + R I LP +FP  VTG+ITA GG WNA IVSE   +   +
Sbjct: 461 TFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKN 520

Query: 534 LRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               G+GA++ + T   G+   +V+ +L++   V+ LNRF W PLY   T    L
Sbjct: 521 YSVRGIGAFLDKVTYGSGNEILIVVSLLMLTVVVVTLNRFFWTPLYERVTSRYGL 575


>gi|206603108|gb|EDZ39588.1| Putative transmembrane transporter [Leptospirillum sp. Group II
           '5-way CG']
          Length = 577

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 159/535 (29%), Positives = 278/535 (51%), Gaps = 3/535 (0%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D+ SLP   +R+ LR+ +A  +SL+F +VY  L A +R    +L+P+LDI+QSIP+LG
Sbjct: 42  GTDLASLPGDLARSVLRLFAAYFLSLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLG 101

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F    +   ++L+   + G ELA++  I TS  WNM F++++S+   P + +E+    + 
Sbjct: 102 FFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQA 161

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            GW +  Y  VP ++P +V+N ++S + GW+F++A EMI +G     L G+GS++ ++  
Sbjct: 162 PGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQLRGLGSFLVVSTS 221

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP-ADSWVLYLFRKTN 293
              +L  L  ++ ++  + L D  LFRP++VWS +F ++++        S       ++N
Sbjct: 222 SGKILDALAGIVLLVVTVVLMDFFLFRPIVVWSQRFSIDQSASPAGETRSIFREWLMESN 281

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            L        +       ++    R L +     P+   +    + VS +L +    ++ 
Sbjct: 282 ALALSRRVLSSLLEAAMASLYAFLRRLPIAFPPGPDGNGR-GVFRWVSPVLGVSSLFLLG 340

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +A          + +   +  +  +      +M R++    ++    +PV  ++   P 
Sbjct: 341 ILAYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYFLSLCWTVPVAWYVFVHPR 400

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P AQ++A+ PA   FP ++  V     + NL   LL++ G QWY+LFN++AGA 
Sbjct: 401 LMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLLLSGMQWYLLFNLLAGAG 460

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
            FPN+ +E A +  + G  + R I LP +FP  VTG+ITA GG WNA IVSE   +   +
Sbjct: 461 TFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKN 520

Query: 534 LRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               G+GA++   T   G+   +V+ +L++   V+ LNRF W PLY   T    L
Sbjct: 521 YSVRGIGAFLDRVTYGSGNEILIVVSLLMLTVVVVTLNRFFWTPLYERVTTRYGL 575


>gi|91205578|ref|YP_537933.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
 gi|91069122|gb|ABE04844.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
          Length = 389

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 174/391 (44%), Positives = 246/391 (62%), Gaps = 3/391 (0%)

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           MMSMSGGWFF+VASE +V+G   I +PGIGSYIA AI E+D+++I+Y+++TM  VI LYD
Sbjct: 1   MMSMSGGWFFLVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYD 60

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
           Q++FRP+IVW++KFR E         S V+ LF+KTNF+        +      N     
Sbjct: 61  QIIFRPLIVWADKFRYENIVKACAPKSMVVDLFKKTNFITIYIAKIISIIFIPCNFF--- 117

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              +  I  +       +      + ++ I W+  +  +AI  A +   ++    +  + 
Sbjct: 118 INNITKIISNLLSKLYIIFIKPIPNLLIAIIWYGCLACLAIYAANKCYDFVKTTISLSEF 177

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L VI LG  T+ RV+ ++I+A IIW+P+G++IG     + K+ P  Q+ +AFPAN  FP 
Sbjct: 178 LLVIKLGFFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPF 237

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV  +S+Y+LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ 
Sbjct: 238 VVIFISHYNLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKN 297

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILPGIFP+ VTG ITA GGAWNASIV+E+ SWG++ +  TGLG YI  +     +  V 
Sbjct: 298 IILPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVA 357

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +GV++M  +V+ ++R +W PLY       +L
Sbjct: 358 IGVVVMSLYVIVISRLVWRPLYNLSVSKSKL 388



 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T LR+++ ++++L+           +      ++P++ I  + P      F V++  +
Sbjct: 185 FFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPFVVIFISH 244

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 +   +A  F +     W + F++       P DL+E +  FR+ GW  +  + +
Sbjct: 245 YN----LNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIIL 300

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P +V  ++ +  G W   + +E++  G+  I   G+G YI  A    D   +   +
Sbjct: 301 PGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVAIGV 360

Query: 246 LTMLGVIFLYDQLLFRPM 263
           + M   + +  +L++RP+
Sbjct: 361 VVMSLYVIVISRLVWRPL 378


>gi|170290357|ref|YP_001737173.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174437|gb|ACB07490.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 541

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 170/538 (31%), Positives = 282/538 (52%), Gaps = 23/538 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    LP YA  + LRM+ A + SL+F+     LAAK+ +   +++P+LD++QS+PIL F
Sbjct: 13  LSYFLLPVYALLSLLRMIIAYLFSLIFSLSIGILAAKNEKAEHIIIPLLDVLQSVPILSF 72

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +++F+NL+ G  IGAE+++IF IFTSQVWNMTF +Y+++  IPRDLEE+ R +R+ 
Sbjct: 73  LPIAIIFFINLF-GPYIGAEISSIFLIFTSQVWNMTFGVYEAVKLIPRDLEEMVRVYRIG 131

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P +M  L++N  MS  GGWFF+ ASE+I +G+  IPLPGIGS +AL++ E
Sbjct: 132 KFLYLRKILLPATMTKLIYNSAMSWGGGWFFLYASEIISLGNAQIPLPGIGSLLALSLAE 191

Query: 236 QDL---LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
                 +AIL  ++TM  V F Y   ++RP++ WS  F+ E + G             + 
Sbjct: 192 SPPRIDIAILSVLITMFLVSFTY-LFIWRPLMEWSENFKYEYSAGEIKRKRVF-----EI 245

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             +R   +   +FF  L   ++   R        F E    +           +     +
Sbjct: 246 PRVRIPPFLYRSFFRSLRYILRLPIRNYVAGFVSFVERRAGIIKKGT-----FLLLILFI 300

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+ IA      + +     +   ++     ++ RV+ +++I+    IPV + +G   
Sbjct: 301 AYSAMKIAPHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVSLLVGRGR 360

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVV--SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           H    +    ++ A+FP  V +P +V    +        +   +L +FG Q+Y+LFN +A
Sbjct: 361 HWDEFML-LFEIAASFPIPVLWPFLVKYIVLPLGDEGFEIAAIMLALFGAQFYVLFNSLA 419

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  +  +D +E+   F I G  + R +++PG+FP  VTG ITA GGAWN+ IV+E    G
Sbjct: 420 GVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSLIVAEYIKVG 479

Query: 531 HIHLRT----TGLGAYIA-ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +    +     GLG  ++  + ++G    V+    ++   V+ +NR  W  LY Y  +
Sbjct: 480 NEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRFLYDYSAK 537



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 11/251 (4%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           ++ IL        +   I   +P +    +   +   +  +  R+L+ ++ISL +T   +
Sbjct: 294 LLLILFIAYSAMKIAPHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVS 353

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  + R     ++ + +I  S PI     F V Y +   P    G E+AAI        
Sbjct: 354 LLVGRGRHWDEFML-LFEIAASFPIPVLWPFLVKYIV--LPLGDEGFEIAAIMLALFGAQ 410

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           + + F+    + +I  DLEE+ + F + G      L +P   P +V  ++ +  G W  +
Sbjct: 411 FYVLFNSLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSL 470

Query: 208 VASEMIVVGDTVI----PLPGIGSYIALA-IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           + +E I VG+ V        G+G+ +++A     D+ ++++    +  ++   ++  +R 
Sbjct: 471 IVAEYIKVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRF 530

Query: 263 MIVWSNKFRLE 273
           +  +S KFR+E
Sbjct: 531 LYDYSAKFRVE 541


>gi|170703959|ref|ZP_02894622.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170131130|gb|EDS99794.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 334

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 166/340 (48%), Positives = 224/340 (65%), Gaps = 7/340 (2%)

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M  VI  YDQ LFRP+I W++KFR+E T       SW+L L R+T  +  +   +  FF+
Sbjct: 1   MTVVILAYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFA 60

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
             +    +L  + G +RF  P+        ++ S  +DI W   V      I W+ + ++
Sbjct: 61  KAARIPLRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFV 113

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               T  DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAA
Sbjct: 114 ATGVTMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAA 173

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+ V  ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F 
Sbjct: 174 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 233

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLGAYIA++T
Sbjct: 234 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTT 293

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G FP+++LG+ +M  FV   NR LW PLY +    LRL
Sbjct: 294 AAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 333



 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 4/212 (1%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           DV  +      T LR++  + I+ +       L     RL   L P+   + + P     
Sbjct: 121 DVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPANLLF 180

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F+ +     +  ++     I     W + F++     + P D  E + +FR+ G
Sbjct: 181 PV----FVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRG 236

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ +    +P   P  V   + +  G W   + SE +  G T I   G+G+YIA      
Sbjct: 237 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAG 296

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           D   I+  +  M   + L+++LL+RP+  ++ 
Sbjct: 297 DFPKIILGIAVMSLFVTLFNRLLWRPLYAFAE 328


>gi|170703452|ref|ZP_02894222.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170131637|gb|EDT00195.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 333

 Score =  312 bits (800), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 157/340 (46%), Positives = 214/340 (62%), Gaps = 8/340 (2%)

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           M  VI  YDQ LFRP++ W++KFR+E T       SW+L + R+T+ +            
Sbjct: 1   MSVVILAYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLV 53

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P    + +  R              +  S +  S + DI W   V  V + +AW+ + ++
Sbjct: 54  PAGWLLSQAARIPLRAPSRNDARA-RAASVRGSSRIGDIAWGTFVILVTVYVAWRVVSFV 112

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               T  +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAA
Sbjct: 113 ATGVTTGEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAA 172

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FPAN+ FP+ V  + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE   +F 
Sbjct: 173 FPANLLFPVFVIAIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFR 232

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIVSE   WG   +   GLG+YIA++T
Sbjct: 233 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTT 292

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             G FP+++LG+ +M  FV   NR LW P+Y Y    LRL
Sbjct: 293 AAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 332



 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 4/201 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T LR+L  + I+ +       L      L   + P+   + + P        V+  ++ +
Sbjct: 131 TLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLLFPVFVIAIVHFH 190

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + A++     I     W + F++     + P D +E +++FR+ GWQ +    +P 
Sbjct: 191 ----LNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPG 246

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P  V   + +  G W   + SE +  GDT +   G+GSYIA      D   I+  +  
Sbjct: 247 IFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAV 306

Query: 248 MLGVIFLYDQLLFRPMIVWSN 268
           M   + L+++LL+RPM  ++ 
Sbjct: 307 MSLFVTLFNRLLWRPMYAYAE 327


>gi|251772337|gb|EES52905.1| probable binding-protein-dependent transport systems inner membrane
           component [Leptospirillum ferrodiazotrophum]
          Length = 571

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 169/574 (29%), Positives = 282/574 (49%), Gaps = 15/574 (2%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    ++  L  +++   + +L      + VP    +      D+  LP     + +R+ 
Sbjct: 7   RRLSFLWPTLLGLVIFSGVVLLFSRSAPSGVPVIPRE------DLRDLPGDILHSLVRLF 60

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A ++SL F + Y   AA +R    +L+P+LDI+QSIP+LGF    V+  + L+P   +G
Sbjct: 61  LAYLLSLSFAYAYGLAAALTRLGPRLLIPVLDILQSIPVLGFFPAVVLVMVPLFPTTHMG 120

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A+I  I TS  WNM F++Y+S+   P +L ++ R  R   W       VP ++P +V
Sbjct: 121 VEAASIVLIATSMAWNMAFAVYESVRTAPPELTDLFRGIRAPAWLWALRFLVPVTLPKVV 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           +N ++S + GW+F++A EMI +G     LPG+GS++  + ++      L  +  ++  + 
Sbjct: 181 YNSVLSWTAGWYFLIACEMIALGPVHYELPGLGSFLVGSTEKGHFGEALLGIGALVVTVM 240

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPA-DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
           + D L+FRP + WS+ FRL       P   S V  L   +++L     S  +  +     
Sbjct: 241 ILDLLVFRPFLAWSHNFRLGEVESHTPRISSPVYDLLAGSSWLGQFRSSVSDMAAGFFRR 300

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           + ++ R     R       L L         L          V  G   Q I        
Sbjct: 301 ISRVPRRRQTFRDSSALRLLGLLLLGFFGGYLFTESLYAGVRVVTGWINQGI-------P 353

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           ++ +  +      +  R+VV  +++ +  +PV  W+   P +S  + P A+++A+ PA  
Sbjct: 354 WRSLAELPADLLYSSLRLVVAYLLSLLWTLPVAYWVFRTPRLSRIVFPLAEIMASVPATA 413

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP V+  V  +  + NL   LL++ G QWY+LFN+++G   FP + +EV+ +F I    
Sbjct: 414 LFPFVIVLVVTHLHSMNLASILLLMSGMQWYLLFNLLSGVGTFPAELREVSLTFGIRQGL 473

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           + R + LP + P  VTG+ITA GG WNA IVSE   +        GLGA++  +T +G+ 
Sbjct: 474 FIRKVFLPFLLPSLVTGSITAFGGGWNALIVSEYVVYAKKDYGVDGLGAFLDRATYQGAH 533

Query: 553 P-EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           P  +V  +L+M   V+A NRF W PLY   T+  
Sbjct: 534 PVLIVAALLVMTAAVVAANRFFWIPLYERVTQRY 567


>gi|308180844|ref|YP_003924972.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308046335|gb|ADN98878.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 454

 Score =  303 bits (776), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 142/466 (30%), Positives = 241/466 (51%), Gaps = 18/466 (3%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           M L+P  V+G E  AIF +FT+Q WN+  ++YQSL   P DL  V++ F  + WQ+FW L
Sbjct: 1   MGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRL 60

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
              ++ P ++WN+++S S  WF +VA E   ++V  +  + LPGIGSYI +A+   +  A
Sbjct: 61  EFLYATPSILWNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGA 120

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIG 299
           ++ A++ ++  + L +  +F+P+I  +  ++    T    P  S V  L         + 
Sbjct: 121 VINAVIALVICVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVK 180

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
               +          K  + LG  R              R+     ++W      V    
Sbjct: 181 RLHRHIRYWWLYGAPKQWQKLGFSRII------------RILKKYTVYWRIAWWLVIAVG 228

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            ++    ++ +  + ++  +     +T  RV++ ++++++I+IP+ +W+         IQ
Sbjct: 229 LYRLGVLLIKYLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQ 288

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L + PA+++ P+V   ++      + W+  L++ GTQWY  FN+IAG  A P+D 
Sbjct: 289 PVGQVLGSIPADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDI 348

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           K+V + FH++GWRWW + ++P +FP ++T  I A G AWNA I +E+ SWG      TGL
Sbjct: 349 KDVVNIFHLSGWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGL 408

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           GAYIA+     + P    GVLI+C  V      +W PLY +  R  
Sbjct: 409 GAYIAQ--NINNKPAEATGVLIICVIVGLCVVLIWQPLYRFAERRF 452



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 6/214 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +++  L ++   TT R+L A+++S L     A   A + R   ++ P+  ++ SIP   +
Sbjct: 243 INLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIPADIY 302

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    +        +        I  I T   W   F++      IP D+++V   F LS
Sbjct: 303 IPIVALMITLTGTTQ----HWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLS 358

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           GW+ + +  +P   P  +  ++ +    W   +A+E+I  G     + G+G+YIA  I  
Sbjct: 359 GWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQNINN 418

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +   A    +L +  ++ L   L+++P+  ++ +
Sbjct: 419 K--PAEATGVLIICVIVGLCVVLIWQPLYRFAER 450


>gi|206895688|ref|YP_002246654.1| ABC transporter, permease protein [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738305|gb|ACI17383.1| ABC transporter, permease protein [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 499

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 153/530 (28%), Positives = 263/530 (49%), Gaps = 36/530 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A  +T R+  A  +SL F   Y   A+   R   +++ ILDI+QS+PILGF    
Sbjct: 2   QLISAALWSTYRIFVAYFLSLAFGIFYGVSASSGPRREKIMIAILDILQSVPILGFFPVA 61

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F+ ++ G+ IG ELAAIF IFTSQ WN+ F +Y+++  +PR+L EV ++F  S    
Sbjct: 62  IAFFVAVFRGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRELVEVGKAFNFSKTFT 121

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P  +P +V+N  +SM+ GW+F++ASE+I +G   + LPG+GS +   + + ++L
Sbjct: 122 IQRIYLPAMVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPGLGSSMMNYLAQGNIL 181

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKTNFLRF 297
            ++  + T++ +  L   L+FRP++ WS  F+     T   +P  + VL+ F K   +  
Sbjct: 182 GVVMCIGTIVLINALLQVLIFRPLVKWSELFQYNAVGTAPEWPTVADVLFDFGKALKVDT 241

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +                                 +++S +    ++ +   +  
Sbjct: 242 VLVKLVSL------------------------------GTKKLSAVAKYVFYVIGAALVG 271

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+ +         +    +  +     +T  RVV  ++IA ++ +P  I        +  
Sbjct: 272 GLGYLIFWLFSPPYPSNILSQIPAALTVTTMRVVAAVVIAVLLALPFVIRSVKNVAAAQN 331

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I   A +L + PA VF+P +V+     ++ P     LL++ G+ WY LFN+  GA   P 
Sbjct: 332 IYSLASILGSIPAVVFYPPIVALGGRAYMEP--LSILLLLTGSFWYALFNMSKGAMLLPG 389

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E+A  F+I GW +++ I++P I P  +TGA+TA GGAWNASIV+E   +G       
Sbjct: 390 VLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKVYSIP 449

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G+GA + +ST       ++L VL M   ++ +N   W P Y        +
Sbjct: 450 GIGALLVQSTA--DTKALLLIVLSMTALIVLVNMLFWRPWYSKAAEKYNI 497



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 17/238 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
             ++G +  L+  +     P +I+  +P  L V         TT+R+++A+VI++L    
Sbjct: 267 AALVGGLGYLIFWLFSPPYPSNILSQIPAALTV---------TTMRVVAAVVIAVLLALP 317

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   + K+      +  +  I+ SIP + F    V        G     E  +I  + T 
Sbjct: 318 FVIRSVKNVAAAQNIYSLASILGSIPAVVFYPPIVAL------GGRAYMEPLSILLLLTG 371

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             W   F+M +    +P  L E+++ F + GW  +  + +P  +P L+   + +  G W 
Sbjct: 372 SFWYALFNMSKGAMLLPGVLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWN 431

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             + +E +  GD V  +PGIG+ +  +    D  A+L  +L+M  +I L + L +RP 
Sbjct: 432 ASIVAEHVQFGDKVYSIPGIGALLVQSTA--DTKALLLIVLSMTALIVLVNMLFWRPW 487


>gi|284173141|ref|ZP_06387110.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus solfataricus 98/2]
 gi|261600964|gb|ACX90567.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus solfataricus 98/2]
          Length = 536

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 117/533 (21%), Positives = 225/533 (42%), Gaps = 28/533 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A K++    + + +L++ +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKNKAFENIYISVLEVFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYLGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +  +F++  SE+  +G +   + GIG+ IA     Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAFFYITVSEVFSIGSSSYHVFGIGTIIAAFTASQEYNLALEG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +  +I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGVLAILITIFTYLLRR---------FANYTVSKYGLDTEIKVAKRGRMRIRYTTRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I     + G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRTTISEEETRRNLPW-----RYLGIGISVFLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +          +   V++   I   RV+ + I++ +  I +G +I     +   + P 
Sbjct: 295 SSVPKSVLLYLISNTPNVLFNLLIDYVRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPI 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL++          +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQAYASFPAPAYFPLLLMATISFIHSVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532
           PN + E+  +++ + W+  RY+I+P  FPY + G  +    AW    + E       G+ 
Sbjct: 415 PNQYWEIMKNYNFSFWQKLRYVIVPSTFPYIIAGLSSTINSAWGGLAIGEYWTNIVNGYT 474

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 LQVSHGIMKNIAVATANGNVPLAAWDSLIFGIVVIIYSIFFTRKMMDLAREKY 527



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +++ ++     ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EIVIILLASLASLGRVFLTIGLSIITGWFLGYIAIKNKAFENIYISVLEVFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    +L   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYLGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A+    VSEV S G       G+G  IA  T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAFFYITVSEVFSIGSSSYHVFGIGTIIAAFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ ++   +      L  
Sbjct: 183 YNLALEGLGVLAILITIFTYLLRR 206


>gi|325967864|ref|YP_004244056.1| binding-protein-dependent transporters inner membrane component
           [Vulcanisaeta moutnovskia 768-28]
 gi|323707067|gb|ADY00554.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta moutnovskia 768-28]
          Length = 557

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 116/539 (21%), Positives = 232/539 (43%), Gaps = 20/539 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+   +++S++  + +   AAK+     + + I   ++++P++ F    +++F+
Sbjct: 17  TLATFGRVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVITFFPIVLIFFV 76

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+    Y+++   P+ LE+ +    L  W KF YL 
Sbjct: 77  KS-IGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLGFWGKFRYLY 135

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP +  N+++S +   F++V SE++ +G T   + GIG+ IA      +  A    
Sbjct: 136 IPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSRSEWTAAFTG 195

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD-------SWVLYL-FRKTNFLR 296
           +  ++ ++      + RP + W+ K+  +    +           S V  L  R   +LR
Sbjct: 196 LGVLVVMVTSVLFGILRPFVDWAVKYSYDPFMEVTRTRVRRPIVTSRVRSLAARNMRYLR 255

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +                   R   + R   P     +  ++R   +  + +   +   +
Sbjct: 256 RVVAVEDAIMPIFVKASSYAVRHRLLSR---PRPRNIITESERYIGIGIVIFVIGLITYS 312

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           I  +W++    + +  Y+  L  ++   +  FRV+++ + A +  IPV   +     + S
Sbjct: 313 IYESWKTTWVPIINNLYEYGLLYLYYLGLDWFRVILVTVAAILTAIPVNYLMVTHRRVES 372

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVI 469
            + P  + LA+ P + + PL+      Y       H++  + + ++    T WY+++N+ 
Sbjct: 373 ILLPVLEDLASIPVSAYLPLIAIPFITYLAVSLGSHISLEILVFVVAYLSTAWYVIYNMY 432

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P    +VA +  ++ W+  R + +PG  P  +TG  +  G  W    V+E    
Sbjct: 433 VGMKTIPRSLWDVAENLRLSTWQKLRRLAIPGAMPATITGLASTAGSTWGGLEVAEYIQG 492

Query: 530 -GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                    G  A +   T  G+   +    LI+   V+ L+ FLW  L+       RL
Sbjct: 493 LNGQVYMVHGYTALMDYYTAIGNIVGLEAMSLILGINVVLLSVFLWRKLFRLARERYRL 551



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 5/209 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM---NL 126
            R++   V ++L       L    RR+  +L+P+L+ + SIP+  +L    + F+    +
Sbjct: 344 FRVILVTVAAILTAIPVNYLMVTHRRVESILLPVLEDLASIPVSAYLPLIAIPFITYLAV 403

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G  I  E+      + S  W + ++MY  +  IPR L +V+ + RLS WQK   L +P
Sbjct: 404 SLGSHISLEILVFVVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLSTWQKLRRLAIP 463

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            +MP  +  +  +    W  +  +E I  +   V  + G  + +       +++ +    
Sbjct: 464 GAMPATITGLASTAGSTWGGLEVAEYIQGLNGQVYMVHGYTALMDYYTAIGNIVGLEAMS 523

Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273
           L +   + L    L+R +   +  ++RLE
Sbjct: 524 LILGINVVLLSVFLWRKLFRLARERYRLE 552



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 3/212 (1%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +  VL        T  RV + II++ ++    G                 Q L A P   
Sbjct: 7   WSIVLVAFLATLATFGRVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVIT 66

Query: 433 FFPLVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           FFP+V+         ++   L +  L+     W I           P   ++ A   ++ 
Sbjct: 67  FFPIVLIFFVKSIGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLG 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W  +RY+ +P   P      + +   A    +VSEV + G       G+GA IA  T +
Sbjct: 127 FWGKFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSR 186

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
             +     G+ ++   V ++   +  P   + 
Sbjct: 187 SEWTAAFTGLGVLVVMVTSVLFGILRPFVDWA 218


>gi|332797789|ref|YP_004459289.1| ABC-type anion transport system, duplicated permease component
           [Acidianus hospitalis W1]
 gi|332695524|gb|AEE94991.1| ABC-type anion transport system, duplicated permease component
           [Acidianus hospitalis W1]
          Length = 544

 Score =  282 bits (723), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/544 (21%), Positives = 226/544 (41%), Gaps = 24/544 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D+         T  R+   +  +++  ++   ++ KS+    + + + +I +S+P++ F
Sbjct: 2   FDIWLAIYDTLLTLGRVFIDIAFAIVTGWLLGYISLKSKTFENIYISLSEIFESVPVISF 61

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +++F+    G  +G ELA +F +FT+ VWN+   +YQ+   +P ++EEV R++R  
Sbjct: 62  FPVVLIFFVFSIGGS-LGIELAVLFLVFTAVVWNIWMGIYQAFKTVPSEMEEVIRNYRFG 120

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
              K   L +PFS+P +  N++ S +   F++  SE+  +G     +PGIG+ IA    E
Sbjct: 121 FVGKMLRLYIPFSIPRIAANLIPSFADALFYITVSEVFSIGTKCYEVPGIGTLIAQYTAE 180

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNF 294
            D    +YA++ +LG+      LL R    +S  K+ L+            L  F++  F
Sbjct: 181 GDYTDAIYALI-VLGIFTTTITLLLREFAEYSVKKYGLDTEAS--------LKSFKRGRF 231

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
                    N     +   K L +     R +   +  +    +++   +      ++  
Sbjct: 232 RIRYSARLSNSKGVFAKLGKYLTKPPYFTRQNRLMDEEEEAKKRKIPINMISAGIGILLL 291

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGF 410
           + I     S+   V   T+  ++  +    I +     RV V+ +++ I  + VG +I  
Sbjct: 292 IIILYGAYSVIISVKPSTWSYLISTLPQDLIDLGADYLRVAVISLMSFIFAVFVGYYIAR 351

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYI 464
             +    I P  Q  +AFPA  +FPL+           +       ++ LL    T +Y+
Sbjct: 352 HTNADRAIVPIIQTFSAFPAPAYFPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYV 411

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            ++   G    P+++ E+  +  +  W   R IILP  FPY + G  +    AW    + 
Sbjct: 412 FYSFWIGVKNLPSEYWELMDNLKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIG 471

Query: 525 EV---ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           E              TGL   +A +  +G+   V    LI    V+  +      +    
Sbjct: 472 EYWPDIYQSQTLEVRTGLMKALAVADNQGNLALVGWLSLIFAIIVVIYSVLFTRKMMDLA 531

Query: 582 TRCL 585
            +  
Sbjct: 532 RKKY 535


>gi|315427282|dbj|BAJ48894.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 517

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 150/522 (28%), Positives = 251/522 (48%), Gaps = 24/522 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LRM +A+++S+LF+ V  T A  ++    V VP+LDI+QSIPILGF    +  F    
Sbjct: 17  SFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYAAS 76

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  V GAELAAIF IFTSQVWN+TF++Y+S   I  +L +V+ S R+S +++F ++ +P 
Sbjct: 77  P--VFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPA 134

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +V N   S + G FF+V +E++  GD  + L G+G+ ++      DLL I+  +L 
Sbjct: 135 CLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLV 194

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           ++    + + L+F P+        +  T G  P       L R+  F++ +        +
Sbjct: 195 LVAATIMVNFLVFIPLG------TMFETAGPPPPG-----LLRRFAFIKKLAKPFQTTLA 243

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
               +  +  R++  +                V  ++ +     +  +AI    +  G +
Sbjct: 244 TPVISFFEYQRSVSGLVNRVS------VLGSLVRNLIFLILIGFLATLAITRGNEFFGSL 297

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                   V  ++     +  RV+  +  +    IP  + I  RP +S+ +    Q++A+
Sbjct: 298 YQTLGRVGVDNLLSSAVFSFVRVMGAVGFSVAWSIPAAVAIARRPQLSTAVTTVFQVVAS 357

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  + +PL           P L   ++++  TQWY+ F V+AG    P    EVA    
Sbjct: 358 IPVTIVYPLF---AETLKDQPELRAFVMILAATQWYVFFQVLAGLKNIPRSELEVADMLQ 414

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT--TGLGAYIAE 545
           +  W   R + LP   P  +TG ITA GGAWN  +V+E    G +   T   GLG  +++
Sbjct: 415 LKTWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETDLPGLGKLLSQ 474

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            T  G     V  +++M   V+ +NRF W  LY      L++
Sbjct: 475 LTYAGDLLGSVSVLIVMSSIVVLMNRFFWKKLYDLVASKLKI 516



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 11/243 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F+++IG +  L   I         +      + V +L   A  + +R++ A+  S+ +
Sbjct: 273 LIFLILIGFLATLA--ITRGNEFFGSLYQTLGRVGVDNLLSSAVFSFVRVMGAVGFSVAW 330

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +   A   A+  +L   +  +  ++ SIP+            +         EL A   I
Sbjct: 331 SIPAAVAIARRPQLSTAVTTVFQVVASIPVTIVYPLFAETLKDQ-------PELRAFVMI 383

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  W + F +   L NIPR   EV+   +L  W +   + +P ++P L+   + +  G
Sbjct: 384 LAATQWYVFFQVLAGLKNIPRSELEVADMLQLKTWTRIRMVYLPRALPALITGCITAAGG 443

Query: 203 GWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  +V +E +V+GD      LPG+G  ++      DLL  +  ++ M  ++ L ++  +
Sbjct: 444 AWNGLVVAERLVLGDLVAETDLPGLGKLLSQLTYAGDLLGSVSVLIVMSSIVVLMNRFFW 503

Query: 261 RPM 263
           + +
Sbjct: 504 KKL 506



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 78/196 (39%), Gaps = 2/196 (1%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R+   +I++ +  I VG   G          P   +L + P   FFP+ +     
Sbjct: 15  LVSFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYA 74

Query: 444 YH--LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L    L+     W I F V         +  +VA+S  ++ +  +R+I LP 
Sbjct: 75  ASPVFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPA 134

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  V     +        + +E+ ++G + L+  G+G  ++E    G    ++  +L+
Sbjct: 135 CLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLV 194

Query: 562 MCCFVLALNRFLWHPL 577
           +    + +N  ++ PL
Sbjct: 195 LVAATIMVNFLVFIPL 210


>gi|307596035|ref|YP_003902352.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta distributa DSM 14429]
 gi|307551236|gb|ADN51301.1| binding-protein-dependent transport systems inner membrane
           component [Vulcanisaeta distributa DSM 14429]
          Length = 554

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 117/539 (21%), Positives = 226/539 (41%), Gaps = 20/539 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+   +V+ ++  +     AAKS     V + I   ++++P++ F    +V+F+
Sbjct: 14  TLATFGRVTLTIVLGIVLGWFLGYAAAKSGLFERVFLSITQTLEAVPVITFFPIVLVFFV 73

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+    Y+++   P+ LE+ +  F LS W +F YL 
Sbjct: 74  KS-IGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLSFWGRFRYLY 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP +  N+++S +   F++V SE+I +G T   + GIG+ IA    + + +     
Sbjct: 133 IPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSKGEWVPAFVG 192

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD-------SWVLYL-FRKTNFLR 296
           +  ++ ++      + RP + W+ K+  +    +           S V  L  R   ++R
Sbjct: 193 LGILVVMVTAVLFGVLRPFVNWAVKYSYDPFMEVTRTRIRRPIITSRVRSLAARNMRYIR 252

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +                   R   ++R   P     +   ++   +       ++    
Sbjct: 253 RVVAVEDAIMPIFIRASSYAVRHRLLVR---PRPRNIITRTEKYIGIGVATAIIILLAYL 309

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           I  +WQ     + +  Y   L  ++   +   R+ ++   + I  IP+   +     + +
Sbjct: 310 IYSSWQVTWVPIINNLYDHGLLYLYYLGLDWLRIALVTAASIITAIPINYLMVTHRRVEA 369

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVI 469
            + P  + LA+ P + + PL+    + Y       H++  L + L+    T WY+++N+ 
Sbjct: 370 ILLPILEDLASIPVSAYLPLIAIPFTTYVATTLGLHVSLELLVFLVAYLSTAWYVIYNMY 429

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P    +VA +  +  W+  R + +PG  P  +TG  +  G  W    V+E    
Sbjct: 430 VGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGAMPATITGLASTIGSTWGGLEVAEYIQG 489

Query: 530 -GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                    G  A +   T  G+   +    LI+   V+ L+ FLW  L+       RL
Sbjct: 490 LNGQVYMVHGYTALMDYYTAVGNVVGLEAMSLILAINVILLSVFLWRRLFKLARERYRL 548



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 5/208 (2%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLY 127
           R+      S++       L    RR+  +L+PIL+ + SIP+  +L    + F   +   
Sbjct: 342 RIALVTAASIITAIPINYLMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATT 401

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +  EL      + S  W + ++MY  +  IPR L +V+ + RL  WQK   L +P 
Sbjct: 402 LGLHVSLELLVFLVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPG 461

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +MP  +  +  ++   W  +  +E I  +   V  + G  + +       +++ +    L
Sbjct: 462 AMPATITGLASTIGSTWGGLEVAEYIQGLNGQVYMVHGYTALMDYYTAVGNVVGLEAMSL 521

Query: 247 TMLGVIFLYDQLLFRPMIVWS-NKFRLE 273
            +   + L    L+R +   +  ++RLE
Sbjct: 522 ILAINVILLSVFLWRRLFKLARERYRLE 549



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 3/212 (1%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +   L        T  RV + I++  ++   +G                 Q L A P   
Sbjct: 4   WSIALIAFLATLATFGRVTLTIVLGIVLGWFLGYAAAKSGLFERVFLSITQTLEAVPVIT 63

Query: 433 FFPLVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           FFP+V+         ++   L +  L+     W I           P   ++ A  F+++
Sbjct: 64  FFPIVLVFFVKSIGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLS 123

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W  +RY+ +P   P      + +   A    +VSEV + G       G+GA IA  T K
Sbjct: 124 FWGRFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSK 183

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           G +    +G+ I+   V A+   +  P   + 
Sbjct: 184 GEWVPAFVGLGILVVMVTAVLFGVLRPFVNWA 215


>gi|229583288|ref|YP_002841687.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.N.15.51]
 gi|228014004|gb|ACP49765.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.N.15.51]
          Length = 535

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSC------VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHTVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNV 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|323473746|gb|ADX84352.1| ABC-type anion transport system, duplicated permease component
           [Sulfolobus islandicus REY15A]
          Length = 535

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 118/532 (22%), Positives = 222/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+           +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFIATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   I+ +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSISVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|15899210|ref|NP_343815.1| ABC transporter, putative [Sulfolobus solfataricus P2]
 gi|227826664|ref|YP_002828443.1| binding-protein-dependent transporters inner membrane component
           [Sulfolobus islandicus M.14.25]
 gi|238618750|ref|YP_002913575.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.4]
 gi|13815769|gb|AAK42605.1| ABC transporter, putative [Sulfolobus solfataricus P2]
 gi|227458459|gb|ACP37145.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.14.25]
 gi|238379819|gb|ACR40907.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.4]
 gi|323476396|gb|ADX81634.1| ABC-type anion transport system, duplicated permease [Sulfolobus
           islandicus HVE10/4]
          Length = 535

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|229578075|ref|YP_002836473.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.G.57.14]
 gi|228008789|gb|ACP44551.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus Y.G.57.14]
          Length = 535

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSIAVATANGNVPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|229583828|ref|YP_002842329.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.27]
 gi|228018877|gb|ACP54284.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus M.16.27]
          Length = 535

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 117/529 (22%), Positives = 219/529 (41%), Gaps = 21/529 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R     R    E   +     R   +        +          S+
Sbjct: 240 TIAPFVKLSKYVTRIGS--RSASSEEETRRNLPWRYLGIGISVLLLGLLVYGALSTISSV 297

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
              V  +       V++   I   RV+ + I++ +  I +G +I  R  +   + P  Q 
Sbjct: 298 PKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQT 357

Query: 425 LAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    PN 
Sbjct: 358 YASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQ 417

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRT 536
           + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +    +
Sbjct: 418 YWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVS 477

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 478 HGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|167909682|ref|ZP_02496773.1| putative transmembrane transporter [Burkholderia pseudomallei 112]
          Length = 310

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 153/292 (52%), Positives = 202/292 (69%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRA 310



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|227829305|ref|YP_002831084.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.S.2.15]
 gi|227455752|gb|ACP34439.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.S.2.15]
          Length = 535

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFAATISFIHSVFGSWIDEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|167844450|ref|ZP_02469958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 321

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 155/303 (51%), Positives = 205/303 (67%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G          +     L 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318

Query: 318 RTL 320
             L
Sbjct: 319 VRL 321



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|27877096|dbj|BAC55866.1| hypothetical protein [Acidianus brierleyi]
          Length = 537

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/540 (20%), Positives = 213/540 (39%), Gaps = 23/540 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D+         T  R+   +  S++  ++   +A K+R    + + I ++++S+P++ F
Sbjct: 2   FDLGLAILATLATLARVFITIGASIVTGWLLGYIAIKNRIFENIYISISEVLESVPVITF 61

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +++F+    G  +G ELA +F +FT+ VWN+   +YQ+   +P +L EVS +++L 
Sbjct: 62  FPVVLIFFV-FEIGGSLGVELAVLFLVFTAVVWNIWMGIYQAFKTVPENLLEVSENYKLG 120

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
              K   L +PFS+P +  N++ S +   F++  SE+  VG     + GIG+ I+     
Sbjct: 121 FLDKMIKLYIPFSIPRIAANLIPSFADALFYISVSEVFSVGVHTYQVFGIGTLISEYTAM 180

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNF 294
            +    LY +L +L +       L R    +S  ++ L+                R+  F
Sbjct: 181 GEYTNALY-LLLVLAIFTTSITFLLREFAAFSVQRYGLDTEVKENN--------MRRGRF 231

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
                    +   P +   K + R   +                        F F  +  
Sbjct: 232 RVGYSARLSSAKGPFTKLAKYVTRPRPIDIDEEESKKKMPWGK---IGAGIGFLFLFLLA 288

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            +  I  +++     ++ +  V   +    +   RV ++ +I+ +I I  G ++      
Sbjct: 289 YSAFIVVKNVSASTWYYLFSTVPDDLIQIGMDYIRVAIIALISFVIAIFSGYFLAKDHKA 348

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNV 468
                P  Q +AAFPA  +FPL+                   ++  L    T +YI ++ 
Sbjct: 349 ERIAIPIIQSIAAFPAPAYFPLLFGATYPYLSKILGGYTDEFYVLFLGFISTFYYIFYSY 408

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-- 526
             G    P+++ EV  + ++  W+  R +++P  FPY + G  +    AW    + E   
Sbjct: 409 WLGVKNMPSEYWEVMDNLNMGFWQRLRKVVIPSAFPYIIAGLSSTVNSAWGGLAIGEYWP 468

Query: 527 -ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                +     TGL   +A +   G    V    LI    V+  + F    L     +  
Sbjct: 469 QIYNNYNLEVRTGLMKELALADANGQLALVGWLSLIFAVIVVMYSIFFTRKLLDLARKKY 528


>gi|330834718|ref|YP_004409446.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera cuprina Ar-4]
 gi|329566857|gb|AEB94962.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera cuprina Ar-4]
          Length = 536

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 123/529 (23%), Positives = 220/529 (41%), Gaps = 25/529 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+   +++S++  +  A  A K+R    + V + ++++S+P++ F    +++F    
Sbjct: 13  TISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFPVVLIFFATDI 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  IG ELA IF +FT+ VWN+   +YQ+    P +L EV+ + RL    K   L +PF
Sbjct: 73  GGS-IGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLGKLSKLYIPF 131

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P +  N++ S +   F++  SE+  VG+T   + GIGS IA           LYA L 
Sbjct: 132 SVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKYTEALYA-LA 190

Query: 248 MLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           +LGV         R    ++  ++ L+                R+  F         N  
Sbjct: 191 VLGVFVALITFALREFSSFAVQRYGLDTEVSN--------MSVRRGRFRIRYSAKISNAV 242

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           +P++   K + R+  V      +   +  SN  +V   L +F         I    +S  
Sbjct: 243 APVTKLAKYVIRSKPVSLDEEEDEKRRSWSNVGKVIAALFLFGISYSIFTVIETIPKSTW 302

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
             +   T  D    ++L      RV ++ I + +I I +G W+     I     P  Q  
Sbjct: 303 VSLVSSTPFD----LYLIVTDYARVALISITSLVIAIFLGYWLSLHHRIDRVAIPVIQTF 358

Query: 426 AAFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           AAFPA  +FPLV      +            ++ LL    T +Y+ ++   G    P+++
Sbjct: 359 AAFPAPAYFPLVYGATYTMLYKILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEY 418

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHLRT 536
            EV ++ +++ W+  + ++ P  FPY +TG  +    AW    + E       G      
Sbjct: 419 WEVMNNLNLSFWQKLKKVVFPSSFPYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVH 478

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            GL   +A +  +G+   +    ++    V+  +      L        
Sbjct: 479 EGLMKELALADSQGNLALIGWLSILFAIVVVIYSILFTRKLLDLSREKY 527



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 4/215 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++       +T+ RV + +I++ +    +  +              +++L + P   FFP
Sbjct: 3   LILAFLAVIVTISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFP 62

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+   +      +   L +  L+     W I   +       P + +EVA +  +    
Sbjct: 63  VVLIFFATDIGGSIGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLG 122

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P      I +   A     VSEV S G+ +    G+G+ IA  T    +
Sbjct: 123 KLSKLYIPFSVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKY 182

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            E +  + ++  FV  +  F       +  +   L
Sbjct: 183 TEALYALAVLGVFVALIT-FALREFSSFAVQRYGL 216



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 103/258 (39%), Gaps = 9/258 (3%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR + N+  ++A + + GI   +   I+       +  +     D++ +    +R  L 
Sbjct: 267 KRRSWSNVGKVIAALFLFGISYSIFTVIETIPKSTWVSLVSSTPFDLYLIVTDYARVALI 326

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNLYPG 129
            ++++VI+           +   R+  V +P++    + P   +        Y M     
Sbjct: 327 SITSLVIA----IFLGYWLSLHHRIDRVAIPVIQTFAAFPAPAYFPLVYGATYTMLYKIL 382

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E   +   F S  + + +S +  + N+P +  EV  +  LS WQK   +  P S 
Sbjct: 383 GPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEYWEVMNNLNLSFWQKLKKVVFPSSF 442

Query: 190 PGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           P ++  +  +++  W  +   E    I  G T+    G+   +ALA  + +L  I +  +
Sbjct: 443 PYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVHEGLMKELALADSQGNLALIGWLSI 502

Query: 247 TMLGVIFLYDQLLFRPMI 264
               V+ +Y  L  R ++
Sbjct: 503 LFAIVVVIYSILFTRKLL 520


>gi|284996663|ref|YP_003418430.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.D.8.5]
 gi|284444558|gb|ADB86060.1| binding-protein-dependent transport systems inner membrane
           component [Sulfolobus islandicus L.D.8.5]
          Length = 535

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  +  R+   + +S++  +    +A KS+    + + +++I +S+P++ F    +++F+
Sbjct: 11  SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  IG ELA  F +FT+ VWN+   +YQ+   +P DL EVS ++RL    K   L 
Sbjct: 71  YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+S P +  N++ S +   F++  SE+  +G +   + GIG+ I      Q+    L  
Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +   I ++  LL R             T   Y  D+ +    R    +R+    S N
Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +P     K + R          E    L         L I    ++ G+ +  A+ +I
Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +              V++   I   RV+ + I++ +  I +G +I  R  +   + P 
Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354

Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q  A+FPA  +FPL+ +         +       ++ LL    T +Y+ ++   G    
Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWIEEFYVILLGFISTFYYVFYSYWLGIKNM 414

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533
           PN + E+  +++ + W   RY+I+P  FPY ++G  +    AW    + E    S  +  
Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + G+   IA +T  G+ P      LI    V+  + F    +        
Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      ++ RV + I ++ I    +G          +      ++  + P   FF
Sbjct: 3   EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+    Y    ++   L +  L+     W I   +       P+D  EV+ ++ +   
Sbjct: 63  PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P  +P      I +   A     VSEV S G       G+G  I E T    
Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           +   + G+ I+   ++     L  
Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206


>gi|167917694|ref|ZP_02504785.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 317

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 153/286 (53%), Positives = 202/286 (70%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           LLFRPM+ W++KFR ++T       SW+L L  + +  + +G    
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLG 304



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|167718237|ref|ZP_02401473.1| putative transmembrane transporter [Burkholderia pseudomallei DM98]
          Length = 298

 Score =  274 bits (702), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 200/280 (71%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           LLFRPM+ W++KFR ++T       SW+L L  + +  + 
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQR 298



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|146304142|ref|YP_001191458.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera sedula DSM 5348]
 gi|145702392|gb|ABP95534.1| binding-protein-dependent transport systems inner membrane
           component [Metallosphaera sedula DSM 5348]
          Length = 538

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 116/528 (21%), Positives = 228/528 (43%), Gaps = 22/528 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+   +++S++  ++   LA K+R    V + + ++++S+P++ F    +++F++  
Sbjct: 14  TVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFPVVLIFFVSD- 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +G +LA IF +FT+ VWN+   +YQ+   +P +L EV+ + RL    K   L +PF
Sbjct: 73  IGGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLGKMSKLYIPF 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P +  N++ S +   F++  SE+  VG++   + GIGS I+           LYA L 
Sbjct: 133 SIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLYNQALYA-LG 191

Query: 248 MLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           +L V+ ++     R    +S  ++ L+  +             R+  F         N  
Sbjct: 192 ILAVVVVFITFGLREFASFSVQRYGLDTESSNKA--------LRRGRFRIRYSAKVSNAI 243

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+S   + + R+   +     E   ++    ++  ++    F +    ++    +S+  
Sbjct: 244 APVSKLARYVTRS-KTVPVDVDEEEEKVRQWGKIG-IVIAALFLLGISYSVFTVIRSVSP 301

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               F      Y + L  I   RV V+ +++ +I I VG W+         + P  Q +A
Sbjct: 302 QTWSFLISSTPYDLVLIGIDYMRVGVISVVSLLIAIFVGYWLSVHERTERVVIPMIQTVA 361

Query: 427 AFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +FPA  +FPL+      +            ++ LL    T +Y+ ++   G    P ++ 
Sbjct: 362 SFPAPAYFPLLYGATYPILRPVLGGFTSEFYVLLLGFISTFYYVFYSYWMGIKNMPKEYW 421

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHLRTT 537
           EV  + ++T W+  R +++P   PY V G  +    AW    + E       G       
Sbjct: 422 EVMDNLNLTFWQRLRRVVIPSAMPYIVAGLTSTVNSAWGGLAIGEYWPDIYDGRTLEVHQ 481

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           GL   +A +  +G    V    ++    V+  + F    L     +  
Sbjct: 482 GLMRELALADSQGKLALVGWLSILFAIVVVIYSLFFTRKLMDLARQKY 529



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 3/197 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            L  +    +T+ RV + II++ +    +G          +     +++L + P   FFP
Sbjct: 4   PLLALLAVGVTVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFP 63

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+          L   L +  L+     W I   +       P +  EVA +  +    
Sbjct: 64  VVLIFFVSDIGGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLG 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P      I +   A     VSEV S G+ +    G+G+ I+  T  G +
Sbjct: 124 KMSKLYIPFSIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLY 183

Query: 553 PEVVLGVLIMCCFVLAL 569
            + +  + I+   V+ +
Sbjct: 184 NQALYALGILAVVVVFI 200


>gi|159041469|ref|YP_001540721.1| binding-protein-dependent transport systems inner membrane
           component [Caldivirga maquilingensis IC-167]
 gi|157920304|gb|ABW01731.1| binding-protein-dependent transport systems inner membrane
           component [Caldivirga maquilingensis IC-167]
          Length = 553

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/538 (19%), Positives = 226/538 (42%), Gaps = 19/538 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+   ++ S++  +     AAK+  +  V + +   ++++P++ F    +V+F+
Sbjct: 14  TLATFTRVAVTILASIVTGWFLGYAAAKNGLVERVFLSVTQTLEAVPVITFFPIVLVFFI 73

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +   G  +G ELA  F +FT+ VWN+    Y+S+  + + LE+V+  ++LS   KF  L 
Sbjct: 74  SSIRG-YLGVELAVDFLVFTAVVWNIWVGEYESIKTVSQSLEDVANMYKLSFIAKFSKLY 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +  N+++S + G F++  SE+I +G     + GIGS I   +        + A
Sbjct: 133 IPVTIPRVAGNVLVSFADGLFYITVSEVIALGTKSYHVFGIGSLIFSWVNVGMWFNAIIA 192

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-------IYPADSWVLYLFRKTNFLRF 297
           ++ ++ ++ +    + RP + W+ K+  +                     L R   +LR 
Sbjct: 193 LIVLVIMVTIVVFGVLRPFVNWAVKYSYDPYAEVMRTGVRRQTPSRIRASLARNVRYLRR 252

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           I  +                     +R   P     L    +            +   ++
Sbjct: 253 ITAAERALIPAFVRATSYAVYHRLTVR---PRPINVLTRFDKYVAAGIGSLLLALIAYSV 309

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +W +    +    Y +    ++   +   R++++ + A +I IP+   +  RP + + 
Sbjct: 310 YSSWSTTWLPIMINIYDNWEVYLYYLGLDWLRILLVTVSAILIAIPINYLMVTRPKLEAV 369

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVIA 470
           + P  + LA+ P + + PLV      Y        ++  + + ++    T WY+++N+  
Sbjct: 370 LLPILEDLASIPVSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTAWYVIYNMYV 429

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW- 529
           G    P    +VA++ +++ W     + +PG  P  +TG  +  G  W    ++E     
Sbjct: 430 GMKTIPRSLWDVANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGLEIAEYFQGI 489

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                   G  A +   T  G+   +    LI+   V+ L+ FLW  L+    +  R+
Sbjct: 490 NGKVYMVHGYTALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTMARQRYRM 547



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 5/252 (1%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++ ++ + +  +     +  ++ I  +      Y     LR+L   V ++L       L 
Sbjct: 301 LLALIAYSVYSSWSTTWLPIMINIYDNWEVYLYYLGLDWLRILLVTVSAILIAIPINYLM 360

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAELAAIFAIFTSQV 147
               +L  VL+PIL+ + SIP+  +L    + F   + +  G  I  E+      F S  
Sbjct: 361 VTRPKLEAVLLPILEDLASIPVSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTA 420

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + ++MY  +  IPR L +V+ +  LS W K   L +P +MP  +  +  ++   W  +
Sbjct: 421 WYVIYNMYVGMKTIPRSLWDVANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGL 480

Query: 208 VASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +E    +   V  + G  + +       +L+ +    L +   + L    L+R +   
Sbjct: 481 EIAEYFQGINGKVYMVHGYTALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTM 540

Query: 267 S-NKFRLERTTG 277
           +  ++R+E    
Sbjct: 541 ARQRYRMEGAIS 552



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 3/213 (1%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T   V+  +     T  RV V I+ + +    +G        +        Q L A P  
Sbjct: 3   TLSIVITSLLATLATFTRVAVTILASIVTGWFLGYAAAKNGLVERVFLSVTQTLEAVPVI 62

Query: 432 VFFPLVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            FFP+V+         +L   L +  L+     W I               ++VA+ + +
Sbjct: 63  TFFPIVLVFFISSIRGYLGVELAVDFLVFTAVVWNIWVGEYESIKTVSQSLEDVANMYKL 122

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +    +  + +P   P      + +         VSEV + G       G+G+ I     
Sbjct: 123 SFIAKFSKLYIPVTIPRVAGNVLVSFADGLFYITVSEVIALGTKSYHVFGIGSLIFSWVN 182

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            G +   ++ ++++   V  +   +  P   + 
Sbjct: 183 VGMWFNAIIALIVLVIMVTIVVFGVLRPFVNWA 215


>gi|297567837|ref|YP_003686808.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946]
 gi|296852286|gb|ADH65300.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946]
          Length = 671

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 146/333 (43%), Positives = 204/333 (61%), Gaps = 3/333 (0%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYAS 66
           P  +  R   + +DL+    V+ ++ +    +Q  T P       + ++LD   LP Y  
Sbjct: 8   PEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTSPNLTVSLDPAHLPYYGL 67

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT LRML+A+++SL+FTFVYAT+AAK  R   VL+PILD +QS+PILGFLT T   F+ L
Sbjct: 68  RTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTATTSIFLGL 127

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G + G E A+IFAIFTSQVWNMTFS Y SL  +P++L+E +   RLS WQ+FW L VP
Sbjct: 128 FRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQRFWKLEVP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           F++P LVWN MMS+SGGWFFVVASE I  V  D    LPG+GSYIALAI++ +  A+LYA
Sbjct: 188 FALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQANTHAMLYA 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
            +T+  ++ LYDQL FRP++ W+ KF+ E++     A SWVL L ++    + I      
Sbjct: 248 GVTLFLLVLLYDQLFFRPIVAWAEKFKFEQSESSDTAQSWVLTLLKRARLSQRIARLPQP 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
            +  L     +  R    +     +      ++
Sbjct: 308 LWEWLWLKSARRNRPGEALEPPPQQRGRARLAD 340



 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 106/217 (48%), Positives = 141/217 (64%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ +V  V+  G  T  RV   +++ +++W+PVG++IG RP ++   QP AQ  AAFPA
Sbjct: 454 VSWPEVPEVLKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAAFPA 513

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FPL V  ++++ LNP +W+S LM+ G QWYILFNVIAG  A PND KE A  + + G
Sbjct: 514 NLLFPLFVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYRLRG 573

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  WR ++LP IFP +VTG ITA GG+WNASIV+EV  WG+  L  TGLGAYIA  +   
Sbjct: 574 WGLWRRLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWSTGE 633

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             P V LG+L+M   VLA NR +W  LY       RL
Sbjct: 634 FNPHVGLGMLVMGLLVLAYNRLIWRRLYQLAEERYRL 670



 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 5/213 (2%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +Y   T LR+   +++  L             RL     P+     + P          
Sbjct: 463 LKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAAFPANLLFPL--- 519

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+       +  E+     +     W + F++      IP DL+E +R +RL GW  + 
Sbjct: 520 -FVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYRLRGWGLWR 578

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P   P  V   + +  G W   + +E++  G+T +   G+G+YIA     +    +
Sbjct: 579 RLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWSTGEFNPHV 638

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273
              ML M  ++  Y++L++R +   +  ++RL+
Sbjct: 639 GLGMLVMGLLVLAYNRLIWRRLYQLAEERYRLD 671



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 93/272 (34%), Gaps = 11/272 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVL 377
           +R  FP             + L +    +V      +A Q         +       D  
Sbjct: 1   MRRVFPSPEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTSPNLTVSLDPA 60

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF--- 434
           ++ + G  T+ R++  ++++ +            P     + P    L + P   F    
Sbjct: 61  HLPYYGLRTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTAT 120

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             + +                 +     W + F+  A     P + +E A+   ++ W+ 
Sbjct: 121 TSIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQR 180

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTEKGS 551
           +  + +P   P+ V  A+ +  G W   + SE  +           G+G+YIA + ++ +
Sbjct: 181 FWKLEVPFALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQAN 240

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              ++   + +   VL  ++  + P+  +  +
Sbjct: 241 THAMLYAGVTLFLLVLLYDQLFFRPIVAWAEK 272


>gi|167737269|ref|ZP_02410043.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
          Length = 292

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 152/274 (55%), Positives = 198/274 (72%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
              D +A +LV+ +I +   G+++  +P D+     I+L   +LP YA RT LRML+A+ 
Sbjct: 19  GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            S +FTF YATLAAKSR    VL+P+LD++QS+PILG+L+FTV +F+++ PG  +GAELA
Sbjct: 79  ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AIFAIFTSQ WNM FS YQSL  +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M
Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +SMSGGWFFVVASE I VG   I LPGIG+Y+A AI E+DL A+ +A+  M   I LYDQ
Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           LLFRPM+ W++KFR ++T       SW+L L  +
Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHR 292



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L+    +     L +    ++ G  +      +            L +      T+ 
Sbjct: 12  RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444
           R++  +  + +                + + P   +L + P   +    V+         
Sbjct: 72  RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   L     +     W + F+        P+D  E + S   TGW+ +  + +P   P
Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V  A+ +  G W   + SE  S G + +   G+GAY+A +  +     V   +  M  
Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251

Query: 565 FVLALNRFLWHPLYLYGTR 583
            +   ++ L+ P+  +  +
Sbjct: 252 AIALYDQLLFRPMVAWAHK 270


>gi|167010888|ref|ZP_02275819.1| ABC transporter permease protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254366877|ref|ZP_04982915.1| ABC transporter, permease protein [Francisella tularensis subsp.
           holarctica 257]
 gi|134252705|gb|EBA51799.1| ABC transporter, permease protein [Francisella tularensis subsp.
           holarctica 257]
          Length = 396

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 197/371 (53%), Gaps = 14/371 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++   L++ +  +  +   +      D   +  I+LD   LP Y  RTT+R++  M+ SL
Sbjct: 1   MIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+P  ++G E AAIF
Sbjct: 61  IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 120

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IFTSQ WN+   +YQ++  +P +L E   +F+L+ WQ+FW + +P+S+PGL+WN+M+S 
Sbjct: 121 GIFTSQAWNIALILYQTIRIVPAELTEAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 180

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLGVIFLYDQLL 259
           S  WF + ASE I      + LPGIGSYIAL + + +++AI  YA++ ++  I L+DQLL
Sbjct: 181 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 240

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
           FRP++ WS KF+ E        + W+   ++K+  +  I          L N    L + 
Sbjct: 241 FRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLINGASFLNKK 300

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
              I    P   +++      +      W+ V+    +        +    F   D+ Y+
Sbjct: 301 ---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF----FPDGDMSYL 348

Query: 380 IWLGCITMFRV 390
           I L   T+  +
Sbjct: 349 IPLMIETIRHM 359



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 10/250 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIAS 398
           + I    ++       AW  +       +       D  ++ +    T  R+++ +I + 
Sbjct: 1   MIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 60

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSL 454
           I  + VG       H +    P    L + P   F        +    +  +        
Sbjct: 61  IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 120

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     W I   +       P +  E  ++F +  W+ +  I LP   P  +   + + 
Sbjct: 121 GIFTSQAWNIALILYQTIRIVPAELTEAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 180

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFL 573
             AW A   SE        +   G+G+YIA      +   +    ++ +   ++  ++ L
Sbjct: 181 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 240

Query: 574 WHPLYLYGTR 583
           + PL  +  +
Sbjct: 241 FRPLVKWSEK 250


>gi|16082188|ref|NP_394633.1| hypothetical protein Ta1177 [Thermoplasma acidophilum DSM 1728]
 gi|10640488|emb|CAC12302.1| hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 541

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 112/534 (20%), Positives = 226/534 (42%), Gaps = 25/534 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T  R+L  ++IS++  +  A  A K +    + + I+++ +S+P++ F    ++ F+
Sbjct: 11  ALATAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFFPIVLIIFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G E+AA F +FT+ VWN+    YQ+   +PR++ EV+ ++++S   K   + 
Sbjct: 71  TRIGGP-LGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFLTKMRRIF 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PFS P +  N+  S+S G+F++  SE+  VG       GIG+ +  ++     + ++Y 
Sbjct: 130 IPFSYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGT-VLDSLAASGQIRLIYV 188

Query: 245 MLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
            L +L  + +   +  R    ++ +K+ ++    I       L + + T  L  +  +  
Sbjct: 189 ALGILAAVIIVIIIGLREFSRYAVSKYTVDTDAPIIRRGR--LNVKQTTRLLSVVARN-- 244

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
               PLS                  E   +    +++S  + +    ++ G+ +  A   
Sbjct: 245 ----PLSRLAGYYRSRTLSRPPEVFEKHEK--RKEKISRYISVAIGVIILGLILYSAVTL 298

Query: 364 IGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           I  + +      +     ++        RV V++ I+ +I I +G ++           P
Sbjct: 299 IVSVPHSEWGRLFNLTPKIMLYLLYDYLRVGVILAISFVISIFLGYYLAMHSRAEGIGVP 358

Query: 421 FAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
             Q L+A+P  ++FP + +         +      +++  L    T +YI ++   G  A
Sbjct: 359 IIQTLSAYPPPIYFPFIFAASFAFIHGVFGPFTDEVYVLSLGFVSTFYYIFYSFWMGVKA 418

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGH 531
            P ++ EV  + ++  +   R IILPG FPY ++G  +    AW   ++ E       GH
Sbjct: 419 LPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVSGH 478

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                 GL  +I   T  G+      G  I    V   +      +     +  
Sbjct: 479 SLEVHFGLMKFIDVETNAGNIALAGWGSFIFGIVVAVYSILFTRRMMDLARKRY 532



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             +   V+++G+I      +  +    +   +    L    +  Y     LR+   + IS
Sbjct: 279 ISVAIGVIILGLILYSAVTLIVSVPHSEWGRL--FNLTPKIML-YLLYDYLRVGVILAIS 335

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            + +       A   R   + VPI+  + + P   +  F        +   V G     +
Sbjct: 336 FVISIFLGYYLAMHSRAEGIGVPIIQTLSAYPPPIYFPFIFAA-SFAFIHGVFGPFTDEV 394

Query: 140 FAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +   F S  + + +S +  +  +P +  EV ++  +  + +   + +P + P L+  +
Sbjct: 395 YVLSLGFVSTFYYIFYSFWMGVKALPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGI 454

Query: 197 MMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +++  W  ++  E    IV G ++    G+  +I +     ++    +       V+ 
Sbjct: 455 SSTINSAWGGLMIGEYWPDIVSGHSLEVHFGLMKFIDVETNAGNIALAGWGSFIFGIVVA 514

Query: 254 LYDQLLFRPMIVWSNK 269
           +Y  L  R M+  + K
Sbjct: 515 VYSILFTRRMMDLARK 530



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 3/188 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L +      T  RV+ LI+I+ +    +           +      ++  + P   FF
Sbjct: 3   EILLITLAALATAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFF 62

Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V+          L   +    L+     W I           P +  EVA ++ ++  
Sbjct: 63  PIVLIIFVTRIGGPLGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              R I +P  +P        +    +    VSEV S G    +T G+G  +      G 
Sbjct: 123 TKMRRIFIPFSYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGTVLDSLAASGQ 182

Query: 552 FPEVVLGV 559
              + + +
Sbjct: 183 IRLIYVAL 190


>gi|15920813|ref|NP_376482.1| hypothetical protein ST0594 [Sulfolobus tokodaii str. 7]
 gi|15621597|dbj|BAB65591.1| 544aa long hypothetical protein [Sulfolobus tokodaii str. 7]
          Length = 544

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 106/531 (19%), Positives = 212/531 (39%), Gaps = 21/531 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T  R+   ++ S+   +  A  + K++    + V ++++ +S+P+  F    +++F+
Sbjct: 16  SLVTIGRVWVTILFSIFSGWFLAYASIKNKIFENIYVSLIEVFESVPVFSFFPIVLIFFI 75

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G E A +F +FT+  WN+    YQ+   +P DL EVS ++RL  W     L 
Sbjct: 76  YDIGGS-LGVEFAVLFLVFTAVTWNIWMGEYQAFKTVPEDLLEVSENYRLKFWGTMTKLY 134

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PFS+P +  N++ S +   F++  SE+  VG     + GIG+ IA  + E +    LY 
Sbjct: 135 IPFSIPRIAANLIPSFADALFYITVSEVFAVGTHTYQVFGIGTVIANLVSEGEYTDALYG 194

Query: 245 MLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           +  +L +  +   LL R    +S  ++ L+    I       ++    T  +  + Y + 
Sbjct: 195 I-AVLAIFTIAITLLLREFSKYSVERYGLDTEISIRKRGR--IHFGYSTRLVSALSYPAK 251

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
              + +     +L   +          +    S      +L  F         I +   +
Sbjct: 252 --LAKVFPTPIRLRSNIKEEDEEKEHKYFWKISGIVAGVLLLAFILYGAISTIISVPLST 309

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
            GY+++      +  +         RV ++ +++ +  I VG ++         + P  Q
Sbjct: 310 WGYLISTLPSDLISILF-----DYIRVGIIALLSFVFAIFVGYYLTTHEKTEKIVIPIIQ 364

Query: 424 LLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             +A PA  ++PL +          +       ++  L    T +Y+ ++   G    P 
Sbjct: 365 AYSAIPAPAYYPLFLLVTLPFIHSIFGPFTNEFYVLFLGFISTFYYVFYSFWIGVKNLPQ 424

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHL 534
            + E+  ++    W+  RY+I+PG FPY + G  +    AW    + E        +   
Sbjct: 425 QYWEIMKNYDFKFWQKLRYVIIPGTFPYIIAGLSSTINSAWGGLAIGEYWPDIIQNYNLE 484

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             TG+   I  +T +G+        LI    V   +      L     +  
Sbjct: 485 VHTGMMKLIDVATNEGNIVLASWVSLIFGIIVAVYSILFTRKLMDLARKKY 535



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 4/215 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++  I    +T+ RV V I+ +      +           +      ++  + P   FFP
Sbjct: 9   LITFILASLVTIGRVWVTILFSIFSGWFLAYASIKNKIFENIYVSLIEVFESVPVFSFFP 68

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+    Y     L     +  L+     W I           P D  EV+ ++ +  W 
Sbjct: 69  IVLIFFIYDIGGSLGVEFAVLFLVFTAVTWNIWMGEYQAFKTVPEDLLEVSENYRLKFWG 128

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P      I +   A     VSEV + G    +  G+G  IA    +G +
Sbjct: 129 TMTKLYIPFSIPRIAANLIPSFADALFYITVSEVFAVGTHTYQVFGIGTVIANLVSEGEY 188

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + + G+ ++  F +A+   L      Y      L
Sbjct: 189 TDALYGIAVLAIFTIAIT-LLLREFSKYSVERYGL 222


>gi|302348739|ref|YP_003816377.1| ABC transporter, putative [Acidilobus saccharovorans 345-15]
 gi|302329151|gb|ADL19346.1| ABC transporter, putative [Acidilobus saccharovorans 345-15]
          Length = 542

 Score =  262 bits (671), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 124/533 (23%), Positives = 231/533 (43%), Gaps = 27/533 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             TT R+   + +S++  ++   LA KSR    V V + ++++S+P++ F    +++F++
Sbjct: 15  LATTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVLIFFVD 74

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G  IG ELA  F +FT+ VWN+   +YQ+   +P  + EV+ + R     K   L +
Sbjct: 75  R-IGGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMRRLYI 133

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PFSMP +  N++ S +  +F++  SE+  +G T   + GIGS IA  + E  L  + Y++
Sbjct: 134 PFSMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYVYYSL 193

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L +  +I      L R    W+     +      P  +      R  +  RF  Y++   
Sbjct: 194 LGLAMLIAGVIFAL-RNFANWAVA---KYGLDTPPRSAHPGVRTRWRSLSRF--YAAARP 247

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              ++    +  R + + R    +      S +++ + L I    ++  +  G A  ++ 
Sbjct: 248 LRVITTVTSRPVRAVPLRRVERIQ-----LSERQLDWALRIVGAVLLLLIIYGAAKAALS 302

Query: 366 YIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             V   T+  +L   W   + +     RV V+ +I+  I + VG ++ F     +   P 
Sbjct: 303 --VKPSTWNYLLSNTWPIIVGLAYDYARVAVITLISFAIAVFVGYYLAFHRRAEAVFIPL 360

Query: 422 AQLLAAFPANVFFPL------VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q L+A PA  +FPL       +   ++      L++  L    T +YI +    G  A 
Sbjct: 361 IQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELYVLFLGFVSTFYYIFYAYWMGIKAV 420

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532
           P++  E+  + ++  ++  R I++PG  PY VTG  +    AW   ++ E          
Sbjct: 421 PHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLTSTIDSAWGGLMIGEYWPDIIGDKT 480

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              + G+   +  +T +G+        LI    V+A        L     R  
Sbjct: 481 LEVSHGILKILDVATNEGNIALAAYASLIFGIVVVAFALLFTRHLLEISRRKY 533



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 99/255 (38%), Gaps = 5/255 (1%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D    ++   ++ ++++G  +  +         +  +   +    +    R+    +IS
Sbjct: 277 LDWALRIVGAVLLLLIIYGAAKAALSVKPSTWNYLLSNTWPIIVGLAYDYARVAVITLIS 336

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA--ELA 137
                      A  RR   V +P++  + ++P   +     +    +      G   EL 
Sbjct: 337 FAIAVFVGYYLAFHRRAEAVFIPLIQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELY 396

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F  F S  + + ++ +  +  +P ++ E+  +  +  +++   + +P ++P +V  + 
Sbjct: 397 VLFLGFVSTFYYIFYAYWMGIKAVPHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLT 456

Query: 198 MSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            ++   W  ++  E    I+   T+    GI   + +A  E ++    YA L    V+  
Sbjct: 457 STIDSAWGGLMIGEYWPDIIGDKTLEVSHGILKILDVATNEGNIALAAYASLIFGIVVVA 516

Query: 255 YDQLLFRPMIVWSNK 269
           +  L  R ++  S +
Sbjct: 517 FALLFTRHLLEISRR 531



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 70/204 (34%), Gaps = 8/204 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T  RV + I ++ +    +G          S     +++L + P   FFP+V+
Sbjct: 10  IALAILATTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVL 69

Query: 439 SCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                    ++   L +  L+     W I   +       P    EVA +         R
Sbjct: 70  IFFVDRIGGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMR 129

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG----- 550
            + +P   P      I +   A+    VSEV S G       G+G+ IA+   +G     
Sbjct: 130 RLYIPFSMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYV 189

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574
            +  + L +LI        N   W
Sbjct: 190 YYSLLGLAMLIAGVIFALRNFANW 213


>gi|224456411|ref|ZP_03664884.1| ABC transporter permease family protein [Francisella tularensis
           subsp. tularensis MA00-2987]
          Length = 330

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 182/314 (57%), Gaps = 2/314 (0%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
               +R  PN  D++   L++ +  +  +   +      D   +  I+LD   LP Y  R
Sbjct: 6   TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT+R++  M+ SL+F  +     AK++    V +PI++ ++S P+LGFLTFT  +F+ L+
Sbjct: 66  TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  ++G E AAIF IFTSQ WN+   +YQ++  +P +L E + +F+L+ WQ+FW + +P+
Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246
           S+PGL+WN+M+S S  WF + ASE I      + LPGIGSYIAL + + +++AI  YA++
Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALV 245

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ++  I L+DQLLFRP++ WS KF+ E        + W+   ++K+  +  I        
Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIV 305

Query: 307 SPLSNNVKKLCRTL 320
             L N    L + L
Sbjct: 306 FWLINGASFLNKKL 319



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 10/250 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIAS 398
           + I    ++       AW  +       +       D  ++ +    T  R+++ +I + 
Sbjct: 19  VIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 78

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSL 454
           I  + VG       H +    P    L + P   F        +    +  +        
Sbjct: 79  IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 138

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     W I   +       P +  E A++F +  W+ +  I LP   P  +   + + 
Sbjct: 139 GIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 198

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFL 573
             AW A   SE        +   G+G+YIA      +   +    ++ +   ++  ++ L
Sbjct: 199 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 258

Query: 574 WHPLYLYGTR 583
           + PL  +  +
Sbjct: 259 FRPLVKWSEK 268


>gi|148658632|ref|YP_001278837.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148570742|gb|ABQ92887.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 670

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 152/365 (41%), Positives = 215/365 (58%), Gaps = 12/365 (3%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYASR 67
             +  R     +DL+   LVI  I +L    Q  + P D     + ++L+  +LP Y  R
Sbjct: 9   GVLRPRFKLTPWDLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPANLPYYGLR 68

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  RM  A+++SLLFTF  ATLAAKSRR  +V++P LD +QS+PILGFLT T   F+ ++
Sbjct: 69  TVFRMFLAVLLSLLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVTTAIFLGMF 128

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G ++G E A+IFAIFTSQVWNM FS Y SL   PR+L+E +   RLS W+KFW L VPF
Sbjct: 129 RGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKKFWKLEVPF 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +MPGL+WN MMS+SGGWFFVVASE+I V   D    LPG+GSY+ LAI++ D+ A++YA 
Sbjct: 189 AMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQADVAAMVYAG 248

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           LT+L +I +YDQL+FRP++ WS KF+ E++     A SW+L L +++     +G      
Sbjct: 249 LTLLIIILIYDQLIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGIASSLGALGAAI 308

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              +          + +   H         S + +   +D  W+ +V   A+   W    
Sbjct: 309 RQSI---------PVRLTGDHPGPRVEPQPSLRPIDRAIDRIWYALVIAAALWAVWFLAT 359

Query: 366 YIVNH 370
           Y+   
Sbjct: 360 YMFGP 364



 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 111/217 (51%), Positives = 141/217 (64%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ +VL  +WLG +T  RVV+ I I++++W P+G+WIG RP ++  +QP AQ  AAFPA
Sbjct: 453 VSWSEVLECLWLGLLTTMRVVIWIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPA 512

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  ++ Y L  NL+ + LMI G QWYILFNVIAG  + PND KE A    + G
Sbjct: 513 NLLFPIAVVLIATYALPQNLFQAPLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRG 572

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W WWR +I+P IFP +VTG ITA GG+WNASIVSEV SWG   L  TGLGAYIA  +   
Sbjct: 573 WAWWRKLIIPAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGE 632

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             P V LG+L+M   VL  NR  W  LY       RL
Sbjct: 633 FNPHVGLGMLVMGLLVLGFNRLFWRRLYALAETRFRL 669



 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 5/209 (2%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             TT+R++  + IS L             R+   + P+     + P        VV    
Sbjct: 466 LLTTMRVVIWIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPANLLFPIAVV---- 521

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L     +   L     +     W + F++     +IP DL+E +R   L GW  +  L +
Sbjct: 522 LIATYALPQNLFQAPLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLII 581

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P  V   + +  G W   + SE++  G T + L G+G+YIA     +    +   M
Sbjct: 582 PAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGM 641

Query: 246 LTMLGVIFLYDQLLFRPMIVWSN-KFRLE 273
           L M  ++  +++L +R +   +  +FRL+
Sbjct: 642 LVMGLLVLGFNRLFWRRLYALAETRFRLD 670



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 98/272 (36%), Gaps = 11/272 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVL 377
           +R  FP+  +     +   + L +    +V  + + +A+Q      +  T       +  
Sbjct: 1   MRVTFPDAGVLRPRFKLTPWDLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPA 60

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF--- 434
            + + G  T+FR+ + ++++ +    V             I P    L + P   F    
Sbjct: 61  NLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVT 120

Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             + +       L         +     W + F+        P + +E A+   ++ W+ 
Sbjct: 121 TAIFLGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKK 180

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTEKGS 551
           +  + +P   P  +   + +  G W   + SEV S           G+G+Y+  + E+  
Sbjct: 181 FWKLEVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQAD 240

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              +V   L +   +L  ++ ++ P+  +  +
Sbjct: 241 VAAMVYAGLTLLIIILIYDQLIFRPIVAWSEK 272


>gi|156740134|ref|YP_001430263.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156231462|gb|ABU56245.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 671

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 153/366 (41%), Positives = 216/366 (59%), Gaps = 13/366 (3%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI--VPITLDVHSLPQYAS 66
             +  R+   ++D++   L+I II +L    Q  + P D+     + ++LD  +LP Y  
Sbjct: 9   GVLRPRLKLTLWDVVVIPLIIVIILLLTIAFQGASQPFDVAATPDLTVSLDPINLPYYGL 68

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT  RM  A+++SLLFTF  ATLAAKSRR   V++P LD +QS+PILGFLT T   F+ +
Sbjct: 69  RTVFRMFLAVLLSLLFTFTVATLAAKSRRAETVIIPALDFLQSLPILGFLTVTTAIFIGM 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G ++G E A+IFAIFTSQVWNM FS Y SL   PR+L E +   RLS W+KFW L VP
Sbjct: 129 FRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELREAAAVLRLSPWKKFWNLDVP 188

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           F+MPGL+WN MMS+SGGWFFVVASE+I V   D    LPGIGSYIALAI++ D+ A++YA
Sbjct: 189 FAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGIGSYIALAIEQADIGAMVYA 248

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
            LT+L +I +YDQ++FRP++ WS KF+ E++     A SW+L L +++ F   +      
Sbjct: 249 GLTLLIIILIYDQVIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGFAGSLSAIGAA 308

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
               +             +R             + +   +D  W+ +V  V +   W   
Sbjct: 309 IRRSVPTI---------PVREVPGSPVEVQPDPRPIDRAIDRVWYAIVIAVTLWAVWVLA 359

Query: 365 GYIVNH 370
            Y+   
Sbjct: 360 TYMFGS 365



 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 111/217 (51%), Positives = 140/217 (64%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             + +VL  +WLG +T  RVV+ I I++++W P+G+WIG RP ++   QP AQ  AAFPA
Sbjct: 454 VAWSEVLECLWLGLLTTVRVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPA 513

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N+ FP+ V  ++ Y L  NL+ + LMI G QWYILFNVIAG  + PND KE A    + G
Sbjct: 514 NLLFPVAVVLIATYALPQNLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRG 573

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W WWR +I+P IFP +VTG ITA GG+WNASIVSEV SWG   L  +GLGAYIA  +   
Sbjct: 574 WAWWRKLIIPAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGE 633

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             P V LG+L+M   VLA NR  W  LY       RL
Sbjct: 634 FNPHVGLGMLVMGSLVLAFNRLFWRWLYALAETRFRL 670



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 5/209 (2%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             TT+R++  + IS L             R+     P+     + P        VV    
Sbjct: 467 LLTTVRVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPANLLFPVAVV---- 522

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L     +   L     +     W + F++     +IP DL+E ++   L GW  +  L +
Sbjct: 523 LIATYALPQNLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLII 582

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P  V   + +  G W   + SE++  G T + L G+G+YIA     +    +   M
Sbjct: 583 PAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGM 642

Query: 246 LTMLGVIFLYDQLLFRPMIVWSN-KFRLE 273
           L M  ++  +++L +R +   +  +FRL+
Sbjct: 643 LVMGSLVLAFNRLFWRWLYALAETRFRLD 671



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 81/215 (37%), Gaps = 6/215 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D + + + G  T+FR+ + ++++ +    V           + I P    L + P   F 
Sbjct: 59  DPINLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAETVIIPALDFLQSLPILGFL 118

Query: 435 ----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                + +       L         +     W + F+        P + +E A+   ++ 
Sbjct: 119 TVTTAIFIGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELREAAAVLRLSP 178

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTE 548
           W+ +  + +P   P  +   + +  G W   + SEV S           G+G+YIA + E
Sbjct: 179 WKKFWNLDVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGIGSYIALAIE 238

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +     +V   L +   +L  ++ ++ P+  +  +
Sbjct: 239 QADIGAMVYAGLTLLIIILIYDQVIFRPIVAWSEK 273


>gi|48478103|ref|YP_023809.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM
           9790]
 gi|48430751|gb|AAT43616.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM
           9790]
          Length = 537

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 111/533 (20%), Positives = 215/533 (40%), Gaps = 27/533 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              TT+R+L   ++S++  +  A  A KS+    + + ++++ +S+P++ F    +V F+
Sbjct: 11  TGATTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPIVLVIFI 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G ELAA F +FT+ VWN+  + YQ+   +PR++EEV  +  L  + K   L 
Sbjct: 71  TRIGGP-LGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGKLSKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PFS+P +  N+  S+S G+F++  SE+I VG       GIG+ +        L     +
Sbjct: 130 IPFSIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGTLLTDFSNNIFLTE--MS 187

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +L M   +     LL         ++ L+              + R+            +
Sbjct: 188 LLGMSFFVIATIALLREYTKRAVARYTLDTDAP----------IIRRGRLNTRQTSRIAS 237

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             S   N   +L            E F +L   ++    + I     +  + +  +   I
Sbjct: 238 VISK--NPFSRLSSYYRYQNLDIEEKFEKLEKKKKYYRYVYIAIGLFILILLLYGSASLI 295

Query: 365 GYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +      + +     +I        RV  +++I+  I I +G ++       S   P 
Sbjct: 296 ISVKADQWFYLFSKTPEIIIYLAYDYARVATILLISLAIAIFLGYYLAVNKRAESVGIPI 355

Query: 422 AQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q L+A+PA ++FP V           +       ++  +    T +Y+ ++   G  A 
Sbjct: 356 IQTLSAYPAPIYFPFVFIFTLPFISKFFGPYTDEFYVLAIGFISTFYYVFYSFWMGVKAL 415

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532
           P+++ E+  + ++  ++  RYII+P  FPY ++G  +    AW   ++ E          
Sbjct: 416 PSEYWELMKNMNMGYFKKMRYIIIPAAFPYLISGISSTINSAWGGLMIGEYWPNIYGDKS 475

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
               TGL   I  +T  G+         I    V+  +      +     +  
Sbjct: 476 LYVHTGLMKLIDVATANGNIELAAWASFIFSIVVVIYSILFTRKMMDLARKKY 528



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 88/212 (41%), Gaps = 7/212 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y +    R+ + ++ISL          A ++R   V +PI+  + + P   +  F V  F
Sbjct: 316 YLAYDYARVATILLISLAIAIFLGYYLAVNKRAESVGIPIIQTLSAYPAPIYFPF-VFIF 374

Query: 124 MNLYPGKVIGAELAAIFAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              +  K  G      + +   F S  + + +S +  +  +P +  E+ ++  +  ++K 
Sbjct: 375 TLPFISKFFGPYTDEFYVLAIGFISTFYYVFYSFWMGVKALPSEYWELMKNMNMGYFKKM 434

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQD 237
            Y+ +P + P L+  +  +++  W  ++  E    I    ++    G+   I +A    +
Sbjct: 435 RYIIIPAAFPYLISGISSTINSAWGGLMIGEYWPNIYGDKSLYVHTGLMKLIDVATANGN 494

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +    +A      V+ +Y  L  R M+  + K
Sbjct: 495 IELAAWASFIFSIVVVIYSILFTRKMMDLARK 526



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 5/200 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L +      T  RV+ L +++ +    +        +  +      ++  + P   FFP+
Sbjct: 5   LLIFLATGATTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPI 64

Query: 437 VVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+          L   L    L+     W I           P + +EV  +  +  +  
Sbjct: 65  VLVIFITRIGGPLGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGK 124

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P        +    +    VSEV   G    +T G+G  + + +      
Sbjct: 125 LSKLYIPFSIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGTLLTDFSNNIFLT 184

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           E+   +L M  FV+A    L
Sbjct: 185 EM--SLLGMSFFVIATIALL 202


>gi|257075954|ref|ZP_05570315.1| sugar ABC transporter 1, permease protein [Ferroplasma acidarmanus
           fer1]
          Length = 540

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/537 (20%), Positives = 222/537 (41%), Gaps = 34/537 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R++  +++S+L  +  A  + KS+    + + ++++ +SIP++ F    +V F+ 
Sbjct: 12  LATAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFPVVLVIFIT 71

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G  +G ELAA F +FT+ VWN+    YQ+   +PR++ EV  + R   + +  YL +
Sbjct: 72  HV-GGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFSRLRYLYI 130

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           PFS+P +  N+  S+S G+F++  SE+  VG       GIGS +   +    L  I  A+
Sbjct: 131 PFSVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQLFNIEMAL 190

Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           L +LG++ +   ++ R    ++  ++ L+    +       L               +  
Sbjct: 191 L-ILGIVIVAIVIVLREFSKYAVGRYTLDTDAPVMKRGRLNL-------------RETAR 236

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F+ LS N   L R     ++   +   Q    +        + +  +  + +      +
Sbjct: 237 VFAALSKNP--LTRLARYYKYREGDKHEQTYEKKEKKQKRYKYIYASIGIIILIALLYGV 294

Query: 365 GYIVNHFTYQDV-------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             ++      +         +++        RV  +++++ +I I +G ++         
Sbjct: 295 VSLIISVKPSEWSILFNKTPFLLTGLGFDYVRVGSILLVSMVIAIFLGYYLAVNKRAEKY 354

Query: 418 IQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             P  Q L+A+PA ++FP +           +      L++  L    T +Y+ ++   G
Sbjct: 355 WIPIIQSLSAYPAPIYFPFLFILTEPFMLSLFGGFTNELYVLSLGFVSTFYYVFYSFWMG 414

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---AS 528
             A P+++ E+  +  +  ++  R +I+P  FPY ++G  +    AW   ++ E      
Sbjct: 415 VKAMPSEYWEITKNLKLGYFKKMRKVIIPSTFPYLISGISSTINSAWGGLMIGEYWPNIY 474

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             H     TGL   I  +T  G       G LI    V   +      +     +  
Sbjct: 475 GTHSLSVHTGLMKTIDIATANGDLTLAAWGSLIFGIIVAIYSVLFTRKMMDLAQKKY 531



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 3/191 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++ +I     T  RV+ LI+++ +    +           +      ++  + P   FFP
Sbjct: 4   IILIILAVLATAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFP 63

Query: 436 LVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+          L   L    L+     W I           P +  EV  +     + 
Sbjct: 64  VVLVIFITHVGGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFS 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ +P   P        +    +    VSEV   G    +T G+G+ +         
Sbjct: 124 RLRYLYIPFSVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQL 183

Query: 553 PEVVLGVLIMC 563
             + + +LI+ 
Sbjct: 184 FNIEMALLILG 194


>gi|13541218|ref|NP_110906.1| ABC-type nitrate transport permease [Thermoplasma volcanium GSS1]
 gi|14324606|dbj|BAB59533.1| ABC transport system ATP-binding protein PA [Thermoplasma volcanium
           GSS1]
          Length = 541

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/534 (20%), Positives = 219/534 (41%), Gaps = 25/534 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+L  ++IS++  +  A LA K +    + + ++++ +S+P++ F    ++ F+
Sbjct: 11  TLATAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFPIVLIIFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G ELAA F +FT+ VWN+    YQ+   +P+++ EV+ ++R+S   +   + 
Sbjct: 71  TRIGGP-LGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLSRMARIY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PFS P +  N+  S+S G+F++  SE+  VG       GIGS +           +  A
Sbjct: 130 IPFSYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGSVLDSLAPTGKTNYVYLA 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVW-SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           +L +  VI     +L R    +  +K+ ++    I       L + + T  L  I  +  
Sbjct: 190 LLVLAVVIGAIIYIL-REFSRYVVSKYTIDTDAPIIRRGR--LSVKQTTRILSVIATN-- 244

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
               PLS                  E        +++   +      ++  + +  A+  
Sbjct: 245 ----PLSRLAGYYRSRYPGQNSEVFEK--DEYPQRKIGSYVMSGIGIIILILLVYSAYSV 298

Query: 364 IGYIVNHFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           I        ++ V     ++        RV  +++++ II I +G  +           P
Sbjct: 299 ISATPTALWHKLVSITPRIVVYLLYDYGRVATILVVSFIISIFLGYSLAIHTRAEGIGVP 358

Query: 421 FAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
             Q+L+A+P  ++FP V +            +    ++  L    T +Y+ ++   G  A
Sbjct: 359 LLQVLSAYPPPIYFPFVFAASYTWIHNLMGPVTNEFFVIGLGFISTFYYMFYSFWMGVKA 418

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGH 531
            P+++ EV  + ++  ++  R IILPG FPY ++G  +    AW   ++ E         
Sbjct: 419 LPSEYFEVMKNLNLGFFKKMRMIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVGDK 478

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                 G+  +I   TE G+         I    V+  +      +     +  
Sbjct: 479 TLQIHYGIMKFIDIQTEAGNIAYAGWASFIFGIVVVIYSILFTRRMMDLARKRY 532



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 7/212 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y      R+ + +V+S + +       A   R   + VP+L ++ + P   +  F     
Sbjct: 320 YLLYDYGRVATILVVSFIISIFLGYSLAIHTRAEGIGVPLLQVLSAYPPPIYFPFVFAA- 378

Query: 124 MNLYPGKVIGAELAAIFAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              +   ++G      F I   F S  + M +S +  +  +P +  EV ++  L  ++K 
Sbjct: 379 SYTWIHNLMGPVTNEFFVIGLGFISTFYYMFYSFWMGVKALPSEYFEVMKNLNLGFFKKM 438

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQD 237
             + +P + P L+  +  +++  W  ++  E    IV   T+    GI  +I +  +  +
Sbjct: 439 RMIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVGDKTLQIHYGIMKFIDIQTEAGN 498

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +    +A      V+ +Y  L  R M+  + K
Sbjct: 499 IAYAGWASFIFGIVVVIYSILFTRRMMDLARK 530



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 3/201 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL +I     T  RV+ LI+I+ +    +           +      ++  + P   FFP
Sbjct: 4   VLLIILATLATAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFP 63

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+          L   L    L+     W I           P +  EVA ++ ++   
Sbjct: 64  IVLIIFVTRIGGPLGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLS 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I +P  +P        +    +    VSEV + G     T G+G+ +      G  
Sbjct: 124 RMARIYIPFSYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGSVLDSLAPTGKT 183

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V L +L++   + A+   L
Sbjct: 184 NYVYLALLVLAVVIGAIIYIL 204


>gi|70606098|ref|YP_254968.1| ABC transporter [Sulfolobus acidocaldarius DSM 639]
 gi|68566746|gb|AAY79675.1| ABC transporter [Sulfolobus acidocaldarius DSM 639]
          Length = 543

 Score =  254 bits (649), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 119/536 (22%), Positives = 221/536 (41%), Gaps = 27/536 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+   + +S++  +    LA KS  +  + V +++I +S+P+  FL   +++F+
Sbjct: 11  TLFTLGRVWITIALSIITGWFLGYLAIKSHVVENIYVSLIEIFESVPVFSFLPIVLIFFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +G +LA +F +FT+ VWN+   +YQ+   IP+D+ EVS ++R S   KF  L 
Sbjct: 71  FTIGGN-LGIQLAVLFLVFTAVVWNIWMGIYQAYKTIPQDMLEVSENYRFSLMDKFSKLY 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+SMP +  N+  S     F++  SE+  +G++   + GIGS I   +        L  
Sbjct: 130 IPYSMPRIASNLFPSFVNALFYITVSEVFSIGNSQYQVFGIGSLINYFVNNGLYNDALIG 189

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           ++ ++  + ++  L+ R +         E     +  D+ +    RK   L     S  +
Sbjct: 190 IVILIIWVIIF-TLVLRELA--------EYIISRFGLDTEIKV--RKRGRLSIRYSSRIS 238

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
                   + K        R        +     R + +       +   +   I + SI
Sbjct: 239 SGLSTIVKLGKAFTIPVARRSVRQVRVEEEKERSRAANLWKYVGISISVLILSFILYGSI 298

Query: 365 GYIVN------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             I++       +   +  + +    +   RV V+ +I+ +I I +G +I     I   I
Sbjct: 299 SVIISVPLATWSYLVSNTPFALLSIAVDYIRVAVVTLISLLITIFLGYFIVVHKRIERVI 358

Query: 419 QPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            P  Q++AA PA V+FP + +         +       ++ LL    T +Y  F+   G 
Sbjct: 359 LPLIQIVAAIPAPVYFPFLYAFSISFISHLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGV 418

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASW 529
           ++ P  F E+  ++ ++ W+  R IILP   PY +TG  +     W    ++E     + 
Sbjct: 419 TSMPVQFWEIMKNYELSFWQKLRQIILPSTMPYLITGITSTVNSTWGGLAIAEYWPNITQ 478

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            H     TGL   I   T +G         LI    V+  +      L     +  
Sbjct: 479 DHNLYVRTGLMKDIVLFTNQGEIALASWFSLIFAIVVVVYSILFTRKLMDLARKKY 534



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 3/180 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +L  +     T+ RV + I ++ I    +G        + +      ++  + P   F P
Sbjct: 4   ILETVIATLFTLGRVWITIALSIITGWFLGYLAIKSHVVENIYVSLIEIFESVPVFSFLP 63

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+    +    +L   L +  L+     W I   +       P D  EV+ ++  +   
Sbjct: 64  IVLIFFVFTIGGNLGIQLAVLFLVFTAVVWNIWMGIYQAYKTIPQDMLEVSENYRFSLMD 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   P   +    +   A     VSEV S G+   +  G+G+ I      G +
Sbjct: 124 KFSKLYIPYSMPRIASNLFPSFVNALFYITVSEVFSIGNSQYQVFGIGSLINYFVNNGLY 183


>gi|327311383|ref|YP_004338280.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus uzoniensis 768-20]
 gi|326947862|gb|AEA12968.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus uzoniensis 768-20]
          Length = 543

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 116/533 (21%), Positives = 219/533 (41%), Gaps = 27/533 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L+ +  S++  ++   +A KS+    V   ++ + +S+P+       V+ F    
Sbjct: 14  STARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFS-FFPVVLVFFVSG 72

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G  +GAELAA F +FT+ VWN+   +YQ+   +PR++ EV+ + RL    +  +L +P+
Sbjct: 73  IGGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSRMRHLYIPY 132

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--- 244
           SMP +  N+M S S G+F++  SE+  VG +   + GIGS IA    E +     +    
Sbjct: 133 SMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGNWGNPAFVHRY 192

Query: 245 --MLTMLGVIFLYDQLLFRPMIVW-SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
              L ML +        FR +  + + K+ ++ +  +           R      ++   
Sbjct: 193 LFALGMLALAVGSVIYGFRELANYVAGKYAIDSSMPVR----------RIRLIPPWLARG 242

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
                + ++     + R        + E        + +   + +    VV   AI +  
Sbjct: 243 VGGPLARIARITAAVQRRATREPVWYEEEKGHEHLFKVIGAAVGLAMLGVVIYGAISVIT 302

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            +   +           ++    +   RV  + +++  + + +G ++     +   + P 
Sbjct: 303 STPASLWRGL-LDQTGQILLALALDYGRVFAITLLSMALAVTLGYYLATHHEVERVVVPA 361

Query: 422 AQLLAAFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            Q+ AA+PA V+FPL+      V      +    L+  LL    T +Y+ ++   G  A 
Sbjct: 362 IQVFAAYPAPVYFPLIFAATYPVIYGVLGYYGNELYAILLGFISTFYYVFYSFWMGLKAM 421

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532
           P++  E+  + +++ W   R I+LP   PY V G  +    AW    + E       GH 
Sbjct: 422 PHEIWELMDNLNLSYWGRLRLILLPAAMPYLVAGISSTIDSAWGGLAIGEYWPGIYDGHD 481

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                GL   I  ST +G+        LI    V+    F    L     +  
Sbjct: 482 LAVGNGLMKLIVISTAEGNIALAAWASLIFGVVVVLFAIFFTRRLMDLAQKKY 534



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 3/179 (1%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L +     ++  RV+ LI  + +    +G          +       +  + P   FFP+
Sbjct: 5   LEIALATAVSTARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFSFFPV 64

Query: 437 VVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+         +L   L    L+     W I   +       P +  EVA +  +     
Sbjct: 65  VLVFFVSGIGGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSR 124

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            R++ +P   P      + +    +    VSEV S G       G+G+ IAE T +G++
Sbjct: 125 MRHLYIPYSMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGNW 183


>gi|119718931|ref|YP_919426.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
 gi|119524051|gb|ABL77423.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
          Length = 497

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 127/520 (24%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L    S +  RM  A ++SLL   V  +L A+++ +  +++P+LDI+QSIPILGF    
Sbjct: 3   ALLIAVSASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFPAA 62

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F+   P + +G E AA+F I TS VWNM F +Y S+ ++   + +++R + L    +
Sbjct: 63  LAMFIANLP-RALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVSR 121

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+Y+ VP S   L+ N ++S +GGWFF+ A+E+I +G+    L GIG++I  +    D  
Sbjct: 122 FFYIYVPASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGDYA 181

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
           +    +  +   I     LL+ P +                            +      
Sbjct: 182 SFYIGVAALFATIMATYVLLWNPAVK---------------------------SVRDLPL 214

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
            S   F+   S  V ++   LG       E  + + +  ++   +       +  VA+  
Sbjct: 215 PSVSAFYEKFSEVVSRVWSGLG-------EALVWVEARVKLPGFVPRVVGATLLVVALFY 267

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
               +  +++          +    +++ RV ++++ + ++ + +          +  I 
Sbjct: 268 LGSGVAGLLSLDVVGVAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTYSFRRAAMLIG 327

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPND 478
              +LLA+ PA +++PL+      +   P + L  +++ G+ WY+ FN++  G  +   +
Sbjct: 328 ASGELLASVPAIIWWPLLGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKE 387

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +E+A+ + + GW ++R I  P +FP  +TGA+++ GGAWNA+I +E  + G   +   G
Sbjct: 388 HEELAAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGG 447

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
           +GA +   T +G   +  L  L +   ++A+++ +W  L+
Sbjct: 448 VGALLNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLF 487



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +L ++     ++ R+    I++ +I + +G  +     + S + P   +L + P   FFP
Sbjct: 1   MLALLIAVSASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFP 60

Query: 436 LVVSCVSYY---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             ++         L        L++    W ++F V A   +      ++A  + +    
Sbjct: 61  AALAMFIANLPRALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVS 120

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            + YI +P      +  ++ +  G W     +EV + G    + TG+GA+I ES  +G +
Sbjct: 121 RFFYIYVPASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGDY 180

Query: 553 PEVVLGVLIMCCFVLALNRFLWHP 576
               +GV  +   ++A    LW+P
Sbjct: 181 ASFYIGVAALFATIMATYVLLWNP 204



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 10/226 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY----ATLAAKSRRLGMVLVPILDIMQS 109
           ++LDV  + +         L+ + I L+F+ V     A L    RR  M++    +++ S
Sbjct: 276 LSLDVVGVAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTYSFRRAAMLIGASGELLAS 335

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEV 168
           +P + +          +      G  +     +    +W + F++    L +I ++ EE+
Sbjct: 336 VPAIIWWPL----LGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKEHEEL 391

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +  + + GW  F  +  P   P L+   + S  G W   +A+E + +G   I L G+G+ 
Sbjct: 392 AAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGGVGAL 451

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-RPMIVWSNKFRLE 273
           +     E +      A L +  VI   D+ ++ R     S KF  E
Sbjct: 452 LNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLFSRLSGKFAGE 497


>gi|291295407|ref|YP_003506805.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290470366|gb|ADD27785.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 671

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 211/350 (60%), Gaps = 12/350 (3%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYAS 66
           P  +  R   + +DL+    V+ ++ +L   ++  T P       + ++L+   LP Y  
Sbjct: 8   PEVLRPRAPFSRWDLVVIPGVLVLLLLLTLALRGATAPYGPNTPDLTVSLNPAHLPYYGL 67

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           RT LRML+A+++SL FT VYAT+AAK  R   VL+P+LD +QS+PILGFLT T   F+ L
Sbjct: 68  RTLLRMLAALLLSLAFTLVYATIAAKVPRTERVLIPLLDFLQSLPILGFLTATTAIFLGL 127

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G + G E A+IFAIFTSQVWNMTFS Y SL  +PR+L+E +   RLS WQ+FW L VP
Sbjct: 128 FRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPRELQEAAAMLRLSPWQRFWKLEVP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           F +P LVWN MMS+SGGWFFVVASE+I V   D    LPG+G+YIALAI++ D  A+L+A
Sbjct: 188 FGLPNLVWNAMMSVSGGWFFVVASEVISVVGRDQDQYLPGVGAYIALAIQQADAQAMLWA 247

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
            LT+  ++ LYDQLLFRP++ W+ KF+ E++     A SWVL L ++  F + I      
Sbjct: 248 GLTLFLLVLLYDQLLFRPVVAWAEKFKFEQSESSDTAQSWVLTLLQRARFSQRIARLPQP 307

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
            +  L          L   R H P   L+     R+   L    F ++  
Sbjct: 308 LWEWLW---------LKSARGHRPGVALEPPPKPRLRSHLADLGFNLLIA 348



 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 110/238 (46%), Positives = 148/238 (62%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            V     +  A Q+         + +VL V  LG  T  RV   +++ ++IW+P+G+++G
Sbjct: 433 GVWAPANLAAACQAPLAPAGKVAWPEVLEVFKLGFFTALRVTFFVLLVTLIWLPIGVYVG 492

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP ++  +QP AQ  AAFPAN+ FPL V  ++++ LNP +W+S LM+ G QWYILFN I
Sbjct: 493 LRPRLTQWVQPLAQFGAAFPANLLFPLFVVAIAHFRLNPEIWVSPLMVLGGQWYILFNAI 552

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG++A PND KE A  + + GW  WR +ILP IFP +VTG ITA GG+WNASIV+EV  W
Sbjct: 553 AGSAAIPNDLKEAARLYGLRGWNRWRRLILPAIFPAFVTGGITATGGSWNASIVAEVVQW 612

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G   L  TGLGAYIA  +     P V LG+L+M  +VLA NR +W  LY       RL
Sbjct: 613 GDTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLAEERYRL 670



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 5/209 (2%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T LR+   +++  L             RL   + P+     + P           F+ 
Sbjct: 467 FFTALRVTFFVLLVTLIWLPIGVYVGLRPRLTQWVQPLAQFGAAFPANLLFPL----FVV 522

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 +  E+     +     W + F+       IP DL+E +R + L GW ++  L +
Sbjct: 523 AIAHFRLNPEIWVSPLMVLGGQWYILFNAIAGSAAIPNDLKEAARLYGLRGWNRWRRLIL 582

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P  V   + +  G W   + +E++  GDT +   G+G+YIA     +    +   M
Sbjct: 583 PAIFPAFVTGGITATGGSWNASIVAEVVQWGDTTLVATGLGAYIARWSTGEFNPHVGLGM 642

Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273
           L M   +  Y++L+++ +   +  ++RL+
Sbjct: 643 LVMGLWVLAYNRLIWQRLYQLAEERYRLD 671



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 6/178 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           P     + P    L + P   F      + +                 +     W + F+
Sbjct: 95  PRTERVLIPLLDFLQSLPILGFLTATTAIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFS 154

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             A     P + +E A+   ++ W+ +  + +P   P  V  A+ +  G W   + SEV 
Sbjct: 155 FYASLRTVPRELQEAAAMLRLSPWQRFWKLEVPFGLPNLVWNAMMSVSGGWFFVVASEVI 214

Query: 528 S--WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           S           G+GAYIA + ++     ++   L +   VL  ++ L+ P+  +  +
Sbjct: 215 SVVGRDQDQYLPGVGAYIALAIQQADAQAMLWAGLTLFLLVLLYDQLLFRPVVAWAEK 272


>gi|255513790|gb|EET90055.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 528

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 125/533 (23%), Positives = 224/533 (42%), Gaps = 21/533 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL    S + LRM +A+ IS++ +      AA+SR    V++PILDI Q++PIL F  F 
Sbjct: 9   SLIIDTSASWLRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFV 68

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +   +   PG +IG   A IF I TS VWN+TF +Y+S+  +P++  EV+  +R+    +
Sbjct: 69  IFVVVATLPG-MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDR 127

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P +MP +V   ++S S G F++V SE+   G+    +  GIG  I       + 
Sbjct: 128 LRRIFIPATMPRVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGNT 187

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            A   A+   +  +     L F P+    +++    +              +     + I
Sbjct: 188 EAYALALAVFIAFVIATRFLFFMPLERRYSRYMKSAS-------------KQGGAIAKMI 234

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
            ++    F+          +                   +      +   F     +A+ 
Sbjct: 235 TFAKRRIFTAQRRPGTGAPKPEKPRMQKSAAVRPVDKVPKEERLGRNYRAFYYAVALAVL 294

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            A  S  Y+            +    ++  RV  +  I   I +P+  ++ F     +  
Sbjct: 295 AAVLSYLYLYYPQLLGYEALALMSLVVSFTRVWGVFAIILAIALPLCAYLVFISKHQNTY 354

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
               Q++A+ PA +  P++V  +  Y L+  L   ++      WY++F++IA        
Sbjct: 355 LLVFQVVASIPATILLPVLVVALEGYPLHSELVAIVVYFLSGIWYVIFSIIASTRTLSPS 414

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS------WGHI 532
             EV   F I G   +R I L  + P  +TGA+T     WNASIV+E  +         I
Sbjct: 415 VLEVKKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGAVI 474

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
               TG+G  +  S   G+   +++ +L +   ++ +N+F+W   Y    +  
Sbjct: 475 TAVHTGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWKRFYKKIEKVY 527



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 8/214 (3%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++ +I     +  R+   + I+ I+ I VGIW          I P   +    P   FFP
Sbjct: 7   LVSLIIDTSASWLRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFP 66

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+  V       +  N  +  L++    W I F V     A P +F EVAS + +    
Sbjct: 67  FVIFVVVATLPGMIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLD 126

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH-IHLRTTGLGAYIAESTEKGS 551
             R I +P   P  V  ++ +        + SE+ S G+  +    G+G  I +    G+
Sbjct: 127 RLRRIFIPATMPRVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGN 186

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                L + +   FV+A     + PL     R  
Sbjct: 187 TEAYALALAVFIAFVIATRFLFFMPL----ERRY 216


>gi|312797024|ref|YP_004029946.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454]
 gi|312168799|emb|CBW75802.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 212

 Score =  229 bits (583), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 117/195 (60%), Positives = 148/195 (75%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            I IAS++W+P+G+ IG RP ++ K+QP AQ LAAFPAN+ FP+ V  +  + LNP++WL
Sbjct: 17  AIAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFGLNPDIWL 76

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S L++ GTQWYILFNVIAGASA+PNDFKE A++F I GW+WWR ++LPGIFPYYVTGAIT
Sbjct: 77  SPLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAIT 136

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A GGAWNASIVSE   WG  H+   GLGAYIA+ T  G +P+++LG+ +M  FV   NR 
Sbjct: 137 ASGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRL 196

Query: 573 LWHPLYLYGTRCLRL 587
           LW P+Y Y    LRL
Sbjct: 197 LWRPMYAYAENKLRL 211



 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 4/194 (2%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ I+ +       L      L   L P+   + + P        V+  +       +  
Sbjct: 17  AIAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFG----LNP 72

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ++     I     W + F++       P D +E + +FR+ GWQ +  + +P   P  V 
Sbjct: 73  DIWLSPLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVT 132

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             + +  G W   + SE +  GDT +   G+G+YIA      D   I+  +  M   + L
Sbjct: 133 GAITASGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTL 192

Query: 255 YDQLLFRPMIVWSN 268
           +++LL+RPM  ++ 
Sbjct: 193 FNRLLWRPMYAYAE 206


>gi|167718236|ref|ZP_02401472.1| putative transmembrane transporter [Burkholderia pseudomallei DM98]
          Length = 277

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 123/257 (47%), Positives = 161/257 (62%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            L          +  + W  +    A+      +       ++ D+  V   G +T+ RV
Sbjct: 20  RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 79

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +
Sbjct: 80  LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 139

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGA
Sbjct: 140 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 199

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+N
Sbjct: 200 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 259

Query: 571 RFLWHPLYLYGTRCLRL 587
           R +W PLY +  R  RL
Sbjct: 260 RLIWRPLYAFAERRSRL 276



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84
           +  +  + L           ++      L    L   A   + T  R+L  + ++ +   
Sbjct: 32  IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 91

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L     R   ++ P+   + + P        V   +       +   +     +  
Sbjct: 92  PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 147

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W
Sbjct: 148 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 207

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
              + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+ 
Sbjct: 208 NASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLY 267

Query: 265 VWSNK 269
            ++ +
Sbjct: 268 AFAER 272


>gi|167909681|ref|ZP_02496772.1| putative transmembrane transporter [Burkholderia pseudomallei 112]
          Length = 266

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 123/257 (47%), Positives = 161/257 (62%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            L          +  + W  +    A+      +       ++ D+  V   G +T+ RV
Sbjct: 9   RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +
Sbjct: 69  LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 128

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGA
Sbjct: 129 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 188

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+N
Sbjct: 189 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMN 248

Query: 571 RFLWHPLYLYGTRCLRL 587
           R +W PLY +  R  RL
Sbjct: 249 RLIWRPLYAFAERRSRL 265



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84
           +  +  + L           ++      L    L   A   + T  R+L  + ++ +   
Sbjct: 21  IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 80

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L     R   ++ P+   + + P        V   +       +   +     +  
Sbjct: 81  PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 136

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W
Sbjct: 137 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 196

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
              + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+ 
Sbjct: 197 NASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLY 256

Query: 265 VWSNK 269
            ++ +
Sbjct: 257 AFAER 261


>gi|167917693|ref|ZP_02504784.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 257

 Score =  223 bits (569), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 122/256 (47%), Positives = 160/256 (62%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +          +  + W       A+      +       ++ D+  V   G +T+ RV+
Sbjct: 1   MSTRGRAWAGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVL 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +W
Sbjct: 61  VLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIW 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAI
Sbjct: 121 LSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAI 180

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR
Sbjct: 181 TASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNR 240

Query: 572 FLWHPLYLYGTRCLRL 587
            +W PLY +  R  RL
Sbjct: 241 LIWRPLYAFAERRSRL 256



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 90/245 (36%), Gaps = 7/245 (2%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84
           +  +  +             ++      L    L   A   + T  R+L  + ++ +   
Sbjct: 12  IARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 71

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L     R   ++ P+   + + P        V   +       +   +     +  
Sbjct: 72  PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LVPAIWLSPLMIL 127

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W
Sbjct: 128 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 187

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
              + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+ 
Sbjct: 188 NASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLY 247

Query: 265 VWSNK 269
            ++ +
Sbjct: 248 AFAER 252


>gi|167737268|ref|ZP_02410042.1| putative transmembrane transporter [Burkholderia pseudomallei 14]
          Length = 261

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 123/257 (47%), Positives = 161/257 (62%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            L          +  + W  +    A+      +       ++ D+  V   G +T+ RV
Sbjct: 4   RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 63

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +VLI +A+++W+P G+ IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +
Sbjct: 64  LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 123

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           WLS LMI GTQWYILFNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGA
Sbjct: 124 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 183

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ITA GGAWNASIVSE+  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+N
Sbjct: 184 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMN 243

Query: 571 RFLWHPLYLYGTRCLRL 587
           R +W PLY +  R  RL
Sbjct: 244 RLIWRPLYAFAERRSRL 260



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84
           +  +  + L           ++      L    L   A   + T  R+L  + ++ +   
Sbjct: 16  IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 75

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L     R   ++ P+   + + P        V   +       +   +     +  
Sbjct: 76  PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 131

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W
Sbjct: 132 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 191

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
              + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+ 
Sbjct: 192 NASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLY 251

Query: 265 VWSNK 269
            ++ +
Sbjct: 252 AFAER 256


>gi|167844449|ref|ZP_02469957.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 243

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 122/242 (50%), Positives = 159/242 (65%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W  +    A+      +       ++ D+  V   G +T+ RV+VLI +A+++W+P G
Sbjct: 1   VAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAG 60

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG RP  ++ +QP AQ LAAFPAN+ FPL V  +  + L P +WLS LMI GTQWYIL
Sbjct: 61  VLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYIL 120

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           FNVIAGASAFP+D KE A+S  +    WWR ++LPGI PYYVTGAITA GGAWNASIVSE
Sbjct: 121 FNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSE 180

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +  WGH  L   GLGAY+A +T  GS+P + LGV  M   V+A+NR +W PLY +  R  
Sbjct: 181 LVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRS 240

Query: 586 RL 587
           RL
Sbjct: 241 RL 242



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 7/242 (2%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTFVYA 87
           +  + L           ++      L    L   A   + T  R+L  + ++ +      
Sbjct: 1   VAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAG 60

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L     R   ++ P+   + + P        V   +       +   +     +     
Sbjct: 61  VLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LVPAIWLSPLMILGTQ 116

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W + F++       P DL+E + S R+     +  + +P  +P  V   + +  G W   
Sbjct: 117 WYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNAS 176

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + SE++V G T +   G+G+Y+A A        I   + TM  ++   ++L++RP+  ++
Sbjct: 177 IVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFA 236

Query: 268 NK 269
            +
Sbjct: 237 ER 238


>gi|18312383|ref|NP_559050.1| sulfonate transport permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
 gi|18159835|gb|AAL63232.1| sulfonate transport permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
          Length = 453

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 133/519 (25%), Positives = 228/519 (43%), Gaps = 73/519 (14%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  RM  A++I++   +  A    KSRR+   ++P+LD++QS+PILGF    +  F+
Sbjct: 6   LLATFGRMAIALLITIAVAYAVAYAMHKSRRVESFVLPVLDVLQSVPILGFFPIALYVFI 65

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P  V+GAELAAIF IFTS  WN+ FS+YQS   +P +  +++R + L+   +  ++ 
Sbjct: 66  YLFP--VVGAELAAIFLIFTSMAWNIIFSVYQSFKTMPSEYVDMARIY-LNERLELAHVY 122

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++ G+ +N+ +S +  +FF+ ASE+I +G T I L GIGS +  A    D       
Sbjct: 123 IPAALRGIYYNIPVSWANAFFFITASEVITLG-TEIRLFGIGSLVVEAFNAGDYATAYIG 181

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +        L    L+R +                P +S    L   + +L++ G+    
Sbjct: 182 IAAGALANSLLYLTLWRKLTR----------EVPQPPNSLAESL---SAWLKY-GWYVVV 227

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             + L                     FL+  +    +    +     V  ++      ++
Sbjct: 228 ALTALFITAVGYYVAKAPPSLPQLGEFLRGAAESAEALPPSLLRVVAVLAISGAAGLAAL 287

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V    ++                               I +G              L
Sbjct: 288 YSVVKKPGWE-----------------------------TAILLGTS------------L 306

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L++ PA   +PL+ + V        L   LL++ G   Y + N IA     P D    A 
Sbjct: 307 LSSIPAVFLYPLLGAVV-----KGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---AR 358

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++ I G  ++ +I++P   PY +TG +T  GGAWNA+IV+E  +         GLG Y+A
Sbjct: 359 AYQIGGAAYFLHILVPASLPYLITGMLTTWGGAWNAAIVAEPLA------SVHGLGRYMA 412

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           ++ + G  P ++  V+ M   V+A+N+F+W  LY    +
Sbjct: 413 DAADAGDMPRLLASVITMTALVVAVNKFVWKRLYEEAAK 451



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 100/247 (40%), Gaps = 18/247 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            V+ +  + I   G      P  +  +           +    + LR+++ + IS     
Sbjct: 225 VVVALTALFITAVGYYVAKAPPSLPQLGEFLRGAAESAEALPPSLLRVVAVLAISGAAGL 284

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                  K       ++    ++ SIP +               G V+  EL AI  +  
Sbjct: 285 AALYSVVKKPGWETAILLGTSLLSSIPAVFLYPLL---------GAVVKGELLAILLLMP 335

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +     +   +  ++P+DL   +R++++ G   F ++ VP S+P L+  M+ +  G W
Sbjct: 336 GALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHILVPASLPYLITGMLTTWGGAW 392

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
              + +E +        + G+G Y+A A    D+  +L +++TM  ++   ++ +++ + 
Sbjct: 393 NAAIVAEPLA------SVHGLGRYMADAADAGDMPRLLASVITMTALVVAVNKFVWKRLY 446

Query: 265 VWSNKFR 271
             + K+R
Sbjct: 447 EEAAKWR 453


>gi|218884510|ref|YP_002428892.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
 gi|218766126|gb|ACL11525.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
          Length = 497

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 130/527 (24%), Positives = 233/527 (44%), Gaps = 37/527 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  RM +A ++SLL         A++R +  VL+PILD++QSIPILGF    
Sbjct: 4   ELVVATLLSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVV 63

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F+    G  +G EL+AI  I TS VWNM F +Y S+ ++    + ++  +R+    K
Sbjct: 64  LSAFVYGL-GPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLK 122

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + VP S   L+ N ++S + GWFF+ ++E+I +G   + L G+GS+I  A    D  
Sbjct: 123 LALVYVPASRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQ 182

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
           A    M  +  VI     +L+ P +V     +    T +    +    L R T       
Sbjct: 183 AFAAGMGVLFTVILATYIILWNPAVV-----KYTGLTILPGVMAVFNALERLTRLF---- 233

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
                                 ++R       L L S+  +  +  +       G + G+
Sbjct: 234 ---------------WRLVVKAILRAWLYSRRLVLPSSTALVLVALLGPQIRPTGFSTGL 278

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            + S+   +N F       ++ +  + +  +++ + +A             R  +     
Sbjct: 279 LYGSLVKYLNMFLTNVWPTLLRVYVVLLVSLLISLPLA--------YLSHRRRAVGLAAC 330

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPND 478
              +LL++ PA +++PL++      H  P   +  + + G  WY+ FNV I G      D
Sbjct: 331 TAGELLSSIPAMIWWPLLLPVA---HAAPWFVMFFVYLQGALWYVYFNVMIFGLQYVKRD 387

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+   + I G+ +++ + +P + P  +TG ++A GGAWNASI +E  ++G   +   G
Sbjct: 388 IIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWNASIAAEYIAFGDFEVDIGG 447

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +G+ I +   +G    V+   L M   ++ LN+ +W  L+       
Sbjct: 448 VGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLIWGRLFARLGARF 494



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 3/204 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V  ++    ++++R+    +++ +I +  GI +     + + + P   +L + P   FFP
Sbjct: 2   VPELVVATLLSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFP 61

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGT---QWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+S   Y            ++  +    W ++F V A   +    F  +AS + I    
Sbjct: 62  VVLSAFVYGLGPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPL 121

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P      ++ ++ +    W     +EV S G   L+  GLG++I +++ +G  
Sbjct: 122 KLALVYVPASRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDA 181

Query: 553 PEVVLGVLIMCCFVLALNRFLWHP 576
                G+ ++   +LA    LW+P
Sbjct: 182 QAFAAGMGVLFTVILATYIILWNP 205


>gi|171184672|ref|YP_001793591.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus neutrophilus V24Sta]
 gi|170933884|gb|ACB39145.1| binding-protein-dependent transport systems inner membrane
           component [Thermoproteus neutrophilus V24Sta]
          Length = 458

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/516 (24%), Positives = 221/516 (42%), Gaps = 75/516 (14%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  RM  A+V ++   +  A    +SRR+  V++P+LD+MQS+P+LGF    +  F+   
Sbjct: 15  TFGRMALALVFTVAVAYALAYAMWRSRRVEAVMLPVLDVMQSVPVLGFFPIALYIFVYFV 74

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P   IGAELAA F IFTS  WNM F +YQ+   +PR+L ++SR + L+   +  ++ +P 
Sbjct: 75  PW--IGAELAAQFLIFTSMAWNMIFGIYQAFKTLPRELLDMSRVY-LNERLELAHVFLPA 131

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  + +N  +S +  +FF+ ASE+I +G T + L GIGS++  A +  D  A    +  
Sbjct: 132 ALRSVYYNAAVSWANAFFFITASEVITLG-TEVKLFGIGSFVVDAFERGDTTAAYVGIAV 190

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
            +        LL+R ++             +    S +  +     F  +I + S   F+
Sbjct: 191 GVAGNVALYFLLWRRLMR-----------DVPQPPSALAEI-----FTPWIKHGSHAVFA 234

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
             +  +                  L+  +    S            G++  +   ++  +
Sbjct: 235 SAALLLAAALYYAMRSPPPPATGLLEGFAQSLASVAPTSARVLAALGISAAVGIAAVALV 294

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V                                           P   + I      L++
Sbjct: 295 VRK-----------------------------------------PEAETPILLALSALSS 313

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA   +PL+ S               L++ G+  Y   N +A     P DF +    + 
Sbjct: 314 VPAVFLYPLIGSVA-----RGEALAVALLLPGSIVYTALNAVAAWRDVPRDFVKA---YG 365

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G  ++ +++LP   PY VTG +TA GGAWNA+IV+E  +         GLGAY+ ++ 
Sbjct: 366 VRGAVYYVHVLLPAALPYLVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAA 419

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           + G+ P +   V +M   V+ +N+ +W  LY   ++
Sbjct: 420 QAGNTPALAASVAVMSAVVIVVNKLVWRRLYNLASQ 455



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 87/203 (42%), Gaps = 18/203 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T+ R+L+A+ IS         L  +       ++  L  + S+P +              
Sbjct: 272 TSARVLAALGISAAVGIAAVALVVRKPEAETPILLALSALSSVPAVFLYPLI-------- 323

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V   E  A+  +    +     +   +  ++PRD     +++ + G   + ++ +P 
Sbjct: 324 -GSVARGEALAVALLLPGSIVYTALNAVAAWRDVPRDFV---KAYGVRGAVYYVHVLLPA 379

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P LV  ++ +  G W   + +E +        + G+G+Y+  A +  +  A+  ++  
Sbjct: 380 ALPYLVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAAQAGNTPALAASVAV 433

Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270
           M  V+ + ++L++R +   ++++
Sbjct: 434 MSAVVIVVNKLVWRRLYNLASQW 456


>gi|119872760|ref|YP_930767.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
 gi|119674168|gb|ABL88424.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
          Length = 459

 Score =  211 bits (538), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 131/519 (25%), Positives = 234/519 (45%), Gaps = 73/519 (14%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  RM  A++ ++   +  A    KSRR+  VL+P+LD++QS+PILGF    +  F+
Sbjct: 11  LLATFGRMALALLSTVAIAYALAYAMYKSRRVEAVLLPLLDVLQSVPILGFFPIALYVFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            + P   IGAELAA F IFTS  WN+ F +YQS   +PR+L E+S+ + L+      ++ 
Sbjct: 71  FIMP--QIGAELAAQFLIFTSMAWNIIFGIYQSFKTLPRELIEMSQVY-LTERLALAHVF 127

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  + +N  +S S  +FF+ ASE+I +G T + L GIGS++  A ++ D  A    
Sbjct: 128 LPVALRSVYYNAAVSWSNAFFFITASEVITLG-TEVKLFGIGSFVVDAFEKGDTTAAYVG 186

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +             L+R +I                     +     + ++++  Y  + 
Sbjct: 187 IAIGTAGNIALYLFLWRRLIR-------------EMPQPPYVLSKILSVWMKYGIYVIFT 233

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
               LS                                     ++ +         W+ +
Sbjct: 234 ATMLLSAVS---------------------------------IYYILRNFTPASQQWELL 260

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+VN            +  +T+  +  L+ +A ++           P + + +     +
Sbjct: 261 SYLVNSLIDVLPTLARVVMTLTISALAGLLSVALVV---------KNPQLETTVFIALSI 311

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L++ PA   +PL+ S V    L+       L++ G+  Y + N +A     P D    A 
Sbjct: 312 LSSIPAVFLYPLIGSVVRGEALS-----VALLLPGSIVYTVLNAVAAWRDVPKDL---AR 363

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++ I G  ++ +I++P   PY +TG +TA GGAWNA+IV+E  +         GLGAY+A
Sbjct: 364 AYGIGGAVYFIHILIPATLPYLITGLLTAWGGAWNATIVAESLA------NVNGLGAYMA 417

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +  + G+ P +++ V++M   V+ +N+ +W  LY    +
Sbjct: 418 QVAQLGNIPALIISVIVMSGVVITVNKLVWKRLYNLVAQ 456


>gi|88062879|gb|ABD39044.1| binding protein dependent transporter [Mesorhizobium loti]
          Length = 194

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 124/173 (71%), Positives = 154/173 (89%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R  +V++P+LDI+QS+PILGFLTFTVV+FMNL+PG+V+GAELA++FAIFTSQ WNMTFS+
Sbjct: 16  RAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAIFTSQAWNMTFSL 75

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           YQS+ N+P+DLEE ++SF LSGWQ+FW L VPF+MPGL+WN MMSMSGGWFFVVASE I 
Sbjct: 76  YQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAIT 135

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           VG+T + LPGIGSY+A+AI++QDL AILYAML ML VI  YDQLLFRP++ W+
Sbjct: 136 VGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRPIVAWA 188



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 4/175 (2%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNV 468
                + P   +L + P   F    V           L   L     +     W + F++
Sbjct: 16  RAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAIFTSQAWNMTFSL 75

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                  P D +E   SFH++GW+ +  + +P   P  +  A+ +  G W   + SE  +
Sbjct: 76  YQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAIT 135

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            G+  +   G+G+Y+A + ++   P ++  +L M   ++A ++ L+ P+  +   
Sbjct: 136 VGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRPIVAWAAE 190


>gi|320101553|ref|YP_004177145.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
 gi|319753905|gb|ADV65663.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
          Length = 497

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 118/517 (22%), Positives = 223/517 (43%), Gaps = 44/517 (8%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            RM++A  +S L         A+ R +  VL+P+LDI+QSIP+LGF        + L P 
Sbjct: 16  GRMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGFFPVVFTLLLML-PA 74

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           + +  E AA+F + T  +WNM F +Y ++ ++  D+  ++  + L  + +  Y+ VP + 
Sbjct: 75  RQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAFSRLAYIYVPSAR 134

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             L  N ++S +GGWFF+ + E+I  G     L G+GS I     E D      A+L + 
Sbjct: 135 AALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGDTWGFYTAILLLF 194

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            +I     L+F P +                           T   R +  +S   F  +
Sbjct: 195 LMIVSSYLLVFNPAV--------------------------NTVTRRLMLPASGIIFPYI 228

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +         L  +        +                  +   + +     +    ++
Sbjct: 229 ARLASATWGLLLSLGMRLEARRVATRRWMHRGPAAAGVAVALPTVLLLSHGSLANPLFIS 288

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F        +    I++ RV  + +++ +  + +             I    ++L + P
Sbjct: 289 SF--------LSNFLISLARVSAITLLSLVASVALAYL-ALTRQWGVGIAFIGEVLGSIP 339

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVI-AGASAFPNDFKEVASSF 486
           A +++PL+         +P  WL  L++F  G+ WY  FN++  G      +  E+A  +
Sbjct: 340 AIIWWPLLSPLA-----SPLPWLVSLVVFLQGSFWYEFFNIMLFGVPEVREELMELARVY 394

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + G+ ++RYI+LP + P   +GA++A GGAWN++IV+E  S G + +   G+G+ +A  
Sbjct: 395 GVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILTVDLGGVGSTLARY 454

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              G+     L +L+    ++ L++ LW  ++    +
Sbjct: 455 VYSGNLEAASLTILLWAVMIVVLDKILWSRIFKLVEK 491



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 3/216 (1%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+  ++     ++ R++    +++++ I +G+ +  R  +   + P   +L + P   FF
Sbjct: 3   DIALLLLASLASLGRMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGFF 62

Query: 435 PLV---VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+V   +  +    +        L+  G  W ++F V +   +   D   +A  + +  +
Sbjct: 63  PVVFTLLLMLPARQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAF 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               YI +P         +I +  G W      EV + G    R  GLG+ I     +G 
Sbjct: 123 SRLAYIYVPSARAALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGD 182

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                  +L++   +++    +++P     TR L L
Sbjct: 183 TWGFYTAILLLFLMIVSSYLLVFNPAVNTVTRRLML 218


>gi|145590546|ref|YP_001152548.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum arsenaticum DSM 13514]
 gi|145282314|gb|ABP49896.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum arsenaticum DSM 13514]
          Length = 468

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 128/519 (24%), Positives = 224/519 (43%), Gaps = 73/519 (14%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  RM  A+++++   +       +SRR+   ++P+LD++QS+PILGF    + +F+
Sbjct: 21  LLATFGRMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFPLALYFFI 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P    GAELAAIF IFTS  WN+ FS+YQS   +PR+L ++SR + L+      ++ 
Sbjct: 81  ALLPAA--GAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLALAHVF 137

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++ G+ +N+ +S +  +FF+ ASE+I +G T I L GIGS +     E D+ + L  
Sbjct: 138 IPAALRGVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDVSSALVG 196

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +   +    +    L+R ++                             +L++ GY    
Sbjct: 197 IAVGIAANVVLYLTLWRRLM-------------SQVPQPPDKLAEAAGPWLKYGGYFLAA 243

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F              LG + +    +   + +  R+              +   +A  +I
Sbjct: 244 F----------AIILLGFVLYTALGSTNAVLAISRLPGSFVEALAAAPFTLVRVLATLAI 293

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V   T   V+    L                   + +G+ +                
Sbjct: 294 SALVALLTLHAVVRAPRLEA----------------GVLLGVLL---------------- 321

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +++ PA   +PL+ + V    L+       L++ G   Y + N +A     P D  +   
Sbjct: 322 ISSVPAVFLYPLLGALVRGEALSVT-----LLLPGAVVYTVLNAVAAWRDVPQDLVKA-- 374

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + I G  +   +++P   PY +TG +TA GGAWNASIV+E  +         GLG    
Sbjct: 375 -YQIRGRLYLTQVLIPASMPYLITGLLTAWGGAWNASIVAEPLA------NVHGLGGLTT 427

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           ++ ++G    +V  V  M   V+A+NR +W  LY    +
Sbjct: 428 QAADRGDISLLVATVATMTLIVVAVNRVVWRRLYEEAAK 466



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 4/205 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V+  +     T  R+ V +++   +   +G  +     + + + P   +L + P   FFP
Sbjct: 14  VILSLLALLATFGRMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFP 73

Query: 436 LVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           L +             L    L+     W I+F+V       P +  +++  + +     
Sbjct: 74  LALYFFIALLPAAGAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLA 132

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             ++ +P            +   A+     SEV + G   ++  G+G+ + +  ++G   
Sbjct: 133 LAHVFIPAALRGVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDVS 191

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLY 578
             ++G+ +     + L   LW  L 
Sbjct: 192 SALVGIAVGIAANVVLYLTLWRRLM 216



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 101/246 (41%), Gaps = 21/246 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFV 85
           +    I+L G    T       ++ I+    S  +  +    T +R+L+ + IS L   +
Sbjct: 241 LAAFAIILLGFVLYTALGSTNAVLAISRLPGSFVEALAAAPFTLVRVLATLAISALVALL 300

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                 ++ RL   ++  + ++ S+P +               G ++  E  ++  +   
Sbjct: 301 TLHAVVRAPRLEAGVLLGVLLISSVPAVFLYPLL---------GALVRGEALSVTLLLPG 351

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V     +   +  ++P+DL    +++++ G      + +P SMP L+  ++ +  G W 
Sbjct: 352 AVVYTVLNAVAAWRDVPQDLV---KAYQIRGRLYLTQVLIPASMPYLITGLLTAWGGAWN 408

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             + +E +        + G+G     A    D+  ++  + TM  ++   +++++R +  
Sbjct: 409 ASIVAEPLA------NVHGLGGLTTQAADRGDISLLVATVATMTLIVVAVNRVVWRRLYE 462

Query: 266 WSNKFR 271
            + K+R
Sbjct: 463 EAAKWR 468


>gi|126459292|ref|YP_001055570.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum calidifontis JCM 11548]
 gi|126249013|gb|ABO08104.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum calidifontis JCM 11548]
          Length = 453

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 125/506 (24%), Positives = 216/506 (42%), Gaps = 78/506 (15%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  RM   +V+S+   +      AKSRR   VL+P LD+MQS+PILGF    +  F+
Sbjct: 11  LLATYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALFVFV 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           + +P   IGAELAA+F IFTS  WN+ F +YQ+L  +PR+  E++R + L+   +  ++ 
Sbjct: 71  SFFP--RIGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHVV 127

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PF++  L +N  +S +  +FF+ ASE+I +G T I L GIGS +  A ++ DL      
Sbjct: 128 IPFTLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYVG 186

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +   L        L++R ++                           T   +      W 
Sbjct: 187 IAVALLGNVALYALVWRRVL---------------------------TRLPQLPFVDLWR 219

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            +      V                                I     +    +  A  S 
Sbjct: 220 VWMKYGAYV----------------------------VYAAILLLAYLFAEYVATAPLSA 251

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G           L +  L  +     + +I+I++ + +     +  +P     + P   +
Sbjct: 252 GGFAAAVAESTYLSLFSLARV-----LAVILISAAVGLATTALVVEKPSREVAVFPAVAV 306

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L++ P    +PL+ + +        + + +L++     Y + N +A     P D    A 
Sbjct: 307 LSSIPPVFLYPLLAAFI-----KGEILVLVLLLPAAALYTVINTLAAWRDVPRDL---AK 358

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++ I+GW +  +I++P   PY  TG +T  GGAWN  +V+E  +        +GLG+Y+A
Sbjct: 359 AYQISGWLYLWHILIPAALPYIATGLLTTWGGAWNGLVVAEPFA------DVSGLGSYMA 412

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            +  +G    +   V +M   V+A N
Sbjct: 413 HAAGRGDVNALFASVAVMTAIVVATN 438



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 95/238 (39%), Gaps = 19/238 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++      +V   I +L +   E  V    +        V      +  +  R+L+ ++I
Sbjct: 220 VWMKYGAYVVYAAILLLAYLFAEY-VATAPLSAGGFAAAVAESTYLSLFSLARVLAVILI 278

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S         L  +     + + P + ++ SIP +        +         I  E+  
Sbjct: 279 SAAVGLATTALVVEKPSREVAVFPAVAVLSSIPPVFLYPLLAAF---------IKGEILV 329

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  +  +       +   +  ++PRDL   ++++++SGW   W++ +P ++P +   ++ 
Sbjct: 330 LVLLLPAAALYTVINTLAAWRDVPRDL---AKAYQISGWLYLWHILIPAALPYIATGLLT 386

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           +  G W  +V +E          + G+GSY+A A    D+ A+  ++  M  ++   +
Sbjct: 387 TWGGAWNGLVVAEPFA------DVSGLGSYMAHAAGRGDVNALFASVAVMTAIVVATN 438



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 76/199 (38%), Gaps = 4/199 (2%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T  R+ + ++++  +   +G  +       + + PF  ++ + P   FFP+ + 
Sbjct: 8   FLALLATYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALF 67

Query: 440 CVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +   +   L    L+     W I+F V       P ++ E+A  + +       ++
Sbjct: 68  VFVSFFPRIGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHV 126

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P         A  +   A+     SEV + G   +   G+G+ + ++ E G      +
Sbjct: 127 VIPFTLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYV 185

Query: 558 GVLIMCCFVLALNRFLWHP 576
           G+ +     +AL   +W  
Sbjct: 186 GIAVALLGNVALYALVWRR 204


>gi|58040918|ref|YP_192882.1| transport protein [Gluconobacter oxydans 621H]
 gi|58003332|gb|AAW62226.1| Transport protein [Gluconobacter oxydans 621H]
          Length = 547

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 118/566 (20%), Positives = 230/566 (40%), Gaps = 42/566 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++       L  +   +V   +  + P       L   A  T L ++ +++I +  
Sbjct: 23  IELSILFCATAFALLVLPRASVAPVLSAMPPAA--PLPLWDMAGLTVLHVILSLLIVVAA 80

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           + + +  A +  R    L+P L + +++P LG +      F            L  +   
Sbjct: 81  SLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAALF---------PPTLTIMLVA 131

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            +S +W +  ++  +   +P  L+EV+   R++GWQ+FW L +P ++P   +  M +M  
Sbjct: 132 ASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWRLQMPVAVPLTTFRAMQTMPA 191

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  ++++E +++  +     G G+    A+ +   L I+     +L +I + DQ L RP
Sbjct: 192 FWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIVEVSGIILLLILVIDQALMRP 251

Query: 263 MIVWSNKFRLERT-TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321
           M+ W+ ++R E          SW+L ++R+T  + ++     +    + N        LG
Sbjct: 252 MVGWAQRYRPEGPFEERARPQSWLLTIWRRTKLMLWLSGGVSDALVWIGNW------RLG 305

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R   PE         R    L      VV    +  A    G +        V   + 
Sbjct: 306 RPRSILPERH-------RTVRELPEALLPVVSLFLLVYAVYHAGLL------GQVPADLA 352

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+  V   +++  ++W+P+G+ I         +        A  A   FP V+   
Sbjct: 353 ESVLTLSHVCGTLLLCVLVWVPLGLVISEHGSSLRNVCRM-----AVMACGLFPAVLLYP 407

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               L  +  + LL   G  W +   V+  A A P+  ++VA+   + G   WR ++LP 
Sbjct: 408 LCRELGLDSPVILL-FLGAHWLVGIVVLDAAKAIPSGLRQVAAGLRLRGVLLWRRLLLPA 466

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I P    G +TA    WNA +V+E           +GLGA +      G+    +L +++
Sbjct: 467 IAPELCGGLLTAVVPVWNAVMVAEAFVPSD-----SGLGAALLSEALSGAVAAQILALML 521

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587
           +    + L+R +  PL +   +   +
Sbjct: 522 LTLLSMLLDRLVLQPLAVNAAQKYTI 547



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 5/249 (2%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
              QR+S +     FC      + +   S+  +++       L +  +  +T+  V++ +
Sbjct: 15  RWRQRMSGIELSILFCATAFALLVLPRASVAPVLSAMPPAAPLPLWDMAGLTVLHVILSL 74

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I     + +       P   + + P   +  A P      ++ +        P L + L
Sbjct: 75  LIVVAASLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAALF-----PPTLTIML 129

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +      W I+  V+      P    EVA+   +TGW+ +  + +P   P     A+   
Sbjct: 130 VAASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWRLQMPVAVPLTTFRAMQTM 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
              W   + +E       H  T G GA   ++        +V    I+   +L +++ L 
Sbjct: 190 PAFWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIVEVSGIILLLILVIDQALM 249

Query: 575 HPLYLYGTR 583
            P+  +  R
Sbjct: 250 RPMVGWAQR 258


>gi|325519249|gb|EGC98700.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 187

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 105/170 (61%), Positives = 133/170 (78%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I + + G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 18  RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G
Sbjct: 78  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           AELAAIFAIFTSQ WNMTFS YQSL  +PRDL+EVSR F L+ WQ+FW L
Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 187



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 10/185 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376
           + F  P       + + +    D   F ++  +              IG +       D 
Sbjct: 3   VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R++  ++ +    +  G            + P   +L + P   F   
Sbjct: 63  SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122

Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+          L   L     +     W + F+        P D  EV+  FH+T W+
Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182

Query: 493 WWRYI 497
            +  +
Sbjct: 183 RFWKL 187


>gi|224456410|ref|ZP_03664883.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. tularensis MA00-2987]
          Length = 245

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 4/240 (1%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W+ V+    +        +    F   D+ Y+I L   T  RV + ++I+  I  P+GI
Sbjct: 8   AWYIVIISACVWAGNALWHF----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGI 63

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           WIG     +  IQP  Q+ AA P  +FFP+V   +     + N+W   L++ GT +Y+LF
Sbjct: 64  WIGMSSKRTKAIQPIIQIGAAIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSYYVLF 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NVI+G S  P +  E+  SFH+ G +WW    +P +FPY V G I+A GGAWN++I +E+
Sbjct: 124 NVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAEL 183

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             WG   ++  G+GA ++ +T      +  L V+ +C  V     F+W PLY       +
Sbjct: 184 VIWGSNTIKVDGIGALVSTTTANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 243



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 4/212 (1%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+  L      TT+R+  AM+IS+            S +    + PI+ I  +IP   F 
Sbjct: 32  DMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIFF 91

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               V  +           +  I  I T   + + F++     N+P ++ E+++SF L G
Sbjct: 92  PIVAVLILAGDGS----LNVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKG 147

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + ++   +P   P +V  ++ +  G W   +A+E+++ G   I + GIG+ ++      
Sbjct: 148 LKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 207

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
            L     A++ +  ++ L    +++P+   + 
Sbjct: 208 QLHDAALAVVALCSLVALCIIFIWKPLYKLAE 239


>gi|227328482|ref|ZP_03832506.1| putative sulfate ester transporter, permease component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 568

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 93/552 (16%), Positives = 180/552 (32%), Gaps = 77/552 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA + +  I         +     DIV    + L  + L      +  R+ S ++  +L 
Sbjct: 72  LALLALWYISTHYGWMPAQILPAPDIVAKTAVELWHNDLLPQLFISLQRLASGLLAGVLA 131

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L   SRR   +L P +  +  IP LG++   +V F      K+          I
Sbjct: 132 GTLLGALMGTSRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 183

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  MT      + N P  L+EV+R+ RL   Q+   L +P ++P  +  + +++S 
Sbjct: 184 IKAVIIPMTLHTQTGVRNAPHALQEVARTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 243

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
            W  ++  E++          GIG  +    +   L  +   +  +       +     L
Sbjct: 244 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAIIGLAGLTMEWAINQL 297

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
            R ++ W +                                       PLS       R 
Sbjct: 298 ERRLVFWPH--------------------------------------PPLSRLTAAPSRR 319

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L  +   F    L   +++         W   +        W  +   V   +  + +  
Sbjct: 320 LSALVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGVRDGSLTEAMQ- 371

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R +       +  +  G+ +G      +   P    L       + PL+ +
Sbjct: 372 -----ASLTRALAGAACGIVAGLVCGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTA 426

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V     N        +   + + +L     G        +EVA    +      R +IL
Sbjct: 427 WVG----NDETGKITFVALASFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLIL 482

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P   TG   +   AW  +I +E           TG+G+ +  + +    P ++ G+
Sbjct: 483 PGAAPAIFTGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPVIISGM 537

Query: 560 LIMCCFVLALNR 571
           L++      L+R
Sbjct: 538 LLIGLTGAVLDR 549



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 89/228 (39%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+  ++   +   SL +    +  R L+     ++   V   L   +     +  
Sbjct: 347 LPPPADVWHMLLQGVRDGSLTEAMQASLTRALAGAACGIVAGLVCGVLLGLNATSDALFT 406

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +   
Sbjct: 407 PTVATLRQIALFAWLPLLTAWVGNDETGKITFVALASFF--------PMLVASHRGIRQR 458

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L+EV++  +L    +   L +P + P +   + +S+   W   + +E  +   T   
Sbjct: 459 SQALQEVAQVLQLRLSTRLRVLILPGAAPAIFTGLRLSLIYAWLGTIGAEYFMSSGT--- 515

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             GIGS +  A +  D+  I+  ML +     + D++   L + M  W
Sbjct: 516 --GIGSLMINAQQLLDMPVIISGMLLIGLTGAVLDRVGLGLEQRMTRW 561



 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 16/263 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L +   ++    P   +       V  ++       +  ++    W     +      
Sbjct: 39  SILLKKTAIVWPAPPIARVYSLVVSIVVPLIVPLALLALWYISTHYGWMPAQILPAPDIV 98

Query: 374 QDVLYVIW------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                 +W         I++ R+   ++   +    +G  +G        + P    LA 
Sbjct: 99  AKTAVELWHNDLLPQLFISLQRLASGLLAGVLAGTLLGALMGTSRRAEHLLHPTVYALAQ 158

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL +          +     ++I      +  +   G    P+  +EVA +  
Sbjct: 159 IPTLGWIPLFMVLFGI----DDGLKLAVIIKAVIIPMTLHTQTGVRNAPHALQEVARTLR 214

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +    + LP   P ++TG   A   AW + IV E+ +       + G+G  +    
Sbjct: 215 LPWHQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGR 268

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           +      V + + I+    L + 
Sbjct: 269 QLFQLDIVFVCIAIIGLAGLTME 291


>gi|227115048|ref|ZP_03828704.1| putative sulfate ester transporter, permease component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 569

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 90/549 (16%), Positives = 180/549 (32%), Gaps = 71/549 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA + +  I         +     D+V    + L  + L      +  R+ S ++  +L 
Sbjct: 73  LALLALWYISTHYGWMPAQILPAPDVVANTAVELWHNDLLPQLFISLQRLASGLLAGVLA 132

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L   SRR   +L P +  +  IP LG++   +V F      K+          I
Sbjct: 133 GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 184

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  +T      + N+P  L+EV+R+ RL   Q+   L +P ++P  +  + +++S 
Sbjct: 185 IKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 244

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  ++  E++          GIG  +    +   L  +   +  +              
Sbjct: 245 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLAM------- 291

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322
              W+                            R      +    PLS       R L  
Sbjct: 292 --EWA--------------------------INRLERRLVFWPHPPLSRLTTAPSRRLSA 323

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +   F    L   +++         W   +        W  +   +   +  + +     
Sbjct: 324 LVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGIRDGSLTEAMQ---- 372

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R +   +   I  +  G+ +G      +   P    L       + PL+ + V 
Sbjct: 373 --ASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTAWVG 430

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               N  +     +   + + +L     G        +EVA    +  W   R +ILPG 
Sbjct: 431 ----NDEVGKITFVALASFFPMLVASHRGIRQRSQALQEVAQVLQLRLWTRLRVLILPGA 486

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G   +   AW  +I +E           TG+G+ +  + +    P ++ G+L++
Sbjct: 487 APAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLI 541

Query: 563 CCFVLALNR 571
                 L+R
Sbjct: 542 GLTGAVLDR 550



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+  ++   +   SL +    +  R L+  V  ++   V   L   +     +  
Sbjct: 348 LPPPADVWHMLLQGIRDGSLTEAMQASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFT 407

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +   
Sbjct: 408 PTVATLRQIALFAWLPLLTAWVGNDEVGKITFVALASFF--------PMLVASHRGIRQR 459

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L+EV++  +L  W +   L +P + P +   + +S+   W   + +E  +   T   
Sbjct: 460 SQALQEVAQVLQLRLWTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 516

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             GIGS +  A +  D+  I+  ML +     + D++   L + M  W
Sbjct: 517 --GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGLGLEQRMTRW 562



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 87/255 (34%), Gaps = 28/255 (10%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---------------- 377
           +     ++    +    +V  + + +A  ++ YI  H+ +                    
Sbjct: 48  VWPALPIARAYSLVMPILVVPLIVPLALLALWYISTHYGWMPAQILPAPDVVANTAVELW 107

Query: 378 --YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    I++ R+   ++   +    +G  +G        + P    LA  P   + P
Sbjct: 108 HNDLLPQLFISLQRLASGLLAGVLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIP 167

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +          +     ++I      +  +   G    P+  +EVA +  +   +   
Sbjct: 168 LFMVLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLI 223

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P ++TG   A   AW + IV E+ +       + G+G  +    +      V
Sbjct: 224 KLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLFQLDIV 277

Query: 556 VLGVLIMCCFVLALN 570
            + + ++    LA+ 
Sbjct: 278 FVCIAVIGLAGLAME 292


>gi|325527631|gb|EGD04934.1| ABC anion transporter, fused inner membrane subunits [Burkholderia
           sp. TJI49]
          Length = 186

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/170 (60%), Positives = 132/170 (77%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I ++ + + G  +T  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPEYALRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           AELAAIFAIFTSQ WNMTFS YQSL  +P DL EVSR F L+GWQ+FW L
Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 10/180 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DVLYVIW 381
           P       + + +    D   F ++  +           +    T Q      D   +  
Sbjct: 7   PNRTANASAWRVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPE 66

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T  R++  ++ +    +  G            + P   +L + P   F    V+  
Sbjct: 67  YALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFF 126

Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   L   L     +     W + F+        P+D  EV+  FH+TGW+ +  +
Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186


>gi|116334712|ref|YP_796239.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
 gi|116100059|gb|ABJ65208.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
          Length = 282

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 4/251 (1%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                L + A RT  R+   M+ SL F+ V+  +AA+ +     ++P++++++S+P+ GF
Sbjct: 23  FTFAQLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLESVPLRGF 82

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTFT  +FM  +P  V+G E  AIF +FT+Q WN+   +YQSL   P++L  V+  F  +
Sbjct: 83  LTFTTAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTVADPFGCN 142

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232
            WQ+FW L   +++PG++WNM++S S  WF +VA E   V       + LPGIGSYI +A
Sbjct: 143 SWQRFWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLILPGIGSYIQIA 202

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRK 291
           +      A+  A+  +L  +   +  LF+P+I  +  ++    T    P  S V  L   
Sbjct: 203 LDRSKFGAVAAALGALLVCVLFTNVCLFQPLIKGTVHYKYSTGTDNQLPPQSRVYDLVSH 262

Query: 292 TNFLRFIGYSS 302
               +++    
Sbjct: 263 AKLPKWLHQWG 273



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 7/218 (3%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++    Y     ++     TM R+ + ++ +    +  G+           I P   LL 
Sbjct: 16  VLGSKNYFTFAQLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLE 75

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ----WYILFNVIAGASAFPNDFKEV 482
           + P   F     +    +  N  L +  + IFG      W I+  +       P +   V
Sbjct: 76  SVPLRGFLTFTTAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTV 135

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG---HIHLRTTGL 539
           A  F    W+ +  +      P  +   + +   AW A +  E A+        L   G+
Sbjct: 136 ADPFGCNSWQRFWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLILPGI 195

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           G+YI  + ++  F  V   +  +   VL  N  L+ PL
Sbjct: 196 GSYIQIALDRSKFGAVAAALGALLVCVLFTNVCLFQPL 233


>gi|261821115|ref|YP_003259221.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605128|gb|ACX87614.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 533

 Score =  175 bits (445), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 85/532 (15%), Positives = 173/532 (32%), Gaps = 71/532 (13%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +      IV    I L  + L      +  R+ S ++  LL   +   L   SRR   +
Sbjct: 54  AQILPAPHIVANTAIELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHL 113

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P + ++  IP LG++   +V F           +   +  I  + +  +T      + 
Sbjct: 114 LHPTVYMLAQIPTLGWIPLFMVLFGID--------DALKLAVIIKAVIIPVTLHTQTGVR 165

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           N+P  L+EV+R+ RL   Q+   L +P + P  +  + +S+S  W  ++  E++      
Sbjct: 166 NVPPALQEVARTLRLPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIVVELLASSQ-- 223

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279
               GIG  +    +   L  +   +  +       + ++                    
Sbjct: 224 ----GIGYLLVWGRQLFQLDIVFVCITIIGLAGLTMEWVI-------------------- 259

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
                           +      +    PL        R L  +   F        +N+ 
Sbjct: 260 ---------------NQLENRLVFWPHPPLGRLTTAPSRRLSALILPFLLLLFWQQTNR- 303

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                   W   +        W  +   +++ +  + +        ++ R +   +   +
Sbjct: 304 ------FSWIDPLLFPPPADVWHMLLQGIHNDSLTEAMQ------ASLTRTLAGALCGIV 351

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  GI +G      +   P    L       + PL+ + V     N        +   
Sbjct: 352 AGLVCGILLGLNATSDALFTPTISTLRQIALFAWLPLLTAWVG----NDETGKITFVALA 407

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + +L     G        +EVA    +      R +ILPG  P    G   +   AW 
Sbjct: 408 SFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWL 467

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +I +E           TG+G+ +  + +    P ++ G+L++      L+R
Sbjct: 468 GTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDR 514



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 91/229 (39%), Gaps = 14/229 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+  ++   +   SL +    +  R L+  +  ++   V   L   +     +  P
Sbjct: 313 PPPADVWHMLLQGIHNDSLTEAMQASLTRTLAGALCGIVAGLVCGILLGLNATSDALFTP 372

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +    
Sbjct: 373 TISTLRQIALFAWLPLLTAWVGNDETGKITFVALASFF--------PMLVASHRGIRQRS 424

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L+EV++  +L    +   L +P + P +   + +S+   W   + +E  +   T    
Sbjct: 425 QALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT---- 480

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            GIGS +  A +  D+  I+  ML +     + D++    +  W  ++R
Sbjct: 481 -GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGL-GLEQWMTRWR 527



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 16/263 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               +  G +    P   +       +  ++       +  ++    W     +      
Sbjct: 4   SIALKKTGTVWPSLPITRVYSLVVPIIVPLVVPLALLALWYISTYYGWMPAQILPAPHIV 63

Query: 374 QDVLYVIW------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +    +W         I++ R+   ++   +    +G  +G        + P   +LA 
Sbjct: 64  ANTAIELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHLLHPTVYMLAQ 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL +          +     ++I      +  +   G    P   +EVA +  
Sbjct: 124 IPTLGWIPLFMVLFGI----DDALKLAVIIKAVIIPVTLHTQTGVRNVPPALQEVARTLR 179

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +    + LP  FP ++TG   +   AW + IV E+ +       + G+G  +    
Sbjct: 180 LPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIVVELLA------SSQGIGYLLVWGR 233

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           +      V + + I+    L + 
Sbjct: 234 QLFQLDIVFVCITIIGLAGLTME 256


>gi|116334711|ref|YP_796238.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
 gi|116100058|gb|ABJ65207.1| ABC-type anion transport system, duplicated permease component
           [Lactobacillus brevis ATCC 367]
          Length = 264

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 130/239 (54%), Gaps = 2/239 (0%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  +            IG++  +  + +   +IW   +T  RV+  ++++++I+IP+ +
Sbjct: 26  LWLTLWYFSLGCAMVGLIGFLATYLKWLNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAV 85

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W+   P   ++IQP+ Q++ + PA+V+ P+V   +         W+  L++ GTQWY  F
Sbjct: 86  WVASNPRRLNRIQPWGQVIGSIPADVYVPVVALLIVATGTTHQWWVIPLIMTGTQWYFFF 145

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NVIAG  A P D +EV   FH+ GWRWW   + P +FPY +T  I A G AWNA I +E+
Sbjct: 146 NVIAGYLAIPADIQEVTQVFHLKGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAEL 205

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            +WG       GLGAYIA +T+  + P    GVLI+C  V     F+W PLY +  R  
Sbjct: 206 ITWGTKQFSVAGLGAYIAGNTD--NKPAEATGVLIICGLVGICVIFIWQPLYRFAERRF 262



 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 6/214 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+  +L  +   TT R+L+A+V+S L     A   A + R    + P   ++ SIP   +
Sbjct: 53  LNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAVWVASNPRRLNRIQPWGQVIGSIPADVY 112

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    +  +          +   I  I T   W   F++      IP D++EV++ F L 
Sbjct: 113 VPVVALLIVATGTT----HQWWVIPLIMTGTQWYFFFNVIAGYLAIPADIQEVTQVFHLK 168

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           GW+ +     P   P L+  ++ +    W   +A+E+I  G     + G+G+YI  A   
Sbjct: 169 GWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAELITWGTKQFSVAGLGAYI--AGNT 226

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            +  A    +L + G++ +    +++P+  ++ +
Sbjct: 227 DNKPAEATGVLIICGLVGICVIFIWQPLYRFAER 260


>gi|253686557|ref|YP_003015747.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251753135|gb|ACT11211.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 532

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 85/528 (16%), Positives = 175/528 (33%), Gaps = 73/528 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L      + LR+       +    V  +L   +RRL  + +P+  ++  IP L ++ 
Sbjct: 72  PEELVHQLPISLLRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIP 131

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E   +  +  S    +T      +   P+ L E++RS RL   
Sbjct: 132 LLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRLPPA 183

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               YL +P  +P ++  + ++ S GW  ++A E++   +      G+G  +  + +   
Sbjct: 184 AFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQLFM 237

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           L  +   +L +  + F  +++L +    W     +     +   DS    L         
Sbjct: 238 LDLVFVCILIIGILGFAGERVLLKLERRW-----IHWPAPVLGRDSLGYAL--------- 283

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
              S   + +PL   V     +           ++ +      S ++D  W  +V G   
Sbjct: 284 PSLSLTPWLAPLVLVVLWQVSSTYE--------WVNVAFLPAPSRVIDALWTGLVQG--- 332

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                                ++     ++ R +    + S I + VG  +G        
Sbjct: 333 --------------------GLLIDLHASLLRALQGFTLGSAIGVLVGAVLGGWRIADRL 372

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             P    L       + PL+ +              + +     + ++     G +  P 
Sbjct: 373 FNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPP 428

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              EVA    +T  +  R +ILP + P   +G   A   AW  +I +E            
Sbjct: 429 ALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGE 483

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           GLG  +  + +      ++ GV+++       +R +         R L
Sbjct: 484 GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLI-----TLSERRL 526



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 90/248 (36%), Gaps = 17/248 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  V++  + +      +     P  ++D +   L    L      + LR L    +   
Sbjct: 295 LVLVVLWQVSSTYEWVNVAFLPAPSRVIDALWTGLVQGGLLIDLHASLLRALQGFTLGSA 354

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +    R    +  P L  ++ + +  +L     +F           E A I  
Sbjct: 355 IGVLVGAVLGGWRIADRLFNPALSALRCVALFAWLPLITAWFGLG--------ESAKIVF 406

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  +  Q +  +P  L EV++  RL+  Q    L +P  +P L   + +++ 
Sbjct: 407 IAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALM 466

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
             W   + +E  +         G+G  +  A +  +   I+  ++ +  V  L+ +L+  
Sbjct: 467 HAWTGAIGAEYFMPSGE-----GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITL 521

Query: 260 -FRPMIVW 266
             R +  W
Sbjct: 522 SERRLTRW 529


>gi|27366831|ref|NP_762358.1| nitrate ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|37676610|ref|NP_937006.1| nitrate transporter system, permease component [Vibrio vulnificus
           YJ016]
 gi|320158715|ref|YP_004191093.1| nitrate ABC transporter permease [Vibrio vulnificus MO6-24/O]
 gi|27358398|gb|AAO07348.1| Nitrate ABC transporter, permease protein [Vibrio vulnificus CMCP6]
 gi|37201153|dbj|BAC96976.1| nitrate transporter system, permease component [Vibrio vulnificus
           YJ016]
 gi|319934027|gb|ADV88890.1| nitrate ABC transporter permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 322

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++AS+I IP+GI +G    +     P  QLL  
Sbjct: 97  VKIRPYTGKPTFFDQIITSLVTVACGFMLASLIAIPLGIILGLNQGLYMAFNPIIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +         +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLL 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ WR  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLRLSWWRHIRIIVLPSAIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+++    L L+R +  
Sbjct: 271 KFVWDEFQNGSSDSLGRIMVAVIVIGLIGLLLDRGMLQ 308



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 88/207 (42%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +++ L       +   ++ L M   PI+ +++ +  L +L    +     Y
Sbjct: 115 SLVTVACGFMLASLIAIPLGIILGLNQGLYMAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++F +    +W    +    + ++ +DL  VS+  RLS W+    + 
Sbjct: 175 VSDDPLFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A++ +  +  L D+ +   +  + W
Sbjct: 289 MVAVIVIGLIGLLLDRGMLQCQRWLSW 315


>gi|227113234|ref|ZP_03826890.1| sulfate ester ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 531

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/567 (14%), Positives = 185/567 (32%), Gaps = 77/567 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVI 78
           L   L++     L       +       +  I      +P+        + +R++     
Sbjct: 32  LVVPLLVLAGWWLASRHGWMSEQILPSPLAVIDSARAFIPEELIHQLPISLIRLVIGFSG 91

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +    V  +L   +RRL  + +P+  ++  +P L ++   ++             E   
Sbjct: 92  GIALGLVLGSLFGLNRRLNALFMPLFTVIAQVPTLAWIPLLMLSLGIG--------EALK 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  +  S    +T      +   P+ L E++RS RL       YL +P  +P ++  + +
Sbjct: 144 LVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGIRL 203

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + S GW  ++A E++   +      G+G  +  + +   L  +   +L +  + F  +++
Sbjct: 204 AFSTGWVALIAVELLASSE------GLGYLLVQSRQLFMLDLVFVCILIIGVLGFAGERV 257

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           L +    W +               W   +  + +    +   S   +            
Sbjct: 258 LLKLERRWIH---------------WPAPVLGRDSLSTALPSLSLTPWL-------APLV 295

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            + + +      ++ +      S ++D  W  +V G                        
Sbjct: 296 LVALWQVSSVHEWVNVAFLPAPSSVIDALWTGLVQG-----------------------G 332

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ R +   ++ S I + VG  +G          P    L       + PL+ 
Sbjct: 333 LSVDLHASLLRALQGFVLGSAIGVLVGALLGGWRITDRLFNPALSALRCVALFAWLPLIT 392

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +              + +     + ++     G +  P    EVA    +T  +  R +I
Sbjct: 393 AWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLI 448

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + P   +G   A   AW  +I +E            GLG  +  + +      ++ G
Sbjct: 449 LPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGEGLGGMMIRAQQLLESDRIMAG 503

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           V+++       +R +         R L
Sbjct: 504 VVLIAAVAALFSRLI-----TLSERRL 525



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++D +   L    L      + LR L   V+      +   L    R    +  
Sbjct: 314 LPAPSSVIDALWTGLVQGGLSVDLHASLLRALQGFVLGSAIGVLVGALLGGWRITDRLFN 373

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  +L     +F           E A I  I  +  + +  +  Q +  +
Sbjct: 374 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 425

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L EV++  RL+  Q    L +P  +P L   + +++   W   + +E  +       
Sbjct: 426 PPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 482

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+G  +  A +  +   I+  ++ +  V  L+ +L+    R +  W
Sbjct: 483 --GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITLSERRLTRW 528


>gi|87119186|ref|ZP_01075084.1| putative nitrate transporter [Marinomonas sp. MED121]
 gi|86165577|gb|EAQ66844.1| putative nitrate transporter [Marinomonas sp. MED121]
          Length = 330

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 16/219 (7%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+     Y            +++ VV    +AS+I IP+GI IG    I S + P  Q+
Sbjct: 102 SYVAKTRPYTGKPTFFDQIGTSLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQI 161

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477
                   + PLV   VS  +++ +   S         +     W  L N   G +A   
Sbjct: 162 FKPVSPLAWLPLVTMVVSATYVSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDK 221

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D   V+    +      R I++P   P   TG   + G AW   I +E+ +      +  
Sbjct: 222 DLLNVSKVLRLNWLTHVRKIVVPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNP 275

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           GLG ++ +  + G   S   +++ VL++      L+R +
Sbjct: 276 GLGKFVWDEFQNGSSNSLGRIMVAVLMIGFIGFVLDRAM 314



 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 85/207 (41%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +++   ++ L       L   +  +   L PI+ I + +  L +L    +     Y
Sbjct: 123 SLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQIFKPVSPLAWLPLVTMVVSATY 182

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L ++F +    +W    +    +  I +DL  VS+  RL+       + 
Sbjct: 183 VSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDKDLLNVSKVLRLNWLTHVRKIV 242

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           VP S+P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 243 VPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 296

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266
           + A+L +  + F+ D+  L  + M+ W
Sbjct: 297 MVAVLMIGFIGFVLDRAMLSLQKMVSW 323


>gi|89072206|ref|ZP_01158785.1| putative nitrate transporter [Photobacterium sp. SKA34]
 gi|89051738|gb|EAR57190.1| putative nitrate transporter [Photobacterium sp. SKA34]
          Length = 324

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y            ++  V    I+AS+I IP+G+ +G    +     P  QLL       
Sbjct: 104 YTGKATFFDQIVTSLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLA 163

Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + PLV   VS  ++  +  ++       L +   + W  L N   G +    D   V+  
Sbjct: 164 WLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRV 223

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG ++ +
Sbjct: 224 LRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWD 277

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   +++ V+++    L L+R +
Sbjct: 278 EFQNGSASSLSRIMVAVVMIGFIGLMLDRLM 308



 Score =  140 bits (354), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 87/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +++ +       +   + +L M   PI+ +++ +  L +L    +     Y
Sbjct: 117 SLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASY 176

Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             K   V  + L ++  +    +W    +    + N+ +DL  VSR  RLS WQ    + 
Sbjct: 177 VTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIV 236

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSASSLSRI 290

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A++ +  +  + D+L+ 
Sbjct: 291 MVAVVMIGFIGLMLDRLML 309


>gi|227327597|ref|ZP_03831621.1| sulfate ester ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 531

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 83/567 (14%), Positives = 184/567 (32%), Gaps = 77/567 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVI 78
           L   L++     L       +       +  I      +P+        + +R++     
Sbjct: 32  LIVPLLVLAGWWLASRHGWMSEQILPSPLAVIDSARAFIPEELIHQLPISLIRLVIGFSG 91

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +    V  +L   +RRL  + +P+  ++  IP L ++   ++             E   
Sbjct: 92  GIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIPLLMLSLGIG--------EALK 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  +  S    +T      +   P+ L E++RS RL       YL +P  +P ++  + +
Sbjct: 144 LVVLVKSVTVPVTLYTCAGIQQTPQKLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRL 203

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + S GW  ++A E++   +      G+G  +  + +   L  +   +L +  + F  +++
Sbjct: 204 AFSTGWVALIAVELLASSE------GLGYLLVQSRQLFMLDLVFVCILIIGILGFAGERV 257

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
           L +    W +               W   +  + +    +   S   +            
Sbjct: 258 LLKLERRWIH---------------WPAPVLGRDSLSTALPSLSLTPWL-------APVV 295

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            + + +      ++ +      S +LD  W  +  G  +                     
Sbjct: 296 LVALWQVSSVHEWVNVAFLPAPSSVLDALWRGLAQGGLLADL------------------ 337

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  ++ R +   ++ S I + VG  +G          P    L       + PL+ 
Sbjct: 338 -----HASLLRALQGFVLGSAIGVLVGALLGGWRIADRLFNPALSALRCVALFAWLPLIT 392

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +              + +     + ++     G +  P    EVA    +T  +  R +I
Sbjct: 393 AWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLI 448

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + P   +G   A   AW  +I +E            GLG  +  + +      ++ G
Sbjct: 449 LPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGEGLGGMMIRAQQLLESDRIMAG 503

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           V+++       +R +         R L
Sbjct: 504 VVLIAAVAALFSRLI-----TLSERRL 525



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++D +   L    L      + LR L   V+      +   L    R    +  
Sbjct: 314 LPAPSSVLDALWRGLAQGGLLADLHASLLRALQGFVLGSAIGVLVGALLGGWRIADRLFN 373

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  +L     +F           E A I  I  +  + +  +  Q +  +
Sbjct: 374 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 425

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L EV++  RL+  Q    L +P  +P L   + +++   W   + +E  +       
Sbjct: 426 PPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 482

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+G  +  A +  +   I+  ++ +  V  L+ +L+    R +  W
Sbjct: 483 --GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITLSERRLTRW 528


>gi|90577437|ref|ZP_01233248.1| putative nitrate transporter [Vibrio angustum S14]
 gi|90440523|gb|EAS65703.1| putative nitrate transporter [Vibrio angustum S14]
          Length = 324

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y            ++  V    I+AS+I IP+G+ +G    +     P  QLL       
Sbjct: 104 YTGKATFFDQIVTSLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLA 163

Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + PLV   VS  ++  +  ++       L +   + W  L N   G +    D   V+  
Sbjct: 164 WLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRV 223

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG ++ +
Sbjct: 224 LRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWD 277

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   +++ V+++    L L+R +
Sbjct: 278 EFQNGSAASLSRIMVAVVMIGFIGLMLDRLM 308



 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 87/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +++ +       +   + +L M   PI+ +++ +  L +L    +     Y
Sbjct: 117 SLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASY 176

Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             K   V  + L ++  +    +W    +    + N+ +DL  VSR  RLS WQ    + 
Sbjct: 177 VTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIV 236

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAASLSRI 290

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A++ +  +  + D+L+ 
Sbjct: 291 MVAVVMIGFIGLMLDRLML 309


>gi|260768120|ref|ZP_05877054.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616150|gb|EEX41335.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 322

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V     +AS+I IP+GI +G    +     P  QLL  
Sbjct: 97  VRIRPYTGKPTFFDQIGTSLVTVAAGFALASLIAIPLGIVLGLNHGLYQAFNPIIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +         +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLI 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 84/200 (42%), Gaps = 12/200 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +   ++ L       +   +  L     PI+ +++ +  L +L    +     Y
Sbjct: 115 SLVTVAAGFALASLIAIPLGIVLGLNHGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++F +    +W    +    + ++ +DL  VS+  RLS WQ    + 
Sbjct: 175 VSDDPMFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           + A++ +  +  L D+ + +
Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ 308


>gi|254418147|ref|ZP_05031871.1| ABC transporter, permease protein [Brevundimonas sp. BAL3]
 gi|196184324|gb|EDX79300.1| ABC transporter, permease protein [Brevundimonas sp. BAL3]
          Length = 365

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 16/227 (7%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            G+     G  V  F Y      I     ++F V     +A+++ +P+G+  G     ++
Sbjct: 132 AGLEAAGRGGEVRDFRYAGSPSFIDQIFTSLFTVAFGFGLATVVAVPLGLVCGLSKGFNA 191

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVI 469
              P  Q+        + P+V   VS     P+  L       +++++  + W  L N  
Sbjct: 192 AFNPLVQIFKPISPLAWLPIVTMVVSATMTRPDPALPKSFVISAVVVMLCSLWPTLINTA 251

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            GA++   D   V     ++ +   R +ILP   PY  TG   + G  W   I +E+ + 
Sbjct: 252 VGAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWMVLIAAEMLA- 310

Query: 530 GHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
                +  GLG ++ +  + G   S   ++  V+++      L+R +
Sbjct: 311 -----QNPGLGKFVWDEFQNGSEQSLARIMFAVIVIGLIGFLLDRLM 352



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +     ++ +       +   S+       P++ I + I  L +L    +      
Sbjct: 161 SLFTVAFGFGLATVVAVPLGLVCGLSKGFNAAFNPLVQIFKPISPLAWLPIVTMVVSATM 220

Query: 128 P---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + + +   +    +W    +      +I RDL  V R  RLS + +   L 
Sbjct: 221 TRPDPALPKSFVISAVVVMLCSLWPTLINTAVGAASIDRDLLNVGRVLRLSPFARLRRLI 280

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLAI 241
           +P ++P +   M +S+  GW  ++A+EM+         PG+G ++    +   EQ L  I
Sbjct: 281 LPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSEQSLARI 334

Query: 242 LYAMLTMLGVIFLYDQLL 259
           ++A++ +  + FL D+L+
Sbjct: 335 MFAVIVIGLIGFLLDRLM 352


>gi|71282501|ref|YP_269991.1| putative nitrate ABC transporter permease [Colwellia
           psychrerythraea 34H]
 gi|71148241|gb|AAZ28714.1| putative nitrate ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 315

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 16/218 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y+     Y            ++F V    ++A+II IP+GIW+G    ++S I P  Q+ 
Sbjct: 88  YVGKIRAYTGKETFFDQILTSLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIF 147

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPND 478
                  + PLV   VS  +++ +  +S       + +   + W ++ N   G S+  +D
Sbjct: 148 KPVSPLAWLPLVTMVVSALYVSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSD 207

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              V+    +      + I++P   P   TG   + G AW   I +E+ +      +  G
Sbjct: 208 LLNVSKVLRLPTLTHIKKIVIPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPG 261

Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           LG ++ +  + G   S   ++  V+++      L+R +
Sbjct: 262 LGKFVWDEFQNGSSDSLARIMAAVIVIGFIGFLLDRAM 299



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 12/201 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +    +++ +           ++RL   + PI+ I + +  L +L    +    
Sbjct: 106 LTSLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSA 165

Query: 126 LY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           LY      V  + L ++  +    +W M  +    + +I  DL  VS+  RL        
Sbjct: 166 LYVSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKK 225

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239
           + +P S+P +   M +S    W  ++A+EM+         PG+G ++    +      L 
Sbjct: 226 IVIPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLA 279

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            I+ A++ +  + FL D+ + 
Sbjct: 280 RIMAAVIVIGFIGFLLDRAML 300


>gi|323497142|ref|ZP_08102162.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323317717|gb|EGA70708.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 322

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+ + IP+GI +G    +     P  QLL  
Sbjct: 97  VKIRPYTGKPTFFDQIVTSLITVASGFLLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLLLDRGMLQ 308



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 88/207 (42%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + S  +++         +   ++ +     P++ +++ +  L +L    +     Y
Sbjct: 115 SLITVASGFLLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266
           + A++T+  +  L D+  L  + ++ W
Sbjct: 289 MVAVITIGFIGLLLDRGMLQLQKLLSW 315


>gi|315179819|gb|ADT86733.1| nitrate transporter system, permease component [Vibrio furnissii
           NCTC 11218]
          Length = 322

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V     +AS+I IP+GI +G    +   + P  QLL  
Sbjct: 97  VRIRPYTGKPTFFDQIGTSLVTVAAGFALASLIAIPLGIVLGLNHGLYQAVNPIIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSVWPTLINTAVGVTSVDKDLI 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308



 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 84/200 (42%), Gaps = 12/200 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +   ++ L       +   +  L   + PI+ +++ +  L +L    +     Y
Sbjct: 115 SLVTVAAGFALASLIAIPLGIVLGLNHGLYQAVNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    VW    +    + ++ +DL  VS+  RLS WQ    + 
Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSVWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           + A++ +  +  L D+ + +
Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ 308


>gi|218249102|ref|YP_002374473.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|257062188|ref|YP_003140076.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|218169580|gb|ACK68317.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|256592354|gb|ACV03241.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 277

 Score =  170 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +GI IG    I   + P  Q+L   P   + P+  
Sbjct: 79  LFWQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLPIA- 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   NP+     ++     W I+ N   G    P D+K VA    ++G++++  I+
Sbjct: 138 -LAGFEEANPS--AIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFKYFWEIM 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A + +E+   G       G+G +I +S      PE+++ 
Sbjct: 195 FPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSQLPEIIVA 248

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+R +
Sbjct: 249 LIYVGLVGLILDRLV 263



 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +  R+     ++ +       L   +  +   + PI  +++++P L +L  
Sbjct: 77  KGLFWQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLPI 136

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F    P        +AIF IF + +W +  +    +  IP+D + V++  RLSG++
Sbjct: 137 ALAGFEEANP--------SAIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFK 188

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P ++P +   + + +   W  +VA+EM+V G       GIG +I  +     L
Sbjct: 189 YFWEIMFPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDSYNSSQL 242

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V  + D+L+
Sbjct: 243 PEIIVALIYVGLVGLILDRLV 263


>gi|254503979|ref|ZP_05116130.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440050|gb|EEE46729.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 360

 Score =  170 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + H TY      I     ++  V +  +IA+II +P+GI  G     +  I P  Q+   
Sbjct: 138 IKHRTYTGKPTYIDQIGTSLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  + NP  WLS       + +   + W  L N   G ++   D  
Sbjct: 198 VSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLM 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     +  W+    ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ VL +      L+R ++     + +    
Sbjct: 312 KFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLMFALQRAFTFSANR 360



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L +    +I+ +        +  SR     + P++ I + +  L +L    +     Y
Sbjct: 156 SLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215

Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L +   +    +W    +    + ++ +DL  V R  +L  W+    L 
Sbjct: 216 ANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLV 275

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + F+ D+L+F
Sbjct: 330 MVAVLTIGLIGFMLDRLMF 348


>gi|149377870|ref|ZP_01895600.1| putative nitrate transporter [Marinobacter algicola DG893]
 gi|149357872|gb|EDM46364.1| putative nitrate transporter [Marinobacter algicola DG893]
          Length = 331

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     ++  V+   ++A+II +P+GI IG   H S+ I P  Q+   
Sbjct: 111 VKIRDYPGAPTFVDQIFTSLGTVLAGFVLATIIAVPLGIIIGLNRHFSAAINPLIQIFKP 170

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +       L   + +   + W  L N   G SA   D  
Sbjct: 171 VSPLAWLPLVTMVVSATYVSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVSAVNPDLL 230

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W   R ++LP   P   TG   + G AW   I +E+ +      ++ GLG
Sbjct: 231 NVSKVLQLSFWTHVRKVVLPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLG 284

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ VL +      L+R +
Sbjct: 285 KFVWDEFQNGSSESLSRIMVAVLAIGFIGFLLDRIM 320



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 86/209 (41%), Gaps = 14/209 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L+  V++ +       +   +R     + P++ I + +  L +L    +     Y
Sbjct: 129 SLGTVLAGFVLATIIAVPLGIIIGLNRHFSAAINPLIQIFKPVSPLAWLPLVTMVVSATY 188

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L ++  +    +W    +    +  +  DL  VS+  +LS W     + 
Sbjct: 189 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVSAVNPDLLNVSKVLQLSFWTHVRKVV 248

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 249 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGSSESLSRI 302

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSN 268
           + A+L +  + FL D+  LL +  + W+ 
Sbjct: 303 MVAVLAIGFIGFLLDRIMLLIQKKVAWNE 331


>gi|21666014|gb|AAM73542.1|AF283498_2 nitrate transporter integral membrane protein [Azospirillum
           brasilense]
          Length = 363

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     ++  V    ++ +++ +P+G+  G    +++ + P  Q+   
Sbjct: 141 VKTRPYAGKPTYLDQILTSLKTVFTGFLLGALVAVPLGVACGLSRTVNAAMNPLIQIFKP 200

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS    + N       L  ++ +   + W  L N   G S+   D  
Sbjct: 201 VSPLAWLPLVTMVVSATVSSDNPTFEKSFLTSAVTVTLCSLWPTLINTAVGVSSIDKDLM 260

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     ++G    R ++LP   PY  TG   + G  W   I +E+ +      +  GLG
Sbjct: 261 NVGKVLQLSGPTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 314

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ V  +      L+R +
Sbjct: 315 KFVWDEFQNGSSSSLARIMVAVFTIGLIGFLLDRVM 350



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 85/222 (38%), Gaps = 13/222 (5%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P   V   P       L Q    +   + +  ++  L           SR +   + P++
Sbjct: 137 PAAEVKTRPYAGKPTYLDQ-ILTSLKTVFTGFLLGALVAVPLGVACGLSRTVNAAMNPLI 195

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I + +  L +L    +               + L +   +    +W    +    + +I
Sbjct: 196 QIFKPVSPLAWLPLVTMVVSATVSSDNPTFEKSFLTSAVTVTLCSLWPTLINTAVGVSSI 255

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +DL  V +  +LSG      L +P ++P +   + +S+  GW  ++A+EM+        
Sbjct: 256 DKDLMNVGKVLQLSGPTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------Q 309

Query: 222 LPGIGSYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260
            PG+G ++    +      L  I+ A+ T+  + FL D+++ 
Sbjct: 310 NPGLGKFVWDEFQNGSSSSLARIMVAVFTIGLIGFLLDRVML 351


>gi|50123217|ref|YP_052384.1| sulfate ester ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613743|emb|CAG77194.1| sulfate ester ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 543

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 76/528 (14%), Positives = 174/528 (32%), Gaps = 73/528 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L      + +R++      +    V  +L   +RRL  + +P+  ++  IP L ++ 
Sbjct: 83  PEELIHQLPISLMRLVIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIP 142

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E   +  +  S    +T      +   P+ L E+ RS RL   
Sbjct: 143 LLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMVRSLRLPPV 194

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               YL +P  +P ++  + ++ S GW  ++A E++   +      G+G  +  + +   
Sbjct: 195 AFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQLFM 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           L  +   +L +  + F  +++L +                             +  ++ +
Sbjct: 249 LDLVFVCILIIGILGFTGERVLLKL----------------------------ERRWIHW 280

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                        +++     +L +  +  P   + L         +++ +      V  
Sbjct: 281 PAPVLGR------DSLSYALPSLSLTPWLAPLMLIALWQISSTREWVNVAFLPAPSDVIE 334

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +       ++      D+         ++ R +   ++ S I + VG  +G        
Sbjct: 335 AL----WSGLIQGGLLADL-------NASLLRALQGFMLGSAIGVLVGALLGGWRIADKL 383

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             P    L       + PL+ +              + +     + ++     G +  P 
Sbjct: 384 FNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPP 439

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              EVA    +T  +  R +ILP + P   +G   A   AW  +I +E            
Sbjct: 440 ALLEVAQVLRLTPMQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGE 494

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           GLG  +  + +      ++ GV+++       +R +         R L
Sbjct: 495 GLGGMMIRAQQLLESDRIMAGVVLIAVVAALFSRLI-----TLSERRL 537



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+++ +   L    L    + + LR L   ++      +   L    R    +  
Sbjct: 326 LPAPSDVIEALWSGLIQGGLLADLNASLLRALQGFMLGSAIGVLVGALLGGWRIADKLFN 385

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  +L     +F           E A I  I  +  + +  +  Q +  +
Sbjct: 386 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 437

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L EV++  RL+  Q    L +P  +P L   + +++   W   + +E  +       
Sbjct: 438 PPALLEVAQVLRLTPMQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 494

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+G  +  A +  +   I+  ++ +  V  L+ +L+    R +  W
Sbjct: 495 --GLGGMMIRAQQLLESDRIMAGVVLIAVVAALFSRLITLSERRLTRW 540


>gi|260221748|emb|CBA30622.1| Nitrate transport permease protein nrtB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 287

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 12/221 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ +          D    I LG  ++ RV +  ++A ++ IP+G  IG  P +   + 
Sbjct: 74  IWKHLADPFYDKGPNDKGIAIQLGH-SLARVGLGFLLACVVAIPLGFVIGMSPLLHKALD 132

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     + +     ++   + W +L N   G ++   ++
Sbjct: 133 PFIQILKPISPLAWMPLALYTIK----DSSASGIFVIFICSVWPMLINTAFGVASVKREW 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 189 LNVARTLEVKPLRKAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGI 242

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           G ++       S   V+  + ++    + L+  ++  L  +
Sbjct: 243 GYFVWNEWNNLSLTNVLFAIGVIGVMGMLLD-LVFARLQKW 282



 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 15/202 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+    +++ +       +   S  L   L P + I++ I  L ++   +    
Sbjct: 96  LGHSLARVGLGFLLACVVAIPLGFVIGMSPLLHKALDPFIQILKPISPLAWMPLALY--- 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  +  + IF IF   VW M  +    + ++ R+   V+R+  +   +K + + 
Sbjct: 153 -----TIKDSSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLRKAFQVI 207

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L  +L+A
Sbjct: 208 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVLFA 261

Query: 245 MLTMLGVIFLYDQLLFRPMIVW 266
           +  +  +  L D L+F  +  W
Sbjct: 262 IGVIGVMGMLLD-LVFARLQKW 282


>gi|260366125|ref|ZP_05778585.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus K5030]
 gi|260879767|ref|ZP_05892122.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260896812|ref|ZP_05905308.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus Peru-466]
 gi|260902977|ref|ZP_05911372.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AQ4037]
 gi|308087350|gb|EFO37045.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus Peru-466]
 gi|308092367|gb|EFO42062.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308108312|gb|EFO45852.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus AQ4037]
 gi|308114769|gb|EFO52309.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein
           [Vibrio parahaemolyticus K5030]
 gi|328470814|gb|EGF41725.1| nitrate ABC transporter permease protein [Vibrio parahaemolyticus
           10329]
          Length = 321

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|153837223|ref|ZP_01989890.1| nitrate transporter system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|149749486|gb|EDM60240.1| nitrate transporter system, permease component [Vibrio
           parahaemolyticus AQ3810]
          Length = 323

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 98  VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 157

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 158 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 217

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 218 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 271

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 272 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 309



 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 116 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 175

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 176 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 235

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 236 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 289

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 290 MVAVITIGFIGLMLDRGMLQ-LQKW 313


>gi|28900912|ref|NP_800567.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809358|dbj|BAC62400.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633]
          Length = 307

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 82  VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 141

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 142 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 201

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 202 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 255

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 256 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 293



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 100 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 159

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 160 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 219

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 220 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 273

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 274 MVAVITIGFIGLMLDRGMLQ-LQKW 297


>gi|260777511|ref|ZP_05886405.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260607177|gb|EEX33451.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 322

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+++ IP+GI +G    +     P  QLL  
Sbjct: 97  VKIRPYTGKPTFFDQIITSLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLI 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 308



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ L       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 115 SLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 175 VSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 289 MVAVITIGFIGLMLDRGMLQ-LQKW 312


>gi|91224555|ref|ZP_01259816.1| putative nitrate transporter [Vibrio alginolyticus 12G01]
 gi|91190443|gb|EAS76711.1| putative nitrate transporter [Vibrio alginolyticus 12G01]
          Length = 321

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|262396901|ref|YP_003288754.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25]
 gi|262340495|gb|ACY54289.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 321

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|332994482|gb|AEF04537.1| putative nitrate ABC transporter permease [Alteromonas sp. SN2]
          Length = 331

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 16/218 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y      +            +++ V+V  +IAS+I +PVGI  G      + I P  QL 
Sbjct: 104 YEPKTREFTGSPTFFDQIWTSLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLF 163

Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478
                  + PLV   VS  +++ +       +  +L +     W  L N   G SA   D
Sbjct: 164 KPVSPLAWLPLVTMVVSALYVSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKD 223

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              V+    +T       IILP   P   TG   + G  W   I +E+ +      +  G
Sbjct: 224 LLNVSKVLRLTPMSHLTKIILPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPG 277

Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           LG ++ +  + G   S   +++ VL +      L+R +
Sbjct: 278 LGKFVWDEFQNGSSESLARIMVAVLTIGAIGFILDRIM 315



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 86/207 (41%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   ++   +I+ +       L   S+     + P++ + + +  L +L    +    LY
Sbjct: 124 SLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLFKPVSPLAWLPLVTMVVSALY 183

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + +   +    +W    +    +  I +DL  VS+  RL+       + 
Sbjct: 184 VSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKDLLNVSKVLRLTPMSHLTKII 243

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A+LT+  + F+ D+++   +  + W
Sbjct: 298 MVAVLTIGAIGFILDRIMLSVQRAVSW 324


>gi|327482790|gb|AEA86100.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 289

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 20/268 (7%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---------AWQSIG 365
           +  R   +++        QL     +  +L + W  +  G    +          W+ I 
Sbjct: 19  RPSRAAALMQRSGRYAVQQLLPPLVILLVLGVIWEMLCSGADAALPPPSQVIAETWELIV 78

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                    DV  + W    ++ RV V  ++A +  + +G+ IG        + P  Q+L
Sbjct: 79  DPFYDNGGNDVG-LAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVL 137

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++     H +       ++     W I+ N   G    P D++ VA  
Sbjct: 138 RTVPPLAWLPLSLAGFQDSHPS----ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQV 193

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             + G+ +++ I+LP   PY  TG     G +W A I +E+   G       G+G +I +
Sbjct: 194 LQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWD 247

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       +++L ++ +      L+R +
Sbjct: 248 AWNASRISDIILALVYIGVVGFVLDRLV 275



 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+    +++++       L  +S      L PI  +++++P L +L  +
Sbjct: 90  GLAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLS 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F + +P        +A+F IF + +W +  +    + NIP+D   V++  +L+G++ 
Sbjct: 150 LAGFQDSHP--------SALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEY 201

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P + P +   + + +   W  ++A+EM++ G       GIG +I  A     + 
Sbjct: 202 FKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNASRIS 255

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F+ D+L+
Sbjct: 256 DIILALVYIGVVGFVLDRLV 275


>gi|261823527|ref|YP_003261633.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261607540|gb|ACX90026.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 536

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/531 (14%), Positives = 173/531 (32%), Gaps = 73/531 (13%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L      + +R+       +    V  +L   +RRL  + +P+  ++  IP L 
Sbjct: 73  DFVPEELIHQLPISLMRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLA 132

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   ++             E   +  +  S    +T      +   P+ L E++RS RL
Sbjct: 133 WIPLLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRL 184

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
                  YL +P  +P ++  + ++ S GW  ++A E++   +      G+G  +  + +
Sbjct: 185 PPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQ 238

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
              L  +   +L +  + F  +++L +    W +               W   +  + + 
Sbjct: 239 LFMLDLVFVCILIIGILGFSGERVLLKLERRWIH---------------WPAPILGRDSL 283

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
              +   S   +             + + +      ++ +      S +++  W  +V G
Sbjct: 284 SSALSGLSLTPWL-------APLVLVALWQVSSTREWVNVAFLPAPSDVIEALWSGLVQG 336

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
             +                            ++ R +   ++ S I   VG  +G     
Sbjct: 337 GLLADLN-----------------------ASLLRALQGFLLGSGIGALVGALLGNWRIA 373

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
                P    L       + PL+ +              + +     + ++     G + 
Sbjct: 374 DRLFNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQ 429

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P    EVA    +T  +  R ++LP + P   +G   A   AW  +I +E         
Sbjct: 430 LPPALLEVAQVLRLTPIQTLRTLVLPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----P 484

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              GLG  +  + +      ++ GV+++       +R +         R L
Sbjct: 485 SGEGLGGMMIRAQQLLESDRIMAGVVLIAIVAALFSRLI-----ALSERRL 530



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+++ +   L    L    + + LR L   ++      +   L    R    +  
Sbjct: 319 LPAPSDVIEALWSGLVQGGLLADLNASLLRALQGFLLGSGIGALVGALLGNWRIADRLFN 378

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  +L     +F           E A I  I  +  + +  +  Q +  +
Sbjct: 379 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 430

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L EV++  RL+  Q    L +P  +P L   + +++   W   + +E  +       
Sbjct: 431 PPALLEVAQVLRLTPIQTLRTLVLPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 487

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
             G+G  +  A +  +   I+  ++ +  V  L+ +L+    R +  W
Sbjct: 488 --GLGGMMIRAQQLLESDRIMAGVVLIAIVAALFSRLIALSERRLTRW 533


>gi|269967484|ref|ZP_06181541.1| putative nitrate transporter [Vibrio alginolyticus 40B]
 gi|269827925|gb|EEZ82202.1| putative nitrate transporter [Vibrio alginolyticus 40B]
          Length = 321

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLV 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|332529936|ref|ZP_08405887.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
 gi|332040633|gb|EGI77008.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
          Length = 305

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW+ +          D    I LG  ++ RV +  ++A ++ +P+G  IG  P +   + 
Sbjct: 92  AWKHLSNPFYDNGPNDKGIAIQLGH-SLARVGLGFLLACLVAVPLGFVIGMSPLLRRALD 150

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+ Q+L       + PL +  +     + +     ++   + W +L N   G +A   D+
Sbjct: 151 PYIQVLKPISPLAWMPLALYTIK----DSSASGIFVIFICSVWPMLINTAFGVAAVRRDW 206

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA++  ++  R    +ILP   P  VTG   + G AW   + +E+   G      TG+
Sbjct: 207 LNVAATLEVSPLRKAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 260

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G ++       S   V+  + ++    + L+     
Sbjct: 261 GYFVWNEWNNLSLSNVIFAITVIGVVGMLLDLLFGR 296



 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+    +++ L       +   S  L   L P + +++ I  L ++   +    
Sbjct: 114 LGHSLARVGLGFLLACLVAVPLGFVIGMSPLLRRALDPYIQVLKPISPLAWMPLALY--- 170

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  +  + IF IF   VW M  +    +  + RD   V+ +  +S  +K + + 
Sbjct: 171 -----TIKDSSASGIFVIFICSVWPMLINTAFGVAAVRRDWLNVAATLEVSPLRKAFLVI 225

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +V  M +SM   W  +VA+EM+V G       GIG ++        L  +++A
Sbjct: 226 LPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLSNVIFA 279

Query: 245 MLTMLGVIFLYDQLLFR 261
           +  +  V  L D L  R
Sbjct: 280 ITVIGVVGMLLDLLFGR 296


>gi|156976813|ref|YP_001447719.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116]
 gi|156528407|gb|ABU73492.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116]
          Length = 321

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|288962947|ref|YP_003453241.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288915213|dbj|BAI76697.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 360

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     ++  V    ++ +++ +P+G+  G  P +++ I P  Q+   
Sbjct: 138 VKTRPYAGKPTYLDQIVTSLKTVFTGFLLGALVAVPLGVASGLSPTVNAAINPLIQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS      +       L  ++ +   + W  L N   G S+   D  
Sbjct: 198 VSPLAWLPLVTMVVSATVSGGDPLFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDRDLM 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     ++G+   R ++LP   PY  TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S  ++++ V  +      L+R +
Sbjct: 312 KFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVM 347



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 13/222 (5%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+  V   P       L Q    +   + +  ++  L        +  S  +   + P++
Sbjct: 134 PKAEVKTRPYAGKPTYLDQ-IVTSLKTVFTGFLLGALVAVPLGVASGLSPTVNAAINPLI 192

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I + +  L +L    +       G     E   L +   +    +W    +    + +I
Sbjct: 193 QIFKPVSPLAWLPLVTMVVSATVSGGDPLFEKSFLTSAITVTLCSLWPTLINTAVGVSSI 252

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            RDL  V +  +LSG+     L +P ++P +   + +S+  GW  ++A+EM+        
Sbjct: 253 DRDLMNVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------Q 306

Query: 222 LPGIGSYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260
            PG+G ++    +      L  I+ A+ T+  + FL D+++ 
Sbjct: 307 NPGLGKFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVML 348


>gi|269963835|ref|ZP_06178149.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831453|gb|EEZ85598.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 321

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+II IP+GI +G    +     P  QLL  
Sbjct: 96  VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       + +   + W  L N   G ++   D  
Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ +       +   ++ L     PI+ +++ +  L +L    +     Y
Sbjct: 114 SLVTVTAGFLLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  + D+ + + +  W
Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311


>gi|330448062|ref|ZP_08311710.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492253|dbj|GAA06207.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 324

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 16/209 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    Y            ++  V    ++AS+I IP+G+ +G    +     P  QLL  
Sbjct: 99  IRVRQYTGKATFFDQIGTSLVTVTCGFLLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKP 158

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +  ++         +   + W  L N   G +    D  
Sbjct: 159 VSPLAWLPLVTMVVSASYVSDDPLVAKSFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLV 218

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  + I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 219 NVSRVLRLSPWQHVKTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLG 272

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFV 566
            ++ +  + G   S   +++ V+++    
Sbjct: 273 KFVWDEFQNGSSQSLGRIMVAVVMIGFIG 301



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 83/190 (43%), Gaps = 9/190 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +++ +       L   + +L M   P++ +++ +  L +L    +     Y
Sbjct: 117 SLVTVTCGFLLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASY 176

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V  + L ++F +    +W    +    + N+ +DL  VSR  RLS WQ    + 
Sbjct: 177 VSDDPLVAKSFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIV 236

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +     ++   
Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 290

Query: 245 MLTMLGVIFL 254
           M+ ++ + F+
Sbjct: 291 MVAVVMIGFI 300


>gi|254490864|ref|ZP_05104047.1| ABC transporter, permease protein [Methylophaga thiooxidans DMS010]
 gi|224464036|gb|EEF80302.1| ABC transporter, permease protein [Methylophaga thiooxydans DMS010]
          Length = 340

 Score =  168 bits (426), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 16/215 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V V  ++AS+I IP+GI  G    + S I P  Q+   
Sbjct: 115 VTIRPYTGKETFFDQILTSLATVFVGFLLASVIAIPIGIVAGLSNTLYSAINPLIQIFKP 174

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ N       +  ++ ++  + W  L N   G S+   D  
Sbjct: 175 VSPLAWLPIVTMVVSALYVSDNPLFAKSFVTSAITVMLCSLWPTLINTAVGVSSIDKDLI 234

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            VA    +        +++P   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 235 NVARVLRLNYLTTIYKVVIPASIPMIFTGLRISLGIGWMVLIAAEMLA------QNPGLG 288

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRF 572
            ++ +  + G   S   +++ VL +      L+R 
Sbjct: 289 KFVWDEFQNGSSESLSRIMVAVLTIGIVGFILDRI 323



 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 84/199 (42%), Gaps = 12/199 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +    +++ +       +A  S  L   + P++ I + +  L +L    +    
Sbjct: 131 LTSLATVFVGFLLASVIAIPIGIVAGLSNTLYSAINPLIQIFKPVSPLAWLPIVTMVVSA 190

Query: 126 LYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           LY         + + +   +    +W    +    + +I +DL  V+R  RL+     + 
Sbjct: 191 LYVSDNPLFAKSFVTSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYK 250

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239
           + +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L 
Sbjct: 251 VVIPASIPMIFTGLRISLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLS 304

Query: 240 AILYAMLTMLGVIFLYDQL 258
            I+ A+LT+  V F+ D++
Sbjct: 305 RIMVAVLTIGIVGFILDRI 323


>gi|218440457|ref|YP_002378786.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218173185|gb|ACK71918.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 280

 Score =  168 bits (426), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +G+ IG  P +   + P  Q+L   P   + P+ +
Sbjct: 83  LFWQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLPISL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         +     ++     W I+ N   G    P D++ V+    ++   ++  I+
Sbjct: 143 AAFR----QSDPSAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFNIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       +++L 
Sbjct: 199 IPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILA 252

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+R +
Sbjct: 253 LIYVGVVGLLLDRLV 267



 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 22/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSLP 62
             R++   I  L+ F+++  I+           L  ++ET  P  I            L 
Sbjct: 25  SPRKVVAPIVALVIFLVIWQILCSGENPNLPSPLTVLKETWNPLIINPFYDNGGTDKGLF 84

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ +       L   +  +   L PI  ++++IP L +L  ++  
Sbjct: 85  WQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLPISLAA 144

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        +AIF IF + +W +  +    +  IP+D   VSR  +LS  + F+ 
Sbjct: 145 FRQSDP--------SAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFN 196

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W  +VA+EM+V G       GIG +I  A     L  I+
Sbjct: 197 ILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDAYNSSRLGQII 250

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  V  L D+L+
Sbjct: 251 LALIYVGVVGLLLDRLV 267


>gi|237808527|ref|YP_002892967.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
 gi|237500788|gb|ACQ93381.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
          Length = 312

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 16/221 (7%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            + V    Y            ++  V    ++AS+I IP+GI +G    +   + P  Q+
Sbjct: 84  DFKVTVRPYTGRPTFFDQITTSLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQI 143

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477
           L       + PLV   VS  + + N  ++         +   + W  L N   G +    
Sbjct: 144 LKPISPLAWLPLVTMVVSAVYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDP 203

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D K V+    +      R I+LP   P   TG   + G AW   I +E+ +      +  
Sbjct: 204 DLKNVSRVLKLDPLTHVRKIVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNP 257

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
           GLG ++ +  + G   S   +++ V+ +      L+R +  
Sbjct: 258 GLGKFVWDEFQNGSAQSLARIMVAVVTIGIIGFMLDRGMLQ 298



 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + +  +++ L       +   ++ +   L P++ I++ I  L +L    +    +Y
Sbjct: 105 SLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQILKPISPLAWLPLVTMVVSAVY 164

Query: 128 PGKVIGAELAAI---FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + I   F +    +W    +    + NI  DL+ VSR  +L        + 
Sbjct: 165 SSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDPDLKNVSRVLKLDPLTHVRKIV 224

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 225 LPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAQSLARI 278

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  + F+ D+ + + +  W
Sbjct: 279 MVAVVTIGIIGFMLDRGMLQ-LQKW 302


>gi|86361183|ref|YP_473070.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86285285|gb|ABC94343.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 297

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   ++  QD+  + W   +++ RV     +A++  + VG  IG        + 
Sbjct: 81  SYDLIAYPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +     AL++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F  D+L+
Sbjct: 264 DIIVALAYIGIVGFALDKLV 283


>gi|261250974|ref|ZP_05943548.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260937847|gb|EEX93835.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 322

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+ I IP+GI +G    +     P  QLL  
Sbjct: 97  VKIRPYTGKPTFFDQIVTSLVTVACGFLLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLV 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSRVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLLLDRGMLQ 308



 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 86/205 (41%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +++         +   ++ +     P++ +++ +  L +L    +     Y
Sbjct: 115 SLVTVACGFLLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VSR  +LS WQ    + 
Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++T+  +  L D+ + + +  W
Sbjct: 289 MVAVITIGFIGLLLDRGMLQ-LQKW 312


>gi|254295130|ref|YP_003061153.1| binding-protein-dependent transporters inner membrane component
           [Hirschia baltica ATCC 49814]
 gi|254043661|gb|ACT60456.1| binding-protein-dependent transport systems inner membrane
           component [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 15/215 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    I+A++I  P+GI +G  P +S+   P  Q+   
Sbjct: 149 VRDRDYTGKQTYYQQIWTSLKTVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKP 208

Query: 428 FPANVFFPLVVSCVSYYHLNPN------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
                + P+V   VS             L  ++ +   + W  L N   G ++   D   
Sbjct: 209 VSPLAWLPIVTMVVSATVATDGNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVN 268

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           V     +  W     ++LP   P   TG   + G  W   I +E+ +      +  GLG 
Sbjct: 269 VGKVLKLDAWTKVTKLVLPSALPLIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGK 322

Query: 542 YIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           ++ +  + G   S  ++++ VL +      L+RF+
Sbjct: 323 FVWDEFQNGSSQSLAKIMVAVLTIGIIGFILDRFM 357



 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 82/197 (41%), Gaps = 11/197 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +++ +       +   S  +     PI+ I + +  L +L    +      
Sbjct: 167 SLKTVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATV 226

Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G +  + L +   +    +W    +    + +I +DL  V +  +L  W K   L +
Sbjct: 227 ATDGNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVL 286

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242
           P ++P +   M +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+
Sbjct: 287 PSALPLIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 340

Query: 243 YAMLTMLGVIFLYDQLL 259
            A+LT+  + F+ D+ +
Sbjct: 341 VAVLTIGIIGFILDRFM 357


>gi|116254785|ref|YP_770621.1| putative nitrate transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259433|emb|CAK10571.1| putative nitrate transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 297

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   ++  QD+  + W   I++ RV+    +A++  + VG  IG        + 
Sbjct: 81  SYDLIAYPFFNYGSQDIG-LGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +     AL++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+L    ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F  D+L+
Sbjct: 264 DIIVALAYIGIVGFALDKLV 283


>gi|300866337|ref|ZP_07111039.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506]
 gi|300335664|emb|CBN56199.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506]
          Length = 290

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 16/258 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHS---LPQY 64
            R+I   +  L   +L+  I+    N  L G  +       + I P   +  +   L   
Sbjct: 26  RRKIIRPLVALAVILLIWQILCHDPNSTLPGPLKMISESGNLIINPFFDNGGTDKGLFWQ 85

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     ++ +       L   +  +   L PI  ++++IP L +L  ++  F 
Sbjct: 86  LLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLPISLGAFQ 145

Query: 125 NLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              P + +G    E++A+F I  + +W +  +    +  IP+D   V+R  RL   + FW
Sbjct: 146 QFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQKYFW 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +   + + +   W  +VA+EM+V G       GIG +I  +     L  +
Sbjct: 206 KILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDSYNSSRLSHV 259

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A++ +  V  L D+L+
Sbjct: 260 ILAVIYVGIVGLLLDRLV 277



 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 13/202 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +GI IG    +   + P  Q+L   P   + P+ +
Sbjct: 82  LFWQLLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLPISL 141

Query: 439 SCV-------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
                             +    +++    W I+ N   G    P D++ VA    +   
Sbjct: 142 GAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQ 201

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +++  I+LP   PY  TG     G +W A + +E+   G       G+G +I +S     
Sbjct: 202 KYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSR 255

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+L V+ +    L L+R +
Sbjct: 256 LSHVILAVIYVGIVGLLLDRLV 277


>gi|166364741|ref|YP_001657014.1| bicarbonate transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166087114|dbj|BAG01822.1| bicarbonate transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 276

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 112/260 (43%), Gaps = 26/260 (10%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------H 59
            S+ I P I   L F++V  ++++L  G+ +   P D++        +            
Sbjct: 22  HSQDILPPIIGTLGFLIVWQLVSML--GLIKLPPPSDLITNERTRTYLMYPFFDRGGIDK 79

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+L     + +       +   +  L   L P+   ++++P L ++  +
Sbjct: 80  GLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLS 139

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +       P        AA+F IF + VW +  +    +  IP+D   V +  +LS  + 
Sbjct: 140 LAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKF 191

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A +   + 
Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYIS 246

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  + GV  L D+ +
Sbjct: 247 DIILALFYIGGVGLLLDRFM 266



 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++    A+++ I VGI +G    ++  + P  Q L   P   + PL +
Sbjct: 81  LFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLSL 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 141 AALQ----QNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKFFFKIL 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +     +++L 
Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISDIILA 251

Query: 559 VLIMCCFVLALNRFL 573
           +  +    L L+RF+
Sbjct: 252 LFYIGGVGLLLDRFM 266


>gi|307944732|ref|ZP_07660070.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307771946|gb|EFO31169.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 360

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    Y      I     ++  V +  +IA+II +P+GI  G     +  I P  Q+   
Sbjct: 138 IKQRAYTGKPTYIDQIGTSLKTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  + NP  WLS       + +   + W  L N   G ++   D  
Sbjct: 198 VSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLM 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     +  W+    ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ VL +      L+R ++     + +    
Sbjct: 312 KFVWDEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMFALQRAFTFSANR 360



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +I+ +        +  SR     + P++ I + +  L +L    +     Y
Sbjct: 156 SLKTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215

Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L +   +    +W    +    + ++ +DL  V R  +L  W+    L 
Sbjct: 216 ANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLV 275

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + F+ D+L+F
Sbjct: 330 MVAVLTIGIIGFMLDRLMF 348


>gi|118591229|ref|ZP_01548628.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118436305|gb|EAV42947.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 360

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            Y      I     ++  V +  +IA++I +P+GI  G     +  I P  Q+       
Sbjct: 142 DYTGKPTYIDQIGTSLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPL 201

Query: 432 VFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            + P+V   VS  + +P  WLS       + +   + W  L N   G ++   D   V  
Sbjct: 202 AWLPIVTMIVSATYADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGR 261

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              +  W+    ++LP   P   TG   + G  W   I +E+ +      +  GLG ++ 
Sbjct: 262 VLQLPTWKTVTKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVW 315

Query: 545 ESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           +  + G   S  ++++ VL +      L+R ++     + +    
Sbjct: 316 DEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMFALQRAFTFSANR 360



 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +I+ L        +  SR     + P++ I + +  L +L    +     Y
Sbjct: 156 SLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215

Query: 128 PGKV---IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              V     + L +   +    +W    +    + ++ +DL  V R  +L  W+    L 
Sbjct: 216 ADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTVTKLV 275

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + F+ D+L+F
Sbjct: 330 MVAVLTIGIIGFMLDRLMF 348


>gi|254461331|ref|ZP_05074747.1| nitrate ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677920|gb|EDZ42407.1| nitrate ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 277

 Score =  167 bits (423), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 11/215 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            I  AW+ +          D    I +G  +++RV+V  ++A++I IP+G  IG      
Sbjct: 60  VIAKAWEQLSNPFYDAGPNDKGIGIQIGY-SIYRVLVGYLLAALIAIPLGFLIGMSRVAH 118

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D+  VA +  +   +    +ILP   P  VTG   + G AW   + +E+   G     
Sbjct: 175 REDWVNVARTHELGPLKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TG+G Y+           V+  +L++    + L+
Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 263



 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L   +++ L       L   SR     L P + +++ I  L ++   +    +
Sbjct: 87  GYSIYRVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQD 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  +  D   V+R+  L   +  + + +
Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252

Query: 246 LTMLGVIFLYDQLL 259
           L +  V  L D  L
Sbjct: 253 LMIGVVGMLLDAAL 266


>gi|332140154|ref|YP_004425892.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550176|gb|AEA96894.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 331

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 82/218 (37%), Gaps = 16/218 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y      +            +++ V+V   IAS++ +PVGI  G      + I P  QL 
Sbjct: 104 YEPKIRDFTGAPTFFDQIWTSLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLF 163

Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478
                  + PLV   VS  +++ +       +  +  +     W  L N   G S    D
Sbjct: 164 KPVSPLAWLPLVTMVVSALYVSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKD 223

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              V+    +T       I+LP   P   TG   + G  W   I +E+ +      +  G
Sbjct: 224 LINVSKVLRLTPLAHLTKIVLPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPG 277

Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           LG ++ +  + G   S   +++ VL +      L+R +
Sbjct: 278 LGKFVWDEFQNGSSESLARIMVAVLTIGVIGFVLDRLM 315



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   ++    I+ +       L   S+     + P++ + + +  L +L    +    LY
Sbjct: 124 SLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 183

Query: 128 PGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + + F +    +W    +    + NI +DL  VS+  RL+       + 
Sbjct: 184 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIV 243

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A+LT+  + F+ D+L+   +  + W
Sbjct: 298 MVAVLTIGVIGFVLDRLMLSIQRAVSW 324


>gi|323493097|ref|ZP_08098229.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323312658|gb|EGA65790.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 322

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+ I IP+GI +G          P  QLL  
Sbjct: 97  VKIRPYTGKPTFFDQIVTSLITVASGFLLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKP 156

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 216

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 217 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308



 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 85/205 (41%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + S  +++         +   ++       PI+ +++ +  L +L    +     Y
Sbjct: 115 SLITVASGFLLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 175 VSDDPLFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 234

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++ +  +  L D+ + + +  W
Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ-LQKW 312


>gi|254506550|ref|ZP_05118691.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Vibrio parahaemolyticus 16]
 gi|219550423|gb|EED27407.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Vibrio parahaemolyticus 16]
          Length = 289

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A++I IP+GI +G    +     P  QLL  
Sbjct: 64  VKIRPYTGKPTFFDQIITSLITVASGFLLATVIAIPLGIILGLNQGVYQAFNPVIQLLKP 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +   +       L +   + W  L N   G ++   D  
Sbjct: 124 VSPLAWLPIVTMVVSAIYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 183

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W+  R I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 184 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 237

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575
            ++ +  + G   S   +++ V+ +    L L+R +  
Sbjct: 238 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 275



 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + + S  +++ +       +   ++ +     P++ +++ +  L +L    +    +Y
Sbjct: 82  SLITVASGFLLATVIAIPLGIILGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSAIY 141

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + ++ +DL  VS+  +LS WQ    + 
Sbjct: 142 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 202 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 255

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           + A++ +  +  L D+ + + +  W
Sbjct: 256 MVAVIAIGFIGLLLDRGMLQ-LQKW 279


>gi|114320857|ref|YP_742540.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227251|gb|ABI57050.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 311

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 92/228 (40%), Gaps = 16/228 (7%)

Query: 356 AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            +G  WQ    + +   Y    + + + W    ++ RV+    +A ++ IPVG+ +G   
Sbjct: 89  TVGETWQRAVTLFSDPFYDYGPNDMGIGWQVTYSLGRVLGGFFLALLVGIPVGLMMGTSE 148

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                  P  Q+L       + P+ +        +       ++   + W I+ N  AG 
Sbjct: 149 VCRRAWGPLIQILRPVSPLAWLPIGLLLFRAVDPS----AIFVIFITSIWPIILNTSAGV 204

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            A P D+  V+    +      R I+LP   P+ +TG   + G AW   + +E+ + G  
Sbjct: 205 QAIPRDYMNVSRVLQLNRLEITRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGG-- 262

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHPL 577
                G+G ++ +     +   +++ +L++    +AL+     +   L
Sbjct: 263 ----IGIGFFVWDEWNNLNVASILVAILVIGLVGIALDTVMNLVQRRL 306



 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +    + +  R+L    ++LL       +   S        P++ I++ +  L +L   
Sbjct: 114 GIGWQVTYSLGRVLGGFFLALLVGIPVGLMMGTSEVCRRAWGPLIQILRPVSPLAWLPIG 173

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F  + P        +AIF IF + +W +  +    +  IPRD   VSR  +L+  + 
Sbjct: 174 LLLFRAVDP--------SAIFVIFITSIWPIILNTSAGVQAIPRDYMNVSRVLQLNRLEI 225

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  M +S+   W  +VA+EM+  G       GIG ++       ++ 
Sbjct: 226 TRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGGI------GIGFFVWDEWNNLNVA 279

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           +IL A+L +  V    D ++
Sbjct: 280 SILVAILVIGLVGIALDTVM 299


>gi|307130415|ref|YP_003882431.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306527944|gb|ADM97874.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 528

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 70/528 (13%), Positives = 162/528 (30%), Gaps = 73/528 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L      +  R+   +   +        L   SR L  + +P+ +++  IP L ++ 
Sbjct: 68  PQELAPQLWVSLARLAIGLAGGIALGLTLGVLFGLSRTLDRLGMPLFNVLAQIPTLAWIP 127

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E   +  +  +    +T      +   P+ L E++R+ RL   
Sbjct: 128 LLMLALGIG--------EALKLVVLIKAVTVPVTLCTCAGIRQTPQTLYEMARTLRLPWL 179

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +   L +P  +P ++    ++ S GW  ++A E++   +      G+G  +  + +   
Sbjct: 180 TRLRRLVIPAMLPYVMTGARLAFSQGWVSLIAVELLASSE------GLGYLMVQSRQLFM 233

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           L  +   +L +       +Q L R    W   F              V            
Sbjct: 234 LDLVFVCILAIGAFGLAGEQALQRLERRWI--FWPAPVLSHESPTPRV-----------A 280

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
               +      L   + +L      +   F     ++ +              ++ G++ 
Sbjct: 281 WHALAGWILPALLCLLWQLATDRQWVHTAFLPAPREVVT-------------ALLAGLSS 327

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G    ++                     ++ R +    + + +   +G  +G        
Sbjct: 328 GELTSALS-------------------ASLSRTLAGFALGAALGYLLGGLLGRHRVADRL 368

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L +     + PL+ +              + +     +  L     G    P 
Sbjct: 369 LTPLLSALRSIALFAWLPLLTAWFGLE----ESAKVVFIALAAFFPALLASYQGVRHLPP 424

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A    ++  +  R++ LP + P   +G   +   AW  +I +E            
Sbjct: 425 SLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYF-----IASGN 479

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G+G+ +  + +      V+ GV+++        R +         R L
Sbjct: 480 GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLI-----TLAERRL 522



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 16/231 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              PR++V  +   L    L    S +  R L+   +     ++   L  + R    +L 
Sbjct: 311 LPAPREVVTALLAGLSSGELTSALSASLSRTLAGFALGAALGYLLGGLLGRHRVADRLLT 370

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L  ++SI +  +L     +F      KV+   LAA F    +         YQ + ++
Sbjct: 371 PLLSALRSIALFAWLPLLTAWFGLEESAKVVFIALAAFFPALLAS--------YQGVRHL 422

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RLS  Q+  +L +P  +P L   + +S+   W   + +E  +       
Sbjct: 423 PPSLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYFIASGN--- 479

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             GIGS +  A +      ++  ++ +  V  L+ +L+    R +  W  +
Sbjct: 480 --GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLITLAERRLTAWRFR 528


>gi|90021910|ref|YP_527737.1| 2-isopropylmalate synthase [Saccharophagus degradans 2-40]
 gi|89951510|gb|ABD81525.1| binding-protein-dependent transport systems inner membrane
           component [Saccharophagus degradans 2-40]
          Length = 337

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 19/226 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            Y      +     ++  V +  ++A+I+ +P+GI+ G  P +SS   P  QL       
Sbjct: 118 DYTGAPTYLDQIVTSIKTVFMGFLLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPL 177

Query: 432 VFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + P+V   VS  ++  +        L  ++ +   + W  L N   G ++   D   V 
Sbjct: 178 AWLPIVTMIVSATYVTSDDSWFTKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVG 237

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +  +     ++LP   P   TG   + G  W   I +E+ S      +  GLG ++
Sbjct: 238 KVLQLGWFTKITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFV 291

Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            +  + G   S  ++++ VL +      L+R ++    L+ +G + 
Sbjct: 292 WDEFQNGSSNSLSKIMVAVLTIGVIGFLLDRVMFTLQNLFTFGEKR 337



 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 80/196 (40%), Gaps = 13/196 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130
           +    +++ +           S  +     PI+ + + +  L +L    +     Y    
Sbjct: 136 VFMGFLLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPLAWLPIVTMIVSATYVTSD 195

Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 + L +   +    +W    +    + +I +DL  V +  +L  + K   L +P 
Sbjct: 196 DSWFTKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPS 255

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYA 244
           S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A
Sbjct: 256 SLPLIFTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFVWDEFQNGSSNSLSKIMVA 309

Query: 245 MLTMLGVIFLYDQLLF 260
           +LT+  + FL D+++F
Sbjct: 310 VLTIGVIGFLLDRVMF 325


>gi|282898754|ref|ZP_06306741.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281196281|gb|EFA71191.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 283

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 25/259 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDVHSL 61
           F+  ++ P +  L+ F+++  ++  +        L    ET  P  I            L
Sbjct: 24  FLVHKVLPPLCGLVIFLMLWQLLCSIPGFQLPGPLETFVETWDPFIIKPFFDNGDSDKGL 83

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R+     ++ +       L   +R L   + PI  ++++IP L +L  ++ 
Sbjct: 84  GWQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISLA 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F    P        +AIF IF + +W +  +    + NIP+D   V+R  RL   + F 
Sbjct: 144 AFQQANP--------SAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFL 195

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238
            +  P ++P +   + + +   W  +VA+EM+V G       GIGS+I  A     + +L
Sbjct: 196 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTDTNL 249

Query: 239 LAILYAMLTMLGVIFLYDQ 257
             I+ A++ +  V  + D+
Sbjct: 250 SEIIIALIYVGIVGLMLDR 268



 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ + +GI IG    + + + P  Q+L   P   + P+ +
Sbjct: 83  LGWQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         N     ++   + W IL N   G    P D+  VA    +   +++  I+
Sbjct: 143 AAFQ----QANPSAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555
            P   PY  TG     G +W A + +E+   G       G+G++I ++   T   +  E+
Sbjct: 199 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTDTNLSEI 252

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ ++ +    L L+R +
Sbjct: 253 IIALIYVGIVGLMLDRTV 270


>gi|119477165|ref|ZP_01617401.1| possible nitrate transport system permease protein [marine gamma
           proteobacterium HTCC2143]
 gi|119449528|gb|EAW30766.1| possible nitrate transport system permease protein [marine gamma
           proteobacterium HTCC2143]
          Length = 276

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  AW+ +          D    I L   +++RV+   + A+++ IP+G  IG  P + 
Sbjct: 59  VLAHAWKELSNPFYDAGPNDKGIGIQL-AYSLYRVITGFVAAALVAIPLGFVIGMSPLMH 117

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 118 RALNPFIQVLRPISPLAWMPLALFVIR----DSEQSAIFVIFICSIWPMLINTAFGVANV 173

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
            +D+  VA +  ++  +    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 174 RSDWVNVARTHELSQLQTAFQVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 228

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            TG+G Y+           V+  +L++    + L+  L
Sbjct: 229 -TGIGYYVWNEWNNLDLNSVIFSILMIGIIGMLLDMAL 265



 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 19/226 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +L H  +E + P          + +       + +  R+++  V + L       +   S
Sbjct: 59  VLAHAWKELSNPFYDAGPNDKGIGIQ-----LAYSLYRVITGFVAAALVAIPLGFVIGMS 113

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             +   L P + +++ I  L ++   +    +        +E +AIF IF   +W M  +
Sbjct: 114 PLMHRALNPFIQVLRPISPLAWMPLALFVIRD--------SEQSAIFVIFICSIWPMLIN 165

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               + N+  D   V+R+  LS  Q  + + +P + P ++  M +S+   W  +VA+EM+
Sbjct: 166 TAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAPTILTGMRISIGIAWLVIVAAEML 225

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V G       GIG Y+       DL ++++++L +  +  L D  L
Sbjct: 226 VGGT------GIGYYVWNEWNNLDLNSVIFSILMIGIIGMLLDMAL 265


>gi|307823608|ref|ZP_07653837.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
 gi|307735593|gb|EFO06441.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
          Length = 338

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 17/201 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++ V    +IA++I +P+G++ G  P  +S I P  Q+        + P+V   VS 
Sbjct: 131 FTSLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPLAWLPIVTLVVSA 190

Query: 444 YHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            ++  +        L  ++ +   + W  L N   G S+   D   V     ++     +
Sbjct: 191 VYVTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVGKVLRLSWSTQIK 250

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SF 552
            IILP   PY  TG   + G  W   I +E+ +      +  GLG ++ +  + G   S 
Sbjct: 251 KIILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSL 304

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             +++ V  +     AL+R +
Sbjct: 305 GRIMVAVFTIGLIGFALDRIM 325



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 80/199 (40%), Gaps = 13/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   + +  VI+ L           S      + P++ I + +  L +L    +    +Y
Sbjct: 133 SLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPLAWLPIVTLVVSAVY 192

Query: 128 ----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     + L +   +    +W    +    + +I +DL  V +  RLS   +   +
Sbjct: 193 VTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVGKVLRLSWSTQIKKI 252

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLA 240
            +P ++P +   M +S+  GW  ++A+EM+         PG+G ++    +      L  
Sbjct: 253 ILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGR 306

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+ A+ T+  + F  D+++
Sbjct: 307 IMVAVFTIGLIGFALDRIM 325


>gi|146284405|ref|YP_001174558.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572610|gb|ABP81716.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri
           A1501]
          Length = 263

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            I   W+ I          DV  + W    ++ RV V  ++A +  + +G+ IG      
Sbjct: 43  VIAETWELIVDPFYDNGGNDVG-LAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAM 101

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P  Q+L   P   + PL ++     H +       ++     W I+ N   G    
Sbjct: 102 RGLDPIFQVLRTVPPLAWLPLSLAGFQDSHPS----ALFVIFITAIWPIIINTAVGIRNI 157

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D++ VA    + G+ +++ I+LP   PY  TG     G +W A I +E+   G     
Sbjct: 158 PQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG----- 212

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I ++       +++L ++ +      L+R +
Sbjct: 213 -VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 249



 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+    +++++       L  +S      L PI  +++++P L +L  +
Sbjct: 64  GLAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLS 123

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F + +P        +A+F IF + +W +  +    + NIP+D   V++  +L+G++ 
Sbjct: 124 LAGFQDSHP--------SALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEY 175

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P + P +   + + +   W  ++A+EM++ G       GIG +I  A     + 
Sbjct: 176 FKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNASRIS 229

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F+ D+L+
Sbjct: 230 DIILALVYIGVVGFVLDRLV 249


>gi|241554242|ref|YP_002979455.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863548|gb|ACS61210.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 297

 Score =  165 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   ++  QD+  + W   I++ RV+    +A++  + +G  IG        + 
Sbjct: 81  SYDLIAYPFFNYGSQDIG-LGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +     AL++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+L    ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F  D+L+
Sbjct: 264 DIIVALAYIGIVGFALDKLV 283


>gi|109898731|ref|YP_661986.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
 gi|109701012|gb|ABG40932.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
          Length = 329

 Score =  165 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 16/219 (7%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y      +            +++ V V  +IAS+I +P+GI  G      + I P  QL
Sbjct: 101 SYSPTIRAFTGAPTFFDQIWTSLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQL 160

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPN 477
           L       + PLV   VS  +++ +       +  ++ +     W  L N   G S+  +
Sbjct: 161 LKPVSPLAWLPLVTMVVSAVYISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDS 220

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D   V+    +  +     I++P   P   TG   + G  W   I +E+ +      +  
Sbjct: 221 DLINVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNP 274

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           GLG ++ +  + G   S   +++ VL +     AL+R +
Sbjct: 275 GLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLM 313



 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +I+ +       L   S+     + P++ +++ +  L +L    +    +Y
Sbjct: 122 SLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181

Query: 128 PG---KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + +   +    +W    +    + +I  DL  VS+  RL  +     + 
Sbjct: 182 ISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIV 241

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + F  D+L+ 
Sbjct: 296 MVAVLTIGLIGFALDRLML 314


>gi|192362345|ref|YP_001981051.1| nitrate ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190688510|gb|ACE86188.1| nitrate ABC transporter permease protein [Cellvibrio japonicus
           Ueda107]
          Length = 291

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W    ++ RV V   +A I  + +GI +G        + P  Q+L   P   + PL ++ 
Sbjct: 95  WQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPLSLAG 154

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               H +       ++   + W I+ N   G    P D++ VA    + GW+++  I+LP
Sbjct: 155 FQDSHPS----AIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQYFYKIMLP 210

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY  +G     G +W A + +E+   G       G+G +I ++       +++L ++
Sbjct: 211 AAAPYIFSGLRIGVGLSWLAIVAAEMLVGG------VGIGFFIWDAWNSSRISDIILALI 264

Query: 561 IMCCFVLALNRFL 573
            +     AL+R +
Sbjct: 265 YVGLVGFALDRLV 277



 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++++       L  +S      L PI  +++++P L +L  +
Sbjct: 92  GMGWQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPLS 151

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F + +P        +AIF IF + +W +  +    + NIP D   V+R  +L GWQ 
Sbjct: 152 LAGFQDSHP--------SAIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQY 203

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +P + P +   + + +   W  +VA+EM+V G       GIG +I  A     + 
Sbjct: 204 FYKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLVGGV------GIGFFIWDAWNSSRIS 257

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F  D+L+
Sbjct: 258 DIILALIYVGLVGFALDRLV 277


>gi|254426861|ref|ZP_05040568.1| ABC transporter, permease protein [Alcanivorax sp. DG881]
 gi|196193030|gb|EDX87989.1| ABC transporter, permease protein [Alcanivorax sp. DG881]
          Length = 333

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 16/214 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H  Y            ++  V+   ++AS+I IP+GI+IG      + + P  QL     
Sbjct: 110 HRDYTGAPTFFDQIGTSLITVMSGFLLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVS 169

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEV 482
              + PLV   VS  ++  +  ++         +     W  L N   G ++   D   V
Sbjct: 170 PLAWLPLVTMVVSAVYVTDDPLVAKSFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNV 229

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           +    +      R I+LP   P   TG   + G AW   I +E+ +      +  GLG +
Sbjct: 230 SKVLRLNALSHVRKIVLPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKF 283

Query: 543 IAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           + +  + G   S   +++ V+++      L+R +
Sbjct: 284 VWDEFQNGSSQSLGRIMVAVIVIGLIGFLLDRLM 317



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + ++S  +++ +           S      + P++ + + +  L +L    +    +Y
Sbjct: 126 SLITVMSGFLLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVSPLAWLPLVTMVVSAVY 185

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V  + L ++F +    +W    +    + ++ +DL  VS+  RL+       + 
Sbjct: 186 VTDDPLVAKSFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIV 245

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 246 LPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 299

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A++ +  + FL D+L+ 
Sbjct: 300 MVAVIVIGLIGFLLDRLML 318


>gi|89092993|ref|ZP_01165944.1| putative nitrate transporter [Oceanospirillum sp. MED92]
 gi|89082643|gb|EAR61864.1| putative nitrate transporter [Oceanospirillum sp. MED92]
          Length = 328

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    Y            ++  V+   ++AS+I IP GI IG    + S   P  QL   
Sbjct: 103 IKVRPYTGKPTFFDQIGTSLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKP 162

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +       +   + +     W  L N   G S    D +
Sbjct: 163 VSPLAWLPLVTMVVSAVYVSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQ 222

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++       I+LP   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 223 NVSQVLRLSWLAHVTKIVLPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 276

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ VL++      L+R +
Sbjct: 277 KFVWDEFQNGSSSSLGRIMVAVLVIGLIGFLLDRVM 312



 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +L+  V++ L       +   ++ L     P++ + + +  L +L    +    +Y
Sbjct: 121 SLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKPVSPLAWLPLVTMVVSAVY 180

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             K      + + ++  +    +W    +    +  I +DL+ VS+  RLS       + 
Sbjct: 181 VSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIV 240

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 241 LPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLGRI 294

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+L +  + FL D+++ 
Sbjct: 295 MVAVLVIGLIGFLLDRVML 313


>gi|124268670|ref|YP_001022674.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124261445|gb|ABM96439.1| nitrate ABC transporter permease protein [Methylibium
           petroleiphilum PM1]
          Length = 295

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ RV +   +A+++ IP+G  IG  P +   + PF Q+L       + PL +
Sbjct: 100 IGLQLAYSLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLAL 159

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     + ++    ++   + W +L N   G +    ++  VA +  ++  R    +I
Sbjct: 160 YTIK----DSSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVI 215

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   + G AW   + +E+   G      TG+G ++       S   V+  
Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLTNVIFA 269

Query: 559 VLIMCCFVLALNRFLWH 575
           +L++    + L+     
Sbjct: 270 ILVIGVVGMLLDLLFAR 286



 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     ++ L       L   S  +   L P + +++ I  L ++   +    
Sbjct: 104 LAYSLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLALY--- 160

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + ++ IF IF   VW M  +    +  + R+   V+R+  +S  +K + + 
Sbjct: 161 -----TIKDSSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVI 215

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L  +++A
Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFA 269

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  L D L  R
Sbjct: 270 ILVIGVVGMLLDLLFAR 286


>gi|159185941|ref|NP_356730.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium
           tumefaciens str. C58]
 gi|159141075|gb|AAK89515.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium
           tumefaciens str. C58]
          Length = 297

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + +     +++ RV     +A+I  I +G  IG        + P  Q+L   P   +
Sbjct: 94  SQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAW 153

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL ++       + N     ++   + W ++ N   G    P D++ VA    +    +
Sbjct: 154 LPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEF 209

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++      P
Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 263

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++++ +  +      L++ +
Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283



 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V++  RL+  + 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F+ D+L+
Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283


>gi|190895012|ref|YP_001985305.1| nitrate ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700673|gb|ACE94755.1| nitrate ABC transporter, permease protein [Rhizobium etli CIAT 652]
 gi|327194336|gb|EGE61196.1| nitrate ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 297

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I +   ++  QD+  + W   +++ RV     +A++  + VG  IG        + 
Sbjct: 81  SYDLIAFPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +    ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +     AL++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283



 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQLEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F  D+L+
Sbjct: 264 DIIVALAYIGIVGFALDKLV 283


>gi|307153749|ref|YP_003889133.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306983977|gb|ADN15858.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 280

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+++ I VG+ IG  P +   + P  Q+L   P   + P+ +
Sbjct: 83  LFWQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLPISL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         +     ++     W I+ N   G    P D++ V+    ++   ++  I+
Sbjct: 143 AAFR----QSDPSAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFNIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       +++L 
Sbjct: 199 IPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILA 252

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+R +
Sbjct: 253 LIYVGVVGLLLDRMV 267



 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSLP 62
             R+I   I  L  F+ +  I+           L  ++ET  P  I            L 
Sbjct: 25  SPRKIIAPIIALGIFLTIWQILCSGENPNLPSPLTVLKETWNPLIINPFYDNGGTDKGLF 84

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       L   S  +   L PI  ++++IP L +L  ++  
Sbjct: 85  WQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLPISLAA 144

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        +AIF IF + +W +  +    +  IP+D   VSR  +LS  + F+ 
Sbjct: 145 FRQSDP--------SAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFN 196

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W  +VA+EM+V G       GIG +I  A     L  I+
Sbjct: 197 ILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDAYNSSRLGQII 250

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  V  L D+++
Sbjct: 251 LALIYVGVVGLLLDRMV 267


>gi|307131761|ref|YP_003883777.1| Nitrate ABC transporter permease [Dickeya dadantii 3937]
 gi|306529290|gb|ADM99220.1| Nitrate ABC transporter, permease protein [Dickeya dadantii 3937]
          Length = 325

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 21/282 (7%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R +   +     P +  V        + R  +     Q  S      +  I    V    
Sbjct: 35  RAVATDATVIALPETAGVAAPTPAAVLPRAVWRPRLSQWLSRLLPGGVGMILLLAVWQVA 94

Query: 356 AI--------GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           A+           W +   I     Y    +   + W    ++ RV +   +A+++ IP 
Sbjct: 95  ALSSKGFPTPWQTWLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPA 154

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G  IG    +++   P   LL       + P+ +          +      +   + W +
Sbjct: 155 GFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPM 210

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + N   G    P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +
Sbjct: 211 ILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAA 270

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           E+ + G       G+G +I       + P +++ +L++    
Sbjct: 271 EMLTGG------IGIGFWIWNEWNNLNVPNIIIAILVIGVVG 306



 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 99/245 (40%), Gaps = 20/245 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITL---DVHSLPQYASR 67
           R+ P    ++  + V  +  +   G     +T +    +   P  +   +   +      
Sbjct: 76  RLLPGGVGMILLLAVWQVAALSSKGFPTPWQTWLAAQSIFADPFYVAGPNDQGIGWNVLA 135

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     ++ L       L  + R +  +  PI+ +++ +  L +L   ++ F    
Sbjct: 136 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAE 195

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS +     + +P 
Sbjct: 196 P--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPA 247

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  I+ A+L 
Sbjct: 248 VLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNLNVPNIIIAILV 301

Query: 248 MLGVI 252
           +  V 
Sbjct: 302 IGVVG 306


>gi|159044213|ref|YP_001533007.1| putative ABC transporter permease [Dinoroseobacter shibae DFL 12]
 gi|157911973|gb|ABV93406.1| putative ABC transporter permease protein [Dinoroseobacter shibae
           DFL 12]
          Length = 360

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 86/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+++ +P+GI  G     ++ + P  Q+   
Sbjct: 138 VKDIAYTGAPSYYDQIWTSIQTVFFGFLVATVVAVPLGISAGLSVTANAALNPIIQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   +       L  ++ +   + W  L N   G S+   D  
Sbjct: 198 VSPLAWLPIVTMVVSAVYTTNDGLFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVSKVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ VL +      L+R ++    L+ +    
Sbjct: 312 KFVWDEFQNGSSDSLARIMVAVLTIGIIGFLLDRLMFTIQSLFTFTNNR 360



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +++ +        A  S      L PI+ I + +  L +L    +    +Y
Sbjct: 156 SIQTVFFGFLVATVVAVPLGISAGLSVTANAALNPIIQIFKPVSPLAWLPIVTMVVSAVY 215

Query: 128 P---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G    + L +   +    +W    +    + +I +DL  VS+  +++ + K   L 
Sbjct: 216 TTNDGLFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLV 275

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 276 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARI 329

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + FL D+L+F
Sbjct: 330 MVAVLTIGIIGFLLDRLMF 348


>gi|209526508|ref|ZP_03275034.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
 gi|209493014|gb|EDZ93343.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
          Length = 410

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63
            +++ P+   +L F++V  +   +        + R + +   + +D           L  
Sbjct: 159 GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 217

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++++       L   +  +   L PI  I+++IP L +L  ++  F
Sbjct: 218 QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 277

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        +AIF IF + +W +  +  + +  IP+D   VSR  RL     F+ +
Sbjct: 278 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 329

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P +   + + +   W  ++A+EM++ G       GIG +I  A     +  I+ 
Sbjct: 330 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 383

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  V  L D+ +
Sbjct: 384 AVIYVGVVGLLLDKFI 399



 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 112/306 (36%), Gaps = 25/306 (8%)

Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR--V 340
           S ++ L   +       Y     FSP         R     +F        + +  +  +
Sbjct: 104 SAIVALSGNSRINVASMYQFPVPFSPHEPMTSPTYRRRHKFQFSPQRWLKAVLNKGKKLI 163

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-------------IWLGCITM 387
              + I  F VV  V   ++  ++   +   +    L +              W    ++
Sbjct: 164 PSAVAILIFLVVWEVFTAVSDSTLPGPIRTVSETWELIIDPFFDHGGIDKGLFWQILTSL 223

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            RV +   +A ++ + +G+ IG    +   + P  Q+L   P   + P  +S   +   N
Sbjct: 224 QRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERAN 281

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           P+     ++     W I+ N   G    P D+  V+    +    ++  I+ P   PY  
Sbjct: 282 PS--AIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIF 339

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG     G +W A I +E+   G       G+G +I ++       +++L V+ +    L
Sbjct: 340 TGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGL 393

Query: 568 ALNRFL 573
            L++F+
Sbjct: 394 LLDKFI 399


>gi|209546549|ref|YP_002278467.1| nitrate ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537793|gb|ACI57727.1| nitrate ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 297

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   +   QD+  + W   +++ RV+    +A++  + +G  IG        + 
Sbjct: 81  SYDLIAYPFFNNGSQDIG-LGWRVLVSLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +      L++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283



 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+L    ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 98  GLGWRVLVSLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ 
Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F+ D+L+
Sbjct: 264 DIIVALAYIGIVGFVLDKLV 283


>gi|75909859|ref|YP_324155.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75703584|gb|ABA23260.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 273

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
             WL   ++ RVVV  ++A++I IP+G  I         I P  QLL       + PL  
Sbjct: 78  FFWLILASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQ 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      L PN     ++     W I+ N   G    P D++ V+    ++    +  I+
Sbjct: 138 AVF----LKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKIL 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  TG   A G +W A + +E+       L   G+G +I ++    +  E++L 
Sbjct: 194 LPATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILA 247

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L++ +
Sbjct: 248 IVYLGAVGLVLDKIM 262



 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 88/194 (45%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R++   +++ L       + + +      + P++ +++ +  L +L      F+ 
Sbjct: 83  LASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAVFLK 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF I  + +W +  +    +  +P+D   VS+   LS  + F+ + +
Sbjct: 143 PNP--------SAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKILL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +++   W  VVA+EM+      +   GIG +I  A    ++  ++ A+
Sbjct: 195 PATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAI 248

Query: 246 LTMLGVIFLYDQLL 259
           + +  V  + D+++
Sbjct: 249 VYLGAVGLVLDKIM 262


>gi|90419876|ref|ZP_01227785.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport
           system [Aurantimonas manganoxydans SI85-9A1]
 gi|90335917|gb|EAS49665.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport
           system [Aurantimonas manganoxydans SI85-9A1]
          Length = 364

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V   +Y            ++  V +  ++A+II IPVGI  G    I+  + P  Q+   
Sbjct: 142 VKTRSYTGAPTYPEQILTSLKTVFLGFVLATIIAIPVGIACGLSATINGALNPLIQIFKP 201

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  ++N +       +  ++ +   + W  L N   G ++   D  
Sbjct: 202 VSPLAWLPIVTMIVSALYVNASDAVPKSMVVSAITVTLCSLWPTLINTALGVASIDKDLV 261

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     +   +    ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 262 NVGKVLQLPTHKTITKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 315

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ V+ +      L+R +
Sbjct: 316 KFVWDEFQNGSSDSLARIIVAVITIGIVGFMLDRIM 351



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P+    +   +    V++ +           S  +   L P++ I + +  L +L    +
Sbjct: 154 PEQILTSLKTVFLGFVLATIIAIPVGIACGLSATINGALNPLIQIFKPVSPLAWLPIVTM 213

Query: 122 YFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               LY      V  + + +   +    +W    +    + +I +DL  V +  +L   +
Sbjct: 214 IVSALYVNASDAVPKSMVVSAITVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLPTHK 273

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ-- 236
               L +P +MP +   + +S+  GW  ++A+EM+         PG+G ++    +    
Sbjct: 274 TITKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSS 327

Query: 237 -DLLAILYAMLTMLGVIFLYDQLL 259
             L  I+ A++T+  V F+ D+++
Sbjct: 328 DSLARIIVAVITIGIVGFMLDRIM 351


>gi|291612628|ref|YP_003522785.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
 gi|291582740|gb|ADE10398.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
          Length = 333

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +   Y      +     +++ V V   + +II +P+GI  G    I + + P  Q+   
Sbjct: 110 FDEIKYTGQPTYLDQIFTSLYTVFVGFFLGTIIAVPLGILCGLNKTIQAALNPLIQIFRP 169

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +       L  ++ +   + W  L N   G ++   D  
Sbjct: 170 VSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTALGVASIDKDLL 229

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++       I++P       TG   + G AW   I +E+ +      +  GLG
Sbjct: 230 NVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA------QNPGLG 283

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ V  +      L+R +
Sbjct: 284 KFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDRTM 319



 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 13/223 (5%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           + T P    D +  T     L Q    +   +     +  +       L   ++ +   L
Sbjct: 102 QATNPGQQFDEIKYTGQPTYLDQ-IFTSLYTVFVGFFLGTIIAVPLGILCGLNKTIQAAL 160

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            P++ I + +  L +L    +    LY         + L +   +    +W    +    
Sbjct: 161 NPLIQIFRPVSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTALG 220

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +I +DL  VS+  RLS   K   + +P S+  +   M +S+   W  ++A+EM+    
Sbjct: 221 VASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA--- 277

Query: 218 TVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ 257
                PG+G ++    +    Q L  I+ A+ T+  V FL D+
Sbjct: 278 ---QNPGLGKFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDR 317


>gi|116053906|ref|YP_788343.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296386674|ref|ZP_06876173.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|115589127|gb|ABJ15142.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 538

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/538 (14%), Positives = 160/538 (29%), Gaps = 71/538 (13%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
               +     ++V      L    L    + +  R+   ++  +            S R 
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRA 115

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             ++ P    +  IP L ++   +++F           EL  +  +  + V  +T     
Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +    L E +   RL      W L +P ++P  +  + ++++ GW  ++A E++   
Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +      GIG  +    +   L  +   +L +  V    D+ +      W ++       
Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI-----QWLDR------- 269

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                                               +       G  R   P    Q   
Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394
                  L + W        +  A  +    V   T+   L     G +  ++ R +  +
Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++   +    G+ +G          P    L       + PL+ +               
Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     + +L     G ++ P    E A    +  WR    ++LPG  P    G   A 
Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             AW  +I +E            G+G+ +  + +      +  G+L++      LN  
Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 17/226 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W          + WQS   ++    + ++        I++ R+   ++        +G W
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGVASGAALGAW 108

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +GF P     + P    LA  P   + PL +       L   + L   ++         +
Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G        +E A+   +        +ILP   P ++TG   A    W + +  E+ 
Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       + G+G  + +  +      V + +L++    + ++R +
Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI 264



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++           SLP     +  R L  +++     F+   L    R       
Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    ++ + I  ++     +F    P K+    +AA F         +  +  + + ++
Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL  W++   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I   ML +     L +  L + +   + ++R
Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536


>gi|126729376|ref|ZP_01745190.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126710366|gb|EBA09418.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 360

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    ++A+++ +P+GI  G  P  ++ I P  Q+   
Sbjct: 138 VKDVAYTGAPSYYQQIWTSIQTVFFGFVLATLVAVPLGILAGLSPTANAAINPLVQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS    N         +  ++ +   + W  L N   G ++   D  
Sbjct: 198 VSPLAWLPIVTMIVSAAAANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLV 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  W     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ V  +      L+R ++    L+ +  + 
Sbjct: 312 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMYALQSLFTFTNQR 360



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 83/198 (41%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    V++ L       LA  S      + P++ I + +  L +L    +      
Sbjct: 156 SIQTVFFGFVLATLVAVPLGILAGLSPTANAAINPLVQIFKPVSPLAWLPIVTMIVSAAA 215

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G    + + +   +    +W    +    + +I +DL  VS+  +++ W K   L 
Sbjct: 216 ANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLV 275

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 276 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKI 329

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A+ T+  + FL D+++
Sbjct: 330 MVAVFTIGIIGFLLDRVM 347


>gi|88798426|ref|ZP_01114011.1| nitrate transporter system, permease component [Reinekea sp.
           MED297]
 gi|88778866|gb|EAR10056.1| nitrate transporter system, permease component [Reinekea sp.
           MED297]
          Length = 328

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y V    +      I     ++  V+   ++AS I IP+GI IG    +     P  Q+L
Sbjct: 101 YEVRIRDFNGRPTFISQIGTSLITVLSGFLLASAIAIPLGILIGLNQFVYMAANPIIQVL 160

Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478
                  + PLV   VS  +++ +       +   + +   + W  L N   G ++  +D
Sbjct: 161 KPVSPLAWLPLVTIVVSAVYVSDDPMFEKSFVTSVITVTLCSLWPTLLNTAVGVASIESD 220

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           F  ++    +      R I+LP   P   TG   + G AW   I +E+ +      +  G
Sbjct: 221 FNNISRVLKLKSLTHVRKIVLPASVPMIFTGLRLSIGIAWMVLIAAEMLA------QNPG 274

Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           LG ++ +  + G   S   ++  VL++      L+R +
Sbjct: 275 LGKFVWDEFQNGSSESLSRILAAVLVIGLVGFLLDRAM 312



 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +LS  +++         L   ++ + M   PI+ +++ +  L +L    +    +Y
Sbjct: 121 SLITVLSGFLLASAIAIPLGILIGLNQFVYMAANPIIQVLKPVSPLAWLPLVTIVVSAVY 180

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + ++  +    +W    +    + +I  D   +SR  +L        + 
Sbjct: 181 VSDDPMFEKSFVTSVITVTLCSLWPTLLNTAVGVASIESDFNNISRVLKLKSLTHVRKIV 240

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 241 LPASVPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLSRI 294

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           L A+L +  V FL D+ + 
Sbjct: 295 LAAVLVIGLVGFLLDRAML 313


>gi|75907249|ref|YP_321545.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75700974|gb|ABA20650.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 279

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 10/214 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  I Y        D   + W    ++ RV +   +A+++ + +G+ IG    +S  + 
Sbjct: 63  TWILILYPFYDKGGTDKG-LFWQILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALD 121

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  QLL   P   + P+ ++ +             ++     W IL N   G +  P D+
Sbjct: 122 PIFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITAIWPILINTAVGVTQIPQDY 177

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA    ++   ++  I++P   PY  TG   A G AW A I +E+   G +     G+
Sbjct: 178 NNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GI 232

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++ +  +  EV+L ++ +    L L++ +
Sbjct: 233 GFFIWDAYQNNNVSEVILALVYIGVVGLILDKLM 266



 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 110/255 (43%), Gaps = 24/255 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQY 64
            +FP    ++ F+++  + +           P  ++    I +             L   
Sbjct: 27  DLFPPAIAIVIFLVIWQLFSWTPGAT--LPGPVQVIQDTWILILYPFYDKGGTDKGLFWQ 84

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+  +  ++ +       L   ++ +   L PI  +++++P L ++  ++    
Sbjct: 85  ILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALDPIFQLLRTVPPLAWVPISLAALR 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+F IF + +W +  +    +  IP+D   V++  +LS  + F  + 
Sbjct: 145 QNEP--------AALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A +  ++  ++ A
Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNNVSEVILA 251

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  V  + D+L+
Sbjct: 252 LVYIGVVGLILDKLM 266


>gi|254241178|ref|ZP_04934500.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192]
 gi|126194556|gb|EAZ58619.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192]
          Length = 283

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  +IA  + IP+G  IG  P +   + PF Q+L       + P+ +  +    
Sbjct: 95  SLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPISPLAWMPIALYTIR--- 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            + ++    ++   + W +L N   G +    D+  VA +  ++  R    +ILP   P 
Sbjct: 152 -DSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVILPAAAPT 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+   G      TG+G ++       S   V+  VL++   
Sbjct: 211 IITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSLANVIFAVLMIGVI 264

Query: 566 VLALNRFL 573
            + L+   
Sbjct: 265 GMLLDLLF 272



 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+    +I+L        +   S  L   L P + +++ I  L ++   +    
Sbjct: 92  LAHSLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPISPLAWMPIALY--- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + ++A+F IF   +W M  +    +  + +D   V+R+  +S  +K + + 
Sbjct: 149 -----TIRDSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVI 203

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM++ G       GIG ++        L  +++A
Sbjct: 204 LPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSLANVIFA 257

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  +  L D L  +
Sbjct: 258 VLMIGVIGMLLDLLFAQ 274


>gi|22299544|ref|NP_682791.1| bicarbonate transport system permease protein [Thermosynechococcus
           elongatus BP-1]
 gi|22295727|dbj|BAC09553.1| bicarbonate transport system permease protein [Thermosynechococcus
           elongatus BP-1]
          Length = 324

 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I++ RV     +A+++ I +GI +G    ++  + P  Q L       + P+ +
Sbjct: 127 LARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWVPISL 186

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++   + W IL N   G    P D+K V+    ++   ++  I+
Sbjct: 187 AALR----QNEPAAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQTFFLKIL 242

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G AW A I +E+   G       G+G +I ++ ++    E+++ 
Sbjct: 243 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYVTEIIVA 297

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 298 VVYIGAIGLILDRLV 312



 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    +  R+     ++ +       L   S+ L   L PI   ++ +  L ++  
Sbjct: 125 QGLARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWVPI 184

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++       P        AAIF IF + +W +  +    +  IP+D + VSR  RLS   
Sbjct: 185 SLAALRQNEP--------AAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQT 236

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +
Sbjct: 237 FFLKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYV 291

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  +  + D+L+
Sbjct: 292 TEIIVAVVYIGAIGLILDRLV 312


>gi|15595383|ref|NP_248875.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107099174|ref|ZP_01363092.1| hypothetical protein PaerPA_01000184 [Pseudomonas aeruginosa PACS2]
 gi|218888930|ref|YP_002437794.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237577|ref|ZP_04930900.1| hypothetical protein PACG_03658 [Pseudomonas aeruginosa C3719]
 gi|254243294|ref|ZP_04936616.1| hypothetical protein PA2G_04102 [Pseudomonas aeruginosa 2192]
 gi|9946019|gb|AAG03575.1|AE004456_6 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126169508|gb|EAZ55019.1| hypothetical protein PACG_03658 [Pseudomonas aeruginosa C3719]
 gi|126196672|gb|EAZ60735.1| hypothetical protein PA2G_04102 [Pseudomonas aeruginosa 2192]
 gi|218769153|emb|CAW24913.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 538

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/538 (14%), Positives = 160/538 (29%), Gaps = 71/538 (13%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
               +     ++V      L    L    + +  R+   ++  +            S R 
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRA 115

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             ++ P    +  IP L ++   +++F           EL  +  +  + V  +T     
Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +    L E +   RL      W L +P ++P  +  + ++++ GW  ++A E++   
Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +      GIG  +    +   L  +   +L +  V    D+ +      W ++       
Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI-----QWLDR------- 269

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                                               +       G  R   P    Q   
Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394
                  L + W        +  A  +    V   T+   L     G +  ++ R +  +
Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++   +    G+ +G          P    L       + PL+ +               
Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     + +L     G ++ P    E A    +  WR    ++LPG  P    G   A 
Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             AW  +I +E            G+G+ +  + +      +  G+L++      LN  
Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 80/226 (35%), Gaps = 17/226 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W          + WQS   ++    + ++        I++ R+   ++        +G W
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGVASGAALGAW 108

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +GF P     + P    LA  P   + PL +       L   + L   ++         +
Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G        +E A+   +        +ILP   P ++TG   A    W + +  E+ 
Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       + G+G  + +  +      V + +LI+    + ++R +
Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI 264



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++           SLP     +  R L  +++     F+   L    R       
Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    ++ + I  ++     +F    P K+    +AA F         +  +  + + ++
Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL  W++   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I   ML +     L +  L + +   + ++R
Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536


>gi|257060406|ref|YP_003138294.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|256590572|gb|ACV01459.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 280

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++   +A+I+ I  GI++G     +  + P  Q L   P   + P+ +
Sbjct: 84  LFWQSVASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 AALQ----QNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     +++L 
Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+RF+
Sbjct: 255 LVYIGAIGLMLDRFM 269



 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 109/259 (42%), Gaps = 26/259 (10%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-----------VDIVPITLDVHS 60
           S+ I P I  ++ F++V  + +++  G+ +   P D+                       
Sbjct: 26  SQNILPPIVGIVGFLVVWQLCSMI--GLIKLPPPSDLWFNERTRIYLMYPFFNRGGTDVG 83

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   +  +  R+L    ++ +           +      L P+   ++++P L ++   +
Sbjct: 84  LFWQSVASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                  P        AA+F IF + VW +  +    +  IP+D   V +  +LS  + F
Sbjct: 144 AALQQNQP--------AALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFF 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  + +   +  
Sbjct: 196 FKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISD 250

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+ A++ +  +  + D+ +
Sbjct: 251 IILALVYIGAIGLMLDRFM 269


>gi|299133917|ref|ZP_07027111.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2]
 gi|298591753|gb|EFI51954.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2]
          Length = 299

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           RI P +  L  F++V  ++           +     D   +  D           L  + 
Sbjct: 47  RIVPPLIVLALFLVVWELLCSKAGATLPPPLKV-FRDTKDLIFDPFFDNGGIDKGLFWHL 105

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S +  R+     ++ +      TL  +S      L PI  ++++IP L +L  ++  F +
Sbjct: 106 SASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 165

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ FW + +
Sbjct: 166 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIMI 217

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  ++A+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 271

Query: 246 LTMLGVIFLYDQLL 259
           + +  V F+ D+++
Sbjct: 272 VYVGIVGFILDRMI 285



 Score =  157 bits (396), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I  I +G  +G        + P  Q+L   P   + PL +
Sbjct: 101 LFWHLSASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPLSL 160

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +  + ++  I+
Sbjct: 161 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIM 216

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A I +E+   G       G+G +I ++       E++L 
Sbjct: 217 IPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 271 LVYVGIVGFILDRMI 285


>gi|152996830|ref|YP_001341665.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150837754|gb|ABR71730.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 323

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 16/219 (7%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+     Y            +++ V+    +AS+I IP+GI IG    + S + P  Q+
Sbjct: 95  SYVGKLRDYTGKPTFFDQIFTSLYTVLAGFGLASLIAIPLGILIGLNRSVYSALNPVIQV 154

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477
                   + PLV   VS  +++ +   S         +     W  L N   G +A   
Sbjct: 155 FKPVSPLAWLPLVTMVVSASYVSDDPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAVEK 214

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D   V+    +        I++P   P   TG   + G AW   I +E+ +      +  
Sbjct: 215 DLLNVSKVLQLGWMTHVMKIVIPSAIPLMFTGLRLSLGIAWMVLIAAEMLA------QNP 268

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           GLG ++ +  + G   S   +++ VL++      L+R +
Sbjct: 269 GLGKFVWDEFQNGSSNSLGRIMVAVLMIGFIGYLLDRVM 307



 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 84/207 (40%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L+   ++ L       L   +R +   L P++ + + +  L +L    +     Y
Sbjct: 116 SLYTVLAGFGLASLIAIPLGILIGLNRSVYSALNPVIQVFKPVSPLAWLPLVTMVVSASY 175

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L ++F +    +W    +    +  + +DL  VS+  +L        + 
Sbjct: 176 VSDDPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAVEKDLLNVSKVLQLGWMTHVMKIV 235

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 236 IPSAIPLMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 289

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A+L +  + +L D+++   +    W
Sbjct: 290 MVAVLMIGFIGYLLDRVMLTIQRFASW 316


>gi|218248270|ref|YP_002373641.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|33591065|gb|AAQ23047.1| CmpB [Cyanothece sp. PCC 8801]
 gi|218168748|gb|ACK67485.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
          Length = 280

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++   +A+I+ I  GI++G     +  + P  Q L   P   + P+ +
Sbjct: 84  LFWQSIASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 AALQ----QNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     +++L 
Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+RF+
Sbjct: 255 LVYIGAIGLMLDRFM 269



 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 106/257 (41%), Gaps = 22/257 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLP 62
           S+ I P I  +L F++V  + +++              +   I L             L 
Sbjct: 26  SQNILPPIVGILGFLVVWQLCSMIGLIKLPPPSDLWFNERTRIYLMYPFFNRGGTDVGLF 85

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +  +  R+L    ++ +           +      L P+   ++++P L ++   +  
Sbjct: 86  WQSIASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIALAA 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P        AA+F IF + VW +  +    +  IP+D   V +  +LS  + F+ 
Sbjct: 146 LQQNQP--------AALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFK 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  + +   +  I+
Sbjct: 198 ILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISDII 252

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  +  + D+ +
Sbjct: 253 LALVYIGAIGLMLDRFM 269


>gi|288935851|ref|YP_003439910.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288890560|gb|ADC58878.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 522

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 79/532 (14%), Positives = 169/532 (31%), Gaps = 71/532 (13%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +      +V    ++L    L      +   +   +++  +   +   L          
Sbjct: 44  AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P+   +  IP LG++   +V F      K+          I  + V  MT +  Q++ 
Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMTINTQQAVA 155

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++P+ L E SR    S WQ+  +L +P S+PG    + +++S  W  ++  E++   +  
Sbjct: 156 SVPQTLSEASRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279
               GIG  +    +   L  +   +  +     L                         
Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM------------------------ 245

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
                                  W      S  V       G + +    ++  L     
Sbjct: 246 ----------------------EWAANRACSRLVFWPQPAAGRLAWKPQASWRALPLPIV 283

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +  +        +  G+    +              +      ++ R VV   +   
Sbjct: 284 LLALWQLA--SQWGWIDSGLFSSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIA 341

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +  RP       P   +L       + PL+ + V     N N    + +   
Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + + F+ +           EVA    +  +   R +ILPG  P    G   A   AW 
Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +I +E      +     G+G+ +  + +    P ++ G++++     AL++
Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 16/266 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  S R  P    LLA   +      +  G+   + P  +       +    L      +
Sbjct: 271 PQASWRALPLPIVLLALWQLASQWGWIDSGL--FSSPLAVAARFVQGILSGELSAAMLAS 328

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +    + +    +   L A   R G +  P L++++ I +  +L     +  N   
Sbjct: 329 LGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNG 388

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           GK++   LA+ F         M FS  Q++      L+EV+R  RL  + +   + +P +
Sbjct: 389 GKIVFIALASFF--------PMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGA 440

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG+   + +++   W   + +E  +         GIGS +  A +  D+  IL  M+ +
Sbjct: 441 APGIFAGLRLALIYAWLGNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLV 495

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER 274
                  D+   R + + + ++R + 
Sbjct: 496 GITGAALDKA-GRLLEMRATRWRQQE 520


>gi|313112240|ref|ZP_07798013.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310884515|gb|EFQ43109.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 538

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 76/538 (14%), Positives = 159/538 (29%), Gaps = 71/538 (13%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
               +     ++V      L    L    + +  R+   ++  +            S R 
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGIASGAALGAWLGFSPRA 115

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             ++ P    +  IP L ++   +++F           EL  +  +  + V  +T     
Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +    L E +   RL      W L +P ++P  +  + ++++ GW  ++A E++   
Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +      GIG  +    +   L  +   +L +  V    D+ +      W +        
Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI-----QWLDH------- 269

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                                               +       G  R   P    Q   
Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394
                  L + W        +  A  +    V   T+   L     G +  ++ R +  +
Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++   +    G+ +G          P    L       + PL+ +               
Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +     + +L     G ++ P    E A    +  WR    ++LPG  P    G   A 
Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             AW  +I +E            G+G+ +  + +      +  G+L++      LN  
Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 17/226 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W          + WQS   ++    + ++        I++ R+   ++        +G W
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGIASGAALGAW 108

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +GF P     + P    LA  P   + PL +       L   + L   ++         +
Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G        +E A+   +        +ILP   P ++TG   A    W + +  E+ 
Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       + G+G  + +  +      V + +L++    + ++R +
Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI 264



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++           SLP     +  R L  +++     F+   L    R       
Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    ++ + I  ++     +F    P K+    +AA F         +  +  + + ++
Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL  W++   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I   ML +     L +  L + +   + ++R
Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536


>gi|254785247|ref|YP_003072675.1| nitrate transporter permease [Teredinibacter turnerae T7901]
 gi|237686520|gb|ACR13784.1| nitrate transporter, permease protein [Teredinibacter turnerae
           T7901]
          Length = 337

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 19/230 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +  Y      +     ++  V    + A+I+ +P+GI+ G     ++ + P  Q+   
Sbjct: 114 IKYREYTGAPTYLDQIWTSIKTVFTGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKP 173

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWL--------SLLMIFGTQWYILFNVIAGASAFPNDF 479
                + P+V   VS  ++  +           ++ +   + W  L N   G ++   D 
Sbjct: 174 VSPLAWLPIVTMVVSATYVTTDEAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDL 233

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             V     +  +     +++P   P   TG   + G  W   I +E+ +      +  GL
Sbjct: 234 MNVGKVLQLGWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 287

Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           G ++ +  + G   S   +++ VL +      L+R ++    L+ +G + 
Sbjct: 288 GKFVWDEFQNGSSNSLGRIMVAVLTIGIIGFLLDRIMFTLQNLFTFGDKR 337



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 80/196 (40%), Gaps = 13/196 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130
           + +  + + +           S      + PI+ I + +  L +L    +     Y    
Sbjct: 136 VFTGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKPVSPLAWLPIVTMVVSATYVTTD 195

Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 + L +   +    +W    +    + +I +DL  V +  +L  + K   L +P 
Sbjct: 196 EAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKVTKLVIPS 255

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYA 244
           S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A
Sbjct: 256 SLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRIMVA 309

Query: 245 MLTMLGVIFLYDQLLF 260
           +LT+  + FL D+++F
Sbjct: 310 VLTIGIIGFLLDRIMF 325


>gi|298290413|ref|YP_003692352.1| nitrate ABC transporter inner membrane subunit [Starkeya novella
           DSM 506]
 gi|296926924|gb|ADH87733.1| nitrate ABC transporter, inner membrane subunit [Starkeya novella
           DSM 506]
          Length = 303

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + + W   +++ RV +   +A+ + I +G+ IG        + P  Q+L   P   +
Sbjct: 101 PQDIGLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMRGLDPIFQVLRTVPPLAW 160

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ ++       + N     ++     W ++ N   G    P D++ VA    +  + +
Sbjct: 161 LPIALAAFR----DSNPSAIFVIFITAIWPVIINTAVGVRNIPQDYRNVAQVLRLNPFEF 216

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++       
Sbjct: 217 FAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLS 270

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++++ ++ +      L+R +
Sbjct: 271 DIIVALVYIGVVGFVLDRLV 290



 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++     +   L  +S      L PI  +++++P L +L   
Sbjct: 105 GLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMRGLDPIFQVLRTVPPLAWLPIA 164

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V++  RL+ ++ 
Sbjct: 165 LAAFRDSNP--------SAIFVIFITAIWPVIINTAVGVRNIPQDYRNVAQVLRLNPFEF 216

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 217 FAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLS 270

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F+ D+L+
Sbjct: 271 DIIVALVYIGVVGFVLDRLV 290


>gi|85705781|ref|ZP_01036878.1| possible nitrate transport system permease protein [Roseovarius sp.
           217]
 gi|85669771|gb|EAQ24635.1| possible nitrate transport system permease protein [Roseovarius sp.
           217]
          Length = 277

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 89/229 (38%), Gaps = 13/229 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  AW+ +          D    I +G  +++RV+   ++A+++ IP+G  IG  P   
Sbjct: 60  VLAKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYLMAALVAIPLGFLIGMSPVAY 118

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFIIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D+  VA +  +   +    +ILP   P  VTG   + G AW   + +E+   G     
Sbjct: 175 RKDWVNVARTHELGHLKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582
            TG+G Y+           V+  +L++    + L+           Y  
Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGIVGMMLDAAFATLQRAVAYAE 277



 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 14/191 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+LS  +++ L       L   S      L P + +++ I  L ++   +    +
Sbjct: 87  GYSIYRVLSGYLMAALVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFIIQD 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  + +D   V+R+  L   +  + + +
Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252

Query: 246 LTMLGVIFLYD 256
           L +  V  + D
Sbjct: 253 LMIGIVGMMLD 263


>gi|300866703|ref|ZP_07111387.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506]
 gi|300335303|emb|CBN56547.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506]
          Length = 281

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+++ I  G+ +G  P ++  + P  Q L       + P+ +
Sbjct: 83  LFWQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFLRMVAPLAWVPIAL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++   + W IL N   G    P+D+  VA    ++   ++  I+
Sbjct: 143 AALQ----QNEPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLSRKEYYLNIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG   A G AW A I +E+   G      TG+G +I  + ++    E++L 
Sbjct: 199 FPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----ITGIGFFIWNAYQQNYISEILLA 253

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 254 VVYIGAVGLILDRLM 268



 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 104/259 (40%), Gaps = 26/259 (10%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-----------VDIVPITLDVHS 60
           S+ I P +  +  F+ V   ++    G+ +   P  +              +        
Sbjct: 25  SQSILPPLLGIFGFLFVWQFLS--SSGLIKLPGPSSLWTDERTRILLMYPFMNSKTYGVG 82

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+     ++ +       L   +  L   L PI   ++ +  L ++   +
Sbjct: 83  LFWQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFLRMVAPLAWVPIAL 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                  P        AA+F IF + VW +  +  + +  IP D   V++  +LS  + +
Sbjct: 143 AALQQNEP--------AALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLSRKEYY 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P ++P +   + +++   W  ++A+E+++ G T     GIG +I  A ++  +  
Sbjct: 195 LNILFPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIT-----GIGFFIWNAYQQNYISE 249

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL A++ +  V  + D+L+
Sbjct: 250 ILLAVVYIGAVGLILDRLM 268


>gi|27380844|ref|NP_772373.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27354009|dbj|BAC50998.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 335

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV    ++A ++ IP+G  IG  P +S
Sbjct: 118 VGAKLWEHVRRPFYDNGPNDKGLGIQL-AYSIARVGTGYLLAVLVAIPLGFLIGMSPLLS 176

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + ++    ++   + W +L N + G ++ 
Sbjct: 177 KALDPFIQVLKPISPLAWMPLALYTIK----DSSISAIFVIFICSIWPMLLNTVFGVASV 232

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 233 RKEWINVARTLEVGTIRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 287

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 288 -TGIGYFVWNEWNNLSITNVIIAILLIGIVGMLLDQILAR 326



 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 92/205 (44%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L    + +  R+ +  ++++L       L   S  L   L P + +++ I  L ++
Sbjct: 136 NDKGLGIQLAYSIARVGTGYLLAVLVAIPLGFLIGMSPLLSKALDPFIQVLKPISPLAWM 195

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + ++AIF IF   +W M  +    + ++ ++   V+R+  +  
Sbjct: 196 PLALY--------TIKDSSISAIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGT 247

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 248 IRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 301

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            +  ++ A+L +  V  L DQ+L R
Sbjct: 302 SITNVIIAILLIGIVGMLLDQILAR 326


>gi|261855716|ref|YP_003262999.1| binding-protein-dependent transporters inner membrane component
           [Halothiobacillus neapolitanus c2]
 gi|261836185|gb|ACX95952.1| binding-protein-dependent transport systems inner membrane
           component [Halothiobacillus neapolitanus c2]
          Length = 320

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 18/222 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           + Y      +     ++  V+   I+AS+I IP+GI IG    + + + P  Q+L     
Sbjct: 98  YPYTGQPTFVSQIGTSLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSP 157

Query: 431 NVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
             + PLV   VS  + + +   S       + ++    W  + N   G +A   D   V+
Sbjct: 158 LAWLPLVTIVVSALYASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVS 217

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +  W   R I++P   P   TG   +   AW   I +E+ +      +  GLG ++
Sbjct: 218 RVLRLNWWTHVRKIVVPSALPMMFTGLRLSLSIAWMVLIAAEMLA------QNPGLGKFV 271

Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580
            +  + G   S   +++ V+++      L+R   L      +
Sbjct: 272 WDEFQNGSSDSLSRIMVAVVVIGLIGFMLDRTMLLLQRWISW 313



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 14/210 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +LS  +++ L           S  L   + PI+ I++ +  L +L    +    LY
Sbjct: 113 SLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPLAWLPLVTIVVSALY 172

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L ++  +    +W    +    +  I +DL  VSR  RL+ W     + 
Sbjct: 173 ASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSRVLRLNWWTHVRKIV 232

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           VP ++P +   + +S+S  W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 233 VPSALPMMFTGLRLSLSIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLSRI 286

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSNK 269
           + A++ +  + F+ D+  LL +  I W  K
Sbjct: 287 MVAVVVIGLIGFMLDRTMLLLQRWISWDKK 316


>gi|220910273|ref|YP_002485584.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7425]
 gi|219866884|gb|ACL47223.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7425]
          Length = 280

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++  I A+++ I VGI IG  P ++  + P  Q L   P   + PL +
Sbjct: 84  LFWQAMASLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWVPLSL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +               ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 AAFQ----QNQPAALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I +S +     +++L 
Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+R +
Sbjct: 255 LVYIGAIGLILDRVV 269



 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 113/259 (43%), Gaps = 26/259 (10%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----------DVHS 60
           S  I P I  L+ F+LV  +++ +  GI +   P  ++                      
Sbjct: 26  SNNIIPAIVGLIGFLLVWQLLSSV--GIIKLPGPDALITNERTRTYLLYPFFNRGGTDVG 83

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  +  R++   + + +       L   +  L   L PI   ++++P L ++  ++
Sbjct: 84  LFWQAMASLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWVPLSL 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F    P        AA+F IF + +W +  +    +  IP+D   V +  +LS  + F
Sbjct: 144 AAFQQNQP--------AALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKFF 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  + +   +  
Sbjct: 196 FKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISD 250

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+ A++ +  +  + D+++
Sbjct: 251 IILALVYIGAIGLILDRVV 269


>gi|159030590|emb|CAO88253.1| cmpB [Microcystis aeruginosa PCC 7806]
          Length = 276

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++    A+++ I VGI +G    ++  + P  Q L   P   + PL +
Sbjct: 81  LFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLSL 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 141 AALQ----QNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSNQKFFFKIL 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +     +++L 
Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISDIILA 251

Query: 559 VLIMCCFVLALNRFL 573
           +  +    L L+RF+
Sbjct: 252 LFYIGGVGLLLDRFM 266



 Score =  160 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 26/269 (9%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--- 58
           F ++      S  I P I  +L F+++  +++++  G+ +   P DI+        +   
Sbjct: 13  FNFSKFWKKHSGDILPPIVGILFFLILWQLMSMV--GLIKLPPPSDIITNERTRTYLMYP 70

Query: 59  --------HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
                     L      +  R+L     + +       +   +  L   L P+   ++++
Sbjct: 71  FFDRGGIDKGLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTV 130

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L ++  ++       P        AA+F IF + VW +  +    +  IP+D   V +
Sbjct: 131 PPLAWVPLSLAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQ 182

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
             +LS  + F+ + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I 
Sbjct: 183 VLQLSNQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIW 237

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            A +   +  I+ A+  + GV  L D+ +
Sbjct: 238 DAYQNNYISDIILALFYIGGVGLLLDRFM 266


>gi|152988829|ref|YP_001345661.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963987|gb|ABR86012.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 538

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 79/552 (14%), Positives = 165/552 (29%), Gaps = 71/552 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L   L+  + +       +     ++V      L    L    + +  R+   ++  +  
Sbjct: 42  LGLALLWWVASHYHWMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVAS 101

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                T    S R   ++ P    +  IP L ++   +++F           EL  +  +
Sbjct: 102 GAALGTWLGFSARAERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVL 153

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + V  +T      + +    L E +   RL      W L +P ++P  +  + ++++ 
Sbjct: 154 VKAVVVPVTIHTLVGVRDAQPKLREAAAVLRLPPRLLIWRLILPAALPAFLTGLRLALAQ 213

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           GW  ++A E++   +      GIG  +    +   L  +   +L +  V    D+ +   
Sbjct: 214 GWTSLLAVELLASSE------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI--- 264

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322
              W ++                                           +       G 
Sbjct: 265 --HWLDR-----------------------------------------RLLHWPQAATGE 281

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            R   P    Q          L + W        +  A  +    V   T+   L     
Sbjct: 282 FRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLP 341

Query: 383 GCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           G +  ++ R +  +++   +    G+ +G          P    L       + PL+ + 
Sbjct: 342 GALFDSLKRTLGGLLLGGGLGFLGGLLLGLWHPAERLFGPTFAALRQVAIFAWVPLLTAW 401

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                          +     + +L     G ++ P    E A    +  WR    + LP
Sbjct: 402 FGLG----EPAKLAFVALAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLALP 457

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P    G   A   AW  +I +E            G+G+ +  + +      +  G+L
Sbjct: 458 GAAPSVFAGLRLALIYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGML 512

Query: 561 IMCCFVLALNRF 572
           ++      LN  
Sbjct: 513 LVGLTGALLNAL 524



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 87/262 (33%), Gaps = 17/262 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L  +       F +   +  + + L      ++  VA    W S   +          
Sbjct: 14  RPLPRLAPPSSAAFARRLGDSLLPWSLP-LGLALLWWVASHYHWMSAQVLPTPELVWQSA 72

Query: 378 YVIWLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +  G       I++ R+   ++        +G W+GF       + P    LA  P  
Sbjct: 73  RELLAGELWSELAISLRRLAWGLLAGVASGAALGTWLGFSARAERLVFPTFSALAQIPTL 132

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL +       L   + L   ++         + + G        +E A+   +   
Sbjct: 133 AWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIHTLVGVRDAQPKLREAAAVLRLPPR 188

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                +ILP   P ++TG   A    W + +  E+ +       + G+G  + +  +   
Sbjct: 189 LLIWRLILPAALPAFLTGLRLALAQGWTSLLAVELLA------SSEGIGYLMVQGRQLFM 242

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V + +L++    + ++R +
Sbjct: 243 LDIVFVCILVIGLVGVGMDRAI 264



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++           SLP     +  R L  +++     F+   L         +  
Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWHPAERLFG 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    ++ + I  ++     +F    P K+    LAA F         +  +  + + ++
Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLAFVALAAFF--------PLLLATQRGIASL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL  W++   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLALPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I   ML +     L +  L + +   + ++R
Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536


>gi|50084748|ref|YP_046258.1| sulfate ester permease protein [Acinetobacter sp. ADP1]
 gi|49530724|emb|CAG68436.1| sulfate ester permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 541

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/550 (16%), Positives = 191/550 (34%), Gaps = 74/550 (13%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVP------ITLDVHSLPQYASRTTLRMLSAMVIS 79
           ++ + +  +      E  +P  I+          + +    L    + +  R    ++  
Sbjct: 43  IVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGLGLLSG 102

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L       L   SR     L      +  IP L +L   +++       K        I
Sbjct: 103 VLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLK--------I 154

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F IF + +  +       + +I   L+E++   + +       L +P ++P     + ++
Sbjct: 155 FIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLA 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ GW  ++A E++   +      GIG  +    +   L  +   +  +  V  ++D +L
Sbjct: 215 VAAGWTSLIAVELLASSE------GIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFIL 268

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
            R          +ER    +P  +   + F K N          ++  PLS  V  +  +
Sbjct: 269 HR----------IERKFVFWPHAALSAHTFHKKNRTDVFK----SWVLPLSLVVLWVVSS 314

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
                                       WF ++    +   W+ +  + +         +
Sbjct: 315 ----------------------------WFNLISSQILPAPWKVLEALWSGI---QDFSL 343

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I     +++R ++ +II  +I   VGI +G    I + + P    L       + PL+ +
Sbjct: 344 ITAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTA 403

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 L+      + +   T + +      G S+ P    EV+S+  +T  +    +IL
Sbjct: 404 WFGLEDLSK----IVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLIL 459

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P I P    G   A   +W AS  +E      I     G+G+Y+  + +      V+   
Sbjct: 460 PSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAAT 514

Query: 560 LIMCCFVLAL 569
           +++      L
Sbjct: 515 VLVAGLGAIL 524



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIW---------LGCITMFRVVV 392
           L IFW   VC  A+     +  ++      T +D  +               I++ R  +
Sbjct: 38  LAIFWIVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGL 97

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++   +  + +G+ +G+       +      L   P   + PL++  +       N   
Sbjct: 98  GLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIE----NSLK 153

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             ++   T   I  +  AG        KE+A+            ++LP   PY+ TG   
Sbjct: 154 IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRL 213

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A    W + I  E+ +       + G+G  +    +      V + + ++    +  +  
Sbjct: 214 AVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFI 267

Query: 573 LWH 575
           L  
Sbjct: 268 LHR 270



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ V++  + +       +    P  +++ +   +   SL      +  R +  ++I  L
Sbjct: 304 LSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGL 363

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +    + +  +L P L+ ++ I I  ++     +F           +L+ I  
Sbjct: 364 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 415

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  + ++ + +IP  L EVS + R++  Q+   L +P   P +     +++ 
Sbjct: 416 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 475

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W     +E ++         GIGSY+  A +  ++  ++ A + + G+  +   L
Sbjct: 476 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 527


>gi|206577350|ref|YP_002238921.1| putative sulfonate ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|206566408|gb|ACI08184.1| putative sulfonate ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
          Length = 522

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/532 (14%), Positives = 168/532 (31%), Gaps = 71/532 (13%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +      +V    ++L    L      +   +   +++  +   +   L          
Sbjct: 44  AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P+   +  IP LG++   +V F      K+          I  + V  MT +  Q++ 
Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMTINTQQAVA 155

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++P+ L E  R    S WQ+  +L +P S+PG    + +++S  W  ++  E++   +  
Sbjct: 156 SVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279
               GIG  +    +   L  +   +  +     L                         
Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM------------------------ 245

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
                                  W      S  V       G + +    ++  L     
Sbjct: 246 ----------------------EWAANRACSRLVFWPQPAAGRLAWKPQASWRALPLPIV 283

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +  +        +  G+    +              +      ++ R VV   +   
Sbjct: 284 LLALWQLA--SQWGWIDSGLFSSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIA 341

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +  RP       P   +L       + PL+ + V     N N    + +   
Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + + F+ +           EVA    +  +   R +ILPG  P    G   A   AW 
Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +I +E      +     G+G+ +  + +    P ++ G++++     AL++
Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 16/266 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  S R  P    LLA   +      +  G+   + P  +       +    L      +
Sbjct: 271 PQASWRALPLPIVLLALWQLASQWGWIDSGL--FSSPLAVAARFVQGILSGELSAAMLAS 328

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +    + +    +   L A   R G +  P L++++ I +  +L     +  N   
Sbjct: 329 LGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNG 388

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           GK++   LA+ F         M FS  Q++      L+EV+R  RL  + +   + +P +
Sbjct: 389 GKIVFIALASFF--------PMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGA 440

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG+   + +++   W   + +E  +         GIGS +  A +  D+  IL  M+ +
Sbjct: 441 APGIFAGLRLALIYAWLGNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLV 495

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER 274
                  D+   R + + + ++R + 
Sbjct: 496 GITGAALDKA-GRLLEMRATRWRQQE 520


>gi|159028058|emb|CAO88018.1| nrtB [Microcystis aeruginosa PCC 7806]
          Length = 277

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +   W+ I     +    DV  + W    ++ RV V   +A+I+ I  GI IG    I 
Sbjct: 58  VVSETWELIINPFFNNGGTDVG-LFWQIFASLQRVAVGFTLAAIVGIAAGILIGSSALIY 116

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I P  Q+L   P   + P+ ++       N       ++     W I+ N   G    
Sbjct: 117 DAIDPIFQILRTVPPLAWLPISLAAFR----NNEPSAIFVIFITAIWPIIINTAVGVQQV 172

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D+K V+    ++   ++  I+ P   PY  TG     G +W A + +E+   G     
Sbjct: 173 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG----- 227

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G +I ++       E++L ++ +      L+R +
Sbjct: 228 -VGIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 264



 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +       L   S  +   + PI  I++++P L +L  +
Sbjct: 79  GLFWQIFASLQRVAVGFTLAAIVGIAAGILIGSSALIYDAIDPIFQILRTVPPLAWLPIS 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F N  P        +AIF IF + +W +  +    +  +P+D + VSR  +LS  + 
Sbjct: 139 LAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEY 190

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ +  P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     + 
Sbjct: 191 FFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSMIS 244

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V FL D+L+
Sbjct: 245 EIILALIYVGIVGFLLDRLM 264


>gi|89902501|ref|YP_524972.1| nitrate transport permease [Rhodoferax ferrireducens T118]
 gi|89347238|gb|ABD71441.1| nitrate transport permease [Rhodoferax ferrireducens T118]
          Length = 288

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  +          D    I LG  ++ RV +  ++A ++ IP+G  IG  P +     
Sbjct: 75  IWGHLSDPFFDRGPNDKGIAIQLGY-SLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFD 133

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     + +     ++   + W +L N   G +A   ++
Sbjct: 134 PFIQVLKPISPLAWMPLALYTIK----DSSASGIFVIFICSIWPMLVNTAFGVAAVKREW 189

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 190 LNVARTLEVNPLRTAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGI 243

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++       S P V+  + ++    + L+   
Sbjct: 244 GYFVWNEWNNLSLPNVIFAIGVIGVVGMLLDLLF 277



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 82/197 (41%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+    ++++L       +   S  +     P + +++ I  L ++   +    
Sbjct: 97  LGYSLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFDPFIQVLKPISPLAWMPLALY--- 153

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  +  + IF IF   +W M  +    +  + R+   V+R+  ++  +  + + 
Sbjct: 154 -----TIKDSSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVI 208

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L  +++A
Sbjct: 209 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLPNVIFA 262

Query: 245 MLTMLGVIFLYDQLLFR 261
           +  +  V  L D L  +
Sbjct: 263 IGVIGVVGMLLDLLFGQ 279


>gi|149198798|ref|ZP_01875841.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149138234|gb|EDM26644.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 505

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 20/221 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I     Y     ++    +++  V+    +A++I IP+GI  G  P I + + P  Q   
Sbjct: 276 IFKGKEYNSNGSIVDYIKLSITTVLFGFFLAAVIAIPMGILCGLSPSIMTALNPLIQTFR 335

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLW-----------LSLLMIFGTQWYILFNVIAGASAF 475
                 +  + +  +    +                  + +   + W  L N   G S+ 
Sbjct: 336 PVSPLAWVLITIQIIDGIFVGDKALTGEILKNTFLHAGITVALCSMWATLSNTALGVSSV 395

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D   VA    +  +     I++P   PY  TG     G  W   IV+E+ +       
Sbjct: 396 DPDHMNVAKVLKLNWFDRIFKIVIPSAIPYIFTGLRITLGVGWMVLIVAEMMA------T 449

Query: 536 TTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           + GLG +I +  +     S   +++ + I+      L+R +
Sbjct: 450 SRGLGWFIDQEYQNNKVESLANIIVCIFIIGLIGAVLDRIM 490



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              S+  Y   +   +L    ++ +       L   S  +   L P++   + +  L ++
Sbjct: 284 SNGSIVDYIKLSITTVLFGFFLAAVIAIPMGILCGLSPSIMTALNPLIQTFRPVSPLAWV 343

Query: 117 TFTVVYFMNLYPG--KVIGAELAAIFA-----IFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
             T+     ++ G   + G  L   F      +    +W    +    + ++  D   V+
Sbjct: 344 LITIQIIDGIFVGDKALTGEILKNTFLHAGITVALCSMWATLSNTALGVSSVDPDHMNVA 403

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +  +L+ + + + + +P ++P +   + +++  GW  ++ +EM+          G+G +I
Sbjct: 404 KVLKLNWFDRIFKIVIPSAIPYIFTGLRITLGVGWMVLIVAEMMA------TSRGLGWFI 457

Query: 230 ALAIKEQ---DLLAILYAMLTMLGVIFLYDQL--LFRPMIVWSN 268
               +      L  I+  +  +  +  + D++  +F+ ++ +++
Sbjct: 458 DQEYQNNKVESLANIIVCIFIIGLIGAVLDRIMSIFQKLVSFND 501


>gi|46200802|ref|ZP_00056318.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 277

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 23/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           I+ R+ P +  L   + +  +              + + D  P+ +D           L 
Sbjct: 27  IAGRVLPPMIGLAVVLGIWQL-ACSGPNAMLPGPAKVVHDTWPLIVDPFFDHGGVDKGLF 85

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+     +S +       L  +S      L PI  +++++P L +L  ++  
Sbjct: 86  WHLFASLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLPISLAA 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        +AIF IF + VW +  +    + NIP+D   V+   RLS  + F+ 
Sbjct: 146 FRQADP--------SAIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFK 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+
Sbjct: 198 IVIPATVPYIFTGLKIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLMSEII 251

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  V F+ D+++
Sbjct: 252 LALIYVGLVGFMLDRMI 268



 Score =  160 bits (404), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 83/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V   ++++  + +G+ IG        + P  Q+L   P   + P+ +
Sbjct: 84  LFWHLFASLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLPISL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         +     ++   + W I+ N   G    P D++ VA+   ++   ++  I+
Sbjct: 144 AAFR----QADPSAIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFKIV 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 200 IPATVPYIFTGLKIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLMSEIILA 253

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 254 LIYVGLVGFMLDRMI 268


>gi|27377915|ref|NP_769444.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27351061|dbj|BAC48069.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 298

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           R+ P +  +    LV  ++     G       R   D   + LD           L  + 
Sbjct: 46  RVIPPLVVIALLTLVWELVCRRT-GSALPPPSRVFKDTKELILDPFFDHGGIDKGLFWHL 104

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S +  R+     +S +       L  +S      L P+  ++++IP L +L  ++  F +
Sbjct: 105 SASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGLDPLFQVLRTIPPLAWLPLSLAAFRD 164

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP+D   V+   +L+  + F  + +
Sbjct: 165 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFGKIMI 216

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 217 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 270

Query: 246 LTMLGVIFLYDQLL 259
           + +  V F+ D+L+
Sbjct: 271 IYVGIVGFVLDRLI 284



 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 100/275 (36%), Gaps = 18/275 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+     K             E  +++     V  +L + W  V       +   S  +
Sbjct: 20  APVVAMTPKRPPRSEAYARMVRETAVRVIPPLVVIALLTLVWELVCRRTGSALPPPSRVF 79

Query: 367 IVNHFTYQDVLY--------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                   D  +        + W    ++ RV     +++I  I +G+ +G        +
Sbjct: 80  KDTKELILDPFFDHGGIDKGLFWHLSASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGL 139

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  Q+L   P   + PL ++       +       ++   + W I+ N   G    P D
Sbjct: 140 DPLFQVLRTIPPLAWLPLSLAAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQD 195

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           ++ VA+   +    ++  I++P   PY  TG     G +W A + +E+   G       G
Sbjct: 196 YRNVAAVVQLNPLEFFGKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VG 249

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G +I ++       E++L ++ +      L+R +
Sbjct: 250 IGFFIWDAWNSSHISEIILALIYVGIVGFVLDRLI 284


>gi|290509885|ref|ZP_06549256.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|289779279|gb|EFD87276.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 522

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 82/532 (15%), Positives = 170/532 (31%), Gaps = 71/532 (13%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +      +V    ++L    L      +   +   +++  +   +   L          
Sbjct: 44  AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P+   +  IP LG++   +V F      K+          I  + V  M  +  Q++ 
Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMIINTQQAVA 155

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++P+ L E  R    S WQ+  +L +P S+PG    + +++S  W  ++  E++   +  
Sbjct: 156 SVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279
               GIG  +    +   L  +   +  +     L           W+            
Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM---------EWAA----------- 249

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
                             + +        L+   +   R L       P   L L     
Sbjct: 250 ------------NRACSRLVFWPQPAAGRLAWKPQASWRALP-----LPIVLLALWQLAS 292

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               +D   F     VA       +   ++                ++ R VV   +   
Sbjct: 293 QWGWIDSVLFSSPLAVAARFVQGILSGELSA-----------AMLASLGRAVVGGALGIA 341

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +  RP       P   +L       + PL+ + V     N N    + +   
Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + + F+ +           EVA    +  +   R +ILPG  P    G   A   AW 
Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +I +E      +     G+G+ +  + +    P ++ G++++     AL++
Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 92/232 (39%), Gaps = 14/232 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +       +    L      +  R +    + +    +   L A   R G +  P
Sbjct: 303 SSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTP 362

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ I +  +L     +  N   GK++   LA+ F         M FS  Q++    
Sbjct: 363 TLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFF--------PMFFSTLQAVLQRN 414

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L+EV+R  RL  + +   + +P + PG+   + +++   W   + +E  +        
Sbjct: 415 PQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSGV---- 470

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            GIGS +  A +  D+  IL  M+ +       D+   R + + + ++R + 
Sbjct: 471 -GIGSLMINAQQLLDMPTILCGMVLVGITGAALDKA-GRLLEMRATRWRQQE 520


>gi|119476871|ref|ZP_01617152.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [marine gamma proteobacterium HTCC2143]
 gi|119449678|gb|EAW30915.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [marine gamma proteobacterium HTCC2143]
          Length = 337

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V   +Y      +     ++  V    ++A+++ +P+GI  G    +   I P  Q    
Sbjct: 112 VKIRSYTGKATFLDQIFTSLLTVAFGFMVATLVAVPLGILCGLSESLYRCINPIIQTFKP 171

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +       L  +  +     W  + N I G ++   D  
Sbjct: 172 VSPLAWLPLVTMVVSALYVSDDPLFDKAFLTSAFTVALCCLWPTVVNTIVGVASIDRDLI 231

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +      R +++P   P   TG   +    W   I +E+ +      +  GLG
Sbjct: 232 NVSRVLRLGSLVHIRKVVIPSAIPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLG 285

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            +I +  + G   S   +++ VL++      L+  +
Sbjct: 286 KFIWDEFQNGSSNSLGRIMVAVLVIGIIGFILDSLM 321



 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L +    +++ L       L   S  L   + PI+   + +  L +L    +    LY
Sbjct: 130 SLLTVAFGFMVATLVAVPLGILCGLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALY 189

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    A L + F +    +W    +    + +I RDL  VSR  RL        + 
Sbjct: 190 VSDDPLFDKAFLTSAFTVALCCLWPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVV 249

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S++ GW  ++A+EM+         PG+G +I    +      L  I
Sbjct: 250 IPSAIPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSNSLGRI 303

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+L +  + F+ D L+ 
Sbjct: 304 MVAVLVIGIIGFILDSLML 322


>gi|56752484|ref|YP_173185.1| permease [Synechococcus elongatus PCC 6301]
 gi|81300298|ref|YP_400506.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|75504666|sp|Q55106|CMPB_SYNE7 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|81676789|sp|Q5MZ55|CMPB_SYNP6 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|1019379|dbj|BAA05387.1| CmpB [Synechococcus elongatus PCC 7942]
 gi|56687443|dbj|BAD80665.1| permease protein [Synechococcus elongatus PCC 6301]
 gi|81169179|gb|ABB57519.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
          Length = 278

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     IA+II I VGI +G    +++ + P  Q L       + P+ +
Sbjct: 82  LFWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIAL 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           ++     W IL N   G    P D+  VA    ++  ++   ++
Sbjct: 142 VAFQ----QNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVV 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G +W A I +E+   G +     G+G +I ++ ++    +++L 
Sbjct: 198 LPAALPYIFTGLRIAIGLSWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIILA 252

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+RF+
Sbjct: 253 VIYIGAVGLLLDRFV 267



 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 18/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+     I+ +       L   +R+L  +L P+   ++ I  L ++  
Sbjct: 80  KGLFWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPI 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F    P        AAIF IF + VW +  +  + +  IP+D   V+R  R+S  +
Sbjct: 140 ALVAFQQNQP--------AAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSK 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +
Sbjct: 192 YLMKVVLPAALPYIFTGLRIAIGLSWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYV 246

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             I+ A++ +  V  L D+      + W  ++
Sbjct: 247 SDIILAVIYIGAVGLLLDR-----FVAWLQRW 273


>gi|331019006|gb|EGH99062.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 284

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +A++++          D    I L   ++ RV     +A+++ IP+G  IG  P +  
Sbjct: 68  AALAYKNLSDPFYDRGPNDKGIGIQL-AYSLGRVGAGYFLAALVAIPLGFLIGMSPLLYR 126

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + PF Q+L       + P+ +  +     +       ++   + W +L N   G +   
Sbjct: 127 ALDPFIQVLKPISPLAWMPIALYTIKDSTTS----AIFVIFICSVWPMLINTAFGVAGVR 182

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            ++  VA    ++  R    +ILP   P  +TG   + G AW   + +E+   G      
Sbjct: 183 KEWLNVARVLEVSPLRKAFLVILPAAAPTIITGMRISMGIAWLVIVAAEMLIGG------ 236

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           TG+G ++       S   V+  VL++    + L+  ++  L  
Sbjct: 237 TGIGYFVWNQWNNLSLGNVIFAVLMIGVIGMLLD-LMFARLQR 278



 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+ +   ++ L       L   S  L   L P + +++ I  L ++   +    
Sbjct: 93  LAYSLGRVGAGYFLAALVAIPLGFLIGMSPLLYRALDPFIQVLKPISPLAWMPIALY--- 149

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  +  +AIF IF   VW M  +    +  + ++   V+R   +S  +K + + 
Sbjct: 150 -----TIKDSTTSAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVI 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM++ G       GIG ++        L  +++A
Sbjct: 205 LPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNQWNNLSLGNVIFA 258

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  +  L D +  R
Sbjct: 259 VLMIGVIGMLLDLMFAR 275


>gi|91786202|ref|YP_547154.1| nitrate transport permease [Polaromonas sp. JS666]
 gi|91695427|gb|ABE42256.1| nitrate transport permease [Polaromonas sp. JS666]
          Length = 287

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 11/218 (5%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G      W+ +   +      D   +I LG  ++ RV +  ++A  + +P+G  IG  P
Sbjct: 67  LGQMGAAIWKQVSNPLYDNGPNDKGILIQLGH-SLARVGLGFLLACAVAVPLGFVIGMSP 125

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +     PF Q+L       + PL +  +     + ++    ++   + W +L N   G 
Sbjct: 126 LLRRAFDPFIQVLKPISPLAWMPLALYTIK----DSSISGIFVIFICSVWPMLINTAFGV 181

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           SA   ++  VAS+  ++  R    +ILP   P   TG   + G AW   + +E+   G  
Sbjct: 182 SAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGG-- 239

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               TG+G ++       S   V+  +L++    + L+
Sbjct: 240 ----TGIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLD 273



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 14/192 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+    +++         +   S  L     P + +++ I  L ++   +    
Sbjct: 96  LGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALY--- 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + ++ IF IF   VW M  +    +  + R+   V+ +  +S  +K + + 
Sbjct: 153 -----TIKDSSISGIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVI 207

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +   M +SM   W  +VA+EM+V G       GIG ++        L  +++A
Sbjct: 208 LPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFA 261

Query: 245 MLTMLGVIFLYD 256
           +L +  V  L D
Sbjct: 262 ILVIGIVGMLLD 273


>gi|94501158|ref|ZP_01307681.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94426734|gb|EAT11719.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 332

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 16/218 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y      Y+  +  I     +++ V    ++A  I IP+GI  G    +++ + P  Q+ 
Sbjct: 107 YEPRVREYRGRVTFIDQIITSLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIF 166

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPND 478
                  + P+V   VS  +++ + W        ++ +     W  L N   G +    D
Sbjct: 167 KPVSPLAWLPIVTMVVSAVYVSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISED 226

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              V+    +  +   R ++LP   P   TG   + G  W   I +E+ +      +  G
Sbjct: 227 LINVSKVLRLNWFTKVRKVVLPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPG 280

Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           LG ++ +  + G   S   +++ V+ +      L+  +
Sbjct: 281 LGKFVWDEFQNGSSDSLGRIMVAVITIGFIGFILDSLM 318



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   + +  ++++            S+ L   L PI+ I + +  L +L    +    +Y
Sbjct: 127 SLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVY 186

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + +   +    +W    +    + NI  DL  VS+  RL+ + K   + 
Sbjct: 187 VSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISEDLINVSKVLRLNWFTKVRKVV 246

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   M +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 247 LPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRI 300

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266
           + A++T+  + F+ D   L+ +  + W
Sbjct: 301 MVAVITIGFIGFILDSLMLMLQRWVSW 327


>gi|89055532|ref|YP_510983.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88865081|gb|ABD55958.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 356

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 17/210 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V    ++A+++ +P+GI  G     ++ + P  Q+        + P+V   VS   
Sbjct: 153 SITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALA 212

Query: 446 LNPNLW------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +  L+       ++ +   + W  L N   G ++   D   V+    +  W   + ++L
Sbjct: 213 ADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVL 272

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVV 556
           P   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S  +++
Sbjct: 273 PSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 326

Query: 557 LGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           + VL +      L+R ++    L+ +    
Sbjct: 327 VAVLTIGLIGFLLDRLMFTIQSLFTFTNNR 356



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +++ +        A  S      L PI+ I + +  L +L    +    L 
Sbjct: 153 SITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALA 212

Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G    + + +   +    +W    +    + +I +DL  VS+  ++  W K   L +
Sbjct: 213 ADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVL 272

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242
           P ++P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+
Sbjct: 273 PSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 326

Query: 243 YAMLTMLGVIFLYDQLLF 260
            A+LT+  + FL D+L+F
Sbjct: 327 VAVLTIGLIGFLLDRLMF 344


>gi|2501375|sp|Q51881|NRTB_PHOLA RecName: Full=Nitrate transport permease protein nrtB
 gi|887567|emb|CAA79657.1| hydrophobic protein [Geitlerinema sp. PCC 8501]
          Length = 279

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V  ++A+I  I +GI IG    +   + P  Q+L   P   + P+ +
Sbjct: 82  LFWQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISL 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++     W I+ N   G    P D+  VA    ++   ++  ++
Sbjct: 142 AAFR----DSQPAAIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVL 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G +W A + +E+ + G       G+G +I ++   GS  EV+L 
Sbjct: 198 LPATVPYIFTGLKIAIGLSWLAIVAAEMLTGG------VGIGFFIWDAYNSGSNSEVILA 251

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L LN  +
Sbjct: 252 IIYVGLVGLLLNALV 266



 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 23/260 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI---------VPITLDVH 59
             + + I  +I   +AF +++GI  +L  G      P  +V              +    
Sbjct: 21  ALVGKTIRRSIPTAIAFFVLLGIWQLLCSGENAACRPIQVVQESWDLIIDPFYRGSGTDQ 80

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    + +  R+    +++ +       L   S  +   L PI  +++++P L +L  +
Sbjct: 81  GLFWQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPIS 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        AAIF IF + +W +  +    + NIP+D   V+R  +LS    
Sbjct: 141 LAAFRDSQP--------AAIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDY 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P ++P +   + +++   W  +VA+EM+  G       GIG +I  A       
Sbjct: 193 FLKVLLPATVPYIFTGLKIAIGLSWLAIVAAEMLTGGV------GIGFFIWDAYNSGSNS 246

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            ++ A++ +  V  L + L+
Sbjct: 247 EVILAIIYVGLVGLLLNALV 266


>gi|39934437|ref|NP_946713.1| sulfate ester transport system permease [Rhodopseudomonas palustris
           CGA009]
 gi|39648286|emb|CAE26806.1| sulfate ester transport system permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 538

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/563 (12%), Positives = 171/563 (30%), Gaps = 70/563 (12%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P ++       +   +A + +  +         +      +V      L   +L    + 
Sbjct: 30  PAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPALVWQTAGELLADNLLSNLAI 89

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L    ++ L           SRR+   + P    +  +P L ++ F ++      
Sbjct: 90  SLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIALVQVPTLAWIPFLMMVLGLG- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   I  I  + V  +    +  + ++   L E +R  RL  +++   + +P 
Sbjct: 149 -------EALKIVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRILRLGFFRRLGSVILPA 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +  + + ++ GW  +VA E++   +      GIG  +    +   L  +   +L 
Sbjct: 202 ALPAFLTGLRLGLAQGWTSLVAVELLASSE------GIGFLMVWGRQLFQLDVVFVCILV 255

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           +  V  + D                                      L  +  ++  +  
Sbjct: 256 IGIVGLVMD------------------------------------RGLNVVDRAAVRWPR 279

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P     +       ++ + FP   L   +    S  +          V   +        
Sbjct: 280 PALAEHRTARGGYRLLSWLFPAGLLAAWAAASASGAISPTMLPSPAAVLSVLGHGLADGS 339

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                            +++ R  + + + +     VG+ +G    +          L  
Sbjct: 340 FES-----------AMGLSLQRAFIGLALGAGSGFVVGLAMGLNRPLDRLFNGTLAALRL 388

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL+ + V     +        +   + + +      G +       E + +  
Sbjct: 389 VAIFAWIPLLTAWVGLGEASK----ITFVAIASFFPMQLAAYRGVATLSPHLIEASWTLR 444

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G    R ++LPGI P    G   A    W  ++ +E            G+G+ +  + 
Sbjct: 445 LGGIDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFM-----PSGGGIGSLMIGAQ 499

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           +      V+  ++++      LN
Sbjct: 500 QMFRTDVVLAAMVMIGVVAALLN 522



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 84/268 (31%), Gaps = 18/268 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AWQSIG 365
               R   V  F     F      +  + +  +    ++   ++             +  
Sbjct: 10  DYPPRGAAVAGFRTLPRFGVPAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPA 69

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +           ++    I++ R++    +A++    +G  +G    + + I P    L
Sbjct: 70  LVWQTAGELLADNLLSNLAISLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIAL 129

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P ++  +            +++I      ++     G         E    
Sbjct: 130 VQVPTLAWIPFLMMVLGLGEA----LKIVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRI 185

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +  +R    +ILP   P ++TG        W + +  E+ +       + G+G  +  
Sbjct: 186 LRLGFFRRLGSVILPAALPAFLTGLRLGLAQGWTSLVAVELLA------SSEGIGFLMVW 239

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +      V + +L++    L ++R L
Sbjct: 240 GRQLFQLDVVFVCILVIGIVGLVMDRGL 267



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++ ++   L   S       +  R    + +     FV       +R L  +  
Sbjct: 321 LPSPAAVLSVLGHGLADGSFESAMGLSLQRAFIGLALGAGSGFVVGLAMGLNRPLDRLFN 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L  ++ + I  ++     +       K+    +A+ F         M  + Y+ +  +
Sbjct: 381 GTLAALRLVAIFAWIPLLTAWVGLGEASKITFVAIASFF--------PMQLAAYRGVATL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E S + RL G  +   L +P   P +   + +++   W   + +E  +       
Sbjct: 433 SPHLIEASWTLRLGGIDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFMPSG---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +      ++ A + M+GV+      +   +   + ++R
Sbjct: 489 -GGIGSLMIGAQQMFR-TDVVLAAMVMIGVVAALLNAIGSRIEARATRWR 536


>gi|149203199|ref|ZP_01880169.1| possible nitrate transport system permease protein [Roseovarius sp.
           TM1035]
 gi|149143032|gb|EDM31071.1| possible nitrate transport system permease protein [Roseovarius sp.
           TM1035]
          Length = 277

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 13/229 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  AW+ +          D    I +G  +++RV+   ++A+++ IP+G  IG  P   
Sbjct: 60  VMAKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYLMAAVVAIPLGFLIGMSPVAY 118

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D+  VA +  +  ++    +ILP   P  VTG   + G AW   + +E+   G     
Sbjct: 175 RQDWVNVARTHELGHFKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582
            TG+G Y+           V+  +L++    + L+           Y  
Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGIVGMMLDAAFATLQRAVAYAE 277



 Score =  143 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 14/191 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+LS  +++ +       L   S      L P + +++ I  L ++   +    +
Sbjct: 87  GYSIYRVLSGYLMAAVVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFVIQD 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  + +D   V+R+  L  ++  + + +
Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252

Query: 246 LTMLGVIFLYD 256
           L +  V  + D
Sbjct: 253 LMIGIVGMMLD 263


>gi|148254269|ref|YP_001238854.1| nitrate transport permease NrtB [Bradyrhizobium sp. BTAi1]
 gi|146406442|gb|ABQ34948.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp.
           BTAi1]
          Length = 304

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           R+ P +  L  F++V  ++     G       R   D   +  D           L  + 
Sbjct: 52  RVVPPLIVLALFLIVWELLCRRA-GSALPPPSRVFSDTRELIFDPFFDHGGIDKGLFWHL 110

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     I+ +      TL  +S      L PI  ++++IP L +L  ++  F +
Sbjct: 111 EASLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 170

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + VW +  +    + NIP+D   V+   +L+  + F  + +
Sbjct: 171 GQP--------SAIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIMI 222

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 223 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIVLAL 276

Query: 246 LTMLGVIFLYDQLL 259
             +  + F+ D+L+
Sbjct: 277 FYVGIIGFVLDRLI 290



 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   IA+I+ + VG  IG        + P  Q+L   P   + PL +
Sbjct: 106 LFWHLEASLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSL 165

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 166 AAFRDGQPS----AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIM 221

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       E+VL 
Sbjct: 222 IPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIVLA 275

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 276 LFYVGIIGFVLDRLI 290


>gi|283784926|ref|YP_003364791.1| ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282948380|emb|CBG87966.1| ABC transporter, permease component [Citrobacter rodentium ICC168]
          Length = 522

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/478 (15%), Positives = 153/478 (32%), Gaps = 71/478 (14%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             +   + P+   +  IP LG++   +V F      K+          I  + V  +T +
Sbjct: 98  PAVAQRVEPLFYALAQIPTLGWIPLFMVLFGIDNGLKLA--------VIIKTTVVPLTIN 149

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Q++ ++P  L E  +    S WQ+  +L +P S+PG    + +++S  W  ++  E++
Sbjct: 150 TQQAVTSVPLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELL 209

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
              +      GIG  +    +   L  +   ++ +     +                   
Sbjct: 210 ASSE------GIGYLMVWGRQLFQLDIVFVIIVVVGLSGMIM------------------ 245

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
                                        W      S  V       G + +    ++  
Sbjct: 246 ----------------------------EWAANRACSRLVYWPQPAAGRLAWKPQASWRA 277

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L     +  +  +          +  + Q++            L    L   ++ R  V 
Sbjct: 278 LQLPVMLLALWQLASQWSWIDSTLFSSPQAVAERFIQGALNGELTAAMLA--SLGRAFVG 335

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             +     +  G+ +  RP       P   +L       + PL+ + V     N N    
Sbjct: 336 GALGIASGLLCGLILALRPRAGKIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKI 391

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +   + + + F+ +           EVA    +      R +ILPG  P    G   A
Sbjct: 392 VFIALASFFPMFFSTLQAVRQRNPQLDEVARVLRLGALTRLRSLILPGAAPGIFAGLRLA 451

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              AW  +I +E            G+G+ +  + +    P ++ G++++     AL++
Sbjct: 452 LIYAWLGNIGAEYFMSSG-----PGIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 14/232 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P+ + +          L      +  R      + +    +   + A   R G +  P
Sbjct: 303 SSPQAVAERFIQGALNGELTAAMLASLGRAFVGGALGIASGLLCGLILALRPRAGKIFTP 362

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ I +  +L     +  N   GK++   LA+ F         M FS  Q++    
Sbjct: 363 TLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFF--------PMFFSTLQAVRQRN 414

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L+EV+R  RL    +   L +P + PG+   + +++   W   + +E  +        
Sbjct: 415 PQLDEVARVLRLGALTRLRSLILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSG----- 469

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           PGIGS +  A +  D+  IL  M+ +       D+   R + + + ++R + 
Sbjct: 470 PGIGSLMINAQQLLDMPTILCGMVLVGITGAALDKA-GRVLELRATRWRQQE 520



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 10/162 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G  P ++ +++P    LA  P   + PL +          N     ++I  T   +  N 
Sbjct: 95  GLVPAVAQRVEPLFYALAQIPTLGWIPLFMVLFGI----DNGLKLAVIIKTTVVPLTINT 150

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               ++ P    E     + + W+  R++++P   P + TG   A   AW + IV E+ +
Sbjct: 151 QQAVTSVPLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLA 210

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                  + G+G  +    +      V + ++++    + + 
Sbjct: 211 ------SSEGIGYLMVWGRQLFQLDIVFVIIVVVGLSGMIME 246


>gi|293606733|ref|ZP_06689086.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292814883|gb|EFF74011.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 280

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ I          D   +      ++ RV+    +A+++ IP+G  IG    +     
Sbjct: 67  LWQHIKDPFYDRGPNDKG-IGVQLAYSVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFD 125

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     +       ++   + W +L N   G  A   D+
Sbjct: 126 PFIQVLKPISPLAWMPLALYTIKDADTS----AIFVIFICSLWPMLVNTAFGVGAVRQDW 181

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 182 LNVARTLEVSRLRTALQVILPAAAPTIMTGMRISVGIAWLVIVAAEMLIGG------TGI 235

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G ++       S   ++  +L +    + L+  L  
Sbjct: 236 GYFVWNEWNNLSIANIICAILFIGLIGMLLDTVLAR 271



 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+   ++ L       L   S+ +     P + +++ I  L ++   +    
Sbjct: 89  LAYSVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLALY--- 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  A+ +AIF IF   +W M  +    +  + +D   V+R+  +S  +    + 
Sbjct: 146 -----TIKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVI 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM++ G       GIG ++        +  I+ A
Sbjct: 201 LPAAAPTIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICA 254

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  +  L D +L R
Sbjct: 255 ILFIGLIGMLLDTVLAR 271


>gi|307309035|ref|ZP_07588715.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium
           meliloti BL225C]
 gi|306900508|gb|EFN31122.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium
           meliloti BL225C]
          Length = 297

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     ++        TL  +S      L PI  +++++P L +L  
Sbjct: 97  QGLFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F +  P        +AIF IF + +W +  +    + NIP+D + V++  RL+G++
Sbjct: 157 SLAAFQDGTP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFE 208

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 209 YFGKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V FL D+L+
Sbjct: 263 SDIIVALIYVGIVGFLLDRLM 283



 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+ + + +G  +G        + P  Q+L   P   + PL +
Sbjct: 99  LFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++     W I+ N   G    P D++ VA    + G+ ++  I+
Sbjct: 159 AAFQDGTPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIM 214

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       ++++ 
Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 269 LIYVGIVGFLLDRLM 283


>gi|86136960|ref|ZP_01055538.1| putative nitrate transporter [Roseobacter sp. MED193]
 gi|85826284|gb|EAQ46481.1| putative nitrate transporter [Roseobacter sp. MED193]
          Length = 357

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H TY            ++  V    +I S+I IP+GI  G  P  ++ I P  Q+   
Sbjct: 135 VRHRTYTGKPTYYQQIWTSIKTVFFGFLIGSVIAIPLGIMAGLSPTANAAINPIIQIFKP 194

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   +       L  ++ +   + W  L N   G ++   D  
Sbjct: 195 VSPLAWLPIVTMVVSAVYATNDGLFSKSFLVSAITVTLCSLWPTLINTALGVASIDKDLI 254

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 255 SVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ V  +      L+R ++    ++ +    
Sbjct: 309 KFVWDEFQNGSSQSLAKIMVAVFTIGIIGFLLDRIMFALQSMFTFTENR 357



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 12/195 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I  +       +A  S      + PI+ I + +  L +L    +    +Y    
Sbjct: 157 VFFGFLIGSVIAIPLGIMAGLSPTANAAINPIIQIFKPVSPLAWLPIVTMVVSAVYATND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VS+  ++S + K   L +P +
Sbjct: 217 GLFSKSFLVSAITVTLCSLWPTLINTALGVASIDKDLISVSKVLKMSTYSKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAV 330

Query: 246 LTMLGVIFLYDQLLF 260
            T+  + FL D+++F
Sbjct: 331 FTIGIIGFLLDRIMF 345


>gi|294341758|emb|CAZ90183.1| Nitrate transporter component [Thiomonas sp. 3As]
          Length = 304

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 13/218 (5%)

Query: 359 IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           + WQS   +  H  Y    + + + W    ++ RV     +A+++ IP+G  IG    ++
Sbjct: 84  VTWQSAQKVFAHPFYDNGPNDVGIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLN 143

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P   LL       + P+ +   S    N        +   + W ++ N   G    
Sbjct: 144 RMLSPLISLLRPVSPLAWLPIGLYVFS----NAPAAAIYTIFICSIWPMMINTAIGVQRI 199

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D+  VA    ++ W+ +  I+LP + PY +TG   + G AW   + +E+ + G     
Sbjct: 200 PADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGG----- 254

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            TG+G ++       +   +++ +L++    + L   L
Sbjct: 255 -TGIGFWLWNEWNNLNLAHIIIAILVIGVTGMVLEGAL 291



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 14/196 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L          + + L  +L P++ +++ +  L +L   
Sbjct: 106 GIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLNRMLSPLISLLRPVSPLAWLPIG 165

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F N        A  AAI+ IF   +W M  +    +  IP D   V+R   LS W+ 
Sbjct: 166 LYVFSN--------APAAAIYTIFICSIWPMMINTAIGVQRIPADYLNVARVLDLSTWKV 217

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P  MP ++  + +S+   W  +VA+EM+  G       GIG ++       +L 
Sbjct: 218 FTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGGT------GIGFWLWNEWNNLNLA 271

Query: 240 AILYAMLTMLGVIFLY 255
            I+ A+L +     + 
Sbjct: 272 HIIIAILVIGVTGMVL 287


>gi|332666518|ref|YP_004449306.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335332|gb|AEE52433.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 334

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 16/213 (7%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            TY      +     ++  V V  + AS + +P+G+  G   +I + + P  Q+L     
Sbjct: 118 MTYTGKPTYLDQIITSLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSP 177

Query: 431 NVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
             + P+V   VS  ++  +       +  ++ +   + W  L N   G ++   D+  VA
Sbjct: 178 LAWLPIVTMIVSAVYVTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVA 237

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++  +    +ILP   P   TG     G  W   I +E+ +      +  GLG +I
Sbjct: 238 QVLQLSPSQRIFKVILPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFI 291

Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            +  + G   S   +++ VL +     AL+R +
Sbjct: 292 WDEFQNGSSDSIARIMVAVLTIGLIGYALDRLM 324



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 86/198 (43%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    + +         +   ++ +   L PI+ +++ +  L +L    +    +Y
Sbjct: 133 SLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSPLAWLPIVTMIVSAVY 192

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G +  + + +   +    +W    +    + ++ +D   V++  +LS  Q+ + + 
Sbjct: 193 VTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVAQVLQLSPSQRIFKVI 252

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +++  GW  ++A+EM+         PG+G +I    +      +  I
Sbjct: 253 LPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFIWDEFQNGSSDSIARI 306

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A+LT+  + +  D+L+
Sbjct: 307 MVAVLTIGLIGYALDRLM 324


>gi|172035220|ref|YP_001801721.1| bicarbontate transport system permease [Cyanothece sp. ATCC 51142]
 gi|171696674|gb|ACB49655.1| bicarbontate transport system permease protein [Cyanothece sp. ATCC
           51142]
          Length = 280

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A++I I VGI +G +P I+  + P  Q L       + P+ +
Sbjct: 84  LFWQTLASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L 
Sbjct: 200 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254

Query: 559 VLIMCCFVLALNR 571
           V+ +    L L+R
Sbjct: 255 VVYIGAVGLLLDR 267



 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 102/252 (40%), Gaps = 22/252 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---------VHSLPQYA 65
           I P I  +L F+ V  +I++               +   I L             L    
Sbjct: 29  ILPPIVGVLGFLAVWQLISMTGLIKLPPPSSLWTDERTRILLMYPFYDRGGLDKGLFWQT 88

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++ L       L      +   L P+   ++ +  L ++   +V    
Sbjct: 89  LASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIALVALQQ 148

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ + +
Sbjct: 149 NQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILL 200

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A+
Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAV 255

Query: 246 LTMLGVIFLYDQ 257
           + +  V  L D+
Sbjct: 256 VYIGAVGLLLDR 267


>gi|126660803|ref|ZP_01731898.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110]
 gi|126617900|gb|EAZ88674.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110]
          Length = 280

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+I+ I VGI +G +P I+  + P  Q L       + P+ +
Sbjct: 84  LFWQTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L 
Sbjct: 200 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254

Query: 559 VLIMCCFVLALNR 571
           V+ +    L L+R
Sbjct: 255 VVYIGAVGLLLDR 267



 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 105/254 (41%), Gaps = 26/254 (10%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63
           I P I  +L F++V   I++   G+ +   P  +         +             L  
Sbjct: 29  IIPPIVGILGFLIVWQFISM--TGLIKLPPPSSLWTDDRTRTLLMYPFYDRGGLDKGLFW 86

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++ +       L      +   L P+   ++ +  L ++   +V  
Sbjct: 87  QTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIALVAL 146

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ +
Sbjct: 147 QQNQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKI 198

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ 
Sbjct: 199 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 253

Query: 244 AMLTMLGVIFLYDQ 257
           A++ +  V  L D+
Sbjct: 254 AVVYIGAVGLLLDR 267


>gi|307151630|ref|YP_003887014.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306981858|gb|ADN13739.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 279

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+II I VGI +G +P I+  + P  Q L       + P+ +
Sbjct: 83  LFWQTLASLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIAL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++   + W IL N   G    P D+  V     ++  +++  I+
Sbjct: 143 VALQ----QNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L 
Sbjct: 199 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 253

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 254 VIYIGAVGLILDRAI 268



 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 106/256 (41%), Gaps = 26/256 (10%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63
           I P +  +  F+L+   I+ +  G+ +   P  +       + +             L  
Sbjct: 28  IIPPLLGVAGFLLIWQFISTI--GLIKLPPPSSLWTDERTRILLLYPFYDRGGLDKGLFW 85

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++ +       L      +   L PI   ++ +  L ++   +V  
Sbjct: 86  QTLASLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIALVAL 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ +
Sbjct: 146 QQNQP--------AAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKI 197

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ 
Sbjct: 198 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 252

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  V  + D+ +
Sbjct: 253 AVIYIGAVGLILDRAI 268


>gi|290559722|gb|EFD93047.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 379

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 164/399 (41%), Gaps = 33/399 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  RM  A+ +S++         A+S+ L  + +P++D++Q++PIL F  F V  F+
Sbjct: 12  TAYSWTRMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFPFAVYLFV 71

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PG  IG   A IF I TS +WN+ F  YQ++  +P++  ++S+ + L+ +Q+   + 
Sbjct: 72  FDIPGS-IGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQRLKKIF 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL-PGIGSYIALAIKEQDLLAILY 243
           +P ++P +   M +S + G F++V SE+  VG     +  GIG     A    ++   +Y
Sbjct: 131 IPAALPRISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGNVTLYIY 190

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           +++  +  +     L F      +N+F L+               ++K    R I  S  
Sbjct: 191 SIVIFVLFVIATRLLFFENFEKMANRFYLKS--------------YKKRKLERVIFKS-- 234

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
           N          ++  TL   R             ++    +    F  V    I      
Sbjct: 235 NLNKNFITLTGRIKNTLYKNRV------------KKTIKHVSYAIFAFVSAYIIYKLVLI 282

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           + + + +       Y +     +  RV    +    + +P+ +++ F    +       Q
Sbjct: 283 VNFSMLYKLAGYEEYSLLSLAFSFIRVWGAFLAILAVSVPLSVYVVFLSKRTKSYMLTFQ 342

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           ++A+ PA +  P +   V   + N  L   ++      W
Sbjct: 343 IIASIPATILLPAIAYIV---YGNSELLAFIIYFLSGLW 378



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 4/214 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  V      +  R+ + + ++ II +  GI I     ++    P   +L   P   FFP
Sbjct: 5   IFSVFVDTAYSWTRMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFP 64

Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             V    +     +  N  +  L+I    W I+F       A P ++ +++  + +  ++
Sbjct: 65  FAVYLFVFDIPGSIGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQ 124

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG-HIHLRTTGLGAYIAESTEKGS 551
             + I +P   P        +        + SE+ S G   +    G+G     +   G+
Sbjct: 125 RLKKIFIPAALPRISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGN 184

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
               +  ++I   FV+A     +        R  
Sbjct: 185 VTLYIYSIVIFVLFVIATRLLFFENFEKMANRFY 218


>gi|146339483|ref|YP_001204531.1| nitrate transport permease (nrtB) [Bradyrhizobium sp. ORS278]
 gi|146192289|emb|CAL76294.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp.
           ORS278]
          Length = 289

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           RI P +  L  F++V  ++     G       R   D   +  D           L  + 
Sbjct: 37  RIVPPLIVLALFLIVWELLCRRA-GSALPPPSRVFADTRELIFDPFFDHGGIDKGLFWHL 95

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     I+ +      TL  +S      L PI  ++++IP L +L  ++  F +
Sbjct: 96  EASLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 155

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + VW +  +    + NIP+D   V+   +L+  + F  + +
Sbjct: 156 GQP--------SAIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIMI 207

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 208 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 261

Query: 246 LTMLGVIFLYDQLL 259
             +  + F+ D+L+
Sbjct: 262 FYVGIIGFVLDRLI 275



 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   IA+++ + +G  IG        + P  Q+L   P   + PL +
Sbjct: 91  LFWHLEASLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSL 150

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 151 AAFRDGQPS----AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIM 206

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 207 IPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 260

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 261 LFYVGIIGFVLDRLI 275


>gi|332716622|ref|YP_004444088.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3]
 gi|325063307|gb|ADY66997.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3]
          Length = 297

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + +     +++ RV     +A+I  I +G  IG        + P  Q+L   P   +
Sbjct: 94  SQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLRTVPPLAW 153

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL ++       + N     ++   + W ++ N   G    P D++ VA    +    +
Sbjct: 154 LPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQIEF 209

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++      P
Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 263

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++++ +  +      L++ +
Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283



 Score =  160 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 23/259 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HS 60
              +R I P    L   + V  ++     G       +   +   + +            
Sbjct: 40  AAAARNIIPPFVVLAVLLGVWQVLCS-APGSSLPPPSQVFEESYDLIVSPFFHNGSQDIG 98

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L  ++
Sbjct: 99  LGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLRTVPPLAWLPLSL 158

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F +  P        +AIF IF + +W +  +    + NIP+D   V++  RL+  + F
Sbjct: 159 AAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQIEFF 210

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L  
Sbjct: 211 FKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPD 264

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+ A+  +  V F+ D+L+
Sbjct: 265 IIVALAYIGVVGFMLDKLV 283


>gi|299770156|ref|YP_003732182.1| sulfate ester permease protein [Acinetobacter sp. DR1]
 gi|298700244|gb|ADI90809.1| sulfate ester permease protein [Acinetobacter sp. DR1]
          Length = 535

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 93/569 (16%), Positives = 192/569 (33%), Gaps = 72/569 (12%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP----ITLDVHS 60
              P FIS   F ++       L + ++  +    Q                 + +    
Sbjct: 18  TKKPWFISVGYFNSLAIYWIVPLCLFLLWWVASNEQWMPAQILPTPKDTWHSFVEIASQD 77

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + +  R    ++  +L       L   SR     L      +  IP L +L   +
Sbjct: 78  LWSQLAISLERFGLGLLSGVLGGVFLGILLGYSRIAEQYLSATFYALVIIPTLAWLPLLM 137

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K        IF IF + +  +       + +I   L+E++   + +     
Sbjct: 138 IWLGIENSLK--------IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLL 189

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P     + ++++ GW  ++A E++   +      GIG  +    +   L  
Sbjct: 190 TKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSE------GIGYLMVTGRQLFQLDI 243

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           +   +  +  V  ++D +L R          +ER    +P  +   + F K N       
Sbjct: 244 VFVTIFVIASVGIIFDFILHR----------IERKFVFWPHAALSAHTFHKKNRSDVFK- 292

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
              ++  PLS  V     +                            WF ++    +   
Sbjct: 293 ---SWVLPLSLVVLWAVSS----------------------------WFNLISSQILPAP 321

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ +  + +         +      +++R ++ +II  +I   VGI +G    I + + P
Sbjct: 322 WKVLEALWSGI---QDFSLTTAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAP 378

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L       + PL+ +      L+      + +   T + +      G S+ P    
Sbjct: 379 TLNTLRLIAIFAWIPLLTAWFGLEDLSK----IVFISIATFFPMFIATWKGMSSIPMQLV 434

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EV+S+  +T  +    +ILP I P    G   A   +W AS  +E      I     G+G
Sbjct: 435 EVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI-----GIG 489

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +Y+  + +      V+   +++      L
Sbjct: 490 SYMMAAQQNFEMERVIAATVLVAGLGAIL 518



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIW---------LGCITMFRVVV 392
           L I+W   +C   +     +  ++      T +D  +               I++ R  +
Sbjct: 32  LAIYWIVPLCLFLLWWVASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGL 91

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++   +  + +GI +G+       +      L   P   + PL++  +       N   
Sbjct: 92  GLLSGVLGGVFLGILLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIE----NSLK 147

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             ++   T   I  +  AG        KE+A+            ++LP   PY+ TG   
Sbjct: 148 IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRL 207

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A    W + I  E+ +       + G+G  +    +      V + + ++    +  +  
Sbjct: 208 AVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFI 261

Query: 573 LWH 575
           L  
Sbjct: 262 LHR 264



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ V++  + +       +    P  +++ +   +   SL      +  R +  ++I  L
Sbjct: 298 LSLVVLWAVSSWFNLISSQILPAPWKVLEALWSGIQDFSLTTAMYYSLYRAILGLIIGGL 357

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +    + +  +L P L+ ++ I I  ++     +F           +L+ I  
Sbjct: 358 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 409

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  + ++ + +IP  L EVS + R++  Q+   L +P   P +     +++ 
Sbjct: 410 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 469

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W     +E ++         GIGSY+  A +  ++  ++ A + + G+  +   L
Sbjct: 470 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 521


>gi|254447035|ref|ZP_05060502.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [gamma proteobacterium HTCC5015]
 gi|198263174|gb|EDY87452.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [gamma proteobacterium HTCC5015]
          Length = 340

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 18/225 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     +++ V    ++A++I IP+GI  G    ++S + P  Q+   
Sbjct: 115 VRIRDYTGQPTFVDQIFTSLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKP 174

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +++ +       L  ++ +   + W  L N   G S+   D  
Sbjct: 175 VSPLAWLPIVTMVVSAVYVSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLI 234

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 235 NVSRVLRLKWYTKIYKVVLPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 288

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580
            ++ +  + G   S   +++ V  +      L+R   +    + Y
Sbjct: 289 KFVWDEFQNGSSSSLGRIMVAVFTIGFIGFLLDRVMLILQRFFSY 333



 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   + +  +++ L +     L   S ++   L P++ + + +  L +L    +    +Y
Sbjct: 133 SLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVY 192

Query: 128 PGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  E   L +   +    +W    +    + +I  DL  VSR  RL  + K + + 
Sbjct: 193 VSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVV 252

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P +MP +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 253 LPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLGRI 306

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+ T+  + FL D+++ 
Sbjct: 307 MVAVFTIGFIGFLLDRVML 325


>gi|192360346|ref|YP_001980534.1| putative nitrate transport system permease [Cellvibrio japonicus
           Ueda107]
 gi|190686511|gb|ACE84189.1| possible nitrate transport system permease protein [Cellvibrio
           japonicus Ueda107]
          Length = 275

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 11/211 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW+ +          D    I LG  +++RV+    +A  I IPVG  IG  P +   + 
Sbjct: 62  AWEQLSNPFYDAGPNDKGIGIQLGY-SIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALN 120

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+ Q+L       + PL +  +     +       ++   + W +L N   G +    D+
Sbjct: 121 PYIQVLRPISPLAWMPLALFIIKDSETS----AIFVIFICSIWPMLLNTAFGVANVREDW 176

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 177 INVARTHELSPLRTAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGI 230

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G Y+           V+  +L++    + L+
Sbjct: 231 GYYVWNEWNNLDLTSVIFSILMIGLVGMLLD 261



 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L+   ++L        L   S  +   L P + +++ I  L ++   +    
Sbjct: 84  LGYSIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALNPYIQVLRPISPLAWMPLALFIIK 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        +E +AIF IF   +W M  +    + N+  D   V+R+  LS  +  + + 
Sbjct: 144 D--------SETSAIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVI 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG Y+       DL +++++
Sbjct: 196 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFS 249

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  V  L D  L
Sbjct: 250 ILMIGLVGMLLDLAL 264


>gi|117617477|ref|YP_857899.1| nitrate transporter component [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117558884|gb|ABK35832.1| nitrate transporter component [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 314

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 16/214 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V+    +A++I IP G+ +G    +     P  QLL  
Sbjct: 89  VKLRPYTGRPTFFDQIGTSLLTVLCGFGLATLIAIPCGVLLGMNQGLYRAANPVIQLLKP 148

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P++   VS  + +P  WL+       L +   + W  L N   G +    D  
Sbjct: 149 VSPLAWLPIITLVVSALYASPTPWLAKSFLTSALTVTLCSLWPTLINTAVGVAGLDRDLH 208

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++     R I+LPG  P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 209 NVSRVLRLSFVTHVRRIVLPGALPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLG 262

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNR 571
            ++ +  + G   S   +++ V+ +     AL+R
Sbjct: 263 KFVWDEFQSGGSASLARIMVAVITIGLIGCALDR 296



 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 84/210 (40%), Gaps = 14/210 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L +L    ++ L       L   ++ L     P++ +++ +  L +L    +    LY
Sbjct: 107 SLLTVLCGFGLATLIAIPCGVLLGMNQGLYRAANPVIQLLKPVSPLAWLPIITLVVSALY 166

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L +   +    +W    +    +  + RDL  VSR  RLS       + 
Sbjct: 167 ASPTPWLAKSFLTSALTVTLCSLWPTLINTAVGVAGLDRDLHNVSRVLRLSFVTHVRRIV 226

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 227 LPGALPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQSGGSASLARI 280

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSNK 269
           + A++T+  +    D+  L  +  + W  +
Sbjct: 281 MVAVITIGLIGCALDRGMLALQQWLSWDKR 310


>gi|154245032|ref|YP_001415990.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159117|gb|ABS66333.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 362

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 16/217 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     ++  V +  +IA++I +P+GI  G     +  I P  Q+   
Sbjct: 140 VKQRAYTGKPTYVDQIFTSLVTVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKP 199

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +L+P+  +       ++ +   + W  L N   G ++   D  
Sbjct: 200 VSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSLWPTLINTALGVASIDKDLV 259

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V     ++     R ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 260 NVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 313

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW 574
            ++ +  + G   S   +++ VL +      L+R ++
Sbjct: 314 KFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMY 350



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 84/198 (42%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + +    +I+ +        +  S+     + P++ I + +  L +L    +    LY
Sbjct: 158 SLVTVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALY 217

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V  + + +   +    +W    +    + +I +DL  V +  +LS       L 
Sbjct: 218 LDPSAAVPKSLVISAVTVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLV 277

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 278 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARI 331

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A+LT+  + F+ D+++
Sbjct: 332 MVAVLTIGIIGFMLDRIM 349


>gi|260432057|ref|ZP_05786028.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415885|gb|EEX09144.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
          Length = 360

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    +IA++I +P+GI  G  P  ++ + P  Q+   
Sbjct: 138 VKQVAYTGAPSYYQQIWTSIKTVFFGFLIATVIAVPLGIAAGLSPTANAALNPLIQVFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  ++  +       L  ++ +   + W  L N   G ++   D  
Sbjct: 198 VSPLAWLPIVTMIVSAVYVTNDGLFAKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  W     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ V  +      L+R ++    L+ +    
Sbjct: 312 KFVWDEFQNGSSSSLARIMVAVFTIGIIGFLLDRVMYTLQSLFTFTNNR 360



 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128
           +    +I+ +        A  S      L P++ + + +  L +L    +    +Y    
Sbjct: 160 VFFGFLIATVIAVPLGIAAGLSPTANAALNPLIQVFKPVSPLAWLPIVTMIVSAVYVTND 219

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VS+  +++ W K   L +P +
Sbjct: 220 GLFAKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 279

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A+
Sbjct: 280 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLARIMVAV 333

Query: 246 LTMLGVIFLYDQLL 259
            T+  + FL D+++
Sbjct: 334 FTIGIIGFLLDRVM 347


>gi|332529362|ref|ZP_08405323.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
 gi|332041160|gb|EGI77525.1| nitrate ABC transporter, inner membrane subunit [Hylemonella
           gracilis ATCC 19624]
          Length = 325

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+++ IPVG  IG    +S    P   LL       + P+ +
Sbjct: 127 VGWNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLPIGL 186

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA    ++ W+    I+
Sbjct: 187 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITKIL 242

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 243 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 296

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    L L   L  
Sbjct: 297 IVMIGVVGLLLEIALIR 313



 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       L  +   L  +  PI+ +++ +  L +L   ++ 
Sbjct: 129 WNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLPIGLLV 188

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R  +LS W+    
Sbjct: 189 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITK 240

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 241 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 294

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A++ +  V  L +  L R    ++
Sbjct: 295 IAIVMIGVVGLLLEIALIRLASAFT 319


>gi|332306314|ref|YP_004434165.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173643|gb|AEE22897.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 329

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +            +++ V V  +IAS+I +P+GI  G      + I P  QLL       
Sbjct: 109 FTGAPTFFDQIWTSLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLA 168

Query: 433 FFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + PLV   VS  +++ +       +  ++ +     W  L N   G S+  +D   V+  
Sbjct: 169 WLPLVTMVVSAVYVSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKV 228

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +  +     I++P   P   TG   + G  W   I +E+ +      +  GLG ++ +
Sbjct: 229 LRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWD 282

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   +++ VL +     AL+R +
Sbjct: 283 EFQNGSSESLARIMVAVLTIGLIGFALDRLM 313



 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +I+ +       +   S+     + P++ +++ +  L +L    +    +Y
Sbjct: 122 SLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + +   +    +W    +    + +I  DL  VS+  RL  +     + 
Sbjct: 182 VSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIV 241

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + F  D+L+ 
Sbjct: 296 MVAVLTIGLIGFALDRLML 314


>gi|218441576|ref|YP_002379905.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218174304|gb|ACK73037.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 279

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+II I VGI +G +P I+  + P  Q L       + P+ +
Sbjct: 83  LFWQTLASLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIAL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++     W IL N   G    P D+  V     ++  +++  I+
Sbjct: 143 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L 
Sbjct: 199 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 253

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 254 VIYIGAVGLILDRAI 268



 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 107/256 (41%), Gaps = 26/256 (10%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63
           I P +  +  F+LV  +I+ +  GI +   P  +       + +             L  
Sbjct: 28  IIPPLVGVAGFLLVWQLISSV--GIIKLPPPSSLWTDERTRILLLYPFYDRGGLDKGLFW 85

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++ +       L      +   L PI   ++ +  L ++   +V  
Sbjct: 86  QTLASLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIALVAL 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        AAIF IF + VW +  +  + +  IP+D   V +  +LS  + F+ +
Sbjct: 146 QQNQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKI 197

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ 
Sbjct: 198 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 252

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  V  + D+ +
Sbjct: 253 AVIYIGAVGLILDRAI 268


>gi|17230370|ref|NP_486918.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120]
 gi|17131972|dbj|BAB74577.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120]
          Length = 279

 Score =  160 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +    A+++ I +GI IG    +S  + P  QLL   P   + P+ +
Sbjct: 81  LFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPISL 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G    P D+  VA    ++   ++  I+
Sbjct: 141 AALR----QNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNIL 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +     E++L 
Sbjct: 197 IPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISEIILA 251

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L++ +
Sbjct: 252 LVYIGAVGLLLDKLM 266



 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 91/201 (45%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+      + +       +   ++ +   L P+  +++++P L ++  
Sbjct: 79  KGLFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPI 138

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++       P        AA+F IF + +W +  +    +  IP+D   V++  +LS  +
Sbjct: 139 SLAALRQNEP--------AALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKE 190

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A +   +
Sbjct: 191 YFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYI 245

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V  L D+L+
Sbjct: 246 SEIILALVYIGAVGLLLDKLM 266


>gi|186682670|ref|YP_001865866.1| nitrate ABC transporter inner membrane subunit [Nostoc punctiforme
           PCC 73102]
 gi|186465122|gb|ACC80923.1| nitrate ABC transporter, inner membrane subunit [Nostoc punctiforme
           PCC 73102]
          Length = 279

 Score =  160 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +G+ IG    +S  + P  QLL   P   + P+ +
Sbjct: 81  LFWQILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVPPLAWVPISL 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W IL N   G +  P D+  VA    ++   ++  I+
Sbjct: 141 AALR----QNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I ++ +  +  EV+L 
Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILA 251

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L++ +
Sbjct: 252 LVYIGVVGLLLDKAM 266



 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 107/255 (41%), Gaps = 24/255 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---------HSLPQY 64
            + P    +  F+++  +   +         P  ++    + +             L   
Sbjct: 27  DLIPPAIAISIFLVLWQLFAWVPGAT--LPGPIQVIQDTWVLIFWPFYDRGGIDKGLFWQ 84

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+  +  ++ +       L   ++ +   L PI  +++++P L ++  ++    
Sbjct: 85  ILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVPPLAWVPISLAALR 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+F IF + +W +  +    +  IP+D   V++  +LS  + F  + 
Sbjct: 145 QNEP--------AALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A +  ++  ++ A
Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNNVSEVILA 251

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  V  L D+ +
Sbjct: 252 LVYIGVVGLLLDKAM 266


>gi|330501505|ref|YP_004378374.1| putative nitrate transport system permease [Pseudomonas mendocina
           NK-01]
 gi|328915791|gb|AEB56622.1| possible nitrate transport system permease protein [Pseudomonas
           mendocina NK-01]
          Length = 278

 Score =  160 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IP+G  IG  P +   + PF Q+L       + PL +  +    
Sbjct: 90  SLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       ++   + W +L N   G +    D+  VA +  ++  R    +I+P   P 
Sbjct: 150 TS----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMPT 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+   G      TG+G Y+       +   V+  +L++   
Sbjct: 206 ILTGMRISVGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIGVV 259

Query: 566 VLALNRFL 573
            + L+  L
Sbjct: 260 GMLLDLLL 267



 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+  +++ L       +   S  +   L P + I++ I  L ++   +    
Sbjct: 87  LAHSLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIK 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        ++ +AIF IF   VW M  +    +  + RD   V+R+  LS  +  + + 
Sbjct: 147 D--------SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVI 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP +MP ++  M +S+   W  +VA+EM+V G       GIG Y+       +L +++++
Sbjct: 199 VPAAMPTILTGMRISVGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLNLASVIFS 252

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  V  L D LL
Sbjct: 253 ILMIGVVGMLLDLLL 267


>gi|296112268|ref|YP_003626206.1| nitrate ABC transporter permease protein NrtB [Moraxella
           catarrhalis RH4]
 gi|295919962|gb|ADG60313.1| nitrate ABC transporter permease protein NrtB [Moraxella
           catarrhalis RH4]
 gi|326560738|gb|EGE11106.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 46P47B1]
 gi|326561778|gb|EGE12113.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 7169]
 gi|326562282|gb|EGE12608.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 103P14B1]
 gi|326564740|gb|EGE14953.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 12P80B1]
 gi|326568997|gb|EGE19066.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC1]
 gi|326569297|gb|EGE19358.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC7]
 gi|326574534|gb|EGE24475.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis CO72]
 gi|326575485|gb|EGE25410.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis 101P30B1]
 gi|326577899|gb|EGE27763.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis O35E]
          Length = 294

 Score =  160 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW  I          D    I LG  ++ RV++   +A I+ IP+G  IG  P + S   
Sbjct: 81  AWVHISDPFYDKGLNDKGIGIQLGY-SIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAAT 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + P+ +  +     + N     ++   + W +L N   G ++   ++
Sbjct: 140 PFVQILKPISPLAWMPIALYTIK----DSNASSIFVIFICSIWPMLTNTAFGVASVRREW 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA +  ++  +    I++P   P  VTG   + G AW   + +E+   G      TG+
Sbjct: 196 RNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++       S   V+  VL++    + L+   
Sbjct: 250 GYFVWNQWNNLSLANVIFAVLLIGLMGMILDMLF 283



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L+   +      +  R+L    ++++           S  LG    P + I++ I  L 
Sbjct: 93  GLNDKGIGIQLGYSIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPISPLA 152

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   +          +  +  ++IF IF   +W M  +    + ++ R+   V+++  L
Sbjct: 153 WMPIALY--------TIKDSNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLEL 204

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P + P +V  M +SM   W  +VA+EM+V G       GIG ++     
Sbjct: 205 SPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWN 258

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              L  +++A+L +  +  + D L 
Sbjct: 259 NLSLANVIFAVLLIGLMGMILDMLF 283


>gi|120553119|ref|YP_957470.1| binding-protein-dependent transport systems inner membrane
           component [Marinobacter aquaeolei VT8]
 gi|120322968|gb|ABM17283.1| binding-protein-dependent transport systems inner membrane
           component [Marinobacter aquaeolei VT8]
          Length = 330

 Score =  160 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y      +     ++  V+    +AS+I +P+GI  G   +  + + P  Q+   
Sbjct: 110 VRIRAYPGAPTFLDQVVTSLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKP 169

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +       L   + +   + W  L N   G +A   D  
Sbjct: 170 VSPLAWLPLVTMVVSATYVSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLL 229

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    ++ W   R ++LP   P   TG   + G AW   I +E+ +      ++ GLG
Sbjct: 230 NVSRVLRLSFWTHVRKVVLPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLG 283

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   +++ VL +      L+R +
Sbjct: 284 KFVWDEFQNGSSQSLSRIMVAVLAIGFIGFLLDRVM 319



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 14/209 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L +L+   ++ L       +   +R     + P++ I + +  L +L    +     Y
Sbjct: 128 SLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKPVSPLAWLPLVTMVVSATY 187

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L ++  +    +W    +    +  +  DL  VSR  RLS W     + 
Sbjct: 188 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVV 247

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 248 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGSSQSLSRI 301

Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSN 268
           + A+L +  + FL D+  LL +  + W+ 
Sbjct: 302 MVAVLAIGFIGFLLDRVMLLIQRKVAWNE 330


>gi|149201150|ref|ZP_01878125.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149145483|gb|EDM33509.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 356

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    +IA+ + +P+GI  G  P  ++ + P  Q+   
Sbjct: 134 VRERPYTGSPTYYAQIWTSVQTVFFGFLIATAVAVPLGIAAGLSPTANAALNPLIQIFKP 193

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  ++  +       L  ++ +   + W  L N   G ++   D  
Sbjct: 194 VSPLAWLPIVTMVVSAVYVTQDGLFSRSFLTSAITVTLCSLWPTLINTSLGVASIDRDLI 253

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +T W     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 254 SVSRVLKLTTWTKITRLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 307

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ V  +      L+R ++    L+ +    
Sbjct: 308 KFVWDEFQNGSSTSLAKIMVAVFTIGIIGFLLDRLMYAAQSLFTFSDNR 356



 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    +I+          A  S      L P++ I + +  L +L    +    +Y
Sbjct: 152 SVQTVFFGFLIATAVAVPLGIAAGLSPTANAALNPLIQIFKPVSPLAWLPIVTMVVSAVY 211

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G    + L +   +    +W    +    + +I RDL  VSR  +L+ W K   L 
Sbjct: 212 VTQDGLFSRSFLTSAITVTLCSLWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLV 271

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 272 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSTSLAKI 325

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A+ T+  + FL D+L+
Sbjct: 326 MVAVFTIGIIGFLLDRLM 343


>gi|114705670|ref|ZP_01438573.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Fulvimarina pelagi HTCC2506]
 gi|114538516|gb|EAU41637.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Fulvimarina pelagi HTCC2506]
          Length = 364

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 16/202 (7%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++  V +  ++A+II +PVGI  G    I+  + P  Q+        + P+V   V
Sbjct: 156 QIMTSLQTVFLGFLLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIV 215

Query: 442 SYYHLNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           S  ++N +  L       ++ +   + W  L N   G ++   D   V     ++  +  
Sbjct: 216 SALYVNASDALPKSMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTI 275

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---S 551
             ++LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S
Sbjct: 276 TKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDS 329

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              +++ V+ +      L+R +
Sbjct: 330 LARIIVAVITIGIVGFILDRIM 351



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +    +++ +           S  +   L P++ I + +  L +L    +    
Sbjct: 158 MTSLQTVFLGFLLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIVSA 217

Query: 126 LYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           LY      +  + + +   +    +W    +    + +I +DL  V +  +LS  +    
Sbjct: 218 LYVNASDALPKSMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITK 277

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239
           L +P +MP +   + +S+  GW  ++A+EM+         PG+G ++    +      L 
Sbjct: 278 LVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLA 331

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++T+  V F+ D+++
Sbjct: 332 RIIVAVITIGIVGFILDRIM 351


>gi|16262759|ref|NP_435552.1| nitrate ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|14523389|gb|AAK64964.1| Nitrate transporter, permease [Sinorhizobium meliloti 1021]
          Length = 297

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     ++        TL  +S      L PI  +++++P L +L  
Sbjct: 97  QGLFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F +  P        +AIF IF + +W +  +    + NIP+D + V++  RL+ ++
Sbjct: 157 SLAAFQDGTP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFE 208

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 209 YFGKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V FL D+L+
Sbjct: 263 SDIIVALIYVGIVGFLLDRLI 283



 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+ + + +G  +G        + P  Q+L   P   + PL +
Sbjct: 99  LFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++     W I+ N   G    P D++ VA    +  + ++  I+
Sbjct: 159 AAFQDGTPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIM 214

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       ++++ 
Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 269 LIYVGIVGFLLDRLI 283


>gi|32470875|ref|NP_863868.1| nitrate transport permease protein [Rhodopirellula baltica SH 1]
 gi|32443020|emb|CAD71541.1| nitrate transport permease protein [Rhodopirellula baltica SH 1]
          Length = 371

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 19/229 (8%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            ++ +       +FT       I     ++  V     +A+I+ +PVG+  G  P  ++ 
Sbjct: 134 ALSLKKRAVAAANFTPSSAPTFIDQIWTSVKTVFFGFFLATIVAVPVGVLCGMSPWFNAA 193

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFN 467
           + PF Q+        + PL    + +Y+   +   +            +   + W  L N
Sbjct: 194 MTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLVN 253

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G ++   DF  VA    ++ W+    IILP   P    G   + G  W   I +++ 
Sbjct: 254 TTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADML 313

Query: 528 SWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRFL 573
           +      +  GLG ++ +  + GS   +  +   V+++    L L+R +
Sbjct: 314 A------QNPGLGKFVWDEFQNGSELTYARIAFSVIVIGLIGLVLDRIM 356



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 17/208 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     ++ +       L   S      + P + I + +  L +L    +  M  Y G  
Sbjct: 166 VFFGFFLATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYS 225

Query: 132 IG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            G      A L +   +    +W    +    + ++ +D   V+   RLS WQ+   + +
Sbjct: 226 SGETFFNKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIIL 285

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAIL 242
           P S+P +   M +S+  GW  ++A++M+         PG+G ++    +         I 
Sbjct: 286 PASLPLMFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIA 339

Query: 243 YAMLTMLGVIFLYDQLL--FRPMIVWSN 268
           ++++ +  +  + D+++  FR ++ + N
Sbjct: 340 FSVIVIGLIGLVLDRIMIFFRNLVSFGN 367


>gi|254487030|ref|ZP_05100235.1| nitrate ABC transporter, permease component [Roseobacter sp.
           GAI101]
 gi|214043899|gb|EEB84537.1| nitrate ABC transporter, permease component [Roseobacter sp.
           GAI101]
          Length = 357

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 18/211 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V    +IAS++ IP+GI  G     ++ + P  Q+        + P+V   VS  +
Sbjct: 153 SIKTVFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVY 212

Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
            + +       L  ++ +   + W  L N   G S+   D   V+    +  W     ++
Sbjct: 213 ASNDGMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLV 272

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S  ++
Sbjct: 273 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 326

Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           ++ V  +      L+R ++    ++ +    
Sbjct: 327 MVAVFTIGIIGFLLDRVMFALQSMFTFSANR 357



 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I+ L        A  S+     L P++ I + +  L +L    +    +Y    
Sbjct: 157 VFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYASND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ W K   L +P +
Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAV 330

Query: 246 LTMLGVIFLYDQLLF 260
            T+  + FL D+++F
Sbjct: 331 FTIGIIGFLLDRVMF 345


>gi|326571973|gb|EGE21978.1| nitrate ABC transporter, inner membrane subunit [Moraxella
           catarrhalis BC8]
          Length = 294

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW  I          D    I LG  ++ RV++   +A I+ IP+G  IG  P + S   
Sbjct: 81  AWVHISDPFYDKGLNDKGIGIQLGY-SIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAAT 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + P+ +  +     + N     ++   + W +L N   G ++   ++
Sbjct: 140 PFVQILKPISPLAWMPIALYTIK----DSNASSIFVIFICSIWPMLTNTAFGVASVRREW 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA +  ++  +    I++P   P  VTG   + G AW   + +E+   G      TG+
Sbjct: 196 RNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++       S   V+  VL++    + L+   
Sbjct: 250 GYFVWNQWNNLSLANVIFAVLLIGLMGMILDMLF 283



 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L+   +      +  R+L    ++++           S  LG    P + I++ I  L 
Sbjct: 93  GLNDKGIGIQLGYSIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPISPLA 152

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   +          +  +  ++IF IF   +W M  +    + ++ R+   V+++  L
Sbjct: 153 WMPIALY--------TIKDSNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLEL 204

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P + P +V  M +SM   W  +VA+EM+V G       GIG ++     
Sbjct: 205 SPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWN 258

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              L  +++A+L +  +  + D L 
Sbjct: 259 NLSLANVIFAVLLIGLMGMILDMLF 283


>gi|242238796|ref|YP_002986977.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242130853|gb|ACS85155.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 564

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 85/530 (16%), Positives = 166/530 (31%), Gaps = 71/530 (13%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +       V    ++L    LP +   +  R+   ++  +L   +   L   SRR   +L
Sbjct: 86  QILPAPQQVVATAVSLLQGDLPSHLLISLQRLGGGLLAGVLAGTLLGALMGASRRAEQLL 145

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +  +  IP LG++ F +V F      K+          +  + +  +T    + + +
Sbjct: 146 YPTVYTLAQIPTLGWIPFFMVLFGIDDGLKLA--------VLIKAVIVPVTLHSQRGVRD 197

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P  L E +   RL    +   L +P ++P     + +++S  W  ++  E++       
Sbjct: 198 VPPTLREAAAVLRLPLPTRLLRLTLPAALPVWFTGLRLALSQAWVSLIVVELLASSQ--- 254

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
              GIG  +    +   L  +   +  +     L +                        
Sbjct: 255 ---GIGYLMVWGRQLFQLDIVFVCIAAIGATGLLMEW----------------------- 288

Query: 281 ADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340
                          RF  +      +P+        R    +        L   S  R 
Sbjct: 289 ------------GINRFDHHLIRWPHAPVGRLTHTPGRPAIGLMLPLLLLVLWHLSCSRD 336

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
                  W       A  +  Q++   V   T  D          ++FR +   II    
Sbjct: 337 -------WVDATLLPAPALVVQTLWRGVLDGTLPD------AMLHSLFRALTGGIIGVST 383

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
               GI +G      +   P   LL       + PL+ +       N        +    
Sbjct: 384 GWLAGIALGLSTRAEALFAPSLSLLRQVALFAWLPLITAWAG----NDEGGKVTFVALAA 439

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + +L     G        +EVA    +      R +ILPG  P   TG   +   AW  
Sbjct: 440 FFPMLVASHRGVRQRSAALQEVAQILRLPLSARLRVLILPGAAPAMFTGLRLSLIHAWLG 499

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +E            G+G+ +  + +    P ++ G+L++    + L+
Sbjct: 500 TVGAEYFMSSG-----AGIGSLMINAQQLMEMPIILSGMLLIGLTGVLLD 544


>gi|227819750|ref|YP_002823721.1| Nitrate transport permease NrtB [Sinorhizobium fredii NGR234]
 gi|227338749|gb|ACP22968.1| Nitrate transport permease protein NrtB [Sinorhizobium fredii
           NGR234]
          Length = 297

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     ++         L  +S      L PI  +++++P L +L  
Sbjct: 97  QGLFWHVFASLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F +  P        +AIF IF + +W +  +    + NIP+D + V+R  RL+G++
Sbjct: 157 SLAAFQDGNP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFE 208

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 209 YFAKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V FL D+L+
Sbjct: 263 SDIIVALIYVGIVGFLLDRLI 283



 Score =  159 bits (402), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 83/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+ + I +G+ +G        + P  Q+L   P   + PL +
Sbjct: 99  LFWHVFASLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +     + +       ++     W I+ N   G    P D++ VA    + G+ ++  I+
Sbjct: 159 AAFQDGNPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFEYFAKIM 214

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       ++++ 
Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 269 LIYVGIVGFLLDRLI 283


>gi|149926963|ref|ZP_01915221.1| possible nitrate transport system permease protein [Limnobacter sp.
           MED105]
 gi|149824184|gb|EDM83404.1| possible nitrate transport system permease protein [Limnobacter sp.
           MED105]
          Length = 282

 Score =  160 bits (404), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  I          D    I LG  ++FRV+V   +A+++ IP+G  IG  P +   + 
Sbjct: 69  LWGHISDPFYDRGTNDKGIGIQLGY-SIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALD 127

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     +       ++   + W +L N   G +    D+
Sbjct: 128 PFIQILKPVSPLAWMPLALYTIQDSDTS----AIFVIFICSIWPMLVNTAFGVAGVRRDW 183

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 184 LNVAKTLEVSSLRTAFQVILPAAAPTIMTGMRISVGIAWLVIVAAEMLVGG------TGI 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G ++       S   ++  +L +    + L+  L  
Sbjct: 238 GYFVWNEWNNLSIANIISAILFIGLIGMLLDTLLAR 273



 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L    ++ L       +   S  L   L P + I++ +  L ++   +    
Sbjct: 91  LGYSIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALDPFIQILKPVSPLAWMPLALYTIQ 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        ++ +AIF IF   +W M  +    +  + RD   V+++  +S  +  + + 
Sbjct: 151 D--------SDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVI 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  I+ A
Sbjct: 203 LPAAAPTIMTGMRISVGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIANIISA 256

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  +  L D LL R
Sbjct: 257 ILFIGLIGMLLDTLLAR 273


>gi|13472532|ref|NP_104099.1| nitrate transporter component, nrtB [Mesorhizobium loti MAFF303099]
 gi|14023278|dbj|BAB49885.1| nitrate transporter component; NrtB [Mesorhizobium loti MAFF303099]
          Length = 298

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 111/292 (38%), Gaps = 23/292 (7%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           ++ I  +    F   +   + +       R   P       ++  V  ++ I    VV  
Sbjct: 3   IQAIEDTKVKAFPAPAKPAEVIAFAAKARRRFDPLAIAGKLASTLVPPVIVIALMLVVWQ 62

Query: 355 VAIGI----------AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIW 401
           VA              W     ++ H  +      + + W   I++ RV +   +A+I+ 
Sbjct: 63  VACSSPTSSLPPPSQVWNEAYDLIAHPFFDNGPQDIGLAWRVLISLQRVAIGFGLAAIVG 122

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G  +G        + P  Q+L   P   + PL ++       + +     ++   + 
Sbjct: 123 VALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLSLAAFR----DSSPSALFVIFITSI 178

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I+ N   G    P D++ VA    +  + ++  I++P   PY  TG     G +W A 
Sbjct: 179 WPIIINTAVGVRNIPQDYRNVARILRLNPFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAI 238

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +E+ + G       G+G +I ++      P++++ +  +      L+R +
Sbjct: 239 VAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 284



 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +       L  +S      L P+  I++++P L +L  +
Sbjct: 99  GLAWRVLISLQRVAIGFGLAAIVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 158

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +A+F IF + +W +  +    + NIP+D   V+R  RL+ ++ 
Sbjct: 159 LAAFRDSSP--------SALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPFEF 210

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + VP + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 211 FVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 264

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +    F  D+L+
Sbjct: 265 DIIVALAYIGVTGFCLDRLV 284


>gi|282898853|ref|ZP_06306840.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281196380|gb|EFA71290.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 279

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 10/214 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ I Y        D   + W    ++ RV +   +A+++ I +GI IG    +S  + 
Sbjct: 64  TWELIIYPFYDRGGIDKG-LFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALD 122

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  QLL   P   + P+ ++ +             ++   + W IL N   G    P D+
Sbjct: 123 PLFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITSLWPILINTAVGVKEIPVDY 178

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA    ++   ++  +++P   PY  TG   + G AW A I +E+   G +     G+
Sbjct: 179 NNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GI 233

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++ +     EV+L ++ +    L L++F+
Sbjct: 234 GFFIWDAYQANKVSEVILALVYIGVVGLLLDKFM 267



 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 118/265 (44%), Gaps = 22/265 (8%)

Query: 4   YNILPPFISRR---IFPNIFDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLD 57
            N++  FI+++   I P    ++AF++V  + +++   L G  +       + I P    
Sbjct: 16  ENLILAFINKKMPEIIPPFIAIVAFLVVWQVFSLVGGTLPGPIQVVQDTWELIIYPFYDR 75

Query: 58  VH---SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L      +  R+  +  ++ +       L   +  +   L P+  +++++P L 
Sbjct: 76  GGIDKGLFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVPPLA 135

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++  ++       P        AA+F IF + +W +  +    +  IP D   V++  +L
Sbjct: 136 WVPISLAALRQNEP--------AALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQL 187

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  + F+ + +P ++P +   + +S+   W  ++A+E+++ G     + GIG +I  A +
Sbjct: 188 SQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQ 242

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              +  ++ A++ +  V  L D+ +
Sbjct: 243 ANKVSEVILALVYIGVVGLLLDKFM 267


>gi|37521656|ref|NP_925033.1| bicarbonate transport system permease protein [Gloeobacter
           violaceus PCC 7421]
 gi|35212654|dbj|BAC90028.1| cmpB [Gloeobacter violaceus PCC 7421]
          Length = 278

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+ + I VGI IG    I S + P  Q+L   P   + P+ +
Sbjct: 82  LFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPISL 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++     W I+ N   G    P D+  VA    ++  +++  ++
Sbjct: 142 AAIQ----QSEPAAIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVL 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+VL 
Sbjct: 198 LPAALPYIFTGLKIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSAKVSEIVLA 251

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L++ +
Sbjct: 252 LVYVGLVGLLLDKLV 266



 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +  R+     ++     V   L   +  +   L P+  ++++IP L +L  
Sbjct: 80  QGLFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPI 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++       P        AAIF IF + +W +  +    +  IP+D   V+R  +LS  +
Sbjct: 140 SLAAIQQSEP--------AAIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPK 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 192 YFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAYNSAKV 245

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V  L D+L+
Sbjct: 246 SEIVLALVYVGLVGLLLDKLV 266


>gi|110833713|ref|YP_692572.1| nitrate ABC transporter permease [Alcanivorax borkumensis SK2]
 gi|110646824|emb|CAL16300.1| nitrate ABC transporter permease protein [Alcanivorax borkumensis
           SK2]
          Length = 333

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y            ++  V+   ++AS+I IP+GI IG      + + P  QL        
Sbjct: 113 YTGAPTFFDQIGTSLITVMSGFLLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLA 172

Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + PLV   VS  ++  +  ++         +     W  L N   G ++   D   V+  
Sbjct: 173 WLPLVTMVVSALYVTDDPMVAKSFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLV 232

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +      R I+LP   P   TG   + G AW   I +E+ +      +  GLG ++ +
Sbjct: 233 LRLNALSHIRKIVLPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWD 286

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   +++ V+++      L+R +
Sbjct: 287 EFQNGSSQSLGRIMVAVIVIGLIGFLLDRLM 317



 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + ++S  +++ L       +   S      + P++ + + +  L +L    +    LY
Sbjct: 126 SLITVMSGFLLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLAWLPLVTMVVSALY 185

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V  + L ++F +    +W    +    + ++ +DL  VS   RL+       + 
Sbjct: 186 VTDDPMVAKSFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLVLRLNALSHIRKIV 245

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P ++P +   + +S+   W  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 246 LPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 299

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A++ +  + FL D+L+ 
Sbjct: 300 MVAVIVIGLIGFLLDRLML 318


>gi|253687824|ref|YP_003017014.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754402|gb|ACT12478.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 537

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 87/549 (15%), Positives = 179/549 (32%), Gaps = 71/549 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA + +  I         +     ++V    + L  + L      +  R+ S ++  LL 
Sbjct: 41  LALLALWYISTHYGWMPAQILPAPNVVANTAVELWHNDLLPQLFISLQRLASGLLAGLLA 100

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L   SRR   +L P +  +  IP LG++   +V F      K+          I
Sbjct: 101 GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 152

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  +T      + N+P  L+EV+ + RL   Q+   L +P ++P  +  + +++S 
Sbjct: 153 IKAVIIPVTLHTQTGVRNVPHALQEVAHTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 212

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  ++  E++          GIG  +    +   L  +   +  +       +      
Sbjct: 213 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLAME------ 260

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322
                                W +    +           +    PLS       R L  
Sbjct: 261 ---------------------WTINQLERR--------LVFWPHPPLSRLTAAPSRRLSA 291

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +   F    L   +++         W   +        W  +   V+  +  + +     
Sbjct: 292 LVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLRQGVHDGSLTEAMQ---- 340

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R +   +   +  +  G+ +G      +   P    L       + PL+ + V 
Sbjct: 341 --ASLTRALAGAVCGIVAGLVGGVLLGLSATSDALFTPTVATLRQIALFAWLPLLTAWVG 398

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               N        +   + + +L     G        +EVA    +      R +ILPG 
Sbjct: 399 ----NDEAGKITFVTLASFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLILPGA 454

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G   +   AW  +I +E           TG+G+ +  + +    P ++ G+L++
Sbjct: 455 APAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLI 509

Query: 563 CCFVLALNR 571
                 L+R
Sbjct: 510 GLTGAVLDR 518



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+  ++   +   SL +    +  R L+  V  ++   V   L   S     +  
Sbjct: 316 LPPPADVWHMLRQGVHDGSLTEAMQASLTRALAGAVCGIVAGLVGGVLLGLSATSDALFT 375

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +   
Sbjct: 376 PTVATLRQIALFAWLPLLTAWVGNDEAGKITFVTLASFF--------PMLVASHRGIRQR 427

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L+EV++  +L    +   L +P + P +   + +S+   W   + +E  +   T   
Sbjct: 428 SQALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 484

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             GIGS +  A +  D+  I+  ML +     + D++   L + M  W
Sbjct: 485 --GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGLGLEQRMTRW 530



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 87/260 (33%), Gaps = 28/260 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL----------- 377
            N        R   ++      +V  + + +A  ++ YI  H+ +               
Sbjct: 11  ANIWPALPTARAYSLVVPRIVSLVVPLIVPLALLALWYISTHYGWMPAQILPAPNVVANT 70

Query: 378 -------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   ++    I++ R+   ++   +    +G  +G        + P    LA  P 
Sbjct: 71  AVELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHLLHPTVYALAQIPT 130

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          +     ++I      +  +   G    P+  +EVA +  +  
Sbjct: 131 LGWIPLFMVLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVAHTLRLPW 186

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P ++TG   A   AW + IV E+ +       + G+G  +    +  
Sbjct: 187 HQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLF 240

Query: 551 SFPEVVLGVLIMCCFVLALN 570
               V + + ++    LA+ 
Sbjct: 241 QLDIVFVCIAVIGLAGLAME 260


>gi|16330083|ref|NP_440811.1| nitrate transport protein NrtB [Synechocystis sp. PCC 6803]
 gi|2501376|sp|P73451|NRTB_SYNY3 RecName: Full=Nitrate transport permease protein nrtB
 gi|1652570|dbj|BAA17491.1| nitrate transport protein; NrtB [Synechocystis sp. PCC 6803]
          Length = 275

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 10/192 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ RV V    A+++ I +GI IG    +   + P  Q+L   P   + P+ ++ +
Sbjct: 81  QIFASLTRVAVGFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAAL 140

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +       ++     W I+ N   GA   P D++ V+    ++  +++  I+ P 
Sbjct: 141 QEAEPS----AIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPA 196

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             PY  TG     G +W A + +E+   G       G+G +I ++       E+++ ++ 
Sbjct: 197 AVPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSSLISEIIIALIY 250

Query: 562 MCCFVLALNRFL 573
           +    L L+RF+
Sbjct: 251 VGIVGLLLDRFI 262



 Score =  157 bits (397), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 22/245 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74
           +A +LV+  I     G    +  + +    P+ L+           L      +  R+  
Sbjct: 32  IAVLLVVWQILCSGEGSNLPSPVQVLEQTYPLILNPFFDNGGTDKGLGIQIFASLTRVAV 91

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
               + +       L   S+ +   L PI  ++++IP L +L   +       P      
Sbjct: 92  GFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQEAEP------ 145

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +AIF IF + +W +  +       +P+D   VSR  +LS  Q F+ +  P ++P +  
Sbjct: 146 --SAIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVPYIFT 203

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A++ +  V  L
Sbjct: 204 GLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAYNSSLISEIIIALIYVGIVGLL 257

Query: 255 YDQLL 259
            D+ +
Sbjct: 258 LDRFI 262


>gi|282896008|ref|ZP_06304039.1| Nitrate transport permease [Raphidiopsis brookii D9]
 gi|281199118|gb|EFA73988.1| Nitrate transport permease [Raphidiopsis brookii D9]
          Length = 279

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 10/214 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ I Y        D   + W    ++ RV +   +A+++ I +GI IG    +S  + 
Sbjct: 64  TWELIIYPFYDRGGIDKG-LFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALD 122

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  QLL   P   + P+ ++ +             ++   + W IL N   G    P D+
Sbjct: 123 PLFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITSLWPILINTAVGVKEIPVDY 178

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA    ++   ++  +++P   PY  TG   + G AW A I +E+   G +     G+
Sbjct: 179 NNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GI 233

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I +S +     EV+L ++ +    L L++F+
Sbjct: 234 GFFIWDSYQANKVSEVILALVYIGVVGLLLDKFM 267



 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 110/251 (43%), Gaps = 19/251 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVH---SLPQYASRT 68
           I P +  ++AF++V  + ++    L G  +       + I P          L      +
Sbjct: 30  ILPPLIAIVAFLVVWQVFSLTGGTLPGPIQVVQDTWELIIYPFYDRGGIDKGLFWQVFAS 89

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+  +  ++ +       L   +  +   L P+  +++++P L ++  ++       P
Sbjct: 90  LQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEP 149

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   AA+F IF + +W +  +    +  IP D   V++  +LS  + F+ + +P +
Sbjct: 150 --------AALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAA 201

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + +S+   W  ++A+E+++ G     + GIG +I  + +   +  ++ A++ +
Sbjct: 202 LPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQANKVSEVILALVYI 256

Query: 249 LGVIFLYDQLL 259
             V  L D+ +
Sbjct: 257 GVVGLLLDKFM 267


>gi|192290788|ref|YP_001991393.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192284537|gb|ACF00918.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 279

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ I          D    I LG  ++ RV+   ++A ++ IP+G  IG  P ++
Sbjct: 62  VGAKLWEHIKRPFYDNGPNDKGLGIQLGY-SIARVMTGYLLAVLVAIPLGFLIGMSPLMN 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270



 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 93/205 (45%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R+++  ++++L       L   S  +   L P + +++ I  L ++
Sbjct: 80  NDKGLGIQLGYSIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + L+AIF IF   VW M  +    + ++ ++   V+R+  +  
Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            ++ ++ A+L +  V  L DQ+L R
Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270


>gi|85704275|ref|ZP_01035378.1| putative nitrate transporter [Roseovarius sp. 217]
 gi|85671595|gb|EAQ26453.1| putative nitrate transporter [Roseovarius sp. 217]
          Length = 358

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 18/211 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V    +IA+++ +P+GI  G  P  ++ + P  Q+        + P+V   VS   
Sbjct: 154 SIQTVFFGFLIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALA 213

Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
            + +       +  ++ +   + W  L N   G ++   D   V+    +  W     ++
Sbjct: 214 ASNDGVFAKSFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLV 273

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG +I +  + G   S   +
Sbjct: 274 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARI 327

Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           ++ VL +      L+R ++    L+ +    
Sbjct: 328 MVAVLSIGIIGFLLDRVMYALQSLFTFTNNR 358



 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 84/198 (42%), Gaps = 12/198 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL- 126
           +   +    +I+ +        A  S      L P++ I + +  L +L    +    L 
Sbjct: 154 SIQTVFFGFLIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALA 213

Query: 127 --YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G    + + +   +    +W    +    + +I +DL  VS+  +++ W K   L 
Sbjct: 214 ASNDGVFAKSFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLV 273

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P ++P +   + +S+  GW  ++A+EM+         PG+G +I    +      L  I
Sbjct: 274 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARI 327

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + A+L++  + FL D+++
Sbjct: 328 MVAVLSIGIIGFLLDRVM 345


>gi|327542553|gb|EGF29027.1| nitrate ABC transporter permease protein [Rhodopirellula baltica
           WH47]
          Length = 371

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 19/229 (8%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            ++ +       +FT       I     ++  V     +A+I+ +PVG+  G  P  ++ 
Sbjct: 134 ALSLKKRAVAAANFTPSSAPTFIDQIWTSVKTVFFGFFLATIVAVPVGVLCGMSPWFNAA 193

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFN 467
           + PF Q+        + PL    + +Y+   +   +            +   + W  L N
Sbjct: 194 MTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLVN 253

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G ++   DF  VA    ++ W+    IILP   P    G   + G  W   I +++ 
Sbjct: 254 TTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADML 313

Query: 528 SWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRFL 573
           +      +  GLG ++ +  + GS   +  +   V+++    L L+R +
Sbjct: 314 A------QNPGLGKFVWDEFQNGSELTYARIAFSVIVIGMIGLVLDRIM 356



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 17/208 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     ++ +       L   S      + P + I + +  L +L    +  M  Y G  
Sbjct: 166 VFFGFFLATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYS 225

Query: 132 IG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            G      A L +   +    +W    +    + ++ +D   V+   RLS WQ+   + +
Sbjct: 226 SGETFFNKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIIL 285

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAIL 242
           P S+P +   M +S+  GW  ++A++M+         PG+G ++    +         I 
Sbjct: 286 PASLPLMFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIA 339

Query: 243 YAMLTMLGVIFLYDQLL--FRPMIVWSN 268
           ++++ +  +  + D+++  FR ++ + N
Sbjct: 340 FSVIVIGMIGLVLDRIMIFFRNLVSFGN 367


>gi|260426707|ref|ZP_05780686.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260421199|gb|EEX14450.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 394

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    +I S + IP+GI  G  P+ +S I P  Q+   
Sbjct: 172 VKDVAYTGAPSYYEQIWTSIKTVFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKP 231

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   +S      +       L  ++ +   + W  L N   G ++   D  
Sbjct: 232 VSPLAWLPIVTMIISAAVATNDGLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLV 291

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  W     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 292 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 345

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ V  +      L+R ++    L+ +    
Sbjct: 346 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMFALQSLFTFSNNR 394



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 12/195 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYP 128
           +    +I          LA  S      + P++ I + +  L +L    +     +    
Sbjct: 194 VFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATND 253

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VS+  +++ W K   L +P +
Sbjct: 254 GLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 313

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A+
Sbjct: 314 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKIMVAV 367

Query: 246 LTMLGVIFLYDQLLF 260
            T+  + FL D+++F
Sbjct: 368 FTIGIIGFLLDRVMF 382


>gi|260464097|ref|ZP_05812291.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259030082|gb|EEW31364.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 296

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           A+  I +   +   QD+  + W   I++ RV +   +A+++ + +G  +G        + 
Sbjct: 80  AYDLIAHPFFNNGPQDIG-LAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLD 138

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + +     ++   + W I+ N   G    P D+
Sbjct: 139 PVFQILRTVPPLAWLPLSLAAFR----DSSPSALFVIFITSIWPIIINTAVGVRNIPQDY 194

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +    ++  I++P   PY  TG     G +W A + +E+ + G       G+
Sbjct: 195 RNVARILRLNPLEFFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGI 248

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +      L+R +
Sbjct: 249 GFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 282



 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +       L  +S      L P+  I++++P L +L  +
Sbjct: 97  GLAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +A+F IF + +W +  +    + NIP+D   V+R  RL+  + 
Sbjct: 157 LAAFRDSSP--------SALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPLEF 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + VP + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 209 FIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 262

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +    F  D+L+
Sbjct: 263 DIIVALAYIGVTGFCLDRLV 282


>gi|188584197|ref|YP_001927642.1| nitrate ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347695|gb|ACB83107.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           populi BJ001]
          Length = 286

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 23/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           ++ R+ P +  L  F+L+  ++             R + +   I +D           L 
Sbjct: 31  VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIVDPFYDNGGTDKGLF 89

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            + S +  R+     ++++   +  TL  +S      L PI  ++++IP L +L  ++  
Sbjct: 90  WHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAA 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + F+ 
Sbjct: 150 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYK 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+
Sbjct: 202 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 255

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  + F+ D+L+
Sbjct: 256 VALVYVGLIGFVLDRLV 272



 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL +
Sbjct: 88  LFWHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSL 147

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 148 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKIM 203

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 204 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 257

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 258 LVYVGLIGFVLDRLV 272


>gi|226942957|ref|YP_002798030.1| ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226717884|gb|ACO77055.1| ABC transporter, permease component [Azotobacter vinelandii DJ]
          Length = 528

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/553 (13%), Positives = 170/553 (30%), Gaps = 73/553 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               L   + +      ++   P  +V    + L    L ++   +  R+   ++  +  
Sbjct: 32  AGIFLAWSLASHFGWMSRQVLPPPSLVWQTLLELGGGELWEHLGISLRRLALGLLAGVAA 91

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       + RL  +  P    +  +P L ++   +++F           E   +  +
Sbjct: 92  GALLGATLGANARLERLAYPTFASLAQVPTLAWIPLFMLFFGIG--------EALKLVVL 143

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + V  +T      + +    L E +   RL+   + W L VP ++P  +  + +++S 
Sbjct: 144 IKAVVVPVTVHTLVGVRDTQPRLREAAAVLRLAPHLRLWRLTVPAALPSFMAGLRIALST 203

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LL 259
            W  ++A E++   +      GIG  +    +   L  +   +L +  +  L D+   LL
Sbjct: 204 AWSSLLAVELLASSE------GIGYLMVWGRQLFMLDIVFVCILAIGLLGVLMDKGIALL 257

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
            R ++ W +                 L  FR+ +                   + +L  +
Sbjct: 258 DRRLLFWPH---------------PPLAEFRRRHIKSDWQRLEPWLLPLALLGLWQLACS 302

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
              I  +     + +  +          W  ++ G       +S+G  +        L +
Sbjct: 303 RQWIDANILVAPIAVLHS---------IWSGLLDGSLGEALARSLGRALGGLLLGGGLGL 353

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                + ++R                            + P   +L       + PL+ +
Sbjct: 354 AMGILLGLWR-----------------------PGERLLGPTLGVLRHVAIFAWVPLITA 390

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                         + + F T + +      G +       E A    +        ++L
Sbjct: 391 WFGLGEA----AKLVFVAFATFFPLFIATRRGIANLSPQLDEAARVLRLNHRLRLTRLVL 446

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G   A   AW  +I +E            G+G+ +  + +      ++  +
Sbjct: 447 PGAAPAIFAGLRLALIYAWLGTIGAEYFMPSD-----GGIGSLMIAAQQLFQMDRIMAAM 501

Query: 560 LIMCCFVLALNRF 572
            ++      +N  
Sbjct: 502 SLIGLTGALINTL 514



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 90/230 (39%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++  +   L   SL +  +R+  R L  +++          L    R    +L 
Sbjct: 311 LVAPIAVLHSIWSGLLDGSLGEALARSLGRALGGLLLGGGLGLAMGILLGLWRPGERLLG 370

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +++ + I  ++     +F      K++    A  F +F         +  + + N+
Sbjct: 371 PTLGVLRHVAIFAWVPLITAWFGLGEAAKLVFVAFATFFPLF--------IATRRGIANL 422

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L+E +R  RL+   +   L +P + P +   + +++   W   + +E  +  D    
Sbjct: 423 SPQLDEAARVLRLNHRLRLTRLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSD---- 478

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I+ AM  +     L + L  + +   + ++R
Sbjct: 479 -GGIGSLMIAAQQLFQMDRIMAAMSLIGLTGALINTL-GQLIEARATRWR 526


>gi|145589179|ref|YP_001155776.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047585|gb|ABP34212.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 286

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ RV +  ++A I+ IP G WIG  P       PF Q+L       + P+ +
Sbjct: 91  IGIQLAYSLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPISPLAWMPIAL 150

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +  +    ++   + W +L N   G +    +   VA +  ++  R    +I
Sbjct: 151 YTIK----DSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVI 206

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   + G AW   + +E+   G      TG+G ++       S   V+  
Sbjct: 207 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFLWNEWNNLSLSSVIFA 260

Query: 559 VLIMCCFVLALN 570
           +L++    + L+
Sbjct: 261 ILLIGIVGMLLD 272



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+    +++++    +      S        P + I++ I  L ++   +    
Sbjct: 95  LAYSLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPISPLAWMPIALY--- 151

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + ++ IF IF   VW M  +    + N+ ++L  V+++  +S  +K + + 
Sbjct: 152 -----TIKDSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVI 206

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L ++++A
Sbjct: 207 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFLWNEWNNLSLSSVIFA 260

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  L D    +
Sbjct: 261 ILLIGIVGMLLDTAFGK 277


>gi|171060512|ref|YP_001792861.1| nitrate ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777957|gb|ACB36096.1| nitrate ABC transporter, inner membrane subunit [Leptothrix
           cholodnii SP-6]
          Length = 331

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W++   + +   Y +      + W    ++ RV +   +A+++ IP+G  IG    ++ 
Sbjct: 115 VWEAAVKLFSDPFYSNGPNDQGIGWNVLSSLQRVAMGFGLAALVGIPLGFMIGRFNFLNQ 174

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P   LL       + P+ +          N      +   + W ++ N   G    P
Sbjct: 175 MLDPLISLLRPVSPLAWLPIGLMVFQAA----NPAAIWTIFICSIWPMVINTAVGVRQVP 230

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++ W   R I+ P + PY +TG   A G AW   + +E+ + G      
Sbjct: 231 QDYLNVARVLELSEWTVMRKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGQ----- 285

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G ++ +     +   +++ + ++    LAL   L
Sbjct: 286 -GIGFWLWDEWNNLNVAHILIAIFVIGGVGLALEALL 321



 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 21/253 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYAS 66
           ++         F+L+   +++          P     +   +        +   +     
Sbjct: 83  KVLAPAVGFALFLLLWQAVSLAGDKQLPGPAPVWEAAVKLFSDPFYSNGPNDQGIGWNVL 142

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       +  +   L  +L P++ +++ +  L +L   ++ F   
Sbjct: 143 SSLQRVAMGFGLAALVGIPLGFMIGRFNFLNQMLDPLISLLRPVSPLAWLPIGLMVFQAA 202

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W     +  P
Sbjct: 203 NP--------AAIWTIFICSIWPMVINTAVGVRQVPQDYLNVARVLELSEWTVMRKILFP 254

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  IL A+ 
Sbjct: 255 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGGQ------GIGFWLWDEWNNLNVAHILIAIF 308

Query: 247 TMLGVIFLYDQLL 259
            + GV    + LL
Sbjct: 309 VIGGVGLALEALL 321


>gi|83309635|ref|YP_419899.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82944476|dbj|BAE49340.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 368

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 89/224 (39%), Gaps = 18/224 (8%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +      +     ++  V +  ++A+I+ +P+G+  G    I++ + P  Q+        
Sbjct: 151 FTGKPTYLDQIATSLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLA 210

Query: 433 FFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + P+V   VS  + +         L  ++ +   + W  L N   G ++   D   V   
Sbjct: 211 WLPIVTMVVSASYTSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRV 270

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            ++      R +++P   P+  TG   + G  W   I +E+ +      +  GLG ++ +
Sbjct: 271 LNLPMRTTIRKLVMPSSLPFIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWD 324

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
             + G   S  ++++ VL +      L+R +     L+ +    
Sbjct: 325 EFQNGSSQSLAKIMVAVLTIGLIGFLLDRVMLACQALFSHSATR 368



 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +    V++ +       +   S+ +   L P++ I + +  L +L    +     Y
Sbjct: 164 SLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIVTMVVSASY 223

Query: 128 PGKVIGAELA---AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  E A   +   +    +W    +    + +I +DL  V R   L        L 
Sbjct: 224 TSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPMRTTIRKLV 283

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241
           +P S+P +   M +S+  GW  ++A+EM+         PG+G ++    +    Q L  I
Sbjct: 284 MPSSLPFIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 337

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A+LT+  + FL D+++ 
Sbjct: 338 MVAVLTIGLIGFLLDRVML 356


>gi|289549090|ref|YP_003474078.1| nitrate ABC transporter inner membrane protein [Thermocrinis albus
           DSM 14484]
 gi|289182707|gb|ADC89951.1| nitrate ABC transporter, inner membrane subunit [Thermocrinis albus
           DSM 14484]
          Length = 274

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +  +I S + +P+G+++G    + +   P  Q L       +FP+ +
Sbjct: 81  IGWQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWFPIGL 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +     H          +   + W  L N   GAS+ P D++ VA  F  + W + RY++
Sbjct: 141 AIFQASH----QAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVV 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+ +TG   + G AW   + +E+ + G      TG+G YI +S       +V+  
Sbjct: 197 LPYTLPFILTGLKISMGIAWMVIVAAEMLAGG------TGIGFYIWDSWNALDLRKVISA 250

Query: 559 VLIMCCFVLALN 570
           +LI+    L L+
Sbjct: 251 LLIIGIVGLVLD 262



 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+    +I                +L  +  PI+  ++ +  L + 
Sbjct: 77  NDKGIGWQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWF 136

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F          +  AA+F I  + +W    +      ++P D   V++ F  S 
Sbjct: 137 PIGLAIFQA--------SHQAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSR 188

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W    Y+ +P+++P ++  + +SM   W  +VA+EM+  G       GIG YI  +    
Sbjct: 189 WTYLRYVVLPYTLPFILTGLKISMGIAWMVIVAAEMLAGGT------GIGFYIWDSWNAL 242

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           DL  ++ A+L +  V  + D +  +
Sbjct: 243 DLRKVISALLIIGIVGLVLDSVFGK 267


>gi|254441535|ref|ZP_05055028.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 307]
 gi|198251613|gb|EDY75928.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 307]
          Length = 276

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 11/215 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  AW+ +          D    I +G  +++RV+    +A++I IP+G  IG      
Sbjct: 59  VLVKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLTGYFMAALIAIPLGFLIGMSTVAY 117

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 118 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 173

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D+  VA +  ++ ++    +ILP   P  VTG   + G AW   + +E+   G     
Sbjct: 174 REDWVNVARTHELSAFKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 228

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TG+G Y+           V+  +L++    + L+
Sbjct: 229 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 262



 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L+   ++ L       L   S      L P + +++ I  L ++   +    +
Sbjct: 86  GYSIYRVLTGYFMAALIAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFVIQD 145

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  +  D   V+R+  LS ++  + + +
Sbjct: 146 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVIL 197

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 198 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 251

Query: 246 LTMLGVIFLYDQLL 259
           L +  V  L D  L
Sbjct: 252 LMIGVVGMLLDSAL 265


>gi|39935182|ref|NP_947458.1| nitrate transport system permease [Rhodopseudomonas palustris
           CGA009]
 gi|39649033|emb|CAE27554.1| possible nitrate transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 279

 Score =  158 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ I          D    I LG  ++ RV+   ++A ++ IP+G  IG  P ++
Sbjct: 62  VGAKLWEHIKRPFYDNGPNDKGLGIQLGY-SIARVMTGYLLAVLVAIPLGFLIGMSPLMN 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 93/205 (45%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R+++  ++++L       L   S  +   L P + +++ I  L ++
Sbjct: 80  NDKGLGIQLGYSIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + L+AIF IF   VW M  +    + ++ ++   V+R+  +  
Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            ++ ++ A+L +  V  L DQ+L R
Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270


>gi|325122247|gb|ADY81770.1| sulfate ester permease protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 481

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 86/516 (16%), Positives = 179/516 (34%), Gaps = 68/516 (13%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + +    L    + +  R    ++  +L       L   SR     L      +  IP L
Sbjct: 17  VEIASQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTL 76

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +++       K        IF IF + +  +       + +I   L+E++   +
Sbjct: 77  AWLPLLMIWLGIENSLK--------IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQ 128

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +       L +P ++P     + ++++ GW  ++A E++   +      GIG  +    
Sbjct: 129 FNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSE------GIGYLMVTGR 182

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
           +   L  +   +  +  V  ++D +L R          +ER    +P  +   + F K N
Sbjct: 183 QLFQLDIVFVTIFVIASVGIIFDFILHR----------IERKFVFWPHAALSAHTFHKKN 232

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
                     ++  PLS  V     +                            WF ++ 
Sbjct: 233 RSDVFK----SWVLPLSLVVLWAVSS----------------------------WFNLIS 260

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +   W+ +  + +         +      +++R ++ +II  +I   VGI +G    
Sbjct: 261 SQILPAPWKVLEALWSGI---QDFSLTTAMYYSLYRAILGLIIGGLIGASVGIVVGLFKP 317

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           I + + P    L       + PL+ +      L+      + +   T + +      G S
Sbjct: 318 IENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSK----IVFISIATFFPMFIATWKGMS 373

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    EV+S+  +T  +    +ILP I P    G   A   +W AS  +E      I 
Sbjct: 374 SIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI- 432

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               G+G+Y+  + +      V+   +++      L
Sbjct: 433 ----GIGSYMMAAQQNFEMERVIAATVLVAGLGAIL 464



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R  + ++   +  + +G+ +G+       +      L   P   + PL++  +  
Sbjct: 29  AISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGI 88

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N     ++   T   I  +  AG        KE+A+            ++LP   
Sbjct: 89  E----NSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 144

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY+ TG   A    W + I  E+ +       + G+G  +    +      V + + ++ 
Sbjct: 145 PYFFTGLRLAVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIA 198

Query: 564 CFVLALNRFLWH 575
              +  +  L  
Sbjct: 199 SVGIIFDFILHR 210



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ V++  + +       +    P  +++ +   +   SL      +  R +  ++I  L
Sbjct: 244 LSLVVLWAVSSWFNLISSQILPAPWKVLEALWSGIQDFSLTTAMYYSLYRAILGLIIGGL 303

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +    + +  +L P L+ ++ I I  ++     +F           +L+ I  
Sbjct: 304 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 355

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  + ++ + +IP  L EVS + R++  Q+   L +P   P +     +++ 
Sbjct: 356 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 415

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W     +E ++         GIGSY+  A +  ++  ++ A + + G+  +   L
Sbjct: 416 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 467


>gi|16332005|ref|NP_442733.1| hypothetical protein slr0041 [Synechocystis sp. PCC 6803]
 gi|81672180|sp|Q55461|CMPB_SYNY3 RecName: Full=Bicarbonate transport system permease protein CmpB
 gi|1001317|dbj|BAA10804.1| unknown protein [Synechocystis sp. PCC 6803]
          Length = 280

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 9/193 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+I+ I  GI +G +P +   + P  Q L       + P+ +
Sbjct: 84  LFWQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMVAPLAWVPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++   + W IL N   G    P D+  V     ++  +++  I+
Sbjct: 144 VALQ----QNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKIL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG   A G AW A I +E+   G +     G+G +I ++ ++    E++L 
Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254

Query: 559 VLIMCCFVLALNR 571
           V  +    L L+R
Sbjct: 255 VFYIGAVGLLLDR 267



 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 22/253 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIIN-----ILLHGIQETTVPRDIVDIVPITLDVHSLP----QY 64
            I P IF +L F+L+  +I+      L       T PR    ++    D   L       
Sbjct: 28  DILPPIFGILGFLLLWQLISSAGLIKLPPPSSLWTDPRTRTLLMYPFYDQGGLDKGLFWQ 87

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     ++ +       L      L   L PI   ++ +  L ++   +V   
Sbjct: 88  TLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMVAPLAWVPIALVALQ 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AAIF IF + VW +  +  + +  IP+D   V +  RLS  + F+ + 
Sbjct: 148 QNQP--------AAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKIL 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +++   W  ++A+E+++ G     + GIG +I  A ++  +  I+ A
Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILA 254

Query: 245 MLTMLGVIFLYDQ 257
           +  +  V  L D+
Sbjct: 255 VFYIGAVGLLLDR 267


>gi|50120492|ref|YP_049659.1| putative sulfate ester transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611018|emb|CAG74463.1| putative sulfate ester transporter, permease component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 529

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 89/552 (16%), Positives = 181/552 (32%), Gaps = 77/552 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA + +            +     +IV    + L  + L      +  R++  ++  LL 
Sbjct: 33  LALLALWYTSTHYGWMPAQILPAPNIVANTAVELWHNDLLPQLFISLQRLVGGLLAGLLA 92

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L   SRR   +L P +  +  IP LG++   +V F      K+          I
Sbjct: 93  GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 144

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  +T      + N+P  L+EV+R+ RL   Q+   L +P + P  +  + +++S 
Sbjct: 145 IKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLTLPAAFPTWLTGLRLALSQ 204

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
            W  ++  E++          GIG  +    +   L  +   +  +       + L   L
Sbjct: 205 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLTMEWLINQL 258

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
            R ++ W +                                       PLS       R 
Sbjct: 259 ERRLVFWPH--------------------------------------PPLSQLTTTPSRK 280

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L  +   F    L   +++         W   +        W  +   ++  +  + +  
Sbjct: 281 LSALVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGIHDGSLPEAMQ- 332

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R +   +   +  +  G+ +G      +   P    L       + PL+ +
Sbjct: 333 -----ASLTRALAGAVCGIVAGLVGGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTA 387

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V     N        +   + + +L     G        +EVA    +      R +IL
Sbjct: 388 WVG----NDEAGKITFVALASFFPMLVASHRGIRQRSQALQEVALVLQLRLSTRLRVLIL 443

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G   +   AW  +I +E           TG+G+ +  + +    P ++ G+
Sbjct: 444 PGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGM 498

Query: 560 LIMCCFVLALNR 571
           L++      L+R
Sbjct: 499 LLIGLMGAVLDR 510



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+  ++   +   SLP+    +  R L+  V  ++   V   L   +     +  
Sbjct: 308 LPPPADVWHMLLQGIHDGSLPEAMQASLTRALAGAVCGIVAGLVGGVLLGLNATSDALFT 367

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  ++ I +  +L     +  N   GK+    LA+ F         M  + ++ +   
Sbjct: 368 PTVATLRQIALFAWLPLLTAWVGNDEAGKITFVALASFF--------PMLVASHRGIRQR 419

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L+EV+   +L    +   L +P + P +   + +S+   W   + +E  +   T   
Sbjct: 420 SQALQEVALVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 476

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLE 273
             GIGS +  A +  D+  I+  ML +  +  + D++   L + M  W +   +E
Sbjct: 477 --GIGSLMINAQQLLDMPLIISGMLLIGLMGAVLDRVGLGLEQRMTRWRSAGEIE 529



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++ R+V  ++   +    +G  +G        + P    LA  P   + PL +
Sbjct: 71  LLPQLFISLQRLVGGLLAGLLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFM 130

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +     ++I      +  +   G    P+  +EVA +  +   +    + 
Sbjct: 131 VLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLT 186

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP  FP ++TG   A   AW + IV E+ +       + G+G  +    +      V + 
Sbjct: 187 LPAAFPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLFQLDIVFVC 240

Query: 559 VLIMCCFVLALNRFL 573
           + ++    L +   +
Sbjct: 241 IAVIGLAGLTMEWLI 255


>gi|90415462|ref|ZP_01223396.1| putative nitrate transporter [marine gamma proteobacterium
           HTCC2207]
 gi|90332785|gb|EAS47955.1| putative nitrate transporter [marine gamma proteobacterium
           HTCC2207]
          Length = 333

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            +++ V+   ++A+ I IP+GI  G   +    I P  Q    
Sbjct: 108 VKVRPYTGKATYFDQIFTSLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKP 167

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +       L     +     W  + N I G ++   D  
Sbjct: 168 VSPLAWLPLVTMVVSALYVSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLI 227

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +V+    ++   + + I++P   P   TG   +    W   I +E+ +      +  GLG
Sbjct: 228 DVSRVLRLSSPVYIKTIVIPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLG 281

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            +I +  + G   S   +++ V+ +      L++ +
Sbjct: 282 KFIWDEFQNGSSSSLGRIMVAVITIGIIGFILDQLM 317



 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 12/199 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   ++   +++         L   S      + PI+   + +  L +L    +    LY
Sbjct: 126 SLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKPVSPLAWLPLVTMVVSALY 185

Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    A L + F +    +W    +    + +I RDL +VSR  RLS       + 
Sbjct: 186 VSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLIDVSRVLRLSSPVYIKTIV 245

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P + P +   + +S++ GW  ++A+EM+         PG+G +I    +      L  I
Sbjct: 246 IPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLGRI 299

Query: 242 LYAMLTMLGVIFLYDQLLF 260
           + A++T+  + F+ DQL+ 
Sbjct: 300 MVAVITIGIIGFILDQLML 318


>gi|121610891|ref|YP_998698.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|121555531|gb|ABM59680.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
          Length = 295

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 11/202 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ RV +   IA+++ IP+G  +G  P +   + PF Q+L       + PL +
Sbjct: 100 IGIQLGYSLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLAL 159

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     + ++    ++   + W +L N   G ++   D+   A +  +   R    +I
Sbjct: 160 YTIK----DSSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVI 215

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   + G AW   + +E+   G      TG+G Y+       S   V+  
Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLSLTSVIFA 269

Query: 559 VLIMCCFVLALNRFLWHPLYLY 580
           +L++    + L+  ++  L   
Sbjct: 270 ILLIGVTGMLLD-LVFARLQKL 290



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     I+ +       L   S  +   L P + I++ I  L ++   +    
Sbjct: 104 LGYSLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLALY--- 160

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + ++ IF IF   VW M  +    + ++ RD    +++  +   +K + + 
Sbjct: 161 -----TIKDSSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVI 215

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG Y+        L ++++A
Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLSLTSVIFA 269

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +     L D +  R
Sbjct: 270 ILLIGVTGMLLDLVFAR 286


>gi|115526626|ref|YP_783537.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115520573|gb|ABJ08557.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 279

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ I          D    I LG  ++ RV++  +IA  + IP+G  IG  P ++
Sbjct: 62  VGAKLWEHIQRPFYDNGPNDKGLGIQLGY-SIARVMIGYLIAVAVAIPLGFLIGMSPLMN 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +    L+       ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIKDSGLS----AIFVIFICSVWPMLLNTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILMIGVVGMLLDQILAR 270



 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 23/238 (9%)

Query: 33  NILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFT 83
               HG      P D+   +   +         +   L      +  R++   +I++   
Sbjct: 47  ATATHGKSAMPGPLDVGAKLWEHIQRPFYDNGPNDKGLGIQLGYSIARVMIGYLIAVAVA 106

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L   S  +   L P + +++ I  L ++   +          +  + L+AIF IF
Sbjct: 107 IPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALY--------TIKDSGLSAIFVIF 158

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++  M +S+   
Sbjct: 159 ICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIA 218

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  +VA+EM+V G       GIG ++        +  ++ A+L +  V  L DQ+L R
Sbjct: 219 WLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILMIGVVGMLLDQILAR 270


>gi|154246444|ref|YP_001417402.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160529|gb|ABS67745.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
          Length = 298

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + + W   +++ RV V   +A+++ I VG  IG        + P  Q+L   P   +
Sbjct: 95  PQDIGLGWRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAW 154

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ ++       + N     ++     W ++ N   G    P D++ VA    +    +
Sbjct: 155 LPIALAAFR----DSNPSAIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEF 210

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++      P
Sbjct: 211 FWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 264

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++++ ++ +      L+R +
Sbjct: 265 DIIVALVYIGVVGFVLDRLV 284



 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L   
Sbjct: 99  GLGWRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPIA 158

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + 
Sbjct: 159 LAAFRDSNP--------SAIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEF 210

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 211 FWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 264

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F+ D+L+
Sbjct: 265 DIIVALVYIGVVGFVLDRLV 284


>gi|294053878|ref|YP_003547536.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
 gi|293613211|gb|ADE53366.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
          Length = 542

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 76/236 (32%), Gaps = 34/236 (14%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y   + V      ++F V +  I A+II IPVGI  G      + + P   +       V
Sbjct: 306 YAKAMTVYLQIKRSLFTVFIGFITAAIIAIPVGILCGLSRIAMACLTPIISIFKPVSPVV 365

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMI-----------------------FGTQWYILFNVI 469
           +  +    V  +  +P      L                             W  L N  
Sbjct: 366 WLLIFQIVVGAFFPDPESHPFFLFFNSLPIIGGLGINPALIFSACTVAMCAVWPALVNTA 425

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G ++   D   VA    +  W     II+P   P    G   + G  W   I +E  S 
Sbjct: 426 LGVASIDKDHINVARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMVLIAAEALS- 484

Query: 530 GHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580
                 + GLG ++ +  + G   SF  ++    ++      L+R   +   L  +
Sbjct: 485 -----SSDGLGKFVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMMIILQRLVSF 535



 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 87/224 (38%), Gaps = 30/224 (13%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R+   +    + + +       L   SR     L PI+ I + +  + +L    +     
Sbjct: 318 RSLFTVFIGFITAAIIAIPVGILCGLSRIAMACLTPIISIFKPVSPVVWLLIFQIVVGAF 377

Query: 127 YPGKV----------------IGAELAAIF---AIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +P                   +G   A IF    +    VW    +    + +I +D   
Sbjct: 378 FPDPESHPFFLFFNSLPIIGGLGINPALIFSACTVAMCAVWPALVNTALGVASIDKDHIN 437

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V+R  RL+ W++   + +P +MP +   + +S+  GW  ++A+E +   D      G+G 
Sbjct: 438 VARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMVLIAAEALSSSD------GLGK 491

Query: 228 YIALAIKEQ---DLLAILYAMLTMLGVIFLYDQ--LLFRPMIVW 266
           ++    +         ILYA   +  + F+ D+  ++ + ++ +
Sbjct: 492 FVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMMIILQRLVSF 535


>gi|192289974|ref|YP_001990579.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283723|gb|ACF00104.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 538

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 70/563 (12%), Positives = 171/563 (30%), Gaps = 70/563 (12%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P ++       +   +A + +  +         +      +V      L   +L    + 
Sbjct: 30  PAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPALVWQTAGELLADNLLSNLAI 89

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L    ++ L           SRR+   + P    +  +P L ++ F ++      
Sbjct: 90  SLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIALVQVPTLAWIPFLMMVLGLG- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   +  I  + V  +    +  + ++   L E +R  RL  +++   + +P 
Sbjct: 149 -------EALKVVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRILRLGFFRRLGSVILPA 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +  + + ++ GW  +VA E++   +      GIG  +    +   L  +   +L 
Sbjct: 202 ALPAFLTGLRLGLAQGWTSLVAVELLASSE------GIGFLMVWGRQLFQLDVVFVCILV 255

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           +  V  + D                                      L  +  ++  +  
Sbjct: 256 IGIVGLVMD------------------------------------RGLNVVDRAAVRWPR 279

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P     +       ++ + FP   L   +    S  +          V   +        
Sbjct: 280 PALAEHRTARGGYRLLSWLFPAGLLAAWAAASASGAISPTMLPSPAAVLSVLGHGLADGS 339

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                            +++ R  + + + +     VG+ +G    +          L  
Sbjct: 340 FET-----------AMGLSLQRAFIGLALGAGSGFAVGLAMGLNRPLDRLFNGTLAALRL 388

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL+ + V     +        +   + + +      G +       E + +  
Sbjct: 389 VAIFAWIPLLTAWVGLGEASK----ITFVAIASFFPMQLAAYRGVATLSPHLIEASWTLR 444

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G    R ++LPGI P    G   A    W  ++ +E            G+G+ +  + 
Sbjct: 445 LGGSDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFM-----PSGGGIGSLMIGAQ 499

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           +      V+  ++++      LN
Sbjct: 500 QMFRTDVVLAAMVMIGVVAALLN 522



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 84/268 (31%), Gaps = 18/268 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AWQSIG 365
               R   V  F     F      +  + +  +    ++   ++             +  
Sbjct: 10  DYPPRGAAVAGFRTLPRFGVPAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPA 69

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +           ++    I++ R++    +A++    +G  +G    + + I P    L
Sbjct: 70  LVWQTAGELLADNLLSNLAISLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIAL 129

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P ++  +        + +   ++      ++     G         E    
Sbjct: 130 VQVPTLAWIPFLMMVLGLGEALKVVVIIKAVVT----PVVIYTHVGVRDVDPKLLEATRI 185

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +  +R    +ILP   P ++TG        W + +  E+ +       + G+G  +  
Sbjct: 186 LRLGFFRRLGSVILPAALPAFLTGLRLGLAQGWTSLVAVELLA------SSEGIGFLMVW 239

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +      V + +L++    L ++R L
Sbjct: 240 GRQLFQLDVVFVCILVIGIVGLVMDRGL 267



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++ ++   L   S       +  R    + +     F        +R L  +  
Sbjct: 321 LPSPAAVLSVLGHGLADGSFETAMGLSLQRAFIGLALGAGSGFAVGLAMGLNRPLDRLFN 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L  ++ + I  ++     +       K+    +A+ F         M  + Y+ +  +
Sbjct: 381 GTLAALRLVAIFAWIPLLTAWVGLGEASKITFVAIASFF--------PMQLAAYRGVATL 432

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E S + RL G  +   L +P   P +   + +++   W   + +E  +       
Sbjct: 433 SPHLIEASWTLRLGGSDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFMPSG---- 488

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +      ++ A + M+GV+      +   +   + ++R
Sbjct: 489 -GGIGSLMIGAQQMFR-TDVVLAAMVMIGVVAALLNAIGSRIEARATRWR 536


>gi|84684440|ref|ZP_01012341.1| putative nitrate transporter [Maritimibacter alkaliphilus HTCC2654]
 gi|84667419|gb|EAQ13888.1| putative nitrate transporter [Rhodobacterales bacterium HTCC2654]
          Length = 361

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 17/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    +            ++  V    +I S I IP+GI  G  P  ++ I P  Q+   
Sbjct: 138 VKDIPFTGAPSYYDQIWTSIKTVFFGFLIGSAIAIPLGIVAGLSPIANAAINPIVQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
                + P+V   VS               +  ++ +   + W  L N   G S+   D 
Sbjct: 198 VSPLAWLPIVTMIVSALAAEGTDGLLPKSFIISAITVTLCSLWPTLINTSLGVSSIDKDL 257

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             V+    +  W     ++LP   P   TG   + G  W   I +E+ +      +  GL
Sbjct: 258 VSVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 311

Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW 574
           G ++ +  + G   S   +++ V  +      L+R ++
Sbjct: 312 GKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMF 349



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 13/196 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I          +A  S      + PI+ I + +  L +L    +    L     
Sbjct: 160 VFFGFLIGSAIAIPLGIVAGLSPIANAAINPIVQIFKPVSPLAWLPIVTMIVSALAAEGT 219

Query: 129 -GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G +  + + +   +    +W    +    + +I +DL  VS+  +++ W K   L +P 
Sbjct: 220 DGLLPKSFIISAITVTLCSLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPS 279

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYA 244
           ++P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A
Sbjct: 280 ALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVA 333

Query: 245 MLTMLGVIFLYDQLLF 260
           + T+  + FL D+++F
Sbjct: 334 VFTIGIIGFLLDRVMF 349


>gi|170741903|ref|YP_001770558.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           sp. 4-46]
 gi|168196177|gb|ACA18124.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           sp. 4-46]
          Length = 288

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 94/201 (46%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     ++ +   +  TL  +S      L PI  ++++IP L +L  
Sbjct: 88  KGLFWHIVASLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++
Sbjct: 148 SLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFE 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 200 FFGKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHI 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  + F+ D+++
Sbjct: 254 SEIIVALVYVGVIGFVLDRVV 274



 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +AS+  + +G  +G        + P  Q+L   P   + PL +
Sbjct: 90  LFWHIVASLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSL 149

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VAS   +  + ++  I+
Sbjct: 150 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIM 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 206 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 259

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 260 LVYVGVIGFVLDRVV 274


>gi|316934735|ref|YP_004109717.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
 gi|315602449|gb|ADU44984.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 279

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ I +        D    I LG  ++ RV++  ++A  + IP+G  IG  P ++
Sbjct: 62  VGAKLWEHIKHPFYDNGPNDKGLGIQLGY-SIARVMIGYLLAVAVAIPLGFLIGMSPLMN 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAVFVIFICSVWPMLLNTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270



 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 91/205 (44%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R++   ++++        L   S  +   L P + +++ I  L ++
Sbjct: 80  NDKGLGIQLGYSIARVMIGYLLAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + L+A+F IF   VW M  +    + ++ ++   V+R+  +  
Sbjct: 140 PLALY--------TIKDSSLSAVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            ++ ++ A+L +  V  L DQ+L R
Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270


>gi|319782349|ref|YP_004141825.1| nitrate ABC transporter inner membrane subunit [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317168237|gb|ADV11775.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 296

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 23/277 (8%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---------- 359
           +   + +  T    R   P       ++  V  ++ I    VV  +A             
Sbjct: 16  AKPAEVIAFTAKARRRFEPLAIAGKLASALVPPIIVIALMLVVWQIACSSPTSSLPPPTQ 75

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W     ++ H  +      + + W   I++ RV V   +A+++ + +G  +G       
Sbjct: 76  VWNEAYDLIAHPFFDNGPQDIGLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMR 135

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P  Q+L   P   + PL ++       + +     ++   + W I+ N   G    P
Sbjct: 136 GLDPVFQILRTVPPLAWLPLSLAAFR----DSSPSAIFVIFITSIWPIIINTAVGVRNIP 191

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++ V+    +  + ++  I++P   PY  TG     G +W A + +E+ + G      
Sbjct: 192 EDYRNVSRILRLNQFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G +I ++      P++++ +  +      L+R +
Sbjct: 246 VGIGFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 282



 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +       L  +S      L P+  I++++P L +L  +
Sbjct: 97  GLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP D   VSR  RL+ ++ 
Sbjct: 157 LAAFRDSSP--------SAIFVIFITSIWPIIINTAVGVRNIPEDYRNVSRILRLNQFEF 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + VP + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 209 FVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 262

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +    F  D+L+
Sbjct: 263 DIIVALAYIGVTGFCLDRLV 282


>gi|254454126|ref|ZP_05067563.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198268532|gb|EDY92802.1| nitrate ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 259

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 11/215 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  AWQ +          D    I +G  +++RV+    +A+ I IP+G  IG      
Sbjct: 42  VLVKAWQELSNPFYDAGPNDKGIGIQIGY-SIYRVLTGYFLAAFIAIPLGFLIGMSSVAH 100

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     +       ++   + W +L N   G +  
Sbjct: 101 KALNPFIQVLRPISPLAWMPLALFIIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 156

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             D+  VA +  +   +    +ILP   P  VTG   + G AW   + +E+   G     
Sbjct: 157 REDWVNVARTHELGALKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 211

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TG+G Y+           V+  +L++    + L+
Sbjct: 212 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 245



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 14/191 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L+   ++         L   S      L P + +++ I  L ++   +    +
Sbjct: 69  GYSIYRVLTGYFLAAFIAIPLGFLIGMSSVAHKALNPFIQVLRPISPLAWMPLALFIIQD 128

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  +  D   V+R+  L   +  + + +
Sbjct: 129 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVIL 180

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 181 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 234

Query: 246 LTMLGVIFLYD 256
           L +  V  L D
Sbjct: 235 LMIGVVGMLLD 245


>gi|86608094|ref|YP_476856.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556636|gb|ABD01593.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 275

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV +    A+++ I +GI +G    I+  + P  Q L       + P+ +
Sbjct: 80  LLRQTLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +             ++   + W IL N   G    P D+  V+    ++   ++  ++
Sbjct: 140 AALQR----NEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A I +E+   G       G+G +I ++ ++    E+++ 
Sbjct: 196 LPSALPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 251 VIYIGAVGLLLDRLM 265



 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 106/255 (41%), Gaps = 22/255 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILL---------HGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +I P +  ++ F+L+  I+               + E +    +  +   +     L + 
Sbjct: 24  QILPPVVGIVGFLLIWQILASANLIRLPGPWDVWMDERSRYLILHPLYRNSDLDQGLLRQ 83

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+      + L       L   S  +   L PI   ++ +  L ++  ++    
Sbjct: 84  TLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISLAALQ 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+F IF + +W +  +    +  IP D   VS+  +LS    F+ + 
Sbjct: 144 RNEP--------AALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + + +   W  ++A+E+++ G     +PGIG +I  A ++  +  I+ A
Sbjct: 196 LPSALPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  V  L D+L+
Sbjct: 251 VIYIGAVGLLLDRLM 265


>gi|229587775|ref|YP_002869894.1| putative ABC sulfur transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359641|emb|CAY46484.1| putative ABC sulfur transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 530

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 76/562 (13%), Positives = 176/562 (31%), Gaps = 68/562 (12%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P    R+ P +  +  F L   + +      ++   P  +V    + L    L  + + +
Sbjct: 21  PLRCERLLPWLLPVTLFAL-WWLASRNHWMSEQILPPPSLVWSSAVELAGGELWSHLAIS 79

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+   ++  +    +   +   S R   ++ P    +  +P L ++   +V+F     
Sbjct: 80  LQRLSWGLLAGIGAGALLGAVLGFSARAERLVFPTFSALSQVPTLAWIPLFMVFFGIG-- 137

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E   +  +  + V  +T      + +    L E +R  RL        L +P +
Sbjct: 138 ------ETLKLVVLVKAIVVPVTLHTLVGVRDAQPQLREAARVLRLPTHLLIRRLILPAA 191

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P  +  + ++++ GW  ++A E++   +      GIG  +  A +   L  +   ++ +
Sbjct: 192 LPAFMAGVRLALAAGWTSLLAVELLASSE------GIGYLMVWARQLFMLDIVFVCIVVI 245

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
                + D                                      + ++     ++  P
Sbjct: 246 GVFGVVMD------------------------------------RGIGWLDRKWVHWPHP 269

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
            +  +++  R  G  R       L L +  +V+      W      V+  +   +    V
Sbjct: 270 ATAQIRRGPRYQGWQRLQPWVLPLLLLALWQVATQQG--WVDPNILVSPWVVLHTTVAGV 327

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                   L       +    +   +  A       G+W+G        + P    L   
Sbjct: 328 VDGNLSGALGTSLGRSLGGLLLGGGVGFAM------GLWLGLSRRSERVLGPTLSALRQI 381

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + PL+ +      L   +     +     + +                E A    +
Sbjct: 382 AIFAWVPLLTAWFGLGELAKWV----FIALAAFFPLFIATQRSVLNLSPQLNEAAQVLRL 437

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             ++  R ++LPG       G   +   AW  +I +E            G+G+ +  + +
Sbjct: 438 NLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEYFM-----PSNGGIGSLMIGAQQ 492

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                 ++ G+L++     ALN
Sbjct: 493 LLRMDLIMSGMLLVGLTGAALN 514



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +   +L      +  R L  +++     F        SRR   VL 
Sbjct: 313 LVSPWVVLHTTVAGVVDGNLSGALGTSLGRSLGGLLLGGGVGFAMGLWLGLSRRSERVLG 372

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ I I  ++     +F      K +   LAA F +F         +  +S+ N+
Sbjct: 373 PTLSALRQIAIFAWVPLLTAWFGLGELAKWVFIALAAFFPLF--------IATQRSVLNL 424

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E ++  RL+ +Q+   L +P +  G+   + +S+   W   + +E  +  +    
Sbjct: 425 SPQLNEAAQVLRLNLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEYFMPSN---- 480

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIGS +  A +   +  I+  ML +       + L+ + +   + ++R
Sbjct: 481 -GGIGSLMIGAQQLLRMDLIMSGMLLVGLTGAALN-LIGQRIETRATRWR 528


>gi|87311267|ref|ZP_01093389.1| nitrate transport permease protein [Blastopirellula marina DSM
           3645]
 gi|87286007|gb|EAQ77919.1| nitrate transport permease protein [Blastopirellula marina DSM
           3645]
          Length = 519

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 70/189 (37%), Gaps = 14/189 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y            ++  V V  + A+ I IP+G+  G    I + + P   L       V
Sbjct: 298 YAKPPTFFDQVFTSIECVFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIV 357

Query: 433 FFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           + P+V   V  +   P+        L  ++ +   + W  L N   G ++   D   VA 
Sbjct: 358 WLPIVFIVVGGFIERPDEAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVAR 417

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              ++ W     I++P   P   TG   + G  W   I +E+ S       + GLG ++ 
Sbjct: 418 VLRLSMWDRLTKIVIPSALPLIFTGLRISLGVGWMVLIAAELLS------SSPGLGKFVW 471

Query: 545 ESTEKGSFP 553
           +    GS  
Sbjct: 472 DMFNNGSSD 480



 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130
           +    + +         L   ++ +   L P++ + + +  + +L    +          
Sbjct: 315 VFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIVWLPIVFIVVGGFIERPD 374

Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V  A L++   +    +W    +    + +I +D   V+R  RLS W +   + +P 
Sbjct: 375 EAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPS 434

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++P +   + +S+  GW  ++A+E++         PG+G ++        
Sbjct: 435 ALPLIFTGLRISLGVGWMVLIAAELLSSS------PGLGKFVWDMFNNGS 478


>gi|295689454|ref|YP_003593147.1| nitrate ABC transporter inner membrane subunit [Caulobacter segnis
           ATCC 21756]
 gi|295431357|gb|ADG10529.1| nitrate ABC transporter, inner membrane subunit [Caulobacter segnis
           ATCC 21756]
          Length = 292

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   I+++  I +G+++G        + P  Q+L   P   + P+ +
Sbjct: 94  LFWHVFTSLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLPISL 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +               ++     W I+ N   G    P+D+  VA    ++   ++  I+
Sbjct: 154 AAF----HQAQPSALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVEYFFKIL 209

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + SE+   G       G+G +I +        ++++ 
Sbjct: 210 LPATTPYIFTGLRIGIGMSWLAIVASEMLLGG------VGIGFFIWDQYNASRIADIIVA 263

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 264 LAWVGMTGFFLDRLV 278



 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     IS +   +       +R     L PI  +++++P L +L  
Sbjct: 92  KGLFWHVFTSLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLPI 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F    P        +A+F IF + +W +  +    + NIP D   V+R  RLS  +
Sbjct: 152 SLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVE 203

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P + P +   + + +   W  +VASEM++ G       GIG +I        +
Sbjct: 204 YFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGGV------GIGFFIWDQYNASRI 257

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A+  +    F  D+L+
Sbjct: 258 ADIIVALAWVGMTGFFLDRLV 278


>gi|222106861|ref|YP_002547652.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4]
 gi|221738040|gb|ACM38936.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4]
          Length = 297

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W+    ++    + +    I LG    +++ RV +   +A+I+ + +G  +G       
Sbjct: 77  VWEEAHDLITAPFFNNGPQDIGLGLRVLVSLERVAIGFGLAAIVGVFLGAVVGQSIWAMR 136

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P  Q+L   P   + PL ++       N N     ++   + W ++ N   G    P
Sbjct: 137 GLDPIFQILRTVPPLAWLPLSLAAFQ----NSNPSAIFVIFITSIWPVIINTAVGVRNIP 192

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +D++ VA    +    ++  I++P   PY  TG     G +W A + +E+ + G      
Sbjct: 193 DDYRNVARVLRLNPLEFFIRIMVPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------ 246

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G +I ++       ++++ +  +      L++ +
Sbjct: 247 VGIGFFIWDAWNSSRLSDIIVALAYIGVTGFVLDKLV 283



 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 21/254 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGII-----NILLHGIQETTVPRDIVDIVPITLDVH--SLPQYA 65
           R + P    L   + +  I        L    Q      D++             L    
Sbjct: 44  RNVVPPFVVLAILLGIWQIACSHAGATLPPPSQVWEEAHDLITAPFFNNGPQDIGLGLRV 103

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++ +       +  +S      L PI  I++++P L +L  ++  F N
Sbjct: 104 LVSLERVAIGFGLAAIVGVFLGAVVGQSIWAMRGLDPIFQILRTVPPLAWLPLSLAAFQN 163

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP D   V+R  RL+  + F  + V
Sbjct: 164 SNP--------SAIFVIFITSIWPVIINTAVGVRNIPDDYRNVARVLRLNPLEFFIRIMV 215

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L  I+ A+
Sbjct: 216 PAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLSDIIVAL 269

Query: 246 LTMLGVIFLYDQLL 259
             +    F+ D+L+
Sbjct: 270 AYIGVTGFVLDKLV 283


>gi|254422823|ref|ZP_05036541.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC
           7335]
 gi|196190312|gb|EDX85276.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC
           7335]
          Length = 279

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + L + W   I++ RV +   +AS+I +P+GI IG  P       P+ QLL       +
Sbjct: 78  PNDLGIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAW 137

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +  +    +++  + W  L N   G +    ++ +V+ +   +  R 
Sbjct: 138 LPLGLYIFR----DSEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRT 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              II+P   P  V+G   + G +W   + +E+          TGLG +I         P
Sbjct: 194 IFKIIIPAALPNIVSGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIP 246

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ + I+    L L+
Sbjct: 247 NILVAIFIIGLVGLILD 263



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L   S        P + +++ +  L +L   
Sbjct: 82  GIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAWLPLG 141

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +        +E+  IF I  S +W    +    + N+  +  +VS++   S  + 
Sbjct: 142 LYIFRD--------SEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRT 193

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P +V  + +SM   W  +VA+EM++         G+G +I        + 
Sbjct: 194 IFKIIIPAALPNIVSGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIP 246

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL A+  +  V  + D + 
Sbjct: 247 NILVAIFIIGLVGLILDSVF 266


>gi|87300722|ref|ZP_01083564.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus sp. WH 5701]
 gi|87284593|gb|EAQ76545.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus sp. WH 5701]
          Length = 276

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 13/198 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W   I++ RV +   ++ ++ I +G  +G    I     P  Q+L   P   +FP+ +
Sbjct: 78  LGWQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFPIAL 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   + N     ++   + W ++ N   G    P D+  VA    +    + R I+
Sbjct: 138 MVFQ----DANTSAVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKRSYIREIV 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           +P   PY  TG   A G AW A + +E+           G+G +I ++   G   S  ++
Sbjct: 194 IPATVPYVFTGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDTSASQI 247

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L ++ +    LAL+R +
Sbjct: 248 ILAIVYVGIVGLALDRLV 265



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 105/265 (39%), Gaps = 26/265 (9%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ---------ETTVPRDIVDIVPITLD 57
               I + + P +  + AF++   +++ +L   +         +T  P            
Sbjct: 15  FSSAILKGMVPYVICIGAFLISWQLLSAILGAARLPGPIQVVVDTWDPYISDPFYDNGGT 74

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L      +  R+     +S +       L   +R +G    P++ +++++P L +  
Sbjct: 75  SKGLGWQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFP 134

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++ F +        A  +A+F IF + +W +  +    +  IP+D   V+R  RL   
Sbjct: 135 IALMVFQD--------ANTSAVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKR 186

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P ++P +   + +++   W  +VA+EM+          GIG +I  A     
Sbjct: 187 SYIREIVIPATVPYVFTGLRIAVGLAWLAIVAAEML------KADGGIGYFIWDAYNAGG 240

Query: 238 LLA---ILYAMLTMLGVIFLYDQLL 259
             +   I+ A++ +  V    D+L+
Sbjct: 241 DTSASQIILAIVYVGIVGLALDRLV 265


>gi|240137626|ref|YP_002962097.1| nitrate transport system permease protein [Methylobacterium
           extorquens AM1]
 gi|240007594|gb|ACS38820.1| nitrate transport system permease protein [Methylobacterium
           extorquens AM1]
          Length = 284

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV +   +A ++ IPVG  IG  P +S
Sbjct: 67  VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 125

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+ Q+L       + PL +  +     + +L    ++   + W +L N + G +  
Sbjct: 126 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 181

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 182 RKEWHNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 236

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V+  +L++    + L++ L  
Sbjct: 237 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 275



 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     +++L       L   S  +   L P + I++ +  L ++   +    
Sbjct: 93  LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 149

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + 
Sbjct: 150 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVI 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  ++ +
Sbjct: 205 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 258

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  + DQLL R
Sbjct: 259 ILVIGLVGMVLDQLLAR 275


>gi|315498257|ref|YP_004087061.1| nitrate abc transporter, inner membrane subunit [Asticcacaulis
           excentricus CB 48]
 gi|315416269|gb|ADU12910.1| nitrate ABC transporter, inner membrane subunit [Asticcacaulis
           excentricus CB 48]
          Length = 302

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A++  + +G ++G          P  Q+L   P   + P+ +
Sbjct: 104 LFWHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAWLPISL 163

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       ++   + W I+ N + G    P D+  VA    +T   ++  I+
Sbjct: 164 AALREAQPS----ALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLTPGEYFFKIM 219

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  TG     G +W A + SE+   G       G+G +I +        ++++ 
Sbjct: 220 LPAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGIGFFIWDQYNSSRMSDIIVA 273

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 274 LVWVGLVGFVLDRLV 288



 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 102/264 (38%), Gaps = 29/264 (10%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------- 62
             RR   +        L+     +L+     T  P  +     + ++   L         
Sbjct: 39  SKRRKLADKAGNYLMPLLTVSALLLMWEALGTAFPGGLPSPSMVLMEAQELIFDPFYDRG 98

Query: 63  -------QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                   +   +  R+     ++ +   +                PI+ +++++P L +
Sbjct: 99  GVDKGLFWHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAW 158

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L  ++       P        +A+F IF + +W +  +    + NIP+D   V+R  RL+
Sbjct: 159 LPISLAALREAQP--------SALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLT 210

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F+ + +P + P +   + + +   W  +VASEM++ G       GIG +I      
Sbjct: 211 PGEYFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV------GIGFFIWDQYNS 264

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  I+ A++ +  V F+ D+L+
Sbjct: 265 SRMSDIIVALVWVGLVGFVLDRLV 288


>gi|163853891|ref|YP_001641934.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
 gi|163665496|gb|ABY32863.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
          Length = 285

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           ++ R+ P +  L  F+L+  ++             R + +   I +D           L 
Sbjct: 30  VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIIDPFYDNGGTDKGLF 88

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            + + +  R+     ++++   +  TL  +S      L PI  I+++IP L +L  ++  
Sbjct: 89  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 148

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + F  
Sbjct: 149 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+
Sbjct: 201 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 254

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  + F+ D+++
Sbjct: 255 VALVYVGLIGFVLDRMV 271



 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL +
Sbjct: 87  LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 146

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 147 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 202

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 203 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 256

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 257 LVYVGLIGFVLDRMV 271


>gi|254560198|ref|YP_003067293.1| nitrate transport system permease [Methylobacterium extorquens DM4]
 gi|254267476|emb|CAX23317.1| nitrate transport system permease protein [Methylobacterium
           extorquens DM4]
          Length = 284

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV +   +A ++ IPVG  IG  P +S
Sbjct: 67  VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 125

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+ Q+L       + PL +  +     + +L    ++   + W +L N + G +  
Sbjct: 126 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 181

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 182 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 236

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V+  +L++    + L++ L  
Sbjct: 237 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 275



 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     +++L       L   S  +   L P + I++ +  L ++   +    
Sbjct: 93  LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 149

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + 
Sbjct: 150 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  ++ +
Sbjct: 205 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 258

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  + DQLL R
Sbjct: 259 ILVIGLVGMVLDQLLAR 275


>gi|240141347|ref|YP_002965827.1| Nitrate transport permease protein [Methylobacterium extorquens
           AM1]
 gi|254563853|ref|YP_003070948.1| ni=trate transport permease [Methylobacterium extorquens DM4]
 gi|240011324|gb|ACS42550.1| Nitrate transport permease protein [Methylobacterium extorquens
           AM1]
 gi|254271131|emb|CAX27138.1| Nitrate transport permease protein [Methylobacterium extorquens
           DM4]
          Length = 286

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           ++ R+ P +  L  F+L+  ++             R + +   I +D           L 
Sbjct: 31  VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIIDPFYDNGGTDKGLF 89

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            + + +  R+     ++++   +  TL  +S      L PI  I+++IP L +L  ++  
Sbjct: 90  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + F  
Sbjct: 150 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+
Sbjct: 202 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 255

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  + F+ D+++
Sbjct: 256 VALVYVGLIGFVLDRMV 272



 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL +
Sbjct: 88  LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 147

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 148 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 203

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 204 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 257

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 258 LVYVGLIGFVLDRMV 272


>gi|166364220|ref|YP_001656493.1| nitrate/nitrite transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166086593|dbj|BAG01301.1| nitrate/nitrite transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 275

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V   +A+I+ I VGI IG    I   I P  Q+L   P   + P+ +
Sbjct: 78  LFWQIFASLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLPISL 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       N       ++     W I+ N   G    P D+K V+    ++   ++  I+
Sbjct: 138 AAFR----NNEPSAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNIL 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 194 FPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILA 247

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 248 LIYVGIVGFLLDRLM 262



 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +       L   +  +   + PI  I++++P L +L  +
Sbjct: 77  GLFWQIFASLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLPIS 136

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F N  P        +AIF IF + +W +  +    +  +P+D + VSR  +LS  + 
Sbjct: 137 LAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEY 188

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ +  P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     + 
Sbjct: 189 FFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSMIS 242

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V FL D+L+
Sbjct: 243 EIILALIYVGIVGFLLDRLM 262


>gi|218532835|ref|YP_002423651.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218525138|gb|ACK85723.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
          Length = 285

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           ++ R+ P +  L  F+L+  ++             R + +   I +D           L 
Sbjct: 30  VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVMTEAWDIIIDPFYDNGGTDKGLF 88

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            + + +  R+     ++++   +  TL  +S      L PI  I+++IP L +L  ++  
Sbjct: 89  WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 148

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+  + F  
Sbjct: 149 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+
Sbjct: 201 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 254

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +  + F+ D+++
Sbjct: 255 VALVYVGLIGFVLDRMV 271



 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A +  + +G  +G        + P  Q+L   P   + PL +
Sbjct: 87  LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 146

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 147 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 202

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 203 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 256

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 257 LVYVGLIGFVLDRMV 271


>gi|163850577|ref|YP_001638620.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
 gi|163662182|gb|ABY29549.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           extorquens PA1]
          Length = 279

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV +   +A ++ IPVG  IG  P +S
Sbjct: 62  VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+ Q+L       + PL +  +     + +L    ++   + W +L N + G +  
Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V+  +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     +++L       L   S  +   L P + I++ +  L ++   +    
Sbjct: 88  LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + 
Sbjct: 145 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  ++ +
Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 253

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  + DQLL R
Sbjct: 254 ILVIGLVGMVLDQLLAR 270


>gi|163761182|ref|ZP_02168258.1| nitrate ABC transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
 gi|162281521|gb|EDQ31816.1| nitrate ABC transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
          Length = 277

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 13/225 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW  +          D    I +G  +++RV+    +A+++ IP+G  IG        + 
Sbjct: 64  AWNELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYALAALVAIPLGFLIGMSTVAYKALN 122

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     +       ++   + W +L N   G +    D+
Sbjct: 123 PFIQVLRPISPLAWMPLALFIIQDSERS----AIFVIFICSIWPMLINTAFGVAGVRKDW 178

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  +   R    +ILP   P  VTG   + G AW   + +E+   G      TG+
Sbjct: 179 VNVAKTHELGALRTAFMVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG------TGI 232

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582
           G Y+           V+  +L++    +AL+        L  Y  
Sbjct: 233 GYYVWNEWNNLDLTSVIFSILMIGVVGMALDAMFGILQRLVAYSE 277



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 16/205 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+LS   ++ L       L   S      L P + +++ I  L ++   +    +
Sbjct: 87  GYSIYRVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQD 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E +AIF IF   +W M  +    +  + +D   V+++  L   +  + + +
Sbjct: 147 --------SERSAIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +S+   W  +VA+EM+V G       GIG Y+       DL ++++++
Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252

Query: 246 LTMLGVIFLYDQL--LFRPMIVWSN 268
           L +  V    D +  + + ++ +S 
Sbjct: 253 LMIGVVGMALDAMFGILQRLVAYSE 277


>gi|251789059|ref|YP_003003780.1| nitrate ABC transporter inner membrane subunit [Dickeya zeae
           Ech1591]
 gi|247537680|gb|ACT06301.1| nitrate ABC transporter, inner membrane subunit [Dickeya zeae
           Ech1591]
          Length = 310

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 19/276 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-- 355
           +         P         R +   R    +   +L        +L   W         
Sbjct: 28  VTLPEAATIPPADEPAATAPRPI--WRQRLSQGVSRLLPGGIGMLLLLAVWQIAALSSKG 85

Query: 356 --AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                  W +   I     Y    +   + W    ++ RV +   +A+++ IP G  IG 
Sbjct: 86  FPTPWQTWLAAQSIFAEPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGR 145

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +++   P   LL       + P+ +          +      +   + W ++ N   
Sbjct: 146 FRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAE 201

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G    P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G
Sbjct: 202 GVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG 261

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                  G+G +I       + P +++ +L++    
Sbjct: 262 ------IGIGFWIWNEWNNLNVPNIIIAILVIGVVG 291



 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 99/245 (40%), Gaps = 20/245 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITL---DVHSLPQYASR 67
           R+ P    +L  + V  I  +   G     +T +    +   P  +   +   +      
Sbjct: 61  RLLPGGIGMLLLLAVWQIAALSSKGFPTPWQTWLAAQSIFAEPFYVAGPNDQGIGWNVLA 120

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     ++ L       L  + R +  +  PI+ +++ +  L +L   ++ F    
Sbjct: 121 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAE 180

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS +     + +P 
Sbjct: 181 P--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPA 232

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  I+ A+L 
Sbjct: 233 VLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNLNVPNIIIAILV 286

Query: 248 MLGVI 252
           +  V 
Sbjct: 287 IGVVG 291


>gi|311693904|gb|ADP96777.1| nitrate transport system permease protein [marine bacterium HP15]
          Length = 275

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 11/216 (5%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
             I +AW  +          D    I L   +++RV+   + A  I +PVG  IG  P +
Sbjct: 57  AVIKLAWAELSDPFYDAGANDKGIGIQL-AYSVYRVLTGYLAAMAIALPVGFLIGMSPLM 115

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P+ Q+L       + PL +  +     +       ++   + W +L N   G + 
Sbjct: 116 YKALNPYIQVLRPISPLAWMPLALFIIQDSDAS----AIFVIFICSIWPMLLNTAFGVAN 171

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D+  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G    
Sbjct: 172 VRQDWVNVARTHELGPLRTAITVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG---- 227

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             TG+G Y+           V+  +L++    + L+
Sbjct: 228 --TGIGYYVWNEWNNLDLASVIFSILMIGVVGMLLD 261



 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+  + ++        L   S  +   L P + +++ I  L ++   +    
Sbjct: 84  LAYSVYRVLTGYLAAMAIALPVGFLIGMSPLMYKALNPYIQVLRPISPLAWMPLALFIIQ 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        ++ +AIF IF   +W M  +    + N+ +D   V+R+  L   +    + 
Sbjct: 144 D--------SDASAIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVI 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG Y+       DL +++++
Sbjct: 196 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLASVIFS 249

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  L D  L +
Sbjct: 250 ILMIGVVGMLLDLALGK 266


>gi|330990546|ref|ZP_08314504.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp.
           SXCC-1]
 gi|329762449|gb|EGG78935.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp.
           SXCC-1]
          Length = 286

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 11/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +  A Q++    ++    D   + W    ++ RV +   +A ++ +P+G  IG RP I  
Sbjct: 70  VASALQALHAPFHNNGPSD-RGIGWQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRR 128

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + PF Q+L       + PL +  +     N       ++   + W I+ N   G  +  
Sbjct: 129 AVDPFIQILRPISPLAWMPLALYTIR----NAEGCGIFVIFICSLWPIVLNTAFGVGSVR 184

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            ++  VA +  +   R   +++LP   P  +TG     G AW A + +E+       + +
Sbjct: 185 REWLNVARTLEVGWARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEML------VGS 238

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G+G ++       S   V+L VL++    + L+  L
Sbjct: 239 SGIGYFVWNQWNNLSLSNVLLAVLLIGFTGMVLDGAL 275



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               +      + LR+     ++++       L      +   + P + I++ I  L ++
Sbjct: 87  SDRGIGWQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRRAVDPFIQILRPISPLAWM 146

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +    N        AE   IF IF   +W +  +    + ++ R+   V+R+  +  
Sbjct: 147 PLALYTIRN--------AEGCGIFVIFICSLWPIVLNTAFGVGSVRREWLNVARTLEVGW 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++  ++ +P + P ++  M + +   W  +VA+EM+V         GIG ++       
Sbjct: 199 ARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEMLVGSS------GIGYFVWNQWNNL 252

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L A+L +     + D  L
Sbjct: 253 SLSNVLLAVLLIGFTGMVLDGAL 275


>gi|86605329|ref|YP_474092.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-3-3Ab]
 gi|86553871|gb|ABC98829.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-3-3Ab]
          Length = 319

 Score =  156 bits (395), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 10/194 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A ++ +  G+ IG    +   + P  Q+L   P   + P+ +
Sbjct: 123 LFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISL 182

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       + N     ++     W IL N + G    P D++ VA    ++GW+++  I+
Sbjct: 183 AAFR----DANPSAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILA 292

Query: 559 VLIMCCFVLALNRF 572
           ++ +    L L+R 
Sbjct: 293 LIYVGMVGLLLDRI 306



 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L   Q+T  P           +   L      +  R+     ++ L   V   +   +R 
Sbjct: 98  LQVWQDTWDPLIKDPFFDYGGNAKGLFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRW 157

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L   L PI  +++++P L +L  ++  F +  P        +AIF IF + +W +  +  
Sbjct: 158 LYEALDPIFQVLRTVPPLAWLPISLAAFRDANP--------SAIFVIFITALWPILINTV 209

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  IP+D   V+R  R+SGW+ F+ +  P ++P +   + + +   W  +VA+EM++ 
Sbjct: 210 VGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVPYIFTGLRIGVGLSWLAIVAAEMLIG 269

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G       GIG +I  A     +  I+ A++ +  V  L D++
Sbjct: 270 GV------GIGFFIWDAWNSSRISEIILALIYVGMVGLLLDRI 306


>gi|146339772|ref|YP_001204820.1| putative nitrate ABC transporter permease (ntrB-like protein)
           [Bradyrhizobium sp. ORS278]
 gi|146192578|emb|CAL76583.1| putative nitrate ABC transporter (permease protein) (ntrB-like
           protein) [Bradyrhizobium sp. ORS278]
          Length = 279

 Score =  156 bits (395), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV++  +IA  I IP+G  IG  P +S
Sbjct: 62  VGAKLWEHLKRPFYDNGPNDKGLGIQL-AFSIGRVMLGYLIAVAIAIPLGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQILKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +  +R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGNFRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQLLAR 270



 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 23/236 (9%)

Query: 35  LLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFV 85
              G      P D+   +   L         +   L    + +  R++   +I++     
Sbjct: 49  ATQGKSAMPGPLDVGAKLWEHLKRPFYDNGPNDKGLGIQLAFSIGRVMLGYLIAVAIAIP 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L   S  +   L P + I++ I  L ++   +          +  + L+AIF IF  
Sbjct: 109 LGFLIGMSPLMSKALDPFIQILKPISPLAWMPLALY--------TIKDSSLSAIFVIFIC 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            VW M  +    + ++ ++   V+R+  +  +++ + + +P + P ++  M +S+   W 
Sbjct: 161 SVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTILTGMRISIGIAWL 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +VA+EM+V G       GIG ++        +  ++ A+L +  V  + DQLL R
Sbjct: 221 VIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQLLAR 270


>gi|299530863|ref|ZP_07044277.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
 gi|298721084|gb|EFI62027.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
          Length = 290

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V      ++ RV +    A    IP+G  IG  P     + PF Q+L       + P+ +
Sbjct: 95  VGIQVAYSLGRVALGFGFAVAFAIPLGFLIGMSPLAYRALDPFIQVLKPISPLAWMPIAL 154

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     + ++    ++   + W +L N   G +    ++  VA++  +   R    +I
Sbjct: 155 YTIK----DSSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVI 210

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   + G AW   + +E+   G      TG+G ++       S   V+  
Sbjct: 211 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLANVIFA 264

Query: 559 VLIMCCFVLALNRFL 573
           +L++    +AL+   
Sbjct: 265 ILVIGLVGMALDMLF 279



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R+      ++ F      L   S      L P + +++ I  L ++   +     
Sbjct: 100 AYSLGRVALGFGFAVAFAIPLGFLIGMSPLAYRALDPFIQVLKPISPLAWMPIALY---- 155

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                +  + ++ IF IF   +W M  +    +  + R+   V+ + ++   +K   + +
Sbjct: 156 ----TIKDSSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVIL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  M +SM   W  +VA+EM+V G       GIG ++        L  +++A+
Sbjct: 212 PAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLANVIFAI 265

Query: 246 LTMLGVIFLYDQLLFR 261
           L +  V    D L  +
Sbjct: 266 LVIGLVGMALDMLFAK 281


>gi|86605595|ref|YP_474358.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86554137|gb|ABC99095.1| nitrate ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 275

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV +    A+++ I +GI +G    I+  + P  Q L       + P+ +
Sbjct: 80  LLRQTLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +               ++   + W IL N   G    P D+  V+    ++   ++  ++
Sbjct: 140 AA----SQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + PY  TG     G +W A I +E+   G       G+G +I ++ ++    E+++ 
Sbjct: 196 LPSVLPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L+R +
Sbjct: 251 VIYIGAVGLLLDRLV 265



 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 105/255 (41%), Gaps = 22/255 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILL---------HGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +I P +  ++ F+L+  I+               + E +    +  +   +     L + 
Sbjct: 24  QILPPVVGIVGFLLIWQILASANLIRLPGPWDVWMDERSRYLILHPLYRNSDLDQGLLRQ 83

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+      + L       L   S  +   L PI   ++ +  L ++  ++    
Sbjct: 84  TLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISLAASQ 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+F IF + +W +  +    +  IP D   VS+  +LS    F+ + 
Sbjct: 144 RNEP--------AALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +P +   + + +   W  ++A+E+++ G     +PGIG +I  A ++  +  I+ A
Sbjct: 196 LPSVLPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  V  L D+L+
Sbjct: 251 VIYIGAVGLLLDRLV 265


>gi|154246559|ref|YP_001417517.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160644|gb|ABS67860.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter
           autotrophicus Py2]
          Length = 279

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W ++          D   +      ++ RV +  ++A ++ +P+G  IG  P   
Sbjct: 62  VAAKLWDNLKRPFYDNGPNDKG-LGLQLLYSIGRVALGYVLAVLVAVPIGFLIGMSPLAY 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +    L+       ++   + W +L N   G  A 
Sbjct: 121 RALDPFIQVLKPISPLAWMPLALYTIKDSALS----AIFVIFICSVWPMLLNTAFGVGAV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +  WR    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWLNVARTLEVGPWRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++G+L +    + L+  L  
Sbjct: 232 -TGIGYFVWNEWNNLSIANVIVGILFIGVVGMVLDLILAR 270



 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R+    V+++L       L   S      L P + +++ I  L ++
Sbjct: 80  NDKGLGLQLLYSIGRVALGYVLAVLVAVPIGFLIGMSPLAYRALDPFIQVLKPISPLAWM 139

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + L+AIF IF   VW M  +    +  + ++   V+R+  +  
Sbjct: 140 PLALY--------TIKDSALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGP 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 192 WRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            +  ++  +L +  V  + D +L R
Sbjct: 246 SIANVIVGILFIGVVGMVLDLILAR 270


>gi|239993923|ref|ZP_04714447.1| putative nitrate ABC transporter, permease protein [Alteromonas
           macleodii ATCC 27126]
          Length = 219

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 16/198 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ V+V  +IAS++ +PVGI  G      + I P  QL        + PLV   VS  +
Sbjct: 12  SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71

Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           ++ +       +  +  +     W  L N   G S    D   V+    +T +     I+
Sbjct: 72  VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ VL +      L+R +
Sbjct: 186 MVAVLTIGAIGFVLDRLM 203



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   ++   +I+ +       L   S+     + P++ + + +  L +L    +    LY
Sbjct: 12  SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71

Query: 128 PGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + + + F +    +W    +    + NI +DL  VS+  RL+ +     + 
Sbjct: 72  VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A+LT+  + F+ D+L+   +  + W
Sbjct: 186 MVAVLTIGAIGFVLDRLMLSIQRAVSW 212


>gi|114766329|ref|ZP_01445315.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Pelagibaca
           bermudensis HTCC2601]
 gi|114541446|gb|EAU44492.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Roseovarius sp. HTCC2601]
          Length = 360

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V    +I S + IP+GI  G  P+ +S I P  Q+   
Sbjct: 138 VKDIAYTGAPSYYEQIWTSIKTVFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKP 197

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   +S      +       L  ++ +   + W  L N   G ++   D  
Sbjct: 198 VSPLAWLPIVTMIISAAVATNDGLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLV 257

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  W     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S  ++++ V  +      L+R ++    L+ +    
Sbjct: 312 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMFALQSLFTFSNNR 360



 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 12/195 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYP 128
           +    +I          LA  S      + P++ I + +  L +L    +     +    
Sbjct: 160 VFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATND 219

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VS+  +++ W K   L +P +
Sbjct: 220 GLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 279

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +      L  I+ A+
Sbjct: 280 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKIMVAV 333

Query: 246 LTMLGVIFLYDQLLF 260
            T+  + FL D+++F
Sbjct: 334 FTIGIIGFLLDRVMF 348


>gi|297539843|ref|YP_003675612.1| nitrate ABC transporter inner membrane subunit [Methylotenera sp.
           301]
 gi|297259190|gb|ADI31035.1| nitrate ABC transporter, inner membrane subunit [Methylotenera sp.
           301]
          Length = 325

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 131 VGWNILASLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLPIGL 190

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N     ++     W ++ N   G S  P D+  VA   +++ W+    I+
Sbjct: 191 LVFKAA----NPAAIWVIFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKIL 246

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   + G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 247 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 300

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 301 IFVVGIVGLLLE 312



 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 105/267 (39%), Gaps = 28/267 (10%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYAS 66
           + P +F +L  + V  +I+     +      +     + +  D           +     
Sbjct: 79  VLPPVFGVLLLLAVWTLISHQSPNLPGPL--KTWYSAIELFSDPFYVNGPNDQGVGWNIL 136

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       +  +   +  +  PI+ +++ +  L +L   ++ F   
Sbjct: 137 ASLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLPIGLLVFKAA 196

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AAI+ IF S +W M  +    +  +P+D   V++   LS W+    +  P
Sbjct: 197 NP--------AAIWVIFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKILFP 248

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           F +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+ A+ 
Sbjct: 249 FVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIF 302

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273
            +  V  L +  L +     + KF  E
Sbjct: 303 VVGIVGLLLEFALTQI----AKKFSYE 325


>gi|163734362|ref|ZP_02141802.1| nitrate ABC transporter, permease component [Roseobacter litoralis
           Och 149]
 gi|161392370|gb|EDQ16699.1| nitrate ABC transporter, permease component [Roseobacter litoralis
           Och 149]
          Length = 357

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V +  Y            ++  V    +IASI+ IP+GI  G     ++ + P  Q+   
Sbjct: 135 VRNRIYTGKPTYYDQIWTSIKTVFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194

Query: 428 FPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   + W        ++ +   + W  L N   G S+   D  
Sbjct: 195 VSPLAWLPIVTMIVSAVYTTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 254

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ V  +      L+R ++    ++ +    
Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYALQSMFTFSNNR 357



 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I+ +        A  S      L P++ I + +  L +L    +    +Y    
Sbjct: 157 VFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ + K   L +P +
Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330

Query: 246 LTMLGVIFLYDQLL 259
            T+  + FL D+++
Sbjct: 331 FTIGIIGFLLDRVM 344


>gi|218529302|ref|YP_002420118.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218521605|gb|ACK82190.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           chloromethanicum CM4]
          Length = 279

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV +   +A ++ IPVG  IG  P +S
Sbjct: 62  VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+ Q+L       + PL +  +     + +L    ++   + W +L N + G +  
Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G +        S   V+  +L++    + L++ L  
Sbjct: 232 -TGIGYFAWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     +++L       L   S  +   L P + I++ +  L ++   +    
Sbjct: 88  LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L+AIF IF   +W M  +    +    ++   V+R+  +S  ++ + + 
Sbjct: 145 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG +         +  ++ +
Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFAWNEWNNLSITNVITS 253

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  + DQLL R
Sbjct: 254 ILVIGLVGMVLDQLLAR 270


>gi|86749177|ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
 gi|86572205|gb|ABD06762.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
          Length = 279

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ I          D    I LG  ++ RV +  +IA  + IP+G  IG  P ++
Sbjct: 62  VGAKLWEHIQRPFYDNGPNDKGLGIQLGY-SIARVAIGYLIAVAVAIPLGFLIGMSPLMN 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILLIGVVGMLLDQILAR 270



 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R+    +I++        L   S  +   L P + +++ I  L ++
Sbjct: 80  NDKGLGIQLGYSIARVAIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + L+AIF IF   VW M  +    + ++ ++   V+R+  +  
Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGN 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            ++ ++ A+L +  V  L DQ+L R
Sbjct: 246 SIVNVIIAILLIGVVGMLLDQILAR 270


>gi|83649325|ref|YP_437760.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83637368|gb|ABC33335.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 338

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 16/212 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY      +     +++ V V   +A +I +PVG+  G    + + + P  Q+       
Sbjct: 117 TYNGRPTYLDQIVTSLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPL 176

Query: 432 VFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            + PLV   VS  ++  +          ++ +     W  L N + G S    D   V+ 
Sbjct: 177 AWLPLVTMVVSAVYVTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSL 236

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              ++     R ++LP   P   TG   + G  W   I +E+ +      +  GLG ++ 
Sbjct: 237 VLRLSWTTKVRKVVLPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVW 290

Query: 545 ESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
           +  + G   S   +++ V  +     AL+R +
Sbjct: 291 DEFQNGSSNSLGRIMVAVFTIGFIGFALDRVM 322



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +     +++L       +   S+ +   + P++ I + +  L +L    +    +Y
Sbjct: 131 SLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVY 190

Query: 128 PGKVIGAELAAI---FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  E + +     +    +W    +    +  + +DL  VS   RLS   K   + 
Sbjct: 191 VTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSLVLRLSWTTKVRKVV 250

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +PF++P +   M +S+  GW  ++A+EM+         PG+G ++    +      L  I
Sbjct: 251 LPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 304

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + A+ T+  + F  D+++   +  I W
Sbjct: 305 MVAVFTIGFIGFALDRVMLAIQRRIAW 331


>gi|254438593|ref|ZP_05052087.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254039|gb|EDY78353.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 357

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V    +IASII IP+GI  G     ++ + P  Q+        + P+V   VS  +
Sbjct: 153 SIKTVFFGFLIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVY 212

Query: 446 LNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              + W        ++ +   + W  L N   G S+   D   V+    +  +     ++
Sbjct: 213 TTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLV 272

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555
           LP   P   TG   + G  W   I +E+ +      +  GLG ++ +  + G   S   +
Sbjct: 273 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARI 326

Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
           ++ V  +      L+R ++    ++ +    
Sbjct: 327 MVAVFTIGIIGFLLDRVMYALQSMFTFSNSR 357



 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I+ +        A  S      L P++ I + +  L +L    +    +Y    
Sbjct: 157 VFFGFLIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ + K   L +P +
Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330

Query: 246 LTMLGVIFLYDQLL 259
            T+  + FL D+++
Sbjct: 331 FTIGIIGFLLDRVM 344


>gi|158338271|ref|YP_001519448.1| nitrate ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158308512|gb|ABW30129.1| nitrate ABC transporter, permease protein [Acaryochloris marina
           MBIC11017]
          Length = 276

 Score =  155 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 11/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + L + W    ++ RV +   +ASII +P+GI +G     +    P+ QLL       +
Sbjct: 74  PNDLGIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAW 133

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        N       +++  + W  L N + G +    ++ +V+ +   +  R 
Sbjct: 134 LPLGLYIFR----NSENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRT 189

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +I+P   P  + G   + G AW   + +E+          +GLG ++       S  
Sbjct: 190 VFKVIIPAALPNIIAGLRISMGIAWLVIVAAEMLLG-------SGLGYFVWNEWNNLSIS 242

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++ + I+    + L++  
Sbjct: 243 NILVAIFIIGLVGIVLDQIF 262



 Score =  136 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ +       L   SR       P + +++ +  L +L   
Sbjct: 78  GIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAWLPLG 137

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F N        +E   +F I  S +W    +    + N+  +  +VS++   S  + 
Sbjct: 138 LYIFRN--------SENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRT 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  + +SM   W  +VA+EM++         G+G ++        + 
Sbjct: 190 VFKVIIPAALPNIIAGLRISMGIAWLVIVAAEMLLGS-------GLGYFVWNEWNNLSIS 242

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL A+  +  V  + DQ+ 
Sbjct: 243 NILVAIFIIGLVGIVLDQIF 262


>gi|22298894|ref|NP_682141.1| nitrate/nitrite transport system permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295075|dbj|BAC08903.1| nitrate/nitrite transport system permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 281

 Score =  155 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 10/193 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A++I + +G+ IG    +   + P  Q+L   P   + P+ +
Sbjct: 82  LGWQILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIAL 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       ++     W I+ N I G    P D+K VA    ++   ++  I+
Sbjct: 142 AALR----DNEPAAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNIL 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  TG     G +W A + +E+   G       G+G +I ++       E+++ 
Sbjct: 198 VPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIIVA 251

Query: 559 VLIMCCFVLALNR 571
           V+ +    L L+R
Sbjct: 252 VIYVGIVGLVLDR 264



 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 25/254 (9%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV---------PITLDVHSLPQ 63
           R++      + +F+LV   +++   G+     P  ++              +     L  
Sbjct: 27  RKVILGSLGIFSFLLVWQFLSMA--GVFRLPTPLTVLTETWDLIIAPFYQGSGTDVGLGW 84

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++ +       L   SR L   + PIL +++ +P L +L   +   
Sbjct: 85  QILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIALAAL 144

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +  P        AAIF IF + +W +  +    +  IP+D + V+R  RLS    F  +
Sbjct: 145 RDNEP--------AAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNI 196

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP ++P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ 
Sbjct: 197 LVPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLISEIIV 250

Query: 244 AMLTMLGVIFLYDQ 257
           A++ +  V  + D+
Sbjct: 251 AVIYVGIVGLVLDR 264


>gi|296101975|ref|YP_003612121.1| nitrate ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056434|gb|ADF61172.1| nitrate ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 293

 Score =  155 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A+++ IP+G  IG     S    P   LL       +
Sbjct: 92  PNDMGIGWNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAW 151

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 208 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 261

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ ++I+    L L 
Sbjct: 262 NILIAIVIIGVVGLLLE 278



 Score =  146 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +      +  P++ +++ +  L +L   
Sbjct: 96  GIGWNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAWLPIG 155

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++ 
Sbjct: 208 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 261

Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            IL A++ +  V  L +Q   L+ R    W  K
Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 293


>gi|271501225|ref|YP_003334250.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii
           Ech586]
 gi|270344780|gb|ACZ77545.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii
           Ech586]
          Length = 309

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 13/212 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   I     Y    +   + W    ++ RV +   +A+++ IP G  IG    I
Sbjct: 89  WQTWLAAQSIFADPFYVAGPNDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFRFI 148

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 149 AAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRQ 204

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 205 IPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG---- 260

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
              G+G +I       + P ++  +L++    
Sbjct: 261 --IGIGFWIWNEWNNLNVPNIITAILVIGVVG 290



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 14/196 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       L  + R +  +  PI+ +++ +  L +L
Sbjct: 109 NDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFRFIAAMFNPIISLLRPVSPLAWL 168

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS 
Sbjct: 169 PIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSE 220

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +     + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 221 FAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNL 274

Query: 237 DLLAILYAMLTMLGVI 252
           ++  I+ A+L +  V 
Sbjct: 275 NVPNIITAILVIGVVG 290


>gi|295095647|emb|CBK84737.1| nitrate ABC transporter, permease protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 292

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV +   +A++  IP+G  IG     S    P   LL       +
Sbjct: 91  PNDMGIGWNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAW 150

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 151 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 206

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 207 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 260

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ ++I+    L L 
Sbjct: 261 NILIAIVIIGVVGLLLE 277



 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ +       L  +      +  P++ +++ +  L +L   
Sbjct: 95  GIGWNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLPIG 154

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 155 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 206

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++ 
Sbjct: 207 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 260

Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            IL A++ +  V  L +Q   L+ R    W  K
Sbjct: 261 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 292


>gi|222082145|ref|YP_002541510.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
 gi|221726824|gb|ACM29913.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
          Length = 297

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 90/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   +   QD+  + W   I++ RV     +A+I  + +G  IG        + 
Sbjct: 81  SYDLIAYPFFYNGPQDIG-LAWRVLISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLD 139

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       N +     ++   + W ++ N   G    P D+
Sbjct: 140 PIFQILRTVPPLAWLPLSLAAFQ----NSSPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +    ++  I++P   PY  TG     G +W A + +E+ + G       G+
Sbjct: 196 RNVARVLRLNQIEFFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGI 249

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++      P++++ +  +      L++ +
Sbjct: 250 GFFIWDAWNSSRLPDIIVALTYIGITGFILDKLV 283



 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 21/254 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGII-----NILLHGIQETTVPRDIVDIVPITLDVH--SLPQYA 65
           R + P +  L+  + V  ++       L    Q      D++             L    
Sbjct: 44  RAVVPPLVVLIILLGVWQLLCEQPGASLPPPSQVWQESYDLIAYPFFYNGPQDIGLAWRV 103

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++ +   +   L  +S      L PI  I++++P L +L  ++  F N
Sbjct: 104 LISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLDPIFQILRTVPPLAWLPLSLAAFQN 163

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP+D   V+R  RL+  + F+ + V
Sbjct: 164 SSP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVARVLRLNQIEFFFRIMV 215

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L  I+ A+
Sbjct: 216 PAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPDIIVAL 269

Query: 246 LTMLGVIFLYDQLL 259
             +    F+ D+L+
Sbjct: 270 TYIGITGFILDKLV 283


>gi|83953214|ref|ZP_00961936.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1]
 gi|83842182|gb|EAP81350.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1]
          Length = 357

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V+   +IASI+ IP+GI  G     ++ + P  Q+   
Sbjct: 135 VRDRAYTGKPTYYDQIWTSIKTVLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   +       L  ++ +   + W  L N   G ++   D  
Sbjct: 195 VSPLAWLPIVTMIVSAVYSTNDGMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 254

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ VL +      L+R ++    ++ +    
Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYALQSMFTFSNNR 357



 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128
           +L   +I+ +        A  S      L P++ I + +  L +L    +    +Y    
Sbjct: 157 VLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ + K   L +P +
Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330

Query: 246 LTMLGVIFLYDQLL 259
           LT+  + FL D+++
Sbjct: 331 LTIGIIGFLLDRVM 344


>gi|289207851|ref|YP_003459917.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
 gi|288943482|gb|ADC71181.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
          Length = 311

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ I      +   DV  + W    ++ RV     +A +  I +G+ +G        + 
Sbjct: 95  TWELIVNPFYDYGGNDVG-MAWQLLASLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLD 153

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + P+ ++     + +       ++     W I+ N   G      D+
Sbjct: 154 PLFQVLRTVPPLAWLPISLAAFQASNPS----AIFVIFITAIWPIIINTSVGIRNISQDY 209

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA    + G+ ++  I+LP   PY  +G     G AW A + +E+   G       G+
Sbjct: 210 VNVARVLRLNGFEYFTKIMLPAAAPYVFSGLRIGIGLAWLAIVAAEMLIGG------VGI 263

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++       ++VL ++ +      L+R +
Sbjct: 264 GFFIWDAWNASMLSDIVLALVYVGLVGFFLDRLV 297



 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 21/252 (8%)

Query: 15  IFPNIFDLLAFVLVIGIIN----ILLHGIQETTVPRDIVDIVPI---TLDVHSLPQYASR 67
           + P +     F+L+  ++      +L G  +       + + P      +   +      
Sbjct: 60  VLPPVIVTAIFLLLWEMMTSSQGAVLPGPSQVITDTWELIVNPFYDYGGNDVGMAWQLLA 119

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     ++++       L  +S      L P+  +++++P L +L  ++  F    
Sbjct: 120 SLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLDPLFQVLRTVPPLAWLPISLAAFQASN 179

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        +AIF IF + +W +  +    + NI +D   V+R  RL+G++ F  + +P 
Sbjct: 180 P--------SAIFVIFITAIWPIIINTSVGIRNISQDYVNVARVLRLNGFEYFTKIMLPA 231

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + + +   W  +VA+EM++ G       GIG +I  A     L  I+ A++ 
Sbjct: 232 AAPYVFSGLRIGIGLAWLAIVAAEMLIGGV------GIGFFIWDAWNASMLSDIVLALVY 285

Query: 248 MLGVIFLYDQLL 259
           +  V F  D+L+
Sbjct: 286 VGLVGFFLDRLV 297


>gi|289208148|ref|YP_003460214.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
 gi|288943779|gb|ADC71478.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio
           sp. K90mix]
          Length = 281

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      +++RV++   +A++I IP G  IG  P ++    PF Q+L       + PL +
Sbjct: 86  IGIQLGYSIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLAL 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     + N+    ++   + W +L N   G ++  ND+  VA +  ++  R    +I
Sbjct: 146 FVIR----DSNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVI 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   + G AW   + +E+   G      TG+G YI           V+  
Sbjct: 202 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYIWNQWNNLDLASVIFA 255

Query: 559 VLIMCCFVLALN 570
           ++++      L+
Sbjct: 256 IVMIGIIGFLLD 267



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 14/192 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L    ++ L    +  +   S  L     P + +++ I  L ++   +    
Sbjct: 90  LGYSIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLALFVIR 149

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        + ++AIF IF   +W M  +    + ++  D   V+++  LS  +  + + 
Sbjct: 150 D--------SNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVI 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG YI       DL ++++A
Sbjct: 202 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYIWNQWNNLDLASVIFA 255

Query: 245 MLTMLGVIFLYD 256
           ++ +  + FL D
Sbjct: 256 IVMIGIIGFLLD 267


>gi|86607538|ref|YP_476300.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556080|gb|ABD01037.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|158819610|gb|ABW80922.1| permease protein NrtB [uncultured bacterium]
          Length = 319

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 10/194 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A ++ +  G+ IG    +   + P  Q+L   P   + P+ +
Sbjct: 123 LFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISL 182

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       + N     ++     W IL N + G    P D++ VA    ++GW+++  I+
Sbjct: 183 AAFR----DANPSAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILA 292

Query: 559 VLIMCCFVLALNRF 572
           ++ +    L L+R 
Sbjct: 293 LIYVGMVGLLLDRI 306



 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 22/254 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           RRI      +L  +++  II           L   Q+T  P           +   L   
Sbjct: 67  RRILLPATAILLVLILWQIIYSRPGANLPTPLQVWQDTWDPLIKDPFFDYGGNAKGLFWQ 126

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     ++ L   V   +   +R L   L PI  +++++P L +L  ++  F 
Sbjct: 127 IWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFR 186

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +  P        +AIF IF + +W +  +    +  IP+D   V+R  R+SGW+ F+ + 
Sbjct: 187 DANP--------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A
Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSRISEIILA 292

Query: 245 MLTMLGVIFLYDQL 258
           ++ +  V  L D++
Sbjct: 293 LIYVGMVGLLLDRI 306


>gi|121595153|ref|YP_987049.1| nitrate ABC transporter inner membrane subunit [Acidovorax sp.
           JS42]
 gi|120607233|gb|ABM42973.1| nitrate ABC transporter, inner membrane subunit [Acidovorax sp.
           JS42]
          Length = 313

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGL 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVTNILVA 284

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 285 IFVIGGVGLLLE 296



 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGLLV 176

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 177 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  IL
Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVTNIL 282

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A+  + GV  L +  L R    ++
Sbjct: 283 VAIFVIGGVGLLLEWALVRLATAFT 307


>gi|317405287|gb|EFV85615.1| nitrate transport system permease [Achromobacter xylosoxidans C54]
          Length = 280

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 11/216 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ +          D    I L   ++ RV+   ++A+++ IP+G  IG    +     
Sbjct: 67  LWQHLRDPFYDRGPNDKGIGIQL-AYSVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFD 125

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     +       ++   + W +L N   G  A   D+
Sbjct: 126 PFIQVLKPISPLAWMPLALYTIKDADTS----AIFVIFICSLWPMLVNTAFGVGAVRQDW 181

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  ++  R    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 182 LNVARTLEVSRLRTALLVILPAAAPTIMTGMRISVGIAWLVIVAAEMLIGG------TGI 235

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G ++       S   ++  +L +    + L+  L  
Sbjct: 236 GYFVWNEWNNLSIANIICAILFIGLIGMLLDTVLAR 271



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+  +++ L       L   SR +     P + +++ I  L ++   +    
Sbjct: 89  LAYSVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALY--- 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  A+ +AIF IF   +W M  +    +  + +D   V+R+  +S  +    + 
Sbjct: 146 -----TIKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVI 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM++ G       GIG ++        +  I+ A
Sbjct: 201 LPAAAPTIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICA 254

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  +  L D +L R
Sbjct: 255 ILFIGLIGMLLDTVLAR 271


>gi|226951848|ref|ZP_03822312.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC
           27244]
 gi|226837388|gb|EEH69771.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC
           27244]
          Length = 302

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +      I     ++  V+   +I+S+I IPVG+  G  P+    + P  Q+        
Sbjct: 82  FSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + P+V   V+  +++P   LS       + +   T W  L N + G      DF  V+  
Sbjct: 142 WLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKV 201

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            +++ +     I+LP I P   TG   + G  W   I +E+ +      +  GLG ++ +
Sbjct: 202 LNLSWYTHLTKIVLPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWD 255

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   + + V+ +     AL+R +
Sbjct: 256 EFQNGSSLSTSRIFVAVITIGLIGFALDRIM 286



 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 84/217 (38%), Gaps = 12/217 (5%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
               I     +       +   +L+A +IS +       L   S      L P++ I + 
Sbjct: 77  GSTAIFSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKP 136

Query: 110 IPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           I  L +L    +   +LY   + G   + + +   +    +W    +    +  I +D  
Sbjct: 137 ISPLAWLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFM 196

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
            VS+   LS +     + +P  +P +   + +S+  GW  ++A+EM+         PG+G
Sbjct: 197 NVSKVLNLSWYTHLTKIVLPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLG 250

Query: 227 SYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260
            ++    +         I  A++T+  + F  D+++ 
Sbjct: 251 KFVWDEFQNGSSLSTSRIFVAVITIGLIGFALDRIML 287


>gi|171914151|ref|ZP_02929621.1| nitrate/nitrite ABC transporter membrane protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 296

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 21/218 (9%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +++  V     +A +I  PVG  +G     ++   P  Q+L       + PL +
Sbjct: 88  ILRFTWLSLKLVAQGYFLALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPLGM 147

Query: 439 SCVSYYHL----------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
              S   +            +      +     W  + N   G  A P D+  VA    +
Sbjct: 148 ILFSGVKIMDSGGRTTFGASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVLKL 207

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +    +++P   PY  TG   + G AW   +  E+ +         G+G ++ +   
Sbjct: 208 SRTKTLWKVLVPATLPYMFTGFRLSLGIAWLVIVAVEMLTGR------PGVGGFLWQQYN 261

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             SF  ++L +L +      L+R +           L+
Sbjct: 262 ANSFAHIILCILTIGVVGYVLDRLM-----SLAESKLK 294



 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 12/207 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + ++   +   +     ++LL       L   S++      PI+ +++ +  L +L  
Sbjct: 86  QGILRFTWLSLKLVAQGYFLALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPL 145

Query: 119 TVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
            ++ F  +      G      ++ AA+F I    +W    +    +  +P+D   V++  
Sbjct: 146 GMILFSGVKIMDSGGRTTFGASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVL 205

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           +LS  +  W + VP ++P +     +S+   W  +VA EM+         PG+G ++   
Sbjct: 206 KLSRTKTLWKVLVPATLPYMFTGFRLSLGIAWLVIVAVEMLTG------RPGVGGFLWQQ 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   I+  +LT+  V ++ D+L+
Sbjct: 260 YNANSFAHIILCILTIGVVGYVLDRLM 286


>gi|118582203|gb|ABL07480.1| limonene hydroxylase CD3-2 [Enterobacter cowanii]
          Length = 306

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 13/267 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +PL      + R   +++         L     +  +  +              W++   
Sbjct: 32  APLVAKRAPVNRLRSMLQRFITAAIPGLLGAVVLIALWQVAALNSKGFPTPLQTWEAAKT 91

Query: 367 IVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +     Y    + + + W    ++ RV +   +A+++ IPVG  IG    I+    P   
Sbjct: 92  LFAEPFYIDGPNDMGIGWNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIA 151

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           LL       + P+ +                 +   + W ++ N   G    P D+  VA
Sbjct: 152 LLRPVSPLAWLPIGLLLFQRAEPASTWT----IFICSIWPMILNTAEGVMRIPQDYLNVA 207

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++ +   R I+ P + P+ +TG   + G AW   + +E+ + G       G+G +I
Sbjct: 208 RVLKLSEFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWI 261

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
                  +   +++ +L++    +AL 
Sbjct: 262 WNEWNNLNVQNIIIAILLIGVVGMALE 288



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 27/279 (9%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------- 56
           N L   + R I   I  LL  V++I +  +     +    P    +              
Sbjct: 42  NRLRSMLQRFITAAIPGLLGAVVLIALWQVAALNSKGFPTPLQTWEAAKTLFAEPFYIDG 101

Query: 57  -DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +      +  R+     ++ L       L  + R +  +  P++ +++ +  L +
Sbjct: 102 PNDMGIGWNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIALLRPVSPLAW 161

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS
Sbjct: 162 LPIGLLLFQRAEP--------ASTWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLS 213

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I      
Sbjct: 214 EFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 267

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            ++  I+ A+L +  V    +Q     ++  + +F  + 
Sbjct: 268 LNVQNIIIAILLIGVVGMALEQ----GLMAIARRFSYDT 302


>gi|83942159|ref|ZP_00954621.1| putative nitrate transporter [Sulfitobacter sp. EE-36]
 gi|83847979|gb|EAP85854.1| putative nitrate transporter [Sulfitobacter sp. EE-36]
          Length = 357

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    Y            ++  V+   +IASI+ IP+GI  G     ++ + P  Q+   
Sbjct: 135 VRDRAYTGKPTYYDQIWTSIKTVLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194

Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   +       L  ++ +   + W  L N   G ++   D  
Sbjct: 195 VSPLAWLPIVTMIVSAVYSTNDGMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 254

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ VL +      L+R ++    ++ +    
Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYALQSMFTFSNNR 357



 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128
           +L   +I+ +        A  S      L P++ I + +  L +L    +    +Y    
Sbjct: 157 VLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ + K   L +P +
Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330

Query: 246 LTMLGVIFLYDQLL 259
           LT+  + FL D+++
Sbjct: 331 LTIGIIGFLLDRVM 344


>gi|77456438|ref|YP_345943.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380441|gb|ABA71954.1| putative ABC sulfur transport system, membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 532

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 77/586 (13%), Positives = 179/586 (30%), Gaps = 81/586 (13%)

Query: 8   PPFISRRIFP-------NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           PP  SRR +P            L    +  +        ++      +V    I L    
Sbjct: 14  PPLKSRRTWPSLSHRVLPWILPLGLFALWWLAARNQWMSEQILPAPSLVWNSAIELSQGE 73

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+   ++  +    +       SRRL  ++ P    +  +P L ++   +
Sbjct: 74  LWSHLWISLQRLFWGLLAGVSAGAMLGAALGFSRRLERLIFPTFAGLAQVPTLAWIPLFM 133

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F           E   +  +  + V  +T      + +    L E +   RL      
Sbjct: 134 VFFGIG--------ETLKLVVLVKAIVVPVTLHTLVGVRDAQPKLREAAAVLRLPPRLLI 185

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P  +  + ++++ GW  ++A E++   +      GIG  +  A +   L  
Sbjct: 186 RRLVLPAALPAFMAGVRLALAAGWTSLLAVELLASSE------GIGYLMVWARQLFMLDI 239

Query: 241 ILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           +   ++ +  +    D+   LL + ++ W +    E                R+      
Sbjct: 240 VFVCIVVIGLIGVAMDRGIGLLDKKLVHWPHPATAE---------------IRRGPRYEG 284

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                          + +L      I  +   +   +    +      +    ++ G+A+
Sbjct: 285 WQRVQPWLLPLALFALWQLAVDQQWIDANILVSPWVVLEATKNG----LLDGTLISGMAL 340

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +     G ++       +  ++ L   +                               
Sbjct: 341 SLGRTLGGLLIGGGLGLVLGLLLGLSRTS----------------------------ERV 372

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L       + PL+ +      L   +     +     + +        +    
Sbjct: 373 LGPTLAALRQIAIFAWVPLLTAWFGLGELAKWV----FVALAAFFPLFVATQRSVANLSP 428

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A    ++  +    ++LPG  P    G   +   AW  +I +E            
Sbjct: 429 QLNEAAQVLRLSLAQRLLRLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYFM-----PSNG 483

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G+G+ +  + +      ++ G+L++      LN  +   L +  TR
Sbjct: 484 GIGSQMIGAQQLLRMDLIMAGMLLVGLTGALLN-LIGQRLEIRATR 528



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 14/259 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R+ P +  L  F L    ++           P  +++     L   +L    + +  R 
Sbjct: 286 QRVQPWLLPLALFALWQLAVDQQWIDANILVSPWVVLEATKNGLLDGTLISGMALSLGRT 345

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I      V   L   SR    VL P L  ++ I I  ++     +F      K +
Sbjct: 346 LGGLLIGGGLGLVLGLLLGLSRTSERVLGPTLAALRQIAIFAWVPLLTAWFGLGELAKWV 405

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LAA F +F +          +S+ N+   L E ++  RLS  Q+   L +P + PG+
Sbjct: 406 FVALAAFFPLFVA--------TQRSVANLSPQLNEAAQVLRLSLAQRLLRLVLPGAAPGI 457

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S+   W   + +E  +  +      GIGS +  A +   +  I+  ML +    
Sbjct: 458 FAGLRLSLIYAWLGTIGAEYFMPSN-----GGIGSQMIGAQQLLRMDLIMAGMLLVGLTG 512

Query: 253 FLYDQLLFRPMIVWSNKFR 271
            L + L+ + + + + ++R
Sbjct: 513 ALLN-LIGQRLEIRATRWR 530


>gi|222111494|ref|YP_002553758.1| nitrate ABC transporter inner membrane subunit [Acidovorax ebreus
           TPSY]
 gi|221730938|gb|ACM33758.1| nitrate ABC transporter, inner membrane subunit [Acidovorax ebreus
           TPSY]
          Length = 313

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGL 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVTNILVA 284

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 285 IFVIGGVGLLLE 296



 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGLLV 176

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 177 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  IL
Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVTNIL 282

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A+  + GV  L +  L R    ++
Sbjct: 283 VAIFVIGGVGLLLEWALVRLATAFT 307


>gi|325109807|ref|YP_004270875.1| binding-protein-dependent transporters inner membrane component
           [Planctomyces brasiliensis DSM 5305]
 gi|324970075|gb|ADY60853.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces brasiliensis DSM 5305]
          Length = 537

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 86/241 (35%), Gaps = 34/241 (14%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    Y     +      ++  V     +A+ I +P+GI  G      + + PF  L   
Sbjct: 296 IAASEYAKPWTLPMQIVRSVACVFAGFFLATAIAVPIGILCGVSTTFMAAVTPFIALFKP 355

Query: 428 FPANVFFPLVVSCVSYYHLNPN-----------------------LWLSLLMIFGTQWYI 464
               V+ P+ +  V     +P+                       +  ++ +   + W  
Sbjct: 356 VSPIVWLPISLIIVGGVITDPDDHWLITTLAELPLIGWLQINPAFIASAITVALCSLWPT 415

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L N   G ++   D   VA    ++ ++    I++P   P    G   + G  W   I +
Sbjct: 416 LVNTALGVASIDKDHLNVARVLRLSFFQRLTKIVIPSALPLIFAGLRISLGVGWMVLIAA 475

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNR--FLWHPLYL 579
           E+ S       + G+G ++ +    GS   F ++ + V ++    L L+R   ++  L  
Sbjct: 476 ELLS------SSEGIGKFVWDMFNNGSSATFAQMFVVVFVVGAIGLLLDRIMIVFQRLVS 529

Query: 580 Y 580
           +
Sbjct: 530 F 530



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 87/233 (37%), Gaps = 30/233 (12%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +LP    R+   + +   ++         L   S      + P + + + +  + +L 
Sbjct: 304 PWTLPMQIVRSVACVFAGFFLATAIAVPIGILCGVSTTFMAAVTPFIALFKPVSPIVWLP 363

Query: 118 FTVVYFMNLYPGK-------------------VIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            +++    +                       +  A +A+   +    +W    +    +
Sbjct: 364 ISLIIVGGVITDPDDHWLITTLAELPLIGWLQINPAFIASAITVALCSLWPTLVNTALGV 423

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I +D   V+R  RLS +Q+   + +P ++P +   + +S+  GW  ++A+E++   + 
Sbjct: 424 ASIDKDHLNVARVLRLSFFQRLTKIVIPSALPLIFAGLRISLGVGWMVLIAAELLSSSE- 482

Query: 219 VIPLPGIGSYIALAIKEQD---LLAILYAMLTMLGVIFLYDQLL--FRPMIVW 266
                GIG ++              +   +  +  +  L D+++  F+ ++ +
Sbjct: 483 -----GIGKFVWDMFNNGSSATFAQMFVVVFVVGAIGLLLDRIMIVFQRLVSF 530


>gi|220909929|ref|YP_002485240.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7425]
 gi|219866540|gb|ACL46879.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7425]
          Length = 280

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V  ++A+++ I +GI IG    I   +    Q+L   P   + PL +
Sbjct: 83  LFWHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPLSL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +       ++     W I+ N   G    P D++ VA    ++   ++  I+
Sbjct: 143 AMFR----DNQPSAIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVEYFLNIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + +E+   G       G+G +I ++       E++L 
Sbjct: 199 LPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIILA 252

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L++ +
Sbjct: 253 LIYVGIVGFILDKLV 267



 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 92/201 (45%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+    +++ +       L   +  +   L  +  +++++P L +L  
Sbjct: 81  KGLFWHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++  F +  P        +AIF IF + +W +  +    +  +P+D   V++  +LS  +
Sbjct: 141 SLAMFRDNQP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVE 192

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + + +   W  +VA+EM++ G       GIG +I  A     +
Sbjct: 193 YFLNILLPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 246

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V F+ D+L+
Sbjct: 247 SEIILALIYVGIVGFILDKLV 267


>gi|148256707|ref|YP_001241292.1| putative nitrate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146408880|gb|ABQ37386.1| putative nitrate ABC transporter (permease protein) (ntrB-like
           protein) [Bradyrhizobium sp. BTAi1]
          Length = 279

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV++  +IA  I IP+G  IG  P +S
Sbjct: 62  VGAKLWEHLKRPFYDNGPNDKGLGIQL-AFSLGRVMLGYLIAVAIAIPLGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q++       + PL +  +     + +L    ++   + W +L N   G ++ 
Sbjct: 121 KALDPFIQIMKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTAFGVASV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V++ +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQILAR 270



 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 23/236 (9%)

Query: 35  LLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFV 85
              G      P D+   +   L         +   L    + +  R++   +I++     
Sbjct: 49  ATQGKSAMPGPLDVGAKLWEHLKRPFYDNGPNDKGLGIQLAFSLGRVMLGYLIAVAIAIP 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L   S  +   L P + IM+ I  L ++   +          +  + L+AIF IF  
Sbjct: 109 LGFLIGMSPLMSKALDPFIQIMKPISPLAWMPLALY--------TIKDSSLSAIFVIFIC 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            VW M  +    + ++ ++   V+R+  +   ++ + + +P + P ++  M +S+   W 
Sbjct: 161 SVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWL 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +VA+EM+V G       GIG ++        +  ++ A+L +  V  + DQ+L R
Sbjct: 221 VIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQILAR 270


>gi|110681288|ref|YP_684295.1| nitrate ABC transporter, permease component [Roseobacter
           denitrificans OCh 114]
 gi|109457404|gb|ABG33609.1| nitrate ABC transporter, permease component [Roseobacter
           denitrificans OCh 114]
          Length = 357

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 18/229 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V +  Y            ++  V    +IASI+ IP+GI  G     ++ + P  Q+   
Sbjct: 135 VRNRIYTGKPTYYDQIWTSIKTVFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194

Query: 428 FPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                + P+V   VS  +   + W        ++ +   + W  L N   G S+   D  
Sbjct: 195 VSPLAWLPIVTMIVSAVYTTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 254

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     ++LP   P   TG   + G  W   I +E+ +      +  GLG
Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584
            ++ +  + G   S   +++ V  +      L+R ++    ++ +    
Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYALQSMFTFSNNR 357



 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +    +I+ +        A  S      L P++ I + +  L +L    +    +Y    
Sbjct: 157 VFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L +   +    +W    +    + +I +DL  VSR  +++ + K   L +P +
Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245
           +P +   + +S+  GW  ++A+EM+         PG+G ++    +    Q L  I+ A+
Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330

Query: 246 LTMLGVIFLYDQLL 259
            T+  + FL D+++
Sbjct: 331 FTIGIIGFLLDRVM 344


>gi|221069138|ref|ZP_03545243.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220714161|gb|EED69529.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 330

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLPIGL 191

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 302 IFVIGIVGLVLE 313



 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 18/213 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLPIGLLV 193

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            A+  +  V  + +      ++  ++ F  E  
Sbjct: 300 IAIFVIGIVGLVLEWA----LVKLASAFTFEEV 328


>gi|170077483|ref|YP_001734121.1| sulfonate/nitrate transport system permease protein [Synechococcus
           sp. PCC 7002]
 gi|169885152|gb|ACA98865.1| sulfonate/nitrate transport system permease protein [Synechococcus
           sp. PCC 7002]
          Length = 278

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 12/231 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S  + I        + +   W             D L + W   I++ RV +  + AS 
Sbjct: 45  ISARIGILANMPTASLTLKELWWWTTNPFFDNGPND-LGIGWNLLISLRRVAIGYLAASC 103

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI IG  P       PF QLL       + PL +  +     +       ++   
Sbjct: 104 VAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPLGLYVLR----DSEQTGVFIIFIS 159

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + W  L N   G +    ++ +VA +   + +R    +I+P   P  ++G   + G AW 
Sbjct: 160 SIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVIIPAALPNILSGLRISMGIAWL 219

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +E+          TGLG +I         P +++ +LI+    L L+
Sbjct: 220 VIVAAEMLLG-------TGLGYFIWNEWNNLYIPNILVAILIIGLVGLILD 263



 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 33/254 (12%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--------------- 65
           + LAF L +  + + L G + +     + ++   +L +  L  +                
Sbjct: 25  NFLAFALFVASLIVFLGGWEISARIGILANMPTASLTLKELWWWTTNPFFDNGPNDLGIG 84

Query: 66  ---SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+    + +         L   S        P + +++ +  L +L   +  
Sbjct: 85  WNLLISLRRVAIGYLAASCVAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPLGLYV 144

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +        +E   +F IF S +W    +    + N+ ++  +V+++   S ++  + 
Sbjct: 145 LRD--------SEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFK 196

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  + +SM   W  +VA+EM++         G+G +I        +  IL
Sbjct: 197 VIIPAALPNILSGLRISMGIAWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIPNIL 249

Query: 243 YAMLTMLGVIFLYD 256
            A+L +  V  + D
Sbjct: 250 VAILIIGLVGLILD 263


>gi|294649103|ref|ZP_06726545.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292824986|gb|EFF83747.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 302

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +      I     ++  V+   +I+S+I IPVG+  G  P+    + P  Q+        
Sbjct: 82  FSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + P+V   V+  +++P   LS       + +   T W  L N + G      DF  V+  
Sbjct: 142 WLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKV 201

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            +++ +     I+LP I P   TG   + G  W   I +E+ +      +  GLG ++ +
Sbjct: 202 LNLSWYTHLTKIVLPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWD 255

Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573
             + G   S   + + V+ +     AL+R +
Sbjct: 256 EFQNGSSLSTSRIFVAVITIGLIGFALDRIM 286



 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 12/217 (5%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
               I     +       +   +L+A +IS +       L   S      L P++ I + 
Sbjct: 77  GSTAIFSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKP 136

Query: 110 IPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           I  L +L    +   +LY   + G   + + +   +    +W    +    +  I +D  
Sbjct: 137 ISPLAWLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFM 196

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
            VS+   LS +     + +P  +P L   + +S+  GW  ++A+EM+         PG+G
Sbjct: 197 NVSKVLNLSWYTHLTKIVLPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLG 250

Query: 227 SYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260
            ++    +         I  A++T+  + F  D+++ 
Sbjct: 251 KFVWDEFQNGSSLSTSRIFVAVITIGLIGFALDRIML 287


>gi|37521137|ref|NP_924514.1| nitrate/nitrite transport system permease protein [Gloeobacter
           violaceus PCC 7421]
 gi|35212133|dbj|BAC89509.1| nitrate/nitrite transport system permease protein [Gloeobacter
           violaceus PCC 7421]
          Length = 281

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 10/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+++ + VGI +G        + P  Q+L   P   + P+ +
Sbjct: 86  IAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAWLPIAL 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +S      N     ++     W I+ N   G  + P D++ VAS   ++   ++  I+
Sbjct: 146 AALS----QANPSAIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPTYFFQIL 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    Y  TG   A G AW A + +E+ + G       G+G +I +S       +++L 
Sbjct: 202 LPSAASYIFTGLRIAVGLAWLAIVAAEMLTGG------VGIGFFIWDSYNSSRMADIILA 255

Query: 559 VLIMCCFVLALNRFLW 574
           VL +      L+R ++
Sbjct: 256 VLCVGLVGFVLDRMIY 271



 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +    + +  R+     ++ +       L    R   + L PI  ++++IP L +L   
Sbjct: 85  GIAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAWLPIA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +       P        +AIF IF + VW +  +    + + P+D   V+   +LS    
Sbjct: 145 LAALSQANP--------SAIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPTY 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +P +   +   + +++   W  +VA+EM+  G       GIG +I  +     + 
Sbjct: 197 FFQILLPSAASYIFTGLRIAVGLAWLAIVAAEMLTGGV------GIGFFIWDSYNSSRMA 250

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+L +  V F+ D+++
Sbjct: 251 DIILAVLCVGLVGFVLDRMI 270


>gi|261856785|ref|YP_003264068.1| nitrate ABC transporter inner membrane subunit [Halothiobacillus
           neapolitanus c2]
 gi|261837254|gb|ACX97021.1| nitrate ABC transporter, inner membrane subunit [Halothiobacillus
           neapolitanus c2]
          Length = 280

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++A I+ IP+G  IG  P +   + P+ QLL       + PL +  +    
Sbjct: 92  SLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALYTIK--- 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            + N     ++   + W ++ N   G ++   D+  VA +  +T  +    +ILP   P 
Sbjct: 149 -DANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAPT 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   + G AW   + +E+   G      TG+G ++       +   V+  + ++   
Sbjct: 208 ILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLNLANVIFAIFMIGVV 261

Query: 566 VLALNRFL 573
            + L+   
Sbjct: 262 GMLLDAIF 269



 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 87/195 (44%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            S +  R+L+  +++++       L   S  +   L P + +++ I  L ++   +    
Sbjct: 89  LSWSLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALY--- 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  A  ++IF IF   +W M  +    + ++ +D   V+++  ++  +    + 
Sbjct: 146 -----TIKDANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVI 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA+EM+V G       GIG ++       +L  +++A
Sbjct: 201 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLNLANVIFA 254

Query: 245 MLTMLGVIFLYDQLL 259
           +  +  V  L D + 
Sbjct: 255 IFMIGVVGMLLDAIF 269


>gi|291617213|ref|YP_003519955.1| NrtB [Pantoea ananatis LMG 20103]
 gi|291152243|gb|ADD76827.1| NrtB [Pantoea ananatis LMG 20103]
          Length = 312

 Score =  153 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 13/244 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---Q 374
           R    +R         LC    +  +  I              W +   +     Y    
Sbjct: 53  RPPARLRPLLQRCIPALCGVLLLLLVWQIAALYSQGFPGPYATWAAAKVLFADPFYNNGP 112

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   + W    ++ RV +   +A+++ IP G  +G    ++    P   LL       + 
Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ +          +      +   + W ++ N   G    P D+  VA    ++ W   
Sbjct: 173 PIGLLLFQRAEPASSWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIM 228

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +   
Sbjct: 229 RRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVEN 282

Query: 555 VVLG 558
           +++ 
Sbjct: 283 ILIA 286



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 14/188 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       L  +   +  +  PI+ +++ +  L +L
Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS 
Sbjct: 173 PIGLLLFQRAEP--------ASSWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 224

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W     +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 225 WTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNL 278

Query: 237 DLLAILYA 244
           ++  IL A
Sbjct: 279 NVENILIA 286


>gi|254458247|ref|ZP_05071673.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales
           bacterium GD 1]
 gi|207085083|gb|EDZ62369.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales
           bacterium GD 1]
          Length = 289

 Score =  153 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 10/181 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD   + W    ++ RV    ++A ++ +P+G+++G        + PF Q+        +
Sbjct: 85  QDDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAW 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++        + N+     +   + W I+ N   G  +   D+  VA     +    
Sbjct: 145 LPLLLFIFQ----DINMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLEK 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              IILP   PY  TG   + G AW   + +E+ + G       G+G +I +     ++ 
Sbjct: 201 IVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNLNYH 254

Query: 554 E 554
            
Sbjct: 255 N 255



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   +      +  R+ +  V+++L           S+     L P + I + +  L +L
Sbjct: 86  DDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAWL 145

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F +          + AI  IF + +W +  +    + ++  D   V++  R S 
Sbjct: 146 PLLLFIFQD--------INMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSP 197

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +K   + +P S+P +   M +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 198 LEKIVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 251

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +   I+  ++ +  + +  D ++ R
Sbjct: 252 NYHNIIIGIIVVGLIGYFLDLIMGR 276


>gi|74318291|ref|YP_316031.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259]
 gi|74057786|gb|AAZ98226.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259]
          Length = 299

 Score =  153 bits (388), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 88/214 (41%), Gaps = 13/214 (6%)

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W++   +     Y    +   + W    +++RV V    A+ + IP+G  IG    ++ 
Sbjct: 83  TWEAARALFADPFYDNGPNDQGIGWNVLNSLYRVGVGFGAAAAVGIPLGFMIGRFDFLNR 142

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P   +L       + P+ +  +             ++   + W ++ N  AG    P
Sbjct: 143 MLAPIIGILRPVSPLAWLPIGLLVLQ----KAEPASIWVIFISSIWPMVLNTAAGVQRVP 198

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++ +R +  I+ P + P+ +TG   + G AW   + +E+ + G      
Sbjct: 199 QDYMNVARVLKLSEFRVFTRILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTGG------ 252

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            G+G ++ +     +   +++ + I+    LAL 
Sbjct: 253 VGIGFWVWDEWNNLNVAHIIIAIFIVGLVGLALE 286



 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 24/271 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLP 62
             + +   P +  LL F  +  ++      +   T   +    +          +   + 
Sbjct: 47  ATLVKNAIPPLLGLLLFTALWALVANSGQTLPGPTETWEAARALFADPFYDNGPNDQGIG 106

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+      +         +  +   L  +L PI+ I++ +  L +L   ++ 
Sbjct: 107 WNVLNSLYRVGVGFGAAAAVGIPLGFMIGRFDFLNRMLAPIIGILRPVSPLAWLPIGLLV 166

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P        A+I+ IF S +W M  +    +  +P+D   V+R  +LS ++ F  
Sbjct: 167 LQKAEP--------ASIWVIFISSIWPMVLNTAAGVQRVPQDYMNVARVLKLSEFRVFTR 218

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 219 ILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVAHII 272

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
            A+  +  V    +Q     ++V + +F  E
Sbjct: 273 IAIFIVGLVGLALEQ----GLMVLAKRFSYE 299


>gi|223937679|ref|ZP_03629581.1| nitrate ABC transporter, inner membrane subunit [bacterium
           Ellin514]
 gi|223893651|gb|EEF60110.1| nitrate ABC transporter, inner membrane subunit [bacterium
           Ellin514]
          Length = 261

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 12/209 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL-V 437
           ++     ++  V    ++A  +  P+G  +G     +    P  Q+L       + PL +
Sbjct: 62  ILRFTWYSLVLVAKGYVLALALGTPIGFCLGLSKTFTKIFDPIIQVLRPVSPLAWLPLGL 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +S+      L     +     W  + N   G  A P D+  VA    ++  +    +
Sbjct: 122 ILFLSFGKQASELGALFTIAICAMWPTVMNTAVGVRAIPQDYLNVARVLKLSRSKTLFKV 181

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   PY  TG   + G AW   + +E+ +         G+G ++ +      +  ++L
Sbjct: 182 LIPATLPYMFTGFRLSLGIAWLVIVAAEMLTGR------PGVGGFLWQEYNALIYEHIIL 235

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            ++++      L+R +         +  +
Sbjct: 236 CIIVIGLVGFVLDRLM-----SLAEKRFK 259



 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 102/256 (39%), Gaps = 24/256 (9%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-------PITLDV--------HSLPQ 63
             D L   L+     I +  I   T  +++   +       P  ++           + +
Sbjct: 5   KLDWLILPLIGAACVIAIWAISSATWAKELPSPLKTWQSSKPYIMEPFAKRGEMDQGILR 64

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   + + +    V++L            S+    +  PI+ +++ +  L +L   ++ F
Sbjct: 65  FTWYSLVLVAKGYVLALALGTPIGFCLGLSKTFTKIFDPIIQVLRPVSPLAWLPLGLILF 124

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           ++        +EL A+F I    +W    +    +  IP+D   V+R  +LS  +  + +
Sbjct: 125 LSFG---KQASELGALFTIAICAMWPTVMNTAVGVRAIPQDYLNVARVLKLSRSKTLFKV 181

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +     +S+   W  +VA+EM+         PG+G ++           I+ 
Sbjct: 182 LIPATLPYMFTGFRLSLGIAWLVIVAAEMLTG------RPGVGGFLWQEYNALIYEHIIL 235

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  V F+ D+L+
Sbjct: 236 CIIVIGLVGFVLDRLM 251


>gi|91776523|ref|YP_546279.1| nitrate transport permease [Methylobacillus flagellatus KT]
 gi|91710510|gb|ABE50438.1| nitrate transport permease [Methylobacillus flagellatus KT]
          Length = 272

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV V   +A+++ IP G  IG  P     + PF Q+L       + P+ +  +    
Sbjct: 84  SLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMPIALYTIKDST 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       ++   + W +L N   G +    ++  VA +  +   R    +ILP   P 
Sbjct: 144 ASG----IFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAPT 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG   + G AW   + +E+   G      TG+G ++       S   V+  +L++   
Sbjct: 200 IVTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAILMIGVV 253

Query: 566 VLALN 570
            + L+
Sbjct: 254 GMVLD 258



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 14/191 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R+     ++ L    +  L   S     VL P + I++ I  L ++   +     
Sbjct: 82  AHSLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMPIALY---- 137

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                +  +  + IF IF   +W M  +    + N+ ++   V+R+  +   +K + + +
Sbjct: 138 ----TIKDSTASGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVIL 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  M +SM   W  +VA+EM+V G       GIG ++        L  +++A+
Sbjct: 194 PAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWNNLSLANVIFAI 247

Query: 246 LTMLGVIFLYD 256
           L +  V  + D
Sbjct: 248 LMIGVVGMVLD 258


>gi|94309221|ref|YP_582431.1| nitrate transport permease [Cupriavidus metallidurans CH34]
 gi|93353073|gb|ABF07162.1| ABC-type transporter, permease component: NitT family [Cupriavidus
           metallidurans CH34]
          Length = 303

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 85/212 (40%), Gaps = 13/212 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           G  W +   +     Y    +   + W    ++ RV     +A+++ IP G  +G    +
Sbjct: 83  GATWNAAVPLFADPFYRNGPNDQGIGWNVLASLARVAAGFGLAAVVGIPAGFLLGRFAFL 142

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P   LL       + P+ +          N      +   + W ++ N   G + 
Sbjct: 143 NAMASPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMIINTAVGVTR 198

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ W+ +R+++ P + PY +TG   + G AW   + +E+ + G    
Sbjct: 199 VPQDYLNVARVLDLSEWKIFRHVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 254

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             TG+G ++ +         +V+ + I+    
Sbjct: 255 --TGIGFWLWDEWNNLKVEHIVIAIFIIGVVG 284



 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 94/242 (38%), Gaps = 20/242 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLH------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           P +     FVLV   I  L+             VP           +   +      +  
Sbjct: 57  PPLIGFALFVLVWHGIATLIPSIPTPGATWNAAVPLFADPFYRNGPNDQGIGWNVLASLA 116

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   ++ +       L  +   L  +  P++ +++ +  L +L   ++ F    P  
Sbjct: 117 RVAAGFGLAAVVGIPAGFLLGRFAFLNAMASPVISLLRPVSPLAWLPIGLLLFKAANP-- 174

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F ++  P  +P
Sbjct: 175 ------AAIWAIFICSIWPMIINTAVGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLP 228

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  +  
Sbjct: 229 YMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFIIGV 282

Query: 251 VI 252
           V 
Sbjct: 283 VG 284


>gi|188583848|ref|YP_001927293.1| nitrate ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347346|gb|ACB82758.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           populi BJ001]
          Length = 279

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W  +          D    I L   ++ RV +   +A ++ IPVG  IG  P +S
Sbjct: 62  VGATIWHHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+ Q+L       + PL +  +     + +L    ++   + W +L N + G +  
Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTVFGVAGT 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RKEWLNVARTLEVGPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V+  +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+     +++L       L   S  +   L P + I++ +  L ++   +    
Sbjct: 88  LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + L+AIF IF   VW M  +    +    ++   V+R+  +   ++ + + 
Sbjct: 145 -----TIKDSSLSAIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVI 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +S+   W  +VA+EM+V G       GIG ++        +  ++ +
Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 253

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L +  V  + DQLL R
Sbjct: 254 ILVIGLVGMVLDQLLAR 270


>gi|121604319|ref|YP_981648.1| nitrate ABC transporter inner membrane subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120593288|gb|ABM36727.1| nitrate ABC transporter, inner membrane subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 311

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 18/265 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            +T    +  F   +L++        +L + W  V  G    I      ++     + D 
Sbjct: 43  PKTAARPQRDFSALWLRVLPPLLGLALLVLVWELVSLGTKASIPSPKDTFLQAVVLFSDP 102

Query: 377 LY--------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            Y        V W    ++ RV +   +A+I+ IPVG  IG    +S+   P   L+   
Sbjct: 103 FYSNGPNDQGVGWNVLSSLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPV 162

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + P+ +          +      +   + W ++ N   G    P D+  VA   ++
Sbjct: 163 SPLAWLPIGLLVFK----GADPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNL 218

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W+    I+ P + PY +TG   A G AW   + +E+ + G       G+G ++ +   
Sbjct: 219 SEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWN 272

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
             +   +++ + ++    L L   L
Sbjct: 273 NLNVKNIIIAIFVIGIVGLMLEYAL 297



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 18/215 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ +       +  +   L  +  P++ +M+ +  L +L   ++ 
Sbjct: 115 WNVLSSLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPVSPLAWLPIGLLV 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 175 FKGADP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTK 226

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 227 ILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 280

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
            A+  +  V  + +      +I  +  F  E    
Sbjct: 281 IAIFVIGIVGLMLEYA----LIKLATAFTFEEVKS 311


>gi|196052748|gb|ACG69439.1| ABC transporter inner membrane subunit protein [Pseudomonas
           pseudoalcaligenes]
          Length = 280

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 12/190 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+   ++A+++ IPV   IG  P +   + PF Q+L       + PL +  +    
Sbjct: 90  SLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG--IF 503
            +       ++   + W +L N   G +    D+  VA +  ++  R    +ILP     
Sbjct: 150 TS----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRAM 205

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G AW   +  E+   G      TG+G Y+       +   V+  +L++ 
Sbjct: 206 PTILTGMRISVGIAWLVIVAPEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIG 259

Query: 564 CFVLALNRFL 573
              + L+  L
Sbjct: 260 VVGMLLDLLL 269



 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+  +++ L     + +   S  +   L P + I++ I  L ++   +    
Sbjct: 87  LAHSLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIK 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        ++ +AIF IF   VW M  +    +  + RD   V+R+  LS  +  + + 
Sbjct: 147 D--------SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVI 198

Query: 185 VPF--SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P   +MP ++  M +S+   W  +VA EM+V G       GIG Y+       +L +++
Sbjct: 199 LPARRAMPTILTGMRISVGIAWLVIVAPEMLVGGT------GIGYYVWNEWNNLNLASVI 252

Query: 243 YAMLTMLGVIFLYDQLL 259
           +++L +  V  L D LL
Sbjct: 253 FSILMIGVVGMLLDLLL 269


>gi|124266584|ref|YP_001020588.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1]
 gi|124259359|gb|ABM94353.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1]
          Length = 305

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 17/269 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYI 367
              K    L    F +    L++      + +L   W  +             W     +
Sbjct: 36  PSAKPAARLPAEPFDWRGLALRVLPPIFGAGLLIGIWALLTMNGGAFPTPAATWAEFAKL 95

Query: 368 VNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +   Y    +   + W    ++ RV +   +A+++ IP G  +G    ++  I P   L
Sbjct: 96  FSDPFYDNGPNDQGIGWNVLFSLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISL 155

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       + P+ +          N      +   + W ++ N   G    P D+  VA 
Sbjct: 156 LRPVSPLAWLPIGLLVFKAA----NPAAIWTIFICSIWPMIINTAVGVQRVPQDYLNVAR 211

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
             +++ W+    I+ P + PY +TG   + G AW   + +E+ + G       G+G ++ 
Sbjct: 212 VLNLSEWKVMTRILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGG------VGIGFWVW 265

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +     +   +++ + ++    L L + L
Sbjct: 266 DEWNNLNVAHILIAIFVIGIVGLLLEQAL 294



 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 102/257 (39%), Gaps = 24/257 (9%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62
           ++ R+ P IF     + +  ++ +  +G    T      +   +  D           + 
Sbjct: 54  LALRVLPPIFGAGLLIGIWALLTM--NGGAFPTPAATWAEFAKLFSDPFYDNGPNDQGIG 111

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   +  ++ P++ +++ +  L +L   ++ 
Sbjct: 112 WNVLFSLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISLLRPVSPLAWLPIGLLV 171

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 172 FKAANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYLNVARVLNLSEWKVMTR 223

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  IL
Sbjct: 224 ILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVAHIL 277

Query: 243 YAMLTMLGVIFLYDQLL 259
            A+  +  V  L +Q L
Sbjct: 278 IAIFVIGIVGLLLEQAL 294


>gi|330718294|ref|ZP_08312894.1| OpuABC protein [Leuconostoc fallax KCTC 3537]
          Length = 569

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ A VISL+       LAAKS R   ++ PILD MQ++P   +L  
Sbjct: 86  QGLWEDLMNTLTLVVMASVISLIIGVPLGILAAKSDRARAIIQPILDFMQTMPGFVYLIP 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA     +  M       +  +P DL E + SF  + WQ
Sbjct: 146 AVAFFG---IGVVPGVFASIIFA-----LPPMVRMTNLGIRQVPTDLVEAADSFGSTPWQ 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   L +P +   ++     ++      VV + MI         PG+G  +  A++  D+
Sbjct: 198 KLIKLELPTAKNTILAGANQTIMLALSMVVTASMI-------GAPGLGRGVLAAVQHADV 250

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     L ++ +  + D+ 
Sbjct: 251 GSGFVNGLGLVILAIIIDRF 270



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 18/213 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           A+  +  + N   ++D++        T+  VV+  +I+ II +P+GI         + IQ
Sbjct: 76  AFFGLVLVANQGLWEDLMN-------TLTLVVMASVISLIIGVPLGILAAKSDRARAIIQ 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P    +   P  V+    V+      +       +         ++     G    P D 
Sbjct: 129 PILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTNLGIRQVPTDL 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A SF  T W+    + LP      + GA      A +  + + +           GL
Sbjct: 185 VEAADSFGSTPWQKLIKLELPTAKNTILAGANQTIMLALSMVVTASMIG-------APGL 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +  + +        +  L +    + ++RF
Sbjct: 238 GRGVLAAVQHADVGSGFVNGLGLVILAIIIDRF 270


>gi|157145548|ref|YP_001452867.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895]
 gi|157082753|gb|ABV12431.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV +   +A+++ IP+G  IG     S    P   LL       +
Sbjct: 92  PNDMGIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAW 151

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    +  W  
Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTV 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 261

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++ ++I+    L L + L
Sbjct: 262 NILIAIVIIGVVGLLLEQGL 281



 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 18/213 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +      +  P++ +++ +  L +L   
Sbjct: 96  GIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLPIG 155

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +L  W  
Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTV 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++ 
Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 261

Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            IL A++ +  V  L +Q   L+ R    W  K
Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLVARRF-SWQEK 293


>gi|87302043|ref|ZP_01084877.1| permease protein [Synechococcus sp. WH 5701]
 gi|87283611|gb|EAQ75566.1| permease protein [Synechococcus sp. WH 5701]
          Length = 265

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 9/193 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+++ I  GI +G  P ++    P  Q L       + P+ +
Sbjct: 69  LFWQTMASLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFLRMVAPLAWVPIAL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           ++     W IL N   G    P D++ VA    ++  R++  ++
Sbjct: 129 VIFQ----KNQPAAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGRFFTKVL 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   + G AW A I +E+   G +     G+G +I ++ ++    ++VL 
Sbjct: 185 LPSALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIVLA 239

Query: 559 VLIMCCFVLALNR 571
           V+ +    L L+R
Sbjct: 240 VIWIGAVGLLLDR 252



 Score =  143 bits (361), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 86/199 (43%), Gaps = 13/199 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+     ++ L           S  L     P+   ++ +  L ++  
Sbjct: 67  KGLFWQTMASLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFLRMVAPLAWVPI 126

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F    P        AAIF IF + VW +  +  + +  IP+D   V+   ++S  +
Sbjct: 127 ALVIFQKNQP--------AAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGR 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +S+   W  ++A+E+++ G     + GIG +I  A ++  +
Sbjct: 179 FFTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYV 233

Query: 239 LAILYAMLTMLGVIFLYDQ 257
             I+ A++ +  V  L D+
Sbjct: 234 SDIVLAVIWIGAVGLLLDR 252


>gi|307151074|ref|YP_003886458.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           7822]
 gi|306981302|gb|ADN13183.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7822]
          Length = 279

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 12/250 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIA 397
           + + +       +          ++ YI N F  +    L + WL   ++ RV++  +++
Sbjct: 39  ILWWIVALLNPDLMPTPPEALVANLDYIFNPFYVRGPGNLGIGWLLIASLRRVLIGFVLS 98

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ IPVG  IG      S + P  Q+        + P+ ++         +     ++ 
Sbjct: 99  AMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWLPISLAIF----NQADPSAIFVIF 154

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + W  + N   G S+  +D+ +VA    +  WR    IILP   PY  TG   + G A
Sbjct: 155 ITSLWPTIINTALGVSSVNSDYLDVAKVLEMPRWRQIYKIILPASLPYIFTGLRISLGIA 214

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           W   +  E+ + G       G+G ++ +   + +   V L VL++    L L+  L    
Sbjct: 215 WLVIVAVEMLTGG------LGIGFFVWDEWNRLNLNSVFLAVLVIGLTGLLLDYILGQIQ 268

Query: 578 YLYGTRCLRL 587
            L   R  +L
Sbjct: 269 VLVTHRKAKL 278



 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 23/265 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------ 58
              P  I  ++   +   L  +++  I+ +L   +   T P  +V  +    +       
Sbjct: 17  TTKPLIIKDQVLLPLAGFLGVLILWWIVALLNPDLM-PTPPEALVANLDYIFNPFYVRGP 75

Query: 59  --HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               +      +  R+L   V+S +       L   S+     L P++ I + +  L +L
Sbjct: 76  GNLGIGWLLIASLRRVLIGFVLSAMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWL 135

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             ++  F    P        +AIF IF + +W    +    + ++  D  +V++   +  
Sbjct: 136 PISLAIFNQADP--------SAIFVIFITSLWPTIINTALGVSSVNSDYLDVAKVLEMPR 187

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W++ + + +P S+P +   + +S+   W  +VA EM+  G       GIG ++       
Sbjct: 188 WRQIYKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGIGFFVWDEWNRL 241

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +L ++  A+L +     L D +L +
Sbjct: 242 NLNSVFLAVLVIGLTGLLLDYILGQ 266


>gi|91774682|ref|YP_544438.1| nitrate transport permease [Methylobacillus flagellatus KT]
 gi|91708669|gb|ABE48597.1| nitrate transport permease [Methylobacillus flagellatus KT]
          Length = 295

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 87/219 (39%), Gaps = 13/219 (5%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   + +   Y    +   + W    ++ RV +   +A+++ IP+G  IG    I
Sbjct: 77  ASTWHAATALFSDPFYVNDPNDQGIGWNILASLQRVALGFGLAALVGIPLGFVIGRFQFI 136

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S    P   +L       + P+ +          +     ++     W ++ N   G S 
Sbjct: 137 SRMAAPVIGILRPVSPLAWLPIGLLVFKAA----DPAAIWVIFISAIWPMIINTAVGVSK 192

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA   +++ W+    I+ P + PY +TG   + G AW   + +E+ + G    
Sbjct: 193 VPQDYMNVARVLNLSEWKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG---- 248

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G+G ++ +     +   +++ + ++    L L   L
Sbjct: 249 --VGIGFWVWDEWNNLNVEHIIIAIFVVGIVGLLLEVAL 285



 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 18/217 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       +  + + +  +  P++ I++ +  L +L
Sbjct: 97  NDQGIGWNILASLQRVALGFGLAALVGIPLGFVIGRFQFISRMAAPVIGILRPVSPLAWL 156

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        AAI+ IF S +W M  +    +  +P+D   V+R   LS 
Sbjct: 157 PIGLLVFKAADP--------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVARVLNLSE 208

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+    +  PF +P ++  + +S+   W  +VA+EM+  G       GIG ++       
Sbjct: 209 WKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 262

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           ++  I+ A+  +  V  L +      +   + +F  E
Sbjct: 263 NVEHIIIAIFVVGIVGLLLEVA----LTSIAQRFSYE 295


>gi|251790233|ref|YP_003004954.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247538854|gb|ACT07475.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 528

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/563 (13%), Positives = 172/563 (30%), Gaps = 73/563 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  + V  +        ++       V           L      +  R+   +   +  
Sbjct: 33  LLLMCVWWLAGHYDWMSEQILPSPATVADSARDFIPQELAPQLWVSLARLAIGLTGGIAL 92

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L   SR L  + +P+ +++  IP L ++   ++             E   +  +
Sbjct: 93  GMTLGVLFGLSRTLDRLGMPLFNVLAQIPTLAWIPLLMLALGIG--------EALKLVVL 144

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +T      +   P+ L E++R+ RL    +   L +P  +P ++    ++ S 
Sbjct: 145 IKAVTVPVTLCTCAGIRQTPQTLYEMARTLRLPRLTRLRRLVIPAMLPYVMTGTRLAFSQ 204

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           GW  ++A E++   +      G+G  +  + +   L  +L  +L +       +Q+L R 
Sbjct: 205 GWVSLIAVELLASSE------GLGYLMVQSRQLFMLDLVLVCILAIGAFGLAGEQMLQR- 257

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322
                                    L R+  F      S+ N   P + +         +
Sbjct: 258 -------------------------LERRWIFWPAPVLSNENPTPPAAWHALAGWILPAL 292

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +   +     Q   +             ++ G++ G    ++                  
Sbjct: 293 LCLLWQLATHQQWVHAAFLPTPREVATTLLAGLSNGELTSAL------------------ 334

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R +    + + +   +G  +G        + P    L +     + PL+ +   
Sbjct: 335 -AASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLTPLLSALRSVALFAWLPLLTAWFG 393

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      + +     +  L     G    P    E A    +   +  R++ LP +
Sbjct: 394 LE----ESVKVVFIALAAFFPTLLASYQGVRHLPPSLLETARVLRLNARQRLRWLTLPAV 449

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   +G   +   AW  +I +E            G+G+ +  + +      V+ GV+++
Sbjct: 450 LPALFSGIRLSLMHAWVGTIGAEYF-----IASGNGIGSMMIRAQQLFQSERVIAGVVLI 504

Query: 563 CCFVLALNRFLWHPLYLYGTRCL 585
                   R +         R L
Sbjct: 505 ALVSTLFYRLI-----TLAERRL 522



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              PR++   +   L    L    + +  R L+   +      +   L  +SR    +L 
Sbjct: 311 LPTPREVATTLLAGLSNGELTSALAASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLT 370

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L  ++S+ +  +L     +F      KV+   LAA F            + YQ + ++
Sbjct: 371 PLLSALRSVALFAWLPLLTAWFGLEESVKVVFIALAAFF--------PTLLASYQGVRHL 422

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E +R  RL+  Q+  +L +P  +P L   + +S+   W   + +E  +       
Sbjct: 423 PPSLLETARVLRLNARQRLRWLTLPAVLPALFSGIRLSLMHAWVGTIGAEYFIASGN--- 479

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             GIGS +  A +      ++  ++ +  V  L+ +L+    R +  W
Sbjct: 480 --GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLITLAERRLTAW 525


>gi|284054400|ref|ZP_06384610.1| nitrate ABC transporter, inner membrane subunit [Arthrospira
           platensis str. Paraca]
          Length = 291

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63
            +++ P+   +L F++V  +   +        + R + +   + +D           L  
Sbjct: 40  GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 98

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++++       L   +  +   L PI  I+++IP L +L  ++  F
Sbjct: 99  QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 158

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        +AIF IF + +W +  +  + +  IP+D   VSR  RL     F+ +
Sbjct: 159 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 210

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P +   + + +   W  ++A+EM++ G       GIG +I  A     +  I+ 
Sbjct: 211 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 264

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  V  L D+ +
Sbjct: 265 AVIYVGVVGLLLDKFI 280



 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A ++ + +G+ IG    +   + P  Q+L   P   + P+ +
Sbjct: 96  LFWQILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISL 155

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         N     ++     W I+ N   G    P D+  V+    +    ++  I+
Sbjct: 156 AGFERA----NPSAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKIL 211

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A I +E+   G       G+G +I ++       +++L 
Sbjct: 212 FPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILA 265

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L++F+
Sbjct: 266 VIYVGVVGLLLDKFI 280


>gi|146311970|ref|YP_001177044.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp.
           638]
 gi|145318846|gb|ABP60993.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp.
           638]
          Length = 293

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV +   +A+I+ IP+G  IG     S    P   LL       +
Sbjct: 92  PNDMGIGWNILASLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAW 151

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 261

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++ ++I+    L L + L
Sbjct: 262 NILIAIVIIGVVGLLLEQGL 281



 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ +       L  +      +  P++ +++ +  L +L   
Sbjct: 96  GIGWNILASLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLPIG 155

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++ 
Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVE 261

Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            IL A++ +  V  L +Q   L+ R    W  K
Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 293


>gi|327393668|dbj|BAK11090.1| nitrate transport permease protein NrtB [Pantoea ananatis AJ13355]
          Length = 312

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 13/244 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---Q 374
           R    +R         LC    +  +  I              W +   +     Y    
Sbjct: 53  RPPARLRPLLQRCIPALCGVLLLLLVWQIAALYSQGFPGPYATWAAAKVLFADPFYNNGP 112

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   + W    ++ RV +   +A+++ IP G  +G    ++    P   LL       + 
Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ +          +      +   + W ++ N   G    P D+  VA    ++ W   
Sbjct: 173 PIGLLLFQRAEPASSWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIM 228

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +   
Sbjct: 229 RRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVEN 282

Query: 555 VVLG 558
           +++ 
Sbjct: 283 ILIA 286



 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 14/188 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       L  +   +  +  PI+ +++ +  L +L
Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS 
Sbjct: 173 PIGLLLFQRAEP--------ASSWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 224

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W     +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 225 WTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNL 278

Query: 237 DLLAILYA 244
           ++  IL A
Sbjct: 279 NVENILIA 286


>gi|237731765|ref|ZP_04562246.1| nitrate ABC transporter [Citrobacter sp. 30_2]
 gi|226907304|gb|EEH93222.1| nitrate ABC transporter [Citrobacter sp. 30_2]
          Length = 291

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 23/267 (8%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--- 373
             T+ V +   P +       +R    L      VVC     I  +     ++       
Sbjct: 20  LSTMKVRKRKMPWSMWLSTWLRRAVPALLGIALLVVCWQLAAINSKGFPTPLSTLDSALT 79

Query: 374 ----------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
                      + + + W    ++ RV +   +A+++ IP+G  IG     S    P   
Sbjct: 80  LFADPFYNGGPNDMGIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIA 139

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           LL       + P+ +          +      +   + W ++ N   G    P+D+  VA
Sbjct: 140 LLRPVSPLAWLPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPDDYLNVA 195

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++ W   R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I
Sbjct: 196 RVLQLSEWTVMRRILFPAVLPAILTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWI 249

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
                  +   +++ ++I+    L L 
Sbjct: 250 WNEWNNLNVENILIAIVIIGVVGLLLE 276



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 20/253 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66
           RR  P +  +   V+   +  I   G        D    +          +   +     
Sbjct: 41  RRAVPALLGIALLVVCWQLAAINSKGFPTPLSTLDSALTLFADPFYNGGPNDMGIGWNVL 100

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       L  +      +  P++ +++ +  L +L   ++ F   
Sbjct: 101 ASLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIALLRPVSPLAWLPIGLLLFQKA 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP D   V+R  +LS W     +  P
Sbjct: 161 EP--------ASSWTIFICSIWPMVINTAEGVRRIPDDYLNVARVLQLSEWTVMRRILFP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A++
Sbjct: 213 AVLPAILTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 266

Query: 247 TMLGVIFLYDQLL 259
            +  V  L +Q L
Sbjct: 267 IIGVVGLLLEQGL 279


>gi|299529543|ref|ZP_07042980.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
 gi|298722406|gb|EFI63326.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni S44]
          Length = 330

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGL 191

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 302 IFVIGIVGLVLE 313



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 18/213 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGLLV 193

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            A+  +  V  + +      M+  ++ F  E  
Sbjct: 300 IAIFVIGIVGLVLEWA----MVKLASAFTFEEV 328


>gi|325285649|ref|YP_004261439.1| ABC-type transporter, integral membrane subunit [Cellulophaga
           lytica DSM 7489]
 gi|324321103|gb|ADY28568.1| ABC-type transporter, integral membrane subunit [Cellulophaga
           lytica DSM 7489]
          Length = 366

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 14/209 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y      I +   ++  V    ++A II +P+G+ IG  P + S    F Q+       V
Sbjct: 149 YTGRASFIDIVLTSIKTVFAGFLLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVV 208

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIF-----GTQWYILFNVIAGASAFPNDFKEVASSFH 487
           ++ LV   V   ++  +   + ++ F        W  L N   G S+   D+  VA    
Sbjct: 209 WYLLVFMIVKTLYIGASSDNAFVISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLK 268

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +  ++    +ILP   P   TG       AW   I  E+ +      ++ GLG ++ E  
Sbjct: 269 LGTFQKVFKVILPSSLPLIFTGLRITLSVAWMVLIAIELLA------QSPGLGLFVWEEF 322

Query: 548 EKGSFP---EVVLGVLIMCCFVLALNRFL 573
           + G+     ++++ + ++      L+R +
Sbjct: 323 QNGANDSNAKIIVAMFVIGIIGFLLDRLM 351



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 80/193 (41%), Gaps = 10/193 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG-K 130
           + +  +++L+       +   S  L       + I + +  + +     +    LY G  
Sbjct: 166 VFAGFLLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVVWYLLVFMIVKTLYIGAS 225

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A + +  ++    +W    +    + ++ +D   V++  +L  +QK + + +P S+P
Sbjct: 226 SDNAFVISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLKLGTFQKVFKVILPSSLP 285

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAMLT 247
            +   + +++S  W  ++A E++         PG+G ++    +         I+ AM  
Sbjct: 286 LIFTGLRITLSVAWMVLIAIELLA------QSPGLGLFVWEEFQNGANDSNAKIIVAMFV 339

Query: 248 MLGVIFLYDQLLF 260
           +  + FL D+L+ 
Sbjct: 340 IGIIGFLLDRLML 352


>gi|91789128|ref|YP_550080.1| nitrate transport permease [Polaromonas sp. JS666]
 gi|91698353|gb|ABE45182.1| nitrate transport permease [Polaromonas sp. JS666]
          Length = 328

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+I+ IPVG  IG    +S    P   LL       + P+ +
Sbjct: 130 VGWNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLPIGL 189

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 190 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSKIL 245

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 246 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 299

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 300 IFVIGIVGLVLE 311



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ +       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 132 WNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLPIGLLV 191

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 192 FKGANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSK 243

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 244 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 297

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A+  +  V  + +  L +    ++
Sbjct: 298 IAIFVIGIVGLVLEFALIKLATAFT 322


>gi|319794681|ref|YP_004156321.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus EPS]
 gi|315597144|gb|ADU38210.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus EPS]
          Length = 312

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 18/257 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTY--- 373
                    ++++        +L + W  V      G       WQ    + +   Y   
Sbjct: 49  RTPIDLRAFWMRVLPPLAGFGLLLLIWELVAMKSTTGFPTPLATWQQALTVFSDPFYSKG 108

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   V W    ++ RV +   +A+++ IP G  IG    ++    P   L+       +
Sbjct: 109 PNDQGVGWNVLSSLQRVALGFGLAALVGIPAGFAIGRFEFLARMFNPLISLMRPVSPLAW 168

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          N      +   + W ++ N   G    P+D+  VA   +++ W+ 
Sbjct: 169 LPIGLLVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKI 224

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I+ P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +  
Sbjct: 225 LTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVA 278

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ + ++    L L 
Sbjct: 279 NIIIAIFVIGIVGLVLE 295



 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 99/272 (36%), Gaps = 27/272 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           R+ P +      +L+  ++ +       T +       + +  D           +    
Sbjct: 60  RVLPPLAGFGLLLLIWELVAMKSTTGFPTPLA-TWQQALTVFSDPFYSKGPNDQGVGWNV 118

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++ L          +   L  +  P++ +M+ +  L +L   ++ F  
Sbjct: 119 LSSLQRVALGFGLAALVGIPAGFAIGRFEFLARMFNPLISLMRPVSPLAWLPIGLLVFKG 178

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAI+ IF   +W M  +    +  +P D   V++   LS W+    +  
Sbjct: 179 ANP--------AAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKILTKILF 230

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+ A+
Sbjct: 231 PAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVANIIIAI 284

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             +  V  + +      +I  +  F  E    
Sbjct: 285 FVIGIVGLVLEFA----LIKLATAFTFEEVKS 312


>gi|322833097|ref|YP_004213124.1| nitrate ABC transporter inner membrane subunit [Rahnella sp. Y9602]
 gi|321168298|gb|ADW73997.1| nitrate ABC transporter, inner membrane subunit [Rahnella sp.
           Y9602]
          Length = 304

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 13/264 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L R   V+     +    L     V  +  I              W++   I  
Sbjct: 36  AAKTAYLARLRVVMHRVLQKAIPALLGAIVVIALWQIAALSSKGFPTPLKTWEAAKVIFA 95

Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
              Y    + + + W    ++ RV +   +A++I IP G  IG    I+S + P   LL 
Sbjct: 96  DPFYIAGPNDMGIGWNVLASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLR 155

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + P+ +                 +   + W ++ N   G    P D+  VA   
Sbjct: 156 PVSPLAWLPIGLLLFQRAEPASAWT----IFICSIWPMILNTAEGVMRIPQDYLNVARVL 211

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++ +   R I+ P + PY +TG   + G AW   + +E+ + G       G+G +I   
Sbjct: 212 KLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNE 265

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
               +   +++ +L++    + L 
Sbjct: 266 WNNLNVENIIIAILLIGVVGMVLE 289



 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 104/268 (38%), Gaps = 24/268 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66
           ++  P +   +  + +  I  +   G        +   ++          +   +     
Sbjct: 54  QKAIPALLGAIVVIALWQIAALSSKGFPTPLKTWEAAKVIFADPFYIAGPNDMGIGWNVL 113

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       L  +   +  +L PI+ +++ +  L +L   ++ F   
Sbjct: 114 ASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLRPVSPLAWLPIGLLLFQRA 173

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS +     +  P
Sbjct: 174 EP--------ASAWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILFP 225

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  I+ A+L
Sbjct: 226 AVLPYILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVENIIIAIL 279

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            +  V  + +Q     ++  + +F  + 
Sbjct: 280 LIGVVGMVLEQ----GLMAIARRFSYDN 303


>gi|120610821|ref|YP_970499.1| nitrate ABC transporter inner membrane subunit [Acidovorax citrulli
           AAC00-1]
 gi|120589285|gb|ABM32725.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           citrulli AAC00-1]
          Length = 315

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 18/255 (7%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTY---QDVLY 378
               +L +        +L + W  V       I      W+    I +   Y    +   
Sbjct: 57  LRRFWLAVLPPACGIGLLLVVWAIVSTTTGGSIPNPSDTWKQAVEIFSDPFYRNGPNDQG 116

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 117 VGWNVLASLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGL 176

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 177 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 232

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 233 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNILIA 286

Query: 559 VLIMCCFVLALNRFL 573
           + ++    L L   L
Sbjct: 287 IFVIGIVGLLLEYAL 301



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74
           +  +LV+  I     G             V I  D           +      +  R+  
Sbjct: 71  IGLLLVVWAIVSTTTGGSIPNPSDTWKQAVEIFSDPFYRNGPNDQGVGWNVLASLERVAV 130

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              ++ +       +  +   L  +  P++ +++ +  L +L   ++ F    P      
Sbjct: 131 GFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANP------ 184

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    +  P  +P ++ 
Sbjct: 185 --AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPYMLT 242

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++   W  +VA+EM+  G       GIG ++       ++  IL A+  +  V  L
Sbjct: 243 GVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNILIAIFVIGIVGLL 296

Query: 255 YDQLLFRPMIVWS 267
            +  L +    +S
Sbjct: 297 LEYALVKLATAFS 309


>gi|264676723|ref|YP_003276629.1| nitrate ABC transporter inner membrane subunit [Comamonas
           testosteroni CNB-2]
 gi|262207235|gb|ACY31333.1| nitrate ABC transporter, inner membrane subunit [Comamonas
           testosteroni CNB-2]
          Length = 330

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGL 191

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 302 IFVIGIVGLVLE 313



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 18/213 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGLLV 193

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            A+  +  V  + +      ++  ++ F  E  
Sbjct: 300 IAIFVIGIVGLVLEWA----LVKLASAFTFEEV 328


>gi|114321735|ref|YP_743418.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228129|gb|ABI57928.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 279

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    +A ++ IP+G  +G  P +   + P+ Q+L       + PL +  +    
Sbjct: 91  SIGRVLAGYGLAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPLALYIIQ--- 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       ++   + W IL N   G +    D   VA +  ++  +    +ILP   P 
Sbjct: 148 -DSVQSAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPT 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G +W   + +E+   G      TG+G ++           V+  VL++   
Sbjct: 207 ILTGMRIAIGISWLVIVAAEMLVGG------TGVGYFVWNQWNNLDLTSVIFAVLMIGIV 260

Query: 566 VLALNRFL 573
            + L+  L
Sbjct: 261 GMILDSML 268



 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 90/195 (46%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+L+   +++L       +   S  +   L P + +++ I  L ++   +    
Sbjct: 88  LAHSIGRVLAGYGLAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPLALYIIQ 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +           +AIF IF   VW +  +    +  + +DL  V+R+ +LS  +  + + 
Sbjct: 148 DSV--------QSAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVI 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +++   W  +VA+EM+V G       G+G ++       DL ++++A
Sbjct: 200 LPAAAPTILTGMRIAIGISWLVIVAAEMLVGGT------GVGYFVWNQWNNLDLTSVIFA 253

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  V  + D +L
Sbjct: 254 VLMIGIVGMILDSML 268


>gi|188533859|ref|YP_001907656.1| Nitrate transporter permease component [Erwinia tasmaniensis
           Et1/99]
 gi|188028901|emb|CAO96767.1| Nitrate transporter permease component [Erwinia tasmaniensis
           Et1/99]
          Length = 287

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV     +A+++ IP G  IG    I++   P   LL       +
Sbjct: 86  PNDMGIGWNLLASLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAW 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +                 +   + W ++ N   G    P D+  VA   +++ +  
Sbjct: 146 LPIGLLLFQRAEPASAWT----IFICSIWPMILNTAEGVKRIPQDYLNVARVLNLSEFTV 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + PY +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 202 MRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 255

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ ++++    + L 
Sbjct: 256 NIIIAIVLIGVVGMVLE 272



 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 24/279 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----- 56
           FL   L   I +RI P I  L+  + +  I  +   G            ++         
Sbjct: 26  FLNRQLIRRIGQRIIPAILGLVVLLAIWQIAALSSKGFPTPLKSLAAAKVIFADPFYIAG 85

Query: 57  -DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +      +  R+ +   ++ +       L  +   +  +  PI+ +++ +  L +
Sbjct: 86  PNDMGIGWNLLASLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAW 145

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R   LS
Sbjct: 146 LPIGLLLFQRAEP--------ASAWTIFICSIWPMILNTAEGVKRIPQDYLNVARVLNLS 197

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I      
Sbjct: 198 EFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 251

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            ++  I+ A++ +  V  + +Q     ++  + +F  + 
Sbjct: 252 LNVENIIIAIVLIGVVGMVLEQ----GLMAIARRFSYDN 286


>gi|78485498|ref|YP_391423.1| binding-protein dependent transport system inner membrane protein
           [Thiomicrospira crunogena XCL-2]
 gi|78363784|gb|ABB41749.1| ATP-binding cassette (ABC) superfamily nitrate transporter,
           permease component [Thiomicrospira crunogena XCL-2]
          Length = 332

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 16/217 (7%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           GY+     Y            ++  V+   I+ASII IP+GI IG   +  + + P  Q+
Sbjct: 104 GYVPTIRDYTGPPTFFEQIGRSLVTVMSGFILASIIAIPIGIVIGLSANAYAAVNPLIQI 163

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPN 477
                   + PLV   VS  ++  +             ++    W  + N  AG +    
Sbjct: 164 FKPVSPLAWLPLVTMVVSAVYVTDDPAFDKAFLNSMFTVLLCCLWPTIINTAAGVATVTQ 223

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D K V+    ++ W   R I+LP   P   TG   + G AW   I +E+ +      +  
Sbjct: 224 DLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTGLRISLGIAWMVLIAAEMLA------QNP 277

Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNR 571
           GLG ++ +  + G   S   +++ V+++      L+R
Sbjct: 278 GLGKFVWDEFQNGSSNSLGRIMVAVIMIGIVGFILDR 314



 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 14/212 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +   R+ + ++S  +++ +       +   S      + P++ I + +  L +L    + 
Sbjct: 120 EQIGRSLVTVMSGFILASIIAIPIGIVIGLSANAYAAVNPLIQIFKPVSPLAWLPLVTMV 179

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              +Y         A L ++F +    +W    +    +  + +DL+ VS+  RLS W  
Sbjct: 180 VSAVYVTDDPAFDKAFLNSMFTVLLCCLWPTIINTAAGVATVTQDLKNVSQVLRLSWWTH 239

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ--- 236
              + +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +     
Sbjct: 240 VRKIVLPCSIPMMFTGLRISLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSN 293

Query: 237 DLLAILYAMLTMLGVIFLYDQ--LLFRPMIVW 266
            L  I+ A++ +  V F+ D+  L+ +  + W
Sbjct: 294 SLGRIMVAVIMIGIVGFILDRGMLVLQKAVSW 325


>gi|296271945|ref|YP_003654576.1| nitrate ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096120|gb|ADG92070.1| nitrate ABC transporter, inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
          Length = 269

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T QD   + W    ++ RV    I+A II +PVG+ IG   +    ++PF Q+      
Sbjct: 64  ITNQDDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSP 123

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL++        + N      +   + W I+ N   G  +   D+  VA     T 
Sbjct: 124 LAWLPLLLFVFQ----DINATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTP 179

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R IILP   PY  TG   + G AW   + +E+ + G       G+G +I +     
Sbjct: 180 LEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNL 233

Query: 551 SF 552
           ++
Sbjct: 234 NY 235



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   +      +  R+ S  +++++           S+   + L P + I + +  L +L
Sbjct: 68  DDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSPLAWL 127

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F +            AI  IF + +W +  +    + ++  D   V++  + + 
Sbjct: 128 PLLLFVFQD--------INATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTP 179

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +K   + +P ++P +   M +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 180 LEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 233

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +   I+  ++ +  V F+ D ++ +
Sbjct: 234 NYFNIIIGIIIVGLVGFMLDIIMGK 258


>gi|149199053|ref|ZP_01876093.1| possible nitrate transport system permease protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137842|gb|EDM26255.1| possible nitrate transport system permease protein [Lentisphaera
           araneosa HTCC2155]
          Length = 275

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ RV++    A+ I IP+G  +G    +   + PF Q+L       + PL +
Sbjct: 80  IGIQLFYSLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLAL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       ++   + W +L N   G +    D+ +VA +  ++  +    +I
Sbjct: 140 FVIK----DSEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVI 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   + G AW   + +E+   G      TG+G Y+           V+  
Sbjct: 196 LPASAPTIFTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLNSVIFS 249

Query: 559 VLIMCCFVLALNRFL 573
           ++++    + L+  L
Sbjct: 250 IIMIGLVGMTLDLIL 264



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+L     +         +   S  +   L P + I++ I  L ++   +    
Sbjct: 84  LFYSLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLALFVIK 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        +E +AIF IF   +W M  +    + N+ +D  +V+++  LS  +  + + 
Sbjct: 144 D--------SEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVI 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S P +   M +S+   W  +VA+EM+V G       GIG Y+       DL +++++
Sbjct: 196 LPASAPTIFTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFS 249

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  V    D +L
Sbjct: 250 IIMIGLVGMTLDLIL 264


>gi|162452310|ref|YP_001614677.1| nitrate/nitrite ABC transporter membrane protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162892|emb|CAN94197.1| nitrate/nitrite ABC transporter membrane protein [Sorangium
           cellulosum 'So ce 56']
          Length = 265

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 15/209 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV     +A ++  P+G ++G      S   P  Q+L       + PL +
Sbjct: 69  ILRFTWYSLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAWLPLGL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                    P+      +   + W  + N   G  + P D+  VA    ++  +    + 
Sbjct: 129 VLFQ----KPDPAGVFTIAMCSMWPTVLNTALGVRSIPQDYMNVARVLRLSRMKTLFKVQ 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   + G AW   +  E+ +       + G+G ++ +      +  ++L 
Sbjct: 185 LPAALPYMFTGFRLSLGIAWLVIVAVEMLTG------SPGVGGFLWQEYNSLIYEHIILC 238

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++ +      L+  +         R L+L
Sbjct: 239 IITIGVVGFLLDALM-----SLVERRLKL 262



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + ++   +  R+     +++L           SR       PI+ I++ +  L +L  
Sbjct: 67  QGILRFTWYSLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAWLPL 126

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F    P        A +F I    +W    +    + +IP+D   V+R  RLS  +
Sbjct: 127 GLVLFQKPDP--------AGVFTIAMCSMWPTVLNTALGVRSIPQDYMNVARVLRLSRMK 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P ++P +     +S+   W  +VA EM+         PG+G ++         
Sbjct: 179 TLFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLTGS------PGVGGFLWQEYNSLIY 232

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  ++T+  V FL D L+
Sbjct: 233 EHIILCIITIGVVGFLLDALM 253


>gi|156933689|ref|YP_001437605.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531943|gb|ABU76769.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V   +A+++ IP+G  IG    +     P   LL       + P+ +
Sbjct: 97  IGWNVLASLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGL 156

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +      +   + W ++ N   G    P D+  VA    ++ W   R I+
Sbjct: 157 LLFQKAEPASSWT----IFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRIL 212

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + P  +TG   + G AW   + +E+ + G       G+G +I       +   +++ 
Sbjct: 213 FPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVENILIA 266

Query: 559 VLIMCCFVLALN 570
           ++I+    L L 
Sbjct: 267 IVIIGVVGLLLE 278



 Score =  146 bits (370), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 24/265 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASR 67
           R+ P I  L   V+   I  +   G        D    +          +   +      
Sbjct: 44  RVVPAILGLALLVIAWQIAAVSSKGFPTPLSTLDSALTLFADPFYNDGPNDQGIGWNVLA 103

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     ++ L       L  +   LG +  P++ +++ +  L +L   ++ F    
Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGLLLFQKAE 163

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        A+ + IF   +W M  +  + +  IP D   V+R  +LS W     +  P 
Sbjct: 164 P--------ASSWTIFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRILFPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A++ 
Sbjct: 216 VLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVI 269

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269
           +  V  L +Q   L+ R    W +K
Sbjct: 270 IGVVGLLLEQGLMLIARRF-SWQDK 293


>gi|239816496|ref|YP_002945406.1| nitrate ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803073|gb|ACS20140.1| nitrate ABC transporter, inner membrane subunit [Variovorax
           paradoxus S110]
          Length = 309

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 18/258 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTY-- 373
                     ++++        +L + W  V      G       WQ    + +   Y  
Sbjct: 45  PRTPIDLRAFWMRVLPPLAGFGLLVLIWELVAMKSTTGFPSPLATWQQALTVFSDPFYSK 104

Query: 374 -QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   V W    ++ RV +   +A+ + IP G  IG    +S    P   LL       
Sbjct: 105 GPNDQGVGWNVLSSLQRVALGFGLAAAVGIPAGFAIGRFEFLSRMFNPLISLLRPVSPLA 164

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+ +          N      +   + W ++ N   G    P+D+  VA   +++ W+
Sbjct: 165 WLPIGLLVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWK 220

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  I+ P + PY +TG   A G AW   + +E+ + G       G+G ++ +     + 
Sbjct: 221 IFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNV 274

Query: 553 PEVVLGVLIMCCFVLALN 570
             +++ + ++    L L 
Sbjct: 275 ANIIIAIFVIGIVGLVLE 292



 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 99/272 (36%), Gaps = 27/272 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           R+ P +      VL+  ++ +       + +       + +  D           +    
Sbjct: 57  RVLPPLAGFGLLVLIWELVAMKSTTGFPSPLA-TWQQALTVFSDPFYSKGPNDQGVGWNV 115

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++            +   L  +  P++ +++ +  L +L   ++ F  
Sbjct: 116 LSSLQRVALGFGLAAAVGIPAGFAIGRFEFLSRMFNPLISLLRPVSPLAWLPIGLLVFKG 175

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAI+ IF   +W M  +    +  +P D   V++   LS W+ F  +  
Sbjct: 176 ANP--------AAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKIFTKILF 227

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+ A+
Sbjct: 228 PAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVANIIIAI 281

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             +  V  + +      +I  +  F  E    
Sbjct: 282 FVIGIVGLVLEFA----LIKLATAFTFEEVKS 309


>gi|158422385|ref|YP_001523677.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329274|dbj|BAF86759.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 284

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  +          D    I L   ++ RV+    +A  + IP+G  IG  P +S  + 
Sbjct: 71  LWTLLSNPFYDKGPNDKGLGIQL-AFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALD 129

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF Q+L       + PL +  +     + ++    ++   + W +L N   G ++   ++
Sbjct: 130 PFIQVLKPISPLAWMPLALYTIK----DSSISAVFVIFICSVWPMLINTAFGVASVRKEW 185

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +  +   +    +ILP   P  +TG   + G AW   + +E+   G      TG+
Sbjct: 186 LNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGI 239

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++       S   V++ +L++    + L++ L
Sbjct: 240 GYFVWNEWNNLSITNVIIAILVIGVVGMVLDQIL 273



 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 89/203 (43%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L    + +  R+L    +++        +   S  +   L P + +++ I  L ++
Sbjct: 85  NDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWM 144

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          +  + ++A+F IF   VW M  +    + ++ ++   V+R+  +  
Sbjct: 145 PLALY--------TIKDSSISAVFVIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGP 196

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ + + +P + P ++  M +S+   W  +VA+EM+V G       GIG ++       
Sbjct: 197 LKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 250

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  ++ A+L +  V  + DQ+L
Sbjct: 251 SITNVIIAILVIGVVGMVLDQIL 273


>gi|326317800|ref|YP_004235472.1| nitrate ABC transporter inner membrane subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374636|gb|ADX46905.1| nitrate ABC transporter, inner membrane subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 315

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 18/255 (7%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTY---QDVLY 378
               +L +        +L + W  V       I      W+    I +   Y    +   
Sbjct: 57  LRRFWLAVLPPACGIGLLLVVWAIVSTTTGGSIPNPADTWKQAVEIFSDPFYRNGPNDQG 116

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 117 VGWNVLASLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGL 176

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 177 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 232

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 233 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNILIA 286

Query: 559 VLIMCCFVLALNRFL 573
           + ++    L L   L
Sbjct: 287 IFVIGIVGLLLEYAL 301



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74
           +  +LV+  I     G             V I  D           +      +  R+  
Sbjct: 71  IGLLLVVWAIVSTTTGGSIPNPADTWKQAVEIFSDPFYRNGPNDQGVGWNVLASLERVAV 130

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              ++ +       +  +   L  +  P++ +++ +  L +L   ++ F    P      
Sbjct: 131 GFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANP------ 184

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    +  P  +P ++ 
Sbjct: 185 --AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPYMLT 242

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++   W  +VA+EM+  G       GIG ++       ++  IL A+  +  V  L
Sbjct: 243 GVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNILIAIFVIGIVGLL 296

Query: 255 YDQLLFRPMIVWS 267
            +  L +    +S
Sbjct: 297 LEYALVKLATAFS 309


>gi|283785488|ref|YP_003365353.1| nitrate transporter permease component [Citrobacter rodentium
           ICC168]
 gi|282948942|emb|CBG88545.1| nitrate transporter permease component [Citrobacter rodentium
           ICC168]
          Length = 291

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV     +A+++ IP+G   G     S    P   LL       +
Sbjct: 90  PNDMGIGWNVLASLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAW 149

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 150 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTV 205

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 206 MRRILFPAVLPAILTGIRLSVGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 259

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            +++ ++I+    L L + L     +   R  
Sbjct: 260 NILIAIVIIGVVGLLLEQGL-----MLAARRF 286



 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 20/253 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66
           +R  P    +   VL   +  I   G        D    +          +   +     
Sbjct: 41  QRAVPAALGMGLLVLCWQLAAINSKGFPTPLSTLDSALTLFADPFYNGGPNDMGIGWNVL 100

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+ +   ++ L       L  +      +  P++ +++ +  L +L   ++ F   
Sbjct: 101 ASLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAWLPIGLLLFQKA 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP D   V+R  +LS W     +  P
Sbjct: 161 EP--------ASSWTIFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTVMRRILFP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A++
Sbjct: 213 AVLPAILTGIRLSVGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 266

Query: 247 TMLGVIFLYDQLL 259
            +  V  L +Q L
Sbjct: 267 IIGVVGLLLEQGL 279


>gi|313682504|ref|YP_004060242.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155364|gb|ADR34042.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum
           kujiense DSM 16994]
          Length = 263

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   + W    ++ RV     +A ++ +P+G+ IG   +    + PF Q+L       +
Sbjct: 59  EDDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAW 118

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++        + NL     +   + W I+ N   G  +   D+  VA    +T +  
Sbjct: 119 LPLLLFVFK----DINLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTPFEK 174

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              IILP   P+  TG   + G AW   + +E+ + G       G+G +I +     ++ 
Sbjct: 175 VFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNLNYH 228

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G+ I+    L L+  +
Sbjct: 229 SIIIGIAIVGVIGLILDAIM 248



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 86/203 (42%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   +      +  R+     +++L       L   S+   + L P + I++ +  L +L
Sbjct: 60  DDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAWL 119

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F +          L AI  IF + +W +  +    + ++  D   V++  +L+ 
Sbjct: 120 PLLLFVFKD--------INLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTP 171

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           ++K + + +P ++P +   M +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 172 FEKVFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 225

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           +  +I+  +  +  +  + D ++
Sbjct: 226 NYHSIIIGIAIVGVIGLILDAIM 248


>gi|260223152|emb|CBA33430.1| Nitrate transport permease protein nrtB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 312

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 18/272 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSI 364
           + + K   +      + +    L++        +L   W  V  G A  I      W+  
Sbjct: 37  AQSAKPAWQEQATPGYDWSGLLLKVLPPLFGLALLIGIWAMVSIGTASSIPSPLETWKQA 96

Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             I +   Y    +   V W    ++ RV +   +A+++ IPVG  IG    +S    P 
Sbjct: 97  VVIFSDPFYSKGPNDQGVGWNILYSLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPL 156

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             LL       + P+ +          N      +   + W ++ N   G    P D+  
Sbjct: 157 ISLLRPVSPLAWLPIGLLVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMN 212

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA   +++ W+    I+ P + PY +TG   A G AW   + +E+ + G       G+G 
Sbjct: 213 VARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGF 266

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +     +   +++ + ++    L L   L
Sbjct: 267 WVWDEWNNLNVKNIIIAIFVIGIVGLLLEYAL 298



 Score =  140 bits (354), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 102/272 (37%), Gaps = 27/272 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           ++ P +F L   + +  +++ +       +        V I  D           +    
Sbjct: 60  KVLPPLFGLALLIGIWAMVS-IGTASSIPSPLETWKQAVVIFSDPFYSKGPNDQGVGWNI 118

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++ +       +  +   L  +  P++ +++ +  L +L   ++ F  
Sbjct: 119 LYSLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPLISLLRPVSPLAWLPIGLLVFKG 178

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    +  
Sbjct: 179 ANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILF 230

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+ A+
Sbjct: 231 PSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNIIIAI 284

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
             +  V  L +      +I  +  F  E    
Sbjct: 285 FVIGIVGLLLEYA----LIKLATAFTFEEVKS 312


>gi|307292771|ref|ZP_07572617.1| nitrate ABC transporter, inner membrane subunit [Sphingobium
           chlorophenolicum L-1]
 gi|306880837|gb|EFN12053.1| nitrate ABC transporter, inner membrane subunit [Sphingobium
           chlorophenolicum L-1]
          Length = 318

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 12/215 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           ++ +   + HF+ QD   V   G    ++ RV++   IA++I + +GI IG        +
Sbjct: 103 FKGVDIGLTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRAL 162

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  Q+L   P   + P+ ++       +       L+     W ++ N  AG    P  
Sbjct: 163 DPLFQVLRTVPPLAWLPISLAIFQQAQPS----AIFLIFITAIWPVILNTAAGVQTIPAA 218

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           ++ VA    +    ++  I+LP   P+  TG     G +W A + +E+   G      TG
Sbjct: 219 YRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TG 272

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G +I +S       + ++ ++ +     AL+R +
Sbjct: 273 VGFFIWDSYNSSLLTDTIVALIWIGMVGFALDRIV 307



 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +  +   +  R+L    I+ +       L  +S      L P+  +++++P L +L  +
Sbjct: 122 GIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLRTVPPLAWLPIS 181

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F    P        +AIF IF + +W +  +    +  IP     V++   L+  + 
Sbjct: 182 LAIFQQAQP--------SAIFLIFITAIWPVILNTAAGVQTIPAAYRNVAKVLALNPVEY 233

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P ++P +   + + +   W  +VA+EM+  G       G+G +I  +     L 
Sbjct: 234 FVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGT------GVGFFIWDSYNSSLLT 287

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             + A++ +  V F  D+++
Sbjct: 288 DTIVALIWIGMVGFALDRIV 307


>gi|284052996|ref|ZP_06383206.1| nitrate ABC transporter, permease protein [Arthrospira platensis
           str. Paraca]
 gi|291568385|dbj|BAI90657.1| putative nitrate ABC transport permease protein [Arthrospira
           platensis NIES-39]
          Length = 271

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 12/205 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                V I   W  +     +    D+  + W   I++ RV +  I+AS+I +P+GI IG
Sbjct: 48  VPTASVTIKELWWWLTNPFFNNGPNDMG-IGWNLLISLRRVAIGYIMASVIAVPLGILIG 106

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +    P+ QLL       + PL +        +       +++  + W  L N  
Sbjct: 107 ISKIAAKAFNPYVQLLKPVSPLAWLPLGLYLFR----DSEKTGIFIILISSIWPTLVNTA 162

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G S   +D+ +VA +   + WR    +I+P   P  ++G   + G +W   + +E+   
Sbjct: 163 FGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG 222

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPE 554
                  TGLG +I         P 
Sbjct: 223 -------TGLGYFIWNEWNNLYLPN 240



 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+    +++ +       L   S+       P + +++ +  L +L   
Sbjct: 75  GIGWNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLG 134

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +        +E   IF I  S +W    +    + N+  D  +V+R+   S W+ 
Sbjct: 135 LYLFRD--------SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRT 186

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  + +SM   W  +VA+EM++         G+G +I        L 
Sbjct: 187 IFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYLP 239

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V  + DQ+ 
Sbjct: 240 NIIVAIIIIGLVGLILDQIF 259


>gi|260598202|ref|YP_003210773.1| nitrate transport permease nrtB [Cronobacter turicensis z3032]
 gi|260217379|emb|CBA31423.1| Nitrate transport permease protein nrtB [Cronobacter turicensis
           z3032]
          Length = 293

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V   +A+++ IP+G  IG    +     P   LL       + P+ +
Sbjct: 97  IGWNVLASLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGL 156

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +      +   + W ++ N   G    P+D+  VA    ++ W   R I+
Sbjct: 157 LLFQKAEPASSWT----IFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRIL 212

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + P  +TG   + G AW   + +E+ + G       G+G +I       +   +++ 
Sbjct: 213 FPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVENILIA 266

Query: 559 VLIMCCFVLALN 570
           ++I+    L L 
Sbjct: 267 IVIIGVVGLLLE 278



 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 24/265 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASR 67
           R+ P I  L   V+   I  +   G        D    +          +   +      
Sbjct: 44  RVVPAILGLALLVIAWQIAAVSSKGFPTPLSTLDSALTLFADPFYNEGPNDQGIGWNVLA 103

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     ++ L       L  +   LG +  P++ +++ +  L +L   ++ F    
Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGLLLFQKAE 163

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        A+ + IF   +W M  +  + +  IP D   V+R  +LS W     +  P 
Sbjct: 164 P--------ASSWTIFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRILFPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A++ 
Sbjct: 216 VLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVI 269

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269
           +  V  L +Q   L+ R    W +K
Sbjct: 270 IGVVGLLLEQGLMLIARRF-SWQDK 293


>gi|294011624|ref|YP_003545084.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Sphingobium japonicum UT26S]
 gi|292674954|dbj|BAI96472.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Sphingobium japonicum UT26S]
          Length = 324

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           IG+          + +      ++ RV++   IA++I + +GI IG        + P  Q
Sbjct: 114 IGFTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQ 173

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   P   + P+ ++       +       L+     W I+ N  AG    P  ++ VA
Sbjct: 174 VLRTVPPLAWLPISLAIFQQAQPS----AIFLIFITAIWPIILNTAAGVQTLPVAYRNVA 229

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +    ++  I+LP   P+  TG     G +W A + +E+   G      TG+G +I
Sbjct: 230 KVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFI 283

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +S       + ++ ++ +     AL+R +
Sbjct: 284 WDSYNSSLLTDTIVALIWIGMVGFALDRIV 313



 Score =  143 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +  +   +  R+L    I+ +       L  +S      L P+  +++++P L +L  +
Sbjct: 128 GIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLRTVPPLAWLPIS 187

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F    P        +AIF IF + +W +  +    +  +P     V++   L+  + 
Sbjct: 188 LAIFQQAQP--------SAIFLIFITAIWPIILNTAAGVQTLPVAYRNVAKVLALNPVEY 239

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P ++P +   + + +   W  +VA+EM+  G       G+G +I  +     L 
Sbjct: 240 FVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGT------GVGFFIWDSYNSSLLT 293

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             + A++ +  V F  D+++
Sbjct: 294 DTIVALIWIGMVGFALDRIV 313


>gi|121609547|ref|YP_997354.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|121554187|gb|ABM58336.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter
           eiseniae EF01-2]
          Length = 328

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W   +++ RV +   +A+++ IP G  IG  P ++    P   LL       + PL +
Sbjct: 130 LGWNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWLPLGL 189

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 190 LVFK----GANAAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWQIATRIL 245

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 246 LPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 299

Query: 559 VLIMCCFVLALNRFLWH 575
           + ++    L L   L  
Sbjct: 300 IFVIGIVGLVLEYALIR 316



 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 14/211 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      +  R+     ++ L       +  +   L  +  P++ +++ +  L +L
Sbjct: 126 NDQGLGWNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWL 185

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F         GA  AAI+ IF   +W M  +    +  +P+D   V+R   LS 
Sbjct: 186 PLGLLVFK--------GANAAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSE 237

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ    + +P  +P ++  + +++   W  +VA+EM+  G       GIG ++       
Sbjct: 238 WQIATRILLPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 291

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           ++  I+ A+  +  V  + +  L R    ++
Sbjct: 292 NVKNIIIAIFVIGIVGLVLEYALIRLASAFT 322


>gi|218437639|ref|YP_002375968.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           7424]
 gi|218170367|gb|ACK69100.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           7424]
          Length = 279

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 12/247 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIA 397
           + + +       +          ++ YI+N F  +    L + WL   ++ RV++   ++
Sbjct: 39  ILWWIVALVNPDLMPTPPEALVANLDYIINPFFVRGPGNLGIGWLLISSLRRVLIGFSLS 98

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ IPVG  IG      S + P  Q+L       + P+ ++         +     ++ 
Sbjct: 99  ALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWLPISLAIF----NQADPSAIFVIF 154

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + W  + N   G ++  +D+ +VA    +  W+    IILP   PY  TG   + G A
Sbjct: 155 ITSLWPTIINTALGVASVNSDYLDVAKVLEMPRWKQIFKIILPASLPYIFTGLRISLGIA 214

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           W   +  E+ + G       G+G +I +   + +   V L VL++    L L+  L    
Sbjct: 215 WLVIVAVEMLTGGL------GIGFFIWDEWNRLNLNSVFLAVLVIGLTGLLLDYALGQIQ 268

Query: 578 YLYGTRC 584
            L   R 
Sbjct: 269 VLVTHRK 275



 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 104/265 (39%), Gaps = 23/265 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------ 58
              P     R    +   +  +++  I+ ++   +   T P  +V  +   ++       
Sbjct: 17  TTKPLIFKDRFLLPLTGFVGVIILWWIVALVNPDLM-PTPPEALVANLDYIINPFFVRGP 75

Query: 59  --HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               +      +  R+L    +S L       L   S+     L P++ I++ +  L +L
Sbjct: 76  GNLGIGWLLISSLRRVLIGFSLSALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWL 135

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             ++  F    P        +AIF IF + +W    +    + ++  D  +V++   +  
Sbjct: 136 PISLAIFNQADP--------SAIFVIFITSLWPTIINTALGVASVNSDYLDVAKVLEMPR 187

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W++ + + +P S+P +   + +S+   W  +VA EM+  G       GIG +I       
Sbjct: 188 WKQIFKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGIGFFIWDEWNRL 241

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +L ++  A+L +     L D  L +
Sbjct: 242 NLNSVFLAVLVIGLTGLLLDYALGQ 266


>gi|17228105|ref|NP_484653.1| nitrate transport permease protein [Nostoc sp. PCC 7120]
 gi|17129955|dbj|BAB72567.1| nitrate transport permease protein [Nostoc sp. PCC 7120]
          Length = 279

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 25/261 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSL 61
           F+ +++ P +  L  F+++  ++ +         +    ET  P  I            L
Sbjct: 21  FLWKKVVPPLVALGIFLVIWQLLCLNPNFKLPGPIETFSETWDPFIINPFFDNGESDKGL 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R+     ++ +   +   L   +  +   + PI  +++++P L +L  ++ 
Sbjct: 81  GWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISLA 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F    P        +AIF IF + +W +  +    +  IP+D   V++  RL G + F+
Sbjct: 141 AFQQANP--------SAIFVIFITSIWPILLNTTVGVQQIPQDYINVAKVLRLKGVKYFF 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238
            +  P ++P +   + + +   W  +VA+EM+V G       GIGS+I  A     E +L
Sbjct: 193 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTETNL 246

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V  L D+L+
Sbjct: 247 SEIILALIYVGLVGLLLDRLV 267



 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 13/198 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I  I +GI IG  P + + + P  Q+L   P   + P+ +
Sbjct: 80  LGWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         N     ++   + W IL N   G    P D+  VA    + G +++  I+
Sbjct: 140 AAFQ----QANPSAIFVIFITSIWPILLNTTVGVQQIPQDYINVAKVLRLKGVKYFFKIV 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555
            P   PY  TG     G +W A + +E+   G       G+G++I ++   T + +  E+
Sbjct: 196 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTETNLSEI 249

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L ++ +    L L+R +
Sbjct: 250 ILALIYVGLVGLLLDRLV 267


>gi|209526428|ref|ZP_03274956.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
 gi|209493201|gb|EDZ93528.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima
           CS-328]
          Length = 271

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 12/205 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                + I   W  +     +    D+  + W   I++ RV +  I+AS+I +P+GI IG
Sbjct: 48  VPTASLTIKELWWWLTNPFFNNGPNDMG-IGWNLLISLRRVAIGYIMASVIAVPLGILIG 106

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +    P+ QLL       + PL +        +       +++  + W  L N  
Sbjct: 107 ISKIAAKAFNPYVQLLKPVSPLAWLPLGLYLFR----DSEKTGIFIILISSIWPTLVNTA 162

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G S   +D+ +VA +   + WR    +I+P   P  ++G   + G +W   + +E+   
Sbjct: 163 FGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG 222

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPE 554
                  TGLG +I         P 
Sbjct: 223 -------TGLGYFIWNEWNNLYLPN 240



 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+    +++ +       L   S+       P + +++ +  L +L   
Sbjct: 75  GIGWNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLG 134

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +        +E   IF I  S +W    +    + N+  D  +V+R+   S W+ 
Sbjct: 135 LYLFRD--------SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRT 186

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  + +SM   W  +VA+EM++         G+G +I        L 
Sbjct: 187 IFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYLP 239

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V  + DQ+ 
Sbjct: 240 NIIVAIIIIGLVGLILDQIF 259


>gi|75910738|ref|YP_325034.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75704463|gb|ABA24139.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 279

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 25/261 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSL 61
           F+ +++ P +  L  F+++  ++ +         +    ET  P  I            L
Sbjct: 21  FLWKKVVPPLVALGIFLVIWQLLCLNPNFKLPGPIETFSETWDPFIINPFFDNGESDKGL 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R+     ++ +   +   L   +  +   + PI  +++++P L +L  ++ 
Sbjct: 81  GWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISLA 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F    P        +AIF IF + +W +  +    +  IP+D   V++  RL G + F+
Sbjct: 141 AFQQANP--------SAIFVIFITSIWPILINTTVGVQQIPQDYINVAKVLRLKGVKYFF 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238
            +  P ++P +   + + +   W  +VA+EM+V G       GIGS+I  A     E +L
Sbjct: 193 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTETNL 246

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V  L D+L+
Sbjct: 247 SEIILALIYVGLVGLLLDRLV 267



 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 13/198 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I  I +GI IG  P + + + P  Q+L   P   + P+ +
Sbjct: 80  LGWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         N     ++   + W IL N   G    P D+  VA    + G +++  I+
Sbjct: 140 AAFQ----QANPSAIFVIFITSIWPILINTTVGVQQIPQDYINVAKVLRLKGVKYFFKIV 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555
            P   PY  TG     G +W A + +E+   G       G+G++I ++   T + +  E+
Sbjct: 196 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTETNLSEI 249

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L ++ +    L L+R +
Sbjct: 250 ILALIYVGLVGLLLDRLV 267


>gi|329848543|ref|ZP_08263571.1| nitrate ABC transporter, permease protein [Asticcacaulis
           biprosthecum C19]
 gi|328843606|gb|EGF93175.1| nitrate ABC transporter, permease protein [Asticcacaulis
           biprosthecum C19]
          Length = 299

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   IA+++ +  G +IG        + P  Q+L   P   + P+ +
Sbjct: 101 LFWHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLPISL 160

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       ++   + W I+ N   G    P D+  V+    +    ++  I+
Sbjct: 161 AMLREAQPS----ALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIEFFFKIM 216

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  TG     G +W A + SE+   G       G+G +I +        ++++ 
Sbjct: 217 LPAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGVGFFIWDQYNSSRISDIIVA 270

Query: 559 VLIMCCFVLALNRFL 573
           ++ +      L+R +
Sbjct: 271 LVWVGLVGYVLDRLV 285



 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+     I+ +   +              L P+  +++++P L +L  
Sbjct: 99  KGLFWHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLPI 158

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++       P        +A+F IF + +W +  +    + NIP D   VSR  RL   +
Sbjct: 159 SLAMLREAQP--------SALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIE 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P + P +   + + +   W  +VASEM++ G       G+G +I        +
Sbjct: 211 FFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV------GVGFFIWDQYNSSRI 264

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A++ +  V ++ D+L+
Sbjct: 265 SDIIVALVWVGLVGYVLDRLV 285


>gi|254442958|ref|ZP_05056434.1| ABC transporter, permease protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257266|gb|EDY81574.1| ABC transporter, permease protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 542

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 76/221 (34%), Gaps = 31/221 (14%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++F V V   +A+ + IPVGI  G      + + P   +       V+  +    V  + 
Sbjct: 319 SIFTVFVGFFMAAFVAIPVGIMCGLNKIFMACMTPIISIFKPVSPVVWLLIFQIVVGAFF 378

Query: 446 LNPN-----------------------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +P                        ++ +  +     W  L N   G ++   D   V
Sbjct: 379 PDPENHAMLNFLNSLPLISSLEINPALIFSACTVAMCAVWPALVNTALGVASIDQDHVNV 438

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    +  W     I++P   P    G   + G  W   I +E  S       + GLG +
Sbjct: 439 ARVLRLGFWSRLFKIVIPSALPLVFAGLRISLGVGWMVLIAAEALS------SSDGLGKF 492

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           + +  + G    +    +IM CFV+ +  F    + +   R
Sbjct: 493 VWDEYQNG--SSLTFANIIMVCFVVGIIGFFLDRMMIILQR 531



 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 77/215 (35%), Gaps = 28/215 (13%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R+   +     ++         +   ++     + PI+ I + +  + +L    +     
Sbjct: 318 RSIFTVFVGFFMAAFVAIPVGIMCGLNKIFMACMTPIISIFKPVSPVVWLLIFQIVVGAF 377

Query: 127 YPG----------------KVIGAELAAIF---AIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +P                   +    A IF    +    VW    +    + +I +D   
Sbjct: 378 FPDPENHAMLNFLNSLPLISSLEINPALIFSACTVAMCAVWPALVNTALGVASIDQDHVN 437

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V+R  RL  W + + + +P ++P +   + +S+  GW  ++A+E +   D      G+G 
Sbjct: 438 VARVLRLGFWSRLFKIVIPSALPLVFAGLRISLGVGWMVLIAAEALSSSD------GLGK 491

Query: 228 YIALAIKEQD---LLAILYAMLTMLGVIFLYDQLL 259
           ++    +         I+     +  + F  D+++
Sbjct: 492 FVWDEYQNGSSLTFANIIMVCFVVGIIGFFLDRMM 526


>gi|291571065|dbj|BAI93337.1| nitrate ABC-type transport permease protein [Arthrospira platensis
           NIES-39]
          Length = 278

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63
            +++ P+   +L F++V  +   +        + R + +   + +D           L  
Sbjct: 27  GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 85

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+     ++++       L   +  +   L PI  I+++IP L +L  ++  F
Sbjct: 86  QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P        +AIF IF + +W +  +  + +  IP+D   VSR  RL     F+ +
Sbjct: 146 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 197

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P +   + + +   W  ++A+EM++ G       GIG +I  A     +  I+ 
Sbjct: 198 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 251

Query: 244 AMLTMLGVIFLYDQLL 259
           A++ +  V  L D+ +
Sbjct: 252 AVIYVGVVGLLLDKFI 267



 Score =  148 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A ++ + +G+ IG    +   + P  Q+L   P   + P+ +
Sbjct: 83  LFWQILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +     + +       ++     W I+ N   G    P D+  V+    +    ++  I+
Sbjct: 143 AGFERANPS----AIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKIL 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG     G +W A I +E+   G       G+G +I ++       +++L 
Sbjct: 199 FPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILA 252

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    L L++F+
Sbjct: 253 VIYVGVVGLLLDKFI 267


>gi|73540035|ref|YP_294555.1| nitrate transport permease [Ralstonia eutropha JMP134]
 gi|72117448|gb|AAZ59711.1| Nitrate transport permease [Ralstonia eutropha JMP134]
          Length = 300

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 83/212 (39%), Gaps = 13/212 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           G  W +   +     Y    +   V W    ++ RV     +A++I IP G  +G    +
Sbjct: 80  GATWNAAVPLFADPFYRNGPNDQGVGWNVLASLARVGAGFGLAALIGIPAGFILGRFAFL 139

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P   LL       + P+ +          N      +   + W ++ N   G + 
Sbjct: 140 NAMASPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMVINTAVGVTR 195

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G    
Sbjct: 196 VPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 251

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             TG+G ++ +         +V+ + ++    
Sbjct: 252 --TGIGFWLWDEWNNLKVEHIVIAIFVIGIIG 281



 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 20/245 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           R  P +     FVL    I  ++  I          VP           +   +      
Sbjct: 51  RGVPPLLGFALFVLAWHGIATMIPAIPTPGATWNAAVPLFADPFYRNGPNDQGVGWNVLA 110

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ L       +  +   L  +  P++ +++ +  L +L   ++ F    
Sbjct: 111 SLARVGAGFGLAALIGIPAGFILGRFAFLNAMASPVISLLRPVSPLAWLPIGLLLFKAAN 170

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 171 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPA 222

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 223 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFV 276

Query: 248 MLGVI 252
           +  + 
Sbjct: 277 IGIIG 281


>gi|309779956|ref|ZP_07674710.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308921315|gb|EFP66958.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 287

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 17/267 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVN 369
                    +R  F    ++         +  + W  +   +       + W++   +  
Sbjct: 19  AAPESRRFAVRDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFA 78

Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
              Y    +   V W    ++ RV     +A++I IP G  IG    +++   P   LL 
Sbjct: 79  DPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLR 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + P+ +        + N      +   + W ++ N   G +  P D+  VA   
Sbjct: 139 PVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVL 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           +++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ + 
Sbjct: 195 NLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDE 248

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   +V+ + ++    L L   L
Sbjct: 249 WNNLKVEHIVIAIFVIGVVGLLLEHAL 275



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           R FP +  L+ FVL    I   +  +       +  V            +   +      
Sbjct: 38  RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 97

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 98  SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +  L 
Sbjct: 264 IGVVGLLLEHALL 276


>gi|119897234|ref|YP_932447.1| putative nitrate transport system permease [Azoarcus sp. BH72]
 gi|119669647|emb|CAL93560.1| putative nitrate transport system, permease protein [Azoarcus sp.
           BH72]
          Length = 310

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W +   + +   YQ   +   + W    ++ RV +   IA+++ IP G  +G    +S 
Sbjct: 92  TWNAAVVLFSDPFYQAGPNDQGIGWNVLSSLQRVGIGFGIAALVGIPAGFMLGRFAVLSQ 151

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P   LL       + P+ +                 +   + W ++ N   G +  P
Sbjct: 152 MMNPIISLLRPVSPLAWLPIGLLVFQRADPAATWT----IFICSIWPMILNTAQGVTRVP 207

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA   +++ W+ +  I+ P + PY +TG   + G AW   + +E+ + G      
Sbjct: 208 QDYLNVARVLNLSEWKVFTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGG------ 261

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G ++ +         +++ + ++    L L + L
Sbjct: 262 VGIGFWVWDEWNNLKVEHIIIAIFVIGTVGLILEQAL 298



 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 20/253 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYAS 66
           R + P +  L   V +  +  +   G+       +               +   +     
Sbjct: 60  RAVLPPVIGLALLVGLWHLGTMNGGGLPSPAKTWNAAVVLFSDPFYQAGPNDQGIGWNVL 119

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     I+ L       +  +   L  ++ PI+ +++ +  L +L   ++ F   
Sbjct: 120 SSLQRVGIGFGIAALVGIPAGFMLGRFAVLSQMMNPIISLLRPVSPLAWLPIGLLVFQRA 179

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AA + IF   +W M  +  Q +  +P+D   V+R   LS W+ F  +  P
Sbjct: 180 DP--------AATWTIFICSIWPMILNTAQGVTRVPQDYLNVARVLNLSEWKVFTKILFP 231

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+ 
Sbjct: 232 AVLPYMLTGIRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLKVEHIIIAIF 285

Query: 247 TMLGVIFLYDQLL 259
            +  V  + +Q L
Sbjct: 286 VIGTVGLILEQAL 298


>gi|17230827|ref|NP_487375.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120]
 gi|17132430|dbj|BAB75034.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120]
          Length = 273

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
             WL   ++ RVVV  ++A+ I IP+G  I         I P  QLL       + PL  
Sbjct: 78  FFWLILASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQ 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      L PN     ++     W I+ N   G    P D++ V+    ++    +  I+
Sbjct: 138 AVF----LKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKIL 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   A G +W A + +E+       L   G+G +I ++    +  E++L 
Sbjct: 194 LPATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILA 247

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L++ +
Sbjct: 248 IVYLGAVGLVLDKIM 262



 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 87/194 (44%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R++   +++         + + +      + P++ +++ +  L +L      F+ 
Sbjct: 83  LASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAVFLK 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF I  + +W +  +    +  +P+D   VS+   LS  + F+ + +
Sbjct: 143 PNP--------SAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKILL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +++   W  VVA+EM+      +   GIG +I  A    ++  ++ A+
Sbjct: 195 PATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAI 248

Query: 246 LTMLGVIFLYDQLL 259
           + +  V  + D+++
Sbjct: 249 VYLGAVGLVLDKIM 262


>gi|254469776|ref|ZP_05083181.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211961611|gb|EEA96806.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 668

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 92/532 (17%), Positives = 185/532 (34%), Gaps = 40/532 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L V    Q A  T   +  A+   ++   V   LA KS     +L PILD+MQ++PI  +
Sbjct: 148 LAVFGQWQSAMVTLASIAIAVPFGVIGGLVLGILAYKSAGFERLLRPILDLMQTVPIFAY 207

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F            ++A+FA     +  M   +  +L ++P  L E  +    +
Sbjct: 208 LVPILFLFG--------FGPVSALFATIIYAMPPMVRVVLVALQSVPTQLHEAGQMAGCT 259

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q  W + +P ++P L+  +   +      V+ + +I  G       G+G  +  A++ 
Sbjct: 260 SRQMMWKVLLPSALPTLMVGVNQVIMLSLNMVIIASIIGAG-------GLGYDVLAALRR 312

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
            D+   + A L ++ +    D+L     +     + K  ++    +      +L +    
Sbjct: 313 LDIGGGIEAGLAIVVIAIALDRLSQAFSQQDHGQNEKLGIDHIKPLPLVGIVLLSIVVLA 372

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI------ 346
              +   +      +            +  I  +F E F    +      +L I      
Sbjct: 373 LLGKLFPFLQSYPETLTVTTGSFWDEAIKWININFFEVFEAFKTALLTYLLLPIKRFFVG 432

Query: 347 --FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIW 401
             + + +V    IG     +   +   T    + V  L     IT++   V +++A+ I 
Sbjct: 433 IPWAWGIVALGLIGWRVGDLKLGLLCTTLAGFIAVNGLWRDAMITVYLCGVSVLLAAAIG 492

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+W G     +  +      L   P+ V+   VV        +  + + L  +    
Sbjct: 493 MPLGVWAGQSELANRVLGTLVDTLQTLPSFVYLIPVVMLFRVGEFSAMVAIVLYAMAPAL 552

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            Y       G         E       T W+    I LP   P  + G       A +  
Sbjct: 553 RY----AAHGIREINPQVIEAGKVSGCTRWQLLWRIKLPLAVPSLLLGLNQTIMLALSML 608

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +++ +            LG  +  +  K +  + ++  L +    +  +R L
Sbjct: 609 VITALVGTRD-------LGQEVYIALTKANTGQGIVAGLAVAFIAIIADRIL 653



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 88/301 (29%), Gaps = 20/301 (6%)

Query: 281 ADSWVLYLFRK-TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
             +W   L  + ++F+ ++   +           +     + V             ++  
Sbjct: 46  PSAWEWKLDNRISSFMSWLVEDASFELFTFRELTRFFSALIEVPYDAVRALLADGFNSGV 105

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               +++        V + +   +                ++L     ++  ++ + +  
Sbjct: 106 GQQAVEVLPSLSWIAVTLLLTLLAFRVGGRRLALLVAGCFLYLAVFGQWQSAMVTLASIA 165

Query: 400 IWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           I +P G+  G                ++P   L+   P   +   ++    +  ++    
Sbjct: 166 IAVPFGVIGGLVLGILAYKSAGFERLLRPILDLMQTVPIFAYLVPILFLFGFGPVS---- 221

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
                I      ++  V+    + P    E       T  +    ++LP   P  + G  
Sbjct: 222 ALFATIIYAMPPMVRVVLVALQSVPTQLHEAGQMAGCTSRQMMWKVLLPSALPTLMVGVN 281

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                + N  I++ +   G       GLG  +  +  +      +   L +    +AL+R
Sbjct: 282 QVIMLSLNMVIIASIIGAG-------GLGYDVLAALRRLDIGGGIEAGLAIVVIAIALDR 334

Query: 572 F 572
            
Sbjct: 335 L 335


>gi|188591095|ref|YP_001795695.1| nitrate ABC transporter transmembrane protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937989|emb|CAP62973.1| NITRATE ABC TRANSPORTER, TRANSMEMBRANE component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 296

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 13/212 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           G  W +   +     Y    +   + W    ++ RV     +A+++ IP G  IG    +
Sbjct: 76  GATWNAAVPLFADPFYRNGPNDQGIGWNVLASLARVAAGFGLAALVGIPAGFVIGRFAFL 135

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P   LL       + P+ +          N      +   + W ++ N   G + 
Sbjct: 136 NAMTAPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMVINTAVGVTR 191

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G    
Sbjct: 192 VPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 247

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             TG+G ++ +         +V+ + ++    
Sbjct: 248 --TGIGFWLWDEWNNLKVEHIVIAIFVIGLIG 277



 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 20/242 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           P +     FVL    I  L+  I          VP           +   +      +  
Sbjct: 50  PPLLGFALFVLAWHGIASLIPAIPTPGATWNAAVPLFADPFYRNGPNDQGIGWNVLASLA 109

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ +   ++ L       +  +   L  +  P++ +++ +  L +L   ++ F    P  
Sbjct: 110 RVAAGFGLAALVGIPAGFVIGRFAFLNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP-- 167

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P  +P
Sbjct: 168 ------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLP 221

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  +  
Sbjct: 222 YMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFVIGL 275

Query: 251 VI 252
           + 
Sbjct: 276 IG 277


>gi|300310541|ref|YP_003774633.1| nitrate transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300073326|gb|ADJ62725.1| ABC-type nitrate transporter, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+++ IP+G  IG    ++    P   LL       + P+ +
Sbjct: 109 IGWNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLAWLPIGL 168

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   + N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 169 LVFK----SANPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKIL 224

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            P + PY +TG   + G AW   + +E+ + G       G+G ++ +     +
Sbjct: 225 FPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 271



 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 94/222 (42%), Gaps = 18/222 (8%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   +      +  R+ +   ++ L          +   L  +  PI+ +++ +  L 
Sbjct: 103 SPNDQGIGWNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLA 162

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   ++ F +  P        AAI++IF   +W M  +    +  +P+D   V+R   L
Sbjct: 163 WLPIGLLVFKSANP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNL 214

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S W+    +  P  +P ++  + +S+   W  +VA+EM+  G       GIG ++     
Sbjct: 215 SEWKVLTKILFPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWN 268

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
             ++  I+ A++ +  V  + +QL    ++  +  F  E+  
Sbjct: 269 NLNVPHIIIAIVVIGVVGLVLEQL----LVALAKAFTYEQVN 306


>gi|283781845|ref|YP_003372600.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi
           DSM 6068]
 gi|283440298|gb|ADB18740.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi
           DSM 6068]
          Length = 279

 Score =  148 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++  V    ++A ++  P+G  +G  P ++    P  Q L       + PL +
Sbjct: 85  ILRFTWYSLVLVAKGYLLAIVLGAPLGFALGSSPLLTRMFDPVIQFLRPVSPLAWLPLGL 144

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                            +   + W  + N   G  A P D+  VA    ++ W     I+
Sbjct: 145 VLFG----KSEPAAIFTIALCSMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTMLWKIM 200

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG   + G AW   + +E+ +         G+G ++ +      +  ++L 
Sbjct: 201 LPAALPYMFTGFRLSLGIAWLVIVAAEMLTG------VPGVGGFLWQEYNSLIYEHILLC 254

Query: 559 VLIMCCFVLALNRFL 573
           +L +    LAL+R +
Sbjct: 255 ILTIGAVGLALDRLM 269



 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 21  DLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDV--------------HSLPQYA 65
           D +   LV  ++ + +  I   T  P     +    +                  + ++ 
Sbjct: 30  DFILLPLVGALLFVAVWWISSATWAPSLPSPLKTWEMSRLYVMEPFAKRGELDQGILRFT 89

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             + + +    +++++           S  L  +  P++  ++ +  L +L   +V F  
Sbjct: 90  WYSLVLVAKGYLLAIVLGAPLGFALGSSPLLTRMFDPVIQFLRPVSPLAWLPLGLVLFGK 149

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAIF I    +W    +  Q +  IP+D   V+R  RLS W   W + +
Sbjct: 150 SEP--------AAIFTIALCSMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTMLWKIML 201

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +     +S+   W  +VA+EM+        +PG+G ++           IL  +
Sbjct: 202 PAALPYMFTGFRLSLGIAWLVIVAAEMLTG------VPGVGGFLWQEYNSLIYEHILLCI 255

Query: 246 LTMLGVIFLYDQLL 259
           LT+  V    D+L+
Sbjct: 256 LTIGAVGLALDRLM 269


>gi|113866388|ref|YP_724877.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525164|emb|CAJ91509.1| ABC-type transporter, permease component: NitT family [Ralstonia
           eutropha H16]
          Length = 301

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A+++ IP G  IG    +++   P   LL       + P+ +
Sbjct: 105 IGWNVLASLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLPIGL 164

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G +  P D+  VA    ++ W+ +  ++
Sbjct: 165 LLFKAA----NPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVL 220

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   + G AW   + +E+ + G      TG+G ++ +         +V+ 
Sbjct: 221 FPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIA 274

Query: 559 VLIMCCFV 566
           + ++    
Sbjct: 275 IFVIGIIG 282



 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 20/245 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           +  P +     FVL    I  ++  I          VP           +   +      
Sbjct: 52  KAVPPVLGFALFVLAWHGIATMIPAIPTPQATWNAAVPLFADPFYRNGPNDQGIGWNVLA 111

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ L       L  +   L  +  P++ +++ +  L +L   ++ F    
Sbjct: 112 SLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLPIGLLLFKAAN 171

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 172 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPA 223

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 224 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFV 277

Query: 248 MLGVI 252
           +  + 
Sbjct: 278 IGIIG 282


>gi|253998066|ref|YP_003050129.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp.
           SIP3-4]
 gi|253984745|gb|ACT49602.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp.
           SIP3-4]
          Length = 305

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A++I IP+G  IG    +S    P   +L       + P+ +
Sbjct: 111 IGWNILASLERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGL 170

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N     ++     W ++ N   G S  P D+  VA   +++ W+    I+
Sbjct: 171 LVFKAA----NPAAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKIL 226

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   + G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 227 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 280

Query: 559 VLIMCCFV 566
           + ++    
Sbjct: 281 IFVVGIVG 288



 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 20/244 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYASRT 68
           + P +F +LA + V  +I+     +                     + +   +      +
Sbjct: 59  LLPPVFGVLAMIAVWTLISYQSPNLPGPVSTWHSAVELFSDPFYNNSPNDQGIGWNILAS 118

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+     ++ L       +  + + +  +  PI+ I++ +  L +L   ++ F    P
Sbjct: 119 LERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGLLVFKAANP 178

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   AAI+ IF S +W M  +    +  +P+D   V++   LS W+    +  PF 
Sbjct: 179 --------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFV 230

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+ A+  +
Sbjct: 231 LPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIFVV 284

Query: 249 LGVI 252
             V 
Sbjct: 285 GIVG 288


>gi|224825054|ref|ZP_03698160.1| nitrate ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602725|gb|EEG08902.1| nitrate ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 304

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 13/210 (6%)

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W+S   +     Y    +   V W    ++ RV +   +A+++ IP G  +G    +S+
Sbjct: 85  TWESAKLLFADPFYRNGPNDQGVGWNILNSLGRVGIGFGLAALVGIPAGFILGRFAFVSA 144

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
              P   LL       + P+ +          +     ++   + W ++ N  AG  A P
Sbjct: 145 MFAPVISLLRPVSPLAWLPIGLLVFKAA----SPASIWVIFISSVWPMILNTAAGVRAVP 200

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++ ++ +  I+ P + P+ +TG   + G AW   + +E+ + G      
Sbjct: 201 QDYLNVARVLRLSEFKVFTTILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGG------ 254

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            G+G ++ +     +   +++ + I+    
Sbjct: 255 VGIGFWVWDEWNNLNVEHIIIAIFIVGLVG 284



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 14/190 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   +  +  P++ +++ +  L +L   ++ 
Sbjct: 109 WNILNSLGRVGIGFGLAALVGIPAGFILGRFAFVSAMFAPVISLLRPVSPLAWLPIGLLV 168

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        A+I+ IF S VW M  +    +  +P+D   V+R  RLS ++ F  
Sbjct: 169 FKAASP--------ASIWVIFISSVWPMILNTAAGVRAVPQDYLNVARVLRLSEFKVFTT 220

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 221 ILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHII 274

Query: 243 YAMLTMLGVI 252
            A+  +  V 
Sbjct: 275 IAIFIVGLVG 284


>gi|149928370|ref|ZP_01916610.1| nitrate transport permease [Limnobacter sp. MED105]
 gi|149822905|gb|EDM82151.1| nitrate transport permease [Limnobacter sp. MED105]
          Length = 288

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 109/254 (42%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--------SLPQYA 65
           ++ P +  +   +L+  I+     G +     + I D   + ++           +    
Sbjct: 36  KLVPPVVVMTILLLIWEILCS-TEGARLPAPSKVITDTWELIINPLYDNGGNDVGMAWQI 94

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++++       L  +S      L P+  +++++P L +L  ++  F +
Sbjct: 95  LASLERVAIGYSLAVVVGVALGVLVGQSTWALRGLDPLFQVLRTVPPLAWLPLSLAGFQD 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP D   VSR  + +G + FW + +
Sbjct: 155 GNP--------SAIFVIFITAIWPIIINTSVGIRNIPEDYRNVSRVIQHNGIEYFWKIML 206

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  +VA+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 207 PAAAPYIFSGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLISDIVLAL 260

Query: 246 LTMLGVIFLYDQLL 259
           + +  V F+ D+ +
Sbjct: 261 VYVGIVGFILDRCV 274



 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 11/212 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ I   +      DV  + W    ++ RV +   +A ++ + +G+ +G        + 
Sbjct: 72  TWELIINPLYDNGGNDVG-MAWQILASLERVAIGYSLAVVVGVALGVLVGQSTWALRGLD 130

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL  S   +   NP+     ++     W I+ N   G    P D+
Sbjct: 131 PLFQVLRTVPPLAWLPL--SLAGFQDGNPS--AIFVIFITAIWPIIINTSVGIRNIPEDY 186

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + V+      G  ++  I+LP   PY  +G     G +W A + +E+   G       G+
Sbjct: 187 RNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG------VGI 240

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           G +I ++       ++VL ++ +      L+R
Sbjct: 241 GFFIWDAWNSSLISDIVLALVYVGIVGFILDR 272


>gi|313200132|ref|YP_004038790.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp.
           MP688]
 gi|312439448|gb|ADQ83554.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp.
           MP688]
          Length = 302

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 96/272 (35%), Gaps = 11/272 (4%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           ++     +    +P      +  +      +  P  F  L      + +           
Sbjct: 25  VKAAVQPAAARMAPSKRPSARALKLRAFFEWLLPPVFGVLAMIAVWTLISYQSPNLPGPV 84

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
                A +       + +  D   + W    ++ RV +   +A+++ IP+G  IG    +
Sbjct: 85  STWHSAVELFSDPFYNNSPND-QGIGWNILASLERVGLGFGLAALVGIPLGFIIGRFQFM 143

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S    P   +L       + P+ +          N     ++     W ++ N   G S 
Sbjct: 144 SRMAAPIIGILRPVSPLAWLPIGLLVFKAA----NPAAIWVIFISAIWPMIINTAVGVSK 199

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA   +++ W+    I+ P + PY +TG   + G AW   + +E+ + G    
Sbjct: 200 VPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG---- 255

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
              G+G ++ +     +   +++ + ++    
Sbjct: 256 --VGIGFWVWDEWNNLNVEHIIIAIFVVGIVG 285



 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 20/244 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYASRT 68
           + P +F +LA + V  +I+     +                     + +   +      +
Sbjct: 56  LLPPVFGVLAMIAVWTLISYQSPNLPGPVSTWHSAVELFSDPFYNNSPNDQGIGWNILAS 115

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+     ++ L       +  + + +  +  PI+ I++ +  L +L   ++ F    P
Sbjct: 116 LERVGLGFGLAALVGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGLLVFKAANP 175

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   AAI+ IF S +W M  +    +  +P+D   V++   LS W+    +  PF 
Sbjct: 176 --------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFV 227

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+ A+  +
Sbjct: 228 LPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIFVV 281

Query: 249 LGVI 252
             V 
Sbjct: 282 GIVG 285


>gi|75907097|ref|YP_321393.1| nitrate transport permease [Anabaena variabilis ATCC 29413]
 gi|75700822|gb|ABA20498.1| Nitrate transport permease [Anabaena variabilis ATCC 29413]
          Length = 283

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L + WL   ++ RV++  ++ +++ IP+G  IG        + P  Q+        + P+
Sbjct: 82  LGIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPI 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++  +    +       ++   + W  + N   G ++ P D+ +VA    +  WR    
Sbjct: 142 ALAIFNLADPS----AIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRRITK 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II P   PY  TG   + G AW   +  E+ + G       G+G ++ +   + +   V 
Sbjct: 198 IIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IGIGFFVWDEWSRLNLSSVF 251

Query: 557 LGVLIMCCFVLALN 570
           L V I+    L L+
Sbjct: 252 LAVFIIGLTGLILD 265



 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 102/262 (38%), Gaps = 23/262 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------H 59
           P  +   +       L  +L+  +I +  H +   T P  +V  +   L+          
Sbjct: 24  PILLRDVVILPALGFLGIILLWWVIALTNHELM-PTPPEALVANLDYILNPFYQRGPGNL 82

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+L   ++  +       L   SR   + L PI+ I + +  L +L   
Sbjct: 83  GIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPIA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F    P        +AIF IF + +W    +    + ++P+D  +V+R   +  W++
Sbjct: 143 LAIFNLADP--------SAIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRR 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P S+P +   + +S+   W  +VA EM+  G       GIG ++       +L 
Sbjct: 195 ITKIIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGGI------GIGFFVWDEWSRLNLS 248

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
           ++  A+  +     + D  + +
Sbjct: 249 SVFLAVFIIGLTGLILDFAVGK 270


>gi|207727822|ref|YP_002256216.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206591063|emb|CAQ56675.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 287

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 97/260 (37%), Gaps = 17/260 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY--- 373
              R       ++         +  + W  +   +       + W++   +     Y   
Sbjct: 26  PAWRDWLVAAVVKGFPPALGFALFVLAWQGITMAIPALPTPAVTWKAAVALFADPFYRNG 85

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   V W    ++ RV     +A+++ IP G  +G    +++   P   LL       +
Sbjct: 86  PNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAW 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        + N      +   + W ++ N   G +  P D+  VA   +++ W+ 
Sbjct: 146 LPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKI 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ +        
Sbjct: 202 FTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVE 255

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +V+ + ++    L L + L
Sbjct: 256 HIVIAIFVIGVVGLLLEQAL 275



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP       FVL    I + +  +       +  V            +   +      
Sbjct: 38  KGFPPALGFALFVLAWQGITMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 97

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 98  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 264 IGVVGLLLEQALL 276


>gi|170742926|ref|YP_001771581.1| nitrate ABC transporter inner membrane subunit [Methylobacterium
           sp. 4-46]
 gi|168197200|gb|ACA19147.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium
           sp. 4-46]
          Length = 279

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W+ +          D    I L   ++ RV +  ++A ++ +P+G  IG  P +S
Sbjct: 62  VGATIWRHLRDPFYDRGPNDKGLGIQLAH-SVARVGLGYLLAVLVALPLGFLIGMSPLMS 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + PF Q+L       + PL +  +    L+       ++   + W +L N   G +  
Sbjct: 121 RALDPFIQVLKPVSPLAWMPLALYTIKDSGLS----AIFVIFICSLWPMLINTAFGVAGT 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             ++  VA +  +   R    +ILP   P  +TG   + G AW   + +E+   G     
Sbjct: 177 RREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            TG+G ++       S   V+  +L++    + L++ L  
Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270



 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 23/233 (9%)

Query: 38  GIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           G      P D+   +   L         +   L    + +  R+    ++++L       
Sbjct: 52  GRSAMPGPLDVGATIWRHLRDPFYDRGPNDKGLGIQLAHSVARVGLGYLLAVLVALPLGF 111

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   S  +   L P + +++ +  L ++   +          +  + L+AIF IF   +W
Sbjct: 112 LIGMSPLMSRALDPFIQVLKPVSPLAWMPLALY--------TIKDSGLSAIFVIFICSLW 163

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            M  +    +    R+   V+R+  +   ++ + + +P + P ++  M +S+   W  +V
Sbjct: 164 PMLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIV 223

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           A+EM+V G       GIG ++        +  ++ ++L +  V  + DQLL R
Sbjct: 224 AAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270


>gi|226940110|ref|YP_002795183.1| binding-protein-dependent transport systems inner membrane
           component [Laribacter hongkongensis HLHK9]
 gi|226715036|gb|ACO74174.1| binding-protein-dependent transport systems inner membrane
           component [Laribacter hongkongensis HLHK9]
          Length = 272

 Score =  148 bits (373), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 18/247 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--------G 383
           L L   +  +    +    +    A+   W +    +       + Y+ WL         
Sbjct: 17  LALVVWEACARAGLMSAVVLPAPSAVAAKWWASLLPMQPHDPAQMGYLAWLFSGEMIHDA 76

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M+RVVV  ++ + + +P+G+ +G  P + +   P  Q+L   P   + PL +     
Sbjct: 77  ISSMYRVVVGFLVGAGLALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAILWFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N     L+  G  + +L N IAG +     +   A +  +  W  +  +ILP   
Sbjct: 137 G----NPPSFFLISIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVILPAAT 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY + G     G A+   IVSE+ +         GLG  I E+ E     +++ G+L + 
Sbjct: 193 PYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAGMLTIG 246

Query: 564 CFVLALN 570
              LA++
Sbjct: 247 LLGLAID 253



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 83/239 (34%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +       +       +                L    +   A  +  R++   ++    
Sbjct: 34  VVLPAPSAVAAKWWASLLPMQPHDPAQMGYLAWLFSGEMIHDAISSMYRVVVGFLVGAGL 93

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +   + RL  +  P+L +++ IP + ++   +++F    P         + F I
Sbjct: 94  ALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAILWFGLGNPP--------SFFLI 145

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +    + ++       +R+  +  W  F  + +P + P ++  + + +  
Sbjct: 146 SIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVILPAATPYILAGVRIGIGT 205

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +  V+ SEMI V D      G+G  I  A +      I+  MLT+  +    D  + R
Sbjct: 206 AFIVVIVSEMIAVND------GLGFRILEAREFMWSDKIIAGMLTIGLLGLAIDTAISR 258


>gi|187927343|ref|YP_001897830.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii
           12J]
 gi|187724233|gb|ACD25398.1| nitrate ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
          Length = 283

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 17/267 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVN 369
                    +R  F    ++         +  + W  +   +       + W++   +  
Sbjct: 15  AAPESRRFAVRDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFA 74

Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
              Y    +   V W    ++ RV     +A++I IP G  IG    +++   P   LL 
Sbjct: 75  DPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLR 134

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + P+ +        + N      +   + W ++ N   G +  P D+  VA   
Sbjct: 135 PVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVL 190

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           +++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ + 
Sbjct: 191 NLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDE 244

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   +V+ + ++    L L   L
Sbjct: 245 WNNLKVEHIVIAIFVIGVVGLLLEHAL 271



 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           R FP +  L+ FVL    I   +  +       +  V            +   +      
Sbjct: 34  RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +  L 
Sbjct: 260 IGVVGLLLEHALL 272


>gi|229544994|ref|ZP_04433719.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX1322]
 gi|229309886|gb|EEN75873.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX1322]
          Length = 569

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|260460414|ref|ZP_05808666.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034059|gb|EEW35318.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 659

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 83/530 (15%), Positives = 164/530 (30%), Gaps = 51/530 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +  A+   ++        A +       ++ P LD+MQ+IP   +L   ++ F
Sbjct: 148 AMLTLALISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 207

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N        + ++A+ A        M  +    L  +P ++++ S     +  QK W +
Sbjct: 208 GN--------SPVSAMIATAIFATPPMVRATMLGLSRVPSEIDDFSEMAGCTARQKLWRV 259

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P L+  +   +      V+ + MI  G       G+G  + LA++   +   + 
Sbjct: 260 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 312

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           A L ++ +    D+L        ++K              W  Y             +  
Sbjct: 313 AGLAIVALAIALDRLS----QAIAHKQAKGNIHQQAGPSFWRRYPNLTLAIAILAVTTLI 368

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQL-----CSNQRVSYMLDI----------FW 348
             F P    V K         +    N++ +         RV+ +L++          F 
Sbjct: 369 GLFVPAFAAVPKAITFTTAPLWKAAVNWVTINFFDTIEAFRVALILNVLNPVRAFCEGFP 428

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
           +     +     +Q  G  +         +    G       T++   +   IA +I IP
Sbjct: 429 WLGAVLLLGLAGYQLSGLRLAALVAALTAFCAVTGLWEKTMATVYLCGISAFIACLIGIP 488

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+           + P    L   P+  F   VV       +   +      +     Y
Sbjct: 489 IGLMAARSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY 548

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G    P    E A     T  + +  + LP   P  + G       A    I+
Sbjct: 549 ----TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIII 604

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +            LG  +  +  K      ++  L +    +  +R  
Sbjct: 605 CAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 647



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 83/214 (38%), Gaps = 19/214 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V  L +    T      +  I+ L       +AA+S R   ++ P++D +Q +P   F+ 
Sbjct: 461 VTGLWEKTMATVYLCGISAFIACLIGIPIGLMAARSDRFEKIVTPVIDTLQVLPSFCFII 520

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+ F           ++ A+ A     V          +  +P  L E ++    +  
Sbjct: 521 PVVMLFRVG--------DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPR 572

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F+ + +P ++P ++  +  ++      ++   M+   D       +G  + +A+ + D
Sbjct: 573 QTFFRVQLPLALPEIMLGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKAD 625

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
               + A L +  +  + D+L       W+ K R
Sbjct: 626 SGRGIVAGLAIAFIGIVADRL----FNAWTAKAR 655



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 23/287 (8%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVI---RFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +          + +N+  L R++  +      F  N L           + +       G
Sbjct: 52  VADWVSALMRWIKSNLSWLTRSITAVLGVPLDFALNLLAKSFKIGHGADVSVLPRLSWIG 111

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF---- 410
           V                        +++     +   +L +    I +P  I  G     
Sbjct: 112 VCAAAFIAGHAAGGRKLGLLVGGCFLYIALFGQWTSAMLTLALISIAVPFCIVTGLFAGI 171

Query: 411 ----RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
               +P     I  P   L+   P   +   ++       ++  +  ++         ++
Sbjct: 172 WAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPPMV 227

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              + G S  P++  + +     T  +    ++LP   P  + G       A N  I++ 
Sbjct: 228 RATMLGLSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIAS 287

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  +  +       E +   L +    +AL+R 
Sbjct: 288 MIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327


>gi|241661876|ref|YP_002980236.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii
           12D]
 gi|240863903|gb|ACS61564.1| nitrate ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 283

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 97/257 (37%), Gaps = 17/257 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY---QDV 376
           R  F    ++         +  + W  +   +       + W++   +     Y    + 
Sbjct: 25  RDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPND 84

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V W    ++ RV     +A++I IP G  IG    +++   P   LL       + P+
Sbjct: 85  QGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPI 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        + N      +   + W ++ N   G +  P D+  VA   +++ W+ +  
Sbjct: 145 GLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTR 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ +         +V
Sbjct: 201 VLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIV 254

Query: 557 LGVLIMCCFVLALNRFL 573
           + + ++    L L   L
Sbjct: 255 IAIFVIGVVGLLLEHAL 271



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           R FP +  L+ FVL    I   +  +       +  V            +   +      
Sbjct: 34  RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +  L 
Sbjct: 260 IGVVGLLLEHALL 272


>gi|257416825|ref|ZP_05593819.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis AR01/DG]
 gi|257158653|gb|EEU88613.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis ARO1/DG]
          Length = 569

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|29377126|ref|NP_816280.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecalis V583]
 gi|227554134|ref|ZP_03984181.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter protein [Enterococcus faecalis
           HH22]
 gi|229549238|ref|ZP_04437963.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis ATCC 29200]
 gi|255971952|ref|ZP_05422538.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255975006|ref|ZP_05425592.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T2]
 gi|256616850|ref|ZP_05473696.1| OpuABC [Enterococcus faecalis ATCC 4200]
 gi|256763274|ref|ZP_05503854.1| OpuABC [Enterococcus faecalis T3]
 gi|256957876|ref|ZP_05562047.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis DS5]
 gi|256961126|ref|ZP_05565297.1| OpuABC [Enterococcus faecalis Merz96]
 gi|257079813|ref|ZP_05574174.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis JH1]
 gi|257081841|ref|ZP_05576202.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           E1Sol]
 gi|257087618|ref|ZP_05581979.1| ABC transporter permease [Enterococcus faecalis D6]
 gi|257090777|ref|ZP_05585138.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           CH188]
 gi|257420040|ref|ZP_05597034.1| ABC betaine transporter permease and substrate binding protein
           [Enterococcus faecalis T11]
 gi|257421781|ref|ZP_05598771.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           X98]
 gi|293384072|ref|ZP_06629966.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis R712]
 gi|293386886|ref|ZP_06631456.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis S613]
 gi|294781364|ref|ZP_06746706.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|300860960|ref|ZP_07107047.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|307270648|ref|ZP_07551939.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|307276884|ref|ZP_07557995.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|307285514|ref|ZP_07565653.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|307287539|ref|ZP_07567582.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|312902408|ref|ZP_07761614.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|312907977|ref|ZP_07766960.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|312953668|ref|ZP_07772505.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|312978495|ref|ZP_07790233.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
 gi|29344592|gb|AAO82350.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecalis V583]
 gi|227176760|gb|EEI57732.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter protein [Enterococcus faecalis
           HH22]
 gi|229305475|gb|EEN71471.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis ATCC 29200]
 gi|255962970|gb|EET95446.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255967878|gb|EET98500.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T2]
 gi|256596377|gb|EEU15553.1| OpuABC [Enterococcus faecalis ATCC 4200]
 gi|256684525|gb|EEU24220.1| OpuABC [Enterococcus faecalis T3]
 gi|256948372|gb|EEU65004.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis DS5]
 gi|256951622|gb|EEU68254.1| OpuABC [Enterococcus faecalis Merz96]
 gi|256987843|gb|EEU75145.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis JH1]
 gi|256989871|gb|EEU77173.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           E1Sol]
 gi|256995648|gb|EEU82950.1| ABC transporter permease [Enterococcus faecalis D6]
 gi|256999589|gb|EEU86109.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           CH188]
 gi|257161868|gb|EEU91828.1| ABC betaine transporter permease and substrate binding protein
           [Enterococcus faecalis T11]
 gi|257163605|gb|EEU93565.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis
           X98]
 gi|291078552|gb|EFE15916.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis R712]
 gi|291083720|gb|EFE20683.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Enterococcus faecalis S613]
 gi|294451491|gb|EFG19951.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|295113609|emb|CBL32246.1| ABC-type proline/glycine betaine transport system, permease
           component [Enterococcus sp. 7L76]
 gi|300849999|gb|EFK77749.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|306501277|gb|EFM70580.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|306502738|gb|EFM72003.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|306506521|gb|EFM75680.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|306512958|gb|EFM81599.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|310626068|gb|EFQ09351.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|310628506|gb|EFQ11789.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|310634078|gb|EFQ17361.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|311288644|gb|EFQ67200.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
 gi|315025224|gb|EFT37156.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2137]
 gi|315032769|gb|EFT44701.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0017]
 gi|315035772|gb|EFT47704.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0027]
 gi|315143732|gb|EFT87748.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2141]
 gi|315151935|gb|EFT95951.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0031]
 gi|315155518|gb|EFT99534.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0043]
 gi|315159185|gb|EFU03202.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0312]
 gi|315162244|gb|EFU06261.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0645]
 gi|315164936|gb|EFU08953.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1302]
 gi|315168629|gb|EFU12646.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1341]
 gi|315170114|gb|EFU14131.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1342]
 gi|315173750|gb|EFU17767.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1346]
 gi|315576241|gb|EFU88432.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309B]
 gi|315579182|gb|EFU91373.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0630]
 gi|315582957|gb|EFU95148.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309A]
 gi|323481572|gb|ADX81011.1| betaine ABC transporter permease and substrate binding protein
           [Enterococcus faecalis 62]
 gi|327535867|gb|AEA94701.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Enterococcus faecalis OG1RF]
 gi|329577362|gb|EGG58818.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TX1467]
          Length = 569

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|312900011|ref|ZP_07759329.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
 gi|311293007|gb|EFQ71563.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
          Length = 569

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|257084383|ref|ZP_05578744.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1]
 gi|256992413|gb|EEU79715.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1]
          Length = 569

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|256963755|ref|ZP_05567926.1| OpuABC [Enterococcus faecalis HIP11704]
 gi|307271702|ref|ZP_07552973.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
 gi|256954251|gb|EEU70883.1| OpuABC [Enterococcus faecalis HIP11704]
 gi|306511580|gb|EFM80579.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
          Length = 569

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSIMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|256853947|ref|ZP_05559312.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T8]
 gi|307290350|ref|ZP_07570265.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|256710890|gb|EEU25933.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T8]
 gi|306498543|gb|EFM68045.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|315030307|gb|EFT42239.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4000]
          Length = 569

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|329905904|ref|ZP_08274285.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547435|gb|EGF32258.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 307

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 109 IGWNILASLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWLPIGL 168

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 169 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKIL 224

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +
Sbjct: 225 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 271



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 90/221 (40%), Gaps = 18/221 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ +          + + +  +  PI+ +++ +  L +L
Sbjct: 105 NDQGIGWNILASLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWL 164

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        AAI++IF   +W M  +    +  +P+D   V+R   LS 
Sbjct: 165 PIGLLVFKAADP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSE 216

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+    +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       
Sbjct: 217 WKVLTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 270

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           ++  I+ A++ +  V  + +Q     ++  +  F  E    
Sbjct: 271 NVPHIIIAIVVIGVVGLILEQA----LVALARAFTYEDAGS 307


>gi|207742226|ref|YP_002258618.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206593614|emb|CAQ60541.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 287

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 17/262 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY- 373
                R       ++         +  + W  +   +       + W++   +     Y 
Sbjct: 24  ARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYR 83

Query: 374 --QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   V W    ++ RV     +A+++ IP G  +G    +++   P   LL      
Sbjct: 84  NGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPL 143

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + P+ +        + N      +   + W ++ N   G +  P D+  VA   +++ W
Sbjct: 144 AWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEW 199

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ +      
Sbjct: 200 KIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLK 253

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              +V+ + ++    L L + L
Sbjct: 254 VEHIVIAIFVIGVVGLLLEQAL 275



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP       FVL    I + +  +       +  V            +   +      
Sbjct: 38  KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 97

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 98  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 264 IGVVGLLLEQALL 276


>gi|315149978|gb|EFT93994.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0012]
          Length = 569

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|315148611|gb|EFT92627.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4244]
          Length = 569

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|83590806|ref|YP_430815.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573720|gb|ABC20272.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 261

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++FR     ++A+++ IP+G+ +G+   +   + P  Q+L       + PLV      
Sbjct: 59  AVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +++   + + IL   IA        + +VA +F  +G      +I+P  F
Sbjct: 119 GDL----PAIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWRVIVPAAF 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY   G   A G AW   +  E+          +GLG  I ++        V+ G+L++ 
Sbjct: 175 PYITMGLHFALGTAWIFLVAGEMMG------VRSGLGFLIIDARNSMDTGLVIAGMLVIG 228

Query: 564 CFVLALNRFL 573
              LA++R  
Sbjct: 229 LLGLAIDRLF 238



 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R F ++  L   + +  +        +     P D++  +   L    L ++ + +  R 
Sbjct: 6   RFFLSLAGLAGALTLWQVFAWTGLYPRYLFPWPGDVLQSLSQQLHQGVLGEHIAVSLFRF 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            S  +++ +       L   SRRL + + P++ +++ I  + +L    ++F         
Sbjct: 66  FSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGIG------ 119

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L AI  IF +  + +      ++ N+     +V+++F  SG    W + VP + P +
Sbjct: 120 --DLPAIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWRVIVPAAFPYI 177

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  ++   W F+VA EM+ V        G+G  I  A    D   ++  ML +  + 
Sbjct: 178 TMGLHFALGTAWIFLVAGEMMGV------RSGLGFLIIDARNSMDTGLVIAGMLVIGLLG 231

Query: 253 FLYDQLL 259
              D+L 
Sbjct: 232 LAIDRLF 238


>gi|71906470|ref|YP_284057.1| nitrate transport permease [Dechloromonas aromatica RCB]
 gi|71846091|gb|AAZ45587.1| Nitrate transport permease [Dechloromonas aromatica RCB]
          Length = 312

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 20/255 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQY 64
             R I P +  ++  + +  I  +    I       D   ++          +   +   
Sbjct: 60  FGRAILPPVLGMVVLIGIWFIATMKGGSIPGPLQTWDAATVLFADPFYRNGPNDQGIGWN 119

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+      + L       +  +S  L  ++ PI+ +++ +  L +L   ++ F 
Sbjct: 120 VLSSLQRVGIGFGFAALVGIPLGFILGRSAFLSAMINPIISLLRPVSPLAWLPIGLLVFK 179

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA + IF   +W M  +  Q +  +P+D   V+R   LS W+    + 
Sbjct: 180 KADP--------AATYTIFICSIWPMIMNTAQGVQRVPQDYLNVARVLALSEWKVVTKIL 231

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P  +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A
Sbjct: 232 FPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLKVEHIIIA 285

Query: 245 MLTMLGVIFLYDQLL 259
           +  +  V  + +Q L
Sbjct: 286 IFVIGIVGLILEQAL 300



 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            W +   +     Y    +   + W    ++ RV +    A+++ IP+G  +G    +S+
Sbjct: 94  TWDAATVLFADPFYRNGPNDQGIGWNVLSSLQRVGIGFGFAALVGIPLGFILGRSAFLSA 153

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I P   LL       + P+ +          +   +  +   + W ++ N   G    P
Sbjct: 154 MINPIISLLRPVSPLAWLPIGLLVFK----KADPAATYTIFICSIWPMIMNTAQGVQRVP 209

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++ W+    I+ P + PY +TG   + G AW   + +E+ + G      
Sbjct: 210 QDYLNVARVLALSEWKVVTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGG------ 263

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+G ++ +         +++ + ++    L L + L
Sbjct: 264 VGIGFWVWDEWNNLKVEHIIIAIFVIGIVGLILEQAL 300


>gi|218672619|ref|ZP_03522288.1| nitrate ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 246

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   +  +S      L PI  +++++P L +L  +
Sbjct: 47  GLGWRVLVSLQRVAYGFGLAAVTGIIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 106

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+ ++ 
Sbjct: 107 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 158

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 159 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLS 212

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A+  +  V F+ D+L+
Sbjct: 213 DIIVALAYIGIVGFVLDKLV 232



 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           ++  I Y   ++  QD+  + W   +++ RV     +A++  I +G  IG        + 
Sbjct: 30  SYDLIAYPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVTGIIIGAIIGQSVWAMRGLD 88

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  Q+L   P   + PL ++       + N     ++   + W ++ N   G    P D+
Sbjct: 89  PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 144

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           + VA    +  + ++  I+LP   PY  TG     G +W A + +E+ + G       G+
Sbjct: 145 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 198

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G +I ++       ++++ +  +      L++ +
Sbjct: 199 GFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232


>gi|323694649|ref|ZP_08108813.1| ABC transporter permease [Clostridium symbiosum WAL-14673]
 gi|323501289|gb|EGB17187.1| ABC transporter permease [Clostridium symbiosum WAL-14673]
          Length = 613

 Score =  146 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +   I +L+ + L+I I+    + +        I  I+   +    L      T   +L+
Sbjct: 369 VLNAILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLA 428

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++VISLL       + + S R  +++ PILD MQ++P+  +L   V++F       VI  
Sbjct: 429 SVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIAT 488

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + AI  +               +  +  ++ E +RSF  + WQ  + + +P ++P ++ 
Sbjct: 489 TIYAIVPVIRL--------TSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILT 540

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++      VV   MI          G+G  + +++   ++   L A   ++ V  L
Sbjct: 541 GVNQTLMMAMAMVVTCSMI-------GASGLGMEVLISVNRIEIGRGLLAGTAVVIVAIL 593

Query: 255 YDQL 258
            D+L
Sbjct: 594 MDRL 597



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIII 396
           +L++  + ++  +     ++  G + N   Y  +L+++       L   T+  V+  ++I
Sbjct: 373 ILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLASVVI 432

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I +PVGI I      +  ++P    +   P  V+    V           +  ++  
Sbjct: 433 SLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATTIYA 492

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      ++     G      +  E A SF  T W+    + +P   P  +TG       
Sbjct: 493 IV----PVIRLTSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILTGVNQTLMM 548

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A    +   +          +GLG  +  S  +      +L    +    + ++R 
Sbjct: 549 AMAMVVTCSMIG-------ASGLGMEVLISVNRIEIGRGLLAGTAVVIVAILMDRL 597


>gi|170076486|ref|YP_001733125.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Synechococcus sp. PCC 7002]
 gi|169887348|gb|ACB01056.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Synechococcus sp. PCC 7002]
          Length = 279

 Score =  146 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++  I+ +++ IPVGIWIG   +    I P  Q+L      V+ P+ +S         
Sbjct: 91  RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSIF----NGA 146

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 ++   + W  + N   G +  P D+ EVA    +  W+    +ILP   PY  T
Sbjct: 147 EPSAIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIFT 206

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G AW   +  E+ + G       G+G ++ +   + +   V L V ++    L 
Sbjct: 207 GLRISMGVAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVFVIGITGLI 260

Query: 569 LN 570
           L+
Sbjct: 261 LD 262



 Score =  143 bits (362), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 14/189 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++   ++  L           SR   + + PI+ I++ +  L +L   +  F       
Sbjct: 91  RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSIFN------ 144

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             GAE +AIF IF + +W+   +  + +  +PRD  EV+R   +  W++ W + +P S+P
Sbjct: 145 --GAEPSAIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLP 202

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + +SM   W  +VA EM+  G       GIG ++       ++ ++  A+  +  
Sbjct: 203 YIFTGLRISMGVAWLVIVAVEMLTGGI------GIGFFVWDEWNRLNVSSVFLAVFVIGI 256

Query: 251 VIFLYDQLL 259
              + D  L
Sbjct: 257 TGLILDSAL 265


>gi|2642138|gb|AAB86903.1| nitrate transporter component [Klebsiella oxytoca]
          Length = 294

 Score =  146 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A++  IP+G  IG     +    P   LL       +
Sbjct: 93  PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPEDYLNVARVLQLSEWTV 208

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       + 
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261



 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 14/179 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +S     +  P++ +++ +  L +L   
Sbjct: 97  GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP D   V+R  +LS W  
Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPEDYLNVARVLQLSEWTV 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261


>gi|323487142|ref|ZP_08092449.1| ABC transporter permease [Clostridium symbiosum WAL-14163]
 gi|323399545|gb|EGA91936.1| ABC transporter permease [Clostridium symbiosum WAL-14163]
          Length = 625

 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +   I +L+ + L+I I+    + +        I  I+   +    L      T   +L+
Sbjct: 381 VLNAILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLA 440

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++VISLL       + + S R  +++ PILD MQ++P+  +L   V++F       VI  
Sbjct: 441 SVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIAT 500

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + AI  +               +  +  ++ E +RSF  + WQ  + + +P ++P ++ 
Sbjct: 501 TIYAIVPVIRL--------TSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILT 552

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++      VV   MI          G+G  + +++   ++   L A   ++ V  L
Sbjct: 553 GVNQTLMMAMAMVVTCSMI-------GASGLGMEVLISVNRIEIGRGLLAGTAVVIVAIL 605

Query: 255 YDQL 258
            D+L
Sbjct: 606 MDRL 609



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIII 396
           +L++  + ++  +     ++  G + N   Y  +L+++       L   T+  V+  ++I
Sbjct: 385 ILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLASVVI 444

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I +PVGI I      +  ++P    +   P  V+    V           +  ++  
Sbjct: 445 SLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATTIYA 504

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      ++     G      +  E A SF  T W+    + +P   P  +TG       
Sbjct: 505 IV----PVIRLTSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILTGVNQTLMM 560

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A    +   +          +GLG  +  S  +      +L    +    + ++R 
Sbjct: 561 AMAMVVTCSMIG-------ASGLGMEVLISVNRIEIGRGLLAGTAVVIVAILMDRL 609


>gi|209552027|ref|YP_002283943.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539620|gb|ACI59551.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 660

 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 97/568 (17%), Positives = 197/568 (34%), Gaps = 50/568 (8%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
                  +  +LV  ++   + G     +           L V  L   A  T   +L  
Sbjct: 108 LAPPLSWVGVILVTALVAWRISGRSLAILTLAAG----AYLVVFGLWVSAMITLASVLLC 163

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++  L         A +S      L  +++IMQ++PI  +L  T++ F            
Sbjct: 164 VITGLALGLAMGIWAYRSPGAEAGLRAVMNIMQTVPIFSYLLPTLLLFGYG--------P 215

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AA+FA     +  M  +   +L ++P +  E++R    S  Q  W + +P +MP L   
Sbjct: 216 SAALFATVVYALPPMVHATVLALRSVPSETLELARMTGCSRTQTLWKVELPVAMPQLAIG 275

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +   +      V+ + MI  G       G+G  +  A++  D  A   A + ++ +  + 
Sbjct: 276 LNQVVMMTLNMVIIASMIGAG-------GLGYDVLRALRRLDFGAGFEAGMGIVALAVVL 328

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL----------FRKTNFLRFIGYSSWNF 305
           D+L        + + +      ++     +L L          F       +    +   
Sbjct: 329 DRL-----TQAAARNQSTGRHRLWRPRDSILALSLLVVPTVVSFAVPALAAWPTGWTLTT 383

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI----AW 361
               +  V  + +T            L    N     +    W  VV  +A+        
Sbjct: 384 APFWNGAVSFINQTFYGPLEAMRTAMLLGVMNPFRDLLQSAPWSVVVLLLAMTAYALGGL 443

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++   ++    +  V         +++  V+ + IA  I +P+GIW+   P +   +Q  
Sbjct: 444 RTTAVVMLLILFIVVTGYWEAAMASVYLTVLSVAIALAIGLPLGIWVAGHPRLHGPVQLA 503

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P  V+    V        +  + ++   I     Y     +AG +  P++  E
Sbjct: 504 LDTLQTLPTLVYLLPAVMLFRNGDFSALIAIASYAIAPAVRY----GMAGMAHVPHERIE 559

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
                  T W+ +R+I LP   P  + G       A +  +++ +            LG 
Sbjct: 560 AGLMSGCTPWQTFRFISLPSALPTLILGVNQTVMMALSMLVIAALVGTRE-------LGQ 612

Query: 542 YIAESTEKGSF-PEVVLGVLIMCCFVLA 568
            +  +  +G   P ++ G+ + C  ++A
Sbjct: 613 EVYTALARGQTGPGIIAGLCVACIALIA 640



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 86/288 (29%), Gaps = 16/288 (5%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           R  N+            +  +  +  +     +       +     +     ++     +
Sbjct: 55  RAMNWFARDAAIGQVKIADATRALAAVAEMPILWLKMLLVDGWVKGAGFNKVHLAPPLSW 114

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWI 408
             V  V   +AW+  G  +   T     Y++  G  ++    +  +++  I  + +G+ +
Sbjct: 115 VGVILVTALVAWRISGRSLAILTLAAGAYLVVFGLWVSAMITLASVLLCVITGLALGLAM 174

Query: 409 G----FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G      P   + ++    ++   P   +    +    Y             +      +
Sbjct: 175 GIWAYRSPGAEAGLRAVMNIMQTVPIFSYLLPTLLLFGYGPS----AALFATVVYALPPM 230

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +   +    + P++  E+A     +  +    + LP   P    G         N  I++
Sbjct: 231 VHATVLALRSVPSETLELARMTGCSRTQTLWKVELPVAMPQLAIGLNQVVMMTLNMVIIA 290

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +  +  +  F       + +    + L+R 
Sbjct: 291 SMIGAG-------GLGYDVLRALRRLDFGAGFEAGMGIVALAVVLDRL 331


>gi|89901332|ref|YP_523803.1| nitrate transport permease [Rhodoferax ferrireducens T118]
 gi|89346069|gb|ABD70272.1| nitrate transport permease [Rhodoferax ferrireducens T118]
          Length = 314

 Score =  146 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 18/261 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-- 378
               + +   +L +        ++   W  V    A  I   S  +      + D  Y  
Sbjct: 50  SAPPYDWRGLWLAVLPPVLGLALMIGVWALVSISTASSIPSPSETFKQAVIIFSDPFYRK 109

Query: 379 ------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 V W   +++ RV V   +A+ + IP G  IG    +S    P   LL       
Sbjct: 110 GPNDQGVGWNILMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLA 169

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+ +          N      +   + W ++ N   G    P D+  VA   +++ W+
Sbjct: 170 WLPIGLLVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWK 225

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I+ P + PY +TG   A G AW   + +E+ + G       G+G ++ +     + 
Sbjct: 226 IVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNV 279

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             +++ + ++    L L   L
Sbjct: 280 KNIIIAIFVIGIVGLMLEYAL 300



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 25/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---------HSLPQYA 65
           + P +  L   + V  +++I          P +      I               +    
Sbjct: 63  VLPPVLGLALMIGVWALVSIST--ASSIPSPSETFKQAVIIFSDPFYRKGPNDQGVGWNI 120

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+     ++         +  +   L  +  P++ +++ +  L +L   ++ F  
Sbjct: 121 LMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLAWLPIGLLVFKG 180

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    +  
Sbjct: 181 ANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILF 232

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+ A+
Sbjct: 233 PSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNIIIAI 286

Query: 246 LTMLGVIFLYDQLLFRPMIVWS 267
             +  V  + +  L +    ++
Sbjct: 287 FVIGIVGLMLEYALIKIATAFT 308


>gi|157371148|ref|YP_001479137.1| nitrate ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322912|gb|ABV42009.1| nitrate ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 298

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 17/275 (6%)

Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
           +  L  +                PL   V  L +          + F +         + 
Sbjct: 1   MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLT 60

Query: 345 DIFWFCVVCGV----AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIA 397
            + W                WQ+   +     Y    +   + W    ++ RV     +A
Sbjct: 61  LVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLA 120

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ IP G  +G    +++ + P   LL       + P+ +                 + 
Sbjct: 121 ALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWT----IF 176

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + W ++ N   G +  P D+  VA    ++ W   R I+ P + PY +TG   + G A
Sbjct: 177 ICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIA 236

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           W   + +E+ + G       G+G +I       + 
Sbjct: 237 WLVIVAAEMLTGG------VGIGFWIWNEWNNLNV 265



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 88/232 (37%), Gaps = 20/232 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           RR  P    L+  ++V  +  +            +  +            +   +     
Sbjct: 48  RRGVPAALGLVLTLVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVL 107

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+ +   ++ L       L  +   L  +L PI+ +++ +  L +L   ++ F   
Sbjct: 108 ASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRA 167

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W     +  P
Sbjct: 168 EP--------ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFP 219

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 220 AVLPYVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNV 265


>gi|17545099|ref|NP_518501.1| nitrate transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17427389|emb|CAD13908.1| putative nitrate transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 287

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 97/260 (37%), Gaps = 17/260 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY--- 373
              R       ++         +  + W  +   +       + W++   +     Y   
Sbjct: 26  PAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADPFYRNG 85

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   V W    ++ RV     +A++I IP G  +G    +++   P   LL       +
Sbjct: 86  PNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAW 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        + N      +   + W ++ N   G +  P D+  VA   +++ W+ 
Sbjct: 146 LPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKI 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ +        
Sbjct: 202 FTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVE 255

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +V+ + ++    L L + L
Sbjct: 256 HIVIAIFVIGVVGLLLEQAL 275



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP +     FVL    I + +  +       +  V            +   +      
Sbjct: 38  KGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADPFYRNGPNDQGVGWNVLS 97

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 98  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 264 IGVVGLLLEQALL 276


>gi|218248421|ref|YP_002373792.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|257061488|ref|YP_003139376.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC
           8802]
 gi|218168899|gb|ACK67636.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8801]
 gi|256591654|gb|ACV02541.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC
           8802]
          Length = 280

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 12/234 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVVVLIIIASI 399
           + +   +   +    +    ++  YI++ F       L + WL   ++ RV +  ++ + 
Sbjct: 40  WWIIALFRHEMMPTPLEALTKNWDYILHPFYVRGPGDLGIGWLLLASLRRVSIGFLLGAA 99

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG+ IG        I P  Q+L       + P+ ++  +    +       ++   
Sbjct: 100 VAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAMFNLAEPS----AIFVIFIT 155

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + W  + N   G ++ P D+ EV+    +   R    IILP   PY  TG   + G AW 
Sbjct: 156 SLWSTIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIILPASLPYIFTGLRISLGIAWL 215

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  E+ + G       G+G ++ +   + +   V L VL++    L L+  L
Sbjct: 216 VIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVLVIGLTGLVLDYIL 263



 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 87/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+    ++          L   SR   +++ PI+ +++ +  L +L   
Sbjct: 78  GIGWLLLASLRRVSIGFLLGAAVAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIA 137

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F    P        +AIF IF + +W+   +    + ++PRD  EVS+   ++  ++
Sbjct: 138 LAMFNLAEP--------SAIFVIFITSLWSTIINTALGVASVPRDYLEVSQVLEMNHRRR 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P S+P +   + +S+   W  +VA EM+  G       GIG ++       ++ 
Sbjct: 190 IWKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGGI------GIGFFVWDEWNRLNVS 243

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           ++  A+L +     + D +L
Sbjct: 244 SVFLAVLVIGLTGLVLDYIL 263


>gi|319784812|ref|YP_004144288.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170700|gb|ADV14238.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 660

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/527 (14%), Positives = 163/527 (30%), Gaps = 45/527 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +  A+   ++        A +       ++ P LD+MQ+IP   +L   ++ F
Sbjct: 149 AMLTLGLISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 208

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N        + ++A+ A        M  +    L  +P ++++ S     +  QK W +
Sbjct: 209 GN--------SPVSAMIATAIFATPPMVRATMLGLSRVPSEIDDFSEMAGCTARQKLWRV 260

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P L+  +   +      V+ + MI  G       G+G  + LA++   +   + 
Sbjct: 261 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 313

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-----IYPADSWVLYLFRKTNFLRFI 298
           A L ++ +    D+L  + +     K  + +         YP  +  + +   T  L   
Sbjct: 314 AGLAIVALAIALDRL-SQAIAHSQAKGHVHQEVSPSLWRRYPNLTLAIAILVVTTLLGLF 372

Query: 299 GYSSWNFFSPLSNNVKKLCR------------TLGVIRFHFPENFLQLCSNQRVSYMLDI 346
             +       ++     L +            T+   R     N L         +    
Sbjct: 373 VPALAVVPKAITFTTAPLWKAAVNWVTINFFDTIEAFRVALILNLLNPLRAFCEGFPWLG 432

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
             F +          +    +     +  +  +      T++   +   IA +I IP+G+
Sbjct: 433 AVFLLGLAGYQLSGLRLAVLVAALTAFCAITGLWEKTMATVYLCGISAFIACLIGIPIGL 492

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      + P    L   P+  F   VV       +   +      +     Y   
Sbjct: 493 MASRSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY--- 549

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G    P    E A     T  + +  + LP   P  + G       A    I+  +
Sbjct: 550 -TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIIICAM 608

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                       LG  +  +  K      ++  L +    +  +R  
Sbjct: 609 VGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 648



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 99/258 (38%), Gaps = 23/258 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R F   F  L  V ++G+    L G++       +V  +     +  L +    T     
Sbjct: 422 RAFCEGFPWLGAVFLLGLAGYQLSGLRLAV----LVAALTAFCAITGLWEKTMATVYLCG 477

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +  I+ L       +A++S R   ++ P++D +Q +P   F+   V+ F          
Sbjct: 478 ISAFIACLIGIPIGLMASRSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVG------- 530

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ A+ A     V          +  +P  L E ++    +  Q F+ + +P ++P ++
Sbjct: 531 -DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIM 589

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      ++   M+   D       +G  + +A+ + D    + A L +  +  
Sbjct: 590 LGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGI 642

Query: 254 LYDQLLFRPMIVWSNKFR 271
           + D+L       W+ K R
Sbjct: 643 VADRL----FSAWTAKAR 656



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 93/287 (32%), Gaps = 23/287 (8%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
           +          + +N+  L R++  V+          L  N ++ +  + +    +  V 
Sbjct: 53  VADWVSALMRWIKSNLSWLTRSITAVLGVPLDFALNLLAKNFKIGHGAEAYVLPRLSWVG 112

Query: 357 IGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF---- 410
           +  A    G+         ++    +++     +   +L +    I +P  I  G     
Sbjct: 113 VCAAAFITGHAAGGRKLSLLVGGCFLYIALFGQWTSAMLTLGLISIAVPFCIVTGLFAGI 172

Query: 411 ----RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
               +P     I  P   L+   P   +   ++       ++  +  ++         ++
Sbjct: 173 WAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPPMV 228

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              + G S  P++  + +     T  +    ++LP   P  + G       A N  I++ 
Sbjct: 229 RATMLGLSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIAS 288

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  +  +       E +   L +    +AL+R 
Sbjct: 289 MIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 328


>gi|288549732|ref|ZP_05967996.2| nitrate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318071|gb|EFC57009.1| nitrate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 256

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A+I  IP+G  IG     S    P   LL       +
Sbjct: 55  PNDMGIGWNVLASLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAW 114

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 115 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 170

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       +  
Sbjct: 171 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 224

Query: 554 EVVLGVLIMCCFVLALN 570
            +++ ++I+    L L 
Sbjct: 225 NILIAIVIIGVVGLMLE 241



 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 101/266 (37%), Gaps = 24/266 (9%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66
           +RI P    L   V++  +  I   G        D    +          +   +     
Sbjct: 6   QRIIPAFLGLGLMVVLWQLAAINSKGFPTPLSTLDSALTLFADPFYRDGPNDMGIGWNVL 65

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ +       L  +      +  P++ +++ +  L +L   ++ F   
Sbjct: 66  ASLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLPIGLLLFQKA 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W     +  P
Sbjct: 126 EP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFP 177

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A++
Sbjct: 178 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVENILIAIV 231

Query: 247 TMLGVIFLYDQ---LLFRPMIVWSNK 269
            +  V  + +Q   L+ R    W  K
Sbjct: 232 IIGVVGLMLEQGLMLIARRF-SWQEK 256


>gi|326797081|ref|YP_004314901.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547845|gb|ADZ93065.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 323

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 16/216 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    Y            +++ VV   ++AS+I IP GI IG    + S   P  Q+   
Sbjct: 98  IKVRPYTGKPTFFDQIGTSLYTVVAGFVLASLIAIPGGIIIGLSSSVYSAFNPLIQIFKP 157

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480
                + PLV   VS  +++ +   S         +     W  L N   G +A   D  
Sbjct: 158 VSPLAWLPLVTMVVSAAYVSKDPMFSKSFLTSMFTVTLCCLWPTLINTAVGVAAIEKDLL 217

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V+    +  +     I++P   P   TG   + G AW   I +E+ +      +  GLG
Sbjct: 218 NVSKVLRLGWFTHVIKIVIPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 271

Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573
            ++ +  + G   S   ++  V+++      L+R +
Sbjct: 272 KFVWDEFQNGSSNSLGRIMASVIVIGLIGFLLDRTM 307



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 86/207 (41%), Gaps = 14/207 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +++  V++ L       +   S  +     P++ I + +  L +L    +     Y
Sbjct: 116 SLYTVVAGFVLASLIAIPGGIIIGLSSSVYSAFNPLIQIFKPVSPLAWLPLVTMVVSAAY 175

Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             K      + L ++F +    +W    +    +  I +DL  VS+  RL  +     + 
Sbjct: 176 VSKDPMFSKSFLTSMFTVTLCCLWPTLINTAVGVAAIEKDLLNVSKVLRLGWFTHVIKIV 235

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241
           +P S+P +   + +S+   W  ++A+EM+         PG+G ++    +      L  I
Sbjct: 236 IPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 289

Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266
           + +++ +  + FL D+ +   + M+ W
Sbjct: 290 MASVIVIGLIGFLLDRTMLSIQKMVSW 316


>gi|227519676|ref|ZP_03949725.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX0104]
 gi|227072900|gb|EEI10863.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecalis TX0104]
          Length = 569

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L + VIS++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 85  QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P +L E + S+  +GWQ
Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                  + ++ +  + D+ 
Sbjct: 250 GNGFVNGVALVILAIIIDRF 269



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L++    L   L  I     +N   L +      ++ +           
Sbjct: 8   VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I      +I   F Y   L+   +  +T+  V++  +I+ II +P+GI +       S 
Sbjct: 68  KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +   P  V+    V+      +       +          +     G    PN
Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E A S+  TGW+    + LP      + G       A +  +++ +           
Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269


>gi|225571297|ref|ZP_03780293.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM
           15053]
 gi|225159773|gb|EEG72392.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM
           15053]
          Length = 619

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 96/233 (41%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L + ++ +    ++       +  ++   + V         T   +L+++V++LLF   
Sbjct: 384 FLFLILVFLAGWRVRRKLQSGILYAVILCLVGVVGFWDEMILTLSIVLASVVLALLFGLP 443

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L + S R   ++ PILD MQ++P+  +L   ++ F             +A+ A    
Sbjct: 444 VGILISNSPRANRIVRPILDTMQTMPVFVYLIPALLLFGLG--------NASAVIATVIY 495

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  ++ E +RSF  + WQ  + + +P ++P ++  +  ++     
Sbjct: 496 AIVPVIRLTSLGIRQVDTEVVEAARSFGSTRWQTLFKVQIPQAIPTIMTGVNQTLMMAMA 555

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV   MI          G+G  +  A+   ++   L A   ++ +  + D+L
Sbjct: 556 MVVTCSMI-------GARGLGMEVLNAVNRTEIGRGLVAGGCVVILAVVLDRL 601



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 91/273 (33%), Gaps = 19/273 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS--YMLDIFWFCVVCGVAIGIAWQSIG 365
           P ++ +    R+  V      E    L         ++L+   + +   +     W+   
Sbjct: 340 PNTDAIDGAVRSFAVSAAPVLEKIQSLLGGMVNGFKWLLEHIPWFLFLILVFLAGWRVRR 399

Query: 366 YIVNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            + +   Y  +L ++ +        +T+  V+  +++A +  +PVGI I   P  +  ++
Sbjct: 400 KLQSGILYAVILCLVGVVGFWDEMILTLSIVLASVVLALLFGLPVGILISNSPRANRIVR 459

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P    +   P  V+    +      + +  +   +  I      ++     G      + 
Sbjct: 460 PILDTMQTMPVFVYLIPALLLFGLGNASAVIATVIYAIV----PVIRLTSLGIRQVDTEV 515

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A SF  T W+    + +P   P  +TG       A    +   +           GL
Sbjct: 516 VEAARSFGSTRWQTLFKVQIPQAIPTIMTGVNQTLMMAMAMVVTCSMIG-------ARGL 568

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +  +  +      ++    +    + L+R 
Sbjct: 569 GMEVLNAVNRTEIGRGLVAGGCVVILAVVLDRL 601


>gi|325289658|ref|YP_004265839.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324965059|gb|ADY55838.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 271

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++ RV+    +A ++ I +G+ IG    ++       QLL   P   + PL
Sbjct: 68  GQLAKHVGISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPL 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +       L+  G  + IL NV  G         EV+     + WR+   
Sbjct: 128 AIIWFGVEEESK----IFLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFR 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++PG  P  +TG     G AW   + +E+ +         G+G  I ++ +      V+
Sbjct: 184 LVIPGALPSIMTGLRIGIGSAWLCVVAAELIA------ADRGIGYMIMDARQLLQTDLVI 237

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++ +      ++  L
Sbjct: 238 VGMITIGLIGKIMDTLL 254



 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  ++V  +++ + +        P  + +     +    L ++   + LR+L    ++++
Sbjct: 31  LLILVVWKVLSDLQVINPVALPSPEKVAESFYTMILNGQLAKHVGISILRVLEGYSLAVV 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V       SR L  +    + +++ IP + ++   +++F           E + IF 
Sbjct: 91  LGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPLAIIWFGVE--------EESKIFL 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF    + +  ++   +    + L EVS+    S W+  + L +P ++P ++  + + + 
Sbjct: 143 IFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFRLVIPGALPSIMTGLRIGIG 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  VVA+E+I          GIG  I  A +      ++  M+T+  +  + D LL +
Sbjct: 203 SAWLCVVAAELIA------ADRGIGYMIMDARQLLQTDLVIVGMITIGLIGKIMDTLLKQ 256

Query: 262 ---PMIVWSNKFRLE 273
               +I W   ++ +
Sbjct: 257 LEFVLIRWKVNYQGD 271


>gi|300705265|ref|YP_003746868.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299072929|emb|CBJ44285.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957]
          Length = 283

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 100/273 (36%), Gaps = 17/273 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQS 363
           P + +           R       ++         +  + W  +   +       + W++
Sbjct: 9   PDARSGAGSVPARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKA 68

Query: 364 IGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
              +     Y    +   V W    ++ RV     +A+++ IP G  +G    +++   P
Sbjct: 69  AVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              LL       + P+ +        + N      +   + W ++ N   G +  P D+ 
Sbjct: 129 IISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            VA   +++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G       G+G
Sbjct: 185 NVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIG 238

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +         +V+ + ++    L L + L
Sbjct: 239 FWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP       FVL    I + +  +       +  V            +   +      
Sbjct: 34  KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 260 IGVVGLLLEQALL 272


>gi|152970769|ref|YP_001335878.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895282|ref|YP_002920017.1| nitrate transporter component [Klebsiella pneumoniae NTUH-K2044]
 gi|330009851|ref|ZP_08306609.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955618|gb|ABR77648.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238547599|dbj|BAH63950.1| nitrate transporter component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534712|gb|EGF61275.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 294

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A++  IP+G  IG     +    P   LL       +
Sbjct: 93  PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       + 
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261



 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +S     +  P++ +++ +  L +L   
Sbjct: 97  GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261


>gi|13476102|ref|NP_107672.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
 gi|14026862|dbj|BAB53458.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
          Length = 659

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 82/530 (15%), Positives = 159/530 (30%), Gaps = 51/530 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +  A+   ++        A +       ++ P LD+MQ+IP   +L   ++ F
Sbjct: 148 AMLTLALISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 207

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N        + ++A+ A        M  +    L  +P ++ E S     +  QK W +
Sbjct: 208 GN--------SPVSAMIATAIFATPPMVRATMLGLTRVPLEIGEFSDMAGCTARQKLWRV 259

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P L+  +   +      V+ + MI  G       G+G  + LA++   +   + 
Sbjct: 260 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 312

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           A L ++ +    D+L        ++K              W  Y             +  
Sbjct: 313 AGLAIVALAIALDRLS----QAIAHKQAKGHVHQAVDPSFWRRYPNLTLAIAILSVTTLL 368

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC---SNQRVSYMLDIFWFCVVCGVAIGIA 360
               P    V K         +    N++ +    + +     L +     V     G  
Sbjct: 369 GLLVPAFAAVPKAITFTTAPLWKAAVNWVTINFFDAIEAFRVALILNVLNPVRAFCEGFP 428

Query: 361 WQSIGYIVNHFTYQDVLYVIWL-----------------GCITMFRVVVLIIIASIIWIP 403
           W    +++    YQ     +                      T++   +   IA +I IP
Sbjct: 429 WLGAVFLLGLAGYQLSGLRLAALVAALTVFCAVTGLWEKTMATVYLCGISAFIACLIGIP 488

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+           + P    L   P+  F   VV       +   +      +     Y
Sbjct: 489 IGLMAARSDRFEKIVTPIIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY 548

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G    P    E A     T  + +  + LP   P  + G       A    I+
Sbjct: 549 ----TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIII 604

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +            LG  +  +  K      ++  L +    +  +R  
Sbjct: 605 CAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 647



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 100/258 (38%), Gaps = 23/258 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R F   F  L  V ++G+    L G++   +    V  + +   V  L +    T     
Sbjct: 421 RAFCEGFPWLGAVFLLGLAGYQLSGLRLAAL----VAALTVFCAVTGLWEKTMATVYLCG 476

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +  I+ L       +AA+S R   ++ PI+D +Q +P   F+   V+ F          
Sbjct: 477 ISAFIACLIGIPIGLMAARSDRFEKIVTPIIDTLQVLPSFCFIIPVVMLFRVG------- 529

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ A+ A     V          +  +P  L E ++    +  Q F+ + +P ++P ++
Sbjct: 530 -DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIM 588

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      ++   M+   D       +G  + +A+ + D    + A L +  +  
Sbjct: 589 LGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGI 641

Query: 254 LYDQLLFRPMIVWSNKFR 271
           + D+L       W+ K R
Sbjct: 642 VADRL----FNAWTAKAR 655



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 21/289 (7%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F  ++        S LS   + +   LG +   F  N L             +      
Sbjct: 51  PFADWVSALMGWIKSNLSWLTRSITAVLG-VPLDFALNLLAKNFKIGHGADAYVLPRLSW 109

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-- 410
            GV                +       +++     +   +L +    I +P  I  G   
Sbjct: 110 VGVCAVAFIAGHAVGGRKLSLLVGGCFLYIALFGQWTSAMLTLALISIAVPFCIVTGLFA 169

Query: 411 ------RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                 +P     I  P   L+   P   +   ++       ++  +  ++         
Sbjct: 170 GIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPP 225

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   + G +  P +  E +     T  +    ++LP   P  + G       A N  I+
Sbjct: 226 MVRATMLGLTRVPLEIGEFSDMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVII 285

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  +       E +   L +    +AL+R 
Sbjct: 286 ASMIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327


>gi|16124864|ref|NP_419428.1| nitrate ABC transporter permease [Caulobacter crescentus CB15]
 gi|221233583|ref|YP_002516019.1| nitrate transport permease protein NrtB [Caulobacter crescentus
           NA1000]
 gi|13421816|gb|AAK22596.1| nitrate ABC transporter, permease protein [Caulobacter crescentus
           CB15]
 gi|220962755|gb|ACL94111.1| nitrate transport permease protein nrtB [Caulobacter crescentus
           NA1000]
          Length = 296

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 23/253 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYAS 66
             P +  +L  + V   I    +     +  +  ++   + L+           L  + +
Sbjct: 45  TLPPLVTVLVILGVWQAIVGESYTGL-PSPKQVWLESKELILNPFYDNGGVDKGLFWHVA 103

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     IS +   +       +R     L PI  +++++P L +L  ++  F   
Sbjct: 104 TSLQRVGIGFSISAVVGVLLGVFVGSNRWAHRSLDPIFQVLRTVPPLAWLPISLAAFHQA 163

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        +A+F IF + +W +  +    + NIP D   V++  RLS  + F+ + +P
Sbjct: 164 QP--------SALFVIFITAIWPIIINTAVGVRNIPSDYVNVAKVLRLSPVEYFFKILLP 215

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P +   + + +   W  +VASEM++ G       GIG +I        +  IL  + 
Sbjct: 216 ATTPYIFTGLRIGIGMSWLAIVASEMLLGGV------GIGFFIWDQYNASRISDILVGLA 269

Query: 247 TMLGVIFLYDQLL 259
            +    F  D+L+
Sbjct: 270 WVGLTGFFLDRLV 282



 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   I++++ + +G+++G        + P  Q+L   P   + P+ +
Sbjct: 98  LFWHVATSLQRVGIGFSISAVVGVLLGVFVGSNRWAHRSLDPIFQVLRTVPPLAWLPISL 157

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +               ++     W I+ N   G    P+D+  VA    ++   ++  I+
Sbjct: 158 AAF----HQAQPSALFVIFITAIWPIIINTAVGVRNIPSDYVNVAKVLRLSPVEYFFKIL 213

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A + SE+   G       G+G +I +        ++++G
Sbjct: 214 LPATTPYIFTGLRIGIGMSWLAIVASEMLLGG------VGIGFFIWDQYNASRISDILVG 267

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 268 LAWVGLTGFFLDRLV 282


>gi|56750321|ref|YP_171022.1| nitrate/nitrite ABC transporter permease [Synechococcus elongatus
           PCC 6301]
 gi|81300047|ref|YP_400255.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|585581|sp|P38044|NRTB_SYNE7 RecName: Full=Nitrate transport permease protein nrtB
 gi|48970|emb|CAA43810.1| nitrate transporter [Synechococcus elongatus PCC 7942]
 gi|56685280|dbj|BAD78502.1| ABC-type nitrate/nitrite transport system permease protein
           [Synechococcus elongatus PCC 6301]
 gi|81168928|gb|ABB57268.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|445046|prf||1908370A nitrate transporter
          Length = 279

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 13/198 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I++ RV +  ++A+   I VG  +G    +   + P  Q+L   P   +FP+ +
Sbjct: 80  LGLQILISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISL 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   + N     ++     W I+ N   G +  P+D+  VA    ++   +   I+
Sbjct: 140 MVFQ----DANTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNIL 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK---GSFPEV 555
           +P   PY   G   A G AW A + +E+           G+G +I ++      GS  ++
Sbjct: 196 IPSTVPYVFAGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDGSSSQI 249

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L +  +    L+L+R +
Sbjct: 250 ILAIFYVGLVGLSLDRLV 267



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 105/259 (40%), Gaps = 26/259 (10%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHG---------IQETTVPRDIVDIVPITLDVHSLPQ 63
           +   P +  L  F+ +  +I+ +L           +  T +P  +            L  
Sbjct: 23  KPFLPYVVCLPIFLAIWQVISAILGQDRLPGPINVVANTWMPYIVEPFFDNGGTSKGLGL 82

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+    +++     +   +   S+ LG  L P++ +++++P L +   +++ F
Sbjct: 83  QILISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMVF 142

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +        A  +AIF IF + +W +  +    +  IP D   V+R  +LS       +
Sbjct: 143 QD--------ANTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNI 194

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLA 240
            +P ++P +   + +++   W  +VA+EM+          GIG +I  A     +     
Sbjct: 195 LIPSTVPYVFAGLRIAVGLAWLAIVAAEML------KADGGIGYFIWDAYNAGGDGSSSQ 248

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+ A+  +  V    D+L+
Sbjct: 249 IILAIFYVGLVGLSLDRLV 267


>gi|159898858|ref|YP_001545105.1| nitrate ABC transporter inner membrane subunit [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891897|gb|ABX04977.1| nitrate ABC transporter, inner membrane subunit [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 282

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 13/237 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIII 396
                   W              ++  +++   Y +      +G     ++ RV     I
Sbjct: 41  AGLWQVAAWISGGTLPTPLATASTLRELLSDPFYDNGPNDKGIGIQLMASLGRVFTGWGI 100

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
              I IP+G+ +G    +   + P  ++L       ++PL ++ +     N    +   +
Sbjct: 101 GIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVL----HNAPKAVVFAI 156

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  + W  L N   G    P D K V+  F  + WR+   ++LP  FP  +TG   + G 
Sbjct: 157 VITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGI 216

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           AW   +  E+ + G      TGLG ++ +S    S   V+  +L++    LAL+R  
Sbjct: 217 AWMVIVAGEMLAGG------TGLGFFVWDSWNALSLERVMSAILVIGITGLALDRLF 267



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 17/207 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+ +   I +        L   S  L  +L P+++I++ +  L +    +    
Sbjct: 87  LMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLH 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N        A  A +FAI  + +W    +    + NIP DL+ VS+ FR S W+    + 
Sbjct: 147 N--------APKAVVFAIVITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVL 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M +SM   W  +VA EM+  G       G+G ++  +     L  ++ A
Sbjct: 199 LPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGT------GLGFFVWDSWNALSLERVMSA 252

Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWSN 268
           +L +       D+   L+ + M  W  
Sbjct: 253 ILVIGITGLALDRLFSLIGQRMAAWQE 279


>gi|241766705|ref|ZP_04764544.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           delafieldii 2AN]
 gi|241362958|gb|EER58652.1| nitrate ABC transporter, inner membrane subunit [Acidovorax
           delafieldii 2AN]
          Length = 316

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 118 VGWNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLPIGL 177

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 178 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTKIL 233

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 234 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 287

Query: 559 VLIMCCFVLALN 570
           + ++    L L 
Sbjct: 288 IFVIGIVGLLLE 299



 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 83/205 (40%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ +          +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 120 WNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLPIGLLV 179

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 180 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTK 231

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 232 ILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 285

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A+  +  V  L +  L +    ++
Sbjct: 286 IAIFVIGIVGLLLEAALVKLATAFT 310


>gi|134093701|ref|YP_001098776.1| nitrate ABC transporter permease [Herminiimonas arsenicoxydans]
 gi|133737604|emb|CAL60647.1| Nitrate transport permease protein nrtB [Herminiimonas
           arsenicoxydans]
          Length = 304

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV V   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 106 IGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGL 165

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +      +   + W ++ N   G    P D+  VA   +++ W+    I+
Sbjct: 166 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKIL 221

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +
Sbjct: 222 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 268



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 22/263 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITL 56
           ++++ P F+S  + P IF +L  VLV  II+    GI    V                  
Sbjct: 44  MFSLRPFFMS--VVPPIFGVLFLVLVWEIISAKNSGIPSPAVTLKSAIDLFADPFYSNGP 101

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       +  + + L  +  PI+ +++ +  L +L
Sbjct: 102 NDQGIGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWL 161

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        AAI++IF   +W M  +    +  +P+D   V+R   LS 
Sbjct: 162 PIGLLVFKAADP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSE 213

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+    +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       
Sbjct: 214 WKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 267

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  I+ A++ +  V  + +Q+L
Sbjct: 268 NVAHIIIAIVVIGIVGLVLEQIL 290


>gi|206577969|ref|YP_002237923.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288934833|ref|YP_003438892.1| nitrate ABC transporter inner membrane protein [Klebsiella
           variicola At-22]
 gi|290508976|ref|ZP_06548347.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206567027|gb|ACI08803.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889542|gb|ADC57860.1| nitrate ABC transporter, inner membrane subunit [Klebsiella
           variicola At-22]
 gi|289778370|gb|EFD86367.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 294

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A++  IP+G  IG     +    P   LL       +
Sbjct: 93  PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       + 
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +S     +  P++ +++ +  L +L   
Sbjct: 97  GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261


>gi|83746841|ref|ZP_00943888.1| NrtB [Ralstonia solanacearum UW551]
 gi|83726426|gb|EAP73557.1| NrtB [Ralstonia solanacearum UW551]
          Length = 283

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 17/262 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY- 373
                R       ++         +  + W  +   +       + W++   +     Y 
Sbjct: 20  ARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYR 79

Query: 374 --QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   V W    ++ RV     +A+++ IP G  +G    +++   P   LL      
Sbjct: 80  NGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPL 139

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + P+ +        + N      +   + W ++ N   G +  P D+  VA   +++ W
Sbjct: 140 AWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEW 195

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +  ++ P + PY +TG   + G AW   + +E+ + G       G+G ++ +      
Sbjct: 196 KIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLK 249

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              +V+ + ++    L L + L
Sbjct: 250 VEHIVIAIFVIGVVGLLLEQAL 271



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP       FVL    I + +  +       +  V            +   +      
Sbjct: 34  KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 260 IGVVGLLLEQALL 272


>gi|171778758|ref|ZP_02919854.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282715|gb|EDT48139.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T   +L A ++S++         AKS R+  ++ PILD MQ++P   +L  
Sbjct: 88  QGLWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  IP +L E + SF  +  Q
Sbjct: 148 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIREIPEELIEAAESFGSTEGQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + + + +P +   ++  +  ++      VV + MI         PG+G+ +  A++  ++
Sbjct: 200 RLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGNGVLSALQHAEI 252

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
            A   + L ++ +  + D+ +
Sbjct: 253 GAGFVSGLALVILAIIIDRFI 273



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 68/195 (34%), Gaps = 12/195 (6%)

Query: 380 IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W G I T   V++  +++ +I IP+GIW+     + S + P    +   PA V+    V
Sbjct: 90  LWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYLIPAV 149

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      +       +          +     G    P +  E A SF  T  +    + 
Sbjct: 150 AFFGIGMVPGVFASVIF----ALPPTVRFTNLGIREIPEELIEAAESFGSTEGQRLFKVE 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP      + G       A +  + + +           GLG  +  + +        + 
Sbjct: 206 LPLAKNTILAGVNQTIMLALSMVVTASMIG-------APGLGNGVLSALQHAEIGAGFVS 258

Query: 559 VLIMCCFVLALNRFL 573
            L +    + ++RF+
Sbjct: 259 GLALVILAIIIDRFI 273


>gi|71907775|ref|YP_285362.1| binding-protein dependent transport system inner membrane protein
           [Dechloromonas aromatica RCB]
 gi|71847396|gb|AAZ46892.1| Binding-protein-dependent transport systems inner membrane
           component [Dechloromonas aromatica RCB]
          Length = 271

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   +     +      ++FRV+   +I + + +P G+ +G    I +   P  Q+L   
Sbjct: 61  STLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPI 120

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PL +          N     L+  G  + +L N IAG       +   A +  +
Sbjct: 121 PPIAYIPLAILWFGLG----NPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGV 176

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W  +  +ILP   PY + G     G A+   IVSE+ +         GLG  I E+ E
Sbjct: 177 NQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEARE 230

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                +++ G++ +    LA++
Sbjct: 231 FMWSDKIIAGMITIGLLGLAID 252



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + I          P++        +    LP  A  +  R+++  +I       +  L  
Sbjct: 42  VAIKWWAYLMPGQPQEAGQSTLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMG 101

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S R+  +  P++ I++ IP + ++   +++F    P         + F I     + + 
Sbjct: 102 ASTRIYALFNPLMQILRPIPPIAYIPLAILWFGLGNPP--------SFFLIAIGAFFPVL 153

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +       +R+  ++ W  F  + +P + P ++  + + +   +  V+ SE
Sbjct: 154 MNTIAGVRQVDGIYLRAARNLGVNQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSE 213

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI V D      G+G  I  A +      I+  M+T+  +    D  + R
Sbjct: 214 MIAVND------GLGFRILEAREFMWSDKIIAGMITIGLLGLAIDTAVSR 257


>gi|299068062|emb|CBJ39276.1| nitrate ABC transporter [Ralstonia solanacearum CMR15]
          Length = 283

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 101/273 (36%), Gaps = 17/273 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQS 363
           P ++       +    R       ++         +  + W  +   V       + W++
Sbjct: 9   PGAHASAGSVPSKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAVPALPTPAVTWKA 68

Query: 364 IGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
              +     Y    +   V W    ++ RV     +A++I IP G  +G    +++   P
Sbjct: 69  AMALFADPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              LL       + P+ +        + N      +   + W ++ N   G +  P D+ 
Sbjct: 129 IISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            VA   +++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G       G+G
Sbjct: 185 NVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIG 238

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +         +V+ + ++    L L + L
Sbjct: 239 FWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271



 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP +     FVL    I + +  +       +  +            +   +      
Sbjct: 34  KGFPPMLGFALFVLAWQGIAMAVPALPTPAVTWKAAMALFADPFYRNGPNDQGVGWNVLA 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 260 IGVVGLLLEQALL 272


>gi|329115943|ref|ZP_08244660.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
 gi|326906348|gb|EGE53262.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
          Length = 575

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 16/235 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               +++  I +     ++  +P      +    +   L +    T   ++ A +IS++ 
Sbjct: 53  ALLFILLVTIAVFFLSKKKWPLPAFTFLGLLFIYNQG-LWEELINTFTLVVVASLISIVI 111

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+
Sbjct: 112 GVPLGIWMAKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFAL 168

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  I  +L E + SF  +  QK + + +P +   ++  +  +M  
Sbjct: 169 PPTVRF-----TNLGIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMML 223

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
               VV   MI         PG+G  +  A++  D+     + L ++ +  + D+
Sbjct: 224 ALSMVVTGSMI-------GAPGLGRKVLSALQHADIGTGFVSGLALVILAIILDR 271



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I    +         W    +      +     +      T   VVV  +I+ +
Sbjct: 51  IPALLFILLVTIAVFFLSKKKWPLPAFTFLGLLFIYNQGLWEELINTFTLVVVASLISIV 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     + + + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G      +  E A SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLGIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGRKVLSALQHADIGTGFVSGLALVILAIILDR 271


>gi|94987791|ref|YP_595892.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS9429]
 gi|94541299|gb|ABF31348.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS9429]
          Length = 578

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|50913550|ref|YP_059522.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS10394]
 gi|139473033|ref|YP_001127748.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           str. Manfredo]
 gi|50902624|gb|AAT86339.1| Glycine betaine-binding protein [Streptococcus pyogenes MGAS10394]
 gi|134271279|emb|CAM29495.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 575

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|224824744|ref|ZP_03697851.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224603237|gb|EEG09413.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 255

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +++RVVV  +  + + +P+G+ +G  P +     P  QLL   P   + PL
Sbjct: 53  GELVHDSIASLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFNPMLQLLRPIPPIAYIPL 112

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +          N     L+  G  + +L N I+G       +   A +  +     +  
Sbjct: 113 AILWFGLG----NPPSVFLIAIGAFFPVLMNTISGVRHVDGIYLRAARNLGVGRLALFTR 168

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   PY +TG     G A+   IVSE+ +         GLG  I E+ E     +++
Sbjct: 169 VMLPAATPYILTGVRIGIGTAFIVVIVSEMIA------VNDGLGYRILEAREFMWSDKII 222

Query: 557 LGVLIMCCFVLALN 570
            G++ +    LAL+
Sbjct: 223 AGMITIGLLGLALD 236



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       L    L   +  +  R++   V               S RL  +  
Sbjct: 36  LPAPSAVAAKWWEALLSGELVHDSIASLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFN 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L +++ IP + ++   +++F    P         ++F I     + +  +    + ++
Sbjct: 96  PMLQLLRPIPPIAYIPLAILWFGLGNPP--------SVFLIAIGAFFPVLMNTISGVRHV 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                  +R+  +     F  + +P + P ++  + + +   +  V+ SEMI V D    
Sbjct: 148 DGIYLRAARNLGVGRLALFTRVMLPAATPYILTGVRIGIGTAFIVVIVSEMIAVND---- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +      I+  M+T+  +    D  +
Sbjct: 204 --GLGYRILEAREFMWSDKIIAGMITIGLLGLALDSAM 239


>gi|170738745|ref|YP_001767400.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168193019|gb|ACA14966.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 285

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/271 (19%), Positives = 92/271 (33%), Gaps = 15/271 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R  G+ R   P   L         + L             G  W  +  +       D
Sbjct: 21  PRRAPGLARLREPLLALAFPLALGAVWHLATVGRPYSLIPPPGEVWTELRDLAVGGVNDD 80

Query: 376 VLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                 L     ++ RV+    +A +  +P+G+ IG  P +   + P  Q+L   P   +
Sbjct: 81  AFSGTLLTHLAASVSRVLGGFGLAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAW 140

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +       L+  G  + IL N + G  +      E A+     G   
Sbjct: 141 LPLAMILFGLGPRS----ACFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSAQ 196

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  ++LP   P   TG     G AW   +V E+          TGLGA I E+ +     
Sbjct: 197 FTQVVLPAALPSIFTGLRLGLGFAWVVIVVGEM------TGVPTGLGAMIMEARQLSRTE 250

Query: 554 EVVLGVLIMCCFVLALNR---FLWHPLYLYG 581
            V+ G++++       +R    +   L  + 
Sbjct: 251 IVICGMVVIGVAGFVSDRIVTLIGRRLLAWS 281



 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  + + +  R+L    +++L       L  +   +  +L P   I++ +P+  +L  
Sbjct: 84  GTLLTHLAASVSRVLGGFGLAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAWLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             +A F +F    + +  +    + ++   L E +      G  
Sbjct: 144 AMILFGLG--------PRSACFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSA 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +F  + +P ++P +   + + +   W  +V  EM  V        G+G+ I  A +    
Sbjct: 196 QFTQVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVPT------GLGAMIMEARQLSRT 249

Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVWSN 268
             ++  M+ +    F+ D+   L+ R ++ WS 
Sbjct: 250 EIVICGMVVIGVAGFVSDRIVTLIGRRLLAWSP 282


>gi|304397577|ref|ZP_07379454.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB]
 gi|304354749|gb|EFM19119.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB]
          Length = 290

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 88/256 (34%), Gaps = 13/256 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            K       +R               +  +  I         +    WQ+   +     Y
Sbjct: 27  PKAAVRPARLRPFLQRCIPAAGGLLLMLLVWQIAALFEPSFPSPYATWQAAQVLFADPFY 86

Query: 374 QDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +      + W    ++ RV +   +A+++ IP G  +G    ++    P   LL     
Sbjct: 87  SNGPNDQGIGWNVMASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSP 146

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+ +          +      +   + W ++ N   G    P D+  VA    ++ 
Sbjct: 147 LAWLPIGLLLFQRAEPAASWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 202

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W   R I+LP + P  +TG   + G AW   + +E+ + G       G+G +I       
Sbjct: 203 WTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNL 256

Query: 551 SFPEVVLGVLIMCCFV 566
           +   +++ +LI+    
Sbjct: 257 NVANILIAILIIGVVG 272



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 20/246 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           +R  P    LL  +LV  I  +        +   +               +   +     
Sbjct: 41  QRCIPAAGGLLLMLLVWQIAALFEPSFPSPYATWQAAQVLFADPFYSNGPNDQGIGWNVM 100

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       L  +   +  +  PI+ +++ +  L +L   ++ F   
Sbjct: 101 ASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLPIGLLLFQRA 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AA + IF   +W M  +  + +  IP+D   V+R  +LS W     + +P
Sbjct: 161 EP--------AASWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A+L
Sbjct: 213 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVANILIAIL 266

Query: 247 TMLGVI 252
            +  V 
Sbjct: 267 IIGVVG 272


>gi|188996007|ref|YP_001930258.1| nitrate ABC transporter, inner membrane subunit
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931074|gb|ACD65704.1| nitrate ABC transporter, inner membrane subunit
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 256

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++  +I S+I IPVG  +G    +++      Q+L       +FP+ +
Sbjct: 63  IGWQLYYSLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWFPIGL 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       N        +   + W  L N   GAS  P DFK V+  F  +   ++RY++
Sbjct: 123 ALFQ----NSEKASIFTIAITSIWPTLINTAYGASTIPQDFKNVSKVFGFSILNYFRYVV 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P  F + +TG   + G AW   + SE+ + G      TG+G YI +S    +   V+  
Sbjct: 179 VPYTFSFTLTGLKISIGIAWMVIVASEMLAGG------TGIGFYIWDSWNALNLRNVMSA 232

Query: 559 VLIMCCFVLALN 570
           ++++      L+
Sbjct: 233 IILIGVIGYILD 244



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 14/200 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R++   +I  L       +     RL  +   ++ I++ +  L + 
Sbjct: 59  NDKGIGWQLYYSLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWF 118

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F N        +E A+IF I  + +W    +       IP+D + VS+ F  S 
Sbjct: 119 PIGLALFQN--------SEKASIFTIAITSIWPTLINTAYGASTIPQDFKNVSKVFGFSI 170

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
              F Y+ VP++    +  + +S+   W  +VASEM+  G       GIG YI  +    
Sbjct: 171 LNYFRYVVVPYTFSFTLTGLKISIGIAWMVIVASEMLAGGT------GIGFYIWDSWNAL 224

Query: 237 DLLAILYAMLTMLGVIFLYD 256
           +L  ++ A++ +  + ++ D
Sbjct: 225 NLRNVMSAIILIGVIGYILD 244


>gi|86748882|ref|YP_485378.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
 gi|86571910|gb|ABD06467.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
          Length = 299

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +G+ +G        + P  Q+L   P        +
Sbjct: 101 LFWHLSASLQRVALGYSLAAIVGIALGVLVGQSVWAMRGLDPIFQVLRTIPPLA----WL 156

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +       ++   + W I+ N   G    P D++ VA+   +    ++  ++
Sbjct: 157 PLALAAFRDGQPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVM 216

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A I +E+   G       G+G +I ++       E++L 
Sbjct: 217 LPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 271 LFYVGIIGFVLDRMI 285



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 103/254 (40%), Gaps = 23/254 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65
           R+ P +      ++   ++     G       +   D   +  D           L  + 
Sbjct: 47  RVIPPLIVFTLLMVFWELVCRQA-GSALPPPSKVYSDTKELIFDPFFDRGGLDKGLFWHL 105

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           S +  R+     ++ +       L  +S      L PI  ++++IP L +L   +  F +
Sbjct: 106 SASLQRVALGYSLAAIVGIALGVLVGQSVWAMRGLDPIFQVLRTIPPLAWLPLALAAFRD 165

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        +AIF IF + +W +  +    + NIP+D   V+   +L+  + F  + +
Sbjct: 166 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVML 217

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + +   W  ++A+EM++ G       GIG +I  A     +  I+ A+
Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 271

Query: 246 LTMLGVIFLYDQLL 259
             +  + F+ D+++
Sbjct: 272 FYVGIIGFVLDRMI 285


>gi|300692646|ref|YP_003753641.1| nitrate ABC transporter [Ralstonia solanacearum PSI07]
 gi|299079706|emb|CBJ52383.1| nitrate ABC transporter [Ralstonia solanacearum PSI07]
          Length = 283

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 103/278 (37%), Gaps = 23/278 (8%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---------- 358
           L+  +     + G +          + +  +    +  F   V+    I           
Sbjct: 4   LAKALPGAQSSAGSVPARPAWRDWLVAAVVKGFPPVLGFALFVLAWQGIAMTIPALPTPA 63

Query: 359 IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           + W++   +     Y    +   V W    ++ RV     +A++I IP G  +G    ++
Sbjct: 64  VTWKAAVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLN 123

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +   P   LL       + P+ +        + N      +   + W ++ N   G +  
Sbjct: 124 AMASPIISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRV 179

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P D+  VA   +++ W+ +  ++ P + PY +TG   + G AW   + +E+ + G     
Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG----- 234

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G ++ +         +V+ + ++    L L + L
Sbjct: 235 -VGIGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271



 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67
           + FP +     FVL    I + +  +       +  V            +   +      
Sbjct: 34  KGFPPVLGFALFVLAWQGIAMTIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+ +   ++ +       L  +   L  +  PI+ +++ +  L +L   ++ F +  
Sbjct: 94  SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+ F  +  P 
Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  
Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259

Query: 248 MLGVIFLYDQLLF 260
           +  V  L +Q L 
Sbjct: 260 IGVVGLLLEQALL 272


>gi|152981495|ref|YP_001352171.1| ABC-type nitrate transport system, permease component
           [Janthinobacterium sp. Marseille]
 gi|151281572|gb|ABR89982.1| ABC-type nitrate transport system, permease component
           [Janthinobacterium sp. Marseille]
          Length = 309

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+++ IP+G  IG    +S    P   LL       + P+ +
Sbjct: 111 IGWNILASLKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGL 170

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +      +   + W ++ N   G    P D+  VA    ++ W+    I+
Sbjct: 171 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKIL 226

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     + P +++ 
Sbjct: 227 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVPHIIIA 280

Query: 559 VLIMCCFVLALNRFL 573
           ++++    L L + L
Sbjct: 281 IVVIGVVGLILEQIL 295



 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 105/251 (41%), Gaps = 20/251 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRT 68
           + P IF ++  +LV  II+    GI    V       +          +   +      +
Sbjct: 59  VLPPIFGMVFLILVWEIISAKSSGIPSPLVTFQSAQALFADPFYSNGPNDQGIGWNILAS 118

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+     ++ L       +  + + L  +  PI+ +++ +  L +L   ++ F    P
Sbjct: 119 LKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGLLVFKAADP 178

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   AAI++IF   +W M  +    +  +P+D   V++  +LS W+    +  P  
Sbjct: 179 --------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKILFPSV 230

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+ A++ +
Sbjct: 231 LPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVPHIIIAIVVI 284

Query: 249 LGVIFLYDQLL 259
             V  + +Q+L
Sbjct: 285 GVVGLILEQIL 295


>gi|169796004|ref|YP_001713797.1| nitrate ABC transporter, membrane protein [Acinetobacter baumannii
           AYE]
 gi|213157262|ref|YP_002319307.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii AB0057]
 gi|215483461|ref|YP_002325678.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB307-0294]
 gi|301344714|ref|ZP_07225455.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB056]
 gi|301510320|ref|ZP_07235557.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB058]
 gi|301596302|ref|ZP_07241310.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB059]
 gi|169148931|emb|CAM86806.1| putative transport protein (ABC superfamily, membrane); putative
           nitrate ABC transporter, membrane [Acinetobacter
           baumannii AYE]
 gi|213056422|gb|ACJ41324.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii AB0057]
 gi|213986090|gb|ACJ56389.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter
           baumannii AB307-0294]
          Length = 284

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     N  +++   +FW  V  G+A            N  T  DV++ +W   
Sbjct: 20  FQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFVNFSNVPTPLDVIHALWTFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F          +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S     + + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI          GIG +   +   Q+   I+  M+ +  +      L+
Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268


>gi|306828147|ref|ZP_07461410.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus pyogenes ATCC 10782]
 gi|304429684|gb|EFM32730.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus pyogenes ATCC 10782]
          Length = 575

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|167041505|gb|ABZ06255.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_007I05]
          Length = 631

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV + + +  I  +P+GI++G          P  +L    P   + PLV++      
Sbjct: 440 SFLRVFLGLSLGIIFGVPLGIFMGLNRFAKGFFDPLVELYRPVPPLAWAPLVITVFGI-- 497

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N+    L+       ++ +  AGAS         A S   + W+  R +I P   P 
Sbjct: 498 --DNVGKVFLLFMVALSIMIISARAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPE 555

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E  +       TTG+G     + +   +  + + + +M   
Sbjct: 556 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIGFVENVARKYMQYEVIWITIFVMGML 609

Query: 566 VLALN 570
            L  +
Sbjct: 610 GLLFD 614



 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 85/238 (35%), Gaps = 20/238 (8%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLP---QYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           G  E      ++D+V    +   +P    +   + LR+   + + ++F          +R
Sbjct: 407 GTVEPNFKSKVLDVVTGKYEAFKIPVPTGHIWDSFLRVFLGLSLGIIFGVPLGIFMGLNR 466

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
                  P++++ + +P L +    +  F     GK        +F +F   +  M  S 
Sbjct: 467 FAKGFFDPLVELYRPVPPLAWAPLVITVFGIDNVGK--------VFLLFMVALSIMIISA 518

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
                         + S   S WQ    +  P S+P ++  + +++   W  +VA+E + 
Sbjct: 519 RAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPEILTGIRVAVGMCWGTLVAAEFLA 578

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM---IVWSNK 269
                    GIG    +A K      I   +  M  +  L+D  + + +   I W  K
Sbjct: 579 GTT------GIGFVENVARKYMQYEVIWITIFVMGMLGLLFDLTIRKIIDKTIPWRGK 630


>gi|308186604|ref|YP_003930735.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1]
 gi|308057114|gb|ADO09286.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1]
          Length = 290

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 13/258 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + K       +R               +  +  +         +    WQ+   +    
Sbjct: 25  IIPKAAVRPARLRPLLQRAIPAAGGLLLMLLVWQLAALSEPSFPSPYATWQAAQVLFADP 84

Query: 372 TYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            Y +      + W    ++ RV +   +A+++ IP G  +G    ++    P   LL   
Sbjct: 85  FYSNGPNDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPV 144

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + P+ +          +      +   + W ++ N   G    P D+  VA    +
Sbjct: 145 SPLAWLPIGLLLFQRAEPAASWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQL 200

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W   R I+LP + P  +TG   + G AW   + +E+ + G       G+G +I     
Sbjct: 201 SEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWN 254

Query: 549 KGSFPEVVLGVLIMCCFV 566
             +   +++ +LI+    
Sbjct: 255 NLNVANILIAILIIGVVG 272



 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 20/246 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           +R  P    LL  +LV  +  +        +   +               +   +     
Sbjct: 41  QRAIPAAGGLLLMLLVWQLAALSEPSFPSPYATWQAAQVLFADPFYSNGPNDQGIGWNVL 100

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       L  +   +  +  PI+ +++ +  L +L   ++ F   
Sbjct: 101 ASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLPIGLLLFQRA 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AA + IF   +W M  +  + +  IP+D   V+R  +LS W     + +P
Sbjct: 161 EP--------AASWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++  IL A+L
Sbjct: 213 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVANILIAIL 266

Query: 247 TMLGVI 252
            +  V 
Sbjct: 267 IIGVVG 272


>gi|319745717|gb|EFV98014.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Streptococcus agalactiae ATCC 13813]
          Length = 575

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+  I +     ++  +P      +    +   L +    T   +L A +IS++  
Sbjct: 54  LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS ++  V+ PILD MQ++P   +L   V +F     G V G   + +FA+ 
Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S SF  +  QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L+++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I    +         WQ   +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271


>gi|33860929|ref|NP_892490.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33639661|emb|CAE18830.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 260

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 11/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + L + +   I++ RV++   +A ++ IP+G+ +G      S + P+ QLL       +
Sbjct: 61  PNDLGIGFNLLISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAW 120

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        N  +    ++   + W  L N   G ++   D+  V+ S   +    
Sbjct: 121 LPVGLFVFR----NSEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSIT 176

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +ILP I P  + G   + G AW   + +E+          TG+G +I       S  
Sbjct: 177 IRRVILPAIMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLE 229

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            + + ++I+      L++F 
Sbjct: 230 NIFVAIIIIGFTGFILDQFF 249



 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L    +++L       L   S+     L P + +++ +  L +L   +  F 
Sbjct: 70  LLISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAWLPVGLFVFR 129

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N        +E+  IF IF + +W    +    + +I  D   VS+S   S       + 
Sbjct: 130 N--------SEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVI 181

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  MP ++  M +SM   W  +VA+EM++         GIG +I        L  I  A
Sbjct: 182 LPAIMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLENIFVA 234

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +    F+ DQ  
Sbjct: 235 IIIIGFTGFILDQFF 249


>gi|313904100|ref|ZP_07837480.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313471249|gb|EFR66571.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 279

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 12/233 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASII 400
            L +FW        +          V    +  +    ++    I++ RV++  +I+S++
Sbjct: 45  ALILFWVGAGAFGKLNTIVLPSFGTVVDTFWSGITSGQLLAALAISIRRVLLGYLISSVL 104

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I +GI IG   H         Q+L   P   + PLV+  +     +       L+  G 
Sbjct: 105 GIVLGILIGLSRHAQRLTGLLIQVLRPIPPIAWIPLVILWMGIGENSK----VFLIFLGG 160

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + +L NVI G         EVA       +++   +++P   P   TG   A G  W  
Sbjct: 161 FFTVLINVIDGIRYTDKKLTEVAWVMETPKFKYITRLVIPAALPSIFTGLKVALGSCWTC 220

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +E+ +       T+G+G  I+ +   G    V++G+L +      ++  L
Sbjct: 221 VVAAELVA------STSGIGYMISNARNFGQMDVVIVGMLSIGLVGKLMDTIL 267



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 91/222 (40%), Gaps = 17/222 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +VD     +    L    + +  R+L   +IS +   V   L   SR    +   ++ ++
Sbjct: 70  VVDTFWSGITSGQLLAALAISIRRVLLGYLISSVLGIVLGILIGLSRHAQRLTGLLIQVL 129

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP + ++   +++            E + +F IF    + +  ++   +    + L E
Sbjct: 130 RPIPPIAWIPLVILWMGIG--------ENSKVFLIFLGGFFTVLINVIDGIRYTDKKLTE 181

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V+       ++    L +P ++P +   + +++   W  VVA+E++          GIG 
Sbjct: 182 VAWVMETPKFKYITRLVIPAALPSIFTGLKVALGSCWTCVVAAELVA------STSGIGY 235

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
            I+ A     +  ++  ML++  V  L D +L    + ++ W
Sbjct: 236 MISNARNFGQMDVVIVGMLSIGLVGKLMDTILNAIGKRLLAW 277


>gi|146307132|ref|YP_001187597.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina ymp]
 gi|145575333|gb|ABP84865.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina ymp]
          Length = 283

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            WQ+   +     Y    + + + W    ++ RV V   +A+++ IP+G  IG    ++ 
Sbjct: 66  TWQAALVLFADPFYDNGPNDMGIGWNILNSLGRVGVGFGLAALVGIPLGFAIGRFAFLAG 125

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P   LL       + P+ +                ++   + W I+ N  AG ++ P
Sbjct: 126 MLAPIISLLRPVSPLAWLPIGLLVFEAAG----PASIWVIFISSIWPIILNTAAGVASVP 181

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++ ++    I+ P + P+ +TG   A G AW   + +E+ + G      
Sbjct: 182 QDYLNVARVLKLSEFKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTGG------ 235

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG ++ +     +   +++ ++I+    LAL + L
Sbjct: 236 IGLGFWVWDEWNNLNVEHILIAIIIVGLVGLALEQTL 272



 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 23/248 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRM 72
           LL  +  IG  ++L    +    P        +           +   +      +  R+
Sbjct: 40  LLGILAFIGFWSLLAQYSEGLPGPLSTWQAALVLFADPFYDNGPNDMGIGWNILNSLGRV 99

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                ++ L          +   L  +L PI+ +++ +  L +L   ++ F    P    
Sbjct: 100 GVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP---- 155

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A+I+ IF S +W +  +    + ++P+D   V+R  +LS ++    +  P  +P L
Sbjct: 156 ----ASIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLPHL 211

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +++   W  +VA+EM+  G       G+G ++       ++  IL A++ +  V 
Sbjct: 212 MTGIRLAIGVAWLVIVAAEMLTGGI------GLGFWVWDEWNNLNVEHILIAIIIVGLVG 265

Query: 253 FLYDQLLF 260
              +Q L 
Sbjct: 266 LALEQTLL 273


>gi|91788795|ref|YP_549747.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91698020|gb|ABE44849.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 252

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E    + +   V   L   W+ +V      I    +  +           +      ++F
Sbjct: 2   EKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASLF 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV    + A+++ +P+G+W+G        + P  Q+L       + PL +      +++P
Sbjct: 62  RVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVSP 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 L+   + + ++    AG       +   A +F ++ +  +R +I+P + P  + 
Sbjct: 122 ----IFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIV 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVL 567
           G     G AW   + +E+ +        +GLG  I +S   G+ +  V+  ++I+    L
Sbjct: 178 GMRIGLGVAWLVVVAAEMIALR------SGLGYLIMDSRNAGNRYDLVIASMVIIGVIGL 231

Query: 568 ALNRFLWH 575
            L+  +  
Sbjct: 232 LLDGTMRR 239



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 104/263 (39%), Gaps = 16/263 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           + I   +  L+A +    +I +    +   T P  +V      +   +L ++   +  R+
Sbjct: 5   KNILAPLAVLVALIACWWVIVLQTESVIFPT-PLQVVTGTMELVADGTLWEHIGASLFRV 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +  + + L          +       L PI  I++ I  + ++   +++F         
Sbjct: 64  GTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGN----- 118

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              ++ IF IF + V+ M       +  I R     + +F +S +  F  + +P  +P +
Sbjct: 119 ---VSPIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEI 175

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-LLAILYAMLTMLGV 251
           +  M + +   W  VVA+EMI +        G+G  I  +    +    ++ +M+ +  +
Sbjct: 176 IVGMRIGLGVAWLVVVAAEMIAL------RSGLGYLIMDSRNAGNRYDLVIASMVIIGVI 229

Query: 252 IFLYDQLLFRPMIVWSNKFRLER 274
             L D  + R   + S ++R  R
Sbjct: 230 GLLLDGTMRRLEGLKSIRWRYGR 252


>gi|255261600|ref|ZP_05340942.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62]
 gi|255103935|gb|EET46609.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62]
          Length = 420

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV     ++I IP+G  +G          P  + +   P     PLV+     
Sbjct: 227 GYSLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGI 286

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     +G S         A S   + W+  R++I+P   
Sbjct: 287 GESGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQLMRHVIIPNSL 342

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +       + G G  I  + +  +   V++G++++ 
Sbjct: 343 PEIFTGARVAMGVCWGTVVAAELVA------ASQGAGMMIMTAAKFQNTDIVIMGIILIG 396

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                ++  +      Y  R L
Sbjct: 397 VIGFGIDMLM-----RYAERLL 413



 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++   +  R++       L           S        PI++ M+ +P L  +   
Sbjct: 221 SLWEHLGYSLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLV 280

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W M  +    +  +       + S   S WQ 
Sbjct: 281 IIWFGIGESGK--------IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQL 332

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ +P S+P +     ++M   W  VVA+E++          G G  I  A K Q+  
Sbjct: 333 MRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAASQ------GAGMMIMTAAKFQNTD 386

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++  ++ +  + F  D L+    R ++ W  K
Sbjct: 387 IVIMGIILIGVIGFGIDMLMRYAERLLVPWKGK 419


>gi|77409771|ref|ZP_00786425.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77171620|gb|EAO74835.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 575

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+  I +     ++  +P      +    +   L +    T   +L A +IS++  
Sbjct: 54  LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS ++  V+ PILD MQ++P   +L   V +F     G V G   + +FA+ 
Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S SF  +  QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L+++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I    +         WQ   +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271


>gi|170017667|ref|YP_001728586.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc citreum KM20]
 gi|169804524|gb|ACA83142.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc citreum KM20]
          Length = 568

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 18/240 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMVI 78
           L+A  + + I  I L  I  T           + L +    +L      T   ++ A VI
Sbjct: 46  LVAVPMPLMIAGITLIAILTTPKKYGFPLFTFVGLAIIANQNLWDDLMSTLTLVIMASVI 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+       + AKS +   V+ PILD MQ++P   +L   V +F     G V G   + 
Sbjct: 106 SLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASI 162

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA     +  M       +  +P  L E + SF  + WQK   L +P +   ++     
Sbjct: 163 IFA-----LPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTILAGANQ 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + MI         PG+G  +  A++  ++ +     L ++ +  + D+ 
Sbjct: 218 TIMLALSMVVTASMI-------GAPGLGRGVLSAVQHANIGSGFVNGLGLVILAIIIDRF 270



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++  +I+ +I IP+GI     P  ++ ++P    +   P  V+    V+      
Sbjct: 95  TLTLVIMASVISLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFGIGV 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +         ++     G    P    E A SF  T W+    + LP     
Sbjct: 155 VPGVFASIIF----ALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNT 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + GA      A +  + + +           GLG  +  + +  +     +  L +   
Sbjct: 211 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHANIGSGFVNGLGLVIL 263

Query: 566 VLALNRF 572
            + ++RF
Sbjct: 264 AIIIDRF 270


>gi|227432669|ref|ZP_03914642.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|227351551|gb|EEJ41804.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
          Length = 573

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IGI  I +    +         +  + +    L      T   ++ A ++SL+    
Sbjct: 58  LMIIGITVIAIVTTPKKIGFPLFTLLGLLLIANQGLWSDLMNTVTLVIMASIVSLIIGIP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L AKS++  +V+ PILD MQ++P   +L   V +F     G V G   + IFA    
Sbjct: 118 LGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASIIFA---- 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M       +  +P DL E + SF  + WQK + L +P +   ++     ++     
Sbjct: 171 -LPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTILAGANQTIMLALS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI         PG+G  +  A++  D+ +     L ++ +  + D+ 
Sbjct: 230 MVVTASMI-------GAPGLGRGVLSAVQHADVGSGFVNGLGLVILAIVIDRF 275



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++  I++ II IP+GI        +  +QP    +   P  V+    V+      
Sbjct: 100 TVTLVIMASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGV 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +         ++     G    P D  E A SF  T W+    + LP     
Sbjct: 160 VPGVFASIIF----ALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNT 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + GA      A +  + + +           GLG  +  + +        +  L +   
Sbjct: 216 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHADVGSGFVNGLGLVIL 268

Query: 566 VLALNRF 572
            + ++RF
Sbjct: 269 AIVIDRF 275


>gi|116617483|ref|YP_817854.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096330|gb|ABJ61481.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IGI  I +    +         +  + +    L      T   ++ A ++SL+    
Sbjct: 56  LMIIGITVIAIVTTPKKIGFPLFTLLGLLLIANQGLWSDLMNTVTLVIMASIVSLIIGIP 115

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L AKS++  +V+ PILD MQ++P   +L   V +F     G V G   + IFA    
Sbjct: 116 LGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASIIFA---- 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M       +  +P DL E + SF  + WQK + L +P +   ++     ++     
Sbjct: 169 -LPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTILAGANQTIMLALS 227

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI         PG+G  +  A++  D+ +     L ++ +  + D+ 
Sbjct: 228 MVVTASMI-------GAPGLGRGVLSAVQHADVGSGFVNGLGLVILAIVIDRF 273



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++  I++ II IP+GI        +  +QP    +   P  V+    V+      
Sbjct: 98  TVTLVIMASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGV 157

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +         ++     G    P D  E A SF  T W+    + LP     
Sbjct: 158 VPGVFASIIF----ALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNT 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + GA      A +  + + +           GLG  +  + +        +  L +   
Sbjct: 214 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHADVGSGFVNGLGLVIL 266

Query: 566 VLALNRF 572
            + ++RF
Sbjct: 267 AIVIDRF 273


>gi|110638367|ref|YP_678576.1| nitrate ABC transporter permease [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281048|gb|ABG59234.1| nitrate ABC transporter, permease component [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 377

 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 14/213 (6%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   Y      +     ++  V   ++++  I IP+GI +G    + + I    Q+L   
Sbjct: 162 SEIRYTGRPSFVDQIGTSLKTVFAGVLLSMFIAIPIGILLGLSETLRTSINWLIQILKPV 221

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVA 483
              V+  LV   +     +  +  S L+ F +      W  L N   G ++   D+  V+
Sbjct: 222 SPVVWLLLVSMVIKTLLTDSTMDKSFLISFISVGLCGMWATLVNTSMGVASVDKDYINVS 281

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +  W+    I+LP  FP   TG       +W   I  E+ +      ++ GLG+++
Sbjct: 282 KVLRLNVWKNIYKIVLPSSFPLIFTGIRITVSVSWMVLIAIELLA------QSPGLGSFV 335

Query: 544 AESTEKGSFP---EVVLGVLIMCCFVLALNRFL 573
            E  + G+     ++++ + ++      L++ +
Sbjct: 336 WEQFQNGANDSNAKILVAMFVIGGIGFLLDKIM 368



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   + + +++S+        L   S  L   +  ++ I++ +  + +L    +    L 
Sbjct: 179 SLKTVFAGVLLSMFIAIPIGILLGLSETLRTSINWLIQILKPVSPVVWLLLVSMVIKTLL 238

Query: 128 PGKVI-GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +  + L +  ++    +W    +    + ++ +D   VS+  RL+ W+  + + +P
Sbjct: 239 TDSTMDKSFLISFISVGLCGMWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLP 298

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILY 243
            S P +   + +++S  W  ++A E++         PG+GS++    +         IL 
Sbjct: 299 SSFPLIFTGIRITVSVSWMVLIAIELLA------QSPGLGSFVWEQFQNGANDSNAKILV 352

Query: 244 AMLTMLGVIFLYDQLL 259
           AM  + G+ FL D+++
Sbjct: 353 AMFVIGGIGFLLDKIM 368


>gi|153006707|ref|YP_001381032.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
 gi|152030280|gb|ABS28048.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
          Length = 274

 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 101/266 (37%), Gaps = 18/266 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L      +        + + + + +S    +    +     + + W      +  +   +
Sbjct: 3   LRSQAIRLARQLLVPAIVIAAWEGISRAGWVSPIVLPAPSQVLLRWIDYARPLAPYDPAE 62

Query: 376 VLYVIWL--------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              + W+           ++ RV     + +++ +P+G+ +G +P +   + P  Q+L  
Sbjct: 63  GSRLAWIFSGELPHDALASLIRVAGGFALGAVLALPLGLLMGAKPMVYELMNPLVQILRP 122

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL +          N     L+  G  + IL N IAG       +   A +  
Sbjct: 123 IPPIAYIPLAILWFGLG----NPPAFFLISLGAFFPILMNTIAGVRNVDAIYLRAAKNLG 178

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W  +  I++P   PY + G     G A+   IV+E+ +        +GLG  I E+ 
Sbjct: 179 ASEWTLFWRIMIPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNSGLGYRILEAR 232

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           E     +V+ G++ +    L ++ F+
Sbjct: 233 EYFWSDKVIAGMISIGLAGLGIDFFM 258



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 90/240 (37%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+   + +L    +   P    D    +    +    LP  A  + +R+     +  +
Sbjct: 35  PIVLPAPSQVLLRWIDYARPLAPYDPAEGSRLAWIFSGELPHDALASLIRVAGGFALGAV 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L      +  ++ P++ I++ IP + ++   +++F    P         A F 
Sbjct: 95  LALPLGLLMGAKPMVYELMNPLVQILRPIPPIAYIPLAILWFGLGNPP--------AFFL 146

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + N+       +++   S W  FW + +P +MP ++  + + + 
Sbjct: 147 ISLGAFFPILMNTIAGVRNVDAIYLRAAKNLGASEWTLFWRIMIPAAMPYILAGVRIGIG 206

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V        G+G  I  A +      ++  M+++       D  + R
Sbjct: 207 VAFIVVIVAEMIAVNS------GLGYRILEAREYFWSDKVIAGMISIGLAGLGIDFFMNR 260


>gi|225628474|ref|ZP_03786508.1| ABC transporter related protein [Brucella ceti str. Cudo]
 gi|225616320|gb|EEH13368.1| ABC transporter related protein [Brucella ceti str. Cudo]
          Length = 510

 Score =  143 bits (362), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 86/250 (34%), Gaps = 13/250 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L      
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242

Query: 577 LYLYGTRCLR 586
           L  +  R  +
Sbjct: 243 LTQWQERAWK 252



 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 20  FDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            +LL+F + IG   +L   G      P D+++     L    L      +  R+LS  V+
Sbjct: 10  LNLLSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVL 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        L    R    ++ P +   + IP L  +   +V             E   
Sbjct: 70  GVALAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPK 121

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF IF +   +   + YQ + ++ R L   +R         F  + VP S+P ++  + +
Sbjct: 122 IFVIFLASFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRI 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   W  VVA+E+I          G+G  +  A    DL  I  +++T+  +    D+L
Sbjct: 182 GLGSAWATVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRL 235

Query: 259 LF---RPMIVWSNK 269
           L    R +  W  +
Sbjct: 236 LQAADRRLTQWQER 249


>gi|19745348|ref|NP_606484.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           MGAS8232]
 gi|19747452|gb|AAL96983.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS8232]
          Length = 575

 Score =  143 bits (362), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|158422309|ref|YP_001523601.1| nitrate transporter component [Azorhizobium caulinodans ORS 571]
 gi|158329198|dbj|BAF86683.1| nitrate transporter component [Azorhizobium caulinodans ORS 571]
          Length = 302

 Score =  143 bits (362), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 80/200 (40%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + +     +++ RV V   +A+++ +  G  IG        + P  Q+L   P    
Sbjct: 99  PQDIGLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLA- 157

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
               +        + N     ++   + W I+ N   G    P D++ VA    +    +
Sbjct: 158 ---WLPLALAAFRDSNPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEF 214

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP   PY  TG     G +W A + +E+ + G       G+G +I ++      P
Sbjct: 215 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 268

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++++ ++ +      L+R +
Sbjct: 269 DIIVALVYIGVVGFVLDRLV 288



 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R+     ++ +   +   L  +S      L PI  +++++P L +L   
Sbjct: 103 GLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLPLA 162

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +  P        +AIF IF + +W +  +    + NIP+D   V++  RL+  + 
Sbjct: 163 LAAFRDSNP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEF 214

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + P +   + + +   W  +VA+EM+  G       GIG +I  A     L 
Sbjct: 215 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 268

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  V F+ D+L+
Sbjct: 269 DIIVALVYIGVVGFVLDRLV 288


>gi|307130433|ref|YP_003882449.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306527962|gb|ADM97892.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 569

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 88/566 (15%), Positives = 185/566 (32%), Gaps = 71/566 (12%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           L P ++R I   +   LA +L+  + + L     +       V    I+L    L     
Sbjct: 57  LTPRLTRHIVAPLLLPLAVLLLWSLSSTLGWMPPQILPAPSRVVTTAISLLQGDLLSQLL 116

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R++S +   +L   +   L   S R   +L P +  +  IP LG++   +V F   
Sbjct: 117 ISLHRLVSGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWIPLFMVLFGID 176

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+          +  + +  +T    + + ++P  L +V+R+ RL    +   L +P
Sbjct: 177 DGLKLA--------VLIKAVIVPVTLHSQRGVRDVPPALLDVARTLRLPRLTRLTRLTLP 228

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P     + +++S  W  ++  E++          GIG  +    +   L  +L  + 
Sbjct: 229 SALPVWFTGLRLALSQAWVSLIVVELLASSQ------GIGYLMVWGRQLFQLDIVLVCIA 282

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            +                                    +L  +  T   + +        
Sbjct: 283 VIGLTG--------------------------------LLMEWGITQLDQRL-------- 302

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             ++     + R             + L             W   +     G    +I +
Sbjct: 303 --IAWPHPPVGRLHAAPVGQSIGLAVPLLLLALWQLASHHGWVDALLLPPPGEVLHAIWH 360

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
            V+  +  D +        +++R +V   +     +  G+ +G      +   P   LL 
Sbjct: 361 GVSDGSLPDAMRH------SLWRALVGGALGVSAGLLAGLALGLSTRAEAVFTPTLTLLR 414

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + PL+ + V     N +      +     + +L     G        +EVA   
Sbjct: 415 QVALFAWLPLITAWVG----NDDGGKVTFIALVAFFPMLVATHRGVRQRSLALQEVAQVL 470

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +  +   R +ILPG  P   TG   A   AW  +I +E            G+G+ +  +
Sbjct: 471 RLPWFHRLRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSG-----AGIGSLMINA 525

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            +    P ++ G+L++       +  
Sbjct: 526 QQLLDMPIILSGMLLIGVTGALFDHL 551



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 16/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +++  +   +   SLP     +  R L    + +    +       S R   V  
Sbjct: 348 LPPPGEVLHAIWHGVSDGSLPDAMRHSLWRALVGGALGVSAGLLAGLALGLSTRAEAVFT 407

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +++ + +  +L     +  N   GKV    L A F         M  + ++ +   
Sbjct: 408 PTLTLLRQVALFAWLPLITAWVGNDDGGKVTFIALVAFF--------PMLVATHRGVRQR 459

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L+EV++  RL  + +   L +P + P L   + ++M   W   + +E  +       
Sbjct: 460 SLALQEVAQVLRLPWFHRLRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA--- 516

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             GIGS +  A +  D+  IL  ML +     L+D L   L + M  W
Sbjct: 517 --GIGSLMINAQQLLDMPIILSGMLLIGVTGALFDHLGQRLEQRMTRW 562


>gi|242239916|ref|YP_002988097.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii
           Ech703]
 gi|242131973|gb|ACS86275.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii
           Ech703]
          Length = 304

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 13/212 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              WQ+   +     Y    +   + W    ++ RV V   +A+++ IP G  IG    +
Sbjct: 84  WQTWQAALTLFADPFYVAGPNDQGIGWNVLASIRRVAVGFGLAALVGIPAGFLIGRFRFM 143

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 144 AAMFNPLIALLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +     I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 200 IPQDYLNVARVLRLSEFTIMYKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG---- 255

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
              G+G +I       + P +++ + I+    
Sbjct: 256 --VGIGFWIWNEWNNLNVPNIIIAIFIIGVVG 285



 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 83/196 (42%), Gaps = 14/196 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +      +  R+     ++ L       L  + R +  +  P++ +++ +  L +L
Sbjct: 104 NDQGIGWNVLASIRRVAVGFGLAALVGIPAGFLIGRFRFMAAMFNPLIALLRPVSPLAWL 163

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  RLS 
Sbjct: 164 PIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLRLSE 215

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +   + + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       
Sbjct: 216 FTIMYKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNL 269

Query: 237 DLLAILYAMLTMLGVI 252
           ++  I+ A+  +  V 
Sbjct: 270 NVPNIIIAIFIIGVVG 285


>gi|330503532|ref|YP_004380401.1| nitrate ABC transporter inner membrane subunit [Pseudomonas
           mendocina NK-01]
 gi|328917818|gb|AEB58649.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas
           mendocina NK-01]
          Length = 264

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 13/217 (5%)

Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
            WQ+   +     Y    + + + W    ++ RV V   +A+++ IP+G  IG    ++ 
Sbjct: 47  TWQAALVLFADPFYDNGPNDMGIGWNILNSLGRVGVGFGLAALVGIPLGFAIGRFAFLAG 106

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P   LL       + P+ +                ++   + W I+ N  AG ++ P
Sbjct: 107 MLAPIISLLRPVSPLAWLPIGLLVFEAAG----PASIWVIFISSIWPIILNTAAGVASVP 162

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D+  VA    ++  +    I+ P + P+ +TG   A G AW   + +E+ + G      
Sbjct: 163 QDYLNVARVLKLSECKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTGG------ 216

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG ++ +     +   +++ ++I+    LAL + L
Sbjct: 217 IGLGFWVWDEWNNLNVEHILIAIIIVGLVGLALEQML 253



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 23/248 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRM 72
           LL  +  IG  ++L    +    P        +           +   +      +  R+
Sbjct: 21  LLGILAFIGFWSLLAQYSEGLPGPLSTWQAALVLFADPFYDNGPNDMGIGWNILNSLGRV 80

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                ++ L          +   L  +L PI+ +++ +  L +L   ++ F    P    
Sbjct: 81  GVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP---- 136

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A+I+ IF S +W +  +    + ++P+D   V+R  +LS  +    +  P  +P L
Sbjct: 137 ----ASIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSECKVLTRILFPAVLPHL 192

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +++   W  +VA+EM+  G       G+G ++       ++  IL A++ +  V 
Sbjct: 193 MTGIRLAIGVAWLVIVAAEMLTGGI------GLGFWVWDEWNNLNVEHILIAIIIVGLVG 246

Query: 253 FLYDQLLF 260
              +Q+L 
Sbjct: 247 LALEQMLL 254


>gi|94989669|ref|YP_597769.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10270]
 gi|94543177|gb|ABF33225.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10270]
          Length = 575

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|270262342|ref|ZP_06190614.1| transporter [Serratia odorifera 4Rx13]
 gi|270044218|gb|EFA17310.1| transporter [Serratia odorifera 4Rx13]
          Length = 294

 Score =  143 bits (361), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 17/262 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           I   +     PL        +            F +         ++ + W         
Sbjct: 10  IPTPTRAEVVPLKIPAPPKPQPKARWSLPLQNAFRRAVPAALGLVLILVVWQIAALNSKG 69

Query: 358 G----IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                  WQ+   +     Y    +   + W    ++ RV     +A+++ IP G  +G 
Sbjct: 70  FPTPVATWQAALTLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGR 129

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +++ + P   LL       + P+ +                 +   + W ++ N   
Sbjct: 130 FAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWT----IFICSIWPMILNTAE 185

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G +  P D+  VA    ++ W   R I+ P + PY +TG   + G AW   + +E+ + G
Sbjct: 186 GVARIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 245

Query: 531 HIHLRTTGLGAYIAESTEKGSF 552
                  G+G +I       + 
Sbjct: 246 ------VGIGFWIWNEWNNLNV 261



 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 20/232 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYAS 66
           RR  P    L+  ++V  I  +   G        +  +            +   +     
Sbjct: 44  RRAVPAALGLVLILVVWQIAALNSKGFPTPVATWQAALTLFADPFYSAGPNDQGIGWNVL 103

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+ +   ++ L       L  +   L  +L PI+ +++ +  L +L   ++ F   
Sbjct: 104 ASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRA 163

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W     +  P
Sbjct: 164 EP--------ASTWTIFICSIWPMILNTAEGVARIPQDYLNVARVLKLSEWTVMRKILFP 215

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 216 AVLPYVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNV 261


>gi|94993560|ref|YP_601658.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10750]
 gi|94547068|gb|ABF37114.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS10750]
          Length = 575

 Score =  143 bits (361), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|71909972|ref|YP_281522.1| glycine betaine-binding protein/glycine betaine transporter
           permease [Streptococcus pyogenes MGAS5005]
 gi|71852754|gb|AAZ50777.1| glycine betaine-binding protein/glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS5005]
          Length = 575

 Score =  143 bits (361), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|158423902|ref|YP_001525194.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
 gi|158330791|dbj|BAF88276.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
          Length = 273

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV+V + IA  + +PVG+ +G      +   P  Q L       + P+ V     
Sbjct: 82  LVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGV 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  L+ F T W IL    AG       +  V+ S   TGW     +ILP I 
Sbjct: 142 GDA----PIYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAIL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG   A G AW   +  E+         + GLG +I ++ ++ ++PE++  +L++ 
Sbjct: 198 GHVLTGVRLAIGIAWIVLVPCEMLG------VSAGLGYFILDTRDRLAYPELMATILVIG 251

Query: 564 CFVLALN 570
               AL+
Sbjct: 252 IIGFALD 258



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 14/218 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
             +   P   +  +   L    LP     +  R+L  + I+L        L   SR+   
Sbjct: 55  FAQKFSPTTALPALWRLLLQSDLPLNILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEA 114

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
              P    ++ I  L ++   V+ F           +    F +  + VW +  +    +
Sbjct: 115 ATTPAFQFLRMISPLSWMPIAVMVFGVG--------DAPIYFLLAFATVWPILLATAAGV 166

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             I      VSRS   +GW+    + +P  +  ++  + +++   W  +V  EM+ V   
Sbjct: 167 RQIDPQWLLVSRSLAATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSA- 225

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                G+G +I           ++  +L +  + F  D
Sbjct: 226 -----GLGYFILDTRDRLAYPELMATILVIGIIGFALD 258


>gi|26986952|ref|NP_742377.1| nitrate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
 gi|24981564|gb|AAN65841.1|AE016212_7 nitrate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 260

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 21/256 (8%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F Q+ +N ++   L  F +       +  AWQ +              ++     ++ RV
Sbjct: 21  FWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLT----------SSTLLAHLGSSLARV 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                 A+++ + +G+ IG        + P  ++L   PA  + PL +       L+   
Sbjct: 71  FAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS--- 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  +   G  + IL N + G  A        A S     W   R ++LPG  P  VTG 
Sbjct: 128 -MVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGL 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G +W   + +E+ S         G+G Y  ES    ++P++V+G+L++    +  +
Sbjct: 187 AIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSS 240

Query: 571 RFLWHPLYLYGTRCLR 586
             +   L    T   R
Sbjct: 241 ALV-KRLGALATPWYR 255



 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P+ ++D     L   +L  +   +  R+ +    + L       L  +S+     L+P
Sbjct: 41  PTPKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ IP + ++   ++ F          +EL+ +F  FT  ++ +  +    +  + 
Sbjct: 101 PLEVLRPIPAVAWIPLAILMF--------PSSELSMVFITFTGALFPILLNTVHGVEAVD 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   +RS     W     + +P ++P +V  + + M   WF +V +EMI         
Sbjct: 153 PRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMISG------Q 206

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG Y   +   Q+   I+  ML +  +      L+ R
Sbjct: 207 FGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKR 245


>gi|118592851|ref|ZP_01550240.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118434621|gb|EAV41273.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 319

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++M R+++  I A++I I  G+ +G    I S I P+ ++L   PA  + PL +     
Sbjct: 125 AVSMQRILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAILMWPT 184

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  + + G  + I+ N + G    P      A S   +  + + ++ILP   
Sbjct: 185 EEAS----IIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAAL 240

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G     G +W + +  E+ S  +      G+G +   +    ++P++V+G+L++ 
Sbjct: 241 PSIAAGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLINYPDIVVGMLVIG 294

Query: 564 CFVLALN---RFLWHPLYLYGTR 583
                     R    PL  +  R
Sbjct: 295 GLGTLSTYAVRLAMQPLLAWQKR 317



 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 95/240 (39%), Gaps = 17/240 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
                +    P  +       L       + + +  R+L   + + +   +   L  +S+
Sbjct: 94  FYINFENIPSPEKVFTAFWTHLGETDFYIHIAVSMQRILIGYITAAVIGILAGVLMGRSK 153

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +  ++ P +++++ IP + ++   ++ +           E + I+      ++ +  + 
Sbjct: 154 LIRSLIYPYIEVLRPIPAVAWIPLAILMW--------PTEEASIIYITLLGALFPIVLNT 205

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +   P  L   ++S   S  Q FW++ +P ++P +   + + M   WF ++A E+I 
Sbjct: 206 LHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAALPSIAAGLAIGMGVSWFSLLAGEIIS 265

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNKFR 271
                    GIG +   A    +   I+  ML + G+  L     +L  +P++ W  + R
Sbjct: 266 G------QYGIGYFTWNAYSLINYPDIVVGMLVIGGLGTLSTYAVRLAMQPLLAWQKRAR 319


>gi|22537935|ref|NP_688786.1| amino acid ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|76798898|ref|ZP_00781104.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22534834|gb|AAN00659.1|AE014273_6 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76585744|gb|EAO62296.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 575

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+  I +     ++  +P      +    +   L +    T   +L A +IS++  
Sbjct: 54  LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS ++  V+ PILD MQ++P   +L   V +F     G V G   + +FA+ 
Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S SF  +  QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTVKQKLFKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L+++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I    +         WQ   +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTVKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271


>gi|257885408|ref|ZP_05665061.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,501]
 gi|257821264|gb|EEV48394.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,501]
          Length = 571

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 51  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 77  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268


>gi|115523285|ref|YP_780196.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115517232|gb|ABJ05216.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 299

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 23/264 (8%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----- 58
           Y  L   ++ R+ P +  ++  +++  +I     G       +   D   +  D      
Sbjct: 37  YGKLAREVAARVIPPLIVIVFSMVIWELICRRT-GSTLPPPSKVYSDTKELIFDPFFDRG 95

Query: 59  ---HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                L  + S +  R+     ++ +       L  +S      L PI  ++++IP L +
Sbjct: 96  GIDKGLFWHLSASLQRVAFGYSLAAVAGIGLGVLVGQSVWAMRGLDPIFQVLRTIPPLAW 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F +  P        +AIF IF + +W +  +    + NIP+D   V+   RL+
Sbjct: 156 LPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLN 207

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + FW + +P + P +   + + +   W  ++A+EM++ G       GIG +I  A   
Sbjct: 208 PLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNS 261

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  I+ A+  +  + F+ D+ +
Sbjct: 262 SHISEIILALFYVGIIGFVLDRAI 285



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV     +A++  I +G+ +G        + P  Q+L   P        +
Sbjct: 101 LFWHLSASLQRVAFGYSLAAVAGIGLGVLVGQSVWAMRGLDPIFQVLRTIPPLA----WL 156

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +       ++   + W I+ N   G    P D++ VA+   +    ++  I+
Sbjct: 157 PLALAAFRDGQPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPLEFFWKIM 216

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  TG     G +W A I +E+   G       G+G +I ++       E++L 
Sbjct: 217 LPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270

Query: 559 VLIMCCFVLALNRFL 573
           +  +      L+R +
Sbjct: 271 LFYVGIIGFVLDRAI 285


>gi|152981435|ref|YP_001354775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281512|gb|ABR89922.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 276

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV      A+++ IP+G+ IG    I   + P  QLL   P   + PL +       
Sbjct: 83  SVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPLSMIFFGIGP 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+  G  + I+FN   G  A  N   E A      G   +R ++LP   P 
Sbjct: 143 N----AAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSLFRQVVLPAAMPS 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   +V E+           GLGA I +         V+ G++++   
Sbjct: 199 ILNGLRLGHGFAWILIVVGEM------TGVPEGLGAVIMDGRMLSRTDLVIAGMVVIGIV 252

Query: 566 VLALNRFL 573
             + +R L
Sbjct: 253 GYSTDRIL 260



 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +LP +  ++  R+      + L       L  + + +  +L P L +++ +P+  +L  +
Sbjct: 75  TLPLHLWKSVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPLS 134

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F             AAIF +F    + + F+    +  +   L E +     +G   
Sbjct: 135 MIFFGIG--------PNAAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSL 186

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P +MP ++  + +     W  +V  EM  V +      G+G+ I          
Sbjct: 187 FRQVVLPAAMPSILNGLRLGHGFAWILIVVGEMTGVPE------GLGAVIMDGRMLSRTD 240

Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
            ++  M+ +  V +  D++L      ++ WS 
Sbjct: 241 LVIAGMVVIGIVGYSTDRILVAINNYLLKWSP 272


>gi|322412777|gb|EFY03685.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 575

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F +V+    +     ++  +P      +    +   L +    T   +L A +IS+L  
Sbjct: 54  LFFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  V+ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 16/230 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWI 402
            F +V   A         + +  FT+  +L++   G       T   V+V  +I+ +I I
Sbjct: 54  LFFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVLIGI 113

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     +   + P    +   PA V+    V+      +       +        
Sbjct: 114 PLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + +F  TG +    + LP      + G       A +  +
Sbjct: 170 PTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALSMVV 229

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +           GLG  +  + +        +  L +    + L+R 
Sbjct: 230 TGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|69245959|ref|ZP_00603731.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|293563167|ref|ZP_06677625.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1162]
 gi|294623125|ref|ZP_06702011.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           U0317]
 gi|314939370|ref|ZP_07846611.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|314941573|ref|ZP_07848458.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|314949600|ref|ZP_07852924.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
 gi|314953707|ref|ZP_07856582.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|314992163|ref|ZP_07857607.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|314997654|ref|ZP_07862584.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|68195489|gb|EAN09933.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|281335146|gb|ADA62230.1| Glycine betaine ABC transport system, permease protein OpuAB /
           Glycine betaine ABC transport system, glycine
           betaine-binding protein OpuAC [Enterococcus faecium]
 gi|291597494|gb|EFF28659.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           U0317]
 gi|291604858|gb|EFF34334.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1162]
 gi|313588289|gb|EFR67134.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|313593266|gb|EFR72111.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|313594291|gb|EFR73136.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|313599632|gb|EFR78475.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|313641355|gb|EFS05935.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|313644024|gb|EFS08604.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
          Length = 575

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 55  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|33867016|ref|NP_898575.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102]
 gi|33639617|emb|CAE09001.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102]
          Length = 259

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 11/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + L + +   I++ RV++   +A ++ IPVG+++G    + S + P+ QLL       +
Sbjct: 60  PNDLGIGFNLLISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAW 119

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        N  +    ++   + W  L N   G  +  +D  +VA S   +    
Sbjct: 120 LPIGLFVFR----NSEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNT 175

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +ILP + P  + G   + G AW   + +E+          TG+G +I          
Sbjct: 176 ITKVILPAVMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLYVA 228

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            + + ++I+      L++  
Sbjct: 229 NIFVAIIIIGITGYVLDQIF 248



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L    ++++           S+ +   + P + +++ +  L +L   +  F 
Sbjct: 69  LLISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLPIGLFVFR 128

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N        +E+  IF IF + +W    +    + ++  D+ +V++S   S       + 
Sbjct: 129 N--------SEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVI 180

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  MP ++  M +SM   W  +VA+EM++         GIG +I        +  I  A
Sbjct: 181 LPAVMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLYVANIFVA 233

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +    ++ DQ+ 
Sbjct: 234 IIIIGITGYVLDQIF 248


>gi|257880362|ref|ZP_05660015.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,230,933]
 gi|257882213|ref|ZP_05661866.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,502]
 gi|257891020|ref|ZP_05670673.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,410]
 gi|257894273|ref|ZP_05673926.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,408]
 gi|260562336|ref|ZP_05832850.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           C68]
 gi|257814590|gb|EEV43348.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,230,933]
 gi|257817871|gb|EEV45199.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,502]
 gi|257827380|gb|EEV54006.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,410]
 gi|257830652|gb|EEV57259.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,231,408]
 gi|260073260|gb|EEW61601.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           C68]
          Length = 571

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 51  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 77  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268


>gi|76788447|ref|YP_330414.1| glycine betaine/proline ABC transporter permease/substrate-binding
           protein [Streptococcus agalactiae A909]
 gi|77406685|ref|ZP_00783726.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77412028|ref|ZP_00788356.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|76563504|gb|ABA46088.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptococcus agalactiae A909]
 gi|77161934|gb|EAO72917.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77174704|gb|EAO77532.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 575

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P      +    +   L +    T   +L A +IS++  
Sbjct: 54  LLFIVLITAAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS ++  V+ PILD MQ++P   +L   V +F     G V G   + +FA+ 
Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S SF  +  QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L+++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I              WQ   +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLITAAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271


>gi|227552551|ref|ZP_03982600.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecium TX1330]
 gi|257896894|ref|ZP_05676547.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com12]
 gi|293378476|ref|ZP_06624639.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
 gi|227178300|gb|EEI59272.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus faecium TX1330]
 gi|257833459|gb|EEV59880.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com12]
 gi|292642805|gb|EFF60952.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
          Length = 574

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76
           N+  ++   L I ++ I    I +      +  ++    +    L      T   +L + 
Sbjct: 46  NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   
Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IFA+  +  +         +  +P++L E S SF  +  QK + L +P +   ++  +
Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +       VV + MI         PG+G  +  A++   +       + ++ +  + D
Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270

Query: 257 QL 258
           + 
Sbjct: 271 RF 272



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|293553996|ref|ZP_06674598.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1039]
 gi|291601853|gb|EFF32103.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1039]
          Length = 574

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76
           N+  ++   L I ++ I    I +      +  ++    +    L      T   +L + 
Sbjct: 46  NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   
Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IFA+  +  +         +  +P++L E S SF  +  QK + L +P +   ++  +
Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +       VV + MI         PG+G  +  A++   +       + ++ +  + D
Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270

Query: 257 QL 258
           + 
Sbjct: 271 RF 272



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|24379499|ref|NP_721454.1| putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans UA159]
 gi|290580500|ref|YP_003484892.1| putative proline/glycine betaine ABC transporter permease
           [Streptococcus mutans NN2025]
 gi|24377438|gb|AAN58760.1|AE014944_10 putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans UA159]
 gi|254997399|dbj|BAH88000.1| putative ABC transporter, proline/glycine betaine permease protein
           [Streptococcus mutans NN2025]
          Length = 576

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 98/235 (41%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             ++V+  +       ++ T+P   +  +    +  SL      T   +L +  IS++  
Sbjct: 54  LLLIVLVTLAAFFLARKKWTLPTFTLLGLLFIYN-QSLWDDLVNTFTLVLVSSFISIVIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNNTVKQIINPILDFMQTMPAFVYLIPAVAFFG---IGIVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E + +F  +  QK + + +P +   ++  +  ++   
Sbjct: 170 PTVRF-----TNLAIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +     L ++ +  + D+ 
Sbjct: 225 LSMVVTGSMI-------GAPGLGRGVLSALQHADIGSGFVNGLALVILAIVIDRF 272



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +L I    +         W    + +    +     +      T   V+V   I+ +
Sbjct: 51  VNPLLLIVLVTLAAFFLARKKWTLPTFTLLGLLFIYNQSLWDDLVNTFTLVLVSSFISIV 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   I P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNNTVKQIINPILDFMQTMPAFVYLIPAVAFFGIGIVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E A +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + ++RF
Sbjct: 227 MVVTGSMIG-------APGLGRGVLSALQHADIGSGFVNGLALVILAIVIDRF 272


>gi|21909680|ref|NP_663948.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS315]
 gi|21903863|gb|AAM78751.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes MGAS315]
          Length = 561

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 40  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 98

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 99  IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 155

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 156 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 210

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 211 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 258



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 37  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 96

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 97  IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 152

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 153 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 212

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 213 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 258


>gi|257888218|ref|ZP_05667871.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,141,733]
 gi|257824272|gb|EEV51204.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           1,141,733]
          Length = 575

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76
           N+  ++   L I ++ I    I +      +  ++    +    L      T   +L + 
Sbjct: 46  NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   
Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IFA+  +  +         +  +P++L E S SF  +  QK + L +P +   ++  +
Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +       VV + MI         PG+G  +  A++   +       + ++ +  + D
Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270

Query: 257 QL 258
           + 
Sbjct: 271 RF 272



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|289567008|ref|ZP_06447409.1| ABC transporter, glycine-betaine/proline permease [Enterococcus
           faecium D344SRF]
 gi|294615264|ref|ZP_06695141.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1636]
 gi|294617327|ref|ZP_06696966.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1679]
 gi|289161209|gb|EFD09108.1| ABC transporter, glycine-betaine/proline permease [Enterococcus
           faecium D344SRF]
 gi|291591861|gb|EFF23493.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1636]
 gi|291596400|gb|EFF27654.1| glycine betaine/L-proline ABC transporter,
           substrate-binding/permease protein [Enterococcus faecium
           E1679]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 55  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|261209289|ref|ZP_05923681.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC
           6]
 gi|260076835|gb|EEW64570.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC
           6]
          Length = 571

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 51  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 77  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268


>gi|293570838|ref|ZP_06681885.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E980]
 gi|291609106|gb|EFF38381.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E980]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76
           N+  ++   L I ++ I    I +      +  ++    +    L      T   +L + 
Sbjct: 46  NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   
Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IFA+  +  +         +  +P++L E S SF  +  QK + L +P +   ++  +
Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +       VV + MI         PG+G  +  A++   +       + ++ +  + D
Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270

Query: 257 QL 258
           + 
Sbjct: 271 RF 272



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|293568393|ref|ZP_06679714.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1071]
 gi|291588914|gb|EFF20741.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium E1071]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 55  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|15674389|ref|NP_268563.1| putative glycine-betaine binding permease [Streptococcus pyogenes
           M1 GAS]
 gi|13621479|gb|AAK33284.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes M1 GAS]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|28895060|ref|NP_801410.1| glycine-betaine binding permease protein [Streptococcus pyogenes
           SSI-1]
 gi|28810305|dbj|BAC63243.1| putative glycine-betaine binding permease protein [Streptococcus
           pyogenes SSI-1]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|193077347|gb|ABO12148.2| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii ATCC 17978]
          Length = 284

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A       I    N  T  DV++ +W   
Sbjct: 20  FQQLRSYPPRLKSYVIAFTSIAFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 99/241 (41%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    IN+ +        P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S     + + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|209558734|ref|YP_002285206.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Streptococcus pyogenes NZ131]
 gi|209539935|gb|ACI60511.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Streptococcus pyogenes NZ131]
          Length = 575

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|296111716|ref|YP_003622098.1| betaine ABC transporter permease and substrate binding protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295833248|gb|ADG41129.1| betaine ABC transporter permease and substrate binding protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 568

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 30/262 (11%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77
            L A  + + II + L  +  T           I L +    +L      T   ++ A V
Sbjct: 45  GLTAVPMPLMIIGLTLIAVLTTRKKYGFPIFTFIGLALIANQNLWSDLMSTVTLVIMASV 104

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ISL+       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   +
Sbjct: 105 ISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  M       +  +P  L E + SF  + WQK   L +P +   ++    
Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPIALVEAADSFGSTTWQKLIKLELPNARNTILAGAN 216

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI         PG+G  +  A++  D+ +     L ++ +  + D+
Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQRADVGSGFVNGLGLVILAIIIDR 269

Query: 258 L------------LFRPMIVWS 267
                        + +P   W+
Sbjct: 270 FTQKLNTTPGQKSISKPWRRWA 291



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +  I N   + D++        T+  V++  +I+ +I IP+GI     P  ++ ++P  
Sbjct: 79  GLALIANQNLWSDLMS-------TVTLVIMASVISLVIGIPLGILTAKSPKTAAIVKPIL 131

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +         ++     G    P    E 
Sbjct: 132 DFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPIALVEA 187

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A SF  T W+    + LP      + GA      A +  + + +           GLG  
Sbjct: 188 ADSFGSTTWQKLIKLELPNARNTILAGANQTIMLALSMVVTASMIG-------APGLGRG 240

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  L +    + ++RF
Sbjct: 241 VLSAVQRADVGSGFVNGLGLVILAIIIDRF 270


>gi|56807484|ref|ZP_00365427.1| COG2113: ABC-type proline/glycine betaine transport systems,
           periplasmic components [Streptococcus pyogenes M49 591]
          Length = 452

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   +L A +IS+L         AK+  +  ++ PILD MQ++P   +L  
Sbjct: 9   QGLWKQLMNTFTLVLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIP 68

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++ +IP +L E S +F  +G Q
Sbjct: 69  AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRDIPTELIEASDAFGSTGKQ 120

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  +M      VV   MI         PG+G  +  A++  D+
Sbjct: 121 KLFKVELPLAKNTIMAGVNQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADI 173

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +   + L ++ +  + D++
Sbjct: 174 GSGFVSGLALVILAIVLDRM 193



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   V+V  +I+ +I IP+GIW+     +   + P    +   PA V+    V+      
Sbjct: 18  TFTLVLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGM 77

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +          +          P +  E + +F  TG +    + LP     
Sbjct: 78  VPGVFASVIF----ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 133

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A +  +   +           GLG  +  + +        +  L +   
Sbjct: 134 IMAGVNQTMMLALSMVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVIL 186

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 187 AIVLDRM 193


>gi|52142494|ref|YP_084335.1| sulfonate/taurine ABC transporter permease [Bacillus cereus E33L]
 gi|51975963|gb|AAU17513.1| ABC transporter, permease protein; possible sulfonate/taurine
           transporter [Bacillus cereus E33L]
          Length = 274

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I  +           +     ++  RV+   I+ + + IPVG+ IG  P + +   P   
Sbjct: 59  IAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVIN 118

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   P   F  L +        +       L+ + T + +  N I G  A   D    A
Sbjct: 119 FIRFIPPLAFITLFMLWFGIGEQSK----IFLITYATFFIVTINTITGVQAVEEDKIRSA 174

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   + W+   ++I+P   PY  TGA  A G ++ A + +E+ +         G+G  I
Sbjct: 175 RSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVA------ANEGIGYMI 228

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +        + +G++I+      ++R  
Sbjct: 229 WNARLYFKTDWIFVGLVILGLMGFLMDRIF 258



 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 88/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++          SL  Y   + LR+++  ++          L  +   L  +  
Sbjct: 55  LPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFD 114

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L F+T  +++F           E + IF I  +  + +T +    +  +
Sbjct: 115 PVINFIRFIPPLAFITLFMLWFGIG--------EQSKIFLITYATFFIVTINTITGVQAV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D    +RS   S WQ  +++ +P ++P +     ++M   +  +V +EM+   +    
Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE---- 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  I  A        I   ++ +  + FL D++ 
Sbjct: 223 --GIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258


>gi|262041819|ref|ZP_06015004.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259040811|gb|EEW41897.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 294

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV V   +A++  IP+G  IG     +    P   LL       +
Sbjct: 93  PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVSPLAW 152

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          +      +   + W ++ N   G    P D+  VA    ++ W  
Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            R I+ P + P  +TG   + G AW   + +E+ + G       G+G +I       + 
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261



 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+     ++ L       L  +S     +  P++ +++ +  L +L   
Sbjct: 97  GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVSPLAWLPIG 156

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W  
Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +  P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       ++
Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261


>gi|42782116|ref|NP_979363.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42738040|gb|AAS41971.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 274

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I  +           +     ++  RV+   I+ + + IPVG+ IG  P + +   P   
Sbjct: 59  IAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVIN 118

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   P   F  L +        +       L+ + T + +  N I G  A   D    A
Sbjct: 119 FIRFIPPLAFITLFMLWFGIGEQSK----IFLITYATFFIVTINTITGVQAVEEDKIRSA 174

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   + W+   ++I+P   PY  TGA  A G ++ A + +E+ +         G+G  I
Sbjct: 175 RSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVA------ANEGIGYMI 228

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +        + +G++I+      ++R  
Sbjct: 229 WNARLYFKTDWIFVGLVILGLMGFLMDRIF 258



 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 88/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++          SL  Y   + LR+++  ++          L  +   L  +  
Sbjct: 55  LPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFD 114

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+++ ++ IP L F+T  +++F           E + IF I  +  + +T +    +  +
Sbjct: 115 PVINFIRFIPPLAFITLFMLWFGIG--------EQSKIFLITYATFFIVTINTITGVQAV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D    +RS   S WQ  +++ +P ++P +     ++M   +  +V +EM+   +    
Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVAANE---- 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  I  A        I   ++ +  + FL D++ 
Sbjct: 223 --GIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258


>gi|110678330|ref|YP_681337.1| taurine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109454446|gb|ABG30651.1| taurine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 422

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 229 GYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 288

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     +G S         A S   + W+  RY+I+P   
Sbjct: 289 GESGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSL 344

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +         G G  I  +++  +   V++G++++ 
Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIG 398

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                ++  +      +  R L
Sbjct: 399 VIGFGIDMLM-----RWAERIL 415



 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R++   ++  L           S        PI++ M+ +P L  +   
Sbjct: 223 TLVEHLGYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 282

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++      GK        I  +F + +W M  +    +  +       + S   S WQ 
Sbjct: 283 IIWAGIGESGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQI 334

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             Y+ VP S+P +     ++M   W  VVA+E++          G G  I  A K Q+  
Sbjct: 335 MRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTD 388

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++  ++ +  + F  D L+    R ++ W  K
Sbjct: 389 IVIMGIILIGVIGFGIDMLMRWAERILVPWKGK 421


>gi|332853874|ref|ZP_08435033.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332865984|ref|ZP_08436752.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|332728355|gb|EGJ59734.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332734914|gb|EGJ66001.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 284

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A            N  T  DV++ +W   
Sbjct: 20  FQQLRSYPARLKSYAIAFTSIAFWIVIWQGLAQFKTNLGFVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L     N+          P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKTNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S     + + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|326692454|ref|ZP_08229459.1| ABC-type proline/glycine betaine transport system, permease
           component [Leuconostoc argentinum KCTC 3773]
          Length = 568

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 18/241 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77
            L A  + + I  I L  I  T             L +    +L +    T   ++ A V
Sbjct: 45  GLTAIPMPLMIAGITLIAILTTPKKIGFPAFTFFGLAIVANQNLWEDLMSTLTLVIMASV 104

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ISL+       L AKS +   ++ PILD MQ++P   +L   V +F     G V G   +
Sbjct: 105 ISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  M       +  +P  L E + SF  + WQK   L +P +   ++    
Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTILAGAN 216

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI         PG+G  +  A++  D+       L ++ +  + D+
Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQHADIGLGFVNGLGLVILAIIIDR 269

Query: 258 L 258
            
Sbjct: 270 F 270



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 18/215 (8%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              +  +  + N   ++D++        T+  V++  +I+ +I IP+GI     P  ++ 
Sbjct: 74  AFTFFGLAIVANQNLWEDLMS-------TLTLVIMASVISLVIGIPLGILTAKSPKTAAI 126

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   P  V+    V+      +       +         ++     G    P 
Sbjct: 127 VKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPV 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A SF  T W+    + LP      + GA      A +  + + +           
Sbjct: 183 SLVEAADSFGSTTWQKLIKLELPSARNTILAGANQTIMLALSMVVTASMIG-------AP 235

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + +        +  L +    + ++RF
Sbjct: 236 GLGRGVLSAVQHADIGLGFVNGLGLVILAIIIDRF 270


>gi|184158076|ref|YP_001846415.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874536|ref|ZP_08442439.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209670|gb|ACC57068.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|332737380|gb|EGJ68304.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 284

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A            N  T  DV++ +W   
Sbjct: 20  FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    +N+          P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S       + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|312136841|ref|YP_004004178.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermus fervidus DSM 2088]
 gi|311224560|gb|ADP77416.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermus fervidus DSM 2088]
          Length = 250

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 12/236 (5%)

Query: 340 VSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
              ++ I W  +     I   I       +++ +T      +      T+ RVV+  +IA
Sbjct: 10  SPLLVIILWSLLTFTNIIPNYILPNPGEVLISFYTLIKNGELFVHAYNTLMRVVLGFLIA 69

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S I IP+GI IG+   I +   P  Q+L   P   + P  +        +       ++ 
Sbjct: 70  SAIAIPLGIGIGWSETIENIFNPLIQILRPIPPLAWVPFALIWFGIGLKSE----VFIIF 125

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G+ + IL N +         F E A        +    ++LPG  P  V G     G  
Sbjct: 126 IGSFFPILLNTVDAVKGVEKVFIESAYVLGANEQQILTKVVLPGSLPGIVLGMRVGFGIG 185

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  ++ +E+ +        +GLG  I +S        +++G++ +      ++   
Sbjct: 186 FMCTVAAEMIA------AKSGLGYLIMDSMRLMDTGTMLVGIITIGILGFLIDTIF 235



 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 90/220 (40%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +++      +    L  +A  T +R++   +I+             S  +  +  
Sbjct: 32  LPNPGEVLISFYTLIKNGELFVHAYNTLMRVVLGFLIASAIAIPLGIGIGWSETIENIFN 91

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ I++ IP L ++ F +++F      +        +F IF    + +  +   ++  +
Sbjct: 92  PLIQILRPIPPLAWVPFALIWFGIGLKSE--------VFIIFIGSFFPILLNTVDAVKGV 143

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +   E +     +  Q    + +P S+PG+V  M +    G+   VA+EMI        
Sbjct: 144 EKVFIESAYVLGANEQQILTKVVLPGSLPGIVLGMRVGFGIGFMCTVAAEMIAAKS---- 199

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G  I  +++  D   +L  ++T+  + FL D +  +
Sbjct: 200 --GLGYLIMDSMRLMDTGTMLVGIITIGILGFLIDTIFAK 237


>gi|25011877|ref|NP_736272.1| hypothetical protein gbs1838 [Streptococcus agalactiae NEM316]
 gi|77413910|ref|ZP_00790086.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|24413418|emb|CAD47497.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160043|gb|EAO71178.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 575

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+  + +     ++  +P      +    +   L +    T   +L A +IS++  
Sbjct: 54  LLFIVLITVAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS ++  V+ PILD MQ++P   +L   V +F     G V G   + +FA+ 
Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S SF  +  QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L+++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I    V         WQ   +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLITVAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + SF  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271


>gi|254502502|ref|ZP_05114653.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222438573|gb|EEE45252.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 421

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    ++ S+I IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLLRVCAGFLLGSLIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   +  +   ++I+P   P 
Sbjct: 290 SGK----IILLFLAALWIMTIAARAGVSGVNISKVHAAYSLGASKSQILWHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++      V++G++++   
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGKMIVAASKFQLTDIVIMGIILIGVI 399

Query: 566 VLALNRFLWH 575
             A++  +  
Sbjct: 400 GFAIDVLMRR 409



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L  +   + LR+ +  ++  L           S        PI++ M+ +P L  +   
Sbjct: 222 TLLDHLGWSLLRVCAGFLLGSLIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   S  Q 
Sbjct: 282 IIWFGIGESGK--------IILLFLAALWIMTIAARAGVSGVNISKVHAAYSLGASKSQI 333

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W++ VP S+P +     ++M   W  VVA+E++          G G  I  A K Q   
Sbjct: 334 LWHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGKMIVAASKFQLTD 387

Query: 240 AILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
            ++  ++ +  + F  D L+ R    ++ W  +
Sbjct: 388 IVIMGIILIGVIGFAIDVLMRRAENWLVPWKGR 420


>gi|253689108|ref|YP_003018298.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755686|gb|ACT13762.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 304

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   +     Y    +   + W    ++ RV +   +A+++ IP G  IG    +
Sbjct: 84  WATWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFL 143

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++ + P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 144 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 200 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 255

Query: 535 RTTGLGAYIAESTEKGSF 552
              G+G +I       + 
Sbjct: 256 --VGIGFWIWNEWNNLNV 271



 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 108/279 (38%), Gaps = 24/279 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55
           F Y  L   + + +FP +  L   V V  I  +               +           
Sbjct: 43  FAYRPLLRKLFQPLFPAVLGLGLLVAVWQIAALNSENFPTPWATWLAALSLFADPFYIAG 102

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +      +  R+     ++ L       L  +   L  +L PI+ +++ +  L +
Sbjct: 103 PNDQGIGWNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFLANMLNPIISLLRPVSPLAW 162

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS
Sbjct: 163 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 214

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I      
Sbjct: 215 EFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNN 268

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            ++  I+ A++ +  +  L +Q     ++  +N+F  + 
Sbjct: 269 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 303


>gi|283131336|dbj|BAI63341.1| glycine betaine-binding protein/glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis]
          Length = 540

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P      +    +   L +    T   +L A +IS+L  
Sbjct: 19  LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 77

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  V+ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 78  IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 134

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 135 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 189

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 190 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 237



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    +      +     +      T   V+V  +I+ +
Sbjct: 16  IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 75

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 76  IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 131

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 132 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 191

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 192 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 237


>gi|163732636|ref|ZP_02140081.1| taurine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
 gi|161393996|gb|EDQ18320.1| taurine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
          Length = 422

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 229 GYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 288

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     +G S         A S   + W+  RY+I+P   
Sbjct: 289 GESGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSL 344

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +         G G  I  +++  +   V++G++++ 
Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIG 398

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                ++  +      +  R L
Sbjct: 399 VIGFGIDMLM-----RWAERIL 415



 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R++   ++  L           S        PI++ M+ +P L  +   
Sbjct: 223 TLVEHLGYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 282

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++      GK        I  +F + +W M  +    +  +       + S   S WQ 
Sbjct: 283 IIWAGIGESGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQI 334

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             Y+ VP S+P +     ++M   W  VVA+E++          G G  I  A K Q+  
Sbjct: 335 MRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTD 388

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++  ++ +  + F  D L+    R ++ W  K
Sbjct: 389 IVIMGIILIGVIGFGIDMLMRWAERILVPWKGK 421


>gi|258614687|ref|ZP_05712457.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Enterococcus
           faecium DO]
          Length = 560

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L++ +    +   +       ++ +  I      L      T   +L + VIS++  
Sbjct: 55  LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L AKS +   ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P++L E S SF  +  QK + L +P +   ++  +  +    
Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +       + ++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +       S I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|239501805|ref|ZP_04661115.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii AB900]
          Length = 284

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A            N  T  DV++ +W   
Sbjct: 20  FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVV   ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSAAFEHVESSVFRVVFGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    +N+          P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVFGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S       + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|313890394|ref|ZP_07824025.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121237|gb|EFR44345.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 575

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   T   +L A +IS++         AKS  +  ++ PILD MQ++P   +L  
Sbjct: 88  QGLWEHLINTFTLVLVASLISIIIGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V GA  + IFA+  +  +         + NI  +L E S +F  +  Q
Sbjct: 148 AVAFFG---IGMVPGAFASVIFALPPTVRF-----TNLGISNISTELVEASDAFGSTPRQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   + +P +   ++  +  +M      VV   MI         PG+G  +  A++  D+
Sbjct: 200 KLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADV 252

Query: 239 LAILYAMLTMLGVIFLYDQ 257
                + L ++ +  + D+
Sbjct: 253 GTGFVSGLALVILAIILDR 271



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I              W    +      +     +      T   V+V  +I+ I
Sbjct: 51  INPLLFIVLVTAAVFFLAKKKWPLATFTFLGLLFIYNQGLWEHLINTFTLVLVASLISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGAFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G S    +  E + +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLGISNISTELVEASDAFGSTPRQKLLKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADVGTGFVSGLALVILAIILDR 271


>gi|325122146|gb|ADY81669.1| nitrate ABC transporter, permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 284

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 103/248 (41%), Gaps = 20/248 (8%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------I 385
            N  ++++  +FW  +  G+A       I    N  T  DV++ +W              
Sbjct: 31  KNYAIAFISIVFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVES 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +       
Sbjct: 91  SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSE 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +   G  + IL N + G  A    F   A S   +       +I+PG  P 
Sbjct: 151 AS----MIFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPN 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G  W   + +E+ S         G+G +  ES    ++  +V+G++++   
Sbjct: 207 IITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGAL 260

Query: 566 VLALNRFL 573
            +  +  +
Sbjct: 261 GMFSSTLV 268



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    IN+ +        P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +       ++S   S       + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|293395630|ref|ZP_06639913.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
 gi|291421949|gb|EFE95195.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
          Length = 299

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 17/238 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG----IAWQSIGYIVNHFTY--- 373
                 + + F ++        ++   W                WQ+   +     Y   
Sbjct: 38  PRSSLRWQQAFRRVVPAALGMVLVLAVWQIAALNSQGFPTPLATWQAALTLFADPFYSAG 97

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   + W    ++ RV     +A+++ IP G  +G    ++  + P   LL       +
Sbjct: 98  PNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAW 157

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +                 +   + W ++ N   G +  P D+  VA    ++ W  
Sbjct: 158 LPIGLLLFQRAEPASTWT----IFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTV 213

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            R I+ P + P+ +TG   + G AW   + +E+ + G       G+G +I       +
Sbjct: 214 MRKILFPAVLPFVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLN 265



 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 88/231 (38%), Gaps = 20/231 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYAS 66
           RR+ P    ++  + V  I  +   G        +  +            +   +     
Sbjct: 49  RRVVPAALGMVLVLAVWQIAALNSQGFPTPLATWQAALTLFADPFYSAGPNDQGIGWNVL 108

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+ +   ++ L       L  +   L  +L PI+ +++ +  L +L   ++ F   
Sbjct: 109 ASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAWLPIGLLLFQRA 168

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS W     +  P
Sbjct: 169 EP--------ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFP 220

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             +P ++  + +S+   W  +VA+EM+  G       GIG +I       +
Sbjct: 221 AVLPFVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLN 265


>gi|332522360|ref|ZP_08398612.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313624|gb|EGJ26609.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 575

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   T   +L A +IS++         AKS  +  ++ PILD MQ++P   +L  
Sbjct: 88  QGLWEHLINTFTLVLVASLISIIIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         + NI  +L E S +F  +  Q
Sbjct: 148 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGISNISTELVEASDAFGSTPRQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   + +P +   ++  +  +M      VV   MI         PG+G  +  A++  D+
Sbjct: 200 KLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADI 252

Query: 239 LAILYAMLTMLGVIFLYDQ 257
                + L ++ +  + D+
Sbjct: 253 GTGFVSGLALVILAIILDR 271



 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 13/274 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +          L++    L   L  I  +  +    +         + +    V      
Sbjct: 11  VAKLVEKLTEWLTHTFSGLFNFLQTIGSYVMDWITSVLLFINPLLFIVLVTAAVFFLAKK 70

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                +  ++   F Y   L+   +   T+  V+V  +I+ II IP+GIW+     +   
Sbjct: 71  KWPLATFTFLGLLFIYNQGLWEHLINTFTL--VLVASLISIIIGIPLGIWMAKSATVRQI 128

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    +   PA V+    V+      +       +          +     G S    
Sbjct: 129 VNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGISNIST 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E + +F  T  +    + LP      + G       A +  +   +           
Sbjct: 185 ELVEASDAFGSTPRQKLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMIG-------AP 237

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           GLG  +  + +        +  L +    + L+R
Sbjct: 238 GLGREVLSALQHADIGTGFVSGLALVILAIILDR 271


>gi|227326127|ref|ZP_03830151.1| nitrate transporter permease component [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 305

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 13/258 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           I        +P             ++R  F + F  +     +  +  I           
Sbjct: 25  ITPLPTKPATPAKVPAAPAFAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTP 84

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   +     Y    +   + W    ++ RV +   +A+++ IP G  IG    +
Sbjct: 85  WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 144

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++ + P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 145 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 200

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 201 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 256

Query: 535 RTTGLGAYIAESTEKGSF 552
              G+G +I       + 
Sbjct: 257 --VGIGFWIWNEWNNLNV 272



 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 109/279 (39%), Gaps = 24/279 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55
           F Y  L   + +++FP +  L   V V  I  +               +           
Sbjct: 44  FAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAG 103

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +      +  R+     ++ L       L  +   L  +L PI+ +++ +  L +
Sbjct: 104 PNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAW 163

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS
Sbjct: 164 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 215

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I      
Sbjct: 216 EFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNN 269

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            ++  I+ A++ +  +  L +Q     ++  +N+F  + 
Sbjct: 270 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 304


>gi|323128141|gb|ADX25438.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 575

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P      +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  V+ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    +      +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|251783394|ref|YP_002997699.1| glycine betaine-binding protein/glycinebetaine transport system
           permease [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242392026|dbj|BAH82485.1| glycine betaine-binding protein/glycinebetaine transport system
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 575

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P      +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  V+ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    +      +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|154247972|ref|YP_001418930.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154162057|gb|ABS69273.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 273

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 18/227 (7%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406
            A+ + W +    +  +      Y+ WL           ++ RV +   + + + +P+G+
Sbjct: 41  AAVAVRWWAYLAPMEAYDPAAGSYLAWLFSGEMIHDAIGSLTRVALGFFVGAGLALPLGL 100

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           ++G    I   I P  Q+L   P   + PL +          N     L+  G  + +L 
Sbjct: 101 FMGSSDTIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N IAG       +   A S   +    +R +ILP   PY ++GA    G A+   IV+E+
Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         GLG  I E+ E     +++ G+  +    LA++  +
Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMFTIGLLGLAIDMAV 257



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 82/240 (34%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+     +         P +  D    +    L    +   A  +  R+     +   
Sbjct: 34  PMVLPSPAAVAVRWWAYLAPMEAYDPAAGSYLAWLFSGEMIHDAIGSLTRVALGFFVGAG 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +   + P++ +++ IP + ++  ++++F              A+F 
Sbjct: 94  LALPLGLFMGSSDTIYRHINPLMQVLRPIPPIAYIPLSILWFGLG--------NAPAVFL 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +RS   S    F  + +P + P ++    + + 
Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPYILSGARIGIG 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V +      G+G  I  A +      I+  M T+  +    D  + R
Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMFTIGLLGLAIDMAVSR 259


>gi|299770270|ref|YP_003732296.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp.
           DR1]
 gi|298700358|gb|ADI90923.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp.
           DR1]
          Length = 284

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++   +FW  V  G+A       I    N  T  DV++ +W   
Sbjct: 20  FQQLRSYPAHLKSYVIAFTSIVFWIAVWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVVV  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P   TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 YEVIIPGALPNITTGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           IN+ +        P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  INLGIVNFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F          +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S     + + +P ++P +   + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNITTGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI          GIG +   +   Q+   I+  M+ +  +      L+
Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268


>gi|188580473|ref|YP_001923918.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343971|gb|ACB79383.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 273

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 18/224 (8%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406
            A+   W +    +  +      + +WL           +++RVVV  ++ + + +P+G+
Sbjct: 41  AAVAARWWAYLAPLEAYDPAQGSWFLWLFSGEMLHDALASLYRVVVGFLVGAGLALPLGL 100

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           ++G    I   I P  Q+L   P   + PL +          N     L+  G  + +L 
Sbjct: 101 FMGTSDVIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N IAG       +   A S   +    +R +ILP   PY ++GA    G A+   IV+E+
Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +         GLG  I E+ E     +++ G+L +    L ++
Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMLTIGALGLIID 254



 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 86/240 (35%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+     +         P +  D    +    L    +   A  +  R++   ++   
Sbjct: 34  PMVLPSPAAVAARWWAYLAPLEAYDPAQGSWFLWLFSGEMLHDALASLYRVVVGFLVGAG 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +   + P++ +++ IP + ++  ++++F              A+F 
Sbjct: 94  LALPLGLFMGTSDVIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +RS   S    F  + +P + P ++    + + 
Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V +      G+G  I  A +      I+  MLT+  +  + D  + R
Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLIIDMGVSR 259


>gi|310640756|ref|YP_003945514.1| glycine betaine abc transporter permease protein [Paenibacillus
           polymyxa SC2]
 gi|309245706|gb|ADO55273.1| Glycine betaine ABC transporter permease protein [Paenibacillus
           polymyxa SC2]
          Length = 864

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 22/243 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F+++IGII  ++  +Q T     ++  + I  D          T   ++++ ++S++ 
Sbjct: 50  LVFIVIIGIIAFMIGRVQLTL--FTVIGFLLI--DNLGYWSETMNTLGLVITSALVSIVI 105

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A S+    ++ P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 106 GIPIGIWCAYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +  +L E S +F  +  QK + + +P ++P L+  +  ++  
Sbjct: 163 P-----PTIRMTNLGIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIML 217

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               VV + MI          GIG+ +  A+ +  +     A L ++ +  + D+    L
Sbjct: 218 SLSMVVIASMI-------GAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNL 270

Query: 260 FRP 262
           F+P
Sbjct: 271 FKP 273



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 13/226 (5%)

Query: 349 FCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F V+ G+   +    Q   + V  F   D L        T+  V+   +++ +I IP+GI
Sbjct: 52  FIVIIGIIAFMIGRVQLTLFTVIGFLLIDNLGYWSETMNTLGLVITSALVSIVIGIPIGI 111

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W  +    S  I P    +   PA V+    +  V+++ L     +   +IF      + 
Sbjct: 112 WCAYSKSASRIITPLLDFMQTMPAFVYL---LPAVTFFSLGVVPGVIASVIF-AIPPTIR 167

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G     ++  E + +F  T  +    + LP   P  + G       + +  +++ +
Sbjct: 168 MTNLGIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLSMVVIASM 227

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                      G+GA +  +  +    +     L +    + L+RF
Sbjct: 228 IG-------AEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRF 266


>gi|260555053|ref|ZP_05827274.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260411595|gb|EEX04892.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 284

 Score =  141 bits (357), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A            N  T  DV++ +W   
Sbjct: 20  FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFGNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    +N+          P D++  +     + +  ++   +  R++   V+
Sbjct: 42  FWIVIWQGLAQFKVNLGFVNFGNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S       + +P ++P ++  + +
Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|77459382|ref|YP_348889.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77383385|gb|ABA74898.1| putative transport system permease [Pseudomonas fluorescens Pf0-1]
          Length = 274

 Score =  141 bits (357), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 10/224 (4%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  V        +  I       D   +I     ++ RV    + A +I I +G+ IG  
Sbjct: 46  LGLVTFANVPTPLAVIEAALGLGDSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRS 105

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 + P  ++L   PA  + PL +       L+    +  +   G  + IL N + G
Sbjct: 106 KWAEDLLLPPLEVLRPIPAVAWIPLAILMFPSSELS----MVFITFTGALFPILLNTVHG 161

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                      A S           +ILPG  P  +TG     G +W   + +E+ S   
Sbjct: 162 VEGVDPRLIASAKSLGAGRRAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISG-- 219

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 G+G Y  ES    ++ ++V+G+L++    +  +  +  
Sbjct: 220 ----QFGIGYYTWESYTIQNYADIVVGMLLIGVLGMGSSLLIKR 259



 Score =  130 bits (327), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 99/262 (37%), Gaps = 24/262 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQET----------TVPRDIVDIVPITLDVH 59
           F S +I    +   A  +   ++   L                  P  +++      D  
Sbjct: 12  FRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAVIEAALGLGDSG 71

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L Q+ S +  R+ +  + +L+          +S+    +L+P L++++ IP + ++   
Sbjct: 72  KLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLA 131

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F          +EL+ +F  FT  ++ +  +    +  +   L   ++S        
Sbjct: 132 ILMF--------PSSELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGRRAI 183

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + + M   WF +V +EMI          GIG Y   +   Q+  
Sbjct: 184 LLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTIQNYA 237

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
            I+  ML +  +      L+ R
Sbjct: 238 DIVVGMLLIGVLGMGSSLLIKR 259


>gi|257899649|ref|ZP_05679302.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com15]
 gi|257837561|gb|EEV62635.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium
           Com15]
          Length = 575

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 16/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76
           N+  ++   L I ++ I    I +      +  ++    +    L      T   +L + 
Sbjct: 46  NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++       L AKS +  +++ PILD MQ++P   +L   V +F     G V G   
Sbjct: 106 VISIIIGVPLGILMAKSSKAQIIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IFA+  +  +         +  +P++L E S SF  +  QK + L +P +   ++  +
Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +       VV + MI         PG+G  +  A++   +       + ++ +  + D
Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270

Query: 257 QL 258
           + 
Sbjct: 271 RF 272



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 71/210 (33%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I N   + D++        T+  V++  +I+ II +P+GI +         I+P  
Sbjct: 81  GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQIIIKPIL 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +          +     G    P +  E 
Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + SF  T  +    + LP      + G       + +  +++ +           GLG  
Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  + +    + ++RF
Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272


>gi|300172857|ref|YP_003772022.1| OpuABC protein [Leuconostoc gasicomitatum LMG 18811]
 gi|299887235|emb|CBL91203.1| OpuABC [Leuconostoc gasicomitatum LMG 18811]
          Length = 568

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 30/262 (11%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77
            L A  + + I  + +  I  T           I L +    +L      T   ++ A V
Sbjct: 45  GLTAIPMPLMIAGLTVIAILTTPKKYGFPLFTLIGLALIANQNLWSDLMSTVTLVIMASV 104

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ISL+       + AKS +   ++ PILD MQ++P   +L   V +F     G V G   +
Sbjct: 105 ISLVIGIPLGIITAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  M       +  +P  L E + SF  + WQK   L +P +   ++    
Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPVALVEAADSFGSTTWQKLIKLELPNARNTILAGAN 216

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI         PG+G  +  A++  D+ +     L ++ +  + D+
Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQRADVGSGFVNGLGLVILAIIIDR 269

Query: 258 L------------LFRPMIVWS 267
                          RP   W+
Sbjct: 270 FTQKLNTKPGQKVATRPWRRWA 291



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 18/210 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +  I N   + D++        T+  V++  +I+ +I IP+GI     P  ++ ++P  
Sbjct: 79  GLALIANQNLWSDLMS-------TVTLVIMASVISLVIGIPLGIITAKSPKTAAIVKPIL 131

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   P  V+    V+      +       +         ++     G    P    E 
Sbjct: 132 DFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPVALVEA 187

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A SF  T W+    + LP      + GA      A +  + + +           GLG  
Sbjct: 188 ADSFGSTTWQKLIKLELPNARNTILAGANQTIMLALSMVVTASMIG-------APGLGRG 240

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + ++       +  L +    + ++RF
Sbjct: 241 VLSAVQRADVGSGFVNGLGLVILAIIIDRF 270


>gi|126740663|ref|ZP_01756349.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
 gi|126718178|gb|EBA14894.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
          Length = 654

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 89/536 (16%), Positives = 173/536 (32%), Gaps = 44/536 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L V    + A  T   +L A+ I      +    A +      +L PILD+MQ+IPI 
Sbjct: 132 IYLAVFGQWESAMVTLASVLIAVPIGAGGGLMAGIWAYRHPLGERILSPILDLMQTIPIF 191

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   +  F            ++A+ A        M      +L  +  ++ +  R   
Sbjct: 192 AYLVPILFMFG--------FGPVSALVATIIYATPPMIRITILALKAVDPEILDFGRMAG 243

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +  Q  W + VP +   L+  +   +      V+ + MI  G       G+G  +  A+
Sbjct: 244 TTERQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAAL 296

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL---LFRPM--------IVWSNKFRLERTTGIYPAD 282
           +  D+ A   A + ++ +    D+L       M          W  + +         A 
Sbjct: 297 RRLDIGAGFEAGIAIVVLAIAVDRLSQAFAERMGQIQHVQPGSWLARHKRTALVTTLLAV 356

Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY 342
           +WVL  F  +  L     S         N+  K         F   + F        +  
Sbjct: 357 TWVLGQF--SPLLLTYPESQTITTGVFWNDTVKYLNVNYFDLFEAVKVFFLHWFLLPIKK 414

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    +     +   + W+  G  +          ++  G      IT++     +I+A
Sbjct: 415 VLLGLPWPWAIAMLSLLGWRIGGAKLALLCAALSTLILISGLWSKAMITVYLCGASVILA 474

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           ++I +P+G+         + +      L   P+ V+   VV           + + L  +
Sbjct: 475 TLIGVPLGVLAALNRRAGAVVNLLIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIVLYAL 534

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                Y       G      +  E       T W+  R + LP   P  + G       A
Sbjct: 535 APAVRY----AAHGVRNINEELIEAGLVSGCTKWQLLRLVRLPLALPEILLGINQTIMLA 590

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +  +++ +            LG  +  +  K      ++  L +    +  +R +
Sbjct: 591 LSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFVAIIADRLI 639


>gi|222153813|ref|YP_002562990.1| glycine-betaine binding permease [Streptococcus uberis 0140J]
 gi|222114626|emb|CAR43642.1| putative glycine-betaine binding permease protein [Streptococcus
           uberis 0140J]
          Length = 575

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 16/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +++  + +     ++  +P      +    +   L  +   T   +L A  IS++  
Sbjct: 54  LLFILLVTVAVYFLARKKWPLPVFTFLGLLFIYNQG-LWVHLINTFTLVLVASFISIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKSSTVRHIINPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  I ++L E S +F  +  QK   + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLGIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV   MI         PG+G  +  A++  D+     + L ++ +  + D+
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLALVILAIVLDR 271



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I    V         W    +      +     +      T   V+V   I+ I
Sbjct: 51  INPLLFILLVTVAVYFLARKKWPLPVFTFLGLLFIYNQGLWVHLINTFTLVLVASFISII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   I P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKSSTVRHIINPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G      +  E + +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLGIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   +           GLG  +  + +        +  L +    + L+R
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLALVILAIVLDR 271


>gi|71902822|ref|YP_279625.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS6180]
 gi|71801917|gb|AAX71270.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS6180]
          Length = 575

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGVFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADVGSGFVSGLALVILAIVLDRM 272



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGVFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADVGSGFVSGLALVILAIVLDRM 272


>gi|260554118|ref|ZP_05826379.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Acinetobacter sp. RUH2624]
 gi|260404746|gb|EEW98255.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Acinetobacter sp. RUH2624]
          Length = 284

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    ++     +  +++    FW  +  G+A            N  T  DV++ +W   
Sbjct: 20  FRQLRSYPARLKSYVIAFTSIAFWIAIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++FRVV+  ++A++I + +G+  G    +++ + P  ++L   PA  + 
Sbjct: 80  QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +    +  +   G  + IL N + G  A        A S   +     
Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I+PG  P  +TG     G  W   + +E+ S         G+G +  ES    ++  
Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++++    +  +  +
Sbjct: 250 IVVGMVLIGALGMFSSTLV 268



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 93/228 (40%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+          P D++  +     + +  ++   +  R++   V++ L       LA 
Sbjct: 55  VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAG 114

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + ++L   L+P L++++ IP + ++   ++ F          +E + IF  F   ++ + 
Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   S       + +P ++P ++  + + M   WF +V +E
Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI          GIG +   +   Q+   I+  M+ +  +      L+
Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268


>gi|307331451|ref|ZP_07610568.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptomyces violaceusniger Tu 4113]
 gi|306882894|gb|EFN13963.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptomyces violaceusniger Tu 4113]
          Length = 872

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+   I  LL       +P  +  +    +D   L   A  T   +L A VI+++F   
Sbjct: 48  PLLFAGILALLAWWLRGLLPAVLAFLGFALIDSIELWGEAMNTLALVLVAGVITIVFAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A+++R +  V+ P+LD MQ++P   +L   + +F     G V G     IF++   
Sbjct: 108 LGIWASRNRAVSAVIRPVLDFMQTMPAFVYLIPGIFFFGL---GVVPGVVATVIFSMPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F     +    +  P ++P ++  +   +     
Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQFPLALPTIMAGVNQVIMLALS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+          G+GS +  AI   D+       + ++ +    D++
Sbjct: 220 MVVIAGMV-------GAEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +  G+   +AW   G +        F   D + +      T+  V+V  +I  +  +P+
Sbjct: 49  LLFAGILALLAWWLRGLLPAVLAFLGFALIDSIELWGEAMNTLALVLVAGVITIVFAVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S+ I+P    +   PA V+    +  + ++ L     +   +IF +    
Sbjct: 109 GIWASRNRAVSAVIRPVLDFMQTMPAFVYL---IPGIFFFGLGVVPGVVATVIF-SMPPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F     R    +  P   P  + G       A +  +++
Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQFPLALPTIMAGVNQVIMLALSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           GLG+ + ++           G + +    + L+R 
Sbjct: 225 GMVG-------AEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265


>gi|254456657|ref|ZP_05070086.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083659|gb|EDZ61085.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 641

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV + ++   II +P+G+++G          P  +L    P   + PL++S +    
Sbjct: 450 SFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISVLGI-- 507

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N     L+   +   ++ +  AGAS         A S   +  +  RY+I P   P 
Sbjct: 508 --DNTGKIFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRYVIFPNSLPE 565

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E  +       TTG+G     + +   +  + + + IM   
Sbjct: 566 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIGFVENVAKKYFQYEVIWITIFIMGML 619

Query: 566 VLALNRFLWH 575
            L  +  L  
Sbjct: 620 GLLFDVTLRK 629



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   + LR+   +V  ++           +R       P++++ + +P L +    +  
Sbjct: 445 GHIWDSFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISV 504

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                 GK        IF +F   +  M  S               + S   S  Q   Y
Sbjct: 505 LGIDNTGK--------IFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRY 556

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P S+P ++  + +++   W  +VA+E +          GIG    +A K      I 
Sbjct: 557 VIFPNSLPEILTGIRVAVGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIW 610

Query: 243 YAMLTMLGVIFLYDQLLFR---PMIVWSNK 269
             +  M  +  L+D  L +     I W  K
Sbjct: 611 ITIFIMGMLGLLFDVTLRKLIDRYIPWRGK 640


>gi|261820839|ref|YP_003258945.1| nitrate ABC transporter inner membrane protein [Pectobacterium
           wasabiae WPP163]
 gi|261604852|gb|ACX87338.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium
           wasabiae WPP163]
          Length = 304

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 86/221 (38%), Gaps = 14/221 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   +     Y    +   + W    ++ RV +   +A+++ IP G  IG    +
Sbjct: 84  WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 143

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++ + P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 144 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +     I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 200 IPQDYLNVARVLKLSEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 255

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR-FLW 574
              G+G +I       +   +++ ++++    L L +  +W
Sbjct: 256 --VGIGFWIWNEWNNLNVENIIIAIVVIGVIGLLLEQGLVW 294



 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 110/280 (39%), Gaps = 24/280 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPI 54
           +F Y  L   + +++FP +  L   V V  I  +               +          
Sbjct: 42  VFAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIA 101

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             +   +      +  R+     ++ L       L  +   L  +L PI+ +++ +  L 
Sbjct: 102 GPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLA 161

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +L
Sbjct: 162 WLPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKL 213

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +     + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I     
Sbjct: 214 SEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWN 267

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
             ++  I+ A++ +  +  L +Q     ++  +N+F  + 
Sbjct: 268 NLNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 303


>gi|147920986|ref|YP_685204.1| putative ABC-type sulfonate import system, permease component
           [uncultured methanogenic archaeon RC-I]
 gi|110620600|emb|CAJ35878.1| putative ABC-type sulfonate import system, permease component
           [uncultured methanogenic archaeon RC-I]
          Length = 257

 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 94/248 (37%), Gaps = 13/248 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVLYVIWLGCI 385
               ++        +L + W      + +    I       ++          +      
Sbjct: 2   SRVSKILMQLSGILILIVVWQVATGVLGLVKPVILPPPSDVLLTTIDMVMDGELFMHAGY 61

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++  + A ++ +P+GI +G+   IS  + P  ++L   P   +  L +   +   
Sbjct: 62  SLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEVLRPIPPIAWIGLALLWFNIGL 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+  G  + IL N ++G         EVA +F  T +   R +++P   P 
Sbjct: 122 TS----AVFLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALPT 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G  W   + +E+ +         GLG  I E++      +V++G++++   
Sbjct: 178 IYTGMRVGMGIGWMCVVAAEMVA------VKFGLGNLILEASNFLQTDKVLVGMIMIGIL 231

Query: 566 VLALNRFL 573
            L +N   
Sbjct: 232 GLLINVAF 239



 Score =  126 bits (318), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 107/251 (42%), Gaps = 23/251 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV------HSLPQYASRTTLRMLSAMVIS 79
           +L++ ++  +  G+     P  +     + L          L  +A  + LR++   + +
Sbjct: 14  ILILIVVWQVATGVLGLVKPVILPPPSDVLLTTIDMVMDGELFMHAGYSLLRVILGFLAA 73

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++            R +  V+ P++++++ IP + ++   +++F             +A+
Sbjct: 74  VVVAVPLGIAMGWVREISYVVDPVIEVLRPIPPIAWIGLALLWFNIGLT--------SAV 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +F   V+ +  +    + N+ R L EV+ +F  + ++    + +P ++P +   M + 
Sbjct: 126 FLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALPTIYTGMRVG 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
           M  GW  VVA+EM+ V        G+G+ I  A        +L  M+ +  +  L +   
Sbjct: 186 MGIGWMCVVAAEMVAVK------FGLGNLILEASNFLQTDKVLVGMIMIGILGLLINVAF 239

Query: 257 QLLFRPMIVWS 267
           Q++   +  W 
Sbjct: 240 QIVGDRIFAWQ 250


>gi|311108302|ref|YP_003981155.1| nitrate ABC transporter permease [Achromobacter xylosoxidans A8]
 gi|310762991|gb|ADP18440.1| nitrate ABC transporter, permease protein [Achromobacter
           xylosoxidans A8]
          Length = 276

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 17/254 (6%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTY-- 373
           + + R         +        +  + W  V   +      G+ W++   + +   Y  
Sbjct: 14  IALWRERLELALRAVVGPVAGFALFVLVWQVVALRIPEIPTPGVTWRAAVELFSDPFYDN 73

Query: 374 -QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   + W    ++ RV +   +A++I IP G  IG    + +   P   LL       
Sbjct: 74  GPNDKGIGWNLLASLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLRPVSPLA 133

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                +          N      +   + W ++ N   G S  P D+  VA   +++ W+
Sbjct: 134 ----WLPLGLLLFKAANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWK 189

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LP + PY +TG   + G AW   + +E+ + G      TG+G ++ +       
Sbjct: 190 VTTKVLLPAVLPYVLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKV 243

Query: 553 PEVVLGVLIMCCFV 566
             +V+ + ++    
Sbjct: 244 EHIVIAIFVIGIVG 257



 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 24/248 (9%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQY 64
           R +   +     FVLV  ++ + +  I   T        V +  D           +   
Sbjct: 26  RAVVGPVAGFALFVLVWQVVALRIPEI--PTPGVTWRAAVELFSDPFYDNGPNDKGIGWN 83

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     ++ L          +   +  +  PI+ +++ +  L +L   ++ F 
Sbjct: 84  LLASLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLRPVSPLAWLPLGLLLFK 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AAI+AIF   +W M  +    +  +P+D   V+R   LS W+    + 
Sbjct: 144 AANP--------AAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVL 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +P ++  + +S+   W  +VA+EM+  G       GIG ++        +  I+ A
Sbjct: 196 LPAVLPYVLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIA 249

Query: 245 MLTMLGVI 252
           +  +  V 
Sbjct: 250 IFVIGIVG 257


>gi|282165192|ref|YP_003357577.1| ABC transporter permease protein [Methanocella paludicola SANAE]
 gi|282157506|dbj|BAI62594.1| ABC transporter permease protein [Methanocella paludicola SANAE]
          Length = 258

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 10/209 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
              +   +      +      ++ RV++  ++A+++ IP+G+ +G+ P IS    P  ++
Sbjct: 41  DVFMTMLSMALDGSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPVIEV 100

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   +  L +        +       L+  G  + IL N I G         EVA 
Sbjct: 101 IRPIPPIAWIGLALLWFGIGLNS----AIFLVFIGAFFPILLNTIDGVRNVDKRLIEVAY 156

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F    W   R ++LP   P   TG     G  W   + +E+ +         GLG  I 
Sbjct: 157 TFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIA------VKFGLGNMIL 210

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           E +       V++G+L +    LA+N   
Sbjct: 211 EGSNLLQTDVVMVGMLTIGLMGLAINYIF 239



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 14/224 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L        P D+   +       SL   A  + LR+L   +++ +              
Sbjct: 30  LFKWIVLPPPTDVFMTMLSMALDGSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPS 89

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + +V  P++++++ IP + ++   +++F             +AIF +F    + +  +  
Sbjct: 90  ISLVFDPVIEVIRPIPPIAWIGLALLWFGIGL--------NSAIFLVFIGAFFPILLNTI 141

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + N+ + L EV+ +F    W     + +P + P +   M + M  GW  VVA+EMI V
Sbjct: 142 DGVRNVDKRLIEVAYTFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIAV 201

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   G+G+ I           ++  MLT+  +    + + 
Sbjct: 202 K------FGLGNMILEGSNLLQTDVVMVGMLTIGLMGLAINYIF 239


>gi|317404717|gb|EFV85106.1| NrtB protein [Achromobacter xylosoxidans C54]
          Length = 242

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 13/219 (5%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           G+ WQ+   + +   Y    +   + W    ++ RV +   +A+++ IPVG  IG    +
Sbjct: 22  GVTWQAAVALFSDPFYDNGPNDKGIGWNLLASLQRVGIGFGLAALVGIPVGFAIGRYAPV 81

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            +   P   LL            +          N      +   + W ++ N   G S 
Sbjct: 82  RAMFSPIVSLLRPVSPLA----WLPLGLLLFKAANPAAIWAIFICSIWPMIINTAVGVSR 137

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA   +++ W+    ++LP + PY +TG   + G AW   + +E+ + G    
Sbjct: 138 VPQDYLNVARVLNLSEWKVTTKVLLPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 193

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             TG+G ++ +         +V+ + ++    L L   L
Sbjct: 194 --TGIGFWLWDEWNNLKVEHIVIAIFVIGIVGLILETLL 230



 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 24/259 (9%)

Query: 22  LLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              FVLV  ++ + +  I       +  V            +   +      +  R+   
Sbjct: 1   FALFVLVWQVVAMRIPEIPTPGVTWQAAVALFSDPFYDNGPNDKGIGWNLLASLQRVGIG 60

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             ++ L          +   +  +  PI+ +++ +  L +L   ++ F    P       
Sbjct: 61  FGLAALVGIPVGFAIGRYAPVRAMFSPIVSLLRPVSPLAWLPLGLLLFKAANP------- 113

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AAI+AIF   +W M  +    +  +P+D   V+R   LS W+    + +P  +P ++  
Sbjct: 114 -AAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYMLTG 172

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S+   W  +VA+EM+  G       GIG ++        +  I+ A+  +  V  + 
Sbjct: 173 VRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFVIGIVGLIL 226

Query: 256 DQLLFRPMIVWSNKFRLER 274
           + L    ++  + +F    
Sbjct: 227 ETL----LVALARRFTYTE 241


>gi|116749646|ref|YP_846333.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698710|gb|ABK17898.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 314

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 10/191 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + +     +M R+ +  +IA +I IP+G+ +G+     +   P  + L   P   + PL 
Sbjct: 115 HCLMCVIFSMGRIYLGFMIACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLS 174

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V        +    +  L+  G  + I+ N + G  +   D+ + A S        +  I
Sbjct: 175 VIMFPLTEHS----IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDI 230

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPG  P   TG     G AW   + +E+ + G+      GLG    ES    ++P ++L
Sbjct: 231 ILPGALPSIFTGMTVGMGLAWVMVVAAEMVAGGY------GLGYMTWESYILIAYPRIIL 284

Query: 558 GVLIMCCFVLA 568
           G+ I+      
Sbjct: 285 GMFIIGACGYL 295



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 86/242 (35%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           I  L+  V++  ++    +        P ++       +           +  R+    +
Sbjct: 73  ILSLVIIVILWQLVTTYKIPPFTRVPSPNEVWKEAVAFIPSTHCLMCVIFSMGRIYLGFM 132

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+ L       +   +R       P  + ++ IP++ ++  +V+ F           E +
Sbjct: 133 IACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLSVIMF--------PLTEHS 184

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F +F    + +  +    + ++  D  + + S        F+ + +P ++P +   M 
Sbjct: 185 IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDIILPGALPSIFTGMT 244

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + M   W  VVA+EM+  G       G+G     +        I+  M  +    +L   
Sbjct: 245 VGMGLAWVMVVAAEMVAGG------YGLGYMTWESYILIAYPRIILGMFIIGACGYLSST 298

Query: 258 LL 259
           +L
Sbjct: 299 VL 300


>gi|160897817|ref|YP_001563399.1| nitrate ABC transporter inner membrane subunit [Delftia acidovorans
           SPH-1]
 gi|160363401|gb|ABX35014.1| nitrate ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 313

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV V   +A+++ IP G  IG    +S    P   LL       + P+ +
Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLPIGL 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N      +   + W +L N   G    P D+  VA   +++ W+    I+
Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   A G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 284

Query: 559 VLIMCCFVLALNRFL 573
           + ++    L L   L
Sbjct: 285 IFVIGIVGLLLEMAL 299



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 14/205 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+     ++ L       +  +   L  +  P++ +++ +  L +L   ++ 
Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLPIGLLV 176

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        AAI+ IF   +W M  +    +  +P+D   V+R   LS W+    
Sbjct: 177 FKGANP--------AAIWTIFICSIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P ++  + +++   W  +VA+EM+  G       GIG ++       ++  I+
Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 282

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267
            A+  +  V  L +  L +    ++
Sbjct: 283 IAIFVIGIVGLLLEMALVKLATAFT 307


>gi|227112289|ref|ZP_03825945.1| nitrate transporter permease component [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 305

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 14/221 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   +     Y    +   + W    ++ RV +   +A+++ IP G  IG    +
Sbjct: 85  WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 144

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++ + P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 145 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 200

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 201 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTGG---- 256

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR-FLW 574
              G+G +I       +   +++ ++++    L L +  +W
Sbjct: 257 --VGIGFWIWNEWNNLNVENIIIAIVVIGVIGLLLEQGLVW 295



 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 109/277 (39%), Gaps = 24/277 (8%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPITLD 57
           Y +L   + +++FP +  L   V V  I  +               +            +
Sbjct: 46  YRLLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAGPN 105

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +      +  R+     ++ L       L  +   L  +L PI+ +++ +  L +L 
Sbjct: 106 DQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP 165

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS +
Sbjct: 166 IGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEF 217

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I       +
Sbjct: 218 TIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNNLN 271

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           +  I+ A++ +  +  L +Q     ++  +N+F  + 
Sbjct: 272 VENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 304


>gi|163850691|ref|YP_001638734.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|218529414|ref|YP_002420230.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|163662296|gb|ABY29663.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|218521717|gb|ACK82302.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 273

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 18/227 (7%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406
            A+ + W +    +  +  +   +  WL           +++RVVV   + + + +P+G+
Sbjct: 41  AAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAGLALPLGL 100

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           ++G    I   I P  Q+L   P   + PL +          N     L+  G  + +L 
Sbjct: 101 FMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N IAG       +   A S   +    +R +ILP   PY ++GA    G A+   IV+E+
Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         GLG  I E+ E     +++ G+L +    L ++  +
Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAV 257



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 85/240 (35%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+     +         P +  D    +    L    +   A  +  R++    +   
Sbjct: 34  PMVLPSPAAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAG 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +   + P++ +++ IP + ++  ++++F              A+F 
Sbjct: 94  LALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +RS   S    F  + +P + P ++    + + 
Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V +      G+G  I  A +      I+  MLT+  +  + D  + R
Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAVSR 259


>gi|254439504|ref|ZP_05052998.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254950|gb|EDY79264.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 510

 Score =  140 bits (354), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + YQ+V   + LG  ++FRV+V  ++ + I IP+G  +G          P  + +  
Sbjct: 302 IAKYGYQNVYLTVHLGF-SLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 360

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PLV+       +        L+     W +     +G S         A S  
Sbjct: 361 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 416

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+  R++I+P   P   TGA  A G  W   + +E+ +         G+G  I  ++
Sbjct: 417 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEEGIGKMITTAS 470

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +  +   ++LGV+I+      ++  +      +  R L
Sbjct: 471 KFQNTDIILLGVIIIGLVGFGIDMLM-----RWAERSL 503



 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R++   ++              S        PI++ M+ +P L  +   +
Sbjct: 312 LTVHLGFSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVI 371

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F     GK        IF +F + +W M  +    +  +       + S   S WQ  
Sbjct: 372 IWFGIGEVGK--------IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLGASRWQIL 423

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+P +     ++M   W  VVA+E++   +      GIG  I  A K Q+   
Sbjct: 424 RHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE------GIGKMITTASKFQNTDI 477

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           IL  ++ +  V F  D L+    R ++ W  K
Sbjct: 478 ILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 509


>gi|315641134|ref|ZP_07896213.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus italicus DSM 15952]
 gi|315483142|gb|EFU73659.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Enterococcus italicus DSM 15952]
          Length = 579

 Score =  140 bits (354), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +LV+ +I  ++ G +   V   ++ ++ I     +L      T   ++ + V+S++ 
Sbjct: 54  LVLILVVSLIAFIISGKKWGLVLFSLIGLLYIY--NQNLWSDLMSTVTLVIVSSVVSIII 111

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   AKS R   ++ PILD MQ++P   +L   V +F     G V G   + IFA+
Sbjct: 112 GVPLGIWMAKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFAL 168

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  IP++L E S SF  +G Q+ + L +P +   ++  +  +   
Sbjct: 169 PPTVRF-----TNLGIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTML 223

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++   +       L ++ +  + D+ 
Sbjct: 224 ALSMVVIASMI-------GAPGLGRGVLSALQHAQVGNGFVNGLALVILAIVMDRF 272



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  ++ I    ++  +  G  W  + + +    Y     +      T+  V+V  +++ I
Sbjct: 51  IHPLVLILVVSLIAFIISGKKWGLVLFSLIGLLYIYNQNLWSDLMSTVTLVIVSSVVSII 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+         IQP    +   P  V+    V+      +       +     
Sbjct: 111 IGVPLGIWMAKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P +  E + SF  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLGIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +  + +        +  L +    + ++RF
Sbjct: 227 MVVIASMIG-------APGLGRGVLSALQHAQVGNGFVNGLALVILAIVMDRF 272


>gi|325110800|ref|YP_004271868.1| binding-protein-dependent transporters inner membrane component
           [Planctomyces brasiliensis DSM 5305]
 gi|324971068|gb|ADY61846.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces brasiliensis DSM 5305]
          Length = 253

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 10/242 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +   VS +L  +       V   +    +    + F+      +    C+++ RV   
Sbjct: 6   IRAWLPVSLVLIWYAMSASGLVTPLLLPNPVDVATSAFSLSWSGELFRHICVSLLRVFEG 65

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            ++A+++ I +G  IG        +    Q L   P   +FPL V       ++      
Sbjct: 66  FLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGIGEVSK----V 121

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            ++  G  + IL NVI G     + + E+A  + I  W+++R +I+PG  P  +TG    
Sbjct: 122 FIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGAMPSILTGLRVG 181

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G AW   + +E+ +        +G+G  I ++ +      V++G+L +      ++  L
Sbjct: 182 IGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGMLTIGLLGTLMDVAL 235

Query: 574 WH 575
             
Sbjct: 236 RQ 237



 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 102/266 (38%), Gaps = 21/266 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F+ R   P    L+ + +    +   L        P D+            L ++   +
Sbjct: 3   AFLIRAWLPVSLVLIWYAMSASGLVTPLL----LPNPVDVATSAFSLSWSGELFRHICVS 58

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+    +++ +   +  +           +  +L  ++ IP +G+    V++F     
Sbjct: 59  LLRVFEGFLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGIG-- 116

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E++ +F IF    + +  ++   +        E+++ + +  W+ F  + VP +
Sbjct: 117 ------EVSKVFIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGA 170

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP ++  + + +   W  VVA+E+I          G+G  I  A +      ++  MLT+
Sbjct: 171 MPSILTGLRVGIGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGMLTI 224

Query: 249 LGVIFLYDQLLFR---PMIVWSNKFR 271
             +  L D  L +    ++ W   FR
Sbjct: 225 GLLGTLMDVALRQLDARLVKWRQPFR 250


>gi|329901029|ref|ZP_08272674.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327549276|gb|EGF33852.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 273

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     ++     +M+RVVV  ++ + + +P+G+ +G    + + + P  Q+L   P 
Sbjct: 65  LKWAFSGELLIDTFNSMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPP 124

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + +L N IAG     + +   A +   + 
Sbjct: 125 IAYIPLSILWFGLG----NPPAVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQ 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +  ++LP   PY ++G     G A+   IV+E+ +         GLG  I E+ E  
Sbjct: 181 STLFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYF 234

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +++ G++ +    L ++
Sbjct: 235 WSDKIIAGMISIGMLGLVID 254



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R++   ++              S+R+   L P++ +++ IP + ++  
Sbjct: 71  GELLIDTFNSMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPPIAYIPL 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F    P         A+F I     + +  +    + N+       +R+   S   
Sbjct: 131 SILWFGLGNPP--------AVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQST 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + + +   +  V+ +EMI V +      G+G  I  A +    
Sbjct: 183 LFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVNN------GLGFRILEAREYFWS 236

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             I+  M+++  +  + D  + R
Sbjct: 237 DKIIAGMISIGMLGLVIDLAVTR 259


>gi|229197192|ref|ZP_04323926.1| ABC transporter, permease protein [Bacillus cereus m1293]
 gi|228586305|gb|EEK44389.1| ABC transporter, permease protein [Bacillus cereus m1293]
          Length = 272

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++   W  V            I  +           +     ++  RV+   I+ +++ I
Sbjct: 36  LILTIWSVVAKFSDPQFLPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNLVAI 95

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+ IG  P + +   P    +   P   F  L +        +       L+++ T +
Sbjct: 96  PVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFGIGEQSK----IFLIMYATFF 151

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N I G  A   D    A S   + W+   ++I+P   PY  TGA  A G ++ A +
Sbjct: 152 IVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIV 211

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+ +         G+G  I  +        + +G++I+      ++R  
Sbjct: 212 GAEMVA------ANEGIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 256



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N       + +   I   +  + +  ++       Q    P  ++          SL  Y
Sbjct: 17  NFKIGLQKKLLQSGIIAWILILTIWSVVAKFSD-PQFLPSPIAVLYGAIELSQNGSLFIY 75

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + LR+++  ++  L       L  +   L  +  P+++ ++ IP L F+T  +++F 
Sbjct: 76  IGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFG 135

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + IF I  +  + +T +    +  +  D    +RS   S WQ  +++ 
Sbjct: 136 IG--------EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVI 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +     ++M   +  +V +EM+   +      GIG  I  A        I   
Sbjct: 188 IPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE------GIGYMIWNARLYFKTDWIFVG 241

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  + FL D++ 
Sbjct: 242 LVILGLMGFLMDRIF 256


>gi|260575135|ref|ZP_05843136.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259022757|gb|EEW26052.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 655

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 90/542 (16%), Positives = 177/542 (32%), Gaps = 61/542 (11%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L V    + A  T   ++ A+ I ++   V    A  S R   +  P+LD+MQ++P   +
Sbjct: 134 LAVFGQWESAMITLASIVIAVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAY 193

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F            +AA+ A     +  M      +L +IP ++ + +R    +
Sbjct: 194 LVPILFLFG--------FGPVAALLATVIYAMPPMVRITTLALRSIPPEINDFARMVGCT 245

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           GWQ+   + +P ++P L+  +   +      V+ + MI  G       G+G  +  A++ 
Sbjct: 246 GWQRLRKVLLPAALPDLMVGVNQVIMLSLNMVIIASMIGAG-------GLGFDVLNALRR 298

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295
            D+ A + A L +  +    D+L        S    L          SW+    R    L
Sbjct: 299 LDIGAGVEAGLAITALAVALDRL--------SQALALRAGLPDAATGSWIK---RHPKTL 347

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN------------------ 337
             +          L     +     G +      + L    N                  
Sbjct: 348 AVLALVLATGLLGLVWPWLQTYPKAGELSTKAFWSDLVKSININYFDQLEAWRTFVLTYM 407

Query: 338 -QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVV 391
              V   L    +  V  +     WQ     +        L+++  G       T++   
Sbjct: 408 LLPVKRFLLALPWPWVVALVTLAGWQLGRARLAALCLGLSLFLVAAGLWEQAMTTVYLCG 467

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V +++A ++ +P+G+           I      L   P+ V+   VV        +    
Sbjct: 468 VSVVVAVLVGLPLGVLAASNATAGKVIGGVIDTLQTLPSFVYLIPVVMLFRVGDFSAMTA 527

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + L  +     Y       G  A P +  E  +    T W+    I LP   P  + G  
Sbjct: 528 VVLYALAPAVRY----TAHGLRAVPEELVEAGTVCGCTPWQVLTRIRLPMALPDILLGVN 583

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                A +  +++ +            LG  +  +  +      ++  + +    +  +R
Sbjct: 584 QTIMLALSMLVITALVGTRD-------LGQEVYIALTRADTGAGIVAGVCVAALAIIADR 636

Query: 572 FL 573
            +
Sbjct: 637 LI 638



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 76/245 (31%), Gaps = 19/245 (7%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           +  R    + +        V + +    +               ++L     +   ++ +
Sbjct: 88  TEGRGRKAVTLVPPLSWIAVTVAMGTLGVYARNLWLGLGVGALFLYLAVFGQWESAMITL 147

Query: 396 IASIIWIPVGIWIG--------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            + +I +P+G+  G          P       P   L+   P   +   ++    +  + 
Sbjct: 148 ASIVIAVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAYLVPILFLFGFGPVA 207

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L   +         ++        + P +  + A     TGW+  R ++LP   P  +
Sbjct: 208 ALLATVIY----AMPPMVRITTLALRSIPPEINDFARMVGCTGWQRLRKVLLPAALPDLM 263

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       + N  I++ +   G       GLG  +  +  +      V   L +    +
Sbjct: 264 VGVNQVIMLSLNMVIIASMIGAG-------GLGFDVLNALRRLDIGAGVEAGLAITALAV 316

Query: 568 ALNRF 572
           AL+R 
Sbjct: 317 ALDRL 321


>gi|302546698|ref|ZP_07299040.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302464316|gb|EFL27409.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces himastatinicus ATCC 53653]
          Length = 873

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 93/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++    P  +       +D   L   A  T   +L A  I+++F   
Sbjct: 49  LLLAGILAVLAWWLRGLL-PAVLAFAGFALIDSIELWGEAMNTLALVLVAGAITIVFAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A+++R +   + P+LD MQ++P   +L   + +F     G V G     IF++   
Sbjct: 108 LGIWASRNRGVSASIRPVLDFMQTMPAFVYLIPGIFFFGL---GVVPGVVATVIFSMPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F     +    + +P ++P ++  +   +     
Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQLPLALPTIMAGINQVIMLALS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+          G+GS +  AI   D+       + ++ +    D++
Sbjct: 220 MVVIAGMV-------GAEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            ++ G+   +AW   G +     +      D + +      T+  V+V   I  +  +P+
Sbjct: 49  LLLAGILAVLAWWLRGLLPAVLAFAGFALIDSIELWGEAMNTLALVLVAGAITIVFAVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S+ I+P    +   PA V+    +  + ++ L     +   +IF +    
Sbjct: 109 GIWASRNRGVSASIRPVLDFMQTMPAFVYL---IPGIFFFGLGVVPGVVATVIF-SMPPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F     R    + LP   P  + G       A +  +++
Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQLPLALPTIMAGINQVIMLALSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           GLG+ + ++           G + +    + L+R 
Sbjct: 225 GMVG-------AEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265


>gi|312141398|ref|YP_004008734.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311890737|emb|CBH50056.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 271

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 10/253 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
            +    R  +   +  L +      +       +V   ++   +     +       +  
Sbjct: 2   SSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILVSDDSLIREFAPQEVLPALGGLIERG 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     +M+R++V + IA++I IP+G+ IG  P +   ++P  Q L       + P+ 
Sbjct: 62  VLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V+     H      +  L+     W I+ N  AG  A       VA S   T       +
Sbjct: 122 VALFGIGHR----PVFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAV 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP I  +  TG   A G AW   + +E+          +GLG  I  + ++ ++ +V+ 
Sbjct: 178 VLPAIRGHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMA 231

Query: 558 GVLIMCCFVLALN 570
            +L++      L+
Sbjct: 232 VILVIGLLGFLLD 244



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 25/258 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETT-----------VPRDIVDIVPITLDV 58
             SR+   + +      L    + +LL     T             P++++  +   ++ 
Sbjct: 1   MSSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILVSDDSLIREFAPQEVLPALGGLIER 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +  R+L  + I+ +       L   +  +   + P+   ++ I  L +   
Sbjct: 61  GVLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPI 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V  F   +            F I  + VW +  +    +  I      V+RS   +  +
Sbjct: 121 AVALFGIGHRP--------VFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTE 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P     L   + +++   W  +V +EM+ V        G+G  I  A  +   
Sbjct: 173 RLTAVVLPAIRGHLQTGLRVALGIAWVVLVPAEMLGV------QSGLGYQILNARDQLAY 226

Query: 239 LAILYAMLTMLGVIFLYD 256
             ++  +L +  + FL D
Sbjct: 227 DQVMAVILVIGLLGFLLD 244


>gi|209521333|ref|ZP_03270048.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
 gi|209498218|gb|EDZ98358.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
          Length = 148

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 78/141 (55%), Positives = 102/141 (72%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N      +RR+ PN +D +AF L+I +I +   G  +T  P   +    I+LD   LP+Y
Sbjct: 8   NRTANASARRLLPNAWDFIAFPLIICLIAMASIGFHQTLAPMSTLKTQVISLDPAHLPEY 67

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A RTTLRML+AMV SL+FT  Y TLAAKSRR   VLVPILDI+QS+P+LG+++FTV +F+
Sbjct: 68  AMRTTLRMLAAMVASLVFTLTYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFL 127

Query: 125 NLYPGKVIGAELAAIFAIFTS 145
            L+PG+V+GAELAAIFAIFTS
Sbjct: 128 ALFPGRVLGAELAAIFAIFTS 148


>gi|288962927|ref|YP_003453221.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288915193|dbj|BAI76677.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 277

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     +++    +++RVV+   I + + +P+G+ +G  P I +   P  Q+L   P 
Sbjct: 69  ILWALSGEMLFDAWSSLYRVVLGFAIGAGLALPLGLAMGGNPRIHALFDPLMQVLRPIPP 128

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + +L N IAG       +   A +     
Sbjct: 129 IAYIPLAILWFGLG----NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGK 184

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +  +ILP   PY + GA    G A+   IVSE+ +        +GLG  I E+ E  
Sbjct: 185 LTMFLRVILPAATPYILAGARIGIGTAFIVVIVSEMIA------VNSGLGFRILEAREFM 238

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +++ G+  +    LA++
Sbjct: 239 WSDKIIAGMFTIGLLGLAID 258



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 83/240 (34%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVISLL 81
            +V+     ++       +P +  D    +  + +L          +  R++    I   
Sbjct: 38  PVVLPSPVQVVVRWWAYLLPTEPYDPATSSWILWALSGEMLFDAWSSLYRVVLGFAIGAG 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      + R+  +  P++ +++ IP + ++   +++F              A+F 
Sbjct: 98  LALPLGLAMGGNPRIHALFDPLMQVLRPIPPIAYIPLAILWFGLGN--------APAVFL 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +R+        F  + +P + P ++    + + 
Sbjct: 150 IAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGKLTMFLRVILPAATPYILAGARIGIG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ SEMI V        G+G  I  A +      I+  M T+  +    D  + R
Sbjct: 210 TAFIVVIVSEMIAVNS------GLGFRILEAREFMWSDKIIAGMFTIGLLGLAIDIGMNR 263


>gi|104781070|ref|YP_607568.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110057|emb|CAK14762.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 251

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   +W   +++ R++V +++A +I +P+G+ +G   H+ +   P  
Sbjct: 44  TLQSLVELLGQGEVYGHVW---VSLKRILVGLVLALLIGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFMLDAL 240



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P+  +  +   L    +  +   +  R+L  +V++LL       L    R L 
Sbjct: 34  GLSARFSPQATLQSLVELLGQGEVYGHVWVSLKRILVGLVLALLIGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + F+ D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFMLDAL 240


>gi|206974538|ref|ZP_03235454.1| taurine ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217960446|ref|YP_002339008.1| taurine ABC transporter, permease protein [Bacillus cereus AH187]
 gi|222096497|ref|YP_002530554.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter , permease [Bacillus cereus Q1]
 gi|229139641|ref|ZP_04268211.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
 gi|206747181|gb|EDZ58572.1| taurine ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217063782|gb|ACJ78032.1| taurine ABC transporter, permease protein [Bacillus cereus AH187]
 gi|221240555|gb|ACM13265.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus Q1]
 gi|228643772|gb|EEL00034.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
          Length = 274

 Score =  140 bits (352), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++   W  V            I  +           +     ++  RV+   I+ +++ I
Sbjct: 38  LILTIWSVVANFSDPQFLPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNLVAI 97

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+ IG  P + +   P    +   P   F  L +        +       L+++ T +
Sbjct: 98  PVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFGIGEQSK----IFLIMYATFF 153

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N I G  A   D    A S   + W+   ++I+P   PY  TGA  A G ++ A +
Sbjct: 154 IVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIV 213

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+ +         G+G  I  +        + +G++I+      ++R  
Sbjct: 214 GAEMVA------ANEGIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N       + +   I   +  + +  ++       Q    P  ++          SL  Y
Sbjct: 19  NFKIGLQKKLLQSGIIAWILILTIWSVVANFSD-PQFLPSPIAVLYGAIELSQNGSLFIY 77

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + LR+++  ++  L       L  +   L  +  P+++ ++ IP L F+T  +++F 
Sbjct: 78  IGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFG 137

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + IF I  +  + +T +    +  +  D    +RS   S WQ  +++ 
Sbjct: 138 IG--------EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +     ++M   +  +V +EM+   +      GIG  I  A        I   
Sbjct: 190 IPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE------GIGYMIWNARLYFKTDWIFVG 243

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  + FL D++ 
Sbjct: 244 LVILGLMGFLMDRIF 258


>gi|119474985|ref|ZP_01615338.1| Binding-protein-dependent transport systems inner membrane
           component [marine gamma proteobacterium HTCC2143]
 gi|119451188|gb|EAW32421.1| Binding-protein-dependent transport systems inner membrane
           component [marine gamma proteobacterium HTCC2143]
          Length = 316

 Score =  140 bits (352), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+M R++    IA ++ + +G+ +G      + + P+ +++   PA  + PL +     
Sbjct: 122 LISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAILMWPT 181

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  +   G  + I+ N I G    P      A S        + +++LP   
Sbjct: 182 EESS----IVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAAL 237

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G     G +W + +  E+ S  +      G+G +  ++    ++P++V+G+LI+ 
Sbjct: 238 PSIAAGLSIGMGISWFSLLAGEIISGQY------GIGYFTWDAYSMINYPDIVVGMLIIG 291

Query: 564 CFVLALNRFL 573
                    +
Sbjct: 292 GLGTLSTYLI 301



 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 90/227 (39%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +       L      ++   +  R+L A  I+++       L  +SR     ++P
Sbjct: 99  PSPTTVGAAFLSHLGDAEFYKHILISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLP 158

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +++++ IP + ++   ++ +           E + ++  F   ++ +  +    +   P
Sbjct: 159 YIEVIRPIPAVAWIPLAILMW--------PTEESSIVYITFLGALFPIILNTIHGVKETP 210

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   + S      + FW++ +P ++P +   + + M   WF ++A E+I         
Sbjct: 211 EVLVRAAVSLGAKKMEVFWHVVLPAALPSIAAGLSIGMGISWFSLLAGEIISG------Q 264

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
            GIG +   A    +   I+  ML + G+  L      L+ RP + W
Sbjct: 265 YGIGYFTWDAYSMINYPDIVVGMLIIGGLGTLSTYLIGLMMRPALRW 311


>gi|254453930|ref|ZP_05067367.1| taurine ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198268336|gb|EDY92606.1| taurine ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 420

 Score =  140 bits (352), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + YQ+V   + LG  ++FRV+V  ++ + I IP+G  +G          P  + +  
Sbjct: 212 IAKYGYQNVYLTVHLGF-SLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 270

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PLV+       +        L+     W +     +G S         A S  
Sbjct: 271 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 326

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+  R++I+P   P   TGA  A G  W   + +E+ +         G+G  I  ++
Sbjct: 327 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEEGIGKMITTAS 380

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +  +   ++LGV+I+      ++  +      +  R L
Sbjct: 381 KFQNTDIILLGVIIIGLVGFGIDMLM-----RWAERSL 413



 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R++   ++              S        PI++ M+ +P L  +   +
Sbjct: 222 LTVHLGFSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVI 281

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F     GK        IF +F + +W M  +    +  +       + S   S WQ  
Sbjct: 282 IWFGIGEVGK--------IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLGASRWQIL 333

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+P +     ++M   W  VVA+E++   +      GIG  I  A K Q+   
Sbjct: 334 RHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE------GIGKMITTASKFQNTDI 387

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           IL  ++ +  V F  D L+    R ++ W  K
Sbjct: 388 ILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 419


>gi|253997022|ref|YP_003049086.1| nitrate ABC transporter inner membrane subunit [Methylotenera
           mobilis JLW8]
 gi|253983701|gb|ACT48559.1| nitrate ABC transporter, inner membrane subunit [Methylotenera
           mobilis JLW8]
          Length = 280

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V W    ++ RV +   +A++I IP+G  IG    ++    P   LL       + P+ +
Sbjct: 86  VGWNILASLQRVGLGFGLAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLPIGL 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N     ++     W ++ N   G +  P D+  VA   +++ W+    I+
Sbjct: 146 LVFKAA----NPAAIWVIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKIL 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY +TG   + G AW   + +E+ + G       G+G ++ +     +   +++ 
Sbjct: 202 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 255

Query: 559 VLIMCCFVLALNRFL 573
           + I+    L L   L
Sbjct: 256 IFIVGIVGLLLEYAL 270



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 24/267 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINI---LLHGIQETTVPRDIVDIVPI---TLDVHSLPQYAS 66
           R I P IF L   V++  +I      L G  +T      +   P     ++   +     
Sbjct: 32  RWILPPIFGLFFLVVIWAMIAAHTPELPGPIKTWASAVELFSDPFYDRGINDKGVGWNIL 91

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+     ++ L       +  +   +  +  P++ +++ +  L +L   ++ F   
Sbjct: 92  ASLQRVGLGFGLAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLPIGLLVFKAA 151

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        AAI+ IF S VW M  +    +  +P+D   V++   LS W+    +  P
Sbjct: 152 NP--------AAIWVIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKILFP 203

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           F +P ++  + +S+   W  +VA+EM+  G       GIG ++       ++  I+ A+ 
Sbjct: 204 FVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIF 257

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273
            +  V  L +  L +     + +F  E
Sbjct: 258 IVGIVGLLLEYALTQI----AKRFSYE 280


>gi|56751996|ref|YP_172697.1| sulfonate/nitrate transport system permease [Synechococcus
           elongatus PCC 6301]
 gi|81300915|ref|YP_401123.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
 gi|2150109|gb|AAB58737.1| integral membrane protein [Synechococcus elongatus PCC 7942]
 gi|2330515|dbj|BAA21794.1| intrinsic membrane protein [Synechococcus elongatus PCC 7942]
 gi|56686955|dbj|BAD80177.1| sulfonate/nitrate transport system permease protein [Synechococcus
           elongatus PCC 6301]
 gi|81169796|gb|ABB58136.1| nitrate transport permease [Synechococcus elongatus PCC 7942]
          Length = 263

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 20/257 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--------- 373
           +R   P       S   V   L I+      G        S+  + + F +         
Sbjct: 2   VRTPVPLYLRWAVSILSVLAFLAIWQIAAASGFLGKTFPGSLRTLQDLFGWLSDPFFDNG 61

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + L + W   I++ RV +  ++A+++ IP+GI IG     SS   PF QLL       +
Sbjct: 62  PNDLGIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAW 121

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        +  L    +++  + W  L N   G +    DF +V+ S   + WR 
Sbjct: 122 LPIGLFLFR----DSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRT 177

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +ILP   P  + G   + G AW   + +E+          TG+G +I       S P
Sbjct: 178 ILKVILPAALPSIIAGMRISMGIAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLP 230

Query: 554 EVVLGVLIMCCFVLALN 570
            +   ++I+    + L+
Sbjct: 231 NIFSAIIIIGIVGILLD 247



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+    +++ +           S     +  P + +++ +  L +L   
Sbjct: 66  GIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPIG 125

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F +        +EL  +F I  S +W    +    + N+  D  +VS+S   S W+ 
Sbjct: 126 LFLFRD--------SELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRT 177

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  M +SM   W  +VA+EM++         GIG +I        L 
Sbjct: 178 ILKVILPAALPSIIAGMRISMGIAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLP 230

Query: 240 AILYAMLTMLGVIFLYDQ 257
            I  A++ +  V  L DQ
Sbjct: 231 NIFSAIIIIGIVGILLDQ 248


>gi|73661766|ref|YP_300547.1| nitrate/sulfonate/bicarbinate ABC transporter permease
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494281|dbj|BAE17602.1| putative ABC-type nitrate sulfonate taurine bicarbonate transport
           system permease component [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 253

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR +V  ++A +I +P+G  +G    +   I+P  QL+       + P 
Sbjct: 54  GEIFSHLFISLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV          +L    ++     + I+FN I G       + ++AS+ ++TGW+ ++ 
Sbjct: 114 VVLWFGIG----SLPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F + + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 100/251 (39%), Gaps = 14/251 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
               +   P I  ++   +   +I I  +       P  +   +   +    +  +   +
Sbjct: 4   ALTKKFTLPIISFIIFLFIWQCVIWIGNYQPILLPGPLLVAKSIWQFIISGEIFSHLFIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +   V+++L       L  +   L   + P+L +++ I  + +  F V++F     
Sbjct: 64  LFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L A+  IF +  + + F+  + + +I     +++ +  L+GWQ +  +  P +
Sbjct: 122 ------SLPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|240137745|ref|YP_002962217.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
 gi|254560317|ref|YP_003067412.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium
           extorquens DM4]
 gi|240007714|gb|ACS38940.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
 gi|254267595|emb|CAX23437.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens DM4]
          Length = 261

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F +     ++     +++RVVV   + + + +P+G+++G    I   I P  Q+L   P 
Sbjct: 53  FAWLFSGEMLHDAMASLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPP 112

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + +L N IAG       +   A S   + 
Sbjct: 113 IAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASR 168

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R +ILP   PY ++GA    G A+   IV+E+ +         GLG  I E+ E  
Sbjct: 169 MTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYF 222

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
              +++ G+L +    L ++  +
Sbjct: 223 WSDKIIAGMLTIGALGLVIDMAV 245



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 85/240 (35%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+     +         P +  D    +    L    +   A  +  R++    +   
Sbjct: 22  PMVLPSPAAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAG 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +   + P++ +++ IP + ++  ++++F              A+F 
Sbjct: 82  LALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +RS   S    F  + +P + P ++    + + 
Sbjct: 134 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V +      G+G  I  A +      I+  MLT+  +  + D  + R
Sbjct: 194 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAVSR 247


>gi|325673186|ref|ZP_08152879.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325556021|gb|EGD25690.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 271

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 10/253 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
            +    R  +   +  L +      +       +    ++   +     +       +  
Sbjct: 2   SSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILASDDSLIREFAPQEVLPALGGLIERG 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     +M+R++V + IA++I IP+G+ IG  P +   ++P  Q L       + P+ 
Sbjct: 62  VLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V+     H      +  L+     W I+ N  AG  A       VA S   T       +
Sbjct: 122 VALFGIGHR----PVFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAV 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP I  +  TG   A G AW   + +E+          +GLG  I  + ++ ++ +V+ 
Sbjct: 178 VLPAIRGHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMA 231

Query: 558 GVLIMCCFVLALN 570
            +L++      L+
Sbjct: 232 VILVIGLLGFLLD 244



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 25/258 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETT-----------VPRDIVDIVPITLDV 58
             SR+   + +      L    + +LL     T             P++++  +   ++ 
Sbjct: 1   MSSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILASDDSLIREFAPQEVLPALGGLIER 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +  R+L  + I+ +       L   +  +   + P+   ++ I  L +   
Sbjct: 61  GVLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPI 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V  F   +            F I  + VW +  +    +  I      V+RS   +  +
Sbjct: 121 AVALFGIGHRP--------VFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTE 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P     L   + +++   W  +V +EM+ V        G+G  I  A  +   
Sbjct: 173 RLTAVVLPAIRGHLQTGLRVALGIAWVVLVPAEMLGV------QSGLGYQILNARDQLAY 226

Query: 239 LAILYAMLTMLGVIFLYD 256
             ++  +L +  + FL D
Sbjct: 227 DQVMAVILVIGLLGFLLD 244


>gi|170738807|ref|YP_001767462.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168193081|gb|ACA15028.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 288

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 10/255 (3%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L R L           + +   +  +    +    +    A+  A       ++  T   
Sbjct: 22  LRRRLAGWAERAALPLVLVAGWEAFARSGALPPALLPAPSAVLHALADWMLGLDESTQSS 81

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             +       ++ RV+    IA++  + +G+ IG+   +   ++P  Q+L   P   + P
Sbjct: 82  SGHWPSDALASLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWIP 141

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +                L+  G  + IL N I G  +   +     +    +  +   
Sbjct: 142 LAIIWFGIADR----PAIFLVFLGAFFPILMNTIHGVRSVDRNLIRAGAMMGASERQLLA 197

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I+LP   P  V+G   A G AW  ++ +E+ +        +GLG  + +S     +  V
Sbjct: 198 RIVLPAALPAIVSGLRIAIGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDIV 251

Query: 556 VLGVLIMCCFVLALN 570
           +  ++ +       +
Sbjct: 252 LAAMISIGLLGYLSD 266



 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
                P  A  +  R+L+   I+ L            R +   + P L +++ IP + ++
Sbjct: 81  SSGHWPSDALASLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWI 140

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F          A+  AIF +F    + +  +    + ++ R+L         S 
Sbjct: 141 PLAIIWFGI--------ADRPAIFLVFLGAFFPILMNTIHGVRSVDRNLIRAGAMMGASE 192

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P ++P +V  + +++   W   V +EM+ V        G+G  +  +    
Sbjct: 193 RQLLARIVLPAALPAIVSGLRIAIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFL 246

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               +L AM+++  + +L D  L
Sbjct: 247 RYDIVLAAMISIGLLGYLSDLCL 269


>gi|319949524|ref|ZP_08023574.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4]
 gi|319436814|gb|EFV91884.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4]
          Length = 231

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 89/198 (44%), Gaps = 10/198 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +I    ++++R+V  + +A+++ +P+G+W+G R    +   P  Q L       + 
Sbjct: 33  DRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSWA 92

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ ++         N  +  L+     W I+ +  +G  A    + +VA +   +GW   
Sbjct: 93  PVAIAVFGIG----NEPVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGASGWERL 148

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +++P + P  + G   A G AW   + +E+          +GLG  I  + ++ ++ +
Sbjct: 149 TRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLG------VRSGLGYQILNARDQLAYDQ 202

Query: 555 VVLGVLIMCCFVLALNRF 572
           V+  +L++     AL+  
Sbjct: 203 VMAVILVIGVLGFALDSL 220



 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           LD   L   A+ +  R+++ + ++ L            RR   V  P++  ++ I  L +
Sbjct: 32  LDRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSW 91

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +  F               IF +  + +W +  S    +  +     +V+R+   S
Sbjct: 92  APVAIAVFGIGN--------EPVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGAS 143

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           GW++   + +P   P ++  + +++   W  +V +EM+ V        G+G  I  A  +
Sbjct: 144 GWERLTRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLGV------RSGLGYQILNARDQ 197

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
                ++  +L +  + F  D L
Sbjct: 198 LAYDQVMAVILVIGVLGFALDSL 220


>gi|256783156|ref|ZP_05521587.1| ABC-transport protein, membrane component [Streptomyces lividans
           TK24]
          Length = 303

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 21/267 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380
           E+  +   + R    L +    V  G+A+  A  S G+ +           T      + 
Sbjct: 47  ESAPERSRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLA 106

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV++   + + + +PVG  +G+   +   I+P+ Q     P     PL V  
Sbjct: 107 DDALASLTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVA 166

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +             ++        + +   G           A          +  +++P
Sbjct: 167 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVP 222

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+ + G     G AW   + +E+ +         GLG  +  +      P + +G++
Sbjct: 223 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 276

Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584
            +    L ++R L      L  +  R 
Sbjct: 277 SIGILGLLMDRVLLLAERRLTRWQERR 303



 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
               RR  P + + ++  L I +   L     +   P ++VD     +   +L   A  +
Sbjct: 53  SRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLADDALAS 112

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L    +          L      L  ++ P +   ++IP L  +   VV       
Sbjct: 113 LTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVAMGIDET 172

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +       S +Q + N+ R L   +R         F  + VP S
Sbjct: 173 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPAS 224

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  M + +   W  +VA+E+I          G+G  +  A    DL  I   ++++
Sbjct: 225 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 278

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             +  L D++L    R +  W  +
Sbjct: 279 GILGLLMDRVLLLAERRLTRWQER 302


>gi|219851713|ref|YP_002466145.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
 gi|219545972|gb|ACL16422.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
          Length = 269

 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 9/197 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++ RV+V   + S+I IP+GI +G    +        Q+    P   + PL
Sbjct: 67  GSLVDNAIISLERVIVGFAVGSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPL 126

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++       +    +  ++  GT + +L N + G  +    + E+A+       +  R 
Sbjct: 127 ALAWFKIGLTS----MVFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRT 182

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P   TG     G AW   + +E+         ++GLG  I  S   G  P ++
Sbjct: 183 VVLPAALPTIWTGLRVGFGIAWMCVVAAEMMPG-----TSSGLGYLILYSYNFGQVPVII 237

Query: 557 LGVLIMCCFVLALNRFL 573
            G++ +    L ++  L
Sbjct: 238 AGMIGIGVIGLGVDLLL 254



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 86/248 (34%), Gaps = 17/248 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----HSLPQYASRTTLRMLSAMVI 78
           +  + +  ++ I+++          ++ ++           SL   A  +  R++    +
Sbjct: 27  ILLIFLWELVAIVINNQFILPRLESVLMVIASPFTPILGTGSLVDNAIISLERVIVGFAV 86

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +          +   +  +   ++ I + +P L ++   + +F               
Sbjct: 87  GSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPLALAWFKIGLTSM-------- 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I     + +  +    + ++ +   E++     +  Q    + +P ++P +   + +
Sbjct: 139 VFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRTVVLPAALPTIWTGLRV 198

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                W  VVA+EM+    +     G+G  I  +     +  I+  M+ +  +    D L
Sbjct: 199 GFGIAWMCVVAAEMMPGTSS-----GLGYLILYSYNFGQVPVIIAGMIGIGVIGLGVDLL 253

Query: 259 LFRPMIVW 266
           L      W
Sbjct: 254 LGTVEKRW 261


>gi|332286228|ref|YP_004418139.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330430181|gb|AEC21515.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 257

 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 10/191 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            + + + W    ++ RV +  ++A+ + IP+G  IG  P +++   P   LL        
Sbjct: 56  PNDVGIGWNILASLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLRPISPLA- 114

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
               +          +      +   + W ++ N   G    P D+  VA   +++  + 
Sbjct: 115 ---WLPLGLLLFKASDPAAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKI 171

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I+LP + PY +TG   + G AW   + +E+ + G      TGLG ++ +     +  
Sbjct: 172 FTRILLPSVLPYMMTGVRLSIGTAWLVIVAAEMLTGG------TGLGFWLWDEWNNLNVQ 225

Query: 554 EVVLGVLIMCC 564
            +++ VL++  
Sbjct: 226 NILIAVLVIGV 236



 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 82/191 (42%), Gaps = 14/191 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +      +  R+    +++         L  +   +  +  P++++++ I  L +L   
Sbjct: 60  GIGWNILASLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLRPISPLAWLPLG 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F    P        AAI+AIF   +W M  +    +  +P+D   V+R   LS  + 
Sbjct: 120 LLLFKASDP--------AAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKI 171

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P  +P ++  + +S+   W  +VA+EM+  G       G+G ++       ++ 
Sbjct: 172 FTRILLPSVLPYMMTGVRLSIGTAWLVIVAAEMLTGGT------GLGFWLWDEWNNLNVQ 225

Query: 240 AILYAMLTMLG 250
            IL A+L +  
Sbjct: 226 NILIAVLVIGV 236


>gi|295111611|emb|CBL28361.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synergistetes bacterium SGP1]
          Length = 256

 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 88/227 (38%), Gaps = 11/227 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPV 404
           + W+ +   +   +        +  F        V+    IT+ RV +  + A  I +P+
Sbjct: 19  LLWYFLARAIDRSLILPDFLVTMKTFFLGWFDKKVMSNLGITLMRVFMGCVYAVAIGLPL 78

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ +G        + P+   +   P   + PL +                ++     + I
Sbjct: 79  GLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGDG----PTIFMIAMSAVFPI 134

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L N I+G      ++K  A       W+  R +++PG  P ++TG   A GGAW + I +
Sbjct: 135 LINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPGALPSFLTGCRLALGGAWMSVICA 194

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           E  +       + G G  + E+  + + P +   +++      A+++
Sbjct: 195 EFIA------TSKGFGYIMVEAQVRMNTPLLYALMIMSALVGFAMDK 235



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 17/205 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R+    V ++        L   SR   + L P ++ ++ +PI+ ++  ++++F    
Sbjct: 60  TLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGD 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      IF I  S V+ +  +    + NI  + +  +R      WQ    + VP 
Sbjct: 120 GP--------TIFMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPG 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +    +++ G W  V+ +E I          G G  +  A    +   +   M+ 
Sbjct: 172 ALPSFLTGCRLALGGAWMSVICAEFIATSK------GFGYIMVEAQVRMNTPLLYALMIM 225

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269
              V F  D+   LL   +  W  K
Sbjct: 226 SALVGFAMDKSIVLLEHSLTGWRYK 250


>gi|50121917|ref|YP_051084.1| nitrate transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612443|emb|CAG75893.1| nitrate transporter permease component [Pectobacterium atrosepticum
           SCRI1043]
          Length = 280

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              W +   +     Y    +   + W    ++ RV +   +A+++ IP G  IG    +
Sbjct: 60  WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 119

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++ + P   LL       + P+ +          +      +   + W ++ N   G   
Sbjct: 120 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 175

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P D+  VA    ++ +   R I+LP + P  +TG   + G AW   + +E+ + G    
Sbjct: 176 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTGG---- 231

Query: 535 RTTGLGAYIAESTEKGSF 552
              G+G +I       + 
Sbjct: 232 --VGIGFWIWNEWNNLNV 247



 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 109/279 (39%), Gaps = 24/279 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55
           F Y  L   + +++FP +  L   + V  I  +               +           
Sbjct: 19  FAYRPLLRKLFQQLFPAVLGLGLLIAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAG 78

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +      +  R+     ++ L       L  +   L  +L PI+ +++ +  L +
Sbjct: 79  PNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAW 138

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F    P        A+ + IF   +W M  +  + +  IP+D   V+R  +LS
Sbjct: 139 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 190

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P  +P ++  + +S+   W  +VA+EM+  G       GIG +I      
Sbjct: 191 EFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 244

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
            ++  I+ A++ +  +  L +Q     ++  +N+F  + 
Sbjct: 245 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 279


>gi|195977325|ref|YP_002122569.1| glycine betaine transport system permease protein OpuAB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974030|gb|ACG61556.1| glycine betaine transport system permease protein OpuAB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 576

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +++    +     ++  +P   +  +    +   L      T   +L A +IS+L  
Sbjct: 54  LLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS+ +  V+ P+LD+MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +  QK   + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L +              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  INPLLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GIW+     +   I P   L+   PA V+    V+      +       +     
Sbjct: 111 LGIPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272


>gi|148257774|ref|YP_001242359.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409947|gb|ABQ38453.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 269

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 10/237 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L   +  S    +    +     +  AW       +  T     + +     ++ RV   
Sbjct: 20  LVGWEAFSRSGALPAALLPAPSTVVWAWTDWLVGTDGNTQTYSGHWVADMLASLSRVAAG 79

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             IA+++ + +G+ IG+   I   I+P  Q+L   P   + PL +          N    
Sbjct: 80  FAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGIA----NKPAI 135

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+  G  + IL N I G  +   +     +    +  +  RYI++P   P    G    
Sbjct: 136 FLVFLGAFFPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIG 195

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            G AW  ++ +E+ +        +GLG  + +S     +  V+  +  +       +
Sbjct: 196 IGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDLVLAAMASIGLLGFCSD 246



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+ +   I+ +           SRR+ +V+ P L +++ IP + ++   +++F 
Sbjct: 69  MLASLSRVAAGFAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFG 128

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    A   AIF +F    + +  +    + +  R+L         S  +   Y+ 
Sbjct: 129 I--------ANKPAIFLVFLGAFFPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIV 180

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP +MP +   + + +   W   V +EM+ V        G+G  +  +        +L A
Sbjct: 181 VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRYDLVLAA 234

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWS 267
           M ++  + F  D   +L+   ++ W 
Sbjct: 235 MASIGLLGFCSDLSIRLVMARVLHWQ 260


>gi|312879364|ref|ZP_07739164.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
 gi|310782655|gb|EFQ23053.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
          Length = 274

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 11/259 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDV 376
           R    +          L        +  ++W     G+       S   + +        
Sbjct: 7   RAGTRLPSERVPGPGGLSGLLLPGVIGLLWWGASRLGLWNPYLLPSPEQVFSSLGSLAAS 66

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +  R+     ++S++ +P+G+ +G RP +     P  + L   P     PL
Sbjct: 67  GELARHVGASAGRIAAGFGLSSLVALPLGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPL 126

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +       +++  T + +  N + G         EV  +  ++     R 
Sbjct: 127 LILWFGIGEGSKMA----VILLATFFPVFLNTLEGVRRCDPGLLEVGRTLGLSEGEGVRR 182

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P  +TG     G +W + I +E+ +        +GLG  I ++        +V
Sbjct: 183 IVLPAALPSILTGLRLGLGYSWRSLIGAELIA------AASGLGYLIHDAEALSRPDVIV 236

Query: 557 LGVLIMCCFVLALNRFLWH 575
            GVL++     A +   + 
Sbjct: 237 AGVLVLGVIGAATDHLFFR 255



 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L  G   + L        P  +   +        L ++   +  R+ +   +S L    
Sbjct: 34  LLWWGASRLGLWNPYLLPSPEQVFSSLGSLAASGELARHVGASAGRIAAGFGLSSLVALP 93

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L     RLG +  P L+ ++ +P L  L   +++F      K+    LA  F +F  
Sbjct: 94  LGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPLLILWFGIGEGSKMAVILLATFFPVF-- 151

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                  +  + +      L EV R+  LS  +    + +P ++P ++  + + +   W 
Sbjct: 152 ------LNTLEGVRRCDPGLLEVGRTLGLSEGEGVRRIVLPAALPSILTGLRLGLGYSWR 205

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---P 262
            ++ +E+I          G+G  I  A        I+  +L +  +    D L FR    
Sbjct: 206 SLIGAELIAAAS------GLGYLIHDAEALSRPDVIVAGVLVLGVIGAATDHLFFRLAAR 259

Query: 263 MIVWSNK 269
           +  W  +
Sbjct: 260 VTPWRPR 266


>gi|166368071|ref|YP_001660344.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
 gi|166090444|dbj|BAG05152.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
          Length = 256

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +  RV+V +++AS I +P+G+ IG    + S +    Q L       + PL
Sbjct: 59  GEIMPHILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +    L     +  L+     W IL N  AG +A    +  +A S   T       
Sbjct: 119 AVMVLGIGDL----PVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQ 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILP I  + +TG   A G  W   + +E+         + GLG YI ++ ++ ++ E++
Sbjct: 175 IILPAILSHLLTGFRLAIGIIWIVLVPAEMLG------VSAGLGYYILDTRDRLAYSELM 228

Query: 557 LGVLIMCCFVLALN 570
             +L++      L+
Sbjct: 229 AVILVIGAIGYLLD 242



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R++  +V++         L    R L   L  +   ++ I  L ++   V+  
Sbjct: 64  HILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPLAVMVL 123

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      +L   F +  + +W +  +    +  + R    ++ S   +  +  + +
Sbjct: 124 GIG--------DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQI 175

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P  +  L+    +++   W  +V +EM+ V        G+G YI           ++ 
Sbjct: 176 ILPAILSHLLTGFRLAIGIIWIVLVPAEMLGVSA------GLGYYILDTRDRLAYSELMA 229

Query: 244 AMLTMLGVIFLYDQLL 259
            +L +  + +L D  L
Sbjct: 230 VILVIGAIGYLLDWGL 245


>gi|303244148|ref|ZP_07330486.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermococcus okinawensis IH1]
 gi|302485533|gb|EFL48459.1| binding-protein-dependent transport systems inner membrane
           component [Methanothermococcus okinawensis IH1]
          Length = 257

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++ RV+   +IA I+ +P+GI +G+   I      F +LL   P   + PL +
Sbjct: 57  LVSNTIISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRPIPPLAWVPLAL 116

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +    +  ++  G  + IL N IAG  + P    E   +           +I
Sbjct: 117 AWFGIGETS----MLFIIFIGAFFPILINTIAGVKSVPKILIESVQTLGAKEKDILLKVI 172

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  +TG     G AW   + +E+           GLG  I  +        VV  
Sbjct: 173 IPASSPGILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSRMDIVVAS 227

Query: 559 VLIMCCFVLALNRFL 573
           ++I+    L+L+R L
Sbjct: 228 MVIIGIIGLSLDRGL 242



 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 82/210 (39%), Gaps = 13/210 (6%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
              PI     +L      +  R+LS  +I+ +       L      +  +    +++++ 
Sbjct: 46  PQNPILGTGVNLVSNTIISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRP 105

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L ++   + +F           E + +F IF    + +  +    + ++P+ L E  
Sbjct: 106 IPPLAWVPLALAWFGIG--------ETSMLFIIFIGAFFPILINTIAGVKSVPKILIESV 157

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           ++           + +P S PG++  + +     W  VVA+EM+   D      G+G  I
Sbjct: 158 QTLGAKEKDILLKVIIPASSPGILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLI 212

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             A     +  ++ +M+ +  +    D+ L
Sbjct: 213 MYAYSLSRMDIVVASMVIIGIIGLSLDRGL 242


>gi|125539527|gb|EAY85922.1| hypothetical protein OsI_07285 [Oryza sativa Indica Group]
          Length = 541

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q   +      ++  + +        A  T   +L+A+   +
Sbjct: 286 LLGMPAPIAILVFSLVAWQIAGLGMGAATLLSLVAIGAIGAWSQAMVTLALVLTALFFCI 345

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 346 LIGLPLGIWLARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 402

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 403 A-----LPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 457

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 458 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAIGGVGIVILAIILDRL 508



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 97/301 (32%), Gaps = 21/301 (6%)

Query: 274 RTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
            +    P    +L  F K    F  ++               + +   + VI   F +  
Sbjct: 227 SSAPAQPEHFSLLDPFHKAWVPFDSWVTQGIDWLVLHFRPLFQGIRVPVDVILSGFQQLL 286

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L + +   +     + W     G+        +            +       +T+  V+
Sbjct: 287 LGMPAPIAILVFSLVAWQIAGLGMGAATLLSLVAI--------GAIGAWSQAMVTLALVL 338

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             +    +I +P+GIW+    H +  I+P    +   PA V+   +V          N+ 
Sbjct: 339 TALFFCILIGLPLGIWLARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVP 394

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             ++ I      I+   I G    P D  E A SF  +  +    + LP   P  + G  
Sbjct: 395 GVVVTIIFALPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVN 454

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                A +  +++ + + G       GLG  +     +       +G + +    + L+R
Sbjct: 455 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAIGGVGIVILAIILDR 507

Query: 572 F 572
            
Sbjct: 508 L 508


>gi|296109397|ref|YP_003616346.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus infernus ME]
 gi|295434211|gb|ADG13382.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus infernus ME]
          Length = 260

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 9/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +           ++    I++ RV+   IIAS++ +P+GI +G+   I++      +L 
Sbjct: 47  LLHPTVDLLGTGSLVSNALISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELF 106

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++      ++    +  ++  G  + IL N I+G    P    E A +
Sbjct: 107 RPIPPLAWVPLSLAWFGIGEVS----MVFIIFIGAFFPILINTISGVKGVPKPLIEAALT 162

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                      +++P   P  +TG     G AW   + +E+          +GLG  I  
Sbjct: 163 LGAKKRDILIKVVIPASSPSILTGLRVGIGIAWMCVVAAEMLPG-----SNSGLGYLITY 217

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        V+  ++++    L L+R L
Sbjct: 218 AYSLSRMDIVIAAMIVIGLIGLILDRGL 245



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 85/204 (41%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL   A  +  R+LS  +I+ L       L      +  +   ++++ + IP L +
Sbjct: 55  LGTGSLVSNALISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELFRPIPPLAW 114

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  ++ +F           E++ +F IF    + +  +    +  +P+ L E + +    
Sbjct: 115 VPLSLAWFGIG--------EVSMVFIIFIGAFFPILINTISGVKGVPKPLIEAALTLGAK 166

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P S P ++  + + +   W  VVA+EM+   ++     G+G  I  A   
Sbjct: 167 KRDILIKVVIPASSPSILTGLRVGIGIAWMCVVAAEMLPGSNS-----GLGYLITYAYSL 221

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ AM+ +  +  + D+ L
Sbjct: 222 SRMDIVIAAMIVIGLIGLILDRGL 245


>gi|269125702|ref|YP_003299072.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268310660|gb|ACY97034.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 269

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 97/272 (35%), Gaps = 10/272 (3%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
             P++    +     G     +   +  L        +  +    +     +  ++    
Sbjct: 5   LRPIAPARSRPPAGSGGASRRWRAPWPPLACLALAVALWWLLTSVIGADDRLLSSFAPQR 64

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +       +   ++     +++R+V+ ++IA+++ +P+G+ IG         +P  Q L
Sbjct: 65  AVPAIGDLAERGVLVEDTLTSLWRLVMGLLIAAVVGVPLGLGIGLSQTAERATRPVLQFL 124

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  + P+ V          +  +  L+     W I+ N  AG  A       VA S
Sbjct: 125 RMISPLSWAPVAVGLFGIG----SEPVFFLVAAAAVWPIVLNTAAGVRAVDPGHILVARS 180

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                      ++LP    + +TG   A G AW   + +E+          +GLG  I  
Sbjct: 181 LGARRGEILGSVVLPSARAHVLTGLRLALGIAWVVLVPAEMLG------VDSGLGYQILN 234

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           + ++ ++ +++  +L++      L+      L
Sbjct: 235 ARDQLAYDQLMAVILVIGALGYVLDALARRAL 266



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 88/255 (34%), Gaps = 17/255 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS---LPQYASRTT 69
           R  +P +  L   V +  ++  ++               VP   D+     L +    + 
Sbjct: 27  RAPWPPLACLALAVALWWLLTSVIGADDRLLSSFAPQRAVPAIGDLAERGVLVEDTLTSL 86

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R++  ++I+ +           S+       P+L  ++ I  L +    V  F      
Sbjct: 87  WRLVMGLLIAAVVGVPLGLGIGLSQTAERATRPVLQFLRMISPLSWAPVAVGLFGIG--- 143

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                     F +  + VW +  +    +  +      V+RS      +    + +P + 
Sbjct: 144 -----SEPVFFLVAAAAVWPIVLNTAAGVRAVDPGHILVARSLGARRGEILGSVVLPSAR 198

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  + +++   W  +V +EM+ V        G+G  I  A  +     ++  +L + 
Sbjct: 199 AHVLTGLRLALGIAWVVLVPAEMLGVDS------GLGYQILNARDQLAYDQLMAVILVIG 252

Query: 250 GVIFLYDQLLFRPMI 264
            + ++ D L  R + 
Sbjct: 253 ALGYVLDALARRALA 267


>gi|125975285|ref|YP_001039195.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256003055|ref|ZP_05428047.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281419275|ref|ZP_06250291.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125715510|gb|ABN54002.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255992746|gb|EEU02836.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281407141|gb|EFB37403.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316939448|gb|ADU73482.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 259

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R  +  + A +  I +G+ +G+   + S I+P  Q+L       +FP +V      
Sbjct: 62  VSLARFFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVLWFGIG 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +++     + IL + ++G       + +VA SF I   +    IILP  FP
Sbjct: 122 DT----PAIVIIFIAGFFPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A G AW   +  E+          +GLG  I ++        V+ G++ +  
Sbjct: 178 LIANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGA 231

Query: 565 FVLALNRFL 573
             L L+R +
Sbjct: 232 LGLLLDRLI 240



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 98/248 (39%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++   +  +   + +  +  +   +       P  +++ +   +   +L  +   +  R
Sbjct: 7   KKVLKVVVSISVLIGIWQLAVLSGKYEPSLLPSPAKVLEGMAELIKDGTLLTHFRVSLAR 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                + +++       L   ++ +   + P++ +++ +  + +  F V++F        
Sbjct: 67  FFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVLWFGIG----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +  AI  IF +  + +  S    + N+     +V+ SF +   Q  + + +P + P 
Sbjct: 122 ---DTPAIVIIFIAGFFPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFPL 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +++   W F+VA EM+          G+G  I  A        +L  ++ +  +
Sbjct: 179 IANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGAL 232

Query: 252 IFLYDQLL 259
             L D+L+
Sbjct: 233 GLLLDRLI 240


>gi|282921823|ref|ZP_06329522.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9765]
 gi|282593877|gb|EFB98867.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9765]
          Length = 253

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L+    + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLSAIAIIFIAAFF----PIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRT 68
             + +    I   + F+ +  ++ I+ H          +V     +  V   + Q+ + +
Sbjct: 4   PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHLAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R ++  V++LL       L  ++R L   + P+  +++ I  + +  F V++F     
Sbjct: 64  LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L+AI  IF +  + + F+  + + +I     +++ +  L+GW  +  +  P +
Sbjct: 122 ------SLSAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|300918768|ref|ZP_07135339.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300414090|gb|EFJ97400.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 298

 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 19/264 (7%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382
            P   +       + +   + +F +   V                  Q+   +       
Sbjct: 43  VPLRPVASRHRWFLGFCFFVLFFALWALVTFTGLVSPTFLASPASMLQEGGLLFTDFDFT 102

Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+ RV+   I+A II +P+GI +G    I +  +PF       PA+ F PL++  
Sbjct: 103 TDIGMTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILW 162

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                +       L++  G+ + I   V     A   D  E A +   T     R +I+P
Sbjct: 163 AGIGEMQK----ILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVIIP 218

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P          G AW   IV+E+         ++G+G  I  S    +  +++ G++
Sbjct: 219 GAAPEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGII 272

Query: 561 IMCCFVLALNRFLW---HPLYLYG 581
           ++ C  L  +         L+++ 
Sbjct: 273 VIGCIGLLSDLLFKAVNRRLFVWS 296



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 18/266 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           + P     R F      + F  +  ++    L        P  ++    +          
Sbjct: 45  LRPVASRHRWFLGFCFFVLFFALWALVTFTGLVSPTFLASPASMLQEGGLLFTDFDFTTD 104

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T +R+L   +++ +       L    + +     P +   + +P   F+   +++  
Sbjct: 105 IGMTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAG 164

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E+  I  IF    + +T  +  ++    RDL E + +   +       + 
Sbjct: 165 IG--------EMQKILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVI 216

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   +++ 
Sbjct: 217 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVNSQALLNTGQMIFG 270

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWS 267
           ++ +  +  L D L   + R + VWS
Sbjct: 271 IIVIGCIGLLSDLLFKAVNRRLFVWS 296


>gi|297191059|ref|ZP_06908457.1| ABC-transporter [Streptomyces pristinaespiralis ATCC 25486]
 gi|197723252|gb|EDY67160.1| ABC-transporter [Streptomyces pristinaespiralis ATCC 25486]
          Length = 304

 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 21/267 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--------IVNHFTYQDVLYVI 380
           +   +     R    L +    VV G+ +  A  + G+        +    T      + 
Sbjct: 48  KAAPEQPRPGRRGLPLALNAVSVVLGIGVWWALSAAGFKLPAPPEVVSQAGTLIGNGMLA 107

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV+    + +   +P+G  +G+ P +   I+P+ Q     P     PL +  
Sbjct: 108 DDILASLTRVLAGFALGTAAAVPIGFLMGWYPVLRGLIEPWIQFFRTIPPLAIIPLAIVV 167

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +             ++        + +   G           A          +  +++P
Sbjct: 168 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDVTIFARVVVP 223

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+ + G     G AW   + +E+ +         GLG  +  +      P + +G++
Sbjct: 224 ASTPFILVGMRVGLGSAWATLVAAELVA------AQQGLGYRMQNAQLYYDLPTIFVGLI 277

Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584
            +    L ++R L      L  +  R 
Sbjct: 278 SIGILGLLMDRILLLAERKLTGWQERR 304



 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P   RR  P   + ++ VL IG+   L     +   P ++V      +    L      +
Sbjct: 54  PRPGRRGLPLALNAVSVVLGIGVWWALSAAGFKLPAPPEVVSQAGTLIGNGMLADDILAS 113

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L+   +          L      L  ++ P +   ++IP L  +   +V       
Sbjct: 114 LTRVLAGFALGTAAAVPIGFLMGWYPVLRGLIEPWIQFFRTIPPLAIIPLAIVVMGIDET 173

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +       S +Q + N+ R L   +R         F  + VP S
Sbjct: 174 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDVTIFARVVVPAS 225

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  M + +   W  +VA+E++          G+G  +  A    DL  I   ++++
Sbjct: 226 TPFILVGMRVGLGSAWATLVAAELVA------AQQGLGYRMQNAQLYYDLPTIFVGLISI 279

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             +  L D++L    R +  W  +
Sbjct: 280 GILGLLMDRILLLAERKLTGWQER 303


>gi|221065520|ref|ZP_03541625.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220710543|gb|EED65911.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 268

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M RV     +A+++ IP+G+ IG    +   + P  Q+L   P   + PL +     
Sbjct: 73  LKSMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVTAWLPLSMIFFGV 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + I+ N   G  +      E A+     G   +R ++LP   
Sbjct: 133 GPN----AAIFLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGASMFRQVVLPAAM 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G     G AW   +V E+           GLGA I +         V+ G++++ 
Sbjct: 189 PSIFNGLRLGHGIAWFLIVVGEM------TGVPEGLGAAIMDGRMLSRTDVVIAGMVVIG 242

Query: 564 CFVLALNRFL 573
                 +R L
Sbjct: 243 FTGFVTDRLL 252



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L  +  ++  R+  A  ++ L       +  K+  +   + P L +++ +P+  +L  +
Sbjct: 67  TLGIHWLKSMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVTAWLPLS 126

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F             AAIF +F    + +  +    + ++   L E +      G   
Sbjct: 127 MIFFGVG--------PNAAIFLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGASM 178

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P +MP +   + +     WF +V  EM  V +      G+G+ I          
Sbjct: 179 FRQVVLPAAMPSIFNGLRLGHGIAWFLIVVGEMTGVPE------GLGAAIMDGRMLSRTD 232

Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
            ++  M+ +    F+ D+LL      ++ WS 
Sbjct: 233 VVIAGMVVIGFTGFVTDRLLVALNNRLLKWSP 264


>gi|227113615|ref|ZP_03827271.1| glycine betaine transporter membrane protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 417

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q ++    +  ++  I +        A  T   +L+A+   +
Sbjct: 163 LLGMPAPIAILVFSLLAWQMSSFGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 222

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 223 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 279

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 280 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 334

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 335 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 385



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 97/297 (32%), Gaps = 40/297 (13%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF----LQLC 335
           P DSWV      T+ + ++       F  +   V  +      +    P         L 
Sbjct: 125 PLDSWV------THGIDWVVLHFRPVFQGVRVPVDFILSGFQQLLLGMPAPIAILVFSLL 178

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           + Q  S+ + +     +  +    AW                       IT+  V+  + 
Sbjct: 179 AWQMSSFGMGVATLLSLIAIGAIGAWS-------------------QAMITLALVLTALF 219

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              +I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++
Sbjct: 220 FCVLIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVV 275

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I      I+   I G    P D  E A SF  +  +    + LP   P  + G      
Sbjct: 276 TIIFALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLM 335

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 336 LALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 385


>gi|146338568|ref|YP_001203616.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191374|emb|CAL75379.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 269

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 83/237 (35%), Gaps = 10/237 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L   +  S    +    +     +  AW       +  T     + +     ++ RV   
Sbjct: 20  LAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQTYSGHWLADMLASLSRVAAG 79

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             IA+++ + +G+ IG+       I+P  Q+L   P   + PL +          N    
Sbjct: 80  FAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIA----NKPAI 135

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+  G  + IL N I G      +     +    +  +  RYI++P   P    G    
Sbjct: 136 FLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIG 195

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            G AW  ++ +E+ +        +GLG  + +S     +  V+  +  +       +
Sbjct: 196 IGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDLVLAAMASIGLLGFCSD 246



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+ +   I+ +           SR+  +V+ P L +++ IP + ++   +++F 
Sbjct: 69  MLASLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFG 128

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    A   AIF +F    + +  +    +    R+L         S  +   Y+ 
Sbjct: 129 I--------ANKPAIFLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIV 180

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP +MP +   + + +   W   V +EM+ V        G+G  +  +        +L A
Sbjct: 181 VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRYDLVLAA 234

Query: 245 MLTMLGVIFLYDQLL 259
           M ++  + F  D ++
Sbjct: 235 MASIGLLGFCSDLVI 249


>gi|332974746|gb|EGK11662.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Desmospora sp. 8437]
          Length = 569

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 19/236 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   LV+ ++  L        +      +  + +D       +  T   +L+A ++S++ 
Sbjct: 52  VITALVLAVLVYLASRFSIALLTF----LGCLLIDNLGYWDASVETIALVLTATLLSIVI 107

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L A++R    ++ P+LD MQ++P   +L   V +F     G V G   + IF  
Sbjct: 108 GLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFAL---GAVPGIIASIIF-- 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  +  DL E + +F  +  QK + + +P + P ++  +  ++  
Sbjct: 163 ---SMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLAKPTIMAGINQTIML 219

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI  G       G+G+ +  AI   ++       L ++ +  + D++
Sbjct: 220 SLSMVVIASMIGAG-------GLGTVVLQAITRLEVGRGFEGGLCIVIIAIVLDRV 268



 Score = 95.0 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 16/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      +   V   + + +  + +   T+   L +  LG       T+  V+   +++
Sbjct: 45  VLTAAPPVITALVLAVLVYLASRFSIALLTFLGCLLIDNLGYWDASVETIALVLTATLLS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GI         S I P    +   PA V+    V   +   +   +   +   
Sbjct: 105 IVIGLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFALGAVPGIIASIIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +     G      D  E A +F  T  +    + LP   P  + G       +
Sbjct: 163 --SMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLAKPTIMAGINQTIMLS 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +  +++ +   G       GLG  + ++  +        G L +    + L+R
Sbjct: 221 LSMVVIASMIGAG-------GLGTVVLQAITRLEVGRGFEGGLCIVIIAIVLDR 267


>gi|308067985|ref|YP_003869590.1| glycine/betaine-binding protein precursor [Paenibacillus polymyxa
           E681]
 gi|305857264|gb|ADM69052.1| Glycine betaine-binding protein precursor [Paenibacillus polymyxa
           E681]
          Length = 618

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 22/243 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F+++IGII  ++  +Q T     ++  + I  D          T   ++++ ++S++ 
Sbjct: 50  LVFIVIIGIIAFMIGRVQLTL--FTVIGFLLI--DNLGYWSETMNTLGLVITSALVSIVI 105

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A S+    ++ P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 106 GIPIGIWCAYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +  +L E S +F  +  QK + + +P ++P L+  +  ++  
Sbjct: 163 P-----PTIRMTNLGIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIML 217

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               VV + MI          GIG+ +  A+ +  +     A L ++ +  + D+    L
Sbjct: 218 SLSMVVIASMI-------GAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNL 270

Query: 260 FRP 262
           F+P
Sbjct: 271 FKP 273



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 13/226 (5%)

Query: 349 FCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F V+ G+   +    Q   + V  F   D L        T+  V+   +++ +I IP+GI
Sbjct: 52  FIVIIGIIAFMIGRVQLTLFTVIGFLLIDNLGYWSETMNTLGLVITSALVSIVIGIPIGI 111

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W  +    S  I P    +   PA V+    +  V+++ L     +   +IF      + 
Sbjct: 112 WCAYSKSASRIITPLLDFMQTMPAFVYL---LPAVTFFSLGVVPGVIASVIF-AIPPTIR 167

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G      +  E + +F  T  +    + LP   P  + G       + +  +++ +
Sbjct: 168 MTNLGIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLSMVVIASM 227

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                      G+GA +  +  +    +     L +    + L+RF
Sbjct: 228 IG-------AEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRF 266


>gi|257487776|ref|ZP_05641817.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330985354|gb|EGH83457.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008505|gb|EGH88561.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 283

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 40  VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRNGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 265 EKRFLAWRDTFTGQSREGR 283



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRNGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|290955278|ref|YP_003486460.1| glycine betaine ABC transporter transmembrane protein [Streptomyces
           scabiei 87.22]
 gi|260644804|emb|CBG67889.1| putative glycine betaine ABC transport system integral membrane
           protein [Streptomyces scabiei 87.22]
          Length = 672

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 75/522 (14%), Positives = 166/522 (31%), Gaps = 54/522 (10%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           F+  ++      R  P     L  V + G ++      +   +           L +  L
Sbjct: 106 FVQELISQPSVGRPLP-QIGWLGVVGIAGYVSWAFGNWRVALLAVAGFTF----LGLQGL 160

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q +  T    +SA++++LLF       A  S R+  +  P+LD MQ++P   +L    +
Sbjct: 161 WQESMDTLALTVSAVLVALLFGIPLGVWAGLSDRVNRIATPLLDFMQTMPTFVYLAPLTL 220

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+            +A  A               ++  +P    E + S   +  Q   
Sbjct: 221 FFLIGG--------ASATIATVVYAAPPAIRITAHAIRTVPETTVEAADSLGATRRQALL 272

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+   
Sbjct: 273 KVLLPMSKRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 325

Query: 242 LYAMLTMLGVIFLYDQ-------------------LLFRPMIVWSNKFRLERTTGIYPAD 282
             A L+++ +  + D+                   L +R  ++ +          +    
Sbjct: 326 FNAGLSIVVMAIVLDRVTTAASTREEEARRSKNRFLAWRRPLLGAGAVLTAVLVYMSHTY 385

Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY 342
            W      +      I  ++    + + +N+  +   +  +  +   N  Q        +
Sbjct: 386 VWAAEFPGEGGLGSSIASAADTTTTWVQDNLSGVTNAVRDLITNGLLNPFQSLLTDSPWW 445

Query: 343 MLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           ++      +   +    A       +G +V    + D          T+   VV  I+  
Sbjct: 446 LVGAVLVALGVVLGGRRAGITTAVCVGLLVATGMWSD-------SMTTLASTVVATILVM 498

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++ +  G+W+G    +   ++P        P  V+    ++          +   +    
Sbjct: 499 LLGVGFGVWMGRSRLVDRMLRPSLDAAQVMPPFVYLVPFLALFGATRFTAIVAAIVYAAP 558

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                I      G    P    E A+S     W+    + LP
Sbjct: 559 VAMKII----ADGVRNVPATTVEAATSAGCNTWQIITKVQLP 596


>gi|253689683|ref|YP_003018873.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251756261|gb|ACT14337.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 422

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +++   +  ++  I +        A  T   +L+A+   +
Sbjct: 168 LLGMPAPIAILVFSLLAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 227

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 228 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 284

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 285 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 339

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 340 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 390



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +           P           
Sbjct: 130 PLDSWV------THGIDWVVLHFRPVFQGVRVPVDFILSGFQQFLLGMPAPI-------- 175

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    IT+  V+  +    +
Sbjct: 176 ---AILVFSLLAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 228

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 229 IGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 284

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 285 ALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 344

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 345 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 390


>gi|33415329|gb|AAQ18182.1| NasE [Rhodobacter capsulatus]
          Length = 289

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 23/247 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDI---------VPITLDVHSLPQYASRTTLRM 72
           +L    ++G+   L         P DI                     L      +  R+
Sbjct: 45  VLVIAAILGLWQALSAPGAALPAPLDIWATSGDLIMHPFYVAGSQDMGLGWRVLTSLGRV 104

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                ++ +   +   +  +S  L   + P+  +++++P L +L  ++  FM+  P    
Sbjct: 105 GVGFGLAAVVGVIVGAVLGQSAWLMRGVDPLFQVLRTVPPLAWLPISLAAFMDSRP---- 160

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +AIF IF + +W +  +    +  IP+D   V+   RL+  + F  + VP + P +
Sbjct: 161 ----SAIFVIFITAIWPILINTAAGVRAIPQDYRNVAAVLRLNPLEFFVKIMVPAAAPYI 216

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + + +   W  +VA+EM+  G       GIG +I  A     L  I  A+L +    
Sbjct: 217 FSGLRIGVGLAWLAIVAAEMLTGGV------GIGFFIWDAWNSSMLTDIFVALLYIGATG 270

Query: 253 FLYDQLL 259
           F  D+L+
Sbjct: 271 FALDRLV 277



 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 109/268 (40%), Gaps = 16/268 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIV 368
            +    R   + R   P     +     ++ +L ++      G A+      W + G ++
Sbjct: 20  ALPPPARKPILKRLQKPLVENVIPPVLVIAAILGLWQALSAPGAALPAPLDIWATSGDLI 79

Query: 369 NHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            H  Y      + + W    ++ RV V   +A+++ + VG  +G    +   + P  Q+L
Sbjct: 80  MHPFYVAGSQDMGLGWRVLTSLGRVGVGFGLAAVVGVIVGAVLGQSAWLMRGVDPLFQVL 139

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P+ ++      ++       ++     W IL N  AG  A P D++ VA+ 
Sbjct: 140 RTVPPLAWLPISLAAF----MDSRPSAIFVIFITAIWPILINTAAGVRAIPQDYRNVAAV 195

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +    ++  I++P   PY  +G     G AW A + +E+ + G       G+G +I +
Sbjct: 196 LRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGG------VGIGFFIWD 249

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       ++ + +L +     AL+R +
Sbjct: 250 AWNSSMLTDIFVALLYIGATGFALDRLV 277


>gi|330961000|gb|EGH61260.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 282

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 18/258 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  VL+  I+ I      +   P +I+  +   L   +L ++ S + LR+LS  +I    
Sbjct: 40  LVIVLLEIIVRIGWLPSYQMPAPSEILLTLR-DLADGALWKHISASLLRVLSGFLIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++       K++   + A F +
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKIVMIAIGAFFPV 158

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +         +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 159 Y--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 AWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTG 277
            +  + W + F  +   G
Sbjct: 265 EKRFLAWRDTFNGQSREG 282



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 16/252 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385
           PE  L   S  R+  ++      V+  + + I W     +         L  +  G +  
Sbjct: 20  PERNLWQRSGTRLKGLVVPALVIVLLEIIVRIGWLPSYQMPAPSEILLTLRDLADGALWK 79

Query: 386 ----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +
Sbjct: 80  HISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWL 139

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +      +++  G  + +  N +A          EV   +  + +R  R I+LP 
Sbjct: 140 GIGETSK----IVMIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPA 195

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG  +    AW   + +E+ +       T GLG  +++  E      V+  +++
Sbjct: 196 ALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIV 249

Query: 562 MCCFVLALNRFL 573
           +       +  L
Sbjct: 250 LATLGKLSDGLL 261


>gi|197284311|ref|YP_002150183.1| glycine betaine transporter membrane protein [Proteus mirabilis
           HI4320]
 gi|194681798|emb|CAR41030.1| glycine betaine/L-proline ABC transporter, permease protein
           [Proteus mirabilis HI4320]
          Length = 409

 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I + +++   +    +      I  I +        A  T   +L++++  L+    
Sbjct: 159 PVAIILFSLIAWQLSGKVMGISAF-ISLILIGAIGAWSEAMITLALVLTSLLFCLIIGLP 217

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 218 LGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 270

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E ++SF  +  Q  + + +P +MP ++  +  ++     
Sbjct: 271 -LPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+         ++ +  + D+L
Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 91/293 (31%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV         +            P+   +      L  +          L + Q 
Sbjct: 115 PLDSWVTDGIDW--IVLHFRPIFQGIRVPVDLVLGGFENFLTSMPAPVAIILFSLIAWQL 172

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              ++ I  F  +  +    AW                       IT+  V+  ++   I
Sbjct: 173 SGKVMGISAFISLILIGAIGAWS-------------------EAMITLALVLTSLLFCLI 213

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      S  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 214 IGLPLGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 269

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 270 ALPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G   +    + L+R 
Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375


>gi|297618911|ref|YP_003707016.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377888|gb|ADI36043.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
          Length = 253

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 9/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +    T      +I    I++ RV+   ++A  + +P+GI +G+   ++     F +LL
Sbjct: 40  LLNPTMTLLGTGTIIDNSIISITRVLTGFLVAFAVAVPLGIMMGYYKPVNDIFDTFMELL 99

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++       +    + +   F     IL N +AG    PN   E + +
Sbjct: 100 RPIPPLAWVPLTLAWFGVGSTSIIFIIFIGAFFP----ILINTVAGVKEVPNILVEASKT 155

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              TG    R +I+P   P  +TG     G AW   + +E+          +GLG  I  
Sbjct: 156 LGCTGINVLRKVIIPAASPSILTGLRVGAGIAWMCVVAAEMLPGSD-----SGLGYLIMY 210

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        +V  ++++    + L+R L
Sbjct: 211 AYSLSRMDIIVAAMIVIGLIGIVLDRGL 238



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 98/244 (40%), Gaps = 19/244 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           LL  ++VI      ++  + T +PR       +++     L   ++   +  +  R+L+ 
Sbjct: 8   LLPALVVIAWEVFAIYLGKPTVIPRLEAIVAVLLNPTMTLLGTGTIIDNSIISITRVLTG 67

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +++         +    + +  +    +++++ IP L ++  T+ +F       +    
Sbjct: 68  FLVAFAVAVPLGIMMGYYKPVNDIFDTFMELLRPIPPLAWVPLTLAWFGVGSTSIIFIIF 127

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + A F I          +    +  +P  L E S++   +G      + +P + P ++  
Sbjct: 128 IGAFFPIL--------INTVAGVKEVPNILVEASKTLGCTGINVLRKVIIPAASPSILTG 179

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +     W  VVA+EM+   D+     G+G  I  A     +  I+ AM+ +  +  + 
Sbjct: 180 LRVGAGIAWMCVVAAEMLPGSDS-----GLGYLIMYAYSLSRMDIIVAAMIVIGLIGIVL 234

Query: 256 DQLL 259
           D+ L
Sbjct: 235 DRGL 238


>gi|289627199|ref|ZP_06460153.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648668|ref|ZP_06480011.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868036|gb|EGH02745.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 283

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 40  AIIVLLEIIVRIGWLPSYQMPAPSEIVLTLS-DLADGALWKHISASLLRVLSGFVIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 265 EKRFLAWRDTFTGQSREGR 283



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|302186230|ref|ZP_07262903.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 282

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 18/258 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 40  VIIVLLEIIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + + LS ++    + +P ++PGL   +   MS 
Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR- 261
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL R 
Sbjct: 211 SWMFLVAAELIAASK------GLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLARL 264

Query: 262 --PMIVWSNKFRLERTTG 277
               + W + F  +   G
Sbjct: 265 EKRFLAWRDTFNGQSREG 282



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       + GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ASKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFLWH 575
                +  L  
Sbjct: 253 LGKLSDGLLAR 263


>gi|182416893|ref|ZP_02948277.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum 5521]
 gi|237667160|ref|ZP_04527144.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379191|gb|EDT76692.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum 5521]
 gi|237655508|gb|EEP53064.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 256

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV+   +IA I+ + +GI IG    +    +   Q+L   P   + PL
Sbjct: 59  GQLMSNILASVCRVLEGFVIALILALILGIGIGLSKKLEIFTEITFQILKPIPPIAWIPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +       +++ G  + IL NVI G       + E+   + +   ++ + 
Sbjct: 119 AIIWFGIGESSK----IFIIVLGAFFPILLNVIDGIKNIDPKYLELEKVYEVKKIKFIKG 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  PY +TG     G AW   + +E+ +       T G+G  + +         V+
Sbjct: 175 VILPGALPYIMTGIRVGLGNAWVCVVAAEMIA------ATKGVGYMLTDGRNLSRPDLVI 228

Query: 557 LGVLIMCCFVLALN 570
           LG+LI+      ++
Sbjct: 229 LGMLIIGIVGKIMD 242



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 82/216 (37%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++     L    L      +  R+L   VI+L+   +       S++L +   
Sbjct: 42  MPTPEKVIETTGEILRNGQLMSNILASVCRVLEGFVIALILALILGIGIGLSKKLEIFTE 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
               I++ IP + ++   +++F           E + IF I     + +  ++   + NI
Sbjct: 102 ITFQILKPIPPIAWIPLAIIWFGIG--------ESSKIFIIVLGAFFPILLNVIDGIKNI 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E+ + + +   +    + +P ++P ++  + + +   W  VVA+EMI        
Sbjct: 154 DPKYLELEKVYEVKKIKFIKGVILPGALPYIMTGIRVGLGNAWVCVVAAEMIA------A 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G  +           ++  ML +  V  + D 
Sbjct: 208 TKGVGYMLTDGRNLSRPDLVILGMLIIGIVGKIMDD 243


>gi|227358548|ref|ZP_03842873.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|227161259|gb|EEI46333.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 409

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I + +++   +    +      I  I +        A  T   +L++++  L+    
Sbjct: 159 PVAIILFSLIAWQLSGKVMGISAF-ISLILIGAIGAWSEAMITLALVLTSLLFCLIIGLP 217

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 218 LGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 270

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E ++SF  +  Q  + + +P +MP ++  +  ++     
Sbjct: 271 -LPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+         ++ +  + D+L
Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 91/293 (31%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV         +            P+   +      L  +          L + Q 
Sbjct: 115 PLDSWVTDGIDW--IVLHFRPIFQGIRVPVDLVLGGFENFLTSMPAPVAIILFSLIAWQL 172

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              ++ I  F  +  +    AW                       IT+  V+  ++   I
Sbjct: 173 SGKVMGISAFISLILIGAIGAWS-------------------EAMITLALVLTSLLFCLI 213

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      S  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 214 IGLPLGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 269

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 270 ALPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G   +    + L+R 
Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375


>gi|66045751|ref|YP_235592.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256458|gb|AAY37554.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330971226|gb|EGH71292.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 282

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   ++I ++ +++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS   I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG-- 142

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + I  I     + +  +   ++  I R L EV + + LS ++    + +P +
Sbjct: 143 ------ETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    +  + W + F  +   G
Sbjct: 251 ATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282



 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|331014291|gb|EGH94347.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 282

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 17/258 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++V+ I+  +             + +    L   +L ++ S + LR+LS  +I    
Sbjct: 39  ALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLRDLADGALWKHISASLLRVLSGFLIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++       KV+   + A F +
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPV 158

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +         +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 159 Y--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 AWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTG 277
            R  + W + F  +    
Sbjct: 265 ERRFLAWRDTFNGQSRED 282



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|330965303|gb|EGH65563.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 282

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   L+I ++ I++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPTLIIVVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS  +I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+   + A F ++         +   ++  I R L EV + +  S ++    + +P +
Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    R  + W + F  +    
Sbjct: 251 ATLGKLSDGLLAGLERRFLAWRDTFNGQSRED 282



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|330953436|gb|EGH53696.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 281

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 19/259 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            A ++++ +I  +      +   P +IV  +   L   +L ++ S + LR+LS  VI   
Sbjct: 38  AAIIVLLEVIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGAS 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V+A     SR     L P    ++SIP L ++   +++            E + I  
Sbjct: 97  LALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +   ++  I R L EV + + LS ++    + +P ++PGL   +   MS
Sbjct: 149 IAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMS 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
             W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL  
Sbjct: 209 LSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAN 262

Query: 261 --RPMIVWSNKFRLERTTG 277
             +  + W + F  +   G
Sbjct: 263 LEKRFLAWRDTFNGQSREG 281



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 82  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 142 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 198 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 251

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 252 LGKLSDGLL 260


>gi|317049220|ref|YP_004116868.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316950837|gb|ADU70312.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 281

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 109/277 (39%), Gaps = 29/277 (10%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R+H P        + R+   L + +F +   V    A  +   +V+     D + ++
Sbjct: 16  APRRWHNPLMVPLKAISTRLRIGLGVAFFVLFVAV---WALVTFSGMVSPTFLADPITML 72

Query: 381 WLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
             G              +T+ RV+   ++A++I +P+GI +G      + ++PF      
Sbjct: 73  EQGVSLFTEYNFSLDIGMTVMRVLAGFLLAALIGVPLGIMMGAYKMWEAFLEPFVSFCRY 132

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA+ F PL++       +       L++  G+ + I+  V    S+   D  E A +  
Sbjct: 133 LPASAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLG 188

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +     R +++PG  P          G AW   IV+E+          +G+G  I +S 
Sbjct: 189 CSNRSIVRRVLIPGAAPGIAELLRLVLGWAWTYVIVAELIG------SESGIGHMIVDSQ 242

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYG 581
              +  +++ G++++ C  L  +         L+ + 
Sbjct: 243 ALLNTGQIIFGIIVIGCIGLVSDYLFKVANRRLFAWS 279



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 92/251 (36%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + FV V  ++             P  +++        ++       T +R+L+  +++ 
Sbjct: 44  FVLFVAVWALVTFSGMVSPTFLADPITMLEQGVSLFTEYNFSLDIGMTVMRVLAGFLLAA 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       +    +     L P +   + +P   F+   +++            E+  I 
Sbjct: 104 LIGVPLGIMMGAYKMWEAFLEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKIL 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  ++ +  RDL E + +   S       + +P + PG+   + + +
Sbjct: 156 VIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLGCSNRSIVRRVLIPGAAPGIAELLRLVL 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D L  
Sbjct: 216 GWAWTYVIVAELIG------SESGIGHMIVDSQALLNTGQIIFGIIVIGCIGLVSDYLFK 269

Query: 261 ---RPMIVWSN 268
              R +  WSN
Sbjct: 270 VANRRLFAWSN 280


>gi|225867769|ref|YP_002743717.1| glycine-betaine binding permease [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701045|emb|CAW97837.1| putative glycine-betaine binding permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 576

 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +++    +     ++  +P   +  +    +   L      T   +L A +IS+L  
Sbjct: 54  LLFMLLVTCAMFFLARKKWPLPTFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK++ +  V+ P+LD+MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++  IP +L E S +F  +  QK   + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TSLAIRQIPTELIEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L +              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  INPLLFMLLVTCAMFFLARKKWPLPTFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GIW+     +   I P   L+   PA V+    V+      +       +     
Sbjct: 111 LGIPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTSLAIRQIPTELIEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272


>gi|158425998|ref|YP_001527290.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158332887|dbj|BAF90372.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 270

 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 12/260 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L R+    RF  P   L L   +  S    +    +    A+  AW    + ++  T 
Sbjct: 2   AMLLRSWRPERFVVP--VLILAGWEMFSRSGALPPALLPAPSAVAWAWLDWVFDIDGNTQ 59

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
               + I+    + +RV     IA+++ + +G+ IG+   I   I+P  Q+L   P   +
Sbjct: 60  SYAGHWIFDVMASTWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSW 119

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +                L+  G  + IL N I G      +     +       + 
Sbjct: 120 IPLAIIWFGIADK----PAIFLVFLGAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQL 175

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+I+LP   P    G     G AW  ++ +E+ +        +G+G  + +S     + 
Sbjct: 176 LRFIVLPAAMPSIFAGLRIGIGSAWMLTVTAEMVA------VKSGVGYVLWDSYYFLRYD 229

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+  +  +       +  +
Sbjct: 230 IVLAAMASIGLLGYLSDLLI 249



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 78/194 (40%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +T R+ +   I+ +           SR + + + P L +++ IP + ++   +++F  
Sbjct: 70  MASTWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSWIPLAIIWFGI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   A+  AIF +F    + +  +    +  + R+L            Q   ++ +
Sbjct: 130 --------ADKPAIFLVFLGAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQLLRFIVL 181

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + + +   W   V +EM+ V        G+G  +  +        +L AM
Sbjct: 182 PAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDIVLAAM 235

Query: 246 LTMLGVIFLYDQLL 259
            ++  + +L D L+
Sbjct: 236 ASIGLLGYLSDLLI 249


>gi|261822715|ref|YP_003260821.1| glycine/betaine ABC transporter [Pectobacterium wasabiae WPP163]
 gi|261606728|gb|ACX89214.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 400

 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +++   +  ++  I +        A  T   +L+A+   +
Sbjct: 146 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 205

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 206 LIGLPMGIWLARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 262

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 263 A-----LPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 317

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 318 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 368



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +           P           
Sbjct: 108 PLDSWV------THGIDWVVLHFRPIFQGIRVPVDFILGGFQQFLLGMPAPI-------- 153

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    IT+  V+  +    +
Sbjct: 154 ---AILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 206

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 207 IGLPMGIWLARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 262

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 263 ALPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 322

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 323 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 368


>gi|330875029|gb|EGH09178.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 282

 Score =  136 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   L+I ++ I++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPALIIVVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+ S  +I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+   + A F ++         +   ++  I R + EV + +  S ++    + +P +
Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    R  + W + F  +    
Sbjct: 251 ATLGKLSDGLLAGLERRFLAWRDTFNGQSRED 282



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV    +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|297197996|ref|ZP_06915393.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
 gi|197715001|gb|EDY59035.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
          Length = 665

 Score =  136 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 82/592 (13%), Positives = 182/592 (30%), Gaps = 56/592 (9%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           F+ +++      R  P     L  V + G ++  +   +   +           L +  L
Sbjct: 99  FVQDLISQPSGDRPVP-QIGWLGVVGLAGYVSWAVANWRVALLAVAGFTF----LGLQGL 153

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q +  T    LSA++++LLF       A  S R+  ++ P LD MQ++P + +L    +
Sbjct: 154 WQESMDTLSLTLSAVLVALLFAIPLGVWAGLSERVNRIVTPFLDFMQTMPTMVYLAPLTL 213

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+            +A  A               ++ ++P    E + S   +  Q   
Sbjct: 214 FFLIGG--------ASATIATVIYAAPPALRITAHAIRSVPPTTVEAAESMGATRRQSLL 265

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+   
Sbjct: 266 KVLLPMSRRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 318

Query: 242 LYAMLTMLGVIFLYDQL-------------LFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
             A L ++ +  + D++                P++ W     +        A + VL  
Sbjct: 319 FNAGLAIVVMAIVLDRVTTAASERAEAARRSGNPLLKWRRHLLV-----AGGAVAAVLVY 373

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM----- 343
              T              S ++     +              F  + +N  ++       
Sbjct: 374 LSHTYLWAAEFPGDGGTGSTIAKAADNVTTWAQDHLSGLTNGFRDVITNGLLNPFQTLLT 433

Query: 344 ---LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
                +    +V    +   W++               V   G  T+   VV  ++  ++
Sbjct: 434 DSPWWLVGAALVGIAVVLGGWRAGITTAVCVGLLVATGVWSDGMTTLASTVVATVLVMLL 493

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +  G+W+G    +   ++P        P  V+    ++          +   +      
Sbjct: 494 GMVFGVWMGRSALVDRLVRPTLDAAQVMPPFVYLVPFLALFGATRFTAIVAAIVYAAPVA 553

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I      G    P    E A+S     W+    + LP                  + 
Sbjct: 554 IKII----ADGVRTVPAATVEAATSSGCNTWQIITKVQLPMARSALTLATNQGLIYVLSM 609

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +V  +   G +          +A  ++   + + +   L +    +  +R 
Sbjct: 610 VVVGGLVGAGALGYDV------VAGFSQGQLYGKGLAAGLAIVLLGVMFDRI 655


>gi|320324033|gb|EFW80116.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329022|gb|EFW85021.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 283

 Score =  136 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 40  VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 265 EKRFLAWRDTFTGQSREGR 283



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|302059728|ref|ZP_07251269.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
          Length = 282

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   L+I ++ I++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS   I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+   + A F ++         +   ++  I R L EV + +  S ++    + +P +
Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    +  + W + F  +    
Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|213966988|ref|ZP_03395138.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301385173|ref|ZP_07233591.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302134136|ref|ZP_07260126.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928310|gb|EEB61855.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 282

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   L+I ++ I++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS  +I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+   + A F ++         +   ++  I R L EV + +  S ++    + +P +
Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    +  + W + F  +    
Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|167462264|ref|ZP_02327353.1| putative ABC transporter, proline/glycine betaine permease protein
           [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322383435|ref|ZP_08057217.1| ABC transporter proline/glycine betaine permease-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152288|gb|EFX45112.1| ABC transporter proline/glycine betaine permease-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 575

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 101/233 (43%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I ++++++  +    +       + +  ++     +   T  ++L++ VIS++    
Sbjct: 51  FVMIAVLSLIILAVARWRMALFTFIGLLLVFNLGY-WDHTMMTLSQVLTSAVISIVLGVP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+   +  V+ P+LD MQ++P   +L   V +F     G V G   + +FAI   
Sbjct: 110 IGILCARRNGVQKVVTPLLDFMQTMPAFVYLLPAVSFFSL---GVVPGVIASVVFAIP-- 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +P DL E + +F  +  QK   L +P ++P ++  +  ++     
Sbjct: 165 ---PTIRLTNLGIRQVPMDLVEAADAFGSTPMQKLVKLQLPLAVPSIMAGINQTIMLSLS 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV S MI          G+GS +  A+ +  + +   A + ++ +  + D+ 
Sbjct: 222 MVVISSMI-------GAQGLGSDVYRAVTQNKIGSGFEAGVAVVILAIILDRF 267



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    + V+  V   I      + +  FT+  +L V  LG      +T+ +V+   +I
Sbjct: 43  WLLQSVPWFVMIAVLSLIILAVARWRMALFTFIGLLLVFNLGYWDHTMMTLSQVLTSAVI 102

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + ++ +P+GI    R  +   + P    +   PA V+    +  VS++ L     +   +
Sbjct: 103 SIVLGVPIGILCARRNGVQKVVTPLLDFMQTMPAFVYL---LPAVSFFSLGVVPGVIASV 159

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +F      +     G    P D  E A +F  T  +    + LP   P  + G       
Sbjct: 160 VF-AIPPTIRLTNLGIRQVPMDLVEAADAFGSTPMQKLVKLQLPLAVPSIMAGINQTIML 218

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  ++S +           GLG+ +  +  +          + +    + L+RF
Sbjct: 219 SLSMVVISSMIG-------AQGLGSDVYRAVTQNKIGSGFEAGVAVVILAIILDRF 267


>gi|27378403|ref|NP_769932.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351551|dbj|BAC48557.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 283

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 88/264 (33%), Gaps = 12/264 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+    +      G+ R   P   +        S ML          V   +     G+
Sbjct: 8   APVKPAFRLTRAFQGLERVVVPALLIAGWEAFARSGMLPPALLPAPSAVLHALGDWVFGF 67

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                TY    + +     +  RV     +AS + I  G+ IG+       ++P  Q+L 
Sbjct: 68  DETTQTYS--GHWLRDALASALRVFGGFALASALGILAGVAIGWSRLFEKTLEPTLQMLR 125

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   + PL +                L+  G  + +L N I G     ++     +  
Sbjct: 126 PIPPVSWIPLAIIWFGIADK----PAIFLVFLGAFFPVLMNSIHGVKTVDHNLVRAGAMM 181

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +    I+LP   P    G   A G AW  ++ +E+ +        +GLG  + +S
Sbjct: 182 GASQRQMLTDIVLPAALPSIFAGLRIAVGSAWMLTVTAEMVA------VKSGLGYVLWDS 235

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
                +  V+  ++ +       +
Sbjct: 236 YYFLRYDIVLAAMISIGLLGYLSD 259



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 85/222 (38%), Gaps = 15/222 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
               + A  + LR+     ++     +       SR     L P L +++ IP + ++  
Sbjct: 76  GHWLRDALASALRVFGGFALASALGILAGVAIGWSRLFEKTLEPTLQMLRPIPPVSWIPL 135

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F          A+  AIF +F    + +  +    +  +  +L         S  Q
Sbjct: 136 AIIWFGI--------ADKPAIFLVFLGAFFPVLMNSIHGVKTVDHNLVRAGAMMGASQRQ 187

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +   + +++   W   V +EM+ V        G+G  +  +      
Sbjct: 188 MLTDIVLPAALPSIFAGLRIAVGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRY 241

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
             +L AM+++  + +L D L  + ++  + +++   T     
Sbjct: 242 DIVLAAMISIGLLGYLSD-LGLKAIMARTLRWQQTTTVQGRA 282


>gi|83310958|ref|YP_421222.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82945799|dbj|BAE50663.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 294

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R+     +A+I+ +P+GI +G    + S + P  ++L   PA  + P+ +     
Sbjct: 92  AMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSIML--- 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  +   G+ + IL N + G +A        + S        +R++ LPG  
Sbjct: 149 -WPSNEESIVFITFLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPGAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG     G AW + I +E+ S         G+G +  E+     + ++VLG+L++ 
Sbjct: 208 PHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYALVQYADIVLGMLLIG 261

Query: 564 CFVLA---LNRFLWHPLYLYG 581
              LA   L R L   +  + 
Sbjct: 262 VLGLASSGLIRLLGRAVMPWS 282



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++    +        ++ + +  R+ +   ++ +          +   L   + P
Sbjct: 69  PSPEAVLRRALVAFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYP 128

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++++++ IP + ++  +++ +           E + +F  F    + +  +    +  I 
Sbjct: 129 VVEVLRPIPAIAWVPMSIMLW--------PSNEESIVFITFLGSFFPILINTLHGVAAID 180

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   SRS        F ++ +P ++P +   + + M   W  ++A+EMI         
Sbjct: 181 PALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISG------Q 234

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267
            GIG +   A        I+  ML +  +        +LL R ++ WS
Sbjct: 235 FGIGYFTWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWS 282


>gi|225869714|ref|YP_002745661.1| glycine-betaine binding permease protein [Streptococcus equi subsp.
           equi 4047]
 gi|225699118|emb|CAW92301.1| putative glycine-betaine binding permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 576

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +++    +     ++  +P   +  +    +   L      T   +L A +IS+L  
Sbjct: 54  LLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK++ +  V+ P+LD+MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        +L +IP +L E S +F  +  QK   + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+     + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L +              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  INPLLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GIW+     +   I P   L+   PA V+    V+      +       +     
Sbjct: 111 LGIPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  T  +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272


>gi|70730546|ref|YP_260287.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344845|gb|AAY92451.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5]
          Length = 254

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R++V +++A +I +P+G+ +G   H+ +   P  Q L       + P+VV  +  
Sbjct: 65  LVSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGV 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +  +  L+ F   W IL N  AG       + +++ S   T W   R +ILPG+ 
Sbjct: 125 G----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLRKVILPGVL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG   + G  W   +  E+         + GLG +I ++ ++ ++ E++  VL++ 
Sbjct: 181 GHVLTGVRLSIGILWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIG 234

Query: 564 CFVLALNRF 572
               AL+  
Sbjct: 235 VLGFALDAL 243



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 14/196 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   +  R+L  ++++LL       L    R L     P    ++ I  L ++   V+ 
Sbjct: 62  EHVLVSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVML 121

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +    F +  + +W +  +    +  +     ++SRS   + W+    
Sbjct: 122 MGVG--------DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLRK 173

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P  +  ++  + +S+   W  +V  EM+ V        G+G +I           ++
Sbjct: 174 VILPGVLGHVLTGVRLSIGILWIVLVPCEMLGVSA------GLGYFILDTRDRLAYSELM 227

Query: 243 YAMLTMLGVIFLYDQL 258
             +L +  + F  D L
Sbjct: 228 AMVLLIGVLGFALDAL 243


>gi|149925532|ref|ZP_01913796.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Limnobacter sp. MED105]
 gi|149825649|gb|EDM84857.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Limnobacter sp. MED105]
          Length = 329

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 97/297 (32%), Gaps = 25/297 (8%)

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           + + +         +        +  +   R    +    P   L L S ++ S    + 
Sbjct: 19  VVKASTLAPGAKEPALQAVDAPGSAPRVAARAKAEVAEKLPARELFLISAKKHSLAALMT 78

Query: 348 WFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGC-------------ITMFRVVV 392
           +  +   VA         + + V          V                   ++ R++ 
Sbjct: 79  FLSIGALVAFWYVATLYRLDFYVRFNNIPTPGEVFTNMVELMQNQRFQTNIWKSVVRIMQ 138

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A+ + + +G+  G    +   + P  ++L   PA  + P+ +        +    +
Sbjct: 139 GFAMATALGVTLGLLCGRFAVVRGLMFPALEVLRPIPAIAWVPISIMLWPTTESS----I 194

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             +   G  + IL N +AG           A S     +     +ILP   P   TG   
Sbjct: 195 IFITFIGAFFPILINTMAGVKGVDPVLLRAAKSLGANEFTMLTKVILPAALPNVFTGLAV 254

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             G AW + I +E+ S         G+G +  E+     +P +VLG++++    L  
Sbjct: 255 GMGVAWVSLIAAEMISG------QFGVGYFTWEAYSLIEYPNIVLGMIVIGVLGLLC 305



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 81/204 (39%), Gaps = 17/204 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           ++ +R++    ++         L  +   +  ++ P L++++ IP + ++  +++ +   
Sbjct: 131 KSVVRIMQGFAMATALGVTLGLLCGRFAVVRGLMFPALEVLRPIPAIAWVPISIMLW--- 187

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E + IF  F    + +  +    +  +   L   ++S   + +     + +P
Sbjct: 188 -----PTTESSIIFITFIGAFFPILINTMAGVKGVDPVLLRAAKSLGANEFTMLTKVILP 242

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +   + + M   W  ++A+EMI          G+G +   A    +   I+  M+
Sbjct: 243 AALPNVFTGLAVGMGVAWVSLIAAEMISG------QFGVGYFTWEAYSLIEYPNIVLGMI 296

Query: 247 TMLGVIFLY---DQLLFRPMIVWS 267
            +  +  L      LL R ++ W 
Sbjct: 297 VIGVLGLLCSGGILLLARLLMPWQ 320


>gi|319893575|ref|YP_004150450.1| ABC transporter permease protein [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317163271|gb|ADV06814.1| ABC transporter permease protein [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 254

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R +V  +IA ++ IP+GI +G    +   I+P  Q +       + P 
Sbjct: 54  GEIFLHLGISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V       L     + +   F     I+FN I G     N + ++A + ++ GW  +R 
Sbjct: 114 IVLWFGIGSLPAIFIIFIAAFFP----IVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRD 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II PG F + ++G   A G +W   +  E+          +GLG  I +S    +  +V+
Sbjct: 170 IIFPGAFKHIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++R +
Sbjct: 224 SAIFFIGIFGFLIDRII 240



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 101/248 (40%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           ++     +    F+L+   +I I  +       P  +   +   +    +  +   +  R
Sbjct: 7   KKYLRPFYTFALFLLLWQCVIWIGHYQPVLLPGPVHVAQSIGNFIITGEIFLHLGISLYR 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   +I+++       L  ++R L   + P+L  ++ I  + +  F V++F        
Sbjct: 67  FIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGIG----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L AIF IF +  + + F+  + +  I     +++ +  L GW  +  +  P +   
Sbjct: 122 ---SLPAIFIIFIAAFFPIVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFKH 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++   W F+V+ EMI          G+G  I  +    +L  +L A+  +   
Sbjct: 179 IMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSAIFFIGIF 232

Query: 252 IFLYDQLL 259
            FL D+++
Sbjct: 233 GFLIDRII 240


>gi|150399264|ref|YP_001323031.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
 gi|150011967|gb|ABR54419.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
          Length = 253

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 102/257 (39%), Gaps = 17/257 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-----YVIWLGCIT 386
           +++  N  +  +  + W  +   +   +    +  +VN      V       ++    I+
Sbjct: 1   MKILKNLAIPLLGILAWEFLAIYLNNQVILPKVESVVNILLNPGVGLLGTGNLVENTIIS 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + RV++   IA+++ IP+GI +G+   ++  I    +LL   P   + PL ++       
Sbjct: 61  IKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAWVPLALAWFGIGES 120

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           + +     ++  G  + IL N I+G  + P    E A +   T     + +++P   P  
Sbjct: 121 SMH----FIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGTTKHILKSVVIPASSPDI 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG     G AW   + +E+           GLG  I  +        VV  ++++    
Sbjct: 177 LTGLRVGVGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYLLSRMDVVVASMIVIGIIG 231

Query: 567 LALN---RFLWHPLYLY 580
           +  +   RF+    + +
Sbjct: 232 ILFDKGLRFIEKRYFSW 248



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 81/204 (39%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+L    I+ +       L      +  ++   +++++ IP L +
Sbjct: 48  LGTGNLVENTIISIKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F                F IF    + +  +    + ++P  + E +++   +
Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGT 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P S P ++  + + +   W  VVA+EM+   D      G+G  I  A   
Sbjct: 160 TKHILKSVVIPASSPDILTGLRVGVGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYLL 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ +M+ +  +  L+D+ L
Sbjct: 215 SRMDVVVASMIVIGIIGILFDKGL 238


>gi|302876301|ref|YP_003844934.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|307687036|ref|ZP_07629482.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|302579158|gb|ADL53170.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
          Length = 275

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    I++ RVV   +I++++ I  G+ +G    +          +   P   + PL
Sbjct: 75  GQLIGDATISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAWIPL 134

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V       L+      +++I  + + IL N ++G         EV + ++++ W+ +R 
Sbjct: 135 IVLWFGIGELSK----IIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLSRWKKFRK 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I  P   P    G     G +W A + +E+ +       ++G+G  + ++        V 
Sbjct: 191 IYFPSALPSIFVGLKLGLGISWMAVVGAEIIA------ASSGIGYRMNDARSLMQPEVVF 244

Query: 557 LGVLIMCCFVLALN 570
           +G++++    L ++
Sbjct: 245 VGMIVIALIGLIMD 258



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L   A+ +  R++   +IS +       +   + ++      +   ++ IP+L +
Sbjct: 72  LISGQLIGDATISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAW 131

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V++F           EL+ I  I  +  + +  +    +    + L EV   + LS
Sbjct: 132 IPLIVLWFGIG--------ELSKIIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLS 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+KF  +  P ++P +   + + +   W  VV +E+I          GIG  +  A   
Sbjct: 184 RWKKFRKIYFPSALPSIFVGLKLGLGISWMAVVGAEIIAASS------GIGYRMNDARSL 237

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
                +   M+ +  +  + D +L +
Sbjct: 238 MQPEVVFVGMIVIALIGLIMDFVLTK 263


>gi|330891567|gb|EGH24228.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 283

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 40  VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 99  ALVFAARVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 265 EKRFLAWRDTFTGQSREGR 283



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +     +G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFVIGASLALVFAARVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|332286150|ref|YP_004418061.1| substrate-binding region of ABC-type glycine betaine transport
           system [Pusillimonas sp. T7-7]
 gi|330430103|gb|AEC21437.1| substrate-binding region of ABC-type glycine betaine transport
           system [Pusillimonas sp. T7-7]
          Length = 654

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           + + ++  L        V   +       +    L     +T   +L + ++S++     
Sbjct: 419 VFLLLVAALSWHATRKPVATVLYVACLYLIGAVGLWDKLIQTFALVLVSTLVSIVLGVPI 478

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             +AA+SR L  VL P+LD+MQ++P   +L   ++ F           ++ A+FA     
Sbjct: 479 GIIAARSRLLRRVLTPVLDVMQTLPSFVYLIPVLMLFGLG--------KVPALFATIIYA 530

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +       L  + RD+ E +++F ++ WQ    + +P + P ++  +  +       
Sbjct: 531 VPPLIRLTILGLRQVDRDVMEAAQAFGVTRWQMLTRVTLPLARPSIMAGINQTTMMALAM 590

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  +   I+  D+   L A + ++ +  + D++
Sbjct: 591 VVVASMI-------GARGLGEDVLAGIQTLDVGRGLQAGVAIVILAIVIDRI 635



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 92/279 (32%), Gaps = 18/279 (6%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           +  W+  + ++  +  + +  G   F     F+       V  ++      V   +   +
Sbjct: 369 FPDWSIAALVNQQLMGVVKNYGGF-FRQASGFMLTTVLLPVERLMQAVPPWVFLLLVAAL 427

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +W +    V    Y   LY+I    +      T   V+V  +++ ++ +P+GI       
Sbjct: 428 SWHATRKPVATVLYVACLYLIGAVGLWDKLIQTFALVLVSTLVSIVLGVPIGIIAARSRL 487

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+           +      I      ++   I G  
Sbjct: 488 LRRVLTPVLDVMQTLPSFVYLIPVLMLFGLG----KVPALFATIIYAVPPLIRLTILGLR 543

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  E A +F +T W+    + LP   P  + G       A    +V+ +       
Sbjct: 544 QVDRDVMEAAQAFGVTRWQMLTRVTLPLARPSIMAGINQTTMMALAMVVVASMIG----- 598

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +    +       +   + +    + ++R 
Sbjct: 599 --ARGLGEDVLAGIQTLDVGRGLQAGVAIVILAIVIDRI 635


>gi|270261496|ref|ZP_06189769.1| transporter [Serratia odorifera 4Rx13]
 gi|270044980|gb|EFA18071.1| transporter [Serratia odorifera 4Rx13]
          Length = 287

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 111/291 (38%), Gaps = 28/291 (9%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--IVN 369
            V +L R    +    P     +    R       ++  +   V     W    +  +V+
Sbjct: 7   PVAELEREPAALPPAKPHWHNPMMVPLRPVAGRLRWFLGLAFFVLFVALWGLATFTGLVS 66

Query: 370 HFTYQDVLYVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                D L ++  G              +T+FRV+   ++A+ I +P+GI +G    + +
Sbjct: 67  PTFLADPLTMLREGVLLFTEYDFSLDIGMTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEA 126

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++PF       PA+ F PL++       +       L++  G+ + I+  V     A  
Sbjct: 127 FLEPFVSFCRYLPASAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVTVGAAR 182

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D  E A +   +     R +++PG  P          G AW   IV+E+         +
Sbjct: 183 RDLVEAAYTLGASNRSVVRRVLIPGAAPEIAELLRLVLGWAWTYVIVAELIG------SS 236

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584
           +G+G  I +S    +  +++ G++++ C  L  +         L+++ +  
Sbjct: 237 SGIGHMIVDSQALLNTGQIIFGIIVIGCIGLLSDLLFKAANKRLFIWSSLR 287



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 89/255 (34%), Gaps = 15/255 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           + P     R F  +   + FV + G+     L        P  ++    +    +     
Sbjct: 33  LRPVAGRLRWFLGLAFFVLFVALWGLATFTGLVSPTFLADPLTMLREGVLLFTEYDFSLD 92

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+LS  +++         +    + +   L P +   + +P   F+   +++  
Sbjct: 93  IGMTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEAFLEPFVSFCRYLPASAFVPLLILWAG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E+  I  IF    + +   +  ++    RDL E + +   S       + 
Sbjct: 153 IG--------EMQKILVIFIGSFFQIVLMVAVTVGAARRDLVEAAYTLGASNRSVVRRVL 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   I++ 
Sbjct: 205 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVDSQALLNTGQIIFG 258

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  +  L D L 
Sbjct: 259 IIVIGCIGLLSDLLF 273


>gi|163740809|ref|ZP_02148202.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
 gi|161385800|gb|EDQ10176.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
          Length = 650

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 79/540 (14%), Positives = 167/540 (30%), Gaps = 56/540 (10%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L V      A  T   +L A+ I      +    A +      +L P+LD+MQ+IPI  +
Sbjct: 130 LAVFGQWDSAMVTLASVLIAVPIGAGGGLLTGIWAYRHPVGERILSPLLDLMQTIPIFAY 189

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F            ++A+ A        M      +L ++  ++ +  R    +
Sbjct: 190 LVPILFMFG--------FGPVSALVATIIYATPPMIRVTILALKSVDPEILDFGRMAGTT 241

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q  W + VP +   L+  +   +      V+ + MI  G       G+G  +  A++ 
Sbjct: 242 PRQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAALRR 294

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295
            D+ A   A + ++ +    D+L       ++ +             SW     ++T  +
Sbjct: 295 LDIGAGFEAGIAIVVLAIAVDRLS----QAFAERMG---QVHHIAPGSWA-TRHKRTVLV 346

Query: 296 RFIGYSSWNFFSPLSNNVKKLCR----------------------TLGVIRFHFPENFLQ 333
             +   +W         ++                              ++  F   F+ 
Sbjct: 347 LSLLIITWGLGRFSPLLLQYPISQTITTGDFWSETVKYLNVNYFDAFEAVKVFFLHWFML 406

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
                 +          +         W+      +  T      +     +T++     
Sbjct: 407 PIKKTLLGIPWPWAVAMLTLVGWRAGGWRLALMCGSMSTLIAFSGLWAKAMVTVYLCGAS 466

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +I+A++I +P+G+           I  F   L   P+ V+   VV           + + 
Sbjct: 467 VILATLIGVPLGVLAALNKRAGVAIGLFIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIV 526

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L  +     Y       G  +   +  E       T W+  R + LP   P  + G    
Sbjct: 527 LYALAPAVRY----AAHGMRSVSGELIEAGLVSGCTRWQLLRMVRLPMALPEILLGINQT 582

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              A +  +++ +            LG  +  +  K      ++  L +    +  +R +
Sbjct: 583 IMLALSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFIAIIADRLV 635


>gi|296127569|ref|YP_003634821.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira
           murdochii DSM 12563]
 gi|296019385|gb|ADG72622.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 275

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 11/232 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIW 401
           ++ + W+ +   +   +           F    V  Y +    IT+ RV    IIA II 
Sbjct: 37  VIMVVWYFLAKKIDNNLLLPDFLLTCKEFFLSWVDPYTVQNLLITLERVFRGFIIACIIG 96

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +G+   I   + P    +   P   + PL +                L+     
Sbjct: 97  LPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFGLGDG----PTIFLITMSAI 152

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + ++ N I G      ++   A S           IILPG  P ++TG   A G  W + 
Sbjct: 153 FPLIINTIDGVRGIDPNYINAARSMGARNIDIMFDIILPGALPSFLTGCRLALGLGWMSV 212

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +E  +       + G G  + E+ ++   P++   +++      +++R L
Sbjct: 213 ICAEFIA------TSKGFGFILVEAQQRLETPKLYALMIVSAIIGFSMDRVL 258



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+    +I+ +       +   S+ + + + PI++ ++ +PI+ ++   +V+F 
Sbjct: 78  LLITLERVFRGFIIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFG 137

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         IF I  S ++ +  +    +  I  +    +RS         + + 
Sbjct: 138 LGDGP--------TIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGARNIDIMFDII 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P  +    +++  GW  V+ +E I          G G  +  A +  +   +   
Sbjct: 190 LPGALPSFLTGCRLALGLGWMSVICAEFIATSK------GFGFILVEAQQRLETPKLYAL 243

Query: 245 MLTMLGVIFLYDQLL 259
           M+    + F  D++L
Sbjct: 244 MIVSAIIGFSMDRVL 258


>gi|218511038|ref|ZP_03508916.1| binding-protein dependent transport system inner membrane protein
           [Rhizobium etli Brasil 5]
          Length = 264

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +              +I     ++ RV     IA+++ I  G+ IG    +   +    +
Sbjct: 48  VDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIGRSRKVGDFLLAPLE 107

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           LL   PA  + PL V       L+    +  +   G  + IL N + G           A
Sbjct: 108 LLRPIPAVAWIPLAVLMFPSSELS----MIFITFTGALFPILLNTVHGVEGVDPRLIAAA 163

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   T       +ILPG  P  VTG     G +W   + +E+ S         G+G Y 
Sbjct: 164 KSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAEMISG------QFGIGYYT 217

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E+    ++PE+++G+ ++    +  +  L
Sbjct: 218 WEAYTLQNYPEIIVGMAVIGVLGIGSSTLL 247



 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 17/241 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ L   Q    P D+       L    L  + S +  R+ +   I+ +       +  
Sbjct: 34  LDLGLVTFQNVPSPVDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIG 93

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR++G  L+  L++++ IP + ++   V+ F          +EL+ IF  FT  ++ + 
Sbjct: 94  RSRKVGDFLLAPLELLRPIPAVAWIPLAVLMF--------PSSELSMIFITFTGALFPIL 145

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   ++S   +     + + +P + P +V  + + M   WF +V +E
Sbjct: 146 LNTVHGVEGVDPRLIAAAKSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVWSN 268
           MI          GIG Y   A   Q+   I+  M  +  +        + +   +I W  
Sbjct: 206 MISG------QFGIGYYTWEAYTLQNYPEIIVGMAVIGVLGIGSSTLLRAVGNALIPWQK 259

Query: 269 K 269
           K
Sbjct: 260 K 260


>gi|150401416|ref|YP_001325182.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus aeolicus Nankai-3]
 gi|150014119|gb|ABR56570.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus aeolicus Nankai-3]
          Length = 254

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 9/232 (3%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + +   W      +    +  S+            + ++    I++ RVV   +IA ++ 
Sbjct: 17  WEIIAIWLNNPIILPRVESVLSVLLAPQQPILGTGINLMDNTIISIKRVVSGFLIAGLVA 76

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI +G+   I        +LL   P   + PL ++       +    +  ++  G  
Sbjct: 77  VPIGISMGYFSTIRDFFDAGIELLRPIPPLAWVPLALAWFGIGETS----MLFIIFIGAF 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N IAG    P    + A +           II+P   P  +TG     G AW   
Sbjct: 133 FPILINTIAGVKGVPTILIDSAQTLGAKQKDILLKIIIPASSPSILTGLRIGAGIAWMCV 192

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +E+           GLG  I  +        VV  ++I+    L L++ L
Sbjct: 193 VAAEMLPGSD-----AGLGYLIMYAYMLSRMDIVVASMIIIGLIGLTLDKVL 239



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 13/212 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +    PI     +L      +  R++S  +I+ L              +       ++++
Sbjct: 41  LAPQQPILGTGINLMDNTIISIKRVVSGFLIAGLVAVPIGISMGYFSTIRDFFDAGIELL 100

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP L ++   + +F           E + +F IF    + +  +    +  +P  L +
Sbjct: 101 RPIPPLAWVPLALAWFGIG--------ETSMLFIIFIGAFFPILINTIAGVKGVPTILID 152

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +++           + +P S P ++  + +     W  VVA+EM+   D      G+G 
Sbjct: 153 SAQTLGAKQKDILLKIIIPASSPSILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGY 207

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            I  A     +  ++ +M+ +  +    D++L
Sbjct: 208 LIMYAYMLSRMDIVVASMIIIGLIGLTLDKVL 239


>gi|315924093|ref|ZP_07920319.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622495|gb|EFV02450.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 576

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 99/240 (41%), Gaps = 18/240 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+    V+ I+ + +         + +   V I L       L +    T   +  A ++
Sbjct: 48  LVFLPPVLVILGLAVAAYFVANRKKGLPIFVLIGLLFVYNQGLWEDMMNTVTLVFMAALL 107

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++       L AK  R  +V+ PILD MQ++P   +L   V +F     G V G   + 
Sbjct: 108 SVVIGIPLGILMAKKDRAQVVIQPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASI 164

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+  +  +         +  IPR+L E S +F  +  QK + + +P +   ++  +  
Sbjct: 165 IFALPPTVRF-----TNLGIREIPRELIEASDAFGSTSSQKLFKIELPLARNTIMAGINQ 219

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + MI         PG+G  +  A++   +     + + ++ +  + D+ 
Sbjct: 220 TIMLALSMVVTASMI-------GAPGLGRGVLSALQRAQVGNGFVSGMALVVLAIIIDRF 272



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 91/280 (32%), Gaps = 24/280 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           + + ++  +   FFS +    K     +       P   + L       ++ +      +
Sbjct: 17  HVVSWMTKAWAGFFSAVQWGGKGAMDAITRFLVFLPPVLVILGLAVAAYFVANRKKGLPI 76

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             +        + ++ N   ++D++        T+  V +  +++ +I IP+GI +  + 
Sbjct: 77  FVLI------GLLFVYNQGLWEDMMN-------TVTLVFMAALLSVVIGIPLGILMAKKD 123

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                IQP    +   PA V+    V+      +       +          +     G 
Sbjct: 124 RAQVVIQPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASIIF----ALPPTVRFTNLGI 179

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E + +F  T  +    I LP      + G       A +  + + +      
Sbjct: 180 REIPRELIEASDAFGSTSSQKLFKIELPLARNTIMAGINQTIMLALSMVVTASMIG---- 235

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  + ++       +  + +    + ++RF
Sbjct: 236 ---APGLGRGVLSALQRAQVGNGFVSGMALVVLAIIIDRF 272


>gi|28869973|ref|NP_792592.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853218|gb|AAO56287.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 282

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   L+I ++ I++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS  +I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 85  LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+   + A F ++         +   ++  I R L EV + +  S ++    + +P +
Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    +  + W + F  +    
Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  + I+LP   P
Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    AW   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|91780784|ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693444|gb|ABE36641.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 273

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 95/273 (34%), Gaps = 14/273 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                L L   +  S    +    +     + IAW    +  +  T 
Sbjct: 3   SRFSSRFYRRIERGIVPVLLLAGWEAFSRSGILPAALLPAPSQVLIAWADWIFATDGNTQ 62

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
               + ++    +  RV     IA+++ + +G+ IG+   + S ++P  Q L   P   +
Sbjct: 63  TYSGHWLFDIAASSGRVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSW 122

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +          N     L+  G+ + +L + I G      D     +    +    
Sbjct: 123 IPLAIIWFGIA----NKPAIFLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQML 178

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+I+ P   P   +G   A G AW  ++ +E+ +        +G+G  + +S     + 
Sbjct: 179 LRHIVFPAALPSIFSGLRIAIGSAWMLTVTAEMVA------VKSGVGYVLWDSYYFLRYD 232

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            V+  ++ +     A +  +         R LR
Sbjct: 233 IVIASMVSIGLLGFASDYVIKR----IAARILR 261



 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 77/196 (39%), Gaps = 14/196 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + ++ R+ +   I+ +           SR +  ++ P L  ++ +P + ++   +++F  
Sbjct: 73  AASSGRVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSWIPLAIIWFGI 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   A   AIF +F    + +  S    +    RDL         S      ++  
Sbjct: 133 --------ANKPAIFLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQMLLRHIVF 184

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + +++   W   V +EM+ V        G+G  +  +        ++ +M
Sbjct: 185 PAALPSIFSGLRIAIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDIVIASM 238

Query: 246 LTMLGVIFLYDQLLFR 261
           +++  + F  D ++ R
Sbjct: 239 VSIGLLGFASDYVIKR 254


>gi|305662628|ref|YP_003858916.1| binding-protein-dependent transport systems inner membrane
           component [Ignisphaera aggregans DSM 17230]
 gi|304377197|gb|ADM27036.1| binding-protein-dependent transport systems inner membrane
           component [Ignisphaera aggregans DSM 17230]
          Length = 224

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      + LR+ SA ++S+    V     A+S+ L ++L PI+D++QSIP+LGF    
Sbjct: 5   ELIVDLLYSLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAV 64

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++ +N++P   IG E+A+I  IFT QVWN+   +Y ++ ++P D   +S  + L+   +
Sbjct: 65  LLFLVNIFPPP-IGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASR 123

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++  +  N ++S +GG FF+ A E+I  G+T   L GIG+ I     + D +
Sbjct: 124 ILKIYIPAALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDYI 183

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            +  A++ +L +       L+ P+   +
Sbjct: 184 DMYIAIMLLLAISIFLYIFLWNPLANIA 211



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 88/210 (41%), Gaps = 3/210 (1%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++ +I     ++ R+    I++  + + +GI +     +   + P   +L + P   FFP
Sbjct: 3   IIELIVDLLYSLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFP 62

Query: 436 LVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V+  +      P    +   +L+  G  W ++  V +   + P+DF  ++  + +    
Sbjct: 63  AVLLFLVNIFPPPIGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTAS 122

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I +P       + ++ +  G        E+ S+G+   R  G+G  I E   KG +
Sbjct: 123 RILKIYIPAALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDY 182

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
            ++ + ++++    + L  FLW+PL     
Sbjct: 183 IDMYIAIMLLLAISIFLYIFLWNPLANIAA 212


>gi|152986057|ref|YP_001346556.1| taurine ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961215|gb|ABR83240.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa PA7]
          Length = 272

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 24/270 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
             P         +R +    +    ++   A    W  + ++       + L  +W    
Sbjct: 13  PVPRKRSLPGDRRRWAAGASVLALALLWWAATHFGWVDVLFLPAPEQLFEALQRLWQEGY 72

Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + 
Sbjct: 73  LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V       L+      LL+       +L    AG         +       + W+  
Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+ILP   P  +TG   A G  W+  + +E+ +         GLG  +  + +  +   
Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLYG 581
           VV+G+L++    LA     R++      +G
Sbjct: 243 VVVGILLIAAVALAFELGLRWVQRRFAAWG 272



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L  
Sbjct: 75  ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  I+ +    +  +    +  + R   +  R    S WQ
Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +    
Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +L +  V   ++   + + R    W
Sbjct: 241 DVVVVGILLIAAVALAFELGLRWVQRRFAAW 271


>gi|13022190|gb|AAK11681.1|AF342826_2 putative ABC transporter permease [Enterobacter cloacae]
          Length = 268

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M RV     +A ++ IP G+ IG    +   + P  QLL   P   + PL +       
Sbjct: 75  SMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVTAWLPLSMIFFGVGP 134

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+  G  + I  N   G  +      E A+     G   +R ++LP   P 
Sbjct: 135 N----AAIFLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGPSMFRQVVLPAAMPS 190

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       AW   +V E+           GLGA I +         V+ G++++   
Sbjct: 191 IFNGLRMGHAIAWFLIVVGEM------TGVPEGLGAAIMDGRMLSRTDVVIAGMVVIGLT 244

Query: 566 VLALNRFL 573
               +R L
Sbjct: 245 GFITDRLL 252



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 87/213 (40%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +  ++  R+  A  +++L       L  K+  +  ++ P L +++ +P+  +L  
Sbjct: 66  GTLYIHWIKSMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVTAWLPL 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F             AAIF +     + +  +    + ++   L E +      G  
Sbjct: 126 SMIFFGVG--------PNAAIFLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGPS 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P +MP +   + M  +  WF +V  EM  V +      G+G+ I         
Sbjct: 178 MFRQVVLPAAMPSIFNGLRMGHAIAWFLIVVGEMTGVPE------GLGAAIMDGRMLSRT 231

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M+ +    F+ D+LL      ++ WS 
Sbjct: 232 DVVIAGMVVIGLTGFITDRLLVTLNNRLLKWSP 264


>gi|188583387|ref|YP_001926832.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346885|gb|ACB82297.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 283

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 97/271 (35%), Gaps = 10/271 (3%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +  S+    +P+     +  R    +                +++ +   +   +  V  
Sbjct: 1   MSASAIETGAPIRAPRGRAVRLPRTLPLGRLALRGLALGLSLLAWHVAARYRLDLGLVTF 60

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                        +       +      ++ RV+   + A ++ + +G+ IG        
Sbjct: 61  RNVPTPAAAAQAAWALLHAPALPTHLGASLARVLSGFLAALVVGVALGLAIGRSRFARDL 120

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  ++L   PA  + PL +        +  + ++ +   G  + IL N + G  +   
Sbjct: 121 LWPPLEVLRPIPAVAWIPLAILMFP----SSEVSMAFITFTGALFPILLNTVHGVESVHP 176

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                A S         R +ILPG  P  VTGA    G AW   + +E+ S  +      
Sbjct: 177 RLVAAARSLGAGDAAILREVILPGATPSIVTGAAIGMGTAWFCLVTAEMISGQY------ 230

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G+G +  ES    ++ ++V+G+L++    + 
Sbjct: 231 GIGYFTWESYTLQNYDDIVVGMLLIGVLGMG 261



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ L   +    P          L   +LP +   +  R+LS  + +L+          
Sbjct: 53  LDLGLVTFRNVPTPAAAAQAAWALLHAPALPTHLGASLARVLSGFLAALVVGVALGLAIG 112

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +L P L++++ IP + ++   ++ F          +E++  F  FT  ++ + 
Sbjct: 113 RSRFARDLLWPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 164

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + ++   L   +RS           + +P + P +V    + M   WF +V +E
Sbjct: 165 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGATPSIVTGAAIGMGTAWFCLVTAE 224

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           MI          GIG +   +   Q+   I+  ML +  +  
Sbjct: 225 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGVLGM 260


>gi|332971534|gb|EGK10484.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Kingella kingae ATCC 23330]
          Length = 266

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V ++ A +I +P+G  +G    +   + P  Q L       + P+VV     
Sbjct: 77  GASLQRVGVGLLAALMIGVPIGFALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGI 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  L+ F   W I+ N ++G       + E+  S   T       I+LP + 
Sbjct: 137 GDA----PIYFLLAFAAVWSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVV 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G  W   +  E+           GLG +I ++ ++ ++ E++  ++++ 
Sbjct: 193 GDILNGLRLAIGIVWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIG 246

Query: 564 CFVLALN 570
               AL+
Sbjct: 247 VIGWALD 253



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 86/229 (37%), Gaps = 14/229 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +I      +     P   +  +   L   +L  +   +  R+   ++ +L+      
Sbjct: 39  IGSLILAHSMPLANMLAPAAAIGSLKKLLLDGNLWAHIGASLQRVGVGLLAALMIGVPIG 98

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
                SR++  V+ P    ++ I  L ++   V+ F           +    F +  + V
Sbjct: 99  FALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGIG--------DAPIYFLLAFAAV 150

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W++  +    + NI     E+ RS   +  +  + + +P  +  ++  + +++   W  +
Sbjct: 151 WSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVVGDILNGLRLAIGIVWVVL 210

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           V  EM+ V +      G+G +I           ++ A++ +  + +  D
Sbjct: 211 VPCEMLGVNE------GLGYFILDTRDRLAYSELMAAIVLIGVIGWALD 253


>gi|238063035|ref|ZP_04607744.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC
           39149]
 gi|237884846|gb|EEP73674.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC
           39149]
          Length = 264

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV +   +A+++ I +G+ +G    + S + P  Q+L       +FP+ +  +  
Sbjct: 71  YISLRRVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFPIWLYIIE- 129

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               P     +++     W  L N  AGA A P D + VA  F      +  ++++P   
Sbjct: 130 ---EPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNAL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G  W   +  E+          +G+G ++  S       +VV  ++++ 
Sbjct: 187 PSIITGLRLSMGIGWMVIVAVEMLQG------NSGIGYFVWNSYNALELDKVVAAIVLIG 240

Query: 564 CFVLALNRFL 573
              L L+  L
Sbjct: 241 VIGLVLDAIL 250



 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 93/250 (37%), Gaps = 22/250 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTL 70
           ++ ++   + + +      G      P D    +   L            +  +   +  
Sbjct: 16  LWAVVGLAVFVALWQFASRGSATVPNPLDSARTLGDLLSRPFFNTTNDKGIGLHLYISLR 75

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+     ++ L       +    R +   L P++ +++ +  L +    +          
Sbjct: 76  RVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFPIWLYI-------- 127

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +     +AI  IF + +W    +       IPRD   V+  F+       W++ +P ++P
Sbjct: 128 IEEPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNALP 187

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + +SM  GW  +VA EM+          GIG ++  +    +L  ++ A++ +  
Sbjct: 188 SIITGLRLSMGIGWMVIVAVEMLQGNS------GIGYFVWNSYNALELDKVVAAIVLIGV 241

Query: 251 VIFLYDQLLF 260
           +  + D +L 
Sbjct: 242 IGLVLDAILL 251


>gi|322508395|gb|ADX03849.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii 1656-2]
 gi|323518017|gb|ADX92398.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
          Length = 251

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 20/244 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------ITMFR 389
           +++    FW  +  G+A            N  T  DV++ +W              ++FR
Sbjct: 2   IAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFR 61

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VVV  ++A++I + +G+  G    +++ + P  ++L   PA  + PL +        +  
Sbjct: 62  VVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSEAS-- 119

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  +   G  + IL N + G  A        A S   +       +I+PG  P  +TG
Sbjct: 120 --MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITG 177

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G  W   + +E+ S         G+G +  ES    ++  +V+G++++    +  
Sbjct: 178 LSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFS 231

Query: 570 NRFL 573
           +  +
Sbjct: 232 STLV 235



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++   L    +N+          P D++  +     + +  ++   +  R++   V+
Sbjct: 9   FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVL 68

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L       LA + ++L   L+P L++++ IP + ++   ++ F          +E + 
Sbjct: 69  AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 120

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF  F   ++ +  +    +  +   L   ++S   S       + +P ++P ++  + +
Sbjct: 121 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 180

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M   WF +V +EMI          GIG +   +   Q+   I+  M+ +  +      L
Sbjct: 181 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 234

Query: 259 L 259
           +
Sbjct: 235 V 235


>gi|260425684|ref|ZP_05779664.1| taurine ABC transporter, permease protein [Citreicella sp. SE45]
 gi|260423624|gb|EEX16874.1| taurine ABC transporter, permease protein [Citreicella sp. SE45]
          Length = 421

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+      ++I IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +L+     W +     +G S         A S   + W+  R++I+P   P 
Sbjct: 290 LGK----IILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQIMRHVIVPNSLPD 345

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++      V++G++++   
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIGVI 399

Query: 566 VLALNRFL 573
              ++  +
Sbjct: 400 GFGIDILM 407



 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+++      L           S        PI++ M+ +P L  +  
Sbjct: 221 STLWEHLGWSLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            EL  I  +F + +W M  +    +  +       + S   S WQ
Sbjct: 281 VIIWAGIG--------ELGKIILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQ 332

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP S+P +     ++M   W  VVA+E++          G G  I +A K Q  
Sbjct: 333 IMRHVIVPNSLPDIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 386

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++  ++ +  + F  D L+    + ++ W  +
Sbjct: 387 DIVIMGIILIGVIGFGIDILMRLAEKALVPWKGR 420


>gi|220914798|ref|YP_002490106.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219952549|gb|ACL62939.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 283

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 12/263 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P   +         + R   P   L        S  L          V   +    +G  
Sbjct: 9   PAVRHAAAWRIWSKLERVVVPVLILAGWEAFSRSGYLPQSLLPPPSAVLHALGDWVLGVD 68

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +   Y      +     + +RV+   +IA +  I +G  IG+       ++P  Q+L  
Sbjct: 69  GSTQDYSGTW--LRHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRP 126

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL +                L+  G  +  L N I G      +     +   
Sbjct: 127 VPPVSWIPLAIIWFGIADK----PAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMG 182

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            TG +   +I++P   P    G   A G AW  ++ +E+ +        +G+G  + +S 
Sbjct: 183 ATGRQLLMHIVVPAALPSIFAGLRIAIGSAWMLTVTAEMVA------VKSGVGYVLWDSY 236

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
               +  V+  ++ +       +
Sbjct: 237 YFLRYDMVIASMVSIGLLGYLSD 259



 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++A  +T R+L+  VI+ L   +  T    SR     L P L +++ +P + ++   ++
Sbjct: 79  LRHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAII 138

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F          A+  AIF +F    +    +    +  I R+L         +G Q   
Sbjct: 139 WFGI--------ADKPAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLM 190

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ VP ++P +   + +++   W   V +EM+ V        G+G  +  +        +
Sbjct: 191 HIVVPAALPSIFAGLRIAIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDMV 244

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + +M+++  + +L D  +
Sbjct: 245 IASMVSIGLLGYLSDFAI 262


>gi|86748598|ref|YP_485094.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86571626|gb|ABD06183.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 306

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 96/288 (33%), Gaps = 23/288 (7%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +    + P +       R        +   +L+L      + ++      +       
Sbjct: 17  AAAFRVGWLPSAATAPTAPRRGAASPGTYIRRWLKLNRGGLRALLIGAVALVLFLFAWHL 76

Query: 359 IAWQSIGYIVNHFTYQDVLYV-------------IWLGCITMFRVVVLIIIASIIWIPVG 405
           +    + + V          V                  ++  R+++   +A++I +P+G
Sbjct: 77  LTANRVVFFVRFTNVPSPAAVYDSLTRAMHDSKFFMHVLLSCRRILIGFSLAALIAVPLG 136

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +G    I   + P +++L   PA  + P+ +             +  +   G+ + IL
Sbjct: 137 MVMGRFKLIHEALFPISEVLRPIPAIAWVPMAIML----WPTNEQSIVFITFLGSFFPIL 192

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N + G           +       +  +R +  P   P+  TG     G AW + I +E
Sbjct: 193 VNTLHGMKLVDPVLVRASQCLGAREFAIFREVYFPASLPHIFTGLTVGMGVAWVSLIAAE 252

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S         G+G +  E+     + ++ LG++ +    L  +  +
Sbjct: 253 MISG------QFGIGYFTWEAYSLVQYADIALGMICIGVLGLGSSMLI 294



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           R +      L+ F+    ++     +          P  + D +   +       +   +
Sbjct: 58  RALLIGAVALVLFLFAWHLLTANRVVFFVRFTNVPSPAAVYDSLTRAMHDSKFFMHVLLS 117

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L    ++ L       +  + + +   L PI ++++ IP + ++   ++ +     
Sbjct: 118 CRRILIGFSLAALIAVPLGMVMGRFKLIHEALFPISEVLRPIPAIAWVPMAIMLW----- 172

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + +F  F    + +  +    +  +   L   S+      +  F  +  P S
Sbjct: 173 ---PTNEQSIVFITFLGSFFPILVNTLHGMKLVDPVLVRASQCLGAREFAIFREVYFPAS 229

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + + M   W  ++A+EMI          GIG +   A        I   M+ +
Sbjct: 230 LPHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYADIALGMICI 283

Query: 249 LGVIF---LYDQLLFRPMIVWS 267
             +     +  + L R ++ WS
Sbjct: 284 GVLGLGSSMLIRGLGRLVMPWS 305


>gi|50122424|ref|YP_051591.1| glycine betaine transporter membrane protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612950|emb|CAG76401.1| glycine betaine/L-proline transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 393

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +++   +  ++  I +        A  T   +L+A+   +
Sbjct: 139 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 198

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 199 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 255

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 256 A-----LPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 310

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 311 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 361



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +           P           
Sbjct: 101 PLDSWV------THGIDWVVLHFRPIFQGIRVPVDFILGGFQQFLLGMPAPI-------- 146

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    IT+  V+  +    +
Sbjct: 147 ---AILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 199

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 200 IGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 255

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 256 ALPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 315

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 316 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 361


>gi|330967519|gb|EGH67779.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 285

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYI 367
            +  L       R        +  S   +  +L ++W     G    +        +G  
Sbjct: 14  GIANLADKPPAARRPQVYPSTRTISALTLVTLLALWWAVTAGGWIEPLFLPPPADVLGKG 73

Query: 368 VNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               T   +   +W     ++ R+ + +  A++  IPVGI IG          P  +   
Sbjct: 74  WQLMTKGYMDSTLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYR 133

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   + PL+V        +      LL+       I      G           A S 
Sbjct: 134 PIPPLAYLPLIVIWFGIGEFSK----VLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSL 189

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  +  +
Sbjct: 190 GATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSA 243

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +      VVLG+L++     A+    R L   L  +
Sbjct: 244 AQFLVTDVVVLGILVIAIIAFAMELGLRALQRKLVPW 280



 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    V  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|322832872|ref|YP_004212899.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168073|gb|ADW73772.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 293

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 19/264 (7%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382
            P   +       + +   + +F V   V                  Q+ + +       
Sbjct: 38  VPLRPVASRRRWFLGFCFFVLFFAVWALVTFTGLVSPTFLASPASMLQEGILLFTDFDFT 97

Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+ RV+   I+A  I +P+GI +G    I +  +PF       PA+ F PL++  
Sbjct: 98  TDIGMTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILW 157

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                +       L++  G+ + I   V     A   D  E A +   T     R +I+P
Sbjct: 158 AGIGEMQK----VLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVIIP 213

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P          G AW   IV+E+         ++G+G  I  S    +  +++ G++
Sbjct: 214 GAAPEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGII 267

Query: 561 IMCCFVLALNRFLW---HPLYLYG 581
           ++ C  L  +         L+++ 
Sbjct: 268 VIGCIGLLSDLLFKAANRRLFVWS 291



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 92/266 (34%), Gaps = 18/266 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           + P    RR F      + F  V  ++    L        P  ++    +          
Sbjct: 40  LRPVASRRRWFLGFCFFVLFFAVWALVTFTGLVSPTFLASPASMLQEGILLFTDFDFTTD 99

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T +R+L   +++         L    + +     P +   + +P   F+   +++  
Sbjct: 100 IGMTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAG 159

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E+  +  IF    + +T  +  ++    RDL E + +   +       + 
Sbjct: 160 IG--------EMQKVLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVI 211

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   +++ 
Sbjct: 212 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVNSQALLNTGQMIFG 265

Query: 245 MLTMLGVIFLYDQLLF---RPMIVWS 267
           ++ +  +  L D L     R + VWS
Sbjct: 266 IIVIGCIGLLSDLLFKAANRRLFVWS 291


>gi|73668564|ref|YP_304579.1| sulfonate ABC transporter permease [Methanosarcina barkeri str.
           Fusaro]
 gi|72395726|gb|AAZ69999.1| sulfonate ABC transporter, permease protein [Methanosarcina barkeri
           str. Fusaro]
          Length = 261

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++    + I  A +I IP+GI +G+   I+  I P  ++L   P   + P  +
Sbjct: 59  IFTDTLTSLINFSIGIAGAFVIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAI 118

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYI 497
                 H         ++  G  + I+ N   G    P  + E A     T      RYI
Sbjct: 119 IWFGLTH----QAAGFVVFAGMVFPIIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYI 174

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  V G   A G  W   + +E+          +GLG  I  +        V++
Sbjct: 175 AIPSAMPSIVAGIRIAMGVGWMCLVAAEMFG------SDSGLGYEIWHNYYMHRMDFVLV 228

Query: 558 GVLIMCCFVLALNRFLWH 575
            +L++    L ++RF   
Sbjct: 229 YMLLLGFVGLLIDRFFRR 246



 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 94/246 (38%), Gaps = 16/246 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+  + +  +   +++    +     D++      +    +      + +     +  + 
Sbjct: 19  LIVAIAIWQLAADVIVQNKFKLPSFYDVIISFSAIVKSGLIFTDTLTSLINFSIGIAGAF 78

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +   + PI++I++ IP + ++ F +++F             AA F
Sbjct: 79  VIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAIIWFGL--------THQAAGF 130

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMS 199
            +F   V+ +  + Y    N+P+   E +R    +       Y+ +P +MP +V  + ++
Sbjct: 131 VVFAGMVFPIIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIA 190

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           M  GW  +VA+EM           G+G  I        +  +L  ML +  V  L D+  
Sbjct: 191 MGVGWMCLVAAEMFGSDS------GLGYEIWHNYYMHRMDFVLVYMLLLGFVGLLIDRFF 244

Query: 260 FRPMIV 265
            R +  
Sbjct: 245 RRYVDA 250


>gi|296120166|ref|ZP_06838719.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295966858|gb|EFG80130.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 260

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++  ++A++I +PVG  +G    +   + P  Q+L       + PL +
Sbjct: 66  IFWHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVSPLAWLPLGL 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       +++    W IL N I    +    +  +A +     W    YI 
Sbjct: 126 ALLK----DAENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIYIW 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   +   AW   + +E+   G       G+G ++  +  +     +V+ 
Sbjct: 182 LPASLPGIITGLRLSLSTAWLVIVAAEMLIGG------RGVGFFVWNAWNRLDIDAIVVA 235

Query: 559 VLIMCCFVLALNRFL 573
           + I+    L L+  +
Sbjct: 236 IFIIGIAGLVLDHLV 250



 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 90/197 (45%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+L   +++ +       +  +S  L   + P++ I++ +  L +L   +  
Sbjct: 68  WHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVSPLAWLPLGLAL 127

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +        AE  A+F I  S +W +  +   ++ ++      ++ +   + W +  Y
Sbjct: 128 LKD--------AENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIY 179

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+PG++  + +S+S  W  +VA+EM++ G       G+G ++  A    D+ AI+
Sbjct: 180 IWLPASLPGIITGLRLSLSTAWLVIVAAEMLIGG------RGVGFFVWNAWNRLDIDAIV 233

Query: 243 YAMLTMLGVIFLYDQLL 259
            A+  +     + D L+
Sbjct: 234 VAIFIIGIAGLVLDHLV 250


>gi|260654834|ref|ZP_05860322.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1]
 gi|260630549|gb|EEX48743.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1]
          Length = 256

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+    IT+ RV      A +I +PVG+ +G+       + P+   +   P   + PL
Sbjct: 51  GKVMSNLYITLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +                ++     + IL N I+G      ++K  A       W+  R 
Sbjct: 111 SIIWFGLGDG----PTIFMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRD 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P ++TG   A G AW + I +E  +       +TG G  + E+  +   P + 
Sbjct: 167 VVLPGALPNFLTGCRLALGSAWMSVICAEFIA------TSTGFGYIMVEAQVRMQTPLLY 220

Query: 557 LGVLIMCCFVLALN 570
             +++      A++
Sbjct: 221 ALMIMSALVGFAID 234



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 17/205 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+ +    +++       L   SR   + L P ++ ++ +PI+ ++  ++++F    
Sbjct: 60  TLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGD 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      IF I  S V+ +  +    + NI  + +  +R      WQ    + +P 
Sbjct: 120 GP--------TIFMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPG 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +    +++   W  V+ +E I          G G  +  A        +   M+ 
Sbjct: 172 ALPNFLTGCRLALGSAWMSVICAEFIATST------GFGYIMVEAQVRMQTPLLYALMIM 225

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269
              V F  DQ   LL R +  W  K
Sbjct: 226 SALVGFAIDQSIVLLERCLTGWRYK 250


>gi|209885998|ref|YP_002289855.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209874194|gb|ACI93990.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 283

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 11/200 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV+V +  A +I +P+G+ +G    ++    P  Q L       + P+ V     
Sbjct: 91  MVSLRRVLVGLGFALLIGVPLGLAVGSYARLNIATSPAFQFLRMISPLSWMPIAVMVFGV 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  ++ F   W IL N   G       +  +A S   T W    ++ILPG+ 
Sbjct: 151 GDN----PIYFMLAFAAVWPILLNTAEGVRRLQPSWLSLADSLAATRWETLWHVILPGVL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG   A G  W   +  E+         + GLG +I ++ ++ ++ E++  VL++ 
Sbjct: 207 GHVLTGLRLAIGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMIG 260

Query: 564 CFVLALNRFLWHPLYLYGTR 583
                L+      LY   TR
Sbjct: 261 ILGFMLDAGA-RALYQAATR 279



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 14/220 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G      P   +  +   L    LP +   +  R+L  +  +LL             RL
Sbjct: 62  EGFIRQFSPTTAIPKLAAMLAGPDLPVHIMVSLRRVLVGLGFALLIGVPLGLAVGSYARL 121

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
            +   P    ++ I  L ++   V+ F           +    F +  + VW +  +  +
Sbjct: 122 NIATSPAFQFLRMISPLSWMPIAVMVFGVG--------DNPIYFMLAFAAVWPILLNTAE 173

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  +      ++ S   + W+  W++ +P  +  ++  + +++   W  +V  EM+ V 
Sbjct: 174 GVRRLQPSWLSLADSLAATRWETLWHVILPGVLGHVLTGLRLAIGIVWIVLVPCEMLGVS 233

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                  G+G +I           ++  +L +  + F+ D
Sbjct: 234 A------GLGYFILDTRDRLAYSELMATVLMIGILGFMLD 267


>gi|227329900|ref|ZP_03833924.1| glycine betaine transporter membrane protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 415

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +++   +  ++  I +        A  T   +L+A+   +
Sbjct: 161 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 220

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 221 LIGLPVGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 277

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 278 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 332

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 333 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 383



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 97/303 (32%), Gaps = 21/303 (6%)

Query: 272 LERTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
           L       P    +L  F+ T      ++ +             + +   +  I   F +
Sbjct: 100 LNSAAPATPEHFNLLDPFKDTLIPLDSWVTHGIDWVVLHFRPIFQGVRVPVDFILGGFQQ 159

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             L + +   +     I W     G+ +      I            +       IT+  
Sbjct: 160 FLLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAI--------GAIGAWSQAMITLAL 211

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  +    +I +PVGIW+      +  I+P    +   PA V+   +V          N
Sbjct: 212 VLTALFFCVLIGLPVGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----N 267

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   ++ I      I+   I G    P D  E A SF  +  +    + LP   P  + G
Sbjct: 268 VPGVVVTIIFALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAG 327

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A +  +++ + + G       GLG  +     +       +G + +    + L
Sbjct: 328 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIIL 380

Query: 570 NRF 572
           +R 
Sbjct: 381 DRL 383


>gi|209884786|ref|YP_002288643.1| taurine transport system permease protein TauC [Oligotropha
           carboxidovorans OM5]
 gi|209872982|gb|ACI92778.1| taurine transport system permease protein TauC [Oligotropha
           carboxidovorans OM5]
          Length = 286

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      + +RV +   +  ++ +P+G+ IG+         P  ++L   P   + PL
Sbjct: 83  GDLFLAIGWSCYRVFMGFGLGMLLAVPLGVAIGWSRVCEDLFNPIVEILRPIPPLAWIPL 142

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +     +    +  +   G+ + IL   IAG         E A +   +  +    
Sbjct: 143 SIIWLGVGFKS----VLFITTLGSFFPILVATIAGVRNVDRRMIEFARTLGASTGQILLK 198

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P    G   A G +W   + +E+ S         GLG  I ++        V+
Sbjct: 199 VVIPAAMPQTFVGMRIAVGFSWMVVVAAEMIS------VKYGLGWLIWKARFSFDTATVM 252

Query: 557 LGVLIMCCFVLALNRFL 573
            G+ I+    + + + +
Sbjct: 253 AGMAIIGLLSVLMTKAM 269



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 14/213 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D++  V +      L      +  R+     + +L           SR    +  PI++I
Sbjct: 71  DVLKSVWVNAVEGDLFLAIGWSCYRVFMGFGLGMLLAVPLGVAIGWSRVCEDLFNPIVEI 130

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP L ++  ++++    +         + +F       + +  +    + N+ R + 
Sbjct: 131 LRPIPPLAWIPLSIIWLGVGF--------KSVLFITTLGSFFPILVATIAGVRNVDRRMI 182

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R+   S  Q    + +P +MP     M +++   W  VVA+EMI V        G+G
Sbjct: 183 EFARTLGASTGQILLKVVIPAAMPQTFVGMRIAVGFSWMVVVAAEMISVK------YGLG 236

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             I  A    D   ++  M  +  +  L  + +
Sbjct: 237 WLIWKARFSFDTATVMAGMAIIGLLSVLMTKAM 269


>gi|289193148|ref|YP_003459089.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
 gi|288939598|gb|ADC70353.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
          Length = 269

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 23/254 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLI 394
           +   + + W  +   +   +    +  +VN  T+          +I    +++ RV+   
Sbjct: 25  LPIAVVVAWEILAIYINNPVILPRVEAVVNVLTHPFEGILGTGSLIDNTIVSIKRVLGGF 84

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++AS + IP+GI +G+   I+S      +LL   P   + PL ++      ++    + +
Sbjct: 85  LLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAWVPLSLAWFGLGEMSMIFIIFI 144

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              F     IL N I+G  + P    E A +    G      +++P   P  +TG     
Sbjct: 145 GAFFP----ILINTISGVKSVPTPLIEAALTLGAKGRDILIKVVIPASSPSILTGLRVGA 200

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571
           G AW   + +E+           GLG  I  +        V+  ++I+    L L+R   
Sbjct: 201 GIAWMCVVAAEMLPS-----SNAGLGYLIMYAYSLSRMDVVIACMIIIGLIGLVLDRGLR 255

Query: 572 ------FLWHPLYL 579
                 F+W  +  
Sbjct: 256 YIEDKYFVWRKMMK 269



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL      +  R+L   +++         L    R +  +   ++++++ IP L +
Sbjct: 64  LGTGSLIDNTIVSIKRVLGGFLLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAW 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  ++ +F           E++ IF IF    + +  +    + ++P  L E + +    
Sbjct: 124 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAK 175

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G      + +P S P ++  + +     W  VVA+EM+   +      G+G  I  A   
Sbjct: 176 GRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++  M+ +  +  + D+ L
Sbjct: 231 SRMDVVIACMIIIGLIGLVLDRGL 254


>gi|295706799|ref|YP_003599874.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus
           megaterium DSM 319]
 gi|294804458|gb|ADF41524.1| aliphatic sulfonates ABC transporter, permease protein SsuC
           [Bacillus megaterium DSM 319]
          Length = 284

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 94/236 (39%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI+      +    L      + LR      +      ++  +   S+R    + 
Sbjct: 63  LPTPGDIILSFKQLIVSGELGANLQISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMD 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      +++F           E++ I  I     + +  + Y  +  +
Sbjct: 123 PSIQMLRTVPHLALAPLFILWFG--------FGEISKILLIANGAFFPIYVNTYLGIRGV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R  + S W++   L +P ++P ++  + +S+   W  +V +E++   +    
Sbjct: 175 DSKLFDVARVLQFSKWKQITKLILPAALPNILLGVRLSLGIAWLGLVVAELMGASE---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             G+G  I  A +      +   ++    V  L D   ++L + ++ W + +  E+
Sbjct: 231 --GVGYMIMDARQFSQTDVVFVGIIIFAVVGKLTDSFVRVLEKRLLKWRDSYAGEK 284



 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R  +   + + + +  G+ +GF       + P  Q+L   P     PL +    + 
Sbjct: 88  ISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      LL+  G  + I  N   G     +   +VA     + W+    +ILP   P
Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW   +V+E+         + G+G  I ++ +      V +G++I   
Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257

Query: 565 FVLALNRFL 573
                + F+
Sbjct: 258 VGKLTDSFV 266


>gi|218531602|ref|YP_002422418.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|240140097|ref|YP_002964574.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens AM1]
 gi|218523905|gb|ACK84490.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
 gi|240010071|gb|ACS41297.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens AM1]
          Length = 287

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+   + A  + + +G+ IG        + P  ++L   PA  + PL +     
Sbjct: 91  GASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFP- 149

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + ++ +   G  + IL N + G  +        A S         R +ILPG  
Sbjct: 150 ---SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAA 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++ 
Sbjct: 207 PSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLIG 260

Query: 564 CFVLA 568
              + 
Sbjct: 261 LLGMG 265



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 14/215 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +    P          +   +LP +   +  R+LS  + +L           +SR    
Sbjct: 64  FRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARD 123

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L+P L++++ IP + ++   ++ F          +E++  F  FT  ++ +  +    +
Sbjct: 124 LLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPILLNTVHGV 175

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++   L   +RS           + +P + P +V    + M   WF +V +EMI     
Sbjct: 176 ESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMISG--- 232

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                GIG +   +   Q+   I+  ML +  +  
Sbjct: 233 ---QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 264


>gi|107028845|ref|YP_625940.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116689996|ref|YP_835619.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105898009|gb|ABF80967.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116648085|gb|ABK08726.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 291

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 28/285 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366
           ++  +  + R L               + +R + M    W    +   +A+  A      
Sbjct: 1   MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60

Query: 367 IVNHFTYQDVL----------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
            +   T+ +V                  +      ++ RV+   + A++  I +G+ IG 
Sbjct: 61  SLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIGR 120

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P  ++L   PA  + PL +       L+    +  +   G  + IL N + 
Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA A        A S    G   +  +ILPG  P   TG     G AW   + +E+ +  
Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +      G+G +  ES    ++P++V+G+ ++    +  +  +  
Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+  V + +          
Sbjct: 60  LSLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|242280135|ref|YP_002992264.1| ABC transporter transmembrane protein [Desulfovibrio salexigens DSM
           2638]
 gi|242123029|gb|ACS80725.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 278

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  +     +++ RV++   +A+ + IP+G+ +G+   +      F  L    P   + P
Sbjct: 55  MGSLAGNVLVSLVRVIMGYTLAAAVAIPLGVVMGYYGVVFKFFNGFLNLFRPIPPLAWVP 114

Query: 436 LVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           LV++      L                N    +  ++  G  + IL + I G        
Sbjct: 115 LVMAWFGISSLATLSGVETGQLYIYLDNIKFSMLFIIFIGAFYPILTSTIHGVRNVNKTL 174

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A        + +R +++P   P  +TG     G AW   + +E+          +G+
Sbjct: 175 IDSARVLGANERQIFRKVLIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGI 229

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G  I  +    S   V+ G++ +     A++    H
Sbjct: 230 GYMITHAFTLASTDIVIAGMISIGAVGAAMDAVFRH 265



 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 17/221 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           + +     + + SL      + +R++    ++         +      +       L++ 
Sbjct: 45  VFNPTEDLISMGSLAGNVLVSLVRVIMGYTLAAAVAIPLGVVMGYYGVVFKFFNGFLNLF 104

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAI------------FAIFTSQVWNMTFSMY 155
           + IP L ++   + +F       + G E   +            F IF    + +  S  
Sbjct: 105 RPIPPLAWVPLVMAWFGISSLATLSGVETGQLYIYLDNIKFSMLFIIFIGAFYPILTSTI 164

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + N+ + L + +R    +  Q F  + +P +MP ++  M + +   W  +V++EM+  
Sbjct: 165 HGVRNVNKTLIDSARVLGANERQIFRKVLIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG 224

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                 L GIG  I  A        ++  M+++  V    D
Sbjct: 225 -----SLSGIGYMITHAFTLASTDIVIAGMISIGAVGAAMD 260


>gi|241896021|ref|ZP_04783317.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241870752|gb|EER74503.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 575

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 96/236 (40%), Gaps = 16/236 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++   I  +L   ++  VP     I  I ++   L      T   ++ + +IS++ 
Sbjct: 55  VWLFIIGITIFAILMFGKKWGVPFFTF-IGLIIVENQGLWSDLMSTFTLVIISSLISVII 113

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA 
Sbjct: 114 GVPLGIWMAKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFG---IGVVPGVFASVIFA- 169

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  +P DL E + SF  +G QK + + +P +   +   +  ++  
Sbjct: 170 ----LPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTLML 225

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++  D+        +++ +  + D+ 
Sbjct: 226 ALSMVVIASMI-------GAPGLGRGVLSAVQNADIGKGFVNGFSLVVLAIIIDRF 274



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 11/238 (4%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
            +   +   L I    +   +  G  W    +        +   +      T   V++  
Sbjct: 48  GALSAIPVWLFIIGITIFAILMFGKKWGVPFFTFIGLIIVENQGLWSDLMSTFTLVIISS 107

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+ II +P+GIW+     ++  IQP    +   PA V+    V+      +       +
Sbjct: 108 LISVIIGVPLGIWMAKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFGIGVVPGVFASVI 167

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +     G    P D  E A SF  TG +    + LP       +G     
Sbjct: 168 F----ALPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTL 223

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  +++ +           GLG  +  + +     +  +    +    + ++RF
Sbjct: 224 MLALSMVVIASMIG-------APGLGRGVLSAVQNADIGKGFVNGFSLVVLAIIIDRF 274


>gi|291616929|ref|YP_003519671.1| SsuD [Pantoea ananatis LMG 20103]
 gi|291151959|gb|ADD76543.1| SsuD [Pantoea ananatis LMG 20103]
          Length = 649

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV           L Q+ + ++ R L    I      V   +   SR    +L 
Sbjct: 425 LPAPEKIVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLD 484

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A IF +    ++ +  + Y  + N+
Sbjct: 485 TSLQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNV 536

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 537 DRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETISANA---- 592

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277
             GIG     A +      ++ A++    +  L D    LL R  + W   ++ +  T 
Sbjct: 593 --GIGYLAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEKTA 649



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 20/227 (8%)

Query: 367 IVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           IV  F    V   +W    I+ +R ++   I   + + +G+  G        +    Q+L
Sbjct: 431 IVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLDTSLQML 490

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PLV+                L+  GT + I  N   G         E+A S
Sbjct: 491 RNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYLNTYHGIRNVDRGLVEMARS 546

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           + ++GW  +  +ILPG  P  + G   A G  W   IV+E  S         G+G     
Sbjct: 547 YGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMN 600

Query: 546 STEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGTR 583
           + E      V++ +++            L L R    WHP Y    +
Sbjct: 601 AREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEK 647


>gi|170742628|ref|YP_001771283.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196902|gb|ACA18849.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 277

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 13/254 (5%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            +P ++   +L    G +         +L S   +   + +     V    +     ++ 
Sbjct: 1   MTPRTSFATRLSALRGALLPIGLLILWELASRAGLFSAVVLPPPSAVAARWVQSLVPALP 60

Query: 366 YIVNHFTYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           Y     +Y + L    +      ++ RVV    I   + +PVG+ +G    +   + P  
Sbjct: 61  YDPQSQSYGEWLLSGELPHDAVASLGRVVAGFAIGVGLALPVGLLMGTSDRLYGLVNPLL 120

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q+L   P   + PL +          N     L+  GT + +L N IAG     + +   
Sbjct: 121 QILRPIPPIAYIPLAIVWFGLG----NPPALFLIALGTFFPVLVNTIAGVRQVDSIYIRA 176

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +     W  +R +ILP   P+ + G     G A+   IV+E+ +       + GLG  
Sbjct: 177 ARNLGAGPWTLFRRVILPAASPFVLAGMRIGIGTAFIVVIVAEMIA------VSDGLGYR 230

Query: 543 IAESTEKGSFPEVV 556
           I E+ E     +++
Sbjct: 231 ILEAREYMWSDKII 244



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 18/240 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+   + +     ++ VP    D    +    L    LP  A  +  R+++   I + 
Sbjct: 38  AVVLPPPSAVAARWVQSLVPALPYDPQSQSYGEWLLSGELPHDAVASLGRVVAGFAIGVG 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   S RL  ++ P+L I++ IP + ++   +V+F    P         A+F 
Sbjct: 98  LALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFGLGNPP--------ALFL 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    +  +       +R+     W  F  + +P + P ++  M + + 
Sbjct: 150 IALGTFFPVLVNTIAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPFVLAGMRIGIG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  V+ +EMI V D      G+G  I  A +      I+  MLT+  +  L D  + R
Sbjct: 210 TAFIVVIVAEMIAVSD------GLGYRILEAREYMWSDKIIGGMLTIGLLGLLIDAAMSR 263


>gi|218779229|ref|YP_002430547.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
 gi|218760613|gb|ACL03079.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
          Length = 276

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 24/262 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD-----VLYVIWLG 383
           +   +      +   L + W      +        +  +     +          ++   
Sbjct: 5   KRIGRQAGRFVLPLALAVLWQAAAIWLDKQTVLPRLDAVAAVLFHPTEKILITGSLLENM 64

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++  ++A +  +P+G+ +G+   ++  +    ++L   P   + PL+++ +  
Sbjct: 65  AISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPLILAWLGI 124

Query: 444 YHLNPNLW--------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
             +                     +++  G  + IL N I G  + P ++ E A +    
Sbjct: 125 RGVPDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGAK 184

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G      I++P   P  VTG     G  W   + +E+         ++GLG  I  + E 
Sbjct: 185 GLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEMMPG-----SSSGLGYLIWYAYEL 239

Query: 550 GSFPEVVLGVLIMCCFVLALNR 571
                +V G++ +      ++R
Sbjct: 240 LRADIIVAGMVAIGAIGFIMDR 261



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 90/209 (43%), Gaps = 15/209 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +  + + LR++   ++++L            +R+  ++   +++++ IP L ++  
Sbjct: 58  GSLLENMAISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPL 117

Query: 119 TVVYFMNLYPGKVI----------GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + +        +           G + + +  IF    + +  +  Q + +IPR+  E 
Sbjct: 118 ILAWLGIRGVPDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIES 177

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +R+    G      + +P S+P +V  + + +  GW  +VA+EM+    +     G+G  
Sbjct: 178 ARTLGAKGLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEMMPGSSS-----GLGYL 232

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           I  A +      I+  M+ +  + F+ D+
Sbjct: 233 IWYAYELLRADIIVAGMVAIGAIGFIMDR 261


>gi|317486680|ref|ZP_07945497.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922063|gb|EFV43332.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 289

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++RV    ++A+++ +P G+++G+         P  + L   P   + PL +     
Sbjct: 93  GISVWRVFQAFMLATLLGVPTGLFMGWNKTFKDYSFPLLETLRPIPMLAWVPLAILMWPG 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  L   G+ +  + N + G  +    +   A S        +  +ILPG  
Sbjct: 153 REAS----IVFLTFLGSYFATVLNTLLGVESIDESYFRAARSLGARPRDVFFKVILPGAM 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG   + G AW + +  E+ +  +      GLG  I  S     +P +++ ++ + 
Sbjct: 209 PFIFTGLQISMGYAWFSLVAGEMLAGEY------GLGYLIWNSFMLVQYPVIIIAMITLG 262

Query: 564 CFV---LALNRFLWHPLYLY 580
                   L R + + L  +
Sbjct: 263 VIGSLSSLLIRMIGNRLMQW 282



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 82/209 (39%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+  A +++ L           ++       P+L+ ++ IP+L ++   ++ +
Sbjct: 91  HIGISVWRVFQAFMLATLLGVPTGLFMGWNKTFKDYSFPLLETLRPIPMLAWVPLAILMW 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    G E + +F  F    +    +    + +I       +RS        F+ +
Sbjct: 151 --------PGREASIVFLTFLGSYFATVLNTLLGVESIDESYFRAARSLGARPRDVFFKV 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +   + +SM   WF +VA EM+          G+G  I  +        I+ 
Sbjct: 203 ILPGAMPFIFTGLQISMGYAWFSLVAGEMLAG------EYGLGYLIWNSFMLVQYPVIII 256

Query: 244 AMLTMLGVI---FLYDQLLFRPMIVWSNK 269
           AM+T+  +     L  +++   ++ W  +
Sbjct: 257 AMITLGVIGSLSSLLIRMIGNRLMQWKVR 285


>gi|302331920|gb|ADL22113.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 253

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +    + Q+ + +  R ++  V++LL       L  ++R L   + 
Sbjct: 37  LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++ I  + +  F V++F            L AI  IF +  + + F+  + + +I
Sbjct: 97  PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +++ +  L+GW  +  +  P +   ++  + M++   W F+V+ EMI        
Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    +L  +L A+  +    F+ D+ +
Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240


>gi|70733713|ref|YP_257353.1| aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348012|gb|AAY95618.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 531

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 73/565 (12%), Positives = 178/565 (31%), Gaps = 74/565 (13%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P IS+R+ P +  +  F L   + +      ++      +V    + L    L  + + +
Sbjct: 22  PLISQRLLPWLLPISLFAL-WWLASRNQWMSEQILPAPALVWSSALELAHGELWSHLAIS 80

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+   ++  +    +       SRRL  ++ P    +  IP L ++   +V+F     
Sbjct: 81  LQRLFWGLLAGIAAGALLGGALGFSRRLERLVFPTFGALSQIPTLAWIPLFMVFFGIG-- 138

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E+  +  +  + V  +T      + +    L E +   RL        L +P +
Sbjct: 139 ------EVLKLVVLIKAVVVPVTLHTLVGVRDAQPRLREAAAVLRLPPALLVRRLVLPAA 192

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P  +  + ++++ GW  ++A E++   +      GIG  +  A +   L  +   +L +
Sbjct: 193 LPAFMAGVRLALATGWTSLLAVELLASSE------GIGYLMVWARQLFMLDIVFVCILVI 246

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
             +    D+ +    R ++ W +    E               FR+    +         
Sbjct: 247 GLLGVCMDRGIGWLDRRLVHWPHPATAE---------------FRRGPRYQGWQRLQPWL 291

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
                  + ++      +  +   + L + +      +       +   +   +    +G
Sbjct: 292 LPLALLALWQVASDQQWVDPNILPSPLAVLATTGNGLLDGSLLGGMGLSLGRTLGGLLLG 351

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
             +       +    +   +    +  +  IA   W+P+                     
Sbjct: 352 GGLGFAFGLLLGLSRFSERLLGPTLAAIRQIAIFAWVPL--------------------- 390

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                      + +      L   +     +     + +        +       E A  
Sbjct: 391 -----------LTAWFGLGELAKWV----FVALAAFFPLFIATQRSVAQLSPQLAEAAQV 435

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +  W+  R ++LPG  P    G   +   AW  +I +E            G+G+ +  
Sbjct: 436 LRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEYFM-----PSNGGIGSQMIS 490

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN 570
           + +      ++ G+L++      LN
Sbjct: 491 AQQLLRMDLIMAGMLLVGLTGALLN 515



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +L P L  ++ I I  ++     +F      K +   LAA F +F         
Sbjct: 365 SRFSERLLGPTLAAIRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLF--------I 416

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  +S+  +   L E ++  RL+ WQ+   L +P + PG+   + +S+   W   + +E 
Sbjct: 417 ATQRSVAQLSPQLAEAAQVLRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEY 476

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            +  +      GIGS +  A +   +  I+  ML +     L + L+ + + + + ++R
Sbjct: 477 FMPSN-----GGIGSQMISAQQLLRMDLIMAGMLLVGLTGALLN-LIGQQLELRATRWR 529


>gi|332283820|ref|YP_004415731.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330427773|gb|AEC19107.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 693

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 86/593 (14%), Positives = 185/593 (31%), Gaps = 61/593 (10%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
              ++     S+ I P  +     + V+G+  +L H +        +     + L V  +
Sbjct: 126 LTESLFFDGFSKDIPPLPW-----ITVVGLAALLGHWLGGWRTAL-LGAASFVYLAVFGV 179

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q + +T   +L  + +  L   +   L  +S     V+ P+ D++QS+P   +L   VV
Sbjct: 180 WQASMQTFSLVLITVPLVFLLGLIAGILMNRSPHFKSVITPLFDVLQSMPPFAYLVPIVV 239

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +       +I   L A+  +           +   L  + + + E  +    + WQ  W
Sbjct: 240 LYGVGNVPAMIATALFAVPPVARC--------IALGLGGVSKGVIEAGQMMGCTRWQLLW 291

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   L+  +   +      +V + +I          G+GS +  +++   L   
Sbjct: 292 RVQMPAARSALLVGLNQGVMQTLAMIVLAALIGAA-------GLGSELLTSLQSLRLGEA 344

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
           L   + ++ +  + D+         S  + L++   + P  SW       +  + F+  S
Sbjct: 345 LEQGIAIVVIAVVLDRF--------SRAYALKKPVYVDPGLSWWRRHPYLSLAIAFLLAS 396

Query: 302 SWNFFSP-----------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
                                    +  +  +   L      F    L        ++  
Sbjct: 397 VSIASLLPELVLLTDKYGFTTAPYWNAGIDWINLNLYESVQAFRNFTLMEILIPTRNFFQ 456

Query: 345 DIFWFCVVCGVAI----GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            I W   V  VA+       W           +     +      T++ +    ++    
Sbjct: 457 AIPWVTFVAVVALLGYRLGGWTVALIAGLLVLFPAATGLWHQAMTTLYMIGTAAVVCIST 516

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
              +G+        S            FP+ ++   VV       L+  + + L  +   
Sbjct: 517 GFFIGLLASRTAAWSRFASGVCDFFQTFPSFIYLIPVVMLFKVSDLSAIIAVLLFAVVPM 576

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             Y     I G    P    E A+    T  +    + LP   P  + G       A   
Sbjct: 577 IRY----TILGLRGVPTPIIEAATQQGTTRLQRLLKVELPIALPEIMLGVNQVIFMALFM 632

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++ +            LGA I  +       + ++  L +    +A +R +
Sbjct: 633 VAITALIGTQD-------LGAEINSARSGNEIGKALVAGLCIAFMGMAADRLI 678


>gi|332978589|gb|EGK15295.1| glycine/betaine ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Psychrobacter sp. 1501(2011)]
          Length = 662

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV+G+I +L                    +    L     +T   ++ +++++++     
Sbjct: 417 LVLGLIALLGWFATRKIWFAVACGAGLFLIGAFGLWPALVQTMALLIVSVLVTMVIGIPI 476

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A S  L  V+ P+LD+MQ++P   +L   ++ F           ++ A+FA     
Sbjct: 477 GILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG--------KVPALFATVIYA 528

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +P ++ E  RSF  +  Q  +++ +P ++P ++  +  ++      
Sbjct: 529 SPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKLPQALPNIMAGVNQAVMMSLSM 588

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI         PG+G  +  +I+  ++   L A   ++ +  + D++
Sbjct: 589 VVLASMI-------GAPGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 633



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 109/303 (35%), Gaps = 18/303 (5%)

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
           T    + +    L   +    F  +  W+F + L+N++  + +  G + F    +     
Sbjct: 343 TSDSGSQTSTNDLAVNSTASAFAWFPEWSFETKLNNSLSYVVQNFGEV-FRSISHVALTY 401

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFR 389
               +  +L +    +V G+   + W +   I         L++I    +      TM  
Sbjct: 402 LLLPIENLLKVTPPWLVLGLIALLGWFATRKIWFAVACGAGLFLIGAFGLWPALVQTMAL 461

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++V +++  +I IP+GI +     +   + P   ++   P+ V+   V+           
Sbjct: 462 LIVSVLVTMVIGIPIGILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG----K 517

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +      +      ++   + G    P++  E   SF  T  +   +I LP   P  + G
Sbjct: 518 VPALFATVIYASPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKLPQALPNIMAG 577

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   + +  +++ +           GLG  + +S +  +  + +     +    + +
Sbjct: 578 VNQAVMMSLSMVVLASMIG-------APGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIII 630

Query: 570 NRF 572
           +R 
Sbjct: 631 DRI 633


>gi|269794999|ref|YP_003314454.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097184|gb|ACZ21620.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 322

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+    +A+++ IP+G+ +G        + P   L    P   + PL +  + Y
Sbjct: 128 GASTVRVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPLTLLIIGY 187

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+     + IL N I+G    P    E AS       +    +ILP   
Sbjct: 188 GDGS----AIFLVFLAAFFPILLNTISGVRQVPVRLVEAASMLGTRSGQVLYKVILPASM 243

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              V G   A G +W   +V E          +TGLGA I ++ +      +V G++++ 
Sbjct: 244 RSIVGGLRIALGLSWVILVVGETVGI------STGLGAMITQARDMSKTDLIVAGMVVIG 297

Query: 564 CFVLALNRFL 573
                 +R L
Sbjct: 298 LAGFVADRLL 307



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 81/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   +T+R+LS   ++ L       +  +      +L P +++ + IP+  +   
Sbjct: 121 GTLLDHLGASTVRVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPL 180

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T++               +AIF +F +  + +  +    +  +P  L E +        Q
Sbjct: 181 TLLIIGYGDG--------SAIFLVFLAAFFPILLNTISGVRQVPVRLVEAASMLGTRSGQ 232

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P SM  +V  + +++   W  +V  E + +        G+G+ I  A      
Sbjct: 233 VLYKVILPASMRSIVGGLRIALGLSWVILVVGETVGIST------GLGAMITQARDMSKT 286

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  M+ +    F+ D+LL
Sbjct: 287 DLIVAGMVVIGLAGFVADRLL 307


>gi|319793147|ref|YP_004154787.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315595610|gb|ADU36676.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 268

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V+     ++ RV +   +A+I  + +G+ IG        + P  ++L   PA  + PL +
Sbjct: 66  VLQHLSASLRRVFIGFGLAAIAGVALGLAIGRARWAEDTLLPPLEVLRPIPAVAWIPLAI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    +  +   G  + +L N + G  A        A S        +R +I
Sbjct: 126 LMFPSSEAS----MVFITFIGALFPVLLNTVHGVEAVDARLVASARSLGAGRLAVFREVI 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  VTG     G AW   + +E+ S         G+G Y   S    ++ ++V+G
Sbjct: 182 LPGALPSVVTGLAIGMGTAWFCLVTAEMISG------QFGIGYYTWMSYTIQNYADIVVG 235

Query: 559 VLIMCCFVLALNRFLWH 575
           +L +    +  +  +  
Sbjct: 236 MLFIGVLGMGSSALVRR 252



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 89/223 (39%), Gaps = 14/223 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            Q    PR++ +     +    + Q+ S +  R+     ++ +          ++R    
Sbjct: 44  FQNVPPPREVAESAWSLVQSPLVLQHLSASLRRVFIGFGLAAIAGVALGLAIGRARWAED 103

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L+P L++++ IP + ++   ++ F          +E + +F  F   ++ +  +    +
Sbjct: 104 TLLPPLEVLRPIPAVAWIPLAILMF--------PSSEASMVFITFIGALFPVLLNTVHGV 155

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L   +RS        F  + +P ++P +V  + + M   WF +V +EMI     
Sbjct: 156 EAVDARLVASARSLGAGRLAVFREVILPGALPSVVTGLAIGMGTAWFCLVTAEMISG--- 212

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                GIG Y  ++   Q+   I+  ML +  +      L+ R
Sbjct: 213 ---QFGIGYYTWMSYTIQNYADIVVGMLFIGVLGMGSSALVRR 252


>gi|319763463|ref|YP_004127400.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|330824290|ref|YP_004387593.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118024|gb|ADV00513.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|329309662|gb|AEB84077.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 279

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 105/281 (37%), Gaps = 15/281 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P     ++  R  G+          ++        +  + W     G  +   + +   
Sbjct: 8   APALGRQERRPRRRGLAPLEPVSARTRVALGVGFFVLFFVVWAFFTLGGFVSPTFLASPI 67

Query: 367 IVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +    +       +L    +T++RV+   ++A+++ +P+GI +G    + + ++PF   
Sbjct: 68  TMAREGWLLFTEFGFLHDIGMTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLEPFVSF 127

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               PA+ F PL++       L       L++  G+ + I+  V         D  E A 
Sbjct: 128 CRYLPASAFIPLLILWAGLGELQK----LLVIFIGSVFQIILMVAVTVGNARKDLVEAAY 183

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   +     R +++PG  P          G AW   IV+E+          +G+G  I 
Sbjct: 184 TLGASSSGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SASGIGHMIT 237

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582
           +S    +  +++ G++++    L  +         L+ +  
Sbjct: 238 DSQALLNTGQIIFGIIVIGLIGLVSDVLFKAVNRRLFAWSA 278



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 81/229 (35%), Gaps = 17/229 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +     +             T  R+L   V++ +            + +   L 
Sbjct: 63  LASPITMAREGWLLFTEFGFLHDIGMTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLE 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   + +P   F+   +++            EL  +  IF   V+ +   +  ++ N 
Sbjct: 123 PFVSFCRYLPASAFIPLLILWAGLG--------ELQKLLVIFIGSVFQIILMVAVTVGNA 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +DL E + +   S       + +P + P +   + + +   W +V+ +E+I        
Sbjct: 175 RKDLVEAAYTLGASSSGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSAS---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
             GIG  I  +    +   I++ ++ +  +  + D L   + R +  WS
Sbjct: 231 --GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDVLFKAVNRRLFAWS 277


>gi|330874200|gb|EGH08349.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 285

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 92/276 (33%), Gaps = 21/276 (7%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P +   +    T  +             +     ++  +F       +  G    + GY+
Sbjct: 23  PAARRPRVYPSTRTISALTLVTLLALWWAVTAGGWIEPLFLPPPADVLGKGWLLMTKGYM 82

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +                ++ R+ + +  A++  IPVGI IG          P  +    
Sbjct: 83  DSTLWQH--------LGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRP 134

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL+V        +      LL+       I      G           A S  
Sbjct: 135 IPPLAYLPLIVIWFGIGEFSK----VLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLG 190

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T W+  R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  +  + 
Sbjct: 191 ATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAA 244

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +      VVLG+L++     A+    R L   L  +
Sbjct: 245 QFLVTDVVVLGILVIAIIAFAMELGLRALQRKLVPW 280



 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    V  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|71733936|ref|YP_274863.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554489|gb|AAZ33700.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 268

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P +IV  +   L   +L ++ S + LR+LS  VI    
Sbjct: 25  VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 83

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+A     SR     L P    ++SIP L ++   +++            E + I  I
Sbjct: 84  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 135

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 136 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 195

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 196 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 249

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 250 EKRFLAWRDTFTGQSREGR 268



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+   +I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 68  ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 127

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   +  + +R  R I+LP   P
Sbjct: 128 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 183

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++++  
Sbjct: 184 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 237

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 238 LGKLSDGLL 246


>gi|49482416|ref|YP_039640.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|221140719|ref|ZP_03565212.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|257424312|ref|ZP_05600741.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426989|ref|ZP_05603391.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429626|ref|ZP_05606013.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432273|ref|ZP_05608636.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435232|ref|ZP_05611283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282902764|ref|ZP_06310657.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907166|ref|ZP_06315014.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282907508|ref|ZP_06315350.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282912411|ref|ZP_06320207.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282913030|ref|ZP_06320822.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282915503|ref|ZP_06323275.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus D139]
 gi|282921446|ref|ZP_06329164.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C427]
 gi|282922657|ref|ZP_06330347.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C101]
 gi|283767915|ref|ZP_06340830.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus H19]
 gi|283959621|ref|ZP_06377062.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293498084|ref|ZP_06665938.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293511673|ref|ZP_06670367.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus M809]
 gi|293550283|ref|ZP_06672955.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295426719|ref|ZP_06819358.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297589080|ref|ZP_06947721.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|304380137|ref|ZP_07362857.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|49240545|emb|CAG39202.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257273330|gb|EEV05432.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276620|gb|EEV08071.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257280107|gb|EEV10694.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283152|gb|EEV13284.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285828|gb|EEV15944.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|269939700|emb|CBI48068.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282314878|gb|EFB45264.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C101]
 gi|282315861|gb|EFB46245.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus C427]
 gi|282320606|gb|EFB50944.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus D139]
 gi|282323130|gb|EFB53449.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282324107|gb|EFB54423.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282328413|gb|EFB58684.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330065|gb|EFB59586.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282597223|gb|EFC02182.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|283461794|gb|EFC08878.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus H19]
 gi|283469415|emb|CAQ48626.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283789213|gb|EFC28040.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290919330|gb|EFD96406.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291097015|gb|EFE27273.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291465631|gb|EFF08163.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus M809]
 gi|295129171|gb|EFG58798.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297577591|gb|EFH96304.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|302750054|gb|ADL64231.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341118|gb|EFM07037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312436716|gb|ADQ75787.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194629|gb|EFU25018.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|329312871|gb|AEB87284.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus T0131]
          Length = 253

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +    + Q+ + +  R ++  V++LL       L  ++R L   + 
Sbjct: 37  LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++ I  + +  F V++F            L AI  IF +  + + F+  + + +I
Sbjct: 97  PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +++ +  L+GW  +  +  P +   ++  + M++   W F+V+ EMI        
Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    +L  +L A+  +    F+ D+ +
Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240


>gi|209516010|ref|ZP_03264870.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
 gi|209503470|gb|EEA03466.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner
           membrane subunits [Burkholderia sp. H160]
          Length = 148

 Score =  133 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 78/132 (59%), Positives = 102/132 (77%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ PN +D +AF L+I +I +   G  ET  P   +    I+LD  +LP+YA RTTLRML
Sbjct: 17  RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AMV SL+FT  Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G
Sbjct: 77  AAMVASLIFTLSYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136

Query: 134 AELAAIFAIFTS 145
           AELAAIFAIFTS
Sbjct: 137 AELAAIFAIFTS 148


>gi|254562523|ref|YP_003069618.1| ABC transporter membrane protein [Methylobacterium extorquens DM4]
 gi|254269801|emb|CAX25774.1| ABC superfamily transporter membrane protein [Methylobacterium
           extorquens DM4]
          Length = 291

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+   + A  + + +G+ IG        + P  ++L   PA  + PL +     
Sbjct: 95  GASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFP- 153

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + ++ +   G  + IL N + G  +        A S         R +ILPG  
Sbjct: 154 ---SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAA 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  VTGA    G AW   + +E+ S  +      G+G +  ES    ++ ++V+G+L++ 
Sbjct: 211 PSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLIG 264

Query: 564 CFVLA 568
              + 
Sbjct: 265 LLGMG 269



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ L   +    P          +   +LP +   +  R+LS  + +L           
Sbjct: 61  LDLGLVTFRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIG 120

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +L+P L++++ IP + ++   ++ F          +E++  F  FT  ++ + 
Sbjct: 121 RSRLARDLLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 172

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + ++   L   +RS           + +P + P +V    + M   WF +V +E
Sbjct: 173 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAE 232

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           MI          GIG +   +   Q+   I+  ML +  +  
Sbjct: 233 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 268


>gi|317406801|gb|EFV86921.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 205

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV V + +A  I +P+G+ IG    + + + P  Q L       + P+ V     
Sbjct: 17  LVSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSWMPIAVMVFGV 76

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  L+ F   W I  N  AG       + ++A S   T W   R++ILPG+ 
Sbjct: 77  GDD----PVYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAATRWETLRHVILPGVL 132

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG   A G  W   +  E+         + G+G +I ++ ++ ++ E++  VL++ 
Sbjct: 133 GHILTGVRLAIGILWIVLVPCEMLG------VSAGMGYFILDTRDRLAYSELMAMVLLIG 186

Query: 564 CFVLALNRFLWHPLYLY 580
               AL+      LY Y
Sbjct: 187 ALGFALDAAA-RALYRY 202



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    LP +   +  R+   + ++L             RRL   L P +  ++ I  L +
Sbjct: 7   LTGSDLPLHVLVSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSW 66

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+ F           +    F +  + VW +  +    +  +     ++++S   +
Sbjct: 67  MPIAVMVFGVG--------DDPVYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAAT 118

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+   ++ +P  +  ++  + +++   W  +V  EM+ V        G+G +I      
Sbjct: 119 RWETLRHVILPGVLGHILTGVRLAIGILWIVLVPCEMLGVSA------GMGYFILDTRDR 172

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
                ++  +L +  + F  D
Sbjct: 173 LAYSELMAMVLLIGALGFALD 193


>gi|190894928|ref|YP_001985221.1| putative glycine betaine/L-proline ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700589|gb|ACE94671.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 295

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     RT   +    V+S+        L A+S RL  ++ PILD+MQ++P   +L   V
Sbjct: 96  MWDDTMRTVSMIFVCTVLSIAIGIPIGILMARSDRLQRIVNPILDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S  QK 
Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSRSQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 87/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q       + +L I WF  
Sbjct: 16  RNLKKAIDDGFRGFTRSYGDGIESLFVPLQHFLIAAERFMTQTPWPIITAIILAIAWFGS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +     ++  I     + D +        T+  + V  +++  I IP+GI +   
Sbjct: 76  RSLKVVAGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPIGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   + P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 DRLQRIVNPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSRSQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|254303132|ref|ZP_04970490.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148323324|gb|EDK88574.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 250

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+    ++S+  I +GI++G    I    Q     +   P   + PL++      
Sbjct: 59  LSLRRVLGGFFLSSVFGILLGIFMGISQKIKEFFQLTLTAIRQIPMIAWIPLIILWAGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      ++++F   + I+ N ++G  +    + EVA  + ++    +  + LP   P
Sbjct: 119 EISK----IVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKETFFKVYLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       +W A + SE+ +       ++G+G  + ++        V++ ++++  
Sbjct: 175 NIFTGLRLGLSSSWMAVVASELIA------SSSGIGYRLNDARSLMKSDVVIVCMIVIGL 228

Query: 565 FVLALNRFL 573
             L +++ +
Sbjct: 229 IGLLMDKLI 237



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 83/201 (41%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    S +  R+L    +S +F  +       S+++       L  ++ IP++ ++  
Sbjct: 51  GQLYNDLSLSLRRVLGGFFLSSVFGILLGIFMGISQKIKEFFQLTLTAIRQIPMIAWIPL 110

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E++ I  I  +  + +  +    + +      EV++ + LS  +
Sbjct: 111 IILWAGIG--------EISKIVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKE 162

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P ++P +   + + +S  W  VVASE+I          GIG  +  A      
Sbjct: 163 TFFKVYLPSALPNIFTGLRLGLSSSWMAVVASELIASSS------GIGYRLNDARSLMKS 216

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  M+ +  +  L D+L+
Sbjct: 217 DVVIVCMIVIGLIGLLMDKLI 237


>gi|94311790|ref|YP_585000.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355642|gb|ABF09731.1| taurine ABC-type transporter, permease component: TauT family
           [Cupriavidus metallidurans CH34]
          Length = 291

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 20/260 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDI---FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
              R   P     +  + R  ++L +     F  V  VA    + S  ++ +  T     
Sbjct: 25  PARRARHPWMSPLVPVSPRARWLLGMSFFVAFFAVWAVATLGGFVSRTFLADPLTMAHEG 84

Query: 378 -------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                    I    +T++RVV   ++A+++ +P+GI++G      +  +PF       PA
Sbjct: 85  WRLFTQYGFIGDIGMTVWRVVGGFVLAALLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPA 144

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           + F PL++               L++  G+ + I+  V         D  E A +   T 
Sbjct: 145 SAFIPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATP 200

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R +++PG  P          G AW   IV+E+         ++G+G  I +S    
Sbjct: 201 RGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALL 254

Query: 551 SFPEVVLGVLIMCCFVLALN 570
           +  +++ G++++ C  L  +
Sbjct: 255 NTGQIIFGIIVIGCIGLVSD 274



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 79/239 (33%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +AF  V  +  +     +     P  +          +        T  R++   V++ 
Sbjct: 53  FVAFFAVWAVATLGGFVSRTFLADPLTMAHEGWRLFTQYGFIGDIGMTVWRVVGGFVLAA 112

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L            +       P +   + +P   F+   +++       K++        
Sbjct: 113 LLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 164

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  ++    +DL E + +   +       + +P + P +   + + +
Sbjct: 165 VIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATPRGIVRRVLIPGAAPDIAETLRLVL 224

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D + 
Sbjct: 225 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVF 277


>gi|294501451|ref|YP_003565151.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus
           megaterium QM B1551]
 gi|294351388|gb|ADE71717.1| aliphatic sulfonates ABC transporter, permease protein SsuC
           [Bacillus megaterium QM B1551]
          Length = 284

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 102/256 (39%), Gaps = 18/256 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  ++V  II    +  +     P DIV      +    L      + LR      +   
Sbjct: 43  LLLIVVWQIIGSAGYVSKTVLPTPVDIVLSFKQLIVSGELGANLQISILRAAIGFAVGAG 102

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  +   S++    + P + +++++P L      +++F           E++ I  
Sbjct: 103 LGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFG--------FGEISKILL 154

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  + Y  +  +   L +V+R  + S W++   L +P ++P ++  + +S+ 
Sbjct: 155 IANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALPNILLGVRLSLG 214

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++   +      G+G  I  A +      +   ++    V  L D   ++
Sbjct: 215 IAWLGLVVAELMGASE------GVGYMIMDARQFSQTDVVFVGIIIFAVVGKLTDSFVRV 268

Query: 259 LFRPMIVWSNKFRLER 274
           L + ++ W + +  E+
Sbjct: 269 LEKRLLKWRDSYAGEK 284



 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R  +   + + + +  G+ +GF       + P  Q+L   P     PL +    + 
Sbjct: 88  ISILRAAIGFAVGAGLGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      LL+  G  + I  N   G     +   +VA     + W+    +ILP   P
Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW   +V+E+         + G+G  I ++ +      V +G++I   
Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257

Query: 565 FVLALNRFL 573
                + F+
Sbjct: 258 VGKLTDSFV 266


>gi|302556764|ref|ZP_07309106.1| taurine ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
 gi|302474382|gb|EFL37475.1| taurine ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
          Length = 289

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 17/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P   RR  P   + ++  L I +   L     +   P ++V      ++  +L +    +
Sbjct: 39  PGTGRRGLPLALNAVSVALGIALWWALASAGFKLPTPPEVVSRAGTLIEDGTLGEDVLAS 98

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L    +          L         ++ P +   +++P L  +   VV       
Sbjct: 99  LTRVLIGFALGTAAAVPVGFLMGWYGIARGLMEPWIQFFRTVPPLAIIPLAVVVMGIDET 158

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +       S +Q + N+ R L   +R         F  + VP S
Sbjct: 159 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVPAS 210

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  M + +   W  +VA+E+I          G+G  +  A    DL  I   ++++
Sbjct: 211 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 264

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             +  L D++L    R +  W  +
Sbjct: 265 GILGLLMDRILLLAERKLTGWQER 288



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 86/267 (32%), Gaps = 21/267 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380
           +   +     R    L +    V  G+A+  A  S G+ +           T  +   + 
Sbjct: 33  KTAAERPGTGRRGLPLALNAVSVALGIALWWALASAGFKLPTPPEVVSRAGTLIEDGTLG 92

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV++   + +   +PVG  +G+       ++P+ Q     P     PL V  
Sbjct: 93  EDVLASLTRVLIGFALGTAAAVPVGFLMGWYGIARGLMEPWIQFFRTVPPLAIIPLAVVV 152

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +             ++        + +   G           A          +  +++P
Sbjct: 153 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVP 208

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+ + G     G AW   + +E+ +         GLG  +  +      P + +G++
Sbjct: 209 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 262

Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584
            +    L ++R L      L  +  R 
Sbjct: 263 SIGILGLLMDRILLLAERKLTGWQERR 289


>gi|169629549|ref|YP_001703198.1| putative sulfonate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169241516|emb|CAM62544.1| Putative sulfonate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 274

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 27/262 (10%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--------------- 370
             P          + + +L   W   +   A    W     +++                
Sbjct: 6   RAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFR 65

Query: 371 --FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 +   ++    I+++R+++ + +A++I +P G+ +G         +P  Q L   
Sbjct: 66  AAMDLLNRGVLLQDAGISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMI 125

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + P+ V+         N  +  L+     W IL N  AG  +    +  VA SFH 
Sbjct: 126 SPLSWTPIAVAVFGIG----NQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHA 181

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T       +ILP I  +  TG   A G AW   + +E+          +GLG  +  + +
Sbjct: 182 TRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLG------VRSGLGYQVLNARD 235

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           + ++ +VV  +L++     AL+
Sbjct: 236 QLAYDQVVAVILVIGILGYALD 257



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 99/267 (37%), Gaps = 20/267 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILL---HGIQETTVPRDIVDIVPITLDVHSLPQYA 65
             +  RI+P    + A V V  + + +L   + +   T P          L+   L Q A
Sbjct: 21  ALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDA 80

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L  + ++ +       L   S        P++  ++ I  L +    V  F  
Sbjct: 81  GISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGI 140

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +F I T+ VW +  +    + +I      V+RSF  +  +    + +
Sbjct: 141 GNQP--------VVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHATRSEVLTAVIL 192

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P     +   + +++   W  +V +EM+ V        G+G  +  A  +     ++  +
Sbjct: 193 PAIRGHIQTGIRVALGVAWVVLVPAEMLGV------RSGLGYQVLNARDQLAYDQVVAVI 246

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRL 272
           L +  + +  D    R +   +++FR+
Sbjct: 247 LVIGILGYALDMAAKRLL---ASRFRV 270


>gi|325959393|ref|YP_004290859.1| ABC transporter integral membrane subunit [Methanobacterium sp.
           AL-21]
 gi|325330825|gb|ADZ09887.1| ABC-type transporter, integral membrane subunit [Methanobacterium
           sp. AL-21]
          Length = 245

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RV++  I+A+I+ +P+GI IG+   + + +     +L   P   + P  +       
Sbjct: 59  TLSRVILGFIVAAIVAVPLGILIGWSETVENYLSFIIGILRPIPPIAWIPFAILWFGLGL 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       ++  G+ + IL +   G       + E A +      +  + ++ P   P 
Sbjct: 119 GS----AIFIIFVGSVFPILISTADGVKRIDKVYIESAYTLGADKLQTIKKVVFPAALPN 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG     G A   ++ +E+           GLG  I  +T        ++G+L +   
Sbjct: 175 IITGLKVGMGIALMCTVAAEMIG------SNNGLGYLILTATSMLDSASAIVGMLAIGVI 228

Query: 566 VLALNRFLWH 575
            L        
Sbjct: 229 GLTFEYIFTR 238



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 85/219 (38%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+ +     L   +L Q    T  R++   +++ +       L   S  +   L  
Sbjct: 34  PSPHDVFEAFKSLLMNGTLIQDTIDTLSRVILGFIVAAIVAVPLGILIGWSETVENYLSF 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ I++ IP + ++ F +++F             +AIF IF   V+ +  S    +  I 
Sbjct: 94  IIGILRPIPPIAWIPFAILWFGLGLG--------SAIFIIFVGSVFPILISTADGVKRID 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +   E + +      Q    +  P ++P ++  + + M       VA+EMI   +     
Sbjct: 146 KVYIESAYTLGADKLQTIKKVVFPAALPNIITGLKVGMGIALMCTVAAEMIGSNN----- 200

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  I  A    D  + +  ML +  +   ++ +  R
Sbjct: 201 -GLGYLILTATSMLDSASAIVGMLAIGVIGLTFEYIFTR 238


>gi|163746321|ref|ZP_02153679.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex
           HEL-45]
 gi|161380206|gb|EDQ04617.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex
           HEL-45]
          Length = 421

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV   + +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 228 GYSLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 287

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       +L+     W +     +G S         A S   +  +  R++I+P   
Sbjct: 288 GEVGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSL 343

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +         G G  I  +++      V++G++++ 
Sbjct: 344 PEIFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVLMGIILIG 397

Query: 564 CFVLALNRFLWH 575
                ++  +  
Sbjct: 398 VIGFGIDMLMRK 409



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 17/225 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           + +I        +L ++   +  R++    +  L           S        PI++ M
Sbjct: 210 LGEISSQGYRDSTLWEHLGYSLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFM 269

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P L  +   +++      GK        I  +F + +W M  +    +  +      
Sbjct: 270 RPVPPLALIPLVIIWAGIGEVGK--------IILLFLAALWIMAIAARSGVSGVNISKVH 321

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            + S   S  Q   ++ VP S+P +     ++M   W  VVA+E++          G G 
Sbjct: 322 AAYSLGASKAQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 375

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            I +A K Q    +L  ++ +  + F  D L+    R ++ W  +
Sbjct: 376 MIMVASKFQLTDIVLMGIILIGVIGFGIDMLMRKAERVLVPWKGR 420


>gi|116749648|ref|YP_846335.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698712|gb|ABK17900.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 290

 Score =  133 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 19/203 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV++    AS I IP+G+ +G+   +     P  +L  + P   + PL +   +   
Sbjct: 97  SLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPGFELFRSVPPVAWVPLSIIIFA--- 153

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +   G  + +  N   GA +        A        + +R+I+LPG  P 
Sbjct: 154 -QMEYSIVFITFTGAFFVVALNAKLGAESIDQSLFRAAWCLGANPRQVFRHILLPGSLPS 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G AW   + +E+ +  +      GLG    ES     FPEV+L +  +   
Sbjct: 213 IFMGLALGMGIAWQTVVAAEMIAGQY------GLGYLAWESYSLIRFPEVILAMASIGVL 266

Query: 566 VLALNRFL---------WHPLYL 579
               +  L         W  +Y 
Sbjct: 267 GYVCSAILRGIANKYLAWRKVYT 289



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 76/193 (39%), Gaps = 14/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+L     +             +R +  + +P  ++ +S+P + ++  +++ F  +
Sbjct: 96  HSLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPGFELFRSVPPVAWVPLSIIIFAQM 155

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E + +F  FT   + +  +      +I + L   +     +  Q F ++ +P
Sbjct: 156 --------EYSIVFITFTGAFFVVALNAKLGAESIDQSLFRAAWCLGANPRQVFRHILLP 207

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+P +   + + M   W  VVA+EMI          G+G     +        ++ AM 
Sbjct: 208 GSLPSIFMGLALGMGIAWQTVVAAEMIAG------QYGLGYLAWESYSLIRFPEVILAMA 261

Query: 247 TMLGVIFLYDQLL 259
           ++  + ++   +L
Sbjct: 262 SIGVLGYVCSAIL 274


>gi|224827319|ref|ZP_03700410.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224600467|gb|EEG06659.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 308

 Score =  133 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV     +A +  IP+G+ +G          P  +     P   + P+V+       
Sbjct: 117 SLYRVFGAFALACVTAIPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPMVIIWFGIGE 176

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+       +  +  +G  +   +    A S   +  +  R++IL    P 
Sbjct: 177 FSK----VYLIFLAIFAPMAISARSGVRSVSIEQIHAAYSMGASRMQVIRHVILKSALPE 232

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G  W   +  E+ +       T GLG  +  + E  +   V++GV+++  F
Sbjct: 233 IFTGMRIGIGVGWTTLVAGEMVA------STRGLGFMVLNAAEFLASDVVIMGVIVIGLF 286

Query: 566 VLALNRFL 573
               +  +
Sbjct: 287 AFTFDLLM 294



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 84/218 (38%), Gaps = 17/218 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                +L ++   +  R+  A  ++ +       L   SR    V  P ++  + +P L 
Sbjct: 104 GFANATLLEHTETSLYRVFGAFALACVTAIPIGVLMGVSRVARGVFDPPIEFYRPLPPLA 163

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   +++F           E + ++ IF +    M  S    + ++  +    + S   
Sbjct: 164 YLPMVIIWFGIG--------EFSKVYLIFLAIFAPMAISARSGVRSVSIEQIHAAYSMGA 215

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q   ++ +  ++P +   M + +  GW  +VA EM+          G+G  +  A +
Sbjct: 216 SRMQVIRHVILKSALPEIFTGMRIGIGVGWTTLVAGEMVA------STRGLGFMVLNAAE 269

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
                 ++  ++ +    F +D L   L R ++ W  K
Sbjct: 270 FLASDVVIMGVIVIGLFAFTFDLLMRYLERVLVPWKGK 307


>gi|51245216|ref|YP_065100.1| ABC transporter, permease protein [Desulfotalea psychrophila LSv54]
 gi|50876253|emb|CAG36093.1| probable ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 279

 Score =  133 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 21/224 (9%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                   +  +I    I++ RV++   +A++I IP+G+ +G+          F  +   
Sbjct: 47  HPTLDLLSMGSLIANVLISLVRVIMGYALAALIAIPLGVIMGYSQLTYKFFNGFLNIFRP 106

Query: 428 FPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAG 471
            P   + PLV++      L                N    +  ++  G  + IL + I G
Sbjct: 107 IPPLAWVPLVIAWFGIASLATLVGAETGKTFIYLNNIKFSMLFIIFIGAFYPILTSTIHG 166

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                    + A     +  + ++ I++P   P  +TG     G AW   + +E+     
Sbjct: 167 VRNVNVTLIDSARVLGASERQIFQKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-- 224

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                +G+G  I  +    S   V+ G++ +      ++    H
Sbjct: 225 ---SLSGVGYLITHAFTLASTDIVIAGMISIGFVGALMDIIFRH 265



 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 17/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L + SL      + +R++    ++ L       +   S+         L+I + IP L +
Sbjct: 53  LSMGSLIANVLISLVRVIMGYALAALIAIPLGVIMGYSQLTYKFFNGFLNIFRPIPPLAW 112

Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163
           +   + +F       ++GAE               +F IF    + +  S    + N+  
Sbjct: 113 VPLVIAWFGIASLATLVGAETGKTFIYLNNIKFSMLFIIFIGAFYPILTSTIHGVRNVNV 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L + +R    S  Q F  + +P +MP ++  M + +   W  +V++EM+        L 
Sbjct: 173 TLIDSARVLGASERQIFQKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLS 227

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G  I  A        ++  M+++  V  L D + 
Sbjct: 228 GVGYLITHAFTLASTDIVIAGMISIGFVGALMDIIF 263


>gi|253730527|ref|ZP_04864692.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253725667|gb|EES94396.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 253

 Score =  133 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 104/251 (41%), Gaps = 15/251 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68
             + +    I   + F+ +  ++ I+ H        P  +   +   +    + Q+ + +
Sbjct: 4   PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +   V++LL       L  ++R L   + P+  +++ I  + +  F V++F     
Sbjct: 64  LWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L AI  IF +  + + F+  + + +I     +++ +  L+GW  +  +  P +
Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|255283058|ref|ZP_05347613.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255266360|gb|EET59565.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 267

 Score =  133 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 13/225 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + +I +         ++    ++++RV V    A+++ I +GI +G+     +  +P  
Sbjct: 51  LMAFIRSFTEPIGKQTMLVHIGVSLYRVAVAFFFATVVGISLGIAMGYSRLAEAIFKPIF 110

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           + +   P   + PL +       +        ++  G   +I  N   GA     +    
Sbjct: 111 EFIRPIPPLAWIPLSILWFGLSDVGK----FFIIFLGCFSFITVNTYDGAKNVDPELIGA 166

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A        + +  I+LP   PY   G   A    W+A + +E+           G+G  
Sbjct: 167 ARMLGANERQIFFRIVLPSAVPYIFAGLQIAVTAGWSAVVGAEMIQ------SNEGVGWV 220

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF---LWHPLYLYGTRC 584
           I      G+  ++++G++ +      L      L   L  +  + 
Sbjct: 221 IVRGMNTGNTVQIMVGIMAIGIVGFILANLTSALERRLCAWNEQK 265



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 99/257 (38%), Gaps = 21/257 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74
           +  LL+ ++V  +                ++     +        ++  +   +  R+  
Sbjct: 21  VISLLSLLVVWELAARFTGASMFLPPASQVLMAFIRSFTEPIGKQTMLVHIGVSLYRVAV 80

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A   + +           SR    +  PI + ++ IP L ++  ++++F     GK    
Sbjct: 81  AFFFATVVGISLGIAMGYSRLAEAIFKPIFEFIRPIPPLAWIPLSILWFGLSDVGK---- 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                F IF      +T + Y    N+  +L   +R    +  Q F+ + +P ++P +  
Sbjct: 137 ----FFIIFLGCFSFITVNTYDGAKNVDPELIGAARMLGANERQIFFRIVLPSAVPYIFA 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++++ GW  VV +EMI   +      G+G  I   +   + + I+  ++ +  V F+
Sbjct: 193 GLQIAVTAGWSAVVGAEMIQSNE------GVGWVIVRGMNTGNTVQIMVGIMAIGIVGFI 246

Query: 255 YDQL---LFRPMIVWSN 268
              L   L R +  W+ 
Sbjct: 247 LANLTSALERRLCAWNE 263


>gi|329732605|gb|EGG68955.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 253

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 105/251 (41%), Gaps = 15/251 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68
             + +    I   + F+ +  ++ I+ H        P  +   +   +    + Q+ + +
Sbjct: 4   PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R ++  V++LL       L  ++R L   + P+  +++ I  + +  F V++F     
Sbjct: 64  LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L AI  IF +  + + F+  + + +I     +++ +  L+GW  +  +  P +
Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|126641766|ref|YP_001084750.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Acinetobacter baumannii ATCC 17978]
          Length = 225

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 86/210 (40%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  I   + +  +         ++FRVVV  ++A++I + +G+  G    +++ + P  +
Sbjct: 10  LDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLE 69

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   PA  + PL +        +    +  +   G  + IL N + G  A        A
Sbjct: 70  VLRPIPAVAWIPLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   +       +I+PG  P  +TG     G  W   + +E+ S         G+G + 
Sbjct: 126 KSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFT 179

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ES    ++  +V+G++++    +  +  +
Sbjct: 180 WESFTLQNYSNIVVGMVLIGALGMFSSTLV 209



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 91/222 (40%), Gaps = 14/222 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
                  P D++  +     + +  ++   +  R++   V++ L       LA + ++L 
Sbjct: 2   NFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLA 61

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             L+P L++++ IP + ++   ++ F          +E + IF  F   ++ +  +    
Sbjct: 62  AFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPILLNTVHG 113

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +   L   ++S   S     + + +P ++P ++  + + M   WF +V +EMI    
Sbjct: 114 VGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG-- 171

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 GIG +   +   Q+   I+  M+ +  +      L+
Sbjct: 172 ----QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 209


>gi|91762075|ref|ZP_01264040.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717877|gb|EAS84527.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 637

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 10/214 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           + +  +   F    +   +     +  RV++ +++  I  +P+G+++G          P 
Sbjct: 422 KVLSVVTGEFKLFKIPVPMGHIWDSFLRVLLGLVLGIIFGVPLGLFMGLNRFAKGFFDPL 481

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +L    P   + PLV++         N+    L+   +   ++ +  AGA+        
Sbjct: 482 IELYRPVPPLAWAPLVITVFGI----DNVGKVFLLFMVSFSIMIISARAGAAGTQLSKIH 537

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            + S   + W+  R++I P   P  +TG   A G  W   + +E  +       TTG+G 
Sbjct: 538 ASHSLGASKWQILRHVIFPNSLPEILTGVRVAVGMCWGTLVAAEFLAG------TTGIGF 591

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
               + +   +  + + + +M    L  +  L  
Sbjct: 592 VENVAKKYFQYEVIWITIFVMGMLGLLFDVALRK 625



 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++F          +R       P++++ + +P L +    +  F     GK        +
Sbjct: 458 IIFGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLVITVFGIDNVGK--------V 509

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +F      M  S               S S   S WQ   ++  P S+P ++  + ++
Sbjct: 510 FLLFMVSFSIMIISARAGAAGTQLSKIHASHSLGASKWQILRHVIFPNSLPEILTGVRVA 569

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   W  +VA+E +          GIG    +A K      I   +  M  +  L+D  L
Sbjct: 570 VGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIWITIFVMGMLGLLFDVAL 623

Query: 260 FRPM---IVWSNK 269
            + +   I W  K
Sbjct: 624 RKIIDKTIPWHGK 636


>gi|159037257|ref|YP_001536510.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157916092|gb|ABV97519.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 663

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 83/592 (14%), Positives = 181/592 (30%), Gaps = 57/592 (9%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L   +   I++  +     +L ++ VI +++          V         +   +  L 
Sbjct: 90  LVTFVQGLIAQPAYGRPVPVLGWLGVIALVSYASWAFANWRVALLAAGGFTL-FGLQGLW 148

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q +  T    L A+ +SLLF      LA  S R   ++ P+LD+MQ++P   +L    + 
Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGLSDRFHRLITPVLDLMQTMPTFVYLAPLTLV 208

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+            +A  A     +          + ++P    E + SF  +  Q+   
Sbjct: 209 FLIG--------PASATIATLIYAMPPAIRITAHGIRSVPAPPVEATDSFGATRRQRLTK 260

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+    
Sbjct: 261 ALLPLSKRTIVLGVNQTIMAALAMVTVAALI-------DAPGLGKTVIKALQTTDVGTAF 313

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS------------------- 283
            A + ++ +  + D+      +  +   R E+     P                      
Sbjct: 314 NAGVAIVVMAIVLDR------VTTAASVRAEQGDSTNPRTRRMLLAGFGLLAAVCSYLSY 367

Query: 284 ---WVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340
              W             +   +    +   NN+  L    G ++       L        
Sbjct: 368 TYLWAAEFPAGVRLGEHLSQGATAVTTWAQNNLSDLT---GAVKDGVTIGLLNPLEALLT 424

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
                +    +V   A+    ++               +     +T+   +V  ++   +
Sbjct: 425 ESPWWLMGAVIVALAALIGNLRAAAVAAVCVGLLVGSGLWHASMVTLAMTLVATMLVVTL 484

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + VG+W+G        I+P        PA V+    V+  S              +   
Sbjct: 485 GVVVGVWMGRSNRADRVIRPVLDAGQTMPAFVYLIPFVALFSVSR----FTAIFAGVVYA 540

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               +  V  G  A P    E A++     W+    + LP                  + 
Sbjct: 541 APVAIKIVADGVRAIPQSTVEAATAAGSNNWQTITKVQLPMARQSLTLATNQGLIYVLSM 600

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            ++  +   G +          +A  ++   + + +   + +    + L+R 
Sbjct: 601 VVIGGLVGAGALGYDV------VAGFSQGQLYGKGLAAGVAIVVLGIMLDRI 646


>gi|304405835|ref|ZP_07387493.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304345078|gb|EFM10914.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 292

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++FRV    ++A II IP+G+  G   +  + I+P  + +   PA  F PL++  V  
Sbjct: 102 GVSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIEPPMEFIRYMPAVAFIPLIMVWVGI 161

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+  G  + ++  V       P D  + + +   + W+    ++LP I 
Sbjct: 162 G----EWAKIMLIFIGCFFQLVLMVADNVRRVPRDLLQASFTLGASRWKVIETVLLPAIQ 217

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   +V+E+ +        +GLG  I ++    +  ++ +G++++ 
Sbjct: 218 PQLMHTLRLILGWAWTYLVVAELVA------VNSGLGYAIMKAQRYLNTDQIFVGIIVIG 271

Query: 564 CFVLALNRFL 573
              L  +R  
Sbjct: 272 LLGLISDRIF 281



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 86/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +++  +   L       +   +  R+    +++ +       LA   +     + 
Sbjct: 78  LPKPHEVLAELIHLLGTADYWHHIGVSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIE 137

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P ++ ++ +P + F+   +V+            E A I  IF    + +   +  ++  +
Sbjct: 138 PPMEFIRYMPAVAFIPLIMVWVGIG--------EWAKIMLIFIGCFFQLVLMVADNVRRV 189

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PRDL + S +   S W+    + +P   P L+  + + +   W ++V +E++ V      
Sbjct: 190 PRDLLQASFTLGASRWKVIETVLLPAIQPQLMHTLRLILGWAWTYLVVAELVAVNS---- 245

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +  +   I   ++ +  +  + D++ 
Sbjct: 246 --GLGYAIMKAQRYLNTDQIFVGIIVIGLLGLISDRIF 281


>gi|163737617|ref|ZP_02145034.1| ABC transporter permease protein [Phaeobacter gallaeciensis BS107]
 gi|161389143|gb|EDQ13495.1| ABC transporter permease protein [Phaeobacter gallaeciensis BS107]
          Length = 664

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 85/540 (15%), Positives = 174/540 (32%), Gaps = 56/540 (10%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L V      A  T   +L A+ I      +    A +      +L P+LD+MQ+IPI  +
Sbjct: 144 LAVFGQWDSAMVTLASVLIAVPIGAGGGLLTGIWAYRHPVGERILSPLLDLMQTIPIFAY 203

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F            ++A+ A        M      +L ++  ++ +  R    +
Sbjct: 204 LVPILFMFG--------FGPVSALVATIIYATPPMIRVTILALKSVDPEILDFGRMAGTT 255

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q  W + VP +   L+  +   +      V+ + MI  G       G+G  +  A++ 
Sbjct: 256 PRQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAALRR 308

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295
            D+ A   A + ++ +    D+L        S  F        + A        ++T  +
Sbjct: 309 LDIGAGFEAGIAIVVLAIAVDRL--------SQAFAERMGQVHHIAPGSKATRHKRTVLV 360

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-----QRVSYMLDIFWFC 350
             +   +W         ++            + E    L  N     + V      ++  
Sbjct: 361 LSLLIITWGLGRFSPLLLQYPISQTITTGDFWSETVKYLNVNYFDAFEAVKVFFLHWFML 420

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----------------ITMFRVVVL 393
            +    +GI W     ++    ++     + L C                 +T++     
Sbjct: 421 PIKKTLLGIPWPWAVAMLTLVGWRAGGLRLALMCGSMSTLIAFSGLWAKAMVTVYLCGAS 480

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +I+A++I +P+G+           I  F   L   P+ V+   VV           + + 
Sbjct: 481 VILATLIGVPLGVLAALNKRAGVAIGLFIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIV 540

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L  +     Y       G  +   +  E       T W+  R + LP   P  + G    
Sbjct: 541 LYALAPAVRY----AAHGMRSVSGELIEAGLVSGCTRWQLLRMVRLPMALPEILLGINQT 596

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              A +  +++ +            LG  +  +  K      ++  L +    +  +R +
Sbjct: 597 IMLALSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFIAIIADRLV 649


>gi|71083507|ref|YP_266226.1| taurine uptake ABC transporter permease protein [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062620|gb|AAZ21623.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 637

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 10/214 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           + +  +   F    +   +     +  RV++ +++  I  +P+G+++G          P 
Sbjct: 422 KVLSVVTGEFKLFKIPVPMGHIWDSFLRVLLGLVLGIIFGVPLGLFMGLNRFAKGFFDPL 481

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +L    P   + PLV++         N+    L+   +   ++ +  AGA+        
Sbjct: 482 IELYRPVPPLAWAPLVITVFGI----DNVGKVFLLFMVSFSIMIISARAGAAGTQLSKIH 537

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            + S   + W+  R++I P   P  +TG   A G  W   + +E  +       TTG+G 
Sbjct: 538 ASHSLGASKWQILRHVIFPNSLPEILTGVRVAVGMCWGTLVAAEFLAG------TTGIGF 591

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
               + +   +  + + + +M    L  +  L  
Sbjct: 592 VENVAKKYFQYEVIWITIFVMGMLGLLFDVALRK 625



 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++F          +R       P++++ + +P L +    +  F     GK        +
Sbjct: 458 IIFGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLVITVFGIDNVGK--------V 509

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +F      M  S               S S   S WQ   ++  P S+P ++  + ++
Sbjct: 510 FLLFMVSFSIMIISARAGAAGTQLSKIHASHSLGASKWQILRHVIFPNSLPEILTGVRVA 569

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   W  +VA+E +          GIG    +A K      I   +  M  +  L+D  L
Sbjct: 570 VGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIWITIFVMGMLGLLFDVAL 623

Query: 260 FRPM---IVWSNK 269
            + +   I W  K
Sbjct: 624 RKIIDKTIPWHGK 636


>gi|57651175|ref|YP_185058.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161514|ref|YP_492890.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88193951|ref|YP_498738.1| hypothetical protein SAOUHSC_00138 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151220330|ref|YP_001331153.1| hypothetical protein NWMN_0118 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508439|ref|YP_001574098.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|258451611|ref|ZP_05699637.1| ABC transporter [Staphylococcus aureus A5948]
 gi|262048266|ref|ZP_06021152.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30]
 gi|262051065|ref|ZP_06023290.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3]
 gi|284023186|ref|ZP_06377584.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|294849107|ref|ZP_06789851.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9754]
 gi|57285361|gb|AAW37455.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127488|gb|ABD22002.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201509|gb|ABD29319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150373130|dbj|BAF66390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160367248|gb|ABX28219.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257860659|gb|EEV83481.1| ABC transporter [Staphylococcus aureus A5948]
 gi|259160968|gb|EEW45987.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3]
 gi|259163576|gb|EEW48132.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30]
 gi|294823999|gb|EFG40424.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A9754]
 gi|315198394|gb|EFU28724.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141497|gb|EFW33338.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142247|gb|EFW34062.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329731875|gb|EGG68235.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 253

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 105/251 (41%), Gaps = 15/251 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRT 68
             + +    I   + F+ +  ++ I+ H          +V     +  V   + Q+ + +
Sbjct: 4   PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHLAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R ++  V++LL       L  ++R L   + P+  +++ I  + +  F V++F     
Sbjct: 64  LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L AI  IF +  + + F+  + + +I     +++ +  L+GW  +  +  P +
Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|15923164|ref|NP_370698.1| hypothetical protein SAV0174 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925878|ref|NP_373411.1| hypothetical protein SA0168 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21281877|ref|NP_644963.1| hypothetical protein MW0148 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485050|ref|YP_042271.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|148266599|ref|YP_001245542.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|150392638|ref|YP_001315313.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|156978504|ref|YP_001440763.1| hypothetical protein SAHV_0173 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316390|ref|ZP_04839603.1| hypothetical protein SauraC_09651 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253734736|ref|ZP_04868901.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255004970|ref|ZP_05143571.2| hypothetical protein SauraM_00835 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794012|ref|ZP_05642991.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258408580|ref|ZP_05680865.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421170|ref|ZP_05684097.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
 gi|258438920|ref|ZP_05690011.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258444155|ref|ZP_05692489.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258447034|ref|ZP_05695184.1| ABC transporter, permease [Staphylococcus aureus A6300]
 gi|258448492|ref|ZP_05696605.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|258455725|ref|ZP_05703680.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|269201825|ref|YP_003281094.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282893330|ref|ZP_06301563.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8117]
 gi|282926281|ref|ZP_06333913.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A10102]
 gi|295405444|ref|ZP_06815254.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8819]
 gi|296276222|ref|ZP_06858729.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297209321|ref|ZP_06925720.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244781|ref|ZP_06928661.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8796]
 gi|300911320|ref|ZP_07128769.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|13700090|dbj|BAB41389.1| SA0168 [Staphylococcus aureus subsp. aureus N315]
 gi|14245941|dbj|BAB56336.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
 gi|21203312|dbj|BAB94013.1| MW0148 [Staphylococcus aureus subsp. aureus MW2]
 gi|49243493|emb|CAG41917.1| putative transport system permease [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|147739668|gb|ABQ47966.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|149945090|gb|ABR51026.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|156720639|dbj|BAF77056.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|253727215|gb|EES95944.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257787984|gb|EEV26324.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257840589|gb|EEV65048.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842594|gb|EEV67016.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
 gi|257847796|gb|EEV71792.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850414|gb|EEV74362.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854047|gb|EEV77000.1| ABC transporter, permease [Staphylococcus aureus A6300]
 gi|257858123|gb|EEV81011.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|257861937|gb|EEV84710.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|262074115|gb|ACY10088.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282591610|gb|EFB96681.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A10102]
 gi|282764016|gb|EFC04143.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8117]
 gi|285815899|gb|ADC36386.1| ABC transporter permease protein with unknown substrate
           [Staphylococcus aureus 04-02981]
 gi|294969519|gb|EFG45538.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8819]
 gi|296886254|gb|EFH25188.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178298|gb|EFH37545.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus
           aureus A8796]
 gi|300887499|gb|EFK82695.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|312828698|emb|CBX33540.1| binding-protein-dependent transport system inner membrane component
           family protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315130148|gb|EFT86136.1| hypothetical protein CGSSa03_04749 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725698|gb|EGG62177.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 253

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 105/251 (41%), Gaps = 15/251 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68
             + +    I   + F+ +  ++ I+ H        P  +   +   +    + Q+ + +
Sbjct: 4   PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R ++  V++LL       L  ++R L   + P+  +++ I  + +  F V++F     
Sbjct: 64  LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L AI  IF +  + + F+  + + +I     +++ +  L+GW  +  +  P +
Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + M++   W F+V+ EMI          G+G  I  A    +L  +L A+  +
Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229

Query: 249 LGVIFLYDQLL 259
               F+ D+ +
Sbjct: 230 GLFGFIIDRFI 240


>gi|15668589|ref|NP_247387.1| nitrate transporter protein NrtB homolog CmpB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2501405|sp|Q57856|Y413_METJA RecName: Full=Putative ABC transporter permease protein MJ0413
 gi|1591119|gb|AAB98402.1| nitrate transporter protein (nrtB) homolog (cmpB)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 267

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 18/223 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            I           +I    I++ RV+   ++AS + IP+GI +G+   ++S      +LL
Sbjct: 54  LIHPFQGILGTGSLIDNTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELL 113

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++      ++    + +   F     IL N I+G    P    E A +
Sbjct: 114 RPIPPLAWVPLSLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKGVPTPLIEAALT 169

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
               G      +++P   P  +TG     G AW   + +E+           GLG  I  
Sbjct: 170 LGAKGRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMY 224

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579
           +        V+  ++I+    L L+R         F+W  +  
Sbjct: 225 AYSLSRMDVVIACMIIIGLIGLVLDRGLRYIEDKYFVWRKMMK 267



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL      +  R++S  +++         L    R +  +   ++++++ IP L +
Sbjct: 62  LGTGSLIDNTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAW 121

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  ++ +F           E++ IF IF    + +  +    +  +P  L E + +    
Sbjct: 122 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAK 173

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G      + +P S P ++  + +     W  VVA+EM+   +      G+G  I  A   
Sbjct: 174 GRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 228

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++  M+ +  +  + D+ L
Sbjct: 229 SRMDVVIACMIIIGLIGLVLDRGL 252


>gi|21227463|ref|NP_633385.1| ABC transporter permease [Methanosarcina mazei Go1]
 gi|20905834|gb|AAM31057.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
          Length = 262

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++    + I  A I+ IP+GI +G+    +  I P  ++L   P   + P  +     
Sbjct: 64  LTSLLHFSIGIAAAFILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGI 502
            H         ++  G  + I+ N   G    P  + E A     T      RYI +P  
Sbjct: 124 TH----QAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSA 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G   A G  W   + +E+       +   GLG  I  +        V++ +L++
Sbjct: 180 MPSIAAGIRIAMGVGWMCLVAAEMFG-----VSNRGLGYQIWHNYYLHRMDFVLVYMLLL 234

Query: 563 CCFVLALNRFL 573
               L ++RF 
Sbjct: 235 GFIGLFIDRFF 245



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 15/240 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+  V +  ++   ++          D+V+   + +    +      + L     +  + 
Sbjct: 19  LVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIYTDTLTSLLHFSIGIAAAF 78

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       +    +     + PI++I++ IP L ++ F +V+F             AA F
Sbjct: 79  ILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGL--------THQAAGF 130

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMS 199
            +F   ++ +  + Y    N+PR   E ++    +       Y+ +P +MP +   + ++
Sbjct: 131 VVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSAMPSIAAGIRIA 190

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           M  GW  +VA+EM  V +      G+G  I        +  +L  ML +  +    D+  
Sbjct: 191 MGVGWMCLVAAEMFGVSNR-----GLGYQIWHNYYLHRMDFVLVYMLLLGFIGLFIDRFF 245


>gi|307324086|ref|ZP_07603295.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306890535|gb|EFN21512.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 18/266 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P    R + P +F L+A VL + I  +    G+ +   P  +       L   +L Q A 
Sbjct: 17  PRGARRTVHPLVFHLIALVLGVAIWALTAAAGLADIPGPLSVSSRARELLADGTLTQDAL 76

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+L    +  L       L         +L P +   ++IP L  +   +V     
Sbjct: 77  ASLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIG 136

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        IF IF +   +   + +Q +  + R L + +R    S    F  + +P
Sbjct: 137 ETPK--------IFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRTVFLKVVIP 188

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S P ++  M + +   W  VVA+EMI          G+G  +  A    D+  I   ++
Sbjct: 189 ASTPFILVGMRIGLGAAWATVVAAEMIG------AQKGLGFEMVHAQTYYDVPTIFVGLI 242

Query: 247 TMLGVIFLYDQLLF---RPMIVWSNK 269
           ++  +  + D+LL    R +  W  +
Sbjct: 243 SIGVIGLVMDRLLLVAERRLTAWQER 268



 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 84/262 (32%), Gaps = 13/262 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
                 +       ++ +L +  + +     +      +              +      
Sbjct: 18  RGARRTVHPLVFHLIALVLGVAIWALTAAAGLADIPGPLSVSSRARELLADGTLTQDALA 77

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++   + +++ +PVG  +G+ P     ++P+ Q     P     PLV+  +    
Sbjct: 78  SLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIGE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++        +     G +       + A     +    +  +++P   P+
Sbjct: 138 T----PKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRTVFLKVVIPASTPF 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   + +E+           GLG  +  +      P + +G++ +   
Sbjct: 194 ILVGMRIGLGAAWATVVAAEMIG------AQKGLGFEMVHAQTYYDVPTIFVGLISIGVI 247

Query: 566 VLALNRFLW---HPLYLYGTRC 584
            L ++R L      L  +  R 
Sbjct: 248 GLVMDRLLLVAERRLTAWQERR 269


>gi|124266117|ref|YP_001020121.1| ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124258892|gb|ABM93886.1| ABC transporter permease protein [Methylibium petroleiphilum PM1]
          Length = 258

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 10/184 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     +A+ + +P+G+++G+       + P  + L   P   + PL +   S  
Sbjct: 60  ASVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFS-- 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  L    + +    N + G  +    +   A     + W+ +R +I+PG  P
Sbjct: 118 --GTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  TG   + G AW + +  E+ S         GLG  I  S     +P +V+G++ +  
Sbjct: 176 YIFTGLQISVGVAWFSLVAGEMVSGE------FGLGYVINTSYTMVQYPTIVIGMVTLGA 229

Query: 565 FVLA 568
               
Sbjct: 230 VGYV 233



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 14/191 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+ +A  ++             S+     + PI + ++ IPIL ++   ++ F
Sbjct: 57  HIWASVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMF 116

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    G E   IF  F +  +    +    + +I       +     S WQ F  +
Sbjct: 117 S--------GTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREV 168

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP SMP +   + +S+   WF +VA EM+          G+G  I  +        I+ 
Sbjct: 169 IVPGSMPYIFTGLQISVGVAWFSLVAGEMVSG------EFGLGYVINTSYTMVQYPTIVI 222

Query: 244 AMLTMLGVIFL 254
            M+T+  V ++
Sbjct: 223 GMVTLGAVGYV 233


>gi|256392966|ref|YP_003114530.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256359192|gb|ACU72689.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 314

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 88/260 (33%), Gaps = 11/260 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           ++  +   R  G +R       L+  S         +     V          S G +  
Sbjct: 41  TDRAETRQRRDGELRTKAGRRLLRCVSLGAAILAWQLLTTHQVTFWIRFGNLPSAGAVAT 100

Query: 370 HFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            F +Q    V +     ++ R++   +IA +  I  GI +         + P  +++   
Sbjct: 101 DFRHQLGTAVYYQDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPI 160

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    P+ +        +    +  +      + IL +      A P   ++   +   
Sbjct: 161 PAIALVPIAILAFP----SNEQGMVFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGA 216

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W   R ++LPG  P    G     G AW   I +E+ S  +      G+G    E+  
Sbjct: 217 GRWTVLRRVVLPGALPGVFGGLSVGMGVAWICVISAEMISGQY------GIGYRTWEAYT 270

Query: 549 KGSFPEVVLGVLIMCCFVLA 568
              +P VV+G+L +     A
Sbjct: 271 VVDYPSVVVGMLTIGLLGGA 290



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + + LR+L   +I+ L         A+SR    +L P+L++++ IP +  +   ++ 
Sbjct: 113 QDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILA 172

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F +   G         +F   T+  + +  S   ++  +P  +E+  R+     W     
Sbjct: 173 FPSNEQGM--------VFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGAGRWTVLRR 224

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PG+   + + M   W  V+++EMI          GIG     A    D  +++
Sbjct: 225 VVLPGALPGVFGGLSVGMGVAWICVISAEMISG------QYGIGYRTWEAYTVVDYPSVV 278

Query: 243 YAMLTMLGVI---FLYDQLLFRPMIVWSNK 269
             MLT+  +        +L  R +  W  +
Sbjct: 279 VGMLTIGLLGGATAAAVELAGRRVTGWLPR 308


>gi|323463373|gb|ADX75526.1| ABC transporter, permease protein [Staphylococcus pseudintermedius
           ED99]
          Length = 254

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R +V  +IA ++ IP+GI +G    +   I+P  Q +       + P 
Sbjct: 54  GEIFLHLGISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V       L     + +   F     I+FN I G     N + ++A + ++ GW  +R 
Sbjct: 114 IVLWFGIGSLPAIFIIFIAAFFP----IIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRD 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II PG F + ++G   A G +W   +  E+          +GLG  I +S    +  +V+
Sbjct: 170 IIFPGAFKHIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++R +
Sbjct: 224 SSIFFIGIFGFLIDRII 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 101/248 (40%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           ++     +    F+L+   +I I  +       P  +   +   +    +  +   +  R
Sbjct: 7   KKYLRPFYTFALFLLLWQCVIWIGHYQPVLLPGPFHVAQSIGNFIITGEIFLHLGISLYR 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   +I+++       L  ++R L   + P+L  ++ I  + +  F V++F        
Sbjct: 67  FIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGIG----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L AIF IF +  + + F+  + +  I     +++ +  L GW  +  +  P +   
Sbjct: 122 ---SLPAIFIIFIAAFFPIIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFKH 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++   W F+V+ EMI          G+G  I  +    +L  +L ++  +   
Sbjct: 179 IMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSSIFFIGIF 232

Query: 252 IFLYDQLL 259
            FL D+++
Sbjct: 233 GFLIDRII 240


>gi|28872433|ref|NP_795052.1| taurine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855688|gb|AAO58747.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 285

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +  A++  IPVGI IG          P  +     P   + PL+V     
Sbjct: 91  GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I     AG           A S   T W+  R++I+P   
Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATAAGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIA 260

Query: 564 CFVLALN---RFLWHPLYLY 580
               A+    R L   L  +
Sbjct: 261 IIAFAMELGLRALQRKLVPW 280



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    +  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATAAGVRTVDPARVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|227502579|ref|ZP_03932628.1| nitrate ABC transporter permease protein [Corynebacterium accolens
           ATCC 49725]
 gi|227076741|gb|EEI14704.1| nitrate ABC transporter permease protein [Corynebacterium accolens
           ATCC 49725]
          Length = 293

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 102/293 (34%), Gaps = 24/293 (8%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +  +   S +  +  S                  +    L     +   L I +  +   
Sbjct: 1   MTTLKNHSASTSTAHSTGTHTAAPNSRRTAGRKKKRRESLWKAMGLGIALFIAFIAIWQA 60

Query: 355 VAIGI-----------AWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASII 400
           VA               W     I++   Y+D    + + W    ++ RV++   IA +I
Sbjct: 61  VAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVI 120

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+G W+G          PF Q+L       + PL ++ +     +       ++I   
Sbjct: 121 AIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLR----DAENTAVFVIILSA 176

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W  L N I         +K +A++      +   YI+ P   P  +TG   +   AW  
Sbjct: 177 LWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGIITGMRQSLSTAWLV 236

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +E+   G       G+G ++     +     +V+ ++++    LAL+  +
Sbjct: 237 IVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIGLALDYLV 283



 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 23/247 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDV--------HSLPQYASRTTLRM 72
            +AF+ +   +            P R     V I  D           +  +   +  R+
Sbjct: 51  FIAFIAIWQAVAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRV 110

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I+++           S        P + I++ +  L +L   +    +       
Sbjct: 111 LIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLRD------- 163

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            AE  A+F I  S +W    +  +++  I    + ++ +   +  Q+  Y+  P ++PG+
Sbjct: 164 -AENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGI 222

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  M  S+S  W  +VA+EM+V G       G+G ++       D+ AI+  ++ +  + 
Sbjct: 223 ITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIG 276

Query: 253 FLYDQLL 259
              D L+
Sbjct: 277 LALDYLV 283


>gi|170745423|ref|YP_001766880.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170659024|gb|ACB28078.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 295

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 17/274 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV- 376
           R    +R H  E    L     +   + ++ +     VA+ + + +I   ++      + 
Sbjct: 32  RARRWLRLHGAEFRAALIGLVSLVLFVALWQYLTANRVALYVRFLNIPTPMDVLGRAVIA 91

Query: 377 ---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                      I+  R+++  ++A  I +P+G+ +G    +     P  ++L   PA  +
Sbjct: 92  LRSPVFGDHVLISCRRILLGFLLAGGIAVPLGLLMGRYRLLREIAFPICEVLRPIPAIAW 151

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        +    +  +   G+ + IL N + G +         A     T    
Sbjct: 152 VPMAIMLWPTNEGS----IVFITFLGSFFPILINTLQGMAQVDPVLVRAARCLGATEPAV 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R + LP   P   TG     G AW + I +E+ S         G+G +  E+     +P
Sbjct: 208 FREVYLPASLPQIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYP 261

Query: 554 EVVLGVLIMCCFVLAL---NRFLWHPLYLYGTRC 584
           ++ LG++ +    L      R +   +  +    
Sbjct: 262 DIALGMITIGLLGLGSSFAIRLVGRLVMPWAAAR 295



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           R     +  L+ FV +   +      L         P D++    I L       +   +
Sbjct: 45  RAALIGLVSLVLFVALWQYLTANRVALYVRFLNIPTPMDVLGRAVIALRSPVFGDHVLIS 104

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L   +++         L  + R L  +  PI ++++ IP + ++   ++ +     
Sbjct: 105 CRRILLGFLLAGGIAVPLGLLMGRYRLLREIAFPICEVLRPIPAIAWVPMAIMLW----- 159

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + +F  F    + +  +  Q +  +   L   +R    +    F  + +P S
Sbjct: 160 ---PTNEGSIVFITFLGSFFPILINTLQGMAQVDPVLVRAARCLGATEPAVFREVYLPAS 216

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + + M   W  ++A+EMI          GIG +   A        I   M+T+
Sbjct: 217 LPQIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYPDIALGMITI 270

Query: 249 LGVIF---LYDQLLFRPMIVWS 267
             +        +L+ R ++ W+
Sbjct: 271 GLLGLGSSFAIRLVGRLVMPWA 292


>gi|163852761|ref|YP_001640804.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664366|gb|ABY31733.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 291

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 10/262 (3%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+     +  R                 +   +++ L       +  V           
Sbjct: 18  APVRAPRGRPVRPARPSSLRRLALRGVALALSLMAWHLAASSRLDLGLVTFRNVPTPAAA 77

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               +       +      ++ RV+   + A  + + +G+ IG        + P  ++L 
Sbjct: 78  AQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLR 137

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             PA  + PL +        +  + ++ +   G  + IL N + G  +        A S 
Sbjct: 138 PIPAVAWIPLAILMFP----SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSL 193

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                   R +ILPG  P  VTGA    G AW   + +E+ S  +      G+G +  ES
Sbjct: 194 GAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWES 247

Query: 547 TEKGSFPEVVLGVLIMCCFVLA 568
               ++ ++V+G+L++    + 
Sbjct: 248 YTLQNYDDIVVGMLLIGLLGMG 269



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ L   +    P          +   +LP +   +  R+LS  + +L           
Sbjct: 61  LDLGLVTFRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIG 120

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +L+P L++++ IP + ++   ++ F          +E++  F  FT  ++ + 
Sbjct: 121 RSRLARDLLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 172

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + ++   L   +RS           + +P + P +V    + M   WF +V +E
Sbjct: 173 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAE 232

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           MI          GIG +   +   Q+   I+  ML +  +  
Sbjct: 233 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 268


>gi|332383238|gb|AEE68085.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis CS]
          Length = 285

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A    IP+G+ IG+    S  + P  Q L   P   + P  ++      
Sbjct: 92  STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +        L+  G  + I+ N   GA     +    AS    +  +  R ++LP   P 
Sbjct: 152 MG----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G +W A IVSE+ +        +GLG  + ++   G    V+  ++ +   
Sbjct: 208 IFTGLRIGLGISWTAVIVSEMVA------VKSGLGYVLWDAYYVGRMDIVLANMVSIGMM 261

Query: 566 VLALNRFL 573
               +R +
Sbjct: 262 GFLSDRLI 269



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 14/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T+R+     +++            SR    +L P++  ++ IPI  +L F++  F   
Sbjct: 91  YSTMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIR 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   ++ +IF IF    + +  +  Q   ++ R+L   +     S  Q    + +P
Sbjct: 151 --------DMGSIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLP 202

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP +   + + +   W  V+ SEM+ V        G+G  +  A     +  +L  M+
Sbjct: 203 AAMPSIFTGLRIGLGISWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIVLANMV 256

Query: 247 TMLGVIFLYDQLL 259
           ++  + FL D+L+
Sbjct: 257 SIGMMGFLSDRLI 269


>gi|220924993|ref|YP_002500295.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949600|gb|ACL59992.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 277

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV+    I   + +PVG+ +G    +   + P  Q+L   P   + PL +    
Sbjct: 81  AVASLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFG 140

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 N     L+  GT + +L N +AG     + +   A +     W  +R +ILP  
Sbjct: 141 LG----NPPALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAA 196

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            P+ + G     G A+   IV+E+ +       + GLG  I E+ E     +++
Sbjct: 197 SPFVLAGMRIGIGTAFIVVIVAEMIA------VSDGLGYRILEAREYMWSDKII 244



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 14/244 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +F  +       +     H +                L    LP  A  +  R+++   
Sbjct: 34  GLFSAVVLPPPSAVAVRWFHSLIPALPHDPQTQSYAEWLFSGELPHDAVASLGRVIAGFA 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I +        L   S RL  ++ P+L I++ IP + ++   +V+F    P         
Sbjct: 94  IGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFGLGNPP-------- 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F I     + +  +    +  +       +R+     W  F  + +P + P ++  M 
Sbjct: 146 ALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPFVLAGMR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +   +  V+ +EMI V D      G+G  I  A +      I+  MLT+  +  L D 
Sbjct: 206 IGIGTAFIVVIVAEMIAVSD------GLGYRILEAREYMWSDKIIGGMLTIGLLGLLIDS 259

Query: 258 LLFR 261
            + R
Sbjct: 260 AMSR 263


>gi|163734595|ref|ZP_02142034.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
 gi|161392088|gb|EDQ16418.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
          Length = 663

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 78/492 (15%), Positives = 159/492 (32%), Gaps = 54/492 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   ++ A  ++ +       LA +       L P+L ++Q++P   +L   V++F 
Sbjct: 151 AMETMSVLVVAAPLAFVIGLSLGILAWRKPWFNRALKPVLSVLQTLPFFTYLLPAVIFFK 210

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G   GA    I+AI       M       L  +P ++ E       S WQ   ++ 
Sbjct: 211 V---GPTAGAVATTIYAIP-----PMILMTTLGLQKVPAEVVEAGEMSGCSRWQLLRHVY 262

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +          ++    +VV    I +PG+G+ +   +    L      
Sbjct: 263 LPSARREILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEI 315

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
            +T++ +  + D++       W  K  +    G       ++ L     F+ FI  S + 
Sbjct: 316 GVTIVLLAVMLDRMS----KAWVAKQPVHFEKGTPWWKRHLIALIGVGLFVFFIVVSQFV 371

Query: 305 FFSP-------------------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
             +                          +        R+   ++   P     L     
Sbjct: 372 EVASTIGRRQNFSQGREIDVLIKGFLDINIVKTTTGFLRSFLNVQVLIPFRNFLLSIPTP 431

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              +L + +   + G    +       +V    + D         IT++ V+  + +A +
Sbjct: 432 AFILLIVAFALWLGGKKQAVLAGIFFSLVALSGWWD------RSVITLYSVISAVTLAMM 485

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +P+GIW       S++I         FP+ V+    +       +     + +  +  
Sbjct: 486 FGLPLGIWAARTEKWSNRILLVCDTAQTFPSFVYLIPAIMLFGITDVAIVFSILIFAMVP 545

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
              Y     I G  + P +  E A     T  +    + LP   P    G   A   A+ 
Sbjct: 546 LTRY----TIEGLRSVPEEMIEAADMAGATRRQKLWKVQLPLALPTMAVGFNQAIMFAFF 601

Query: 520 ASIVSEVASWGH 531
             I++       
Sbjct: 602 MVIIAAFIGTQD 613



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 97/238 (40%), Gaps = 19/238 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF+L+I    + L G ++  +      +V ++         +  T   ++SA+ ++++F 
Sbjct: 432 AFILLIVAFALWLGGKKQAVLAGIFFSLVALS----GWWDRSVITLYSVISAVTLAMMFG 487

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                 AA++ +    ++ + D  Q+ P   +L   ++ F           ++A +F+I 
Sbjct: 488 LPLGIWAARTEKWSNRILLVCDTAQTFPSFVYLIPAIMLFGI--------TDVAIVFSIL 539

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +T    + L ++P ++ E +     +  QK W + +P ++P +      ++   
Sbjct: 540 IFAMVPLTRYTIEGLRSVPEEMIEAADMAGATRRQKLWKVQLPLALPTMAVGFNQAIMFA 599

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +F V+ +  I   D       +G  +   +   D+       + +  +   +D  + +
Sbjct: 600 FFMVIIAAFIGTQD-------LGQELQRTLAGTDMGKNFVLGICVSLMALTFDLTIMK 650



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 11/213 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+        F +  ++    +   TM  +VV   +A +I + +GI    +P  +  ++
Sbjct: 128 GWRMALLGAGTFIWTALIGQWTIAMETMSVLVVAAPLAFVIGLSLGILAWRKPWFNRALK 187

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   +L   P   FF  ++  V ++ + P        I+     ++     G    P + 
Sbjct: 188 PVLSVLQTLP---FFTYLLPAVIFFKVGPTAGAVATTIY-AIPPMILMTTLGLQKVPAEV 243

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E       + W+  R++ LP      + G            +++             GL
Sbjct: 244 VEAGEMSGCSRWQLLRHVYLPSARREILVGVNQVIMLCLAMVVLTAFIGM-------PGL 296

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GA +                + +    + L+R 
Sbjct: 297 GAKLLAMMGSFKLGRSFEIGVTIVLLAVMLDRM 329


>gi|295695572|ref|YP_003588810.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295411174|gb|ADG05666.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 304

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 94/260 (36%), Gaps = 10/260 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           ++        +   P  +L L     + ++           V           + N    
Sbjct: 43  RRKPSIFKPFQPISPTWYLALALCGFIGFLGIWSLVTYTGSVDKLFLPTPTDILQNGIRM 102

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                 +     T++RV++   +A+++ +P+GI +G    I + ++P        PA+ F
Sbjct: 103 FAEFNFLNDIFATVWRVLLGFALAAVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAF 162

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  V             ++  G+ + ++  V         +  E A +        
Sbjct: 163 IPLLILWVGIGDAEK----VSVIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFV 218

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R++++P  FP          G AW   IV+E+ +        +G+G  I +S       
Sbjct: 219 VRHVVIPAAFPEIYDTLRLVLGWAWTYVIVAELVA------AKSGIGYVILQSQRMLQTA 272

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +++ G++++    L  +  +
Sbjct: 273 DIIFGIVVIGFIGLLSDLLM 292



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 88/240 (36%), Gaps = 15/240 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             + F+ +  ++       +     P DI+          +       T  R+L    ++
Sbjct: 67  GFIGFLGIWSLVTYTGSVDKLFLPTPTDILQNGIRMFAEFNFLNDIFATVWRVLLGFALA 126

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +       L    R +  +L P++   + +P   F+   +++       KV        
Sbjct: 127 AVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAFIPLLILWVGIGDAEKVS------- 179

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF   ++++   +   + ++ R+L E + +          ++ +P + P +   + + 
Sbjct: 180 -VIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFVVRHVVIPAAFPEIYDTLRLV 238

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   W +V+ +E++          GIG  I  + +      I++ ++ +  +  L D L+
Sbjct: 239 LGWAWTYVIVAELVAAKS------GIGYVILQSQRMLQTADIIFGIVVIGFIGLLSDLLM 292


>gi|33595618|ref|NP_883261.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33600132|ref|NP_887692.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33565696|emb|CAE40344.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33567730|emb|CAE31644.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 285

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A    IP+G+ IG+    S  + P  Q L   P   + P  ++      
Sbjct: 92  STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +        L+  G  + I+ N   GA     +    AS    +  +  R ++LP   P 
Sbjct: 152 MG----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G +W A IVSE+ +        +GLG  + ++   G    V+  ++ +   
Sbjct: 208 IFTGLRIGLGISWTAVIVSEMVA------VKSGLGYVLWDAYYVGRMDIVLADMVSIGMM 261

Query: 566 VLALNRFL 573
               +R +
Sbjct: 262 GFLSDRLI 269



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 14/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T+R+     +++            SR    +L P++  ++ IPI  +L F++  F   
Sbjct: 91  YSTMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIR 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   ++ +IF IF    + +  +  Q   ++ R+L   +     S  Q    + +P
Sbjct: 151 --------DMGSIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLP 202

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP +   + + +   W  V+ SEM+ V        G+G  +  A     +  +L  M+
Sbjct: 203 AAMPSIFTGLRIGLGISWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIVLADMV 256

Query: 247 TMLGVIFLYDQLL 259
           ++  + FL D+L+
Sbjct: 257 SIGMMGFLSDRLI 269


>gi|82749885|ref|YP_415626.1| ABC transporter permease [Staphylococcus aureus RF122]
 gi|82655416|emb|CAI79802.1| probable ABC transporter permease [Staphylococcus aureus RF122]
          Length = 253

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   I+A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIDSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +    + Q+ + +  R ++  +++L+       L  ++R L   + 
Sbjct: 37  LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIE 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++ I  + +  F V++F            L AI  IF +  + + F+  + + +I
Sbjct: 97  PLFQLIRPISPIAWAPFVVLWFGID--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +++ +  L+GW  +  +  P +   ++  + M++   W F+V+ EMI        
Sbjct: 149 EPQYLKIAANLNLTGWPLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    +L  +L A+  +    F+ D+ +
Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240


>gi|148547319|ref|YP_001267421.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148511377|gb|ABQ78237.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 251

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R+++ +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P   +  +   L    +  +   +  R+L  ++++LL       L    R L 
Sbjct: 34  GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILIGLLLALLMGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDPRWLQLSRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + F+ D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240


>gi|26990346|ref|NP_745771.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24985304|gb|AAN69235.1|AE016558_5 sulfonate ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 251

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R+++ +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAVTTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P   +  +   L    +  +   +  R+L  ++++LL       L    R L 
Sbjct: 34  GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILIGLLLALLMGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            V  P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AVTTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + F+ D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240


>gi|213971168|ref|ZP_03399286.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382297|ref|ZP_07230715.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302058532|ref|ZP_07250073.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato K40]
 gi|213924037|gb|EEB57614.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 285

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +  A++  IPVGI IG          P  +     P   + PL+V     
Sbjct: 91  GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I      G           A S   T W+  R++I+P   
Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260

Query: 564 CFVLALN---RFLWHPLYLY 580
               A+    R L   L  +
Sbjct: 261 IIAFAMELGLRALQRKLVPW 280



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    +  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|220903849|ref|YP_002479161.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868148|gb|ACL48483.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 277

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 30/227 (13%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  +     I++ RV     IA+ + +P+GI +G++P +++ +  F  L  + P   + P
Sbjct: 54  MGTLPANTLISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAWVP 113

Query: 436 LVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           LV++      L                N  + +  ++  G  + IL + I G    P   
Sbjct: 114 LVLAWFGMLSLADVFSVPIGAAYPYFHNIKVSMIFIIFIGGFYPILTSAIHGVGMVPQTL 173

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A          +R ++LP   P  V G     G +W   + +E+          +G+
Sbjct: 174 TDAARVLGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEMLPG-----SLSGV 228

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPL 577
           G  I  +   G    V+ G++ +      L+R         F+W  L
Sbjct: 229 GYLITHAYTVGRTDVVIAGMISIGVVGALLDRLFRFYEDRKFVWKRL 275



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 17/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           + + +LP     +  R+ +   I+         +      +   L   L + +SIP L +
Sbjct: 52  ISMGTLPANTLISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAW 111

Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163
           +   + +F  L    V    + A            IF IF    + +  S    +  +P+
Sbjct: 112 VPLVLAWFGMLSLADVFSVPIGAAYPYFHNIKVSMIFIIFIGGFYPILTSAIHGVGMVPQ 171

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L + +R         F  + +P++ P +V  + + +   W  +V++EM+        L 
Sbjct: 172 TLTDAARVLGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEMLPG-----SLS 226

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G  I  A        ++  M+++  V  L D+L 
Sbjct: 227 GVGYLITHAYTVGRTDVVIAGMISIGVVGALLDRLF 262


>gi|221215496|ref|ZP_03588460.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221164680|gb|EED97162.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 291

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 10/234 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +   + W   +  V               +       +      ++ RV+     A++  
Sbjct: 52  WQAAVHWRLSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ IG    +   + P  ++L   PA  + PL +       L+    +  +   G  
Sbjct: 112 VGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N + GA A        A S    G+  +  +ILPG  P   TG     G AW   
Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCL 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +E+ +  +      G+G +   S    ++P++V+G+ ++    +  +  +  
Sbjct: 228 VTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+    + +          
Sbjct: 60  LSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTGVGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|222444461|ref|ZP_03606976.1| hypothetical protein METSMIALI_00072 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350985|ref|ZP_05976402.1| ABC transporter, permease protein [Methanobrevibacter smithii DSM
           2374]
 gi|222434026|gb|EEE41191.1| hypothetical protein METSMIALI_00072 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860324|gb|EFC92622.1| ABC transporter, permease protein [Methanobrevibacter smithii DSM
           2374]
          Length = 246

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+F+V   +I+AS++ IP+GI +G+   + +       +L   P   + P  +       
Sbjct: 60  TLFKVFGGMILASVVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGT 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  G  + IL   I G         E A +           +ILP   P 
Sbjct: 120 A----PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPP 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+G     G A   +I +E+         ++GLG  I  +T        V+G+L++   
Sbjct: 176 IVSGLKVGVGIALMCTISAEMIG------SSSGLGYLILTATNLFDTGTTVVGMLVIGLI 229

Query: 566 VLALNRFL 573
            L L+   
Sbjct: 230 GLILDYVF 237



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     +    L      T  ++   M+++ +       L     +L  +  
Sbjct: 34  LPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASVVAIPLGILLGWYSKLETLCS 93

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ I++ IP + ++ F++++F              AIF IF   V+ +       +   
Sbjct: 94  FVISILRPIPPIAWIPFSILWFGIG--------TAPAIFIIFIGCVFPILIYTIDGVKRT 145

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L E +++           + +P ++P +V  + + +       +++EMI        
Sbjct: 146 DKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSS---- 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    D    +  ML +  +  + D + 
Sbjct: 202 --GLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVF 237


>gi|154246028|ref|YP_001416986.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154160113|gb|ABS67329.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 319

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 13/203 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  R+ +   +A+++ +P+G+ +G    I   + P  ++L   PA  + P+ +      
Sbjct: 127 ISCRRIFLGFALAALVAVPMGLLMGRYALIKEFVFPVCEVLRPIPAIAWVPMSIML---- 182

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  +   G  + IL N + G +         A     +    +  +  P + P
Sbjct: 183 WPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAVLP 242

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G AW + I +E+ S         G+G +  E+     +P++ LG++ +  
Sbjct: 243 QIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYPDIALGMITIGV 296

Query: 565 FVLA---LNRFLWHPLYLYGTRC 584
             LA   L R +   +  +    
Sbjct: 297 LGLASSFLIRLVGRAVTPWSRAK 319



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 82/236 (34%), Gaps = 17/236 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L         P  +++         +   +   +  R+     ++ L       L  +  
Sbjct: 95  LYVRFLNVPSPEQVLESARTAFSTGTFFDHIVISCRRIFLGFALAALVAVPMGLLMGRYA 154

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   + P+ ++++ IP + ++  +++ +           E + +F  F    + +  + 
Sbjct: 155 LIKEFVFPVCEVLRPIPAIAWVPMSIMLW--------PTNEQSIVFITFLGAFFPILLNT 206

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              + N+   L   +R    S    F  +  P  +P +   + + M   W  ++A+EMI 
Sbjct: 207 LHGMANVDEVLVRAARCLGASERATFLEVYFPAVLPQIFTGLTVGMGVAWVSLIAAEMIS 266

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267
                    GIG +   A        I   M+T+  +        +L+ R +  WS
Sbjct: 267 G------QFGIGYFTWEAYSLVQYPDIALGMITIGVLGLASSFLIRLVGRAVTPWS 316


>gi|327481588|gb|AEA84898.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 301

 Score =  132 bits (333), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 78/201 (38%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +    A ++ +  G+ IG        + P+ +L    PA  + PL +  +    
Sbjct: 107 SLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAILMLPTEQ 166

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +   G  + I+ N + G    P+     A S   +      ++++PG  P 
Sbjct: 167 SS----IVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILWHVVIPGAMPS 222

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G     G AW + +  E+ S  +      G+G +   S     +PE+++G+L +   
Sbjct: 223 IVAGLAIGMGVAWFSLLAGEIISGQY------GIGYFTWTSYTLVKYPEIIIGMLTIGGL 276

Query: 566 VLALNRFLWH---PLYLYGTR 583
                  +     PL  +  +
Sbjct: 277 GTLCTLLVRKACVPLLRWQQQ 297



 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 104/270 (38%), Gaps = 21/270 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINI----LLHGIQETTVPRDIVDIVPITLDVHSL 61
              P ++ R    +  LLA VL+  +       L    +    P  +   +   L     
Sbjct: 41  RRLPPMAGRYLVRVLALLAAVLIWHLATATGFNLFINFENVPAPLLVGQTLIQQLGSSEF 100

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             +   +  R+  A   +++   +   L  +SR    +L+P +++ + IP + ++   ++
Sbjct: 101 YLHIVHSLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAIL 160

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                    +   + + +F  F    + +  +    +   P  L   +RS   S     W
Sbjct: 161 --------MLPTEQSSIVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILW 212

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P +MP +V  + + M   WF ++A E+I          GIG +   +        I
Sbjct: 213 HVVIPGAMPSIVAGLAIGMGVAWFSLLAGEIISG------QYGIGYFTWTSYTLVKYPEI 266

Query: 242 LYAMLTMLGVIFLYDQLLFR---PMIVWSN 268
           +  MLT+ G+  L   L+ +   P++ W  
Sbjct: 267 IIGMLTIGGLGTLCTLLVRKACVPLLRWQQ 296


>gi|241896063|ref|ZP_04783359.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241870711|gb|EER74462.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane/binding protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 576

 Score =  132 bits (333), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V   I   L   ++   P     I  I ++   L      T   ++ + +IS++  
Sbjct: 56  WLFIVGVTIFAALMFGKKWGFPLFTF-IGLIIVENQGLWTSMMNTFTLVIISSLISVIIG 114

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA  
Sbjct: 115 VPLGIWMAKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFFG---IGVVPGVFASVIFA-- 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +  +P DL E + SF  +G QK + + +P +   +   +  ++   
Sbjct: 170 ---LPPTVRMANLGIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLA 226

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A+++ D+       ++++ +  + D+L
Sbjct: 227 LSMVVVASMI-------GAPGLGRGVLAAVQDADIGKGFVNGISLVILAIVIDRL 274



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   L I    +   +  G  W    +        +   +      T   V++  +I+ I
Sbjct: 53  IPTWLFIVGVTIFAALMFGKKWGFPLFTFIGLIIVENQGLWTSMMNTFTLVIISSLISVI 112

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+     ++  +QP    +   PA V+    V+      +       +     
Sbjct: 113 IGVPLGIWMAKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFFGIGVVPGVFASVIF---- 168

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    PND  E A SF  TG +    I LP       +G       A +
Sbjct: 169 ALPPTVRMANLGIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLALS 228

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +V+ +           GLG  +  + +     +  +  + +    + ++R 
Sbjct: 229 MVVVASMIG-------APGLGRGVLAAVQDADIGKGFVNGISLVILAIVIDRL 274


>gi|114765802|ref|ZP_01444895.1| taurine ABC transporter, permease protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541801|gb|EAU44838.1| taurine ABC transporter, permease protein [Roseovarius sp.
           HTCC2601]
          Length = 421

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+      ++I IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     +G S         A S   +  +  R++I+P   P 
Sbjct: 290 TGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKAQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++      V++G++++   
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIGVI 399

Query: 566 VLALNRFLWHPLYLYGTRCL 585
              ++  +      +  + L
Sbjct: 400 GFGIDILM-----RFAEKAL 414



 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+++      L           S        PI++ M+ +P L  +  
Sbjct: 221 STLWEHLGWSLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++      GK        I  +F + +W M  +    +  +       + S   S  Q
Sbjct: 281 VIIWAGIGETGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKAQ 332

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP S+P +     ++M   W  VVA+E++          G G  I +A K Q  
Sbjct: 333 IMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 386

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++  ++ +  + F  D L+    + ++ W  +
Sbjct: 387 DIVIMGIILIGVIGFGIDILMRFAEKALVPWKGR 420


>gi|22126005|ref|NP_669428.1| inner membrane permease for ABC transporter [Yersinia pestis KIM
           10]
 gi|45441867|ref|NP_993406.1| putative transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51596533|ref|YP_070724.1| ABC taurine/sulfonate transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108807630|ref|YP_651546.1| putative transport system permease [Yersinia pestis Antiqua]
 gi|108811909|ref|YP_647676.1| transport system permease [Yersinia pestis Nepal516]
 gi|145598157|ref|YP_001162233.1| transport system permease [Yersinia pestis Pestoides F]
 gi|149365800|ref|ZP_01887835.1| putative transport system permease [Yersinia pestis CA88-4125]
 gi|153949819|ref|YP_001400823.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|165927246|ref|ZP_02223078.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938542|ref|ZP_02227098.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010611|ref|ZP_02231509.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166210486|ref|ZP_02236521.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400827|ref|ZP_02306333.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167424872|ref|ZP_02316625.1| ABC transporter , permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466995|ref|ZP_02331699.1| ABC transporter , permease protein [Yersinia pestis FV-1]
 gi|170024194|ref|YP_001720699.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186895593|ref|YP_001872705.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|218929379|ref|YP_002347254.1| putative transport system permease [Yersinia pestis CO92]
 gi|229837803|ref|ZP_04457962.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229894962|ref|ZP_04510140.1| putative transport system permease [Yersinia pestis Pestoides A]
 gi|229898364|ref|ZP_04513511.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902209|ref|ZP_04517330.1| putative transport system permease [Yersinia pestis Nepal516]
 gi|270490685|ref|ZP_06207759.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|21958952|gb|AAM85679.1|AE013814_7 putative inner membrane permease for ABC transporter [Yersinia
           pestis KIM 10]
 gi|45436729|gb|AAS62283.1| putative transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51589815|emb|CAH21447.1| putative ABC taurine/sulfonate transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775557|gb|ABG18076.1| transport system permease [Yersinia pestis Nepal516]
 gi|108779543|gb|ABG13601.1| putative transport system permease [Yersinia pestis Antiqua]
 gi|115347990|emb|CAL20915.1| putative transport system permease [Yersinia pestis CO92]
 gi|145209853|gb|ABP39260.1| transport system permease [Yersinia pestis Pestoides F]
 gi|149292213|gb|EDM42287.1| putative transport system permease [Yersinia pestis CA88-4125]
 gi|152961314|gb|ABS48775.1| ABC transporter , permease protein [Yersinia pseudotuberculosis IP
           31758]
 gi|165913416|gb|EDR32037.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920914|gb|EDR38162.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990313|gb|EDR42614.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207666|gb|EDR52146.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167049680|gb|EDR61088.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167056059|gb|EDR65837.1| ABC transporter , permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750728|gb|ACA68246.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186698619|gb|ACC89248.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229681105|gb|EEO77200.1| putative transport system permease [Yersinia pestis Nepal516]
 gi|229688654|gb|EEO80723.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694169|gb|EEO84216.1| putative transport system permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702057|gb|EEO90078.1| putative transport system permease [Yersinia pestis Pestoides A]
 gi|262362187|gb|ACY58908.1| putative transport system permease [Yersinia pestis D106004]
 gi|262365521|gb|ACY62078.1| putative transport system permease [Yersinia pestis D182038]
 gi|270339189|gb|EFA49966.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|320014943|gb|ADV98514.1| putative transport system permease [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 273

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     ++     +++RV++  +I +++ +P+G+W+G     +  + P  Q L   P 
Sbjct: 65  LMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPP 124

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + IL N IAG       +   A +     
Sbjct: 125 IAYIPLAMLWFGLG----NPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R IILP   PY +TG     G A+   IV+E+ +        +G+G  I E+ E  
Sbjct: 181 ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYM 234

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +V+ G+  +    L ++
Sbjct: 235 WSDKVIAGMFTIGFLGLVID 254



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A  +  R++   +I  L           S+    ++ P++  ++ IP + ++  
Sbjct: 71  GELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPL 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + N+       +R+       
Sbjct: 131 AMLWFGLGNPP--------AFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQAT 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++  M + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 183 MFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNS------GVGYRILEAREYMWS 236

Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
             ++  M T+  +  + D     L R ++ W 
Sbjct: 237 DKVIAGMFTIGFLGLVIDLCMDRLNRRLLRWH 268


>gi|144898341|emb|CAM75205.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Magnetospirillum gryphiswaldense MSR-1]
          Length = 172

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             +S+     L PI  +++++P L +L  ++  F    P        +AIF IF + VW 
Sbjct: 8   IGQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFKAADP--------SAIFVIFITSVWP 59

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    + NIP+D   V+   RLS  + F  + +P S+P +   + + +   W  +VA
Sbjct: 60  IILNTAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVA 119

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +EM++ G       GIG +I  A     +  I+ A++ +  V F  D+L+
Sbjct: 120 AEMLIGGV------GIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163



 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 10/166 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG        + P  Q+L   P   + P+ ++       +       ++   + W I+ N
Sbjct: 8   IGQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFKAADPS----AIFVIFITSVWPIILN 63

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G    P D++ VA+   ++   ++  I +P   PY  TG     G +W A + +E+ 
Sbjct: 64  TAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAAEML 123

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G       G+G +I ++       E++L ++ +     AL+R +
Sbjct: 124 IGG------VGIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163


>gi|298693438|gb|ADI96660.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED133]
 gi|323440153|gb|EGA97867.1| ABC transporter permease [Staphylococcus aureus O11]
 gi|323443616|gb|EGB01230.1| ABC transporter permease [Staphylococcus aureus O46]
          Length = 253

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F     I+FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLYLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +    + Q+ + +  R ++  V++L+       L  ++R L   + 
Sbjct: 37  LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIE 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++ I  + +  F V++F            L AI  IF +  + + F+  + + +I
Sbjct: 97  PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +++ +  L+GW  +  +  P +   ++  + M++   W F+V+ EMI        
Sbjct: 149 EPQYLKIAANLYLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    +L  +L A+  +    F+ D+ +
Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240


>gi|75674870|ref|YP_317291.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419740|gb|ABA03939.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 275

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 112/279 (40%), Gaps = 17/279 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L++   +  R + +           L +   +S  L  +++  +  +   + + ++   +
Sbjct: 2   LTDAPAEPRRIVSLPNGFRSAALSVLIAAASLSAGLLFWYWATLTSLDFYVRFDNVPTPI 61

Query: 369 N--HFTYQDVL--YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
              +  + ++      +    ++ R+ +   +AS + I +G+ +G      + I P+ ++
Sbjct: 62  QVANAFWHELGDKRFYFHILYSLRRIAIAYALASALGIGLGLAVGRSRLARAVILPYVEI 121

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA  + PL +        +    +  +   G  + IL N I G    P      A 
Sbjct: 122 IRPIPAVAWIPLAILMWPTEESS----IIYITALGAMFPILLNTIHGVEQTPEILVRAAQ 177

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   +    +++++LP   P+ VTG     G +W + +  E+ S  +      G+G +  
Sbjct: 178 SLGASRLAIFQHVVLPSALPHIVTGLAIGMGVSWFSLLAGEIISGQY------GIGYFTW 231

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +     +PE+V+G++++     A     R L  PL  +
Sbjct: 232 NAYSLILYPEIVVGMIVIGLLGTASTHAVRLLTRPLLAW 270



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
                     P  + +     L       +   +  R+  A  ++            +SR
Sbjct: 50  FYVRFDNVPTPIQVANAFWHELGDKRFYFHILYSLRRIAIAYALASALGIGLGLAVGRSR 109

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V++P ++I++ IP + ++   ++ +           E + I+      ++ +  + 
Sbjct: 110 LARAVILPYVEIIRPIPAVAWIPLAILMW--------PTEESSIIYITALGAMFPILLNT 161

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +   P  L   ++S   S    F ++ +P ++P +V  + + M   WF ++A E+I 
Sbjct: 162 IHGVEQTPEILVRAAQSLGASRLAIFQHVVLPSALPHIVTGLAIGMGVSWFSLLAGEIIS 221

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267
                    GIG +   A        I+  M+ +  +        +LL RP++ W 
Sbjct: 222 G------QYGIGYFTWNAYSLILYPEIVVGMIVIGLLGTASTHAVRLLTRPLLAWQ 271


>gi|256811246|ref|YP_003128615.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
 gi|256794446|gb|ACV25115.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
          Length = 256

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 18/212 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    I++ RV+   ++AS++ IP+GI +G    +++      ++L   P   + PL
Sbjct: 54  GSLIGNTIISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAWVPL 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++      ++    + +   F     IL N I+G    P    E A +    G      
Sbjct: 114 SLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKGVPTPLIEAALTLGAKGKDILIK 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +TG     G AW   + +E+           GLG  I  +        V+
Sbjct: 170 VVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMYAYSLSRMDVVI 224

Query: 557 LGVLIMCCFVLALNR---------FLWHPLYL 579
             ++I+    L L+R         F+W  +  
Sbjct: 225 ACMIIIGLIGLVLDRGLRYIEDKYFVWRKMMK 256



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL      +  R+LS  +++ +       L    R +      ++++++ IP L +
Sbjct: 51  LGTGSLIGNTIISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAW 110

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  ++ +F           E++ IF IF    + +  +    +  +P  L E + +    
Sbjct: 111 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAK 162

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G      + +P S P ++  + +     W  VVA+EM+   +      G+G  I  A   
Sbjct: 163 GKDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 217

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++  M+ +  +  + D+ L
Sbjct: 218 SRMDVVIACMIIIGLIGLVLDRGL 241


>gi|148642351|ref|YP_001272864.1| nitrate/sulfonate/bicarbonate ABC transporter, permease component,
           TauC [Methanobrevibacter smithii ATCC 35061]
 gi|148551368|gb|ABQ86496.1| nitrate/sulfonate/bicarbonate ABC transporter, permease component,
           TauC [Methanobrevibacter smithii ATCC 35061]
          Length = 246

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+F+V   +I+ASI+ IP+GI +G+   + +       +L   P   + P  +       
Sbjct: 60  TLFKVFGGMILASIVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGT 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  G  + IL   I G         E A +           +ILP   P 
Sbjct: 120 A----PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPP 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+G     G A   +I +E+         ++GLG  I  +T        V+G+L++   
Sbjct: 176 IVSGLKVGVGIALMCTISAEMIG------SSSGLGYLILTATNLFDTGTTVVGMLVIGLI 229

Query: 566 VLALNRFL 573
            L L+   
Sbjct: 230 GLILDYVF 237



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     +    L      T  ++   M+++ +       L     +L  +  
Sbjct: 34  LPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASIVAIPLGILLGWYSKLETLCS 93

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ I++ IP + ++ F++++F              AIF IF   V+ +       +   
Sbjct: 94  FVISILRPIPPIAWIPFSILWFGIG--------TAPAIFIIFIGCVFPILIYTIDGVKRT 145

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L E +++           + +P ++P +V  + + +       +++EMI        
Sbjct: 146 DKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSS---- 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    D    +  ML +  +  + D + 
Sbjct: 202 --GLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVF 237


>gi|307132314|ref|YP_003884330.1| glycine betaine ABC transporter membrane protein [Dickeya dadantii
           3937]
 gi|306529843|gb|ADM99773.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 406

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           L      + I+   L   Q ++    +  ++  + +        A  T   +L+A+   +
Sbjct: 150 LTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALFFCV 209

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 210 IIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTIIF 266

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E ++SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 267 A-----LPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTL 321

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 322 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 86/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   V   +AWQ   + +   T   ++ +  +G      +T+  V+  +   
Sbjct: 149 LLTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALFFC 208

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+      +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 209 VIIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGIG----NVPGVVVTI 264

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 265 IFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 324

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 325 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372


>gi|258424287|ref|ZP_05687168.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
 gi|257845553|gb|EEV69586.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
          Length = 253

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++R V   ++A ++ IP+G  +G    + + I+P  QL+       + P 
Sbjct: 54  GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV       L     + +   F       FN I G       + ++A++ ++TGW  +R 
Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFPIA----FNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ PG F   + G   A G +W   +  E+          +GLG  I ++    +  +V+
Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223

Query: 557 LGVLIMCCFVLALNRFL 573
             +  +  F   ++RF+
Sbjct: 224 AAIFFIGLFGFIIDRFI 240



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +    + Q+ + +  R ++  V++LL       L  ++R L   + 
Sbjct: 37  LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  +++ I  + +  F V++F            L AI  IF +  + + F+  + + +I
Sbjct: 97  PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIAFNTIKGVRDI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                +++ +  L+GW  +  +  P +   ++  + M++   W F+V+ EMI        
Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    +L  +L A+  +    F+ D+ +
Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240


>gi|222054757|ref|YP_002537119.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564046|gb|ACM20018.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 263

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV+    IA+++ + +GI IG    +        Q++   P   + PL +     
Sbjct: 67  GISVLRVLEGFGIAALLGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAILWFGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++  G  + ++ N I G     + F EVA    +   ++   +++PG  
Sbjct: 127 GEQSK----VYIIFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKFIGQMVIPGAL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG       AW   + +E+ +       ++G+G  I ++ +      V++G++ + 
Sbjct: 183 PAIMTGIRIGLMVAWMCVVAAELIA------ASSGIGYLIMDARQLSQSDVVLVGMITIG 236

Query: 564 CFVLALNRFLWH 575
                ++  L  
Sbjct: 237 VIGKLMDSVLKR 248



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 97/252 (38%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A ++V   +  L +        P  I       L    + ++   + LR+L    I+ L
Sbjct: 23  VAILVVWQALFQLGYIKPIILPPPSRIALTFLDLLKSGEMAKHLGISVLRVLEGFGIAAL 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SR L  +   ++ +++ IP + ++   +++F           E + ++ 
Sbjct: 83  LGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAILWFGIG--------EQSKVYI 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF    + +  +    +        EV+R   +   +    + +P ++P ++  + + + 
Sbjct: 135 IFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKFIGQMVIPGALPAIMTGIRIGLM 194

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  VVA+E+I          GIG  I  A +      +L  M+T+  +  L D +L R
Sbjct: 195 VAWMCVVAAELIAASS------GIGYLIMDARQLSQSDVVLVGMITIGVIGKLMDSVLKR 248

Query: 262 ---PMIVWSNKF 270
               +I W   F
Sbjct: 249 LEKRLISWRISF 260


>gi|269119112|ref|YP_003307289.1| binding-protein-dependent transporters inner membrane component
           [Sebaldella termitidis ATCC 33386]
 gi|268612990|gb|ACZ07358.1| binding-protein-dependent transport systems inner membrane
           component [Sebaldella termitidis ATCC 33386]
          Length = 275

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 10/201 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++ RV+    I  I+ + +G  +G     +         +   P   + PL
Sbjct: 75  GQIFQDVLISLSRVMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPL 134

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+        +      +L+   + + IL N I+G  + P  + EVA  ++   W+ +R 
Sbjct: 135 VILWFGIGETSK----VILIAKASFFPILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQ 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LP   P    G       AW   I +E+ +       T+G+G  I ++        V+
Sbjct: 191 IYLPYALPNIFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVI 244

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
            G++++    + ++R L   L
Sbjct: 245 TGIIVVGLLGVIMDRILDRIL 265



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 101/258 (39%), Gaps = 24/258 (9%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------HSLPQYASRTTLR 71
            IF+ +A  ++I +I  +     E   P  +  I  +   +        + Q    +  R
Sbjct: 29  GIFNYIALPVII-VIFWISATKNELFSPVILPSIAMVFTSLISQISSGQIFQDVLISLSR 87

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++    I L+      TL   S           D ++ IP L ++   +++F      KV
Sbjct: 88  VMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPLVILWFGIGETSKV 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I    A+ F         +  +    + + P+   EV++ +  + W+ F  + +P+++P 
Sbjct: 148 ILIAKASFF--------PILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALPN 199

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + + +S  W  V+A+E+I          GIG  I  A        ++  ++ +  +
Sbjct: 200 IFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVITGIIVVGLL 253

Query: 252 IFLYDQLL---FRPMIVW 266
             + D++L    R +  W
Sbjct: 254 GVIMDRILDRILRELTPW 271


>gi|83590814|ref|YP_430823.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573728|gb|ABC20280.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 266

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 14/210 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            Y++    I++ RV +   IA  I +P+G+ +   P +++ ++PF ++    P   + PL
Sbjct: 63  GYLLKHVLISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRIFGPIPGIAWVPL 122

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +                ++  G+ + +L N   G         E A +     W+    
Sbjct: 123 AILWFGLGDK----AAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSR 178

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP + PY VTG     G AW   I +E+    +      GLG  +      G     +
Sbjct: 179 VILPSLIPYLVTGFRVGLGFAWRVVIAAEMVGVPN------GLGYMLGVGRGTGRTDITI 232

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + ++++   +L +   ++ PL     R  R
Sbjct: 233 ITMVVLGAIMLVVEELIFAPL----ERRTR 258



 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 109/267 (40%), Gaps = 22/267 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILL--------HGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +R++  +  L  F+L+    +I          + +     P  I+  +  TL    L ++
Sbjct: 9   QRLWQGVLALSVFILIWYTASITGLFGRVPRDYSLLLLPPPGKILVTIFETLVSGYLLKH 68

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+     I++          A    +  ++ P + I   IP + ++   +++F 
Sbjct: 69  VLISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRIFGPIPGIAWVPLAILWFG 128

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + AAIF I    V+ +  + YQ + ++ + L E +R+     WQ    + 
Sbjct: 129 LG--------DKAAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSRVI 180

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +P LV    + +   W  V+A+EM+ V +      G+G  + +          +  
Sbjct: 181 LPSLIPYLVTGFRVGLGFAWRVVIAAEMVGVPN------GLGYMLGVGRGTGRTDITIIT 234

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           M+ +  ++ + ++L+F P+   +  +R
Sbjct: 235 MVVLGAIMLVVEELIFAPLERRTRFWR 261


>gi|256393443|ref|YP_003115007.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM
           44928]
 gi|256359669|gb|ACU73166.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 441

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 99/255 (38%), Gaps = 13/255 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R ++P +  +L  V V  ++ +  +    +   P ++   +               +   
Sbjct: 189 RAVYPPVLAILLIVAVWQVLYVAKIWPDWKLPGPSEVFTSLKGAFSSGDAWPSVGHSVEH 248

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                  S+        L  + R +   L PIL  +QS+P + ++   +++F        
Sbjct: 249 GAIGFGASVAIGTPLGLLVGRVRAVRAGLGPILSGLQSLPSVAWVPPALMFF-------- 300

Query: 132 IGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G + A ++A+  +     ++  +   L  +P     V R+    G     Y+ +P ++P
Sbjct: 301 -GPKPAMLYAVVLAGAVPSISVGVVSGLDQVPPLYLRVGRNLGARGLASVRYVLLPAALP 359

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G +  +    +  W  ++A+E+IV    +     +G  +  A    D+     A++ +L 
Sbjct: 360 GYLAGLRQGWAFSWRSLLAAEIIVESADLGHS--LGFLLKNAQDSNDMAGAFAAIVLILA 417

Query: 251 VIFLYDQLLFRPMIV 265
           V    +QL+F P+  
Sbjct: 418 VGVAVNQLVFVPLER 432



 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 86/267 (32%), Gaps = 12/267 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L     H     + +        +  +    V   + +   W           +  +  
Sbjct: 172 ALETSPVHETGWLVAVLRAVYPPVLAILLIVAVWQVLYVAKIWPDWKLPGPSEVFTSLKG 231

Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
               G        ++    +    +  I  P+G+ +G    + + + P    L + P+  
Sbjct: 232 AFSSGDAWPSVGHSVEHGAIGFGASVAIGTPLGLLVGRVRAVRAGLGPILSGLQSLPSVA 291

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P  +             L  +++ G    I   V++G    P  +  V  +    G  
Sbjct: 292 WVPPALMFFG----PKPAMLYAVVLAGAVPSISVGVVSGLDQVPPLYLRVGRNLGARGLA 347

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY++LP   P Y+ G       +W + + +E+         +  LG  +  + +    
Sbjct: 348 SVRYVLLPAALPGYLAGLRQGWAFSWRSLLAAEIIVESADLGHS--LGFLLKNAQDSNDM 405

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYL 579
                 ++++    +A+N+ ++ PL  
Sbjct: 406 AGAFAAIVLILAVGVAVNQLVFVPLER 432


>gi|77459517|ref|YP_349024.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77383520|gb|ABA75033.1| putative integral membrane transport protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 279

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           +L P   RR+      LL  + +  I+ I      +   P +I   +   L   +L ++ 
Sbjct: 20  LLNPLWRRRLKGLALPLLIVIALEFIVRIGWLPSYQMPAPSEIALTLT-DLAEGALWKHI 78

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             + +R+L    I      V+A     SR     L P    ++SIP L ++   +++   
Sbjct: 79  GASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLLLWLGI 138

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E + I  I     + +  ++  ++ NI R L EV   +  S  Q    + +
Sbjct: 139 D--------ETSKIVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGFSPLQLVRRILL 190

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A+
Sbjct: 191 PAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAI 244

Query: 246 LTMLGVIFLYDQLLF---RPMIVWSNKF 270
           + +  +  L D LL    R  +VW + F
Sbjct: 245 IVLALLGKLSDGLLAILERRWLVWRDAF 272



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 92/265 (34%), Gaps = 12/265 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +   +L  +    +        +         +L +     +  +    ++Q        
Sbjct: 4   DLPARLALSAPRRKLPLLNPLWRRRLKGLALPLLIVIALEFIVRIGWLPSYQMPAPSEIA 63

Query: 371 FTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            T  D+           ++ RV++   I + + +    W+G      + ++P    L + 
Sbjct: 64  LTLTDLAEGALWKHIGASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSI 123

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL++  +     +      +L+  G  + +  NV+A          EV   +  
Sbjct: 124 PSLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGF 179

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +  R I+LP   P   TG  +    +W   + +E+ +       T GLG  +++  E
Sbjct: 180 SPLQLVRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRE 233

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 V+  ++++       +  L
Sbjct: 234 TSRPDIVLAAIIVLALLGKLSDGLL 258


>gi|83951958|ref|ZP_00960690.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83836964|gb|EAP76261.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 660

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 90/545 (16%), Positives = 178/545 (32%), Gaps = 52/545 (9%)

Query: 10  FISRRIFPNI--FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           F  +R +PNI      A      ++   L G +       +     +   +      A +
Sbjct: 96  FYGKRRWPNIGPIPWTAIAASAAVLGYYLGGWRFAL----LAGGTFVWTALIGQWDIAMQ 151

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++ A   + +       LA K      ++ PIL ++Q++P   +L   V++F    
Sbjct: 152 TMSVLVVAAPFAFVIGLTLGILAWKFHGFERMIKPILSVLQTLPFFTYLLPAVIFFKV-- 209

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   GA    I+AI       M       L  +  ++ E  +    + WQ    + VP 
Sbjct: 210 -GPTAGAVATIIYAIP-----PMVLMTTLGLKKVSPEVVEAGKMSGCTRWQMLSRVYVPS 263

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +   ++  +          ++    +VV    I +PG+G+ +   +    L       +T
Sbjct: 264 ARTEILVGLNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVT 316

Query: 248 MLGVIFLYDQLL----------FRPMIVWSNKFRLERTTGIYPADSWVLY--------LF 289
           ++ +  + D+L           F     W  +               +L         + 
Sbjct: 317 IVLLAIMLDRLSKAWVVKQPEHFERGTPWWKRHIYLLAGVGGFVLFLLLSQVIEVFAEIG 376

Query: 290 RKTNFLRF--IGYSSWNFFSP-LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
           R+ +F +   I     NF +      V    R    ++   P     L        ++ +
Sbjct: 377 RRQHFSQGKEIDNIIKNFLALEAVRGVTDWLRWFLNVKILIPFRDALLWVPTPAFVLVIV 436

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            +   V G   GI       IV    + D         IT++ V+  +I+A+++ IP+GI
Sbjct: 437 AFAYGVGGRKPGIYAAVFFTIVAFSGWWD------RSVITLYTVISAVILATLLGIPLGI 490

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                   S ++         FP+ ++    +       +     + +  +     Y   
Sbjct: 491 AAARSEKWSKRVLLACDTAQTFPSFIYLIPAIMLFGVNDVAVVFSILIFAMVPLCRY--- 547

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             + G  + P +  E A     T  +  R + LP   P    G   A   A+   I++  
Sbjct: 548 -TVEGLRSVPPEMTESADMSGATRRQKMRSVQLPIALPTMAVGFNQAIIFAFFMVIIAAF 606

Query: 527 ASWGH 531
                
Sbjct: 607 IGTQD 611



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 78/202 (38%), Gaps = 19/202 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++SA++++ L        AA+S +    ++   D  Q+ P   +L   ++ F    
Sbjct: 470 TLYTVISAVILATLLGIPLGIAAARSEKWSKRVLLACDTAQTFPSFIYLIPAIMLFGVN- 528

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  ++A +F+I    +  +     + L ++P ++ E +     +  QK   + +P 
Sbjct: 529 -------DVAVVFSILIFAMVPLCRYTVEGLRSVPPEMTESADMSGATRRQKMRSVQLPI 581

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +      ++   +F V+ +  I   D       +G  +   +   ++       + 
Sbjct: 582 ALPTMAVGFNQAIIFAFFMVIIAAFIGTQD-------LGQELQRTLAGTEMGKNFVLGMN 634

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
           +  +   +D  +      W+ K
Sbjct: 635 VSLMALTFDLAI----SSWAEK 652


>gi|111074973|gb|ABH04834.1| ABC-type transporter permease component [Heliobacillus mobilis]
          Length = 248

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ +   +I+A +  IP+G+ +G++  +   ++P   LL   P  V+ P  ++ +  + 
Sbjct: 57  SIYLLTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTFT 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+       ++  G  W +  N +AG  A      + A +  ++ W     ++LPG  P+
Sbjct: 117 LS----SIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPH 172

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A+     +E+         T+GLG Y+   ++   +P VV G+L++   
Sbjct: 173 ILSGGSISLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILVIGIV 226

Query: 566 VLAL 569
           VL L
Sbjct: 227 VLLL 230



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 80/188 (42%), Gaps = 14/188 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   + S ++++LL       L    RRL   + P+ +++  IP + ++ +T+       
Sbjct: 57  SIYLLTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALL---- 112

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                   L++IF IF    W +  +    +  + + L + +R+  +S W     + +P 
Sbjct: 113 ----PTFTLSSIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPG 168

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++    +S+   +  + A+EMI          G+G Y+       D   ++  +L 
Sbjct: 169 ALPHILSGGSISLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILV 222

Query: 248 MLGVIFLY 255
           +  V+ L 
Sbjct: 223 IGIVVLLL 230


>gi|149912652|ref|ZP_01901186.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b]
 gi|149813058|gb|EDM72884.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b]
          Length = 421

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+V     +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   + W+  RY+I+P   P 
Sbjct: 290 TGK----IILLFLAALWIMTIAARAGVSGVAISKVHAAYSLGASKWQLMRYVIMPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  ++       V++G++++   
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASRFQLTDIVLMGIILIGVI 399

Query: 566 VLALNRFLWH 575
              ++  +  
Sbjct: 400 GYGIDILMRK 409



 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   + +R++       L           S        PI++ M+ +P L  +   
Sbjct: 222 TLWEHLYWSLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++      GK        I  +F + +W MT +    +  +       + S   S WQ 
Sbjct: 282 IIWAGIGETGK--------IILLFLAALWIMTIAARAGVSGVAISKVHAAYSLGASKWQL 333

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             Y+ +P S+P +     ++M   W  VVA+E++          G G  I +A + Q   
Sbjct: 334 MRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASRFQLTD 387

Query: 240 AILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
            +L  ++ +  + +  D L+ +    ++ W  +
Sbjct: 388 IVLMGIILIGVIGYGIDILMRKAEKWLVPWKGR 420


>gi|91774063|ref|YP_566755.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Methanococcoides burtonii DSM 6242]
 gi|91713078|gb|ABE53005.1| ABC transporter permease protein [Methanococcoides burtonii DSM
           6242]
          Length = 262

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 81/210 (38%), Gaps = 10/210 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +       +   +      ++    + I+ A ++ IP+G+ +G+  +++  + P  ++
Sbjct: 45  DVLFAFIKIIEGGILFTDLATSLLHFGIGILFALLVGIPIGVVMGWFKNVNHALDPLIEI 104

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   + P  +      H +       ++  G  + ++ N   G  + P  + E A 
Sbjct: 105 IRPIPPLAWIPFAIVWFGLTHTS----AGFVVFIGAVFPVIINTFDGFKSVPKFYVEAAK 160

Query: 485 SFH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++     R++ LP   P   +G   + G  W   + +E+       + TTGLG  I
Sbjct: 161 VLGCMSSGSLIRHVALPSAMPSIASGIRISMGVGWMCLVAAEMFG-----VSTTGLGYKI 215

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      V++ +LI+    L ++R  
Sbjct: 216 WWHYYLHQMDFVLVYMLILGFLGLFIDRLF 245



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 15/236 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML-SAMVISLLFTF 84
           +++  ++  L+   +        V    I +    +      T+L      ++ +LL   
Sbjct: 23  IVLWQLVADLVVNNKFILPSFTDVLFAFIKIIEGGILFTDLATSLLHFGIGILFALLVGI 82

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +    + +   L P+++I++ IP L ++ F +V+F             +A F +F 
Sbjct: 83  PIGVVMGWFKNVNHALDPLIEIIRPIPPLAWIPFAIVWFGL--------THTSAGFVVFI 134

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFR-LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             V+ +  + +    ++P+   E ++    +S      ++ +P +MP +   + +SM  G
Sbjct: 135 GAVFPVIINTFDGFKSVPKFYVEAAKVLGCMSSGSLIRHVALPSAMPSIASGIRISMGVG 194

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           W  +VA+EM  V  T     G+G  I        +  +L  ML +  +    D+L 
Sbjct: 195 WMCLVAAEMFGVSTT-----GLGYKIWWHYYLHQMDFVLVYMLILGFLGLFIDRLF 245


>gi|171741918|ref|ZP_02917725.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC
           27678]
 gi|283457058|ref|YP_003361622.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|306824033|ref|ZP_07457406.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
 gi|309800758|ref|ZP_07694893.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171277532|gb|EDT45193.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC
           27678]
 gi|283103692|gb|ADB10798.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
 gi|304552686|gb|EFM40600.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
 gi|308222603|gb|EFO78880.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 275

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV     +A++I +P+G+ +G     S+ ++P   L+   P   + PL +  +  
Sbjct: 78  YASLVRVFSGFGLAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPLTLIMIGI 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+     + I+ N +      P    E A+    +  +    ++ P   
Sbjct: 138 GDRS----TIFLVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGKALWKVVFPAAL 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G AW   +V E+         T GLGA I E+        +V G+ I+ 
Sbjct: 194 PGIIGGLRVAVGLAWALLVVGEMTGI------TVGLGAMITEAKNVSKTDLIVAGMFIIG 247

Query: 564 CFVLALNRFL 573
                 +R +
Sbjct: 248 ILGFLSDRLI 257



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 86/201 (42%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   + +R+ S   ++ L       L  +S+    +L P +++++ IP+  ++  
Sbjct: 71  AMLWKHTYASLVRVFSGFGLAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPL 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T++             + + IF +F + ++ +  +   ++  +P  L E +     S  +
Sbjct: 131 TLIMIGIG--------DRSTIFLVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGK 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W +  P ++PG++  + +++   W  +V  EM           G+G+ I  A      
Sbjct: 183 ALWKVVFPAALPGIIGGLRVAVGLAWALLVVGEM------TGITVGLGAMITEAKNVSKT 236

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  M  +  + FL D+L+
Sbjct: 237 DLIVAGMFIIGILGFLSDRLI 257


>gi|260550615|ref|ZP_05824824.1| taurine transporter [Acinetobacter sp. RUH2624]
 gi|260406326|gb|EEW99809.1| taurine transporter [Acinetobacter sp. RUH2624]
          Length = 289

 Score =  131 bits (331), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|163761175|ref|ZP_02168251.1| Binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
 gi|162281514|gb|EDQ31809.1| Binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
          Length = 278

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           +   ++ R++  ++IA  + +PVGI IG    +        Q L       + P+ V   
Sbjct: 84  MTLPSLERIMHGMLIAIALGVPVGILIGRFGFLREITNIPFQFLRMISPLSWMPIAVMAF 143

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           + +       +  L+     W ILF+  AG      D+ +VA +     W     IILP 
Sbjct: 144 ATWDG----AIVFLIAVAAVWPILFSTAAGLRRVEPDWFKVARNLGARPWHMLFTIILPA 199

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I    +TG   A G AW   + +E          T+GLG  I ++ +   +  +   V+I
Sbjct: 200 ISQDILTGIRLALGVAWIVLVPAEYLGI------TSGLGYAINDARDTLEYDRLAATVVI 253

Query: 562 MCCFVLALN 570
           +      L+
Sbjct: 254 IGVIGFTLD 262



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P   +  +   +           +  R++  M+I++        L  +   L  +    
Sbjct: 64  APGPALTRLAEMVASGEAWAMTLPSLERIMHGMLIAIALGVPVGILIGRFGFLREITNIP 123

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              ++ I  L ++   V+ F             A +F I  + VW + FS    L  +  
Sbjct: 124 FQFLRMISPLSWMPIAVMAFATWDG--------AIVFLIAVAAVWPILFSTAAGLRRVEP 175

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D  +V+R+     W   + + +P     ++  + +++   W  +V +E + +        
Sbjct: 176 DWFKVARNLGARPWHMLFTIILPAISQDILTGIRLALGVAWIVLVPAEYLGI------TS 229

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G+G  I  A    +   +   ++ +  + F  D +
Sbjct: 230 GLGYAINDARDTLEYDRLAATVVIIGVIGFTLDFI 264


>gi|126699086|ref|YP_001087983.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile 630]
 gi|255100508|ref|ZP_05329485.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-63q42]
 gi|115250523|emb|CAJ68347.1| ABC-type transport system, sulfonates-family permease [Clostridium
           difficile]
          Length = 256

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 99/249 (39%), Gaps = 16/249 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----- 385
             +    +   Y + +    +   V +   W S             + +I+ G I     
Sbjct: 1   MFEKIHKRLKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVY 60

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+++      
Sbjct: 61  ASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++I  + + I  N + G     N   EV  SF+++  R +  II+P    
Sbjct: 121 EESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSML 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V G     G ++ A I +E+ +       ++GLG  I++  +      V++G+ ++  
Sbjct: 177 DIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGF 230

Query: 565 FVLALNRFL 573
             +  +   
Sbjct: 231 LGILSDYLF 239



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 100/247 (40%), Gaps = 15/247 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  +++  I+ +L         P + ++D     +   S+      +  R+L   +IS 
Sbjct: 15  FLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISS 74

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L   ++++     P+ + M+S P L  +   +++F      K+I   LA+ F
Sbjct: 75  LMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFF 134

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF         +  + + N    L EV +SF LS  + F+ + +P SM  +V  + + +
Sbjct: 135 PIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSMLDIVVGLSLGL 186

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              +  ++ +E+I          G+G  I+          +L  +  +  +  L D L  
Sbjct: 187 GYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS 240

Query: 261 RPMIVWS 267
           + +  +S
Sbjct: 241 KIITKFS 247


>gi|302132199|ref|ZP_07258189.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 285

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +  A++  IPVGI IG          P  +     P   + PL+V     
Sbjct: 91  GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFSRPIPPLAYLPLIVIWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I      G           A S   T W+  R++I+P   
Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260

Query: 564 CFVLALN---RFLWHPLYLY 580
               A+    R L   L  +
Sbjct: 261 IIAFAMELGLRALQRKLVPW 280



 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    +  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFSRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|254455396|ref|ZP_05068825.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082398|gb|EDZ59824.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 717

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 86/540 (15%), Positives = 179/540 (33%), Gaps = 67/540 (12%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + +T   +L A  +S +F       A KS+R+   L PIL +MQ++P    L   +V F 
Sbjct: 200 SMQTLSFILVAAPLSFIFGLGLGIAAYKSKRVEKALYPILLVMQTMPQYAVLVPALVLFG 259

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + AA+       V  M       L  IP ++ E  R    + WQ    + 
Sbjct: 260 VG--------DHAAVIITMVVAVPPMILLTILGLRAIPPEVIEAGRMSGCTNWQLMVKVL 311

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +          ++    + V    I   G+G  + LA+ + ++   L A
Sbjct: 312 IPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLALNQLNIGLALEA 364

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI------ 298
            L +  +  L D++     + W+NK         +   +  +  F  +  +  I      
Sbjct: 365 GLCISLIAILLDKMS----LAWANKQTDYFGNLTFFQRNKNVIFFVASFVIGIILAYVGT 420

Query: 299 -----------------GYSSWNFFSPLSNNVK-------KLCRTLGVIRFHFPENFLQL 334
                            G S+ +F++   + +        K   T  +     P   L L
Sbjct: 421 FIFKGSFNYLFEIPHNKGISTADFWNKGVDWIFDTFFVYIKAFNTWLIQDVLQPMRALYL 480

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
                 + +L +    ++ G+   +    +   +    + D         +T +     +
Sbjct: 481 RMPAVATLVLVVGAGYIIGGIRSALVVCGLTLFIALSPWWD------RALVTFYMATFGV 534

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+ +I   VG         ++ +     +   FP+ V+   V+        +  + + +
Sbjct: 535 VISCLIGFSVGTLCFQNKKSAAFMLGVCDIFQTFPSFVYLIPVMMLFGITDTSVLIAVIV 594

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                   Y     I G  + P    E A+   +  ++    I  P  FP+ + G     
Sbjct: 595 YATIPATRY----TIEGLRSVPIGLHEAATMSGVNKFQRLTKIEFPLAFPHMMLGLNQTI 650

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLALNRFL 573
             A    I+               LG YI ++    +   + L + + +    L  +  +
Sbjct: 651 VFALFMVIIGAFIGTED-------LGQYILKALSDKNGAGIGLTLGICVAFIGLIFDNLI 703



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 81/207 (39%), Gaps = 18/207 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L        A  T       +VIS L  F   TL  ++++    ++ + DI Q+ P  
Sbjct: 514 IALSPW--WDRALVTFYMATFGVVISCLIGFSVGTLCFQNKKSAAFMLGVCDIFQTFPSF 571

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   ++ F           + + + A+        T    + L ++P  L E +    
Sbjct: 572 VYLIPVMMLFGI--------TDTSVLIAVIVYATIPATRYTIEGLRSVPIGLHEAATMSG 623

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q+   +  P + P ++  +  ++    F V+    I   D       +G YI  A+
Sbjct: 624 VNKFQRLTKIEFPLAFPHMMLGLNQTIVFALFMVIIGAFIGTED-------LGQYILKAL 676

Query: 234 KEQDLLAILYAM-LTMLGVIFLYDQLL 259
            +++   I   + + +  +  ++D L+
Sbjct: 677 SDKNGAGIGLTLGICVAFIGLIFDNLI 703


>gi|296132128|ref|YP_003639375.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296030706|gb|ADG81474.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 277

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 101/268 (37%), Gaps = 14/268 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +L  IR     ++    +      +L I+               +   ++  F       
Sbjct: 17  SLTRIRADVGRSWYMTGALSSFVGLLFIWALLSYGEYVNSTFLPTPSRVLAVFVQMLQSP 76

Query: 379 VIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +W    I+++RV +  ++A++I IP+GI  G      + IQP  + +   PA  F PLV
Sbjct: 77  NLWSDIGISVYRVTMGFLLAAVIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLV 136

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +               L++  GT + ++  V       P D    + +   T ++    +
Sbjct: 137 MVWAGIGEG----AKILVIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRV 192

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P + P  +       G AW   +V+E+ +        +GLG  I ++        + +
Sbjct: 193 LIPAMMPNLMDTLRLMIGWAWTYLVVAELVA------ANSGLGYSILKAQRFLKTDVIFV 246

Query: 558 GVLIMCCFVLALNRFLW---HPLYLYGT 582
           G+L++    L  +R        L+ +  
Sbjct: 247 GILVIGILGLLTDRLFAFANKKLFPWAE 274



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 93/251 (37%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +  + +  +++   +        P  ++ +    L   +L      +  R+    +++ 
Sbjct: 38  FVGLLFIWALLSYGEYVNSTFLPTPSRVLAVFVQMLQSPNLWSDIGISVYRVTMGFLLAA 97

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       LA   +     + P+ + ++ +P   F+   +V+            E A I 
Sbjct: 98  VIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLVMVWAGIG--------EGAKIL 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + M   +  ++  +P DL   S +   + +Q    + +P  MP L+  + + +
Sbjct: 150 VIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRVLIPAMMPNLMDTLRLMI 209

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W ++V +E++          G+G  I  A +      I   +L +  +  L D+L  
Sbjct: 210 GWAWTYLVVAELVAANS------GLGYSILKAQRFLKTDVIFVGILVIGILGLLTDRLFA 263

Query: 261 ---RPMIVWSN 268
              + +  W+ 
Sbjct: 264 FANKKLFPWAE 274


>gi|158424127|ref|YP_001525419.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331016|dbj|BAF88501.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 289

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 20/281 (7%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
               +      G +          +   Q       +F   +     +  AW +  +   
Sbjct: 17  RRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPTPDRVWNAWVTWAFGPK 76

Query: 370 HFTY-QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                      +     +  RV     +A ++ +P+GI IG+    +  + P  Q L   
Sbjct: 77  GMGLNPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPV 136

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + P+ ++         +     L+  G  + I+ N   G      ++   A     
Sbjct: 137 PITAWLPISIAIFGIS----DFGSIFLITIGAFYPIVINTTHGTRDVEKNWIRAALMMGS 192

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +     R ++LP   P   TG     G AW A IVSE+ +        +GLG  + ++  
Sbjct: 193 SPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVA------VKSGLGYVLWDAYY 246

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYLY 580
            G    V+  ++ +       +  +         W  L  +
Sbjct: 247 VGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSF 287



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 14/200 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + +T+R+     +++L            +   MV+ P +  ++ +PI  +L  ++ 
Sbjct: 88  LESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPVPITAWLPISIA 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F          ++  +IF I     + +  +      ++ ++    +     S      
Sbjct: 148 IFGI--------SDFGSIFLITIGAFYPIVINTTHGTRDVEKNWIRAALMMGSSPLTVMR 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +   + + +   W  V+ SEM+ V        G+G  +  A     +  +
Sbjct: 200 RVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIV 253

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           +  M+++  + +L D L+ R
Sbjct: 254 IADMVSIGLLGYLSDVLIVR 273


>gi|167422071|ref|ZP_02313824.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|166958883|gb|EDR55904.1| ABC transporter , permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
          Length = 259

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     ++     +++RV++  +I +++ +P+G+W+G     +  + P  Q L   P 
Sbjct: 51  LMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPP 110

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + IL N IAG       +   A +     
Sbjct: 111 IAYIPLAMLWFGLG----NPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ 166

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R IILP   PY +TG     G A+   IV+E+ +        +G+G  I E+ E  
Sbjct: 167 ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYM 220

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +V+ G+  +    L ++
Sbjct: 221 WSDKVIAGMFTIGFLGLVID 240



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A  +  R++   +I  L           S+    ++ P++  ++ IP + ++  
Sbjct: 57  GELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPL 116

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + N+       +R+       
Sbjct: 117 AMLWFGLGNPP--------AFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQAT 168

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++  M + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 169 MFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNS------GVGYRILEAREYMWS 222

Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
             ++  M T+  +  + D     L R ++ W 
Sbjct: 223 DKVIAGMFTIGFLGLVIDLCMDRLNRRLLRWH 254


>gi|83589331|ref|YP_429340.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83572245|gb|ABC18797.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 262

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ FRV    ++A+ I +P+GI +G    + +  +P        PA+ F PL +  +S 
Sbjct: 68  GISFFRVTTGFLLAAAIGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +          ++  G  + ++  V+      P D  + A +        +R +ILP   
Sbjct: 128 FETQK----IGVVFIGIFFQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     A G AW   IV+E+ +       ++GLG  I  +  + S P++ +G+L + 
Sbjct: 184 PGIMDTLRVALGWAWTYVIVAELVA------ASSGLGFLIMNAGRQLSTPDMFVGILTIG 237

Query: 564 CFVLALN---RFLWHPLYLYGTR 583
              +  +   + L+  L+ +  R
Sbjct: 238 VLGIICDMSFKVLYRWLFPWTER 260



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 97/251 (38%), Gaps = 17/251 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L   +   + H       P   V    + L  + L      +  R+ +  +++  
Sbjct: 24  FVLLLLAWQLGVTVGHLPPTHLPPPGAVARAAVELAGNGLINDIGISFFRVTTGFLLAAA 83

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L    + +     P+L   + +P   F+  T+++            E   I  
Sbjct: 84  IGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSIF--------ETQKIGV 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F    + +   +     N+P+DL + + +      + F  + +P ++PG++  + +++ 
Sbjct: 136 VFIGIFFQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAALPGIMDTLRVALG 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W +V+ +E++          G+G  I  A ++     +   +LT+  +  + D   ++
Sbjct: 196 WAWTYVIVAELVAASS------GLGFLIMNAGRQLSTPDMFVGILTIGVLGIICDMSFKV 249

Query: 259 LFRPMIVWSNK 269
           L+R +  W+ +
Sbjct: 250 LYRWLFPWTER 260


>gi|325121890|gb|ADY81413.1| taurine transporter subunit [Acinetobacter calcoaceticus PHEA-2]
          Length = 289

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|33321797|gb|AAQ06631.1| osmoprotectant transport protein OusBW [Erwinia chrysanthemi]
          Length = 406

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           L      + I+   L   Q ++    +  ++  + +        A  T   +L+A+   +
Sbjct: 150 LTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALSFCV 209

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 210 IIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTIIF 266

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E ++SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 267 A-----LPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTL 321

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 322 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 86/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   V   +AWQ   + +   T   ++ +  +G      +T+  V+  +   
Sbjct: 149 LLTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALSFC 208

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+      +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 209 VIIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGIG----NVPGVVVTI 264

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 265 IFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 324

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 325 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372


>gi|222109084|ref|YP_002551350.1| ABC transporter permease protein (nitrate/sulfonates)
           [Agrobacterium radiobacter K84]
 gi|221728006|gb|ACM31056.1| ABC transporter permease protein (nitrate/sulfonates)
           [Agrobacterium radiobacter K84]
          Length = 313

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV+    IA+++ + +GI +G    ++       Q+L   P   + PL +     
Sbjct: 117 AVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWFGI 176

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      +++ G  + IL + +         + E+A    +    + R +++PG  
Sbjct: 177 G----EEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGAL 232

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G       +W   + +E+ +       ++G+G  I +     +   V+ G++ + 
Sbjct: 233 PQIMSGLRLGITMSWMCVVAAELIA------ASSGIGFLIMDGRVMSNASVVLAGMITLG 286

Query: 564 CFVLALN---RFLWHPLYLY 580
                 +   RF    L  +
Sbjct: 287 VLGKLTDDALRFAERRLVRW 306



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV  +        L ++ + ++ R+L    I+ +       +      L  +  
Sbjct: 93  LPAPSTIVRTIWNMTLSGELAEHVAVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLAD 152

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ +++ IP + ++  ++++F           E A IF I     + +  S   ++   
Sbjct: 153 LMVQVLKPIPPIAWIPLSILWFGIG--------EEAKIFIIVLGAFFPILVSTLDAVHQT 204

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R   +        + +P ++P ++  + + ++  W  VVA+E+I        
Sbjct: 205 DVRYVELARVLEVPRLNFIRQVMIPGALPQIMSGLRLGITMSWMCVVAAELIAASS---- 260

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             GIG  I       +   +L  M+T+  +  L D   +   R ++ W   F 
Sbjct: 261 --GIGFLIMDGRVMSNASVVLAGMITLGVLGKLTDDALRFAERRLVRWRAGFS 311


>gi|159027354|emb|CAO90540.1| srpM [Microcystis aeruginosa PCC 7806]
          Length = 256

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +  RV+V +++AS I +P+G+ IG    + S +    Q         + PL
Sbjct: 59  GEIMPHILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +    L     +  L+     W IL N  AG +A    +  +A S   T       
Sbjct: 119 AVMVLGIGDL----PVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQ 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILP I  + +TG   A G  W   + +E+       + + GLG YI ++ ++ ++ E++
Sbjct: 175 IILPAILSHLLTGFRLAIGIIWIVLVQAEML------VVSAGLGYYILDTRDRLAYSELM 228

Query: 557 LGVLIMCCFVLALN 570
             +L++      L+
Sbjct: 229 AVILVIGAIGYLLD 242



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 82/249 (32%), Gaps = 17/249 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTL 70
           R    ++ +   +L+  +    L                   L       +  +   +  
Sbjct: 11  RALLPLWGMGFGLLLWWLFTSPLWHSNPILNDFSPERSFVALLRPFVGGEIMPHILTSCR 70

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++  +V++         L    R L   L  +      I  L ++   V+         
Sbjct: 71  RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPLAVMVLGIG---- 126

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +L   F +  + +W +  +    +  + R    ++ S   +  +  + + +P  + 
Sbjct: 127 ----DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILS 182

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+    +++   W  +V +EM+VV        G+G YI           ++  +L +  
Sbjct: 183 HLLTGFRLAIGIIWIVLVQAEMLVVSA------GLGYYILDTRDRLAYSELMAVILVIGA 236

Query: 251 VIFLYDQLL 259
           + +L D  L
Sbjct: 237 IGYLLDWGL 245


>gi|307945113|ref|ZP_07660449.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4]
 gi|307770986|gb|EFO30211.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4]
          Length = 420

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++ S+I IP+G  +G    +     P  + +   P     PLV+     + 
Sbjct: 229 SLLRVIGGFLLGSLIGIPLGYAMGLSSWVRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 288

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     W +     AG S         A S   +  +   +II+P   P 
Sbjct: 289 TGK----IALLFLAALWIMTIAARAGVSGVNITKVHAAYSLGASKTQILWHIIVPNSLPE 344

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TGA  A G  W   + +E+ +         G G  I  +++      V++G++++   
Sbjct: 345 IFTGARVAMGVCWGTVVAAELVA------AQKGAGMMIIAASKFQLTDIVLMGIILIGIV 398

Query: 566 VLALNRFLWHPLYLYGTRCL 585
             +++  +         R L
Sbjct: 399 GYSIDILM-----RMAERLL 413



 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 86/213 (40%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   + LR++   ++  L           S  +     PI++ M+ +P L  +   
Sbjct: 221 TLWEHLGSSLLRVIGGFLLGSLIGIPLGYAMGLSSWVRGWFDPIVEFMRPVPPLALIPLV 280

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   S  Q 
Sbjct: 281 IIWFGIWETGK--------IALLFLAALWIMTIAARAGVSGVNITKVHAAYSLGASKTQI 332

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W++ VP S+P +     ++M   W  VVA+E++          G G  I  A K Q   
Sbjct: 333 LWHIIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AQKGAGMMIIAASKFQLTD 386

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +L  ++ +  V +  D L+    R ++ W  +
Sbjct: 387 IVLMGIILIGIVGYSIDILMRMAERLLVPWKGR 419


>gi|224367910|ref|YP_002602073.1| ABC-type transporter, membrane spanning protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223690626|gb|ACN13909.1| ABC-type transporter, membrane spanning protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 300

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 26/257 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLI 394
               L   W  +   +   +    +  +     +       +  +     +++ RVV+  
Sbjct: 36  APIFLIFLWLVLASRIDNQVILPGVWEVGTLLFHPTQDMIGMGSLASNVLVSLVRVVMGY 95

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------- 446
            IA  I +P+G+ +G+          F  L    P   + PLV++      L        
Sbjct: 96  SIAGAIAVPLGVVMGYYGLAFRFFNGFLSLFRPIPPLAWVPLVMAWFGIASLATLTGVET 155

Query: 447 --------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   N    +  ++  G  + IL   I G         + A     +  + +R I+
Sbjct: 156 GKSFIYLNNIKFSMLFIIFIGAFYPILTATIHGVRNVSVTLIDSARVLGASENQIFRKIL 215

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  +TG     G AW   + +E+          +G+G  I  +    S   V+ G
Sbjct: 216 IPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGIGYMITHAFTLASTDIVIAG 270

Query: 559 VLIMCCFVLALNRFLWH 575
           ++ +      ++    H
Sbjct: 271 MISIGVVGGLMDMVFRH 287



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 17/210 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      + +R++    I+         +              L + + IP L ++  
Sbjct: 78  GSLASNVLVSLVRVVMGYSIAGAIAVPLGVVMGYYGLAFRFFNGFLSLFRPIPPLAWVPL 137

Query: 119 TVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            + +F       + G E               +F IF    + +  +    + N+   L 
Sbjct: 138 VMAWFGIASLATLTGVETGKSFIYLNNIKFSMLFIIFIGAFYPILTATIHGVRNVSVTLI 197

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + +R    S  Q F  + +P +MP ++  M + +   W  +V++EM+        L GIG
Sbjct: 198 DSARVLGASENQIFRKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGIG 252

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             I  A        ++  M+++  V  L D
Sbjct: 253 YMITHAFTLASTDIVIAGMISIGVVGGLMD 282


>gi|304398693|ref|ZP_07380565.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304353904|gb|EFM18279.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 363

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q  T    I  +V  I +        A  T   +L+A++  +
Sbjct: 109 LLGMPAPVAILVFALIAWQIATPAMGIATLVSLIAIGAIGAWSQAMVTLALVLTALMFCI 168

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 169 LIGLPLGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 225

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E S SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 226 A-----LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 280

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 281 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 331



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 89/281 (31%), Gaps = 26/281 (9%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T  + ++       F  +   V  +      +    P       +   +     I W   
Sbjct: 77  TTGIDWVVNHFRPLFQGIRVPVDYILSAFQQLLLGMP-------APVAILVFALIAWQIA 129

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
              + I      I            +       +T+  V+  ++   +I +P+GIW+   
Sbjct: 130 TPAMGIATLVSLIAI--------GAIGAWSQAMVTLALVLTALMFCILIGLPLGIWLARS 181

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              +  ++P    +   PA V+   +V          N+   ++ I      I+   I G
Sbjct: 182 ERAARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILG 237

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P D  E + SF  +  +    + LP   P  + G       A +  +++ + + G 
Sbjct: 238 IKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG- 296

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +     +       +G + +    + L+R 
Sbjct: 297 ------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 331


>gi|239827957|ref|YP_002950581.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. WCH70]
 gi|239808250|gb|ACS25315.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. WCH70]
          Length = 281

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 92/276 (33%), Gaps = 19/276 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG------IAWQSIGYI 367
            +            P    +          L IF  C+   V I       +    I  +
Sbjct: 8   ARQPLLRKEWERRIPAFGNKKIKKWMTQAALPIFIICLWQLVGITGEVSKTVLPTPIDIV 67

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              +       +     +++FR     ++ + I I  GI +GF       I P  Q+L  
Sbjct: 68  QAAYQLTISGELFTHLKVSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVIDPTVQMLRT 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL +    +   +      LL+  G  + +  N   G         +VA   H
Sbjct: 128 IPHLAVAPLFILWFGFGETSK----ILLIAKGAFFPVYVNTFLGIRGVDAKLFDVARILH 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W     +I+P   P  ++G   + G AW   +V+E+         T G+G  + ++ 
Sbjct: 184 FSRWEKITLLIIPSALPTILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDAR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +  +   V +G+++        +   R L   L  +
Sbjct: 238 QFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRW 273



 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 90/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DIV           L  +   +  R  +  ++      +       S +   V+ 
Sbjct: 60  LPTPIDIVQAAYQLTISGELFTHLKVSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVID 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++++IP L      +++F      K++     A F ++         + +  +  +
Sbjct: 120 PTVQMLRTIPHLAVAPLFILWFGFGETSKILLIAKGAFFPVYV--------NTFLGIRGV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S W+K   L +P ++P ++  + +S+   W  +V +E++        
Sbjct: 172 DAKLFDVARILHFSRWEKITLLIIPSALPTILSGIRLSLGAAWLGLVVAELMG------S 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG  +  A +  +   +   ++    V  L D L   L + ++ W + ++
Sbjct: 226 TEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRWQDTYK 278


>gi|317494363|ref|ZP_07952777.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917613|gb|EFV38958.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 282

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 101/286 (35%), Gaps = 23/286 (8%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            + + +K   R +           +++ SN  VS    +    V   V        +   
Sbjct: 2   SIHSTLKNDTREVANKVAVSRGRKVRVPSNVVVSAFTLLVILAVWWAVTALHLISPLFLP 61

Query: 368 VNHFTYQDVLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                 +  + +   G            ++ R+++ ++ A +I +PVGI +G  P +   
Sbjct: 62  APQQVLKQWVSISTQGFMDATLGQHLAASLSRILIALLAAVVIGVPVGIAMGLNPTVRGI 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  ++    P   + PL++        +      LL+       +     AG  +   
Sbjct: 122 LDPIIEIYRPVPPLAYLPLMIIWFGIGETSK----ILLIYLAIFAPVTLAAAAGVRSVEQ 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                A +   + W+   Y++LP   P  +TG     G  W+  + +E+ +       T 
Sbjct: 178 VRVRAAQALGASRWQVLWYVVLPNALPEILTGLRIGLGVGWSTLVAAELIA------ATR 231

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           GLG  I  + E  +   V+ G+ ++     AL    R L   L  +
Sbjct: 232 GLGFMIQSAGEFLATDVVIAGISVIAFIAFALELGLRALQRRLTPW 277



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 103/253 (40%), Gaps = 21/253 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP----RDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           L+   +   +  + L        P    +  V I        +L Q+ + +  R+L A++
Sbjct: 40  LVILAVWWAVTALHLISPLFLPAPQQVLKQWVSISTQGFMDATLGQHLAASLSRILIALL 99

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            +++           +  +  +L PI++I + +P L +L   +++F           E +
Sbjct: 100 AAVVIGVPVGIAMGLNPTVRGILDPIIEIYRPVPPLAYLPLMIIWFGIG--------ETS 151

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +T +    + ++ +     +++   S WQ  WY+ +P ++P ++  + 
Sbjct: 152 KILLIYLAIFAPVTLAAAAGVRSVEQVRVRAAQALGASRWQVLWYVVLPNALPEILTGLR 211

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  I  A +      ++  +  +  + F  + 
Sbjct: 212 IGLGVGWSTLVAAELIA------ATRGLGFMIQSAGEFLATDVVIAGISVIAFIAFALEL 265

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 266 GLRALQRRLTPWH 278


>gi|251788501|ref|YP_003003222.1| glycine betaine transporter membrane protein [Dickeya zeae Ech1591]
 gi|247537122|gb|ACT05743.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 400

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+A+   ++         A S R   V+ P+LD MQ+ P   +L   V+ F 
Sbjct: 188 AMVTLALVLTALFFCIILGLPLGIWLAHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFG 247

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P DL E ++SF  S  Q  + + 
Sbjct: 248 ---IGNVPGVVVTIIFA-----LPPIVRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQ 299

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 300 LPLAMPTIMAGINQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVG 352

Query: 245 MLTMLGVIFLYDQL 258
            ++++ +  + D+L
Sbjct: 353 GVSIVILAIILDRL 366



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V       +AWQ   + +   T   ++ +  +G      +T+  V+  +   
Sbjct: 143 LLTSLPAPVAILAFSLLAWQVSSFGMGVATLLSLVIIGAIGAWSQAMVTLALVLTALFFC 202

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I+ +P+GIW+      +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 203 IILGLPLGIWLAHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 258

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 259 IFALPPIVRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 318

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVSIVILAIILDRL 366


>gi|159161960|ref|NP_396576.3| ABC transporter, membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium tumefaciens str. C58]
 gi|15163531|gb|AAK91017.1| ABC transporter, membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium tumefaciens str. C58]
          Length = 313

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV+    IA+++ + +GI +G    ++       Q+L   P   + PL +     
Sbjct: 117 AVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWFGI 176

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      +++ G  + IL + +         + E+A    +    + R +++PG  
Sbjct: 177 G----EEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGAL 232

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G       +W   + +E+ +       ++G+G  I +     +   V+ G++ + 
Sbjct: 233 PQIMSGLRLGITMSWMCVVAAELIA------ASSGIGFLIMDGRVMSNASVVLAGMITLG 286

Query: 564 CFVLALN---RFLWHPLYLY 580
                 +   RF    L  +
Sbjct: 287 VLGKLTDDALRFAERRLVRW 306



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV  +        L ++ + ++ R+L    I+ +       +      L  +  
Sbjct: 93  LPAPSTIVRTIWNMTLSGELAEHVAVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLAD 152

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ +++ IP + ++  ++++F           E A IF I     + +  S   ++   
Sbjct: 153 LMVQVLKPIPPIAWIPLSILWFGIG--------EEAKIFIIVLGAFFPILVSTLDAVHQT 204

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R   +        + +P ++P ++  + + ++  W  VVA+E+I        
Sbjct: 205 DVRYVELARVLEVPRLNFIRQVMIPGALPQIMSGLRLGITMSWMCVVAAELIAASS---- 260

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             GIG  I       +   +L  M+T+  +  L D   +   R ++ W   F 
Sbjct: 261 --GIGFLIMDGRVMSNASVVLAGMITLGVLGKLTDDALRFAERRLVRWRAGFS 311


>gi|239503534|ref|ZP_04662844.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB900]
          Length = 289

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|169796267|ref|YP_001714060.1| taurine ABC transporter membrane protein [Acinetobacter baumannii
           AYE]
 gi|213156998|ref|YP_002319043.1| taurine transport system permease protein [Acinetobacter baumannii
           AB0057]
 gi|215483722|ref|YP_002325945.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|301345497|ref|ZP_07226238.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB056]
 gi|301594987|ref|ZP_07239995.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB059]
 gi|332855398|ref|ZP_08435854.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332867256|ref|ZP_08437506.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|169149194|emb|CAM87074.1| Taurine transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213056158|gb|ACJ41060.1| taurine transport system permease protein [Acinetobacter baumannii
           AB0057]
 gi|213985797|gb|ACJ56096.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|332727488|gb|EGJ58915.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332734089|gb|EGJ65222.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 289

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|22125122|ref|NP_668545.1| glycine betaine transporter membrane protein [Yersinia pestis KIM
           10]
 gi|45442233|ref|NP_993772.1| glycine betaine transporter membrane protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597275|ref|YP_071466.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808368|ref|YP_652284.1| glycine betaine transporter membrane protein [Yersinia pestis
           Antiqua]
 gi|108811295|ref|YP_647062.1| glycine betaine transporter membrane protein [Yersinia pestis
           Nepal516]
 gi|149365459|ref|ZP_01887494.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CA88-4125]
 gi|153949330|ref|YP_001400041.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|165925220|ref|ZP_02221052.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165939926|ref|ZP_02228464.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008318|ref|ZP_02229216.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212363|ref|ZP_02238398.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398795|ref|ZP_02304319.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421456|ref|ZP_02313209.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423494|ref|ZP_02315247.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468718|ref|ZP_02333422.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis FV-1]
 gi|170023360|ref|YP_001719865.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186896379|ref|YP_001873491.1| glycine betaine transporter membrane protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929723|ref|YP_002347598.1| glycine betaine transporter membrane protein [Yersinia pestis CO92]
 gi|229838199|ref|ZP_04458358.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895455|ref|ZP_04510627.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229898689|ref|ZP_04513834.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901540|ref|ZP_04516662.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270489727|ref|ZP_06206801.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504445|ref|YP_003568507.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Z176003]
 gi|21957980|gb|AAM84796.1|AE013725_9 permease of high-affinity ABC transport system for glycine betaine
           and proline [Yersinia pestis KIM 10]
 gi|45437097|gb|AAS62649.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51590557|emb|CAH22198.1| ABC glycine/betaine/L-proline transporter, permease subunit proW
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774943|gb|ABG17462.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Nepal516]
 gi|108780281|gb|ABG14339.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Antiqua]
 gi|115348334|emb|CAL21267.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CO92]
 gi|149291872|gb|EDM41946.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis CA88-4125]
 gi|152960825|gb|ABS48286.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|165912145|gb|EDR30784.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922827|gb|EDR39978.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992700|gb|EDR45001.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206294|gb|EDR50774.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960945|gb|EDR56966.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051299|gb|EDR62707.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057664|gb|EDR67410.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169749894|gb|ACA67412.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186699405|gb|ACC90034.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229681469|gb|EEO77563.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688237|gb|EEO80308.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694565|gb|EEO84612.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701610|gb|EEO89637.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262362564|gb|ACY59285.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis D106004]
 gi|262366431|gb|ACY62988.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis D182038]
 gi|270338231|gb|EFA49008.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354904|gb|ADE65245.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Z176003]
 gi|320016145|gb|ADV99716.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 388

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+      ++  I +        A  T   +L+++   +
Sbjct: 133 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 192

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 193 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 249

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 250 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 304

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 305 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355



 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 95  PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQTLLLGMPAPV-------- 140

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         + +   ++  ++           +    +T+  V+  +    +
Sbjct: 141 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 193

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 194 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 249

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 250 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 309

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 310 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355


>gi|331017063|gb|EGH97119.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 285

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +  A++  IPVGI IG          P  +     P   + PL+V     
Sbjct: 91  GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I      G           A S   T W+  R++I+P   
Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260

Query: 564 CFVLALN---RFLWHPLYLY 580
               A+    R L   L  +
Sbjct: 261 IIAFAMELGLRALQRKLVPW 280



 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  + L          ++R    +  P+++  + IP L +L  
Sbjct: 84  STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281


>gi|299134441|ref|ZP_07027634.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298591188|gb|EFI51390.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 257

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV +  +++++I +P+G+ IG+       I P  ++L   PA  + PL +     
Sbjct: 58  LTSLQRVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFK- 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  L      +    N + G  +    +   A     + W+ +R+I++PG  
Sbjct: 117 ---SSEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSL 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG   + G AW + +  E+ +  +      GLG  I  S    S+P +V+G++ + 
Sbjct: 174 PFVFTGLEISIGLAWFSLVAGEMIAGEY------GLGYVIYTSYTMVSYPTIVIGMITLG 227

Query: 564 CFVLA 568
                
Sbjct: 228 VVGYV 232



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 14/191 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+  A V+S +       +   SR     + P+L++++ IP L ++   ++ F
Sbjct: 56  HILTSLQRVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +        +E   IF  F    +  T +    + +I       +     S WQ F ++
Sbjct: 116 KS--------SEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHI 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP S+P +   + +S+   WF +VA EMI          G+G  I  +        I+ 
Sbjct: 168 VVPGSLPFVFTGLEISIGLAWFSLVAGEMIAG------EYGLGYVIYTSYTMVSYPTIVI 221

Query: 244 AMLTMLGVIFL 254
            M+T+  V ++
Sbjct: 222 GMITLGVVGYV 232


>gi|184157803|ref|YP_001846142.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332876491|ref|ZP_08444258.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209397|gb|ACC56795.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|322508118|gb|ADX03572.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323517692|gb|ADX92073.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332735349|gb|EGJ66409.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 289

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|330820393|ref|YP_004349255.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia gladioli BSR3]
 gi|327372388|gb|AEA63743.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia gladioli BSR3]
          Length = 286

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 20/268 (7%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIGIAWQ 362
           SP +       R+    R                 + L +        +V   +   AWQ
Sbjct: 14  SPAAQGGAVAPRSGAASRLRGALLGAAGLLAALGIWWLAVALLAGHNAMVAQFSPLRAWQ 73

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V          ++     ++ R+   +  A ++ +P G  IG    +   + P  
Sbjct: 74  ALPTLVRDD------QLLTHVATSLRRIAAGLGCALLVGVPAGFAIGRLRWLEHALSPTL 127

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+ V  +          +  L+ F   W ++ +  AG +     + E+
Sbjct: 128 QFLRMISPLSWMPVAVMSLGVGDR----AVIFLLAFAAVWPLILSTAAGVAQLDRRWIEL 183

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S   T      +I +PGI  + +TG   A G  W   + +E+         ++GLG  
Sbjct: 184 GRSLAATRAEMLWHIYVPGIAAHVLTGVRLAIGILWIVLVPAEMIG------VSSGLGYL 237

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I ++ ++ ++ E+   +L++     AL+
Sbjct: 238 ILDTRDRLAYSELAAVILVIGVLGFALD 265



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 17/232 (7%)

Query: 28  VIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +  +   LL G         P      +P  +    L  + + +  R+ + +  +LL   
Sbjct: 48  IWWLAVALLAGHNAMVAQFSPLRAWQALPTLVRDDQLLTHVATSLRRIAAGLGCALLVGV 107

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                  + R L   L P L  ++ I  L ++   V+             + A IF +  
Sbjct: 108 PAGFAIGRLRWLEHALSPTLQFLRMISPLSWMPVAVMSLGVG--------DRAVIFLLAF 159

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           + VW +  S    +  + R   E+ RS   +  +  W++ VP     ++  + +++   W
Sbjct: 160 AAVWPLILSTAAGVAQLDRRWIELGRSLAATRAEMLWHIYVPGIAAHVLTGVRLAIGILW 219

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +V +EMI V        G+G  I           +   +L +  + F  D
Sbjct: 220 IVLVPAEMIGVSS------GLGYLILDTRDRLAYSELAAVILVIGVLGFALD 265


>gi|326332738|ref|ZP_08198999.1| putative glycine betaine ABC transport system integral
           [Nocardioidaceae bacterium Broad-1]
 gi|325949437|gb|EGD41516.1| putative glycine betaine ABC transport system integral
           [Nocardioidaceae bacterium Broad-1]
          Length = 665

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 75/585 (12%), Positives = 182/585 (31%), Gaps = 55/585 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            +S   FP     + ++ V  +   +   I        +V +  ++  +      +    
Sbjct: 102 LVSVPDFPRPVPQIGWLGVTALAAWVALAIAGWRTAV-LVGLSFLSFGMFGYWSDSMDLL 160

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +    A+  S++     A     S+    VL  +LD+MQ++P   +L   V++F      
Sbjct: 161 IVTFVAVAASVIIGLPLAVWVGTSKAANTVLSNLLDLMQTMPTFVYLLPIVLFFGIG--- 217

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                  AA+ A     +  +       + ++P    E + +   +  Q+   + +P + 
Sbjct: 218 -----ASAAVVATLVYALPPIIRIAGYGIRSVPETTIEATDAAGQTAVQRLLKVQLPMAR 272

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             +V  +  ++         +  +         PG+G  +  A+ + ++       + ++
Sbjct: 273 KTIVVGLNQTIMAALSMATIASYVDG-------PGLGKPVLDALVKNNVGNAFVPGMLIV 325

Query: 250 GVIFLYDQLLFRPMIVWSNKFRL------------ERTTGIYPADSWVLYLFRKTN---- 293
            +  + D    R     S +  L                G     + VL    +T     
Sbjct: 326 VMAVMLD----RTTTAASERSELVARGGGGGATLRRAVVGAGALVALVLVYLSRTYGWAA 381

Query: 294 ------FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
                 +  ++     +F   ++         +  +      N +Q    +   ++  + 
Sbjct: 382 EFPATTWGPWLSERVDSFVGWVTATFGGFTEAVKNVTSDLLLNPMQSLLAESPWWLTGVA 441

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              +   V    A  +    +    Y D+ +      IT+   +V  ++  ++ + +G+W
Sbjct: 442 ILALAWIVGGLRASLAAVVCLAGIWYLDLWHD---AMITLNMTLVATLMVMVLALVLGVW 498

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +  R  +   ++P        P  V+   V++          +   +             
Sbjct: 499 MARRRGVDLILRPLLDAGQTIPPFVYLIPVLALFGPTRFTAIVAGIVYAAPAAIKL---- 554

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V  G      +  E + S   T W+    + LP      V  A          +++  + 
Sbjct: 555 VADGVKGVSPNTIEASRSTGATTWQEITKVQLPMARGSLVLAANQGLLYVLAMAVIGGMV 614

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G +      LG   +E   KG         L +    + ++R 
Sbjct: 615 GAGALGYDVV-LGFSRSEEWGKG-----AAAGLTIVLLGIMIDRI 653



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 89/287 (31%), Gaps = 21/287 (7%)

Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
                  +     +   ++      ++ V  L R + V  F  P   +       ++  +
Sbjct: 68  FRDSVLGSRDTNPVIQLTYQLGESFTSAVDWLQRLVSVPDFPRPVPQIGWLGVTALAAWV 127

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +        V +G+++ S G         D+L V            V +  + II +P+
Sbjct: 128 ALAIAGWRTAVLVGLSFLSFGMFGYWSDSMDLLIVT----------FVAVAASVIIGLPL 177

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            +W+G     ++ +     L+   P  V+   +V           +   +         I
Sbjct: 178 AVWVGTSKAANTVLSNLLDLMQTMPTFVYLLPIVLFFGIGASAAVVATLVY----ALPPI 233

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G  + P    E   +   T  +    + LP      V G       A + + ++
Sbjct: 234 IRIAGYGIRSVPETTIEATDAAGQTAVQRLLKVQLPMARKTIVVGLNQTIMAALSMATIA 293

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                        GLG  + ++  K +     +  +++    + L+R
Sbjct: 294 SYVDG-------PGLGKPVLDALVKNNVGNAFVPGMLIVVMAVMLDR 333


>gi|262067155|ref|ZP_06026767.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379113|gb|EFE86631.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 250

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+    I+S++ I +GI++G         Q     +   P   + PL++      
Sbjct: 59  LSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLILTAIRQIPMIAWIPLIILWAGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      ++++F   + I+ N + G  +    + EVA  + ++    +  + LP   P
Sbjct: 119 EVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G +W A + SE+ +       ++G+G  + ++        V++ ++I+  
Sbjct: 175 NIFTGLRLGLGASWMAVVASELIA------SSSGIGYRLNDARSLMRSDVVIVCMIIIGL 228

Query: 565 FVLALNRFL 573
             L +++ +
Sbjct: 229 VGLLMDKLI 237



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L    S +  R+L+   IS +           S +       IL  ++ IP++ +
Sbjct: 48  LKSGQLSNDLSLSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLILTAIRQIPMIAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++            E++ I  I  +  + +  +    + +      EV++ + LS
Sbjct: 108 IPLIILWAGIG--------EVSKIVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F+ + +P ++P +   + + +   W  VVASE+I          GIG  +  A   
Sbjct: 160 KKDTFFKVYLPSALPNIFTGLRLGLGASWMAVVASELIASSS------GIGYRLNDARSL 213

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                ++  M+ +  V  L D+L+
Sbjct: 214 MRSDVVIVCMIIIGLVGLLMDKLI 237


>gi|145598908|ref|YP_001162984.1| glycine betaine transporter membrane protein [Yersinia pestis
           Pestoides F]
 gi|145210604|gb|ABP40011.1| glycine betaine/L-proline transport system permease [Yersinia
           pestis Pestoides F]
          Length = 384

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+      ++  I +        A  T   +L+++   +
Sbjct: 129 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 188

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 189 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 245

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 246 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 300

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 301 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 351



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 91  PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQTLLLGMPAPV-------- 136

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         + +   ++  ++           +    +T+  V+  +    +
Sbjct: 137 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 189

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 190 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 245

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 246 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 305

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 306 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 351


>gi|325276455|ref|ZP_08142220.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324098415|gb|EGB96496.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 251

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R++V +++A +I +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFLLDAL 240



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P+  +  +   L    +  +   +  R+L  ++++LL       L    R L 
Sbjct: 34  GLSARFAPQATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLIGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + FL D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFLLDAL 240


>gi|153955671|ref|YP_001396436.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219856045|ref|YP_002473167.1| hypothetical protein CKR_2702 [Clostridium kluyveri NBRC 12016]
 gi|146348529|gb|EDK35065.1| Predicted ABC transporter, permease protein [Clostridium kluyveri
           DSM 555]
 gi|219569769|dbj|BAH07753.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 260

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 10/193 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +  R+ +   +A  I +  G  IG      + I P   +L   P   + P+ +    
Sbjct: 68  ALYSCIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIFP 127

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +    +  +   G  + IL N IAG  A  +   E A S   + W+  RY+  P  
Sbjct: 128 SVEGS----IIFITFLGAFFPILVNTIAGTQAANSLLIEAAKSMSASKWQLIRYVSFPSA 183

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG     G +W + I +E+ S         G+G Y   S     +PE ++G++ +
Sbjct: 184 VPNIFTGLTIGIGSSWMSVIAAEMISG------KYGIGYYTWTSYTLMQYPETIIGMITI 237

Query: 563 CCFVLALNRFLWH 575
                     +  
Sbjct: 238 GVIGAICFSLVRK 250



 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 21/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL----LHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           ++I   +F +L F++V  ++  L             P D+   +   +      Q+A  +
Sbjct: 12  KKILCKVFSILVFIIVWQLLVNLNIKRPLMFGNLPSPLDVFQTLKTIIIQKEFYQHALYS 71

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +R+     ++L    ++  L   ++     ++PI D+++ IP + ++   ++ F     
Sbjct: 72  CIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIF----- 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + IF  F    + +  +           L E ++S   S WQ   Y+  P +
Sbjct: 127 ---PSVEGSIIFITFLGAFFPILVNTIAGTQAANSLLIEAAKSMSASKWQLIRYVSFPSA 183

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + + +   W  V+A+EMI          GIG Y   +         +  M+T+
Sbjct: 184 VPNIFTGLTIGIGSSWMSVIAAEMISGK------YGIGYYTWTSYTLMQYPETIIGMITI 237

Query: 249 LGVIFL---YDQLLFRPMIVWSN 268
             +  +     + L + ++VW  
Sbjct: 238 GVIGAICFSLVRKLEKIILVWRE 260


>gi|162419458|ref|YP_001607863.1| glycine betaine transporter membrane protein [Yersinia pestis
           Angola]
 gi|162352273|gb|ABX86221.1| glycine betaine/L-proline ABC transporter, permease protein
           [Yersinia pestis Angola]
          Length = 388

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+      ++  I +        A  T   +L+++   +
Sbjct: 133 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 192

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 193 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 249

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 250 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 304

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 305 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 95  PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQALLLGMPAPV-------- 140

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         + +   ++  ++           +    +T+  V+  +    +
Sbjct: 141 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 193

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 194 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 249

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 250 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 309

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 310 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355


>gi|296451763|ref|ZP_06893490.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296880165|ref|ZP_06904132.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
 gi|296259397|gb|EFH06265.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296428890|gb|EFH14770.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
          Length = 256

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLI 394
            Y +      +   V +   W S             + +I+ G I      ++ R+++  
Sbjct: 11  GYYIFFIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGF 70

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S++ IP+G+  G    +    +P  + + + P     P+++        +      +
Sbjct: 71  LISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK----II 126

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I  + + I  N + G     N   EV  SF+++  R +  II+P      V G     
Sbjct: 127 IIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPNSMLDIVVGLSLGL 186

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++ A I +E+ +       ++GLG  I++  +      V++G+ ++    +  +   
Sbjct: 187 GYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLF 239



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 99/247 (40%), Gaps = 15/247 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
               +++  I+ +L         P + ++D     +   S+      +  R+L   +IS 
Sbjct: 15  FFIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISS 74

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       +   ++++     P+ + M+S P L  +   +++F      K+I   LA+ F
Sbjct: 75  LMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFF 134

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF         +  + + N    L EV +SF LS  + F+ + +P SM  +V  + + +
Sbjct: 135 PIF--------LNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPNSMLDIVVGLSLGL 186

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              +  ++ +E+I          G+G  I+          +L  +  +  +  L D L  
Sbjct: 187 GYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS 240

Query: 261 RPMIVWS 267
           + +  +S
Sbjct: 241 KIITKFS 247


>gi|194290581|ref|YP_002006488.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193224416|emb|CAQ70427.1| putative ABC-type transporter, membrane component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 288

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 13/271 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           ++    L  +    P     L  +  V +        +   V        +       T 
Sbjct: 25  RRRHPWLAPLVPVAPNTRWMLGLSFFVLFFGVWAVVTLGGFVPRTFLADPMTMAREGMTL 84

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                 I    +T++RVV   ++A++I +P+GI++G      +  +PF       PA+ F
Sbjct: 85  FTEYNFIGDIGMTVWRVVGGFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAF 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++               L++  G+ + I+  V         D  E A +        
Sbjct: 145 IPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGI 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +++PG  P          G AW   IV+E+         ++G+G  I +S    +  
Sbjct: 201 VRRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTG 254

Query: 554 EVVLGVLIMCCFVLALNRFLWH---PLYLYG 581
           +++ G++++ C  L  +         L+ + 
Sbjct: 255 QIIFGIIVIGCIGLVSDLVFKRANQRLFPWS 285



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 84/247 (34%), Gaps = 18/247 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGI----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  L  FVL  G+  ++  G          P  +          ++       T  R++ 
Sbjct: 44  MLGLSFFVLFFGVWAVVTLGGFVPRTFLADPMTMAREGMTLFTEYNFIGDIGMTVWRVVG 103

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V++ +            +       P +   + +P   F+   +++       K++  
Sbjct: 104 GFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-- 161

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  IF    + +   +  ++    +DL E + +   +       + +P + P +  
Sbjct: 162 ------VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAAPEIAE 215

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +   W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  +
Sbjct: 216 ILRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLV 269

Query: 255 YDQLLFR 261
            D +  R
Sbjct: 270 SDLVFKR 276


>gi|254975037|ref|ZP_05271509.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-66c26]
 gi|255092426|ref|ZP_05321904.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile CIP 107932]
 gi|255314165|ref|ZP_05355748.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-76w55]
 gi|255649944|ref|ZP_05396846.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-37x79]
 gi|260683098|ref|YP_003214383.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile CD196]
 gi|260686696|ref|YP_003217829.1| putative aliphatic sulfonate ABC transporter permease [Clostridium
           difficile R20291]
 gi|260209261|emb|CBA62574.1| putative aliphatic sulfonate ABC transporter, permease protein
           [Clostridium difficile CD196]
 gi|260212712|emb|CBE03807.1| putative aliphatic sulfonate ABC transporter, permease protein
           [Clostridium difficile R20291]
          Length = 256

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLI 394
            Y + +    +   V +   W S             + +I+ G I      ++ R+++  
Sbjct: 11  GYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGF 70

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+S++ IP+G+  G    +    +P  + + + P     P+++        +      +
Sbjct: 71  LISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK----II 126

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I  + + I  N + G     N   EV  SF+++  R +  II+P      V G     
Sbjct: 127 IIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSMLDIVVGLSLGL 186

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G ++ A I +E+ +       ++GLG  I++  +      V++G+ ++    +  +   
Sbjct: 187 GYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLF 239



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 101/257 (39%), Gaps = 14/257 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I +R       L+  +L   +  + +        P  ++D     +   S+      +  
Sbjct: 5   IHKRFKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVR 64

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L   +IS L       +   ++++     P+ + M+S P L  +   +++F      K
Sbjct: 65  RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +I   LA+ F IF         +  + + N    L EV +SF LS  + F+ + +P SM 
Sbjct: 125 IIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSML 176

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +V  + + +   +  ++ +E+I          G+G  I+          +L  +  +  
Sbjct: 177 DIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGF 230

Query: 251 VIFLYDQLLFRPMIVWS 267
           +  L D L  + +  +S
Sbjct: 231 LGILSDYLFSKIITKFS 247


>gi|324994216|gb|EGC26130.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK678]
 gi|325697943|gb|EGD39827.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK160]
          Length = 574

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|324990295|gb|EGC22233.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK353]
          Length = 574

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|21225809|ref|NP_631588.1| ABC-transport protein, membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|289767037|ref|ZP_06526415.1| ABC-transporter [Streptomyces lividans TK24]
 gi|7799280|emb|CAB90902.1| putative ABC-transport protein, membrane component [Streptomyces
           coelicolor A3(2)]
 gi|289697236|gb|EFD64665.1| ABC-transporter [Streptomyces lividans TK24]
          Length = 267

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
               RR  P + + ++  L I +   L     +   P ++VD     +   +L   A  +
Sbjct: 17  SRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLADDALAS 76

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L    +          L      L  ++ P +   ++IP L  +   VV       
Sbjct: 77  LTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVAMGIDET 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +       S +Q + N+ R L   +R         F  + VP S
Sbjct: 137 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPAS 188

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  M + +   W  +VA+E+I          G+G  +  A    DL  I   ++++
Sbjct: 189 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 242

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             +  L D++L    R +  W  +
Sbjct: 243 GILGLLMDRVLLLAERRLTRWQER 266



 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 21/267 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380
           E+  +   + R    L +    V  G+A+  A  S G+ +           T      + 
Sbjct: 11  ESAPERSRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLA 70

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV++   + + + +PVG  +G+   +   I+P+ Q     P     PL V  
Sbjct: 71  DDALASLTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVA 130

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +             ++        + +   G           A          +  +++P
Sbjct: 131 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVP 186

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+ + G     G AW   + +E+ +         GLG  +  +      P + +G++
Sbjct: 187 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 240

Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584
            +    L ++R L      L  +  R 
Sbjct: 241 SIGILGLLMDRVLLLAERRLTRWQERR 267


>gi|325689416|gb|EGD31421.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK115]
          Length = 574

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|294085667|ref|YP_003552427.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665242|gb|ADE40343.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 295

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 84/204 (41%), Gaps = 13/204 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R+ +   IA+ + +P+G+++G+   +     P  +L    P   + PL +  +  +
Sbjct: 97  VSCQRIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILLLPGF 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  L    + +    N + G  +  +D+   A     + W  ++ +++PG  P
Sbjct: 157 EG----PVIFLATLASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALP 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TG   + G AW + + +E+ S         GLG  I ++        +V+G++ +  
Sbjct: 213 FIFTGLQISIGVAWFSLVAAEMVSGDL------GLGYLIVDAYMNNVTVPMVIGMITLGF 266

Query: 565 FVL---ALNRFLWHPLYLYGTRCL 585
                  + R L   L  +  R L
Sbjct: 267 IGYVTSVMVRILGDKLMDWQVREL 290



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   +  R+  A  I+             SR++     P+L++ + IPIL ++  +++ 
Sbjct: 93  EHIRVSCQRIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILL 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                     G E   IF    + ++  T +    + +I  D    +     S W  F  
Sbjct: 153 L--------PGFEGPVIFLATLASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKN 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P +   + +S+   WF +VA+EM+          G+G  I  A      + ++
Sbjct: 205 VVVPGALPFIFTGLQISIGVAWFSLVAAEMVSG------DLGLGYLIVDAYMNNVTVPMV 258

Query: 243 YAMLTMLGVIF---LYDQLLFRPMIVWSNK 269
             M+T+  + +   +  ++L   ++ W  +
Sbjct: 259 IGMITLGFIGYVTSVMVRILGDKLMDWQVR 288


>gi|56695581|ref|YP_165931.1| taurine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
 gi|56677318|gb|AAV93984.1| taurine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
          Length = 290

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRV+      +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 97  GFSLFRVIAGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 156

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     +G S         A S   +  +  RY+I+P   
Sbjct: 157 GETGK----IILLFLAALWIMAIAARSGVSGVRISKVHAAYSLGASKAQIMRYVIVPNSL 212

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +         G G  I  +++      V++G++++ 
Sbjct: 213 PEIFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIG 266

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                ++  +      +  R L
Sbjct: 267 VIGFGIDILM-----RWAERVL 283



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+++      L           S        PI++ M+ +P L  +  
Sbjct: 90  STLWEHLGFSLFRVIAGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++      GK        I  +F + +W M  +    +  +       + S   S  Q
Sbjct: 150 VIIWAGIGETGK--------IILLFLAALWIMAIAARSGVSGVRISKVHAAYSLGASKAQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ VP S+P +     ++M   W  VVA+E++          G G  I +A K Q  
Sbjct: 202 IMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 255

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++  ++ +  + F  D L+    R ++ W +K
Sbjct: 256 DIVIMGIILIGVIGFGIDILMRWAERVLVPWKSK 289


>gi|227822582|ref|YP_002826554.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227341583|gb|ACP25801.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 295

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +V+ +I  +               + P+ +    +   A RT   +    VIS++    
Sbjct: 61  PIVLVVIVAIAWLASRNLRVVAGTMVTPLLIGYFDMWLDAMRTISMIFVCTVISIVVGLP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                ++S RL  ++ P+LD+MQ++P   +L   V+       G++ G     I+A    
Sbjct: 121 IGIAMSRSDRLQRIVSPVLDVMQTMPSFVYLIPVVMLLG---IGRIPGLIAVVIYA---- 173

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M       +  + RD+ E + +F  S WQK   + +P ++P ++  +  ++     
Sbjct: 174 -LPPMIRLTDLGIRLVDRDVLEAADAFGCSKWQKLRNVELPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 88/284 (30%), Gaps = 15/284 (5%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           + F      S   F   + N  +   R  G           +             +   +
Sbjct: 5   SEFPHMNDESLRQFKLSIDNAFRTFTRNYGDFIEGLFAPLSKFLIWAERLMTQTPWPIVL 64

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII----WIPVGIW 407
           V  VAI         +V       +L   +   +   R + +I + ++I     +P+GI 
Sbjct: 65  VVIVAIAWLASRNLRVVAGTMVTPLLIGYFDMWLDAMRTISMIFVCTVISIVVGLPIGIA 124

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     +   + P   ++   P+ V+   VV  +        +   + ++      ++  
Sbjct: 125 MSRSDRLQRIVSPVLDVMQTMPSFVYLIPVVMLLGIGR----IPGLIAVVIYALPPMIRL 180

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G      D  E A +F  + W+  R + LP   P  + G       A    +++ + 
Sbjct: 181 TDLGIRLVDRDVLEAADAFGCSKWQKLRNVELPLALPTIMAGINQTIMMALAMVVIASMI 240

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                     GLG  + ++     F   +   L +    +  +R
Sbjct: 241 G-------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|262278786|ref|ZP_06056571.1| taurine transporter [Acinetobacter calcoaceticus RUH2202]
 gi|262259137|gb|EEY77870.1| taurine transporter [Acinetobacter calcoaceticus RUH2202]
          Length = 289

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 106/260 (40%), Gaps = 20/260 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVH 59
           +   F   R     F  +  V+ I  +   LH + E  +P         + +        
Sbjct: 29  LSSFFEKHRTLAVSFISVGSVVAIWFLITALHVVPELFLPSPQAVWQKFISVSQEGFMKA 88

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L   
Sbjct: 89  TLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLL 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q 
Sbjct: 149 VIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQV 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +     
Sbjct: 201 FWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITD 254

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            ++  ++ +  V   ++  L
Sbjct: 255 TVILGIIVIAIVAVSFELFL 274


>gi|324992122|gb|EGC24044.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK405]
          Length = 574

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|242278151|ref|YP_002990280.1| glycine/betaine ABC transporter permease [Desulfovibrio salexigens
           DSM 2638]
 gi|242121045|gb|ACS78741.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 278

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 91/200 (45%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    T   ++ + +++LLF      LAA ++ +  +++P+LD+MQ++P   +L   
Sbjct: 85  GLWKATVSTIALVIVSTLLALLFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           ++AAIF+     +          +  +P +L E + +F  + WQ+
Sbjct: 145 IPFFGLG--------KVAAIFSTIIFAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQR 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + L +P + P ++  +  ++      VV + MI          G+G  +  AI+   + 
Sbjct: 197 LFKLELPIATPTIMAGVNQTVMLALSMVVIAAMI-------GAKGLGGEVWKAIQRLQMG 249

Query: 240 AILYAMLTMLGVIFLYDQLL 259
               A + ++ V  + D++L
Sbjct: 250 KGFEAGIGIVIVAMIMDRVL 269



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 11/235 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +        +      + +  + ++  + +        + +      T+  V+V  ++A 
Sbjct: 46  KACPPWLFIFIVAAITLRLTKSKRTTIFSIAGLLLIWNIGLWKATVSTIALVIVSTLLAL 105

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  IP+GI      H++  + P   ++   PA V+    +           +      I 
Sbjct: 106 LFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPAIPFFGLG----KVAAIFSTII 161

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                 +     G    P +  E A +F    W+    + LP   P  + G       A 
Sbjct: 162 FAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQRLFKLELPIATPTIMAGVNQTVMLAL 221

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  +++ +           GLG  + ++ ++    +     + +    + ++R L
Sbjct: 222 SMVVIAAMIG-------AKGLGGEVWKAIQRLQMGKGFEAGIGIVIVAMIMDRVL 269


>gi|262281922|ref|ZP_06059691.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262262376|gb|EEY81073.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 574

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIISSAISIVIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|332364432|gb|EGJ42206.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK355]
          Length = 574

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|327459433|gb|EGF05779.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|295839824|ref|ZP_06826757.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. SPB74]
 gi|295827665|gb|EDY44702.2| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. SPB74]
          Length = 1148

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L+ GI+ +L   +   T    ++      L D   L + A  +   ++ A VI+L+   
Sbjct: 49  LLLAGILAVLAFWLLGLTA--GVLSFAGFALIDSLELWEPAMNSFSLVVVATVIALIVGV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA+S+R   ++ P+LD  Q++P + +L   + +F    P        A I A   
Sbjct: 107 PLGIWAARSQRASAIVRPVLDFTQTMPAMVYLIPAIFFFGVGVP--------AGIVATII 158

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +  +  + + +P ++P ++  +   +    
Sbjct: 159 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGINQVIMLNL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + MI  G            +  AI   D+     A ++++ +    D+++
Sbjct: 219 SMVVIAGMIGGGGLGGS-------VYQAIGNVDIGLGSEAGISIVILAIYLDRVV 266



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           +    ++  +A  +   + G +    F   D L +      +   VVV  +IA I+ +P+
Sbjct: 49  LLLAGILAVLAFWLLGLTAGVLSFAGFALIDSLELWEPAMNSFSLVVVATVIALIVGVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW       S+ ++P        PA V+    +  + ++ +     +   +IFG     
Sbjct: 109 GIWAARSQRASAIVRPVLDFTQTMPAMVYL---IPAIFFFGVGVPAGIVATIIFG-FAPA 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G         +  +++
Sbjct: 165 VRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGINQVIMLNLSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   G +          + ++             + +    + L+R +
Sbjct: 225 GMIGGGGLGGS-------VYQAIGNVDIGLGSEAGISIVILAIYLDRVV 266


>gi|153955397|ref|YP_001396162.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219855814|ref|YP_002472936.1| hypothetical protein CKR_2471 [Clostridium kluyveri NBRC 12016]
 gi|146348255|gb|EDK34791.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219569538|dbj|BAH07522.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 205

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ R      +A ++ IP+G+ IG+       I P  Q+     A   FP+
Sbjct: 8   GSLFENVFVSLKRSAAGFALALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPV 67

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +       ++ +G QW IL + I G         + A S   + +  +R 
Sbjct: 68  FILVFGIGETSK----IAIIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFTIFRK 123

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP  FP  +TG   +   A    I +E+         ++GLG  + ++  K   P++ 
Sbjct: 124 VILPSAFPSIITGIRLSATSAILVLIAAEMMG------ASSGLGYLLYDTQVKYQIPKMY 177

Query: 557 LGVLIMCCFVLALNRFL 573
             ++ M    + +N  +
Sbjct: 178 AAIITMSLIGIIVNYTI 194



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 76/198 (38%), Gaps = 14/198 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +    +  R  +   ++LL       +    ++    + P+L I +    L     
Sbjct: 8   GSLFENVFVSLKRSAAGFALALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPV 67

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F           E + I  IF    W +  S  + + N+   L + +RS   S + 
Sbjct: 68  FILVFGIG--------ETSKIAIIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFT 119

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++  + +S +     ++A+EM+          G+G  +     +  +
Sbjct: 120 IFRKVILPSAFPSIITGIRLSATSAILVLIAAEMMGASS------GLGYLLYDTQVKYQI 173

Query: 239 LAILYAMLTMLGVIFLYD 256
             +  A++TM  +  + +
Sbjct: 174 PKMYAAIITMSLIGIIVN 191


>gi|327472840|gb|EGF18267.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK408]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|86361141|ref|YP_473028.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285243|gb|ABC94301.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 295

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++  II ++      +        +  + +    +     RT   +    V+S+     
Sbjct: 61  PIITLIILVIAWFASRSLKIVAGCLVTLMLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S RL  V+ PILD+MQ++P   +L   V+       GKV G     I+AI   
Sbjct: 121 IGILMARSDRLQRVVNPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + +D+ E + +F  S  QK + + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSRAQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q         +L I WF  
Sbjct: 16  RNLKKAIDDGFRGFTRSYGDGIESLFVPLQHFLIAAERFMTQTPWPIITLIILVIAWFAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +     ++  I     + D +        T+  + V  +++  I IP+GI +   
Sbjct: 76  RSLKIVAGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPIGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   + P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 DRLQRVVNPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSRAQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|327459038|gb|EGF05386.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1057]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|325693734|gb|EGD35653.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK150]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|325688426|gb|EGD30444.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK72]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|271964562|ref|YP_003338758.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270507737|gb|ACZ86015.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 280

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 88/248 (35%), Gaps = 13/248 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S +L + ++ V+  + I      +       T      ++     ++ RV+   ++   
Sbjct: 43  GSGLLGLVFWVVLANIGIQGFPGPLEVAERAVTSIGDGTLLGDALASLRRVLTGFVLGVA 102

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +PVG  +G+ P I   I+P+ Q     P     PL +  +             ++   
Sbjct: 103 LAVPVGFLMGWYPVIRGLIEPWLQFFRMVPPLAIIPLAIVLMGI----DETPKIFVIFLA 158

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    + +   G  +  +     A          +  +++P   P+ + G     G +W 
Sbjct: 159 SFLSSVVSTFQGVVSVDSTLINAARVLGAKDRTVFTGVVVPASTPFILVGMRIGLGASWA 218

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +         GLG  + ++      P + + ++++    L ++R L      
Sbjct: 219 TVVAAELIA------AQEGLGYRMQQAQLYYDLPTIFVQLIVIGLIGLIMDRALLLAERR 272

Query: 577 LYLYGTRC 584
           L  +  R 
Sbjct: 273 LTNWQERR 280



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 95/264 (35%), Gaps = 18/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
               R   P         LV  ++ +   GIQ    P ++ +    ++   +L   A  +
Sbjct: 31  SRTRRSTLPLTIGSGLLGLVFWVV-LANIGIQGFPGPLEVAERAVTSIGDGTLLGDALAS 89

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L+  V+ +        L      +  ++ P L   + +P L  +   +V       
Sbjct: 90  LRRVLTGFVLGVALAVPVGFLMGWYPVIRGLIEPWLQFFRMVPPLAIIPLAIVLMGIDET 149

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +   +   S +Q + ++   L   +R         F  + VP S
Sbjct: 150 PK--------IFVIFLASFLSSVVSTFQGVVSVDSTLINAARVLGAKDRTVFTGVVVPAS 201

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  M + +   W  VVA+E+I          G+G  +  A    DL  I   ++ +
Sbjct: 202 TPFILVGMRIGLGASWATVVAAELIA------AQEGLGYRMQQAQLYYDLPTIFVQLIVI 255

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             +  + D+ L    R +  W  +
Sbjct: 256 GLIGLIMDRALLLAERRLTNWQER 279


>gi|268590427|ref|ZP_06124648.1| glycine betaine/L-proline transport system permease protein ProW
           [Providencia rettgeri DSM 1131]
 gi|291314341|gb|EFE54794.1| glycine betaine/L-proline transport system permease protein ProW
           [Providencia rettgeri DSM 1131]
          Length = 391

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           L +    + II   L   Q       +   +  I +        A  T   +L++++  +
Sbjct: 135 LTSLPAPVAIIIFALLTWQLAGRAMGVATFISMIAIGAIGAWSEAMVTLSLVLTSLLFCI 194

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 195 VIGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 251

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 252 A-----LPPIIRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 306

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+ 
Sbjct: 307 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRF 357



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV +                   +P+   +    + L  +          L + Q 
Sbjct: 97  PLDSWVTHAIDWVVLN--FRPVFQGIRAPIDFILSGFEQFLTSLPAPVAIIIFALLTWQL 154

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +  F  +  +    AW                       +T+  V+  ++   +
Sbjct: 155 AGRAMGVATFISMIAIGAIGAWS-------------------EAMVTLSLVLTSLLFCIV 195

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 196 IGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 251

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 252 ALPPIIRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 311

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+RF
Sbjct: 312 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRF 357


>gi|73542404|ref|YP_296924.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119817|gb|AAZ62080.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 284

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 95/261 (36%), Gaps = 10/261 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +   ++    L  +    P     L  +  V +        +   V              
Sbjct: 18  AAPARRRHPWLSPLVPVSPHARWVLGLSFFVLFFAVWALVTLGGFVPRTFLADPATMAHE 77

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             T       I    +T++RV+   ++A+++ +P+GI +G      +  +PF       P
Sbjct: 78  GLTLFAQYNFIGDIGMTVWRVLGGFVLAAVLAVPLGILMGAYKAAEAFFEPFVSFCRYLP 137

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A+ F PL++               L++  G+ + I+  V         D  E A +   +
Sbjct: 138 ASAFIPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGAS 193

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                + +++PG  P          G AW   IV+E+         ++G+G  I +S   
Sbjct: 194 SRGIVKRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQAL 247

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
            +  +++ G++++ C  L  +
Sbjct: 248 LNTGQIIFGIIVIGCIGLVSD 268



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F  V  ++ +     +     P  +          ++       T  R+L   V++ 
Sbjct: 47  FVLFFAVWALVTLGGFVPRTFLADPATMAHEGLTLFAQYNFIGDIGMTVWRVLGGFVLAA 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L    +       P +   + +P   F+   +++       K++        
Sbjct: 107 VLAVPLGILMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  ++    +DL E + +   S       + +P + P +   + + +
Sbjct: 159 VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGASSRGIVKRVLIPGAAPEIAEILRLVL 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D + 
Sbjct: 219 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVF 271


>gi|193077101|gb|ABO11872.2| ABC taurine transporter permease subunit [Acinetobacter baumannii
           ATCC 17978]
          Length = 289

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VASE++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|328945845|gb|EGG39996.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1087]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMSTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|160895595|ref|YP_001561177.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160361179|gb|ABX32792.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 296

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 11/261 (4%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R +  +    P     L     V + L      +   V+       +            
Sbjct: 37  RRRMAPLEPVSPTAKWVLGVAFFVLFFLVWAAVTLGGFVSPTFLASPMTMAREGVLLFTE 96

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
              +    +T++RV+   I+AS++ +P+GI +G    + +  +PF       PA+ F PL
Sbjct: 97  YGFLHDIGMTVWRVMGGFILASVVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPL 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++               L++  G+ + I   V         D  E A +   +     R 
Sbjct: 157 LILWAGVGETQK----LLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRR 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++PG  P          G AW   IV+E+         ++G+G  I +S    +  +++
Sbjct: 213 VLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQII 266

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
            G++++    L  + F++  L
Sbjct: 267 FGIIVIGLIGLVSD-FIFKSL 286



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F LV   + +           P  +     +    +        T  R++   +++ 
Sbjct: 59  FVLFFLVWAAVTLGGFVSPTFLASPMTMAREGVLLFTEYGFLHDIGMTVWRVMGGFILAS 118

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++       K++        
Sbjct: 119 VVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGETQKLL-------- 170

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +T  +  ++    +DL E + +   S       + +P + PG+   + + +
Sbjct: 171 VIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRRVLIPGAAPGIAETLRLVL 230

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D +  
Sbjct: 231 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFIFK 284

Query: 259 -LFRPMIVWS 267
            L R M  WS
Sbjct: 285 SLNRRMFEWS 294


>gi|332358183|gb|EGJ36013.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1056]
          Length = 574

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|319779828|ref|YP_004139304.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317165716|gb|ADV09254.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 295

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+I +   L               +  + +   ++     +T   +L + +I+++    
Sbjct: 61  PLIISLAAGLAWLASRNLTTVAGTVVTLVAIGFLNMWDDTMKTVSMILVSTIIAIVLGAP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                ++S R+  V+ P+LD+MQ++P   +L   V+       GKV G     I+AI   
Sbjct: 121 VGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVVMLLG---IGKVPGVIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + +D+ E + +F  S WQK   + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLRDVQIPLALPTIMAGVNQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     L+  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAINNQYFTLGLFNGLAIVGIAIIFDRI 278



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYI------VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + ++  +A G+AW +   +      V        L +      T+  ++V  IIA ++  
Sbjct: 60  WPLIISLAAGLAWLASRNLTTVAGTVVTLVAIGFLNMWDDTMKTVSMILVSTIIAIVLGA 119

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVGI +     I   I P   ++   P+ V+   VV  +        +   + ++     
Sbjct: 120 PVGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGVIAVVIYAIP 175

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      D  E A +F  + W+  R + +P   P  + G       A    +
Sbjct: 176 PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLRDVQIPLALPTIMAGVNQTIMMALAMVV 235

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  + ++     F   +   L +    +  +R 
Sbjct: 236 IASMIG-------VQGLGQPVLKAINNQYFTLGLFNGLAIVGIAIIFDRI 278


>gi|333028233|ref|ZP_08456297.1| putative glycine betaine ABC transport system permease
           [Streptomyces sp. Tu6071]
 gi|332748085|gb|EGJ78526.1| putative glycine betaine ABC transport system permease
           [Streptomyces sp. Tu6071]
          Length = 1116

 Score =  130 bits (327), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L+ GI+ +L   ++  T    ++  V   L D   L + A  +   ++ A VI+L+   
Sbjct: 15  LLLAGILAVLAFWLRGLTA--GVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGV 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                 A+S+R   V+ P+LD  Q++P + +L   + +F    P        A I A   
Sbjct: 73  PLGIWTARSQRASAVVRPLLDFTQTMPAMVYLIPAIFFFGLGVP--------AGIVATII 124

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +  +    + +P ++P ++  +   +    
Sbjct: 125 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNL 184

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + M+  G            +  AI   D+     A ++++ +    D+++
Sbjct: 185 SMVVIAGMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 232



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                +  V           +++   +   D L +      +   V+V  +IA +I +P+
Sbjct: 15  LLLAGILAVLAFWLRGLTAGVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGVPL 74

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW       S+ ++P        PA V+    +  + ++ L     +   +IFG     
Sbjct: 75  GIWTARSQRASAVVRPLLDFTQTMPAMVYL---IPAIFFFGLGVPAGIVATIIFG-FAPA 130

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G         +  +++
Sbjct: 131 VRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNLSMVVIA 190

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   G +          + ++             + +    + L+R +
Sbjct: 191 GMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 232


>gi|323353440|ref|ZP_08087973.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|322121386|gb|EFX93149.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
          Length = 574

 Score =  130 bits (327), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|313498427|gb|ADR59793.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 251

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R++V +++A ++ +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P   +  +   L    +  +   +  R+L  ++++LL       L    R L 
Sbjct: 34  GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLMGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + F+ D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240


>gi|222081336|ref|YP_002540699.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726015|gb|ACM29104.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 268

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++ RVV+   + + + +P+G+ +G    I   + P  Q L   P   + PL 
Sbjct: 67  ELLGDLLASLQRVVLGFAVGAGLALPLGLLMGTDKTIERYLNPVIQFLRPIPPIAYIPLA 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +          N     L+  G  + +L N I+G     + +   A++        +R +
Sbjct: 127 ILWFGLG----NPPAIFLIAIGAFFPVLINTISGVRNVDSIYVRAATNLGADRLTLFRRV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   PY +TG     G A+   IV+E+ +        +GLG  I E+ E     +V+ 
Sbjct: 183 ILPAATPYILTGMRIGIGTAFIVVIVAEMIA------VNSGLGYRILEAREYMWSDKVIA 236

Query: 558 GVLIMCCFVLALN 570
           G++ +    LA++
Sbjct: 237 GMIAIGLLGLAID 249



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R++    +          L    + +   L P++  ++ IP + ++  
Sbjct: 66  SELLGDLLASLQRVVLGFAVGAGLALPLGLLMGTDKTIERYLNPVIQFLRPIPPIAYIPL 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         AIF I     + +  +    + N+       + +       
Sbjct: 126 AILWFGLGNPP--------AIFLIAIGAFFPVLINTISGVRNVDSIYVRAATNLGADRLT 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++  M + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 178 LFRRVILPAATPYILTGMRIGIGTAFIVVIVAEMIAVNS------GLGYRILEAREYMWS 231

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             ++  M+ +  +    D  + R
Sbjct: 232 DKVIAGMIAIGLLGLAIDIGVNR 254


>gi|27378302|ref|NP_769831.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351449|dbj|BAC48456.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 301

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R+ +   +A+I+ +P+G+ +G    +   I P A++L   PA  + P+ +      
Sbjct: 110 LSCRRIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAIML---- 165

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  +   G+ + IL N + G S         A          +R +  P   P
Sbjct: 166 WPTNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPASLP 225

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TG     G AW + I +E+ S  +      G+G +  E+     + ++ LG++ +  
Sbjct: 226 HIFTGLTVGMGVAWVSLIAAEMISGQY------GIGYFTWEAYSLVQYADIALGMIAIGV 279

Query: 565 FVLALNRFL 573
             L  +  +
Sbjct: 280 LGLGSSLLI 288



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 85/251 (33%), Gaps = 18/251 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           R     I  L+AF+LV  ++     +          P  +       +       +   +
Sbjct: 52  RATAIGIASLIAFLLVWHLLTTYRVVFFVRFTNVPSPLAVYASFTKAIHDPKFLMHIVLS 111

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+     ++ +       +  + + +  ++ P+ ++++ IP + ++   ++ +     
Sbjct: 112 CRRIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAIMLW----- 166

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + +F  F    + +  +    +  +   L   ++         F  +  P S
Sbjct: 167 ---PTNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPAS 223

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + + M   W  ++A+EMI          GIG +   A        I   M+ +
Sbjct: 224 LPHIFTGLTVGMGVAWVSLIAAEMISG------QYGIGYFTWEAYSLVQYADIALGMIAI 277

Query: 249 LGVIFLYDQLL 259
             +      L+
Sbjct: 278 GVLGLGSSLLI 288


>gi|332364733|gb|EGJ42502.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1059]
          Length = 574

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|219870515|ref|YP_002474890.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Haemophilus
           parasuis SH0165]
 gi|219690719|gb|ACL31942.1| ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Haemophilus parasuis SH0165]
          Length = 245

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 94/234 (40%), Gaps = 14/234 (5%)

Query: 344 LDIFWFCVVCGVA----IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           L +FW      +A    I      +  + + +       +      ++ R++V + +A +
Sbjct: 15  LVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWASVQRIIVGLTVALL 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             IP+G+ +G    +     P  Q L       + P+VV  +    L     +  L+ F 
Sbjct: 75  CGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGVGDL----PVYFLIAFA 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W ++ +  +G  +    +  ++ S   +      +II+P I  + +TG   + G AW 
Sbjct: 131 AIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILTGLRVSLGIAWV 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  E+           GLG +I ++ ++ ++ E++  V+++      L+  L
Sbjct: 191 VLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVIGLIGWGLDSLL 238



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 17/252 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASR 67
           + R        L++ VL      +LL    +      P   ++ +        +  +   
Sbjct: 1   MKRNYLYGFTGLISLVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWA 60

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R++  + ++LL           S+ L M   P    ++ I  L ++   V++     
Sbjct: 61  SVQRIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGVG- 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  +L   F I  + +W++  S    + +I      +SRS   S  +   ++ VP 
Sbjct: 120 -------DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPA 172

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++  + +S+   W  +V  EM+ V +      G+G +I           ++ A++ 
Sbjct: 173 ITGHILTGLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIV 226

Query: 248 MLGVIFLYDQLL 259
           +  + +  D LL
Sbjct: 227 IGLIGWGLDSLL 238


>gi|293608377|ref|ZP_06690680.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|299770528|ref|YP_003732554.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
 gi|292828950|gb|EFF87312.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|298700616|gb|ADI91181.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
          Length = 289

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQVFWHVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|332363182|gb|EGJ40967.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK49]
          Length = 574

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|288574240|ref|ZP_06392597.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569981|gb|EFC91538.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 257

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      + FRV+    I++   +P+G  +G  P       P    L   P     P+
Sbjct: 53  GSLARHTGASCFRVLTGFAISTATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPM 112

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      +++I  T + +L N   G  +      EV   F ++  R +  
Sbjct: 113 LILWFGIGEPSK----IVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFME 168

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P  + G       +W + I +E+ +       ++G+G  I ++ +      +V
Sbjct: 169 ILLPSALPSVLVGMRVGLSYSWRSLIGAELIA------ASSGIGYAIHDAEQLSRSDVIV 222

Query: 557 LGVLIMCCFVLALNRFLWH 575
           L V++M       +     
Sbjct: 223 LWVILMGIVGSLSDHAFLR 241



 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 17/255 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F  +   +     +  +        P  ++  +   +   SL ++   +  R+L+   I
Sbjct: 13  LFPAVVLSIWWLGSSTEMWNGYVIPNPGRVLQALQDAVADGSLARHTGASCFRVLTGFAI 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S         +   S     +  P LD ++ IP L  +   +++F    P K        
Sbjct: 73  STATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPMLILWFGIGEPSK-------- 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +  + +  +  + + +  + L EV + F +S  ++F  + +P ++P ++  M +
Sbjct: 125 IVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFMEILLPSALPSVLVGMRV 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  W  ++ +E+I          GIG  I  A +      I+  ++ M  V  L D  
Sbjct: 185 GLSYSWRSLIGAELIAASS------GIGYAIHDAEQLSRSDVIVLWVILMGIVGSLSDHA 238

Query: 259 LFRP---MIVWSNKF 270
             R    +  W   F
Sbjct: 239 FLRLSLKLTPWEGTF 253


>gi|116249179|ref|YP_765020.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253829|emb|CAK12224.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 295

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++  II ++      +        +  + +    +     RT   +    V+S+     
Sbjct: 61  PIITAIILVIAWFASRSLKVVLGCLVTLLLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S RL  ++ PILD+MQ++P   +L   V+       GKV G     I+AI   
Sbjct: 121 MGILMARSDRLQRIINPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + +D+ E + +F  S  QK + + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q       + +L I WF  
Sbjct: 16  RNLKKAIDDGFRAFTRTYGDAIESLFSPLQHFLIAADRFMTQTPWPIITAIILVIAWFAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +     ++  I     + D +        T+  + V  +++  I IP+GI +   
Sbjct: 76  RSLKVVLGCLVTLLLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPMGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 DRLQRIINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +V+ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|113868975|ref|YP_727464.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527751|emb|CAJ94096.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 289

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 105/271 (38%), Gaps = 23/271 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVI 380
           R   P     +       +ML + +F +  G+   +         ++ +  T     +++
Sbjct: 26  RRRHPWLAPLVPVAPNTRWMLGLSFFVLFFGIWAVVTLGGFVPRTFLADPMTMAKEGFIL 85

Query: 381 WL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +          +T++RVV   ++A+++ +P+GI++G      +  +PF       PA+ F
Sbjct: 86  FTEHNFIGDIGMTVWRVVGGFVLAAVLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAF 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++               L++  G+ + I+  V         D  E A +        
Sbjct: 146 IPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGI 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +++PG  P          G AW   IV+E+         ++G+G  I +S    +  
Sbjct: 202 VRRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTG 255

Query: 554 EVVLGVLIMCCFVLALNRFLWH---PLYLYG 581
           +++ G++++ C  L  +         L+ + 
Sbjct: 256 QIIFGIIVIGCIGLVSDLVFKRANQRLFPWS 286



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 82/241 (34%), Gaps = 15/241 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F  +  ++ +     +     P  +     I    H+       T  R++   V++ 
Sbjct: 51  FVLFFGIWAVVTLGGFVPRTFLADPMTMAKEGFILFTEHNFIGDIGMTVWRVVGGFVLAA 110

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            +       P +   + +P   F+   +++       K++        
Sbjct: 111 VLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 162

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  ++    +DL E + +   +       + +P + P +   + + +
Sbjct: 163 VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAAPEIAEILRLVL 222

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D +  
Sbjct: 223 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVFK 276

Query: 261 R 261
           R
Sbjct: 277 R 277


>gi|255306450|ref|ZP_05350621.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile ATCC 43255]
          Length = 229

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 84/197 (42%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+
Sbjct: 26  GSIFLNVYASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPM 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      +++I  + + I  N + G     N   EV  SF+++  R +  
Sbjct: 86  LILWFGIGEESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYK 141

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P      V G     G ++ A I +E+ +       ++GLG  I++  +      V+
Sbjct: 142 IIIPNSMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVL 195

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+ ++    +  +   
Sbjct: 196 VGIFVIGFLGILSDYLF 212



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+L   +IS L       L   ++++     P+ + M+S P L  +   +++F   
Sbjct: 34  ASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 93

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+I   LA+ F IF         +  + + N    L EV +SF LS  + F+ + +P
Sbjct: 94  EESKIIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIP 145

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            SM  +V  + + +   +  ++ +E+I          G+G  I+          +L  + 
Sbjct: 146 NSMLDIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIF 199

Query: 247 TMLGVIFLYDQLLFRPMIVWS 267
            +  +  L D L  + +  +S
Sbjct: 200 VIGFLGILSDYLFSKIITKFS 220


>gi|332531267|ref|ZP_08407180.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332039374|gb|EGI75787.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 257

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 102/264 (38%), Gaps = 13/264 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             ++         L     V +     +F +   V+       +      +        I
Sbjct: 2   APLQPVSARARWLLGLGFFVVFFGVWAFFTLGGYVSSTFLASPLTMAREGWLLFTEFNFI 61

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T++RV+   ++A++I +P+GI +G    + + ++PF       PA+ F PL++  
Sbjct: 62  HDIGMTVWRVLGGFVLAAVIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILW 121

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L       L++  G+ + I+  V     A   D  E A +   +     + +++P
Sbjct: 122 AGIGELQK----VLVIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIP 177

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P          G AW   IV+E+         ++G+G  I +S    +  +++ G++
Sbjct: 178 GAAPEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGII 231

Query: 561 IMCCFVLALN---RFLWHPLYLYG 581
           ++    L  +   + L   L+ + 
Sbjct: 232 VIGLIGLVSDFAFKALNRRLFAWS 255



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 85/250 (34%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F  V     +  +        P  +     +     +       T  R+L   V++ 
Sbjct: 20  FVVFFGVWAFFTLGGYVSSTFLASPLTMAREGWLLFTEFNFIHDIGMTVWRVLGGFVLAA 79

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +   L P +   + +P   F+   +++            EL  + 
Sbjct: 80  VIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGIG--------ELQKVL 131

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +   +  ++    +DL E + +   S       + +P + P +   + + +
Sbjct: 132 VIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIPGAAPEIAETLRLVL 191

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D    
Sbjct: 192 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFAFK 245

Query: 258 LLFRPMIVWS 267
            L R +  WS
Sbjct: 246 ALNRRLFAWS 255


>gi|295111098|emb|CBL27848.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synergistetes bacterium SGP1]
          Length = 278

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 30/239 (12%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +       ++  ++    ++  RV    ++A  + +P+G+ +G+   ++  +   A L 
Sbjct: 45  LLHPTKDLLNMGSLVGNVTVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLF 104

Query: 426 AAFPANVFFPLVVSCVSY----------------YHLNPNLWLSLLMIFGTQWYILFNVI 469
              P   + PLV++                    +  N  + +  ++  G  + IL N I
Sbjct: 105 RPIPPLSWIPLVLAWFGVASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTI 164

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      +       + W+  RY+ILP   P   TG     G AW   + +E+   
Sbjct: 165 GGVQSVRVTLIDAVRVLGASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMPG 224

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYL 579
                  +G+G  I  +        V+ G++ +    + ++            W  LY 
Sbjct: 225 -----SISGVGYLITHAYTVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLYR 278



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 89/231 (38%), Gaps = 20/231 (8%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L++ SL    + + +R+    ++++               L  +L  +  + + IP L +
Sbjct: 53  LNMGSLVGNVTVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLFRPIPPLSW 112

Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163
           +   + +F       ++G E  A            +F IF    + +  +    + ++  
Sbjct: 113 IPLVLAWFGVASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTIGGVQSVRV 172

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L +  R    S WQ   Y+ +P++ P +   + + +   W  +V++EM+        + 
Sbjct: 173 TLIDAVRVLGASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMPG-----SIS 227

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           G+G  I  A        ++  M+ +  +  L D    L+ R    W + +R
Sbjct: 228 GVGYLITHAYTVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLYR 278


>gi|327468560|gb|EGF14039.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK330]
          Length = 574

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|327490635|gb|EGF22416.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1058]
          Length = 574

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  IP +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +          P +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|237740106|ref|ZP_04570587.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|294782809|ref|ZP_06748135.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
 gi|229422123|gb|EEO37170.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|294481450|gb|EFG29225.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
          Length = 250

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+    I+S++ I +GI++G         Q     +   P   + PL++      
Sbjct: 59  LSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLTLTAIRQIPMIAWIPLIILWAGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      ++++F   + I+ N + G  +    + EVA  + ++    +  + LP   P
Sbjct: 119 EVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G +W A + SE+ +       ++G+G  + ++        V++ ++I+  
Sbjct: 175 NIFTGLRLGLGASWMAVVASELIA------SSSGIGYRLNDARSLMRSDVVIVCMIIIGL 228

Query: 565 FVLALNRFL 573
             L +++ +
Sbjct: 229 VGLLMDKLI 237



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L    S +  R+L+   IS +           S +        L  ++ IP++ +
Sbjct: 48  LKSGQLSNDLSLSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLTLTAIRQIPMIAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++            E++ I  I  +  + +  +    + +      EV++ + LS
Sbjct: 108 IPLIILWAGIG--------EVSKIVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F+ + +P ++P +   + + +   W  VVASE+I          GIG  +  A   
Sbjct: 160 KKDTFFKVYLPSALPNIFTGLRLGLGASWMAVVASELIASSS------GIGYRLNDARSL 213

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                ++  M+ +  V  L D+L+
Sbjct: 214 MRSDVVIVCMIIIGLVGLLMDKLI 237


>gi|304397785|ref|ZP_07379661.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304354496|gb|EFM18867.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 275

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 99/269 (36%), Gaps = 19/269 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R  +P +     S   +S +L ++W     G+   +   S   + +            
Sbjct: 13  RRRLRWPFSTTFTLSMLSLSLLLLLWWGVTALGLIAPLFLPSPQQVFSKLLLIASAQGFM 72

Query: 382 LG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++ +  A++I IPVGI +G  P     + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG           A S     W+  R
Sbjct: 133 LMVIWFGIGETSK----ILLISLAIFAPVTLSTLAGVRNTQQVRIRAARSLGANRWQLLR 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 WVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLYG 581
           + G+ ++     +L    R L   L  + 
Sbjct: 243 LAGIAVIAFIAFSLELGLRALQRRLTPWS 271



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V  +G+I  L     +    + ++          +L Q+ + +  RML A+  + +    
Sbjct: 41  VTALGLIAPLFLPSPQQVFSKLLLIASAQGFMDATLWQHLAASLTRMLIALTAAAVIGIP 100

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L   S     +L P++++ + IP L +L   V++F      K++   LA        
Sbjct: 101 VGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIWFGIGETSKILLISLAIFA----- 155

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +T S    + N  +     +RS   + WQ   ++ +P ++P ++  + + +  GW 
Sbjct: 156 ---PVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWS 212

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            +VA+E+I          G+G  +  A  E     ++ A + ++  I    +L  R +  
Sbjct: 213 TLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAFIAFSLELGLRALQR 265

Query: 266 WSNKFRLERT 275
               +  E++
Sbjct: 266 RLTPWSGEQS 275


>gi|227821372|ref|YP_002825342.1| hypothetical amino acid ABC-transporter ATP-binding protein
           [Sinorhizobium fredii NGR234]
 gi|227340371|gb|ACP24589.1| hypothetical amino acid ABC-transporter ATP-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 295

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 97/233 (41%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ +I ++                  + +    +     +T   +    V+S+     
Sbjct: 61  PIILVLIALIAWFASRNWKVVAGAVGTLLLIGYFDMWDDTMKTISMIFVCTVLSIAVGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + ++S R+  ++ P+LD+MQ++P   +L   V+       GKV G     I+AI   
Sbjct: 121 LGIIMSRSDRVQNIINPVLDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + +D+ E + +F  S WQK   + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTNLGIRLVDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 93/284 (32%), Gaps = 15/284 (5%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLG--VIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           T F      S       +    +   R  G  +  F  P  F  + + + ++        
Sbjct: 5   TKFPHMNDDSLRELKKAIDEGFRTFTRAYGDGIESFFDPLQFFLIEAERFMTRTPWPIIL 64

Query: 350 CVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
            ++  +A   +  W+ +   V          +      T+  + V  +++  + IP+GI 
Sbjct: 65  VLIALIAWFASRNWKVVAGAVGTLLLIGYFDMWDDTMKTISMIFVCTVLSIAVGIPLGII 124

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     + + I P   ++   P+ V+   VV  +        +   + ++      ++  
Sbjct: 125 MSRSDRVQNIINPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRL 180

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G      D  E A +F  + W+  + + +P   P  + G       A    +++ + 
Sbjct: 181 TNLGIRLVDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMI 240

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                     GLG  + ++     F   +   L +    +  +R
Sbjct: 241 G-------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|310830348|ref|YP_003965448.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753254|gb|ADO44397.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 303

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V  ++  +  G   +        +  I +    L   +  T   +    +++++    
Sbjct: 69  IVVFLVLVGITWGTSRSWKITAGAGVALIGIGWFGLWNDSMITLSMVTVCTLVAVIIGLP 128

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S R   ++ P+LD+MQ++P   +L   VV F     GKV G     I+A+   
Sbjct: 129 IGILTARSDRAQRIITPVLDVMQTMPSFVYLIPVVVIFG---IGKVPGMIAVVIYAMP-- 183

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + R+  E + +F  S  QK W + +P ++P L+  +  ++     
Sbjct: 184 ---PMIRLTNLGIRLVDREAIEAADAFGSSERQKLWNVQLPLALPTLMTGVNQTIMMALS 240

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + M+ VG       G+G  +  AI  Q           ++ +   +D+
Sbjct: 241 MVVVASMVGVG-------GLGRNVLQAINNQFFTIGFLNGFALVAIAITFDR 285



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 11/275 (4%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +        +   + V+     +             L      +  + +F   V     
Sbjct: 22  AMRAMRRTIDTGFRDMVRGASSYIDAATAPVQSFLNTLEGLFVNTPWIVVFLVLVGITWG 81

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
              +W+                +     IT+  V V  ++A II +P+GI          
Sbjct: 82  TSRSWKITAGAGVALIGIGWFGLWNDSMITLSMVTVCTLVAVIIGLPIGILTARSDRAQR 141

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I P   ++   P+ V+   VV       +   + + +         ++     G     
Sbjct: 142 IITPVLDVMQTMPSFVYLIPVVVIFGIGKVPGMIAVVIY----AMPPMIRLTNLGIRLVD 197

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E A +F  +  +    + LP   P  +TG       A +  +V+ +   G      
Sbjct: 198 REAIEAADAFGSSERQKLWNVQLPLALPTLMTGVNQTIMMALSMVVVASMVGVG------ 251

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            GLG  + ++     F    L    +    +  +R
Sbjct: 252 -GLGRNVLQAINNQFFTIGFLNGFALVAIAITFDR 285


>gi|225414562|ref|ZP_03761751.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme
           DSM 15981]
 gi|225041918|gb|EEG52164.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme
           DSM 15981]
          Length = 266

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 93/245 (37%), Gaps = 25/245 (10%)

Query: 346 IFWFCVVCGVAIGIAWQ---------------SIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           + W  +V  V + + WQ                +       +Y +   +     ++  RV
Sbjct: 16  LLWIAIVFPVLVILLWQFASTHGLVKASLVPAPLTIAKTFLSYIESGKLWKNLSVSFGRV 75

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
               +I ++  +  G  +G    +++       +L   P     P+V+        +   
Sbjct: 76  ACGYVIGAVCGVVAGFLMGLFKPVNAAFSGIVSVLRPIPTIALVPIVILLAGIGFSSK-- 133

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++ FG+ W +L N + G  +  N   EVA ++ I   +    II+P   P  +TG 
Sbjct: 134 --VAIIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGL 191

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 AW + + +E+ +       +TG+G  I  S E  +   + + VL++    L ++
Sbjct: 192 RLGMSNAWMSVVAAEMIA------SSTGIGYLITLSRETANARVMYMCVLVIGVIGLFID 245

Query: 571 RFLWH 575
           R L  
Sbjct: 246 RGLTR 250



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 23/249 (9%)

Query: 22  LLAFVLVIGIINILLHGIQET---------TVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           LL   +V  ++ ILL     T           P  I       ++   L +  S +  R+
Sbjct: 16  LLWIAIVFPVLVILLWQFASTHGLVKASLVPAPLTIAKTFLSYIESGKLWKNLSVSFGRV 75

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               VI  +   V   L    + +      I+ +++ IP +  +   ++     +  K  
Sbjct: 76  ACGYVIGAVCGVVAGFLMGLFKPVNAAFSGIVSVLRPIPTIALVPIVILLAGIGFSSK-- 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +  I     W +  +    + ++   L EV+ ++R+   +  + + VP S+P +
Sbjct: 134 ------VAIIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAI 187

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + + MS  W  VVA+EMI          GIG  I L+ +  +   +   +L +  + 
Sbjct: 188 LTGLRLGMSNAWMSVVAAEMIASST------GIGYLITLSRETANARVMYMCVLVIGVIG 241

Query: 253 FLYDQLLFR 261
              D+ L R
Sbjct: 242 LFIDRGLTR 250


>gi|120611631|ref|YP_971309.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120590095|gb|ABM33535.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 289

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 106/298 (35%), Gaps = 13/298 (4%)

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           + R T  +              +       R L  +    P     L +     ++    
Sbjct: 1   MSRVTGAMPADPQPGAPAAPASAAVHAAPRRRLRPLEPVAPRTRWLLGAAFFALFVAVWS 60

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              +   V+       I  +   +        +    +T++RV+   ++A+++ +P+GI 
Sbjct: 61  VATLGGYVSPTFLASPITMVREGWLLFTQFGFLHDIGMTVWRVLGGFVLAALVAVPLGIA 120

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    + + ++PF       PA+ F PL++       L       L++  G+ + I+  
Sbjct: 121 MGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLGELQK----LLVIFIGSVFQIILM 176

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V         D  E A +   T     R +++PG  P          G AW   IV+E+ 
Sbjct: 177 VAVIVGNARKDLVEAAYTLGATPTGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELI 236

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582
                   ++G+G  I +S    +  +++ G++++    L  +         L+ +  
Sbjct: 237 G------SSSGIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFLFKALNRRLFAWSA 288



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 18/270 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHS 60
            L  + P     R          FV V  +  +  +        P  +V    +      
Sbjct: 32  RLRPLEPVAPRTRWLLGAAFFALFVAVWSVATLGGYVSPTFLASPITMVREGWLLFTQFG 91

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                  T  R+L   V++ L            + +   L P +   + +P   F+   +
Sbjct: 92  FLHDIGMTVWRVLGGFVLAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLI 151

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            EL  +  IF   V+ +   +   + N  +DL E + +   +     
Sbjct: 152 LWAGLG--------ELQKLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATPTGIV 203

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   
Sbjct: 204 RRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQ 257

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           I++ ++ +  +  + D L   L R +  WS
Sbjct: 258 IIFGIIVIGLIGLVSDFLFKALNRRLFAWS 287


>gi|294626068|ref|ZP_06704676.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599604|gb|EFF43733.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 283

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F   + + + L         P   +           L  +   + LR+L+   I    
Sbjct: 34  LIFFAGLELASALGWTPSYLLPPPSQILRTLADEANRGLASHVGASVLRVLAGFSIGAGL 93

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SR L  +L P    ++++P L ++   +++            E   I  I
Sbjct: 94  GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +   +   L  + R L E+  S+ LS  +    + +P ++P +   +  S+S 
Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W F+VA+E+I          G+G  ++   +      ++ A++ +  +  L D LL
Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 14/261 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372
            R    +    P+  L+L ++     +  IF+  +    A+G     +      I+    
Sbjct: 6   LRVSASVAGTPPQPRLRLPASSLGWLLPLIFFAGLELASALGWTPSYLLPPPSQILRTLA 65

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            +    +      ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  
Sbjct: 66  DEANRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL++  +             L+  G  + +   V++G         E+  S+ ++  R
Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I+LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E    
Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  ++++       +  L
Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256


>gi|241113176|ref|YP_002973011.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861384|gb|ACS59050.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 295

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++  II ++      +        +  + +    +     RT   +    V+S+     
Sbjct: 61  PIITAIILVIAWFGSRSLKIVLGCLVTLLLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S RL  V+ PILD+MQ++P   +L   V+       GKV G     I+AI   
Sbjct: 121 MGILMARSDRLQRVINPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + +D+ E + +F  S  QK + + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q       + +L I WF  
Sbjct: 16  RNLKKAIDDGFRAFTRSYGDAIESLFSPLQHFLIAADRFMTQTPWPIITAIILVIAWFGS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +     ++  I     + D +        T+  + V  +++  I IP+GI +   
Sbjct: 76  RSLKIVLGCLVTLLLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPMGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 DRLQRVINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +V+ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|302518088|ref|ZP_07270430.1| glycine betaine ABC transport system permease [Streptomyces sp.
           SPB78]
 gi|302426983|gb|EFK98798.1| glycine betaine ABC transport system permease [Streptomyces sp.
           SPB78]
          Length = 1150

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L+ GI+ +L   ++  T    ++  V   L D   L + A  +   ++ A VI+L+   
Sbjct: 49  LLLAGILAVLAFWLRGLTA--GVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                 A+S+R   V+ P+LD  Q++P + +L   + +F    P        A I A   
Sbjct: 107 PLGIWTARSQRASAVVRPLLDFTQTMPAMVYLIPAIFFFGLGVP--------AGIVATII 158

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +  +    + +P ++P ++  +   +    
Sbjct: 159 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + M+  G            +  AI   D+     A ++++ +    D+++
Sbjct: 219 SMVVIAGMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 266



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                +  V           +++   +   D L +      +   V+V  +IA +I +P+
Sbjct: 49  LLLAGILAVLAFWLRGLTAGVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW       S+ ++P        PA V+    +  + ++ L     +   +IFG     
Sbjct: 109 GIWTARSQRASAVVRPLLDFTQTMPAMVYL---IPAIFFFGLGVPAGIVATIIFG-FAPA 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G         +  +++
Sbjct: 165 VRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNLSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   G +          + ++             + +    + L+R +
Sbjct: 225 GMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 266


>gi|302873274|ref|YP_003841907.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|307688559|ref|ZP_07631005.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|302576131|gb|ADL50143.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
          Length = 253

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+++R  V   IA+I  I +G+  G+       I P  Q+L       +FP +V
Sbjct: 54  LFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKAWDIIDPIVQVLRPVSPIAWFPFIV 113

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     NL   +++     + IL + +         + +VAS+F I G +    I+
Sbjct: 114 IIFGIG----NLPAIVIIFIAAFFPILLSTVTAVKNIEKSYLKVASNFEIKGLKLMGKIV 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP IFPY       A G AW   +  E+          +GLG  I ++        ++ G
Sbjct: 170 LPAIFPYIANAMHIALGSAWVFLVAGEMVG------AQSGLGYLIIDARNNLRLDMLMAG 223

Query: 559 VLIMCCFVLALNRFLWH 575
           ++ +    L L++ +  
Sbjct: 224 IIFIGLIGLILDKLIAR 240



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 92/224 (41%), Gaps = 14/224 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G      P ++V  +   ++   L +Y   +  R      I+ +F      +    ++  
Sbjct: 31  GKTSIPSPLEVVKAIKDMIEDKILFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKAW 90

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            ++ PI+ +++ +  + +  F V+ F            L AI  IF +  + +  S   +
Sbjct: 91  DIIDPIVQVLRPVSPIAWFPFIVIIFGIG--------NLPAIVIIFIAAFFPILLSTVTA 142

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + NI +   +V+ +F + G +    + +P   P +   M +++   W F+VA EM+    
Sbjct: 143 VKNIEKSYLKVASNFEIKGLKLMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMVG--- 199

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                 G+G  I  A     L  ++  ++ +  +  + D+L+ R
Sbjct: 200 ---AQSGLGYLIIDARNNLRLDMLMAGIIFIGLIGLILDKLIAR 240


>gi|260555329|ref|ZP_05827550.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260411871|gb|EEX05168.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 289

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 95  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + Y+ILP   
Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWYVILPTAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + +E+ +         G+G  +  + +      V+LG++++ 
Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLITDTVILGIIVIA 264

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 265 IVAVSFELFL 274



 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 88  ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FWY+ +P ++P ++  + + +  GW  +VA+E++          GIG  +  A +    
Sbjct: 200 VFWYVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLIT 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274


>gi|209546966|ref|YP_002278884.1| amino acid ABC transporter permease [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538210|gb|ACI58144.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 295

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     RT   +    ++S+        L A+S RL  V+ PILD+MQ++P   +L   V
Sbjct: 96  MWDDTMRTVSMIFVCTILSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S  QK 
Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSRSQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 86/280 (30%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q         +L I WF  
Sbjct: 16  RNLKKAIDDGFRGFTRAYGDGIETLFVPLQHFLIAAERFMTQTPWPIITLIVLAIAWFAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +     ++  I     + D +        T+  + V  I++  I IP+GI +   
Sbjct: 76  RSLKIVFGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTILSIAIGIPMGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 DRLQRVINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSRSQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|281492007|ref|YP_003353987.1| glycine betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375716|gb|ADA65220.1| Glycine betaine/carnitine/choline ABC transporter, permease and
           substrate-binding protein [Lactococcus lactis subsp.
           lactis KF147]
          Length = 573

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83
           F L+I ++ IL   +    +   +   + ++L     L      T   +L + ++S++  
Sbjct: 53  FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA  
Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA-- 167

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +  +  +L E + SF  +  QK + L  P +   ++  +  ++   
Sbjct: 168 ---LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++  D+     + ++++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401
           FW  +     + I           FT+  +  +   G       T+  V++  +++ II 
Sbjct: 53  FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GIW+     ++  +QP    +   P  V+    V+      +       +       
Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
              +     G      +  E A SF  T  +    +  P      + G       A +  
Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +  + +     +  +  + +    + ++RF
Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272


>gi|167854721|ref|ZP_02477500.1| ABC transporter, permease protein [Haemophilus parasuis 29755]
 gi|167854135|gb|EDS25370.1| ABC transporter, permease protein [Haemophilus parasuis 29755]
          Length = 245

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 94/234 (40%), Gaps = 14/234 (5%)

Query: 344 LDIFWFCVVCGVA----IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           L +FW      +A    I      +  + + +       +      ++ R++V + +A +
Sbjct: 15  LVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWASVQRIIVGLTVALL 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             IP+G+ +G    +     P  Q L       + P+VV  +    L     +  L+ F 
Sbjct: 75  CGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEVGDL----PVYFLIAFA 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W ++ +  +G  +    +  ++ S   +      +II+P I  + +TG   + G AW 
Sbjct: 131 AIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILTGLRVSLGIAWV 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  E+           GLG +I ++ ++ ++ E++  V+++      L+  L
Sbjct: 191 VLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVIGLIGWGLDSLL 238



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 17/252 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASR 67
           + R        L++ VL      +LL    +      P   ++ +        +  +   
Sbjct: 1   MKRNYLYGFTGLISLVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWA 60

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R++  + ++LL           S+ L M   P    ++ I  L ++   V++     
Sbjct: 61  SVQRIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEVG- 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  +L   F I  + +W++  S    + +I      +SRS   S  +   ++ VP 
Sbjct: 120 -------DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPA 172

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++  + +S+   W  +V  EM+ V +      G+G +I           ++ A++ 
Sbjct: 173 ITGHILTGLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIV 226

Query: 248 MLGVIFLYDQLL 259
           +  + +  D LL
Sbjct: 227 IGLIGWGLDSLL 238


>gi|126665912|ref|ZP_01736893.1| glycine betaine/L-proline transport system permease [Marinobacter
           sp. ELB17]
 gi|126629846|gb|EBA00463.1| glycine betaine/L-proline transport system permease [Marinobacter
           sp. ELB17]
          Length = 686

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 89/549 (16%), Positives = 179/549 (32%), Gaps = 61/549 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +L A+ +S+L       +A +++    VL P+L++ Q++P   +L   VV+F 
Sbjct: 169 AMQTLSFVLVAVPLSVLLGLTLGIIAFRNKTFEAVLAPLLNVAQTMPHFSYLIPVVVFFG 228

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G   GA    IFA        M       L  +  ++ E       +  Q  + + 
Sbjct: 229 ---IGDHAGAISTVIFATP-----PMIRLTILGLKKVSPEVVEAGMMSGCNSRQLMFKVL 280

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +          ++    + V  + I   G+G  + +++    +   L  
Sbjct: 281 IPTARHDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGYDLLVSLNMLKIGQALEL 333

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK-FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
            ++++ +  + D+L     + W+ K          +    + L       F   + Y + 
Sbjct: 334 GISIVLIAVVLDRLS----LAWAKKQVDYFADVPFHLRHKYSLAFVGILIFTSIVAYIAS 389

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC---------- 353
             F   +N    +  + G+    F ++ +          +    +F +            
Sbjct: 390 MAFPDKANYFYFIHESQGLTTEKFWDSIVDWIITNTYDSVQSFNFFMITSILMPMKEAYL 449

Query: 354 ---GVAIGIAWQSIGYIVNHFTYQDVLYVIWL----------GCITMFRVVVLIIIASII 400
                A        GYIV       V                  IT +     +II+  I
Sbjct: 450 SMPVAATLFLVAGTGYIVGGLRSAIVATAFIAFIALTPWWDRALITAYMTTFAVIISVTI 509

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
              VGI     P  +  +         FP+ V+   V+       L+  + + +      
Sbjct: 510 GCSVGILCSRSPKATKFMLLVCDTFQTFPSFVYLIPVIMLFGVSDLSVLIAVIVYATIPA 569

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             Y     + G S  P   +E  S   +   +    I LP  FP+ + G       +   
Sbjct: 570 TRY----TVEGLSNVPKSLQEAGSMSGVNRTQRLLKIELPLAFPHIMLGINQTVVFSLFM 625

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
            I+               LG  I +S     G    +VLG+ +     LA++  +     
Sbjct: 626 IIIGAFIGTDD-------LGQLIMQSLSEANGMGQGIVLGLCV-AFIGLAVDHLI----N 673

Query: 579 LYGTRCLRL 587
            +  +  R+
Sbjct: 674 TWAEQRKRV 682



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 18/207 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L        A  T      A++IS+        L ++S +    ++ + D  Q+ P  
Sbjct: 483 IALTPW--WDRALITAYMTTFAVIISVTIGCSVGILCSRSPKATKFMLLVCDTFQTFPSF 540

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   ++ F          ++L+ + A+        T    + L N+P+ L+E      
Sbjct: 541 VYLIPVIMLFGV--------SDLSVLIAVIVYATIPATRYTVEGLSNVPKSLQEAGSMSG 592

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P + P ++  +  ++    F ++    I   D       +G  I  ++
Sbjct: 593 VNRTQRLLKIELPLAFPHIMLGINQTVVFSLFMIIIGAFIGTDD-------LGQLIMQSL 645

Query: 234 KEQD-LLAILYAMLTMLGVIFLYDQLL 259
            E + +   +   L +  +    D L+
Sbjct: 646 SEANGMGQGIVLGLCVAFIGLAVDHLI 672



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/237 (9%), Positives = 66/237 (27%), Gaps = 19/237 (8%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
                      VA G           + +    +  I++     +   +  +   ++ +P
Sbjct: 122 WARIPALPWPAVAAGAFLAGQYLGGRNLSLLAGISTIYIAVFGQWTPAMQTLSFVLVAVP 181

Query: 404 VGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           + + +G              + + P   +    P   +    +  V ++ +  +      
Sbjct: 182 LSVLLGLTLGIIAFRNKTFEAVLAPLLNVAQTMPHFSYL---IPVVVFFGIGDHAGAIST 238

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +IF T   ++   I G      +  E          +    +++P      + G      
Sbjct: 239 VIFAT-PPMIRLTILGLKKVSPEVVEAGMMSGCNSRQLMFKVLIPTARHDILIGVNQVIM 297

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                ++++             GLG  +  S       + +   + +    + L+R 
Sbjct: 298 QCLAMAVIASFIG-------AKGLGYDLLVSLNMLKIGQALELGISIVLIAVVLDRL 347


>gi|15673433|ref|NP_267607.1| betaine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|7188801|gb|AAF37879.1|AF234619_2 OpuABC [Lactococcus lactis]
 gi|12724442|gb|AAK05549.1|AE006375_3 betaine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|326406928|gb|ADZ63999.1| glycine betaine/carnitine/choline ABC transporter, permease and
           substrate-binding protein [Lactococcus lactis subsp.
           lactis CV56]
          Length = 573

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83
           F L+I ++ IL   +    +   +   + ++L     L      T   +L + ++S++  
Sbjct: 53  FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA  
Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA-- 167

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +  +  +L E + SF  +  QK + L  P +   ++  +  ++   
Sbjct: 168 ---LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++  D+     + ++++ +  + D+ 
Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401
           FW  +     + I           FT+  +  +   G       T+  V++  +++ II 
Sbjct: 53  FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GIW+     ++  +QP    +   P  V+    V+      +       +       
Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
              +     G      +  E A SF  T  +    +  P      + G       A +  
Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +  + +     +  +  + +    + ++RF
Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272


>gi|271501794|ref|YP_003334820.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270345349|gb|ACZ78114.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 400

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 23/242 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    +L F L+   I     G+        I  I   +         A  T   +L+A+
Sbjct: 148 PAPIAILVFSLLAWQIASFGMGVATLLSLIAIGAIGAWS--------QAMVTLALVLTAL 199

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
              ++         A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +
Sbjct: 200 FFCIIIGLPLGIWLANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVV 256

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             IFA     +  +       +  +P DL E ++SF  S  Q  + + +P +MP ++  +
Sbjct: 257 TIIFA-----LPPIVRLTLLGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGI 311

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D
Sbjct: 312 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILD 364

Query: 257 QL 258
           +L
Sbjct: 365 RL 366



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      +   V   +AWQ   + +   T   ++ +  +G      +T+  V+  +   
Sbjct: 143 LLTSVPAPIAILVFSLLAWQIASFGMGVATLLSLIAIGAIGAWSQAMVTLALVLTALFFC 202

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+         ++P    +   PA V+   +V          N+   ++ I
Sbjct: 203 IIIGLPLGIWLANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 258

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   + G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 259 IFALPPIVRLTLLGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 318

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 366


>gi|331699980|ref|YP_004336219.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954669|gb|AEA28366.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 270

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R++V ++IA ++ +  G+ IG    + +  +P  Q L       + P+ +       
Sbjct: 81  SLWRLLVGLLIAVVLGVVTGLAIGTWQSLETASRPVFQFLRMVSPLSWAPVAIGLFGIGD 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  L+     W I+ N  AG  +    F   A S   T       ++LP I P+
Sbjct: 141 R----PVFFLVAAAAVWPIVLNTAAGVRSIDQGFLLAARSLGATPAETLTSVVLPAIRPH 196

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+         T+GLG  I  S ++ ++ +V+  +L++   
Sbjct: 197 VLTGLRLALGIGWVVLVPAEMLG------VTSGLGYEILNSRDQLAYDKVMAVILVIGLL 250

Query: 566 VLALNRFLWHPL 577
              L+      L
Sbjct: 251 GSLLDALARRAL 262



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 81/225 (36%), Gaps = 14/225 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           + +   P+  +  +        L      +  R+L  ++I+++   V        + L  
Sbjct: 52  MLQDFAPQHAIPAIGALAAQGVLFPDIWTSLWRLLVGLLIAVVLGVVTGLAIGTWQSLET 111

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
              P+   ++ +  L +    +  F                F +  + VW +  +    +
Sbjct: 112 ASRPVFQFLRMVSPLSWAPVAIGLFGIGDRP--------VFFLVAAAAVWPIVLNTAAGV 163

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I +     +RS   +  +    + +P   P ++  + +++  GW  +V +EM+ V   
Sbjct: 164 RSIDQGFLLAARSLGATPAETLTSVVLPAIRPHVLTGLRLALGIGWVVLVPAEMLGV--- 220

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
                G+G  I  +  +     ++  +L +  +  L D L  R +
Sbjct: 221 ---TSGLGYEILNSRDQLAYDKVMAVILVIGLLGSLLDALARRAL 262


>gi|49083481|gb|AAT51045.1| PA3936 [synthetic construct]
          Length = 273

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
             P         +R +    +    ++   A    W  + ++       + L  +W    
Sbjct: 13  PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72

Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + 
Sbjct: 73  LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V       L+      LL+       +L    AG         +       + W+  
Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+ILP   P  +TG   A G  W+  + +E+ +         GLG  +  + +  +   
Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242

Query: 555 VVLG 558
           VV+G
Sbjct: 243 VVVG 246



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L  
Sbjct: 75  ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  I+ +    +  +    +  + R   +  R    S WQ
Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +    
Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +L +  +   ++   + + R    W
Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271


>gi|75674654|ref|YP_317075.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419524|gb|ABA03723.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 285

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T      ++    +++ RV++ + +A +I +PVG+ +G    +++   P  Q L     
Sbjct: 80  VTMLGQPDLLVHVLVSLRRVLIGLALALLIGVPVGLAVGSYSRLNTATSPAFQFLRMISP 139

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+ V          +  +  ++ F   W I+ N   G       +  +A S   T 
Sbjct: 140 LSWMPIAVMVFGVG----DQPIYFMLAFAAVWPIMLNTAEGVRRLQPSWLSLADSLAATR 195

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W    Y+ILPG+  + +TG   A G  W   +  E+         + GLG +I ++ ++ 
Sbjct: 196 WETLCYVILPGVLGHVLTGLRLAVGIVWIVLVPCEMLG------VSAGLGYFILDTRDRL 249

Query: 551 SFPEVVLGVLIMCCFVLALN 570
           ++ E++  VL++      L+
Sbjct: 250 AYSELMATVLMIGVLGFLLD 269



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 77/220 (35%), Gaps = 14/220 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G      P   +  +   L    L  +   +  R+L  + ++LL             RL
Sbjct: 64  QGFIRQFSPTTAIPELVTMLGQPDLLVHVLVSLRRVLIGLALALLIGVPVGLAVGSYSRL 123

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
                P    ++ I  L ++   V+ F           +    F +  + VW +  +  +
Sbjct: 124 NTATSPAFQFLRMISPLSWMPIAVMVFGVG--------DQPIYFMLAFAAVWPIMLNTAE 175

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  +      ++ S   + W+   Y+ +P  +  ++  + +++   W  +V  EM+ V 
Sbjct: 176 GVRRLQPSWLSLADSLAATRWETLCYVILPGVLGHVLTGLRLAVGIVWIVLVPCEMLGVS 235

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                  G+G +I           ++  +L +  + FL D
Sbjct: 236 A------GLGYFILDTRDRLAYSELMATVLMIGVLGFLLD 269


>gi|238022879|ref|ZP_04603305.1| hypothetical protein GCWU000324_02800 [Kingella oralis ATCC 51147]
 gi|237865687|gb|EEP66825.1| hypothetical protein GCWU000324_02800 [Kingella oralis ATCC 51147]
          Length = 249

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V ++      IP+G  +G          P  Q L       + P+ V     
Sbjct: 60  GASLQRVAVGLMGTLAAGIPIGFALGLSRRAEEAAGPAFQFLRMVSPLSWMPVAVMLFGI 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N  +  L+ F   W I+ N  +G       + E+  S   T       I+LP + 
Sbjct: 120 G----NAPIYFLLAFAAVWPIILNTASGVRNINPQWLELGRSLSATRAEMLFKIMLPAVL 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G +W   +  E+           GLG +I ++ ++ ++ E++  ++++ 
Sbjct: 176 SDILNGLRLAIGISWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIG 229

Query: 564 CFVLALN 570
                L+
Sbjct: 230 IIGWLLD 236



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 81/229 (35%), Gaps = 14/229 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +I      +     P   +  +   L   +L  +   +  R+   ++ +L       
Sbjct: 22  IGSLILAQSMPLANMLTPAAALGSLAHLLPEAALWAHIGASLQRVAVGLMGTLAAGIPIG 81

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
                SRR      P    ++ +  L ++   V+ F                F +  + V
Sbjct: 82  FALGLSRRAEEAAGPAFQFLRMVSPLSWMPVAVMLFGIG--------NAPIYFLLAFAAV 133

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  +    + NI     E+ RS   +  +  + + +P  +  ++  + +++   W  +
Sbjct: 134 WPIILNTASGVRNINPQWLELGRSLSATRAEMLFKIMLPAVLSDILNGLRLAIGISWVVL 193

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           V  EM+ V +      G+G +I           ++ A++ +  + +L D
Sbjct: 194 VPCEMLGVNE------GLGYFILDTRDRLAYSELMAAIVLIGIIGWLLD 236


>gi|76781920|gb|ABA54729.1| AbsT2 [Alcaligenes sp. O-1]
          Length = 244

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M RVV    IA ++ + +G+ +         I PF + L        FPL
Sbjct: 42  FELFGALYASMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPL 101

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +       L+     + +L +  AG           ASS   + W   R 
Sbjct: 102 AILWFGIGDASK----IFLIALSCCFPVLLSTYAGVQGIDVALVRAASSLGASRWEIVRN 157

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P  +TG   + G A    I SE+           G+G  + ++ +      + 
Sbjct: 158 VILPGSIPSILTGVRISWGIALIVIIASEMVG------AVNGIGFMVLDAQQTFRTERLF 211

Query: 557 LGVLIMCCFVLALNRFL 573
            G+ I+       +R L
Sbjct: 212 SGIAIIAAIGYGTDRAL 228



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 17/216 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R++S   I+++       L A SR    V+ P ++ ++ I  L      
Sbjct: 43  ELFGALYASMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPLA 102

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           + + IF I  S  + +  S Y  +  I   L   + S   S W+ 
Sbjct: 103 ILWFGIG--------DASKIFLIALSCCFPVLLSTYAGVQGIDVALVRAASSLGASRWEI 154

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+P ++  + +S       ++ASEM+        + GIG  +  A +     
Sbjct: 155 VRNVILPGSIPSILTGVRISWGIALIVIIASEMVG------AVNGIGFMVLDAQQTFRTE 208

Query: 240 AILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRL 272
            +   +  +  + +  D+    L R ++ W  ++R+
Sbjct: 209 RLFSGIAIIAAIGYGTDRALRWLRRSLVPWHQEYRV 244


>gi|312865610|ref|ZP_07725835.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus downei F0415]
 gi|311098878|gb|EFQ57097.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus downei F0415]
          Length = 575

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L++ +  ++      T     +  I  + +    L      T   +L + +IS+L
Sbjct: 57  WILMLLIVALAYLISKKWSFTI----LTAIGLLYIYNQELWGDLINTFTLVLLSSLISIL 112

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AK+     V+ PILD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 113 IGIPLGIWMAKNETAKKVINPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFA 169

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +          +  IP +L E S +F  +  QK + + +P +   ++  +  ++ 
Sbjct: 170 -----LPPTVRMTNLGIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIM 224

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI         PG+G+ +  A++  ++       L ++ +  + D+ 
Sbjct: 225 LSLSMVVTASMI-------GAPGLGNGVLSALQHAEIGNGFVNGLALVILAIIIDRF 274



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    V     I   W           Y     +      T   V++  +I+ +I IP
Sbjct: 57  WILMLLIVALAYLISKKWSFTILTAIGLLYIYNQELWGDLINTFTLVLLSSLISILIGIP 116

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW+         I P    +   PA V+    V+      +       +         
Sbjct: 117 LGIWMAKNETAKKVINPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALPP 172

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            +     G    P +  E + +F  T  +    + LP      + G       + +  + 
Sbjct: 173 TVRMTNLGIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIMLSLSMVVT 232

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +  + +        +  L +    + ++RF
Sbjct: 233 ASMIG-------APGLGNGVLSALQHAEIGNGFVNGLALVILAIIIDRF 274


>gi|297584982|ref|YP_003700762.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297143439|gb|ADI00197.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 254

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++FR     + A +I IP+G+ +G    +   + P  Q+L       + P +V      
Sbjct: 60  ISLFRFFAGYLSAVLIAIPLGLLLGRSNVMWRIVDPVVQVLRPVAPVAWSPFIVLWFGIG 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               N+   +++     + +L + ++        + ++A +  I        II P  FP
Sbjct: 120 ----NMPAIVIIFIAAFFPVLLSTVSAVKKVDRTYLKLAENLEIGKVSLLVKIIFPAAFP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y   G   A G AW   +  E+          +GLG  I ++        V+ G++ +  
Sbjct: 176 YIANGLHIAVGTAWIFLVAGEMIG------AQSGLGYLIVDARNALDLDLVLAGIITIGV 229

Query: 565 FVLALNRFL 573
             L L++ +
Sbjct: 230 LGLLLDKAV 238



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + + +   +   ++  + S +  R  +  + ++L       L  +S  +  ++ 
Sbjct: 35  LPSPLVVGEGLVSLIRSGAMADHVSISLFRFFAGYLSAVLIAIPLGLLLGRSNVMWRIVD 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +  + +  F V++F            + AI  IF +  + +  S   ++  +
Sbjct: 95  PVVQVLRPVAPVAWSPFIVLWFGIG--------NMPAIVIIFIAAFFPVLLSTVSAVKKV 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R   +++ +  +        +  P + P +   + +++   W F+VA EMI        
Sbjct: 147 DRTYLKLAENLEIGKVSLLVKIIFPAAFPYIANGLHIAVGTAWIFLVAGEMIG------A 200

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A    DL  +L  ++T+  +  L D+ +
Sbjct: 201 QSGLGYLIVDARNALDLDLVLAGIITIGVLGLLLDKAV 238


>gi|148653178|ref|YP_001280271.1| glycine betaine ABC transporter substrate-binding protein
           [Psychrobacter sp. PRwf-1]
 gi|148572262|gb|ABQ94321.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Psychrobacter sp. PRwf-1]
          Length = 652

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 98/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+IG++ +L               +    +    L     +T   ++ +++++++     
Sbjct: 411 LIIGLVALLGWLATRKIWFAVSCALGLFLIGAFGLWPALVQTMALLIVSVIVTMVVGIPM 470

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A S  L  V+ P+LD+MQ++P   +L   ++ F           ++ A+FA     
Sbjct: 471 GILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG--------KVPALFATIIYA 522

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +P ++ E  RSF  +  Q   ++ +P ++P ++  +  ++      
Sbjct: 523 LPPLIRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKLPQALPSIMAGINQAVMMSLSM 582

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI         PG+G  +  +I+  ++   L A   ++ +  + D++
Sbjct: 583 VVLASMI-------GAPGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 627



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 107/288 (37%), Gaps = 18/288 (6%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
            T+   F G+  W+F + L+N++  + +  G + F    +         +  ++ +    
Sbjct: 352 NTSAAAFSGFPEWSFENQLNNSLSYVVQNFGTV-FRSISHGTLTYLLLPIEKLMHLTPPW 410

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPV 404
           ++ G+   + W +   I    +    L++I    +      TM  ++V +I+  ++ IP+
Sbjct: 411 LIIGLVALLGWLATRKIWFAVSCALGLFLIGAFGLWPALVQTMALLIVSVIVTMVVGIPM 470

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +     +   + P   ++   P+ V+   V+           +      I      +
Sbjct: 471 GILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG----KVPALFATIIYALPPL 526

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +   + G    P++  E   SF     +   +I LP   P  + G   A   + +  +++
Sbjct: 527 IRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKLPQALPSIMAGINQAVMMSLSMVVLA 586

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           GLG  + +S +  +  + +     +    + ++R 
Sbjct: 587 SMIG-------APGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 627


>gi|313109371|ref|ZP_07795334.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa 39016]
 gi|310881836|gb|EFQ40430.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa 39016]
          Length = 272

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
             P         +R +    +    ++   A    W  + ++       + L  +W    
Sbjct: 13  PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72

Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + 
Sbjct: 73  LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V       L+      LL+       +L    AG         +       + W+  
Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+ILP   P  +TG   A G  W+  + +E+ +         GLG  +  + +  +   
Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242

Query: 555 VVLG 558
           VV+G
Sbjct: 243 VVVG 246



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L  
Sbjct: 75  ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  I+ +    +  +    +  + R   +  R    S WQ
Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +    
Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +L +  +   ++   + + R    W
Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271


>gi|255516844|ref|ZP_05384520.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Clostridium difficile QCD-97b34]
          Length = 229

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 84/197 (42%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+++  +I+S++ IP+G+  G    +    +P  + + + P     P+
Sbjct: 26  GSIFLNVYASVRRILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPM 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      +++I  + + I  N + G     N   EV  SF+++  R +  
Sbjct: 86  LILWFGIGEESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYK 141

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P      V G     G ++ A I +E+ +       ++GLG  I++  +      V+
Sbjct: 142 IIIPNSMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVL 195

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+ ++    +  +   
Sbjct: 196 VGIFVIGFLGILSDYLF 212



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+L   +IS L       +   ++++     P+ + M+S P L  +   +++F   
Sbjct: 34  ASVRRILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 93

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+I   LA+ F IF         +  + + N    L EV +SF LS  + F+ + +P
Sbjct: 94  EESKIIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIP 145

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            SM  +V  + + +   +  ++ +E+I          G+G  I+          +L  + 
Sbjct: 146 NSMLDIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIF 199

Query: 247 TMLGVIFLYDQLLFRPMIVWS 267
            +  +  L D L  + +  +S
Sbjct: 200 VIGFLGILSDYLFSKIITKFS 220


>gi|294665704|ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604546|gb|EFF47922.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 283

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F   + + + L         P   +           L  +   + LR+L+   I    
Sbjct: 34  LIFFAGLELASALGWTPSYLLPPPSQILRTLADEANRGLASHVGASVLRVLAGFSIGAGL 93

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SR L  +L P    ++++P L ++   +++            E   I  I
Sbjct: 94  GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +   +   L  + R L E+  S+ LS  +    + +P ++P +   +  S+S 
Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W F+VA+E+I          G+G  ++   +      ++ A++ +  +  L D LL
Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256



 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 14/261 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372
            R    +    P+  L+L ++     +  IF+  +    A+G     +      I+    
Sbjct: 6   LRVSASVAGTPPQPRLRLPASSLGWLLPLIFFAGLELASALGWTPSYLLPPPSQILRTLA 65

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            +    +      ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  
Sbjct: 66  DEANRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL++  +             L+  G  + +   V++G         E+  S+ ++  R
Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I+LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E    
Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  ++++       +  L
Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256


>gi|255262229|ref|ZP_05341571.1| glycine betaine/proline ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
 gi|255104564|gb|EET47238.1| glycine betaine/proline ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
          Length = 657

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 75/527 (14%), Positives = 168/527 (31%), Gaps = 41/527 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   ++ A  ++ +   +    A KS     V+ P+L ++Q++P   +L   V+
Sbjct: 143 WKIAMETMSVLVVAAPLAFVIGLLLGIAAWKSPAFNRVIKPVLSVLQTLPFFTYLLPAVI 202

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G   GA    ++AI       M       L  +  ++ E  +    S WQ   
Sbjct: 203 FFKV---GPTAGAVATIVYAIP-----PMILMTTLGLQRVSPEVIEAGKMSGCSRWQMLR 254

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ VP +   ++  +          ++    +VV    I +PG+G+ +   +    L   
Sbjct: 255 HVYVPAARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRS 307

Query: 242 LYAMLTMLGVIFLYDQLL----------FRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
               +T++ +    D+L           F     W  + +             +L +F +
Sbjct: 308 FEIGVTIVLLAVTLDRLSKAWVVKLPEHFERGTPWWVRHKYLVLGLAAFVGFTILAIFVE 367

Query: 292 -----TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
                     +      +        +  +    G IR+      L    +  +S     
Sbjct: 368 WFGEIGRKQTWSKGKEMDTAIKTFLALDGVQAVTGSIRYVLNVWVLNPFRDFLLSIPTSA 427

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F   +V       + ++       F             IT++ V+  + IA ++ +P+G+
Sbjct: 428 FIMFIVAFALAMASKKAAVLAAVFFGLVAFSGWWDRSVITLYSVLSAVAIAILLGLPIGV 487

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           +       S ++         FP+ ++    +        +  + + +  +     Y   
Sbjct: 488 FAARSERWSRRVLLACDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFAMVPLVRY--- 544

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             + G    P +  E A     T  +    + LP   P    G   A   A+   I++  
Sbjct: 545 -TVEGLRNVPPEMTEAADMSGATKMQKLVNVQLPLALPTMAVGFNQAIMFAFFMVIIAAF 603

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                       LG  +  +       +  +  + +    L  +  +
Sbjct: 604 IGTQD-------LGQELQRTLAGTDLGKNFVLGICVSLMALTCDMVI 643


>gi|300871643|ref|YP_003786516.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000]
 gi|300689344|gb|ADK32015.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000]
          Length = 249

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y +    IT+ RV    +IA II +P+G+ +G+   I   + P    +   P   + PL 
Sbjct: 47  YTVQNLLITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +                L+     + ++ N I G      ++   A S           I
Sbjct: 107 IVWFGLGDG----PTIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGAKNIDIMLDI 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPG  P ++TG   A G  W + I +E  +       + G G  + E+ ++   P++  
Sbjct: 163 ILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQQRLETPKLYA 216

Query: 558 GVLIMCCFVLALNRFL 573
            +++      +++R L
Sbjct: 217 LMIVSALIGFSMDRIL 232



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+    +I+ +       +   S+ + + + PI++ ++ +PI+ ++   +V+F 
Sbjct: 52  LLITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFG 111

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         IF I  S ++ +  +    +  I  +    +RS           + 
Sbjct: 112 LGDGP--------TIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGAKNIDIMLDII 163

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P  +    +++  GW  V+ +E I          G G  +  A +  +   +   
Sbjct: 164 LPGALPSFLTGCRLALGLGWMSVICAEFIATSK------GFGFILVEAQQRLETPKLYAL 217

Query: 245 MLTMLGVIFLYDQLL 259
           M+    + F  D++L
Sbjct: 218 MIVSALIGFSMDRIL 232


>gi|15599131|ref|NP_252625.1| permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1]
 gi|107103453|ref|ZP_01367371.1| hypothetical protein PaerPA_01004523 [Pseudomonas aeruginosa PACS2]
 gi|116051976|ref|YP_789181.1| taurine ABC transporter permease [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889782|ref|YP_002438646.1| putative permease of ABC taurine transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254236829|ref|ZP_04930152.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719]
 gi|254242624|ref|ZP_04935946.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192]
 gi|9950122|gb|AAG07323.1|AE004811_6 probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa PAO1]
 gi|115587197|gb|ABJ13212.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126168760|gb|EAZ54271.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719]
 gi|126196002|gb|EAZ60065.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192]
 gi|218770005|emb|CAW25767.1| probable permease of ABC taurine transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 272

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
             P         +R +    +    ++   A    W  + ++       + L  +W    
Sbjct: 13  PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72

Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + 
Sbjct: 73  LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V       L+      LL+       +L    AG         +       + W+  
Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+ILP   P  +TG   A G  W+  + +E+ +         GLG  +  + +  +   
Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242

Query: 555 VVLG 558
           VV+G
Sbjct: 243 VVVG 246



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L  
Sbjct: 75  ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  I+ +    +  +    +  + R   +  R    S WQ
Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +    
Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +L +  +   ++   + + R    W
Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271


>gi|167033283|ref|YP_001668514.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166859771|gb|ABY98178.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 251

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +V      +V   IW   +++ R++V +++A +I +P+G+ +G   H+ +   P  
Sbjct: 44  TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAF 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L       + P+VV  +       +  +  L+ F   W IL N  AG       + ++
Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDARWLQL 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + S   T W     +I+PG+  + +TG   A G  W   +  E+         + GLG +
Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I ++ ++ ++ E++  VL++      L+  
Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+     P   +  +   L    +  +   +  R+L  ++++LL       L    R L 
Sbjct: 34  GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLIGVPLGLLVGSYRHLE 93

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P    ++ I  L ++   V+             +    F +  + +W +  +    
Sbjct: 94  AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +     ++SRS   + W+    + VP  +  ++  + +++   W  +V  EM+ V  
Sbjct: 146 VRQLDARWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 G+G +I           ++  +L +  + F+ D L
Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240


>gi|124266119|ref|YP_001020123.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1]
 gi|124258894|gb|ABM93888.1| nitrate ABC transporter, permease protein, putative [Methylibium
           petroleiphilum PM1]
          Length = 274

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 101/260 (38%), Gaps = 10/260 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           + L R+            +      R    L      +    A     ++   ++ +  Y
Sbjct: 11  RVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGY 70

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +  Y+      ++ RV+     A +I IP+G+ +     +   + P  +LL   P   +
Sbjct: 71  WESWYL------SLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAW 124

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P  +     +     + ++ +   G  + I+ NV+ GA +    + + A +   + W  
Sbjct: 125 VPASII----FWPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDI 180

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R ++LP   P  V G+    G  W   + +E+ S G       GLG +I  S   GS+ 
Sbjct: 181 FRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE 240

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++V+G++ +     A +  L
Sbjct: 241 QIVVGMISIGIAGFACSEAL 260



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 15/257 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGI-------INILLHGIQETTVPRDIVDIVPITLDVHSLP 62
            +SR     I  L AFV++  +       +   L  I +   P  ++      L      
Sbjct: 12  VLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGYW 71

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    + +R+L+    ++L       + A S+ +  V+ P  ++++ IP L ++  ++++
Sbjct: 72  ESWYLSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASIIF 131

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +          AE++  F  F    + +  ++     +I     + +++   S W  F  
Sbjct: 132 W--------PTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDIFRR 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +V    + M   W  VVA+EMI  G       G+G +I  +        I+
Sbjct: 184 VVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYEQIV 243

Query: 243 YAMLTMLGVIFLYDQLL 259
             M+++    F   + L
Sbjct: 244 VGMISIGIAGFACSEAL 260


>gi|317121330|ref|YP_004101333.1| binding-protein-dependent transporters inner membrane component
           [Thermaerobacter marianensis DSM 12885]
 gi|315591310|gb|ADU50606.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter marianensis DSM 12885]
          Length = 356

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 25/259 (9%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI---------------VNH 370
                   L   +R   +    W  ++  +A+ + W+ +  +               V  
Sbjct: 91  RGRGTGAGLTWRRRRPVLGRERWLSILSPIAMLLIWEILVRLGWLDARFFPPPSRVAVRF 150

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +     I++ RV++     ++  + +G+ +G  P + + ++P    L   P 
Sbjct: 151 ADMVADGTLFHHLGISLMRVILGFAAGAVPAVAIGLTMGLFPWVRAVLEPVVAALYPIPK 210

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL++            +  + +  G    +L N +AG       + +VA +F  + 
Sbjct: 211 IALLPLLLMIFGVGET----FKVVTIALGCFTLVLVNTVAGVVNIERIYVDVARNFGASR 266

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             ++R +  PG  P    G     G +    + +E+          +GLG  I  S +  
Sbjct: 267 LDFYRTVAWPGALPMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVW 320

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               + +G+++M  F    
Sbjct: 321 DMAAMYIGLVLMSFFGYVF 339



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 98/272 (36%), Gaps = 18/272 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHS 60
             +    P + R  + +I   +A +L+  I+  L     +    P  +       +   +
Sbjct: 99  LTWRRRRPVLGRERWLSILSPIAMLLIWEILVRLGWLDARFFPPPSRVAVRFADMVADGT 158

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   + +R++       +              +  VL P++  +  IP +  L   +
Sbjct: 159 LFHHLGISLMRVILGFAAGAVPAVAIGLTMGLFPWVRAVLEPVVAALYPIPKIALLPLLL 218

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F      KV+   L     +          +    + NI R   +V+R+F  S    +
Sbjct: 219 MIFGVGETFKVVTIALGCFTLVLV--------NTVAGVVNIERIYVDVARNFGASRLDFY 270

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P ++P +   + + M      +VA+EMI          G+G  I  + +  D+ A
Sbjct: 271 RTVAWPGALPMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVWDMAA 324

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           +   ++ M    +++      L R ++ W  +
Sbjct: 325 MYIGLVLMSFFGYVFTMALNELERVVLPWRPR 356


>gi|123441275|ref|YP_001005262.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088236|emb|CAL11025.1| glycine betaine/L-proline transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 393

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 138 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 197

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 198 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 255 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 309

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 100 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 145

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 146 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 198

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 199 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 255 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 314

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360


>gi|21241618|ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106977|gb|AAM35736.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 283

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F   + + + L         P   +           L  +   + LR+L+   I    
Sbjct: 34  LVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASVLRVLAGFSIGAGL 93

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SR L  +L P    ++++P L ++   +++            E   I  I
Sbjct: 94  GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +   +   L  + R L E+  S+ LS  +    + +P ++P +   +  S+S 
Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W F+VA+E+I          G+G  ++   +      ++ A++ +  +  L D LL
Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256



 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 98/261 (37%), Gaps = 14/261 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372
            R    +    P   L+L ++     +  +F+  +    A+G     +      I+    
Sbjct: 6   LRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLA 65

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            +    +      ++ RV+    I + + + VG+ +G    +   + P  Q L A P+  
Sbjct: 66  DEASRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL++  +             L+  G  + +   V++G         E+  S+ ++  R
Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I+LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E    
Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  ++++       +  L
Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256


>gi|297195393|ref|ZP_06912791.1| glycine betaine ABC transport system permease [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719237|gb|EDY63145.1| glycine betaine ABC transport system permease [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 874

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L  GI+ ++   ++             + +D   L + A  T   +L A +++L+    
Sbjct: 49  LLFAGILAVVAWWLRGLLAGVLAFAGFAL-IDSIELWEDAMSTLSLVLVATLVTLVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A++SR +  ++ P+LD MQ++P + +L   +++F     G V G     IFA+   
Sbjct: 108 LGIWASRSRTVSTIVRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFALPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDEELVEAAEAFGTTPRSTLLRVQLPLALPTIMAGINQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVILAMYLDRM 265



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 12/234 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           + +   ++          LS     +   +  +                   +  + W+ 
Sbjct: 3   RIHLGDWVDSGVDWLQRHLSWLFDAISSLVTGMYDGIDAALSAPAPLLFAGILAVVAWW- 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +   +A  +A+     I +   ++D +        T+  V+V  ++  +I +P+GIW   
Sbjct: 62  LRGLLAGVLAFAGFALIDSIELWEDAMS-------TLSLVLVATLVTLVIAVPLGIWASR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S+ ++P    +   PA V+    +       +   +   +          +     
Sbjct: 115 SRTVSTIVRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----ALPPGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           G      +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 171 GIRQVDEELVEAAEAFGTTPRSTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|251790215|ref|YP_003004936.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247538836|gb|ACT07457.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 566

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 86/570 (15%), Positives = 183/570 (32%), Gaps = 82/570 (14%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           L P ++RRI   +   LA +L+  + + L     +       V    ++L    L     
Sbjct: 57  LTPRLTRRIVAPLLLPLAVLLLWSLSSTLGWMPPQILPAPSRVAATAVSLLQGDLLSQLL 116

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R++S +   +L   +   L   S R   +L P +  +  IP LG++   +V F   
Sbjct: 117 ISLHRLVSGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWVPLFMVLFGID 176

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+          +  + +  +T    + + ++P  L +V+R+       +   L +P
Sbjct: 177 DGLKLA--------VLIKAVIVPVTLHSQRGVRDVPPALLDVARTL---RLTRLTRLILP 225

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P     + +++S  W  ++  E++          GIG  +    +   L  +L  + 
Sbjct: 226 AALPVWFTGLRLALSQAWVSLIVVELLASSQ------GIGYLMVWGRQLFQLDIVLVCIA 279

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            +     L                                                W   
Sbjct: 280 VIGLTGLLM----------------------------------------------EWGIN 293

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVVCGVAIGIAWQ 362
                 +      +G +R     + + L     +  +  +     W   +     G   +
Sbjct: 294 QLDQRLIAWPHPPVGRLRAAPAGHAIGLVIPLLLLALWQLASHHGWVDALLLPPPGEVLR 353

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +I   V   +  D +        +++R +    +     +  G+ +G      +   P  
Sbjct: 354 AIWQGVRDGSLPDAMRH------SLWRALAGGALGISAGLLAGLALGLSTRAEAVFTPTL 407

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            LL       + PL+ + V     N +      +     + +L     G        +EV
Sbjct: 408 TLLRQVALFAWLPLITAWVG----NDDGGKVTFIALVAFFPMLVATHRGVHRRSLALQEV 463

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    +   R  R +ILP   P   TG   A   AW  +I +E            G+G+ 
Sbjct: 464 AQVLRLPWLRRLRLLILPDAAPALFTGLRLAMIYAWLGAIGAEYFMSSG-----AGIGSL 518

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + +    P ++ G+L++      ++  
Sbjct: 519 MINAQQLLDMPIILSGMLLIGVTGTLIDSL 548



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 16/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +++  +   +   SLP     +  R L+   + +    +       S R   V  
Sbjct: 345 LPPPGEVLRAIWQGVRDGSLPDAMRHSLWRALAGGALGISAGLLAGLALGLSTRAEAVFT 404

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +++ + +  +L     +  N   GKV    L A F         M  + ++ +   
Sbjct: 405 PTLTLLRQVALFAWLPLITAWVGNDDGGKVTFIALVAFF--------PMLVATHRGVHRR 456

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L+EV++  RL   ++   L +P + P L   + ++M   W   + +E  +       
Sbjct: 457 SLALQEVAQVLRLPWLRRLRLLILPDAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA--- 513

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268
             GIGS +  A +  D+  IL  ML +     L D L   L + M  W N
Sbjct: 514 --GIGSLMINAQQLLDMPIILSGMLLIGVTGTLIDSLGQRLEQRMTRWRN 561


>gi|294341848|emb|CAZ90277.1| putative Nitrate transport permease protein nrtB [Thiomonas sp.
           3As]
          Length = 285

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 13/269 (4%)

Query: 314 KKLCRTLGVIRFHFPEN-FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            +  ++   IR   P   ++ L  +  V  ++   W      +        +  + +   
Sbjct: 23  GQRWQSRLRIRAAIPRWVYIVLSISGFVLPLIAWQWIAASGWMGSLFLPSPLDVVHSFVD 82

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     I+++RVV+  ++A+ I +P+GI+IG      + +QP    +   PA+ 
Sbjct: 83  WTQNG-LSNDTLISIYRVVMGFVLAAAIGVPLGIYIGAYKWFEALLQPVNDFVRYMPASA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F PLV+  V     +       ++  G  + I+  V       P ++ EVA +       
Sbjct: 142 FIPLVLLWVGIGEGSK----IAIIFIGVIFQIIVMVADAVRRVPENYLEVAYTMGARQGE 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             + +I  GI P  +       G AW   +V+E+ +        +GLG  I +S    + 
Sbjct: 198 VMQLVIWRGILPELLDILRINMGWAWTYLVVAEMVA------ANSGLGFQILQSQRFLNT 251

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           P++ +G+ I+    L  +   +  +Y   
Sbjct: 252 PKIFVGIFIIGLIGLLFD-LAFRWIYRLA 279



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 79/219 (36%), Gaps = 15/219 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G      P D+V    +    + L      +  R++   V++              +   
Sbjct: 66  GSLFLPSPLDVVHSF-VDWTQNGLSNDTLISIYRVVMGFVLAAAIGVPLGIYIGAYKWFE 124

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +L P+ D ++ +P   F+   +++       K        I  IF   ++ +   +  +
Sbjct: 125 ALLQPVNDFVRYMPASAFIPLVLLWVGIGEGSK--------IAIIFIGVIFQIIVMVADA 176

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +P +  EV+ +      +    +     +P L+  + ++M   W ++V +EM+    
Sbjct: 177 VRRVPENYLEVAYTMGARQGEVMQLVIWRGILPELLDILRINMGWAWTYLVVAEMVAANS 236

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                 G+G  I  + +  +   I   +  +  +  L+D
Sbjct: 237 ------GLGFQILQSQRFLNTPKIFVGIFIIGLIGLLFD 269


>gi|21623830|dbj|BAC00966.1| ABC-type transporter membrane permease component [Pseudomonas
           putida]
          Length = 279

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 94/278 (33%), Gaps = 15/278 (5%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P++       R    +R   P  ++   +   +     +             +   I   
Sbjct: 7   PVTGKRNAHHRPAAKLRRPLPTRWISTLTLASLLLAWWLVTAAGWIEPLFLPSPADILSK 66

Query: 368 VNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                 Q  +          ++ R+ V ++ A++  IPVGI IG+       + P  +  
Sbjct: 67  AGTLLTQGYMDASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFY 126

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL+V       L+      LL+       I      G           A S
Sbjct: 127 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 182

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  +  
Sbjct: 183 LGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 236

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           + +      VVLG+L++     AL    R L   L  +
Sbjct: 237 AAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 26/273 (9%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59
            P    RR  P  +     +  + +   L+             P DI+      L     
Sbjct: 17  RPAAKLRRPLPTRWISTLTLASLLLAWWLVTAAGWIEPLFLPSPADILSKAGTLLTQGYM 76

Query: 60  --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             SL Q+   +  R+  A++ + L           +R    +L P+++  + IP L +L 
Sbjct: 77  DASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++            EL+ +  I+ +    +  +    +  +       ++S   +  
Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKA 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +   
Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242

Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
              ++  +L +  + F  +   + L R ++ W 
Sbjct: 243 TDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275


>gi|296387539|ref|ZP_06877014.1| taurine ABC transporter permease [Pseudomonas aeruginosa PAb1]
          Length = 262

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
             P         +R +    +    ++   A    W  + ++       + L  +W    
Sbjct: 3   PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 62

Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV++ +  A +  IP+G+ +G  P   + + P  +     P   + 
Sbjct: 63  LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 122

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V       L+      LL+       +L    AG         +       + W+  
Sbjct: 123 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 178

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+ILP   P  +TG   A G  W+  + +E+ +         GLG  +  + +  +   
Sbjct: 179 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 232

Query: 555 VVLG 558
           VV+G
Sbjct: 233 VVVG 236



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   + LR+L A+  ++L       L   +   G  L P+++  + IP L +L  
Sbjct: 65  ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 124

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  I+ +    +  +    +  + R   +  R    S WQ
Sbjct: 125 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 176

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +    
Sbjct: 177 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 230

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +L +  +   ++   + + R    W
Sbjct: 231 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 261


>gi|83950286|ref|ZP_00959019.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius nubinhibens ISM]
 gi|83838185|gb|EAP77481.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius nubinhibens ISM]
          Length = 513

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 97/234 (41%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + + ++  + +          +   +   L +    Q A  T   +++A +I ++F   
Sbjct: 289 PITMAVLLFVAYRTAGPRTAIFVGASLA-YLALFGFWQTAMDTMSLVVAASIICVVFGLP 347

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                +KSRR   ++ PILD+MQ+IP   +L   + +F     GK  G     IFA+   
Sbjct: 348 LGIWVSKSRRGKAIITPILDVMQTIPSFVYLLPAIAFFS---IGKPPGILATVIFAMP-- 402

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  +P + +E + +F  +  Q    + +P +MP ++  +   +     
Sbjct: 403 ---PMVRLTALGILQVPENTKEAALAFGANPRQLLTKVELPLAMPSIMTGINQVVMMSLS 459

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + +I  G       G+G  +  A++  +    + A + +  +  + D+++
Sbjct: 460 MVVVAALIGAG-------GMGYIVTEALENTETGRGVLAGIGIALLAMMIDRVV 506



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 11/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L   ++  V     I    ++         ++  ++     Y  +         TM 
Sbjct: 273 RGMLGAITSVFVGTPWPITMAVLLFVAYRTAGPRTAIFVGASLAYLALFGFWQTAMDTMS 332

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            VV   II  +  +P+GIW+       + I P   ++   P+ V+    +  ++++ +  
Sbjct: 333 LVVAASIICVVFGLPLGIWVSKSRRGKAIITPILDVMQTIPSFVYL---LPAIAFFSIGK 389

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +   +IF     ++     G    P + KE A +F     +    + LP   P  +T
Sbjct: 390 PPGILATVIF-AMPPMVRLTALGILQVPENTKEAALAFGANPRQLLTKVELPLAMPSIMT 448

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       + +  +V+ +   G       G+G  + E+ E       VL  + +    + 
Sbjct: 449 GINQVVMMSLSMVVVAALIGAG-------GMGYIVTEALENTETGRGVLAGIGIALLAMM 501

Query: 569 LNRFL 573
           ++R +
Sbjct: 502 IDRVV 506


>gi|317049860|ref|YP_004117508.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316951477|gb|ADU70952.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 277

 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 15/263 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
             F    +   L     +     +    ++  + +    Q +  ++   + Q  +     
Sbjct: 20  WPFSRQLSLSLLSVALLLLVWWGVTALGLIAPLFLPAPQQVLKKLLLIASPQGFMDATLW 79

Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R++V +  A++I IPVGI +G  P I   + P  +L    P   + PL+V  
Sbjct: 80  QHLGASLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIW 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +      LL+       +  + +AG           A +   T W+  R++ILP
Sbjct: 140 FGIGETSK----ILLIYLAIFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+L
Sbjct: 196 GALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIL 249

Query: 561 IMCCFVLALN---RFLWHPLYLY 580
           ++     +L    R L   L  +
Sbjct: 250 VIALIAFSLELGLRALQRRLTPW 272



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 101/244 (41%), Gaps = 17/244 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V  +G+I  L     +  + + ++   P      +L Q+   +  RML A+  + L    
Sbjct: 43  VTALGLIAPLFLPAPQQVLKKLLLIASPQGFMDATLWQHLGASLARMLVALFFAALIGIP 102

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                  S  +  +L P++++ + +P L +L   V++F           E + I  I+ +
Sbjct: 103 VGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLA 154

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +T S    + N  +     +++   + WQ   ++ +P ++P ++  + + +  GW 
Sbjct: 155 IFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILPGALPEILTGLRIGLGVGWS 214

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
            +VA+E+I          G+G  +  A +      +L  +L +  + F  +   + L R 
Sbjct: 215 TLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGILVIALIAFSLELGLRALQRR 268

Query: 263 MIVW 266
           +  W
Sbjct: 269 LTPW 272


>gi|170724167|ref|YP_001751855.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762170|gb|ACA75486.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 260

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 20/244 (8%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
           +F Q+ ++ ++   L  F +       +  AWQ +              V+     ++ R
Sbjct: 20  SFWQVAASAKLDLGLFSFTYVPTPRAVLDAAWQLLTSSA----------VLAHLGSSLSR 69

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V     +A+++ + +G+ IG        + P  ++L   PA  + PL +       L+  
Sbjct: 70  VFAGYSVAALLGVALGLLIGRSQWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS-- 127

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  +   G  + IL N + G  A        A S     W   R ++LPG  P  VTG
Sbjct: 128 --MVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTG 185

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G +W   + +E+ S         G+G Y  ES    ++P++++G+L++    +  
Sbjct: 186 LAIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTLQNYPDIIVGMLLIGVLGMGS 239

Query: 570 NRFL 573
           +  +
Sbjct: 240 SALV 243



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 93/228 (40%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ L        PR ++D     L   ++  +   +  R+ +   ++ L       L  
Sbjct: 30  LDLGLFSFTYVPTPRAVLDAAWQLLTSSAVLAHLGSSLSRVFAGYSVAALLGVALGLLIG 89

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S+     L+P L++++ IP + ++   ++ F          +EL+ +F  FT  ++ + 
Sbjct: 90  RSQWAEDTLLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMVFITFTGALFPIL 141

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   +RS     W     + +P ++P +V  + + M   WF +V +E
Sbjct: 142 LNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAE 201

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI          GIG Y   +   Q+   I+  ML +  +      L+
Sbjct: 202 MISG------QFGIGYYTWESYTLQNYPDIIVGMLLIGVLGMGSSALV 243


>gi|83950025|ref|ZP_00958758.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
 gi|83837924|gb|EAP77220.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
          Length = 424

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV  +I +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 231 GYSLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGI 290

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     +G S         A S   + W+  RY+I+P   
Sbjct: 291 GEAGK----IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQIMRYVIIPNSL 346

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           P   TGA  A G  W   + +E+ +         G G  I  ++   +  
Sbjct: 347 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMVASRFQNTD 390



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R++   +I  L           S        PI++ M+ +P L  +   
Sbjct: 225 TLWEHLGYSLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLV 284

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W M  +    +  +       + S   S WQ 
Sbjct: 285 IIWFGIGEAGK--------IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQI 336

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             Y+ +P S+P +     ++M   W  VVA+E++          G G  I +A + Q+  
Sbjct: 337 MRYVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMVASRFQNTD 390

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++  ++ +  + F  D L+    R ++ W  +
Sbjct: 391 IVILGIILIGVIGFGIDMLMRWAERVLVPWKGR 423


>gi|45358760|ref|NP_988317.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|45047626|emb|CAF30753.1| transport permease protein [Methanococcus maripaludis S2]
          Length = 253

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 14/247 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386
           +++  N  +  +  + W  +   +   +    +  +++      V  +     I    ++
Sbjct: 1   MKILKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVS 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + RV++   IA    IP+G+ +G+   I+       +LL   P   + PL ++       
Sbjct: 61  IKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGES 120

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           + +     ++  G  + IL N I+G  + P    E A +   +     + +++P   P  
Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDI 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG     G AW   + +E+           GLG  I  +        VV  ++I+    
Sbjct: 177 LTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNIVVASMIIIGIIG 231

Query: 567 LALNRFL 573
           + L++ L
Sbjct: 232 IILDKGL 238



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+L    I+  F      L      +  +    +++++ IP L +
Sbjct: 48  LGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F                F IF    + +  +    + ++P  + E +++   S
Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + VP S P ++  + +     W  VVA+EM+   D      G+G  I  A   
Sbjct: 160 TKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ +M+ +  +  + D+ L
Sbjct: 215 SKMNIVVASMIIIGIIGIILDKGL 238


>gi|239624587|ref|ZP_04667618.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520973|gb|EEQ60839.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 273

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     ++   +    +A II  P+G+ +G+   +   + P  +L+   PA  +
Sbjct: 70  PDGATLMQNLFASLRLSLSGFGMAIIIGTPLGLLMGWYKPVQKLVNPIFELIRPIPAIAW 129

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +       NL  S ++ F     I+ N   G       +   + +   + W  
Sbjct: 130 IPLIILVLGIG----NLAKSFIIFFAAFVPIVINSYTGIRQVNKTYVNFSRTCGASNWTI 185

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + +P   P    G   + G AW+  + +E+ +         GLG  I    + G   
Sbjct: 186 FLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEMLA------SDRGLGYMILMGRQYGKIN 239

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G+ ++    + L   L
Sbjct: 240 IILMGMAVIGVVGVILYALL 259



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + D  +L Q    +    LS   ++++       L    + +  ++ PI ++++ IP + 
Sbjct: 69  SPDGATLMQNLFASLRLSLSGFGMAIIIGTPLGLLMGWYKPVQKLVNPIFELIRPIPAIA 128

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   ++              LA  F IF +    +  + Y  +  + +     SR+   
Sbjct: 129 WIPLIILVLGIGN--------LAKSFIIFFAAFVPIVINSYTGIRQVNKTYVNFSRTCGA 180

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S W  F  +GVP S+P +     +S+   W  +VA+EM+          G+G  I +  +
Sbjct: 181 SNWTIFLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEMLA------SDRGLGYMILMGRQ 234

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              +  IL  M  +  V  +   LL
Sbjct: 235 YGKINIILMGMAVIGVVGVILYALL 259


>gi|157371969|ref|YP_001479958.1| glycine betaine transporter membrane protein [Serratia
           proteamaculans 568]
 gi|157323733|gb|ABV42830.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 374

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +++      +V  I +        A  T   +L+A+   +
Sbjct: 119 LLGMPAPIAILLFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFCI 178

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+  G V+ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 179 VIGLPLGIWLARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 235

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 236 A-----LPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 290

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 291 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 341



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 26/291 (8%)

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
            +WV +    T+ + ++       F  +   V  +      +    P             
Sbjct: 77  KTWVPFDSWVTHGIDWLVLHFRPLFQGIRVPVDFILSGFQQLLLGMPAPI---------- 126

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             + +F        ++G+   ++  ++           +    +T+  V+  +    +I 
Sbjct: 127 -AILLFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAM----VTLALVLTALFFCIVIG 181

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GIW+    H    I+P    +   PA V+   +V          N+   ++ I    
Sbjct: 182 LPLGIWLARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFAL 237

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+   I G    P D  E A SF  +  +    + LP   P  + G       A +  
Sbjct: 238 PPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMV 297

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 298 VIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 341


>gi|332704984|ref|ZP_08425069.1| ABC-type proline/glycine betaine transport system, permease
           component [Lyngbya majuscula 3L]
 gi|332356161|gb|EGJ35616.1| ABC-type proline/glycine betaine transport system, permease
           component [Lyngbya majuscula 3L]
          Length = 678

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   +++A+V  +L         A S R+   L P+LD MQ++P   +L   V+
Sbjct: 115 WEQAMTTLALVVTAVVFCVLIGISLGIACASSDRVEKFLRPLLDAMQTLPSFVYLVPVVM 174

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FA+       +       +  +  ++ E + +F  +  Q  W
Sbjct: 175 LFG---IGAVPGVIATLVFAVP-----PLIRLTNLGIRQVSTEVVEAAIAFGSTPRQMLW 226

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +  ++       V + MI VG       G+G  +   +   ++   
Sbjct: 227 EVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQGLGRVNVGLA 279

Query: 242 LYAMLTMLGVIFLYDQL 258
               L+++ +  + D++
Sbjct: 280 AVGGLSIVLIAVMLDRI 296



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 86/279 (30%), Gaps = 22/279 (7%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           ++  +     + F P    +      +          FL +     +  +  I W     
Sbjct: 40  WITAVVNFLVDNFRPFFQAISLP---ITWTLEGIQSLFLSIPPLIFLIILALIVWQIAGG 96

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +AI   +          T             T+  VV  ++   +I I +GI       
Sbjct: 97  KIAIYSLFA--------LTLIGFFGAWEQAMTTLALVVTAVVFCVLIGISLGIACASSDR 148

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   ++P    +   P+ V+   VV       +   +   +         ++     G  
Sbjct: 149 VEKFLRPLLDAMQTLPSFVYLVPVVMLFGIGAVPGVIATLVF----AVPPLIRLTNLGIR 204

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  E A +F  T  +    + +P   P  + G   A   A + S+V+ +   G   
Sbjct: 205 QVSTEVVEAAIAFGSTPRQMLWEVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG--- 261

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  + +   + +     +G L +    + L+R 
Sbjct: 262 ----GLGQMVLQGLGRVNVGLAAVGGLSIVLIAVMLDRI 296


>gi|145594188|ref|YP_001158485.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145303525|gb|ABP54107.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 664

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 83/590 (14%), Positives = 190/590 (32%), Gaps = 52/590 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L   +   I++  +     +L ++ V+ +++ +        V         +   +  L 
Sbjct: 90  LVTFVQGLIAQPAYGRPVPVLGWLGVVALVSYVSWAFANWRVGLLAAGGFTL-FGLQGLW 148

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q +  T    L A+ +SLLF      LA  S R   ++ P+LD+MQ++P   +L    + 
Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGVSDRFHRMITPVLDLMQTMPTFVYLAPLTLV 208

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+            +A  A     +          + ++P    E + SF  +  Q+   
Sbjct: 209 FLIG--------PASATIATLIYAMPPAIRITAHGIRSVPAPPVEATDSFGATRRQRLTK 260

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+    
Sbjct: 261 ALLPLSKRTIVLGVNQTIMAALAMVTVAALI-------DAPGLGKTVIKALQTTDVGTAF 313

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD----------------SWVL 286
            A + ++ +  + D+      +  +   R E+  G                     S++ 
Sbjct: 314 NAGVAIVVMAIVLDR------VTTAASIRAEQGGGESSPRIRRLLLAGFGLVAAVCSYLS 367

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
           Y +   +     G          +         L  +     +       N   + + + 
Sbjct: 368 YTYLWASEFPDGGQLGEYLSQGATAVTTWAQNNLSDVTAAVKDGVTIALLNPLEALLAES 427

Query: 347 FWFCVVCGVAIGIA----WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            W+ +   + +  A     ++               +     IT+   +V  ++   + +
Sbjct: 428 PWWLMGAVIVVLAALIGNLRTAAVAAVCVGLLVGSGLWNASMITLAMTLVATLLVVTLGV 487

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            VG+W+G        I+P        PA V+   VV+  S    +  +   +        
Sbjct: 488 VVGVWMGRSSRADRIIRPVLDAGQTMPAFVYLIPVVALFSVSRFSAIVAGVVYAAPVA-- 545

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +  V  G  A P    E A++     W+    + LP      +           +  +
Sbjct: 546 --IKIVADGVRAIPESTVEAATAAGSNSWQTITKVQLPMARQSLMLATNQGLIYVLSMVV 603

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +   G +          +A  ++   + + +   + +    + L+R 
Sbjct: 604 IGGLVGAGALGYEV------VAGFSQGQLYGKGLAAGVAIVVLGIMLDRI 647


>gi|322831482|ref|YP_004211509.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321166683|gb|ADW72382.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 399

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83
               I I+   L   Q          +V + L         A  T   +L+++   +L  
Sbjct: 147 LPAPIAILVFALLAWQMAGFGMGAATLVSLVLIGAIGAWSQAMVTLALVLTSLFFCILIG 206

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA  
Sbjct: 207 LPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 261

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +P DL E ++SF  S  Q  + + +P +MP ++  +  ++   
Sbjct: 262 ---LPPVVRLTILGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLMLA 318

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI VG       G+G  +   I   D+         ++ +  + D+L
Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGAGIVILAIILDRL 366



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           + L+     +   V   +AWQ  G+ +   T   ++ +  +G      +T+  V+  +  
Sbjct: 142 HGLESLPAPIAILVFALLAWQMAGFGMGAATLVSLVLIGAIGAWSQAMVTLALVLTSLFF 201

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             +I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ 
Sbjct: 202 CILIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVT 257

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      ++   I G +  P D  E A SF  +  +    + LP   P  + G       
Sbjct: 258 IIFALPPVVRLTILGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLML 317

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ + + G       GLG  +     +       +G   +    + L+R 
Sbjct: 318 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGAGIVILAIILDRL 366


>gi|218890352|ref|YP_002439216.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218770575|emb|CAW26340.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 274

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 109/284 (38%), Gaps = 23/284 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55
           + L   +     R   P  +   A  L+       ++ +      +   P  I+  + + 
Sbjct: 6   LRLARRVSRRAWRLRVPGTWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   +  R+ +   I      V  T    SRR    L P    +++IP L +
Sbjct: 65  LARGELWGHVGASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F      K++   L A F ++         ++   +  + R   E+ R +RLS
Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P ++P L   +  ++S  W F+VA+E+I          G+G  ++   + 
Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276
                ++ A+L +  +  L D L   L R  + W + F  E   
Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368
              +++ R    +R         L      S+  ++ + W       A      ++  + 
Sbjct: 7   RLARRVSRRAWRLRVPGTWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +  V         ++ RV     I S + + VG W+G      + ++P  Q L A 
Sbjct: 67  RGELWGHVG-------ASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAI 119

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL++               +L+  G  + +   ++AG       + E+   + +
Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + +   R I+LP   P   TG   A   +W   + +E+ +       T GLG  +++  E
Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 V+  +L++       +  L
Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254


>gi|318606880|emb|CBY28378.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 393

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 138 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 197

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 198 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 255 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 309

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 100 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 145

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 146 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 198

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 199 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 255 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 314

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360


>gi|254247922|ref|ZP_04941243.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124872698|gb|EAY64414.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 291

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 105/285 (36%), Gaps = 28/285 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366
           ++  +  + R L               + +R + M    W    +   +A+  A      
Sbjct: 1   MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60

Query: 367 IVNHFTYQDVLYVIWLG----------------CITMFRVVVLIIIASIIWIPVGIWIGF 410
            +   T+ +V     +G                  ++ RV+   + A++  I +G+ IG 
Sbjct: 61  SLGIVTFANVPAPADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGR 120

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P  ++L   PA  + PL +       L+    +  +   G  + IL N + 
Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA A        A S    G   +  +ILPG  P   TG     G AW   + +E+ +  
Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +      G+G +  ES    ++P++V+G+ ++    +  +  +  
Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+  V + +          
Sbjct: 60  LSLGIVTFANVPAPADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|170733335|ref|YP_001765282.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169816577|gb|ACA91160.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 291

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 28/285 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366
           ++  +  + R L               + +R + M    W    +   +A+  A      
Sbjct: 1   MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60

Query: 367 IVNHFTYQDVL----------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
            +   T+ +V                  +      ++ RV+   + A++  I +G+ IG 
Sbjct: 61  SLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGR 120

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P  ++L   PA  + PL +       L+    +  +   G  + IL N + 
Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           GA A        A S    G   +  +ILPG  P   TG     G AW   + +E+ +  
Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +      G+G +  ES    ++P++V+G+ ++    +  +  +  
Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+  V + +          
Sbjct: 60  LSLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|126740290|ref|ZP_01755979.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718745|gb|EBA15458.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 660

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 87/544 (15%), Positives = 171/544 (31%), Gaps = 54/544 (9%)

Query: 12  SRRIFP--NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            +R +P        A   V G+I   L G +       +     I   +    + A +T 
Sbjct: 98  GKRRWPYLGPVPWAAVAGVAGVIGYALGGWRLAA----LGAGTFIWTALIGQWKMAMQTM 153

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +  A  ++          A K   +  VL P+L ++Q++P   +L   V++F     G
Sbjct: 154 SVLTVAAPLAFAIGLGLGIAAWKFAWVERVLKPMLSVLQTLPFFTYLLPAVIFFKV---G 210

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              GA    IFAI       M       L  +  ++ E  +    S WQ   ++ VP + 
Sbjct: 211 PTAGAVATVIFAIP-----PMILMTTLGLKKVSPEVIEAGKMSGCSRWQMLRHVYVPAAR 265

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  +          ++    +VV    I +PG+G+ +   +    L       +T++
Sbjct: 266 TEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVTIV 318

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309
            +    D++       W  K   +          W+ +    T    F+G+       P+
Sbjct: 319 LLAVTLDRMS----KAWVVK---QPVHFEKGTPWWIRHRMVLTALGVFLGFILLAQLFPI 371

Query: 310 SNNVKK----------------------LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
             ++ +                      +      +R+      L    +  +S     F
Sbjct: 372 LGSIGRKQHFSQGKEIDVLIKGFLALDGIRAVTEWLRWFLNVKVLIPFRDTLLSIPTPAF 431

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              VV         +   +    FT            IT++ V+  +++A +I IP+GI 
Sbjct: 432 ILMVVSFSYWLGGRRPAVFAAIFFTIVAFSGWWDRSIITLYAVISAVVLAMMIGIPLGIL 491

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                  S ++         FP+ ++    +       +     + +        Y    
Sbjct: 492 ASRSEAWSRRVLLACDTAQTFPSFIYLIPAIMLFGVNDVAVVFSILIFATVPLTRY---- 547

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G    P +  E A     T  +    + LP   P    G   A   A+   I++   
Sbjct: 548 TVEGLRTVPPEMTEAADMSGSTRRQKLLSVQLPLALPTMAVGFNQAIMFAFFMVIIAAFI 607

Query: 528 SWGH 531
               
Sbjct: 608 GTQD 611



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 77/201 (38%), Gaps = 19/201 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++SA+V++++       LA++S      ++   D  Q+ P   +L   ++ F    
Sbjct: 470 TLYAVISAVVLAMMIGIPLGILASRSEAWSRRVLLACDTAQTFPSFIYLIPAIMLFGVN- 528

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  ++A +F+I       +T    + L  +P ++ E +     +  QK   + +P 
Sbjct: 529 -------DVAVVFSILIFATVPLTRYTVEGLRTVPPEMTEAADMSGSTRRQKLLSVQLPL 581

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +      ++   +F V+ +  I   D       +G  +   +   +L       L 
Sbjct: 582 ALPTMAVGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTELGKNFVLGLN 634

Query: 248 MLGVIFLYDQLLFRPMIVWSN 268
           +  +   +D  +      W+ 
Sbjct: 635 VSLMALTFDMAI----TAWAE 651


>gi|15598644|ref|NP_252138.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107102982|ref|ZP_01366900.1| hypothetical protein PaerPA_01004051 [Pseudomonas aeruginosa PACS2]
 gi|254236402|ref|ZP_04929725.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719]
 gi|254242134|ref|ZP_04935456.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192]
 gi|9949589|gb|AAG06836.1|AE004765_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126168333|gb|EAZ53844.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719]
 gi|126195512|gb|EAZ59575.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192]
          Length = 274

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 109/284 (38%), Gaps = 23/284 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55
           + L   +     R   P  +   A  L+       ++ +      +   P  I+  + + 
Sbjct: 6   LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   +  R+ +   I      V  T    SRR    L P    +++IP L +
Sbjct: 65  LARGELWGHVGASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F      K++   L A F ++         ++   +  + R   E+ R +RLS
Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P ++P L   +  ++S  W F+VA+E+I          G+G  ++   + 
Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276
                ++ A+L +  +  L D L   L R  + W + F  E   
Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368
              +++ R    +R         L      S+  ++ + W       A      ++  + 
Sbjct: 7   RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +  V         ++ RV     I S + + VG W+G      + ++P  Q L A 
Sbjct: 67  RGELWGHVG-------ASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAI 119

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL++               +L+  G  + +   ++AG       + E+   + +
Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + +   R I+LP   P   TG   A   +W   + +E+ +       T GLG  +++  E
Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 V+  +L++       +  L
Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254


>gi|6019466|gb|AAD31786.2|AF126201_4 AtsB [Pseudomonas putida]
          Length = 535

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 74/562 (13%), Positives = 179/562 (31%), Gaps = 70/562 (12%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67
             I  R+ P  + L   + ++ ++    H + E  +P   +V    +      L  +   
Sbjct: 26  ARIGTRVLP--WVLPTLIALLWVVASHQHWMSEQILPAPSVVWQSAVEFGSGELWGHLWI 83

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+   +++ +    +  T    SRR   +++P    +  IP L ++   +++F    
Sbjct: 84  SVQRLFWGLLMGIASGLLLGTWLGTSRRAQTLVLPTFVALAQIPTLAWIPLFMLFFGIG- 142

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL  +  +  + V  +T      + +    L E + + RL     F  L +P 
Sbjct: 143 -------ELLKLVVMVKAVVVPVTLHTLVGVRDAQPKLREAAAALRLPRHLLFLRLLLPA 195

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +  + ++++ GW  ++A E++   +      GIG  +    +   L  +   +L 
Sbjct: 196 ALPAFLTGVRLALATGWTSLLAVELLASSE------GIGYLMVWGRQLFMLFMLDLVLLC 249

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           +L +                                              +G      FS
Sbjct: 250 ILVIGL--------------------------------------------VGALLEKGFS 265

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            +   +    +     +   P            + +           V   I    +  +
Sbjct: 266 TVEKRLLYWPQPATGEQQRGPIPRGWQSLLLPTALLGLWQASSSFGWVDQNILTSPLEVL 325

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F+      +     +++ R +  +++     +  G+ +G          P    L  
Sbjct: 326 RTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFGPSLSALRQ 385

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL+ +             ++ +     + +L     G ++      E A +  
Sbjct: 386 VALFAWVPLLTAWFGLGEG----AKTVFVALAAFFPLLIATQRGIASLSPQLGEAARTLR 441

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +  W+  R ++LPG  P    G   +   AW  +I +E            G+ + +  + 
Sbjct: 442 LNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFM-----PSGGGIASLMIGAQ 496

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
           +     +V+  +L++      L
Sbjct: 497 QLFRMDQVMAAMLLIGLVGALL 518



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T P +++  +   L   SLP+    +  R L+ +V+      +   L   S     V  
Sbjct: 318 LTSPLEVLRTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFG 377

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  ++     +F      K +   LAA F         +  +  + + ++
Sbjct: 378 PSLSALRQVALFAWVPLLTAWFGLGEGAKTVFVALAAFF--------PLLIATQRGIASL 429

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E +R+ RL+ WQ+   L +P + P +   + +S+   W   + +E  +       
Sbjct: 430 SPQLGEAARTLRLNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSG---- 485

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GI S +  A +   +  ++ AML +  V  L   L  + +   + ++R
Sbjct: 486 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGTL-GQRLESRATRWR 533



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 88/272 (32%), Gaps = 19/272 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           ++  + K     G +         +     RV   +      ++  VA    W S   + 
Sbjct: 1   MNGTLSKGWIGPGGLLRGLFATQGRARIGTRVLPWVLPTLIALLWVVASHQHWMSEQILP 60

Query: 369 NHFTYQDVLYVIWLGC------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                         G       I++ R+   +++     + +G W+G      + + P  
Sbjct: 61  APSVVWQSAVEFGSGELWGHLWISVQRLFWGLLMGIASGLLLGTWLGTSRRAQTLVLPTF 120

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             LA  P   + PL +       L   + +   ++         + + G        +E 
Sbjct: 121 VALAQIPTLAWIPLFMLFFGIGELLKLVVMVKAVVVPV----TLHTLVGVRDAQPKLREA 176

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A++  +     +  ++LP   P ++TG   A    W + +  E+ +       + G+G  
Sbjct: 177 AAALRLPRHLLFLRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYL 230

Query: 543 IA---ESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +    +         V+L +L++      L +
Sbjct: 231 MVWGRQLFMLFMLDLVLLCILVIGLVGALLEK 262


>gi|218532106|ref|YP_002422922.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524409|gb|ACK84994.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 305

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 10/184 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R++    +A  + IP+G+ +G    +   + P  ++    PA  + P+ +      
Sbjct: 113 MSCRRILYGFSLAGAVAIPLGLLMGRFRILREIVFPICEVTRPIPAIAWVPMAIML---- 168

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  +   G+ + IL N + G +         A          +R + LP   P
Sbjct: 169 WPTNEESIVFITFLGSFFPILINTLQGMATVDPVLVRAARCLGAGEAALFREVYLPASLP 228

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G AW + I +E+ S         G+G +  E+     + ++ LG++ +  
Sbjct: 229 QIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYSDIALGMITIGV 282

Query: 565 FVLA 568
             LA
Sbjct: 283 LGLA 286



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 89/252 (35%), Gaps = 21/252 (8%)

Query: 22  LLAFVLVIGIINI----LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           L  F+ V  ++ +              P D++    +         +   +  R+L    
Sbjct: 64  LAVFITVWQVLTVNRATFYVRFTNVPSPADVLARAVLAFHNPIFGDHIWMSCRRILYGFS 123

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++         L  + R L  ++ PI ++ + IP + ++   ++ +           E +
Sbjct: 124 LAGAVAIPLGLLMGRFRILREIVFPICEVTRPIPAIAWVPMAIMLW--------PTNEES 175

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F  F    + +  +  Q +  +   L   +R         F  + +P S+P +   + 
Sbjct: 176 IVFITFLGSFFPILINTLQGMATVDPVLVRAARCLGAGEAALFREVYLPASLPQIFTGLT 235

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---L 254
           + M   W  ++A+EMI          GIG +   A        I   M+T+  +     L
Sbjct: 236 VGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYSDIALGMITIGVLGLASSL 289

Query: 255 YDQLLFRPMIVW 266
             +L+ R  + W
Sbjct: 290 AIRLVGRIAMPW 301


>gi|293394761|ref|ZP_06639052.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291422712|gb|EFE95950.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 393

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 23/243 (9%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P+   +L F L+   ++ L  G         I  I   +         A  T   +L+A
Sbjct: 141 MPSPIAILVFSLIAWQLSSLGMGAATLVSLIAIGAIGAWS--------QAMVTLALVLTA 192

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +   ++         A+SR    V+ P+LD MQ+ P   +L   V+ F     G V G  
Sbjct: 193 LFFCIIIGLPLGIWLARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVV 249

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +  IFA+       +       +  +P DL E + SF  S  Q  + + +P +MP ++  
Sbjct: 250 VTIIFALP-----PIVRLTILGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAG 304

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  ++      VV + MI VG       G+G  +   I   D+       + ++ +  + 
Sbjct: 305 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIIL 357

Query: 256 DQL 258
           D+L
Sbjct: 358 DRL 360



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 100 PLDSWV------THGIDWLVLHFRPLFQGIRVPVDFILSGFQQLLLGMPSPI-------- 145

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    +T+  V+  +    I
Sbjct: 146 ---AILVFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAM----VTLALVLTALFFCII 198

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    H +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 199 IGLPLGIWLARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 255 ALPPIVRLTILGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 314

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360


>gi|119355995|ref|YP_910639.1| binding-protein-dependent transport systems inner membrane
           component [Chlorobium phaeobacteroides DSM 266]
 gi|119353344|gb|ABL64215.1| binding-protein-dependent transport systems inner membrane
           component [Chlorobium phaeobacteroides DSM 266]
          Length = 266

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 87/228 (38%), Gaps = 10/228 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I     + G     ++  +  ++  F       +I     ++ RV+  + +A ++ +
Sbjct: 35  VWQIASALKLFGADFSESFSPLAAMLALFEMIKNGELIHHALPSLRRVLTGLSLAVVVAL 94

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G+   I        Q +       + P+ +          ++ +  L+     W
Sbjct: 95  PLGVLVGYFKRIEQLTYVVFQFMRMISPLAWMPIAIIIFGVG----DVAVIFLLWLVAIW 150

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++ N   GA      +  +A +         R +I+P   P  +TG   A G +W   +
Sbjct: 151 PLILNTSHGAGRVSPLWVNMAKTMGAKDSGILRKVIIPAAVPDMLTGLRLAVGVSWIILV 210

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +E+           GLG +I ++ ++  + +++  ++ +      L+
Sbjct: 211 PAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMAIGMIGYLLD 252



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 95/241 (39%), Gaps = 17/241 (7%)

Query: 19  IFDLLAFVLVIGI---INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           +  ++ F++V  I   + +      E+  P   +  +   +    L  +A  +  R+L+ 
Sbjct: 26  LLGVVLFMIVWQIASALKLFGADFSESFSPLAAMLALFEMIKNGELIHHALPSLRRVLTG 85

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + ++++       L    +R+  +   +   M+ I  L ++   ++ F           +
Sbjct: 86  LSLAVVVALPLGVLVGYFKRIEQLTYVVFQFMRMISPLAWMPIAIIIFGVG--------D 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +A IF ++   +W +  +       +      ++++           + +P ++P ++  
Sbjct: 138 VAVIFLLWLVAIWPLILNTSHGAGRVSPLWVNMAKTMGAKDSGILRKVIIPAAVPDMLTG 197

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +++   W  +V +EM+ V D      G+G +I           ++  ++ +  + +L 
Sbjct: 198 LRLAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMAIGMIGYLL 251

Query: 256 D 256
           D
Sbjct: 252 D 252


>gi|167010889|ref|ZP_02275820.1| ABC-type anion transport system, duplicated permease component
           [Francisella tularensis subsp. holarctica FSC200]
          Length = 132

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/130 (37%), Positives = 74/130 (56%)

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + GT WY+LFNVI+G S  P +  E+  SFH+ G +WW    +P +FPY V G I+A GG
Sbjct: 1   MTGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGG 60

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           AWN++I +E+  WG   ++  G+GA ++ +T      +  L V+ +C  V     F+W P
Sbjct: 61  AWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKP 120

Query: 577 LYLYGTRCLR 586
           LY       +
Sbjct: 121 LYKLAETKYK 130



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 62/126 (49%)

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T   W + F++     N+P ++ E+++SF L G + ++   +P   P +V  ++ +  G
Sbjct: 1   MTGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGG 60

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W   +A+E+++ G   I + GIG+ ++       L     A++ +  ++ L    +++P
Sbjct: 61  AWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKP 120

Query: 263 MIVWSN 268
           +   + 
Sbjct: 121 LYKLAE 126


>gi|329954688|ref|ZP_08295748.1| glycine betaine transport system permease protein opuAB
           [Bacteroides clarus YIT 12056]
 gi|328527229|gb|EGF54233.1| glycine betaine transport system permease protein opuAB
           [Bacteroides clarus YIT 12056]
          Length = 275

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I  + +    ++     +  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LYGIPFYITIAVLAILAWMKSGKGTAVFTVLGLLLIYGMGFWEETMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A S R   ++ PILD MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 LLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFFGL---GTVPGAFATVIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTIMTGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V+    +
Sbjct: 39  HVLYGIPFYITIAVLAILAWMKSGKGTAVFTVLGLLLIYGMGFWEETMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ +P+GIW       +  ++P    +   PA V+    V       +       +  
Sbjct: 99  ALLLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFFGLGTVPGAFATVIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTIMTGINQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263


>gi|239986557|ref|ZP_04707221.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces roseosporus NRRL 11379]
          Length = 873

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L  GI+ ++   ++    P  ++  V   L D   L   A  T   +L A +++L+   
Sbjct: 49  LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A++S+ +  V+ P+LD MQ++P + +L   V++F     G V G     IFA+  
Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +       + +P ++P ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362
           F  PL   V      L        +    + S     ++ +L      +  G+   IAW 
Sbjct: 2   FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61

Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             G      T+     +    +W   + T+  V+V  ++  +I +P+GIW      +S+ 
Sbjct: 62  LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   PA V+    V       +   +   +          +     G      
Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|150402370|ref|YP_001329664.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
 gi|150033400|gb|ABR65513.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
          Length = 253

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 14/247 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386
           ++L  N  +  +  + W  +   +   +    +  +++      V  +     I    ++
Sbjct: 1   MKLLKNLTLPVLGILAWELLAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVS 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + RV++  +IA    IP+GI +G+   I+  +    +L    P   + PL ++       
Sbjct: 61  IERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAWVPLALAWFGIGES 120

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           + +     ++  G  + IL N I+G  + P    E A +   +     + +I+P   P  
Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVIVPASSPDI 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG     G AW   + +E+           GLG  I  +        VV  ++I+    
Sbjct: 177 LTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNVVVASMIIIGIIG 231

Query: 567 LALNRFL 573
           + L++ L
Sbjct: 232 IILDKGL 238



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+L   +I+  F      L      +  +L   +++ + IP L +
Sbjct: 48  LGTGNLIENTIVSIERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F                F IF    + +  +    + ++P  + E +++   S
Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + VP S P ++  + +     W  VVA+EM+   D      G+G  I  A   
Sbjct: 160 TKDILKSVIVPASSPDILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ +M+ +  +  + D+ L
Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238


>gi|226952054|ref|ZP_03822518.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC
           27244]
 gi|226837211|gb|EEH69594.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC
           27244]
          Length = 293

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +++        +L Q+ + +  R+L A+V ++            ++ +  VL P++++++
Sbjct: 82  LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            IP L +L   V++F           E   +  IF S +  +  S    + +   + E  
Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + S   S  Q FW++ +P ++P ++  + + +  GW  +VASE++          GIG  
Sbjct: 194 ALSLGASQSQVFWHVILPTALPHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  A +      ++  ++ +  V   ++  L
Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278


>gi|254460099|ref|ZP_05073515.1| taurine ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206676688|gb|EDZ41175.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 436

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           + WQ   ++ N   YQ    ++     ++ RV++  ++ + + +P+G  +G         
Sbjct: 220 VVWQRFVFL-NTEGYQG-FTLLEHTRYSLQRVLIGFLLGAAVGVPIGYAMGLTGWARGWF 277

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  + +   P     PL++           +   +L+     W ++    +G S     
Sbjct: 278 DPIVEFMRPIPPLALIPLIIIWFGIG----EIGKIVLLFLAALWIMIIAARSGVSGVAIT 333

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A S   + W+    +I+P   P   TGA  A G  W   + +E+ +         G
Sbjct: 334 KVHAAYSLGASKWQILGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVA------ANVG 387

Query: 539 LGAYIAEST 547
           LG  I  ++
Sbjct: 388 LGKMIVTAS 396



 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 14/173 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R+L   ++              +        PI++ M+ IP L  +   
Sbjct: 237 TLLEHTRYSLQRVLIGFLLGAAVGVPIGYAMGLTGWARGWFDPIVEFMRPIPPLALIPLI 296

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W M  +    +  +       + S   S WQ 
Sbjct: 297 IIWFGIGEIGK--------IVLLFLAALWIMIIAARSGVSGVAITKVHAAYSLGASKWQI 348

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
              + VP S+P +     ++M   W  VVA+E++          G+G  I  A
Sbjct: 349 LGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAANV------GLGKMIVTA 395


>gi|126733424|ref|ZP_01749171.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2]
 gi|126716290|gb|EBA13154.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2]
          Length = 444

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 12/217 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             W  +G  +    Y++      LG  ++FRV+V  ++ +++ IP+G  +G         
Sbjct: 228 AVWSRLG-EIATVGYRNSTLAEHLGY-SLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWF 285

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  + +   P     PLV+       +       +L+     W +     +G S     
Sbjct: 286 DPIVEFMRPVPPLALIPLVIIWAGIGEVGK----IILLFLAALWIMAIAARSGVSGVRIS 341

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A S   + W+  R++I+P   P   TGA  A G  W   + +E+ +         G
Sbjct: 342 KVHAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK------G 395

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            G  I  +++  S   V++G++++     +++  +  
Sbjct: 396 AGMMIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQ 432



 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 17/225 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           + +I  +     +L ++   +  R++   ++  L           S        PI++ M
Sbjct: 233 LGEIATVGYRNSTLAEHLGYSLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWFDPIVEFM 292

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P L  +   +++      GK        I  +F + +W M  +    +  +      
Sbjct: 293 RPVPPLALIPLVIIWAGIGEVGK--------IILLFLAALWIMAIAARSGVSGVRISKVH 344

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            + S   S WQ   ++ +P S+P +     ++M   W  VVA+E++          G G 
Sbjct: 345 AAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 398

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
            I +A K Q    +L  ++ +  + F  D L+ +    ++ W  K
Sbjct: 399 MIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQAEKWLVPWKGK 443


>gi|291443497|ref|ZP_06582887.1| LOW QUALITY PROTEIN: glycine betaine transport system permease
           protein [Streptomyces roseosporus NRRL 15998]
 gi|291346444|gb|EFE73348.1| LOW QUALITY PROTEIN: glycine betaine transport system permease
           protein [Streptomyces roseosporus NRRL 15998]
          Length = 866

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L  GI+ ++   ++    P  ++  V   L D   L   A  T   +L A +++L+   
Sbjct: 49  LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A++S+ +  V+ P+LD MQ++P + +L   V++F     G V G     IFA+  
Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +       + +P ++P ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362
           F  PL   V      L        +    + S     ++ +L      +  G+   IAW 
Sbjct: 2   FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61

Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             G      T+     +    +W   + T+  V+V  ++  +I +P+GIW      +S+ 
Sbjct: 62  LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   PA V+    V       +   +   +          +     G      
Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|299529137|ref|ZP_07042585.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni S44]
 gi|298722893|gb|EFI63802.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni S44]
          Length = 414

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   A  T   +L+++   ++       L A S R      P+LD MQ+ P   +L   
Sbjct: 183 GIWSEAMVTLALVLTSLFFCIVIGLPVGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPV 242

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F     G V G  +  +FA     +  +       +  +  DL E SR++  S  Q 
Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+ 
Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D++
Sbjct: 348 LATVGGLGIVLLAIVLDRI 366



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 85/279 (30%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +           +P+   +  +   L  I        + L + Q     L I     + 
Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVSLL 177

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VA+   W                       +T+  V+  +    +I +PVGI +     
Sbjct: 178 IVALLGIWS-------------------EAMVTLALVLTSLFFCIVIGLPVGILLASSDR 218

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
                +P    +   PA V+   VV          N+   ++ I      ++     G  
Sbjct: 219 AQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  E + ++  +  +    + LP   P  + G   A   + +  +++ + + G   
Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +     +       +G L +    + L+R 
Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366


>gi|239940068|ref|ZP_04692005.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces roseosporus NRRL 15998]
          Length = 867

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           +L  GI+ ++   ++    P  ++  V   L D   L   A  T   +L A +++L+   
Sbjct: 49  LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A++S+ +  V+ P+LD MQ++P + +L   V++F     G V G     IFA+  
Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +       + +P ++P ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362
           F  PL   V      L        +    + S     ++ +L      +  G+   IAW 
Sbjct: 2   FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61

Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             G      T+     +    +W   + T+  V+V  ++  +I +P+GIW      +S+ 
Sbjct: 62  LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   PA V+    V       +   +   +          +     G      
Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|221369069|ref|YP_002520165.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221162121|gb|ACM03092.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 296

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ ++  ++     +        +    +    L +    T   +    V +++    
Sbjct: 62  IVVLAVLLAIVWAGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLP 121

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA+S R+  ++ P+LD+MQ++P   +L   VV F     GKV G     I+A+   
Sbjct: 122 IGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIFG---IGKVPGMIAVVIYAVP-- 176

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  +  ++ E + +F  S  QK W + +P ++P L+  +  ++     
Sbjct: 177 ---PMIRLTNLGIRLVDAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGINQTIMMSLS 233

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + M+ VG       G+G  +  AI  Q           ++ +  ++D+
Sbjct: 234 MVVVASMVGVG-------GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 278



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 11/276 (3%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R +            + V+     +             +      +  + +    +    
Sbjct: 14  RTLRMMRKTIDGSFRDLVRSFSDAIDTATAPLQLALNAIERAFTSTPWIVVLAVLLAIVW 73

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A   +W+ +              +     +T+  V V  + A II +P+GI       + 
Sbjct: 74  AGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLPIGILAARSDRMQ 133

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P   ++   P+ V+   VV       +   + + +         ++     G    
Sbjct: 134 RLVNPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 189

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E A +F  +  +    + LP   P  +TG       + +  +V+ +   G     
Sbjct: 190 DAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGINQTIMMSLSMVVVASMVGVG----- 244

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  + ++     F    +    +    +  +R
Sbjct: 245 --GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 278


>gi|264677530|ref|YP_003277436.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni CNB-2]
 gi|262208042|gb|ACY32140.1| glycine betaine/L-proline transportsystem permease protein proW
           [Comamonas testosteroni CNB-2]
          Length = 414

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   A  T   +L+++   ++       L A S R      P+LD MQ+ P   +L   
Sbjct: 183 GIWSEAMVTLALVLTSLFFCIVIGLPVGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPV 242

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F     G V G  +  +FA     +  +       +  +  DL E SR++  S  Q 
Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+ 
Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D++
Sbjct: 348 LATVGGLGIVLLAIVLDRI 366



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 85/279 (30%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +           +P+   +  +   L  I        + L + Q     L I     + 
Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVSLL 177

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VA+   W                       +T+  V+  +    +I +PVGI +     
Sbjct: 178 IVALLGIWS-------------------EAMVTLALVLTSLFFCIVIGLPVGILLASSDR 218

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
                +P    +   PA V+   VV          N+   ++ I      ++     G  
Sbjct: 219 AQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  E + ++  +  +    + LP   P  + G   A   + +  +++ + + G   
Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +     +       +G L +    + L+R 
Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366


>gi|306835145|ref|ZP_07468185.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
 gi|304569002|gb|EFM44527.1| nitrate ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
          Length = 292

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++   IA +I IP+G W+G          PF Q+L       + PL +
Sbjct: 98  IFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGL 157

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       ++I    W  L N I         +K +A++      +   YI+
Sbjct: 158 ALLR----DAENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIV 213

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P  +TG   +   AW   + +E+   G       G+G ++     +     +V+ 
Sbjct: 214 GPTALPGIITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVV 267

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LAL+  +
Sbjct: 268 IVLIGVIGLALDYLV 282



 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 23/247 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDV--------HSLPQYASRTTLRM 72
            +AF+ +   +            P R     V I  D           +  +   +  R+
Sbjct: 50  FIAFIAIWQAVAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRV 109

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I+++           S        P + I++ +  L +L   +    +       
Sbjct: 110 LIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLRD------- 162

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            AE  A+F I  S +W    +  +++  I    + ++ +   +  Q+  Y+  P ++PG+
Sbjct: 163 -AENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPTALPGI 221

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  M  S+S  W  +VA+EM+V G       G+G ++       D+ AI+  ++ +  + 
Sbjct: 222 ITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIG 275

Query: 253 FLYDQLL 259
              D L+
Sbjct: 276 LALDYLV 282


>gi|297617500|ref|YP_003702659.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297145337|gb|ADI02094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 264

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 86/216 (39%), Gaps = 13/216 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            + Q+   +I    ++++RV+   ++A+++ IP+GI +       +  +PF   +   P 
Sbjct: 56  VSLQEEGVLIPYTLVSLYRVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPV 115

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL++          +     ++  GT + ++  V    S  P +    A +    G
Sbjct: 116 TALIPLMILYFGIG----DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKG 171

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +  ++LP   P  +       G AW   +V+E+ +        +GLG  I  S    
Sbjct: 172 RAVYTKVLLPASLPGIMDNLRICMGWAWTYLVVAELVA------ANSGLGFMILRSQRFL 225

Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
               + +G+L++    +  +   + L   L+ +  R
Sbjct: 226 QTDRIFVGLLVIGGLGVVTDFAFKALSKALFPWWER 261



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 98/247 (39%), Gaps = 18/247 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           P  + +L+ ++++G   +L    +        P  +        +   L  Y   +  R+
Sbjct: 16  PRTYMMLSVIVILGAWCVLSFSGRVNPIYLPSPAAVAKAFVSLQEEGVLIPYTLVSLYRV 75

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+  +++ +       + A SR+      P +D ++ +P+   +   ++YF         
Sbjct: 76  LAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLMILYFGIG------ 129

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +   +  IF    + +   +  ++  +P++L   + +    G   +  + +P S+PG+
Sbjct: 130 --DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLPGI 187

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           + N+ + M   W ++V +E++          G+G  I  + +      I   +L + G+ 
Sbjct: 188 MDNLRICMGWAWTYLVVAELVAANS------GLGFMILRSQRFLQTDRIFVGLLVIGGLG 241

Query: 253 FLYDQLL 259
            + D   
Sbjct: 242 VVTDFAF 248


>gi|163757527|ref|ZP_02164616.1| taurine ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162285029|gb|EDQ35311.1| taurine ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 422

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 4/145 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+   ++ SII IP+G  +G          P  + +   P     PL++     
Sbjct: 229 GYSLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLIIIWFGI 288

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     AG S         A S   + W+  R++ILP   
Sbjct: 289 G----EEGKVILLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQILRHVILPNSL 344

Query: 504 PYYVTGAITACGGAWNASIVSEVAS 528
           P   TGA  A G  W   + +E+ +
Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA 369



 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++   +  R+++  ++  +           S        PI++ M+ +P L  +   
Sbjct: 223 SLWEHLGYSLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLI 282

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GKVI         +F + +W MT +    +  +       + S   S WQ 
Sbjct: 283 IIWFGIGEEGKVI--------LLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQI 334

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             ++ +P S+P +     ++M   W  VVA+E++  
Sbjct: 335 LRHVILPNSLPEIFTGARVAMGVCWGTVVAAELVAA 370


>gi|110677434|ref|YP_680441.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109453550|gb|ABG29755.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 659

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 79/527 (14%), Positives = 168/527 (31%), Gaps = 48/527 (9%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   ++ +  ++ +   +    A KS      L+P L +MQ++P   +L   V+
Sbjct: 144 WEIAMETMSVLVISAPLAFMIGLLVGIYAWKSPSFNRALLPFLSVMQTLPFFTYLLPAVI 203

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F             AA  A     +  M       L  +  ++ E  +    + +Q   
Sbjct: 204 FFKVG--------PTAAAVATTVFAIPPMILMTTLGLQKVSSEVVEAGKMSGCTRFQMMR 255

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P +   ++  +          ++    +VV    I +PG+G+ +   +    +   
Sbjct: 256 HVYLPSARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLQMLGSFKIGRA 308

Query: 242 LYAMLTMLGVIFLYDQLL--------------------FRPMIVWSNKFRLERTTGIYPA 281
               +T++ V    D+L                      + ++  +  F L         
Sbjct: 309 FEIGVTIVLVAITLDRLSKAWVAKLPEHFDRGTPFYIRHKYLVAGAVGFALFFALAQLVP 368

Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSP-LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340
               +   +  +  R I      + +           R +  +    P     L      
Sbjct: 369 ILAEVGRRQSLSQGREIDQLIKAYLALDWVKASTDAMRYVLNVWILNPFRDFLLSIPTSA 428

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
             +L +    V+ G    +       +V    + D         IT++ V+  + +A II
Sbjct: 429 FIILVVAAGLVIAGPRQAVLAAVFFSLVALSGWWD------RSVITLYSVIAAVSLALII 482

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IPVGI    R   + ++         FP+ ++    +        +  + + +  +   
Sbjct: 483 GIPVGILAARRETTARRMLLVCDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFAMVPL 542

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             Y     I G  + P +  E A     T  +    + LP   P    G   A   A+  
Sbjct: 543 VRY----TIEGLRSVPAEMMEAADMSGATKLQKLWQVQLPLALPTMAVGFNQAIMFAFFM 598

Query: 521 SIVSEVASWGH--IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            I++           L+ T  GAY+ ++   G    ++     M   
Sbjct: 599 VIIAAFIGTQDLGQELQRTLAGAYLGKNLVLGLCVSLMALTFDMIVM 645



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 93/238 (39%), Gaps = 19/238 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF++++    +++ G ++  +      +V ++         +  T   +++A+ ++L+  
Sbjct: 428 AFIILVVAAGLVIAGPRQAVLAAVFFSLVALS----GWWDRSVITLYSVIAAVSLALIIG 483

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LAA+       ++ + D  Q+ P   +L   ++ F             + + +I 
Sbjct: 484 IPVGILAARRETTARRMLLVCDTAQTFPSFIYLIPAIMLFGI--------TATSVVMSIL 535

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +     + L ++P ++ E +     +  QK W + +P ++P +      ++   
Sbjct: 536 IFAMVPLVRYTIEGLRSVPAEMMEAADMSGATKLQKLWQVQLPLALPTMAVGFNQAIMFA 595

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +F V+ +  I   D       +G  +   +    L   L   L +  +   +D ++ +
Sbjct: 596 FFMVIIAAFIGTQD-------LGQELQRTLAGAYLGKNLVLGLCVSLMALTFDMIVMK 646


>gi|118500401|gb|ABK97399.1| MsmF [uncultured bacterium Sargasso-2222818]
          Length = 285

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+++   IA+ I +P+G+++G+         P  + L   P   + PL +   S      
Sbjct: 91  RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMFS----GL 146

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  L    + +    N + G ++    +   A     +    + ++++PG  P+  T
Sbjct: 147 ETPVIFLATLASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHVVVPGALPFIFT 206

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G AW + + +E+ S         GLG  I +S    ++  +V+ +L +  F   
Sbjct: 207 GLEISVGVAWFSLVAAEMVSGE------FGLGYMINDSYMNITYVSMVIAMLTLGFFGWI 260

Query: 569 LNRFL 573
            + F+
Sbjct: 261 TSAFV 265



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+L A  I+             S++      PIL+ ++ IPIL ++   ++ F
Sbjct: 84  HIYYSCRRILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMF 143

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    G E   IF    + ++  T +    + +I       ++    S    F ++
Sbjct: 144 S--------GLETPVIFLATLASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHV 195

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP ++P +   + +S+   WF +VA+EM+          G+G  I  +      ++++ 
Sbjct: 196 VVPGALPFIFTGLEISVGVAWFSLVAAEMVSG------EFGLGYMINDSYMNITYVSMVI 249

Query: 244 AMLTMLG---VIFLYDQLLFRPMIVWSNK 269
           AMLT+     +   + + +   M+ W  K
Sbjct: 250 AMLTLGFFGWITSAFVRWVGNRMMQWRVK 278


>gi|119947028|ref|YP_944708.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865632|gb|ABM05109.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 686

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 85/556 (15%), Positives = 181/556 (32%), Gaps = 75/556 (13%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +L A+ +S+        LA K++    +L P+L++ QS+P   +L   VV+F 
Sbjct: 169 AMQTLSFVLVAVPVSVFLGLTSGILAFKNKSFESILTPLLNVAQSMPHFSYLIPVVVFFG 228

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  IG    AI  I  +    M       L  +  ++ E       +  Q  + + 
Sbjct: 229 -------IGDHAGAISTIIFAT-PPMIRLTILGLKKVSPEVLEAGMMSGCNARQLMFRVL 280

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +          ++    + V  + I   G+G  + +++   ++   L  
Sbjct: 281 IPTARHDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGYDLLVSLNMLNIGQALEL 333

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK-------------------------------FRLE 273
            ++++ +  + D+L     + W+NK                               + + 
Sbjct: 334 GVSIVLIAVVLDKLS----LAWANKQSDYFAELPFHLRHKHSLAFLGILIVTSAIAYAVT 389

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
                     + +   +     +F  +      +   + V +      +     P     
Sbjct: 390 VVFPDKANYLYFINDSQGLTTEKFWDFIVDWIITNTYDAV-QSFNFFMITSILMPMKEAY 448

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L      +  L      +V G+   I   ++   +    + D         IT +     
Sbjct: 449 LSMPVAATLFLVAGTGYIVGGIRSAIIVTALIAFIALTPWWD------QALITAYMTTFA 502

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +II+  I   VGI     P  +  I         FP+ V+   V+       L+  + + 
Sbjct: 503 VIISVTIGCSVGILCSRTPRATKVILLVCDTFQTFPSFVYLIPVIMLFGVSDLSVLIAVI 562

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +        Y     + G S  P   +E  S   +   +    I LP  FP+ + G    
Sbjct: 563 VYATIPATRY----TVEGLSNVPKSLQEAGSMSGVNRMQRLLKIELPLAFPHIMLGINQT 618

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF--PEVVLGVLIMCCFVLALNR 571
              A    I+               LG  I +S  + +     +VLG+ +     LA++ 
Sbjct: 619 VIFALFMVIIGAFIGTDD-------LGQLIMQSLSQANAMGQGIVLGLCV-AFIGLAVDH 670

Query: 572 FLWHPLYLYGTRCLRL 587
            +    + +  +  ++
Sbjct: 671 LI----HTWAEQRKKV 682



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%)

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
           L +  ++  ++              N +++L   LG ++        +  S    + +  
Sbjct: 70  LDITEESTMIQEFTRGLSGVILFSINLIRELL--LGGVKTVVAFTSWEFISANEWARIPA 127

Query: 346 IFWFCVVCGVAI---GIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           + W  V  G  +    +  +S+  +    T    ++  W   + T+  V+V + ++  + 
Sbjct: 128 LPWPAVAAGAFLIGHYLGGRSLSILAGTSTLYIAVFGQWTPAMQTLSFVLVAVPVSVFLG 187

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +  GI         S + P   +  + P   +   VV           +   +       
Sbjct: 188 LTSGILAFKNKSFESILTPLLNVAQSMPHFSYLIPVVVFFGIGDHAGAISTIIF----AT 243

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++   I G      +  E          +    +++P      + G           +
Sbjct: 244 PPMIRLTILGLKKVSPEVLEAGMMSGCNARQLMFRVLIPTARHDILIGVNQVIMQCLAMA 303

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++             GLG  +  S    +  + +   + +    + L++ 
Sbjct: 304 VIASFIG-------AKGLGYDLLVSLNMLNIGQALELGVSIVLIAVVLDKL 347


>gi|120610182|ref|YP_969860.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120588646|gb|ABM32086.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 451

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  V V+G++     G          + +V +      + Q A  T   +L+++   L+
Sbjct: 170 TLGMVAVVGLLAWQFAGRALALGAVVSLLLVAM----LGIWQEAMVTLSLVLTSLAFCLV 225

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L A S R   +L P LD MQ+ P   +L   V+ F     G V G  +  +FA
Sbjct: 226 LGLPLGILLASSDRAQRLLRPALDAMQTTPAFVYLVPVVMLFG---IGNVPGVVVTIVFA 282

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +       L  +  DL E +R++  S  Q  W + +P +MP ++  +  ++ 
Sbjct: 283 -----LPPLVRLTNLGLRQVRPDLVEAARAYGASPLQMLWKVQLPLAMPSIMAGINQALM 337

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI VG       G+G  +   I   D+       L ++ +    D+L
Sbjct: 338 LSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAITLDRL 387



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 87/269 (32%), Gaps = 12/269 (4%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                L+  V+        +R         + S       L +     +          +
Sbjct: 131 WINQGLTWTVEHFRPAFQAVRAPVDATLAGVQSVLTGLPTLGMVAVVGLLAWQFAGRALA 190

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +G +V+      +L +     +T+  V+  +    ++ +P+GI +         ++P   
Sbjct: 191 LGAVVSLLLVA-MLGIWQEAMVTLSLVLTSLAFCLVLGLPLGILLASSDRAQRLLRPALD 249

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   PA V+   VV          N+   ++ I      ++     G      D  E A
Sbjct: 250 AMQTTPAFVYLVPVVMLFGIG----NVPGVVVTIVFALPPLVRLTNLGLRQVRPDLVEAA 305

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    + LP   P  + G   A   + +  +++ + + G       GLG  +
Sbjct: 306 RAYGASPLQMLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMV 358

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +       +G L +    + L+R 
Sbjct: 359 LRGIGRLDMGLATVGGLGIVLLAITLDRL 387


>gi|116051468|ref|YP_789699.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388035|ref|ZP_06877510.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313108805|ref|ZP_07794791.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|115586689|gb|ABJ12704.1| putative aliphatic sulfonates ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310881293|gb|EFQ39887.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 274

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 23/284 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55
           + L   +     R   P  +   A  L+       ++ +      +   P  I+  + + 
Sbjct: 6   LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   +  R+ +   I         T    SRR    L P    +++IP L +
Sbjct: 65  LARGELWGHVGASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F      K++   L A F ++         ++   +  + R   E+ R +RLS
Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P ++P L   +  ++S  W F+VA+E+I          G+G  ++   + 
Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276
                ++ A+L +  +  L D L   L R  + W + F  E   
Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274



 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368
              +++ R    +R         L      S+  ++ + W       A      ++  + 
Sbjct: 7   RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +  V         ++ RV     I S + + VG W+G      + ++P  Q L A 
Sbjct: 67  RGELWGHVG-------ASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAI 119

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL++               +L+  G  + +   ++AG       + E+   + +
Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + +   R I+LP   P   TG   A   +W   + +E+ +       T GLG  +++  E
Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 V+  +L++       +  L
Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254


>gi|77465073|ref|YP_354576.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126464525|ref|YP_001045638.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332560670|ref|ZP_08414988.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|77389491|gb|ABA80675.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126106336|gb|ABN78866.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332274468|gb|EGJ19784.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 303

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ ++  ++     +        +    +    L +    T   +    V +++    
Sbjct: 69  IVVLAVLLAIVWAGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLP 128

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA+S R+  ++ P+LD+MQ++P   +L   VV F     GKV G     I+A+   
Sbjct: 129 IGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIFG---IGKVPGMIAVVIYAVP-- 183

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  +  ++ E + +F  S  QK W + +P ++P L+  +  ++     
Sbjct: 184 ---PMIRLTNLGIRLVDAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGVNQTIMMSLS 240

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + M+ VG       G+G  +  AI  Q           ++ +  ++D+
Sbjct: 241 MVVVASMVGVG-------GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 285



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 11/276 (3%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R +            + V+     +             +      +  + +    +    
Sbjct: 21  RTLRMMRKTIDGSFRDLVRSFSDAIDTATAPLQLALNAIERAFTSTPWIVVLAVLLAIVW 80

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A   +W+ +              +     +T+  V V  + A II +P+GI       + 
Sbjct: 81  AGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLPIGILAARSDRMQ 140

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P   ++   P+ V+   VV       +   + + +         ++     G    
Sbjct: 141 RLVNPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 196

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E A +F  +  +    + LP   P  +TG       + +  +V+ +   G     
Sbjct: 197 DAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGVNQTIMMSLSMVVVASMVGVG----- 251

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  + ++     F    +    +    +  +R
Sbjct: 252 --GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 285


>gi|294651139|ref|ZP_06728474.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292822971|gb|EFF81839.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 293

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +++        +L Q+ + +  R+L A+V ++            ++ +  VL P++++++
Sbjct: 82  LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            IP L +L   V++F           E   +  IF S +  +  S    + +   + E  
Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + S   S  Q FW++ +P ++P ++  + + +  GW  +VASE++          GIG  
Sbjct: 194 ALSLGASQSQVFWHVILPTALPHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  A +      ++  ++ +  V   ++  L
Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278


>gi|289623910|ref|ZP_06456864.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651131|ref|ZP_06482474.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330868938|gb|EGH03647.1| taurine ABC transporter permease [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 291

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%)

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           RLE        DS  L    K    +    +   + S  + ++  L   L +        
Sbjct: 3   RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLAALLTLWWAVTAGG 62

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +++       + +L   W     G      WQ +G                    ++ R+
Sbjct: 63  WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +  IP+GI IG          P  +     P   + PL+V        +   
Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       I      G           A S   T W+  R+++LP   P  +TG 
Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFVVQSAAQFLVTDVVVLGILVIAVIAFAME 273

Query: 571 ---RFLWHPLYLY 580
              R L   L  +
Sbjct: 274 LGLRALQRRLVPW 286



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  ++L           +R    +  P+++  + IP L +L  
Sbjct: 90  ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFVVQSAAQFLVT 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287


>gi|320326464|gb|EFW82516.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331757|gb|EFW87695.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330872583|gb|EGH06732.1| taurine ABC transporter permease [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 291

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%)

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           RLE        DS  L    K    +    +   + S  + ++  L   L +        
Sbjct: 3   RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +++       + +L   W     G      WQ +G                    ++ R+
Sbjct: 63  WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +  IP+GI IG          P  +     P   + PL+V        +   
Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       I      G           A S   T W+  R+++LP   P  +TG 
Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273

Query: 571 ---RFLWHPLYLY 580
              R L   L  +
Sbjct: 274 LGLRALQRRLVPW 286



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  ++L           +R    +  P+++  + IP L +L  
Sbjct: 90  ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287


>gi|20088963|ref|NP_615038.1| sulfonate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
 gi|19913811|gb|AAM03518.1| sulfonate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
          Length = 262

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++    + I  A I+ IP+GI +G+   ++  + P  ++L   P   + P  +     
Sbjct: 64  LTSLLHFSIGIAAAFILGIPLGIAMGWFKAVNRAVDPIIEILRPIPPLAWIPFAIVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGI 502
            H         ++  G  + I+ N   G    P  + E A     T      R++ +P  
Sbjct: 124 TH----QAAGFVVFVGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRFVAIPSA 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G   A G  W   + +E+       +   GLG  I  +        V++ +L++
Sbjct: 180 MPSIAAGIRIAMGVGWMCLVAAEMFG-----VSNRGLGYQIWHNYYLHRMDFVLVYMLLL 234

Query: 563 CCFVLALNRFL 573
               L ++RF 
Sbjct: 235 GFIGLLIDRFF 245



 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 79/196 (40%), Gaps = 14/196 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + L     +  + +            + +   + PI++I++ IP L ++ F +V+F 
Sbjct: 63  TLTSLLHFSIGIAAAFILGIPLGIAMGWFKAVNRAVDPIIEILRPIPPLAWIPFAIVWFG 122

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYL 183
                       AA F +F   ++ +  + Y    N+PR   E ++    +       ++
Sbjct: 123 L--------THQAAGFVVFVGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRFV 174

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +   + ++M  GW  +VA+EM  V +      G+G  I        +  +L 
Sbjct: 175 AIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSNR-----GLGYQIWHNYYLHRMDFVLV 229

Query: 244 AMLTMLGVIFLYDQLL 259
            ML +  +  L D+  
Sbjct: 230 YMLLLGFIGLLIDRFF 245


>gi|297161909|gb|ADI11621.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces bingchenggensis BCW-1]
          Length = 874

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++   VP  +       +D       A  T   +L A  I+++    
Sbjct: 49  LLLAGILAVLAWWLRGL-VPAVLAFAGFALIDSIEQWDEAMETLSLVLVAGAITIVLAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A+++R +  +L P+LD MQ++P   +L   + +F     G V G     +FA+   
Sbjct: 108 LGIWASRNRAVSALLRPVLDFMQTMPAFVYLIPGIFFFGV---GVVPGVIATIVFAMPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +  +    + +P ++P ++  +  ++     
Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTTPRRTLLRVQLPLALPTIMAGVNQAIMLALS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G     +         AI   D+       + ++ +    D++
Sbjct: 220 MVVIAGMVGGGGLGSSVF-------EAISSVDVALGFEGGIAVVILAMYLDRM 265



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 9/180 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIASIIWIPV 404
            ++ G+   +AW   G +     +     +  +        T+  V+V   I  ++ +P+
Sbjct: 49  LLLAGILAVLAWWLRGLVPAVLAFAGFALIDSIEQWDEAMETLSLVLVAGAITIVLAVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S+ ++P    +   PA V+    +       +   +   +          
Sbjct: 109 GIWASRNRAVSALLRPVLDFMQTMPAFVYLIPGIFFFGVGVVPGVIATIVF----AMPPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  R    + LP   P  + G   A   A +  +++
Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTTPRRTLLRVQLPLALPTIMAGVNQAIMLALSMVVIA 224


>gi|25027925|ref|NP_737979.1| putative nitrate transport permease protein [Corynebacterium
           efficiens YS-314]
 gi|23493208|dbj|BAC18179.1| putative nitrate transport permease protein [Corynebacterium
           efficiens YS-314]
          Length = 261

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + + W    ++ RV+   +IA++I IP+G  +G    +   + P  Q+L       +
Sbjct: 62  PGSVGIFWHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAW 121

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ ++ +    L+       +++    W IL N I         + ++  +     W  
Sbjct: 122 LPIGLALL----LDAERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLA 177

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  +T    +   +W   IV+E+   G       G+G ++     +    
Sbjct: 178 ISRVWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDID 231

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +V+ ++++    L L+  +
Sbjct: 232 AIVVAIVLIGLTGLILDHLI 251



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+L   +I+ +       L  + + L   L P++ I++ +  L +L   +  
Sbjct: 69  WHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLAL 128

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            ++        AE  A+F I  S +W +  +   ++ +I     +++ +     W     
Sbjct: 129 LLD--------AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISR 180

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PG++  + +S+S  W  ++ +EM+V G       GIG ++       D+ AI+
Sbjct: 181 VWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIV 234

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +     + D L+
Sbjct: 235 VAIVLIGLTGLILDHLI 251


>gi|297570467|ref|YP_003691811.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurivibrio alkaliphilus AHT2]
 gi|296926382|gb|ADH87192.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurivibrio alkaliphilus AHT2]
          Length = 263

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 24/253 (9%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------- 385
             ++R     + FW  ++  +   + W+    +  +       + + LG +         
Sbjct: 6   PHSRRPDLAGERFWSPLLAVLVFLLLWEVAARLYANPYLLPGPWQVGLGLVEVWRSGKLF 65

Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                +++R     ++A ++ +P+G+ +G+   +   + P  QLL       +FPL V  
Sbjct: 66  EHIAVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPLAVLW 125

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L     + +   F     IL + IA      + + +VA +F  + W     +++P
Sbjct: 126 FKIGDLPAIFIIFIASFF----PILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKVVIP 181

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             FPY + G   A G  W   +  E+          +GLG +I ++        V++G+L
Sbjct: 182 AAFPYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIVGML 235

Query: 561 IMCCFVLALNRFL 573
           ++    L L+R +
Sbjct: 236 LVGALGLLLDRLM 248



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 105/256 (41%), Gaps = 14/256 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           ++  P     R +  +  +L F+L+  +   L         P  +   +        L +
Sbjct: 7   HSRRPDLAGERFWSPLLAVLVFLLLWEVAARLYANPYLLPGPWQVGLGLVEVWRSGKLFE 66

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + +  R  +A +++++       +     RL   L P++ +++ I  + +    V++F
Sbjct: 67  HIAVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPLAVLWF 126

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      +L AIF IF +  + +  S   ++ N+     +V+ +F  S W     +
Sbjct: 127 KIG--------DLPAIFIIFIASFFPILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKV 178

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P ++  + +++  GW  +VA EM+          G+G +I  A        ++ 
Sbjct: 179 VIPAAFPYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIV 232

Query: 244 AMLTMLGVIFLYDQLL 259
            ML +  +  L D+L+
Sbjct: 233 GMLLVGALGLLLDRLM 248


>gi|270265364|ref|ZP_06193625.1| transporter [Serratia odorifera 4Rx13]
 gi|270040768|gb|EFA13871.1| transporter [Serratia odorifera 4Rx13]
          Length = 375

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q ++       +V  I +        A  T   +L+A+   +
Sbjct: 120 LLGMPAPIAILVFSLIAWQISSFSMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFCI 179

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 180 VIGLPLGIWLARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 236

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 237 A-----LPPIVRLTILGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTL 291

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 292 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 342



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      +   V   IAWQ   + +   T   ++ +  +G      +T+  V+  +   
Sbjct: 119 LLLGMPAPIAILVFSLIAWQISSFSMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFC 178

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+    H +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 179 IVIGLPLGIWLARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 234

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 235 IFALPPIVRLTILGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLA 294

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 295 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 342


>gi|146312799|ref|YP_001177873.1| glycine betaine transporter membrane protein [Enterobacter sp. 638]
 gi|145319675|gb|ABP61822.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 355

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q  +    I  ++  + +        A  T   +L+A+   +
Sbjct: 102 LLGMPAPVAIMLFALIAWQFGSAGMGIATLISLVAIGAIGAWSQAMVTLALVLTALFFCI 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 IIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+  V+  +    II +P+GIW+   P  +  I+P    +   PA V+   +V   
Sbjct: 145 QAMVTLALVLTALFFCIIIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF 204

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  N+   ++ I      I+   I G +  P D  E + SF  +  +    + LP 
Sbjct: 205 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 260

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G       A +  +++ + + G       GLG  +     +       +G + 
Sbjct: 261 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVG 313

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 314 IVILAIILDRL 324


>gi|332638601|ref|ZP_08417464.1| ABC-type proline/glycine betaine transport system, permease
           component [Weissella cibaria KACC 11862]
          Length = 572

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 15/176 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   AK   +  ++ P+LD MQ++P   +L   V +F     G V G   + IFA 
Sbjct: 111 GVPLGIWMAKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA- 166

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  +P+DL E + S+  +  QK + L +P +   ++  +  ++  
Sbjct: 167 ----LPPTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIML 222

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++  D+       L ++ +  + D+ 
Sbjct: 223 ALSMVVIASMI-------GAPGLGRGVLSAVQNADIGKGFVNGLALVILAIIIDRF 271



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF-----RVVVLIIIASIIWI 402
           W  ++      I      +    FT+  +L++      +        VVV  +++ +I +
Sbjct: 53  WAVIIGVTIFAILSSGKKWGFAAFTFLGLLFIANQNLWSDLMNTLTLVVVSSLVSIVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+  +  ++  +QP    +   P  V+    V+      +       +        
Sbjct: 113 PLGIWMAKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P D  E A S+  T  +    + LP      + G       A +  +
Sbjct: 169 PTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  + +     +  +  L +    + ++RF
Sbjct: 229 IASMIG-------APGLGRGVLSAVQNADIGKGFVNGLALVILAIIIDRF 271


>gi|330891653|gb|EGH24314.1| taurine ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 291

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%)

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           RLE        DS  L    K    +    +   + S  + ++  L   L +        
Sbjct: 3   RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +++       + +L   W     G      WQ +G                    ++ R+
Sbjct: 63  WIKPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +  IP+GI IG          P  +     P   + PL+V        +   
Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       I      G           A S   T W+  R+++LP   P  +TG 
Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 220 RIGLGVGWSTLVGAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273

Query: 571 ---RFLWHPLYLY 580
              R L   L  +
Sbjct: 274 LGLRALQRRLVPW 286



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  ++L           +R    +  P+++  + IP L +L  
Sbjct: 90  ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +V +E+I          G+G  +  A +    
Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVGAELIA------ATSGLGFMVQSAAQFLVT 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287


>gi|125717254|ref|YP_001034387.1| glycine/betaine ABC transporter permease [Streptococcus sanguinis
           SK36]
 gi|125497171|gb|ABN43837.1| ABC transporter, glycine-betaine/proline permease protein, putative
           [Streptococcus sanguinis SK36]
          Length = 574

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   ++ +  IS++         AKS R+  V+ P+LD MQ++P   +L  
Sbjct: 87  QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +        ++  I  +L E S SF  +G Q
Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQISTELIEASDSFGGTGKQ 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  A++  D+
Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251

Query: 239 LAILYAMLTMLGVIFLYDQL 258
            +     ++++ +  + D+L
Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + + I+P    +   PA V+    V+      +       +        
Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +            +  E + SF  TG +    + LP      + G       A +  +
Sbjct: 169 PTVRFTNLAIRQISTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + +           GLG  +  + +        +  + +    + ++R 
Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271


>gi|323976150|gb|EGB71243.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 275

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRTQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIASIAFLLELGLRALQRRLTPW 270



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRTQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIASIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|29347160|ref|NP_810663.1| glycine betaine/L-proline transport system permease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253571897|ref|ZP_04849302.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 1_1_6]
 gi|298387517|ref|ZP_06997069.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 1_1_14]
 gi|29339059|gb|AAO76857.1| glycine betaine/L-proline transport system permease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251838494|gb|EES66580.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 1_1_6]
 gi|298259724|gb|EFI02596.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 1_1_14]
          Length = 276

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I  +      ++     +  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYITIAVLAALAWFKSGKGTAVFTLLGLLLIYGMGFWEETMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A S R   ++ P+LD MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 LLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTILTGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V+    +
Sbjct: 39  HVLFGIPFYITIAVLAALAWFKSGKGTAVFTLLGLLLIYGMGFWEETMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ +P+GIW       +  ++P    +   PA V+    V       +       +  
Sbjct: 99  ALLLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTILTGINQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263


>gi|148545502|ref|YP_001265604.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148509560|gb|ABQ76420.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 279

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V     
Sbjct: 85  GASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      LL+       I      G           A S   +  +  R++ILP   
Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254

Query: 564 CFVLALN---RFLWHPLYLY 580
               AL    R L   L  +
Sbjct: 255 LIAFALEMSLRALQRKLVPW 274



 Score =  115 bits (288), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   +  R+  A+V + L           +R    +L P+++  + IP L +L  
Sbjct: 78  ASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   S  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 275


>gi|294679156|ref|YP_003579766.1| glycine betaine/L-proline ABC transporter permease ProW-2
           [Rhodobacter capsulatus SB 1003]
 gi|294477972|gb|ADE87359.1| glycine betaine/L-proline ABC transporter, permease protein ProW-2
           [Rhodobacter capsulatus SB 1003]
          Length = 303

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q    T   +    +++++        AA+S RL  ++ P+LD+MQ++P   +L 
Sbjct: 101 WVGLWQDTMVTLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSPVLDVMQTLPSFVYLI 160

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             VV F     GKV G     I+A+       M       +  + R++ E + +F  S  
Sbjct: 161 PVVVIFG---IGKVPGMIAVVIYAVP-----PMIRLTTLGIRLVDREVTEAAEAFGSSAR 212

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           QK W + +P ++P ++  +  ++      VV + M+ VG       G+G  +  AI  Q 
Sbjct: 213 QKLWNVQLPLALPTIMTGVNQTIMMSLSMVVVASMVGVG-------GLGKNVLQAINNQF 265

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
                     ++ +  ++D+
Sbjct: 266 FTVGFLNGFALVAIAIVFDR 285



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 70/211 (33%), Gaps = 11/211 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ +            + +     +T+  V    ++A +I +P+GI       +   + P
Sbjct: 86  WKIVLGTAVALCLIGWVGLWQDTMVTLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSP 145

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              ++   P+ V+   VV       +   + + +         ++     G      +  
Sbjct: 146 VLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTTLGIRLVDREVT 201

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A +F  +  +    + LP   P  +TG       + +  +V+ +   G       GLG
Sbjct: 202 EAAEAFGSSARQKLWNVQLPLALPTIMTGVNQTIMMSLSMVVVASMVGVG-------GLG 254

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             + ++     F    L    +    +  +R
Sbjct: 255 KNVLQAINNQFFTVGFLNGFALVAIAIVFDR 285


>gi|301058810|ref|ZP_07199796.1| ABC transporter, permease protein [delta proteobacterium NaphS2]
 gi|300447095|gb|EFK10874.1| ABC transporter, permease protein [delta proteobacterium NaphS2]
          Length = 278

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 93/255 (36%), Gaps = 26/255 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD-----VLYVIWLGCITMFRVVVLI 394
           V  +L + W      +   +    +  +V    +       +  +     +++ RV++  
Sbjct: 14  VPVLLILIWIYAAWNIGNQVILPKVDSVVALLLHPTENLISMGSLSSNVAVSLVRVIMGY 73

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------- 446
           ++A+ + IP+GI +G+       +  F  L    P   + PLV++      +        
Sbjct: 74  LLAAALGIPLGILMGYYGLAFRLMNTFLNLFRPIPPLAWVPLVMAWFGIASMATALGLET 133

Query: 447 --------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   N    +  ++  G  + IL + I G         + A     + ++ +R ++
Sbjct: 134 GRLYVYLNNLKFSMIFIIFIGGFYPILSSSIHGVMNVNRTLVDSARVLGASEYQVFRKVL 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G     G +W   + +E+          +G+G  I  +    S   V+ G
Sbjct: 194 IPAAMPSIINGLRIGLGISWMCLVSAEMLPG-----SISGVGYLITHAYTLASTDIVIAG 248

Query: 559 VLIMCCFVLALNRFL 573
           ++ +     A++R  
Sbjct: 249 MVSIGLVGAAMDRVF 263



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 88/224 (39%), Gaps = 17/224 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           ++      + + SL    + + +R++   +++         L         ++   L++ 
Sbjct: 45  LLHPTENLISMGSLSSNVAVSLVRVIMGYLLAAALGIPLGILMGYYGLAFRLMNTFLNLF 104

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAE------------LAAIFAIFTSQVWNMTFSMY 155
           + IP L ++   + +F        +G E             + IF IF    + +  S  
Sbjct: 105 RPIPPLAWVPLVMAWFGIASMATALGLETGRLYVYLNNLKFSMIFIIFIGGFYPILSSSI 164

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + N+ R L + +R    S +Q F  + +P +MP ++  + + +   W  +V++EM+  
Sbjct: 165 HGVMNVNRTLVDSARVLGASEYQVFRKVLIPAAMPSIINGLRIGLGISWMCLVSAEMLPG 224

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 + G+G  I  A        ++  M+++  V    D++ 
Sbjct: 225 -----SISGVGYLITHAYTLASTDIVIAGMVSIGLVGAAMDRVF 263


>gi|206560415|ref|YP_002231179.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036456|emb|CAR52352.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 291

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 88/234 (37%), Gaps = 10/234 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +   + W   +  V                ++     +      ++ RV+   + A+   
Sbjct: 52  WQAAVHWRLSLGIVTFANVPAPADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I +G+ IG    +   + P  ++L   PA  + PL +       L+    +  +   G  
Sbjct: 112 IGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N + GA A        A S    G   +  +ILPG  P   TG     G AW   
Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCL 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +E+ +  +      G+G +  ES    ++P++V+G+ ++    +  +  +  
Sbjct: 228 VTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+  V +            
Sbjct: 60  LSLGIVTFANVPAPADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAGIGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|259506319|ref|ZP_05749221.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
 gi|259166099|gb|EEW50653.1| nitrate ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
          Length = 257

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              + + W    ++ RV+   +IA++I IP+G  +G    +   + P  Q+L       +
Sbjct: 58  PGSVGIFWHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAW 117

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ ++ +    L+       +++    W IL N I         + ++  +     W  
Sbjct: 118 LPIGLALL----LDAERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLA 173

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  +T    +   +W   IV+E+   G       G+G ++     +    
Sbjct: 174 ISRVWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDID 227

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +V+ ++++    L L+  +
Sbjct: 228 AIVVAIVLIGLTGLILDHLI 247



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+L   +I+ +       L  + + L   L P++ I++ +  L +L   +  
Sbjct: 65  WHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLAL 124

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            ++        AE  A+F I  S +W +  +   ++ +I     +++ +     W     
Sbjct: 125 LLD--------AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISR 176

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PG++  + +S+S  W  ++ +EM+V G       GIG ++       D+ AI+
Sbjct: 177 VWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIV 230

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +     + D L+
Sbjct: 231 VAIVLIGLTGLILDHLI 247


>gi|292489868|ref|YP_003532758.1| Taurine transport permease tauC [Erwinia amylovora CFBP1430]
 gi|292900910|ref|YP_003540279.1| taurine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200758|emb|CBJ47891.1| taurine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291555305|emb|CBA23627.1| Taurine transport permease protein tauC [Erwinia amylovora
           CFBP1430]
 gi|312174051|emb|CBX82304.1| Taurine transport permease protein tauC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 275

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 100/272 (36%), Gaps = 21/272 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-------AWQSIGYIVNHF 371
                   +P +     S   +  +L ++W      +   +        W  +  I +  
Sbjct: 10  ARRKWPPRWPLSRQLTLSLATLLILLAVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPI 69

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + D   +      ++ R+V+ ++ A +I +P+GI +G    +   + P  +L    P  
Sbjct: 70  GFMD-ATLWQHLAASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPPL 128

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL+V        +      LL+       +  + +AG  +        A S   + W
Sbjct: 129 AYLPLMVIWFGIGETSK----ILLIYLAIFAPVTMSALAGVKSARQVRLRAARSLGASRW 184

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +   +++LPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +
Sbjct: 185 QVLWFVVLPGALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLA 238

Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
              V+ G+  +     AL    R L   L  +
Sbjct: 239 TDVVLAGIATIALIAFALELGLRALQRRLTPW 270



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 105/249 (42%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I  L     +    + +    PI     +L Q+ + +  RM+ A++ +++
Sbjct: 37  VWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPIGFMDATLWQHLAASLTRMVIALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   +  L  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGVPIGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T S    + +  +     +RS   S WQ  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVTMSALAGVKSARQVRLRAARSLGASRWQVLWFVVLPGALPEILTGIRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  + T+  + F  +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIATIALIAFALELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|188535297|ref|YP_001909094.1| taurine transporter subunit [Erwinia tasmaniensis Et1/99]
 gi|188030339|emb|CAO98228.1| Taurine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 275

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 14/224 (6%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  +  I +   + D   +      ++ R+V+ ++ A +I +PVGI +G    +   + 
Sbjct: 58  VWHQLLTIASPTGFMD-ATLWQHLAASLTRIVIALLAAVVIGVPVGILMGLNATLRGILD 116

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  +L    P   + PL+V        +      LL+       +  + +AG  +     
Sbjct: 117 PLIELYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVR 172

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A S   + W+   +++LPG  P  +TG     G  W+  + +E+ +       T GL
Sbjct: 173 LRAARSLGASRWQVLWFVVLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGL 226

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           G  +  + E  +   V+ G+ ++     AL    R L   L  +
Sbjct: 227 GFMVQSAGEFLATDVVLAGITVIALIAFALELALRALQRRLTPW 270



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 100/242 (41%), Gaps = 17/242 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + +I  L     +    + +    P      +L Q+ + +  R++ A++ +++       
Sbjct: 44  LQLIAPLFLPAPQQVWHQLLTIASPTGFMDATLWQHLAASLTRIVIALLAAVVIGVPVGI 103

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   +  L  +L P++++ + +P L +L   V++F           E + I  I+ +   
Sbjct: 104 LMGLNATLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLAIFA 155

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S    + +  +     +RS   S WQ  W++ +P ++P ++  + + +  GW  +V
Sbjct: 156 PVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGALPEILTGVRIGLGVGWSTLV 215

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIV 265
           A+E+I          G+G  +  A +      +L  +  +  + F  +   + L R +  
Sbjct: 216 AAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIALIAFALELALRALQRRLTP 269

Query: 266 WS 267
           W 
Sbjct: 270 WH 271


>gi|325290616|ref|YP_004266797.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966017|gb|ADY56796.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 259

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 101/244 (41%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++I P I  +    +V  I  ++ +       P  ++      +      ++   + LR+
Sbjct: 16  QKIIPFILAIAFIFIVWQIGAMISNNATLLPGPTVVMKTFLEFIVSGEAIEHTVASLLRI 75

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A V+S         +  +   L  +L P++++++ I  L ++   V++F     GK  
Sbjct: 76  VLAWVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAVLWFGIGLSGK-- 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +F I  + ++ +  +    +  +   L +  +SF  S  +    + +P +MP +
Sbjct: 134 ------VFVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRICLPAAMPTI 187

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + +S    W  ++A+EM+          G+G  I   ++      ++  M+ +  V 
Sbjct: 188 VTGLRISFGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMGMVIIGVVG 241

Query: 253 FLYD 256
           FL+D
Sbjct: 242 FLFD 245



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 16/242 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVL 393
           + ++L I +  +V  +   I+  +          +  L  I  G        ++ R+V+ 
Sbjct: 19  IPFILAIAFIFIVWQIGAMISNNATLLPGPTVVMKTFLEFIVSGEAIEHTVASLLRIVLA 78

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            ++++ I IP+G+ +G    +   + P  +L+       + PL V               
Sbjct: 79  WVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAVLWFGIGLSGK----V 134

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            +++  + + IL N I+G         +   SF  +  R    I LP   P  VTG   +
Sbjct: 135 FVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRICLPAAMPTIVTGLRIS 194

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G AW A I +E+ +        +GLG  I +  E      V++G++I+       +   
Sbjct: 195 FGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMGMVIIGVVGFLFDAVF 248

Query: 574 WH 575
            H
Sbjct: 249 RH 250


>gi|42524163|ref|NP_969543.1| ABC transporter permease [Bdellovibrio bacteriovorus HD100]
 gi|39576371|emb|CAE80536.1| ABC transporter , permease component [Bdellovibrio bacteriovorus
           HD100]
          Length = 275

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 10/202 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   +     +I     + +RV +  +I   + +P+G+ +G    I   + P  Q+L   
Sbjct: 66  SKLAWYFSGELIRDLWESFYRVFLGFVIGGGLALPLGLLMGASQRIYDYMNPLIQVLRPI 125

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PL +          N     L+  G  + +L N I G  A  + +     +   
Sbjct: 126 PPIAYIPLAILWFGLG----NPPAVFLIALGAFFPVLMNTIVGVRAVDSIYIRAGKNLGA 181

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +  +R II+P   PY ++G     G  +   IV+E+ +         GLG  I E+ E
Sbjct: 182 GSFLMFRKIIVPAAMPYILSGVRIGIGTGFICMIVAEMIA------VNNGLGYRILEARE 235

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                +++ G+  +    LA++
Sbjct: 236 YFWSDKIIAGMFSIGLLGLAID 257



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 82/212 (38%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    +  R+    VI          L   S+R+   + P++ +++ IP + ++  
Sbjct: 74  GELIRDLWESFYRVFLGFVIGGGLALPLGLLMGASQRIYDYMNPLIQVLRPIPPIAYIPL 133

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A+F I     + +  +    +  +        ++     + 
Sbjct: 134 AILWFGLGNPP--------AVFLIALGAFFPVLMNTIVGVRAVDSIYIRAGKNLGAGSFL 185

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + VP +MP ++  + + +  G+  ++ +EMI V +      G+G  I  A +    
Sbjct: 186 MFRKIIVPAAMPYILSGVRIGIGTGFICMIVAEMIAVNN------GLGYRILEAREYFWS 239

Query: 239 LAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
             I+  M ++  +    D ++ R    ++ W 
Sbjct: 240 DKIIAGMFSIGLLGLAIDTVVSRLNNYLLRWH 271


>gi|13473801|ref|NP_105369.1| taurine transport system permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024552|dbj|BAB51155.1| taurine transport system permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 286

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 23/274 (8%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           + +  P    +  S + +S +  +         A       +        +  ++ VI  
Sbjct: 22  VPWSRPGPKRKGVSARMISAVTILVVLAAWALSARLQLVSPVFLPSPVAVWNKLIVVISD 81

Query: 383 GCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           G +          ++ RV   ++ A +I +PVG+ IG          P  + L   P   
Sbjct: 82  GFVDATLLQHTVASLGRVFAALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PLV+        +  L +++ M+      +  +  +G      +    A S   T  +
Sbjct: 142 YLPLVIIWFGIGEPSKILVIAIAMLA----PVALSTASGVRGVSQERINAARSLGATKRQ 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ILP   P  +TG   A G  W+  + +E+ +       T GLG  I  + +    
Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             V++G+L++      L    R +   L  +  R
Sbjct: 252 DVVIMGILVIAAIAFVLEFTIRRIERALVPWAGR 285



 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 103/259 (39%), Gaps = 27/259 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI----------TLDVHSLPQYASRTTLRML 73
           A  +++ +    L    +   P  +   V +               +L Q+   +  R+ 
Sbjct: 41  AVTILVVLAAWALSARLQLVSPVFLPSPVAVWNKLIVVISDGFVDATLLQHTVASLGRVF 100

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+V +LL           S     +  P+L+ ++ IP L +L   +++F    P K   
Sbjct: 101 AALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGEPSK--- 157

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I  I  + +  +  S    +  + ++    +RS   +  Q   ++ +P ++P ++
Sbjct: 158 -----ILVIAIAMLAPVALSTASGVRGVSQERINAARSLGATKRQVVRHVILPSALPSIL 212

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++  GW  +VA+E++          G+G  I  A +      ++  +L +  + F
Sbjct: 213 TGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVIMGILVIAAIAF 266

Query: 254 LY---DQLLFRPMIVWSNK 269
           +     + + R ++ W+ +
Sbjct: 267 VLEFTIRRIERALVPWAGR 285


>gi|257483752|ref|ZP_05637793.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|330987195|gb|EGH85298.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012097|gb|EGH92153.1| taurine ABC transporter permease [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 291

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 102/313 (32%), Gaps = 32/313 (10%)

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           RLE        DS  L    K    +    +   + S  + ++  L   L +        
Sbjct: 3   RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAITAGG 62

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +++       + +L   W     G      WQ +                     ++ R+
Sbjct: 63  WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLD-------------------ASLQRI 103

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +  IP+GI IG          P  +     P   + PL+V        +   
Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       I      G           A S   T W+  R+++LP   P  +TG 
Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273

Query: 571 ---RFLWHPLYLY 580
              R L   L  +
Sbjct: 274 LGLRALQRRLVPW 286



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  ++L           +R    +  P+++  + IP L +L  
Sbjct: 90  ATLWQHLDASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287


>gi|183598093|ref|ZP_02959586.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827]
 gi|188020250|gb|EDU58290.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827]
          Length = 392

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 23/243 (9%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P+   ++ F L+   +   + GI        I  I   +         A  T   +L++
Sbjct: 139 LPSPIAIILFALIAWQLAGRVMGIATFVSMIVIGAIGAWS--------EAMVTLSLVLTS 190

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++  L+         A+S +   ++ PILD MQ+ P   +L   V+ F     G V G  
Sbjct: 191 LLFCLIIGLPLGIWLARSDKAASIVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVV 247

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +  IFA     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  
Sbjct: 248 VTIIFA-----LPPIIRLTILGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAG 302

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  ++      VV + MI VG       G+G  +   I   D+       + ++ +  + 
Sbjct: 303 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIVL 355

Query: 256 DQL 258
           D+L
Sbjct: 356 DRL 358



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      +   +   IAWQ  G ++   T+  ++ +  +G  +     +  V+  ++  
Sbjct: 135 LLTSLPSPIAIILFALIAWQLAGRVMGIATFVSMIVIGAIGAWSEAMVTLSLVLTSLLFC 194

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+      +S ++P    +   PA V+   +V          N+   ++ I
Sbjct: 195 LIIGLPLGIWLARSDKAASIVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 250

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 251 IFALPPIIRLTILGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLA 310

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 311 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIVLDRL 358


>gi|327193789|gb|EGE60666.1| aliphatic sulfonate ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 381

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 22/253 (8%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L R+ G ++             + V   L   +  ++  +A+     + G+I        
Sbjct: 107 LPRSFGRLKSSASNRPTFASHVRGVLASLLPRYGLLIAFLALWQVSSTRGWINPAIFPPL 166

Query: 376 --VLYVIWL----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             +L  +W             I++ R       A +I IP+G+++G    +   + P  Q
Sbjct: 167 NVILSALWTNLANGALLDDIAISLQRSGTAFAFAVVIGIPLGLFMGQFRAVEQALDPILQ 226

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L     A   +P+ +  +     +       ++ + T + +L   I G         E+A
Sbjct: 227 LFRQTSALALYPVFILLLGLGETSK----IFVIFWATLFPVLLATIGGVKEVDQKLIEMA 282

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++       +R +ILP   P    G   +   A    I +E+           G+G  +
Sbjct: 283 RTYGAGSLTVFRRVILPASVPAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQV 336

Query: 544 AESTEKGSFPEVV 556
             +      P + 
Sbjct: 337 MNAQYNFQIPLMF 349



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
           + P    L+AF+ +  + +           P ++ +  +   L   +L    + +  R  
Sbjct: 135 LLPRYGLLIAFLALWQVSSTRGWINPAIFPPLNVILSALWTNLANGALLDDIAISLQRSG 194

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 195 TAFAFAVVIGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGLG------- 247

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  +    +  + + L E++R++       F  + +P S+P + 
Sbjct: 248 -ETSKIFVIFWATLFPVLLATIGGVKEVDQKLIEMARTYGAGSLTVFRRVILPASVPAIF 306

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 307 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 349


>gi|224370190|ref|YP_002604354.1| NtrB [Desulfobacterium autotrophicum HRM2]
 gi|223692907|gb|ACN16190.1| NtrB [Desulfobacterium autotrophicum HRM2]
          Length = 297

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 100/288 (34%), Gaps = 20/288 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCR----TLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           F  ++    W     L    + + R    T G                     +L + W 
Sbjct: 4   FFPWVRLRPWKGRRRLKLIDRLVWRPSQNTKGGYGLSASGGESGAGYEVFGISLLVVVWV 63

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------ITMFRVVVLIIIASIIWIP 403
                     A +     +   T + +   +  G        ++ RV++ I IAS++ IP
Sbjct: 64  LAGTFFLSSRALEPFNQFLPVPTLKALGIAVTQGHFWVSVWASLRRVLLGITIASVLGIP 123

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI IGF P + S      Q L       + P+ +     +       +  L++  T W 
Sbjct: 124 GGIVIGFYPRLRSLSYSPIQFLRMISPLSWMPVALIVFVQF----ESAIVFLIVMATVWP 179

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ N   G       +  +A +     ++    II+P   P  +T    A G AW   + 
Sbjct: 180 IMLNTATGVGNVNPSWIRMAMNQGANHFQLIWTIIVPVSLPNVLTSLRLALGIAWIVLVP 239

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +E          ++GLG  I ++ +  S+  ++  ++ +      L+R
Sbjct: 240 AEFLG------VSSGLGYLINDARDTMSYDVLMAMIIAIGILGFLLDR 281



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 91/244 (37%), Gaps = 19/244 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +F +   V+V  +        +         P   +  + I +           +  R+L
Sbjct: 52  VFGISLLVVVWVLAGTFFLSSRALEPFNQFLPVPTLKALGIAVTQGHFWVSVWASLRRVL 111

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + I+ +       +     RL  +    +  ++ I  L ++   ++ F+         
Sbjct: 112 LGITIASVLGIPGGIVIGFYPRLRSLSYSPIQFLRMISPLSWMPVALIVFVQF------- 164

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F I  + VW +  +    + N+      ++ +   + +Q  W + VP S+P ++
Sbjct: 165 -ESAIVFLIVMATVWPIMLNTATGVGNVNPSWIRMAMNQGANHFQLIWTIIVPVSLPNVL 223

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ +++   W  +V +E + V        G+G  I  A        ++  ++ +  + F
Sbjct: 224 TSLRLALGIAWIVLVPAEFLGVSS------GLGYLINDARDTMSYDVLMAMIIAIGILGF 277

Query: 254 LYDQ 257
           L D+
Sbjct: 278 LLDR 281


>gi|289661671|ref|ZP_06483252.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 326

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 15/225 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +    L Q+ + ++ R    + I     F    L   SR    +L 
Sbjct: 101 LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLD 160

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 161 SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGVRSV 212

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R++ L G Q FW + +P ++P ++  +   +   W  ++ +E I        
Sbjct: 213 DPALIEMARNYGLRGPQLFWDVLLPGALPSILVGIRFGLGLMWLTLIVAETISASS---- 268

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             GIG     A +      ++ A++    +  L D L  R +  W
Sbjct: 269 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 310



 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  V + I   I   +G+  G        +    Q+L   P     PLV+     
Sbjct: 125 AISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLDSALQMLRNVPHLALIPLVILWFGI 184

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G  +      E+A ++ + G + +  ++LPG  
Sbjct: 185 ----DEGAKLFLVALGTFFPIYLNTYHGVRSVDPALIEMARNYGLRGPQLFWDVLLPGAL 240

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G  W   IV+E  S       ++G+G     + E      VV+ +++  
Sbjct: 241 PSILVGIRFGLGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 294

Query: 564 CFVLALN 570
                 +
Sbjct: 295 LLGKLAD 301


>gi|308188379|ref|YP_003932510.1| Taurine transport permease protein tauC [Pantoea vagans C9-1]
 gi|308058889|gb|ADO11061.1| Taurine transport permease protein tauC [Pantoea vagans C9-1]
          Length = 275

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 96/273 (35%), Gaps = 15/273 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R      F        L  +  +     +    ++  + +    Q    ++   + 
Sbjct: 9   SLPVRRRLRWPFSTAFTLSVLSLSLLLLLWWGVTALGLIAPLFLPSPQQVFSKLLVIASA 68

Query: 374 QDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           Q  +          ++ R+++ +  A+ I IPVGI +G  P     + P  ++    P  
Sbjct: 69  QGFMDATLWQHLAASLTRMLIALTAAAAIGIPVGILMGLSPVARGLLDPLIEIYRPIPPL 128

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL+V        +      LL+       +  + +AG           A S     W
Sbjct: 129 AYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLSTLAGVRNTQQVRIRAARSLGANRW 184

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +
Sbjct: 185 QLLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLA 238

Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
              V+ G+ ++     +L    R L   L  + 
Sbjct: 239 TDVVLAGIAVIAFIAFSLELGLRALQRRLTPWS 271



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V  +G+I  L     +    + +V          +L Q+ + +  RML A+  +      
Sbjct: 41  VTALGLIAPLFLPSPQQVFSKLLVIASAQGFMDATLWQHLAASLTRMLIALTAAAAIGIP 100

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L   S     +L P+++I + IP L +L   V++F           E + I  I+ +
Sbjct: 101 VGILMGLSPVARGLLDPLIEIYRPIPPLAYLPLMVIWFGIG--------ETSKILLIYLA 152

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +T S    + N  +     +RS   + WQ   ++ +P ++P ++  + + +  GW 
Sbjct: 153 IFAPVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWS 212

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            +VA+E+I          G+G  +  A  E     ++ A + ++  I    +L  R +  
Sbjct: 213 TLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAFIAFSLELGLRALQR 265

Query: 266 WSNKFRLERT 275
               +  E++
Sbjct: 266 RLTPWSGEQS 275


>gi|299132234|ref|ZP_07025429.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298592371|gb|EFI52571.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 277

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++     +      +  RVVV  +I + + +P+G+ +G    I     P  ++L   P 
Sbjct: 69  LSWALSGELPLDAFASFQRVVVGFLIGAGLALPLGLLMGANDKIYRLFNPLIEVLRPIPP 128

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + +L N IAG       +   A +  ++ 
Sbjct: 129 IAYIPLAILWFGLG----NPPAYFLISIGAFFPVLLNTIAGVRHVDGIYIRAARNLGVSQ 184

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++ +  +ILP   PY ++GA    G A+   IV+E+ +        +GLG  I E+ E  
Sbjct: 185 YQMFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIA------VNSGLGFRILEAREYF 238

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +++ G+  +    L ++
Sbjct: 239 WSDKIIAGMFTIGFLGLGID 258



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP  A  +  R++   +I          L   + ++  +  P++++++ IP + ++  
Sbjct: 75  GELPLDAFASFQRVVVGFLIGAGLALPLGLLMGANDKIYRLFNPLIEVLRPIPPIAYIPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + ++       +R+  +S +Q
Sbjct: 135 AILWFGLGNPP--------AYFLISIGAFFPVLLNTIAGVRHVDGIYIRAARNLGVSQYQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++    + M   +  V+ +EMI V        G+G  I  A +    
Sbjct: 187 MFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIAVNS------GLGFRILEAREYFWS 240

Query: 239 LAILYAMLTMLGVIFLYDQLLFRP---MIVWS 267
             I+  M T+  +    D ++ R    ++ W 
Sbjct: 241 DKIIAGMFTIGFLGLGIDTVMTRINNHLLRWH 272


>gi|152985321|ref|YP_001347063.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960479|gb|ABR82504.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 274

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 23/284 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55
           + L   +     R   P  +   A  L+       ++ +      +   P  I+  + + 
Sbjct: 6   LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   +  R+ +   I         T    SRR    L P    +++IP L +
Sbjct: 65  LARGELWGHVGASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F      K++   L A F ++         ++   +  + R   E+ R +RLS
Sbjct: 125 VPLLLLWFGIDETPKIVLIVLGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +     + +P ++P L   +  ++S  W F+VA+E+I          G+G  ++   + 
Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276
                ++ A+L +  +  L D L   L R  + W + F  E   
Sbjct: 231 SRPDLVIAAILVLATLGKLSDGLLRSLERRALRWRDSFDGEGGA 274



 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 19/265 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368
              +++ R    +R         L      S+  ++ + W       A      ++  + 
Sbjct: 7   RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +  V         ++ RV     I S + + VG W+G      + ++P  Q L A 
Sbjct: 67  RGELWGHVG-------ASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAI 119

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL++               +L++ G  + +   ++AG       + E+   + +
Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIVLGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + +   R I+LP   P   TG   A   +W   + +E+ +       T GLG  +++  E
Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 V+  +L++       +  L
Sbjct: 230 TSRPDLVIAAILVLATLGKLSDGLL 254


>gi|291619197|ref|YP_003521939.1| TauC [Pantoea ananatis LMG 20103]
 gi|291154227|gb|ADD78811.1| TauC [Pantoea ananatis LMG 20103]
          Length = 276

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 19/271 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           T+   R  +P +     S   +  +L ++W     G+   +   S   +V+         
Sbjct: 11  TVRHRRLRWPFSTSFTLSALSLLVLLFVWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQ 70

Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +      ++ R+++ +  A+ I IPVGI +G  P + + I P  +L    P   
Sbjct: 71  GFMDATLWQHLSASLTRMLIALTAAAAIGIPVGIAMGISPVVRALIDPLIELYRPVPPLA 130

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL+V        +      LL+       ++ + +AG           A+S   T W+
Sbjct: 131 YLPLMVIWFGIGETSK----ILLIYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQ 186

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  + 
Sbjct: 187 QLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 240

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
             V+ G+ ++      L    R L   L  +
Sbjct: 241 DVVLAGIAVIAVIAFGLELSLRALQRRLTPW 271



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 19/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  +G+I  L     +  V + ++   P      +L Q+ S +  RML A+  +  
Sbjct: 38  VWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDATLWQHLSASLTRMLIALTAAAA 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  ++ P++++ + +P L +L   V++F           E + I  
Sbjct: 98  IGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     + S   + WQ+  ++ +P ++P ++  + + + 
Sbjct: 150 IYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF----LYDQ 257
            GW  +VA+E+I          G+G  +  A  E     ++ A + ++ VI     L  +
Sbjct: 210 VGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFGLELSLR 262

Query: 258 LLFRPMIVW 266
            L R +  W
Sbjct: 263 ALQRRLTPW 271


>gi|15964788|ref|NP_385141.1| putative permease protein [Sinorhizobium meliloti 1021]
 gi|307309676|ref|ZP_07589328.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307319473|ref|ZP_07598900.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15073966|emb|CAC45607.1| Probable glycine betaine ABC transporter, permease [Sinorhizobium
           meliloti 1021]
 gi|306894845|gb|EFN25604.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306899888|gb|EFN30511.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 295

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     +T   +    V+S+        + ++S R   ++ P+LD+MQ++P   +L   V
Sbjct: 96  MWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S WQK 
Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 KNVQMPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 88/282 (31%), Gaps = 18/282 (6%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           R     + I     +F     + ++     L     H      +      +  +  I WF
Sbjct: 14  RLRQLKKIIDEGFRSFTRAYGDAIESFFDPLQFFLIHAERFMTRTPWPIILILIAVIAWF 73

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                      W+ +   +        L +      T+  + V  +++  I IP+GI + 
Sbjct: 74  A-------SRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMS 126

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                 + + P   ++   P+ V+   VV  +        +   + ++      ++    
Sbjct: 127 RSDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTN 182

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G      D  E A +F  + W+  + + +P   P  + G       A    +++ +   
Sbjct: 183 LGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIG- 241

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                   GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|327395527|dbj|BAK12949.1| taurine transport system permease protein TauC [Pantoea ananatis
           AJ13355]
          Length = 276

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R  +P +     S   +  +L ++W     G+   +   S   +V+              
Sbjct: 16  RLRWPFSTSFTLSALSLLVLLFVWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDA 75

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++ R+++ +  A+ I IPVGI +G  P + + I P  +L    P   + PL+
Sbjct: 76  TLWQHLSASLTRMLIALTAAAAIGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLM 135

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V        +      LL+       ++ + +AG           A+S   T W+  R++
Sbjct: 136 VIWFGIGETSK----ILLIYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWV 191

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ 
Sbjct: 192 ILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 245

Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580
           G+ ++      L    R L   L  +
Sbjct: 246 GIAVIAVIAFGLELSLRALQRRLTPW 271



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 19/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  +G+I  L     +  V + ++   P      +L Q+ S +  RML A+  +  
Sbjct: 38  VWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDATLWQHLSASLTRMLIALTAAAA 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  ++ P++++ + +P L +L   V++F           E + I  
Sbjct: 98  IGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     + S   + WQ+  ++ +P ++P ++  + + + 
Sbjct: 150 IYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF----LYDQ 257
            GW  +VA+E+I          G+G  +  A  E     ++ A + ++ VI     L  +
Sbjct: 210 VGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFGLELSLR 262

Query: 258 LLFRPMIVW 266
            L R +  W
Sbjct: 263 ALQRRLTPW 271


>gi|259910017|ref|YP_002650373.1| taurine transporter subunit [Erwinia pyrifoliae Ep1/96]
 gi|224965639|emb|CAX57171.1| Taurine ABC transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283480113|emb|CAY76029.1| Taurine transport permease protein tauC [Erwinia pyrifoliae DSM
           12163]
          Length = 275

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
              +P       S   +  +L ++W      ++  + +    Q    ++        +  
Sbjct: 15  PLRWPLRRRLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLMAIAGPTGFMDA 74

Query: 380 IWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL+
Sbjct: 75  TLWQHLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLM 134

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V        +      LL+       +  + +AG           A S   + W+   ++
Sbjct: 135 VIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWFV 190

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ 
Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244

Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580
           G+ ++     AL    R L H L  +
Sbjct: 245 GITVIALIAFALELALRALQHRLTPW 270



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 112/260 (43%), Gaps = 21/260 (8%)

Query: 10  FISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQ 63
            + RR+  ++  LL  ++V   +  + L        P+ +   +     P      +L Q
Sbjct: 19  PLRRRLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLMAIAGPTGFMDATLWQ 78

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + +  R++ A++ +++       L   +  L  +L P++++ + +P L +L   V++F
Sbjct: 79  HLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWF 138

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E + I  I+ +    +  S    + N  +     +RS   S WQ  W++
Sbjct: 139 GIG--------ETSKILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWFV 190

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A  E     ++ 
Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVL 243

Query: 244 AMLTMLGVIFLYDQLLFRPM 263
           A +T++ +I    +L  R +
Sbjct: 244 AGITVIALIAFALELALRAL 263


>gi|315635363|ref|ZP_07890630.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Arcobacter butzleri JV22]
 gi|315480348|gb|EFU71014.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Arcobacter butzleri JV22]
          Length = 261

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 105/253 (41%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  V+   ++   L   +    P D++           L  +   +  R L  ++I   
Sbjct: 22  VLVLVVWQIVVQSGLVSSRVMPAPLDVISAGVTLTANGELIHHFLVSLQRALLGLIIGGS 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+   +   S+    +L   + ++++IP+L  +   +++F           E + IF 
Sbjct: 82  IGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFGIG--------EFSKIFL 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + +  + +  L ++ +DL E+ + + L+ ++ F  + +P +MP ++  + MS+ 
Sbjct: 134 LALAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLG 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W +++ +E I   +      GIG     A +      ++  +L    +  + D L   
Sbjct: 194 FMWLYLIVAETIASSE------GIGYMTMNAREFLQTDIMVLGILLYAVLGKISDILASV 247

Query: 259 LFRPMIVWSNKFR 271
           L +  + W   ++
Sbjct: 248 LEKRYLKWHKGYQ 260



 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +  ++ + W  VV    +   +    +  I    T      +I    +++ R ++ +II 
Sbjct: 20  IPVLVLVVWQIVVQSGLVSSRVMPAPLDVISAGVTLTANGELIHHFLVSLQRALLGLIIG 79

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I   +G   G      + +    Q++   P     PLV+        +       L+ 
Sbjct: 80  GSIGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFGIGEFSK----IFLLA 135

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               + I  N   G  +   D  E+   + +  +  ++ IILPG  P  + G   + G  
Sbjct: 136 LAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLGFM 195

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  +       + G+G     + E      +VLG+L+        +  
Sbjct: 196 WLYLIVAETIA------SSEGIGYMTMNAREFLQTDIMVLGILLYAVLGKISDIL 244


>gi|303229820|ref|ZP_07316600.1| ABC transporter, permease protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515580|gb|EFL57542.1| ABC transporter, permease protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 250

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++  L       + G    +       +V          +      ++ R  +  II+ +
Sbjct: 12  IAAWLIWELIVCLGGFNEALLPTPYKVLVGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  +I  L          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FIAAWLIWELIVCLGGFNEALLPTPYKVLVGFGELIGDGVLFKDIADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +  +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|154251521|ref|YP_001412345.1| substrate-binding region of ABC-type glycine betaine transport
           system [Parvibaculum lavamentivorans DS-1]
 gi|154155471|gb|ABS62688.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Parvibaculum lavamentivorans DS-1]
          Length = 633

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 16/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  +++++ +     H  +   +P  I+  +   +    L   A +T   ML ++  ++L
Sbjct: 397 LPWWLIILAVAGAAWHASRHFALPV-ILAGLLFLIGTLGLWDLAIQTLALMLVSVFFAVL 455

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A S     +++P+LD MQ++P   +L   ++ F           ++ A+FA
Sbjct: 456 IGLPSGIAIAASDIARRIVLPVLDAMQTLPSFVYLIPALMLFGLG--------KVPALFA 507

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +   +   L  + R L E++       W++   + +P ++P ++  +  +  
Sbjct: 508 TVIYATPPLIRLVDLGLRTVDRQLVEMAADLGADKWRQLIDIKLPLALPSIMAGVNQTTM 567

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G  + L I+  D+   L A + ++ +  ++D++
Sbjct: 568 MALSMVVIASMI-------GARGLGEEVLLGIQRLDIGRGLAAGIAIVALAIVFDRI 617



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 18/254 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--- 381
           FH    +L        + +  + W+ ++  VA G AW +  +         +L++I    
Sbjct: 376 FHAASGWLLALIVALEAGLGALPWWLIILAVA-GAAWHASRHFALPVILAGLLFLIGTLG 434

Query: 382 ---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              L   T+  ++V +  A +I +P GI I         + P    +   P+ V+    +
Sbjct: 435 LWDLAIQTLALMLVSVFFAVLIGLPSGIAIAASDIARRIVLPVLDAMQTLPSFVYLIPAL 494

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +      +      ++  V  G         E+A+      WR    I 
Sbjct: 495 MLFGLG----KVPALFATVIYATPPLIRLVDLGLRTVDRQLVEMAADLGADKWRQLIDIK 550

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G       A +  +++ +           GLG  +    ++      +  
Sbjct: 551 LPLALPSIMAGVNQTTMMALSMVVIASMIG-------ARGLGEEVLLGIQRLDIGRGLAA 603

Query: 559 VLIMCCFVLALNRF 572
            + +    +  +R 
Sbjct: 604 GIAIVALAIVFDRI 617


>gi|125623880|ref|YP_001032363.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|6119854|gb|AAF04259.1|AF139575_2 glycine-betaine binding permease protein [Lactococcus lactis]
 gi|7212814|gb|AAF40474.1|AF184955_2 OpuABC [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492688|emb|CAL97642.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300070654|gb|ADJ60054.1| glycine betaine-binding periplasmic protein precursor [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 573

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               + V+ I+ IL+ G +        + +  I      L      T   +L + ++S++
Sbjct: 53  FWLMIAVVTILAILVSGKKFAFPLFAFIGLCLIA--NQGLWSDLMSTITLVLLSSLLSII 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 111 IGVPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA 167

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +          +  +  +L E + SF  +  QK + L  P +   ++  +  ++ 
Sbjct: 168 -----LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIM 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI         PG+G  +  A++  D+     + ++++ +  + D+ 
Sbjct: 223 LALSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 75/231 (32%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401
           FW  +     + I      +    F +  +  +   G       T+  V++  +++ II 
Sbjct: 53  FWLMIAVVTILAILVSGKKFAFPLFAFIGLCLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GIW+     ++  +QP    +   P  V+    V+      +       +       
Sbjct: 113 VPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
              +     G      +  E A SF  T  +    +  P      + G       A +  
Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +  + +     +  +  + +    + ++RF
Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272


>gi|332162774|ref|YP_004299351.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667004|gb|ADZ43648.1| glycine betaine transporter membrane protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330861135|emb|CBX71398.1| glycine betaine/L-proline transport system permease protein proW
           [Yersinia enterocolitica W22703]
          Length = 376

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 121 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 180

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 181 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 237

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 238 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 292

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 293 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 343



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 83  PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 128

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 129 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 181

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 182 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 237

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 238 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 297

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 298 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 343


>gi|91762952|ref|ZP_01264917.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91718754|gb|EAS85404.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 717

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 95/545 (17%), Positives = 181/545 (33%), Gaps = 55/545 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I + V    + + +T   +L A  +S +F      +A KS+R+  +L PIL +MQ++P  
Sbjct: 189 IYISVFGQWKPSMQTLSFILVAAPLSFIFGLTLGVMAFKSKRVEKLLYPILLVMQTMPQY 248

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +V F           + AA+       V  M       L  IP ++ E  R   
Sbjct: 249 AVLVPAIVLFGIG--------DHAAVIITMVVAVPPMILLTLLGLRGIPPEVIEAGRMSG 300

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            + WQ    + +P +   ++  +          ++    + V    I   G+G  + LA+
Sbjct: 301 CNNWQLMTKVLIPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLAL 353

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            + ++   L A L +  +  L D++     + W+NK         Y   +  +  F    
Sbjct: 354 NQLNIGLALEAGLCISLIAILLDKMS----LAWANKQIDYFGNLTYFQRNKNILFFAAAV 409

Query: 294 FLRFI-----------------------GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L  I                       G S+ +F++   + +         I   +   
Sbjct: 410 ILGIIFSYLGSFYFKDGSNYLFEVPHNKGISTADFWNKGVDWIWDTFFHTLKIFNTWLIV 469

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFR 389
            +          M  +    +V G    I       +V   T    L   W    +T++ 
Sbjct: 470 DVLQPMRALYLRMPAVATLVLVIGAGYIIGGIRSALVVGGLTLFIALSPWWDRALVTLYM 529

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
               + I++II   VGI      H ++ +     +   FP+ V+   V+        +  
Sbjct: 530 ATFGVFISTIIGFTVGILSFQNKHTANFMLGVCDIFQTFPSFVYLIPVMMLFGVTDTSVL 589

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + + +        Y     I G  + P    + A+   +T  +    I  P  FP+ + G
Sbjct: 590 IAVIVYATIPATRY----TIEGLRSVPEALHDAATMSGVTKVQRLLKIEFPLAFPHMMLG 645

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLA 568
                  A    I+               LG YI ++        + L + L +    L 
Sbjct: 646 LNQTIVFALFMVIIGAFIGTED-------LGQYILKALSDKKGAGIGLTLGLCVAFIGLI 698

Query: 569 LNRFL 573
            +  +
Sbjct: 699 FDHLI 703


>gi|116512254|ref|YP_809470.1| ABC-type proline/glycine betaine transport system, permease
           component [Lactococcus lactis subsp. cremoris SK11]
 gi|116107908|gb|ABJ73048.1| ABC-type proline/glycine betaine transport system, permease
           component [Lactococcus lactis subsp. cremoris SK11]
          Length = 573

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               + V+ I+ IL+ G +        + +  I      L      T   +L + ++S++
Sbjct: 53  FWLMIAVVTILAILVSGKKFAFPLFTFIGLCLIA--NQGLWSDLMSTITLVLLSSLLSII 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 111 IGVPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA 167

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +          +  +  +L E + SF  +  QK + L  P +   ++  +  ++ 
Sbjct: 168 -----LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIM 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI         PG+G  +  A++  D+     + ++++ +  + D+ 
Sbjct: 223 LALSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401
           FW  +     + I      +    FT+  +  +   G       T+  V++  +++ II 
Sbjct: 53  FWLMIAVVTILAILVSGKKFAFPLFTFIGLCLIANQGLWSDLMSTITLVLLSSLLSIIIG 112

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GIW+     ++  +QP    +   P  V+    V+      +       +       
Sbjct: 113 VPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
              +     G      +  E A SF  T  +    +  P      + G       A +  
Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +  + +     +  +  + +    + ++RF
Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272


>gi|83644216|ref|YP_432651.1| glycine betaine transporter membrane protein [Hahella chejuensis
           KCTC 2396]
 gi|83632259|gb|ABC28226.1| ABC-type proline/glycine betaine transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 369

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79
            L A    I I+   L   Q +     +  ++ +TL  +      A  T   +L++++  
Sbjct: 110 GLQAIPATIVILFFALLAWQLSGRKLAVGSLISLTLVGLIGAWNEAMVTLALVLTSVLFC 169

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           LL         A+S R    + P+LD MQ+ P   +L   V+ F     G V G  +  I
Sbjct: 170 LLIGLPTGIWLARSDRAASAVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVAVTII 226

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA     +  +       +  +P DL E +RSF  S  Q  + + +P + P ++  +  +
Sbjct: 227 FA-----LPPLIRLTSLGIRQVPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQT 281

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI VG       G+G  +   I   D+       + ++ +  + D++
Sbjct: 282 LMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVLLAIMLDRM 333



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 90/280 (32%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +          L   V         +R+        + +  +      +  F  +
Sbjct: 66  PFQDAVIPLDSWVEQGLDWVVNHFRPVFQAVRWPIDITLSSIEAGLQAIPATIVILFFAL 125

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++G ++   T   ++       +T+  V+  ++   +I +P GIW+    
Sbjct: 126 LAWQLSGRKLAVGSLI-SLTLVGLIGAWNEAMVTLALVLTSVLFCLLIGLPTGIWLARSD 184

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +S ++P    +   PA V+   +V      ++       +         ++     G 
Sbjct: 185 RAASAVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVAVTIIF----ALPPLIRLTSLGI 240

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A SF  +  +    + LP   P  + G       A +  +++ + + G  
Sbjct: 241 RQVPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQTLMLALSMVVIASMIAVG-- 298

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 299 -----GLGQMVLRGIGRLDMGLATVGGVGIVLLAIMLDRM 333


>gi|330508590|ref|YP_004385018.1| ABC transporter permease [Methanosaeta concilii GP-6]
 gi|328929398|gb|AEB69200.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
          Length = 240

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 89/245 (36%), Gaps = 13/245 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ML   W      +   +   S   +V  F       ++    ++     + +    +I +
Sbjct: 1   MLIALWETAAFLIDDRLILPSFSQVVFAFMENWRSILLDDLPVSALHFAIGMAGGLLIAL 60

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G+   + S   P  ++L   P   + P  +          N     ++  G  +
Sbjct: 61  PIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPFAIIWFGIT----NTAAGFIIFIGAVF 116

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            IL N   G  + P  + E A     T      RY+ LP   P    G   A G AW   
Sbjct: 117 PILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIAWMCL 176

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           + +E+       +   GLG  I +S       EV + ++++    LA++R      Y+  
Sbjct: 177 VAAEMFG-----VSKNGLGFKIWDSYGHYRMDEVFMYMIVLGLLGLAIDRTFR---YVVE 228

Query: 582 TRCLR 586
            R L+
Sbjct: 229 ERMLK 233



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 14/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L     M   LL       +    + L  +  PI++I++ IP L ++ F +++F    
Sbjct: 44  SALHFAIGMAGGLLIALPIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPFAIIWFGI-- 101

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVP 186
                    AA F IF   V+ +  + Y    ++PR   E ++    +       Y+ +P
Sbjct: 102 ------TNTAAGFIIFIGAVFPILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALP 155

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +S+P +   + ++M   W  +VA+EM  V        G+G  I  +     +  +   M+
Sbjct: 156 YSLPSIAAGIRIAMGIAWMCLVAAEMFGVSKN-----GLGFKIWDSYGHYRMDEVFMYMI 210

Query: 247 TMLGVIFLYDQ 257
            +  +    D+
Sbjct: 211 VLGLLGLAIDR 221


>gi|326780348|ref|ZP_08239613.1| ABC-type glycine betaine transport, periplasmic subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326660681|gb|EGE45527.1| ABC-type glycine betaine transport, periplasmic subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 873

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           ++  GI+ ++   ++    P  ++  V   L D   L   A  T   +L A +++L+   
Sbjct: 49  LIFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A++SR +  +  P+LD MQ++P + +L   V++F     G V G     IFA+  
Sbjct: 107 PLGIWASRSRTVSAITRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +       + +P ++P ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 11/227 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362
           F  PL   V      L        +    + S     ++ +L      +  G+   IAW 
Sbjct: 2   FRLPLGEWVDSAVDWLQTHLAWLFDAISSVVSGMFDGIAAVLSAPAPLIFAGIVAVIAWW 61

Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             G      T+     +    +W   + T+  V+V  ++  +I +P+GIW      +S+ 
Sbjct: 62  LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSRTVSAI 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +P    +   PA V+    V       +   +   +          +     G      
Sbjct: 122 TRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|56696434|ref|YP_166791.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56678171|gb|AAV94837.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 658

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 75/543 (13%), Positives = 169/543 (31%), Gaps = 48/543 (8%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
              +R +PNI  +    +   +  ++ + +    +          T  +      A +T 
Sbjct: 94  LFGKRRWPNIGPIPWSAIA-AMTAVVGYYLGGWRMALLAGGTFVWTAMIGQ-WDIAMQTM 151

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             ++ A  ++     V    A KS     VL P+L ++Q++P   +L   V++F     G
Sbjct: 152 SVLVVAAPLAFAIGLVLGISAWKSPSFDAVLRPVLAVLQTLPFFTYLLPAVIFFKV---G 208

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              GA    ++AI       M       L  +  ++ E  +    + WQ   ++ +P + 
Sbjct: 209 PTAGAVATTVYAIP-----PMILMTTLGLQKVSPEVVEAGKMSGCTRWQMLRHVYIPAAR 263

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  +          ++    +VV    I +PG+G+ +   +    +       +T++
Sbjct: 264 TEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKIGRSFEIGVTIV 316

Query: 250 GVIFLYDQLLFRPMIVWSNKFR---------------------LERTTGIYPADSWVLYL 288
            +    D++    ++     F                            + P  S V   
Sbjct: 317 LLAVTLDRMSKAWVVKLPEHFERGTPFWIRHKFLLMAIGAFVGFTLIAQVVPILSEVGRK 376

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
              +                    +    R +  I    P     L        +     
Sbjct: 377 QSWSQGKEIDTLIKGFLAIDAVQAITNSIRYVLNIWVLNPLRDFMLSIPTVAFVLFISAA 436

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             +V G    +   +   +V    + D         IT++ V+  + IA ++ +P+G+  
Sbjct: 437 ALLVAGRREAVLAAAFFGLVALTGWWD------RSVITLYSVLAAVSIALLLGVPIGVVA 490

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
             +   ++ +         FP+ ++    +        +  + + +  +     Y     
Sbjct: 491 ARKEKTANAVLLACDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFSMVPLVRY----T 546

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           I G    P++  E A     T  +    + LP   P    G   A   A+   I++    
Sbjct: 547 IEGLRNVPDEMTEAADMAGATRMQKLWNVQLPLALPTMAVGFNQAIMFAFFMVIIAAFIG 606

Query: 529 WGH 531
              
Sbjct: 607 TQD 609



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 93/240 (38%), Gaps = 19/240 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +AFVL I    +L+ G +E  +      +V +T         +  T   +L+A+ I+LL
Sbjct: 426 TVAFVLFISAAALLVAGRREAVLAAAFFGLVALT----GWWDRSVITLYSVLAAVSIALL 481

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +AA+  +    ++   D  Q+ P   +L   ++ F             + + +
Sbjct: 482 LGVPIGVVAARKEKTANAVLLACDTAQTFPSFIYLIPAIMLFGI--------TATSVVMS 533

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  +     + L N+P ++ E +     +  QK W + +P ++P +      ++ 
Sbjct: 534 ILIFSMVPLVRYTIEGLRNVPDEMTEAADMAGATRMQKLWNVQLPLALPTMAVGFNQAIM 593

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +F V+ +  I   D       +G  +   +   DL       + +  +   +D ++ +
Sbjct: 594 FAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKNFVLGICVTLMALTFDMVIMK 646


>gi|332716766|ref|YP_004444232.1| glycine betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325063451|gb|ADY67141.1| glycine betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 295

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +VI I+ +L      +     +   +   +    + +   +T   +    V+S++    
Sbjct: 61  PVVILIVGVLAWFASRSATIVGLCCGILFAIGWFGMWEDTMKTISMIFVCAVLSIVIGLP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S RL  ++ P+LD+MQ++P   +L   V+       G+V G     I+AI   
Sbjct: 121 IGIAMARSNRLQSIVNPVLDVMQTMPSFVYLIPVVMLLG---IGRVPGVIAVVIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  + RD+ E + ++  S  QK + + +P ++P ++  +  ++     
Sbjct: 176 ---PMIRLTNLGIRMVDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 29/281 (10%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
             F R  G +    F+PL + +    R L    +              +  +  + WF  
Sbjct: 27  RGFTRAYGGTIEGLFTPLQSFLIWAERLLIGTPWPVV-----------ILIVGVLAWFAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +G+    +  I     ++D          T+  + V  +++ +I +P+GI +   
Sbjct: 76  RSATIVGLCCGILFAIGWFGMWED-------TMKTISMIFVCAVLSIVIGLPIGIAMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + S + P   ++   P+ V+   VV  +    +   + + +  I      ++     G
Sbjct: 129 NRLQSIVNPVLDVMQTMPSFVYLIPVVMLLGIGRVPGVIAVVIYAI----PPMIRLTNLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A ++  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRMVDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  + ++     F   V   L +    +  +R 
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278


>gi|295399447|ref|ZP_06809429.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978913|gb|EFG54509.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 279

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 91/254 (35%), Gaps = 13/254 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
               + +   +  +       +   V+  +    +  +   +       +     +++FR
Sbjct: 28  RKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTHLKVSVFR 87

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            V   ++ + I +  GI +GF       + P  Q+L   P     PL +    +   +  
Sbjct: 88  AVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSK- 146

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G         +VA   H + W+    +I+P   P  ++G
Sbjct: 147 ---VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSG 203

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              + G AW   +V+E+         T G+G  + ++ +  +   V +G+++        
Sbjct: 204 IRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLT 257

Query: 570 N---RFLWHPLYLY 580
           +   R L   L  +
Sbjct: 258 DSLVRVLEKRLLRW 271



 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 19/270 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQY 64
           +P F   R +     L  F+L I  +  +   + +T    P DIV           L  +
Sbjct: 21  IPAFGQFRKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTH 80

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R ++  ++      +       S +   VL P + ++++IP L      +++F 
Sbjct: 81  LKVSVFRAVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFG 140

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                KV+     A F ++         + +  +  +   L +V+R    S W+K   L 
Sbjct: 141 FGETSKVLLIAKGAFFPVYV--------NTFIGIRGVDAKLFDVARILHFSRWKKITLLI 192

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +S+   W  +V +E++          GIG  +  A +  +   +   
Sbjct: 193 VPSALPAILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVG 246

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
           ++    V  L D L   L + ++ W + ++
Sbjct: 247 IILFAVVGKLTDSLVRVLEKRLLRWQDTYK 276


>gi|157369979|ref|YP_001477968.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157321743|gb|ABV40840.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 264

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A V V  I              P  +V           L Q+ + ++ R L    I   
Sbjct: 19  VALVAVWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRALIGFSIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLALGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI R L E++RS+ LSG+Q F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 FMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADVSAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L++   
Sbjct: 245 LERVWLRWHPAYQLKQGEA 263



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 81/239 (33%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           R++          V  +++   W S   +           T      +     I+ +R +
Sbjct: 11  RLAPWALPVALVAVWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   I + +G   G        +    Q++   P     PLV+             
Sbjct: 71  IGFSIGGSIGLALGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G++ +  ++LPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239


>gi|296271876|ref|YP_003654507.1| binding-protein-dependent transporter inner membrane component
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096051|gb|ADG92001.1| binding-protein-dependent transport systems inner membrane
           component [Arcobacter nitrofigilis DSM 7299]
          Length = 341

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +  T   ++++++ S+L        +AKS  +  +L PILD MQ+ P   +L   V+
Sbjct: 126 WDASMTTLALVITSVLFSVLIGLPLGIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVM 185

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G  +  IFA     +  +       +  +P DL E SRSF  S  Q  +
Sbjct: 186 LFG---IGNVPGVIVTIIFA-----LPPLIRLTNLGIRQVPADLIEASRSFGASSSQMLF 237

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+   
Sbjct: 238 KVQLPVAMPTIMAGINQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDIGLA 290

Query: 242 LYAMLTMLGVIFLYDQL 258
               + ++ +  + D++
Sbjct: 291 AVGGIGIVILAVILDRI 307



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +  F V+  + +     + G  V    +   +        T+  V+  ++ + +I +P+
Sbjct: 92  VVIGFFVLLALQVSSKKMAFGTFV-SLAFIGFIGAWDASMTTLALVITSVLFSVLIGLPL 150

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +   ++P    +   PA V+   +V          N+   ++ I      +
Sbjct: 151 GIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVMLFGIG----NVPGVIVTIIFALPPL 206

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P D  E + SF  +  +    + LP   P  + G       + +  +++
Sbjct: 207 IRLTNLGIRQVPADLIEASRSFGASSSQMLFKVQLPVAMPTIMAGINQTLMLSLSMVVIA 266

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 267 SMIAVG-------GLGQMVLRGIGRLDIGLAAVGGIGIVILAVILDRI 307


>gi|293393333|ref|ZP_06637646.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291424153|gb|EFE97369.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 279

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 18/279 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           S +    +   R L + R  +      L +   ++    I    ++  + +    Q +  
Sbjct: 9   SSVGQTARAPARRLTLPRNLWLSAATLLVT---LAVWWGITALGLISPLFLPSPQQVLHQ 65

Query: 367 IVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           ++   + Q  +          ++ R+++ ++ A +I +PVGI +G    +   + P  ++
Sbjct: 66  LLTIASPQGFMDATLWQHLAASLGRILLALLAAVMIGVPVGIAMGLNDTVRGILDPLIEI 125

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V        +      LL+       +  + +AG  +        A 
Sbjct: 126 YRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLSTVAGVRSVAQVRLRAAR 181

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +     W+  R+++LP   P  +TG     G  W+  + +E+ +       T GLG  + 
Sbjct: 182 ALGANRWQVLRFVVLPNALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQ 235

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            + E  +   V+ G+ ++      L    R L   L  +
Sbjct: 236 SAGEFLATDVVIAGISVIAIIAFGLELGLRALQRRLTPW 274



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 105/249 (42%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   +  +G+I+ L     +  + + +    P      +L Q+ + +  R+L A++ +++
Sbjct: 41  VWWGITALGLISPLFLPSPQQVLHQLLTIASPQGFMDATLWQHLAASLGRILLALLAAVM 100

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      +  +  +L P+++I + +P L +L   V++F           E + I  
Sbjct: 101 IGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T S    + ++ +     +R+   + WQ   ++ +P ++P ++  + + + 
Sbjct: 153 IYLAIFAPVTLSTVAGVRSVAQVRLRAARALGANRWQVLRFVVLPNALPEILTGIRIGLG 212

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      ++  +  +  + F  +   + 
Sbjct: 213 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGLELGLRA 266

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 267 LQRRLTPWH 275


>gi|37519742|ref|NP_923119.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421]
 gi|35210733|dbj|BAC88114.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421]
          Length = 283

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 12/276 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG-VAIGIAWQSIG 365
           +      +   R L  IR   P+N   L     ++  L  +    V G V        + 
Sbjct: 12  ARSGEPFRPRPRPLLGIRTDVPKNAYLLAMTLSIAVPLAGWVLLSVGGRVDPLFVPTPLA 71

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                        ++     ++ RV +  ++++++ IP+G+ IG    +    +P   L 
Sbjct: 72  VWQAAVRLAQSGDLLNDSLASLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEPVLGLF 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA  F PL++  V             ++  G+ +Y    V       P D+ +V+ +
Sbjct: 132 RYMPAAAFIPLIILWVGL----DEPAKVAIIFIGSFFYNTLMVADAVKFVPADWLKVSYT 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                   +  +ILP   P  +         AWN  +V+E+ +        +GLG  I  
Sbjct: 188 LGAGRRDAFFRVILPATLPSVIDTLRINIATAWNFVVVAELVA------ANSGLGYRILV 241

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           S       E+ +G+L++    LA++      L+   
Sbjct: 242 SQRFLKTDEIFVGILVIGLIGLAIDALF-KWLFRLA 276



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +            L   +  +  R+    ++S L       L    + +  +  P
Sbjct: 67  PTPLAVWQAAVRLAQSGDLLNDSLASLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEP 126

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L + + +P   F+   +++     P        A +  IF    +  T  +  ++  +P
Sbjct: 127 VLGLFRYMPAAAFIPLIILWVGLDEP--------AKVAIIFIGSFFYNTLMVADAVKFVP 178

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  +VS +        F+ + +P ++P ++  + ++++  W FVV +E++         
Sbjct: 179 ADWLKVSYTLGAGRRDAFFRVILPATLPSVIDTLRINIATAWNFVVVAELVAANS----- 233

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
            G+G  I ++ +      I   +L +  +    D L   LFR  + W+
Sbjct: 234 -GLGYRILVSQRFLKTDEIFVGILVIGLIGLAIDALFKWLFRLAVPWA 280


>gi|163789949|ref|ZP_02184385.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7]
 gi|159874889|gb|EDP68957.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7]
          Length = 249

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 21/220 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVVVLIIIASI 399
           ++  V + + W+ + + +NH    + +  I L              +++R+++ I+I+ +
Sbjct: 12  LIGLVGLFLIWEGLYFFINHPVIPEPIETIRLFIHLFPSLIPHILSSLYRILMAILISFL 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIWIG        + P   L+   P   F P+ +        +       L+++ 
Sbjct: 72  IGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLLYGLGDASK----ISLVVWI 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + ++ +V  G S     + +V    H + W+ + Y++ P I P  ++G     G A  
Sbjct: 128 IVFQLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPAIIPQIISGLRVCIGIAIA 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           +   +E       +    GLG YI  +     + E+  G+
Sbjct: 188 SLFFAE------NYATKYGLGYYIMNAWSVIDYSEMFCGI 221



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  V +  I   L   I    +P  I  I        SL  +   +  R+L A++IS L
Sbjct: 12  LIGLVGLFLIWEGLYFFINHPVIPEPIETIRLFIHLFPSLIPHILSSLYRILMAILISFL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+    +L P++ ++  IP + FL   ++ +      K+       +F 
Sbjct: 72  IGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLLYGLGDASKISLVVWIIVF- 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+   +  I R   +V R    S WQ F YL  P  +P ++  + + + 
Sbjct: 131 -------QLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPAIIPQIISGLRVCIG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258
                +  +E            G+G YI  A    D   +   +     +  ++F    +
Sbjct: 184 IAIASLFFAE------NYATKYGLGYYIMNAWSVIDYSEMFCGILALCLLGFLLFKLIDI 237

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 238 LERLLVPW 245


>gi|331003007|ref|ZP_08326519.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413051|gb|EGG92426.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 262

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 105/254 (41%), Gaps = 21/254 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLSAMV 77
             + ++V  +++              I++   ++       +++  +   +  R+  A  
Sbjct: 20  FASLLIVWELVSRFTKAGLFLPPASLILEKFILSFKEPIGKYTMLTHIGVSLYRVGVAFG 79

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S +F          S+    +L PI + ++ IP L ++  ++++F           + +
Sbjct: 80  LSTVFGIALGVSMGYSKLAEAILKPIFEFIRPIPPLAWIPMSILWFGLG--------DKS 131

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F IF      +T + Y+   N+ + L   +R    S  Q F+ + +P S+P +   + 
Sbjct: 132 KFFIIFLGCFCFITVNTYEGTKNVDKTLIGAARMLGASERQVFFDIVLPSSVPYIFAGLQ 191

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++ GW  VV +EM+   +      G+G  I + +     + I+  ML +  V F+   
Sbjct: 192 IAVTAGWSAVVGAEMVHSNE------GVGWLIVMGMTYGKTVQIMVGMLAIGLVGFVLAT 245

Query: 258 L---LFRPMIVWSN 268
               L R +  W+N
Sbjct: 246 GMAKLERRLCAWNN 259



 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 10/204 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +I++         ++    ++++RV V   ++++  I +G+ +G+     + ++P  + +
Sbjct: 50  FILSFKEPIGKYTMLTHIGVSLYRVGVAFGLSTVFGIALGVSMGYSKLAEAILKPIFEFI 109

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P+ +        +       ++  G   +I  N   G           A  
Sbjct: 110 RPIPPLAWIPMSILWFGLGDKSK----FFIIFLGCFCFITVNTYEGTKNVDKTLIGAARM 165

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  + +  I+LP   PY   G   A    W+A + +E+           G+G  I  
Sbjct: 166 LGASERQVFFDIVLPSSVPYIFAGLQIAVTAGWSAVVGAEMVH------SNEGVGWLIVM 219

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
               G   ++++G+L +      L
Sbjct: 220 GMTYGKTVQIMVGMLAIGLVGFVL 243


>gi|325292270|ref|YP_004278134.1| glycine/betaine transport system; permease protein [Agrobacterium
           sp. H13-3]
 gi|325060123|gb|ADY63814.1| Glycine/betaine transport system; permease protein [Agrobacterium
           sp. H13-3]
          Length = 302

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 19/247 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
            S R+F     ++  ++++ I+++     + T        I  + +    L + A  T  
Sbjct: 57  SSERLFIQTPWIVTMLVILAIVHLAGRSFKITGG----TAISLLMIGAVGLWRDAMTTLS 112

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +  A +I+++       L  +S RL  ++ P+LD+MQ++P   +L   VV F     GK
Sbjct: 113 IVAIATLIAIVIGLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIFG---IGK 169

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V G     I+AI       +       +  + R++ E + +F  S  QK + + +P ++P
Sbjct: 170 VPGLIAVVIYAIP-----PVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALP 224

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++      VV + M+ VG       G+G  +  AI  Q           ++ 
Sbjct: 225 TIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVA 277

Query: 251 VIFLYDQ 257
           +  ++D+
Sbjct: 278 IAIMFDR 284



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +  +      +      G +++  G           + +      T+  V +  +IA +I
Sbjct: 65  TPWIVTMLVILAIVHLAGRSFKITGGTAISLLMIGAVGLWRDAMTTLSIVAIATLIAIVI 124

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +G    +   I P   ++   P+ V+   VV           +   + ++   
Sbjct: 125 GLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIFGIG----KVPGLIAVVIYA 180

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A +F  +  +    + LP   P  +TG       A   
Sbjct: 181 IPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMTGINQTIMMALAM 240

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +V+ +   G       GLG  + ++     F    L    +    +  +R
Sbjct: 241 VVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAIAIMFDR 284


>gi|300855011|ref|YP_003779995.1| putative nitrate/sulfonate/bicarbonate ABC transporter permease
           [Clostridium ljungdahlii DSM 13528]
 gi|300435126|gb|ADK14893.1| predicted ABC nitrate/sulfonate/bicarbonate family transporter,
           permease component [Clostridium ljungdahlii DSM 13528]
          Length = 271

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 11/211 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I     ++FRV     IA  + I +GI +G     +         +   P   + PL
Sbjct: 72  GQLINDLATSLFRVFKGYFIAVTLGISMGISMGISEKTNKFFTIVFNGIRQIPPLAWIPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +      +++  G  + IL N I G    P  + EVA  + I     ++ 
Sbjct: 132 FILWFGIGETSK----VIMIAMGAFFSILLNTINGIQNTPKQYLEVARLYKIKKVDLFKK 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P    G     G +W + + +E+ +       ++G+G  I ++        V+
Sbjct: 188 VYLPSAIPSIFVGLRLGAGASWMSVVAAEMIA------SSSGIGYRINDARSLMQSDVVI 241

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +G++++    + ++  L   +  + +R  RL
Sbjct: 242 VGIIVIGVVGVLMDTIL-RKIAHFASRWERL 271



 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 19  IFDLLAFVLVIGIIN-----ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           I + L F ++I +       + +          D++      +    L    + +  R+ 
Sbjct: 27  IINYLLFPILILVTWELISRLQIVSSILLPSIEDVIKSFISQIKSGQLINDLATSLFRVF 86

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               I++            S +       + + ++ IP L ++   +++F      KVI 
Sbjct: 87  KGYFIAVTLGISMGISMGISEKTNKFFTIVFNGIRQIPPLAWIPLFILWFGIGETSKVIM 146

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + A F+I          +    + N P+   EV+R +++     F  + +P ++P + 
Sbjct: 147 IAMGAFFSIL--------LNTINGIQNTPKQYLEVARLYKIKKVDLFKKVYLPSAIPSIF 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +     W  VVA+EMI          GIG  I  A        ++  ++ +  V  
Sbjct: 199 VGLRLGAGASWMSVVAAEMIASSS------GIGYRINDARSLMQSDVVIVGIIVIGVVGV 252

Query: 254 LYDQLLFRPMIVWSNKFR 271
           L D +L R +  +++++ 
Sbjct: 253 LMDTIL-RKIAHFASRWE 269


>gi|222082372|ref|YP_002541737.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727051|gb|ACM30140.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 295

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     RT   +    ++S+        L A+S  +  ++ PILD+MQ++P   +L   V
Sbjct: 96  MWDDTMRTVSMIFVCTILSIAIGIPIGILMARSNTVQRIINPILDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S  QK 
Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSNAQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GMFNGLAIVGIAVIFDRV 278



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     + ++ L   L            Q         +L I WF  
Sbjct: 16  RNLKKAIDDGFRGFTRAYGDTIESLFSPLQRFLIAADRFMTQTPWPIITLIILVIAWFAT 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +      +  I     + D +        T+  + V  I++  I IP+GI +   
Sbjct: 76  RSLKIVFSCLVILLLIGYFDMWDDTMR-------TVSMIFVCTILSIAIGIPIGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +        +   + ++      ++     G
Sbjct: 129 NTVQRIINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +V+ +     
Sbjct: 185 IRLVDKDVLEAADAFGTSNAQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGMFNGLAIVGIAVIFDR 277


>gi|312109994|ref|YP_003988310.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|311215095|gb|ADP73699.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 279

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 90/254 (35%), Gaps = 13/254 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
               + +   +  +       +   V+  +    +  +   +       +     +++FR
Sbjct: 28  RKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTHLKVSVFR 87

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
                ++ + I +  GI +GF       + P  Q+L   P     PL +    +   +  
Sbjct: 88  AAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSK- 146

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G         +VA   H + W+    +I+P   P  ++G
Sbjct: 147 ---VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSG 203

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              + G AW   +V+E+         T G+G  + ++ +  +   V +G+++        
Sbjct: 204 IRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLT 257

Query: 570 N---RFLWHPLYLY 580
           +   R L   L  +
Sbjct: 258 DSLVRVLEKRLLRW 271



 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 105/270 (38%), Gaps = 19/270 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQY 64
           +P F   R +     L  F+L I  +  +   + +T    P DIV           L  +
Sbjct: 21  IPAFGQFRKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTH 80

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R  +  ++      +       S +   VL P + ++++IP L      +++F 
Sbjct: 81  LKVSVFRAAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFG 140

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                KV+     A F ++         + +  +  +   L +V+R    S W+K   L 
Sbjct: 141 FGETSKVLLIAKGAFFPVYV--------NTFIGIRGVDAKLFDVARILHFSRWKKITLLI 192

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +S+   W  +V +E++          GIG  +  A +  +   +   
Sbjct: 193 VPSALPAILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVG 246

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
           ++    V  L D L   L + ++ W + ++
Sbjct: 247 IILFAVVGKLTDSLVRVLEKRLLRWQDTYK 276


>gi|310765617|gb|ADP10567.1| taurine transporter subunit [Erwinia sp. Ejp617]
          Length = 275

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 21/266 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-------AWQSIGYIVNHFTYQDVL 377
             +P       S   +  +L ++W      +   +        W  +  I +   + D  
Sbjct: 16  LRWPLPRQLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPTGFMD-A 74

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++ R+V+ ++ A  I +PVGI +G    +   + P  +L    P   + PL+
Sbjct: 75  TLWQHLAASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLM 134

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V        +      LL+       +  + +AG  +        A S   + W+   ++
Sbjct: 135 VIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFV 190

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ 
Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244

Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580
           G+ ++     AL    R L   L  +
Sbjct: 245 GITVIALIAFALELALRALQRRLTPW 270



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 103/254 (40%), Gaps = 22/254 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           L+  ++   +  + L        P+ +   +     P      +L Q+ + +  R++ A+
Sbjct: 32  LVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPTGFMDATLWQHLAASLTRIVIAL 91

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + ++        L   +  L  +L P++++ + +P L +L   V++F           E 
Sbjct: 92  LAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ET 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +  S    + +  +     +RS   S WQ  W++ +P ++P ++  +
Sbjct: 144 SKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGALPEILTGV 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F  +
Sbjct: 204 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIALIAFALE 257

Query: 257 ---QLLFRPMIVWS 267
              + L R +  W 
Sbjct: 258 LALRALQRRLTPWH 271


>gi|319780587|ref|YP_004140063.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166475|gb|ADV10013.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 286

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV   ++ A ++ +PVG+ IG          P  + L   P   + PLVV
Sbjct: 88  LLQHAIASLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPLVV 147

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +  L +++ M+      +  +  +G      +    A S   T  +  R++I
Sbjct: 148 IWFGIGEPSKILVITISMLA----PVALSTASGVRGVSQERINAARSLGATQRQVVRHVI 203

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   A G  W+  + +E+ +       T GLG  I  + +      VV+G
Sbjct: 204 LPSALPAILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMG 257

Query: 559 VLIMCCFVLALNRFLWH 575
           +L++      L   L  
Sbjct: 258 ILVIAAIAFVLEFTLRR 274



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 94/214 (43%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A  +  R+ +A+V ++L           S     +  P+L+ ++ IP L +L  
Sbjct: 86  ATLLQHAIASLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F    P K        I  I  S +  +  S    +  + ++    +RS   +  Q
Sbjct: 146 VVIWFGIGEPSK--------ILVITISMLAPVALSTASGVRGVSQERINAARSLGATQRQ 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + +++  GW  +VA+E++          G+G  I  A +    
Sbjct: 198 VVRHVILPSALPAILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             ++  +L +  + F+ +   + + R ++ W+ +
Sbjct: 252 DVVVMGILVIAAIAFVLEFTLRRIERVLVPWAGR 285


>gi|251799432|ref|YP_003014163.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547058|gb|ACT04077.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 265

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 28/269 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG---------------YIVNHFTYQDVL 377
           Q  +  R    L +    +V  V + + WQ +G                +    +     
Sbjct: 4   QTAAAGRTPGKLTLTGLALVFPVTLLVLWQVLGHYGYISELLFPTPYAIVEAGVSLASSG 63

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     I++ RV++   +   + +  GI +G        + P  Q++   P+    PL 
Sbjct: 64  DLWSNIQISVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLF 123

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +      LL+     + +  N   G     N   EVA     +  +    +
Sbjct: 124 ILWFGIGEESK----VLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRL 179

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   P  + GA  + G +W   +V+E+ +       T+G+G  ++++ +    P V +
Sbjct: 180 ILPAALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFV 233

Query: 558 GVLIMCCFVLALNRFLW---HPLYLYGTR 583
           G+ I     L  +  L      L  +  R
Sbjct: 234 GIFIFAVLGLFTDTLLALIERRLLRWKDR 262



 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 26/266 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQE---------TTVPRDIVDIVPITLDVHSLPQYASR 67
           P    L    LV  +  ++L  +              P  IV+          L      
Sbjct: 12  PGKLTLTGLALVFPVTLLVLWQVLGHYGYISELLFPTPYAIVEAGVSLASSGDLWSNIQI 71

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L    +      ++       RR   +L P + +++ IP L  +   +++F    
Sbjct: 72  SVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLFILWFGIG- 130

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E + +  I  S  + +  + +  + N+   L EV+R    S  ++   L +P 
Sbjct: 131 -------EESKVLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRLILPA 183

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++    +S+   W  +V +E+I          GIG  ++ A +  D   +   +  
Sbjct: 184 ALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFVGIFI 237

Query: 248 MLGVIFLYDQLL---FRPMIVWSNKF 270
              +    D LL    R ++ W +++
Sbjct: 238 FAVLGLFTDTLLALIERRLLRWKDRY 263


>gi|159905859|ref|YP_001549521.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
 gi|159887352|gb|ABX02289.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
          Length = 253

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 96/247 (38%), Gaps = 14/247 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386
           ++L  N  +  +  + W  +   +   +    +  +++      V  +     I    I+
Sbjct: 1   MKLLKNLTLPIIGILAWELLAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIIS 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + RV++   IA    IP+G+ +G+   I+  +    +LL   P   + PL ++       
Sbjct: 61  IKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAWVPLALAWFGIGES 120

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           + +     ++  G  + IL N I+G    P    E A +   +     + +++P   P  
Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGSTKDILKSVVVPASSPDI 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG     G AW   + +E+           GLG  I  +        VV  ++I+    
Sbjct: 177 LTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNVVVASMIIIGIIG 231

Query: 567 LALNRFL 573
           + L++ L
Sbjct: 232 IILDKGL 238



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+L    I+  F      L      +  +L   +++++ IP L +
Sbjct: 48  LGTGNLIENTIISIKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F                F IF    + +  +    +  +P  + E +++   S
Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + VP S P ++  + +     W  VVA+EM+   D      G+G  I  A   
Sbjct: 160 TKDILKSVVVPASSPDILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ +M+ +  +  + D+ L
Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238


>gi|330806952|ref|YP_004351414.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375060|gb|AEA66410.1| Taurine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 279

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 96/270 (35%), Gaps = 18/270 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQ 374
           +        P    +  S   +  +L ++W     G+   +   S   ++       T  
Sbjct: 15  SRRATNDSRPSLSTRWISGLTLIALLAVWWAVTASGLIEPLFLPSPSAVLQKGWLLATSG 74

Query: 375 DVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   +W     ++ R+ + ++ A +  +PVGI IG        + P  +     P   +
Sbjct: 75  YMDSTLWQHLAASLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAY 134

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V       L+      LL+       I      G           A S   T  + 
Sbjct: 135 LPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDRAKLRAAQSLGATRAQL 190

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R++I+P   P  +TG     G  W+  + +E+ +       T+GLG  +  + +     
Sbjct: 191 IRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTD 244

Query: 554 EVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            VVLG+L++     A+    R L   L  +
Sbjct: 245 VVVLGILVIALIAFAMEMGLRALQRKLVPW 274



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+   ++ ++L           +R    VL P+++  + IP L +L  
Sbjct: 78  STLWQHLAASLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  + R     ++S   +  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDRAKLRAAQSLGATRAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275


>gi|282864305|ref|ZP_06273361.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptomyces sp. ACTE]
 gi|282560792|gb|EFB66338.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptomyces sp. ACTE]
          Length = 879

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 88/233 (37%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L++  I  +L       +P  +       +D  +L   A  T   ++ A VI+++    
Sbjct: 48  PLLMAAIFAVLAFWLRGIIPAVLTFAGFALIDSLALWDEAMATLSLVIVAAVITIVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA++ ++   L P+LD+MQ++P   +L   V++F     G   G     +FA+   
Sbjct: 108 MGIWAARNSKVSATLRPVLDVMQTMPAFVYLIPGVMFFGV---GVTPGVIATIVFAMPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +       + +P ++P ++  +   +     
Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPKHTLTRVQLPLALPTIMAGINQVIMLALS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV   M   G            +  AI +  +     + + ++ +    D++
Sbjct: 220 MVVIGGMAGAGGLGEK-------VYAAITQLQVGLAAESGIAVVILAMYLDRM 265



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 6/181 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L    F V+     GI    + +    F   D L +      T+  V+V  +I  +I +
Sbjct: 49  LLMAAIFAVLAFWLRGIIPAVLTF--AGFALIDSLALWDEAMATLSLVIVAAVITIVIAV 106

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW      +S+ ++P   ++   PA V+    V           +   +        
Sbjct: 107 PMGIWAARNSKVSATLRPVLDVMQTMPAFVYLIPGVMFFGVGVTPGVIATIVF----AMP 162

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A +F  T       + LP   P  + G       A +  +
Sbjct: 163 PGVRMTELGIRQVDGELVEAAEAFGTTPKHTLTRVQLPLALPTIMAGINQVIMLALSMVV 222

Query: 523 V 523
           +
Sbjct: 223 I 223


>gi|325922412|ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
 gi|325547109|gb|EGD18194.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
          Length = 284

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 17/260 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLA---FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           L    P  +  R+  +    L    F   + I + L    +    P   +          
Sbjct: 12  LSTTAPARLRLRLPASSLGWLLPLSFFGALEIASALGWTPRYLLPPPSQILTTLADEAGR 71

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   + LR+L+   I      +       SR L  ++ P    ++++P L ++   
Sbjct: 72  GLASHIGASVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSLAWVPLL 131

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++            E   I  I     + +   +   L  + R L E+  S+ LS  + 
Sbjct: 132 LLWMGID--------EAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRL 183

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P +   +  S+S  W F+VA+E+I          G+G  ++   +     
Sbjct: 184 VRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRPD 237

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            ++ A++ +  +  L D +L
Sbjct: 238 IVIGAIVLLALLGKLSDGVL 257



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 15/262 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV-CGVAIGIAWQSI----GYIVNHF 371
            R    +    P           + ++L + +F  +    A+G   + +      I+   
Sbjct: 6   LRVARSLSTTAPARLRLRLPASSLGWLLPLSFFGALEIASALGWTPRYLLPPPSQILTTL 65

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +    +      ++ RV+    I + + + +G+ +G    +   I P  Q L A P+ 
Sbjct: 66  ADEAGRGLASHIGASVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSL 125

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL++  +             L+  G  + +   V++G         E+  S+ ++  
Sbjct: 126 AWVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKP 181

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R  R I+LP   P   TG  T+   AW   + +E+ +       T GLG  +++  E   
Sbjct: 182 RLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSR 235

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+  ++++       +  L
Sbjct: 236 PDIVIGAIVLLALLGKLSDGVL 257


>gi|182439684|ref|YP_001827403.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178468200|dbj|BAG22720.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 873

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           ++  GI+ ++   ++    P  ++  V   L D   L   A  T   +L A +++L+   
Sbjct: 49  LIFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A++SR +  +  P+LD MQ++P + +L   V++F     G V G     IFA+  
Sbjct: 107 PLGIWASRSRTVSAITRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +L E + +F  +       + +P ++P ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNILLRVQLPLALPTIMAGINQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 11/227 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362
           F  PL   V      L        +    + S     ++ +L      +  G+   IAW 
Sbjct: 2   FRLPLGEWVDSAVDWLQTHLAWLFDAISSVVSGMFDGIAAVLSAPAPLIFAGIVAVIAWW 61

Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             G      T+     +    +W   + T+  V+V  ++  +I +P+GIW      +S+ 
Sbjct: 62  LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSRTVSAI 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +P    +   PA V+    V       +   +   +          +     G      
Sbjct: 122 TRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 178 ELVEAAEAFGTTSRNILLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224


>gi|254470962|ref|ZP_05084365.1| taurine ABC transporter, permease protein [Pseudovibrio sp. JE062]
 gi|211960104|gb|EEA95301.1| taurine ABC transporter, permease protein [Pseudovibrio sp. JE062]
          Length = 289

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FRV+  +++ +++ IP+G+ +G          P  + +   P     PL++     
Sbjct: 96  GISVFRVLAGVLLGALVGIPLGLAMGLSSVARGLFDPIVEFMRPIPPLALIPLIILWFGI 155

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+   + + +     +G ++        A S   +  +   ++ILP   
Sbjct: 156 ----DETAKIFLLFLASLFIMTIAARSGVNSVKITKVHAAYSLGASRTQILFHVILPNAL 211

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG  TA G  W   + +E+ +         G+G+ I  +        VV+G+ ++ 
Sbjct: 212 PEIFTGLRTAMGVCWGTVVAAELVAADK------GVGSMIMIAKNFLQTDTVVIGIFVIG 265

Query: 564 CFVLALN 570
                + 
Sbjct: 266 LIGYTIE 272



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 99/260 (38%), Gaps = 22/260 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIV-----DIVPITLDVHSLPQYASRTTLRM 72
           +I  ++  +   GI + L           D        ++       +   +   +  R+
Sbjct: 43  SILTVVVLLAAWGIASALGMLESFYWPSVDATITRMSKLLSAGFRNVAFWDHIGISVFRV 102

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+ +++  L           S     +  PI++ M+ IP L  +   +++F         
Sbjct: 103 LAGVLLGALVGIPLGLAMGLSSVARGLFDPIVEFMRPIPPLALIPLIILWFGID------ 156

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A IF +F + ++ MT +    + ++       + S   S  Q  +++ +P ++P +
Sbjct: 157 --ETAKIFLLFLASLFIMTIAARSGVNSVKITKVHAAYSLGASRTQILFHVILPNALPEI 214

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +M   W  VVA+E++          G+GS I +A        ++  +  +  + 
Sbjct: 215 FTGLRTAMGVCWGTVVAAELVA------ADKGVGSMIMIAKNFLQTDTVVIGIFVIGLIG 268

Query: 253 FLYD---QLLFRPMIVWSNK 269
           +  +   + L R +I W  K
Sbjct: 269 YTIELGMRYLERWLIPWQGK 288


>gi|170724162|ref|YP_001751850.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762165|gb|ACA75481.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 528

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/556 (12%), Positives = 170/556 (30%), Gaps = 74/556 (13%)

Query: 18  NIFDLLAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +    +   ++I ++ +         ++      +V    +      L  +   +  R+ 
Sbjct: 26  SRILAVLLPILIALLWVAASQQHWMSEQILPAPSLVWQSAVEFGSGELWGHLWISLQRLW 85

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +    +       SR    +++P    +  IP L ++   +++F          
Sbjct: 86  WGLLVGIASGLLLGAWLGTSRNAQTLVLPTFVALAQIPTLAWIPLFMLFFGIG------- 138

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            EL  +  +  + V  +T      + +    L E + + RL        L +P ++P  +
Sbjct: 139 -ELLKLVVLVKAVVVPVTLHTLVGVRDTQPKLREAAAALRLPPHLLILRLLLPAALPAFL 197

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++++ GW  ++A E++   +      GIG  +    +   L  +L  +L +  V  
Sbjct: 198 TGVRLALATGWTSLLAVELLASSE------GIGYLMVWGRQLFMLDLVLLCILMIGLV-- 249

Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313
                                                        G      FS L   +
Sbjct: 250 ---------------------------------------------GGLMDRGFSTLEKRL 264

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               +         P     L     V+ ++          +   I    +  +   F  
Sbjct: 265 LYWPQPATGEHQRGPLPTGWLSLLLPVALLMLWQASSSFGWIDQNILTSPLDVVRTLFAG 324

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     +++ R +  +++     +  G+ +G   +      P    L       +
Sbjct: 325 LADGSLPEAMLLSLQRTLTGLVLGGGAGLLSGLLLGLSHNAERLFGPSLSALRQVALFAW 384

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+ +         N+     +     + +L     G ++      E   +  +  W+ 
Sbjct: 385 VPLLTAWFGLGEGAKNV----FVGLAAFFPLLIATQRGTASLSPQLGEAGRTLRLNQWQR 440

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R ++LPG  P    G   +   AW  +I +E            G+ + +  + +     
Sbjct: 441 LRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSD-----GGIASLMIGAQQLFRMD 495

Query: 554 EVVLGVLIMCCFVLAL 569
           +V+  +L++      L
Sbjct: 496 QVMAAMLLIGLVGALL 511



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T P D+V  +   L   SLP+    +  R L+ +V+      +   L   S     +  
Sbjct: 311 LTSPLDVVRTLFAGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLSGLLLGLSHNAERLFG 370

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  ++     +F      K +   LAA F         +  +  +   ++
Sbjct: 371 PSLSALRQVALFAWVPLLTAWFGLGEGAKNVFVGLAAFF--------PLLIATQRGTASL 422

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E  R+ RL+ WQ+   L +P + P +   + +S+   W   + +E  +  D    
Sbjct: 423 SPQLGEAGRTLRLNQWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSD---- 478

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GI S +  A +   +  ++ AML +  V  L   L  + + + + ++R
Sbjct: 479 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGNL-GQRLEMRATRWR 526



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 90/266 (33%), Gaps = 17/266 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV----VCGVAIGIAWQSIG 365
               K+    LG +R               +  ++ + W            I  A   + 
Sbjct: 3   GILSKRAWVRLGPLRGPSTAQGRSRILAVLLPILIALLWVAASQQHWMSEQILPAPSLVW 62

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                F   ++   +W   I++ R+   +++     + +G W+G   +  + + P    L
Sbjct: 63  QSAVEFGSGELWGHLW---ISLQRLWWGLLVGIASGLLLGAWLGTSRNAQTLVLPTFVAL 119

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           A  P   + PL +       L   + L   ++         + + G        +E A++
Sbjct: 120 AQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TLHTLVGVRDTQPKLREAAAA 175

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +        ++LP   P ++TG   A    W + +  E+ +       + G+G  +  
Sbjct: 176 LRLPPHLLILRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYLMVW 229

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR 571
             +      V+L +L++      ++R
Sbjct: 230 GRQLFMLDLVLLCILMIGLVGGLMDR 255


>gi|242238345|ref|YP_002986526.1| glycine betaine transporter membrane protein [Dickeya dadantii
           Ech703]
 gi|242130402|gb|ACS84704.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 392

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           L      + I+   L   Q  +    +  ++  I +        A  T   +L+A+   L
Sbjct: 138 LTGMPAPVAILLFSLLAWQIASAGMGVATLLALIVIGAIGAWSQAMITLSLVLTALFFCL 197

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         + S+R   V+ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 198 IIGLPLGVWLSHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 255 A-----LPPIVRLTILGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTL 309

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D++
Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVVLAIILDRI 360



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 85/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   +AWQ     +   T   ++ +  +G      IT+  V+  +   
Sbjct: 137 LLTGMPAPVAILLFSLLAWQIASAGMGVATLLALIVIGAIGAWSQAMITLSLVLTALFFC 196

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+G+W+      +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 197 LIIGLPLGVWLSHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 252

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E A SF  +  +    + LP   P  + G       A
Sbjct: 253 IFALPPIVRLTILGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTLMLA 312

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 313 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVVLAIILDRI 360


>gi|157372796|ref|YP_001480785.1| taurine transporter subunit [Serratia proteamaculans 568]
 gi|157324560|gb|ABV43657.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 279

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 17/267 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
              RF  P N     +   V  +    +    ++  + +    Q +  ++   + Q  + 
Sbjct: 18  PTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMD 77

Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                    ++ R++V ++ A II +PVGI +G    +   + P  ++    P   + PL
Sbjct: 78  ATLWQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPL 137

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V        +      LL+       +  + +AG  +        A +     W+  R+
Sbjct: 138 MVIWFGIGETSK----ILLIYLAIFAPVTLSAVAGVRSVAQVRVRAARALGANRWQLLRF 193

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+
Sbjct: 194 VVLPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVL 247

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580
            G+ ++      L    R L   L  +
Sbjct: 248 AGIGVIAIIAFGLELGLRALQRRLTPW 274



 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 105/254 (41%), Gaps = 22/254 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           L+   +  G+  + L        P+ ++  +     P      +L Q+ + +  R+L A+
Sbjct: 36  LVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMDATLWQHLAASLGRILVAL 95

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + +++           +  +  +L P+++I + +P L +L   V++F           E 
Sbjct: 96  LAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ET 147

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +T S    + ++ +     +R+   + WQ   ++ +P ++P ++  +
Sbjct: 148 SKILLIYLAIFAPVTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGI 207

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F  +
Sbjct: 208 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIAIIAFGLE 261

Query: 257 ---QLLFRPMIVWS 267
              + L R +  W 
Sbjct: 262 LGLRALQRRLTPWH 275


>gi|184200966|ref|YP_001855173.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
 gi|183581196|dbj|BAG29667.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
          Length = 293

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 93/230 (40%), Gaps = 10/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
               F +    G  +  A++         +  +   V+     +++R++  +++A+ I +
Sbjct: 62  AWWAFTYAAAGGSTMIAAFRPEQLPGAVGSLLERGVVVQDAVTSLWRLLGGLLLATAIGV 121

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ IG    +     P  Q L       + P+ V+            ++        W
Sbjct: 122 PLGLVIGSWQRVRWASAPVVQFLRMVSPLSWAPVAVALFGVGSAPVVFLVAA----AAVW 177

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N  AG +A       VA +   T +     ++ P I PY +TG   A G +W   +
Sbjct: 178 PITLNTAAGVAALDPAHLRVARTLGATPFERLLTVVFPSIRPYVMTGVRLALGISWVVLV 237

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +E+         +TGLG  I  + ++ ++ E+++ +L++    +AL+  
Sbjct: 238 PAEMLG------VSTGLGYEILNARDRLAYDEMLVVILVIGLLGIALDAL 281



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 84/242 (34%), Gaps = 17/242 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           F +L  V           G         P  +   V   L+   + Q A  +  R+L  +
Sbjct: 54  FGVLVTVAAWWAFTYAAAGGSTMIAAFRPEQLPGAVGSLLERGVVVQDAVTSLWRLLGGL 113

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++         +    +R+     P++  ++ +  L +    V  F             
Sbjct: 114 LLATAIGVPLGLVIGSWQRVRWASAPVVQFLRMVSPLSWAPVAVALFGVG--------SA 165

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +F +  + VW +T +    +  +      V+R+   + +++   +  P   P ++  +
Sbjct: 166 PVVFLVAAAAVWPITLNTAAGVAALDPAHLRVARTLGATPFERLLTVVFPSIRPYVMTGV 225

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  +V +EM+ V        G+G  I  A        +L  +L +  +    D
Sbjct: 226 RLALGISWVVLVPAEMLGVST------GLGYEILNARDRLAYDEMLVVILVIGLLGIALD 279

Query: 257 QL 258
            L
Sbjct: 280 AL 281


>gi|150395875|ref|YP_001326342.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150027390|gb|ABR59507.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 295

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     +T   +    V+S+        + ++S R   V+ P+LD+MQ++P   +L   V
Sbjct: 96  MWDDTMKTISMIFVCTVLSIAVGIPMGIIMSRSDRFQNVVNPVLDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S WQK 
Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 KNVQMPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 88/282 (31%), Gaps = 18/282 (6%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           R     + I     +F     + ++     L     H      +      +  +  I WF
Sbjct: 14  RLRQLKKIIDEGFRSFTRAYGDAIEAFFDPLQFFLIHAERFMTRTPWPIILILIALIAWF 73

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                      W+ +   +        L +      T+  + V  +++  + IP+GI + 
Sbjct: 74  A-------SRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAVGIPMGIIMS 126

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                 + + P   ++   P+ V+   VV  +        +   + ++      ++    
Sbjct: 127 RSDRFQNVVNPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTN 182

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G      D  E A +F  + W+  + + +P   P  + G       A    +++ +   
Sbjct: 183 LGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIG- 241

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                   GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|229587818|ref|YP_002869937.1| taurine ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359684|emb|CAY46532.1| taurine ABC transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 278

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 83/219 (37%), Gaps = 14/219 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G+++    Y D      LG  ++ R+ + +  A +  +PVGI IG        + P  + 
Sbjct: 66  GWLLATSGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEF 124

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + PL+V       L+      LL+       I      G           A 
Sbjct: 125 YRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQ 180

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   +  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  + 
Sbjct: 181 SLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 234

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            + +      VVLG+L++     A+    R L   L  +
Sbjct: 235 SAAQFLVTDVVVLGILVIALIAFAMEMGLRALQRKLVPW 273



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+   +  ++L           +R    VL P+++  + IP L +L  
Sbjct: 77  STLWQHLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEFYRPIPPLAYLPL 136

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   S  Q
Sbjct: 137 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASRAQ 188

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 189 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 242

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 243 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 274


>gi|27381358|ref|NP_772887.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354525|dbj|BAC51512.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 257

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 23/247 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------------IT 386
            S     F            +W + G  V+     + L ++  G              +T
Sbjct: 8   TSRQRVAFGLAFFVLFVALWSWATFGGHVSKTFLANPLTMVQEGFDLLTKQGFMFDIGMT 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++RVV    +A+II +P G+ +G    + + ++PF       PA+ F PL++       L
Sbjct: 68  IWRVVGGFALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGEL 127

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L++  G+ + ++  V     A   D  E A +   +     R ++LP   P  
Sbjct: 128 QK----LLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSAPEI 183

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                   G AW   IV+E+         ++G+G  I +S    +  +++ G++++    
Sbjct: 184 AEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIGLIG 237

Query: 567 LALNRFL 573
           L  +   
Sbjct: 238 LVSDFLF 244



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 92/257 (35%), Gaps = 19/257 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           F L  FVL + + +    G          P  +V      L           T  R++  
Sbjct: 15  FGLAFFVLFVALWSWATFGGHVSKTFLANPLTMVQEGFDLLTKQGFMFDIGMTIWRVVGG 74

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             ++ +    +  L    + +   L P +   + +P   F+   +++            E
Sbjct: 75  FALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG--------E 126

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L  +  IF   V+ +   +  ++    RDL E + +   S       + +P S P +   
Sbjct: 127 LQKLLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSAPEIAEI 186

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + + +   W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + 
Sbjct: 187 LRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVS 240

Query: 256 DQLLFRPMIVWSNKFRL 272
           D  LF+    W   ++L
Sbjct: 241 D-FLFKAFNAWLFPWKL 256


>gi|302548557|ref|ZP_07300899.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces hygroscopicus ATCC
           53653]
 gi|302466175|gb|EFL29268.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces himastatinicus ATCC
           53653]
          Length = 317

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R      +A +I +P+G+ IG    ++  + P  ++     A    P+ V  +   
Sbjct: 123 ASLARSFTGFGLAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIG 182

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++++   W IL N I+          ++A S  ++  R ++ +ILP   P
Sbjct: 183 ETSK----ISIVLYACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVP 238

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   A    + +E+           GLG  I  S    + P++  G+L +  
Sbjct: 239 TIFTGIRLAGANAILVLVAAEMVG------AKEGLGYLINSSQYNFAIPQMHAGILTISV 292

Query: 565 FVLALNRFL 573
             +A N+ L
Sbjct: 293 IGVAFNQLL 301



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 99/257 (38%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRM 72
           R    +  ++A + V  I   +    +    P  ++       L    L      +  R 
Sbjct: 69  RGLTKVAAIVALLAVWEITPRVGLVDRTFLPPFSEVARAWWELLADGQLADNTEASLARS 128

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +   ++++       L  + R +  +L P+L++ ++   L  L   V+           
Sbjct: 129 FTGFGLAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIG------ 182

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  +  +  W +  +   ++  +   L ++++S  LS  + F  + +P S+P +
Sbjct: 183 --ETSKISIVLYACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVPTI 240

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +     +VA+EM+   +      G+G  I  +     +  +   +LT+  + 
Sbjct: 241 FTGIRLAGANAILVLVAAEMVGAKE------GLGYLINSSQYNFAIPQMHAGILTISVIG 294

Query: 253 FLYDQLL---FRPMIVW 266
             ++QLL    R +  W
Sbjct: 295 VAFNQLLVTVERRLSSW 311


>gi|85860755|ref|YP_462957.1| sulfate transport system permease [Syntrophus aciditrophicus SB]
 gi|85723846|gb|ABC78789.1| sulfate transport system permease protein [Syntrophus
           aciditrophicus SB]
          Length = 280

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 21/232 (9%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+   +  ++    +   +  ++    I++ RV+   ++A  + IP+GI +G+   +   
Sbjct: 39  GVGQVAALFLQPTESLIAMGSLVTNVVISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRL 98

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQ 461
           +  F  L    P   + PLV++      L                N  L +  ++  G  
Sbjct: 99  LNGFLALFRPIPPLAWVPLVLAWFGVASLASMFGVEEGKAYLYLNNLKLSMIFIIFIGAF 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +L + I G     +   + A       W  +R I+LP   P  V G     G AW   
Sbjct: 159 YPVLTSAIHGVMGVRSTLLDSARVLGAGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCL 218

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +E+          +G+G  I  +        V+ G++ +      L+ F 
Sbjct: 219 VSAEMLPG-----SISGVGYLITHAYTLARTDIVIAGMISIGIVGAVLDLFF 265



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 17/223 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +      + + SL      + +R+L+  ++++        L      +  +L   L + +
Sbjct: 48  LQPTESLIAMGSLVTNVVISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRLLNGFLALFR 107

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAE------------LAAIFAIFTSQVWNMTFSMYQ 156
            IP L ++   + +F       + G E            L+ IF IF    + +  S   
Sbjct: 108 PIPPLAWVPLVLAWFGVASLASMFGVEEGKAYLYLNNLKLSMIFIIFIGAFYPVLTSAIH 167

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  +   L + +R      W  F  + +P + P +V  M + +   W  +V++EM+   
Sbjct: 168 GVMGVRSTLLDSARVLGAGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCLVSAEMLPG- 226

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                + G+G  I  A        ++  M+++  V  + D   
Sbjct: 227 ----SISGVGYLITHAYTLARTDIVIAGMISIGIVGAVLDLFF 265


>gi|293604869|ref|ZP_06687266.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292816697|gb|EFF75781.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 256

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 25/240 (10%)

Query: 346 IFWFCVVCGVAIGIAWQSI---------------GYIVNHFTYQDVLYVIWLGCITMFRV 390
           + W  V   VA  + W+ +                 +    +  D   + +    +  RV
Sbjct: 12  LIWVSVFSLVAFLLLWEGLCRAGAVDPIFLPAPSQVLARALSMSDQGTLFYNVLASTRRV 71

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V  + A I+ IP+GI +G      +   P    L   P+  + PL +            
Sbjct: 72  MVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPLSLLWFGITETQKYS 131

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++  G+    L  V+  +          A +     W+  R ++ PG  P  ++G 
Sbjct: 132 ----IVFMGSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLPQILSGM 187

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G +W   I +E+ +         GLG  I    E      VVLG++++   VL  +
Sbjct: 188 KIILGLSWTCVISAELVA------SKEGLGFMIMNGKEFFQTDTVVLGMVLISFTVLVTD 241



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 102/260 (39%), Gaps = 18/260 (6%)

Query: 12  SRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +R I+ ++F L+AF+L+  G+             P  ++       D  +L      +T 
Sbjct: 10  NRLIWVSVFSLVAFLLLWEGLCRAGAVDPIFLPAPSQVLARALSMSDQGTLFYNVLASTR 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++   + +++       L   S+    V  PI+  ++ +P + ++  ++++F      K
Sbjct: 70  RVMVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPLSLLWFGITETQK 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                      +F          + ++   I   L   +R+   + WQ    +  P  +P
Sbjct: 130 YS--------IVFMGSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLP 181

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M + +   W  V+++E++   +      G+G  I    +      ++  M+ +  
Sbjct: 182 QILSGMKIILGLSWTCVISAELVASKE------GLGFMIMNGKEFFQTDTVVLGMVLISF 235

Query: 251 VIFLYD---QLLFRPMIVWS 267
            + + D   +LL R ++ W 
Sbjct: 236 TVLVTDLCLRLLERWVLAWQ 255


>gi|116753834|ref|YP_842952.1| binding-protein-dependent transport systems inner membrane
           component [Methanosaeta thermophila PT]
 gi|116665285|gb|ABK14312.1| binding-protein-dependent transport systems inner membrane
           component [Methanosaeta thermophila PT]
          Length = 239

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 10/228 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W      V   +   S   +VN F             +++    + I    II +P+G+
Sbjct: 4   VWQISAMLVNDSLVLPSFLDVVNAFGSSWRDIFFQDLPVSLLHFFLGIFAGMIIAMPLGM 63

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+   +   I P  +++   P   + P  +      H +       ++  G  + IL 
Sbjct: 64  GMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHES----AGFIVFIGAVFPILI 119

Query: 467 NVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           N   G    P  + E A     T      RY+ LP   P    G   A G AW   + +E
Sbjct: 120 NTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIAWMCLVAAE 179

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       + T+GLG  I           V+L ++++    L +++  
Sbjct: 180 MFG-----VSTSGLGYRIWSYYYLHKMEHVLLYMIVLGMLGLFIDKAF 222



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 14/210 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L     +   ++           SR L  ++ PI+++++ IP L ++ F +V+F    
Sbjct: 43  SLLHFFLGIFAGMIIAMPLGMGMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGL-- 100

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVP 186
                    +A F +F   V+ +  + Y    N+PR   E +     +       Y+ +P
Sbjct: 101 ------THESAGFIVFIGAVFPILINTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALP 154

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +++P +   + ++M   W  +VA+EM  V  +     G+G  I        +  +L  M+
Sbjct: 155 YALPSIAAGIRIAMGIAWMCLVAAEMFGVSTS-----GLGYRIWSYYYLHKMEHVLLYMI 209

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
            +  +    D+     +     K+R+  T 
Sbjct: 210 VLGMLGLFIDKAFRSIIEDRLLKWRVGLTQ 239


>gi|238759169|ref|ZP_04620337.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia aldovae ATCC 35236]
 gi|238702585|gb|EEP95134.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia aldovae ATCC 35236]
          Length = 347

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 92  LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 151

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 152 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 208

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 209 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 263

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 264 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 54  PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 99

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 100 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 152

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 153 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 208

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 209 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 268

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 269 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314


>gi|327439348|dbj|BAK15713.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 272

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W                  +V          +      +  RV+    +  +I +
Sbjct: 38  FILLVWQIASVFSEPMFLPSPYLTLVGAIEIASDGTLFLYMGYSFLRVLAGWTLGLLIAV 97

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P G+ IG    + +  +P    +   P   F  L +        +       L+++ T +
Sbjct: 98  PFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFMLWFGIGEQSK----VFLIVYATFF 153

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N + G  +  ND    A S   + ++   Y+++P   PY  TGA  A G ++ A +
Sbjct: 154 VITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAKLAMGSSFMAIV 213

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+ +         G+G  I  +        + +G++++      ++R  
Sbjct: 214 GAEMVA------ANEGIGFMIWNARLYFKTDWIFVGLVVLGLMGFIMDRIF 258



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 103/242 (42%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +   L  +LV  I ++    +   +    +V  + I  D  +L  Y   + LR+L+   
Sbjct: 32  GMIGWLFILLVWQIASVFSEPMFLPSPYLTLVGAIEIASD-GTLFLYMGYSFLRVLAGWT 90

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + LL    +  L   ++ +  +  P+++ ++ IP L F+T  +++F           E +
Sbjct: 91  LGLLIAVPFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFMLWFGIG--------EQS 142

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F I  +  + +T +    + +I  D    ++S   S +Q   Y+ +P ++P +     
Sbjct: 143 KVFLIVYATFFVITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAK 202

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++M   +  +V +EM+   +      GIG  I  A        I   ++ +  + F+ D+
Sbjct: 203 LAMGSSFMAIVGAEMVAANE------GIGFMIWNARLYFKTDWIFVGLVVLGLMGFIMDR 256

Query: 258 LL 259
           + 
Sbjct: 257 IF 258


>gi|332529142|ref|ZP_08405106.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332041365|gb|EGI77727.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 298

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 95/236 (40%), Gaps = 18/236 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
                  P DI   + +      L  + + ++ R+ +   I  +   V  T+   SRR  
Sbjct: 71  NAHLLPAPSDIARTL-LAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGE 129

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +L P    +++IP L ++   +++            E + +  I     + +   +   
Sbjct: 130 ALLDPTFQALRAIPSLAWVPLLLLWLGID--------EASKVVLIAIGGFFPVYMGVASG 181

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
             ++ R L EV+R +RL   +    + +P ++P ++  +   +S  W F+VA+E+I    
Sbjct: 182 FRDVDRKLVEVARMYRLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIA--- 238

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
                 G+G  +    +      +L A++ +  +  + D  L    R ++ W + +
Sbjct: 239 ---ATKGLGYLLTDGREMGRPDIVLAAIVLLALLGKVTDTALAWLERRLLHWRDSY 291



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I           +      +  RV     I +++ I +G  +G      + + P  Q L 
Sbjct: 81  IARTLLAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGEALLDPTFQALR 140

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P+  + PL++  +     +      +L+  G  + +   V +G         EVA  +
Sbjct: 141 AIPSLAWVPLLLLWLGIDEASK----VVLIAIGGFFPVYMGVASGFRDVDRKLVEVARMY 196

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +      R ++LP   P  +TG       AW   + +E+ +       T GLG  + + 
Sbjct: 197 RLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIA------ATKGLGYLLTDG 250

Query: 547 TEKG 550
            E G
Sbjct: 251 REMG 254


>gi|134045438|ref|YP_001096924.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
 gi|132663063|gb|ABO34709.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
          Length = 253

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 9/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +           +I    +++ RV++   IA    IP+G+ +G+   I+  +    +L 
Sbjct: 40  LLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELF 99

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++       + +     ++  G  + IL N I+G  + P    E A +
Sbjct: 100 RPIPPLAWVPLALAWFGIGESSMH----FIIFIGAFFPILINTISGVKSVPVIMVEAAKT 155

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +     + +++P   P  +TG     G AW   + +E+           GLG  I  
Sbjct: 156 LGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMY 210

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        VV  ++I+    + L++ L
Sbjct: 211 AYSLSKMNVVVASMIIIGIIGIILDKGL 238



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+L    I+  F      L      +  +L   +++ + IP L +
Sbjct: 48  LGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELFRPIPPLAW 107

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F                F IF    + +  +    + ++P  + E +++   S
Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGS 159

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + VP S P ++  + +     W  VVA+EM+   D      G+G  I  A   
Sbjct: 160 TKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++ +M+ +  +  + D+ L
Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238


>gi|316934163|ref|YP_004109145.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315601877|gb|ADU44412.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 295

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 98/289 (33%), Gaps = 25/289 (8%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
            S  +  S  +     + RT             +L +  R + +  I    ++    + +
Sbjct: 1   MSLQSTVSSSAMGAPSMTRTSAAPARGGSRPPGKLAARLRATALALIVPLGLLLAWDLMV 60

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI---------------TMFRVVVLIIIASIIWIPV 404
            W     +        +++    G I               ++ RV     +A++I IP+
Sbjct: 61  RWTGTRLVPPPSGIATMMWDFAFGGIYDDAYSASLPIHFWKSVQRVYGGFFLAALIGIPL 120

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG  P + + + P   LL   P   + PL +        +       L+  G  + I
Sbjct: 121 GLMIGRIPLLRALLDPTLALLRPIPVTAWLPLSMIFFGLGPKS----AVFLVFLGAFYPI 176

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L N + G  +      E A      G + +R ++LP   P    G       AW   +V 
Sbjct: 177 LLNTVFGVKSVDVRLFEAAGMLGCNGPQLFRSVVLPAALPSIFNGLRLGASFAWILIVVG 236

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           E+           GLGA I +         V+ G++I+       +R L
Sbjct: 237 EM------TGVPEGLGAVIMDGRTLSRTDLVITGMIIIGITGFLSDRIL 279



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SLP +  ++  R+     ++ L       +  +   L  +L P L +++ IP+  +L  
Sbjct: 93  ASLPIHFWKSVQRVYGGFFLAALIGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL 152

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F             +A+F +F    + +  +    + ++   L E +     +G Q
Sbjct: 153 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCNGPQ 204

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +  S  W  +V  EM  V +      G+G+ I         
Sbjct: 205 LFRSVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 258

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M+ +    FL D++L       + WS 
Sbjct: 259 DLVITGMIIIGITGFLSDRILVMLSNYFLRWSP 291


>gi|261402938|ref|YP_003247162.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus vulcanius M7]
 gi|261369931|gb|ACX72680.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus vulcanius M7]
          Length = 258

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 18/223 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            I  +        +I    I++ RV+    +AS + IP+GI +G    +++      +LL
Sbjct: 45  LIHPNQGILGTGNLIENTLISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELL 104

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL ++      ++    + +   F     IL N I+G  + P    E A +
Sbjct: 105 RPIPPLAWVPLSLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKSVPTPLIEAALT 160

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
               G      +++P   P  +TG     G AW   + +E+           GLG  I  
Sbjct: 161 LGAKGRDILLKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMY 215

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579
           +        V+  ++I+    L L+R         F+W  +  
Sbjct: 216 AYSISRMDVVIACMIIIGIIGLILDRGLRYIEDKYFVWRKMMK 258



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   +L +    +  R+LS   ++         L    + +  +   I+++++ IP L +
Sbjct: 53  LGTGNLIENTLISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELLRPIPPLAW 112

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  ++ +F           E++ IF IF    + +  +    + ++P  L E + +    
Sbjct: 113 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAK 164

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G      + +P S P ++  + +     W  VVA+EM+   +      G+G  I  A   
Sbjct: 165 GRDILLKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSI 219

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  ++  M+ +  +  + D+ L
Sbjct: 220 SRMDVVIACMIIIGIIGLILDRGL 243


>gi|294792570|ref|ZP_06757717.1| ABC transporter, permease protein [Veillonella sp. 6_1_27]
 gi|294456469|gb|EFG24832.1| ABC transporter, permease protein [Veillonella sp. 6_1_27]
          Length = 250

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++  L       + G    +       ++          +      ++ R  +  II+ +
Sbjct: 12  IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDVADSLVRFFIGYIISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 94/237 (39%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  +I  L          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDVADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|39935744|ref|NP_948020.1| putative ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|192291331|ref|YP_001991936.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Rhodopseudomonas palustris TIE-1]
 gi|39649597|emb|CAE28119.1| putative permease protein, subunit of ABC transporter
           [Rhodopseudomonas palustris CGA009]
 gi|192285080|gb|ACF01461.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 294

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 25/260 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--- 385
             F +L +  R + +  I    ++    + + W     +        +++    G I   
Sbjct: 29  RQFAKLTARLRTTALALIVPLGLLLVWDLMVRWTGTRLVPPPSGVATMMWDFAFGGIYDD 88

Query: 386 ------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                       ++ RV     +A+++ IP+G+ IG  P + + + P   LL   P   +
Sbjct: 89  AYSGSLPIHFWKSVQRVYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAW 148

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +       L+  G  + IL N + G  +      E A     +G + 
Sbjct: 149 LPLSMIFFGLGPKS----AVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQL 204

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R ++LP   P    G       AW   +V E+           GLGA I +        
Sbjct: 205 FRSVVLPAALPSIFNGLRLGASFAWILIVVGEM------TGVPEGLGAVIMDGRTLSRTD 258

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+ G++I+       +R L
Sbjct: 259 LVITGMIIIGITGFLSDRIL 278



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SLP +  ++  R+     ++ L       +  +   L  +L P L +++ IP+  +L  
Sbjct: 92  GSLPIHFWKSVQRVYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F             +A+F +F    + +  +    + ++   L E +     SG Q
Sbjct: 152 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQ 203

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +  S  W  +V  EM  V +      G+G+ I         
Sbjct: 204 LFRSVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 257

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M+ +    FL D++L       + WS 
Sbjct: 258 DLVITGMIIIGITGFLSDRILVSLSNYFLRWSP 290


>gi|317049234|ref|YP_004116882.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316950851|gb|ADU70326.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 371

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           LL     + ++   L   Q  +    I  ++ + L         A  T   +L+A++  +
Sbjct: 116 LLGMPAPVALVVFALIAWQIASPAMGIATLISLVLIGAIGAWSQAMVTLALVLTALLFCI 175

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 176 IIGLPLGIWLARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 232

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E S SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 233 A-----LPPIVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 287

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 288 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 338



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ     +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 115 LLLGMPAPVALVVFALIAWQIASPAMGIATLISLVLIGAIGAWSQAMVTLALVLTALLFC 174

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 175 IIIGLPLGIWLARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 230

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G    P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 231 IFALPPIVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 290

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 291 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 338


>gi|330981307|gb|EGH79410.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 282

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 22/272 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   ++I ++ +++        +   P +IV  +   L   +L ++ S +
Sbjct: 26  QRYRAPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS   I      V+A     SR     L P    ++SIP         + ++ L  
Sbjct: 85  LLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPS--------LAWVALLL 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +   E + I  I     + +  +   ++  I R L EV + + LS ++    + +P +
Sbjct: 137 LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAA 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL   +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +
Sbjct: 197 LPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIIL 250

Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
             +  L D LL    +  + W + F  +   G
Sbjct: 251 ATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    I + + +    W+G      + ++P    L + P+  +  L++  +   
Sbjct: 83  ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVALLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  +    +W   + +E+ +       T GLG  +++  E      V+  ++I+  
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIILAT 252

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 253 LGKLSDGLL 261


>gi|238796648|ref|ZP_04640154.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia mollaretii ATCC 43969]
 gi|238719379|gb|EEQ11189.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia mollaretii ATCC 43969]
          Length = 365

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 110 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 169

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 170 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 226

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 227 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 281

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 282 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 332



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 72  PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 117

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 118 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 170

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 171 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 226

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 227 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 286

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 287 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 332


>gi|254360698|ref|ZP_04976847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261491837|ref|ZP_05988416.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494692|ref|ZP_05991172.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153091238|gb|EDN73243.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261309657|gb|EEY10880.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312492|gb|EEY13616.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 247

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ V ++ A +I +P+G+ +GF  H+     P  QLL       + P+
Sbjct: 52  GEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRMISPLSWMPI 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  +    L     +  L+ F T W ++ +  +G  +    + ++      T       
Sbjct: 112 IVMLLGVGDL----PIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSATRKELLCK 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P I  + +TG   A G AW   +  E+           GLG +I ++ ++ ++ E++
Sbjct: 168 IVVPAITGHVLTGLRVAVGIAWVVLVPCEMLG------VNQGLGYFILDTRDRLAYSELM 221

Query: 557 LGVLIMCCFVLALNRFL 573
             ++I+     AL+  +
Sbjct: 222 AVIIIIGLIGWALDSLI 238



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 79/221 (35%), Gaps = 14/221 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +     P    +     +    +  +   +  R+   ++ +L+       L   S+ L M
Sbjct: 32  MASMLAPAKTWESFTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEM 91

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +  P   +++ I  L ++   V+             +L   F +  + VW++  S    +
Sbjct: 92  LCTPSFQLLRMISPLSWMPIIVMLLGVG--------DLPIYFLLAFATVWSLIISTTSGV 143

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I     ++ R    +  +    + VP     ++  + +++   W  +V  EM+ V   
Sbjct: 144 KSIDPQWLQLGRVMSATRKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQ- 202

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G +I           ++  ++ +  + +  D L+
Sbjct: 203 -----GLGYFILDTRDRLAYSELMAVIIIIGLIGWALDSLI 238


>gi|238755713|ref|ZP_04617047.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia ruckeri ATCC 29473]
 gi|238706080|gb|EEP98463.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +T+   +  +V  + +        A  T   +L+++   +
Sbjct: 105 LLGMPAPIAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 164

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 165 LIGLPLGIWLARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 221

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 222 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 276

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 277 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 327



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 67  PLDSWV------THGIDWVVLHFRPVFQGIRVPVDFILSGFQHMLLGMPAPI-------- 112

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  +V           +    +T+  V+  +    +
Sbjct: 113 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 165

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 166 IGLPLGIWLARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 221

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 222 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 281

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 282 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 327


>gi|70733776|ref|YP_257416.1| taurine ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348075|gb|AAY95681.1| taurine ABC transporter, permease protein [Pseudomonas fluorescens
           Pf-5]
          Length = 279

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +  A +  IPVGI IG        + P  +     P   + PL+V     
Sbjct: 85  AASLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      LL+       I      G           A S   T  +  R++ILP   
Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 201 PDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIA 254

Query: 564 CFVLALN---RFLWHPLYLY 580
               A+    R L   L  +
Sbjct: 255 LIAFAMEMGLRALQRKLVPW 274



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A+  ++L           +R    VL P+++  + IP L +L  
Sbjct: 78  STLWQHLAASLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   +  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275


>gi|312960707|ref|ZP_07775212.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311284365|gb|EFQ62941.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 273

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 110/280 (39%), Gaps = 23/280 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLD 57
           L ++ P    R  +P     L    +I ++  +   +      +   P +I   +   L 
Sbjct: 8   LPHVTPTAPHRSAWPRRLKGLVLPALILLVLEIAVRVGWLPSYQMPAPSEIAVTLS-ELA 66

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L ++ S +  R+L    I      V+A     SR     L P    ++SIP L ++ 
Sbjct: 67  EGALWKHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVP 126

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++            E + I  I     + +  +   ++ +I R L EV + +  S  
Sbjct: 127 LLLLWLGID--------ETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRR 178

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P ++PGL   +   +S  W F+VA+E+I          G+G  ++   +   
Sbjct: 179 RLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRETSR 232

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLER 274
              +L A++ +  +  + D L   L +  + W + F  + 
Sbjct: 233 PDIVLAAIIVLALLGKVTDGLLAALEKRCLAWRDTFTGQE 272



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 96/264 (36%), Gaps = 16/264 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           +   +  +    P    +    +R+  ++      +V  +A+ + W     +        
Sbjct: 1   MSSKVQALPHVTPTAPHRSAWPRRLKGLVLPALILLVLEIAVRVGWLPSYQMPAPSEIAV 60

Query: 376 VLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            L  +  G +      ++ RV++   I + + +    W+G      + ++P    L + P
Sbjct: 61  TLSELAEGALWKHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIP 120

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +  + PL++  +     +      +L+  G  + +  N +A          EV   +  +
Sbjct: 121 SLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFS 176

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             R  R I+LP   P   TG  +    AW   + +E+ +       T GLG  +++  E 
Sbjct: 177 RRRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRET 230

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                V+  ++++       +  L
Sbjct: 231 SRPDIVLAAIIVLALLGKVTDGLL 254


>gi|283784185|ref|YP_003364050.1| taurine ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282947639|emb|CBG87194.1| taurine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 277

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 21/277 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI-------GIAWQSIGY 366
            K  +    +++ +P +     S   ++ ++ ++W      +         G   Q +  
Sbjct: 7   DKPRQRALKLKWRWPLSRQLTLSLGTLAVIVSVWWAVATLQLVSPLFLPPPGQVLQKLWV 66

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I     + D   +      ++ R+V+ ++ A+I+ IPVGI +G  P I   + P  +L  
Sbjct: 67  IAGPQGFMD-ATLWQHLAASLTRIVLALLAAAIVGIPVGIAMGLSPAIRGVLDPIIELYR 125

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   + PL+V        +      LL+       +  + +AG  +        A S 
Sbjct: 126 PVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSL 181

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +   ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  +
Sbjct: 182 GASRSQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 235

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            E  +   V+ G+ ++      L    R L   L  +
Sbjct: 236 GEFLATDVVLAGIAVIAVIAFMLELGLRALQRRLTPW 272



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 20/248 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 35  VIVSVWWAVATLQLVSPLFLPPPGQVLQKLWVIAGPQGFMDATLWQHLAASLTRIVLALL 94

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            + +           S  +  VL PI+++ + +P L +L   V++F           E +
Sbjct: 95  AAAIVGIPVGIAMGLSPAIRGVLDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 146

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 147 KILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRSQVLWFVILPGALPEILTGLR 206

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +  GW  +VA+E+I          G+G  +  A  E     ++ A + ++ VI    +
Sbjct: 207 IGLGVGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFMLE 259

Query: 258 LLFRPMIV 265
           L  R +  
Sbjct: 260 LGLRALQR 267


>gi|222055625|ref|YP_002537987.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564914|gb|ACM20886.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 300

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V      ++  ++     ++  +V   ++A I  +P+G+ IG+R  +   + PF ++L  
Sbjct: 93  VLELFVAELPDMLKGLVNSLILLVSGYLLALITGVPLGLLIGWRGRLFRAVNPFTKVLGP 152

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V+ P  ++ +  +          ++  G  W I  N + G    P    + A   +
Sbjct: 153 IPPIVYIPYAIALLPSFRA----ASIFVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLN 208

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +        +ILPG  P   TGA  A   +      +E+          +G+G Y+    
Sbjct: 209 LRETTLLFRVILPGAMPSICTGATLALVFSLVLLTAAELIG------ANSGIGWYVKNFA 262

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
           +   +  V++G++ +   V  +
Sbjct: 263 DFADYQRVIVGIIFISLVVTGI 284



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 89/236 (37%), Gaps = 18/236 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYA---SRTTLRMLSAM 76
           D+ + + +  ++  L+ G              P+  L V  LP        + + ++S  
Sbjct: 60  DVASIIYLFLLLWFLVTGKSALLDKMLFPQPEPVLELFVAELPDMLKGLVNSLILLVSGY 119

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++L+       L     RL   + P   ++  IP + ++ + +                
Sbjct: 120 LLALITGVPLGLLIGWRGRLFRAVNPFTKVLGPIPPIVYIPYAIALL--------PSFRA 171

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+IF IF    W +  +    + NIP+ L + +R   L      + + +P +MP +    
Sbjct: 172 ASIFVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLNLRETTLLFRVILPGAMPSICTGA 231

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            +++      + A+E+I          GIG Y+       D   ++  ++ +  V+
Sbjct: 232 TLALVFSLVLLTAAELIGANS------GIGWYVKNFADFADYQRVIVGIIFISLVV 281


>gi|264676297|ref|YP_003276203.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni
           CNB-2]
 gi|262206809|gb|ACY30907.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni CNB-2]
          Length = 285

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 97/267 (36%), Gaps = 10/267 (3%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P +       R + ++    P   L L       ++L   +  V   VA       +  
Sbjct: 15  EPAAAPASHGPRKMKLLHPVEPRVRLFLGVAFFALFLLFWTFLTVAGIVAPHFLASPLQA 74

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   +        +    +T++RV+   ++A++I +P+GI +G    I +  +PF     
Sbjct: 75  LKAAWKLFTEFGFLNDVGMTVWRVMGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFAR 134

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             PA+ F PL++  V             ++  G  + +   V+        D  E A + 
Sbjct: 135 YLPASAFIPLLIMWVGIGEAQKLS----IIFIGCFFQLTLMVMMIVGNARRDLVEAAYTL 190

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T     R ++LPG  P          G  W   +V+E+          +G+G  I +S
Sbjct: 191 GSTDSSVIRRVLLPGAAPEIAEALRQVLGLGWTYVVVAELIG------AASGIGHMIMDS 244

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +   ++ G++I+    L  +   
Sbjct: 245 QALMATDNIIAGIVIIGLVGLTSDLLF 271



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 80/247 (32%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+F  +     F+L    + +  +        P   +                  T  R+
Sbjct: 39  RLFLGVAFFALFLLFWTFLTVAGIVAPHFLASPLQALKAAWKLFTEFGFLNDVGMTVWRV 98

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   V++ +            + +  +  P +   + +P   F+   +++       K+ 
Sbjct: 99  MGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFARYLPASAFIPLLIMWVGIGEAQKLS 158

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                    IF    + +T  +   + N  RDL E + +   +       + +P + P +
Sbjct: 159 --------IIFIGCFFQLTLMVMMIVGNARRDLVEAAYTLGSTDSSVIRRVLLPGAAPEI 210

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +   +  GW +VV +E+I          GIG  I  +        I+  ++ +  V 
Sbjct: 211 AEALRQVLGLGWTYVVVAELIGAAS------GIGHMIMDSQALMATDNIIAGIVIIGLVG 264

Query: 253 FLYDQLL 259
              D L 
Sbjct: 265 LTSDLLF 271


>gi|229826018|ref|ZP_04452087.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC
           49176]
 gi|229789760|gb|EEP25874.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC
           49176]
          Length = 266

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 78/209 (37%), Gaps = 10/209 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++ +         +     I+++RV+V  +IA++  + +G+++G+     +  +P  + 
Sbjct: 52  AFLTSFVVPVGKYTMQVHIAISLYRVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEF 111

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   + P+ +        +       ++  G+  +I  N   G           A 
Sbjct: 112 VRPIPPLAWIPMSILWFGIGDESKW----FIIFLGSFTFITVNTYDGTKNVDKTLMGAAR 167

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
                  + +  ++LP   PY   G   A    W+A + +E+           G+G  I 
Sbjct: 168 MLGANERQVFTRVVLPSAVPYIFAGLQIAITAGWSAVVAAEMIRSDE------GVGWLIV 221

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                G+  ++++G++ +      L   +
Sbjct: 222 MGMSTGNTIQIMVGIVAIGAIGFILATLM 250



 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 103/252 (40%), Gaps = 21/252 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----HSLPQYASRTTLRMLSAMV 77
           ++ F++V  ++               I+     +  V    +++  + + +  R+L A +
Sbjct: 23  VIGFLVVWELVARFTGAKMFLPPASVIIQAFLTSFVVPVGKYTMQVHIAISLYRVLVAFL 82

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+ +           SR    +  P+ + ++ IP L ++  ++++F      K       
Sbjct: 83  IATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPMSILWFGIGDESKW------ 136

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F IF      +T + Y    N+ + L   +R    +  Q F  + +P ++P +   + 
Sbjct: 137 --FIIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAVPYIFAGLQ 194

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++ GW  VVA+EMI          G+G  I + +   + + I+  ++ +  + F+   
Sbjct: 195 IAITAGWSAVVAAEMI------RSDEGVGWLIVMGMSTGNTIQIMVGIVAIGAIGFILAT 248

Query: 258 L---LFRPMIVW 266
           L   L R +  W
Sbjct: 249 LMSALERRLCRW 260


>gi|282849631|ref|ZP_06259015.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|282580568|gb|EFB85967.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 250

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+  L       + G    +       ++          +      ++ R  +  II+ +
Sbjct: 12  VAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 94/237 (39%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  ++  +          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FVAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|237730337|ref|ZP_04560818.1| taurine transporter subunit [Citrobacter sp. 30_2]
 gi|226905876|gb|EEH91794.1| taurine transporter subunit [Citrobacter sp. 30_2]
          Length = 276

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 104/273 (38%), Gaps = 19/273 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFT 372
            R   V+ + +P +     S   ++ +L ++W      +   +      Q +  ++    
Sbjct: 9   PRRQRVLNWRWPFSRQITLSLGTLAVILAVWWTVAALQLISPLFLPPPGQVLQKLIVIAG 68

Query: 373 YQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            Q  +          ++ R+V+ ++ A ++ +PVGI +G  P +   + P  +L    P 
Sbjct: 69  PQGFMDATLWQHLAASLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPP 128

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL+V        +      LL+       +  + +AG  +        A S   + 
Sbjct: 129 LAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASR 184

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +   ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  
Sbjct: 185 AQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFL 238

Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +   V+ G+ ++      L    R L   L  +
Sbjct: 239 ATDVVLAGIAVIAVIAFILELGLRALQRRLTPW 271



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 101/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 34  VILAVWWTVAALQLISPLFLPPPGQVLQKLIVIAGPQGFMDATLWQHLAASLTRIVIALL 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           S  +  +L PI+++ + +P L +L   V++F           E +
Sbjct: 94  AAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 146 KILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASRAQVLWFVILPGALPEILTGLR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F+ + 
Sbjct: 206 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILEL 259

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 260 GLRALQRRLTPWH 272


>gi|15888234|ref|NP_353915.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15155886|gb|AAK86700.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 302

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 19/246 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S R+F     ++  ++++ I+++     + T        I    +    L + A  T   
Sbjct: 58  SERLFIETPWIITMLVILAIVHLAGRSFKITGG----TAISLFMIGAVGLWRDAMTTLSI 113

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A +I+++       L  +S RL  ++ P+LD+MQ++P   +L   VV F     GKV
Sbjct: 114 VTIATLIAIVIGLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIFG---IGKV 170

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G     I+AI       +       +  + R++ E + +F  S  QK + + +P ++P 
Sbjct: 171 PGLIAVVIYAIP-----PVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPT 225

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  ++      VV + M+ VG       G+G  +  AI  Q           ++ +
Sbjct: 226 IMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAI 278

Query: 252 IFLYDQ 257
             ++D+
Sbjct: 279 AIMFDR 284



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +  +      +      G +++  G           + +      T+  V +  +IA +I
Sbjct: 65  TPWIITMLVILAIVHLAGRSFKITGGTAISLFMIGAVGLWRDAMTTLSIVTIATLIAIVI 124

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +G    +   I P   ++   P+ V+   VV           +   + ++   
Sbjct: 125 GLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIFGIG----KVPGLIAVVIYA 180

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A +F  +  +    + LP   P  +TG       A   
Sbjct: 181 IPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMTGINQTIMMALAM 240

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +V+ +   G       GLG  + ++     F    L    +    +  +R
Sbjct: 241 VVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAIAIMFDR 284


>gi|254455125|ref|ZP_05068560.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198263535|gb|EDY87807.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 628

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 84/576 (14%), Positives = 185/576 (32%), Gaps = 43/576 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F  +R +PN+  +    L   +  +  +           +  +   L        A +T 
Sbjct: 64  FYGKRRWPNLGPIPWTALTAAVTVLCYYLGGWRLALLGFITFMWTAL--MGQWDIAMQTI 121

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +   + ++ +        A KS R+  V+ P+L ++Q++P   +L   V++F     G
Sbjct: 122 SVLAVTVPLAFIIGLSLGIAAWKSARVDAVIKPVLSVLQTLPFFTYLLPAVIFFKV---G 178

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              GA    ++AI       M       L  +  ++ E  +    S +Q   ++ +P + 
Sbjct: 179 PTAGAVATTVYAIP-----PMILMTTLGLQKVSPEVVEAGKMSGCSKFQMLRHVYIPSAR 233

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  +          ++ S  +VV    + +PG+G+ +   +    L       +T++
Sbjct: 234 TEILVGVNQ-------VIMLSLAMVVLTAFVGMPGLGAKLLQMLGSFKLGRSFEVGVTIV 286

Query: 250 GVIFLYDQLLFRPMIVWSNKF--------RLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            +    D++    ++     F        R +           +  + R+      IG  
Sbjct: 287 LLAVTLDRMSKAWVVKQPEHFERGTAFWVRHKMALIGLGLVVLLTMIAREIPIFAEIGRG 346

Query: 302 SWNFFSPLSNN-------VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
                    +        +  +  T G +R       L    N  +S         +   
Sbjct: 347 QDFSIGKFLDVQIKAFLDIGWVKATTGFLRAFLNVQVLIPFRNFMLSIPTPAMILLIAAF 406

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
                  +  GY +  F+   +        IT++ V   +I+A+II +PV I        
Sbjct: 407 ALALAGRRQAGYALIFFSLVALSGWWDRAIITLYSVTSAVILAAIIGLPVAIMASRSDRG 466

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S  +         FP+ V+    +          ++ +   ++      ++   I G   
Sbjct: 467 SRWMLLVCDTFQTFPSFVYLLPAIMLFGIT----DIAVIFSIVIFATVPLIRYTIEGLRT 522

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P +  E A     T ++    + LP   P    G   A   A+   I++          
Sbjct: 523 VPPEMTEAADMAGATRFQKLVNVQLPLALPTMAIGFNQAIMFAFFMVIIAAFIGTQD--- 579

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               LG  +  +       +  +  + +    L  +
Sbjct: 580 ----LGQELQRTLAGTDLGKNFVLGICVSLMALTFD 611



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 15/200 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              A  T   + SA++++ +     A +A++S R    ++ + D  Q+ P   +L   ++
Sbjct: 432 WDRAIITLYSVTSAVILAAIIGLPVAIMASRSDRGSRWMLLVCDTFQTFPSFVYLLPAIM 491

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F           ++A IF+I       +     + L  +P ++ E +     + +QK  
Sbjct: 492 LFGI--------TDIAVIFSIVIFATVPLIRYTIEGLRTVPPEMTEAADMAGATRFQKLV 543

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +      ++   +F V+ +  I   D       +G  +   +   DL   
Sbjct: 544 NVQLPLALPTMAIGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKN 596

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
               + +  +   +D  + +
Sbjct: 597 FVLGICVSLMALTFDLTIMK 616


>gi|251795736|ref|YP_003010467.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247543362|gb|ACT00381.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 272

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 12/255 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFT-YQDVLY 378
             I+ +   N  +L     V  +L + W F  + G A          ++           
Sbjct: 14  RRIKLNVSLNIRKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDVIQALWNLILSGE 73

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      +M R +    +A +I IP+G+ IG+ P     + P  +L     A    P+ +
Sbjct: 74  LFHHFAASMIRSLSGFALALVIAIPLGLAIGWYPLARELLNPVMELFRNTAALALLPVFM 133

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       +++F   W IL N IA          + A S +++ ++ +  +I
Sbjct: 134 LILGIGETSK----IAIVLFACTWPILLNTIAAVGNVDPLLIKSARSMNLSSFKLFIKVI 189

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   A  GA    I +E+           GLG  I  S      PE+  G
Sbjct: 190 LPASVPTIFTGIRMAGTGAILVLIAAEMVG------AKEGLGYLITYSQYNFQIPEMFAG 243

Query: 559 VLIMCCFVLALNRFL 573
           +L +    L +N+ L
Sbjct: 244 ILTIALLGLLINQGL 258



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 100/258 (38%), Gaps = 18/258 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71
           R++F     L+   LV     +          P   V      L +   L  + + + +R
Sbjct: 25  RKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDVIQALWNLILSGELFHHFAASMIR 84

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS   ++L+                 +L P++++ ++   L  L   ++          
Sbjct: 85  SLSGFALALVIAIPLGLAIGWYPLARELLNPVMELFRNTAALALLPVFMLILGIG----- 139

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + I  +  +  W +  +   ++ N+   L + +RS  LS ++ F  + +P S+P 
Sbjct: 140 ---ETSKIAIVLFACTWPILLNTIAAVGNVDPLLIKSARSMNLSSFKLFIKVILPASVPT 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + M+ +G    ++A+EM+   +      G+G  I  +     +  +   +LT+  +
Sbjct: 197 IFTGIRMAGTGAILVLIAAEMVGAKE------GLGYLITYSQYNFQIPEMFAGILTIALL 250

Query: 252 IFLYDQ---LLFRPMIVW 266
             L +Q   +L R +  W
Sbjct: 251 GLLINQGLSVLERKLSKW 268


>gi|299149362|ref|ZP_07042419.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_23]
 gi|298512549|gb|EFI36441.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_23]
          Length = 275

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      + I+ +      +      I  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYLTILVLAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F        A S R   +L PILD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGL---GTVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   IAW   G  ++ FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYLTILVLAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I  +P+GIW    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGLGTVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|238790131|ref|ZP_04633908.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia frederiksenii ATCC 33641]
 gi|238721800|gb|EEQ13463.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia frederiksenii ATCC 33641]
          Length = 357

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +T+   +  +V  + +        A  T   +L+++   +
Sbjct: 102 LLGMPAPIAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGMGIVILAIILDRL 324



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 64  PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPI-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  +V           +    +T+  V+  +    +
Sbjct: 110 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGMGIVILAIILDRL 324


>gi|325290856|ref|YP_004267037.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966257|gb|ADY57036.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 262

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-RPHISSKIQPFAQLLAAFP 429
               +   +     +++ R V+  + A II IP+G+ +G         ++P    L  F 
Sbjct: 53  IGLAEDGLIFGHILVSLERTVLGFLFAIIIGIPLGVLLGGGFKTFERIVKPVLFFLGQFN 112

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
               FP+ +  +    ++       ++ + + W ILFN I G         + + S    
Sbjct: 113 PFSLFPIFILILGIGEVSK----VTMIFWVSLWPILFNTITGVREVDPLLIKSSKSMGAK 168

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +R ++ P   PY  TG   + G A+   I +E+         + GLG  +  +   
Sbjct: 169 RLTIFRKVVFPSSLPYIFTGIKMSSGIAFFMLIAAEMIG------ASRGLGWLVWNAQTN 222

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
              P +    +++    L +N   
Sbjct: 223 YQIPVLYAATVVISLLGLVINGLF 246



 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 82/234 (35%), Gaps = 18/234 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLV 101
             P  I+  +    +   +  +   +  R +   + +++       L     +    ++ 
Sbjct: 43  AAPSTIITTLIGLAEDGLIFGHILVSLERTVLGFLFAIIIGIPLGVLLGGGFKTFERIVK 102

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L  +            ++             E++ +  IF   +W + F+    +  +
Sbjct: 103 PVLFFLGQFNPFSLFPIFILILGIG--------EVSKVTMIFWVSLWPILFNTITGVREV 154

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L + S+S        F  +  P S+P +   + MS    +F ++A+EMI        
Sbjct: 155 DPLLIKSSKSMGAKRLTIFRKVVFPSSLPYIFTGIKMSSGIAFFMLIAAEMIGAS----- 209

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRL 272
             G+G  +  A     +  +  A + +  +  + +   +LL R ++ W +    
Sbjct: 210 -RGLGWLVWNAQTNYQIPVLYAATVVISLLGLVINGLFRLLERKIVKWKDSVSF 262


>gi|266621607|ref|ZP_06114542.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288866705|gb|EFC99003.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 266

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 10/208 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++       +   +      ++ R+ + ++ +  I IP GI IG+    ++      + 
Sbjct: 51  RFVKTFEKPINGYMIFGHILASLKRIFLALLFSLGIGIPFGILIGWNKTFNAIFGTLFEF 110

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   + PL+V               +++  GT   ++ N   G       + +V  
Sbjct: 111 IRPIPPIAWLPLIVMWFGIG----EFPKVIIVFIGTFTPVVVNTATGIRLVEPLYLDVGR 166

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            FH    +    I LP        G  TA  G     + +E+           GLG  I 
Sbjct: 167 MFHANDRKLLTEIALPSAMQSIFAGFRTATSGGLMVVLAAEMIG------AKAGLGFLIT 220

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +    P +++G++++      ++ F
Sbjct: 221 RGQDAFDVPLIMVGMIVIAIVGTVISIF 248



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+  A++ SL     +  L   ++    +   + + ++ IP + +L   V++
Sbjct: 67  GHILASLKRIFLALLFSLGIGIPFGILIGWNKTFNAIFGTLFEFIRPIPPIAWLPLIVMW 126

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E   +  +F      +  +    +  +     +V R F  +  +    
Sbjct: 127 FGIG--------EFPKVIIVFIGTFTPVVVNTATGIRLVEPLYLDVGRMFHANDRKLLTE 178

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +M  +      + SGG   V+A+EMI          G+G  I       D+  I+
Sbjct: 179 IALPSAMQSIFAGFRTATSGGLMVVLAAEMIGAKA------GLGFLITRGQDAFDVPLIM 232

Query: 243 YAMLTMLG---VIFLYDQLLFRPMIVWSNKFRLE 273
             M+ +     VI ++  LL R +  WS   + +
Sbjct: 233 VGMIVIAIVGTVISIFTDLLERRICPWSENIKSD 266


>gi|269798745|ref|YP_003312645.1| binding-protein-dependent transporters inner membrane component
           [Veillonella parvula DSM 2008]
 gi|269095374|gb|ACZ25365.1| binding-protein-dependent transport systems inner membrane
           component [Veillonella parvula DSM 2008]
          Length = 250

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+  L       + G    +       ++          +      ++ R  +  II+ +
Sbjct: 12  VAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFLGLILGWYKGIWNYINPVVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 94/237 (39%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  ++  +          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FVAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       +    + +   + P++ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFLGLILGWYKGIWNYINPVVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|238762666|ref|ZP_04623635.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia kristensenii ATCC 33638]
 gi|238698971|gb|EEP91719.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia kristensenii ATCC 33638]
          Length = 358

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 103 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 162

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 163 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 219

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 220 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 274

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 275 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 325



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 65  PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 110

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +T+  V+  +    +
Sbjct: 111 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 163

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 164 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 219

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 220 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 279

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 280 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 325


>gi|28870234|ref|NP_792853.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213970351|ref|ZP_03398480.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301381134|ref|ZP_07229552.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302058923|ref|ZP_07250464.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302132547|ref|ZP_07258537.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853480|gb|AAO56548.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213924822|gb|EEB58388.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331015472|gb|EGH95528.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 321

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L +  +   A  T   +L+++V  ++       L A+S RL  VL P LD MQ++P   +
Sbjct: 89  LGLIGVWADAMTTLSLVLTSLVFCVVIGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVY 148

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+ F     G V G  +  IF++       +       +  +P D  E +R+F  +
Sbjct: 149 LVPVVMLFG---IGNVPGVLVTIIFSVA-----PLVRLTNLGIRQVPEDKVEAARAFGCT 200

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q  + + +P + P ++  +  ++      VV + MI VG       G+G  +   I  
Sbjct: 201 RRQMLFKVQLPLAAPTIMAGLNQALMLSLSMVVIASMISVG-------GLGLMVLRGIGR 253

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+       + ++ +    D+L
Sbjct: 254 LDMGLATVGGVGLVLLAIFLDRL 276



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 13/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V   + I +  ++     G     + ++    T   ++ V      T+  V+  ++   +
Sbjct: 57  VPPTIFIIFATLLGWQVGGKKVGVMCFV--TLTLLGLIGVWADAMTTLSLVLTSLVFCVV 114

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+G+       +   ++P    +   PA V+   VV          N+   L+ I  
Sbjct: 115 IGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIIF 170

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   ++     G    P D  E A +F  T  +    + LP   P  + G   A   + +
Sbjct: 171 SVAPLVRLTNLGIRQVPEDKVEAARAFGCTRRQMLFKVQLPLAAPTIMAGLNQALMLSLS 230

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + S G       GLG  +     +       +G + +    + L+R 
Sbjct: 231 MVVIASMISVG-------GLGLMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276


>gi|299822937|ref|ZP_07054823.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter [Listeria grayi DSM 20601]
 gi|299816466|gb|EFI83704.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter [Listeria grayi DSM 20601]
          Length = 287

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F+L++ ++   + G +       I+ ++ I      L      T   ++ + +++++ 
Sbjct: 55  LVFILILAVLAFFISGKKIGLTAFVIIGLLFIR--DQELWDALVNTITLVIVSSLVAIII 112

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   +KS+    ++ PILD MQ++P   +L   V +F     G V G   + IFA+
Sbjct: 113 GVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFAL 169

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  +P +L E S S+  +GWQK   + +P +   ++  +  ++  
Sbjct: 170 PPTVRF-----TNLGIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVML 224

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++   +     A ++++ +  + D+ 
Sbjct: 225 ALSMVVIASMI-------GAPGLGRQVLQALQRAQVGNGFVAGVSLVILAIIMDRF 273



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  ++ I    V+     G       +++    +     +      T+  V+V  ++A I
Sbjct: 52  IPPLVFILILAVLAFFISGKKIGLTAFVIIGLLFIRDQELWDALVNTITLVIVSSLVAII 111

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +PVG+W+       S I+P    +   P  V+    V+      +       +     
Sbjct: 112 IGVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF---- 167

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P +  E + S+  TGW+    + LP      + G       A +
Sbjct: 168 ALPPTVRFTNLGIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVMLALS 227

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  + ++ ++       +  + +    + ++RF
Sbjct: 228 MVVIASMIG-------APGLGRQVLQALQRAQVGNGFVAGVSLVILAIIMDRF 273


>gi|212703296|ref|ZP_03311424.1| hypothetical protein DESPIG_01339 [Desulfovibrio piger ATCC 29098]
 gi|212673256|gb|EEB33739.1| hypothetical protein DESPIG_01339 [Desulfovibrio piger ATCC 29098]
          Length = 278

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 29/279 (10%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWL 382
           P   +   +   V  +  I W  +   V   +    +  I     +       +  +   
Sbjct: 2   PGRIIFWAAPLLVPVLFFIVWESMATLVGNSLILPPLEEIGTLLAHPLDNVIAMGTLAGN 61

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I++ RV+     A ++ +P+G+ +G+   +   +  F  +    P   + PLV++   
Sbjct: 62  IGISLVRVLCGYAAAVLLGVPLGVAMGYYAGLHRLLNLFLGMFRPIPPLAWVPLVLAWFG 121

Query: 443 YYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
              L                N  + +  ++  G  + IL + + G         + A   
Sbjct: 122 VSSLATAMGLPRSEIYYYLNNLKISMLFIIFIGALFPILTSAVHGVQTVNRTLVDSARVL 181

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +    +  I+LP   P  V G     G AW   + +E+          +G+G  I  +
Sbjct: 182 GASERDIFTKILLPAAAPSIVNGLRIGLGVAWMCLVSAEMLPG-----SLSGVGYLITHA 236

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582
              G    V+ G++ +      L+          Y +  
Sbjct: 237 YTVGRTDVVIAGMISISVVGALLDMAFQWIERRKYAWKQ 275



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 24/263 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLSAMVI 78
           + F +V   +  L+          +I  ++   LD    + +L      + +R+L     
Sbjct: 16  VLFFIVWESMATLVGNSLILPPLEEIGTLLAHPLDNVIAMGTLAGNIGISLVRVLCGYAA 75

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA---- 134
           ++L              L  +L   L + + IP L ++   + +F        +G     
Sbjct: 76  AVLLGVPLGVAMGYYAGLHRLLNLFLGMFRPIPPLAWVPLVLAWFGVSSLATAMGLPRSE 135

Query: 135 --------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   +++ +F IF   ++ +  S    +  + R L + +R    S    F  + +P
Sbjct: 136 IYYYLNNLKISMLFIIFIGALFPILTSAVHGVQTVNRTLVDSARVLGASERDIFTKILLP 195

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P +V  + + +   W  +V++EM+        L G+G  I  A        ++  M+
Sbjct: 196 AAAPSIVNGLRIGLGVAWMCLVSAEMLPG-----SLSGVGYLITHAYTVGRTDVVIAGMI 250

Query: 247 TMLGVIFLYD---QLLFRPMIVW 266
           ++  V  L D   Q + R    W
Sbjct: 251 SISVVGALLDMAFQWIERRKYAW 273


>gi|118588253|ref|ZP_01545662.1| probable amino acid ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
 gi|118438959|gb|EAV45591.1| probable amino acid ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
          Length = 294

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ +  + ++ +           +  + + V  L +   RT   +    +++++    
Sbjct: 60  PIILAVFALAVYFLSRKISVTVGTVLALVFIGVFGLWEDTMRTVAMVTVCTLLAIVLGMP 119

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + A+S R+   + PILD+MQ++P   +L   V+ F     GKV G     I+AI   
Sbjct: 120 IGIVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMIFG---IGKVPGLIAVVIYAIP-- 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  +  D+ E + +F  S  QK   + +P ++P ++  +   +     
Sbjct: 175 ---PMIRLTNLGIRLVDTDVLEAADAFGSSARQKLMNVQLPLALPTIMAGINQCIMMSLS 231

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  + +AI  Q L A + + L+++ +  ++D+
Sbjct: 232 MVVVASMIGV-------RGLGQEVLVAINNQYLTAGMLSGLSIVAIAIIFDR 276



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 74/226 (32%), Gaps = 14/226 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVG 405
              V  +A+    + I   V        + V  L      T+  V V  ++A ++ +P+G
Sbjct: 62  ILAVFALAVYFLSRKISVTVGTVLALVFIGVFGLWEDTMRTVAMVTVCTLLAIVLGMPIG 121

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +     +   + P   L+   P+ V+   VV           +   + ++      ++
Sbjct: 122 IVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMIFGIG----KVPGLIAVVIYAIPPMI 177

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      D  E A +F  +  +    + LP   P  + G       + +  +V+ 
Sbjct: 178 RLTNLGIRLVDTDVLEAADAFGSSARQKLMNVQLPLALPTIMAGINQCIMMSLSMVVVAS 237

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +           GLG  +  +         +L  L +    +  +R
Sbjct: 238 MIG-------VRGLGQEVLVAINNQYLTAGMLSGLSIVAIAIIFDR 276


>gi|169338022|ref|ZP_02621223.2| glycine betaine transport system permease protein opuAB
           [Clostridium botulinum C str. Eklund]
 gi|169295381|gb|EDS77514.1| glycine betaine transport system permease protein opuAB
           [Clostridium botulinum C str. Eklund]
          Length = 277

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 17/237 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
              +IG+  I L  + + T    I+ ++ I     +L Q    T + ++ + VISLL   
Sbjct: 48  LFFIIGLSVIALILVNKKTALFTILGLLLIF--QMNLWQMFIETFVLVIISTVISLLIGI 105

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L  K R L  ++ P+LD MQ++P   +L   V++F     G V G     IF++  
Sbjct: 106 PIGILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFFG---IGNVPGIISTVIFSMPP 162

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +            L  +P++LEEV +SF  +  +  + + +P ++P ++  +  S+    
Sbjct: 163 A-----VRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPSIMAGINQSIMMAL 217

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             VV + MI          G+GS +   I+  D+     A L ++ +  + D++  R
Sbjct: 218 SMVVVASMI-------GTRGLGSQVLSGIQRNDIGVGFEAGLAVVILAIILDRITRR 267



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 78/231 (33%), Gaps = 12/231 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           +F+   +  +A+ +  +                 +W   I T   V++  +I+ +I IP+
Sbjct: 48  LFFIIGLSVIALILVNKKTALFTILGLLLIFQMNLWQMFIETFVLVIISTVISLLIGIPI 107

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +  +  +   I P    +   P+ V+    V      ++   +   +     +    
Sbjct: 108 GILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFFGIGNVPGIISTVIF----SMPPA 163

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P + +EV  SF          I +P   P  + G   +   A +  +V+
Sbjct: 164 VRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPSIMAGINQSIMMALSMVVVA 223

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +         T GLG+ +    ++          L +    + L+R    
Sbjct: 224 SMIG-------TRGLGSQVLSGIQRNDIGVGFEAGLAVVILAIILDRITRR 267


>gi|259907586|ref|YP_002647942.1| glycine betaine transporter membrane protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963208|emb|CAX54692.1| Glycine betaine/L-proline transport system permease protein
           [Erwinia pyrifoliae Ep1/96]
 gi|283477428|emb|CAY73344.1| Glycine betaine/L-proline ABC transport system,inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 387

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +++   +  +V  + +        A  T   +L+A++  +
Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSLSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 194 VIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   +  +      +    P           
Sbjct: 96  PLDSWV------TTAIDWVVTHFRPLFQGIRLPIDYILSAFQQLLLGMPAPV-------- 141

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++ +   ++  +V           +    +    V+  ++   +
Sbjct: 142 ---AIIVFALIAWQLSSLSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCIV 194

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356


>gi|159186005|ref|NP_356598.2| ABC transporter, membrane spanning protein (glycine betaine)
           [Agrobacterium tumefaciens str. C58]
 gi|159141139|gb|AAK89383.2| ABC transporter, membrane spanning protein (glycine betaine)
           [Agrobacterium tumefaciens str. C58]
          Length = 295

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +VI I+  L      +     +   +   +    + +   +T   +    V+S++    
Sbjct: 61  PVVILIVGALAWFASRSATIVSLCCGILFAIGWFGMWEDTMKTVSMIFVCAVMSIVIGLP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S RL  V+ P+LD+MQ++P   +L   V+       G+V G     + A+   
Sbjct: 121 IGIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVVMLLG---IGRVPG-----VIAVIIY 172

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M       +  +  D+ E + +F  S  QK + + +P ++P ++  +  ++     
Sbjct: 173 AIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     ++  L ++G+  ++D++
Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 92/281 (32%), Gaps = 29/281 (10%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
             F R  G +    F+PL + +    R L    +              +  +  + WF  
Sbjct: 27  RGFTRTYGGAIEGLFTPLQSFLIWAERLLIGAPWPVV-----------ILIVGALAWFAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                + +    +  I     ++D          T+  + V  +++ +I +P+GI +   
Sbjct: 76  RSATIVSLCCGILFAIGWFGMWED-------TMKTVSMIFVCAVMSIVIGLPIGIAMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + + P   ++   P+ V+   VV  +        +   + +I      ++     G
Sbjct: 129 NRLQNVVNPVLDVMQTMPSFVYLIPVVMLLGIGR----VPGVIAVIIYAIPPMIRLTNLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                +D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  + ++     F   V   L +    +  +R 
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278


>gi|121610569|ref|YP_998376.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555209|gb|ABM59358.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 275

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 101/281 (35%), Gaps = 23/281 (8%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           + + R L                + R  ++L + +F +   +                + 
Sbjct: 2   RPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLASP 61

Query: 374 QDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             +L   WL            +T++RV+   ++A+ + +P+GI +G    I +  +PF  
Sbjct: 62  PTMLRQAWLLLTEYGFVKDIGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVS 121

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                PA+ F PL++               L++  G+ + I   V     +   D  E A
Sbjct: 122 FCRYLPASAFIPLLILWAGIGEAQK----ILVIFIGSVFQITLMVAVTVGSARRDLVEAA 177

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +           +++PG  P          G AW   IV+E+         ++G+G  I
Sbjct: 178 YTLGAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMI 231

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
            +S    +  +++ G++ +    L  +   + L   L+ + 
Sbjct: 232 TDSQALLNTGQIIFGIITIGLIGLLSDLAFKALNQRLFAWS 272



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 93/256 (36%), Gaps = 21/256 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  L  FV+ + +      G          P  ++    + L  +   +    T  R+L+
Sbjct: 31  LLGLAFFVIFVALWTWFTLGGWVSPTFLASPPTMLRQAWLLLTEYGFVKDIGMTVWRVLA 90

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V++              + +     P +   + +P   F+   +++            
Sbjct: 91  GFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG-------- 142

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   I  IF   V+ +T  +  ++ +  RDL E + +           + +P + PG+  
Sbjct: 143 EAQKILVIFIGSVFQITLMVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAAPGIAE 202

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +   W +V+ +E+I          GIG  I  +    +   I++ ++T+  +  L
Sbjct: 203 TLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIITIGLIGLL 256

Query: 255 YD---QLLFRPMIVWS 267
            D   + L + +  WS
Sbjct: 257 SDLAFKALNQRLFAWS 272


>gi|328468887|gb|EGF39847.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus 10329]
          Length = 361

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+++   LL         A+S+     + PILD MQ+ P   +L   V+ F 
Sbjct: 139 AMTTLALVLTSVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P +L E   SF  +  Q  + + 
Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  L D++
Sbjct: 304 GLGIVILAILLDRI 317



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  +   +AWQ   + +   T   ++++  +G       T+  V+  +    +I +P+G
Sbjct: 102 IMVLILFLLAWQFSNFKLGLSTLVSLVFIGLIGAWSQAMTTLALVLTSVFFCLLIGLPMG 161

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  ++P    +   PA V+   +V          N+   ++ I      ++
Sbjct: 162 IWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVV 217

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P +  E   SF     +    I LP   P  + G       + +  +++ 
Sbjct: 218 RLTILGIQQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIAS 277

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 278 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|328543758|ref|YP_004303867.1| ATP-binding cassette (ABC) superfamily transporter permease
           [polymorphum gilvum SL003B-26A1]
 gi|326413502|gb|ADZ70565.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Polymorphum gilvum SL003B-26A1]
          Length = 276

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 89/280 (31%), Gaps = 16/280 (5%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV------AIGIAW 361
            L      +    G  R    +    L        +L + W+     V           +
Sbjct: 2   SLEGAAGDIPALAGPARASQGKTLRSLGFAGLGMVLLMVLWWVGGVLVERNPNTVAFAGF 61

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +  +              +   ++ RV+  + +A  I +P+GI +G  P +       
Sbjct: 62  APVPALSRLADMVASGEAWAMIVPSLERVLGGLAVAIAIGVPLGILVGRVPMLREITNIP 121

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q L       + P+ V     +       +  L+     W +LF   AG       + +
Sbjct: 122 FQFLRMISPLSWMPIAVMAFPTWDG----AIVFLIAIAALWPVLFATAAGLKRVDPAWFK 177

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA +     W     IILP I    +TG   A G AW   + +E          T+GLG 
Sbjct: 178 VARNLGARPWHMLFLIILPAISQDILTGIRLALGVAWIVLVPAEYLG------VTSGLGY 231

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            I ++ +   +  +   V+I+      L+      +    
Sbjct: 232 AINDARDTLEYDRLAATVVIIGAIGFGLDFLCQQAIARLS 271



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P   +  +   +           +  R+L  + +++        L  +   L  +    
Sbjct: 62  APVPALSRLADMVASGEAWAMIVPSLERVLGGLAVAIAIGVPLGILVGRVPMLREITNIP 121

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              ++ I  L ++   V+ F           + A +F I  + +W + F+    L  +  
Sbjct: 122 FQFLRMISPLSWMPIAVMAF--------PTWDGAIVFLIAIAALWPVLFATAAGLKRVDP 173

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              +V+R+     W   + + +P     ++  + +++   W  +V +E + V        
Sbjct: 174 AWFKVARNLGARPWHMLFLIILPAISQDILTGIRLALGVAWIVLVPAEYLGV------TS 227

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G+G  I  A    +   +   ++ +  + F  D L
Sbjct: 228 GLGYAINDARDTLEYDRLAATVVIIGAIGFGLDFL 262


>gi|227509979|ref|ZP_03940028.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane-spanning subunit [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227190585|gb|EEI70652.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane-spanning subunit [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 283

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSA 75
           IFDL+   L I ++    + +   T    ++    I L         +  ++T   +L++
Sbjct: 44  IFDLIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTS 103

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I+L+         AKS+ + +++ PILD MQ++P   +L   V +F     G V G  
Sbjct: 104 SLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVI 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P DL E + S+  + WQK   + +P +   L+  
Sbjct: 161 ASVIFAMP-----PTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLIKVQLPLAKSTLMAG 215

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D  +   A L ++ +  + 
Sbjct: 216 VNQSMMLSLSMVVIASMI-------GAMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIIL 268

Query: 256 DQL 258
           D++
Sbjct: 269 DRI 271



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           ++ I+ F V+              W  IG+ V    Y            T+  V+   +I
Sbjct: 47  LIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTSSLI 106

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I +P+GIW+     +   ++P    +   PA V+    V+      +   +   +  
Sbjct: 107 ALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIF- 165

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    P D  E A S+  T W+    + LP      + G   +   
Sbjct: 166 ---AMPPTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLIKVQLPLAKSTLMAGVNQSMML 222

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ +           GLG  +  +  +          L +    + L+R 
Sbjct: 223 SLSMVVIASMIG-------AMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIILDRI 271


>gi|218549967|ref|YP_002383758.1| taurine transporter subunit [Escherichia fergusonii ATCC 35469]
 gi|218357508|emb|CAQ90147.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|325498342|gb|EGC96201.1| taurine transporter subunit [Escherichia fergusonii ECD227]
          Length = 275

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
             R  +P +     S   ++ ++ I+W    C +   +      Q +  +V     Q  +
Sbjct: 13  RWRLRWPLSRQLTLSFSVLAVLVTIWWAVTACQLISPLFLPPPQQVLAKLVTIAGAQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     +M R+++ +I A +I IP G+ +G  P I   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V         P + L  L IF     +  + +AG  +        A S      +   
Sbjct: 133 LMVIWFGIGE-TPKVLLIWLAIFA---PLTMSALAGVQSVQQVRIRAAQSLGANRVQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 YVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAVIAFLLELSLRALQRRLTPW 270



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 94/216 (43%), Gaps = 17/216 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+L A++ +++           S  +  +L PI+++ + +P L +L  
Sbjct: 74  ATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPL 133

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F      KV+   LA            +T S    + ++ +     ++S   +  Q
Sbjct: 134 MVIWFGIGETPKVLLIWLAIFA--------PLTMSALAGVQSVQQVRIRAAQSLGANRVQ 185

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             WY+ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 186 VLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             +L  +  +  + FL +   + L R +  W  + +
Sbjct: 240 DVVLAGIAVIAVIAFLLELSLRALQRRLTPWHGEVK 275


>gi|238018381|ref|ZP_04598807.1| hypothetical protein VEIDISOL_00206 [Veillonella dispar ATCC 17748]
 gi|237864852|gb|EEP66142.1| hypothetical protein VEIDISOL_00206 [Veillonella dispar ATCC 17748]
          Length = 250

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++  L       + G    +       ++          +      ++ R  +  +I+ +
Sbjct: 12  IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFMGYLISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  +I  L          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFMGYLISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +  +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|312958359|ref|ZP_07772880.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311287423|gb|EFQ65983.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 278

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L           +        +  + +    V+  +   +    +   +       VL  
Sbjct: 6   LPATAVKPAARTVIPVRRSLSTRWISVLTLVVLLAIWWAVTATGLIEPLFLPPPSAVLQK 65

Query: 380 IWLGCIT--------------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            WL   T              + R+ + +  A +  +PVGI IG        + P  +  
Sbjct: 66  GWLLATTGYMDSTLWQHLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIEFY 125

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL+V       L+      LL+       I      G           A S
Sbjct: 126 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 181

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  +  
Sbjct: 182 LGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 235

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           + +      VVLG+L++     A+    R L   L  +
Sbjct: 236 AAQFLVTDVVVLGILVIALIAFAMEMGLRALQRKLVPW 273



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 98/267 (36%), Gaps = 26/267 (9%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDI----VPITLDVHSLPQ 63
           RR     +  +  ++V+  I   +             P  ++              +L Q
Sbjct: 22  RRSLSTRWISVLTLVVLLAIWWAVTATGLIEPLFLPPPSAVLQKGWLLATTGYMDSTLWQ 81

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+   +  ++L           +R    +L P+++  + IP L +L   V++ 
Sbjct: 82  HLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIEFYRPIPPLAYLPLIVIWC 141

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      EL+ +  I+ +    +  +    +  +       ++S   S  Q   ++
Sbjct: 142 GIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASRAQLIRHV 193

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +      ++ 
Sbjct: 194 ILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVL 247

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWS 267
            +L +  + F  +   + L R ++ W 
Sbjct: 248 GILVIALIAFAMEMGLRALQRKLVPWH 274


>gi|82778052|ref|YP_404401.1| glycine betaine transporter membrane protein [Shigella dysenteriae
           Sd197]
 gi|309786249|ref|ZP_07680877.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 1617]
 gi|81242200|gb|ABB62910.1| high-affinity transport system for glycine betaine and proline
           [Shigella dysenteriae Sd197]
 gi|308925994|gb|EFP71473.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 1617]
          Length = 354

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL+    + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLSMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLPLVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F            +  + 
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGN--------VPGVV 212

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
              T  +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 213 VTITFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 88/242 (36%), Gaps = 15/242 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F QL  +      + +F         +G+   ++  ++           +    +T+  V
Sbjct: 97  FQQLLLSMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAM----VTLPLV 152

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+
Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G 
Sbjct: 209 PGVVVTITFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A +  +++ + + G       GLG  +     +       +G + +    + L+
Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321

Query: 571 RF 572
           R 
Sbjct: 322 RL 323


>gi|310764905|gb|ADP09855.1| glycine betaine transporter membrane protein [Erwinia sp. Ejp617]
          Length = 387

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q ++    +  +V  + +        A  T   +L+A++  +
Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 194 VIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 94/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + +I       F  +   V  +      +    P           
Sbjct: 96  PLDSWV------TTAIDWIVSHFRPLFQGIRLPVDYILNAFQQLLLGMPAPV-------- 141

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        +  +   ++  +V           +    +    V+  ++   +
Sbjct: 142 ---AIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCIV 194

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356


>gi|78484380|ref|YP_390305.1| binding-protein dependent transport system inner membrane protein
           [Thiomicrospira crunogena XCL-2]
 gi|78362666|gb|ABB40631.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Thiomicrospira crunogena XCL-2]
          Length = 276

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 16/251 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
           + P     + +      +L + W+     +A     ++        T+  + Y+I  G I
Sbjct: 21  NLPGWLQSVINATSGMGILLLVWWIGGILIASNPDTEAFAAFAPGPTFSALWYLIETGSI 80

Query: 386 ------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 +++R++  +    +I +P G+ +G+            Q L       + P+ V 
Sbjct: 81  WETIYSSLYRIITGLFWGVVIGVPTGVLVGYFLMFRQVANMPFQFLRMISPLAWMPIAVL 140

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
               +       +  L+   T W I+F    G      ++ +VA +    G++  R +I+
Sbjct: 141 AFETWDA----AIIFLLSMATIWPIVFGTAHGVQRIDPNWFQVARNLGADGYQMLRRVIM 196

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P I      G   A G AW   + +E          T+GLG  I ++ +   +  +   V
Sbjct: 197 PAIAQDVFAGIRLAIGVAWVVLVPAEYLG------VTSGLGYAINDARDTLDYDTLAAIV 250

Query: 560 LIMCCFVLALN 570
           +++      L+
Sbjct: 251 VVIGIIGYLLD 261



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P      +   ++  S+ +    +  R+++ +   ++       L         V    
Sbjct: 63  APGPTFSALWYLIETGSIWETIYSSLYRIITGLFWGVVIGVPTGVLVGYFLMFRQVANMP 122

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              ++ I  L ++   V+ F           + A IF +  + +W + F     +  I  
Sbjct: 123 FQFLRMISPLAWMPIAVLAFETW--------DAAIIFLLSMATIWPIVFGTAHGVQRIDP 174

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +  +V+R+    G+Q    + +P     +   + +++   W  +V +E + V        
Sbjct: 175 NWFQVARNLGADGYQMLRRVIMPAIAQDVFAGIRLAIGVAWVVLVPAEYLGV------TS 228

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G+G  I  A    D   +   ++ +  + +L D +
Sbjct: 229 GLGYAINDARDTLDYDTLAAIVVVIGIIGYLLDFI 263


>gi|71083984|ref|YP_266704.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71063097|gb|AAZ22100.1| glycine betaine/L-proline transport system permease [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 717

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 95/545 (17%), Positives = 180/545 (33%), Gaps = 55/545 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I + V    + + +T   +L A  +S LF   +  +A KS+R+   L PIL +MQ++P  
Sbjct: 189 IYISVFGQWKPSMQTLSFILVAAPLSFLFGLTFGVMAFKSKRVEKFLYPILLVMQTMPQY 248

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +V F           + AA+       V  M       L  IP ++ E  R   
Sbjct: 249 AVLVPAIVLFGIG--------DHAAVIITMVVAVPPMILLTLLGLRGIPSEVIEAGRMSG 300

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            + WQ    + +P +   ++  +          ++    + V    I   G+G  + LA+
Sbjct: 301 CNNWQLMTKVLIPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLAL 353

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            + ++   L A L +  +  L D++     + W+NK         Y   +  +  F    
Sbjct: 354 NQLNIGLALEAGLCISLIAILLDKMS----LAWANKQIDYFGNLTYFQRNKNILFFAAAV 409

Query: 294 FLRFI-----------------------GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
            L  I                       G S+ +F++   + +         I   +   
Sbjct: 410 ILGIIFSYLGSFYFKDGSNYLFEVPHNKGISTADFWNKGVDWIWDTFFHTLKIFNTWLIV 469

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFR 389
            +          M  +    +V G    I       +V   T    L   W    +T++ 
Sbjct: 470 DVLQPMRALYLRMPAVATLVLVIGAGYIIGGIRSALVVGGLTLFIALSPWWDRALVTLYM 529

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
               + I++II   VGI      H ++ +     +   FP+ V+   V+        +  
Sbjct: 530 ATFGVFISTIIGFTVGIISFQNKHTANFMLGVCDIFQTFPSFVYLIPVMMLFGVTDTSVL 589

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + + +        Y     I G  + P    + A+   +   +    I  P  FP+ + G
Sbjct: 590 IAVIVYATIPATRY----TIEGLRSVPEALHDAATMSGVNKVQRLLKIEFPLAFPHMMLG 645

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLA 568
                  A    I+               LG YI ++        + L + L +    L 
Sbjct: 646 LNQTIVFALFMVIIGAFIGTED-------LGQYILKALSDKKGAGIGLTLGLCVAFIGLI 698

Query: 569 LNRFL 573
            +  +
Sbjct: 699 FDHLI 703


>gi|303231730|ref|ZP_07318453.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513679|gb|EFL55698.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 250

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R  +  II+ +  +  G+ +G+   I + I P  Q++       + P 
Sbjct: 49  GVLFKDIADSLVRFFIGYIISVVAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPF 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V               +++     + +L + ++        + +VA +F I        
Sbjct: 109 IVLFFGIGQA----PAIVIIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFK 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP +FP   +G   A G AW   +  E+          TGLG  I +         ++
Sbjct: 165 IVLPAVFPGIASGLHIALGTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLM 218

Query: 557 LGVLIMCCFVLALN 570
           + +L +    L L+
Sbjct: 219 VAILTIGFVGLLLD 232



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  +I  L          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FIAAWLIWELIVRLGGFNEALLPTPHKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +  +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|296101489|ref|YP_003611635.1| sulfonate/nitrate/taurine transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295055948|gb|ADF60686.1| sulfonate/nitrate/taurine transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 275

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 14/237 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W   +     G     +  I     + D      LG  ++ R++V ++ A II IPVGI
Sbjct: 45  AWISPLFLPPPGQVLAKLITIAGPQGFMDATLWQHLGA-SLARILVALLAAVIIGIPVGI 103

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G  P +   + P  +L    P   + PL+V        +      LL+       +  
Sbjct: 104 AMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAM 159

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           + +AG  +        A S   +  +   ++ILPG  P  +TG     G  W+  + +E+
Sbjct: 160 SALAGVKSAQQVRIRAAQSLGASRTQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAEL 219

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +       T GLG  +  + E  +   V+ G+ ++      L    R L   L  +
Sbjct: 220 IA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLELGLRALQRRLTPW 270



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 89/218 (40%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+   +  R+L A++ +++           S  +  +L P++++ + +P 
Sbjct: 68  PQGFMDATLWQHLGASLARILVALLAAVIIGIPVGIAMGLSPTVRGILDPLIELYRPVPP 127

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F           E + I  I+ +    +  S    + +  +     ++S 
Sbjct: 128 LAYLPLMVIWFGIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSL 179

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 180 GASRTQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 233

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  +  +  + F  +   + L R +  W 
Sbjct: 234 GEFLATDVVLAGIAVIAVIAFGLELGLRALQRRLTPWH 271


>gi|156935089|ref|YP_001439005.1| taurine transporter subunit [Cronobacter sakazakii ATCC BAA-894]
 gi|156533343|gb|ABU78169.1| hypothetical protein ESA_02940 [Cronobacter sakazakii ATCC BAA-894]
          Length = 275

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  ++ A++I IPVGI +G  P + + + P  +L    P   + PL+V     
Sbjct: 81  GASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   + W+   ++ILPG  
Sbjct: 141 GETSK----VLLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRWQLLWHVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 250

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 251 LVAFILELGLRALTRRLTPW 270



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 98/247 (39%), Gaps = 22/247 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
                + L        P+ ++  +     P      +L  +   +  RML+A++ + L  
Sbjct: 39  WAATALQLVSPLFLPAPQQVLRQLITIAGPQGFMDATLWAHLGASLGRMLTALLAAALIG 98

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                    +  L  +L P++++ + IP L +L   V++F      KV+   LA    + 
Sbjct: 99  IPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETSKVLLIYLAIFAPVA 158

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S +          + +  +     ++S   S WQ  W++ +P ++P ++  + + +  G
Sbjct: 159 MSAL--------AGVKSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVG 210

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLF 260
           W  +VA+E+I          G+G  +  A +      +L  +  +  V F+ +   + L 
Sbjct: 211 WSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALT 264

Query: 261 RPMIVWS 267
           R +  W 
Sbjct: 265 RRLTPWH 271


>gi|319782578|ref|YP_004142054.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168466|gb|ADV12004.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 267

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 22/254 (8%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---------ITMFRVVV 392
             L +    +V G+AIG    + G +      Q     I L            ++ RV+ 
Sbjct: 23  RGLALNLCGLVAGIAIGWVLTAGGAVGLPPPPQVASRFIDLIANGQLATDIMSSLARVMT 82

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++  I+ IPVG  +G+     S I+P+ Q     P     PL +  +           
Sbjct: 83  GFLLGVILAIPVGFVMGWYKVARSLIEPYLQFFRMIPPLAIIPLAIVTMGI----DETPK 138

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             ++   +    +     G  +        A          +  +I+P   P+ + G   
Sbjct: 139 VFVIFLASFLASVVATYQGVISVDKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRI 198

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G AW   + +E+ +        TGLG  + ++      P + + ++ +    LA++R 
Sbjct: 199 GLGSAWATLVAAELIA------AQTGLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRI 252

Query: 573 LW---HPLYLYGTR 583
           L      L ++  R
Sbjct: 253 LLVIERRLTVWQER 266



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 17/240 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   G      P  +       +    L      +  R+++  ++ ++       +   
Sbjct: 41  VLTAGGAVGLPPPPQVASRFIDLIANGQLATDIMSSLARVMTGFLLGVILAIPVGFVMGW 100

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
            +    ++ P L   + IP L  +   +V        K        +F IF +       
Sbjct: 101 YKVARSLIEPYLQFFRMIPPLAIIPLAIVTMGIDETPK--------VFVIFLASFLASVV 152

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + YQ + ++ + +   +R         F  + +P S P ++  + + +   W  +VA+E+
Sbjct: 153 ATYQGVISVDKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRIGLGSAWATLVAAEL 212

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
           I          G+G  +  A    DL  I  +++T+  +    D++L    R + VW  +
Sbjct: 213 IAAQT------GLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRILLVIERRLTVWQER 266


>gi|227512913|ref|ZP_03942962.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus buchneri
           ATCC 11577]
 gi|227523041|ref|ZP_03953090.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083913|gb|EEI19225.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus buchneri
           ATCC 11577]
 gi|227089859|gb|EEI25171.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 283

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSA 75
           IFDL+   L I ++    + +   T    ++    I L         +  ++T   +L++
Sbjct: 44  IFDLIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTS 103

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I+L+         AKS+ + +++ PILD MQ++P   +L   V +F     G V G  
Sbjct: 104 SLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVI 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P DL E + S+  + WQK   + +P +   L+  
Sbjct: 161 ASVIFAMP-----PTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLVKVQLPLAKSTLMAG 215

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D  +   A L ++ +  + 
Sbjct: 216 VNQSMMLSLSMVVIASMI-------GAMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIIL 268

Query: 256 DQL 258
           D++
Sbjct: 269 DRI 271



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           ++ I+ F V+              W  IG+ V    Y            T+  V+   +I
Sbjct: 47  LIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTSSLI 106

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I +P+GIW+     +   ++P    +   PA V+    V+      +   +   +  
Sbjct: 107 ALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIF- 165

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    P D  E A S+  T W+    + LP      + G   +   
Sbjct: 166 ---AMPPTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLVKVQLPLAKSTLMAGVNQSMML 222

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ +           GLG  +  +  +          L +    + L+R 
Sbjct: 223 SLSMVVIASMIG-------AMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIILDRI 271


>gi|71737350|ref|YP_277000.1| taurine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557903|gb|AAZ37114.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 291

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%)

Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330
           RLE        DS  L    K    +    +   + S  + ++  L   L +        
Sbjct: 3   RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +++       + +L   W     G      WQ +G                    ++ R+
Sbjct: 63  WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +  IP+GI IG          P  +     P   + PL+V        +   
Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       I      G           A S   T W+  R+++LP   P  +TG 
Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPIKVRAAQSLGATLWQLIRHVVLPSALPDILTGI 219

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++     A+ 
Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273

Query: 571 ---RFLWHPLYLY 580
              R L   L  +
Sbjct: 274 LGLRALQRRLVPW 286



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+  ++L           +R    +  P+++  + IP L +L  
Sbjct: 90  ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + +  I+ +    +  +    +  +       ++S   + WQ
Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPIKVRAAQSLGATLWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287


>gi|37525249|ref|NP_928593.1| glycine betaine transporter membrane protein [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784676|emb|CAE13576.1| Glycine betaine/L-proline transport system permease protein proW
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 361

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 163 FCIIVGLPLGIWLAHSKRAAKIIQPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVIVT 219

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  + 
Sbjct: 220 IIFA-----LPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVN 274

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  L D+
Sbjct: 275 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAILLDR 327

Query: 258 L 258
           L
Sbjct: 328 L 328



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +          +   V         IR                        F  +
Sbjct: 61  PFQHPLIPLDSWVTQAIDWIVLNFRPAFQGIRVPIDFVLSGFEQCLTSIPAPIAILFFAL 120

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +      I  +++     ++        +T+   +  ++   I+ +P+GIW+    
Sbjct: 121 IAWQLSGIGMGITALISLVIIGEIG-AWHESMVTLSLALTSLLFCIIVGLPLGIWLAHSK 179

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  IQP    +   PA V+   +V          N+   ++ I      I+   I G 
Sbjct: 180 RAAKIIQPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVIVTIIFALPPIVRLTILGI 235

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A SF  +  +    + LP   P  + G       A +  +++ + + G  
Sbjct: 236 KQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-- 293

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 294 -----GLGQMVLRGIGRLDMGLATVGGVGIVILAILLDRL 328


>gi|147676909|ref|YP_001211124.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pelotomaculum thermopropionicum SI]
 gi|146273006|dbj|BAF58755.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pelotomaculum thermopropionicum SI]
          Length = 217

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 7/208 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTYQ 374
           R + V+R      F +  +  R+  +  IF    +         +       +V   +  
Sbjct: 14  RNVRVMRERIIGAFGRKQALYRMISVAAIFGAWQLAANHYHSNFLMPSPWKTMVTFISVV 73

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               V+    IT+ RV+   + A +I +P+G  +G+   + + + P    +   P   + 
Sbjct: 74  HDPEVVKNLLITLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWV 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +                L+ F   + ++ N IAG    P D+   A S     W  +
Sbjct: 134 PLTIVWFGLGDG----PTVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIF 189

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASI 522
             +I+PG  P  +TG   A G  W + I
Sbjct: 190 VNVIVPGSLPDILTGGRIAVGLGWMSVI 217



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 8/200 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F  ++    +  + A      +     H       P   +      +    + +    T
Sbjct: 26  AFGRKQALYRMISVAAIFGAWQLAANHYHSNFLMPSPWKTMVTFISVVHDPEVVKNLLIT 85

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L+  + +L+       L   S+ +  +L P++D ++ +PI+ ++  T+V+F     
Sbjct: 86  LKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTIVWFGLGDG 145

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                     +F I  + V+ +  +    + NIP+D    +RS     W  F  + VP S
Sbjct: 146 P--------TVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNVIVPGS 197

Query: 189 MPGLVWNMMMSMSGGWFFVV 208
           +P ++    +++  GW  V+
Sbjct: 198 LPDILTGGRIAVGLGWMSVI 217


>gi|291618547|ref|YP_003521289.1| ProW [Pantoea ananatis LMG 20103]
 gi|291153577|gb|ADD78161.1| ProW [Pantoea ananatis LMG 20103]
          Length = 388

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   I    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 140 PVAIALFALIAWQIASPAMGIATL-ISLIAIGAIGAWSQAMITLALVLTALLFCIIIGLP 198

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 199 MGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 251

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E S SF  S  Q  + + +P +MP ++  +  ++     
Sbjct: 252 -LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 310

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 356



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +        +   P+   +    + L  +          L + Q  S  + I     + 
Sbjct: 108 VVNHFRPVFQSIRVPVDYILSAFQQLLLGMPAPVAIALFALIAWQIASPAMGIATLISLI 167

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +    AW                       IT+  V+  ++   II +P+GIW+     
Sbjct: 168 AIGAIGAWS-------------------QAMITLALVLTALLFCIIIGLPMGIWLARSER 208

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +  ++P    +   PA V+   +V          N+   ++ I      I+   I G  
Sbjct: 209 AARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIK 264

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E + SF  +  +    + LP   P  + G       A +  +++ + + G   
Sbjct: 265 QVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG--- 321

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +     +       +G + +    + L+R 
Sbjct: 322 ----GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 356


>gi|114328963|ref|YP_746120.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114317137|gb|ABI63197.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 276

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 107/282 (37%), Gaps = 23/282 (8%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ- 362
           +    L  ++  +    G +      +  +         +L   W+     +A   ++  
Sbjct: 3   DLSVSLPVSLPAIRSHGGRLSLGLSGHVGRFLLGMGGLGILLAVWWLFTGPLAGAGSFSR 62

Query: 363 ------SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                 ++  ++    + D+L  +WL   ++ RV+V + +A  + +P+G+ +G    + +
Sbjct: 63  RFAPGLALTSLIEMGWHGDLLTHVWL---SLKRVLVGLAVALAVGVPLGLAVGSVRVVEA 119

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
              P  Q L       + P+ V  +          +  L+ F   W IL +   G     
Sbjct: 120 ATSPVFQFLRMISPLSWMPVAVMVLGVGDA----PIYFLLSFAAVWPILLSTADGVKQLD 175

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             +  +A S   T W     I+LPG+    +TG   A G  W   + +E+          
Sbjct: 176 RRWLLLAQSLAATRWETLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLG------VA 229

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWH 575
            GLG  + ++ ++ ++ E+   VL++      L+   R L+ 
Sbjct: 230 GGLGYLVLDTRDRMAYGELTAVVLVIGLLGFLLDAIARLLYR 271



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 14/198 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+L  + ++L             R +     P+   ++ I  L ++  
Sbjct: 80  GDLLTHVWLSLKRVLVGLAVALAVGVPLGLAVGSVRVVEAATSPVFQFLRMISPLSWMPV 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+             +    F +  + VW +  S    +  + R    +++S   + W+
Sbjct: 140 AVMVLGVG--------DAPIYFLLSFAAVWPILLSTADGVKQLDRRWLLLAQSLAATRWE 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P  +  ++  + +++   W  +V +EM+ V        G+G  +         
Sbjct: 192 TLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLGVAG------GLGYLVLDTRDRMAY 245

Query: 239 LAILYAMLTMLGVIFLYD 256
             +   +L +  + FL D
Sbjct: 246 GELTAVVLVIGLLGFLLD 263


>gi|313496595|gb|ADR57961.1| TauC [Pseudomonas putida BIRD-1]
          Length = 279

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 21/281 (7%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P++       R    +R      ++   +   ++ +L ++W     G    +   S G I
Sbjct: 7   PVAGKHDAQTRPAATLRRPLSTRWISTLT---LASLLLVWWLVTAAGWVEPLFLPSPGDI 63

Query: 368 VNH----FTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++      T   +   +W     ++ R+ + ++ A++  IPVGI IG+       + P  
Sbjct: 64  LSKAWTLLTQGYMDASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLI 123

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V       L+      LL+       I      G           
Sbjct: 124 EFYRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRA 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 180 AQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 233

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +  + +      VVLG+L++     AL    R L   L  +
Sbjct: 234 VQSAAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274



 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 26/273 (9%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59
            P    RR     +     +  + ++  L+             P DI+      L     
Sbjct: 17  RPAATLRRPLSTRWISTLTLASLLLVWWLVTAAGWVEPLFLPSPGDILSKAWTLLTQGYM 76

Query: 60  --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             SL Q+   +  R+  A+V + L           +R    +L P+++  + IP L +L 
Sbjct: 77  DASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++            EL+ +  I+ +    +  +    +  +       ++S   +  
Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKA 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +   
Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242

Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
              ++  +L +  + F  +   + L R ++ W 
Sbjct: 243 TDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275


>gi|292489182|ref|YP_003532069.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292900299|ref|YP_003539668.1| glycine betaine/L-proline ABC transporter permease [Erwinia
           amylovora ATCC 49946]
 gi|291200147|emb|CBJ47273.1| glycine betaine/L-proline ABC transporter, permease protein
           [Erwinia amylovora ATCC 49946]
 gi|291554616|emb|CBA22278.1| Glycine betaine/L-proline ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312173341|emb|CBX81596.1| Glycine betaine/L-proline ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 387

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I    L   Q ++V   +  +V  + +        A  T   +L+A++  +
Sbjct: 134 LLGMPAPVAITVFALIAWQLSSVSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 194 IIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + +I       F  +   V  +      +    P           
Sbjct: 96  PLDSWV------TTAIDWIVSHFRPLFQGIRLPVDYILSAFQQLLLGMPAPV-------- 141

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++ +   ++  +V           +    +    V+  ++   I
Sbjct: 142 ---AITVFALIAWQLSSVSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCII 194

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356


>gi|221635657|ref|YP_002523533.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM
           5159]
 gi|221157705|gb|ACM06823.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM
           5159]
          Length = 271

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 95/236 (40%), Gaps = 13/236 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIII 396
           ++ ++  +W        +G   +            ++     L      +  RV V + +
Sbjct: 17  IALLVLFWWAATSFLPPVGAFARRFAPEFALRALGELAASGLLWPHLVASAQRVGVGLAL 76

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           ++++ IP+G+ IG  P I+  + P  QL+       + PL +        +    +  L+
Sbjct: 77  SALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPLALLVFGAGSRS----VVFLI 132

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  T W I+ +   G       +  V  S   + W   R I+ PGI P  + G   A G 
Sbjct: 133 VLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWELLRTIVWPGIRPRVLGGMRLAVGV 192

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           AW   + +E+          +GLG  I ++ ++  + E++  +L++    LAL+  
Sbjct: 193 AWIVLVPAEMLG------VDSGLGYAILDARDRLDYGELMAVLLVIGMSGLALDGL 242



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 14/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+   + +S L       +      +  +L P L +++ +  L ++  
Sbjct: 57  GLLWPHLVASAQRVGVGLALSALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPL 116

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             + +F I  + +W +  S    +  +      V RS   S W+
Sbjct: 117 ALLVFGAGSR--------SVVFLIVLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWE 168

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               +  P   P ++  M +++   W  +V +EM+ V        G+G  I  A    D 
Sbjct: 169 LLRTIVWPGIRPRVLGGMRLAVGVAWIVLVPAEMLGVDS------GLGYAILDARDRLDY 222

Query: 239 LAILYAMLTMLGVIFLYDQL 258
             ++  +L +       D L
Sbjct: 223 GELMAVLLVIGMSGLALDGL 242


>gi|121608093|ref|YP_995900.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552733|gb|ABM56882.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 255

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+   + A+++ IP+GI++G   +  +   P   LL   P+  + PL +     
Sbjct: 64  LASARRVMTGFLAATVVAIPLGIFLGMSRYARAAFDPILSLLRPLPSMSWIPLSLLWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++  G     L  VI             A +   + W+  R ++LPG  
Sbjct: 124 TETQKYS----IVFMGCFAPALVYVIEATRNVDPVLIRAAQNLGASRWQVMREVVLPGSL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G     G AW   I +E+ +         GLG  I    E      VVLG++++ 
Sbjct: 180 PQILSGLKIILGLAWTCVISAELVA------AREGLGFLIMNGKEFFQTEVVVLGMVMIS 233

Query: 564 CFVLALN---RFLWHPLYLY 580
             VL  +   R +   L  +
Sbjct: 234 LTVLLTDVVFRAIGRKLLRW 253



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +           +LP +   +  R+++  + + +           SR       
Sbjct: 40  LPPPSAVWARGLAMASDGALPGHVLASARRVMTGFLAATVVAIPLGIFLGMSRYARAAFD 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PIL +++ +P + ++  ++++F      K           +F          + ++  N+
Sbjct: 100 PILSLLRPLPSMSWIPLSLLWFGITETQKYS--------IVFMGCFAPALVYVIEATRNV 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L   +++   S WQ    + +P S+P ++  + + +   W  V+++E++        
Sbjct: 152 DPVLIRAAQNLGASRWQVMREVVLPGSLPQILSGLKIILGLAWTCVISAELVA------A 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             G+G  I    +      ++  M+ +   + L D   + + R ++ W  
Sbjct: 206 REGLGFLIMNGKEFFQTEVVVLGMVMISLTVLLTDVVFRAIGRKLLRWQP 255


>gi|260467171|ref|ZP_05813348.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259029024|gb|EEW30323.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 286

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 20/263 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           + +  P       S + VS +  +    +    A       +        +   + VI  
Sbjct: 22  VPWSRPSPKRTGVSARIVSAVTILAVLALWALSARLQLVSPVFLPSPLAVWNKFIVVIRD 81

Query: 383 GCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           G +          ++ RV   +I A ++ +PVG+ IG          P  + L   P   
Sbjct: 82  GFVDATLAQHAVASLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PLV+        +  L +++ M+      +  +  +G      +    A S   T  +
Sbjct: 142 YLPLVIIWFGIGEPSKILVITIAMLA----PVALSTASGVRGVSQERINAARSLGATHAQ 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ILP   P  +TG   A G  W+  + +E+ +       T GLG  I  + +    
Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
             VV+G+L++      L   +  
Sbjct: 252 DVVVMGILVIAAIAFVLEFTIRR 274



 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 92/214 (42%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A  +  R+ +A++ ++L           S     +  P+L+ ++ IP L +L  
Sbjct: 86  ATLAQHAVASLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P K        I  I  + +  +  S    +  + ++    +RS   +  Q
Sbjct: 146 VIIWFGIGEPSK--------ILVITIAMLAPVALSTASGVRGVSQERINAARSLGATHAQ 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + +++  GW  +VA+E++          G+G  I  A +    
Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             ++  +L +  + F+     + + R  + W+ +
Sbjct: 252 DVVVMGILVIAAIAFVLEFTIRRIERVFVPWAGR 285


>gi|170724138|ref|YP_001751826.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762141|gb|ACA75457.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 279

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + ++ A++  IPVGI IG+       + P  +     P   + PL+V     
Sbjct: 85  GASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      LL+       I      G           A S   T  +  R++ILP   
Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPARLRAAQSLGATKVQLIRHVILPSAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254

Query: 564 CFVLALN---RFLWHPLYLY 580
               AL    R L   L  +
Sbjct: 255 LIAFALEMGLRALQRKLVPW 274



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 102/273 (37%), Gaps = 26/273 (9%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59
            P   +RR     +     +  + ++  L+             P DI+      L     
Sbjct: 17  RPVEKARRQLATRWISTLTLASLLLVWWLVTAAGWIEPLFLPAPGDILAKAWSLLTQGYM 76

Query: 60  --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             SL Q+   +  R+  A+V + L           +R    +L P+++  + IP L +L 
Sbjct: 77  DASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++            EL+ +  I+ +    +  +    +  +       ++S   +  
Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPARLRAAQSLGATKV 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +   
Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242

Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
              ++  +L +  + F  +   + L R ++ W 
Sbjct: 243 TDVVVLGILLIALIAFALEMGLRALQRKLVPWH 275


>gi|11498247|ref|NP_069473.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649975|gb|AAB90597.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 248

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 107/243 (44%), Gaps = 16/243 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDI------VPITLDVHSLPQYASRTTLRMLSAMVIS 79
             V+     L+  + +   P ++ ++       P  +   +L Q+A  +  R+L+A  ++
Sbjct: 6   AFVLIFSWYLISALTDLPHPHEVAEVFFTLLVNPEPVLGKTLVQHAVASLFRVLAASFLA 65

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                    ++  +R L   + P ++ ++ IP L ++    + F  L        E++ I
Sbjct: 66  FSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPLAYIIFAPL----PNTVEVSQI 121

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +F    +    S++    N+P +L E++  F+         + VP S+ G++  + + 
Sbjct: 122 FIVFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERLIITDIVVPHSLQGIMSGVRIG 181

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQL 258
           +  GW  ++A+EMI          G+G +I +        A + A + M+G+I ++ + L
Sbjct: 182 LGVGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGRTAEIVAGMAMIGIIGYMMNWL 236

Query: 259 LFR 261
           L R
Sbjct: 237 LLR 239



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 86/241 (35%), Gaps = 9/241 (3%)

Query: 339 RVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           + +++L   W+ +     +       +    ++ +        ++     ++FRV+    
Sbjct: 4   KGAFVLIFSWYLISALTDLPHPHEVAEVFFTLLVNPEPVLGKTLVQHAVASLFRVLAASF 63

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  I +P+GI  G+   +   I P  + L   P   + PL     +       +    +
Sbjct: 64  LAFSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPLAYIIFAPLPNTVEVSQIFI 123

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  +    +V   A   P +  E+A  F          I++P      ++G     G
Sbjct: 124 VFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERLIITDIVVPHSLQGIMSGVRIGLG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK-GSFPEVVLGVLIMCCFVLALNRFLW 574
             W + I +E+ +         GLG +I       G   E+V G+ ++      +N  L 
Sbjct: 184 VGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGRTAEIVAGMAMIGIIGYMMNWLLL 238

Query: 575 H 575
            
Sbjct: 239 R 239


>gi|324114593|gb|EGC08561.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 275

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
             R  +P +     S   ++ ++ I+W    C +   +      Q +  +V     Q  +
Sbjct: 13  RWRLRWPLSRQLTLSFSVLAVLVTIWWAVTACQLISPLFLPPPQQVLAKLVTIAGAQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     +M R+++ +I A +I IP G+ +G  P I   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V         P + L  L IF     +  + +AG  +        A S      +   
Sbjct: 133 LMVIWFGIGE-TPKVLLIWLAIFA---PLAMSALAGVQSVQQVRIRAAQSLGANRVQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 YVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAVIAFLLELSLRALQRRLTPW 270



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 93/216 (43%), Gaps = 17/216 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+L A++ +++           S  +  +L PI+++ + +P L +L  
Sbjct: 74  ATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPL 133

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F      KV+   LA            +  S    + ++ +     ++S   +  Q
Sbjct: 134 MVIWFGIGETPKVLLIWLAIFA--------PLAMSALAGVQSVQQVRIRAAQSLGANRVQ 185

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             WY+ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 186 VLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             +L  +  +  + FL +   + L R +  W  + +
Sbjct: 240 DVVLAGIAVIAVIAFLLELSLRALQRRLTPWHGEVK 275


>gi|228946522|ref|ZP_04108837.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228813135|gb|EEM59441.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 282

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  NV  G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNVFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPATLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  +++  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNVFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPATLPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280


>gi|307946988|ref|ZP_07662323.1| glycine betaine/proline ABC transporter, permease protein
           [Roseibium sp. TrichSKD4]
 gi|307770652|gb|EFO29878.1| glycine betaine/proline ABC transporter, permease protein
           [Roseibium sp. TrichSKD4]
          Length = 660

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 73/485 (15%), Positives = 155/485 (31%), Gaps = 34/485 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A +T   ++ +  ++ L        A K R    ++ PIL ++Q++P   +L   V+
Sbjct: 146 WKMAMQTMSVIVVSAPLAFLMGLTLGVAAWKYRWFERMMKPILSVLQTLPFFTYLLPAVI 205

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G   GA     FAI       M       L  +  ++ E       + WQ   
Sbjct: 206 FFKV---GPTAGAVATITFAIP-----PMILMTTLGLKKVSPEVIEAGHMSGCTRWQMLS 257

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ VP +   ++  +          ++    +VV    I +PG+G+ +   +    L   
Sbjct: 258 HVYVPAARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRS 310

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV-LYLFRKTNFLRFIGY 300
               +T++ +  + D++    ++     F            S + L LF     L  +  
Sbjct: 311 FEIGVTIVLLAVMLDRMSKAWVVKQPVHFERGTPWWKRHQVSLIALVLFIGFTLLSQVFP 370

Query: 301 SSWNFFSP------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
                               + + +             +  N   L   +     +    
Sbjct: 371 ILAEVGRKQHLSQGKEIDVVIKSFLAIDAIKGTTEWLRWFLNVKVLIPFRNTLLAIPTPA 430

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGI 406
           F ++              I     +  V +  W     IT++ V+  + +A+II IP+G+
Sbjct: 431 FILLVVSFSYWVGGRRPGIYAAVFFTVVAFSGWWDRSVITLYTVISAVALAAIIGIPLGV 490

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                   S  I         FP+ ++    +          ++ +   ++      ++ 
Sbjct: 491 VAARSSRWSKSILLACDTAQTFPSFIYLIPAIMLFGV----NDVAVVFSILIFAAVPLIR 546

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             I G S+ P +  E A     T  +    +  P   P    G   A   ++   I++  
Sbjct: 547 YTIIGLSSVPPEMTEAADMSGSTRRQKLMSVQFPLALPTMAVGFNQAIMFSFFMVIIAAF 606

Query: 527 ASWGH 531
                
Sbjct: 607 IGTQD 611



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++SA+ ++ +       +AA+S R    ++   D  Q+ P   +L   ++ F    
Sbjct: 470 TLYTVISAVALAAIIGIPLGVVAARSSRWSKSILLACDTAQTFPSFIYLIPAIMLFGVN- 528

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  ++A +F+I       +       L ++P ++ E +     +  QK   +  P 
Sbjct: 529 -------DVAVVFSILIFAAVPLIRYTIIGLSSVPPEMTEAADMSGSTRRQKLMSVQFPL 581

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +      ++   +F V+ +  I   D       +G  +   +   +L       L 
Sbjct: 582 ALPTMAVGFNQAIMFSFFMVIIAAFIGTQD-------LGQELQRTLAGTELGKNFVLGLN 634

Query: 248 MLGVIFLYD 256
           +  +   +D
Sbjct: 635 VSLMALTFD 643


>gi|313894146|ref|ZP_07827711.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313440970|gb|EFR59397.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 250

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++  L       + G    +       ++          +      ++ R  +  II+ +
Sbjct: 12  IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G+ +G+   I + I P  Q++       + P +V               +++   
Sbjct: 72  AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L + ++        + +VA +F I        I+LP +FP   +G   A G AW 
Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +  E+          TGLG  I +         +++ +L +    L L+
Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +A  L+  +I  L          P  ++      +    L +  + + +R     +IS+
Sbjct: 11  FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +  +    + +   + PI+ +++ I  + +L F V++F           +  AI 
Sbjct: 71  VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  + +  S   ++ NI     +V+R+F +   +  + + +P   PG+   + +++
Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              W F+V  EM+          G+G  I           ++ A+LT+  V  L D 
Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233


>gi|270264393|ref|ZP_06192659.1| transporter [Serratia odorifera 4Rx13]
 gi|270041529|gb|EFA14627.1| transporter [Serratia odorifera 4Rx13]
          Length = 278

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++V ++ A II +PVGI +G    +   + P  ++    P   + PL+V     
Sbjct: 84  AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A +     W+  R+++LP   
Sbjct: 144 GETSK----ILLIYLAIFAPVALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSAL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 200 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIA 253

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 254 IIAFGLELGLRALQRRLTPW 273



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 105/254 (41%), Gaps = 22/254 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYASRTTLRMLSAM 76
           L+A  +  G+  + L        P+ ++  + +          +L Q+ + +  R+L A+
Sbjct: 35  LVALAVWWGVTALNLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILVAL 94

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + +++           +  +  +L P+++I + +P L +L   V++F           E 
Sbjct: 95  LAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ET 146

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +  S    + ++ +     +R+   + WQ   ++ +P ++P ++  +
Sbjct: 147 SKILLIYLAIFAPVALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSALPEILTGI 206

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F  +
Sbjct: 207 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIAIIAFGLE 260

Query: 257 ---QLLFRPMIVWS 267
              + L R +  W 
Sbjct: 261 LGLRALQRRLTPWH 274


>gi|221068270|ref|ZP_03544375.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220713293|gb|EED68661.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 414

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   A  T   +L+++   +        L A S        P LD MQ+ P   +L   
Sbjct: 183 GIWSEAMVTLALVLTSLFFCIAIGLPVGILLASSDLAQRWTRPFLDAMQTTPAFVYLVPV 242

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F     G V G  +  +FA     +  +       +  +  DL E SR++  S  Q 
Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+ 
Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D++
Sbjct: 348 LATVGGLGIVLLAIVLDRI 366



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +           +P+   +  +   L  I        + L + Q     L I     + 
Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVALL 177

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VA+   W                       +T+  V+  +     I +PVGI +     
Sbjct: 178 CVALLGIWS-------------------EAMVTLALVLTSLFFCIAIGLPVGILLASSDL 218

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
                +PF   +   PA V+   VV          N+   ++ I      ++     G  
Sbjct: 219 AQRWTRPFLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  E + ++  +  +    + LP   P  + G   A   + +  +++ + + G   
Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +     +       +G L +    + L+R 
Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366


>gi|206579848|ref|YP_002240248.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|290509981|ref|ZP_06549351.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|206568906|gb|ACI10682.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|289776697|gb|EFD84695.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 247

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++ RV V + +A I+ IP G+ +G          P  Q L       + P+
Sbjct: 52  GELVRNIAISLSRVAVGLGLALIVGIPCGLLMGCSAASERLAMPALQFLRMISPLSWMPV 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +          +  L+ F   W +L N  +G    P  +  +A S   T      +
Sbjct: 112 AVMLLGIGDR----PIWFLLSFAAVWPVLLNTASGVRQLPPGWLLLARSLSATRRETLWH 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILPG+  + +TG   A G  W   +  E+         ++GLG  I ++ ++  +  ++
Sbjct: 168 IILPGVRAHILTGVRLAIGILWIVLVPCEMLG------VSSGLGYAILDARDRLDYSALM 221

Query: 557 LGVLIMCCFVLALN 570
             ++ +      ++
Sbjct: 222 AVIVTIGAIGFLMD 235



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 14/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G I     G+     P + +  +   L    L +  + +  R+   + ++L+      
Sbjct: 21  IWGAITHFAGGMAGLFAPENALRSLQEMLAQGELVRNIAISLSRVAVGLGLALIVGIPCG 80

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L   S     + +P L  ++ I  L ++   V+                  F +  + V
Sbjct: 81  LLMGCSAASERLAMPALQFLRMISPLSWMPVAVMLLGIGDRPIW--------FLLSFAAV 132

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  +    +  +P     ++RS   +  +  W++ +P     ++  + +++   W  +
Sbjct: 133 WPVLLNTASGVRQLPPGWLLLARSLSATRRETLWHIILPGVRAHILTGVRLAIGILWIVL 192

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V  EM+ V        G+G  I  A    D  A++  ++T+  + FL D L
Sbjct: 193 VPCEMLGVSS------GLGYAILDARDRLDYSALMAVIVTIGAIGFLMDWL 237


>gi|325122701|gb|ADY82224.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter calcoaceticus PHEA-2]
          Length = 279

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      ++A     S+     L P    ++SIP L
Sbjct: 72  LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ R L EV + +R
Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDRKLIEVGKVYR 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S+S  W F++A+E+I          GIG  ++   
Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWFLRWR 274



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV+   II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 79  LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISII 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238


>gi|318081537|ref|ZP_07988853.1| binding-protein-dependent transporter inner membrane component
           [Streptomyces sp. SA3_actF]
          Length = 270

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 13/211 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL
Sbjct: 70  GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             ++   +    +   + G +A      + A          +  
Sbjct: 130 AIVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLK 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P+ + GA    G +W   + +E+ +         GLG  +  +      P + 
Sbjct: 186 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 239

Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584
           +G+L +    L ++R L      L  +  R 
Sbjct: 240 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 270



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   G+ +   P  +       +   SL      +  R+L   V+ ++       L   
Sbjct: 44  VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 103

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
              +  +L P +   +++P L  +   +V        K        +F IF +       
Sbjct: 104 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 155

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q +    R L + +R         F  + +P S P L+    + +   W  +VA+E+
Sbjct: 156 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 215

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
           I          G+G  +  A    DL  I   +LT+  V  + D+LL R    +  W  +
Sbjct: 216 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 269


>gi|325673723|ref|ZP_08153414.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
 gi|325555744|gb|EGD25415.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
          Length = 272

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+   ++A+ + IP+G+ +G    +   ++    L+   P   + PL +  + Y
Sbjct: 78  AASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGY 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+     + IL N   G +  P    E A+       +    I++P   
Sbjct: 138 GDRS----TIFLIFVAAFFPILLNTTVGVAQVPQRLLEAAAMLGTPKAKTLYKIVIPSAM 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               +G   A G +W   +V E          +TGLGA I ++ +      ++ G++ + 
Sbjct: 194 QSITSGLRIALGLSWVVLVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIG 247

Query: 564 CFVLALNRFL 573
                 +RF+
Sbjct: 248 LAGFVTDRFM 257



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL ++ + +TLR+L+  +++         L  +   +   L   +++++ IP+  +   
Sbjct: 71  GSLWRHLAASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPL 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T++             + + IF IF +  + +  +    +  +P+ L E +        +
Sbjct: 131 TLLIIGYG--------DRSTIFLIFVAAFFPILLNTTVGVAQVPQRLLEAAAMLGTPKAK 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +M  +   + +++   W  +V  E + +        G+G+ I  A      
Sbjct: 183 TLYKIVIPSAMQSITSGLRIALGLSWVVLVVGETVGIST------GLGAMITQARDMSRT 236

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  M+ +    F+ D+ +
Sbjct: 237 DLIIAGMVFIGLAGFVTDRFM 257


>gi|28211936|ref|NP_782880.1| putative glycine-betaine binding permease protein [Clostridium
           tetani E88]
 gi|28204379|gb|AAO36817.1| putative glycine-betaine binding permease protein [Clostridium
           tetani E88]
          Length = 275

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 105/233 (45%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI +  +L + + +  V      +    +D   L     +T   +L + +I+LL    
Sbjct: 50  IVVIILFALLAYKLADKRVAIFTF-VGLFFIDSMQLWNQTMQTLALVLVSALIALLIGVP 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +  ++A++ +   +L PILD MQ++P   +L   V++F     GKV GA    IF++  +
Sbjct: 109 FGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGM---GKVPGAIATVIFSMPPA 165

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +P ++ E ++SF  +  Q  + + +P ++P ++  +  ++     
Sbjct: 166 -----VRLTNLGIRQVPDEVVEAAKSFGSTPKQMLYKVQLPIALPTILAGVNQTIMLALS 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV S MI  G       G+G  +   I +  +     + L ++ +  + D++
Sbjct: 221 MVVVSAMIGAG-------GLGREVYQGITQLKIGQGFESGLAVVILAMILDRM 266



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 13/230 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I  F ++             ++     + D + +      T+  V+V  +IA +I +
Sbjct: 50  IVVIILFALLAYKLADKRVAIFTFV--GLFFIDSMQLWNQTMQTLALVLVSALIALLIGV 107

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P GI        +  ++P    +   PA V+    V       +   +   +     +  
Sbjct: 108 PFGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGMGKVPGAIATVIF----SMP 163

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P++  E A SF  T  +    + LP   P  + G       A +  +
Sbjct: 164 PAVRLTNLGIRQVPDEVVEAAKSFGSTPKQMLYKVQLPIALPTILAGVNQTIMLALSMVV 223

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           VS +   G       GLG  + +   +    +     L +    + L+R 
Sbjct: 224 VSAMIGAG-------GLGREVYQGITQLKIGQGFESGLAVVILAMILDRM 266


>gi|28898501|ref|NP_798106.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153836267|ref|ZP_01988934.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ3810]
 gi|260365056|ref|ZP_05777627.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus K5030]
 gi|260879548|ref|ZP_05891903.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AN-5034]
 gi|260894977|ref|ZP_05903473.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus Peru-466]
 gi|260901013|ref|ZP_05909408.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ4037]
 gi|28806719|dbj|BAC59990.1| glycine betaine/L-proline transport system permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750542|gb|EDM61287.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ3810]
 gi|308086053|gb|EFO35748.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus Peru-466]
 gi|308093320|gb|EFO43015.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AN-5034]
 gi|308110813|gb|EFO48353.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus AQ4037]
 gi|308111687|gb|EFO49227.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio parahaemolyticus K5030]
          Length = 361

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+++   LL         A+S+     + PILD MQ+ P   +L   V+ F 
Sbjct: 139 AMTTLALVLTSVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P +L E   SF  +  Q  + + 
Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  L D++
Sbjct: 304 GLGIVILAILLDRI 317



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  +   +AWQ   + +   T   ++++  +G       T+  V+  +    +I +P+G
Sbjct: 102 IMVLILFLLAWQFSNFKLGLSTLVSLVFIGLIGAWSQAMTTLALVLTSVFFCLLIGLPMG 161

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  ++P    +   PA V+   +V          N+   ++ I      ++
Sbjct: 162 IWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVV 217

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P +  E   SF     +    I LP   P  + G       + +  +++ 
Sbjct: 218 RLTILGIQQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIAS 277

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 278 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|146309344|ref|YP_001189809.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145577545|gb|ABP87077.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 276

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 14/221 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
             +   P  +   + +      L ++ + + LR+ +   I      V  T    SRR   
Sbjct: 49  AHQMPAPSQVAQTLYLLAQSGELWRHLNASLLRVSAGFAIGAALAIVIGTWVGLSRRAEA 108

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L P    +++IP L ++   +++       K++   L A F ++         ++   +
Sbjct: 109 YLEPTFQALRAIPSLAWVPLLLLWLGIDETPKIVLIALGAFFPVY--------LALLAGI 160

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            NI R L EV R + LS       + +P ++P L   +  ++S  W F+VA+E+I     
Sbjct: 161 RNIDRKLVEVGRLYGLSSLALVRRILLPAALPSLFTGLRGALSLSWMFLVAAELIA---- 216

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G  ++   +      ++ A+L +  +  L D LL
Sbjct: 217 --ATRGLGYLLSDGRETSRPDLVIAAILLLALLGKLSDSLL 255



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     I + + I +G W+G      + ++P  Q L A P+  + PL++  +   
Sbjct: 77  ASLLRVSAGFAIGAALAIVIGTWVGLSRRAEAYLEPTFQALRAIPSLAWVPLLLLWLGI- 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L+  G  + +   ++AG         EV   + ++     R I+LP   P
Sbjct: 136 ---DETPKIVLIALGAFFPVYLALLAGIRNIDRKLVEVGRLYGLSSLALVRRILLPAALP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              TG   A   +W   + +E+ +       T GLG  +++  E
Sbjct: 193 SLFTGLRGALSLSWMFLVAAELIA------ATRGLGYLLSDGRE 230


>gi|206577481|ref|YP_002239418.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|288936268|ref|YP_003440327.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510676|ref|ZP_06550046.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp.
           1_1_55]
 gi|206566539|gb|ACI08315.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|288890977|gb|ADC59295.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289777392|gb|EFD85390.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp.
           1_1_55]
          Length = 263

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 107/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V+V  + + +     +    P  ++           L Q+ + ++ R L    I   
Sbjct: 19  VGTVIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   ++  SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ETAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++  +  ++ 
Sbjct: 131 VSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 LMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W+  + L+    
Sbjct: 245 LERLWLRWNPAYHLQEANA 263



 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 86/249 (34%), Gaps = 26/249 (10%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            +V  +A  + W S   + +         T      +     I+ +R +V   I   I +
Sbjct: 22  VIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGSIGL 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+  G        +    Q+L   P     PLV+                L+  GT +
Sbjct: 82  VLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DETAKIFLVSLGTLF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G         E+A S+ ++G+  +R++ILPG  P  + G   A G  W   I
Sbjct: 138 PIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSIMVGVRFALGLMWLTLI 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFL-- 573
           V+E  S         G+G     + E      VV+ +++              L R    
Sbjct: 198 VAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQLLERLWLR 251

Query: 574 WHPLYLYGT 582
           W+P Y    
Sbjct: 252 WNPAYHLQE 260


>gi|260173414|ref|ZP_05759826.1| putative glycine betaine transport system permease protein
           [Bacteroides sp. D2]
 gi|315921686|ref|ZP_07917926.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695561|gb|EFS32396.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 274

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      + I+ +      +      I  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYLTILALAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F        A S R   +L PILD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGL---GTVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 84/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +       IAW   G  ++ FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYLTILALAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I  +P+GIW    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGLGTVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|319794068|ref|YP_004155708.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315596531|gb|ADU37597.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 389

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 17/232 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSL--PQYASRTTLRMLSAMVISLLFTFVY 86
           + +I ++     +       +      L V  L     A  T   +L+++V  ++     
Sbjct: 124 LAMIALIGLFAWQFAGRALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPL 183

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A S R   V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    
Sbjct: 184 GVLLASSDRAQRVMRPVLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFALA--- 237

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +  DL E +R++  S WQ    + +P +MP ++  +  ++      
Sbjct: 238 --PLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSM 295

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI VG       G+G  +   I   D+       L ++ +    D+L
Sbjct: 296 VVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 340



 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 86/269 (31%), Gaps = 12/269 (4%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                L   V+        +R         +         L +     +          +
Sbjct: 84  WINQGLGWVVEHFRPFFQTVRLPIDSTLNWVQGLLTGLPTLAMIALIGLFAWQFAGRALA 143

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           IG  V       +L +     +T+  V+  ++   +I +P+G+ +         ++P   
Sbjct: 144 IGTTVALLLVA-MLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSDRAQRVMRPVLD 202

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   PA V+   VV          N+   ++ I      ++     G      D  E A
Sbjct: 203 AMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAA 258

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+    + LP   P  + G   A   + +  +++ + + G       GLG  +
Sbjct: 259 RAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMV 311

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +       +G L +    ++L+R 
Sbjct: 312 LRGIGRLDMGLATVGGLGIVLLAISLDRL 340


>gi|260596732|ref|YP_003209303.1| taurine transport system permease tauC [Cronobacter turicensis
           z3032]
 gi|260215909|emb|CBA28473.1| Taurine transport system permease protein tauC [Cronobacter
           turicensis z3032]
          Length = 230

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  ++ A++I IPVGI +G  P + + + P  +L    P   + PL+V     
Sbjct: 36  GASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGI 95

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   + W+   Y+ILPG  
Sbjct: 96  GETSK----VLLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRWQLLWYVILPGAL 151

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 152 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 205

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 206 LVAFILELGLRALTRRLTPW 225



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L  +   +  RML+A++ + L           +  L  +L P++++ + IP 
Sbjct: 23  PQGFMDATLWAHLGASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPP 82

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F      KV+   LA    +  S +          + +  +     ++S 
Sbjct: 83  LAYLPLMVIWFGIGETSKVLLIYLAIFAPVAMSAL--------AGVKSAQQVRIRAAQSL 134

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S WQ  WY+ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 135 GASRWQLLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 188

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  +  +  V F+ +   + L R +  W 
Sbjct: 189 GEFLATDVVLAGIAVIALVAFILELGLRALTRRLTPWH 226


>gi|254502512|ref|ZP_05114663.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222438583|gb|EEE45262.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 278

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ ++  +++ +   T       +    +    + +   RT   +    +++++    
Sbjct: 44  PIILAVLVGIVYLMSRNTKITIGSLVALCVIGYLGMWEDTMRTIAMVTVCTMMAIVLGIP 103

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S R+  ++ P+LD+MQ++P   +L   V+ F     GKV G     I+AI   
Sbjct: 104 LGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMIFGL---GKVPGMIAVVIYAIP-- 158

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       +  +  D+ E + +F  S WQK   + +P ++P ++  +  ++     
Sbjct: 159 ---PMIRLTNLGIRLVDTDVLEAADAFGSSSWQKLTNVQLPLALPTIMAGVNQTIMMALA 215

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + +I V        G+G  +  AI  Q L   +   L ++ +  ++D+
Sbjct: 216 MVVVAALIGV-------KGLGQPVLNAIANQYLTMGVMNGLAIVAIAIIFDR 260



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 11/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V V  ++A ++ IP+GI +     I S I P   L+   P+ V+   VV       
Sbjct: 86  TIAMVTVCTMMAIVLGIPLGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMIFGLGK 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   + + +  I      ++     G      D  E A +F  + W+    + LP   P 
Sbjct: 146 VPGMIAVVIYAIP----PMIRLTNLGIRLVDTDVLEAADAFGSSSWQKLTNVQLPLALPT 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A    +V+ +           GLG  +  +         V+  L +   
Sbjct: 202 IMAGVNQTIMMALAMVVVAALIG-------VKGLGQPVLNAIANQYLTMGVMNGLAIVAI 254

Query: 566 VLALNR 571
            +  +R
Sbjct: 255 AIIFDR 260


>gi|299769519|ref|YP_003731545.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter sp. DR1]
 gi|298699607|gb|ADI90172.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter sp. DR1]
          Length = 279

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      V+A     S+     L P    ++SIP L
Sbjct: 72  LDLAHSDLFAHIYISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ R L EV + +R
Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDRKLIEVGKVYR 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S+S  W F++A+E+I          GIG  ++   
Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 238 ETSRPDIVIIAIILLALLGKVTDTLM-KLIENWLLRWR 274



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV++  II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 79  LFAHIYISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISII 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238


>gi|318058231|ref|ZP_07976954.1| binding-protein-dependent transporter inner membrane component
           [Streptomyces sp. SA3_actG]
          Length = 271

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 95/270 (35%), Gaps = 22/270 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ---------DVL 377
            P         +R+     +    +V G+ +     + G +     +             
Sbjct: 12  VPAKGPAPRRARRLPPAPLLNLLALVLGLGVWWVLAATGLVDVPGPWPVARRAGEMIADG 71

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL 
Sbjct: 72  SLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLA 131

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             ++   +    +   + G +A      + A          +  +
Sbjct: 132 IVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKV 187

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P+ + GA    G +W   + +E+ +         GLG  +  +      P + +
Sbjct: 188 VIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFV 241

Query: 558 GVLIMCCFVLALNRFLWHP---LYLYGTRC 584
           G+L +    L ++R L      L  +  R 
Sbjct: 242 GLLTIGVVGLVMDRLLLRAERHLTSWQERR 271



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   G+ +   P  +       +   SL      +  R+L   V+ ++       L   
Sbjct: 45  VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 104

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
              +  +L P +   +++P L  +   +V        K        +F IF +       
Sbjct: 105 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 156

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q +    R L + +R         F  + +P S P L+    + +   W  +VA+E+
Sbjct: 157 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 216

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
           I          G+G  +  A    DL  I   +LT+  V  + D+LL R    +  W  +
Sbjct: 217 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 270


>gi|311112824|ref|YP_003984046.1| nitrate/sulfonate/bicarbonate ABC transporter membrane protein
           [Rothia dentocariosa ATCC 17931]
 gi|310944318|gb|ADP40612.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Rothia dentocariosa ATCC
           17931]
          Length = 317

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 94/254 (37%), Gaps = 16/254 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY------IVNHFTYQDVLYV 379
               +  +    + V  +L +    +  G++    + ++        I   F       +
Sbjct: 60  RVNTSVKRFSPKKLVGLLLPVALIALWYGLSTAGVFTAVQLPSPTKVIAAGFELAQRGDL 119

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +    I+  RV++  +I +++ + +G  IG          P    L A P+  + PL++ 
Sbjct: 120 LTHVAISTQRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLL 179

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V     +       L+  G  + +   V A  +       E A +F + G R +  + L
Sbjct: 180 WVGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDVKLVEAARAFGLKGIRLFTTVQL 235

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P  V+G   A   AW   + +E+         + GLG  + +S   G    ++L +
Sbjct: 236 PAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLTDSQNNGRTDRLLLSI 289

Query: 560 LIMCCFVLALNRFL 573
           +++       +  +
Sbjct: 290 VLLAILGKLTDALI 303



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 104/250 (41%), Gaps = 14/250 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F  +++   +  +    L  G+    +    +   P  ++           L  + + +T
Sbjct: 68  FSPKKLVGLLLPVALIALWYGLSTAGVFTAVQLPSPTKVIAAGFELAQRGDLLTHVAIST 127

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+L   +I  +   V   L   S    +V  P +  ++++P L ++   +++       
Sbjct: 128 QRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLLWVGIGENS 187

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV    + A F ++T+        +  +L ++   L E +R+F L G + F  + +P  +
Sbjct: 188 KVTLVAIGAFFPVYTT--------VSAALAHVDVKLVEAARAFGLKGIRLFTTVQLPAVL 239

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +V  + ++++  W F+VA+E++          G+G  +  +        +L +++ + 
Sbjct: 240 PSVVSGLRLALAQAWLFLVAAELLGAS------MGLGYLLTDSQNNGRTDRLLLSIVLLA 293

Query: 250 GVIFLYDQLL 259
            +  L D L+
Sbjct: 294 ILGKLTDALI 303


>gi|327440575|dbj|BAK16940.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 270

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I     I L    LP +   +  R++   ++  L   +       S+    ++ 
Sbjct: 51  LPTPLKIASTFWILLANGELPVHFLASGQRVIFGFLLGALTAIILGIATGFSKIAQQLID 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +++++P+L  +   +++F     GKV+   L A F ++         +++  +  +
Sbjct: 111 PSLQMLRTVPLLSLIPLFILWFGVGEFGKVLMIALGAFFPVYV--------NIFLGIRLV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L EV+   + S  +K   L  P +MP L+  + ++M   W  +V SEM+        
Sbjct: 163 DQKLYEVTGILQYSFKEKLTKLIFPSAMPNLLLGLRLAMGTSWLVLVVSEMMGASA---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG  I  A        +   ++  + +    D L   + +  + W + ++
Sbjct: 219 --GIGYMIQDARAYSQTDIVFVGLILFIILGKFTDSLVGSIEKRALKWRDTYK 269



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+   ++ ++  I +GI  GF       I P  Q+L   P     PL +     
Sbjct: 75  LASGQRVIFGFLLGALTAIILGIATGFSKIAQQLIDPSLQMLRTVPLLSLIPLFILWFGV 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     L++  G  + +  N+  G         EV      +       +I P   
Sbjct: 135 G----EFGKVLMIALGAFFPVYVNIFLGIRLVDQKLYEVTGILQYSFKEKLTKLIFPSAM 190

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G +W   +VSE+         + G+G  I ++        V +G+++  
Sbjct: 191 PNLLLGLRLAMGTSWLVLVVSEMMG------ASAGIGYMIQDARAYSQTDIVFVGLILFI 244

Query: 564 CFVLALNRFL 573
                 +  +
Sbjct: 245 ILGKFTDSLV 254


>gi|302555889|ref|ZP_07308231.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces viridochromogenes DSM 40736]
 gi|302473507|gb|EFL36600.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces viridochromogenes DSM 40736]
          Length = 667

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 76/520 (14%), Positives = 157/520 (30%), Gaps = 50/520 (9%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           F+  ++    + R  P     L  V + G ++  +   +   +           L +  L
Sbjct: 101 FVQELISQPGAGRPVP-QIGWLGVVGIAGYLSWAVGNWRVALLAVAGFTF----LGLQGL 155

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q +  T    +SA+ ++LLF       A  S R   ++ P LD MQ++P   +L    +
Sbjct: 156 WQESMDTLALTVSAVFVALLFAIPLGVWAGLSDRFHRIVTPFLDFMQTMPTFVYLAPLTL 215

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+       I   + A                  ++ ++P    E + S   +  Q   
Sbjct: 216 FFLIGPASATIATAIYAAPPAIRI--------TAHAIRSVPETTVEAADSLGATRRQALL 267

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+   
Sbjct: 268 KVLLPMSRRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 320

Query: 242 LYAMLTMLGVIFLYDQL-------------LFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
             A L ++ +  + D++                P++ W       +        + VL  
Sbjct: 321 FNAGLAIVVMAIVLDRVTTAASARADTARGSGSPLLKWR-----RQLLAAGGVAALVLVY 375

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNV--------KKLCRTLGVIRFHFPENFLQLCSNQRV 340
              T              S ++             L       R       L        
Sbjct: 376 LSHTYVWAAEFPGEGATGSSIAKTAADVTTWAQDNLSGLTNAFRDALTNALLNPFQALLT 435

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
                +    +V   A+   W++               V      T+    V  ++  ++
Sbjct: 436 DSPWWLVGAALVAVGAVLGGWRAGATTAVCVGLLVATGVWSDAMTTLASTAVATVLVMLL 495

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +G+W+G    +   ++P        P  V+    ++          +   +      
Sbjct: 496 GVVLGVWMGRSALVDRLLRPSLDAAQVMPPFVYLVPFLALFGATRFTAIVAAVVYAAPVA 555

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
              I      G  A P    E A+S     W+    + LP
Sbjct: 556 IKII----ADGVRAVPATTVEAATSTGCNTWQIITKVQLP 591


>gi|145295416|ref|YP_001138237.1| hypothetical protein cgR_1353 [Corynebacterium glutamicum R]
 gi|140845336|dbj|BAF54335.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 260

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV++  ++A+II +PVG  +G    I   + P  Q+L       + PL +
Sbjct: 66  IFWHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGL 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +     +       +++    W IL N I         +  +A +     W    YI 
Sbjct: 126 ALLK----DAENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIYIW 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   +   AW   +V+E+   G       G+G ++  +  +     +V+ 
Sbjct: 182 LPASLPGIITGLRLSLSTAWLVIVVAEMLVGG------RGIGFFVWNAWNRLDIDAIVVA 235

Query: 559 VLIMCCFVLALNRFL 573
           ++I+    L L+  +
Sbjct: 236 IVIIGITGLILDHLI 250



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+L   +++ +       L  +S  +   + P++ +++ +  L +L   +  
Sbjct: 68  WHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGLAL 127

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +        AE  A+F I  S +W +  +   ++ N+      ++ +     W +  Y
Sbjct: 128 LKD--------AENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIY 179

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+PG++  + +S+S  W  +V +EM+V G       GIG ++  A    D+ AI+
Sbjct: 180 IWLPASLPGIITGLRLSLSTAWLVIVVAEMLVGG------RGIGFFVWNAWNRLDIDAIV 233

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++ +     + D L+
Sbjct: 234 VAIVIIGITGLILDHLI 250


>gi|126731790|ref|ZP_01747594.1| ABC transporter permease protein [Sagittula stellata E-37]
 gi|126707617|gb|EBA06679.1| ABC transporter permease protein [Sagittula stellata E-37]
          Length = 645

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 86/558 (15%), Positives = 179/558 (32%), Gaps = 42/558 (7%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V G+   L +G     +   +         V  L + A  T   +   +V+         
Sbjct: 102 VTGVAVFLTYGASGRGLAI-LTAATLAYFAVFGLWEDAMLTVASVAFIVVVGFAIGLALG 160

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           TL  +  RL  V  PI D+MQ++PI  +L   V+              L+A+       +
Sbjct: 161 TLIWRHPRLETVFSPIFDVMQTLPIFSYLVPVVLLVG--------FGPLSAVIVTLVFSL 212

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             M  +   +L  +P ++ E+      S  Q    + +P +  GL+  +   +      V
Sbjct: 213 PPMARATVLALRQVPPEIRELGDMTGASQGQYILKMLIPSAKTGLMIGLNQLIMTTLAMV 272

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           + + MI  G       G+G  +  +++       L + L +  +  +  +       +  
Sbjct: 273 ILASMIGAG-------GLGGEVLQSLQILRFGRGLESGLAITLLAIVLYRYGS---ALAH 322

Query: 268 NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR--------- 318
            + R + T+ +    + V  L    +    +   +  +   L+   + L           
Sbjct: 323 RRPRHDATSTLGRDLAIVGALIALPSLAGLLWPVAQRYPEALTITSEPLWSGAIDFVNLH 382

Query: 319 ---TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
               L  +R     N L       +          +          +             
Sbjct: 383 SGEKLEALRVFLSLNLLIPLRGAIMGMGWASVALALCLVGWAASGPRLAIASAAVIAIIA 442

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                    IT+  V+V +++   I +P GIW        S I     L+   P+ V+  
Sbjct: 443 ATGYWERAVITVHLVLVGVLLGIAIGVPFGIWSALSRRAKSVIDVAVDLIQTLPSLVYLV 502

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            +V  +    ++  L ++  ++     Y          + P+   E   S   T  + +R
Sbjct: 503 PIVMLLGPGDVSAVLAIAAYVVGAVIRY----CDHALRSAPDSLIEAVRSTGATEAQVFR 558

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  + G   A     +  +V+ +         T GL      +  +      
Sbjct: 559 IVRLPFAVPGLLLGLNQAIMLGISMVVVTALVG-------TRGLEQETITALARVDPGRG 611

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++   ++C   + ++R L
Sbjct: 612 LVAGAMVCLIAITIDRLL 629



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 93/311 (29%), Gaps = 48/311 (15%)

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           RP+I W+ +F       +    S +                +  +  P +   + L   +
Sbjct: 53  RPLIAWTREFSAYVNIPLEFLQSLL----------------TKGWLIPGATAAETL--RI 94

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             + +          +       L I     +   A+   W+                  
Sbjct: 95  PSLSWLSVTGVAVFLTYGASGRGLAILTAATLAYFAVFGLWED----------------- 137

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+  V  ++++   I + +G  I   P + +   P   ++   P   +   VV  
Sbjct: 138 --AMLTVASVAFIVVVGFAIGLALGTLIWRHPRLETVFSPIFDVMQTLPIFSYLVPVVLL 195

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V +  L+  +   +     +   +    +      P + +E+      +  ++   +++P
Sbjct: 196 VGFGPLSAVIVTLVF----SLPPMARATVLALRQVPPEIRELGDMTGASQGQYILKMLIP 251

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                 + G            I++ +   G       GLG  + +S +   F   +   L
Sbjct: 252 SAKTGLMIGLNQLIMTTLAMVILASMIGAG-------GLGGEVLQSLQILRFGRGLESGL 304

Query: 561 IMCCFVLALNR 571
            +    + L R
Sbjct: 305 AITLLAIVLYR 315


>gi|152981359|ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281436|gb|ABR89846.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 296

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA +  + +   L         P   +      L    L  + S +  R+ S   I  + 
Sbjct: 55  LAVLGFVEVAAQLGWIQARLLPPPSEIVQTLSALLEQGLLVHISASVARVFSGYAIGAVL 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++      S+       P    +++IP L ++   +++F      K        I  I
Sbjct: 115 AILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLLLLWFGIDETPK--------ITLI 166

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +   +   + N+ R L E+   + LS       + +P ++P L   +   +S 
Sbjct: 167 AIGAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLSL 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W F+VA+E+I          GIG  +    +      +L A+  +  +  L D LL
Sbjct: 227 AWMFLVAAELIA------ATKGIGYLLTDGRETSRPDVVLAAIFLLAILGKLTDGLL 277



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 18/249 (7%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLY------VIWLGC 384
            +   +++ ++  I    V+  V +   + W     +         L       ++    
Sbjct: 39  PVAKARKLGWLGWILPLAVLGFVEVAAQLGWIQARLLPPPSEIVQTLSALLEQGLLVHIS 98

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     I +++ I  G+++G   H  +  +P  Q L A P+  + PL++      
Sbjct: 99  ASVARVFSGYAIGAVLAILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLLLLWFGI- 157

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + I   +++G         E+   + ++     R I+LP   P
Sbjct: 158 ---DETPKITLIAIGAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALP 214

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       AW   + +E+ +       T G+G  + +  E      V+  + ++  
Sbjct: 215 SLFTGLRNGLSLAWMFLVAAELIA------ATKGIGYLLTDGRETSRPDVVLAAIFLLAI 268

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 269 LGKLTDGLL 277


>gi|117619242|ref|YP_857864.1| glycine betaine/L-proline ABC transporter, permease protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117560649|gb|ABK37597.1| glycine betaine/L-proline ABC transporter, permease protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 383

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 16/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+IG++ ++   +    +    +  + +   + +    A  T   +L+++   +L     
Sbjct: 127 LMIGLLTLIAWQLVNGRMALGTLFSLVVVGLIGA-WSDAMVTLSLVLTSLFFCVLIGLPV 185

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A+S RL     P+LD MQ+ P   +L   V+ F     G V G  +  IFA     
Sbjct: 186 GILLARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTVIFA----- 237

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  M       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++      
Sbjct: 238 LPPMIRLTMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSM 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI VG       G+G  +   I   D+       L ++ +  + D+L
Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 22/285 (7%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F + +          +   V  L     +IR           +   ++++L      ++
Sbjct: 75  PFQQALVPLDSWVEGGIGWLVDNLRPVFQLIRAPV------ELALGGMTHLLQTVPSTLM 128

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIW 407
            G+   IAWQ +   +   T   ++ V  +G      +T+  V+  +    +I +PVGI 
Sbjct: 129 IGLLTLIAWQLVNGRMALGTLFSLVVVGLIGAWSDAMVTLSLVLTSLFFCVLIGLPVGIL 188

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     +S   +P    +   PA V+   +V      ++   +   +         ++  
Sbjct: 189 LARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLFGIGNVPGVVVTVIF----ALPPMIRL 244

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G    P D  E A SF  +  +    + LP   P  + G       A +  +++ + 
Sbjct: 245 TMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMI 304

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + G       GLG  +     +       +G L +    + L+R 
Sbjct: 305 AVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342


>gi|94991665|ref|YP_599764.1| glycine betaine-binding protein / glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS2096]
 gi|94545173|gb|ABF35220.1| Glycine betaine-binding protein / Glycine betaine transport system
           permease protein [Streptococcus pyogenes MGAS2096]
          Length = 339

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+    +     ++  +P   +  +    +   L +    T   +L A +IS+L  
Sbjct: 54  LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  AK+  +  ++ PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +        ++ +IP +L E S +F  +G QK + + +P +   ++  +  +M   
Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV   MI         PG+G  +  A++  D+ +   + L ++ +  + D++
Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I              W    + +    +     +      T   V+V  +I+ +
Sbjct: 51  IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+     +   + P    +   PA V+    V+      +       +     
Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +          P +  E + +F  TG +    + LP      + G       A +
Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +   +           GLG  +  + +        +  L +    + L+R 
Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272


>gi|308186280|ref|YP_003930411.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1]
 gi|308056790|gb|ADO08962.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1]
          Length = 263

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV           L Q+ + ++ R L    I      +   +   S+    +L 
Sbjct: 39  LPAPEKIVTTFWQLTASGELWQHLAISSWRALIGFSIGGSIGLILGLITGTSKTGERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 99  TSVQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGLMWLTLIVAETISANA---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277
             GIG     A +      ++ A++    +  L D    LL R  + W   ++L+    
Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAALLLERVWLRWHPAYQLKEENA 263



 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 74/209 (35%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  
Sbjct: 123 ----DESAKIFLVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S         G+G     + E      VV+ +++  
Sbjct: 179 PNIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583
                     L L R    WHP Y     
Sbjct: 233 LLGKLADVAALLLERVWLRWHPAYQLKEE 261


>gi|293609438|ref|ZP_06691740.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827890|gb|EFF86253.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 279

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      ++A     S+     L P    ++SIP L
Sbjct: 72  LDLAHSDLFAHIYISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ + L EV + +R
Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S+S  W F++A+E+I          GIG  ++   
Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 238 ETSRPDIVIIAIILLALLGKVTDTLM-KLIENWLLRWR 274



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV++  II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 79  LFAHIYISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238


>gi|300718020|ref|YP_003742823.1| glycine betaine/L-proline transport system permease [Erwinia
           billingiae Eb661]
 gi|299063856|emb|CAX60976.1| glycine betaine/L-proline transport system permease protein
           [Erwinia billingiae Eb661]
          Length = 412

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +++   I  +V  I +        A  T   +L+A++  +
Sbjct: 159 LLGMPAPVAIVIFALIAWQMSSLGMGIATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 218

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 219 LIGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 275

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E   SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 276 A-----LPPIVRLTILGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 330

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 331 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 381



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + +I       F  +   V  +      +    P           
Sbjct: 121 PLDSWV------TTGIDWIVSHFRPVFQGIRVPVDYILSAFQQLLLGMPAPV-------- 166

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + IF        ++G+   ++  ++           +    +    V+  ++   +
Sbjct: 167 ---AIVIFALIAWQMSSLGMGIATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIL 219

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 220 IGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 275

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E   SF  +  +    + LP   P  + G       A +
Sbjct: 276 ALPPIVRLTILGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 335

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 336 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 381


>gi|238794435|ref|ZP_04638045.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia intermedia ATCC 29909]
 gi|238726230|gb|EEQ17774.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia intermedia ATCC 29909]
          Length = 347

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q +T+   +  ++  + +        A  T   +L+++   +
Sbjct: 92  LLGMPAPIAILVFALIAWQFSTLGMGVATLISLVAIGAIGAWSQAMVTLALVLTSLFFCI 151

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 152 LIGLPMGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 208

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 209 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 263

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 264 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P           
Sbjct: 54  PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPI-------- 99

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  +V           +    +T+  V+  +    +
Sbjct: 100 ---AILVFALIAWQFSTLGMGVATLISLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 152

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 153 IGLPMGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 208

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 209 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 268

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 269 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314


>gi|325529732|gb|EGD06588.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia sp. TJI49]
          Length = 115

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 78/114 (68%), Positives = 96/114 (84%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +    I+LD  +LP+YA RTTLRML+AMV SL FT +Y TLAAKSRR GMVL+PILDI+Q
Sbjct: 2   LQTQKISLDPSNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQ 61

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           S+P+LGF++FTV +F+ L+PG+V+GAELAAIFAIFTSQ WNMTFS YQSL  +P
Sbjct: 62  SVPVLGFISFTVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVP 115


>gi|167041194|gb|ABZ05952.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_001L24]
          Length = 719

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 94/565 (16%), Positives = 186/565 (32%), Gaps = 61/565 (10%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
             I  I + V    + + +T   +L A  IS L        + +S+R+   L PIL++MQ
Sbjct: 184 AAITMIYISVFGQWKPSMQTLSFVLVAAPISFLLGLALGIWSYRSKRVEAALNPILNVMQ 243

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           ++P   ++   +V F     G   GA    IFA        M       L  +  ++ + 
Sbjct: 244 TMPHYSYIVVIMVMFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQA 295

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            +    + +Q  + + +P +   ++  +          ++    + V  + I   G+G  
Sbjct: 296 GKMSGCNEFQLLFKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGWN 348

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           + LA+ +  +   L A + +  +  L D++     + W++K         +   +     
Sbjct: 349 LLLALNQLRIGLALEAGICISLIAVLLDKMS----LAWAHKQTDYFAHLNFLQRNKYGLF 404

Query: 289 FRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL---- 334
           F     +  I  S  +F+           P +  +         + + +   F QL    
Sbjct: 405 FVGAVIVGLILASFGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIFN 464

Query: 335 ---------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGC 384
                            M  +  F +V G    I       +V  FT    L   W    
Sbjct: 465 TWLIVDVLQPMRAAYLRMPIVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRAL 524

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T +     +I + II +  G         +         L  FP+ V+   V+      
Sbjct: 525 VTAYMATFGVIASGIIGVISGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGIT 584

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  + + +        Y     I G  + P    + AS   +T  +    I  P  FP
Sbjct: 585 DTSVLIAVIIYATIPATRY----TIEGLRSVPQALHDAASMSGVTRLQRLFQIDFPLAFP 640

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GSFPEVVLGVLIM 562
           + + G       A    I+               LG YI ++     G    ++LG+ + 
Sbjct: 641 HIMLGINQTVVFALFMVIIGAFIGTED-------LGQYIMKALSDLKGGGKALILGLCV- 692

Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587
               LA++  +      +  +  +L
Sbjct: 693 AFIGLAVDNLIR----TWANKRKKL 713


>gi|325272379|ref|ZP_08138777.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324102504|gb|EGB99952.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 236

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ V ++ A++  IPVGI IG+       + P  +     P   + PL+V     
Sbjct: 42  GASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 101

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      LL+       I      G           A S   +  +  R++ILP   
Sbjct: 102 GELSK----VLLIFLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSAL 157

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 158 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 211

Query: 564 CFVLALN---RFLWHPLYLY 580
               AL    R L   L  +
Sbjct: 212 LIAFALEMSLRALQRKLVPW 231



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   +  R+  A++ + L           +R    +L P+++  + IP L +L  
Sbjct: 35  ASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 94

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  IF +    +  +    +  +       ++S   S  Q
Sbjct: 95  IVIWCGIG--------ELSKVLLIFLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQ 146

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 147 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 200

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 201 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 232


>gi|327394926|dbj|BAK12348.1| glycine betaine/L-proline transport system permease protein proW
           [Pantoea ananatis AJ13355]
          Length = 383

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   I    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 135 PVAIALFALIAWQIASPAMGIATL-ISLIAIGAIGAWSQAMITLALVLTALLFCIIIGLP 193

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 194 MGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 246

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E S SF  S  Q  + + +P +MP ++  +  ++     
Sbjct: 247 -LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 305

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 306 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 351



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +        +   P+   +    + L  +          L + Q  S  + I     + 
Sbjct: 103 VVNHFRPVFQSIRVPVDYILSAFQQLLLGMPAPVAIALFALIAWQIASPAMGIATLISLI 162

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +    AW                       IT+  V+  ++   II +P+GIW+     
Sbjct: 163 AIGAIGAWS-------------------QAMITLALVLTALLFCIIIGLPMGIWLARSER 203

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +  ++P    +   PA V+   +V          N+   ++ I      I+   I G  
Sbjct: 204 AARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIK 259

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E + SF  +  +    + LP   P  + G       A +  +++ + + G   
Sbjct: 260 QVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG--- 316

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +     +       +G + +    + L+R 
Sbjct: 317 ----GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 351


>gi|154151551|ref|YP_001405169.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Methanoregula boonei 6A8]
 gi|154000103|gb|ABS56526.1| binding-protein-dependent transport systems inner membrane
           component [Methanoregula boonei 6A8]
          Length = 280

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 11/200 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFP 435
             ++    +++ RV+V   IA  + +P+G  +G +     + + P  Q+L        FP
Sbjct: 77  GELLTNIAVSLGRVLVGFFIALAVALPLGFLLGGWFKSFETAVNPLLQVLGQANPFTLFP 136

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + ++ +    L+       ++ +  QW +LFN ++G         ++A S  I  W+ +R
Sbjct: 137 VFITLLGIGELSK----ISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFR 192

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P   TG   +   A+   I +E+         ++GLG  I ++      P++
Sbjct: 193 KVLLPAAMPSVFTGIRMSAVFAFFMLIGAEMIG------ASSGLGYMILQAQATFQMPKM 246

Query: 556 VLGVLIMCCFVLALNRFLWH 575
            +G++ +    +  N  L  
Sbjct: 247 WVGIVTVAFLGILFNWILLQ 266



 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 16/252 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           SR+       +  F+L+  +     L       VP  I+  +        L    + +  
Sbjct: 29  SRKFIHVTGAIFVFLLIWQLAPYFGLINPIIIPVPTTILQKMIQLTLSGELLTNIAVSLG 88

Query: 71  RMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           R+L    I+L        L     +     + P+L ++            +         
Sbjct: 89  RVLVGFFIALAVALPLGFLLGGWFKSFETAVNPLLQVLGQANPFTLFPVFITLLGIG--- 145

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                EL+ I  IF    W + F+    + N+   + +++RS  +  WQ F  + +P +M
Sbjct: 146 -----ELSKISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLPAAM 200

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + MS    +F ++ +EMI          G+G  I  A     +  +   ++T+ 
Sbjct: 201 PSVFTGIRMSAVFAFFMLIGAEMIGASS------GLGYMILQAQATFQMPKMWVGIVTVA 254

Query: 250 GVIFLYDQLLFR 261
            +  L++ +L +
Sbjct: 255 FLGILFNWILLQ 266


>gi|269966457|ref|ZP_06180541.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 40B]
 gi|269828914|gb|EEZ83164.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 40B]
          Length = 361

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F 
Sbjct: 139 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P +L E   SF  +  Q  + + 
Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  L D++
Sbjct: 304 GLGIVILAILLDRI 317



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR           +    +    +     +
Sbjct: 50  PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 109

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                         +V    +  ++        T+  V+  +    +I +P+GIW+    
Sbjct: 110 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 168

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  ++P    +   PA V+   +V          N+   ++ I      ++   I G 
Sbjct: 169 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 224

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   SF     +    I LP   P  + G       + +  +++ + + G  
Sbjct: 225 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 282

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G L +    + L+R 
Sbjct: 283 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|197124196|ref|YP_002136147.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Anaeromyxobacter sp. K]
 gi|196174045|gb|ACG75018.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. K]
          Length = 269

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     +      +++RVV    + + + +P+G+ +G RP +   + P  Q+L   P 
Sbjct: 61  VAWAFSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPP 120

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          +     L+  G  + +L N IAG       +   A +   + 
Sbjct: 121 IAYIPLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASE 176

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  I++P   PY + G     G A+   IV+E+ +         GLG  I E+ E  
Sbjct: 177 WTLFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYF 230

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +V+ G++ +    L ++
Sbjct: 231 WSDKVIAGMISIGIAGLGID 250



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP  A  +  R++    +          L      +  ++ P++ I++ IP + ++  
Sbjct: 67  GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + N+       +R+   S W 
Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW + VP +MP ++  + + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             ++  M+++       D  + R
Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255


>gi|270261219|ref|ZP_06189492.1| transporter [Serratia odorifera 4Rx13]
 gi|270044703|gb|EFA17794.1| transporter [Serratia odorifera 4Rx13]
          Length = 264

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V++  I              P  +V           L Q+ + ++ R L    I   
Sbjct: 19  VTLVVIWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRALIGFSIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E++RS+ LSG++ F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 FMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADVSAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 245 LERVWLRWHPAYQLKPGEA 263



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRV 390
            R++         V+  +++   W S   +           T      +     I+ +R 
Sbjct: 10  HRLAPWALPVTLVVIWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 70  LIGFSIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+R +  ++LPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239


>gi|220918976|ref|YP_002494280.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956830|gb|ACL67214.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 269

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     +      +++RVV    + + + +P+G+ +G RP +   + P  Q+L   P 
Sbjct: 61  LAWAFSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPP 120

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          +     L+  G  + +L N IAG       +   A +   + 
Sbjct: 121 IAYIPLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASE 176

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  I++P   PY + G     G A+   IV+E+ +         GLG  I E+ E  
Sbjct: 177 WTLFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYF 230

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +V+ G++ +    L ++
Sbjct: 231 WSDKVIAGMISIGIAGLGID 250



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP  A  +  R++    +          L      +  ++ P++ I++ IP + ++  
Sbjct: 67  GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + N+       +R+   S W 
Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW + VP +MP ++  + + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             ++  M+++       D  + R
Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255


>gi|188533081|ref|YP_001906878.1| glycine betaine transporter membrane protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028123|emb|CAO95980.1| Glycine betaine/L-proline transport system permease protein
           [Erwinia tasmaniensis Et1/99]
          Length = 387

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q ++    +  +V  + +        A  T   +L+A++  +
Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S+R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 194 IIGLPLGIWLARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 251 A-----LPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +  T   +    P           
Sbjct: 96  PLDSWV------TTAIDWVVTHFRPLFQGVRLPVDYILSTFQQLLLGMPAPV-------- 141

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        +  +   ++  +V           +    +    V+  ++   I
Sbjct: 142 ---AIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCII 194

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 195 IGLPLGIWLARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF  +  +    + LP   P  + G       A +
Sbjct: 251 ALPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356


>gi|282855801|ref|ZP_06265106.1| sulfate transport system permease protein [Pyramidobacter piscolens
           W5455]
 gi|282586368|gb|EFB91631.1| sulfate transport system permease protein [Pyramidobacter piscolens
           W5455]
          Length = 280

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 21/201 (10%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
            +  +     I+  RV    +   ++ +P+GI +G    ++  +    ++L   P   + 
Sbjct: 56  QMGSMAVNVWISCLRVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWI 115

Query: 435 PLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           PL+++      L                +    + +++  G  + IL N + G S  P  
Sbjct: 116 PLLLAWFGVASLATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPAT 175

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A     +    +  ++LPG  P  VTG     GGAW   + +E+          +G
Sbjct: 176 LIDSARVLGASERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEMMPG-----SISG 230

Query: 539 LGAYIAESTEKGSFPEVVLGV 559
           +G  I  +        V+ G+
Sbjct: 231 IGYLITHAYTVARTDIVMAGM 251



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 17/201 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+    +  L+       L    + +  +L  +++I++ +P L ++   + +F    
Sbjct: 67  SCLRVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWIPLLLAWFGVAS 126

Query: 128 PGKVIGAE------------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              + G E               +  IF    + +  +    +  +P  L + +R    S
Sbjct: 127 LATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPATLIDSARVLGAS 186

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F+ + +P + P +V  M + + G W  +VA+EM+        + GIG  I  A   
Sbjct: 187 ERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEMMPG-----SISGIGYLITHAYTV 241

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
                ++  M+++  +  L D
Sbjct: 242 ARTDIVMAGMISIGIIGLLID 262


>gi|84489800|ref|YP_448032.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Methanosphaera stadtmanae DSM 3091]
 gi|84373119|gb|ABC57389.1| predicted ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease protein [Methanosphaera stadtmanae DSM 3091]
          Length = 251

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+++V++ +IIA+I+ I +G+  G+  +          +L   P   + P  +       
Sbjct: 65  TLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSVIVSVLRPIPPIAWIPFSILWFGIG- 123

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +L    ++  G  + I    + G         E A +F ++  +    +ILP   PY
Sbjct: 124 ---SLPAIFIIFMGCVFPIFVYTVDGVHRTKKVLIESALTFGVSNEQMITEVILPSTIPY 180

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+G   A G A   +I  E+         ++G+G  I  ST        V+G+L++   
Sbjct: 181 IVSGLKVAIGIALMCTISGEMIG------SSSGIGYMILTSTNLFDTGSTVVGMLLIGFI 234

Query: 566 VLALNRFL 573
            +  +   
Sbjct: 235 GIIFDYIF 242



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P ++ +     L    L      T  +++  ++I+ +       +A  S+    +   
Sbjct: 40  PGPVEVFNSFINLLTSGRLVTDILDTLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSV 99

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ +++ IP + ++ F++++F            L AIF IF   V+ +       +    
Sbjct: 100 IVSVLRPIPPIAWIPFSILWFGIG--------SLPAIFIIFMGCVFPIFVYTVDGVHRTK 151

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L E + +F +S  Q    + +P ++P +V  + +++       ++ EMI         
Sbjct: 152 KVLIESALTFGVSNEQMITEVILPSTIPYIVSGLKVAIGIALMCTISGEMIGSSS----- 206

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG  I  +    D  + +  ML +  +  ++D +  +
Sbjct: 207 -GIGYMILTSTNLFDTGSTVVGMLLIGFIGIIFDYIFTK 244


>gi|146276813|ref|YP_001166972.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555054|gb|ABP69667.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 412

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRV+   +  +++ IP+G  +   P       P  + +   P     PLV+     
Sbjct: 219 GASLFRVLAGFLAGALVGIPLGYAMALSPWARGWFDPIVEFMRPVPPLALIPLVIIWFGI 278

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       +L+   + W +     +G ++        A S   +  +   ++I+P   
Sbjct: 279 GEVGK----VILLFLASLWIMAIAARSGVTSVRLAKVHAAYSLGASRPQLLWHVIVPHSL 334

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA  A G  W   + +E+ +         G G  I  +++      V++GV+++ 
Sbjct: 335 PDLFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIIAASKFQQTDVVLMGVILIG 388

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                ++  +           L
Sbjct: 389 LIGYGIDILM-----RLAESRL 405



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L  +   +  R+L+  +   L         A S        PI++ M+ +P L  +   
Sbjct: 213 ALASHLGASLFRVLAGFLAGALVGIPLGYAMALSPWARGWFDPIVEFMRPVPPLALIPLV 272

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GKVI         +F + +W M  +    + ++       + S   S  Q 
Sbjct: 273 IIWFGIGEVGKVI--------LLFLASLWIMAIAARSGVTSVRLAKVHAAYSLGASRPQL 324

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W++ VP S+P L     ++M   W  VVA+E++          G G  I  A K Q   
Sbjct: 325 LWHVIVPHSLPDLFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIIAASKFQQTD 378

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            +L  ++ +  + +  D L+
Sbjct: 379 VVLMGVILIGLIGYGIDILM 398


>gi|188583085|ref|YP_001926530.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346583|gb|ACB81995.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 285

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 89/263 (33%), Gaps = 16/263 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                      + +   +       L   WF     +    A+ +               
Sbjct: 22  RRAGTGARLGASAVNRLAPLLGLAGLLALWFAGGLVLESVPAYAAFAGFAPGPALASFAE 81

Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +I  G        ++ R+   +  A ++  P+G+ +G  P     +QP  QLL       
Sbjct: 82  LIASGEAWRAAAPSLARIGQGLAAAFLLGAPLGLLVGSAPLAERILQPPFQLLRMISPLA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+ V     +       +  L+     W ILF+  AG       +  +A +       
Sbjct: 142 WMPVAVLAFPSWDG----AIVFLIAAAAIWPILFSTAAGVKRVDPVWLAMARNLGAGRLA 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R +I+P +    +TG   A G AW   + +E          T+GLG  I ++ +  S+
Sbjct: 198 ALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAINDARDTLSY 251

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
             +   VL++     AL+  L  
Sbjct: 252 DRLAALVLLIGLIGYALDSVLGR 274



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 82/238 (34%), Gaps = 14/238 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F   + + ++  +       P   +      +      + A+ +  R+   +  + L  
Sbjct: 51  WFAGGLVLESVPAYAAFAGFAPGPALASFAELIASGEAWRAAAPSLARIGQGLAAAFLLG 110

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L   +     +L P   +++ I  L ++   V+ F           + A +F I 
Sbjct: 111 APLGLLVGSAPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +W + FS    +  +      ++R+           + VP  +  ++  + +++   
Sbjct: 163 AAAIWPILFSTAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  +V +E + V        G+G  I  A        +   +L +  + +  D +L R
Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGLIGYALDSVLGR 274


>gi|126739819|ref|ZP_01755510.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
 gi|126719051|gb|EBA15762.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
          Length = 421

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVVV  ++ SI+ IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     W +     AG S         A S   +  +  R++I+P   P 
Sbjct: 290 TGK----IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   + +R++   V+  +           S        PI++ M+ +P L  +   
Sbjct: 222 TLWEHLGWSLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        IF +F + +W MT +    +  +       + S   S  Q 
Sbjct: 282 IIWFGIWETGK--------IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQI 333

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|86160168|ref|YP_466953.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           subunit [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776679|gb|ABC83516.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 269

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 98/256 (38%), Gaps = 11/256 (4%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L R+L  +   F   +  +     VS ++      V+                N   + 
Sbjct: 6   RLARSLA-VPVIFLAAWEGVSRAGWVSPIVLPAPSQVLLRWIAYARPFEPYAGGNWLAWA 64

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               +      +++RVV    + + + +P+G+ +G RP +   + P  Q+L   P   + 
Sbjct: 65  FSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYI 124

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +          +     L+  G  + +L N IAG       +   A +   + W  +
Sbjct: 125 PLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWTLF 180

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I++P   PY + G     G A+   IV+E+ +         GLG  I E+ E     +
Sbjct: 181 WRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYFWSDK 234

Query: 555 VVLGVLIMCCFVLALN 570
           V+ G++ +    L ++
Sbjct: 235 VIAGMISIGIAGLGID 250



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP  A  +  R++    +          L      +  ++ P++ I++ IP + ++  
Sbjct: 67  GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A F I     + +  +    + N+       +R+   S W 
Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW + VP +MP ++  + + +   +  V+ +EMI V        G+G  I  A +    
Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             ++  M+++       D  + R
Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255


>gi|328957271|ref|YP_004374657.1| glycine betaine transport system permease protein OpuAB
           [Carnobacterium sp. 17-4]
 gi|328673595|gb|AEB29641.1| glycine betaine transport system permease protein OpuAB
           [Carnobacterium sp. 17-4]
          Length = 281

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T   +L A ++S++    +  L AKS+    ++ P+LD MQ++P   +L  
Sbjct: 90  QGLWEDLMNTLTLVLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIP 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFAI  +  +         +  +  +L E + SF  +G Q
Sbjct: 150 AVAFFG---IGMVPGVFASLIFAIPPTVRF-----TNLGIRQVSHELVEAAESFGSTGAQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +   ++  +  ++      VV + MI         PG+G  +  +++   +
Sbjct: 202 KLFKVELPLAKSTIMAGINQTVMLALSMVVIASMI-------GAPGLGREVLSSLQRAQI 254

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                + L ++ +  + D+L
Sbjct: 255 GTGFVSGLGLVVLAIIIDRL 274



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V  +++ II +P GI +      ++ I P    +   PA V+    V+      
Sbjct: 99  TLTLVLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIPAVAFFGIGM 158

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +       +  I  T  +       G     ++  E A SF  TG +    + LP     
Sbjct: 159 VPGVFASLIFAIPPTVRF----TNLGIRQVSHELVEAAESFGSTGAQKLFKVELPLAKST 214

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A +  +++ +           GLG  +  S ++       +  L +   
Sbjct: 215 IMAGINQTVMLALSMVVIASMIG-------APGLGREVLSSLQRAQIGTGFVSGLGLVVL 267

Query: 566 VLALNRF 572
            + ++R 
Sbjct: 268 AIIIDRL 274


>gi|283853315|ref|ZP_06370564.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
 gi|283571296|gb|EFC19307.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
          Length = 251

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 8/186 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV+V   +A ++  PVG+ +G  P +     P    +   P   + PL +  +   
Sbjct: 60  MSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPLAILWLGLG 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +     + L+  G  + ++    +G  A    + E            WR ++LPG  P
Sbjct: 120 LAS----AAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLAVWRKVLLPGCLP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G  W   + +E A     +    GLG  I  + +      V+ G++ +  
Sbjct: 176 AALTGVRVGLGIGWMTLVAAEFAGVRGGY----GLGYMILSARDLQRIDMVMAGMVAIGL 231

Query: 565 FVLALN 570
             LA+ 
Sbjct: 232 VGLAME 237



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 77/203 (37%), Gaps = 12/203 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +LP +A  +  R+L    ++++           S RL    +P++D ++ IP L ++  
Sbjct: 52  RTLPMHAWMSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPL 111

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++              +A   IF    + +  +    +  + R   E  R        
Sbjct: 112 AILWLGLGL--------ASAAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLA 163

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P  +P  +  + + +  GW  +VA+E   V        G+G  I  A   Q +
Sbjct: 164 VWRKVLLPGCLPAALTGVRVGLGIGWMTLVAAEFAGVRGGY----GLGYMILSARDLQRI 219

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             ++  M+ +  V    +  L R
Sbjct: 220 DMVMAGMVAIGLVGLAMELGLKR 242


>gi|312961036|ref|ZP_07775541.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284694|gb|EFQ63270.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 321

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 17/279 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVI 78
           F LLA    I II   L G Q       I+  V +TL  V  +   A  T   +L+++  
Sbjct: 52  FGLLAIPPSIFIIIATLLGWQVGGRRIGILCFVTLTLLGVIGVWSDAMVTLALVLTSLFF 111

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +       L A+S RL M L P+LD MQ++P   +L   V+ F     G V G  +  
Sbjct: 112 CAVIGIPLGVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLFG---IGNVPGVLVTI 168

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF++       +       +  +P D  E +R+F  + +Q    + +P + P ++  +  
Sbjct: 169 IFSVA-----PLVRLTNLGIRQVPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQ 223

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + MI VG       G+G  +   I   D+       L ++ +    D+L
Sbjct: 224 ALMLSLSMVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFLDRL 276

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
             + M   SN+               V  L RK    + 
Sbjct: 277 -TQAMGERSNRATKGEHWYQTGPAGVVYRLKRKNTIPKI 314



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
           + + L      +   +A  + WQ  G           T   V+ V     +T+  V+  +
Sbjct: 50  IQFGLLAIPPSIFIIIATLLGWQVGGRRIGILCFVTLTLLGVIGVWSDAMVTLALVLTSL 109

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
              ++I IP+G+       +   ++P    +   PA V+   VV          N+   L
Sbjct: 110 FFCAVIGIPLGVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLFGIG----NVPGVL 165

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + I  +   ++     G    P D  E A +F  T ++  R + LP   P  + G   A 
Sbjct: 166 VTIIFSVAPLVRLTNLGIRQVPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQAL 225

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ + S G       GLG  +     +       +G L +    + L+R 
Sbjct: 226 MLSLSMVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFLDRL 276


>gi|330505559|ref|YP_004382428.1| ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328919845|gb|AEB60676.1| ABC transporter, permease protein [Pseudomonas mendocina NK-01]
          Length = 274

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +  +  +  +             + +    L    L  +   ++LR+L+   I    
Sbjct: 33  AILLASLESVVRIGWIPAYLMPAPSELAVTLWELAEGPLWTHILASSLRVLAGFAIGASL 92

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V  +L   SRRL   L P    ++++P L ++   +++       KV    + + F +
Sbjct: 93  ALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAWVPLLLIWLGIDESSKVTLIAIGSFFPV 152

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +         ++   + N+ R L EV     LS       + VP + P L   +   +S 
Sbjct: 153 Y--------LNLVAGIRNVDRKLVEVGELCNLSRLATIRRIFVPAAQPYLFTGLRAGLSM 204

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W  VVA+E++          GIG  +    +      +L A+ T+  +  L D LL
Sbjct: 205 AWLCVVAAELLA------ATEGIGYLLTDGREVSRPDRVLVAIATLAVMGKLSDSLL 255



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 17/260 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +   R+            L       +  ++ I W       A      ++  +     +
Sbjct: 13  RLAWRSWLPGLSSLQGWLLPAILLASLESVVRIGWIPAYLMPAPSELAVTLWELAEGPLW 72

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             +L        +  RV+    I + + + +G  +G    + + + P  Q L A P   +
Sbjct: 73  THIL-------ASSLRVLAGFAIGASLALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAW 125

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +             L+  G+ + +  N++AG         EV    +++    
Sbjct: 126 VPLLLIWLGI----DESSKVTLIAIGSFFPVYLNLVAGIRNVDRKLVEVGELCNLSRLAT 181

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I +P   PY  TG       AW   + +E+ +       T G+G  + +  E     
Sbjct: 182 IRRIFVPAAQPYLFTGLRAGLSMAWLCVVAAELLA------ATEGIGYLLTDGREVSRPD 235

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V++ +  +       +  L
Sbjct: 236 RVLVAIATLAVMGKLSDSLL 255


>gi|146310501|ref|YP_001175575.1| taurine transporter subunit [Enterobacter sp. 638]
 gi|145317377|gb|ABP59524.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 275

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++V ++ A ++ IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 81  AASLGRILVALLAAVVLGIPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 141 GETSK----ILLIYLAIFAPVAMSAVAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGAL 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G++++ 
Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIMVIA 250

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 251 VIAFGLELGLRALQRRLTPW 270



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 92/218 (42%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+ + +  R+L A++ +++           S  +  +L P++++ + +P 
Sbjct: 68  PQGFMDATLWQHLAASLGRILVALLAAVVLGIPVGIAMGLSPTVRGILDPLIELYRPVPP 127

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F      K++   LA    +  S V          + +  +     ++S 
Sbjct: 128 LAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSAV--------AGVKSAQQVRLRAAQSL 179

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q  W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 180 GASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 233

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  ++ +  + F  +   + L R +  W 
Sbjct: 234 GEFLATDVVLAGIMVIAVIAFGLELGLRALQRRLTPWH 271


>gi|241205023|ref|YP_002976119.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858913|gb|ACS56580.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 278

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 98/270 (36%), Gaps = 18/270 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQY 64
           +  P             +A V +  + +            P D+      T     LP  
Sbjct: 22  LRLPLPGLDKLTPYLVPVAIVALWQLASSAGWISSRIMPSPADVGLAFWSTTVSGQLPND 81

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R  + +++     F+       SR    +    L ++++IP L  +   +++F 
Sbjct: 82  VLVSAGRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFG 141

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + +F      ++ +  + Y  + N+ RDL E+ + + +  W  F  + 
Sbjct: 142 IG--------EESKLFLTSLGVLFPVYLNTYHGVRNVDRDLIEMGKVYGMGNWTLFRKVI 193

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P +   +  ++   W  ++ SE I          GIG     A +      ++ A
Sbjct: 194 FPGALPSIFVGLRYALGIMWLTLIVSESIAASS------GIGHMANNAREFMMTDVVVLA 247

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           ++    +  L D   + L R ++VW+  ++
Sbjct: 248 LVIYAVLGKLADVIARALERRLLVWNPVYQ 277



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 88/283 (31%), Gaps = 32/283 (11%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R++   +       L L    +++  L       +  +A    W S   +    +  D
Sbjct: 8   FVRSVASEKAGKAGLRLPLPGLDKLTPYLVPVAIVALWQLASSAGWISSRIM---PSPAD 64

Query: 376 VLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           V    W             ++  R    +++   I   +GI  G             Q+L
Sbjct: 65  VGLAFWSTTVSGQLPNDVLVSAGRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQML 124

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PLV+        +       L   G  + +  N   G      D  E+   
Sbjct: 125 RTIPHLAMIPLVILWFGIGEESK----LFLTSLGVLFPVYLNTYHGVRNVDRDLIEMGKV 180

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           + +  W  +R +I PG  P    G   A G  W   IVSE  +       ++G+G     
Sbjct: 181 YGMGNWTLFRKVIFPGALPSIFVGLRYALGIMWLTLIVSESIA------ASSGIGHMANN 234

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579
           + E      VVL ++I        +           +W+P+Y 
Sbjct: 235 AREFMMTDVVVLALVIYAVLGKLADVIARALERRLLVWNPVYQ 277


>gi|304405669|ref|ZP_07387328.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304345708|gb|EFM11543.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 277

 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   +      ++ R +    +A ++ IP+G+ IG+ P ++  + P  +L     A 
Sbjct: 70  GLLEGGDIAVHFQASIVRSLSGFSLAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAAL 129

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P+ V  +     +       L+ +   W IL N I G         + A S  +   
Sbjct: 130 ALLPVFVLILGIGETSK----VALVFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLGSL 185

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R ++ +ILP   P   TG   A   +    + +E+           GLG  I  +     
Sbjct: 186 RLFQKVILPASVPTIFTGIRLAGAYSILVLVAAEMVG------AKAGLGYLINYTQFNFQ 239

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
            P++  G++ +    L  N+ L
Sbjct: 240 IPQMYAGIITISILGLLFNQLL 261



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 86/214 (40%), Gaps = 17/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   +  +   + +R LS   +++L       L     ++  +L P+L++ ++   L  
Sbjct: 72  LEGGDIAVHFQASIVRSLSGFSLAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAALAL 131

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+             E + +  +F S  W +  +    + N+   L + ++S  L 
Sbjct: 132 LPVFVLILGIG--------ETSKVALVFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLG 183

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P S+P +   + ++ +     +VA+EM+          G+G  I      
Sbjct: 184 SLRLFQKVILPASVPTIFTGIRLAGAYSILVLVAAEMVGAKA------GLGYLINYTQFN 237

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             +  +   ++T+  +  L++QL   L R    W
Sbjct: 238 FQIPQMYAGIITISILGLLFNQLLITLERRFSSW 271


>gi|152975750|ref|YP_001375267.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024502|gb|ABS22272.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 283

 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   +   +  V+  +        +   +      +     I++FR  V   I   + +
Sbjct: 43  LLIWQFAGFLELVSKTVLPTPWDIFLAFQSLVQTGELFNHLSISVFRAAVGFFIGGSLGV 102

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G  +GF       + P  Q+L   P     PL V    +   +      LL+  G  +
Sbjct: 103 VLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFF 158

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N   G     +   +VA     +  +    +I+P   P  + GA  + G AW + +
Sbjct: 159 PLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNLLLGARLSLGVAWVSLV 218

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 219 VAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 263



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 18/255 (7%)

Query: 24  AFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             +L+      L L        P DI       +    L  + S +  R      I    
Sbjct: 41  IVLLIWQFAGFLELVSKTVLPTPWDIFLAFQSLVQTGELFNHLSISVFRAAVGFFIGGSL 100

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V  T+   S R    L P + +++++P L      V++F      KV+     A F  
Sbjct: 101 GVVLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF-- 158

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+  
Sbjct: 159 ------PLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNLLLGARLSLGV 212

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
            W  +V +E++          GIG  I  A +  +   +   ++    V    D   +LL
Sbjct: 213 AWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLL 266

Query: 260 FRPMIVWSNKFRLER 274
               + W + ++ E 
Sbjct: 267 EVRCLKWRDNYKGES 281


>gi|332637580|ref|ZP_08416443.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Weissella cibaria KACC 11862]
          Length = 262

 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 17/231 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLII 395
            L      +V  VA+   W    Y+ +     +    +W          I+++R  + ++
Sbjct: 18  WLIPIALIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLL 77

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   +   +G+  G      +      Q++   P     PL++                L
Sbjct: 78  IGGAVGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIIIWFGIG----EPAKVTL 133

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + I  N + G  +      E+  S+ +T W+ +  +I PG  P  + G   A G
Sbjct: 134 VAIGVMFPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALG 193

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             W   IVSE  S       ++G+G     + +    P + L ++I     
Sbjct: 194 VMWTTLIVSETIS------ASSGIGYMETNAQQFLDMPTIFLAIIIYAILG 238



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A ++V  +              P  +++         +L Q    +  R    ++I   
Sbjct: 22  IALIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLLIGGA 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV       SR    +    + ++++IP L  +   +++F    P        A +  
Sbjct: 82  VGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIIIWFGIGEP--------AKVTL 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    + +I   L E+ +S+RL+ WQ F  +  P +MP ++  +  ++ 
Sbjct: 134 VAIGVMFPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALG 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W  ++ SE I          GIG     A +  D+  I  A++    +  + D +
Sbjct: 194 VMWTTLIVSETISASS------GIGYMETNAQQFLDMPTIFLAIIIYAILGKVSDWI 244


>gi|184158672|ref|YP_001847011.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874367|ref|ZP_08442278.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
 gi|183210266|gb|ACC57664.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|322507517|gb|ADX02971.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323518587|gb|ADX92968.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332737446|gb|EGJ68362.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
          Length = 279

 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      ++A     S+     L P    ++SIP L
Sbjct: 72  LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ + L EV + +R
Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S+S  W F++A+E+I          GIG  ++   
Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWLLRWR 274



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV+   II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 79  LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238


>gi|153953414|ref|YP_001394179.1| ProW [Clostridium kluyveri DSM 555]
 gi|219854039|ref|YP_002471161.1| hypothetical protein CKR_0696 [Clostridium kluyveri NBRC 12016]
 gi|146346295|gb|EDK32831.1| ProW [Clostridium kluyveri DSM 555]
 gi|219567763|dbj|BAH05747.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 274

 Score =  123 bits (310), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++V  ++ + L G +          I  + +D   L      T   ++ + +ISL+ 
Sbjct: 49  IIVIIVFSLLALKLSGKKVAV----FTAIGLLFIDCIELWPQTMETLALVIVSTLISLII 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LA++S     V+ PILD MQ++P   +L   V++F     GKV GA    IF++
Sbjct: 105 GIPLGILASRSEGFNRVIRPILDFMQTMPAFVYLIPAVLFFGM---GKVPGAISTVIFSM 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  +P D+ E +RSF  +  Q  + + +P ++P ++  +  ++  
Sbjct: 162 PPA-----VRLTNLGIRQVPEDVIEAARSFGSTKSQMLYKVQIPIALPTILAGVNQTIML 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV S MI  G       G+G  +   I + ++ +   + + ++ +  + D++
Sbjct: 217 SLSMVVISAMIGAG-------GLGREVYNGITQMEIGSGFESGIAVVILAMVLDRI 265



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 81/276 (29%), Gaps = 11/276 (3%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
              +    FF  + N +         +        ++      +S    I          
Sbjct: 1   MFTFHVGPFFEFIVNWLTDNMEPFFHLITLINSTLIEGLETVLLSVPSIIVIIVFSLLAL 60

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                +   +      + D + +      T+  V+V  +I+ II IP+GI        + 
Sbjct: 61  KLSGKKVAVFTAIGLLFIDCIELWPQTMETLALVIVSTLISLIIGIPLGILASRSEGFNR 120

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I+P    +   PA V+    V       +   +   +     +    +     G    P
Sbjct: 121 VIRPILDFMQTMPAFVYLIPAVLFFGMGKVPGAISTVIF----SMPPAVRLTNLGIRQVP 176

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D  E A SF  T  +    + +P   P  + G       + +  ++S +   G      
Sbjct: 177 EDVIEAARSFGSTKSQMLYKVQIPIALPTILAGVNQTIMLSLSMVVISAMIGAG------ 230

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            GLG  +     +          + +    + L+R 
Sbjct: 231 -GLGREVYNGITQMEIGSGFESGIAVVILAMVLDRI 265


>gi|167761565|ref|ZP_02433692.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704]
 gi|167661231|gb|EDS05361.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704]
          Length = 219

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 5/213 (2%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           + ++         R+       +  +      ++ I WF     V     +  +  +   
Sbjct: 11  DRMRAATNAGDRGRWRKFGGRNRNVAALIGLAVICIIWFAAAHIVDKPFLFPYLEDVFKE 70

Query: 371 FTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             +    LYV+    ITM RV+   + A II  P+G+ +G+ P I   + PF   L   P
Sbjct: 71  VGFSLTDLYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + PL +                L+ F   + I+ N I+G      D+   A S   +
Sbjct: 131 IMAWVPLAIVWFGIGDG----PTIFLIAFSGIFTIILNTISGVQDISKDYYHAARSMGAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   + ++LPG  P  +TG   A G  W + I
Sbjct: 187 TFGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 71/162 (43%), Gaps = 8/162 (4%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D+   V  +L    + +    T  R+L+  + + +  F    L   S ++   L P ++ 
Sbjct: 66  DVFKEVGFSLTDLYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNS 125

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ +PI+ ++   +V+F               IF I  S ++ +  +    + +I +D  
Sbjct: 126 LRQVPIMAWVPLAIVWFGIGDGP--------TIFLIAFSGIFTIILNTISGVQDISKDYY 177

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
             +RS   S +     + +P S+PG++  + +++  GW  V+
Sbjct: 178 HAARSMGASTFGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219


>gi|197295196|ref|YP_002153737.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944675|emb|CAR57279.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 275

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 27/263 (10%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377
                   +     R        W  V   VA  + W +  + +                
Sbjct: 8   HRSSAPGTRRTGGARSPAPAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSAF 67

Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                     +++    +++ R+ V +  A +  +P+G+ +G  P +   + P  Q L  
Sbjct: 68  ASLRSLCADDHLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVPWVERMLSPTFQFLRM 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL V             +  L+ F   W +L +  AG       + ++ +S  
Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLA 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T      +I+LP I    + G   A G  W   + +E+           GLG  I ++ 
Sbjct: 184 ATRSELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           ++ ++ E+   ++++     AL+
Sbjct: 238 DRLAYAELTAVIVVIGALGFALD 260



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 23/254 (9%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---------SLP 62
           +R   P     L    ++  + +    I   T P  +                     L 
Sbjct: 21  ARSPAPAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSAFASLRSLCADDHLL 80

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++A  +  R+   +  +LL       L  +   +  +L P    ++ +  L ++   V+ 
Sbjct: 81  EHALVSLRRIGVGLGAALLAGVPLGLLLGRVPWVERMLSPTFQFLRMVSPLSWMPLAVMS 140

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           + A  F +  + +W +  S    +  I R   ++  S   +  +   +
Sbjct: 141 FGIG--------DRAIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRSELLVH 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P     L+  + +++   W  +V +EM+ V        G+G  I           + 
Sbjct: 193 IVLPAIAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYAELT 246

Query: 243 YAMLTMLGVIFLYD 256
             ++ +  + F  D
Sbjct: 247 AVIVVIGALGFALD 260


>gi|222086307|ref|YP_002544840.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723755|gb|ACM26911.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 303

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 16/237 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +   F++++ ++ ++    +   +      I  I + V  L      T   +    +I++
Sbjct: 65  NTPWFIVILVMMGVVYAASRNLKI-VAGTAISMILIGVCGLWGDTMVTLAMVTVCTLIAI 123

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L A+S RL  ++ P LD+MQ++P   +L   V+ F     GKV G     I+
Sbjct: 124 VIGLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIFG---IGKVPGLIAVVIY 180

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  + +++ E + +F  S  QK + + +P ++P ++  +  ++
Sbjct: 181 AVP-----PIIRLTNLGIRLVDKEVLEAADAFGSSHRQKLFNVQIPLALPTIMAGINQTI 235

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 VV + M+ VG       G+G     AI  Q +         ++ +  ++D+
Sbjct: 236 MMALAMVVVASMVGVG-------GLGKNTLQAINNQFITVGFLNGFALVAIAIIFDR 285



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 71/231 (30%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    +    +    A     + +           V  +     +T+  V V  +IA +I
Sbjct: 66  TPWFIVILVMMGVVYAASRNLKIVAGTAISMILIGVCGLWGDTMVTLAMVTVCTLIAIVI 125

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     + S I P   ++   P  V+   VV           +   + ++   
Sbjct: 126 GLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIFGIG----KVPGLIAVVIYA 181

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+     G      +  E A +F  +  +    + +P   P  + G       A   
Sbjct: 182 VPPIIRLTNLGIRLVDKEVLEAADAFGSSHRQKLFNVQIPLALPTIMAGINQTIMMALAM 241

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +V+ +   G       GLG    ++          L    +    +  +R
Sbjct: 242 VVVASMVGVG-------GLGKNTLQAINNQFITVGFLNGFALVAIAIIFDR 285


>gi|213966520|ref|ZP_03394686.1| taurine ABC transporter, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213950836|gb|EEB62252.1| taurine ABC transporter, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 314

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 97/212 (45%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   T  R+   + + +    +   + ++S+ +  V+ P +  ++S+P LG++   +
Sbjct: 116 LWQHLLATLERIAVGLSLGIAAGVLVGLVLSRSQAVRAVVEPYISFLRSLPPLGYIGLLI 175

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F           +++ +  +F +    +T +    +  IP+D    +R+   +  Q F
Sbjct: 176 VWFGVG--------DVSKVVLLFLATFPIITIATLTGIIGIPQDWNRAARTLGATNSQVF 227

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ VP ++PGL+  + ++    W  +VA+EM         +PGIG    ++  + +   
Sbjct: 228 RHVIVPGTLPGLINGIRLANGMSWACIVAAEM------NDGIPGIGGVAYVSGTQLETAL 281

Query: 241 ILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
            + AM+ +     + DQ+L    R +  W  K
Sbjct: 282 TIAAMILIGITAVIVDQILLFAERRLAPWHGK 313



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 80/202 (39%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R+ V + +     + VG+ +     + + ++P+   L + P   +  L++     
Sbjct: 121 LATLERIAVGLSLGIAAGVLVGLVLSRSQAVRAVVEPYISFLRSLPPLGYIGLLIVWFGV 180

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L+   T   I    + G    P D+   A +   T  + +R++I+PG  
Sbjct: 181 GDVSK----VVLLFLATFPIITIATLTGIIGIPQDWNRAARTLGATNSQVFRHVIVPGTL 236

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G +W   + +E+      +    G+G     S  +      +  ++++ 
Sbjct: 237 PGLINGIRLANGMSWACIVAAEM------NDGIPGIGGVAYVSGTQLETALTIAAMILIG 290

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
              + +++ L     L+  R L
Sbjct: 291 ITAVIVDQIL-----LFAERRL 307


>gi|328881264|emb|CCA54503.1| Glycine betaine ABC transport system, permease or glycine
           betaine-binding protein OpuABC [Streptomyces venezuelae
           ATCC 10712]
          Length = 603

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L  GI+ ++   ++             + +D   L   A  T   +L A +++L+    
Sbjct: 49  LLFAGILAVVAWWLRGLAAGVLAFAGFAL-VDSVQLWDEAMATLSLVLVATLVTLVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S+ +  VL P+LD MQ++P + +L   +++F     G V G     +FA+   
Sbjct: 108 LGIWAARSKTVSAVLRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIVFALPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPRNTLLRVQLPLALPTIMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVVLAMYLDRM 265



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 70/234 (29%), Gaps = 12/234 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +     ++  S     +  S     +   +  +                   +  + W+ 
Sbjct: 3   RLPLGEWVDSSVDWLQAQFSWLFDAVSTGVTGLYDGIDAVLSAPQPLLFAGILAVVAWW- 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +    A  +A+     + +   + +          T+  V+V  ++  +I +P+GIW   
Sbjct: 62  LRGLAAGVLAFAGFALVDSVQLWDE-------AMATLSLVLVATLVTLVIAVPLGIWAAR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S+ ++P    +   PA V+    +       +   +   +          +     
Sbjct: 115 SKTVSAVLRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIVF----ALPPGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           G      +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 171 GIRQVDGELVEAAEAFGTTPRNTLLRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224


>gi|317491340|ref|ZP_07949776.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920887|gb|EFV42210.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 368

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 16/236 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMVISLLF 82
                I I+   L   Q   +      ++  + +        A  T   +L+++   +L 
Sbjct: 115 GMPAPIAILVFALIAWQCAGLGMGAATLIGLVAIGAIGAWSQAMVTLALVLTSLFFCMLI 174

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IFA 
Sbjct: 175 GLPLGIWLARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA- 230

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++  
Sbjct: 231 ----LPPIVRLTSLGIQQVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLML 286

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 287 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 335



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           +   V   IAWQ  G  +   T   ++ +  +G      +T+  V+  +    +I +P+G
Sbjct: 120 IAILVFALIAWQCAGLGMGAATLIGLVAIGAIGAWSQAMVTLALVLTSLFFCMLIGLPLG 179

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  I+P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 180 IWLARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 235

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P D  E A SF  +  +    + LP   P  + G       A +  +++ 
Sbjct: 236 RLTSLGIQQVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 295

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 296 MIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 335


>gi|332711923|ref|ZP_08431853.1| ABC-type proline/glycine betaine transport system, permease
           component [Lyngbya majuscula 3L]
 gi|332349251|gb|EGJ28861.1| ABC-type proline/glycine betaine transport system, permease
           component [Lyngbya majuscula 3L]
          Length = 664

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  +   +++A+V  ++    +    A S R+  VL P+LD MQ++P   +L   V+ F 
Sbjct: 114 AMVSLSLVVTAVVFCMVIGITFGIACASSDRIEKVLRPLLDAMQTLPSFVYLVPVVMLFG 173

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     +FAI       +       +  +  ++ E + +F  +  Q  + + 
Sbjct: 174 ---IGAVPGVMATCVFAIP-----PLIRLTNLGIRQVSTEVVEAAIAFGSTPTQMLFEVQ 225

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  ++       V + MI VG       G+G  +   +   ++      
Sbjct: 226 IPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQGLGRVNVGLAAVG 278

Query: 245 MLTMLGVIFLYDQL 258
            L+++ +  + D++
Sbjct: 279 GLSIVLIAVMLDRI 292



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 11/207 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y V   +    L       +++  VV  ++   +I I  GI       I   ++P    +
Sbjct: 97  YSVAALSLIGFLGAWTQAMVSLSLVVTAVVFCMVIGITFGIACASSDRIEKVLRPLLDAM 156

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P+ V+   VV       +   +   +  I      ++     G      +  E A +
Sbjct: 157 QTLPSFVYLVPVVMLFGIGAVPGVMATCVFAI----PPLIRLTNLGIRQVSTEVVEAAIA 212

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  T  +    + +P   P  + G   A   A + S+V+ +   G       GLG  + +
Sbjct: 213 FGSTPTQMLFEVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQ 265

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572
              + +     +G L +    + L+R 
Sbjct: 266 GLGRVNVGLAAVGGLSIVLIAVMLDRI 292


>gi|257867410|ref|ZP_05647063.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257873741|ref|ZP_05653394.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257877492|ref|ZP_05657145.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC20]
 gi|257801466|gb|EEV30396.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257807905|gb|EEV36727.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257811658|gb|EEV40478.1| glycine betaine/L-proline ABC transporter [Enterococcus
           casseliflavus EC20]
          Length = 574

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T   +L + ++S++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 88  QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA     +          +  I R+L E S SF  +GWQ
Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 200 KLIKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                + ++++ +  + D+ 
Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIW----I 402
              +V   A         + +  FT+  +L++   G  T +   V L++++S++     I
Sbjct: 54  LLMIVLLTAAAFFVSRKKFGLPAFTFVGLLFIYNQGLWTDLMNTVTLVLLSSLVSIIIGI 113

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +       S + P    +   P  V+    V+      +       +        
Sbjct: 114 PLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E + SF  TGW+    + LP      + G       A +  +
Sbjct: 170 PTVRMTNLGIRQISRELVEASDSFGGTGWQKLIKLELPLAKSTILAGVNQTTMLALSMVV 229

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  + ++       +  + +    + ++RF
Sbjct: 230 IASMIG-------APGLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272


>gi|153949190|ref|YP_001399348.1| ABC aliphatic sulfonates ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|167466455|ref|ZP_02331159.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis FV-1]
 gi|170022674|ref|YP_001719179.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|152960685|gb|ABS48146.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pseudotuberculosis IP 31758]
 gi|169749208|gb|ACA66726.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
          Length = 264

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V           L Q+ + ++ R L    I      V   +   SR    +L 
Sbjct: 39  LPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 99  SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LSG++    + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
             GIG     A +      ++ A++    +  L D   QLL R  + W   ++ +     
Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 264



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390
            R++  +      V   VA+   W S   +                  +     I+ +R 
Sbjct: 10  HRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I   I + +G+  G        +    Q++   P     PLV+            
Sbjct: 70  LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239


>gi|91223853|ref|ZP_01259117.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 12G01]
 gi|91191345|gb|EAS77610.1| glycine betaine/L-proline transport system permease [Vibrio
           alginolyticus 12G01]
          Length = 361

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F 
Sbjct: 139 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P +L E   SF  +  Q  + + 
Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  L D++
Sbjct: 304 GLGIVILAILLDRI 317



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR           +    +    +     +
Sbjct: 50  PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 109

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                         +V    +  ++        T+  V+  +    +I +P+GIW+    
Sbjct: 110 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 168

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  ++P    +   PA V+   +V          N+   ++ I      ++   I G 
Sbjct: 169 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 224

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   SF     +    I LP   P  + G       + +  +++ + + G  
Sbjct: 225 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 282

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G L +    + L+R 
Sbjct: 283 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|300775527|ref|ZP_07085388.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300505554|gb|EFK36691.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 275

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 16/240 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-VHSLPQYASRTTLRMLSAMVI 78
           + L      + I+   L  + +      +V    ++L  +  L +    T   +  + + 
Sbjct: 42  WVLTNTPFYVIILFFTLLALWKAGKAIAVVTAAGLSLIFLMGLWKETMETLALIFVSTIT 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+ +     LAAKS+    ++ P+LD+MQ++P   +L   V++F     GKV GA    
Sbjct: 102 ALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFFS---IGKVPGAFATI 158

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+  +            +  +P+D+ E +R+F  +G Q  + + +P +M  ++  +  
Sbjct: 159 IFAMPPA-----VRLTALGIEAVPKDIVEAARAFGATGRQILFKVELPLAMKTILTGINQ 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + MI  G       G+G  +   I   D+     + L+++ +  + D++
Sbjct: 214 TILLSLSMVVIAGMIAAG-------GLGEKVLEGINNLDIGLGFESGLSVVILAIILDRI 266



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 79/238 (33%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L    F V+      +A    G  +   T   +  +  +G       T+  + V  
Sbjct: 40  IEWVLTNTPFYVIILFFTLLALWKAGKAIAVVTAAGLSLIFLMGLWKETMETLALIFVST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           I A I+ IP+GI           I+P   L+   PA V+    V   S   +       +
Sbjct: 100 ITALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFFSIGKVPGAFATII 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G  A P D  E A +F  TG +    + LP      +TG     
Sbjct: 160 FAMPPAVRL----TALGIEAVPKDIVEAARAFGATGRQILFKVELPLAMKTILTGINQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ + + G       GLG  + E              L +    + L+R 
Sbjct: 216 LLSLSMVVIAGMIAAG-------GLGEKVLEGINNLDIGLGFESGLSVVILAIILDRI 266


>gi|239815502|ref|YP_002944412.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239802079|gb|ACS19146.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 383

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 17/232 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSL--PQYASRTTLRMLSAMVISLLFTFVY 86
           + +I ++     +       +      L V  L     A  T   +L+++V  ++     
Sbjct: 114 LAMIALIGLFAWQFAGRALAIGTTAALLLVAMLGIWPEAMVTLSLVLTSLVFCMIIGLPL 173

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+    
Sbjct: 174 GVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFALA--- 227

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +  DL E +R++  S WQ    + +P +MP ++  +  ++      
Sbjct: 228 --PLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSM 285

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI VG       G+G  +   I   D+       L ++ +    D+L
Sbjct: 286 VVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 330



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 86/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V  +L       +  +    AWQ  G  +   T   +L V  LG      +T+  V+  +
Sbjct: 104 VQGLLTGLPTLAMIALIGLFAWQFAGRALAIGTTAALLLVAMLGIWPEAMVTLSLVLTSL 163

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +   II +P+G+ +         ++P    +   PA V+   VV          N+   +
Sbjct: 164 VFCMIIGLPLGVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLFGIG----NVPGVI 219

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + I      ++     G      D  E A ++  + W+    + LP   P  + G   A 
Sbjct: 220 VTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQAL 279

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ + + G       GLG  +     +       +G L +    ++L+R 
Sbjct: 280 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 330


>gi|300709406|ref|YP_003735220.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
 gi|299123089|gb|ADJ13428.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
          Length = 274

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 23/271 (8%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
            T+  ++  F    + + + +    +  + +F +   +          ++         +
Sbjct: 2   STVDRVKRRFDAGTVPVLTKRARQALSVVLFFVLWAVLVRLEILGFGRFVGPVPALSTFV 61

Query: 378 YVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +                  +  RVVV +++A+   IP+G+ IG        + P  ++
Sbjct: 62  SALLGAPMTGSGATIYQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEV 121

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   + P+ +  +  +       +  ++  G  + IL N I G     +++   A 
Sbjct: 122 FRPVPPVAWVPIALLLMPTFRSG----VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAE 177

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S        +R++I P   P  VTG  T  G AW   + +E+ + G              
Sbjct: 178 SLGADSREVFRHVIFPATLPSIVTGVSTGVGLAWITVVAAEMIAGGIGIGYII------F 231

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           ++        V +G++ +     A    ++ 
Sbjct: 232 QAYRLLQTDVVAVGMIAIGILGYASATVVYR 262



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 103/260 (39%), Gaps = 21/260 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-------VPITLDVHSL 61
           P +++R    +  +L FVL   ++ + + G      P   +          P+T    ++
Sbjct: 17  PVLTKRARQALSVVLFFVLWAVLVRLEILGFGRFVGPVPALSTFVSALLGAPMTGSGATI 76

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+A+ + +R++ AMV++         +   SRR    L P L++ + +P + ++   ++
Sbjct: 77  YQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPPVAWVPIALL 136

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                  G         IF +F    + +  +  + +  +  +    + S      + F 
Sbjct: 137 LMPTFRSG--------VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESLGADSREVFR 188

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++  P ++P +V  +   +   W  VVA+EMI  G  +  +         A +      +
Sbjct: 189 HVIFPATLPSIVTGVSTGVGLAWITVVAAEMIAGGIGIGYII------FQAYRLLQTDVV 242

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
              M+ +  + +    +++R
Sbjct: 243 AVGMIAIGILGYASATVVYR 262


>gi|86749954|ref|YP_486450.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86572982|gb|ABD07539.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 266

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 25/259 (9%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---- 385
                    R   +  +  F ++    + + W     +        +++    G I    
Sbjct: 2   RGRSFAVRLRSIALAVVVPFGLLLLWDVLVRWTGTRLVPPPSGVAVMMWDFAFGGIYDDA 61

Query: 386 -----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      ++ RV     +A+++ IP+G+ IG  P + + + P   LL   P   + 
Sbjct: 62  YSGSLPIHFWKSVQRVYGGFFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWL 121

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +       L+  G  + IL N I G  +      E A      G + +
Sbjct: 122 PLSMIFFGLGPKS----AVFLVFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQLF 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P    G       AW   +V E+           GLGA I +         
Sbjct: 178 RAVVLPAALPSIFNGLRLGASFAWILIVVGEM------TGVPEGLGAVIMDGRTLSRTDL 231

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+ G++I+       +R L
Sbjct: 232 VITGMIIIGITGFLSDRIL 250



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SLP +  ++  R+     ++ L       +  +   L  +L P L +++ IP+  +L  
Sbjct: 64  GSLPIHFWKSVQRVYGGFFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F             +A+F +F    + +  +    + ++   L E +      G Q
Sbjct: 124 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQ 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + +  S  W  +V  EM  V +      G+G+ I         
Sbjct: 176 LFRAVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 229

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M+ +    FL D++L       + WS 
Sbjct: 230 DLVITGMIIIGITGFLSDRILVALSNYFLRWSP 262


>gi|325290257|ref|YP_004266438.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324965658|gb|ADY56437.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 264

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 84/219 (38%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I     + L+  +L ++   +  R+     ++ +       L  K++     L P
Sbjct: 49  PSPSKIYVAGWLMLENGTLLEHLMASLGRLAYGFCLAAVLAVPAGILIGKTKSFAQWLNP 108

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  +Q IP + ++   +++            E + +  I  +  + +  +    + ++ 
Sbjct: 109 TLSFLQHIPPIAWIPLFILWLGIE--------EASKVAVITYASFFPIFLNTVYGVKSVD 160

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L EV R+F L+  Q    + +P +   +   + + MS  W  +V +E+I         
Sbjct: 161 PKLVEVGRAFMLTPGQMIKRVYIPSATMPIFVGLRLGMSNCWRALVGAELIAAST----- 215

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG+ I  A +      +   + T+     + D +L +
Sbjct: 216 -GIGALITQARQSSQPDMMFVGIFTIGIAGIVIDGILLK 253



 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   ++     ++ R+     +A+++ +P GI IG     +  + P    L   P   + 
Sbjct: 63  ENGTLLEHLMASLGRLAYGFCLAAVLAVPAGILIGKTKSFAQWLNPTLSFLQHIPPIAWI 122

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +  +     +       ++ + + + I  N + G  +      EV  +F +T  +  
Sbjct: 123 PLFILWLGIEEASK----VAVITYASFFPIFLNTVYGVKSVDPKLVEVGRAFMLTPGQMI 178

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + + +P        G        W A + +E+ +       +TG+GA I ++ +      
Sbjct: 179 KRVYIPSATMPIFVGLRLGMSNCWRALVGAELIA------ASTGIGALITQARQSSQPDM 232

Query: 555 VVLGVLIMCCFVLALNRFLWH 575
           + +G+  +    + ++  L  
Sbjct: 233 MFVGIFTIGIAGIVIDGILLK 253


>gi|91777773|ref|YP_552981.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91690433|gb|ABE33631.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 269

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 17/258 (6%)

Query: 327 FPENFLQLCSNQRVSY-MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
           FP  F +L    RV+   L +    ++          +        T+  +L +I  G  
Sbjct: 11  FPARFGRLTRFARVAGQRLSLLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATGTF 70

Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                IT++RVV   ++A+++  P+GI +G    + S  +P   ++    A ++    + 
Sbjct: 71  AEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFALI 130

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                +         ++       IL NV  GA +   ++ E+A SF ++  +    I L
Sbjct: 131 WFGISNGT----TIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKVMTKIYL 186

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + PY+ +GA  A G  W  S+V+E          + G+G  + ++ +     +V    
Sbjct: 187 PTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLVQTDQVFAWT 240

Query: 560 LIMCCFVLALNRFLWHPL 577
           L M   ++ L   +  PL
Sbjct: 241 LTMVVLMVVLEYGILKPL 258



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 102/264 (38%), Gaps = 19/264 (7%)

Query: 5   NILPPFISR-----RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           ++ P    R     R+      LLA  L++  +            P    + +   +   
Sbjct: 9   SVFPARFGRLTRFARVAGQRLSLLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATG 68

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +  +    T  R+++  +++ L       L   +RRLG    P+L ++ ++    +  F 
Sbjct: 69  TFAEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFA 128

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F               IF +F   +  +  +++Q   ++  +  E++RSF++S  + 
Sbjct: 129 LIWFGISNG--------TTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKV 180

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P  +P       ++   GW   + +E I   +      G+G  +  A       
Sbjct: 181 MTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIGSSN------GVGYRLRQAADLVQTD 234

Query: 240 AILYAMLTMLGVIFLYDQLLFRPM 263
            +    LTM+ ++ + +  + +P+
Sbjct: 235 QVFAWTLTMVVLMVVLEYGILKPL 258


>gi|226314655|ref|YP_002774551.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
 gi|226097605|dbj|BAH46047.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 281

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 16/258 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHS 60
           FL++ +   I   +    + L        II   L   +   V   +   + + L     
Sbjct: 29  FLFDFISAGIGGTVDLFSWILTGIPFWALIILFTLLAYRAGKVAIALFTFIGLLLIQNLG 88

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
             +++  T   +L+A +IS++         AK+  +  V+ P+LD MQ++P   +L   +
Sbjct: 89  YWEHSMETLALVLTAGLISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYLIPAI 148

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F     GKV G   + IFA+               +  +P DL E S +F  + WQK 
Sbjct: 149 FFFGL---GKVPGVIASVIFAMP-----PTIRLTNLGIRQVPADLIEASEAFGSTYWQKL 200

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +   ++  +  S+      VV + MI          G+G+ +  A+ +  +  
Sbjct: 201 TKVQLPIAKTTMMAGINQSIMLALSMVVIASMI-------GAKGLGADVYRAVTQIKIGE 253

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A L ++ +  L D+L
Sbjct: 254 GFEAGLAIVILAILLDRL 271



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 16/237 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLII 395
           S++L    F  +  +   +A+++    +  FT+  +L +  LG       T+  V+   +
Sbjct: 46  SWILTGIPFWALIILFTLLAYRAGKVAIALFTFIGLLLIQNLGYWEHSMETLALVLTAGL 105

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ II IPVGIW      +   + P    +   PA V+    +       +   +   + 
Sbjct: 106 ISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYLIPAIFFFGLGKVPGVIASVIF 165

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                    +     G    P D  E + +F  T W+    + LP      + G   +  
Sbjct: 166 ----AMPPTIRLTNLGIRQVPADLIEASEAFGSTYWQKLTKVQLPIAKTTMMAGINQSIM 221

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ +           GLGA +  +  +    E     L +    + L+R 
Sbjct: 222 LALSMVVIASMIG-------AKGLGADVYRAVTQIKIGEGFEAGLAIVILAILLDRL 271


>gi|325284546|ref|YP_004257085.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
 gi|324316720|gb|ADY27831.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
          Length = 264

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV+V + +A +I  P+G+ +G    +    +P  QLL       + PL V  +  
Sbjct: 74  LVSLKRVMVGLGLAFVIGAPLGLLVGSSRLLERATEPAFQLLRMISPLSWMPLAVMVLGV 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   + LL+     W ILF    G       + ++  S   T    + +I LPGI 
Sbjct: 134 GDA----PIYLLLALAGLWPILFAAAGGVKNLNASWLDLGRSLSATRGEMFWHITLPGIL 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G   A G  W   +  E+           GLG +I ++ ++ ++PE++  V+++ 
Sbjct: 190 GSLLQGVRLAIGTLWILLVPCEMLG------VRAGLGYFILDTRDRLAYPELMATVVLIG 243

Query: 564 CFVLALN 570
                L+
Sbjct: 244 LLGYLLD 250



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 82/218 (37%), Gaps = 14/218 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
             E   P   +  +   L   +L ++   +  R++  + ++ +       L   SR L  
Sbjct: 47  FLEQFSPGAALPALTRLLAEGTLWEHLLVSLKRVMVGLGLAFVIGAPLGLLVGSSRLLER 106

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
              P   +++ I  L ++   V+          +   LA         +W + F+    +
Sbjct: 107 ATEPAFQLLRMISPLSWMPLAVMVLGVGDAPIYLLLALAG--------LWPILFAAAGGV 158

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N+     ++ RS   +  + FW++ +P  +  L+  + +++   W  +V  EM+ V   
Sbjct: 159 KNLNASWLDLGRSLSATRGEMFWHITLPGILGSLLQGVRLAIGTLWILLVPCEMLGV--- 215

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                G+G +I           ++  ++ +  + +L D
Sbjct: 216 ---RAGLGYFILDTRDRLAYPELMATVVLIGLLGYLLD 250


>gi|226309964|ref|YP_002769858.1| glycine betaine ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
 gi|226092912|dbj|BAH41354.1| probable glycine betaine ABC transporter permease protein
           [Brevibacillus brevis NBRC 100599]
          Length = 279

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T   +L+A +IS+        L A+      ++ PILD+MQ++P   +L   + 
Sbjct: 87  WDETMETLGLVLTATMISIAIGIPVGILCARHDTFRNLVTPILDLMQTMPAFVYLIPAIF 146

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G+V G   + IFA     +  +       +  +P ++EE + +F  +GWQK  
Sbjct: 147 FFGL---GEVPGVIASVIFA-----LPPIVRLTNLGIRQVPAEMEEAADAFGATGWQKLV 198

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++   ++  +   +      VV + MI          G+G+ +  A+ + D+   
Sbjct: 199 KVQLPYAKSTILAGVNQCIMLALSMVVIAAMI-------GAKGLGADVYRAVSQVDIGRG 251

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L+++ +  + D+L
Sbjct: 252 FEAGLSIVIIAIVLDRL 268



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     S+ + V   +    L        T+  V+   +I+  I IPVGI      
Sbjct: 60  AAAWVFAGRASMVFTVVGLSLIHNLGYWDETMETLGLVLTATMISIAIGIPVGILCARHD 119

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              + + P   L+   PA V+    +       +   +   +         I+     G 
Sbjct: 120 TFRNLVTPILDLMQTMPAFVYLIPAIFFFGLGEVPGVIASVIF----ALPPIVRLTNLGI 175

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P + +E A +F  TGW+    + LP      + G       A +  +++ +      
Sbjct: 176 RQVPAEMEEAADAFGATGWQKLVKVQLPYAKSTILAGVNQCIMLALSMVVIAAMIG---- 231

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLGA +  +  +          L +    + L+R 
Sbjct: 232 ---AKGLGADVYRAVSQVDIGRGFEAGLSIVIIAIVLDRL 268


>gi|328542595|ref|YP_004302704.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326412341|gb|ADZ69404.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 294

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 19/235 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L    ++GI+ ++    + T      +    + +    + +   RT   +    + +++ 
Sbjct: 61  LVLAAIVGIVFLMSRSWRITLGSLAAL----MAIGYLGMWEDTMRTIAMVAVCTLTAIVL 116

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A+S RL  ++ P+LD+MQ++P+  +L   V+ F     GKV G     I+AI
Sbjct: 117 GIPIGIAMARSDRLQALVNPVLDLMQTMPVFVYLIPVVMIFGL---GKVPGVIAVVIYAI 173

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M       +  +  D+ E + +F  S WQK   + +P ++P ++  +   +  
Sbjct: 174 P-----PMIRLTNLGIRLVSPDVLEAADAFGSSSWQKLRNVQLPLALPTIMAGINQCIMM 228

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
               VV + MI V        G+G  +  AI  Q     +   L ++ +  ++D+
Sbjct: 229 SLAMVVVASMIGV-------RGLGQPVLQAINNQYFTLGVLNGLAIVAIAIIFDR 276



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 83/265 (31%), Gaps = 11/265 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
                  +    TL  +     +  + L      S    +    V     +  +W+    
Sbjct: 23  ESFKAFTRAYGETLETVFEPLRQFLIGLEQLLLTSPWPLVLAAIVGIVFLMSRSWRITLG 82

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
            +        L +      T+  V V  + A ++ IP+GI +     + + + P   L+ 
Sbjct: 83  SLAALMAIGYLGMWEDTMRTIAMVAVCTLTAIVLGIPIGIAMARSDRLQALVNPVLDLMQ 142

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P  V+   VV           +   + ++      ++     G      D  E A +F
Sbjct: 143 TMPVFVYLIPVVMIFGLG----KVPGVIAVVIYAIPPMIRLTNLGIRLVSPDVLEAADAF 198

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+  R + LP   P  + G       +    +V+ +           GLG  + ++
Sbjct: 199 GSSSWQKLRNVQLPLALPTIMAGINQCIMMSLAMVVVASMIG-------VRGLGQPVLQA 251

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNR 571
                F   VL  L +    +  +R
Sbjct: 252 INNQYFTLGVLNGLAIVAIAIIFDR 276


>gi|302561573|ref|ZP_07313915.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces griseoflavus Tu4000]
 gi|302479191|gb|EFL42284.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces griseoflavus Tu4000]
          Length = 872

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  ++   ++ T             LD   L + +  T   ++ A VI+L+ +  
Sbjct: 49  LLLAGIFAVIAFWLRGTFAGVLTFGGFAF-LDSLELWEDSMVTLALVIVATVIALVISVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+   + PILD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSDRVSAFVRPILDFMQTLPAMIYLIPAILFFG---TGPAPGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  +I + ++     A L ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGA-------VIESIGQLNIGLGSEAGLAIVILAIYLDRM 265



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 94/277 (33%), Gaps = 20/277 (7%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +     ++  +     + ++                     LQ      ++ +  +  F 
Sbjct: 3   RIPLGDWVNSAVDWLLANVTWLFDFFKAVFTGAYDGV-NAVLQAPEPLLLAGIFAVIAFW 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +    A  + +    ++ +   ++D         +T+  V+V  +IA +I +PVGIW   
Sbjct: 62  LRGTFAGVLTFGGFAFLDSLELWED-------SMVTLALVIVATVIALVISVPVGIWAAR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S+ ++P    +   PA ++    +  + ++   P   +   +IF      +     
Sbjct: 115 SDRVSAFVRPILDFMQTLPAMIYL---IPAILFFGTGPAPGIVATLIF-ALAPGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA--ITACGGAWNASIVSEVAS 528
           G      +  E A +F  T       + LP   P  + G   +   G +  A+I   V +
Sbjct: 171 GIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS-MAAIAGMVGT 229

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            G        +G         G   E  L ++I+  +
Sbjct: 230 GGLGGAVIESIGQL-----NIGLGSEAGLAIVILAIY 261


>gi|300309716|ref|YP_003773808.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300072501|gb|ADJ61900.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 273

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     ++     +++RVV   +I + + +P+G+ +G    I   +    Q++   P 
Sbjct: 65  LAWAFSGELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPP 124

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +          N     L+  G  + +L N IAG     + +   A +   + 
Sbjct: 125 IAYIPLAILWFGLG----NPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQ 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +  ++LP   PY ++G     G A+   IV+E+ +       + GLG  I E+ E  
Sbjct: 181 STLFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIA------VSNGLGFRIMEAREYF 234

Query: 551 SFPEVVLGVLIMCCFVLALN 570
              +++ G++ +    LA++
Sbjct: 235 WSDKIIAGMITIGLLGLAID 254



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 83/212 (39%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A  +  R+++  +I          L   S+R+  ++   + +++ IP + ++  
Sbjct: 71  GELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAYIPL 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F    P         A+F I     + +  +    +  +       +R+   S   
Sbjct: 131 AILWFGLGNPP--------ALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQST 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + + +   +  V+ +EMI V +      G+G  I  A +    
Sbjct: 183 LFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVSN------GLGFRIMEAREYFWS 236

Query: 239 LAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
             I+  M+T+  +    D  + R    M+ W 
Sbjct: 237 DKIIAGMITIGLLGLAIDLGMSRLNNYMLRWH 268


>gi|291299893|ref|YP_003511171.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290569113|gb|ADD42078.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 641

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 81/525 (15%), Positives = 165/525 (31%), Gaps = 34/525 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L V  L   +  T    ++A+++S+L          +S RL  +L P+LD MQ +P   
Sbjct: 131 ALGVMDLWDESIETLGLTIAAVLLSMLLGVPLGIWMGRSPRLRTLLSPVLDAMQIMPTFT 190

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L    + F    P   I   + AI                 ++  +P  + E S S   
Sbjct: 191 YLAPMALLFSIGNPSATIATLIYAIPVSIRIA--------ALAIEQVPATVVEASESLGS 242

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + WQ    + +P +   L+  +  ++      VV          +I   G+G  +   ++
Sbjct: 243 TRWQTMVKVRLPLARRTLLLAVNQTIMMALSMVVI-------TALIDADGLGQDVVRGLQ 295

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT-----TGIYPADSWVLYLF 289
           + ++   L A L ++ +  + D+   R     + +F + R       G      +VL   
Sbjct: 296 QNNVGMSLEAGLAVVVLAIILDRF-TRIHDRRTTRFTIPRVYVWGFAGACAVIGFVLTAV 354

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFW 348
              +F   +  S  N  + + + +      +   I+       L       V        
Sbjct: 355 LPKDFPEALQVSMVNPVNHVVDVITTDWYGVTSAIKDAASYGILNPMQEFLVRVPFWTII 414

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V        WQS        +    L +      T+  V++ +++  I+ + +G+  
Sbjct: 415 AIFVFLALRFAGWQSAVTAGVCLSAIVALGLWQKSMETLVTVLLGVVLTVIVGVALGVLS 474

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G      + ++P        PA V+    ++          +   +         ++  V
Sbjct: 475 GRSDRFETALRPVLDAAQTMPAFVYLVPALALFGASRFTAIVAAIVYA----APPVVRLV 530

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E A S   T  +    + LP      +              ++  +  
Sbjct: 531 SDGIRGVSPSVVEAARSCGSTSRQLLWKVQLPMSRRSLLLALNQGIVMVLAMVVIGGMVG 590

Query: 529 WGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRF 572
                    GLG  +     +   F       L +    + L+R 
Sbjct: 591 -------AEGLGETVVTGFVQTEEFGAGFAAGLAIVLLGITLDRI 628


>gi|325568907|ref|ZP_08145200.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|325157945|gb|EGC70101.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 574

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T   +L + ++S++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 88  QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA     +          +  I R+L E S SF  +GWQ
Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 200 KLIKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                + ++++ +  + D+ 
Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIW----I 402
              +V   A         + +  FT+  +L++   G  T +   V L++++S++     I
Sbjct: 54  LLMIVLLTAAAFFVSRKKFGLPAFTFVGLLFIYNQGLWTDLMNTVTLVLLSSLVSIIIGI 113

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +       S + P    +   P  V+    V+      +       +        
Sbjct: 114 PLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E + SF  TGW+    + LP      + G       A +  +
Sbjct: 170 PTVRMTNLGIRQISRELVEASDSFGGTGWQKLIKLELPLAKSTILAGVNQTTMLALSMVV 229

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  + ++       +  + +    + ++RF
Sbjct: 230 IASMIG-------APGLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272


>gi|312138999|ref|YP_004006335.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888338|emb|CBH47650.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 266

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+   ++A+ + IP+G+ +G    +   ++    L+   P   + PL +  + Y
Sbjct: 72  AASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGY 131

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+     + IL N   G +  P    E A+       +    I++P   
Sbjct: 132 GDRS----TIFLIFVAAFFPILLNTTVGVAQVPPRLLEAAAMLGTPKAKTLYKIVIPSAM 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               +G   A G +W   +V E          +TGLGA I ++ +      ++ G++ + 
Sbjct: 188 QSITSGLRIALGLSWVVLVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIG 241

Query: 564 CFVLALNRFL 573
                 +RF+
Sbjct: 242 LAGFVTDRFM 251



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 81/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL ++ + +TLR+L+  +++         L  +   +   L   +++++ IP+  +   
Sbjct: 65  GSLWRHLAASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPL 124

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T++             + + IF IF +  + +  +    +  +P  L E +        +
Sbjct: 125 TLLIIGYG--------DRSTIFLIFVAAFFPILLNTTVGVAQVPPRLLEAAAMLGTPKAK 176

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +M  +   + +++   W  +V  E + +        G+G+ I  A      
Sbjct: 177 TLYKIVIPSAMQSITSGLRIALGLSWVVLVVGETVGIST------GLGAMITQARDMSRT 230

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  M+ +    F+ D+ +
Sbjct: 231 DLIIAGMVFIGLAGFVTDRFM 251


>gi|107029251|ref|YP_626346.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116687123|ref|YP_840370.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105898415|gb|ABF81373.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652838|gb|ABK13477.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 275

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 90/263 (34%), Gaps = 27/263 (10%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377
                   +     R    +   W  V   VA    W +  +++                
Sbjct: 8   RRSSAPDTRRAGGARYPARVAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAF 67

Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      ++    +++ R+ V +  A +I +P+G+ +G    +   + P  Q L  
Sbjct: 68  ASLRALCADDQLLEHALVSLRRIGVGLGTALLIGVPLGLLLGRVRWVERMLSPTFQFLRM 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL V             +  L+ F   W +L +  AG +     + ++ +S  
Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLA 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T      +I+LP I    + G   A G  W   + +E+           GLG  I ++ 
Sbjct: 184 ATRRELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           ++ ++ E+   ++++      L+
Sbjct: 238 DRLAYSELTAVIVVIGALGFTLD 260



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 85/249 (34%), Gaps = 20/249 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETT------VPRDIVDIVPITLDVHSLPQYASR 67
           R+      +   V  + +    +H + E         P      +        L ++A  
Sbjct: 26  RVAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAFASLRALCADDQLLEHALV 85

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+   +  +LL       L  + R +  +L P    ++ +  L ++   V+ F    
Sbjct: 86  SLRRIGVGLGTALLIGVPLGLLLGRVRWVERMLSPTFQFLRMVSPLSWMPLAVMSFGIG- 144

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  + A  F +  + +W +  S    +  I R   ++  S   +  +   ++ +P 
Sbjct: 145 -------DRAIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLAATRRELLVHIVLPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               L+  + +++   W  +V +EM+ V        G+G  I           +   ++ 
Sbjct: 198 IAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYSELTAVIVV 251

Query: 248 MLGVIFLYD 256
           +  + F  D
Sbjct: 252 IGALGFTLD 260


>gi|22124163|ref|NP_667586.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45443650|ref|NP_995189.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597894|ref|YP_072085.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108809630|ref|YP_653546.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           Antiqua]
 gi|108813704|ref|YP_649471.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Nepal516]
 gi|145597549|ref|YP_001161625.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Pestoides F]
 gi|153997436|ref|ZP_02022536.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CA88-4125]
 gi|165927575|ref|ZP_02223407.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937418|ref|ZP_02225981.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166012001|ref|ZP_02232899.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214137|ref|ZP_02240172.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401992|ref|ZP_02307475.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167420559|ref|ZP_02312312.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167425472|ref|ZP_02317225.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|218930636|ref|YP_002348511.1| putative aliphatic sulfonates transport permease [Yersinia pestis
           CO92]
 gi|229836766|ref|ZP_04456931.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Pestoides A]
 gi|229839334|ref|ZP_04459493.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229899898|ref|ZP_04515039.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229904210|ref|ZP_04519321.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Nepal516]
 gi|270488648|ref|ZP_06205722.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294505225|ref|YP_003569287.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Z176003]
 gi|21956920|gb|AAM83837.1|AE013624_6 putative transport system permease protein of aliphatic sulfonates
           ABC transporter [Yersinia pestis KIM 10]
 gi|45438520|gb|AAS64066.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51591176|emb|CAH22841.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777352|gb|ABG19871.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Nepal516]
 gi|108781543|gb|ABG15601.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Antiqua]
 gi|115349247|emb|CAL22214.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CO92]
 gi|145209245|gb|ABP38652.1| aliphatic sulfonates transport permease protein [Yersinia pestis
           Pestoides F]
 gi|149289073|gb|EDM39153.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis CA88-4125]
 gi|165914523|gb|EDR33137.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920469|gb|EDR37746.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989085|gb|EDR41386.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204624|gb|EDR49104.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961365|gb|EDR57386.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048578|gb|EDR59986.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055486|gb|EDR65279.1| putative ABC aliphatic sulfonates transporter, permease subunit
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229678328|gb|EEO74433.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Nepal516]
 gi|229687390|gb|EEO79465.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695700|gb|EEO85747.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229705709|gb|EEO91718.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Pestoides A]
 gi|262363287|gb|ACY60008.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis D106004]
 gi|262367334|gb|ACY63891.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis D182038]
 gi|270337152|gb|EFA47929.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355684|gb|ADE66025.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis Z176003]
 gi|320017213|gb|ADW00785.1| putative aliphatic sulfonates transport permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 265

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V           L Q+ + ++ R L    I      V   +   SR    +L 
Sbjct: 40  LPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 100 SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LSG++    + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 152 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
             GIG     A +      ++ A++    +  L D   QLL R  + W   ++ +     
Sbjct: 208 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 265



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390
            R++  +      V   VA+   W S   +                  +     I+ +R 
Sbjct: 11  HRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I   I + +G+  G        +    Q++   P     PLV+            
Sbjct: 71  LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 240


>gi|150010418|ref|YP_001305161.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|237708446|ref|ZP_04538927.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|149938842|gb|ABR45539.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|229457667|gb|EEO63388.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
          Length = 271

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  ++LL        A KS R   +L P+LD MQ++P   +L   V+
Sbjct: 82  WEETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVL 141

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V GA    IFA+       +       +  +P ++ E +RSF  +  Q  +
Sbjct: 142 FFGL---GTVPGAFATIIFAMP-----PVVRLTGLGIRQVPENVIEAARSFGATPRQLLF 193

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  ++      VV S MI  G       G+G  +   I +  +   
Sbjct: 194 KVQLPLALPTILTGINQTIMMALSMVVVSAMISAG-------GLGEVVLKGITQMKIGLG 246

Query: 242 LYAMLTMLGVIFLYDQL 258
               + ++ +  + D++
Sbjct: 247 FEGGIAVVILAIILDRI 263



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 84/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F V   + + +AW  +G  +  FT   +L +  +G       T+  V+    +A
Sbjct: 40  ALYAIPFYVFIPLTVLLAWWKVGKGMGAFTLLGLLLIWGMGFWEETMQTLALVLSSTCMA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IP+GIW G     +  ++P    +   PA V+    V       +       +   
Sbjct: 100 LLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E A SF  T  +    + LP   P  +TG       A
Sbjct: 158 --AMPPVVRLTGLGIRQVPENVIEAARSFGATPRQLLFKVQLPLALPTILTGINQTIMMA 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +VS + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVVSAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|307151303|ref|YP_003886687.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306981531|gb|ADN13412.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 265

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 10/199 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T      +     IT++RV++  II S++   +G   G+   I   + P  Q L   P+ 
Sbjct: 59  TLASSGELFHHIGITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSL 118

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL +  +  Y  +       L+  G  + +  N+++G  +      EV   + ++ +
Sbjct: 119 AWVPLFILWMGIYETSK----VALIAVGVFFPVYLNLMSGVKSVERKLVEVGKVYRLSNF 174

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R I  P   P Y  G  +  G  W   + +E+         + GLG  + +    G 
Sbjct: 175 QLIRRIFFPATLPAYFVGLRSGLGLGWMFVVAAEIMG------SSQGLGFLLVDGQTTGR 228

Query: 552 FPEVVLGVLIMCCFVLALN 570
              ++  +L+        +
Sbjct: 229 PTIILASILLFALLGKLTD 247



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 106/267 (39%), Gaps = 18/267 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASR 67
           P +S R     +  L  +    I++++ +        P  +++ +        L  +   
Sbjct: 13  PLLSVRCLKGFWLPLFLLFGWEILSLIGYFPPNLLPAPSKVIETIWTLASSGELFHHIGI 72

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++   +I  +   +   L   S ++   L P+L  +++IP L ++   +++     
Sbjct: 73  TLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSLAWVPLFILWMGIYE 132

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV    +   F ++         ++   + ++ R L EV + +RLS +Q    +  P 
Sbjct: 133 TSKVALIAVGVFFPVY--------LNLMSGVKSVERKLVEVGKVYRLSNFQLIRRIFFPA 184

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P     +   +  GW FVVA+E++          G+G  +           IL ++L 
Sbjct: 185 TLPAYFVGLRSGLGLGWMFVVAAEIMGSSQ------GLGFLLVDGQTTGRPTIILASILL 238

Query: 248 MLGVIFLYDQLLF---RPMIVWSNKFR 271
              +  L D  L    + ++ W + ++
Sbjct: 239 FALLGKLTDAALATLGKHLLYWQDSYQ 265


>gi|323138683|ref|ZP_08073749.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
 gi|322396038|gb|EFX98573.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
          Length = 277

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--------QSIGYIVNH 370
           T+  +R             +  + ++D+    ++ GV I   W         +       
Sbjct: 6   TIVRVRSPNIAARFPTMKKRVKNILIDLSGLALLLGVWIVCGWLIERNPATAAFAGFAPV 65

Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            T + +  +I  G        ++ R+   + IA  + +P+G+ +G +           QL
Sbjct: 66  PTLRRLFSMILDGAALAACLPSLARISGGLAIAICMGVPIGVLVGRKEVFRRATHLPFQL 125

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       + P+ +     +    N  +  L++  + W I+F+   G      D+  +A 
Sbjct: 126 LRMVSPLAWMPIAILVFPTW----NGAIVFLIVAASIWPIIFSTAHGLKKLDPDWFRLAH 181

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   + WR    +I+P      +TG   A G AW   + +E          T+GLG  I 
Sbjct: 182 NLGASNWRILSAVIVPATAQDMLTGVRLALGVAWIVLVPAEYLG------VTSGLGYAIN 235

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +   +  +   V+I+      L+  L
Sbjct: 236 DARDTLEYDRLAATVVIIGVIGFLLDSVL 264



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 90/260 (34%), Gaps = 22/260 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HS 60
           P + +R+   + DL    L++G+  +    I+            P+             +
Sbjct: 20  PTMKKRVKNILIDLSGLALLLGVWIVCGWLIERNPATAAFAGFAPVPTLRRLFSMILDGA 79

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                  +  R+   + I++        L  +             +++ +  L ++   +
Sbjct: 80  ALAACLPSLARISGGLAIAICMGVPIGVLVGRKEVFRRATHLPFQLLRMVSPLAWMPIAI 139

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F             A +F I  + +W + FS    L  +  D   ++ +   S W+  
Sbjct: 140 LVFPTWNG--------AIVFLIVAASIWPIIFSTAHGLKKLDPDWFRLAHNLGASNWRIL 191

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP +   ++  + +++   W  +V +E + V        G+G  I  A    +   
Sbjct: 192 SAVIVPATAQDMLTGVRLALGVAWIVLVPAEYLGV------TSGLGYAINDARDTLEYDR 245

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           +   ++ +  + FL D +L 
Sbjct: 246 LAATVVIIGVIGFLLDSVLL 265


>gi|257870168|ref|ZP_05649821.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum
           EG2]
 gi|257804332|gb|EEV33154.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum
           EG2]
          Length = 575

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T   +L + ++S++       L AKS +   ++ PILD MQ++P   +L  
Sbjct: 88  QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA     +          +  I R+L E S SF  +GWQ
Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 200 KLVKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                + ++++ +  + D+ 
Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 86/275 (31%), Gaps = 13/275 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +     +F   L+     L   L        +            +M+ +         + 
Sbjct: 11  VADWVESFTDWLTGTFSGLFSALQSFGQFVMDGMTNTLLFVPPLFMILLLTIAAFFVSSK 70

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                +  ++   F Y   L+   +  +T+  V++  +++ II IP+GI +       S 
Sbjct: 71  KWGLTAFTFVGLLFIYNQGLWTDLMNTVTL--VLLSSLVSIIIGIPLGILMAKSEKAQSI 128

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    +   P  V+    V+      +       +          +     G      
Sbjct: 129 VTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRMTNLGIRQISR 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E + SF  TGW+    + LP      + G       A +  +++ +           
Sbjct: 185 ELVEASDSFGGTGWQKLVKLELPLAKSTILAGVNQTTMLALSMVVIASMIG-------AP 237

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  + ++       +  + +    + ++RF
Sbjct: 238 GLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272


>gi|282900985|ref|ZP_06308918.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
 gi|281194076|gb|EFA69040.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505]
          Length = 247

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 14/246 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           + +    R   +  I W+ +   +     + + +      V      D   +      ++
Sbjct: 1   MTIPLPLRGLVIGSILWWVLTTPLWHQDPVVVDFSPERTSVALVQLLDSGAIFPHIFASL 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            RV V ++ A  + +P GI +G   ++        Q +       + P+ V  +    L 
Sbjct: 61  RRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSWMPIAVMVLGIGDL- 119

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +  L+     W ++ N  AG  +    +  ++     T W     +I+P I P+ +
Sbjct: 120 ---PVYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCATQWEMISQVIIPAIIPHLL 176

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   A G  W   + +E+           GLG YI  + ++ ++ E++  VLI+     
Sbjct: 177 TGIRLAIGVIWIVLVPAEMLG------VNEGLGYYILNTRDRLAYSELMAVVLIIGLIGC 230

Query: 568 ALNRFL 573
            L+  L
Sbjct: 231 FLDITL 236



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           LD  ++  +   +  R+   ++ ++        L   SR L      +   ++ I  L +
Sbjct: 47  LDSGAIFPHIFASLRRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSW 106

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+             +L   F +  + +W +  +    + ++ R    +S+    +
Sbjct: 107 MPIAVMVLGIG--------DLPVYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCAT 158

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+    + +P  +P L+  + +++   W  +V +EM+ V +      G+G YI      
Sbjct: 159 QWEMISQVIIPAIIPHLLTGIRLAIGVIWIVLVPAEMLGVNE------GLGYYILNTRDR 212

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                ++  +L +  +    D  L
Sbjct: 213 LAYSELMAVVLIIGLIGCFLDITL 236


>gi|134300613|ref|YP_001114109.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134053313|gb|ABO51284.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 252

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F       ++    ++++RV++ ++ A+++ +P+GI++G  P +  K  P   L   
Sbjct: 44  LHSFLISLRGELLSHLGVSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAPLLYLTYP 103

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  VF P+ +  +     +      LL+   T + IL      A     ++     S  
Sbjct: 104 IPKVVFMPIFLIILGIGDSSK----ILLITLITFYQILVTTRDAAKNMAKEYIFSLKSLG 159

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W  +R++ LPG  P  +T      G A     ++E       +   TG+G +I +S 
Sbjct: 160 ASSWDLYRHVYLPGCLPAILTALRLGLGTAMAVLFLAE------TYATQTGIGFFIMDSL 213

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++ E+  G++ M      L   L
Sbjct: 214 SRMNYEEMFAGIIAMGLMGFFLYILL 239



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 15/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P D +    I+L    L  +   +  R+L +++ + L          K+  +     P
Sbjct: 38  PLPLDALHSFLISL-RGELLSHLGVSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAP 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L +   IP + F+   ++        K        I  I     + +  +   +  N+ 
Sbjct: 97  LLYLTYPIPKVVFMPIFLIILGIGDSSK--------ILLITLITFYQILVTTRDAAKNMA 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++     +S   S W  + ++ +P  +P ++  + + +      +  +E      T    
Sbjct: 149 KEYIFSLKSLGASSWDLYRHVYLPGCLPAILTALRLGLGTAMAVLFLAE------TYATQ 202

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GIG +I  ++   +   +   ++ M  + F    LL
Sbjct: 203 TGIGFFIMDSLSRMNYEEMFAGIIAMGLMGFFLYILL 239


>gi|330998254|ref|ZP_08322079.1| glycine betaine transport system permease protein opuAB
           [Paraprevotella xylaniphila YIT 11841]
 gi|329568643|gb|EGG50444.1| glycine betaine transport system permease protein opuAB
           [Paraprevotella xylaniphila YIT 11841]
          Length = 271

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  ++LL        A KS R   +L P+LD MQ++P   +L   V+
Sbjct: 82  WEETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVL 141

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V GA    IFA+       +       +  +P+++ E +RSF  +  Q  +
Sbjct: 142 FFGL---GTVPGAFATIIFAMP-----PVVRLTGLGIRQVPKNVIEAARSFGATPRQLLF 193

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +   +  ++      VV S MI  G       G+G  +   I +  +   
Sbjct: 194 KVQLPLALPTIQTGINQTIMMALSMVVVSAMISAG-------GLGEVVLKGITQMKIGLG 246

Query: 242 LYAMLTMLGVIFLYDQL 258
               + ++ +  + D++
Sbjct: 247 FEGGIAVVILAIILDRI 263



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 83/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F V   + + +AW  +G  +  FT   +L +  +G       T+  V+    +A
Sbjct: 40  ALYAIPFYVFIPLTVSLAWWKVGKGMGVFTLLGLLLIWGMGFWEETMQTLALVLSSTCMA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IP+GIW G     +  ++P    +   PA V+    V       +       +   
Sbjct: 100 LLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E A SF  T  +    + LP   P   TG       A
Sbjct: 158 --AMPPVVRLTGLGIRQVPKNVIEAARSFGATPRQLLFKVQLPLALPTIQTGINQTIMMA 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +VS + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVVSAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|316935677|ref|YP_004110659.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315603391|gb|ADU45926.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 277

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V  + A ++ + +G+  G+   +S  ++P  + L   P   + P+ +     
Sbjct: 82  GASLQRVAVGFLFACVVGLALGLLCGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGL 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + +             +    A       W+ +  +++P   
Sbjct: 142 GDA----ASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPASL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   + +E+ +        TGLG  I +S        VV G++ + 
Sbjct: 198 PIILPGLRIALGVGWMCVVTAELIA------AQTGLGYLIQQSRMLFQINNVVAGMVTIG 251

Query: 564 CFVLALNRFL 573
               A++  L
Sbjct: 252 LIGFAMSAIL 261



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 15/259 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLP 62
           Y ++    + R       L AF ++   I  L L        P  I + +       SL 
Sbjct: 19  YAMIQDIFAGRPMRAAVGLTAFFVIWQAITQLNLVDGFLLPSPVAIAEALWDLALDGSLW 78

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   +  R+    + + +       L    R +   + P+++ ++ IP L ++  T+++
Sbjct: 79  VHLGASLQRVAVGFLFACVVGLALGLLCGWWRTVSDYVRPVIEALRPIPPLAWIPITILW 138

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           + A+ F +F   V+ +  + Y ++  + R+    +       WQ F  
Sbjct: 139 FGLG--------DAASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTD 190

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+P ++  + +++  GW  VV +E+I          G+G  I  +     +  ++
Sbjct: 191 VLIPASLPIILPGLRIALGVGWMCVVTAELIAAQT------GLGYLIQQSRMLFQINNVV 244

Query: 243 YAMLTMLGVIFLYDQLLFR 261
             M+T+  + F    +L R
Sbjct: 245 AGMVTIGLIGFAMSAILER 263


>gi|218531725|ref|YP_002422541.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524028|gb|ACK84613.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 285

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 91/266 (34%), Gaps = 16/266 (6%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V         I   F  + L   +       L   WF     +    A+ +       
Sbjct: 14  REVAAPAPRRAGIGARFGASALDRLAPLLGLAGLLALWFAGGLVLESVPAYAAFAGFAPG 73

Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 + ++  G        ++ R+   + +A  +  P+G+ IG  P     +QP  QL
Sbjct: 74  PALASFVELLTSGEAWRAAAPSLARIGQGLAVAFGLGAPLGLLIGSVPLAERILQPPFQL 133

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       + P+ V     +       +  L+     W ILF   AG       +  +A 
Sbjct: 134 LRMISPLAWMPVAVLAFPSWDG----AIVFLIAAAAIWPILFATAAGVKRVDPVWLAMAR 189

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +         R +I+P +    +TG   A G AW   + +E          T+GLG  I 
Sbjct: 190 NLGAGRLAALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAIN 243

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  S+  +   VL++     AL+
Sbjct: 244 DARDTLSYDRLAALVLLIGLIGYALD 269



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 80/238 (33%), Gaps = 14/238 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F   + + ++  +       P   +      L      + A+ +  R+   + ++    
Sbjct: 51  WFAGGLVLESVPAYAAFAGFAPGPALASFVELLTSGEAWRAAAPSLARIGQGLAVAFGLG 110

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L         +L P   +++ I  L ++   V+ F           + A +F I 
Sbjct: 111 APLGLLIGSVPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +W + F+    +  +      ++R+           + VP  +  ++  + +++   
Sbjct: 163 AAAIWPILFATAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  +V +E + V        G+G  I  A        +   +L +  + +  D  L R
Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGLIGYALDTGLGR 274


>gi|332687053|ref|YP_004456827.1| glycine betaine ABC transporter permease OpuAB/ glycine betaine ABC
           transporter glycine betaine-binding protein OpuAC
           [Melissococcus plutonius ATCC 35311]
 gi|332371062|dbj|BAK22018.1| glycine betaine ABC transport system, permease protein OpuAB/
           glycine betaine ABC transport system, glycine
           betaine-binding protein OpuAC [Melissococcus plutonius
           ATCC 35311]
          Length = 293

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      T   +L +  IS++       L AK  ++  ++ PILD MQ++P   +L  
Sbjct: 85  QNLWPDLMDTLTLVLVSSFISIVIGVPLGILMAKYNKVQTIITPILDFMQTMPGFVYLIP 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +F     G V G   + IFA+  +  +         +  +P++L E S SF  + WQ
Sbjct: 145 AVAFFG---IGIVPGVFASIIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTNWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + L +P +   ++  +  +       VV + MI         PG+G  +  A++   +
Sbjct: 197 KLFKLELPLAKSTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
                  + ++ +  + D+ +
Sbjct: 250 GNGFVNGVALVILAIIIDRFV 270



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +                   +I   F Y   L+   +  +T+  V+V   I+ +I +
Sbjct: 53  FIVLLTIAAFIVSKKKFGLSLFTFIGLLFIYNQNLWPDLMDTLTL--VLVSSFISIVIGV 110

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +     + + I P    +   P  V+    V+      +       +        
Sbjct: 111 PLGILMAKYNKVQTIITPILDFMQTMPGFVYLIPAVAFFGIGIVPGVFASIIF----ALP 166

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P +  E + SF  T W+    + LP      + G       A +  +
Sbjct: 167 PTVRFTNLGIRQVPKELVEASDSFGSTNWQKLFKLELPLAKSTIMAGVNQTTMLALSMVV 226

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +           GLG  +  + ++       +  + +    + ++RF+
Sbjct: 227 IASMIG-------APGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRFV 270


>gi|300718729|ref|YP_003743532.1| taurine ABC transporter permease [Erwinia billingiae Eb661]
 gi|299064565|emb|CAX61685.1| Taurine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 275

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +R  +P       S   +  +L I+W      +   +      Q    ++   + Q  
Sbjct: 12  RRVRLRWPFGRQITLSAATLLVILAIWWGVTALKLIAPLFLPAPQQVFHQLLTIASSQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+++ +  A II +PVGI +G        + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S     W+  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIALIAFTLELGLRALQRRLTPW 270



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 101/254 (39%), Gaps = 22/254 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           L+   +  G+  + L        P+ +   +            +L Q+ + +  R+L A+
Sbjct: 32  LVILAIWWGVTALKLIAPLFLPAPQQVFHQLLTIASSQGFMDATLWQHLAASLTRILIAL 91

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             +++       L   S     +L P++++ + +P L +L   V++F           E 
Sbjct: 92  FAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ET 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +  S    + +  +     ++S   + WQ  W++ +P ++P ++  +
Sbjct: 144 SKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWFVILPGALPEILTGL 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F  +
Sbjct: 204 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIALIAFTLE 257

Query: 257 ---QLLFRPMIVWS 267
              + L R +  W 
Sbjct: 258 LGLRALQRRLTPWH 271


>gi|193212850|ref|YP_001998803.1| binding-protein-dependent transport systems inner membrane
           component [Chlorobaculum parvum NCIB 8327]
 gi|193086327|gb|ACF11603.1| binding-protein-dependent transport systems inner membrane
           component [Chlorobaculum parvum NCIB 8327]
          Length = 263

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I     ++ RV+  +++A I+ +P+G+ +G+   +        Q +       + P+
Sbjct: 66  GELIHHAIPSIRRVLTSLLLAIIVALPIGVLVGYFKRVEQLTYVVFQFMRMISPLAWMPI 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       ++    ++ L+     W ++ N   GA      +  ++ +         R 
Sbjct: 126 AIIIFGVGDVS----VTFLLWLVAIWPLILNTSHGAGRVSPLWVNMSRTMGAKDTGILRK 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  +TG   A G +W   + +E+           GLG +I ++ ++  + +++
Sbjct: 182 VIIPAAVPDMLTGLRLAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLM 235

Query: 557 LGVLIMCCFVLALN 570
             ++++      L+
Sbjct: 236 ATIMVIGAIGYLLD 249



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 93/239 (38%), Gaps = 17/239 (7%)

Query: 21  DLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +L F+ V  + ++         ++  P      +   +    L  +A  +  R+L++++
Sbjct: 25  GILLFLAVWQLASMFKLFGADFSDSFSPVAAFSALFEMIKSGELIHHAIPSIRRVLTSLL 84

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++       L    +R+  +   +   M+ I  L ++   ++ F           +++
Sbjct: 85  LAIIVALPIGVLVGYFKRVEQLTYVVFQFMRMISPLAWMPIAIIIFGVG--------DVS 136

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F ++   +W +  +       +      +SR+           + +P ++P ++  + 
Sbjct: 137 VTFLLWLVAIWPLILNTSHGAGRVSPLWVNMSRTMGAKDTGILRKVIIPAAVPDMLTGLR 196

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           +++   W  +V +EM+ V D      G+G +I           ++  ++ +  + +L D
Sbjct: 197 LAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMVIGAIGYLLD 249


>gi|319788744|ref|YP_004090059.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
 gi|315450611|gb|ADU24173.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
          Length = 253

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M+R  V   ++    + +G+ +G  P +   + P  QLL       + P +V       
Sbjct: 61  SMYRFAVGYSVSVATAVVLGLILGRIPRVFQYVNPALQLLRPISPTAWMPFIVLLFGIG- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              ++   +++     + +L + ++        + +V+ +F I        II P  FP 
Sbjct: 120 ---DVPAIVIIFIAAFFPVLLSTVSAVGNIDPIYFKVSKNFGIKQPALTWKIIFPAAFPQ 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   A G AW   +  E+          +GLG  I ++        ++  +L++   
Sbjct: 177 IANGIHLALGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILLATILVIGVI 230

Query: 566 VLALNRFL 573
            + L+  L
Sbjct: 231 GILLDGIL 238



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  +   +L+  ++  +  +       P+   D +   +    L +    +  R      
Sbjct: 11  VISIAILILIWQLLFTVSSYNEALFPSPKMAFDALVEMIQNGRLFENIKTSMYRFAVGYS 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S+    V   +  +  R+   + P L +++ I    ++ F V+ F           ++ 
Sbjct: 71  VSVATAVVLGLILGRIPRVFQYVNPALQLLRPISPTAWMPFIVLLFGIG--------DVP 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI  IF +  + +  S   ++ NI     +VS++F +      W +  P + P +   + 
Sbjct: 123 AIVIIFIAAFFPVLLSTVSAVGNIDPIYFKVSKNFGIKQPALTWKIIFPAAFPQIANGIH 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   W F+VA EM+          G+G  I  A        +L  +L +  +  L D 
Sbjct: 183 LALGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILLATILVIGVIGILLDG 236

Query: 258 LL 259
           +L
Sbjct: 237 IL 238


>gi|145297975|ref|YP_001140816.1| glycine betaine/L-proline transport system permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850747|gb|ABO89068.1| glycine betaine/L-proline transport system permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 383

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 16/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++G++ ++   +    +    + +  + + +      A  T   +L+++   +L     
Sbjct: 127 LMMGMLALIAWQMVNGRMALGTL-LSLVGIGLIGAWSDAMVTLSLVLNSLFFCILIGLPV 185

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             + A+S RL     P+LD MQ+ P   +L   V+ F     G V G  +  IFA     
Sbjct: 186 GIMLARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTVIFA----- 237

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  M       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++      
Sbjct: 238 LPPMIRLTMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSM 297

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI VG       G+G  +   I   D+       L ++ +  + D+L
Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 22/285 (7%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F + +        S +   V+ L     +IR           +   ++++L      ++
Sbjct: 75  PFQQALVPLDVWVESGIGWLVENLRPVFQLIRAPV------EVTLNAMTHLLQTVPSTLM 128

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIW 407
            G+   IAWQ +   +   T   ++ +  +G      +T+  V+  +    +I +PVGI 
Sbjct: 129 MGMLALIAWQMVNGRMALGTLLSLVGIGLIGAWSDAMVTLSLVLNSLFFCILIGLPVGIM 188

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     +S+  +P    +   PA V+   +V      ++   +   +         ++  
Sbjct: 189 LARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLFGIGNVPGVVVTVIF----ALPPMIRL 244

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G    P D  E A SF  +  +    + LP   P  + G       A +  +++ + 
Sbjct: 245 TMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMI 304

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + G       GLG  +     +       +G L +    + L+R 
Sbjct: 305 AVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342


>gi|88801194|ref|ZP_01116736.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
 gi|88776068|gb|EAR07301.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
          Length = 357

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 99/239 (41%), Gaps = 16/239 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F+ +  ++++ ++ +L   +    V      +    L      + +  T   ++++++  
Sbjct: 103 FNAVPPLMMVALLGLLAWQLSGRKVGI-WTVVGMFVLGAVGAWEESMTTLSLVVTSVLFC 161

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  I
Sbjct: 162 MVIGIPTGIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVMLFG---IGNVPGVVVTII 218

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  +P DL E + SF     Q  + + +P +MP ++  +  +
Sbjct: 219 FAVP-----PVIRLTNLGIRQVPEDLIEAANSFGADSKQMLFKVQLPLAMPTIMAGVNQT 273

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +  G   VV + MI VG       G+G  +   I   D+       + ++ +  + D++
Sbjct: 274 LMLGLSMVVIASMISVG-------GLGLMVLRGIGRLDIGLATVGGIGIVILAIILDRM 325



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 75/228 (32%), Gaps = 19/228 (8%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------TMFRVVVLIIIASIIWIPV 404
             +   +   +            V+ +  LG +        T+  VV  ++   +I IP 
Sbjct: 109 LMMVALLGLLAWQLSGRKVGIWTVVGMFVLGAVGAWEESMTTLSLVVTSVLFCMVIGIPT 168

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +      +  ++P    +   PA V+   VV          N+   ++ I      +
Sbjct: 169 GIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVMLFGIG----NVPGVVVTIIFAVPPV 224

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P D  E A+SF     +    + LP   P  + G         +  +++
Sbjct: 225 IRLTNLGIRQVPEDLIEAANSFGADSKQMLFKVQLPLAMPTIMAGVNQTLMLGLSMVVIA 284

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + S G       GLG  +     +       +G + +    + L+R 
Sbjct: 285 SMISVG-------GLGLMVLRGIGRLDIGLATVGGIGIVILAIILDRM 325


>gi|260869357|ref|YP_003235759.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O111:H- str. 11128]
 gi|257765713|dbj|BAI37208.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O111:H- str. 11128]
 gi|323180099|gb|EFZ65651.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1180]
          Length = 354

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +D       A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIDAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F QL         + +F         +G+   ++  ++           +    +    V
Sbjct: 97  FQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIDAIGAWSQAMVTLAL----V 152

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+
Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G 
Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A +  +++ + + G       GLG  +     +       +G + +    + L+
Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321

Query: 571 RF 572
           R 
Sbjct: 322 RL 323


>gi|283834315|ref|ZP_06354056.1| taurine uptake ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291069845|gb|EFE07954.1| taurine uptake ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 276

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 102/273 (37%), Gaps = 19/273 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFT 372
            R      + +P +     S   ++ +L ++W      +   +      Q +  ++    
Sbjct: 9   PRRPRAQYWRWPFSRQITLSLGTLAVILALWWMVAALQLISPLFLPPPGQVLQKLLTIAG 68

Query: 373 YQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            Q  +          ++ R+VV ++ A ++ IPVGI +G  P I   + P  +L    P 
Sbjct: 69  PQGFMDATLWQHLAASLTRIVVALLAAVLLGIPVGIAMGLSPTIRGILDPIIELYRPVPP 128

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL+V        +      LL+       +  + +AG  +        A S   + 
Sbjct: 129 LAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASR 184

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +   ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  
Sbjct: 185 AQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFL 238

Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +   V+ G+ ++      L    R L   L  +
Sbjct: 239 ATDVVLAGIAVIAVIAFILELGLRALQRRLTPW 271



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 101/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   L   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 34  VILALWWMVAALQLISPLFLPPPGQVLQKLLTIAGPQGFMDATLWQHLAASLTRIVVALL 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           S  +  +L PI+++ + +P L +L   V++F           E +
Sbjct: 94  AAVLLGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 146 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F+ + 
Sbjct: 206 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILEL 259

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 260 GLRALQRRLTPWH 272


>gi|30262879|ref|NP_845256.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Ames]
 gi|47528213|ref|YP_019562.1| sulfonate ABC transporter permease protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49185718|ref|YP_028970.1| sulfonate ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|65320194|ref|ZP_00393153.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165868596|ref|ZP_02213256.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167631771|ref|ZP_02390098.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167637819|ref|ZP_02396098.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170685175|ref|ZP_02876399.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|170704724|ref|ZP_02895190.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177649373|ref|ZP_02932375.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190565673|ref|ZP_03018593.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196032678|ref|ZP_03100092.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|227814276|ref|YP_002814285.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|228927963|ref|ZP_04091008.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229604457|ref|YP_002867170.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254685477|ref|ZP_05149337.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722884|ref|ZP_05184672.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A1055]
 gi|254737934|ref|ZP_05195637.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254742893|ref|ZP_05200578.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Kruger B]
 gi|254752248|ref|ZP_05204285.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Vollum]
 gi|254760765|ref|ZP_05212789.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Australia 94]
 gi|30257512|gb|AAP26742.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. Ames]
 gi|47503361|gb|AAT32037.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49179645|gb|AAT55021.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Sterne]
 gi|164715322|gb|EDR20839.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167514368|gb|EDR89735.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167532069|gb|EDR94705.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170130525|gb|EDS99386.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|170670535|gb|EDT21274.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|172084447|gb|EDT69505.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190563700|gb|EDV17665.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195995429|gb|EDX59383.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|227006521|gb|ACP16264.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|228831653|gb|EEM77245.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229268865|gb|ACQ50502.1| putative sulfonate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 282

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPATLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPATLPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280


>gi|282897797|ref|ZP_06305794.1| Nitrate transport permease [Raphidiopsis brookii D9]
 gi|281197281|gb|EFA72180.1| Nitrate transport permease [Raphidiopsis brookii D9]
          Length = 265

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           IV+ F   +   +      ++ RV+V ++IA  + +P+GI++G    +        QL+ 
Sbjct: 58  IVSLFQLFNSHSIFPHIFASLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVR 117

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                 + P+ V  +    L     +  L+     W ++ N  AG +A    +  ++ S 
Sbjct: 118 MISPLSWMPIAVMVLGIGDL----PVYFLLSISAIWAVILNTSAGVTAVDTQWLLLSKSL 173

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W     +I+P I P+ +TG   A G  W   + +E+           GLG +I ++
Sbjct: 174 CATKWETISQVIIPAIIPHLLTGIRLAMGVIWIVLVPAEMLG------VNAGLGYFILDT 227

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ ++ E+   ++I+      L+  L
Sbjct: 228 RDRLAYSELAAVIVIIGLIGYFLDAVL 254



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 78/204 (38%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            + HS+  +   +  R+L  ++I++             R L +    +  +++ I  L +
Sbjct: 65  FNSHSIFPHIFASLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVRMISPLSW 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+             +L   F +  S +W +  +    +  +      +S+S   +
Sbjct: 125 MPIAVMVLGIG--------DLPVYFLLSISAIWAVILNTSAGVTAVDTQWLLLSKSLCAT 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+    + +P  +P L+  + ++M   W  +V +EM+ V        G+G +I      
Sbjct: 177 KWETISQVIIPAIIPHLLTGIRLAMGVIWIVLVPAEMLGVNA------GLGYFILDTRDR 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                +   ++ +  + +  D +L
Sbjct: 231 LAYSELAAVIVIIGLIGYFLDAVL 254


>gi|254691563|ref|ZP_05154817.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 6 str. 870]
 gi|256256749|ref|ZP_05462285.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 9 str. C68]
 gi|260757191|ref|ZP_05869539.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260882998|ref|ZP_05894612.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|297250105|ref|ZP_06933806.1| ABC transporter permease [Brucella abortus bv. 5 str. B3196]
 gi|260677299|gb|EEX64120.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260872526|gb|EEX79595.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|297173974|gb|EFH33338.1| ABC transporter permease [Brucella abortus bv. 5 str. B3196]
          Length = 250

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G      S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGRYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L      
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242

Query: 577 LYLYGTR 583
           L  +  R
Sbjct: 243 LTQWQER 249



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 17/245 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  + R    ++ P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGRYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL    R + 
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244

Query: 265 VWSNK 269
            W  +
Sbjct: 245 QWQER 249


>gi|26986974|ref|NP_742399.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24981588|gb|AAN65863.1|AE016214_8 taurine ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 279

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 104/281 (37%), Gaps = 21/281 (7%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P++       R    +R      ++   +   ++ +L ++W     G    +   S G I
Sbjct: 7   PVAGKHNTQIRPAATLRRPLSTRWISTLT---LASLLMVWWLVTAAGWVEPLFLPSPGDI 63

Query: 368 VNH----FTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +       T   +   +W     ++ R+ + ++ A++  IPVGI IG+       + P  
Sbjct: 64  LAKAWTLLTQGYMDASLWQHLSASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLI 123

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +     P   + PL+V       L+      LL+       I      G           
Sbjct: 124 EFYRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRA 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A S   T  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  
Sbjct: 180 AQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 233

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +  + +      VVLG+L++     AL    R L   L  +
Sbjct: 234 VQSAAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 104/274 (37%), Gaps = 26/274 (9%)

Query: 6   ILPPFISRRIFPNIF----DLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVH- 59
           I P    RR     +     L + ++V  ++             P DI+      L    
Sbjct: 16  IRPAATLRRPLSTRWISTLTLASLLMVWWLVTAAGWVEPLFLPSPGDILAKAWTLLTQGY 75

Query: 60  ---SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL Q+ S +  R+  A+V + L           +R    +L P+++  + IP L +L
Sbjct: 76  MDASLWQHLSASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYL 135

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++            EL+ +  I+ +    +  +    +  +       ++S   + 
Sbjct: 136 PLIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATK 187

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +  
Sbjct: 188 AQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFL 241

Query: 237 DLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
               ++  +L +  + F  +   + L R ++ W 
Sbjct: 242 VTDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275


>gi|254228316|ref|ZP_04921743.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262394381|ref|YP_003286235.1| L-proline glycine betaine ABC transport system permease proW
           [Vibrio sp. Ex25]
 gi|151939122|gb|EDN57953.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262337975|gb|ACY51770.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
          Length = 363

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L+A+   LL         A+S+     + PILD MQ+ P   +L   V+ F 
Sbjct: 141 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 200

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P +L E   SF  +  Q  + + 
Sbjct: 201 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 252

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 253 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 305

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  L D++
Sbjct: 306 GLGIVILAILLDRI 319



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR           +    +    +     +
Sbjct: 52  PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 111

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                         +V    +  ++        T+  V+  +    +I +P+GIW+    
Sbjct: 112 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 170

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  ++P    +   PA V+   +V          N+   ++ I      ++   I G 
Sbjct: 171 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 226

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   SF     +    I LP   P  + G       + +  +++ + + G  
Sbjct: 227 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 284

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G L +    + L+R 
Sbjct: 285 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 319


>gi|169795525|ref|YP_001713318.1| putative binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AYE]
 gi|215483012|ref|YP_002325217.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|301344982|ref|ZP_07225723.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB056]
 gi|301513508|ref|ZP_07238745.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB058]
 gi|301597423|ref|ZP_07242431.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB059]
 gi|332850711|ref|ZP_08432958.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332866988|ref|ZP_08437305.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|169148452|emb|CAM86318.1| putative binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AYE]
 gi|213986297|gb|ACJ56596.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|332730548|gb|EGJ61864.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332734317|gb|EGJ65445.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
          Length = 279

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      ++A     S+     L P    ++SIP L
Sbjct: 72  LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ + L EV + +R
Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S+S  W F++A+E+I          GIG  ++   
Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWLLRWR 274



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV+   II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 79  LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238


>gi|157147033|ref|YP_001454352.1| taurine transporter subunit [Citrobacter koseri ATCC BAA-895]
 gi|157084238|gb|ABV13916.1| hypothetical protein CKO_02810 [Citrobacter koseri ATCC BAA-895]
          Length = 275

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 19/267 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLY 378
           +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  + 
Sbjct: 14  LKWRWPFSRRITLSISTLAVILAVWWSVAALQLISPLFLPPPGQVLQKLIAIAGPQGFMD 73

Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                    ++ R+++ ++ A II IPVGI +G  P I   + P  +L    P   + PL
Sbjct: 74  ATLWQHLAASLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPL 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V        +      LL+       +  + +AG  +        A S      +   +
Sbjct: 134 MVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWF 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVL 243

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580
            G+ ++      L    R L   L  +
Sbjct: 244 AGIAVIAVIAFILELGLRALQRRLTPW 270



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 103/267 (38%), Gaps = 22/267 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQ 63
           PF  R         +   +   +  + L        P  ++  +     P      +L Q
Sbjct: 19  PFSRRITLSISTLAVILAVWWSVAALQLISPLFLPPPGQVLQKLIAIAGPQGFMDATLWQ 78

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + +  R+L A++ +++           S  +  +L PI+++ + +P L +L   V++F
Sbjct: 79  HLAASLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWF 138

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E + I  I+ +    +  S    + +  +     ++S      Q  W++
Sbjct: 139 GIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWFV 190

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +      +L 
Sbjct: 191 ILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWS 267
            +  +  + F+ +   + L R +  W 
Sbjct: 245 GIAVIAVIAFILELGLRALQRRLTPWH 271


>gi|222102563|ref|YP_002539602.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
 gi|221739164|gb|ACM39897.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
          Length = 272

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 10/199 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++   +++ RVV+   I + + + +G+ +G  P     I+P    LA  P   + PL
Sbjct: 71  GELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPL 130

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V            +++  G    +  N  +G       ++E+  SF  + W+  R 
Sbjct: 131 LMLLVGIEET----LKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSPWQQLRL 186

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P   TG       AW + +  E+ +       + GLG  +    +      V+
Sbjct: 187 IVLPAAAPTIFTGIRYGLTNAWTSLVGVELLA------SSEGLGYLLVWGRQMFWLDTVI 240

Query: 557 LGVLIMCCFVLALNRFLWH 575
           + ++++      ++R L  
Sbjct: 241 VAMVVIGLVGFIMDRGLRR 259



 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              PR + +     +    L  +   +  R++    I          L   S R    + 
Sbjct: 54  LPAPRYVYETASNLIGDGELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIK 113

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  IP LG++   ++             E   I  I       +T + +  + N+
Sbjct: 114 PLFLALAQIPTLGWIPLLMLLVGIE--------ETLKIIIIAKGAFVPVTLNTFSGIRNV 165

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E+ RSFR S WQ+   + +P + P +   +   ++  W  +V  E++   +    
Sbjct: 166 SVKYREIGRSFRFSPWQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSE---- 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G  +    +   L  ++ AM+ +  V F+ D+ L R
Sbjct: 222 --GLGYLLVWGRQMFWLDTVIVAMVVIGLVGFIMDRGLRR 259


>gi|153808445|ref|ZP_01961113.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185]
 gi|149128767|gb|EDM19984.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185]
          Length = 275

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ + +    +      I  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYITILALAVAAWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 VVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +        AW   G     FT   +L +  +G       T+  V+    +
Sbjct: 39  HVLFGIPFYITILALAVAAWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ +P+GIW    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALVVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|254513156|ref|ZP_05125222.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221533155|gb|EEE36150.1| taurine ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 421

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV   I  ++I IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   + W+  R++I+P   P 
Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   + LR+++  +   L           S        PI++ M+ +P L  +   
Sbjct: 222 SLWQHLGWSLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   S WQ 
Sbjct: 282 IIWFGIWETGK--------IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQI 333

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|325264227|ref|ZP_08130959.1| taurine ABC transporter, permease protein [Clostridium sp. D5]
 gi|324030711|gb|EGB91994.1| taurine ABC transporter, permease protein [Clostridium sp. D5]
          Length = 263

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 15/249 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             PEN  ++           + W   V    +G        I+N F    V  +     +
Sbjct: 6   SLPENMQKIICGAISILGFLLLWQAAVSLTGLGKIMPGPAVILNAFFRSFVEEIAGYTVL 65

Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV+V  I+A ++ I +G+ +G    + +   PF +++   P   +  L +  
Sbjct: 66  GHIFWSLSRVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILW 125

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         ++   T   +  NV  G  A   +    A        + +  ++LP
Sbjct: 126 FGIG----ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLP 181

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY   G       +W A + +E+         + G+G  I    +  + P++ +G++
Sbjct: 182 ATVPYIFAGMQIGLSTSWAAVVAAEMVR------SSRGVGFLIVSGMDLNNIPQIFVGII 235

Query: 561 IMCCFVLAL 569
            +      L
Sbjct: 236 AIGLVGFLL 244



 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 103/251 (41%), Gaps = 18/251 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRT 68
           ++I      +L F+L+      L    +    P  I++    +       +++  +   +
Sbjct: 12  QKIICGAISILGFLLLWQAAVSLTGLGKIMPGPAVILNAFFRSFVEEIAGYTVLGHIFWS 71

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L   +++ L       L  + R +  +  P  ++++ IP + +++  +++F     
Sbjct: 72  LSRVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILWFGIG-- 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E    F IF +    +T ++Y+    + ++L   ++    +  Q FW + +P +
Sbjct: 130 ------ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLPAT 183

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   M + +S  W  VVA+EM+          G+G  I   +   ++  I   ++ +
Sbjct: 184 VPYIFAGMQIGLSTSWAAVVAAEMV------RSSRGVGFLIVSGMDLNNIPQIFVGIIAI 237

Query: 249 LGVIFLYDQLL 259
             V FL    +
Sbjct: 238 GLVGFLLATCM 248


>gi|297192568|ref|ZP_06909966.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151399|gb|EDY62016.2| glycine betaine ABC transporter integral membrane protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 681

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/509 (14%), Positives = 149/509 (29%), Gaps = 39/509 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRML 73
           N  D + +  V     +              V            +  +      T   M+
Sbjct: 125 NALDAMGWTGVFAAGVLFAWRAAGLGRSGVKVAATAFGAFAVCGLLGMWDATLLTIALMV 184

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  + L   +    A  S R+  +L P+LD MQ +P   +L   V+ F    P     
Sbjct: 185 VAVTCAALLGVLIGLAAGLSDRVDRLLRPVLDTMQVLPAFAYLLPFVLVFGTGTP----- 239

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AA+F         M       L      + E S S   + WQ+     +P +   ++
Sbjct: 240 ---AALFCTVIYAAPPMARLTTLGLRGADPAVLEASTSLGANAWQRLRTARLPLARKQML 296

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      VV + ++  G       G+G  +  A+   D+   L A + ++ +  
Sbjct: 297 LGLNQTIMMALSMVVIAALVGAG-------GLGEEVYSALSTVDVGKALAAGIPIVLIAV 349

Query: 254 LYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS--- 307
             D+        +   +    L      +      +       F+    +     F+   
Sbjct: 350 WLDRTTAAAGDRIGRSAPGGGLLHGRSGWALAGGGVAAAVLLRFVAGTSWPDGWTFAIST 409

Query: 308 -------PLSNNVKKLCRTLG---VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                   ++ N+      LG       HF    L    +   +         V     +
Sbjct: 410 PVNKAQVWITENLSSGIPVLGGTETWSEHFTLWVLNPMRDGLTALPWWAVLLLVAALAWL 469

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              W +            VL V      T+ +V+  +++   + +  GI       +   
Sbjct: 470 VGTWMTALTATLAMAAIGVLGVWTKSLDTLSQVLAALVVTLFLGVLAGILCARAGRLERW 529

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   P  V+   VV+      ++  +  +++        I      G      
Sbjct: 530 LRPVLDAMQTMPQFVYLIPVVALFGVARVS-AIVAAVVYALPAVVRI---TAQGLREVDP 585

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYY 506
              E + S   +  +    + LP   P  
Sbjct: 586 AALEASRSLGASTRQQLLRVQLPLARPAL 614



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T  ++L+A+V++L    +   L A++ RL   L P+LD MQ++P   +L   V  F 
Sbjct: 495 SLDTLSQVLAALVVTLFLGVLAGILCARAGRLERWLRPVLDAMQTMPQFVYLIPVVALFG 554

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    A ++AI A     +  +     Q L  +     E SRS   S  Q+   + 
Sbjct: 555 V--------ARVSAIVAAVVYALPAVVRITAQGLREVDPAALEASRSLGASTRQQLLRVQ 606

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P L   +   +      VV   ++  G            +   +   ++   + A
Sbjct: 607 LPLARPALQLAVNQGVVLVLAVVVVGALVGGGALGYD-------VVKGLSRGEMGLGMTA 659

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 660 GVAIVCLGLVLDRI 673


>gi|84394016|ref|ZP_00992754.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio splendidus 12B01]
 gi|84375353|gb|EAP92262.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio splendidus 12B01]
          Length = 364

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVHSLPQYASRTTLRMLSAMVISL 80
           L++      +I + L   Q + +   +   V +T + +      A  T   +++++   L
Sbjct: 98  LVSTPAPFMLIILFLVAWQFSNLKLGVATAVSLTMIGLIGAWSEAMTTLSLVMTSVFFCL 157

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E   SF  S  Q  + + +P ++P ++  +  ++
Sbjct: 215 A-----LPPVVRLTILGIQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 14/281 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR   P +F+       +      F   ++
Sbjct: 53  PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110

Query: 353 CGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             VA   +   +G       T   ++        T+  V+  +    +I +P+GIW+   
Sbjct: 111 FLVAWQFSNLKLGVATAVSLTMIGLIGAWSEAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              +  ++P    +   PA V+   +V          N+   ++ I      ++   I G
Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P D  E   SF  +  +    I LP   P  + G       + +  +++ + + G 
Sbjct: 227 IQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +     +       +G L +    + L+R 
Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320


>gi|225619374|ref|YP_002720600.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira
           hyodysenteriae WA1]
 gi|225214193|gb|ACN82927.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           componen [Brachyspira hyodysenteriae WA1]
          Length = 278

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++   +    + + I IP+GI + +    +    P   L+   P   +
Sbjct: 79  PDNGTLFQHILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAW 138

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++              S ++        + N  +G  A       VA +F  +  + 
Sbjct: 139 IPMMILWFGIGLG----AKSAIVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRRQM 194

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            + + +P   PY  TG   + G +W +   +E+ +       + GLG  I  + +     
Sbjct: 195 LKEVAIPTALPYIFTGLRVSLGSSWTSLCAAEMLA------ASRGLGFMIQLNRQLARAD 248

Query: 554 EVVLGVLIMCCFVLAL 569
            +++G+L +      L
Sbjct: 249 LIIVGMLTIGAVGAIL 264



 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 21/251 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGII--NILLHGIQETTVPRDIVDIVPITL-----DVHSLPQY 64
           S+    ++  ++ F+++  +I     L        P  +       L     D  +L Q+
Sbjct: 28  SKFFIISVISVVVFLIIWQLITDVFKLFPSYSLPSPYTVFKSFIYKLTNKAPDNGTLFQH 87

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +    L+   +            A  ++  +V  P+ D+++ IP + ++   +++F 
Sbjct: 88  ILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAWIPMMILWFG 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                K           +F S       + Y  +    +    V+++F  S  Q    + 
Sbjct: 148 IGLGAKSA--------IVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRRQMLKEVA 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +S+   W  + A+EM+          G+G  I L  +      I+  
Sbjct: 200 IPTALPYIFTGLRVSLGSSWTSLCAAEMLAAS------RGLGFMIQLNRQLARADLIIVG 253

Query: 245 MLTMLGVIFLY 255
           MLT+  V  + 
Sbjct: 254 MLTIGAVGAIL 264


>gi|167573338|ref|ZP_02366212.1| taurine ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 285

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 14/283 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
                     K  R     R H             V        F  V    +      +
Sbjct: 13  ALPAAGTGSDKAPRERRRPRVHAGHAAAIATWAALVGGWWLAARFEWVSAALLPSPEAVL 72

Query: 365 GYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             +V   T   D   +      ++ R+     +A    IPVGI I     +   + P  +
Sbjct: 73  RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P   + PL+V        +      LL+       +     AGA+         A
Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDTSK----ILLIYLTMFAPLTIATAAGANGVSASRLRAA 188

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           +S   T ++  R+++LP   P  +TG   A G  W+  + +E+ +       T GLG  +
Sbjct: 189 ASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMV 242

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             ++       VV G+L++    LAL    R L   L  +   
Sbjct: 243 YSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPWRAE 285



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 92/224 (41%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           R +V +     D  +L Q+   +  RM +A  +++        L A +R +  V+ PI++
Sbjct: 73  RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + IP L +L   VV+F      K        I  I+ +    +T +       +    
Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDTSK--------ILLIYLTMFAPLTIATAAGANGVSASR 184

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              + S   + ++   ++ +P ++P ++  + +++  GW  +VA+E+I          G+
Sbjct: 185 LRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           G  +  A +      ++  +L +  +    +   + L R +  W
Sbjct: 239 GFMVYSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|148265891|ref|YP_001232597.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
 gi|146399391|gb|ABQ28024.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
          Length = 289

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ R +    +A ++ +P+G  +G    +        Q L   P     P+
Sbjct: 88  GELFGHIGVSLQRALTGFFLAVVVAVPLGFLMGRYSRLEKIADLMIQGLRNTPHFALLPV 147

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +     +       +      W+IL N I+G       + + A S   +    +  
Sbjct: 148 FIMVLGIGESSK----IAITFLAAVWFILINTISGVKCVDPLYLKAAKSMGTSDTDLFIK 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  V+GA      +  A I +E+ +        +GLG +I  S      PE+ 
Sbjct: 204 VILPASIPSIVSGARLGVKSSLMAVIGAEMLA------AKSGLGFFIQNSHLMYRIPEMY 257

Query: 557 LGVLIMCCFVLALNRFL 573
            G+L +  F L +N  L
Sbjct: 258 AGILALAIFGLLINYLL 274



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R L+   ++++       L  +  RL  +   ++  +++ P    L  
Sbjct: 88  GELFGHIGVSLQRALTGFFLAVVVAVPLGFLMGRYSRLEKIADLMIQGLRNTPHFALLPV 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++             E + I   F + VW +  +    +  +     + ++S   S   
Sbjct: 148 FIMVLGIG--------ESSKIAITFLAAVWFILINTISGVKCVDPLYLKAAKSMGTSDTD 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S+P +V    + +      V+ +EM+          G+G +I  +     +
Sbjct: 200 LFIKVILPASIPSIVSGARLGVKSSLMAVIGAEMLAAKS------GLGFFIQNSHLMYRI 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +   +L +     L + LL
Sbjct: 254 PEMYAGILALAIFGLLINYLL 274


>gi|94500530|ref|ZP_01307061.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94427320|gb|EAT12299.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 313

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +++++   +L         ++S +   ++ PILD MQ+ P   +L   V+ F 
Sbjct: 125 AMTTLSLVITSLFFCILIGLPMGIWLSRSDKAVSIVRPILDAMQTTPAFVYLIPIVMLFS 184

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PGKV G  +  IFA+       M       +  +P DL E +R+F  S  Q  + + 
Sbjct: 185 ---PGKVAGVIVTIIFAVP-----PMIRLTNLGIRQVPEDLIEAARAFGTSPKQLLFKVQ 236

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++  G   VV + MI V       PG+G  +   I   D+      
Sbjct: 237 LPLALPTIMAGVNQTLMLGLSMVVIASMIAV-------PGLGLMVLQGIGRNDIGIATVG 289

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 290 GLGIVILAIILDRI 303



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 88/279 (31%), Gaps = 30/279 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +  +         P++  +  +   L VI        L   + +  +  + I     + 
Sbjct: 55  IVPVLRPVFQVIAQPITWFLNAIESLLLVIPAPLIIIALAALAWKLSNRRIGIATLFGLL 114

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            + +  AW                        T+  V+  +    +I +P+GIW+     
Sbjct: 115 AIGLIGAWD-------------------QAMTTLSLVITSLFFCILIGLPMGIWLSRSDK 155

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             S ++P    +   PA V+   +V   S       +   ++ I      ++     G  
Sbjct: 156 AVSIVRPILDAMQTTPAFVYLIPIVMLFSPG----KVAGVIVTIIFAVPPMIRLTNLGIR 211

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A +F  +  +    + LP   P  + G         +  +++ + +     
Sbjct: 212 QVPEDLIEAARAFGTSPKQLLFKVQLPLALPTIMAGVNQTLMLGLSMVVIASMIA----- 266

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  + +   +       +G L +    + L+R 
Sbjct: 267 --VPGLGLMVLQGIGRNDIGIATVGGLGIVILAIILDRI 303


>gi|152969527|ref|YP_001334636.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238893997|ref|YP_002918731.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262040961|ref|ZP_06014183.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330013856|ref|ZP_08307813.1| putative aliphatic sulfonates transport permease protein SsuC
           [Klebsiella sp. MS 92-3]
 gi|150954376|gb|ABR76406.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238546313|dbj|BAH62664.1| putative aliphatic sulfonates transporter permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259041655|gb|EEW42704.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328533327|gb|EGF60074.1| putative aliphatic sulfonates transport permease protein SsuC
           [Klebsiella sp. MS 92-3]
          Length = 263

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 107/259 (41%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V+V  + + +     +    P  ++           L Q+ + ++ R L    I   
Sbjct: 19  VGTVIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   ++  SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ETAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++  +  ++ 
Sbjct: 131 VSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSVMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 LMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W+  + L+    
Sbjct: 245 LERLWLRWNPAYHLQEANA 263



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 86/249 (34%), Gaps = 26/249 (10%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            +V  +A  + W S   + +         T      +     I+ +R +V   I   I +
Sbjct: 22  VIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGSIGL 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+  G        +    Q+L   P     PLV+                L+  GT +
Sbjct: 82  ILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DETAKIFLVSLGTLF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G         E+A S+ ++G+  +R++ILPG  P  + G   A G  W   I
Sbjct: 138 PIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSVMVGVRFALGLMWLTLI 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFL-- 573
           V+E  S         G+G     + E      VV+ +++              L R    
Sbjct: 198 VAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQLLERLWLR 251

Query: 574 WHPLYLYGT 582
           W+P Y    
Sbjct: 252 WNPAYHLQE 260


>gi|238750477|ref|ZP_04611978.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia rohdei ATCC 43380]
 gi|238711408|gb|EEQ03625.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia rohdei ATCC 43380]
          Length = 367

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  + +        A  T   +L+++   +
Sbjct: 102 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 219 ALP-----PIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 324



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + +I       F  +   V  +      +    P           
Sbjct: 64  PLDSWV------THGIDWIVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  +V           +    +T+  V+  +    +
Sbjct: 110 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+    + +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G    P D  E A SF     +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 324


>gi|332800284|ref|YP_004461783.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332698019|gb|AEE92476.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 282

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +L+++++ +L         A + +  ++L PILD MQ++P   +L   
Sbjct: 88  GLWDEMLFTLSIVLTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPSFVYLIPA 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F            + A+FA               ++ N+P ++ E + SF  S WQ 
Sbjct: 148 MIFFGLG--------TVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSRWQT 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P +MP ++  +  +       VV S MI          G+G  + +AI   D+ 
Sbjct: 200 LIKVELPQAMPTIMAGINQTTMMAMSMVVISSMI-------GAKGLGENVLIAINRSDIA 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
               + ++++ +  + D++
Sbjct: 253 MGFNSGISIVFLAIIIDRI 271



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 11/202 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T   +L +      T+  V+  +I+  +I +P+GI+  +       + P    +   P+
Sbjct: 81  ITLIGLLGLWDEMLFTLSIVLTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPS 140

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+    +           +      I  +    +          P + +E A SF  + 
Sbjct: 141 FVYLIPAMIFFGLG----TVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSR 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    + LP   P  + G       A +  ++S +           GLG  +  +  + 
Sbjct: 197 WQTLIKVELPQAMPTIMAGINQTTMMAMSMVVISSMIG-------AKGLGENVLIAINRS 249

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
                    + +    + ++R 
Sbjct: 250 DIAMGFNSGISIVFLAIIIDRI 271


>gi|325264908|ref|ZP_08131636.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp.
           D5]
 gi|324029897|gb|EGB91184.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp.
           D5]
          Length = 268

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 11/216 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           + +  + +    F        +W   I ++ RV     +A++  + +G   G  P     
Sbjct: 44  LLYVLVDFATGQFEITPYSGTLWGHLIHSLKRVASGFGLAAVCGLILGFLSGGIPIARRL 103

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P   L+   P   + P+ +        N       L+   + + I  N + G S  P 
Sbjct: 104 VDPLIHLVRTVPGIGWLPVAIVWFGIGEGN----TLFLIALASFFPIYINTVHGTSQVPE 159

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                       G+  +R +ILP  FP    G     G AW   ++ E      +   T 
Sbjct: 160 VTLRAGRMLGAKGFALFRTVILPAAFPDVAVGLRLGLGVAWAYLVLGE------VTGVTE 213

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLGA + +    G    V+  ++++ C     +  L
Sbjct: 214 GLGAVMTDGRMLGHVDIVLATMIVIACAGKLTDVLL 249



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   +  R+ S   ++ +   +   L+        ++ P++ +++++P +G+L  
Sbjct: 63  GTLWGHLIHSLKRVASGFGLAAVCGLILGFLSGGIPIARRLVDPLIHLVRTVPGIGWLPV 122

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F               +F I  +  + +  +       +P       R     G+ 
Sbjct: 123 AIVWFGIGEGN--------TLFLIALASFFPIYINTVHGTSQVPEVTLRAGRMLGAKGFA 174

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +   W ++V      +G+      G+G+ +        +
Sbjct: 175 LFRTVILPAAFPDVAVGLRLGLGVAWAYLV------LGEVTGVTEGLGAVMTDGRMLGHV 228

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  M+ +     L D LL
Sbjct: 229 DIVLATMIVIACAGKLTDVLL 249


>gi|294339047|emb|CAZ87396.1| Glycine betaine transport system permease protein opuAB [Thiomonas
           sp. 3As]
          Length = 286

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L+A V+ +L       L+AKSR L   L P+LDIMQ++P   +L   V++F 
Sbjct: 96  LIKTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLRPVLDIMQTMPAFVYLVPAVIFFG 155

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     IFA     +  +       +  +P +L E ++SF  + WQ    + 
Sbjct: 156 L---GLVPGVISTTIFA-----LPPLIRLTTLGIRQVPHELVEATQSFGATWWQLLTKVQ 207

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  S+  G   VV S MI  G       G+G+ +   I + D+      
Sbjct: 208 IPSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GLGNVVLEGITQLDVGKGFVG 260

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D+L
Sbjct: 261 GLCVVILAIILDRL 274



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 11/213 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W    + V        L        T+  V+   ++  +I +P GI       +   ++
Sbjct: 73  GWSLAIFSVLGLGLVWNLGYWDDLIKTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLR 132

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   PA V+    V       +   +  ++         ++     G    P++ 
Sbjct: 133 PVLDIMQTMPAFVYLVPAVIFFGLGLVPGVISTTIF----ALPPLIRLTTLGIRQVPHEL 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E   SF  T W+    + +P   P  + G   +     +  ++S +   G       GL
Sbjct: 189 VEATQSFGATWWQLLTKVQIPSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GL 241

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  + E   +    +  +G L +    + L+R 
Sbjct: 242 GNVVLEGITQLDVGKGFVGGLCVVILAIILDRL 274


>gi|59711393|ref|YP_204169.1| glycine betaine transporter subunit [Vibrio fischeri ES114]
 gi|59479494|gb|AAW85281.1| glycine betaine transporter subunit [Vibrio fischeri ES114]
          Length = 360

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           L++      ++ + L   Q + +   +   + +    +      A  T   +++++   L
Sbjct: 95  LVSTPAPFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCL 154

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+SR     + PILD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 155 LIGLPMGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 211

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E   SF  +  Q  + + +P ++P ++  +  ++
Sbjct: 212 A-----LPPVVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTL 266

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 267 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             F ++    +   + ++   V+      +  ++        T+  V+  +    +I +P
Sbjct: 100 APFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCLLIGLP 159

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW+      +  I+P    +   PA V+   +V          N+   ++ I      
Sbjct: 160 MGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPP 215

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   I G    P D  E   SF     +    I LP   P  + G       + +  ++
Sbjct: 216 VVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVI 275

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 276 ASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|222053468|ref|YP_002535830.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221562757|gb|ACM18729.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 255

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +       D+  +     I++ R     ++A +  IP+G+++G        I P  Q+
Sbjct: 42  DVVRAIVELADMGTLWSHMGISLARFGAAYLLAVLAGIPLGLFLGRFIRCHKAIDPLIQV 101

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       +FPL V          N     ++   + + +L   I+   A P  + +VA 
Sbjct: 102 LRPISPIAWFPLAVLWFGIG----NAPAVFIIFLASFYPVLLATISAVRAVPPVYLKVAG 157

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F       +  +I+P  FP  + G   A G  W   +  E+          +GLG  I 
Sbjct: 158 NFGARADMTFLRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIV 211

Query: 545 ESTEKGSFPEVVL 557
           ++       +++ 
Sbjct: 212 DARNFLRTDQIMA 224



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 93/230 (40%), Gaps = 15/230 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  L+AF L+  +        ++   P D+V  +    D+ +L  +   +  R  
Sbjct: 10  RLALPLTSLIAFTLLWQVAARRYP-PEQFPAPSDVVRAIVELADMGTLWSHMGISLARFG 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A ++++L          +  R    + P++ +++ I  + +    V++F          
Sbjct: 69  AAYLLAVLAGIPLGLFLGRFIRCHKAIDPLIQVLRPISPIAWFPLAVLWFGIG------- 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A+F IF +  + +  +   ++  +P    +V+ +F       F  + VP + PG++
Sbjct: 122 -NAPAVFIIFLASFYPVLLATISAVRAVPPVYLKVAGNFGARADMTFLRVIVPAAFPGIM 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             + +++  GW  +VA EM+          G+G  I  A        I+ 
Sbjct: 181 VGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIVDARNFLRTDQIMA 224


>gi|91776909|ref|YP_546665.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91710896|gb|ABE50824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 283

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 92/268 (34%), Gaps = 17/268 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIG 365
                +  R         P N   L         L I+W   + G+          + + 
Sbjct: 15  GKPSAQQARKRLWAVRGGPGNHEFLVRCLGFMIPLAIWWAASLSGLIPETFLPDPPKVLK 74

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            ++   + +      W   I+  RV    ++A+++ +P+G+  G    +   I+P    +
Sbjct: 75  RLLLWISDEGFGQDFW---ISFVRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFI 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA  F PLV+        +       L+  GT + ++  +       P    E A +
Sbjct: 132 RYMPAVAFVPLVLLWCGVGEASK----IALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQT 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T       +ILP   P  +       G AW   +V+E+ +         GLG  I  
Sbjct: 188 MGATRRELLFKVILPSAAPALLDTIRVTLGWAWTYLVVAELVA------ANEGLGYAILR 241

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       ++  G+L++    L  ++ L
Sbjct: 242 AQRFLLTDKIFAGILVIGLIGLIQDQLL 269



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 85/192 (44%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R+ S  +++ +       LA   RR+ + + P++D ++ +P + F+   +++     
Sbjct: 92  SFVRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFIRYMPAVAFVPLVLLWCGVG- 150

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E + I  IF    + M   M  ++  +P    E +++   +  +  + + +P 
Sbjct: 151 -------EASKIALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQTMGATRRELLFKVILPS 203

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L+  + +++   W ++V +E++   +      G+G  I  A +      I   +L 
Sbjct: 204 AAPALLDTIRVTLGWAWTYLVVAELVAANE------GLGYAILRAQRFLLTDKIFAGILV 257

Query: 248 MLGVIFLYDQLL 259
           +  +  + DQLL
Sbjct: 258 IGLIGLIQDQLL 269


>gi|197334765|ref|YP_002155547.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio fischeri MJ11]
 gi|197316255|gb|ACH65702.1| glycine betaine/L-proline transport system permease protein ProW
           [Vibrio fischeri MJ11]
          Length = 360

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           L++      ++ + L   Q + +   +   + +    +      A  T   +++++   L
Sbjct: 95  LVSTPAPFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCL 154

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+SR     + PILD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 155 LIGLPMGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 211

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E   SF  +  Q  + + +P ++P ++  +  ++
Sbjct: 212 A-----LPPVVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTL 266

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 267 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             F ++    +   + ++   V+      +  ++        T+  V+  +    +I +P
Sbjct: 100 APFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCLLIGLP 159

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW+      +  I+P    +   PA V+   +V          N+   ++ I      
Sbjct: 160 MGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPP 215

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   I G    P D  E   SF     +    I LP   P  + G       + +  ++
Sbjct: 216 VVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVI 275

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 276 ASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317


>gi|238788929|ref|ZP_04632719.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
 gi|238722956|gb|EEQ14606.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
          Length = 290

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 95/270 (35%), Gaps = 33/270 (12%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDVLYVIWLGCI------ 385
                R   +   FW  +   V++ + W ++  +  ++         V+    +      
Sbjct: 26  RPKTSRRLPVAKGFWLSIATVVSVILLWWTVTALQLISPLFLPAPQQVLHQLLVIASPQG 85

Query: 386 ------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                       ++ R++V ++ A  + +P GI +G    +   + P  ++    P   +
Sbjct: 86  FMDATLWQHLAASLGRILVALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAY 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V        +      LL+       I    +AG  +        A +   + W+ 
Sbjct: 146 LPLMVIWFGIGETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASHWQV 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             ++ILP   P  +TG     G  W+  + +E+ +       T GLG  +  + E  +  
Sbjct: 202 LWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATD 255

Query: 554 EVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            V+ G+ ++      +    R +   L  +
Sbjct: 256 VVIAGISVIAIIAFGMELSLRAIQRRLTPW 285



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V  + +I+ L     +  + + +V   P      +L Q+ + +  R+L A++ ++ 
Sbjct: 52  LWWTVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILVALLAAVA 111

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  VL P+++I + +P L +L   V++F           E + I  
Sbjct: 112 LGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 163

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++  + + + 
Sbjct: 164 IYLAIFAPITLAAVAGVRSVAQVRVRAARALGASHWQVLWFVILPSALPEILTGIRIGLG 223

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
            GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   L  + 
Sbjct: 224 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 277

Query: 259 LFRPMIVW 266
           + R +  W
Sbjct: 278 IQRRLTPW 285


>gi|262373174|ref|ZP_06066453.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
 gi|262313199|gb|EEY94284.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
          Length = 293

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ ++ A  I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 99  AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +TG     G  W+  + SE+ +         G+G  +  + +      VVLG++++ 
Sbjct: 215 SHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 269 IVAVSFELFL 278



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 91/211 (43%), Gaps = 14/211 (6%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +++        +L Q+ + +  R+L A+V ++            ++ +  VL P++++++
Sbjct: 82  LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            IP L +L   V++F           E   +  IF S +  +  S    + +   + E  
Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + S   S  Q FW++ +P ++  ++  + + +  GW  +VASE++          GIG  
Sbjct: 194 ALSLGASQSQVFWHVILPTALSHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  A +      ++  ++ +  V   ++  L
Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278


>gi|167041162|gb|ABZ05921.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_001B09]
 gi|167041912|gb|ABZ06651.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_133I24]
          Length = 719

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 94/565 (16%), Positives = 184/565 (32%), Gaps = 61/565 (10%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
             I  I + V    + +  T   +L A  IS L        + +S+R+   L PIL++MQ
Sbjct: 184 AAITMIYISVFGQWKPSMETLSFVLVAAPISFLLGLALGIWSYRSKRIEAALNPILNVMQ 243

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           ++P   ++   +V F     G   GA    IFA        M       L  +  ++ + 
Sbjct: 244 TMPHYSYIVVIMVMFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQA 295

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            +    + +Q  + + +P +   ++  +          ++    + V  + I   G+G  
Sbjct: 296 GKMSGCNEFQLLFKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGWN 348

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           + LA+ +  +   L A + +  +  L D++     + W++K         +         
Sbjct: 349 LLLALNQLRIGLALEAGICISLIAVLLDKMS----LAWAHKQTDYFANLNFLQRHKYGLF 404

Query: 289 FRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL---- 334
           F     +  I  S  +F+           P +  +         + + +   F QL    
Sbjct: 405 FVGAVIVGLIFASFGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIFN 464

Query: 335 ---------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGC 384
                            M  +  F +V G    I       +V  FT    L   W    
Sbjct: 465 TWLIVDVLQPMRAAYLRMPIVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRAL 524

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T +     +I + II +  G         +         L  FP+ V+   V+      
Sbjct: 525 VTAYMATFGVIASGIIGVISGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGIT 584

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  + + +        Y     I G  + P    + AS   +T  +    I  P  FP
Sbjct: 585 DTSVLIAVIIYATIPATRY----TIEGLRSVPPALHDAASMSGVTRLQRLFQIDFPLAFP 640

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GSFPEVVLGVLIM 562
           + + G       A    I+               LG YI ++     G    ++LG+ + 
Sbjct: 641 HIMLGINQTVVFALFMVIIGAFIGTED-------LGQYIMKALSDLKGGGKALILGLCV- 692

Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587
               LA++  +      +  +  +L
Sbjct: 693 AFIGLAVDNLIR----TWANKRKKL 713


>gi|170750957|ref|YP_001757217.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170657479|gb|ACB26534.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 286

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 13/201 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV     +A+   +P+G+ IG  P I + + P  Q+L   P   + PL +     
Sbjct: 92  AASLSRVYGGFALAAAAALPLGLLIGRVPLIRALLDPALQVLRPVPVTAWLPLAMILFGL 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G  + IL N + G  +      E A+    TG   +  ++LP   
Sbjct: 152 GPRS----AFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPAQFVRVVLPAAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G AW   +V E+          TGLGA I E+ +      V+ G+ ++ 
Sbjct: 208 PSIFTGLRLGLGFAWVVIVVGEM------TGVQTGLGAIIMEARQLSRTEIVICGMAVIG 261

Query: 564 CFVLALNRFLW---HPLYLYG 581
                 +  +      L  + 
Sbjct: 262 VAGFVSDWLVMQLSRRLLAWS 282



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  + + +  R+     ++         L  +   +  +L P L +++ +P+  +L  
Sbjct: 85  GTLWTHLAASLSRVYGGFALAAAAALPLGLLIGRVPLIRALLDPALQVLRPVPVTAWLPL 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             +A F +F    + +  +    + ++   L E +     +G  
Sbjct: 145 AMILFGLG--------PRSAFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPA 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +F  + +P ++P +   + + +   W  +V  EM  V        G+G+ I  A +    
Sbjct: 197 QFVRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVQT------GLGAIIMEARQLSRT 250

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M  +    F+ D L+    R ++ WS 
Sbjct: 251 EIVICGMAVIGVAGFVSDWLVMQLSRRLLAWSP 283


>gi|227494339|ref|ZP_03924655.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces coleocanis
           DSM 15436]
 gi|226832073|gb|EEH64456.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces coleocanis
           DSM 15436]
          Length = 270

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 18/233 (7%)

Query: 349 FCVVCGVAIGIAWQSIG------YIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASII 400
             VV G+AI     +IG        V +  Y  +   IW+     ++ RV+    + + +
Sbjct: 34  VSVVGGIAIWWILATIGINLPTPLEVANRFYGMIANGIWITDTLASLARVLTGFAMGTAL 93

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IPVG  +G+        +P+ Q     P     PL +  +             ++    
Sbjct: 94  AIPVGFLMGWYVPARGIFEPWIQFFRTVPPLAIIPLAIVLMGIG----EQPKIFVIFLAA 149

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               + +   G           A        R +  +++P   P+ + G     G AW  
Sbjct: 150 FLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFILVGMRVGLGSAWAT 209

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +E+ +       + GLG  +  +      P + + ++ +  F L ++R L
Sbjct: 210 VVAAELIA------ASVGLGYRMQNAQIYYDMPTIFVSLITIGVFGLFMDRIL 256



 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 17/252 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++++ V  I I  IL         P ++ +     +           +  R+L+   +  
Sbjct: 32  NIVSVVGGIAIWWILATIGINLPTPLEVANRFYGMIANGIWITDTLASLARVLTGFAMGT 91

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L         +  P +   +++P L  +   +V             E   IF
Sbjct: 92  ALAIPVGFLMGWYVPARGIFEPWIQFFRTVPPLAIIPLAIVLMGIG--------EQPKIF 143

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +   +   S +Q + N+ + L   +R       + F  + VP S P ++  M + +
Sbjct: 144 VIFLAAFLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFILVGMRVGL 203

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W  VVA+E+I          G+G  +  A    D+  I  +++T+       D++L 
Sbjct: 204 GSAWATVVAAELIAASV------GLGYRMQNAQIYYDMPTIFVSLITIGVFGLFMDRILL 257

Query: 261 ---RPMIVWSNK 269
                +  W  +
Sbjct: 258 FAENKLTGWQER 269


>gi|298675885|ref|YP_003727635.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298288873|gb|ADI74839.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 260

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 10/213 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
              + +  +  +   +     I++    + +I A +I IPVGI +G+   ++    P  +
Sbjct: 42  FDVVTSFISTVESGTLFIDFSISLMHFGIGVIAALLIGIPVGIVMGWFKTVNRISDPIIE 101

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   P   + P  +  +   H         ++  G  + I+ N   G  + P    E A
Sbjct: 102 ILRPIPPLAWIPFALVWLGLTHT----AAGFVIFVGAVFPIIINTYTGFKSVPKINVEAA 157

Query: 484 SSFH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
                +      R+I  P   P    G     G  W   + +E        +   GLG  
Sbjct: 158 KVLGCVKQRSLIRHIAFPSSLPSITAGIRIGMGVGWMCLVAAEFFG-----VSKNGLGYK 212

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +           V++ + ++    L +++    
Sbjct: 213 LWWHYGLHQMDFVLMYMFMLGILGLIIDKVFRK 245



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 101/255 (39%), Gaps = 15/255 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++++  P I  L+  V +  I+   ++          D+V     T++  +L    S + 
Sbjct: 6   VAQKNAPEITSLIVAVTLWQIVAEYIIRRELLLPSFFDVVTSFISTVESGTLFIDFSISL 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +     ++ +LL       +    + +  +  PI++I++ IP L ++ F +V+       
Sbjct: 66  MHFGIGVIAALLIGIPVGIVMGWFKTVNRISDPIIEILRPIPPLAWIPFALVWLGL---- 121

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFS 188
                  AA F IF   V+ +  + Y    ++P+   E ++            ++  P S
Sbjct: 122 ----THTAAGFVIFVGAVFPIIINTYTGFKSVPKINVEAAKVLGCVKQRSLIRHIAFPSS 177

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + + M  GW  +VA+E   V        G+G  +        +  +L  M  +
Sbjct: 178 LPSITAGIRIGMGVGWMCLVAAEFFGVSKN-----GLGYKLWWHYGLHQMDFVLMYMFML 232

Query: 249 LGVIFLYDQLLFRPM 263
             +  + D++  + +
Sbjct: 233 GILGLIIDKVFRKYI 247


>gi|167566227|ref|ZP_02359143.1| taurine ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
          Length = 285

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 14/283 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
                     K  R     R H             V        F  V    +      +
Sbjct: 13  ALPAAGTGSDKAPRERRRPRVHAGHAAAIATWAALVGGWWLAARFEWVSAALLPSPEAVL 72

Query: 365 GYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             +V   T   D   +      ++ R+     +A    IPVGI I     +   + P  +
Sbjct: 73  RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P   + PL+V        +      LL+       +     AGA+         A
Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDASK----ILLIYLTMFAPLTIATAAGANGVSASRVRAA 188

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           +S   T ++  R+++LP   P  +TG   A G  W+  + +E+ +       T GLG  +
Sbjct: 189 ASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMV 242

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             ++       VV G+L++    LAL    R L   L  +   
Sbjct: 243 YSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPWRAE 285



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 93/224 (41%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           R +V +     D  +L Q+   +  RM +A  +++        L A +R +  V+ PI++
Sbjct: 73  RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + IP L +L   VV+F           + + I  I+ +    +T +       +    
Sbjct: 133 FYRPIPPLAYLPLMVVWFGIG--------DASKILLIYLTMFAPLTIATAAGANGVSASR 184

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              + S   + ++   ++ +P ++P ++  + +++  GW  +VA+E+I          G+
Sbjct: 185 VRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           G  +  A +      ++  +L +  +    +   + L R +  W
Sbjct: 239 GFMVYSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|86147801|ref|ZP_01066108.1| glycine betaine/L-proline transport system permease [Vibrio sp.
           MED222]
 gi|85834439|gb|EAQ52590.1| glycine betaine/L-proline transport system permease [Vibrio sp.
           MED222]
          Length = 364

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           L++      +I + L   Q + +   +   V +T   +      A  T   +++++   L
Sbjct: 98  LVSTPAPFMLIILFLVAWQFSNLKLGLATAVSLTFIGLIGAWSEAMTTLSLVMTSVFFCL 157

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P +L E   SF  S  Q  + + +P ++P ++  +  ++
Sbjct: 215 A-----LPPVVRLTILGIQQVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 14/281 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR   P +F+       +      F   ++
Sbjct: 53  PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110

Query: 353 CGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             VA   +   +G       T+  ++        T+  V+  +    +I +P+GIW+   
Sbjct: 111 FLVAWQFSNLKLGLATAVSLTFIGLIGAWSEAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              +  ++P    +   PA V+   +V          N+   ++ I      ++   I G
Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P +  E   SF  +  +    I LP   P  + G       + +  +++ + + G 
Sbjct: 227 IQQVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +     +       +G L +    + L+R 
Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320


>gi|224367278|ref|YP_002601441.1| ABC-type transporter, permease protein (membrane spanning protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223689994|gb|ACN13277.1| ABC-type transporter, permease protein (membrane spanning protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 258

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 85/201 (42%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   +     ++  RV+    +  +I +P+   I   P     ++   + L + P   
Sbjct: 49  LAETGELAKHLIVSFKRVLAGFSVTLVIAVPLSFLIYILPVFKRLLRVPLEFLRSVPPIS 108

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL++        +       +++  + + +  N++ G +    +++E++ +       
Sbjct: 109 TIPLLILWFGIGEASKMA----VIVMASFFPVFLNLMGGLNTIEKEWQELSETLKFNHAE 164

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           + RY++ PG FP ++TG        W A + +E+ +        +GLG  I +S E G  
Sbjct: 165 YIRYVLFPGAFPSFLTGIQLGLSYCWRALMGAEMIA------AASGLGYLILDSQEMGRI 218

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            +V +G++ +    + L+R L
Sbjct: 219 DKVFVGIITLGICGIVLDRVL 239



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 90/213 (42%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   +  R+L+   ++L+     + L         +L   L+ ++S+P +  +  
Sbjct: 53  GELAKHLIVSFKRVLAGFSVTLVIAVPLSFLIYILPVFKRLLRVPLEFLRSVPPISTIPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+    +A+ F +F         ++   L  I ++ +E+S + + +  +
Sbjct: 113 LILWFGIGEASKMAVIVMASFFPVF--------LNLMGGLNTIEKEWQELSETLKFNHAE 164

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+  P + P  +  + + +S  W  ++ +EMI          G+G  I  + +   +
Sbjct: 165 YIRYVLFPGAFPSFLTGIQLGLSYCWRALMGAEMIAAAS------GLGYLILDSQEMGRI 218

Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268
             +   ++T+     + D++   LF  +I W +
Sbjct: 219 DKVFVGIITLGICGIVLDRVLIKLFNRLIPWKD 251


>gi|186897091|ref|YP_001874203.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|186700117|gb|ACC90746.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
          Length = 264

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V           L Q+ + ++ R L    I      V   +   SR    +L 
Sbjct: 39  LLAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 99  SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LSG++    + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
             GIG     A +      ++ A++    +  L D   QLL R  + W   ++ +     
Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 264



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390
            R++  +      V   VA+   W S   ++                 +     I+ +R 
Sbjct: 10  HRLAPWILPVALVVGWQVAVEAGWLSNRILLAPSAVVTAFWALTKSGELWQHLTISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I   I + +G+  G        +    Q++   P     PLV+            
Sbjct: 70  LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+R    ++LPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239


>gi|266621608|ref|ZP_06114543.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288866706|gb|EFC99004.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 258

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 76/186 (40%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++      +++A +I +P+G  +G+   +S  ++P  +++   P   + PL +  V  
Sbjct: 66  LVSLKVACSGLLLAIVIGVPLGWLMGWYKTVSRFVRPIFEIMRPIPPIAWIPLTILWVGI 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    ++++ F +    + N  AG  +       VA ++  + +  +  I +P   
Sbjct: 126 G----LEAKAMIIFFASFVPCVINATAGIKSTNQTLINVAKTYGASDFTIFLKIGIPSSL 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   A   AW+  + +E+ +         GLG  I    + G    +VLG++ + 
Sbjct: 182 PMTFAGIRIALNSAWSTLVAAELLA------ANAGLGYMINMGRQFGRVDIIVLGMVTIG 235

Query: 564 CFVLAL 569
               A 
Sbjct: 236 ILGFAF 241



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 106/257 (41%), Gaps = 20/257 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           + R    ++  +L F+L+  G +   +   +    P  +   +   L+  S      +T 
Sbjct: 5   LDRYAVISVLSVLTFLLIWQGCVTAGILSDKILPAPTKVFAALFDKLNNKSPDGSLLQTN 64

Query: 70  LRM-----LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + +      S ++++++       L    + +   + PI +IM+ IP + ++  T+++  
Sbjct: 65  ILVSLKVACSGLLLAIVIGVPLGWLMGWYKTVSRFVRPIFEIMRPIPPIAWIPLTILWVG 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                K +         IF +       +    + +  + L  V++++  S +  F  +G
Sbjct: 125 IGLEAKAM--------IIFFASFVPCVINATAGIKSTNQTLINVAKTYGASDFTIFLKIG 176

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P     + ++++  W  +VA+E++          G+G  I +  +   +  I+  
Sbjct: 177 IPSSLPMTFAGIRIALNSAWSTLVAAELLAANA------GLGYMINMGRQFGRVDIIVLG 230

Query: 245 MLTMLGVIFLYDQLLFR 261
           M+T+  + F +  +  +
Sbjct: 231 MVTIGILGFAFSWIFTK 247


>gi|167041614|gb|ABZ06361.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_009A22]
          Length = 719

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/523 (17%), Positives = 168/523 (32%), Gaps = 54/523 (10%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +  I  I + V    + +  T   +L A  IS L        + +S+R+   L PIL++M
Sbjct: 183 LAGITMIYISVFGQWKPSMETLSFVLVAAPISFLLGLALGIWSYRSKRVEAALNPILNVM 242

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           Q++P   +L    V F     G   GA    IFA        M       L  +  ++ +
Sbjct: 243 QTMPHYAYLVPITVLFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQ 294

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
             +    + +Q  + + +P +   ++  +          ++    + V  + I   G+G 
Sbjct: 295 AGKMSGCNEFQLLFRVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGW 347

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLY 287
            + LA+ +  +   L A + +  +  L D+L     + W++K         +        
Sbjct: 348 NLLLALNQLRIGLALEAGICISLIAVLLDKLS----LAWAHKQTDYFAHLNFFQRHKYGL 403

Query: 288 LFRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL--- 334
            F     +  I  S  +F+           P +  +         + + +   F QL   
Sbjct: 404 FFVGAVIVGLIFASVGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIF 463

Query: 335 ----------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LG 383
                             M  +  F +V G    I       +V  FT    L   W   
Sbjct: 464 NTWLIVDVLQPMRAAYLRMPVVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRA 523

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T +     +I + II +  G         +         L  FP+ V+   V+     
Sbjct: 524 LVTAYMATFGVIASGIIGVVTGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGI 583

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + + +        Y     + G  + P    + AS   +T  +    I  P  F
Sbjct: 584 TDTSVLIAVIIYATIPATRY----TVEGLRSVPPALHDAASMSGVTRLQRLLQIDFPLAF 639

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           P+ + G       A    I+               LG YI ++
Sbjct: 640 PHIMLGINQTVVFALFMVIIGAFIGTED-------LGQYILKA 675


>gi|297180193|gb|ADI16414.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured bacterium HF770_09N20]
          Length = 686

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 85/552 (15%), Positives = 185/552 (33%), Gaps = 72/552 (13%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +     I L V    + + +T   +L A  +S +        A K+R++ + L P L++M
Sbjct: 152 LAGFSTIYLAVFGQWEPSMQTLSFVLFAAPVSFILGLTLGIWAYKNRKVELTLNPFLNVM 211

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           Q +P   +L   +V+F     G   GA    IFA        M       L  +  +  E
Sbjct: 212 QIMPHFSYLVPVMVFFG---IGDHAGAIATIIFATP-----PMVRLTVLGLKRVSPETLE 263

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
                  S +Q  + + +P +   ++  +          ++    + V  + I   G+G 
Sbjct: 264 AGMMSGCSNFQLMYKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGF 316

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLY 287
            + L++    +   +   + ++ +  + D++     + W+NK + +    +        +
Sbjct: 317 NLLLSLNGLRIGEAIEQGICIVLIAVVLDRMS----LAWANK-KTDYFADLT------FF 365

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
              K + L  +   + +  + +     +       I  H     ++      V ++ D F
Sbjct: 366 KRHKYSLLFLVILVAGSVLAYVGTFFFREGFNYLYIVPHNKGITIKDTLQHGVDWIWDTF 425

Query: 348 WFCV---------------------VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382
           +F +                     +  VA       +GYI+       ++    L    
Sbjct: 426 FFTLKGFNVFLIQQILMPMKAAYLSMPVVATLALTMGVGYIIGGIRSAAIVGGFILFIAL 485

Query: 383 ------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                   ITM+ +   +I+++II + VG       + +  I         FP+ ++   
Sbjct: 486 TEWWDRALITMYLMSFAVIVSTIIGVTVGTLCAQNSYTAKFILLVCDTFQTFPSFIYLIP 545

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+        +  + + +        Y     + G  +   D  +  S   +   + W  
Sbjct: 546 VIMLFGVTDTSVCIAVIVYATVPATRY----TVEGLRSVSPDLHDAGSMSGVNRLQRWVK 601

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK----GSF 552
           I LP  FP+   G       A +  I+  +            LG +I ++       G+ 
Sbjct: 602 IELPMSFPHMALGVNQTVVFALSMVIIGAMIGTDD-------LGQFILKALSDKNGTGNG 654

Query: 553 PEVVLGVLIMCC 564
             + L V  +  
Sbjct: 655 LTLGLCVAFIGL 666


>gi|218709173|ref|YP_002416794.1| glycine betaine/L-proline transport system permease ProW [Vibrio
           splendidus LGP32]
 gi|218322192|emb|CAV18306.1| Glycine betaine/L-proline transport system permease protein proW
           [Vibrio splendidus LGP32]
          Length = 364

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           L++      +I + L   Q + +   +   + +T   +      A  T   +++++   L
Sbjct: 98  LVSTPAPFMLIILFLVAWQFSNLKLGLATAISLTFIGLIGAWSGAMTTLSLVMTSVFFCL 157

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S      + PILD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E   SF  S  Q  + + +P ++P ++  +  ++
Sbjct: 215 A-----LPPVVRLTILGIQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 14/281 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F   +        S L+  V+        IR   P +F+       +      F   ++
Sbjct: 53  PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASIIWIPVGIWIGFR 411
             VA   +   +G           L   W G +T    V+  +    +I +P+GIW+   
Sbjct: 111 FLVAWQFSNLKLGLATAISLTFIGLIGAWSGAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              +  ++P    +   PA V+   +V          N+   ++ I      ++   I G
Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P D  E   SF  +  +    I LP   P  + G       + +  +++ + + G 
Sbjct: 227 IQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +     +       +G L +    + L+R 
Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320


>gi|327439295|dbj|BAK15660.1| ABC-type proline/glycine betaine transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 287

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F+L+I ++     G +       I+ ++ I      L +    T   +L + +I+++  
Sbjct: 57  VFILIIAVLAFFATGKKFGLAIFSIIGLLFIL--NQGLWEQLMNTFTLVLFSSLIAIVIG 114

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L +KS+ +  +L PILD MQ++P   +L   V +F     G V G   + IFA+ 
Sbjct: 115 IPLGILMSKSKVVEEILKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFALP 171

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +         +  +P  L E + S+  +  QK   + +P S   ++  +  ++   
Sbjct: 172 PTVRF-----TNLGIRQVPTHLIEAADSYGSTFTQKLVKVELPLSKSTIMAGINQTVLLS 226

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +     A ++++    + D+L
Sbjct: 227 LSMVVIASMI-------GAPGLGREVLSALQRAQIGNGFVAGISLVIFAIIVDRL 274



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 73/233 (31%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   + I    V+   A G  +    + +    +     +      T   V+   +IA +
Sbjct: 53  IPPYVFILIIAVLAFFATGKKFGLAIFSIIGLLFILNQGLWEQLMNTFTLVLFSSLIAIV 112

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI +     +   ++P    +   P  V+    V+      +       +     
Sbjct: 113 IGIPLGILMSKSKVVEEILKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF---- 168

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P    E A S+  T  +    + LP      + G       + +
Sbjct: 169 ALPPTVRFTNLGIRQVPTHLIEAADSYGSTFTQKLVKVELPLSKSTIMAGINQTVLLSLS 228

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +  + ++       +  + +  F + ++R 
Sbjct: 229 MVVIASMIG-------APGLGREVLSALQRAQIGNGFVAGISLVIFAIIVDRL 274


>gi|328956608|ref|YP_004373994.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4]
 gi|328672932|gb|AEB28978.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4]
          Length = 245

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 21/220 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVVVLIIIASI 399
            +  + + + W+ + Y+V H    + +  I+L              ++FR++  I+I+ +
Sbjct: 8   FIGLIGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISIL 67

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIWIG     +  + P   L+   P   F P+ +        +       L+++ 
Sbjct: 68  IGVPLGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLLFGLGDASK----ISLVVWI 123

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + ++ +V  G       + +V    H + W+ + Y++ P I P  ++G     G A  
Sbjct: 124 IVFQLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISGLRVCIGIAVA 183

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           +   +E       +    GLG YI  +     +P++  G+
Sbjct: 184 SLFFAE------NYATQYGLGYYIMNAWSVIDYPQMFCGI 217



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 90/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  +   L + +    +P  I  I         L  +   +  R+LSA++IS+L
Sbjct: 8   FIGLIGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISIL 67

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+    +L P+L ++  IP + FL   ++ F      K+       +F 
Sbjct: 68  IGVPLGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLLFGLGDASKISLVVWIIVF- 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+   +  I     +V R    S WQ F YL  P  +P ++  + + + 
Sbjct: 127 -------QLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISGLRVCIG 179

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258
                 +A   +   +      G+G YI  A    D   +   +     +  ++F    L
Sbjct: 180 ------IAVASLFFAENYATQYGLGYYIMNAWSVIDYPQMFCGILALCLLGFLLFKLIDL 233

Query: 259 LFRPMIVW 266
           L R +  W
Sbjct: 234 LERFLTPW 241


>gi|167838946|ref|ZP_02465723.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia thailandensis MSMB43]
          Length = 291

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 10/182 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ RV   + +A  + +P+G+ IG    + + + P  QLL       + P+ V      
Sbjct: 101 VSVMRVATGLGVALALGVPLGLLIGRVKWLDALLSPTFQLLRMISPLSWMPVAVMSFGIG 160

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +  L+ F   W IL +  +G +     + E+  S   T      +++LP I  
Sbjct: 161 ERS----ICFLLAFAALWPILMSTASGVAQIDRRWLELGESLAATRDELAWHVVLPAITA 216

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   + +E+         + GLG  + ++ ++ ++PE+   ++++  
Sbjct: 217 SVLGGMRLAIGVLWIVLVPAEMLG------VSAGLGYLVLDTRDRLAYPELAAVIVVIGV 270

Query: 565 FV 566
             
Sbjct: 271 IG 272



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 14/224 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P   +D VP  L    L  +   + +R+ + + ++L        L  + + L  +L P 
Sbjct: 78  APERALDSVPALLRDERLGMHVRVSVMRVATGLGVALALGVPLGLLIGRVKWLDALLSPT 137

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
             +++ I  L ++   V+ F           E +  F +  + +W +  S    +  I R
Sbjct: 138 FQLLRMISPLSWMPVAVMSFGIG--------ERSICFLLAFAALWPILMSTASGVAQIDR 189

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              E+  S   +  +  W++ +P     ++  M +++   W  +V +EM+ V        
Sbjct: 190 RWLELGESLAATRDELAWHVVLPAITASVLGGMRLAIGVLWIVLVPAEMLGVSA------ 243

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           G+G  +           +   ++ +  +    D L    +  W+
Sbjct: 244 GLGYLVLDTRDRLAYPELAAVIVVIGVIGLALDALARAALARWT 287


>gi|297198469|ref|ZP_06915866.1| glycine betaine ABC transport system permease [Streptomyces sviceus
           ATCC 29083]
 gi|197717386|gb|EDY61420.1| glycine betaine ABC transport system permease [Streptomyces sviceus
           ATCC 29083]
          Length = 871

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ ++   ++ T             +D   L + A  T   +L A +I+L+    
Sbjct: 49  LLLAGILAVIAFWLRGTLAGLLTFAGFAF-IDSLELWEDAMTTLSLVLVATIIALVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+  ++ P+LD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSSRVSGIVRPVLDFMQTLPAMIYLIPAILFFG---TGASAGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRDTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  AI + ++     A + ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 12/220 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +     ++  +       +S     L +T+    +   +  LQ      ++ +L +  F 
Sbjct: 3   RIPLGDWVNDTVDWLLDHVSWLFDFL-KTVFTGTYDGIDAVLQAPQPLLLAGILAVIAFW 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +   +A  + +    +I +   ++D          T+  V+V  IIA +I +PVGIW   
Sbjct: 62  LRGTLAGLLTFAGFAFIDSLELWED-------AMTTLSLVLVATIIALVIAVPVGIWAAR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S  ++P    +   PA ++    +           +   +  +       +     
Sbjct: 115 SSRVSGIVRPVLDFMQTLPAMIYLIPAILFFGTGASAGIVATLIFALA----PGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           G      +  E A +F  T       + LP   P  + G 
Sbjct: 171 GIRQVDKELVEAAEAFGTTPRDTLLRVQLPLALPTVMAGV 210


>gi|312114804|ref|YP_004012400.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311219933|gb|ADP71301.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 294

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 80/237 (33%), Gaps = 22/237 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWL----------GCITMFRVVVLII 395
           W   +  +AI  A    G+I         DV    W             I+  R +  ++
Sbjct: 48  WALPILLIAIWEAGCRAGFIPARVLPAPSDVAIAFWATAKTGALFHHAAISTERALGGLL 107

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +   I   +G+  G      + +    Q++   P     PLV+                L
Sbjct: 108 VGGSIGFFLGVLNGLSKSAETLLDSLLQMIRNVPHLAIIPLVILWFGIG----EEAKLFL 163

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + I  N   G         E+A  + ++ +  +R +ILPG  P  + G   A G
Sbjct: 164 VAIGVFFPIYLNTFHGIRTVDKGLIEMARVYGLSQFALFRRVILPGALPSVLVGLRYALG 223

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             W   IV+E  +       + G+G     + E      V+LG++I        +  
Sbjct: 224 IMWLTLIVAETIA------SSEGIGYMTMNAREFLQTDVVLLGIIIYAVLGKLADSL 274



 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 96/236 (40%), Gaps = 17/236 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +    P D+      T    +L  +A+ +T R L  +++     F    L   S+    
Sbjct: 69  ARVLPAPSDVAIAFWATAKTGALFHHAAISTERALGGLLVGGSIGFFLGVLNGLSKSAET 128

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L  +L +++++P L  +   +++F           E A +F +     + +  + +  +
Sbjct: 129 LLDSLLQMIRNVPHLAIIPLVILWFGIG--------EEAKLFLVAIGVFFPIYLNTFHGI 180

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             + + L E++R + LS +  F  + +P ++P ++  +  ++   W  ++ +E I   + 
Sbjct: 181 RTVDKGLIEMARVYGLSQFALFRRVILPGALPSVLVGLRYALGIMWLTLIVAETIASSE- 239

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
                GIG     A +      +L  ++    +  L D L   L +  + W   ++
Sbjct: 240 -----GIGYMTMNAREFLQTDVVLLGIIIYAVLGKLADSLTRALEQRALAWHPSYQ 290


>gi|296161625|ref|ZP_06844429.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295888102|gb|EFG67916.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 269

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 17/258 (6%)

Query: 327 FPENFLQLCSNQRVSY-MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
           FP  F +L    +V+   L +    ++          +        T+  +L +I  G  
Sbjct: 11  FPARFGRLTRFAKVAGQRLSLLAIFLIVWWLAAQRVPAFILPGPGKTWNALLDLIATGTF 70

Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                IT++RVV   ++A+++  P+GI +G    + S  +P   ++    A ++    + 
Sbjct: 71  AEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFALI 130

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                +         ++       IL NV  GA +   ++ E+A SF ++  +    I L
Sbjct: 131 WFGISNGT----TIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKVMTKIYL 186

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + PY+ +GA  A G  W  S+V+E          + G+G  + ++ +     +V    
Sbjct: 187 PTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLVQTDQVFAWT 240

Query: 560 LIMCCFVLALNRFLWHPL 577
           L M   ++ L   +  PL
Sbjct: 241 LTMVVLMVVLEYGILKPL 258



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 102/264 (38%), Gaps = 19/264 (7%)

Query: 5   NILPPFISR-----RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           ++ P    R     ++      LLA  L++  +            P    + +   +   
Sbjct: 9   SVFPARFGRLTRFAKVAGQRLSLLAIFLIVWWLAAQRVPAFILPGPGKTWNALLDLIATG 68

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +  +    T  R+++  +++ L       L   +RRLG    P+L ++ ++    +  F 
Sbjct: 69  TFAEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFA 128

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F               IF +F   +  +  +++Q   ++  +  E++RSF++S  + 
Sbjct: 129 LIWFGISNG--------TTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKV 180

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P  +P       ++   GW   + +E I   +      G+G  +  A       
Sbjct: 181 MTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIGSSN------GVGYRLRQAADLVQTD 234

Query: 240 AILYAMLTMLGVIFLYDQLLFRPM 263
            +    LTM+ ++ + +  + +P+
Sbjct: 235 QVFAWTLTMVVLMVVLEYGILKPL 258


>gi|163845505|ref|YP_001623160.1| hypothetical protein BSUIS_B1419 [Brucella suis ATCC 23445]
 gi|163676228|gb|ABY40338.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 250

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P  Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSLIEPRVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L      
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242

Query: 577 LYLYGTR 583
           L  +  R
Sbjct: 243 LTQWQER 249



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 17/245 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L    R    ++ P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGWYRIARSLIEPRVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL    R + 
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244

Query: 265 VWSNK 269
            W  +
Sbjct: 245 QWQER 249


>gi|55233214|gb|AAV48566.1| OpuAB [Halobacillus trueperi]
          Length = 281

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F++V+G++     G +   +   ++ +  I      L +    T   ++ A +IS++
Sbjct: 52  IWLFIIVVGVLAFFASGKKLGLMAFSVIGLWFIA--NQELWEELMNTFTLVIFASLISVI 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +    AKS+    +L P+LD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 110 IGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFFS---IGMVPGVFASVIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +  +         +  +  +L E S +F  +G QK + + +P +   ++  +  ++ 
Sbjct: 167 TPPTVRF-----TNLGIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIMAGINQTVM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G  +   ++  ++     A L ++ +  + D+ 
Sbjct: 222 LALSMVVIASMI-------GAKGLGQTVITGLQRAEVGTGFVAGLGIVILAIIIDRF 271



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   L I    V+   A G     + + V    +     +      T   V+   +I+ I
Sbjct: 50  IPIWLFIIVVGVLAFFASGKKLGLMAFSVIGLWFIANQELWEELMNTFTLVIFASLISVI 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P GIW+         + P    +   PA V+    V+  S   +       +     
Sbjct: 110 IGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFFSIGMVPGVFASVIFATPP 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T  +       G     ++  E + +F  TG +    + LP      + G       A +
Sbjct: 170 TVRF----TNLGIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIMAGINQTVMLALS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +    ++       +  L +    + ++RF
Sbjct: 226 MVVIASMIG-------AKGLGQTVITGLQRAEVGTGFVAGLGIVILAIIIDRF 271


>gi|225619375|ref|YP_002720601.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Brachyspira hyodysenteriae WA1]
 gi|225214194|gb|ACN82928.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Brachyspira hyodysenteriae WA1]
          Length = 266

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 95/245 (38%), Gaps = 18/245 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74
           +  ++ F++V  ++         T  P ++   +  +L       ++  +   +  R+L+
Sbjct: 21  VISIIGFLIVWQLLTTYTPIKITTPKPLEVFKFLVWSLTHNIGQQTILGHILISIFRVLT 80

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I  +   +       ++    ++ P  ++ + IP + ++   +++F           
Sbjct: 81  GFAIGAVTGIILGISMGVNKYARAIIRPFFEVFRQIPPIAWIPMAILWFGIG-------- 132

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E+  +F IF     N+T + Y     +   L   ++    +    F ++ +P S+P +  
Sbjct: 133 EVPKVFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNERDIFLHVILPASVPQIFN 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M +  S  W  V+A+EM+          G+G  I       ++  +L  M+ +  V  L
Sbjct: 193 GMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAGMIAIGIVGLL 246

Query: 255 YDQLL 259
              L+
Sbjct: 247 LSSLM 251



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++FRV+    I ++  I +GI +G   +  + I+PF ++    P   + P+ +
Sbjct: 67  ILGHILISIFRVLTGFAIGAVTGIILGISMGVNKYARAIIRPFFEVFRQIPPIAWIPMAI 126

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +    ++  GT   +  N  AG+S         A          + ++I
Sbjct: 127 LWFGIG----EVPKVFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNERDIFLHVI 182

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G       +W   + +E+ S         G+G  I   ++  + P+V+ G
Sbjct: 183 LPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAG 236

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+  +
Sbjct: 237 MIAIGIVGLLLSSLM 251


>gi|62318003|ref|YP_223856.1| taurine ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|83269979|ref|YP_419270.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|161621231|ref|YP_001595117.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|189023256|ref|YP_001932997.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237817550|ref|ZP_04596540.1| taurine ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254695140|ref|ZP_05156968.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 3 str. Tulya]
 gi|254698241|ref|ZP_05160069.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699309|ref|ZP_05161137.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|254706447|ref|ZP_05168275.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254711265|ref|ZP_05173076.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254711866|ref|ZP_05173677.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254714935|ref|ZP_05176746.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|254731684|ref|ZP_05190262.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|256015947|ref|YP_003105956.1| taurine ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256030106|ref|ZP_05443720.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256059757|ref|ZP_05449952.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella neotomae 5K33]
 gi|256158277|ref|ZP_05456186.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|256252782|ref|ZP_05458318.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
 gi|260166843|ref|ZP_05753654.1| taurine ABC transporter, permease protein [Brucella sp. F5/99]
 gi|260544189|ref|ZP_05820010.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260568666|ref|ZP_05839135.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260759441|ref|ZP_05871789.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260762685|ref|ZP_05875017.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|261215494|ref|ZP_05929775.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|261216626|ref|ZP_05930907.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261219861|ref|ZP_05934142.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261313900|ref|ZP_05953097.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261318859|ref|ZP_05958056.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319495|ref|ZP_05958692.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261323736|ref|ZP_05962933.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261749752|ref|ZP_05993461.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261756221|ref|ZP_05999930.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265987135|ref|ZP_06099692.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996797|ref|ZP_06109354.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294853015|ref|ZP_06793687.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306841185|ref|ZP_07473901.1| taurine ABC transporter, permease protein [Brucella sp. BO2]
 gi|306845344|ref|ZP_07477919.1| taurine ABC transporter, permease protein [Brucella sp. BO1]
 gi|75505039|sp|Q576D9|Y3424_BRUAB RecName: Full=Probable ABC transporter permease protein BruAb2_1124
 gi|123545573|sp|Q2YJB4|Y3648_BRUA2 RecName: Full=Probable ABC transporter permease protein BAB2_1148
 gi|62198196|gb|AAX76495.1| taurine ABC transporter, permease protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82940253|emb|CAJ13314.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|161338042|gb|ABX64346.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|189021830|gb|ACD74551.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237787305|gb|EEP61523.1| taurine ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|255998607|gb|ACU50294.1| taurine ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260097460|gb|EEW81334.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260155331|gb|EEW90412.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260669759|gb|EEX56699.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260673106|gb|EEX59927.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260917101|gb|EEX83962.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260918445|gb|EEX85098.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260921715|gb|EEX88283.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292185|gb|EEX95681.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298082|gb|EEY01579.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261299716|gb|EEY03213.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261302926|gb|EEY06423.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261736205|gb|EEY24201.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261739505|gb|EEY27431.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|262551094|gb|EEZ07255.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659332|gb|EEZ29593.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294818670|gb|EFG35670.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306274260|gb|EFM56072.1| taurine ABC transporter, permease protein [Brucella sp. BO1]
 gi|306288811|gb|EFM60129.1| taurine ABC transporter, permease protein [Brucella sp. BO2]
          Length = 250

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L      
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242

Query: 577 LYLYGTR 583
           L  +  R
Sbjct: 243 LTQWQER 249



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 17/245 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L    R    ++ P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL    R + 
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244

Query: 265 VWSNK 269
            W  +
Sbjct: 245 QWQER 249


>gi|229122458|ref|ZP_04251671.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 95/8201]
 gi|228661019|gb|EEL16646.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 95/8201]
          Length = 282

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPAKLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 85/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P  +P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAKLPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280


>gi|149201337|ref|ZP_01878312.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149145670|gb|EDM33696.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 421

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+V   + +++ IP+G  +G          P  + +   P     PLV+       
Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +  +  AG S         A S   + W+  R++I+P   P 
Sbjct: 290 SGK----IILLFLAALWIMTISARAGVSGVAISKVHAAYSLGASKWQLMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           ++++        +L ++   +  R++    +  L           S        PI++ M
Sbjct: 210 LIEVSKQGYQNFTLWEHLYWSLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFM 269

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P L  +   +++      GK        I  +F + +W MT S    +  +      
Sbjct: 270 RPVPPLALIPLVIIWAGIGESGK--------IILLFLAALWIMTISARAGVSGVAISKVH 321

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            + S   S WQ   ++ VP S+P +     ++M   W  VVA+E++          G G 
Sbjct: 322 AAYSLGASKWQLMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 375

Query: 228 YIALAIKEQDLLAILY 243
            I +A + Q    +L 
Sbjct: 376 MIMVASRFQLTDIVLM 391


>gi|22127835|ref|NP_671258.1| taurine transporter subunit [Yersinia pestis KIM 10]
 gi|45440044|ref|NP_991583.1| taurine transporter subunit [Yersinia pestis biovar Microtus str.
           91001]
 gi|51598010|ref|YP_072201.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 32953]
 gi|108809279|ref|YP_653195.1| taurine transporter subunit [Yersinia pestis Antiqua]
 gi|108814043|ref|YP_649810.1| taurine transporter subunit [Yersinia pestis Nepal516]
 gi|145597430|ref|YP_001161505.1| taurine transporter subunit [Yersinia pestis Pestoides F]
 gi|150260765|ref|ZP_01917493.1| putative taurine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153947400|ref|YP_001402884.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 31758]
 gi|162419908|ref|YP_001608012.1| taurine transporter subunit [Yersinia pestis Angola]
 gi|165927845|ref|ZP_02223677.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939995|ref|ZP_02228531.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010451|ref|ZP_02231349.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213174|ref|ZP_02239209.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398652|ref|ZP_02304176.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418878|ref|ZP_02310631.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425704|ref|ZP_02317457.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468834|ref|ZP_02333538.1| taurine ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170022521|ref|YP_001719026.1| taurine transporter subunit [Yersinia pseudotuberculosis YPIII]
 gi|186897206|ref|YP_001874318.1| taurine transporter subunit [Yersinia pseudotuberculosis PB1/+]
 gi|218927393|ref|YP_002345268.1| taurine transporter subunit [Yersinia pestis CO92]
 gi|229836334|ref|ZP_04456501.1| putative taurine transport system permease protein [Yersinia pestis
           Pestoides A]
 gi|229840042|ref|ZP_04460201.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842124|ref|ZP_04462279.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904576|ref|ZP_04519687.1| putative taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|270488210|ref|ZP_06205284.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294502269|ref|YP_003566331.1| putative taurine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21960968|gb|AAM87509.1|AE014000_13 taurine ABC transport system inner membrane permease protein
           [Yersinia pestis KIM 10]
 gi|45434899|gb|AAS60460.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51591292|emb|CAH22958.1| ABC taurine transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777691|gb|ABG20210.1| taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|108781192|gb|ABG15250.1| putative taurine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115346004|emb|CAL18869.1| putative taurine transport system permease protein [Yersinia pestis
           CO92]
 gi|145209126|gb|ABP38533.1| taurine transport system permease protein [Yersinia pestis
           Pestoides F]
 gi|149290173|gb|EDM40250.1| putative taurine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152958895|gb|ABS46356.1| taurine ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352723|gb|ABX86671.1| taurine ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165912035|gb|EDR30676.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920121|gb|EDR37422.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990541|gb|EDR42842.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205472|gb|EDR49952.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962872|gb|EDR58893.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051156|gb|EDR62564.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055394|gb|EDR65188.1| taurine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749055|gb|ACA66573.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186700232|gb|ACC90861.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229678694|gb|EEO74799.1| putative taurine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|229690434|gb|EEO82488.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696408|gb|EEO86455.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229706402|gb|EEO92409.1| putative taurine transport system permease protein [Yersinia pestis
           Pestoides A]
 gi|262360349|gb|ACY57070.1| putative taurine transport system permease protein [Yersinia pestis
           D106004]
 gi|270336714|gb|EFA47491.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294352728|gb|ADE63069.1| putative taurine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320013319|gb|ADV96890.1| putative taurine transport system permease protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 284

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 101/281 (35%), Gaps = 29/281 (10%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           + + +     P+   +     +  ++       VV       A Q IG +      Q VL
Sbjct: 10  QAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLFLPA-PQQVL 68

Query: 378 YVIWLGC---------------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           + +W                   ++ R+ V ++ A ++ +P GI +G   ++   + P  
Sbjct: 69  HQLWTIASPQGFMDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLI 128

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           ++    P   + PL+V        +      LL+       +    +AG  +  +     
Sbjct: 129 EIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLAAVAGVRSVAHVRVRA 184

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +   + W+   +++LP   P  +TG     G  W+  + +E+ +       T GLG  
Sbjct: 185 ARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFM 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +  + E  +   V+ G+ ++      +    R +   L  +
Sbjct: 239 VQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 279



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 102/251 (40%), Gaps = 22/251 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMVI 78
              L   +  + L G      P+ ++  +     P      +L Q+ + +  R+  A++ 
Sbjct: 43  VVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGFMDATLWQHLAASLGRIFVALLA 102

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++           +  +  VL P+++I + +P L +L   V++F           E + 
Sbjct: 103 AVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSK 154

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I+ +    +T +    + ++       +R+   S WQ  W++ +P ++P ++  + +
Sbjct: 155 ILLIYLAIFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRI 214

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LY 255
            +  GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   L 
Sbjct: 215 GLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELS 268

Query: 256 DQLLFRPMIVW 266
            + + R +  W
Sbjct: 269 LRAIQRRLTPW 279


>gi|160898108|ref|YP_001563690.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160363692|gb|ABX35305.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 399

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+I ++ ++        +      +  + + +  +   A  T   +L+++V  ++    
Sbjct: 143 PLLILVLTLVAWQFAGRAMAIGAA-VSLVVVAMLGIWPEAMVTLSLVLTSLVFCMVIGLP 201

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A S R      P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 202 AGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFA---- 254

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  DL E SR++  S WQ  W + +P +MP ++  +  ++     
Sbjct: 255 -LPPLIRLTNLGIRQVRPDLIEASRAYGASPWQLLWKVQLPLAMPSIMAGVNQALMLSLS 313

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       L ++ +  + D++
Sbjct: 314 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 359



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 80/231 (34%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             + ++  V   +AWQ  G  +            +L +     +T+  V+  ++   +I 
Sbjct: 140 LPWPLLILVLTLVAWQFAGRAMAIGAAVSLVVVAMLGIWPEAMVTLSLVLTSLVFCMVIG 199

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P GI +          +P    +   PA V+   VV          N+   ++ I    
Sbjct: 200 LPAGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIIFAL 255

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++     G      D  E + ++  + W+    + LP   P  + G   A   + +  
Sbjct: 256 PPLIRLTNLGIRQVRPDLIEASRAYGASPWQLLWKVQLPLAMPSIMAGVNQALMLSLSMV 315

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 316 VIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 359


>gi|148254724|ref|YP_001239309.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146406897|gb|ABQ35403.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 286

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 90/265 (33%), Gaps = 15/265 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLY 378
           G  R H          +     +L + W  +  G  +   +       +   +       
Sbjct: 24  GADRRHAIGPATLQALSWLAPALLVVIWEALAQGGYLSPQVLPAPSKILRTAYKLTTQGT 83

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +++ R      I   I   +G+ +GF     + I    Q++ A P     PLV+
Sbjct: 84  LLNDLGVSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALIDRSIQMIRAIPFLAVLPLVI 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  + I  N   G         E+A    ++     R II
Sbjct: 144 VWLGVGEAEK----VFLVALGVTFPIYINTTLGIRQVDPKLIELARVQGLSPLALIRRII 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  +TG   A   AW A +V+E           +GLG    ++ E      +VL 
Sbjct: 200 LPGALPSILTGVRYALATAWLALVVAETIG------AQSGLGFLAMDAREFLRTDVIVLT 253

Query: 559 VLIMCCFVLALN---RFLWHPLYLY 580
           ++I     +  +   R+L   L  +
Sbjct: 254 IVIYALIGVLADLIARWLERRLLAW 278



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I+          +L      + LR  +   I     FV   L   SR    ++ 
Sbjct: 65  LPAPSKILRTAYKLTTQGTLLNDLGVSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALID 124

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  L   +V+            E   +F +     + +  +    +  +
Sbjct: 125 RSIQMIRAIPFLAVLPLVIVWLGVG--------EAEKVFLVALGVTFPIYINTTLGIRQV 176

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R   LS       + +P ++P ++  +  +++  W  +V +E I        
Sbjct: 177 DPKLIELARVQGLSPLALIRRIILPGALPSILTGVRYALATAWLALVVAETIG------A 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             G+G     A +      I+  ++    +  L D +   L R ++ W   +
Sbjct: 231 QSGLGFLAMDAREFLRTDVIVLTIVIYALIGVLADLIARWLERRLLAWHPNY 282


>gi|319942970|ref|ZP_08017253.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
 gi|319743512|gb|EFV95916.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
          Length = 647

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +++A +  L+  F    L A+SR L   L P+LDI+Q++P   +L   
Sbjct: 454 GLWTPLLQTLALLVAAFLFILVIGFPLGILMARSRWLHRWLSPVLDIIQTMPSFVYLIPV 513

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F            + A+FA        +       +  +   + E + SF  +  Q 
Sbjct: 514 LMLFGIG--------RIPALFATVVYATAPLVRLTALGIREVDARMVESAESFGCTRTQL 565

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +++ +P + P ++  +  ++      VV + MI          G+G  +  AI+  D+ 
Sbjct: 566 LFWVLLPQARPAILAGINQAVMMSLGMVVVASMI-------GARGLGENVLQAIQTLDIG 618

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A   ++ +  + D++
Sbjct: 619 RGVQAGAAIVILAIVIDRI 637



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 97/279 (34%), Gaps = 18/279 (6%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           + +W+    L++++ +L    G   F      L       +   L      ++  +  G+
Sbjct: 371 FPAWSVADWLNDSLARLVSNHGET-FRAFSQSLLHGLLLPLERALAAVPPWLLLALLAGL 429

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           AW + G + +        Y+I    +      T+  +V   +   +I  P+GI +     
Sbjct: 430 AWHATGSLGSAAFSAAGFYLIGGLGLWTPLLQTLALLVAAFLFILVIGFPLGILMARSRW 489

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+       + P L+ +++        ++     G  
Sbjct: 490 LHRWLSPVLDIIQTMPSFVYLIPVLMLFGIGRI-PALFATVVYATA---PLVRLTALGIR 545

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A SF  T  +   +++LP   P  + G   A   +    +V+ +       
Sbjct: 546 EVDARMVESAESFGCTRTQLLFWVLLPQARPAILAGINQAVMMSLGMVVVASMIG----- 600

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  + ++ +       V     +    + ++R 
Sbjct: 601 --ARGLGENVLQAIQTLDIGRGVQAGAAIVILAIVIDRI 637


>gi|126730357|ref|ZP_01746168.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126709090|gb|EBA08145.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 421

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 4/145 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRV++     +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 228 GYSLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 287

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +L+     W +     AG S         A S   + W+  R++I+P   
Sbjct: 288 GELGK----IILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQIMRHVIVPNSL 343

Query: 504 PYYVTGAITACGGAWNASIVSEVAS 528
           P   TGA  A G  W   + +E+ +
Sbjct: 344 PEIFTGARVAMGVCWGTVVAAELVA 368



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 8/157 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R++       L           S        PI++ M+ +P L  +  
Sbjct: 221 STLWEHLGYSLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            EL  I  +F + +W M  +    +  +       + S   S WQ
Sbjct: 281 VIIWAGIG--------ELGKIILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQ 332

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
              ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 333 IMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|150376356|ref|YP_001312952.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150030903|gb|ABR63019.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 281

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 90/265 (33%), Gaps = 25/265 (9%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383
           +L+        ++        V  +    +           +   +L  +W G       
Sbjct: 24  YLRRSGTAAGGWLSRYGLLIAVLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83

Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +++ R       A ++ IP+G+ +G    I + + P  QL     A   +P+ +  
Sbjct: 84  DDIAVSLQRSGTAFAGAVVLAIPLGLLMGQVRSIENALDPVLQLFRQTSALALYPVFILL 143

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +     +       ++ + T + +L + I+G     +   E+A  +  +    +R ++LP
Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P    G   +   A    I SE+           G+G  +  +      P +   + 
Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585
           I+    L  N  L     ++  R L
Sbjct: 254 ILAGLGLLSNYAL-----VFAQRRL 273



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73
           + + + LL  VL +         I     P    I+  +   +   +L    + +  R  
Sbjct: 35  WLSRYGLLIAVLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAVSLQRSG 94

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++       L  + R +   L P+L + +    L      ++            
Sbjct: 95  TAFAGAVVLAIPLGLLMGQVRSIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + +F IF + ++ +  S    +  +   L E++R +  S    F  + +P ++P + 
Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +     ++ASEMI          GIG  +  A     +  +  A+  + G+  
Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260

Query: 254 LYDQLLF---RPMIVWSN 268
           L +  L    R +  WS+
Sbjct: 261 LSNYALVFAQRRLCRWSD 278


>gi|39937222|ref|NP_949498.1| putative taurine ABC transport system permease [Rhodopseudomonas
           palustris CGA009]
 gi|192293002|ref|YP_001993607.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Rhodopseudomonas palustris TIE-1]
 gi|39651080|emb|CAE29603.1| putative taurine ABC transport system permease protein
           [Rhodopseudomonas palustris CGA009]
 gi|192286751|gb|ACF03132.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 277

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V  ++A ++ + +G+  G+   +S  ++P  + L   P   + P+ +     
Sbjct: 82  GASLQRVAVGFLLACVVGLTLGLICGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGL 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + +             +    A       W+ +  +++P   
Sbjct: 142 GDA----ASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPASL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   + +E+ +        TGLG  I +S        VV G++ + 
Sbjct: 198 PIILPGLRIALGVGWMCVVTAELIA------AQTGLGYLIQQSRMLFQINNVVAGMVTIG 251

Query: 564 CFVLALNRFL 573
               A++  L
Sbjct: 252 LIGFAMSAIL 261



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 100/253 (39%), Gaps = 14/253 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F  R +   +     F +   I  + L        P  I + +       SL  +   +
Sbjct: 25  AFAGRPMRAAVGLTAFFAIWQAITQLNLVDGFLLPSPVAIAEALWELALDGSLWVHLGAS 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+    +++ +       +    R +   + P+++ ++ IP L ++  T+++F     
Sbjct: 85  LQRVAVGFLLACVVGLTLGLICGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGLG-- 142

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 + A+ F +F   V+ +  + Y ++  + R+    +       WQ F  + +P S
Sbjct: 143 ------DAASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPAS 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +++  GW  VV +E+I          G+G  I  +     +  ++  M+T+
Sbjct: 197 LPIILPGLRIALGVGWMCVVTAELIAAQT------GLGYLIQQSRMLFQINNVVAGMVTI 250

Query: 249 LGVIFLYDQLLFR 261
             + F    +L R
Sbjct: 251 GLIGFAMSAILER 263


>gi|126464361|ref|YP_001045474.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126106172|gb|ABN78702.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 276

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              V+    ++++R++  + +A ++   +G+ IG      +  +P    L   P   + P
Sbjct: 70  PYGVLLDIALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISALMPIPTLAWTP 129

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++          N     ++     + I++NV+ G          VA+S   +  +  R
Sbjct: 130 ILLLVFGI----DNRTTITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRLQTLR 185

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+I+PGI PY +TG     G AW A I +E+ +       + GLG  I ++ E      +
Sbjct: 186 YVIIPGILPYLITGLKLGVGYAWRALIAAEMLA-----ASSHGLGFMIYDAQEYMDMKSI 240

Query: 556 VLGVLIMCCFVLALNR 571
             G+L +    L + R
Sbjct: 241 YGGILTISVLGLLIER 256



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 84/210 (40%), Gaps = 13/210 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
            V   P     + +    + +  R+L+ + ++L+   +       +R    +  PI+  +
Sbjct: 60  WVSAGPNGDPPYGVLLDIALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAL 119

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
             IP L +    ++ F               I  +F +  + + +++   +  + R    
Sbjct: 120 MPIPTLAWTPILLLVFGIDNR--------TTITVVFIAASFEIIYNVVTGIEMMTRKTYW 171

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V+ S   S  Q   Y+ +P  +P L+  + + +   W  ++A+EM+          G+G 
Sbjct: 172 VAASMGASRLQTLRYVIIPGILPYLITGLKLGVGYAWRALIAAEMLAASSH-----GLGF 226

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            I  A +  D+ +I   +LT+  +  L ++
Sbjct: 227 MIYDAQEYMDMKSIYGGILTISVLGLLIER 256


>gi|291458647|ref|ZP_06598037.1| taurine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291419180|gb|EFE92899.1| taurine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 242

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 91/233 (39%), Gaps = 13/233 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +L + W+     +   +        +  F   + +   ++ LG IT+ RV+     A++I
Sbjct: 4   LLAVLWYFAAKWIDRPMILPDFSETMGEFLRDWTEPRVLLNLG-ITLCRVLTGTFYAALI 62

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
              +G+ +G+       I P    +   P   + PL +                L+    
Sbjct: 63  GTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGLGEG----PTVFLIFMSA 118

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + ++ N ++G S+   ++   A S        +R II+PG  P ++TG   A G  W +
Sbjct: 119 VFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPGAMPGFLTGLRLAVGAGWMS 178

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I +E  +         G G  + E+ ++    ++   +++     L +++ +
Sbjct: 179 VICAEFIA------TNKGFGYLLIEAQQRLQTSKLYSLMIMSALVGLFIDQLI 225



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 17/205 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+L+    + L   V       S     ++ PI++ ++ +PI+ ++  ++V+F    
Sbjct: 48  TLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGLG- 106

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   +F IF S V+ +  +    + +I R+    ++S        +  + VP 
Sbjct: 107 -------EGPTVFLIFMSAVFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPG 159

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MPG +  + +++  GW  V+ +E I          G G  +  A +      +   M+ 
Sbjct: 160 AMPGFLTGLRLAVGAGWMSVICAEFIATNK------GFGYLLIEAQQRLQTSKLYSLMIM 213

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269
              V    DQ   LL R +  W  +
Sbjct: 214 SALVGLFIDQLIRLLERKLTGWRFR 238


>gi|330861878|emb|CBX72048.1| taurine transport system permease protein tauC [Yersinia
           enterocolitica W22703]
          Length = 296

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           LR           P S  +              P       S   +  ++ ++W     G
Sbjct: 7   LRDASLHPKATSLPASEALPPALLNAKRPVRRLPAKKGLWLSIVTLVSVVVLWWAVTALG 66

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408
           +   +   +   +++                      ++ R+++ ++ A  + +P GI +
Sbjct: 67  LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   + P  ++    P   + PL+V        +      LL+       I    
Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +AG  +        A +   + W+   ++ILP   P  +TG     G  W+  + +E+ +
Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                  T GLG  +  + E  +   V+ G+ ++      +    R +   L  +
Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              ++  L   V  +G+I+ L     +  + + +V   P      +L Q+ + +  R+L 
Sbjct: 51  TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ ++            S  +  VL P+++I + +P L +L   V++F           
Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + I  I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++ 
Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253
            + + +  GW  +VA+E+I          G+G  +  A +      ++  +  +  + F 
Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276

Query: 254 --LYDQLLFRPMIVW 266
             L  + + R +  W
Sbjct: 277 MELSLRAIQRRLTPW 291


>gi|220913559|ref|YP_002488868.1| binding-protein-dependent transporters inner membrane component
           [Arthrobacter chlorophenolicus A6]
 gi|219860437|gb|ACL40779.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 320

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 10/221 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+V  + +      L +    +  R L   +IS+        L A+   L     P
Sbjct: 94  PGPLDVVGQMGVLWGEGKLQEAMWTSLQRGLVGFLISVAIATPVGLLLAQVAPLRRAFGP 153

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +Q +P + ++   +++F           +    F +F   + ++   +   +  IP
Sbjct: 154 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVVFMGAIPSIINGLISGVDQIP 205

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V      +  Q    + +P ++PG +  +    +  W  ++A+E+I VG T+   
Sbjct: 206 PQFRRVGTVLGANRLQMALQVVLPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGTIG-- 263

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+GS +       D+  ++ A+L +LGV  L + L+F P+
Sbjct: 264 FGLGSLLDQGRALSDMTVVMSAILLILGVGILIELLVFAPI 304



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 73/192 (38%), Gaps = 6/192 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +V  +I+  I  PVG+ +     +     P    L   P+  + P  +       
Sbjct: 119 SLQRGLVGFLISVAIATPVGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 178

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  ++  G    I+  +I+G    P  F+ V +       +    ++LP   P 
Sbjct: 179 AT----VYFVVFMGAIPSIINGLISGVDQIPPQFRRVGTVLGANRLQMALQVVLPAALPG 234

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ + G       GLG+ + +         V+  +L++   
Sbjct: 235 YLGGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSLLDQGRALSDMTVVMSAILLILGV 292

Query: 566 VLALNRFLWHPL 577
            + +   ++ P+
Sbjct: 293 GILIELLVFAPI 304


>gi|160886481|ref|ZP_02067484.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483]
 gi|156108366|gb|EDO10111.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483]
          Length = 274

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ +      +      I   + + L       +   +T   + S+  ++L
Sbjct: 41  LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IIGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V     +
Sbjct: 39  HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A II +P+G+W    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIIGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|186470976|ref|YP_001862294.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197285|gb|ACC75248.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 284

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 29/257 (11%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--------- 364
           + L R   +++         +   +R     + +W      V   + WQ++         
Sbjct: 2   RALPRLAKMMKHPVDSPIEPVIKIRRARGKWNSYWLTTAVLVICVVLWQAVSMAGIFPAF 61

Query: 365 GYIVNHFTYQDVLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
                   +Q  + ++  G           I+ FR+V+  + A  I +P+G+ +     +
Sbjct: 62  ALPSPVAVWQAFIEIVRNGYGGQSLISDILISCFRIVIGFVGAIAIGVPIGLLMSRNKIV 121

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              I P  Q +   P   + PL+V       L      ++L++ GT   I+   ++G  +
Sbjct: 122 FDIIDPLLQFVRPVPPLAYIPLLVVWFGIGEL----PKAILILVGTIPVIIIGTMSGVKS 177

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P     VA +   +  + +R ++LP   P   T      G AW   + +E+ +      
Sbjct: 178 TPPLRISVARTLGASNAQIFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIA------ 231

Query: 535 RTTGLGAYIAESTEKGS 551
            ++GLG  +  + +   
Sbjct: 232 ASSGLGWLVQFAGQALQ 248



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 69/174 (39%), Gaps = 14/174 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      +  R++   V ++        L ++++ +  ++ P+L  ++ +P L ++  
Sbjct: 84  QSLISDILISCFRIVIGFVGAIAIGVPIGLLMSRNKIVFDIIDPLLQFVRPVPPLAYIPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            VV+F           EL     I    +  +       + + P     V+R+   S  Q
Sbjct: 144 LVVWFGIG--------ELPKAILILVGTIPVIIIGTMSGVKSTPPLRISVARTLGASNAQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            F  + +P ++P +   M + +   W  +VA+E+I          G+G  +  A
Sbjct: 196 IFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIAASS------GLGWLVQFA 243


>gi|262369775|ref|ZP_06063103.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Acinetobacter johnsonii SH046]
 gi|262315843|gb|EEY96882.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Acinetobacter johnsonii SH046]
          Length = 273

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 107/249 (42%), Gaps = 17/249 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQYASRTTLRMLSAMVISLLF 82
            +L+I    ++  G  E  +      +    LD+    L  +   +T R+    +I    
Sbjct: 35  VLLLIACEYLVRAGFIEPYLLPAPSSLWQTFLDLWQADLWMHVWTSTWRVFLGFLIGSAL 94

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++A L   ++++   L P    ++SIP L ++   +++            E + I  I
Sbjct: 95  ALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLLLWLGID--------EASKITLI 146

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                +    +   ++  + R L EV+R +RL  WQ+   + +P + PG++  +  S+S 
Sbjct: 147 AIGAFFPTYTNTVAAIKGVDRKLIEVARVYRLKYWQQVQQIILPAASPGILTGLRNSLSL 206

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W F++A+E+I          GIG  ++   +      ++ A++ +  +  L D ++ + 
Sbjct: 207 AWMFMIAAELIA------ATQGIGYLLSDGRETSRPDIVILAIILLAVLGKLSDSIM-KA 259

Query: 263 MIVWSNKFR 271
           +  W  ++R
Sbjct: 260 IETWLLRWR 268



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ+   +     +  V    W       RV +  +I S + +   I +G    + + ++
Sbjct: 61  LWQTFLDLWQADLWMHVWTSTW-------RVFLGFLIGSALALMFAILVGLNKQVEAFLE 113

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P    + + P+  + PL++  +             L+  G  +    N +A         
Sbjct: 114 PSFSAIKSIPSLAWIPLLLLWLGI----DEASKITLIAIGAFFPTYTNTVAAIKGVDRKL 169

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            EVA  + +  W+  + IILP   P  +TG   +   AW   I +E+ +       T G+
Sbjct: 170 IEVARVYRLKYWQQVQQIILPAASPGILTGLRNSLSLAWMFMIAAELIA------ATQGI 223

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  +++  E      V+L ++++       +  +
Sbjct: 224 GYLLSDGRETSRPDIVILAIILLAVLGKLSDSIM 257


>gi|302550270|ref|ZP_07302612.1| glycine betaine ABC transport system permease [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467888|gb|EFL30981.1| glycine betaine ABC transport system permease [Streptomyces
           viridochromogenes DSM 40736]
          Length = 872

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 93/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  ++   ++ T             +D   L + A  T   +L A VI+L+ +  
Sbjct: 49  LLLAGIFAVIAFWLRGTLAGVLTFVGFAF-IDSLELWENAMITLSLVLVATVIALVISIP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+  ++ P+LD MQ++P + +L   +++F    P        A I A    
Sbjct: 108 VGIWAARSDRVSGLVRPVLDFMQTLPAMIYLIPAILFFGTGAP--------AGIVATLIF 159

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +          +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 160 ALAPGVRMTELGIRQVDKELVEAADAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  AI + ++     A + ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 6/166 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                +  V       ++  ++    +   D L +     IT+  V+V  +IA +I IPV
Sbjct: 49  LLLAGIFAVIAFWLRGTLAGVLTFVGFAFIDSLELWENAMITLSLVLVATVIALVISIPV 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S  ++P    +   PA ++    +           +   +  +       
Sbjct: 109 GIWAARSDRVSGLVRPVLDFMQTLPAMIYLIPAILFFGTGAPAGIVATLIFALA----PG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           +     G      +  E A +F  T       + LP   P  + G 
Sbjct: 165 VRMTELGIRQVDKELVEAADAFGTTPRNTLLRVQLPLALPTVMAGV 210


>gi|104779498|ref|YP_605996.1| taurine ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108485|emb|CAK13179.1| taurine ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 279

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + ++ A++  IPVG+ IG+       + P  +     P   + PL+V     
Sbjct: 85  GASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      LL+       I      G           A S   T  +  R++ILP   
Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSAL 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+L++ 
Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254

Query: 564 CFVLALN---RFLWHPLYLY 580
               AL    R L   L  +
Sbjct: 255 LIAFALEMGLRALQRKLVPW 274



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   +  R+  A++ + L           +R    +L P+++  + IP L +L  
Sbjct: 78  ASLWQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   +  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATQAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILLIALIAFALEMGLRALQRKLVPWH 275


>gi|332163281|ref|YP_004299858.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667511|gb|ADZ44155.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 296

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           LR           P S  +              P       S   +  ++ ++W     G
Sbjct: 7   LRDASLRPKATSLPASEALPPAPLNAKRPVRRLPAKKGLWLSIVTLVSVVVLWWAVTALG 66

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408
           +   +   +   +++                      ++ R+++ ++ A  + +P GI +
Sbjct: 67  LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   + P  ++    P   + PL+V        +      LL+       I    
Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +AG  +        A +   + W+   ++ILP   P  +TG     G  W+  + +E+ +
Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                  T GLG  +  + E  +   V+ G+ ++      +    R +   L  +
Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              ++  L   V  +G+I+ L     +  + + +V   P      +L Q+ + +  R+L 
Sbjct: 51  TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ ++            S  +  VL P+++I + +P L +L   V++F           
Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + I  I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++ 
Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253
            + + +  GW  +VA+E+I          G+G  +  A +      ++  +  +  + F 
Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276

Query: 254 --LYDQLLFRPMIVW 266
             L  + + R +  W
Sbjct: 277 MELSLRAIQRRLTPW 291


>gi|327439410|dbj|BAK15775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 253

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR     +IA ++ I +G+ +G  P +   + P  Q+L       + P 
Sbjct: 52  GSLFGHIQISLFRFFTGYLIAVVVAILLGLILGRLPAVWKVLDPVVQVLRPVSPIAWSPF 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V          N+   +++     + +L + ++        +  +AS+F ++ +   R 
Sbjct: 112 IVLWFGIG----NMPAIVIIFIAAFFPVLLSTVSSVKKVDKTYLRIASNFEMSTFETMRK 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILP  FP    G   A G AW   +  E+          +GLG  I ++    S   V+
Sbjct: 168 IILPASFPMIANGLHMALGSAWIFLVAGEMVG------AQSGLGFLIVDARNSLSLDLVM 221

Query: 557 LGVLIMCCFVLALNR 571
             ++++    L L++
Sbjct: 222 ACIVVIGVLGLLLDK 236



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 100/245 (40%), Gaps = 15/245 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P     L  ++V     ++  H       P  + + +   +   SL  +   +  R
Sbjct: 5   KKLSPITLGFLLLLVVWQAAIMIGGHQSALFPPPLKVGEALLAIISDGSLFGHIQISLFR 64

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
             +  +I+++   +   +  +   +  VL P++ +++ +  + +  F V++F        
Sbjct: 65  FFTGYLIAVVVAILLGLILGRLPAVWKVLDPVVQVLRPVSPIAWSPFIVLWFGIG----- 119

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + AI  IF +  + +  S   S+  + +    ++ +F +S ++    + +P S P 
Sbjct: 120 ---NMPAIVIIFIAAFFPVLLSTVSSVKKVDKTYLRIASNFEMSTFETMRKIILPASFPM 176

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + M++   W F+VA EM+          G+G  I  A     L  ++  ++ +  +
Sbjct: 177 IANGLHMALGSAWIFLVAGEMVG------AQSGLGFLIVDARNSLSLDLVMACIVVIGVL 230

Query: 252 IFLYD 256
             L D
Sbjct: 231 GLLLD 235


>gi|119898684|ref|YP_933897.1| putative sulfonate transport system permease [Azoarcus sp. BH72]
 gi|119671097|emb|CAL95010.1| putative sulfonate transport system, permease protein [Azoarcus sp.
           BH72]
          Length = 270

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 13/253 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              RF  P  +         + ++ I+          G         V    +  +  + 
Sbjct: 19  TAPRFRLPFAWEPWAF---AAVLVAIWQAIGSALAGSGNPLLPPPLTVLQALWDSLPELG 75

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                +   ++     A ++ + +G+  G  P ++    PFA++ A  P  V+ P  ++ 
Sbjct: 76  RGTVSSFLILIPGFGTALVLGVALGLAAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAV 135

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +  +HL+     + ++  G  W I  N  AGA A     ++ A       +   R +I P
Sbjct: 136 LPTFHLS----ATFVVFVGAFWPIFQNAAAGALAVEGRHRDNARVLGFGRFETLRKVIFP 191

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+  +G     G ++    V+E+           GLG ++    +   +P +V G+L
Sbjct: 192 AALPHIFSGMAVGLGFSFILLTVAELFG------ANAGLGRFVQYYADFADYPRMVAGIL 245

Query: 561 IMCCFVLALNRFL 573
                  A+   L
Sbjct: 246 YTGAVTWAVMSLL 258



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 14/252 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P F     +         V +   I   L G     +P  +  +  +   +  L +    
Sbjct: 21  PRFRLPFAWEPWAFAAVLVAIWQAIGSALAGSGNPLLPPPLTVLQALWDSLPELGRGTVS 80

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L ++     +L+        A  + RL     P   +   +P   ++ + +       
Sbjct: 81  SFLILIPGFGTALVLGVALGLAAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAVL---- 136

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                   L+A F +F    W +  +       +     + +R      ++    +  P 
Sbjct: 137 ----PTFHLSATFVVFVGAFWPIFQNAAAGALAVEGRHRDNARVLGFGRFETLRKVIFPA 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   M + +   +  +  +E+           G+G ++       D   ++  +L 
Sbjct: 193 ALPHIFSGMAVGLGFSFILLTVAELFGANA------GLGRFVQYYADFADYPRMVAGILY 246

Query: 248 MLGVIFLYDQLL 259
              V +    LL
Sbjct: 247 TGAVTWAVMSLL 258


>gi|53714621|ref|YP_100613.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis YCH46]
 gi|253565126|ref|ZP_04842582.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_2_5]
 gi|265765915|ref|ZP_06093956.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16]
 gi|52217486|dbj|BAD50079.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis YCH46]
 gi|251946591|gb|EES86968.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_2_5]
 gi|263253583|gb|EEZ25048.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16]
 gi|301164117|emb|CBW23673.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis 638R]
          Length = 274

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      + I  ++L    +      +  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   V+ PILD+MQ++P   +L   V++F            +  +F
Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +     + +AW   G  V  FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W          I P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|239978546|ref|ZP_04701070.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces albus J1074]
 gi|291450442|ref|ZP_06589832.1| glycine betaine transport system permease [Streptomyces albus
           J1074]
 gi|291353391|gb|EFE80293.1| glycine betaine transport system permease [Streptomyces albus
           J1074]
          Length = 457

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 99/234 (42%), Gaps = 18/234 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
           +L+ GI  ++   ++       ++  V   L +   L   A  T   +L A +++++ + 
Sbjct: 49  LLLAGIFAVIAWWLRGLLA--GVLSFVGFGLIISMELWDDAMATLSLVLVATLVAIVLSV 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA+SR +  VL P+LD MQ++P + +L   V++F     G   G     IFA+  
Sbjct: 107 PLGIWAARSRTVSAVLRPVLDFMQTMPGMVYLLPAVIFFGL---GAAPGIVATIIFAMPP 163

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  + ++L E + +F  +       + +P ++  ++  +   +  G 
Sbjct: 164 G-----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALSTIMAGVNQVIMLGL 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + M+          G+GS +   I + ++     A ++++ +    D+L
Sbjct: 219 SMVVIAGMVGAA-------GLGSSVYEGISQLNIGLGFEAGVSIVILAIYLDRL 265



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 86/282 (30%), Gaps = 19/282 (6%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +  F  ++        + L+     +   +  +                      I W+ 
Sbjct: 3   RLPFGEWVDSGVDWLQNNLAWLFDAISAVVKGLDTGINAVLTAPEPLLLAGIFAVIAWW- 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +   +A  +++   G I++   + D          T+  V+V  ++A ++ +P+GIW   
Sbjct: 62  LRGLLAGVLSFVGFGLIISMELWDD-------AMATLSLVLVATLVAIVLSVPLGIWAAR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +S+ ++P    +   P  V+    V           +   +          +     
Sbjct: 115 SRTVSAVLRPVLDFMQTMPGMVYLLPAVIFFGLGAAPGIVATIIF----AMPPGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      +  E A +F  T       + LP      + G         +  +++ +    
Sbjct: 171 GIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALSTIMAGVNQVIMLGLSMVVIAGMVG-- 228

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                  GLG+ + E   + +        + +    + L+R 
Sbjct: 229 -----AAGLGSSVYEGISQLNIGLGFEAGVSIVILAIYLDRL 265


>gi|78355721|ref|YP_387170.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218126|gb|ABB37475.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 279

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L I  + +L      +        +    +    L      T   +L A ++++L     
Sbjct: 52  LFIPAVALLTWRGTGSRGLGLFALLGLGLVYNMGLWPATVSTIALVLVATLLAVLIGLPL 111

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA ++     ++P+LD+MQ++P   +L   + +F           ++AAIF+     
Sbjct: 112 GVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFFGLG--------KVAAIFSTVVFA 163

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +P +L E + +F  + WQ+   L +P + P ++  +  ++      
Sbjct: 164 MPPVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPLAAPTIMAGVNQTVMLALSM 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + MI          G+G  +  AI+  ++     A + ++ V    D+LL
Sbjct: 224 VVIAAMI-------GAKGLGGEVWKAIQRLEMGRGFEAGIGIVIVAICLDRLL 269



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 11/198 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V  ++A +I +P+G++          I P   ++   PA V+    +       
Sbjct: 93  TIALVLVATLLAVLIGLPLGVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFFGLG- 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +      +      ++     G    P +  E A +F    W+  R + LP   P 
Sbjct: 152 ---KVAAIFSTVVFAMPPVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPLAAPT 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A +  +++ +           GLG  + ++ ++          + +   
Sbjct: 209 IMAGVNQTVMLALSMVVIAAMIG-------AKGLGGEVWKAIQRLEMGRGFEAGIGIVIV 261

Query: 566 VLALNRFLWHPLYLYGTR 583
            + L+R L         R
Sbjct: 262 AICLDRLLQKIGSRSARR 279


>gi|91772543|ref|YP_565235.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Methanococcoides burtonii DSM 6242]
 gi|91711558|gb|ABE51485.1| Glycine betaine ABC transporter permease protein [Methanococcoides
           burtonii DSM 6242]
          Length = 276

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F L+IGI    +            V ++ I  D   L   +  T   ++++  ++LL 
Sbjct: 51  IVFALIIGIAAYFIGRKDLKLAIGSTVGLLLI--DNMGLWVLSMETISLVITSASLALLI 108

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 ++AK+     ++ P+LD+MQ++P   +L   V++F     G V G     +FA+
Sbjct: 109 AIPLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGL---GNVPGLVATIVFAM 165

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  +P++L EV+ +F  + WQK   + +P ++P ++  +   +  
Sbjct: 166 PPA-----IRLTTLGIQQVPKELTEVADAFGSTPWQKLTKVELPTALPSIMAGVNQCIML 220

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          G+G  + + I+  D+     A L ++ +  + D+ 
Sbjct: 221 SLSMVVIAAMI-------GARGLGYQVLIGIQRVDIGQGFEAGLGIVIIAIILDRF 269



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 14/230 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           I +  ++   A  I  + +   +         D + +  L   T+  V+    +A +I I
Sbjct: 51  IVFALIIGIAAYFIGRKDLKLAIGSTVGLLLIDNMGLWVLSMETISLVITSASLALLIAI 110

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI           I+P   L+   P+ V+    V      ++   +   +        
Sbjct: 111 PLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGLGNVPGLVATIVF----AMP 166

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P +  EVA +F  T W+    + LP   P  + G       + +  +
Sbjct: 167 PAIRLTTLGIQQVPKELTEVADAFGSTPWQKLTKVELPTALPSIMAGVNQCIMLSLSMVV 226

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +    ++    +     L +    + L+RF
Sbjct: 227 IAAMIG-------ARGLGYQVLIGIQRVDIGQGFEAGLGIVIIAIILDRF 269


>gi|253573294|ref|ZP_04850637.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846822|gb|EES74827.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 274

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R +   ++A I+ IP+G+ IG+ P     + P  +L     A    P+ +  +   
Sbjct: 80  ASIVRSLSGFLLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       +++F   W IL N IA          + A S  ++  + +  +ILP   P
Sbjct: 140 ETSK----IAIVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A  GA    I +E+           GLG  I  S      P++  G+L +  
Sbjct: 196 TIFTGIRMAGTGAILVLIAAEMVG------AKEGLGYLITYSQYNFEIPKMYAGILAISL 249

Query: 565 FVLALN 570
             L +N
Sbjct: 250 LGLIIN 255



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 98/245 (40%), Gaps = 15/245 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLR 71
           R++      L+   L+      L         P  D++  +   +    L Q+ S + +R
Sbjct: 25  RKLVRQSIVLIGLFLLWEAAPRLGLVDPAFLPPFTDVIRSLVHLITSGELLQHFSASIVR 84

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS  +++L+       +         +L PIL++ ++   L  L   ++          
Sbjct: 85  SLSGFLLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIG----- 139

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + I  +  +  W +  +   ++ N+   L + ++S +LS  + F  + +P S+P 
Sbjct: 140 ---ETSKIAIVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVPT 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + M+ +G    ++A+EM+   +      G+G  I  +    ++  +   +L +  +
Sbjct: 197 IFTGIRMAGTGAILVLIAAEMVGAKE------GLGYLITYSQYNFEIPKMYAGILAISLL 250

Query: 252 IFLYD 256
             + +
Sbjct: 251 GLIIN 255


>gi|254466399|ref|ZP_05079810.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206687307|gb|EDZ47789.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 421

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +  +I+ IP+G  +G          P  + +   P     PLV+     + 
Sbjct: 230 SLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+     W +     AG S         A S   + W+  R++I+P   P 
Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   +  R+++  V   +           S        PI++ M+ +P L  +   
Sbjct: 222 SLWQHLGWSLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   S WQ 
Sbjct: 282 IIWFGIWETGK--------IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQI 333

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             ++ VP S+P +     ++M   W  VVA+E++  
Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369


>gi|164687918|ref|ZP_02211946.1| hypothetical protein CLOBAR_01563 [Clostridium bartlettii DSM
           16795]
 gi|164602331|gb|EDQ95796.1| hypothetical protein CLOBAR_01563 [Clostridium bartlettii DSM
           16795]
          Length = 256

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 95/253 (37%), Gaps = 17/253 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------LYVIWLGC 384
            ++    +   Y + +  F +   +     W           Y           +     
Sbjct: 1   MIRRVHERLKGYYIFVLVFILWIVICKLEIWNQYIMPTPQKVYTTFKKMIIDGSIFENIF 60

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R+ +   I+SI+ IP+G+  G +  +    +   + +   P     P+++      
Sbjct: 61  ISLKRIFIGYFISSILAIPLGMLFGCKSKLYKFFKLLLEFMRCTPPLALIPMLILWFGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++I  + + I  N ++G         EV   F+ + +  +  II+P    
Sbjct: 121 EKSK----IIIIILASFFPIFLNTLSGIKNCDPKLIEVGKVFNFSNFEIFSKIIIPNALV 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G     G ++ A I +E+ +       ++GLG  I++         V++G+L++  
Sbjct: 177 DIFVGLNLGLGYSFRAIIGAELIA------ASSGLGYLISDGRSMSRTDVVLVGILVIGF 230

Query: 565 FVLALNRFLWHPL 577
             + ++ F++  +
Sbjct: 231 LGI-ISEFIFRKI 242



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 15/244 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L F+L I I  + +        P+ +       +   S+ +    +  R+     IS +
Sbjct: 16  VLVFILWIVICKLEIWNQYIMPTPQKVYTTFKKMIIDGSIFENIFISLKRIFIGYFISSI 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L     +L      +L+ M+  P L  +   +++F      K+I   LA+ F 
Sbjct: 76  LAIPLGMLFGCKSKLYKFFKLLLEFMRCTPPLALIPMLILWFGIGEKSKIIIIILASFFP 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF         +    + N    L EV + F  S ++ F  + +P ++  +   + + + 
Sbjct: 136 IF--------LNTLSGIKNCDPKLIEVGKVFNFSNFEIFSKIIIPNALVDIFVGLNLGLG 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  ++ +E+I          G+G  I+          +L  +L +  +  + +  +FR
Sbjct: 188 YSFRAIIGAELIAASS------GLGYLISDGRSMSRTDVVLVGILVIGFLGIISE-FIFR 240

Query: 262 PMIV 265
            +I 
Sbjct: 241 KIIN 244


>gi|318607766|emb|CBY29264.1| taurine transport system permease protein TauC [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 296

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           LR           P S  +              P       +   +  ++ ++W     G
Sbjct: 7   LRDASLRPKATSLPASEALPPAPLNAKRPVRRLPAKKGLWLNIVTLVSVVVLWWAVTALG 66

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408
           +   +   +   +++                      ++ R+++ ++ A  + +P GI +
Sbjct: 67  LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   + P  ++    P   + PL+V        +      LL+       I    
Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +AG  +        A +   + W+   ++ILP   P  +TG     G  W+  + +E+ +
Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                  T GLG  +  + E  +   V+ G+ ++      +    R +   L  +
Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              ++  L   V  +G+I+ L     +  + + +V   P      +L Q+ + +  R+L 
Sbjct: 51  TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++ ++            S  +  VL P+++I + +P L +L   V++F           
Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + I  I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++ 
Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253
            + + +  GW  +VA+E+I          G+G  +  A +      ++  +  +  + F 
Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276

Query: 254 --LYDQLLFRPMIVW 266
             L  + + R +  W
Sbjct: 277 MELSLRAIQRRLTPW 291


>gi|261339268|ref|ZP_05967126.1| hypothetical protein ENTCAN_05506 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319127|gb|EFC58065.1| aliphatic sulfonates ABC transporter, permease protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 263

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R +         +V  +A    W S   + +     +  + + +         I+ +R 
Sbjct: 10  SRAAPWFLPVGIVLVWQLASSAGWLSTRILPSPEGVVEAFWSLSVSGELWQHLAISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G+  G        +    Q+L   P     PLV+            
Sbjct: 70  AIGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  + ++ILPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRTIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 18/264 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  VLV  + +             + V     +L V   L Q+ + ++ R     
Sbjct: 14  PWFLPVGIVLVWQLASSAGWLSTRILPSPEGVVEAFWSLSVSGELWQHLAISSWRAAIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I          ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  +  I R L E++RS+ LSG+  F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRTIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTTG 277
              Q L R  + W+  +  +    
Sbjct: 240 VSAQWLERSWLRWNPAYSPQEAKA 263


>gi|290958242|ref|YP_003489424.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22]
 gi|260647768|emb|CBG70873.1| putative binding-protein-dependent transport system [Streptomyces
           scabiei 87.22]
          Length = 324

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++   ++A+++ + VGI +         + P  +++   PA    P+ +       
Sbjct: 82  SLTRILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFP--- 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + +L +      A    ++E   +      R    ++LPG  P 
Sbjct: 139 -SNEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPGALPG 197

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +     ++P V +G+  +   
Sbjct: 198 IFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVNYPGVFVGMATIGVL 251

Query: 566 VLALN---RFLWHPLYLYGTR 583
               +     +   L  +  R
Sbjct: 252 GWLTSTAVELVGRRLTHWLPR 272



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 85/219 (38%), Gaps = 17/219 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L+  +++ +       L A+SR    +L P+L++++ IP +  +   ++ F    
Sbjct: 82  SLTRILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLF---- 137

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   +F  FT+  + +  S   ++  +    EE  R+      +    + +P 
Sbjct: 138 ----PSNEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPG 193

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PG+   + + +   W  V+++EMI          G+G          +   +   M T
Sbjct: 194 ALPGIFGGLSVGIGVSWICVISAEMISG------QYGVGYRTWQDYTVVNYPGVFVGMAT 247

Query: 248 MLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADS 283
           +  + +L      L+ R +  W  +      T      +
Sbjct: 248 IGVLGWLTSTAVELVGRRLTHWLPRTSAAPATRPRGPRT 286


>gi|23500901|ref|NP_700341.1| taurine ABC transporter permease [Brucella suis 1330]
 gi|81750864|sp|Q8FUN2|Y4188_BRUSU RecName: Full=Probable ABC transporter permease protein BRA1188
 gi|23464571|gb|AAN34346.1| taurine ABC transporter, permease protein [Brucella suis 1330]
          Length = 250

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSPIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L      
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242

Query: 577 LYLYGTR 583
           L  +  R
Sbjct: 243 LTQWQER 249



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 17/245 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L    R     + P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGWYRIARSPIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL    R + 
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244

Query: 265 VWSNK 269
            W  +
Sbjct: 245 QWQER 249


>gi|152984113|ref|YP_001351148.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959271|gb|ABR81296.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 283

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +P  ++  +   +    L     +T   ML A  IS+L     
Sbjct: 54  LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   IAW +   ++       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V   I+ +I IP+GI       + + + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G     N+  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +  + +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|222102562|ref|YP_002539601.1| sulfate ester transporter permease protein [Agrobacterium vitis S4]
 gi|221739163|gb|ACM39896.1| sulfate ester transporter permease protein [Agrobacterium vitis S4]
          Length = 261

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 13/199 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      + LR LS   I  +    + TL   ++    +++P  + ++ I +L ++   
Sbjct: 62  GLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLI 121

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            ++F      K++   LAA           +  + +  +  +PRDL EV R+ R S  Q+
Sbjct: 122 SIWFGFGEQAKIVFVALAAFI--------PIALNTFDGIRQVPRDLIEVGRALRFSPRQR 173

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P +   + + +   W   V +E  +        PGIG  +    +  D+ 
Sbjct: 174 IFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVG-----PGIGGLVIAGRERFDMS 228

Query: 240 AILYAMLTMLGVIFLYDQL 258
            ++  ++ +  V F++++L
Sbjct: 229 LVMVGVIILGLVGFIFNRL 247



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 9/189 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +    I +++ I  G  +         + P    L       + PL+     +
Sbjct: 68  GASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLISIWFGF 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     + +       I  N   G    P D  EV  +   +  +    I LP   
Sbjct: 128 G----EQAKIVFVALAAFIPIALNTFDGIRQVPRDLIEVGRALRFSPRQRIFTIYLPSAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG       +W A++ +E            G+G  +    E+     V++GV+I+ 
Sbjct: 184 PMIATGVHLGLIYSWLATVGAEYFL-----AVGPGIGGLVIAGRERFDMSLVMVGVIILG 238

Query: 564 CFVLALNRF 572
                 NR 
Sbjct: 239 LVGFIFNRL 247


>gi|29833258|ref|NP_827892.1| glycine betaine ABC transport system permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29610380|dbj|BAC74427.1| putative glycine betaine ABC transport system permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 871

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ ++   ++ T+            +D   L + A  T   +L A VI+L+ +  
Sbjct: 49  LLLAGILAVIAFWLRGTSAGVLTFVGFAF-IDSLELWEDAMVTLSLVLVATVIALVVSVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+  ++ P+LD MQ++P + +L   +++F    P        A I A    
Sbjct: 108 VGIWAARSDRVSSIVRPVLDFMQTLPAMIYLIPAILFFGTGAP--------AGIVATLIF 159

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +          +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 160 ALAPGVRMTELGIRQVDKELVEAADAFGTTPRNILLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  AI + ++     A + ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 12/220 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +  F  ++  +     + +S       +T+ +  F   +  LQ      ++ +L +  F 
Sbjct: 3   RIPFGDWVNDTVDWLLNHMSWLFD-FFKTVFLGAFDGIDAVLQAPQPLLLAGILAVIAFW 61

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +    A  + +    +I +   ++D         +T+  V+V  +IA ++ +PVGIW   
Sbjct: 62  LRGTSAGVLTFVGFAFIDSLELWED-------AMVTLSLVLVATVIALVVSVPVGIWAAR 114

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +SS ++P    +   PA ++    +           +   +  +       +     
Sbjct: 115 SDRVSSIVRPVLDFMQTLPAMIYLIPAILFFGTGAPAGIVATLIFALA----PGVRMTEL 170

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           G      +  E A +F  T       + LP   P  + G 
Sbjct: 171 GIRQVDKELVEAADAFGTTPRNILLRVQLPLALPTVMAGV 210


>gi|225575131|ref|ZP_03783741.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037690|gb|EEG47936.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM
           10507]
          Length = 299

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++   +     A II +P+G+ +G+  +    I+P  +L+   P   + PLVV  +  
Sbjct: 106 LASLQVALSGFCAAIIIGVPLGLLMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGV 165

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L++ F      + N   G         +V+ +F  +    +  + +P   
Sbjct: 166 GLK----AKALIIFFTAFVPCVINSYTGIKLTNKTLIDVSRTFGASNREIFWKVGVPSSL 221

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   A G +W+  + +E+ +       T GLG  I           V++G++++ 
Sbjct: 222 PMVFAGIRVALGNSWSTLVAAEMLA------ATAGLGYMIQIGRTVARPDIVIVGMVVIG 275

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 276 AIGAVLSLIL 285



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 100/261 (38%), Gaps = 23/261 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITL-----DVHSLPQYASRT 68
           IF +   +L  +++  +  +     ++    P  I+D +   +     D + L      +
Sbjct: 49  IFLSAAGILTVLVIWQLAVVTGLVNEKMLPAPTKILDTLIYKIGNKAPDGNVLGIDILAS 108

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               LS    +++       L          + PI ++++ +P + ++   VV+      
Sbjct: 109 LQVALSGFCAAIIIGVPLGLLMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGVGLK 168

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K +         IF +       + Y  +    + L +VSR+F  S  + FW +GVP S
Sbjct: 169 AKAL--------IIFFTAFVPCVINSYTGIKLTNKTLIDVSRTFGASNREIFWKVGVPSS 220

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + +++   W  +VA+EM+          G+G  I +         ++  M+ +
Sbjct: 221 LPMVFAGIRVALGNSWSTLVAAEMLA------ATAGLGYMIQIGRTVARPDIVIVGMVVI 274

Query: 249 LGVIFLYDQLLFR---PMIVW 266
             +  +   +L R     + W
Sbjct: 275 GAIGAVLSLILSRAEKYFLRW 295


>gi|253990652|ref|YP_003042008.1| glycine betaine transporter membrane protein [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782102|emb|CAQ85266.1| glycine betaine/l-proline transport system permease protein prow
           [Photorhabdus asymbiotica]
          Length = 361

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         ++S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 163 FCIIIGLPLGLWLSRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLFG---IGNVPGVIVT 219

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  + 
Sbjct: 220 IIFA-----LPPIVRLTILGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVN 274

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  L D+
Sbjct: 275 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAILLDR 327

Query: 258 L 258
           L
Sbjct: 328 L 328



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII-----IASIIWIPVG 405
           V   +   IAWQ  G  +   +   ++ +  +G  +   V + +         II +P+G
Sbjct: 113 VAIMLFALIAWQLSGIGMGIASLASLIVIGAIGAWSEAMVTLALALTSLLFCIIIGLPLG 172

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +W+      +  I+P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 173 LWLSRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLFGIG----NVPGVIVTIIFALPPIV 228

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P D  E A SF  +  +    + LP   P  + G       A +  +++ 
Sbjct: 229 RLTILGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 288

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 289 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAILLDRL 328


>gi|255010825|ref|ZP_05282951.1| glycine betaine/L-proline transport system permease [Bacteroides
           fragilis 3_1_12]
 gi|313148627|ref|ZP_07810820.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137394|gb|EFR54754.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 274

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      + I  ++L    +      +  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYLTIAAMVLLAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   V+ PILD+MQ++P   +L   V++F            +  +F
Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +     + +AW   G  V  FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYLTIAAMVLLAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W          I P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|229590252|ref|YP_002872371.1| putative integral membrane transport protein [Pseudomonas
           fluorescens SBW25]
 gi|229362118|emb|CAY49020.1| putative integral membrane transport protein [Pseudomonas
           fluorescens SBW25]
          Length = 274

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 23/272 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLP 62
           P  I+R  +P     L    +I ++  ++  +      +   P +I  +    L   +L 
Sbjct: 14  PVAINRSAWPRRLKGLVVPALILLVLEVVVRVGWLPSYQMPAPSEIA-VTLTDLAEGALW 72

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ S +  R+L    I      V+A     SR     L P    ++SIP L ++   +++
Sbjct: 73  KHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       E + I  I     + +  +   ++ +I R L EV + +  +  +    
Sbjct: 133 LGID--------ETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFNRRRLVRR 184

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PGL   +   +S  W F+VA+E+I          G+G  ++   +      +L
Sbjct: 185 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVL 238

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271
            A++ +  +  + D LL    +  + W + F+
Sbjct: 239 AAIIVLALLGKVSDGLLAALEKRCLAWRDTFQ 270



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 93/264 (35%), Gaps = 16/264 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           +      +    P    +    +R+  ++      +V  V + + W     +        
Sbjct: 2   MTSKTQALPLAAPVAINRSAWPRRLKGLVVPALILLVLEVVVRVGWLPSYQMPAPSEIAV 61

Query: 376 VLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            L  +  G +      ++ RV++   I + + +    W+G      + ++P    L + P
Sbjct: 62  TLTDLAEGALWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIP 121

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +  + PL++  +     +      +L+  G  + +  N +A          EV   +   
Sbjct: 122 SLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFN 177

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             R  R I+LP   P   TG  +    AW   + +E+ +       T GLG  +++  E 
Sbjct: 178 RRRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRET 231

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                V+  ++++       +  L
Sbjct: 232 SRPDIVLAAIIVLALLGKVSDGLL 255


>gi|124485204|ref|YP_001029820.1| hypothetical protein Mlab_0377 [Methanocorpusculum labreanum Z]
 gi|124362745|gb|ABN06553.1| binding-protein-dependent transport systems inner membrane
           component [Methanocorpusculum labreanum Z]
          Length = 253

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 9/189 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++++RV +  IIA +I +P+GI +G  P +        Q+L   P   + PL ++     
Sbjct: 59  VSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPLSLAWFGLG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  +++ G  + IL N I G       + E A  +     +    +I+P   P
Sbjct: 119 LT----PILFIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQIITKVIIPAAGP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G     G AW + + +E+          +GLG  I  +   G    V+ G++ +  
Sbjct: 175 AIWNGLRVGFGIAWMSVVAAEMMPG-----TVSGLGYLIMYTYNWGQVQMVIAGMIAIGI 229

Query: 565 FVLALNRFL 573
             +A+++F 
Sbjct: 230 IGIAMDQFF 238



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL + +  +  R+    +I+ +       +  +   L      ++ I++ IP + ++  
Sbjct: 51  GSLVENSWVSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPL 110

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++ +F               +F I    ++ +  +    +  + R   E ++ ++ +  Q
Sbjct: 111 SLAWFGLGLTP--------ILFIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQ 162

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P +   + +     W  VVA+EM+        + G+G  I        +
Sbjct: 163 IITKVIIPAAGPAIWNGLRVGFGIAWMSVVAAEMMPG-----TVSGLGYLIMYTYNWGQV 217

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  M+ +  +    DQ  
Sbjct: 218 QMVIAGMIAIGIIGIAMDQFF 238


>gi|222148899|ref|YP_002549856.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735885|gb|ACM36848.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 304

 Score =  121 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 16/237 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D    V++  +  I+    +   +       + + + +  L Q    T   +    + ++
Sbjct: 66  DTPWIVMIFALAAIVYGVSRNWRITLGTALAM-VLIGMAGLWQDTMITLAMVTVCTLCAV 124

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R    L P+LD+MQ++P   +L   V+ F     GKV G     I+
Sbjct: 125 VIGIPLGIWMARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIFG---IGKVPGLIAVVIY 181

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AI       +       +  + R+  E + +F  S  QK + + +P ++P ++  +  ++
Sbjct: 182 AIA-----PIIRLTNLGIRLVSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTI 236

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 VV + MI VG       G+G  +  AI  Q     L     ++ +  ++D+
Sbjct: 237 MMSLAMVVIASMIGVG-------GLGKNVLQAITNQFFTIGLLNGFALVAIAIIFDR 286



 Score = 78.0 bits (191), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +  + + +        +   W+             +  +     IT+  V V  + A +I
Sbjct: 67  TPWIVMIFALAAIVYGVSRNWRITLGTALAMVLIGMAGLWQDTMITLAMVTVCTLCAVVI 126

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GIW+       S + P   ++   P+ V+   VV       +   + + +  I   
Sbjct: 127 GIPLGIWMARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIFGIGKVPGLIAVVIYAIA-- 184

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+     G      +  E A +F  +  +    + +P   P  + G       +   
Sbjct: 185 --PIIRLTNLGIRLVSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTIMMSLAM 242

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +   G       GLG  + ++     F   +L    +    +  +R
Sbjct: 243 VVIASMIGVG-------GLGKNVLQAITNQFFTIGLLNGFALVAIAIIFDR 286


>gi|221308723|ref|ZP_03590570.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221313046|ref|ZP_03594851.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221317971|ref|ZP_03599265.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221322245|ref|ZP_03603539.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321314608|ref|YP_004206895.1| aliphatic sulfonate ABC transporter permease [Bacillus subtilis
           BSn5]
 gi|320020882|gb|ADV95868.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           BSn5]
          Length = 275

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 97/277 (35%), Gaps = 16/277 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L +T        P           +   + I  + V+ G+ +  A      +  
Sbjct: 3   AEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTI 62

Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             T++++     +     I+++R  +  ++ + + + +GI  GF       + P  Q+L 
Sbjct: 63  VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +    +      +   LL+  G  + +  N   G         EVA   
Sbjct: 123 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                +    +ILP   P  + G   + G AW   +V+E+         ++G+G  I ++
Sbjct: 179 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSSGVGYMIMDA 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +     +V  G++I        +   R L   L  +
Sbjct: 233 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 269



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              + +  +I  L +        P  IV      +    L  +   +  R     ++   
Sbjct: 36  AVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  S+R  + L P L +++++P L      +++F      K++   L A F 
Sbjct: 96  LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L EV+R       Q+   + +P ++P ++  + +S+ 
Sbjct: 156 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          G+G  I  A +      +   ++    V  L D   +L
Sbjct: 208 IAWLGLVVAELMGSSS------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 261

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 262 LERKLLKWRNSYE 274


>gi|167031249|ref|YP_001666480.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857737|gb|ABY96144.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 534

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 75/548 (13%), Positives = 177/548 (32%), Gaps = 72/548 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L+ G+ +      ++      +V    +      L  +   +  R+   + + +  
Sbjct: 41  VLIALLWGVASRQHWMSEQILPAPALVWQSALEFGAGELWGHLWISLQRLFWGLAVGIGS 100

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SR+   +++P    +  IP L ++   +++F      K++    A +  +
Sbjct: 101 GLLLGVWLGASRQAQTLVLPTFVALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV 160

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                   T      + +    L E + + RL     F  L +P ++P  +  + ++++ 
Sbjct: 161 --------TLHTLVGVRDAQPKLREAAAALRLPRHLLFLRLLLPAALPAFLTGVRLALAT 212

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           GW  ++A E++   +      GIG  +    +   L  +L  +L    VI L   +L R 
Sbjct: 213 GWTSLLAVELLASSE------GIGYLMVWGRQLFMLDLVLLCIL----VIGLVGAVLERS 262

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN-VKKLCRTLG 321
                ++                +    ++  L     + W   S         L   L 
Sbjct: 263 FSALEHRLLYWPQPATGEHQRGAVPRGWQSLLLPLAILALWQASSSFGWVDPNILTSPLE 322

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
           V+R                          ++ G+A G   Q++                 
Sbjct: 323 VLR-------------------------TLLVGLADGSLPQAL----------------- 340

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +++ R +  +++     +  G+ +G   +      P    L       + PL+ +  
Sbjct: 341 --LLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFGPSLTALRQVALFAWVPLLTAWF 398

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  ++     +     + +L     G +       E A +  +  W+  R ++LPG
Sbjct: 399 GLGEGAKHV----FVGLAAFFPLLIATQRGIAGLSPQLGEAARTLRLGLWQRLRLLVLPG 454

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P    G   +   AW  +I +E            G+ + +  + +     +V+  +L+
Sbjct: 455 AAPGIFAGLRLSLIYAWLGTIGAEYFMPSD-----GGIASLMIGAQQLFRMDQVMAAMLL 509

Query: 562 MCCFVLAL 569
           +      L
Sbjct: 510 IGLVGALL 517



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T P +++  + + L   SLPQ    +  R L+ +++      +   +   SR    +  
Sbjct: 317 LTSPLEVLRTLLVGLADGSLPQALLLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFG 376

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  ++ + +  ++     +F      K +   LAA F         +  +  + +  +
Sbjct: 377 PSLTALRQVALFAWVPLLTAWFGLGEGAKHVFVGLAAFF--------PLLIATQRGIAGL 428

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E +R+ RL  WQ+   L +P + PG+   + +S+   W   + +E  +  D    
Sbjct: 429 SPQLGEAARTLRLGLWQRLRLLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYFMPSD---- 484

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GI S +  A +   +  ++ AML +  V  L   L  + +   + ++R
Sbjct: 485 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGTL-GQRLESRATRWR 532



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 28/263 (10%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G        +  ++ S +RV   L      ++ GVA    W S   +             
Sbjct: 15  GPFAAQGRSHRDRILSVERVLPWLLPVLIALLWGVASRQHWMSEQILPAPALVWQSALEF 74

Query: 381 WLGC------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA---- 430
             G       I++ R+   + +     + +G+W+G      + + P       F A    
Sbjct: 75  GAGELWGHLWISLQRLFWGLAVGIGSGLLLGVWLGASRQAQTLVLP------TFVALAQI 128

Query: 431 --NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + PL +       L   + L   ++         + + G        +E A++  +
Sbjct: 129 PTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TLHTLVGVRDAQPKLREAAAALRL 184

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                +  ++LP   P ++TG   A    W + +  E+ +       + G+G  +    +
Sbjct: 185 PRHLLFLRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYLMVWGRQ 238

Query: 549 KGSFPEVVLGVLIMCCFVLALNR 571
                 V+L +L++      L R
Sbjct: 239 LFMLDLVLLCILVIGLVGAVLER 261


>gi|319443151|ref|ZP_07992307.1| binding-protein-dependent transport systems inner membrane
           component [Corynebacterium variabile DSM 44702]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 106/279 (37%), Gaps = 25/279 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLY 378
                   ++   + +       L I     +  +A      ++  +   F  +  DV++
Sbjct: 5   APRTAGKRKHRSVIPAPVSRKKYLTIAAASFIVVLAAWWLITALELVDATFLPSPADVVH 64

Query: 379 VIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           VI              I+++RV+V  ++A ++ +P+G++ G  P   + I+P    +   
Sbjct: 65  VISDTATNGQLWSDMRISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLTDFIRYM 124

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F PL +  V            L++  GT + ++  V       P  ++ + ++  +
Sbjct: 125 PVVAFVPLTIIWVGTEDSQK----FLIIWLGTFFQMVLMVADAVRQVPRSYQNLGATLGM 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                  +I++P   P          G AW+  +V+E+ +       ++G+G  I ++  
Sbjct: 181 GRLSILSHIVVPAALPRIWDTLRLCLGWAWSWLVVAELVA------ASSGMGYRITQAQR 234

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584
             +   ++  V+++    L  ++ +      ++ Y    
Sbjct: 235 FLATDTIIAYVIVLGLLGLIFDQIMRAAGRRMFRYLEAR 273



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++       I  + L        P D+V ++  T     L      +  R++   V++++
Sbjct: 36  IVVLAAWWLITALELVDATFLPSPADVVHVISDTATNGQLWSDMRISVWRVMVGYVLAVV 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   A  S R    + P+ D ++ +P++ F+  T+++       K +         
Sbjct: 96  LAVPIGVFAGSSPRAEAAIEPLTDFIRYMPVVAFVPLTIIWVGTEDSQKFL--------I 147

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+    + M   +  ++  +PR  + +  +  +       ++ VP ++P +   + + + 
Sbjct: 148 IWLGTFFQMVLMVADAVRQVPRSYQNLGATLGMGRLSILSHIVVPAALPRIWDTLRLCLG 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W ++V +E++          G+G  I  A +      I+  ++ +  +  ++DQ++
Sbjct: 208 WAWSWLVVAELVAASS------GMGYRITQAQRFLATDTIIAYVIVLGLLGLIFDQIM 259


>gi|294676941|ref|YP_003577556.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294475761|gb|ADE85149.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 14/269 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +R   P            + +L ++W     G+   +     G ++     Q    ++W
Sbjct: 16  RLRKDIPHWLFTSAGVVFPALLLLMWWLVTEFGLVKPLFLPGPGDVLAEGVRQAREGILW 75

Query: 382 LGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               ++++R+    + A+++ +PVGI +G    I   ++PF   +   P     PL +  
Sbjct: 76  ADASVSIYRICAGWLAATVLAVPVGILMGNFRLIEGALEPFVSTIRYMPVVALIPLTILW 135

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                        L++  GT +  +  V+        +      +   +       IILP
Sbjct: 136 AGIGDGQK----ILILFLGTFFQQVLMVMDNVKTIDMNLIRAGQTLGFSNREILIRIILP 191

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P          G  W   +V+E+ +         GLG  I ++    +   ++ G L
Sbjct: 192 AAAPGIWDTLRITIGWTWTYLVVAELVA------ANEGLGRRIMDAQRYLATETILFGTL 245

Query: 561 IMCCFVLALNRFL---WHPLYLYGTRCLR 586
            +       +         L+ +  +  R
Sbjct: 246 FIGFLGFLTDVVFKRTGRVLFAWHQQRTR 274



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 92/253 (36%), Gaps = 17/253 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F  L  ++   +    L        P D++           L   AS +  R+ +  + 
Sbjct: 32  VFPALLLLMWWLVTEFGLVKPLFLPGPGDVLAEGVRQAREGILWADASVSIYRICAGWLA 91

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + +       L    R +   L P +  ++ +P++  +  T+++       K        
Sbjct: 92  ATVLAVPVGILMGNFRLIEGALEPFVSTIRYMPVVALIPLTILWAGIGDGQK-------- 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +F    +     +  ++  I  +L    ++   S  +    + +P + PG+   + +
Sbjct: 144 ILILFLGTFFQQVLMVMDNVKTIDMNLIRAGQTLGFSNREILIRIILPAAAPGIWDTLRI 203

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W ++V +E++   +      G+G  I  A +      IL+  L +  + FL D +
Sbjct: 204 TIGWTWTYLVVAELVAANE------GLGRRIMDAQRYLATETILFGTLFIGFLGFLTDVV 257

Query: 259 L---FRPMIVWSN 268
                R +  W  
Sbjct: 258 FKRTGRVLFAWHQ 270


>gi|85059883|ref|YP_455585.1| glycine betaine transporter membrane protein [Sodalis glossinidius
           str. 'morsitans']
 gi|84780403|dbj|BAE75180.1| glycine betaine/L-proline ABC transporter permease component
           [Sodalis glossinidius str. 'morsitans']
          Length = 349

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + ++   L   Q +T+      +V  I +        A  T   +L++++  +
Sbjct: 94  LLGLPAPVAMVIFALLAWQMSTLSMGAATLVSLIIIGSIGAWSQAMVTLALVLTSLLFCV 153

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 154 IIGLPLGIWLARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 210

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P ++P ++  +  ++
Sbjct: 211 A-----LPPIVRLTILGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTL 265

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 266 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 316



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L      V   +   +AWQ     +   T   ++ +  +G      +T+  V+  ++ 
Sbjct: 92  HLLLGLPAPVAMVIFALLAWQMSTLSMGAATLVSLIIIGSIGAWSQAMVTLALVLTSLLF 151

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             II +P+GIW+      +  I+P    +   PA V+   +V          N+   ++ 
Sbjct: 152 CVIIGLPLGIWLARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVT 207

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      I+   I G    P D  E A SF  +  +    + LP   P  + G       
Sbjct: 208 IIFALPPIVRLTILGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTLML 267

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 268 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 316


>gi|134299432|ref|YP_001112928.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134052132|gb|ABO50103.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 254

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 19/255 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           F +   +L++ +I      I +     P  ++           L ++ + +  R+ +  +
Sbjct: 7   FVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFL 66

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++LF F  A L   ++RL   + P+LD +  IP +  +   +++F      K+    LA
Sbjct: 67  LTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKLAVIILA 126

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +F         +    +    + L EV   F  +   KF  + +P ++P ++    
Sbjct: 127 TFFPVF--------LNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFR 178

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +   W  ++ +E+I          GIG  I  A +      I+  +LT+    ++ D 
Sbjct: 179 LGLGYSWRSLIGAELIAASS------GIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDY 232

Query: 258 LLFRP---MIVWSNK 269
             F+    +I W+ K
Sbjct: 233 CFFKLTNHLIPWAGK 247



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 87/238 (36%), Gaps = 12/238 (5%)

Query: 340 VSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           + +++ I W       +I   I       +           ++    I+++RV    ++ 
Sbjct: 9   IPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFLLT 68

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +   P+ I +G    ++  I P    L   P     P+++        +       ++I
Sbjct: 69  VLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSK----LAVII 124

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             T + +  N + G         EV   F  T    +  I++P   P  + G     G +
Sbjct: 125 LATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFRLGLGYS 184

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           W + I +E+ +       ++G+G  I ++ +      +++G+L +  F   ++   + 
Sbjct: 185 WRSLIGAELIA------ASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFK 236


>gi|241765577|ref|ZP_04763535.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241364605|gb|EER59654.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 278

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 20/263 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------YVI 380
           P +       +       +     +        W +   + +     D L        + 
Sbjct: 19  PLHTAGQWLVRHSGRFGLVVLLLGIWQALCSAGWANPALLPSPAAVADTLWHLLREGDLQ 78

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                +  RV+    IA+   + +GI +G    +   +    Q+L   P   + PL +  
Sbjct: 79  RHVEASAARVLQGFAIAAAAALALGIAMGAYRRLDGFVDLLIQILKPVPPIAWIPLAILW 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         ++  G  + IL + +         F E+A    +    + R I+LP
Sbjct: 139 FGI----DEGAKIFIIALGAFFPILVSSVDAVRQTDGRFVELARVLELPRGLFIRRIMLP 194

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  ++G       AW   + +E+ +       + G+G  I +         VV G+ 
Sbjct: 195 GSLPQIMSGLRLGLAMAWMCVVAAELIA------ASRGVGFLIMDGRAMSQADLVVAGMA 248

Query: 561 IMCCFVLALNRFLW---HPLYLY 580
           +M       +  L      L  +
Sbjct: 249 LMGVLGKLTDDLLRHAEQRLVRW 271



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 93/259 (35%), Gaps = 19/259 (7%)

Query: 18  NIFDLLAFVL-VIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
             F L+  +L +   +             P  + D +   L    L ++   +  R+L  
Sbjct: 32  GRFGLVVLLLGIWQALCSAGWANPALLPSPAAVADTLWHLLREGDLQRHVEASAARVLQG 91

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             I+              RRL   +  ++ I++ +P + ++   +++F           E
Sbjct: 92  FAIAAAAALALGIAMGAYRRLDGFVDLLIQILKPVPPIAWIPLAILWFGID--------E 143

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A IF I     + +  S   ++        E++R   L        + +P S+P ++  
Sbjct: 144 GAKIFIIALGAFFPILVSSVDAVRQTDGRFVELARVLELPRGLFIRRIMLPGSLPQIMSG 203

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + + ++  W  VVA+E+I          G+G  I           ++  M  M  +  L 
Sbjct: 204 LRLGLAMAWMCVVAAELIAAS------RGVGFLIMDGRAMSQADLVVAGMALMGVLGKLT 257

Query: 256 DQLL---FRPMIVWSNKFR 271
           D LL    + ++ W  +F 
Sbjct: 258 DDLLRHAEQRLVRWRPQFE 276


>gi|329907288|ref|ZP_08274605.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Oxalobacteraceae bacterium IMCC9480]
 gi|327547038|gb|EGF31925.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Oxalobacteraceae bacterium IMCC9480]
          Length = 412

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 19/236 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA V + G++     G            I  + + +  +   A  T   +L+++   L+ 
Sbjct: 138 LAMVTIFGLLAWQFAGRGVAIGTV----ISLLVVVLLGIWPEAMVTLSLVLTSLAFCLVI 193

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L A S R   +  P+LD MQ+ P   +L   V+ F     G V G  +  +FA 
Sbjct: 194 GLPLGVLLASSDRAQRLTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIVFA- 249

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +       +  +  DL E +R++  S  Q  + + +P ++P ++  +  ++  
Sbjct: 250 ----LPPLVRLTNLGIRQVRPDLIEAARAYGASPAQMLFKVQLPLALPSIMAGVNQTLML 305

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI VG       G+G  +   I   D+       L ++ +    D++
Sbjct: 306 SLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRI 354



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 19/281 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T    +I +    F +      + +   +        +    + S   V+    + W   
Sbjct: 93  TPVESWINHGLDWFVTQFRPFFQTVRAPIDGTLMWVQDLLQSIPSLAMVTIFGLLAWQFA 152

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             GVAIG     +  ++     +          +T+  V+  +    +I +P+G+ +   
Sbjct: 153 GRGVAIGTVISLLVVVLLGIWPE--------AMVTLSLVLTSLAFCLVIGLPLGVLLASS 204

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                  +P    +   PA V+   VV          N+   ++ I      ++     G
Sbjct: 205 DRAQRLTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLVRLTNLG 260

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A ++  +  +    + LP   P  + G       + +  +++ + + G 
Sbjct: 261 IRQVRPDLIEAARAYGASPAQMLFKVQLPLALPSIMAGVNQTLMLSLSMVVIASMIAVG- 319

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +     +       +G L +    ++L+R 
Sbjct: 320 ------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRI 354


>gi|237723326|ref|ZP_04553807.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_2_4]
 gi|293373152|ref|ZP_06619514.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|298480784|ref|ZP_06998980.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. D22]
 gi|229447848|gb|EEO53639.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_2_4]
 gi|292631800|gb|EFF50416.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|298273218|gb|EFI14783.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. D22]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ +      +      I   + + L       +   +T   + S+  ++L
Sbjct: 41  LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V     +
Sbjct: 39  HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|170021256|ref|YP_001726210.1| taurine transporter subunit [Escherichia coli ATCC 8739]
 gi|194438856|ref|ZP_03070941.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|253774648|ref|YP_003037479.1| taurine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160436|ref|YP_003043544.1| taurine transporter subunit [Escherichia coli B str. REL606]
 gi|297516855|ref|ZP_06935241.1| taurine transporter subunit [Escherichia coli OP50]
 gi|300930341|ref|ZP_07145753.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|169756184|gb|ACA78883.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|194422150|gb|EDX38152.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|242376149|emb|CAQ30838.1| tauC, subunit of taurine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325692|gb|ACT30294.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972337|gb|ACT38008.1| taurine transporter subunit [Escherichia coli B str. REL606]
 gi|253976546|gb|ACT42216.1| taurine transporter subunit [Escherichia coli BL21(DE3)]
 gi|300461801|gb|EFK25294.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|309700630|emb|CBI99926.1| taurine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|323938554|gb|EGB34803.1| inner membrane transport system [Escherichia coli E1520]
 gi|323963355|gb|EGB58917.1| inner membrane transport system [Escherichia coli H489]
          Length = 275

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGENSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 104/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ENSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + ++ +     +RS   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|119383697|ref|YP_914753.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119383939|ref|YP_914995.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119373464|gb|ABL69057.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119373706|gb|ABL69299.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 296

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ ++  L  G   +        +  + + +  +     +T   +L+A ++S+     
Sbjct: 62  PVILLVVAGLAWGASRSLRVVIGSVLTLVLIGLFGMWADTMKTISMVLAATLLSIAIGLP 121

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S R+  V+ PILDIMQ++P   +L   V+       G+V G     I+A    
Sbjct: 122 LGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVVMLLG---IGRVPGLIAVVIYA---- 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M       +  +  ++ E + +F  S WQK     +P ++P ++  +  ++     
Sbjct: 175 -LPPMIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLPLALPTIMAGINQTIMMALA 233

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  AI  Q     L+    ++G+  L+D++
Sbjct: 234 MVVIASMIGV-------QGLGQPVLRAISNQYFTLGLFNGFAIVGIAILFDRI 279



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 19/289 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS--YMLDIFWF 349
           T++L      S +    L  ++    R+         E F        +    +L    +
Sbjct: 2   TSWLTSFPQLSDSLLRALQRSIDNGFRSFTRSYGDLIEGFFSPLQTLLIWFERLLLGTPW 61

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIP 403
            V+  V  G+AW +   +         L +I L  +      T+  V+   +++  I +P
Sbjct: 62  PVILLVVAGLAWGASRSLRVVIGSVLTLVLIGLFGMWADTMKTISMVLAATLLSIAIGLP 121

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+ +     +   + P   ++   P+ V+   VV  +    +   + + +         
Sbjct: 122 LGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVVMLLGIGRVPGLIAVVIY----ALPP 177

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G      +  E   +F  + W+      LP   P  + G       A    ++
Sbjct: 178 MIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLPLALPTIMAGINQTIMMALAMVVI 237

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +  +     F   +     +    +  +R 
Sbjct: 238 ASMIG-------VQGLGQPVLRAISNQYFTLGLFNGFAIVGIAILFDRI 279


>gi|192362106|ref|YP_001982720.1| ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190688271|gb|ACE85949.1| ABC transporter, permease protein [Cellvibrio japonicus Ueda107]
          Length = 266

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 18/260 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R H P  + +L            FW+ +           +  Y+       D  + +
Sbjct: 1   MNTRAHRPRQWQRLALQTSSLLACLAFWY-LASTYKFNFGVIAFTYVPTPGAVADAAWNL 59

Query: 381 WLG-------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +          ++ RV      A+++ I +G+ IG    + S + P  ++L   PA  +
Sbjct: 60  VISSKLLPHLGSSLSRVFAGYFSAALLGIALGLLIGRSHRVESFLLPPLEVLRPIPAVAW 119

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +       L+    +  +   G  + IL N I G  A        A S   +    
Sbjct: 120 IPLAILMFPSSELS----MIFITFTGALFPILLNTIHGVEAVDKRLIASAKSLGASASAI 175

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +ILPG  P  +TG     G +W   + +E+ S         G+G Y  ES    ++ 
Sbjct: 176 LREVILPGAAPSIITGLTIGMGTSWFCLVTAEMISGQW------GIGYYTWESYVIQNYA 229

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++V+G+L++    +  +  +
Sbjct: 230 DIVVGMLLIGVLGMGSSLLV 249



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + D     +    L  +   +  R+ +    + L       L  +S R+   L+P
Sbjct: 47  PTPGAVADAAWNLVISSKLLPHLGSSLSRVFAGYFSAALLGIALGLLIGRSHRVESFLLP 106

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ IP + ++   ++ F          +EL+ IF  FT  ++ +  +    +  + 
Sbjct: 107 PLEVLRPIPAVAWIPLAILMF--------PSSELSMIFITFTGALFPILLNTIHGVEAVD 158

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L   ++S   S       + +P + P ++  + + M   WF +V +EMI         
Sbjct: 159 KRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAEMISG------Q 212

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
            GIG Y   +   Q+   I+  ML +  +     L  + L    I W
Sbjct: 213 WGIGYYTWESYVIQNYADIVVGMLLIGVLGMGSSLLVKTLGNLFIPW 259


>gi|329939067|ref|ZP_08288441.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces griseoaurantiacus M045]
 gi|329301952|gb|EGG45845.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces griseoaurantiacus M045]
          Length = 604

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++             + +D  +L   +  T   +L A VI+L+    
Sbjct: 49  LLMAGILAVLAWWLRGLAAGVLTFAGFAL-IDSLALWDRSMSTLSLVLVATVIALVIGVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S+ +  V+ P+LD++Q++P +  L   +++F    P    G     IFAI   
Sbjct: 108 VGIWAARSKTVSSVVRPVLDLLQTMPSMVLLIPAILFFGLGVPA---GVIATLIFAIAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  S       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDAELVEAAEAFGTSPRNTLLRVQLPLALPTIMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G            +  +I + D+     + L ++ +    D++
Sbjct: 220 MVVIAGMVGTGGLGGA-------VNESIGQLDIGLGFESGLGIVILAIYLDRV 265



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 9/180 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++ G+   +AW   G      T+     +  L        T+  V+V  +IA +I +PV
Sbjct: 49  LLMAGILAVLAWWLRGLAAGVLTFAGFALIDSLALWDRSMSTLSLVLVATVIALVIGVPV 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +SS ++P   LL   P+ V     +           +   +  I       
Sbjct: 109 GIWAARSKTVSSVVRPVLDLLQTMPSMVLLIPAILFFGLGVPAGVIATLIFAIA----PG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  +       + LP   P  + G         +  +++
Sbjct: 165 VRMTELGIRQVDAELVEAAEAFGTSPRNTLLRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224


>gi|126730769|ref|ZP_01746579.1| ABC transporter permease protein [Sagittula stellata E-37]
 gi|126708935|gb|EBA07991.1| ABC transporter permease protein [Sagittula stellata E-37]
          Length = 670

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 83/573 (14%), Positives = 180/573 (31%), Gaps = 45/573 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
                L+ +LV G+  + L G +       +V    +   +  L      T   ++ +++
Sbjct: 127 PPLPWLSIILVAGLAGLKLGGWKLA----GLVSAAFLYALLFDLWAPTMLTLSSVIVSVI 182

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  +   +      +   L  +  P+ DIMQ++PI  +L   +  F            + 
Sbjct: 183 VGTIMGTLLGIAVFRQPWLEKIFTPVYDIMQTVPIFAYLVPILYLFG--------FGPVG 234

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A        M   +  +L  +P  + E S     + WQ  W + +P     L+  + 
Sbjct: 235 AMIATVIYATPPMARVVTLALQEVPPSIREASAMAGTTPWQSMWLVLLPSCRAKLLVGIN 294

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             +      V+ + +I          G+G+ +  A++   +   + A   ++ +    D+
Sbjct: 295 QLIMLSLVVVIIASVI-------GADGLGAVVLQALQSLRIGNGVEAGAAIVLLAIALDR 347

Query: 258 L------------LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L            + R +      F +     +       + L    +F  +   S  + 
Sbjct: 348 LGRAAATQVPNRQVARYL--RGPTFGMALLVALAGPALLQVALPWVVSFPDWASLSMASH 405

Query: 306 FSPLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           +  L   + +     L   +       L+      +S         V     I   W+  
Sbjct: 406 WDDLVLAINESWSEELRAFKTATFIWLLKPAKLLALSVPWSGAVIAVGALAYILQGWRLA 465

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
              V    +     +     +T + +   ++ + +I IP+GI     P + + +      
Sbjct: 466 LPCVLMMLFVATSGLWVQAQLTTYLLAASVLPSLLIGIPLGILCVAYPKVDAVMSWVIDT 525

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P  V+   V+  +        + +          Y      A     P    EVA 
Sbjct: 526 VQTLPTFVYIIPVIMFLGSGDFAALIAIVAYSWTPAARY----TAAALRNIPAAVTEVAD 581

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               + W+   ++ LP      +         A+   +++ +         T GL A   
Sbjct: 582 MSGASAWQRLVWVRLPVARSGLILAVNQTIMMAFGVLVITALIG-------TKGLEAEAL 634

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            S  K      ++    M C  +  +R L   L
Sbjct: 635 VSLSKADPGRGIVAGAAMVCLAIIADRLLRASL 667


>gi|29828678|ref|NP_823312.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29605782|dbj|BAC69847.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 303

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 12/261 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--HSLPQYASRTTL 70
           ++I P +  +   ++V   +         + +P        I        L  Y   +  
Sbjct: 47  QKILPPVIAIALVLVVWQALISFKIVTDPSKLPPLSAVWNEIENAWLEGKLLGYIWTSVS 106

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L   + +L+       L A+ R +   + PIL  +QS+P + ++   VV+F       
Sbjct: 107 RGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPPAVVWFGLNNSMM 166

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                      I    V ++   +   +  +P       R+   +G +  W++ +P ++P
Sbjct: 167 YT--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWHVVLPAALP 218

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G V  +    +  W  ++A+E+I          G+G  +       D+  +  A+L +L 
Sbjct: 219 GYVAGLKQGWAFSWRSLMAAEIIA--SFPDLGVGLGQLLENGRNAIDMAMVFEAILLILV 276

Query: 251 VIFLYDQLLFRPMIVWSNKFR 271
           V    D L+F P+  W  + R
Sbjct: 277 VGIAIDLLIFSPLERWVLRSR 297



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++  + A +I  P+G+ +     + + I P  Q L + P+  + P 
Sbjct: 95  GKLLGYIWTSVSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPP 154

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V          N  +  +++ G    I   +++G    P  F     +   TG R   +
Sbjct: 155 AVVWFGL----NNSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWH 210

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 211 VVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNAIDMAMVF 268

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 269 EAILLILVVGIAIDLLIFSPLERWVLR 295


>gi|288932110|ref|YP_003436170.1| binding-protein-dependent transporters inner membrane component
           [Ferroglobus placidus DSM 10642]
 gi|288894358|gb|ADC65895.1| binding-protein-dependent transport systems inner membrane
           component [Ferroglobus placidus DSM 10642]
          Length = 253

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 86/233 (36%), Gaps = 7/233 (3%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L    + +    A  +   +   +V          ++     ++ RV+    +A  + IP
Sbjct: 14  LWYLLYFLNVLPAFHVVVVTFLELVVEAEPVLGKTLLQHAASSLLRVLAGATVAFSLSIP 73

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI + +     + + P  ++L   P   + PL     + +          ++  G  + 
Sbjct: 74  LGILM-WFSRTYNLLHPAIEVLRPIPPLAWIPLSYILFASFPNPTVFAQIFIVAVGAFFP 132

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
               +       P +F E+A  F    +     I+LP   P  +TG     G  W + I 
Sbjct: 133 SFVTISDYVRGIPQEFIELAKVFGARNFDLLTKIVLPYSLPGIITGIRVGLGVGWMSIIA 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEK-GSFPEVVLGVLIMCCFVLALNRFLWH 575
           +E+ +        +GLG +I    E  G  PE++ G+ ++      +N  L+ 
Sbjct: 193 AEMIASSG-----SGLGYFILVMYEVGGRMPEILAGMAMIGLIGYLMNTLLFK 240



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 105/217 (48%), Gaps = 11/217 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A+ + LR+L+   ++   +     L   SR    +L P +++++ IP L ++  
Sbjct: 47  KTLLQHAASSLLRVLAGATVAFSLSIPLGILMWFSRTYN-LLHPAIEVLRPIPPLAWIPL 105

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           + + F   +P   +    A IF +     +    ++   +  IP++  E+++ F    + 
Sbjct: 106 SYILF-ASFPNPTVF---AQIFIVAVGAFFPSFVTISDYVRGIPQEFIELAKVFGARNFD 161

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P+S+PG++  + + +  GW  ++A+EMI    +     G+G +I +  +    
Sbjct: 162 LLTKIVLPYSLPGIITGIRVGLGVGWMSIIAAEMIASSGS-----GLGYFILVMYEVGGR 216

Query: 239 LAILYAMLTMLGVI-FLYDQLLFRPMIVWSNKFRLER 274
           +  + A + M+G+I +L + LLF+    +  + + E 
Sbjct: 217 MPEILAGMAMIGLIGYLMNTLLFKLEERFPWRLKSET 253


>gi|163790850|ref|ZP_02185275.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7]
 gi|159873918|gb|EDP67997.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7]
          Length = 283

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F+L++ +I  +    +       IV +  I      L      T   +L A ++S++ 
Sbjct: 58  LLFILIVAVIAFIASRKKFGLAAFSIVGLWFIY--NQGLWSDLMNTLTLVLVASLLSVII 115

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
              +  L AK++    ++ P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 116 GVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASLIFAI 172

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  +  +L E + SF  +G QK + + +P +   ++  +  ++  
Sbjct: 173 PPTVRF-----TNLGIRQVSDELVEAAESFGSTGAQKLFKVELPLAKSTIMAGINQTVML 227

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  +++   +     + L ++ +  + D+L
Sbjct: 228 ALSMVVIASMI-------GAPGLGREVLSSLQRAQVGTGFVSGLGLVVLAIIIDRL 276



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +L I    V+  +A    +    + +    +     +      T+  V+V  +++ I
Sbjct: 55  VPPLLFILIVAVIAFIASRKKFGLAAFSIVGLWFIYNQGLWSDLMNTLTLVLVASLLSVI 114

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P GI +      ++ I P    +   PA V+    V+      +       +  I  
Sbjct: 115 IGVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASLIFAIPP 174

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T  +       G     ++  E A SF  TG +    + LP      + G       A +
Sbjct: 175 TVRF----TNLGIRQVSDELVEAAESFGSTGAQKLFKVELPLAKSTIMAGINQTVMLALS 230

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +  S ++       +  L +    + ++R 
Sbjct: 231 MVVIASMIG-------APGLGREVLSSLQRAQVGTGFVSGLGLVVLAIIIDRL 276


>gi|60682640|ref|YP_212784.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis NCTC 9343]
 gi|60494074|emb|CAH08866.1| putative glycine betaine transport system permease protein
           [Bacteroides fragilis NCTC 9343]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      + I  ++L    +      +  ++ + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   V+ PILD+MQ++P   +L   V++F            +  +F
Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +     + +AW   G  V  FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W          I P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|255015584|ref|ZP_05287710.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_7]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LL     I I  +    + ++     I  ++ ++L       +   +T   +LS+  ++L
Sbjct: 41  LLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLVYGMGFWEETMQTLALVLSSTGMAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S     +L P+LD MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 MLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       L  +P+++EE +RSF  +  Q  + + +P ++P ++  +  ++
Sbjct: 158 A-----LPPVARLTALGLRQVPKNVEEAARSFGATPVQLLFKVELPLALPTILAGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVVAAMISAG-------GLGEVVLKGITQMKIGMGFEGGIAVVILAIVLDRI 263



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    F +   +   +A    G     FT   +  V  +G       T+  V+    +A
Sbjct: 40  VLLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLVYGMGFWEETMQTLALVLSSTGMA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ IP+GIW+    H +  +QP    +   PA V+    V       +       +   
Sbjct: 100 LMLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +      G    P + +E A SF  T  +    + LP   P  + G       +
Sbjct: 158 --ALPPVARLTALGLRQVPKNVEEAARSFGATPVQLLFKVELPLALPTILAGVNQTIMMS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVVAAMISAG-------GLGEVVLKGITQMKIGMGFEGGIAVVILAIVLDRI 263


>gi|239625201|ref|ZP_04668232.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519431|gb|EEQ59297.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 263

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +I     ++   +    + ++I IP+GI + +       I+P   LL   P   +
Sbjct: 60  PDGATLITHTLQSLKVALTGYAMGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAW 119

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +       L      +L++   +    + N   G     +    V   F  +  + 
Sbjct: 120 IPLFILLFGIGLL----PKALVIFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASDMQK 175

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +P   P   TG   A G AW A + +E+ +       + GLG  I ++       
Sbjct: 176 LFKIAIPTATPMIFTGLRVALGSAWTALVAAELLA------SSNGLGYMIQQARSISRPD 229

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V++G++ +    LA++R L
Sbjct: 230 LVLVGMITIGIVGLAMDRLL 249



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L  +  ++    L+   +  +       L A +R   M + P+ D+++ IP L ++
Sbjct: 61  DGATLITHTLQSLKVALTGYAMGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAWI 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F      K +         IF + +     + Y  +         V   F  S 
Sbjct: 121 PLFILLFGIGLLPKAL--------VIFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASD 172

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            QK + + +P + P +   + +++   W  +VA+E++   +      G+G  I  A    
Sbjct: 173 MQKLFKIAIPTATPMIFTGLRVALGSAWTALVAAELLASSN------GLGYMIQQARSIS 226

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               +L  M+T+  V    D+LL
Sbjct: 227 RPDLVLVGMITIGIVGLAMDRLL 249


>gi|220920372|ref|YP_002495673.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219944978|gb|ACL55370.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 257

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 98/244 (40%), Gaps = 17/244 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-------GCITMFR 389
            + V  +     F +   VA    +  + ++ +  T     +++           +T++R
Sbjct: 11  PRAVLGVGFFVLFVLAWAVATLGGFVPVTFLADPLTMLQDGWLLLTRFGFLSDIGVTVWR 70

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV   ++A+++ +P+GI +G    + +  +PF       PA+ F PL++       +   
Sbjct: 71  VVGGFLLAAVVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIGEMQK- 129

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               L++  G+ + I+  V         D  E A +   +     R +++P   P     
Sbjct: 130 ---LLVIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATAPDIAEI 186

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G AW   IV+E+         ++G+G  I ES    +  +++ G++++    LA 
Sbjct: 187 LRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIGLIGLAS 240

Query: 570 NRFL 573
           +   
Sbjct: 241 DFLF 244



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 83/239 (34%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + FVL   +  +     +     P  ++    + L           T  R++   +++ 
Sbjct: 20  FVLFVLAWAVATLGGFVPVTFLADPLTMLQDGWLLLTRFGFLSDIGVTVWRVVGGFLLAA 79

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L    + +     P +   + +P   F+   +++            E+  + 
Sbjct: 80  VVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIG--------EMQKLL 131

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +   +  S+  + RDL E + +   S       + +P + P +   + + +
Sbjct: 132 VIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATAPDIAEILRLVL 191

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W +V+ +E+I          GIG  I  +        I++ ++ +  +    D L 
Sbjct: 192 GWAWTYVIVAELIGSSS------GIGHMIIESQALLATGQIIFGIIVIGLIGLASDFLF 244


>gi|295085035|emb|CBK66558.1| ABC-type proline/glycine betaine transport system, permease
           component [Bacteroides xylanisolvens XB1A]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ +      +      I   + + L       +   +T   + S+  ++L
Sbjct: 41  LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V     +
Sbjct: 39  HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|225420037|ref|ZP_03762340.1| hypothetical protein CLOSTASPAR_06380 [Clostridium asparagiforme
           DSM 15981]
 gi|225041293|gb|EEG51539.1| hypothetical protein CLOSTASPAR_06380 [Clostridium asparagiforme
           DSM 15981]
          Length = 262

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++   ++   I +++ +P+GI + +       ++P   L+   P   +
Sbjct: 59  PDGATLGQHLLESLKVCLMGYSIGALLGVPLGIAMAWNKWCDWLVRPVFDLIRPVPGLAW 118

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +              ++++   +    + N   G          V   F  + W+ 
Sbjct: 119 TPMFILIFGIG----IEAKAMVIFVNSFVACIVNTYTGIRQTDQLHLWVGDVFGASQWQK 174

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +P   P   TG  TA GG+W A + +E+ +       + GLG  I ++       
Sbjct: 175 LVKIAIPTATPMIFTGLRTALGGSWMALVAAEMLA------ASKGLGFMIQQARYISRPD 228

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V++G+L++    LAL+  L
Sbjct: 229 LVIVGMLMIGVVGLALDAIL 248



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L Q+   +    L    I  L         A ++    ++ P+ D+++ +P L + 
Sbjct: 60  DGATLGQHLLESLKVCLMGYSIGALLGVPLGIAMAWNKWCDWLVRPVFDLIRPVPGLAWT 119

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F      K +         IF +       + Y  +    +    V   F  S 
Sbjct: 120 PMFILIFGIGIEAKAM--------VIFVNSFVACIVNTYTGIRQTDQLHLWVGDVFGASQ 171

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQK   + +P + P +   +  ++ G W  +VA+EM+          G+G  I  A    
Sbjct: 172 WQKLVKIAIPTATPMIFTGLRTALGGSWMALVAAEMLAASK------GLGFMIQQARYIS 225

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               ++  ML +  V    D +L
Sbjct: 226 RPDLVIVGMLMIGVVGLALDAIL 248


>gi|16077950|ref|NP_388765.1| aliphatic sulfonate ABC transporter permease [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|732410|sp|P40401|SSUC_BACSU RecName: Full=Putative aliphatic sulfonates transport permease
           protein ssuC
 gi|438473|gb|AAA64349.1| protein is hydrophobic, with homology to E. coli ProW; putative
           [Bacillus subtilis]
 gi|1903040|emb|CAB07522.1| hypothetical 30.2 kd protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2633208|emb|CAB12713.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 276

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 97/277 (35%), Gaps = 16/277 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L +T        P           +   + I  + V+ G+ +  A      +  
Sbjct: 4   AEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTI 63

Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             T++++     +     I+++R  +  ++ + + + +GI  GF       + P  Q+L 
Sbjct: 64  VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 123

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +    +      +   LL+  G  + +  N   G         EVA   
Sbjct: 124 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 179

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                +    +ILP   P  + G   + G AW   +V+E+         ++G+G  I ++
Sbjct: 180 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSSGVGYMIMDA 233

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +     +V  G++I        +   R L   L  +
Sbjct: 234 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 270



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              + +  +I  L +        P  IV      +    L  +   +  R     ++   
Sbjct: 37  AVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  S+R  + L P L +++++P L      +++F      K++   L A F 
Sbjct: 97  LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L EV+R       Q+   + +P ++P ++  + +S+ 
Sbjct: 157 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          G+G  I  A +      +   ++    V  L D   +L
Sbjct: 209 IAWLGLVVAELMGSSS------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 262

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 263 LERKLLKWRNSYE 275


>gi|294677765|ref|YP_003578380.1| taurine ABC transporter permease TauC [Rhodobacter capsulatus SB
           1003]
 gi|294476585|gb|ADE85973.1| taurine ABC transporter, permease protein TauC [Rhodobacter
           capsulatus SB 1003]
          Length = 417

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRV+      ++I IP+G  +G    +     P  + +   P     PL++     
Sbjct: 222 GFSLFRVLAGFFFGALIGIPLGYAMGLSGWVRGWFDPIVEFMRPVPPLALIPLIIIWWGI 281

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +         +L+     W ++    +G +         A S   + W+   ++I+P   
Sbjct: 282 WETGK----IVLLFLAALWIMVIAARSGVAGVRLSKVHAAYSLGASKWQVLTHVIIPNSL 337

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    GA  A G  W   + +E+ +         G G  I  +++      VV+G+L++ 
Sbjct: 338 PDLFIGARVAMGVCWGTVVAAELVAAEK------GAGMMILVASKFQLTDIVVMGILLIG 391

Query: 564 CFVLALNRFL 573
                ++  L
Sbjct: 392 LIGYGIDVAL 401



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+L+      L           S  +     PI++ M+ +P L  +   +
Sbjct: 217 LWEHLGFSLFRVLAGFFFGALIGIPLGYAMGLSGWVRGWFDPIVEFMRPVPPLALIPLII 276

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +++     GK        I  +F + +W M  +    +  +       + S   S WQ  
Sbjct: 277 IWWGIWETGK--------IVLLFLAALWIMVIAARSGVAGVRLSKVHAAYSLGASKWQVL 328

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+P L     ++M   W  VVA+E++          G G  I +A K Q    
Sbjct: 329 THVIIPNSLPDLFIGARVAMGVCWGTVVAAELVA------AEKGAGMMILVASKFQLTDI 382

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           ++  +L +  + +  D  L    R  + W  +
Sbjct: 383 VVMGILLIGLIGYGIDVALRAAERHFVPWRGR 414


>gi|237713750|ref|ZP_04544231.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409343|ref|ZP_06085886.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22]
 gi|294805993|ref|ZP_06764860.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446197|gb|EEO51988.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262352795|gb|EEZ01892.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22]
 gi|294446875|gb|EFG15475.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 274

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ +      +      I   + + L       +   +T   + S+  ++L
Sbjct: 41  LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   V   +AW   G     FT   +L +  +G       T+  V     +
Sbjct: 39  HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|54024412|ref|YP_118654.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
 gi|54015920|dbj|BAD57290.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
          Length = 281

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 100/291 (34%), Gaps = 14/291 (4%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
            S+    +  ++ V +  R        +    +++ S      +  +     V       
Sbjct: 1   MSTVALTAAPADTVAEPVRDTPAGASRWRSRLIRVVSVAAAIALWQLLTVNDVRAGLRFD 60

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           A  ++  IV  F         +L    ++ R+     +A+++ +  GI +G    +    
Sbjct: 61  ALPTVTEIVAEFGEHLGRQEYYLDIGQSLIRIGTGFGLAAVVGVLAGIGLGRSGLLGDVF 120

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  +L+   PA    P+ +        +    +  +    + + +L +      A P  
Sbjct: 121 GPLTELVRPIPAIALVPVAILLFP----SDESGIVFITFTASLFPVLVSTRHAVRALPTI 176

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +++   +   T       ++ PGI P   +G     G AW   I +E+ S         G
Sbjct: 177 WEDAVRTLGATRTDVLVRVVFPGILPGVFSGLSVGMGVAWICLISAEMISGRL------G 230

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYLYGTRCLR 586
           LG    +S     +P V +G++ +     A +  +      L  +  R +R
Sbjct: 231 LGYRTWQSYTIVDYPAVFVGMITIGVLGFATSGLVELAGRRLTRWLPREVR 281



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 83/207 (40%), Gaps = 17/207 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            ++ +R+ +   ++ +   +      +S  LG V  P+ ++++ IP +  +   ++ F  
Sbjct: 86  GQSLIRIGTGFGLAAVVGVLAGIGLGRSGLLGDVFGPLTELVRPIPAIALVPVAILLF-- 143

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E   +F  FT+ ++ +  S   ++  +P   E+  R+   +       +  
Sbjct: 144 ------PSDESGIVFITFTASLFPVLVSTRHAVRALPTIWEDAVRTLGATRTDVLVRVVF 197

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +PG+   + + M   W  ++++EMI          G+G     +    D  A+   M
Sbjct: 198 PGILPGVFSGLSVGMGVAWICLISAEMISG------RLGLGYRTWQSYTIVDYPAVFVGM 251

Query: 246 LTMLGVIFLYDQLL---FRPMIVWSNK 269
           +T+  + F    L+    R +  W  +
Sbjct: 252 ITIGVLGFATSGLVELAGRRLTRWLPR 278


>gi|255327602|ref|ZP_05368668.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rothia mucilaginosa ATCC 25296]
 gi|255295276|gb|EET74627.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rothia mucilaginosa ATCC 25296]
          Length = 280

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 10/209 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +           +     I+  RV++   I +++ + +G  IG    +     P    
Sbjct: 68  RVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGA 127

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L A P+  + PL++  +     +       L+  G  + +   V A  +       E A 
Sbjct: 128 LRAVPSLAWVPLLLLWIGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDPKLVEAAR 183

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F + G R +  + LP + P  V+G   A   AW   + +E+         + GLG  + 
Sbjct: 184 AFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLT 237

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +S   G    ++L ++ +       +  +
Sbjct: 238 DSQNNGRTDRLLLAIVALAVLGKITDALV 266



 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 14/219 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  +V           L ++ + +T R+L    I  +   V   L   S  + ++ 
Sbjct: 62  QLPSPDRVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIA 121

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +  ++++P L ++   +++       KV    + A F ++T+        +  +L +
Sbjct: 122 APTIGALRAVPSLAWVPLLLLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAH 173

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L E +R+F L G + F  + +P  +P +V  + ++++  W F+VA+E++       
Sbjct: 174 VDPKLVEAARAFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLGAS---- 229

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              G+G  +  +        +L A++ +  +  + D L+
Sbjct: 230 --MGLGYLLTDSQNNGRTDRLLLAIVALAVLGKITDALV 266


>gi|49083280|gb|AAT50991.1| PA5095 [synthetic construct]
          Length = 284

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +P  ++  +   +    L     +T   ML A  IS+L     
Sbjct: 54  LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   IAW +   ++       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V   I+ +I IP+GI       + + + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G     ++  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +  + +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|206560925|ref|YP_002231690.1| putative transmembrane protein of ABC transporter [Burkholderia
           cenocepacia J2315]
 gi|198036967|emb|CAR52882.1| putative transmembrane component of ABC transporter [Burkholderia
           cenocepacia J2315]
          Length = 275

 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 91/250 (36%), Gaps = 10/250 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                H    +L +        +       +    ++G  +     +V+  +     +++
Sbjct: 21  ARSPAHAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSALVSLRSLCADDHLL 80

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +++ R+ V +  A +  +P+G+ +G    +   + P  Q L       + PL V  
Sbjct: 81  EHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLAVMS 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                      +  L+ F   W +L +  AG       + ++ +S   T      +I+LP
Sbjct: 141 FGIGDR----AIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRRELLVHIVLP 196

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            I    + G   A G  W   + +E+           GLG  I ++ ++ ++ E+   ++
Sbjct: 197 AIAGPLLNGTRLAIGILWIVLVPAEMLG------VNAGLGYLILDTRDRLAYAELTAVIV 250

Query: 561 IMCCFVLALN 570
           ++      L+
Sbjct: 251 VIGALGFVLD 260



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 17/209 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++A  +  R+   +  +LL       L  + + +  +L P    ++ +  L ++   
Sbjct: 78  HLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLA 137

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F           + A  F +  + +W +  S    +  I R   ++  S   +  + 
Sbjct: 138 VMSFGIG--------DRAIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRREL 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ +P     L+    +++   W  +V +EM+ V        G+G  I          
Sbjct: 190 LVHIVLPAIAGPLLNGTRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYA 243

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIV 265
            +   ++ +  + F+ D   +LL R ++ 
Sbjct: 244 ELTAVIVVIGALGFVLDGITRLLARALLA 272


>gi|107104191|ref|ZP_01368109.1| hypothetical protein PaerPA_01005264 [Pseudomonas aeruginosa PACS2]
 gi|116053242|ref|YP_793565.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894194|ref|YP_002443063.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238198|ref|ZP_04931521.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719]
 gi|254244024|ref|ZP_04937346.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192]
 gi|296391943|ref|ZP_06881418.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313110133|ref|ZP_07796035.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa 39016]
 gi|115588463|gb|ABJ14478.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170129|gb|EAZ55640.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719]
 gi|126197402|gb|EAZ61465.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192]
 gi|218774422|emb|CAW30239.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310882537|gb|EFQ41131.1| putative amino acid transporter permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 283

 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +P  ++  +   +    L     +T   ML A  IS+L     
Sbjct: 54  LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   IAW +   ++       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V   I+ +I IP+GI       + + + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G     ++  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +  + +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|197118119|ref|YP_002138546.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197087479|gb|ACH38750.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 252

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             ++      D   +     I++ R     ++A +  IP+G+++G        I P  Q+
Sbjct: 39  DVVLAIKELSDNGVLWTNIGISLARFAAAYLMAVVAGIPLGLFLGRFTRCHRAIDPLIQV 98

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       +FPL V          N     ++     + +L   I+     P  + +V++
Sbjct: 99  LRPISPIAWFPLAVLWFGIG----NAPAVFIIFLAAFYPVLLTTISAVRGVPAVYLKVST 154

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F    +  +  +I+P  FP  + G   A G  W   +  E+          +GLG  I 
Sbjct: 155 NFGAGAFLTFVRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIV 208

Query: 545 ESTEKGSFPEVVL 557
           ++       +V+ 
Sbjct: 209 DARNFLRTDQVMA 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 91/226 (40%), Gaps = 15/226 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +  ++AFVL+   I    +  ++   P D+V  +    D   L      +  R  +A +
Sbjct: 11  PLLTVVAFVLIWQ-IAARRYPPEQFPAPSDVVLAIKELSDNGVLWTNIGISLARFAAAYL 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++          +  R    + P++ +++ I  + +    V++F              
Sbjct: 70  MAVVAGIPLGLFLGRFTRCHRAIDPLIQVLRPISPIAWFPLAVLWFGIG--------NAP 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F IF +  + +  +   ++  +P    +VS +F    +  F  + VP + PG++  + 
Sbjct: 122 AVFIIFLAAFYPVLLTTISAVRGVPAVYLKVSTNFGAGAFLTFVRVIVPAAFPGIMVGLH 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +++  GW  +VA EM+          G+G  I  A        ++ 
Sbjct: 182 IAVGTGWIHLVAGEMLG------AQSGLGFMIVDARNFLRTDQVMA 221


>gi|254252109|ref|ZP_04945427.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124894718|gb|EAY68598.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 291

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 10/234 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +   + W   +  V               +T      +      ++ RV+     A++  
Sbjct: 52  WQAAVHWRLSLGVVTFANVPAPADVGPALWTLLHSPKLPMHLFASVTRVLAGFAAAALAG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ IG    +   + P  ++L   PA  + PL +       L+    +  +   G  
Sbjct: 112 VGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N + GA A        A S    G+  +  +ILPG  P   TG     G AW   
Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCL 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +E+ +  +      G+G +   S    ++P++V+G+ ++    +  +  +  
Sbjct: 228 VTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+    + L          
Sbjct: 60  LSLGVVTFANVPAPADVGPALWTLLHSPKLPMHLFASVTRVLAGFAAAALAGVGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|186471608|ref|YP_001862926.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197917|gb|ACC75880.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 294

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L A   V  ++ ++   +    V   I V +  + +    L      T   +++A V S
Sbjct: 42  GLAAVPFVAMLVFLVAFALWRRGVVFSIFVGLALLAIHYMGLWAQTVSTLALVIAATVFS 101

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A+++R+ MVL  +LD MQ++P   +L   V+ F            + A+
Sbjct: 102 LVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +  +       +  +  +L E  RSF  +  Q  W + +P ++P ++  +  +
Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELLEAGRSFGSTDAQLLWKVQLPNALPSIMAGVNQT 213

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G Y+   I+  D+       L ++ +  + D+L
Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 77/235 (32%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F  +    +  A    G + + F    +L + ++G       T+  V+   + +
Sbjct: 42  GLAAVPFVAMLVFLVAFALWRRGVVFSIFVGLALLAIHYMGLWAQTVSTLALVIAATVFS 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW      +   ++     +   PA V+    V       +   +   +   
Sbjct: 102 LVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   SF  T  +    + LP   P  + G       A
Sbjct: 160 --AMPPVVRLTTLGIRQVREELLEAGRSFGSTDAQLLWKVQLPNALPSIMAGVNQTIMMA 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ +   G       GLG Y+    ++        G L +    + L+R 
Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265


>gi|271969470|ref|YP_003343666.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270512645|gb|ACZ90923.1| ABC-type transporter, permease protein [Streptosporangium roseum
           DSM 43021]
          Length = 272

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R +    +A ++ IP+G+ IG+   ++  + P  +L     A    P+ V  +   
Sbjct: 81  ASLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALALLPVFVLILGLG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++++   W IL N +AG  +      + A S  +   R ++ +ILP   P
Sbjct: 141 ETSK----ISIILYACAWPILLNTVAGVKSVDPLLIKSARSMGLRPVRLFQKVILPAAVP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    + +E+           GLG  I  +      P++  G+L +  
Sbjct: 197 TIFTGIRLAGAYSILVLVAAEMVG------AKAGLGYLITYAQFNFRVPDMYAGILTISV 250

Query: 565 FVLALNRFLWH 575
             L  N+ L  
Sbjct: 251 LGLLFNQLLVR 261



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 14/206 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   + +R L+   ++++       L    + +  +L P+L++ ++   L  
Sbjct: 70  LLSGELLDHTQASLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALAL 129

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+             E + I  I  +  W +  +    + ++   L + +RS  L 
Sbjct: 130 LPVFVLILGLG--------ETSKISIILYACAWPILLNTVAGVKSVDPLLIKSARSMGLR 181

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P ++P +   + ++ +     +VA+EM+          G+G  I  A   
Sbjct: 182 PVRLFQKVILPAAVPTIFTGIRLAGAYSILVLVAAEMVGAKA------GLGYLITYAQFN 235

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  +   +LT+  +  L++QLL R
Sbjct: 236 FRVPDMYAGILTISVLGLLFNQLLVR 261


>gi|255693778|ref|ZP_05417453.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides finegoldii DSM 17565]
 gi|260620401|gb|EEX43272.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides finegoldii DSM 17565]
          Length = 275

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L      I I+ +      +      I   + + L       +   +T   +LS+  ++L
Sbjct: 41  LFGIPFYITILILAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCLAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A S R   +L P+LD+MQ++P   +L   V++F     G V G     IF
Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 84/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           ++L    F +   +   +AW   G     FT   +L +  +G       T+  V+    +
Sbjct: 39  HILFGIPFYITILILAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCL 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A I+ +P+G+W    P     ++P   L+   PA V+    V       +       +  
Sbjct: 99  ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++     G    P +  E + SF  T W+    + LP   P  +TG       
Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|325519241|gb|EGC98695.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 95

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 63/95 (66%), Positives = 73/95 (76%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ILFNVIAGA ++PND+KE   +F I GW+WWR  ILPGIFPYYVTGAITA GGAWNASIV
Sbjct: 1   ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           SE   WG   +   GLGAYIA+ T  G FP+++LG
Sbjct: 61  SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 45/95 (47%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           + F++     + P D +E +++FR+ GWQ +    +P   P  V   + +  G W   + 
Sbjct: 1   ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           SE +  GDT +   G+G+YIA      D   I+  
Sbjct: 61  SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95


>gi|238763748|ref|ZP_04624707.1| Taurine ABC transporter, permease protein [Yersinia kristensenii
           ATCC 33638]
 gi|238698050|gb|EEP90808.1| Taurine ABC transporter, permease protein [Yersinia kristensenii
           ATCC 33638]
          Length = 287

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 94/275 (34%), Gaps = 27/275 (9%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           I    P    +     +  ++       VV       A Q I  +      Q +  ++ +
Sbjct: 18  ITHPTPRKITRRSLATKGFWLSIATLVSVVALWWAVTALQLISPLFLPAPQQVLHQLLVI 77

Query: 383 G--------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                            ++ R+++ ++ A  + +P GI +G    +   + P  ++    
Sbjct: 78  ASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPV 137

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PL+V        +      LL+       I    +AG  +        A +   
Sbjct: 138 PPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGA 193

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W+   ++ILP   P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 194 SRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 247

Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
             +   V+ G+ ++      +    R +   L  +
Sbjct: 248 FLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 282



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V  + +I+ L     +  + + +V   P      +L Q+ + +  R+L A++ ++ 
Sbjct: 49  LWWAVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVA 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  VL P+++I + +P L +L   V++F           E + I  
Sbjct: 109 LGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++  + + + 
Sbjct: 161 IYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLG 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
            GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   L  + 
Sbjct: 221 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 274

Query: 259 LFRPMIVW 266
           + R +  W
Sbjct: 275 IQRRLTPW 282


>gi|167031273|ref|YP_001666504.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857761|gb|ABY96168.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 279

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 96/278 (34%), Gaps = 15/278 (5%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC-GVAIGIAWQSIGY 366
           P++       R    +R      ++   +   +     +         + +      +  
Sbjct: 7   PVAGKHDTQARPAAKLRRPLSTRWISTLTLTSLLLAWWLVTAAGWIEPLFLPSPGDILAR 66

Query: 367 IVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                T   +   +W     ++ R+ + ++ A++  IPVGI IG+       + P  +  
Sbjct: 67  AWTLLTQGYMDASLWQHLGASLGRIGLALLAATLTAIPVGIAIGYNRVARGILDPLIEFY 126

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PL+V       L+      LL+       I      G           A S
Sbjct: 127 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 182

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T  +  R++ILP   P  +TG     G  W+  + +E+ +       T+GLG  +  
Sbjct: 183 LGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 236

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           + +      VVLG+L++     AL    R L   L  +
Sbjct: 237 AAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+   +  R+  A++ + L           +R    +L P+++  + IP L +L  
Sbjct: 78  ASLWQHLGASLGRIGLALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   +  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 275


>gi|194292746|ref|YP_002008653.1| aliphatic sulphonate ABC transporter, permease protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226650|emb|CAQ72601.1| putative aliphatic sulphonate ABC transporter, permease protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 281

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            QL S+QR    L  F         +  AWQ +              ++     +++RV 
Sbjct: 42  WQLASSQRAHLGLVTFANVPAPSDVVPAAWQLL----------QSPKLVLHLGNSLYRVF 91

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
                A+   I +G+ IG    +   + P  ++L   P   + PL +       L+    
Sbjct: 92  AGFGAAAAAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELS---- 147

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  +   G  + IL N I G           A S     W  +  ++LP   P  VTG  
Sbjct: 148 MIFITFIGALFPILLNTIHGVERTDPRLIATARSLGARRWTVFPEVLLPAALPSIVTGLA 207

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G +W   + +E+ +  +      G+G Y  E+    ++ ++V+G+L++  F +  + 
Sbjct: 208 IGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSA 261

Query: 572 FLWH 575
            +  
Sbjct: 262 LIKR 265



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+V      L    L  +   +  R+ +    +     V      +SR L  +L+P
Sbjct: 61  PAPSDVVPAAWQLLQSPKLVLHLGNSLYRVFAGFGAAAAAGIVLGMAIGRSRWLEDLLLP 120

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ IP + ++   ++ F          +EL+ IF  F   ++ +  +    +    
Sbjct: 121 PLEVLRPIPGVAWIPLAILMF--------PSSELSMIFITFIGALFPILLNTIHGVERTD 172

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   +RS     W  F  + +P ++P +V  + + M   WF +V +EMI         
Sbjct: 173 PRLIATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAG------Q 226

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG Y   A   Q+   I+  ML +         L+ R
Sbjct: 227 YGIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSALIKR 265


>gi|118472106|ref|YP_888794.1| binding-protein-dependent transporters inner membrane component
           [Mycobacterium smegmatis str. MC2 155]
 gi|118173393|gb|ABK74289.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium smegmatis str. MC2 155]
          Length = 265

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 20/256 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377
            + P    ++   +R +  +      +    +          ++     Q V+       
Sbjct: 7   RNGPTTAGEVSWQRRCAPPITAILIAIALWWSATSVLSGPESVLRQTAPQHVVPALSGLL 66

Query: 378 ---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++    ++++R+ + + +A++I +P+G+ IG          P    L       + 
Sbjct: 67  ERQVLLGDLGVSLWRLSIGLAVATVIGMPLGLLIGSSRIAERAGGPIIAFLRMISPLSWT 126

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ ++         N  +  L+     W +L N  AG  A       VA SFH T W   
Sbjct: 127 PIALAVFGIG----NQPVVFLVAVAAVWPVLLNTAAGVRAVDPGLLNVARSFHATRWEMM 182

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +ILP I  +  TG   A G AW   + +E+          +GLG  I  + ++ ++ +
Sbjct: 183 LAVILPAIRTHVQTGIRLALGVAWIVLVPAEMLG------VRSGLGYQILNARDQLAYDQ 236

Query: 555 VVLGVLIMCCFVLALN 570
           VV  ++++      L+
Sbjct: 237 VVAVIVVIGILGFLLD 252



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 90/248 (36%), Gaps = 17/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHG---IQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           RR  P I  +L  + +      +L G   +   T P+ +V  +   L+   L      + 
Sbjct: 20  RRCAPPITAILIAIALWWSATSVLSGPESVLRQTAPQHVVPALSGLLERQVLLGDLGVSL 79

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+   + ++ +       L   SR       PI+  ++ I  L +    +  F      
Sbjct: 80  WRLSIGLAVATVIGMPLGLLIGSSRIAERAGGPIIAFLRMISPLSWTPIALAVFGIGNQP 139

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            V    +A         VW +  +    +  +   L  V+RSF  + W+    + +P   
Sbjct: 140 VVFLVAVA--------AVWPVLLNTAAGVRAVDPGLLNVARSFHATRWEMMLAVILPAIR 191

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             +   + +++   W  +V +EM+ V        G+G  I  A  +     ++  ++ + 
Sbjct: 192 THVQTGIRLALGVAWIVLVPAEMLGV------RSGLGYQILNARDQLAYDQVVAVIVVIG 245

Query: 250 GVIFLYDQ 257
            + FL D 
Sbjct: 246 ILGFLLDT 253


>gi|298290858|ref|YP_003692797.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927369|gb|ADH88178.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 301

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 23/279 (8%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R     +         L +   +       +  +  GV    A  ++           
Sbjct: 30  PERQSAAPQARKTGRRFALPARVWIPLATLAGFLALWWGVTAYGAVPALFLPSPQAVATR 89

Query: 376 VLYVIWLGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +  ++  G +          ++FRV   +  A +I +P G  IG        + P  + L
Sbjct: 90  LWRLVTEGFVDATLAQHLAASLFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFL 149

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + PLV+               L++       I+    AG      +   VA +
Sbjct: 150 RPIPPLAYLPLVIIWAGIG----ESAKVLVIALAMLPPIIIATAAGTRGVDGNRLNVARA 205

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T  +  R ++LP   P  +TG   A G  W+  + +E+ +       T G+G  I  
Sbjct: 206 LGATRAQLLRLVVLPSASPSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQS 259

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
           +    +   VV G+ ++     A     R +      + 
Sbjct: 260 AANFLATDVVVAGIFLIAAVAFAFECAVRLIERTFVGWA 298



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 101/264 (38%), Gaps = 22/264 (8%)

Query: 14  RIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVD----IVPITLDVHSLPQYASRT 68
           R++  +  L  F+ +  G+             P+ +      +V       +L Q+ + +
Sbjct: 51  RVWIPLATLAGFLALWWGVTAYGAVPALFLPSPQAVATRLWRLVTEGFVDATLAQHLAAS 110

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+ +A+  +L+           S     +L PI++ ++ IP L +L   +++      
Sbjct: 111 LFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFLRPIPPLAYLPLVIIWAGIG-- 168

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E A +  I  + +  +  +       +  +   V+R+   +  Q    + +P +
Sbjct: 169 ------ESAKVLVIALAMLPPIIIATAAGTRGVDGNRLNVARALGATRAQLLRLVVLPSA 222

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++    +++  GW  +VA+E++          G+G  I  A        ++  +  +
Sbjct: 223 SPSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQSAANFLATDVVVAGIFLI 276

Query: 249 LGVIFLY---DQLLFRPMIVWSNK 269
             V F +    +L+ R  + W+ K
Sbjct: 277 AAVAFAFECAVRLIERTFVGWAGK 300


>gi|33603283|ref|NP_890843.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577407|emb|CAE34672.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 265

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR +V   I  +  +P G++ G+   + + + P    +   P   F P+ V     
Sbjct: 73  GASLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGL 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       +L++F    Y   +  AGA + P  +   A S  +T  + +  ++ P   
Sbjct: 133 GEMGK----VVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWRVVFPSSI 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG   A   +W   + +E+           GLG  I+++ +    P V +G+ ++ 
Sbjct: 189 PHIFTGLKVAMALSWAVVVAAELVGAQK------GLGFMISDAAQLFQIPVVFIGIALIG 242

Query: 564 CFVLALNRFL 573
              L LN  L
Sbjct: 243 LIGLVLNVML 252



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 93/247 (37%), Gaps = 19/247 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQYASRTTLRM 72
           ++  ++  + +  ++  L             +    +TL         L  +   +  R 
Sbjct: 20  SVASVVGLLAIWTLVTNLGLVGPGYLPSPQAMFAQLVTLVEQGYGGKPLWDHVGASLFRA 79

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I +L    +   +   + +G ++ PI+  ++ IP + F+   V+YF         
Sbjct: 80  LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLG------ 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E+  +  I  +       S      ++P      + S  ++  Q FW +  P S+P +
Sbjct: 134 --EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWRVVFPSSIPHI 191

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++M+  W  VVA+E++          G+G  I+ A +   +  +   +  +  + 
Sbjct: 192 FTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGLIG 245

Query: 253 FLYDQLL 259
            + + +L
Sbjct: 246 LVLNVML 252


>gi|320186469|gb|EFW61197.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella flexneri CDC 796-83]
          Length = 354

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 ALP-----PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F Q+         + +F         +G+   ++  ++           +    +    V
Sbjct: 97  FQQVLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----V 152

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+
Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G 
Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGV 268

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A +  +++ + + G       GLG  +     +       +G + +    + L+
Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321

Query: 571 RF 572
           R 
Sbjct: 322 RL 323


>gi|284990967|ref|YP_003409521.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284064212|gb|ADB75150.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 258

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 23/243 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------WLG-------CIT 386
           ++ +L    F +     +   W  +      F +  +  ++      WLG         +
Sbjct: 1   MTPVLRRVGFALGLPAVLLTLWWVLSADSTDFYFPPLPRILETLVREWLGPRLTDDVLPS 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R+     +A++  + +GI IG    +   ++P  +L  A P  V  P+ +        
Sbjct: 61  LLRLAAGFSVAAVSAVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILVFGI--- 117

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +    +++ FG  W IL N   G  A      + A ++ ITG    R+++LPG  P  
Sbjct: 118 -DDTMKVIVIAFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQI 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   A    ++SE+ +       T GLG  I ++    + PE+  G+L++    
Sbjct: 177 FAGLRQALSLAIILMVISELFA------ATNGLGFAIVQAQRSFAIPEMWAGMLVLGLIG 230

Query: 567 LAL 569
             L
Sbjct: 231 FLL 233



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              + +  +++          +PR +  +V   L    L      + LR+ +   ++ + 
Sbjct: 16  AVLLTLWWVLSADSTDFYFPPLPRILETLVREWLGPR-LTDDVLPSLLRLAAGFSVAAVS 74

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L    R L   L P+L++ ++IP    +   ++ F      KVI         I
Sbjct: 75  AVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILVFGIDDTMKVI--------VI 126

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               VW +  +  + +  +   L++ +R++ ++G  +  +L +P + P +   +  ++S 
Sbjct: 127 AFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQIFAGLRQALSL 186

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               +V SE+    +      G+G  I  A +   +  + +A + +LG+I     L+FR
Sbjct: 187 AIILMVISELFAATN------GLGFAIVQAQRSFAIPEM-WAGMLVLGLIGFLLSLVFR 238


>gi|15600288|ref|NP_253782.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9951390|gb|AAG08480.1|AE004922_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 283

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +P  ++  +   +    L     +T   ML A  IS+L     
Sbjct: 54  LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   IAW +   ++       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V   I+ +I IP+GI       + + + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G     ++  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +  + +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|295695730|ref|YP_003588968.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295411332|gb|ADG05824.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 274

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
             P         + V   +      ++ G   G++              D+L   W    
Sbjct: 14  KHPIRNRMEFLERPVPGWVAPLGILILLGAWQGVSMAGWVSASALPAPSDILRDGWEMVR 73

Query: 384 --------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+  +I +   + +G+ +G      +   P    L   P     P
Sbjct: 74  GGELWPELYASLVRIVLGFVIGAAAGVTIGVLLGISRLAEAVGLPVVNSLYPIPKIAILP 133

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +    ++       ++  G  + ++FN  +G         + A SF        R
Sbjct: 134 LIMLWLGIGEISK----VTVIAVGVAFPMIFNTYSGVRNADPLLVKAAVSFGAGRGDLIR 189

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILPG  P  V G   + G +    + +E+ +         G+GA I + +       V
Sbjct: 190 KVILPGALPTIVAGLRISVGTSLLLLVAAEMIA------AEHGIGALILKYSNLMMTTRV 243

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++GV+++    L  NR L
Sbjct: 244 MVGVVVLSILGLLFNRLL 261



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 90/245 (36%), Gaps = 15/245 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +     +L  +     +++           P DI+      +    L      + +R++ 
Sbjct: 31  WVAPLGILILLGAWQGVSMAGWVSASALPAPSDILRDGWEMVRGGELWPELYASLVRIVL 90

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             VI          L   SR    V +P+++ +  IP +  L   +++            
Sbjct: 91  GFVIGAAAGVTIGVLLGISRLAEAVGLPVVNSLYPIPKIAILPLIMLWLGIG-------- 142

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E++ +  I     + M F+ Y  + N    L + + SF          + +P ++P +V 
Sbjct: 143 EISKVTVIAVGVAFPMIFNTYSGVRNADPLLVKAAVSFGAGRGDLIRKVILPGALPTIVA 202

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S+      +VA+EMI          GIG+ I           ++  ++ +  +  L
Sbjct: 203 GLRISVGTSLLLLVAAEMIA------AEHGIGALILKYSNLMMTTRVMVGVVVLSILGLL 256

Query: 255 YDQLL 259
           +++LL
Sbjct: 257 FNRLL 261


>gi|82545240|ref|YP_409187.1| glycine betaine transporter membrane protein [Shigella boydii
           Sb227]
 gi|81246651|gb|ABB67359.1| ProW [Shigella boydii Sb227]
 gi|332092004|gb|EGI97082.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella boydii 3594-74]
          Length = 354

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|328886810|emb|CCA60049.1| ABC-type nitrate or sulfonate or bicarbonate transport system,
           permease component [Streptomyces venezuelae ATCC 10712]
          Length = 333

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 95/274 (34%), Gaps = 19/274 (6%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
            +  +        V+ L R L             L   +    +  +    +     +G 
Sbjct: 63  KAPASTAPRARRLVRALARGLKAAGLRSAALLALLAVWEAAPRLGLVDATFLPPVSVVGE 122

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AW  +              ++     ++ R +    IA  + +P+G+ IG+   +++ + 
Sbjct: 123 AWWELL---------GNGQLVEHTSASLTRSLGGFGIAVAVAVPLGLLIGWYRPVAAVLG 173

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  ++     A    P+ V  +     +       ++++   W IL N I+         
Sbjct: 174 PLLEVFRNTAALALLPVFVLLLGIGETSK----VSIVVYACVWPILLNTISAVGNADPTL 229

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             +  S  ++  R ++ +ILP   P   TG   A   +    + +E+           GL
Sbjct: 230 IRLGRSMDLSTPRLFQKVILPASVPAVFTGIRLAGAVSILVLVAAEMIG------AKAGL 283

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I  S    + P++  G++ +    +A N+ L
Sbjct: 284 GYLINASQFNFAIPQMYAGIITISAIGVAFNQLL 317



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L ++ S +  R L    I++        L    R +  VL P+L++ ++   L  
Sbjct: 128 LGNGQLVEHTSASLTRSLGGFGIAVAVAVPLGLLIGWYRPVAAVLGPLLEVFRNTAALAL 187

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+        KV          +  + VW +  +   ++ N    L  + RS  LS
Sbjct: 188 LPVFVLLLGIGETSKVS--------IVVYACVWPILLNTISAVGNADPTLIRLGRSMDLS 239

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P S+P +   + ++ +     +VA+EMI          G+G  I  +   
Sbjct: 240 TPRLFQKVILPASVPAVFTGIRLAGAVSILVLVAAEMIGAKA------GLGYLINASQFN 293

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +  +   ++T+  +   ++QLL    R + +W
Sbjct: 294 FAIPQMYAGIITISAIGVAFNQLLVTVERRLSLW 327


>gi|326204042|ref|ZP_08193903.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
 gi|325985809|gb|EGD46644.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
          Length = 255

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +M+R  +  ++A+   I +G+ +G+  +  S + P  QL+       +FP +V      
Sbjct: 57  ASMYRFFIGYLLAAFAGITLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLLFGIG 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + + +   F     +L   +         + +VA +F I        IILP  FP
Sbjct: 117 DLPAIIIIFIAAFF----PVLLTTVNAVGKVDQTYIKVAKNFGIGQPHLLTKIILPSAFP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A G AW   +  E+          TGLG  I ++        ++ G+L +  
Sbjct: 173 VIASGLHIALGTAWVFLVAGEMVG------AQTGLGFMIIDARNNLRADLLLAGILSIGL 226

Query: 565 FVLALNRFL 573
             L L+ F+
Sbjct: 227 IGLVLDSFI 235



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 88/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L  G +++          P D+       +   +L      +  R     +++  
Sbjct: 12  TILLLLWQGAVSLGHWNQALLPSPVDVGRGFGELISEGTLFTGVKASMYRFFIGYLLAAF 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +    R     + P++ +++ I  + +  F V+ F           +L AI  
Sbjct: 72  AGITLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLLFGIG--------DLPAIII 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF +  + +  +   ++  + +   +V+++F +        + +P + P +   + +++ 
Sbjct: 124 IFIAAFFPVLLTTVNAVGKVDQTYIKVAKNFGIGQPHLLTKIILPSAFPVIASGLHIALG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W F+VA EM+          G+G  I  A        +L  +L++  +  + D  +
Sbjct: 184 TAWVFLVAGEMVGAQT------GLGFMIIDARNNLRADLLLAGILSIGLIGLVLDSFI 235


>gi|89894101|ref|YP_517588.1| hypothetical protein DSY1355 [Desulfitobacterium hafniense Y51]
 gi|89333549|dbj|BAE83144.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 259

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R +    +   + IP+G+ IG+       + P  Q+    P     P+ V      
Sbjct: 64  ISLMRSLSGFTLGMFVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFVMFFGIG 123

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +     ++++++G  W  L N IAG         + A S  +   R +  ++LP   P
Sbjct: 124 EFSK----TMVILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVVLPASLP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y   G   +   +    I +E+         + GLG  +         PE+   +++M  
Sbjct: 180 YIFAGMRISATVSILILIAAEMMG------ASKGLGYALFFYQSNFKIPEMYAVLIVMAV 233

Query: 565 FVLALNRFL 573
           F + LN  L
Sbjct: 234 FGVTLNYTL 242



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 15/241 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           ++ F+L+  I   L         P   V      L     L ++ S + +R LS   + +
Sbjct: 18  IIVFILIWEICARLEIFNPVFFPPFSKVVKALYGLAASGELWKHCSISLMRSLSGFTLGM 77

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   +    ++  + L P+L + +++P L  L   V++F           E +   
Sbjct: 78  FVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFVMFFGIG--------EFSKTM 129

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I    +W    +    + N+   L + +RS  +   + F  + +P S+P +   M +S 
Sbjct: 130 VILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVVLPASLPYIFAGMRISA 189

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +     ++A+EM+          G+G  +        +  +   ++ M       +  L 
Sbjct: 190 TVSILILIAAEMMGASK------GLGYALFFYQSNFKIPEMYAVLIVMAVFGVTLNYTLE 243

Query: 261 R 261
           +
Sbjct: 244 K 244


>gi|326386847|ref|ZP_08208462.1| taurine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208650|gb|EGD59452.1| taurine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 259

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 15/241 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLYVIWL- 382
           P       S   +  +L ++W     G+   +      Q +G +V+   +  V   +W  
Sbjct: 5   PRGSHAGSSALMLGSLLALWWAVTASGLISPLFLPGPGQILGRVVDLARHGFVGASLWQH 64

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV + ++ A I  IP G+ +G  P +++ + P  +     P   + PL+V    
Sbjct: 65  AAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPLIVIWFG 124

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +       +L+       +     +G      D    A S   +  +    ++ P  
Sbjct: 125 IGEVTK----VILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQIAWLVVFPSA 180

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TG   A G  W+  + +E+ +       T GLG  +  +++      VV G+L++
Sbjct: 181 LPDILTGLRIALGVGWSTLVAAELVA------ATRGLGFMVQSASQMLVTDVVVAGILVI 234

Query: 563 C 563
            
Sbjct: 235 A 235



 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 80/191 (41%), Gaps = 14/191 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL Q+A+ +  R+  AM+ +++             R+   L P+++  + +P L +L  
Sbjct: 59  ASLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPL 118

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E+  +  I+ +    +  +    +  +  D    +RS   S  Q
Sbjct: 119 IVIWFGIG--------EVTKVILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQ 170

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W +  P ++P ++  + +++  GW  +VA+E++          G+G  +  A +    
Sbjct: 171 IAWLVVFPSALPDILTGLRIALGVGWSTLVAAELVA------ATRGLGFMVQSASQMLVT 224

Query: 239 LAILYAMLTML 249
             ++  +L + 
Sbjct: 225 DVVVAGILVIA 235


>gi|298375042|ref|ZP_06984999.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|298267542|gb|EFI09198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
          Length = 274

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LL     I I  +    + ++     I  ++ ++L       +   +T   +LS+  ++L
Sbjct: 41  LLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLIYGMGFWEETMQTLALVLSSTGMAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A S R   +L P+LD MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 LLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       L  +P+++ E +RSF  +  Q  + + +P ++P ++  +  ++
Sbjct: 158 A-----LPPVARLTALGLRQVPKNVVEAARSFGATPSQLLFKVELPLALPTILAGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  + + I +  +       + ++ +  + D++
Sbjct: 213 MMSLSMVVVAAMISAG-------GLGEVVLIGITQMKIGMGFEGGIAVVILAIVLDRI 263



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    F +   +   +A    G     FT   +  +  +G       T+  V+    +A
Sbjct: 40  VLLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLIYGMGFWEETMQTLALVLSSTGMA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ IP+GIW+      +  +QP    +   PA V+    V       +       +   
Sbjct: 100 LLLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +      G    P +  E A SF  T  +    + LP   P  + G       +
Sbjct: 158 --ALPPVARLTALGLRQVPKNVVEAARSFGATPSQLLFKVELPLALPTILAGINQTIMMS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ + S G       GLG  +     +        G + +    + L+R 
Sbjct: 216 LSMVVVAAMISAG-------GLGEVVLIGITQMKIGMGFEGGIAVVILAIVLDRI 263


>gi|84501939|ref|ZP_01000097.1| taurine ABC transporter, permease protein [Oceanicola batsensis
           HTCC2597]
 gi|84389934|gb|EAQ02568.1| taurine ABC transporter, permease protein [Oceanicola batsensis
           HTCC2597]
          Length = 264

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 80/249 (32%), Gaps = 10/249 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                      +   +S+   I  + +     +         +           +     
Sbjct: 12  APRRRWSPNNFTWAALSFAGGIGLWWLATVGGLSELPSPWAVLTRMIELALDGQLWEDTF 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV++  ++ S+I +P G  +G+     + I P+ Q     P     PL +  +   
Sbjct: 72  ASLRRVMIGFVLGSVIAVPTGFLMGWYRVARAVIDPWVQFFRVIPPLAIIPLAIVTMGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++        + +   G  +    +   A          +  +I+P   P
Sbjct: 131 ---DETPKIFVIFLAAFLSAVVSTYQGVVSVDKTYINAARVLGANDRVIFTQVIIPASTP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + + G     G AW   + +E+ +        +GLG  + ++      P + + ++ +  
Sbjct: 188 FILVGFRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVAIGI 241

Query: 565 FVLALNRFL 573
             L ++R +
Sbjct: 242 LGLIMDRIV 250



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLH---GIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            RR  PN F   A     GI    L    G+ E   P  ++  +        L +    +
Sbjct: 14  RRRWSPNNFTWAALSFAGGIGLWWLATVGGLSELPSPWAVLTRMIELALDGQLWEDTFAS 73

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R++   V+  +       L    R    V+ P +   + IP L  +   +V       
Sbjct: 74  LRRVMIGFVLGSVIAVPTGFLMGWYRVARAVIDPWVQFFRVIPPLAIIPLAIVTMGIDET 133

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        IF IF +   +   S YQ + ++ +     +R    +    F  + +P S
Sbjct: 134 PK--------IFVIFLAAFLSAVVSTYQGVVSVDKTYINAARVLGANDRVIFTQVIIPAS 185

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++    + +   W  VVA+E+I          G+G  +  A    DL  I  +++ +
Sbjct: 186 TPFILVGFRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVAI 239

Query: 249 LGVIFLYDQLLFRPMIVWSNKF 270
             +  + D+     ++VW+ ++
Sbjct: 240 GILGLIMDR-----IVVWAEEW 256


>gi|304406543|ref|ZP_07388199.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304344601|gb|EFM10439.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 278

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV+  I +     +P+G+WIG      + + P  +L    P   + P+ +     
Sbjct: 88  AVSAARVLSGIALGFAAAVPLGMWIGLTRIGRNGLYPSLELFRPIPLIAYLPVAMLLFKT 147

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  +   G  + IL +    A        + A        +    + LP + 
Sbjct: 148 IEGG----IVFITFIGAFFPILISSRDAARRVSPSLIQAARVLGCGPVQAIWRVYLPAMA 203

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G +W   I  E+ S        TG+G    ++     + + ++G+  + 
Sbjct: 204 PEIFTGLSVGIGASWMGVITGEMMSG------QTGIGYTTWQAYHLLDYDQSIIGMFTIG 257

Query: 564 CFVL---ALNRFLWHPLYLY 580
                  A  R +   L  +
Sbjct: 258 ALGFGSSACIRLVERLLLRW 277



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 17/226 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  IV    + L   S     + +  R+LS + +              +R     L P L
Sbjct: 67  PAAIVSAWYVNLGAESYYTDIAVSAARVLSGIALGFAAAVPLGMWIGLTRIGRNGLYPSL 126

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           ++ + IP++ +L   ++ F  +  G         +F  F    + +  S   +   +   
Sbjct: 127 ELFRPIPLIAYLPVAMLLFKTIEGG--------IVFITFIGAFFPILISSRDAARRVSPS 178

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L + +R       Q  W + +P   P +   + + +   W  V+  EM+          G
Sbjct: 179 LIQAARVLGCGPVQAIWRVYLPAMAPEIFTGLSVGIGASWMGVITGEMMSGQT------G 232

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVWS 267
           IG     A    D    +  M T+  + F      +L+ R ++ W 
Sbjct: 233 IGYTTWQAYHLLDYDQSIIGMFTIGALGFGSSACIRLVERLLLRWQ 278


>gi|295096321|emb|CBK85411.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 263

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 83/239 (34%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           R +         +V  +A    W S   + +     +  + +           I+ +R V
Sbjct: 11  RAAPWFLPVGIVLVWQLASSTGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAV 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   I + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 18/264 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  VLV  + +       +    P  +V+          L Q+ + ++ R +   
Sbjct: 14  PWFLPVGIVLVWQLASSTGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAVIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I          ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTTG 277
              Q L R  + W+  +  +    
Sbjct: 240 VSAQWLERSWLRWNPAYTAQEAKA 263


>gi|111017295|ref|YP_700267.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110816825|gb|ABG92109.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 287

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 23/271 (8%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
              R              Q    +R      +  + V   V +G  W S    ++     
Sbjct: 7   AAPRPTRAEPTGEDRRRPQRAVTRRRLQPSVLLPWVVPVLVILGWQWASSAGAISPSVLP 66

Query: 375 DVLYVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
               V+                 +++ R+++   + + I + +G  +G        +   
Sbjct: 67  PPSKVLATAEQLWTAGELQRHLTVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRT 126

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q+L A P     PL+++      L       +L+  G  + +  N +AG         +
Sbjct: 127 LQMLRALPHLALVPLLIAAFGIGELPK----VVLVTLGVIFPVYLNTVAGIRTVDPKLVQ 182

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +  S+ +      R II+PG  P  +TG   A G AW   +++E  +       + G+G 
Sbjct: 183 LGESYGLGRGARIRDIIVPGAMPMILTGIRYALGVAWLTLVIAETIA------TSEGIGF 236

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 +      +VL +L+     L  ++ 
Sbjct: 237 LAQNGRDMLRNDRIVLAILLYAVAGLLADQI 267



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 94/271 (34%), Gaps = 22/271 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQ 63
               RR+ P++       +++ +                  P  ++           L +
Sbjct: 27  AVTRRRLQPSVLLPWVVPVLVILGWQWASSAGAISPSVLPPPSKVLATAEQLWTAGELQR 86

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + +  R+L    +      V   +   SR    ++   L +++++P L  +   +  F
Sbjct: 87  HLTVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRTLQMLRALPHLALVPLLIAAF 146

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV+   L  IF ++         +    +  +   L ++  S+ L    +   +
Sbjct: 147 GIGELPKVVLVTLGVIFPVY--------LNTVAGIRTVDPKLVQLGESYGLGRGARIRDI 198

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP +MP ++  +  ++   W  +V +E I   +      GIG              I+ 
Sbjct: 199 IVPGAMPMILTGIRYALGVAWLTLVIAETIATSE------GIGFLAQNGRDMLRNDRIVL 252

Query: 244 AMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271
           A+L       L DQ   L+   ++ W+  ++
Sbjct: 253 AILLYAVAGLLADQITRLIEARVLRWNPHYQ 283


>gi|320173466|gb|EFW48665.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella dysenteriae CDC 74-1112]
          Length = 354

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+ ++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTTLLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTTLLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|157159068|ref|YP_001463988.1| glycine betaine transporter membrane protein [Escherichia coli
           E24377A]
 gi|187731166|ref|YP_001881570.1| glycine betaine transporter membrane protein [Shigella boydii CDC
           3083-94]
 gi|191167100|ref|ZP_03028921.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B7A]
 gi|209920122|ref|YP_002294206.1| glycine betaine transporter membrane protein [Escherichia coli
           SE11]
 gi|218555226|ref|YP_002388139.1| glycine betaine transporter membrane protein [Escherichia coli
           IAI1]
 gi|218696275|ref|YP_002403942.1| glycine betaine transporter membrane protein [Escherichia coli
           55989]
 gi|260856789|ref|YP_003230680.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O26:H11 str. 11368]
 gi|293448996|ref|ZP_06663417.1| glycine betaine transporter membrane protein [Escherichia coli
           B088]
 gi|300815919|ref|ZP_07096143.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300916826|ref|ZP_07133530.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|309795137|ref|ZP_07689556.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331678656|ref|ZP_08379330.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H591]
 gi|157081098|gb|ABV20806.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E24377A]
 gi|187428158|gb|ACD07432.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella boydii CDC 3083-94]
 gi|190902882|gb|EDV62610.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B7A]
 gi|209913381|dbj|BAG78455.1| glycine/betaine/proline ABC transporter permease component
           [Escherichia coli SE11]
 gi|218353007|emb|CAU98825.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218361994|emb|CAQ99600.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257755438|dbj|BAI26940.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O26:H11 str. 11368]
 gi|291322086|gb|EFE61515.1| glycine betaine transporter membrane protein [Escherichia coli
           B088]
 gi|300415892|gb|EFJ99202.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300531848|gb|EFK52910.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|308121108|gb|EFO58370.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|320198430|gb|EFW73032.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli EC4100B]
 gi|323154889|gb|EFZ41081.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli EPECa14]
 gi|323183204|gb|EFZ68601.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1357]
 gi|323946350|gb|EGB42379.1| inner membrane transport system [Escherichia coli H120]
 gi|324020307|gb|EGB89526.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324120037|gb|EGC13914.1| inner membrane transport system [Escherichia coli E1167]
 gi|331073486|gb|EGI44807.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H591]
          Length = 354

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|256842287|ref|ZP_05547791.1| choline ABC transporter, permease [Parabacteroides sp. D13]
 gi|262384806|ref|ZP_06077938.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_33B]
 gi|256736171|gb|EEU49501.1| choline ABC transporter, permease [Parabacteroides sp. D13]
 gi|262293522|gb|EEY81458.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_33B]
          Length = 277

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79
            L      + I+ + L    +      +   + + L           +T   +LS+ +I+
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A+S R   ++ P+LD+MQ++P   +L   V++F     G V GA    I
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  +P D+ E +RSF  +  Q  + + +P ++P ++  +  +
Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQT 211

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F V+      +AW   G  V  FT   +L +  +G       T+  V+   IIA
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW          I P   L+   PA V+    V       +       +   
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P D  E   SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQTIMLS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + S G       GLG  +     +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|294085008|ref|YP_003551768.1| putative taurine uptake ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664583|gb|ADE39684.1| probable taurine uptake ABC transporter permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 642

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 10/172 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+V + +  ++ +P+GI++G      S   P  +L    P   + PL+++      
Sbjct: 451 SLFRVIVALTLGILLGVPLGIYMGVSRFFKSFFDPLIELYRPVPPLAWAPLILTIFGIQD 510

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+       ++ +   GAS         + S   T  +  R++ILP   P 
Sbjct: 511 DGK----IFLLFMVAFAIMVISARTGASGTQLSKIRASHSLGATNQQIMRHVILPNAMPE 566

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +TG   A G  W   + +E+ +       TTGLG     +     +  + +
Sbjct: 567 ILTGIRIAVGVCWGTLVAAEMLAG------TTGLGFIENVARTVADYELIWV 612



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 25/255 (9%)

Query: 16  FPNIFDLLAFVLVIGIINIL-----LHGIQETTVP------RDIVDIVPITLDVHSLPQY 64
           + +I D++AF++  G+++ L      HG      P        +         +  L  +
Sbjct: 388 WLSIADVVAFLIPDGLVDALPGSYGTHGTAGEFKPNYKDKLLAVAQGDVYLGSIPMLDGH 447

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R++ A+ + +L           SR       P++++ + +P L +    +  F 
Sbjct: 448 IWDSLFRVIVALTLGILLGVPLGIYMGVSRFFKSFFDPLIELYRPVPPLAWAPLILTIFG 507

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               GK        IF +F      M  S               S S   +  Q   ++ 
Sbjct: 508 IQDDGK--------IFLLFMVAFAIMVISARTGASGTQLSKIRASHSLGATNQQIMRHVI 559

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  + +++   W  +VA+EM+          G+G    +A    D   I   
Sbjct: 560 LPNAMPEILTGIRIAVGVCWGTLVAAEMLAGTT------GLGFIENVARTVADYELIWVT 613

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  +  L+D ++
Sbjct: 614 IILLGMLGLLFDIIM 628


>gi|77456482|ref|YP_345987.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380485|gb|ABA71998.1| taurine ABC transport system, permease protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 279

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT------- 386
                  +  + +     +  +   +    +   +       VL   WL   T       
Sbjct: 21  PVRRSLSTRWISLLTLFALLVIWWAVTASGLIEPLFLPPPSAVLQKGWLLATTGYMDSTL 80

Query: 387 -------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                  + R+ + +  A +  +PVGI IG        + P  +     P   + PL+V 
Sbjct: 81  WQHLGASLSRIGLGLGFAILTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVI 140

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 L+      LL+       I      G           A S   T  +  R++IL
Sbjct: 141 WCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVIL 196

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  +TG     G  W+  + +E+ +       T+GLG  +  + +      VVLG+
Sbjct: 197 PSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGI 250

Query: 560 LIMCCFVLALN---RFLWHPLYLY 580
           L++     A+    R L   L  +
Sbjct: 251 LVIALIAFAMEMGLRALQRKLVPW 274



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+   +  ++L           +R    VL P+++  + IP L +L  
Sbjct: 78  STLWQHLGASLSRIGLGLGFAILTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            EL+ +  I+ +    +  +    +  +       ++S   +  Q
Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 190 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  + F  +   + L R ++ W 
Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275


>gi|193071017|ref|ZP_03051945.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E110019]
 gi|192955675|gb|EDV86150.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E110019]
          Length = 354

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|126727926|ref|ZP_01743752.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
 gi|126702786|gb|EBA01893.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
          Length = 444

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 10/162 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+   +  +  IP+G  +G    +     P  + +   P     PL++       
Sbjct: 253 SLARVVIGFGLGCLFGIPLGFAMGLNNWMRGWFDPIVEFMRPVPPLALIPLIIIWFGIGE 312

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+   + W +     AG S         A S   T  +    +ILP   P 
Sbjct: 313 QGK----ISLLFLASLWIMTIAARAGVSGVNISKVHAAYSLGATKRQLLSKVILPNSLPE 368

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
             TGA  A G  W   + +E+ +         G+G  I  ++
Sbjct: 369 IFTGARVAMGVCWGTVVAAELVAAEK------GVGKMIIAAS 404



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 14/173 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    +  R++    +  LF          +  +     PI++ M+ +P L  +   
Sbjct: 245 GLWENVFWSLARVVIGFGLGCLFGIPLGFAMGLNNWMRGWFDPIVEFMRPVPPLALIPLI 304

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   +  Q 
Sbjct: 305 IIWFGIGEQGK--------ISLLFLASLWIMTIAARAGVSGVNISKVHAAYSLGATKRQL 356

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
              + +P S+P +     ++M   W  VVA+E++          G+G  I  A
Sbjct: 357 LSKVILPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGVGKMIIAA 403


>gi|91780168|ref|YP_555375.1| nitrate/nitrite/cyanate ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692828|gb|ABE36025.1| ABC nitrate/nitrite/cyanate family transporter, inner membrane
           subunit [Burkholderia xenovorans LB400]
          Length = 277

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ R+ + +  A +I +P+G  IG      + + P  Q L       + P+ V
Sbjct: 81  LLVHIATSLRRIAIGLAWALLIGVPLGFLIGRIKAFDTALSPTLQFLRMISPLSWMPIAV 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +          +  L+ F   W ++ +  AG +     + ++A S   T      +I 
Sbjct: 141 MSLGVGDR----AVYFLLAFAAVWPLVMSTAAGVTQIDRRWLQLAESLAATRGEMLWHIF 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +PG+  + +TG   A G  W   + +E+         ++GLG  I ++ ++ ++ E+   
Sbjct: 197 VPGLAAHVLTGVRLAIGILWIVLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAV 250

Query: 559 VLIMCCFVLALN---RFLWHP 576
           +L++      L+   R ++  
Sbjct: 251 ILVIGALGFLLDYAARLIYRR 271



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 17/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTL 70
           R    +  L   V +  +   L+           P   +  +P  +    L  + + +  
Sbjct: 31  RTLLGLTGLAGIVAIWWLAIHLIARPDSLAAQFSPGRALAALPSLVTEDRLLVHIATSLR 90

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+   +  +LL       L  + +     L P L  ++ I  L ++   V+         
Sbjct: 91  RIAIGLAWALLIGVPLGFLIGRIKAFDTALSPTLQFLRMISPLSWMPIAVMSLGVG---- 146

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               + A  F +  + VW +  S    +  I R   +++ S   +  +  W++ VP    
Sbjct: 147 ----DRAVYFLLAFAAVWPLVMSTAAGVTQIDRRWLQLAESLAATRGEMLWHIFVPGLAA 202

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + +++   W  +V +EM+ V        G+G  I           +   +L +  
Sbjct: 203 HVLTGVRLAIGILWIVLVPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGA 256

Query: 251 VIFLYD 256
           + FL D
Sbjct: 257 LGFLLD 262


>gi|326317135|ref|YP_004234807.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373971|gb|ADX46240.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 289

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 103/268 (38%), Gaps = 20/268 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL- 382
           R             + +        F     VA    + S  ++ +  T     ++++  
Sbjct: 30  RRRLRPLEPVAPRTRWLLGAAFFVLFVAAWSVATLGGYVSPTFLASPVTMVQEGWLLFTQ 89

Query: 383 ------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                   +T++RV+    +A+++ +P+GI +G    + + ++PF       PA+ F PL
Sbjct: 90  FGFLHDIGMTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPL 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L       L++  G+ + I+  V     +   D  E A +   T     R 
Sbjct: 150 LILWAGLGELQK----LLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIVRR 205

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++PG  P+         G AW   IV+E+         ++G+G  I +S    +  +++
Sbjct: 206 VLIPGAAPHIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQII 259

Query: 557 LGVLIMCCFVLALNRFLW---HPLYLYG 581
            G++++    L  +         L+ + 
Sbjct: 260 FGIIVIGVIGLVSDFLFKALNRRLFAWS 287



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 91/270 (33%), Gaps = 18/270 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHS 60
            L  + P     R        + FV    +  +  +        P  +V    +      
Sbjct: 32  RLRPLEPVAPRTRWLLGAAFFVLFVAAWSVATLGGYVSPTFLASPVTMVQEGWLLFTQFG 91

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                  T  R+L    ++ L            + +   L P +   + +P   F+   +
Sbjct: 92  FLHDIGMTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLI 151

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            EL  +  IF   V+ +   +  ++ +  +DL E + +   +     
Sbjct: 152 LWAGLG--------ELQKLLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIV 203

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   
Sbjct: 204 RRVLIPGAAPHIAETLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQ 257

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           I++ ++ +  +  + D L   L R +  WS
Sbjct: 258 IIFGIIVIGVIGLVSDFLFKALNRRLFAWS 287


>gi|302522994|ref|ZP_07275336.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302431889|gb|EFL03705.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 247

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 13/211 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL
Sbjct: 47  GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 106

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             ++   +    +   + G +A      + A          +  
Sbjct: 107 AIVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLK 162

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P+ + GA    G +W   + +E+ +         GLG  +  +      P + 
Sbjct: 163 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 216

Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584
           +G+L +    L ++R L      L  +  R 
Sbjct: 217 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 247



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   G+ +   P  +       +   SL      +  R+L   V+ ++       L   
Sbjct: 21  VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 80

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
              +  +L P +   +++P L  +   +V        K        +F IF +       
Sbjct: 81  YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 132

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  Q +    R L + +R         F  + +P S P L+    + +   W  +VA+E+
Sbjct: 133 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 192

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
           I          G+G  +  A    DL  I   +LT+  V  + D+LL R    +  W  +
Sbjct: 193 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 246


>gi|307729437|ref|YP_003906661.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583972|gb|ADN57370.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 285

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 93/251 (37%), Gaps = 17/251 (6%)

Query: 12  SRRIFPNIFDLL----AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
            +R  P++   +    AF +   +  +          P  +       +   +L +    
Sbjct: 27  KKRRLPDLRGFVLPALAFAIWWAVSAVHGGKGGLLVTPEQVWHTTWQQIMSGALAKALGA 86

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R  S   I  +           SR    ++ P  D  + I +  ++    V+F    
Sbjct: 87  SLAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLISVWFGLGD 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+   LAA+  +               +  +PR   E +R FR + WQ  W++ +P 
Sbjct: 147 AAKVVFLSLAALLPVAAHTC--------DGIHAVPRSYVEAARVFRYTRWQLVWHVILPA 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   + +++   W   + +E ++V  +     GIG+ +    +   +  +L+ ++ 
Sbjct: 199 ALPSIFTGLYLALIYSWLATLGAEYLLVAGS-----GIGNTLIDGSENFRMDLVLFGIVV 253

Query: 248 MLGVIFLYDQL 258
           +  +  L   L
Sbjct: 254 VGVIGSLLSGL 264



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 85/246 (34%), Gaps = 11/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCIT 386
           +  L       +  +    W+ V                V H T+Q ++   +      +
Sbjct: 28  KRRLPDLRGFVLPALAFAIWWAVSAVHGGKGGLLVTPEQVWHTTWQQIMSGALAKALGAS 87

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R      I +++ + +GI +G     S  I P            + PL+         
Sbjct: 88  LAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLISVWFGLGDA 147

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              ++LS          +  +   G  A P  + E A  F  T W+   ++ILP   P  
Sbjct: 148 AKVVFLS----LAALLPVAAHTCDGIHAVPRSYVEAARVFRYTRWQLVWHVILPAALPSI 203

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A   +W A++ +E        +  +G+G  + + +E      V+ G++++    
Sbjct: 204 FTGLYLALIYSWLATLGAEYLL-----VAGSGIGNTLIDGSENFRMDLVLFGIVVVGVIG 258

Query: 567 LALNRF 572
             L+  
Sbjct: 259 SLLSGL 264


>gi|301629375|ref|XP_002943818.1| PREDICTED: probable ABC transporter permease protein
           BruAb2_1124-like [Xenopus (Silurana) tropicalis]
          Length = 274

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 13/204 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RVV   ++A+ I +P+GI +G    + + ++PF       PA+ F PL++     
Sbjct: 81  GMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGL 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       L++  G+ + I+  V         D  E A +   T     R +++PG  
Sbjct: 141 GELQK----LLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATHGGIVRRVLIPGAA 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I +S    +  +++ G++I+ 
Sbjct: 197 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIIIG 250

Query: 564 CFVLALN---RFLWHPLYLYGTRC 584
              L  +   +F+   L+++    
Sbjct: 251 LIGLVSDSFFKFVNRRLFVWSALR 274



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 80/229 (34%), Gaps = 17/229 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +     +             T  R++   V++              + +   L 
Sbjct: 57  LASPITMAKEGWLLFTEFDFLHDIGMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLE 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   + +P   F+   +++            EL  +  IF   V+ +   +   + N 
Sbjct: 117 PFVSFCRYLPASAFIPLLILWAGLG--------ELQKLLVIFIGSVFQIILMVAVIVGNA 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +DL E + +   +       + +P + P +   + + +   W +V+ +E+I        
Sbjct: 169 RKDLVEAAYTLGATHGGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSSS---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             GIG  I  +    +   I++ ++ +  +  + D   + + R + VWS
Sbjct: 225 --GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDSFFKFVNRRLFVWS 271


>gi|296125208|ref|YP_003632460.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira
           murdochii DSM 12563]
 gi|296017024|gb|ADG70261.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 264

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 97/245 (39%), Gaps = 18/245 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74
           I  +  F++V  ++         T  P ++   +  +++      ++  +   +  R+L+
Sbjct: 19  IISIAGFLIVWQLLTTYTPIKITTPKPLEVFKFLLWSINHNIGQQTILGHVLISIFRVLA 78

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I  +   +       ++ +  V+ P  ++ + IP + ++   +++F           
Sbjct: 79  GFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAILWFGIG-------- 130

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E+  IF IF     N+T + Y     +   L   ++    +    F ++ +P S+P +  
Sbjct: 131 EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVILPASVPQIFN 190

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M +  S  W  V+A+EM+          G+G  I       ++  +L  M+T+  V  L
Sbjct: 191 GMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAGMITIGIVGLL 244

Query: 255 YDQLL 259
              L+
Sbjct: 245 LSSLM 249



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++FRV+    I ++  I +GI +G   ++ + ++PF ++    P   + P+ +
Sbjct: 65  ILGHVLISIFRVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAI 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +    ++  GT   +  N  AG+S         A          + ++I
Sbjct: 125 LWFGIG----EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVI 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G       +W   + +E+ S         G+G  I   ++  + P+V+ G
Sbjct: 181 LPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAG 234

Query: 559 VLIMCCFVLALNRFL 573
           ++ +    L L+  +
Sbjct: 235 MITIGIVGLLLSSLM 249


>gi|296125207|ref|YP_003632459.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Brachyspira murdochii DSM 12563]
 gi|296017023|gb|ADG70260.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 277

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++   +    + + I IP+GI + +    +    P   L+   P   +
Sbjct: 78  PDNGTLFQHILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAW 137

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++              S ++        + N  +G  A       VA +F  +  + 
Sbjct: 138 IPMMILWFGIGLG----AKSAIVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRGQM 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            + + +P   PY  TG   + G +W +   +E+ +       + GLG  I  + +     
Sbjct: 194 LKEVAIPTALPYIFTGLRVSLGASWTSLCAAEMLA------ASRGLGFMIQLNRQLARAD 247

Query: 554 EVVLGVLIMCCFVLAL 569
            +++G+L +      L
Sbjct: 248 LIIVGMLTIGAVGAIL 263



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 90/248 (36%), Gaps = 21/248 (8%)

Query: 15  IFPNIFDLLAFVLVIGII--NILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASR 67
              ++  ++ F+++  +I     L        P  +       L     D  +L Q+   
Sbjct: 30  FIISVISVVIFLIIWQLITDVFKLFPSYSLPSPYTVFKSFIYKLTNKAPDNGTLFQHILA 89

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +    L+   +            A  ++  +V  P+ D+++ IP + ++   +++F    
Sbjct: 90  SLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAWIPMMILWFGIGL 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K           +F S       + Y  +    +    V+++F  S  Q    + +P 
Sbjct: 150 GAKSA--------IVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRGQMLKEVAIPT 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   + +S+   W  + A+EM+          G+G  I L  +      I+  MLT
Sbjct: 202 ALPYIFTGLRVSLGASWTSLCAAEMLAAS------RGLGFMIQLNRQLARADLIIVGMLT 255

Query: 248 MLGVIFLY 255
           +  V  + 
Sbjct: 256 IGAVGAIL 263


>gi|302554989|ref|ZP_07307331.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302472607|gb|EFL35700.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 304

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 10/226 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P D+ ++V        L  Y   +  R L     +L+       L A+ + +   L
Sbjct: 78  KLPAPSDVWNVVQTAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAAL 137

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++                   I    V ++   +   +  
Sbjct: 138 GPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA--------VILLGAVPSIANGLVSGVDQ 189

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I       
Sbjct: 190 VPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFPD 247

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
              G+G  +       D+  +  A+L +L V    D L+F P+  W
Sbjct: 248 LGVGLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFSPLERW 293



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++    A +I  P+G+ +     + + + P    L + P+  + P 
Sbjct: 96  GELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAALGPILSGLQSLPSVAWVPP 155

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  F     +   TG +   +
Sbjct: 156 AVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWH 211

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 212 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 269

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 270 EAILLILIVGIAIDLLIFSPLERWVLR 296


>gi|113477530|ref|YP_723591.1| glycine betaine ABC transporter substrate-binding protein
           [Trichodesmium erythraeum IMS101]
 gi|110168578|gb|ABG53118.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Trichodesmium erythraeum IMS101]
          Length = 662

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 25/239 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLSAMVIS 79
           L F+++ G++   L G       R I     I+L +       + +  +   +L+A++  
Sbjct: 76  LIFLIITGLLVWQLAG-------RKIAIYSFISLCIIGFCGAWEQSMVSLSLILTAVIFC 128

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L         A S R   +L P+LD MQ++P   +L   V+ F           E++ I
Sbjct: 129 MLIGIPLGIACALSDRFNKILRPLLDGMQTLPTFVYLVPVVMLFGIG--------EVSGI 180

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A F   V  +       +  +  +  E + +F  +  Q    + +P ++P ++     +
Sbjct: 181 IATFVFAVPPLIRLTNLGIRQVSPEAVEAALAFGSTRQQVLLEVQIPLALPTILAGTNQA 240

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +       V + MI V        G+G  +   +   ++       L ++ +  + D++
Sbjct: 241 ILLALSMSVVTSMIGV-------EGLGQMVLQGLGRLNVGLAAIGGLGIVLIAIMLDRI 292



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 97/272 (35%), Gaps = 18/272 (6%)

Query: 308 PLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-AWQSIG 365
           PL   V  L   L    RF F    L +    R+  +  +    ++  +  G+  WQ  G
Sbjct: 32  PLEEWVNNLVDFLVDNFRFIFQAISLPISGTLRIVELTFLAIPPLIFLIITGLLVWQLAG 91

Query: 366 YIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
             +  +++  +  + + G      +++  ++  +I   +I IP+GI        +  ++P
Sbjct: 92  RKIAIYSFISLCIIGFCGAWEQSMVSLSLILTAVIFCMLIGIPLGIACALSDRFNKILRP 151

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               +   P  V+   VV       ++  +   +         ++     G      +  
Sbjct: 152 LLDGMQTLPTFVYLVPVVMLFGIGEVSGIIATFVF----AVPPLIRLTNLGIRQVSPEAV 207

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A +F  T  +    + +P   P  + G   A   A + S+V+ +           GLG
Sbjct: 208 EAALAFGSTRQQVLLEVQIPLALPTILAGTNQAILLALSMSVVTSMIG-------VEGLG 260

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +   + +     +G L +    + L+R 
Sbjct: 261 QMVLQGLGRLNVGLAAIGGLGIVLIAIMLDRI 292


>gi|255016499|ref|ZP_05288625.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 2_1_7]
          Length = 277

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79
            L      + I+ + L    +      +   + + L           +T   +LS+ +I+
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A+S R   ++ P+LD+MQ++P   +L   V++F     G V GA    I
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  +P D+ E +RSF  +  Q  + + +P ++P ++  +  +
Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSTQLLYKVQLPLALPTIMTGVNQT 211

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F V+      +AW   G  V  FT   +L +  +G       T+  V+   IIA
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW          I P   L+   PA V+    V       +       +   
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P D  E   SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSTQLLYKVQLPLALPTIMTGVNQTIMLS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + S G       GLG  +     +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|46580703|ref|YP_011511.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120602005|ref|YP_966405.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris
           DP4]
 gi|46450122|gb|AAS96771.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562234|gb|ABM27978.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris DP4]
 gi|311234422|gb|ADP87276.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris RCH1]
          Length = 283

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    T   +L A  ++++        AA +  +  VL+P+LD+MQ++P   +L   
Sbjct: 88  GLWEATMSTIALVLVATALAVVTGVPLGIAAAVNVTVRKVLMPVLDLMQTMPAFVYLIPA 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           ++AA+FA     +          +  +P DL E + +F  S WQ+
Sbjct: 148 IPFFGLG--------KVAAVFATVVFAMPPAIRFTCLGIRQVPDDLVECAEAFGTSRWQR 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P + P ++  +  ++      VV + MI          G+G  +  AI+  +L 
Sbjct: 200 LVKLELPLAAPTILAGVNQTIMLALSMVVIAAMI-------GARGLGGEVWKAIQRLELG 252

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           +   A + ++ V    D++L
Sbjct: 253 SGFEAGIGIVIVAICLDRVL 272



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 87/281 (30%), Gaps = 29/281 (10%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           N + +   ++  F +   N +  L   LG I        + L + +         +  + 
Sbjct: 21  NMVEWCSGATRAFSTVAGNGIDMLESLLGSIPPWAFIPVVALLAWRATRKPGIGAFALLG 80

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+   +                          T+  V+V   +A +  +P+GI      
Sbjct: 81  FGLIWNLGLWE------------------ATMSTIALVLVATALAVVTGVPLGIAAAVNV 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   L+   PA V+    +       +       +  +     +       G 
Sbjct: 123 TVRKVLMPVLDLMQTMPAFVYLIPAIPFFGLGKVAAVFATVVFAMPPAIRF----TCLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P+D  E A +F  + W+    + LP   P  + G       A +  +++ +      
Sbjct: 179 RQVPDDLVECAEAFGTSRWQRLVKLELPLAAPTILAGVNQTIMLALSMVVIAAMIG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG  + ++ ++          + +    + L+R L
Sbjct: 235 ---ARGLGGEVWKAIQRLELGSGFEAGIGIVIVAICLDRVL 272


>gi|37954428|gb|AAP69760.1| ABC transporter component C [Rhodococcus sp. DS7]
          Length = 290

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   FT  +   +      ++ R +    +A  I IP+GI I +   +S  + P  +L 
Sbjct: 79  VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 138

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
               A    P+ V  +     +       L+I+   + IL N I+G         + A+S
Sbjct: 139 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 194

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  R ++ ++LP   P   TG   A   +    I +E+           GLG  I  
Sbjct: 195 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 248

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           S      P +  G++ +    L +N     +   L  +
Sbjct: 249 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 286



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72
           RI      +  F+ +      L    +    P   V     TL +   L ++ S +  R 
Sbjct: 44  RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 103

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   +++          A  R +   L PIL++ ++   L  L   V+           
Sbjct: 104 LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 157

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  +  +  + +  +    +  +   L + + S   S  + F  + +P ++P +
Sbjct: 158 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 215

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M+ +     ++A+EM+          G+G  I  +     +  +   ++ +  + 
Sbjct: 216 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 269

Query: 253 FLYD---QLLFRPMIVW 266
              +    L+ R +  W
Sbjct: 270 LTINAILVLIERRLSRW 286


>gi|87121997|ref|ZP_01077882.1| glycine betaine/L-proline ABC transporter, permease protein
           [Marinomonas sp. MED121]
 gi|86162795|gb|EAQ64075.1| glycine betaine/L-proline ABC transporter, permease protein
           [Marinomonas sp. MED121]
          Length = 311

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +IGII   L G Q       +   + +T L +  +   +  T   +L+A+   ++  
Sbjct: 57  IPPLIGIILSSLLGWQVAGKKMGLFCAITLTILGLIGVWAESMTTLSLVLTALFFCVVIG 116

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L+A+S R+  ++ P+LD MQ++P   +L   V+ F     G V G  +  IFA  
Sbjct: 117 VPLGILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLFG---IGNVPGVLVTIIFA-- 171

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +P D  E +R+F  +  Q    + +P + P ++  +  ++   
Sbjct: 172 ---LPPLVRLTNLGIRQVPEDKIEAARAFGCTPKQMLLKIQLPLATPTIMAGINQTLMLS 228

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI VG       G+G  +   I   D+       + ++ +    D+L
Sbjct: 229 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +   ++  + WQ  G     +     T   ++ V      T+  V+  +    +I +P+
Sbjct: 60  LIGIILSSLLGWQVAGKKMGLFCAITLTILGLIGVWAESMTTLSLVLTALFFCVVIGVPL 119

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +   ++P    +   PA V+   VV          N+   L+ I      +
Sbjct: 120 GILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIIFALPPL 175

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P D  E A +F  T  +    I LP   P  + G       + +  +++
Sbjct: 176 VRLTNLGIRQVPEDKIEAARAFGCTPKQMLLKIQLPLATPTIMAGINQTLMLSLSMVVIA 235

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 236 SMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276


>gi|299132877|ref|ZP_07026072.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298593014|gb|EFI53214.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 279

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 108/269 (40%), Gaps = 26/269 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLH---------GIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +   A  L++ ++  +             +    P  I +++        L ++   
Sbjct: 21  PPRWIKPALGLIVPLVVGIGWEIAVARGWSNGRLVPPPSKIYEMLAQLAKSGELSRHVFI 80

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT R+ +   + ++   +   L   S     +L P L  +++IP + ++   V++     
Sbjct: 81  TTWRVGAGFGLGVVSGTLLGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFVLWLGIF- 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E++ +  I     + +   +  ++ ++ R + EV R FRLSG      + +P 
Sbjct: 140 -------EMSKVALIAIGVFFPIYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPA 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P  V ++   +  GW FVVA+E++   +      G+G  +    +      IL A++ 
Sbjct: 193 VLPSYVVSLRQGLGLGWMFVVAAELMGASE------GLGYLLIDGQQLGKPAEILAAIIV 246

Query: 248 MLGVIFLYDQLL---FRPMIVWSNKFRLE 273
              +    D L+   F P++ W + F  +
Sbjct: 247 FALLGKTTDWLVQLAFAPLLRWQDAFSSQ 275



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 22/255 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI----- 380
             P  +++      V  ++ I W      +A+   W +   +       ++L  +     
Sbjct: 19  SRPPRWIKPALGLIVPLVVGIGWE-----IAVARGWSNGRLVPPPSKIYEMLAQLAKSGE 73

Query: 381 --WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 IT +RV     +  +    +G   G+ P     + P  Q L A P+  + PL V
Sbjct: 74  LSRHVFITTWRVGAGFGLGVVSGTLLGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFV 133

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +  + ++       L+  G  + I   V+    +      EV   F ++G    R I+
Sbjct: 134 LWLGIFEMSK----VALIAIGVFFPIYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRIL 189

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + P YV       G  W   + +E+         + GLG  + +  + G   E++  
Sbjct: 190 LPAVLPSYVVSLRQGLGLGWMFVVAAELMG------ASEGLGYLLIDGQQLGKPAEILAA 243

Query: 559 VLIMCCFVLALNRFL 573
           +++        +  +
Sbjct: 244 IIVFALLGKTTDWLV 258


>gi|282856693|ref|ZP_06265959.1| inner membrane protein [Pyramidobacter piscolens W5455]
 gi|282585458|gb|EFB90760.1| inner membrane protein [Pyramidobacter piscolens W5455]
          Length = 300

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L + ++ +L+   + +     +   +   +    L Q    T   +L++++I+L+    
Sbjct: 57  PLFLLLVALLVWRARRSLRSGVLYAALVAAIGFAGLWQMMLVTLSVVLASVMIALVIGIP 116

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L + S     +L P+LD MQ++P+  +L   ++ F       VI   + A+  +   
Sbjct: 117 IGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGTGNASGVIATVIYAVVPVIRL 176

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + +++ E +R+F  + WQ  + + +P + P ++  +  ++     
Sbjct: 177 --------TSLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPTIMAGVNQTLMMAMA 228

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  +  A+   ++   L A   ++ +  + D++
Sbjct: 229 MVVTTSMIGV-------RGLGMEVLNAVNRIEIGRGLVAGSCVVVLAIVLDRV 274



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 80/234 (34%), Gaps = 17/234 (7%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIIIA 397
           L    + +   +   + W++   + +   Y  ++  I       +  +T+  V+  ++IA
Sbjct: 51  LRHVPWPLFLLLVALLVWRARRSLRSGVLYAALVAAIGFAGLWQMMLVTLSVVLASVMIA 110

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IP+GI I      +  ++P    +   P  V+    +      + +  +   +  +
Sbjct: 111 LVIGIPIGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGTGNASGVIATVIYAV 170

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E A +F  T W+    + +P   P  + G       A
Sbjct: 171 V----PVIRLTSLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPTIMAGVNQTLMMA 226

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
               + + +           GLG  +  +  +      ++    +    + L+R
Sbjct: 227 MAMVVTTSMIG-------VRGLGMEVLNAVNRIEIGRGLVAGSCVVVLAIVLDR 273


>gi|125975273|ref|YP_001039183.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256003068|ref|ZP_05428060.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281419262|ref|ZP_06250278.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125715498|gb|ABN53990.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255992759|gb|EEU02849.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281407128|gb|EFB37390.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316939435|gb|ADU73469.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 302

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 76/206 (36%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V      ++   +     +   +     +A  + IP  + IG++  +   + P  ++L  
Sbjct: 95  VLGLLISELPEFLKGTLSSFQLLFAGYFLALALAIPSALVIGWKKRLYKAVNPLTKVLGP 154

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V+ P  ++ +  +        + ++  G  W +  N + G         + A +  
Sbjct: 155 IPPIVYIPYAIAILPTF----KAASTFIIFIGAFWPVFINTLNGVFNVDKRIIDSAKALS 210

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +        +ILP   P  ++GA      ++     +E+         T+GLG Y+   +
Sbjct: 211 VNEGSMLFQVILPATLPSIISGATVGLVMSFILLTAAEMIG------ATSGLGWYVKYFS 264

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   +P V+ G++ +   V  +    
Sbjct: 265 DFADYPRVIAGIIFIGVVVTGVTFLF 290



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 91/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   ++V  I             P     +  +  ++    +    +   + +   ++L 
Sbjct: 67  VYGILIVWEIFTTKTDLADRHLFPSPSSVLGLLISELPEFLKGTLSSFQLLFAGYFLALA 126

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +    +RL   + P+  ++  IP + ++ + +              + A+ F 
Sbjct: 127 LAIPSALVIGWKKRLYKAVNPLTKVLGPIPPIVYIPYAIAIL--------PTFKAASTFI 178

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF    W +  +    + N+ + + + +++  ++     + + +P ++P ++    + + 
Sbjct: 179 IFIGAFWPVFINTLNGVFNVDKRIIDSAKALSVNEGSMLFQVILPATLPSIISGATVGLV 238

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +  + A+EMI          G+G Y+       D   ++  ++ +  V+     L   
Sbjct: 239 MSFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVIAGIIFIGVVVTGVTFLFDK 292

Query: 259 LFRPMIVW 266
           + R ++ W
Sbjct: 293 IERYLLRW 300


>gi|150006771|ref|YP_001301514.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|298377733|ref|ZP_06987684.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|301309036|ref|ZP_07214981.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 20_3]
 gi|149935195|gb|ABR41892.1| glycine betaine/L-proline transport system permease
           [Parabacteroides distasonis ATCC 8503]
 gi|298265436|gb|EFI07098.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 3_1_19]
 gi|300833062|gb|EFK63687.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacteroides sp. 20_3]
          Length = 277

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79
            L      + I+ + L    +      +   + + L           +T   +LS+ +I+
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A+S R   ++ P+LD+MQ++P   +L   V++F     G V GA    I
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  +P D+ E +RSF  +  Q  + + +P ++P ++  +  +
Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQT 211

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F V+      +AW   G  V  FT   +L +  +G       T+  V+   IIA
Sbjct: 40  GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW          I P   L+   PA V+    V       +       +   
Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P D  E   SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQTIMLS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + S G       GLG  +     +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|253576983|ref|ZP_04854306.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843593|gb|EES71618.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 281

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D          T   ++++ +IS+LF       +A S+ +  V+ P+LD MQ++P   +
Sbjct: 81  IDNLGYWTETMNTLGLVITSGLISILFGIPIGIWSAYSKMVHRVISPLLDFMQTMPAFVY 140

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V +F     G V G   + IFAI            Y  +  +  +L E + +F  +
Sbjct: 141 LLPAVTFFSL---GVVPGVIASVIFAIP-----PTIRLTYLGIKQVNGELTEAANAFGST 192

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQK + + +P +MP L+  +  ++      VV + MI          GIG+ +  A+ +
Sbjct: 193 VWQKLFKVELPLAMPTLMAGVNQTIMLSLSMVVIASMI-------GAQGIGATVYRAVTQ 245

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +     A L ++ +  + D+ 
Sbjct: 246 LKIGQGFEAGLAVVVLAIVLDRF 268



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 11/224 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V     +   WQ   + V  F   D L        T+  V+   +I+ +  IP+GIW 
Sbjct: 56  AIVGIIAYLIGKWQLTLFTVIGFLLIDNLGYWTETMNTLGLVITSGLISILFGIPIGIWS 115

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            +   +   I P    +   PA V+    V+  S   +   +   +  I       +   
Sbjct: 116 AYSKMVHRVISPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAI----PPTIRLT 171

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G      +  E A++F  T W+    + LP   P  + G       + +  +++ +  
Sbjct: 172 YLGIKQVNGELTEAANAFGSTVWQKLFKVELPLAMPTLMAGVNQTIMLSLSMVVIASMIG 231

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+GA +  +  +    +     L +    + L+RF
Sbjct: 232 -------AQGIGATVYRAVTQLKIGQGFEAGLAVVVLAIVLDRF 268


>gi|170734833|ref|YP_001773947.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820871|gb|ACA95452.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 275

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 88/263 (33%), Gaps = 27/263 (10%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377
                   +     R        W  V   VA    W +  +++                
Sbjct: 8   RRSSAPDTRRRGGARFPARSAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAF 67

Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      ++    +++ R+ V +  A +  +P+G+ +G    +   + P  Q L  
Sbjct: 68  ASLRSLCADDQLLEHMLVSLRRIGVGLGAALLAGVPLGLLLGRVRWVERMLSPTFQFLRM 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + PL V             +  L+ F   W +L +  AG +     + ++ +S  
Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLA 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T      +I+LP I    + G   A G  W   + +E+           GLG  I ++ 
Sbjct: 184 ATRRELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           ++ ++ E+   ++++      L+
Sbjct: 238 DRLAYAELTAVIVVIGALGFTLD 260



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETT------VPRDIVDIVPITLDVHSLP 62
                R       +   V  + +    +H + E         P      +        L 
Sbjct: 21  ARFPARSAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAFASLRSLCADDQLL 80

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   +  R+   +  +LL       L  + R +  +L P    ++ +  L ++   V+ 
Sbjct: 81  EHMLVSLRRIGVGLGAALLAGVPLGLLLGRVRWVERMLSPTFQFLRMVSPLSWMPLAVMS 140

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           + A  F +  + +W +  S    +  I R   ++  S   +  +   +
Sbjct: 141 FGIG--------DRAIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLAATRRELLVH 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P     L+  + +++   W  +V +EM+ V        G+G  I           + 
Sbjct: 193 IVLPAIAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYAELT 246

Query: 243 YAMLTMLGVIFLYD 256
             ++ +  + F  D
Sbjct: 247 AVIVVIGALGFTLD 260


>gi|114764393|ref|ZP_01443619.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit
           [Pelagibaca bermudensis HTCC2601]
 gi|114543147|gb|EAU46165.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 328

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 19/236 (8%)

Query: 24  AFVLVIGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             ++++ +I     G +    V   +  +  ++ D   L   A  T   +++A+V+  + 
Sbjct: 63  LMLILLVLIAWQAAGSRTAIIVGVALTCLGLLSPDAWGL---AMTTLAIVIAAVVVCFVI 119

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LAAK+     +L P+LD MQ+IP   +L   V+       G V G  +  IFA 
Sbjct: 120 GLPLGILAAKNDTFEKMLRPVLDTMQTIPAFVYLVPVVMLVG---IGNVSGVIVTIIFA- 175

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +       +  +   + E +R+F  S  Q  + + +P + P ++  +  ++  
Sbjct: 176 ----LPPLIRLTSLGIRGVNPSVVEAARAFGASPRQILFKVELPLATPTILAGVNQTIML 231

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI V        G+G+ +  A+   D    +   L ++ +  + D++
Sbjct: 232 SLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRI 280



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V   L +    ++   A G     I  +              L   T+  V+  +++  +
Sbjct: 59  VPPTLMLILLVLIAWQAAGSRTAIIVGVALTCLGLLSPDAWGLAMTTLAIVIAAVVVCFV 118

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI           ++P    +   PA V+   VV  V   +++  +   +     
Sbjct: 119 IGLPLGILAAKNDTFEKMLRPVLDTMQTIPAFVYLVPVVMLVGIGNVSGVIVTIIF---- 174

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G         E A +F  +  +    + LP   P  + G       + +
Sbjct: 175 ALPPLIRLTSLGIRGVNPSVVEAARAFGASPRQILFKVELPLATPTILAGVNQTIMLSLS 234

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + S         GLG  +  +  +    + ++G L +    + L+R 
Sbjct: 235 MVVIASMIS-------VKGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRI 280


>gi|74310937|ref|YP_309356.1| taurine transporter subunit [Shigella sonnei Ss046]
 gi|73854414|gb|AAZ87121.1| taurine transport system permease protein [Shigella sonnei Ss046]
 gi|323164155|gb|EFZ49962.1| taurine transport system permease protein tauC [Shigella sonnei
           53G]
          Length = 275

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  +V+AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSVLAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 104/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S+   + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSVLAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|239630970|ref|ZP_04674001.1| taurine transport system permease protein tauC [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239527253|gb|EEQ66254.1| taurine transport system permease protein tauC [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 264

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV V +  A I+ IP+G++  +   I S I P  Q L   P   ++ L++  +  
Sbjct: 71  LLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLILWLGI 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I        S    +++  A+S     W+ +  +I P   
Sbjct: 131 GEASK----VLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRVIFPASL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++ +++M 
Sbjct: 187 PAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIVDIVVMG 240

Query: 564 CFVLALNRFL 573
              + L+ FL
Sbjct: 241 ITGMLLDWFL 250



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 81/198 (40%), Gaps = 14/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+   T  R+  A+  +++        ++ +  +G ++ PI+  ++ IP L + T  ++
Sbjct: 67  WQHYLLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLIL 126

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E + +  +F S +  +  + Y ++  I  +    + S   + WQ F 
Sbjct: 127 WLGIG--------EASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFL 178

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P S+P ++  +  ++   +  +V++EMI          GIG  +  A        +
Sbjct: 179 RVIFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVM 232

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  ++ M     L D  L
Sbjct: 233 IVDIVVMGITGMLLDWFL 250


>gi|300906825|ref|ZP_07124506.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300401426|gb|EFJ84964.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
          Length = 354

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|218531939|ref|YP_002422755.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524242|gb|ACK84827.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 283

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T + +  A   +L+         A SRR      PILD+MQ++P   +L   +
Sbjct: 87  LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F            ++A FA     V  +       + N+P +L E S +F  S  QK 
Sbjct: 147 PFFGLG--------AVSACFATIVFSVPPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  +M      VV + MI  G       G+G  +  +I+  +  A
Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVVAAMIGAG-------GLGRAVWQSIQRLEAGA 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A + ++ V  + D++
Sbjct: 252 GFEAGIGIVIVAVILDRV 269



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368
           N +  L      +                 + +    W C+            + IG + 
Sbjct: 16  NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75

Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +W   + T+  V +    A +I +PVGIW            P   ++  
Sbjct: 76  LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+ V+    +       ++      +     +   ++     G    P++  E + +F 
Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVPPVIRLTALGIRNVPSELVEASDAFG 191

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    + LP   P  + G       A +  +V+ +   G       GLG  + +S 
Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVVAAMIGAG-------GLGRAVWQSI 244

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
           ++          + +    + L+R
Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268


>gi|325264233|ref|ZP_08130965.1| nitrate transport permease protein NrtB [Clostridium sp. D5]
 gi|324030717|gb|EGB92000.1| nitrate transport permease protein NrtB [Clostridium sp. D5]
          Length = 262

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 13/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++ RV+V  I++S+    VG+ +G      +   P   ++   P   + PL +
Sbjct: 63  LLGHVGISLSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAI 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N+ +  ++  G    ++ N +AGA     +   VA    +   R +  I+
Sbjct: 123 LWFGTG----NVTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIV 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY  +G   +   +W A + +E+ +       T+G G  I    + G+    V+G
Sbjct: 179 LPSCVPYIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMG 232

Query: 559 VLIMCCFVLAL---NRFLWHPLYLYGTR 583
           ++ +    L L    R +   L  +  R
Sbjct: 233 MISIGIVGLILASFMRVMERRLCSWKER 260



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 106/264 (40%), Gaps = 21/264 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRT 68
           + IF     +  F+++  I  ++         P  ++  +       +  ++L  +   +
Sbjct: 11  QTIFIGALGIFTFLVIWQISVMVTRFGTIFPAPFKVLLGMANAVFEPIGKNTLLGHVGIS 70

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L   ++S +   +   +   S+    +  PI +I++ IP + ++   +++F     
Sbjct: 71  LSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAILWFGTGN- 129

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  +   F IF      M  +      N+ ++L  V+R   L   + F  + +P  
Sbjct: 130 -------VTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIVLPSC 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + +S+S  W  V+A+EMI          G G  I   ++  +++  +  M+++
Sbjct: 183 VPYIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMGMISI 236

Query: 249 LGVIFLYD---QLLFRPMIVWSNK 269
             V  +     +++ R +  W  +
Sbjct: 237 GIVGLILASFMRVMERRLCSWKER 260


>gi|320180199|gb|EFW55135.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Shigella boydii ATCC 9905]
          Length = 354

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 IIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IIIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|333023182|ref|ZP_08451246.1| putative nitrate ABC transporter, permease [Streptomyces sp.
           Tu6071]
 gi|332743034|gb|EGJ73475.1| putative nitrate ABC transporter, permease [Streptomyces sp.
           Tu6071]
          Length = 235

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 80/211 (37%), Gaps = 13/211 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV++  ++  ++ +PVG  +G+ P + + ++P+ Q   A P     PL
Sbjct: 35  GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 94

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             ++   +    +   + G +A        A          +  
Sbjct: 95  AIVLLGIGETPK----VFVIFLASFLATVVAALEGVTATDRTLINAARVLGAPDRVIFLK 150

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P+ + GA    G +W   + +E+ +         GLG  +  +      P + 
Sbjct: 151 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 204

Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584
           +G+L +    L ++R L      L  +  R 
Sbjct: 205 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 235



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 17/240 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   G+ +   P  +       +   SL      +  R+L   V+ ++       L   
Sbjct: 9   VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 68

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
              +  +L P +   +++P L  +   +V        K        +F IF +       
Sbjct: 69  YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 120

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  + +    R L   +R         F  + +P S P L+    + +   W  +VA+E+
Sbjct: 121 AALEGVTATDRTLINAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 180

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269
           I          G+G  +  A    DL  I   +LT+  V  + D+LL R    +  W  +
Sbjct: 181 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 234


>gi|307131481|ref|YP_003883497.1| alkanesulfonates transport system permease [Dickeya dadantii 3937]
 gi|306529010|gb|ADM98940.1| Alkanesulfonates transport system permease protein [Dickeya
           dadantii 3937]
          Length = 263

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 102/253 (40%), Gaps = 18/253 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84
           V+V  + + +           + + +    L     L Q+ S +T R L+   I      
Sbjct: 22  VIVWQLASSVGWLSTRILPSPEAIAVTFWRLTRSGELWQHLSISTWRALTGFAIGGALGL 81

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +   SR    +L   + +++++P L  +   +++F           E A IF +  
Sbjct: 82  ALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIE--------ESAKIFLVAL 133

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  + Y  + NI   L E+SRS+ LSG++ F  + +P ++P ++  +  S+   W
Sbjct: 134 GTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFREVLLPGALPSIMVGVRFSLGLMW 193

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFR 261
             ++ +E I          GIG     A +      ++ A++    +  L D +   L R
Sbjct: 194 LTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVIALTLER 247

Query: 262 PMIVWSNKFRLER 274
             + W   ++L  
Sbjct: 248 IWLRWHPSWQLTE 260



 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +R +    I   + + +G   G        +    Q+L   P     PLV+      
Sbjct: 64  ISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIE 123

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT + +  N   G     +   E++ S+ ++G+R +R ++LPG  P
Sbjct: 124 ----ESAKIFLVALGTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFREVLLPGALP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G  W   IV+E  S       ++G+G     + E      VV+ +++   
Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 565 FVLALNRF 572
                +  
Sbjct: 234 LGKLADVI 241


>gi|163852899|ref|YP_001640942.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664504|gb|ABY31871.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 285

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 16/266 (6%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V         I   F  + L   +       L   WF     +    A+ +       
Sbjct: 14  RAVAAPVPRRAGIGARFGASALDRLAPLLGLAGLLALWFAGGLVLGSVPAYAAFAGFAPG 73

Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 + ++  G        ++ R+   + +A  +  P+G+ +G  P     +QP  QL
Sbjct: 74  PALASFIELLTSGEAWRAAAPSLARIGQGLAVAFGLGAPLGLLVGSVPLAERILQPPFQL 133

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       + P+ V     +       +  L+     W ILF   AG       +  +A 
Sbjct: 134 LRMISPLAWMPVAVLAFPSWDG----AIVFLIAAAAIWPILFATAAGVKRVDPVWLAMAR 189

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +         R +I+P +    +TG   A G AW   + +E          T+GLG  I 
Sbjct: 190 NLGAGRLAALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAIN 243

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  S+  +   VL++     AL+
Sbjct: 244 DARDTLSYDRLAALVLLIGGIGYALD 269



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 81/238 (34%), Gaps = 14/238 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F   + + ++  +       P   +      L      + A+ +  R+   + ++    
Sbjct: 51  WFAGGLVLGSVPAYAAFAGFAPGPALASFIELLTSGEAWRAAAPSLARIGQGLAVAFGLG 110

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L         +L P   +++ I  L ++   V+ F           + A +F I 
Sbjct: 111 APLGLLVGSVPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +W + F+    +  +      ++R+           + VP  +  ++  + +++   
Sbjct: 163 AAAIWPILFATAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  +V +E + V        G+G  I  A        +   +L + G+ +  D  L R
Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGGIGYALDTGLGR 274


>gi|188494237|ref|ZP_03001507.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300916138|ref|ZP_07132905.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|188489436|gb|EDU64539.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300416557|gb|EFJ99867.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|332341730|gb|AEE55064.1| taurine transporter protein subunit TauC [Escherichia coli UMNK88]
          Length = 275

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     +RS   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|294495023|ref|YP_003541516.1| binding-protein-dependent transporters inner membrane component
           [Methanohalophilus mahii DSM 5219]
 gi|292666022|gb|ADE35871.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalophilus mahii DSM 5219]
          Length = 276

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +Y+  T   ++S+  ++L+       LAAKS  L  +L PILD+MQ++P   +L   V
Sbjct: 87  LWEYSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAV 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F     G V G     +F++  +            +  +P +L EV+ +F  + WQK 
Sbjct: 147 IFFGL---GNVPGMIATVVFSMPPA-----IRLTTLGITQVPTELVEVADAFGSTSWQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++  ++  +   +      VV + MI          G+G  + + I+  D+  
Sbjct: 199 IKVEIPVALKTIMAGVNQCIMLALSMVVIASMI-------GARGLGYQVLIGIQRVDIGL 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A L ++ +  + D+L
Sbjct: 252 GFEAGLGIVIIAIVLDRL 269



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T+  V+    +A II IP+GI       +   ++P   L+   P+ V+    V   
Sbjct: 90  YSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAVIFF 149

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
              ++   +   +     +    +     G +  P +  EVA +F  T W+    + +P 
Sbjct: 150 GLGNVPGMIATVVF----SMPPAIRLTTLGITQVPTELVEVADAFGSTSWQKLIKVEIPV 205

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G       A +  +++ +           GLG  +    ++          L 
Sbjct: 206 ALKTIMAGVNQCIMLALSMVVIASMIG-------ARGLGYQVLIGIQRVDIGLGFEAGLG 258

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 259 IVIIAIVLDRL 269


>gi|54023923|ref|YP_118165.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
 gi|54015431|dbj|BAD56801.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
          Length = 288

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +    IA  I +P+G+ I +   ++  + P  +L     A    P+ V  +    
Sbjct: 95  SLGRSLSGFAIALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIGE 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+++ + + IL N I G         + A+S  +   R ++ +ILP   P 
Sbjct: 155 TSK----VALVVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +    + +E+           GLG  I  + +    P +  G+L +   
Sbjct: 211 IFTGLRMAAASSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLL 264

Query: 566 VLALNRFL 573
            L+ N  L
Sbjct: 265 GLSFNGLL 272



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 93/257 (36%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72
           R    +F + AF+ +  +        +    P   V    + L     +  + S +  R 
Sbjct: 40  RGVKPLFAIAAFLAIWQLAPQAGLVDEVFLPPFTTVAEAFVDLVRSGEMWTHVSTSLGRS 99

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS   I+L          A  + +  +L PIL++ ++   L  L   V+           
Sbjct: 100 LSGFAIALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIG------ 153

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + +  +  +  + +  +    +  +   L + + S  L   + F  + +P ++P +
Sbjct: 154 --ETSKVALVVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPAI 211

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M+ +     ++A+EM+          G+G  I  A +   +  +   +L +  + 
Sbjct: 212 FTGLRMAAASSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLLG 265

Query: 253 FLYDQL---LFRPMIVW 266
             ++ L   L R    W
Sbjct: 266 LSFNGLLVALERRFSRW 282


>gi|254460294|ref|ZP_05073710.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206676883|gb|EDZ41370.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 657

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 74/544 (13%), Positives = 163/544 (29%), Gaps = 50/544 (9%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
              +R +PN+  +    +   +  +  + G  +      +V +      +    + A +T
Sbjct: 92  LFGKRRWPNLGPIPWTAIAASMAVLGYYLGGWKMAA---LVAVTFCWTALVGQWKIAMQT 148

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              ++ A   + +        A KS      L P+L ++Q++P   +L   V++F     
Sbjct: 149 MSVLVVAAPTAFIIGLSLGVAAWKSPAFNRALKPVLSVLQTLPFFTYLLPAVIFFKV--- 205

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G   GA    I+AI       M       L  +  ++ E       +  Q   ++ +P +
Sbjct: 206 GPTAGAVATTIYAIP-----PMILMTTLGLQKVSPEVVEAGHMSGCTKLQLLRHVYLPSA 260

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  +          ++    +VV    I +PG+G+ +   +    L       +T+
Sbjct: 261 RTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVTI 313

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER---------------------TTGIYPADSWVLY 287
           + +    D++    ++     F                                 S +  
Sbjct: 314 VLLAVTLDRMSKAWVVKQPEHFERGTPWWKRHIALLLGLGAFVVFCIVAQFIEVASEIGR 373

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
               +          W              R    ++   P     L        +L   
Sbjct: 374 KQSLSVGKELDTGIKWFLNIEWVKATTGFLRAFVNVQILIPFRNFMLSIPTPAFILLITA 433

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           +   + G    I       +V    + D         IT++ V+  + IA ++ +P+ I 
Sbjct: 434 FALWLGGRRQAITALIFFSLVALSGWWD------RSVITLYSVISAVSIAMLLGLPIAIL 487

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                  S ++         FP+ V+    +          ++ +   ++      ++  
Sbjct: 488 AARTEKWSQRLLLVCDTAQTFPSFVYLIPAIMLFGIT----DIAVIFSILIFAMVPLIRY 543

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G    P +  E A     T  +    + LP   P    G   A   A+   I++   
Sbjct: 544 TIEGLRTVPPEVIEAAEMSGATRMQKLVNVELPLALPTMAVGFNQAIMFAFFMVIIAAFI 603

Query: 528 SWGH 531
               
Sbjct: 604 GTQD 607



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 94/238 (39%), Gaps = 19/238 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF+L+I    + L G ++         +V ++         +  T   ++SA+ I++L  
Sbjct: 426 AFILLITAFALWLGGRRQAITALIFFSLVALS----GWWDRSVITLYSVISAVSIAMLLG 481

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A LAA++ +    L+ + D  Q+ P   +L   ++ F           ++A IF+I 
Sbjct: 482 LPIAILAARTEKWSQRLLLVCDTAQTFPSFVYLIPAIMLFGI--------TDIAVIFSIL 533

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +     + L  +P ++ E +     +  QK   + +P ++P +      ++   
Sbjct: 534 IFAMVPLIRYTIEGLRTVPPEVIEAAEMSGATRMQKLVNVELPLALPTMAVGFNQAIMFA 593

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +F V+ +  I   D       +G  +   +   DL       + +  +   +D  + +
Sbjct: 594 FFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKNFVLGICVSLMALTFDLTILK 644



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 81/265 (30%), Gaps = 15/265 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI----AWQSIGYI 367
                    G+++         L   +R   +  I W  +   +A+       W+    +
Sbjct: 70  LFALTRWLTGLLQTVLDTTANLLFGKRRWPNLGPIPWTAIAASMAVLGYYLGGWKMAALV 129

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F +  ++    +   TM  +VV    A II + +G+     P  +  ++P   +L  
Sbjct: 130 AVTFCWTALVGQWKIAMQTMSVLVVAAPTAFIIGLSLGVAAWKSPAFNRALKPVLSVLQT 189

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   FF  ++  V ++ + P        I+     ++     G      +  E      
Sbjct: 190 LP---FFTYLLPAVIFFKVGPTAGAVATTIY-AIPPMILMTTLGLQKVSPEVVEAGHMSG 245

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T  +  R++ LP      + G            +++             GLGA +    
Sbjct: 246 CTKLQLLRHVYLPSARTEILVGVNQVIMLCLAMVVLTAFIGM-------PGLGAKLLAMM 298

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
                       + +    + L+R 
Sbjct: 299 GSFKLGRSFEIGVTIVLLAVTLDRM 323


>gi|307314433|ref|ZP_07594038.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|306906001|gb|EFN36522.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|315061959|gb|ADT76286.1| glycine betaine transporter subunit [Escherichia coli W]
 gi|323377460|gb|ADX49728.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
          Length = 354

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGMATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGMATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|266622873|ref|ZP_06115808.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium hathewayi DSM 13479]
 gi|288865368|gb|EFC97666.1| putative aliphatic sulfonates transport permease protein SsuC
           [Clostridium hathewayi DSM 13479]
          Length = 262

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +LP +   +    L    + +LF      L A  + +   + P+ D+++ +P L ++
Sbjct: 60  DGATLPTHLMGSLKVALFGYSLGVLFGVPMGILMAWFKWVDRFVRPLFDLIRPVPGLAWI 119

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F            L     IF S       + Y  +    ++   V   F  S 
Sbjct: 120 PMFILLFGIGI--------LPKAAVIFLSTSVACIVNSYTGIKQTKQEHLWVGDVFGFSN 171

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            QK + + +P ++P +   + ++M   W  +VA+E++          G+G  I       
Sbjct: 172 LQKLYKIAIPTALPMIFTGLRVAMGAAWMALVAAELLASSV------GLGYMIQQGRYAS 225

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               +   M+ +  V  L+D +L
Sbjct: 226 KPALVFVGMIMIGIVGLLFDTIL 248



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   +    +  +  +P+GI + +   +   ++P   L+   P   + P+ +       
Sbjct: 71  SLKVALFGYSLGVLFGVPMGILMAWFKWVDRFVRPLFDLIRPVPGLAWIPMFILLFGIG- 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  + ++   T    + N   G      +   V   F  +  +    I +P   P 
Sbjct: 130 ---ILPKAAVIFLSTSVACIVNSYTGIKQTKQEHLWVGDVFGFSNLQKLYKIAIPTALPM 186

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A G AW A + +E+ +       + GLG  I +         V +G++++   
Sbjct: 187 IFTGLRVAMGAAWMALVAAELLA------SSVGLGYMIQQGRYASKPALVFVGMIMIGIV 240

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 241 GLLFDTIL 248


>gi|119386564|ref|YP_917619.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377159|gb|ABL71923.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 293

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +A + V+     L+    +  +   +  +V        + +   RT   +    +I+++
Sbjct: 59  WIAVLAVLAAGIWLVSRSWKIALGSVLALLVVGYF---GMWEDTMRTIAMVAVCTLIAVV 115

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L A+S R+  ++ PILD+MQ++P   +L   V+ F     GKV G     I+A
Sbjct: 116 LGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMIFGL---GKVPGLIAVVIYA 172

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I       +       +  +  D+ E + +F  S WQK   + +P ++P ++  +  ++ 
Sbjct: 173 IP-----PVIRLTNLGIRQVAPDVLEAAEAFGSSSWQKLRDVQLPLALPTIMAGINQTIM 227

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                VV + MI V        G+G  +  AI +Q     +   L ++ +  + D+
Sbjct: 228 MSLAMVVVASMIGV-------RGLGQPVLQAINQQYFTMGVMNGLAIVAIAIIMDR 276



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S  + +          +  +W+     V          +      T+  V V  +IA +
Sbjct: 56  RSPWIAVLAVLAAGIWLVSRSWKIALGSVLALLVVGYFGMWEDTMRTIAMVAVCTLIAVV 115

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVGI +     +++ + P   ++   P+ V+   VV           +   + ++  
Sbjct: 116 LGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMIFGLG----KVPGLIAVVIY 171

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F  + W+  R + LP   P  + G       +  
Sbjct: 172 AIPPVIRLTNLGIRQVAPDVLEAAEAFGSSSWQKLRDVQLPLALPTIMAGINQTIMMSLA 231

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +V+ +           GLG  + ++  +  F   V+  L +    + ++R
Sbjct: 232 MVVVASMIG-------VRGLGQPVLQAINQQYFTMGVMNGLAIVAIAIIMDR 276


>gi|116671661|ref|YP_832594.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611770|gb|ABK04494.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 321

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D++          SL +    +  R +   +IS++       L A+   L     P
Sbjct: 95  PGPLDVLGQFGTLWADGSLQEAVWTSLQRGIVGFLISVVIATPIGLLLAQVAPLRRAFGP 154

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +Q +P + ++   +++F           +    F +F   + ++   +   +  IP
Sbjct: 155 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVVFMGAIPSIINGLISGVDQIP 206

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V      +  Q    + +P ++PG +  +    +  W  ++A+E+I VG T+   
Sbjct: 207 PQYRSVGTVLGANRLQMALQIVLPAALPGYLSGLKQGWAFSWRSLMAAEIIAVGGTIG-- 264

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+GS +       D+  ++ A+L +L V  L + L+F P+
Sbjct: 265 FGLGSMLNQGRDLADMTIVMSAILLILAVGILIELLVFAPI 305



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 76/192 (39%), Gaps = 6/192 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +V  +I+ +I  P+G+ +     +     P    L   P+  + P  +       
Sbjct: 120 SLQRGIVGFLISVVIATPIGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  ++  G    I+  +I+G    P  ++ V +       +    I+LP   P 
Sbjct: 180 AT----VYFVVFMGAIPSIINGLISGVDQIPPQYRSVGTVLGANRLQMALQIVLPAALPG 235

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y++G       +W + + +E+ + G       GLG+ + +  +      V+  +L++   
Sbjct: 236 YLSGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSMLNQGRDLADMTIVMSAILLILAV 293

Query: 566 VLALNRFLWHPL 577
            + +   ++ P+
Sbjct: 294 GILIELLVFAPI 305


>gi|229488500|ref|ZP_04382366.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
 gi|229324004|gb|EEN89759.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
          Length = 290

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   FT  +   +      ++ R +    +A  I IP+GI I +   +S  + P  +L 
Sbjct: 79  VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 138

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
               A    P+ V  +     +       L+I+   + IL N I+G         + A+S
Sbjct: 139 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 194

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  R ++ ++LP   P   TG   A   +    I +E+           GLG  I  
Sbjct: 195 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 248

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           S      P +  G++ +    L +N     +   L  +
Sbjct: 249 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 286



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72
           RI      +  F+ +      L    +    P   V     TL +   L ++ S +  R 
Sbjct: 44  RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 103

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   +++          A  R +   L PIL++ ++   L  L   V+           
Sbjct: 104 LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 157

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  +  +  + +  +    +  +   L + + S   S  + F  + +P ++P +
Sbjct: 158 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 215

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M+ +     ++A+EM+          G+G  I  +     +  +   ++ +  + 
Sbjct: 216 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 269

Query: 253 FLYD---QLLFRPMIVW 266
              +    L+ R +  W
Sbjct: 270 LTINAILVLIERRLSRW 286


>gi|167577393|ref|ZP_02370267.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 283

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 13/255 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L   S     + L   +  V   +  G        +V      D   +      ++ 
Sbjct: 36  AAALATWSALVAGWWLAARFEWVSAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLA 95

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+     +A +  IP G+ I     +   + P  +     P   + PL+V        + 
Sbjct: 96  RIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLAYLPLMVVWFGIGDASK 155

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L + L M       +     AGAS         A+S   T  +  R+++LP   P  +T
Sbjct: 156 VLLIYLTMFA----PLAIATAAGASGVSESRLRAAASLGATRLKLLRHVVLPSALPDILT 211

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++    +A
Sbjct: 212 GVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGAIAIA 265

Query: 569 LN---RFLWHPLYLY 580
           L    R L   L  +
Sbjct: 266 LEIGLRALQRRLTPW 280



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L Q+   +  R+ +A  ++L+       L A +R +   + PI++  + IP L 
Sbjct: 80  GFDDATLGQHLLASLARIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F      KV+         I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  +   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRLKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIAIALEIGLRALQRRLTPW 280


>gi|110668537|ref|YP_658348.1| sulfonate ABC transporter permease [Haloquadratum walsbyi DSM
           16790]
 gi|109626284|emb|CAJ52742.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component; Sulfonate ABC transporter permease protein
           [Haloquadratum walsbyi DSM 16790]
          Length = 301

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   +  +++ S + + +G+ +G+   + + + P  + L   P   +    +  +   H
Sbjct: 112 SLLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGH 171

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504
                  + ++  G  W   +N  AG        KEVA+S  +       R +I+P   P
Sbjct: 172 GG----AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPAAMP 227

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG  T+ G  W   + +E+           G+G  I  + +  +    V  ++++  
Sbjct: 228 SITTGLRTSIGQCWMIVVAAELFG-------APGVGFQIINAAQNLATDVSVAYMVVISL 280

Query: 565 FVLALNRFLWH 575
             L  +     
Sbjct: 281 VFLVSDGVFRR 291



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 34/262 (12%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS---------------LPQYASRT 68
            FV +  +    +        P ++     I L   +               L    +++
Sbjct: 53  IFVTIWQVAAAAVDQTYLLPSPIEVATAFIIELTASATFTLPIAGITVPMTRLTANLAQS 112

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L  L  +V+              S RL   L P+   ++ IP L ++ F +V+    + 
Sbjct: 113 LLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGHG 172

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPF 187
           G        A F +     W   ++ Y  +  +   L+EV+ S  +         + +P 
Sbjct: 173 G--------AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPA 224

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   +  S+   W  VVA+E+          PG+G  I  A +       +  M+ 
Sbjct: 225 AMPSITTGLRTSIGQCWMIVVAAELF-------GAPGVGFQIINAAQNLATDVSVAYMVV 277

Query: 248 MLGVIFLYD---QLLFRPMIVW 266
           +  V  + D   + + R ++ W
Sbjct: 278 ISLVFLVSDGVFRRVERRLLEW 299


>gi|194433050|ref|ZP_03065333.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella dysenteriae 1012]
 gi|194418777|gb|EDX34863.1| glycine betaine/L-proline ABC transporter, permease protein
           [Shigella dysenteriae 1012]
 gi|332087399|gb|EGI92527.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella boydii 5216-82]
 gi|332088693|gb|EGI93806.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella dysenteriae 155-74]
          Length = 354

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 IIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IIIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|307321321|ref|ZP_07600721.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306893049|gb|EFN23835.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 281

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 25/265 (9%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383
           +L+       S++           +    +           +   +L  +W G       
Sbjct: 24  YLRRSGAAAGSWLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83

Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I++ R     + A ++ IP+G+ +G    I + + P  QL     A   +P+ +  
Sbjct: 84  DDIAISLQRSGTAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILL 143

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +     +       ++ + T + +L + I+G     +   E+A  +  +    +R ++LP
Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P    G   +   A    I SE+           G+G  +  +      P +   + 
Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585
           I+    L  N  L     ++  R L
Sbjct: 254 ILAGLGLVSNYAL-----VFAQRRL 273



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73
           + + + LL   L +         I     P    I+  +   +   +L    + +  R  
Sbjct: 35  WLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSG 94

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A V +++       L  + R +   L P+L + +    L      ++            
Sbjct: 95  TAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + +F IF + ++ +  S    +  +   L E++R +  S    F  + +P ++P + 
Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +     ++ASEMI          GIG  +  A     +  +  A+  + G+  
Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260

Query: 254 LYDQLLF---RPMIVWSN 268
           + +  L    R +  WS+
Sbjct: 261 VSNYALVFAQRRLCRWSD 278


>gi|126464362|ref|YP_001045475.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126106173|gb|ABN78703.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 377

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 9/201 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++ R ++   +A  + +P+G  +G        + P   L+   PA  +
Sbjct: 164 GDRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWMSPILSLMLPLPAVAW 223

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++       L     + ++   G  + +L++ + G  A       V  S   +    
Sbjct: 224 TPILLVVFGPGDLT----IVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSRLDV 279

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +++P   P  +TG       +W   + +E+ +       T+GLG  I  +       
Sbjct: 280 LRRVLIPASLPALITGFKLCMAHSWRTLVAAEMLA-----ALTSGLGYMIFSARSYMDVS 334

Query: 554 EVVLGVLIMCCFVLALNRFLW 574
            + +GV+ +    +A+   L+
Sbjct: 335 TMFVGVVCLAAIGMAIEHLLF 355



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  +   +  R L A  +++        L   SR   + + PIL +M  +P + + 
Sbjct: 165 DRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWMSPILSLMLPLPAVAWT 224

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V F           +L  +   F   V+ + +S  Q +         V RS   S 
Sbjct: 225 PILLVVFGPG--------DLTIVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSR 276

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P S+P L+    + M+  W  +VA+EM+    +     G+G  I  A    
Sbjct: 277 LDVLRRVLIPASLPALITGFKLCMAHSWRTLVAAEMLAALTS-----GLGYMIFSARSYM 331

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
           D+  +   ++ +  +    + LLF
Sbjct: 332 DVSTMFVGVVCLAAIGMAIEHLLF 355


>gi|319761857|ref|YP_004125794.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|330826291|ref|YP_004389594.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317116418|gb|ADU98906.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|329311663|gb|AEB86078.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 370

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 96/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ +I++L        +       + + + +   P  A  T   +L++++  ++    
Sbjct: 123 PVMLLLISLLAWQFAGRMLALATAVSLGVVVLLGIWPD-AMVTLALVLTSLLFCVVLGLP 181

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + A S R      P+LD MQ+ P   +L   V+ F     G V G  +  +FA    
Sbjct: 182 LGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIVFA---- 234

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       L  +  DL E SR++  S WQ  W + +P ++P ++  +  ++     
Sbjct: 235 -LPPLVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQLPLALPSIMAGINQALMLSLS 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       L ++ +  + D++
Sbjct: 294 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAVVLDRI 339



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 90/254 (35%), Gaps = 16/254 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
            F          +   V+  L    + V+  +   +AWQ  G ++   T   +  V+ LG
Sbjct: 97  PFFQSVRAPIDATLSGVTDALLALPWPVMLLLISLLAWQFAGRMLALATAVSLGVVVLLG 156

Query: 384 C-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 +T+  V+  ++   ++ +P+GI +          +P    +   PA V+   VV
Sbjct: 157 IWPDAMVTLALVLTSLLFCVVLGLPLGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVV 216

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N+   ++ I      ++     G      D  E + ++  + W+    + 
Sbjct: 217 MLFGIG----NVPGVIVTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQ 272

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G   A   + +  +++ + + G       GLG  +     +       +G
Sbjct: 273 LPLALPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIG 325

Query: 559 VLIMCCFVLALNRF 572
            L +    + L+R 
Sbjct: 326 GLGIVLLAVVLDRI 339


>gi|221370082|ref|YP_002521178.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221163134|gb|ACM04105.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 276

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 9/188 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R++  + +A ++   +G+ IG      +  +P    +   P   + P+++     
Sbjct: 78  ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLVFGI 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N     ++     + I++NV+ G          VA+S   +  +  RY+I+PGI 
Sbjct: 138 ----DNRTTITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGIL 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY +TG     G AW A I +E+ +       + GLG  I ++ E      +  G+L + 
Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLA-----ASSHGLGFMIYDAQEYMDMKSIYGGILTIS 248

Query: 564 CFVLALNR 571
              L + R
Sbjct: 249 VLGLLIER 256



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 91/239 (38%), Gaps = 13/239 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F L       G I+  L       +    V   P     +      + +  R+L+ + +
Sbjct: 31  LFGLWEIAARTGTISAFLFPPPTAILASLWVSAGPNGDPPYGTLLDIALSLYRLLAGVGL 90

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+   +       +R    +  PI+  +  IP L +    ++ F               
Sbjct: 91  ALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLVFGIDNR--------TT 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +F +  + + +++   +  + R    V+ S   S  Q   Y+ +P  +P L+  + +
Sbjct: 143 ITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGILPYLITGLKL 202

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +   W  ++A+EM+          G+G  I  A +  D+ +I   +LT+  +  L ++
Sbjct: 203 GVGYAWRALIAAEMLAASSH-----GLGFMIYDAQEYMDMKSIYGGILTISVLGLLIER 256


>gi|33594811|ref|NP_882454.1| ABC transport system permease protein [Bordetella parapertussis
           12822]
 gi|33599083|ref|NP_886643.1| ABC transport system permease protein [Bordetella bronchiseptica
           RB50]
 gi|33564887|emb|CAE39832.1| ABC transport system permease protein [Bordetella parapertussis]
 gi|33575129|emb|CAE30592.1| ABC transport system permease protein [Bordetella bronchiseptica
           RB50]
          Length = 256

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     +  RV+V    A+ + IP+GI++G      +   P    L   P+  +
Sbjct: 55  WEQGSLLDHIVASARRVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSW 114

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +                ++  GT    L  VI             A +   +G + 
Sbjct: 115 IPLSLLWFGITETQKYS----IVFMGTFAPALLYVIEATRNIDPLLIRAARNLGASGPQV 170

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +ILP   P   +G     G +W   I +E+ +         GLG  I    E     
Sbjct: 171 MRSVILPASLPQIFSGFKVILGLSWTCVISAELVA------AKEGLGFLIMNGKEFFQTD 224

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            VVLG+ ++   VL  +   
Sbjct: 225 TVVLGMALISVTVLVTDVVF 244



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 88/249 (35%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +    +  +          P D+   +    +  SL  +   +  R++     +  
Sbjct: 21  IVLLLFWEAVCRLQWVDALFLPPPSDVFARMGNMWEQGSLLDHIVASARRVMVGFAAATA 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+R      PIL  ++ +P + ++  ++++F      K           
Sbjct: 81  LAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPLSLLWFGITETQKYS--------I 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F          + ++  NI   L   +R+   SG Q    + +P S+P +     + + 
Sbjct: 133 VFMGTFAPALLYVIEATRNIDPLLIRAARNLGASGPQVMRSVILPASLPQIFSGFKVILG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  V+++E++   +      G+G  I    +      ++  M  +   + + D   ++
Sbjct: 193 LSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLVTDVVFRI 246

Query: 259 LFRPMIVWS 267
           +   ++ WS
Sbjct: 247 IENRVLAWS 255


>gi|117621146|ref|YP_857442.1| taurine transporter subunit [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562553|gb|ABK39501.1| taurine uptake ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 276

 Score =  120 bits (301), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 15/277 (5%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           LS  +    R               L     ++    +    ++  + +    Q +    
Sbjct: 5   LSRPLDPARRIRLRWPLPRRLGVSLLTLGALLALWWLVARLGLISPLFLPPPAQVLQQFA 64

Query: 369 NHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                Q  +          ++ R+++ +  A++  + VG+ +G  P +   + P  +L  
Sbjct: 65  TLAGPQGFMDATLWQHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYR 124

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   + PL+V        +      LL+       +    +AG           A + 
Sbjct: 125 PVPPLAYLPLMVIWFGIGETSK----VLLIYLAIFAPVAMATLAGVQGAKQVRLRAARAL 180

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+   Y+I+PG  P  +TG     G  W+  + +E+ +       T G+G  +  +
Sbjct: 181 GANRWQVLWYVIVPGALPDMLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAA 234

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            E  +   V+ G+L++      L    R L   L  +
Sbjct: 235 GEFLATDVVLAGILVIALIAFTLELGLRALQRRLTPW 271



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+ + +  R+L A+  + L           S  L  +L P++++ + +P 
Sbjct: 69  PQGFMDATLWQHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPP 128

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F      KV+   LA    +  +     T +  Q    +       +R+ 
Sbjct: 129 LAYLPLMVIWFGIGETSKVLLIYLAIFAPVAMA-----TLAGVQGAKQVR---LRAARAL 180

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + WQ  WY+ VP ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 181 GANRWQVLWYVIVPGALPDMLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAA 234

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  +L +  + F  +   + L R +  W 
Sbjct: 235 GEFLATDVVLAGILVIALIAFTLELGLRALQRRLTPWH 272


>gi|16130592|ref|NP_417164.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109471|ref|AP_003251.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|157162129|ref|YP_001459447.1| glycine betaine transporter membrane protein [Escherichia coli HS]
 gi|170019070|ref|YP_001724024.1| glycine betaine transporter membrane protein [Escherichia coli ATCC
           8739]
 gi|170082263|ref|YP_001731583.1| glycine betaine ABC transporter membrane protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188496143|ref|ZP_03003413.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 53638]
 gi|194439438|ref|ZP_03071514.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 101-1]
 gi|238901822|ref|YP_002927618.1| glycine betaine transporter subunit [Escherichia coli BW2952]
 gi|253772461|ref|YP_003035292.1| glycine betaine transporter membrane protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037720|ref|ZP_04871778.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43]
 gi|254162615|ref|YP_003045723.1| glycine betaine transporter membrane protein [Escherichia coli B
           str. REL606]
 gi|256024810|ref|ZP_05438675.1| glycine betaine transporter membrane protein [Escherichia sp.
           4_1_40B]
 gi|293415929|ref|ZP_06658569.1| glycine betaine transporter membrane protein [Escherichia coli
           B185]
 gi|297517416|ref|ZP_06935802.1| glycine betaine transporter membrane protein [Escherichia coli
           OP50]
 gi|300930531|ref|ZP_07145927.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300949074|ref|ZP_07163121.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957449|ref|ZP_07169662.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301026688|ref|ZP_07190099.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301645343|ref|ZP_07245290.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307139370|ref|ZP_07498726.1| glycine betaine transporter membrane protein [Escherichia coli
           H736]
 gi|312973111|ref|ZP_07787284.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1827-70]
 gi|331643366|ref|ZP_08344497.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H736]
 gi|130992|sp|P14176|PROW_ECOLI RecName: Full=Glycine betaine/L-proline transport system permease
           protein proW
 gi|147374|gb|AAA24428.1| proW peptide [Escherichia coli]
 gi|1789033|gb|AAC75725.1| glycine betaine transporter subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|1800066|dbj|BAA16543.1| glycine betaine transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|157067809|gb|ABV07064.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli HS]
 gi|169753998|gb|ACA76697.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169890098|gb|ACB03805.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188491342|gb|EDU66445.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 53638]
 gi|194421614|gb|EDX37625.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 101-1]
 gi|226839344|gb|EEH71365.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43]
 gi|238861367|gb|ACR63365.1| glycine betaine transporter subunit [Escherichia coli BW2952]
 gi|242378240|emb|CAQ33015.1| proW, subunit of proline ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323505|gb|ACT28107.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974516|gb|ACT40187.1| glycine betaine transporter subunit [Escherichia coli B str.
           REL606]
 gi|253978683|gb|ACT44353.1| glycine betaine transporter subunit [Escherichia coli BL21(DE3)]
 gi|260448264|gb|ACX38686.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|291432118|gb|EFF05100.1| glycine betaine transporter membrane protein [Escherichia coli
           B185]
 gi|299879610|gb|EFI87821.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300315805|gb|EFJ65589.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300451460|gb|EFK15080.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300461587|gb|EFK25080.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|301076377|gb|EFK91183.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309703043|emb|CBJ02375.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli ETEC H10407]
 gi|310333053|gb|EFQ00267.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 1827-70]
 gi|315137291|dbj|BAJ44450.1| glycine betaine transporter membrane protein [Escherichia coli DH1]
 gi|315615065|gb|EFU95702.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 3431]
 gi|323935628|gb|EGB31945.1| inner membrane transport system [Escherichia coli E1520]
 gi|323941486|gb|EGB37669.1| inner membrane transport system [Escherichia coli E482]
 gi|323960576|gb|EGB56203.1| inner membrane transport system [Escherichia coli H489]
 gi|323971477|gb|EGB66712.1| inner membrane transport system [Escherichia coli TA007]
 gi|331036837|gb|EGI09061.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H736]
 gi|332344560|gb|AEE57894.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli UMNK88]
          Length = 354

 Score =  120 bits (301), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|260769404|ref|ZP_05878337.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
 gi|260614742|gb|EEX39928.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
          Length = 368

 Score =  120 bits (301), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 19/235 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +L++ +I   L G +        + ++ +          A  T   +++++   LL  
Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQ----AMVTLALVMTSVFFCLLIG 164

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A+S     ++ PILD MQ+ P   +L   V+ F     G V G  +  IFA  
Sbjct: 165 MPLGIWLARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 219

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +P +L E   +F  S  Q  + + +P +MP ++  +  ++   
Sbjct: 220 ---LPPIVRLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLS 276

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 277 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 85/227 (37%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  +   IAWQ  G  +   ++  ++ +  +G      +T+  V+  +    +I +P+G
Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQAMVTLALVMTSVFFCLLIGMPLG 168

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  ++P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 169 IWLARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 224

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P +  E   +F  +  +    I LP   P  + G       + +  +++ 
Sbjct: 225 RLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLSMVVIAS 284

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 285 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324


>gi|300922748|ref|ZP_07138837.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300420933|gb|EFK04244.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
          Length = 354

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|74313249|ref|YP_311668.1| glycine betaine transporter membrane protein [Shigella sonnei
           Ss046]
 gi|73856726|gb|AAZ89433.1| high-affinity transport system for glycine betaine and proline
           [Shigella sonnei Ss046]
 gi|323167147|gb|EFZ52865.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella sonnei 53G]
          Length = 354

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +  +   +    P           
Sbjct: 63  PLDSWV------TEGIDWVVTHFRPVFQGVRVPVDYILNSFQQLLLGMPAPV-------- 108

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    +    V+  ++   +
Sbjct: 109 ---AIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIV 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|311107092|ref|YP_003979945.1| binding-protein-dependent transporter inner membrane component
           family protein 47 [Achromobacter xylosoxidans A8]
 gi|310761781|gb|ADP17230.1| binding-protein-dependent transport system inner membrane component
           family protein 47 [Achromobacter xylosoxidans A8]
          Length = 283

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L  +   +  R+L                    R L   ++P  + +  IP+L +L
Sbjct: 70  SSGDLWLHVQASMQRVLVGFAAGSALGLALGAAMGLWRPLEAYILPTFNALVQIPVLAWL 129

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F ++      P K I         I  + +  +T +  Q     P +L EV+R +  + 
Sbjct: 130 PFVLLLVGIGEPLKYI--------LIAKAALVPVTLNTLQGFRQTPSNLLEVARVYGYTR 181

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+   + +P ++P L   + +  +  W  +V  E++   +      G+G  I    +  
Sbjct: 182 RQQVLEVVLPHALPTLFTGLRLGFTKAWLSLVVVELVASSE------GLGYLIVYGRQLF 235

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  ++ A+L +  + +  D+LL
Sbjct: 236 QLDLVMAAVLVVGAIGYAIDKLL 258



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +M RV+V     S + + +G  +G    + + I P    L   P   + P V+  V   
Sbjct: 80  ASMQRVLVGFAAGSALGLALGAAMGLWRPLEAYILPTFNALVQIPVLAWLPFVLLLVGIG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L+       +  N + G    P++  EVA  +  T  +    ++LP   P
Sbjct: 140 ----EPLKYILIAKAALVPVTLNTLQGFRQTPSNLLEVARVYGYTRRQQVLEVVLPHALP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       AW + +V E+ +       + GLG  I    +      V+  VL++  
Sbjct: 196 TLFTGLRLGFTKAWLSLVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAVLVVGA 249

Query: 565 FVLALNRFL 573
              A+++ L
Sbjct: 250 IGYAIDKLL 258


>gi|13471315|ref|NP_102884.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14022060|dbj|BAB48670.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 259

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 23/237 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CITMFRVVVL 393
                        AW ++G  VN     D L ++  G              IT++RV   
Sbjct: 17  LGISFFVLFIAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGG 76

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            ++AS++ +P+GI +G    + + ++PF       PA+ F PL++       L       
Sbjct: 77  FVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELEK----L 132

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L++  G+ + I+  V     +   D  E A +   T     + +I+P   P         
Sbjct: 133 LVIFVGSVFQIILIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLV 192

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            G AW   IV+E+         ++G+G  I  S  + +  +++ G++++    L  +
Sbjct: 193 LGWAWTYVIVAELIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSD 243



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+    V++ +            + +   L P +   + +P   F+   +++     
Sbjct: 69  TIWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG- 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL  +  IF   V+ +   +   + +  RDL E + +   +       + +P 
Sbjct: 128 -------ELEKLLVIFVGSVFQIILIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPA 180

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + + +   W +V+ +E+I          GIG  I  +        I++ ++ 
Sbjct: 181 NAPEIAETLRLVLGWAWTYVIVAELIGSSS------GIGYMIINSQSRLATGQIIFGIIV 234

Query: 248 MLGVIFLYDQLLFRPMIVW 266
           +  +  L D   F+    W
Sbjct: 235 IGLIGLLSD-FAFKAFNRW 252


>gi|251789284|ref|YP_003004005.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247537905|gb|ACT06526.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 263

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 18/253 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84
           V V  + +               + +    L     L Q+ S +T R L+   I      
Sbjct: 22  VAVWQLASSAGWLSSRILPSPQAITVTFWRLTRSGELWQHLSISTWRALTGFAIGGALGL 81

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +   SR    +L   + +++++P L  +   +++F           E A IF +  
Sbjct: 82  ALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ESAKIFLVAL 133

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  + Y  + NI   L E++RS+ LSG++ F  + +P ++P ++  +  S+   W
Sbjct: 134 GTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGALPSIMVGVRFSLGLMW 193

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFR 261
             ++ +E I          GIG     A +      ++ A++    +  L D +   L R
Sbjct: 194 LTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVIALTLER 247

Query: 262 PMIVWSNKFRLER 274
             + W   ++L  
Sbjct: 248 IWLRWHPSWQLTE 260



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +R +    I   + + +G   G        +    Q+L   P     PLV+      
Sbjct: 64  ISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGI- 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT + I  N   G         E+A S+ ++G+R +R ++LPG  P
Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGALP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G  W   IV+E  S       ++G+G     + E      VV+ +++   
Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 565 FVLALNRF 572
                +  
Sbjct: 234 LGKLADVI 241


>gi|315181935|gb|ADT88848.1| glycine betaine/L-proline transport system permease [Vibrio
           furnissii NCTC 11218]
          Length = 368

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 19/235 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +L++ +I   L G +        + ++ +          A  T   +++++   LL  
Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQ----AMVTLALVMTSVFFCLLIG 164

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA  
Sbjct: 165 MPLGIWLARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 219

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +P +L E   +F  S  Q  + + +P +MP ++  +  ++   
Sbjct: 220 ---LPPIVRLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLS 276

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 277 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 85/227 (37%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  +   IAWQ  G  +   ++  ++ +  +G      +T+  V+  +    +I +P+G
Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQAMVTLALVMTSVFFCLLIGMPLG 168

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  ++P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 169 IWLARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 224

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P +  E   +F  +  +    I LP   P  + G       + +  +++ 
Sbjct: 225 RLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLSMVVIAS 284

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 285 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324


>gi|226308141|ref|YP_002768101.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226187258|dbj|BAH35362.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 281

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   FT  +   +      ++ R +    +A  I IP+GI I +   +S  + P  +L 
Sbjct: 70  VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 129

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
               A    P+ V  +     +       L+I+   + IL N I+G         + A+S
Sbjct: 130 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 185

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  R ++ ++LP   P   TG   A   +    I +E+           GLG  I  
Sbjct: 186 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 239

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           S      P +  G++ +    L +N     +   L  +
Sbjct: 240 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 277



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72
           RI      +  F+ +      L    +    P   V     TL +   L ++ S +  R 
Sbjct: 35  RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 94

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   +++          A  R +   L PIL++ ++   L  L   V+           
Sbjct: 95  LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  +  +  + +  +    +  +   L + + S   S  + F  + +P ++P +
Sbjct: 149 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 206

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M+ +     ++A+EM+          G+G  I  +     +  +   ++ +  + 
Sbjct: 207 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 260

Query: 253 FLYD---QLLFRPMIVW 266
              +    L+ R +  W
Sbjct: 261 LTINAILVLIERRLSRW 277


>gi|154247387|ref|YP_001418345.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161472|gb|ABS68688.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 283

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 19/271 (7%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           S+ ++      G +    P     L   +R + +  I  F ++       A + I  +  
Sbjct: 5   SDTIEAAAVEAGTVDRPAPRFAGGLFGARRPNLIGFILPFAILVLWQTAAANRWIDPVFL 64

Query: 370 HFTYQDVL---------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                 V          ++      ++  V    +  S+  I +GI  G    +     P
Sbjct: 65  PAPITVVTAFWKMLTKQHLALDFLASIKIVGQAFLYGSVAAIVLGIAAGLSRKVEQFFGP 124

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               +   P   + PL+V  +            L++     + +  N + G      ++ 
Sbjct: 125 TFDTIRHIPGIAWLPLIVLWLGIGA----PAKVLVIAKSVFFPVFLNTLQGIRNVEKNYI 180

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E+A    +T W+  R +ILP   P  +     A G AW   +V+E  S         GLG
Sbjct: 181 ELAKVLTLTRWQLVRKVILPAAMPSIMVSLRYAAGLAWALVVVAEGLSG------LEGLG 234

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             I  +       ++++ ++I+     A++R
Sbjct: 235 FLIFRAQGLLLTDQLLVCMVIIGLVGFAIDR 265



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 21/257 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHS 60
           P F          +L+ F+L   I+ +                 P  +V      L    
Sbjct: 23  PRFAGGLFGARRPNLIGFILPFAILVLWQTAAANRWIDPVFLPAPITVVTAFWKMLTKQH 82

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +   +  A +   +   V    A  SR++     P  D ++ IP + +L   V
Sbjct: 83  LALDFLASIKIVGQAFLYGSVAAIVLGIAAGLSRKVEQFFGPTFDTIRHIPGIAWLPLIV 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++     P KV+    +  F +F         +  Q + N+ ++  E+++   L+ WQ  
Sbjct: 143 LWLGIGAPAKVLVIAKSVFFPVF--------LNTLQGIRNVEKNYIELAKVLTLTRWQLV 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +MP ++ ++  +    W  VV +E +        L G+G  I  A        
Sbjct: 195 RKVILPAAMPSIMVSLRYAAGLAWALVVVAEGLSG------LEGLGFLIFRAQGLLLTDQ 248

Query: 241 ILYAMLTMLGVIFLYDQ 257
           +L  M+ +  V F  D+
Sbjct: 249 LLVCMVIIGLVGFAIDR 265


>gi|271500181|ref|YP_003333206.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270343736|gb|ACZ76501.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 263

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ I       +    L Q+ S +T R L+   I      V   +   SR    +L 
Sbjct: 39  LPSPQAITHTFWRLIRSGELWQHLSISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  +  I
Sbjct: 99  TSMQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRTI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LSG++ F  + +P ++P ++  +  S+   W  ++ +E I        
Sbjct: 151 DSGLLEMARSYGLSGFRLFREVVLPGALPSIMVGVRFSLGLMWLTLIVAETISASS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++ A++    +  L D +   L R  + W   ++
Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADIIALTLERLWLRWHPSWQ 257



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +R +    I   + + +G   G        +    Q+L   P     PLV+      
Sbjct: 64  ISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVILWFGI- 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT + I  N   G     +   E+A S+ ++G+R +R ++LPG  P
Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRTIDSGLLEMARSYGLSGFRLFREVVLPGALP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G  W   IV+E  S       ++G+G     + E      VV+ +++   
Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 565 FV-------LALNRFLWH 575
                    L L R    
Sbjct: 234 LGKLADIIALTLERLWLR 251


>gi|171316280|ref|ZP_02905502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171098602|gb|EDT43401.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 295

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L A   +  ++ ++   +    +   I V +  + +    L      T   + +A   S
Sbjct: 42  GLAAVPFIAMVVILVGLALWRRGIVFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A++ R+GM+L  +LD MQ++P   +L   V+ F            + A+
Sbjct: 102 LVIGVPLGIWGARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +  +       +  +  +L E  RSF  + WQ  W + +P ++P ++  +  +
Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G Y+   I+  D+       L ++ +  + D+L
Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F  +  + +G+A    G + + F    +L + ++G       T+  V      +
Sbjct: 42  GLAAVPFIAMVVILVGLALWRRGIVFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW      I   ++     +   PA V+    V       +   +   +   
Sbjct: 102 LVIGVPLGIWGARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   SF  T W+    I LP   P  + G       A
Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ +   G       GLG Y+    ++        G L +    + L+R 
Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265


>gi|323173039|gb|EFZ58670.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli LT-68]
          Length = 354

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 ALP-----PVIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPVIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|162451650|ref|YP_001614017.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161162232|emb|CAN93537.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 281

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 91/281 (32%), Gaps = 13/281 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P     +   R L + R       L L +   ++ +    W     GV   +A      
Sbjct: 9   APPRQCERPPPRWLALGRPASARVRLALGAASFLATLAAYAWLAGRDGVNTALAPTLASI 68

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       +      +  RV    + A+++ +P+G+  G    I++ I+P  + L 
Sbjct: 69  GRATAEALGSAELWLDVRYSFLRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEFLR 128

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PLV+               LL+  GT + +L          P    +V+ S 
Sbjct: 129 YVPVPALIPLVMIAAGIGEG----AKVLLVFLGTFFQLLLMTADEVRRVPAPLLQVSQSL 184

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T       ++ P   P   +      G AW+  +V+E+ +       T GLG  +   
Sbjct: 185 GATRREIVWRVLAPAALPGIWSALRMCNGWAWSYVVVAELVA------ATEGLGFRVLRF 238

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584
                 P +   + ++    L L+         L+ +    
Sbjct: 239 YRFIQTPSIYAYLAVLGAIGLGLDWAFGAAHRRLFRWARGR 279



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 17/224 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            I       L    L      + LR+ +  V + L       LA   R +  ++ P  + 
Sbjct: 67  SIGRATAEALGSAELWLDVRYSFLRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEF 126

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ +P+   +   ++             E A +  +F    + +       +  +P  L 
Sbjct: 127 LRYVPVPALIPLVMIAAGIG--------EGAKVLLVFLGTFFQLLLMTADEVRRVPAPLL 178

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           +VS+S   +  +  W +  P ++PG+   + M     W +VV +E++   +      G+G
Sbjct: 179 QVSQSLGATRREIVWRVLAPAALPGIWSALRMCNGWAWSYVVVAELVAATE------GLG 232

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
             +    +     +I   +  +  +    D       R +  W+
Sbjct: 233 FRVLRFYRFIQTPSIYAYLAVLGAIGLGLDWAFGAAHRRLFRWA 276


>gi|120404386|ref|YP_954215.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119957204|gb|ABM14209.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
          Length = 271

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 92/268 (34%), Gaps = 27/268 (10%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG-----VAIGIAWQSIGYIVNHFTYQDVL 377
            R   P   L   ++ RV    D  W  +        +A+     ++G I         L
Sbjct: 2   TRPADPTAPLAQANSGRVGRRADRRWALIRLASPFILLAVWQLGSAVGLIPQDVLPAPSL 61

Query: 378 ------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                        ++    ++  RVV  +I+  +I I +G  +G      + + P  Q++
Sbjct: 62  IAEAGIELIGNGQLVDALTVSGLRVVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMV 121

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P     PL +       L       LL+  G  + +  N  +          E A  
Sbjct: 122 RALPHLGLIPLFIIWFGIGEL----PKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQV 177

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              + W+ +R II+P   P  + G   +   AW   IV+E  +         G+G  I  
Sbjct: 178 LGFSFWQRFRSIIVPSAAPQVLVGLRQSLAIAWLTLIVAEQINADK------GIGFLIMN 231

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +      ++ G+++     +  +  +
Sbjct: 232 ARDFLRIDIIIFGLIVYALLGIGTDAVV 259



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 103/260 (39%), Gaps = 22/260 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-------SLPQYASRTTLR 71
            + L+       ++ +   G     +P+D++    +  +          L    + + LR
Sbjct: 26  RWALIRLASPFILLAVWQLGSAVGLIPQDVLPAPSLIAEAGIELIGNGQLVDALTVSGLR 85

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++  +++  +      T    S+     + P + +++++P LG +   +++F        
Sbjct: 86  VVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMVRALPHLGLIPLFIIWFGIG----- 140

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              EL  +  +     + +  + + ++  +   L E ++    S WQ+F  + VP + P 
Sbjct: 141 ---ELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRSIIVPSAAPQ 197

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S++  W  ++ +E I          GIG  I  A     +  I++ ++    +
Sbjct: 198 VLVGLRQSLAIAWLTLIVAEQI------NADKGIGFLIMNARDFLRIDIIIFGLIVYALL 251

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
               D ++ R +   + ++R
Sbjct: 252 GIGTDAVV-RALERRALRYR 270


>gi|291483332|dbj|BAI84407.1| aliphatic sulfonate ABC transporter, permease [Bacillus subtilis
           subsp. natto BEST195]
          Length = 276

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 16/277 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L +T        P           +   + I  + V+ G+ I  A      +  
Sbjct: 4   AEAAGSLPKTNAEAVRKKPGRKRYGFMKGLLLPAVIIAIWQVIGGLGIVSATVLPTPVTI 63

Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             T++++     +     I+++R  +  ++ + + + +GI  GF       + P  Q+L 
Sbjct: 64  VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 123

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +    +      +   LL+  G  + +  N   G         EVA   
Sbjct: 124 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 179

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                +    +ILP   P  + G   + G AW   +V+E+         + G+G  I ++
Sbjct: 180 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSAGVGYMIMDA 233

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +     +V  G++I        +   R L   L  +
Sbjct: 234 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 270



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              + +  +I  L +        P  IV      +    L  +   +  R     ++   
Sbjct: 37  AVIIAIWQVIGGLGIVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  S+R  + L P L +++++P L      +++F      K++   L A F 
Sbjct: 97  LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L EV+R       Q+   + +P ++P ++  + +S+ 
Sbjct: 157 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          G+G  I  A +      +   ++    V  L D   +L
Sbjct: 209 IAWLGLVVAELMGSSA------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 262

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 263 LERKLLKWRNSYE 275


>gi|152988369|ref|YP_001347068.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963527|gb|ABR85552.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 262

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 105/267 (39%), Gaps = 17/267 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++ R+ P    L+   +    +       +    P  +++     L    + Q+ + + 
Sbjct: 6   RLAERLAPWALPLVLLAVWQAAVAFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R     +I      V   +   S+     L   + +++++P L  +   +++F      
Sbjct: 66  WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +    ++ +  + Y  +  I   L E++RS+ LSG+  F  + +P ++
Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I  G       GIG     A +      ++ A+L   
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISAGS------GIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273
            +  L D   + L R  + W   ++++
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258



 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           +R++          V   A+   W S   +       +  + +           I+ +R 
Sbjct: 9   ERLAPWALPLVLLAVWQAAVAFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 69  AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S G      +G+G     + E      VVL +L+        +
Sbjct: 185 RFALGFMWLTLIVAETISAG------SGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238


>gi|221200703|ref|ZP_03573744.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2M]
 gi|221206899|ref|ZP_03579910.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2]
 gi|221172973|gb|EEE05409.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2]
 gi|221179275|gb|EEE11681.1| glycine betaine transport system permease protein opuAB
           [Burkholderia multivorans CGD2M]
          Length = 295

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L A   +  ++ ++   +    +   + V +    +    L      T   + +A   S
Sbjct: 42  GLAAVPFIAMVVILVGVALWRRGIVFSVFVGLALFVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A++ R+GM+L  +LD MQ++P   +L   V+ F            + A+
Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +  +       +  +  +L E  RSF  + WQ  W + +P ++P ++  +  +
Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G Y+   I+  D+       L ++ +  + D+L
Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F  +  + +G+A    G + + F    +  + ++G       T+  V      +
Sbjct: 42  GLAAVPFIAMVVILVGVALWRRGIVFSVFVGLALFVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW      I   ++     +   PA V+    V       +   +   +   
Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   SF  T W+    I LP   P  + G       A
Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ +   G       GLG Y+    ++        G L +    + L+R 
Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265


>gi|254392834|ref|ZP_05008004.1| glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294811675|ref|ZP_06770318.1| Glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326440141|ref|ZP_08214875.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces clavuligerus ATCC
           27064]
 gi|197706491|gb|EDY52303.1| glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294324274|gb|EFG05917.1| Glycine betaine ABC transport system permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 598

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 96/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++           + + +D   L   A  T   +L + + +L+    
Sbjct: 49  LLLAGILAVLAWWLRGLLAGVLSFAGLAL-IDSVELWGEAMATLSLVLVSTLSTLVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+SRR+  V+ P+LD MQ++P + +L   +++F     G V G     IFA+   
Sbjct: 108 LGVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFALPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPRDTLLRVQLPLAVPTIMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVILAMYLDRI 265



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 9/180 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            ++ G+   +AW   G +    ++      D + +      T+  V+V  +   +I +P+
Sbjct: 49  LLLAGILAVLAWWLRGLLAGVLSFAGLALIDSVELWGEAMATLSLVLVSTLSTLVIAVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+W      +S+ ++P    +   PA V+    +       +   +   +          
Sbjct: 109 GVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----ALPPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 165 VRMTELGIRQVDGELVEAAEAFGTTPRDTLLRVQLPLAVPTIMAGVNQVIMLGLSMVVIA 224


>gi|170740515|ref|YP_001769170.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168194789|gb|ACA16736.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 257

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RV+   ++AS + +P+GI +G    + + ++PF       PA+ F PL++     
Sbjct: 65  GMTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFVSFARYLPASAFVPLLILWAGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       L++  G+ + I+  V     A   D  E A +         R +++P   
Sbjct: 125 GEMQK----LLVIFIGSVFQIVLMVAVAVGAVRRDLVEAAYTLGAGDSGIIRRVLIPATA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P          G AW   IV+E+         ++G+G  I ES    +  +++ G++++ 
Sbjct: 181 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234

Query: 564 CFVLALNRFL 573
              LA +   
Sbjct: 235 LIGLASDFLF 244



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +V    + L           T  R+L   +++         L    + +   L P +
Sbjct: 44  PIAMVRDGWLLLTRFGFLSDIGMTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFV 103

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              + +P   F+   +++            E+  +  IF   V+ +   +  ++  + RD
Sbjct: 104 SFARYLPASAFVPLLILWAGIG--------EMQKLLVIFIGSVFQIVLMVAVAVGAVRRD 155

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E + +           + +P + P +   + + +   W +V+ +E+I          G
Sbjct: 156 LVEAAYTLGAGDSGIIRRVLIPATAPDIAETLRLVLGWAWTYVIVAELIGSSS------G 209

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           IG  I  +        I++ ++ +  +    D L 
Sbjct: 210 IGHMIIESQALLATGQIIFGIIVIGLIGLASDFLF 244


>gi|146278861|ref|YP_001169020.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145557102|gb|ABP71715.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 303

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 15/204 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + +    L +    T   +     ++++        AA+S R+  V+ P+LD+MQ++P  
Sbjct: 97  LAIGWFGLWRDTMVTLAMVSVCTGMAVVIGLPIGIAAARSDRMQRVINPVLDVMQTLPSF 156

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   VV F     GKV G     I+A+       M       +  +   + E + +F 
Sbjct: 157 VYLIPVVVIFG---IGKVPGMIAVVIYAVP-----PMIRLTNLGIRLVDAQVLEAAEAFG 208

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            SG QK W + +P ++P L+  +  ++      VV + M+ VG       G+G  +  AI
Sbjct: 209 SSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVVVASMVGVG-------GLGKNVLQAI 261

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQ 257
             Q           ++ +  ++D+
Sbjct: 262 NNQFFTLGFLNGFALVAIAIIFDR 285



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 86/276 (31%), Gaps = 18/276 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R I  +  +     S  +      L +        F        ++ +L + W       
Sbjct: 28  RTIDGTFRDIVRSWSGAIDAATAPLQIALNALERAFTSTPWIVVLALVLALVW------- 80

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A   +W+ +              +     +T+  V V   +A +I +P+GI       + 
Sbjct: 81  AGSRSWRIVAGTAVAMLAIGWFGLWRDTMVTLAMVSVCTGMAVVIGLPIGIAAARSDRMQ 140

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I P   ++   P+ V+   VV       +   + + +         ++     G    
Sbjct: 141 RVINPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 196

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                E A +F  +G +    + LP   P  +TG       A +  +V+ +   G     
Sbjct: 197 DAQVLEAAEAFGSSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVVVASMVGVG----- 251

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  + ++     F    L    +    +  +R
Sbjct: 252 --GLGKNVLQAINNQFFTLGFLNGFALVAIAIIFDR 285


>gi|260549387|ref|ZP_05823606.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate
           transport system [Acinetobacter sp. RUH2624]
 gi|260407496|gb|EEX00970.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate
           transport system [Acinetobacter sp. RUH2624]
          Length = 253

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L    L  +   +T R+L   +I      ++A     S+     L P    ++SIP L
Sbjct: 46  LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 105

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++       K+    + A F  +T        +   ++ N+ + L EV + +R
Sbjct: 106 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 157

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q+   + +P + PG++  +  S++  W F++A+E+I          GIG  ++   
Sbjct: 158 LNAFQRVLSIILPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGR 211

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +      ++ A++ +  +  + D L+ + +  W  ++R
Sbjct: 212 ETSRPDIVIIAIILLALLGKITDSLM-KLIENWLLRWR 248



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     I+ +RV+   II S + +   IW+G      + ++P    + + P+  + PL++
Sbjct: 53  LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 112

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +       L+  G  +    N +A          EV   + +  ++    II
Sbjct: 113 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRVLSII 168

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           LP   P  +TG   +   +W   I +E+ +       T G+G  +++  E
Sbjct: 169 LPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGRE 212


>gi|240140554|ref|YP_002965034.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens AM1]
 gi|254563044|ref|YP_003070139.1| glycine/betaine/proline ABC transporter membrane protein
           [Methylobacterium extorquens DM4]
 gi|240010531|gb|ACS41757.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens AM1]
 gi|254270322|emb|CAX26318.1| glycine/betaine/proline transporter, membrane component of ABC
           transporter [Methylobacterium extorquens DM4]
          Length = 283

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T + +  A   +L+         A SRR      PILD+MQ++P   +L   +
Sbjct: 87  LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F            ++A FA     V  +       + N+P +L E S +F  S  QK 
Sbjct: 147 PFFGLG--------AVSACFATIVFSVPPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  +M      VV + MI  G       G+G  +  +I+  +  A
Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSIQRLEAGA 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A + ++ V  + D++
Sbjct: 252 GFEAGIGIVIVAVILDRV 269



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368
           N +  L      +                 + +    W C+            + IG + 
Sbjct: 16  NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75

Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +W   + T+  V +    A +I +PVGIW            P   ++  
Sbjct: 76  LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+ V+    +       ++      +     +   ++     G    P++  E + +F 
Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVPPVIRLTALGIRNVPSELVEASDAFG 191

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    + LP   P  + G       A +  +++ +   G       GLG  + +S 
Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSI 244

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
           ++          + +    + L+R
Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268


>gi|218547805|ref|YP_002381596.1| glycine betaine transporter membrane protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355346|emb|CAQ87953.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|324111312|gb|EGC05294.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496272|gb|EGC94131.1| glycine betaine transporter membrane protein [Escherichia
           fergusonii ECD227]
          Length = 354

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPMAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +F         +G+   ++  ++           +    +    V+  ++   +I +
Sbjct: 109 AIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIVIGL 164

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I     
Sbjct: 165 PLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALP 220

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +  +
Sbjct: 221 PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVV 280

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 281 IASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|312138775|ref|YP_004006111.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888114|emb|CBH47426.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 280

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV++  ++  ++ + +G+  GF   +   I P  Q+L   P     PL +     
Sbjct: 84  AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + +  N+ AG  +      E A +  +  ++   +++LPG  
Sbjct: 144 G----EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGAL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G AW A IV+E  +         GLG  I  +        V+ G+L+  
Sbjct: 200 PQALTGLRMSLGVAWLALIVAEQIN------ADAGLGYLINNARIYFRIDIVIFGLLVYA 253

Query: 564 CFVLALNRFL 573
              LA +  +
Sbjct: 254 FLGLATDAIV 263



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 96/233 (41%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V          SL    + +  R+L   V+ +L   +   LA  SR + + + 
Sbjct: 60  LASPAQVVAAAAELWSDGSLQDALAVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAID 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P LG +   +++F           E   +F +    ++ +  +++  + +I
Sbjct: 120 PPIQMLRTVPFLGLIPLFIIWFGIG--------EQPKVFLVALGVLFPLYLNLFAGIRSI 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E + +  L+ +Q   ++ +P ++P  +  + MS+   W  ++ +E I        
Sbjct: 172 DGKLIEAAETLGLNKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAEQI------NA 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G  I  A     +  +++ +L    +    D   + L   ++ W   ++
Sbjct: 226 DAGLGYLINNARIYFRIDIVIFGLLVYAFLGLATDAIVRALEGRLLTWRKTYQ 278


>gi|312116288|ref|YP_004013884.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221417|gb|ADP72785.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 289

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 95/273 (34%), Gaps = 28/273 (10%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI--WL 382
              P+      + +R      ++   ++  VA          ++N   +     V+  W+
Sbjct: 19  LQLPKTTASRRTKRRKPPANLVYGLPLLFAVATLWELAPRLGLLNPIFFPAFSEVVSAWV 78

Query: 383 GCI-----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             I           ++ R     ++A ++ +P+G+ +G           F Q L   P  
Sbjct: 79  DLIVNGSLLSDVWASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTDLFVQTLRNTPQY 138

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL V  +     +       +  + + W +L N I+G  +      + A S     +
Sbjct: 139 ALLPLFVLTMGIGEASK----IAITFYASMWMLLINTISGVKSVDPTLIKAARSMGANDF 194

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +R ++LP   P    GA  A   +  + I +E+ +        +G+G  I  +     
Sbjct: 195 DLFRNVVLPASVPSITAGARLAVKASVVSVIGAEMLA------AQSGVGHLIQNAQLMMQ 248

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            PE+  G+L +      +N  L     ++  + 
Sbjct: 249 VPEMYAGILTLTVIGTTINYLL-----VWAEKK 276



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 19/211 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      +  R  +  ++++L       L    R+   +    +  +++ P    L  
Sbjct: 84  GSLLSDVWASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTDLFVQTLRNTPQYALLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+             E + I   F + +W +  +    + ++   L + +RS   + + 
Sbjct: 144 FVLTMGIG--------EASKIAITFYASMWMLLINTISGVKSVDPTLIKAARSMGANDFD 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S+P +     +++      V+ +EM+          G+G  I  A     +
Sbjct: 196 LFRNVVLPASVPSITAGARLAVKASVVSVIGAEMLA------AQSGVGHLIQNAQLMMQV 249

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +LT+  +    + LL     VW+ K
Sbjct: 250 PEMYAGILTLTVIGTTINYLL-----VWAEK 275


>gi|333001015|gb|EGK20585.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-272]
 gi|333015481|gb|EGK34820.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-227]
          Length = 354

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|15803198|ref|NP_289230.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832795|ref|NP_311568.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750921|ref|ZP_02775943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168755423|ref|ZP_02780430.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168762473|ref|ZP_02787480.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168768769|ref|ZP_02793776.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168774790|ref|ZP_02799797.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|168778660|ref|ZP_02803667.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787933|ref|ZP_02812940.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168800563|ref|ZP_02825570.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC508]
 gi|193065974|ref|ZP_03047033.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E22]
 gi|194427910|ref|ZP_03060456.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B171]
 gi|195938432|ref|ZP_03083814.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807590|ref|ZP_03249927.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814097|ref|ZP_03255426.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820172|ref|ZP_03260492.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396362|ref|YP_002272144.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326993|ref|ZP_03443076.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218690806|ref|YP_002399018.1| glycine betaine transporter membrane protein [Escherichia coli
           ED1a]
 gi|218701173|ref|YP_002408802.1| glycine betaine transporter membrane protein [Escherichia coli
           IAI39]
 gi|218706178|ref|YP_002413697.1| glycine betaine transporter membrane protein [Escherichia coli
           UMN026]
 gi|254794625|ref|YP_003079462.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|260845326|ref|YP_003223104.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O103:H2 str. 12009]
 gi|261225975|ref|ZP_05940256.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256767|ref|ZP_05949300.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284011|ref|YP_003500829.1| Glycine betaine/L-proline ABC transporter permease protein
           [Escherichia coli O55:H7 str. CB9615]
 gi|293406175|ref|ZP_06650101.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1412]
 gi|293412036|ref|ZP_06654759.1| glycine betaine transporter membrane protein [Escherichia coli
           B354]
 gi|298381912|ref|ZP_06991509.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1302]
 gi|300898659|ref|ZP_07116980.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300941046|ref|ZP_07155565.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|301306005|ref|ZP_07212085.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301327382|ref|ZP_07220631.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|306812441|ref|ZP_07446639.1| glycine betaine transporter membrane protein [Escherichia coli
           NC101]
 gi|331648399|ref|ZP_08349487.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M605]
 gi|331654161|ref|ZP_08355161.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M718]
 gi|331658789|ref|ZP_08359731.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA206]
 gi|331669416|ref|ZP_08370262.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA271]
 gi|12517117|gb|AAG57788.1|AE005496_11 high-affinity transport system for glycine betaine and proline
           [Escherichia coli O157:H7 str. EDL933]
 gi|13363012|dbj|BAB36964.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|187769535|gb|EDU33379.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|188014969|gb|EDU53091.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|189003312|gb|EDU72298.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189357321|gb|EDU75740.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189362133|gb|EDU80552.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189367256|gb|EDU85672.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372114|gb|EDU90530.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189377180|gb|EDU95596.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC508]
 gi|192926388|gb|EDV81023.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli E22]
 gi|194414143|gb|EDX30419.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli B171]
 gi|208727391|gb|EDZ76992.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735374|gb|EDZ84061.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740295|gb|EDZ87977.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157762|gb|ACI35195.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209762218|gb|ACI79421.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762220|gb|ACI79422.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762222|gb|ACI79423.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762224|gb|ACI79424.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|209762226|gb|ACI79425.1| high-affinity glycine betaine / proline transport system protein
           [Escherichia coli]
 gi|217319360|gb|EEC27785.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218371159|emb|CAR18990.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218428370|emb|CAR09299.2| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218433275|emb|CAR14175.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222034378|emb|CAP77119.1| glycine betaine/L-proline transport system permease [Escherichia
           coli LF82]
 gi|254594025|gb|ACT73386.1| glycine betaine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257760473|dbj|BAI31970.1| high-affinity transport system for glycine betaine and proline,
           membrane component [Escherichia coli O103:H2 str. 12009]
 gi|290763884|gb|ADD57845.1| Glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli O55:H7 str. CB9615]
 gi|291426181|gb|EFE99213.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1412]
 gi|291468807|gb|EFF11298.1| glycine betaine transporter membrane protein [Escherichia coli
           B354]
 gi|298277052|gb|EFI18568.1| glycine betaine transporter membrane protein [Escherichia coli
           FVEC1302]
 gi|300357687|gb|EFJ73557.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300454210|gb|EFK17703.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300838716|gb|EFK66476.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846036|gb|EFK73796.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|305854479|gb|EFM54917.1| glycine betaine transporter membrane protein [Escherichia coli
           NC101]
 gi|312947213|gb|ADR28040.1| glycine betaine transporter membrane protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315254454|gb|EFU34422.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315298698|gb|EFU57952.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320189009|gb|EFW63668.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. EC1212]
 gi|320640667|gb|EFX10203.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320646032|gb|EFX15009.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320651332|gb|EFX19763.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320656723|gb|EFX24611.1| glycine betaine transporter membrane protein [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662266|gb|EFX29663.1| glycine betaine transporter membrane protein [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667317|gb|EFX34275.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323159819|gb|EFZ45791.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli E128010]
 gi|323188440|gb|EFZ73726.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli RN587/1]
 gi|323966930|gb|EGB62358.1| inner membrane transport system [Escherichia coli M863]
 gi|323978711|gb|EGB73793.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324005775|gb|EGB74994.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|326338607|gb|EGD62433.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. 1044]
 gi|326342865|gb|EGD66633.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli O157:H7 str. 1125]
 gi|327251396|gb|EGE63082.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli STEC_7v]
 gi|330908709|gb|EGH37223.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli AA86]
 gi|331042146|gb|EGI14288.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M605]
 gi|331047543|gb|EGI19620.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli M718]
 gi|331053371|gb|EGI25400.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA206]
 gi|331063084|gb|EGI34997.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA271]
          Length = 354

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|91209432|ref|YP_539418.1| taurine transporter subunit [Escherichia coli UTI89]
 gi|117622634|ref|YP_851547.1| taurine transporter subunit [Escherichia coli APEC O1]
 gi|218557280|ref|YP_002390193.1| taurine transporter subunit [Escherichia coli S88]
 gi|237707643|ref|ZP_04538124.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|91071006|gb|ABE05887.1| taurine transport system permease protein TauC [Escherichia coli
           UTI89]
 gi|115511758|gb|ABI99832.1| taurine transport system permease protein TauC [Escherichia coli
           APEC O1]
 gi|218364049|emb|CAR01714.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|226898853|gb|EEH85112.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|294490726|gb|ADE89482.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|307628162|gb|ADN72466.1| taurine transporter subunit [Escherichia coli UM146]
 gi|315289831|gb|EFU49221.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299597|gb|EFU58845.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|323953018|gb|EGB48886.1| inner membrane transport system [Escherichia coli H252]
 gi|323958561|gb|EGB54264.1| inner membrane transport system [Escherichia coli H263]
          Length = 275

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|220904097|ref|YP_002479409.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868396|gb|ACL48731.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 280

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +LSA ++S+L       LAA S     +++P+LD+MQ++P   +L   
Sbjct: 84  GLWTPTISTLALVLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVMQTMPAFVYLIPA 143

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           +++A+ A     V          +  +PRDL E + +F  +  Q+
Sbjct: 144 IPFFGIG--------KVSAVVATVIFSVPPAIRFTCLGIQQVPRDLVECTEAFGATRMQR 195

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + L +P +MP +V  +  ++       V + MI          G+G  +  AI+  ++ 
Sbjct: 196 LYKLELPLAMPTIVAGVNQTIMLALSMAVIAAMI-------GARGLGGEVWKAIQRLNIG 248

Query: 240 AILYAMLTMLGVIFLYDQLL 259
               A L ++ V    D+L 
Sbjct: 249 MGFEAGLGIVIVAITLDRLF 268



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 11/208 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++   F     L +      T+  V+   +++ ++ +P GI     P     + P   ++
Sbjct: 72  FVALGFALLWNLGLWTPTISTLALVLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVM 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA V+    +       ++  +   +     +    +     G    P D  E   +
Sbjct: 132 QTMPAFVYLIPAIPFFGIGKVSAVVATVIF----SVPPAIRFTCLGIQQVPRDLVECTEA 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  T  +    + LP   P  V G       A + ++++ +           GLG  + +
Sbjct: 188 FGATRMQRLYKLELPLAMPTIVAGVNQTIMLALSMAVIAAMIG-------ARGLGGEVWK 240

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + ++ +        L +    + L+R  
Sbjct: 241 AIQRLNIGMGFEAGLGIVIVAITLDRLF 268


>gi|158520230|ref|YP_001528100.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
 gi|158509056|gb|ABW66023.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
          Length = 252

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++     S+  I VG  +G+R  I   + P   L    PA  + PL++  +  
Sbjct: 60  AASLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPLLMLWIGI 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             + P      L+   + + +L+N + G      D+  VA +   +  R    ++LP   
Sbjct: 120 NEMLP----ITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGRILFAVVLPLAL 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G AW   I +E+ +        TG+GA +  +            ++I+C
Sbjct: 176 PNIFTGLRLEAGMAWRTVIAAEMVAIP------TGIGALLMRAESLMRID-----IIIVC 224

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
             VLA+   ++  L+ +  R L
Sbjct: 225 LIVLAVMCLVFENLFAWLERRL 246



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 19/211 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +  + +  R+L       +   V  T     R +   L PI+ +   IP LG++  
Sbjct: 53  GVLGKSFAASLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E+  I  IF    + + ++    +  +  D   V+R+   S  +
Sbjct: 113 LMLWIGIN--------EMLPITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGR 164

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P ++P +   + +     W  V+A+EM+ +        GIG+ +  A     +
Sbjct: 165 ILFAVVLPLALPNIFTGLRLEAGMAWRTVIAAEMVAIPT------GIGALLMRAESLMRI 218

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             I+  ++ +  +      L+F  +  W  +
Sbjct: 219 DIIIVCLIVLAVMC-----LVFENLFAWLER 244


>gi|82775852|ref|YP_402199.1| taurine transporter subunit [Shigella dysenteriae Sd197]
 gi|81240000|gb|ABB60710.1| taurine transport system permease protein [Shigella dysenteriae
           Sd197]
          Length = 275

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     GG W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGGGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 104/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
           GGW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 GGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|16265231|ref|NP_438023.1| putative aliphatic sulfonate uptake ABC transporter permease
           protein [Sinorhizobium meliloti 1021]
 gi|307301542|ref|ZP_07581302.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|15141371|emb|CAC49883.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306903599|gb|EFN34187.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 281

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 25/265 (9%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383
           +L+       S++           +    +           +   +L  +W G       
Sbjct: 24  YLRRSGAAAGSWLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83

Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I++ R     + A ++ IP+G+ +G    I + + P  QL     A   +P+ +  
Sbjct: 84  DDIAISLQRSGTAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILL 143

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +     +       ++ + T + +L + I+G     +   E+A  +  +    +R ++LP
Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P    G   +   A    I SE+           G+G  +  +      P +   + 
Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253

Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585
           I+    L  N  L     ++  R L
Sbjct: 254 ILAGLGLVSNYAL-----VFAQRRL 273



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73
           + + + LL   L +         I     P    I+  +   +   +L    + +  R  
Sbjct: 35  WLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSG 94

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A V +++       L  + R +   L P+L + +    L      ++            
Sbjct: 95  TAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + +F IF + ++ +  S    +  +   L E++R +  S    F  + +P ++P + 
Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +     ++ASEMI          GIG  +  A     +  +  A+  + G+  
Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260

Query: 254 LYDQLLF---RPMIVWSN 268
           + +  L    R +  WS+
Sbjct: 261 VSNYALVFAQRRLCRWSD 278


>gi|170680258|ref|YP_001744829.1| glycine betaine transporter membrane protein [Escherichia coli
           SMS-3-5]
 gi|170517976|gb|ACB16154.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli SMS-3-5]
          Length = 354

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|167840220|ref|ZP_02466904.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 284

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 13/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L   +  V   +  G        +V      D   +      ++ R+     +A +
Sbjct: 48  AGWWLAARFEWVPAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLSRIATAFALAVV 107

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             IPVGI I     +   + P  +     P   + PL+V        +  L + L M   
Sbjct: 108 TAIPVGILIATNRIVRGVVDPVVEFYRPIPPLAYLPLMVVWFGIGDASKVLLIYLTMFA- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +     AGAS         A+S   T ++  R+++LP   P  +TG   A G  W+
Sbjct: 167 ---PLAIATAAGASGVSESRLRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWS 223

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHP 576
             + +E+ +       T GLG  +  ++       V+ G+L++    LAL    R L   
Sbjct: 224 TLVAAELIA------ATRGLGFMLYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRR 277

Query: 577 LYLY 580
           L  +
Sbjct: 278 LTPW 281



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L Q+   +  R+ +A  ++++       L A +R +  V+ P+++  + IP L 
Sbjct: 81  GFDDATLGQHLLASLSRIATAFALAVVTAIPVGILIATNRIVRGVVDPVVEFYRPIPPLA 140

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F      KV+         I+ +    +  +       +       + S   
Sbjct: 141 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 192

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + ++   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 193 TRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMLYSASR 246

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 247 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 281


>gi|239932299|ref|ZP_04689252.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291440664|ref|ZP_06580054.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343559|gb|EFE70515.1| glycine betaine transport system permease protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 872

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  ++   ++ T             LD   L + +  T   ++ A VI+L+ +  
Sbjct: 49  LLLAGIFAVIAFWLRGTFAGVLTFVGFAF-LDSLELWEDSMVTLALVIVATVIALVISVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+  ++ P+LD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSDRVSAMVRPVLDFMQTLPAMIYLIPAILFFG---TGPAPGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  AI + ++     + + ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGA-------VIEAIGQLNIGLGAESGIAIVILAIYLDRM 265



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 6/166 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                +  V       +   ++    +   D L +     +T+  V+V  +IA +I +PV
Sbjct: 49  LLLAGIFAVIAFWLRGTFAGVLTFVGFAFLDSLELWEDSMVTLALVIVATVIALVISVPV 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S+ ++P    +   PA ++    +  + ++   P   +   +IF      
Sbjct: 109 GIWAARSDRVSAMVRPVLDFMQTLPAMIYL---IPAILFFGTGPAPGIVATLIF-ALAPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           +     G      +  E A +F  T       + LP   P  + G 
Sbjct: 165 VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGV 210


>gi|146311110|ref|YP_001176184.1| alkanesulfonate transporter permease subunit [Enterobacter sp. 638]
 gi|145317986|gb|ABP60133.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 263

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           R++         ++  +A  + W S   + +     +  + +           I+ +R  
Sbjct: 11  RLAPWFLPVGIVIIWQIASSVGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAA 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   I + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 106/266 (39%), Gaps = 18/266 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
               F  +  V++  I + +     +    P  +V+          L Q+ + ++ R   
Sbjct: 12  LAPWFLPVGIVIIWQIASSVGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAAI 71

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I          ++  SR    +L   + +++++P L  +   +++F           
Sbjct: 72  GFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID-------- 123

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++ 
Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          GIG     A +      ++ A++    +  L
Sbjct: 184 GVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237

Query: 255 YD---QLLFRPMIVWSNKFRLERTTG 277
            D   Q L R  + W+  + L+    
Sbjct: 238 ADVSAQWLERSWLRWNPAYSLKEANA 263


>gi|293408514|ref|ZP_06652353.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471692|gb|EFF14175.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 275

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 102/253 (40%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P+ ++  +     P      +L Q+ + +  R++ A++
Sbjct: 33  VLLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           S  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|170767687|ref|ZP_02902140.1| taurine uptake ABC transporter, permease protein [Escherichia
           albertii TW07627]
 gi|170123175|gb|EDS92106.1| taurine uptake ABC transporter, permease protein [Escherichia
           albertii TW07627]
          Length = 275

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 19/266 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   +  +L I+W      +   +      Q +  ++     Q  
Sbjct: 12  RWLKWRWPLSRQATLSISTLVVLLAIWWAVAALQLMSPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+ + +  A +I IPVGI +G  P     + P  +L    P   + 
Sbjct: 72  MDATLWQHLVASLTRIALALFAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V               LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETTK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G   +  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGGSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPL 577
           V+ G+ ++      L    R L   L
Sbjct: 242 VLAGIAVIAVIAFLLELGLRALQRRL 267



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 96/249 (38%), Gaps = 20/249 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           ++   +   +  + L        P+ ++  +     P      +L Q+   +  R+  A+
Sbjct: 32  VVLLAIWWAVAALQLMSPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLVASLTRIALAL 91

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             ++L           S     +L P++++ + +P L +L   V++F           E 
Sbjct: 92  FAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ET 143

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  +
Sbjct: 144 TKILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPEILTGL 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +  G   +VA+E+I          G+G  +  A  E     ++ A + ++ VI    
Sbjct: 204 RIGLGVGGSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFLL 256

Query: 257 QLLFRPMIV 265
           +L  R +  
Sbjct: 257 ELGLRALQR 265


>gi|317485696|ref|ZP_07944567.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316923061|gb|EFV44276.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 280

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 100/254 (39%), Gaps = 18/254 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI----VPITLDVHSLPQYA 65
           FI+ + F N+  ++ F+ +   +            P ++VD       +     +L  + 
Sbjct: 24  FITNKYFLNVVSIVLFLALWDYVAKEKIFRDSLARPLEVVDQLYRLTYMKFAGTNLIGHI 83

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +T R+L   + + +         A ++ +  ++ P+ D+ + +P + +++  +++F  
Sbjct: 84  WASTQRVLIGFIAASVVAVPLGLFMALNKYVNAIVKPLFDLFKPMPPIAWVSIAILWFGI 143

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E++ +F I          + Y  +  +  DL +V R        + +++  
Sbjct: 144 G--------EMSKVFIIIIGTFVPCLLNAYNGVRLVDPDLYDVIRVLGGKRRDEIFHVCF 195

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S P +   + +S+S  W  V+A+E++          G+G  I   +       +L  M
Sbjct: 196 PASFPAVFAGLQISLSSAWTCVLAAELM------NSRDGMGFLIKRGMDTHQPTLVLGGM 249

Query: 246 LTMLGVIFLYDQLL 259
           + +    +    L+
Sbjct: 250 VLIAAAAYGTSLLV 263



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     +  RV++  I AS++ +P+G+++    ++++ ++P   L    P   +  + +
Sbjct: 79  LIGHIWASTQRVLIGFIAASVVAVPLGLFMALNKYVNAIVKPLFDLFKPMPPIAWVSIAI 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  ++       ++I GT    L N   G      D  +V             ++ 
Sbjct: 139 LWFGIGEMSK----VFIIIIGTFVPCLLNAYNGVRLVDPDLYDVIRVLGGKRRDEIFHVC 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P  FP    G   +   AW   + +E+ +         G+G  I    +      V+ G
Sbjct: 195 FPASFPAVFAGLQISLSSAWTCVLAAELMNSRD------GMGFLIKRGMDTHQPTLVLGG 248

Query: 559 VLIMCC 564
           ++++  
Sbjct: 249 MVLIAA 254


>gi|256788772|ref|ZP_05527203.1| glycine betaine transport system permease protein [Streptomyces
           lividans TK24]
 gi|289772667|ref|ZP_06532045.1| glycine betaine transport system permease [Streptomyces lividans
           TK24]
 gi|289702866|gb|EFD70295.1| glycine betaine transport system permease [Streptomyces lividans
           TK24]
          Length = 872

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  ++   ++ T             +D   L + A  T   +L A +I+L+    
Sbjct: 49  LLLAGIFAVIAFWLRGTFAGILSFAGFAF-IDSLELWENAMVTLALLLVATIIALVVAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+   + P+LD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSDRVSAFVRPVLDFMQTLPAMIYLIPAILFFG---TGSAPGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPGNTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  +I + ++     A L ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VMESIGQLNVGLGAEAGLAIVILAIYLDRM 265



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 12/262 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +  +      ++  F   +  + +  +    L +     V    +   +  I      
Sbjct: 16  WLLDNVSWLFTFLKDIFTGAYDGINAVLQAPEPLLLAGIFAVIAFWLRGTFAGI-LSFAG 74

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F + D L +     +T+  ++V  IIA ++ +PVGIW      +S+ ++P    +   PA
Sbjct: 75  FAFIDSLELWENAMVTLALLLVATIIALVVAVPVGIWAARSDRVSAFVRPVLDFMQTLPA 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            ++    +         P +  +L+         +     G      +  E A +F  T 
Sbjct: 135 MIYLIPAILFFGTGSA-PGIVATLIFALA---PGVRMTELGIRQVDKELVEAAEAFGTTP 190

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 + LP   P  + G         + + ++ +   G +          + ES  + 
Sbjct: 191 GNTLLRVQLPLALPTVMAGVNQVIMLGLSMAAIAGMVGTGGLGGD-------VMESIGQL 243

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
           +        L +    + L+R 
Sbjct: 244 NVGLGAEAGLAIVILAIYLDRM 265


>gi|255283057|ref|ZP_05347612.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255266359|gb|EET59564.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 261

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 79/214 (36%), Gaps = 10/214 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
              +  Y +   T  D   ++     ++   +    +  ++ +P+GI + +        +
Sbjct: 46  ILNTFWYKLTGGTVPDGSSLLENIWSSLKIALGGYAVGVLVGVPLGIGMAWNKRFELFAK 105

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   PA  + PL++  +   + +       ++ F        N   G        
Sbjct: 106 PLFDIIRPVPALAWIPLMILWLGIGYASKVG----IIFFAAFISATVNSYTGIRRTSQVH 161

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             V  +F  T  +    I +P   P   TG   A G AW A + +E+ +       T+GL
Sbjct: 162 LWVGKTFGATNRQMLFKIAIPTALPMIFTGLRLALGSAWVALVAAEMLA------ATSGL 215

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I  S   G    +++G+L +    L LN  L
Sbjct: 216 GYMIQISRMMGRPDVIIVGMLTIGFVGLLLNTVL 249



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  SL +    +    L    + +L         A ++R  +   P+ DI++ +P L ++
Sbjct: 61  DGSSLLENIWSSLKIALGGYAVGVLVGVPLGIGMAWNKRFELFAKPLFDIIRPVPALAWI 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++    Y  K        +  IF +   + T + Y  +    +    V ++F  + 
Sbjct: 121 PLMILWLGIGYASK--------VGIIFFAAFISATVNSYTGIRRTSQVHLWVGKTFGATN 172

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  + + +P ++P +   + +++   W  +VA+EM+          G+G  I ++    
Sbjct: 173 RQMLFKIAIPTALPMIFTGLRLALGSAWVALVAAEMLA------ATSGLGYMIQISRMMG 226

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               I+  MLT+  V  L + +L +
Sbjct: 227 RPDVIIVGMLTIGFVGLLLNTVLEK 251


>gi|111021912|ref|YP_704884.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110821442|gb|ABG96726.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 291

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 14/257 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCIT 386
           P  +  L  +  +   L ++      G+   +       +V  F        +W     +
Sbjct: 43  PIAWRILKPSVAIVAFLALWEIAPRAGLVDEVFLPPFSTVVEAFFDLVKSGELWQHVSAS 102

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R ++   +A +I IP+GI I +   +S  + P  +L     A    P+ +  +     
Sbjct: 103 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIGEE 162

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       L+I+   + IL N I+G         + ASS  ++  R ++ ++LP   P  
Sbjct: 163 SK----IALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVPTI 218

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A   +    I +E+           GLG  I  S      P +  G++ +    
Sbjct: 219 FTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISVLG 272

Query: 567 LALN---RFLWHPLYLY 580
           L LN     +   L  +
Sbjct: 273 LTLNAVLVLIERRLSRW 289



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 94/261 (36%), Gaps = 18/261 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRT 68
            I+ RI      ++AF+ +  I        +    P   V      L     L Q+ S +
Sbjct: 43  PIAWRILKPSVAIVAFLALWEIAPRAGLVDEVFLPPFSTVVEAFFDLVKSGELWQHVSAS 102

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L    ++++         A  R +   L PIL++ ++   L  L   ++       
Sbjct: 103 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIG-- 160

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + I  +  +  + +  +    +  +   L + + S  LS  + F  + +P +
Sbjct: 161 ------EESKIALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAA 214

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + M+ +     ++A+EM+          G+G  I  +     +  +   ++ +
Sbjct: 215 VPTIFTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQFNFQIPNMYAGIVAI 268

Query: 249 LGVIFLYD---QLLFRPMIVW 266
             +    +    L+ R +  W
Sbjct: 269 SVLGLTLNAVLVLIERRLSRW 289


>gi|297623965|ref|YP_003705399.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297165145|gb|ADI14856.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 300

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L+A  + +L       L A S      L P+LD MQ++P   +L   V +F    
Sbjct: 94  TLTLVLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGL-- 151

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G     +FA     +  +       L  +P+D+ E + +F  + WQ+   + +P 
Sbjct: 152 -GLVPGVVATVVFA-----LPPLVRLTNLGLRQVPKDIVEAAEAFGGTRWQRLRKVELPA 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L+  +  S+      VV + +I  G       G+G  +   +   D+     A L 
Sbjct: 206 ARPMLLAGVNQSIMLSLSMVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAGLA 258

Query: 248 MLGVIFLYDQL 258
           ++ +  + D+L
Sbjct: 259 IVIMAVVLDRL 269



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 11/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+  V+    +  ++ +P+GI +         + P    +   P+ V+    V+    
Sbjct: 92  ILTLTLVLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGL 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   +   +         ++     G    P D  E A +F  T W+  R + LP   
Sbjct: 152 GLVPGVVATVVF----ALPPLVRLTNLGLRQVPKDIVEAAEAFGGTRWQRLRKVELPAAR 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   +   + +  +++ +   G       GLG  +                L + 
Sbjct: 208 PMLLAGVNQSIMLSLSMVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAGLAIV 260

Query: 564 CFVLALNRF 572
              + L+R 
Sbjct: 261 IMAVVLDRL 269


>gi|73669863|ref|YP_305878.1| glycine betaine/L-proline ABC transporter permease [Methanosarcina
           barkeri str. Fusaro]
 gi|72397025|gb|AAZ71298.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           barkeri str. Fusaro]
          Length = 274

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 16/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           L I +I +L + + +  +       +   L     L   +  T   +LS+ +++L+    
Sbjct: 50  LFIAVIFLLAYFVGKRNIKLAAGTAIGFFLIQNMGLWTLSMETLALVLSSTLLALIIGIP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L+AK+  L  +L P+LD MQ++P   +L   +++F     G V       +FA+  +
Sbjct: 110 LGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFFQL---GNVPSMIATVVFAMPPA 166

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +P +L EV+ SF  + WQK   + +P ++P ++  +   +     
Sbjct: 167 -----IRLTNLGIRQVPIELTEVADSFGSTSWQKLSKVELPVALPTIMAGVNQCIMLSLS 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI          G+G  + L I+  D+     A L+++ +    D++
Sbjct: 222 MVVIAAMI-------GARGLGYQVLLGIQRVDIGMGFEAGLSIVIIAVFLDRI 267



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
            +  V+  +A  +  ++I         F     + +  L   T+  V+   ++A II IP
Sbjct: 50  LFIAVIFLLAYFVGKRNIKLAAGTAIGFFLIQNMGLWTLSMETLALVLSSTLLALIIGIP 109

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI       +SS ++P    +   P  V+    +      ++   +   +         
Sbjct: 110 LGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFFQLGNVPSMIATVVF----AMPP 165

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            +     G    P +  EVA SF  T W+    + LP   P  + G       + +  ++
Sbjct: 166 AIRLTNLGIRQVPIELTEVADSFGSTSWQKLSKVELPVALPTIMAGVNQCIMLSLSMVVI 225

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +    ++          L +    + L+R 
Sbjct: 226 AAMIG-------ARGLGYQVLLGIQRVDIGMGFEAGLSIVIIAVFLDRI 267


>gi|21220116|ref|NP_625895.1| glycine betaine transport system permease [Streptomyces coelicolor
           A3(2)]
 gi|6119662|emb|CAB59473.1| glycine betaine transport system permease protein [Streptomyces
           coelicolor A3(2)]
          Length = 871

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  ++   ++ T             +D   L + A  T   +L A +I+L+    
Sbjct: 49  LLLAGIFAVIAFWLRGTFAGILSFAGFAF-IDSLELWENAMVTLALLLVATIIALVVAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+   + P+LD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSDRVSAFVRPVLDFMQTLPAMIYLIPAILFFG---TGSAPGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPGNTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  +I + ++     A L ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VMESIGQLNVGLGAEAGLAIVILAIYLDRM 265



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 12/262 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +  +      ++  F   +  + +  +    L +     V    +   +  I      
Sbjct: 16  WLLDNVSWLFTFLKDIFTGAYDGINAVLQAPEPLLLAGIFAVIAFWLRGTFAGI-LSFAG 74

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F + D L +     +T+  ++V  IIA ++ +PVGIW      +S+ ++P    +   PA
Sbjct: 75  FAFIDSLELWENAMVTLALLLVATIIALVVAVPVGIWAARSDRVSAFVRPVLDFMQTLPA 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            ++    +         P +  +L+         +     G      +  E A +F  T 
Sbjct: 135 MIYLIPAILFFGTGSA-PGIVATLIFALA---PGVRMTELGIRQVDKELVEAAEAFGTTP 190

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 + LP   P  + G         + + ++ +   G +          + ES  + 
Sbjct: 191 GNTLLRVQLPLALPTVMAGVNQVIMLGLSMAAIAGMVGTGGLGGD-------VMESIGQL 243

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
           +        L +    + L+R 
Sbjct: 244 NVGLGAEAGLAIVILAIYLDRM 265


>gi|91778565|ref|YP_553773.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91691225|gb|ABE34423.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 281

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 92/231 (39%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASI 399
           ++ I+W  V    A G             T   ++    L      ++ R+ + ++ A +
Sbjct: 42  IVAIWWLAVAVFAAPGTLAAQFSPARAIETLPALITDDRLAVHIVTSLRRIAIGLLWALV 101

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+G  IG    + + + P  Q L       + P+ V  +          +  L+ F 
Sbjct: 102 VGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVGDR----AVYFLLAFA 157

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W ++ +  AG +     + ++  S   T      Y+ +PGI  + +TG   A G  W 
Sbjct: 158 AVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAHVLTGVRLAIGILWI 217

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +E+         ++GLG  I ++ ++ ++ E+   +L++      L+
Sbjct: 218 VLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGALGFLLD 262



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + +      G       P   ++ +P  +    L  +   +  R+   ++ +L+      
Sbjct: 48  LAVAVFAAPGTLAAQFSPARAIETLPALITDDRLAVHIVTSLRRIAIGLLWALVVGVPLG 107

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  + + L   L P L  ++ I  L ++   V+             + A  F +  + V
Sbjct: 108 FLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVG--------DRAVYFLLAFAAV 159

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  S    + +I +   ++  S   +  +  WY+ VP     ++  + +++   W  +
Sbjct: 160 WPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAHVLTGVRLAIGILWIVL 219

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           V +EM+ V        G+G  I           +   +L +  + FL D 
Sbjct: 220 VPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGALGFLLDF 263


>gi|26246370|ref|NP_752409.1| taurine transporter subunit [Escherichia coli CFT073]
 gi|218688234|ref|YP_002396446.1| taurine transporter subunit [Escherichia coli ED1a]
 gi|227884628|ref|ZP_04002433.1| taurine transporter subunit [Escherichia coli 83972]
 gi|300988135|ref|ZP_07178572.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301049560|ref|ZP_07196514.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|306813164|ref|ZP_07447357.1| taurine transporter subunit [Escherichia coli NC101]
 gi|331656421|ref|ZP_08357383.1| taurine transport system permease protein TauC [Escherichia coli
           TA206]
 gi|26106768|gb|AAN78953.1|AE016756_136 Taurine transport system permease protein tauC [Escherichia coli
           CFT073]
 gi|218425798|emb|CAR06604.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|222032167|emb|CAP74906.1| Taurine transport system permease protein tauC [Escherichia coli
           LF82]
 gi|227838714|gb|EEJ49180.1| taurine transporter subunit [Escherichia coli 83972]
 gi|300298651|gb|EFJ55036.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300407549|gb|EFJ91087.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|305853927|gb|EFM54366.1| taurine transporter subunit [Escherichia coli NC101]
 gi|307552275|gb|ADN45050.1| taurine transport system permease protein TauC [Escherichia coli
           ABU 83972]
 gi|312944948|gb|ADR25775.1| taurine transporter subunit [Escherichia coli O83:H1 str. NRG 857C]
 gi|315294163|gb|EFU53514.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|331054669|gb|EGI26678.1| taurine transport system permease protein TauC [Escherichia coli
           TA206]
          Length = 275

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAILLTVWWVVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWVVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|293418437|ref|ZP_06660872.1| taurine transporter subunit [Escherichia coli B088]
 gi|300903373|ref|ZP_07121301.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|301301510|ref|ZP_07207645.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|291324965|gb|EFE64380.1| taurine transporter subunit [Escherichia coli B088]
 gi|300404668|gb|EFJ88206.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300843007|gb|EFK70767.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|315256185|gb|EFU36153.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
          Length = 275

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|134282026|ref|ZP_01768732.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|134246555|gb|EBA46643.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
          Length = 283

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|118473365|ref|YP_885555.1| taurine transporter permease TauC [Mycobacterium smegmatis str. MC2
           155]
 gi|118174652|gb|ABK75548.1| taurine transport system permease protein TauC [Mycobacterium
           smegmatis str. MC2 155]
          Length = 268

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 94/254 (37%), Gaps = 11/254 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYV 379
           G  R      +  +     ++  L ++      G+   +    + ++V   FT      +
Sbjct: 11  GRGRRFRALTWRLVRPVVVIALFLGVWETAPRIGMVDNVFLPPLSHVVQAWFTLLGNGQL 70

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R +    +A ++ IP+G+ IG+   ++  + P  +L     A    P+ V 
Sbjct: 71  WEHVSASLSRALAGFALAILVSIPLGVAIGWYRPVADFLNPILELFRNTAALALLPVFVL 130

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +     +       L+++ + + IL N I+G         + A S  ++  R ++ ++L
Sbjct: 131 ILGIGETSK----VALVVYASAFPILLNTISGVRTVDPLLIKSARSLGLSPVRLFQKVVL 186

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P   TG   A   +    I +E+           GLG  I  S      P +  G+
Sbjct: 187 PAAVPTIFTGLRMAAASSILVLIAAEMVG------AKAGLGYLITASQLNFQIPNMYAGI 240

Query: 560 LIMCCFVLALNRFL 573
           + +    +  N  L
Sbjct: 241 VTIALVGVVFNSVL 254



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 82/204 (40%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L ++ S +  R L+   +++L +          R +   L PIL++ ++   L  
Sbjct: 65  LGNGQLWEHVSASLSRALAGFALAILVSIPLGVAIGWYRPVADFLNPILELFRNTAALAL 124

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+             E + +  +  +  + +  +    +  +   L + +RS  LS
Sbjct: 125 LPVFVLILGIG--------ETSKVALVVYASAFPILLNTISGVRTVDPLLIKSARSLGLS 176

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P ++P +   + M+ +     ++A+EM+          G+G  I  +   
Sbjct: 177 PVRLFQKVVLPAAVPTIFTGLRMAAASSILVLIAAEMVGAKA------GLGYLITASQLN 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  +   ++T+  V  +++ +L
Sbjct: 231 FQIPNMYAGIVTIALVGVVFNSVL 254


>gi|126442420|ref|YP_001063214.1| taurine ABC transporter permease [Burkholderia pseudomallei 668]
 gi|126221911|gb|ABN85416.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
          Length = 283

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|218529259|ref|YP_002420075.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218521562|gb|ACK82147.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 293

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     +A+   +P+G+ IG  P + + + P  Q+L   P   + PL +      
Sbjct: 100 ASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLG 159

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+  G  + IL N + G  +      E A+    TG   +  ++LP   P
Sbjct: 160 ATS----AFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALP 215

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G AW   +V E+          TGLGA I E+ +      V+ G+ ++  
Sbjct: 216 SIFTGLRLGLGFAWVVIVVGEM------TGVQTGLGAVIMEARQLSRTEIVICGMGVIGV 269

Query: 565 FVLALNRFLWH 575
                +  +  
Sbjct: 270 AGFVSDWIVMR 280



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   +  R+     ++         +  +   +  +L P+L I++ IP+  +L  
Sbjct: 92  ATLWAHLWASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPL 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             +A F +F    + +  +    + ++   L E +     +G  
Sbjct: 152 AMILFGLGAT--------SAFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPA 203

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +F  + +P ++P +   + + +   W  +V  EM  V        G+G+ I  A +    
Sbjct: 204 QFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVQT------GLGAVIMEARQLSRT 257

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M  +    F+ D ++    R ++ WS 
Sbjct: 258 EIVICGMGVIGVAGFVSDWIVMRVGRRLLSWSP 290


>gi|26249073|ref|NP_755113.1| glycine betaine transporter membrane protein [Escherichia coli
           CFT073]
 gi|215487999|ref|YP_002330430.1| glycine betaine transporter membrane protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|227888212|ref|ZP_04006017.1| glycine betaine transporter membrane protein [Escherichia coli
           83972]
 gi|301019056|ref|ZP_07183267.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|312965593|ref|ZP_07779823.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 2362-75]
 gi|331664235|ref|ZP_08365141.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA143]
 gi|331674199|ref|ZP_08374959.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA280]
 gi|331684296|ref|ZP_08384888.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H299]
 gi|26109480|gb|AAN81683.1|AE016765_85 Glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli CFT073]
 gi|215266071|emb|CAS10491.1| high-affinity transport system for glycine betaine and proline;
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|227834852|gb|EEJ45318.1| glycine betaine transporter membrane protein [Escherichia coli
           83972]
 gi|284922620|emb|CBG35708.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli 042]
 gi|300399409|gb|EFJ82947.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|307554654|gb|ADN47429.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli ABU 83972]
 gi|312289742|gb|EFR17632.1| glycine betaine/L-proline transport system permease protein proW
           [Escherichia coli 2362-75]
 gi|331058166|gb|EGI30147.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA143]
 gi|331068293|gb|EGI39688.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli TA280]
 gi|331077911|gb|EGI49117.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli H299]
          Length = 354

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|323700263|ref|ZP_08112175.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323460195|gb|EGB16060.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 257

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++RV+V   +A++I +P+G+ I      S  + P  +     P     PL +       
Sbjct: 66  SVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPLTLLYFGIGD 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  GT + ++  V    +  P D    A++      + +R ++ PG  P 
Sbjct: 126 AQK----FAIIFLGTFFQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPG 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +       G AW   +V+E+ +        +GLG  I  +    +   +  G++I+   
Sbjct: 182 IMDDLRITVGWAWTYLVVAELVA------ANSGLGYMILRAQRFLAIDRIFAGLIIIGVL 235

Query: 566 VLALNRFL 573
            L  +   
Sbjct: 236 GLLTDYLF 243



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  Y   +  R++    ++ +       L A SRR   ++ P+++  + +P++  +  T+
Sbjct: 59  LFSYTWDSVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPLTL 118

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +YF           +      IF    + +   +  S+  +P DL   + +   +  Q +
Sbjct: 119 LYFGIG--------DAQKFAIIFLGTFFQLVLMVADSVATVPADLSRAAATLGANRLQTY 170

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P ++PG++ ++ +++   W ++V +E++          G+G  I  A +   +  
Sbjct: 171 RLVLFPGALPGIMDDLRITVGWAWTYLVVAELVAANS------GLGYMILRAQRFLAIDR 224

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           I   ++ +  +  L D   +LL R +  WS K
Sbjct: 225 IFAGLIIIGVLGLLTDYLFKLLTRIITPWSEK 256


>gi|318061285|ref|ZP_07980006.1| ABC transporter permease protein [Streptomyces sp. SA3_actG]
 gi|318078276|ref|ZP_07985608.1| ABC transporter permease protein [Streptomyces sp. SA3_actF]
          Length = 303

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 98/254 (38%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R++ P +  ++  + V  I+    +    +   P  +   +        L  Y   +  R
Sbjct: 48  RKVLPPLISVVLVLAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIWTSVSR 107

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +++L+       L ++ R +   + PIL  +QS+P + ++   V++     P   
Sbjct: 108 GLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGLNSPMMY 167

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 168 A--------VILLGAVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPG 219

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I     +    G+G  +        +  +  A+  +L V
Sbjct: 220 YLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIV 277

Query: 252 IFLYDQLLFRPMIV 265
               D L+F P+  
Sbjct: 278 GIAIDLLIFSPLER 291



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 9/240 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    + W  V     +       G + + +T   +L  IW    ++ R +   ++A +
Sbjct: 61  LAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIW---TSVSRGLFGFLLALV 117

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I  P+G+ +     + + I P    L + P+  + P  V  +       +  +  +++ G
Sbjct: 118 IGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGL----NSPMMYAVILLG 173

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I   +++G    P  +     +   TG R   +I+LP   P Y+ G       +W 
Sbjct: 174 AVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWR 233

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           + + +E+ +         GLG  +       S   V L + ++    +A++  ++ PL  
Sbjct: 234 SLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 291


>gi|297203214|ref|ZP_06920611.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197711296|gb|EDY55330.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 305

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 98/258 (37%), Gaps = 10/258 (3%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +I P +  L   ++V  ++  ++    +   P  +            L  Y   +  R L
Sbjct: 52  KILPPVIALAVVLVVWTLLYPVVDDPSKLPSPAAVGSTFKDAWLAGDLLGYIWTSVSRGL 111

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                +LL       + A+ + +   + PIL  +QS+P + ++   V++           
Sbjct: 112 LGFFFALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA- 170

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   I    V ++   +   +  +P       R+   +G +  W++ +P ++PG V
Sbjct: 171 -------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWHVTLPAALPGYV 223

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +    +  W  ++A+E+I          G+G  +       D+  +  A+L +L V  
Sbjct: 224 AGLKQGWAFSWRSLMAAEIIA--QFPDLGVGLGQLLENGRTNSDMAMVFEAILLILFVGI 281

Query: 254 LYDQLLFRPMIVWSNKFR 271
             D L+F P+  W  + R
Sbjct: 282 AIDLLIFSPLERWVLRSR 299



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++    A +I  P+G+ +     I + I P    L + P+  + P 
Sbjct: 97  GDLLGYIWTSVSRGLLGFFFALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPP 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  F     +   TG +   +
Sbjct: 157 AVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWH 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 213 VTLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--QFPDLGVGLGQLLENGRTNSDMAMVF 270

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 271 EAILLILFVGIAIDLLIFSPLERWVLR 297


>gi|301050521|ref|ZP_07197397.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300297777|gb|EFJ54162.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
          Length = 354

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|283458841|ref|YP_003363485.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rothia
           mucilaginosa DY-18]
 gi|283134900|dbj|BAI65665.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Rothia mucilaginosa DY-18]
          Length = 280

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 10/209 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +           +     I+  RV++   I +++ + +G  IG    +     P    
Sbjct: 68  RVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGA 127

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L A P+  + PL++  +     +       L+  G  + +   V A  +       E A 
Sbjct: 128 LRAVPSLAWVPLLLLWIGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDPKLVEAAR 183

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F + G R +  + LP + P  V+G   A   AW   + +E+         + GLG  + 
Sbjct: 184 AFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLT 237

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +S   G    ++L ++ +       +  +
Sbjct: 238 DSQNNGRTDRLLLAIVALAVLGKITDALV 266



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 14/219 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  +V           L ++ + +T R+L    I  +   V   L   S  + ++ 
Sbjct: 62  QLPSPDRVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIA 121

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +  ++++P L ++   +++       KV    + A F ++T+        +  +L +
Sbjct: 122 APTIGALRAVPSLAWVPLLLLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAH 173

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L E +R+F L G + F  + +P  +P +V  + ++++  W F+VA+E++       
Sbjct: 174 VDPKLVEAARAFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLGAS---- 229

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              G+G  +  +        +L A++ +  +  + D L+
Sbjct: 230 --MGLGYLLTDSQNNGRTDRLLLAIVALAVLGKITDALV 266


>gi|220908632|ref|YP_002483943.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
 gi|219865243|gb|ACL45582.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
          Length = 294

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVI 380
            +    P+          ++  L ++W          +   S G ++  F        ++
Sbjct: 37  RLGEEIPKPLQTGLMITSLALPLVLWWAVTTLVKIDPVFLPSPGAVLAAFGRLWQSGDLL 96

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ RV V   +++++ IP+G+ +G    I + ++P   L+   PA  F PL++  
Sbjct: 97  KDTLASLGRVGVGFFLSALVSIPIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILY 156

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +             L+  GT ++    V+      P D  E               +ILP
Sbjct: 157 LGIG----EPPKIALIFMGTFFFNTLMVMDAVKFVPRDLIEATYMLGGNRREVLTQVILP 212

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            + P  +  +      AW   IVSE+ +       T GLG  I+ +       E+ +G++
Sbjct: 213 HVLPGILDASRINLAAAWQLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLI 266

Query: 561 IMCCFVLALNRFL 573
           ++    L+ +   
Sbjct: 267 VIGIIGLSFDLLF 279



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 95/246 (38%), Gaps = 15/246 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VL   +  ++         P  ++           L +    +  R+     +S L + 
Sbjct: 59  LVLWWAVTTLVKIDPVFLPSPGAVLAAFGRLWQSGDLLKDTLASLGRVGVGFFLSALVSI 118

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L      +  +L P+  +++ +P   F+   ++Y     P K        I  IF 
Sbjct: 119 PIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILYLGIGEPPK--------IALIFM 170

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              +  T  +  ++  +PRDL E +     +  +    + +P  +PG++    ++++  W
Sbjct: 171 GTFFFNTLMVMDAVKFVPRDLIEATYMLGGNRREVLTQVILPHVLPGILDASRINLAAAW 230

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             V+ SE+I          G+G  I++A +      I   ++ +  +   +D LLF+ ++
Sbjct: 231 QLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLIVIGIIGLSFD-LLFQYLL 283

Query: 265 VWSNKF 270
             + K+
Sbjct: 284 RITCKW 289


>gi|283833775|ref|ZP_06353516.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070436|gb|EFE08545.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 263

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 83/239 (34%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           R++          +  +A  + W S   + +     +  + +           I+ +R +
Sbjct: 11  RLAPWFLPLGLVAIWQIASSMGWLSTRILPSPEGVVEAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V   I   I + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  VGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S         G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 108/265 (40%), Gaps = 18/265 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
               F  L  V +  I + +     +    P  +V+          L Q+ + ++ R L 
Sbjct: 12  LAPWFLPLGLVAIWQIASSMGWLSTRILPSPEGVVEAFWTLSASGELWQHLAISSWRALV 71

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I          ++  SR    +L   + +++++P L  +   +++F           
Sbjct: 72  GFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID-------- 123

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++ 
Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          GIG     A +      ++ A++    +  L
Sbjct: 184 GVRFALGLMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237

Query: 255 YD---QLLFRPMIVWSNKFRLERTT 276
            D   QLL R  + W+  + ++  T
Sbjct: 238 ADVSAQLLERVWLRWNPAYHVKEAT 262


>gi|332999415|gb|EGK19000.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri VA-6]
          Length = 354

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGACSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 ALP-----PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGACSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|52424605|ref|YP_087742.1| ProW protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306657|gb|AAU37157.1| ProW protein [Mannheimia succiniciproducens MBEL55E]
          Length = 338

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +L+++   LL         A+S R   ++ P+LD MQ+ P   +L   V+ F 
Sbjct: 131 MMITLALVLTSVSFCLLIGLPLGIWMARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLFG 190

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +P  L E +++F  S  Q  + + 
Sbjct: 191 ---IGNVPGVVVTIIFA-----LPPIVRLTILGIQQVPEALIEAAQAFGASKKQLLYKVQ 242

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+      
Sbjct: 243 LPLAMPSIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGEAATG 295

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D+L
Sbjct: 296 GLGIVLMAIVLDRL 309



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 16/234 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIAS 398
           L++    V+  +   + WQ   + +   T   +  +  +G      IT+  V+  +    
Sbjct: 87  LNVLPPTVMIILFTLLVWQFTHFRLALATLLSITLIGAVGAWNEMMITLALVLTSVSFCL 146

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +P+GIW+      S+ ++P    +   PA V+   +V          N+   ++ I 
Sbjct: 147 LIGLPLGIWMARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTII 202

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I+   I G    P    E A +F  +  +    + LP   P  + G       + 
Sbjct: 203 FALPPIVRLTILGIQQVPEALIEAAQAFGASKKQLLYKVQLPLAMPSIMAGVNQTLMLSL 262

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ + + G       GLG  +     +    E   G L +    + L+R 
Sbjct: 263 SMVVIASMIAVG-------GLGQMVLRGIGRLDMGEAATGGLGIVLMAIVLDRL 309


>gi|325676528|ref|ZP_08156206.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|325552706|gb|EGD22390.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 280

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV++  ++  ++ + +G+  GF   +   I P  Q+L   P     PL +     
Sbjct: 84  AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + +  N+ AG  +      E A +  +  ++   +++LPG  
Sbjct: 144 G----EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGAL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G AW A IV+E  +         GLG  I  +        V+ G+L+  
Sbjct: 200 PQALTGLRMSLGVAWLALIVAEQIN------ADAGLGYLINNARIYFRIDIVIFGLLVYA 253

Query: 564 CFVLALNRFL 573
              LA +  +
Sbjct: 254 FLGLATDAIV 263



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 96/233 (41%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V          SL    + +  R+L   V+ +L   +   LA  SR + + + 
Sbjct: 60  LASPAQVVAAAAELWSDGSLQDALAVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAID 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P LG +   +++F           E   +F +    ++ +  +++  + +I
Sbjct: 120 PPIQMLRTVPFLGLIPLFIIWFGIG--------EQPKVFLVALGVLFPLYLNLFAGIRSI 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E + +  L+ +Q   ++ +P ++P  +  + MS+   W  ++ +E I        
Sbjct: 172 DGKLIEAAETLGLNKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAEQI------NA 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G  I  A     +  +++ +L    +    D   + L   ++ W   ++
Sbjct: 226 DAGLGYLINNARIYFRIDIVIFGLLVYAFLGLATDAIVRALEGRLLTWRKTYQ 278


>gi|254882041|ref|ZP_05254751.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides sp. 4_3_47FAA]
 gi|319640951|ref|ZP_07995659.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_40A]
 gi|254834834|gb|EET15143.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides sp. 4_3_47FAA]
 gi|317387396|gb|EFV68267.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_40A]
          Length = 274

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+     + I  + +    ++     I  I+ + L           +T   +LS+ +I+L
Sbjct: 41  LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        +A S+R   +L PILD+MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 IVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  +  Q  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    F V   +   +AW   G  V+ FT   +L +  +G       T+  V+   IIA
Sbjct: 40  ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I+ +P+GIW          + P   L+   PA V+    V       +       +   
Sbjct: 100 LIVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E + SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|295397940|ref|ZP_06807997.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Aerococcus viridans ATCC
           11563]
 gi|294973825|gb|EFG49595.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Aerococcus viridans ATCC
           11563]
          Length = 285

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 17/239 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            AF+L++ +I   ++  + +     +V +  I      L      T   +L + VIS++ 
Sbjct: 57  FAFILIVAVIAYFVNKKRLSLSAFALVGLGYIL--NQGLWSELMNTVTLVLVSSVISIII 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +AKS+ +  +L PILD MQ++P   +L   V +F     G V G   + IFA+
Sbjct: 115 GVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFG---IGIVPGTFASVIFAL 171

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  I  +L E + +F  +G QK + + +P +   ++  +  ++  
Sbjct: 172 PPTVRF-----TELGIKQISTELVEAADAFGSTGKQKLFKVELPLAKSTIMAGVNQTVML 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               VV + MI         PG+G  +  A++   + +   + L ++ +  L D+L  R
Sbjct: 227 ALSMVVTASMI-------GAPGLGRQVLTALQRASVGSGFVSGLAIVILAILIDRLTNR 278



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I    V+             + +    Y     +      T+  V+V  +I+ I
Sbjct: 54  IPPFAFILIVAVIAYFVNKKRLSLSAFALVGLGYILNQGLWSELMNTVTLVLVSSVISII 113

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW      + + ++P    +   PA V+    V+      +       +     
Sbjct: 114 IGVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFGIGIVPGTFASVIF---- 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G      +  E A +F  TG +    + LP      + G       A +
Sbjct: 170 ALPPTVRFTELGIKQISTELVEAADAFGSTGKQKLFKVELPLAKSTIMAGVNQTVMLALS 229

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + + +           GLG  +  + ++ S     +  L +    + ++R 
Sbjct: 230 MVVTASMIG-------APGLGRQVLTALQRASVGSGFVSGLAIVILAILIDRL 275


>gi|229826019|ref|ZP_04452088.1| hypothetical protein GCWU000182_01383 [Abiotrophia defectiva ATCC
           49176]
 gi|229789761|gb|EEP25875.1| hypothetical protein GCWU000182_01383 [Abiotrophia defectiva ATCC
           49176]
          Length = 266

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 10/210 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
              +  Y +   T  D   +I     ++   +    +   I +P+GI + +         
Sbjct: 50  VLNTFIYKLTGGTTPDGANLIEHILSSLKIALGGYGVGVFIGVPLGIAMAWSRKFERYAM 109

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   L+   PA  + PL++  +   +L+       ++ F        N   G        
Sbjct: 110 PLFNLIRPVPALAWIPLMILWLGIGYLSKVG----IIFFAAFISATINSYTGIKKTNQVH 165

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             VA +F  T  +    + +P   P   TG   A G +W A + +E+ +       T G+
Sbjct: 166 LWVARTFGATNRQMLFKVAIPTALPMIFTGLRLALGSSWVALVAAEMLA------ATRGV 219

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G  I      G    +++G++ +    L +
Sbjct: 220 GYMIYVGRMLGRPDIIIVGMITIGGIGLIM 249



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 82/199 (41%), Gaps = 14/199 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L ++   +    L    + +          A SR+     +P+ ++++ +P L ++
Sbjct: 65  DGANLIEHILSSLKIALGGYGVGVFIGVPLGIAMAWSRKFERYAMPLFNLIRPVPALAWI 124

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++    Y        L+ +  IF +   + T + Y  +    +    V+R+F  + 
Sbjct: 125 PLMILWLGIGY--------LSKVGIIFFAAFISATINSYTGIKKTNQVHLWVARTFGATN 176

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  + + +P ++P +   + +++   W  +VA+EM+          G+G  I +     
Sbjct: 177 RQMLFKVAIPTALPMIFTGLRLALGSSWVALVAAEMLA------ATRGVGYMIYVGRMLG 230

Query: 237 DLLAILYAMLTMLGVIFLY 255
               I+  M+T+ G+  + 
Sbjct: 231 RPDIIIVGMITIGGIGLIM 249


>gi|256831080|ref|YP_003159808.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
 gi|256580256|gb|ACU91392.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
          Length = 278

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 18/240 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQYASRTTLRMLSAMVIS 79
           L  + +   I ++  G+   T  R +     + L +     L      T   +L A + +
Sbjct: 45  LLLIPIPVFIVLVGAGVWFLTKERKLTLGSALGLALIWNMGLWTATVSTIALVLVATLCA 104

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +         AA S+    V++PILD+MQ++P   +L   + +F           + AAI
Sbjct: 105 IAIGVPLGICAAISKGTYRVVMPILDVMQTMPAFVYLIPAIPFFGLG--------KTAAI 156

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F+     +          +  IP +L E S +F  +  Q+ + L +P + P ++  +  +
Sbjct: 157 FSTVIFSMPPAIRFTCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQT 216

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      VV + MI          G+G  +  AI+   +     A + ++ V  + D++L
Sbjct: 217 VMLALSMVVIASMI-------GAKGLGGEVWKAIQRLQMGRGFEAGIAIVIVAMILDRVL 269



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 17/237 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
            L +    V   +     W               L +IW   +      T+  V+V  + 
Sbjct: 44  GLLLIPIPVFIVLVGAGVWFLTKERKLTLGSALGLALIWNMGLWTATVSTIALVLVATLC 103

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I +P+GI           + P   ++   PA V+    +  + ++ L     +   +
Sbjct: 104 AIAIGVPLGICAAISKGTYRVVMPILDVMQTMPAFVYL---IPAIPFFGLGKTAAIFSTV 160

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     I F    G    P +  E +++F  T  +    + LP   P  + G       
Sbjct: 161 IFSMPPAIRF-TCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQTVML 219

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A +  +++ +           GLG  + ++ ++          + +    + L+R L
Sbjct: 220 ALSMVVIASMIG-------AKGLGGEVWKAIQRLQMGRGFEAGIAIVIVAMILDRVL 269


>gi|298529248|ref|ZP_07016651.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510684|gb|EFI34587.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
          Length = 278

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    + T   ++ A +I++        +A  S  +  ++ PILD MQ++P   +L   
Sbjct: 87  GLWTATASTLSLVVVATLIAIAIGIPLGIIAGLSDWVYRIVRPILDFMQTLPAFVYLIPA 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           ++AAIFA     +          +  +P++L E + +F    WQK
Sbjct: 147 IPFFGLG--------KVAAIFATVVFSMPPAIRFTNLGIRQVPKELTECADAFGADRWQK 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +   ++  +  ++      VV + MI  G       G+G  +  AI+     
Sbjct: 199 LFKIQLPLAKTTIMGGVNQTVMLALSMVVIAAMIGAG-------GLGGEVWRAIQRLQPG 251

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           A   A + ++ +  + D+LL
Sbjct: 252 AGFEAGIGIVILAIILDRLL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 11/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  VVV  +IA  I IP+GI  G    +   ++P    +   PA V+    +  + +
Sbjct: 93  ASTLSLVVVATLIAIAIGIPLGIIAGLSDWVYRIVRPILDFMQTLPAFVYL---IPAIPF 149

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L     +   ++F     I F    G    P +  E A +F    W+    I LP   
Sbjct: 150 FGLGKVAAIFATVVFSMPPAIRF-TNLGIRQVPKELTECADAFGADRWQKLFKIQLPLAK 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G       A +  +++ +   G       GLG  +  + ++          + + 
Sbjct: 209 TTIMGGVNQTVMLALSMVVIAAMIGAG-------GLGGEVWRAIQRLQPGAGFEAGIGIV 261

Query: 564 CFVLALNRFL 573
              + L+R L
Sbjct: 262 ILAIILDRLL 271


>gi|154245158|ref|YP_001416116.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159243|gb|ABS66459.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 315

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 99/264 (37%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++ + P    L    +     ++     +    P D+      TL   +L      +T 
Sbjct: 59  LAKSLAPWALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTG 118

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L+ + I     F    L    +     L   L +++++P L  +   +++F       
Sbjct: 119 RALTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIG---- 174

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +     + +  + Y  + N+   L E++R + LS    F  + +P ++P
Sbjct: 175 ----EEAKIFLVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALP 230

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++  +L    
Sbjct: 231 SVLVGLRYALGIMWLTLIVAETIS------STEGIGYMTMNAREFLQTDVVVLGVLAYAL 284

Query: 251 VIFLYDQL---LFRPMIVWSNKFR 271
           +  L D L   + +  + W+  ++
Sbjct: 285 LGKLADSLTRGIEQRALAWNPAYQ 308



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 80/237 (33%), Gaps = 22/237 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIW----------LGCITMFRVVVLII 395
           W   +  +A+  A  S+G++ +       DV    W            C++  R +  + 
Sbjct: 66  WALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRALTGLA 125

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   I   +G+  G      + +    Q+L   P     PLV+                L
Sbjct: 126 IGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIG----EEAKIFL 181

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + I  N   G         E+A  + ++    +  I+LPG  P  + G   A G
Sbjct: 182 VAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYALG 241

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             W   IV+E  S       T G+G     + E      VVLGVL         +  
Sbjct: 242 IMWLTLIVAETIS------STEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSL 292


>gi|254387391|ref|ZP_05002638.1| glycine betaine ABC transport system permease [Streptomyces sp.
           Mg1]
 gi|194346183|gb|EDX27149.1| glycine betaine ABC transport system permease [Streptomyces sp.
           Mg1]
          Length = 598

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 92/233 (39%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L++  I  +        +   +       +D   L   A  T   +L A +I+L+ +  
Sbjct: 48  PLLLAGILAVAAWWLRGLLAALLAMAGFALVDSIGLWDEAMSTLSLVLVATLITLVISVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A++S R+  VL P+LD MQ++P + +L   +++F     G V G     IF++   
Sbjct: 108 LGIWASRSDRVSAVLRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFSLPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDGELVEAADAFGTTPRDTLVRVQLPLALPTIMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+  G            +  AI   D+     A ++++ +    D++
Sbjct: 220 MVVIAGMVGGGGLGGA-------VYKAIGNVDIGLGFEAGISIVILAMYLDRM 265



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 60/180 (33%), Gaps = 9/180 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++ G+    AW   G +           V  +G       T+  V+V  +I  +I +P+
Sbjct: 49  LLLAGILAVAAWWLRGLLAALLAMAGFALVDSIGLWDEAMSTLSLVLVATLITLVISVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +S+ ++P    +   PA V+    +       +   +   +     +    
Sbjct: 109 GIWASRSDRVSAVLRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----SLPPG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T       + LP   P  + G         +  +++
Sbjct: 165 VRMTELGIRQVDGELVEAADAFGTTPRDTLVRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224


>gi|126641490|ref|YP_001084474.1| ABC taurine transporter permease subunit [Acinetobacter baumannii
           ATCC 17978]
          Length = 204

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +I A +I +P+G+W+G    + + + P  +LL   P   + PL+V     
Sbjct: 10  AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 69

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+ F     ++ +   G  +   + +  A S   +  + + ++ILP   
Sbjct: 70  GETTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 125

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +TG     G  W+  + SE+ +         G+G  +  + +      V+LG++++ 
Sbjct: 126 PHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 179

Query: 564 CFVLALNRFL 573
              ++   FL
Sbjct: 180 IVAVSFELFL 189



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R+  A++ +++           ++ +  VL P++++++ IP L +L  
Sbjct: 3   ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 62

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   +  IF S +  +  S    + +   + E  + S   S  Q
Sbjct: 63  LVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQ 114

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW++ +P ++P ++  + + +  GW  +VASE++          GIG  +  A +    
Sbjct: 115 VFWHVILPTALPHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLIT 168

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  ++ +  V   ++  L
Sbjct: 169 DTVILGIIVIAIVAVSFELFL 189


>gi|167761037|ref|ZP_02433164.1| hypothetical protein CLOSCI_03435 [Clostridium scindens ATCC 35704]
 gi|167661271|gb|EDS05401.1| hypothetical protein CLOSCI_03435 [Clostridium scindens ATCC 35704]
          Length = 267

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+  RV     +A +  + +G   G  P +     P  Q L A P   + PL +     
Sbjct: 69  LISTLRVGKGFYVAGVTGMILGFLTGRVPLLRKMCDPMIQALRAVPGIGYLPLGMVWFGV 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N       L+     + +  N   GAS  P  +              +  +I P  F
Sbjct: 129 GEEN----TLFLISLAAFFPVYLNTQEGASRVPEIYIRAGKMLGAKKMILFFTVIFPAAF 184

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + + G   A G +W   ++ E+         T G+GA + +    G    V+  ++++ 
Sbjct: 185 SHVIVGLRLALGVSWAYLVLGEM------TGVTKGIGAIMMDGRMLGHVDIVLACMVVIA 238

Query: 564 CFVLALN 570
                 +
Sbjct: 239 ITGKFCD 245



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +    +TLR+     ++ +   +   L  +   L  +  P++  ++++P +G+L  
Sbjct: 62  GKMLENLLISTLRVGKGFYVAGVTGMILGFLTGRVPLLRKMCDPMIQALRAVPGIGYLPL 121

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F           E   +F I  +  + +  +  +    +P       +        
Sbjct: 122 GMVWFGVG--------EENTLFLISLAAFFPVYLNTQEGASRVPEIYIRAGKMLGAKKMI 173

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ +  P +   ++  + +++   W ++V  EM  V        GIG+ +        +
Sbjct: 174 LFFTVIFPAAFSHVIVGLRLALGVSWAYLVLGEMTGV------TKGIGAIMMDGRMLGHV 227

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  M+ +       D +L
Sbjct: 228 DIVLACMVVIAITGKFCDWIL 248


>gi|256019540|ref|ZP_05433405.1| glycine betaine transporter membrane protein [Shigella sp. D9]
 gi|332280664|ref|ZP_08393077.1| glycine betaine/L-proline transport system permease proW [Shigella
           sp. D9]
 gi|332103016|gb|EGJ06362.1| glycine betaine/L-proline transport system permease proW [Shigella
           sp. D9]
          Length = 354

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|86747435|ref|YP_483931.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86570463|gb|ABD05020.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 277

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+   +  A  + +P+GI +G    +        Q L       + P+ V   + + 
Sbjct: 87  SLGRIAGGLAWAIALGVPLGILVGRFRGMREASSVPFQFLRMISPLAWMPIAVMAFASW- 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N  +  L+     W ILF+   G       + +VA +     W     II+P I   
Sbjct: 146 ---NAAIVFLIGVAAIWPILFSTAHGFRRIDPAWFKVARNLGARPWHMLFTIIVPAIMQD 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G AW   + +E          T+GLG  I ++ +   +  +   V+I+   
Sbjct: 203 SLAGIRLAVGVAWIVLVPAEFLG------VTSGLGYAINDARDTLEYDRLAATVVIIGLI 256

Query: 566 VLALN 570
             AL+
Sbjct: 257 GFALD 261



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 14/218 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P+   + +   L      + A  +  R+   +  ++        L  + R +       
Sbjct: 63  APQPTFERLWQMLISGEAAKMAWPSLGRIAGGLAWAIALGVPLGILVGRFRGMREASSVP 122

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              ++ I  L ++   V+ F +           A +F I  + +W + FS       I  
Sbjct: 123 FQFLRMISPLAWMPIAVMAFASW--------NAAIVFLIGVAAIWPILFSTAHGFRRIDP 174

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              +V+R+     W   + + VP  M   +  + +++   W  +V +E + V        
Sbjct: 175 AWFKVARNLGARPWHMLFTIIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLGV------TS 228

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G+G  I  A    +   +   ++ +  + F  D L  R
Sbjct: 229 GLGYAINDARDTLEYDRLAATVVIIGLIGFALDFLCER 266


>gi|271501462|ref|YP_003334488.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270345017|gb|ACZ77782.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 286

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 23/274 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVL 377
             +R H P        + R+ + L + +F +  G+   + +  +    ++ N  T     
Sbjct: 21  APVRVHNPLMVPLRPVSMRLRWTLGVGFFVLFIGLWSLVTFSGVVSATFLANPLTMLHEG 80

Query: 378 YVIWL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +++          +T+ RVV   ++A++I +P+GI +G    + +  +PF       PA
Sbjct: 81  VLLFTDYDFQQDIGMTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPA 140

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           + F PL++       +       L++  G+ + I+  V         D  E A +   + 
Sbjct: 141 SAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSS 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 +++PG  P          G AW   IV+E+         ++G+G  I +S    
Sbjct: 197 RSVVTRVLIPGAAPGIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDSQALL 250

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW---HPLYLYG 581
           +  +++ G++++    L  +         L+ + 
Sbjct: 251 NTGQIIFGIIVIGVIGLLSDFLFKAVNRRLFAWS 284



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 92/250 (36%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F+ +  ++    +        P  ++    +    +   Q    T +R+++  +++ 
Sbjct: 49  FVLFIGLWSLVTFSGVVSATFLANPLTMLHEGVLLFTDYDFQQDIGMTVMRVVAGFLLAA 108

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L    + +     P +   + +P   F+   +++            E+  I 
Sbjct: 109 LIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKIL 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  S+    RDL E + +   S       + +P + PG+   + + +
Sbjct: 161 VIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVTRVLIPGAAPGIAELLRLVL 220

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  L D L  
Sbjct: 221 GWAWTYVIVAELIGASS------GIGHMIVDSQALLNTGQIIFGIIVIGVIGLLSDFLFK 274

Query: 259 -LFRPMIVWS 267
            + R +  WS
Sbjct: 275 AVNRRLFAWS 284


>gi|317486678|ref|ZP_07945495.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922061|gb|EFV43330.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 258

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+V   ++A  I IP+G+ +G      + I P  +++   P   + P+ V     + 
Sbjct: 67  SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVI----FW 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + +  +   G  + ++ N++ G  +    +   A S   +    + +I+LPG  P 
Sbjct: 123 PTPEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPS 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            V G     G  W   + +E+ +        TGLG     +   G FP
Sbjct: 183 IVVGMTVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 15/223 (6%)

Query: 18  NIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            I  ++ F +V  I   L +  I     P  ++  +   L           + +R++   
Sbjct: 16  GIISIIVFTVVWEICTRLHVPIIGNVPAPSSVIGSMGKQLTDAFYWISWRDSMMRIVGGF 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V++         L   S+    ++ P+ +IM+ +P L ++   V+++           E+
Sbjct: 76  VLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVIFW--------PTPEM 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +F  F    + +  ++   + +I       +RS   S    FW++ +P S+P +V  M
Sbjct: 128 SMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPSIVVGM 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + M   W  VVA+EMI          G+G     A    +  
Sbjct: 188 TVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224


>gi|329928157|ref|ZP_08282103.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328938034|gb|EGG34433.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 258

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 10/227 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  +       I    +      +       +I    I+ +RV++     S++ IPVGI
Sbjct: 21  VWHLLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGI 80

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            IG    I +  +PF   +   P   F  L +        +      +L+++ T + ++ 
Sbjct: 81  MIGKVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIGETSK----IMLILYATFFIVVL 136

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G  +   D    A S   + W+   ++++P   P+  TG   A G ++ A I +E+
Sbjct: 137 NTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAEM 196

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         G+G  I  S        + +G++ +       +R +
Sbjct: 197 IA------SNEGVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  L +G +    P          L   +L QY   ++ R+L       L       +  
Sbjct: 24  LLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGIMIG 83

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           K   +     P L+ ++ IP + F+T  +V+F           E + I  I  +  + + 
Sbjct: 84  KVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIG--------ETSKIMLILYATFFIVV 135

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + ++  D    +RS   S WQ   ++ +P ++P +   + ++M   +  ++ +E
Sbjct: 136 LNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAE 195

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI   +      G+G  I  +        I   ++ +  + FL D+ +
Sbjct: 196 MIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237


>gi|302557597|ref|ZP_07309939.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
 gi|302475215|gb|EFL38308.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
          Length = 304

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 12/260 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINI--LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +I P +  +   + V   +    ++    +   P  + D+         L  Y   +  R
Sbjct: 49  KILPPVIAVALVLAVWQALVSFRIVDDPSKLPAPGAVWDVAQRAWLQGELLGYIWTSVSR 108

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L     +LL       L A+ + +   + PIL  +QS+P + ++   V++         
Sbjct: 109 GLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIWLGLNNQMMY 168

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 169 A--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPG 220

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I          G+G  +       D+  +  A+L +L V
Sbjct: 221 YVAGLKQGWAFSWRSLMAAEIIA--SFPDLGVGLGQLLENGRNASDMAMVFEAILLILTV 278

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
               D L+F P+  W  + R
Sbjct: 279 GIAIDLLIFSPLERWVLRSR 298



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++    A +I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 96  GELLGYIWTSVSRGLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 155

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  F     +   TG +   +
Sbjct: 156 AVIWLGL----NNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWH 211

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 212 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 269

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 270 EAILLILTVGIAIDLLIFSPLERWVLR 296


>gi|256112111|ref|ZP_05453047.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|265993550|ref|ZP_06106107.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764420|gb|EEZ10452.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 246

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 82/234 (35%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 87/232 (37%), Gaps = 14/232 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L    R    ++ P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236


>gi|157159883|ref|YP_001457201.1| taurine transporter subunit [Escherichia coli HS]
 gi|157065563|gb|ABV04818.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           HS]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|24111695|ref|NP_706205.1| taurine transporter subunit [Shigella flexneri 2a str. 301]
 gi|30061820|ref|NP_835991.1| taurine transporter subunit [Shigella flexneri 2a str. 2457T]
 gi|110804390|ref|YP_687910.1| taurine transporter subunit [Shigella flexneri 5 str. 8401]
 gi|157157564|ref|YP_001461542.1| taurine transporter subunit [Escherichia coli E24377A]
 gi|191166752|ref|ZP_03028579.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|193065230|ref|ZP_03046303.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E22]
 gi|193068646|ref|ZP_03049607.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|209917580|ref|YP_002291664.1| taurine transporter subunit [Escherichia coli SE11]
 gi|218552930|ref|YP_002385843.1| taurine transporter subunit [Escherichia coli IAI1]
 gi|256020340|ref|ZP_05434205.1| taurine transporter subunit [Shigella sp. D9]
 gi|260842571|ref|YP_003220349.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str.
           12009]
 gi|260853593|ref|YP_003227484.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str.
           11368]
 gi|300818312|ref|ZP_07098523.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300820398|ref|ZP_07100550.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|307312253|ref|ZP_07591889.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|309794911|ref|ZP_07689332.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312970457|ref|ZP_07784638.1| taurine transport system permease protein tauC [Escherichia coli
           1827-70]
 gi|331666715|ref|ZP_08367589.1| taurine transport system permease protein TauC [Escherichia coli
           TA271]
 gi|331676031|ref|ZP_08376743.1| taurine transport system permease protein TauC [Escherichia coli
           H591]
 gi|332281511|ref|ZP_08393924.1| taurine uptake ABC transporter [Shigella sp. D9]
 gi|24050472|gb|AAN41912.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30040062|gb|AAP15796.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110613938|gb|ABF02605.1| taurine transport system permease protein [Shigella flexneri 5 str.
           8401]
 gi|157079594|gb|ABV19302.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|190903263|gb|EDV62985.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|192927204|gb|EDV81825.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E22]
 gi|192958009|gb|EDV88451.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|209910839|dbj|BAG75913.1| taurine ABC transporter permease component [Escherichia coli SE11]
 gi|218359698|emb|CAQ97239.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|257752242|dbj|BAI23744.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str.
           11368]
 gi|257757718|dbj|BAI29215.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str.
           12009]
 gi|281599613|gb|ADA72597.1| Taurine transport system permease protein [Shigella flexneri
           2002017]
 gi|300527183|gb|EFK48252.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529203|gb|EFK50265.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|306907755|gb|EFN38257.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|308121564|gb|EFO58826.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|310337106|gb|EFQ02244.1| taurine transport system permease protein tauC [Escherichia coli
           1827-70]
 gi|313646668|gb|EFS11127.1| taurine transport system permease protein tauC [Shigella flexneri
           2a str. 2457T]
 gi|315059650|gb|ADT73977.1| taurine transporter subunit [Escherichia coli W]
 gi|323152103|gb|EFZ38397.1| taurine transport system permease protein tauC [Escherichia coli
           EPECa14]
 gi|323171143|gb|EFZ56792.1| taurine transport system permease protein tauC [Escherichia coli
           LT-68]
 gi|323184807|gb|EFZ70178.1| taurine transport system permease protein tauC [Escherichia coli
           1357]
 gi|323379786|gb|ADX52054.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|324016636|gb|EGB85855.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116853|gb|EGC10766.1| inner membrane transport system [Escherichia coli E1167]
 gi|331065939|gb|EGI37823.1| taurine transport system permease protein TauC [Escherichia coli
           TA271]
 gi|331076089|gb|EGI47371.1| taurine transport system permease protein TauC [Escherichia coli
           H591]
 gi|332103863|gb|EGJ07209.1| taurine uptake ABC transporter [Shigella sp. D9]
 gi|332761613|gb|EGJ91893.1| taurine transport system permease protein tauC [Shigella flexneri
           4343-70]
 gi|332764415|gb|EGJ94648.1| taurine transport system permease protein tauC [Shigella flexneri
           K-671]
 gi|333008725|gb|EGK28189.1| taurine transport system permease protein tauC [Shigella flexneri
           K-218]
 gi|333022109|gb|EGK41352.1| taurine transport system permease protein tauC [Shigella flexneri
           K-304]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (260), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|325964279|ref|YP_004242185.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470366|gb|ADX74051.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 315

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+   + +  +   L +    +  R L   VIS+        L A+   L     P
Sbjct: 89  PGPLDVATQMGVLWNEGKLQEAVWTSLQRGLVGFVISVTIATPVGLLLAQVAPLRRAFGP 148

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +Q +P + ++   +++F           +    F IF   + ++   +   +  IP
Sbjct: 149 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVIFMGAIPSIINGLISGVDQIP 200

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V      S  +    + +P ++PG +  +    +  W  ++A+E+I VG T+   
Sbjct: 201 PQYRRVGTVLGASRLEMALQIILPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGTIG-- 258

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+GS +       D+  ++ A+L +L V  L + L+F P+
Sbjct: 259 FGLGSLLDQGRILSDMTVVMSAILLILAVGILIELLVFAPI 299



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 6/192 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +V  +I+  I  PVG+ +     +     P    L   P+  + P  +       
Sbjct: 114 SLQRGLVGFVISVTIATPVGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 173

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  ++  G    I+  +I+G    P  ++ V +    +       IILP   P 
Sbjct: 174 AT----VYFVIFMGAIPSIINGLISGVDQIPPQYRRVGTVLGASRLEMALQIILPAALPG 229

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ + G       GLG+ + +         V+  +L++   
Sbjct: 230 YLGGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSLLDQGRILSDMTVVMSAILLILAV 287

Query: 566 VLALNRFLWHPL 577
            + +   ++ P+
Sbjct: 288 GILIELLVFAPI 299


>gi|301065292|ref|YP_003787315.1| taurine transport system permease tauC [Lactobacillus casei str.
           Zhang]
 gi|300437699|gb|ADK17465.1| taurine transport system permease protein tauC [Lactobacillus casei
           str. Zhang]
          Length = 260

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV V +  A I+ IP+G++  +   I S I P  Q L   P   ++ L++  +  
Sbjct: 67  LLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLILWLGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I        S    +++  A+S     W+ +  +I P   
Sbjct: 127 GEASK----VLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRVIFPASL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++ +++M 
Sbjct: 183 PAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIVDIVVMG 236

Query: 564 CFVLALNRFL 573
              + L+ FL
Sbjct: 237 ITGMLLDWFL 246



 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 81/198 (40%), Gaps = 14/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+   T  R+  A+  +++        ++ +  +G ++ PI+  ++ IP L + T  ++
Sbjct: 63  WQHYLLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLIL 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E + +  +F S +  +  + Y ++  I  +    + S   + WQ F 
Sbjct: 123 WLGIG--------EASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFL 174

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P S+P ++  +  ++   +  +V++EMI          GIG  +  A        +
Sbjct: 175 RVIFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVM 228

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  ++ M     L D  L
Sbjct: 229 IVDIVVMGITGMLLDWFL 246


>gi|300790728|ref|YP_003771019.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299800242|gb|ADJ50617.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 316

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 13/271 (4%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC---GVAIGIAWQ 362
           +SPL            +     P +     +   +S+ +    + V+     V       
Sbjct: 44  WSPLPRRAGLKPSASPLFSLRAPISAASRWTLAVLSFAVPFLAWVVLSVSGAVDATFLPS 103

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
               +           +      T  RV+    +A ++ +P+GI +G      +  +P  
Sbjct: 104 PAAVLKAGIDMASTGELFDDLWTTTQRVLEGFGLAVLVSVPLGILMGSFTAGQAFFEPLI 163

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            LL   PA+ F PL++  +     +       ++  GT ++            PN   +V
Sbjct: 164 GLLRYLPASAFIPLLIIWLGLGEPSK----IAILFIGTVFFNTLMTADVVRGVPNSLIDV 219

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + +         R I++P   P  +         AWN  +V+E+ +       + GLG  
Sbjct: 220 SYTLGARRGEVLRKIVVPHSLPGMIDAIRVNAAAAWNFVVVAELIN------SSAGLGYR 273

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I  +       ++   ++++    LA++  L
Sbjct: 274 IVRAQRFLQTDKIFAVLVVIGIAGLAIDVLL 304



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 87/248 (35%), Gaps = 20/248 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE------TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + + L      +  +  ++  +           P  ++           L      TT R
Sbjct: 71  SRWTLAVLSFAVPFLAWVVLSVSGAVDATFLPSPAAVLKAGIDMASTGELFDDLWTTTQR 130

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    +++L +     L            P++ +++ +P   F+   +++     P K 
Sbjct: 131 VLEGFGLAVLVSVPLGILMGSFTAGQAFFEPLIGLLRYLPASAFIPLLIIWLGLGEPSK- 189

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +F   V+  T      +  +P  L +VS +      +    + VP S+PG
Sbjct: 190 -------IAILFIGTVFFNTLMTADVVRGVPNSLIDVSYTLGARRGEVLRKIVVPHSLPG 242

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++ +  W FVV +E+I          G+G  I  A +      I   ++ +   
Sbjct: 243 MIDAIRVNAAAAWNFVVVAELINSSA------GLGYRIVRAQRFLQTDKIFAVLVVIGIA 296

Query: 252 IFLYDQLL 259
               D LL
Sbjct: 297 GLAIDVLL 304


>gi|222055582|ref|YP_002537944.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564871|gb|ACM20843.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 263

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITM 387
                  N+    +  + W  V     +   + +   +V    ++  +   ++    +++
Sbjct: 11  WSWSSWFNRSSVLIFFVAWELVPRAGGLLETFIAPPSVVLKTLWEILNSGELLGHVGVSL 70

Query: 388 FRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            R     + AS++ IP+G  +G     +   I P  + L        FPL +       L
Sbjct: 71  SRTASGFLAASLVAIPLGFLLGGSFRTLERLINPVLRFLGQLNPFSLFPLFIMLFGIGEL 130

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       ++ +   W ILFN I G         + A S        +  +ILP   P  
Sbjct: 131 SKGA----MIFWVCIWPILFNTINGVKEIDPLLIKSARSMGTGIVTLFFKVILPAAAPGI 186

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G     G A+   I +E+         + GLG  +  +      P++    + +    
Sbjct: 187 FLGLKMGSGTAFFMLIAAEMIG------ASRGLGWLVWNAQINFQIPQLFAATVTISVLG 240

Query: 567 LALNRFL 573
           LALN   
Sbjct: 241 LALNGIF 247



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 19/271 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVH 59
           M+     P   S   + N   +L F +   ++      ++    P  +V       L+  
Sbjct: 1   MWKNTEKPSLWSWSSWFNRSSVLIFFVAWELVPRAGGLLETFIAPPSVVLKTLWEILNSG 60

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTF 118
            L  +   +  R  S  + + L       L   S R L  ++ P+L  +  +        
Sbjct: 61  ELLGHVGVSLSRTASGFLAASLVAIPLGFLLGGSFRTLERLINPVLRFLGQLNPFSLFPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F           EL+    IF   +W + F+    +  I   L + +RS       
Sbjct: 121 FIMLFGIG--------ELSKGAMIFWVCIWPILFNTINGVKEIDPLLIKSARSMGTGIVT 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P + PG+   + M     +F ++A+EMI          G+G  +  A     +
Sbjct: 173 LFFKVILPAAAPGIFLGLKMGSGTAFFMLIAAEMIGAS------RGLGWLVWNAQINFQI 226

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             +  A +T+  +    +    ++ R ++ W
Sbjct: 227 PQLFAATVTISVLGLALNGIFAIIERALLGW 257


>gi|15800097|ref|NP_286109.1| taurine transporter subunit [Escherichia coli O157:H7 EDL933]
 gi|15829675|ref|NP_308448.1| taurine transporter subunit [Escherichia coli O157:H7 str. Sakai]
 gi|168749817|ref|ZP_02774839.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756896|ref|ZP_02781903.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761559|ref|ZP_02786566.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168768305|ref|ZP_02793312.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776340|ref|ZP_02801347.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783220|ref|ZP_02808227.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786200|ref|ZP_02811207.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168800237|ref|ZP_02825244.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195938570|ref|ZP_03083952.1| taurine transporter subunit [Escherichia coli O157:H7 str. EC4024]
 gi|208806945|ref|ZP_03249282.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815515|ref|ZP_03256694.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208823125|ref|ZP_03263443.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398897|ref|YP_002269008.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|218703651|ref|YP_002411170.1| taurine transporter subunit [Escherichia coli UMN026]
 gi|254791547|ref|YP_003076384.1| taurine transporter subunit [Escherichia coli O157:H7 str. TW14359]
 gi|261223846|ref|ZP_05938127.1| taurine transporter subunit, membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256054|ref|ZP_05948587.1| taurine transporter subunit, membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291281274|ref|YP_003498092.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           [Escherichia coli O55:H7 str. CB9615]
 gi|293403487|ref|ZP_06647578.1| taurine transporter subunit [Escherichia coli FVEC1412]
 gi|298379098|ref|ZP_06988979.1| taurine transporter subunit [Escherichia coli FVEC1302]
 gi|300900424|ref|ZP_07118594.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|12513208|gb|AAG54717.1|AE005216_5 taurine transport system permease protein [Escherichia coli O157:H7
           str. EDL933]
 gi|13359878|dbj|BAB33844.1| taurine transport system permease protein [Escherichia coli O157:H7
           str. Sakai]
 gi|187768289|gb|EDU32133.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015903|gb|EDU54025.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999409|gb|EDU68395.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189355970|gb|EDU74389.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362454|gb|EDU80873.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368092|gb|EDU86508.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373670|gb|EDU92086.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189377398|gb|EDU95814.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208726746|gb|EDZ76347.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732163|gb|EDZ80851.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208737318|gb|EDZ85002.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160297|gb|ACI37730.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209744494|gb|ACI70554.1| taurine transport system permease protein [Escherichia coli]
 gi|209744496|gb|ACI70555.1| taurine transport system permease protein [Escherichia coli]
 gi|209744498|gb|ACI70556.1| taurine transport system permease protein [Escherichia coli]
 gi|209744500|gb|ACI70557.1| taurine transport system permease protein [Escherichia coli]
 gi|209744502|gb|ACI70558.1| taurine transport system permease protein [Escherichia coli]
 gi|218430748|emb|CAR11622.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|254590947|gb|ACT70308.1| taurine transporter subunit, membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|284920175|emb|CBG33234.1| taurine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761147|gb|ADD55108.1| ABC-type nitrate/sulfonate/bicarbonate transpo rt system, permease
           component [Escherichia coli O55:H7 str. CB9615]
 gi|291429340|gb|EFF02360.1| taurine transporter subunit [Escherichia coli FVEC1412]
 gi|298280211|gb|EFI21715.1| taurine transporter subunit [Escherichia coli FVEC1302]
 gi|300356070|gb|EFJ71940.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|320192777|gb|EFW67417.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. EC1212]
 gi|320638358|gb|EFX08072.1| taurine transporter subunit [Escherichia coli O157:H7 str. G5101]
 gi|320643739|gb|EFX12862.1| taurine transporter subunit [Escherichia coli O157:H- str. 493-89]
 gi|320649089|gb|EFX17667.1| taurine transporter subunit [Escherichia coli O157:H- str. H 2687]
 gi|320655982|gb|EFX23898.1| taurine transporter subunit [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320662539|gb|EFX29928.1| taurine transporter subunit [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665109|gb|EFX32202.1| taurine transporter subunit [Escherichia coli O157:H7 str. LSU-61]
 gi|326341125|gb|EGD64917.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. 1044]
 gi|326346100|gb|EGD69839.1| Taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. 1125]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|242239080|ref|YP_002987261.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242131137|gb|ACS85439.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 263

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 91/216 (42%), Gaps = 17/216 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q+ S +T R L+   I          +   SR    +L   + +++++P L  +  
Sbjct: 56  GELWQHLSISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPL 115

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E A IF +    ++ +  + Y  + +I   L E++RS+ LSG++
Sbjct: 116 VILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFR 167

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  +  S+   W  ++ +E I          GIG     A +    
Sbjct: 168 LFREVLLPGALPSIMVGVRFSLGLMWLTLIVAETISANA------GIGYLAMNAREFLQT 221

Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             ++ A++    +  L D +   L R  + W   ++
Sbjct: 222 NVVVVAIILYALLGKLADVIALALERIWLRWHPSWQ 257



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ +R +    I   + + +G   G        +    Q+L   P     PLV+      
Sbjct: 64  ISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVILWFGI- 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT + I  N   G     +   E+A S+ ++G+R +R ++LPG  P
Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFRLFREVLLPGALP 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G  W   IV+E  S         G+G     + E      VV+ +++   
Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTNVVVVAIILYAL 233

Query: 565 FVLALNRF 572
                +  
Sbjct: 234 LGKLADVI 241


>gi|116749077|ref|YP_845764.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116698141|gb|ABK17329.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 231

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 107/245 (43%), Gaps = 14/245 (5%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++  L  G +     + I+       +   L +Y   +  R+     +++L       L 
Sbjct: 1   MVGSLWSGTEHLPGIQQILAAFWELANNGVLLRYTVASLFRVTVGFYLAVLLAVPLGLLL 60

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            +   +     P++  ++ I  L ++ F +++F           +  A+F IF +  + M
Sbjct: 61  GRQALIHQCTNPVIQFLRPISPLAWIPFAMLWFGIG--------DKPALFIIFIASFFPM 112

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             S  ++  +I     +V+ + + S W+  +Y+ +P  +PG+V  + +++   W  VVA+
Sbjct: 113 LISTVKAAASIHPMYFQVAANLQFSVWESVYYVILPACLPGIVLALRVTLGVSWMVVVAA 172

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           EMI V        G+G  I  A     L  ++ AM+T+  +  L D  + +   + + ++
Sbjct: 173 EMIAVKS------GLGYLIIDARNALRLDYVVVAMITIGVIGLLLDYFMTKLEGMEAVRW 226

Query: 271 RLERT 275
           RLE+ 
Sbjct: 227 RLEQK 231



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   ++     ++FRV V   +A ++ +P+G+ +G +  I     P  Q L       
Sbjct: 25  LANNGVLLRYTVASLFRVTVGFYLAVLLAVPLGLLLGRQALIHQCTNPVIQFLRPISPLA 84

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P  +                ++   + + +L + +  A++    + +VA++   + W 
Sbjct: 85  WIPFAMLWFGIGDK----PALFIIFIASFFPMLISTVKAAASIHPMYFQVAANLQFSVWE 140

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              Y+ILP   P  V       G +W   + +E+ +        +GLG  I ++      
Sbjct: 141 SVYYVILPACLPGIVLALRVTLGVSWMVVVAAEMIA------VKSGLGYLIIDARNALRL 194

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             VV+ ++ +    L L+ F+
Sbjct: 195 DYVVVAMITIGVIGLLLDYFM 215


>gi|24113982|ref|NP_708492.1| glycine betaine transporter membrane protein [Shigella flexneri 2a
           str. 301]
 gi|30064045|ref|NP_838216.1| glycine betaine transporter membrane protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806689|ref|YP_690209.1| glycine betaine transporter membrane protein [Shigella flexneri 5
           str. 8401]
 gi|24053095|gb|AAN44199.1| glycine betaine/L-proline transport system permease protein
           [Shigella flexneri 2a str. 301]
 gi|30042301|gb|AAP18026.1| glycine betaine/L-proline transport system permease protein
           [Shigella flexneri 2a str. 2457T]
 gi|110616237|gb|ABF04904.1| high-affinity transport system for glycine betaine and proline
           [Shigella flexneri 5 str. 8401]
 gi|281602054|gb|ADA75038.1| putative ABC-type proline/glycine betaine transport system,
           permease component [Shigella flexneri 2002017]
 gi|313648328|gb|EFS12772.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 2a str. 2457T]
 gi|332753396|gb|EGJ83776.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 4343-70]
 gi|332753903|gb|EGJ84278.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-671]
 gi|332755699|gb|EGJ86062.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri 2747-71]
 gi|332765628|gb|EGJ95841.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
 gi|333000638|gb|EGK20215.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-218]
 gi|333015889|gb|EGK35225.1| glycine betaine/L-proline transport system permease protein proW
           [Shigella flexneri K-304]
          Length = 354

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALITWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F QL         + +F         +G+   ++  ++           +    +    V
Sbjct: 97  FQQLLLGMPAPVAIIVFALITWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----V 152

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+
Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G 
Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A +  +++ + + G       GLG  +     +       +G + +    + L+
Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321

Query: 571 RF 572
           R 
Sbjct: 322 RL 323


>gi|16128352|ref|NP_414901.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107238|ref|AP_001018.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079956|ref|YP_001729276.1| taurine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238899660|ref|YP_002925456.1| taurine transporter subunit [Escherichia coli BW2952]
 gi|256024012|ref|ZP_05437877.1| taurine transporter subunit [Escherichia sp. 4_1_40B]
 gi|300947989|ref|ZP_07162133.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957922|ref|ZP_07170092.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301025816|ref|ZP_07189323.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301647281|ref|ZP_07247098.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307137011|ref|ZP_07496367.1| taurine transporter subunit [Escherichia coli H736]
 gi|331640882|ref|ZP_08342017.1| taurine transport system permease protein TauC [Escherichia coli
           H736]
 gi|34396000|sp|Q47539|TAUC_ECOLI RecName: Full=Taurine transport system permease protein tauC
 gi|1657562|gb|AAB18090.1| membrane component [Escherichia coli str. K-12 substr. MG1655]
 gi|1786564|gb|AAC73470.1| taurine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85674508|dbj|BAE76148.1| taurine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169887791|gb|ACB01498.1| taurine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238863626|gb|ACR65624.1| taurine transporter subunit [Escherichia coli BW2952]
 gi|260450443|gb|ACX40865.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|299879958|gb|EFI88169.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300315386|gb|EFJ65170.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300452453|gb|EFK16073.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|301074569|gb|EFK89375.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|315135051|dbj|BAJ42210.1| taurine transporter subunit [Escherichia coli DH1]
 gi|315616702|gb|EFU97319.1| taurine transport system permease protein tauC [Escherichia coli
           3431]
 gi|323943176|gb|EGB39332.1| inner membrane transport system [Escherichia coli E482]
 gi|331037680|gb|EGI09900.1| taurine transport system permease protein TauC [Escherichia coli
           H736]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+++ +  A +  IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 104/253 (41%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P+ +++ +     P      +L Q+ + +  R++ A+ 
Sbjct: 33  VLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALF 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++LF          S  +  +L PI+++ + +P L +L   V++F           E +
Sbjct: 93  AAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + ++ +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|332761727|gb|EGJ92006.1| taurine transport system permease protein tauC [Shigella flexneri
           2747-71]
 gi|332768548|gb|EGJ98730.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
          Length = 273

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 10  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 69

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 70  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 129

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 130 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 185

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 186 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 239

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 240 VLAGIAVIAIIAFLLELGLRALQRRLTPW 268



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 35  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 95  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 146

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 147 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 206

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 207 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 260

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 261 LQRRLTPWH 269


>gi|301025486|ref|ZP_07189033.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300396001|gb|EFJ79539.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAILLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 102/253 (40%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P+ ++  +     P      +L Q+ + +  R++ A++
Sbjct: 33  ILLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           S  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|302327398|gb|ADL26599.1| ABC transporter, permease protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 250

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++ ++V     A+++ I +GI  G  P + + ++P ++  A  P NV+ P  
Sbjct: 51  ELLRSAWSSLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYA 110

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ +  ++L+     + ++     W I  N  AGA+  P  ++  A+   I  + +   I
Sbjct: 111 IAILPTFYLS----STFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRI 166

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                 P   +G     G ++    V+E+          TGLG ++    +   +P +V 
Sbjct: 167 AFVASLPSIFSGLSVGMGLSFIMLTVAELFG------ENTGLGHFVQFYADYSDYPNMVA 220

Query: 558 GVLIMCCFVLALNRFL 573
           G+L     VLA+  F 
Sbjct: 221 GILWTGIVVLAIMEFF 236



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 14/228 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +   I+       +   P     +  +      L + A  + L+++ A   + +      
Sbjct: 19  IWTFISSGPEWSSQYLFPSPKAVLTALFNSREELLRSAWSSLLKLVPAYFAAAVVGISLG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            ++     +G +L PI      IP   ++ + +      Y        L++ F IF +  
Sbjct: 79  IVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY--------LSSTFIIFIAAF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  +      +IP      +    +  ++  W +    S+P +   + + M   +  +
Sbjct: 131 WPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPSIFSGLSVGMGLSFIML 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +E+           G+G ++       D   ++  +L    V+   
Sbjct: 191 TVAELFGENT------GLGHFVQFYADYSDYPNMVAGILWTGIVVLAI 232


>gi|150005778|ref|YP_001300522.1| glycine betaine/L-proline transport system permease [Bacteroides
           vulgatus ATCC 8482]
 gi|294776156|ref|ZP_06741645.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
 gi|149934202|gb|ABR40900.1| glycine betaine/L-proline transport system permease [Bacteroides
           vulgatus ATCC 8482]
 gi|294449979|gb|EFG18490.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
          Length = 274

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+     + I  + +    ++     I  I+ + L           +T   +LS+ +I+L
Sbjct: 41  LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        +A S+R   +L PILD+MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 IMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  +  Q  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    F V   +   +AW   G  V+ FT   +L +  +G       T+  V+   IIA
Sbjct: 40  ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I+ +P+GIW          + P   L+   PA V+    V       +       +   
Sbjct: 100 LIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E + SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|296118044|ref|ZP_06836626.1| sulfonate ABC transporter, permease protein SsuC [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968930|gb|EFG82173.1| sulfonate ABC transporter, permease protein SsuC [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 273

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV+   +I  +  I +G+ +G      + + P  Q L A P     PL +     
Sbjct: 81  ATSGQRVITGFLIGVVAGIGLGLLVGMSSLFDAALDPLLQALRALPHLGLVPLFIIWFGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       LL+  G  + +  N  +G         E A     +  +  R +I+PG  
Sbjct: 141 GEL----PKVLLIALGVLFPLYLNTASGFRQADPKLLETARVLGFSFSQRVRKVIVPGAA 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   A   AW   IV+E  +       + GLG  I  + +      V+ G++I  
Sbjct: 197 PALFVGLRQASASAWLTLIVAEQVN------ASQGLGFMINNARDFYRTDVVIFGLIIYA 250

Query: 564 CFVLALNRFLWH 575
              L  +  +  
Sbjct: 251 TLGLLTDALIRR 262



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 96/254 (37%), Gaps = 15/254 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
            F + RI   I   +  VL+  +++++ L   +    P  I+      L   +L    + 
Sbjct: 23  SFKAPRISGRIISPIIAVLLWQLLSVVGLLPERILPAPTAIITAGWEVLTDGTLAIALAT 82

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+++  +I ++       L   S      L P+L  ++++P LG +   +++F    
Sbjct: 83  SGQRVITGFLIGVVAGIGLGLLVGMSSLFDAALDPLLQALRALPHLGLVPLFIIWFGIG- 141

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL  +  I    ++ +  +           L E +R    S  Q+   + VP 
Sbjct: 142 -------ELPKVLLIALGVLFPLYLNTASGFRQADPKLLETARVLGFSFSQRVRKVIVPG 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L   +  + +  W  ++ +E +          G+G  I  A        +++ ++ 
Sbjct: 195 AAPALFVGLRQASASAWLTLIVAEQVNASQ------GLGFMINNARDFYRTDVVIFGLII 248

Query: 248 MLGVIFLYDQLLFR 261
              +  L D L+ R
Sbjct: 249 YATLGLLTDALIRR 262


>gi|261407407|ref|YP_003243648.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261283870|gb|ACX65841.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 258

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 10/227 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  +       I    +      +       +I    I+ +RV++     S++ IPVGI
Sbjct: 21  VWHLLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGI 80

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            IG    I    +PF   +   P   F  L +        +      +L+++ T + ++ 
Sbjct: 81  MIGKVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIGETSK----IMLILYATFFIVVL 136

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G  +   D    A S   + W+   ++++P   P+  TG   A G ++ A I +E+
Sbjct: 137 NTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAEM 196

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         G+G  I  S        + +G++ +       +R +
Sbjct: 197 IA------SNEGVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 14/228 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  L +G +    P          L   +L QY   ++ R+L       L       +  
Sbjct: 24  LLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGIMIG 83

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           K   + +   P L+ ++ IP + F+T  +V+F           E + I  I  +  + + 
Sbjct: 84  KVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG--------ETSKIMLILYATFFIVV 135

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + ++  D    +RS   S WQ   ++ +P ++P +   + ++M   +  ++ +E
Sbjct: 136 LNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAE 195

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MI   +      G+G  I  +        I   ++ +  + FL D+ +
Sbjct: 196 MIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237


>gi|288917422|ref|ZP_06411788.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288351125|gb|EFC85336.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 313

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 83/251 (33%), Gaps = 14/251 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDI-FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           G  R   P    +      +     I  W        +   W  +    +     ++   
Sbjct: 56  GARRRGVPRWVRRPVGPLCLLAAWQIAVWTGSASTELLASPWTVVTTFADLVGNGELPKA 115

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I    +++ R    +++   I I + +  G        I    Q++   P     PL + 
Sbjct: 116 I---LVSLRRAGTGLLLGGFIGITLALLAGLFRLGEDLIDAAVQMIRTVPFVGLIPLFII 172

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                        + L+ FG  + +  N  AG         E A +  +      R++IL
Sbjct: 173 WFGIGERPK----TALVAFGVAFPLYLNTYAGIRNVDATLVEAARTVGLGRAGLIRHVIL 228

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P  + G   + G AW A I +E  +         GLG  +  + E      +V+ +
Sbjct: 229 PGALPNVLVGLRFSLGIAWLALIFAEQIN------ANRGLGHLMNRAQEFQRTDIIVVCL 282

Query: 560 LIMCCFVLALN 570
           ++     LA++
Sbjct: 283 VVYALLGLAVD 293



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 90/259 (34%), Gaps = 19/259 (7%)

Query: 3   LYNILPPFISRRIFPNIF----DLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLD 57
           L  ++P    RR  P         L  +    I         E    P  +V      + 
Sbjct: 49  LTTVVPAGARRRGVPRWVRRPVGPLCLLAAWQIAVWTGSASTELLASPWTVVTTFADLVG 108

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              LP+    +  R  + +++        A LA   R    ++   + +++++P +G + 
Sbjct: 109 NGELPKAILVSLRRAGTGLLLGGFIGITLALLAGLFRLGEDLIDAAVQMIRTVPFVGLIP 168

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F      K           +     + +  + Y  + N+   L E +R+  L   
Sbjct: 169 LFIIWFGIGERPKTA--------LVAFGVAFPLYLNTYAGIRNVDATLVEAARTVGLGRA 220

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               ++ +P ++P ++  +  S+   W  ++ +E I          G+G  +  A + Q 
Sbjct: 221 GLIRHVILPGALPNVLVGLRFSLGIAWLALIFAEQINAN------RGLGHLMNRAQEFQR 274

Query: 238 LLAILYAMLTMLGVIFLYD 256
              I+  ++    +    D
Sbjct: 275 TDIIVVCLVVYALLGLAVD 293


>gi|221209826|ref|ZP_03582807.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD1]
 gi|221170514|gb|EEE02980.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD1]
          Length = 287

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 20/265 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  +RR     + +    L    + ++  G++   +P ++V       D         +
Sbjct: 21  PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E   I  I     + +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P LV  +   +S  W F+VA+E+I          G+G  ++   +      +
Sbjct: 193 RILLPAALPQLVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 246

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
             A+L +  +  L D  + R  + W
Sbjct: 247 FGAILLLALLGKLTDGAMRRIELHW 271



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 84/246 (34%), Gaps = 10/246 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           + + +            P    ++         L +  F V  G        +   I + 
Sbjct: 12  DALVRRPCAPPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDT 71

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   V      +  RV     I + + + VG  +G    I + ++P  Q L A P+
Sbjct: 72  LARMGAARVARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPS 131

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+++  +             L+  G  + +   V+AG         E+ + + +  
Sbjct: 132 LAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRP 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R I+LP   P  VTG  T    AW   + +E+ +       T GLG  +++  E G
Sbjct: 188 LALFRRILLPAALPQLVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETG 241

Query: 551 SFPEVV 556
               V 
Sbjct: 242 RPDLVF 247


>gi|289667090|ref|ZP_06488165.1| ABC transporter permease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 264

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 15/225 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +    L Q+ + ++ R    + I     F    L   SR    +L 
Sbjct: 39  LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 99  SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGVRSV 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R++ L G Q FW + +P ++P ++  +   +   W  ++ +E I        
Sbjct: 151 DPALIEMARNYGLRGPQLFWDVLLPGALPSILVGLRFGLGLMWLTLIVAETISASS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             GIG     A +      ++ A++    +  L D L  R +  W
Sbjct: 207 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 248



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  V + I   I   +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLDSALQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G  +      E+A ++ + G + +  ++LPG  
Sbjct: 123 ----DEGAKLFLVALGTFFPIYLNTYHGVRSVDPALIEMARNYGLRGPQLFWDVLLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G  W   IV+E  S       ++G+G     + E      VV+ +++  
Sbjct: 179 PSILVGLRFGLGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239


>gi|221196133|ref|ZP_03569180.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2M]
 gi|221202806|ref|ZP_03575825.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2]
 gi|221176740|gb|EEE09168.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2]
 gi|221182687|gb|EEE15087.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia multivorans CGD2M]
          Length = 287

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 104/265 (39%), Gaps = 20/265 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  + R     + +    L    + ++ +G++   +P ++V       D         +
Sbjct: 21  PPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E   I  I     + +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +
Sbjct: 193 RILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 246

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
             A+L +  +  L D  + R  + W
Sbjct: 247 FGAILLLALLGKLTDGAMRRIELHW 271



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 13/254 (5%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI- 364
            SP       L R         P + L+      ++                G+    + 
Sbjct: 4   LSPTVARDDALVRRPCAPPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVP 63

Query: 365 --GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
               I +         V      +  RV     I + + + VG  +G    I + ++P  
Sbjct: 64  APSEIFDTLARMGAARVARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTF 123

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L A P+  + P+++  +             L+  G  + +   V+AG         E+
Sbjct: 124 QALRAIPSLAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIEL 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            + + +     +R I+LP   P  VTG  T    AW   + +E+ +       T GLG  
Sbjct: 180 GALYRLRPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFL 233

Query: 543 IAESTEKGSFPEVV 556
           +++  E G    V 
Sbjct: 234 LSDGRETGRPDLVF 247


>gi|148976132|ref|ZP_01812875.1| putative permease [Vibrionales bacterium SWAT-3]
 gi|145964527|gb|EDK29781.1| putative permease [Vibrionales bacterium SWAT-3]
          Length = 299

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+G+   L++    +        +  + +    + +   RT   +    ++S+     
Sbjct: 64  LIVLGVCTGLVYAASRSWKLALGCVLSLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LDIMQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ W + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L     ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  L +   C     A   +W+     V          +      T+  + V  +++  
Sbjct: 60  STPWLIVLGVCTGLVYAASRSWKLALGCVLSLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +       S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   ++    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280


>gi|253686433|ref|YP_003015623.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251753011|gb|ACT11087.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 264

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 106/269 (39%), Gaps = 17/269 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
             P  +++R+ P +  +   V     +       +    P  ++      +    L Q+ 
Sbjct: 3   RTPSSLAQRLAPFLLPVTLLVAWQVAVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R L    I          +   SR    +L   + +++++P L  +   +++F  
Sbjct: 63  AISGWRALIGFAIGGTIGLTLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +
Sbjct: 123 D--------EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVL 174

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  ++   W  ++ +E I          GIG     A +      ++ A+
Sbjct: 175 PGALPSIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAI 228

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           +    +  L D   Q L R  + W+  ++
Sbjct: 229 ILYALLGKLADISAQGLERIWLRWNPAYQ 257



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 82/247 (33%), Gaps = 17/247 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383
                  QR++  L      V   VA+   W S   +    +     + +          
Sbjct: 3   RTPSSLAQRLAPFLLPVTLLVAWQVAVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHL 62

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G   G        +    Q++   P     PLV+     
Sbjct: 63  AISGWRALIGFAIGGTIGLTLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + +  N   G         E+A S+ ++G   +  ++LPG  
Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239


>gi|333008553|gb|EGK28021.1| taurine transport system permease protein tauC [Shigella flexneri
           VA-6]
          Length = 279

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V  ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------VTRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 104/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVQALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I V        G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIAV------TRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|260892265|ref|YP_003238362.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
 gi|260864406|gb|ACX51512.1| binding-protein-dependent transport systems inner membrane
           component [Ammonifex degensii KC4]
          Length = 245

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++ +R++  + +A+   +P+G+++G  P     + PF  L+   P  V  PL++     
Sbjct: 53  LVSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVPLIMVVFGL 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L ++L++ F     IL  V  GA        +  +S  + G  ++R+++ P + 
Sbjct: 113 GDAAKILLITLVLFF----QILLPVRDGARHLSPYLVDAVTSLGVRGLAFYRHVVFPAVL 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A      +E  +         GLG Y+ ++  + ++P++  GVL M 
Sbjct: 169 PEVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYAYPDLYAGVLAMS 222

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                L   L      +  R L
Sbjct: 223 LLGFILYSLL-----EWLERRL 239



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 14/202 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L      +T R+L+ M ++            +  R   +L P   ++  +P +  + 
Sbjct: 45  PGPLGFNWLVSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVP 104

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +V F           + A I  I     + +   +     ++   L +   S  + G 
Sbjct: 105 LIMVVFGLG--------DAAKILLITLVLFFQILLPVRDGARHLSPYLVDAVTSLGVRGL 156

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             + ++  P  +P ++  + ++       +  +E I          G+G Y+  A     
Sbjct: 157 AFYRHVVFPAVLPEVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYA 210

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +   +L M  + F+   LL
Sbjct: 211 YPDLYAGVLAMSLLGFILYSLL 232


>gi|114319894|ref|YP_741577.1| binding-protein-dependent transport systems inner membrane
           component [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226288|gb|ABI56087.1| binding-protein-dependent transport systems inner membrane
           component [Alkalilimnicola ehrlichii MLHE-1]
          Length = 282

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +L A  +++            S R   V+ P+LD MQ++P   +L   
Sbjct: 89  QLWVATMETLTLVLFATAVAVTIALPIGIWGGLSGRAHRVMTPVLDFMQTMPAFVYLIPA 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V +F            +AA+FA     +          +  +P +L E + +F  +  QK
Sbjct: 149 VPFFGLG--------PVAAMFATVIFSMPPAIRLTTLGIRQVPAELVEAADAFGATRRQK 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  ++      VV + MI  G       G+GS +  AI+     
Sbjct: 201 LFKVQLPLAVPTIMAGINQTIMLALSMVVIAAMIGAG-------GLGSEVWRAIQRLQSG 253

Query: 240 AILYAMLTMLGVIFLYDQL 258
               A + ++ +  + D++
Sbjct: 254 NGFEAGIAIVILAMILDRV 272



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 87/279 (31%), Gaps = 13/279 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F+  I  + W          K    T  + RF      L + +       + I  F  +
Sbjct: 6   PFIGKIPLADWIDSGLDWLTDKFALVTRAISRFMGDGVELVVGALTYPPPWVVILGFMAL 65

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                G        +     +   L+V  +  +T+  V+    +A  I +P+GIW G   
Sbjct: 66  AWWLAGRRVAIGTGLGLALLWNLQLWVATMETLTL--VLFATAVAVTIALPIGIWGGLSG 123

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                + P    +   PA V+    V       +       +     +    +     G 
Sbjct: 124 RAHRVMTPVLDFMQTMPAFVYLIPAVPFFGLGPVAAMFATVIF----SMPPAIRLTTLGI 179

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E A +F  T  +    + LP   P  + G       A +  +++ +   G  
Sbjct: 180 RQVPAELVEAADAFGATRRQKLFKVQLPLAVPTIMAGINQTIMLALSMVVIAAMIGAG-- 237

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                GLG+ +  + ++          + +    + L+R
Sbjct: 238 -----GLGSEVWRAIQRLQSGNGFEAGIAIVILAMILDR 271


>gi|293413621|ref|ZP_06656270.1| taurine transporter subunit [Escherichia coli B185]
 gi|291433679|gb|EFF06652.1| taurine transporter subunit [Escherichia coli B185]
          Length = 275

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|91224154|ref|ZP_01259417.1| putative permease [Vibrio alginolyticus 12G01]
 gi|91191065|gb|EAS77331.1| putative permease [Vibrio alginolyticus 12G01]
          Length = 299

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++G+   L++    +           I +    + +   RT   +    ++++     
Sbjct: 64  FIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMARSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ + + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I   C     A   +W+                +      T+  + V  ++A  
Sbjct: 60  STPWFIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     I S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|62183746|gb|AAX73264.1| transmembrane protein [Methanohalophilus portucalensis FDF-1]
          Length = 276

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  VL+  I  ++     +  +   +  IV +++D   L +Y+  T   ++S+  ++L+
Sbjct: 51  LLFVVLIAAIAYVVGRKDWKLALGTALGFIVILSMD---LWEYSMETIALVISSAALALI 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LAAKS  L  +L PILD+MQ++P   +L   V++F     G V G     +F+
Sbjct: 108 IGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIFFGL---GNVPGMIATVVFS 164

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +            +  +P++L EV+ +F  + WQK   + +P ++  ++  +   + 
Sbjct: 165 MPPA-----IRLTTLGITQVPKELVEVADAFGSTSWQKLIKVEIPVALKTIMAGVNQCIM 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G  + + I+  D+     A L ++ +  + D+L
Sbjct: 220 LALSMVVIASMI-------GARGLGYQVLIGIQRVDIGVGFEAGLGIVIIAIVLDRL 269



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L +     +  V     W+        F     + +      T+  V+    +A I
Sbjct: 48  MPPLLFVVLIAAIAYVVGRKDWKLALGTALGFIVILSMDLWEYSMETIALVISSAALALI 107

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI       +   ++P   L+   P+ V+    V      ++   +   +     
Sbjct: 108 IGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIFFGLGNVPGMIATVVF---- 163

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G +  P +  EVA +F  T W+    + +P      + G       A +
Sbjct: 164 SMPPAIRLTTLGITQVPKELVEVADAFGSTSWQKLIKVEIPVALKTIMAGVNQCIMLALS 223

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +    ++          L +    + L+R 
Sbjct: 224 MVVIASMIG-------ARGLGYQVLIGIQRVDIGVGFEAGLGIVIIAIVLDRL 269


>gi|298292916|ref|YP_003694855.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296929427|gb|ADH90236.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 201

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 68/174 (39%), Gaps = 10/174 (5%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+G+ +G  P I   + P  +     P   + PL++       L+      LL+   
Sbjct: 24  VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIGELSK----VLLIFLS 79

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +     AG  +   +    A SF  + W+   ++ILP   P  +T      G  W 
Sbjct: 80  VFAPVALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWT 139

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + +E+ +       T GLG  +  +++      V++G++++       +  +
Sbjct: 140 TLVAAEMIA------ATEGLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLM 187



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 17/191 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P ++  + IP L +L   +++F           EL+ +  
Sbjct: 24  VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIG--------ELSKVLL 75

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF S    +       + +   +    + SF  S W+   ++ +P S+P ++  M + + 
Sbjct: 76  IFLSVFAPVALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIG 135

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+EMI   +      G+G  +  A +      ++  ++ +  +  L+D   +L
Sbjct: 136 FGWTTLVAAEMIAATE------GLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLMRL 189

Query: 259 LFRPMIVWSNK 269
           + R ++ W  K
Sbjct: 190 IERRIVPWKGK 200


>gi|241205709|ref|YP_002976805.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859599|gb|ACS57266.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 280

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 17/254 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +     I       +    P  +   + + L    L  +   TT+R+     I  + 
Sbjct: 40  LGLLFWEIAIAAGWFSGRLMPPPSRVAATLWVLLKSGELLNHIGITTVRVFFGFAIGAVT 99

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   +         ++ P L  ++SIP + ++   +++F      KV    +   F +
Sbjct: 100 ATIAGAITGYFGLARRLIDPSLQALRSIPSIAWVPLFILWFGIFETSKVALIAVGVFFPV 159

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +          +  ++ ++ R + EV R FRLSG+     + +P   P  V  +   +  
Sbjct: 160 Y--------LGISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVTALRSGLGL 211

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
           GW FVVA+E +   +      G+G  +    +      I+ A++    V  L D LL   
Sbjct: 212 GWMFVVAAEFMGASE------GLGYLLVDGQQMGKPDQIMAAIIAFAVVGKLTDSLLLAA 265

Query: 261 -RPMIVWSNKFRLE 273
             P + W + +R E
Sbjct: 266 TTPFLTWQDSYRRE 279



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 17/245 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMF 388
           SN+    +L      +   +AI   W S   +         L+V+           IT  
Sbjct: 28  SNKVAVAVLLPALGLLFWEIAIAAGWFSGRLMPPPSRVAATLWVLLKSGELLNHIGITTV 87

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV     I ++     G   G+       I P  Q L + P+  + PL +     +  + 
Sbjct: 88  RVFFGFAIGAVTATIAGAITGYFGLARRLIDPSLQALRSIPSIAWVPLFILWFGIFETSK 147

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 L+  G  + +   +     +      EV   F ++G+   R ++LP +FP YVT
Sbjct: 148 ----VALIAVGVFFPVYLGISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVT 203

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
              +  G  W   + +E          + GLG  + +  + G   +++  ++        
Sbjct: 204 ALRSGLGLGWMFVVAAEFMG------ASEGLGYLLVDGQQMGKPDQIMAAIIAFAVVGKL 257

Query: 569 LNRFL 573
            +  L
Sbjct: 258 TDSLL 262


>gi|218693829|ref|YP_002401496.1| taurine transporter subunit [Escherichia coli 55989]
 gi|218350561|emb|CAU96249.1| taurine transporter subunit ; membrane component of ABC superfamily
           [Escherichia coli 55989]
          Length = 275

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVASLQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVASLQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|167923398|ref|ZP_02510489.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
          Length = 283

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|212693216|ref|ZP_03301344.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855]
 gi|237709959|ref|ZP_04540440.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|237725376|ref|ZP_04555857.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. D4]
 gi|265753610|ref|ZP_06088965.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_33FAA]
 gi|212664321|gb|EEB24893.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855]
 gi|229436063|gb|EEO46140.1| glycine betaine/L-proline transport system permease [Bacteroides
           dorei 5_1_36/D4]
 gi|229456052|gb|EEO61773.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 9_1_42FAA]
 gi|263235324|gb|EEZ20848.1| glycine betaine/L-proline transport system permease [Bacteroides
           sp. 3_1_33FAA]
          Length = 274

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+     + I  + +    ++     I  I+ + L           +T   +LS+ +I+L
Sbjct: 41  LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        +A S+R   +L PILD+MQ++P   +L   V++F     G V GA    IF
Sbjct: 101 IMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +P+++ E SRSF  +  Q  + + +P ++P ++  +  ++
Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVIEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    F V   +   +AW   G  V+ FT   +L +  +G       T+  V+   IIA
Sbjct: 40  ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I+ +P+GIW          + P   L+   PA V+    V       +       +   
Sbjct: 100 LIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E + SF  T  +    + LP   P  +TG       +
Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVIEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263


>gi|150390569|ref|YP_001320618.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
 gi|149950431|gb|ABR48959.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
          Length = 287

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +L++ VIS++       L AK++ +  +++PI+D+MQ++P   +L   
Sbjct: 93  GLWVPTMSTLSMVLTSTVISIMLGIPIGILIAKNQIMNRIIMPIMDLMQTMPAFVYLIPA 152

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V +F     GKV G     IF+I               +  +P +L E + +F  +G QK
Sbjct: 153 VSFFRM---GKVPGIFATVIFSIA-----PCIRLTNLGIRQVPEELIEAADAFGSTGAQK 204

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P ++  ++  +  ++      VV S MI  G       G+G  +   I+   + 
Sbjct: 205 LMKVQFPLALSTIMAGVNQTIMLSLSMVVISAMIGAG-------GLGREVWHGIQRLQVG 257

Query: 240 AILYAMLTMLGVIFLYDQL 258
           +   A + ++ +  + D++
Sbjct: 258 SAFEAGIAVVILAMILDRI 276



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 16/217 (7%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           W+     V  F++  +L V  LG       T+  V+   +I+ ++ IP+GI I     ++
Sbjct: 71  WRVASKGVGIFSFLGLLLVYNLGLWVPTMSTLSMVLTSTVISIMLGIPIGILIAKNQIMN 130

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I P   L+   PA V+    +  VS++ +     +   +IF     I      G    
Sbjct: 131 RIIMPIMDLMQTMPAFVYL---IPAVSFFRMGKVPGIFATVIFSIAPCIRL-TNLGIRQV 186

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P +  E A +F  TG +    +  P      + G       + +  ++S +   G     
Sbjct: 187 PEELIEAADAFGSTGAQKLMKVQFPLALSTIMAGVNQTIMLSLSMVVISAMIGAG----- 241

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             GLG  +    ++          + +    + L+R 
Sbjct: 242 --GLGREVWHGIQRLQVGSAFEAGIAVVILAMILDRI 276


>gi|91212039|ref|YP_542025.1| glycine betaine transporter membrane protein [Escherichia coli
           UTI89]
 gi|110642804|ref|YP_670534.1| glycine betaine transporter membrane protein [Escherichia coli 536]
 gi|117624914|ref|YP_853857.1| glycine betaine transporter membrane protein [Escherichia coli APEC
           O1]
 gi|191171377|ref|ZP_03032926.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli F11]
 gi|218559670|ref|YP_002392583.1| glycine betaine transporter membrane protein [Escherichia coli S88]
 gi|237706700|ref|ZP_04537181.1| high-affinity transport system for glycine betaine and proline
           [Escherichia sp. 3_2_53FAA]
 gi|300990598|ref|ZP_07179248.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|91073613|gb|ABE08494.1| high-affinity transport system for glycine betaine and proline
           [Escherichia coli UTI89]
 gi|110344396|gb|ABG70633.1| glycine betaine/L-proline transport system permease protein ProW
           [Escherichia coli 536]
 gi|115514038|gb|ABJ02113.1| glycine betaine/L-proline transport system permease protein P
           [Escherichia coli APEC O1]
 gi|190908311|gb|EDV67901.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli F11]
 gi|218366439|emb|CAR04191.1| glycine betaine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|226899740|gb|EEH85999.1| high-affinity transport system for glycine betaine and proline
           [Escherichia sp. 3_2_53FAA]
 gi|294493392|gb|ADE92148.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia coli IHE3034]
 gi|300305715|gb|EFJ60235.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|307625750|gb|ADN70054.1| glycine betaine transporter membrane protein [Escherichia coli
           UM146]
 gi|320194818|gb|EFW69447.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Escherichia coli WV_060327]
 gi|323951100|gb|EGB46976.1| inner membrane transport system [Escherichia coli H252]
 gi|323957109|gb|EGB52834.1| inner membrane transport system [Escherichia coli H263]
 gi|324014409|gb|EGB83628.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 354

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|254193642|ref|ZP_04900074.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|169650393|gb|EDS83086.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
          Length = 285

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 93  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 209 PDILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 263 AIALALEIGLRALQRRLTPW 282



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 82  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  M +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 194 TRVQLLRHVVLPSALPDILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|323965317|gb|EGB60775.1| inner membrane transport system [Escherichia coli M863]
 gi|327254683|gb|EGE66299.1| taurine transport system permease protein tauC [Escherichia coli
           STEC_7v]
          Length = 275

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVMAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ +I A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALIAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVMAKLLTIAGPQGFMDATLWQHLAASLTRIVLALIAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|260913934|ref|ZP_05920408.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Pasteurella dagmatis ATCC 43325]
 gi|260632021|gb|EEX50198.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Pasteurella dagmatis ATCC 43325]
          Length = 613

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 15/180 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ++ + +   L       L A + RL  +L PILD++Q++P   +L   
Sbjct: 420 GLWFPLMQTLALLIVSALFITLLGIPIGILMASNARLHRILQPILDVIQTMPSFVYLIPV 479

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F     GKV       ++AI       +       +  +   + E ++SF  + WQ 
Sbjct: 480 LMLFG---IGKVPALFATVVYAIA-----PLIRLTALGIRQVNPQIIEAAQSFGSTRWQL 531

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ +P +   ++  +  ++      VV + MI          G+G Y+  AI+  ++ 
Sbjct: 532 LVWVLLPQAKASIMAGINQAVMMSLGMVVLASMI-------GAKGLGEYVLQAIQTLNIG 584



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 103/302 (34%), Gaps = 31/302 (10%)

Query: 259 LFRPMIVWSNKFRLERTTGIYPAD------SWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
           +++  +    K +L++               W +      + ++ +      F      +
Sbjct: 309 IWQKWVSQQAKEKLQQFLQQDEKQENSIFAPWSIADSLNRSLVKTVQNYGVEFRQISQIS 368

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +  L   +  +    P   + +       +    +WF ++C   I +             
Sbjct: 369 LDYLLLPIESVLQATPAWLILILIALISWHATKKWWFSLLCLGGIYLI------------ 416

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
               L + +    T+  ++V  +  +++ IP+GI +     +   +QP   ++   P+ V
Sbjct: 417 --GALGLWFPLMQTLALLIVSALFITLLGIPIGILMASNARLHRILQPILDVIQTMPSFV 474

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +   V+       + P L+ +++        ++     G         E A SF  T W+
Sbjct: 475 YLIPVLMLFGIGKV-PALFATVVYAIA---PLIRLTALGIRQVNPQIIEAAQSFGSTRWQ 530

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              +++LP      + G   A   +    +++ +           GLG Y+ ++ +  + 
Sbjct: 531 LLVWVLLPQAKASIMAGINQAVMMSLGMVVLASMIG-------AKGLGEYVLQAIQTLNI 583

Query: 553 PE 554
            +
Sbjct: 584 GQ 585


>gi|296159378|ref|ZP_06842203.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890362|gb|EFG70155.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 288

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 12/259 (4%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVI--RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            ++    +P     ++L  +      R   P    +          L +    V   V  
Sbjct: 2   AATEETLAPARRASQRLAASNPAQNQRIRDPLRPWRYAGLALPVLFLAVIEVLVRASVLP 61

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                +   I         L +      ++ RV     + S + + +G  +G      + 
Sbjct: 62  AHLVPAPSAIAQTLWDLGGLRLARHVGASVARVCAGFALGSALALLIGAAMGLSRRADAL 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  Q L A P+  + P+++  +             L+  G  + +   V+AG      
Sbjct: 122 LDPAFQALRAIPSLAWVPMLLLWMGI----DEAPKITLIAIGAFFPVQLGVVAGIHGVDR 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E      +T    +  I+LP   P   TG  T    AW   + +E+ +       T 
Sbjct: 178 KLIEFGEVNRLTQRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAELIA------ATR 231

Query: 538 GLGAYIAESTEKGSFPEVV 556
           GLG  +++  E G    V 
Sbjct: 232 GLGYLLSDGRETGRPDVVF 250



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 14/220 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F+ VI ++                +      L    L ++   +  R+ +   +    
Sbjct: 45  VLFLAVIEVLVRASVLPAHLVPAPSAIAQTLWDLGGLRLARHVGASVARVCAGFALGSAL 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SRR   +L P    +++IP L ++   +++            E   I  I
Sbjct: 105 ALLIGAAMGLSRRADALLDPAFQALRAIPSLAWVPMLLLWMGID--------EAPKITLI 156

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +   +   +  + R L E     RL+    F  + +P SMP +   +   +S 
Sbjct: 157 AIGAFFPVQLGVVAGIHGVDRKLIEFGEVNRLTQRALFTRILLPASMPQIFTGLRTGLSL 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            W F+VA+E+I          G+G  ++   +      + 
Sbjct: 217 AWMFMVAAELIA------ATRGLGYLLSDGRETGRPDVVF 250


>gi|327393356|dbj|BAK10778.1| ABC-type sulfonate transport system, permease component SsuC
           [Pantoea ananatis AJ13355]
          Length = 279

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV           L Q+ + ++ R L    I      V   +   SR    +L 
Sbjct: 55  LPAPEKIVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLD 114

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A IF +    ++ +  + Y  + N+
Sbjct: 115 TSLQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 167 DRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETISANA---- 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277
             GIG     A +      ++ A++    +  L D    LL R  + W   ++ +  T 
Sbjct: 223 --GIGYLAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEKTA 279



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+     
Sbjct: 79  AISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLDTSLQMLRNVPHLALIPLVILWFGI 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  
Sbjct: 139 ----DESAKIFLVALGTLFPIYLNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGAL 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S         G+G     + E      V++ +++  
Sbjct: 195 PSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVMVAIILYA 248

Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583
                     L L R    WHP Y    +
Sbjct: 249 LLGKLADVSALLLERVWLRWHPAYQRQEK 277


>gi|20094040|ref|NP_613887.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Methanopyrus kandleri AV19]
 gi|19887017|gb|AAM01817.1| Homolog of ABC-type nitrate/sulfonate/taurine/bicarbonate transport
           systems, permease component [Methanopyrus kandleri AV19]
          Length = 251

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 81/196 (41%), Gaps = 10/196 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     +++RV V   IA++  + +G+ +G      + +    +++   P   + P
Sbjct: 53  PGEILKHALTSLYRVAVGYSIAAVAGVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIP 112

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +        +       ++  G+ + IL N I+G  +    + E A +         R
Sbjct: 113 LAIVWFGIGDPS----AFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIR 168

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++++PG  P   TG     G  W   + +E+ +        +GLG  I E+    +  +V
Sbjct: 169 HVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIA------AKSGLGYMIIEAQRILATDQV 222

Query: 556 VLGVLIMCCFVLALNR 571
           + G++ +    L ++R
Sbjct: 223 IAGMITIGLLGLVMDR 238



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 97/247 (39%), Gaps = 18/247 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A + +   ++ L         P   V  V + +    + ++A  +  R+     I+ + 
Sbjct: 19  VAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEM-PGEILKHALTSLYRVAVGYSIAAVA 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L    R     +  +++I++ IP + ++   +V+F    P        +A F I
Sbjct: 78  GVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGIGDP--------SAFFII 129

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +  +    + ++ R   E + +          ++ VP ++P +   + + +  
Sbjct: 130 FVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIRHVLVPGALPNIFTGLRVGLGV 189

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
           GW  VVA+EMI          G+G  I  A +      ++  M+T+  +  + D   + L
Sbjct: 190 GWMCVVAAEMIAAKS------GLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGFRYL 243

Query: 260 FRPMIVW 266
            R  +VW
Sbjct: 244 ERRALVW 250


>gi|33594562|ref|NP_882206.1| putative transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|33564638|emb|CAE43960.1| putative transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|332383973|gb|AEE68820.1| putative transport system permease protein [Bordetella pertussis
           CS]
          Length = 265

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++F  +V   I  +  +P G++ G+   + + + P    +   P   F P+ V     
Sbjct: 73  GASLFCALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGL 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       +L++F    Y   +  AGA + P  +   A S  +T  + +  ++ P   
Sbjct: 133 GEMGK----VVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSI 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG   A   +W   + +E+           GLG  I+++ +    P V +G+ ++ 
Sbjct: 189 PHIFTGLKVAMALSWAVVVAAELVGAQK------GLGFMISDAAQLFQIPVVFIGIALIG 242

Query: 564 CFVLALNRFL 573
              L LN  L
Sbjct: 243 LIGLVLNVML 252



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 19/247 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQYASRTTLRM 72
           ++  ++  + +  ++  L             +    +TL         L  +   +    
Sbjct: 20  SVASVVGLLAIWTLVTNLGLVGPGYLPSPQAMFAQLVTLVEQGYGGKPLWDHVGASLFCA 79

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I +L    +   +   + +G ++ PI+  ++ IP + F+   V+YF         
Sbjct: 80  LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLG------ 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E+  +  I  +       S      ++P      + S  ++  Q FW +  P S+P +
Sbjct: 134 --EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSIPHI 191

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++M+  W  VVA+E++          G+G  I+ A +   +  +   +  +  + 
Sbjct: 192 FTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGLIG 245

Query: 253 FLYDQLL 259
            + + +L
Sbjct: 246 LVLNVML 252


>gi|238796281|ref|ZP_04639791.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
 gi|238719974|gb|EEQ11780.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++V +  A  I IPVGI +G    + + + P  ++    P   + PL+V      
Sbjct: 58  ASLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIG 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+       +    + G  +        A +   T W+  R+++LP   P
Sbjct: 118 ETSK----ILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G  W+  + +E+ +       T GLG  +  ++E  +   V+ G++++  
Sbjct: 174 AILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIAL 227

Query: 565 FVLALN 570
               L 
Sbjct: 228 VAAGLE 233



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 96/235 (40%), Gaps = 19/235 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           L   ++        L        P+ +++ +     P      +L Q+ S +  R+L A+
Sbjct: 8   LAVLIIWWAATVQELINPLFLPSPQQVLNQLMVIASPQGFMNATLWQHLSASLGRILVAL 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             ++            + RL  VL P+++I + IP L +L   V++F           E 
Sbjct: 68  FAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIG--------ET 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +T +    + +I +     +++   + WQ   ++ +P ++P ++  +
Sbjct: 120 SKILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALPAILTGI 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + +  GW  +VA+E+I          G+G  +  A +      ++  ++ +  V
Sbjct: 180 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIALV 228


>gi|296156261|ref|ZP_06839100.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295893767|gb|EFG73546.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 278

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASI 399
           ++ I+W  V    A G             T   ++    L      ++ R+ + ++ A +
Sbjct: 42  IVAIWWLAVAVFAAPGTLAAQFSPARAFETLPALITDDRLAVHIVTSLRRIAIGLLWALL 101

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+G  IG    + + + P  Q L       + P+ V  +          +  L+ F 
Sbjct: 102 VGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVGDR----AVYFLLAFA 157

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W ++ +  AG +     + ++  S   T      ++ +PGI  + +TG   A G  W 
Sbjct: 158 AVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWHVYVPGIAAHVLTGVRLAIGILWI 217

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +E+         ++GLG  I ++ ++ ++ E+   +L++      L+
Sbjct: 218 VLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGALGFLLD 262



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + +      G       P    + +P  +    L  +   +  R+   ++ +LL      
Sbjct: 48  LAVAVFAAPGTLAAQFSPARAFETLPALITDDRLAVHIVTSLRRIAIGLLWALLVGVPLG 107

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  + + L   L P L  ++ I  L ++   V+             + A  F +  + V
Sbjct: 108 FLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVG--------DRAVYFLLAFAAV 159

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  S    + +I +   ++  S   +  +  W++ VP     ++  + +++   W  +
Sbjct: 160 WPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWHVYVPGIAAHVLTGVRLAIGILWIVL 219

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           V +EM+ V        G+G  I           +   +L +  + FL D 
Sbjct: 220 VPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGALGFLLDF 263


>gi|262203356|ref|YP_003274564.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262086703|gb|ACY22671.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 291

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 105/269 (39%), Gaps = 18/269 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           + P   + R       L+  ++V  +      G   T  P ++V      +    + Q+ 
Sbjct: 36  LRPGARTARAVRQSVGLVLVIVVWQLGARGWLGPT-TPAPTEVVTAGWDLVRSGEIWQHL 94

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +T R+   + I +    V    A   R    ++   + +++ +P +  +   +++F  
Sbjct: 95  AASTRRVGIGLAIGITIGVVLGAAAGTIRIAEDLVNAPIQVLRMMPAVALVPVFIIWFGI 154

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E   I  I  + ++ M  +++  + N+ + L E +RS  L+  +   ++ +
Sbjct: 155 D--------ETFKIALIIVAPIFPMYVNVFAGIRNVDQKLIEAARSLDLTRIEMLRFIIL 206

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P  +  +  ++  GW  +V +EM           G+G  +  A +      I   +
Sbjct: 207 PGALPQTLVGLRQALGIGWLVLVVAEM------QTTTVGLGFIMNDAKEYLRTDQIFLVL 260

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           +    +  + D   +LL R  + W N F 
Sbjct: 261 VIYAILGLITDLAVRLLERHFLSWRNGFE 289



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 79/247 (31%), Gaps = 10/247 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R        +         ++ + W     G            +   +       +    
Sbjct: 35  RLRPGARTARAVRQSVGLVLVIVVWQLGARGWLGPTTPAPTEVVTAGWDLVRSGEIWQHL 94

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV + + I   I + +G   G        +    Q+L   PA    P+ +     
Sbjct: 95  AASTRRVGIGLAIGITIGVVLGAAAGTIRIAEDLVNAPIQVLRMMPAVALVPVFIIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                  +   L+I    + +  NV AG         E A S  +T     R+IILPG  
Sbjct: 155 ----DETFKIALIIVAPIFPMYVNVFAGIRNVDQKLIEAARSLDLTRIEMLRFIILPGAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   +V+E+         T GLG  + ++ E     ++ L ++I  
Sbjct: 211 PQTLVGLRQALGIGWLVLVVAEM------QTTTVGLGFIMNDAKEYLRTDQIFLVLVIYA 264

Query: 564 CFVLALN 570
              L  +
Sbjct: 265 ILGLITD 271


>gi|182416935|ref|ZP_02948319.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237667333|ref|ZP_04527317.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182379233|gb|EDT76734.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237655681|gb|EEP53237.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 262

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 85/197 (43%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           + ++     +M R+V+  I+A+I  IP+G+  G+   I +  +P  +     P   ++ L
Sbjct: 62  ISLLQHLYASMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTL 121

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  +       N     L+   +   I  + ++      +D+   A +      + +RY
Sbjct: 122 LVLWMGI----DNKSKITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQIFRY 177

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P    G  TA G A+   + +E+ +        +G+G  + ++++      + 
Sbjct: 178 VIFPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSDIIF 231

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+ IM    + L++ +
Sbjct: 232 VGIAIMGITGILLDKII 248



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL Q+   +  R++ A +++ +        +  + ++  V  PI++  + +P L + T  
Sbjct: 63  SLLQHLYASMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTLL 122

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++       K        I  +F +    +  S   S+  I  D    + +   +  Q 
Sbjct: 123 VLWMGIDNKSK--------ITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQI 174

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F Y+  P  +P +   +  ++   +  +VA+EM+        + GIG  +  A K     
Sbjct: 175 FRYVIFPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSD 228

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            I   +  M     L D   + +   ++ W  K
Sbjct: 229 IIFVGIAIMGITGILLDKIIRFIESKIVPWKGK 261


>gi|116252514|ref|YP_768352.1| aliphatic sulfonates transport permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257162|emb|CAK08257.1| putative aliphatic sulfonates transport permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 253

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A V+   + +            P D+      T+    LP     +  R  + +++   
Sbjct: 14  VAIVVFWQLASSAGWISSRIMPSPADVGLAFWSTMVSGQLPNDVLVSAGRAFAGLLVGGS 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+       SR    +    L ++++IP L  +   +++F           E + +F 
Sbjct: 74  IGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFGIG--------EESKLFL 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                ++ +  + Y  +  + RDL E+ + + +  W  F  +  P ++P +   +  ++ 
Sbjct: 126 TSLGVLFPVYLNTYHGVRIVDRDLIEMGKVYGMGNWTLFRKVIFPGALPSIFVGLRYALG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ SE I          GIG     A +      ++ A++    +  L D   ++
Sbjct: 186 IMWLTLIVSESIAASS------GIGHMANNAREFMMTDVVVLALVIYAVLGKLADVIARV 239

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W+  ++
Sbjct: 240 LERRLLAWNPVYQ 252



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 81/256 (31%), Gaps = 26/256 (10%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----------CITM 387
           ++++  L      V   +A    W S   +    +  DV    W             ++ 
Sbjct: 5   EKLTPYLVPVAIVVFWQLASSAGWISSRIM---PSPADVGLAFWSTMVSGQLPNDVLVSA 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R    +++   I   +GI  G             Q+L   P     PLV+        +
Sbjct: 62  GRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFGIGEES 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L   G  + +  N   G      D  E+   + +  W  +R +I PG  P   
Sbjct: 122 K----LFLTSLGVLFPVYLNTYHGVRIVDRDLIEMGKVYGMGNWTLFRKVIFPGALPSIF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   A G  W   IVSE  +       ++G+G     + E      VVL ++I      
Sbjct: 178 VGLRYALGIMWLTLIVSESIA------ASSGIGHMANNAREFMMTDVVVLALVIYAVLGK 231

Query: 568 ALN---RFLWHPLYLY 580
             +   R L   L  +
Sbjct: 232 LADVIARVLERRLLAW 247


>gi|111023807|ref|YP_706779.1| ABC transporter, permease protein [Rhodococcus jostii RHA1]
 gi|110823337|gb|ABG98621.1| ABC transporter, permease protein [Rhodococcus jostii RHA1]
          Length = 286

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 14/262 (5%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
            +    +++ S         +     V          ++  +V+ F  Q    + +L   
Sbjct: 31  PWRSRLVRITSVIAAIVAWQVLTANDVRVWLRFDTLPTVTDVVSAFGTQLQSDLFYLDLG 90

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++    +A+++ +  GI +G     +  + P  +L    PA    P+ +      
Sbjct: 91  QSLIRILSGFGLATVVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLFP-- 148

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +  +      + I+ +      A P  +++   +     W     ++LPGI P
Sbjct: 149 --SDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLSRVVLPGILP 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G     G AW   I +E+ S         G+G    ++     +P V +G++ +  
Sbjct: 207 GVFGGLSVGIGVAWICVISAEMISGR------LGVGYRTWQAYTIVDYPGVFVGMITIGI 260

Query: 565 FVLALN---RFLWHPLYLYGTR 583
              A +     L   +  +  R
Sbjct: 261 LGFATSGAVELLGRRVTRWLPR 282



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 17/208 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             ++ +R+LS   ++ +          +S     VL P+ ++ + IP +  +   ++ F 
Sbjct: 89  LGQSLIRILSGFGLATVVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLF- 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +F  F +  + +  S   ++  +P   E+  R+     W     + 
Sbjct: 148 -------PSDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLSRVV 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +PG+   + + +   W  V+++EMI          G+G     A    D   +   
Sbjct: 201 LPGILPGVFGGLSVGIGVAWICVISAEMISG------RLGVGYRTWQAYTIVDYPGVFVG 254

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNK 269
           M+T+  + F      +LL R +  W  +
Sbjct: 255 MITIGILGFATSGAVELLGRRVTRWLPR 282


>gi|1384060|dbj|BAA12840.1| membrane component [Escherichia coli]
          Length = 275

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+++ +  A +  IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDRTLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 104/253 (41%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P+ +++ +     P      +L Q+ + +  R++ A+ 
Sbjct: 33  VLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDRTLWQHLAASLTRIMLALF 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++LF          S  +  +L PI+++ + +P L +L   V++F           E +
Sbjct: 93  AAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + ++ +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|126458607|ref|YP_001076166.1| taurine ABC transporter permease [Burkholderia pseudomallei 1106a]
 gi|242311082|ref|ZP_04810099.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|126232375|gb|ABN95788.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|242134321|gb|EES20724.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
          Length = 283

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|158319355|ref|YP_001511862.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
 gi|158139554|gb|ABW17866.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
          Length = 302

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 80/226 (35%), Gaps = 21/226 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++     +  +  +      ++ RV++  II + +  P+ + +G+   I +  + F  
Sbjct: 67  YNFLHAFDNFIGLGSIPRNIGYSIVRVLLGYIIGASVAFPLALLMGYFKPIRNLCENFIN 126

Query: 424 LLAAFPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFN 467
           L    P+  + PLV+       L                N  L +  L+  G  + I  N
Sbjct: 127 LFKPIPSIAWQPLVLGWFGISSLARILGMPYGPQFAIMDNFKLSMIFLIALGAFFPIWGN 186

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +I G +       E A     +    + +I++P   P  + G       +W   + +E+ 
Sbjct: 187 IIFGVTNVRKVLIETAKVLGASQIDIFFHILIPAAGPTIINGMRMGLTASWVCLVSAEML 246

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    +G+G  I  + E      V+ G++ +      L+   
Sbjct: 247 PG-----SMSGVGYLITHAYELARMDLVITGMICIGIIGALLDGVF 287



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 99/230 (43%), Gaps = 22/230 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + S+P+    + +R+L   +I     F  A L    + +  +    +++ + IP + +  
Sbjct: 79  LGSIPRNIGYSIVRVLLGYIIGASVAFPLALLMGYFKPIRNLCENFINLFKPIPSIAWQP 138

Query: 118 FTVVYFMNLYPGKVIGA------------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +F      +++G             +L+ IF I     + +  ++   + N+ + L
Sbjct: 139 LVLGWFGISSLARILGMPYGPQFAIMDNFKLSMIFLIALGAFFPIWGNIIFGVTNVRKVL 198

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E ++    S    F+++ +P + P ++  M M ++  W  +V++EM+        + G+
Sbjct: 199 IETAKVLGASQIDIFFHILIPAAGPTIINGMRMGLTASWVCLVSAEMLPG-----SMSGV 253

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI----VWSNKFR 271
           G  I  A +   +  ++  M+ +  +  L D  +FR +I     W NK +
Sbjct: 254 GYLITHAYELARMDLVITGMICIGIIGALLDG-VFRIVISKNFSWENKVK 302


>gi|315284931|gb|EFU44376.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 354

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  +  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF     +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|316931755|ref|YP_004106737.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315599469|gb|ADU42004.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 278

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                +   ++ R+   +  A  + +P+GI +G    +        Q L       + P+
Sbjct: 79  GEAAKMALPSLARIGGGLAWAIALGVPLGILVGRFKGMRQASSVPFQFLRMISPLAWMPI 138

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V   S +    N  +  L+     W ILF+   G       + +VA +     W     
Sbjct: 139 AVMAFSSW----NGAIVFLIGVAAIWPILFSTAHGFRRIDPAWFKVARNLGARPWHMLFT 194

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P I    + G   A G AW   + +E          T+GLG  I ++ +   +  + 
Sbjct: 195 IIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLG------VTSGLGYAINDARDTLEYDRLA 248

Query: 557 LGVLIMCCFVLALN 570
             V+I+      L+
Sbjct: 249 ATVVIIGLIGFTLD 262



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 14/218 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P    + +   L      + A  +  R+   +  ++        L  + + +       
Sbjct: 64  APLPTFERLWSMLVSGEAAKMALPSLARIGGGLAWAIALGVPLGILVGRFKGMRQASSVP 123

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
              ++ I  L ++   V+ F +           A +F I  + +W + FS       I  
Sbjct: 124 FQFLRMISPLAWMPIAVMAFSSWNG--------AIVFLIGVAAIWPILFSTAHGFRRIDP 175

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              +V+R+     W   + + VP  M   +  + +++   W  +V +E + V        
Sbjct: 176 AWFKVARNLGARPWHMLFTIIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLGV------TS 229

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G+G  I  A    +   +   ++ +  + F  D L  R
Sbjct: 230 GLGYAINDARDTLEYDRLAATVVIIGLIGFTLDFLCER 267


>gi|17988451|ref|NP_541084.1| taurine transport system permease protein TAUC [Brucella melitensis
           bv. 1 str. 16M]
 gi|225686929|ref|YP_002734901.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|254702431|ref|ZP_05164259.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|256042916|ref|ZP_05445862.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256261931|ref|ZP_05464463.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260564151|ref|ZP_05834636.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|261752994|ref|ZP_05996703.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265989350|ref|ZP_06101907.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|81850876|sp|Q8YDR8|Y3107_BRUME RecName: Full=Probable ABC transporter permease protein BMEII0107
 gi|17984237|gb|AAL53348.1| taurine transport system permease protein tauc [Brucella melitensis
           bv. 1 str. 16M]
 gi|225643034|gb|ACO02947.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|260151794|gb|EEW86887.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|261742747|gb|EEY30673.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|263000019|gb|EEZ12709.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091411|gb|EEZ15947.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|326411359|gb|ADZ68423.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326554648|gb|ADZ89287.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 246

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 82/234 (35%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+ + I  + ++      +    +  +    T      ++     ++ RV+   ++   
Sbjct: 13  LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IPVG  +G+     S I+P+ Q     P     PL +  +             ++   
Sbjct: 73  LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G  +        A          +  +I+P   P+ + G     G AW 
Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + +E+ +        +GLG  + ++      P + + ++ +    L ++R L
Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           + G   +   G      P D+++     L    L      +  R+LS  V+ +       
Sbjct: 19  IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L    R    ++ P +   + IP L  +   +V             E   IF IF +  
Sbjct: 79  FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            +   + YQ + ++ R L   +R         F  + VP S+P ++  + + +   W  V
Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264
           VA+E+I          G+G  +  A    DL  I  +++T+  +    D+LL    R + 
Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244

Query: 265 VW 266
            W
Sbjct: 245 QW 246


>gi|163853134|ref|YP_001641177.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664739|gb|ABY32106.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 283

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T + +  A   +L+         A SRR      PILD+MQ++P   +L   +
Sbjct: 87  LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F            ++A FA     V  +       + N+P +L E S +F  S  QK 
Sbjct: 147 PFFGLG--------AVSACFATIVFSVAPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  +M      VV + MI  G       G+G  +  +I+  +  A
Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSIQRLEAGA 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A + ++ V  + D++
Sbjct: 252 GFEAGIGIVIVAVILDRV 269



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368
           N +  L      +                 + +    W C+            + IG + 
Sbjct: 16  NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75

Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +W   + T+  V +    A +I +PVGIW            P   ++  
Sbjct: 76  LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+ V+    +       ++      +     +   ++     G    P++  E + +F 
Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVAPVIRLTALGIRNVPSELVEASDAFG 191

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    + LP   P  + G       A +  +++ +   G       GLG  + +S 
Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSI 244

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
           ++          + +    + L+R
Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268


>gi|54024090|ref|YP_118332.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
 gi|54015598|dbj|BAD56968.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
          Length = 262

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 10/200 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   ++    ++++R+V+ ++IA  + +P+G+ +G        + P  Q L       
Sbjct: 62  LHERGVLLPDIGVSLWRLVLGLLIAVTVGVPLGLLLGLHAATEHALAPVVQFLRMISPLS 121

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+ V+     +      ++        W I+ N  AG  A       VA SF  T   
Sbjct: 122 WAPIAVALFGIGNQPVVFLVAAAA----VWPIVLNTAAGVRAIDPGLLLVARSFGATRRE 177

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LP +     +G   A G AW   + +E+          +GLG  I  + ++ ++
Sbjct: 178 QLTAVVLPAVRGPVQSGLRIALGIAWVVLVPAEMLG------VRSGLGYQILNARDQLAY 231

Query: 553 PEVVLGVLIMCCFVLALNRF 572
            +V+  ++++      L+  
Sbjct: 232 DQVMAVIVVIGALGFVLDGL 251



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P+ +   +    +   L      +  R++  ++I++        L          L P+
Sbjct: 51  GPQHVPGALHALHERGVLLPDIGVSLWRLVLGLLIAVTVGVPLGLLLGLHAATEHALAPV 110

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +  ++ I  L +    V  F       V     A         VW +  +    +  I  
Sbjct: 111 VQFLRMISPLSWAPIAVALFGIGNQPVVFLVAAA--------AVWPIVLNTAAGVRAIDP 162

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L  V+RSF  +  ++   + +P     +   + +++   W  +V +EM+ V        
Sbjct: 163 GLLLVARSFGATRREQLTAVVLPAVRGPVQSGLRIALGIAWVVLVPAEMLGV------RS 216

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G+G  I  A  +     ++  ++ +  + F+ D L
Sbjct: 217 GLGYQILNARDQLAYDQVMAVIVVIGALGFVLDGL 251


>gi|298487238|ref|ZP_07005287.1| inner membrane component of a binding-protein-dependent transport
           system [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298158262|gb|EFH99333.1| inner membrane component of a binding-protein-dependent transport
           system [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 277

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 17/199 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                     SR     L P    ++SIP L ++   +++       KV+   + A F +
Sbjct: 93  GLGICAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPV 152

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +         +   ++  I R L EV + +  S ++    + +P ++PGL   +   MS 
Sbjct: 153 Y--------LNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 204

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  ++   +      +L A++ +  +  L D LL   
Sbjct: 205 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 258

Query: 261 -RPMIVWSNKFRLERTTGI 278
            +  + W + F  +   G 
Sbjct: 259 EKRFLAWRDTFTGQSREGR 277



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 10/167 (5%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W+G      + ++P    L + P+  + PL++  +     +      +L+  G  + +  
Sbjct: 99  WVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSK----VVLIAIGAFFPVYL 154

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N +A          EV   +  + +R  R I+LP   P   TG  +    +W   + +E+
Sbjct: 155 NGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAEL 214

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +       T GLG  +++  E      V+  ++++       +  L
Sbjct: 215 IA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLL 255


>gi|281179685|dbj|BAI56015.1| glycine/betaine/proline ABC transporter permease component
           [Escherichia coli SE15]
          Length = 354

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|88800578|ref|ZP_01116140.1| putative permease [Reinekea sp. MED297]
 gi|88776723|gb|EAR07936.1| putative permease [Reinekea sp. MED297]
          Length = 295

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 102/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+IGII  + +    +      V I  + + +  + +   +T   +    ++S++     
Sbjct: 62  LMIGIILGITYFAARSIKLTIGVGISLLLIGIFGMWEDTMQTLSIITVCTLLSIVLGVPI 121

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               AKS R+  V+ PILD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 122 GIAMAKSNRIQSVITPILDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 175

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + ++ ++ WQ+ W + +P +MP ++  +  ++      
Sbjct: 176 --PVIRLTNLGIRLVDKEVLEAADAYGVTPWQRLWNVQLPLAMPNIMAGINQTIMMALAM 233

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     +     ++ +  ++D++
Sbjct: 234 VVIASMIGV-------KGLGQPVLQSITNQYFTQGVLNGAAIVVLAIIFDRV 278



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 100/286 (34%), Gaps = 19/286 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCV 351
           +L      S      +   + +  R          ENF     +  V +  +L    + +
Sbjct: 3   WLTEFPQLSRRDLLTIRKTLDEAYREFSRNYGEAIENFFDPLLSFLVWFEDLLIATPWWL 62

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVG 405
           + G+ +GI + +   I         L +I +  +      T+  + V  +++ ++ +P+G
Sbjct: 63  MIGIILGITYFAARSIKLTIGVGISLLLIGIFGMWEDTMQTLSIITVCTLLSIVLGVPIG 122

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +     I S I P   ++   PA V+   VV  +        +   + ++      ++
Sbjct: 123 IAMAKSNRIQSVITPILDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIYAIPPVI 178

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E A ++ +T W+    + LP   P  + G       A    +++ 
Sbjct: 179 RLTNLGIRLVDKEVLEAADAYGVTPWQRLWNVQLPLAMPNIMAGINQTIMMALAMVVIAS 238

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +           GLG  + +S     F + VL    +    +  +R
Sbjct: 239 MIG-------VKGLGQPVLQSITNQYFTQGVLNGAAIVVLAIIFDR 277


>gi|311280742|ref|YP_003942973.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308749937|gb|ADO49689.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 275

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 103/271 (38%), Gaps = 19/271 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQ 374
               +R+ +P +     S   +  +L  +W      +   +      Q +  +V+    Q
Sbjct: 10  RRQALRWRWPLSRQLTLSAATLGVILLAWWTVAGLQLIAPLFLPPPGQVLRKLVSIAGAQ 69

Query: 375 DVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +          ++ R+V+ ++ A++I +PVGI +G  P +   + P  +L    P   
Sbjct: 70  GFMDATLWQHLGASLTRIVIALLAATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLA 129

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL+V        +      LL+       +  + +AG  +        A S   +  +
Sbjct: 130 YLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRLRAAQSLGASRAQ 185

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  + 
Sbjct: 186 ILWFVILPGALPDILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
             V+ G+ ++      L    R L   L  +
Sbjct: 240 DVVLAGIAVIAAIAFVLELSLRALQRRLTPW 270



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 99/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +  +    +  + L        P  ++  +            +L Q+   +  R++ A++
Sbjct: 33  VILLAWWTVAGLQLIAPLFLPPPGQVLRKLVSIAGAQGFMDATLWQHLGASLTRIVIALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            + +           S  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + ++ +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRLRAAQSLGASRAQILWFVILPGALPDILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + F+ + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAAIAFVLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 SLRALQRRLTPWH 271


>gi|33594538|ref|NP_882182.1| ABC transport system permease protein [Bordetella pertussis Tohama
           I]
 gi|33564614|emb|CAE43932.1| ABC transport system permease protein [Bordetella pertussis Tohama
           I]
 gi|332383949|gb|AEE68796.1| ABC transport system permease protein [Bordetella pertussis CS]
          Length = 256

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     +  RV+V    A+ + IP+GI++G      +   P    L   P+  +
Sbjct: 55  WEQGSLLDHIVASARRVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSW 114

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +                ++  GT    L  VI             AS+   +G + 
Sbjct: 115 IPLSLLWFGITETQKYS----IVFMGTFAPALLYVIEATRNIDPLLIRAASNLGASGPQV 170

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +ILP   P   +G     G +W   I +E+ +         GLG  I    E     
Sbjct: 171 MRSVILPASLPQIFSGFKVILGLSWTCVISAELVA------AKEGLGFLIMNGKEFFQTD 224

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            VVLG+ ++   VL  +   
Sbjct: 225 TVVLGMALISVTVLVTDVVF 244



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 87/249 (34%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +    +  +          P D+   +    +  SL  +   +  R++     +  
Sbjct: 21  IVLLLFWEAVCRLQWVDALFLPPPSDVFARIGNMWEQGSLLDHIVASARRVMVGFAAATA 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+R      PIL  ++ +P + ++  ++++F      K           
Sbjct: 81  LAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPLSLLWFGITETQKYS--------I 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F          + ++  NI   L   + +   SG Q    + +P S+P +     + + 
Sbjct: 133 VFMGTFAPALLYVIEATRNIDPLLIRAASNLGASGPQVMRSVILPASLPQIFSGFKVILG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  V+++E++   +      G+G  I    +      ++  M  +   + + D   ++
Sbjct: 193 LSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLVTDVVFRI 246

Query: 259 LFRPMIVWS 267
           +   ++ WS
Sbjct: 247 IENRVLAWS 255


>gi|217425152|ref|ZP_03456647.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217391757|gb|EEC31784.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 285

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 93  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 263 AIALALEIGLRALQRRLTPW 282



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 82  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|254185129|ref|ZP_04891718.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|184215721|gb|EDU12702.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
          Length = 283

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|300924083|ref|ZP_07140077.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301330780|ref|ZP_07223378.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|300419679|gb|EFK02990.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300843293|gb|EFK71053.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|320201610|gb|EFW76186.1| Taurine transport system permease protein TauC [Escherichia coli
           EC4100B]
          Length = 275

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPLQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPLQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|261415486|ref|YP_003249169.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371942|gb|ACX74687.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 254

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++ ++V     A+++ I +GI  G  P + + ++P ++  A  P NV+ P  
Sbjct: 55  ELLRSAWSSLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYA 114

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ +  ++L+     + ++     W I  N  AGA+  P  ++  A+   I  + +   I
Sbjct: 115 IAILPTFYLS----STFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRI 170

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                 P   +G     G ++    V+E+          TGLG ++    +   +P +V 
Sbjct: 171 AFVASLPSIFSGLSVGMGLSFIMLTVAELFG------ENTGLGHFVQFYADYSDYPNMVA 224

Query: 558 GVLIMCCFVLALNRFL 573
           G+L     VLA+  F 
Sbjct: 225 GILWTGIVVLAIMEFF 240



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 14/228 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +   I+       +   P     +  +      L + A  + L+++ A   + +      
Sbjct: 23  IWTFISSGPEWSSQYLFPSPKAVLTALFNSREELLRSAWSSLLKLVPAYFAAAVVGISLG 82

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            ++     +G +L PI      IP   ++ + +      Y        L++ F IF +  
Sbjct: 83  IVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY--------LSSTFIIFIAAF 134

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  +      +IP      +    +  ++  W +    S+P +   + + M   +  +
Sbjct: 135 WPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPSIFSGLSVGMGLSFIML 194

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +E+           G+G ++       D   ++  +L    V+   
Sbjct: 195 TVAELFGENT------GLGHFVQFYADYSDYPNMVAGILWTGIVVLAI 236


>gi|52549512|gb|AAU83361.1| sulfonate ABC transporter permease protein [uncultured archaeon
           GZfos27E7]
          Length = 264

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 88/246 (35%), Gaps = 18/246 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----PQYASRTTLRMLSAMVIS 79
           A  L   +I   +        P  +     + L    L    P     + L     +   
Sbjct: 18  AISLCAAVIIWEIVADFIIRNPIKLPSPYAVFLSYLKLWEIIPGDIGISLLHFGIGLGAG 77

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                    L    R     L P+++I++ IP L ++ F +++              AA 
Sbjct: 78  AAVGITVGMLMGWFRVANRALDPMVEILRPIPPLAWVPFAILW--------GGLTHCAAG 129

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY-LGVPFSMPGLVWNMMM 198
           F +F    + +  + Y     + +   + ++       +K    +  PFS+P +   + +
Sbjct: 130 FIVFIGAFFPILLNTYTGFREVDKTYIDAAKVLGCKEERKMIKSVAFPFSLPYIATGIRI 189

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M  GW  VVA+EM  V  +     G+G  +        ++  L A + +LG++ L    
Sbjct: 190 GMGVGWMCVVAAEMFGVSKS-----GLGFRLFQVFWPLHMIDRLVAYMIILGLVALVLDH 244

Query: 259 LFRPMI 264
           LFR  +
Sbjct: 245 LFRYFV 250



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 14/213 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +     I++    + +   + + I VG+ +G+    +  + P  ++L   P   + P
Sbjct: 56  WEIIPGDIGISLLHFGIGLGAGAAVGITVGMLMGWFRVANRALDPMVEILRPIPPLAWVP 115

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWW 494
             +      H         ++  G  + IL N   G       + + A         +  
Sbjct: 116 FAILWGGLTH----CAAGFIVFIGAFFPILLNTYTGFREVDKTYIDAAKVLGCKEERKMI 171

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE-STEKGSFP 553
           + +  P   PY  TG     G  W   + +E+       +  +GLG  + +         
Sbjct: 172 KSVAFPFSLPYIATGIRIGMGVGWMCVVAAEMFG-----VSKSGLGFRLFQVFWPLHMID 226

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +V  ++I+    L L+       Y    R L+
Sbjct: 227 RLVAYMIILGLVALVLDHLFR---YFVEERLLK 256


>gi|289208151|ref|YP_003460217.1| binding-protein-dependent transporters inner membrane component
           [Thioalkalivibrio sp. K90mix]
 gi|288943782|gb|ADC71481.1| binding-protein-dependent transport systems inner membrane
           component [Thioalkalivibrio sp. K90mix]
          Length = 279

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 17/270 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + ++     L R L  +R               ++ +  ++W+     +A      +   
Sbjct: 5   ATMNELNPALERMLPFLRLADQVRRRVQYPAVGIAGLFALWWWGGWL-IANNEDTMAFAS 63

Query: 367 IVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                T      ++  G +      +++RV   +  A  I +P+G+ IG+   +      
Sbjct: 64  FAPGPTLTAFWDLVSSGNVWKPIESSLYRVGWGLFYAIAIGVPLGVMIGYFLTLKQITHV 123

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             Q L       + P+ V   + +          L+     W I +    G       + 
Sbjct: 124 PFQFLRMISPLAWMPIAVLAFATWDG----ASIFLIAIAAIWPITYATAHGVQRIDPMWL 179

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +V S+         RYI++P I      G   A G AW   + +E          T+GLG
Sbjct: 180 KVGSNLGANPIHTLRYIVMPAIAQDVFAGIRLAVGVAWIVLVPAEYLG------VTSGLG 233

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             I ++ +   + ++   VL++      L+
Sbjct: 234 YAINDARDTLEYDKLAAFVLVIGIIGYMLD 263



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 88/266 (33%), Gaps = 19/266 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPIT 55
           M  +  L   + RR+      +     +      L+   ++T       P   +      
Sbjct: 17  MLPFLRLADQVRRRVQYPAVGIAGLFALWWWGGWLIANNEDTMAFASFAPGPTLTAFWDL 76

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +   ++ +    +  R+   +  ++        +      L  +       ++ I  L +
Sbjct: 77  VSSGNVWKPIESSLYRVGWGLFYAIAIGVPLGVMIGYFLTLKQITHVPFQFLRMISPLAW 136

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+ F             A+IF I  + +W +T++    +  I     +V  +   +
Sbjct: 137 MPIAVLAFATWDG--------ASIFLIAIAAIWPITYATAHGVQRIDPMWLKVGSNLGAN 188

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                 Y+ +P     +   + +++   W  +V +E + V        G+G  I  A   
Sbjct: 189 PIHTLRYIVMPAIAQDVFAGIRLAVGVAWIVLVPAEYLGV------TSGLGYAINDARDT 242

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
            +   +   +L +  + ++ D +  R
Sbjct: 243 LEYDKLAAFVLVIGIIGYMLDAICVR 268


>gi|260459647|ref|ZP_05807901.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034449|gb|EEW35706.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 257

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 23/244 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CIT 386
              +  +             AW ++G  VN     D L ++  G              IT
Sbjct: 8   APGLRTVLGISFFVLFVAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILIT 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++RV    ++AS++ +P+GI +G    + + ++PF       PA+ F PL++       L
Sbjct: 68  IWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGEL 127

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L++  G+ + I+  +     +   D  E A +   T     + +I+P   P  
Sbjct: 128 EK----LLVIFVGSVFQIILIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEI 183

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                   G AW   IV+E+         ++G+G  I  S  + +  +++ G++++    
Sbjct: 184 AETLRLVLGWAWTYVIVAELIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIG 237

Query: 567 LALN 570
           L  +
Sbjct: 238 LLSD 241



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+    V++ +            + +   L P +   + +P   F+   +++     
Sbjct: 67  TIWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG- 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL  +  IF   V+ +   +   + +  RDL E + +   +       + +P 
Sbjct: 126 -------ELEKLLVIFVGSVFQIILIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPA 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + + +   W +V+ +E+I          GIG  I  +        I++ ++ 
Sbjct: 179 NAPEIAETLRLVLGWAWTYVIVAELIGSSS------GIGYMIINSQSRLATGQIIFGIIV 232

Query: 248 MLGVIFLYDQLLFRPMIVW 266
           +  +  L D   F+    W
Sbjct: 233 IGLIGLLSD-FAFKAFNRW 250


>gi|239627742|ref|ZP_04670773.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517888|gb|EEQ57754.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 280

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++   +   ++ ++I IP+GI + +   I   + P   L+   P   +
Sbjct: 77  PDSGTLFQHILASLKVALSGYVLGAVIGIPLGICMAWFKRIDLFVTPLFDLVRPVPTIAW 136

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++              + ++        + N  AG          VA +F  +  + 
Sbjct: 137 IPLMILWFGIGLG----AKAAIIFVSAFIPCVINSYAGIKQTKPVHLWVAQTFGASRTKM 192

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P   TG   +   AW     +E+ +         GLG  I  +       
Sbjct: 193 LFTVAIPTAMPLIFTGLRISLQAAWTTLCAAEMLA------ANKGLGYMIQLNRSLARAD 246

Query: 554 EVVLGVLIMCCFVLAL 569
            +++G+L +       
Sbjct: 247 LIIVGMLTIGFIGTIF 262



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDI-------VDIVPITLDVHSLPQYASRTTLRMLS 74
           L+ F  +  +   +LH + + ++P  +         +     D  +L Q+   +    LS
Sbjct: 36  LVMFFGIWYLATAVLHLMPDYSLPSPVQVLEAFIYKLNHKAPDSGTLFQHILASLKVALS 95

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V+  +         A  +R+ + + P+ D+++ +P + ++   +++F     G  +GA
Sbjct: 96  GYVLGAVIGIPLGICMAWFKRIDLFVTPLFDLVRPVPTIAWIPLMILWF-----GIGLGA 150

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           + A IF    S       + Y  +         V+++F  S  +  + + +P +MP +  
Sbjct: 151 KAAIIFV---SAFIPCVINSYAGIKQTKPVHLWVAQTFGASRTKMLFTVAIPTAMPLIFT 207

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S+   W  + A+EM+          G+G  I L         I+  MLT+  +  +
Sbjct: 208 GLRISLQAAWTTLCAAEMLAANK------GLGYMIQLNRSLARADLIIVGMLTIGFIGTI 261

Query: 255 YDQLLFR 261
           +  +L +
Sbjct: 262 FAVVLTK 268


>gi|126447555|ref|YP_001077898.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
 gi|126240409|gb|ABO03521.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
          Length = 283

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|146305523|ref|YP_001185988.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145573724|gb|ABP83256.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 294

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 104/244 (42%), Gaps = 22/244 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P  + L+A  + +G+  I +     T V   ++ +           +    T     S
Sbjct: 46  MLPPAWLLIAIFVGLGLWRIGMRFAVFTAVAFILIVMT-------GFWEQTVVTLGLTFS 98

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           + +ISLL        AAKS R+  ++ P+LD MQ++P   +L    + F     G+V G 
Sbjct: 99  STLISLLLGIPLGIWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLFGL---GRVPGI 155

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFA+  +            +  + +++ E  +SF  +  Q  + + +P +MP ++ 
Sbjct: 156 IATVIFAMPPA-----VRLTSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMA 210

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++      V+ + M+  G       G+G+ +  +I+  D+     + + ++ +  +
Sbjct: 211 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAII 263

Query: 255 YDQL 258
            D++
Sbjct: 264 LDRI 267



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  + +G+    IG     FT    + ++  G      +T+       +I+ ++ IP+G
Sbjct: 52  LLIAIFVGLGLWRIGMRFAVFTAVAFILIVMTGFWEQTVVTLGLTFSSTLISLLLGIPLG 111

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW      +++ I+P    +   PA V+            +   +   +  +        
Sbjct: 112 IWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLFGLGRVPGIIATVIFAMPPAVRL-- 169

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E   SF  T  +    + LP   P  + G       A +  I++ 
Sbjct: 170 --TSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMAGVNQTIMMALSMVIIAS 227

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  +  S ++          + +    + L+R 
Sbjct: 228 MVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAIILDRI 267


>gi|290476212|ref|YP_003469112.1| glycine/betaine/proline ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289175545|emb|CBJ82348.1| glycine/betaine/proline transport protein (ABC superfamily,
           membrane) [Xenorhabdus bovienii SS-2004]
          Length = 364

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +L     A   A + R+  ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 153 FCILIGLPLAIWLAHNERVARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVMVT 209

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E ++SF  S  Q  + + +P +MP ++  + 
Sbjct: 210 IIFA-----LPPIVRLTILGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVN 264

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+         ++ +  + D+
Sbjct: 265 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIILDR 317

Query: 258 L 258
           L
Sbjct: 318 L 318



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 85/227 (37%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           V   +   +AWQ  G  +   ++  ++ +  +G      IT+  V+  ++   +I +P+ 
Sbjct: 103 VTILIFALLAWQLTGAGMGVTSFISLILIGAIGAWSEAMITLALVLTALLFCILIGLPLA 162

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+     ++  ++P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 163 IWLAHNERVARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVMVTIIFALPPIV 218

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P D  E A SF  +  +    + LP   P  + G       A +  +++ 
Sbjct: 219 RLTILGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 278

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G   +    + L+R 
Sbjct: 279 MIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIILDRL 318


>gi|83716597|ref|YP_438999.1| taurine ABC transporter permease [Burkholderia thailandensis E264]
 gi|167615544|ref|ZP_02384179.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257142105|ref|ZP_05590367.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83650422|gb|ABC34486.1| taurine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 283

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 88/255 (34%), Gaps = 13/255 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L   S     + L   +  V   +  G        +V      D   +      ++ 
Sbjct: 36  AAALATWSALVAGWWLAARFEWVSAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLA 95

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+     +A +  IP G+ I     +   + P  +     P   + PL+V        + 
Sbjct: 96  RITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLAYLPLMVVWFGIGDASK 155

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L + L M       +     AGAS         A+S   T  +   +++LP   P  +T
Sbjct: 156 VLLIYLTMFA----PLAIATAAGASGVSESRLRAAASLGATRLKLLCHVVLPSALPDILT 211

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++    +A
Sbjct: 212 GVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGAIAIA 265

Query: 569 LN---RFLWHPLYLY 580
           L    R L   L  +
Sbjct: 266 LEIGLRALQRRLTPW 280



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L Q+   +  R+ +A  ++L+       L A +R +   + PI++  + IP L 
Sbjct: 80  GFDDATLGQHLLASLARITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F      KV+         I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  +   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRLKLLCHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIAIALEIGLRALQRRLTPW 280


>gi|115360505|ref|YP_777642.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115285833|gb|ABI91308.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 295

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L A   +  ++ ++   +    +   I V +  + +    L      T   + +A   S
Sbjct: 42  GLAAVPFIAMVVILVGLALWRRGIAFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         A++ R+GM+L  +LD MQ++P   +L   V+ F            + A+
Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +  +       +  +  +L E  RSF  + WQ  W + +P ++P ++  +  +
Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G Y+   I+  D+       L ++ +  + D+L
Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F  +  + +G+A    G   + F    +L + ++G       T+  V      +
Sbjct: 42  GLAAVPFIAMVVILVGLALWRRGIAFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW      I   ++     +   PA V+    V       +   +   +   
Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   SF  T W+    I LP   P  + G       A
Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +V+ +   G       GLG Y+    ++        G L +    + L+R 
Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265


>gi|237730897|ref|ZP_04561378.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2]
 gi|226906436|gb|EEH92354.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2]
          Length = 263

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 23/248 (9%)

Query: 336 SNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLG--------- 383
           +  +  ++L +  WF  V  VA+     S+G++      + + V+   W           
Sbjct: 2   ATPKNRWLLRLAPWFLPVGLVALWQLASSMGWLSTRILPSPEGVIEAFWTLSASGELWQH 61

Query: 384 -CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I+ +R ++   I   I + +G+  G        +    Q+L   P     PLV+    
Sbjct: 62  LAISSWRALIGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFG 121

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       L+  GT + I  N   G  +      E+A S+ ++G+  + ++ILPG 
Sbjct: 122 I----DESAKIFLVALGTLFPIYINTWHGIRSIDRGLVEMARSYGLSGFSLFVHVILPGA 177

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G   A G  W   IV+E  S         G+G     + E      VV+ +++ 
Sbjct: 178 LPSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILY 231

Query: 563 CCFVLALN 570
                  +
Sbjct: 232 ALLGKLAD 239



 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 107/265 (40%), Gaps = 18/265 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
               F  +  V +  + + +     +    P  +++          L Q+ + ++ R L 
Sbjct: 12  LAPWFLPVGLVALWQLASSMGWLSTRILPSPEGVIEAFWTLSASGELWQHLAISSWRALI 71

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I          ++  SR    +L   + +++++P L  +   +++F           
Sbjct: 72  GFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID-------- 123

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A IF +    ++ +  + +  + +I R L E++RS+ LSG+  F ++ +P ++P ++ 
Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRSIDRGLVEMARSYGLSGFSLFVHVILPGALPSIMV 183

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          GIG     A +      ++ A++    +  L
Sbjct: 184 GVRFALGLMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237

Query: 255 YD---QLLFRPMIVWSNKFRLERTT 276
            D   QLL R  + W   + ++  T
Sbjct: 238 ADVSAQLLERVWLRWHPAYHVKEAT 262


>gi|304405136|ref|ZP_07386796.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304346015|gb|EFM11849.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 306

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 23/257 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPIT------LDVHSLPQYASRTTLRMLSAMV 77
           A + VI +    L G +    P  +   + I       L    L ++   +  R  +   
Sbjct: 63  ALLPVIALAVWQLAGERGWISPTFLPTPIAIAEAFGKLLLSGELLRHLGVSIGRAATGFA 122

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I      +   +    RR   +L P L +++ +P L      +++F           E++
Sbjct: 123 IGGSLGLLLGLVTGLFRRAEYLLDPSLQLLRLVPHLAIAPLIILWFG--------FGEVS 174

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  I T   + +  + +  + N+   L EV+R  + S   +   L VP ++P L   + 
Sbjct: 175 KVVIIMTGAFFPLYINTFLGIRNVDARLFEVARVLQFSWRTRITKLIVPAALPELFIGLR 234

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           +S++  W  +V +E+I          G+G  I LA +E D   I   +L    V  L D 
Sbjct: 235 LSLAVAWIGLVVAELIG------ATSGVGFLINLAKQESDTSTIFVGILIFAIVGKLIDS 288

Query: 257 --QLLFRPMIVWSNKFR 271
             +LL R  + W + ++
Sbjct: 289 LVRLLERKWLFWRDSYQ 305



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 17/265 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R   V+         +          L       V  +A    W S  ++       +
Sbjct: 36  APRDKRVVDEKASGRSNRSVVTDAALGALLPVIALAVWQLAGERGWISPTFLPTPIAIAE 95

Query: 376 VLYVIWLGC-------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               + L         +++ R      I   + + +G+  G        + P  QLL   
Sbjct: 96  AFGKLLLSGELLRHLGVSIGRAATGFAIGGSLGLLLGLVTGLFRRAEYLLDPSLQLLRLV 155

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL++    +  ++      ++++ G  + +  N   G         EVA     
Sbjct: 156 PHLAIAPLIILWFGFGEVSK----VVIIMTGAFFPLYINTFLGIRNVDARLFEVARVLQF 211

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +       +I+P   P    G   +   AW   +V+E+         T+G+G  I  + +
Sbjct: 212 SWRTRITKLIVPAALPELFIGLRLSLAVAWIGLVVAELIG------ATSGVGFLINLAKQ 265

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
           +     + +G+LI       ++  +
Sbjct: 266 ESDTSTIFVGILIFAIVGKLIDSLV 290


>gi|194428846|ref|ZP_03061381.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B171]
 gi|194413149|gb|EDX29436.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           B171]
          Length = 275

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ +  A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALRAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 102/249 (40%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A+  +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALRAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|124382344|ref|YP_001025815.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
 gi|238563141|ref|ZP_00439365.2| taurine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|251767713|ref|ZP_02268181.2| taurine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254176599|ref|ZP_04883257.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           10399]
 gi|254201032|ref|ZP_04907397.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254204997|ref|ZP_04911350.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254359116|ref|ZP_04975388.1| taurine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|147748644|gb|EDK55719.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147754583|gb|EDK61647.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148028303|gb|EDK86263.1| taurine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|160697641|gb|EDP87611.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           10399]
 gi|238521308|gb|EEP84761.1| taurine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243061954|gb|EES44140.1| taurine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|261826754|gb|ABM99472.2| taurine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
          Length = 285

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 93  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 263 AIALALEIGLRALQRRLTPW 282



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 82  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|121593479|ref|YP_985375.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax sp. JS42]
 gi|120605559|gb|ABM41299.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax sp. JS42]
          Length = 400

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 24/264 (9%)

Query: 3   LYNILPPFISRR-----IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD 57
           + N  P F + R         + DLL  V    +I ++     +    R +     ++L 
Sbjct: 104 VENFRPFFQAVRAPIDATLTGVTDLLLAVPAPALIALVTLLAWQFAG-RGLAVGAALSLG 162

Query: 58  VHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +L      A  T   +L++++  ++       + A S R      P+LD MQ+ P   
Sbjct: 163 LVALLGIWPDAMVTLALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFV 222

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   V+ F     G V G  +  +FA     +  +       L  +  DL E SR++  
Sbjct: 223 YLVPVVMLFG---IGNVPGVIVTIVFA-----LPPLVRLTNLGLRQVRPDLIEASRAYGA 274

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q  W + +P +MP ++  +  ++      VV + MI VG       G+G  +   I 
Sbjct: 275 SPLQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIG 327

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL 258
             D+       L ++ +  + D+L
Sbjct: 328 RLDMGLATVGGLGIVLLAIVLDRL 351



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLI 394
           V+ +L       +  +   +AWQ  G  +            +L +     +T+  V+  +
Sbjct: 125 VTDLLLAVPAPALIALVTLLAWQFAGRGLAVGAALSLGLVALLGIWPDAMVTLALVLTSL 184

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +   +I +P+GI +          +P    +   PA V+   VV          N+   +
Sbjct: 185 LFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVI 240

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + I      ++     G      D  E + ++  +  +    + LP   P  + G   A 
Sbjct: 241 VTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPLQLLWKVQLPLAMPSIMAGINQAL 300

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 301 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRL 351


>gi|167828808|ref|ZP_02460279.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167898868|ref|ZP_02486269.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|254186901|ref|ZP_04893417.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254264574|ref|ZP_04955439.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254301413|ref|ZP_04968857.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157811362|gb|EDO88532.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157934585|gb|EDO90255.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254215576|gb|EET04961.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 283

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 91  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 261 AIALALEIGLRALQRRLTPW 280



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 80  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280


>gi|294817927|ref|ZP_06776569.1| ABC transporter related protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326446947|ref|ZP_08221681.1| taurine ABC transporter, permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322742|gb|EFG04877.1| ABC transporter related protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 289

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 80/249 (32%), Gaps = 10/249 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
              P        +  VS +  +  + +   +           +           +     
Sbjct: 35  RPVPGATAAARLSGAVSVLAGVGLWHLATVLGAVGVPGPAPVLARGAELLADGTLTTDAL 94

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    + +   +PVG  +G+ P   + ++P+ Q     P     PL +  +   
Sbjct: 95  ASVRRVLTGFALGTAAALPVGALMGWYPVARALLEPWVQFFRMVPPLAVIPLTIVLLGI- 153

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++          +V  G         + A          +  +++P   P
Sbjct: 154 ---DETPKITVIFLAAFLSTAVSVFQGVLTVDRTLIDAARVLGAREPVIFARVVVPATLP 210

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  TGA    G +W+  + +E+ +         GLG  + ++        + +G+L +  
Sbjct: 211 FLFTGARVGLGASWSTLVAAELIA------AQQGLGYRMQQAQLYYDLETIFVGILAIGS 264

Query: 565 FVLALNRFL 573
             L ++R L
Sbjct: 265 LGLLMDRLL 273



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 84/237 (35%), Gaps = 17/237 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           + G      P  ++      L   +L   A  +  R+L+   +          L      
Sbjct: 64  VLGAVGVPGPAPVLARGAELLADGTLTTDALASVRRVLTGFALGTAAALPVGALMGWYPV 123

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              +L P +   + +P L  +  T+V        K        I  IF +   +   S++
Sbjct: 124 ARALLEPWVQFFRMVPPLAVIPLTIVLLGIDETPK--------ITVIFLAAFLSTAVSVF 175

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q +  + R L + +R         F  + VP ++P L     + +   W  +VA+E+I  
Sbjct: 176 QGVLTVDRTLIDAARVLGAREPVIFARVVVPATLPFLFTGARVGLGASWSTLVAAELIA- 234

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
                   G+G  +  A    DL  I   +L +  +  L D+LL    R    W ++
Sbjct: 235 -----AQQGLGYRMQQAQLYYDLETIFVGILAIGSLGLLMDRLLIAAERRATAWQDR 286


>gi|221069604|ref|ZP_03545709.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220714627|gb|EED69995.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 287

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 16/258 (6%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            S    SP+S  V          R+  P   +   +   +     + +  +   V  G  
Sbjct: 6   PSIKSASPVSVQVASPSVRPARRRYMAPLEPVSPKAKWLLGTGFFLLFLLIWSAVTFGGL 65

Query: 361 WQSIGYIVNHFTYQDVLYVI------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
                        ++ + +           +T++RV+   I+ASI+ +P+GI +G    +
Sbjct: 66  VSPTFLASPLTMLREGILLFTEFDFHHDIGMTVWRVMGGFILASIVAVPLGIAMGAWKPV 125

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            +  +PF       PA+ F PL++               L++  G+ + I   V      
Sbjct: 126 EAFFEPFVSFCRYLPASAFIPLLILWAGVGEAQK----LLVIFIGSVFQITLMVAVTVGG 181

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D  E A +   +     + +++PG  P          G AW   IV+E+        
Sbjct: 182 ARKDLVEAAYTLGASNTGIVKRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------ 235

Query: 535 RTTGLGAYIAESTEKGSF 552
            ++G+G  I +S    + 
Sbjct: 236 SSSGIGHMITDSQALLNT 253



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L F+L+   +    L        P  ++    +             T  R++   +++ 
Sbjct: 50  FLLFLLIWSAVTFGGLVSPTFLASPLTMLREGILLFTEFDFHHDIGMTVWRVMGGFILAS 109

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++       K++        
Sbjct: 110 IVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGEAQKLL-------- 161

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +T  +  ++    +DL E + +   S       + +P + PG+   + + +
Sbjct: 162 VIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAAPGIAETLRLVL 221

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D +  
Sbjct: 222 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDFIFK 275

Query: 259 -LFRPMIVWS 267
            L R M  WS
Sbjct: 276 TLNRRMFEWS 285


>gi|331661741|ref|ZP_08362664.1| taurine transport system permease protein TauC [Escherichia coli
           TA143]
 gi|331060163|gb|EGI32127.1| taurine transport system permease protein TauC [Escherichia coli
           TA143]
          Length = 275

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +         ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWCWPLSRQVTLGIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|296535218|ref|ZP_06897433.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296264457|gb|EFH10867.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 244

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 13/201 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RV+   ++AS+I +P+G+ +G    + +  +PF       PA+ F PL++     
Sbjct: 52  GMTVWRVLGGFVLASVIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGV 111

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++  G+ + I+  V   A A   D  E A +         + +I+P   
Sbjct: 112 GEAQKLS----VIFLGSVFQIVIMVAVIAGATRIDLVEAAYTLGARQGGILKRVIIPAAA 167

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   IV+E+          +G+G  I +S       +++ G++++ 
Sbjct: 168 PQVMEALRLVLGWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIG 221

Query: 564 CFVLALNRFLW---HPLYLYG 581
              L  +         L+ + 
Sbjct: 222 LIGLVTDFLFKALNRRLFRWA 242



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 84/250 (33%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F+ + G++             P   +         ++       T  R+L   V++ 
Sbjct: 7   FVLFIGLWGLVTATGFVQPLFLASPWQALASGWSLFTEYNFAGDVGMTVWRVLGGFVLAS 66

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++       K+         
Sbjct: 67  VIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGVGEAQKLS-------- 118

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +   +         DL E + +           + +P + P ++  + + +
Sbjct: 119 VIFLGSVFQIVIMVAVIAGATRIDLVEAAYTLGARQGGILKRVIIPAAAPQVMEALRLVL 178

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  + +  D   +++ ++ +  +  + D L  
Sbjct: 179 GWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIGLIGLVTDFLFK 232

Query: 259 -LFRPMIVWS 267
            L R +  W+
Sbjct: 233 ALNRRLFRWA 242


>gi|315647564|ref|ZP_07900666.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315277003|gb|EFU40344.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 243

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 81/197 (41%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+ +RV++   + S+I IP G+ IG    I    +PF   +   P   F  L
Sbjct: 36  GTLLQYIGISSYRVLLGWTLGSLIAIPAGLVIGKVGTIRVFAEPFLNFIRFIPPIAFITL 95

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +      +L+++ T + ++ N + G  +   D    A S   + W+   +
Sbjct: 96  FLVWFGIGETSK----VMLIMYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLH 151

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   PY  TG   A G ++ A I +E+ +         G+G  I  S        + 
Sbjct: 152 VIIPATVPYMFTGIRLAMGTSFMAIIGAEMIA------SNEGVGYLIWNSRLFFRTDWIF 205

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++ +       +R +
Sbjct: 206 VGLICLGFMGFLTDRAV 222



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +++++ +G +    P          L   +L QY   ++ R+L    +  L      
Sbjct: 6   IWQLLSLV-YGPEILPGPIYTAKGGYELLMDGTLLQYIGISSYRVLLGWTLGSLIAIPAG 64

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            +  K   + +   P L+ ++ IP + F+T  +V+F      KV+         I  +  
Sbjct: 65  LVIGKVGTIRVFAEPFLNFIRFIPPIAFITLFLVWFGIGETSKVM--------LIMYATF 116

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           + +  +    + ++  D    +RS   S WQ   ++ +P ++P +   + ++M   +  +
Sbjct: 117 FIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVIIPATVPYMFTGIRLAMGTSFMAI 176

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + +EMI   +      G+G  I  +        I   ++ +  + FL D+ +
Sbjct: 177 IGAEMIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGFMGFLTDRAV 222


>gi|283835587|ref|ZP_06355328.1| glycine betaine/L-proline transport system permease protein ProW
           [Citrobacter youngae ATCC 29220]
 gi|291068798|gb|EFE06907.1| glycine betaine/L-proline transport system permease protein ProW
           [Citrobacter youngae ATCC 29220]
          Length = 354

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 63  PLDSWV------TEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPV-------- 108

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    IT+  V+  ++   +
Sbjct: 109 ---AIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAM----ITLALVLTALLFCVV 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|329926378|ref|ZP_08280854.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328939299|gb|EGG35659.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 285

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 17/260 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------Y 373
             +R    +              L   +  +V   A  + W +   +             
Sbjct: 16  TRLRHKRIDRRFLFKLTHAWIGWLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVHL 75

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +I    I+ +R ++  ++   + +  GIW+GF       + P  Q+L   P    
Sbjct: 76  TSSGELIRHLGISSWRALLGFLLGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAI 135

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +    +   +      LL+  G+ + +  N   G  +  N   +VA     + W  
Sbjct: 136 APLFILWFGFGETSK----ILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDM 191

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +I+P   P+   G   + G AW   +V+E+         ++G+G  I ++       
Sbjct: 192 IRRLIVPASLPHIFLGIRLSIGVAWLGLVVAELMG------SSSGIGYIINDARSFSWTT 245

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V +G+L+        +  +
Sbjct: 246 VVFVGILVFALVGKLSDSLV 265



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 91/257 (35%), Gaps = 23/257 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSAMV 77
             V +  II     G      P  +   + I            L ++   ++ R L   +
Sbjct: 38  WLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVHLTSSGELIRHLGISSWRALLGFL 97

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +              S +   ++ P L +++++P L      +++F           E +
Sbjct: 98  LGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFG--------FGETS 149

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I     + +  + +  + ++   L +V+R  + S W     L VP S+P +   + 
Sbjct: 150 KILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIR 209

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+   W  +V +E++          GIG  I  A        +   +L    V  L D 
Sbjct: 210 LSIGVAWLGLVVAELMGSSS------GIGYIINDARSFSWTTVVFVGILVFALVGKLSDS 263

Query: 258 L---LFRPMIVWSNKFR 271
           L   L   ++ W + ++
Sbjct: 264 LVKGLEGRLLRWQDSYK 280


>gi|261251605|ref|ZP_05944179.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
 gi|260938478|gb|EEX94466.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
          Length = 299

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV+ I   L++    +        +  I +    + +   RT   +    ++S++     
Sbjct: 65  LVLAICTGLVYAASRSWKLSLGCFVSLILIGYFGMWEDTMRTLSIITVCTLLSIVLGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E S +F  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMSLSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           VV + MI V        G+G  +  AI  Q     L     ++ +  L+D+
Sbjct: 237 VVIASMIGV-------KGLGQPVLKAITNQYFTLGLLNGFAIVALAILFDR 280



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + +   C     A   +W+                +      T+  + V  +++ +
Sbjct: 60  STPWMLVLAICTGLVYAASRSWKLSLGCFVSLILIGYFGMWEDTMRTLSIITVCTLLSIV 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E +++F  +  +    + LP   P  + G       + +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMSLS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + ++     F   +L    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKAITNQYFTLGLLNGFAIVALAILFDR 280


>gi|87120682|ref|ZP_01076575.1| putative permease [Marinomonas sp. MED121]
 gi|86163910|gb|EAQ65182.1| putative permease [Marinomonas sp. MED121]
          Length = 299

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 99/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L IG+I  +++G   +      V    + + +  +     RT   +    ++S+      
Sbjct: 65  LTIGVILAIVYGASRSWKLCTGVLASLLAIGILGMWDDTMRTLSIITVCTLLSIGIGIPT 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L ++S R   ++ PILD+MQ++P   +L   V+       GK+ G     + A+    
Sbjct: 125 GILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVVMLLG---IGKIPG-----VIAVIIYA 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +       +  + ++  E + +F  +  Q+ + + +P +MP ++  +  ++      
Sbjct: 177 VPPVIRLTNLGIRLVNKETLEAATAFGATAKQRLFGIQLPLAMPTIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L+  L ++ +  ++D++
Sbjct: 237 VVVASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDRV 281



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S         +        +W+    ++       +L +      T+  + V  +++  
Sbjct: 60  ASPWWLTIGVILAIVYGASRSWKLCTGVLASLLAIGILGMWDDTMRTLSIITVCTLLSIG 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP GI +       + + P   ++   PA V+   VV  +        +   + +I  
Sbjct: 120 IGIPTGILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVVMLLGIG----KIPGVIAVIIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  T  +    I LP   P  + G       A  
Sbjct: 176 AVPPVIRLTNLGIRLVNKETLEAATAFGATAKQRLFGIQLPLAMPTIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +V+ +           GLG  + +S     F   +   L +    +  +R
Sbjct: 236 MVVVASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280


>gi|302556295|ref|ZP_07308637.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302473913|gb|EFL37006.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 288

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R+ +   +     +  G+ +G    + S  +P+   L   P   +F L++  +  
Sbjct: 95  GISLRRIAIGAGLGIAAGVIFGLLMGTVGWVRSLFEPWITFLRTLPPLAYFSLLIIWLGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+       +  +     +A P    E A +   + W   R +++P   
Sbjct: 155 ----NEEPKVTLLAVAAFPPVAVSTTTAVAAVPKSLIEAARALGASRWDVVRDVLVPSAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A+++ + +E+ +         G+G  + ++    + P V++G++ + 
Sbjct: 211 PETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVKDAANYNNTPVVLVGIIAIG 264

Query: 564 CFVLALNRFLWH 575
              L ++  L  
Sbjct: 265 VSGLIIDGLLLR 276



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+     + +    ++  L      +  +  P +  ++++P L + +  +
Sbjct: 90  LVEHLGISLRRIAIGAGLGIAAGVIFGLLMGTVGWVRSLFEPWITFLRTLPPLAYFSLLI 149

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       KV    +AA           +  S   ++  +P+ L E +R+   S W   
Sbjct: 150 IWLGINEEPKVTLLAVAAFP--------PVAVSTTTAVAAVPKSLIEAARALGASRWDVV 201

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P  +  + +++   +  +VA+E++        LPGIG  +  A    +   
Sbjct: 202 RDVLVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPV 255

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L  ++ +     + D LL R
Sbjct: 256 VLVGIIAIGVSGLIIDGLLLR 276


>gi|239630003|ref|ZP_04673034.1| ABC-type proline/glycine betaine transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527615|gb|EEQ66616.1| ABC-type proline/glycine betaine transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 293

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F++++  +   L   Q+         +  + +      +  ++T   +L+A +++++
Sbjct: 64  IWLFIILVLALTWYLKRDQKYRSLLIFELLGLLLIWNLGFWRDMTQTLTLVLTASLLAIV 123

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+S+ +  V+ P++D MQ++P   +L   V +F     G V G   + IFA
Sbjct: 124 IGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 180

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +P DL E + +F  +GWQ+   + +PF+   ++  +  SM 
Sbjct: 181 MP-----PTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGTIMAGINQSMM 235

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A L ++ +  + D++
Sbjct: 236 LALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 285



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++A +I +P+GIW      +S+ ++P    +   PA V+    V+      
Sbjct: 110 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 169

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +          +     G +  P D  E A +F  TGW+    + LP     
Sbjct: 170 VPGVVASVIF----AMPPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGT 225

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A +  +++ +           GLG  +  +  +       +  L +   
Sbjct: 226 IMAGINQSMMLALSMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVIL 278

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 279 AIILDRI 285


>gi|239834174|ref|ZP_04682502.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822237|gb|EEQ93806.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 301

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LLA   V G+  + L  +        I   + + L +H  L      +   +L++ VI++
Sbjct: 44  LLAVPPVGGVAVLALLSLWRVGWKFAIFTALALGLIIHMDLWTGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ P+LD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDTIASIVRPVLDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHSEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 86/234 (36%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIG--YIVNHFTYQDVLYV-IWLGCI-TMFRVVVLIIIAS 398
           +L +     V  +A+   W+      I        ++++ +W G + ++  V+   +IA 
Sbjct: 44  LLAVPPVGGVAVLALLSLWRVGWKFAIFTALALGLIIHMDLWTGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     I+S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDTIASIVRPVLDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G     ++F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHSEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|227113085|ref|ZP_03826741.1| putative aliphatic sulfonates transport permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 264

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 104/264 (39%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R  P +  +   V     +       +    P  ++      +    L Q+ + +  
Sbjct: 8   LAQRFAPFLLPVTLLVAWQVSVEFGWLSNRILPAPSSVITAGWSLISSGELWQHLAISGW 67

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L    I      V   +   SR    +L   + +++++P L  +   +++F       
Sbjct: 68  RALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F  + +P ++P
Sbjct: 124 ----EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGALP 179

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 180 SIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R  + W+  ++
Sbjct: 234 LGKLADVSAQGLERIWLRWNPAYQ 257



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G   G        +    Q++   P     PLV+     
Sbjct: 63  AISGWRALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + +  N   G         E+A S+ ++G   +  ++LPG  
Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239


>gi|326794337|ref|YP_004312157.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545101|gb|ADZ90321.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 299

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++GII  L+  +  +      V    + +    + +   RT   +     +S+      
Sbjct: 65  LILGIIAGLVFFLSRSWKLSLGVTASLLAIGYFGMWEDTMRTLSIITVCTFLSIAIGVPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A+S R   ++ P+LDIMQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GILMARSNRAQSIITPLLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVIIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +P +  E + ++  +  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVPHETLEAATAYGATPTQRLFGVQLPLAMPTIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIMFDRV 281



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    I          +  +W+    +           +      T+  + V   ++  I
Sbjct: 61  TPWWLILGIIAGLVFFLSRSWKLSLGVTASLLAIGYFGMWEDTMRTLSIITVCTFLSIAI 120

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +       S I P   ++   PA V+   VV  +        +   + +I   
Sbjct: 121 GVPIGILMARSNRAQSIITPLLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVIIYA 176

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G    P++  E A+++  T  +    + LP   P  + G       A   
Sbjct: 177 IPPVIRLTNLGIRLVPHETLEAATAYGATPTQRLFGVQLPLAMPTIMAGINQTIMMALAM 236

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 237 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIMFDR 280


>gi|269967305|ref|ZP_06181368.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828083|gb|EEZ82354.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 299

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 95/232 (40%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++G+   L++    +           I +    + +   RT   +    ++++     
Sbjct: 64  FIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S  +  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMARSNHIQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ + + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I   C     A   +W+                +      T+  + V  ++A  
Sbjct: 60  STPWFIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +    HI S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNHIQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|167820438|ref|ZP_02452118.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 91]
          Length = 255

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 63  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 123 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 179 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 232

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 233 AIALALEIGLRALQRRLTPW 252



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 52  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 111

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 112 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 163

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 164 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 217

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 218 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 252


>gi|166032562|ref|ZP_02235391.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC
           27755]
 gi|166026919|gb|EDR45676.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC
           27755]
          Length = 220

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 5/213 (2%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           N ++         R+       +  +      ++   W      VA    +     +V  
Sbjct: 12  NRMQAATNNADRNRWRKLGGKNRNFAALIALIIICGIWTVAAHVVAKPFIFPYFEDVVKE 71

Query: 371 FTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             Y    +YV+    ITM RV+   + A II +P+G+ +G+ P I   + PF   L   P
Sbjct: 72  VIYSLSDMYVLRNLGITMRRVMTGALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVP 131

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + PL +                L+ F   + I+ N I+G      DF   A S    
Sbjct: 132 IMAWVPLAIVWFGIGDG----PTIFLIAFSGVFTIILNTISGVQDISKDFYNAARSMGAN 187

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                + I+LPG  P  +TG   A G  W + I
Sbjct: 188 TLNIIKDIVLPGSLPGVMTGVRLAIGLGWMSVI 220



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 85/194 (43%), Gaps = 11/194 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTV-PR--DIVDIVPITLDVHSLPQYASRTTLRMLS 74
           N   L+A +++ GI  +  H + +  + P   D+V  V  +L    + +    T  R+++
Sbjct: 35  NFAALIALIIICGIWTVAAHVVAKPFIFPYFEDVVKEVIYSLSDMYVLRNLGITMRRVMT 94

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             + + +       +   S ++   L P ++ ++ +PI+ ++   +V+F           
Sbjct: 95  GALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVPIMAWVPLAIVWFGIGDGP----- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IF I  S V+ +  +    + +I +D    +RS   +       + +P S+PG++ 
Sbjct: 150 ---TIFLIAFSGVFTIILNTISGVQDISKDFYNAARSMGANTLNIIKDIVLPGSLPGVMT 206

Query: 195 NMMMSMSGGWFFVV 208
            + +++  GW  V+
Sbjct: 207 GVRLAIGLGWMSVI 220


>gi|153832168|ref|ZP_01984835.1| inner membrane protein [Vibrio harveyi HY01]
 gi|156977775|ref|YP_001448681.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           harveyi ATCC BAA-1116]
 gi|148871479|gb|EDL70334.1| inner membrane protein [Vibrio harveyi HY01]
 gi|156529369|gb|ABU74454.1| hypothetical protein VIBHAR_06563 [Vibrio harveyi ATCC BAA-1116]
          Length = 299

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++G+   L++    +        +  I +    + +   RT   +    ++++      
Sbjct: 65  IILGVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + +F  S  Q+   + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + I   C     A   +W+                +      T+  + V  ++A  
Sbjct: 60  STPWMIILGVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|53722593|ref|YP_111578.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|226195983|ref|ZP_03791569.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|52213007|emb|CAH39045.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|225931876|gb|EEH27877.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 285

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 93  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 263 AIALALEIGLRALQRRLTPW 282



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 82  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282


>gi|317062411|ref|ZP_07926896.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium ulcerans ATCC 49185]
 gi|313688087|gb|EFS24922.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium ulcerans ATCC 49185]
          Length = 256

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 95/258 (36%), Gaps = 16/258 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI------GYIVNHFTYQDVLYVIWLGCIT 386
           +L   +     L      V    +    W S         + +     +   +I    I+
Sbjct: 3   RLKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGIS 62

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R+ +   I   + +P+GI+ G   +I +  +   +     P     P+++        
Sbjct: 63  LRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGET 122

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      ++++  + + +  NV+ G       + EV   F ++    +  IILP   P  
Sbjct: 123 SK----IVIIVLASFFPVFLNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPNSVPDI 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G     G +W A I +E+ +       ++G+G  I ++ +      V+LG++++    
Sbjct: 179 LIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDIVMLGIIVIGTLG 232

Query: 567 LALNRFLWHPLYLYGTRC 584
           +  +      +  Y  R 
Sbjct: 233 IITDNIFSKAVSAYIKRK 250



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 96/269 (35%), Gaps = 15/269 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
             + R     ++ +   ++V  + +   L        P  IV      ++   L ++   
Sbjct: 2   DRLKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGI 61

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     I++               +      I +  +  P L  +   +++F    
Sbjct: 62  SLRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGE 121

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K++   LA+ F +F         ++ + +    +   EV + F +S    F  + +P 
Sbjct: 122 TSKIVIIVLASFFPVF--------LNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPN 173

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P ++  + + +   W  ++ +E+I          GIG  I  A +      ++  ++ 
Sbjct: 174 SVPDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIV 227

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +  +  + D +  + +  +  + + +   
Sbjct: 228 IGTLGIITDNIFSKAVSAYIKRKQGDYVE 256


>gi|150396346|ref|YP_001326813.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150027861|gb|ABR59978.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 267

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 84/261 (32%), Gaps = 13/261 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
                 L   +   +++ L I ++  +    + +                   +      
Sbjct: 15  RLSSANLAPIALNLIAFTLAIGFWWGITAAKLVVLPGPAEVFQRAIELIASGQLPLDIAS 74

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   ++     IPVG  +G+   + + I+P+ Q     P     PL +  +    
Sbjct: 75  SLRRVLTGFLLGVAAAIPVGFLMGWYGPVRALIEPYIQFFRMVPPLAIIPLAIVTMGI-- 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++   +    +     G  +        A          +  +I+P   P+
Sbjct: 133 --DEAPKVFVIFLASFLSCVVATYQGVISVDRTLISAARVLGANDGVLFHRVIIPASIPF 190

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   + +E+ +        +GLG  + ++      P + + ++ +   
Sbjct: 191 ILVGVRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVTIGIL 244

Query: 566 VLALNRFLW---HPLYLYGTR 583
            L ++R +      L  +  R
Sbjct: 245 GLLMDRIVQATERRLTRWQER 265



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 103/266 (38%), Gaps = 18/266 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             S  + P   +L+AF L IG    +    +     P ++       +    LP   + +
Sbjct: 16  LSSANLAPIALNLIAFTLAIGFWWGITAAKLVVLPGPAEVFQRAIELIASGQLPLDIASS 75

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L+  ++ +        L      +  ++ P +   + +P L  +   +V       
Sbjct: 76  LRRVLTGFLLGVAAAIPVGFLMGWYGPVRALIEPYIQFFRMVPPLAIIPLAIVTMGID-- 133

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E   +F IF +   +   + YQ + ++ R L   +R    +    F  + +P S
Sbjct: 134 ------EAPKVFVIFLASFLSCVVATYQGVISVDRTLISAARVLGANDGVLFHRVIIPAS 187

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + + +   W  VVA+E+I          G+G  +  A    DL  I  +++T+
Sbjct: 188 IPFILVGVRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVTI 241

Query: 249 LGVIFLYDQLL---FRPMIVWSNKFR 271
             +  L D+++    R +  W  + R
Sbjct: 242 GILGLLMDRIVQATERRLTRWQERAR 267


>gi|21243923|ref|NP_643505.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109531|gb|AAM38041.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 264

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  V + I   I   +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G  +      E+A ++ + G + +R ++LPG  
Sbjct: 123 ----DEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNYGLRGPQLFRDVLLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VV+ +++  
Sbjct: 179 PSILVGLRFALGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239



 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 15/225 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +    L Q+ + ++ R    + I     F    L    R    +L 
Sbjct: 39  LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 99  SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGIRSV 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R++ L G Q F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DPALIEMARNYGLRGPQLFRDVLLPGALPSILVGLRFALGLMWLTLIVAETISASS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             GIG     A +      ++ A++    +  L D L  R +  W
Sbjct: 207 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 248


>gi|15598639|ref|NP_252133.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107102977|ref|ZP_01366895.1| hypothetical protein PaerPA_01004046 [Pseudomonas aeruginosa PACS2]
 gi|218890357|ref|YP_002439221.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236397|ref|ZP_04929720.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719]
 gi|254242129|ref|ZP_04935451.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192]
 gi|9949584|gb|AAG06831.1|AE004765_4 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126168328|gb|EAZ53839.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719]
 gi|126195507|gb|EAZ59570.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192]
 gi|218770580|emb|CAW26345.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 262

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++ R+ P    L+   +    +       +    P  +++     L    + Q+ + + 
Sbjct: 6   RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R     +I      V   +   S+     L   + +++++P L  +   +++F      
Sbjct: 66  WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +    ++ +  + Y  +  I   L E++RS+ LSG+  F  + +P ++
Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I          GIG     A +      ++ A+L   
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273
            +  L D   + L R  + W   ++++
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258



 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           +R++          V   A+   W S   +       +  + +           I+ +R 
Sbjct: 9   ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 69  AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +L+        +
Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238


>gi|320332813|ref|YP_004169524.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319754102|gb|ADV65859.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 296

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 96/251 (38%), Gaps = 18/251 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A ++         H   +    P  +V  +        L  +   +  R    ++I   
Sbjct: 59  VALLVAWQWAASTGHLNARVLPAPSAVVTALIDLARSGELWTHFLASLQRAGVGVLIGGT 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+   L   SR   ++L     ++++IP L  +   +V+F     GK        +F 
Sbjct: 119 LGFLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGK--------VFL 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  +    +  I   L+E++R + LS  + F  + +P ++PG++  +  ++ 
Sbjct: 171 IALATYFPVYLNTVHGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALG 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V SE            GIG     A +      I+ A++    +    D   ++
Sbjct: 231 ISWLALVVSESFGAS------RGIGFLAMDAREFFRTDVIVLAIVIYALIGKAADGLVRV 284

Query: 259 LFRPMIVWSNK 269
           L + ++ W  +
Sbjct: 285 LEQRLLPWRGR 295



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ ++   W      +   +       +           +      ++ R  V ++I   
Sbjct: 59  VALLVAWQWAASTGHLNARVLPAPSAVVTALIDLARSGELWTHFLASLQRAGVGVLIGGT 118

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +GI  G        +    Q+L   P     PLV+                L+   
Sbjct: 119 LGFLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGK----VFLIALA 174

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + +  N + G        KE+A  + ++    +R + LPG  P  + G   A G +W 
Sbjct: 175 TYFPVYLNTVHGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALGISWL 234

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A +VSE          + G+G    ++ E      +VL ++I      A +  +
Sbjct: 235 ALVVSESFG------ASRGIGFLAMDAREFFRTDVIVLAIVIYALIGKAADGLV 282


>gi|303328242|ref|ZP_07358680.1| taurine ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302861572|gb|EFL84508.1| taurine ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 260

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 74/192 (38%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +++ RV++  + A ++ IP+G+ +G    + +      +     P   ++ L+V
Sbjct: 63  LFYHCMVSLGRVLLGWLAACVVAIPLGLAMGLSSKVRAVFDYLIEFYRPLPPLAYYTLLV 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +      LL+       +    + G         + A S      + +  II
Sbjct: 123 LWFGIGEFSK----ILLLFLAAIPPLTIGAVEGVKEVSPSVIQAARSLGADSRQVFCRII 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +T    + G  +   + +E+ +       T G+G  + ++++      + +G
Sbjct: 179 LPATTPAIITSMRISLGFTYTVLVAAEIVA------ATEGIGWMVWDASKFMRSDIIFVG 232

Query: 559 VLIMCCFVLALN 570
           ++ M    + L+
Sbjct: 233 IITMGVTGIGLD 244



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+L   + + +           S ++  V   +++  + +P L + T 
Sbjct: 61  RGLFYHCMVSLGRVLLGWLAACVVAIPLGLAMGLSSKVRAVFDYLIEFYRPLPPLAYYTL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + I  +F + +  +T    + +  +   + + +RS      Q
Sbjct: 121 LVLWFGIG--------EFSKILLLFLAAIPPLTIGAVEGVKEVSPSVIQAARSLGADSRQ 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P ++ +M +S+   +  +VA+E++          GIG  +  A K    
Sbjct: 173 VFCRIILPATTPAIITSMRISLGFTYTVLVAAEIVA------ATEGIGWMVWDASKFMRS 226

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             I   ++TM       D   +   + ++ W
Sbjct: 227 DIIFVGIITMGVTGIGLDACLRFAAKHLLRW 257


>gi|124485881|ref|YP_001030497.1| hypothetical protein Mlab_1061 [Methanocorpusculum labreanum Z]
 gi|124363422|gb|ABN07230.1| binding-protein-dependent transport systems inner membrane
           component [Methanocorpusculum labreanum Z]
          Length = 280

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
            ++I +  +++  +    +   I+ ++ + L     L   +  T + +L A VI+L  + 
Sbjct: 51  PVLIALTGVIVWFVTRHDIKMTILTMLGLVLIWDLGLWDLSMLTVVLVLIATVIALALSI 110

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA+S  L   L PILD MQ++P   +L   V++F     G V G     IFA+  
Sbjct: 111 PIGIGAARSDTLNAALRPILDFMQTMPSFVYLIPAVIFFGL---GSVPGIIATVIFAMPP 167

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +            +  +P +L EV+ +F  +  QK + + +P ++P ++  +   +    
Sbjct: 168 A-----LRLTTLGIRQVPVELIEVADAFGATPRQKLFKVQLPVALPTIMAGVNQCIMLAL 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              V + MI  G       G+G  + + I+  D+     A L ++ +  ++D++
Sbjct: 223 SMTVIASMIGAG-------GLGYQVLVGIQRVDIGMGFEAGLAIVILAIIFDRI 269



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 17/276 (6%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +        +  S  +  +   L V+     +  L + +   ++    I WF     + 
Sbjct: 11  AVEAIVDWIETYFSWLLDAISDGLRVLVNGLEDILLAVPAPVLIALTGVIVWFVTRHDIK 70

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + I       ++      D      L  +T+  V++  +IA  + IP+GI       +++
Sbjct: 71  MTILTMLGLVLIWDLGLWD------LSMLTVVLVLIATVIALALSIPIGIGAARSDTLNA 124

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P    +   P+ V+    V       +   +   +          L     G    P
Sbjct: 125 ALRPILDFMQTMPSFVYLIPAVIFFGLGSVPGIIATVIF----AMPPALRLTTLGIRQVP 180

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  EVA +F  T  +    + LP   P  + G       A + ++++ +   G      
Sbjct: 181 VELIEVADAFGATPRQKLFKVQLPVALPTIMAGVNQCIMLALSMTVIASMIGAG------ 234

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            GLG  +    ++          L +    +  +R 
Sbjct: 235 -GLGYQVLVGIQRVDIGMGFEAGLAIVILAIIFDRI 269


>gi|253583587|ref|ZP_04860785.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251834159|gb|EES62722.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 256

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 90/244 (36%), Gaps = 16/244 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH------FTYQDVLYVIWLGCIT 386
            L   +     L +    +    +    W S                 +   +I    I+
Sbjct: 3   SLKREKLKGIYLIVLILFIWTAGSHYGLWNSYIIPAPTKIIDSFVKLIENGKLIKHIAIS 62

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R+ +   I   + +P+GI+ G   ++    +   +     P     P+++        
Sbjct: 63  LRRIFIGFSITVFLAVPLGIFFGAFTNVYVYFKSIFEFFRHTPPLALIPMIILWFGIGET 122

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      +++I  + + +  NV+ G       + EV   F+++    +  IILP   P  
Sbjct: 123 SK----IVIIILASFFPVFLNVLKGVGGCDKKYIEVGKVFNLSQKDIFLKIILPNSVPDI 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G     G +W A I +E+ +       ++G+G  I ++ +      V+LG++++    
Sbjct: 179 LIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDIVMLGIIVIGTLG 232

Query: 567 LALN 570
           +  +
Sbjct: 233 IITD 236



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 96/260 (36%), Gaps = 15/260 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           + R     I+ ++  + +    +   L        P  I+D     ++   L ++ + + 
Sbjct: 4   LKREKLKGIYLIVLILFIWTAGSHYGLWNSYIIPAPTKIIDSFVKLIENGKLIKHIAISL 63

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+     I++               + +    I +  +  P L  +   +++F      
Sbjct: 64  RRIFIGFSITVFLAVPLGIFFGAFTNVYVYFKSIFEFFRHTPPLALIPMIILWFGIGETS 123

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K++   LA+ F +F         ++ + +    +   EV + F LS    F  + +P S+
Sbjct: 124 KIVIIILASFFPVF--------LNVLKGVGGCDKKYIEVGKVFNLSQKDIFLKIILPNSV 175

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + + +   W  ++ +E+I          GIG  I  A +      ++  ++ + 
Sbjct: 176 PDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIVIG 229

Query: 250 GVIFLYDQLLFRPMIVWSNK 269
            +  + D +  + +  +  +
Sbjct: 230 TLGIITDNVFSKIVSTYIKR 249


>gi|20090989|ref|NP_617064.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           acetivorans C2A]
 gi|19916076|gb|AAM05544.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina
           acetivorans C2A]
          Length = 276

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 16/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           L I +I +L +   +  +   I       L D   L   +  T   +LS+ +++L+    
Sbjct: 52  LFILVIALLAYFAGKRNLKLAIGTAFGFFLIDNMGLWTLSMETLALVLSSALLALIIGIP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L+AK+  L   L P LD MQ++P   +L   +++F     G V G     +FA+  +
Sbjct: 112 TGILSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFFGL---GNVPGMIATVVFAMPPA 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +P++L EV+ +F  +GWQK   + +P ++P ++  +   +     
Sbjct: 169 -----IRLTNLGIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI          G+G  +   I+  D+     A L ++ +  + D++
Sbjct: 224 MVVIAAMI-------GARGLGYQVLFGIQRVDIGLGFEAGLAIVIIAVVLDRV 269



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 14/228 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
            +  V+  +A     +++   +     F   D + +  L   T+  V+   ++A II IP
Sbjct: 52  LFILVIALLAYFAGKRNLKLAIGTAFGFFLIDNMGLWTLSMETLALVLSSALLALIIGIP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI       +   ++P    +   P  V+    +      ++   +   +         
Sbjct: 112 TGILSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFFGLGNVPGMIATVVF----AMPP 167

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            +     G    P +  EVA +F  TGW+    + LP   P  + G       + +  ++
Sbjct: 168 AIRLTNLGIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + +           GLG  +    ++          L +    + L+R
Sbjct: 228 AAMIG-------ARGLGYQVLFGIQRVDIGLGFEAGLAIVIIAVVLDR 268


>gi|300869325|ref|ZP_07113916.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
 gi|300332702|emb|CBN59114.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
          Length = 283

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +++RV V    AS+  IP+G+ +G  P I + ++P   L+   PA  F PL
Sbjct: 82  GDLLKDTVASLWRVGVGFFFASLFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPL 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +             L+  G  ++    V+        D  E         W    +
Sbjct: 142 LILYLGIG----EEPKITLIFIGVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTH 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P + P  +  +      AW   IVSE+ +       T GLG  I+ +       E+ 
Sbjct: 198 VIVPHVLPGIIDASRINFAAAWQLVIVSELIA------ATEGLGRRISVAGRFLKTDEIF 251

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++++    L  +   
Sbjct: 252 VGLIVIGVIGLTFDLLF 268



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 97/246 (39%), Gaps = 15/246 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +L   +   +    +    P ++++          L +    +  R+      + LF+ 
Sbjct: 48  LLLWWLVTTFIKVDPKFLPSPGNVLEAFGRLWSSGDLLKDTVASLWRVGVGFFFASLFSI 107

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +      +  +L PI  +M+ +P   F+   ++Y            E   I  IF 
Sbjct: 108 PIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLGIG--------EEPKITLIFI 159

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              +  +  +  ++  + +DL E +     + W+   ++ VP  +PG++    ++ +  W
Sbjct: 160 GVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTHVIVPHVLPGIIDASRINFAAAW 219

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             V+ SE+I   +      G+G  I++A +      I   ++ +  +   +D LLF+ M+
Sbjct: 220 QLVIVSELIAATE------GLGRRISVAGRFLKTDEIFVGLIVIGVIGLTFD-LLFQYML 272

Query: 265 VWSNKF 270
             S K+
Sbjct: 273 QVSCKW 278


>gi|156932792|ref|YP_001436708.1| glycine betaine transporter membrane protein [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156531046|gb|ABU75872.1| hypothetical protein ESA_00588 [Cronobacter sakazakii ATCC BAA-894]
          Length = 356

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V + L         A  T   +L+A++  +
Sbjct: 103 LLGMPAPVAIILFALIAWQISGVGMGVATLVSLILIGAIGAWSQAMVTLALVLTALLFCV 162

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 163 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 219

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E +RSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 220 A-----LPPVVRLTILGINQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTL 274

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 275 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 325



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 94/280 (33%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              R++        +      + +   +  I   F +  L + +   +     I W    
Sbjct: 65  PLDRWVTEGIDWVVTHFRPLFQGIRVPVDYILNAFQQLLLGMPAPVAIILFALIAWQISG 124

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+ +      I            +       +T+  V+  ++   +I +P+GIW+   P
Sbjct: 125 VGMGVATLVSLI--------LIGAIGAWSQAMVTLALVLTALLFCVVIGLPLGIWLARSP 176

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  I+P    +   PA V+   +V          N+   ++ I      ++   I G 
Sbjct: 177 RAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 232

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P D  E A SF  +  +    + LP   P  + G       A +  +++ + + G  
Sbjct: 233 NQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTLMLALSMVVIASMIAVG-- 290

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 291 -----GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 325


>gi|49083004|gb|AAT50902.1| PA3443 [synthetic construct]
          Length = 263

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++ R+ P    L+   +    +       +    P  +++     L    + Q+ + + 
Sbjct: 6   RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R     +I      V   +   S+     L   + +++++P L  +   +++F      
Sbjct: 66  WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +    ++ +  + Y  +  I   L E++RS+ LSG+  F  + +P ++
Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I          GIG     A +      ++ A+L   
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273
            +  L D   + L R  + W   ++++
Sbjct: 232 VLGKLADLAARGLGRVWLRWHPAYQVK 258



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           +R++          V   A+   W S   +       +  + +           I+ +R 
Sbjct: 9   ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 69  AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +L+        +
Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238


>gi|294085665|ref|YP_003552425.1| nitrate ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665240|gb|ADE40341.1| nitrate ABC transporter, permease protein, putative [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 277

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV+   ++A I+ IP G+ +    +      P  ++L   P   + P  +     +
Sbjct: 80  ASFQRVLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVPASLI----F 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + ++ +   G  + I+ NV+ GA A    +   A S   + W  +  IILPG  P
Sbjct: 136 WPTNEMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TGA    G  W   + +E+ S G        LG +I  S   GS   +V+G++ +  
Sbjct: 196 SIFTGAAVGMGITWEVVLAAEMISGGGTQGGGG-LGFFIWSSYMGGSLEHIVVGMISIGI 254

Query: 565 FVLALNRFL---------WHPLY 578
                +  +         W  L+
Sbjct: 255 AGYLCSSSIRKLGIFFMPWRRLF 277



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 98/243 (40%), Gaps = 16/243 (6%)

Query: 19  IFDLLAFVLVIGIINIL-------LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           I  +  F++V     ++       + GI     P D++      +      Q    +  R
Sbjct: 25  IMSIFVFLVVWQFGALIDDWTGYDMLGIGLVPPPVDVLITWADVVPNLGYWQSWVASFQR 84

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+  +++++    +  + A ++    +  P  +I++ IP L ++  +++++        
Sbjct: 85  VLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVPASLIFW-------- 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E++  F  F    + +  ++      I       ++S   S W  F+ + +P ++P 
Sbjct: 137 PTNEMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLPS 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +     + M   W  V+A+EMI  G T      +G +I  +     L  I+  M+++   
Sbjct: 197 IFTGAAVGMGITWEVVLAAEMISGGGTQGGGG-LGFFIWSSYMGGSLEHIVVGMISIGIA 255

Query: 252 IFL 254
            +L
Sbjct: 256 GYL 258


>gi|167907187|ref|ZP_02494392.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei NCTC 13177]
          Length = 256

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 64  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 124 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 180 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 233

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 234 AIALALEIGLRALQRRLTPW 253



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 53  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 112

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 113 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 164

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 165 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 218

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 219 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 253


>gi|84385528|ref|ZP_00988559.1| putative permease [Vibrio splendidus 12B01]
 gi|218709515|ref|YP_002417136.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32]
 gi|84379508|gb|EAP96360.1| putative permease [Vibrio splendidus 12B01]
 gi|218322534|emb|CAV18693.1| ABC transporter: transmembrane protein (IM) [Vibrio splendidus
           LGP32]
          Length = 299

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 95/232 (40%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ +   L++    +        +  + +    + +   RT   +    ++S+     
Sbjct: 64  IIVLAVCTSLVYAASRSWKLALGCVVSLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LDIMQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ W + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L     ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + +   C     A   +W+     V          +      T+  + V  +++  
Sbjct: 60  STPWIIVLAVCTSLVYAASRSWKLALGCVVSLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +       S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   ++    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280


>gi|282862841|ref|ZP_06271902.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282562527|gb|EFB68068.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 286

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 80/196 (40%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y++    I++ R+ +   I     +  G+ +G    + S  +P+   L   P   +F L+
Sbjct: 87  YLLEHLGISLRRIALGAGIGIAAGVVFGLLMGTVRWVRSLFEPWITFLRTLPPLAYFSLL 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             L+       +  +     +A P+   E A +   + W   R +
Sbjct: 147 IIWLGI----NEEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGASRWDVVRDV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  +TG   A G A+++ + +E+ +         G+G  + ++    + P V++
Sbjct: 203 LVPSALPETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVRDAANYNNTPVVLV 256

Query: 558 GVLIMCCFVLALNRFL 573
           G++ +    L ++  L
Sbjct: 257 GIIAIGVSGLVIDGLL 272



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 80/200 (40%), Gaps = 14/200 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+     I +    V+  L    R +  +  P +  ++++P L + +  +
Sbjct: 88  LLEHLGISLRRIALGAGIGIAAGVVFGLLMGTVRWVRSLFEPWITFLRTLPPLAYFSLLI 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            E   I  +  +    +  S   ++  +P  L E +R+   S W   
Sbjct: 148 IWLGIN--------EEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGASRWDVV 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P  +  + +++   +  +VA+E++        LPGIG  +  A    +   
Sbjct: 200 RDVLVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVRDAANYNNTPV 253

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           +L  ++ +     + D LL 
Sbjct: 254 VLVGIIAIGVSGLVIDGLLL 273


>gi|86146033|ref|ZP_01064360.1| putative permease [Vibrio sp. MED222]
 gi|85836238|gb|EAQ54369.1| putative permease [Vibrio sp. MED222]
          Length = 299

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ +   L++    +           + +    + +   RT   +    ++S+     
Sbjct: 64  IIVLAVCTSLVYAASRSWKLALGCVASLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LDIMQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ W + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L     ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + +   C     A   +W+     V          +      T+  + V  +++  
Sbjct: 60  STPWIIVLAVCTSLVYAASRSWKLALGCVASLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +       S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   ++    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280


>gi|78223107|ref|YP_384854.1| binding-protein dependent transport system inner membrane protein
           [Geobacter metallireducens GS-15]
 gi|78194362|gb|ABB32129.1| Binding-protein-dependent transport systems inner membrane
           component [Geobacter metallireducens GS-15]
          Length = 252

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R     ++A +  +P+G+ +G +P     + P  QLL       +FPL V     
Sbjct: 58  GVSLARFGSAYLLALVTAVPLGLLLGRQPLARCAVDPLIQLLRPISPIAWFPLAVLWFGI 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N     ++     + IL + I+     P  + +VA++F       +  +++P  F
Sbjct: 118 G----NAPAVFIIFLSVFFPILVSTISAVVKVPVIYLKVAANFGTRPLPTFLRVVVPAAF 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G  W   +  E+          +GLG  I ++        ++ G+L++ 
Sbjct: 174 PGIMVGLHIGVGTGWIHLVAGEMLG------AQSGLGFMIIDARNFLRTDWILAGMLVVG 227

Query: 564 CFVLALNRFL 573
              L +NR +
Sbjct: 228 LLGLLINRVM 237



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 101/251 (40%), Gaps = 16/251 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  ++R+ P +    AF+ +  ++       ++   P D+V  +        L  +   +
Sbjct: 3   PKSAQRVLP-LVSAAAFIAMWQVVARFYP-PEQFPAPTDVVKALVELSADGVLWGHIGVS 60

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R  SA +++L+       L  +       + P++ +++ I  + +    V++F     
Sbjct: 61  LARFGSAYLLALVTAVPLGLLLGRQPLARCAVDPLIQLLRPISPIAWFPLAVLWFGIG-- 118

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    A+F IF S  + +  S   ++  +P    +V+ +F       F  + VP +
Sbjct: 119 ------NAPAVFIIFLSVFFPILVSTISAVVKVPVIYLKVAANFGTRPLPTFLRVVVPAA 172

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG++  + + +  GW  +VA EM+          G+G  I  A        IL  ML +
Sbjct: 173 FPGIMVGLHIGVGTGWIHLVAGEMLG------AQSGLGFMIIDARNFLRTDWILAGMLVV 226

Query: 249 LGVIFLYDQLL 259
             +  L ++++
Sbjct: 227 GLLGLLINRVM 237


>gi|301159375|emb|CBW18893.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|323131166|gb|ADX18596.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 354

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   IAWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|302553443|ref|ZP_07305785.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471061|gb|EFL34154.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 292

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++   ++A+++ +  G+ +         + P  +++   PA    P+ +       
Sbjct: 61  SLTRILSGFLLAAVLGVATGVLVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFP--- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + +L +      A    ++E   +     WR    ++LPG  P 
Sbjct: 118 -SNEQGIVFITCTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRWRILGSVVLPGALPG 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +      +P V +G++ +   
Sbjct: 177 VFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVDYPGVFVGMVTIGVL 230

Query: 566 VLALN---RFLWHPLYLYGTR 583
               +     L   L  +  R
Sbjct: 231 GWLTSTAVELLGRRLTRWLPR 251



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 90/250 (36%), Gaps = 17/250 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L     +     D+       L         + +  R+LS  +++ +       L A+SR
Sbjct: 28  LWLRFSQFPTVTDVARAFAARLSGPDYWTDLTDSLTRILSGFLLAAVLGVATGVLVARSR 87

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +L P+L++++ IP +  +   ++ F           E   +F   T+  + +  S 
Sbjct: 88  LAEDLLGPVLEVIRPIPAIALVPVAILLF--------PSNEQGIVFITCTAAFFPVLVST 139

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +    EE  R+     W+    + +P ++PG+   + + +   W  V+++EMI 
Sbjct: 140 RHAVRALTPVWEEAVRTMGGGRWRILGSVVLPGALPGVFGGLSVGIGVSWICVISAEMIS 199

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271
                    G+G          D   +   M+T+  + +L      LL R +  W  +  
Sbjct: 200 G------QYGVGYRTWQDYTVVDYPGVFVGMVTIGVLGWLTSTAVELLGRRLTRWLPRTA 253

Query: 272 LERTTGIYPA 281
                     
Sbjct: 254 YVPGARPPRP 263


>gi|296103049|ref|YP_003613195.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057508|gb|ADF62246.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 263

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 82/239 (34%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           R +         ++  +A    W S   + +     +  + +           I+ +R V
Sbjct: 11  RAAPWFLPVGIVLIWQLASSTGWLSNRILPSPEGVIEAFWSLSASGELWQHLAISSWRAV 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   I + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  +  ++LPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFINVLLPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 102/257 (39%), Gaps = 18/257 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  VL+  + +            P  +++          L Q+ + ++ R +   
Sbjct: 14  PWFLPVGIVLIWQLASSTGWLSNRILPSPEGVIEAFWSLSASGELWQHLAISSWRAVIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I          ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG+  F  + +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFINVLLPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKF 270
              Q L R  + W+  +
Sbjct: 240 VSAQWLERSWLRWNPAY 256


>gi|315291003|gb|EFU50368.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 327

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 74  LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 133

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 134 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 190

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 191 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 245

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 246 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 296



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 73  LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 132

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 133 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 188

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 189 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 248

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 249 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 296


>gi|123444121|ref|YP_001008091.1| taurine transporter subunit [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091082|emb|CAL13965.1| putative taurine transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 267

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A  + +P GI +G    +   + P  ++    P   + PL+V     
Sbjct: 73  AASLGRILIALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGI 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       I    +AG  +        A +   + W+   ++ILP   
Sbjct: 133 GETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSAL 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 189 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 242

Query: 564 CFVLALN---RFLWHPLYLY 580
                +    R +   L  +
Sbjct: 243 IIAFGMELSLRAIQRRLTPW 262



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 104/242 (42%), Gaps = 17/242 (7%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
            +G+I+ L     +  + + +V   P      +L Q+ + +  R+L A++ ++       
Sbjct: 35  ALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTG 94

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
                S  +  VL P+++I + +P L +L   V++F           E + I  I+ +  
Sbjct: 95  IAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLAIF 146

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +T +    + ++ +     +R+   S WQ  W++ +P ++P ++  + + +  GW  +
Sbjct: 147 APITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTL 206

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMI 264
           VA+E+I          G+G  +  A +      ++  +  +  + F   L  + + R + 
Sbjct: 207 VAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLT 260

Query: 265 VW 266
            W
Sbjct: 261 PW 262


>gi|21226143|ref|NP_632065.1| glycine betaine transporter, permease [Methanosarcina mazei Go1]
 gi|20904368|gb|AAM29737.1| Glycine betaine transporter, permease protein [Methanosarcina mazei
           Go1]
          Length = 276

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           ++   +I  L +   +  +   +   V + L +   L   +  T   ++S+  ++L+   
Sbjct: 51  LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               LAAKS     VL PILD+MQ++P   +L   +++F     G V G     +FA+  
Sbjct: 111 PLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFFGL---GNVPGMIATLVFAMP- 166

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +PR+L+EV+ +F  + WQK   + +P ++P ++  +   +    
Sbjct: 167 ----PTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSL 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + MI          G+G  +   I+  D+     A L ++ +  + D++
Sbjct: 223 SMVVIAAMI-------GARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 269



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 80/230 (34%), Gaps = 14/230 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHF---TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +  ++  +A     +++   V  F      + L +  L   T+  V+    +A +I I
Sbjct: 51  LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI         + ++P   L+   P+ V+    +      ++   +   +        
Sbjct: 111 PLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFFGLGNVPGMIATLVF----AMP 166

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P + KEVA +F  T W+    + LP   P  + G       + +  +
Sbjct: 167 PTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSLSMVV 226

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +    ++          L +    + L+R 
Sbjct: 227 IAAMIG-------ARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 269


>gi|237729637|ref|ZP_04560118.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2]
 gi|226908243|gb|EEH94161.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2]
          Length = 354

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 63  PLDSWV------TEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPV-------- 108

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F         +G+   ++  ++           +    IT+  V+  ++   +
Sbjct: 109 ---AIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAM----ITLALVLTALLFCVV 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|138896247|ref|YP_001126700.1| putative aliphatic sulfonates ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267760|gb|ABO67955.1| Putative transport system permease protein of aliphatic sulfonates
           ABC transporter [Geobacillus thermodenitrificans NG80-2]
          Length = 261

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 100/258 (38%), Gaps = 19/258 (7%)

Query: 19  IFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            + L   +LV   G +       +    P D+V      L+   L Q+ S +  R L   
Sbjct: 16  PWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGF 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I     FV   L    R    +L   + ++++IP L  +   +++F           E 
Sbjct: 76  AIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWFGIG--------EE 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A +F +    ++ +  +    + N+   L E+ R + L  WQ FW + +P ++  ++  +
Sbjct: 128 AKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPGALSSILVGL 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      +++++L       L D
Sbjct: 188 RYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLAD 241

Query: 257 ---QLLFRPMIVWSNKFR 271
              + L +  + W+  ++
Sbjct: 242 SIARFLEKRWLRWNVNYQ 259



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 21/262 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIW 381
              ++    + V + L I       G A+   W S   +              +   +  
Sbjct: 4   SKKVKWIHEKVVPWGLPIVLLVAWQG-AVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQ 62

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+  R ++   I   +   +G+  G        +    Q++   P     PLV+   
Sbjct: 63  HLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWF 122

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + I  N + G         E+   + +  W+ +  I LPG
Sbjct: 123 GIG----EEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPG 178

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  +         G+G     + E      VV  +L+
Sbjct: 179 ALSSILVGLRYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILL 232

Query: 562 MCCFVLALN---RFLWHPLYLY 580
              F    +   RFL      +
Sbjct: 233 YALFGKLADSIARFLEKRWLRW 254


>gi|306846035|ref|ZP_07478601.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306273524|gb|EFM55375.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 295

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + Q A RT   +    V+S++       L A+S RL  ++ PILD+MQ++P   +L   V
Sbjct: 96  MWQDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       G+V G     I+AI       +       +  + +D+ E + +F  S  QK 
Sbjct: 156 MLLG---IGRVPGLIAVVIYAIP-----PIIRLTNLGIRLVDKDVLEAADAFGSSNIQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 89/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               + I      F     + ++     L            Q      ++ +L I W   
Sbjct: 16  RMLKQTIDEGFRTFTRGYGDAIENFFSPLQKFLLISERFMTQTPWPIILAIILAIAWVAS 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +  A  ++  I     +QD +        T+  + V  +++ II +P+GI +   
Sbjct: 76  RSVRVVLSALITLFLIGYFDMWQDAMR-------TISMIFVCTVLSIIIGLPIGILMARS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +    +   + + +  I      I+     G
Sbjct: 129 ERLQRIINPILDVMQTMPSFVYLIPVVMLLGIGRVPGLIAVVIYAI----PPIIRLTNLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 185 IRLVDKDVLEAADAFGSSNIQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|222086242|ref|YP_002544774.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723690|gb|ACM26846.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 278

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 96/268 (35%), Gaps = 17/268 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            P     R  P +   +         ++     +    P  +V     T     LP    
Sbjct: 24  RPVISLERFLPFLLPAVVIAAWQLGSSVGWISTRIMPSPAAVVLAFWQTTISGQLPHNIL 83

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R  + +++     F+       SR    +    L ++++IP L  +   +++F   
Sbjct: 84  VSAGRAFAGLLVGGSIGFLLGIANGVSRLSEKLTDTTLQMLRTIPHLAMVPLVILWFGIG 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E + +F      ++ +  + Y  + N+ R L E+ R + +S W  F  +  P
Sbjct: 144 --------EESKLFLTALGVLFPIYLNTYHGVRNVDRGLIEMGRVYGMSNWTLFKKVIFP 195

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  +  ++   W  ++ +E I          GIG     A +      ++  ++
Sbjct: 196 GALPSILVGLRFALGIMWLTLIVAESIAASS------GIGYMANNAREFGMTDVVVLTLV 249

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKFR 271
               +  L D   + L R  + W+  ++
Sbjct: 250 IYAVLGKLADVVARALERRALRWNPAYQ 277



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 17/262 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-------YIV 368
             R     R    +    + S +R    L          +   + W S          ++
Sbjct: 8   FVRVTAQSRARPAKQARPVISLERFLPFLLPAVVIAAWQLGSSVGWISTRIMPSPAAVVL 67

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
             +       +     ++  R    +++   I   +GI  G             Q+L   
Sbjct: 68  AFWQTTISGQLPHNILVSAGRAFAGLLVGGSIGFLLGIANGVSRLSEKLTDTTLQMLRTI 127

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PLV+        +       L   G  + I  N   G         E+   + +
Sbjct: 128 PHLAMVPLVILWFGIGEESK----LFLTALGVLFPIYLNTYHGVRNVDRGLIEMGRVYGM 183

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W  ++ +I PG  P  + G   A G  W   IV+E  +       ++G+G     + E
Sbjct: 184 SNWTLFKKVIFPGALPSILVGLRFALGIMWLTLIVAESIA------ASSGIGYMANNARE 237

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
            G    VVL ++I        +
Sbjct: 238 FGMTDVVVLTLVIYAVLGKLAD 259


>gi|298290867|ref|YP_003692806.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927378|gb|ADH88187.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 284

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 22/231 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQ------------DVLYVIWLGCITMFRVVVLII 395
           WF     + +      IGY+  +                    +     ++  R +V + 
Sbjct: 36  WFLPALLLVVWEVLSRIGYLAPNVLPAPSAVADAGWQVLKSGELFHHMAVSAARALVGLA 95

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +   I   +GI  G             Q++   P     PLV+                L
Sbjct: 96  LGGSIGFALGIANGLSDLTHRYSDTTLQMIRNIPHLALIPLVILWFGIE----EEAKLFL 151

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + I  N + G  +      E+  ++ ++ W  +R ++LPG  P    G   A G
Sbjct: 152 VALGVFFPIYINTLHGVRSVDPQLIEMGRAYGMSRWTLFRRVVLPGALPSIFVGLRFALG 211

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             W   IV+E  +        +GLG    ++ E      VVL ++I     
Sbjct: 212 IMWLTLIVAETIA------AESGLGHMAMQAREFLLVDIVVLAIVIYALLG 256



 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 98/272 (36%), Gaps = 23/272 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSL 61
           L+      I+    P        ++V  +++ + +        P  + D     L    L
Sbjct: 25  LFARFEARIAGWFLP-----ALLLVVWEVLSRIGYLAPNVLPAPSAVADAGWQVLKSGEL 79

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             + + +  R L  + +     F        S          L ++++IP L  +   ++
Sbjct: 80  FHHMAVSAARALVGLALGGSIGFALGIANGLSDLTHRYSDTTLQMIRNIPHLALIPLVIL 139

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F           E A +F +     + +  +    + ++   L E+ R++ +S W  F 
Sbjct: 140 WFGIE--------EEAKLFLVALGVFFPIYINTLHGVRSVDPQLIEMGRAYGMSRWTLFR 191

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +   +  ++   W  ++ +E I          G+G     A +   +  +
Sbjct: 192 RVVLPGALPSIFVGLRFALGIMWLTLIVAETIA------AESGLGHMAMQAREFLLVDIV 245

Query: 242 LYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
           + A++    +  + D   QLL R  + W   F
Sbjct: 246 VLAIVIYALLGKVADVATQLLERASLKWHPSF 277


>gi|167724288|ref|ZP_02407524.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei DM98]
          Length = 256

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 64  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 124 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 180 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 233

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 234 AIALALEIGLRALQRRLTPW 253



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 53  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 112

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 113 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 164

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 165 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 218

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 219 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 253


>gi|152971536|ref|YP_001336645.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150956385|gb|ABR78415.1| glycine/betaine/proline transport protein (ABC superfamily,
           membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 355

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +++   +  +V  I +        A  T   +L+A++  +
Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + +I       F  +   +  +      +    P           
Sbjct: 64  PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    +    V+  ++   +
Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324


>gi|161615705|ref|YP_001589670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161365069|gb|ABX68837.1| hypothetical protein SPAB_03490 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 354

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 100/303 (33%), Gaps = 21/303 (6%)

Query: 272 LERTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
           L       P    +L  F KT      ++        +      + +   +  I   F +
Sbjct: 40  LNSAPAPTPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQ 99

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             L + +   +     I W     G+ I      I            +       IT+  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAI--------GAIGAWSQAMITLAL 151

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++   +I +P+GIW+   P  +  ++P    +   PA V+   +V          N
Sbjct: 152 VLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----N 207

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G
Sbjct: 208 VPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAG 267

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A +  +++ + + G       GLG  +     +       +G + +    + L
Sbjct: 268 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIIL 320

Query: 570 NRF 572
           +R 
Sbjct: 321 DRL 323


>gi|330501438|ref|YP_004378307.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328915724|gb|AEB56555.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 292

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 104/244 (42%), Gaps = 22/244 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P  + L+A  + +G+  I +     T V   ++ +           +    T     S
Sbjct: 46  MLPPAWLLIAIFVGLGLWRIGVRFAIFTAVAFVLIVMT-------GFWEQTVVTLGLTFS 98

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           + +ISLL        AA+S R+  ++ PILD MQ++P   +L    + F     G+V G 
Sbjct: 99  STLISLLLGIPLGIWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLFGL---GRVPGI 155

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFA+  +            +  + +++ E  +SF  +  Q  + + +P +MP ++ 
Sbjct: 156 IATVIFAMPPA-----VRLTSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMA 210

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++      V+ + M+  G       G+G+ +  +I+  D+     + + ++ +  +
Sbjct: 211 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAII 263

Query: 255 YDQL 258
            D++
Sbjct: 264 LDRI 267



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  + +G+    IG     FT    + ++  G      +T+       +I+ ++ IP+G
Sbjct: 52  LLIAIFVGLGLWRIGVRFAIFTAVAFVLIVMTGFWEQTVVTLGLTFSSTLISLLLGIPLG 111

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW      +++ I+P    +   PA V+            +   +   +  +        
Sbjct: 112 IWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLFGLGRVPGIIATVIFAMPPAVRL-- 169

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E   SF  T  +    + LP   P  + G       A +  I++ 
Sbjct: 170 --TSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMAGVNQTIMMALSMVIIAS 227

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  +  S ++          + +    + L+R 
Sbjct: 228 MVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAIILDRI 267


>gi|239932917|ref|ZP_04689870.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291441267|ref|ZP_06580657.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291344162|gb|EFE71118.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 308

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 98/256 (38%), Gaps = 11/256 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           +SR++ P +  +   + V  ++         +   P D+   V       +L  Y   + 
Sbjct: 51  LSRKVLPPVTAVALVLAVWQLLVWAEVAPDYKLPAPSDVWGEVTDAWRQGTLLDYVWTSV 110

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L   +++L        L A+ + +   + P+L  +QS+P + ++   V++       
Sbjct: 111 SRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPVLSGLQSLPSVAWVPPAVLWLGLNNSM 170

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                 L A+ ++           +   +  IP       R+   +G +   Y+ +P ++
Sbjct: 171 MYAVILLGAVPSVAN--------GLVAGIDQIPPLFLRAGRTLGATGLRGARYVVMPAAL 222

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG +  +    +  W  ++A+E+I     +    G+G  +        +  +  A+  +L
Sbjct: 223 PGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASIAQVFLAIFLIL 280

Query: 250 GVIFLYDQLLFRPMIV 265
            V    D L+F P+  
Sbjct: 281 LVGIAIDLLIFSPLER 296



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 87/237 (36%), Gaps = 12/237 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWI 402
             V   +                 + +V      G +      ++ R ++  ++A  I  
Sbjct: 66  LAVWQLLVWAEVAPDYKLPAPSDVWGEVTDAWRQGTLLDYVWTSVSRGLLGFLMALAIGT 125

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +     + + + P    L + P+  + P  V  +       N  +  +++ G   
Sbjct: 126 PLGLLVARVKFVRAAVGPVLSGLQSLPSVAWVPPAVLWLGL----NNSMMYAVILLGAVP 181

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++AG    P  F     +   TG R  RY+++P   P Y+ G       +W + +
Sbjct: 182 SVANGLVAGIDQIPPLFLRAGRTLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLM 241

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
            +E+ +         GLG  +       S  +V L + ++    +A++  ++ PL  
Sbjct: 242 AAEIIASSPDLGV--GLGQLLENGRNNASIAQVFLAIFLILLVGIAIDLLIFSPLER 296


>gi|170748909|ref|YP_001755169.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170655431|gb|ACB24486.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 283

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T + +  A V++LL         A SR    V  P+LD+MQ++P   +L   +
Sbjct: 87  LWQSTVETLVLVSLATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLPSFVYLIPAL 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F            ++A FA     V  +       + N+P +L E S +F  S  QK 
Sbjct: 147 PFFGLG--------AVSACFATIIFSVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  +  +M      VV + MI  G       G+G  +  +I+  +  A
Sbjct: 199 LKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGREVWQSIQRLEAGA 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A L ++ +  + D+ 
Sbjct: 252 GFEAGLGIVILAVILDRF 269



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 86/256 (33%), Gaps = 15/256 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVL 377
           G          +    +   + ++ +  + V+   A+    +  + +G +          
Sbjct: 25  GAWLTRAVSRSVSNGIDTLTAALISVPPWAVIAVAALATYKVGGRKVGLLTLAGLLFLWD 84

Query: 378 YVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +W   + T+  V +  ++A +I IPVGIW            P   ++   P+ V+   
Sbjct: 85  LRLWQSTVETLVLVSLATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLPSFVYLIP 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       ++      +     +   ++     G    P +  E + +F  +  +    
Sbjct: 145 ALPFFGLGAVSACFATIIF----SVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKLLK 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G       A +  +++ +   G       GLG  + +S ++       
Sbjct: 201 VQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGREVWQSIQRLEAGAGF 253

Query: 557 LGVLIMCCFVLALNRF 572
              L +    + L+RF
Sbjct: 254 EAGLGIVILAVILDRF 269


>gi|167743261|ref|ZP_02416035.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
          Length = 254

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 62  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 122 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 178 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 231

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 232 AIALALEIGLRALQRRLTPW 251



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 51  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 110

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 111 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 162

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 163 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 216

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 217 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 251


>gi|329940251|ref|ZP_08289533.1| transport system integral membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329301077|gb|EGG44973.1| transport system integral membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 307

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 10/232 (4%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +   P  + D V        L  Y   +  R L   + +L        L A+ + +   
Sbjct: 80  SKLPSPSAVWDEVHEAWLRGDLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAA 139

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + PIL  +QS+P + ++   V++                   I    V ++   +   + 
Sbjct: 140 IGPILSGLQSLPSVAWVPPAVIWLGLDNSMMYA--------VILLGAVPSIANGLVSGVD 191

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P       R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I      
Sbjct: 192 QVPPLFLRAGRTMGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFP 249

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
               G+G  +       D+  +  A+L +L V    D L+F P+  W  + R
Sbjct: 250 DLGVGLGQLLENGRNASDMSMVFEAILLILVVGIAIDLLIFSPLERWVLRSR 301



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++  + A  I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 99  GDLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 158

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  F     +   TG +   +
Sbjct: 159 AVIWLGL----DNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGTWH 214

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 215 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMSMVF 272

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 273 EAILLILVVGIAIDLLIFSPLERWVLR 299


>gi|238797256|ref|ZP_04640757.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
 gi|238718893|gb|EEQ10708.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC
           43969]
          Length = 255

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A  + +P GI +G  P + + + P  ++    P   + PL+V     
Sbjct: 61  AASLGRILIALFAAVALGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +    +AG  +        A +   + W+  R+++LP   
Sbjct: 121 GETSK----ILLIYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 177 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 230

Query: 564 CFVLALN---RFLWHPLYLY 580
                +    R +   L  +
Sbjct: 231 IIAFGMELSLRAIQRRLTPW 250



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 103/248 (41%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V  + +I+ L     +  + +  V   P      +L Q+ + +  R+L A+  ++ 
Sbjct: 17  LWWAVTALQLISPLFLPAPQQVLHQLWVIASPQGFMDATLWQHLAASLGRILIALFAAVA 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S R+  VL P+++I + +P L +L   V++F           E + I  
Sbjct: 77  LGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T +    + ++ +     +R+   S WQ   ++ +P ++P ++  + + + 
Sbjct: 129 IYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPEILTGIRIGLG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
            GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   L  + 
Sbjct: 189 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 242

Query: 259 LFRPMIVW 266
           + R +  W
Sbjct: 243 IQRRLTPW 250


>gi|167850265|ref|ZP_02475773.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei B7210]
          Length = 252

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 60  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 120 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 176 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 229

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 230 AIALALEIGLRALQRRLTPW 249



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 49  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 108

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 109 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 160

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 161 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 214

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 215 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 249


>gi|209520159|ref|ZP_03268932.1| choline ABC transporter, permease protein [Burkholderia sp. H160]
 gi|209499423|gb|EDZ99505.1| choline ABC transporter, permease protein [Burkholderia sp. H160]
          Length = 300

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ VISL+         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++  ++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + ++
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 14/228 (6%)

Query: 348 WFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           W  +   V IG+    W+   + +                IT+   +   +I+ ++ +P+
Sbjct: 50  WALMAFFVGIGLWRVGWRFALFTLAALLLIYGTGFWDQMVITLGLTLSSTVISLVLGVPL 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW+     +   ++P   L+   PA V+            +   L   +  +       
Sbjct: 110 GIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G     ++  E   +F  T W+    +  P   P  +TG       A +  I++
Sbjct: 169 ---TALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALSMVIIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +  S ++          + +    + L+R 
Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGMSVVMLAIILDRI 266


>gi|223934499|ref|ZP_03626420.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
 gi|223896962|gb|EEF63402.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
          Length = 348

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 19/211 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +V+  +++S++ +P+GI  G     +   +PF +     PA  F  L V+ +    
Sbjct: 127 SIRTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCVAVLGI-- 184

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E A +   +GW+  R II+P     
Sbjct: 185 --DDPPKVAIIVIGTFFQQVLIIANTVRKVDPALLEAAQTLGASGWKLVRRIIIPAAITD 242

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T      G AW   IV+EV          +G+  +I +     +F  V   + ++   
Sbjct: 243 IYTDMRILLGWAWTYLIVAEVVG------TMSGITYFINQQARYRNFDNVYAAIGMIGII 296

Query: 566 VLALNRFL---------WHPLYLYGTRCLRL 587
             + +  L         W        R   L
Sbjct: 297 GFSTDLVLAWLGTILFPWKRKTRTAARRFAL 327



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +    +   ++   ++S L       L    R    +  P ++  + +P   F    V
Sbjct: 120 LHESLGHSIRTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCV 179

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                  P K        +  I     +     +  ++  +   L E +++   SGW+  
Sbjct: 180 AVLGIDDPPK--------VAIIVIGTFFQQVLIIANTVRKVDPALLEAAQTLGASGWKLV 231

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++  +  +M + +   W +++ +E++        + GI  +I    + ++   
Sbjct: 232 RRIIIPAAITDIYTDMRILLGWAWTYLIVAEVVG------TMSGITYFINQQARYRNFDN 285

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +  A+  +  + F  D +L
Sbjct: 286 VYAAIGMIGIIGFSTDLVL 304


>gi|187733136|ref|YP_001879072.1| taurine transporter subunit [Shigella boydii CDC 3083-94]
 gi|187430128|gb|ACD09402.1| taurine uptake ABC transporter, permease protein [Shigella boydii
           CDC 3083-94]
 gi|320174742|gb|EFW49872.1| Taurine transport system permease protein TauC [Shigella
           dysenteriae CDC 74-1112]
          Length = 275

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 102/249 (40%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +  L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|148254013|ref|YP_001238598.1| putative taurine ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146406186|gb|ABQ34692.1| Putative taurine ABC transporter, permease protein [Bradyrhizobium
           sp. BTAi1]
          Length = 282

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 106/250 (42%), Gaps = 17/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L +++    I   L       V   ++ +     +  +L Q+   +  R+++A++ +++ 
Sbjct: 46  LWWLVAAAQIVPPLFLPSPLAVLGKLISVSADGFEGATLIQHTLASLARIVAALLAAIVV 105

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +     A S R   ++ P+L+  + IP L +L   +++F           E A +  I
Sbjct: 106 GTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLVIIWFGIG--------EFAKVLVI 157

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +   + ++  +    L ++  D    +RS   S WQ    + +P ++P ++  + + +  
Sbjct: 158 YLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVLLPHALPSILTGIRIGLGT 217

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
           GW  +VA+E++          G+G  I  A        ++  +L +  + F  +   +++
Sbjct: 218 GWATLVAAELVA------ATRGLGFMIKGASDFLVTDVVVLGILVIAVIAFALELALRVV 271

Query: 260 FRPMIVWSNK 269
            R ++ W  +
Sbjct: 272 QRVLVPWQGR 281



 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 10/196 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +I     ++ R+V  ++ A ++    G+ I   P     I+P  +     P   + 
Sbjct: 80  EGATLIQHTLASLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYL 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+               L++  G    I+   + G  +   D    A S   + W+  
Sbjct: 140 PLVIIWFGIG----EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVI 195

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  +TG     G  W   + +E+ +       T GLG  I  +++      
Sbjct: 196 GLVLLPHALPSILTGIRIGLGTGWATLVAAELVA------ATRGLGFMIKGASDFLVTDV 249

Query: 555 VVLGVLIMCCFVLALN 570
           VVLG+L++     AL 
Sbjct: 250 VVLGILVIAVIAFALE 265


>gi|294632482|ref|ZP_06711042.1| taurine transport system permease TauC [Streptomyces sp. e14]
 gi|292835815|gb|EFF94164.1| taurine transport system permease TauC [Streptomyces sp. e14]
          Length = 284

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 92/270 (34%), Gaps = 25/270 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--- 377
           G +    P   L       + +   + +      +A    W           +   +   
Sbjct: 13  GKVPVPRPRRALSRARRVALPFGSLLLFLAGWQLLAASGTWSQTLVPPPAKVWDAFVDVS 72

Query: 378 ------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                       Y++    I++ R+     I     +  G+ +G    + S  +P+   L
Sbjct: 73  TTHDGVRGYNGTYLVEHLGISLRRIAFGAGIGIAAGVVFGLLMGTVGWLRSLFEPWITFL 132

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   +F L++  +             L+       +  +     +A P+   E A +
Sbjct: 133 RTLPPLAYFSLLIIWLGI----NEEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARA 188

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              + W   + +I+P   P  +TG   A G A+++ + +E+ +         G+G  + +
Sbjct: 189 LGGSRWDVVKDVIVPSALPETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVKD 242

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +    + P V++G++ +    L ++  L  
Sbjct: 243 AANYNNTPVVLVGIIAIGVSGLVIDGLLLR 272



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 24/260 (9%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----------L 61
           +RR+      LL F+    ++       Q    P   V    + +              L
Sbjct: 27  ARRVALPFGSLLLFLAGWQLLAASGTWSQTLVPPPAKVWDAFVDVSTTHDGVRGYNGTYL 86

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   +  R+     I +    V+  L      L  +  P +  ++++P L + +  ++
Sbjct: 87  VEHLGISLRRIAFGAGIGIAAGVVFGLLMGTVGWLRSLFEPWITFLRTLPPLAYFSLLII 146

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E   I  +  +    +  S   ++  +P  L E +R+   S W    
Sbjct: 147 WLGIN--------EEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGGSRWDVVK 198

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP ++P  +  + +++   +  +VA+E++        LPGIG  +  A    +   +
Sbjct: 199 DVIVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPVV 252

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           L  ++ +     + D LL R
Sbjct: 253 LVGIIAIGVSGLVIDGLLLR 272


>gi|110640632|ref|YP_668360.1| taurine transporter subunit [Escherichia coli 536]
 gi|170683056|ref|YP_001742499.1| taurine transporter subunit [Escherichia coli SMS-3-5]
 gi|191173479|ref|ZP_03035006.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215485455|ref|YP_002327886.1| taurine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|300936349|ref|ZP_07151277.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300997448|ref|ZP_07181788.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|312964620|ref|ZP_07778871.1| taurine transport system permease protein tauC [Escherichia coli
           2362-75]
 gi|331645540|ref|ZP_08346644.1| taurine transport system permease protein TauC [Escherichia coli
           M605]
 gi|331671925|ref|ZP_08372721.1| taurine transport system permease protein TauC [Escherichia coli
           TA280]
 gi|331681761|ref|ZP_08382394.1| taurine transport system permease protein TauC [Escherichia coli
           H299]
 gi|110342224|gb|ABG68461.1| taurine transport system permease protein TauC [Escherichia coli
           536]
 gi|170520774|gb|ACB18952.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|190906188|gb|EDV65800.1| taurine uptake ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215263527|emb|CAS07855.1| taurine transporter subunit TauC, membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|281177541|dbj|BAI53871.1| taurine ABC transporter permease component [Escherichia coli SE15]
 gi|300304267|gb|EFJ58787.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300458455|gb|EFK21948.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|312290641|gb|EFR18519.1| taurine transport system permease protein tauC [Escherichia coli
           2362-75]
 gi|324010127|gb|EGB79346.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324010718|gb|EGB79937.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|330910161|gb|EGH38671.1| taurine transport system permease protein TauC [Escherichia coli
           AA86]
 gi|331045702|gb|EGI17828.1| taurine transport system permease protein TauC [Escherichia coli
           M605]
 gi|331070914|gb|EGI42273.1| taurine transport system permease protein TauC [Escherichia coli
           TA280]
 gi|331080963|gb|EGI52128.1| taurine transport system permease protein TauC [Escherichia coli
           H299]
          Length = 275

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R+L A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRILLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|116696181|ref|YP_841757.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530680|emb|CAJ97027.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 281

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 20/244 (8%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            QL S+ R    L  F         +  AWQ +              ++     +++RV 
Sbjct: 42  WQLASSHRAHLGLVTFANVPAPSDVVPAAWQLL----------QSPKLVLHLSNSLYRVF 91

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
                A++  I +G+ IG    +   + P  ++L   P   + PL +       L+    
Sbjct: 92  AGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELS---- 147

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  +   G  + IL N I G           A S     W  +  ++LP   P  VTG  
Sbjct: 148 MIFITFIGALFPILLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPSIVTGLA 207

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G +W   + +E+ +  +      G+G Y  E+    ++ ++V+G+L++  F +  + 
Sbjct: 208 IGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSA 261

Query: 572 FLWH 575
            +  
Sbjct: 262 LIKR 265



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 15/224 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+V      L    L  + S +  R+ +    + +   V      +SR L  +L+P
Sbjct: 61  PAPSDVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLP 120

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L++++ IP + ++   ++ F          +EL+ IF  F   ++ +  +    +    
Sbjct: 121 PLEVLRPIPGVAWIPLAILMF--------PSSELSMIFITFIGALFPILLNTIHGVERTD 172

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   +RS     W  F  + +P ++P +V  + + M   WF +V +EMI         
Sbjct: 173 PRLVATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAG------Q 226

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            GIG Y   A   Q+   I+  ML +         L+ + +  W
Sbjct: 227 YGIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSALI-KRLGAW 269


>gi|294084957|ref|YP_003551717.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664532|gb|ADE39633.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 296

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +    T   +  A +I + F      L A+S R   ++ PILDIMQ+IP   +L   
Sbjct: 95  GMWEDTMATLAIISVATLICIGFGIPLGILMARSNRAQSIITPILDIMQTIPSFVYLIPV 154

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GKV G     I+AI       +       +  + +++ E + +F  +  Q+
Sbjct: 155 VMLLG---IGKVPGMIAVCIYAIP-----PIVRLTNLGIRLVDKEVLEAADAFGANYKQR 206

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P +   +  ++      VV + MI V        G+G  +  A+  Q L 
Sbjct: 207 LFGVQIPLALPNIFAGVNQTIMMALAMVVIASMIGV-------KGLGVPVLQAVANQYLA 259

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L   L ++ +  ++D++
Sbjct: 260 LGLMNGLAIVALAIIFDRV 278



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 29/278 (10%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F R  G S  +FF PL   +    + L V  +        +     ++++    W   + 
Sbjct: 29  FSRNYGESLESFFDPLLQFMIWFEKLLIVTPWPI-----IIGIIAGLAWLGSRSWKLALG 83

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +          +I+  F   +          T+  + V  +I     IP+GI +     
Sbjct: 84  SIIAF-------FIIGRFGMWED------TMATLAIISVATLICIGFGIPLGILMARSNR 130

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             S I P   ++   P+ V+   VV  +    +   +     +       I+     G  
Sbjct: 131 AQSIITPILDIMQTIPSFVYLIPVVMLLGIGKVPGMIA----VCIYAIPPIVRLTNLGIR 186

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  E A +F     +    + +P   P    G       A    +++ +       
Sbjct: 187 LVDKEVLEAADAFGANYKQRLFGVQIPLALPNIFAGVNQTIMMALAMVVIASMIG----- 241

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
               GLG  + ++         ++  L +    +  +R
Sbjct: 242 --VKGLGVPVLQAVANQYLALGLMNGLAIVALAIIFDR 277


>gi|225181346|ref|ZP_03734790.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167927|gb|EEG76734.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 280

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T + +L A  ISL+         A+S R+   + P+LD+MQ++P   +L   
Sbjct: 83  GLWPDLLITFVLVLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPAFVYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F            + AI A F   V          +  +P +L E + SF  +  QK
Sbjct: 143 VMFFRVG--------SVPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATPRQK 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +   +       V + M+  G       G+G  +   I+  D+ 
Sbjct: 195 LIKVQLPLALPTIMAGVNQCIMLALSMAVIAAMVGAG-------GLGRVVWSGIQTLDVG 247

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D++
Sbjct: 248 LGFEGGLAVVILAIILDRI 266



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 11/202 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F   + L +     IT   V+V   I+ +I IP+GI       I+S + P   L+   PA
Sbjct: 76  FLLIENLGLWPDLLITFVLVLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPA 135

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+    V          ++   +     +    +     G    P +  E A SF  T 
Sbjct: 136 FVYLIPAVMFFRVG----SVPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATP 191

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P  + G       A + ++++ +   G       GLG  +    +  
Sbjct: 192 RQKLIKVQLPLALPTIMAGVNQCIMLALSMAVIAAMVGAG-------GLGRVVWSGIQTL 244

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
                  G L +    + L+R 
Sbjct: 245 DVGLGFEGGLAVVILAIILDRI 266


>gi|163801350|ref|ZP_02195249.1| putative permease [Vibrio sp. AND4]
 gi|159174839|gb|EDP59639.1| putative permease [Vibrio sp. AND4]
          Length = 299

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 97/231 (41%), Gaps = 15/231 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++G+   L++    +        +  I +    + +   RT   +    +++++     
Sbjct: 65  IILGVCTALVYAASRSWKLAVACFLSLILIGYFGMWEDTMRTLSIITVCTMLAIVLGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + +F  S  Q+   + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDKEVLEAATAFGASAKQRLVGVQLPLAMPTIMAGINQTIMMALSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + I   C     A   +W+                +      T+  + V  ++A +
Sbjct: 60  STPWMIILGVCTALVYAASRSWKLAVACFLSLILIGYFGMWEDTMRTLSIITVCTMLAIV 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASAKQRLVGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|149913631|ref|ZP_01902164.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149812751|gb|EDM72580.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 656

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 83/526 (15%), Positives = 164/526 (31%), Gaps = 52/526 (9%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   T   ++ A  +S+L   V  T+A +S    MVL P+L++ QS+P   ++   VV
Sbjct: 143 WEWTMETLSVIIVAAPLSILLGLVLGTMAWRSAGFRMVLNPLLNVAQSLPHFAYMIPVVV 202

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +         +G +  AI  I  S V  M       L  +P ++ E       + WQ   
Sbjct: 203 FIG-------VGPKAGAIVTIIFS-VPPMIRMTLLGLQKVPPEVIEAGHMAGATRWQLLR 254

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P +   ++  +   +      VV +  I +      L          ++   +   
Sbjct: 255 HVRLPTARTEILVGVNQVIMQCLAMVVLASFIGMPGLGQKL-------LQLLQALKIGRS 307

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV---LYLFRKTNFLRFI 298
           +   +T++ +  + D+        W+ +    +   I    SW+     L      +   
Sbjct: 308 IEIGITIVLLAVMLDRCS----KAWATR----QPEHIEKGTSWLIRHRVLLVWAVLVGVF 359

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW---------- 348
              S  F        +        +        + L    +      I W          
Sbjct: 360 WGLSLIFPVLHEIGRRDAFSLADPLDAMMDWVIMVLDPVTQWLRWFLIVWVLIPLRDAML 419

Query: 349 ---FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASII 400
              F  V    + + W   G             +   G      IT++ V   + +A++I
Sbjct: 420 WLPFSAVLVFLMAVGWAVGGRRSALICLAYFGLIAMTGWWDRAMITVYTVTFAVFLATLI 479

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             P+GIW       +  +      L  FP+ ++   V+       +     + L      
Sbjct: 480 GFPLGIWGSRTESRARAVLLICDTLQTFPSFIYLIPVIMLFGVNDVAVVGAVVLFAAVPL 539

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             Y     I G    P    E A+    +  +    + LP   P  + G   +   +   
Sbjct: 540 IRY----TIEGLRNVPVAQIEAANMSGASRRQTLWSVRLPLALPTIMVGVNQSVMFSLFM 595

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            I++       +             S++ G    + L V  M   V
Sbjct: 596 VIIAAFIGTQDLGQE----MQRALSSSDVGKGLVLGLAVAFMGLMV 637



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 59/198 (29%), Gaps = 4/198 (2%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           + +    +       +              W+   +    F +  V+        T+  +
Sbjct: 94  YGKNRWPRLGPIPWSVIAITAAMVGYYLSGWRLAMFAGLTFVWVAVMGQWEWTMETLSVI 153

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V   ++ ++ + +G            + P   +  + P   +    +  V +  + P  
Sbjct: 154 IVAAPLSILLGLVLGTMAWRSAGFRMVLNPLLNVAQSLPHFAYM---IPVVVFIGVGPKA 210

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +IF +   ++   + G    P +  E       T W+  R++ LP      + G 
Sbjct: 211 GAIVTIIF-SVPPMIRMTLLGLQKVPPEVIEAGHMAGATRWQLLRHVRLPTARTEILVGV 269

Query: 511 ITACGGAWNASIVSEVAS 528
                      +++    
Sbjct: 270 NQVIMQCLAMVVLASFIG 287


>gi|304393421|ref|ZP_07375349.1| taurine ABC transporter, permease protein [Ahrensia sp. R2A130]
 gi|303294428|gb|EFL88800.1| taurine ABC transporter, permease protein [Ahrensia sp. R2A130]
          Length = 443

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+   +  +  IP+G  +G    +     P  + +   P     PLV+       
Sbjct: 252 SLIRVVIGFALGCLFGIPLGFAMGLNSWLRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 311

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     W +     AG S         A S   T  +    +ILP   P 
Sbjct: 312 QGK----ISLLFLAALWIMTIGARAGVSGVNISKVHAAYSLGATKPQILSKVILPNSLPE 367

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             T A  A G  W   + +E+ +
Sbjct: 368 IFTAARVAMGVCWGTVVAAELVA 390



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    + +R++    +  LF          +  L     PI++ M+ +P L  +   
Sbjct: 244 GLWENVMWSLIRVVIGFALGCLFGIPLGFAMGLNSWLRGWFDPIVEFMRPVPPLALIPLV 303

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT      +  +       + S   +  Q 
Sbjct: 304 IIWFGIGEQGK--------ISLLFLAALWIMTIGARAGVSGVNISKVHAAYSLGATKPQI 355

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
              + +P S+P +     ++M   W  VVA+E++  
Sbjct: 356 LSKVILPNSLPEIFTAARVAMGVCWGTVVAAELVAA 391


>gi|162451030|ref|YP_001613397.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
 gi|161161612|emb|CAN92917.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 307

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---------SIGYIVNHFTYQ 374
           R        +     R    L   +   +   A    WQ          +   +N     
Sbjct: 31  RGVPSPAPGRAPGEGRPRRDLRRAFLRALSVAACVGLWQWASMTRADLGVVTFLNVPAPT 90

Query: 375 DVLYVIWLGCIT----------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           DVL        +          +FRV+     A    + +G+ IG        + P  ++
Sbjct: 91  DVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLPPLEI 150

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P   + PL +       L+    +  +   G  + IL   I G  A        + 
Sbjct: 151 LRPIPGVAWLPLAILMFPSAELS----MIFITYMGALFPILIATIHGVGALDPRLIASSR 206

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S      R +  ++LPG  P  VTG     G +W   + +E+    +      G+G +  
Sbjct: 207 SLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMIGGQY------GIGYFTW 260

Query: 545 ESTEKGSFPEVV 556
           ES     +P++V
Sbjct: 261 ESYNLQRYPDIV 272



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D++           L Q+   +  R+L+    +     V   L  +SR     L+P
Sbjct: 87  PAPTDVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLP 146

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L+I++ IP + +L   ++ F          AEL+ IF  +   ++ +  +    +  + 
Sbjct: 147 PLEILRPIPGVAWLPLAILMF--------PSAELSMIFITYMGALFPILIATIHGVGALD 198

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   SRS      + F  + +P ++P +V  M + M   WF +V +EMI         
Sbjct: 199 PRLIASSRSLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMIGG------Q 252

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG +   +   Q    I+  ML +  +  L   L+ R
Sbjct: 253 YGIGYFTWESYNLQRYPDIVLGMLLIGLLGMLSSALVLR 291


>gi|254253737|ref|ZP_04947054.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124898382|gb|EAY70225.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 248

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++ RV V +  A ++ +P G  IG    +   + P  Q L       + P+ 
Sbjct: 48  QLVMHVATSVKRVAVGLAWALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIA 107

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +          +  L+ F   W +L N  AG +     + E+  S   T      +I
Sbjct: 108 VMSLGVGDR----AVYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHI 163

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +PGI  + +TG   A G  W   + +E+         + GLG  I ++ ++ ++ E+  
Sbjct: 164 YVPGIAAHVLTGVRLAIGVLWIVLVPAEMLG------VSAGLGYLILDTRDRLAYSELTA 217

Query: 558 GVLIMCCFVL 567
            +L++     
Sbjct: 218 VILVIGALGF 227



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            LLA + +  +   L            P+  +  +P  +    L  + + +  R+   + 
Sbjct: 6   GLLAVIALWWLAVTLAGTRNPMVAQFAPQRTLAALPALVAQDQLVMHVATSVKRVAVGLA 65

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            +L+          + R L  +L P +  ++ +  L ++   V+             + A
Sbjct: 66  WALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIAVMSLGVG--------DRA 117

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +  S VW +  +    +  + R   E+  S   +  +  W++ VP     ++  + 
Sbjct: 118 VYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHIYVPGIAAHVLTGVR 177

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           +++   W  +V +EM+ V        G+G  I           +   +L +  + F
Sbjct: 178 LAIGVLWIVLVPAEMLGVSA------GLGYLILDTRDRLAYSELTAVILVIGALGF 227


>gi|116051463|ref|YP_789704.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388040|ref|ZP_06877515.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313108800|ref|ZP_07794786.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa 39016]
 gi|115586684|gb|ABJ12699.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881288|gb|EFQ39882.1| putative aliphatic sulfonates transport permease protein
           [Pseudomonas aeruginosa 39016]
          Length = 262

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++ R+ P    L+   +    +       +    P  +++     L    + Q+ + + 
Sbjct: 6   RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R     +I      V   +   S+     L   + +++++P L  +   +++F      
Sbjct: 66  WRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +    ++ +  + Y  +  I   L E++RS+ LSG+  F  + +P ++
Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I          GIG     A +      ++ A+L   
Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231

Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273
            +  L D   + L R  + W   ++++
Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           +R++          V   A+   W S   +       +  + +           I+ +R 
Sbjct: 9   ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 69  AIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +L+        +
Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238


>gi|295699467|ref|YP_003607360.1| choline ABC transporter permease [Burkholderia sp. CCGE1002]
 gi|295438680|gb|ADG17849.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1002]
          Length = 300

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ VISL+         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++  ++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + ++
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 14/228 (6%)

Query: 348 WFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           W  +   V IG+    W+   + +                IT+   +   +I+ ++ +P+
Sbjct: 50  WALMAFFVGIGLWRVGWRFALFTLAALLLIYGTGFWDQMVITLGLTLSSTVISLVLGVPL 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW+     +   ++P   L+   PA V+            +   L   +  +       
Sbjct: 110 GIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G     ++  E   +F  T W+    +  P   P  +TG       A +  I++
Sbjct: 169 ---TALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALSMVIIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +  S ++          + +    + L+R 
Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGMSVVMLAIILDRI 266


>gi|269795239|ref|YP_003314694.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097424|gb|ACZ21860.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 293

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 12/260 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV--CGVAIGIAWQSIGYIVNHFTY 373
             R         P  + ++     +  ++   W  V     V                  
Sbjct: 32  APRGSARRPATGPGRWRRVAVGAILPLLVLAAWTWVTETGRVPAYRLPSPESVWSAAVDL 91

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     I+  RV++   I ++I + +G  +G        + P    L A P+  +
Sbjct: 92  AQRGLLGQYVAISTQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAW 151

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V  V     +      +L+  G  + +   V            E   ++ ++G R 
Sbjct: 152 VPLLVLWVGINEDSK----IILIAIGAFFPVYTTVAGALRHVDPHLVEAGRAYGLSGPRL 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP + P  + G   A   +W   + +E+ +       + GLG  + +S + G   
Sbjct: 208 LAQVQLPAVVPSVLAGLRLALAQSWLFLVAAELLN------SSMGLGFLLVDSGQNGRVD 261

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            ++L ++++       N  +
Sbjct: 262 RMILSIVLLALLGGLTNALV 281



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 103/252 (40%), Gaps = 23/252 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQ---------ETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  +A   ++ ++ +                   P  +            L QY + 
Sbjct: 44  PGRWRRVAVGAILPLLVLAAWTWVTETGRVPAYRLPSPESVWSAAVDLAQRGLLGQYVAI 103

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+L    I  +   +   +   S     +L P  D ++++P L ++   V++     
Sbjct: 104 STQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAWVPLLVLWVGINE 163

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+I   + A F ++T+        +  +L ++   L E  R++ LSG +    + +P 
Sbjct: 164 DSKIILIAIGAFFPVYTT--------VAGALRHVDPHLVEAGRAYGLSGPRLLAQVQLPA 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P ++  + ++++  W F+VA+E++          G+G  +  + +   +  ++ +++ 
Sbjct: 216 VVPSVLAGLRLALAQSWLFLVAAELL------NSSMGLGFLLVDSGQNGRVDRMILSIVL 269

Query: 248 MLGVIFLYDQLL 259
           +  +  L + L+
Sbjct: 270 LALLGGLTNALV 281


>gi|294632073|ref|ZP_06710633.1| ABC transporter, permease [Streptomyces sp. e14]
 gi|292835406|gb|EFF93755.1| ABC transporter, permease [Streptomyces sp. e14]
          Length = 302

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P D+           +L  Y   +  R L   + +L        L A+ + +   +
Sbjct: 76  KLPSPSDVGAEFKDAWLQGTLLDYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAI 135

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P+L  +QS+P + ++   V++                   I    V ++   +   +  
Sbjct: 136 GPVLSGLQSLPSVAWVPPAVIWLGLDNSMMYA--------VILLGAVPSIANGLVSGIDQ 187

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 188 VPPLYLRAGRTMGATGLKGAWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLG 247

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              G+G+ +        +  +  A++ +L V    D L+F P+  W  + R
Sbjct: 248 I--GLGALLENGRNASSMSMVFEAIILILFVGIAIDLLIFSPLERWVLRSR 296



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++  + A  I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 94  GTLLDYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPVLSGLQSLPSVAWVPP 153

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  +     +   TG +   +
Sbjct: 154 AVIWLGL----DNSMMYAVILLGAVPSIANGLVSGIDQVPPLYLRAGRTMGATGLKGAWH 209

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P Y+ G       +W + + +E+ +         GLGA +       S   V 
Sbjct: 210 IVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGALLENGRNASSMSMVF 267

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             ++++    +A++  ++ PL  +  R
Sbjct: 268 EAIILILFVGIAIDLLIFSPLERWVLR 294


>gi|319441416|ref|ZP_07990572.1| putative ABC transporter permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 311

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R VV   IA +  + +G+ IG+   ++  + P  ++L    A    P+V   +  
Sbjct: 121 GASLTRSVVGFGIAVVAGVTLGLLIGWYRFLADLLNPVLEILRNTAALALLPVVTLLLGI 180

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+++   + IL N + G           A S ++   + +  ++LP   
Sbjct: 181 GET----AKISLVVYAALFPILLNTLTGVRTVDPLLVRSARSLNLRPHQIFIRVVLPSAL 236

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG       +    + +E+          +GLG  I  S        + +G++ + 
Sbjct: 237 PSIFTGLRMGAAASILVLVAAEMIG------AKSGLGYLIQASQLNFQIANMYVGIIAIA 290

Query: 564 CFVLALNRFLW---HPLYLY 580
              L  N  L      L  +
Sbjct: 291 ALGLLANYGLLAVQRRLSKW 310



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            +++D         +L  +   +  R +    I+++       L    R L  +L P+L+
Sbjct: 101 SEVLDAAWRLTTDGTLGHHVGASLTRSVVGFGIAVVAGVTLGLLIGWYRFLADLLNPVLE 160

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I+++   L  L    +             E A I  +  + ++ +  +    +  +   L
Sbjct: 161 ILRNTAALALLPVVTLLLGIG--------ETAKISLVVYAALFPILLNTLTGVRTVDPLL 212

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +RS  L   Q F  + +P ++P +   + M  +     +VA+EMI          G+
Sbjct: 213 VRSARSLNLRPHQIFIRVVLPSALPSIFTGLRMGAAASILVLVAAEMIGAKS------GL 266

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
           G  I  +     +  +   ++ +  +  L +  L    R +  W
Sbjct: 267 GYLIQASQLNFQIANMYVGIIAIAALGLLANYGLLAVQRRLSKW 310


>gi|300786191|ref|YP_003766482.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299795705|gb|ADJ46080.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 280

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R      +A  + +P+G+ IG+   ++  +QP  +L     A    P+    +  
Sbjct: 85  LASVGRSAAGFAVAVAVAVPLGLLIGWYRPVARFLQPLLELARNTAALALLPVFTLLLGI 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+       L+++   W +L N IAG +       + A S  ++  R +R +ILP   
Sbjct: 145 GELSK----VSLVVYACVWPVLLNTIAGVNTVDPLLVKAARSLGLSSPRLFRKVILPSAV 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   +    + +E+           GLG  I  S       ++  G+L + 
Sbjct: 201 PTVFTGIRMAASYSILVLVAAEMVG------AKAGLGYLINTSQVNFQIQQMYAGILAVS 254

Query: 564 CFVLALN 570
              + +N
Sbjct: 255 VLGVLVN 261



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 78/214 (36%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R  +   +++        L    R +   L P+L++ ++   L  L  
Sbjct: 78  GELADHLLASVGRSAAGFAVAVAVAVPLGLLIGWYRPVARFLQPLLELARNTAALALLPV 137

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +             EL+ +  +  + VW +  +    +  +   L + +RS  LS  +
Sbjct: 138 FTLLLGIG--------ELSKVSLVVYACVWPVLLNTIAGVNTVDPLLVKAARSLGLSSPR 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P +   + M+ S     +VA+EM+          G+G  I  +     +
Sbjct: 190 LFRKVILPSAVPTVFTGIRMAASYSILVLVAAEMVGAKA------GLGYLINTSQVNFQI 243

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             +   +L +  +  L +     L R    W  K
Sbjct: 244 QQMYAGILAVSVLGVLVNSGFVALERRFSTWRPK 277


>gi|254513483|ref|ZP_05125548.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacteraceae bacterium KLH11]
 gi|221532487|gb|EEE35483.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacteraceae bacterium KLH11]
          Length = 324

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   ++SA+++S +       L  K+ R    + PILD MQ+IP   +L   V+   
Sbjct: 101 AMTTLAIVVSAVIMSFIIGLPLGILVGKNDRFESAIRPILDTMQTIPAFVYLVPVVMLIG 160

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G  +  IFA     +  +       +  +   + E +R+F  +  Q  + + 
Sbjct: 161 ---IGNVSGVVVTVIFA-----LPPLIRLTSLGIRGVNPSVVEAARAFGANPRQVLFKVE 212

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  ++      VV + MI V        G+G+ +  A+   D    L  
Sbjct: 213 LPLATPTILAGVNQTIMLSLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKALVG 265

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 266 GLGIVILAIVLDRI 279



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            L   T+  VV  +I++ II +P+GI +G      S I+P    +   PA V+   VV  
Sbjct: 99  GLAMTTLAIVVSAVIMSFIIGLPLGILVGKNDRFESAIRPILDTMQTIPAFVYLVPVVML 158

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   +++  +   +         ++     G         E A +F     +    + LP
Sbjct: 159 IGIGNVSGVVVTVIF----ALPPLIRLTSLGIRGVNPSVVEAARAFGANPRQVLFKVELP 214

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  + G       + +  +++ + S         GLG  +  +  +    + ++G L
Sbjct: 215 LATPTILAGVNQTIMLSLSMVVIASMIS-------VKGLGNEVLRAMGRLDAGKALVGGL 267

Query: 561 IMCCFVLALNRF 572
            +    + L+R 
Sbjct: 268 GIVILAIVLDRI 279


>gi|7542432|gb|AAF63444.1|AF218267_1 glycine betaine/L-proline transport system permease protein
           [Pseudomonas putida]
          Length = 315

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L +  +   +  T   +L+++    L       L A+S R+  ++ P+LD MQ++P   +
Sbjct: 87  LGLIGVWAESMTTLALVLTSVFFCALIGIPLGILCARSDRMERIIRPLLDAMQTLPAFVY 146

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+ F     G V G  +  +FA     +  +       +  +P D  E +R+F  +
Sbjct: 147 LVPVVMLFG---IGNVPGVLVTIVFA-----LPPLVRLTNLGIRQVPEDKIEAARAFGCT 198

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P +   ++  +  ++      VV + MI VG       G+G  +   I  
Sbjct: 199 PRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-------GLGQMVLRGIGR 251

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+       + ++ +    D+L
Sbjct: 252 LDMGLATVGGVGLVLLAIFLDRL 274



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F            + L+  V         IR+   +    +    +            +
Sbjct: 7   PFQAATIPLGDWVTATLNFLVHNFREVFRAIRWPIDQVLNGIEFTLQSIPPTIGIILSSL 66

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G  +     ++       T   ++ V      T+  V+  +   ++I IP+GI      
Sbjct: 67  LGWQLAGKRMAL-LCFVTLTLLGLIGVWAESMTTLALVLTSVFFCALIGIPLGILCARSD 125

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   I+P    +   PA V+   VV          N+   L+ I      ++     G 
Sbjct: 126 RMERIIRPLLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIVFALPPLVRLTNLGI 181

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A +F  T  +    + LP      + G       + +  +++ + S G  
Sbjct: 182 RQVPEDKIEAARAFGCTPRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-- 239

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 240 -----GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 274


>gi|226364422|ref|YP_002782204.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242911|dbj|BAH53259.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 295

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 14/257 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCIT 386
           P  +  L  +  +   L ++      G+   +       ++  F        +W     +
Sbjct: 47  PLAWRILKPSIAIVAFLALWEIAPRVGLVDEVFLPPFSTVIEAFFDLVQSGELWQHVSAS 106

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R ++   +A +I IP+GI I +   +S  + P  +L     A    P+ +  +     
Sbjct: 107 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIGEE 166

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       L+I+   + IL N I+G         + ASS  ++  R ++ ++LP   P  
Sbjct: 167 SK----IALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVPTI 222

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A   +    I +E+           GLG  I  S      P +  G++ +    
Sbjct: 223 FTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISVLG 276

Query: 567 LALN---RFLWHPLYLY 580
           L+LN     +   L  +
Sbjct: 277 LSLNAVLVLIERRLSRW 293



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASR 67
             ++ RI      ++AF+ +  I   +    +    P   V      L     L Q+ S 
Sbjct: 46  GPLAWRILKPSIAIVAFLALWEIAPRVGLVDEVFLPPFSTVIEAFFDLVQSGELWQHVSA 105

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R L    ++++         A  R +   L PIL++ ++   L  L   ++      
Sbjct: 106 SLSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIG- 164

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E + I  +  +  + +  +    +  +   L + + S  LS  + F  + +P 
Sbjct: 165 -------EESKIALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPA 217

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   + M+ +     ++A+EM+          G+G  I  +     +  +   ++ 
Sbjct: 218 AVPTIFTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQFNFQIPNMYAGIVA 271

Query: 248 MLGVIFLYD---QLLFRPMIVW 266
           +  +    +    L+ R +  W
Sbjct: 272 ISVLGLSLNAVLVLIERRLSRW 293


>gi|237510087|ref|ZP_04522802.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|235002292|gb|EEP51716.1| taurine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
          Length = 253

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 61  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 121 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 177 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 230

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 231 AIALALEIGLRALQRRLTPW 250



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 50  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 109

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 110 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 161

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 162 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 215

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 216 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 250


>gi|76817512|ref|YP_335779.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 1710b]
 gi|76581985|gb|ABA51459.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 1710b]
          Length = 253

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 61  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 121 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 177 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 230

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 231 AIALALEIGLRALQRRLTPW 250



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 50  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 109

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 110 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 161

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 162 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 215

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 216 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 250


>gi|187779097|ref|ZP_02995570.1| hypothetical protein CLOSPO_02692 [Clostridium sporogenes ATCC
           15579]
 gi|187772722|gb|EDU36524.1| hypothetical protein CLOSPO_02692 [Clostridium sporogenes ATCC
           15579]
          Length = 254

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I    I+  RV     I   + IP+GI  G    I    +     L   P     PL++
Sbjct: 51  LIKHIAISTLRVFEGFFITICLAIPLGILFGVNKSIYDYFKNLLGFLRHTPPLALVPLLI 110

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +      ++++  + + +L N I+G  +      EV  +F+++    ++ II
Sbjct: 111 LWFGIGEKSK----IIIIVLASFFPVLLNTISGVESCSKKLIEVGQTFNLSKINIFKKII 166

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G     G +W A I +E+ +       ++GLG  I +  +      V++G
Sbjct: 167 IPWALPNILVGMRLGIGYSWRAIIGAEMVA------ASSGLGYLILDGQQLSRSAVVIVG 220

Query: 559 VLIMCCFVLALN 570
           +L +       +
Sbjct: 221 ILSIGILGTVCD 232



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P++++  +   +   +L ++ + +TLR+     I++        L   ++ +     
Sbjct: 32  LPTPKEVIVSLGELIKSGALIKHIAISTLRVFEGFFITICLAIPLGILFGVNKSIYDYFK 91

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +L  ++  P L  +   +++F           E + I  I  +  + +  +    + + 
Sbjct: 92  NLLGFLRHTPPLALVPLLILWFGIG--------EKSKIIIIVLASFFPVLLNTISGVESC 143

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L EV ++F LS    F  + +P+++P ++  M + +   W  ++ +EM+        
Sbjct: 144 SKKLIEVGQTFNLSKINIFKKIIIPWALPNILVGMRLGIGYSWRAIIGAEMVAASS---- 199

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +      ++  +L++  +  + D + 
Sbjct: 200 --GLGYLILDGQQLSRSAVVIVGILSIGILGTVCDWVF 235


>gi|117164559|emb|CAJ88105.1| putative transport system integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 311

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 97/258 (37%), Gaps = 11/258 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASR 67
             +  ++ P I  +   +++  ++         +   P  + D V       +L  Y   
Sbjct: 52  ATLVHKVLPPISAIALVLVIWQLLVWAEIAPDYKLPSPSAVWDEVADAWRQGTLLDYIWT 111

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R L   +++L        L A+ + +   + PIL  +QS+P + ++   V++     
Sbjct: 112 SVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQSLPSVAWVPPAVLWLGLNN 171

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                         I    V ++   +   +  IP       R+   +G +  W++ +P 
Sbjct: 172 SMMYA--------VILLGAVPSIANGLVAGIDQIPPLFLRAGRTLGATGLRGAWHIVMPG 223

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PG +  +    +  W  ++A+E+I     +    G+G  +        +  +  A+  
Sbjct: 224 ALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASISQVFLAIFL 281

Query: 248 MLGVIFLYDQLLFRPMIV 265
           +L V    D L+F P+  
Sbjct: 282 ILLVGIAIDLLIFSPLER 299



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 14/261 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--YQDVLYVIWLGC 384
                L+     +V   +      +V    +  A  +  Y +   +  + +V      G 
Sbjct: 45  VDRPPLRATLVHKVLPPISAIALVLVIWQLLVWAEIAPDYKLPSPSAVWDEVADAWRQGT 104

Query: 385 I------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ R ++  ++A  I  P+G+ +     + + + P    L + P+  + P  V
Sbjct: 105 LLDYIWTSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQSLPSVAWVPPAV 164

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +       N  +  +++ G    I   ++AG    P  F     +   TG R   +I+
Sbjct: 165 LWLGL----NNSMMYAVILLGAVPSIANGLVAGIDQIPPLFLRAGRTLGATGLRGAWHIV 220

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +PG  P Y+ G       +W + + +E+ +         GLG  +       S  +V L 
Sbjct: 221 MPGALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASISQVFLA 278

Query: 559 VLIMCCFVLALNRFLWHPLYL 579
           + ++    +A++  ++ PL  
Sbjct: 279 IFLILLVGIAIDLLIFSPLER 299


>gi|257468126|ref|ZP_05632222.1| putative aliphatic sulfonate ABC transporter,permease protein
           [Fusobacterium ulcerans ATCC 49185]
          Length = 253

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 85/210 (40%), Gaps = 10/210 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +I    I++ R+ +   I   + +P+GI+ G   +I +  +   +     P     
Sbjct: 48  ENGKLIRHIGISLRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALI 107

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+++        +      ++++  + + +  NV+ G       + EV   F ++    +
Sbjct: 108 PMIILWFGIGETSK----IVIIVLASFFPVFLNVLKGVEGCDKKYIEVGKVFDMSQKDIF 163

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             IILP   P  + G     G +W A I +E+ +       ++G+G  I ++ +      
Sbjct: 164 LKIILPNSVPDILIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDI 217

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           V+LG++++    +  +      +  Y  R 
Sbjct: 218 VMLGIIVIGTLGIITDNIFSKAVSAYIKRK 247



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 96/267 (35%), Gaps = 15/267 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           + R     ++ +   ++V  + +   L        P  IV      ++   L ++   + 
Sbjct: 1   MKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGISL 60

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+     I++               +      I +  +  P L  +   +++F      
Sbjct: 61  RRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGETS 120

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K++   LA+ F +F         ++ + +    +   EV + F +S    F  + +P S+
Sbjct: 121 KIVIIVLASFFPVF--------LNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPNSV 172

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + + +   W  ++ +E+I          GIG  I  A +      ++  ++ + 
Sbjct: 173 PDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIVIG 226

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTT 276
            +  + D +  + +  +  + + +   
Sbjct: 227 TLGIITDNIFSKAVSAYIKRKQGDYVE 253


>gi|330013350|ref|ZP_08307621.1| glycine betaine/L-proline transport system permease protein ProW
           [Klebsiella sp. MS 92-3]
 gi|328533538|gb|EGF60261.1| glycine betaine/L-proline transport system permease protein ProW
           [Klebsiella sp. MS 92-3]
          Length = 355

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +++   +  +V  I +        A  T   +L+A++  +
Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + +I       F  +   +  +      +    P           
Sbjct: 64  PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    +    V+  ++   +
Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324


>gi|194432572|ref|ZP_03064858.1| taurine uptake ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|194419133|gb|EDX35216.1| taurine uptake ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|332085640|gb|EGI90804.1| taurine transport system permease protein tauC [Shigella
           dysenteriae 155-74]
          Length = 275

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPMFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAADV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ +     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPMFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLAADVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|298488069|ref|ZP_07006106.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157348|gb|EFH98431.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 285

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|53716257|ref|YP_106163.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           23344]
 gi|52422227|gb|AAU45797.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC
           23344]
          Length = 253

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 61  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 121 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 177 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 230

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 231 AIALALEIGLRALQRRLTPW 250



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 50  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 109

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 110 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 161

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 162 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 215

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 216 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 250


>gi|16766121|ref|NP_461736.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|167992531|ref|ZP_02573629.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168262082|ref|ZP_02684055.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168464070|ref|ZP_02697987.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197264631|ref|ZP_03164705.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198245962|ref|YP_002216786.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200386810|ref|ZP_03213422.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205353760|ref|YP_002227561.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858079|ref|YP_002244730.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|20141693|sp|P17327|PROW_SALTY RecName: Full=Glycine betaine/L-proline transport system permease
           protein proW
 gi|16421359|gb|AAL21695.1| glycine/betaine/proline transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|195633315|gb|EDX51729.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197242886|gb|EDY25506.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197940478|gb|ACH77811.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603908|gb|EDZ02453.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205273541|emb|CAR38527.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205329315|gb|EDZ16079.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205349121|gb|EDZ35752.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206709882|emb|CAR34235.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|261247951|emb|CBG25784.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267994926|gb|ACY89811.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|312913833|dbj|BAJ37807.1| glycine betaine ABC transporter permease protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223607|gb|EFX48672.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|326624544|gb|EGE30889.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628868|gb|EGE35211.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
 gi|332989687|gb|AEF08670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 354

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   IAWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|331012243|gb|EGH92299.1| sulfonate ABC transporter permease [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 285

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|242240062|ref|YP_002988243.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242132119|gb|ACS86421.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 282

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 23/271 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWL 382
           H P        + R+ + L + +F +  G+  G+    W  + ++ + FT      +++ 
Sbjct: 22  HHPLMVPLRPVSYRLRWTLGVGFFVLFFGIWGGVTLGGWVPVTFLADPFTMLREGVLLFT 81

Query: 383 -------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                    +T+ RVV   ++A++I +P+GI +G    + +  +PF       PA+ F P
Sbjct: 82  DYDFTQDIGMTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVP 141

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++       +       L++  G+ + I+  V         D  E A +   +      
Sbjct: 142 LLILWAGIGEMQK----VLVIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVL 197

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++PG  P          G AW   IV+E+         ++G+G  I +S    +  ++
Sbjct: 198 RVLIPGSAPDIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDSQALLNTGQI 251

Query: 556 VLGVLIMCCFVLALNRFLW---HPLYLYGTR 583
           + G++++    L  +         L+ +  R
Sbjct: 252 IFGIIVIGVIGLLSDMLFKALNRRLFAWSVR 282



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 22  LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F  + G + +     +     P  ++    +    +   Q    T +R+++  +++ 
Sbjct: 45  FVLFFGIWGGVTLGGWVPVTFLADPFTMLREGVLLFTDYDFTQDIGMTVMRVVAGFLLAA 104

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L    + +     P +   + +P   F+   +++            E+  + 
Sbjct: 105 LIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKVL 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  S+    RDL E + +   S       + +P S P +   + + +
Sbjct: 157 VIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVLRVLIPGSAPDIAELLRLVL 216

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  L D L  
Sbjct: 217 GWAWTYVIVAELIGASS------GIGHMIVDSQALLNTGQIIFGIIVIGVIGLLSDMLFK 270

Query: 259 -LFRPMIVWSNK 269
            L R +  WS +
Sbjct: 271 ALNRRLFAWSVR 282


>gi|170724130|ref|YP_001751818.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762133|gb|ACA75449.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 265

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 85/271 (31%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++          V  +A+   W S   +                  +  
Sbjct: 2   SRATSSTLTQRLAPWALPVLLLAVWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFLIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVARK 262



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 106/274 (38%), Gaps = 17/274 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
              +++R+ P    +L   +    ++      +    P  +V      +    +  + + 
Sbjct: 6   SSTLTQRLAPWALPVLLLAVWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAI 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R     +I      V   +   S     +L   + +++++P L  +   +++F    
Sbjct: 66  SGWRAGLGFLIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID- 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P 
Sbjct: 125 -------ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++   W  ++ +E I          GIG     A +      ++ A++ 
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVL 231

Query: 248 MLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
              +  L D   + L R  + W   +++ R  G 
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVARKEGA 265


>gi|221198282|ref|ZP_03571328.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221208221|ref|ZP_03581225.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221171869|gb|EEE04312.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221182214|gb|EEE14615.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 291

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 10/234 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +   + W   +  V               +       +      ++ RV+     A++  
Sbjct: 52  WQAAVHWRLSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASLTRVLAGFAAAAVAG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ IG    +   + P  ++L   PA  + PL +       L+    +  +   G  
Sbjct: 112 VGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N + GA A        A S    G+  +  +ILPG  P   TG     G AW   
Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCL 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +E+ +  +      G+G +   S    ++P++V+G+ ++    +  +  +  
Sbjct: 228 VTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+    + +          
Sbjct: 60  LSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASLTRVLAGFAAAAVAGVGLGLAIG 119

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 120 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +E
Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 232 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275


>gi|114770390|ref|ZP_01447928.1| taurine ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
 gi|114549227|gb|EAU52110.1| taurine ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
          Length = 462

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 4/143 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RVV+   +  +  IP+G  +G          P  + +   P     PL++       
Sbjct: 271 SLIRVVLGFALGCLFGIPLGFAMGLSNWFRGWFDPIVEFMRPVPPLALIPLIIIWFGIGE 330

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     W +     AG S         A S   T  +    +ILP   P 
Sbjct: 331 QGK----ISLLFLAALWIMTIAARAGVSGVNISKVHAAYSLGATKRQLLLKVILPNSLPE 386

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 387 IFTGARVAMGVCWGTVVAAELVA 409



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 8/156 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    + +R++    +  LF          S        PI++ M+ +P L  +   
Sbjct: 263 GLWENVFWSLIRVVLGFALGCLFGIPLGFAMGLSNWFRGWFDPIVEFMRPVPPLALIPLI 322

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F     GK        I  +F + +W MT +    +  +       + S   +  Q 
Sbjct: 323 IIWFGIGEQGK--------ISLLFLAALWIMTIAARAGVSGVNISKVHAAYSLGATKRQL 374

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
              + +P S+P +     ++M   W  VVA+E++  
Sbjct: 375 LLKVILPNSLPEIFTGARVAMGVCWGTVVAAELVAA 410


>gi|167552691|ref|ZP_02346443.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205322669|gb|EDZ10508.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 354

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   IAWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|331699700|ref|YP_004335939.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954389|gb|AEA28086.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 325

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 91/221 (41%), Gaps = 14/221 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P ++   +   L   +  Q    +  R+L    ++ +   V      +SR     +
Sbjct: 105 KLPTPGEVATALGAQLTSGTYYQDLLASVRRILLGFGLATVVGVVTGVAVGRSRVARAAI 164

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P++++ + IP +  +   ++ F          +E   +F  F +  + +  S   ++ +
Sbjct: 165 RPVIEVSRPIPAIALVPLAILLF--------PTSEQGIVFITFFAAFFPVAVSTIHAMKS 216

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P+  EE +R+          ++ +P +MPG+   + +SM   W  V+++EMI       
Sbjct: 217 LPKVWEEAARTMGARRVAVLTHIVLPGAMPGIFSGLSVSMGVAWICVISAEMISG----- 271

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG Y   A    D   ++  ML++  + F    ++ R
Sbjct: 272 -QFGIGYYTWQAYGLLDYAGVVVGMLSIGALGFGTAWVVER 311



 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++   +A+++ +  G+ +G      + I+P  ++    PA    PL +     
Sbjct: 130 LASVRRILLGFGLATVVGVVTGVAVGRSRVARAAIRPVIEVSRPIPAIALVPLAILLFP- 188

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  +  F   + +  + I    + P  ++E A +          +I+LPG  
Sbjct: 189 ---TSEQGIVFITFFAAFFPVAVSTIHAMKSLPKVWEEAARTMGARRVAVLTHIVLPGAM 245

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   +G   + G AW   I +E+ S         G+G Y  ++     +  VV+G+L + 
Sbjct: 246 PGIFSGLSVSMGVAWICVISAEMISG------QFGIGYYTWQAYGLLDYAGVVVGMLSIG 299

Query: 564 CFVLA 568
                
Sbjct: 300 ALGFG 304


>gi|261342126|ref|ZP_05969984.1| glycine betaine/L-proline transport system permease protein ProW
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315457|gb|EFC54395.1| glycine betaine/L-proline transport system permease protein ProW
           [Enterobacter cancerogenus ATCC 35316]
          Length = 356

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 158 FCVVIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 214

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 215 IIFA-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVN 269

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D+
Sbjct: 270 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDR 322

Query: 258 L 258
           L
Sbjct: 323 L 323



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 93/280 (33%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              R++        +      + +   +  I   F +  L + +   +     I W    
Sbjct: 63  PLDRWVTEGIDWVVTHFRPVFQGIRVPVDYILNGFQQMLLGMPAPVAIILFSLIAWQFGS 122

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+        I            +       IT+  V+  ++   +I +P+GIW+   P
Sbjct: 123 AGMGAATLISLIAI--------GAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSP 174

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  I+P    +   PA V+   +V          N+   ++ I      I+   I G 
Sbjct: 175 RAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIIRLTILGI 230

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P D  E + SF  +  +    + LP   P  + G       A +  +++ + + G  
Sbjct: 231 NQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-- 288

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 289 -----GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|162453045|ref|YP_001615412.1| ABC-type transporter, permease protein [Sorangium cellulosum 'So ce
           56']
 gi|161163627|emb|CAN94932.1| ABC-type transporter, permease protein [Sorangium cellulosum 'So ce
           56']
          Length = 277

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 91/266 (34%), Gaps = 25/266 (9%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-----VNHFTYQDVLYV 379
              PE   Q       +  +          +A+   W++   +            +VL  
Sbjct: 8   ISLPEESQQGQLVGDAARWIGRAIARSGILLAVAALWETAPRVGLVEGAFLPPLSEVLGT 67

Query: 380 IWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            W              ++ R +V   +A  + +P+G+ IG+   ++  + P  ++L    
Sbjct: 68  GWQLLQNGQLLSHIKASLSRSLVGFTLAISVGVPLGLAIGWYKGVADALNPLLEVLRNTA 127

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    P+ +  +     +       L+I+   W IL N I+G         + A +  ++
Sbjct: 128 ALALLPVFLLLLGIGESSK----IALVIYSCTWPILLNTISGVRGVDPLLVKSARTMGLS 183

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + +R +ILP   P    G   A   +    + +E+           GLG  I  +   
Sbjct: 184 PLQLFRKVILPAAVPTIFVGIRLAGAYSLLVLVAAEMIG------AKAGLGYLIIYAQYN 237

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
              P + +G+L +    L  N  L  
Sbjct: 238 FQIPSMYVGILTITALGLTFNHLLMR 263



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 83/216 (38%), Gaps = 14/216 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            +++      L    L  +   +  R L    +++             + +   L P+L+
Sbjct: 62  SEVLGTGWQLLQNGQLLSHIKASLSRSLVGFTLAISVGVPLGLAIGWYKGVADALNPLLE 121

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++++           +  + ++   +   E + I  +  S  W +  +    +  +   L
Sbjct: 122 VLRNT--------AALALLPVFLLLLGIGESSKIALVIYSCTWPILLNTISGVRGVDPLL 173

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +R+  LS  Q F  + +P ++P +   + ++ +     +VA+EMI          G+
Sbjct: 174 VKSARTMGLSPLQLFRKVILPAAVPTIFVGIRLAGAYSLLVLVAAEMIGAKA------GL 227

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G  I  A     + ++   +LT+  +   ++ LL R
Sbjct: 228 GYLIIYAQYNFQIPSMYVGILTITALGLTFNHLLMR 263


>gi|323494248|ref|ZP_08099360.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
 gi|323311411|gb|EGA64563.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
          Length = 299

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +   L++    +        +  I +    + +   RT   +    ++S++     
Sbjct: 65  IILAVCTGLVYAASRSWKLSVGCFVSLILIGYFGMWEDTMRTLSIITVCTMLSIVLGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  ++ P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIAMARSNRIQSIVTPMLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E S +F  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMALSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           VV + MI V        G+G  +  +I  Q     L     ++ +  L+D+
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 280



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + I   C     A   +W+                +      T+  + V  +++ +
Sbjct: 60  STPWMIILAVCTGLVYAASRSWKLSVGCFVSLILIGYFGMWEDTMRTLSIITVCTMLSIV 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     I S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRIQSIVTPMLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E +++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 280


>gi|323191477|gb|EFZ76739.1| taurine transport system permease protein tauC [Escherichia coli
           RN587/1]
          Length = 275

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAILLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 102/253 (40%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P+ ++  +     P      +L Q+ + +  R+L A++
Sbjct: 33  ILLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRILLALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           S  +  +L PI+++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|289644094|ref|ZP_06476190.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
 gi|289506094|gb|EFD27097.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
          Length = 288

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 85/267 (31%), Gaps = 16/267 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +         +   R  +     ++        +  +        +        +     
Sbjct: 13  TRLSASAGSPVAASRRSWLPRAGRIAGGISRRVVGILILLAAWETLPRLGVVDRVFLPPF 72

Query: 370 HFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
                + + ++  G        ++ R      IA  I +P+G+ IG+    +  + P  +
Sbjct: 73  SEVADEWVVLLRGGDLWEHTSASLTRAASGFAIAIAIALPLGLLIGWFRLAAQFLNPVLE 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +          P+ V        +       ++++   W +L N I+G         + A
Sbjct: 133 VFRNTAPLALLPVFVLIFGLGETSK----IAIIVYACVWPVLLNTISGVQGVDPLLVKSA 188

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S  +   R ++ +ILP   P   TG   A   A    + +E+           GLG  I
Sbjct: 189 RSMGLPSVRLFQKVILPAAVPTIFTGVRLAGAYAILILVAAELVG------AQAGLGYLI 242

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
             +    + PE+  G++ +    L +N
Sbjct: 243 NYAQSNFAIPEMYAGIITVSVVGLIIN 269



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 85/224 (37%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            ++ D   + L    L ++ S +  R  S   I++        L    R     L P+L+
Sbjct: 73  SEVADEWVVLLRGGDLWEHTSASLTRAASGFAIAIAIALPLGLLIGWFRLAAQFLNPVLE 132

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + ++   L  L   V+ F           E + I  I  + VW +  +    +  +   L
Sbjct: 133 VFRNTAPLALLPVFVLIFGLG--------ETSKIAIIVYACVWPVLLNTISGVQGVDPLL 184

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +RS  L   + F  + +P ++P +   + ++ +     +VA+E++          G+
Sbjct: 185 VKSARSMGLPSVRLFQKVILPAAVPTIFTGVRLAGAYAILILVAAELVG------AQAGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
           G  I  A     +  +   ++T+  V  + +Q L    R    W
Sbjct: 239 GYLINYAQSNFAIPEMYAGIITVSVVGLIINQGLLALERRFTRW 282


>gi|220923325|ref|YP_002498627.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947932|gb|ACL58324.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 283

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T + +  A V++L+         A SRR   +  P+LD+MQ++P   +L   +
Sbjct: 87  LWQSTVETLVLVTLATVVALVIGIPVGICCALSRRAWRLFSPLLDMMQTLPSFVYLIPAL 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F            ++A FA     V  +       +  +P +L E S +F  S  QK 
Sbjct: 147 PFFGLG--------AVSACFATIVFSVPPVIRLTALGIRGVPTELVEASDAFGGSAAQKL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  +M      VV + MI  G       G+G  +  +I+  +  A
Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGREVWQSIQRLEAGA 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
              A + ++ V  + D++
Sbjct: 252 GFEAGIGIVIVAVILDRV 269



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 82/226 (36%), Gaps = 16/226 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVG 405
           +  G+A  ++++  G  +   T   +L++    +W   + T+  V +  ++A +I IPVG
Sbjct: 54  ICIGIATLVSYRIGGRKIGVLTLAGLLFLWNLRLWQSTVETLVLVTLATVVALVIGIPVG 113

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I             P   ++   P+ V+    +       ++      +     +   ++
Sbjct: 114 ICCALSRRAWRLFSPLLDMMQTLPSFVYLIPALPFFGLGAVSACFATIVF----SVPPVI 169

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P +  E + +F  +  +    + LP   P  + G       A +  +++ 
Sbjct: 170 RLTALGIRGVPTELVEASDAFGGSAAQKLFKVQLPLALPTIMAGVNQTMMLALSMVVIAA 229

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +   G       GLG  + +S ++          + +    + L+R
Sbjct: 230 MIGAG-------GLGREVWQSIQRLEAGAGFEAGIGIVIVAVILDR 268


>gi|62181314|ref|YP_217731.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|168244607|ref|ZP_02669539.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168822875|ref|ZP_02834875.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194449937|ref|YP_002046773.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197247835|ref|YP_002147710.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204929493|ref|ZP_03220567.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|224584594|ref|YP_002638392.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238909581|ref|ZP_04653418.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|62128947|gb|AAX66650.1| ABC superfamily (membrane), glycine/betaine/proline transport
           protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194408241|gb|ACF68460.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|197211538|gb|ACH48935.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204321212|gb|EDZ06412.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205336554|gb|EDZ23318.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205340771|gb|EDZ27535.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|224469121|gb|ACN46951.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|320087216|emb|CBY96982.1| Glycine betaine/L-proline transport system permease protein proW
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|322614366|gb|EFY11297.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322621569|gb|EFY18422.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624430|gb|EFY21263.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626628|gb|EFY23433.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633512|gb|EFY30254.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322638445|gb|EFY35143.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322639748|gb|EFY36432.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322643794|gb|EFY40344.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649480|gb|EFY45914.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655930|gb|EFY52230.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661325|gb|EFY57550.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322662523|gb|EFY58731.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666897|gb|EFY63072.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671267|gb|EFY67390.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322677726|gb|EFY73789.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681447|gb|EFY77477.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322683846|gb|EFY79856.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715800|gb|EFZ07371.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323193765|gb|EFZ78968.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197447|gb|EFZ82584.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203262|gb|EFZ88291.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323205208|gb|EFZ90183.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323212779|gb|EFZ97590.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218079|gb|EGA02791.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221658|gb|EGA06071.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225126|gb|EGA09377.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230842|gb|EGA14960.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323234807|gb|EGA18893.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238846|gb|EGA22896.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323241546|gb|EGA25577.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248307|gb|EGA32243.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252927|gb|EGA36761.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323256951|gb|EGA40660.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323260574|gb|EGA44185.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264368|gb|EGA47874.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269502|gb|EGA52955.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 354

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   IAWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|331702032|ref|YP_004398991.1| ABC transporter integral membrane subunit [Lactobacillus buchneri
           NRRL B-30929]
 gi|329129375|gb|AEB73928.1| ABC-type transporter, integral membrane subunit [Lactobacillus
           buchneri NRRL B-30929]
          Length = 283

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSA 75
           +FD+L   L + I+    + +   T    ++    I L         +  ++T   +L++
Sbjct: 44  VFDILPIWLFMLIVLGATYWLNRNTKHWTLLIFEAIGLLYIWNQGFWRDMTQTLTLVLTS 103

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I+L+         AKS+   ++  PILD MQ++P   +L   V +F     G V G  
Sbjct: 104 SLIALVIGVPLGIWMAKSKVFAVINKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVI 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P DL E + S+  +GWQK + + +P +   L+  
Sbjct: 161 ASVIFAMP-----PTVRMTNLGIRQVPNDLIEAADSYGSTGWQKLFKVQLPLAKSTLMAG 215

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D      A L ++ +  + 
Sbjct: 216 VNQSMMLSLSMVVIASMI-------GAMGLGNKVYFAVGRNDAGGGFAAGLAIVILAIIL 268

Query: 256 DQL 258
           D++
Sbjct: 269 DRI 271



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           +L I+ F ++   A          W  + +      Y            T+  V+   +I
Sbjct: 47  ILPIWLFMLIVLGATYWLNRNTKHWTLLIFEAIGLLYIWNQGFWRDMTQTLTLVLTSSLI 106

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I +P+GIW+      +   +P    +   PA V+    V+      +   +   +  
Sbjct: 107 ALVIGVPLGIWMAKSKVFAVINKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIF- 165

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    PND  E A S+  TGW+    + LP      + G   +   
Sbjct: 166 ---AMPPTVRMTNLGIRQVPNDLIEAADSYGSTGWQKLFKVQLPLAKSTLMAGVNQSMML 222

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ +           GLG  +  +  +          L +    + L+R 
Sbjct: 223 SLSMVVIASMIG-------AMGLGNKVYFAVGRNDAGGGFAAGLAIVILAIILDRI 271


>gi|261340960|ref|ZP_05968818.1| taurine uptake ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316821|gb|EFC55759.1| taurine uptake ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 275

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 100/275 (36%), Gaps = 19/275 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF-----WFCVVCGVAIGIAWQSIGYIV 368
           +K  RT   +R+ F            V            W   +     G   + +  I 
Sbjct: 7   EKARRTRLALRWPFSRQLTLSLGTLLVLLAAWWAVAAQQWISPLFLPPPGQVLEKLITIA 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               + +      LG  ++ R++V ++ A +I +PVGI +G  P +   + P  +L    
Sbjct: 67  GPQGFMEATLWQHLGA-SLARILVALLAAVLIGVPVGIAMGLSPTVRGILDPLIELYRPV 125

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PL+V        +      LL+       +  + +AG  +        A S   
Sbjct: 126 PPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVALSALAGVKSAQQVRIRAAQSLGA 181

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +   ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E
Sbjct: 182 SRVQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMMQSAGE 235

Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
             +   V+ G+ ++      L    R L   L  +
Sbjct: 236 FLATDVVLAGIAVIAAIAFGLELGLRALQRRLTPW 270



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 89/218 (40%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+   +  R+L A++ ++L           S  +  +L P++++ + +P 
Sbjct: 68  PQGFMEATLWQHLGASLARILVALLAAVLIGVPVGIAMGLSPTVRGILDPLIELYRPVPP 127

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F           E + I  I+ +    +  S    + +  +     ++S 
Sbjct: 128 LAYLPLMVIWFGIG--------ETSKILLIYLAIFAPVALSALAGVKSAQQVRIRAAQSL 179

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q   ++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 180 GASRVQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMMQSA 233

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  +  +  + F  +   + L R +  W 
Sbjct: 234 GEFLATDVVLAGIAVIAAIAFGLELGLRALQRRLTPWH 271


>gi|330986610|gb|EGH84713.1| sulfonate ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 285

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|300986100|ref|ZP_07177716.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300407925|gb|EFJ91463.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
          Length = 324

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 71  LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 130

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 131 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 187

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 188 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 242

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 243 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 293



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
           +L      V   V   IAWQ  G  +   T   ++ +  +G  +     +  V+  ++  
Sbjct: 70  LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 129

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I
Sbjct: 130 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 185

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 186 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 245

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 246 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 293


>gi|261407642|ref|YP_003243883.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284105|gb|ACX66076.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 289

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 17/260 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------Y 373
             +R    +              L   +  +V   A  + W +   +             
Sbjct: 20  TRLRHKRIDRRFLFKLTHAWIGWLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVYL 79

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +I    I+ +R ++  ++   + +  GIW+GF       + P  Q+L   P    
Sbjct: 80  TSSGELIRHLGISSWRALLGFLLGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAI 139

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +    +   +      LL+  G+ + +  N   G  +  N   +VA     + W  
Sbjct: 140 APLFILWFGFGETSK----ILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDM 195

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +I+P   P+   G   + G AW   +V+E+         ++G+G  I ++       
Sbjct: 196 IRRLIVPASLPHIFLGIRLSIGVAWLGLVVAELMG------SSSGIGYIINDARSFSWTT 249

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V +G+L+        +  +
Sbjct: 250 VVFVGILVFALVGKLSDSLV 269



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 91/257 (35%), Gaps = 23/257 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSAMV 77
             V +  II     G      P  +   + I            L ++   ++ R L   +
Sbjct: 42  WLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVYLTSSGELIRHLGISSWRALLGFL 101

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +              S +   ++ P L +++++P L      +++F           E +
Sbjct: 102 LGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFG--------FGETS 153

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I     + +  + +  + ++   L +V+R  + S W     L VP S+P +   + 
Sbjct: 154 KILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIR 213

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+   W  +V +E++          GIG  I  A        +   +L    V  L D 
Sbjct: 214 LSIGVAWLGLVVAELMGSSS------GIGYIINDARSFSWTTVVFVGILVFALVGKLSDS 267

Query: 258 L---LFRPMIVWSNKFR 271
           L   L   ++ W + ++
Sbjct: 268 LVKGLEGRLLRWQDSYK 284


>gi|89097937|ref|ZP_01170824.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911]
 gi|89087439|gb|EAR66553.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911]
          Length = 253

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 18/251 (7%)

Query: 17  PNIFDLLAFVLVIGI----INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           P I  ++ F +VIG+      + L        P D+   +   +   +L    + +  R+
Sbjct: 3   PAIKRIIFFAMVIGLWELGSRMGLWLPTILPSPTDVFQSLVTGISDKTLLYDLAASFRRL 62

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  + ISL+       L AKS+     L  ++  +QS+P + +L   +++F         
Sbjct: 63  LIGLGISLVLGSALGILLAKSKTADETLGTVILALQSVPSIVWLPLAIMWFGLN------ 116

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E++ IF +     + MT +M   + N+       +++   SG   F  +  P S+P +
Sbjct: 117 --EVSVIFVVILGGTFVMTLNMRVGIKNVSPLFIRAAQTMGSSGIDLFTRVIFPASIPYV 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V    ++ +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ +  + 
Sbjct: 175 VTGARLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIAVMIIIGVIG 228

Query: 253 FLYDQLLFRPM 263
            + DQL+F+ +
Sbjct: 229 SIVDQLIFQRI 239



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 20/242 (8%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----------CITMFRVVVLII 395
           I +F +V G+    +   +       +  DV   +  G            +  R+++ + 
Sbjct: 8   IIFFAMVIGLWELGSRMGLWLPTILPSPTDVFQSLVTGISDKTLLYDLAASFRRLLIGLG 67

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ ++   +GI +         +      L + P+ V+ PL +       ++    +  +
Sbjct: 68  ISLVLGSALGILLAKSKTADETLGTVILALQSVPSIVWLPLAIMWFGLNEVS----VIFV 123

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I G  + +  N+  G       F   A +   +G   +  +I P   PY VTGA  A  
Sbjct: 124 VILGGTFVMTLNMRVGIKNVSPLFIRAAQTMGSSGIDLFTRVIFPASIPYVVTGARLAWA 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            AW A +  E+ S G       GLG  +  +++ G    V+  ++I+      +++ ++ 
Sbjct: 184 FAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIAVMIIIGVIGSIVDQLIFQ 237

Query: 576 PL 577
            +
Sbjct: 238 RI 239


>gi|325679909|ref|ZP_08159478.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324108347|gb|EGC02594.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 253

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +      +M+R     + +  + + +G+ +G  P +   + P  QLL       + 
Sbjct: 50  ENGKLFENISTSMYRFAAGYLTSVTVAVLLGLILGRLPKVFQYVNPALQLLRPISPTAWM 109

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P +V          ++   +++     + +L + +A        + +V+ +F I+     
Sbjct: 110 PFIVLLFGIG----DVPAVVIIFIAAFFPVLLSTVAAVGNIDPIYLKVSKNFGISQPALT 165

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +I P  FP    G   A G AW   +  E+          +GLG  I ++        
Sbjct: 166 WKVIFPAAFPQIANGIHLALGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADI 219

Query: 555 VVL 557
           ++ 
Sbjct: 220 LLA 222



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P+  +D +   ++   L +  S +  R  +  + S+    +   +  +  ++   + P
Sbjct: 36  PSPKMALDALVEMIENGKLFENISTSMYRFAAGYLTSVTVAVLLGLILGRLPKVFQYVNP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +++ I    ++ F V+ F           ++ A+  IF +  + +  S   ++ NI 
Sbjct: 96  ALQLLRPISPTAWMPFIVLLFGIG--------DVPAVVIIFIAAFFPVLLSTVAAVGNID 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +VS++F +S     W +  P + P +   + +++   W F+VA EM+         
Sbjct: 148 PIYLKVSKNFGISQPALTWKVIFPAAFPQIANGIHLALGTAWIFLVAGEMVG------AQ 201

Query: 223 PGIGSYIALAIKEQD 237
            G+G  I  A     
Sbjct: 202 SGLGYQIIDARNNIR 216


>gi|257462370|ref|ZP_05626784.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Fusobacterium sp. D12]
 gi|317060035|ref|ZP_07924520.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12]
 gi|313685711|gb|EFS22546.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12]
          Length = 329

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VL+I +  + +   ++      +V +  + +    L      T + +  + ++S+L   
Sbjct: 54  LVLIILLTGVAIFLWKKKWKYPLLVFLGLLFIYNQGLWSELMNTLVLVGMSSLLSILIGI 113

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L+AKS ++  +L PILD MQ++P   +L   V +F     G V G   + IF    
Sbjct: 114 PLGILSAKSDQVEGILKPILDFMQTMPSFVYLIPAVAFFG---IGIVPGVFASIIF---- 166

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +          +  IP +L EVS+SF  +  Q+   +  P +   ++  +  S+    
Sbjct: 167 -SLPPTVRMTNLGIRQIPEELIEVSKSFGTTKMQQLCGIEFPLAKNTILAGINQSIMLAL 225

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             VV + MI         PG+G  +  A++  ++         ++ +  + D+   R
Sbjct: 226 SMVVTASMI-------GAPGLGRGVLEALQRAEVGKGFVNGFALVILAIVIDRFTQR 275



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 74/235 (31%), Gaps = 11/235 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
             ++ I     V        W+    +     +     +      T+  V +  +++ +I
Sbjct: 52  PPLVLIILLTGVAIFLWKKKWKYPLLVFLGLLFIYNQGLWSELMNTLVLVGMSSLLSILI 111

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI       +   ++P    +   P+ V+    V+      +       +     +
Sbjct: 112 GIPLGILSAKSDQVEGILKPILDFMQTMPSFVYLIPAVAFFGIGIVPGVFASIIF----S 167

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               +     G    P +  EV+ SF  T  +    I  P      + G   +   A + 
Sbjct: 168 LPPTVRMTNLGIRQIPEELIEVSKSFGTTKMQQLCGIEFPLAKNTILAGINQSIMLALSM 227

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            + + +           GLG  + E+ ++    +  +    +    + ++RF   
Sbjct: 228 VVTASMIG-------APGLGRGVLEALQRAEVGKGFVNGFALVILAIVIDRFTQR 275


>gi|206580359|ref|YP_002236982.1| glycine betaine/L-proline ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288933940|ref|YP_003437999.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510982|ref|ZP_06550351.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp.
           1_1_55]
 gi|206569417|gb|ACI11193.1| glycine betaine/L-proline ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288888669|gb|ADC56987.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289775975|gb|EFD83974.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp.
           1_1_55]
          Length = 355

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +++   +  +V  I +        A  T   +L+A++  +
Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + +I       F  +   +  +      +    P           
Sbjct: 64  PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    +    V+  ++   +
Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324


>gi|134100967|ref|YP_001106628.1| taurine transport system permease protein TauC [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291003416|ref|ZP_06561389.1| taurine transport system permease protein TauC [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913590|emb|CAM03703.1| taurine transport system permease protein TauC [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 269

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 81/248 (32%), Gaps = 20/248 (8%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV----------LYVIWL 382
              S +R  + + +    V   +  G+ W      V      +V            ++  
Sbjct: 15  SAPSPRRRRFAVPLALNAVSILLGTGLWWALAALGVEIPAPPEVAGKAGEMIADGTLLKD 74

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV+    + + + I +G  +G+   + S  +P+ Q     P     PL +  + 
Sbjct: 75  TSASLARVLAGFALGTALAILLGFLMGWYGLVRSLTEPWVQFFRTIPPLAIIPLAIVLMG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  +    ++        + + + G           A          +R +++P  
Sbjct: 135 IG----EVPKIFVIFLAAFLACVISTLQGVVTVDRTLINAARVLGAGDATIFRRVVVPAS 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ + G     G AW   + +E+ +         GLG  +  +      P + + ++ +
Sbjct: 191 SPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVSLITI 244

Query: 563 CCFVLALN 570
               L ++
Sbjct: 245 GILGLVMD 252



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 90/249 (36%), Gaps = 14/249 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
            P   R   P   + ++ +L  G+   L     E   P ++       +   +L +  S 
Sbjct: 18  SPRRRRFAVPLALNAVSILLGTGLWWALAALGVEIPAPPEVAGKAGEMIADGTLLKDTSA 77

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L+   +      +   L      +  +  P +   ++IP L  +   +V      
Sbjct: 78  SLARVLAGFALGTALAILLGFLMGWYGLVRSLTEPWVQFFRTIPPLAIIPLAIVLMGIG- 136

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E+  IF IF +       S  Q +  + R L   +R         F  + VP 
Sbjct: 137 -------EVPKIFVIFLAAFLACVISTLQGVVTVDRTLINAARVLGAGDATIFRRVVVPA 189

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S P ++  M + +   W  +VA+E+I          G+G  +  A    DL  I  +++T
Sbjct: 190 SSPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVSLIT 243

Query: 248 MLGVIFLYD 256
           +  +  + D
Sbjct: 244 IGILGLVMD 252


>gi|289650725|ref|ZP_06482068.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 283

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTGVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           +L +  + ++  +  GIAW +   IV       +L+++    +      T+  ++V  II
Sbjct: 46  LLRMAPWWLMLIIVGGIAWHATRKIVTTGVIVGLLFLVGAVGLWDKLMQTLALMLVATII 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+GI       + S + P   ++   P+ V+   V+           +      
Sbjct: 106 AVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG----KVPAIFAT 161

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      ++     G      +  E  ++F    W+    + LP   P  + G       
Sbjct: 162 VIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMM 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 222 ALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270


>gi|238893295|ref|YP_002918029.1| taurine transporter subunit [Klebsiella pneumoniae NTUH-K2044]
 gi|238545611|dbj|BAH61962.1| taurine transport system permease component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 275

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  STLKWRWPLSRELTLSVATLAVLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WLVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 100/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 33  VLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGFMDATLWQHLAASLTRIVIALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           +  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     +RS   S  Q  W + +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|196250203|ref|ZP_03148897.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
 gi|196210387|gb|EDY05152.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
          Length = 261

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 19/258 (7%)

Query: 19  IFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            + L   +LV   G +       +    P D+V      L+   L Q+ S +  R L   
Sbjct: 16  PWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGF 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I     FV   L    R +  +L   + ++++IP L  +   +++F           E 
Sbjct: 76  AIGGSLGFVLGLLNGVFRPVERLLDTSIQMIRNIPHLAMIPLVILWFGIG--------EE 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A +F +    ++ +  +    + N+   L E+ R + L  WQ FW + +P ++  ++  +
Sbjct: 128 AKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPGALSSILVGL 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      +++++L       L D
Sbjct: 188 RYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLAD 241

Query: 257 ---QLLFRPMIVWSNKFR 271
              + L +  + W+  ++
Sbjct: 242 SIARFLEKRWLRWNVNYQ 259



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIW 381
              ++    + V + L I       G A+   W S   +              +   +  
Sbjct: 4   SKKVKWIHEKVVPWGLPIVLLVAWQG-AVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQ 62

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+  R ++   I   +   +G+  G    +   +    Q++   P     PLV+   
Sbjct: 63  HLSISFGRALIGFAIGGSLGFVLGLLNGVFRPVERLLDTSIQMIRNIPHLAMIPLVILWF 122

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + I  N + G         E+   + +  W+ +  I LPG
Sbjct: 123 GIG----EEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPG 178

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  +         G+G     + E      VV  +L+
Sbjct: 179 ALSSILVGLRYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILL 232

Query: 562 MCCFVLALN---RFLWHPLYLY 580
              F    +   RFL      +
Sbjct: 233 YALFGKLADSIARFLEKRWLRW 254


>gi|119961878|ref|YP_948787.1| ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948737|gb|ABM07648.1| ABC transporter, permease protein [Arthrobacter aurescens TC1]
          Length = 314

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 101/252 (40%), Gaps = 11/252 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+   +  L+  +L       L    ++    P D++           + +    +  R
Sbjct: 57  KRVLLPVAALVVLILAWQFYVSLEFKRRDLVPGPLDVLTQFVTMWGEGKVQEAVWTSLQR 116

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   +IS++       + A+   L     P++  +Q +P + ++   +++F        
Sbjct: 117 GVIGFLISVVIATPVGLILAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGL------ 170

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +    F +F   + ++   +   +  IP     V      +  Q    + +P ++PG
Sbjct: 171 --TDATVYFVVFMGAIPSIINGLISGVDQIPPQYRSVGTVLGANRLQMALQIVLPAALPG 228

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I VG T+    G+GS +       D+  ++ A+L +L V
Sbjct: 229 YIGGLKQGWAFSWRSLMAAEIIAVGGTIG--FGLGSLLDQGRLLSDMTIVMSAILLILFV 286

Query: 252 IFLYDQLLFRPM 263
             L + L+F P+
Sbjct: 287 GILIELLVFGPI 298



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 21/263 (7%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---------------SIGYIVNHFTYQ 374
           + LQ  S ++           V   V + +AWQ                +  +    T  
Sbjct: 42  DNLQSDSGRKAGIEWKRVLLPVAALVVLILAWQFYVSLEFKRRDLVPGPLDVLTQFVTMW 101

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               V      ++ R V+  +I+ +I  PVG+ +     +     P    L   P+  + 
Sbjct: 102 GEGKVQEAVWTSLQRGVIGFLISVVIATPVGLILAQVAPLRRAFGPLISGLQVLPSVAWV 161

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P  +             +  ++  G    I+  +I+G    P  ++ V +       +  
Sbjct: 162 PAAIIWFGLTDAT----VYFVVFMGAIPSIINGLISGVDQIPPQYRSVGTVLGANRLQMA 217

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I+LP   P Y+ G       +W + + +E+ + G       GLG+ + +         
Sbjct: 218 LQIVLPAALPGYIGGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSLLDQGRLLSDMTI 275

Query: 555 VVLGVLIMCCFVLALNRFLWHPL 577
           V+  +L++    + +   ++ P+
Sbjct: 276 VMSAILLILFVGILIELLVFGPI 298


>gi|257482713|ref|ZP_05636754.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 285

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|91786945|ref|YP_547897.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91696170|gb|ABE42999.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 282

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 25/282 (8%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +    L          +L        +    +     V  V     +   G++   F   
Sbjct: 9   QAPPHLPEAPVRQRSQWLAPLEPVGTNSRWLLGLGFFVLFVLAWAIFTLGGFVSPTFLAS 68

Query: 375 DV------------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            V            L  I    +T++RV    ++AS+I +P+GI +G    + +  +PF 
Sbjct: 69  PVTMAKEGWLLFTELNFIHDIGMTVWRVFGGFVLASLIAVPLGIAMGTYKGVEAFFEPFV 128

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                 PA+ F PL++               L++  G+ + I+  V         D  E 
Sbjct: 129 SFCRYLPASAFIPLLILWAGIGETQK----ILVIFIGSVFQIVLMVAVTVGGARRDLVEA 184

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +           +++PG  P          G AW   IV+E+         ++G+G  
Sbjct: 185 AYTLGAADRGIITRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHM 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
           I +S    +  +++ G++I+    L  +   + L   L+ + 
Sbjct: 239 ITDSQALLNTGQIIFGIIIIGLIGLVSDFAFKALNRRLFAWS 280



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + FVL   I  +           P  +     +     +       T  R+    V++ 
Sbjct: 45  FVLFVLAWAIFTLGGFVSPTFLASPVTMAKEGWLLFTELNFIHDIGMTVWRVFGGFVLAS 104

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L            + +     P +   + +P   F+   +++            E   I 
Sbjct: 105 LIAVPLGIAMGTYKGVEAFFEPFVSFCRYLPASAFIPLLILWAGIG--------ETQKIL 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +   +  ++    RDL E + +   +       + +P + PG+   + + +
Sbjct: 157 VIFIGSVFQIVLMVAVTVGGARRDLVEAAYTLGAADRGIITRVLIPGAAPGIAETLRLVL 216

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D    
Sbjct: 217 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDFAFK 270

Query: 258 LLFRPMIVWS 267
            L R +  WS
Sbjct: 271 ALNRRLFAWS 280


>gi|83593811|ref|YP_427563.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83576725|gb|ABC23276.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 357

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ II +L   I    +    +  + + + +      A  T   +L++++  +     
Sbjct: 91  PVMLAIIALLAWQIAGRKMAIGSLISMTL-IGLIGAWSEAMLTLSLVLTSVMFCIALGLP 149

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+S RL  +  P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 150 SGILMARSDRLAKLSRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 202

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E +RSF  S  Q    + +P ++P ++  +  ++     
Sbjct: 203 -LPPLIRLTNLGIRQVPEDLVEAARSFGASKTQLLTKVQLPLALPTIMAGINQTLMLALS 261

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  L D+L
Sbjct: 262 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVAIVLLAILIDRL 307



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F R +          L   V         IR+        L           +     +
Sbjct: 40  PFARPLIPLDDWTNQGLDWLVLSFRPLFQAIRWPIDAVLTALNGTLVGVPPPVMLAIIAL 99

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               I     +IG ++   T   ++       +T+  V+  ++    + +P GI +    
Sbjct: 100 LAWQIAGRKMAIGSLI-SMTLIGLIGAWSEAMLTLSLVLTSVMFCIALGLPSGILMARSD 158

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            ++   +P    +   PA V+   +V          N+   ++ I      ++     G 
Sbjct: 159 RLAKLSRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPLIRLTNLGI 214

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A SF  +  +    + LP   P  + G       A +  +++ + + G  
Sbjct: 215 RQVPEDLVEAARSFGASKTQLLTKVQLPLALPTIMAGINQTLMLALSMVVIASMIAVG-- 272

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + ++R 
Sbjct: 273 -----GLGQMVLRGIGRLDMGLATVGGVAIVLLAILIDRL 307


>gi|317484194|ref|ZP_07943123.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316924543|gb|EFV45700.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 278

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 20/256 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P     +  N+   + + +  F  +    + +     G    H   Q++  ++   
Sbjct: 14  RERRPLRLDDILMNRWFLHTVSVSLFLGLWYWTVYMGVFGRGLCYPHEVLQEIGNLMTRR 73

Query: 384 CI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                       +  RV +   IA  + IP+G ++G   + ++   P   L+   P   +
Sbjct: 74  LAGKGLWDHAWDSTRRVFIGFGIACALGIPLGFFMGINKYFNAFFNPIFNLIKPMPPISW 133

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L +  +             ++  G    I+ N   G      +  +V         + 
Sbjct: 134 VSLSILWLGIG----EEPKIFIIAIGAFVPIVLNAYNGIRLIDEELYDVVRMAGGGRMKE 189

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +  P   P    G   +  GAW+  + +E+ S        +GLG  I +    G   
Sbjct: 190 IVEVSFPAAVPSIFAGLQISLSGAWSCVLAAELVS------ARSGLGFVIVQGMNSGKAS 243

Query: 554 EVVLGVLIMCCFVLAL 569
            V+ G+L++       
Sbjct: 244 MVIAGMLLIALIASLC 259



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 81/208 (38%), Gaps = 14/208 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           +I +++   L    L  +A  +T R+     I+             ++       PI ++
Sbjct: 65  EIGNLMTRRLAGKGLWDHAWDSTRRVFIGFGIACALGIPLGFFMGINKYFNAFFNPIFNL 124

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ +P + +++ ++++            E   IF I       +  + Y  +  I  +L 
Sbjct: 125 IKPMPPISWVSLSILWLGIG--------EEPKIFIIAIGAFVPIVLNAYNGIRLIDEELY 176

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           +V R       ++   +  P ++P +   + +S+SG W  V+A+E++          G+G
Sbjct: 177 DVVRMAGGGRMKEIVEVSFPAAVPSIFAGLQISLSGAWSCVLAAELVS------ARSGLG 230

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFL 254
             I   +       ++  ML +  +  L
Sbjct: 231 FVIVQGMNSGKASMVIAGMLLIALIASL 258


>gi|188534247|ref|YP_001908044.1| Aliphatic sulfonates transport permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029289|emb|CAO97166.1| Aliphatic sulfonates transport permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 263

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 80/228 (35%), Gaps = 19/228 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V  +       +     I+ +R V+   I   I + +G+  G        +    Q+
Sbjct: 44  AIVVTFYKLSASGELWQHLAISSWRAVIGFSIGGSIGLVLGLITGVSKLGERLLDTSVQM 103

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+                L+  GT + I  N   G         E+A 
Sbjct: 104 LRNIPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLIEMAR 159

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S+ ++GW  +  ++LPG  P  + G   A G  W   IV+E  S       ++G+G    
Sbjct: 160 SYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWLTLIVAETIS------ASSGIGYLAM 213

Query: 545 ESTEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGTR 583
            + E      VV+ +++            L L R    WHP Y     
Sbjct: 214 NAREFLQTDVVVVAIILYALLGKLADVSALLLERVWLRWHPAYQLKEE 261



 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 104/269 (38%), Gaps = 18/269 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71
           R         +  V+   + +             + + +    L     L Q+ + ++ R
Sbjct: 9   RDFLLPWALPIVLVVGWQLASWAGWLSTRILPSPEAIVVTFYKLSASGELWQHLAISSWR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    I      V   +   S+    +L   + ++++IP L  +   +++F        
Sbjct: 69  AVIGFSIGGSIGLVLGLITGVSKLGERLLDTSVQMLRNIPHLALIPLVILWFGID----- 123

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A IF +    ++ +  + +  + NI R L E++RS+ LSGW  F  + +P ++P 
Sbjct: 124 ---ESAKIFLVALGTLFPIYINTWHGIRNIDRGLIEMARSYGLSGWSLFIQVVLPGALPS 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    +
Sbjct: 181 IMVGVRFALGLMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALL 234

Query: 252 IFLYD---QLLFRPMIVWSNKFRLERTTG 277
             L D    LL R  + W   ++L+  T 
Sbjct: 235 GKLADVSALLLERVWLRWHPAYQLKEETP 263


>gi|152968886|ref|YP_001333995.1| taurine transporter subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262042373|ref|ZP_06015535.1| taurine uptake ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330006842|ref|ZP_08305719.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953735|gb|ABR75765.1| taurine transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|259040281|gb|EEW41390.1| taurine uptake ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328535723|gb|EGF62167.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 275

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  STLKWRWPLSRQLTLSVATLAVLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WLVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580
           V+ G+ ++      L    R L   L  +
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 100/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 33  VLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGFMDATLWQHLAASLTRIVIALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           +  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     +RS   S  Q  W + +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|219851779|ref|YP_002466211.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
 gi|219546038|gb|ACL16488.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
          Length = 279

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 87/235 (37%), Gaps = 13/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  + +I     +   A    +  +   +   T      +     I++ R ++   +A +
Sbjct: 37  VIGLWEILPRAGIINAAFLPPFSVVLTTLIGMTLS--GEIFTHLFISLERSILGFGLAVL 94

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G+ +G+ P     + P  + L   P    +P+++  +    ++       ++ + 
Sbjct: 95  IAIPLGLALGWYPKFFRLLNPLIETLRNIPTLALYPVLILFLGIGEVSK----VAIIFYA 150

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAITACGGAW 518
             W +L N I+G  +      + A S  + +    ++ +I P   P   +G       A 
Sbjct: 151 ALWKVLINTISGVESVDPLLVKAARSVGVTSDLEIFKKVIFPSAVPQIASGMRLGATSAI 210

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + +E+          +GLG  +  S       ++   ++ +    LA N  L
Sbjct: 211 LVLVAAEMMG------AKSGLGFLVTNSQYNFEIEKMYAAIICLVILGLASNYLL 259



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 96/248 (38%), Gaps = 16/248 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRM 72
           R+  +   LL  + +  I+            P  +V    I + +   +  +   +  R 
Sbjct: 26  RLLSSGIALLIVIGLWEILPRAGIINAAFLPPFSVVLTTLIGMTLSGEIFTHLFISLERS 85

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +    +++L             +   +L P+++ +++IP L      +++          
Sbjct: 86  ILGFGLAVLIAIPLGLALGWYPKFFRLLNPLIETLRNIPTLALYPVLILFLGIG------ 139

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPG 191
             E++ +  IF + +W +  +    + ++   L + +RS  ++   + F  +  P ++P 
Sbjct: 140 --EVSKVAIIFYAALWKVLINTISGVESVDPLLVKAARSVGVTSDLEIFKKVIFPSAVPQ 197

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M +  +     +VA+EM+          G+G  +  +    ++  +  A++ ++ +
Sbjct: 198 IASGMRLGATSAILVLVAAEMMGAKS------GLGFLVTNSQYNFEIEKMYAAIICLVIL 251

Query: 252 IFLYDQLL 259
               + LL
Sbjct: 252 GLASNYLL 259


>gi|300309985|ref|YP_003774077.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300072770|gb|ADJ62169.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 278

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 84/231 (36%), Gaps = 15/231 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-----TYQDVLY 378
           R  +P +            +   F   V  G  + +    +    +       +      
Sbjct: 12  RRGWPHDDAYRPGRFTGWIVPLAFLLLVEAGARLELIPARLLPPPSELAHTLWSLAQRGE 71

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV    +I S + + +G+ +G      + ++P  Q L A P+  + PL++
Sbjct: 72  LLPHIAASLARVAAGFVIGSALAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLL 131

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +            +L+  G  + +  N++AG     +   EV ++  +       +I+
Sbjct: 132 LWLGI----DETPKVVLIAIGAFFPVYLNLVAGIRDIDHKLIEVGTTSGLNTQALIGHIL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           LP   PY   G       AW   + +E+ +       T G+G  +++  E 
Sbjct: 188 LPASLPYLFAGLRGGLSLAWMFLVAAELIA------ATKGVGYLLSDGRES 232



 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV     + L   +    P ++   +        L  + + +  R+ +  VI   
Sbjct: 33  LAFLLLVEAGARLELIPARLLPPPSELAHTLWSLAQRGELLPHIAASLARVAAGFVIGSA 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   SRR   +L P    +++IP L ++   +++       KV+   + A F 
Sbjct: 93  LAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVLIAIGAFFP 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         ++   + +I   L EV  +  L+      ++ +P S+P L   +   +S
Sbjct: 153 VY--------LNLVAGIRDIDHKLIEVGTTSGLNTQALIGHILLPASLPYLFAGLRGGLS 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W F+VA+E+I          G+G  ++   +      +L A+L +  +  L D LL
Sbjct: 205 LAWMFLVAAELIA------ATKGVGYLLSDGRESSRPDLVLAAILILALLGKLSDGLL 256


>gi|239928415|ref|ZP_04685368.1| putative ABC transporter [Streptomyces ghanaensis ATCC 14672]
 gi|291436742|ref|ZP_06576132.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339637|gb|EFE66593.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 262

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 91/240 (37%), Gaps = 10/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           +     +  +L   W+ +  G                       +++     ++ R+V  
Sbjct: 11  VARELWLPVLLVAAWWWLSAGSTSLYWPPLAEITDRFVDLWFFEHLVEDALPSVIRLVSG 70

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             I   + + +G+ +G  P +    +P  + + A P+    P+++  +       +    
Sbjct: 71  FGIGFAVAVVLGLALGSVPALEDATRPLVEFMRALPSVALLPIMMLLLG----TDDDMKV 126

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + + F + W IL N + G  +      +VA+ + ++ W   R++++P   P    GA  A
Sbjct: 127 ITIAFVSTWPILLNTVEGVRSVDPVLHQVAAGYRLSAWHRIRHLVVPAAMPQIFAGARVA 186

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +  A +++E+           GLG ++ +S        +  G++++     A N+  
Sbjct: 187 LSMSVVAMVLTEMVGSPG------GLGYFVLDSQRTFDIVAMWTGLIVLGLIGYAANKTF 240



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 100/251 (39%), Gaps = 20/251 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQYASRTTLRMLSAMVIS 79
           L   +++      L     +     + +I    +D+     L + A  + +R++S   I 
Sbjct: 15  LWLPVLLVAAWWWLSAGSTSLYWPPLAEITDRFVDLWFFEHLVEDALPSVIRLVSGFGIG 74

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                V          L     P+++ M+++P +  L   ++        KVI       
Sbjct: 75  FAVAVVLGLALGSVPALEDATRPLVEFMRALPSVALLPIMMLLLGTDDDMKVI------- 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I     W +  +  + + ++   L +V+  +RLS W +  +L VP +MP +     ++
Sbjct: 128 -TIAFVSTWPILLNTVEGVRSVDPVLHQVAAGYRLSAWHRIRHLVVPAAMPQIFAGARVA 186

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ-- 257
           +S     +V +EM+          G+G ++  + +  D++A+   ++ +  + +  ++  
Sbjct: 187 LSMSVVAMVLTEMVG------SPGGLGYFVLDSQRTFDIVAMWTGLIVLGLIGYAANKTF 240

Query: 258 -LLFRPMIVWS 267
            L+   ++ W 
Sbjct: 241 GLVEARVLAWH 251


>gi|170765814|ref|ZP_02900625.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia albertii TW07627]
 gi|170124960|gb|EDS93891.1| glycine betaine/L-proline ABC transporter, permease protein
           [Escherichia albertii TW07627]
          Length = 353

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +     +  ++  + +        A  T   +L+A++  +
Sbjct: 100 LLGMPAPVAIILFALLAWQISGAGMGVATLISLVAIGAIGAWSQAMVTLALVLTALLFCI 159

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 160 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 216

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 217 A-----LPPIIRLTILGINQVPADLIEASRSFGASPHQMLFKVQLPLAMPTIMAGVNQTL 271

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 272 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGIGIVILAIILDRL 322



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 11/177 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++
Sbjct: 157 FCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVV 212

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I      I+   I G +  P D  E + SF  +  +    + LP   P  + G      
Sbjct: 213 TIIFALPPIIRLTILGINQVPADLIEASRSFGASPHQMLFKVQLPLAMPTIMAGVNQTLM 272

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 273 LALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGIGIVILAIILDRL 322


>gi|119961771|ref|YP_948715.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter aurescens TC1]
 gi|119948630|gb|ABM07541.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Arthrobacter aurescens TC1]
          Length = 307

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +      ++ R V     A +  + +G+ I +   ++S + P  +L     A    
Sbjct: 100 EAGTIQGHIAASLTRSVAGFGAALVAGVSLGLLIAWYGRLNSVLNPLLELFRNTAALALL 159

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+    +     +       ++ +   + +L N IAG           A S  +  +R +
Sbjct: 160 PVFTLLLGIGEESK----ISIVAYAAFFPVLLNTIAGVKTVDPLLIRAARSLGLNSFRLF 215

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + +ILP   P   TG   A   +    I +E+           GLG  I  +      P+
Sbjct: 216 QKVILPSAVPTIFTGIRMAGTASILVLIAAEMVG------AKAGLGYLIVNAQSSFLIPD 269

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +  G+L +    L +N  L
Sbjct: 270 MYAGILTVSLLGLGVNFLL 288



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 90/243 (37%), Gaps = 23/243 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT---------LDVHSLPQYASRTTLRMLSAM 76
             V+  + +   G      P   V + P+           +  ++  + + +  R ++  
Sbjct: 60  AAVLAFLALWELGPTYLASPSTRVFLPPLHEVLLAWGKLFEAGTIQGHIAASLTRSVAGF 119

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             +L+       L A   RL  VL P+L++ ++   L  L    +             E 
Sbjct: 120 GAALVAGVSLGLLIAWYGRLNSVLNPLLELFRNTAALALLPVFTLLLGIG--------EE 171

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  +  +  + +  +    +  +   L   +RS  L+ ++ F  + +P ++P +   +
Sbjct: 172 SKISIVAYAAFFPVLLNTIAGVKTVDPLLIRAARSLGLNSFRLFQKVILPSAVPTIFTGI 231

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            M+ +     ++A+EM+          G+G  I  A     +  +   +LT+  +    +
Sbjct: 232 RMAGTASILVLIAAEMVGAKA------GLGYLIVNAQSSFLIPDMYAGILTVSLLGLGVN 285

Query: 257 QLL 259
            LL
Sbjct: 286 FLL 288


>gi|56414768|ref|YP_151843.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363696|ref|YP_002143333.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56129025|gb|AAV78531.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197095173|emb|CAR60723.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
          Length = 354

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   I  ++  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   +   IAWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 216 IFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|238896133|ref|YP_002920869.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238548451|dbj|BAH64802.1| glycine/betaine/proline transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 355

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q +++   +  +V  I +        A  T   +L+A++  +
Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + +I       F  +   +  +      +    P           
Sbjct: 64  PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +F        ++G+   ++  ++           +    +    V+  ++   +
Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324


>gi|251800142|ref|YP_003014873.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547768|gb|ACT04787.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 277

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 83/261 (31%), Gaps = 25/261 (9%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--FTYQDVLYVIWLGCI------- 385
              +         W   V  +A+  +  ++G +          +    W  C+       
Sbjct: 21  RKRRAGMPKWLYGWVLPVIVLALWESASALGLVSESALPAPSRIAEAFWKLCVDGDMAKH 80

Query: 386 ---TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +  R     ++     + +G++ G        + P  Q+L   P     PL +    
Sbjct: 81  VSTSAIRAGGGFLLGGATGLFLGVFTGLGKWAERTLDPSIQMLRTVPLLAVIPLFILWFG 140

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +      LL+  G+ + + F+   G  +      EV      +  +    +I+P  
Sbjct: 141 VGEFSK----VLLIALGSFFPLYFHTHLGVRSADRKLYEVTRILQYSKLQLLTKLIIPAA 196

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G   + G +W    V+E+         + G+G  I ++   G    V +G+++ 
Sbjct: 197 LPNILLGVRLSVGTSWLLLAVAEMMG------ASAGVGYMIQDARVYGQTDIVFVGIILF 250

Query: 563 CCFVLALN---RFLWHPLYLY 580
                  +   R +      +
Sbjct: 251 ALVGKLSDSVVRLVERRCLRW 271



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 92/253 (36%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L      + L        P  I +          + ++ S + +R     ++   
Sbjct: 38  VIVLALWESASALGLVSESALPAPSRIAEAFWKLCVDGDMAKHVSTSAIRAGGGFLLGGA 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                       +     L P + +++++P+L  +   +++F           E + +  
Sbjct: 98  TGLFLGVFTGLGKWAERTLDPSIQMLRTVPLLAVIPLFILWFGVG--------EFSKVLL 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + + F  +  + +  R L EV+R  + S  Q    L +P ++P ++  + +S+ 
Sbjct: 150 IALGSFFPLYFHTHLGVRSADRKLYEVTRILQYSKLQLLTKLIIPAALPNILLGVRLSVG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +  +EM+          G+G  I  A        +   ++    V  L D   +L
Sbjct: 210 TSWLLLAVAEMMGASA------GVGYMIQDARVYGQTDIVFVGIILFALVGKLSDSVVRL 263

Query: 259 LFRPMIVWSNKFR 271
           + R  + W+N ++
Sbjct: 264 VERRCLRWNNSYK 276


>gi|302522618|ref|ZP_07274960.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302431513|gb|EFL03329.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 303

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 97/254 (38%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R++ P +  ++  + V  I+    +    +   P  +   +        L  Y   +  R
Sbjct: 48  RKVLPPLISVVLVLAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIWTSVSR 107

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +++L+       L ++ R +   + PIL  +QS+P + ++   V++         
Sbjct: 108 GLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGLNSSMMY 167

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 168 A--------VILLGAVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPG 219

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I     +    G+G  +        +  +  A+  +L V
Sbjct: 220 YLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIV 277

Query: 252 IFLYDQLLFRPMIV 265
               D L+F P+  
Sbjct: 278 GIAIDLLIFSPLER 291



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 9/240 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    + W  V     +       G + + +T   +L  IW    ++ R +   ++A +
Sbjct: 61  LAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIW---TSVSRGLFGFLLALV 117

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I  P+G+ +     + + I P    L + P+  + P  V  +       +  +  +++ G
Sbjct: 118 IGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGL----NSSMMYAVILLG 173

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I   +++G    P  +     +   TG R   +I+LP   P Y+ G       +W 
Sbjct: 174 AVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWR 233

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           + + +E+ +         GLG  +       S   V L + ++    +A++  ++ PL  
Sbjct: 234 SLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 291


>gi|254386260|ref|ZP_05001570.1| ABC transporter [Streptomyces sp. Mg1]
 gi|194345115|gb|EDX26081.1| ABC transporter [Streptomyces sp. Mg1]
          Length = 265

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 19/267 (7%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P + +V +L R L             L   +    +  +    +     +  AW  +  
Sbjct: 4   APRAASVGRLGRLLRAAGLRSAAILALLALWETAPRLGLVDATFLPPVSEVAEAWWELL- 62

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       +      ++ R      IA ++ +P+G+ IG+   +++ + P  ++  
Sbjct: 63  --------ADGQLGEHTGASLIRSFGGFGIAVVVAVPLGLLIGWYRPVAALLGPLLEVFR 114

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
              A    P+ V  +     +       ++++   W IL N I+          ++A S 
Sbjct: 115 NTAALALLPVFVLLLGIGETSK----VSIVVYACVWPILLNTISAVGNADPTLVKLARSM 170

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++  R ++ +ILP   P   TG   A   +    + +E+           GLG  I  S
Sbjct: 171 DLSTPRLFQKVILPASVPAIFTGIRLAGAVSILVLVAAEMIG------AKAGLGYLINAS 224

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + P++  G++ +    +A N+ L
Sbjct: 225 QYNFAIPQMYAGIVTISAIGVAFNQLL 251



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L ++   + +R      I+++       L    R +  +L P+L++ ++   L  
Sbjct: 62  LADGQLGEHTGASLIRSFGGFGIAVVVAVPLGLLIGWYRPVAALLGPLLEVFRNTAALAL 121

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+        KV          +  + VW +  +   ++ N    L +++RS  LS
Sbjct: 122 LPVFVLLLGIGETSKVS--------IVVYACVWPILLNTISAVGNADPTLVKLARSMDLS 173

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P S+P +   + ++ +     +VA+EMI          G+G  I  +   
Sbjct: 174 TPRLFQKVILPASVPAIFTGIRLAGAVSILVLVAAEMIGAKA------GLGYLINASQYN 227

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +  +   ++T+  +   ++QLL    R + +W
Sbjct: 228 FAIPQMYAGIVTISAIGVAFNQLLVTIERRLSLW 261


>gi|296126609|ref|YP_003633861.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296018425|gb|ADG71662.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 266

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I    +++ RV++   IA +     G+ +G +P      +   + +   P      +++
Sbjct: 65  LIKNIYVSLLRVIIGFSIAFVFAFIFGMILGIKPERFEYFRNIIEFMRNVPPISLIAILI 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +      +++I  + + I  N+            EV  S   T  + +  I+
Sbjct: 125 LWFGIGEKSK----IIIIILASFFPIFINIRQSIGTVDKKLIEVGYSLGFTKLKIFFKIM 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G     G ++ A I +E+ +       ++GLG  I ++ +     +V+ G
Sbjct: 181 LPSALPSILAGMKIGLGYSFRAIIGAEMIA------ASSGLGYMILDAQQLSRSDKVIAG 234

Query: 559 VLIMCCFVLALNRFL 573
           ++ +       +   
Sbjct: 235 IITIGVLGYIFDILF 249



 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 96/218 (44%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ ++    I +   +L +    + LR++    I+ +F F++  +            
Sbjct: 46  LPSPQRVIRAFYIEIMNGNLIKNIYVSLLRVIIGFSIAFVFAFIFGMILGIKPERFEYFR 105

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I++ M+++P +  +   +++F      K+I   LA+ F IF         ++ QS+  +
Sbjct: 106 NIIEFMRNVPPISLIAILILWFGIGEKSKIIIIILASFFPIF--------INIRQSIGTV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L EV  S   +  + F+ + +P ++P ++  M + +   +  ++ +EMI        
Sbjct: 158 DKKLIEVGYSLGFTKLKIFFKIMLPSALPSILAGMKIGLGYSFRAIIGAEMIAASS---- 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +      ++  ++T+  + +++D L 
Sbjct: 214 --GLGYMILDAQQLSRSDKVIAGIITIGVLGYIFDILF 249


>gi|330807064|ref|YP_004351526.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375172|gb|AEA66522.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 283

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +IS+L     
Sbjct: 54  LMLAIVGGIAWHATRKVVATAVIVGLLFLVGAVGLWDKLMQTLALMLVATLISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   +V       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLAIVGGIAWHATRKVVATAVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|307941787|ref|ZP_07657141.1| glycine betaine/L-proline transport system permease protein ProW
           [Roseibium sp. TrichSKD4]
 gi|307774884|gb|EFO34091.1| glycine betaine/L-proline transport system permease protein ProW
           [Roseibium sp. TrichSKD4]
          Length = 302

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 101/236 (42%), Gaps = 19/236 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V ++GI+ +L   I+ T      + ++ +      + +   RT   +    +++++
Sbjct: 68  LAVLVALVGIVFLLSRNIKITIGAVVALCLIGL----FGMWEDTMRTIAMVTVCTLLAIV 123

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A+S R+  ++ P+LD+MQ++P   +L   V+ F     GKV G     ++A
Sbjct: 124 LGIPIGISMARSDRMQSIVNPVLDLMQTMPSFVYLIPVVMIFGL---GKVPGLIAIVVYA 180

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I       +       +  +  D+ E + +F  +  QK   + +P ++P ++  +  ++ 
Sbjct: 181 IP-----PIIRLTNLGIRLVDSDVLEAADAFGSNSRQKLINVQLPLALPTIMAGINQTIM 235

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                VV + +I V        G+G  +  AI  Q     L   L ++ +  ++D+
Sbjct: 236 MALAMVVVAALIGV-------KGLGQPVLNAIANQYFTMGLMNGLAIVAIAIIFDR 284



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 11/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V V  ++A ++ IP+GI +     + S + P   L+   P+ V+   VV       
Sbjct: 110 TIAMVTVCTLLAIVLGIPIGISMARSDRMQSIVNPVLDLMQTMPSFVYLIPVVMIFGLG- 168

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   + ++      I+     G     +D  E A +F     +    + LP   P 
Sbjct: 169 ---KVPGLIAIVVYAIPPIIRLTNLGIRLVDSDVLEAADAFGSNSRQKLINVQLPLALPT 225

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A    +V+ +           GLG  +  +     F   ++  L +   
Sbjct: 226 IMAGINQTIMMALAMVVVAALIG-------VKGLGQPVLNAIANQYFTMGLMNGLAIVAI 278

Query: 566 VLALNR 571
            +  +R
Sbjct: 279 AIIFDR 284


>gi|307727967|ref|YP_003911180.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307588492|gb|ADN61889.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 279

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 86/266 (32%), Gaps = 22/266 (8%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--- 376
           L   R              R +    + W      V +  A   +G I            
Sbjct: 4   LTSTRSRNVAAQPTRTGVSRTTLYTWLSWMIPAAVVLLWEAAARLGLIAPQVLPAPSSVL 63

Query: 377 ---------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +     +++ R     +I   + + +GI  GF P   + +    Q++ A
Sbjct: 64  ETAFNLARNGDLFVHLGVSLLRAASGFVIGGTLGLALGIVAGFSPLAQALLDRSIQMVRA 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PLV+                L++    + I  N + G         E+A    
Sbjct: 124 VPFLAMLPLVIVWFGVGET----AKIFLVVLAVFFPIYINTMLGIRQLDPKLLELARVVG 179

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +      R I+LPG  P  +TG   A   AW A +++E  +       T G+G    ++ 
Sbjct: 180 LERTAIVRRIVLPGAMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAR 233

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           E  +   +VL V++     +  +  +
Sbjct: 234 EFLNTNVIVLTVIVYAIIGVVADALV 259



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 17/251 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +L      + L   Q    P  +++          L  +   + LR  S  VI    
Sbjct: 37  AVVLLWEAAARLGLIAPQVLPAPSSVLETAFNLARNGDLFVHLGVSLLRAASGFVIGGTL 96

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +A  S     +L   + +++++P L  L   +V+F           E A IF +
Sbjct: 97  GLALGIVAGFSPLAQALLDRSIQMVRAVPFLAMLPLVIVWFGVG--------ETAKIFLV 148

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  +    +  +   L E++R   L        + +P +MP ++  +  +++ 
Sbjct: 149 VLAVFFPIYINTMLGIRQLDPKLLELARVVGLERTAIVRRIVLPGAMPSILTGVRYALAH 208

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
            W  +V +E +          GIG     A +  +   I+  ++    +  + D   +LL
Sbjct: 209 AWLALVIAETLA------TTKGIGFLAMDAREFLNTNVIVLTVIVYAIIGVVADALVRLL 262

Query: 260 FRPMIVWSNKF 270
               + W   +
Sbjct: 263 EARFLSWHANY 273


>gi|29831397|ref|NP_826031.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29608512|dbj|BAC72566.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 289

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 67/181 (37%), Gaps = 10/181 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++   ++A+++ +  G+ +         + P  ++L   PA    P+ +       
Sbjct: 61  SLTRILTGFLLAAVLGVATGVLVARSRLAEDLLGPPLEVLRPIPAIALVPVAILLFP--- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + +L +      A    ++E   +     WR    ++LPG  P 
Sbjct: 118 -SNEQGIVFITCTAAYFPVLVSTRHAVRALTPVWEEAVRTMGAGRWRVLGSVVLPGALPG 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +      +P V +G++ +   
Sbjct: 177 IFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVDYPGVFVGMVTIGVL 230

Query: 566 V 566
            
Sbjct: 231 G 231



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 17/254 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L     +     D+       L         + +  R+L+  +++ +       L A+SR
Sbjct: 28  LWLRFSQFPTVADVARAFAGRLGGDDYWTDLTDSLTRILTGFLLAAVLGVATGVLVARSR 87

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +L P L++++ IP +  +   ++ F           E   +F   T+  + +  S 
Sbjct: 88  LAEDLLGPPLEVLRPIPAIALVPVAILLF--------PSNEQGIVFITCTAAYFPVLVST 139

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +    EE  R+     W+    + +P ++PG+   + + +   W  V+++EMI 
Sbjct: 140 RHAVRALTPVWEEAVRTMGAGRWRVLGSVVLPGALPGIFGGLSVGIGVSWICVISAEMIS 199

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFR 271
                    G+G          D   +   M+T+  + +     +    R +  W  +  
Sbjct: 200 G------QYGVGYRTWQDYTVVDYPGVFVGMVTIGVLGWATSTAVEVAGRRLTRWLPRTS 253

Query: 272 LERTTGIYPADSWV 285
                 +      V
Sbjct: 254 YVPGARVRATAPPV 267


>gi|226331044|ref|ZP_03806562.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198]
 gi|225201839|gb|EEG84193.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198]
          Length = 254

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              A  T   +L++++  L+         A S R   ++ P+LD MQ+ P   +L   V+
Sbjct: 39  WSEAMVTLALVLTSLLFCLIIGLPLGIWLANSDRASKIVRPLLDAMQTTPAFVYLVPIVM 98

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G  +  IFA+       +       +  +P DL E ++SF  S  Q  +
Sbjct: 99  LFG---IGNVPGVVVTIIFALP-----PIVRLTILGIKQVPEDLIEAAQSFGASPRQMLF 150

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +  ++      VV + MI VG       G+G  +   I   D+   
Sbjct: 151 KVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLA 203

Query: 242 LYAMLTMLGVIFLYDQL 258
                 ++ +  + D+L
Sbjct: 204 AVGGAGIVILAIILDRL 220



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 11/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+  V+  ++   II +P+GIW+      S  ++P    +   PA V+   +V    
Sbjct: 42  AMVTLALVLTSLLFCLIIGLPLGIWLANSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFG 101

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 N+   ++ I      I+   I G    P D  E A SF  +  +    + LP  
Sbjct: 102 IG----NVPGVVVTIIFALPPIVRLTILGIKQVPEDLIEAAQSFGASPRQMLFKVQLPLA 157

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G       A +  +++ + + G       GLG  +     +       +G   +
Sbjct: 158 MPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGI 210

Query: 563 CCFVLALNRF 572
               + L+R 
Sbjct: 211 VILAIILDRL 220


>gi|221199449|ref|ZP_03572493.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221205649|ref|ZP_03578664.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221174487|gb|EEE06919.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221180734|gb|EEE13137.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 242

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 77/193 (39%), Gaps = 10/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++    +++ R+ V +  A +  +P+G+ +G    +   + P  Q L       + PL 
Sbjct: 45  HLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLA 104

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V             +  L+ F   W +L +  AG       + ++ +S   T      +I
Sbjct: 105 VMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRRELLVHI 160

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP I    + G   A G  W   + +E+           GLG  I ++ ++ ++ E+  
Sbjct: 161 VLPAIAGPLLNGTRLAIGILWIVLVPAEMLG------VNAGLGYLILDTRDRLAYAELTA 214

Query: 558 GVLIMCCFVLALN 570
            ++++      L+
Sbjct: 215 VIVVIGALGFVLD 227



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 17/209 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++A  +  R+   +  +LL       L  + + +  +L P    ++ +  L ++   
Sbjct: 45  HLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLA 104

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F           + A  F +  + +W +  S    +  I R   ++  S   +  + 
Sbjct: 105 VMSFGIG--------DRAIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRREL 156

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ +P     L+    +++   W  +V +EM+ V        G+G  I          
Sbjct: 157 LVHIVLPAIAGPLLNGTRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYA 210

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIV 265
            +   ++ +  + F+ D   +LL R ++ 
Sbjct: 211 ELTAVIVVIGALGFVLDGITRLLARALLA 239


>gi|166364630|ref|YP_001656903.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
 gi|166087003|dbj|BAG01711.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843]
          Length = 271

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 15/253 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L + I +           P  ++  +    +   L Q    + LR++    +  L
Sbjct: 34  IVPLILWLLISSFAGIESVFLPSPLAVIQALGKLAEQGFLIQDTITSFLRVVGGFFLGGL 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F      L      +  ++ PI+ +++ +P   F+   V+Y            E + I  
Sbjct: 94  FAIPLGILMGTFPSIRSLMEPIIGVVRYMPAPAFIPLLVIYLGIG--------ETSKIML 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   ++  T  +  ++  IPR+L EV+ +   +  Q  + +  P+ +P ++    ++M+
Sbjct: 146 IFIGTIFFNTLMIMDAVKFIPRELIEVTYTLGGTRKQVLFKVITPYIIPNVIDTFRVNMA 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  VV +E++   +      G+G  I LA K      I   ++ +  + F  D L FR
Sbjct: 206 AAWNLVVVAELVAADN------GLGKRILLAQKFLRTDEIFACLIVLGIIGFALD-LSFR 258

Query: 262 PMIVWSNKFRLER 274
             + W+ K+ + R
Sbjct: 259 LFLQWTCKWSITR 271



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 89/239 (37%), Gaps = 10/239 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
             L  +  +  ++         G+        +  I       +  ++I     +  RVV
Sbjct: 26  WTLMVSSIIVPLILWLLISSFAGIESVFLPSPLAVIQALGKLAEQGFLIQDTITSFLRVV 85

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +  +  IP+GI +G  P I S ++P   ++   PA  F PL+V  +     +    
Sbjct: 86  GGFFLGGLFAIPLGILMGTFPSIRSLMEPIIGVVRYMPAPAFIPLLVIYLGIGETSK--- 142

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +L+  GT ++    ++      P +  EV  +   T  +    +I P I P  +    
Sbjct: 143 -IMLIFIGTIFFNTLMIMDAVKFIPRELIEVTYTLGGTRKQVLFKVITPYIIPNVIDTFR 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                AWN  +V+E+ +         GLG  I  + +     E+   ++++     AL+
Sbjct: 202 VNMAAAWNLVVVAELVA------ADNGLGKRILLAQKFLRTDEIFACLIVLGIIGFALD 254


>gi|281355617|ref|ZP_06242111.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281318497|gb|EFB02517.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 297

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 86/203 (42%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             + ++  ++     + + +     +A +  IP GI +G    + +  +PF+++L A P 
Sbjct: 89  LFFAELGDMLRGLLSSSYLLGSAYGLALVTAIPAGIAVGSSRRLRAAAEPFSRVLGAIPP 148

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+ P  ++ +  +          ++  G  W +  N ++G    P+   + A   H+  
Sbjct: 149 IVYIPYAIALLPSFRS----ASIFVIWSGAFWPVFVNTVSGVVTIPDSLLDSARMLHLKR 204

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             ++  I+LPG  P  +TGA      ++     +E+         T GLG Y+   ++  
Sbjct: 205 SVFFFRILLPGAMPSILTGASLGLIFSFLLLTAAELIG------ATEGLGWYVKNFSDFA 258

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
            +  V++G+L +   V +L    
Sbjct: 259 DYGRVIVGILFIGIVVTSLMWLF 281



 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 87/236 (36%), Gaps = 14/236 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +LV  + +           P     +     ++  + +    ++  + SA  ++L+  
Sbjct: 60  AVLLVWQLASANFRLADPVLFPPPAAILALFFAELGDMLRGLLSSSYLLGSAYGLALVTA 119

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                    SRRL     P   ++ +IP + ++ + +                A+IF I+
Sbjct: 120 IPAGIAVGSSRRLRAAAEPFSRVLGAIPPIVYIPYAIALL--------PSFRSASIFVIW 171

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +   W +  +    +  IP  L + +R   L     F+ + +P +MP ++    + +   
Sbjct: 172 SGAFWPVFVNTVSGVVTIPDSLLDSARMLHLKRSVFFFRILLPGAMPSILTGASLGLIFS 231

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  + A+E+I          G+G Y+       D   ++  +L +  V+     L 
Sbjct: 232 FLLLTAAELIG------ATEGLGWYVKNFSDFADYGRVIVGILFIGIVVTSLMWLF 281


>gi|85704575|ref|ZP_01035677.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670983|gb|EAQ25842.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 651

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 91/568 (16%), Positives = 182/568 (32%), Gaps = 48/568 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLS 74
           N +  L   L   ++ +    +      R +  +   T    +L     +A  T   ++ 
Sbjct: 94  NRWPRLG-PLPWSVVALTAACLGYWLGGRRLALLAGGTFVWIALMGQWTWAMETLSVIVV 152

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A   S+L   +    A +  R+  V+ PIL+I QS+P   ++   VV+         +G 
Sbjct: 153 AAPFSVLMGLLMGIAAWRWHRVEAVMNPILNIAQSLPHFAYMIPVVVFIG-------VGP 205

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           +  AI  I  S V  M       L  +P ++ E  +    +GWQ    + +P +   ++ 
Sbjct: 206 KAGAIVTIIFS-VPPMIRMTLLGLRKVPPEVIESGKMCGSTGWQLMTRVRIPTARTEILV 264

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   +      VV +  I +      L          ++   +   +   +T++ +   
Sbjct: 265 GVNQVIMQCLAMVVLASFIGMPGLGQKL-------LQLLQALKIGRSIEIGITIVLLAVT 317

Query: 255 YDQLLFRPMIVWSNKFRLERTTG-IYPADSWVLYLFRKTNFLRFIGYSSWNFFS------ 307
            D+        W+ +       G  +     VL  +       F   +   FF+      
Sbjct: 318 LDRCS----KAWAERQPTHHEPGIGWGTRHRVLTTWAGLMVAGFALSALVPFFAEVGRGQ 373

Query: 308 ------PLSNNVKKLCRTL----GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                 PL   +  +  T+      +R+      L    +  +          +      
Sbjct: 374 SLSVADPLDAMMTWVIVTVDPVTQWLRWFLITWVLIPVRDALLWLPYTAVLALLAAAGFA 433

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              W+S    +  F Y  +        IT++ V+V + +A+    P+GIW       + +
Sbjct: 434 VGGWRSALICLGFFGYIALTGWWDRAMITVYTVLVAVAVATSFGFPLGIWAARYETRAKR 493

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +      L  FP+ ++   V+       +     + L        Y     I G    P 
Sbjct: 494 VLLLCDSLQTFPSFIYLIPVIMLFGVNDVAVVGAVVLFAAVPLIRY----TIEGLRGVPE 549

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A     T  +  R++ LP  FP  + G   +   +    I++       +     
Sbjct: 550 AMIEAADMSGATRAQCLRHVRLPLAFPTIMVGVNQSLMFSLFMVIIAAFIGTQDLGQE-- 607

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                   ST+ G    +   V  +   
Sbjct: 608 --MQRALSSTDVGKGLVLGFAVAFIGLM 633


>gi|148545510|ref|YP_001265612.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148509568|gb|ABQ76428.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313496603|gb|ADR57969.1| SsuC [Pseudomonas putida BIRD-1]
          Length = 265

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++          +  +A+   W S   +                  +  
Sbjct: 2   SRATSSNLTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVARK 262



 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 106/271 (39%), Gaps = 17/271 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P    +L   +    ++      +    P  +V      +    +  + + +  
Sbjct: 9   LTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGW 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI      V   +   S     +L   + +++++P L  +   +++F       
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 125 ----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 181 SILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
           +  L D   + L R  + W   +++ R  G 
Sbjct: 235 LGKLADLAARGLERVWLRWHPAYQVARKEGA 265


>gi|331003006|ref|ZP_08326518.1| hypothetical protein HMPREF0491_01380 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413050|gb|EGG92425.1| hypothetical protein HMPREF0491_01380 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 261

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 10/216 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G   ++  Y +      D   ++     +M   +    +  +I +P+GI + +       
Sbjct: 44  GKVLETFIYKLTGGVNPDGGSLLQHIVSSMKISLGGYFVGVLIGVPLGISMAWSRKFELF 103

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +P   ++   PA  + PL++  +   + +       ++ F        N  AG      
Sbjct: 104 AKPLFDVIRPIPALAWIPLMILWLGIGYESKVG----IIFFAAFISATINSYAGIKQTNK 159

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
               VA +F  +  +    + +P   P   TG   A G +W A           +   T 
Sbjct: 160 VHLWVAKTFGASNRQLLFKVAIPTAMPMIFTGLRLALGSSWVA------LVAAELLAATK 213

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  I  S   G    +++G++ +      L+  L
Sbjct: 214 GLGYMIQVSRMLGRPDVIIVGMVTIGIIGYLLSSIL 249



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 97/248 (39%), Gaps = 22/248 (8%)

Query: 22  LLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITL------DVHSLPQYASRTTLRML 73
           +   +L+  ++  + H I       P  +++     L      D  SL Q+   +    L
Sbjct: 18  VAGVLLIWELVTDVFHLISPMMLPAPGKVLETFIYKLTGGVNPDGGSLLQHIVSSMKISL 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               + +L         A SR+  +   P+ D+++ IP L ++   +++    Y  K   
Sbjct: 78  GGYFVGVLIGVPLGISMAWSRKFELFAKPLFDVIRPIPALAWIPLMILWLGIGYESK--- 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                +  IF +   + T + Y  +    +    V+++F  S  Q  + + +P +MP + 
Sbjct: 135 -----VGIIFFAAFISATINSYAGIKQTNKVHLWVAKTFGASNRQLLFKVAIPTAMPMIF 189

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++   W        +V  + +    G+G  I ++        I+  M+T+  + +
Sbjct: 190 TGLRLALGSSWV------ALVAAELLAATKGLGYMIQVSRMLGRPDVIIVGMVTIGIIGY 243

Query: 254 LYDQLLFR 261
           L   +L +
Sbjct: 244 LLSSILEK 251


>gi|323498902|ref|ZP_08103885.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
 gi|323316014|gb|EGA69042.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
          Length = 299

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +   RT   +    ++S++         A+S R+   + P+LD+MQ++P   +L   
Sbjct: 98  GMWEDTMRTLSIITVCTMLSIILGIPIGIAMARSNRVQSTVTPMLDVMQTMPAFVYLIPV 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GK+ G     I+AI       +       +  + +++ E + +F  S  Q+
Sbjct: 158 VMLLG---IGKIPGLIAVVIYAIP-----PVIRLTNLGIRLVDKEVLEAATAFGASAKQR 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q   
Sbjct: 210 LWGVQLPLAMPTIMAGINQTIMMALSMVVIASMIGV-------KGLGQPVLKSITNQYFT 262

Query: 240 AILYAMLTMLGVIFLYDQ 257
             L     ++ +  L+D+
Sbjct: 263 LGLLNGFAIVALAILFDR 280



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + I   C         +W+                +      T+  + V  +++ I
Sbjct: 60  STPWVIILAVCTGLVYMASRSWKLGLGCFVSLLLIGYFGMWEDTMRTLSIITVCTMLSII 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSTVTPMLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASAKQRLWGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 280


>gi|206578569|ref|YP_002240175.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288936921|ref|YP_003440980.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290510022|ref|ZP_06549392.1| taurine transporter subunit [Klebsiella sp. 1_1_55]
 gi|206567627|gb|ACI09403.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288891630|gb|ADC59948.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289776738|gb|EFD84736.1| taurine transporter subunit [Klebsiella sp. 1_1_55]
          Length = 275

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 101/267 (37%), Gaps = 19/267 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLY 378
           +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  + 
Sbjct: 14  LKWRWPLSRQLTLSVATLAVLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGFMD 73

Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                    ++ R+V+ ++ A +I +PVGI +G    +   + P  +L    P   + PL
Sbjct: 74  ATLWQHLAASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPL 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V        +      LL+       +  + +AG  +        A S   +  +    
Sbjct: 134 MVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWL 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+
Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVL 243

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580
            G+ ++      L    R L   L  +
Sbjct: 244 AGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 100/253 (39%), Gaps = 22/253 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +  + L        P  ++  +     P      +L Q+ + +  R++ A++
Sbjct: 33  VLLAVWWAVAALQLISPLFLPPPGQVLQKLITIAGPQGFMDATLWQHLAASLTRIVIALL 92

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            ++L           +  +  +L P++++ + +P L +L   V++F           E +
Sbjct: 93  AAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETS 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    +  S    + +  +     +RS   S  Q  W + +P ++P ++  + 
Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGALPEILTGLR 204

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL + 
Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258

Query: 257 --QLLFRPMIVWS 267
             + L R +  W 
Sbjct: 259 GLRALQRRLTPWH 271


>gi|325290854|ref|YP_004267035.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966255|gb|ADY57034.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 320

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 93/253 (36%), Gaps = 21/253 (8%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-------GCITMFRVVVL 393
           +  + +  F ++  +A  + W    ++ +       +  +W+         ++++R +  
Sbjct: 13  NKYIGMAIFLLLWQIAPSLGWLDQQFVPSLSVVLQSVGELWVKGGLFTHIMVSLWRTLNG 72

Query: 394 IIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           +I  ++I +P+G  +G   P +   + P  +LL         P+ +              
Sbjct: 73  LIAGTLIALPLGFILGRWFPSLREALNPLFRLLGQVNPFSLMPVFILFFGIG----ESAK 128

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             ++ +   W +LF+ + G         + A++ + +       ++LP   P   +G   
Sbjct: 129 IAVIAWVCVWPVLFHTLNGVKTVDPVLIKTAAAMNASRKELLIKVLLPAAAPSVFSGIRV 188

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR- 571
               ++   I +E+         + GLG  +  S      P +    L +    + LNR 
Sbjct: 189 GVEMSFFMLIAAEMIG------ASAGLGWLMHNSAMNYHIPRIYAASLCIVILGVILNRC 242

Query: 572 --FLWHPLYLYGT 582
             FL + ++ +  
Sbjct: 243 LYFLQNRVFFWKE 255



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 86/242 (35%), Gaps = 16/242 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVI 78
             +  F+L+  I   L    Q+      +V      L V   L  +   +  R L+ ++ 
Sbjct: 16  IGMAIFLLLWQIAPSLGWLDQQFVPSLSVVLQSVGELWVKGGLFTHIMVSLWRTLNGLIA 75

Query: 79  SLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             L       +  +    L   L P+  ++  +     +   +++F           E A
Sbjct: 76  GTLIALPLGFILGRWFPSLREALNPLFRLLGQVNPFSLMPVFILFFGIG--------ESA 127

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I    VW + F     +  +   L + + +   S  +    + +P + P +   + 
Sbjct: 128 KIAVIAWVCVWPVLFHTLNGVKTVDPVLIKTAAAMNASRKELLIKVLLPAAAPSVFSGIR 187

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +   +F ++A+EMI          G+G  +  +     +  I  A L ++ +  + ++
Sbjct: 188 VGVEMSFFMLIAAEMIGASA------GLGWLMHNSAMNYHIPRIYAASLCIVILGVILNR 241

Query: 258 LL 259
            L
Sbjct: 242 CL 243


>gi|330889287|gb|EGH21948.1| sulfonate ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 285

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVTGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I T   + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVTGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|33593593|ref|NP_881237.1| ABC transport protein, inner membrane component [Bordetella
           pertussis Tohama I]
 gi|33572949|emb|CAE42890.1| ABC transport protein, inner membrane component [Bordetella
           pertussis Tohama I]
 gi|332382999|gb|AEE67846.1| ABC transport protein, inner membrane component [Bordetella
           pertussis CS]
          Length = 264

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 90/231 (38%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L ++ +         +       +       +   +I    +++ R+V    I S I I
Sbjct: 27  GLAVWAWTSGSLFPSILFPGPQATLREGVRMLESGSIIVDAAVSLARIVAGFTIGSAIGI 86

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            VG+ IG+ P + +   P+ Q     P   +    +        +       ++++GT +
Sbjct: 87  VVGLLIGYFPMVRTAFNPYLQFFRFVPPIAWVSPAMIWFGVGETSK----IFIIVYGTVF 142

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  + +AG +    +    A  F  T W+ +R++++P      +TG   + G ++   I
Sbjct: 143 TVALSAVAGVADAHVNKIRAAQMFGATRWQIFRHVVIPSTVSPILTGMRVSMGISFMTVI 202

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+ +        +G+G  I  S    +  ++ +G+ ++ C     +R  
Sbjct: 203 AAEMLA------AESGIGYLILNSRLWMATDKIFVGIFVLGCLGYGADRIF 247



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 92/245 (37%), Gaps = 14/245 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + V    +  L        P+  +      L+  S+   A+ +  R+++   I      V
Sbjct: 28  LAVWAWTSGSLFPSILFPGPQATLREGVRMLESGSIIVDAAVSLARIVAGFTIGSAIGIV 87

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L      +     P L   + +P + +++  +++F           E + IF I   
Sbjct: 88  VGLLIGYFPMVRTAFNPYLQFFRFVPPIAWVSPAMIWFGVG--------ETSKIFIIVYG 139

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V+ +  S    + +   +    ++ F  + WQ F ++ +P ++  ++  M +SM   + 
Sbjct: 140 TVFTVALSAVAGVADAHVNKIRAAQMFGATRWQIFRHVVIPSTVSPILTGMRVSMGISFM 199

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            V+A+EM+          GIG  I  +        I   +  +  + +  D++    +  
Sbjct: 200 TVIAAEMLA------AESGIGYLILNSRLWMATDKIFVGIFVLGCLGYGADRIFDLIIGR 253

Query: 266 WSNKF 270
           W+ K+
Sbjct: 254 WARKY 258


>gi|309389354|gb|ADO77234.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 279

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 15/236 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            LV+  I  L+    +         +    +    +      T   +++++ I+L+    
Sbjct: 58  PLVLIAIFALIAWKLKGKRMALFAGLGLGLVLNLQMWDPLIVTLASIMTSVFIALIVGIP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + A ++ L ++  PILD MQ+IP   +L   +++F     G V G     +FAI   
Sbjct: 118 VGIIKAHNKTLDLITRPILDFMQTIPPFVYLIPALMFFGL---GNVSGVIATVVFAIAPP 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  +  +  +L+E   +F    WQ  + + +P +MP ++  +   +     
Sbjct: 175 -----IRLTYLGIQQVDEELKEAGHAFGAKWWQILFKIELPGAMPSIMMGINQCIMLSLS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            VV + MI VG       G+G  +  ++   ++     A L ++ +  + D++  R
Sbjct: 230 MVVIAAMIGVG-------GLGKPVLRSLNTVNIGLGFEAGLGVVIIAMVLDRIFGR 278



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 11/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+  ++  + IA I+ IPVGI       +    +P    +   P  V+    +  + +
Sbjct: 98  IVTLASIMTSVFIALIVGIPVGIIKAHNKTLDLITRPILDFMQTIPPFVYL---IPALMF 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           + L     +   ++F     I      G      + KE   +F    W+    I LPG  
Sbjct: 155 FGLGNVSGVIATVVFAIAPPIRL-TYLGIQQVDEELKEAGHAFGAKWWQILFKIELPGAM 213

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       + +  +++ +   G       GLG  +  S    +        L + 
Sbjct: 214 PSIMMGINQCIMLSLSMVVIAAMIGVG-------GLGKPVLRSLNTVNIGLGFEAGLGVV 266

Query: 564 CFVLALNRFLWH 575
              + L+R    
Sbjct: 267 IIAMVLDRIFGR 278


>gi|209883285|ref|YP_002287142.1| putative aliphatic sulfonates transport permease protein SsuC
           [Oligotropha carboxidovorans OM5]
 gi|209871481|gb|ACI91277.1| putative aliphatic sulfonates transport permease protein SsuC
           [Oligotropha carboxidovorans OM5]
          Length = 281

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 103/245 (42%), Gaps = 17/245 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + + L   +    P  I +++        L ++   T+ R+ +   + +LF  V   +  
Sbjct: 47  VAVGLSNGRLVPPPSKIFEMMEELARSGELWRHIFITSWRVGAGFGLGVLFGTVLGAVCG 106

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S     +L P L  +++IP + ++   +++            E++ +  I     + + 
Sbjct: 107 YSALARRLLDPTLQALRAIPSIAWVPLFILWLGIF--------EMSKVALIAVGVFFPIY 158

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             +  ++  + R + EV R+FRLSG      + +P  +P  V ++   +  GW FVVA+E
Sbjct: 159 LGLMGAVLGVDRKIVEVGRTFRLSGPAMIRRILLPAVLPSYVVSLRSGLGLGWMFVVAAE 218

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
           ++   +      G+G  +    +      IL A++    +    D L+   F P++ W +
Sbjct: 219 LMGASE------GLGYLLIDGQQLGKPAEILAAIIVFALLGKFTDWLIQVGFAPLLRWQD 272

Query: 269 KFRLE 273
            F  +
Sbjct: 273 AFSSQ 277



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 88/253 (34%), Gaps = 18/253 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-------LYVI 380
           P       +   +  ++ +    V   +A+ +   +   +       ++         + 
Sbjct: 19  PSRRWSRWAKPALGLIVPVV-IAVGWELAVAVGLSNGRLVPPPSKIFEMMEELARSGELW 77

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               IT +RV     +  +    +G   G+       + P  Q L A P+  + PL +  
Sbjct: 78  RHIFITSWRVGAGFGLGVLFGTVLGAVCGYSALARRLLDPTLQALRAIPSIAWVPLFILW 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +  + ++       L+  G  + I   ++           EV  +F ++G    R I+LP
Sbjct: 138 LGIFEMSK----VALIAVGVFFPIYLGLMGAVLGVDRKIVEVGRTFRLSGPAMIRRILLP 193

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            + P YV    +  G  W   + +E+         + GLG  + +  + G   E++  ++
Sbjct: 194 AVLPSYVVSLRSGLGLGWMFVVAAELMG------ASEGLGYLLIDGQQLGKPAEILAAII 247

Query: 561 IMCCFVLALNRFL 573
           +        +  +
Sbjct: 248 VFALLGKFTDWLI 260


>gi|161524468|ref|YP_001579480.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189350777|ref|YP_001946405.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160341897|gb|ABX14983.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189334799|dbj|BAG43869.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 290

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 10/168 (5%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG    +   + P  ++L   PA  + PL +       L+    +  +   G  + IL N
Sbjct: 117 IGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLN 172

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + GA A        A S    G+  +  +ILPG  P   TG     G AW   + +E+ 
Sbjct: 173 TVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMI 232

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +  +      G+G +   S    ++P++V+G+ ++    +  +  +  
Sbjct: 233 AGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 274



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++ +        P D+   +   L    LP +   +  R+L+    + +          
Sbjct: 59  LSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVAGVGLGLAIG 118

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 119 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 170

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G+  +  + +P + P +   + + M   WF +V +E
Sbjct: 171 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 230

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 231 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 274


>gi|89056438|ref|YP_511889.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88865987|gb|ABD56864.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 430

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FRVVV  ++ +++ IP+G  +G          P  + +   P     PLV+     
Sbjct: 237 GYSLFRVVVGFVLGALVGIPLGYAMGLSNWARGWFDPIVEFMRPVPPLALIPLVIIWAGI 296

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+     W +     AG S         A S   +  +  R++I+P   
Sbjct: 297 GEAGK----IVLLFLAALWIMAIAARAGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSL 352

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           P   TGA  A G  W             +     G G  I  ++   +  
Sbjct: 353 PEIFTGARVAMGVCWG------TVVAAELVAAVQGAGMMIMVASRFQNTD 396



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 8/145 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R++   V+  L           S        PI++ M+ +P L  +   
Sbjct: 231 TLIEHLGYSLFRVVVGFVLGALVGIPLGYAMGLSNWARGWFDPIVEFMRPVPPLALIPLV 290

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++      GK        I  +F + +W M  +    +  +       + S   S  Q 
Sbjct: 291 IIWAGIGEAGK--------IVLLFLAALWIMAIAARAGVSGVNISKVHAAYSLGASKAQI 342

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ VP S+P +     ++M   W
Sbjct: 343 MRHVIVPNSLPEIFTGARVAMGVCW 367


>gi|161502140|ref|YP_001569252.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863487|gb|ABX20110.1| hypothetical protein SARI_00163 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 354

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   +    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 107 PVAIILFALIAWQVSGVGMGIAAL-ISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLP 165

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 166 MGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 218

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++     
Sbjct: 219 -LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 97/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P       +   
Sbjct: 63  PLDSWV------TEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMP-------APVA 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I W     G+ I      I            +       IT+  V+  ++   +
Sbjct: 110 IILFALIAWQVSGVGMGIAALISLIAI--------GAIGAWSQAMITLALVLTALLFCVV 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|254228036|ref|ZP_04921466.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262395984|ref|YP_003287837.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|151939532|gb|EDN58360.1| ABC transporter, permease protein [Vibrio sp. Ex25]
 gi|262339578|gb|ACY53372.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
          Length = 299

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V+V+G+   L++    +           I +    + +   RT   +    ++++     
Sbjct: 64  VVVLGVCTALVYAASRSWKLAIACFGSLILIGYFGMWEDTMRTLSIITVCTMLAITLGIP 123

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI   
Sbjct: 124 IGIAMASSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +++ E + +F  S  Q+ + + +P +MP ++  +  ++     
Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASSKQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + +   C     A   +W+                +      T+  + V  ++A  
Sbjct: 60  STPWVVVLGVCTALVYAASRSWKLAIACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIT 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     I S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMASSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASSKQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280


>gi|257062962|ref|YP_003142634.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256790615|gb|ACV21285.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 244

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 26/253 (10%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-----------YVIWLGCITMFRVVV 392
           +      ++  + I   WQ     +      +VL            +     ++++RVV+
Sbjct: 1   MRRLLGYLLAIMFILAGWQLTAMALGSAALPEVLPALQNVVMYFDEIAPAFGVSLYRVVI 60

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++I +++ IP+G+  G  P + +   P    L   P  V  P+ +  +           
Sbjct: 61  AMVIGTVLAIPLGLVCGRSPRVDAVFAPVLYFLYPLPKVVLLPVFIVLLGLADA----PK 116

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+     + +L  V     + P D      S   +    +R++I+P   P   T    
Sbjct: 117 IALIALTIFFQVLVTVRDATKSVPEDSVLSVRSLGASRLDIYRHVIVPATLPELFTAQRI 176

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + G A      +E  +       +TGLG +IA++    ++P++  G++ M    + L   
Sbjct: 177 SSGTAVAILFFAESFAG------STGLGYFIADAWALLNYPKMFAGIIAMAVLGVILYEI 230

Query: 573 LWHPLYLYGTRCL 585
                +    R L
Sbjct: 231 -----FDIAERRL 238



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 90/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LLA + ++    +    +    +P  +  +  + +    +      +  R++ AMVI  +
Sbjct: 8   LLAIMFILAGWQLTAMALGSAALPEVLPALQNVVMYFDEIAPAFGVSLYRVVIAMVIGTV 67

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +  +S R+  V  P+L  +  +P +  L   +V            A+   I  
Sbjct: 68  LAIPLGLVCGRSPRVDAVFAPVLYFLYPLPKVVLLPVFIVLLGL--------ADAPKIAL 119

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  ++  +  ++P D     RS   S    + ++ VP ++P L     +S  
Sbjct: 120 IALTIFFQVLVTVRDATKSVPEDSVLSVRSLGASRLDIYRHVIVPATLPELFTAQRISSG 179

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
                +  +E            G+G +IA A    +   +   ++ M  +  +  ++   
Sbjct: 180 TAVAILFFAESFAGST------GLGYFIADAWALLNYPKMFAGIIAMAVLGVILYEIFDI 233

Query: 260 -FRPMIVW 266
             R +  W
Sbjct: 234 AERRLTRW 241


>gi|157146368|ref|YP_001453687.1| alkanesulfonate transporter permease subunit [Citrobacter koseri
           ATCC BAA-895]
 gi|157083573|gb|ABV13251.1| hypothetical protein CKO_02127 [Citrobacter koseri ATCC BAA-895]
          Length = 263

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 81/239 (33%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R  
Sbjct: 11  RVAPWFLPVGIVAVWQIASSMGWLSTRILPSPEGVIAAFWTLSASGELWQHLAISSWRAF 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   I + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFPLFVHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S         G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDIVVVAIILYALLGKLAD 239



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  I + +     +    P  ++           L Q+ + ++ R     
Sbjct: 14  PWFLPVGIVAVWQIASSMGWLSTRILPSPEGVIAAFWTLSASGELWQHLAISSWRAFIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I          ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG+  F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFPLFVHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANA------GIGYLAMNAREFLQTDIVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  +  +  T
Sbjct: 240 VSAQLLERVWLRWNPAYYTKEAT 262


>gi|77459006|ref|YP_348512.1| glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein, putative [Pseudomonas fluorescens Pf0-1]
 gi|77383009|gb|ABA74522.1| putative bifunctional protein, ATP-binding: permease [Pseudomonas
           fluorescens Pf0-1]
          Length = 698

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 92/237 (38%), Gaps = 16/237 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYASRTTLRMLSAMVISLLF 82
                +  + ++L   +   +   +     +  + +    +    T   + S+++I+L+ 
Sbjct: 465 WLPWPVCALALVLLAWRSAGLALALTSSAALLYIGLFGFWERTIATLALVGSSVLIALVI 524

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L AK      +L P+LD+MQ++P   +L   V +F     GK        IFA+
Sbjct: 525 GVPTGILLAKRPFARRLLTPLLDVMQTLPTFVYLIPAVAFFSV---GKTPAVIATVIFAL 581

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M       +  +P+D  E + +   + WQ    + +P +   L+  +  ++  
Sbjct: 582 A-----PMIRLTSLGIQEVPKDAVEAAIAHGANPWQTLVKVQLPLARRSLLLGINQTIVM 636

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               VV + +I  G       G+G  +  A++       + A + ++    + D+++
Sbjct: 637 SLSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGVAIVLCALIPDRII 686



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 16/240 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    + V     + +AW+S G  +   +   +LY+   G       T+  V   ++IA
Sbjct: 462 LLGWLPWPVCALALVLLAWRSAGLALALTSSAALLYIGLFGFWERTIATLALVGSSVLIA 521

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P GI +  RP     + P   ++   P  V+    V+  S       +   +  +
Sbjct: 522 LVIGVPTGILLAKRPFARRLLTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFAL 581

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P D  E A +     W+    + LP      + G       +
Sbjct: 582 A----PMIRLTSLGIQEVPKDAVEAAIAHGANPWQTLVKVQLPLARRSLLLGINQTIVMS 637

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            +  +V+ +   G       GLG  +  +       E VL  + +    L  +R +   L
Sbjct: 638 LSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGVAIVLCALIPDRIIQSSL 690


>gi|148252923|ref|YP_001237508.1| ABC transporter membrane protein [Bradyrhizobium sp. BTAi1]
 gi|146405096|gb|ABQ33602.1| Putative ABC transporter membrane protein [Bradyrhizobium sp.
           BTAi1]
          Length = 272

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 17/264 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCV--VCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             HF     +L       +     W  +  +  V           +           ++ 
Sbjct: 17  PGHFARRAARLLRGTVAIFAFLAAWEILPRLGLVDTTFLPPFSTALSAFVEMARSGELVE 76

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               +  R    +I+A  + +P+G+ IG+   ++  + P  +L          P+ V  +
Sbjct: 77  HLAASAGRAFSGLILAVAVGVPLGLVIGWYRSVAEILNPLLELFRNTAPLALLPVFVLML 136

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               ++       ++ +   W IL N ++GA          A S  ++  R +  +++P 
Sbjct: 137 GMGEVSK----VAMVFYACLWPILLNTVSGAREVDPLLIRSARSMALSQTRLFTRVVVPA 192

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG   A   +    I +E+           GLG  +  +      P++  G++ 
Sbjct: 193 SLPSIFTGIRIAGAYSILVLIAAEMVG------AKAGLGYLVNYAQFTFEIPKMYAGIVT 246

Query: 562 MCCFVLALNRFLWHPLYLYGTRCL 585
           +    L LN  L     +   R L
Sbjct: 247 LSLLGLVLNEVL-----VLAERRL 265



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 100/262 (38%), Gaps = 18/262 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASR 67
              + R+      + AF+    I+  L         P        + +     L ++ + 
Sbjct: 21  ARRAARLLRGTVAIFAFLAAWEILPRLGLVDTTFLPPFSTALSAFVEMARSGELVEHLAA 80

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R  S +++++        +    R +  +L P+L++ ++   L  L   V+      
Sbjct: 81  SAGRAFSGLILAVAVGVPLGLVIGWYRSVAEILNPLLELFRNTAPLALLPVFVLMLGMG- 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E++ +  +F + +W +  +       +   L   +RS  LS  + F  + VP 
Sbjct: 140 -------EVSKVAMVFYACLWPILLNTVSGAREVDPLLIRSARSMALSQTRLFTRVVVPA 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P +   + ++ +     ++A+EM+          G+G  +  A    ++  +   ++T
Sbjct: 193 SLPSIFTGIRIAGAYSILVLIAAEMVGAKA------GLGYLVNYAQFTFEIPKMYAGIVT 246

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  +  + +++L    R +  W
Sbjct: 247 LSLLGLVLNEVLVLAERRLTAW 268


>gi|331651296|ref|ZP_08352321.1| taurine transport system permease protein TauC [Escherichia coli
           M718]
 gi|331051037|gb|EGI23089.1| taurine transport system permease protein TauC [Escherichia coli
           M718]
          Length = 275

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R+L A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRILLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|47060338|ref|NP_665793.2| ANL55 [Synechococcus elongatus PCC 7942]
 gi|81230349|ref|YP_398727.1| sulfonate ABC transporter, permease protein, putative
           [Synechococcus elongatus PCC 7942]
 gi|5823450|gb|AAD53164.1|AF176824_7 cytoplasmic membrane protein SrpM [Synechococcus elongatus PCC
           7942]
 gi|47059669|gb|AAM81180.2| ANL55 [Synechococcus elongatus PCC 7942]
 gi|81170321|gb|ABB58659.1| sulfonate ABC transporter, permease protein, putative
           [Synechococcus elongatus PCC 7942]
          Length = 266

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV V ++ A  + +PVG+  G  P I        Q +       + P+ V     
Sbjct: 76  GASLQRVAVGLLAAIAVGVPVGLLFGLVPMIERSASGALQFIRMISPLSWMPIAVMAFGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L     +  L+     W IL +  +G +A  +    +A S   T     R I++P I 
Sbjct: 136 GDL----PVYFLLAIAAVWPILLSTSSGTAAVNHKLLLLARSLCATRSETIRRIVIPAIV 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   + +E+         ++GLG +I ++ ++ ++ E+   +L + 
Sbjct: 192 PQILVGVRLAIGTIWIVLVPAEMLG------VSSGLGYFILDTRDRIAYNELTAVLLAIG 245

Query: 564 CFVLALN 570
               AL+
Sbjct: 246 IIGCALD 252



 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 76/221 (34%), Gaps = 14/221 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           + +   P   +  +   L   +L  +   +  R+   ++ ++        L      +  
Sbjct: 49  VWQAFAPESAIAALGKLLFNGTLWPHIGASLQRVAVGLLAAIAVGVPVGLLFGLVPMIER 108

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
                L  ++ I  L ++   V+ F           +L   F +  + VW +  S     
Sbjct: 109 SASGALQFIRMISPLSWMPIAVMAFGIG--------DLPVYFLLAIAAVWPILLSTSSGT 160

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L  ++RS   +  +    + +P  +P ++  + +++   W  +V +EM+ V   
Sbjct: 161 AAVNHKLLLLARSLCATRSETIRRIVIPAIVPQILVGVRLAIGTIWIVLVPAEMLGVSS- 219

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G +I           +   +L +  +    D  L
Sbjct: 220 -----GLGYFILDTRDRIAYNELTAVLLAIGIIGCALDWSL 255


>gi|33592075|ref|NP_879719.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis Tohama I]
 gi|33571719|emb|CAE41218.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|332381491|gb|AEE66338.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis CS]
          Length = 275

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 9/197 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M R++  + +A+ +   +GI IG         +P   L    P   + P+
Sbjct: 70  GQLYRHVYYSMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +       N    L++     + ++ NV+AG          VA S   +  + +  
Sbjct: 130 LLLLIGV----DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFK 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+PGI PY +TG     G AW A I +E+ +       + GLG  I E++E      + 
Sbjct: 186 VIVPGILPYLITGVRLGSGYAWRALIAAEMLA-----ASSYGLGFMIYEASEFMDMTTIY 240

Query: 557 LGVLIMCCFVLALNRFL 573
            G++++      +   L
Sbjct: 241 GGLIMIALLGYLIENVL 257



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 82/201 (40%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   + +R+L+ + ++     +   L   +R    V  P+L +   +P L +   
Sbjct: 70  GQLYRHVYYSMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPI 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++                 I  +F +  + +  ++   + N+   +  V+RS   S  Q
Sbjct: 130 LLLLIGVD--------NKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQ 181

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + VP  +P L+  + +     W  ++A+EM+          G+G  I  A +  D+
Sbjct: 182 IFFKVIVPGILPYLITGVRLGSGYAWRALIAAEMLAASSY-----GLGFMIYEASEFMDM 236

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I   ++ +  + +L + +L
Sbjct: 237 TTIYGGLIMIALLGYLIENVL 257


>gi|333029180|ref|ZP_08457241.1| binding-protein-dependent transport systems inner membrane
           component [Bacteroides coprosuis DSM 18011]
 gi|332739777|gb|EGJ70259.1| binding-protein-dependent transport systems inner membrane
           component [Bacteroides coprosuis DSM 18011]
          Length = 281

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFT 83
               I II + +   ++      +  ++ + L       +    T   +LS+  I+LL  
Sbjct: 47  IPFWITIIVMAILAWKKAGKGVALFSVLGLLLIWGMGFWEPTMETLALVLSSTFIALLIG 106

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A S R   +L P+LD MQ++P   +L   V++F     G V GA    IFA+ 
Sbjct: 107 VPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYLIPAVLFFGL---GPVPGAFATVIFAMP 163

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +       +  +P+++ E + S   + WQ  + + +P ++P ++  +  ++   
Sbjct: 164 -----PVVRLTGLGIRQVPKNIVEATTSLGATRWQLLFKVQLPLALPTILTGVNQTIMMS 218

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 219 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 266



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 84/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L+   F +   V   +AW+  G  V  F+   +L +  +G       T+  V+    IA
Sbjct: 43  ILNSIPFWITIIVMAILAWKKAGKGVALFSVLGLLLIWGMGFWEPTMETLALVLSSTFIA 102

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+G+W  +       ++P    +   PA V+    V       +       +   
Sbjct: 103 LLIGVPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 160

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P +  E  +S   T W+    + LP   P  +TG       +
Sbjct: 161 --AMPPVVRLTGLGIRQVPKNIVEATTSLGATRWQLLFKVQLPLALPTILTGVNQTIMMS 218

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 219 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 266


>gi|295703658|ref|YP_003596733.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           DSM 319]
 gi|294801317|gb|ADF38383.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium DSM 319]
          Length = 287

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +L++ +ISLLF      L+ +  ++G V+ PILDIMQ++P   +L  +
Sbjct: 89  NLWEASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPS 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + A+ A F   +          L  +P+   E + +F  + WQK
Sbjct: 149 VLLFGLG--------NVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQK 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +   +      VV S M+  G       G+G+ +  +I   D+ 
Sbjct: 201 LIKVQLPLALPMIMSGVNQVIMLSLSMVVISSMVGAG-------GLGAEVLRSISMLDVG 253

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 + ++ +  + D+L
Sbjct: 254 LGFIGGIAVVIIAVILDRL 272



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 11/212 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+   +          L +     +T+  V+   II+ +  +P+GI       + + I+P
Sbjct: 72  WKIAVFTCFGLLLIISLNLWEASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKP 131

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              ++   PA V+    V      ++   +   +  +       L     G    P    
Sbjct: 132 ILDIMQTMPAFVYLIPSVLLFGLGNVTALIATFIFAMPPAVRLTLL----GLQQVPQTTL 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A +F  T W+    + LP   P  ++G       + +  ++S +   G       GLG
Sbjct: 188 EAAEAFGATEWQKLIKVQLPLALPMIMSGVNQVIMLSLSMVVISSMVGAG-------GLG 240

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  S          +G + +    + L+R 
Sbjct: 241 AEVLRSISMLDVGLGFIGGIAVVIIAVILDRL 272


>gi|312116273|ref|YP_004013869.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221402|gb|ADP72770.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 280

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHG-------IQETTVPRDIVDIVPIT 55
           L  I PP      F +  +++  +L + I+ +                 P  + +   + 
Sbjct: 15  LAEIRPPSRRVARFFSKINVVGLLLPLIIVTLWQAASTYQWVEAVFLPAPVKVAEAFWVM 74

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L      +   +  A+V       V    A  S+R+     P  D ++ IP + +
Sbjct: 75  LTKQQLANDFISSVSIVGQALVYGATAAIVLGVAAGLSKRVEQFFGPTFDTLRHIPGIAW 134

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V++     P KV+    A  F +F         +  Q + N+ +   E++    L+
Sbjct: 135 LPLIVLWLGIGAPAKVLVIAKAVFFPVF--------LNTLQGIRNVEKSHIELANVLTLN 186

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ    + +P + P ++ ++  +    W  VV +E +        L G+G  I  A   
Sbjct: 187 RWQMVRKVVLPSAFPSIMVSLRYAAGLAWAMVVIAEGLSG------LEGLGFLIFRAQGL 240

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271
                ++  M+ +  V F  D++++   R ++ W   F 
Sbjct: 241 LLTDQLVVCMIIIGLVGFTIDRIMYLAQRRLLRWKQGFE 279



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 87/268 (32%), Gaps = 20/268 (7%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-- 382
                   +  S   V  +L       +   A    W    ++       +  +V+    
Sbjct: 19  RPPSRRVARFFSKINVVGLLLPLIIVTLWQAASTYQWVEAVFLPAPVKVAEAFWVMLTKQ 78

Query: 383 -----GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   ++  V   ++  +   I +G+  G    +     P    L   P   + PL+
Sbjct: 79  QLANDFISSVSIVGQALVYGATAAIVLGVAAGLSKRVEQFFGPTFDTLRHIPGIAWLPLI 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +            L++     + +  N + G         E+A+   +  W+  R +
Sbjct: 139 VLWLGIGA----PAKVLVIAKAVFFPVFLNTLQGIRNVEKSHIELANVLTLNRWQMVRKV 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP  FP  +     A G AW   +++E  S         GLG  I  +       ++V+
Sbjct: 195 VLPSAFPSIMVSLRYAAGLAWAMVVIAEGLSG------LEGLGFLIFRAQGLLLTDQLVV 248

Query: 558 GVLIMCCFVLALNRFLW---HPLYLYGT 582
            ++I+      ++R ++     L  +  
Sbjct: 249 CMIIIGLVGFTIDRIMYLAQRRLLRWKQ 276


>gi|238792918|ref|ZP_04636548.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC
           29909]
 gi|238727772|gb|EEQ19296.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC
           29909]
          Length = 280

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ ++ A  + +P GI +G    +   + P  ++    P   + PL+V     
Sbjct: 86  AASLGRILIALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGI 145

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +    +AG  +        A +   + W+   +++LP   
Sbjct: 146 GETSK----ILLIYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASHWQVLWFVVLPSAL 201

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 202 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 255

Query: 564 CFVLALN---RFLWHPLYLY 580
                +    R +   L  +
Sbjct: 256 IIAFGMELSLRAIQRRLTPW 275



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 104/253 (41%), Gaps = 22/253 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYASRTTLRMLSAM 76
           ++   L   +  + L        P+ ++  + +          +L Q+ + +  R+L A+
Sbjct: 37  IVVVALWWAVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIAL 96

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + ++            S  +  VL P+++I + +P L +L   V++F           E 
Sbjct: 97  LAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ET 148

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I+ +    +T +    + ++ +     +R+   S WQ  W++ +P ++P ++  +
Sbjct: 149 SKILLIYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASHWQVLWFVVLPSALPEILTGI 208

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF--- 253
            + +  GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   
Sbjct: 209 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGME 262

Query: 254 LYDQLLFRPMIVW 266
           L  + + R +  W
Sbjct: 263 LSLRAIQRRLTPW 275


>gi|121607756|ref|YP_995563.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552396|gb|ABM56545.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 281

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++  V +  ++A+   + +G+ +G    + + + P   LL   P   + PL +  + 
Sbjct: 88  ALRSVRLVGLGFVVAATPGVLLGLAMGASRTVEALVNPVFLLLRPIPPLAWIPLAIVWLG 147

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      +++        + N  +G         E ++   ITGWR+WR +++PG 
Sbjct: 148 LGDA----AKVMVIFVAAFVPSVINSFSGVRQIDRPLLEASAMLRITGWRYWREVLIPGA 203

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG   +   +W   + +E+           GLG  + +  +    P +++G++ +
Sbjct: 204 LPSIFTGLRLSLQASWTTLVAAELVG------AVAGLGQILNQGAQDIHPPMILVGMISV 257

Query: 563 CCFVLALNRFL 573
                 + R L
Sbjct: 258 ALCGWLMTRAL 268



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++A R+   +    V++     +       SR +  ++ P+  +++ IP L ++   +V+
Sbjct: 86  EHALRSVRLVGLGFVVAATPGVLLGLAMGASRTVEALVNPVFLLLRPIPPLAWIPLAIVW 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       + A +  IF +       + +  +  I R L E S   R++GW+ +  
Sbjct: 146 LGLG--------DAAKVMVIFVAAFVPSVINSFSGVRQIDRPLLEASAMLRITGWRYWRE 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + +S+   W  +VA+E++        + G+G  +    ++     IL
Sbjct: 198 VLIPGALPSIFTGLRLSLQASWTTLVAAELVG------AVAGLGQILNQGAQDIHPPMIL 251

Query: 243 YAMLTMLGVIFLYDQLL 259
             M+++    +L  + L
Sbjct: 252 VGMISVALCGWLMTRAL 268


>gi|295400814|ref|ZP_06810790.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111335|ref|YP_003989651.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|294977077|gb|EFG52679.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216436|gb|ADP75040.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 255

 Score =  117 bits (293), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R ++  + A I  + +G+ +G    + + I P  Q+L       + P +V      
Sbjct: 60  VSFIRFLIGYLSAVITAVILGLMLGRLAKLWNIIDPIVQILRPISPIAWSPFIVLWFGIG 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               ++   +++     + +L + ++        + +VA +F I        II P  FP
Sbjct: 120 ----DIPAIVIIFIAAFFPVLLSTVSAVKKVDRTYLKVAENFEIKQPHLMTKIIFPAAFP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +   G   A G AW   +  E+          +GLG  I ++        V+ 
Sbjct: 176 FIANGLHIAIGTAWIFLVAGEMVG------AQSGLGYLIVDARNSLRLDLVLA 222



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 104/260 (40%), Gaps = 16/260 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            ++++   I      + +   + ++  +       P  +   + + +   +L  +   + 
Sbjct: 3   TAKKLTNVIIGFSILIALWQTVIMIGNYEDALFPSPLKVGKGIWLLIANGTLLVHLKVSF 62

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R L   + +++   +   +  +  +L  ++ PI+ I++ I  + +  F V++F      
Sbjct: 63  IRFLIGYLSAVITAVILGLMLGRLAKLWNIIDPIVQILRPISPIAWSPFIVLWFGIG--- 119

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                ++ AI  IF +  + +  S   ++  + R   +V+ +F +        +  P + 
Sbjct: 120 -----DIPAIVIIFIAAFFPVLLSTVSAVKKVDRTYLKVAENFEIKQPHLMTKIIFPAAF 174

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + +++   W F+VA EM+          G+G  I  A     L  +L  ++ + 
Sbjct: 175 PFIANGLHIAIGTAWIFLVAGEMVG------AQSGLGYLIVDARNSLRLDLVLAGIIFIG 228

Query: 250 GVIFLYDQLLFRPMIVWSNK 269
            +  + D+ + +    W  K
Sbjct: 229 ILGLILDKAI-QLFERWIEK 247


>gi|254560148|ref|YP_003067243.1| taurine ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254267426|emb|CAX23265.1| ABC transporter, permease component; putative taurine transporter
           [Methylobacterium extorquens DM4]
          Length = 256

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     +A+   +P+G+ IG  P + + + P  Q+L   P   + PL +      
Sbjct: 63  ASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLG 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+  G  + IL N + G  +      E A+    TG   +  ++LP   P
Sbjct: 123 GTS----AFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G AW   +V E+          TGLGA I E+ +      V+ G+ ++  
Sbjct: 179 SIFTGLRLGLGFAWVVIVVGEM------TGVQTGLGAVIMEARQLSRTEIVICGMGVIGV 232

Query: 565 FVLALNRFLWH 575
                +  +  
Sbjct: 233 AGFVSDWIVMR 243



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   +  R+     ++         +  +   +  +L P+L I++ IP+  +L  
Sbjct: 55  ATLWSHLWASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPL 114

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             +A F +F    + +  +    + ++   L E +     +G  
Sbjct: 115 AMILFGLGGT--------SAFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPA 166

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +F  + +P ++P +   + + +   W  +V  EM  V        G+G+ I  A +    
Sbjct: 167 QFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVQT------GLGAVIMEARQLSRT 220

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             ++  M  +    F+ D ++    R ++ WS 
Sbjct: 221 EIVICGMGVIGVAGFVSDWIVMRIGRRLLSWSP 253


>gi|114769693|ref|ZP_01447303.1| putative permease protein [alpha proteobacterium HTCC2255]
 gi|114549398|gb|EAU52280.1| putative permease protein [alpha proteobacterium HTCC2255]
          Length = 303

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 96/237 (40%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               + +IG ++ +     + +V   +     + +    + +    T   +  A ++ + 
Sbjct: 67  WPIILFIIGGLSWIGSRSWKMSVGAVLA---FVAIGWMDMWEDTMATLAIVSVATLLCIA 123

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    ++S R   ++ P+LD+MQ+IP   +L   V+       GKV G     + A
Sbjct: 124 IGIPIGIWMSRSDRAQRIITPVLDVMQTIPSFVYLIPVVMLLG---IGKVPG-----LLA 175

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +       +       +  +  ++ E + +F  +  QK + + +P ++P +   +  ++ 
Sbjct: 176 VMIYASPPIIRLTNLGIRLVDAEVLEAADAFGSNYRQKLFQVQIPLALPNIFAGVNQTIM 235

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI V       PG+G  +  A+  Q L   L   L ++ +  ++D++
Sbjct: 236 MSLSMVVIAAMIGV-------PGLGVPVLRAVSNQYLALGLMNGLAIVAIAIIFDRV 285



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 71/232 (30%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I +           +W+     V  F     + +      T+  V V  ++   
Sbjct: 64  ATPWPIILFIIGGLSWIGSRSWKMSVGAVLAFVAIGWMDMWEDTMATLAIVSVATLLCIA 123

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW+         I P   ++   P+ V+   VV  +        +   L ++  
Sbjct: 124 IGIPIGIWMSRSDRAQRIITPVLDVMQTIPSFVYLIPVVMLLGIG----KVPGLLAVMIY 179

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+     G      +  E A +F     +    + +P   P    G       + +
Sbjct: 180 ASPPIIRLTNLGIRLVDAEVLEAADAFGSNYRQKLFQVQIPLALPNIFAGVNQTIMMSLS 239

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  +  +         ++  L +    +  +R
Sbjct: 240 MVVIAAMIG-------VPGLGVPVLRAVSNQYLALGLMNGLAIVAIAIIFDR 284


>gi|21623838|dbj|BAC00974.1| ABC-type transporter membrane permease component [Pseudomonas
           putida]
          Length = 265

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++             +A+   W S   +                  +  
Sbjct: 2   SRATSNNLGQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVARK 262



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 104/271 (38%), Gaps = 17/271 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + +R+ P    +L        ++      +    P  +V      +    +  + + +  
Sbjct: 9   LGQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGW 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI      V   +   S     +L   + +++++P L  +   +++F       
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 125 ----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 181 SILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
           +  L D   + L R  + W   +++ R  G 
Sbjct: 235 LGKLADLAARGLERVWLRWHPAYQVARKEGA 265


>gi|317127058|ref|YP_004093340.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472006|gb|ADU28609.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 300

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +LV+ +I   L G +       IV +  I      L +    T   +L+A ++S++ 
Sbjct: 73  IITILVVAVIAYFLTGRKFGLPAFSIVGLWLIH--NQGLWEELMYTFTLVLNASILSVII 130

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L AK+     ++ P+LD MQ++P   +L   V +F     G V G   + +FA 
Sbjct: 131 GVPIGILMAKNNTAEAIIKPVLDFMQTMPAFVYLLPAVAFFS---IGMVPGVFASLVFAT 187

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  + ++L E + +F  +G QK + + +P +   ++  +  ++  
Sbjct: 188 P-----PTIRFTNLGIRQVSKELVEAADAFGSTGSQKLFKVELPMARATIMAGINQTVML 242

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          G+G  +  A++   +     A + ++ +  + D+L
Sbjct: 243 ALSMVVIASMI-------GAKGLGREVLSALQRAQVGPGFVAGIGIVILAIIIDRL 291



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  ++ I    V+     G  +    + +          +      T   V+   I++ I
Sbjct: 70  VPPIITILVVAVIAYFLTGRKFGLPAFSIVGLWLIHNQGLWEELMYTFTLVLNASILSVI 129

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI +       + I+P    +   PA V+    +  V+++ +     +   ++F 
Sbjct: 130 IGVPIGILMAKNNTAEAIIKPVLDFMQTMPAFVYL---LPAVAFFSIGMVPGVFASLVFA 186

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T   I F    G      +  E A +F  TG +    + LP      + G       A +
Sbjct: 187 TPPTIRF-TNLGIRQVSKELVEAADAFGSTGSQKLFKVELPMARATIMAGINQTVMLALS 245

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  +  + ++       +  + +    + ++R 
Sbjct: 246 MVVIASMIG-------AKGLGREVLSALQRAQVGPGFVAGIGIVILAIIIDRL 291


>gi|16761591|ref|NP_457208.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29143071|ref|NP_806413.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|168233771|ref|ZP_02658829.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168238725|ref|ZP_02663783.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194444232|ref|YP_002042055.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472631|ref|ZP_03078615.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194733925|ref|YP_002115766.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|213163680|ref|ZP_03349390.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213424577|ref|ZP_03357366.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213581947|ref|ZP_03363773.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213618844|ref|ZP_03372670.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213650061|ref|ZP_03380114.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213859649|ref|ZP_03385353.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|289824479|ref|ZP_06544055.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25306099|pir||AB0842 glycine betaine/L-proline transport system permease protein P
           STY2936 [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16503892|emb|CAD05921.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138704|gb|AAO70273.1| glycine betaine/L-proline transport system permease protein P
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|194402895|gb|ACF63117.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194458995|gb|EDX47834.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194709427|gb|ACF88648.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197288523|gb|EDY27900.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205332211|gb|EDZ18975.1| glycine betaine/L-proline transport system permease protein ProW
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 354

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   +    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 107 PVAIILFALIAWQVSGVGMGIAAL-ISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLP 165

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 166 MGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 218

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++     
Sbjct: 219 -LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 100/303 (33%), Gaps = 21/303 (6%)

Query: 272 LERTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
           L       P    +L  F KT      ++        +      + +   +  I   F +
Sbjct: 40  LNSAPAPAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQ 99

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             L + +   +     I W     G+ I      I            +       IT+  
Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIAALISLIAI--------GAIGAWSQAMITLAL 151

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++   +I +P+GIW+   P  +  ++P    +   PA V+   +V          N
Sbjct: 152 VLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----N 207

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   ++ I      I+   I G +  P D  E + SF  +  +    + LP   P  + G
Sbjct: 208 VPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAG 267

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A +  +++ + + G       GLG  +     +       +G + +    + L
Sbjct: 268 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIIL 320

Query: 570 NRF 572
           +R 
Sbjct: 321 DRL 323


>gi|261819400|ref|YP_003257506.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261603413|gb|ACX85899.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 264

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 106/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P +  +   V     +       +    P  ++      +    L Q+ + +  
Sbjct: 8   LAQRLAPFLLPVTLLVAWQISVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHLAISGW 67

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L    I      V   +   SR    +L   + +++++P L  +   +++F       
Sbjct: 68  RALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +P ++P
Sbjct: 124 ----EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALP 179

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 180 SIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R  + W+  ++
Sbjct: 234 LGKLADVSAQGLERIWLRWNPAYQ 257



 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G   G        +    Q++   P     PLV+     
Sbjct: 63  AISGWRALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + +  N   G         E+A S+ ++G   +  ++LPG  
Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239


>gi|312111380|ref|YP_003989696.1| taurine ABC transporter inner membrane protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216481|gb|ADP75085.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 264

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+ + +I+A    +P+GI+ G   +I +   P  +     P   ++ L+V  +    
Sbjct: 72  SLYRLFLALILAVFTAVPLGIFCGISKYILAIFDPIIEFYRPLPPLAYYALLVLWLGI-- 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     L+       +  + ++     P +    A S   +  +   YIILP   P 
Sbjct: 130 --DDKSKVALLFLSAFAPLFISTVSSVQRVPQERINGALSLGASKPKVLLYIILPSCLPD 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG  TA G  +   + +E+ +       T+G+G  + ++++      V +G+++M   
Sbjct: 188 IITGFRTAIGVTYATLVAAEMVA------ATSGIGWMVLDASKYLRSDIVFVGIILMGGI 241

Query: 566 VLALNRFLWHPLYL 579
            + ++  +   LY 
Sbjct: 242 AILMDGII--RLYQ 253



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 80/201 (39%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   +  R+  A+++++            S+ +  +  PI++  + +P L +   
Sbjct: 63  ASLSTHILNSLYRLFLALILAVFTAVPLGIFCGISKYILAIFDPIIEFYRPLPPLAYYAL 122

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++            + + +  +F S    +  S   S+  +P++    + S   S  +
Sbjct: 123 LVLWLGID--------DKSKVALLFLSAFAPLFISTVSSVQRVPQERINGALSLGASKPK 174

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P  +P ++     ++   +  +VA+EM+          GIG  +  A K    
Sbjct: 175 VLLYIILPSCLPDIITGFRTAIGVTYATLVAAEMVA------ATSGIGWMVLDASKYLRS 228

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +   ++ M G+  L D ++
Sbjct: 229 DIVFVGIILMGGIAILMDGII 249


>gi|325965216|ref|YP_004243122.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471303|gb|ADX74988.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 293

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 10/260 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           ++    L  +         +  +      + ++    +               +      
Sbjct: 26  RRKAGRLSYVAHQAARAGWKSLAVVLFLTLWEVGPLYLASASTRVFLPPLHEVLAAGARL 85

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   +      ++ R V    IA +  + +G+ I +   ++S + P  +L         
Sbjct: 86  VEAGQLQSHLQASLTRSVSGFGIAVVTAVALGLLIAWYGWLNSFLNPLLELFRNTATLAL 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    +     +       ++ +   + +L N IAG           A S  +  +R 
Sbjct: 146 LPVFTLLLGIGEESK----ITIVAYAAFFPVLLNTIAGVRTVDPLLIRAAKSLGLNSFRL 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           ++ +ILP   P   TG   A   +    I +E+           GLG  I  S      P
Sbjct: 202 FQKVILPSAVPTIFTGIRMAGTSSILVLIAAEMVG------AKAGLGYLIVNSQMSFLIP 255

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++  G+L +    LA+N  L
Sbjct: 256 DMYAGILTVSVLGLAVNALL 275



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L  +   +  R +S   I+++       L A    L   L P+L++ ++   L  L
Sbjct: 87  EAGQLQSHLQASLTRSVSGFGIAVVTAVALGLLIAWYGWLNSFLNPLLELFRNTATLALL 146

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +             E + I  +  +  + +  +    +  +   L   ++S  L+ 
Sbjct: 147 PVFTLLLGIG--------EESKITIVAYAAFFPVLLNTIAGVRTVDPLLIRAAKSLGLNS 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           ++ F  + +P ++P +   + M+ +     ++A+EM+          G+G  I  +    
Sbjct: 199 FRLFQKVILPSAVPTIFTGIRMAGTSSILVLIAAEMVGAKA------GLGYLIVNSQMSF 252

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +   +LT+  +    + LL
Sbjct: 253 LIPDMYAGILTVSVLGLAVNALL 275


>gi|95928883|ref|ZP_01311629.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
 gi|95135228|gb|EAT16881.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
          Length = 269

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 11/231 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +W  V         W+ +  +         +Y+  L   +M R +    IA      +G+
Sbjct: 36  WWRGVSFPTPFETGWKLVKMLAGEPLLGYSIYLHTLS--SMGRWLGGFSIAVFSGALIGM 93

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
             G          P  Q+L   P   + P+ +                ++       I  
Sbjct: 94  AAGRWRTFERLTMPSVQVLQLIPGLAWIPVAILLFGIGDG----ATLFMIAVTAFAPIAI 149

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV  G       +   A    +     +R ++LPG  P+ ++G     G +W   + +E+
Sbjct: 150 NVAGGVKRVDEMYIRAARMLGLNNRMLFRSVLLPGALPHILSGLRVGLGSSWRVLVAAEM 209

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                   R TGLG  I +S     F +  + + I+C   L + R ++ PL
Sbjct: 210 VVG-----RGTGLGYAIIQSRWTLDFAKAFVCIAIICGIGLIMERVIFIPL 255



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 80/200 (40%), Gaps = 13/200 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R L    I++    +    A + R    + +P + ++Q IP L ++   ++ F
Sbjct: 69  HTLSSMGRWLGGFSIAVFSGALIGMAAGRWRTFERLTMPSVQVLQLIPGLAWIPVAILLF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        A +F I  +    +  ++   +  +       +R   L+    F  +
Sbjct: 129 GIGDG--------ATLFMIAVTAFAPIAINVAGGVKRVDEMYIRAARMLGLNNRMLFRSV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + + +   W  +VA+EM+V   T     G+G  I  +    D      
Sbjct: 181 LLPGALPHILSGLRVGLGSSWRVLVAAEMVVGRGT-----GLGYAIIQSRWTLDFAKAFV 235

Query: 244 AMLTMLGVIFLYDQLLFRPM 263
            +  + G+  + ++++F P+
Sbjct: 236 CIAIICGIGLIMERVIFIPL 255


>gi|289628696|ref|ZP_06461650.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650327|ref|ZP_06481670.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330866151|gb|EGH00860.1| sulfonate ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 285

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|34498311|ref|NP_902526.1| taurine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34104165|gb|AAQ60524.1| taurine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 282

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ + ++ A  + +P+G  +G  P     + P  +     P   + PL+V      
Sbjct: 89  ASLQRIALALVAAVAVGVPLGALMGRSPLAQGLLDPMLEAYRPVPPLAYLPLIVIWFGIG 148

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      LL+       +      G +    +    A S   +  +    ++LP   P
Sbjct: 149 ELSK----VLLIFLAILAPVAIATRHGVAQVGRNRLRAAQSLGASRSQLLWLVVLPEALP 204

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G  W+  + +E+ +       T GLG  +  + +      VVLG+L +  
Sbjct: 205 QILTGIRIGLGAGWSTLVAAELVA------ATRGLGFMVQSAAQFLVTDVVVLGILAIAA 258

Query: 565 FVLALN---RFLWHPLYLY 580
              AL    R L   L  +
Sbjct: 259 VAFALELGLRALQRRLAPW 277



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 90/212 (42%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +  R+  A+V ++        L  +S     +L P+L+  + +P L +L  
Sbjct: 81  ATLWQHLEASLQRIALALVAAVAVGVPLGALMGRSPLAQGLLDPMLEAYRPVPPLAYLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           EL+ +  IF + +  +  +    +  + R+    ++S   S  Q
Sbjct: 141 IVIWFGIG--------ELSKVLLIFLAILAPVAIATRHGVAQVGRNRLRAAQSLGASRSQ 192

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + + +  GW  +VA+E++          G+G  +  A +    
Sbjct: 193 LLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVA------ATRGLGFMVQSAAQFLVT 246

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             ++  +L +  V F  +   + L R +  W 
Sbjct: 247 DVVVLGILAIAAVAFALELGLRALQRRLAPWH 278


>gi|33597693|ref|NP_885336.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella parapertussis 12822]
 gi|33602539|ref|NP_890099.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella bronchiseptica RB50]
 gi|33574121|emb|CAE38448.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33576978|emb|CAE34058.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 275

 Score =  116 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 9/197 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M R++  + +A+ +   +GI IG         +P   L    P   + P+
Sbjct: 70  GQLYRHVYYSMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +       N    L++     + ++ NV+AG          VA S   +  + +  
Sbjct: 130 LLLLIGV----DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFK 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+PGI PY +TG     G AW A I +E+ +       + GLG  I E++E      + 
Sbjct: 186 VIVPGILPYLITGVRLGSGYAWRALIAAEMLA-----ASSYGLGFMIYEASEFMDMTTIY 240

Query: 557 LGVLIMCCFVLALNRFL 573
            G++++      +   L
Sbjct: 241 GGLIMIALLGYLIENVL 257



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 82/201 (40%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   + +R+L+ + ++     +   L   +R    V  P+L +   +P L +   
Sbjct: 70  GQLYRHVYYSMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPI 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++                 I  +F +  + +  ++   + N+   +  V+RS   S  Q
Sbjct: 130 LLLLIGVD--------NKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQ 181

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + VP  +P L+  + +     W  ++A+EM+          G+G  I  A +  D+
Sbjct: 182 IFFKVIVPGILPYLITGVRLGSGYAWRALIAAEMLAASSY-----GLGFMIYEASEFMDM 236

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I   ++ +  + +L + +L
Sbjct: 237 TTIYGGLIMIALLGYLIENVL 257


>gi|254472307|ref|ZP_05085707.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
 gi|211958590|gb|EEA93790.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
          Length = 289

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 97/233 (41%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V+++  I ++            ++      +    L + A +T   +L A+ IS++    
Sbjct: 56  VIILVCIGLITFAASRRWGLSAVMVAAMWFIGTLGLWEKAMQTVAILLVAVFISVIIGVP 115

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              ++A+S R   +L P+LD+MQ+IP   +L    + F           ++ AI A    
Sbjct: 116 LGVISARSNRFRALLNPVLDLMQTIPSFVYLIPAAMLFGLG--------KVPAILATVIY 167

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  +  ++ E SR+F  + WQ    + +P ++P ++  +  +M     
Sbjct: 168 AAPPLIRLTDLGIRYVDAEVVEASRAFGATRWQILKGVQIPLALPSIMQGINQTMMMALA 227

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI          G+G  + L ++  D    L   L ++ +  ++D++
Sbjct: 228 MVVIASMI-------GARGVGETVLLGLQRNDAGQGLLGGLAIVVLAVVFDRI 273



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 75/229 (32%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + I     +   A    W     +V    +   L +      T+  ++V + I+ II +P
Sbjct: 56  VIILVCIGLITFAASRRWGLSAVMVAAMWFIGTLGLWEKAMQTVAILLVAVFISVIIGVP 115

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+         + + P   L+   P+ V+                +   L  +      
Sbjct: 116 LGVISARSNRFRALLNPVLDLMQTIPSFVYLIPAAMLFGLG----KVPAILATVIYAAPP 171

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G      +  E + +F  T W+  + + +P   P  + G       A    ++
Sbjct: 172 LIRLTDLGIRYVDAEVVEASRAFGATRWQILKGVQIPLALPSIMQGINQTMMMALAMVVI 231

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           G+G  +    ++    + +LG L +    +  +R 
Sbjct: 232 ASMIG-------ARGVGETVLLGLQRNDAGQGLLGGLAIVVLAVVFDRI 273


>gi|332715855|ref|YP_004443321.1| putative aliphatic sulfonates transport permease ssuC
           [Agrobacterium sp. H13-3]
 gi|325062540|gb|ADY66230.1| putative aliphatic sulfonates transport permease protein ssuC
           [Agrobacterium sp. H13-3]
          Length = 289

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 102/268 (38%), Gaps = 17/268 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F+ R         +  +L++     +         P   +    + L    L    + +T
Sbjct: 31  FLGRFDLRGAIVPVGSLLLLEFFVRVGWVSPYVLPPPSELYDTFLRLAEGPLWTNVAAST 90

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+    VI  L   V  +L          L P    ++++P L ++   +++F      
Sbjct: 91  ARVFVGFVIGSLLAIVVGSLVGLVVAAERYLEPTFQALRAVPSLAWVPLLMIWFGIG--- 147

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E + I  I  S  + +  +++  + N+ R L EV   +R       W + +P S+
Sbjct: 148 -----ETSKIVLIAKSAFFPVYLNLFSGIRNVDRKLVEVGEMYRQPLPVLVWRIFIPASL 202

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L   +   +S  W  VVA+E++   +      GIG  ++   +      ++ A++ + 
Sbjct: 203 PHLFTGLRYGLSLAWLSVVAAELLAASE------GIGYMLSDGRELSRPDLVMIAIICLA 256

Query: 250 GVIFLYDQL---LFRPMIVWSNKFRLER 274
            +  + D L   +    + W + + L++
Sbjct: 257 VLGKISDSLFKIVEERCLRWRDTYPLQQ 284



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 86/250 (34%), Gaps = 17/250 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           RF      + + S   + + + + W            + +   +     + +V       
Sbjct: 34  RFDLRGAIVPVGSLLLLEFFVRVGWVSPYVLPPPSELYDTFLRLAEGPLWTNV------- 86

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV V  +I S++ I VG  +G        ++P  Q L A P+  + PL++     
Sbjct: 87  AASTARVFVGFVIGSLLAIVVGSLVGLVVAAERYLEPTFQALRAVPSLAWVPLLMIWFGI 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L+     + +  N+ +G         EV   +          I +P   
Sbjct: 147 GETSK----IVLIAKSAFFPVYLNLFSGIRNVDRKLVEVGEMYRQPLPVLVWRIFIPASL 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  TG       AW + + +E+ +       + G+G  +++  E      V++ ++ + 
Sbjct: 203 PHLFTGLRYGLSLAWLSVVAAELLA------ASEGIGYMLSDGRELSRPDLVMIAIICLA 256

Query: 564 CFVLALNRFL 573
                 +   
Sbjct: 257 VLGKISDSLF 266


>gi|227823101|ref|YP_002827073.1| putative ABC transporter, permease protein; putative aliphatic
           sulfonates transporter [Sinorhizobium fredii NGR234]
 gi|227342102|gb|ACP26320.1| putative ABC transporter, permease protein; putative aliphatic
           sulfonates transporter [Sinorhizobium fredii NGR234]
          Length = 278

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 17/262 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R      + +P    +    + +   +      ++  +     W S   +         L
Sbjct: 10  RPSPRRSWVWPALSARHIRLKGILPFVVPILLVLIWQMFSSAGWISTRIMPAPTDVAGAL 69

Query: 378 Y-------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   ++    ++  R +  +++   I + +GI  G             Q+L   P 
Sbjct: 70  VDQLLSGALVHNVAVSGARALAGLVVGGTIGLALGIANGISKLSEQLTDTSLQMLRTIPH 129

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PLV+        +       L   G  + I  N   G      +  E+   + + G
Sbjct: 130 LAMIPLVILWFGIGEESK----LFLTSLGVLFPIYLNTFHGVRNVDRELIEMGRIYGMNG 185

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +R +ILPG  P    G   A G  W   IVSE  +       ++G+G    ++ E  
Sbjct: 186 WTLFRKVILPGALPSIFVGLRYALGIMWLTLIVSESIA------ASSGIGHMANQAREFM 239

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
               VVL +LI        +  
Sbjct: 240 MTDVVVLSLLIYAALGKLADVI 261



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 92/237 (38%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  VL+  + +       +    P D+   +   L   +L    + +  R L+ +V+   
Sbjct: 39  ILLVLIWQMFSSAGWISTRIMPAPTDVAGALVDQLLSGALVHNVAVSGARALAGLVVGGT 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+    +    L ++++IP L  +   +++F           E + +F 
Sbjct: 99  IGLALGIANGISKLSEQLTDTSLQMLRTIPHLAMIPLVILWFGIG--------EESKLFL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                ++ +  + +  + N+ R+L E+ R + ++GW  F  + +P ++P +   +  ++ 
Sbjct: 151 TSLGVLFPIYLNTFHGVRNVDRELIEMGRIYGMNGWTLFRKVILPGALPSIFVGLRYALG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W  ++ SE I          GIG     A +      ++ ++L    +  L D +
Sbjct: 211 IMWLTLIVSESIAASS------GIGHMANQAREFMMTDVVVLSLLIYAALGKLADVI 261


>gi|229587925|ref|YP_002870044.1| putative histidine ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359791|emb|CAY46641.1| putative histidine ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 283

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   M+ A VIS+L     
Sbjct: 54  LMLAIVGAVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 85/245 (34%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   +AW +   +V       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRAAPWWLMLAIVGAVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|170693842|ref|ZP_02884999.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141260|gb|EDT09431.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 287

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 91/273 (33%), Gaps = 22/273 (8%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           V +    L  IR  +           + +  + + W      V +      +G+I     
Sbjct: 5   VSRRMADLTSIRNSYVAAQPSRVGVSQATLYIWLSWIIPAVVVLLWETAARVGFIAPQVL 64

Query: 373 YQDV------------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                             +     +++ R     +I   + + +G+ +GF P   + +  
Sbjct: 65  PAPSSVLETAVNLARNGDLFVHLGVSLLRAAGGFVIGGTLGLALGVIVGFSPLAQALLDR 124

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             Q++ A P     PLV+           +    L+     + I  N + G         
Sbjct: 125 SVQMVRAVPFLAMLPLVIVWFGVG----EVAKIFLVALAVLFPIYINTMLGIRQIDPKLM 180

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E+     +      R IILPG  P  +TG   A   AW A +++E  +       T G+G
Sbjct: 181 ELGRVVGLERAAIVRRIILPGAMPSILTGVRYALAHAWLALVIAETLA------TTKGIG 234

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               ++ E  +   ++L ++I     +  +  +
Sbjct: 235 FLAMDAREFLNTNVIILTMIIYAIIGVVADALV 267



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 83/232 (35%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L  +   + LR     VI          +   S     +L 
Sbjct: 64  LPAPSSVLETAVNLARNGDLFVHLGVSLLRAAGGFVIGGTLGLALGVIVGFSPLAQALLD 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  L   +V+F           E+A IF +  + ++ +  +    +  I
Sbjct: 124 RSVQMVRAVPFLAMLPLVIVWFGVG--------EVAKIFLVALAVLFPIYINTMLGIRQI 175

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R   L        + +P +MP ++  +  +++  W  +V +E +        
Sbjct: 176 DPKLMELGRVVGLERAAIVRRIILPGAMPSILTGVRYALAHAWLALVIAETLA------T 229

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
             GIG     A +  +   I+  M+    +  + D   +LL    + W   +
Sbjct: 230 TKGIGFLAMDAREFLNTNVIILTMIIYAIIGVVADALVRLLEGRFLSWHANY 281


>gi|217324236|ref|ZP_03440320.1| taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. TW14588]
 gi|217320457|gb|EEC28881.1| taurine transport system permease protein TauC [Escherichia coli
           O157:H7 str. TW14588]
          Length = 224

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 30  AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 89

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 90  GETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 145

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 146 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 199

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 200 IIAFLLELGLRALQRRLTPW 219



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 92/218 (42%), Gaps = 17/218 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+ + +  R++ A++ ++L           S  +  +L PI+++ + +P 
Sbjct: 17  PQGFMDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPP 76

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F           E + I  I+ +    +  S    + +  +     ++S 
Sbjct: 77  LAYLPLMVIWFGIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSL 128

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q  W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 129 GASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 182

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +      +L  +  +  + FL +   + L R +  W 
Sbjct: 183 GEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWH 220


>gi|317133321|ref|YP_004092635.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315471300|gb|ADU27904.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 263

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 16/243 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              +    +V  + +    +   Y+VN F    +   I    I+ +R+ +  ++A II +
Sbjct: 31  WTILAGSGLVSNIFLPSPLKVFAYLVNAFATGSIWGDIG---ISSYRIFMGFLVAVIIGV 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI  G      + IQPF++ L   P   F PL++                ++  GT +
Sbjct: 88  PLGILAGTFHFAEALIQPFSEFLRYMPVPAFVPLIMVWCGIGET----AKIAVIFLGTLF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++  +     A P+D    A +         R +ILP I P  +       G AW    
Sbjct: 144 QLIPMMADNVRAVPDDLLGAAYTLGGGRSLVLRRVILPAIAPSTMNTLRIMLGWAWTYLT 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYL 579
           V+E+ +        +GLG  I ++        +  G+LI+    L  +R        L+ 
Sbjct: 204 VAELVA------ANSGLGYNILKAQRFLRTDAIFGGILIIGVLGLLCDRAFVLAGKKLFP 257

Query: 580 YGT 582
           +  
Sbjct: 258 WAE 260



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 88/249 (35%), Gaps = 17/249 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F++   +    L        P  +   +       S+      ++ R+    +++++ 
Sbjct: 26  VVFLVWTILAGSGLVSNIFLPSPLKVFAYLVNAFATGSIWGDIGISSYRIFMGFLVAVII 85

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LA        ++ P  + ++ +P+  F+   +V+            E A I  I
Sbjct: 86  GVPLGILAGTFHFAEALIQPFSEFLRYMPVPAFVPLIMVWCGIG--------ETAKIAVI 137

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   ++ +   M  ++  +P DL   + +           + +P   P  +  + + +  
Sbjct: 138 FLGTLFQLIPMMADNVRAVPDDLLGAAYTLGGGRSLVLRRVILPAIAPSTMNTLRIMLGW 197

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LL 259
            W ++  +E++          G+G  I  A +     AI   +L +  +  L D+   L 
Sbjct: 198 AWTYLTVAELVAANS------GLGYNILKAQRFLRTDAIFGGILIIGVLGLLCDRAFVLA 251

Query: 260 FRPMIVWSN 268
            + +  W+ 
Sbjct: 252 GKKLFPWAE 260


>gi|148265900|ref|YP_001232606.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
 gi|146399400|gb|ABQ28033.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 92/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           +  ++   I+           +P  IV      L     L  +   +  R+ +  +I  L
Sbjct: 20  VLLLIAWEIVTRKELFSSLLLIPPQIVAQTFKDLIASGELINHLLASFARVFAGFLIGSL 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       S+R+   + P    ++ +P+  +    V++F      KV+   +A  + 
Sbjct: 80  AGILLGAALGLSKRIEEYIGPTFHTVRQVPLYAWFPMLVLWFGIGEKSKVLFIAVAPFYI 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   M     + +  +PR+  EV + F            +P ++P +   + +S+S
Sbjct: 140 --------MALYTLEGIRGVPREYLEVGKVFEYGRLGLLRKFVLPSALPSIATGLRISLS 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  VV +E++          GIG  +    +      +   ++T+  + F+ D    L
Sbjct: 192 FAWMAVVGAEILAASV------GIGYMMNWGRQIFQNDIVFVGIITVGILGFIMDYLAGL 245

Query: 259 LFRPMIVWSNKFR 271
           +    + W + +R
Sbjct: 246 VEAYFLRWRSSYR 258



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 10/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV    +I S+  I +G  +G    I   I P    +   P   +FP++V     
Sbjct: 64  LASFARVFAGFLIGSLAGILLGAALGLSKRIEEYIGPTFHTVRQVPLYAWFPMLVLWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      L +     + +    + G    P ++ EV   F        R  +LP   
Sbjct: 124 GEKSK----VLFIAVAPFYIMALYTLEGIRGVPREYLEVGKVFEYGRLGLLRKFVLPSAL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   +   AW A + +E+ +       + G+G  +    +      V +G++ + 
Sbjct: 180 PSIATGLRISLSFAWMAVVGAEILA------ASVGIGYMMNWGRQIFQNDIVFVGIITVG 233

Query: 564 CFVLALNRF 572
                ++  
Sbjct: 234 ILGFIMDYL 242


>gi|107101741|ref|ZP_01365659.1| hypothetical protein PaerPA_01002785 [Pseudomonas aeruginosa PACS2]
          Length = 265

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-------YIVNHFTYQDVLY 378
             P +     + +  S    + ++ +  G+ + +   +          ++          
Sbjct: 3   SLPISRPWRWATRAASLAACLAFWQLAAGLQLNLGLATFANVPTPGAVLLAACNLAQSSV 62

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV    ++A+ + I +G+ IG      + + P  ++L   PA  + PL +
Sbjct: 63  ILAHLGASLARVFAGYLLAAALGIALGLAIGRSAWAEALLLPPLEVLRPIPAVAWIPLAI 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    +  +   G  + IL N + G  A        A S         R ++
Sbjct: 123 LMFPSSEAS----MIFITFTGALFPILLNTVHGVEALDPRLLASARSLGAGRRALLREVL 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P   TG     G +W   + +E+ S         GLG Y   S    ++ EVV+G
Sbjct: 179 LPGAGPGIFTGLAIGMGTSWFCLVTAEMISGQW------GLGYYTWASYNIQNYDEVVVG 232

Query: 559 VLIMCCFVLALNRFLWH 575
           +L++  F +  +  +  
Sbjct: 233 MLLIGLFGMGSSGLVKR 249



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+ L        P  ++           +  +   +  R+ +  +++            
Sbjct: 34  LNLGLATFANVPTPGAVLLAACNLAQSSVILAHLGASLARVFAGYLLAAALGIALGLAIG 93

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S     +L+P L++++ IP + ++   ++ F          +E + IF  FT  ++ + 
Sbjct: 94  RSAWAEALLLPPLEVLRPIPAVAWIPLAILMF--------PSSEASMIFITFTGALFPIL 145

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   +RS           + +P + PG+   + + M   WF +V +E
Sbjct: 146 LNTVHGVEALDPRLLASARSLGAGRRALLREVLLPGAGPGIFTGLAIGMGTSWFCLVTAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          G+G Y   +   Q+   ++  ML +         L+ R
Sbjct: 206 MISG------QWGLGYYTWASYNIQNYDEVVVGMLLIGLFGMGSSGLVKR 249


>gi|153011208|ref|YP_001372422.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151563096|gb|ABS16593.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 301

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LLA   + G+  + L  +        I   + + L +H  L      +   +L++ VI++
Sbjct: 44  LLAVPPIGGVAILTLLALWRVGWKFAIFTALALGLIIHMELWTGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ P+LD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDTVASIVRPVLDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 74/224 (33%), Gaps = 11/224 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             +       + W+   +          + +      ++  V+   +IA +I IP+GI +
Sbjct: 54  AILTLLALWRVGWKFAIFTALALGLIIHMELWTGTMESLSLVLASTVIAVVIGIPLGIAM 113

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                ++S ++P   L+   PA V+            +   +   +         ++   
Sbjct: 114 ARSDTVASIVRPVLDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF----AMPPVVRLT 169

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G      +F E   +F  T  +    + LP   P  + G       + +  +++ +  
Sbjct: 170 NLGIRQVHAEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTIMLSLSMVVIASMIG 229

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 230 AG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|157148217|ref|YP_001455536.1| glycine betaine transporter membrane protein [Citrobacter koseri
           ATCC BAA-895]
 gi|157085422|gb|ABV15100.1| hypothetical protein CKO_04028 [Citrobacter koseri ATCC BAA-895]
          Length = 354

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + +   +  +V  I +        A  T   +L+A++  +
Sbjct: 101 LLGMPAPVAIIIFALIAWQISGLGMGVATLVSLIAIGAIGAWSQAMITLALVLTALLFCV 160

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 161 VIGLPLGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P           
Sbjct: 63  PLDSWV------TEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPV-------- 108

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + IF         +G+   ++  ++           +    IT+  V+  ++   +
Sbjct: 109 ---AIIIFALIAWQISGLGMGVATLVSLIAIGAIGAWSQAM----ITLALVLTALLFCVV 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPLGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323


>gi|41407207|ref|NP_960043.1| hypothetical protein MAP1109 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118464707|ref|YP_882581.1| ABC transporter permease [Mycobacterium avium 104]
 gi|41395558|gb|AAS03426.1| hypothetical protein MAP_1109 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118165994|gb|ABK66891.1| ABC transporter permease protein [Mycobacterium avium 104]
          Length = 286

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 23/254 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------- 380
           P    +  + +  S +L +       G+   +    +  ++   T   V  ++       
Sbjct: 19  PLARPRRGTLRWQSRVLRVVSVAAAIGLWQLLTADKVRLLLRFDTLPTVTEIVGALHRRL 78

Query: 381 -----WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                WL    ++ R++    +A++I +  G+ +G     +    P A+L    PA    
Sbjct: 79  AAGEYWLDLAQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMV 138

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ +             +  +      + I+ +      A P  +++   +     W+  
Sbjct: 139 PVAILLFP----TDEAGIVFITFLAAYFPIMVSTRHAVRALPTLWEDSVRTLGGGRWQVL 194

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LPGI P    G     G AW   I +E+ S         G+G    +     ++P+
Sbjct: 195 TQVVLPGILPGVFGGLSVGMGVAWICVISAEMISGR------LGVGYRTWQDYTVLAYPQ 248

Query: 555 VVLGVLIMCCFVLA 568
           V +G++ +     A
Sbjct: 249 VFVGIITIGVLGFA 262



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           LL          +IV  +   L         +++ LR+L+   ++ +       L  +SR
Sbjct: 57  LLLRFDTLPTVTEIVGALHRRLAAGEYWLDLAQSLLRILTGFGLAAVIGVATGVLLGRSR 116

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V  P+ ++ + IP +  +   ++ F           E   +F  F +  + +  S 
Sbjct: 117 LFADVFGPLAELARPIPAIAMVPVAILLF--------PTDEAGIVFITFLAAYFPIMVST 168

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +P   E+  R+     WQ    + +P  +PG+   + + M   W  V+++EMI 
Sbjct: 169 RHAVRALPTLWEDSVRTLGGGRWQVLTQVVLPGILPGVFGGLSVGMGVAWICVISAEMIS 228

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
                    G+G              +   ++T+  + F      +L+ R +  W  +
Sbjct: 229 G------RLGVGYRTWQDYTVLAYPQVFVGIITIGVLGFATSAAVELVGRRVTRWLPR 280


>gi|92114025|ref|YP_573953.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91797115|gb|ABE59254.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 276

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+       +  I L   +  +V   I  ++ + L  +  L      T   ++ A  +++
Sbjct: 47  LMWLPEWGLMAIIALICWRVASVRLAIGSVLGLALIWNLGLWDPMIETLTLVVIATFVAV 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +   AA S R   +++P+LD MQ++P   +L   + +F            ++AIF
Sbjct: 107 IIALPFGVFAALSDRFYSLIMPVLDFMQTMPAFVYLIPAIPFFGIG--------SVSAIF 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +          +  +P+DL E + +F  +  QK   + +P S+P ++  +  ++
Sbjct: 159 ATVIFSMPPAIRFTTLGIRQVPKDLIEAADAFGATRSQKLIKIQLPLSLPTIMAGINQTI 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+GS +  AI+         A + ++ +  L D++
Sbjct: 219 MLALSMVVIAAMI-------GADGLGSEVWRAIQRLRPGDGFEAGIAVVILAMLLDRI 269



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 72/232 (31%), Gaps = 13/232 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASII 400
            L  +    +  +           I +      +  +        T+  VV+   +A II
Sbjct: 49  WLPEWGLMAIIALICWRVASVRLAIGSVLGLALIWNLGLWDPMIETLTLVVIATFVAVII 108

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P G++        S I P    +   PA V+    +       ++      +     +
Sbjct: 109 ALPFGVFAALSDRFYSLIMPVLDFMQTMPAFVYLIPAIPFFGIGSVSAIFATVIF----S 164

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               +     G    P D  E A +F  T  +    I LP   P  + G       A + 
Sbjct: 165 MPPAIRFTTLGIRQVPKDLIEAADAFGATRSQKLIKIQLPLSLPTIMAGINQTIMLALSM 224

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++ +           GLG+ +  + ++    +     + +    + L+R 
Sbjct: 225 VVIAAMIG-------ADGLGSEVWRAIQRLRPGDGFEAGIAVVILAMLLDRI 269


>gi|50123330|ref|YP_052497.1| putative aliphatic sulfonates transport permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613856|emb|CAG77308.1| putative aliphatic sulfonates transport permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 264

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 106/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P +  +   V     +       +    P  ++      +    L Q+ + +  
Sbjct: 8   LAQRLAPFLLPITLLVAWQISVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHLAISGW 67

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L    I      V   +   SR    +L   + +++++P L  +   +++F       
Sbjct: 68  RALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + NI R L E++RS+ LSG   F+ + +P ++P
Sbjct: 124 ----EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALP 179

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 180 SIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYAL 233

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R  + W+  ++
Sbjct: 234 LGKLADVSAQGLERIWLRWNPAYQ 257



 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   I + +G   G        +    Q++   P     PLV+     
Sbjct: 63  AISGWRALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + +  N   G         E+A S+ ++G   +  ++LPG  
Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239


>gi|311278367|ref|YP_003940598.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308747562|gb|ADO47314.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 354

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 158 FCVIIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 214

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 215 IIFA-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVN 269

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D+
Sbjct: 270 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATIGGVGIVILAIILDR 322

Query: 258 L 258
           L
Sbjct: 323 L 323



 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 98/293 (33%), Gaps = 32/293 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T+ + ++       F  +   V  +      +    P       +   
Sbjct: 63  PLDSWV------THGIDWVVMHFRPLFQGIRVPVDYILSAFQQLLLGMP-------APAA 109

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I W     G+ +          +        +       +T+  V+  ++   I
Sbjct: 110 IVLFALIAWQIGGAGMGVAT--------LASLFLIGAIGAWSQAMVTLALVLTALLFCVI 161

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++ I  
Sbjct: 162 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+   I G +  P D  E + SF  +  +    + LP   P  + G       A +
Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATIGGVGIVILAIILDRL 323


>gi|313902594|ref|ZP_07835994.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313467160|gb|EFR62674.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 344

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 92/246 (37%), Gaps = 25/246 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVIWLGC----------- 384
           RV ++    W  VV  +A+ + W+ +   G +   F        +               
Sbjct: 92  RVPWLDRERWLSVVSPIALLLIWELMVRAGMLDPRFFPPPSRIAVRFAAMVADGTLAQHL 151

Query: 385 -ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++     +I  + +G+ +G  P + + ++P    +   P     PL++     
Sbjct: 152 GISLLRVILGFAAGAIPAVILGLTMGLFPLVRAVLEPIVAAIYPIPKIALLPLLLMIFGV 211

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                  +  + +  G    +L N +AG       + +VA +F  +   ++R +  PG  
Sbjct: 212 GEA----FKVVTIALGCFTLVLVNTVAGVVNIERIYVDVARNFGASRLDFYRTVAWPGAL 267

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G     G +    + +E+          +GLG  I  S +      + +G+++M 
Sbjct: 268 PMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVWDMAAMFIGLVLMS 321

Query: 564 CFVLAL 569
            F  A 
Sbjct: 322 FFGYAF 327



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 18/267 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYA 65
             P++ R  + ++   +A +L+  ++        +    P  I       +   +L Q+ 
Sbjct: 92  RVPWLDRERWLSVVSPIALLLIWELMVRAGMLDPRFFPPPSRIAVRFAAMVADGTLAQHL 151

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             + LR++       +   +          +  VL PI+  +  IP +  L   ++ F  
Sbjct: 152 GISLLRVILGFAAGAIPAVILGLTMGLFPLVRAVLEPIVAAIYPIPKIALLPLLLMIFGV 211

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E   +  I       +  +    + NI R   +V+R+F  S    +  +  
Sbjct: 212 G--------EAFKVVTIALGCFTLVLVNTVAGVVNIERIYVDVARNFGASRLDFYRTVAW 263

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + + M      +VA+EMI          G+G  I  + +  D+ A+   +
Sbjct: 264 PGALPMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVWDMAAMFIGL 317

Query: 246 LTMLGVIFLYDQL---LFRPMIVWSNK 269
           + M    + +      L R ++ W  +
Sbjct: 318 VLMSFFGYAFTMALNELERLVLPWRPR 344


>gi|312958480|ref|ZP_07773000.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311287023|gb|EFQ65584.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 283

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   M+ A VIS+L     
Sbjct: 54  LMLAIVGAVAWHATRKVVTTTVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 85/245 (34%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   +AW +   +V       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRAAPWWLMLAIVGAVAWHATRKVVTTTVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|296394034|ref|YP_003658918.1| binding-protein-dependent transporter inner membrane component
           [Segniliparus rotundus DSM 44985]
 gi|296181181|gb|ADG98087.1| binding-protein-dependent transport systems inner membrane
           component [Segniliparus rotundus DSM 44985]
          Length = 291

 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R     ++A +  +P+G+ I + P ++    P  +L          P+ V  +   
Sbjct: 99  ASLLRAGAGFVLAVLAGVPLGLAIAWFPRVADSANPVLELFRNTAPLALLPVFVLVLGIG 158

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ +   + ++ N IAGA +      + A S      + +  ++LPG  P
Sbjct: 159 ETSK----ITLLFYSGIFPVVLNTIAGARSADPLLVKAARSLGFGHMQTFVKVVLPGAVP 214

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A        + +E+           GLG  I  +    + P++ +G+L +  
Sbjct: 215 AVFTGVRQAAASCVLVLVAAEMIG------ARAGLGYLITAAQSSFAIPDMYVGILTIAL 268

Query: 565 FVLALNRFL 573
             L LN  L
Sbjct: 269 VGLTLNAVL 277



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 17/226 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            +++      L    L ++   + LR  +  V+++L         A   R+     P+L+
Sbjct: 78  SEVLKAGGALLGNGQLVEHLQASLLRAGAGFVLAVLAGVPLGLAIAWFPRVADSANPVLE 137

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + ++   L  L   V+             E + I  +F S ++ +  +      +    L
Sbjct: 138 LFRNTAPLALLPVFVLVLGIG--------ETSKITLLFYSGIFPVVLNTIAGARSADPLL 189

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +RS      Q F  + +P ++P +   +  + +     +VA+EMI          G+
Sbjct: 190 VKAARSLGFGHMQTFVKVVLPGAVPAVFTGVRQAAASCVLVLVAAEMIG------ARAGL 243

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
           G  I  A     +  +   +LT+  V    +     L R    W  
Sbjct: 244 GYLITAAQSSFAIPDMYVGILTIALVGLTLNAVLVALERRASRWRE 289


>gi|326316351|ref|YP_004234023.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373187|gb|ADX45456.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 453

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  + V+G++     G          + +V +      + Q A  T   +L+++   LL
Sbjct: 172 TLGMIAVVGLLAWQFAGRALALGAVVSLLLVAM----LGIWQEAMVTLSLVLTSLAFCLL 227

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L A S R   +L P LD MQ+ P   +L   V+ F     G V G  +  +FA
Sbjct: 228 LGLPLGILLASSDRAQRLLRPALDAMQTTPAFVYLVPVVMLFG---IGNVPGVVVTIVFA 284

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +       L  +  DL E +R++  S  Q  W + +P +MP ++  +  ++ 
Sbjct: 285 -----LPPLVRLTNLGLRQVRPDLVEAARAYGASPLQMLWKVQLPLAMPSIMAGINQALM 339

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI VG       G+G  +   I   D+       L ++ +    D+L
Sbjct: 340 LSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAITLDRL 389



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 87/269 (32%), Gaps = 12/269 (4%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                L+  V+        +R         + S       L +     +          +
Sbjct: 133 WINQGLTWTVEHFRPAFQAVRAPVDATLAGVQSVLTGLPTLGMIAVVGLLAWQFAGRALA 192

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +G +V+      +L +     +T+  V+  +    ++ +P+GI +         ++P   
Sbjct: 193 LGAVVSLLLVA-MLGIWQEAMVTLSLVLTSLAFCLLLGLPLGILLASSDRAQRLLRPALD 251

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   PA V+   VV          N+   ++ I      ++     G      D  E A
Sbjct: 252 AMQTTPAFVYLVPVVMLFGIG----NVPGVVVTIVFALPPLVRLTNLGLRQVRPDLVEAA 307

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    + LP   P  + G   A   + +  +++ + + G       GLG  +
Sbjct: 308 RAYGASPLQMLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMV 360

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +       +G L +    + L+R 
Sbjct: 361 LRGIGRLDMGLATVGGLGIVLLAITLDRL 389


>gi|26986982|ref|NP_742407.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24981597|gb|AAN65871.1|AE016215_6 sulfonate ABC transporter, permease protein SsuC [Pseudomonas
           putida KT2440]
          Length = 265

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++          +  +A+   W S   +                  +  
Sbjct: 2   SRATSSNLTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKIADLAARGLERVWLRWHPAYQVARK 262



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 106/271 (39%), Gaps = 17/271 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P    +L   +    ++      +    P  +V      +    +  + + +  
Sbjct: 9   LTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGW 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI      V   +   S     +L   + +++++P L  +   +++F       
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 125 ----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 181 SILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
           +  + D   + L R  + W   +++ R  G 
Sbjct: 235 LGKIADLAARGLERVWLRWHPAYQVARKEGA 265


>gi|90422365|ref|YP_530735.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90104379|gb|ABD86416.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 255

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R+ + +++  +  + +G+ +G    +   I P        P +   PL
Sbjct: 55  GELLDNTLASLRRLALGMLLGGVPALLLGLAMGISRPLRVAIDPLISATYPIPKSAILPL 114

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+       L+      +++  G  + I+ N + G       + +V  +F  + W+ +R 
Sbjct: 115 VLLIFGLGELSK----VVMVALGAFYPIVINTMVGVVNLDRIYLDVGHNFRASRWQVFRT 170

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LPG  P  + G   A G       +SE+ +         G+G  I  + +  +   + 
Sbjct: 171 IALPGALPSIMAGIKLAAGMGLILIAISEMVA------SNDGIGFMIWNAWQVLTVDTMY 224

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L++       +  L
Sbjct: 225 VGLLVIAILGFVFSIVL 241



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  IV  + + +    L      +  R+   M++  +   +       SR L + + P
Sbjct: 39  PPPSSIVHQIGVLIASGELLDNTLASLRRLALGMLLGGVPALLLGLAMGISRPLRVAIDP 98

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++     IP    L   ++ F           EL+ +  +     + +  +    + N+ 
Sbjct: 99  LISATYPIPKSAILPLVLLIFGLG--------ELSKVVMVALGAFYPIVINTMVGVVNLD 150

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R   +V  +FR S WQ F  + +P ++P ++  + ++   G   +  SEM+   D     
Sbjct: 151 RIYLDVGHNFRASRWQVFRTIALPGALPSIMAGIKLAAGMGLILIAISEMVASND----- 205

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
            GIG  I  A +   +  +   +L +  + F++  +L    R +I W
Sbjct: 206 -GIGFMIWNAWQVLTVDTMYVGLLVIAILGFVFSIVLDEIERRLIPW 251


>gi|332968035|gb|EGK07122.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Desmospora sp. 8437]
          Length = 279

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 17/234 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            V ++ I  + L   + +     +V +  +      L + ++ T   +L+A +IS++   
Sbjct: 51  LVTIVLISALALWASRWSVALFTLVGLFLVA--NLGLWEKSTETLSLVLTASLISVILGI 108

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA+S+ +  +L P+LD MQ++P   +L   V +F     G V G   + IFA+  
Sbjct: 109 PLGIWAARSQTVRKILTPVLDFMQTMPAFVYLIPAVFFFAL---GAVPGVIASVIFAMP- 164

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +P DL E + +F  + WQK   + +P +   ++  +  ++    
Sbjct: 165 ----PTIRLTNLGIRQVPGDLIEAADAFGSTSWQKLVKVQLPLARTTIMAGVNQTIMLSL 220

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV S MI  G       G+G+ +  +I   ++       L ++ +  + D++
Sbjct: 221 SMVVISSMIGAG-------GLGAIVLQSISRLEVGTGFEGGLAIVIIAIVLDRI 267



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 12/228 (5%)

Query: 346 IFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           +    ++  +A+  + W    + +        L +      T+  V+   +I+ I+ IP+
Sbjct: 51  LVTIVLISALALWASRWSVALFTLVGLFLVANLGLWEKSTETLSLVLTASLISVILGIPL 110

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +   + P    +   PA V+    V   +   +   +   +          
Sbjct: 111 GIWAARSQTVRKILTPVLDFMQTMPAFVYLIPAVFFFALGAVPGVIASVIF----AMPPT 166

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P D  E A +F  T W+    + LP      + G       + +  ++S
Sbjct: 167 IRLTNLGIRQVPGDLIEAADAFGSTSWQKLVKVQLPLARTTIMAGVNQTIMLSLSMVVIS 226

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLGA + +S  +        G L +    + L+R 
Sbjct: 227 SMIGAG-------GLGAIVLQSISRLEVGTGFEGGLAIVIIAIVLDRI 267


>gi|307155016|ref|YP_003890400.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306985244|gb|ADN17125.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 286

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  ++ + +    L        P  ++    + L    L      +  R+L   + S +
Sbjct: 48  LIPLLIWVLLTYGKLVNPLFVPTPTQVIQQAIVVLSNGQLISDTLVSVSRILWGFLFSAI 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L    + +  +L PIL +M+ +P   F+   +++     P        A +  
Sbjct: 108 LGVPIGLLIGTFKTMEGLLEPILGLMRYMPAAAFIPLVILWVGLDEP--------AKVTI 159

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF    +        ++  +P DL +VS +   +    F+ +  P ++P ++  + ++++
Sbjct: 160 IFLGTFFYNVLMTADAVKFVPSDLIKVSYTLGATEKDIFFKVIFPATLPSIIDTLRINIA 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W FV+ +E+I          G+G  I +A +      I   ++ +  +    D    L
Sbjct: 220 SAWNFVIVAELIGANS------GLGYRILMAQRVLKTEEIFLGIILIGLIGLGIDWLFKL 273

Query: 259 LFRPMIVWS 267
           LFR ++ W+
Sbjct: 274 LFRWVVPWA 282



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    +++ R++   + ++I+ +P+G+ IG    +   ++P   L+   PA  F PL
Sbjct: 85  GQLISDTLVSVSRILWGFLFSAILGVPIGLLIGTFKTMEGLLEPILGLMRYMPAAAFIPL 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+  V             ++  GT +Y +          P+D  +V+ +   T    +  
Sbjct: 145 VILWVGL----DEPAKVTIIFLGTFFYNVLMTADAVKFVPSDLIKVSYTLGATEKDIFFK 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P  +         AWN  IV+E+          +GLG  I  +       E+ 
Sbjct: 201 VIFPATLPSIIDTLRINIASAWNFVIVAELIG------ANSGLGYRILMAQRVLKTEEIF 254


>gi|27376029|ref|NP_767558.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349168|dbj|BAC46183.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 335

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 20/269 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQY 64
           P  I+R   P +  LL   L +G   ++  G         P  +   +        L ++
Sbjct: 75  PSRIARYARPVLGVLLPLALALGWELVVWSGWSNGRLVPPPSRVFVTITDLARSGELVRH 134

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + T  R+       ++   +   ++        +L P +  +++IP L ++   +++  
Sbjct: 135 IAATLWRVGLGFAFGVVAGTLLGAISGYWSLARRLLDPTVQALRAIPSLAWVPLFILWLG 194

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + I  I     + +   +  ++ ++ R + EV R+FRLSG      + 
Sbjct: 195 IF--------ETSKIALIAVGVFFPVYLGVMGAILSVDRKIVEVGRTFRLSGPAMIRRIL 246

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +P  V ++ + +  GW FVVA+E+I   +      G+G  +    +      IL A
Sbjct: 247 LPAVLPAYVVSLRVGLGLGWMFVVAAELIGASE------GLGYLLLDGQQLGKPAQILAA 300

Query: 245 MLTMLGVIFLYDQLLF---RPMIVWSNKF 270
           ++    +  L D L+     P + W + F
Sbjct: 301 IVIFAMLGKLTDWLIEVGSAPFLRWQDGF 329



 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 103/326 (31%), Gaps = 27/326 (8%)

Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF--------IGYSSWNFFSPLSNNVK 314
           ++     FR+  TT      S +    R+    R         I        + +S+   
Sbjct: 2   VVARRRSFRIPVTTPPRGYGSRIGARLRRACPGRRSWVWRHCCIPSQDALAMAMISDAPA 61

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--- 371
               +        P    +    + V  +L      +   + +   W +   +       
Sbjct: 62  LQRSSEPAEGAAAPSRIARYA--RPVLGVLLPLALALGWELVVWSGWSNGRLVPPPSRVF 119

Query: 372 ----TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      ++     T++RV +      +    +G   G+       + P  Q L A
Sbjct: 120 VTITDLARSGELVRHIAATLWRVGLGFAFGVVAGTLLGAISGYWSLARRLLDPTVQALRA 179

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+  + PL +  +  +  +       L+  G  + +   V+    +      EV  +F 
Sbjct: 180 IPSLAWVPLFILWLGIFETSK----IALIAVGVFFPVYLGVMGAILSVDRKIVEVGRTFR 235

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++G    R I+LP + P YV       G  W   + +E+         + GLG  + +  
Sbjct: 236 LSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAAELIG------ASEGLGYLLLDGQ 289

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           + G   +++  ++I        +  +
Sbjct: 290 QLGKPAQILAAIVIFAMLGKLTDWLI 315


>gi|283786767|ref|YP_003366632.1| glycine betaine/L-proline ABC transporter permease [Citrobacter
           rodentium ICC168]
 gi|282950221|emb|CBG89857.1| glycine betaine/L-proline ABC transporter, permease protein
           [Citrobacter rodentium ICC168]
          Length = 353

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + II   L   Q + V   +  +V  I +        A  T   +L+A++  +
Sbjct: 100 LLGMPAPVAIIVFALLAWQISGVGMGVATLVSLIAIGAIGAWSQAMITLALVLTALLFCV 159

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 160 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 216

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++
Sbjct: 217 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 271

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 272 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 322



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L      V   V   +AWQ  G  +   T   ++ +  +G      IT+  V+  ++  
Sbjct: 99  LLLGMPAPVAIIVFALLAWQISGVGMGVATLVSLIAIGAIGAWSQAMITLALVLTALLFC 158

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I
Sbjct: 159 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 214

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+   I G +  P D  E + SF  +  +    + LP   P  + G       A
Sbjct: 215 IFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 274

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 275 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 322


>gi|256393447|ref|YP_003115011.1| ABC transporter permease [Catenulispora acidiphila DSM 44928]
 gi|256359673|gb|ACU73170.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 278

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R +   +IA  + +P+G+ IG+   ++  + P  +L     A    P+ +  +   
Sbjct: 84  ASLVRSLSGFLIAIGVGVPLGLLIGWYRPVAEILGPLLELFRNTAALALLPVFILLLGIG 143

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++++   W IL N I+G  +      + A S  +   R +  +ILP   P
Sbjct: 144 ETSK----IAIVVYACTWPILLNTISGVRSVDPVLIKSARSMALPPHRLFAKVILPAALP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    + +E+           GLG  +  S +  + P++   ++ +  
Sbjct: 200 TVFTGIRLAGASSILVLVAAEMVG------AKAGLGYLVNASQQNFAIPDMYAAIIAIAV 253

Query: 565 FVLALNRFL 573
             L  N  L
Sbjct: 254 VGLVFNHLL 262



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 97/249 (38%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-VHSLPQYASRTTLRMLSAMVISL 80
           ++AF+ +  I   +    +   VP        I L     L      + +R LS  +I++
Sbjct: 38  IVAFLALWEIAPRVGLVDRTFLVPFSEAVKALIELAKDGQLWDNTRASLVRSLSGFLIAI 97

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L    R +  +L P+L++ ++   L  L   ++             E + I 
Sbjct: 98  GVGVPLGLLIGWYRPVAEILGPLLELFRNTAALALLPVFILLLGIG--------ETSKIA 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  +  W +  +    + ++   L + +RS  L   + F  + +P ++P +   + ++ 
Sbjct: 150 IVVYACTWPILLNTISGVRSVDPVLIKSARSMALPPHRLFAKVILPAALPTVFTGIRLAG 209

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
           +     +VA+EM+          G+G  +  + +   +  +  A++ +  V  +++    
Sbjct: 210 ASSILVLVAAEMVGAKA------GLGYLVNASQQNFAIPDMYAAIIAIAVVGLVFNHLLV 263

Query: 258 LLFRPMIVW 266
           LL R +  W
Sbjct: 264 LLERRLTRW 272


>gi|3420607|gb|AAC31906.1| ABC transporter membrane subunit [Pseudomonas putida]
          Length = 265

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++             +A+   W S   +                  +  
Sbjct: 2   SRATSSTLTQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFLIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVAKK 262



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 105/274 (38%), Gaps = 17/274 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
              +++R+ P    +L        ++      +    P  +V      +    +  + + 
Sbjct: 6   SSTLTQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAI 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R     +I      V   +   S     +L   + +++++P L  +   +++F    
Sbjct: 66  SGWRAGLGFLIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID- 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P 
Sbjct: 125 -------ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++   W  ++ +E I          GIG     A +      ++ A++ 
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVL 231

Query: 248 MLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
              +  L D   + L R  + W   +++ +  G 
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVAKKEGA 265


>gi|326789555|ref|YP_004307376.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540319|gb|ADZ82178.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 258

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I+++R+ +  + A I+ +P+GI  G      + ++P ++ +   P   F PL++  + 
Sbjct: 67  MGISVYRITLGFVFAVILGVPLGILAGTFKKAEAIVRPLSEFIRYMPVPAFVPLIMVWIG 126

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       ++  GT + ++  +     + P+D    + +      +    I++P +
Sbjct: 127 IGEA----AKVAIIFIGTFFQLVLMIADDVKSVPDDLINASYTLGANTNKTIFTILIPAM 182

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   + +E+ +        +GLG  I +S        +  G++++
Sbjct: 183 LPRMMETLRMMIGWAWTYLVSAELVA------ANSGLGYTILKSQRFIKTDAIFGGIIVI 236

Query: 563 CCFVLALNRFL 573
               L  +R  
Sbjct: 237 GLLGLITDRLF 247



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 102/244 (41%), Gaps = 18/244 (7%)

Query: 20  FDLLAFVLVIGIINILLH----GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           F + +F+ VI + +IL +    G      P  ++D +  ++   SL      +  R+   
Sbjct: 18  FAIASFIFVIALWSILSYSGLVGSILLPTPTKVIDYIISSIADGSLWANMGISVYRITLG 77

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            V +++       LA   ++   ++ P+ + ++ +P+  F+   +V+            E
Sbjct: 78  FVFAVILGVPLGILAGTFKKAEAIVRPLSEFIRYMPVPAFVPLIMVWIGIG--------E 129

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A +  IF    + +   +   + ++P DL   S +   +  +  + + +P  +P ++  
Sbjct: 130 AAKVAIIFIGTFFQLVLMIADDVKSVPDDLINASYTLGANTNKTIFTILIPAMLPRMMET 189

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + M +   W ++V++E++          G+G  I  + +     AI   ++ +  +  + 
Sbjct: 190 LRMMIGWAWTYLVSAELVAANS------GLGYTILKSQRFIKTDAIFGGIIVIGLLGLIT 243

Query: 256 DQLL 259
           D+L 
Sbjct: 244 DRLF 247


>gi|296104355|ref|YP_003614501.1| glycine betaine/proline transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058814|gb|ADF63552.1| glycine betaine/proline transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 354

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 158 FCIVIGLPTGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 214

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 215 IIFA-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVN 269

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D+
Sbjct: 270 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDR 322

Query: 258 L 258
           L
Sbjct: 323 L 323



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              IT+  V+  ++   +I +P GIW+   P  +  ++P    +   PA V+   +V   
Sbjct: 144 QAMITLALVLTALLFCIVIGLPTGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLF 203

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  N+   ++ I      I+   I G +  P D  E + SF  +  +    + LP 
Sbjct: 204 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 259

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G       A +  +++ + + G       GLG  +     +       +G + 
Sbjct: 260 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVG 312

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 313 IVILAIILDRL 323


>gi|294498309|ref|YP_003562009.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           QM B1551]
 gi|294348246|gb|ADE68575.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium QM B1551]
          Length = 287

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +L++ +ISLLF      L+ +  ++G V+ PILDIMQ++P   +L  +
Sbjct: 89  NLWEASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPS 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + A+ A F   +          L  +P+   E + +F  + WQK
Sbjct: 149 VLLFGLG--------NVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQK 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +   +      VV S M+  G       G+G+ +  +I   D+ 
Sbjct: 201 LIKVQLPLALPMIMSGVNQVIMLSLSMVVISSMVGAG-------GLGAEVLRSISMLDVG 253

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 + ++ +  + D+L
Sbjct: 254 LGFIGGIAVVIIAVILDRL 272



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 11/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+  V+   II+ +  +P+GI       + + I+P   ++   PA V+    V    
Sbjct: 94  SMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPSVLLFG 153

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             ++   +   +  +       L     G    P    E A +F  T W+    + LP  
Sbjct: 154 LGNVTALIATFIFAMPPAVRLTLL----GLQQVPQTTLEAAEAFGATEWQKLIKVQLPLA 209

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++G       + +  ++S +   G       GLGA +  S          +G + +
Sbjct: 210 LPMIMSGVNQVIMLSLSMVVISSMVGAG-------GLGAEVLRSISMLDVGLGFIGGIAV 262

Query: 563 CCFVLALNRF 572
               + L+R 
Sbjct: 263 VIIAVILDRL 272


>gi|293396744|ref|ZP_06641020.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
 gi|291421008|gb|EFE94261.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
          Length = 264

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A V +      +          P  ++       +   L Q+ + ++ R      I   
Sbjct: 19  VALVALWQFSVDVGWLSNRILPAPSAVIGAFWSLTESGELWQHLTISSWRAFIGFSIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  LGLLLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI R L E++RS+ LSG++ F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 FMWLTLIVAETISANS------GIGYLAMNAREFLQTDIVVVAIVLYAVLGKLADLSAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 245 LERVWLRWHPAYQLKHGEA 263



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 82/239 (34%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           R++  +       +   ++ + W S   +           +  +   +     I+ +R  
Sbjct: 11  RLAPWVLPVALVALWQFSVDVGWLSNRILPAPSAVIGAFWSLTESGELWQHLTISSWRAF 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G   G        +    Q++   P     PLV+             
Sbjct: 71  IGFSIGGSLGLLLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+R +  ++LPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDIVVVAIVLYAVLGKLAD 239


>gi|257468378|ref|ZP_05632472.1| binding-protein-dependent transport systems inner membrane
           component [Fusobacterium ulcerans ATCC 49185]
 gi|317062651|ref|ZP_07927136.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185]
 gi|313688327|gb|EFS25162.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185]
          Length = 287

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 107/261 (40%), Gaps = 22/261 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRD---IVDIVPITLDVHSLPQYASRTTLRMLS 74
            I  +L F+    ++ ++     + T       +   +   + V  L    + T   +L+
Sbjct: 46  GILTILNFIPWWVLVLLVFFAGWKLTGKLRNGILYSCMLFFIGVIGLWDLMNDTLSIVLA 105

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ ISLL  F    L + + R+   + PILD MQ++P+  +L   V++F       VI  
Sbjct: 106 AVFISLLLGFPIGILISGNERINSFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIAT 165

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + AI  +               +  + +++ E +R+F  + +Q  W + +P ++P ++ 
Sbjct: 166 TIYAIVPVIRL--------TSHGIRQVDKEVVEAARAFGSTKFQALWKVQIPQALPTIMT 217

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++      VV   MI          G+G  + + +   ++   L A   ++ V  L
Sbjct: 218 GVNQTLMMAMAMVVTCSMI-------GASGLGMEVLIGVNRIEIGRGLVAGTAVVIVAIL 270

Query: 255 YDQLLFRPMIVWSNKFRLERT 275
            D    R    W N+  +++ 
Sbjct: 271 MD----RITQAWINRSEVKKK 287



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 17/239 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVL 393
           +  +L+   + V+  +     W+  G + N   Y  +L+ I +  +      T+  V+  
Sbjct: 47  ILTILNFIPWWVLVLLVFFAGWKLTGKLRNGILYSCMLFFIGVIGLWDLMNDTLSIVLAA 106

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++  P+GI I     I+S ++P    +   P  V+    V           +  +
Sbjct: 107 VFISLLLGFPIGILISGNERINSFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATT 166

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  I      ++     G      +  E A +F  T ++    + +P   P  +TG    
Sbjct: 167 IYAIV----PVIRLTSHGIRQVDKEVVEAARAFGSTKFQALWKVQIPQALPTIMTGVNQT 222

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              A    +   +          +GLG  +     +      ++    +    + ++R 
Sbjct: 223 LMMAMAMVVTCSMIG-------ASGLGMEVLIGVNRIEIGRGLVAGTAVVIVAILMDRI 274


>gi|154150279|ref|YP_001403897.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Methanoregula boonei 6A8]
 gi|153998831|gb|ABS55254.1| binding-protein-dependent transport systems inner membrane
           component [Methanoregula boonei 6A8]
          Length = 253

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 9/175 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +++ RVV+   +A+ + IP+GI +G    ++       +LL   P   + PL
Sbjct: 51  GSLVDNALVSIERVVLGFALAAAVAIPLGIGMGRFAVLNDFFDTTIELLRPVPPLAWVPL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++      ++    + +    G  + IL N + G     N + EV ++   +  +    
Sbjct: 111 ALAWFKIGIVSIVFIIFI----GAVFPILLNTVDGVRGVKNTWIEVCTTLGASERQILTK 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +ILPG  P   TG     G +W   + +E+         T+GLG  I  +   G 
Sbjct: 167 VILPGAAPTIWTGLRVGFGISWMCVVAAEILPG-----PTSGLGYLIMYAYNLGQ 216



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 73/210 (34%), Gaps = 13/210 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           ++      L   SL   A  +  R++    ++            +   L       ++++
Sbjct: 40  LLSPFSDILGTGSLVDNALVSIERVVLGFALAAAVAIPLGIGMGRFAVLNDFFDTTIELL 99

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P L ++   + +F       V    + A+F         +  +    +  +     E
Sbjct: 100 RPVPPLAWVPLALAWFKIGIVSIVFIIFIGAVF--------PILLNTVDGVRGVKNTWIE 151

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V  +   S  Q    + +P + P +   + +     W  VVA+E++       P  G+G 
Sbjct: 152 VCTTLGASERQILTKVILPGAAPTIWTGLRVGFGISWMCVVAAEILPG-----PTSGLGY 206

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            I  A     +  I+  ++ +  +  + DQ
Sbjct: 207 LIMYAYNLGQINVIIAGIIVIGLIGLVIDQ 236


>gi|325272391|ref|ZP_08138786.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324102468|gb|EGB99919.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 265

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 84/262 (32%), Gaps = 26/262 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIWLGCITMFRV 390
           QR++             +A+   W S   +                  +     I+ +R 
Sbjct: 11  QRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGDIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GLGFVIGGSIGLALGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DES 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S         G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240

Query: 571 R---------FLWHPLYLYGTR 583
                       WHP Y    +
Sbjct: 241 LAARGLERVWLRWHPAYQVAKK 262



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 102/265 (38%), Gaps = 17/265 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P    +L        ++      +    P  +V      +    +  + + +  
Sbjct: 9   LAQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGDIWTHLAISGW 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI          +   S     +L   + +++++P L  +   +++F       
Sbjct: 69  RAGLGFVIGGSIGLALGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 125 ----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 181 SILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 251 VIFLYD---QLLFRPMIVWSNKFRL 272
           +  L D   + L R  + W   +++
Sbjct: 235 LGKLADLAARGLERVWLRWHPAYQV 259


>gi|254562665|ref|YP_003069760.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254269943|emb|CAX25921.1| putative ABC transporter, permease [Methylobacterium extorquens
           DM4]
          Length = 285

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R+   + +A     P+G+ IG  P     +QP  QLL       + P+ V  
Sbjct: 90  RAAAPSLARIGQGLAVAFGFGAPLGLLIGSVPLAERILQPPFQLLRMISPLAWMPVAVLA 149

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
              +       +  L+     W ILF   AG       +  +A +           +I+P
Sbjct: 150 FPSWDG----AIVFLIAAAAIWPILFATAAGVKRVDPVWLAMARNLGAGRLAALCAVIVP 205

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            +    +TG   A G AW   + +E          T+GLG  I ++ +  S+  +   VL
Sbjct: 206 AVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAINDARDTLSYDRLAALVL 259

Query: 561 IMCCFVLALN 570
           ++     AL+
Sbjct: 260 LIGGIGYALD 269



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 14/206 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L      + A+ +  R+   + ++  F      L         +L P   +++ I  L +
Sbjct: 83  LTSGEAWRAAAPSLARIGQGLAVAFGFGAPLGLLIGSVPLAERILQPPFQLLRMISPLAW 142

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+ F           + A +F I  + +W + F+    +  +      ++R+    
Sbjct: 143 MPVAVLAF--------PSWDGAIVFLIAAAAIWPILFATAAGVKRVDPVWLAMARNLGAG 194

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + VP  +  ++  + +++   W  +V +E + V        G+G  I  A   
Sbjct: 195 RLAALCAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLGV------TSGLGYAINDARDT 248

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
                +   +L + G+ +  D  L R
Sbjct: 249 LSYDRLAALVLLIGGIGYALDTGLGR 274


>gi|13378312|gb|AAK18747.1| ProW-like protein [Enterobacter amnigenus]
          Length = 295

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q T++   +  +V  + +        A  T   +L+A+   +
Sbjct: 40  LLGMPAPIAIVLFSLIAWQITSLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTALFFCI 99

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 100 LIGLPLGIWLARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 157 A-----LPPIVRLTILGINQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 211

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 212 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 262



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 94/267 (35%), Gaps = 15/267 (5%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
              L  + + L + + V        F QL         + +F        ++G+   ++ 
Sbjct: 11  IGWLVLHFRPLFQGIRVPVDFILSGFQQLLLGMPAPIAIVLFSLIAWQITSLGMGVATLV 70

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V           +    +T+  V+  +    +I +P+GIW+    H +  I+P    +
Sbjct: 71  SLVAIGAIGAWSQAM----VTLALVLTALFFCILIGLPLGIWLARSKHAAKVIRPLLDAM 126

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA V+   +V          N+   ++ I      I+   I G +  P D  E A S
Sbjct: 127 QTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGINQVPEDLIEAAES 182

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  +  +    + LP   P  + G       A +  +++ + + G       GLG  +  
Sbjct: 183 FGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLR 235

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572
              +       +G + +    + L+R 
Sbjct: 236 GIGRLDMGLAAVGGVGIVILAIILDRL 262


>gi|254235306|ref|ZP_04928629.1| hypothetical protein PACG_01205 [Pseudomonas aeruginosa C3719]
 gi|126167237|gb|EAZ52748.1| hypothetical protein PACG_01205 [Pseudomonas aeruginosa C3719]
          Length = 265

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-------YIVNHFTYQDVLY 378
             P +     + +  S    + ++ +  G+ + +   +          ++          
Sbjct: 3   SLPISRPWRWATRAASLAACLAFWQLAAGLQLNLGLVTFANVPTPGAVLLAACNLAQSSV 62

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV    ++A+ + I +G+ IG      + + P  ++L   PA  + PL +
Sbjct: 63  LLTHLGASLARVFAGYLLAAALGIALGLAIGRSAWAEALLLPPLEVLRPIPAVAWIPLAI 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    +  +   G  + IL N + G  A        A S         R ++
Sbjct: 123 LMFPSSEAS----MIFITFTGALFPILLNTVHGVEALDPRLLASARSLGAGRRALLREVL 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P   TG     G +W   + +E+ S         GLG Y   S    ++ EVV+G
Sbjct: 179 LPGAGPGIFTGLAIGMGTSWFCLVTAEMISGQW------GLGYYTWASYNIQNYDEVVVG 232

Query: 559 VLIMCCFVLALNRFLWH 575
           +L++  F +  +  +  
Sbjct: 233 MLLIGLFGMGSSGLVKR 249



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+ L        P  ++           L  +   +  R+ +  +++            
Sbjct: 34  LNLGLVTFANVPTPGAVLLAACNLAQSSVLLTHLGASLARVFAGYLLAAALGIALGLAIG 93

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S     +L+P L++++ IP + ++   ++ F          +E + IF  FT  ++ + 
Sbjct: 94  RSAWAEALLLPPLEVLRPIPAVAWIPLAILMF--------PSSEASMIFITFTGALFPIL 145

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   +RS           + +P + PG+   + + M   WF +V +E
Sbjct: 146 LNTVHGVEALDPRLLASARSLGAGRRALLREVLLPGAGPGIFTGLAIGMGTSWFCLVTAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          G+G Y   +   Q+   ++  ML +         L+ R
Sbjct: 206 MISG------QWGLGYYTWASYNIQNYDEVVVGMLLIGLFGMGSSGLVKR 249


>gi|296125453|ref|YP_003632705.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296017269|gb|ADG70506.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 256

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 13/221 (5%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G  I          +   T   +L+ I    I++FRV+    +A I+ IP+   +G+  
Sbjct: 33  AGAVIASPADVFKSFIKEITNGKLLHHI---AISLFRVLSGFALAFIVSIPIAFLMGWYQ 89

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            I   I+P  Q L   PA  + PLVV                ++   T   ++  V  G 
Sbjct: 90  PIQLLIEPIIQFLRNIPALAYIPLVVVAQGVG----ESAKITVIFISTFLVMIITVYQGV 145

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                   + A          +  +++P   PY + G     G +    I +E+      
Sbjct: 146 KEVDPTLIKAARVLGAKDKDIFLKVVIPASVPYILVGMRLGLGASLTTLIAAEL------ 199

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG  I E++       V+LG++++    L LN  +
Sbjct: 200 TGSNAGLGQMIQEASLYFRMDIVMLGIILIGITGLVLNLIV 240



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 102/264 (38%), Gaps = 18/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +++       ++  +L+   ++    G      P D+       +    L  + + +
Sbjct: 5   PMGNKKYIFTALSIIIALLIWQFVSSSDAGAV-IASPADVFKSFIKEITNGKLLHHIAIS 63

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+LS   ++ + +   A L    + + +++ PI+  +++IP L ++   VV       
Sbjct: 64  LFRVLSGFALAFIVSIPIAFLMGWYQPIQLLIEPIIQFLRNIPALAYIPLVVVAQGVG-- 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E A I  IF S    M  ++YQ +  +   L + +R         F  + +P S
Sbjct: 122 ------ESAKITVIFISTFLVMIITVYQGVKEVDPTLIKAARVLGAKDKDIFLKVVIPAS 175

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  M + +      ++A+E+           G+G  I  A     +  ++  ++ +
Sbjct: 176 VPYILVGMRLGLGASLTTLIAAEL------TGSNAGLGQMIQEASLYFRMDIVMLGIILI 229

Query: 249 LGVIFLYDQ---LLFRPMIVWSNK 269
                + +    ++   + +W  K
Sbjct: 230 GITGLVLNLIVSIIENKLTIWQEK 253


>gi|302186133|ref|ZP_07262806.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 285

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 86/232 (37%), Gaps = 14/232 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++    I    Q  G + +     ++ + +W   +++ R +  + I   I +   +  G
Sbjct: 58  GLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW---VSLQRALSGLSIGVSIGVVAALVTG 114

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +    Q+L   P+    PL +                L++ GT + +  N+ 
Sbjct: 115 LSRRGEIVLDSPMQMLRTIPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLF 170

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +G         E A++  ++      ++ILPG  P +  G   + G +W A +  E  + 
Sbjct: 171 SGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQIN- 229

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
                 T G+G   +++ +      +V+ +LI     L ++  +   L  Y 
Sbjct: 230 -----TTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAII-RTLERYA 275



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R LS + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALSGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTF 282


>gi|115380392|ref|ZP_01467388.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
 gi|115362604|gb|EAU61843.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
          Length = 586

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG   ++ + ++        +    + +      Q    T + +L A  +SLL    
Sbjct: 358 LVLIGATALVTYALRRGLALAVAIVAGGLLIWDLGYWQPTMETLVLVLVATALSLLLGVP 417

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA+  R   VL  +LD+MQ+IP   +L  T++ F     G V G     +F +   
Sbjct: 418 LGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLMLFGL---GVVPGLLSTVVFVLPAP 474

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P+++ E   +F     Q    + +P++   ++  +  ++     
Sbjct: 475 -----IRLTYLGITSVPKEMIEAGEAFGARPLQLLVKIELPYARKAILEGVTQALMLSLS 529

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++  G       G+GS +  A+   D+     A L ++ +  L D++   P
Sbjct: 530 MVVIAALVGAG-------GLGSRVVRALNTVDIRQGFEAGLVIVILAILLDRMFKHP 579



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 95/284 (33%), Gaps = 25/284 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             +RFI          +S  V  L  +   +    P   + + +   V+Y L       V
Sbjct: 321 RVIRFITAHFTGELRAISRAVTWLLESSVNLLLRIPP-LVLIGATALVTYALRRGLALAV 379

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             VA G+    +GY                   T+  V+V   ++ ++ +P+GI    RP
Sbjct: 380 AIVAGGLLIWDLGYWQPTME-------------TLVLVLVATALSLLLGVPLGIVAARRP 426

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              + ++    L+   P  V+    +       +   L   + ++      I      G 
Sbjct: 427 RFYAVLRLLLDLMQTIPTFVYLIPTLMLFGLGVVPGLLSTVVFVLPA---PIRL-TYLGI 482

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           ++ P +  E   +F     +    I LP      + G   A   + +  +++ +   G  
Sbjct: 483 TSVPKEMIEAGEAFGARPLQLLVKIELPYARKAILEGVTQALMLSLSMVVIAALVGAG-- 540

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                GLG+ +  +       +     L++    + L+R   HP
Sbjct: 541 -----GLGSRVVRALNTVDIRQGFEAGLVIVILAILLDRMFKHP 579


>gi|319783050|ref|YP_004142526.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168938|gb|ADV12476.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 257

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 23/238 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CITMFRVVV 392
           +             AW ++G  VN     D L ++  G              IT++RV  
Sbjct: 14  VLGISFFVLFVAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDVLITIWRVFG 73

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++AS++ +P+GI +G    + + ++PF       PA+ F PL++       L      
Sbjct: 74  GFLLASVVAVPLGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELEK---- 129

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L++  G+ + I+  +         D  E A +   T       +I+P   P        
Sbjct: 130 LLVIFVGSVFQIVLIIAVKVGGTRRDLVEAAYTLGSTNSGIVNRVIMPANAPEIAETLRL 189

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             G AW   IV+E+         ++G+G  I  S  + +  +++ G++++    L  +
Sbjct: 190 VLGWAWTYVIVAELIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSD 241



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 15/199 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+    +++ +            + +   L P +   + +P   F+   +++     
Sbjct: 67  TIWRVFGGFLLASVVAVPLGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG- 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL  +  IF   V+ +   +   +    RDL E + +   +       + +P 
Sbjct: 126 -------ELEKLLVIFVGSVFQIVLIIAVKVGGTRRDLVEAAYTLGSTNSGIVNRVIMPA 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + + +   W +V+ +E+I          GIG  I  +        I++ ++ 
Sbjct: 179 NAPEIAETLRLVLGWAWTYVIVAELIGSSS------GIGYMIINSQSRLATGQIIFGIIV 232

Query: 248 MLGVIFLYDQLLFRPMIVW 266
           +  +  L D   F+    W
Sbjct: 233 IGLIGLLSD-FAFKAFNRW 250


>gi|254775846|ref|ZP_05217362.1| ABC transporter permease protein [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 282

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 23/254 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------- 380
           P    +  + +  S +L +       G+   +    +  ++   T   V  ++       
Sbjct: 15  PLARPRRGTLRWQSRVLRVVSVAAAIGLWQLLTADKVRLLLRFDTLPTVTEIVGALHRRL 74

Query: 381 -----WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                WL    ++ R++    +A++I +  G+ +G     +    P A+L    PA    
Sbjct: 75  AAGEYWLDLAQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMV 134

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ +             +  +      + I+ +      A P  +++   +     W+  
Sbjct: 135 PVAILLFP----TDEAGIVFITFLAAYFPIMVSTRHAVRALPTLWEDSVRTLGGGRWQVL 190

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LPGI P    G     G AW   I +E+ S         G+G    +     ++P+
Sbjct: 191 TQVVLPGILPGVFGGLSVGMGVAWICVISAEMISGRL------GVGYRTWQDYTVLAYPQ 244

Query: 555 VVLGVLIMCCFVLA 568
           V +G++ +     A
Sbjct: 245 VFVGIITIGVLGFA 258



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           LL          +IV  +   L         +++ LR+L+   ++ +       L  +SR
Sbjct: 53  LLLRFDTLPTVTEIVGALHRRLAAGEYWLDLAQSLLRILTGFGLAAVIGVATGVLLGRSR 112

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V  P+ ++ + IP +  +   ++ F           E   +F  F +  + +  S 
Sbjct: 113 LFADVFGPLAELARPIPAIAMVPVAILLF--------PTDEAGIVFITFLAAYFPIMVST 164

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +P   E+  R+     WQ    + +P  +PG+   + + M   W  V+++EMI 
Sbjct: 165 RHAVRALPTLWEDSVRTLGGGRWQVLTQVVLPGILPGVFGGLSVGMGVAWICVISAEMIS 224

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
                    G+G              +   ++T+  + F      +L+ R +  W  +
Sbjct: 225 G------RLGVGYRTWQDYTVLAYPQVFVGIITIGVLGFATSAAVELVGRRVTRWLPR 276


>gi|260177216|gb|ACX33939.1| hypothetical taurine transport system permease protein TauC
           [uncultured prokaryote AT5]
          Length = 274

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R++    +A  I IP+G+ +G    + +   P  +     P    + L+V  + 
Sbjct: 81  MAASLERILAGYFMACAIGIPLGLLMGLSTRVKAVFDPIVEFYRPLPPLALYTLLVMWLG 140

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +  + L L  +         + +  A +        A     T  + +R++ LP  
Sbjct: 141 IGDTSKIMLLFLAALPPLS----ISAMQAARSIDLRHVRAAQMLGATRAQLFRHVFLPSC 196

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG   + G  +   + SE+ +       T G+G  I ++++      V++G+ ++
Sbjct: 197 LPGICTGMRISLGFTYTVLVASEIVA------ATAGMGWMIWDASKFLLSDVVIMGLFVL 250

Query: 563 CCFVLALN 570
               +AL+
Sbjct: 251 GLTGVALD 258



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+ + +  R+L+   ++         L   S R+  V  PI++  + +P L   T  V
Sbjct: 77  LHQHMAASLERILAGYFMACAIGIPLGLLMGLSTRVKAVFDPIVEFYRPLPPLALYTLLV 136

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++   LAA+  +  S +        Q+  +I       ++    +  Q F
Sbjct: 137 MWLGIGDTSKIMLLFLAALPPLSISAM--------QAARSIDLRHVRAAQMLGATRAQLF 188

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P  +PG+   M +S+   +  +VASE++          G+G  I  A K      
Sbjct: 189 RHVFLPSCLPGICTGMRISLGFTYTVLVASEIVA------ATAGMGWMIWDASKFLLSDV 242

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++  +  +       D  +
Sbjct: 243 VIMGLFVLGLTGVALDWAI 261


>gi|312113171|ref|YP_004010767.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311218300|gb|ADP69668.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 264

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 95/245 (38%), Gaps = 17/245 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +   +    P  +       +   +L ++   +  R L  ++I     F    L    R 
Sbjct: 34  IVSQRVLPAPSQVAAAFWAAIRDGTLFEHVGISAQRALQGLMIGGGAGFFLGVLCGVLRP 93

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             +++   L +++++P L  +   +++F           E A IF +    ++ M  + Y
Sbjct: 94  AEVLIDSSLQMLRNVPHLAMIPLVIIWFGID--------EEAKIFLVAIGVMFPMYLNTY 145

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  + + L E+++ + L  +  F  + +P +M  ++  +  ++   W  ++ +E I  
Sbjct: 146 HGIRTVDKGLIEMAKVYGLGPFALFRRVILPGAMSSVMVGLRYALGIMWLTLIVAETISA 205

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRL 272
                   GIG     A +      ++  +L    +  L D L   L R ++ W   +++
Sbjct: 206 SS------GIGYMTMNAREFLQTDVVVLGILIYALLGKLADVLTRALERRLLSWHPAYQV 259

Query: 273 ERTTG 277
           +  T 
Sbjct: 260 KGRTA 264



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 83/263 (31%), Gaps = 15/263 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVI 380
           +R  +        +   +  +L + W        +          V    +  +    + 
Sbjct: 1   MRQGYLSRIGATLAPWALPVLLVVAWEIACNAGIVSQRVLPAPSQVAAAFWAAIRDGTLF 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I+  R +  ++I       +G+  G        I    Q+L   P     PLV+  
Sbjct: 61  EHVGISAQRALQGLMIGGGAGFFLGVLCGVLRPAEVLIDSSLQMLRNVPHLAMIPLVIIW 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L+  G  + +  N   G         E+A  + +  +  +R +ILP
Sbjct: 121 FGI----DEEAKIFLVAIGVMFPMYLNTYHGIRTVDKGLIEMAKVYGLGPFALFRRVILP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G     + G   A G  W   IV+E  S       ++G+G     + E      VVLG+L
Sbjct: 177 GAMSSVMVGLRYALGIMWLTLIVAETIS------ASSGIGYMTMNAREFLQTDVVVLGIL 230

Query: 561 IMCCFVLA---LNRFLWHPLYLY 580
           I          L R L   L  +
Sbjct: 231 IYALLGKLADVLTRALERRLLSW 253


>gi|227509013|ref|ZP_03939062.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191490|gb|EEI71557.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 237

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 89/225 (39%), Gaps = 11/225 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
            L + W   +  + I          ++        + +W     ++ R+ +    A +  
Sbjct: 2   WLLVTWHGRISSLIIPAPNAVWTSFIDLLQNGYKGHTLWQHLWASLQRLFIAYFAAVLFA 61

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+  G+   + +  +P    L   P   ++ +++  +   + +      +L+  G  
Sbjct: 62  IPLGLVSGYSRKVRAIFEPVITFLRPLPPLGYYTIIILWMGTGNTSK----IVLLFLGAF 117

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I  + +AG S    D+   A +     ++ + +++LP   P    G   A   A+  S
Sbjct: 118 SPIYVSCVAGVSRVKIDYLNRARTLGANQFQVFSHVVLPASLPDIFVGLRNAMSVAYATS 177

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + +E+ + G      +G+G  + ++++      V +G++IM    
Sbjct: 178 VAAEMVAAG------SGIGWLVLDASKYLRSDVVFVGIIIMGVTG 216



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 14/194 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L Q+   +  R+  A   ++LF      ++  SR++  +  P++  ++ +P LG+ T 
Sbjct: 37  HTLWQHLWASLQRLFIAYFAAVLFAIPLGLVSGYSRKVRAIFEPVITFLRPLPPLGYYTI 96

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++       K        I  +F      +  S    +  +  D    +R+   + +Q
Sbjct: 97  IILWMGTGNTSK--------IVLLFLGAFSPIYVSCVAGVSRVKIDYLNRARTLGANQFQ 148

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F ++ +P S+P +   +  +MS  +   VA+EM+  G       GIG  +  A K    
Sbjct: 149 VFSHVVLPASLPDIFVGLRNAMSVAYATSVAAEMVAAGS------GIGWLVLDASKYLRS 202

Query: 239 LAILYAMLTMLGVI 252
             +   ++ M    
Sbjct: 203 DVVFVGIIIMGVTG 216


>gi|302538374|ref|ZP_07290716.1| LOW QUALITY PROTEIN: glycine betaine ABC transport system permease
           [Streptomyces sp. C]
 gi|302447269|gb|EFL19085.1| LOW QUALITY PROTEIN: glycine betaine ABC transport system permease
           [Streptomyces sp. C]
          Length = 548

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 15/202 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  +L   A  T   +L A +++L F       AA+S R+   L P+LD MQ++P + +L
Sbjct: 30  DSVALWDEAMSTLALVLVATLVTLAFALPLGIWAARSDRVSAALRPVLDFMQTMPAMVYL 89

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F     G V G     +F++               +  +  +L E + +F  + 
Sbjct: 90  IPGIIFFGV---GVVPGIIATIVFSLPPG-----VRMTELGIRQVDTELVEAAEAFGTAP 141

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P ++  +   +  G   VV + M+  G            +  AI   
Sbjct: 142 RDTLVRVQLPLALPTIMAGVNQVIMLGLSMVVIAGMVGGGGLGGA-------VYRAIGSV 194

Query: 237 DLLAILYAMLTMLGVIFLYDQL 258
           D+     A L+++ +    D++
Sbjct: 195 DVGLGFEAGLSIVVLAMYLDRM 216



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 4/139 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V  ++     +P+GIW      +S+ ++P    +   PA V+    +       
Sbjct: 41  TLALVLVATLVTLAFALPLGIWAARSDRVSAALRPVLDFMQTMPAMVYLIPGIIFFGVGV 100

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +     +    +     G      +  E A +F          + LP   P 
Sbjct: 101 VPGIIATIVF----SLPPGVRMTELGIRQVDTELVEAAEAFGTAPRDTLVRVQLPLALPT 156

Query: 506 YVTGAITACGGAWNASIVS 524
            + G         +  +++
Sbjct: 157 IMAGVNQVIMLGLSMVVIA 175


>gi|294628454|ref|ZP_06707014.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. e14]
 gi|292831787|gb|EFF90136.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Streptomyces sp. e14]
          Length = 871

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI  +L   ++ +             +D   L   A  T   +L A +I+L+ +  
Sbjct: 49  LLLAGIFAVLAWWLRGSLAGVLTFVGFAF-IDSMELWPDAMVTLSLVLVATLIALVVSVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+S R+G V+ P+LD MQ++P + +L   +++F     G   G     IFA+   
Sbjct: 108 VGIWAARSDRVGAVVRPVLDFMQTLPAMIYLIPAILFFG---TGASAGIVATLIFALAPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++L E + +F  +       + +P ++P ++  +   +  G  
Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTNPRDTLLRVQLPLALPTVMAGVNQVIMLGLS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               + M+  G            +  AI + ++     A + ++ +    D++
Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 9/166 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIASIIWIPV 404
            ++ G+   +AW   G +    T+    ++  +       +T+  V+V  +IA ++ +PV
Sbjct: 49  LLLAGIFAVLAWWLRGSLAGVLTFVGFAFIDSMELWPDAMVTLSLVLVATLIALVVSVPV 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      + + ++P    +   PA ++    +           +   +  +       
Sbjct: 109 GIWAARSDRVGAVVRPVLDFMQTLPAMIYLIPAILFFGTGASAGIVATLIFALA----PG 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           +     G      +  E A +F          + LP   P  + G 
Sbjct: 165 VRMTELGIRQVDKELVEAAEAFGTNPRDTLLRVQLPLALPTVMAGV 210


>gi|323972218|gb|EGB67428.1| inner membrane transport system [Escherichia coli TA007]
          Length = 204

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 10  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 69

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 70  GENSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGAL 125

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 126 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 179

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 180 IIAFLLELGLRALQRRLTPW 199



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 92/212 (43%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R++ A++ +++           S  +  +L PI+++ + +P L +L  
Sbjct: 3   ATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPL 62

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E + I  I+ +    +  S    + ++ +     +RS   S  Q
Sbjct: 63  MVIWFGIG--------ENSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQ 114

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +    
Sbjct: 115 VLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 168

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             +L  +  +  + FL +   + L R +  W 
Sbjct: 169 DVVLAGIAVIAIIAFLLELGLRALQRRLTPWH 200


>gi|304397094|ref|ZP_07378973.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304355243|gb|EFM19611.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 263

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV           L Q+ + ++ R L    I      +   +   S+    +L 
Sbjct: 39  LPAPEKIVTTFWQLTASGELWQHLAISSWRALIGFSIGGSLGLLLGLITGTSKTGERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 99  TSLQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGLMWLTLIVAETISASS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277
             GIG     A +      ++ A++    +  L D    LL R  + W   ++L+    
Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAALLLERVWLRWHPAYQLKEENA 263



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 76/209 (36%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRALIGFSIGGSLGLLLGLITGTSKTGERLLDTSLQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++GW  +  +ILPG  
Sbjct: 123 ----DESAKIFLVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VV+ +++  
Sbjct: 179 PNIMVGVRFALGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583
                     L L R    WHP Y     
Sbjct: 233 LLGKLADVAALLLERVWLRWHPAYQLKEE 261


>gi|77456591|ref|YP_346096.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380594|gb|ABA72107.1| putative histidine ABC transport system, membrane protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 283

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 101/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+ ++        V   ++  +   +    L     +T   M+ A VIS+L     
Sbjct: 54  LMLAIVGVVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGVPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 85/245 (34%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +   +AW +   +V       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRAAPWWLMLAIVGVVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ +I +P+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMMVATVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|289624880|ref|ZP_06457834.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330869209|gb|EGH03918.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 283

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTVVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           +L +  + ++  +  GIAW +   IV       +L+++    +      T+  ++V  II
Sbjct: 46  LLRMAPWWLMLIIVGGIAWHATRKIVTTVVIVGLLFLVGAVGLWDKLMQTLALMLVATII 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+GI       + S + P   ++   P+ V+   V+           +      
Sbjct: 106 AVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG----KVPAIFAT 161

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      ++     G      +  E  ++F    W+    + LP   P  + G       
Sbjct: 162 VIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMM 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 222 ALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270


>gi|240140227|ref|YP_002964705.1| putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
 gi|240010202|gb|ACS41428.1| putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
          Length = 285

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 92/266 (34%), Gaps = 16/266 (6%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V         I   F  + L   +       L   WF     +A   A+ +       
Sbjct: 14  RAVAAPVPRRAGIGARFGASALDRLAPLLGLAGLLALWFAGGLVLASVPAYAAFAGFAPA 73

Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 + +I  G        ++ R+   + +A  +  P+G+ IG  P     +QP  QL
Sbjct: 74  PALASFVELIASGEAWRAAAPSLARIGQGLAVAFGLGAPLGLLIGSVPLAERILQPPFQL 133

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L       + P+ V     +    N  +  L+     W IL    AG       +  +A 
Sbjct: 134 LRMISPLAWMPVAVLAFPSW----NGAIVFLIAAAAIWPILLATAAGVKRVDPVWLAMAR 189

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +         R +I+P +    +TG   A G AW   + +E          T+GLG  I 
Sbjct: 190 NLGAGRLAALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAIN 243

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ +  S+  +   VL++     AL+
Sbjct: 244 DARDTLSYDRLAALVLLIGGIGYALD 269



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A+ +  R+   + ++         L         +L P   +++ I  L ++   V+
Sbjct: 89  WRAAAPSLARIGQGLAVAFGLGAPLGLLIGSVPLAERILQPPFQLLRMISPLAWMPVAVL 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F +           A +F I  + +W +  +    +  +      ++R+          
Sbjct: 149 AFPSWNG--------AIVFLIAAAAIWPILLATAAGVKRVDPVWLAMARNLGAGRLAALR 200

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP  +  ++  + +++   W  +V +E + V        G+G  I  A        +
Sbjct: 201 AVIVPAVLQDILTGLRLALGVAWIVLVPAEYLGV------TSGLGYAINDARDTLSYDRL 254

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
              +L + G+ +  D  L R
Sbjct: 255 AALVLLIGGIGYALDTGLGR 274


>gi|209520862|ref|ZP_03269604.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209498709|gb|EDZ98822.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 293

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +++A   SL+         A+++R+ +VL  +LD MQ++P   +L   
Sbjct: 82  GLWTQTVSTLALVIAATFFSLVIGVPLGIWGARNKRVELVLRSLLDFMQTMPAFVYLIPA 141

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F     G+V       +FA+       +       +  +  +L E  RSF  +  Q 
Sbjct: 142 VILFGL---GRVPAVIATVVFAMP-----PVVRLTTLGIRQVREELLEAGRSFGSTDLQL 193

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  ++      VV + MI  G       G+G Y+   I+  D+ 
Sbjct: 194 LWKIQLPNALPSIMAGVNQTIMMALSMVVIASMIGAG-------GLGEYVLSGIQRLDIG 246

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D+L
Sbjct: 247 IGFEGGLGVVLLAIVLDRL 265



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F  +  + + +A    G + + F    +L + ++G       T+  V+     +
Sbjct: 42  GLGAVPFTAMLVIFVALALWRRGIVFSVFVGIALLAIHYMGLWTQTVSTLALVIAATFFS 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW      +   ++     +   PA V+    V       +   +   +   
Sbjct: 102 LVIGVPLGIWGARNKRVELVLRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATVVF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   SF  T  +    I LP   P  + G       A
Sbjct: 160 --AMPPVVRLTTLGIRQVREELLEAGRSFGSTDLQLLWKIQLPNALPSIMAGVNQTIMMA 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +   G       GLG Y+    ++        G L +    + L+R 
Sbjct: 218 LSMVVIASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265


>gi|310818711|ref|YP_003951069.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
 gi|309391783|gb|ADO69242.1| ABC-type proline/glycine betaine transport system, periplasmic
           component [Stigmatella aurantiaca DW4/3-1]
          Length = 595

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG   ++ + ++        +    + +      Q    T + +L A  +SLL    
Sbjct: 367 LVLIGATALVTYALRRGLALAVAIVAGGLLIWDLGYWQPTMETLVLVLVATALSLLLGVP 426

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA+  R   VL  +LD+MQ+IP   +L  T++ F     G V G     +F +   
Sbjct: 427 LGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLMLFGL---GVVPGLLSTVVFVLPAP 483

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P+++ E   +F     Q    + +P++   ++  +  ++     
Sbjct: 484 -----IRLTYLGITSVPKEMIEAGEAFGARPLQLLVKIELPYARKAILEGVTQALMLSLS 538

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++  G       G+GS +  A+   D+     A L ++ +  L D++   P
Sbjct: 539 MVVIAALVGAG-------GLGSRVVRALNTVDIRQGFEAGLVIVILAILLDRMFKHP 588



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 95/284 (33%), Gaps = 25/284 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             +RFI          +S  V  L  +   +    P   + + +   V+Y L       V
Sbjct: 330 RVIRFITAHFTGELRAISRAVTWLLESSVNLLLRIPP-LVLIGATALVTYALRRGLALAV 388

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             VA G+    +GY                   T+  V+V   ++ ++ +P+GI    RP
Sbjct: 389 AIVAGGLLIWDLGYWQPTME-------------TLVLVLVATALSLLLGVPLGIVAARRP 435

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              + ++    L+   P  V+    +       +   L   + ++      I      G 
Sbjct: 436 RFYAVLRLLLDLMQTIPTFVYLIPTLMLFGLGVVPGLLSTVVFVLPA---PIRL-TYLGI 491

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           ++ P +  E   +F     +    I LP      + G   A   + +  +++ +   G  
Sbjct: 492 TSVPKEMIEAGEAFGARPLQLLVKIELPYARKAILEGVTQALMLSLSMVVIAALVGAG-- 549

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                GLG+ +  +       +     L++    + L+R   HP
Sbjct: 550 -----GLGSRVVRALNTVDIRQGFEAGLVIVILAILLDRMFKHP 588


>gi|323525535|ref|YP_004227688.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323382537|gb|ADX54628.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 285

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 9   PFISRRIFPNIFDLL----AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
               +R  P++  L+    A  +   +  +          P  +       +   +L + 
Sbjct: 24  AVPRKRSLPDLRGLVLPAAALAIWWAVSALHAGKGGLLVTPAQVWQTTWQQVTSGALAKA 83

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R  S   I  +           SR    V+ P  D  + I +  ++    V+F 
Sbjct: 84  LGASLAREASGFAIGTVLGLALGVALGLSRIAARVIGPSFDTFKQISLFAWIPLISVWFG 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                KV+   LAA+  +               +  +PR   E +R FR +  Q  W++ 
Sbjct: 144 LGDAAKVVFLSLAALLPVAAHTC--------DGIHAVPRVYVEAARVFRYTQRQLVWHVI 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +++   W   + +E ++V  +     GIG+ +    +   +  +L+ 
Sbjct: 196 LPAALPSIFTGLYLALIYSWLATLGAEYLLVAGS-----GIGNTLIDGSENFRMDLVLFG 250

Query: 245 MLTMLGVIFLYDQL 258
           ++ +  V  L   L
Sbjct: 251 IVVVGAVGSLLSAL 264



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIW 381
           R    +  L       +       W+ V    A           V   T+Q V    +  
Sbjct: 23  RAVPRKRSLPDLRGLVLPAAALAIWWAVSALHAGKGGLLVTPAQVWQTTWQQVTSGALAK 82

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ R      I +++ + +G+ +G     +  I P            + PL+    
Sbjct: 83  ALGASLAREASGFAIGTVLGLALGVALGLSRIAARVIGPSFDTFKQISLFAWIPLISVWF 142

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   ++LS          +  +   G  A P  + E A  F  T  +   ++ILP 
Sbjct: 143 GLGDAAKVVFLS----LAALLPVAAHTCDGIHAVPRVYVEAARVFRYTQRQLVWHVILPA 198

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG   A   +W A++ +E        +  +G+G  + + +E      V+ G+++
Sbjct: 199 ALPSIFTGLYLALIYSWLATLGAEYLL-----VAGSGIGNTLIDGSENFRMDLVLFGIVV 253

Query: 562 MCCFVLALNRF 572
           +      L+  
Sbjct: 254 VGAVGSLLSAL 264


>gi|104781701|ref|YP_608199.1| glycine betaine ABC transporter permease [Pseudomonas entomophila
           L48]
 gi|95110688|emb|CAK15401.1| putative glycine betaine ABC transporter, permease protein
           [Pseudomonas entomophila L48]
          Length = 283

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        VP  ++  +   +    L     +T   ML A +IS+L     
Sbjct: 54  LMLAIVGGIAWHATRRAVPTAVIVGLLFLVGAVGLWDKLMQTLALMLVATLISVLVGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A++ RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARNDRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  +  Q+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRLQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 84/245 (34%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L    + ++  +  GIAW +    V       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRATPWWLMLAIVGGIAWHATRRAVPTAVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ ++ IP+GI       + + + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATLISVLVGIPLGILSARNDRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F     +    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRLQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|325289953|ref|YP_004266134.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324965354|gb|ADY56133.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 253

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------------ITM 387
            S +L      ++ G  I + W  +  +V+                           ++ 
Sbjct: 2   TSKILVRARGYILAGAGIILFWHVLALLVHSPMLPPPQEAFAATLRLLGRDLGSHLQVSA 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           FRV++  +++ +I  P+G+ +GF   +   + P   L+   P  VF PL++  +    ++
Sbjct: 62  FRVILSTVLSLLIGFPLGLIMGFEAKLDKILAPVVYLIYPVPKIVFLPLILFFLGLGDIS 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ F   + IL          P +  +   S     ++ +R++++P   P  +
Sbjct: 122 K----VFLITFIVFFQILVTTRDAVKKVPFEMIDSLRSLGGNRFQIYRHVLIPASLPDVL 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           T    + G A      +E  +       + GLG +I ++  + +  E+  G+++M     
Sbjct: 178 TALRVSMGTAIAVLFFAESFA------TSQGLGYFIMDAWSRSAQDEMFAGIIVMGALGT 231

Query: 568 AL 569
            L
Sbjct: 232 VL 233



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 91/233 (39%), Gaps = 16/233 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +L   ++ +L+H       P        + L    L  +   +  R++ + V+SLL 
Sbjct: 17  AGIILFWHVLALLVH--SPMLPPPQEAFAATLRLLGRDLGSHLQVSAFRVILSTVLSLLI 74

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F    +     +L  +L P++ ++  +P + FL   + +            +++ +F I
Sbjct: 75  GFPLGLIMGFEAKLDKILAPVVYLIYPVPKIVFLPLILFFLGLG--------DISKVFLI 126

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  +   ++  +P ++ +  RS   + +Q + ++ +P S+P ++  + +SM  
Sbjct: 127 TFIVFFQILVTTRDAVKKVPFEMIDSLRSLGGNRFQIYRHVLIPASLPDVLTALRVSMGT 186

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               +  +E            G+G +I  A        +   ++ M  +  + 
Sbjct: 187 AIAVLFFAESFATSQ------GLGYFIMDAWSRSAQDEMFAGIIVMGALGTVL 233


>gi|47717445|gb|AAT37720.1| glycine betaine/L-proline transport system permease [Yersinia
           enterocolitica]
          Length = 290

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     + I+   L   Q +T+   +  +V  I +        A  T   +L+++   +
Sbjct: 51  LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 110

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+S     ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 111 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 167

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  +  Q  + + +P +MP ++  +  ++
Sbjct: 168 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 222

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 223 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 273



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 15/260 (5%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            + L + + V        F  L         + +F         +G+   ++  ++    
Sbjct: 29  FRPLFQGIRVPVDFILSGFQHLLLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGA 88

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                  +    +T+  V+  +    +I +P+GIW+    + +  I+P    +   PA V
Sbjct: 89  IGAWSQAM----VTLALVLTSLFFCILIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFV 144

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +   +V          N+   ++ I      I+   I G    P D  E A SF     +
Sbjct: 145 YLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIKQVPADLIEAAESFGANPRQ 200

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P  + G       A +  +++ + + G       GLG  +     +   
Sbjct: 201 MLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDM 253

Query: 553 PEVVLGVLIMCCFVLALNRF 572
               +G + +    + L+R 
Sbjct: 254 GLAAVGGVGIVILAIILDRL 273


>gi|121602958|ref|YP_980287.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120591927|gb|ABM35366.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 259

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+     ++    I+  RVV    +++++ IP+G+ IG    + + ++P    +   PA 
Sbjct: 54  TWAMEDDLMGDAFISTMRVVTGWALSALLAIPLGLLIGSWRAVQALLEPLTDFIRYMPAV 113

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F PLV+  V             ++  GT + ++  V       P    E A +   T  
Sbjct: 114 AFIPLVMLWVGI----DEGAKVAIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGATRR 169

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                +ILP   P  +       G AW   +V+E+ +        +GLG  I ++     
Sbjct: 170 EVLEKVILPSAKPALLDTLRITMGWAWTYLVVAELVA------ANSGLGFAILKAQRFLQ 223

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             ++  G+L++    LA+++  
Sbjct: 224 TDKIFAGILLIGFIGLAIDQLF 245



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 81/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  +T+R+++   +S L       L    R +  +L P+ D ++ +P + F+   +
Sbjct: 61  LMGDAFISTMRVVTGWALSALLAIPLGLLIGSWRAVQALLEPLTDFIRYMPAVAFIPLVM 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            E A +  IF    + M   + + +  +P    E +++   +  +  
Sbjct: 121 LWVGID--------EGAKVAIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGATRREVL 172

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P L+  + ++M   W ++V +E++          G+G  I  A +      
Sbjct: 173 EKVILPSAKPALLDTLRITMGWAWTYLVVAELVAANS------GLGFAILKAQRFLQTDK 226

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I   +L +  +    DQL 
Sbjct: 227 IFAGILLIGFIGLAIDQLF 245


>gi|306842376|ref|ZP_07475033.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306287515|gb|EFM58980.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 281

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + Q A RT   +    V+S++       L A+S RL  ++ PILD+MQ++P   +L   V
Sbjct: 82  MWQDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV 141

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       G+V G     I+AI       +       +  + +D+ E + +F  S  QK 
Sbjct: 142 MLLG---IGRVPGLIAVVIYAIP-----PIIRLTNLGIRLVDKDVLEAADAFGSSNIQKL 193

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 194 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 246

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 247 GIFNGLAIVGIAIIFDRV 264



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 89/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               + I      F     + ++     L            Q      ++ +L I W   
Sbjct: 2   RMLKQTIDEGFRTFTRGYGDAIENFFSPLQKFLLISERFMTQTPWPIILAIILAIAWVAS 61

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                +  A  ++  I     +QD +        T+  + V  +++ II +P+GI +   
Sbjct: 62  RSVRVVLSALITLFLIGYFDMWQDAMR-------TISMIFVCTVLSIIIGLPIGILMARS 114

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   I P   ++   P+ V+   VV  +    +   + + +  I      I+     G
Sbjct: 115 ERLQRIINPILDVMQTMPSFVYLIPVVMLLGIGRVPGLIAVVIYAI----PPIIRLTNLG 170

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  +  +    + LP   P  + G       A    +++ +     
Sbjct: 171 IRLVDKDVLEAADAFGSSNIQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 227

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 228 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 263


>gi|330876968|gb|EGH11117.1| sulfonate ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968187|gb|EGH68447.1| sulfonate ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 285

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALLTGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ AG         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFAGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A L   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALLTGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFAGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|229593224|ref|YP_002875343.1| putative aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229365090|emb|CAY53295.1| putative aliphatic sulfonates ABC transport system, permease
           protein [Pseudomonas fluorescens SBW25]
          Length = 262

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 17/241 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFR 389
           + RV+  +       V  +++   W S   +            +           I+ +R
Sbjct: 7   SHRVAPWVLPVLLLAVWQLSVSAGWLSTRILPAPSAVIAAGVHLVASGEIWTHLAISGWR 66

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             +  +I   I + +G   G        +    Q++   P     PLV+           
Sbjct: 67  AGLGFVIGGSIGLALGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DE 122

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                L+  GT + I  N   G         E++ S+ ++G+  +R +ILPG  P  + G
Sbjct: 123 TAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFRQVILPGALPSILVG 182

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A G  W   IV+E  S       ++G+G     + E      VVL +++        
Sbjct: 183 VRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVMYAILGKLA 236

Query: 570 N 570
           +
Sbjct: 237 D 237



 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +S R+ P +  +L   +    ++      +    P  ++      +    +  + + +  
Sbjct: 6   LSHRVAPWVLPVLLLAVWQLSVSAGWLSTRILPAPSAVIAAGVHLVASGEIWTHLAISGW 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI          +   S     +L   + +++++P L  +   +++F       
Sbjct: 66  RAGLGFVIGGSIGLALGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E+SRS+ LSG+  F  + +P ++P
Sbjct: 122 ----ETAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFRQVILPGALP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 178 SILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVMYAI 231

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLER 274
           +  L D   + L R  + W   +++ +
Sbjct: 232 LGKLADLAARGLERVWLRWHPAYQVNK 258


>gi|222110194|ref|YP_002552458.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
 gi|221729638|gb|ACM32458.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
          Length = 400

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 24/264 (9%)

Query: 3   LYNILPPFISRR-----IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD 57
           + N  P F + R         + DLL  V    +I ++     +    R +     ++L 
Sbjct: 104 VENFRPFFQAVRAPIDATLTGVTDLLLAVPAPALIALVTLLAWQFAG-RGLAVGAALSLG 162

Query: 58  VHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +L      A  T   +L++++  ++       + A S R      P+LD MQ+ P   
Sbjct: 163 LVALLGIWPDAMVTLALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFV 222

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   V+ F     G V G  +  +FA+       +       L  +  DL E SR++  
Sbjct: 223 YLVPVVMLFG---IGNVPGVIVTIVFALP-----PLVRLTNLGLRQVRPDLIEASRAYGA 274

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q  W + +P +MP ++  +  ++      VV + MI VG       G+G  +   I 
Sbjct: 275 SPLQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIG 327

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL 258
             D+       L ++ +  + D+L
Sbjct: 328 RLDMGLATVGGLGIVLLAIVLDRL 351



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLI 394
           V+ +L       +  +   +AWQ  G  +            +L +     +T+  V+  +
Sbjct: 125 VTDLLLAVPAPALIALVTLLAWQFAGRGLAVGAALSLGLVALLGIWPDAMVTLALVLTSL 184

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +   +I +P+GI +          +P    +   PA V+   VV          N+   +
Sbjct: 185 LFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVI 240

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           + I      ++     G      D  E + ++  +  +    + LP   P  + G   A 
Sbjct: 241 VTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPLQLLWKVQLPLAMPSIMAGINQAL 300

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 301 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRL 351


>gi|299770776|ref|YP_003732802.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. DR1]
 gi|298700864|gb|ADI91429.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. DR1]
          Length = 259

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 10/198 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R      +A +I +P+G+ +G  P +++ + PF Q L   P     PLVV  +  
Sbjct: 66  LVSTARAFFAFFVAIVIGVPLGLLMGRSPVLNAILDPFVQFLRPIPKIALIPLVVVWLGI 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A +   P    + A +  +        +ILP   
Sbjct: 126 GEESK----FFLIFIATLLSVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSL 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    + G  W + I +E+ +       T+GLG  I  +        V++G++++ 
Sbjct: 182 PEIFTTIRLSIGIGWTSLIAAEMVA------ATSGLGWMIINAGSYLRTDVVIVGIILLG 235

Query: 564 CFVLALNRFLWHPLYLYG 581
                L+  +      + 
Sbjct: 236 TIGFILDWLIVKAQQKWA 253



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 100/252 (39%), Gaps = 19/252 (7%)

Query: 22  LLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLP----QYASRTTLRMLSAM 76
           L+ FV++  ++    L        P  I+D V              Q+   +T R   A 
Sbjct: 17  LITFVIIWQLVCTFKLVSPILLPSPLQILDTVLDLFKNGYRDAPFYQHILVSTARAFFAF 76

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++++       L  +S  L  +L P +  ++ IP +  +   VV+            E 
Sbjct: 77  FVAIVIGVPLGLLMGRSPVLNAILDPFVQFLRPIPKIALIPLVVVWLGIG--------EE 128

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +  F IF + + ++      +  N+P  L + +++  L      + + +P S+P +   +
Sbjct: 129 SKFFLIFIATLLSVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSLPEIFTTI 188

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +S+  GW  ++A+EM+          G+G  I  A        ++  ++ +  + F+ D
Sbjct: 189 RLSIGIGWTSLIAAEMVA------ATSGLGWMIINAGSYLRTDVVIVGIILLGTIGFILD 242

Query: 257 QLLFRPMIVWSN 268
            L+ +    W+ 
Sbjct: 243 WLIVKAQQKWAP 254


>gi|295097267|emb|CBK86357.1| ABC-type proline/glycine betaine transport system, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 354

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 158 FCVVIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 214

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 215 IIFA-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVN 269

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D+
Sbjct: 270 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDR 322

Query: 258 L 258
           L
Sbjct: 323 L 323



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              IT+  V+  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V   
Sbjct: 144 QAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF 203

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  N+   ++ I      I+   I G +  P D  E + SF  +  +    + LP 
Sbjct: 204 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 259

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G       A +  +++ + + G       GLG  +     +       +G + 
Sbjct: 260 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVG 312

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 313 IVILAIILDRL 323


>gi|308183780|ref|YP_003927912.1| glycine/betaine/carnitine ABC transporter, membrane-spanning
           subunit [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308047706|gb|ADO00249.1| glycine/betaine/carnitine ABC transporter, membrane-spanning
           subunit [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 279

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 16/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  ++V+ +   +  G ++ +     V  + +  ++    +  ++T   +LS+ +I+++
Sbjct: 50  WVFILVVLALTYWVKRGQKKISFMVFEVLGLLLIWNLGY-WRDMTQTLTLVLSSSLIAIV 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS R  +V+ PILD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 109 VGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFFG---IGMVPGVLASVIFA 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                           +  +P DL EV+ SF  + WQK   L +P +   ++  +  +M 
Sbjct: 166 TP-----PTVRMTNLGIRQVPSDLIEVADSFGSTSWQKLIKLQLPLAKTTIMSGINQTMM 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G   VV + MI          G+G+ +  A+   D  A   A + ++ V  + D++
Sbjct: 221 LGLSMVVIASMI-------GALGLGTQVYFAVGRNDAGAGFAAGIAVVIVAIILDRI 270



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   +IA ++ IP+GIW+         I+P    +   PA V+    VS      
Sbjct: 95  TLTLVLSSSLIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFFGIGM 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L   +          +     G    P+D  EVA SF  T W+    + LP     
Sbjct: 155 VPGVLASVIF----ATPPTVRMTNLGIRQVPSDLIEVADSFGSTSWQKLIKLQLPLAKTT 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G         +  +++ +           GLG  +  +  +          + +   
Sbjct: 211 IMSGINQTMMLGLSMVVIASMIG-------ALGLGTQVYFAVGRNDAGAGFAAGIAVVIV 263

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 264 AIILDRI 270


>gi|70733908|ref|YP_257548.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348207|gb|AAY95813.1| probable permease of ABC transporter PA5095 [Pseudomonas
           fluorescens Pf-5]
          Length = 283

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +   ++  +   +    L     +T   ML A +IS+L     
Sbjct: 54  LMLAIVGGIAWHATRKLLTTAVIVGLLFLVGAVGLWDKLMQTLALMLVATLISVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P ++P ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   ++       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLAIVGGIAWHATRKLLTTAVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  +I+ +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|329296716|ref|ZP_08254052.1| glycine betaine transporter membrane protein [Plautia stali
           symbiont]
          Length = 211

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L+A++  +L         A+S     ++ P+LD MQ+ P   +L   V+ F    
Sbjct: 3   TLALVLNALLFCVLIGLPLGIWLARSEHASRIVRPLLDAMQTTPAFVYLVPIVMLFG--- 59

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G V G  +  IFA     +  +       +  +P DL E S SF  S  Q  + + +P 
Sbjct: 60  IGNVPGVVVTIIFA-----LPPVVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPL 114

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP ++  +  ++      VV + MI VG       G+G  +   I   D+       + 
Sbjct: 115 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVG 167

Query: 248 MLGVIFLYDQL 258
           ++ +  + D+L
Sbjct: 168 IVILAIILDRL 178



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 11/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+  V+  ++   +I +P+GIW+    H S  ++P    +   PA V+   +V     
Sbjct: 1   MVTLALVLNALLFCVLIGLPLGIWLARSEHASRIVRPLLDAMQTTPAFVYLVPIVMLFGI 60

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N+   ++ I      ++   I G    P D  E + SF  +  +    + LP   
Sbjct: 61  G----NVPGVVVTIIFALPPVVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPLAM 116

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       A +  +++ + + G       GLG  +     +       +G + + 
Sbjct: 117 PTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIV 169

Query: 564 CFVLALNRF 572
              + L+R 
Sbjct: 170 ILAIILDRL 178


>gi|294624964|ref|ZP_06703616.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666953|ref|ZP_06732182.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600727|gb|EFF44812.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603242|gb|EFF46664.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 264

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  V + I   I   +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G  +      E+A ++ + G + +  ++LPG  
Sbjct: 123 ----DEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNYGLRGPQLFWDVLLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VV+ +++  
Sbjct: 179 PSILVGLRFALGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 232

Query: 564 CFVLALN 570
                 +
Sbjct: 233 LLGKLAD 239



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +    L Q+ + ++ R    + I     F    L    R    +L 
Sbjct: 39  LPAPDAVMRAAVTLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 99  SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGIRSV 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R++ L G Q FW + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 151 DPALIEMARNYGLRGPQLFWDVLLPGALPSILVGLRFALGLMWLTLIVAETISASS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             GIG     A +      ++ A++    +  L D
Sbjct: 207 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD 239


>gi|255526484|ref|ZP_05393394.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185853|ref|ZP_06854259.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255509803|gb|EET86133.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049521|gb|EFG88949.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 263

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    ++  RV +   I  II  P+ I +G +  +   I+PF + +   P     P+
Sbjct: 48  GILIKSLGVSFSRVFIGFFITFIIAFPMAIILGMKKELLPYIEPFLEFMRHVPPIAVIPM 107

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +       ++   T + I  N + G + +     EV   F  +    +  
Sbjct: 108 LILWFGIGETSK----LAVIFLATFFPIFSNTLNGVTNYDEKLLEVGEIFGFSTTDKFFK 163

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILP   P  +TG     G +W + + +E+ +       ++G+G  I ++ +      ++
Sbjct: 164 IILPQAVPSIITGIQLGLGYSWRSLMGAELIA------ASSGIGYMIMDAEQLSRPDIIL 217

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+  +      ++   
Sbjct: 218 VGIFSIGILGYLVDYIF 234



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 15/267 (5%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  +LV  I + L +        P  + +     +    L +    +  R+     I+ +
Sbjct: 11  LVIILVWCIGSKLHIFNDYIIPSPAAVFNTTLELIKSGILIKSLGVSFSRVFIGFFITFI 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F  A +    + L   + P L+ M+ +P +  +   +++F      K+    LA  F 
Sbjct: 71  IAFPMAIILGMKKELLPYIEPFLEFMRHVPPIAVIPMLILWFGIGETSKLAVIFLATFFP 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF+        +    + N    L EV   F  S   KF+ + +P ++P ++  + + + 
Sbjct: 131 IFS--------NTLNGVTNYDEKLLEVGEIFGFSTTDKFFKIILPQAVPSIITGIQLGLG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ +E+I          GIG  I  A +      IL  + ++  + +L D +   
Sbjct: 183 YSWRSLMGAELIAASS------GIGYMIMDAEQLSRPDIILVGIFSIGILGYLVDYIFIN 236

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYL 288
               +++ +  E   G       V  L
Sbjct: 237 ITSKFAHSYGREVDYGRTGNKKAVQEL 263


>gi|71734144|ref|YP_276955.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554697|gb|AAZ33908.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 283

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  +L   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNLGRGLEAGLAIVILAVVIDRI 270



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L I  + ++  +  GIAW +   IV       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRIAPWWLMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNLGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|229589718|ref|YP_002871837.1| putative ATP-binding protein/permease [Pseudomonas fluorescens
           SBW25]
 gi|229361584|emb|CAY48461.1| Putative bi-functional protein (ATP-binding and permease)
           [Pseudomonas fluorescens SBW25]
          Length = 733

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 92/237 (38%), Gaps = 16/237 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYASRTTLRMLSAMVISLLF 82
                +  + ++    +   +P  +     +  + +    +    T   + S+++I+L+ 
Sbjct: 500 WLPWPVSALTLVFLAWRSAGLPLALTSSAALLYIGLFGFWERTIATLALVGSSVLIALVI 559

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L AK   L  V+ P+LD+MQ++P   +L   V +F     GK        IFA+
Sbjct: 560 GVPTGILLAKRPLLRRVITPLLDVMQTLPTFVYLIPAVAFFSV---GKTPAVIATVIFAL 616

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M       +  + +D  E + +   S WQ    + +P +   L+  +  ++  
Sbjct: 617 A-----PMIRLTSLGIQEVAKDAVEAAVAHGASPWQTLIKVQLPLARRSLLLGINQTIVM 671

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               VV + +I  G       G+G  +  A++       + A + ++    + D+++
Sbjct: 672 SLSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGVAIVLCALIPDRII 721



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 16/240 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    + V     + +AW+S G  +   +   +LY+   G       T+  V   ++IA
Sbjct: 497 LLGWLPWPVSALTLVFLAWRSAGLPLALTSSAALLYIGLFGFWERTIATLALVGSSVLIA 556

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P GI +  RP +   I P   ++   P  V+    V+  S       +   +  +
Sbjct: 557 LVIGVPTGILLAKRPLLRRVITPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFAL 616

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      D  E A +   + W+    + LP      + G       +
Sbjct: 617 A----PMIRLTSLGIQEVAKDAVEAAVAHGASPWQTLIKVQLPLARRSLLLGINQTIVMS 672

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            +  +V+ +   G       GLG  +  +       E VL  + +    L  +R +   L
Sbjct: 673 LSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGVAIVLCALIPDRIIQSSL 725


>gi|21224423|ref|NP_630202.1| transport system integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|13276821|emb|CAC33939.1| putative transport system integral membrane protein [Streptomyces
           coelicolor A3(2)]
          Length = 303

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P D+ +++        L  Y   +  R L     +L+       L A+ + +   +
Sbjct: 77  KLPAPSDVWEVLHQAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKFVRAAI 136

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++                   I    V ++   +   +  
Sbjct: 137 GPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA--------VILLGAVPSIANGLVSGVDQ 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +        R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I       
Sbjct: 189 VSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFPD 246

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              G+G  +       D+  +  A+L +L V    D L+F P+  W  + R
Sbjct: 247 LGVGLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFSPLERWVLRSR 297



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 8/218 (3%)

Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           V    +Q  L    LG I  ++ R ++    A +I  P+G+ +     + + I P    L
Sbjct: 84  VWEVLHQAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKFVRAAIGPILSGL 143

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            + P+  + P  V  +       N  +  +++ G    I   +++G       F     +
Sbjct: 144 QSLPSVAWVPPAVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVSPIFLRAGRT 199

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              TG R   +I+LP   P YV G       +W + + +E+ +         GLG  +  
Sbjct: 200 LGATGLRGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLEN 257

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                    V   +L++    +A++  ++ PL  +  R
Sbjct: 258 GRNASDMAMVFEAILLILVVGIAIDLLIFSPLERWVLR 295


>gi|239983080|ref|ZP_04705604.1| transport system integral membrane protein [Streptomyces albus
           J1074]
 gi|291454911|ref|ZP_06594301.1| transport system integral membrane protein [Streptomyces albus
           J1074]
 gi|291357860|gb|EFE84762.1| transport system integral membrane protein [Streptomyces albus
           J1074]
          Length = 305

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 10/226 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  +   V       +L  Y   +  R L   + +L        L A+ + +   +
Sbjct: 79  KLPSPGAVWGEVTDAWYQGTLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAI 138

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++            +      I    V ++   +   +  
Sbjct: 139 GPILSGLQSLPSVAWVPPAVIWLGLN--------DQMMFAVILLGAVPSIANGLVSGVDQ 190

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 191 VPPLYLRAGRTLGATGLRGTWHIVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELG 250

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
              G+G  +        +  +  A+L +L V    D L+F P+  W
Sbjct: 251 I--GLGQLLENGRVASSMSMVFLAILLILVVGVAIDLLIFSPLERW 294



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++  + A  I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 97  GTLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       +  +  +++ G    I   +++G    P  +     +   TG R   +
Sbjct: 157 AVIWLGL----NDQMMFAVILLGAVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWH 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P Y+ G       +W + + +E+ +         GLG  +       S   V 
Sbjct: 213 IVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELGI--GLGQLLENGRVASSMSMVF 270

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
           L +L++    +A++  ++ PL  +  R
Sbjct: 271 LAILLILVVGVAIDLLIFSPLERWVLR 297


>gi|218885625|ref|YP_002434946.1| binding-protein-dependent transporters inner membrane component
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756579|gb|ACL07478.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 292

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 102/271 (37%), Gaps = 29/271 (10%)

Query: 14  RIFPNIFDLLAFVLV--------IGIINILLHGIQETTVPRDIVDIVPI----TLDVHSL 61
           RI  N + L    +V        +   N+L  G      P ++++ + +     L   +L
Sbjct: 32  RILTNRWFLHTVSIVAFFSLWDWLARSNVLGGGSSALARPHEVLEQLVVLTREELAELTL 91

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             +   +T R++    I+           A +R +  ++ P+ D+++ +P + +++ +++
Sbjct: 92  WGHVWASTQRVVVGFSIAAAIAVPLGLFMALNRYVNAIVKPLFDLLKPMPPISWISISIL 151

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F           E + +F I          + Y  +  +  +L +V R        +  
Sbjct: 152 WFGIG--------ETSKVFIIVLGTFVPCLLNSYNGVRLVEPELYDVVRMLGGKRRDEIL 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++  P S P +   + +S+S  W  V+A+E++          G+G  I   +       +
Sbjct: 204 HVCFPASFPAIFAGLQISLSIAWTCVLAAELVS------ARSGLGYIIVQGMNLSQPAMV 257

Query: 242 LYAMLTMLGVI---FLYDQLLFRPMIVWSNK 269
           +  M  +        L    L R +  W  K
Sbjct: 258 IGGMAVIAAAAWGTTLLVTALERKLCPWKRK 288



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RVVV   IA+ I +P+G+++    ++++ ++P   LL   P   +  + +      
Sbjct: 97  ASTQRVVVGFSIAAAIAVPLGLFMALNRYVNAIVKPLFDLLKPMPPISWISISILWFGIG 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       +++ GT    L N   G      +  +V             ++  P  FP
Sbjct: 157 ETSK----VFIIVLGTFVPCLLNSYNGVRLVEPELYDVVRMLGGKRRDEILHVCFPASFP 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC- 563
               G   +   AW   + +E+ S        +GLG  I +         V+ G+ ++  
Sbjct: 213 AIFAGLQISLSIAWTCVLAAELVS------ARSGLGYIIVQGMNLSQPAMVIGGMAVIAA 266

Query: 564 ------CFVLALNRFL--WHP 576
                   V AL R L  W  
Sbjct: 267 AAWGTTLLVTALERKLCPWKR 287


>gi|78063691|ref|YP_373599.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77971576|gb|ABB12955.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 321

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV+ ++  +            +  ++   +    L     +T   ML + V+S+      
Sbjct: 55  LVLLVVGAIAWNATRRIGLGVLFMLLLYAIGCFGLWDKLMQTLALMLVSTVLSVAIGVPV 114

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LA++S  L  +L+P+LD+MQ++P   +L   ++ F           ++ AI A     
Sbjct: 115 GILASRSAWLRRMLLPVLDVMQTLPSFVYLIPVLMLFGLG--------KVPAILATIIYA 166

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +  D+ E +R+F  + WQ    + +P + P ++  +  +       
Sbjct: 167 LPPLIRLTDLGIRQVDPDVTEAARAFGTTRWQLLVNVQLPLARPSIMAGINQTTMMALSM 226

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  +   I+  D+     A L ++ +  + D++
Sbjct: 227 VVIASMIGS-------RGLGEDVLAGIQTLDVGKGTQAGLAIVILAIVIDRI 271



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 90/279 (32%), Gaps = 17/279 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
              ++  +   F +   +        +        E  L++     V  ++    +    
Sbjct: 10  IADWVNSALETFVAQYGDGFHHFSVLVLRYLLVPLEGALRVAPPWLVLLVVGAIAWNATR 69

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            + +G+ +  + Y +  F   D L        T+  ++V  +++  I +PVGI       
Sbjct: 70  RIGLGVLFMLLLYAIGCFGLWDKLMQ------TLALMLVSTVLSVAIGVPVGILASRSAW 123

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+           +   L  I      ++     G  
Sbjct: 124 LRRMLLPVLDVMQTLPSFVYLIPVLMLFGLG----KVPAILATIIYALPPLIRLTDLGIR 179

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  E A +F  T W+    + LP   P  + G       A +  +++ +       
Sbjct: 180 QVDPDVTEAARAFGTTRWQLLVNVQLPLARPSIMAGINQTTMMALSMVVIASMIG----- 234

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + GLG  +    +     +     L +    + ++R 
Sbjct: 235 --SRGLGEDVLAGIQTLDVGKGTQAGLAIVILAIVIDRI 271


>gi|330944591|gb|EGH46545.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 226

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQY 64
           P + +R    +  L+   ++I ++ +++        +   P +IV  +   L   +L ++
Sbjct: 22  PTLWQRYRTPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVMTLR-DLADGALWKH 80

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            S + LR+LS   I      V+A     SR     L P    ++SIP L ++   +++  
Sbjct: 81  ISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLG 140

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + I  I     + +  +   ++  I R L EV + + LS ++    + 
Sbjct: 141 IG--------ETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 192

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           +P ++PGL   +   MS  W F+VA+E+I  
Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIAA 223



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 4/144 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 83  ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVAS 528
              TG  +    +W   + +E+ +
Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA 222


>gi|256784385|ref|ZP_05522816.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
 gi|289768264|ref|ZP_06527642.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
 gi|289698463|gb|EFD65892.1| transport system integral membrane protein [Streptomyces lividans
           TK24]
          Length = 303

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P D+ +++        L  Y   +  R L     +L+       L A+ + +   +
Sbjct: 77  KLPAPSDVWEVLHQAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKFVRAAI 136

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++                   I    V ++   +   +  
Sbjct: 137 GPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA--------VILLGAVPSIANGLVSGVDQ 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +        R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I       
Sbjct: 189 VSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFPD 246

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              G+G  +       D+  +  A+L +L V    D L+F P+  W  + R
Sbjct: 247 LGVGLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFSPLERWVLRSR 297



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++    A +I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 95  GELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 154

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G       F     +   TG R   +
Sbjct: 155 AVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVSPIFLRAGRTLGATGLRGTWH 210

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 211 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 268

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 269 EAILLILVVGIAIDLLIFSPLERWVLR 295


>gi|167033694|ref|YP_001668925.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860182|gb|ABY98589.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 317

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L +  +   +  T   +L+++    +       + A+S RL  ++ P+LD MQ++P   +
Sbjct: 89  LGLIGVWSESMTTLALVLTSVFFCAVIGIPLGIVCARSNRLESIIRPLLDAMQTLPAFVY 148

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+ F     G V G  +  +FA     +  +       +  +P D  E +R+F  +
Sbjct: 149 LVPVVMLFG---IGNVPGVLVTIVFA-----LPPLVRLTNLGIRQVPEDKIEAARAFGCT 200

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P +   ++  +  ++      VV + MI VG       G+G  +   I  
Sbjct: 201 PRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-------GLGQMVLRGIGR 253

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D+       + ++ +    D+L
Sbjct: 254 LDMGLATVGGVGLVLLAIFLDRL 276



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 86/280 (30%), Gaps = 12/280 (4%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F            + L+  V         IR+   +    +    +            +
Sbjct: 9   PFQAATIPLGDWVTATLNFLVHNFREVFRAIRWPIDQVLNGIEFTLQSIPPTIGILLSSL 68

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G  +    +         T   ++ V      T+  V+  +   ++I IP+GI      
Sbjct: 69  LGWQL-AGKRMAVLCFITLTLLGLIGVWSESMTTLALVLTSVFFCAVIGIPLGIVCARSN 127

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + S I+P    +   PA V+   VV          N+   L+ I      ++     G 
Sbjct: 128 RLESIIRPLLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIVFALPPLVRLTNLGI 183

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A +F  T  +    + LP      + G       + +  +++ + S G  
Sbjct: 184 RQVPEDKIEAARAFGCTPRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-- 241

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +     +       +G + +    + L+R 
Sbjct: 242 -----GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276


>gi|15597491|ref|NP_250985.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|218891731|ref|YP_002440598.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254240734|ref|ZP_04934056.1| hypothetical protein PA2G_01398 [Pseudomonas aeruginosa 2192]
 gi|9948326|gb|AAG05683.1|AE004655_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126194112|gb|EAZ58175.1| hypothetical protein PA2G_01398 [Pseudomonas aeruginosa 2192]
 gi|218771957|emb|CAW27736.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 265

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-------YIVNHFTYQDVLY 378
             P +     + +  S    + ++ +  G+ + +   +          ++          
Sbjct: 3   SLPISRPWRWATRAASLAACLAFWQLAAGLQLNLGLVTFANVPTPGAVLLAACNLAQSSV 62

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV    ++A+ + I +G+ IG      + + P  ++L   PA  + PL +
Sbjct: 63  LLAHLGASLARVFAGYLLAAALGIALGLAIGRSAWAEALLLPPLEVLRPIPAVAWIPLAI 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    +  +   G  + IL N + G  A        A S         R ++
Sbjct: 123 LMFPSSEAS----MIFITFTGALFPILLNTVHGVEALDPRLLASARSLGAGRRALLREVL 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P   TG     G +W   + +E+ S         GLG Y   S    ++ EVV+G
Sbjct: 179 LPGAGPGIFTGLAIGMGTSWFCLVTAEMISGQW------GLGYYTWASYNIQNYDEVVVG 232

Query: 559 VLIMCCFVLALNRFLWH 575
           +L++  F +  +  +  
Sbjct: 233 MLLIGLFGMGSSGLVKR 249



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 85/230 (36%), Gaps = 14/230 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+ L        P  ++           L  +   +  R+ +  +++            
Sbjct: 34  LNLGLVTFANVPTPGAVLLAACNLAQSSVLLAHLGASLARVFAGYLLAAALGIALGLAIG 93

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S     +L+P L++++ IP + ++   ++ F          +E + IF  FT  ++ + 
Sbjct: 94  RSAWAEALLLPPLEVLRPIPAVAWIPLAILMF--------PSSEASMIFITFTGALFPIL 145

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +   L   +RS           + +P + PG+   + + M   WF +V +E
Sbjct: 146 LNTVHGVEALDPRLLASARSLGAGRRALLREVLLPGAGPGIFTGLAIGMGTSWFCLVTAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          G+G Y   +   Q+   ++  ML +         L+ R
Sbjct: 206 MISG------QWGLGYYTWASYNIQNYDEVVVGMLLIGLFGMGSSGLVKR 249


>gi|320539493|ref|ZP_08039162.1| putative glycine betaine transporter subunit [Serratia symbiotica
           str. Tucson]
 gi|320030618|gb|EFW12628.1| putative glycine betaine transporter subunit [Serratia symbiotica
           str. Tucson]
          Length = 349

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL     I I+   L   Q  +V    + +V  I +        A  T   +L+A++  +
Sbjct: 94  LLGMPASIAIVLFSLIAWQVASVGMGALTLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 153

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                  T  ++S+    V+ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 154 AIGLPLGTWLSRSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 210

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P +L E ++SF  S  Q  + + +P +MP ++  +  ++
Sbjct: 211 A-----LPPIVRMTILGINQVPEELIEAAQSFGASPRQLLFKVQLPLAMPTIMVGVNQTL 265

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 266 MLALSMVVIASMIAVG-------GLGQIVLRGIGRLDMGLAAVGGVGIVILAIILDRL 316



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 101/299 (33%), Gaps = 17/299 (5%)

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
            +  I P    +L  F  T     +G         L  + + L + + V   +    F  
Sbjct: 35  NSAPIQPEHFNLLDPFHNTWLP--LGSWVTQGIDWLVLHFRPLFQGIRVPVDYILNGFQH 92

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L      S  + +F        ++G+   ++  ++           +    +    V+  
Sbjct: 93  LLLGMPASIAIVLFSLIAWQVASVGMGALTLVSLIAIGAIGAWSQAMVTLAL----VLTA 148

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++    I +P+G W+    H +  I+P    +   PA V+   +V          N+   
Sbjct: 149 LLFCIAIGLPLGTWLSRSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGV 204

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ I      I+   I G +  P +  E A SF  +  +    + LP   P  + G    
Sbjct: 205 VVTIIFALPPIVRMTILGINQVPEELIEAAQSFGASPRQLLFKVQLPLAMPTIMVGVNQT 264

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              A +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 265 LMLALSMVVIASMIAVG-------GLGQIVLRGIGRLDMGLAAVGGVGIVILAIILDRL 316


>gi|241765783|ref|ZP_04763725.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241364321|gb|EER59466.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 278

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            V R             + +        F +V        + S  ++ +  T     +++
Sbjct: 15  PVRRRSLAPLEPVSARARWLLGFGFFVLFVLVWAFFTLGGYVSPTFLASPVTMAKEGWLL 74

Query: 381 WL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +          +T++RV    I+A+++ +P+GI +G    I +  +PF       PA+ F
Sbjct: 75  FSEYGFHKDIGMTVWRVFGGFILAAVVAVPLGIAMGAYKGIEAFFEPFVSFCRYLPASAF 134

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++               L++  G+ + I   V         D  E A +        
Sbjct: 135 IPLLILWAGIGETQK----ILVIFIGSVFQITLMVAVTVGGARRDLVEAAYTLGAGHKGI 190

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              +++PG  P          G AW   IV+E+         ++G+G  I +S    + 
Sbjct: 191 VTRVLIPGAAPEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQSLLNT 243



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 80/239 (33%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + FVLV     +  +        P  +     +    +   +    T  R+    +++ 
Sbjct: 40  FVLFVLVWAFFTLGGYVSPTFLASPVTMAKEGWLLFSEYGFHKDIGMTVWRVFGGFILAA 99

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++            E   I 
Sbjct: 100 VVAVPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG--------ETQKIL 151

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +T  +  ++    RDL E + +           + +P + P +   + + +
Sbjct: 152 VIFIGSVFQITLMVAVTVGGARRDLVEAAYTLGAGHKGIVTRVLIPGAAPEIAETLRLVL 211

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D   
Sbjct: 212 GWAWTYVIVAELIGSSS------GIGHMITDSQSLLNTGQIIFGIIIIGLIGLVSDFAF 264


>gi|66048054|ref|YP_237895.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|289672073|ref|ZP_06492963.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|302188564|ref|ZP_07265237.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
 gi|63258761|gb|AAY39857.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330940565|gb|EGH43627.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330954740|gb|EGH55000.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
 gi|330972984|gb|EGH73050.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|330982273|gb|EGH80376.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 283

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   
Sbjct: 87  GLWDKLMQTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPV 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ AIFA        +       +  +  ++ E   +F  + WQ+
Sbjct: 147 LMLFGLG--------KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQ 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  +       VV + MI          G+G  + + I+  ++ 
Sbjct: 199 LFGVQLPLAMPSIMAGINQTTMMALSMVVIASMI-------GARGLGEDVLVGIQTLNVG 251

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ +  + D++
Sbjct: 252 RGLEAGLAIVILAVVIDRI 270



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   IV       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLMIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|118500403|gb|ABK97401.1| MsmH [uncultured bacterium Sargasso-2222818]
          Length = 272

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV    I+A II IP G+ +    +      P  ++L   P   + P  +     
Sbjct: 73  YMSSGRVFAGFIMAQIIGIPFGLALAVNRYFKDIFFPPFEILRPIPPLAWVPASIV---- 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +     + ++ +   G  + I+ NV+ GA +    +   A S   T W  +  IILPG  
Sbjct: 129 FWPTTEMSIAFVTFLGAFFTIVINVLGGAKSIDIRYLRAAQSMGATQWHLFTKIILPGTL 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA    G  W   +  E+ S G     + GLG +I  S   G+   V++G++ + 
Sbjct: 189 PSIFTGAAVGMGITWEVVLAGEMISGGGGQQASGGLGFFIWSSYMGGTVASVIVGMISIG 248

Query: 564 CFVLA---LNRFL------WHPLY 578
                   L RF+      W  L+
Sbjct: 249 IAGYLSSSLIRFIGSRSMPWRNLF 272



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 19/270 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIIN--------ILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           S+     I  LL F+++   ++        I L  I     P ++VD     + +    +
Sbjct: 11  SQTFARGIIALLGFIIIWEFLSKYVPLLTGITLPWIGHVPPPTEVVDAWSEVVFLPGYWE 70

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               ++ R+ +  +++ +    +    A +R    +  P  +I++ IP L ++  ++V++
Sbjct: 71  SWYMSSGRVFAGFIMAQIIGIPFGLALAVNRYFKDIFFPPFEILRPIPPLAWVPASIVFW 130

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E++  F  F    + +  ++     +I       ++S   + W  F  +
Sbjct: 131 --------PTTEMSIAFVTFLGAFFTIVINVLGGAKSIDIRYLRAAQSMGATQWHLFTKI 182

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +     + M   W  V+A EMI  G       G+G +I  +     + +++ 
Sbjct: 183 ILPGTLPSIFTGAAVGMGITWEVVLAGEMISGGGGQQASGGLGFFIWSSYMGGTVASVIV 242

Query: 244 AMLTMLGVIFL---YDQLLFRPMIVWSNKF 270
            M+++    +L     + +    + W N F
Sbjct: 243 GMISIGIAGYLSSSLIRFIGSRSMPWRNLF 272


>gi|71736545|ref|YP_275756.1| sulfonate ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557098|gb|AAZ36309.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 285

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ +G         + A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIKAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALITGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L + + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIKAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|239928177|ref|ZP_04685130.1| transport system integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291436507|ref|ZP_06575897.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291339402|gb|EFE66358.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 296

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 87/226 (38%), Gaps = 10/226 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + D+V        L  Y   +  R L     +LL       L A+ + +   +
Sbjct: 70  KLPSPGAVWDVVRQAWLQGELLGYIWTSVSRGLLGFFFALLIGTPLGLLVARVKFVRAAI 129

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++                   I    V ++   +   +  
Sbjct: 130 GPILSGLQSLPSVAWVPPAVIWLGLNNQMMYA--------VILLGAVPSIANGLVSGVDQ 181

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG V  +    +  W  ++A+E+I       
Sbjct: 182 VPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFPD 239

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
              G+G  +       D+  +  A+L +L V    D L+F P+  W
Sbjct: 240 LGVGLGQLLENGRNASDMAMVFEAILLILTVGIAIDLLIFSPLERW 285



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R ++    A +I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 88  GELLGYIWTSVSRGLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 147

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       N  +  +++ G    I   +++G    P  F     +   TG +   +
Sbjct: 148 AVIWLGL----NNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWH 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV G       +W + + +E+ +         GLG  +           V 
Sbjct: 204 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 261

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +L++    +A++  ++ PL  +  R
Sbjct: 262 EAILLILTVGIAIDLLIFSPLERWVLR 288


>gi|307151011|ref|YP_003886395.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306981239|gb|ADN13120.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 262

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 103/273 (37%), Gaps = 17/273 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           + N        +I P I  L   ++   +  I     +    P  ++           L 
Sbjct: 1   MKNRKLNLKYDKILPWIIPLTLIIIWQILSQIGWISTRVLPAPTAVIQAAIDLTRSGELF 60

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ S +  R L+  +I     F+   +    R    +    + ++++IP L  +   +++
Sbjct: 61  KHLSISAGRALTGFLIGGSIGFILGLVNGAFRTCEHLFDTSVQMLRNIPHLAMIPLVILW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F    P        A IF +    ++ +  + +  +  + + L E+ R + L  W+ F  
Sbjct: 121 FGIGDP--------ARIFLVAIGVLFPIYINTFHGIRTVDQGLLEMGRIYGLKPWELFTQ 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P +MP ++  +  ++   W  ++ +E I          GIG     A +      ++
Sbjct: 173 IIFPSAMPSILVGVRYALGIMWLTLIVAETIASDS------GIGYMAMNAREFMQTDVVV 226

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNKFRL 272
           +++L    +  L D   + L   ++ W   +++
Sbjct: 227 FSILMYALLGKLADEVARFLEFKLLQWHPSYQV 259



 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 340 VSYMLDIFWFCV--VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +   L I W  +  +  ++  +       I           +     I+  R +   +I 
Sbjct: 18  IPLTLIIIWQILSQIGWISTRVLPAPTAVIQAAIDLTRSGELFKHLSISAGRALTGFLIG 77

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I   +G+  G             Q+L   P     PLV+          +     L+ 
Sbjct: 78  GSIGFILGLVNGAFRTCEHLFDTSVQMLRNIPHLAMIPLVILWFGIG----DPARIFLVA 133

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + I  N   G         E+   + +  W  +  II P   P  + G   A G  
Sbjct: 134 IGVLFPIYINTFHGIRTVDQGLLEMGRIYGLKPWELFTQIIFPSAMPSILVGVRYALGIM 193

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFL- 573
           W   IV+E  +        +G+G     + E      VV  +L+        +   RFL 
Sbjct: 194 WLTLIVAETIA------SDSGIGYMAMNAREFMQTDVVVFSILMYALLGKLADEVARFLE 247

Query: 574 -----WHPLYLYGT 582
                WHP Y    
Sbjct: 248 FKLLQWHPSYQVAA 261


>gi|78060617|ref|YP_367192.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77965167|gb|ABB06548.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 284

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 17/258 (6%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +  +  +P      +  R   + R+      L   +   +  ++   W       A  
Sbjct: 4   TAARDDTLAPRRPASSRAVRRDPLRRWRIAGLALPFAALALLEVVVRQGWLPSHLVPAPS 63

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
               ++  +        V  V      +  RV       + + + VG  +G    I +  
Sbjct: 64  EILDTLARL-------GVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALF 116

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P  Q L A P+  + P+++  +             L+  G  + +   V+AG       
Sbjct: 117 EPTFQALRAIPSLAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRDVDRK 172

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+ + + +     +R I+LP   P  VTG  T    AW   + +E+ +       T G
Sbjct: 173 LVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRG 226

Query: 539 LGAYIAESTEKGSFPEVV 556
           LG  +++  E G    V 
Sbjct: 227 LGFLLSDGRETGRPDLVF 244



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 93/231 (40%), Gaps = 18/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P +I+D +   L V  + ++   +TLR+ +          V       SRR+  +  P
Sbjct: 60  PAPSEILDTLA-RLGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEP 118

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
               +++IP L ++   +++            E   I  I     + +  ++   + ++ 
Sbjct: 119 TFQALRAIPSLAWVPVLLLWLGID--------EAPKITLIAIGAFFPVHLAVVAGIRDVD 170

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R L E+   +RL     F  + +P ++P +V  +   +S  W F+VA+E+I         
Sbjct: 171 RKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------AT 224

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNKF 270
            G+G  ++   +      +  A+L +  +  L D  + R     + W + F
Sbjct: 225 RGLGFLLSDGRETGRPDLVFGAILLLALLGKLTDGAMARVESHWLGWRDAF 275


>gi|119944387|ref|YP_942067.1| glycine betaine ABC transporter, binding protein inner membrane
           component [Psychromonas ingrahamii 37]
 gi|119862991|gb|ABM02468.1| glycine betaine ABC transporter, binding protein inner membrane
           component [Psychromonas ingrahamii 37]
          Length = 356

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 19/235 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +L++ +I   L G +             I + +      A  T   +++++    L  
Sbjct: 103 IMLLILALIAWQLAGPRMGITSL----FSLIIIGLVGAWSQAMVTLALVMTSVFFCFLMG 158

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A+S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA  
Sbjct: 159 LPLGIWLARSQSAAKIIRPMLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 213

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +P +L E   +F  S  Q  + + +P +MP ++  +  ++   
Sbjct: 214 ---LPPIVRLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLS 270

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI VG       G+G  +   I   D+       L ++ +  L D++
Sbjct: 271 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 318



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++  +   IAWQ  G  +   +   ++ +  +G      +T+  V+  +    ++ +P+G
Sbjct: 103 IMLLILALIAWQLAGPRMGITSLFSLIIIGLVGAWSQAMVTLALVMTSVFFCFLMGLPLG 162

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW+      +  I+P    +   PA V+   +V          N+   ++ I      I+
Sbjct: 163 IWLARSQSAAKIIRPMLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 218

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              I G    P +  E   +F  +  +    I LP   P  + G       + +  +++ 
Sbjct: 219 RLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLSMVVIAS 278

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + + G       GLG  +     +       +G L +    + L+R 
Sbjct: 279 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 318


>gi|291518791|emb|CBK74012.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Butyrivibrio fibrisolvens 16/4]
          Length = 253

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 12/220 (5%)

Query: 340 VSYMLDIFWFCV--VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           + +++ + WF    +  ++  I  +                +      ++ RVV    IA
Sbjct: 14  IPFLIVVAWFYATTINNMSGAILPKISDVFTAFRNLTQKGQLQQDIIASLIRVVQGYAIA 73

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S++ I +G   G  P I   I P A  +   P   + PL++       L+      ++++
Sbjct: 74  SVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLIILWCGIGELSK----VVVIV 129

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               + I+ N ++G S+  +   EVAS + +  W  +  + LP   P  + G     G +
Sbjct: 130 IAATFPIMINTMSGVSSTSDLLLEVASLYKLGKWETFLKVYLPNALPSILVGLKLGMGAS 189

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           W A + +E+         ++G+G  + ++       +V+L
Sbjct: 190 WMAVVAAEMLG------ASSGIGYRLNDARSMLKSDQVIL 223



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 93/252 (36%), Gaps = 22/252 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPR-----DIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
                +I +       I   +        D+            L Q    + +R++    
Sbjct: 12  FIIPFLIVVAWFYATTINNMSGAILPKISDVFTAFRNLTQKGQLQQDIIASLIRVVQGYA 71

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+ +       LA     +  +++P    ++ +PI+ ++   +++            EL+
Sbjct: 72  IASVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLIILWCGIG--------ELS 123

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  I  +  + +  +    + +    L EV+  ++L  W+ F  + +P ++P ++  + 
Sbjct: 124 KVVVIVIAATFPIMINTMSGVSSTSDLLLEVASLYKLGKWETFLKVYLPNALPSILVGLK 183

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + M   W  VVA+EM+          GIG  +  A        ++  ++ +  +    D 
Sbjct: 184 LGMGASWMAVVAAEMLGASS------GIGYRLNDARSMLKSDQVILCIILIGFIGIGTDW 237

Query: 258 LL---FRPMIVW 266
           LL   F+ +  W
Sbjct: 238 LLSKFFKKITPW 249


>gi|242278292|ref|YP_002990421.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
 gi|242121186|gb|ACS78882.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 285

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +  A+ ISLL         A+S R+  ++ PILD MQ++P   +L   ++ F 
Sbjct: 94  TMMTLALVTGAVAISLLVGIPVGIWMARSDRVETIIKPILDAMQTMPSFVYLIPVMMLFG 153

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++ A+FA     +  +       +  +P+D+ E +R+F  +  Q  + + 
Sbjct: 154 LG--------KVPALFATIIYSMPPIIRLTNVGIREVPKDVIEAARAFGATPMQTLFKVQ 205

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +V  +  +       VV + MI          G+G  + +AI   D+     A
Sbjct: 206 LPLARPTIVVGINQTTMMALAMVVVASMI-------GAKGLGMEVLVAINRIDIGMGFEA 258

Query: 245 MLTMLGVIFLYDQL 258
            L+++ +  + D+L
Sbjct: 259 GLSIVFLAIIIDRL 272



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 18/237 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLII 395
           + L I WF ++ GV   + W  +G          +L+VI       L  +T+  V   + 
Sbjct: 48  FFLMIPWFVMIIGVG-AVGWWLLGSWKRGLGMSAMLFVIGCFGYWKLTMMTLALVTGAVA 106

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ ++ IPVGIW+     + + I+P    +   P+ V+   V+           +     
Sbjct: 107 ISLLVGIPVGIWMARSDRVETIIKPILDAMQTMPSFVYLIPVMMLFGLG----KVPALFA 162

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I  +   I+     G    P D  E A +F  T  +    + LP   P  V G      
Sbjct: 163 TIIYSMPPIIRLTNVGIREVPKDVIEAARAFGATPMQTLFKVQLPLARPTIVVGINQTTM 222

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A    +V+ +           GLG  +  +  +          L +    + ++R 
Sbjct: 223 MALAMVVVASMIG-------AKGLGMEVLVAINRIDIGMGFEAGLSIVFLAIIIDRL 272


>gi|186472306|ref|YP_001859648.1| choline ABC transporter, permease protein [Burkholderia phymatum
           STM815]
 gi|184194638|gb|ACC72602.1| choline ABC transporter, permease protein [Burkholderia phymatum
           STM815]
          Length = 301

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+F       AAK++ + MV+ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTLISLVFGIPLGIWAAKNKHVQMVVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 74/244 (30%), Gaps = 11/244 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E+F  +  +   +  +       +      + W+   +                  IT+ 
Sbjct: 34  ESFAAMIEHGLQAVPMWALMALFIAVGLWRVGWRFAIFATASLLLIYATGFWDQTVITLG 93

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   +I+ +  IP+GIW     H+   ++P   L+   PA V+            +  
Sbjct: 94  LTLSSTLISLVFGIPLGIWAAKNKHVQMVVRPILDLMQTMPAFVYLIPAAMLFGLGRVPG 153

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +  +             G      +  E   +F  T W+    +  P   P  + 
Sbjct: 154 ILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQ 209

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       A +  I++ +   G       GLG  +  S ++          L +    + 
Sbjct: 210 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAII 262

Query: 569 LNRF 572
           L+R 
Sbjct: 263 LDRI 266


>gi|167915554|ref|ZP_02502645.1| permease component of taurine ABC transporter [Burkholderia
           pseudomallei 112]
          Length = 247

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+     +A +  IPVGI +     +   + P  +     P   + PL+V     
Sbjct: 55  LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 114

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AGAS         A+S   T  +  R+++LP   
Sbjct: 115 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 170

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T GLG  +  ++       V+ G+L++ 
Sbjct: 171 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 224

Query: 564 CFVLALN---RFLWHPLYLY 580
              LAL    R L   L  +
Sbjct: 225 AIALALEIGLRALQRRLTPW 244



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  +L ++   +  R+ +A  ++++       L A +R +  V+ PI++  + IP L 
Sbjct: 44  GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 103

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   VV+F           + + I  I+ +    +  +       +       + S   
Sbjct: 104 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 155

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q   ++ +P ++P ++  + +++  GW  +VA+E+I          G+G  +  A +
Sbjct: 156 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 209

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                 ++  +L +  +    +   + L R +  W
Sbjct: 210 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 244


>gi|163760699|ref|ZP_02167779.1| putative permease protein [Hoeflea phototrophica DFL-43]
 gi|162282021|gb|EDQ32312.1| putative permease protein [Hoeflea phototrophica DFL-43]
          Length = 281

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 102/232 (43%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ I+ +L+     +        +V I + +  + +   +T      A V++++F   
Sbjct: 47  PIILAIVAVLVWLASRSWKIVVGSIVVLIAIGLFGMWEDTMKTIAMTFVATVLAIIFGIP 106

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                ++S R+  +  PILDIMQ++P   +L   ++ F     GKV G     I+AI   
Sbjct: 107 IGIGMSRSNRVQSIFNPILDIMQTMPSFVYLIPVIMLFG---IGKVPGLIAVIIYAIP-- 161

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + +D+ E + +F  S WQ+   + +P ++P ++  +  ++     
Sbjct: 162 ---PIIRLTNLGIRLVDKDVLEAADAFGSSNWQRLKNVQMPLALPTIMAGINQTIMMALA 218

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + M+ V        G+G  +  AI  Q     +   L ++GV  ++D+
Sbjct: 219 MVVVASMVGV-------QGLGQQVLRAINNQYFTLGVLNGLAIVGVAIIFDR 263



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 74/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    I     V       +W+ +   +       +  +      T+    V  ++A I 
Sbjct: 44  TPWPIILAIVAVLVWLASRSWKIVVGSIVVLIAIGLFGMWEDTMKTIAMTFVATVLAIIF 103

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI +     + S   P   ++   P+ V+   V+           +   + +I   
Sbjct: 104 GIPIGIGMSRSNRVQSIFNPILDIMQTMPSFVYLIPVIMLFGIG----KVPGLIAVIIYA 159

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+     G      D  E A +F  + W+  + + +P   P  + G       A   
Sbjct: 160 IPPIIRLTNLGIRLVDKDVLEAADAFGSSNWQRLKNVQMPLALPTIMAGINQTIMMALAM 219

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +V+ +           GLG  +  +     F   VL  L +    +  +R
Sbjct: 220 VVVASMVG-------VQGLGQQVLRAINNQYFTLGVLNGLAIVGVAIIFDR 263


>gi|325846755|ref|ZP_08169670.1| glycine betaine transport system permease protein opuAB
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481513|gb|EGC84554.1| glycine betaine transport system permease protein opuAB
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 280

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 18/246 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLRM 72
           +F  IF +   +L I ++  L + + +      I  I+ + L + +L  +     T   +
Sbjct: 41  LFIKIFSVFPPLLFIILVAALAYYLTKKIKGITIFSILSLLL-IWNLDYWDDMVITLSIV 99

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +++ +++++         +KS  +  V++P+LD MQ++P   +L   V +F     G   
Sbjct: 100 VTSALLAIIIGIPLGIWTSKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFG---IGMAP 156

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   + IFA+  +            +  +P DL E + SF  +  QK + L +P + P +
Sbjct: 157 GVISSVIFAMPPA-----VRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSI 211

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++      VV + MI         PG+G+ I  ++   D+     + + ++ + 
Sbjct: 212 MAGINQTLMLTLSMVVVASMI-------GAPGLGNVIYTSVSRNDVGVGFASGIAIVILA 264

Query: 253 FLYDQL 258
            + D+L
Sbjct: 265 VILDRL 270



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 74/230 (32%), Gaps = 14/230 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIG---YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +  +V  +A  +  +  G   + +        L       IT+  VV   ++A II I
Sbjct: 52  LLFIILVAALAYYLTKKIKGITIFSILSLLLIWNLDYWDDMVITLSIVVTSALLAIIIGI 111

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW      +   I P    +   PA V+    VS          +   +        
Sbjct: 112 PLGIWTSKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPGVISSVIF----AMP 167

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P+D  E A SF  T  +    + LP   P  + G         +  +
Sbjct: 168 PAVRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLSMVV 227

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V+ +           GLG  I  S  +          + +    + L+R 
Sbjct: 228 VASMIG-------APGLGNVIYTSVSRNDVGVGFASGIAIVILAVILDRL 270


>gi|238783149|ref|ZP_04627175.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC
           43970]
 gi|238715945|gb|EEQ07931.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC
           43970]
          Length = 255

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++ +  A  + +P GI +G    + + + P  ++    P   + PL+V     
Sbjct: 61  AASLGRILIALFAAVALGVPTGIAMGLSRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +    +AG  +        A +   + W+  R+++LP   
Sbjct: 121 GETSK----ILLIYLAIFAPVTLAAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 177 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 230

Query: 564 CFVLALN---RFLWHPLYLY 580
                +    R +   L  +
Sbjct: 231 IIAFGMELSLRAIQRRLTPW 250



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 104/248 (41%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V  + +I+ L     +  + + +V   P      +L Q+ + +  R+L A+  ++ 
Sbjct: 17  LWWLVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALFAAVA 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SRR+  VL P+++I + +P L +L   V++F           E + I  
Sbjct: 77  LGVPTGIAMGLSRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +T +    + ++       +++   S WQ   ++ +P ++P ++  + + + 
Sbjct: 129 IYLAIFAPVTLAAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSALPEILTGIRIGLG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
            GW  +VA+E+I          G+G  +  A +      ++  +  +  + F   L  + 
Sbjct: 189 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 242

Query: 259 LFRPMIVW 266
           + R +  W
Sbjct: 243 IQRRLTPW 250


>gi|167031281|ref|YP_001666512.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857769|gb|ABY96176.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 265

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    QR++             +A+   W S   +                  +  
Sbjct: 2   SRATSSNLAQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   I + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S         G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y    +
Sbjct: 232 YAVLGKLADLAARGLERVWLRWHPAYQVAKK 262



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 105/271 (38%), Gaps = 17/271 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R+ P    +L        ++      +    P  +V      +    +  + + +  
Sbjct: 9   LAQRLAPWALPVLLLAAWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGW 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI      V   +   S     +L   + +++++P L  +   +++F       
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 125 ----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 181 SILVGVRFALGFMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
           +  L D   + L R  + W   +++ +  G 
Sbjct: 235 LGKLADLAARGLERVWLRWHPAYQVAKKEGA 265


>gi|296269359|ref|YP_003651991.1| binding-protein-dependent transporter inner membrane component
           [Thermobispora bispora DSM 43833]
 gi|296092146|gb|ADG88098.1| binding-protein-dependent transport systems inner membrane
           component [Thermobispora bispora DSM 43833]
          Length = 277

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 17/257 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------DV 376
            +  P         +R+   +      ++  VA          +    T           
Sbjct: 14  PWAGPRPRGWRLPGKRLQRWISPIAVLLIWQVASSTGLLPARLLAAPSTIAATAVELIQT 73

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ RV+V     ++  I + +  G      + + P  Q++   P     PL
Sbjct: 74  GTLPAAISVSLQRVLVGFTAGAVAGIGLALIAGLSRAGENAVDPLMQMIRTLPFFGLIPL 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +               LL+       +  N  AG         EVA +  ++  +  R+
Sbjct: 134 FILWFGIGET----PKVLLVALAVSVPLYLNTFAGIRGVDGKLAEVAQTLKLSRAQLIRH 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LPG  P  + G   + G AW A IV+E  +         GLG  I ++ E      VV
Sbjct: 190 IVLPGALPQTLVGLRQSLGVAWLALIVAEQIN------ADAGLGFMINDAREFLRTDVVV 243

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L+     L  +  +
Sbjct: 244 VGLLVYSALGLLTDALV 260



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 99/252 (39%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +L+  + +   L   +    P  I       +   +LP   S +  R+L       +
Sbjct: 37  IAVLLIWQVASSTGLLPARLLAAPSTIAATAVELIQTGTLPAAISVSLQRVLVGFTAGAV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +A  SR     + P++ +++++P  G +   +++F      KV+   LA    
Sbjct: 97  AGIGLALIAGLSRAGENAVDPLMQMIRTLPFFGLIPLFILWFGIGETPKVLLVALAVSV- 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L EV+++ +LS  Q   ++ +P ++P  +  +  S+ 
Sbjct: 156 -------PLYLNTFAGIRGVDGKLAEVAQTLKLSRAQLIRHIVLPGALPQTLVGLRQSLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          G+G  I  A +      ++  +L    +  L D   +L
Sbjct: 209 VAWLALIVAEQI------NADAGLGFMINDAREFLRTDVVVVGLLVYSALGLLTDALVRL 262

Query: 259 LFRPMIVWSNKF 270
           L R  + W   F
Sbjct: 263 LERRALSWRRGF 274


>gi|118469424|ref|YP_888145.1| aliphatic sulfonates transport permease SsuC [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170711|gb|ABK71607.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 263

 Score =  116 bits (290), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  RVV+ +++  +I + +G  +G    + + + P  Q++ A P     PL +      
Sbjct: 73  VSGARVVIGLLLGGVIGVALGTAVGLSRWLEATVDPPMQMIRALPHLGLIPLFIVWFGIG 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L       LL+  G  + +  N  +          E A     + W+ +R II+P   P
Sbjct: 133 ELPK----VLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRTIIVPSAAP 188

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   +   AW   IV+E  +        +G+G  I  + +      ++ G+++   
Sbjct: 189 QVLVGFRQSLAIAWLTLIVAEQIN------ADSGIGFLINNARDFLRIDIIIFGLIVYAL 242

Query: 565 FVLALNRFL 573
             +  +  +
Sbjct: 243 LGIGTDAIV 251



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 100/250 (40%), Gaps = 16/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVISLL 81
           +  + +  + + +    Q+      ++    I L  +     A R +  R++  +++  +
Sbjct: 28  VVLLGLWQLGSAVGLISQDVLPAPSLIVEAGIELIRNGQLADALRVSGARVVIGLLLGGV 87

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                 T    SR L   + P + +++++P LG +   +V+F           EL  +  
Sbjct: 88  IGVALGTAVGLSRWLEATVDPPMQMIRALPHLGLIPLFIVWFGIG--------ELPKVLL 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + + ++  +   L E ++    S WQ+F  + VP + P ++     S++
Sbjct: 140 VALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRTIIVPSAAPQVLVGFRQSLA 199

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ +E I          GIG  I  A     +  I++ ++    +    D ++ R
Sbjct: 200 IAWLTLIVAEQINADS------GIGFLINNARDFLRIDIIIFGLIVYALLGIGTDAIV-R 252

Query: 262 PMIVWSNKFR 271
            +   + ++R
Sbjct: 253 ALERRALRYR 262


>gi|226366243|ref|YP_002784026.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244733|dbj|BAH55081.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 285

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 85/243 (34%), Gaps = 11/243 (4%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI- 385
           +    +++ S         +     V          ++  +V+ F  Q    + +L    
Sbjct: 31  WRSRLVRIASVLGAILAWQLLTAHDVRLWLRFDTLPTVTDVVSAFGTQLRTDLFYLDLGQ 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++    +A+I+ +  GI +G     +  + P  +L    PA    P+ +       
Sbjct: 91  SLIRILSGFGLATIVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLFP--- 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + I+ +      A P  +++   +     W     ++LPGI P 
Sbjct: 148 -SDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLARVVLPGILPG 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G AW   I +E+ S         G+G    ++     +P V +G++ +   
Sbjct: 207 VFGGLSVGIGVAWICVISAEMISGRL------GVGYRTWQAYTIVDYPGVFVGMITIGIL 260

Query: 566 VLA 568
              
Sbjct: 261 GFL 263



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             ++ +R+LS   ++ +          +S     VL P+ ++ + IP +  +   ++ F 
Sbjct: 88  LGQSLIRILSGFGLATIVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLF- 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +F  F +  + +  S   ++  +P   E+  R+     W     + 
Sbjct: 147 -------PSDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLARVV 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +PG+   + + +   W  V+++EMI          G+G     A    D   +   
Sbjct: 200 LPGILPGVFGGLSVGIGVAWICVISAEMISG------RLGVGYRTWQAYTIVDYPGVFVG 253

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNK 269
           M+T+  + FL     +LL R +  W  +
Sbjct: 254 MITIGILGFLTSGAVELLGRRVTRWLPR 281


>gi|330961928|gb|EGH62188.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        +   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIITTVVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           +L +  + ++  +  GIAW +   I+       +L+++    +      T+  ++V  II
Sbjct: 46  LLRMAPWWLMLIIVGGIAWHATRKIITTVVIVGLLFLVGAVGLWDKLMQTLALMLVATII 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+GI       + S + P   ++   P+ V+   V+           +      
Sbjct: 106 AVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG----KVPAIFAT 161

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      ++     G      +  E  ++F    W+    + LP   P  + G       
Sbjct: 162 VIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMM 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 222 ALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270


>gi|307151917|ref|YP_003887301.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982145|gb|ADN14026.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 302

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     +++RV V   +ASI+ IP+GI +G    I + ++P   L+   PA  F PL+
Sbjct: 102 ELLKDTVASLWRVGVGFFLASILSIPLGILMGSYATIRALLEPIFGLMRYMPAPAFIPLL 161

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            LL+  G  ++    V+      P D  E         W+    +
Sbjct: 162 ILYLGVG----EEPKILLIFIGVFFFNALMVMDTVKFVPKDLIESTYMLGGNRWQTLIQV 217

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P + P  +         AW   IVSE+ +       T GLG  I+ +       E+ +
Sbjct: 218 IFPHVVPGIIDACRINLAAAWQLVIVSELIA------STEGLGRRISVAGRFLRTDEIFV 271

Query: 558 GVLIMCCFVLALNRFL 573
           G++++    L  +   
Sbjct: 272 GLIVIGVIGLFFDLLF 287



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 89/229 (38%), Gaps = 15/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L +    +  R+     ++ + +     L      +  +L 
Sbjct: 84  LPSPAKVMEAFGRLWSTRELLKDTVASLWRVGVGFFLASILSIPLGILMGSYATIRALLE 143

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI  +M+ +P   F+   ++Y            E   I  IF    +     +  ++  +
Sbjct: 144 PIFGLMRYMPAPAFIPLLILYLGVG--------EEPKILLIFIGVFFFNALMVMDTVKFV 195

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+DL E +     + WQ    +  P  +PG++    ++++  W  V+ SE+I        
Sbjct: 196 PKDLIESTYMLGGNRWQTLIQVIFPHVVPGIIDACRINLAAAWQLVIVSELIA------S 249

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  I++A +      I   ++ +  +   +D LLF+ ++  S ++
Sbjct: 250 TEGLGRRISVAGRFLRTDEIFVGLIVIGVIGLFFD-LLFQYLLRVSCQW 297


>gi|86748613|ref|YP_485109.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86571641|gb|ABD06198.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 280

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 79/201 (39%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R++V   +A ++ IP+G+ +G      + + P  +     P    + L+V  +    
Sbjct: 89  SLYRILVAFALACLVGIPLGVLMGASRDARALLNPMIEFYRPLPPLGLYTLLVMWLGIGE 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+       I+ + I   +     +   A S   +       + LP   P 
Sbjct: 149 TSKLS----LLFLAGLPGIVISTIQAVTTIDRIYIRAAQSLGASRRDLLFEVYLPAAGPM 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   + G  +   + +E+ +       + GLG  I ++ +      V++G++++   
Sbjct: 205 ILAGMRISLGFTYTVLVAAEIVA------ASAGLGWMIWDAAKFLMSDIVIMGLIVLGLT 258

Query: 566 VLALN---RFLWHPLYLYGTR 583
            +AL+   R +   L  +  R
Sbjct: 259 GVALDFAMRLVGRVLMPWTNR 279



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+L A  ++ L       L   SR    +L P+++  + +P LG  T 
Sbjct: 80  STLLEHVGTSLYRILVAFALACLVGIPLGVLMGASRDARALLNPMIEFYRPLPPLGLYTL 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++       K+          +F + +  +  S  Q++  I R     ++S   S   
Sbjct: 140 LVMWLGIGETSKLS--------LLFLAGLPGIVISTIQAVTTIDRIYIRAAQSLGASRRD 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P + P ++  M +S+   +  +VA+E++          G+G  I  A K    
Sbjct: 192 LLFEVYLPAAGPMILAGMRISLGFTYTVLVAAEIVAASA------GLGWMIWDAAKFLMS 245

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             ++  ++ +       D   +L+ R ++ W+N+
Sbjct: 246 DIVIMGLIVLGLTGVALDFAMRLVGRVLMPWTNR 279


>gi|213968669|ref|ZP_03396811.1| sulfonate ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301384601|ref|ZP_07233019.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061735|ref|ZP_07253276.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato K40]
 gi|302134904|ref|ZP_07260894.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926602|gb|EEB60155.1| sulfonate ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 285

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALMTGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ AG         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFAGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALMTGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFAGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|257483860|ref|ZP_05637901.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330891839|gb|EGH24500.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330987240|gb|EGH85343.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   IV       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|284009253|emb|CBA76363.1| glycine betaine/L-proline ABC transporter, permease protein
           [Arsenophonus nasoniae]
          Length = 308

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVD-IVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L      + II+  L   Q       +   I  + +        A  T   +L+++   L
Sbjct: 48  LTTLPATLIIISFALLAWQLANKKVAVATFISLVFIGAIGAWSEAMITLSLVLTSLFFCL 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A S+    ++ P+LD MQ+ P   +L   V+ F     G V G  +  IF
Sbjct: 108 LIGLPLGIWLANSKPASQIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGIVVTIIF 164

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  +P DL E + SF  S  Q  + + +P + P ++  +  ++
Sbjct: 165 A-----LPPIIRLTILGIRQVPDDLIEAAESFGASRNQLLFKVQLPLAAPTIMAGVNQTL 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI VG       G+G  +   I   D+         ++ +  + D+L
Sbjct: 220 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGTGIVILAIILDRL 270



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 88/240 (36%), Gaps = 16/240 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVV 392
            R   +L      ++      +AWQ     V   T+  ++++  +G      IT+  V+ 
Sbjct: 42  SRFEQILTTLPATLIIISFALLAWQLANKKVAVATFISLVFIGAIGAWSEAMITLSLVLT 101

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +    +I +P+GIW+      S  I+P    +   PA V+   +V          N+  
Sbjct: 102 SLFFCLLIGLPLGIWLANSKPASQIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPG 157

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++ I      I+   I G    P+D  E A SF  +  +    + LP   P  + G   
Sbjct: 158 IVVTIIFALPPIIRLTILGIRQVPDDLIEAAESFGASRNQLLFKVQLPLAAPTIMAGVNQ 217

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               + +  +++ + + G       GLG  +     +       +G   +    + L+R 
Sbjct: 218 TLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGTGIVILAIILDRL 270


>gi|332561409|ref|ZP_08415722.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
 gi|332273911|gb|EGJ19229.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
          Length = 313

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L++ +      G     V   +V +  ++ D  SL   A  T   + +A+ + ++
Sbjct: 62  TVMLLLIVLVAWQAAGGRVALVVAAALVALGLLSPDAWSL---AMTTLAIVNAAVALCVI 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA KS R    + P LD MQ+IP   +L   V+       G V G  +  IFA
Sbjct: 119 IGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYLVPVVMLLG---IGNVSGVIVTIIFA 175

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +       + N+   + E +R+F  +  Q  + + +P + P ++  +  ++ 
Sbjct: 176 -----LPPLVRLTSLGIRNVNPGVVEAARAFGATPRQILFKVELPLATPTILAGLNQTIM 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI V        G+G+ +  A+   D    +   L ++ +  + D++
Sbjct: 231 LSLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRV 280



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 24/293 (8%)

Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338
            P  S  L +  +T+ ++    ++     P+ +    L   +  +    P   +      
Sbjct: 11  DPFRSIDLDIDGRTDGIKQWAIANRTALQPIKSFFDGLIGWIENLMQSIPPTVM------ 64

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
                  +    +V   A G     +                 L   T+  V   + +  
Sbjct: 65  -------LLLIVLVAWQAAGGRVALVVAAALVALGLLSPDAWSLAMTTLAIVNAAVALCV 117

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II +P+G+  G      + ++PF   +   PA V+   VV  +   +++  +   +    
Sbjct: 118 IIGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYLVPVVMLLGIGNVSGVIVTIIF--- 174

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G         E A +F  T  +    + LP   P  + G       + 
Sbjct: 175 -ALPPLVRLTSLGIRNVNPGVVEAARAFGATPRQILFKVELPLATPTILAGLNQTIMLSL 233

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +  +++ + S         GLG  +  +  +    + ++G L +    + L+R
Sbjct: 234 SMVVIASMIS-------VKGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDR 279


>gi|298489261|ref|ZP_07007278.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156225|gb|EFH97328.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           +L +  + ++  +  GIAW +   IV       +L+++    +      T+  ++V  II
Sbjct: 46  LLRMAPWWLMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATII 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+GI       + S + P   ++   P+ V+   V+           +      
Sbjct: 106 AVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG----KVPAIFAT 161

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      ++     G      +  E  ++F    W+    + LP   P  + G       
Sbjct: 162 VIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMM 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 222 ALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270


>gi|254486686|ref|ZP_05099891.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043555|gb|EEB84193.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 264

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 83/242 (34%), Gaps = 10/242 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P+    +     V  +L   W      ++     +    ++      D   +      ++
Sbjct: 17  PKRRRGMGLLVFVLLILLAEWGTRTGFISNLTLPRPSDVVLTFVELWDSGLLFKHLIPSL 76

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+ V   I + I I VG+ IG   ++ + + P    L   P     PL V         
Sbjct: 77  SRLAVGATIGASIGIAVGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI---- 132

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ FGT    +    A           +  SF +T W   R I+LPG  P  +
Sbjct: 133 DEASKFALIAFGTFTPTVVATYAAVDNVDRSLIRMGQSFGLTWWSIVRKIVLPGAMPGIL 192

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   +   A    + +E+           G+GAYI E+        +  GV+I+    +
Sbjct: 193 SGLRISLAIAIILLVAAEMLG------AEYGIGAYILEAGSLYDLERLFAGVVILSVLGV 246

Query: 568 AL 569
            +
Sbjct: 247 GV 248



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 14/212 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V       D   L ++   +  R+     I          +      +   LV
Sbjct: 49  LPRPSDVVLTFVELWDSGLLFKHLIPSLSRLAVGATIGASIGIAVGVMIGLFSYVRAGLV 108

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E +    I          + Y ++ N+
Sbjct: 109 PLVAALFPIPKIALLPLFVIWFGID--------EASKFALIAFGTFTPTVVATYAAVDNV 160

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF L+ W     + +P +MPG++  + +S++     +VA+EM+        
Sbjct: 161 DRSLIRMGQSFGLTWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------A 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             GIG+YI  A    DL  +   ++ +  +  
Sbjct: 215 EYGIGAYILEAGSLYDLERLFAGVVILSVLGV 246


>gi|300786900|ref|YP_003767191.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299796414|gb|ADJ46789.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 272

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 13/261 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFT 372
           L R              +    + +S ++ +  + +V    +            +     
Sbjct: 9   LTRARKRAAEPPRTAVRRPDLRRWISPVVLLAAWQLVSATGVLPPDKLSAPWTVVQAGLE 68

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +     +++ RV     + ++  + +GI  G      + + P  Q+L   P   
Sbjct: 69  AARSGELGDAFAVSLGRVGAGFALGAVAGVLLGIVSGLSRWGEALVDPPVQMLRTLPFLG 128

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +               +L+  G  + +  NV +G         E + S   +   
Sbjct: 129 LIPLFILWFGIG----EETKIVLVALGVAFPLYLNVHSGIRGADPALVEASRSLGFSRAE 184

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              ++++PG  P  + G   + G AW A IV E  +         G+G  I  + E    
Sbjct: 185 RLWHVVVPGALPQALVGLRQSLGLAWLALIVGETVN------ADAGVGYLINNAREFLRT 238

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             VV+G+++     L  +  +
Sbjct: 239 DVVVVGLVLYALLGLVTDALV 259



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 93/232 (40%), Gaps = 17/232 (7%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           + + P  +V           L    + +  R+ +   +  +   +   ++  SR    ++
Sbjct: 55  KLSAPWTVVQAGLEAARSGELGDAFAVSLGRVGAGFALGAVAGVLLGIVSGLSRWGEALV 114

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P + +++++P LG +   +++F           E   I  +     + +  +++  +  
Sbjct: 115 DPPVQMLRTLPFLGLIPLFILWFGIG--------EETKIVLVALGVAFPLYLNVHSGIRG 166

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
               L E SRS   S  ++ W++ VP ++P  +  +  S+   W  ++      VG+TV 
Sbjct: 167 ADPALVEASRSLGFSRAERLWHVVVPGALPQALVGLRQSLGLAWLALI------VGETVN 220

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
              G+G  I  A +      ++  ++    +  + D   +LL R ++ W  +
Sbjct: 221 ADAGVGYLINNAREFLRTDVVVVGLVLYALLGLVTDALVRLLERKVLRWRTR 272


>gi|119387727|ref|YP_918761.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378302|gb|ABL73065.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 289

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 83/261 (31%), Gaps = 10/261 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L R                     V+ +L      +   +   +       + +
Sbjct: 19  AEPADALVRLTPATARGRQVPRWLRRGIGPVALVLVWHLASITGVLPAEVLAGPATVLSS 78

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    +     ++M R +  ++I   I + + I  G        +    Q+L   P
Sbjct: 79  AAKLIQTGELQEAVVVSMQRAMSGLLIGGTIGVALAILSGLTRLGEDLVDAPMQMLRTVP 138

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                PL++                L+   T + +  NV AG         E   +  + 
Sbjct: 139 NVALIPLLIIWFGIGEA----PKIALIALATAFPLYLNVYAGIRGVDQSLIEAGRTLGLG 194

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                R++ILPG  P  + G   + G AW A +  E  +       T G+G  +A + E 
Sbjct: 195 RAGLVRHVILPGALPNALVGLRYSLGIAWLALVFGEQIN------ATAGVGYLMANAREF 248

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
                +V+ +++     LA++
Sbjct: 249 FQTDVIVVCLVVYALLGLAVD 269



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 95/252 (37%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A VLV  + +I      E    P  ++      +    L +    +  R +S ++I   
Sbjct: 49  VALVLVWHLASITGVLPAEVLAGPATVLSSAAKLIQTGELQEAVVVSMQRAMSGLLIGGT 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L+  +R    ++   + +++++P +  +   +++F           E   I  
Sbjct: 109 IGVALAILSGLTRLGEDLVDAPMQMLRTVPNVALIPLLIIWFGIG--------EAPKIAL 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  ++Y  +  + + L E  R+  L       ++ +P ++P  +  +  S+ 
Sbjct: 161 IALATAFPLYLNVYAGIRGVDQSLIEAGRTLGLGRAGLVRHVILPGALPNALVGLRYSLG 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  +V       G+ +    G+G  +A A +      I+  ++    +    D +   
Sbjct: 221 IAWLALV------FGEQINATAGVGYLMANAREFFQTDVIVVCLVVYALLGLAVDLVVRS 274

Query: 259 LFRPMIVWSNKF 270
           L R  + W   F
Sbjct: 275 LERIFLSWRPNF 286


>gi|323698733|ref|ZP_08110645.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323458665|gb|EGB14530.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 276

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 97/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VIG++ +L        +    +  + + +    L +    T   +LS++VI  +    
Sbjct: 52  LVVIGVVCLLAWKFSGKRLALFSLASMLL-VGFLGLWEETMITLAMVLSSVVICAVIGIP 110

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              ++ +S R    L P+LD MQ+ P   +L   V+ F            +A + A    
Sbjct: 111 LGIMSGRSERFEAGLRPVLDAMQTTPAFVYLVPIVMLFSVG--------NVAGVLATIIF 162

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  +L E +++F  + WQ    + +P +MP ++  +  ++     
Sbjct: 163 ALPPIIRLTGLGIRQVHPELVEAAQAFGATRWQVLVKVQIPLAMPTILAGLNQTIMMALS 222

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I  G       G+GS + L +   D+   +   L ++ +  + D++
Sbjct: 223 MVVIAALIGAG-------GLGSPVILGLNTLDIGRAVVGGLGIVLMAIVLDRI 268



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            VV GV   +AW+  G  +  F+   +L V +LG      IT+  V+  ++I ++I IP+
Sbjct: 52  LVVIGVVCLLAWKFSGKRLALFSLASMLLVGFLGLWEETMITLAMVLSSVVICAVIGIPL 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G      + ++P    +   PA V+   +V   S  ++   L   +         I
Sbjct: 112 GIMSGRSERFEAGLRPVLDAMQTTPAFVYLVPIVMLFSVGNVAGVLATIIF----ALPPI 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T W+    + +P   P  + G       A +  +++
Sbjct: 168 IRLTGLGIRQVHPELVEAAQAFGATRWQVLVKVQIPLAMPTILAGLNQTIMMALSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG+ +            V+G L +    + L+R 
Sbjct: 228 ALIGAG-------GLGSPVILGLNTLDIGRAVVGGLGIVLMAIVLDRI 268


>gi|312963731|ref|ZP_07778202.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
 gi|311281766|gb|EFQ60376.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
          Length = 262

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 106/267 (39%), Gaps = 17/267 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +S R+ P +  +L   +    ++      +    P  ++      +    +  + + +  
Sbjct: 6   LSHRVAPWVLPILLLAVWQLSVSAGWLSTRILPAPSAVIAAGVHLVASGEIWTHLAISGW 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     VI          +   S     +L   + +++++P L  +   +++F       
Sbjct: 66  RAGLGFVIGGSIGLALGFITGLSAWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +    ++ +  + Y  + N+   L E+SRS+ LSG+  FW + +P ++P
Sbjct: 122 ----ETAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFWQVILPGALP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A++    
Sbjct: 178 SILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVMYAI 231

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLER 274
           +  L D   + L R  + W   ++L++
Sbjct: 232 LGKLADLAARGLERVWLRWHPAYQLKK 258



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 82/241 (34%), Gaps = 17/241 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFR 389
           + RV+  +       V  +++   W S   +            +           I+ +R
Sbjct: 7   SHRVAPWVLPILLLAVWQLSVSAGWLSTRILPAPSAVIAAGVHLVASGEIWTHLAISGWR 66

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             +  +I   I + +G   G        +    Q++   P     PLV+           
Sbjct: 67  AGLGFVIGGSIGLALGFITGLSAWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DE 122

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                L+  GT + I  N   G         E++ S+ ++G+  +  +ILPG  P  + G
Sbjct: 123 TAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFWQVILPGALPSILVG 182

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A G  W   IV+E  S       ++G+G     + E      VVL +++        
Sbjct: 183 VRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVMYAILGKLA 236

Query: 570 N 570
           +
Sbjct: 237 D 237


>gi|300716105|ref|YP_003740908.1| Aliphatic sulfonates transport permease [Erwinia billingiae Eb661]
 gi|299061941|emb|CAX59057.1| Aliphatic sulfonates transport permease protein [Erwinia billingiae
           Eb661]
          Length = 263

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLL 81
              ++V  I +             + + +    L V   L Q  + ++ R      I   
Sbjct: 19  ALLIVVWQIASQTGWLSTRILPSPEAIVVTFWKLSVSGELLQNLAISSWRAAIGFGIGGS 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLVLGLITGMSRLGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTMFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 LMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 245 LERVWLRWHPAYQLKEDNA 263



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 19/215 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+ +R  +   I   I + +G+  G        +    Q+L   P     PL
Sbjct: 56  GELLQNLAISSWRAAIGFGIGGSIGLVLGLITGMSRLGERLLDTSVQMLRNVPHLALIPL 115

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  GT + I  N   G         E+A S+ ++GW  +  
Sbjct: 116 VILWFGI----DESAKIFLVALGTMFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQ 171

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P  + G   A G  W   IV+E  S       ++G+G     + E      VV
Sbjct: 172 VVLPGALPSIMVGVRFALGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVV 225

Query: 557 LGVLIMCCFVLALNR---------FLWHPLYLYGT 582
           + +++        +            WHP Y    
Sbjct: 226 VAIILYALLGKLADVSAQLLERVWLRWHPAYQLKE 260


>gi|291003437|ref|ZP_06561410.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 269

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +   +IA  I +P+G+ IG+   +S  + P  +L     A    P+ V  +  
Sbjct: 78  GASLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGL 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++F   W IL N I+G         + A S     +  +  ++LP + 
Sbjct: 138 GETSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVV 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   +    + +E+A          GLG  I  S      P++  G++ + 
Sbjct: 194 PTVFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITIS 247

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
              L  N+ L     +   R L
Sbjct: 248 LLGLGFNQAL-----VTAERRL 264



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 92/257 (35%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRM 72
           R+F +   +  F+LV  +   L         P   V      L     L ++   +  R 
Sbjct: 25  RVFRSTAGIALFLLVWELTPRLGVVDSIFLPPFSEVVRTWWELAAGGQLWEHLGASLARS 84

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+  +I++        +      +  +L P+L++ ++   L  L   V+        KV 
Sbjct: 85  LAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGETSKVS 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                    I  +  W +  +    +  +   L + +RS     +  F+ + +P  +P +
Sbjct: 145 --------LIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPTV 196

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +     +VA+EM           G+G  I  +     +  +   ++T+  + 
Sbjct: 197 FTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLLG 250

Query: 253 FLYDQLL---FRPMIVW 266
             ++Q L    R +  W
Sbjct: 251 LGFNQALVTAERRLSRW 267


>gi|320197196|gb|EFW71813.1| Taurine transport system permease protein TauC [Escherichia coli
           WV_060327]
          Length = 275

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377
            +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  +
Sbjct: 13  RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72

Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++ ++ A +I IPVGI +G  P +   + P  +L    P   + P
Sbjct: 73  DATLWQHLAASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V        +      LL+       +  + +AG  +        A S   +  +   
Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAALSLGASRAQVLW 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V
Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580
           + G+ ++      L    R L   L  +
Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 102/249 (40%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R+L A++ ++L
Sbjct: 37  VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRILLALLAAVL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L PI+++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     + S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAALSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 263 LQRRLTPWH 271


>gi|331012049|gb|EGH92105.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   IV       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|320326290|gb|EFW82343.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331710|gb|EFW87648.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872451|gb|EGH06600.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ I+  +        V   ++  +   +    L     +T   ML A +I++L     
Sbjct: 54  LMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L+A+S RL  VL+P+LDIMQ++P   +L   ++ F           ++ AIFA     
Sbjct: 114 GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E   +F  + WQ+ + + +P +MP ++  +  +       
Sbjct: 166 APPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 270



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L I  + ++  +  GIAW +   IV       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRIAPWWLMLIIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|298292114|ref|YP_003694053.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296928625|gb|ADH89434.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 284

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+     + I+   L   + TT    +  ++      +  L +   ++ + +L + + +L
Sbjct: 47  LVGLPPWLVIVLFGLLIWRLTTARIALFSMLGFAFLWNLELWRATMQSLVLVLVSTLFAL 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                    AA S+R   V+ P LD+MQ++P   +L   + +F            ++A F
Sbjct: 107 AIGIPIGIGAALSKRFWRVVAPALDMMQTMPSFVYLIPAIPFFGLG--------AVSACF 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +          +   P  L E + +F  S WQK + + +P ++P ++  +  ++
Sbjct: 159 ATIVFAMPPTIRLTALGILETPSQLVEAADAFGSSRWQKLFKVQLPLAIPTIMAGINQTI 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +  AI+  +      A + ++ +  + D++
Sbjct: 219 MLALSMVVIAAMIGAG-------GLGGEVWKAIQRLEAGQGFQAGIAIVVLAVILDRI 269



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 75/233 (32%), Gaps = 13/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   L I  F ++              +   F +   L +      ++  V+V  + A  
Sbjct: 50  LPPWLVIVLFGLLIWRLTTARIALFSMLGFAFLWN--LELWRATMQSLVLVLVSTLFALA 107

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI           + P   ++   P+ V+    +       ++      +     
Sbjct: 108 IGIPIGIGAALSKRFWRVVAPALDMMQTMPSFVYLIPAIPFFGLGAVSACFATIVF---- 163

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P+   E A +F  + W+    + LP   P  + G       A +
Sbjct: 164 AMPPTIRLTALGILETPSQLVEAADAFGSSRWQKLFKVQLPLAIPTIMAGINQTIMLALS 223

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +   G       GLG  + ++ ++    +     + +    + L+R 
Sbjct: 224 MVVIAAMIGAG-------GLGGEVWKAIQRLEAGQGFQAGIAIVVLAVILDRI 269


>gi|303327704|ref|ZP_07358144.1| taurine uptake ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302862065|gb|EFL84999.1| taurine uptake ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 281

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 10/180 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV++  I+AS++ +P+G+++     +   ++P   L    P   +  + +      
Sbjct: 86  ASFQRVIIGFILASVVAVPLGLFMALNKTVHGIVKPLFDLFKPMPPIAWVSIAILWFGIG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++I GT    L N   G      D  +V             ++  P  FP
Sbjct: 146 EFSK----VFIIIIGTFVPCLLNAYNGVRLVDPDLYDVIRVLGGKRRDEIFHVCFPASFP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   +   AW   + +E+ +         GLG  I    +  +   V+ G+L++  
Sbjct: 202 AVFAGLQISLSAAWTCVLAAELMNSRD------GLGFLIKRGMDTHNPSLVLSGMLLIAA 255



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 89/223 (39%), Gaps = 17/223 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            ++ +  +     +L  +   +  R++   +++ +         A ++ +  ++ P+ D+
Sbjct: 66  QMIRLTGMKFAGTNLWGHIWASFQRVIIGFILASVVAVPLGLFMALNKTVHGIVKPLFDL 125

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            + +P + +++  +++F           E + +F I          + Y  +  +  DL 
Sbjct: 126 FKPMPPIAWVSIAILWFGIG--------EFSKVFIIIIGTFVPCLLNAYNGVRLVDPDLY 177

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           +V R        + +++  P S P +   + +S+S  W  V+A+E++          G+G
Sbjct: 178 DVIRVLGGKRRDEIFHVCFPASFPAVFAGLQISLSAAWTCVLAAELM------NSRDGLG 231

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             I   +   +   +L  ML +    ++      LL R +  W
Sbjct: 232 FLIKRGMDTHNPSLVLSGMLLIAAAAWISSLGVSLLERKLCPW 274


>gi|28872384|ref|NP_795003.1| histidine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213971438|ref|ZP_03399551.1| histidine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382155|ref|ZP_07230573.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato Max13]
 gi|302060092|ref|ZP_07251633.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato K40]
 gi|302132378|ref|ZP_07258368.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855639|gb|AAO58698.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213923799|gb|EEB57381.1| histidine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|330874123|gb|EGH08272.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965521|gb|EGH65781.1| histidine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017887|gb|EGH97943.1| histidine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   
Sbjct: 87  GLWDKLMQTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPV 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ AIFA        +       +  +  ++ E   +F  + WQ+
Sbjct: 147 LMLFGLG--------KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQ 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  +       VV + MI          G+G  + + I+  ++ 
Sbjct: 199 LFGVQLPLAMPSIMAGINQTTMMALSMVVIASMI-------GARGLGEDVLVGIQTLNVG 251

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ +  + D++
Sbjct: 252 RGLEAGLAIVILAVVIDRI 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   I+       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLIIVGGIAWHATRKIITTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|302340180|ref|YP_003805386.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637365|gb|ADK82792.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 257

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++ RV +   +A+ I +P+ +   F P +S         L   P     PL
Sbjct: 56  GSLVMHILISLRRVFLGFFLAAGIALPLALLCYFFPLLSEYCSGLLHFLRNTPPLAMVPL 115

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +       L++    + I  N + G     +   E+  +  ++      +
Sbjct: 116 LILWFGIGEGSK----LALIVLACFFPIFLNTLNGLQQVDHRLLEMGETLELSRKEQTLH 171

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ P   P  +TG     G +W A I +E+ +       ++GLG  I ++       +V 
Sbjct: 172 ILFPEALPSMLTGLRLGFGYSWRALIGAEMIA------ASSGLGYLILDAELLARTDKVF 225

Query: 557 LGVLIMCCFVLALN 570
           +G+L +    L ++
Sbjct: 226 IGILSIGSLGLLMD 239



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 14/214 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I       L   SL  +   +  R+     ++       A L      L      
Sbjct: 40  PPPGQIGQAFISMLLDGSLVMHILISLRRVFLGFFLAAGIALPLALLCYFFPLLSEYCSG 99

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L  +++ P L  +   +++F      K+    LA  F IF         +    L  + 
Sbjct: 100 LLHFLRNTPPLAMVPLLILWFGIGEGSKLALIVLACFFPIF--------LNTLNGLQQVD 151

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E+  +  LS  ++  ++  P ++P ++  + +     W  ++ +EMI         
Sbjct: 152 HRLLEMGETLELSRKEQTLHILFPEALPSMLTGLRLGFGYSWRALIGAEMIAASS----- 206

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            G+G  I  A        +   +L++  +  L D
Sbjct: 207 -GLGYLILDAELLARTDKVFIGILSIGSLGLLMD 239


>gi|294500073|ref|YP_003563773.1| putative taurine ABC transporter permease [Bacillus megaterium QM
           B1551]
 gi|294350010|gb|ADE70339.1| putative taurine ABC transporter, permease protein [Bacillus
           megaterium QM B1551]
          Length = 262

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 81/189 (42%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +++R+   +++A +  IP+GI  G+  +I +   P  +     P   ++ L+V  +   
Sbjct: 71  ASLYRLFTALLLALLTAIPLGIICGYSKYILAIFDPIIEFYRPLPPLAYYALLVLWLGID 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+       +    +A     P D    A +   + +  + +IILP   P
Sbjct: 131 EGSK----VALLFLSAFAPLFIATVASVQRVPQDRINGALTLGASKFNVFIHIILPSALP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             VTG  T+ G  +   + +E+ +       T+G+G  + ++++      V +G++IM  
Sbjct: 187 DIVTGLRTSIGITYATLVAAEMVA------ATSGIGWMVLDASKYMRSDIVFVGIIIMGL 240

Query: 565 FVLALNRFL 573
             + ++  +
Sbjct: 241 IAILIDSII 249



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 87/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  + S +  R+ +A++++LL       +   S+ +  +  PI++  + +P L +    
Sbjct: 64  SLVTHLSASLYRLFTALLLALLTAIPLGIICGYSKYILAIFDPIIEFYRPLPPLAYYALL 123

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++       KV    L+A   +F + V         S+  +P+D    + +   S +  
Sbjct: 124 VLWLGIDEGSKVALLFLSAFAPLFIATV--------ASVQRVPQDRINGALTLGASKFNV 175

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F ++ +P ++P +V  +  S+   +  +VA+EM+          GIG  +  A K     
Sbjct: 176 FIHIILPSALPDIVTGLRTSIGITYATLVAAEMVA------ATSGIGWMVLDASKYMRSD 229

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            +   ++ M  +  L D ++
Sbjct: 230 IVFVGIIIMGLIAILIDSII 249


>gi|254387673|ref|ZP_05002911.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197701398|gb|EDY47210.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 222

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV+    + +   +PVG  +G+ P   + ++P+ Q     P     PL +  + 
Sbjct: 26  ALASVRRVLTGFALGTAAALPVGALMGWYPVARALLEPWVQFFRMVPPLAVIPLTIVLLG 85

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       ++          +V  G         + A          +  +++P  
Sbjct: 86  I----DETPKITVIFLAAFLSTAVSVFQGVLTVDRTLIDAARVLGAREPVIFARVVVPAT 141

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+  TGA    G +W+  + +E+ +         GLG  + ++        + +G+L +
Sbjct: 142 LPFLFTGARVGLGASWSTLVAAELIA------AQQGLGYRMQQAQLYYDLETIFVGILAI 195

Query: 563 CCFVLALNRFL 573
               L ++R L
Sbjct: 196 GSLGLLMDRLL 206



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 82/230 (35%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++      L   +L   A  +  R+L+   +          L         +L P
Sbjct: 4   PGPAPVLARGAELLADGTLTTDALASVRRVLTGFALGTAAALPVGALMGWYPVARALLEP 63

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +   + +P L  +  T+V        K        I  IF +   +   S++Q +  + 
Sbjct: 64  WVQFFRMVPPLAVIPLTIVLLGIDETPK--------ITVIFLAAFLSTAVSVFQGVLTVD 115

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R L + +R         F  + VP ++P L     + +   W  +VA+E+I         
Sbjct: 116 RTLIDAARVLGAREPVIFARVVVPATLPFLFTGARVGLGASWSTLVAAELIA------AQ 169

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            G+G  +  A    DL  I   +L +  +  L D+LL    R    W ++
Sbjct: 170 QGLGYRMQQAQLYYDLETIFVGILAIGSLGLLMDRLLIAAERRATAWQDR 219


>gi|301067141|ref|YP_003789164.1| putative glycine/betaine/carnitine ABC transporter
           membrane-spanning subunit [Lactobacillus casei str.
           Zhang]
 gi|300439548|gb|ADK19314.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus casei str.
           Zhang]
          Length = 283

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 101/237 (42%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F++++  +   L   Q+         +  + +      +  ++T   +L+A +++++
Sbjct: 54  IWLFIILVLALTWYLKRDQKYRSLLIFELLGLLLIWNLGFWRDMTQTLTLVLTASLLAIV 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+S+    V+ P++D MQ++P   +L   V +F     G V G   + IFA
Sbjct: 114 IGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +P DL E + +F  +GWQ+   + +PF+   ++  +  SM 
Sbjct: 171 MP-----PTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGTIMAGINQSMM 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A L ++ +  + D++
Sbjct: 226 LALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 275



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++A +I +P+GIW       S+ ++P    +   PA V+    V+      
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +          +     G +  P D  E A +F  TGW+    + LP     
Sbjct: 160 VPGVVASVIF----AMPPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGT 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A +  +++ +           GLG  +  +  +       +  L +   
Sbjct: 216 IMAGINQSMMLALSMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVIL 268

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 269 AIILDRI 275


>gi|255656336|ref|ZP_05401745.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
 gi|296450220|ref|ZP_06891981.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
 gi|296260983|gb|EFH07817.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
          Length = 209

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 8/197 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S  I   I  L+   LV       +       +P D++      +           T  R
Sbjct: 21  SMDILYKIILLVIIFLVWHFAAKDIGSSLLLPMPVDVIKGFFFCVTDAETVTNLFITLQR 80

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   + +LLF      +   S+    VL P++D ++ +PI+ ++  T+V+F        
Sbjct: 81  VLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFGIGDGP-- 138

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  IF I  S V+ +  +  Q +  I +D    +RS   S    F  + +P S+P 
Sbjct: 139 ------TIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPASLPD 192

Query: 192 LVWNMMMSMSGGWFFVV 208
           ++    +++S GW  V+
Sbjct: 193 ILTGSRIAISTGWMSVI 209



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 4/139 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ RV+   I A +  +P+G  +GF       + P    +   P   + PL +     
Sbjct: 75  FITLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFGI 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+ F   + I+ N I G  A   D+   A S   +    +  +I+P   
Sbjct: 135 GDG----PTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPASL 190

Query: 504 PYYVTGAITACGGAWNASI 522
           P  +TG+  A    W + I
Sbjct: 191 PDILTGSRIAISTGWMSVI 209


>gi|254446775|ref|ZP_05060250.1| ABC transporter, permease protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256200|gb|EDY80509.1| ABC transporter, permease protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 458

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     ++ +I IP+GI  G     S   +PF       PA  F  L+V+      
Sbjct: 242 SLRIVFFGFFLSCLIGIPIGILCGAYDFFSKLFEPFIDFFRYMPAPAFSTLLVAVF---- 297

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  +     L+  GT + ++  V            E A +         R +I+PGI P 
Sbjct: 298 LAHDAPKIALVFVGTFFQMVLVVSNTTRLLDESLLEAAQTLGAKNLSLLRRVIIPGILPN 357

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G +W   +++E+          +GL  +I       +F  V   ++++   
Sbjct: 358 LYNDMRILLGWSWTWLVIAELIG------VKSGLTEFIETQGRWRNFDAVFPIIILIGIT 411

Query: 566 VLALNRFL 573
               ++FL
Sbjct: 412 GFLTDQFL 419



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +     +S L       L         +  P +D  + +P   F T  V  F+ 
Sbjct: 240 FHSLRIVFFGFFLSCLIGIPIGILCGAYDFFSKLFEPFIDFFRYMPAPAFSTLLVAVFLA 299

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    +   I  +F    + M   +  +   +   L E +++           + +
Sbjct: 300 --------HDAPKIALVFVGTFFQMVLVVSNTTRLLDESLLEAAQTLGAKNLSLLRRVII 351

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P L  +M + +   W ++V +E+I V        G+  +I    + ++  A+   +
Sbjct: 352 PGILPNLYNDMRILLGWSWTWLVIAELIGVKS------GLTEFIETQGRWRNFDAVFPII 405

Query: 246 LTMLGVIFLYDQLL 259
           + +    FL DQ L
Sbjct: 406 ILIGITGFLTDQFL 419


>gi|187729719|ref|YP_001837308.1| binding-protein-dependent transport-like protein [Acidithiobacillus
           caldus]
 gi|167782104|gb|ACA00175.1| binding-protein-dependent transport-like protein [Acidithiobacillus
           caldus]
          Length = 230

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 14/210 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++ +  +      ++W    +M R+ V   I +I+ I VG+ +G+   + + I P+ ++
Sbjct: 24  AFLASLSSKAYWKDILW----SMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEI 79

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   PA  + P+ +        +    +  +   G  + I  N   G    P +  + A 
Sbjct: 80  LRPIPAIAWVPMAILM----WPSTEESIIFITFLGAVFPIALNTWDGVRRVPYELIKAAR 135

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S           +++P   P    G     GGAW A +  E+ S         G+G +  
Sbjct: 136 SLGAKKTSVLFNVVIPYAIPNITVGMALGMGGAWFALLAGEMISGR------FGIGYFTW 189

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           ES E   +  +++G++ +        + ++
Sbjct: 190 ESYELIQYGNIIVGMVTIGILSAVSTKLIY 219



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 94/225 (41%), Gaps = 17/225 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            ++     +L   +  +    + +R+  A  I  +           S  L  ++ P L+I
Sbjct: 20  HVLKAFLASLSSKAYWKDILWSMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEI 79

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP + ++   ++ +           E + IF  F   V+ +  + +  +  +P +L 
Sbjct: 80  LRPIPAIAWVPMAILMW--------PSTEESIIFITFLGAVFPIALNTWDGVRRVPYELI 131

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + +RS         + + +P+++P +   M + M G WF ++A EMI          GIG
Sbjct: 132 KAARSLGAKKTSVLFNVVIPYAIPNITVGMALGMGGAWFALLAGEMISG------RFGIG 185

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
            +   + +      I+  M+T+  +  +  +L++   + ++ W+ 
Sbjct: 186 YFTWESYELIQYGNIIVGMVTIGILSAVSTKLIYVMKQIVVPWAE 230


>gi|255590255|ref|XP_002535215.1| Glycine betaine/L-proline transport system permease protein proW,
           putative [Ricinus communis]
 gi|223523727|gb|EEF27169.1| Glycine betaine/L-proline transport system permease protein proW,
           putative [Ricinus communis]
          Length = 329

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ML A V+S+         A++S  +  VL+P+LDIMQ++P   +L   
Sbjct: 88  GLWDKLMQTLALMLVATVLSVALGVPLGIWASRSPWMRRVLLPVLDIMQTLPSFVYLIPV 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ AI A     +  +       + ++  D+ E +R+F  + WQ 
Sbjct: 148 LMLFGLG--------KVPAILATIIYALPPLIRLTDLGIRHVDADVVEAARAFGTTRWQL 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  +  +       VV + MI          G+G  +   I+  D+ 
Sbjct: 200 LVNVQLPLARPSIMAGINQTTMMALSMVVIASMIGS-------RGLGEDVLAGIQTLDIG 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A + ++ +  + D++
Sbjct: 253 KGMQAGIAIVILAIVIDRI 271



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 10/235 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
              ++     +F +   ++       L        E  L+      +   + +       
Sbjct: 10  IADWVNDHVQSFVAAYGDSFHDFSTALLRYVLVPLEGALRATPAWAILIAVGLLTLNATR 69

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            + I   +  + Y++  F   D L        T+  ++V  +++  + +P+GIW    P 
Sbjct: 70  RIGIAAFFVLLLYVIGCFGLWDKLMQ------TLALMLVATVLSVALGVPLGIWASRSPW 123

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+           +   L  I      ++     G  
Sbjct: 124 MRRVLLPVLDIMQTLPSFVYLIPVLMLFGLG----KVPAILATIIYALPPLIRLTDLGIR 179

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               D  E A +F  T W+    + LP   P  + G       A +  +++ +  
Sbjct: 180 HVDADVVEAARAFGTTRWQLLVNVQLPLARPSIMAGINQTTMMALSMVVIASMIG 234


>gi|116671581|ref|YP_832514.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611690|gb|ABK04414.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 298

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R V    IA +  + +G+ I +   +SS + P  +L          P+    +   
Sbjct: 102 ASLTRSVSGFSIAVVSAVVLGLLIAWYGWLSSFLNPLLELFRNTATLALLPVFTLLLGIG 161

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++ +   + +L N IAG           A S  +  +R ++ +ILP   P
Sbjct: 162 EESK----ITIVAYAAFFPVLLNTIAGVRTVDPLLIRAARSLGLNSFRLFQKVILPSAVP 217

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    I +E+           GLG  I  S      P++  G+L +  
Sbjct: 218 TIFTGIRMAGTSSILVLIAAEMVG------AKAGLGYLIVNSQMSFLIPDMYAGILTVSV 271

Query: 565 FVLALNRFL 573
             LA+N  L
Sbjct: 272 LGLAVNILL 280



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 79/204 (38%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L  +   +  R +S   I+++   V   L A    L   L P+L++ ++   L  
Sbjct: 91  LENGQLQSHLQASLTRSVSGFSIAVVSAVVLGLLIAWYGWLSSFLNPLLELFRNTATLAL 150

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L    +             E + I  +  +  + +  +    +  +   L   +RS  L+
Sbjct: 151 LPVFTLLLGIG--------EESKITIVAYAAFFPVLLNTIAGVRTVDPLLIRAARSLGLN 202

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++ F  + +P ++P +   + M+ +     ++A+EM+          G+G  I  +   
Sbjct: 203 SFRLFQKVILPSAVPTIFTGIRMAGTSSILVLIAAEMVGAKA------GLGYLIVNSQMS 256

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
             +  +   +LT+  +    + LL
Sbjct: 257 FLIPDMYAGILTVSVLGLAVNILL 280


>gi|28869002|ref|NP_791621.1| sulfonate ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28852242|gb|AAO55316.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|331017414|gb|EGH97470.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 285

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R ++ + I   I +   +  G        +    Q+L   P+    PL +      
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALVTGLSRRGEIALDSPMQMLRTIPSLALVPLFILWFGIG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ GT + +  N+ AG         E A++  ++      ++ILPG  P
Sbjct: 150 ----EFTKVALIVMGTTFPVYLNLFAGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  G   + G +W A +  E  +       T G+G   +++ +      +V+ +LI   
Sbjct: 206 SFFVGLRYSLGISWLALVFVEQIN------TTAGIGFLASDARDFMRTDVIVICLLIYSV 259

Query: 565 FVLALNRFLWHPLYLYG 581
             L ++  +   L  Y 
Sbjct: 260 LGLVIDGII-RTLERYA 275



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  + L  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAVHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIALDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFAGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPSFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGFLASDARDFMRTDVIVICLLIYSVLGLVIDGIIRTLERYALAWRPTF 282


>gi|294497625|ref|YP_003561325.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           QM B1551]
 gi|294347562|gb|ADE67891.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium QM B1551]
          Length = 281

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T   +L+++ IS++        A++S +   ++ PILD MQ++P   +L   + 
Sbjct: 88  WQETMDTLALVLTSVFISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALF 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +P DL E + ++  +  QK +
Sbjct: 148 FFG---IGVVPGVISSVIFAMP-----PTIRLTNLGIREVPADLVEAANAYGSTTKQKLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + ++         PG+G+ +  A+   ++   
Sbjct: 200 KVQLPLATKTIMAGINQSIMLSLSMVVIASLV-------GAPGLGAEVYRAVSRLEVGTG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
             A ++++ +  + D++
Sbjct: 253 FEAGISIVILAIILDRI 269



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 97/280 (34%), Gaps = 25/280 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           +F+ F+  +   FF  +S  V  +   + ++   FP   + +     +++     W   +
Sbjct: 15  HFVTFLNDNIKGFFDVISAIVDGIVSFIVLV-LTFPPALILILIVGIIAWFSSKKWSFTI 73

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             +   +   ++GY      +Q+ +        T+  V+  + I+ I+ IP+GIW     
Sbjct: 74  LSMIGLLFILNLGY------WQETMD-------TLALVLTSVFISIIVGIPLGIWASQSE 120

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  I P    +   PA V+    +       +   +   +          +     G 
Sbjct: 121 KTARIITPILDFMQTMPAFVYLIPALFFFGIGVVPGVISSVIF----AMPPTIRLTNLGI 176

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A+++  T  +    + LP      + G   +   + +  +++ +      
Sbjct: 177 REVPADLVEAANAYGSTTKQKLFKVQLPLATKTIMAGINQSIMLSLSMVVIASLVG---- 232

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLGA +  +  +          + +    + L+R 
Sbjct: 233 ---APGLGAEVYRAVSRLEVGTGFEAGISIVILAIILDRI 269


>gi|260778174|ref|ZP_05887067.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606187|gb|EEX32472.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
          Length = 300

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +   RT   +    ++S+          A+S R+   + P+LDIMQ++P   +L   
Sbjct: 99  GMWEDTMRTLSIITVCTMLSIALGIPIGIAMARSDRIQSAVTPMLDIMQTMPAFVYLIPV 158

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GK+ G     I+AI       +       +  + +++ E + +F  S  Q+
Sbjct: 159 VMLLG---IGKIPGLIAVVIYAIP-----PVIRLTNLGIRLVDKEVLEAATAFGASAKQR 210

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q   
Sbjct: 211 LWGVQLPLAMPTIMAGINQTIMMSLSMVVIASMIGV-------KGLGQPVLKSITNQYFT 263

Query: 240 AILYAMLTMLGVIFLYDQ 257
             L     ++ +  L+D+
Sbjct: 264 LGLLNGFAIVALAILFDR 281



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + +   C         +W+          +     +      T+  + V  +++  
Sbjct: 61  STPWVIVLAICTGLVFLASRSWKLTLGCFVSLIFIGYFGMWEDTMRTLSIITVCTMLSIA 120

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     I S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 121 LGIPIGIAMARSDRIQSAVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 176

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       + +
Sbjct: 177 AIPPVIRLTNLGIRLVDKEVLEAATAFGASAKQRLWGVQLPLAMPTIMAGINQTIMMSLS 236

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L    +    +  +R
Sbjct: 237 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 281


>gi|297201640|ref|ZP_06919037.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197710988|gb|EDY55022.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 289

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++   ++A+++ +  G+ I         + P  +++   PA    P+ +       
Sbjct: 64  SLTRILTGFLLAAVLGVATGVLIARSRLAEDLLGPVLEVVRPIPAIALVPVAILLFP--- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + +L +      A    ++E   +     WR    ++LPG  P 
Sbjct: 121 -SNEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVLTMGGGRWRILASVVLPGALPG 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +      +  V +G++ +   
Sbjct: 180 IFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVDYAGVFVGMVTIGVL 233

Query: 566 VLALN---RFLWHPLYLYGTR 583
               +     L   L  +  R
Sbjct: 234 GWVTSTAVELLGRRLTRWLPR 254



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 90/238 (37%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L     +     D+       L         + +  R+L+  +++ +       L A+SR
Sbjct: 31  LWLRFSQFPTVTDVASAFADRLSGPDYWTDLTDSLTRILTGFLLAAVLGVATGVLIARSR 90

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +L P+L++++ IP +  +   ++ F           E   +F  FT+  + +  S 
Sbjct: 91  LAEDLLGPVLEVVRPIPAIALVPVAILLF--------PSNEQGIVFITFTAAFFPVLVST 142

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +    EE   +     W+    + +P ++PG+   + + +   W  V+++EMI 
Sbjct: 143 RHAVRALTPVWEEAVLTMGGGRWRILASVVLPGALPGIFGGLSVGIGVSWICVISAEMIS 202

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
                    G+G          D   +   M+T+  + ++      LL R +  W  +
Sbjct: 203 G------QYGVGYRTWQDYTVVDYAGVFVGMVTIGVLGWVTSTAVELLGRRLTRWLPR 254


>gi|257055831|ref|YP_003133663.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256585703|gb|ACU96836.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 283

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 25/256 (9%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---SIGYIVNHFTYQDVLYVIWLGCI---- 385
           ++   +RV + L       +  + +   W+   ++G + + F       V+ LG +    
Sbjct: 27  RVSVARRVGWALSGVLVRSIAILVLLAGWEFAPAVGLVDSTFLPPFSEVVVELGELIGNG 86

Query: 386 --------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   ++ R +    IA  I +P+GI IG+   IS  + P  QL     A    P+ 
Sbjct: 87  QLLQHVQASLTRSLSGFGIAVAIAVPLGIVIGWYKVISDVLTPLVQLFLNTAALALLPVF 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +     +       ++++   W IL N I           ++  S ++     +  +
Sbjct: 147 VLLLGIGETSK----IAIVVYACTWPILLNTITAVRNVDPILLKLGRSLNLPPLTLFGKV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P   TG   A   A    I +E+           GLG  I ++    + P +  
Sbjct: 203 VLPASIPTIFTGLRLAGAAAIVVVIAAEMVG------AKAGLGFLINDAQYNFAVPSMYA 256

Query: 558 GVLIMCCFVLALNRFL 573
           G++ +    +  N+ L
Sbjct: 257 GIVTIAVVGVGFNQLL 272



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 82/212 (38%), Gaps = 17/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q+   +  R LS   I++        +    + +  VL P++ +  +   L  L  
Sbjct: 86  GQLLQHVQASLTRSLSGFGIAVAIAVPLGIVIGWYKVISDVLTPLVQLFLNTAALALLPV 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+             E + I  +  +  W +  +   ++ N+   L ++ RS  L    
Sbjct: 146 FVLLLGIG--------ETSKIAIVVYACTWPILLNTITAVRNVDPILLKLGRSLNLPPLT 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S+P +   + ++ +     V+A+EM+          G+G  I  A     +
Sbjct: 198 LFGKVVLPASIPTIFTGLRLAGAAAIVVVIAAEMVGAKA------GLGFLINDAQYNFAV 251

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
            ++   ++T+  V   ++QLL    R +  W 
Sbjct: 252 PSMYAGIVTIAVVGVGFNQLLVGVERRLTRWQ 283


>gi|169629328|ref|YP_001702977.1| putative nitrate ABC transporter, permease protein [Mycobacterium
           abscessus ATCC 19977]
 gi|169241295|emb|CAM62323.1| Putative nitrate ABC transporter, permease protein [Mycobacterium
           abscessus]
          Length = 292

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  R++    +A+++ +  GIW+G  P  ++   P  +L    PA    P+ +       
Sbjct: 96  STIRILTGFGLAAVLGVITGIWLGRSPLFANIFGPLTELARPIPAIAIVPVAILLFP--- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + I+ +      A P  ++E   +   + W     ++LPG  P 
Sbjct: 153 -SDEAGIVFITFLAAYFPIMVSTRHAVRALPTLWEESVRTLGGSRWDVLLRVVLPGSLPG 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G AW   + +E+ S         G+G    +S    ++P+V +G++ +   
Sbjct: 212 VFGGLSVGIGVAWICVVSAEMISGRL------GVGYRTWQSYTVLAYPDVFVGIITIGVL 265

Query: 566 VLA 568
              
Sbjct: 266 GFV 268



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 83/208 (39%), Gaps = 17/208 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             ++T+R+L+   ++ +   +      +S     +  P+ ++ + IP +  +   ++ F 
Sbjct: 93  LGQSTIRILTGFGLAAVLGVITGIWLGRSPLFANIFGPLTELARPIPAIAIVPVAILLF- 151

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +F  F +  + +  S   ++  +P   EE  R+   S W     + 
Sbjct: 152 -------PSDEAGIVFITFLAAYFPIMVSTRHAVRALPTLWEESVRTLGGSRWDVLLRVV 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+PG+   + + +   W  VV++EMI          G+G     +        +   
Sbjct: 205 LPGSLPGVFGGLSVGIGVAWICVVSAEMISG------RLGVGYRTWQSYTVLAYPDVFVG 258

Query: 245 MLTMLGVIFL---YDQLLFRPMIVWSNK 269
           ++T+  + F+     +L+ R +  W  +
Sbjct: 259 IITIGVLGFVTSAAIELVGRRVTRWLPR 286


>gi|237802267|ref|ZP_04590728.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025124|gb|EGI05180.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 283

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   
Sbjct: 87  GLWDKLMQTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPV 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ AIFA        +       +  +  ++ E   +F  + WQ+
Sbjct: 147 LMLFGLG--------KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQ 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  +       VV + MI          G+G  + + I+  ++ 
Sbjct: 199 LFGVQLPLAMPSIMAGINQTTMMALSMVVIASMI-------GARGLGEDVLVGIQTLNVG 251

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ +  + D++
Sbjct: 252 RGLEAGLAIVILAVVIDRI 270



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           L +   +  +L +  + ++  +  GIAW +   I+       +L+++    +      T+
Sbjct: 37  LWAIVNLEGLLRMAPWWLMLIIVGGIAWHATRKIITTLVIVGLLFLVGAVGLWDKLMQTL 96

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V  IIA +I IP+GI       + S + P   ++   P+ V+   V+         
Sbjct: 97  ALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +      +      ++     G      +  E  ++F    W+    + LP   P  +
Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIM 212

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A +  +++ +           GLG  +    +  +    +   L +    +
Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAV 265

Query: 568 ALNRF 572
            ++R 
Sbjct: 266 VIDRI 270


>gi|82542857|ref|YP_406804.1| taurine transporter subunit [Shigella boydii Sb227]
 gi|81244268|gb|ABB64976.1| taurine transport system permease protein [Shigella boydii Sb227]
 gi|332098453|gb|EGJ03419.1| taurine transport system permease protein tauC [Shigella boydii
           3594-74]
          Length = 269

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 19/266 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   
Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241

Query: 555 VVLGVLIMCCFVLALN---RFLWHPL 577
           V+ G+ ++      L    R L   L
Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRL 267



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 96/234 (41%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +  L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL 
Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLL 256


>gi|326798242|ref|YP_004316061.1| glycine/betaine ABC transporter permease [Sphingobacterium sp. 21]
 gi|326549006|gb|ADZ77391.1| ABC-type transporter, integral membrane subunit [Sphingobacterium
           sp. 21]
          Length = 278

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 99/240 (41%), Gaps = 16/240 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVI 78
           +  ++    + I        +       +  ++ + L  +    +   +T   +LS+ +I
Sbjct: 42  WIFVSIPFYVTIALFTFIAWRRAGKGIALFTLLGLGLIYLMGFWEETMQTLALILSSTLI 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+        +AK++    ++ P+LD+MQ++P   +L   V++F     GK+ GA    
Sbjct: 102 ALVIAVPLGIWSAKNQTAHKIIRPLLDLMQTMPAFVYLIPAVLFFS---IGKLPGAFATI 158

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+  +            +  +  D+ E +RS   +  Q    + +P ++  ++  +  
Sbjct: 159 IFAMPPA-----VRLTTLGIEQVQGDVLEAARSLGATQRQILLKVELPLALKTILTGINQ 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + MI  G       G+G  +   I   D+     + L ++ +  + D++
Sbjct: 214 TILLSLSMVVIAGMIAAG-------GLGEKVLEGINNLDIGLGFESGLAVVILAIILDRI 266



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 83/261 (31%), Gaps = 16/261 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
             T  +  F            + V ++     F V   +   IAW+  G  +  FT   +
Sbjct: 17  WLTENLRPFFDFIKNTGNAGIEGVEWIFVSIPFYVTIALFTFIAWRRAGKGIALFTLLGL 76

Query: 377 LYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +  +G       T+  ++   +IA +I +P+GIW          I+P   L+   PA 
Sbjct: 77  GLIYLMGFWEETMQTLALILSSTLIALVIAVPLGIWSAKNQTAHKIIRPLLDLMQTMPAF 136

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V+    V   S   L       +  +             G      D  E A S   T  
Sbjct: 137 VYLIPAVLFFSIGKLPGAFATIIFAMPPAVRL----TTLGIEQVQGDVLEAARSLGATQR 192

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP      +TG       + +  +++ + + G       GLG  + E      
Sbjct: 193 QILLKVELPLALKTILTGINQTILLSLSMVVIAGMIAAG-------GLGEKVLEGINNLD 245

Query: 552 FPEVVLGVLIMCCFVLALNRF 572
                   L +    + L+R 
Sbjct: 246 IGLGFESGLAVVILAIILDRI 266


>gi|269216258|ref|ZP_06160112.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
 gi|269130517|gb|EEZ61595.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
          Length = 250

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 85/250 (34%), Gaps = 26/250 (10%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-----------TMFRVVVLII 395
                +    I   W     +V      + L  +                +++RVV+ + 
Sbjct: 9   IAGYALAIAFIFAGWHITAMLVGSPALPEPLPAVRQLIAYGDEILPAFGTSLYRVVIAMF 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
             +++ IP+G+  G  P + +   P    L   P  V  P+++  +             L
Sbjct: 69  AGTVLAIPLGLVCGRSPRLDAVFAPVLYFLYPLPKVVLLPVLIVLMGLADA----PKIAL 124

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +     + +L  V   A A P D  E   S        +R++++P   P   T    + G
Sbjct: 125 IALTIFFQVLVTVRDAAKAVPEDSIESVRSLGAGRLDVYRHVVVPATLPELFTALRISSG 184

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            A      +E  +       +TGLG +I  S     +P +  G++ M    + L      
Sbjct: 185 TAVAILFFAESLAG------STGLGYFIVNSWALLDYPRMFAGIIAMAVLGVILYE---- 234

Query: 576 PLYLYGTRCL 585
            L+    R L
Sbjct: 235 -LFDVAERRL 243



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 86/247 (34%), Gaps = 19/247 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+     I  +L G      P   V  +    D   +      +  R++ AM    + 
Sbjct: 16  IAFIFAGWHITAMLVGSPALPEPLPAVRQLIAYGD--EILPAFGTSLYRVVIAMFAGTVL 73

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +  +S RL  V  P+L  +  +P +  L   +V            A+   I  I
Sbjct: 74  AIPLGLVCGRSPRLDAVFAPVLYFLYPLPKVVLLPVLIVLMGL--------ADAPKIALI 125

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  ++  +   +P D  E  RS        + ++ VP ++P L   + +S   
Sbjct: 126 ALTIFFQVLVTVRDAAKAVPEDSIESVRSLGAGRLDVYRHVVVPATLPELFTALRISSGT 185

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL--- 259
               +  +E +          G+G +I  +    D   +   ++ M  +  +  +L    
Sbjct: 186 AVAILFFAESLAGST------GLGYFIVNSWALLDYPRMFAGIIAMAVLGVILYELFDVA 239

Query: 260 FRPMIVW 266
            R +  W
Sbjct: 240 ERRLTRW 246


>gi|294495009|ref|YP_003541502.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Methanohalophilus mahii DSM 5219]
 gi|292666008|gb|ADE35857.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalophilus mahii DSM 5219]
          Length = 259

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +    T  +   +     I++    + II A +I +P+GI +G+  +      P  ++
Sbjct: 42  DVVYAFITIIERGVLFTDLTISLLHFGIGIISALVIGVPIGIAMGWFHNADRVADPLIEI 101

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   + P  +      H++       ++  G  + I+ N + G  +    + E   
Sbjct: 102 VRPIPPLAWIPFAIVWFGLTHIS----AGFVVFVGAVFPIIINTLTGFKSVSKVYVEAGK 157

Query: 485 SFH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +      RYI LP   P    G   A G  W   + +E+       +   GLG  I
Sbjct: 158 VLGCMKSTSLIRYIALPYSLPSIAAGIRIAMGVGWMCLVAAEMFG-----VSKNGLGYKI 212

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      V++ +LI+    L ++R  
Sbjct: 213 WWHYYLHQMDFVLVYMLILGFLGLLIDRVF 242



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 96/243 (39%), Gaps = 15/243 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           I  L+  +++  ++  L+ G         D+V      ++   L    + + L     ++
Sbjct: 13  IISLVTAIILWQLLADLVIGNTFILPSFTDVVYAFITIIERGVLFTDLTISLLHFGIGII 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            +L+                 V  P+++I++ IP L ++ F +V+F            ++
Sbjct: 73  SALVIGVPIGIAMGWFHNADRVADPLIEIVRPIPPLAWIPFAIVWFGL--------THIS 124

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR-LSGWQKFWYLGVPFSMPGLVWNM 196
           A F +F   V+ +  +      ++ +   E  +    +       Y+ +P+S+P +   +
Sbjct: 125 AGFVVFVGAVFPIIINTLTGFKSVSKVYVEAGKVLGCMKSTSLIRYIALPYSLPSIAAGI 184

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++M  GW  +VA+EM  V        G+G  I        +  +L  ML +  +  L D
Sbjct: 185 RIAMGVGWMCLVAAEMFGVSKN-----GLGYKIWWHYYLHQMDFVLVYMLILGFLGLLID 239

Query: 257 QLL 259
           ++ 
Sbjct: 240 RVF 242


>gi|154685348|ref|YP_001420509.1| SsuC [Bacillus amyloliquefaciens FZB42]
 gi|154351199|gb|ABS73278.1| SsuC [Bacillus amyloliquefaciens FZB42]
          Length = 277

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            A + V  +I  L +        P  I+      L    L  +   +  R  +  ++   
Sbjct: 38  AAVIAVWQVIASLGIVSTTVLPSPVVILQTFQELLLSGELWGHLEISLYRAAAGFLLGAG 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V+  L   S+R    L P L +++++P L      +++F      K++   L A F 
Sbjct: 98  LGLVFGLLVGFSKRTEAYLDPSLQMLRTVPHLAVTPLFILWFGFDETSKILLIALGAFFP 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  + ++   L +V+R    + +Q+   L +P S+P ++  + +S+ 
Sbjct: 158 VY--------INTFLGIRSVDAKLFDVARVLEFNWYQQMTKLILPASLPNILLGIRLSLG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++   +      G+G  I  A +      +   ++    V  L D   ++
Sbjct: 210 IAWLGLVVAELMGSSE------GVGYMIMDARQFSQTNKVFVGIIIFAAVGKLTDALVRM 263

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 264 LERKLLKWRNSYE 276



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                + + P  Q+L   P     PL +    +   +      LL+  G  + +  N   
Sbjct: 109 SKRTEAYLDPSLQMLRTVPHLAVTPLFILWFGFDETSK----ILLIALGAFFPVYINTFL 164

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  +      +VA       ++    +ILP   P  + G   + G AW   +V+E+    
Sbjct: 165 GIRSVDAKLFDVARVLEFNWYQQMTKLILPASLPNILLGIRLSLGIAWLGLVVAELMG-- 222

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + G+G  I ++ +     +V +G++I        +  +
Sbjct: 223 ----SSEGVGYMIMDARQFSQTNKVFVGIIIFAAVGKLTDALV 261


>gi|191639085|ref|YP_001988251.1| Putative glycine betaine membrane transport protein GbuB (GbuB
           protein) [Lactobacillus casei BL23]
 gi|190713387|emb|CAQ67393.1| Putative glycine betaine membrane transport protein GbuB (GbuB
           protein) [Lactobacillus casei BL23]
 gi|327383149|gb|AEA54625.1| hypothetical protein LC2W_2294 [Lactobacillus casei LC2W]
 gi|327386333|gb|AEA57807.1| hypothetical protein LCBD_2312 [Lactobacillus casei BD-II]
          Length = 283

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F++++  +   L   Q+         +  + +      +  ++T   +L+A +++++
Sbjct: 54  IWLFIILVLALTWYLKRDQKYRSLLIFELLGLLLIWNLGFWRDMTQTLTLVLTASLLAIV 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+S+ +  V+ P++D MQ++P   +L   V +F     G V G   + IFA
Sbjct: 114 IGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +P DL E + +F  +GWQ+   + +PF+   ++  +  SM 
Sbjct: 171 MP-----PTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGTIMAGINQSMM 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A L ++ +  + D++
Sbjct: 226 LALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 275



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++A +I +P+GIW      +S+ ++P    +   PA V+    V+      
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +          +     G +  P D  E A +F  TGW+    + LP     
Sbjct: 160 VPGVVASVIF----AMPPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGT 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A +  +++ +           GLG  +  +  +       +  L +   
Sbjct: 216 IMAGINQSMMLALSMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVIL 268

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 269 AIILDRI 275


>gi|295702996|ref|YP_003596071.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium
           DSM 319]
 gi|294800655|gb|ADF37721.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus
           megaterium DSM 319]
          Length = 281

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T   +L++++IS++        A++S +   ++ PILD MQ++P   +L   + 
Sbjct: 88  WQETMDTLALVLTSVLISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALF 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +P DL E + ++  +  QK +
Sbjct: 148 FFG---IGVVPGVISSVIFAMP-----PTIRLTNLGIREVPADLVEAANAYGSTTKQKLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + ++         PG+G+ +  A+   ++   
Sbjct: 200 KVQLPLATKTIMAGINQSIMLSLSMVVIASLV-------GAPGLGAEVYRAVSRLEVGTG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
             A ++++ +  + D++
Sbjct: 253 FEAGISIVILAIILDRI 269



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 98/280 (35%), Gaps = 25/280 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           +F+ F+  +   FF  +S  V  +   + ++   FP   + +     +++     W   +
Sbjct: 15  HFVTFLNDNIKGFFDVISAIVDGIVSFIVLV-LTFPPALILILIVGIIAWFSSKKWSFTI 73

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             +   +   ++GY      +Q+ +        T+  V+  ++I+ I+ IP+GIW     
Sbjct: 74  LSMIGLLFILNLGY------WQETMD-------TLALVLTSVLISIIVGIPLGIWASQSE 120

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +  I P    +   PA V+    +       +   +   +          +     G 
Sbjct: 121 KTARIITPILDFMQTMPAFVYLIPALFFFGIGVVPGVISSVIF----AMPPTIRLTNLGI 176

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D  E A+++  T  +    + LP      + G   +   + +  +++ +      
Sbjct: 177 REVPADLVEAANAYGSTTKQKLFKVQLPLATKTIMAGINQSIMLSLSMVVIASLVG---- 232

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLGA +  +  +          + +    + L+R 
Sbjct: 233 ---APGLGAEVYRAVSRLEVGTGFEAGISIVILAIILDRI 269


>gi|254975947|ref|ZP_05272419.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
 gi|255093334|ref|ZP_05322812.1| ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255101513|ref|ZP_05330490.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
 gi|255307387|ref|ZP_05351558.1| ABC transporter, permease protein [Clostridium difficile ATCC
           43255]
 gi|255315080|ref|ZP_05356663.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
 gi|255517750|ref|ZP_05385426.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
 gi|255650863|ref|ZP_05397765.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
 gi|306520756|ref|ZP_07407103.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58]
          Length = 209

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 8/197 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S  I   I  L+   LV       +       +P D++      +           T  R
Sbjct: 21  SMDILYKIILLVIIFLVWHFAAKDIGSSLLLPMPVDVIKGFFFCVTDAETVTNLFITLQR 80

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   + +LLF      +   S+    VL P++D ++ +PI+ ++  T+V+F        
Sbjct: 81  VLKGFMYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFGIGDGP-- 138

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  IF I  S V+ +  +  Q +  I +D    +RS   S    F  + VP S+P 
Sbjct: 139 ------TIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIVPASLPD 192

Query: 192 LVWNMMMSMSGGWFFVV 208
           ++    +++S GW  V+
Sbjct: 193 ILTGSRIAISTGWMSVI 209



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 4/139 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ RV+   + A +  +P+G  +GF       + P    +   P   + PL +     
Sbjct: 75  FITLQRVLKGFMYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFGI 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+ F   + I+ N I G  A   D+   A S   +    +  +I+P   
Sbjct: 135 GDG----PTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIVPASL 190

Query: 504 PYYVTGAITACGGAWNASI 522
           P  +TG+  A    W + I
Sbjct: 191 PDILTGSRIAISTGWMSVI 209


>gi|77404632|ref|YP_345206.1| glycine betaine/L-proline ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77390282|gb|ABA81465.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 313

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 97/237 (40%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L++ +      G     V   +V +  ++ D  SL   A  T   + +A+ + ++
Sbjct: 62  TVMLLLIVLVAWQAAGGRVALVVAAALVALGLLSPDAWSL---AMTTLAIVNAAVALCVI 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA KS R    + P LD MQ+IP   +L   V+       G V G  +  IFA
Sbjct: 119 IGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYLVPVVMLLG---IGNVSGVIVTIIFA 175

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +       + ++   + E +R+F  +  Q  + + +P + P ++  +  ++ 
Sbjct: 176 -----LPPLVRLTSLGIRSVNPGVVEAARAFGATPRQILFKVELPLATPTILAGLNQTIM 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI V        G+G+ +  A+   D    +   L ++ +  + D++
Sbjct: 231 LSLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRV 280



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 96/293 (32%), Gaps = 24/293 (8%)

Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338
            P  S  L +  +T+ ++    ++     P+ +    L   +  +    P   +      
Sbjct: 11  DPFRSIDLDIDGRTDGIKQWAIANRTALQPIKSFFDGLIGWIENLMQSIPPTVM------ 64

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
                  +    +V   A G     +                 L   T+  V   + +  
Sbjct: 65  -------LLLIVLVAWQAAGGRVALVVAAALVALGLLSPDAWSLAMTTLAIVNAAVALCV 117

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II +P+G+  G      + ++PF   +   PA V+   VV  +   +++  +   +    
Sbjct: 118 IIGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYLVPVVMLLGIGNVSGVIVTIIF--- 174

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G  +      E A +F  T  +    + LP   P  + G       + 
Sbjct: 175 -ALPPLVRLTSLGIRSVNPGVVEAARAFGATPRQILFKVELPLATPTILAGLNQTIMLSL 233

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +  +++ + S         GLG  +  +  +    + ++G L +    + L+R
Sbjct: 234 SMVVIASMIS-------VKGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDR 279


>gi|217978968|ref|YP_002363115.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217504344|gb|ACK51753.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 276

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 88/266 (33%), Gaps = 16/266 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +        R        ++ +      +L   W      +A   A  +        T 
Sbjct: 8   AEPISAPAAARGGSRFGAGRIIAPLLGVAVLAAAWTLAGAVLARNPATMAFAGFAPGPTL 67

Query: 374 QDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
             +  ++  G +      +  RV   +  A +I  PVG+ +G             QL+  
Sbjct: 68  TRLWTMLVDGSVWRAFTPSASRVGWGLGFAIVIGAPVGVLVGRSRFFREATYIPFQLVRM 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                + P+ +   + +       +  L+     W I+F V  G      D+ +VA +  
Sbjct: 128 ISPLAWMPIAILLFATWDG----AIVFLIAAAAVWPIVFAVAHGLKKLDPDWFKVAHNLG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              W     +I+P     +++G   A G AW   + +E          T+GLG  I ++ 
Sbjct: 184 ANPWHVLTAVIIPATAQDFLSGVRLAAGVAWIVLVPAEFLG------VTSGLGYAINDAR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   +  +   VL++       +  L
Sbjct: 238 DTLEYDRLGAIVLVIGVIGFVFDGLL 263



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 91/256 (35%), Gaps = 19/256 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPITLDVHSLPQY 64
           F + RI   +  +        +   +L     T       P   +  +   L   S+ + 
Sbjct: 23  FGAGRIIAPLLGVAVLAAAWTLAGAVLARNPATMAFAGFAPGPTLTRLWTMLVDGSVWRA 82

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+   +  +++       L  +SR           +++ I  L ++   ++ F 
Sbjct: 83  FTPSASRVGWGLGFAIVIGAPVGVLVGRSRFFREATYIPFQLVRMISPLAWMPIAILLFA 142

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       A +F I  + VW + F++   L  +  D  +V+ +   + W     + 
Sbjct: 143 TWDG--------AIVFLIAAAAVWPIVFAVAHGLKKLDPDWFKVAHNLGANPWHVLTAVI 194

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +    +  + ++    W  +V +E + V        G+G  I  A    +   +   
Sbjct: 195 IPATAQDFLSGVRLAAGVAWIVLVPAEFLGV------TSGLGYAINDARDTLEYDRLGAI 248

Query: 245 MLTMLGVIFLYDQLLF 260
           +L +  + F++D LL 
Sbjct: 249 VLVIGVIGFVFDGLLL 264


>gi|227533843|ref|ZP_03963892.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188544|gb|EEI68611.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 283

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F++++  +   L   Q+         +  + +      +  ++T   +L+A +++++
Sbjct: 54  IWLFIILVLALTWYLKRDQKYRSLLIFELLGLLLIWNLGFWRDMTQTLTLVLTASLLAIV 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+S+ +  V+ P++D MQ++P   +L   V +F     G V G   + IFA
Sbjct: 114 IGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +P DL E + +F  +GWQ+   + +PF+   ++  +  SM 
Sbjct: 171 MP-----PTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGTIMAGINQSMM 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A L ++ +  + D++
Sbjct: 226 LALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 275



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++A +I +P+GIW      +S+ ++P    +   PA V+    V+      
Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +          +     G +  P D  E A +F  TGW+    + LP     
Sbjct: 160 VPGVVASVIF----AMPPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGT 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A +  +++ +           GLG  +  +  +       +  L +   
Sbjct: 216 IMAGINQSMMLALSMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVIL 268

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 269 AIILDRI 275


>gi|161520581|ref|YP_001584008.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353231|ref|YP_001948858.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344631|gb|ABX17716.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337253|dbj|BAG46322.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 287

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 103/265 (38%), Gaps = 20/265 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  +RR     + +    L    + ++  G++   +P ++V       D         +
Sbjct: 21  PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   + LR+ +   I      V       SRR+  +L P    +++IP L ++   ++
Sbjct: 81  ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E   I  I     + +  ++   + N+ R L E+   +RL     F 
Sbjct: 141 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +  ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +
Sbjct: 193 RILLRAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 246

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
             A+L +  +  L D  + R  + W
Sbjct: 247 FGAILLLALLGKLTDGAMRRIELHW 271



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 10/246 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           + + +            P    ++         L +  F V  G        +   I + 
Sbjct: 12  DALVRRPCAPPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDT 71

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   V      +  RV     I + + + VG  +G    I + ++P  Q L A P+
Sbjct: 72  LARMGAARVARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPS 131

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+++  +             L+  G  + +   V+AG         E+ + + +  
Sbjct: 132 LAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRP 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R I+L    P  VTG  T    AW   + +E+ +       T GLG  +++  E G
Sbjct: 188 LALFRRILLRAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETG 241

Query: 551 SFPEVV 556
               V 
Sbjct: 242 RPDLVF 247


>gi|154490975|ref|ZP_02030916.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC
           43184]
 gi|154088723|gb|EDN87767.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC
           43184]
          Length = 271

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +LS+ +I+LLF         ++ +   V+ P+LD+MQ++P   +L   V++F 
Sbjct: 85  TMQTVALVLSSTIIALLFGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFFG 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V GA    IFA+       +       +  +P D+ E +RSF  +  Q  + + 
Sbjct: 145 L---GPVPGAFATVIFAMP-----PVVRLTDLGIRQVPEDIVEATRSFGATSGQLLFKVQ 196

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI  G       G+G  +   I +  +      
Sbjct: 197 LPLALPTIMAGVNQTIMMALSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEG 249

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 250 GIAVVILAIVLDRI 263



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 74/232 (31%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASII 400
           ++        +  +A   A +    +             W     T+  V+   IIA + 
Sbjct: 43  WVPFYLMIAGIAALAWWKAGKGTAVLTLLGLLLIWGMGFWVQTMQTVALVLSSTIIALLF 102

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GIW G     +  I+P   L+   PA V+    V       +       +      
Sbjct: 103 GVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF----A 158

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G    P D  E   SF  T  +    + LP   P  + G       A + 
Sbjct: 159 MPPVVRLTDLGIRQVPEDIVEATRSFGATSGQLLFKVQLPLALPTIMAGVNQTIMMALSM 218

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++ + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 219 VVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263


>gi|307545947|ref|YP_003898426.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307217971|emb|CBV43241.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 279

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   ++ A +++++        AA S RL   ++PILD MQ++P   +L   
Sbjct: 86  GLWDPMIETLTLVVIATLVAVVIALPVGIAAALSERLYRTIMPILDFMQTMPAFVYLIPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F            ++AIFA     +          +  +P +L E + ++  +  QK
Sbjct: 146 IPFFGIG--------SVSAIFATVIFSMPPAIRFTTLGIRQVPVELVEAADAYGATRSQK 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+P ++  +  ++      VV + MI          G+GS +  AI+     
Sbjct: 198 LIKVQLPMSLPTVMAGINQTIMLALSMVVIAAMI-------GADGLGSEVWRAIQRLRPG 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
               A + ++ +  + D++
Sbjct: 251 DGFEAGIAVVILAMILDRV 269



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 12/231 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASII 400
           ++ D     ++  +   +A   +               +W   I T+  VV+  ++A +I
Sbjct: 49  WLPDWSLLAIIVALCWWLANSRLAIGAAAGLALIWNLGLWDPMIETLTLVVIATLVAVVI 108

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +PVGI       +   I P    +   PA V+    +       ++      +     +
Sbjct: 109 ALPVGIAAALSERLYRTIMPILDFMQTMPAFVYLIPAIPFFGIGSVSAIFATVIF----S 164

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               +     G    P +  E A ++  T  +    + LP   P  + G       A + 
Sbjct: 165 MPPAIRFTTLGIRQVPVELVEAADAYGATRSQKLIKVQLPMSLPTVMAGINQTIMLALSM 224

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG+ +  + ++    +     + +    + L+R
Sbjct: 225 VVIAAMIG-------ADGLGSEVWRAIQRLRPGDGFEAGIAVVILAMILDR 268


>gi|296132982|ref|YP_003640229.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296031560|gb|ADG82328.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 252

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 17/258 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-------VIWLGCITMFR 389
           N R+   L      ++  +       S     + FT    LY        +     ++ R
Sbjct: 2   NARIRRFLFYLLLIIIWELVYKAGIWSPILFPSPFTVGKTLYNGFVDNSFVLAITCSLQR 61

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           +++   IA +I + VGI +G    I   +      L + P+ V+ PL +           
Sbjct: 62  LLISYAIAVVIGVAVGILMGKYKVIDETVGSLIVGLQSIPSVVWLPLALLWFGM----NE 117

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  +   G  W ++ N   G  + P      A +    G + + ++++P   P  +TG
Sbjct: 118 KAIIFITSLGGTWTMIVNTDTGVKSVPPIILRAARTMGAKGTKLFWHVVIPAAVPSIITG 177

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   AW A +  E+ S G      TGLG  +          ++V  ++I+      +
Sbjct: 178 MRLAWAFAWRALMAGELLSSG------TGLGQILMMGRNLSDMSQIVAVMIIIGMIGCLV 231

Query: 570 NRFLWHPLYLYGTRCLRL 587
           +  ++  + L   R   L
Sbjct: 232 DNLMFKKVELNIRRRWGL 249



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 100/240 (41%), Gaps = 15/240 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  +++  ++    +        P  +   +      +S     + +  R+L +  I+++
Sbjct: 12  LLLIIIWELVYKAGIWSPILFPSPFTVGKTLYNGFVDNSFVLAITCSLQRLLISYAIAVV 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L  K + +   +  ++  +QSIP + +L   +++F           E A IF 
Sbjct: 72  IGVAVGILMGKYKVIDETVGSLIVGLQSIPSVVWLPLALLWFGMN--------EKAIIFI 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 W M  +    + ++P  +   +R+    G + FW++ +P ++P ++  M ++ +
Sbjct: 124 TSLGGTWTMIVNTDTGVKSVPPIILRAARTMGAKGTKLFWHVVIPAAVPSIITGMRLAWA 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A E++  G       G+G  + +     D+  I+  M+ +  +  L D L+F+
Sbjct: 184 FAWRALMAGELLSSGT------GLGQILMMGRNLSDMSQIVAVMIIIGMIGCLVDNLMFK 237


>gi|313638506|gb|EFS03676.1| glycine betaine transport system permease protein opuAB [Listeria
           seeligeri FSL S4-171]
          Length = 282

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+G   +   G +   +  ++V ++ I        +  ++T   +L++ +I+L+
Sbjct: 52  LFIILLVLGXXXVNRKGKKWGLITFEVVGLLLIW--NLDFWRDMTQTLTLVLTSSLIALI 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  +  P+LD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 110 IGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +  +L E + SF  + WQK W + +P +   ++  +  S+ 
Sbjct: 167 MP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A + ++ V  + D+L
Sbjct: 222 LALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA II +
Sbjct: 53  FIILLVLGXXXVNRKGKKWGLITFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALIIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|299529399|ref|ZP_07042837.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni S44]
 gi|298722648|gb|EFI63567.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni S44]
          Length = 277

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 92/276 (33%), Gaps = 25/276 (9%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------- 372
           L       P   + L S++++         CV+   AI       G + + F        
Sbjct: 4   LAASPSRRPAKPVSLHSSRQLGLQWLERSACVLLFFAIWEFLPRAGLVNSAFLSPPSAVL 63

Query: 373 -----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +      ++ R +  +I+A +  + +G+ +G      + + P  QL   
Sbjct: 64  AAIVELAQTGQLGKHVAASLQRSLAGLILAILAGVALGLLMGVVRRFEAFVDPLLQLFRQ 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
             A   FP+ +        +       ++ +   W +L N I+G           A S  
Sbjct: 124 VSALALFPVFLLFFGIGEASK----IAIIFWAAFWPVLLNTISGVKQVEKLLIHSALSMG 179

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +    +  +ILP   P   TG   A   +  A + +E+           GLG     S 
Sbjct: 180 ASRGFIFFKVILPAAAPSIFTGIRLAGAYSITALVAAEMIGSH------AGLGFLTLNSQ 233

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLY 580
           E    P +  G++++    LALN     L   L  +
Sbjct: 234 EIFQIPSMYAGIVLLAVLGLALNYGLALLEKRLTRW 269



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 88/234 (37%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L      + P  ++  +        L ++ + +  R L+ +++++L       L    RR
Sbjct: 50  LVNSAFLSPPSAVLAAIVELAQTGQLGKHVAASLQRSLAGLILAILAGVALGLLMGVVRR 109

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               + P+L + + +  L      +++F           E + I  IF +  W +  +  
Sbjct: 110 FEAFVDPLLQLFRQVSALALFPVFLLFFGIG--------EASKIAIIFWAAFWPVLLNTI 161

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  + + L   + S   S    F+ + +P + P +   + ++ +     +VA+EMI  
Sbjct: 162 SGVKQVEKLLIHSALSMGASRGFIFFKVILPAAAPSIFTGIRLAGAYSITALVAAEMIG- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
                   G+G     + +   + ++   ++ +  +    +    LL + +  W
Sbjct: 221 -----SHAGLGFLTLNSQEIFQIPSMYAGIVLLAVLGLALNYGLALLEKRLTRW 269


>gi|182677669|ref|YP_001831815.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633552|gb|ACB94326.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 279

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++  V    +  S+  + +G   G    +     P    +   PA  + PL+V  +  
Sbjct: 84  FASLSIVGQAFLYGSLAALGLGFAAGLSRKVELFFGPTFDTIRHIPAIAWLPLIVLWLGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     L++     + +  N + G      ++ E+A    +T W++ R ++LP   
Sbjct: 144 GA----PAKILVIAKSVFFPVFLNTVQGIRQVERNYVELAKVLTLTRWQFVRQVVLPAAM 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     A G AW   +V+E  S         GLG  I  +       ++V+ ++I+ 
Sbjct: 200 PSILVSLRYAAGLAWALVVVAEGLSG------LEGLGFLIFRAQGLLLTDQLVVCMVIIG 253

Query: 564 CFVLALNR---FLWHPLYLYGT 582
               +++R    L   L  +  
Sbjct: 254 LVGFSIDRVMALLQRRLLRWKQ 275



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      L   +L      +   +  A +   L        A  SR++ +   
Sbjct: 60  LPPPLAVLKAFWQMLTTQNLALDFFASLSIVGQAFLYGSLAALGLGFAAGLSRKVELFFG 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D ++ IP + +L   V++     P K++    +  F +F         +  Q +  +
Sbjct: 120 PTFDTIRHIPAIAWLPLIVLWLGIGAPAKILVIAKSVFFPVF--------LNTVQGIRQV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R+  E+++   L+ WQ    + +P +MP ++ ++  +    W  VV +E +        
Sbjct: 172 ERNYVELAKVLTLTRWQFVRQVVLPAAMPSILVSLRYAAGLAWALVVVAEGLSG------ 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271
           L G+G  I  A        ++  M+ +  V F  D+   LL R ++ W   F 
Sbjct: 226 LEGLGFLIFRAQGLLLTDQLVVCMVIIGLVGFSIDRVMALLQRRLLRWKQGFE 278


>gi|154247392|ref|YP_001418350.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161477|gb|ABS68693.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 294

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 84/276 (30%), Gaps = 22/276 (7%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +        R             +          +L + W   +  V +       GY
Sbjct: 7   TAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEILAQTGY 66

Query: 367 IVNHFTYQDV------------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +                       ++     ++ R  V  ++   I   +GI +GF    
Sbjct: 67  VTPQVLPAPSKVVRTAWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILVGFSRLA 126

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + I    Q++ A P     PLV+                L+  G  + I  N   G   
Sbjct: 127 EALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQK----IFLVALGVAFPIYINTTLGIRQ 182

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E+     ++  +    IILPG  P  +TG   A   AW A +V+E         
Sbjct: 183 VDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIG------ 236

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              G+G    ++ E      VVL ++I     +A +
Sbjct: 237 AQAGIGFLAMDAREFLRTDVVVLTIVIYALIGVAAD 272



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 15/235 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  VLV  I+    +   +    P  +V          SL      + LR     V+   
Sbjct: 52  LLLVLVWEILAQTGYVTPQVLPAPSKVVRTAWRLATTGSLLTDLGTSLLRAAVGFVLGGS 111

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    L   SR    ++   + ++++IP L  L   +V+F      K        IF 
Sbjct: 112 IAFGLGILVGFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQK--------IFL 163

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    +  +   L E+ R   LS  Q    + +P ++P ++  +  +++
Sbjct: 164 VALGVAFPIYINTTLGIRQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALA 223

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W  +V +E I          GIG     A +      ++  ++    +    D
Sbjct: 224 TAWLALVVAETIG------AQAGIGFLAMDAREFLRTDVVVLTIVIYALIGVAAD 272


>gi|254821792|ref|ZP_05226793.1| ABC transporter permease protein [Mycobacterium intracellulare ATCC
           13950]
          Length = 281

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 23/251 (9%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI---------- 380
             +  + +  S +L +       GV   +    +  ++   T   V  ++          
Sbjct: 17  RPRRIAARWQSRLLRLASVAAAIGVWQLLTADKVRLLLRFDTLPTVTEIVNALHRRLGTG 76

Query: 381 --WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             WL    ++ R++    +A+++ +  G+ +G     +    P  +L    PA    P+ 
Sbjct: 77  EYWLDLAQSLIRILTGFGLAAVVGVATGVLLGRSRLFADVFGPLVELARPIPAIAMVPVA 136

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +  +      + I+ +      A P  +++   +     W+    +
Sbjct: 137 ILLFP----TDEAGIVFITFLAAYFPIMVSTRHAVRALPTLWEDSVRTLGGGRWQVLTQV 192

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPGI P    G     G AW   I +E+ S         G+G    +     ++P V +
Sbjct: 193 VLPGILPGVFGGLSVGMGVAWICVISAEMISGRL------GVGYRTWQDYTVLAYPRVFV 246

Query: 558 GVLIMCCFVLA 568
           G++ +      
Sbjct: 247 GIITIGVLGFV 257



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 91/238 (38%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           LL          +IV+ +   L         +++ +R+L+   ++ +       L  +SR
Sbjct: 52  LLLRFDTLPTVTEIVNALHRRLGTGEYWLDLAQSLIRILTGFGLAAVVGVATGVLLGRSR 111

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V  P++++ + IP +  +   ++ F           E   +F  F +  + +  S 
Sbjct: 112 LFADVFGPLVELARPIPAIAMVPVAILLF--------PTDEAGIVFITFLAAYFPIMVST 163

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +P   E+  R+     WQ    + +P  +PG+   + + M   W  V+++EMI 
Sbjct: 164 RHAVRALPTLWEDSVRTLGGGRWQVLTQVVLPGILPGVFGGLSVGMGVAWICVISAEMIS 223

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
                    G+G              +   ++T+  + F+     +L+ R +  W  +
Sbjct: 224 G------RLGVGYRTWQDYTVLAYPRVFVGIITIGVLGFVTSAAVELVGRRVTRWLPR 275


>gi|282898027|ref|ZP_06306022.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9]
 gi|281197171|gb|EFA72072.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9]
          Length = 241

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 16/186 (8%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDVHSL 61
           F+  ++ P +  L+ F+++  ++  +        L    ET  P  I            L
Sbjct: 24  FLVHKVLPPLCGLVIFLMLWQLLCSIPGFQLPGPLETFVETWDPFIIKPFFDNGDSDKGL 83

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R+     ++ +       L   +R L   + PI  ++++IP L +L  ++ 
Sbjct: 84  GWQILTSLGRVGLGFSLATIVGIFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISLA 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F    P        +AIF IF + +W +  +    + NIP+D   V+R  RL   + F 
Sbjct: 144 AFQQANP--------SAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQGKYFL 195

Query: 182 YLGVPF 187
            +  P 
Sbjct: 196 KISFPS 201



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + W    ++ RV +   +A+I+ I +GI IG    + + + P  Q+L   P   + P+ +
Sbjct: 83  LGWQILTSLGRVGLGFSLATIVGIFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISL 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +         N     ++   + W IL N   G    P D+  VA    +   +++  I 
Sbjct: 143 AAFQ----QANPSAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQGKYFLKIS 198

Query: 499 LPG 501
            P 
Sbjct: 199 FPS 201


>gi|15893404|ref|NP_346753.1| sulfate ABC transporter permease [Clostridium acetobutylicum ATCC
           824]
 gi|15022933|gb|AAK78093.1|AE007523_8 ABC-type probable sulfate transporter, permease protein
           [Clostridium acetobutylicum ATCC 824]
 gi|325507516|gb|ADZ19152.1| ABC-type probable sulfate transporter, permease protein
           [Clostridium acetobutylicum EA 2018]
          Length = 265

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 16/238 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV------IWLGCITMFRVVVLIII 396
           ++ I+       V I   W++  +      Y  + Y+            ++ R+V+  II
Sbjct: 21  LIAIWELIYKVFVDILGVWKAYTFPSPGEVYNALAYLVKDNTLFIATGASLTRLVIGYII 80

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I I + +      ++   + P    L   P+  + P  +             +  + 
Sbjct: 81  ALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGI----DERSIIFVT 136

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G+ + I  + I+G       + + A +    G   +  +++P   P  ++G       
Sbjct: 137 VVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEIISGMRQGWSF 196

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           AW A +  E+ S       T GLG  +    E G   +V+  ++I+  F L  ++ L+
Sbjct: 197 AWRALMAGEMLS------ATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIFDKLLF 248



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 105/246 (42%), Gaps = 17/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I   I++L+  V V  +     +       P ++ + +   +  ++L      +  R++ 
Sbjct: 20  ILIAIWELIYKVFVDILGVWKAYTF---PSPGEVYNALAYLVKDNTLFIATGASLTRLVI 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I+L      A +  K + +   L P++  +Q++P + ++ F ++++           
Sbjct: 77  GYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGID-------- 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + IF      ++++  S    + N+     + +R+    G   ++ + +P ++P ++ 
Sbjct: 129 ERSIIFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEIIS 188

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M    S  W  ++A EM+          G+G  +    +  D+  ++  M+ ++    +
Sbjct: 189 GMRQGWSFAWRALMAGEMLS------ATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLI 242

Query: 255 YDQLLF 260
           +D+LLF
Sbjct: 243 FDKLLF 248


>gi|163857621|ref|YP_001631919.1| putative binding-protein-dependent transport protein [Bordetella
           petrii DSM 12804]
 gi|163261349|emb|CAP43651.1| putative binding-protein-dependent transport protein [Bordetella
           petrii]
          Length = 285

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +V+     +  G+         +  +   + +  L     +T   M+ A  +S++     
Sbjct: 55  IVVAATIAIAWGVSRRIGLSVAMGALLCVIGLLGLWDAGMQTLALMIMAAGLSVIIGIPV 114

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A++  L  +++P+LD+MQ++P   +L   V+ F           ++ AI A     
Sbjct: 115 GVLMARANWLRSIMLPLLDVMQTMPSFVYLIPVVMLFGLG--------KIPAIIATVIYA 166

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +       +  + R++ E SR+F  S  Q+ + + +P ++P ++  +  +       
Sbjct: 167 VPPLIRLTDLGIRLVDREVLEASRAFGASPRQQLFGVQLPLALPNIMAGINQTTMMALSM 226

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + L I   ++   L A L ++ +  L+D++
Sbjct: 227 VVIASMI-------GARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 17/237 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVLII 395
           ++L    + +V    I IAW     I        +L VI L      G  T+  +++   
Sbjct: 46  HLLRSTPWWIVVAATIAIAWGVSRRIGLSVAMGALLCVIGLLGLWDAGMQTLALMIMAAG 105

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           ++ II IPVG+ +     + S + P   ++   P+ V+   VV           +   + 
Sbjct: 106 LSVIIGIPVGVLMARANWLRSIMLPLLDVMQTMPSFVYLIPVVMLFGLG----KIPAIIA 161

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +      ++     G      +  E + +F  +  +    + LP   P  + G      
Sbjct: 162 TVIYAVPPLIRLTDLGIRLVDREVLEASRAFGASPRQQLFGVQLPLALPNIMAGINQTTM 221

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ +           GLG  +     +      +L  L +    +  +R 
Sbjct: 222 MALSMVVIASMIG-------ARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271


>gi|111222756|ref|YP_713550.1| alkanesulfonate ABC transporter membrane protein [Frankia alni
           ACN14a]
 gi|111150288|emb|CAJ61985.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           (partial match) [Frankia alni ACN14a]
          Length = 303

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 17/281 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSI 364
           SP +   +++  + G            L     V  +L   W            +     
Sbjct: 32  SPAAARGRRVTFSAGGTDRRRRLWVPSLVRRAIVPILLVALWQVGSSSSWWSTEVLPAPW 91

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                  T  +   +     +++ R +    I   + + +G+ +G    +   +    Q+
Sbjct: 92  NVAHEFVTLWNNGQLPSNLWVSVRRALTGAAIGIAVGLSLGVAVGLWRPVEEALDATLQM 151

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P  V  PL +               L++  GT   +  N ++G         E+  
Sbjct: 152 LRTIPFLVILPLFILWFGV----DETPKILIITIGTALPMYINTMSGVRTVDPRLLEMGR 207

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            F +   R    ++LPG  P  +TG   + G +W A +V+E  +         GLG  I 
Sbjct: 208 QFGLNRLRLIATVVLPGAMPSILTGVRYSLGLSWLALVVAEQIN------AQKGLGLLIY 261

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            +        +++ V++     L  +  +         R L
Sbjct: 262 NAQSLFQTKILMVVVVVYAALGLITDVVV-----RLAERRL 297



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 90/266 (33%), Gaps = 23/266 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYAS 66
           P  + R I P     +  V +  + +       E    P ++        +   LP    
Sbjct: 57  PSLVRRAIVP-----ILLVALWQVGSSSSWWSTEVLPAPWNVAHEFVTLWNNGQLPSNLW 111

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R L+   I +             R +   L   L ++++IP L  L   +++F   
Sbjct: 112 VSVRRALTGAAIGIAVGLSLGVAVGLWRPVEEALDATLQMLRTIPFLVILPLFILWFGVD 171

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I       M  +    +  +   L E+ R F L+  +    + +P
Sbjct: 172 ETPK--------ILIITIGTALPMYINTMSGVRTVDPRLLEMGRQFGLNRLRLIATVVLP 223

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP ++  +  S+   W  +V +E I          G+G  I  A        ++  ++
Sbjct: 224 GAMPSILTGVRYSLGLSWLALVVAEQI------NAQKGLGLLIYNAQSLFQTKILMVVVV 277

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNK 269
               +  + D   +L  R ++ W  +
Sbjct: 278 VYAALGLITDVVVRLAERRLLAWRGR 303


>gi|325288976|ref|YP_004265157.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964377|gb|ADY55156.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 263

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 16/224 (7%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
              GY+ N  T   +   I    I+ +R+ +  I+A++I IP+GI  G      + IQP 
Sbjct: 50  SVFGYLANVMTTGQIWSDIG---ISFYRIFMGFILAAVIGIPLGILAGTFNFAEALIQPV 106

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           ++ +   P   F PL++  V             ++  GT + ++  V     A P+D   
Sbjct: 107 SEFIRYMPVPAFVPLIMVWVGI----NESAKIAVIFLGTLFQLIPMVADSVRAVPDDLLS 162

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +           +I+P I P  +       G AW   +V+E+ +        +GLG 
Sbjct: 163 AAYTLGAKPRTVILKVIIPAIAPRTMDTLRIMMGWAWTYLVVAELVA------ANSGLGY 216

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582
            I ++        +  G+LI+    L  +R        L+ +  
Sbjct: 217 SILKAQRFLKTDAIFGGILIIGFLGLMTDRLFVLANRKLFPWAE 260



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 89/250 (35%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  +L + +             PR +   +   +    +      +  R+    +++ +
Sbjct: 25  LLILILWMVLSEQGSISPIFLPTPRSVFGYLANVMTTGQIWSDIGISFYRIFMGFILAAV 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA        ++ P+ + ++ +P+  F+   +V+            E A I  
Sbjct: 85  IGIPLGILAGTFNFAEALIQPVSEFIRYMPVPAFVPLIMVWVGIN--------ESAKIAV 136

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   ++ +   +  S+  +P DL   + +           + +P   P  +  + + M 
Sbjct: 137 IFLGTLFQLIPMVADSVRAVPDDLLSAAYTLGAKPRTVILKVIIPAIAPRTMDTLRIMMG 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
             W ++V +E++          G+G  I  A +     AI   +L +  +  + D+L   
Sbjct: 197 WAWTYLVVAELVAANS------GLGYSILKAQRFLKTDAIFGGILIIGFLGLMTDRLFVL 250

Query: 261 --RPMIVWSN 268
             R +  W+ 
Sbjct: 251 ANRKLFPWAE 260


>gi|323705112|ref|ZP_08116688.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535538|gb|EGB25313.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 277

 Score =  115 bits (288), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++FR++   I+ ++  + +G+ +G  P I + + P        P     PL++      
Sbjct: 86  VSLFRIIGGFIVGAVPGLIIGLTMGLFPIIRNILDPIVAATYPIPKLALMPLIMIMFGL- 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +L   +++  GT + +L N  AG       + +VA ++  +   ++  + LPG  P
Sbjct: 145 ---NDLEKIVVIAIGTFFIVLMNTAAGVINLDKIYMDVARNYGASKKDYYLTVALPGALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG     G A    + +E+      +  ++G+G  I ES      P + +  +IM  
Sbjct: 202 MIFTGLKLGMGMALLLIVAAEM------NGASSGIGYRIWESYNIFDIPAMFVSFIIMSI 255

Query: 565 FVLALNRFL 573
                   L
Sbjct: 256 LGYVFTIIL 264



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           S +    I   +A +++  I+  + L   +    P  I       L    L    S +  
Sbjct: 30  SNKFIQQIISPIAILILWEILADLRLIDTRFFPAPSMIFHSFINLLTTGILLNDLSVSLF 89

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++   ++  +   +          +  +L PI+     IP L  +   ++ F       
Sbjct: 90  RIIGGFIVGAVPGLIIGLTMGLFPIIRNILDPIVAATYPIPKLALMPLIMIMFGLN---- 145

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +L  I  I     + +  +    + N+ +   +V+R++  S    +  + +P ++P
Sbjct: 146 ----DLEKIVVIAIGTFFIVLMNTAAGVINLDKIYMDVARNYGASKKDYYLTVALPGALP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + + M      +VA+EM           GIG  I  +    D+ A+  + + M  
Sbjct: 202 MIFTGLKLGMGMALLLIVAAEM------NGASSGIGYRIWESYNIFDIPAMFVSFIIMSI 255

Query: 251 VIFLYDQLL 259
           + +++  +L
Sbjct: 256 LGYVFTIIL 264


>gi|306845959|ref|ZP_07478526.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306273594|gb|EFM55439.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 301

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDTVASIVRPILDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDTVASIVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|212696313|ref|ZP_03304441.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676942|gb|EEB36549.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 281

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 18/246 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLRM 72
           +F  IF +   +L I ++  L + + +      I  I+ + L + +L  +     T   +
Sbjct: 42  LFIKIFSVFPPLLFIILVAALAYYLTKKIKGITIFSILSLLL-IWNLDYWDDMVITLSIV 100

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +++ +++++         +KS  +  V++P+LD MQ++P   +L   V +F     G   
Sbjct: 101 VTSALLAIIIGIPLGIWTSKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFG---IGMAP 157

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   + IFA+  +            +  +P DL E + SF  +  QK + L +P + P +
Sbjct: 158 GVISSIIFAMPPA-----VRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSI 212

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++      VV + MI         PG+G+ I  ++   D+     + + ++ + 
Sbjct: 213 MAGINQTLMLTLSMVVVASMI-------GAPGLGNVIYTSVSRNDVGVGFASGIAIVILA 265

Query: 253 FLYDQL 258
            + D+L
Sbjct: 266 VILDRL 271



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 74/230 (32%), Gaps = 14/230 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIG---YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +  +V  +A  +  +  G   + +        L       IT+  VV   ++A II I
Sbjct: 53  LLFIILVAALAYYLTKKIKGITIFSILSLLLIWNLDYWDDMVITLSIVVTSALLAIIIGI 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW      +   I P    +   PA V+    VS          +   +        
Sbjct: 113 PLGIWTSKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPGVISSIIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G    P+D  E A SF  T  +    + LP   P  + G         +  +
Sbjct: 169 PAVRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V+ +           GLG  I  S  +          + +    + L+R 
Sbjct: 229 VASMIG-------APGLGNVIYTSVSRNDVGVGFASGIAIVILAVILDRL 271


>gi|293606871|ref|ZP_06689219.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814723|gb|EFF73856.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 285

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 98/231 (42%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ +   + +G+         +  +   + V  L     +T   M+ A  +S++      
Sbjct: 56  VVAVTIAIAYGVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVVIGIPLG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A+   L  +++P+LD+MQ++P   +L   V+ F           ++ AI A     V
Sbjct: 116 VLMARINWLRSIMLPVLDVMQTMPSFVYLIPVVMLFGLG--------KIPAIIATVIYAV 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +       +  + R++ E SR+F  +  Q+ + + +P ++P ++  +  +       V
Sbjct: 168 PPLIRLTDLGIRLVDREVLEASRAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G  + L I   ++   L A L ++ +  L+D++
Sbjct: 228 VIASMI-------GARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 78/254 (30%), Gaps = 11/254 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           TL  +        + L    R S    +    +     +         +        VL 
Sbjct: 29  TLETLSQPVLHALVWLEQLLRNSPWWAVVAVTIAIAYGVSRRIGLSLAMGALLCVIGVLG 88

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   G  T+  +++   ++ +I IP+G+ +     + S + P   ++   P+ V+   VV
Sbjct: 89  LWDAGMQTLALMIMAAGLSVVIGIPLGVLMARINWLRSIMLPVLDVMQTMPSFVYLIPVV 148

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +   +  +      ++     G      +  E + +F     +    + 
Sbjct: 149 MLFGLG----KIPAIIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGANPRQQLFGVQ 204

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G       A +  +++ +           GLG  +     +      +L 
Sbjct: 205 LPLALPNIMAGINQTTMMALSMVVIASMIG-------ARGLGYEVLLGINRLEVGRGLLA 257

Query: 559 VLIMCCFVLALNRF 572
            L +    +  +R 
Sbjct: 258 GLGIVVLAVLFDRI 271


>gi|221069967|ref|ZP_03546072.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220714990|gb|EED70358.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 277

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 92/276 (33%), Gaps = 25/276 (9%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------- 372
           L       P   + L S++++         CV+   AI       G + + F        
Sbjct: 4   LAASPSRRPAKPVSLLSSRQLGLQWLERSACVLLFFAIWELLPRAGLVNSAFLSPPSAVL 63

Query: 373 -----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +      ++ R +  +I+A +  + +G+ +G      + + P  QL   
Sbjct: 64  AAIVQLAQTGQLGKHMAASLQRSLAGLILAVVAGVALGLLMGVVRRFEAFVDPLLQLFRQ 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
             A   FP+ +        +       ++ +   W +L N I+G           A S  
Sbjct: 124 VSALALFPVFLLFFGIGEASK----IAIIFWAAFWPVLLNTISGVKQVEKLLIHSALSMG 179

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +    +  +ILP   P   TG   A   +  A + +E+           GLG     S 
Sbjct: 180 ASRGFIFFKVILPAAAPSIFTGIRLAGAYSITALVAAEMIGSH------AGLGFLTLNSQ 233

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLY 580
           E    P +  G++++    LALN     L   L  +
Sbjct: 234 EIFQIPSMYAGIVLLAVLGLALNYGLALLEKRLTRW 269



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 94/249 (37%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L F  +  ++    L      + P  ++  +        L ++ + +  R L+ +++++
Sbjct: 35  VLLFFAIWELLPRAGLVNSAFLSPPSAVLAAIVQLAQTGQLGKHMAASLQRSLAGLILAV 94

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L    RR    + P+L + + +  L      +++F           E + I 
Sbjct: 95  VAGVALGLLMGVVRRFEAFVDPLLQLFRQVSALALFPVFLLFFGIG--------EASKIA 146

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF +  W +  +    +  + + L   + S   S    F+ + +P + P +   + ++ 
Sbjct: 147 IIFWAAFWPVLLNTISGVKQVEKLLIHSALSMGASRGFIFFKVILPAAAPSIFTGIRLAG 206

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
           +     +VA+EMI          G+G     + +   + ++   ++ +  +    +    
Sbjct: 207 AYSITALVAAEMIG------SHAGLGFLTLNSQEIFQIPSMYAGIVLLAVLGLALNYGLA 260

Query: 258 LLFRPMIVW 266
           LL + +  W
Sbjct: 261 LLEKRLTRW 269


>gi|253582359|ref|ZP_04859582.1| ABC transporter permease [Fusobacterium varium ATCC 27725]
 gi|251835898|gb|EES64436.1| ABC transporter permease [Fusobacterium varium ATCC 27725]
          Length = 287

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 101/240 (42%), Gaps = 15/240 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I + + + +++  + +    +        +   +   + +  L    + T   +L+A+ I
Sbjct: 50  ILNFIPWWVLVLFVFLAGWKLTGKLRNGILYSCMLFFIGIIGLWDLMNDTLSIVLAAVFI 109

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SLL  F    L + + ++   + PILD MQ++P+  +L   V++F       VI   + A
Sbjct: 110 SLLLGFPIGILISGNDKINGFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATTIYA 169

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +               +  + +++ E +R+F  + +Q  W + +P ++P ++  +  
Sbjct: 170 IVPVIRL--------TSHGIRQVDKEVVEAARAFGSTKFQTLWKVQIPQALPTIMTGVNQ 221

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV   MI          G+G  + + +   ++   L A   ++ V  L D++
Sbjct: 222 TLMMAMAMVVTCSMI-------GASGLGMEVLIGVNRIEIGRGLVAGTAVVIVAILMDRI 274



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 17/239 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVL 393
           +  +L+   + V+        W+  G + N   Y  +L+ I +  +      T+  V+  
Sbjct: 47  ILTILNFIPWWVLVLFVFLAGWKLTGKLRNGILYSCMLFFIGIIGLWDLMNDTLSIVLAA 106

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++  P+GI I     I+  ++P    +   P  V+    V           +  +
Sbjct: 107 VFISLLLGFPIGILISGNDKINGFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATT 166

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  I      ++     G      +  E A +F  T ++    + +P   P  +TG    
Sbjct: 167 IYAIV----PVIRLTSHGIRQVDKEVVEAARAFGSTKFQTLWKVQIPQALPTIMTGVNQT 222

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              A    +   +          +GLG  +     +      ++    +    + ++R 
Sbjct: 223 LMMAMAMVVTCSMIG-------ASGLGMEVLIGVNRIEIGRGLVAGTAVVIVAILMDRI 274


>gi|167840043|ref|ZP_02466727.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis MSMB43]
          Length = 300

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +   C V      + W+   +                  +T+   +   I++ ++ IP
Sbjct: 49  MGLMMACFVGVGLWRVGWRFAIFTAASLFLIFATGFWDQTVVTLGLTLSSTIVSLVLGIP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW      +++ ++P   L+   PA V+            +   L   +  +      
Sbjct: 109 LGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G      +  E   +F  T W+    +  P   P  + G       A +  I+
Sbjct: 169 ----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVII 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 225 ASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|311104603|ref|YP_003977456.1| binding-protein-dependent transporter inner membrane component
           family protein 22 [Achromobacter xylosoxidans A8]
 gi|310759292|gb|ADP14741.1| binding-protein-dependent transport system inner membrane component
           family protein 22 [Achromobacter xylosoxidans A8]
          Length = 272

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ + ++   +A ++ +P+G+++G    +   + P  +     P   + P  +     
Sbjct: 80  LASLEKFLISFSLAVLLGVPLGLFMGRFKALDWAVAPVFEAFRFIPPIAWVPFAIFWFGT 139

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+P    +L++  G     + N   GA        E         W     I+LP   
Sbjct: 140 GFLSP----TLVIFAGAFAPCVLNAYRGAKQIDRALIEAGQMLGAGRWATLTEILLPASL 195

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + V G     G  W + I +E+       + +TGLG  I +         V+ G++ + 
Sbjct: 196 AHIVAGIRVGAGFGWQSLIGAELI------VGSTGLGYMIVQGGSNLEPAIVISGMITIG 249

Query: 564 CFVLALN 570
                ++
Sbjct: 250 LIGAGID 256



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  + L +  +++L          + + L   + P+ +  + IP + ++ F +
Sbjct: 75  LQMHLLASLEKFLISFSLAVLLGVPLGLFMGRFKALDWAVAPVFEAFRFIPPIAWVPFAI 134

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F   +        L+    IF         + Y+    I R L E  +      W   
Sbjct: 135 FWFGTGF--------LSPTLVIFAGAFAPCVLNAYRGAKQIDRALIEAGQMLGAGRWATL 186

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+  +V  + +    GW  ++ +E+IV         G+G  I       +   
Sbjct: 187 TEILLPASLAHIVAGIRVGAGFGWQSLIGAELIVGST------GLGYMIVQGGSNLEPAI 240

Query: 241 ILYAMLTMLGVIFLYD 256
           ++  M+T+  +    D
Sbjct: 241 VISGMITIGLIGAGID 256


>gi|300812812|ref|ZP_07093207.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496148|gb|EFK31275.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 506

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 15/209 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I  I+     + Q      L  + A+++S L       L A S+R G V+  I  I+Q+I
Sbjct: 5   INTISSHQGQIWQALGEHLLLSMEALLLSCLIAIPLGMLLAHSKRAGEVVFQITSIIQTI 64

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   + +               A+ A+    +  +  + Y +L NI  +LEE + 
Sbjct: 65  PSLALLGLLIPFVGIG--------TTPALIALTAYGIMPIYQNTYSALRNIDPNLEEAAD 116

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +F LS W+K   L  P ++P ++  + +S+         + MI  G       G+G+YI 
Sbjct: 117 AFGLSRWKKLSRLEFPIALPIILSGVSISLVMIIGTATLAAMIGAG-------GLGTYIM 169

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + I++ +   IL        +      LL
Sbjct: 170 IGIQQNNNTYILIGAGLSAVLTLAMSGLL 198



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I IP+G+ +         +     ++   P+     L++  V        + L+   
Sbjct: 33  SCLIAIPLGMLLAHSKRAGEVVFQITSIIQTIPSLALLGLLIPFVGIGTTPALIALTAYG 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      I  N  +       + +E A +F ++ W+    +  P   P  ++G   +   
Sbjct: 93  IM----PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISLVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
               + ++ +   G       GLG YI    ++ +   +++G  +     LA++  L   
Sbjct: 149 IIGTATLAAMIGAG-------GLGTYIMIGIQQNNNTYILIGAGLSAVLTLAMSGLL--K 199

Query: 577 LYLYGTRCLRL 587
                 +  R+
Sbjct: 200 FMASSKKHFRV 210


>gi|197295190|ref|YP_002153731.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944669|emb|CAR57273.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 285

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 10/246 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
               +   +        P    ++         L +    V  G        +   I++ 
Sbjct: 10  ALASRQPASPPRAARRDPLRAWRIAGLALPFAALVLLEVVVRRGWLPEHLVPAPSEILDT 69

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                V  V      +  RV       + + + VG  +G    + +  +P  Q L A P+
Sbjct: 70  LARMGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRVDALFEPTFQALRAIPS 129

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+++  +             L+  G  + +   V+AG         E+ + + +  
Sbjct: 130 LAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGP 185

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +R I+LP   P  VTG  T    AW   + +E+ +       T GLG  +++  E G
Sbjct: 186 LALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETG 239

Query: 551 SFPEVV 556
               V 
Sbjct: 240 RPDLVF 245



 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 102/265 (38%), Gaps = 20/265 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           PP  +RR     + +    L    + +L   ++   +P  +V      LD      V  +
Sbjct: 19  PPRAARRDPLRAWRIAGLALPFAALVLLEVVVRRGWLPEHLVPAPSEILDTLARMGVTRV 78

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   +TLR+ +          V       SRR+  +  P    +++IP L ++   ++
Sbjct: 79  ARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRVDALFEPTFQALRAIPSLAWVPVLLL 138

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E   I  I     + +  ++   + ++ R L E+   +RL     F 
Sbjct: 139 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFR 190

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +
Sbjct: 191 RILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 244

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
             A+L +  +  L D  + R    W
Sbjct: 245 FGAILLLALLGKLTDGAMRRIESRW 269


>gi|77461633|ref|YP_351140.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77385636|gb|ABA77149.1| putative aliphatic sulfonates ABC transport system, permease
           protein [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 99/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 15  VLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAISGWRAALGFTIGGS 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 75  IGLVLGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + N+   L E++RS+ LSG+  FW + +P ++P ++  +  ++ 
Sbjct: 127 VALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFWQVILPGALPSILVGVRFALG 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A+L    +  L D   + 
Sbjct: 187 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG 240

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 241 LERVWLRWHPAYQV 254



 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 83/244 (34%), Gaps = 12/244 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
           + F+   +   +  +L   W   V    +   I    +  I    +      +     I+
Sbjct: 2   KKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAIS 61

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R  +   I   I + +G   G        +    Q++   P     PLV+        
Sbjct: 62  GWRAALGFTIGGSIGLVLGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI--- 118

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  GT + I  N   G         E+A S+ ++G+  +  +ILPG  P  
Sbjct: 119 -DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFWQVILPGALPSI 177

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A G  W   IV+E  S       ++G+G     + E      VVL +L+     
Sbjct: 178 LVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLG 231

Query: 567 LALN 570
              +
Sbjct: 232 KLAD 235


>gi|295705437|ref|YP_003598512.1| putative taurine ABC transporter permease [Bacillus megaterium DSM
           319]
 gi|294803096|gb|ADF40162.1| putative taurine ABC transporter, permease protein [Bacillus
           megaterium DSM 319]
          Length = 262

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 81/189 (42%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +++R+   +++A +  IP+GI  G+  +I +   P  +     P   ++ L+V  +   
Sbjct: 71  ASLYRLFTALLLALLTAIPLGIICGYSKYILAIFDPIIEFYRPLPPLAYYALLVLWLGID 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+       +    +A     P D    A +   + +  + +IILP   P
Sbjct: 131 EGSK----VALLFLSAFAPLFIATVASVQRVPQDRINGALTLGASKFNVFIHIILPSALP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             VTG  T+ G  +   + +E+ +       T+G+G  + ++++      V +G++IM  
Sbjct: 187 DIVTGLRTSIGITYATLVAAEMVA------ATSGIGWMVLDASKYMRSDIVFVGIIIMGL 240

Query: 565 FVLALNRFL 573
             + ++  +
Sbjct: 241 IAIFIDSII 249



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  + S +  R+ +A++++LL       +   S+ +  +  PI++  + +P L +    
Sbjct: 64  SLVTHLSASLYRLFTALLLALLTAIPLGIICGYSKYILAIFDPIIEFYRPLPPLAYYALL 123

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++       KV    L+A   +F + V         S+  +P+D    + +   S +  
Sbjct: 124 VLWLGIDEGSKVALLFLSAFAPLFIATV--------ASVQRVPQDRINGALTLGASKFNV 175

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F ++ +P ++P +V  +  S+   +  +VA+EM+          GIG  +  A K     
Sbjct: 176 FIHIILPSALPDIVTGLRTSIGITYATLVAAEMVA------ATSGIGWMVLDASKYMRSD 229

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            +   ++ M  +    D ++
Sbjct: 230 IVFVGIIIMGLIAIFIDSII 249


>gi|16329886|ref|NP_440614.1| ABC transporter membrane protein [Synechocystis sp. PCC 6803]
 gi|1652372|dbj|BAA17294.1| integral membrane components of other binding-protein-dependent
           transport system [Synechocystis sp. PCC 6803]
          Length = 280

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 94/263 (35%), Gaps = 25/263 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------------D 375
           P  F ++      S    +    ++  + +     S+  + + F                
Sbjct: 19  PTVFWRIGGEIPESLKWSLMSLSIIIPLVLWALLSSLPTVSDVFLPSPQSVIQALIKLFK 78

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             ++I     +  RVV    +  ++ IP+GI +G  P I S  +P   ++   PA  F P
Sbjct: 79  DGFLIQDSLTSFGRVVGGFFLGGLVAIPLGILMGTFPSIRSLTEPIIGVVRYMPAPAFIP 138

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +     +       L+  GT ++    ++      P +  EV  +      +   
Sbjct: 139 LLIIYLGIDEASK----IALIFIGTIFFNTLMIMDAVKFIPKELIEVTYTLGGLRKQILF 194

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +I P I P  +         AWN  +V+E+ +         GLG  I  + +     E+
Sbjct: 195 KVITPYIIPNILDAFRINMAAAWNLVVVAELVA------ADNGLGKRILLAQKFLKTDEI 248

Query: 556 VLGVLIMCCFVLALN---RFLWH 575
              ++++     AL+   R +  
Sbjct: 249 FACLIVLGLIGFALDLSFRLILR 271



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 108/262 (41%), Gaps = 21/262 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQET------TVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
            + L++  ++I ++   L     T        P+ ++  +        L Q +  +  R+
Sbjct: 34  KWSLMSLSIIIPLVLWALLSSLPTVSDVFLPSPQSVIQALIKLFKDGFLIQDSLTSFGRV 93

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +    +  L       L      +  +  PI+ +++ +P   F+   ++Y          
Sbjct: 94  VGGFFLGGLVAIPLGILMGTFPSIRSLTEPIIGVVRYMPAPAFIPLLIIYLGID------ 147

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  IF   ++  T  +  ++  IP++L EV+ +      Q  + +  P+ +P +
Sbjct: 148 --EASKIALIFIGTIFFNTLMIMDAVKFIPKELIEVTYTLGGLRKQILFKVITPYIIPNI 205

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    ++M+  W  VV +E++   +      G+G  I LA K      I   ++ +  + 
Sbjct: 206 LDAFRINMAAAWNLVVVAELVAADN------GLGKRILLAQKFLKTDEIFACLIVLGLIG 259

Query: 253 FLYDQLLFRPMIVWSNKFRLER 274
           F  D L FR ++ ++ K+ LE+
Sbjct: 260 FALD-LSFRLILRFTCKWSLEQ 280


>gi|117164474|emb|CAJ88020.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces ambofaciens ATCC 23877]
          Length = 286

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 79/198 (39%), Gaps = 10/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y++    I++ R+     I     +  G+ +G    + S  +P+   L   P   +F L+
Sbjct: 87  YLVEHLGISLRRIAFGAGIGIGAGVVFGLLMGTVGWMRSLFEPWITFLRTLPPLAYFSLL 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             L+       +  +     +A P+   E A +   + W   R +
Sbjct: 147 IIWLGI----NEEPKITLLAVAAFPPVAVSTTTAVAAVPSSLIEAARALGASRWDVVRDV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  +TG   A G A+++ + +E+ +         G+G  + ++    + P V++
Sbjct: 203 LVPSALPETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVKDAANYNNTPVVLV 256

Query: 558 GVLIMCCFVLALNRFLWH 575
           G++ +    L ++  L  
Sbjct: 257 GIIAIGVSGLFIDGLLLR 274



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 79/201 (39%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+     I +    V+  L      +  +  P +  ++++P L + +  +
Sbjct: 88  LVEHLGISLRRIAFGAGIGIGAGVVFGLLMGTVGWMRSLFEPWITFLRTLPPLAYFSLLI 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            E   I  +  +    +  S   ++  +P  L E +R+   S W   
Sbjct: 148 IWLGIN--------EEPKITLLAVAAFPPVAVSTTTAVAAVPSSLIEAARALGASRWDVV 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P  +  + +++   +  +VA+E++        LPGIG  +  A    +   
Sbjct: 200 RDVLVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPV 253

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L  ++ +       D LL R
Sbjct: 254 VLVGIIAIGVSGLFIDGLLLR 274


>gi|296332306|ref|ZP_06874767.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305673583|ref|YP_003865255.1| aliphatic sulfonate ABC transporter permease [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296150224|gb|EFG91112.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305411827|gb|ADM36946.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 275

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 16/277 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     L +T        P           +   + I  + ++ G+ +  A      +  
Sbjct: 3   AEAAGSLPKTNAEAVRKKPGRMKYGWMKGLLLPAVIIAIWQIIGGLGVVSATVLPTPVAI 62

Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             T++++     +     I+++R  +  ++ + + + +GI+ GF       + P  Q+L 
Sbjct: 63  VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLIIGIFAGFSKRTELYLDPSLQMLR 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +    +      +   LL+  G  + +  N   G         EVA   
Sbjct: 123 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                +    +ILP   P  + G   + G AW   +V+E+         ++G+G  I ++
Sbjct: 179 EFKWHQQISKVILPASLPNILLGIRLSLGIAWLGLVVAELMG------SSSGVGYMIMDA 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +     +V  G++I        +   R L   L  +
Sbjct: 233 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 269



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              + +  II  L +        P  IV      +    L  +   +  R     ++   
Sbjct: 36  AVIIAIWQIIGGLGVVSATVLPTPVAIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A  S+R  + L P L +++++P L      +++F      K++   L A F 
Sbjct: 96  LGLIIGIFAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L EV+R       Q+   + +P S+P ++  + +S+ 
Sbjct: 156 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPASLPNILLGIRLSLG 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          G+G  I  A +      +   ++    V  L D   +L
Sbjct: 208 IAWLGLVVAELMGSSS------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 261

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 262 LERKLLKWRNSYE 274


>gi|91777497|ref|YP_552705.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690157|gb|ABE33355.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 279

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 86/262 (32%), Gaps = 22/262 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------- 376
           R  +  +        + ++   + W      V +      +G I                
Sbjct: 8   RDSYVASTRSYLGLSKSAFYRWLSWIVPAVVVVLWQIASRVGLIAPQVLPAPSSVLTTAL 67

Query: 377 -----LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +     +++ R      I   I + +G+ +GF P   + +    Q++ A P  
Sbjct: 68  DLATHGDLFVHLGVSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFL 127

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PLV+           +    L+     + I  N + G         E+A    +   
Sbjct: 128 AMLPLVIVWFGVG----EVAKIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVVGLDWP 183

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              R IILPG  P  +TG   A   AW A +++E  +       T G+G    ++ E   
Sbjct: 184 AVVRRIILPGAMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQ 237

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              ++L ++I     +  +  +
Sbjct: 238 TNVILLTIIIYAIIGVVADALV 259



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 91/259 (35%), Gaps = 18/259 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + +       V++  I + +     +    P  ++           L  +   + LR  +
Sbjct: 29  WLSWIVPAVVVVLWQIASRVGLIAPQVLPAPSSVLTTALDLATHGDLFVHLGVSLLRAAA 88

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I          L   S     +L   + ++++IP L  L   +V+F           
Sbjct: 89  GFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG-------- 140

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E+A IF +  + ++ +  +    +  I   L E+++   L        + +P +MP ++ 
Sbjct: 141 EVAKIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVVGLDWPAVVRRIILPGAMPSILT 200

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +++  W  +V +E +          GIG     A +      IL  ++    +  +
Sbjct: 201 GVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIIIYAIIGVV 254

Query: 255 YD---QLLFRPMIVWSNKF 270
            D   +LL    + W   +
Sbjct: 255 ADALVRLLEAHFLTWHANY 273


>gi|311107976|ref|YP_003980829.1| binding-protein-dependent transporter inner membrane component
           family protein 52 [Achromobacter xylosoxidans A8]
 gi|310762665|gb|ADP18114.1| binding-protein-dependent transport system inner membrane component
           family protein 52 [Achromobacter xylosoxidans A8]
          Length = 285

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   M+ A  +S++       L A+   L  +++P+LD+MQ++P   +L   
Sbjct: 88  GLWDAGMQTLALMIMAAGLSVIIGIPLGVLMARINWLRSIMLPVLDVMQTMPSFVYLIPV 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F           ++ AI A     V  +       +  + R++ E SR+F  +  Q+
Sbjct: 148 VMLFGLG--------KIPAIIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGANPRQQ 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  +       VV + MI          G+G  + L I   ++ 
Sbjct: 200 LFGVQLPLALPNIMAGINQTTMMALSMVVIASMI-------GARGLGYEVLLGINRLEVG 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ +  L+D++
Sbjct: 253 RGLLAGLGIVVLAVLFDRI 271



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 11/198 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
            VL +   G  T+  +++   ++ II IP+G+ +     + S + P   ++   P+ V+ 
Sbjct: 85  GVLGLWDAGMQTLALMIMAAGLSVIIGIPLGVLMARINWLRSIMLPVLDVMQTMPSFVYL 144

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             VV           +   +  +      ++     G      +  E + +F     +  
Sbjct: 145 IPVVMLFGLG----KIPAIIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGANPRQQL 200

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   P  + G       A +  +++ +           GLG  +     +     
Sbjct: 201 FGVQLPLALPNIMAGINQTTMMALSMVVIASMIG-------ARGLGYEVLLGINRLEVGR 253

Query: 555 VVLGVLIMCCFVLALNRF 572
            +L  L +    +  +R 
Sbjct: 254 GLLAGLGIVVLAVLFDRI 271


>gi|89894272|ref|YP_517759.1| hypothetical protein DSY1526 [Desulfitobacterium hafniense Y51]
 gi|89333720|dbj|BAE83315.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 254

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 91/235 (38%), Gaps = 22/235 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLY------------VIWLGCITMFRVVVLIIIAS 398
           ++  + IG+AWQ +  ++    +                 ++    ++++RV + +++A+
Sbjct: 17  LITVLLIGLAWQILSMLLETTAFPPPWEALQSFGELFFSELMPHLQVSLYRVGISLMVAA 76

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++ IP+G+++G      +   PF  L    P  VF P+ +  +    ++      +++  
Sbjct: 77  LLGIPLGLFLGKNKRADAWSAPFLYLTFPVPKVVFLPIFLILLGIGDVSK----IVMITL 132

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              + I+      A    +++     S   +    +R++  P   P  +T      G A 
Sbjct: 133 IVFYQIVVTTRDAARNVQHEYVLSVESLRASTLELYRHVYFPACLPSILTSLKLGLGTAM 192

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + E       +    G+G +I  S    ++ ++  G++ M      +   L
Sbjct: 193 AILFLVE------TYATQEGIGYFIMNSWSSLAYDKMFAGIIAMGLMGFLIYLLL 241



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 92/255 (36%), Gaps = 16/255 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV--PRDIVDIVPITLDVHSLPQY 64
           +P    + +   ++  L  VL+IG+   +L  + ETT   P          L    L  +
Sbjct: 1   MPGMPLKSLTSKVYTTLITVLLIGLAWQILSMLLETTAFPPPWEALQSFGELFFSELMPH 60

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+  +++++ L          K++R      P L +   +P + FL   ++   
Sbjct: 61  LQVSLYRVGISLMVAALLGIPLGLFLGKNKRADAWSAPFLYLTFPVPKVVFLPIFLILLG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     +++ I  I     + +  +   +  N+  +      S R S  + + ++ 
Sbjct: 121 IG--------DVSKIVMITLIVFYQIVVTTRDAARNVQHEYVLSVESLRASTLELYRHVY 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P  +P ++ ++ + +      +   E      T     GIG +I  +        +   
Sbjct: 173 FPACLPSILTSLKLGLGTAMAILFLVE------TYATQEGIGYFIMNSWSSLAYDKMFAG 226

Query: 245 MLTMLGVIFLYDQLL 259
           ++ M  + FL   LL
Sbjct: 227 IIAMGLMGFLIYLLL 241


>gi|269955520|ref|YP_003325309.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
 gi|269304201|gb|ACZ29751.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
          Length = 302

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 101/254 (39%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RI+P +  +   +++   ++   +  +     PR +   +       SL +    +  R
Sbjct: 47  KRIWPPLLAVAVVLVIWQAVVWSGIQPLWNLPGPRQVATAIGNAAADGSLWEALVTSLSR 106

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   + ++        + A+ + + +   PI+  +Q +P + ++   +++F        
Sbjct: 107 GVLGFLAAVAIGTPLGIIVARVKFVRVTFGPIITGLQVLPSVAWVPAAIIWFGLSDG--- 163

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                   F +    V ++   +   +  +P  L  V R            + +P ++PG
Sbjct: 164 -----TVYFVVLMGAVPSIINGIVAGVDQVPPLLRSVGRVLGAGRLAMVTEIVLPAALPG 218

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I VG ++    G+G ++    +  D+  +  A+L +L V
Sbjct: 219 YLAGLKQGWAFSWRSLMAAEIIAVGGSIG--FGLGQFLDQGRQLADMSLVFTAILLILAV 276

Query: 252 IFLYDQLLFRPMIV 265
               +  LF P+  
Sbjct: 277 GIAVELALFAPVER 290



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 16/263 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------ 385
            +  +         +    VV  +   + W  I  + N    + V   I           
Sbjct: 39  QRGAAAAWKRIWPPLLAVAVVLVIWQAVVWSGIQPLWNLPGPRQVATAIGNAAADGSLWE 98

Query: 386 ----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ R V+  + A  I  P+GI +     +     P    L   P+  + P  +   
Sbjct: 99  ALVTSLSRGVLGFLAAVAIGTPLGIIVARVKFVRVTFGPIITGLQVLPSVAWVPAAIIWF 158

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                     +  +++ G    I+  ++AG    P   + V              I+LP 
Sbjct: 159 GLSDGT----VYFVVLMGAVPSIINGIVAGVDQVPPLLRSVGRVLGAGRLAMVTEIVLPA 214

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P Y+ G       +W + + +E+ + G       GLG ++ +  +      V   +L+
Sbjct: 215 ALPGYLAGLKQGWAFSWRSLMAAEIIAVGGSI--GFGLGQFLDQGRQLADMSLVFTAILL 272

Query: 562 MCCFVLALNRFLWHPLYLYGTRC 584
           +    +A+   L+ P+     R 
Sbjct: 273 ILAVGIAVELALFAPVERAVLRR 295


>gi|241895789|ref|ZP_04783085.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Weissella
           paramesenteroides ATCC 33313]
 gi|241870832|gb|EER74583.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Weissella
           paramesenteroides ATCC 33313]
          Length = 255

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 12/240 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIVNHFTYQDVLYVIWLGCIT 386
           +  ++      +   + I W  +V    I   +            T      +     I+
Sbjct: 8   KRHIEGALPWLIPVAIIIIWEVIVDAGMIDTTYVPSPSAVGSQAITLWQEGTLQQNIGIS 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++R  + ++I   I   +G+  G     +       Q++   P     PL++  +     
Sbjct: 68  LYRATIGLLIGGTIGFTLGVANGLSRISNLLFNSTVQMIRNIPHLALIPLIIIWLGIG-- 125

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + I  N + G  +      E+  S+ ++ W+    II PG  P  
Sbjct: 126 --EPAKVTLVAIGVMFPIYINTLHGIQSIDPKLIEMGRSYQLSKWQMLTKIIFPGAMPTI 183

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A G  W   IVSE  S       ++G+G     + +    P + L ++I     
Sbjct: 184 LMGIRYALGVMWTTLIVSETIS------SSSGIGYMETNAQQFLDMPTIFLAIIIYAILG 237



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           +A +++  +I                V    ITL    +L Q    +  R    ++I   
Sbjct: 21  VAIIIIWEVIVDAGMIDTTYVPSPSAVGSQAITLWQEGTLQQNIGISLYRATIGLLIGGT 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F        SR   ++    + ++++IP L  +   +++     P        A +  
Sbjct: 81  IGFTLGVANGLSRISNLLFNSTVQMIRNIPHLALIPLIIIWLGIGEP--------AKVTL 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    + +I   L E+ RS++LS WQ    +  P +MP ++  +  ++ 
Sbjct: 133 VAIGVMFPIYINTLHGIQSIDPKLIEMGRSYQLSKWQMLTKIIFPGAMPTILMGIRYALG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W  ++ SE I          GIG     A +  D+  I  A++    +  + D +
Sbjct: 193 VMWTTLIVSETISSSS------GIGYMETNAQQFLDMPTIFLAIIIYAILGKVSDWI 243


>gi|289434283|ref|YP_003464155.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170527|emb|CBH27067.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313633934|gb|EFS00646.1| glycine betaine transport system permease protein opuAB [Listeria
           seeligeri FSL N1-067]
          Length = 282

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+G   +   G +   +  ++V ++ I        +  ++T   +L++ +I+L+
Sbjct: 52  LFIILLVLGTFWVNRKGKKWGLITFEVVGLLLIW--NLDFWRDMTQTLTLVLTSSLIALI 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  +  P+LD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 110 IGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +  +L E + SF  + WQK W + +P +   ++  +  S+ 
Sbjct: 167 MP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A + ++ V  + D+L
Sbjct: 222 LALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA II +
Sbjct: 53  FIILLVLGTFWVNRKGKKWGLITFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALIIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|330980359|gb|EGH78473.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 285

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 87/232 (37%), Gaps = 14/232 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++    I    Q  G + +     ++ + +W   +++ R ++ + I   I +   +  G
Sbjct: 58  GLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW---VSLQRALLGLSIGVSIGVVAALVTG 114

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +    Q+L   P+    PL +                L++ GT + +  N+ 
Sbjct: 115 LSRRGEIVLDSPMQMLRTIPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLF 170

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +G         E A++  ++      ++ILPG  P +  G   + G +W A +  E  + 
Sbjct: 171 SGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQIN- 229

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
                 T G+G   +++ +      +V+ +LI     L ++  +   L  Y 
Sbjct: 230 -----TTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAII-RTLERYA 275



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTF 282


>gi|325122235|gb|ADY81758.1| sulfonate/nitrate/taurine transport system permease protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 262

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 93/214 (43%), Gaps = 16/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L      +  +     ++  +   +  TL A S+ L  ++ P+ + ++ +P+LG 
Sbjct: 60  LETGELWLNTWGSLKKAGIGFILGSISGLILGTLLAYSKVLNALVSPLFNSIRQVPLLGL 119

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                ++F N         E A IF I  +  + +  + +Q L +     +E++R ++ S
Sbjct: 120 TPLIALWFGNG--------EEAKIFIIALASFFPLVINTFQGLSHNDAKYDEIARIYQFS 171

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+KF  + +P ++P ++  + +++   W    ASE++          G+G+ +  A   
Sbjct: 172 FWRKFKKIRLPQALPHILTGLNLAVPFTWITTTASELLFNAGA-----GLGNLMMKAEIN 226

Query: 236 QDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
            ++  +L   +T+            L+ + ++ W
Sbjct: 227 AEMDILLVCAITVTLCGAFMTASIHLISKRLLQW 260



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 74/198 (37%), Gaps = 12/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ +  +  I+ SI  + +G  + +   +++ + P    +   P     PL+        
Sbjct: 72  SLKKAGIGFILGSISGLILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFG--- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N       ++   + + ++ N   G S     + E+A  +  + WR ++ I LP   P+
Sbjct: 129 -NGEEAKIFIIALASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPH 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM--- 562
            +TG   A    W  +  SE+           GLG  + ++        +++  + +   
Sbjct: 188 ILTGLNLAVPFTWITTTASELLFNAG-----AGLGNLMMKAEINAEMDILLVCAITVTLC 242

Query: 563 CCFVLALNRFLWHPLYLY 580
             F+ A    +   L  +
Sbjct: 243 GAFMTASIHLISKRLLQW 260


>gi|163796842|ref|ZP_02190799.1| ABC transport system permease protein [alpha proteobacterium
           BAL199]
 gi|159177831|gb|EDP62380.1| ABC transport system permease protein [alpha proteobacterium
           BAL199]
          Length = 279

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 17/248 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---- 385
                    R+  +  +     +  V+    W    ++    T        + G +    
Sbjct: 23  RRKIAVPWMRLISLASVVTVMTLWYVSTEYGWILPIFLPKPATVWQEAQGAFAGGLLLTD 82

Query: 386 ---TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +  RV +   +A I+ IP+G+ +       + + PF  LL   P+  + PL +  + 
Sbjct: 83  VWMSSKRVFLGFALAGIVAIPLGVAMAIWAPAKAILDPFVSLLRPLPSITWIPLTMLWLG 142

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       ++  G+  YIL                 A +           +I PG 
Sbjct: 143 IGESQK----VAIVFMGSWIYILLYTYESTKRVDPLLIRAARNLGARDIDVMYEVIFPGA 198

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TG       +W+  + +E+ +         GLGA I ++ + G+   V++G+L +
Sbjct: 199 LPGIITGLKVTLAISWSCVLSAEMVA------AQNGLGAMIWQAKDWGNLALVLVGMLSI 252

Query: 563 CCFVLALN 570
              VL  +
Sbjct: 253 SITVLVAD 260



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +            L      ++ R+     ++ +         A       +L 
Sbjct: 60  LPKPATVWQEAQGAFAGGLLLTDVWMSSKRVFLGFALAGIVAIPLGVAMAIWAPAKAILD 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++ +P + ++  T+++            E   +  +F      +    Y+S   +
Sbjct: 120 PFVSLLRPLPSITWIPLTMLWLGIG--------ESQKVAIVFMGSWIYILLYTYESTKRV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L   +R+         + +  P ++PG++  + ++++  W  V+++EM+   +    
Sbjct: 172 DPLLIRAARNLGARDIDVMYEVIFPGALPGIITGLKVTLAISWSCVLSAEMVAAQN---- 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             G+G+ I  A    +L  +L  ML++   + + DQ+   + R ++ W
Sbjct: 228 --GLGAMIWQAKDWGNLALVLVGMLSISITVLVADQVANRIERLLLPW 273


>gi|298372810|ref|ZP_06982800.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275714|gb|EFI17265.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 258

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 21/254 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
             YN+        I   +F+L+  VL + + N +L        P D+  I+P    V  +
Sbjct: 5   RQYNVYATIRKLCIGVVVFNLIWLVLALALRNKILPN------PIDVYRIMPQEF-VAGM 57

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   +  R+L+ +VI+LLF  V     A S+RL  +L P+L +   +P L  L   ++
Sbjct: 58  GRHVMASLWRVLAGIVIALLFGVVGGLATAFSKRLNKILEPLLYLSYPVPKLALLPVVMI 117

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F           E + I  I    V+ +  S+  ++ +IPRD   V  S   + WQ   
Sbjct: 118 VFGID--------EASKIVMIVLIVVFQLMISIRDAIRHIPRDNYYVLMSLGATKWQNIR 169

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P ++P +   + +++       +A  ++ V +T     G+G +   A    D + +
Sbjct: 170 HIIIPATLPSIFSALRVTVG------IAVSVLFVTETFGTDKGLGFFTVDAWMRLDYIKM 223

Query: 242 LYAMLTMLGVIFLY 255
              ++++  + FL 
Sbjct: 224 YAGIVSISVIGFLL 237



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 92/246 (37%), Gaps = 13/246 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--- 383
             +    + +  R   +  + +  +   +A+ +  + +   ++ +      +V  +G   
Sbjct: 2   IDKRQYNVYATIRKLCIGVVVFNLIWLVLALALRNKILPNPIDVYRIMPQEFVAGMGRHV 61

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++RV+  I+IA +  +  G+   F   ++  ++P   L    P     P+V+     
Sbjct: 62  MASLWRVLAGIVIALLFGVVGGLATAFSKRLNKILEPLLYLSYPVPKLALLPVVMIVFGI 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     ++++    + ++ ++       P D   V  S   T W+  R+II+P   
Sbjct: 122 ----DEASKIVMIVLIVVFQLMISIRDAIRHIPRDNYYVLMSLGATKWQNIRHIIIPATL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   +      G A +   V+E            GLG +  ++  +  + ++  G++ + 
Sbjct: 178 PSIFSALRVTVGIAVSVLFVTETFGTDK------GLGFFTVDAWMRLDYIKMYAGIVSIS 231

Query: 564 CFVLAL 569
                L
Sbjct: 232 VIGFLL 237


>gi|307727848|ref|YP_003911061.1| choline ABC transporter permease [Burkholderia sp. CCGE1003]
 gi|307588373|gb|ADN61770.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1003]
          Length = 300

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTFISLVLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 11/247 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              E+F  +  +   +  +       V      + W+   + +                I
Sbjct: 31  KVIESFAAIVEHGLQAVPMWALMAFFVGIGLWRVGWRFALFTLLAMLLIYGTGFWDQMVI 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    I+ ++ +P+GIW      +   ++P   L+   PA V+            
Sbjct: 91  TLGLTLSSTFISLVLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGR 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L   +  +             G      +  E   +F  T W+    +  P   P 
Sbjct: 151 VPGILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       A +  I++ +   G       GLG  +  S ++          L +   
Sbjct: 207 IMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVML 259

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 260 AIILDRI 266


>gi|282897425|ref|ZP_06305427.1| Integral membrane components of other binding- protein-dependent
           transport system [Raphidiopsis brookii D9]
 gi|281198077|gb|EFA72971.1| Integral membrane components of other binding- protein-dependent
           transport system [Raphidiopsis brookii D9]
          Length = 263

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+   ++A++I IP+G+ +G  P + +  +P   +    PA  F PL++     
Sbjct: 71  GFSLLRVLGGFLLAAVISIPLGVLMGSFPVVRALFEPAISIFRYMPAPAFIPLLILYFGL 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+  GT ++    ++        +  E + +      +    +ILP I 
Sbjct: 131 GET----PKILLIFIGTVFFNTLMIMDAVKFVSRELIETSYTLGGKNHQIILQVILPFIV 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +         +WN  IV+E+ +       T GLG  I+ +       E+  G++++ 
Sbjct: 187 PNIIDACRVNMAASWNLVIVAELVA------ATEGLGRRISVAQRFLKTDEIFAGLIVIG 240

Query: 564 CFVLALNRFL 573
              + ++  L
Sbjct: 241 LIGVVIDILL 250



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 87/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ ++  +       +L      + LR+L   +++ + +     L      +  +  
Sbjct: 47  LPTPQAVLTALQKLWATGNLQTDIGFSLLRVLGGFLLAAVISIPLGVLMGSFPVVRALFE 106

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + I + +P   F+   ++YF      K        I  IF   V+  T  +  ++  +
Sbjct: 107 PAISIFRYMPAPAFIPLLILYFGLGETPK--------ILLIFIGTVFFNTLMIMDAVKFV 158

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R+L E S +      Q    + +PF +P ++    ++M+  W  V+ +E++   +    
Sbjct: 159 SRELIETSYTLGGKNHQIILQVILPFIVPNIIDACRVNMAASWNLVIVAELVAATE---- 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I++A +      I   ++ +  +  + D LL
Sbjct: 215 --GLGRRISVAQRFLKTDEIFAGLIVIGLIGVVIDILL 250


>gi|222080828|ref|YP_002540191.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
 gi|221725507|gb|ACM28596.1| nitrate ABC transporter [Agrobacterium radiobacter K84]
          Length = 280

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 99/265 (37%), Gaps = 17/265 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            R     I   +  +     +       +    P  +   +        L  +   TT+R
Sbjct: 29  GRATVAIILPAIGLLFWEVAVAAGWFSGRLMPPPSKVAATLWALSKSGELFTHIGITTVR 88

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    +I  +   +   +         ++ P L  ++SIP + ++   +++F        
Sbjct: 89  VFFGFIIGAVTATIAGAVTGYFGLARRLIDPSLQALRSIPSIAWVPLFILWFGIF----- 143

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + +  I     + +   +  ++ ++ R + EV R FRLSG+     + +P   P 
Sbjct: 144 ---EASKVALIAVGVFFPVYLGVSGAILSVDRKIVEVGRIFRLSGFALVRRVMLPAVFPA 200

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +   +  GW FVVA+E +   +      G+G  +    +      I+ A++T   +
Sbjct: 201 YVTALRSGLGLGWMFVVAAEFMGASE------GLGYLLVDGQQMGKPDQIMAAIITFAVI 254

Query: 252 IFLYDQLLF---RPMIVWSNKFRLE 273
             L D LL     P + W + +R E
Sbjct: 255 GKLTDSLLLAVTAPFLTWQDSYRRE 279



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 71/197 (36%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT  RV    II ++     G   G+       I P  Q L + P+  + PL
Sbjct: 76  GELFTHIGITTVRVFFGFIIGAVTATIAGAVTGYFGLARRLIDPSLQALRSIPSIAWVPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +     +  +       L+  G  + +   V     +      EV   F ++G+   R 
Sbjct: 136 FILWFGIFEASK----VALIAVGVFFPVYLGVSGAILSVDRKIVEVGRIFRLSGFALVRR 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP +FP YVT   +  G  W   + +E          + GLG  + +  + G   +++
Sbjct: 192 VMLPAVFPAYVTALRSGLGLGWMFVVAAEFMG------ASEGLGYLLVDGQQMGKPDQIM 245

Query: 557 LGVLIMCCFVLALNRFL 573
             ++         +  L
Sbjct: 246 AAIITFAVIGKLTDSLL 262


>gi|306841729|ref|ZP_07474415.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306288134|gb|EFM59521.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 301

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDTVASIVRPILDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDTVASIVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|219668685|ref|YP_002459120.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219538945|gb|ACL20684.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 251

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 91/235 (38%), Gaps = 22/235 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLY------------VIWLGCITMFRVVVLIIIAS 398
           ++  + IG+AWQ +  ++    +                 ++    ++++RV + +++A+
Sbjct: 14  LITVLLIGLAWQILSMLLETTAFPPPWEALQSFGELFFSELMPHLQVSLYRVGISLMVAA 73

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++ IP+G+++G      +   PF  L    P  VF P+ +  +    ++      +++  
Sbjct: 74  LLGIPLGLFLGKNKRADAWSAPFLYLTFPVPKVVFLPIFLILLGIGDVSK----IVMITL 129

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              + I+      A    +++     S   +    +R++  P   P  +T      G A 
Sbjct: 130 IVFYQIVVTTRDAARNVQHEYVLSVESLRASTLELYRHVYFPACLPSILTSLKLGLGTAM 189

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + E       +    G+G +I  S    ++ ++  G++ M      +   L
Sbjct: 190 AILFLVE------TYATQEGIGYFIMNSWSSLAYDKMFAGIIAMGLMGFLIYLLL 238



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 88/249 (35%), Gaps = 16/249 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++ +++  +  +L   L   I+++LL           +     +      L  +   +  
Sbjct: 6   LTSKVYTTLITVLLIGLAWQILSMLLETTAFPPPWEALQSFGELFFS--ELMPHLQVSLY 63

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  +++++ L          K++R      P L +   +P + FL   ++         
Sbjct: 64  RVGISLMVAALLGIPLGLFLGKNKRADAWSAPFLYLTFPVPKVVFLPIFLILLGIG---- 119

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +++ I  I     + +  +   +  N+  +      S R S  + + ++  P  +P
Sbjct: 120 ----DVSKIVMITLIVFYQIVVTTRDAARNVQHEYVLSVESLRASTLELYRHVYFPACLP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++ ++ + +      +   E      T     GIG +I  +        +   ++ M  
Sbjct: 176 SILTSLKLGLGTAMAILFLVE------TYATQEGIGYFIMNSWSSLAYDKMFAGIIAMGL 229

Query: 251 VIFLYDQLL 259
           + FL   LL
Sbjct: 230 MGFLIYLLL 238


>gi|134097165|ref|YP_001102826.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005378|ref|ZP_06563351.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909788|emb|CAL99900.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 265

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 12/219 (5%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +    A +      +     DV  V      ++ R+    +IA ++ + +G  +G     
Sbjct: 39  IVATAAVKWFSGPASSLFLSDV--VFSDLLASIGRIAAGWLIAVVVGVGIGTALGRSRTA 96

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
                P    + A P  V  P+ +  +             +++FG  W IL N + G  +
Sbjct: 97  MDYFGPLFAFVRAIPPPVLVPVFMVLLGIG----TSMQITVIVFGVVWPILLNTVDGVRS 152

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 + A SF I   +W   ++LP   P    G   +   A    +VSE+        
Sbjct: 153 VDQVKVDTARSFRIPPVQWVFGVVLPAAMPKIFAGLRVSLSLALVLMVVSELVG------ 206

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            T G+G  +  S ++   P +  G++++     ALN  L
Sbjct: 207 STNGIGYQLVNSQQQFDLPGMWTGIVLLGVLGYALNTVL 245



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 14/196 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+ +  +I+++      T   +SR       P+   +++IP    +   +V   
Sbjct: 65  LLASIGRIAAGWLIAVVVGVGIGTALGRSRTAMDYFGPLFAFVRAIPPPVLVPVFMVLLG 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         I  I    VW +  +    + ++ +   + +RSFR+   Q  + + 
Sbjct: 125 IG--------TSMQITVIVFGVVWPILLNTVDGVRSVDQVKVDTARSFRIPPVQWVFGVV 176

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP +   + +S+S     +V SE++   +      GIG  +  + ++ DL  +   
Sbjct: 177 LPAAMPKIFAGLRVSLSLALVLMVVSELVGSTN------GIGYQLVNSQQQFDLPGMWTG 230

Query: 245 MLTMLGVIFLYDQLLF 260
           ++ +  + +  + +L 
Sbjct: 231 IVLLGVLGYALNTVLL 246


>gi|19552443|ref|NP_600445.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62390109|ref|YP_225511.1| aliphatic sulfonate ABC transporter transmembrane protein
           [Corynebacterium glutamicum ATCC 13032]
 gi|21323988|dbj|BAB98614.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325445|emb|CAF19925.1| ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN
           [Corynebacterium glutamicum ATCC 13032]
          Length = 256

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    ++  RV++   + +++ I +G+  G      + + P  Q   A P     PL
Sbjct: 57  GTLLDALLVSSQRVLLGFALGAVLGISLGVLTGMSRFADTAVDPLIQAARALPHLGLVPL 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       L       L++  G  + +  N  +G         E         ++  R 
Sbjct: 117 FIIWFGIGEL----PKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGHVMGFGFFQRLRT 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P   P    G   A   AW + IV+E  +         GLG  I  + +      V+
Sbjct: 173 IIIPSAAPQLFVGLRQASAAAWLSLIVAEQVN------AREGLGFLINNARDFYRTDLVI 226

Query: 557 LGVLIMCCFVLALNRFL 573
            G+++     L     +
Sbjct: 227 FGLIVYASLGLLSEALI 243



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I+          +L      ++ R+L    +  +       L   SR     + 
Sbjct: 40  LPAPTTILAASWEVATNGTLLDALLVSSQRVLLGFALGAVLGISLGVLTGMSRFADTAVD 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++   +++P LG +   +++F           EL  +  I    ++ +  +       I
Sbjct: 100 PLIQAARALPHLGLVPLFIIWFGIG--------ELPKVLIISLGVLYPLYLNTASGFRQI 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E         +Q+   + +P + P L   +  + +  W  ++ +E +        
Sbjct: 152 DPKLLEAGHVMGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLIVAEQV------NA 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A        +++ ++    +  L + L+
Sbjct: 206 REGLGFLINNARDFYRTDLVIFGLIVYASLGLLSEALI 243


>gi|168179101|ref|ZP_02613765.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|187776832|ref|ZP_02993305.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC
           15579]
 gi|226950677|ref|YP_002805768.1| ABC transporter permease [Clostridium botulinum A2 str. Kyoto]
 gi|182670213|gb|EDT82189.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|187775491|gb|EDU39293.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC
           15579]
 gi|226842851|gb|ACO85517.1| ABC transporter, permease protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 213

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 4/145 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL 
Sbjct: 73  EIMTNLLITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLT 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +                L+ F   + ++ N IAG      D+   A S     W  +  I
Sbjct: 133 IVWFGIGDG----PTIFLITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNI 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522
           ILP   P  +TGA  A  G W + I
Sbjct: 189 ILPASIPDILTGARIAISGGWMSVI 213



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  ++V  ++            P+         L    +      T  R+L   + +++
Sbjct: 35  MVILIIVWYLLAEHYGNELILPTPKRTGKAFIKCLTSSEIMTNLLITLNRVLKGFMYAMI 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                       +    ++   +D ++ +PI+ ++  T+V+F               IF 
Sbjct: 95  IGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIGDGP--------TIFL 146

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S ++ +  +    + NI +D    +RS     W  F  + +P S+P ++    +++S
Sbjct: 147 ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAIS 206

Query: 202 GGWFFVV 208
           GGW  V+
Sbjct: 207 GGWMSVI 213


>gi|26990271|ref|NP_745696.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24985221|gb|AAN69160.1|AE016550_2 amino acid transporter permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 299

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +L +  + +L       L A       +L+P+LD+MQ++P   +L   
Sbjct: 107 GLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAFVYLIPV 166

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ A+FA     +  +       L  I   L + +     S WQ+
Sbjct: 167 LMLFGLG--------KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQR 218

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  S+      VV + MI          G+G  +   I+  ++ 
Sbjct: 219 LRRIALPLALPSIMAGLNQSVMMALSMVVVASMI-------GARGLGEDVLAGIQTLNVG 271

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  + D++
Sbjct: 272 QGMEAGLAIVALAMVIDRI 290



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 11/208 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V       +L +      T+  V+V   +  ++ +P+GI +  RP     + P   +
Sbjct: 94  AVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDV 153

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA V+   V+           +      +      ++     G S       + A 
Sbjct: 154 MQTLPAFVYLIPVLMLFGLG----KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAH 209

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               + W+  R I LP   P  + G   +   A +  +V+ +           GLG  + 
Sbjct: 210 GLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIG-------ARGLGEDVL 262

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +  +  + +   L +    + ++R 
Sbjct: 263 AGIQTLNVGQGMEAGLAIVALAMVIDRI 290


>gi|300310817|ref|YP_003774909.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300073602|gb|ADJ63001.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 256

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 92/249 (36%), Gaps = 23/249 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLG------C 384
            R       F   V+  V   + WQ +    +         T+   L +I  G       
Sbjct: 6   GRRLKAARPFLISVIAIVGGLVLWQLVSLTTSPLFLPSVSMTWAAALELISDGTLQQSVL 65

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  R++       +I +P+GI++G    +   + P+ +     P   F  L V  +   
Sbjct: 66  ASSGRILAGWGAGVVIGVPLGIFMGRFETVRQLLDPYIEFFRFIPPIAFVTLAVIWLGPG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+       L+ + T + +  N IAG  A        A+S     W+    +ILP   P
Sbjct: 126 ELSK----IALIFYTTVFIVTLNTIAGVQAVNPLRLRAAASLGAGQWKILSTVILPSTVP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + VTGA  A G ++   + +E+ S         GLGA I  +        V +G++ +  
Sbjct: 182 FMVTGARIAMGNSFLTVVSAEIVS------AREGLGALIWTARNFSRTEWVFVGIIALGI 235

Query: 565 FVLALNRFL 573
                +R L
Sbjct: 236 LGYLFDRVL 244



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 102/248 (41%), Gaps = 15/248 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R    ++  ++  +++  ++++    +   +V       + + +   +L Q    ++ R
Sbjct: 12  ARPFLISVIAIVGGLVLWQLVSLTTSPLFLPSVSMTWAAALEL-ISDGTLQQSVLASSGR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+     ++          +   +  +L P ++  + IP + F+T  V++         
Sbjct: 71  ILAGWGAGVVIGVPLGIFMGRFETVRQLLDPYIEFFRFIPPIAFVTLAVIWLGPG----- 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              EL+ I  IF + V+ +T +    +  +       + S     W+    + +P ++P 
Sbjct: 126 ---ELSKIALIFYTTVFIVTLNTIAGVQAVNPLRLRAAASLGAGQWKILSTVILPSTVPF 182

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V    ++M   +  VV++E++          G+G+ I  A        +   ++ +  +
Sbjct: 183 MVTGARIAMGNSFLTVVSAEIVS------AREGLGALIWTARNFSRTEWVFVGIIALGIL 236

Query: 252 IFLYDQLL 259
            +L+D++L
Sbjct: 237 GYLFDRVL 244


>gi|330897252|gb|EGH28671.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 285

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 86/232 (37%), Gaps = 14/232 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++    I    Q  G + +     ++ + +W   +++ R +  + I   I +   +  G
Sbjct: 58  GLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW---VSLQRALSGLSIGVSIGVVAALVTG 114

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +    Q+L   P+    PL +                L++ GT + +  N+ 
Sbjct: 115 LSRRGEIVLDSPMQMLRTIPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLF 170

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +G         E A++  ++      ++ILPG  P +  G   + G +W A +  E  + 
Sbjct: 171 SGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQIN- 229

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
                 T G+G   +++ +      +V+ +LI     L ++  +   L  Y 
Sbjct: 230 -----TTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAII-RTLERYA 275



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R LS + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALSGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTF 282


>gi|325923172|ref|ZP_08184860.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
 gi|325546348|gb|EGD17514.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
          Length = 246

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 10/206 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +    T      +     I+ +R  V + I   I   +G+  G        +    Q+
Sbjct: 26  AVLRAAVTLVQSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLDSALQM 85

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+                L+  GT + I  N   G  +      E+A 
Sbjct: 86  LRNVPHLALIPLVILWFGI----DEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMAR 141

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++ + G + +  ++LPG  P  + G   A G  W   IV+E  S       ++G+G    
Sbjct: 142 NYGLRGPQLFVDVLLPGALPSILVGLRFALGLMWLTLIVAETIS------ASSGIGYLAT 195

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + E      VV+ +L+        +
Sbjct: 196 NAREFLQTDIVVVAILLYALLGKLAD 221



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 15/225 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +    L Q+ + ++ R    + I     F    L   SR    +L 
Sbjct: 21  LPAPDAVLRAAVTLVQSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLD 80

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 81  SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGIRSV 132

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++R++ L G Q F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 133 DPALIEMARNYGLRGPQLFVDVLLPGALPSILVGLRFALGLMWLTLIVAETISASS---- 188

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             GIG     A +      ++ A+L    +  L D L  R +  W
Sbjct: 189 --GIGYLATNAREFLQTDIVVVAILLYALLGKLAD-LAARGLEAW 230


>gi|307152000|ref|YP_003887384.1| binding-protein-dependent transporter inner membrane component
           [Cyanothece sp. PCC 7822]
 gi|306982228|gb|ADN14109.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7822]
          Length = 273

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  RV +   + +I+ +P+GI +G    I + ++P   ++   PA  F PL++  +   
Sbjct: 82  ISFLRVSLGFFLGAIVAVPLGISMGAFASIRALVEPIMGVVRYMPAPAFIPLLMIYLGI- 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT ++    ++ G    P +  EVA +     ++  R +I+P + P
Sbjct: 141 ---DEPSKIALIFLGTVFFNTLMIMDGVKFIPKELIEVAYTLGGNRFQVVRQVIIPYVIP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +         AWN  +V+E+ +        TGLG  I  + +     E+   ++++  
Sbjct: 198 NIIDTFRINMAAAWNLVVVAELVA------AQTGLGKRILLAQKFLKTDEIFACLIVLGV 251

Query: 565 FVLALN 570
              A++
Sbjct: 252 IGFAID 257



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 91/232 (39%), Gaps = 15/232 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+            + +    + LR+     +  +              +  ++ 
Sbjct: 57  LPSPLDVCQAFIHLWQQGLILKDTWISFLRVSLGFFLGAIVAVPLGISMGAFASIRALVE 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ +++ +P   F+   ++Y     P K        I  IF   V+  T  +   +  I
Sbjct: 117 PIMGVVRYMPAPAFIPLLMIYLGIDEPSK--------IALIFLGTVFFNTLMIMDGVKFI 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L EV+ +   + +Q    + +P+ +P ++    ++M+  W  VV +E++        
Sbjct: 169 PKELIEVAYTLGGNRFQVVRQVIIPYVIPNIIDTFRINMAAAWNLVVVAELVAAQT---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
             G+G  I LA K      I   ++ +  + F  D L FR +   S K+ ++
Sbjct: 225 --GLGKRILLAQKFLKTDEIFACLIVLGVIGFAID-LSFRFLARLSCKWAVD 273


>gi|332885227|gb|EGK05478.1| hypothetical protein HMPREF9456_02679 [Dysgonomonas mossii DSM
           22836]
          Length = 293

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
                +    T + +L A +I L          A ++R   ++ P+LD MQ++P   +L 
Sbjct: 96  WMGFWEQTMDTFILVLVATLIVLTIGIPLGIWCAYNKRAYAIIRPLLDFMQTMPAFVYLI 155

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F     G V G     IF      +          + ++P+++ E S +F  +  
Sbjct: 156 PAILFFSV---GNVPGVLATVIF-----SLPPAVRMTALGIKSVPKEVVEASVAFGCTRR 207

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P +M  ++  +   +      VV + M+  G       G+G  +   I++ D
Sbjct: 208 QTLFKVQMPLAMTTILAGINQVIMLSLSMVVIASMVGAG-------GLGESVYAGIQQAD 260

Query: 238 LLAILYAMLTMLGVIFLYDQL 258
           +     A L ++ +  + D++
Sbjct: 261 VALGFEAGLCIVILAIILDRM 281



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 95/286 (33%), Gaps = 22/286 (7%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN------QRVSYMLDI 346
            F+ ++  ++  FF  ++  +      L  +  + P   +           ++ S   D 
Sbjct: 12  RFVDWLSDTAAPFFRQITIMIDNSVDVLQELLGYVPFYMIIAVVALIAFIIKKKSLGNDK 71

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W   +  +     +  +G ++ +      +        T   V+V  +I   I IP+GI
Sbjct: 72  AWQGNITTLIGFPLFCVLGLLLIY-----WMGFWEQTMDTFILVLVATLIVLTIGIPLGI 126

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W  +     + I+P    +   PA V+    +   S  ++   L   +     +    + 
Sbjct: 127 WCAYNKRAYAIIRPLLDFMQTMPAFVYLIPAILFFSVGNVPGVLATVIF----SLPPAVR 182

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G  + P +  E + +F  T  +    + +P      + G       + +  +++ +
Sbjct: 183 MTALGIKSVPKEVVEASVAFGCTRRQTLFKVQMPLAMTTILAGINQVIMLSLSMVVIASM 242

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              G       GLG  +    ++          L +    + L+R 
Sbjct: 243 VGAG-------GLGESVYAGIQQADVALGFEAGLCIVILAIILDRM 281


>gi|307131963|ref|YP_003883979.1| Urea carboxylase-related ABC transporter permease [Dickeya dadantii
           3937]
 gi|306529492|gb|ADM99422.1| Urea carboxylase-related ABC transporter, permease protein [Dickeya
           dadantii 3937]
          Length = 262

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 107/271 (39%), Gaps = 23/271 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVIWL 382
           H P        + R+ + L I +F +  G+   + +       ++ +  T      +++ 
Sbjct: 2   HNPLMVPLRAVSTRLRWTLGIGFFVLFIGMWSLVTFSGAVSATFLADPLTMLHEGVLLFT 61

Query: 383 -------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                    +T+ RVV   ++A++I +P+GI +G    + +  +PF       PA+ F P
Sbjct: 62  DYGFQQDIGMTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVP 121

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++       +       L++  G+ + I+  V     A   D  E A +   +      
Sbjct: 122 LLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVSVGAARRDLVEAAYTLGCSNRSVVT 177

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++PG  P          G AW   IV+E+         ++G+G  I +S    +  ++
Sbjct: 178 RVLIPGAAPDIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDSQALLNTGQI 231

Query: 556 VLGVLIMCCFVLALNRFLW---HPLYLYGTR 583
           + G++++    L  +         L+ +  R
Sbjct: 232 IFGIIVIGVIGLLSDFLFKAANRRLFAWSIR 262



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 90/252 (35%), Gaps = 18/252 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + F+ +  ++             P  ++    +    +   Q    T +R+++  +++ 
Sbjct: 25  FVLFIGMWSLVTFSGAVSATFLADPLTMLHEGVLLFTDYGFQQDIGMTVMRVVAGFLLAA 84

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L    + +     P +   + +P   F+   +++            E+  I 
Sbjct: 85  LIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKIL 136

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  S+    RDL E + +   S       + +P + P +   + + +
Sbjct: 137 VIFIGSFFQIVLMVAVSVGAARRDLVEAAYTLGCSNRSVVTRVLIPGAAPDIAELLRLVL 196

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  L D L  
Sbjct: 197 GWAWTYVIVAELIGASS------GIGHMIVDSQALLNTGQIIFGIIVIGVIGLLSDFLFK 250

Query: 261 ---RPMIVWSNK 269
              R +  WS +
Sbjct: 251 AANRRLFAWSIR 262


>gi|312883011|ref|ZP_07742742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369171|gb|EFP96692.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 299

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +   RT   +    ++S++         A+S R+  V+ P+LD+MQ++P   +L   
Sbjct: 98  GMWEDTMRTLSIITVCTLLSIILGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPV 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GK+ G     I+AI       +       +  + +++ E + +F  S  Q+
Sbjct: 158 VMLLG---IGKIPGLIAVVIYAIP-----PVIRLTNLGIRLVDKEVLEAATAFGASAKQR 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q   
Sbjct: 210 LIGVQLPLAMPTIMAGINQTIMMALSMVVIASMIGV-------KGLGQPVLKSITNQYFT 262

Query: 240 AILYAMLTMLGVIFLYDQ 257
             L     ++ +  L+D+
Sbjct: 263 LGLLNGFAIVALAILFDR 280



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 75/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I   C         +W+                +      T+  + V  +++ I
Sbjct: 60  STPWFIILAICTSLVYLASRSWKLSMGCFISLLLIGYFGMWEDTMRTLSIITVCTLLSII 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASAKQRLIGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 280


>gi|210623532|ref|ZP_03293877.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275]
 gi|210153590|gb|EEA84596.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275]
          Length = 208

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 4/143 (2%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I    ITM RV+     A +I +P+G  +GF       + P    +   P   + PL + 
Sbjct: 70  IKNVFITMQRVMKGFGYALVIGLPIGFIMGFSNTCEKVLSPVIDSVRQVPIMSWVPLTIV 129

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          L+ F   + I+ N I G      D+   A S   + +  ++ +I 
Sbjct: 130 WFGIGDG----PTIFLIAFSGIFSIVLNTIHGVRTISKDYYNAAKSMGASPFIIFKDVIF 185

Query: 500 PGIFPYYVTGAITACGGAWNASI 522
           P   P  +TGA  A    W + I
Sbjct: 186 PAALPDILTGARLAISNGWMSVI 208



 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 74/187 (39%), Gaps = 8/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L+       L       +P  +++     L      +    T  R++     +L+
Sbjct: 30  LVGIYLLWHFTAKDLGSDLLLPMPSKVIEGFLYCLTDPETIKNVFITMQRVMKGFGYALV 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S     VL P++D ++ +PI+ ++  T+V+F               IF 
Sbjct: 90  IGLPIGFIMGFSNTCEKVLSPVIDSVRQVPIMSWVPLTIVWFGIGDGP--------TIFL 141

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S ++++  +    +  I +D    ++S   S +  F  +  P ++P ++    +++S
Sbjct: 142 IAFSGIFSIVLNTIHGVRTISKDYYNAAKSMGASPFIIFKDVIFPAALPDILTGARLAIS 201

Query: 202 GGWFFVV 208
            GW  V+
Sbjct: 202 NGWMSVI 208


>gi|158522774|ref|YP_001530644.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
 gi|158511600|gb|ABW68567.1| binding-protein-dependent transport systems inner membrane
           component [Desulfococcus oleovorans Hxd3]
          Length = 278

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 15/202 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   ++ A++ ++        L+A S+    ++ PILD+MQ++P   +L   
Sbjct: 83  ELWAPTVSTMALIVIAVLFAIAIGVPLGILSALSQTAYRIITPILDVMQTMPAFVYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F     G        AIF+     V          +  +PR+L E + +F  S  QK
Sbjct: 143 IPFFGLGAVG--------AIFSTVIFSVPPCIRLTCLGIKQVPRELVEAADAFGSSRGQK 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +   ++  +  ++      VV + MI          G+G  +  AI+  +  
Sbjct: 195 LFKVQLPIAKTTMMAGINQTIMLALSMVVIAAMI-------GAKGLGGEVWKAIQRLEPG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
               A + ++ +  + D+++ R
Sbjct: 248 RGFEAGIGIVILAIILDRVMQR 269



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 17/232 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIP 403
            V+     G+AW               L +IW   +      TM  +V+ ++ A  I +P
Sbjct: 49  LVLILALTGLAWFLSRRRGIALFTLVGLLLIWNMELWAPTVSTMALIVIAVLFAIAIGVP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI           I P   ++   PA V+    +       +       +     +   
Sbjct: 109 LGILSALSQTAYRIITPILDVMQTMPAFVYLIPAIPFFGLGAVGAIFSTVIF----SVPP 164

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            +     G    P +  E A +F  +  +    + LP      + G       A +  ++
Sbjct: 165 CIRLTCLGIKQVPRELVEAADAFGSSRGQKLFKVQLPIAKTTMMAGINQTIMLALSMVVI 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +           GLG  + ++ ++          + +    + L+R +  
Sbjct: 225 AAMIG-------AKGLGGEVWKAIQRLEPGRGFEAGIGIVILAIILDRVMQR 269


>gi|329928981|ref|ZP_08282791.1| glycine betaine transport system permease protein opuAB
           [Paenibacillus sp. HGF5]
 gi|328937233|gb|EGG33660.1| glycine betaine transport system permease protein opuAB
           [Paenibacillus sp. HGF5]
          Length = 277

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 21/236 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLF 82
            F++++ +I  LL  +     P  +   +   L D          T   +++A +IS++ 
Sbjct: 50  LFIVILAVIAYLLGRL-----PLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVIL 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA S+    V++P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 105 GVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +  +L E + +F  +  QK + + +P +MP L+  +  ++  
Sbjct: 162 P-----PTIRLTRLGINQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIML 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          GIG+ +  A+ +  +     A L ++ +  + D+ 
Sbjct: 217 SLSMVVIASMI-------GAQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 13/228 (5%)

Query: 347 FWFCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           + F V+  V   +        +    F   D L        T+  V+   +I+ I+ +P+
Sbjct: 49  YLFIVILAVIAYLLGRLPLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVILGVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW  +    S  I P    +   PA V+    V+  S   +   +   +  I       
Sbjct: 109 GIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAI----PPT 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G +    +  E A +F  T  +    + LP   P  + G       + +  +++
Sbjct: 165 IRLTRLGINQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIMLSLSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           G+GA +  +  +    +     L +    + L+RF
Sbjct: 225 SMIG-------AQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265


>gi|330939585|gb|EGH42900.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 285

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 86/232 (37%), Gaps = 14/232 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++    I    Q  G + +     ++ + +W   +++ R +  + I   I +   +  G
Sbjct: 58  GLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW---VSLQRALSGLSIGVSIGVVAALVTG 114

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +    Q+L   P+    PL +                L++ GT + +  N+ 
Sbjct: 115 LSRRGEIVLDSPMQMLRTIPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLF 170

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +G         E A++  ++      ++ILPG  P +  G   + G +W A +  E  + 
Sbjct: 171 SGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQIN- 229

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
                 T G+G   +++ +      +V+ +LI     L ++  +   L  Y 
Sbjct: 230 -----TTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAII-RTLERYA 275



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R LS + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALSGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTF 282


>gi|119943842|ref|YP_941522.1| ABC taurine transporter, binding protein inner membrane component
           [Psychromonas ingrahamii 37]
 gi|119862446|gb|ABM01923.1| ABC taurine transporter, binding protein inner membrane component
           [Psychromonas ingrahamii 37]
          Length = 330

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+    I+A +I IP+GI IG          P  +     P   + PL++  +   
Sbjct: 138 ASLVRIFGAFILACLIGIPLGITIGCNRVFRGIFDPLIEFYRPLPPLAYLPLIIIWLGI- 196

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+       I+ +  AG ++   +  +VA S   + W+    +I  G  P
Sbjct: 197 ---DESSKVTLIFLAMLAPIVLSARAGVTSVRIEQIQVAYSMGASPWQVVTQVIARGAMP 253

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W   + +E+ +         G+G  +  ++E      V+ G+L++  
Sbjct: 254 DIMTGMRIAIGFGWTTLVAAEMVA------AEQGIGFMVLNASEFLVTDVVIAGILVIGI 307

Query: 565 FVLALNRFL 573
                +  +
Sbjct: 308 IAYCFDLLM 316



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 103/263 (39%), Gaps = 20/263 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDI----VDIVPITLDVHSLP 62
            P +      ++   + F+ +  I              P D+    +DI        +L 
Sbjct: 74  TPGVGDSRLISVCSTIFFIAIWAIATEGGFIKPIFLPSPFDVVERLIDITVDGFAGATLL 133

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ + + +R+  A +++ L           +R    +  P+++  + +P L +L   +++
Sbjct: 134 EHLNASLVRIFGAFILACLIGIPLGITIGCNRVFRGIFDPLIEFYRPLPPLAYLPLIIIW 193

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       E + +  IF + +  +  S    + ++  +  +V+ S   S WQ    
Sbjct: 194 LGID--------ESSKVTLIFLAMLAPIVLSARAGVTSVRIEQIQVAYSMGASPWQVVTQ 245

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +    +MP ++  M +++  GW  +VA+EM+          GIG  +  A +      ++
Sbjct: 246 VIARGAMPDIMTGMRIAIGFGWTTLVAAEMVA------AEQGIGFMVLNASEFLVTDVVI 299

Query: 243 YAMLTMLGVIFLYDQLLFRPMIV 265
             +L +  + + +D LL R +  
Sbjct: 300 AGILVIGIIAYCFD-LLMRYLEA 321


>gi|304392892|ref|ZP_07374823.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
 gi|303294890|gb|EFL89259.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
          Length = 523

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +V+    ILL  +     P        + + +    + A  T   + +A  +S+L     
Sbjct: 301 IVVASFIILLTWLSAGVRPALWSGAFLLYMGLLGFWEKAMTTLALLGTAACLSILIGIPL 360

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A+  RL  V+ PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 361 GMLCARRHRLYAVIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 412

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  S W     + +P + P +   +  ++      
Sbjct: 413 GTPVVRLTVLGLRGVPEAVREAAISFGASKWYLLTRVDLPLAAPSIRAGINQTIMLSLAM 472

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 473 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 518



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 81/230 (35%), Gaps = 11/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    ++    +    +   +      Y  +L        T+  +     ++ +I IP
Sbjct: 300 WIVVASFIILLTWLSAGVRPALWSGAFLLYMGLLGFWEKAMTTLALLGTAACLSILIGIP 359

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+    R  + + IQP    +   PA VF    +  ++++       +   MIFG    
Sbjct: 360 LGMLCARRHRLYAVIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFGGT-P 415

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   + G    P   +E A SF  + W     + LP   P    G       +    +V
Sbjct: 416 VVRLTVLGLRGVPEAVREAAISFGASKWYLLTRVDLPLAAPSIRAGINQTIMLSLAMVVV 475

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 476 ASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 518


>gi|254455337|ref|ZP_05068766.1| ABC transporter, membrane spanning protein (glycine betaine)
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082339|gb|EDZ59765.1| ABC transporter, membrane spanning protein (glycine betaine)
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 295

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +VIG+  IL                  I +    + +    T   +  + ++ ++    
Sbjct: 61  PIVIGVFGILAWIGSRNYKLVIGTIACFIVIGYFGMWKNCMATVAIISVSTLVCIVVGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L +KS R    ++P+LD+MQ+IP   +L   ++       GKV G     I+A    
Sbjct: 121 IGILMSKSSRAERTILPVLDMMQTIPSFVYLIPIIMLLG---IGKVPGLLAVCIYA---- 173

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + ++  E + +F  +  QK   + +P S+P +   +  ++     
Sbjct: 174 -LPPVVRLTNLGIREVDKETLEAAEAFGATPMQKLRSVQIPLSLPTIFAGINQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  I  AI  Q L   L   L ++ +  ++D++
Sbjct: 233 MVVIASMIGV-------RGLGVPILQAISNQYLALGLMNGLAIVALAIIFDRV 278



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 73/226 (32%), Gaps = 14/226 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVG 405
              V G+   I  ++   ++       V+    +      T+  + V  ++  ++ IP+G
Sbjct: 63  VIGVFGILAWIGSRNYKLVIGTIACFIVIGYFGMWKNCMATVAIISVSTLVCIVVGIPIG 122

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +         I P   ++   P+ V+   ++  +        +   L +       ++
Sbjct: 123 ILMSKSSRAERTILPVLDMMQTIPSFVYLIPIIMLLGIG----KVPGLLAVCIYALPPVV 178

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E A +F  T  +  R + +P   P    G       A    +++ 
Sbjct: 179 RLTNLGIREVDKETLEAAEAFGATPMQKLRSVQIPLSLPTIFAGINQTIMMALAMVVIAS 238

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +           GLG  I ++         ++  L +    +  +R
Sbjct: 239 MIG-------VRGLGVPILQAISNQYLALGLMNGLAIVALAIIFDR 277


>gi|302391226|ref|YP_003827046.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
 gi|302203303|gb|ADL11981.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 275

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     RT + +  A VI+L        L  KS+ L  ++ PILD MQ++P   +L   
Sbjct: 81  GLWVATIRTFVLVFVAAVIALALGIPTGILINKSQLLNRIITPILDFMQTMPPFVYLIPA 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            ++F     G V G     IFA+  +            L  +P +LEEV  +F  + WQ 
Sbjct: 141 TMFFG---IGNVPGVMATVIFAMPPA-----IRLTDLGLKQVPDELEEVGFAFGSTPWQM 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +   +      VV + MI          G+G+ +   I+   + 
Sbjct: 193 LFKVRLPLALPSIMAGINQCIMLSLSMVVIASMI-------GAKGLGAEVLNGIQRMQIG 245

Query: 240 AILYAMLTMLGVIFLYDQL 258
               A L ++ +  + D++
Sbjct: 246 VGFEAGLGVVILAIILDRI 264



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-----TMFRVVVLIIIA 397
           +L +    VV     G+A       V  F++  +  V  +G       T   V V  +IA
Sbjct: 41  LLLVAPPLVVILALTGLALLIADKKVAFFSFIGLFVVFGMGLWVATIRTFVLVFVAAVIA 100

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + IP GI I     ++  I P    +   P  V+           ++   +   +   
Sbjct: 101 LALGIPTGILINKSQLLNRIITPILDFMQTMPPFVYLIPATMFFGIGNVPGVMATVIF-- 158

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +     G    P++ +EV  +F  T W+    + LP   P  + G       +
Sbjct: 159 --AMPPAIRLTDLGLKQVPDELEEVGFAFGSTPWQMLFKVRLPLALPSIMAGINQCIMLS 216

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLGA +    ++          L +    + L+R 
Sbjct: 217 LSMVVIASMIG-------AKGLGAEVLNGIQRMQIGVGFEAGLGVVILAIILDRI 264


>gi|251799062|ref|YP_003013793.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546688|gb|ACT03707.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 259

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+ +RV     + S++ IP+G+ IG    I    +PF   +   P   F  L
Sbjct: 51  GSLMKYIGISFYRVFAGWALGSLLAIPIGLTIGKVTAIRVFAEPFLNFVRFIPPIAFITL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +       L+++ T + ++ N + G  A   D    A S   + W+   +
Sbjct: 111 FLVWFGIGEQSK----IALIMYATLFIVIINTLTGVLAIEEDRIRSARSMGASEWQILLH 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   PY  TG   A G ++ A I +E+ +         G+G  I  S        + 
Sbjct: 167 VVIPATTPYIFTGIRLAMGTSYMAIIGAEMIA------ANEGVGFLIWNSRLYFRTDWIF 220

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++ +       +R +
Sbjct: 221 VGLISLGLMGFLTDRIV 237



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 14/246 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R +  I  L     ++  I   ++G +    P          L   SL +Y   +  R+ 
Sbjct: 6   RKWVTIPLLWVITFIVWQIGAWIYGPEIIPGPAATWQGAQELLSDGSLMKYIGISFYRVF 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   +  L          K   + +   P L+ ++ IP + F+T  +V+F          
Sbjct: 66  AGWALGSLLAIPIGLTIGKVTAIRVFAEPFLNFVRFIPPIAFITLFLVWFGIG------- 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + I  I  + ++ +  +    +  I  D    +RS   S WQ   ++ +P + P + 
Sbjct: 119 -EQSKIALIMYATLFIVIINTLTGVLAIEEDRIRSARSMGASEWQILLHVVIPATTPYIF 177

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++M   +  ++ +EMI   +      G+G  I  +        I   ++++  + F
Sbjct: 178 TGIRLAMGTSYMAIIGAEMIAANE------GVGFLIWNSRLYFRTDWIFVGLISLGLMGF 231

Query: 254 LYDQLL 259
           L D+++
Sbjct: 232 LTDRIV 237


>gi|227818731|ref|YP_002822702.1| ABC-type proline/glycine betaine transport system, permease
           component [Sinorhizobium fredii NGR234]
 gi|36958984|gb|AAQ87409.1| Glycine betaine transport system permease protein [Sinorhizobium
           fredii NGR234]
 gi|227337730|gb|ACP21949.1| predicted ABC-type proline/glycine betaine transport system,
           permease component [Sinorhizobium fredii NGR234]
          Length = 295

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     +T   +    V+S++       + ++S R+   L PILD+MQ++P   +L   V
Sbjct: 96  MWDDTMKTVSMIFVCTVLSIVIGIPIGIVMSRSDRVQNALNPILDVMQTMPSFVYLIPVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +       GKV G     I+AI       M       +  + +D+ E + +F  S WQK 
Sbjct: 156 MLLG---IGKVPGLIAVIIYAIP-----PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKL 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L+  +  ++      VV + MI V        G+G  +  AI  Q    
Sbjct: 208 KNVQMPLALPTLMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260

Query: 241 ILYAMLTMLGVIFLYDQL 258
            ++  L ++G+  ++D++
Sbjct: 261 GIFNGLAIVGIAIIFDRV 278



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 88/280 (31%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N  + I      F     ++++ +   L            +      +  +  I W   
Sbjct: 16  RNLKKAIDEGFRAFTRAYGDSIESIFEPLQHFLIWSERFMTRTPWPIILLLIGLIAWLA- 74

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                    W+ +   V          +      T+  + V  +++ +I IP+GI +   
Sbjct: 75  ------SRNWKIVTGAVGTLLLIGYFDMWDDTMKTVSMIFVCTVLSIVIGIPIGIVMSRS 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + + P   ++   P+ V+   VV  +        +   + +I      ++     G
Sbjct: 129 DRVQNALNPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVIIYAIPPMIRLTNLG 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +F  + W+  + + +P   P  + G       A    +++ +     
Sbjct: 185 IRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTLMAGINQTIMMALAMVVIASMIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F   +   L +    +  +R
Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277


>gi|325686152|gb|EGD28203.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 506

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 15/209 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I  I+     + Q      L  + A+++S L       L A S+R G V+  I  I+Q+I
Sbjct: 5   INTISSHQGQIWQALGEHLLLSMEALLLSCLIAIPLGMLLAHSKRAGEVVFQITSIIQTI 64

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   + +               A+ A+    +  +  + Y +L NI  +LEE + 
Sbjct: 65  PSLALLGLLIPFVGIG--------TTPALIALTAYGIMPIYQNTYSALRNIDPNLEEAAD 116

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +F LS W+K   L  P ++P ++  + +S+         + MI  G       G+G+YI 
Sbjct: 117 AFGLSRWKKLSRLEFPIALPIILSGVSISLVMIIGTATLAAMIGAG-------GLGTYII 169

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + I++ +   IL        +      LL
Sbjct: 170 IGIQQNNNTYILIGAGLSAVLTLAMSGLL 198



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I IP+G+ +         +     ++   P+     L++  V        + L+   
Sbjct: 33  SCLIAIPLGMLLAHSKRAGEVVFQITSIIQTIPSLALLGLLIPFVGIGTTPALIALTAYG 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      I  N  +       + +E A +F ++ W+    +  P   P  ++G   +   
Sbjct: 93  IM----PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISLVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
               + ++ +   G       GLG YI    ++ +   +++G  +     LA++  L   
Sbjct: 149 IIGTATLAAMIGAG-------GLGTYIIIGIQQNNNTYILIGAGLSAVLTLAMSGLL--K 199

Query: 577 LYLYGTRCLRL 587
                 +  R+
Sbjct: 200 FMASSKKHFRV 210


>gi|46204882|ref|ZP_00049349.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 223

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 12/182 (6%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406
            A+ + W +    +  +      ++ WL           +++RVVV  ++ + + +P+G+
Sbjct: 41  AAVAVRWWAYLAPLEAYDPAQGSWLAWLFSGEMLHDALASLYRVVVGFVVGAGLALPLGL 100

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           ++G    I   + P  Q+L   P   + PL +          N     L+  G  + +L 
Sbjct: 101 FMGSSDVIYRHVNPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N IAG       +   A S   +    +R +ILP   PY ++GA    G A+   IV+E+
Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216

Query: 527 AS 528
            +
Sbjct: 217 IA 218



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 67/193 (34%), Gaps = 12/193 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81
            +V+     +         P +  D    +    L    +   A  +  R++   V+   
Sbjct: 34  PMVLPSPAAVAVRWWAYLAPLEAYDPAQGSWLAWLFSGEMLHDALASLYRVVVGFVVGAG 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +   + P++ +++ IP + ++  ++++F              A+F 
Sbjct: 94  LALPLGLFMGSSDVIYRHVNPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + ++       +RS   S    F  + +P + P ++    + + 
Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 205

Query: 202 GGWFFVVASEMIV 214
             +  V+ +EMI 
Sbjct: 206 TAFIVVIVAEMIA 218


>gi|311696188|gb|ADP99061.1| binding-protein-dependent transport systems inner membrane
           component [marine bacterium HP15]
          Length = 344

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 94/237 (39%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +   L++ ++ ++    +        V    + L       YA +T   +     + +L
Sbjct: 112 WIVIPLLLAVVYVVTKSWKLML----FVGGSIVLLAFIDHYDYAMQTLAIIFVCAFLCVL 167

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A+S  L  +++P+LD++Q++P   +L   +  F                 A
Sbjct: 168 LGVPIGIAMARSNSLQRMIIPVLDMLQTLPPFVYLIPLIFLFSVTESKLYG-------IA 220

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  +       +  + +D+ E + +F ++  QK + + +P ++P ++  +  ++ 
Sbjct: 221 IILYAIVPVIRLTNLGIRLVDKDVIEAADAFGMTPRQKLYKVQIPLALPNIMAGVNQTIM 280

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + ++         PG+G  +   I+  +L   L + L ++ +  + D++
Sbjct: 281 MSLAMVVIASLVS-------APGLGVLVLRGIRNLELGVGLVSGLGIVILAVILDRV 330



 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 75/231 (32%), Gaps = 10/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    +    +     +  +W+ + ++         +        T+  + V   +  ++
Sbjct: 109 TPWWIVIPLLLAVVYVVTKSWKLMLFVGGSIVLLAFIDHYDYAMQTLAIIFVCAFLCVLL 168

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     +   I P   +L   P  V+    +  +  + +  +    + +I   
Sbjct: 169 GVPIGIAMARSNSLQRMIIPVLDMLQTLPPFVYL---IPLIFLFSVTESKLYGIAIILYA 225

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      D  E A +F +T  +    + +P   P  + G       +   
Sbjct: 226 IVPVIRLTNLGIRLVDKDVIEAADAFGMTPRQKLYKVQIPLALPNIMAGVNQTIMMSLAM 285

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ + S         GLG  +            ++  L +    + L+R
Sbjct: 286 VVIASLVS-------APGLGVLVLRGIRNLELGVGLVSGLGIVILAVILDR 329


>gi|116872417|ref|YP_849198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741295|emb|CAK20417.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 282

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+G   +   G +   +  ++V ++ I        +  ++T   +L++ +I+L+
Sbjct: 52  LFIILLVLGTFWVNRKGKKWGLITFEVVGLLLIW--NLDFWRDMTQTLTLVLTSSLIALV 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  +  P+LD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 110 IGVPLGIWMAKSSIVESIFKPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +  +L E + SF  + WQK W + +P +   ++  +  S+ 
Sbjct: 167 MP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A + ++ V  + D+L
Sbjct: 222 LALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVLGTFWVNRKGKKWGLITFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSSIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|66046827|ref|YP_236668.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63257534|gb|AAY38630.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 285

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 86/232 (37%), Gaps = 14/232 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++    I    Q  G + +     ++ + +W   +++ R ++ + I   I +   +  G
Sbjct: 58  GLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW---VSLQRALLGLSIGVSIGVVAALVTG 114

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +    Q L   P+    PL +                L++ GT + +  N+ 
Sbjct: 115 LSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLF 170

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +G         E A++  ++      ++ILPG  P +  G   + G +W A +  E  + 
Sbjct: 171 SGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQIN- 229

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
                 T G+G   +++ +      +V+ +LI     L ++  +   L  Y 
Sbjct: 230 -----TTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAII-RTLERYA 275



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  +++IP L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQRLRTIPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E + +  LS  +  W++ +P S+P     +  S+   W  +V  E I         
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            GIG   + A        I+  +L    +  + D   + L R  + W   F
Sbjct: 232 AGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTF 282


>gi|264680713|ref|YP_003280623.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni
           CNB-2]
 gi|262211229|gb|ACY35327.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni CNB-2]
          Length = 277

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 13/275 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +++  ++  + + ++            S   + +     +      V           + 
Sbjct: 5   VASPSRRPAKPVSLLSSRQLGLRWLERSACVLLFFAIWEFLPRAGLVNSAFLSPPSAVLA 64

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +      ++ R +  +I+A +  + +G+ +G      + + P  QL    
Sbjct: 65  AIVQLAQTGQLGKHVAASLQRSLAGLILAVVAGVALGLLMGVVRRFEAFVDPLLQLFRQV 124

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            A   FP+ +        +       ++ +   W +L N I+G           A S   
Sbjct: 125 SALALFPVFLLFFGIGEASK----IAIIFWAAFWPVLLNTISGVKQVEKLLIHSALSMGA 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +    +  +ILP   P   TG   A   +  A + +E+           GLG     S E
Sbjct: 181 SRGFIFFKVILPAAAPSIFTGIRLAGAYSITALVAAEMIGSH------AGLGFLTLNSQE 234

Query: 549 KGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLY 580
               P +  G++++    LALN     L   L  +
Sbjct: 235 IFQIPSMYAGIVLLAVLGLALNYGLALLEKRLTRW 269



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 88/234 (37%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L      + P  ++  +        L ++ + +  R L+ ++++++       L    RR
Sbjct: 50  LVNSAFLSPPSAVLAAIVQLAQTGQLGKHVAASLQRSLAGLILAVVAGVALGLLMGVVRR 109

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               + P+L + + +  L      +++F           E + I  IF +  W +  +  
Sbjct: 110 FEAFVDPLLQLFRQVSALALFPVFLLFFGIG--------EASKIAIIFWAAFWPVLLNTI 161

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  + + L   + S   S    F+ + +P + P +   + ++ +     +VA+EMI  
Sbjct: 162 SGVKQVEKLLIHSALSMGASRGFIFFKVILPAAAPSIFTGIRLAGAYSITALVAAEMIG- 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
                   G+G     + +   + ++   ++ +  +    +    LL + +  W
Sbjct: 221 -----SHAGLGFLTLNSQEIFQIPSMYAGIVLLAVLGLALNYGLALLEKRLTRW 269


>gi|171912998|ref|ZP_02928468.1| binding-protein-dependent transport systems inner membrane
           component [Verrucomicrobium spinosum DSM 4136]
          Length = 374

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +++S++ +P+GI  G     S   +PF +     PA  F  L V+ +  + 
Sbjct: 135 SIKVIASGFLLSSLVGVPLGILCGSFRFFSRLHEPFIEFFRYLPAPAFGALCVAMLGIHD 194

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  GT +  +  +            E A +   +  +    +I+P   P 
Sbjct: 195 APK----VAIIFIGTFFQQVLVIANTVRKVDPGLIEAAQTLGASRRKLVTRVIIPSSIPE 250

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T      G AW   IV+E+         T+GL  +I +     +F  V   + ++   
Sbjct: 251 IFTDMRILLGWAWTYLIVAEIIG------ATSGLTWFINQQARYRNFDNVYAAICLIGFI 304

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 305 GLGTDILL 312



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 83/263 (31%), Gaps = 33/263 (12%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    +   + S  ++S L       L    R    +  P ++  + +P   F    V
Sbjct: 128 LHQSLWHSIKVIASGFLLSSLVGVPLGILCGSFRFFSRLHEPFIEFFRYLPAPAFGALCV 187

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                         +   +  IF    +     +  ++  +   L E +++   S  +  
Sbjct: 188 AMLGI--------HDAPKVAIIFIGTFFQQVLVIANTVRKVDPGLIEAAQTLGASRRKLV 239

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+P +  +M + +   W +++ +E+I          G+  +I    + ++   
Sbjct: 240 TRVIIPSSIPEIFTDMRILLGWAWTYLIVAEIIG------ATSGLTWFINQQARYRNFDN 293

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           +  A+  +  +    D LL +                     + +    R+     F+G 
Sbjct: 294 VYAAICLIGFIGLGTDILLAK-------------------LGTMIFPWRRRNRGPSFLGS 334

Query: 301 SSWNFFSPLSNNVKKLCRTLGVI 323
                  PL  ++     T    
Sbjct: 335 LISRLIKPLKKSIHTAGSTASAP 357


>gi|23500476|ref|NP_699916.1| glycine betaine/L-proline ABC transporter permease [Brucella suis
           1330]
 gi|161620798|ref|YP_001594684.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|163844870|ref|YP_001622525.1| hypothetical protein BSUIS_B0731 [Brucella suis ATCC 23445]
 gi|225629216|ref|ZP_03787249.1| glycine betaine/L-proline ABC transporter permease protein
           [Brucella ceti str. Cudo]
 gi|254695772|ref|ZP_05157600.1| hypothetical protein Babob3T_14290 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254699956|ref|ZP_05161784.1| hypothetical protein Bsuib55_03722 [Brucella suis bv. 5 str. 513]
 gi|254703078|ref|ZP_05164906.1| hypothetical protein Bsuib36_03902 [Brucella suis bv. 3 str. 686]
 gi|254705779|ref|ZP_05167607.1| hypothetical protein BpinM_01910 [Brucella pinnipedialis
           M163/99/10]
 gi|254711010|ref|ZP_05172821.1| hypothetical protein BpinB_12262 [Brucella pinnipedialis B2/94]
 gi|254720289|ref|ZP_05182100.1| hypothetical protein Bru83_12325 [Brucella sp. 83/13]
 gi|256015503|ref|YP_003105512.1| glycine betaine/L-proline ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256029392|ref|ZP_05443006.1| hypothetical protein BpinM2_01820 [Brucella pinnipedialis
           M292/94/1]
 gi|256059081|ref|ZP_05449290.1| hypothetical protein Bneo5_01810 [Brucella neotomae 5K33]
 gi|256157585|ref|ZP_05455503.1| hypothetical protein BcetM4_01850 [Brucella ceti M490/95/1]
 gi|256253440|ref|ZP_05458976.1| hypothetical protein BcetB_03907 [Brucella ceti B1/94]
 gi|260167519|ref|ZP_05754330.1| glycine betaine/L-proline ABC transporter, permease protein
           [Brucella sp. F5/99]
 gi|260567993|ref|ZP_05838462.1| prion protein [Brucella suis bv. 4 str. 40]
 gi|261216184|ref|ZP_05930465.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|261220564|ref|ZP_05934845.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261313201|ref|ZP_05952398.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261318594|ref|ZP_05957791.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261323028|ref|ZP_05962225.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261750435|ref|ZP_05994144.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261753693|ref|ZP_05997402.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|261756935|ref|ZP_06000644.1| prion protein [Brucella sp. F5/99]
 gi|265985307|ref|ZP_06098042.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|265986395|ref|ZP_06098952.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265996089|ref|ZP_06108646.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|306839824|ref|ZP_07472623.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
 gi|23464104|gb|AAN33921.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella suis 1330]
 gi|161337609|gb|ABX63913.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|163675593|gb|ABY39703.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225615712|gb|EEH12761.1| glycine betaine/L-proline ABC transporter permease protein
           [Brucella ceti str. Cudo]
 gi|255998163|gb|ACU49850.1| glycine betaine/L-proline ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260154658|gb|EEW89739.1| prion protein [Brucella suis bv. 4 str. 40]
 gi|260917791|gb|EEX84652.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260919148|gb|EEX85801.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261297817|gb|EEY01314.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261299008|gb|EEY02505.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261302227|gb|EEY05724.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261736919|gb|EEY24915.1| prion protein [Brucella sp. F5/99]
 gi|261740188|gb|EEY28114.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261743446|gb|EEY31372.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|262550386|gb|EEZ06547.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|264658592|gb|EEZ28853.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|264663899|gb|EEZ34160.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306405100|gb|EFM61380.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
          Length = 301

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|89053990|ref|YP_509441.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863539|gb|ABD54416.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 327

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D   F+++     +     +   VP  +       ++     +  + +   +LSA V+ +
Sbjct: 101 DWHPFLVIAIFTALAWWMHRGWKVPMLVAVGFLFIVNQDY-WEETTESLTLVLSACVVCM 159

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                     A   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF
Sbjct: 160 GVGVPIGIAVAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIF 216

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +            +  + + P+ L E + +F  +G QK W + +P+++P ++  +  ++
Sbjct: 217 VLPAP-----IRLTHLGISSTPQSLLEAADAFGATGSQKLWKVELPYALPQIMTGLNQTI 271

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 VV + ++          G+G  +  A+ + +      +   ++ V  + D+ L
Sbjct: 272 MLSLSMVVIAALV-------GADGLGVPVVRALNQVNTGLGFESGFIIVVVAIVLDRTL 323



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 19/288 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML---DIFWFC 350
              ++  +    F  ++  ++ +      I    P          R +  L   D   F 
Sbjct: 47  VFDWLQSNGAFIFDAMAVALEAMIEVFLAILQEPPNTSWFQDIRLRDAAFLYPQDWHPFL 106

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIASIIWIPVG 405
           V+        W   G+ V        L+++          ++  V+   ++   + +P+G
Sbjct: 107 VIAIFTALAWWMHRGWKVPMLVAVGFLFIVNQDYWEETTESLTLVLSACVVCMGVGVPIG 166

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +  RP + + ++P   L+   P  V+    +       +   +   + ++      I 
Sbjct: 167 IAVAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIR 223

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G S+ P    E A +F  TG +    + LP   P  +TG       + +  +++ 
Sbjct: 224 L-THLGISSTPQSLLEAADAFGATGSQKLWKVELPYALPQIMTGLNQTIMLSLSMVVIAA 282

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +           GLG  +  +  + +         I+    + L+R L
Sbjct: 283 LVG-------ADGLGVPVVRALNQVNTGLGFESGFIIVVVAIVLDRTL 323


>gi|308172872|ref|YP_003919577.1| aliphatic sulfonate ABC transporter permease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605736|emb|CBI42107.1| aliphatic sulfonate ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552511|gb|AEB23003.1| aliphatic sulfonate ABC transporter (permease) [Bacillus
           amyloliquefaciens TA208]
 gi|328910910|gb|AEB62506.1| aliphatic sulfonate ABC transporter (permease) [Bacillus
           amyloliquefaciens LL3]
          Length = 277

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 99/253 (39%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            A + V   I  L +        P  I+      L    L  +   +  R  +  ++   
Sbjct: 38  AAVIAVWQFIASLGIVSATVLPSPVIILQTFQELLLSGELWGHLEISLYRAAAGFLLGAG 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V+  L   S+R    L P L +++++P L      +++F      K++   L A F 
Sbjct: 98  LGLVFGLLVGFSKRTEAYLDPSLQMLRTVPHLAVTPLFILWFGFDETSKILLIALGAFFP 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L +V+R    + +Q+   L +P S+P ++  + +S+ 
Sbjct: 158 VY--------INTFLGIRGVDAKLFDVARVLEFNWYQQMTKLILPASLPNILLGIRLSLG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++   +      G+G  I  A +      +   ++    V  L D   ++
Sbjct: 210 IAWLGLVVAELMGSSE------GVGYMIMDARQFSQTNKVFVGIIIFAAVGKLTDALVRM 263

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N + 
Sbjct: 264 LERKLLKWRNSYE 276



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 13/249 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---YVIWLGC 384
           P  +        V     I  +  +  + I  A      ++   T+Q++L    +     
Sbjct: 23  PRRYSYQWMKGVVLPAAVIAVWQFIASLGIVSATVLPSPVIILQTFQELLLSGELWGHLE 82

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R     ++ + + +  G+ +GF     + + P  Q+L   P     PL +    + 
Sbjct: 83  ISLYRAAAGFLLGAGLGLVFGLLVGFSKRTEAYLDPSLQMLRTVPHLAVTPLFILWFGFD 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+  G  + +  N   G         +VA       ++    +ILP   P
Sbjct: 143 ETSK----ILLIALGAFFPVYINTFLGIRGVDAKLFDVARVLEFNWYQQMTKLILPASLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G AW   +V+E+         + G+G  I ++ +     +V +G++I   
Sbjct: 199 NILLGIRLSLGIAWLGLVVAELMG------SSEGVGYMIMDARQFSQTNKVFVGIIIFAA 252

Query: 565 FVLALNRFL 573
                +  +
Sbjct: 253 VGKLTDALV 261


>gi|254422997|ref|ZP_05036715.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196190486|gb|EDX85450.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 284

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 12/185 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++   IAS +   VG+ IG+   I   + P  +LL   PA  + PL +       
Sbjct: 88  SIVRVLLGFAIASALGTVVGMLIGWFQVIEDLLMPPLELLRPIPAVAWIPLAILIFPTAE 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAF--PNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +  +   G  + +L + I              V      + W  ++ I++PG  
Sbjct: 148 TG----MIYITFVGAFFPVLISTIRAVENILHDVVLIRVGQCLGASRWHIFKDIVIPGSL 203

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   +G     G AW   + +E+ +  +      G+G    ES    ++P +V+G+L++ 
Sbjct: 204 PGIASGLTIGMGNAWFCLVTAEILAGRY------GVGYITWESYVTSNYPPIVMGMLLIG 257

Query: 564 CFVLA 568
                
Sbjct: 258 LMGAL 262



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 102/270 (37%), Gaps = 21/270 (7%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLH----GIQETTVPRDIVDIVPITLD 57
              ++     + R F  +  L+ F  +   + ++        Q    P +++    I   
Sbjct: 19  RYQSLQTTLRANRSFMRLLSLMLFFGIWQFLCVVGFKFFINFQLVPSPWEVLGAT-IEFF 77

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
                 +   + +R+L    I+     V   L    + +  +L+P L++++ IP + ++ 
Sbjct: 78  SSEPGVHLRSSIVRVLLGFAIASALGTVVGMLIGWFQVIEDLLMPPLELLRPIPAVAWIP 137

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD--LEEVSRSFRLS 175
             ++ F          AE   I+  F    + +  S  +++ NI  D  L  V +    S
Sbjct: 138 LAILIF--------PTAETGMIYITFVGAFFPVLISTIRAVENILHDVVLIRVGQCLGAS 189

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W  F  + +P S+PG+   + + M   WF +V +E++          G+G     +   
Sbjct: 190 RWHIFKDIVIPGSLPGIASGLTIGMGNAWFCLVTAEILAG------RYGVGYITWESYVT 243

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            +   I+  ML +  +  L    + R M  
Sbjct: 244 SNYPPIVMGMLLIGLMGALSSWAVGRGMSA 273


>gi|319941423|ref|ZP_08015751.1| hypothetical protein HMPREF9464_00970 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805043|gb|EFW01873.1| hypothetical protein HMPREF9464_00970 [Sutterella wadsworthensis
           3_1_45B]
          Length = 463

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 10/176 (5%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP   S +    + L   P     PL++  +             +++  + + I  + +
Sbjct: 24  RRPLWESALSLVLEALRVIPPLSLVPLLILWLGI----DEAPKLAIVVLASFFPIYLSAL 79

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               +  + +KE+A    +T     + I+LPG  P  +TG     G AW A + +E+ + 
Sbjct: 80  TALRSVSSKYKELAQMLGLTESARVQEILLPGAAPGILTGLRLGFGYAWRALVGAELIA- 138

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                  +GLG  I +++       V++G+L +    +  ++        +    L
Sbjct: 139 -----AASGLGYLIEDASSLARTDVVMVGILTIAGLGILCDQLFRRGAEGWTKSRL 189



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 15/217 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+ +  ++S       A L  +       L  +L+ ++ IP L  +   +++      
Sbjct: 1   MGRVFAGFLLSASAALGLALLLYRRPLWESALSLVLEALRVIPPLSLVPLLILWLGIDEA 60

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K+    LA+ F I+ S +         +L ++    +E+++   L+   +   + +P +
Sbjct: 61  PKLAIVVLASFFPIYLSALT--------ALRSVSSKYKELAQMLGLTESARVQEILLPGA 112

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG++  + +     W  +V +E+I          G+G  I  A        ++  +LT+
Sbjct: 113 APGILTGLRLGFGYAWRALVGAELIAAAS------GLGYLIEDASSLARTDVVMVGILTI 166

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV 285
            G+  L DQL  R    W+ K RL R   I    + +
Sbjct: 167 AGLGILCDQLFRRGAEGWT-KSRLNRRRKIDGGQTAL 202


>gi|91780997|ref|YP_556204.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693657|gb|ABE36854.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 279

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 22/248 (8%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------------LYVIWLGCI 385
            + +    + W      + +      +G I                       +     +
Sbjct: 22  SKGALYRWLSWIVPALVLVLWQVAARVGLIAPQVLPAPSSVAATALDLARNGDLFVHLGV 81

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R      I   I + +G+ +GF P   + +    Q++ A P     PLV+       
Sbjct: 82  SLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +    L+     + I  N + G         E+A    +      R IILPG  P 
Sbjct: 141 ---EVAKIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVIGLDRTAVVRRIILPGAMPS 197

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   AW A +++E  +       T G+G    ++ E      +VL ++I    
Sbjct: 198 ILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVIVLTIVIYAFI 251

Query: 566 VLALNRFL 573
            +  +  +
Sbjct: 252 GVVADALV 259



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 90/259 (34%), Gaps = 18/259 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLS 74
           + +       +++  +   +     +       V    + L     L  +   + LR  +
Sbjct: 29  WLSWIVPALVLVLWQVAARVGLIAPQVLPAPSSVAATALDLARNGDLFVHLGVSLLRAAA 88

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I          L   S     +L   + ++++IP L  L   +V+F           
Sbjct: 89  GFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG-------- 140

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E+A IF +  + ++ +  +    +  I   L E+++   L        + +P +MP ++ 
Sbjct: 141 EVAKIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVIGLDRTAVVRRIILPGAMPSILT 200

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +++  W  +V +E +          GIG     A +      I+  ++    +  +
Sbjct: 201 GVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVIVLTIVIYAFIGVV 254

Query: 255 YD---QLLFRPMIVWSNKF 270
            D   +LL    + W   +
Sbjct: 255 ADALVRLLEAHFLSWHANY 273


>gi|308176055|ref|YP_003915461.1| aliphatic sulfonates ABC transporter inner membrane subunit SsuC
           [Arthrobacter arilaitensis Re117]
 gi|307743518|emb|CBT74490.1| putative aliphatic sulfonates ABC transporter, inner membrane
           subunit SsuC [Arthrobacter arilaitensis Re117]
          Length = 275

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 92/267 (34%), Gaps = 11/267 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P +   +   R    I          L ++      L ++ +  V  +       + G +
Sbjct: 7   PQTRKAQPAGRQKSEIAATILRAPKWLLASVLPILTLAVWQYVTVTEIVAPWTLPTPGSV 66

Query: 368 VNH-FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       +     I+  RV++     S++ +  G  +G      + +      L 
Sbjct: 67  AAAAVELFQDGELGPHIGISTQRVLLGFFFGSLLGLAFGALVGLSKLADAFLGLSISALR 126

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P+  + PL+V  + Y   +       L+I G  + +   V            E A SF
Sbjct: 127 AVPSLAWVPLLVLWMKYGEDSK----VTLVIIGAFFPVFTTVALALRHVDAQLVEAARSF 182

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + G +  R + LP + P   +G   A   AW   + +E+         + GLG  + +S
Sbjct: 183 GLKGLKLLRTVQLPAVVPAIFSGLRLALAQAWLFLVAAELLG------ASMGLGFLLTDS 236

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G    +++ ++++  F    +  L
Sbjct: 237 QNNGRLDRLIMTIVLLAIFGKITDALL 263



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 96/251 (38%), Gaps = 20/251 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT------LDVHSLPQYASRT 68
           +    + L + + ++ +       + E   P  +     +            L  +   +
Sbjct: 27  LRAPKWLLASVLPILTLAVWQYVTVTEIVAPWTLPTPGSVAAAAVELFQDGELGPHIGIS 86

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T R+L       L    +  L   S+     L   +  ++++P L ++   V++      
Sbjct: 87  TQRVLLGFFFGSLLGLAFGALVGLSKLADAFLGLSISALRAVPSLAWVPLLVLWMKYGED 146

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV    + A F +FT+        +  +L ++   L E +RSF L G +    + +P  
Sbjct: 147 SKVTLVIIGAFFPVFTT--------VALALRHVDAQLVEAARSFGLKGLKLLRTVQLPAV 198

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + ++++  W F+VA+E++          G+G  +  +     L  ++  ++ +
Sbjct: 199 VPAIFSGLRLALAQAWLFLVAAELLGAS------MGLGFLLTDSQNNGRLDRLIMTIVLL 252

Query: 249 LGVIFLYDQLL 259
                + D LL
Sbjct: 253 AIFGKITDALL 263


>gi|317507269|ref|ZP_07965014.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
 gi|316254437|gb|EFV13762.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
          Length = 288

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 12/264 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           S  V       G +R    + F Q      +  + +I     +  V           +  
Sbjct: 23  SEPVAAGPARRGGLRRLAGKAFRQSAGVAALLALWEIAPRAGL--VDSVFLPPLSEVLKA 80

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +T      +      ++ R  +    A  + +P+G+ I + P ++    P  +L     
Sbjct: 81  GWTLLGNGQLAEHLGASLTRAGLGFAAAVALGVPLGLAIAWFPRVADYANPVLELFRNTA 140

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+ V  +     +       L+++   + ++   IAG  +      + A S    
Sbjct: 141 PLALLPVFVLVLGIGETSK----VSLVLYAAVFPVVLGTIAGVRSVDPLLVKAARSMGFG 196

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +  ++LPG  P   TG   A   +    I +E+           GLG  I  +   
Sbjct: 197 HVALFGKVVLPGAVPSVFTGVRQAAAASILVLIAAEMVG------ARAGLGYLITAAQSS 250

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            + P++ +GVL +    L +N  L
Sbjct: 251 FAIPDMYVGVLAIALVGLVVNAVL 274



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 17/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L ++   +  R       ++          A   R+     P+L++ ++   L  
Sbjct: 85  LGNGQLAEHLGASLTRAGLGFAAAVALGVPLGLAIAWFPRVADYANPVLELFRNTAPLAL 144

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+        KV          +  + V+ +       + ++   L + +RS    
Sbjct: 145 LPVFVLVLGIGETSKVS--------LVLYAAVFPVVLGTIAGVRSVDPLLVKAARSMGFG 196

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F  + +P ++P +   +  + +     ++A+EM+          G+G  I  A   
Sbjct: 197 HVALFGKVVLPGAVPSVFTGVRQAAAASILVLIAAEMVG------ARAGLGYLITAAQSS 250

Query: 236 QDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             +  +   +L +  V  + +     L R    W  
Sbjct: 251 FAIPDMYVGVLAIALVGLVVNAVLTALERRASRWRE 286


>gi|268323132|emb|CBH36720.1| putative ABC-type sulfonate/taurin/nitrate/bicarbonate transporter,
           permease protein [uncultured archaeon]
          Length = 257

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 12/239 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIAS 398
           V  ++ I  +  +    +    +   +    F++ ++   I L   +++    + + +A 
Sbjct: 13  VPLIIAILLWQFIAVYVVKDPSKLPSFSAVIFSFYELREDIPLDILVSLVHFAIGMALAF 72

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            + +P+ I +G+  ++   + P  ++L   P   + P+ +  +   H         ++  
Sbjct: 73  AVALPLAIGMGWFRNVFKAVDPIIEILRPIPPLAWIPVAILWIGLTHS----AAGFIIFI 128

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFH-ITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           G  + IL +   G    P    E       I   +  RY+  P   P   TG     G  
Sbjct: 129 GAFFPILIDSYTGFRDVPKVLVETGKVLGCIGNRKLIRYVAFPYALPSIATGTRVGMGVG 188

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKG-SFPEVVLGVLIMCCFVLALNRFLWH 575
           W   + +E+   G+      GLG  + +          VV  +LI+    L ++R   H
Sbjct: 189 WMCVVAAEMFGVGNY-----GLGFRLFQDFYFLHQMDYVVAYMLILGLVALCIDRVFRH 242



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 18/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----PQYASRTTLRMLSAMV 77
           L    L+I I+      +     P  +     +    + L    P     + +     M 
Sbjct: 10  LWLVPLIIAILLWQFIAVYVVKDPSKLPSFSAVIFSFYELREDIPLDILVSLVHFAIGMA 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++       A      R +   + PI++I++ IP L ++   +++              A
Sbjct: 70  LAFAVALPLAIGMGWFRNVFKAVDPIIEILRPIPPLAWIPVAILWIGL--------THSA 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNM 196
           A F IF    + +    Y    ++P+ L E  +        +   Y+  P+++P +    
Sbjct: 122 AGFIIFIGAFFPILIDSYTGFRDVPKVLVETGKVLGCIGNRKLIRYVAFPYALPSIATGT 181

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + M  GW  VVA+EM  VG+      G+G  +         +  + A + +LG++ L  
Sbjct: 182 RVGMGVGWMCVVAAEMFGVGNY-----GLGFRLFQDFYFLHQMDYVVAYMLILGLVALCI 236

Query: 257 QLLFRPMI 264
             +FR  +
Sbjct: 237 DRVFRHFV 244


>gi|317047581|ref|YP_004115229.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949198|gb|ADU68673.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 261

 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 105/259 (40%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V+V  + + + L   +    P +I+           L Q+ + +  R      I   
Sbjct: 17  VLLVVVWQLASQIGLLSTRILPSPENILITFWKLSASGELWQHLAISGWRAAIGFSIGGS 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 77  IGLLLGLITGTSRLGERLLDTSVQMLRNVPHLALIPLVILWFGID--------EAAKIFL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++ 
Sbjct: 129 VALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFALG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 189 LMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAAQL 242

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 243 LERVWLRWHPAYQLKEANA 261



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 85/256 (33%), Gaps = 31/256 (12%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIW----------LGCITMFRVVVLII 395
           W   V  V +      IG +      + +++L   W             I+ +R  +   
Sbjct: 13  WALPVLLVVVWQLASQIGLLSTRILPSPENILITFWKLSASGELWQHLAISGWRAAIGFS 72

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   I + +G+  G        +    Q+L   P     PLV+                L
Sbjct: 73  IGGSIGLLLGLITGTSRLGERLLDTSVQMLRNVPHLALIPLVILWFGI----DEAAKIFL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  GT + I  N   G         E+A S+ ++GW  +  +ILPG  P  + G   A G
Sbjct: 129 VALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFALG 188

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---- 571
             W   IV+E  S        +G+G     + E      VV+ +++        +     
Sbjct: 189 LMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAAQL 242

Query: 572 -----FLWHPLYLYGT 582
                  WHP Y    
Sbjct: 243 LERVWLRWHPAYQLKE 258


>gi|325003251|ref|ZP_08124363.1| sulfonate/nitrate/taurine ABC transporter permease [Pseudonocardia
           sp. P1]
          Length = 279

 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 99/257 (38%), Gaps = 17/257 (6%)

Query: 8   PPFISRRI--FPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           P   +RR+         +A +LV  + +   L    E   P  +V           LP+ 
Sbjct: 19  PASTTRRLPDLRRWISPVAILLVWQLASTTGLLAEDELASPLRVVTAAVDVTASGELPEG 78

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+ + +V+ L        L+  SR    ++ P + +++++P LG +   +++F 
Sbjct: 79  LLVSLGRVATGLVLGLAVGVGLGLLSGLSRWGDHLVDPPVQMLRTLPHLGLVPLFILWFG 138

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL  +  +    ++ M  +++  +  +   L E +     +  ++  ++ 
Sbjct: 139 IG--------ELPKVLLVALGVLFPMYLNVHAGVRGVDPKLLEAASVSGFTRAERLRHVV 190

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP  +  + +++   W  ++ +E      T     G+G  I  A +      I+  
Sbjct: 191 LPGAMPSTLTGLRLALGIAWLSIIVAE------TTSADAGLGYMIMNAREFLRTDVIVVG 244

Query: 245 MLTMLGVIFLYDQLLFR 261
           +     +    D L+ R
Sbjct: 245 LAVYALLGLGTDLLVRR 261



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 82/236 (34%), Gaps = 10/236 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +L          +A       +  +           +     +++ RV   +++   
Sbjct: 36  VAILLVWQLASTTGLLAEDELASPLRVVTAAVDVTASGELPEGLLVSLGRVATGLVLGLA 95

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + +G+  G        + P  Q+L   P     PL +       L       LL+  G
Sbjct: 96  VGVGLGLLSGLSRWGDHLVDPPVQMLRTLPHLGLVPLFILWFGIGELPK----VLLVALG 151

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +  NV AG         E AS    T     R+++LPG  P  +TG   A G AW 
Sbjct: 152 VLFPMYLNVHAGVRGVDPKLLEAASVSGFTRAERLRHVVLPGAMPSTLTGLRLALGIAWL 211

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + IV+E            GLG  I  + E      +V+G+ +     L  +  +  
Sbjct: 212 SIIVAE------TTSADAGLGYMIMNAREFLRTDVIVVGLAVYALLGLGTDLLVRR 261


>gi|70733048|ref|YP_262821.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68347347|gb|AAY94953.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 287

 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T  ++L A ++ +L       +AA       ++ P+LD+MQ++P   +L  T+ 
Sbjct: 94  WQETMETLAQVLFATLVCVLIGVPLGIVAAHKPLFYTMMRPVLDLMQTVPTFVYLIPTLT 153

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  + ++P++L +  ++F  S  Q   
Sbjct: 154 LFGL---GVVPGLISTVVFAIAAP-----IRLTYLGIRDVPQELMDAGKAFGCSRRQLLS 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 206 RIELPHAMPSIAAGITQCIMLSLSMVVIAALV-------GADGLGKPVVNALNTADIALG 258

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ +  + D++  +P
Sbjct: 259 FEAGLAIVLLAIMLDRICKQP 279



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 72/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    ++V  F     L        T+ +V+   ++  +I +P+GI    +P   + ++P
Sbjct: 75  WGLTAFVVLSFLLILNLGYWQETMETLAQVLFATLVCVLIGVPLGIVAAHKPLFYTMMRP 134

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 135 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELM 190

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 191 DAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 243

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 244 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 279


>gi|254505374|ref|ZP_05117521.1| ABC transporter, membrane spanning protein [proline/glycine
           betaine] [Vibrio parahaemolyticus 16]
 gi|219551491|gb|EED28469.1| ABC transporter, membrane spanning protein [proline/glycine
           betaine] [Vibrio parahaemolyticus 16]
          Length = 299

 Score =  114 bits (285), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +     RT   +    ++S++         A+S R+   + P+LDIMQ++P   +L   
Sbjct: 98  GMWDDTMRTLSIITVCTMLSIVLGIPIGIAMARSNRVQSTVTPMLDIMQTMPAFVYLIPV 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GK+ G     I+AI       +       +  + +++ E S +F  +  Q+
Sbjct: 158 VMLLG---IGKIPGLIAVVIYAIP-----PVIRLTNLGIRLVDKEVLEASTAFGANAKQR 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q   
Sbjct: 210 LFGVQLPLAMPTIMAGINQTIMMALSMVVIASMIGV-------KGLGQPVLKSITNQYFT 262

Query: 240 AILYAMLTMLGVIFLYDQ 257
             L     ++ +  L+D+
Sbjct: 263 LGLLNGFAIVALAILFDR 280



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 74/232 (31%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  +               +W+     +          +      T+  + V  +++ +
Sbjct: 60  STPWVITLAVFTALVYFASRSWKLGVGCLVSLLLIGYFGMWDDTMRTLSIITVCTMLSIV 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSTVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E +++F     +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEASTAFGANAKQRLFGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L    +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGFAIVALAILFDR 280


>gi|222102581|ref|YP_002539620.1| ABC transporter membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium vitis S4]
 gi|221739182|gb|ACM39915.1| ABC transporter membrane spanning protein (nitrate/sulfonates)
           [Agrobacterium vitis S4]
          Length = 282

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 17/265 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R     I  L  FVL    +       +    P  I++ +        L  +   ++LR+
Sbjct: 31  RAAASVILPLAGFVLWELAVRFGWASGRLIPAPSRILETLWQLTITGELAHHLVASSLRV 90

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   V       +   L      L  +L P L  +++IP + ++   +++F         
Sbjct: 91  LVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLFILWFGIF------ 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  I T   + +   +  +L  + R + EV + FRLS  +  W +  P  +P  
Sbjct: 145 --ETSKIVLIATGVFFPVYLGISTALREVDRKIVEVGKIFRLSNLELVWRILFPAVLPSF 202

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V ++   +  GW FVVA+E +   +      G+G  +    +      I+ A+L    + 
Sbjct: 203 VVSLRAGLGLGWMFVVAAEFMGASE------GLGYLLVDGQQLGKPDQIIAAILAFAVIG 256

Query: 253 FLYDQL---LFRPMIVWSNKFRLER 274
            L D L   L  P++ W + +  +R
Sbjct: 257 KLSDALLVALTAPLLRWQDAYGGDR 281



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 83/248 (33%), Gaps = 17/248 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------I 385
           +L   +  + ++      V+  +A+   W S   I       + L+ + +          
Sbjct: 26  RLGLYRAAASVILPLAGFVLWELAVRFGWASGRLIPAPSRILETLWQLTITGELAHHLVA 85

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV+V  +  +     +G   G+   +   + P  Q + A P+  + PL +     + 
Sbjct: 86  SSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLFILWFGIFE 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+  G  + +   +            EV   F ++       I+ P + P 
Sbjct: 146 TSK----IVLIATGVFFPVYLGISTALREVDRKIVEVGKIFRLSNLELVWRILFPAVLPS 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +V       G  W   + +E          + GLG  + +  + G   +++  +L     
Sbjct: 202 FVVSLRAGLGLGWMFVVAAEFMG------ASEGLGYLLVDGQQLGKPDQIIAAILAFAVI 255

Query: 566 VLALNRFL 573
               +  L
Sbjct: 256 GKLSDALL 263


>gi|323530093|ref|YP_004232245.1| choline ABC transporter permease [Burkholderia sp. CCGE1001]
 gi|323387095|gb|ADX59185.1| choline ABC transporter, permease protein [Burkholderia sp.
           CCGE1001]
          Length = 300

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 75/244 (30%), Gaps = 11/244 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E+F  +  +   +  +       V      + W+   + +                IT+ 
Sbjct: 34  ESFAAVVEHSLQAVPMWALMAFFVGIGLWRVGWRFALFTLLAMLLIYGTGFWDQMVITLG 93

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    I+ ++ +P+GIW      +   ++P   L+   PA V+            +  
Sbjct: 94  LTLSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLFGLGRVPG 153

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +  +             G      +  E   +F  T W+    +  P   P  +T
Sbjct: 154 ILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMT 209

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       A +  I++ +   G       GLG  +  S ++          L +    + 
Sbjct: 210 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVMLAII 262

Query: 569 LNRF 572
           L+R 
Sbjct: 263 LDRI 266


>gi|299770167|ref|YP_003732193.1| ABC transporter permease [Acinetobacter sp. DR1]
 gi|298700255|gb|ADI90820.1| ABC transporter permease [Acinetobacter sp. DR1]
          Length = 262

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 93/214 (43%), Gaps = 16/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L      +  +     ++  +   +  TL A S+ L  ++ P+ + ++ +P+LG 
Sbjct: 60  LETGELWLNTWGSLKKAGIGFILGSISGLILGTLLAYSKVLNALVSPLFNSIRQVPLLGL 119

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                ++F N         E A IF I  +  + +  + +Q L +     +E++R ++ S
Sbjct: 120 TPLIALWFGNG--------EEAKIFIIALASFFPLVINTFQGLSHNDAKYDEIARIYQFS 171

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+KF  + +P ++P ++  + +++   W    ASE++          G+G+ +  A   
Sbjct: 172 FWRKFKKIRLPQALPHILTGLNLAVPFTWITTTASELLFNAGA-----GLGNLMMKAEIN 226

Query: 236 QDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
            ++  +L   +T+            L+ + ++ W
Sbjct: 227 AEMDILLVCAITVTLCGAFMTAGIHLISKRLLQW 260



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 74/198 (37%), Gaps = 12/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ +  +  I+ SI  + +G  + +   +++ + P    +   P     PL+        
Sbjct: 72  SLKKAGIGFILGSISGLILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFG--- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N       ++   + + ++ N   G S     + E+A  +  + WR ++ I LP   P+
Sbjct: 129 -NGEEAKIFIIALASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPH 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM--- 562
            +TG   A    W  +  SE+           GLG  + ++        +++  + +   
Sbjct: 188 ILTGLNLAVPFTWITTTASELLFNAG-----AGLGNLMMKAEINAEMDILLVCAITVTLC 242

Query: 563 CCFVLALNRFLWHPLYLY 580
             F+ A    +   L  +
Sbjct: 243 GAFMTAGIHLISKRLLQW 260


>gi|81429307|ref|YP_396308.1| putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78610950|emb|CAI56002.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 280

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSA 75
           +FDL+   L I II  + +     T    ++      L +       +  ++T   +L++
Sbjct: 43  VFDLIPIWLFIVIIAGVTYFANRDTKKWGLIIFEAAGLLLIWNLDFWRDMTQTLTLVLTS 102

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +ISL+         AKS     +  PILD MQ++P   +L   V +F     G V G  
Sbjct: 103 SLISLVIGVPLGIWMAKSDIAQAIFKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVF 159

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P +L E + S+  + WQK   + +P +   L+  
Sbjct: 160 ASVIFAMP-----PTVRMTNLGIRQVPTELIEAADSYGSTEWQKLIKVQLPLAKSTLMAG 214

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D      A L ++ +  + 
Sbjct: 215 VNQSMMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGGFAAGLAIVILAIII 267

Query: 256 DQL 258
           D+L
Sbjct: 268 DRL 270



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 75/236 (31%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           ++ I+ F V+       A      W  I +          L        T+  V+   +I
Sbjct: 46  LIPIWLFIVIIAGVTYFANRDTKKWGLIIFEAAGLLLIWNLDFWRDMTQTLTLVLTSSLI 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I +P+GIW+       +  +P    +   PA V+    V+      +       +  
Sbjct: 106 SLVIGVPLGIWMAKSDIAQAIFKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF- 164

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    P +  E A S+  T W+    + LP      + G   +   
Sbjct: 165 ---AMPPTVRMTNLGIRQVPTELIEAADSYGSTEWQKLIKVQLPLAKSTLMAGVNQSMML 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +           GLG  +  +  +          L +    + ++R 
Sbjct: 222 ALSMVVIASMIG-------AMGLGTRVYFAVGRNDAGGGFAAGLAIVILAIIIDRL 270


>gi|157164707|ref|YP_001467469.1| ABC transporter, permease protein [Campylobacter concisus 13826]
 gi|112801051|gb|EAT98395.1| taurine transport system permease protein TauC [Campylobacter
           concisus 13826]
          Length = 241

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 83/220 (37%), Gaps = 11/220 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   F       ++     ++ R V+ +++ SI+ + VG+  G  P  ++  +P   LL
Sbjct: 31  VVGAFFELAKSGKLLLGVTDSLIRYVIGLLVGSIVAVLVGLIFGLFPKFANAFEPLIGLL 90

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  + PL+V                ++ +   + +L   I    + PN+    A  
Sbjct: 91  RPISPIAWIPLIVLAFGIGDK----PTIFIIAYAIFFPMLLLTINAVKSVPNELVLAARG 146

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  +  +    +I+P      ++G   A   AW   +V E+          +GLG  I +
Sbjct: 147 FGASKMQIITGVIMPASLFSIISGLKLAASLAWINLVVGEMVG------AQSGLGYLIID 200

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +  +     V+  + ++    + +N F++  +  Y    L
Sbjct: 201 ARNQLRIDSVMAVIFVIGVIGIVIN-FIFSLIERYAGERL 239



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 78/201 (38%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + + +R +  +++  +   +   +     +      P++ +++ I  + ++  
Sbjct: 42  GKLLLGVTDSLIRYVIGLLVGSIVAVLVGLIFGLFPKFANAFEPLIGLLRPISPIAWIPL 101

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+ F           +   IF I  +  + M      ++ ++P +L   +R F  S  Q
Sbjct: 102 IVLAFGIG--------DKPTIFIIAYAIFFPMLLLTINAVKSVPNELVLAARGFGASKMQ 153

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + ++ S  W  +V  EM+          G+G  I  A  +  +
Sbjct: 154 IITGVIMPASLFSIISGLKLAASLAWINLVVGEMVG------AQSGLGYLIIDARNQLRI 207

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
            +++  +  +  +  + + + 
Sbjct: 208 DSVMAVIFVIGVIGIVINFIF 228


>gi|315281743|ref|ZP_07870304.1| glycine betaine transport system permease protein opuAB [Listeria
           marthii FSL S4-120]
 gi|313614611|gb|EFR88194.1| glycine betaine transport system permease protein opuAB [Listeria
           marthii FSL S4-120]
          Length = 282

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+G   +   G +   +  ++V ++ I        +  ++T   +L++ +I+L+
Sbjct: 52  LFIILLVLGTFWVNRKGKKWGLITFEVVGLLLIW--NLDFWRDMTQTLTLVLTSSLIALV 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    AKS  +  +  P+LD MQ++P   +L   V +F     G V G   + IFA
Sbjct: 110 IGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +  +L E + SF  + WQK W + +P +   ++  +  S+ 
Sbjct: 167 MP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G+ +  A+   D      A + ++ V  + D+L
Sbjct: 222 LALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVLGTFWVNRKGKKWGLITFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|23100910|ref|NP_694377.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22779144|dbj|BAC15411.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 286

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F+L++ +I   + G +       IV +  +      L      T   +L A ++S++ 
Sbjct: 59  VLFILIVAVIAFFVSGKKFGLAAFSIVGLWFVY--NQGLWDALMSTVTLVLLASLLSVIV 116

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L +KS+    +  PILD MQ++P   +L   V +F     G V G   + IFA 
Sbjct: 117 GVPIGILMSKSKIANTIFTPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASLIFAT 173

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  +         +  + +DL E S SF  +G QK + + +P +   ++  +  ++  
Sbjct: 174 PPTVRF-----TNLGIRQVSKDLVEASDSFGSTGTQKLFKVELPMARSTIMAGINQTVML 228

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+GS +  +++   +     A + ++ +  + D++
Sbjct: 229 ALSMVVIASMI-------GAPGLGSQVLSSLQRASVGPGFVAGIGIVILAIIIDRI 277



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 11/213 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L I    V+     G  +    + +    +     +      T+  V++  +++ I
Sbjct: 56  IPPVLFILIVAVIAFFVSGKKFGLAAFSIVGLWFVYNQGLWDALMSTVTLVLLASLLSVI 115

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +      ++   P    +   PA V+    V+      +       +     
Sbjct: 116 VGVPIGILMSKSKIANTIFTPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASLIFATPP 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T  +       G      D  E + SF  TG +    + LP      + G       A +
Sbjct: 176 TVRF----TNLGIRQVSKDLVEASDSFGSTGTQKLFKVELPMARSTIMAGINQTVMLALS 231

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             +++ +           GLG+ +  S ++ S 
Sbjct: 232 MVVIASMIG-------APGLGSQVLSSLQRASV 257


>gi|310767201|gb|ADP12151.1| Aliphatic sulfonates transport permease protein [Erwinia sp.
           Ejp617]
          Length = 263

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 102/256 (39%), Gaps = 18/256 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84
           V++  + +             + + +    L     L Q+ + ++ R      I      
Sbjct: 22  VVLWQLASWSGWLSTRILPSPEAIVVTFCNLSASGELWQHLAISSWRAAIGFSIGGSIGL 81

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   +   SR    +L   + +++++P L  +   +++F           E A IF +  
Sbjct: 82  LLGLITGMSRLGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ETAKIFLVAL 133

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  + +  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W
Sbjct: 134 GTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMW 193

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
             ++ +E I          GIG     A +      ++ A++    +  L D   QLL R
Sbjct: 194 LTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLER 247

Query: 262 PMIVWSNKFRLERTTG 277
             + W   ++L+    
Sbjct: 248 VWLRWHPAYQLKEENA 263



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +   I   I + +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRAAIGFSIGGSIGLLLGLITGMSRLGERLLDTSVQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  
Sbjct: 123 ----DETAKIFLVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALNR---------FLWHPLYLYGTR 583
                 +            WHP Y     
Sbjct: 233 LLGKLADVSAQLLERVWLRWHPAYQLKEE 261


>gi|254431616|ref|ZP_05045319.1| integral membrane components of other binding-protein-dependent
           transport system [Cyanobium sp. PCC 7001]
 gi|197626069|gb|EDY38628.1| integral membrane components of other binding-protein-dependent
           transport system [Cyanobium sp. PCC 7001]
          Length = 275

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 95/272 (34%), Gaps = 26/272 (9%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
             P         +R+     +     V  V +     +   +V+         VI  G  
Sbjct: 13  PQPAAAPATERLKRLGQHPWVLGLAGVLAVVVFWTAVTSAGLVDPLFLPSPSGVIAAGQS 72

Query: 384 -----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                        ++ RV     +++ + +P+GI +G    I   ++P   L+   PA  
Sbjct: 73  QAAQGVLWADLVASVGRVFAGFALSAAVALPLGIAMGTSTVICRLLEPLMALIRYMPAPA 132

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F PL++       L       LL+  GT ++    ++      PN+  E A +      +
Sbjct: 133 FIPLLIIYFGLGEL----PKILLIFIGTLFFNTLMIMDAVKFVPNELVETALTLGGRTSQ 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               +I P I P  +         AWN  IV+E+ +         GLG  I+ +      
Sbjct: 189 VLLRVITPCITPQVIDTYRINMASAWNLVIVAELVA------ANEGLGKRISLAQRFLRT 242

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
            E+ LG++++    L ++   R L      + 
Sbjct: 243 DEIFLGLIVIGLIGLLIDLGFRLLMRRTCRWA 274



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 86/230 (37%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++           L      +  R+ +   +S             S  +  +L 
Sbjct: 60  LPSPSGVIAAGQSQAAQGVLWADLVASVGRVFAGFALSAAVALPLGIAMGTSTVICRLLE 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ +++ +P   F+   ++YF           EL  I  IF   ++  T  +  ++  +
Sbjct: 120 PLMALIRYMPAPAFIPLLIIYFGLG--------ELPKILLIFIGTLFFNTLMIMDAVKFV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +L E + +      Q    +  P   P ++    ++M+  W  V+ +E++   +    
Sbjct: 172 PNELVETALTLGGRTSQVLLRVITPCITPQVIDTYRINMASAWNLVIVAELVAANE---- 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             G+G  I+LA +      I   ++ +  +  L D   +LL R    W+N
Sbjct: 228 --GLGKRISLAQRFLRTDEIFLGLIVIGLIGLLIDLGFRLLMRRTCRWAN 275


>gi|148256222|ref|YP_001240807.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408395|gb|ABQ36901.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 263

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV      A+++ I +GI IG     S  + P  +LL   PA  + PL +       
Sbjct: 69  SLARVFAGYGAAALLGIALGIAIGRSRAASDLLLPPLELLRPIPAVAWIPLSILIF---- 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + +  +   G  + I+ N + G +         A S         + I+LPG  P 
Sbjct: 125 TSSEVSMIFITFIGALFPIILNTVHGVANVDQRLIASARSLGGNRLAILQEIVLPGAAPA 184

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG     G +W   + +E+ S         G+G Y  E+    ++ ++V+G+L++   
Sbjct: 185 IVTGLAIGMGTSWFCLVTAEMISG------QFGIGYYTWEAYTLQNYADIVVGMLVIGLM 238

Query: 566 VLA 568
            + 
Sbjct: 239 GMG 241



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+     +    P ++ +   + L    L  +   +  R+ +    + L          
Sbjct: 33  LNLGAVTFRNVPPPTEVAEAAVVLLRSPKLMAHLGSSLARVFAGYGAAALLGIALGIAIG 92

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +L+P L++++ IP + ++  +++ F +        +E++ IF  F   ++ + 
Sbjct: 93  RSRAASDLLLPPLELLRPIPAVAWIPLSILIFTS--------SEVSMIFITFIGALFPII 144

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    + N+ + L   +RS   +       + +P + P +V  + + M   WF +V +E
Sbjct: 145 LNTVHGVANVDQRLIASARSLGGNRLAILQEIVLPGAAPAIVTGLAIGMGTSWFCLVTAE 204

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           MI          GIG Y   A   Q+   I+  ML +  +          L R ++ W 
Sbjct: 205 MISG------QFGIGYYTWEAYTLQNYADIVVGMLVIGLMGMGSSWALTSLGRVLMPWH 257


>gi|93005914|ref|YP_580351.1| substrate-binding region of ABC-type glycine betaine transport
           system [Psychrobacter cryohalolentis K5]
 gi|92393592|gb|ABE74867.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Psychrobacter cryohalolentis K5]
          Length = 646

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 93/232 (40%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+I ++ +L                    +    L      T   ++ ++ ++++     
Sbjct: 407 LIIALVTVLAWFAVRKIWFALACGAGLFLIGAFGLWGALIDTLALLIVSVWVTVVIGIPI 466

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               + S+ L  ++ P+LD+MQ++P   +L   ++ F           ++ A+FA     
Sbjct: 467 GIAMSGSKLLRKIVTPVLDVMQTMPSFVYLIPVLMLFGIG--------KVPALFATIIYA 518

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +  ++ E  RSF  +  Q   ++ +P ++P ++  +  ++      
Sbjct: 519 LPPLIRLTTLGITQVNHEMVEAGRSFGSTHLQLLIWIKLPQALPSIMAGVNQAVMMSLSM 578

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI         PG+G  +  +I+  ++   L A   ++ V  + D++
Sbjct: 579 VVLASMI-------GAPGLGEDVLQSIQTLNIGQGLQAGTAIVIVAIIIDRI 623



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 18/261 (6%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           + SW+  SPL+N +  + R  G + F              +  +L +    ++  +   +
Sbjct: 357 FPSWSLESPLNNTLASVVRNHGDV-FRTISTVALTYLLLPIERLLTLIPPWLIIALVTVL 415

Query: 360 AWQSIGYIVNHFTYQDVLYVI-----WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           AW ++  I         L++I     W   I T+  ++V + +  +I IP+GI +     
Sbjct: 416 AWFAVRKIWFALACGAGLFLIGAFGLWGALIDTLALLIVSVWVTVVIGIPIGIAMSGSKL 475

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+           +      I      ++     G +
Sbjct: 476 LRKIVTPVLDVMQTMPSFVYLIPVLMLFGIG----KVPALFATIIYALPPLIRLTTLGIT 531

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
              ++  E   SF  T  +   +I LP   P  + G   A   + +  +++ +       
Sbjct: 532 QVNHEMVEAGRSFGSTHLQLLIWIKLPQALPSIMAGVNQAVMMSLSMVVLASMIG----- 586

Query: 534 LRTTGLGAYIAESTEKGSFPE 554
               GLG  + +S +  +  +
Sbjct: 587 --APGLGEDVLQSIQTLNIGQ 605


>gi|328880173|emb|CCA53412.1| Choline or glycine betaine ABC transporter,permease protein
           [Streptomyces venezuelae ATCC 10712]
          Length = 665

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 77/496 (15%), Positives = 154/496 (31%), Gaps = 48/496 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
                    G++   + G++             +      +     +T   M+ A+  S+
Sbjct: 117 GWAGVTAAAGLLAWRVAGVRLALTSVAAFGACGL----LGMWVPTMQTLALMVVAVAASV 172

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   +    A  S R+  +L P+LD MQ +P   +L   V+ F    P        AA+ 
Sbjct: 173 LLGGLLGLAAGLSDRMDRILRPVLDTMQVLPAFAYLLPVVLVFGIGVP--------AAVL 224

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A        M       L      + E + S   +G Q+     +P +   L+  +  S+
Sbjct: 225 ATVVYAAPPMARLTALGLRGADAGVMEAAASLGATGRQRLLTARLPLARKELLLGVNQSI 284

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                  V + +I  G       G+G  +  A+   D+ A L A + ++ +  + D+   
Sbjct: 285 MMALGMAVIASVIGAG-------GLGDRVYQALASVDVGAALAAGVPIVLLAVVLDR--- 334

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLF---------RKTNFLRFIGYSSWNFFSPLSN 311
              +  +   RL           W + L          R  + L +    + +   P++ 
Sbjct: 335 ---VTAAAGERLGTAPAHGSRLRWAVALAATAAVAVAGRLADRLTWPDTWTLDVAEPVNT 391

Query: 312 NVKKLCRTLGV------IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA----W 361
            V  +   L            +   F     N     +  + W+ V+  V         W
Sbjct: 392 AVDWMTAHLYSGVPFVGGTADWAAGFTTWVLNPLRDGLQWLPWWSVLLTVGALALLIGTW 451

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++    V       VL V      T+ +V+  + +  ++ + +GI       +   ++P 
Sbjct: 452 RTAVTAVLAMAAIGVLGVWDPALDTLSQVLAAVAVTLLLGVALGIAAARSTRLGRALRPV 511

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             +    P  V+   VV+              +  +             G         E
Sbjct: 512 LDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI----TAQGVRGVDPAAME 567

Query: 482 VASSFHITGWRWWRYI 497
            + S   TG +    +
Sbjct: 568 SSRSLGATGRQQLFQV 583



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             + +L +G + +L+   +          +    + V  +   A  T  ++L+A+ ++LL
Sbjct: 434 WWSVLLTVGALALLIGTWRTAVTAV----LAMAAIGVLGVWDPALDTLSQVLAAVAVTLL 489

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+S RLG  L P+LD+ Q++P   +L   V  F       V  A + A+ A
Sbjct: 490 LGVALGIAAARSTRLGRALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPA 549

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +             Q +  +     E SRS   +G Q+ + + 
Sbjct: 550 VVRI--------TAQGVRGVDPAAMESSRSLGATGRQQLFQVQ 584



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 61/228 (26%), Gaps = 19/228 (8%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI----- 406
             GV       +            V      G + M+   +  +   ++ +   +     
Sbjct: 118 WAGVTAAAGLLAWRVAGVRLALTSVAAFGACGLLGMWVPTMQTLALMVVAVAASVLLGGL 177

Query: 407 ---WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                G    +   ++P    +   PA  +   VV               L  +      
Sbjct: 178 LGLAAGLSDRMDRILRPVLDTMQVLPAFAYLLPVVLVFGIG----VPAAVLATVVYAAPP 233

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +      G         E A+S   TG +      LP      + G   +   A   +++
Sbjct: 234 MARLTALGLRGADAGVMEAAASLGATGRQRLLTARLPLARKELLLGVNQSIMMALGMAVI 293

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + V   G       GLG  + ++         +   + +    + L+R
Sbjct: 294 ASVIGAG-------GLGDRVYQALASVDVGAALAAGVPIVLLAVVLDR 334


>gi|220927889|ref|YP_002504798.1| binding-protein-dependent transporters inner membrane component
           [Clostridium cellulolyticum H10]
 gi|219998217|gb|ACL74818.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulolyticum H10]
          Length = 255

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M+R  V  ++A+   + +G+ +G+  +  S + P  QL+       +FP +V       
Sbjct: 58  SMYRFFVGYLLAAFSAVTLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLIFGIGD 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +++     + IL   +         + +VA +F I        I+LP  FP 
Sbjct: 118 L----PAIVIIFIAAFFPILLATVNAVGKVDQTYIKVAKNFGIKQPMLLTKIVLPAAFPS 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             +G   A G AW   +  E+          TGLG  I ++        ++ 
Sbjct: 174 IASGLHIALGTAWVFLVAGEMVG------AQTGLGFMIIDARNNLRADLLLA 219



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +L  G +++          P D+ +     +   +L      +  R     +++   
Sbjct: 13  LILILWQGAVSLGYWNQALLPSPPDVGNGFLELVSSGTLFAGVKSSMYRFFVGYLLAAFS 72

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +    R     + P++ +++ I  + +  F V+ F           +L AI  I
Sbjct: 73  AVTLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLIFGIG--------DLPAIVII 124

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F +  + +  +   ++  + +   +V+++F +        + +P + P +   + +++  
Sbjct: 125 FIAAFFPILLATVNAVGKVDQTYIKVAKNFGIKQPMLLTKIVLPAAFPSIASGLHIALGT 184

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W F+VA EM+          G+G  I  A        +L  +L++  +  + D  +
Sbjct: 185 AWVFLVAGEMVGAQT------GLGFMIIDARNNLRADLLLANILSIGIIGLILDSFI 235


>gi|330956993|gb|EGH57253.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 281

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  LVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ PILD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAHKPMFYTIIRPILDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +          I   W    +++  F     L+       T+ +V+   ++  +I +P
Sbjct: 52  LVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + I+P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 112 LGIIAAHKPMFYTIIRPILDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 169 IRL-TYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 228 AALVG-------ADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|325521967|gb|EGD00659.1| choline ABC transporter, permease protein [Burkholderia sp. TJI49]
          Length = 298

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  V+ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAVVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IGI    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGIGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAAVVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|284046292|ref|YP_003396632.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283950513|gb|ADB53257.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 288

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 17/218 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L  + L ++   +  R+L  +  +L+F  V   L A  +   +V+ P ++ ++++P L 
Sbjct: 84  GLSGYYLHEHLWASLSRILRGVGFALVFGVVLGLLLATVKPFRVVVEPYVNFVRALPPLA 143

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           + +  +++F      K        ++ +F +    +  S+   +  I R+  + +R+   
Sbjct: 144 YFSLLIIWFGIEDTSK--------VWLLFLAAFPPIALSVLSGVQGIRRERIDAARALGA 195

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
             WQ   ++ +P  +P L     +++   W  +VA+E +        +PGIG       K
Sbjct: 196 GRWQVVRFVTLPSVLPELFTGTRLALGFAWTTIVAAETV------DGIPGIGGLAWATKK 249

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            Q     +  ++ +     + DQL   L + ++ W  K
Sbjct: 250 FQQTDVAVLCIIAIGLTAIVLDQLVKQLEKRVVPWRGK 287



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++  +  A +  + +G+ +         ++P+   + A P   +F L++      
Sbjct: 96  ASLSRILRGVGFALVFGVVLGLLLATVKPFRVVVEPYVNFVRALPPLAYFSLLIIWFGIE 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+       I  +V++G      +  + A +     W+  R++ LP + P
Sbjct: 156 DTSKVW----LLFLAAFPPIALSVLSGVQGIRRERIDAARALGAGRWQVVRFVTLPSVLP 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A G AW   + +E            G+G     + +       VL ++ +  
Sbjct: 212 ELFTGTRLALGFAWTTIVAAETVDG------IPGIGGLAWATKKFQQTDVAVLCIIAIGL 265

Query: 565 FVLALNRFL 573
             + L++ +
Sbjct: 266 TAIVLDQLV 274


>gi|218261441|ref|ZP_03476256.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224016|gb|EEC96666.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii
           DSM 18315]
          Length = 271

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +LS+ +I+LL          ++ +   V+ P+LD+MQ++P   +L   V++F 
Sbjct: 85  TMQTVALVLSSTIIALLLGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFFG 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V GA    IFA+       +       +  +P D+ E +RSF  +  Q  + + 
Sbjct: 145 L---GPVPGAFATVIFAMP-----PVVRLTDLGIRQVPEDIVEATRSFGATSGQLLFKVQ 196

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + MI  G       G+G  +   I +  +      
Sbjct: 197 LPLALPTIMAGVNQTIMMALSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEG 249

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 250 GIAVVILAIVLDRI 263



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 75/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASII 400
           ++        +  +A   A +    +             W     T+  V+   IIA ++
Sbjct: 43  WVPFYLMIAGIAALAWWKAGKGTAVLTLLGLLLIWGMGFWVQTMQTVALVLSSTIIALLL 102

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GIW G     +  I+P   L+   PA V+    V       +       +      
Sbjct: 103 GVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF----A 158

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G    P D  E   SF  T  +    + LP   P  + G       A + 
Sbjct: 159 MPPVVRLTDLGIRQVPEDIVEATRSFGATSGQLLFKVQLPLALPTIMAGVNQTIMMALSM 218

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++ + S G       GLG  + +   +        G + +    + L+R 
Sbjct: 219 VVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263


>gi|170695677|ref|ZP_02886820.1| choline ABC transporter, permease protein [Burkholderia graminis
           C4D1M]
 gi|170139476|gb|EDT07661.1| choline ABC transporter, permease protein [Burkholderia graminis
           C4D1M]
          Length = 300

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+  ISL+         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 11/247 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              E+F  +  +   +  +       V      + W+   + +                I
Sbjct: 31  KVIESFAAIVEHGLQAVPMWALMAFFVGIGLWRVGWRFALFTLLAMLLIYGTGFWDQMVI 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    I+ ++ +P+GIW      +   ++P   L+   PA V+            
Sbjct: 91  TLGLTLSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLFGLGR 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L   +  +             G      +  E   +F  T W+    +  P   P 
Sbjct: 151 VPGILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       A +  I++ +   G       GLG  +  S ++          L +   
Sbjct: 207 IMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVML 259

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 260 AIILDRI 266


>gi|50084690|ref|YP_046200.1| ABC transporter permease [Acinetobacter sp. ADP1]
 gi|49530666|emb|CAG68378.1| putative permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 262

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 94/214 (43%), Gaps = 16/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L      +  +     ++  +   +  +L A S+ L  ++ P+ + ++ +P+LG 
Sbjct: 60  LETGELWLNTWGSLKKAGIGFILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGL 119

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                ++F N         E A IF I  +  + +  + YQ L +     +E++R ++ S
Sbjct: 120 TPLIALWFGNG--------EEAKIFIIALASFFPLVINTYQGLSHNDAKYDEIARIYQFS 171

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+KF  + +P ++P ++  + +++   W    ASE++          G+G+ +  A   
Sbjct: 172 FWRKFKKIRLPQALPHILTGLNLAIPFTWITTTASELLFNAGA-----GLGNLMMKAEIN 226

Query: 236 QDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
            ++  +L   +T+            L+ + +++W
Sbjct: 227 AEMDILLVCAITVTLCGAFMTASIHLISKRLLLW 260



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 75/198 (37%), Gaps = 12/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ +  +  I+ SI  + +G  + +   +++ + P    +   P     PL+        
Sbjct: 72  SLKKAGIGFILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFG--- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N       ++   + + ++ N   G S     + E+A  +  + WR ++ I LP   P+
Sbjct: 129 -NGEEAKIFIIALASFFPLVINTYQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPH 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM--- 562
            +TG   A    W  +  SE+           GLG  + ++        +++  + +   
Sbjct: 188 ILTGLNLAIPFTWITTTASELLFNAG-----AGLGNLMMKAEINAEMDILLVCAITVTLC 242

Query: 563 CCFVLALNRFLWHPLYLY 580
             F+ A    +   L L+
Sbjct: 243 GAFMTASIHLISKRLLLW 260


>gi|297171174|gb|ADI22183.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF0200_34B07]
 gi|297171298|gb|ADI22304.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured actinobacterium HF0200_46I24]
          Length = 681

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 87/577 (15%), Positives = 189/577 (32%), Gaps = 93/577 (16%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T   +L ++ +++   F  A  A KSRR+  ++ P LD+MQ++P   +L   ++ F 
Sbjct: 116 SMNTLGMVLVSIPLAIGVGFGMAVAAYKSRRINAIIQPTLDLMQTVPTFAYLIPILLLFG 175

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V+G   +AI+A        M  +M   L  +P ++ E       +  Q+FW++ 
Sbjct: 176 F---GPVVGVVASAIYA-----CPPMARNMILGLQKVPPEVLEAGLMSGSTRRQQFWWVR 227

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  +  +       V+ + +I           IG  +   +++      L A
Sbjct: 228 VPSALPNIMIGVNQTTMAALSMVIIAAIIGSSAD------IGWEVLSTMRKAQFGQSLLA 281

Query: 245 MLTMLGVIFLYDQLLF----------RPMIVWSNKFRLERTTGIYPADSWVLYLF---RK 291
            + +  +  + D++ +          R  +  S +++         +   VL  F    +
Sbjct: 282 GIVIALIAMVLDRVSWGFTDRTRAVERRHLSASERWKPWLIAFGLASGFVVLSFFVPLIR 341

Query: 292 TNFLRFIGYSSWNFFSPLSNNVK-----------------------KLCRTLGVIRFHFP 328
           T     I Y +      LS                            L + +    + F 
Sbjct: 342 TYPEALIFYPADPINDALSYVTANHAAVTDAIKKSFLFYYLLPIKVGLTKAISPFSWGFS 401

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVV---CGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382
                + +      +  I+ F  +     VA+ +    + + +    +  V+ V+ L   
Sbjct: 402 LTPWIIGAYAFAVALFSIWLFVRMSWKSAVAVVVGGGLLYFGITSVPWLSVILVVTLLAY 461

Query: 383 --------------------------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                                        +++  +  ++   ++    GIW      +S+
Sbjct: 462 QVGGRRTALLSLFGCLFMLFTGVWGEAMTSVYMCLAAVVACLLVGGATGIWACQNNRVSN 521

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I+P    L   P  V     +           L +    I     Y       G    P
Sbjct: 522 FIRPINDTLQTMPLFVILIPFLMFFQIGEFTSFLAIVAYAIVPVIRY----TEHGLRNVP 577

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E A +   T  +    + +P   P  + G       A    +++ +         +
Sbjct: 578 TEVVEAAQAMGCTRRQLLWEVKMPLAIPEIMLGLNQTVMFALAMLVITALVG-------S 630

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG  +  +       + ++  L M    +  +R +
Sbjct: 631 RGLGQSVYIALSAADAGKGIVAGLGMALIAIIADRII 667



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 82/200 (41%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   A  +    L+A+V  LL        A ++ R+   + PI D +Q++P+   L   
Sbjct: 483 GVWGEAMTSVYMCLAAVVACLLVGGATGIWACQNNRVSNFIRPINDTLQTMPLFVILIPF 542

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E  +  AI    +  +       L N+P ++ E +++   +  Q 
Sbjct: 543 LMFFQIG--------EFTSFLAIVAYAIVPVIRYTEHGLRNVPTEVVEAAQAMGCTRRQL 594

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  ++      +V          ++   G+G  + +A+   D  
Sbjct: 595 LWEVKMPLAIPEIMLGLNQTVMFALAMLVI-------TALVGSRGLGQSVYIALSAADAG 647

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             + A L M  +  + D+++
Sbjct: 648 KGIVAGLGMALIAIIADRII 667



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 89/282 (31%), Gaps = 18/282 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              ++I      F +      + +   L             L      +    I +    
Sbjct: 34  PIDQWINLFMGWFIASFKWLFRSINWVLAWPMDVAQALLQWLPWPATTTLFCVIAYIASS 93

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             +A+  A+     ++  +              T+  V+V I +A  +   + +      
Sbjct: 94  WRLAVFTAFAMFYMVITGYWLP--------SMNTLGMVLVSIPLAIGVGFGMAVAAYKSR 145

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            I++ IQP   L+   P   +   ++    +  +   +  ++         +  N+I G 
Sbjct: 146 RINAIIQPTLDLMQTVPTFAYLIPILLLFGFGPVVGVVASAIYAC----PPMARNMILGL 201

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E       T  + + ++ +P   P  + G       A +  I++ +      
Sbjct: 202 QKVPPEVLEAGLMSGSTRRQQFWWVRVPSALPNIMIGVNQTTMAALSMVIIAAIIGSSAD 261

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                 +G  +  +  K  F + +L  +++    + L+R  W
Sbjct: 262 ------IGWEVLSTMRKAQFGQSLLAGIVIALIAMVLDRVSW 297


>gi|254512933|ref|ZP_05124999.1| glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein [Rhodobacteraceae bacterium KLH11]
 gi|221532932|gb|EEE35927.1| glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein [Rhodobacteraceae bacterium KLH11]
          Length = 531

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 85/233 (36%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +V+ +  +L   +    V           L    L + +  T   + +   + +L    
Sbjct: 303 PVVMFVTVVLAFRLAGPRVAI-FTAASLAYLAFMGLWELSMITVALIGAGAFLCVLIGIP 361

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                 KS+R      P+LD MQ++P   +L   + +F    P  V+        A    
Sbjct: 362 LGIWFGKSKRAYAFAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVL--------ATLVF 413

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P   +E + +F  S  Q  + + +P ++P ++  +  ++     
Sbjct: 414 AMPPVIRLTALGMRGVPETTKEAAIAFGCSKRQLLFNVELPLALPSIMTGINQTILMSLS 473

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I          G+G+ I  A++       L   L +L    + D++
Sbjct: 474 MVVIASLI-------GAEGLGALILEALQYAAKGQGLLGGLAILFCAMVIDRI 519



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 110/328 (33%), Gaps = 15/328 (4%)

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +LGV+ ++   L R  +   ++F  + T G+      +        +  ++      
Sbjct: 207 VFGLLGVLAIWPLTLIRFTVANPDQFVAKLTGGLLGDRISITEFPIGREYFAYLSQKGDA 266

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F  L+NN   +   +           L       +     +  F  V         +  
Sbjct: 267 GFDWLANNFGDVFDGVTA----GIRWVLDGLEILLIQTPWPVVMFVTVVLAFRLAGPRVA 322

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +      Y   + +  L  IT+  +     +  +I IP+GIW G      +  +P    
Sbjct: 323 IFTAASLAYLAFMGLWELSMITVALIGAGAFLCVLIGIPLGIWFGKSKRAYAFAEPVLDF 382

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA V+   +++          L   +         ++     G    P   KE A 
Sbjct: 383 MQTMPAFVYLIPIIAFFGTGKPPGVLATLVF----AMPPVIRLTALGMRGVPETTKEAAI 438

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F  +  +    + LP   P  +TG       + +  +++ +           GLGA I 
Sbjct: 439 AFGCSKRQLLFNVELPLALPSIMTGINQTILMSLSMVVIASLIG-------AEGLGALIL 491

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           E+ +  +  + +LG L +    + ++R 
Sbjct: 492 EALQYAAKGQGLLGGLAILFCAMVIDRI 519


>gi|53717242|ref|YP_105326.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Burkholderia mallei ATCC 23344]
 gi|53722452|ref|YP_111437.1| glycine-betaine binding ABC transporter permease protein
           [Burkholderia pseudomallei K96243]
 gi|76817460|ref|YP_335608.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|124381826|ref|YP_001024716.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126444044|ref|YP_001063021.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|126447053|ref|YP_001079051.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|126457380|ref|YP_001075966.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|134282424|ref|ZP_01769128.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167724046|ref|ZP_02407282.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei DM98]
 gi|167820188|ref|ZP_02451868.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 91]
 gi|167828563|ref|ZP_02460034.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 9]
 gi|167850021|ref|ZP_02475529.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei B7210]
 gi|167898630|ref|ZP_02486031.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 7894]
 gi|167906971|ref|ZP_02494176.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167915330|ref|ZP_02502421.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 112]
 gi|167923164|ref|ZP_02510255.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
 gi|217425333|ref|ZP_03456827.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|226199143|ref|ZP_03794705.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237509601|ref|ZP_04522316.1| choline ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242313507|ref|ZP_04812524.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254174383|ref|ZP_04881045.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|254186743|ref|ZP_04893259.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194352|ref|ZP_04900784.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|254204020|ref|ZP_04910379.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254208998|ref|ZP_04915345.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254262955|ref|ZP_04953820.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254355725|ref|ZP_04972005.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|52212866|emb|CAH38900.1| putative glycine-betaine binding ABC transporter permease protein
           [Burkholderia pseudomallei K96243]
 gi|52423212|gb|AAU46782.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Burkholderia mallei ATCC 23344]
 gi|76581933|gb|ABA51407.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|124289846|gb|ABM99115.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126223535|gb|ABN87040.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126231148|gb|ABN94561.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|126239907|gb|ABO03019.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|134245981|gb|EBA46071.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|147744904|gb|EDK51985.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147750221|gb|EDK57291.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148023818|gb|EDK82880.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|157934427|gb|EDO90097.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160695429|gb|EDP85399.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|169651103|gb|EDS83796.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|217391584|gb|EEC31612.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|225928918|gb|EEH24943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|235001806|gb|EEP51230.1| choline ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242136746|gb|EES23149.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254213957|gb|EET03342.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 300

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +   C +      + W+   +                  +T+   +   I++ ++ IP
Sbjct: 49  MWLMMACFIGVGLWRVGWRFAFFTAASLFLIFATGFWDQTVVTLGLTLSSTIVSLVLGIP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW      +++ ++P   L+   PA V+            +   L   +  +      
Sbjct: 109 LGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G      +  E   +F  T W+    +  P   P  + G       A +  I+
Sbjct: 169 ----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVII 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 225 ASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|292655752|ref|YP_003535649.1| putative sulfonate ABC transporter permease [Haloferax volcanii
           DS2]
 gi|291372837|gb|ADE05064.1| ABC-type transport system permease protein (probable substrate
           sulfonate) [Haloferax volcanii DS2]
          Length = 289

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 12/191 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++  V  ++I + + +  GI +G+   + S   P  +LL   P   +    V  +   H
Sbjct: 100 SLYHYVPGLLIGTSLGVFAGIAMGWNTRVDSVFTPVTRLLRPIPPLAWIGFAVIWLGVNH 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504
                  + ++  G+ W   ++   G      D KEVA++  +   W   R +++P   P
Sbjct: 160 QG----ATFIVAIGSFWINFYSAYGGVEGVSEDLKEVAATLGVDDDWTMIRKVVIPAASP 215

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG  T+ G  W   + +E+           G+G  I  + +  +    V  +L++  
Sbjct: 216 SIMTGIRTSIGQCWMIVVAAELIVG-------VGVGYEILNTAQNLAMDVSVAYMLVISI 268

Query: 565 FVLALNRFLWH 575
             L  +     
Sbjct: 269 VFLVSDGLFRR 279



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 99/275 (36%), Gaps = 30/275 (10%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI-----LLHGIQETTVPRDIVDIVPITL 56
            L + L  F S R    +     F+ V  +  +     LL    E      +    P +L
Sbjct: 20  RLLDRLAGFSSERAGLAVAGFAGFLAVWHVAALFQPTYLLPSPVEVLAAFVVELTAPASL 79

Query: 57  DV---------HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
            +           L     ++    +  ++I              + R+  V  P+  ++
Sbjct: 80  SIPFTGAELPATRLLVKLVQSLYHYVPGLLIGTSLGVFAGIAMGWNTRVDSVFTPVTRLL 139

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP L ++ F V++    + G        A F +     W   +S Y  +  +  DL+E
Sbjct: 140 RPIPPLAWIGFAVIWLGVNHQG--------ATFIVAIGSFWINFYSAYGGVEGVSEDLKE 191

Query: 168 VSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           V+ +  +   W     + +P + P ++  +  S+   W  VVA+E+IV         G+G
Sbjct: 192 VAATLGVDDDWTMIRKVVIPAASPSIMTGIRTSIGQCWMIVVAAELIVG-------VGVG 244

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             I    +   +   +  ML +  V  + D L  R
Sbjct: 245 YEILNTAQNLAMDVSVAYMLVISIVFLVSDGLFRR 279


>gi|199597436|ref|ZP_03210866.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus rhamnosus
           HN001]
 gi|258509142|ref|YP_003171893.1| ABC transporter binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus GG]
 gi|199591696|gb|EDY99772.1| Putative glycine/betaine/carnitine ABC transporter,
           membrane-spanning subunit [Lactobacillus rhamnosus
           HN001]
 gi|257149069|emb|CAR88042.1| ABC transporter, binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus GG]
 gi|259650429|dbj|BAI42591.1| glycine/betaine/carnitine ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 283

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSA 75
           +FD +   L I +I  L   ++     R ++    + L +       +  ++T   +L+A
Sbjct: 48  VFDFIPIWLFIILIMALTWYLKRGQKYRSLLIFELVGLLLIWNLGFWRDMTQTLTLVLTA 107

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +++++        AA+S+ +  ++ P++D MQ++P   +L   V +F     G V G  
Sbjct: 108 SLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVV 164

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P DL E + +F  + WQ+   + +PF+   ++  
Sbjct: 165 ASVIFAMP-----PTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKVQLPFARGTIMAG 219

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D      A L ++ +  + 
Sbjct: 220 INQSMMLALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIIL 272

Query: 256 DQL 258
           D++
Sbjct: 273 DRI 275



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
             ++  I    +   +  G  ++S+  + +        L        T+  V+   ++A 
Sbjct: 53  PIWLFIILIMALTWYLKRGQKYRSLLIFELVGLLLIWNLGFWRDMTQTLTLVLTASLLAI 112

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GIW      +S+ ++P    +   PA V+    V+      +   +   +    
Sbjct: 113 VIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF--- 169

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                 +     G    P D  E A +F  T W+    + LP      + G   +   A 
Sbjct: 170 -AMPPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKVQLPFARGTIMAGINQSMMLAL 228

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +           GLG  +  +  +       +  L +    + L+R 
Sbjct: 229 SMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 275


>gi|329929493|ref|ZP_08283227.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328936381|gb|EGG32828.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 287

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 23/253 (9%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ------YASRTTLRMLSAMVISLL 81
           V+ +    L G         +     I   + +L        +   +  R  +   +   
Sbjct: 48  VLVLAIWQLAGNLGWIDAFFLPTPAAIFESLWNLIASGKMATHLGISIGRAAAGFALGGS 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  L   SR+  + L P + +++ IP L      +++F      KV+     A F 
Sbjct: 108 LGLIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFF- 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  + ++ + L EVSR  + S  Q+   L +P S+P L+  + +S++
Sbjct: 167 -------PLYVNTFLGIRSVDKKLFEVSRVLQYSRVQQMIKLIIPSSLPNLLMGLRLSLA 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  +V +E+I          G+G  I LA +      I   +L    V  + D     
Sbjct: 220 VSWLGLVVAELIG------SQSGVGFLINLAKQSSLTEQIFVGVLVFAVVGMMVDLFVRS 273

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W + ++
Sbjct: 274 LERRLLKWRDSYK 286



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 73/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R      +   + +  G+  GF       + P  Q+L   P     PL++    +
Sbjct: 92  GISIGRAAAGFALGGSLGLIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGF 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      L++  G  + +  N   G  +      EV+     +  +    +I+P   
Sbjct: 152 GETSK----VLIIAKGAFFPLYVNTFLGIRSVDKKLFEVSRVLQYSRVQQMIKLIIPSSL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   +   +W   +V+E+          +G+G  I  + +     ++ +GVL+  
Sbjct: 208 PNLLMGLRLSLAVSWLGLVVAELIG------SQSGVGFLINLAKQSSLTEQIFVGVLVFA 261

Query: 564 CFVLALNRFLW---HPLYLY 580
              + ++ F+      L  +
Sbjct: 262 VVGMMVDLFVRSLERRLLKW 281


>gi|327480609|gb|AEA83919.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 292

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 12/253 (4%)

Query: 307 SPLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           +P++     + R +   IR         L +   +S    ++W     G+A  +   S G
Sbjct: 21  APVARAEPAVRRGSFWRIRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPG 80

Query: 366 YIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++     +     ++    I+++RV+     +++I +P+G++IG    + + ++P    
Sbjct: 81  AVLERIGRWWTSEGLLGDIGISVWRVMAGFGASALIALPLGLYIGTYRPVQAFLEPLTDF 140

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA  F PLV+  V     +      L++  GT + ++  V       P    E A 
Sbjct: 141 IRYMPAVAFIPLVMLWVGIDEGSK----VLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQ 196

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +         + +ILP   P  +      CG AW   +V+E+ +        +GLG  I 
Sbjct: 197 TMGANRSEIVKLVILPSAKPALLDTLRITCGWAWTYLVVAELVA------ANSGLGYAIL 250

Query: 545 ESTEKGSFPEVVL 557
           ++       ++  
Sbjct: 251 KAQRYMHTDKIFA 263



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++ +        L      +  R+++    S L            R +   L 
Sbjct: 76  MPSPGAVLERIGRWWTSEGLLGDIGISVWRVMAGFGASALIALPLGLYIGTYRPVQAFLE 135

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+ D ++ +P + F+   +++       KV+         IF    + M   + + +  +
Sbjct: 136 PLTDFIRYMPAVAFIPLVMLWVGIDEGSKVL--------IIFIGTFFQMVLMVAEDVRRV 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P    E +++   +  +    + +P + P L+  + ++    W ++V +E++        
Sbjct: 188 PMAQIEAAQTMGANRSEIVKLVILPSAKPALLDTLRITCGWAWTYLVVAELVAANS---- 243

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +      I   +L +  +  + DQ  
Sbjct: 244 --GLGYAILKAQRYMHTDKIFAGILLIGLIGLITDQAF 279


>gi|323490330|ref|ZP_08095545.1| glycine betaine ABC transporter permease [Planococcus donghaensis
           MPA1U2]
 gi|323396000|gb|EGA88831.1| glycine betaine ABC transporter permease [Planococcus donghaensis
           MPA1U2]
          Length = 276

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L + A +T   ++ + +IS++       LAA ++ +  ++ PILD MQ++P   +
Sbjct: 81  LGSVELWEAAMQTVAIVIVSTLISVIIGIPVGILAATNKTMANIVRPILDFMQTLPSFVY 140

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++ F            + A+ A F              +  +P D+ E S++F  +
Sbjct: 141 LIPAILLFGLG--------NVPAVIATFVFATPPAVRMTTLGILQVPADVVEASKAFGST 192

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ  + + +P +MP ++  +  +M       V + MI         PG+GS +   I  
Sbjct: 193 KWQLLYKVQLPLAMPSIMAGINQTMMLALSMAVIASMI-------GAPGLGSVVLEGIST 245

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            ++   L   L ++ +  + D++
Sbjct: 246 VNVGLGLTGGLGIVVLAIVMDRI 268



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 11/227 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +    +V             +++    Y   + +      T+  V+V  +I+ II IPVG
Sbjct: 53  VLVLILVLIAWKFSGKGLALFVLLGSLYLGSVELWEAAMQTVAIVIVSTLISVIIGIPVG 112

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I       +++ ++P    +   P+ V+    +          N+   +          +
Sbjct: 113 ILAATNKTMANIVRPILDFMQTLPSFVYLIPAILLFGLG----NVPAVIATFVFATPPAV 168

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P D  E + +F  T W+    + LP   P  + G       A + ++++ 
Sbjct: 169 RMTTLGILQVPADVVEASKAFGSTKWQLLYKVQLPLAMPSIMAGINQTMMLALSMAVIAS 228

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +           GLG+ + E     +    + G L +    + ++R 
Sbjct: 229 MIG-------APGLGSVVLEGISTVNVGLGLTGGLGIVVLAIVMDRI 268


>gi|261409048|ref|YP_003245289.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261285511|gb|ACX67482.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 277

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 21/236 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLF 82
            F++++ +I  LL  +     P  +   +   L D          T   +++A +IS++ 
Sbjct: 50  LFIVILAVIAYLLGRL-----PLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVIL 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA S+    V++P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 105 GVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +  +L E + +F  +  QK + + +P +MP L+  +  ++  
Sbjct: 162 P-----PTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIML 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          GIG+ +  A+ +  +     A L ++ +  + D+ 
Sbjct: 217 SLSMVVIASMI-------GAQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 13/228 (5%)

Query: 347 FWFCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           + F V+  V   +        +    F   D L        T+  V+   +I+ I+ +P+
Sbjct: 49  YLFIVILAVIAYLLGRLPLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVILGVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW  +    S  I P    +   PA V+    V+  S   +   +   +  I       
Sbjct: 109 GIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAI----PPT 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G       + +  +++
Sbjct: 165 IRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIMLSLSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           G+GA +  +  +    +     L +    + L+RF
Sbjct: 225 SMIG-------AQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265


>gi|126737512|ref|ZP_01753242.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseobacter sp. SK209-2-6]
 gi|126720905|gb|EBA17609.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseobacter sp. SK209-2-6]
          Length = 519

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 88/240 (36%), Gaps = 21/240 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++ FV V+  + +    +   T            L    L + A  T   + +   +
Sbjct: 289 PWPVVMFVTVVMALRLAGPRVAIFTAAS------LAYLAFMGLWELAMITVALIGAGAFL 342

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +           KS+R   +  P+LD MQ++P   +L   + +F    P  V+      
Sbjct: 343 CVAIGIPLGIWFGKSKRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVL------ 396

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A     +  +       +  +P   +E + +F  S  Q  + + +P ++P ++  +  
Sbjct: 397 --ATLVFAMPPVIRLTALGMRGVPEATKEAAVAFGCSRRQLLFNVELPLALPSIMTGINQ 454

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      VV + +I          G+G+ I  A++       L   L +L    + D++
Sbjct: 455 TILMSLSMVVIASLI-------GAEGLGALILEALQYAAKGQGLLGGLAILFCAMVIDRI 507



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 78/229 (34%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +  F  V         +   +      Y   + +  L  IT+  +     +   I IP
Sbjct: 290 WPVVMFVTVVMALRLAGPRVAIFTAASLAYLAFMGLWELAMITVALIGAGAFLCVAIGIP 349

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW G      +  +P    +   PA V+   +++          L   +         
Sbjct: 350 LGIWFGKSKRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLVF----AMPP 405

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P   KE A +F  +  +    + LP   P  +TG       + +  ++
Sbjct: 406 VIRLTALGMRGVPEATKEAAVAFGCSRRQLLFNVELPLALPSIMTGINQTILMSLSMVVI 465

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLGA I E+ +  +  + +LG L +    + ++R 
Sbjct: 466 ASLIG-------AEGLGALILEALQYAAKGQGLLGGLAILFCAMVIDRI 507


>gi|219669661|ref|YP_002460096.1| ABC transporter inner membrane protein [Desulfitobacterium
           hafniense DCB-2]
 gi|219539921|gb|ACL21660.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 252

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR+ V + I   + +P+G++IG        I P    L   P   + P+ +  +    
Sbjct: 62  SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFILWLGIGE 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    LM++   + +  N + G  +     KEVA +F +       ++ LP   P+
Sbjct: 122 A----MKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARITHVYLPSAAPH 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G        W A + +E+ +       + GLG  + E         + + + I+   
Sbjct: 178 FFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEGRNLAQAELIFVSIFIIGSL 231

Query: 566 VLALN 570
              ++
Sbjct: 232 GALID 236



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+I   +F  L  +L  G+             P DI+      L    +  +   +  R+
Sbjct: 7   RKIHGLVFPALLIILWQGVSYFGWVNPYLLPSPGDIIGAFTELLFTGEIFTHIKSSLFRL 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              M I++              R    + P L  +Q IP + ++   +++          
Sbjct: 67  GVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFILWLGIG------ 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I  +  +  + +  +    + ++ + L+EV+++F L    +  ++ +P + P  
Sbjct: 121 --EAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARITHVYLPSAAPHF 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +  S  W  +VA+E+I          G+G  +           I  ++  +  + 
Sbjct: 179 FVGIRLGFSNCWRALVAAEIIASSK------GLGYLLMEGRNLAQAELIFVSIFIIGSLG 232

Query: 253 FLYD 256
            L D
Sbjct: 233 ALID 236


>gi|222081695|ref|YP_002541060.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726374|gb|ACM29463.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 277

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 96/268 (35%), Gaps = 14/268 (5%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG---- 365
           + ++++        +       ++L S +R++  L I     +  V+  +  + +     
Sbjct: 4   TRSIEQALDRPADPQIGGQGRKVRLGSLRRLASPLAILVLWQLLSVSGLLPPRILASPVQ 63

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +           ++    ++  RV V   IA ++ + +G+  G      + I P  Q+L
Sbjct: 64  ILAAGAKLTASGELVIGLGVSFLRVAVGFSIALVVGVLLGLISGLSRFGETMIDPPIQML 123

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P     PL +           +    ++ FG  + I   +  G         E   +
Sbjct: 124 KAMPFLGLLPLFILWFGIG----EVPKVGMVAFGCVFPIYLTLHGGIRGIDRKLIEAGKT 179

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +      R+I++PG  P  + G       AW + +V E  +       ++G+G  +  
Sbjct: 180 LGLGTLGIVRHIVIPGALPSLLVGVRYGLSVAWLSLVVGEQIN------ASSGIGYIMTY 233

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +      +V+ +L+     L  +  +
Sbjct: 234 ARDFLQTDVIVVCLLVYAAMGLLTDGLV 261



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 100/259 (38%), Gaps = 17/259 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S R   +   +L    ++ +  +L   I     P  I+           L      + LR
Sbjct: 30  SLRRLASPLAILVLWQLLSVSGLLPPRI--LASPVQILAAGAKLTASGELVIGLGVSFLR 87

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     I+L+   +   ++  SR    ++ P + +++++P LG L   +++F        
Sbjct: 88  VAVGFSIALVVGVLLGLISGLSRFGETMIDPPIQMLKAMPFLGLLPLFILWFGIG----- 142

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E+  +  +    V+ +  +++  +  I R L E  ++  L       ++ +P ++P 
Sbjct: 143 ---EVPKVGMVAFGCVFPIYLTLHGGIRGIDRKLIEAGKTLGLGTLGIVRHIVIPGALPS 199

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  +   +S  W  +V  E I          GIG  +  A        I+  +L    +
Sbjct: 200 LLVGVRYGLSVAWLSLVVGEQINASS------GIGYIMTYARDFLQTDVIVVCLLVYAAM 253

Query: 252 IFLYDQLLFRPMIVWSNKF 270
             L D L+ R +  ++ ++
Sbjct: 254 GLLTDGLV-RIIEAYALRW 271


>gi|33592074|ref|NP_879718.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis Tohama I]
 gi|33571718|emb|CAE41217.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|332381490|gb|AEE66337.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella pertussis CS]
          Length = 290

 Score =  113 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 9/201 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   +      +++R +   +++ +I IP+G  +G  P +     P   ++   PA  +
Sbjct: 78  PEQGMLFKHIGASLYRAISAFLLSVLIGIPLGFCLGLMPSVHKWTSPILSVMLPLPAVAW 137

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++             +  +   G  + +L++ I G  A       V  S        
Sbjct: 138 TPILLVAFGQGDRT----IITVCFLGAFFPVLYSTIQGVKAVSKQSIWVVRSMGGKRRHV 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  ++G       +W   + +E+ +       +TGLG  I  +       
Sbjct: 194 LLNVLLPSCLPALISGLKLGMAHSWRTLVAAEMLA-----AISTGLGYMIFAARSYMDVS 248

Query: 554 EVVLGVLIMCCFVLALNRFLW 574
            + +G+ ++    +A+   ++
Sbjct: 249 TMFVGIALLALIGMAIEYGIF 269



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 13/236 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F +  G I   +         R    +     +   L ++   +  R +SA ++S+L   
Sbjct: 47  FAVRAGWIASNIFPSPSMIFARASEQLFSTGPEQGMLFKHIGASLYRAISAFLLSVLIGI 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                      +     PIL +M  +P + +    +V F           +   I   F 
Sbjct: 107 PLGFCLGLMPSVHKWTSPILSVMLPLPAVAWTPILLVAFGQG--------DRTIITVCFL 158

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + + +S  Q +  + +    V RS           + +P  +P L+  + + M+  W
Sbjct: 159 GAFFPVLYSTIQGVKAVSKQSIWVVRSMGGKRRHVLLNVLLPSCLPALISGLKLGMAHSW 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             +VA+EM+    T     G+G  I  A    D+  +   +  +  +    +  +F
Sbjct: 219 RTLVAAEMLAAIST-----GLGYMIFAARSYMDVSTMFVGIALLALIGMAIEYGIF 269


>gi|229553043|ref|ZP_04441768.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258540345|ref|YP_003174844.1| ABC transporter binding-protein-dependent transporter permease
           [Lactobacillus rhamnosus Lc 705]
 gi|229313540|gb|EEN79513.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257152021|emb|CAR90993.1| ABC transporter, binding-protein-dependent transporter
           permeasecomponent [Lactobacillus rhamnosus Lc 705]
          Length = 283

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 105/243 (43%), Gaps = 18/243 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSA 75
           IFD +   L I +I  L   ++     R ++    + L +       +  ++T   +L+A
Sbjct: 48  IFDFIPIWLFIILIMALTWYLKRGQKYRSLLIFELVGLLLIWNLGFWRDMTQTLTLVLTA 107

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +++++        AA+S+ +  ++ P++D MQ++P   +L   V +F     G V G  
Sbjct: 108 SLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVV 164

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + IFA+               +  +P DL E + +F  + WQ+   + +PF+   ++  
Sbjct: 165 ASVIFAMP-----PTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKVQLPFARGTIMAG 219

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      VV + MI          G+G+ +  A+   D      A L ++ +  + 
Sbjct: 220 INQSMMLALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIIL 272

Query: 256 DQL 258
           D++
Sbjct: 273 DRI 275



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
             ++  I    +   +  G  ++S+  + +        L        T+  V+   ++A 
Sbjct: 53  PIWLFIILIMALTWYLKRGQKYRSLLIFELVGLLLIWNLGFWRDMTQTLTLVLTASLLAI 112

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GIW      +S+ ++P    +   PA V+    V+      +   +   +    
Sbjct: 113 VIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF--- 169

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                 +     G    P D  E A +F  T W+    + LP      + G   +   A 
Sbjct: 170 -AMPPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKVQLPFARGTIMAGINQSMMLAL 228

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +           GLG  +  +  +       +  L +    + L+R 
Sbjct: 229 SMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 275


>gi|222086916|ref|YP_002545450.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221724364|gb|ACM27520.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 279

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 24/272 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-------- 378
            P        +     +  +    V+  +A   +  S  ++ +  T    LY        
Sbjct: 18  VPATKNSSSGSTLWISLATVLALLVIWAIAAAYSVVSPVFLPSPLTVAKALYALNVTGFV 77

Query: 379 ---VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     ++ R+   + ++ +I IP G+ I         + P  + L   P   + P
Sbjct: 78  DSTLLEHAFASLLRIFGGLAVSLVIGIPAGLAIASSRVGKGILDPIVEFLRPLPPLAYLP 137

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LV+  V     +       ++       I+ +  AG  A P D+   A SF     +  R
Sbjct: 138 LVIIWVGIGEASK----ITVIALAMLPPIILSTAAGVKAAPVDYVNAARSFGAGRLQVLR 193

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILPG  P  +TG   A G  W+  + +E+ +       + GLG  I  + +      V
Sbjct: 194 HVILPGAIPSILTGIRIALGAGWSTLVAAELVA------ASQGLGFMIQSAAQFLVTDIV 247

Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLYGTRC 584
           + G++++           R +   L  +    
Sbjct: 248 ISGIIVIALIAFVFEITVRLIERRLVPWSAHR 279



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 110/261 (42%), Gaps = 22/261 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++ ++  +LA +++  I                TV + +  +        +L ++A  + 
Sbjct: 30  LWISLATVLALLVIWAIAAAYSVVSPVFLPSPLTVAKALYALNVTGFVDSTLLEHAFASL 89

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR+   + +SL+         A SR    +L PI++ ++ +P L +L   +++       
Sbjct: 90  LRIFGGLAVSLVIGIPAGLAIASSRVGKGILDPIVEFLRPLPPLAYLPLVIIWVGIG--- 146

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E + I  I  + +  +  S    +   P D    +RSF     Q   ++ +P ++
Sbjct: 147 -----EASKITVIALAMLPPIILSTAAGVKAAPVDYVNAARSFGAGRLQVLRHVILPGAI 201

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + +++  GW  +VA+E++          G+G  I  A +      ++  ++ + 
Sbjct: 202 PSILTGIRIALGAGWSTLVAAELVAASQ------GLGFMIQSAAQFLVTDIVISGIIVIA 255

Query: 250 GVIFLY---DQLLFRPMIVWS 267
            + F++    +L+ R ++ WS
Sbjct: 256 LIAFVFEITVRLIERRLVPWS 276


>gi|209546619|ref|YP_002278537.1| aliphatic sulfonate ABC transporter permease [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537863|gb|ACI57797.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 283

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R       A +I IP+G+++G    +   + P  QL     A   +P+ +  +  
Sbjct: 89  AISLQRAGTAFAFAVVIGIPLGLFMGQVRAVEQALDPILQLFRQTSALALYPIFILLLGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++ + T + +L   I G         E+A ++       +R +ILP   
Sbjct: 149 GETSK----IFVIFWATLFPVLLATIGGVKEVDQKLIEMARTYGAGPLTVFRRVILPASV 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P    G   +   A    I +E+           G+G  +  +      P + 
Sbjct: 205 PAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQVMNAQYNFQIPLMF 251



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 83/229 (36%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
             P    LLAF+    + +           P ++ +  +   L   +L    + +  R  
Sbjct: 37  FLPRYGLLLAFLAFWQVSSTEGWINPAIFPPLNVILSALWTNLANGALLDDIAISLQRAG 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 97  TAFAFAVVIGIPLGLFMGQVRAVEQALDPILQLFRQTSALALYPIFILLLGLG------- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  +    +  + + L E++R++       F  + +P S+P + 
Sbjct: 150 -ETSKIFVIFWATLFPVLLATIGGVKEVDQKLIEMARTYGAGPLTVFRRVILPASVPAIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 209 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 251


>gi|153953665|ref|YP_001394430.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219854287|ref|YP_002471409.1| hypothetical protein CKR_0944 [Clostridium kluyveri NBRC 12016]
 gi|146346546|gb|EDK33082.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219568011|dbj|BAH05995.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 356

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +     ++++RV++ + IA +I +P+   +G +   I+    P  ++L+   +    P+ 
Sbjct: 61  LFIHIMVSLWRVLIGLSIAIVISVPLSFLLGGWFTGIADIFDPLFRILSQVNSFSLMPIF 120

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             ++ + I    W +L+N I+G         + A S  I      R +
Sbjct: 121 ILFFGIGEGAKLAVVTWVCI----WPLLYNTISGVRRVDPILIKTALSMKINNLDMARKV 176

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P    G       ++   I +E+         T G+G     S      P +  
Sbjct: 177 LLPGAKPSIFLGLRLGVEMSFFMLIAAEMIG------ATAGVGWLFHNSAMNNQIPRMYA 230

Query: 558 GVLIMCCFVLALNRFL 573
             + +    + LNRFL
Sbjct: 231 AGICVVILGIILNRFL 246



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 87/242 (35%), Gaps = 16/242 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVI 78
             +  F+L+  +         +   P   V      L  H+ L  +   +  R+L  + I
Sbjct: 19  LGVAIFLLLWEVFPKFGVLDSQFVPPLSKVLEQVYNLWFHNGLFIHIMVSLWRVLIGLSI 78

Query: 79  SLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++ +   + L       +  +  P+  I+  +     +   +++F      K+      
Sbjct: 79  AIVISVPLSFLLGGWFTGIADIFDPLFRILSQVNSFSLMPIFILFFGIGEGAKLAVVTWV 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I        W + ++    +  +   L + + S +++       + +P + P +   + 
Sbjct: 139 CI--------WPLLYNTISGVRRVDPILIKTALSMKINNLDMARKVLLPGAKPSIFLGLR 190

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +   +F ++A+EMI          G+G     +     +  +  A + ++ +  + ++
Sbjct: 191 LGVEMSFFMLIAAEMIG------ATAGVGWLFHNSAMNNQIPRMYAAGICVVILGIILNR 244

Query: 258 LL 259
            L
Sbjct: 245 FL 246


>gi|116694836|ref|YP_729047.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113529335|emb|CAJ95682.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 291

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M RV     +A +  +PVG+ +G          P  +     P   + PL+V     
Sbjct: 98  AASMMRVFGAFGLAVVTAVPVGVMMGVSRIARGVFDPPIEFYRPLPPLAYLPLIVIWFGI 157

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  +  AG  +   +    A S   T W+  R++++P   
Sbjct: 158 DETSK----VLLIFLACFAPLAMSAQAGVRSVTIEQINAAYSMGATPWQVVRHVVIPAAL 213

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W   + +E+ +       T GLG  +  ++       V++G++++ 
Sbjct: 214 PDILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDVVIMGIVLIG 267

Query: 564 CFVLALNRFLWH 575
                 +  +  
Sbjct: 268 LIAYVFDLLMRK 279



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 91/212 (42%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++ + + +R+  A  ++++       +   SR    V  P ++  + +P L +L   V
Sbjct: 93  LTEHFAASMMRVFGAFGLAVVTAVPVGVMMGVSRIARGVFDPPIEFYRPLPPLAYLPLIV 152

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+         IF +    +  S    + ++  +    + S   + WQ  
Sbjct: 153 IWFGIDETSKVL--------LIFLACFAPLAMSAQAGVRSVTIEQINAAYSMGATPWQVV 204

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 205 RHVVIPAALPDILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDV 258

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           ++  ++ +  + +++D L   L + ++ W  +
Sbjct: 259 VIMGIVLIGLIAYVFDLLMRKLAKVLVPWKGR 290


>gi|192291272|ref|YP_001991877.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285021|gb|ACF01402.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 280

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 95/244 (38%), Gaps = 17/244 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +       +    P  +   +        L ++ + T  R+ +   + +L   +   +
Sbjct: 44  AAVYFGWSNGRLVPPPSRVFSTIAELARTGELTRHVAATLGRVAAGFGLGVLSGTLLGAV 103

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           A        +L P +  +++IP + ++   +++       KV    +   F ++      
Sbjct: 104 AGYWSLARRLLDPTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY------ 157

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
               +  ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA
Sbjct: 158 --LGVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVA 215

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVW 266
           +E +   +      G+G  +    +      I+ A++    +    D L+     P++ W
Sbjct: 216 AEFMGASE------GLGFLLVDGQQLGKPAQIVAAIVIFAVLGKTTDWLIEIATLPLLRW 269

Query: 267 SNKF 270
            + F
Sbjct: 270 QDAF 273



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T+ RV     +  +    +G   G+       + P  Q L A P+  + PL
Sbjct: 73  GELTRHVAATLGRVAAGFGLGVLSGTLLGAVAGYWSLARRLLDPTVQALRAIPSIAWVPL 132

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +  +  +       L+  G  + +   V+    +      EV  +F ++G    R 
Sbjct: 133 FILWLGIFETSK----VALIAVGVFFPVYLGVMGAIRSVDRKIVEVGRAFRLSGPAMIRR 188

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP + P YV       G  W   + +E          + GLG  + +  + G   ++V
Sbjct: 189 ILLPAVLPAYVLALRVGLGLGWMFVVAAEFMG------ASEGLGFLLVDGQQLGKPAQIV 242

Query: 557 LGVLIMCCFVLALNRFL 573
             ++I        +  +
Sbjct: 243 AAIVIFAVLGKTTDWLI 259


>gi|254449744|ref|ZP_05063181.1| glycine betaine/L-proline transport system permease protein
           [Octadecabacter antarcticus 238]
 gi|198264150|gb|EDY88420.1| glycine betaine/L-proline transport system permease protein
           [Octadecabacter antarcticus 238]
          Length = 447

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +V+ +I ++ + +    V           L    L + +  T   + +   + ++    
Sbjct: 218 PVVMFVIIVMAYRLAGPRVAI-FTAASLAYLAFMGLWELSMITVALIGAGAFLCIIIGIP 276

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                 KS R   +  PILD MQ++P   +L   + +F    P  V+        A    
Sbjct: 277 LGIWFGKSPRAYNIAEPILDFMQTMPAFVYLIPIIAFFGTGKPPGVL--------ATLIF 328

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P   +E + +F  S WQ    + +P ++P ++  +  ++     
Sbjct: 329 AMPPVIRLTALGMRGVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTGINQTILMSLS 388

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I          G+G+ I  A++       L   L +L    + D++
Sbjct: 389 MVVIASLI-------GAEGLGALILEALQYAAKGQGLLGGLAILLCAMVIDRI 434



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +  F ++         +   +      Y   + +  L  IT+  +     +  II IP
Sbjct: 217 WPVVMFVIIVMAYRLAGPRVAIFTAASLAYLAFMGLWELSMITVALIGAGAFLCIIIGIP 276

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW G  P   +  +P    +   PA V+   +++          L   +         
Sbjct: 277 LGIWFGKSPRAYNIAEPILDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIF----AMPP 332

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P   KE A++F  + W+    + LP   P  +TG       + +  ++
Sbjct: 333 VIRLTALGMRGVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTGINQTILMSLSMVVI 392

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLGA I E+ +  +  + +LG L +    + ++R 
Sbjct: 393 ASLIG-------AEGLGALILEALQYAAKGQGLLGGLAILLCAMVIDRI 434


>gi|206564248|ref|YP_002235011.1| putative glycine-betaine ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198040288|emb|CAR56273.1| putative glycine-betaine binding ABC transporter permease protein
           [Burkholderia cenocepacia J2315]
          Length = 298

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IG+    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGVGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|167743016|ref|ZP_02415790.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 14]
 gi|254183828|ref|ZP_04890420.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|184214361|gb|EDU11404.1| glycine betaine/L-proline ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
          Length = 300

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 12/228 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASIIWIPV 404
                   GV +        +      +       W    +T+   +   I++ ++ IP+
Sbjct: 50  WLMIACFIGVGLWRVGWRFAFFTAASLFLIFATGFWDQTVVTLGLTLSSTIVSLVLGIPL 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +++ ++P   L+   PA V+            +   L   +  +       
Sbjct: 110 GIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G      +  E   +F  T W+    +  P   P  + G       A +  I++
Sbjct: 169 ---TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|261404676|ref|YP_003240917.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261281139|gb|ACX63110.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 287

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 23/253 (9%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ------YASRTTLRMLSAMVISLL 81
           V+ +    L G         +     I   + +L        +   +  R  +   +   
Sbjct: 48  VLVLAIWQLAGNLGWIDAFFLPTPAAIFESLWNLIASGKMATHLGISIGRAAAGFALGGS 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  L   SR+  + L P + +++ IP L      +++F      KV+     A F 
Sbjct: 108 LGLIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFF- 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  + ++ + L EVSR  + S  Q+   L +P S+P L+  + +S++
Sbjct: 167 -------PLYVNTFLGIRSVDKKLFEVSRVLQYSRVQQIIKLIIPSSLPNLLMGLRLSLA 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  +V +E+I          G+G  I LA +      I   +L    V  + D     
Sbjct: 220 VSWLGLVVAELIG------SQSGVGFLINLAKQSSLTEQIFVGVLVFAVVGMMVDLFVRS 273

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W + ++
Sbjct: 274 LERRLLKWRDSYK 286



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 73/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R      +   + +  G+  GF       + P  Q+L   P     PL++    +
Sbjct: 92  GISIGRAAAGFALGGSLGLIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGF 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      L++  G  + +  N   G  +      EV+     +  +    +I+P   
Sbjct: 152 GETSK----VLIIAKGAFFPLYVNTFLGIRSVDKKLFEVSRVLQYSRVQQIIKLIIPSSL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   +   +W   +V+E+          +G+G  I  + +     ++ +GVL+  
Sbjct: 208 PNLLMGLRLSLAVSWLGLVVAELIG------SQSGVGFLINLAKQSSLTEQIFVGVLVFA 261

Query: 564 CFVLALNRFLW---HPLYLY 580
              + ++ F+      L  +
Sbjct: 262 VVGMMVDLFVRSLERRLLKW 281


>gi|78061306|ref|YP_371214.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77969191|gb|ABB10570.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 298

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IGI    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWMMMAIFIGIGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|258405766|ref|YP_003198508.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257797993|gb|ACV68930.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 259

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 92/214 (42%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  Y   +T R++    +++LF        A S+R   +  P+++  + +P++  +  
Sbjct: 59  GVLLAYTWASTYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPL 118

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T++YF           +      IF    + +   +  S+  +P DL   + +   S  Q
Sbjct: 119 TLLYFGIG--------DAQKFVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQ 170

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  +  P ++PG++ N+ +++   W ++V +E++          G+G  I  A +   +
Sbjct: 171 SYRLVLFPGALPGILDNLRITIGWAWTYLVVAELVAANS------GLGYMILRAQRFLAI 224

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             I   ++ +  +    D   +LL R ++ WS K
Sbjct: 225 DRIFAGLIIIGLLGLATDCLFKLLTRLVVPWSEK 258



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 10/181 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     + +RV+V   +A +  +P+G+ I      ++   P  +     P     PL
Sbjct: 59  GVLLAYTWASTYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +               +++  GT + ++  V+   +A P D    A++   +  + +R 
Sbjct: 119 TLLYFGIGDAQK----FVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQSYRL 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ PG  P  +       G AW   +V+E+ +        +GLG  I  +    +   + 
Sbjct: 175 VLFPGALPGILDNLRITIGWAWTYLVVAELVA------ANSGLGYMILRAQRFLAIDRIF 228

Query: 557 L 557
            
Sbjct: 229 A 229


>gi|304406597|ref|ZP_07388253.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304344655|gb|EFM10493.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 280

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              +++   ++      Q+  + P  I+      +    L ++   + +R     VI   
Sbjct: 41  AIILVLWQTLSTYGVISQQLFSSPLLILKQYISLIADGDLGRHLRISVVRASLGFVIGGG 100

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SRR+   + P + +++++P+L      +++F           EL+ +  
Sbjct: 101 SGLLLGLFVGMSRRVEEYVNPTVQMIRTVPLLAITPLFIMWFG--------FGELSKVLL 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  + +  + N+   L EVSR  + S +++   L +P ++P ++  + +S+S
Sbjct: 153 ISLGAFFPLYVNTFLGVRNVDAKLFEVSRVLQFSRYRQIVKLIIPAALPNILLGVRLSLS 212

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          G+G  I  A        +   +     V  L D   +L
Sbjct: 213 ISWLVLVVAELVG------AESGVGYMIQDARSFMQTDVVFVGITIFAAVGKLSDSLVRL 266

Query: 259 LFRPMIVWSNKFR 271
           L   ++ W + F+
Sbjct: 267 LEHRLLRWQDSFK 279



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R  +  +I     + +G+++G    +   + P  Q++   P     PL +    + 
Sbjct: 86  ISVVRASLGFVIGGGSGLLLGLFVGMSRRVEEYVNPTVQMIRTVPLLAITPLFIMWFGFG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      LL+  G  + +  N   G         EV+     + +R    +I+P   P
Sbjct: 146 ELSK----VLLISLGAFFPLYVNTFLGVRNVDAKLFEVSRVLQFSRYRQIVKLIIPAALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   +   +W   +V+E+          +G+G  I ++        V +G+ I   
Sbjct: 202 NILLGVRLSLSISWLVLVVAELVG------AESGVGYMIQDARSFMQTDVVFVGITIFAA 255

Query: 565 FVLALN---RFLWHPLYLY 580
                +   R L H L  +
Sbjct: 256 VGKLSDSLVRLLEHRLLRW 274


>gi|148557961|ref|YP_001257691.1| putative glycine betaine/L-proline ABC transporter permease
           [Brucella ovis ATCC 25840]
 gi|148369246|gb|ABQ62118.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ovis ATCC 25840]
          Length = 299

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 42  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 101

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V G     IF
Sbjct: 102 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 159 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 213

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G  +   I+  ++       L ++ +  + D++
Sbjct: 214 MLSLSMVVIASMIGAG-------GLGHTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 264



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 42  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 101

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 102 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 158

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 159 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 217

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 218 SMVVIASMIGAG-------GLGHTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 264


>gi|149188568|ref|ZP_01866860.1| putative permease [Vibrio shilonii AK1]
 gi|148837478|gb|EDL54423.1| putative permease [Vibrio shilonii AK1]
          Length = 297

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++GI+  L +    +      V I    +    +     RT   +L +  +++      
Sbjct: 65  LILGILVGLAYLASRSWKLSASVGIAFFLIGFFGMWDNTMRTMSIILVSTFVAIALGIPT 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             + A+S++   V+ PILDIMQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIIMAQSKKARAVITPILDIMQTMPAFVYLIPVVMLLG---IGKIPGVIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + ++  S  Q+ + + VP +MP ++  +  ++      
Sbjct: 179 --PVIRLTDLGIRLVDKEVLEAATAYGASPMQRLFGVQVPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRV 281



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S    I    V        +W+    +   F       +      TM  ++V   +A  
Sbjct: 60  SSPWWLILGILVGLAYLASRSWKLSASVGIAFFLIGFFGMWDNTMRTMSIILVSTFVAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP GI +       + I P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPTGIIMAQSKKARAVITPILDIMQTMPAFVYLIPVVMLLGIG----KIPGVIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A+++  +  +    + +P   P  + G       A  
Sbjct: 176 AIPPVIRLTDLGIRLVDKEVLEAATAYGASPMQRLFGVQVPLAMPNIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDR 280


>gi|311029848|ref|ZP_07707938.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus sp. m3-13]
          Length = 251

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 101/243 (41%), Gaps = 15/243 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             +  ++  ++ +++         P ++   +       +L      +  R+   + ++L
Sbjct: 11  FASLFIIWEVVVLIIGWSPAVMPKPSNVAVALYQGFMDKTLLYDLGASFKRLGVGLFLAL 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   +     AKS+     +  ++  +QS+P + +L   +++F           E A IF
Sbjct: 71  IIGTLLGIWLAKSKTADETVGTLVLALQSVPSIVWLPLAIIWFGFN--------ETAIIF 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +       MT +M   + ++P    + + +   SG + FW + +P S+P  V    ++ 
Sbjct: 123 IVTLGGTLVMTINMRMGIKSVPPLYIKAASTMGASGVEMFWKIILPASVPYAVTGARLAW 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  W  ++A+E++ +G      PG+G  +  A     +  +   ++ +  +  + D ++F
Sbjct: 183 AFAWRALMAAELLSMG------PGLGYTLKYAADFGQMSLVFGVIIIICVIGSVVDLVIF 236

Query: 261 RPM 263
           +  
Sbjct: 237 QRF 239



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 96/246 (39%), Gaps = 12/246 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--YVIWLGCITMFRVVVLIIIASIIW 401
           L I W  VV  +    A       V    YQ  +   +++    +  R+ V + +A II 
Sbjct: 14  LFIIWEVVVLIIGWSPAVMPKPSNVAVALYQGFMDKTLLYDLGASFKRLGVGLFLALIIG 73

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +GIW+         +      L + P+ V+ PL +    +        +  ++  G  
Sbjct: 74  TLLGIWLAKSKTADETVGTLVLALQSVPSIVWLPLAIIWFGF----NETAIIFIVTLGGT 129

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  N+  G  + P  + + AS+   +G   +  IILP   PY VTGA  A   AW A 
Sbjct: 130 LVMTINMRMGIKSVPPLYIKAASTMGASGVEMFWKIILPASVPYAVTGARLAWAFAWRAL 189

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           + +E+ S G       GLG  +  + + G    V   ++I+C     ++  ++       
Sbjct: 190 MAAELLSMG------PGLGYTLKYAADFGQMSLVFGVIIIICVIGSVVDLVIFQRFEKNV 243

Query: 582 TRCLRL 587
            +   L
Sbjct: 244 IKRWGL 249


>gi|315647776|ref|ZP_07900877.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315276422|gb|EFU39765.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 286

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 16/254 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
                FL   +N  + +M+ +    V            I        + +++++   G  
Sbjct: 23  RIDRRFLIKFTNALIGWMVPLVIVMVWQAAGALGWLNPILLPTPLAIWNELVHLTSTGEL 82

Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                I+ +R ++  ++   + +  GIW+GF       + P  Q+L   P     PL + 
Sbjct: 83  IQHLGISSWRALLGFLLGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFIL 142

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              +   +      LL+  G+ + +  N   G  +  N   +VA     + W   R +I+
Sbjct: 143 WFGFGETSK----ILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDLIRRLIV 198

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P    G   + G AW   +V+E+         ++G+G  I ++        V +G+
Sbjct: 199 PASLPNIFLGIRLSIGVAWLGLVVAELMG------SSSGIGYIINDARSFSWTTVVFVGI 252

Query: 560 LIMCCFVLALNRFL 573
           ++        +  +
Sbjct: 253 IVFALVGKLSDSLV 266



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 97/277 (35%), Gaps = 25/277 (9%)

Query: 6   ILPPFISRRIFPNIFDLL--AFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLD 57
                I RR      + L    V ++ ++     G      P  +   + I         
Sbjct: 19  RRQKRIDRRFLIKFTNALIGWMVPLVIVMVWQAAGALGWLNPILLPTPLAIWNELVHLTS 78

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q+   ++ R L   ++              S +   ++ P L +++++P L    
Sbjct: 79  TGELIQHLGISSWRALLGFLLGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAIAP 138

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F           E + I  I     + +  + +  + ++   L +V+R  + S W
Sbjct: 139 LFILWFG--------FGETSKILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRW 190

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                L VP S+P +   + +S+   W  +V +E++          GIG  I  A     
Sbjct: 191 DLIRRLIVPASLPNIFLGIRLSIGVAWLGLVVAELMGSSS------GIGYIINDARSFSW 244

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
              +   ++    V  L D L   L   ++ W + ++
Sbjct: 245 TTVVFVGIIVFALVGKLSDSLVKWLEGRLLRWQDSYK 281


>gi|268611729|ref|ZP_06145456.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus flavefaciens FD-1]
          Length = 253

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 10/181 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +MFR  V   I+ +  + +G+ +G  P I   + P  QLL       + P 
Sbjct: 52  GRLFENIRTSMFRFAVGYSISVVSAVILGLILGRIPKIFQYVNPVLQLLRPISPTAWMPF 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V          ++   +++     + +L + ++        + +V+ +F I        
Sbjct: 112 IVLLFGIG----DVPAIVIIFIAAFFPVLLSTVSAVGNIDPVYLKVSKNFGIKQPALTWK 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P  FP    G   A G AW   +  E+          +GLG  I ++        ++
Sbjct: 168 VIFPAAFPQIANGIHLAFGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILL 221

Query: 557 L 557
            
Sbjct: 222 A 222



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  +   +L+  I+ ++  +       P+   D +   +    L +    +  R      
Sbjct: 11  VVSVAILILIWQILFSVSSYNKALFPSPKMAFDALIEMISNGRLFENIRTSMFRFAVGYS 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS++   +   +  +  ++   + P+L +++ I    ++ F V+ F           ++ 
Sbjct: 71  ISVVSAVILGLILGRIPKIFQYVNPVLQLLRPISPTAWMPFIVLLFGIG--------DVP 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI  IF +  + +  S   ++ NI     +VS++F +      W +  P + P +   + 
Sbjct: 123 AIVIIFIAAFFPVLLSTVSAVGNIDPVYLKVSKNFGIKQPALTWKVIFPAAFPQIANGIH 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++    W F+VA EM+          G+G  I  A        +L  +L +  +  L D 
Sbjct: 183 LAFGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILLATILVIGIIGILLDG 236

Query: 258 LL 259
           +L
Sbjct: 237 IL 238


>gi|167565164|ref|ZP_02358080.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia oklahomensis EO147]
          Length = 291

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 87/226 (38%), Gaps = 13/226 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASII 400
           + ++W             +         +   +L+   LG    +++ RV   + IA ++
Sbjct: 57  IALWWAATHWLAGPQSLARLFAPERALDSVPALLHDERLGMHVRVSVVRVATGLGIALVL 116

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+G+ IG    + + + P  Q L       + PL V        +    +  L+ F  
Sbjct: 117 GVPLGLLIGRVKWLDALLSPTFQFLRMISPLSWMPLAVMSFGIGERS----ICFLLAFAA 172

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W IL +  +G       + E+  S   T      +++LP I    ++G   A G  W  
Sbjct: 173 LWPILMSTASGVGQIDQRWLELGESLAATRTELAWHVVLPAITAAVLSGVRLAIGVLWIV 232

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            + +E+         + GLG  + ++ ++ ++ E+   ++++    
Sbjct: 233 LVPAEMLG------VSAGLGYLVLDTRDRLAYSELAAVIVVIGAIG 272



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 80/216 (37%), Gaps = 14/216 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
             +     P   +D VP  L    L  +   + +R+ + + I+L+       L  + + L
Sbjct: 71  QSLARLFAPERALDSVPALLHDERLGMHVRVSVVRVATGLGIALVLGVPLGLLIGRVKWL 130

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             +L P    ++ I  L ++   V+ F           E +  F +  + +W +  S   
Sbjct: 131 DALLSPTFQFLRMISPLSWMPLAVMSFGIG--------ERSICFLLAFAALWPILMSTAS 182

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  I +   E+  S   +  +  W++ +P     ++  + +++   W  +V +EM+ V 
Sbjct: 183 GVGQIDQRWLELGESLAATRTELAWHVVLPAITAAVLSGVRLAIGVLWIVLVPAEMLGVS 242

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                  G+G  +           +   ++ +  + 
Sbjct: 243 A------GLGYLVLDTRDRLAYSELAAVIVVIGAIG 272


>gi|319790873|ref|YP_004152513.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593336|gb|ADU34402.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 293

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 105/294 (35%), Gaps = 15/294 (5%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
             + +   + +  +  S  V    R              ++        +  + W     
Sbjct: 9   LPQQVPPRAASAGAASSQPVVPPVRRRAFAPLEPIGARARVLLGLGFFVVFVLVWSLATL 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFR 411
           G  +   + +    +    +       ++G   +T++RV    ++A++  +P+GI +G  
Sbjct: 69  GGFVSPTFLASPPTMVKEGWLLFTEYGFIGDIGMTVWRVFGGFLLAAVFAVPLGIAMGTW 128

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + +  +PF       PA+ F PL++       +       L++  G+ + I+  V   
Sbjct: 129 KTVEAFFEPFVSFCRYLPASAFIPLLILWAGLGEMQK----LLVIFIGSFFQIVLMVAVT 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  E A +           +++PG  P          G AW   IV+E+     
Sbjct: 185 VGGARRDLVEAAYTLGANSRGIVARVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG--- 241

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
               ++G+G  I +S    +  +++ G++++    L  +   + L   L+ +  
Sbjct: 242 ---SSSGIGHMITDSQALLNTGQIIFGIIVIGVIGLLSDFAFKALNRRLFAWAA 292



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 92/266 (34%), Gaps = 18/266 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQY 64
           + P     R+   +   + FVLV  +  +           P  +V    +    +     
Sbjct: 40  LEPIGARARVLLGLGFFVVFVLVWSLATLGGFVSPTFLASPPTMVKEGWLLFTEYGFIGD 99

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R+    +++ +F           + +     P +   + +P   F+   +++  
Sbjct: 100 IGMTVWRVFGGFLLAAVFAVPLGIAMGTWKTVEAFFEPFVSFCRYLPASAFIPLLILWAG 159

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E+  +  IF    + +   +  ++    RDL E + +   +       + 
Sbjct: 160 LG--------EMQKLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGANSRGIVARVL 211

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + PG+   + + +   W +V+ +E+I          GIG  I  +    +   I++ 
Sbjct: 212 IPGAAPGIAETLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFG 265

Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWS 267
           ++ +  +  L D     L R +  W+
Sbjct: 266 IIVIGVIGLLSDFAFKALNRRLFAWA 291


>gi|315302494|ref|ZP_07873338.1| glycine betaine transport system permease protein opuAB [Listeria
           ivanovii FSL F6-596]
 gi|313629138|gb|EFR97427.1| glycine betaine transport system permease protein opuAB [Listeria
           ivanovii FSL F6-596]
          Length = 281

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSNVVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVAGTFWVNRKGKKWGLITFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNVVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|157691067|ref|YP_001485529.1| glycine betaine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157679825|gb|ABV60969.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 281

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 18/231 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFVYA 87
           I+ ++  GI      R +     I   +     Y     +T   +L+A+VIS++      
Sbjct: 53  ILTLIFAGIAWWISTRGVALFTLIGFLLIDYLGYWHPMLQTLALVLTAVVISIVIGVPIG 112

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IF      +
Sbjct: 113 IWASQKETVRKIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIF-----SM 164

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +  +P DL E + +F  + +Q+ + + +P +   ++  +  S+      V
Sbjct: 165 PPTIRMTILGIKQVPSDLIEATEAFGSTTFQRLFKVQLPLATKTILAGINQSIMLALSMV 224

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + M+         PG+GS +  A+ +        A + ++ V    D++
Sbjct: 225 VIAAMV-------GAPGLGSEVYSAVTQLKTGIGFEAGIAIVIVAITLDRI 268



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 86/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L +    ++  +  GIAW      V  FT    L + +LG       T+  V+  ++I+
Sbjct: 45  ALGVIPSIILTLIFAGIAWWISTRGVALFTLIGFLLIDYLGYWHPMLQTLALVLTAVVIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 105 IVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +   I G    P+D  E   +F  T ++    + LP      + G   +   A
Sbjct: 163 --SMPPTIRMTILGIKQVPSDLIEATEAFGSTTFQRLFKVQLPLATKTILAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +          + +    + L+R 
Sbjct: 221 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGIGFEAGIAIVIVAITLDRI 268


>gi|159899306|ref|YP_001545553.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892345|gb|ABX05425.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
          Length = 272

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 91/267 (34%), Gaps = 20/267 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-----YQDVLY 378
                +        QR    L       V  +A  I W S   +    T     ++ +L+
Sbjct: 12  PRSAKKRLQLRQLGQRWLPWLVPIVLIGVWQLAATIGWLSARVLPAPSTILQTTWELLLH 71

Query: 379 VIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
              LG   ++  R ++ + I   +    G+  G  P          Q++   P     PL
Sbjct: 72  QNLLGDIAVSTRRALLGLAIGGSLGFIFGLLNGTFPTSERLFDSTFQMIRNIPHLALLPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+        +       L+ FG  + +  N   G  +   + +E+   + ++ W  +R+
Sbjct: 132 VILWFGIGETS----RLFLVAFGVFFPLYLNTYHGVRSIDPNLREMGIVYGLSKWGLFRH 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II PG  P  + G   A G  W   IV+E  +         G+G     + E      +V
Sbjct: 188 IIFPGALPSILVGLRFALGVMWLTLIVAESLA------SNAGIGHLTMNAREFMQTDVLV 241

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580
           +G++I        +   R +      +
Sbjct: 242 MGIVIYALLGKLADTIARLIERRSLRW 268



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 95/260 (36%), Gaps = 19/260 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           + +R  P     +  + V  +   +     +    P  I+      L   +L    + +T
Sbjct: 24  LGQRWLP-WLVPIVLIGVWQLAATIGWLSARVLPAPSTILQTTWELLLHQNLLGDIAVST 82

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L  + I     F++  L         +      ++++IP L  L   +++F      
Sbjct: 83  RRALLGLAIGGSLGFIFGLLNGTFPTSERLFDSTFQMIRNIPHLALLPLVILWFGIGETS 142

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           ++        F +     + +  + Y  + +I  +L E+   + LS W  F ++  P ++
Sbjct: 143 RL--------FLVAFGVFFPLYLNTYHGVRSIDPNLREMGIVYGLSKWGLFRHIIFPGAL 194

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E +          GIG     A +      ++  ++   
Sbjct: 195 PSILVGLRFALGVMWLTLIVAESLASNA------GIGHLTMNAREFMQTDVLVMGIVIYA 248

Query: 250 GVIFLYD---QLLFRPMIVW 266
            +  L D   +L+ R  + W
Sbjct: 249 LLGKLADTIARLIERRSLRW 268


>gi|107025553|ref|YP_623064.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116693264|ref|YP_838797.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|170737468|ref|YP_001778728.1| choline ABC transporter, permease protein [Burkholderia cenocepacia
           MC0-3]
 gi|105894927|gb|ABF78091.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116651264|gb|ABK11904.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|169819656|gb|ACA94238.1| choline ABC transporter, permease protein [Burkholderia cenocepacia
           MC0-3]
          Length = 298

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IG+    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGVGLWRVGWRFALFTTLSLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|294146862|ref|YP_003559528.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
 gi|292677279|dbj|BAI98796.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
          Length = 272

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 91/220 (41%), Gaps = 14/220 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  ++  +   L    LP     +  R+ + ++I +    +   +A  SR   + 
Sbjct: 50  RTLAAPSAVIGTLLEMLLSGELPSNLLVSFARVAAGLLIGVSLGLILGLVAGLSRAGELA 109

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P++ I ++IP L      +V+F      K        +  I    V+ +  ++Y  + 
Sbjct: 110 VDPLMQIKRTIPALALTPLFIVWFGIGETPK--------VALIAFGTVFPVYLNLYSGIR 161

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++   L + ++SF LS W++ W++ +P ++P L+  +  ++S     +V +E I      
Sbjct: 162 SVDLRLLDAAKSFGLSRWEQIWHVVLPSALPSLLVGLRYALSVAILVLVVAEQINASA-- 219

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G  I  A        I+  ++    +    D L+
Sbjct: 220 ----GLGYLINNARDFMRTDIIVVCLMVYAILGLGADWLV 255



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV   ++I   + + +G+  G        + P  Q+    PA    PL +     
Sbjct: 76  LVSFARVAAGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+ FGT + +  N+ +G  +      + A SF ++ W    +++LP   
Sbjct: 136 GETPK----VALIAFGTVFPVYLNLYSGIRSVDLRLLDAAKSFGLSRWEQIWHVVLPSAL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A   A    +V+E  +       + GLG  I  + +      +V+ +++  
Sbjct: 192 PSLLVGLRYALSVAILVLVVAEQIN------ASAGLGYLINNARDFMRTDIIVVCLMVYA 245

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 246 ILGLGADWLV 255


>gi|237736477|ref|ZP_04566958.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium mortiferum ATCC 9817]
 gi|229421519|gb|EEO36566.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium mortiferum ATCC 9817]
          Length = 253

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV++   I+    +P+GI  G +P +    +   + +   P     P+++     
Sbjct: 54  AISLRRVIIGFGISIFFALPLGIVFGIKPKLYEYFKNLLEFMRHVPPLALVPMIILWFGI 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +++I  + + I  N + G  +    + EV   F++T    ++ IILP   
Sbjct: 114 GELSK----IVIIILASFFPIFLNSLKGIVSCDEKYIEVGKVFNLTHMEIFKKIILPSAI 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G +W A I +E+ +       ++G+G  I ++ +      VV+G+L + 
Sbjct: 170 PDILLGLKLGLGYSWRAIIAAELIA------SSSGIGYLILDAQQISRSDIVVVGILSIG 223

Query: 564 CFVLALNRFL 573
              +  +   
Sbjct: 224 FLGMITDYIF 233



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 86/227 (37%), Gaps = 14/227 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
              L        P  ++    I      L    + +  R++    IS+ F      +   
Sbjct: 21  VFKLWNSFIIPSPEKVIKSFFILSKNRKLLNSVAISLRRVIIGFGISIFFALPLGIVFGI 80

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
             +L      +L+ M+ +P L  +   +++F           EL+ I  I  +  + +  
Sbjct: 81  KPKLYEYFKNLLEFMRHVPPLALVPMIILWFGIG--------ELSKIVIIILASFFPIFL 132

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  + + +      EV + F L+  + F  + +P ++P ++  + + +   W  ++A+E+
Sbjct: 133 NSLKGIVSCDEKYIEVGKVFNLTHMEIFKKIILPSAIPDILLGLKLGLGYSWRAIIAAEL 192

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           I          GIG  I  A +      ++  +L++  +  + D + 
Sbjct: 193 IASSS------GIGYLILDAQQISRSDIVVVGILSIGFLGMITDYIF 233


>gi|254249915|ref|ZP_04943235.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124876416|gb|EAY66406.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 298

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IG+    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGVGLWRVGWRFALFTTLSLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|294677745|ref|YP_003578360.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294476565|gb|ADE85953.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 283

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 12/255 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P+    + L    G       E   ++ S   +       W        +  +       
Sbjct: 12  PIETPARPLPPLSGANLRRGVEAGARVLSRYGLLLGFLALWQIAASAGWLNPSVFPPLDR 71

Query: 368 VNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +    +Q ++    L    I++ R  +    +  + +P+G+ +G  P +   + P  QL 
Sbjct: 72  IAATLWQGIVSGALLDDIAISLQRAGIAFAASVAVGVPLGLAMGQMPVVERALDPILQLF 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
               A   +P+ +  +     +       ++ + + + IL   I G         E+A S
Sbjct: 132 RQTSALALYPVFILLLGLGETSK----IFVIFWASLFPILLATIGGVQQVDGKLLEMARS 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F       +  +ILP   P    G   +   A    I +E+           GLG  +  
Sbjct: 188 FGAGRLTLFARVILPAAVPAIFVGLRLSGTTALLLLIAAEMIG------ANKGLGFQVMN 241

Query: 546 STEKGSFPEVVLGVL 560
           +        +   + 
Sbjct: 242 AQFNFRTDLMFAAIF 256



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 15/226 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL F+ +  I             P D I   +   +   +L    + +  R   A   S+
Sbjct: 45  LLGFLALWQIAASAGWLNPSVFPPLDRIAATLWQGIVSGALLDDIAISLQRAGIAFAASV 104

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                      +   +   L PIL + +    L      ++             E + IF
Sbjct: 105 AVGVPLGLAMGQMPVVERALDPILQLFRQTSALALYPVFILLLGLG--------ETSKIF 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF + ++ +  +    +  +   L E++RSF       F  + +P ++P +   + +S 
Sbjct: 157 VIFWASLFPILLATIGGVQQVDGKLLEMARSFGAGRLTLFARVILPAAVPAIFVGLRLSG 216

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +     ++A+EMI          G+G  +  A        +  A+ 
Sbjct: 217 TTALLLLIAAEMIGANK------GLGFQVMNAQFNFRTDLMFAAIF 256


>gi|227499069|ref|ZP_03929206.1| taurine transport system permease [Acidaminococcus sp. D21]
 gi|226904518|gb|EEH90436.1| taurine transport system permease [Acidaminococcus sp. D21]
          Length = 251

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 15/244 (6%)

Query: 17  PNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           P +   +   L+   + +  L        P  + +   I +    L ++A+ + +R+   
Sbjct: 7   PPLIPFIVLGLLWKFVTSAKLWTAYILPPPERVWETFLIMIQNGQLVEHAALSLMRVFIG 66

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
              + L      TL+        +   +L  +Q IP L  +   V++F      K +   
Sbjct: 67  FSCAFLLAAFLVTLSLLLPFFRKMNHGLLVFIQHIPPLSLIPLLVLWFGIGETPKFLIII 126

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA  F I+         +M   L      L EV ++   S  +  W + +P ++P +V  
Sbjct: 127 LATFFPIY--------LNMEDGLLRADPKLLEVGKTLGFSQRETLWKIRLPLALPTIVTG 178

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           M + M      ++ +EMI          G+G +I  A        ++  +L +  + F  
Sbjct: 179 MRIGMGYSLRSIIGAEMIA------ADRGLGYFILDAQTMSRSDKVIVGILAIGLIGFFL 232

Query: 256 DQLL 259
           D L 
Sbjct: 233 DGLF 236



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 16/234 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASI 399
           I    +   V     W +         ++  L +I  G       +++ RV +    A +
Sbjct: 13  IVLGLLWKFVTSAKLWTAYILPPPERVWETFLIMIQNGQLVEHAALSLMRVFIGFSCAFL 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +       P            +   P     PL+V               L++I  
Sbjct: 73  LAAFLVTLSLLLPFFRKMNHGLLVFIQHIPPLSLIPLLVLWFGIGET----PKFLIIILA 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  N+  G         EV  +   +       I LP   P  VTG     G +  
Sbjct: 129 TFFPIYLNMEDGLLRADPKLLEVGKTLGFSQRETLWKIRLPLALPTIVTGMRIGMGYSLR 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + I +E+ +         GLG +I ++       +V++G+L +      L+   
Sbjct: 189 SIIGAEMIA------ADRGLGYFILDAQTMSRSDKVIVGILAIGLIGFFLDGLF 236


>gi|183599460|ref|ZP_02960953.1| hypothetical protein PROSTU_02939 [Providencia stuartii ATCC 25827]
 gi|188021707|gb|EDU59747.1| hypothetical protein PROSTU_02939 [Providencia stuartii ATCC 25827]
          Length = 259

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 100/270 (37%), Gaps = 18/270 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           SR +  +    L+ ++V            +    P  +       +    L +    + L
Sbjct: 4   SRIVILSWLVPLSLLIVWQFSVSTGWLSSRILPEPLQVFSAGWNLIKNGELWENLGISAL 63

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R     +I      +   +   SR   ++L   + +++++P L  +   +++F       
Sbjct: 64  RAGIGFIIGSSIGLILGLITGLSRLGELLLDSSIQMIRNVPHLALIPLVILWFGID---- 119

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A IF +     + +  +    + ++   L E+++S+ L G+  F ++  P ++P
Sbjct: 120 ----ESAKIFLVALGTFFPIYLNTLHGIKHLDHKLIEMAKSYGLHGYSLFRHVIFPGALP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   +  S+   W  ++ +E I          GIG     A +      +++ ++    
Sbjct: 176 AIFVGVRFSLGLMWLTLIVAETISANA------GIGYLAMNAREFLRTDIVVFTLIIYAL 229

Query: 251 VIFLYDQ---LLFRPMIVWSNKFRLERTTG 277
           +    D    LL R ++ W  K+  +  T 
Sbjct: 230 LGKTADTLTYLLERVLLQWHPKWHKKEVTA 259



 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 84/239 (35%), Gaps = 24/239 (10%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CITM 387
           S ++ + W   +  + +     S G++ +     + L V   G              I+ 
Sbjct: 4   SRIVILSWLVPLSLLIVWQFSVSTGWLSSRI-LPEPLQVFSAGWNLIKNGELWENLGISA 62

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R  +  II S I + +G+  G        +    Q++   P     PLV+         
Sbjct: 63  LRAGIGFIIGSSIGLILGLITGLSRLGELLLDSSIQMIRNVPHLALIPLVILWFGI---- 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+  GT + I  N + G     +   E+A S+ + G+  +R++I PG  P   
Sbjct: 119 DESAKIFLVALGTFFPIYLNTLHGIKHLDHKLIEMAKSYGLHGYSLFRHVIFPGALPAIF 178

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            G   + G  W   IV+E  S         G+G     + E      VV  ++I     
Sbjct: 179 VGVRFSLGLMWLTLIVAETIS------ANAGIGYLAMNAREFLRTDIVVFTLIIYALLG 231


>gi|116050271|ref|YP_790912.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389262|ref|ZP_06878737.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313110773|ref|ZP_07796630.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|115585492|gb|ABJ11507.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310883132|gb|EFQ41726.1| putative sulfonate ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 254

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
             ++ +   P  Q L       + P+ V  +       +  +  L+ F   W IL N  A
Sbjct: 89  SRNLEAATTPAFQFLRMISPLSWMPIAVMLMGVG----DQPIYFLLAFAALWPILLNTAA 144

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G       + +++ S   T W   R +ILPGI  + +TG   A G  W   +  E+    
Sbjct: 145 GVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIGILWIVLVPCEMLG-- 202

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                + GLG YI ++ ++ ++ E++  V
Sbjct: 203 ----VSAGLGYYILDTRDRLAYSELMAMV 227



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 14/209 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
              G+     P+  +  +   L+   L ++   +  R+L  + ++LL       L   SR
Sbjct: 31  AADGLSARFSPQATLLSLGELLERRELYEHVLVSLKRVLLGLFLALLVGVPLGLLVGASR 90

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L     P    ++ I  L ++   V+             +    F +  + +W +  + 
Sbjct: 91  NLEAATTPAFQFLRMISPLSWMPIAVMLMGVG--------DQPIYFLLAFAALWPILLNT 142

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +  +     ++SRS   + W+    + +P  +  ++  + +++   W  +V  EM+ 
Sbjct: 143 AAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIGILWIVLVPCEMLG 202

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           V        G+G YI           ++ 
Sbjct: 203 VSA------GLGYYILDTRDRLAYSELMA 225


>gi|251798477|ref|YP_003013208.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546103|gb|ACT03122.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 278

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 103/234 (44%), Gaps = 17/234 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++++ I  +     +       ++ ++ I  D     ++A  T   +L+A ++S++   
Sbjct: 52  ILMILIITALAWFLGKWKVAAFALIGLLLI--DNLGYWEHAMETLSIVLTASLLSIIIGV 109

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L A+S  L  ++ P+LD+MQ++P   +L   V +F     G V G   + IFA+  
Sbjct: 110 PTGILCARSSFLQGIITPLLDLMQTMPAFVYLLPAVSFFSL---GVVPGVIASIIFAVP- 165

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +P +L E + +F  +  QK + L +P ++P ++  +  ++    
Sbjct: 166 ----PTIRLTNLGIRQVPVELVEAADAFGSTPNQKLFKLQLPMALPTMMAGINQTIMLSL 221

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV S MI          G+G+ +  A+ +        A ++++ +  L D++
Sbjct: 222 SMVVISSMI-------GAQGLGADVYRAVTQTKTGIGFEAGISIVVLAILLDRM 268



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 345 DIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
            I    ++  +A  +  W+   + +      D L        T+  V+   +++ II +P
Sbjct: 51  SILMILIITALAWFLGKWKVAAFALIGLLLIDNLGYWEHAMETLSIVLTASLLSIIIGVP 110

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI       +   I P   L+   PA V+    VS  S   +   +   +         
Sbjct: 111 TGILCARSSFLQGIITPLLDLMQTMPAFVYLLPAVSFFSLGVVPGVIASIIF----AVPP 166

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            +     G    P +  E A +F  T  +    + LP   P  + G       + +  ++
Sbjct: 167 TIRLTNLGIRQVPVELVEAADAFGSTPNQKLFKLQLPMALPTMMAGINQTIMLSLSMVVI 226

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           S +           GLGA +  +  +          + +    + L+R 
Sbjct: 227 SSMIG-------AQGLGADVYRAVTQTKTGIGFEAGISIVVLAILLDRM 268


>gi|21229643|ref|NP_635560.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766519|ref|YP_241281.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21111122|gb|AAM39484.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571851|gb|AAY47261.1| ABC transporter amino acid permease [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 490

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L Q+       +  ++ ++L+       L
Sbjct: 258 QVKLERKSEAAVAAQWLGVAPASATDGRVARLLQHTWEHLALVGISLGLALVMALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q LF  +  W+
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQALFEGLERWA 479



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 13/232 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +A Q +G      T   V  ++      +  V + + +A ++ +P+G+    RP +  
Sbjct: 267 AAVAAQWLGVAPASATDGRVARLLQHTWEHLALVGISLGLALVMALPLGVLAARRPRLGQ 326

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +     +L   P+   F  ++                 +   +   I+ N  AG ++ P
Sbjct: 327 VVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTHAGLTSIP 382

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            + ++ A +  +  W     I LP      V G  TA       + +  +   G      
Sbjct: 383 RELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQTAAVINVGTATLGALIGAG------ 436

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC-LRL 587
            G G  I           ++ G +     +  L + L+  L  + T   LRL
Sbjct: 437 -GYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQALFEGLERWATPRGLRL 486


>gi|325845259|ref|ZP_08168563.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325488700|gb|EGC91105.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 248

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 91/242 (37%), Gaps = 22/242 (9%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------------GCITMFRVV 391
           L+  W  +   + + I W    ++++  +      V                  +++R+ 
Sbjct: 4   LEKLWSFIKGFILLNIIWIIGSFLMDTRSLPMPGKVYLNLPTLFENGFYVHILASLYRIF 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V ++I+  I   VG+ +G+    +  + P    +   P     P+V++       +    
Sbjct: 64  VGLLISFTIGSLVGLLMGYSKRCNKLLNPLVYFVYPVPKTALLPVVMTLYGLGDNSK--- 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             ++++  T + ++ +V         +      S     W+ + ++  P I    +T   
Sbjct: 121 -IVIIVLITVFQVIVSVRDAVLNVEGELYNPLISLGANRWQLFLHVTFPAILSEVLTNIR 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + G A++    +E       +    GLG +I +S  + ++ ++  G++++    L L  
Sbjct: 180 LSIGTAFSVLFFAEA------YGTKQGLGYFIQDSWSRINYIDMYSGIVVLSLVGLILFI 233

Query: 572 FL 573
            +
Sbjct: 234 LI 235



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 93/243 (38%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L +F+    ++NI+          R +     + L++ +L +     +   +  R+   +
Sbjct: 7   LWSFIKGFILLNIIWIIGSFLMDTRSLPMPGKVYLNLPTLFENGFYVHILASLYRIFVGL 66

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +IS     +   L   S+R   +L P++  +  +P    L   +  +           + 
Sbjct: 67  LISFTIGSLVGLLMGYSKRCNKLLNPLVYFVYPVPKTALLPVVMTLYGLG--------DN 118

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I    V+ +  S+  ++ N+  +L     S   + WQ F ++  P  +  ++ N+
Sbjct: 119 SKIVIIVLITVFQVIVSVRDAVLNVEGELYNPLISLGANRWQLFLHVTFPAILSEVLTNI 178

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +S+   +  +  +E            G+G +I  +    + + +   ++ +  V  +  
Sbjct: 179 RLSIGTAFSVLFFAEAYG------TKQGLGYFIQDSWSRINYIDMYSGIVVLSLVGLILF 232

Query: 257 QLL 259
            L+
Sbjct: 233 ILI 235


>gi|296159783|ref|ZP_06842605.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295889997|gb|EFG69793.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 279

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 87/255 (34%), Gaps = 12/255 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--VCGVAIGIAWQSIGYIVNHFTYQDVLY 378
             +     +  L    +  V  ++ +FW     V  +A  +                   
Sbjct: 15  TRLYLGVSKGALYRWLSWIVPALVVVFWQIASRVGLIAPQVLPAPSSVAATALDLARHGD 74

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +++ R      I   I + +G+ +GF P   + +    Q++ A P     PLV+
Sbjct: 75  LFVHLGVSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVI 134

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +    L+     + I  N + G         E+A    +      R II
Sbjct: 135 VWFGVG----EVAKIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVVGLDWPAVVRRII 190

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  +TG   A   AW A +++E  +       T G+G    ++ E      ++L 
Sbjct: 191 LPGAMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLT 244

Query: 559 VLIMCCFVLALNRFL 573
           ++I     +  +  +
Sbjct: 245 IIIYAIIGVVADALV 259



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 16/242 (6%)

Query: 20  FDLLAFVLVIGIIN--ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + A V+V   I   + L   Q    P  +            L  +   + LR  +   
Sbjct: 32  WIVPALVVVFWQIASRVGLIAPQVLPAPSSVAATALDLARHGDLFVHLGVSLLRAAAGFA 91

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I          L   S     +L   + ++++IP L  L   +V+F           E+A
Sbjct: 92  IGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG--------EVA 143

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +  + ++ +  +    +  I   L E+++   L        + +P +MP ++  + 
Sbjct: 144 KIFLVALAVLFPIYINTMLGIRQIDPKLMELAKVVGLDWPAVVRRIILPGAMPSILTGVR 203

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +++  W  +V +E +          GIG     A +      IL  ++    +  + D 
Sbjct: 204 YALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIIIYAIIGVVADA 257

Query: 258 LL 259
           L+
Sbjct: 258 LV 259


>gi|260597339|ref|YP_003209910.1| alkanesulfonate transporter permease subunit [Cronobacter
           turicensis z3032]
 gi|260216516|emb|CBA29702.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Cronobacter turicensis z3032]
          Length = 263

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           QR +  +       V  +A    W S   + +  +  +  + +           I+ +R 
Sbjct: 10  QRAAPWVVPVGIIAVWQLASQAGWLSTRILPSPESVVETFWRLTASGELWQHLAISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V   I  +I + +G+  G        +    Q+L   P     PLV+            
Sbjct: 70  MVGFSIGGLIGLALGLISGLSRWGERLLDSSIQMLRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  + +       +    P  +V+          L Q+ + ++ R +    I  L
Sbjct: 19  VGIIAVWQLASQAGWLSTRILPSPESVVETFWRLTASGELWQHLAISSWRAMVGFSIGGL 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  ++  SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLALGLISGLSRWGERLLDSSIQMLRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI   L E++RS+ LSG+  F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   +L
Sbjct: 191 LMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADLSARL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++ +    
Sbjct: 245 LERVWLRWHPAYQTKEANA 263


>gi|295689420|ref|YP_003593113.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter segnis ATCC 21756]
 gi|295431323|gb|ADG10495.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter segnis ATCC 21756]
          Length = 269

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 89/261 (34%), Gaps = 16/261 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV-CGVAIGIAWQSIGYIVNHF-----T 372
           +L            +  S  R  ++  +    +   G  +G+    I    +       T
Sbjct: 2   SLATTYRISEAKPWRWPSLSRARWLSPVALLLLWELGARVGVVPPRILAAPSTVLETFWT 61

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +     +++ R    + IA ++ + +G+  G      + + P  Q+    P+  
Sbjct: 62  LTASGELPKNLAVSLARAGAGLSIALVVAVTLGLISGLSRWGETLVDPLMQIKRTIPSLA 121

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +                L+     + +  N+ +G  +      E A SF + GW 
Sbjct: 122 LTPLFIVWFGIGET----PKIALIAVAATFPLYLNLFSGIRSVDVRLVEAARSFGLRGWS 177

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R +ILPG  P +  G   A G +    ++SE  +         GLG  +  + +    
Sbjct: 178 LVREVILPGALPSFFVGLRYALGVSVLVLVISEQIN------AQAGLGYLVNNARDFMRT 231

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             +V+ +++     L  +  +
Sbjct: 232 DIIVVCLVVYALLGLGADTLV 252



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          LP+  + +  R  + + I+L+       ++  SR    ++ 
Sbjct: 49  LAAPSTVLETFWTLTASGELPKNLAVSLARAGAGLSIALVVAVTLGLISGLSRWGETLVD 108

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ I ++IP L      +V+F      K+    +AA F         +  +++  + ++
Sbjct: 109 PLMQIKRTIPSLALTPLFIVWFGIGETPKIALIAVAATF--------PLYLNLFSGIRSV 160

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E +RSF L GW     + +P ++P     +  ++      +V SE I        
Sbjct: 161 DVRLVEAARSFGLRGWSLVREVILPGALPSFFVGLRYALGVSVLVLVISEQI------NA 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  +  A        I+  ++    +    D L+
Sbjct: 215 QAGLGYLVNNARDFMRTDIIVVCLVVYALLGLGADTLV 252


>gi|323488606|ref|ZP_08093850.1| binding-protein-dependent transport systems inner membrane
           component [Planococcus donghaensis MPA1U2]
 gi|323397823|gb|EGA90625.1| binding-protein-dependent transport systems inner membrane
           component [Planococcus donghaensis MPA1U2]
          Length = 251

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 99/243 (40%), Gaps = 15/243 (6%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             A +++  + +   L        P  + + +       +L      +  R+L  +  ++
Sbjct: 11  FAALIVIWELGSRFELWHETILPSPFSVYNSLLAGFSDMTLVYDLVASFRRLLIGLAAAI 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L A+S+     L  ++  +QS+P + +L   +++F           E + IF
Sbjct: 71  LIGTSVGILLARSKTADDTLGTLVLALQSVPSIVWLPLAMMWFGLG--------EGSIIF 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +     + M  ++   + N+     + +R+   +G   F  + +P S+P  V    ++ 
Sbjct: 123 VVILGGTFVMILNVRTGIKNVDPLFIKAARTMGSNGMDLFIKVIIPASVPYFVTGARLAW 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  W  ++A E++  G      PG+G  +  A    ++  ++  M+ +  V  + D ++F
Sbjct: 183 AFAWRALMAGELLSSG------PGLGYTLRYASDFGNMSLVIGVMIIIGVVGAIVDLMIF 236

Query: 261 RPM 263
           + +
Sbjct: 237 QRI 239



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           + +++    +  R+++ +  A +I   VGI +         +      L + P+ V+ PL
Sbjct: 49  MTLVYDLVASFRRLLIGLAAAILIGTSVGILLARSKTADDTLGTLVLALQSVPSIVWLPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    +  ++I G  + ++ NV  G       F + A +    G   +  
Sbjct: 109 AMMWFGLGEGS----IIFVVILGGTFVMILNVRTGIKNVDPLFIKAARTMGSNGMDLFIK 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   PY+VTGA  A   AW A +  E+ S G       GLG  +  +++ G+   V+
Sbjct: 165 VIIPASVPYFVTGARLAWAFAWRALMAGELLSSG------PGLGYTLRYASDFGNMSLVI 218

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++I+      ++  ++  +     +   L
Sbjct: 219 GVMIIIGVVGAIVDLMIFQRIEKNVLKRWGL 249


>gi|121607757|ref|YP_995564.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552397|gb|ABM56546.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 260

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R  +  ++A +  I +G+ + +   +   I P  + +       + P        
Sbjct: 68  LSSLQRFAMGFVLALLTGIALGLLMAWFRWVDEIIGPVFEAVRFVAPIAWVPFAALWFGT 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               P     L++  G    +L N   GA      + E A       WR    ++LP   
Sbjct: 128 GIGGP----VLIIFMGALPPVLINTYRGARFVDRKYIEAARMLGAGPWRGITQVMLPAAV 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V G   + G AW + + +E+       + ++G+G  + +     +   V+  +L + 
Sbjct: 184 PAIVAGLRISAGLAWQSLVGAELI------VASSGVGYLMVKGQAGLATATVMSAMLAIG 237

Query: 564 CFVLALNRFL 573
              L ++  L
Sbjct: 238 LVGLVIDVLL 247



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+LP +   +  R     V++LL       L A  R +  ++ P+ + ++ +  + ++ F
Sbjct: 61  HTLPVHLLSSLQRFAMGFVLALLTGIALGLLMAWFRWVDEIIGPVFEAVRFVAPIAWVPF 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F     G V+         IF   +  +  + Y+    + R   E +R      W+
Sbjct: 121 AALWFGTGIGGPVL--------IIFMGALPPVLINTYRGARFVDRKYIEAARMLGAGPWR 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +V  + +S    W  +V +E+IV         G+G  +         
Sbjct: 173 GITQVMLPAAVPAIVAGLRISAGLAWQSLVGAELIVASS------GVGYLMVKGQAGLAT 226

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++ AML +  V  + D LL
Sbjct: 227 ATVMSAMLAIGLVGLVIDVLL 247


>gi|188989580|ref|YP_001901590.1| glycine betaine/carnitine/choline-binding ABC transporter
           substrate-binding and permease component [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167731340|emb|CAP49515.1| glycine betaine/carnitine/choline-binding ABC transporter
           substrate-binding and permease component [Xanthomonas
           campestris pv. campestris]
          Length = 490

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E+ V    + + P +     V  L Q+       +  ++ ++L+       L
Sbjct: 258 QVKLERKSESAVAAQWLGVAPASATEGRVARLLQHTWEHLALVGISLGLALVMALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q LF  +  W+
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQALFEGLERWA 479



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +A Q +G      T   V  ++      +  V + + +A ++ +P+G+    RP +   
Sbjct: 268 AVAAQWLGVAPASATEGRVARLLQHTWEHLALVGISLGLALVMALPLGVLAARRPRLGQV 327

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +     +L   P+   F  ++                 +   +   I+ N  AG ++ P 
Sbjct: 328 VLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTHAGLTSIPR 383

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           + ++ A +  +  W     I LP      V G  TA       + +  +   G       
Sbjct: 384 ELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQTAAVINVGTATLGALIGAG------- 436

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC-LRL 587
           G G  I           ++ G +     +  L + L+  L  + T   LRL
Sbjct: 437 GYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQALFEGLERWATPRGLRL 486


>gi|330816756|ref|YP_004360461.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327369149|gb|AEA60505.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 277

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 12/252 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVI 380
           +         +  +   V   L + W       A+   +  + +  +   ++  +   + 
Sbjct: 15  LGRGVARRGWRAIAPWLVPIGLIVAWELAARTGALSTRVLPEPLAVVRAAWSLIESGDMW 74

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               ++ +R +V   I   + + +G+  G        +    Q++   PA    PLV+  
Sbjct: 75  ANVKVSTWRALVGFAIGGGVGLVLGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILW 134

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L+  G  + I  N   G  +   +  E+A S+ + G+  +R +ILP
Sbjct: 135 FGI----DEKAKLFLVSLGVFFPIYINTYHGIRSVDANLIEMAKSYGVKGFALYRDVILP 190

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  + G   A G  W   IV+E  S        +G+G     + E      VV+G+L
Sbjct: 191 GALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGIL 244

Query: 561 IMCCFVLALNRF 572
           +        +  
Sbjct: 245 LYAILGKLADVL 256



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        +  ++   +         +    P  +V      ++   +      +T R 
Sbjct: 25  RAIAPWLVPIGLIVAWELAARTGALSTRVLPEPLAVVRAAWSLIESGDMWANVKVSTWRA 84

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      V       S+   + L   + ++++IP L  +   +++F         
Sbjct: 85  LVGFAIGGGVGLVLGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 139 --EKAKLFLVSLGVFFPIYINTYHGIRSVDANLIEMAKSYGVKGFALYRDVILPGALPSI 196

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 197 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAILG 250

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   L R  + W   ++
Sbjct: 251 KLADVLAKWLERATLRWHPAYQ 272


>gi|116751362|ref|YP_848049.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116700426|gb|ABK19614.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 200

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 8/208 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M   +       ++I  NI      VL+  +             P          +    
Sbjct: 1   MKKEDARRHARRKQILCNIITFATVVLIWQLAATAYKSDLLLPPPWKTAKAFFFAVHDPD 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
             +    T  R+     I+L        L   S+    ++ P+L  ++ +PI+ ++  T+
Sbjct: 61  TLKNLLLTLQRVTIGFGIALCAGMSLGFLMGYSKTAMQLIDPVLGTVRQVPIMAWVPLTI 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F               +F I    V+ +  +    + +I  D    +R+     W  F
Sbjct: 121 VWFGLGDGP--------TVFLIAMVGVFPILLNTVAGVQSISADYYNAARTMGAGPWSIF 172

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
             + VP +MP ++  M +++S GW  V+
Sbjct: 173 KDVMVPAAMPDILTGMRLAVSAGWMSVI 200



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 4/139 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV +   IA    + +G  +G+       I P    +   P   + PL +     
Sbjct: 66  LLTLQRVTIGFGIALCAGMSLGFLMGYSKTAMQLIDPVLGTVRQVPIMAWVPLTIVWFGL 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+     + IL N +AG  +   D+   A +     W  ++ +++P   
Sbjct: 126 GDG----PTVFLIAMVGVFPILLNTVAGVQSISADYYNAARTMGAGPWSIFKDVMVPAAM 181

Query: 504 PYYVTGAITACGGAWNASI 522
           P  +TG   A    W + I
Sbjct: 182 PDILTGMRLAVSAGWMSVI 200


>gi|317405786|gb|EFV86076.1| binding-protein-dependent transporter [Achromobacter xylosoxidans
           C54]
          Length = 285

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 97/231 (41%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+G+   +   +         +  +   + V  L     +T   M+ A  +S++      
Sbjct: 56  VVGVTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVIIGIPLG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A+   L  +++P+LD+MQ++P   +L   V+ F           ++ AI A     V
Sbjct: 116 VLMARVNWLRSIMLPVLDVMQTMPSFVYLIPVVMLFGLG--------KIPAIIATVIYAV 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +       +  + R++ E SR+F  +  Q+ + + +P ++P ++  +  +       V
Sbjct: 168 PPLIRLTDLGIRLVDREVLEASRAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G  + L I   ++   L A L ++ +  L+D++
Sbjct: 228 VIASMI-------GARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 18/231 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIW 401
           W+ VV GV I IAW     I        +L VI +      G  T+  +++   ++ II 
Sbjct: 53  WWAVV-GVTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVIIG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ +     + S + P   ++   P+ V+   VV           +   +  +    
Sbjct: 112 IPLGVLMARVNWLRSIMLPVLDVMQTMPSFVYLIPVVMLFGLG----KIPAIIATVIYAV 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++     G      +  E + +F     +    + LP   P  + G       A +  
Sbjct: 168 PPLIRLTDLGIRLVDREVLEASRAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +     +      +L  L +    +  +R 
Sbjct: 228 VIASMIG-------ARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271


>gi|293376058|ref|ZP_06622310.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645316|gb|EFF63374.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 248

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 91/242 (37%), Gaps = 22/242 (9%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------------GCITMFRVV 391
           L+  W  +   + + I W    ++++  +      V                  +++R+ 
Sbjct: 4   LEKLWSFIKGFILLNIIWIIGSFLMDTRSLPMPGKVYLNLPTLFENGFYVHILASLYRIF 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V ++I+  I   VG+ +G+    +  + P    +   P     P+V++       +    
Sbjct: 64  VGLLISFTIGSLVGLLMGYSKRCNKLLNPLVYFVYPVPKTALLPVVMTLYGLGDKSK--- 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             ++++  T + ++ +V         +      S     W+ + ++  P I    +T   
Sbjct: 121 -IVIIVLITVFQVIVSVRDAVLNVEGELYNPLISLGANRWQLFLHVTFPAILSEVLTNIR 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + G A++    +E       +    GLG +I +S  + ++ ++  G++++    L L  
Sbjct: 180 LSIGTAFSVLFFAEA------YGTKQGLGYFIQDSWSRINYIDMYSGIVVLSLVGLILFI 233

Query: 572 FL 573
            +
Sbjct: 234 LI 235



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 93/243 (38%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L +F+    ++NI+          R +     + L++ +L +     +   +  R+   +
Sbjct: 7   LWSFIKGFILLNIIWIIGSFLMDTRSLPMPGKVYLNLPTLFENGFYVHILASLYRIFVGL 66

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +IS     +   L   S+R   +L P++  +  +P    L   +  +           + 
Sbjct: 67  LISFTIGSLVGLLMGYSKRCNKLLNPLVYFVYPVPKTALLPVVMTLYGLG--------DK 118

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I    V+ +  S+  ++ N+  +L     S   + WQ F ++  P  +  ++ N+
Sbjct: 119 SKIVIIVLITVFQVIVSVRDAVLNVEGELYNPLISLGANRWQLFLHVTFPAILSEVLTNI 178

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +S+   +  +  +E            G+G +I  +    + + +   ++ +  V  +  
Sbjct: 179 RLSIGTAFSVLFFAEAYG------TKQGLGYFIQDSWSRINYIDMYSGIVVLSLVGLILF 232

Query: 257 QLL 259
            L+
Sbjct: 233 ILI 235


>gi|91974596|ref|YP_567255.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91681052|gb|ABE37354.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 286

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 97/243 (39%), Gaps = 17/243 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +++      +    P  +  I+        L ++   T  R+ S   + +L   V   ++
Sbjct: 51  LVHFGYSNGRLVPPPSKVFAIIAELAKSGELSRHIVATVGRVASGFGLGVLAGTVLGAVS 110

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
                   +L P +  +++IP + ++   +++       KV    +   F ++       
Sbjct: 111 GYWGLARQLLDPTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY------- 163

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +  ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA+
Sbjct: 164 -LGVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAA 222

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
           E +   +      G+G  +    +      I+ A++    +    D L+     P++ W 
Sbjct: 223 EFMGASE------GLGFLLIDGQQLGKPAQIVAAIVIFALLGKTTDWLIEIASAPLLRWQ 276

Query: 268 NKF 270
           + F
Sbjct: 277 DAF 279



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV     +  +    +G   G+       + P  Q L A P+  + PL +  +  +
Sbjct: 87  ATVGRVASGFGLGVLAGTVLGAVSGYWGLARQLLDPTVQALRAIPSIAWVPLFILWLGIF 146

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+  G  + +   V+    +      EV  +F ++G    R I+LP + P
Sbjct: 147 ETSK----VALIAVGVFFPVYLGVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            YV       G  W   + +E          + GLG  + +  + G   ++V  ++I   
Sbjct: 203 AYVVALRVGLGLGWMFVVAAEFMG------ASEGLGFLLIDGQQLGKPAQIVAAIVIFAL 256

Query: 565 FVLALNRFL 573
                +  +
Sbjct: 257 LGKTTDWLI 265


>gi|146282357|ref|YP_001172510.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145570562|gb|ABP79668.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 292

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 11/237 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVI 380
            IR         L +   +S    ++W     G+A  +   S G ++     +     ++
Sbjct: 37  RIRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPGAVLERIGRWWTSEGLL 96

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I+++RV+     +++I +P+G++IG    + + ++P    +   PA  F PLV+  
Sbjct: 97  GDIGISVWRVMAGFGASALIALPLGLYIGTYRPVQAFLEPLTDFIRYMPAVAFIPLVMLW 156

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V     +      L++  GT + ++  V       P    E A +         + +ILP
Sbjct: 157 VGIDEGSK----VLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRSEIVKLVILP 212

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
              P  +      CG AW   +V+E+ +        +GLG  I ++       ++  
Sbjct: 213 SAKPALLDTLRITCGWAWTYLVVAELVA------ANSGLGYAILKAQRYMHTDKIFA 263



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++ +        L      +  R+++    S L            R +   L 
Sbjct: 76  MPSPGAVLERIGRWWTSEGLLGDIGISVWRVMAGFGASALIALPLGLYIGTYRPVQAFLE 135

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+ D ++ +P + F+   +++       KV+         IF    + M   + + +  +
Sbjct: 136 PLTDFIRYMPAVAFIPLVMLWVGIDEGSKVL--------IIFIGTFFQMVLMVAEDVRRV 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P    E +++   +  +    + +P + P L+  + ++    W ++V +E++        
Sbjct: 188 PMAQIEAAQTMGANRSEIVKLVILPSAKPALLDTLRITCGWAWTYLVVAELVAANS---- 243

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +      I   +L +  +  + DQ  
Sbjct: 244 --GLGYAILKAQRYMHTDKIFAGILLIGLIGLITDQAF 279


>gi|256396485|ref|YP_003118049.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM
           44928]
 gi|256362711|gb|ACU76208.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 294

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 93/256 (36%), Gaps = 11/256 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++  + P I  ++  + V  I+    +    +   P  +   +  T            + 
Sbjct: 40  VAASVLPPIITIVLIIAVWQILYAAKIWPDWKLPGPSQVFSSLKDTFAHDDALGAVGHSI 99

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
                    S+        L  + + +   + PIL  +QS+P + ++   +++F      
Sbjct: 100 GHAAVGFGASVALGTPLGILVGRFKPVRAGIGPILSGLQSLPSVAWVPPALMFFGP---- 155

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
               +       +    V ++   +   L  +P     V  +    G     ++ +P ++
Sbjct: 156 ----SPAMLYSVVLLGAVPSIAVGVMSGLDQVPPLYLRVGHNIGARGLASVRHVLLPAAL 211

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG +  +    +  W  ++ASE+IV   ++     +G  +  +    D+     A++ +L
Sbjct: 212 PGYLAGLRQGWAFAWRSLLASEIIVQSASLGHS--LGFLLKNSQDGNDMSGAFAAIVLIL 269

Query: 250 GVIFLYDQLLFRPMIV 265
            V    +QLLF P+  
Sbjct: 270 AVGVAVNQLLFVPLER 285



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 88/243 (36%), Gaps = 9/243 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---YVIWLGCITMFRVVVLIII 396
           ++ +L I  + ++    I   W+  G      + +D       +     ++    V    
Sbjct: 49  ITIVLIIAVWQILYAAKIWPDWKLPGPSQVFSSLKDTFAHDDALGAVGHSIGHAAVGFGA 108

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           +  +  P+GI +G    + + I P    L + P+  + P  +             L  ++
Sbjct: 109 SVALGTPLGILVGRFKPVRAGIGPILSGLQSLPSVAWVPPALMFFG----PSPAMLYSVV 164

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           + G    I   V++G    P  +  V  +    G    R+++LP   P Y+ G       
Sbjct: 165 LLGAVPSIAVGVMSGLDQVPPLYLRVGHNIGARGLASVRHVLLPAALPGYLAGLRQGWAF 224

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           AW + + SE+            LG  +  S +          ++++    +A+N+ L+ P
Sbjct: 225 AWRSLLASEIIV--QSASLGHSLGFLLKNSQDGNDMSGAFAAIVLILAVGVAVNQLLFVP 282

Query: 577 LYL 579
           L  
Sbjct: 283 LER 285


>gi|77461460|ref|YP_350967.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77385463|gb|ABA76976.1| putative glycine betaine/L-proline ABC transport system, membrane
           protein [Pseudomonas fluorescens Pf0-1]
          Length = 287

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG+I +L H IQ        V    + +      Q    T  +++ A ++ ++    
Sbjct: 58  LVLIGLIALLAHFIQRKWGLTAFVVASFLLILNLGYWQETMETLAQVMFATLVCVVIGVP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 118 LGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P +MP +   +   +     
Sbjct: 175 -----IRLTYLGIRDVPQELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 230 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 279



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +     +    I   W    ++V  F     L        T+ +V+   ++  +I +P
Sbjct: 58  LVLIGLIALLAHFIQRKWGLTAFVVASFLLILNLGYWQETMETLAQVMFATLVCVVIGVP 117

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + ++P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 118 LGIVAAHKPMFYTLMRPVLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 174

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 175 IRL-TYLGIRDVPQELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVI 233

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 234 AALVG-------ADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 279


>gi|229593055|ref|YP_002875174.1| putative glycine betaine/L-proline ABC transporter membrane protein
           [Pseudomonas fluorescens SBW25]
 gi|229364921|emb|CAY53014.1| putative glycine betaine/L-proline ABC transport system, membrane
           protein [Pseudomonas fluorescens SBW25]
          Length = 281

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+ 
Sbjct: 88  WQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLT 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  + ++P++L +  ++F  S  Q   
Sbjct: 148 LFGL---GVVPGLISTVVFAIAAP-----IRLTYLGIRDVPQELMDAGKAFGCSRRQLLS 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLSMVVIAALV-------GADGLGKPVVNALNTADIALG 252

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ +  + D++  +P
Sbjct: 253 FEAGLAIVLLAIMLDRICKQP 273



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L        T+ +V+   ++  +I +P+GI    +P   + ++P
Sbjct: 69  WGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTLMRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELM 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|315649176|ref|ZP_07902266.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315275395|gb|EFU38753.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 277

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 21/236 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLF 82
            F++++ +I   L  +     P  +   +   L D          T   +++A +IS+L 
Sbjct: 50  LFIVILAVIAYFLGRL-----PLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVLL 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA SR    +++P+LD MQ++P   +L   V +F     G V G   + IFAI
Sbjct: 105 GVPLGIWAAYSRSASRIIIPVLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +  +L E + +F  +  QK + + +P +MP L+  +  ++  
Sbjct: 162 P-----PTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIML 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          GIG+ +  A+ +  +     A L ++ +  + D+ 
Sbjct: 217 SLSMVVIASMI-------GAQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%)

Query: 346 IFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             +  ++  +A  +       +    F   D L        T+  V+   +I+ ++ +P+
Sbjct: 49  YLFIVILAVIAYFLGRLPLTLFTAIGFLLIDNLGYWSQTMSTLSLVITAALISVLLGVPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW  +    S  I P    +   PA V+    V+  S   +   +   +  I       
Sbjct: 109 GIWAAYSRSASRIIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAI----PPT 164

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G       + +  +++
Sbjct: 165 IRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAMPTLMAGINQTIMLSLSMVVIA 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           G+GA +  +  +    +     L +    + L+RF
Sbjct: 225 SMIG-------AQGIGAEVYRAVTQLQIGKGFEAGLAVVILAIVLDRF 265


>gi|83716128|ref|YP_439164.1| glycine betaine/L-proline ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167577605|ref|ZP_02370479.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis TXDOH]
 gi|167615750|ref|ZP_02384385.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis Bt4]
 gi|257142284|ref|ZP_05590546.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis E264]
 gi|83649953|gb|ABC34017.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia thailandensis E264]
          Length = 300

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 71/229 (31%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +     +      + W+   +                  +T+   +   I++ ++ IP
Sbjct: 49  MWLMMAIFIGVGLWRVGWRFAIFTAASLFLIFATGFWDQTVVTLGLTLSSTIVSLVLGIP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW      +++ ++P   L+   PA V+            +   L   +  +      
Sbjct: 109 LGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G      +  E   +F  T W+    +  P   P  + G       A +  I+
Sbjct: 169 ----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVII 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 225 ASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|16803055|ref|NP_464540.1| hypothetical protein lmo1015 [Listeria monocytogenes EGD-e]
 gi|47093961|ref|ZP_00231696.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|47096347|ref|ZP_00233943.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|217964885|ref|YP_002350563.1| glycine betaine transport system permease opuAB [Listeria
           monocytogenes HCC23]
 gi|224500739|ref|ZP_03669088.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes Finland 1988]
 gi|224502670|ref|ZP_03670977.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes FSL R2-561]
 gi|226223633|ref|YP_002757740.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|254827960|ref|ZP_05232647.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|254832238|ref|ZP_05236893.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           10403S]
 gi|254898811|ref|ZP_05258735.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           J0161]
 gi|254911700|ref|ZP_05261712.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|254936026|ref|ZP_05267723.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           F6900]
 gi|254992281|ref|ZP_05274471.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           FSL J2-064]
 gi|284801347|ref|YP_003413212.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578]
 gi|284994489|ref|YP_003416257.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923]
 gi|290893835|ref|ZP_06556814.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|4760364|gb|AAD29105.1|AF039835_2 putative glycine betaine membrane transport protein GbuB [Listeria
           monocytogenes]
 gi|16410417|emb|CAC99093.1| gbuB [Listeria monocytogenes EGD-e]
 gi|47015305|gb|EAL06242.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|47017660|gb|EAL08458.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217334155|gb|ACK39949.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes HCC23]
 gi|225876095|emb|CAS04801.1| Putative glycine betaine ABC transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258600342|gb|EEW13667.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|258608614|gb|EEW21222.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           F6900]
 gi|284056909|gb|ADB67850.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578]
 gi|284059956|gb|ADB70895.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923]
 gi|290556662|gb|EFD90197.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293589649|gb|EFF97983.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|307570556|emb|CAR83735.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes L99]
 gi|313609549|gb|EFR85092.1| glycine betaine transport system permease protein opuAB [Listeria
           monocytogenes FSL F2-208]
 gi|328466908|gb|EGF38017.1| hypothetical protein LM1816_14577 [Listeria monocytogenes 1816]
          Length = 282

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +  F        G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|221067184|ref|ZP_03543289.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220712207|gb|EED67575.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 252

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV+    I  +  + +G  +G        +    Q+L   P     PL++  +  
Sbjct: 53  GVSLSRVLAGFSIGMLSGLVLGTAVGLSQFNHDLLDRSLQMLRTIPHLALVPLMILWLGI 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+  GT + +  N  +G         E+  S+ ++     + II+PG  
Sbjct: 113 ----DETPRILLVALGTLFPVYINTASGIKNVDAKLLEMGKSYGLSRKELIKQIIIPGAM 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G AW   +++E  +  +      G+G  +  + E      ++  +L+  
Sbjct: 169 PSILVGIRYALGVAWLTLVIAETIASRN------GIGYMVQNARELLRIDIIIFAILLYA 222

Query: 564 CFVLALNRFLWHPLYL 579
                 +  +    Y 
Sbjct: 223 LAGWLADWLIRQIEYR 238



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 95/233 (40%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +          ++L      +  R+L+   I +L   V  T    S+    +L 
Sbjct: 29  LPSPITVAHAAYEQWTNNTLWTDIGVSLSRVLAGFSIGMLSGLVLGTAVGLSQFNHDLLD 88

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++       +++   L  +F ++         +    + N+
Sbjct: 89  RSLQMLRTIPHLALVPLMILWLGIDETPRILLVALGTLFPVY--------INTASGIKNV 140

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ +S+ LS  +    + +P +MP ++  +  ++   W  +V +E I   +    
Sbjct: 141 DAKLLEMGKSYGLSRKELIKQIIIPGAMPSILVGIRYALGVAWLTLVIAETIASRN---- 196

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFR 271
             GIG  +  A +   +  I++A+L      +L D L+ +    ++ W+  ++
Sbjct: 197 --GIGYMVQNARELLRIDIIIFAILLYALAGWLADWLIRQIEYRVLRWNPAYK 247


>gi|167572267|ref|ZP_02365141.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia oklahomensis C6786]
          Length = 291

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 87/226 (38%), Gaps = 13/226 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASII 400
           + ++W             +         +   +L+   LG    +++ RV   + IA ++
Sbjct: 57  IALWWAATHWLAGPQSLARLFAPERALDSVPALLHDERLGMHVRVSVVRVATGLGIALVL 116

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+G+ IG    + + + P  Q L       + PL V        +    +  L+ F  
Sbjct: 117 GVPLGLLIGRVKWLDALLSPTFQFLRMISPLSWMPLAVMSFGIGERS----ICFLLAFAA 172

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W IL +  +G       + E+  S   T      +++LP I    ++G   A G  W  
Sbjct: 173 LWPILMSTASGVGQIDRRWLELGESLAATRTELAWHVVLPAITAAVLSGVRLAIGVLWIV 232

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            + +E+         + GLG  + ++ ++ ++ E+   ++++    
Sbjct: 233 LVPAEMLG------VSAGLGYLVLDTRDRLAYSELAAVIVVIGAIG 272



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 14/216 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
             +     P   +D VP  L    L  +   + +R+ + + I+L+       L  + + L
Sbjct: 71  QSLARLFAPERALDSVPALLHDERLGMHVRVSVVRVATGLGIALVLGVPLGLLIGRVKWL 130

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             +L P    ++ I  L ++   V+ F           E +  F +  + +W +  S   
Sbjct: 131 DALLSPTFQFLRMISPLSWMPLAVMSFGIG--------ERSICFLLAFAALWPILMSTAS 182

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  I R   E+  S   +  +  W++ +P     ++  + +++   W  +V +EM+ V 
Sbjct: 183 GVGQIDRRWLELGESLAATRTELAWHVVLPAITAAVLSGVRLAIGVLWIVLVPAEMLGVS 242

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                  G+G  +           +   ++ +  + 
Sbjct: 243 A------GLGYLVLDTRDRLAYSELAAVIVVIGAIG 272


>gi|17988894|ref|NP_541527.1| glycine betaine/L-proline transport system permease protein proW
           [Brucella melitensis bv. 1 str. 16M]
 gi|225686509|ref|YP_002734481.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|256043617|ref|ZP_05446544.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111346|ref|ZP_05452372.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256262352|ref|ZP_05464884.1| prion protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260564808|ref|ZP_05835293.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265990036|ref|ZP_06102593.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265992853|ref|ZP_06105410.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|17984721|gb|AAL53791.1| glycine betaine/l-proline transport system permease protein prow
           [Brucella melitensis bv. 1 str. 16M]
 gi|225642614|gb|ACO02527.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|260152451|gb|EEW87544.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|262763723|gb|EEZ09755.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263000705|gb|EEZ13395.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092082|gb|EEZ16379.1| prion protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326410891|gb|ADZ67955.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326554182|gb|ADZ88821.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 301

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD++Q++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLIQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLIQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|167584096|ref|ZP_02376484.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 298

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 16/234 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIAS 398
           L      ++  + IG+    +G+    FT   +L +   G      IT+   +   II+ 
Sbjct: 44  LQAIPMWLMMAIFIGVGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSSTIISL 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +  + 
Sbjct: 104 VLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMP 163

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                       G      +  E   +F  T W+    +  P   P  + G       A 
Sbjct: 164 PAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMAL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 220 SMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|302391229|ref|YP_003827049.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
 gi|302203306|gb|ADL11984.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 287

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 103/236 (43%), Gaps = 16/236 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+I +  I    ++   +   +   + + L++  +      T   +++++V+ L+    
Sbjct: 66  FLLIAVFAIAAWKLKGKNMAVFVALGLMLVLNLR-MWDPLVTTMASIITSVVVCLILGIP 124

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+SR + ++  P+LD MQ+IP   +L   +++F     G V G     +FAI   
Sbjct: 125 IGILKARSRIIDLITRPMLDFMQTIPPFVYLIPALMFFGL---GNVSGVIATVVFAIAPP 181

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  +  +  +L+E  R+F  + WQ  + + +P ++P ++  +   +     
Sbjct: 182 -----IRLTYLGIKQVSDELKEAGRAFGCTPWQMLYKIELPLALPSIMMGVNQCIMLSLS 236

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            VV + MI  G       G+G  +  ++   D+     A L ++ +  + D++  R
Sbjct: 237 MVVIAAMIGAG-------GLGKPVLRSLSTVDIGLGFEAGLGVVILAMILDRIFGR 285



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 11/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM  ++  +++  I+ IP+GI       I    +P    +   P  V+    +  + ++ 
Sbjct: 107 TMASIITSVVVCLILGIPIGILKARSRIIDLITRPMLDFMQTIPPFVYL---IPALMFFG 163

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     +   ++F     I      G     ++ KE   +F  T W+    I LP   P 
Sbjct: 164 LGNVSGVIATVVFAIAPPIRL-TYLGIKQVSDELKEAGRAFGCTPWQMLYKIELPLALPS 222

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +   G       GLG  +  S             L +   
Sbjct: 223 IMMGVNQCIMLSLSMVVIAAMIGAG-------GLGKPVLRSLSTVDIGLGFEAGLGVVIL 275

Query: 566 VLALNRFLWH 575
            + L+R    
Sbjct: 276 AMILDRIFGR 285


>gi|237802385|ref|ZP_04590846.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025242|gb|EGI05298.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 281

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  LVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +          I   W    +++  F     L+       T+ +V+   ++  +I +P
Sbjct: 52  LVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + I+P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 112 LGIIAAHKPLFYTIIRPLLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 169 IRL-TYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 228 AALVG-------ADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|271963354|ref|YP_003337550.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506529|gb|ACZ84807.1| ABC transporter, permease protein [Streptosporangium roseum DSM
           43021]
          Length = 263

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++   ++A +I   VG+ +G RP     + P  Q   A P  +  P  ++  +  
Sbjct: 67  ASIGRLLAGWVLAGVIGTAVGLVLGRRPLYFRFVDPLVQFARAIPPPMLLPFFMALFAIG 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     +++FG  W +L N   GA      + + A  F ++  +    ++LP   P
Sbjct: 127 P----QMQINVIVFGIIWPVLINAAEGARHIDRQYVDTARVFGLSLKQRLFLLVLPAAMP 182

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   +   A    ++SE+         T G+G  + ++      P V   ++++  
Sbjct: 183 KIFAGLRVSLSLALILMVISELVG------STDGIGFQLLDAQRSYDLPGVWGTIVVLGV 236

Query: 565 FVLALN 570
               LN
Sbjct: 237 LGYVLN 242



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 96/265 (36%), Gaps = 25/265 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--------VHSLPQYA 65
           R    ++ +   ++V  ++      +           +  + L           +  +  
Sbjct: 6   RAAGRLWAVPVVLVVWELVTRAAENLSFPPPTTIAASMYEMWLTGPAERLWLTDAALENI 65

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L+  V++ +       +  +       + P++   ++IP    L F +  F  
Sbjct: 66  PASIGRLLAGWVLAGVIGTAVGLVLGRRPLYFRFVDPLVQFARAIPPPMLLPFFMALFAI 125

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  I    +W +  +  +   +I R   + +R F LS  Q+ + L +
Sbjct: 126 G--------PQMQINVIVFGIIWPVLINAAEGARHIDRQYVDTARVFGLSLKQRLFLLVL 177

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +S+S     +V SE++   D      GIG  +  A +  DL  +   +
Sbjct: 178 PAAMPKIFAGLRVSLSLALILMVISELVGSTD------GIGFQLLDAQRSYDLPGVWGTI 231

Query: 246 LTMLGVIFLYDQLLF---RPMIVWS 267
           + +  + ++ +       R ++ W 
Sbjct: 232 VVLGVLGYVLNSAFLAAERRVLSWH 256


>gi|152985765|ref|YP_001348292.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960923|gb|ABR82948.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 254

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
             ++ +   P  Q L       + P+ V  +       +  +  L+ F   W IL N  A
Sbjct: 89  SRNLEAATTPAFQFLRMISPLSWMPIAVMLMGVG----DQPIYFLLAFAALWPILLNTAA 144

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G       + +++ S   T W   R +ILPGI  + +TG   A G  W   +  E+    
Sbjct: 145 GVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIGILWIVLVPCEMLG-- 202

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                + GLG YI ++ ++ ++ E++  V
Sbjct: 203 ----VSAGLGYYILDTRDRLAYSELMAMV 227



 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 14/209 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
              G+     P+  +  +   L+   L ++   +  R+L  + ++LL       L   SR
Sbjct: 31  AADGLSARFSPQATLLSLGELLERRELYEHVLVSLKRVLLGLFLALLVGVPLGLLVGASR 90

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L     P    ++ I  L ++   V+             +    F +  + +W +  + 
Sbjct: 91  NLEAATTPAFQFLRMISPLSWMPIAVMLMGVG--------DQPIYFLLAFAALWPILLNT 142

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +  +     ++SRS   + W+    + +P  +  ++  + +++   W  +V  EM+ 
Sbjct: 143 AAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIGILWIVLVPCEMLG 202

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           V        G+G YI           ++ 
Sbjct: 203 VSA------GLGYYILDTRDRLAYSELMA 225


>gi|258512805|ref|YP_003186239.1| binding-protein-dependent transport systems inner membrane
           component [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479531|gb|ACV59850.1| binding-protein-dependent transport systems inner membrane
           component [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 260

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 102/258 (39%), Gaps = 17/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P +  +   V+   + +  +   +    P  +VD   +      L  Y + +  R  
Sbjct: 11  RVAPWVLPVAVLVIWQALGSAGVISRRILPTPLGVVDAALMLARQGVLWTYIATSAARAF 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S   I     F   TL   S++   +L   + ++++IP L  +   +V+F          
Sbjct: 71  SGFFIGATVGFTLGTLNGISKKASRLLDTPIQMIRTIPHLALVPLVIVWFGIG------- 123

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +       M  + Y  + ++   L E++R +R S  + F  + +P ++P ++
Sbjct: 124 -EQAKVFLVALGTAIPMYMNTYFGIQSLDPGLLEMARVYRFSRLKMFGRVILPGALPSVL 182

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+   W  ++ +E I          GIG  +  A +   +  ++  ++    +  
Sbjct: 183 SGVRYSLGVMWVTLIVAETISANS------GIGYMVMNAQEFMQMNIVVLGVVLYALLGK 236

Query: 254 LYD---QLLFRPMIVWSN 268
           L D   ++L   ++ W  
Sbjct: 237 LSDVIARVLETRLLRWHP 254



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 79/249 (31%), Gaps = 12/249 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLG 383
            +   F    +   +   + + W  +     I   I    +G +           +    
Sbjct: 3   RWRMWFWNRVAPWVLPVAVLVIWQALGSAGVISRRILPTPLGVVDAALMLARQGVLWTYI 62

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  R      I + +   +G   G     S  +    Q++   P     PLV+     
Sbjct: 63  ATSAARAFSGFFIGATVGFTLGTLNGISKKASRLLDTPIQMIRTIPHLALVPLVIVWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT   +  N   G  +      E+A  +  +  + +  +ILPG  
Sbjct: 123 G----EQAKVFLVALGTAIPMYMNTYFGIQSLDPGLLEMARVYRFSRLKMFGRVILPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G   + G  W   IV+E  S        +G+G  +  + E      VVLGV++  
Sbjct: 179 PSVLSGVRYSLGVMWVTLIVAETIS------ANSGIGYMVMNAQEFMQMNIVVLGVVLYA 232

Query: 564 CFVLALNRF 572
                 +  
Sbjct: 233 LLGKLSDVI 241


>gi|323178374|gb|EFZ63952.1| taurine transport system permease protein tauC [Escherichia coli
           1180]
          Length = 252

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 58  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 118 GETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 174 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 227

Query: 564 CFVLALN---RFLWHPLYLY 580
                L    R L   L  +
Sbjct: 228 IIAFLLELGLRALQRRLTPW 247



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 14  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 74  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 126 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
            GW  +VA+E+I          G+G  +  A +      +L  +  +  + FL +   + 
Sbjct: 186 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 239

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 240 LQRRLTPWH 248


>gi|289672390|ref|ZP_06493280.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|302188551|ref|ZP_07265224.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. syringae 642]
 gi|330898813|gb|EGH30232.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330938581|gb|EGH42155.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330979968|gb|EGH78238.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 281

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  FVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ PILD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAHKPLFYTIIRPILDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L+       T+ +V+   ++  +I +P+GI    +P   + I+P
Sbjct: 69  WGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 ILDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|46907247|ref|YP_013636.1| glycine betaine/L-proline ABC transporter permease [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254823712|ref|ZP_05228713.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|254852511|ref|ZP_05241859.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254931399|ref|ZP_05264758.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|255520605|ref|ZP_05387842.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL J1-175]
 gi|300764225|ref|ZP_07074220.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|46880514|gb|AAT03813.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|258605819|gb|EEW18427.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|293582949|gb|EFF94981.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|293592934|gb|EFG00695.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|300515215|gb|EFK42267.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|328475365|gb|EGF46138.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes 220]
 gi|332311424|gb|EGJ24519.1| hypothetical protein LMOSA_19070 [Listeria monocytogenes str. Scott
           A]
          Length = 282

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVLGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|299533368|ref|ZP_07046750.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni S44]
 gi|298718574|gb|EFI59549.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni S44]
          Length = 257

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 10/226 (4%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
            P     L +   + ++L          V+       +  +                 +T
Sbjct: 8   SPRAKWLLGTGFFLLFLLIWSAVTFGGLVSPTFLASPLTMLREGILLFTEFDFHHDIGMT 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++RV+   I+ASI+ +P+GI +G    + +  +PF       PA+ F PL++        
Sbjct: 68  VWRVMGGFILASIVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGEA 127

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L++  G+ + I   V         D  E A +   +     + +++PG  P  
Sbjct: 128 QK----LLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAAPGI 183

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
                   G AW   IV+E+         ++G+G  I +S    + 
Sbjct: 184 AETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNT 223



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 89/250 (35%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L F+L+   +    L        P  ++    +             T  R++   +++ 
Sbjct: 20  FLLFLLIWSAVTFGGLVSPTFLASPLTMLREGILLFTEFDFHHDIGMTVWRVMGGFILAS 79

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++       K++        
Sbjct: 80  IVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGEAQKLL-------- 131

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +T  +  ++    +DL E + +   S       + +P + PG+   + + +
Sbjct: 132 VIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAAPGIAETLRLVL 191

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D +  
Sbjct: 192 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDFIFK 245

Query: 259 -LFRPMIVWS 267
            + R M  WS
Sbjct: 246 TVNRRMFEWS 255


>gi|241554169|ref|YP_002979382.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240863475|gb|ACS61137.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 283

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R       A +I IP+G+++G    +   + P  QL     A   +P+ +  +  
Sbjct: 89  AISLQRSGTAFAFAVVIGIPLGLFMGQVRAVEQALDPILQLFRQTSALALYPVFILLLGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++ + T + +L   I G         E+A ++       +R +ILP   
Sbjct: 149 GETSK----IFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGPLTIFRRVILPASV 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P    G   +   A    I +E+           G+G  +  +      P + 
Sbjct: 205 PAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQVMNAQYNFQIPLMF 251



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 84/229 (36%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
           + P    L+ F++   + +           P D+ +  +   L   +L    + +  R  
Sbjct: 37  LLPRYGLLIGFLVFWQVSSTRGWVNPAIFPPLDVILSALWTNLANGALLDDIAISLQRSG 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 97  TAFAFAVVIGIPLGLFMGQVRAVEQALDPILQLFRQTSALALYPVFILLLGLG------- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  +    +  + + L E++R++       F  + +P S+P + 
Sbjct: 150 -ETSKIFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGPLTIFRRVILPASVPAIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 209 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 251


>gi|163795907|ref|ZP_02189871.1| putative BC-type proline/glycine betaine transport system, permease
           component [alpha proteobacterium BAL199]
 gi|159178940|gb|EDP63476.1| putative BC-type proline/glycine betaine transport system, permease
           component [alpha proteobacterium BAL199]
          Length = 288

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +I ++  L   +  +     +V    + +      +  + T   +LSA ++ +L    
Sbjct: 58  IALIALVAGLAWWLHRSIGLVALVVAGLLLILNLGYWEATTETLALVLSATLVCVLIGVP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA +R     + PILD+MQ+IP   +L  T++ F     G V G     +FA+   
Sbjct: 118 VGIYAAHNRWFYSGIRPILDLMQTIPTFVYLIPTLMLFGL---GVVPGLISTVVFAVPAP 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + N+P+ L E   +F  + WQ    + +P +MP ++  +   +     
Sbjct: 175 -----IRLTELGVRNVPKPLIEAGEAFGATRWQLLLKVELPHAMPTIMAGVTQCIMLSLS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     A L ++ V  L D+++
Sbjct: 230 MVVIAALVGAN-------GLGKPVVRALNTVNIAQGFEAGLAIVIVAILMDRIM 276



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 83/247 (33%), Gaps = 17/247 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQS------IGYIVNHFTYQDVLYVIWLGCITMF 388
            + + V ++L +     +  +  G+AW        +  +V        L        T+ 
Sbjct: 43  WAIEGVIWLLSVVPPIALIALVAGLAWWLHRSIGLVALVVAGLLLILNLGYWEATTETLA 102

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V+   ++  +I +PVGI+        S I+P   L+   P  V+    +  +  + L  
Sbjct: 103 LVLSATLVCVLIGVPVGIYAAHNRWFYSGIRPILDLMQTIPTFVYL---IPTLMLFGLGV 159

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              L   ++F     I      G    P    E   +F  T W+    + LP   P  + 
Sbjct: 160 VPGLISTVVFAVPAPIRL-TELGVRNVPKPLIEAGEAFGATRWQLLLKVELPHAMPTIMA 218

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       + +  +++ +           GLG  +  +    +  +     L +    + 
Sbjct: 219 GVTQCIMLSLSMVVIAALVG-------ANGLGKPVVRALNTVNIAQGFEAGLAIVIVAIL 271

Query: 569 LNRFLWH 575
           ++R +  
Sbjct: 272 MDRIMRQ 278


>gi|163737851|ref|ZP_02145268.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389377|gb|EDQ13729.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 318

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 95/232 (40%), Gaps = 17/232 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFV 85
             +I +L+      T    +   V +      L  +   A +T   +     +S+LF   
Sbjct: 85  WILIPLLVLATWAATRKLGVTIFVAVVFLFFGLIDHLDVALQTLSIIFVCTGLSVLFGVP 144

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + ++S R+  +++PILD++Q++P   +L   +  F    P            AI   
Sbjct: 145 VGIMMSRSDRMQKIMLPILDMLQTLPSFVYLIPLIFLFSVTEPKLYG-------IAIILY 197

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + +D+ E + +F ++  QK + + +P ++P ++  +  ++     
Sbjct: 198 AIVPVIRLTDLGIRLVDKDVVEAADAFGMTDRQKLYGVQLPLALPNIMAGVNQTIMMSLA 257

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + ++         PG+G  +   I+  +L   L A   ++ +  + D+
Sbjct: 258 MVVIASLVS-------APGLGVLVLRGIRNLELGVGLVAGFGIVLLAVVLDR 302



 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 75/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                 +    V+   A         ++   F +  ++  + +   T+  + V   ++ +
Sbjct: 81  TIPWWILIPLLVLATWAATRKLGVTIFVAVVFLFFGLIDHLDVALQTLSIIFVCTGLSVL 140

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +PVGI +     +   + P   +L   P+ V+    +  +  + +       + +I  
Sbjct: 141 FGVPVGIMMSRSDRMQKIMLPILDMLQTLPSFVYL---IPLIFLFSVTEPKLYGIAIILY 197

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F +T  +    + LP   P  + G       +  
Sbjct: 198 AIVPVIRLTDLGIRLVDKDVVEAADAFGMTDRQKLYGVQLPLALPNIMAGVNQTIMMSLA 257

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++    +    + L+R
Sbjct: 258 MVVIASLVS-------APGLGVLVLRGIRNLELGVGLVAGFGIVLLAVVLDR 302


>gi|259908898|ref|YP_002649254.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224964520|emb|CAX56030.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478892|emb|CAY74808.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           pyrifoliae DSM 12163]
          Length = 263

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 102/256 (39%), Gaps = 18/256 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84
           V++  + +             + + +    L     L Q+ + ++ R      I      
Sbjct: 22  VVLWQLASWSGWLSTRILPSPEAIVVTFCNLSASGELWQHLAISSWRAAIGFSIGGSIGL 81

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   +   SR    +L   + +++++P L  +   +++F           E A IF +  
Sbjct: 82  LLGLITGISRLGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ETAKIFLVAL 133

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  + +  + NI R L E++RS+ LSGW  F  + +P ++P ++  +  ++   W
Sbjct: 134 GTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGALPSIMVGVRFALGLMW 193

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
             ++ +E I          GIG     A +      ++ A++    +  L D   QLL R
Sbjct: 194 LTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLER 247

Query: 262 PMIVWSNKFRLERTTG 277
             + W   ++L+    
Sbjct: 248 VWLRWHPAYQLKEENA 263



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +   I   I + +G+  G        +    Q+L   P     PLV+     
Sbjct: 63  AISSWRAAIGFSIGGSIGLLLGLITGISRLGERLLDTSVQMLRNVPHLALIPLVILWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++GW  +  ++LPG  
Sbjct: 123 ----DETAKIFLVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232

Query: 564 CFVLALNR---------FLWHPLYLYGTR 583
                 +            WHP Y     
Sbjct: 233 LLGKLADVSAQLLERVWLRWHPAYQLKEE 261


>gi|118472579|ref|YP_888857.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Mycobacterium smegmatis str. MC2 155]
 gi|118173866|gb|ABK74762.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner
           membrane subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 296

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNH 370
           V++  R             L +     V  +L + W        V+  +    +  + ++
Sbjct: 27  VERDFRPSASESRRGRTRRLSVGIRFVVPVLLLVAWQVAAAWELVSPSVLPGPLTILQSY 86

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                +  +     I++ R  + ++I  I  + +G+  G             Q+L   P 
Sbjct: 87  RELWQIGDLQAALPISLQRAGLGLLIGGITGLVLGVAAGLWAVAERIYDAPLQMLRTIPF 146

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL V        +       L++  + + +  N   G  A      EV  +F ++ 
Sbjct: 147 IAMVPLFVVWFGIGEESK----VALIVGASIFPVYLNTYHGIRAIDRKLLEVGQTFALSR 202

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R +++P   P  + G   A G A  A + +E  +       T+G+G  +  + +  
Sbjct: 203 RETIRLVVVPLAMPSILVGWRYAAGTALLALVAAEQIN------TTSGIGYILNTANQFQ 256

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               ++ G+L+     + ++  +
Sbjct: 257 RTDIIIAGILVYAALGILVDVIM 279



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 91/248 (36%), Gaps = 23/248 (9%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ------YASRTTLRMLSAMVISLL 81
           V+ ++   +    E   P  +   + I      L Q          +  R    ++I  +
Sbjct: 56  VLLLVAWQVAAAWELVSPSVLPGPLTILQSYRELWQIGDLQAALPISLQRAGLGLLIGGI 115

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V    A        +    L ++++IP +  +   VV+F      KV     A+IF 
Sbjct: 116 TGLVLGVAAGLWAVAERIYDAPLQMLRTIPFIAMVPLFVVWFGIGEESKVALIVGASIFP 175

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + Y  +  I R L EV ++F LS  +    + VP +MP ++     +  
Sbjct: 176 VY--------LNTYHGIRAIDRKLLEVGQTFALSRRETIRLVVVPLAMPSILVGWRYAAG 227

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                +VA+E I          GIG  +  A + Q    I+  +L    +  L D   +L
Sbjct: 228 TALLALVAAEQI------NTTSGIGYILNTANQFQRTDIIIAGILVYAALGILVDVIMRL 281

Query: 259 LFRPMIVW 266
           + R  + W
Sbjct: 282 IERAALPW 289


>gi|70730543|ref|YP_260284.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344842|gb|AAY92448.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5]
          Length = 255

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 89/231 (38%), Gaps = 17/231 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      L    L ++   +  R+     +  L   V+  L A S+ +     
Sbjct: 39  LVPPAQVLHTFETLLASGELLEHLHNSLSRLGLGFALGALGGLVFGVLMALSKTVEAYCA 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   ++ IP +  +   V+             E   I  +  +  + +  +  + +  I
Sbjct: 99  PLFHTLRQIPSIALIPMFVLLLGID--------ETFKIVIVAKTAFFPVALAASEGVKAI 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR   EV+  +RL        + +P + P ++  + + ++  W  +VA+E++        
Sbjct: 151 PRSYFEVADVYRLRWPTLVRQIALPAAAPPIITGLRIGLTRCWVVLVATELLAADS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             G+G  I +A +   +  ++  ++    + F+ D   + L + ++ W  +
Sbjct: 207 --GLGQMIEMARQMLRIDVVMVGIVVTGVIGFVLDFSFRRLEQRVLRWQTR 255



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 11/192 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   + ++  +  G+ +     + +   P    L   P+    P+ V  +    
Sbjct: 65  SLSRLGLGFALGALGGLVFGVLMALSKTVEAYCAPLFHTLRQIPSIALIPMFVLLLGI-- 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                +  +++     + +      G  A P  + EVA  + +      R I LP   P 
Sbjct: 123 --DETFKIVIVAKTAFFPVALAASEGVKAIPRSYFEVADVYRLRWPTLVRQIALPAAAPP 180

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG        W   + +E+ +        +GLG  I  + +      V++G+++    
Sbjct: 181 IITGLRIGLTRCWVVLVATELLA------ADSGLGQMIEMARQMLRIDVVMVGIVVTGVI 234

Query: 566 VLALNRFLWHPL 577
              L+ F +  L
Sbjct: 235 GFVLD-FSFRRL 245


>gi|146276830|ref|YP_001166989.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555071|gb|ABP69684.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 270

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 94/244 (38%), Gaps = 17/244 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +   L+  +    P  +   +       +L  +A  T  R+ +   + +    +   +
Sbjct: 37  AAVAAGLNSGRLLPPPSAVARTLWSLWQGGALADHAMATLGRVGAGFGVGVAAGTLAGAV 96

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              SR    +L P L  +++IP + ++   +++F           E + I  I     + 
Sbjct: 97  TGYSRLASRLLDPSLQALRAIPSIAWVPLFILWFGIF--------ETSKIVLIAVGVFFP 148

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +  ++  + R + EV R +RLSG      + +P  +P  V  +   +  GW FVVA
Sbjct: 149 VYLGLMAAIRCVDRKIVEVGRIYRLSGPAMVGRILLPAVLPAYVTALRSGLGLGWMFVVA 208

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           +E +   +      G+G  +    +      I+ A++    +    D L   +  P + W
Sbjct: 209 AEFMGASE------GLGYLLIDGQQLGKPGQIVAAIIAFALLGKATDSLVAWIAAPFLRW 262

Query: 267 SNKF 270
            + F
Sbjct: 263 EDGF 266



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           +      +      T+ RV     +        G   G+    S  + P  Q L A P+ 
Sbjct: 61  SLWQGGALADHAMATLGRVGAGFGVGVAAGTLAGAVTGYSRLASRLLDPSLQALRAIPSI 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL +     +  +      +L+  G  + +   ++A          EV   + ++G 
Sbjct: 121 AWVPLFILWFGIFETSK----IVLIAVGVFFPVYLGLMAAIRCVDRKIVEVGRIYRLSGP 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                I+LP + P YVT   +  G  W   + +E          + GLG  + +  + G 
Sbjct: 177 AMVGRILLPAVLPAYVTALRSGLGLGWMFVVAAEFMG------ASEGLGYLLIDGQQLGK 230

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             ++V  ++       A +  +
Sbjct: 231 PGQIVAAIIAFALLGKATDSLV 252


>gi|310826693|ref|YP_003959050.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612]
 gi|308738427|gb|ADO36087.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612]
          Length = 270

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV+    IA  + + +G   G  P +     P   L+ A P   + P+ +     
Sbjct: 72  GISLLRVLSGFFIAGSLGMIMGFLTGRIPVLKRLFDPVIHLIKAVPGIGWLPIAIVWFGV 131

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N       LM     + +  N  AGA+A P  + +        G+  +R I+ P  F
Sbjct: 132 GEGN----TLFLMSLAAFFPVYVNTAAGAAAIPEMYIQAGQMLGAQGFGLFRAIVFPAAF 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G     G AW   ++ E      +   T GLGA ++++   G    V+  ++++ 
Sbjct: 188 PQAAVGLRLGLGVAWAYLVLGE------VTGVTKGLGAIMSDARMLGHVEMVLTAMIVIA 241

Query: 564 CFVLALNRFL 573
                 +  L
Sbjct: 242 VAAKVTDFLL 251



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +    + LR+LS   I+     +   L  +   L  +  P++ +++++P +G+L  
Sbjct: 65  GALWENLGISLLRVLSGFFIAGSLGMIMGFLTGRIPVLKRLFDPVIHLIKAVPGIGWLPI 124

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F       +    LAA F ++         +       IP    +  +     G+ 
Sbjct: 125 AIVWFGVGEGNTLFLMSLAAFFPVYV--------NTAAGAAAIPEMYIQAGQMLGAQGFG 176

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +  P + P     + + +   W ++V      +G+      G+G+ ++ A     +
Sbjct: 177 LFRAIVFPAAFPQAAVGLRLGLGVAWAYLV------LGEVTGVTKGLGAIMSDARMLGHV 230

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L AM+ +     + D LL
Sbjct: 231 EMVLTAMIVIAVAAKVTDFLL 251


>gi|271963348|ref|YP_003337544.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506523|gb|ACZ84801.1| ABC transporter, permease protein [Streptosporangium roseum DSM
           43021]
          Length = 257

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 12/253 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCG--VAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
              P  +  +        +L  +   V      AI      + +             +  
Sbjct: 2   RGLPARWWSVPVALAGWELLTRWARAVYFPPPSAIAARLHEMWFSGPAARLFLTDEALGD 61

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+++    A ++ I  G+ +G    +S  + P  QL  + P     P+ +    
Sbjct: 62  VLPSLGRLLLGWSTACLVGIVAGVAVGRSARLSEYVGPLIQLGRSIPPPTLLPIFLLLFG 121

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 +      ++FG  W +L N   GA      + E A  F +   R    ++LP  
Sbjct: 122 VG----SPMQVAAIVFGVTWPVLINSADGARYVDRGYLETAQVFGVNRGRRLLLVVLPAA 177

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G   +   A    IVSE+         T G+G  +  +  +   P +   + ++
Sbjct: 178 APKIFAGLRLSVSLALIMMIVSELVG------STEGIGYRMLVAQSELDIPSMWAAITLI 231

Query: 563 CCFVLALNRFLWH 575
                 LN     
Sbjct: 232 GLLGYGLNTAFLR 244



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 17/206 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L     + L   V      +S RL   + P++ + +SIP    L   ++ F  
Sbjct: 63  LPSLGRLLLGWSTACLVGIVAGVAVGRSARLSEYVGPLIQLGRSIPPPTLLPIFLLLFGV 122

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P          + AI     W +  +       + R   E ++ F ++  ++   + +
Sbjct: 123 GSP--------MQVAAIVFGVTWPVLINSADGARYVDRGYLETAQVFGVNRGRRLLLVVL 174

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + +S+S     ++ SE++          GIG  + +A  E D+ ++  A+
Sbjct: 175 PAAAPKIFAGLRLSVSLALIMMIVSELVG------STEGIGYRMLVAQSELDIPSMWAAI 228

Query: 246 LTMLGVIFLYDQLLF---RPMIVWSN 268
             +  + +  +       R ++ W  
Sbjct: 229 TLIGLLGYGLNTAFLRVERRVLAWHP 254


>gi|299822484|ref|ZP_07054370.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Listeria grayi DSM 20601]
 gi|299816013|gb|EFI83251.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Listeria grayi DSM 20601]
          Length = 281

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVVGVPLGIWMAKSEIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  + ++L E + SF  + WQK +
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSKELVEAADSFGSTPWQKLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + I           G  W  + + +        L        T+  V+   +IA ++ +
Sbjct: 53  FILIVLAATFWINRKGKKWGLMIFELIGLLLILNLGFWRDMTQTLTLVLTSSLIALVVGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSEIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSKELVEAADSFGSTPWQKLFKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|170078356|ref|YP_001734994.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC
           7002]
 gi|169886025|gb|ACA99738.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC
           7002]
          Length = 276

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 18/238 (7%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVVLIIIA 397
            I    ++ G+     W    ++       + +  +W           ++ RV+    +A
Sbjct: 38  SILLPLILWGIISSQGWVKPLFLPTPMAVWEAITNLWASGDLQKDIIYSVLRVLTGFSLA 97

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II IP+GI +G    I +  +P   ++   PA  F PL+V           +   LL+ 
Sbjct: 98  VIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAFIPLLVLYFGVG----EIPKVLLIF 153

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            GT ++    ++      P +  E   +      +    +I P I P  +         +
Sbjct: 154 IGTLFFNTLMIMDAVKFVPKELIEATYTLGGNRPQIVIKVIFPYILPKIIDAGRVNIAAS 213

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR-FLW 574
           WN  IVSE+ +       T GLG  I+ +    +  ++  G++++    L ++  F+W
Sbjct: 214 WNLVIVSELVA------ATEGLGRRISVAQRFLNTDQIFAGLIVIGLIGLLIDLCFIW 265



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 103/244 (42%), Gaps = 20/244 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------QYASRTTLRM 72
            + L++  +++ +I   +   Q    P  +   + +   + +L       +    + LR+
Sbjct: 31  RWLLMSASILLPLILWGIISSQGWVKPLFLPTPMAVWEAITNLWASGDLQKDIIYSVLRV 90

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   ++++ +     L      +  +  PI+ I++ +P   F+   V+YF         
Sbjct: 91  LTGFSLAVIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAFIPLLVLYFGVG------ 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E+  +  IF   ++  T  +  ++  +P++L E + +   +  Q    +  P+ +P +
Sbjct: 145 --EIPKVLLIFIGTLFFNTLMIMDAVKFVPKELIEATYTLGGNRPQIVIKVIFPYILPKI 202

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    ++++  W  V+ SE++   +      G+G  I++A +  +   I   ++ +  + 
Sbjct: 203 IDAGRVNIAASWNLVIVSELVAATE------GLGRRISVAQRFLNTDQIFAGLIVIGLIG 256

Query: 253 FLYD 256
            L D
Sbjct: 257 LLID 260


>gi|184157612|ref|YP_001845951.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|332874575|ref|ZP_08442476.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
 gi|183209206|gb|ACC56604.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|332737213|gb|EGJ68139.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059]
          Length = 314

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALN 570
            L  +
Sbjct: 292 GLVCD 296



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D +L +
Sbjct: 287 IIGVIGLVCDWVLMK 301


>gi|320184675|gb|EFW59469.1| Taurine transport system permease protein TauC [Shigella flexneri
           CDC 796-83]
          Length = 218

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 13/197 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L        + PL+V     
Sbjct: 30  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGI 89

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 90  GETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 145

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 146 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 199

Query: 564 CFVLALN---RFLWHPL 577
                L    R L   L
Sbjct: 200 IIAFLLELGLRALQRRL 216



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 85/203 (41%), Gaps = 14/203 (6%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P      +L Q+ + +  R++ A++ +++           S  +  +L P++++ + +  
Sbjct: 17  PQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSP 76

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L +L   V++F           E + I  I+ +    +  S    + +  +     ++S 
Sbjct: 77  LAYLPLMVIWFGIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSL 128

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q  W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 129 GASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 182

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
            +      +L  +  +  + FL 
Sbjct: 183 GEFLATDVVLAGIAVIAIIAFLL 205


>gi|311104595|ref|YP_003977448.1| binding-protein-dependent transporter inner membrane component
           family protein 20 [Achromobacter xylosoxidans A8]
 gi|310759284|gb|ADP14733.1| binding-protein-dependent transport system inner membrane component
           family protein 20 [Achromobacter xylosoxidans A8]
          Length = 269

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 12/215 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ+   +     Y     +      ++  V +  ++A    +P+G+ +GF   I + + 
Sbjct: 54  TWQAAVQLSRDSGYAG-GTLFQHIGHSLRLVFLGFLVAIGTGVPLGLLMGFSKRIDALVG 112

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   LL   P   + PL +  +       +     L+   +    + N  AG        
Sbjct: 113 PVFSLLRPIPPLAWIPLAILWLGLG----DPAKIFLIWVSSFTPAVINTYAGVRNIDPTL 168

Query: 480 KEVASSFHIT-GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            E A         R  R +++PG  P   TG   +   AW   + +E+           G
Sbjct: 169 IEAARVHGAGNPLRMLRDVLIPGSMPMIFTGLRLSLQTAWMTLVAAELIG------AFIG 222

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG  +  +        ++  ++ +      + R L
Sbjct: 223 LGKVLDTAALDIRPGMILYAMVWVGLLGAVMTRGL 257



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 15/202 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+   +   +    ++++        L   S+R+  ++ P+  +++ IP L ++  
Sbjct: 70  GTLFQHIGHSLRLVFLGFLVAIGTGVPLGLLMGFSKRIDALVGPVFSLLRPIPPLAWIPL 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGW 177
            +++     P        A IF I+ S       + Y  + NI   L E +R     +  
Sbjct: 130 AILWLGLGDP--------AKIFLIWVSSFTPAVINTYAGVRNIDPTLIEAARVHGAGNPL 181

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P SMP +   + +S+   W  +VA+E+I          G+G  +  A  +  
Sbjct: 182 RMLRDVLIPGSMPMIFTGLRLSLQTAWMTLVAAELIG------AFIGLGKVLDTAALDIR 235

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              ILYAM+ +  +  +  + L
Sbjct: 236 PGMILYAMVWVGLLGAVMTRGL 257


>gi|262273943|ref|ZP_06051755.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Grimontia hollisae CIP 101886]
 gi|262221753|gb|EEY73066.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Grimontia hollisae CIP 101886]
          Length = 299

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +   RT   +L   ++++          A+S R+   + P+LD+MQ++P   +L   
Sbjct: 98  GMWEDTMRTMSIILVCTMLAIFLGIPIGIAMARSNRVQSAVTPLLDVMQTMPAFVYLIPV 157

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       GK+ G     I+AI       +       +  + +++ E + ++  S  Q+
Sbjct: 158 VMLLG---IGKIPGVIAVVIYAIP-----PVIRLTNLGIRLVDKEVLEAATAYGASPTQR 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  ++      VV + MI V        G+G  +  +I  Q   
Sbjct: 210 LFGVQLPLAMPTIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFT 262

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L   L ++ +  ++D++
Sbjct: 263 LGLINGLAIVALAIIFDRV 281



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 81/232 (34%), Gaps = 12/232 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L I     V  +A   +W+    +V  F       +      TM  ++V  ++A  
Sbjct: 61  TPWWLMIAILAGVSYMA-SRSWKLGVAVVVSFLAIGYFGMWEDTMRTMSIILVCTMLAIF 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 LGIPIGIAMARSNRVQSAVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGVIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A+++  +  +    + LP   P  + G       A  
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAYGASPTQRLFGVQLPLAMPTIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   ++  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLINGLAIVALAIIFDR 280


>gi|167566077|ref|ZP_02358993.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia oklahomensis EO147]
 gi|167573155|ref|ZP_02366029.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Burkholderia oklahomensis C6786]
          Length = 300

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ ++SL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 12/228 (5%)

Query: 346 IFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                +  GV +  + W+   +                  +T+   +   I++ ++ IP+
Sbjct: 50  WAMMALFIGVGLWRVGWRFAIFTALSLFLIFATGFWDQMIVTLGLTLSSTIVSLVLGIPL 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW      +++ ++P   L+   PA V+            +   L   +  +       
Sbjct: 110 GIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G      +  E   +F  T W+    +  P   P  + G       A +  I++
Sbjct: 169 ---TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|325519398|gb|EGC98803.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 172

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   + P  ++L   PA  + PL +       L+    +  +   G  + IL N +
Sbjct: 1   RYRALEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTV 56

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            GA A        A S    G   +  +ILPG  P   TG     G AW   + +E+ + 
Sbjct: 57  HGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMIAG 116

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +      G+G +  ES    ++P++V+G+ ++    +  +  +  
Sbjct: 117 QY------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 156



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 14/170 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   L+P L++++ IP + ++   ++ F          +EL+ +F  F   ++ + 
Sbjct: 1   RYRALEDTLLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 52

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +       +   L   +RS    G   +  + +P + P +   + + M   WF +V +E
Sbjct: 53  LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 112

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           MI          GIG +   +   Q+   I+  M  +  +      L+ R
Sbjct: 113 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 156


>gi|282897821|ref|ZP_06305818.1| Binding-like protein-dependent transport systems inner membrane
           component [Raphidiopsis brookii D9]
 gi|281197305|gb|EFA72204.1| Binding-like protein-dependent transport systems inner membrane
           component [Raphidiopsis brookii D9]
          Length = 287

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 86/279 (30%), Gaps = 10/279 (3%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            ++     + +  +       +    L  +    P     +     +S +L       + 
Sbjct: 1   MIKISSAETGDIPARYGVIKSRSYSRLIKLVTKNPYVQSAIPWLVPISIILIWQLLSSLG 60

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +   I    +  +           +     I+  R +   ++   I   +G+  G  P 
Sbjct: 61  VIPNRILPAPLAVLAAAIKLGASGELFRNIGISAARAISGFLVGGSIGFSLGLINGISPI 120

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               I    Q+L   P     PLV+          +     L+  G  + I  N   G  
Sbjct: 121 AEKLIDTSIQMLRNIPNLALIPLVILWFGIG----DEARLFLVSLGVMFPIYLNTFHGIR 176

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           +      E+   + +  W  +  IILPG     + G   + G  W   IV+E  +     
Sbjct: 177 SVDPGLIEMGKIYGLNAWGLFWRIILPGAMSSILVGVRFSLGIMWLTLIVAETIA----- 231

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +G+G     + E      VVL +L+  CF    +  
Sbjct: 232 -ADSGIGYMAMNAREFMQTDVVVLSILLYACFGKLADVI 269



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 96/252 (38%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +L+  +++ L             V    I L     L +    +  R +S  ++   
Sbjct: 47  ISIILIWQLLSSLGVIPNRILPAPLAVLAAAIKLGASGELFRNIGISAARAISGFLVGGS 106

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +   S     ++   + ++++IP L  +   +++F           + A +F 
Sbjct: 107 IGFSLGLINGISPIAEKLIDTSIQMLRNIPNLALIPLVILWFGIG--------DEARLFL 158

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + ++   L E+ + + L+ W  FW + +P +M  ++  +  S+ 
Sbjct: 159 VSLGVMFPIYLNTFHGIRSVDPGLIEMGKIYGLNAWGLFWRIILPGAMSSILVGVRFSLG 218

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++ ++L       L D +   
Sbjct: 219 IMWLTLIVAETIAADS------GIGYMAMNAREFMQTDVVVLSILLYACFGKLADVIAKS 272

Query: 259 LFRPMIVWSNKF 270
           L R  + W+  +
Sbjct: 273 LERYWLQWNPGY 284


>gi|84686551|ref|ZP_01014444.1| putative permease [Maritimibacter alkaliphilus HTCC2654]
 gi|84665464|gb|EAQ11941.1| putative permease [Rhodobacterales bacterium HTCC2654]
          Length = 296

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +LVIG +  L     + T+   +  ++   + V  + +    T   +  A ++ + 
Sbjct: 60  WPIILLVIGGLAWLGARDWKITIGSVVAFVL---IGVFGMWEDTMSTLAIISVATILCIA 116

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L ++S R+  ++ PILD+MQ+IP   +L   V+       GKV G     I+A
Sbjct: 117 IGIPIGILMSRSDRMQSIITPILDVMQTIPSFVYLIPVVMLLG---IGKVPGLIAVCIYA 173

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I       +       +  +  D+ E + +F  S  QK + + VP ++P +   +  ++ 
Sbjct: 174 IP-----PIVRLTNLGIRLVDADVMEAADAFGASPRQKLFGVQVPLALPNIFAGVNQTIM 228

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI V        G+G  +  AI  Q L   L   L ++ +  ++D++
Sbjct: 229 MALSMVVIASMIGV-------QGLGVPVLRAISNQYLALGLMNGLAIVALAIIFDRV 278



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 76/274 (27%), Gaps = 11/274 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +               +     L        +  +      + +    I           
Sbjct: 15  LSAMRRWIDGNFREFTRATGEALEAFFNPLLKFLVWFEDLLQATPWPIILLVIGGLAWLG 74

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              W+     V  F    V  +      T+  + V  I+   I IP+GI +     + S 
Sbjct: 75  ARDWKITIGSVVAFVLIGVFGMWEDTMSTLAIISVATILCIAIGIPIGILMSRSDRMQSI 134

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P   ++   P+ V+   VV  +        +   + +       I+     G      
Sbjct: 135 ITPILDVMQTIPSFVYLIPVVMLLGIG----KVPGLIAVCIYAIPPIVRLTNLGIRLVDA 190

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D  E A +F  +  +    + +P   P    G       A +  +++ +           
Sbjct: 191 DVMEAADAFGASPRQKLFGVQVPLALPNIFAGVNQTIMMALSMVVIASMIG-------VQ 243

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           GLG  +  +         ++  L +    +  +R
Sbjct: 244 GLGVPVLRAISNQYLALGLMNGLAIVALAIIFDR 277


>gi|320539791|ref|ZP_08039450.1| putative taurine transporter subunit [Serratia symbiotica str.
           Tucson]
 gi|320029977|gb|EFW11997.1| putative taurine transporter subunit [Serratia symbiotica str.
           Tucson]
          Length = 278

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++  ++ A II IPVG  +G    +   + P  ++    P   + PL+V      
Sbjct: 85  ASLGRIMAALLAAVIIGIPVGFAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+       +  + +AG  +        A +     W+  R+++LP   P
Sbjct: 145 ETSK----ILLISLAIFAPVTLSAMAGVRSVARVRVRAARTLGANRWQVLRFVVLPSALP 200

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G  W+  + +E+ +       T GLG  +  + E  +   ++ G+ ++  
Sbjct: 201 EMLTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGELLATDVLLAGIGVIAI 254

Query: 565 FVLALN---RFLWHPLYLY 580
               L    R L   L  +
Sbjct: 255 IAFGLELGLRTLQRRLTPW 273



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 100/247 (40%), Gaps = 22/247 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYASRTTLRMLSAMVISLLFT 83
            G+  +          P+ ++  + I          +L Q+   +  R+++A++ +++  
Sbjct: 42  WGVAALHWVSPLFLPAPQQVLHQLIIIASPQGFMNATLWQHLVASLGRIMAALLAAVIIG 101

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                    +  +  +L P+++I + +P L +L   V++F      K++   LA      
Sbjct: 102 IPVGFAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLISLAIFA--- 158

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T S    + ++ R     +R+   + WQ   ++ +P ++P ++  + + +  G
Sbjct: 159 -----PVTLSAMAGVRSVARVRVRAARTLGANRWQVLRFVVLPSALPEMLTGIRIGLGVG 213

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLF 260
           W  +VA+E+I          G+G  +  A +      +L  +  +  + F  +   + L 
Sbjct: 214 WSTLVAAELIA------ATRGLGFMVQSAGELLATDVLLAGIGVIAIIAFGLELGLRTLQ 267

Query: 261 RPMIVWS 267
           R +  W 
Sbjct: 268 RRLTPWH 274


>gi|294055605|ref|YP_003549263.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
 gi|293614938|gb|ADE55093.1| binding-protein-dependent transport systems inner membrane
           component [Coraliomargarita akajimensis DSM 45221]
          Length = 461

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V +   +A++I +P+GI  G     S   +PF       PA  F  L+V+      
Sbjct: 241 SLKIVFMGFFMAALIGVPIGILCGTFDFFSRLFEPFIDFFRYMPAPAFSTLLVAIF---- 296

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L  +     L+  GT + ++  V            E A +         R +I+PGI P 
Sbjct: 297 LAHDAPKIALVFVGTFFQLVLVVANTTRQLDTSLIEAAQTLGAKNVTLIRRVIIPGITPN 356

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   +++E+          +GL  ++       +F  V   ++++   
Sbjct: 357 LFNDLRILLGWAWTWLVIAELIG------VKSGLTEFLETQGRWRNFDSVFPIIILIGIT 410

Query: 566 VLALNRFL 573
               ++ L
Sbjct: 411 GFTTDQIL 418



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   +     ++ L       L         +  P +D  + +P   F T  V  F+  
Sbjct: 240 HSLKIVFMGFFMAALIGVPIGILCGTFDFFSRLFEPFIDFFRYMPAPAFSTLLVAIFLA- 298

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   +   I  +F    + +   +  +   +   L E +++           + +P
Sbjct: 299 -------HDAPKIALVFVGTFFQLVLVVANTTRQLDTSLIEAAQTLGAKNVTLIRRVIIP 351

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P L  ++ + +   W ++V +E+I V        G+  ++    + ++  ++   ++
Sbjct: 352 GITPNLFNDLRILLGWAWTWLVIAELIGVKS------GLTEFLETQGRWRNFDSVFPIII 405

Query: 247 TMLGVIFLYDQLL 259
            +    F  DQ+L
Sbjct: 406 LIGITGFTTDQIL 418


>gi|58616488|ref|YP_195617.1| putative taurine transport system permease protein [Azoarcus sp.
           EbN1]
 gi|56315950|emb|CAI10593.1| putative taurine transport system permease protein [Aromatoleum
           aromaticum EbN1]
          Length = 269

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   +++  I  + +GI +G    I +   P        P +   PL++     
Sbjct: 76  AASLTRLFWGMLLGGIPALLLGIVMGLYRPIRAVFDPLVAATYPIPKSAILPLILLIFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +++  G  + +L N +AG       + +V  +F  + W+ +R I LPG  
Sbjct: 136 GEASK----IVMVATGVFYPVLINSMAGVMEINKIYLDVGHNFKASRWQVFRTIALPGAM 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G       ++E+          +GLG  I  + E  S   + +G++++ 
Sbjct: 192 PLIMTGVKLGVGLGLILITIAEMVG------ANSGLGHMIWNAWEILSVETMYVGLIVIA 245

Query: 564 CFVLAL 569
                 
Sbjct: 246 LLGFLF 251



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 96/259 (37%), Gaps = 18/259 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGI-INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +R     I   LA +++  + +       +    P  +   +   +   SL    + +  
Sbjct: 21  NRDRLIGIVSPLALIVLWELCVQSGAIDARFFPAPSQVAVKLVALVVSGSLWTDTAASLT 80

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+   M++  +   +   +    R +  V  P++     IP    L   ++ F       
Sbjct: 81  RLFWGMLLGGIPALLLGIVMGLYRPIRAVFDPLVAATYPIPKSAILPLILLIFGLG---- 136

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + I  + T   + +  +    +  I +   +V  +F+ S WQ F  + +P +MP
Sbjct: 137 ----EASKIVMVATGVFYPVLINSMAGVMEINKIYLDVGHNFKASRWQVFRTIALPGAMP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + + +  G   +  +EM+          G+G  I  A +   +  +   ++ +  
Sbjct: 193 LIMTGVKLGVGLGLILITIAEMVGANS------GLGHMIWNAWEILSVETMYVGLIVIAL 246

Query: 251 VIFLYDQL---LFRPMIVW 266
           + FL+      L R ++ W
Sbjct: 247 LGFLFSLALTELERWLVPW 265


>gi|17989144|ref|NP_541777.1| nitrate transport permease protein NRTB [Brucella melitensis bv. 1
           str. 16M]
 gi|265989786|ref|ZP_06102343.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993105|ref|ZP_06105662.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|17984995|gb|AAL54041.1| nitrate transport permease protein nrtb [Brucella melitensis bv. 1
           str. 16M]
 gi|262763975|gb|EEZ10007.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263000455|gb|EEZ13145.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
          Length = 284

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 95  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 153 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 211 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEARSLYDLEKLFAGVAILSVM 264

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 265 GLIVNVVI-----GWVERRF 279



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILEARSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|187926196|ref|YP_001892541.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241665685|ref|YP_002984044.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187727950|gb|ACD29114.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240867712|gb|ACS65372.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 298

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 90/224 (40%), Gaps = 10/224 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            D V  +   L   +L      +   +L+   + L  +     L   +R     L  +  
Sbjct: 79  SDTVQALWAGLASGTLFARIGTSMQTLLAGYALGLALSCALVVLGISNRLGQDFLETLTA 138

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +V+F             + IF I  S VW ++ + +    ++   L
Sbjct: 139 MFNPLPAIALLPIALVWFGLGNG--------SLIFVIVHSVVWAVSLNTHAGFLSVSNTL 190

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
             V R++ LSG      + +P + P ++  + +  +  W  ++ASE++    +     G+
Sbjct: 191 RMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASELVFGVSS--GQGGL 248

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           G YI     +  +  +   +LT++ +  L + L+FR +   + K
Sbjct: 249 GWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTLEARTVK 292



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 98/286 (34%), Gaps = 16/286 (5%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +SN        +   R    E  L +         L      VV  +      + +   +
Sbjct: 14  ISNRAPVYSTPVAFERIGVVEKPLSVAERLYEQAWLRKVVILVVLALVWEGGARWLDNPL 73

Query: 369 NHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIG--------FRPHISSKI 418
              T+ D +  +W G    T+F  +   +   +    +G+ +                 +
Sbjct: 74  LLPTFSDTVQALWAGLASGTLFARIGTSMQTLLAGYALGLALSCALVVLGISNRLGQDFL 133

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +    +    PA    P+ +      + +    L  +++    W +  N  AG  +  N 
Sbjct: 134 ETLTAMFNPLPAIALLPIALVWFGLGNGS----LIFVIVHSVVWAVSLNTHAGFLSVSNT 189

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +     G
Sbjct: 190 LRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQGG 247

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           LG YI E+  +   PEV  G+L +    L +   ++  L     + 
Sbjct: 248 LGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTLEARTVKR 293


>gi|239916800|ref|YP_002956358.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|281414739|ref|ZP_06246481.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|239838007|gb|ACS29804.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
          Length = 289

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 99/249 (39%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL   +    L    +   P  ++      L+   L  +   +T R+L   ++    
Sbjct: 55  VLLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHVGISTQRVLLGFLLGAAL 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                +    SR    +  P++  ++++P L ++   +++       KV    + A F +
Sbjct: 115 GLAVGSALGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPV 174

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           FT+        +Y +L ++   L E  R+F   G      + +P  +P +   + ++++ 
Sbjct: 175 FTT--------VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQ 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  +  +        ++ A++ +  +  L D LL   
Sbjct: 227 AWLFLVAAELIASS------MGLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLLGLL 280

Query: 261 --RPMIVWS 267
             R +  W+
Sbjct: 281 ERRALRRWA 289



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 87/232 (37%), Gaps = 11/232 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +L ++W     G+   +   S G +++      +   +     I+  RV++  ++ + + 
Sbjct: 56  LLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHVGISTQRVLLGFLLGAALG 115

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + VG  +G      +   P    L A P+  + PL++  +     +       L+  G  
Sbjct: 116 LAVGSALGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESK----VTLIAIGAF 171

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +   V A          E   +F   G    R + LP + P   +G   A   AW   
Sbjct: 172 FPVFTTVYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFL 231

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +E+ +       + GLG  + +S   G    ++L ++++       +  L
Sbjct: 232 VAAELIA------SSMGLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLL 277


>gi|66047934|ref|YP_237775.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|71734104|ref|YP_276848.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257483034|ref|ZP_05637075.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624806|ref|ZP_06457760.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650617|ref|ZP_06481960.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298489209|ref|ZP_07007228.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|63258641|gb|AAY39737.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|71554657|gb|AAZ33868.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298156291|gb|EFH97392.1| L-proline/glycine/betaine ABC transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320326406|gb|EFW82459.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320330619|gb|EFW86597.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330871164|gb|EGH05873.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330954941|gb|EGH55201.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae Cit 7]
 gi|330970917|gb|EGH70983.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|330985873|gb|EGH83976.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331011730|gb|EGH91786.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 281

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  FVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L+       T+ +V+   ++  +I +P+GI    +P   + I+P
Sbjct: 69  WGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 LLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|282900728|ref|ZP_06308670.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
 gi|281194528|gb|EFA69483.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
          Length = 263

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+   ++A++I IP+G+ +G  P + + ++P   +    PA  F P+++     
Sbjct: 71  GFSLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLEPAISIFRYMPAPAFIPMLILYFGL 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     LL+  GT ++    ++        +  E + +      +    +ILP I 
Sbjct: 131 GET----PKILLIFIGTVFFNTLMIMDAVKFVSRELIETSYTLGGQNHQILLQVILPFIV 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +         +WN  IV+E+ +       T G+G  I+ +       E+  G++++ 
Sbjct: 187 PNIIDACRVNMAASWNLVIVAELVA------ATEGIGRRISVAQRFLKTDEIFAGLIVIG 240

Query: 564 CFVLALNRFL 573
              + ++  L
Sbjct: 241 LIGVVIDILL 250



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 87/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ ++  +        L      + LR+L   +++ + +     L      +  +L 
Sbjct: 47  LPTPQAVLAALQKLWATGDLQTDIGFSLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLE 106

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + I + +P   F+   ++YF      K        I  IF   V+  T  +  ++  +
Sbjct: 107 PAISIFRYMPAPAFIPMLILYFGLGETPK--------ILLIFIGTVFFNTLMIMDAVKFV 158

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R+L E S +      Q    + +PF +P ++    ++M+  W  V+ +E++   +    
Sbjct: 159 SRELIETSYTLGGQNHQILLQVILPFIVPNIIDACRVNMAASWNLVIVAELVAATE---- 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  I++A +      I   ++ +  +  + D LL
Sbjct: 215 --GIGRRISVAQRFLKTDEIFAGLIVIGLIGVVIDILL 250


>gi|297582679|ref|YP_003698459.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297141136|gb|ADH97893.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 284

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 96/236 (40%), Gaps = 16/236 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++V+  +       ++  +P   +  + +  +   L +    T   +L A V+S++ 
Sbjct: 56  ALIIIVLVAVIAYFLNGRKLGLPIFTIFGLLLIFNQG-LWEELMYTFTLVLLASVLSVII 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
              +  L +KS     ++ P+LD MQ++P   +L   V +F     G V G   + IFA 
Sbjct: 115 GVPFGILMSKSDTAEAIMKPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASLIFAT 171

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +P ++ E S +F  +  QK + + +P +   ++  +  ++  
Sbjct: 172 P-----PTVRLTNLGIRQVPTEMVEASDAFGSTPAQKLFKVELPMAKVTIMAGINQTVML 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++   +     A + ++ +  + D+ 
Sbjct: 227 ALSMVVIASMI-------GAPGLGREVLSALQRAQVGPGFTAGIAIVILAIIIDRF 275



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 73/257 (28%), Gaps = 16/257 (6%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                   +SN V  +      I       F    +              +V    I   
Sbjct: 10  PQIPISEAVSNAVAWITDVFSFIFGPIRSGFGDFMTWFADLLYAVPALIIIVLVAVIAYF 69

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                  +  FT   +L +   G       T   V++  +++ II +P GI +       
Sbjct: 70  LNGRKLGLPIFTIFGLLLIFNQGLWEELMYTFTLVLLASVLSVIIGVPFGILMSKSDTAE 129

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + ++P    +   PA V+    V+      +       +          +     G    
Sbjct: 130 AIMKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASLIF----ATPPTVRLTNLGIRQV 185

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P +  E + +F  T  +    + LP      + G       A +  +++ +         
Sbjct: 186 PTEMVEASDAFGSTPAQKLFKVELPMAKVTIMAGINQTVMLALSMVVIASMIG------- 238

Query: 536 TTGLGAYIAESTEKGSF 552
             GLG  +  + ++   
Sbjct: 239 APGLGREVLSALQRAQV 255


>gi|145295361|ref|YP_001138182.1| hypothetical protein cgR_1299 [Corynebacterium glutamicum R]
 gi|140845281|dbj|BAF54280.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 256

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    ++  RV++   + +++ I +G+  G      + + P  Q   A P     PL
Sbjct: 57  GTLLDALLVSSQRVLLGFALGAVLGISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPL 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       L       L++  G  + +  N  +G         E         ++  R 
Sbjct: 117 FIIWFGIGEL----PKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGHVMGFGFFQRLRT 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P   P    G   A   AW + IV+E  +         GLG  I  + +      V+
Sbjct: 173 IIIPSAAPQLFVGLRQASAAAWLSLIVAEQVN------AREGLGFLINNARDFYRTDLVI 226

Query: 557 LGVLIMCCFVLALNRFL 573
            G+++     L     +
Sbjct: 227 FGLIVYATLGLLSEALI 243



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 73/218 (33%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I+          +L      ++ R+L    +  +       L    R     + 
Sbjct: 40  LPAPTTILAAGWEVATNGTLLDALLVSSQRVLLGFALGAVLGISLGVLTGMFRFADTAVD 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++   +++P LG +   +++F           EL  +  I    ++ +  +       I
Sbjct: 100 PLIQAARALPHLGLVPLFIIWFGIG--------ELPKVLIISLGVLYPLYLNTASGFRQI 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E         +Q+   + +P + P L   +  + +  W  ++ +E +        
Sbjct: 152 DPKLLEAGHVMGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLIVAEQV------NA 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A        +++ ++    +  L + L+
Sbjct: 206 REGLGFLINNARDFYRTDLVIFGLIVYATLGLLSEALI 243


>gi|108762126|ref|YP_630471.1| glycine betaine/L-proline ABC transporter permease [Myxococcus
           xanthus DK 1622]
 gi|108466006|gb|ABF91191.1| glycine betaine/L-proline ABC transporter, permease protein
           [Myxococcus xanthus DK 1622]
          Length = 277

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 16/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +I ++ +L   +            + +  D+  L +    T   +LS+ +++L+      
Sbjct: 51  IITVLMVLAWRLSGLGTAVFTALGMLLIQDMG-LWKATMETLALVLSSAMVALVLGIPLG 109

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             AA SR +  VL P LD+MQ++P   +L   V++F     GKV G     IFA+  +  
Sbjct: 110 IWAAYSRVVERVLRPALDLMQTMPAFVYLIPAVLFFRL---GKVPGVVATVIFAMPPA-- 164

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +  +P ++ E + +F  +  Q    + +P ++P L+  +  ++      V
Sbjct: 165 ---VRLTNLGIRQVPTEVVEAAIAFGATPRQTLLNVQLPIAVPTLLAGVNQTIMLSLSMV 221

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V S MI  G       G+G  +   I +  +     + + ++ +  + D+L
Sbjct: 222 VISAMIGAG-------GLGEQVLKGITQLRIGLGFESGIAVVILAIVLDRL 265



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
             +  V + +AW+  G     FT   +L +  +G       T+  V+   ++A ++ IP+
Sbjct: 49  YAIITVLMVLAWRLSGLGTAVFTALGMLLIQDMGLWKATMETLALVLSSAMVALVLGIPL 108

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW  +   +   ++P   L+   PA V+    V       +   +   +  +       
Sbjct: 109 GIWAAYSRVVERVLRPALDLMQTMPAFVYLIPAVLFFRLGKVPGVVATVIFAMPPAVRL- 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G    P +  E A +F  T  +    + LP   P  + G       + +  ++S
Sbjct: 168 ---TNLGIRQVPTEVVEAAIAFGATPRQTLLNVQLPIAVPTLLAGVNQTIMLSLSMVVIS 224

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  + +   +          + +    + L+R 
Sbjct: 225 AMIGAG-------GLGEQVLKGITQLRIGLGFESGIAVVILAIVLDRL 265


>gi|311104602|ref|YP_003977455.1| binding-protein-dependent transporter inner membrane component
           family protein 21 [Achromobacter xylosoxidans A8]
 gi|310759291|gb|ADP14740.1| binding-protein-dependent transport system inner membrane component
           family protein 21 [Achromobacter xylosoxidans A8]
          Length = 270

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 27/272 (9%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI----------TLD 57
           P  + RR+        A V V+ +   L  G  E      +   V               
Sbjct: 11  PAPVRRRLSLRWLVSGASVAVLLLAWYLATGPLELLSAVQLPSPVDAWDALLEIAGEGYA 70

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L Q+ + +T  +L     + L       L  +SR +   + P+  I++ I  + ++ 
Sbjct: 71  DGTLLQHITSSTGLVLYGFAAAALTGVPLGILMGQSRLVEAYVNPVFQIVRPIAPIAWIP 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            T+++F             A +F I+ +       + Y  + NI   L + +R     G 
Sbjct: 131 LTILWFGLG--------TSAKVFVIWLAAFAPTVINTYTGVRNIDDTLIQAARVNGAVGR 182

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + VP ++P +   +  S+   W  +VA+E++          G+G  + +A ++ +
Sbjct: 183 RMLLDVIVPGALPAIFTGLRTSLQACWMVLVAAELVG------SFIGLGHVLIIATRDLN 236

Query: 238 LLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              I+ AM  + G+  L   LL    R ++ W
Sbjct: 237 SGMIVVAMAAVAGMGMLMSALLAQIERRVMPW 268



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 83/260 (31%), Gaps = 12/260 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R    +R+      + +           +     V   +   AW ++   +    Y
Sbjct: 11  PAPVRRRLSLRWLVSGASVAVLLLAWYLATGPLELLSAVQLPSPVDAWDAL-LEIAGEGY 69

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     +   V+     A++  +P+GI +G    + + + P  Q++       +
Sbjct: 70  AD-GTLLQHITSSTGLVLYGFAAAALTGVPLGILMGQSRLVEAYVNPVFQIVRPIAPIAW 128

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +                ++        + N   G     +   + A      G R 
Sbjct: 129 IPLTILWFGLG----TSAKVFVIWLAAFAPTVINTYTGVRNIDDTLIQAARVNGAVGRRM 184

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +I+PG  P   TG  T+    W   + +E+           GLG  +  +T   +  
Sbjct: 185 LLDVIVPGALPAIFTGLRTSLQACWMVLVAAELVG------SFIGLGHVLIIATRDLNSG 238

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +V+ +  +    + ++  L
Sbjct: 239 MIVVAMAAVAGMGMLMSALL 258


>gi|194017644|ref|ZP_03056255.1| glycine betaine transport system permease protein opuAB [Bacillus
           pumilus ATCC 7061]
 gi|194010916|gb|EDW20487.1| glycine betaine transport system permease protein opuAB [Bacillus
           pumilus ATCC 7061]
          Length = 284

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 18/231 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFVYA 87
           I+ ++  GI      R I     I   +     Y     +T   +L+A+VIS++      
Sbjct: 56  ILTLIFAGIAWWISTRGIALFTLIGFLLIDYLGYWHPMLQTLALVLTAVVISIVIGVPIG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IF      +
Sbjct: 116 IWASQKETVRKIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIF-----SM 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +  +P DL E + +F  + +Q+ + + +P +   ++  +  S+      V
Sbjct: 168 PPTIRMTILGIKQVPADLIEATEAFGSTTFQRLFKVQLPLATKTILAGINQSIMLALSMV 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + M+         PG+GS +  A+ +        A + ++ V    D++
Sbjct: 228 VIAAMV-------GAPGLGSEVYSAVTQLKTGIGFEAGIAIVIVAITLDRI 271



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 86/235 (36%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
           +L +    ++  +  GIAW      +  FT    L + +LG       T+  V+  ++I+
Sbjct: 48  VLGVIPSIILTLIFAGIAWWISTRGIALFTLIGFLLIDYLGYWHPMLQTLALVLTAVVIS 107

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GIW   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 108 IVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 165

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +   I G    P D  E   +F  T ++    + LP      + G   +   A
Sbjct: 166 --SMPPTIRMTILGIKQVPADLIEATEAFGSTTFQRLFKVQLPLATKTILAGINQSIMLA 223

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +          + +    + L+R 
Sbjct: 224 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGIGFEAGIAIVIVAITLDRI 271


>gi|167033367|ref|YP_001668598.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166859855|gb|ABY98262.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 282

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +L +  + +L       L A       +L+P+LD+MQ++P   +L   
Sbjct: 90  GLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAFVYLIPV 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ A+FA     +  +       L  I   L + +     S WQ+
Sbjct: 150 LMLFGLG--------KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQR 201

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  S+      VV + MI          G+G  +   I+  ++ 
Sbjct: 202 LRRIALPLALPSIMAGLNQSVMMALSMVVVASMI-------GARGLGEDVLAGIQTLNVG 254

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  + D++
Sbjct: 255 QGVQAGLAIVALAMVIDRI 273



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 11/206 (5%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V    +  +L +      T+  V+V   +  ++ +P+GI +  RP     + P   ++ 
Sbjct: 79  LVALLAFIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQ 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             PA V+   V+           +      +      ++     G S       + A   
Sbjct: 139 TLPAFVYLIPVLMLFGLG----KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGL 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+  R I LP   P  + G   +   A +  +V+ +           GLG  +   
Sbjct: 195 GASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIG-------ARGLGEDVLAG 247

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +  + V   L +    + ++R 
Sbjct: 248 IQTLNVGQGVQAGLAIVALAMVIDRI 273


>gi|284045270|ref|YP_003395610.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949491|gb|ADB52235.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 280

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R  + ++I   + + +GI  G        +    Q L   P     PL +  +  
Sbjct: 84  AISLTRCALGLLIGIPVGLALGIAAGLFKLGEELVDATMQALRTVPFVSLIPLFILWLGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ FG  + +  N  AG         E A  F +   +  R +++PG  
Sbjct: 144 GDTSK----IALIAFGVTFPVYMNTYAGIRGVDAKLIEAAEVFGLNRRQLVRQVVVPGAL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI-- 561
           P  + G   A G +  A +VSE  +         G+GA ++++ +      V++G+L+  
Sbjct: 200 PSILVGLRYALGLSVIALVVSETVN------ANNGIGALVSDARQFLQTEVVLVGILVYS 253

Query: 562 -MCCFVLALNRFLWHPLYLY 580
            +        R L   L  +
Sbjct: 254 ALGLIGDGAIRLLERRLLSW 273



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 91/253 (35%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA + +  +   L L        P ++       L    L    + +  R    ++I + 
Sbjct: 40  LALLGLWQLAAALDLIDTTLVPPPSEVASAFWDLLTSGRLADALAISLTRCALGLLIGIP 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   A   +    ++   +  ++++P +  +   +++       K        I  
Sbjct: 100 VGLALGIAAGLFKLGEELVDATMQALRTVPFVSLIPLFILWLGIGDTSK--------IAL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  + Y  +  +   L E +  F L+  Q    + VP ++P ++  +  ++ 
Sbjct: 152 IAFGVTFPVYMNTYAGIRGVDAKLIEAAEVFGLNRRQLVRQVVVPGALPSILVGLRYALG 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                +V SE +   +      GIG+ ++ A +      +L  +L    +  + D   +L
Sbjct: 212 LSVIALVVSETVNANN------GIGALVSDARQFLQTEVVLVGILVYSALGLIGDGAIRL 265

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W   FR
Sbjct: 266 LERRLLSWRGSFR 278


>gi|116671627|ref|YP_832560.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611736|gb|ABK04460.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 257

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V +I A +I +  G+ IG    + + ++P  +   A P  V  P+++  +    
Sbjct: 59  SIGRLAVGVIAAIVIGVVGGVLIGSVRWLRALLEPTLEFFRAIPPPVLVPVLMLLMGITD 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++I G  W +L N I G  A      + + ++ I GW   RY++LP   P 
Sbjct: 119 S----MKVVVIISGCVWPVLLNTIEGVRAVDPVLSDSSHTYGIDGWARVRYLVLPSASPQ 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +        ++SE+ +       ++GLG  I +     + PE+  G++++   
Sbjct: 175 IMAGVRQSMSLGLILMVISEMFA------SSSGLGFTIVQFQRSFAIPEMWSGIVVLGLL 228

Query: 566 VLALNRFLWHPLYLYGTR 583
            + +       ++ +  R
Sbjct: 229 GVGM-----SFIFQWAER 241



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 78/204 (38%), Gaps = 17/204 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+   ++ +++   V   L    R L  +L P L+  ++IP    +   ++    
Sbjct: 57  LPSIGRLAVGVIAAIVIGVVGGVLIGSVRWLRALLEPTLEFFRAIPPPVLVPVLMLLMGI 116

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    +   +  I +  VW +  +  + +  +   L + S ++ + GW +  YL +
Sbjct: 117 --------TDSMKVVVIISGCVWPVLLNTIEGVRAVDPVLSDSSHTYGIDGWARVRYLVL 168

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  +  SMS G   +V SEM           G+G  I    +   +  +   +
Sbjct: 169 PSASPQIMAGVRQSMSLGLILMVISEMFASSS------GLGFTIVQFQRSFAIPEMWSGI 222

Query: 246 LTMLGVIFLYDQLL---FRPMIVW 266
           + +  +      +     R ++ W
Sbjct: 223 VVLGLLGVGMSFIFQWAERNILRW 246


>gi|261407641|ref|YP_003243882.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284104|gb|ACX66075.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 269

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 17/253 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----- 384
                   + +   L       +   A G  W S   +    T       +         
Sbjct: 13  RDWLKAIPKPLHAWLVPAAIVALWQAAGGFGWISASLLPTPLTIAKQFANLGASGELWEH 72

Query: 385 --ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I++ R +   ++  +  + +G+  G        + P  Q+L   P     PL +    
Sbjct: 73  FRISLLRALSGFLLGGLTGLALGLSTGLGKMAERTLDPSFQMLRTVPLLSLIPLFILWFG 132

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +      L++  G  + I  N   G  +      EV+  F  +  +    +I+P  
Sbjct: 133 IGEFSK----ILMISLGAFFPIYVNTFLGIRSVDAKLYEVSRIFQYSKLQLLIRLIVPAA 188

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G   + G +W   +V+E+         + G+G  I ++        V +G++I 
Sbjct: 189 LPNILLGIRLSLGVSWLVLVVAEMMG------TSAGIGYMIQDARAYSQTDIVFVGIIIF 242

Query: 563 CCFVLALNRFLWH 575
                  +  +  
Sbjct: 243 AVVGKLCDSVVRR 255



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I            L ++   + LR LS  ++  L            +     L 
Sbjct: 50  LPTPLTIAKQFANLGASGELWEHFRISLLRALSGFLLGGLTGLALGLSTGLGKMAERTLD 109

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P   +++++P+L  +   +++F      K++   L A F I+         + +  + ++
Sbjct: 110 PSFQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYV--------NTFLGIRSV 161

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L EVSR F+ S  Q    L VP ++P ++  + +S+   W  +V +EM+        
Sbjct: 162 DAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMMGTSA---- 217

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFR 271
             GIG  I  A        +   ++    V  L D ++ R    ++ W   ++
Sbjct: 218 --GIGYMIQDARAYSQTDIVFVGIIIFAVVGKLCDSVVRRLESRLLGWRETYK 268


>gi|8650112|gb|AAF78098.1|AF111939_2 inner membrane protein [Sinorhizobium meliloti]
          Length = 285

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 102/238 (42%), Gaps = 16/238 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  +++++  + +     +  ++   +  ++  T+ V  +     +T   ML A ++S+
Sbjct: 49  GLPWWLVILAFMALACRSSRRWSLTLAVCALLE-TVGVLGIWDLTMQTLALMLMATIVSV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L AKSR +  + +P+LD+MQ++P   +L   ++ F           ++ AI 
Sbjct: 108 VIGVPMGILVAKSRVVRNITLPVLDVMQTMPSFVYLIPALMLFGLG--------KVPAIL 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     V  +       +  +  ++ E + +F  S  Q  + + +P + P ++  +  ++
Sbjct: 160 ATIIYAVPPLIRLTDLGIRQVDAEVVEAATAFGGSPGQILFGVELPLATPTIMAGLNQTI 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+G  +   I+  D+   L A + ++ +  + D++
Sbjct: 220 MMALSMVVVASMI-------GARGLGEQVLNGIQTLDVGKGLEAGIGIVILAVVLDRI 270



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 74/234 (31%), Gaps = 11/234 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R      +    +         W     +        VL +  L   T+  +++  I++ 
Sbjct: 48  RGLPWWLVILAFMALACRSSRRWSLTLAVCALLETVGVLGIWDLTMQTLALMLMATIVSV 107

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I +P+GI +     + +   P   ++   P+ V+    +           +   L  I 
Sbjct: 108 VIGVPMGILVAKSRVVRNITLPVLDVMQTMPSFVYLIPALMLFGLG----KVPAILATII 163

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +  E A++F  +  +    + LP   P  + G       A 
Sbjct: 164 YAVPPLIRLTDLGIRQVDAEVVEAATAFGGSPGQILFGVELPLATPTIMAGLNQTIMMAL 223

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +V+ +           GLG  +    +     + +   + +    + L+R 
Sbjct: 224 SMVVVASMIG-------ARGLGEQVLNGIQTLDVGKGLEAGIGIVILAVVLDRI 270


>gi|169629302|ref|YP_001702951.1| sulfonate ABC transporter, permease protein SsuC [Mycobacterium
           abscessus ATCC 19977]
 gi|169241269|emb|CAM62297.1| Sulfonate ABC transporter, permease protein SsuC [Mycobacterium
           abscessus]
          Length = 277

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 84/269 (31%), Gaps = 10/269 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +  + +            +     +  +     ++ +L          +   I     
Sbjct: 7   LVAAAATDSDAPESGPSRREWVLERRWEIVRFLSPLAVLLIWQAGSAWGLIDPDILPAPS 66

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                 F       +     ++  R    +++  +I + +G  +G      + + P  Q+
Sbjct: 67  TIARAGFELIANGQLAEALRVSGVRAAEGLLLGGVIGVVLGAAVGLSRLADAVVDPTMQM 126

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           + A P     PL +       L       L++  G  + +  N  +          E A 
Sbjct: 127 IRALPHLGLIPLFIVWFGIGEL----PKVLMVALGAAFPLYLNTTSAIRQVDPKLFETAQ 182

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               + W+  R I++PG  P  + G   +   +W   IV+E  +         G+G  I 
Sbjct: 183 VLGFSFWQRLRVIVIPGATPQVLVGLRQSLALSWLTLIVAEQIN------ADAGVGFLIN 236

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +      ++ G+++     +  +  +
Sbjct: 237 NARDFLRIDVIIFGLVVYALLGIVTDAIV 265



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 102/264 (38%), Gaps = 22/264 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQYASR 67
           +    ++++ F+  + ++ I   G             P  I       +    L +    
Sbjct: 28  VLERRWEIVRFLSPLAVLLIWQAGSAWGLIDPDILPAPSTIARAGFELIANGQLAEALRV 87

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R    +++  +   V       SR    V+ P + +++++P LG +   +V+F    
Sbjct: 88  SGVRAAEGLLLGGVIGVVLGAAVGLSRLADAVVDPTMQMIRALPHLGLIPLFIVWFGIGE 147

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+   L A F         +  +   ++  +   L E ++    S WQ+   + +P 
Sbjct: 148 LPKVLMVALGAAF--------PLYLNTTSAIRQVDPKLFETAQVLGFSFWQRLRVIVIPG 199

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  +  S++  W  ++ +E I          G+G  I  A     +  I++ ++ 
Sbjct: 200 ATPQVLVGLRQSLALSWLTLIVAEQI------NADAGVGFLINNARDFLRIDVIIFGLVV 253

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFR 271
              +  + D ++ R +   + ++R
Sbjct: 254 YALLGIVTDAIV-RVLERRALRYR 276


>gi|254409551|ref|ZP_05023332.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196183548|gb|EDX78531.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 282

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 24/262 (9%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F+    +  K L  TL V+    P     L S+          W   +        WQ+I
Sbjct: 25  FWRIAEDIPKSLTWTLMVLSIGIPFGLWWLVSHSG--------WVEPLFLPTPENVWQAI 76

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +         +        ++FRV+   ++A++I IP+G ++G    I + ++P   +
Sbjct: 77  VSLWTSGDLPQDI------VASVFRVLCGFLLAALISIPLGTFMGTFASIRALMEPIIGI 130

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA  F PL++               LL+  GT ++    ++      P +  E + 
Sbjct: 131 VRYMPAPAFIPLLILYFGVGETPK----ILLIFIGTLFFNTLMIMDSVKFVPKELIETSY 186

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +      +    +I P I P  +         +WN  IV+E+ +       T GLG  I+
Sbjct: 187 TLGGKRHQVLLNVIFPFILPSIIDACRVNIAASWNLVIVAELVA------ATEGLGRRIS 240

Query: 545 ESTEKGSFPEVVLGVLIMCCFV 566
            +       ++  G++++    
Sbjct: 241 VAQRFLRTDQIFAGLIVIGLIG 262



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 84/211 (39%), Gaps = 14/211 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++   +        LPQ    +  R+L   +++ L +    T       +  ++ 
Sbjct: 66  LPTPENVWQAIVSLWTSGDLPQDIVASVFRVLCGFLLAALISIPLGTFMGTFASIRALME 125

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ I++ +P   F+   ++YF      K        I  IF   ++  T  +  S+  +
Sbjct: 126 PIIGIVRYMPAPAFIPLLILYFGVGETPK--------ILLIFIGTLFFNTLMIMDSVKFV 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L E S +      Q    +  PF +P ++    ++++  W  V+ +E++        
Sbjct: 178 PKELIETSYTLGGKRHQVLLNVIFPFILPSIIDACRVNIAASWNLVIVAELVA------A 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             G+G  I++A +      I   ++ +  + 
Sbjct: 232 TEGLGRRISVAQRFLRTDQIFAGLIVIGLIG 262


>gi|226944257|ref|YP_002799330.1| aliphatic sulfonates ABC transporter inner membrane component
           [Azotobacter vinelandii DJ]
 gi|226719184|gb|ACO78355.1| aliphatic sulfonates ABC transporter, inner membrane component
           [Azotobacter vinelandii DJ]
          Length = 284

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 87/274 (31%), Gaps = 13/274 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +      + R+                  + + W        I     +    + 
Sbjct: 12  AGRLSRQWIGDRLARYGAGWKTPDFARRLASPLAILLLWELAAQTGLIPARVIAAPSAIG 71

Query: 370 HFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              +  +    +     +++ R V  + I   I     +  G        +    Q+L  
Sbjct: 72  ETLWAMIASGELGRHLAVSLQRAVSGLAIGVGIGTVAALISGLSRRGELVLDSPMQMLRT 131

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    PL +                L++ GT + +  N+ AG         E A++  
Sbjct: 132 VPSLALVPLFILWFGIG----EFTKIALIVMGTTFPVYLNLFAGIRNIDPKLVEAANTLG 187

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +       ++ILPG  P +  G   + G +W A +  E  +       T G+G   +++ 
Sbjct: 188 LNRRELIWHVILPGALPSFFVGLRYSLGISWLALVFVEQIN------ATAGIGFLASDAR 241

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           +      +V+ +LI     L ++  +   L  + 
Sbjct: 242 DFMRTDVIVICLLIYSVLGLLIDGLI-RTLERFA 274



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 23/267 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P F  R   P     LA +L+  +     L   +    P  I + +   +    L ++ +
Sbjct: 34  PDFARRLASP-----LAILLLWELAAQTGLIPARVIAAPSAIGETLWAMIASGELGRHLA 88

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R +S + I +    V A ++  SRR  +VL   + +++++P L  +   +++F   
Sbjct: 89  VSLQRAVSGLAIGVGIGTVAALISGLSRRGELVLDSPMQMLRTVPSLALVPLFILWFGIG 148

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E   I  I     + +  +++  + NI   L E + +  L+  +  W++ +P
Sbjct: 149 --------EFTKIALIVMGTTFPVYLNLFAGIRNIDPKLVEAANTLGLNRRELIWHVILP 200

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P     +  S+   W  +V  E I          GIG   + A        I+  +L
Sbjct: 201 GALPSFFVGLRYSLGISWLALVFVEQI------NATAGIGFLASDARDFMRTDVIVICLL 254

Query: 247 TMLGVIFLYDQL---LFRPMIVWSNKF 270
               +  L D L   L R  + W   F
Sbjct: 255 IYSVLGLLIDGLIRTLERFALAWRPSF 281


>gi|149203451|ref|ZP_01880421.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149143284|gb|EDM31323.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 651

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 82/526 (15%), Positives = 169/526 (32%), Gaps = 41/526 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+A  T   ++ A  +S+L   +      + R +  V+ P+L+I QS+P   ++   VV
Sbjct: 140 WQWAMETLSVIVVAAPVSVLLGLMMGVATWRWRWVEAVMNPVLNIAQSLPHFAYMIPIVV 199

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +         +G +  AI  I  S V  M       L  +P ++ E  +    + WQ   
Sbjct: 200 FIG-------VGPKAGAIVTIIFS-VPPMIRMTLLGLRKVPPEVIESGKMCGSTSWQLMT 251

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +   +      VV +  I +      L          ++   +   
Sbjct: 252 RVRIPTARTEILVGVNQVIMQCLAMVVLASFIGMPGLGQKL-------LQLLQALKIGRS 304

Query: 242 LYAMLTMLGVIFLYDQLL----------FRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           +   +T++ +    D+              P + W+ + R+     +     + L     
Sbjct: 305 IEIGITIVLLAVALDRCSKAWAERQPVHHEPGLSWTARHRVMSVWAVLMVAGFALSAVV- 363

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTL----GVIRFHFPENFLQLCSNQRVSYMLDIF 347
             F       S +   PL   +  +  TL      +R+      L    +  +       
Sbjct: 364 PFFAEVGRGQSLSLADPLDAMMSWVIVTLDPVTQWLRWFLITWVLIPVRDALLWLPYTAV 423

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              V         W+S    V    Y  +        IT++ V+V + +A+    P+GIW
Sbjct: 424 LALVAAAGLAVGGWRSALICVGFIGYIAITGWWDRAMITVYTVLVAVAVATSFGFPLGIW 483

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                  + ++      L  FP+ ++   V+       +     + L        Y    
Sbjct: 484 AARHEARAKRVLLLCDSLQTFPSFIYLIPVIMLFGVNDVAVVGAVVLFAAVPLIRY---- 539

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G    P    E A     T  +   ++ LP   P  + G   +   +    I++   
Sbjct: 540 TIEGLRGVPEAVIEAADMSGATRGQSLWHVRLPLALPTIMVGINQSLMFSLFMVIIAAFI 599

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      LG  +  +       + ++    +    LA +  +
Sbjct: 600 GTQD-------LGQEMQRALSSTDVGKGLVLGFAVAFIGLAADHLI 638



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 60/194 (30%), Gaps = 8/194 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN----HFTYQDVLYVIWLGCITMFRVVVLI 394
           R   +  + W  V         W     +       F +  ++        T+  +VV  
Sbjct: 95  RWPRIGPLPWIVVALSAGCLGYWLGGLRLALLAGGTFVWIALMGQWQWAMETLSVIVVAA 154

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            ++ ++ + +G+       + + + P   +  + P   +    +  V +  + P     +
Sbjct: 155 PVSVLLGLMMGVATWRWRWVEAVMNPVLNIAQSLPHFAYM---IPIVVFIGVGPKAGAIV 211

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +IF +   ++   + G    P +  E       T W+    + +P      + G     
Sbjct: 212 TIIF-SVPPMIRMTLLGLRKVPPEVIESGKMCGSTSWQLMTRVRIPTARTEILVGVNQVI 270

Query: 515 GGAWNASIVSEVAS 528
                  +++    
Sbjct: 271 MQCLAMVVLASFIG 284


>gi|52079353|ref|YP_078144.1| aliphatic sulfonate ABC transporter permease [Bacillus
           licheniformis ATCC 14580]
 gi|52784716|ref|YP_090545.1| SsuC [Bacillus licheniformis ATCC 14580]
 gi|319646862|ref|ZP_08001091.1| SsuC protein [Bacillus sp. BT1B_CT2]
 gi|52002564|gb|AAU22506.1| aliphatic sulfonate ABC transporter (permease) [Bacillus
           licheniformis ATCC 14580]
 gi|52347218|gb|AAU39852.1| SsuC [Bacillus licheniformis ATCC 14580]
 gi|317391450|gb|EFV72248.1| SsuC protein [Bacillus sp. BT1B_CT2]
          Length = 278

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 10/264 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           S+      +T   +R               V  +L       +  ++  +    +  ++ 
Sbjct: 6   SSTPSIQPKTGAKLRPAAFRLAWGKGFVLPVMLILLWQLVGSLELISKTVLPAPLDILLT 65

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    +     I++ R  +   + + + + +G+ IGF       + P  Q+L   P
Sbjct: 66  FRDLIVSGELFTHLGISIQRAALGFFLGAGLGLLLGLVIGFSKIAEDYLDPSLQMLRTVP 125

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                PL +    +  L+      LL+  G  + +  N  +G     +   +VA      
Sbjct: 126 HLAVTPLFILWFGFDELSK----VLLIALGAFFPVYINTFSGIRGVDSKLFDVARVLEFH 181

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    +ILP   P  + G   + G +W   +V+E+         + G+G  I ++ + 
Sbjct: 182 WLKQVTKLILPASLPNILLGIRLSLGVSWLGLVVAELMG------SSAGVGYMIMDARQF 235

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
               +V +G+LI        + F+
Sbjct: 236 SQTDKVFVGILIFAAVGKLTDSFV 259



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 88/238 (36%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +L+  ++ ++ L        P DI+      +    L  +   +  R      +   
Sbjct: 36  VMLILLWQLVGSLELISKTVLPAPLDILLTFRDLIVSGELFTHLGISIQRAALGFFLGAG 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   S+     L P L +++++P L      +++F      KV+   L A F 
Sbjct: 96  LGLLLGLVIGFSKIAEDYLDPSLQMLRTVPHLAVTPLFILWFGFDELSKVLLIALGAFFP 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L +V+R       ++   L +P S+P ++  + +S+ 
Sbjct: 156 VY--------INTFSGIRGVDSKLFDVARVLEFHWLKQVTKLILPASLPNILLGIRLSLG 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +V +E++          G+G  I  A +      +   +L    V  L D  +
Sbjct: 208 VSWLGLVVAELMGSSA------GVGYMIMDARQFSQTDKVFVGILIFAAVGKLTDSFV 259


>gi|319944460|ref|ZP_08018734.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Lautropia mirabilis ATCC
           51599]
 gi|319742421|gb|EFV94834.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Lautropia mirabilis ATCC
           51599]
          Length = 284

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 83/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                +T   ML A  +S++       L  +   +  VL P+LD+MQ++P   +L   V+
Sbjct: 90  WDAGMQTLALMLMATFLSVVIGIPVGILMGRVDWVRAVLNPVLDVMQTMPSFVYLIPVVM 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F           +  A+ A     V  +       +    +++ E SR++  + WQ+ +
Sbjct: 150 LFGLG--------KTPALIATIIYAVAPLIRLTDLGIRLADKEVLEASRAYGANTWQQLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  +       VV + MI          G+G  +   I   ++   
Sbjct: 202 GVQIPLALPNIMAGINQTTMMALAMVVIASMI-------GATGLGQEVLQGINRLEVGRG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A ++++ +  L+D++
Sbjct: 255 LMAGVSIVVLAILFDRI 271



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 83/254 (32%), Gaps = 11/254 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +LG +  HF           R +    +    +V    +         +        +L 
Sbjct: 29  SLGALSDHFERWLGWFEKLLRTAPWWSVVLTVIVVAWLLTRRIGLSLLMGGLLCIIGLLG 88

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   G  T+  +++   ++ +I IPVGI +G    + + + P   ++   P+ V+   VV
Sbjct: 89  LWDAGMQTLALMLMATFLSVVIGIPVGILMGRVDWVRAVLNPVLDVMQTMPSFVYLIPVV 148

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +   +  +      ++     G      +  E + ++    W+    + 
Sbjct: 149 MLFGLGKTPALIATIIYAVA----PLIRLTDLGIRLADKEVLEASRAYGANTWQQLFGVQ 204

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G       A    +++ +          TGLG  + +   +      ++ 
Sbjct: 205 IPLALPNIMAGINQTTMMALAMVVIASMIG-------ATGLGQEVLQGINRLEVGRGLMA 257

Query: 559 VLIMCCFVLALNRF 572
            + +    +  +R 
Sbjct: 258 GVSIVVLAILFDRI 271


>gi|288919297|ref|ZP_06413632.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288349291|gb|EFC83533.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 339

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 20/265 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +RR+      L+A+ L  G+    L G +E   P D+V           L    + +
Sbjct: 89  PPWTRRLAGPALLLVAWSLATGLN---LVGDRELAPPGDVVGAARELWSSGELADNLATS 145

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+   ++I +      A +A   R    V+   ++ +++IP++  L   +V+      
Sbjct: 146 LFRVAWGLLIGVALGLALAVVAGFFRFGEDVVDSAMNFLRAIPVIALLPLIIVWIGIG-- 203

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E A IF I     + +  + + ++  +   L E  R+F LS       + +P +
Sbjct: 204 ------EEAKIFLITVGVTFPIYMNTFAAIRGVDIKLVEAGRAFGLSRTGLIRRVIIPGA 257

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PG +  +  SM   W  VV +E +          G+G  +  A        ++  ++  
Sbjct: 258 LPGFLVGLRWSMGVAWLLVVFAEQV------NTDSGLGYLLNRAQGWNRTDIMVLCLVIY 311

Query: 249 LGVIFLYD---QLLFRPMIVWSNKF 270
             +  L D   ++L R ++ W   F
Sbjct: 312 GILGLLCDGIVRVLERSLLSWRRGF 336



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 84/266 (31%), Gaps = 13/266 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYI 367
             V  L    G          +   + +     L +  + +  G+ +    +       +
Sbjct: 67  RLVSALEDPTGKRHRARRARRIPPWTRRLAGPALLLVAWSLATGLNLVGDRELAPPGDVV 126

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +      ++FRV   ++I   + + + +  GF       +      L A
Sbjct: 127 GAARELWSSGELADNLATSLFRVAWGLLIGVALGLALAVVAGFFRFGEDVVDSAMNFLRA 186

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++  +             L+  G  + I  N  A          E   +F 
Sbjct: 187 IPVIALLPLIIVWIGIG----EEAKIFLITVGVTFPIYMNTFAAIRGVDIKLVEAGRAFG 242

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++     R +I+PG  P ++ G   + G AW   + +E  +        +GLG  +  + 
Sbjct: 243 LSRTGLIRRVIIPGALPGFLVGLRWSMGVAWLLVVFAEQVN------TDSGLGYLLNRAQ 296

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
                  +VL ++I     L  +  +
Sbjct: 297 GWNRTDIMVLCLVIYGILGLLCDGIV 322


>gi|156934572|ref|YP_001438488.1| alkanesulfonate transporter permease subunit [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532826|gb|ABU77652.1| hypothetical protein ESA_02406 [Cronobacter sakazakii ATCC BAA-894]
          Length = 263

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  + +       +    P  +V+          L Q+ + ++ R L    I  L
Sbjct: 19  VGIIAVWQLASQTGWLSTRILPSPESVVETFWRLTASGELWQHLAISSWRALVGFSIGGL 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  ++  SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLALGLISGLSRWGERLLDSSIQMLRNVPHLALIPLVILWFGID--------ESAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI   L E++RS+ LSG+  F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 191 LMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADLSARA 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 245 LERVWLRWHPAYQLKEANA 263



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           QR +  +       V  +A    W S   + +  +  +  + +           I+ +R 
Sbjct: 10  QRAAPWVLPVGIIAVWQLASQTGWLSTRILPSPESVVETFWRLTASGELWQHLAISSWRA 69

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V   I  +I + +G+  G        +    Q+L   P     PLV+            
Sbjct: 70  LVGFSIGGLIGLALGLISGLSRWGERLLDSSIQMLRNVPHLALIPLVILWFGI----DES 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G     +   E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGV 185

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 186 RFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239


>gi|28867693|ref|NP_790312.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213967765|ref|ZP_03395912.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301382401|ref|ZP_07230819.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061206|ref|ZP_07252747.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302132422|ref|ZP_07258412.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28850928|gb|AAO54007.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213927541|gb|EEB61089.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|330874755|gb|EGH08904.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330965478|gb|EGH65738.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331015007|gb|EGH95063.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 281

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  FVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA       ++ P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L+       T+ +V+   ++  +I +P+GI    +P   + I+P
Sbjct: 69  WGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 LLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|148547436|ref|YP_001267538.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148511494|gb|ABQ78354.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 282

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +L +  + +L       L A       +L+P+LD+MQ++P   +L   
Sbjct: 90  GLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAFVYLIPV 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ A+FA     +  +       L  I   L + +     S WQ+
Sbjct: 150 LMLFGLG--------KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQR 201

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  S+      VV + MI          G+G  +   I+  ++ 
Sbjct: 202 LRRIALPLALPSIMAGLNQSVMMALSMVVVASMI-------GARGLGEDVLAGIQTLNVG 254

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  + D++
Sbjct: 255 QGMEAGLAIVALAMVIDRI 273



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 11/208 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V       +L +      T+  V+V   +  ++ +P+GI +  RP     + P   +
Sbjct: 77  AVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDV 136

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA V+   V+           +      +      ++     G S       + A 
Sbjct: 137 MQTLPAFVYLIPVLMLFGLG----KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAH 192

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               + W+  R I LP   P  + G   +   A +  +V+ +           GLG  + 
Sbjct: 193 GLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIG-------ARGLGEDVL 245

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +  +  + +   L +    + ++R 
Sbjct: 246 AGIQTLNVGQGMEAGLAIVALAMVIDRI 273


>gi|299770706|ref|YP_003732732.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
 gi|298700794|gb|ADI91359.1| Taurine transport system permease protein tauC [Acinetobacter sp.
           DR1]
          Length = 314

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 292 GLVCDWLL 299



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D LL +
Sbjct: 287 IIGVIGLVCDWLLMK 301


>gi|170734839|ref|YP_001773953.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820877|gb|ACA95458.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 285

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 11/236 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
              P    ++         L +    V  G        +   I++      +  V     
Sbjct: 24  RRDPLRAWRIAGLALPFAALVLLEVVVRRGWLPDHLVPAPSEILDTLARMGITRVARHVG 83

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV       + + + VG  +G    I +  +P  Q L A P+  + P+++  +   
Sbjct: 84  ASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGI- 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V+AG         E+ + + +     +R I+LP   P
Sbjct: 143 ---DEAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             VTG  T    AW   + +E+ +       T GLG  +++  E G  P++V GV+
Sbjct: 200 QIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGR-PDLVFGVI 248



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 20/260 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSLPQYAS 66
           RR     + +    L    + +L   ++   +P  +V      LD      +  + ++  
Sbjct: 24  RRDPLRAWRIAGLALPFAALVLLEVVVRRGWLPDHLVPAPSEILDTLARMGITRVARHVG 83

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +TLR+ +          V       SRR+  +  P    +++IP L ++   +++    
Sbjct: 84  ASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGID 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E   I  I     + +  ++   + ++ R L E+   +RL     F  + +P
Sbjct: 144 --------EAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLP 195

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +   +L
Sbjct: 196 AALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLVFGVIL 249

Query: 247 TMLGVIFLYDQLLFRPMIVW 266
            +  +  L D  + R    W
Sbjct: 250 LLALLGKLTDGAMRRIESRW 269


>gi|84685623|ref|ZP_01013520.1| ABC transporter, permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666289|gb|EAQ12762.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 269

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 87/257 (33%), Gaps = 20/257 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------- 381
           ++  +            + W+  V  V                    +L V+W       
Sbjct: 5   KSPHKAALRAHAFRGFLMAWWLPVLAVVAWYVLSDSSTSFYFPPLSKILAVLWRDLTDGP 64

Query: 382 ---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 +++  + V + +A +I +  G++IG    +     P    L + P     P+V+
Sbjct: 65  LLGYMFVSLSNMAVGLALAILIGVGTGLYIGDHAKVRQAAMPMLNFLRSVPPAAIVPIVI 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++ F   W IL N I G    P +  + A +F I     +R ++
Sbjct: 125 IALGIGAA----PKIFIIAFTCLWPILLNTIDGVRGMPEELSDTARAFRIPRGLTYRRVL 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           L    P  + G   A   A    ++SE          + GLG YI E+ ++ +  E   G
Sbjct: 181 LMASLPQIMAGIRVAIAVALVLMVISEFFG------ASAGLGFYINENKQRFAMVETWAG 234

Query: 559 VLIMCCFVLALNRFLWH 575
            +++      L+     
Sbjct: 235 TILIGVLGYVLSAVFLQ 251



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 90/244 (36%), Gaps = 18/244 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI----TLDVHSLPQYASRTTLRMLSAMV 77
           +  ++ V+ ++   +     T+     +  +       L    L  Y   +   M   + 
Sbjct: 22  MAWWLPVLAVVAWYVLSDSSTSFYFPPLSKILAVLWRDLTDGPLLGYMFVSLSNMAVGLA 81

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++L             ++    +P+L+ ++S+P    +   ++        K       
Sbjct: 82  LAILIGVGTGLYIGDHAKVRQAAMPMLNFLRSVPPAAIVPIVIIALGIGAAPK------- 134

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF I  + +W +  +    +  +P +L + +R+FR+     +  + +  S+P ++  + 
Sbjct: 135 -IFIIAFTCLWPILLNTIDGVRGMPEELSDTARAFRIPRGLTYRRVLLMASLPQIMAGIR 193

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++     +V SE            G+G YI    +   ++      + +  + ++   
Sbjct: 194 VAIAVALVLMVISEFFGASA------GLGFYINENKQRFAMVETWAGTILIGVLGYVLSA 247

Query: 258 LLFR 261
           +  +
Sbjct: 248 VFLQ 251


>gi|307296891|ref|ZP_07576708.1| binding-protein-dependent transport systems inner membrane
           component [Sphingobium chlorophenolicum L-1]
 gi|306877612|gb|EFN08839.1| binding-protein-dependent transport systems inner membrane
           component [Sphingobium chlorophenolicum L-1]
          Length = 272

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 14/220 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  ++  +   L    LP     +  R+   ++I +    +   +A  SR   + 
Sbjct: 50  RTLAAPSAVIGTLLEMLLSGELPSNLLVSFARVAIGLLIGVSLGLILGLVAGLSRAGELA 109

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P++ I ++IP L      +V+F      K        +  I    V+ +  ++Y  + 
Sbjct: 110 VDPLMQIKRTIPALALTPLFIVWFGIGETPK--------VALIAFGTVFPVYLNLYSGIR 161

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +   L + ++SF LS W++ W++ +P ++P L+  +  ++S     +V +E I      
Sbjct: 162 GVDLRLLDAAKSFGLSRWEQIWHVVLPSALPSLLVGLRYALSVAILVLVVAEQINASA-- 219

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G  I  A        I+  ++    +    D L+
Sbjct: 220 ----GLGYLINNARDFMRTDIIVVCLMVYAILGLGADWLV 255



 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV + ++I   + + +G+  G        + P  Q+    PA    PL +     
Sbjct: 76  LVSFARVAIGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+ FGT + +  N+ +G         + A SF ++ W    +++LP   
Sbjct: 136 GETPK----VALIAFGTVFPVYLNLYSGIRGVDLRLLDAAKSFGLSRWEQIWHVVLPSAL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A   A    +V+E  +       + GLG  I  + +      +V+ +++  
Sbjct: 192 PSLLVGLRYALSVAILVLVVAEQIN------ASAGLGYLINNARDFMRTDIIVVCLMVYA 245

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 246 ILGLGADWLV 255


>gi|298674764|ref|YP_003726514.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298287752|gb|ADI73718.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 278

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              +V+ I+       +   +   I  I    LD   L     +T   ++S+ VI+L+  
Sbjct: 53  WLFIVLFIVAAYFLTGRNWHIA-AIGGIGFFVLDNLQLWSLGMQTIALVISSAVIALIIG 111

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L++K+      + P+LD+MQ++P   +L   V++F     G V G     +FA+ 
Sbjct: 112 IPVGILSSKNDNFKAAIKPLLDLMQTMPPFVYLIPAVIFFGL---GNVPGLIATIVFAMP 168

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +P +L EV+ +F  +  QK   + +P ++  ++  +   +   
Sbjct: 169 PG-----IRLTDLGIRQVPTELVEVADAFGSTPMQKLVKVQLPVALQTIMTGINQVIMLS 223

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI          G+G  + + I+  D+     A L ++ +  + D+L
Sbjct: 224 LSMVVIAAMI-------GARGLGYQVLIGIQRVDIGLGFEAGLGIVIIAIILDRL 271



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + L I  F V      G  W         F   D L +  LG  T+  V+   +IA II
Sbjct: 51  PHWLFIVLFIVAAYFLTGRNWHIAAIGGIGFFVLDNLQLWSLGMQTIALVISSAVIALII 110

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IPVGI      +  + I+P   L+   P  V+    V      ++   +   +      
Sbjct: 111 GIPVGILSSKNDNFKAAIKPLLDLMQTMPPFVYLIPAVIFFGLGNVPGLIATIVF----A 166

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               +     G    P +  EVA +F  T  +    + LP      +TG       + + 
Sbjct: 167 MPPGIRLTDLGIRQVPTELVEVADAFGSTPMQKLVKVQLPVALQTIMTGINQVIMLSLSM 226

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++ +           GLG  +    ++          L +    + L+R 
Sbjct: 227 VVIAAMIG-------ARGLGYQVLIGIQRVDIGLGFEAGLGIVIIAIILDRL 271


>gi|134100948|ref|YP_001106609.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133913571|emb|CAM03684.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 244

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +   +IA  I +P+G+ IG+   +S  + P  +L     A    P+ V  +  
Sbjct: 53  GASLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGL 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++F   W IL N I+G         + A S     +  +  ++LP + 
Sbjct: 113 GETSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVV 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   +    + +E+A          GLG  I  S      P++  G++ + 
Sbjct: 169 PTVFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITIS 222

Query: 564 CFVLALNRFL 573
              L  N+ L
Sbjct: 223 LLGLGFNQAL 232



 Score = 95.0 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVIS 79
            +  F+LV  +   L         P   V      L     L ++   +  R L+  +I+
Sbjct: 7   GIALFLLVWELTPRLGVVDSIFLPPFSEVVRTWWELAAGGQLWEHLGASLARSLAGFLIA 66

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +        +      +  +L P+L++ ++   L  L   V+        KV        
Sbjct: 67  VAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGETSKVS------- 119

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I  +  W +  +    +  +   L + +RS     +  F+ + +P  +P +   + ++
Sbjct: 120 -LIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPTVFTGIRLA 178

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +     +VA+EM           G+G  I  +     +  +   ++T+  +   ++Q L
Sbjct: 179 GANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLLGLGFNQAL 232

Query: 260 ---FRPMIVW 266
               R +  W
Sbjct: 233 VTAERRLSRW 242


>gi|308177618|ref|YP_003917024.1| aliphatic sulfonates ABC transporter inner membrane subunit
           [Arthrobacter arilaitensis Re117]
 gi|307745081|emb|CBT76053.1| putative aliphatic sulfonates ABC transporter, inner membrane
           subunit [Arthrobacter arilaitensis Re117]
          Length = 285

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQY 64
           + P          I  +L  + +  I +      ++    P  +   +P  L   SL   
Sbjct: 19  LRPSRKVDAFVAPILTVLVLLSLWQIASWASPLREDLFPGPVAVAGKLPELLADGSLVSA 78

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R LS  VI++L     A L A    L   + P++  MQ +P + ++   ++ F 
Sbjct: 79  VGTSLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLVSAMQVLPSIAWVPAAIILFG 138

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      L AI +I           +   +  IP   + +S+    S  +   ++ 
Sbjct: 139 LSDATIYTVLLLGAIPSIIN--------GLLSGIDMIPTQYKALSKVLGASKREHILHIE 190

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++PG V  +    +  W  ++A+E+I VG ++    G+GS +       DL  ++  
Sbjct: 191 LPAALPGYVAGLRQGWAFAWRSLMAAELIAVGGSL--ALGVGSLLQRGRDLADLPLVMLV 248

Query: 245 MLTMLGVIFLYDQLLFRPMIV 265
           +LT+L V  L + L F P+  
Sbjct: 249 ILTILLVGVLIELLFFAPIER 269



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 94/266 (35%), Gaps = 16/266 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS----------IGYIVNHFTY 373
           R   P       S +  +++  I    V+  +    +W S          +         
Sbjct: 10  RTAAPGRTRLRPSRKVDAFVAPILTVLVLLSLWQIASWASPLREDLFPGPVAVAGKLPEL 69

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++     ++FR +   +IA +I  P+ + +  +P +   + P    +   P+  +
Sbjct: 70  LADGSLVSAVGTSLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLVSAMQVLPSIAW 129

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P  +             +  +++ G    I+  +++G    P  +K ++     +    
Sbjct: 130 VPAAIILFGLSDAT----IYTVLLLGAIPSIINGLLSGIDMIPTQYKALSKVLGASKREH 185

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +I LP   P YV G       AW + + +E+ + G       G+G+ +    +    P
Sbjct: 186 ILHIELPAALPGYVAGLRQGWAFAWRSLMAAELIAVGGSL--ALGVGSLLQRGRDLADLP 243

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYL 579
            V+L +L +    + +    + P+  
Sbjct: 244 LVMLVILTILLVGVLIELLFFAPIER 269


>gi|229103520|ref|ZP_04234202.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-28]
 gi|228680016|gb|EEL34211.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-28]
          Length = 282

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 87/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S+R    L 
Sbjct: 59  LPTPFDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSKRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    +  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFNKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSFVRLLEVKFLRWRDNFKGET 280



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 391 VVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   +  S+     G +IG            F       + P  Q+L   P     PL V
Sbjct: 78  LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSKRSEQYLDPSVQMLRTVPHLAVAPLFV 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   +      LL+  G  + +  N   G     +   +VA        +    +I
Sbjct: 138 LWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFNKRKLITKLI 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G
Sbjct: 194 LPAALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVG 247

Query: 559 VLIMCCFVLALNRFL 573
           ++I        + F+
Sbjct: 248 IIIFAFVGKFSDSFV 262


>gi|294853483|ref|ZP_06794155.1| glycine betaine/proline transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294819138|gb|EFG36138.1| glycine betaine/proline transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 301

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V G     IF
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G        +G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAGS-------LGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 82/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G        LG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAGS-------LGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|221069194|ref|ZP_03545299.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220714217|gb|EED69585.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 285

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 10/209 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   +       ++     +  R    + +  ++ + + +  G      + I    Q+  
Sbjct: 73  LRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALAAGLSRTGEALIDGLVQIKR 132

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL +  +             L+       I  N  A   +      E+A + 
Sbjct: 133 AVPTLALIPLAIIWLGIGEA----MKVFLIFTAVLIPIYINTHAALRSIDIGHVELAQTL 188

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++   + R + LPG  P +  G   A    W A +V E+ +        TG+G  +  +
Sbjct: 189 GLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELIN------TQTGIGYLMNRA 242

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            + G    +V+G+LI     L  +  +  
Sbjct: 243 RDWGQTDVIVVGILIYALLGLLSDAAVRR 271



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 87/220 (39%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T P   +          SL  +   +  R  + + + ++   + A  A  SR    ++ 
Sbjct: 66  LTAPSQALRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALAAGLSRTGEALID 125

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ I +++P L  +   +++            E   +F IFT+ +  +  + + +L +I
Sbjct: 126 GLVQIKRAVPTLALIPLAIIWLGIG--------EAMKVFLIFTAVLIPIYINTHAALRSI 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++++  LS  +    + +P ++PG    + M++S  W  +V  E+I        
Sbjct: 178 DIGHVELAQTLGLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELI------NT 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG  +  A        I+  +L    +  L D  + R
Sbjct: 232 QTGIGYLMNRARDWGQTDVIVVGILIYALLGLLSDAAVRR 271


>gi|114706924|ref|ZP_01439823.1| putative permease protein [Fulvimarina pelagi HTCC2506]
 gi|114537474|gb|EAU40599.1| putative permease protein [Fulvimarina pelagi HTCC2506]
          Length = 281

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I ++  ++     +        I  + + +  + +   +T   ++   ++S+L    
Sbjct: 47  FIIIAVLTAVVWFASRSKTITAGTMIALVLIGLFGMWEPTMQTLSIIVVCTLLSILIGMP 106

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L ++S +L  ++ PILD+MQ++P   +L   V+         +I         +   
Sbjct: 107 IGILMSRSDKLQAIVNPILDVMQTMPSFVYLIPIVMLLGIGLIPGLI--------VVVIY 158

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + +++ E + +F  S WQK   + +P S+P ++  +  ++     
Sbjct: 159 AMPPIIRLTNLGIRLVDKEVLEAANAFGSSSWQKLVQVQLPLSLPTIMAGINQTIMMALA 218

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            VV + +I V        G+G  +  AI  Q     +   + ++ +  ++D+
Sbjct: 219 MVVVASLIGV-------RGLGQPVLQAITNQYFTQGVLNGMAIVAIAIIFDR 263



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 95/280 (33%), Gaps = 18/280 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
               R I      F      +++   R L      F +  +       ++ +  + WF  
Sbjct: 2   RQLARSIDQQYRAFSRAWGESIENFFRPLLDFLLWFEDVLISTPWFIIIAVLTAVVWFAS 61

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                      ++  I     ++  +        T+  +VV  +++ +I +P+GI +   
Sbjct: 62  RSKTITAGTMIALVLIGLFGMWEPTMQ-------TLSIIVVCTLLSILIGMPIGILMSRS 114

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + + P   ++   P+ V+   +V  +        +   ++++      I+     G
Sbjct: 115 DKLQAIVNPILDVMQTMPSFVYLIPIVMLLGIG----LIPGLIVVVIYAMPPIIRLTNLG 170

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 +  E A++F  + W+    + LP   P  + G       A    +V+ +     
Sbjct: 171 IRLVDKEVLEAANAFGSSSWQKLVQVQLPLSLPTIMAGINQTIMMALAMVVVASLIG--- 227

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 GLG  + ++     F + VL  + +    +  +R
Sbjct: 228 ----VRGLGQPVLQAITNQYFTQGVLNGMAIVAIAIIFDR 263


>gi|16800083|ref|NP_470351.1| hypothetical protein lin1014 [Listeria innocua Clip11262]
 gi|16413473|emb|CAC96245.1| gbuB [Listeria innocua Clip11262]
          Length = 282

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +  F        G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|254425440|ref|ZP_05039158.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196192929|gb|EDX87893.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 298

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 83/224 (37%), Gaps = 13/224 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V  F+      +I     +  RV+     A+++ IPVG+ +G    + S +  F + 
Sbjct: 84  AVVVRGFSMLLDGDLIVDIFASSARVIAGFTFAALVGIPVGLAMGTFYSMDSLLGGFIRT 143

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P   F PL++        +      +++  G  +Y    +       PN+   VA 
Sbjct: 144 ARYLPIAAFVPLIIIWAGIDEASK----IIIIFLGIVFYNATMIADAVKFIPNETLNVAY 199

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   T W     +ILP   P  +        GAWN  ++SE+ +         GLG  I 
Sbjct: 200 TLGATRWDVVHRVILPATLPSILDTLRVNVAGAWNFLVLSELIA------AENGLGFTIV 253

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCL 585
            S         +  +LI+C   LA +   + L+     +    +
Sbjct: 254 RSQRYLQTDRAMFCILIICLIGLATDFAFKLLFRLWLPWADSKM 297



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 101/267 (37%), Gaps = 25/267 (9%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHG--------IQETTVPRDIVDIVPITLDVHSLPQY 64
           R+ FP     L  ++ + +  ++  G         +    P  +V      L    L   
Sbjct: 42  RQGFPGWLQALLVIVSLTVPVLIWAGLSYGEFVNAKFLPTPTAVVVRGFSMLLDGDLIVD 101

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              ++ R+++    + L              +  +L   +   + +PI  F+   +++  
Sbjct: 102 IFASSARVIAGFTFAALVGIPVGLAMGTFYSMDSLLGGFIRTARYLPIAAFVPLIIIWAG 161

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + I  IF   V+     +  ++  IP +   V+ +   + W     + 
Sbjct: 162 ID--------EASKIIIIFLGIVFYNATMIADAVKFIPNETLNVAYTLGATRWDVVHRVI 213

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + ++++G W F+V SE+I   +      G+G  I  + +       ++ 
Sbjct: 214 LPATLPSILDTLRVNVAGAWNFLVLSELIAAEN------GLGFTIVRSQRYLQTDRAMFC 267

Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWSN 268
           +L +  +    D    LLFR  + W++
Sbjct: 268 ILIICLIGLATDFAFKLLFRLWLPWAD 294


>gi|121610711|ref|YP_998518.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555351|gb|ABM59500.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 276

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 15/220 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +   F++     ++    I++ RVV    +++++ +P+G+ IG    + + ++     
Sbjct: 63  AVLGQLFSWMTQDALLADAGISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALIDF 122

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA  F PLV+  V             ++  GT + ++  V       P    E A 
Sbjct: 123 IRYMPAVAFVPLVMLWVGI----DEGAKIAIIFIGTFFQMVLMVAEDVRLVPMAQIEAAQ 178

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   +     +Y+ILP   P  +       G AW   +V+E+ +        +GLG  I 
Sbjct: 179 TMGASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVA------ANSGLGFAIL 232

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           ++       ++  G+L++    L  ++     L+    R 
Sbjct: 233 KAQRFLQTDKIFAGILLIGAIGLLSDQ-----LFRLAHRR 267



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 99/252 (39%), Gaps = 17/252 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASR 67
           + RR+   +      V ++G +     G+ +      P  ++  +   +   +L   A  
Sbjct: 24  LGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPGPAAVLGQLFSWMTQDALLADAGI 83

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR++    +S L            R +  +L  ++D ++ +P + F+   +++     
Sbjct: 84  SVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALIDFIRYMPAVAFVPLVMLWVGID- 142

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A I  IF    + M   + + +  +P    E +++   S  +   Y+ +P 
Sbjct: 143 -------EGAKIAIIFIGTFFQMVLMVAEDVRLVPMAQIEAAQTMGASRGEIVQYVILPA 195

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L+  + ++M   W ++V +E++          G+G  I  A +      I   +L 
Sbjct: 196 AKPALLDTLRITMGWAWTYLVVAELVAANS------GLGFAILKAQRFLQTDKIFAGILL 249

Query: 248 MLGVIFLYDQLL 259
           +  +  L DQL 
Sbjct: 250 IGAIGLLSDQLF 261


>gi|222055581|ref|YP_002537943.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564870|gb|ACM20842.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 297

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 11/195 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             ++    I++ R +  +  A I+ IP+G I  G+ P ++  + P  +LL    A   FP
Sbjct: 97  GELLVHIAISLQRTLQGLFFALIVAIPLGFILAGWFPRLTRFLGPLLRLLGEINAFSLFP 156

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V       L        ++ +   W ILF  IAG       F ++A S        + 
Sbjct: 157 LFVLFFGIGEL----AKFSIIFWSCLWPILFTTIAGVRGVDPLFVKLARSMGSGRLLLFF 212

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LPG  P   TG       A+   I +E+         +TGLG  I  S      P +
Sbjct: 213 KVLLPGALPSIFTGIRLGATVAFLMLIAAEMIG------ASTGLGWLIHNSNVNFIMPRL 266

Query: 556 VLGVLIMCCFVLALN 570
            LG +++    +ALN
Sbjct: 267 YLGAVLVALLGMALN 281



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 85/236 (36%), Gaps = 16/236 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +++  +   L     +    P  I+           L  + + +  R L  +  +L+
Sbjct: 60  IALLVLWELAPRLKWIDSQFVPAPTAIITEGAKLASSGELLVHIAISLQRTLQGLFFALI 119

Query: 82  FTFVYA-TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   LA    RL   L P+L ++  I         V++F           ELA   
Sbjct: 120 VAIPLGFILAGWFPRLTRFLGPLLRLLGEINAFSLFPLFVLFFGIG--------ELAKFS 171

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF S +W + F+    +  +     +++RS        F+ + +P ++P +   + +  
Sbjct: 172 IIFWSCLWPILFTTIAGVRGVDPLFVKLARSMGSGRLLLFFKVLLPGALPSIFTGIRLGA 231

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           +  +  ++A+EMI          G+G  I  +     +  +    + +  +    +
Sbjct: 232 TVAFLMLIAAEMIGAST------GLGWLIHNSNVNFIMPRLYLGAVLVALLGMALN 281


>gi|91780201|ref|YP_555408.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692861|gb|ABE36058.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 283

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +          L ++   +  R++    I  +  F        SR L   ++
Sbjct: 63  LPPPARVYETFMELAHSGDLVRHTLISLQRVVVGFGIGTMGGFAIGAALGLSRTLEAYVL 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K I         I  + +   T S  Q     
Sbjct: 123 PGFNALVQIPVLGWLPFLLLLVGVGEPLKYI--------LIAHAALVPATLSTLQGFRQS 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  LEEV+R +  S WQ+  Y+ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 175 PHSLEEVARGYGYSEWQRIVYVVLPAAVPTLATGVRLAFTKAWLALVVVELVASSE---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  +  + ++LL
Sbjct: 231 --GLGYLIVYGRQLFQLDLVMASVVVVGAIGLVVNRLL 266



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++    I++ RVVV   I ++    +G  +G    + + + P    L   P   
Sbjct: 76  LAHSGDLVRHTLISLQRVVVGFGIGTMGGFAIGAALGLSRTLEAYVLPGFNALVQIPVLG 135

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P ++  V            +L+          + + G    P+  +EVA  +  + W+
Sbjct: 136 WLPFLLLLVGVG----EPLKYILIAHAALVPATLSTLQGFRQSPHSLEEVARGYGYSEWQ 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              Y++LP   P   TG   A   AW A +V E+ +       + GLG  I    +    
Sbjct: 192 RIVYVVLPAAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLFQL 245

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  V+++    L +NR L
Sbjct: 246 DLVMASVVVVGAIGLVVNRLL 266


>gi|313624276|gb|EFR94323.1| glycine betaine transport system permease protein opuAB [Listeria
           innocua FSL J1-023]
          Length = 282

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +           G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVLGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|262198632|ref|YP_003269841.1| binding-protein-dependent transporters inner membrane component
           [Haliangium ochraceum DSM 14365]
 gi|262081979|gb|ACY17948.1| binding-protein-dependent transport systems inner membrane
           component [Haliangium ochraceum DSM 14365]
          Length = 281

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 22/243 (9%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P  +     VLV  +I   + GI        ++ ++ I  D   L      T   ++++
Sbjct: 45  LPPSW---VLVLVFALIAWRMSGIG--MGIFTLLGMLLI--DSMGLWAPTMDTLALVIAS 97

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +VI+LL +      A+KS     V+ P+LD MQ++P   +L   V++F     G+V G  
Sbjct: 98  VVIALLISVPIGIWASKSDTAAHVVRPVLDFMQTLPAFVYLIPAVLFFQL---GEVPGVI 154

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              IFA+  +            +  +P+D++E + SF  +  Q  +   +P +MP ++  
Sbjct: 155 ATLIFAMPPA-----VRLTNLGIRQVPKDIKEAAVSFGSTPSQMLFKAELPVAMPTILAG 209

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  ++      VV + MI  G       G+G+ +   I +  +     + + ++ +    
Sbjct: 210 VNQTIMLALSMVVITGMIGAG-------GLGNQVLKGITQLQIGLGFESGIAIVILAIFL 262

Query: 256 DQL 258
           D++
Sbjct: 263 DRI 265



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-----TMFRVVVLIIIASIIWIPVG 405
           V+  V   IAW+  G  +  FT   +L +  +G       T+  V+  ++IA +I +P+G
Sbjct: 50  VLVLVFALIAWRMSGIGMGIFTLLGMLLIDSMGLWAPTMDTLALVIASVVIALLISVPIG 109

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW       +  ++P    +   PA V+    V       +   +   +  +        
Sbjct: 110 IWASKSDTAAHVVRPVLDFMQTLPAFVYLIPAVLFFQLGEVPGVIATLIFAMPPAVRL-- 167

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P D KE A SF  T  +      LP   P  + G       A +  +++ 
Sbjct: 168 --TNLGIRQVPKDIKEAAVSFGSTPSQMLFKAELPVAMPTILAGVNQTIMLALSMVVITG 225

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  + +   +          + +    + L+R 
Sbjct: 226 MIGAG-------GLGNQVLKGITQLQIGLGFESGIAIVILAIFLDRI 265


>gi|29828100|ref|NP_822734.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29605202|dbj|BAC69269.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 268

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 88/268 (32%), Gaps = 21/268 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R   P    +      +  +  +     V    +  +   I  +         L   
Sbjct: 11  STRRTRVPRWLRRTSGPVLLLLLWQLLSSTGVLTSDVLASPGRIAQVARDLVVDGSLPNA 70

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +++ RV V ++  + I   + +  G        +    Q+L   P     PL +  
Sbjct: 71  --MGVSLQRVAVGLLFGAAIGTGLALVSGLFRAGEDLVDASVQMLRTVPFVGLIPLFIIW 128

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         ++  G  + +  NV AG     +   E   S  ++ W   R+++LP
Sbjct: 129 FGIGEA----PKIAIITLGVSFPLYLNVYAGIRGVDSQLIEAGESLGLSRWGLVRHVVLP 184

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  +TG   + G AW A + +E  +         G+G  + ++ +      +V+ ++
Sbjct: 185 GALPGAMTGLRYSLGIAWLALVFAEQIN------ADAGIGFLMVQARDFLRTDVIVVCLI 238

Query: 561 IMCCFVLA-------LNRFL--WHPLYL 579
           +     L        L R L  W P + 
Sbjct: 239 VYAFLGLLADFVVRSLERLLLQWRPTFT 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I  +    +   SLP     +  R+   ++         A ++   R    ++ 
Sbjct: 48  LASPGRIAQVARDLVVDGSLPNAMGVSLQRVAVGLLFGAAIGTGLALVSGLFRAGEDLVD 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++F           E   I  I     + +  ++Y  +  +
Sbjct: 108 ASVQMLRTVPFVGLIPLFIIWFGIG--------EAPKIAIITLGVSFPLYLNVYAGIRGV 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  LS W    ++ +P ++PG +  +  S+   W  +V +E I        
Sbjct: 160 DSQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSLGIAWLALVFAEQI------NA 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             GIG  +  A        I+  ++    +  L D +   L R ++ W   F
Sbjct: 214 DAGIGFLMVQARDFLRTDVIVVCLIVYAFLGLLADFVVRSLERLLLQWRPTF 265


>gi|33597694|ref|NP_885337.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella parapertussis 12822]
 gi|33602540|ref|NP_890100.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella bronchiseptica RB50]
 gi|33574122|emb|CAE38449.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33576979|emb|CAE34059.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 290

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 9/201 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   +      +++R +    ++ +I IP+G  +G  P +     P   ++   PA  +
Sbjct: 78  PEQGMLFKHIGASLYRAISAFALSVLIGIPLGFCLGLMPSVHKWTSPILSVMLPLPAVAW 137

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++             +  +   G  + +L++ I G  A       V  S        
Sbjct: 138 TPILLVAFGQGDRT----IITVCFLGAFFPVLYSTIQGVKAVSKQSIWVVRSMGGKRRHV 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  ++G       +W   + +E+ +       +TGLG  I  +       
Sbjct: 194 LLNVLLPSCLPALISGLKLGMAHSWRTLVAAEMLA-----AISTGLGYMIFAARSYMDVS 248

Query: 554 EVVLGVLIMCCFVLALNRFLW 574
            + +G+ ++    +A+   ++
Sbjct: 249 TMFVGIALLALIGMAIEYGIF 269



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 13/236 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             +  G I   +         R    +     +   L ++   +  R +SA  +S+L   
Sbjct: 47  LAVRAGWIASNIFPSPSMIFARASEQLFSTGPEQGMLFKHIGASLYRAISAFALSVLIGI 106

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                      +     PIL +M  +P + +    +V F           +   I   F 
Sbjct: 107 PLGFCLGLMPSVHKWTSPILSVMLPLPAVAWTPILLVAFGQG--------DRTIITVCFL 158

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + + +S  Q +  + +    V RS           + +P  +P L+  + + M+  W
Sbjct: 159 GAFFPVLYSTIQGVKAVSKQSIWVVRSMGGKRRHVLLNVLLPSCLPALISGLKLGMAHSW 218

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             +VA+EM+    T     G+G  I  A    D+  +   +  +  +    +  +F
Sbjct: 219 RTLVAAEMLAAIST-----GLGYMIFAARSYMDVSTMFVGIALLALIGMAIEYGIF 269


>gi|313619571|gb|EFR91235.1| glycine betaine transport system permease protein opuAB [Listeria
           innocua FSL S4-378]
          Length = 282

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 90  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVA 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 150 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 202 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 255 FVAGIAIVIVAIILDRL 271



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +  F        G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 53  FIILLVFGTFWVNRKGKKWGLIIFEVIGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 112

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 113 PLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 168

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 169 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 228

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 229 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 271


>gi|134292188|ref|YP_001115924.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134135345|gb|ABO56459.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 298

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +   L P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAATLRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IG+    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGVGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+GIW      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGIWAAKSKWVAATLRPVLDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|307352362|ref|YP_003893413.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
 gi|307155595|gb|ADN34975.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
          Length = 284

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 15/234 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F++++ +     +   +       +    + +    L   +  T   ++++  I+LL   
Sbjct: 57  FIIILILAAAGWYVSNKDWKMPVFIAAGLLLIQNLRLWPESMETLALVITSTFIALLIAI 116

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A+++     VL P LD MQ++P   +L   V++F     G V G     IFA+  
Sbjct: 117 PTGITASRNDIFDRVLRPFLDFMQTMPSFVYLIPAVIFFAL---GDVPGVIATVIFAMPP 173

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +            +  IP++L EV+ SF  +  QK   + +P +MP ++  +   +    
Sbjct: 174 A-----IRLTNLGIRQIPKELNEVADSFGATPNQKLIKVQLPVAMPTIMAGVNQCIMLSL 228

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              V + MI  G       G+G  + + I+  D+     A L ++ +  + D+L
Sbjct: 229 SMTVIASMIGAG-------GLGYNVLVGIQRVDIGMGFEAGLAIVIIAIILDRL 275



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 11/213 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   + I              W+   +I         L +      T+  V+    IA +
Sbjct: 54  IPSFIIILILAAAGWYVSNKDWKMPVFIAAGLLLIQNLRLWPESMETLALVITSTFIALL 113

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP GI           ++PF   +   P+ V+    V   +   +   +   +     
Sbjct: 114 IAIPTGITASRNDIFDRVLRPFLDFMQTMPSFVYLIPAVIFFALGDVPGVIATVIF---- 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P +  EVA SF  T  +    + LP   P  + G       + +
Sbjct: 170 AMPPAIRLTNLGIRQIPKELNEVADSFGATPNQKLIKVQLPVAMPTIMAGVNQCIMLSLS 229

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            ++++ +   G       GLG  +    ++   
Sbjct: 230 MTVIASMIGAG-------GLGYNVLVGIQRVDI 255


>gi|227824437|ref|ZP_03989269.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21]
 gi|226904936|gb|EEH90854.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21]
          Length = 286

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T   +L+A+  SLL       L A  +R   ++ P LD MQ++P   ++   V+
Sbjct: 94  WQMMCETLSIVLAAVFFSLLIGLPIGVLLASIKRADPLIRPFLDAMQTMPTFVYMIPAVM 153

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                 PGKV       ++A+       +       +  +  ++ E SRSF  S +Q   
Sbjct: 154 LLG---PGKVPAVLATVVYAVV-----PVIRLTSHGIKQVDPEVVEASRSFGASRFQTLV 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  +M      VV S MI          G+G  + +AI   +    
Sbjct: 206 KVQIPQALPTIMTGINQTMMMAVAMVVTSSMIGAN-------GLGMEVLIAINRMESGRG 258

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A L+++ +  L D+L
Sbjct: 259 LSAGLSIVIIAILLDRL 275



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 94/285 (32%), Gaps = 17/285 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           N+L        N   P+   V+ +    G     F +  + +      S +  I W+ ++
Sbjct: 3   NYLTTFPNLRINVAEPVDAFVRYINIHYGEFFVSF-KRLIGIFVGALNSGLDAIPWWILI 61

Query: 353 CGVAIGIA-----WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
             VA G       ++   +      +  +L    + C T+  V+  +  + +I +P+G+ 
Sbjct: 62  LAVAYGGGRLMNSYRKGAFFGGLLFFIGLLGYWQMMCETLSIVLAAVFFSLLIGLPIGVL 121

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +         I+PF   +   P  V+    V  +        +   L  +      ++  
Sbjct: 122 LASIKRADPLIRPFLDAMQTMPTFVYMIPAVMLLGPG----KVPAVLATVVYAVVPVIRL 177

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G      +  E + SF  + ++    + +P   P  +TG       A    + S + 
Sbjct: 178 TSHGIKQVDPEVVEASRSFGASRFQTLVKVQIPQALPTIMTGINQTMMMAVAMVVTSSMI 237

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                     GLG  +  +  +      +   L +    + L+R 
Sbjct: 238 G-------ANGLGMEVLIAINRMESGRGLSAGLSIVIIAILLDRL 275


>gi|239813174|ref|YP_002942084.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799751|gb|ACS16818.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 292

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 105/296 (35%), Gaps = 15/296 (5%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           +  L  +   +    S  +       R   +          ++           + W   
Sbjct: 6   SKALPQVAPRAAAPASAATPQAAVPARRRSLAPLEPVSGRARVLLGLGFFVAFVLVWSVA 65

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIG 409
             G  +   + +    +    +       ++G   +T++RV    ++A+++ +P+GI +G
Sbjct: 66  TLGGFVPPTFLASPVTMLKEGWMLFAEFGFIGDVGMTVWRVFGGFLLAAVLAVPLGIAMG 125

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + +  +PF       PA+ F PL++       +       L++  G+ + I+  V 
Sbjct: 126 TWKAVEAFFEPFVSFCRYLPASAFIPLLILWAGLGEMQK----LLVIFIGSFFQIVLMVA 181

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                   D  E A +           +++PG  P          G AW   IV+E+   
Sbjct: 182 VTVGGARRDLVEAAYTLGAKSRGIVARVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG- 240

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
                 ++G+G  I +S    +  +++ G++++    L  +   + L   ++ +  
Sbjct: 241 -----SSSGIGHMITDSQALLNTGQIIFGIIVIGVIGLVSDFAFKALNRRMFAWAA 291



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 85/250 (34%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +AFVLV  +  +           P  ++    +             T  R+    +++ 
Sbjct: 55  FVAFVLVWSVATLGGFVPPTFLASPVTMLKEGWMLFAEFGFIGDVGMTVWRVFGGFLLAA 114

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            + +     P +   + +P   F+   +++            E+  + 
Sbjct: 115 VLAVPLGIAMGTWKAVEAFFEPFVSFCRYLPASAFIPLLILWAGLG--------EMQKLL 166

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    + +   +  ++    RDL E + +           + +P + PG+   + + +
Sbjct: 167 VIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGAKSRGIVARVLIPGAAPGIAETLRLVL 226

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D    
Sbjct: 227 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGVIGLVSDFAFK 280

Query: 258 LLFRPMIVWS 267
            L R M  W+
Sbjct: 281 ALNRRMFAWA 290


>gi|221210668|ref|ZP_03583648.1| inner membrane protein [Burkholderia multivorans CGD1]
 gi|221169624|gb|EEE02091.1| inner membrane protein [Burkholderia multivorans CGD1]
          Length = 321

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV+ ++  +            +  ++   +    L     +T   ML A V+S+      
Sbjct: 55  LVLLVVGAIAWNATRRLGLGVLFMLLLYAIGCFGLWDKLMQTLALMLVATVLSVAIGVPL 114

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LA++S  L  +L+P+LD+MQ++P   +L   ++ F           ++ AI A     
Sbjct: 115 GILASRSAALRRMLLPVLDVMQTLPSFVYLIPVLMLFGLG--------KVPAILATIIYA 166

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +  D+ E +R+F  + WQ    + +P + P ++  +  +       
Sbjct: 167 LPPLIRLTDLGIRQVDPDVTEAARAFGTTRWQLLLNVQLPLARPNIMAGINQTTMMALSM 226

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  +   I+  D+     A + ++ +  + D++
Sbjct: 227 VVIASMIGS-------RGLGEDVLAGIQTLDVGKGTQAGIAIVILAIVIDRI 271



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 10/235 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
              ++      F +   ++       L        E  L+      V  ++    +    
Sbjct: 10  IADWVNSVIETFVAQYGDSFHHFSAMLLRYLLVPLEGALRATPPWLVLLVVGAIAWNATR 69

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            + +G+ +  + Y +  F   D L        T+  ++V  +++  I +P+GI       
Sbjct: 70  RLGLGVLFMLLLYAIGCFGLWDKLMQ------TLALMLVATVLSVAIGVPLGILASRSAA 123

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P+ V+   V+           +   L  I      ++     G  
Sbjct: 124 LRRMLLPVLDVMQTLPSFVYLIPVLMLFGLG----KVPAILATIIYALPPLIRLTDLGIR 179

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               D  E A +F  T W+    + LP   P  + G       A +  +++ +  
Sbjct: 180 QVDPDVTEAARAFGTTRWQLLLNVQLPLARPNIMAGINQTTMMALSMVVIASMIG 234


>gi|229543164|ref|ZP_04432224.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229327584|gb|EEN93259.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 260

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 10/206 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             ++          +     I++ R V   +I   I   +G+  G        +    Q+
Sbjct: 44  DVLIAAVELAKSGELGHHVWISLLRAVTGFLIGGSIGFILGLVNGLFRTSELLLDTSVQM 103

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+                L+  G  + +  N   G  +  N   E+  
Sbjct: 104 LRTIPHLALIPLVILWFGIG----EEAKIFLVALGVLFPVYLNTFHGIKSVDNGLIEMGK 159

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + + GWR + ++I PG     + G   + G  W   IV+E  S       T+G+G    
Sbjct: 160 IYGLKGWRMFAHVIFPGSLSSILVGIRFSLGVMWITLIVAETIS------STSGIGYMAM 213

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + E      ++L +L+   F    +
Sbjct: 214 TAREFMQMDVILLSILLYALFGKLSD 239



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 106/270 (39%), Gaps = 21/270 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINIL--LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
              F  +++ P  + + A +++I  I     +   +    P D++           L  +
Sbjct: 4   FTGFFIQKLIP--WGIPAVIIIIWQIFAKEGIVSPKILPAPSDVLIAAVELAKSGELGHH 61

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + LR ++  +I     F+   +    R   ++L   + ++++IP L  +   +++F 
Sbjct: 62  VWISLLRAVTGFLIGGSIGFILGLVNGLFRTSELLLDTSVQMLRTIPHLALIPLVILWFG 121

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A IF +    ++ +  + +  + ++   L E+ + + L GW+ F ++ 
Sbjct: 122 IG--------EEAKIFLVALGVLFPVYLNTFHGIKSVDNGLIEMGKIYGLKGWRMFAHVI 173

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P S+  ++  +  S+   W  ++ +E I          GIG     A +   +  IL +
Sbjct: 174 FPGSLSSILVGIRFSLGVMWITLIVAETIS------STSGIGYMAMTAREFMQMDVILLS 227

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           +L       L D   +   +  + W   ++
Sbjct: 228 ILLYALFGKLSDAIARFFEKRCLKWHTSYQ 257


>gi|15966454|ref|NP_386807.1| histidine transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307300509|ref|ZP_07580289.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307318374|ref|ZP_07597809.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15075725|emb|CAC47280.1| Histidine ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306896056|gb|EFN26807.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306904675|gb|EFN35259.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 285

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 102/238 (42%), Gaps = 16/238 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  +++++  + +     +  ++   +   + +T+ V  L     +T   ML A ++S+
Sbjct: 49  GLPWWLVILAFMALAWRSSRRWSLTLAVG-ALLVTVGVLGLWDLTMQTLALMLMATIVSV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L AKSR +  + +P+LD+MQ++P   +L   ++ F           ++ AI 
Sbjct: 108 VIGVPMGILVAKSRVVRNITLPVLDVMQTMPSFVYLIPALMLFGLG--------KVPAIL 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     V  +       +  +  ++ E + +F  S  Q  + + +P + P ++  +  ++
Sbjct: 160 ATIIYAVPPLIRLTDLGIRQVDAEVVEAATAFGGSPGQILFGVELPLATPTIMAGLNQTI 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+G  +   I+  D+   L A + ++ +  + D++
Sbjct: 220 MMALSMVVVASMI-------GARGLGEQVLNGIQTLDVGKGLEAGIGIVILAVVLDRI 270



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 91/273 (33%), Gaps = 15/273 (5%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--- 360
           +  +P+++ ++ L    G +        L+             +W  ++  +A+      
Sbjct: 9   SIRAPVNDFIQALVTNYGWVFKAISGVILKAVLFIEWILRGLPWWLVILAFMALAWRSSR 68

Query: 361 -WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W     +        VL +  L   T+  +++  I++ +I +P+GI +     + +   
Sbjct: 69  RWSLTLAVGALLVTVGVLGLWDLTMQTLALMLMATIVSVVIGVPMGILVAKSRVVRNITL 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   P+ V+    +           +   L  I      ++     G      + 
Sbjct: 129 PVLDVMQTMPSFVYLIPALMLFGLG----KVPAILATIIYAVPPLIRLTDLGIRQVDAEV 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A++F  +  +    + LP   P  + G       A +  +V+ +           GL
Sbjct: 185 VEAATAFGGSPGQILFGVELPLATPTIMAGLNQTIMMALSMVVVASMIG-------ARGL 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +    +     + +   + +    + L+R 
Sbjct: 238 GEQVLNGIQTLDVGKGLEAGIGIVILAVVLDRI 270


>gi|290956488|ref|YP_003487670.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260646014|emb|CBG69105.1| putative transport system integral membrane protein [Streptomyces
           scabiei 87.22]
          Length = 300

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 104/261 (39%), Gaps = 13/261 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R++ P +  +   + V  ++ +       +   P  + D V       +L      +  R
Sbjct: 45  RKVLPPVIAVALVLAVWQLLVLAEVAPAYKLPAPSAVWDEVRQAWLQGTLLDSIWTSVSR 104

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   + +L        L A+ R +   + PIL  +QS+P + ++   VV+         
Sbjct: 105 GLLGFLAALAIGTPLGLLVARVRVVRAAIGPILSGLQSLPSVAWVPAAVVW--------- 155

Query: 132 IGAELAAIF-AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +G E + ++  I    V ++   +   +  +P       R+   +G +  W++ +P ++P
Sbjct: 156 LGLEPSVMYTVILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGATGLKGTWHIVMPAALP 215

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G V  +    +  W  ++A+E+I     +    G+G  +        +  +  A+  +L 
Sbjct: 216 GYVAGLKQGWAFSWRSLMAAEIIAKAPDIGS--GLGQMLEAGRTNSSMPQVFLAIFLILI 273

Query: 251 VIFLYDQLLFRPMIVWSNKFR 271
           V    D LLF P+  W  + R
Sbjct: 274 VGIAIDLLLFSPLERWVLRSR 294



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L  ++   P     L        +       V   + +     +         + +V  
Sbjct: 28  ALDSVQTGRPPLRQVLVRKVLPPVIAVALVLAVWQLLVLAEVAPAYKLPAPSAVWDEVRQ 87

Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
               G +      ++ R ++  + A  I  P+G+ +     + + I P    L + P+  
Sbjct: 88  AWLQGTLLDSIWTSVSRGLLGFLAALAIGTPLGLLVARVRVVRAAIGPILSGLQSLPSVA 147

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P  V  +          +  +++ G    I   +++G    P  F     +   TG +
Sbjct: 148 WVPAAVVWLGLEPS----VMYTVILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGATGLK 203

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              +I++P   P YV G       +W + + +E+ +        +GLG  +       S 
Sbjct: 204 GTWHIVMPAALPGYVAGLKQGWAFSWRSLMAAEIIA--KAPDIGSGLGQMLEAGRTNSSM 261

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           P+V L + ++    +A++  L+ PL  +  R
Sbjct: 262 PQVFLAIFLILIVGIAIDLLLFSPLERWVLR 292


>gi|254254558|ref|ZP_04947875.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia dolosa AUO158]
 gi|124899203|gb|EAY71046.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia dolosa AUO158]
          Length = 298

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++  S        +     + R +  +          +     +++ + I  + V 
Sbjct: 6   PLGSWVDQSVHYLLDHDAATFDAIGRAIEGLAALIEHGLQAVPMWLMMAFFIGIGLWRVG 65

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+      +      F  Q V        IT+   +   II+ ++ IP+GIW     
Sbjct: 66  WRFALFTTLSLLLIFATGFWDQTV--------ITLGLTLSSTIISLVLGIPLGIWAAKSK 117

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++ ++P   L+   PA V+            +   L   +  +             G 
Sbjct: 118 WVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGI 173

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                +  E   +F  T W+    +  P   P  + G       A +  I++ +   G  
Sbjct: 174 RHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-- 231

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  S ++          L +    + L+R 
Sbjct: 232 -----GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|315635359|ref|ZP_07890626.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
 gi|315480344|gb|EFU71010.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
          Length = 250

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             + +R+   + +A +I IP+G+       I        Q+L       + P+ V     
Sbjct: 61  FASFYRIFYALFLALVIGIPIGLIYASNEKIKMIFHLPFQILRMISPLSWMPIAVLVYDS 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +       +  L++    W I+FN+  G +     +  VA SF    +   RY I+P I 
Sbjct: 121 WDG----AIIFLIVMAAVWPIIFNLTQGMAKIDIGWIYVAKSFQANLFNQLRYAIIPAIA 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               TG   A G +W   + +E          T+GLG  I ++ +   + ++   +L + 
Sbjct: 177 QDLTTGLRLALGVSWVIIVPAEYLG------VTSGLGYAINDARDTLDYSKLAALILAIG 230

Query: 564 CFVLALNRFL 573
                ++ FL
Sbjct: 231 LIGFTIDSFL 240



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 99/247 (40%), Gaps = 19/247 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRM 72
           ++F +L  +L   ++ ++   + +  V   I  +  I      L +     +   +  R+
Sbjct: 8   SLFGILILMLFWQVLLMIGSAVNDNYVYTQITPVNAIKSLWDLLFEAKFYEHIFASFYRI 67

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ ++L+       + A + ++ M+      I++ I  L ++   V+ + +       
Sbjct: 68  FYALFLALVIGIPIGLIYASNEKIKMIFHLPFQILRMISPLSWMPIAVLVYDSWDG---- 123

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A IF I  + VW + F++ Q +  I      V++SF+ + + +  Y  +P     L
Sbjct: 124 ----AIIFLIVMAAVWPIIFNLTQGMAKIDIGWIYVAKSFQANLFNQLRYAIIPAIAQDL 179

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +++   W  +V +E + V        G+G  I  A    D   +   +L +  + 
Sbjct: 180 TTGLRLALGVSWVIIVPAEYLGV------TSGLGYAINDARDTLDYSKLAALILAIGLIG 233

Query: 253 FLYDQLL 259
           F  D  L
Sbjct: 234 FTIDSFL 240


>gi|330891305|gb|EGH23966.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 281

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG+I  L H IQ        V +  + +      Q    T  ++L A ++ ++    
Sbjct: 52  FVLIGLIAALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA+      ++ P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGIIAAQKPLFYTIIRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + ++P++L +  ++F  S  Q    + +P++MP +   +   +     
Sbjct: 169 -----IRLTYLGIRDVPQELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L+       T+ +V+   ++  +I +P+GI    +P   + I+P
Sbjct: 69  WGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAQKPLFYTIIRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 LLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELL 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|222081388|ref|YP_002540751.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221726067|gb|ACM29156.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 266

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 90/226 (39%), Gaps = 16/226 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           ++       L  + L      + +R ++  +I  +   V+ T  A SR    +L P  + 
Sbjct: 51  EVARTAKRELFDNDLIGELGFSLMRNIAGFLIGCVIGIVFGTFLALSRIADRLLAPTFNG 110

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ I +L ++    V+F           E A I  +  +    +  + Y  + + P DL 
Sbjct: 111 LKQISLLAWIPLISVWFG--------FGEQAKIVFVALASFIPIALNTYDGMRDAPEDLI 162

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           EV R+ + +  Q+   + +P +MP     + + +   W   V +E  +         G+G
Sbjct: 163 EVGRALKFNARQRVLRIYLPSAMPSTATGVHLGLIYAWLATVGAEYFLAVGR-----GVG 217

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
             +    +  D+  ++  +L +  V F  ++L   L   ++ W  K
Sbjct: 218 GLVIAGRERFDMALVMVGVLVLGLVGFSLNRLAHVLESYLLRWRPK 263



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 65/194 (33%), Gaps = 9/194 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     ++ R +   +I  +I I  G ++         + P    L       + PL+ 
Sbjct: 65  LIGELGFSLMRNIAGFLIGCVIGIVFGTFLALSRIADRLLAPTFNGLKQISLLAWIPLIS 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +          + +   +   I  N   G    P D  EV  +      +    I 
Sbjct: 125 VWFGFG----EQAKIVFVALASFIPIALNTYDGMRDAPEDLIEVGRALKFNARQRVLRIY 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG       AW A++ +E            G+G  +    E+     V++G
Sbjct: 181 LPSAMPSTATGVHLGLIYAWLATVGAEYFL-----AVGRGVGGLVIAGRERFDMALVMVG 235

Query: 559 VLIMCCFVLALNRF 572
           VL++     +LNR 
Sbjct: 236 VLVLGLVGFSLNRL 249


>gi|333010800|gb|EGK30226.1| taurine transport system permease protein tauC [Shigella flexneri
           K-272]
 gi|333021298|gb|EGK40551.1| taurine transport system permease protein tauC [Shigella flexneri
           K-227]
          Length = 205

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 13/197 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + PL+V     
Sbjct: 17  AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 76

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  + +AG  +        A S   +  +   ++ILPG  
Sbjct: 77  GETSK----ILLIYLAIFAPVAMSPLAGVKSAQQVRIRAAQSLGASRAKVLWFVILPGAL 132

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W+  + +E+ +       T GLG  +  + E  +   V+ G+ ++ 
Sbjct: 133 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 186

Query: 564 CFVLALN---RFLWHPL 577
                L    R L   L
Sbjct: 187 IIAFLLELGLRALQRRL 203



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 86/201 (42%), Gaps = 14/201 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L   +L Q+ + +  R++ A++ +++           S  +  +L P++++ + +P L 
Sbjct: 6   DLWTATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLA 65

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   V++F      K++   LA    +  S +          + +  +     ++S   
Sbjct: 66  YLPLMVIWFGIGETSKILLIYLAIFAPVAMSPL--------AGVKSAQQVRIRAAQSLGA 117

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +  W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A +
Sbjct: 118 SRAKVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 171

Query: 235 EQDLLAILYAMLTMLGVIFLY 255
                 +L  +  +  + FL 
Sbjct: 172 FLATDVVLAGIAVIAIIAFLL 192


>gi|330809284|ref|YP_004353746.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377392|gb|AEA68742.1| Taurine ABC transporter permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 249

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 83/252 (32%), Gaps = 10/252 (3%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            +          L + W  +       I  Q          +     ++     ++   V
Sbjct: 4   PKPNWGWASLPFLLLIWIALASRFPTYILPQPWDVAREALRWLGDRSLLQHLQASVLEEV 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
                A I+ I +G   G        I P   L  A P   + PL++      +++    
Sbjct: 64  GGFCAAVIVAIALGTGAGLSSRFRDFISPLNSLFMAIPPIAWAPLIMIIFGLGYVS---- 119

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + L++     + +   +  G  +        A +     W+   ++ LP   P+      
Sbjct: 120 IVLVIFIAAMFPMAVTIQEGVQSIRGGEVRAARTLGANAWQLLAHVYLPASLPFVTAALR 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                 W A + +E+         + G+G  ++   + G+  +V+LG++++      +  
Sbjct: 180 IGFSQGWRALVAAEMIG------ASQGIGWMVSTGGQIGNSSQVLLGIVVIGLIAWLMES 233

Query: 572 FLWHPLYLYGTR 583
           F++  +  +  +
Sbjct: 234 FVFRRIERHYQK 245



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 103/256 (40%), Gaps = 16/256 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   ++ I   L           P D+       L   SL Q+   + L  +    
Sbjct: 8   WGWASLPFLLLIWIALASRFPTYILPQPWDVAREALRWLGDRSLLQHLQASVLEEVGGFC 67

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            +++      T A  S R    + P+  +  +IP + +    ++ F   Y        ++
Sbjct: 68  AAVIVAIALGTGAGLSSRFRDFISPLNSLFMAIPPIAWAPLIMIIFGLGY--------VS 119

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  IF + ++ M  ++ + + +I       +R+   + WQ   ++ +P S+P +   + 
Sbjct: 120 IVLVIFIAAMFPMAVTIQEGVQSIRGGEVRAARTLGANAWQLLAHVYLPASLPFVTAALR 179

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +  S GW  +VA+EMI          GIG  ++   +  +   +L  ++ +  + +L + 
Sbjct: 180 IGFSQGWRALVAAEMIGASQ------GIGWMVSTGGQIGNSSQVLLGIVVIGLIAWLMES 233

Query: 258 LLFRPMIVWSNKFRLE 273
            +FR +     K+R++
Sbjct: 234 FVFRRIERHYQKWRVQ 249


>gi|56965478|ref|YP_177210.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911722|dbj|BAD66249.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 255

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 90/239 (37%), Gaps = 16/239 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------ITMFRVVVL 393
           + +ML + +  +   +++        +       +    ++  G       I+++R  + 
Sbjct: 10  LPWMLPLLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQISLYRAFIG 69

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I   I + +GI  G+       +  F Q++   P     PLV+  +     +      
Sbjct: 70  LLIGGAIGLLLGILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIGEASK----I 125

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+  G  + I  N + G  +    + E+   + + GW  +R++ LPG  P    G   A
Sbjct: 126 FLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLKGWGLFRHVYLPGALPSIFVGIRYA 185

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            G  W   IV+E  +       + G+G     + +      +++ ++I   F    +  
Sbjct: 186 LGVMWLTLIVAETIA------TSDGIGYLAMNARQFMQTEVIIVTIIIYALFGKLADII 238



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 97/253 (38%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L F+++  II++L +        P  +++     +   +L ++   +  R    ++I   
Sbjct: 16  LLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQISLYRAFIGLLIGGA 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L   S      +   + ++++IP L  L   +V+            E + IF 
Sbjct: 76  IGLLLGILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIG--------EASKIFL 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    + ++ R   E+ + + L GW  F ++ +P ++P +   +  ++ 
Sbjct: 128 VALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLKGWGLFRHVYLPGALPSIFVGIRYALG 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I   D      GIG     A +      I+  ++       L D   Q 
Sbjct: 188 VMWLTLIVAETIATSD------GIGYLAMNARQFMQTEVIIVTIIIYALFGKLADIIAQF 241

Query: 259 LFRPMIVWSNKFR 271
             +  + W   +R
Sbjct: 242 GEKKALRWHPNYR 254


>gi|33600057|ref|NP_887617.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
 gi|33567655|emb|CAE31569.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
          Length = 273

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 13/235 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              +  V   I                   ++    I+  RV     +A++  + +G+ +
Sbjct: 42  AATLGWVDEYILPAPTVVFTTFIDLLASGELLRDVGISALRVAQGFALAAVAGLGLGLAM 101

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     ++      ++L   P   + PL +  +             ++  G  + ILFN 
Sbjct: 102 GLSKKFNAASDFLLKILKPIPPIAWIPLAILWLGLGEA----AKVFIIFIGAVFPILFNT 157

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +         + ++A    +    + + IILPG  P  +TG       AW   + +E+ +
Sbjct: 158 LDAIRQTDGRYVDLARVLELKRGAFVQKIILPGALPQIMTGLRIGITIAWMCVVAAELIA 217

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                  ++G+G  I ++        V++G+L+        +   R +   L  +
Sbjct: 218 ------ASSGVGYLIMQARALAQSDVVIVGMLVTGLLGKLTDDALRLVERSLVKW 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 93/252 (36%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA + V  +   L    +     P  +       L    L +    + LR+     ++ +
Sbjct: 33  LALLAVWQLAATLGWVDEYILPAPTVVFTTFIDLLASGELLRDVGISALRVAQGFALAAV 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S++       +L I++ IP + ++   +++            E A +F 
Sbjct: 93  AGLGLGLAMGLSKKFNAASDFLLKILKPIPPIAWIPLAILWLGLG--------EAAKVFI 144

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   V+ + F+   ++        +++R   L        + +P ++P ++  + + ++
Sbjct: 145 IFIGAVFPILFNTLDAIRQTDGRYVDLARVLELKRGAFVQKIILPGALPQIMTGLRIGIT 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  VVA+E+I          G+G  I  A        ++  ML    +  L D   +L
Sbjct: 205 IAWMCVVAAELIAASS------GVGYLIMQARALAQSDVVIVGMLVTGLLGKLTDDALRL 258

Query: 259 LFRPMIVWSNKF 270
           + R ++ W   F
Sbjct: 259 VERSLVKWRQDF 270


>gi|299134443|ref|ZP_07027636.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298591190|gb|EFI51392.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 279

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV+     A ++ IP G+ +           P  ++L   P   + P  +     
Sbjct: 74  YLSFLRVLGGFGAAMVLGIPFGMALALNRTFYQTAFPTFEVLRPIPPLAWVPAAIL---- 129

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +     L ++ +   G  + I+ NV+ GA +    + + A +   + W  +R ++LP   
Sbjct: 130 FWPTQELSIAFITFLGAFYTIVINVVGGARSIDARYIQSAYAMGASRWTVFRRVVLPSTL 189

Query: 504 PYYVTGAITACGGAWNASIVSEVA------SWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           P  + GA    G  W   + +E+                 GLG +I  S   GS+ ++++
Sbjct: 190 PSIIVGASVGMGVTWEVVVAAEMISGGGSSMGSGTGGTGGGLGFFIWNSYTGGSYEQIIV 249

Query: 558 GVLIMCCFVLA 568
           G++ +      
Sbjct: 250 GMISIGIAGYI 260



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 14/193 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+L     +++    +    A +R       P  ++++ IP L ++   ++++    
Sbjct: 76  SFLRVLGGFGAAMVLGIPFGMALALNRTFYQTAFPTFEVLRPIPPLAWVPAAILFW---- 131

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  EL+  F  F    + +  ++     +I     + + +   S W  F  + +P 
Sbjct: 132 ----PTQELSIAFITFLGAFYTIVINVVGGARSIDARYIQSAYAMGASRWTVFRRVVLPS 187

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI------VVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++P ++    + M   W  VVA+EMI      +   T     G+G +I  +        I
Sbjct: 188 TLPSIIVGASVGMGVTWEVVVAAEMISGGGSSMGSGTGGTGGGLGFFIWNSYTGGSYEQI 247

Query: 242 LYAMLTMLGVIFL 254
           +  M+++    ++
Sbjct: 248 IVGMISIGIAGYI 260


>gi|160941503|ref|ZP_02088837.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435587|gb|EDP13354.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC
           BAA-613]
          Length = 277

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++   +   + A II +P+ + +G+  +    I+P  +L+   P   + PLVV  +  
Sbjct: 84  LASLQVALSGFLAAIIIGVPLELVMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +L++ F      + N   G          V+ +F  +    +  + +P   
Sbjct: 144 GLK----AKALIIFFTAFVPCVINSYTGIKLTNKTLINVSRTFGASNAEIFWKVGVPSSL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   A G +W+  + +E+ +       + GLG  I           V++G++++ 
Sbjct: 200 PMVFAGIRVALGNSWSTLVAAEMLA------ASAGLGYMIQIGRTVARPDIVIVGMVVIG 253

Query: 564 CFVLALNRFL 573
                L+ FL
Sbjct: 254 AIGAILSGFL 263



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 94/255 (36%), Gaps = 23/255 (9%)

Query: 21  DLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLRMLS 74
            ++  + V  ++  L L   +    P  I + +         D + L      +    LS
Sbjct: 33  GIITLLAVWQLVVSLGLVNERMLPAPTQIFETLMYKFANKAPDGNVLWVNILASLQVALS 92

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             + +++       +          + PI ++++ +P + ++   VV+       K +  
Sbjct: 93  GFLAAIIIGVPLELVMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGIGLKAKAL-- 150

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  IF +       + Y  +    + L  VSR+F  S  + FW +GVP S+P +  
Sbjct: 151 ------IIFFTAFVPCVINSYTGIKLTNKTLINVSRTFGASNAEIFWKVGVPSSLPMVFA 204

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++   W  +VA+EM+          G+G  I +         ++  M+ +  +  +
Sbjct: 205 GIRVALGNSWSTLVAAEMLAASA------GLGYMIQIGRTVARPDIVIVGMVVIGAIGAI 258

Query: 255 YDQLLFR---PMIVW 266
               L R     + W
Sbjct: 259 LSGFLSRAEKYFLRW 273


>gi|115359312|ref|YP_776450.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170697541|ref|ZP_02888631.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           IOP40-10]
 gi|172064102|ref|YP_001811753.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MC40-6]
 gi|115284600|gb|ABI90116.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170137564|gb|EDT05802.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           IOP40-10]
 gi|171996619|gb|ACB67537.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MC40-6]
          Length = 298

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++  S        +     + R +  +          +     ++  + +  + V 
Sbjct: 6   PLGTWVDRSVHYLLDHDAATFDAIGRAIEGLAAFVEHGLQAIPMWLMMAIFIGVGLWRVG 65

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+      +      F  Q V        IT+   +   II+ ++ IP+GIW     
Sbjct: 66  WRFALFTTLSLLLIFATGFWDQTV--------ITLGLTLSSTIISLVLGIPLGIWAAKSK 117

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++ ++P   L+   PA V+            +   L   +  +             G 
Sbjct: 118 LVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGI 173

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                +  E   +F  T W+    +  P   P  + G       A +  I++ +   G  
Sbjct: 174 RHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-- 231

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  S ++          L +    + L+R 
Sbjct: 232 -----GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|330901731|gb|EGH33150.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 232

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   ML A +I++L       L+A+S RL  VL+P+LDIMQ++P   +L   
Sbjct: 36  GLWDKLMQTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPV 95

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ AIFA        +       +  +  ++ E   +F  + WQ+
Sbjct: 96  LMLFGLG--------KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQ 147

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  +       VV + MI          G+G  + + I+  ++ 
Sbjct: 148 LFGVQLPLAMPSIMAGINQTTMMALSMVVIASMI-------GARGLGEDVLVGIQTLNVG 200

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ +  + D++
Sbjct: 201 RGLEAGLAIVILAVVIDRI 219



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 80/228 (35%), Gaps = 17/228 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPV 404
           ++  +  GIAW +   IV       +L+++    +      T+  ++V  IIA +I IP+
Sbjct: 3   LMLMIVGGIAWHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPL 62

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       + S + P   ++   P+ V+   V+           +      +      +
Sbjct: 63  GILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLG----KVPAIFATVIYAAPPL 118

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E  ++F    W+    + LP   P  + G       A +  +++
Sbjct: 119 IRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSMVVIA 178

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 179 SMIG-------ARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRI 219


>gi|312197288|ref|YP_004017349.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311228624|gb|ADP81479.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 319

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 94/272 (34%), Gaps = 24/272 (8%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AW 361
           S ++ +     G  R   P   L+      V   + + W        I            
Sbjct: 47  SRDLSRSAPAAGDRRGGSPVRGLRRALRLAVPVAVLVAWAVGSETGLIPARILDSPPTVV 106

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            ++G++++    QD L       I++ R  V + +   + +  G+  G        +   
Sbjct: 107 DALGHLISTHQLQDALS------ISLRRAGVGLALGLAVGLVFGLTTGLSRLGEELLDAT 160

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q++   P     PLVV              ++L+ F   + I  N  A   A      E
Sbjct: 161 MQMVRMIPFLAITPLVVVWFGIGET----AKTVLIAFACTFPIYLNTYAAVRAIDPKLIE 216

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A  F + G+   R II+P   P  + G   + G +  A I +E  +        +GLG 
Sbjct: 217 AARVFGVRGFALTRRIIIPNAMPGILVGLRYSMGVSILALIAAEQIN------ADSGLGY 270

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +  + +      ++  +L+     L ++ F+
Sbjct: 271 LVGNAQDAFRNDIILALLLVYTVLGLLIDLFV 302



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 24/254 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-------HSLPQYASRTTLRMLSA 75
           L   + + ++     G +   +P  I+D  P  +D        H L    S +  R    
Sbjct: 73  LRLAVPVAVLVAWAVGSETGLIPARILDSPPTVVDALGHLISTHQLQDALSISLRRAGVG 132

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + + L    V+      SR    +L   + +++ IP L      VV+F           E
Sbjct: 133 LALGLAVGLVFGLTTGLSRLGEELLDATMQMVRMIPFLAITPLVVVWFGIG--------E 184

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A    I  +  + +  + Y ++  I   L E +R F + G+     + +P +MPG++  
Sbjct: 185 TAKTVLIAFACTFPIYLNTYAAVRAIDPKLIEAARVFGVRGFALTRRIIIPNAMPGILVG 244

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  SM      ++A+E I          G+G  +  A        IL  +L    +  L 
Sbjct: 245 LRYSMGVSILALIAAEQINADS------GLGYLVGNAQDAFRNDIILALLLVYTVLGLLI 298

Query: 256 D---QLLFRPMIVW 266
           D   ++L R ++ W
Sbjct: 299 DLFVRILERVLLPW 312


>gi|167585326|ref|ZP_02377714.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 322

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 90/275 (32%), Gaps = 17/275 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF------WFCVVCGVAIGIA 360
           +P    V +  R     R         L +    +  +  +      W   +   A    
Sbjct: 47  APPRERVARPARASRRYRLPGQGKTGALSAATVAALAVLWWAATHRQWLPPLFLPAPEAV 106

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W +      H   Q  L +      +  RV    ++A+ + +P GI +G        + P
Sbjct: 107 WAAF-VDAWHGRIQGGLPLSGHLLWSAARVFGAFVLATALGVPAGILMGVSRVARGVLDP 165

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             +     P   + PLVV               +++       +     AG  A   +  
Sbjct: 166 LLEFYRPLPPLAYLPLVVIWFGI----DETAKLVVIFLACFAPVAMAARAGVRAATVEQI 221

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A S   +  +  R+++LP   P  +TG   A G  W   + +E+ +       T GLG
Sbjct: 222 NAAYSLGGSFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLG 275

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +  ++       VV+G+LI+       +  +  
Sbjct: 276 QMVLNASSFLRTDIVVMGILIIGAIAWLFDLGMRR 310



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+  A V++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 124 LSGHLLWSAARVFGAFVLATALGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVV 183

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 184 IWFGID--------ETAKLVVIFLACFAPVAMAARAGVRAATVEQINAAYSLGGSFAQIV 235

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 236 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 289

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 290 VVMGILIIGAIAWLFDLGMRRVERRVVPWKGR 321


>gi|225628905|ref|ZP_03786939.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
 gi|237817212|ref|ZP_04596204.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|260756762|ref|ZP_05869110.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260760192|ref|ZP_05872540.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260763431|ref|ZP_05875763.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882577|ref|ZP_05894191.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261217092|ref|ZP_05931373.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261220306|ref|ZP_05934587.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261313461|ref|ZP_05952658.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261319303|ref|ZP_05958500.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261319962|ref|ZP_05959159.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261753459|ref|ZP_05997168.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|265986697|ref|ZP_06099254.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265996347|ref|ZP_06108904.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|297249709|ref|ZP_06933410.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|225616751|gb|EEH13799.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
 gi|237788025|gb|EEP62241.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|260670510|gb|EEX57450.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260673852|gb|EEX60673.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676870|gb|EEX63691.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260872105|gb|EEX79174.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|260918890|gb|EEX85543.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|260922181|gb|EEX88749.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261292652|gb|EEX96148.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261298526|gb|EEY02023.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261302487|gb|EEY05984.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261743212|gb|EEY31138.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|262550644|gb|EEZ06805.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|264658894|gb|EEZ29155.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|297173578|gb|EFH32942.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 284

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 95  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 153 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 211 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 264

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 265 GLIVNVVI-----GWVERRF 279



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|19224203|gb|AAL86439.1|AF475089_2 transmembrane protein OtaB [Methanosarcina mazei Go1]
          Length = 277

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84
           ++   +I  L +   +  +   +   V + L +   L   +  T   ++S+  ++L+   
Sbjct: 51  LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110

Query: 85  VYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
               LAA  S     VL PILD+MQ++P   +L   +++F     G V G     +FA+ 
Sbjct: 111 PLGILAANISDFFFNVLKPILDLMQTMPSFVYLIPALIFFGL---GNVPGMIATLVFAMP 167

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +PR+L+EV+ +F  + WQK   + +P ++P ++  +   +   
Sbjct: 168 -----PTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLS 222

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI          G+G  +   I+  D+     A L ++ +  + D++
Sbjct: 223 LSMVVIAAMI-------GARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 270



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 15/231 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHF---TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +  ++  +A     +++   V  F      + L +  L   T+  V+    +A +I I
Sbjct: 51  LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110

Query: 403 PVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+GI          + ++P   L+   P+ V+    +      ++   +   +       
Sbjct: 111 PLGILAANISDFFFNVLKPILDLMQTMPSFVYLIPALIFFGLGNVPGMIATLVF----AM 166

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
              +     G    P + KEVA +F  T W+    + LP   P  + G       + +  
Sbjct: 167 PPTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSLSMV 226

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +    ++          L +    + L+R 
Sbjct: 227 VIAAMIG-------ARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 270


>gi|260555524|ref|ZP_05827745.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|260412066|gb|EEX05363.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
          Length = 314

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALN 570
            L  +
Sbjct: 292 GLVCD 296



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D +L +
Sbjct: 287 IIGVIGLVCDWVLMK 301


>gi|91762081|ref|ZP_01264046.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717883|gb|EAS84533.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 501

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   + +A V+S+          A+ +R   ++ PI+D MQ++P   F+   + +F 
Sbjct: 316 AMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFG 375

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++AA+          +       L  +P  + E + ++  + W     + 
Sbjct: 376 TG--------KVAAVIITMIFGGTPVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVD 427

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  ++      VV + +I          G+G  +  A++  ++   + A
Sbjct: 428 LPLATPSILAGVNQTVMLSLAMVVVASLI-------GAKGLGQDVLEALQYANVGQGILA 480

Query: 245 MLTMLGVIFLYDQLL 259
            + +L V  + D+++
Sbjct: 481 GIAILFVALILDRVV 495



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V     +    +V    +    ++  Y      Y   L        T+  +    +++  
Sbjct: 273 VKTPWIVIITAIVTLTGLSAGPRAAIYSTGFLCYMGFLGFWVKAMTTLALLGTAAVLSIA 332

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI+   R    S I+P    +   PA VF    +  ++++       + + MIFG
Sbjct: 333 IGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFM---IPVIAFFGTGKVAAVIITMIFG 389

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A ++  T W   R + LP   P  + G       +  
Sbjct: 390 GT-PVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVDLPLATPSILAGVNQTVMLSLA 448

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L  + +    L L+R +
Sbjct: 449 MVVVASLIG-------AKGLGQDVLEALQYANVGQGILAGIAILFVALILDRVV 495


>gi|89893966|ref|YP_517453.1| hypothetical protein DSY1220 [Desulfitobacterium hafniense Y51]
 gi|219668341|ref|YP_002458776.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|89333414|dbj|BAE83009.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538601|gb|ACL20340.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 279

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 98/239 (41%), Gaps = 16/239 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D++ + +++ +   L    +   +       + +  ++  L      T + +L A ++S
Sbjct: 43  LDVVPWFILVLLFAALAWRAKGWRLALGTTVGLCLIYNL-ELWPAFLDTLILVLLASLVS 101

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+       L A+      VL PILD MQ++P   +L   +++F            ++AI
Sbjct: 102 LVIGIPLGILGARHNGFHRVLSPILDFMQTMPSFVYLIPALMFFSLG--------TVSAI 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA     +  +       +  +P DL EV  +F  +  Q  W + +P ++P ++  +  +
Sbjct: 154 FATVIFAMPPVIRLTALGIRQVPADLVEVGEAFGSNSRQMLWKIQLPLALPTIMAGINQT 213

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           M      VV S MI          G+G+ +   I   D+       L ++ +  + D+L
Sbjct: 214 MMLSLSMVVISAMI-------GAQGLGAGVLAGISGMDIGKGFEYGLAVVILAMILDRL 265



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-----LYVIWLGCITMFRVVVLI 394
           +   LD+  + ++  +   +AW++ G+ +   T   +     L +      T+  V++  
Sbjct: 39  MREGLDVVPWFILVLLFAALAWRAKGWRLALGTTVGLCLIYNLELWPAFLDTLILVLLAS 98

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++ +I IP+GI           + P    +   P+ V+    +   S   ++      +
Sbjct: 99  LVSLVIGIPLGILGARHNGFHRVLSPILDFMQTMPSFVYLIPALMFFSLGTVSAIFATVI 158

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                    ++     G    P D  EV  +F     +    I LP   P  + G     
Sbjct: 159 F----AMPPVIRLTALGIRQVPADLVEVGEAFGSNSRQMLWKIQLPLALPTIMAGINQTM 214

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  ++S +           GLGA +          +     L +    + L+R 
Sbjct: 215 MLSLSMVVISAMIG-------AQGLGAGVLAGISGMDIGKGFEYGLAVVILAMILDRL 265


>gi|167042039|gb|ABZ06775.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_141F21]
          Length = 295

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T   +     + +        L +KS R    ++P+LD+MQ+IP   +L   ++    
Sbjct: 101 MATVAIITVCTTLCIAVGIPLGVLMSKSDRAEKTILPVLDMMQTIPSFVYLVPILMLLG- 159

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              GKV G     I+A+       +       +  + ++  E   +F  + WQ+   + +
Sbjct: 160 --IGKVPGLIAVCIYAVP-----PIIRLTNLGIREVDKETLEAIDAFGATTWQRLTKVQI 212

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   +  ++      VV + MI V        G+G  I  AI  Q L   L   
Sbjct: 213 PLALPTIFAGVNQTIMMALAMVVIASMIGV-------KGLGVPILRAISNQYLALGLMNG 265

Query: 246 LTMLGVIFLYDQL 258
           L ++ +  ++D++
Sbjct: 266 LAIVALAIIFDRV 278



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 81/276 (29%), Gaps = 18/276 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           + I  S   F     N ++     L        +  L       +  +  + WF     V
Sbjct: 20  KGIDLSFRQFSREYGNGIEAFFDPLLFFLVWLEKLLLNSPWPIIILVIAILAWFGSRSWV 79

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  +  +   I     + D +        T+  + V   +   + IP+G+ +       
Sbjct: 80  LVVGSALAFMLIGYFGMWNDCM-------ATVAIITVCTTLCIAVGIPLGVLMSKSDRAE 132

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I P   ++   P+ V+   ++  +        +   + +       I+     G    
Sbjct: 133 KTILPVLDMMQTIPSFVYLVPILMLLGIG----KVPGLIAVCIYAVPPIIRLTNLGIREV 188

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E   +F  T W+    + +P   P    G       A    +++ +         
Sbjct: 189 DKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALAMVVIASMIG------- 241

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  I  +         ++  L +    +  +R
Sbjct: 242 VKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDR 277


>gi|89895229|ref|YP_518716.1| hypothetical protein DSY2483 [Desulfitobacterium hafniense Y51]
 gi|89334677|dbj|BAE84272.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 252

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR+ V + I   + +P+G++IG        I P    L   P   + P+ +  +    
Sbjct: 62  SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFILWLGIGE 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    LM++   + +  N + G  +     KEVA +F +       ++ LP   P+
Sbjct: 122 A----MKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARIIHVYLPSAAPH 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G        W A + +E+ +       + GLG  + E         + + + I+   
Sbjct: 178 FFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEGRNLAQAELIFVSIFIIGSL 231

Query: 566 VLALN 570
              ++
Sbjct: 232 GALID 236



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+I   +F  L  +L  G+             P DI+      L    +  +   +  R+
Sbjct: 7   RKIHGLVFPALLIILWQGVSYFGWVNPYLLPSPGDIIGAFTELLFTGEIFTHIKSSLFRL 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              M I++              R    + P L  +Q IP + ++   +++          
Sbjct: 67  GVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFILWLGIG------ 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I  +  +  + +  +    + ++ + L+EV+++F L    +  ++ +P + P  
Sbjct: 121 --EAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARIIHVYLPSAAPHF 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +  S  W  +VA+E+I          G+G  +           I  ++  +  + 
Sbjct: 179 FVGIRLGFSNCWRALVAAEIIASSK------GLGYLLMEGRNLAQAELIFVSIFIIGSLG 232

Query: 253 FLYD 256
            L D
Sbjct: 233 ALID 236


>gi|269124729|ref|YP_003298099.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268309687|gb|ACY96061.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 273

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 12/267 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P  +  +   R   V         L+  S   +  +  +     +    +  A  +I  
Sbjct: 3   APSIDLARPAGRVRNVPIRLPRGALLRAASPLALLVLWQLASSTGLLSDRLLAAPSTIA- 61

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       +     +++ R  +   + +I  I + +  G        + P  Q+L 
Sbjct: 62  -ATALDLLQDGTLTGAIGVSLRRAALGFALGAIAGIGLALIAGLSRLGEHAVDPPMQMLR 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL +                L+ FG  + +  N  AG         E+    
Sbjct: 121 ALPLFGLIPLFILWFGIGET----PKIALVAFGVAFPLYLNTYAGIRGVDAKLAELGKVL 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++     R+I+LPG  P  + G   + G AW A IV+E  +         GLG  I ++
Sbjct: 177 RLSRAALIRHIVLPGALPQTLVGLRQSLGVAWLALIVAEQIN------ANQGLGFMINDA 230

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E      VV+G+L      L  + F+
Sbjct: 231 REFLRTDIVVVGLLTYAALGLLTDAFV 257



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 18/267 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P  + R         LA +++  + +   L   +    P  I       L   +L     
Sbjct: 19  PIRLPRGALLRAASPLALLVLWQLASSTGLLSDRLLAAPSTIAATALDLLQDGTLTGAIG 78

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R      +  +     A +A  SR     + P + +++++P+ G +   +++F   
Sbjct: 79  VSLRRAALGFALGAIAGIGLALIAGLSRLGEHAVDPPMQMLRALPLFGLIPLFILWFGIG 138

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  +     + +  + Y  +  +   L E+ +  RLS      ++ +P
Sbjct: 139 ETPK--------IALVAFGVAFPLYLNTYAGIRGVDAKLAELGKVLRLSRAALIRHIVLP 190

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P  +  +  S+   W  ++ +E I          G+G  I  A +      ++  +L
Sbjct: 191 GALPQTLVGLRQSLGVAWLALIVAEQINANQ------GLGFMINDAREFLRTDIVVVGLL 244

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKF 270
           T   +  L D   +LL R  + W  +F
Sbjct: 245 TYAALGLLTDAFVRLLERRALSWRRQF 271


>gi|116687129|ref|YP_840376.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|116652844|gb|ABK13483.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 288

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 10/232 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
              P    ++         L +    V  G        +   I++      V+ V     
Sbjct: 27  RRDPLRAWRIAGLALPFAALVLLEIVVRRGWLPDHLVPAPSEILDTLARMGVIRVARHVG 86

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV       + + + VG  +G    I +  +P  Q L A P+  + P+++  +   
Sbjct: 87  ASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGI- 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V+AG         E+ + + +     +R I+LP   P
Sbjct: 146 ---DEAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             VTG  T    AW   + +E+ +       T GLG  +++  E G    V 
Sbjct: 203 QIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLVF 248



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSLPQYA 65
           +RR     + +    L    + +L   ++   +P  +V      LD      V  + ++ 
Sbjct: 26  ARRDPLRAWRIAGLALPFAALVLLEIVVRRGWLPDHLVPAPSEILDTLARMGVIRVARHV 85

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +TLR+ +          V       SRR+  +  P    +++IP L ++   +++   
Sbjct: 86  GASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGI 145

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E   I  I     + +  ++   + ++ R L E+   +RL     F  + +
Sbjct: 146 D--------EAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILL 197

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +  A+
Sbjct: 198 PAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLVFGAI 251

Query: 246 LTMLGVIFLYDQLLFRPMIVW 266
           L +  +  L D  + R    W
Sbjct: 252 LLLALLGKLTDGAMRRIESRW 272


>gi|260549620|ref|ZP_05823838.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624]
 gi|260407413|gb|EEX00888.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624]
          Length = 314

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 292 GLVCDWLL 299



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D LL +
Sbjct: 287 IIGVIGLVCDWLLMK 301


>gi|330467532|ref|YP_004405275.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Verrucosispora maris AB-18-032]
 gi|328810503|gb|AEB44675.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Verrucosispora maris AB-18-032]
          Length = 276

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 16/238 (6%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVV 392
           R+   +      ++    +   + +        T+Q  + ++  G +      +  R++ 
Sbjct: 31  RIGLSVLSVALGILVWDLVSRNYTAFFLPSPMLTWQGAVDLVRDGTLWDSVTASSTRILT 90

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +  +I +PVG+ +G  P +   + P+ Q     P   F  L +  +     +     
Sbjct: 91  GWALGVVIGVPVGLLMGCIPWLRLMLDPYIQFFRFVPPIAFVTLAIIWLGPGEASK---- 146

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+ + T + +  N +AG  A  +     A +   +  R    ++LP   P+ VTGA  
Sbjct: 147 VALIFYTTVFIVALNTLAGVLAVDDLRLRAARALGASPLRTLVSVVLPSTVPHVVTGARL 206

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A G ++   + +E+ +        +GLG+ I  +        V +G+L +       +
Sbjct: 207 AMGNSFLTIVSAEIVA------AQSGLGSLIWTARNYAKTEWVFVGILALGLLGYLFD 258



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 96/245 (39%), Gaps = 15/245 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI  ++  +   +LV  +++         +        V +  D  +L    + ++ R+L
Sbjct: 31  RIGLSVLSVALGILVWDLVSRNYTAFFLPSPMLTWQGAVDLVRD-GTLWDSVTASSTRIL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   + ++       L      L ++L P +   + +P + F+T  +++           
Sbjct: 90  TGWALGVVIGVPVGLLMGCIPWLRLMLDPYIQFFRFVPPIAFVTLAIIWLGPG------- 142

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + +  IF + V+ +  +    +  +       +R+   S  +    + +P ++P +V
Sbjct: 143 -EASKVALIFYTTVFIVALNTLAGVLAVDDLRLRAARALGASPLRTLVSVVLPSTVPHVV 201

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
               ++M   +  +V++E++          G+GS I  A        +   +L +  + +
Sbjct: 202 TGARLAMGNSFLTIVSAEIVA------AQSGLGSLIWTARNYAKTEWVFVGILALGLLGY 255

Query: 254 LYDQL 258
           L+D +
Sbjct: 256 LFDWI 260


>gi|150398812|ref|YP_001322579.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
 gi|150011515|gb|ABR53967.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus vannielii SB]
          Length = 277

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   +L++ +I+LL       L A+S+ + +++ PILDIMQ++P L +L   
Sbjct: 85  GLWNMSIATISLILTSTIIALLIGIPLGILKARSKTINLIISPILDIMQTLPSLAYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     IFA+  +            +  +  +L EV R+F  + WQ 
Sbjct: 145 VLFFG---IGEVPGIIATVIFAMPPA-----IKLTALGIEQVSDELVEVGRAFGSTSWQI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L 
Sbjct: 197 LTKIELPTALPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLA 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A + +  +  ++D++
Sbjct: 250 PALEAGIAVTFLAMIFDRI 268



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 11/212 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
            +++ + V   +   ++ +  +   T+  ++   IIA +I IP+GI       I+  I P
Sbjct: 68  LKTVPFAVIFLSIILMMGLWNMSIATISLILTSTIIALLIGIPLGILKARSKTINLIISP 127

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              ++   P+  +    V       +   +   +          +     G     ++  
Sbjct: 128 ILDIMQTLPSLAYLIPAVLFFGIGEVPGIIATVIF----AMPPAIKLTALGIEQVSDELV 183

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EV  +F  T W+    I LP   P  + G   A   +++  +++     G       GLG
Sbjct: 184 EVGRAFGSTSWQILTKIELPTALPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLG 236

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             I    ++ S    +   + +    +  +R 
Sbjct: 237 EVIISGIQRYSLAPALEAGIAVTFLAMIFDRI 268


>gi|253995479|ref|YP_003047543.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
 gi|253982158|gb|ACT47016.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
          Length = 258

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              +L    +       ++    P  +            L  +   +  R++    I  L
Sbjct: 22  AVLLLAWAWVCSAGIFPEQILVSPAGVYQTAHELWGNGELQSHLHDSLYRLVLGFAIGSL 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V+  L    + +     P  + ++ +P + F+   V+ F           E   I  
Sbjct: 82  LGLVFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPMLVMIFGVE--------ETFKIVV 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + +T + Y ++ NIP    EVS+ ++LS       + +P ++P ++  + +++ 
Sbjct: 134 VAKAAFFPITLATYDAVKNIPSSYFEVSKVYQLSHVSLVRQVILPATVPPILTGLRLALG 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +VA+E+I          GIG  + +  +   +  +L  +L    + FL D+ L
Sbjct: 194 RSWMVLVAAELIAADS------GIGQMMEMGRQMFRIDIVLVGVLVTGVIGFLLDRSL 245



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W C        I     G             +      +++R+V+   I S++ +
Sbjct: 25  LLAWAWVCSAGIFPEQILVSPAGVYQTAHELWGNGELQSHLHDSLYRLVLGFAIGSLLGL 84

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G+ +G    I +   P    L   P   F P++V            +  +++     +
Sbjct: 85  VFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPMLVMIFGVEET----FKIVVVAKAAFF 140

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I           P+ + EV+  + ++     R +ILP   P  +TG   A G +W   +
Sbjct: 141 PITLATYDAVKNIPSSYFEVSKVYQLSHVSLVRQVILPATVPPILTGLRLALGRSWMVLV 200

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +E+ +        +G+G  +    +      V++GVL+       L+R
Sbjct: 201 AAELIA------ADSGIGQMMEMGRQMFRIDIVLVGVLVTGVIGFLLDR 243


>gi|107029257|ref|YP_626352.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|105898421|gb|ABF81379.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
          Length = 285

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 10/232 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
              P    ++         L +    V  G        +   I++      V+ V     
Sbjct: 24  RRDPLRAWRIAGLALPFAALVLLEIVVRRGWLPDHLVPAPSEILDTLARMGVIRVARHVG 83

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV       + + + VG  +G    I +  +P  Q L A P+  + P+++  +   
Sbjct: 84  ASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGI- 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V+AG         E+ + + +     +R I+LP   P
Sbjct: 143 ---DEAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             VTG  T    AW   + +E+ +       T GLG  +++  E G    V 
Sbjct: 200 QIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLVF 245



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSLPQYA 65
           +RR     + +    L    + +L   ++   +P  +V      LD      V  + ++ 
Sbjct: 23  ARRDPLRAWRIAGLALPFAALVLLEIVVRRGWLPDHLVPAPSEILDTLARMGVIRVARHV 82

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +TLR+ +          V       SRR+  +  P    +++IP L ++   +++   
Sbjct: 83  GASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLLLWLGI 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E   I  I     + +  ++   + ++ R L E+   +RL     F  + +
Sbjct: 143 D--------EAPKITLIAIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +V  +   +S  W F+VA+E+I          G+G  ++   +      +  A+
Sbjct: 195 PAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLVFGAI 248

Query: 246 LTMLGVIFLYDQLLFRPMIVW 266
           L +  +  L D  + R    W
Sbjct: 249 LLLALLGKLTDGAMRRIESRW 269


>gi|239814915|ref|YP_002943825.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801492|gb|ACS18559.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 282

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 98/262 (37%), Gaps = 21/262 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVH 59
            P    RRI       L ++L I ++ +   G ++          P+ + + +       
Sbjct: 20  RPLLPWRRIGRLGEGALPWLLPIALLALWFTGAEQGWISPQVLPPPQFVWETLRDLATSG 79

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  + S +  R+        L      +    SR     ++P  + +  IP+L +L F 
Sbjct: 80  DLWLHVSTSFNRVGVGFAAGTLLGLALGSAMGLSRSFETYVLPSFNALVQIPVLAWLPFV 139

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++      P K I         I  + +  +  +  Q     P  L EV + +  +  Q+
Sbjct: 140 LLIVGIGEPLKYI--------LIAKAALVPVALNTLQGFRQTPSALREVGQVYGYTRRQQ 191

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P L   + +  +  W  +V  E++   +      G+G  I    +   L 
Sbjct: 192 VLEIVLPHAVPTLFTGVRLGFTKAWLSLVVVELVASSE------GLGYLIVYGRQLFQLD 245

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
            ++ A++ +  + +  D+LL R
Sbjct: 246 LVMAAVIVVGVIGYAIDRLLDR 267



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 17/274 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA--IGIAWQSI---GYIVNHF 371
            R     R   P   +       + ++L I    +    A    I+ Q +    ++    
Sbjct: 13  PRDAAPARPLLPWRRIGRLGEGALPWLLPIALLALWFTGAEQGWISPQVLPPPQFVWETL 72

Query: 372 TYQDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +WL   T F RV V     +++ + +G  +G      + + P    L   P 
Sbjct: 73  RDLATSGDLWLHVSTSFNRVGVGFAAGTLLGLALGSAMGLSRSFETYVLPSFNALVQIPV 132

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P V+  V            +L+       +  N + G    P+  +EV   +  T 
Sbjct: 133 LAWLPFVLLIVGIG----EPLKYILIAKAALVPVALNTLQGFRQTPSALREVGQVYGYTR 188

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    I+LP   P   TG       AW + +V E+ +       + GLG  I    +  
Sbjct: 189 RQQVLEIVLPHAVPTLFTGVRLGFTKAWLSLVVVELVA------SSEGLGYLIVYGRQLF 242

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
               V+  V+++     A++R L   L     R 
Sbjct: 243 QLDLVMAAVIVVGVIGYAIDRLL-DRLETSMRRR 275


>gi|295835830|ref|ZP_06822763.1| ABC transporter, permease [Streptomyces sp. SPB74]
 gi|295825724|gb|EFG64431.1| ABC transporter, permease [Streptomyces sp. SPB74]
          Length = 299

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 89/235 (37%), Gaps = 10/235 (4%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++   +    +   P  + D +        L  Y   +  R L   V++L+       L 
Sbjct: 63  LVWAKVTDSYKLPAPGAVWDELSEAWTRGKLLGYIWTSVERGLFGFVLALVIGTPLGLLV 122

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++ R +   + PIL  +QS+P + ++   V++                   I    V ++
Sbjct: 123 SRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGLNSSMMYA--------VILLGAVPSI 174

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +   +  +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+
Sbjct: 175 ANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAA 234

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           E+I     +    G+G  +        +  +  A+  +L V    D L+F P+  
Sbjct: 235 EIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 287



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R +   ++A +I  P+G+ +     + + I P    L + P+  + P 
Sbjct: 91  GKLLGYIWTSVERGLFGFVLALVIGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPP 150

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +       +  +  +++ G    I   +++G    P  +     +   TG R   +
Sbjct: 151 AVLWLGL----NSSMMYAVILLGAVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWH 206

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P Y+ G       +W + + +E+ +         GLG  +       S   V 
Sbjct: 207 IVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVF 264

Query: 557 LGVLIMCCFVLALNRFLWHPLYL 579
           L + ++    +A++  ++ PL  
Sbjct: 265 LAIFLILIVGIAIDLLIFSPLER 287


>gi|262278636|ref|ZP_06056421.1| taurine transport system permease tauC [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258987|gb|EEY77720.1| taurine transport system permease tauC [Acinetobacter calcoaceticus
           RUH2202]
          Length = 314

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALN 570
            L  +
Sbjct: 292 GLVCD 296



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D +L +
Sbjct: 287 IIGVIGLVCDWVLMK 301


>gi|71083501|ref|YP_266220.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062614|gb|AAZ21617.1| Glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 501

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   + +A V+S+          A+ +R   ++ PI+D MQ++P   F+   + +F 
Sbjct: 316 AMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFG 375

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++AA+          +       L  +P  + E + ++  + W     + 
Sbjct: 376 TG--------KVAAVIITMIFGGTPVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVD 427

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  ++      VV + +I          G+G  +  A++  ++   + A
Sbjct: 428 LPLATPSILAGVNQTVMLSLAMVVVASLI-------GAKGLGQDVLEALQYANVGQGILA 480

Query: 245 MLTMLGVIFLYDQLL 259
            + +L V  + D+++
Sbjct: 481 GIAILFVALILDRVV 495



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V     +    +V    +    ++  Y      Y   L        T+  +    +++  
Sbjct: 273 VKTPWIVIITAIVTLTGLSAGPRAAIYSTGFLCYMGFLGFWVKAMTTLALLGTAAVLSIA 332

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI+   R    S I+P    +   PA VF    +  ++++       + + MIFG
Sbjct: 333 IGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFM---IPVIAFFGTGKVAAVIITMIFG 389

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A ++  T W   R + LP   P  + G       +  
Sbjct: 390 GT-PVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVDLPLATPSILAGVNQTVMLSLA 448

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L  + +    L L+R +
Sbjct: 449 MVVVASLIG-------AKGLGQDVLEALQYANVGQGILAGIAILFVALILDRVV 495


>gi|330819748|ref|YP_004348610.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia gladioli BSR3]
 gi|327371743|gb|AEA63098.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia gladioli BSR3]
          Length = 297

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVIS 79
            L A  + + +   +  G+        I   + + L   +        T    LS+ +IS
Sbjct: 43  GLQAIPMWLLMAIFIGVGLWRVGWRFAIFTTLALLLIFATGFWDQTVITLGLTLSSTIIS 102

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V G     I
Sbjct: 103 LVLGIPLGIWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLFGL---GRVPGILSTVI 159

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P ++  +  +
Sbjct: 160 FAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQT 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      V+ + M+  G       G+G+ +  +I+  D+     + L+++ +  + D++
Sbjct: 215 IMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 92/274 (33%), Gaps = 18/274 (6%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQS 363
             PL   V +  R L        +   Q+  +    V + L      ++  + IG+    
Sbjct: 4   LIPLGTWVDQSVRYLLDHDAKTFDAIGQVIESLAALVEHGLQAIPMWLLMAIFIGVGLWR 63

Query: 364 IGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +G+    FT   +L +   G      IT+   +   II+ ++ IP+GIW      +S+ +
Sbjct: 64  VGWRFAIFTTLALLLIFATGFWDQTVITLGLTLSSTIISLVLGIPLGIWAAKSKWVSAIV 123

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P   L+   PA V+            +   L   +  +             G      +
Sbjct: 124 RPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGIRHVNRE 179

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E   +F  T W+    +  P   P  + G       A +  I++ +   G       G
Sbjct: 180 IVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-------G 232

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           LG  +  S ++          L +    + L+R 
Sbjct: 233 LGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|282901010|ref|ZP_06308943.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
 gi|281194101|gb|EFA69065.1| Binding-protein-dependent transport systems inner membrane
           component [Cylindrospermopsis raciborskii CS-505]
          Length = 287

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 70/209 (33%), Gaps = 10/209 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  I           +     I+  R +   ++   I   +G+  G  P     I    Q
Sbjct: 71  LAVIAAAIKMGASGELFRNIGISAARAISGFLLGGSIGFSLGLINGIWPIAEKLIDTSIQ 130

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   P     PLV+          +     L+  G  + I  N   G  +      E+ 
Sbjct: 131 MLRNIPNLALIPLVILWFGIG----DEARLFLVSLGVMFPIYLNTFHGIRSVDPGLIEMG 186

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + +T W  +  IILPG     + G   + G  W   IV+E  +        +G+G   
Sbjct: 187 RIYGLTPWGLFWRIILPGAMSSILVGVRFSLGIMWLTLIVAETIA------ADSGIGYMA 240

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + E      VVL +LI  CF    +  
Sbjct: 241 MNAREFMQTDVVVLSILIYACFGKLADVI 269



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 86/232 (37%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++           L +    +  R +S  ++     F    +         ++ 
Sbjct: 67  LPAPLAVIAAAIKMGASGELFRNIGISAARAISGFLLGGSIGFSLGLINGIWPIAEKLID 126

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           + A +F +    ++ +  + +  + ++
Sbjct: 127 TSIQMLRNIPNLALIPLVILWFGIG--------DEARLFLVSLGVMFPIYLNTFHGIRSV 178

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R + L+ W  FW + +P +M  ++  +  S+   W  ++ +E I        
Sbjct: 179 DPGLIEMGRIYGLTPWGLFWRIILPGAMSSILVGVRFSLGIMWLTLIVAETIAADS---- 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             GIG     A +      ++ ++L       L D +   L R  + W+  +
Sbjct: 235 --GIGYMAMNAREFMQTDVVVLSILIYACFGKLADVIAKSLERYWLQWNPGY 284


>gi|269104887|ref|ZP_06157583.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161527|gb|EEZ40024.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 296

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 99/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LVI ++  L +    +      V +  + + V  +     RT   +L + ++++      
Sbjct: 64  LVIAVLASLAYVASRSWKLTLGVIVSFVLIGVFGMWDNTMRTMSIILVSTLVAIGVGIPI 123

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+   + P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 124 GIAMARSDRVQNGVTPMLDVMQTMPAFVYLIPVVMLLG---IGKIPGVIAVVIYAIP--- 177

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 178 --PVIRLTNLGIRLVDKEVLEAATAYGASPMQRLFGVQLPLAMPNIMAGINQTIMMALAM 235

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 236 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 280



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 78/232 (33%), Gaps = 11/232 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S    +             +W+    ++  F    V  +      TM  ++V  ++A  +
Sbjct: 60  SPWWLVIAVLASLAYVASRSWKLTLGVIVSFVLIGVFGMWDNTMRTMSIILVSTLVAIGV 119

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI +     + + + P   ++   PA V+   VV  +        +   + ++   
Sbjct: 120 GIPIGIAMARSDRVQNGVTPMLDVMQTMPAFVYLIPVVMLLGIG----KIPGVIAVVIYA 175

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A+++  +  +    + LP   P  + G       A   
Sbjct: 176 IPPVIRLTNLGIRLVDKEVLEAATAYGASPMQRLFGVQLPLAMPNIMAGINQTIMMALAM 235

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++ +           GLG  + +S     F   +L  L +    +  +R 
Sbjct: 236 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 280


>gi|284028087|ref|YP_003378018.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283807380|gb|ADB29219.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 653

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 87/584 (14%), Positives = 185/584 (31%), Gaps = 44/584 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           + L N++      R  P    ++ ++ V+ +   L        V       +   + +  
Sbjct: 81  VLLQNVIAQPSYGRPVP----VVGWLGVVAVAAFLAWAFGNWKVALLTAAGLTF-IGLQG 135

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q +  T    L+A++++LL        A  S R   V   +LD+MQ++P   +L    
Sbjct: 136 LWQESMDTLSLTLAAVLLALLAGIPLGIWAGLSDRCFKVATLVLDLMQTLPTFVYLAPLT 195

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F             AA  A        +      ++ ++P +  E +RS   +  Q  
Sbjct: 196 LFFAIG--------PAAATIATLVYAAPPVIRLTAHAIRSVPSESVEAARSLGSTRGQTL 247

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S   +V  +  ++      V  + +I         PG+G  +  A++  D+  
Sbjct: 248 TKVLLPMSRSTVVVGINQTIMAALSMVTVAALI-------DAPGLGQTVLKALQTLDVGV 300

Query: 241 ILYAMLTMLGVIFLYDQLLF----RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
              A L ++ +  + D++      RP    S + ++    G+    + V   F +T    
Sbjct: 301 AFNAGLAIVVLAIVLDRVTTAAGDRPWRTASRRRKV--LLGLGAVAALVAVWFSRTYLWA 358

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTL--------GVIRFHFPENFLQLCSNQRVSYMLDIFW 348
               S     S ++     +   +          +R       L             +  
Sbjct: 359 AEFPSEPAIGSRIAVAAADVTTWVQDVFGGFTYGVRDAVTVGVLNPLEALLTESPWWLVT 418

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             VV   A+   W+                V     +T+   ++  ++   + I +G+W 
Sbjct: 419 AVVVALGAVLGGWRGALPAAVCLLLLVGTGVWRDAMVTLASTLLATVVVVAVGIVLGVWT 478

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   ++P        P  V+    ++              +  +  T       V
Sbjct: 479 GRNRRVDQWVRPVLDAGQTMPPFVYLVPFLALFGTSRFTAIAAAVVFAVPVTTKI----V 534

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  A P    E A+S   + W+    + LP                  +  +V  +  
Sbjct: 535 ADGIRAVPVATVEAANSVGSSTWQVISKVQLPVARRAITLAVNQGLIYVLSMVVVGGLVG 594

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            G +           A   +   + + +   L +    + L+R 
Sbjct: 595 AGALGYDVA------AGFAQSELYGKGLAAGLAIVLLGVMLDRI 632


>gi|254247093|ref|ZP_04940414.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124871869|gb|EAY63585.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 341

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 150 SAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 207

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 208 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 265

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 266 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 319

Query: 566 VLALNRFLWHPLYLYGTRC 584
               +  +      +  R 
Sbjct: 320 AWLFDLAM-----RWVERR 333



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 143 LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 202

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 203 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 254

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 255 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 308

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 309 VVMGILIIGAIAWLFDLAMRWVERRVVPWKGR 340


>gi|312198035|ref|YP_004018096.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311229371|gb|ADP82226.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 301

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 79/223 (35%), Gaps = 11/223 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             Y+   +       +     ++  R++       ++ + +G  +     I   + P  +
Sbjct: 90  WHYLFQKYPAVQGKTLWQHALVSAARILAGWAAGVVLGVAMGGVMASVRVIRHLLDPIIE 149

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +    P   F PL +               +L++ G    ++   ++   A P +  + +
Sbjct: 150 ITRPLPPLAFIPLFIVWFGIGET----PKFILILIGVVPVMIIATVSALDAVPKELVQAS 205

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   +       + L    P  +TG   A GGAW + +  E+ +       T+GLG  I
Sbjct: 206 RSLGASPLWALLTVRLRSALPAIITGMRLAMGGAWTSIVAVELIA------ATSGLGYLI 259

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             +      P V+ G+L +    +A +  L   L+ +     R
Sbjct: 260 NNAGVNLQTPLVLSGILAISVLGIAFDGLL-RLLHRFADPTTR 301



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+A  +  R+L+     ++       + A  R +  +L PI++I + +P L F+  
Sbjct: 103 KTLWQHALVSAARILAGWAAGVVLGVAMGGVMASVRVIRHLLDPIIEITRPLPPLAFIPL 162

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F      K I         I    V  M  +   +L  +P++L + SRS   S   
Sbjct: 163 FIVWFGIGETPKFI--------LILIGVVPVMIIATVSALDAVPKELVQASRSLGASPLW 214

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +  ++P ++  M ++M G W  +VA E+I          G+G  I  A      
Sbjct: 215 ALLTVRLRSALPAIITGMRLAMGGAWTSIVAVELIA------ATSGLGYLINNAGVNLQT 268

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  +L +  +   +D LL
Sbjct: 269 PLVLSGILAISVLGIAFDGLL 289


>gi|217976958|ref|YP_002361105.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502334|gb|ACK49743.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 302

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 76/242 (31%), Gaps = 12/242 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRV 390
           +  +   +  +L + W  +     I          +    +Q      +     ++  R 
Sbjct: 51  RRVAGWILPLLLILAWEALSRAGVIHGNVLPAPSAIALAGWQAARSGDLFENMAVSAARA 110

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +I+   I    GI  G             Q++   P     PLV+            
Sbjct: 111 LAGLIVGGTIGFVFGIANGVSELTHRYTDTTLQMIRNVPHLALIPLVILWFGI----DEE 166

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  G  + I  N + G         E+  ++ +T    +  +ILPG  P    G 
Sbjct: 167 AKLFLVALGVFFPIYINTLHGVRTVDPQLIEMGRAYGMTPVTLFLRVILPGALPSIFVGL 226

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  +        +GLG    ++ E      V+L +LI        +
Sbjct: 227 RFALGVMWLTLIVAETIA------AQSGLGHMAMQAREFLQVDVVMLAILIYALLGKLAD 280

Query: 571 RF 572
             
Sbjct: 281 VL 282



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 95/269 (35%), Gaps = 17/269 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
                + RR+   I  LL  +    +    +        P  I            L +  
Sbjct: 44  RRLAGVERRVAGWILPLLLILAWEALSRAGVIHGNVLPAPSAIALAGWQAARSGDLFENM 103

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R L+ +++     FV+      S          L +++++P L  +   +++F  
Sbjct: 104 AVSAARALAGLIVGGTIGFVFGIANGVSELTHRYTDTTLQMIRNVPHLALIPLVILWFGI 163

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A +F +     + +  +    +  +   L E+ R++ ++    F  + +
Sbjct: 164 D--------EEAKLFLVALGVFFPIYINTLHGVRTVDPQLIEMGRAYGMTPVTLFLRVIL 215

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   +  ++   W  ++ +E I          G+G     A +   +  ++ A+
Sbjct: 216 PGALPSIFVGLRFALGVMWLTLIVAETIA------AQSGLGHMAMQAREFLQVDVVMLAI 269

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           L    +  L D   +LL    + W   F+
Sbjct: 270 LIYALLGKLADVLTRLLEGVCLSWHPNFQ 298


>gi|161620534|ref|YP_001594420.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260568230|ref|ZP_05838699.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|161337345|gb|ABX63649.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260154895|gb|EEW89976.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
          Length = 284

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 95  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 153 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 211 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 264

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 265 GLIVNVVI-----GWVERRF 279



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|297618552|ref|YP_003706657.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297618612|ref|YP_003706717.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377529|gb|ADI35684.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
 gi|297377589|gb|ADI35744.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus voltae A3]
          Length = 278

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 19/236 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L FV +I +I   +  ++  TVP  IV ++ I      L + +  T   ++++ +I+L+F
Sbjct: 54  LLFVAIIALIVWKVVNLK--TVPFTIVFLLAII--SMGLWEISMNTLALIITSTLIALIF 109

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 + A+S+++ ++L P+LD MQ++P L +L   V++F     G   G     IFA+
Sbjct: 110 GIPLGIMKARSKKVELLLNPLLDFMQTLPSLAYLIPAVLFFG---TGVAPGVLSTVIFAM 166

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                          +  +   L EV  SF  + WQ    + +P +MP ++  +  ++  
Sbjct: 167 P-----PTIRLTALGIEQVSDQLVEVGESFGATSWQILTKIELPTAMPSILMGINQTILL 221

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +  VV S  I  G       G+G  I   I+   L   L A + +  +  ++D++
Sbjct: 222 SFSMVVISGFIGSG-------GLGDSIISGIQRYSLAPALEAGIAVTFLAVIFDRI 270



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L I    +   +   I W+ +      FT   +L +I +G       T+  ++   +IA
Sbjct: 47  GLLIIPPLLFVAIIALIVWKVVNLKTVPFTIVFLLAIISMGLWEISMNTLALIITSTLIA 106

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I  IP+GI       +   + P    +   P+  +    V           L   +   
Sbjct: 107 LIFGIPLGIMKARSKKVELLLNPLLDFMQTLPSLAYLIPAVLFFGTGVAPGVLSTVIF-- 164

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +     G     +   EV  SF  T W+    I LP   P  + G       +
Sbjct: 165 --AMPPTIRLTALGIEQVSDQLVEVGESFGATSWQILTKIELPTAMPSILMGINQTILLS 222

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++  ++S     G       GLG  I    ++ S    +   + +    +  +R 
Sbjct: 223 FSMVVISGFIGSG-------GLGDSIISGIQRYSLAPALEAGIAVTFLAVIFDRI 270


>gi|51244059|ref|YP_063943.1| glycine betaine/L-proline transport system permease protein (ProW)
           [Desulfotalea psychrophila LSv54]
 gi|50875096|emb|CAG34936.1| probable glycine betaine/L-proline transport system permease
           protein (ProW) [Desulfotalea psychrophila LSv54]
          Length = 280

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 98/233 (42%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI ++ ++   +    +    +  + + + +  L +    T   +LS++V  ++    
Sbjct: 54  IIVIAVVCLIAWRVSGKRLAFGSLLAM-VFIGLLGLWEETMITLAMVLSSVVFCMIAGIP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +S R    L P+LD MQ+ P   +L   V+ F            +A + A    
Sbjct: 113 LGILAGRSNRFNTFLRPVLDAMQTTPAFVYLVPIVMLFSIGN--------VAGVIATIVF 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  +L E + +F  +GWQ  + + +P ++P ++  +  ++     
Sbjct: 165 ALPPLVRLTSLGIRQVHPELVEAALAFGATGWQVLFKVQIPLALPTIMAGINQTIMMALS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I  G       G+G+ + L +   D+       L ++ +  + D++
Sbjct: 225 MVVIAALIGAG-------GLGAPVVLGLNTLDIGGATVGGLGIVLMAIILDRI 270



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 90/257 (35%), Gaps = 16/257 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G   F     +    +       L      +V  V   IAW+  G  +   +   ++++ 
Sbjct: 25  GYRWFFQAIKWPIEQTLSGAENGLLALPPIIVIAVVCLIAWRVSGKRLAFGSLLAMVFIG 84

Query: 381 WLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            LG      IT+  V+  ++   I  IP+GI  G     ++ ++P    +   PA V+  
Sbjct: 85  LLGLWEETMITLAMVLSSVVFCMIAGIPLGILAGRSNRFNTFLRPVLDAMQTTPAFVYLV 144

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            +V   S  ++   +   +         ++     G      +  E A +F  TGW+   
Sbjct: 145 PIVMLFSIGNVAGVIATIVF----ALPPLVRLTSLGIRQVHPELVEAALAFGATGWQVLF 200

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + +P   P  + G       A +  +++ +   G       GLGA +            
Sbjct: 201 KVQIPLALPTIMAGINQTIMMALSMVVIAALIGAG-------GLGAPVVLGLNTLDIGGA 253

Query: 556 VLGVLIMCCFVLALNRF 572
            +G L +    + L+R 
Sbjct: 254 TVGGLGIVLMAIILDRI 270


>gi|182419256|ref|ZP_02950509.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237667484|ref|ZP_04527468.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376896|gb|EDT74467.1| taurine transport system permease protein TauC [Clostridium
           butyricum 5521]
 gi|237655832|gb|EEP53388.1| taurine transport system permease protein TauC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 261

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 82/196 (41%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     +M R+ +    A++I +P G+  G+   I +  +P  +     P   ++ L+
Sbjct: 62  SLLQHLGASMERLFISFFFAALIAVPFGLASGYNSKIRAIFEPIIEFYRPLPPLAYYTLL 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +       N     L+       I  + ++       D+   A +   + ++ + ++
Sbjct: 122 VLWLGIG----NESKITLLFLACFAPIYISCVSAVLKIKEDYINSAYTVGASKYQIFIHV 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   P    G  TA G A+   + +E+ +        +GLG  + +++       + +
Sbjct: 178 ILPSCLPDIFVGIRTAVGVAYTTLVAAEMVA------AKSGLGWMVLDASNYLRSDIIFV 231

Query: 558 GVLIMCCFVLALNRFL 573
           G++IM    + L++FL
Sbjct: 232 GIIIMGITGILLDQFL 247



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 95/256 (37%), Gaps = 22/256 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDI-----VDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++  +LV  ++        +            +DI+      +SL Q+   +  R+  + 
Sbjct: 19  IILILLVWFVVTNFGIANSKMVPTPQAVWNAFIDIIQNGYKNYSLLQHLGASMERLFISF 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             + L    +   +  + ++  +  PI++  + +P L + T  V++       K      
Sbjct: 79  FFAALIAVPFGLASGYNSKIRAIFEPIIEFYRPLPPLAYYTLLVLWLGIGNESK------ 132

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I  +F +    +  S   ++  I  D    + +   S +Q F ++ +P  +P +   +
Sbjct: 133 --ITLLFLACFAPIYISCVSAVLKIKEDYINSAYTVGASKYQIFIHVILPSCLPDIFVGI 190

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   +  +VA+EM+          G+G  +  A        I   ++ M     L D
Sbjct: 191 RTAVGVAYTTLVAAEMVAAKS------GLGWMVLDASNYLRSDIIFVGIIIMGITGILLD 244

Query: 257 QL---LFRPMIVWSNK 269
           Q    L + ++ W  K
Sbjct: 245 QFLRILEKKIVPWKGK 260


>gi|254455769|ref|ZP_05069198.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082771|gb|EDZ60197.1| glycine betaine/L-proline transport system permease protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 500

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   + +A ++S+          A+ +R   ++ PI+D MQ++P   F+   + +F 
Sbjct: 315 AMTTLALLGTAAILSIAIGIPLGIFCARRQRFYSMIRPIMDFMQTMPAFVFMIPVIAFFG 374

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++AA+          +       L  +P  + E + ++  + W     + 
Sbjct: 375 TG--------KVAAVIITMIFGGTPVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVD 426

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  ++      VV + +I          G+G  +  A++  ++   + A
Sbjct: 427 LPLATPSILAGVNQTVMLSLAMVVVASLI-------GAKGLGQDVLEALQYANVGQGILA 479

Query: 245 MLTMLGVIFLYDQLL 259
            + +L V  + D+++
Sbjct: 480 GVAILFVALILDRVV 494



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V     +    +V    +    ++  Y      Y   L        T+  +    I++  
Sbjct: 272 VKTPWIVIITAIVTLTGLSAGPRAAIYSAGFLCYMGFLGFWVKAMTTLALLGTAAILSIA 331

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI+   R    S I+P    +   PA VF    +  ++++       + + MIFG
Sbjct: 332 IGIPLGIFCARRQRFYSMIRPIMDFMQTMPAFVFM---IPVIAFFGTGKVAAVIITMIFG 388

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A ++  T W   R + LP   P  + G       +  
Sbjct: 389 GT-PVVRLTVLGLRGVPETIREAAIAYGATKWYLLRKVDLPLATPSILAGVNQTVMLSLA 447

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L  + +    L L+R +
Sbjct: 448 MVVVASLIG-------AKGLGQDVLEALQYANVGQGILAGVAILFVALILDRVV 494


>gi|119387848|ref|YP_918882.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378423|gb|ABL73186.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 280

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 17/234 (7%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-------VIWL 382
                 +   +S    +  F V+  VA  + W S   +         L+       ++  
Sbjct: 25  RRGAAVARHGLSRYGLLAGFLVLWQVASTMGWVSPAVLPPLDKIAAALWNGIASGALVDD 84

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I++ R  +    A ++ IP+G+ +G  P +   + P  QL     A   +P+ +  + 
Sbjct: 85  IAISLQRSGIAFAGAVVLGIPLGLLMGQIPAVERALDPILQLFRQTSALALYPVFILLLG 144

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +       ++ + T + +L   I G         E+A ++  +    +R +ILP  
Sbjct: 145 LGETSK----VFVIFWATLFPVLLATIGGVKEVDGKLIEMARTYGASRLAVFRRVILPAS 200

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            P    G   +   A    I +E+           GLG  +  +      P + 
Sbjct: 201 VPSIFVGLRLSATTALLLLIAAEMIG------ANKGLGFQVMNAQYNFQIPLMF 248



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQY 64
                ++R        L  F+++  + + +         P D +       +   +L   
Sbjct: 25  RRGAAVARHGLSRYGLLAGFLVLWQVASTMGWVSPAVLPPLDKIAAALWNGIASGALVDD 84

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R   A   +++       L  +   +   L PIL + +    L      ++   
Sbjct: 85  IAISLQRSGIAFAGAVVLGIPLGLLMGQIPAVERALDPILQLFRQTSALALYPVFILLLG 144

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E + +F IF + ++ +  +    +  +   L E++R++  S    F  + 
Sbjct: 145 LG--------ETSKVFVIFWATLFPVLLATIGGVKEVDGKLIEMARTYGASRLAVFRRVI 196

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P S+P +   + +S +     ++A+EMI          G+G  +  A     +  + 
Sbjct: 197 LPASVPSIFVGLRLSATTALLLLIAAEMIGANK------GLGFQVMNAQYNFQIPLMF 248


>gi|226362541|ref|YP_002780319.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226241026|dbj|BAH51374.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 276

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 24/252 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG---------YIVNHF 371
              R    +          +    + +W  +   V I + W+ +G         +     
Sbjct: 4   TATRSERSQKDPTPTRQPSIWRRYERYWLPIGTVVIILVVWEILGKMGLWNPLFFSSPSE 63

Query: 372 TYQDVLYVIWLGCITMFRV-----VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
            +     +      +  RV      + + IA  + +P+G+ +G    ++    P    L 
Sbjct: 64  IWGGFTSLTEGPLWSDLRVSGTEFAIGMAIALGLGVPIGLLLGSNRRLNHAFDPIINALY 123

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P  V  PL+V        +    +++L IF     ++ N+I G           A SF
Sbjct: 124 STPILVLTPLLVIWFGLGMGSKIANVAILAIF----PVIINMIEGVRTVDPVLLRAARSF 179

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +G   ++ +  P + P+++TG   A G    A +V E  +       T G+G  I   
Sbjct: 180 GASGLSIYKDVTFPSVIPFFITGVRLAIGKGMIAVVVGEYIA------ATEGIGYRIRAD 233

Query: 547 TEKGSFPEVVLG 558
            E  +    +  
Sbjct: 234 AEVFNTSRYLAA 245



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 81/223 (36%), Gaps = 19/223 (8%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM-----LSAMVISLL 81
           +VI ++   + G      P        I     SL +    + LR+        M I+L 
Sbjct: 37  VVIILVVWEILGKMGLWNPLFFSSPSEIWGGFTSLTEGPLWSDLRVSGTEFAIGMAIALG 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   +RRL     PI++ + S PIL      V++F      K+    + AIF 
Sbjct: 97  LGVPIGLLLGSNRRLNHAFDPIINALYSTPILVLTPLLVIWFGLGMGSKIANVAILAIFP 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          +M + +  +   L   +RSF  SG   +  +  P  +P  +  + +++ 
Sbjct: 157 VI--------INMIEGVRTVDPVLLRAARSFGASGLSIYKDVTFPSVIPFFITGVRLAIG 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            G   VV  E I   +      GIG  I    +  +    L A
Sbjct: 209 KGMIAVVVGEYIAATE------GIGYRIRADAEVFNTSRYLAA 245


>gi|225388178|ref|ZP_03757902.1| hypothetical protein CLOSTASPAR_01913 [Clostridium asparagiforme
           DSM 15981]
 gi|225045765|gb|EEG56011.1| hypothetical protein CLOSTASPAR_01913 [Clostridium asparagiforme
           DSM 15981]
          Length = 256

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 90/250 (36%), Gaps = 18/250 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTYQDVLYVIWLG 383
           + + ++ +      +L + W+ V               + +          ++   +W  
Sbjct: 3   DRWKKIAAPALGIAVLLVLWYAVCRAGIFSAYVLPPPAKVLNSFFRMLKTGELWQDVW-- 60

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+  RV+    IA ++   +G+     P      +   Q     P     PL++     
Sbjct: 61  -ISFLRVMKGFSIAFVLAFLLGMVRALLPSAEGYYEYVVQFFRNVPPLSMIPLLILWCGI 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    +++++  + + +  N++ G +       EV   F  +  R +  I+LP   
Sbjct: 120 GETTK----TVIIVLASFFPMYLNIVKGFTGCDRKLLEVGDMFGYSRTRKFIRIVLPYAA 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              + G     G +W A I +E+ +       +TGLG  I  + +     +V++G+L++ 
Sbjct: 176 ADILVGMRIGLGYSWRAIIGAEMVA------ASTGLGHMILFAQQMSRTDKVIVGILVIG 229

Query: 564 CFVLALNRFL 573
                 +R  
Sbjct: 230 AVGYGTDRVF 239



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 91/248 (36%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           ++I      +   +++   +    +        P  +++     L    L Q    + LR
Sbjct: 6   KKIAAPALGIAVLLVLWYAVCRAGIFSAYVLPPPAKVLNSFFRMLKTGELWQDVWISFLR 65

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++    I+ +  F+   + A           ++   +++P L  +   +++       K 
Sbjct: 66  VMKGFSIAFVLAFLLGMVRALLPSAEGYYEYVVQFFRNVPPLSMIPLLILWCGIGETTKT 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   LA+ F         M  ++ +      R L EV   F  S  +KF  + +P++   
Sbjct: 126 VIIVLASFF--------PMYLNIVKGFTGCDRKLLEVGDMFGYSRTRKFIRIVLPYAAAD 177

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M + +   W  ++ +EM+          G+G  I  A +      ++  +L +  V
Sbjct: 178 ILVGMRIGLGYSWRAIIGAEMVAAST------GLGHMILFAQQMSRTDKVIVGILVIGAV 231

Query: 252 IFLYDQLL 259
            +  D++ 
Sbjct: 232 GYGTDRVF 239


>gi|182434874|ref|YP_001822593.1| putative glycine betaine ABC transporer permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326775392|ref|ZP_08234657.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178463390|dbj|BAG17910.1| putative glycine betaine ABC transporer permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326655725|gb|EGE40571.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 661

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 81/526 (15%), Positives = 161/526 (30%), Gaps = 47/526 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A    R+  VL P+LD MQ +P   +L   V+ F 
Sbjct: 151 TMQTLALMVVAVLASVVLGLLLGLAAGLFDRVFRVLRPVLDTMQVLPAFAYLLPVVLVFG 210

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PG        A+ A        M       L      + E   S   +G Q+     
Sbjct: 211 IGVPG--------AVLATVVYAAPPMARLTALGLRGADGGVMEAVTSLGATGRQRLLSAR 262

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 263 LPLARKELLLGLNQTIMMALSMAVIASVIGAG-------GLGDRVYQALSSVDVGAALAA 315

Query: 245 MLTMLGVIFLYDQ----------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
            + ++ +  + D+                 L R    WS    +          +     
Sbjct: 316 GIPIVLLAVVLDRTTEAAGRRIGAEPTGPALLRGWRGWSLAALVTAAVTAVGRAADGQVW 375

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
               +    I          + +++      +G            + +  R       +W
Sbjct: 376 P--DDLTVAIAGPVNTAKDWMVDHLYTGVPVVGGTADLAAHFTSGVLNPLRSGLTGLPWW 433

Query: 349 FCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
             ++   A+      W++    V       VL V      T+ +V+  + +  +I   V 
Sbjct: 434 SVLLIVAALAWTIGTWRTAATAVLAMAAIGVLGVWEPSMDTLSQVLAAVAVTLVIGFGVA 493

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +       +   ++P   +    P  V+   VV+              +  +      ++
Sbjct: 494 VGAARSARLERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVIYALPA----VI 549

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G  +      E A S   T  +  R + +P   P  +     A        I+  
Sbjct: 550 RITTQGLRSVDPAAMEGARSLGATPGQQLRQVQIPLARPSLLLAVNQAVVLVLAVVIIGG 609

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +   G        LG  +     +G     ++    + C  L L+R
Sbjct: 610 LVGSGA-------LGYEVVLGLAQGDLATGLVAGAAIVCLGLMLDR 648



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I   L     T        +    + V  + + +  T  ++L+A+ ++L+  F  A  A
Sbjct: 437 LIVAALAWTIGTWRTAATAVLAMAAIGVLGVWEPSMDTLSQVLAAVAVTLVIGFGVAVGA 496

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S RL  +L P+LD+ Q++P   +L   V  F          A + A+ A+        
Sbjct: 497 ARSARLERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVIYALPAVIRI----- 551

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                Q L ++     E +RS   +  Q+   + +P + P L+  +  ++      V+  
Sbjct: 552 ---TTQGLRSVDPAAMEGARSLGATPGQQLRQVQIPLARPSLLLAVNQAVVLVLAVVIIG 608

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            ++  G        +G  + L + + DL   L A   ++ +  + D++
Sbjct: 609 GLVGSGA-------LGYEVVLGLAQGDLATGLVAGAAIVCLGLMLDRV 649


>gi|163737565|ref|ZP_02144982.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389091|gb|EDQ13443.1| glycine betaine transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 342

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 98/233 (42%), Gaps = 17/233 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFV 85
             ++ +L+      +  R +   V +++ + +L  +   A +T   +     IS+LF   
Sbjct: 109 FIMVPLLVAISWYASRSRPVTIFVAVSIMLLALVDHYDVAMQTLSIIFVCTTISVLFGVP 168

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                +KS RL   +VP+LD++Q++P   +L   +  F                 AI   
Sbjct: 169 IGIAMSKSDRLQKSVVPLLDLLQTLPTFVYLIPLIFLFSVTESKLYG-------IAIILY 221

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + +D+ E + +F ++  QK   + +P ++P ++  +  ++     
Sbjct: 222 AIVPVIRLTDLGIRLVDQDVIEAANAFGMNDRQKLMRVQLPLALPNIMAGINQTIMMSLA 281

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++         PG+G  +   I+  +L   + A + ++ +  + D++
Sbjct: 282 MVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDRV 327



 Score = 71.1 bits (173), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 81/236 (34%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIG------YIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           ++ +   + ++  + + I+W +        ++        ++    +   T+  + V   
Sbjct: 101 WLFEAMPWFIMVPLLVAISWYASRSRPVTIFVAVSIMLLALVDHYDVAMQTLSIIFVCTT 160

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ +  +P+GI +     +   + P   LL   P  V+    +  +  + +  +    + 
Sbjct: 161 ISVLFGVPIGIAMSKSDRLQKSVVPLLDLLQTLPTFVYL---IPLIFLFSVTESKLYGIA 217

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I      ++     G      D  E A++F +   +    + LP   P  + G      
Sbjct: 218 IILYAIVPVIRLTDLGIRLVDQDVIEAANAFGMNDRQKLMRVQLPLALPNIMAGINQTIM 277

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +    +++ + S         GLG  +            ++  + +    + L+R
Sbjct: 278 MSLAMVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDR 326


>gi|313123818|ref|YP_004034077.1| ABC proline/glycine betaine transporter, permease and substrate
           binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280381|gb|ADQ61100.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 506

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I  I+     + Q      L  + A+++S L       L A S+R G V+  I  I+Q+I
Sbjct: 5   INTISSHQGQIWQALGEHLLLSMEALLLSCLIAIPLGMLLAHSKRAGEVVFQIASIIQTI 64

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   + +               A+ A+    +  +  + Y +L NI  +LEE + 
Sbjct: 65  PSLALLGLLIPFVGIG--------TTPALIALTAYGIMPIYQNTYSALRNIDPNLEEAAD 116

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +F LS W+K   L  P ++P ++  + +S+         + MI  G       G+G+YI 
Sbjct: 117 AFGLSRWKKLSRLEFPMALPIILSGVSISLVMIIGTATLAAMIGAG-------GLGTYIM 169

Query: 231 LAIKEQD-----LLAILYAMLTMLGVIFL 254
           + I++ +     + A L A+LT+     L
Sbjct: 170 IGIQQNNNTYLLIGAGLSAVLTLAMSGLL 198



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 66/177 (37%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I IP+G+ +         +   A ++   P+     L++  V        + L+   
Sbjct: 33  SCLIAIPLGMLLAHSKRAGEVVFQIASIIQTIPSLALLGLLIPFVGIGTTPALIALTAYG 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      I  N  +       + +E A +F ++ W+    +  P   P  ++G   +   
Sbjct: 93  IM----PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALPIILSGVSISLVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG YI    ++ +   +++G  +     LA++  L
Sbjct: 149 IIGTATLAAMIGAG-------GLGTYIMIGIQQNNNTYLLIGAGLSAVLTLAMSGLL 198


>gi|295397453|ref|ZP_06807539.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
 gi|294974306|gb|EFG50047.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
          Length = 249

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 100/251 (39%), Gaps = 19/251 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
            IF  + F +++     +   ++         P  +       +   +L      +  R+
Sbjct: 3   PIFKRILFFVILIGFWSIGSALEWWSEIIFPSPPSVWQSFISGIADKTLIYGLVASFRRL 62

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              +  SLL       L AKS+     +  +L  +QS+P + +L   +++F         
Sbjct: 63  AIGLSASLLLGTSIGILIAKSKTADDTIGSMLLALQSVPSIVWLPLAIMWFGLN------ 116

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A IF +     + M  ++   + N+P    + +R+    G   F  +  P S+P +
Sbjct: 117 --EKAVIFIVILGGTFVMALNIRTGIKNVPPLYIKAARTMGSGGIDLFRRVIFPASIPHV 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V    ++ +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ +  + 
Sbjct: 175 VTGSRLAWAFAWRSLMAGELLSTG------PGLGYTLRYASDFGDMSLVICVMIIIGVIG 228

Query: 253 FLYDQLLFRPM 263
            + DQ +F+ +
Sbjct: 229 AIVDQFIFQRI 239



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 16/251 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY------VIWLGCITMFRVVVLIII 396
           +  +         +    W  I +      +Q  +       +I+    +  R+ + +  
Sbjct: 9   LFFVILIGFWSIGSALEWWSEIIFPSPPSVWQSFISGIADKTLIYGLVASFRRLAIGLSA 68

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + ++   +GI I         I      L + P+ V+ PL +             +  ++
Sbjct: 69  SLLLGTSIGILIAKSKTADDTIGSMLLALQSVPSIVWLPLAIMWFGL----NEKAVIFIV 124

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I G  + +  N+  G    P  + + A +    G   +R +I P   P+ VTG+  A   
Sbjct: 125 ILGGTFVMALNIRTGIKNVPPLYIKAARTMGSGGIDLFRRVIFPASIPHVVTGSRLAWAF 184

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           AW + +  E+ S G       GLG  +  +++ G    V+  ++I+      +++F++  
Sbjct: 185 AWRSLMAGELLSTG------PGLGYTLRYASDFGDMSLVICVMIIIGVIGAIVDQFIFQR 238

Query: 577 LYLYGTRCLRL 587
           +     +   L
Sbjct: 239 IEKNVAKRWGL 249


>gi|300117754|ref|ZP_07055525.1| alkanesulfonates transport system permease [Bacillus cereus SJ1]
 gi|298724854|gb|EFI65525.1| alkanesulfonates transport system permease [Bacillus cereus SJ1]
          Length = 282

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       L    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLIVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGET 280



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V               LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 IVLWF--GFG--ETSKVLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPAALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|255030327|ref|ZP_05302278.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes
           LO28]
          Length = 236

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  ++T   +L++ +I+L+         AKS  +  +  P+LD MQ++P   +L   V 
Sbjct: 44  WRDMTQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVA 103

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+               +  +  +L E + SF  + WQK W
Sbjct: 104 FFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLW 155

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  S+      VV + MI          G+G+ +  A+   D    
Sbjct: 156 KVQLPMAKSTMMAGINQSIMLALSMVVIASMI-------GAMGLGTRVYFAVGRNDAGGG 208

Query: 242 LYAMLTMLGVIFLYDQL 258
             A + ++ V  + D+L
Sbjct: 209 FVAGIAIVIVAIILDRL 225



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 11/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +  F        G  W  I + V        L        T+  V+   +IA +I +
Sbjct: 7   FIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGV 66

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GIW+     + S  +P    +   PA V+    V+      +   +   +        
Sbjct: 67  PLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMP 122

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +     G      +  E A SF  T W+    + LP      + G   +   A +  +
Sbjct: 123 PTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVV 182

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++ +           GLG  +  +  +       +  + +    + L+R 
Sbjct: 183 IASMIG-------AMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRL 225


>gi|41407907|ref|NP_960743.1| hypothetical protein MAP1809c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396261|gb|AAS04126.1| hypothetical protein MAP_1809c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 275

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 86/258 (33%), Gaps = 14/258 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCI 385
           +     ++        +L ++      GV       +   I+           +     I
Sbjct: 26  WARRKWEVVRLVSPLALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHI 85

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RVV  + +  +I I  G  +G    + + + P  Q++ A P     PL +       
Sbjct: 86  STVRVVEGLALGGVIGIVAGAAVGLSRWVEATVDPPLQMIRALPHLGLIPLFILWFGIGE 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+  G  + +  N  +          E A     + ++ +R I++PG  P 
Sbjct: 146 L----PKVLLVALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFSFFQRFRRILVPGTAPQ 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   AW   IV+E  +         G+G  I  + +      ++ G+ I    
Sbjct: 202 VLVGLRQSLAIAWLTLIVAEQINADK------GIGFLINNARDFLRIDIIIFGLTIYALL 255

Query: 566 VLALN---RFLWHPLYLY 580
            +  +   R +      Y
Sbjct: 256 GIITDAVVRLIERRAVRY 273



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 103/250 (41%), Gaps = 16/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVISLL 81
           LA + +  + + +    Q+      ++    + L  +     A   +T+R++  + +  +
Sbjct: 40  LALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHISTVRVVEGLALGGV 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V       SR +   + P L +++++P LG +   +++F           EL  +  
Sbjct: 100 IGIVAGAAVGLSRWVEATVDPPLQMIRALPHLGLIPLFILWFGIG--------ELPKVLL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    V+ +  + + ++  +   + E ++    S +Q+F  + VP + P ++  +  S++
Sbjct: 152 VALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFSFFQRFRRILVPGTAPQVLVGLRQSLA 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ +E I          GIG  I  A     +  I++ +     +  + D ++ R
Sbjct: 212 IAWLTLIVAEQI------NADKGIGFLINNARDFLRIDIIIFGLTIYALLGIITDAVV-R 264

Query: 262 PMIVWSNKFR 271
            +   + ++R
Sbjct: 265 LIERRAVRYR 274


>gi|153010913|ref|YP_001372127.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151562801|gb|ABS16298.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 273

 Score =  111 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+VV   +   + + +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 84  SLRRLVVGASLGIAVGVSLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 141

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF +  W   R IILPG FP 
Sbjct: 142 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLVRMGQSFGLGWWSIVRKIILPGAFPA 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 200 ILSGLRVSISIAIILLVAAEMLG------AQFGVGSYILEAGSLYDLEKLFAGVTILSVM 253

Query: 566 VLALN 570
            L +N
Sbjct: 254 GLIVN 258



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 84/220 (38%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 58  LPRPSAVLETFVQLWQTGLLWQHLLPSLRRLVVGASLGIAVGVSLGVMIGLFSYVRAGLV 117

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 118 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF L  W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 170 DRSLVRMGQSFGLGWWSIVRKIILPGAFPAILSGLRVSISIAIILLVAAEMLG------A 223

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+GSYI  A    DL  +   +  +  +  + + ++ +
Sbjct: 224 QFGVGSYILEAGSLYDLEKLFAGVTILSVMGLIVNFIIGQ 263


>gi|157377368|ref|YP_001475968.1| putative permease [Shewanella sediminis HAW-EB3]
 gi|157319742|gb|ABV38840.1| putative permease [Shewanella sediminis HAW-EB3]
          Length = 299

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 98/234 (41%), Gaps = 16/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            + +++ I  ++    +   +   +V    + +    + +   RT   +    +++++  
Sbjct: 63  WWAVLLSITALVYLASRSWKLSLGVVVSFLL-IGYFGMWEDTMRTLSIITVCTLLAIVLG 121

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L A+S R   ++ PILD+MQ++P   +L   V+       GKV G     I+AI 
Sbjct: 122 VPIGILMARSNRTQSLVTPILDVMQTMPAFVYLIPVVMLLG---IGKVPGVIAVVIYAIP 178

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +       +  + +++ E + ++  +  Q+   + +P + P ++  +  ++   
Sbjct: 179 -----PVIRLTNLGIRLVDKEVLEAATAYGANPMQRLMGVQLPLASPTIMAGINQTIMMA 233

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV + MI V        G+G  +  +I  Q     L+  L ++ +  ++D+
Sbjct: 234 LGMVVIASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 74/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S    +             +W+    +V  F       +      T+  + V  ++A ++
Sbjct: 61  SPWWAVLLSITALVYLASRSWKLSLGVVVSFLLIGYFGMWEDTMRTLSIITVCTLLAIVL 120

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +       S + P   ++   PA V+   VV  +        +   + ++   
Sbjct: 121 GVPIGILMARSNRTQSLVTPILDVMQTMPAFVYLIPVVMLLGIG----KVPGVIAVVIYA 176

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A+++     +    + LP   P  + G       A   
Sbjct: 177 IPPVIRLTNLGIRLVDKEVLEAATAYGANPMQRLMGVQLPLASPTIMAGINQTIMMALGM 236

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG  + +S     F   +   L +    +  +R
Sbjct: 237 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280


>gi|171316855|ref|ZP_02906065.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MEX-5]
 gi|171098025|gb|EDT42842.1| choline ABC transporter, permease protein [Burkholderia ambifaria
           MEX-5]
          Length = 298

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGVWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L      ++  + IG+    +G+    FT   +L +   G      IT+   +   
Sbjct: 40  VEHGLQAIPMWLMMAIFIGVGLWRVGWRFALFTTASLLLIFATGFWDQTVITLGLTLSST 99

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ IP+G+W      +++ ++P   L+   PA V+            +   L   +
Sbjct: 100 IISLVLGIPLGVWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVI 159

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +             G      +  E   +F  T W+    +  P   P  + G     
Sbjct: 160 FAMPPAVRL----TSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTI 215

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 216 MMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|313498505|gb|ADR59871.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 282

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +L +  + +L       L A       +L+P+LD+MQ++P   +L   
Sbjct: 90  GLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAFVYLIPV 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ A+FA     +  +       L  I   L + +     S WQ+
Sbjct: 150 LMLFGLG--------KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQR 201

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  S+      VV + MI          G+G  +   I+  ++ 
Sbjct: 202 LRRIALPLALPSIMAGLNQSVMMALSMVVVASMI-------GARGLGEDVLAGIQTLNVG 254

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  + D++
Sbjct: 255 QGMEAGLAIVALAMVIDRI 273



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 11/208 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +V       +L +      T+  V+V   +  ++ +P+GI +  RP     + P   +
Sbjct: 77  AVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDV 136

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA V+   V+           +      +      ++     G S       + A 
Sbjct: 137 MQTLPAFVYLIPVLMLFGLG----KVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAH 192

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               + W+  R I LP   P  + G   +   A +  +V+ +           GLG  + 
Sbjct: 193 GLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIG-------ARGLGEDVL 245

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +  +  + +   L +    + ++R 
Sbjct: 246 AGIQTLNVGQGMEAGLAIVALAMVIDRI 273


>gi|269792013|ref|YP_003316917.1| binding-protein-dependent transport systems inner membrane
           component [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099648|gb|ACZ18635.1| binding-protein-dependent transport systems inner membrane
           component [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 278

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 87/253 (34%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-AIGIAWQSIGYIVNHFTYQDVLYVI 380
             R       L          +L ++W     G+    I                   + 
Sbjct: 18  PRRATSGSPVLWGPGAVIAGALLALWWIGSRMGLWTSYILPSPSAVGAAFLDLVYSGRLR 77

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R+ +   ++S + +P GI +G RP +   I P  + +   P     PL++  
Sbjct: 78  EHLLSSLTRIGMGFTMSSAVALPAGILMGLRPRLRRAISPLLEFMRHVPPLALLPLLILW 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +       ++   + +    N + G         EV  +F ++       I+LP
Sbjct: 138 FGIGEGSK----LAVIALASFFPAFINAMEGVMGCDRSLVEVGHAFGLSEREIIGRIVLP 193

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY + G   A G +W + I +E+ +       ++GLG  I ++         ++G+ 
Sbjct: 194 YSLPYVLAGLRLALGYSWRSLIGAELLA------ASSGLGYMIQDAQAMSRPDVALVGIF 247

Query: 561 IMCCFVLALNRFL 573
           ++    +A +   
Sbjct: 248 VIGLVGIASDGLF 260



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               L      + L        P  +       +    L ++   +  R+     +S   
Sbjct: 38  ALLALWWIGSRMGLWTSYILPSPSAVGAAFLDLVYSGRLREHLLSSLTRIGMGFTMSSAV 97

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L     RL   + P+L+ M+ +P L  L   +++F      K+    LA+ F  
Sbjct: 98  ALPAGILMGLRPRLRRAISPLLEFMRHVPPLALLPLLILWFGIGEGSKLAVIALASFFPA 157

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F         +  + +    R L EV  +F LS  +    + +P+S+P ++  + +++  
Sbjct: 158 F--------INAMEGVMGCDRSLVEVGHAFGLSEREIIGRIVLPYSLPYVLAGLRLALGY 209

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W  ++ +E++          G+G  I  A         L  +  +  V    D L 
Sbjct: 210 SWRSLIGAELLAASS------GLGYMIQDAQAMSRPDVALVGIFVIGLVGIASDGLF 260


>gi|254384329|ref|ZP_04999672.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. Mg1]
 gi|194343217|gb|EDX24183.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. Mg1]
          Length = 657

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 76/440 (17%), Positives = 150/440 (34%), Gaps = 34/440 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A+  S+L   +    A  S R+  VL P+LD MQ +P   +L   V+ F 
Sbjct: 149 TMQTLALMVVAVAASVLLGGLLGLAAGLSDRMHRVLWPVLDTMQVLPAFAYLLPVVLVFG 208

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L +    + E + S   +G Q+     
Sbjct: 209 IGVP--------AAVLATVIYAAPPMARLTALGLRDADAGVMEAATSLGATGRQRLLTAR 260

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  S+       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 261 LPLARKELLLGVNQSIMMALGMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 313

Query: 245 MLTMLGVIFLYDQL----LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
            + ++ +  + D++      R     +++ RL          +  L   R  + L +   
Sbjct: 314 GVPIVLLAIVLDRVTAAAGERIGAAPAHRSRLGWAIAAAATAAVALGT-RLADALTWPDG 372

Query: 301 SSWNFFSPLSNNVKKLCRTLGV------IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
            + +   P++  V  +   L            +  +F     N   S +  + W+ V+  
Sbjct: 373 WTLDIAEPVNRAVDWMTAHLYSGVPVVGGTADWAGHFTTWVLNPLRSGLQWLPWWAVLLT 432

Query: 355 VAIGIA----WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           + +       W++    V       VL V      T+ +V+  + +  ++ + +G+    
Sbjct: 433 IGVLALLIGTWRTAVTAVLAMAAIGVLGVWDPALDTLSQVLAAVAVTLLVGVALGVASAR 492

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   ++P   +    P  V+   VV+              +  +             
Sbjct: 493 SNRLGRALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI----TAQ 548

Query: 471 GASAFPNDFKEVASSFHITG 490
           G  A      E + S   TG
Sbjct: 549 GVRAVNPAAMESSRSLGATG 568



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 12/155 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             A +L IG++ +L+   +          +    + V  +   A  T  ++L+A+ ++LL
Sbjct: 426 WWAVLLTIGVLALLIGTWRTAVTAV----LAMAAIGVLGVWDPALDTLSQVLAAVAVTLL 481

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   +A+S RLG  L P+LD+ Q++P   +L   V  F       V  A + A+ A
Sbjct: 482 VGVALGVASARSNRLGRALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPA 541

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +             Q +  +     E SRS   +G
Sbjct: 542 VVRI--------TAQGVRAVNPAAMESSRSLGATG 568



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 95/358 (26%), Gaps = 40/358 (11%)

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
             G       G G   AL      L+    A+  +LG +FL           W     ++
Sbjct: 9   TTGSAAATDTGSGVLRALTRHRGRLIVACAAVALVLGAVFL-------GAGNWPASLSVD 61

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
            +  +     W++          +      N        V  +   LG          + 
Sbjct: 62  LSGPLKSTSDWIIDNRDGHPLFLYFLGHVSNAVVVSVRAVYLVLLALGWAGVTAAATLVA 121

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
                    +  +  F V   + + +                          T+  +VV 
Sbjct: 122 WRVAGVRLALTSLAAFAVCGVLGMWVP----------------------TMQTLALMVVA 159

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  + ++   +G+  G    +   + P    +   PA  +   VV               
Sbjct: 160 VAASVLLGGLLGLAAGLSDRMHRVLWPVLDTMQVLPAFAYLLPVVLVFGIG----VPAAV 215

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L  +      +      G         E A+S   TG +      LP      + G   +
Sbjct: 216 LATVIYAAPPMARLTALGLRDADAGVMEAATSLGATGRQRLLTARLPLARKELLLGVNQS 275

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              A   ++++ V   G       GLG  + ++         +   + +    + L+R
Sbjct: 276 IMMALGMAVIASVIGAG-------GLGDRVYQALASVDVGAALAAGVPIVLLAIVLDR 326


>gi|297155273|gb|ADI04985.1| putative taurine transport system permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 301

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 94/278 (33%), Gaps = 26/278 (9%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
           ++R   P     + +++R   +       V   + +     +  + ++   Y     +  
Sbjct: 27  LVRRPGPRERDPVRAHRRRLAVEISLAVAVPTALILLWQLAAYRHWIDPRVYPAPSTIAA 86

Query: 382 LGC-------------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            G               T+ RV+    + +     VG+ +G    + + ++P    L   
Sbjct: 87  DGWQRAADGKLWPDVWATLQRVIAGYAVGTAAGYAVGLLMGAVRIVRAALEPLLDALYVV 146

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P+ ++               L+     +++  + +A        ++E    F  
Sbjct: 147 PKLALLPVFLNMFGLGEGPQ----IALVATTVFFFVWISTMAAVMGVAEGYREAGQVFGA 202

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W+ +R+++LP   P  + G   A G A    + SE  +         GLG  I +S  
Sbjct: 203 GPWQMFRHVLLPASLPQVLVGMRVAAGVAVLVIVASEQIA------ADNGLGHLIFDSRA 256

Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
                 + +G++ +    +  +   RF+   L  +  R
Sbjct: 257 LFQNDVMFVGIVCVAVLGVVFSELVRFVGRRLTPWAPR 294



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 23/271 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61
           P    RR       L   V    I+   L   +    PR       I  D         L
Sbjct: 38  PVRAHRRRLAVEISLAVAVPTALILLWQLAAYRHWIDPRVYPAPSTIAADGWQRAADGKL 97

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T  R+++   +     +    L    R +   L P+LD +  +P L  L   + 
Sbjct: 98  WPDVWATLQRVIAGYAVGTAAGYAVGLLMGAVRIVRAALEPLLDALYVVPKLALLPVFLN 157

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F      +        I  + T+  + +  S   ++  +     E  + F    WQ F 
Sbjct: 158 MFGLGEGPQ--------IALVATTVFFFVWISTMAAVMGVAEGYREAGQVFGAGPWQMFR 209

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P S+P ++  M ++       +VASE I   +      G+G  I  +        +
Sbjct: 210 HVLLPASLPQVLVGMRVAAGVAVLVIVASEQIAADN------GLGHLIFDSRALFQNDVM 263

Query: 242 LYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
              ++ +  +  ++    + + R +  W+ +
Sbjct: 264 FVGIVCVAVLGVVFSELVRFVGRRLTPWAPR 294


>gi|227508241|ref|ZP_03938290.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227192470|gb|EEI72537.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 340

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   ++  II ++I + +G+++G     +    PF +++   PA  + PL +      +
Sbjct: 148 SLGLWLISFIIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSY 207

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +        L+ F   + + F  I G  +   D+ E A +   + ++  R +++PG  P 
Sbjct: 208 MAE----IFLIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPN 263

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  TA G ++   ++SE+           GLG YI  +   G++ +V   ++IM   
Sbjct: 264 IFIGIFTAMGLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVL 317



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  D   L +    +    L + +I  L   V      + R+      P L ++  IP  
Sbjct: 134 IKTDQKLLIESTWSSLGLWLISFIIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAA 193

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++  T+V F          + +A IF I  +  + + F     + +I  D  E +++  
Sbjct: 194 AWMPLTMVIF--------PTSYMAEIFLIAFAVWFPVAFMTIGGVQSISTDYFESAKTLG 245

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S +Q    + +P ++P +   +  +M   +  +V SEMI          G+G YI  A 
Sbjct: 246 FSEFQILRKVVIPGALPNIFIGIFTAMGLSFTMLVISEMIGAKV------GLGWYINWAK 299

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              +   +  A++ M  V+F         +  ++ ++R
Sbjct: 300 GVGNYTQVYAAIVIM-AVLFSVIFSFLNKLQEYALRWR 336


>gi|126667736|ref|ZP_01738704.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
 gi|126627839|gb|EAZ98468.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
          Length = 282

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   +L A ++ ++        AA SR L   L P+LD+MQ+IP   +L  T+ 
Sbjct: 90  WEDTMATLSLVLYATLLCVVIGIPLGIYAAHSRWLYKFLQPVLDLMQTIPPFVYLIPTLT 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            +  +  +P++L E  ++F  +  Q  +
Sbjct: 150 LFGL---GVVPGVISTVIFAIAAP-----VRLTHLGISQVPKELVEAGKAFGCTNRQLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +M  +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 202 KVELPAAMSSIGAGITQCIMLSLSMVVIAALV-------GADGLGVPVVRALNTVDIGKG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ +    D+  
Sbjct: 255 FEAGLAIVLLAIWMDRFF 272



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 81/241 (33%), Gaps = 16/241 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
              +L +    ++  + +    +   + +  FT    L +  +G       T+  V+   
Sbjct: 45  TGALLWVPPGALILLLTVAAHLRHRRWGLTAFTAFSFLLIWNIGYWEDTMATLSLVLYAT 104

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++  +I IP+GI+      +   +QP   L+   P  V+    +  ++ + L     +  
Sbjct: 105 LLCVVIGIPLGIYAAHSRWLYKFLQPVLDLMQTIPPFVYL---IPTLTLFGLGVVPGVIS 161

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +IF     +      G S  P +  E   +F  T  +    + LP        G     
Sbjct: 162 TVIFAIAAPVRL-THLGISQVPKELVEAGKAFGCTNRQLLFKVELPAAMSSIGAGITQCI 220

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
             + +  +++ +           GLG  +  +       +     L +    + ++RF  
Sbjct: 221 MLSLSMVVIAALVG-------ADGLGVPVVRALNTVDIGKGFEAGLAIVLLAIWMDRFFR 273

Query: 575 H 575
            
Sbjct: 274 Q 274


>gi|331698798|ref|YP_004335037.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953487|gb|AEA27184.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 276

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 15/237 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 V    A   +G +           +      T+  V   +II  ++ IP+G+ I
Sbjct: 48  AASAGWVDASFASSPVGAVRALVHMIGTGELWPPLLSTLESVACGMIITVVVGIPLGLLI 107

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +    +P   ++ + P  VF P+++               +++++   + +L NV
Sbjct: 108 GRSNTLYGLTEPLVSIMYSVPFVVFLPIIIFWFGIGA----EARLVIVVWSAIFPLLINV 163

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           IAGA      + +VA+ F        R +  P   P+ + G   A G A   +IV+E+  
Sbjct: 164 IAGARNVDRHYLQVATVFCAPRLLTLRSVTFPATLPFVLAGVRQAVGRALVGAIVAELF- 222

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                +   GLG  +   T      + +  ++++    + L R +      +  R  
Sbjct: 223 -----MGNAGLGYVVQTETSGFKMDDAMAAIVVIAVLAIVLTRSV-----AWIERRF 269



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 93/266 (34%), Gaps = 21/266 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHG----IQETTVPRDIVDIVPITLDVHSLPQY 64
               +++      L+  V+V+G   I            + P   V  +   +    L   
Sbjct: 22  ARKDKKLTTGTLGLIGLVVVLGAWQIAASAGWVDASFASSPVGAVRALVHMIGTGELWPP 81

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +   M+I+++       L  +S  L  +  P++ IM S+P + FL   + +F 
Sbjct: 82  LLSTLESVACGMIITVVVGIPLGLLIGRSNTLYGLTEPLVSIMYSVPFVVFLPIIIFWFG 141

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                +++    +AIF         +  ++     N+ R   +V+  F          + 
Sbjct: 142 IGAEARLVIVVWSAIF--------PLLINVIAGARNVDRHYLQVATVFCAPRLLTLRSVT 193

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P ++  +  ++       + +E+ +         G+G  +        +   + A
Sbjct: 194 FPATLPFVLAGVRQAVGRALVGAIVAELFMGNA------GLGYVVQTETSGFKMDDAMAA 247

Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWS 267
           ++ +  +  +  +    + R    WS
Sbjct: 248 IVVIAVLAIVLTRSVAWIERRFTFWS 273


>gi|39935689|ref|NP_947965.1| sulfonate ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|39649542|emb|CAE28064.1| possible sulfonate transport system permease protein. Subunit of an
           ABC transporter [Rhodopseudomonas palustris CGA009]
          Length = 280

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 95/244 (38%), Gaps = 17/244 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             + +     +    P  +   +        L ++ + T  R+ +   + +L   +   +
Sbjct: 44  AAVYLGWSNGRLVPPPSRVFSTITELARTGELTRHVAATLGRVAAGFGLGVLSGTLLGAV 103

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           A        +L   +  +++IP + ++   +++       KV    +   F ++      
Sbjct: 104 AGYWSLARRLLDSTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY------ 157

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
               +  ++ ++ R + EV R+FRLSG      + +P  +P  V  + + +  GW FVVA
Sbjct: 158 --LGVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVA 215

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVW 266
           +E +   +      G+G  +    +      I+ A++    +    D L+     P++ W
Sbjct: 216 AEFMGASE------GLGFLLIDGQQLGKPAQIVAAIVIFAVLGKTTDWLIEIATLPLLRW 269

Query: 267 SNKF 270
            + F
Sbjct: 270 QDAF 273



 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 80/265 (30%), Gaps = 17/265 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF---- 371
           L     V                    +L      V    A+ + W +   +        
Sbjct: 5   LDNAAPVTTAAPSAQRRAPRWRGPALGLLLPLTVAVGWEAAVYLGWSNGRLVPPPSRVFS 64

Query: 372 ---TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +      T+ RV     +  +    +G   G+       +    Q L A 
Sbjct: 65  TITELARTGELTRHVAATLGRVAAGFGLGVLSGTLLGAVAGYWSLARRLLDSTVQALRAI 124

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  + PL +  +  +  +       L+  G  + +   V+    +      EV  +F +
Sbjct: 125 PSIAWVPLFILWLGIFETSK----VALIAVGVFFPVYLGVMGAIRSVDRKIVEVGRAFRL 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +G    R I+LP + P YV       G  W   + +E          + GLG  + +  +
Sbjct: 181 SGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAEFMG------ASEGLGFLLIDGQQ 234

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
            G   ++V  ++I        +  +
Sbjct: 235 LGKPAQIVAAIVIFAVLGKTTDWLI 259


>gi|118576124|ref|YP_875867.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Cenarchaeum symbiosum A]
 gi|118194645|gb|ABK77563.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Cenarchaeum symbiosum A]
          Length = 254

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 79/211 (37%), Gaps = 14/211 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++    +++R++V +  A    + +G+ +   P +   I      L + P+  + PL
Sbjct: 53  GSLVYGLATSLWRLIVGLSAAIAGGVVLGVLMARVPAVDQTIGSLVLGLQSIPSIAWVPL 112

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +     +       +  +   G  + +  N   G       + E A +    G R    
Sbjct: 113 ALIWFGPFDAG----IIFVTAVGAVFAVTINTYTGVKNIDPHYVEAARNMGARGGRLVTD 168

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P  FPY ++G       AW   I +E+           GLG  +          +V+
Sbjct: 169 VIIPAAFPYMISGFKQGWAFAWRGVIGAEIL------FSFLGLGFLLHVGRFTSDVSQVI 222

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             +L++    +A++  ++  L       +RL
Sbjct: 223 SVMLVIMAVGMAVDGLVFRRL----EDRVRL 249



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P ++ + +       SL    + +  R++  +  ++    V   L A+   +   +  
Sbjct: 37  PSPYEVGEDLAYGAADGSLVYGLATSLWRLIVGLSAAIAGGVVLGVLMARVPAVDQTIGS 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +QSIP + ++   +++F     G         IF      V+ +T + Y  + NI 
Sbjct: 97  LVLGLQSIPSIAWVPLALIWFGPFDAG--------IIFVTAVGAVFAVTINTYTGVKNID 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E +R+    G +    + +P + P ++       +  W  V+ +E++         
Sbjct: 149 PHYVEAARNMGARGGRLVTDVIIPAAFPYMISGFKQGWAFAWRGVIGAEIL------FSF 202

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  ML ++ V    D L+FR +
Sbjct: 203 LGLGFLLHVGRFTSDVSQVISVMLVIMAVGMAVDGLVFRRL 243


>gi|86360212|ref|YP_472101.1| aliphatic sulfonate ABC transporter permease [Rhizobium etli CFN
           42]
 gi|86284314|gb|ABC93374.1| probable aliphatic sulphonate ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 283

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R       A ++ IP+G+++G    +   + P  QL     A   +P+ +  +  
Sbjct: 89  AISLQRSGTAFAFAVVVGIPLGLFMGQFRLVEQALDPILQLFRQTSALALYPVFILLLGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++ + T + +L + I G         E+A ++       +  +ILP   
Sbjct: 149 GETSK----IFVIFWATLFPVLLSTIGGVKEVDKKLIEMARTYGAGPLTVFSRVILPASV 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P    G   +   A    I +E+           G+G  +  +      P + 
Sbjct: 205 PAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQVMNAQYNFQIPLMF 251



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
             P    L++F+++  + +           P ++ +  +   L   +L    + +  R  
Sbjct: 37  FLPRYGLLISFLVLWQVSSTRGWINPAVFPPLNVILSALWTNLANGALLDDIAISLQRSG 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 97  TAFAFAVVVGIPLGLFMGQFRLVEQALDPILQLFRQTSALALYPVFILLLGLG------- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  S    +  + + L E++R++       F  + +P S+P + 
Sbjct: 150 -ETSKIFVIFWATLFPVLLSTIGGVKEVDKKLIEMARTYGAGPLTVFSRVILPASVPAIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 209 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 251


>gi|265985542|ref|ZP_06098277.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|264664134|gb|EEZ34395.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
          Length = 284

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 95  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +           +    +  SF ++ W   R I+LPG FP 
Sbjct: 153 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDHSLIRMGQSFGLSWWSIVRKIVLPGAFPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 211 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 264

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 265 GLIVNVVI-----GWVERRF 279



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DHSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|46445649|ref|YP_007014.1| putative integral membrane components of the ABC transporters
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46399290|emb|CAF22739.1| putative integral membrane components of the ABC transporters
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 258

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 109/255 (42%), Gaps = 12/255 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RIF      L   ++  ++    +        P  ++  +  +L   +L   +  T  R
Sbjct: 4   QRIFHASLFFLTLTVLWQLLVYAEIWSPVLVPSPLQVLHYLISSLQDGTLISASYVTLKR 63

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   ++ LL       L A+ +     +  +   +Q++P + +    +++F        
Sbjct: 64  LIQGYLVGLLVGIPIGLLNARFQLFEDTIGFLALGLQTLPSVCWAPLAILWFGQ------ 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A  F +    +W++  +    + N+P      +R+    G+  ++ + VP ++P 
Sbjct: 118 --TEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALPF 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M    +  W  ++A+E+ +   T++   G+G+ +    +   + A++  M  ++ V
Sbjct: 176 IISGMKQGWAFAWRSLMAAEIYI---TILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAV 232

Query: 252 IFLYDQLLFRPMIVW 266
             L D+++F P+ V+
Sbjct: 233 GLLVDKVVFSPLEVF 247



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 90/243 (37%), Gaps = 9/243 (3%)

Query: 344 LDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           L + W  +V        +    +  +    +      +I    +T+ R++   ++  ++ 
Sbjct: 16  LTVLWQLLVYAEIWSPVLVPSPLQVLHYLISSLQDGTLISASYVTLKRLIQGYLVGLLVG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+           I   A  L   P+  + PL +             +  ++I G+ 
Sbjct: 76  IPIGLLNARFQLFEDTIGFLALGLQTLPSVCWAPLAILWFG----QTEKAMFFIVIMGSI 131

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W I     AG    P  +   A +    G+  W  +I+P   P+ ++G       AW + 
Sbjct: 132 WSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALPFIISGMKQGWAFAWRSL 191

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           + +E+       L   GLG  +    E  +   V+  + ++    L +++ ++ PL ++ 
Sbjct: 192 MAAEIYI---TILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLLVDKVVFSPLEVFM 248

Query: 582 TRC 584
              
Sbjct: 249 HEK 251


>gi|309791705|ref|ZP_07686196.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308226255|gb|EFO79992.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 290

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 86/217 (39%), Gaps = 14/217 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +  +   ++    ++  R+++   I+ +I +P+G+ IG    I   +      L A P+
Sbjct: 78  ISMLNKGLLLKAVAVSGQRILIGYAISLMIGVPLGLAIGRVRWIHETLGSLVVGLQALPS 137

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +  +          +  +++ G  + I   V +G    P  + + A +    G
Sbjct: 138 VCWLPLAILWMGLSER----AIIFVVVMGALFSITLGVESGVKNTPPLYLKAARTLGARG 193

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              +  +ILP   P  + G       AW + +  E+  +         LG  +    +  
Sbjct: 194 LALYTQVILPAALPAVLAGLKQGWAFAWRSLMAGELLFFSLS------LGNLLQTGRDLN 247

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
              +V+  +L++    +++++ ++ P      R +R+
Sbjct: 248 DASQVMAVMLVIILIGVSIDQMIFAP----AERQVRI 280



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 92/220 (41%), Gaps = 14/220 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +V+ +   L+   L +  + +  R+L    ISL+          + R +   L  
Sbjct: 68  PGPSLVVESLISMLNKGLLLKAVAVSGQRILIGYAISLMIGVPLGLAIGRVRWIHETLGS 127

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +Q++P + +L   +++           +E A IF +    ++++T  +   + N P
Sbjct: 128 LVVGLQALPSVCWLPLAILWMGL--------SERAIIFVVVMGALFSITLGVESGVKNTP 179

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +R+    G   +  + +P ++P ++  +    +  W  ++A E++    +    
Sbjct: 180 PLYLKAARTLGARGLALYTQVILPAALPAVLAGLKQGWAFAWRSLMAGELLFFSLS---- 235

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             +G+ +       D   ++  ML ++ +    DQ++F P
Sbjct: 236 --LGNLLQTGRDLNDASQVMAVMLVIILIGVSIDQMIFAP 273


>gi|332703713|ref|ZP_08423801.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553862|gb|EGJ50906.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 281

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +L A  ++++       L A S+    +++P+LD MQ++P   +L   + +F 
Sbjct: 93  TISTIALVLVATSLAIIIGMPLGILTALSQPAYRLIMPVLDFMQTMPAFVYLIPAIPFFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++AAIF+     +          +  +PR+L E S +F  +  QK   L 
Sbjct: 153 LG--------KVAAIFSTVIFAMPPAIRLTCLGIRQVPRELVEASDAFGATRGQKLLKLQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  ++      VV + MI          G+G  +  AI+  D      A
Sbjct: 205 LPMAASTIMAGVNQTVMLALSMVVVAAMI-------GAKGLGGEVWKAIQRLDPARGFEA 257

Query: 245 MLTMLGVIFLYDQLLFRPMIV 265
            L ++ V  ++D+++ R ++ 
Sbjct: 258 GLGIVIVAMIFDRVMQRIVVR 278



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 13/236 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             ++L +    +   ++          +     +   L        T+  V+V   +A I
Sbjct: 52  PPWLLILLAAGLCWRLSKSRGVALFTMLGLGLIWN--LGFWSPTISTIALVLVATSLAII 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI           I P    +   PA V+    +           +      +  
Sbjct: 110 IGMPLGILTALSQPAYRLIMPVLDFMQTMPAFVYLIPAIPFFGLG----KVAAIFSTVIF 165

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G    P +  E + +F  T  +    + LP      + G       A +
Sbjct: 166 AMPPAIRLTCLGIRQVPRELVEASDAFGATRGQKLLKLQLPMAASTIMAGVNQTVMLALS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +V+ +           GLG  + ++ ++          L +    +  +R +  
Sbjct: 226 MVVVAAMIG-------AKGLGGEVWKAIQRLDPARGFEAGLGIVIVAMIFDRVMQR 274


>gi|327439246|dbj|BAK15611.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 255

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 14/217 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V           L  +   +T R L   +I     FV   L          L 
Sbjct: 37  LPAPSDVVKAGYEQAVSGVLFDHLQISTTRALIGFLIGGSIAFVIGILNGIVPFAQRYLD 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F     GK        IF +  S  + +  + Y  + N+
Sbjct: 97  TTIQMLRNIPNLALIPLVIIWFGVGEEGK--------IFLVAISVFFPIYVNTYHGIRNV 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ + + LS ++ F+ + +  +MP ++  +  S+   W  ++ +E +        
Sbjct: 149 DPRLIEMGKIYNLSKYKLFFKVIILGAMPSILVGIRYSLGIMWLTLIVAETVAASS---- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             GIG     A +   L  ++ A++    +  + D +
Sbjct: 205 --GIGYMSMNAREYMQLDIVVLAIILYAILGKIADSI 239



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  R ++  +I   I   +GI  G  P     +    Q+L   P     PLV+      
Sbjct: 62  ISTTRALIGFLIGGSIAFVIGILNGIVPFAQRYLDTTIQMLRNIPNLALIPLVIIWFGVG 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+     + I  N   G         E+   ++++ ++ +  +I+ G  P
Sbjct: 122 ----EEGKIFLVAISVFFPIYVNTYHGIRNVDPRLIEMGKIYNLSKYKLFFKVIILGAMP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   + G  W   IV+E  +       ++G+G     + E      VVL +++   
Sbjct: 178 SILVGIRYSLGIMWLTLIVAETVA------ASSGIGYMSMNAREYMQLDIVVLAIILYAI 231

Query: 565 FV 566
             
Sbjct: 232 LG 233


>gi|300709404|ref|YP_003735218.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
 gi|299123087|gb|ADJ13426.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3]
          Length = 251

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 79/222 (35%), Gaps = 10/222 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            +          + + W  V     +      +    +                +  RV+
Sbjct: 4   RRRLVRAASILAVPVLWLAVTRLGIVAGLPTPMAVASSFLEEFYRQDFWLSVARSTVRVL 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V  ++A+ + IP+G+ +G     +    P  ++L   P   + P  +  +    L+    
Sbjct: 64  VSFVVAAAVAIPLGLLVGRYTVFADLTFPALEMLRPIPPIAWIPFTILVLPASELS---- 119

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  +   G  + IL N I GA     +F   A S     ++ +R++I P   P    G I
Sbjct: 120 IMFITFLGAFFPILLNTIQGARGVEVEFSRAAQSLGAGSFQTFRHVIYPSALPAIHAGMI 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              G AW   I  E+ + G      TGLG     +   GS+P
Sbjct: 180 VGMGLAWVNLIAGEMVAGG------TGLGFLTWSAYTSGSYP 215



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 100/265 (37%), Gaps = 16/265 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR       +LA  ++   +  L   +     P  +                 +R+T+R
Sbjct: 3   TRRRLVRAASILAVPVLWLAVTRLGI-VAGLPTPMAVASSFLEEFYRQDFWLSVARSTVR 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L + V++         L  +      +  P L++++ IP + ++ FT++          
Sbjct: 62  VLVSFVVAAAVAIPLGLLVGRYTVFADLTFPALEMLRPIPPIAWIPFTILVL-------- 113

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             +EL+ +F  F    + +  +  Q    +  +    ++S     +Q F ++  P ++P 
Sbjct: 114 PASELSIMFITFLGAFFPILLNTIQGARGVEVEFSRAAQSLGAGSFQTFRHVIYPSALPA 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M++ M   W  ++A EM+  G       G+G     A        I+  ++T+  +
Sbjct: 174 IHAGMIVGMGLAWVNLIAGEMVAGGT------GLGFLTWSAYTSGSYPTIIVGIITIGVL 227

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTT 276
             +   L+ R    W   +R   + 
Sbjct: 228 GAISSALV-RLFANWQIGWREVESA 251


>gi|221200267|ref|ZP_03573309.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2M]
 gi|221205947|ref|ZP_03578961.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2]
 gi|221173959|gb|EEE06392.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2]
 gi|221179608|gb|EEE12013.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD2M]
          Length = 298

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++  S        +     + R +  +          +     +++ + I  + V 
Sbjct: 6   PLGSWVDQSVHYLLDHDAATFDAIGRAIEGLAALIEHGLQAVPMWLMMAFFIGIGLWRVG 65

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+      +      F  Q V        IT+   +   II+ ++ IP+GIW     
Sbjct: 66  WRFALFTTLSLLLIFATGFWDQTV--------ITLGLTLSSTIISLVLGIPLGIWAAKSK 117

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++ ++P   L+   PA V+            +   L   +  +             G 
Sbjct: 118 WVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGI 173

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                +  E   +F  T W+    +  P   P  + G       A +  I++ +   G  
Sbjct: 174 RHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-- 231

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  S ++          L +    + L+R 
Sbjct: 232 -----GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|255318460|ref|ZP_05359693.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter radioresistens SK82]
 gi|262378690|ref|ZP_06071847.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
 gi|255304452|gb|EET83636.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter radioresistens SK82]
 gi|262299975|gb|EEY87887.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
          Length = 314

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   +S   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFTAFFISSLIGIPLGILCGFSNKLSQLTEPFIEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRLVDRSLIEAGFTLGTNKIKSLFHVVIPAAMPE 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRNLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVI 291

Query: 566 VLALNRF---LWHPLYLY 580
            L  +     L   L+ +
Sbjct: 292 GLLCDVILMKLGQRLFKW 309



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
                P   +V    +    +   + +A  IS L       L   S +L  +  P ++  
Sbjct: 102 AFTTAPAQANVPWFHESLWHSIKLVFTAFFISSLIGIPLGILCGFSNKLSQLTEPFIEFF 161

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P   F    V         K        I  I    ++     +  +   + R L E
Sbjct: 162 RYLPAPAFGALAVAILGINDAPK--------IAIIVIGTLFQQILIIANTTRLVDRSLIE 213

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
              +   +  +  +++ +P +MP +  N+ + +   W +++ +E+I          GI  
Sbjct: 214 AGFTLGTNKIKSLFHVVIPAAMPEIYRNLRVLLGWAWTYLIVAELIG------STSGITW 267

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +I    + Q+   +  A+L +  +  L D +L +
Sbjct: 268 FITQQARYQNFDNVFAAILIIGVIGLLCDVILMK 301


>gi|222108943|ref|YP_002551209.1| ABC transporter permease (nitrate/sulfonate) [Agrobacterium
           radiobacter K84]
 gi|221727865|gb|ACM30915.1| ABC transporter permease (nitrate/sulfonate) [Agrobacterium
           radiobacter K84]
          Length = 268

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 12/230 (5%)

Query: 343 MLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           ++ I W     G  +  GI    +  +   ++      ++     + +R  V   I S +
Sbjct: 30  IVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVGFGIGSAL 89

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +  G   G      +      Q+L   P+    PLV+                L+ F T
Sbjct: 90  GLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIG----EEAKIFLVAFAT 145

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I  N   G  +      E+  ++ +T     R +ILPG     + G   A G AW  
Sbjct: 146 MFPIYLNTFHGIKSVDQGLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIV 205

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            IV+E  +       ++G+G     + E      VVL +++        +
Sbjct: 206 LIVAETIA------ASSGIGLLATNAREFLQSDVVVLSIILYALLGKLTD 249



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 101/279 (36%), Gaps = 22/279 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPIT 55
           M   +   P  + R     F   AF +++ I+  +       +      P  +++     
Sbjct: 3   MITTSAKTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSL 62

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                L Q+ + +  R      I       +  +    R    +    L ++++IP L  
Sbjct: 63  AASGELVQHMAASFWRAAVGFGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAM 122

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F           E A IF +  + ++ +  + +  + ++ + L E+ R++ L+
Sbjct: 123 VPLVIMWFGIG--------EEAKIFLVAFATMFPIYLNTFHGIKSVDQGLIEMGRNYGLT 174

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P +M  ++  +  ++   W  ++ +E I          GIG     A + 
Sbjct: 175 RTGLVRDVILPGAMSSILVGVRYALGVAWIVLIVAETIAASS------GIGLLATNAREF 228

Query: 236 QDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
                ++ +++    +  L D   +L     + W   ++
Sbjct: 229 LQSDVVVLSIILYALLGKLTDWLARLAENRWLRWHPSYQ 267


>gi|118464424|ref|YP_881628.1| aliphatic sulfonates ABC transporter permease [Mycobacterium avium
           104]
 gi|254775098|ref|ZP_05216614.1| hypothetical protein MaviaA2_10551 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118165711|gb|ABK66608.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium avium 104]
          Length = 275

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 103/250 (41%), Gaps = 16/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVISLL 81
           LA + +  + + +    Q+      ++    + L  +     A   +T+R++  + +  +
Sbjct: 40  LALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHISTVRVIEGLALGGV 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V       SR +   + P L +++++P LG +   +++F           EL  +  
Sbjct: 100 IGIVAGAAVGLSRWVEATVDPPLQMIRALPHLGLIPLFILWFGIG--------ELPKVLL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    V+ +  + + ++  +   + E ++    S +Q+F  + VP + P ++  +  S++
Sbjct: 152 VALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFSFFQRFRRILVPGTAPQVLVGLRQSLA 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ +E I          GIG  I  A     +  I++ +     +  + D ++ R
Sbjct: 212 IAWLTLIVAEQI------NADKGIGFLINNARDFLRIDIIIFGLTIYALLGIITDAVV-R 264

Query: 262 PMIVWSNKFR 271
            +   + ++R
Sbjct: 265 LIERRAVRYR 274



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 86/258 (33%), Gaps = 14/258 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCI 385
           +     ++        +L ++      GV       +   I+           +     I
Sbjct: 26  WARRKWEVVRLVSPLALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHI 85

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV+  + +  +I I  G  +G    + + + P  Q++ A P     PL +       
Sbjct: 86  STVRVIEGLALGGVIGIVAGAAVGLSRWVEATVDPPLQMIRALPHLGLIPLFILWFGIGE 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+  G  + +  N  +          E A     + ++ +R I++PG  P 
Sbjct: 146 L----PKVLLVALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFSFFQRFRRILVPGTAPQ 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   AW   IV+E  +         G+G  I  + +      ++ G+ I    
Sbjct: 202 VLVGLRQSLAIAWLTLIVAEQINADK------GIGFLINNARDFLRIDIIIFGLTIYALL 255

Query: 566 VLALN---RFLWHPLYLY 580
            +  +   R +      Y
Sbjct: 256 GIITDAVVRLIERRAVRY 273


>gi|16119900|ref|NP_396605.1| ABC transporter, membrane spanning protein (nitrate/sulfonate)
           [Agrobacterium tumefaciens str. C58]
 gi|15163566|gb|AAK91046.1| ABC transporter, membrane spanning protein (nitrate/sulfonate)
           [Agrobacterium tumefaciens str. C58]
          Length = 266

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 12/230 (5%)

Query: 343 MLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           ++ I W     G  +  GI    +  +   ++      ++     + +R  V   I S +
Sbjct: 28  IVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVGFGIGSAL 87

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +  G   G      +      Q+L   P+    PLV+                L+ F T
Sbjct: 88  GLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIG----EEAKIFLVAFAT 143

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I  N   G  +      E+  ++ +T     R +ILPG     + G   A G AW  
Sbjct: 144 MFPIYLNTFHGIKSVDQGLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIV 203

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            IV+E  +       ++G+G     + E      VVL +++        +
Sbjct: 204 LIVAETIA------ASSGIGLLATNAREFLQSDVVVLSIILYALLGKLTD 247



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 101/279 (36%), Gaps = 22/279 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPIT 55
           M   +   P  + R     F   AF +++ I+  +       +      P  +++     
Sbjct: 1   MITTSAKTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSL 60

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                L Q+ + +  R      I       +  +    R    +    L ++++IP L  
Sbjct: 61  AASGELVQHMAASFWRAAVGFGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAM 120

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F           E A IF +  + ++ +  + +  + ++ + L E+ R++ L+
Sbjct: 121 VPLVIMWFGIG--------EEAKIFLVAFATMFPIYLNTFHGIKSVDQGLIEMGRNYGLT 172

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P +M  ++  +  ++   W  ++ +E I          GIG     A + 
Sbjct: 173 RTGLVRDVILPGAMSSILVGVRYALGVAWIVLIVAETIAASS------GIGLLATNAREF 226

Query: 236 QDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
                ++ +++    +  L D   +L     + W   ++
Sbjct: 227 LQSDVVVLSIILYALLGKLTDWLARLAENRWLRWHPSYQ 265


>gi|323141723|ref|ZP_08076597.1| putative aliphatic sulfonates transport permease protein SsuC
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413798|gb|EFY04643.1| putative aliphatic sulfonates transport permease protein SsuC
           [Phascolarctobacterium sp. YIT 12067]
          Length = 273

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 11/237 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGC 384
           H+ + +    S   +  +L  +     CG+   +   +   I++   T      +     
Sbjct: 22  HWQKTYPHWVSVASIIILLLFWEAICRCGLVSSLFLPAPSQIISALLTMLADGEIGVSLA 81

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +M+R+++   + S+I + VG+  G          P    L   P     PL +  +   
Sbjct: 82  ASMYRILIGFAVGSLIGLAVGLVTGTSALADKIGNPVVNALYPIPKIALLPLFILWLGIG 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+       ++  G  + +  N  +G         +VA SF+ + W+  + ++LP   P
Sbjct: 142 ELSK----VTIIALGVFFPVAMNTYSGVKNVDTLLIKVAVSFNASWWKTMKSVVLPNALP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
               G   A G +    + +E+ +         G+GA I    +      ++ GV++
Sbjct: 198 MIFAGLRLAAGTSLLLLVAAEMIA------AQVGIGALILHYGDLMITDRLMAGVIV 248



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 90/240 (37%), Gaps = 19/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL----LHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           ++ +P+   + + ++++     +    L        P  I+  +   L    +    + +
Sbjct: 24  QKTYPHWVSVASIIILLLFWEAICRCGLVSSLFLPAPSQIISALLTMLADGEIGVSLAAS 83

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L    +  L       +   S     +  P+++ +  IP +  L   +++      
Sbjct: 84  MYRILIGFAVGSLIGLAVGLVTGTSALADKIGNPVVNALYPIPKIALLPLFILWLGIG-- 141

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 EL+ +  I     + +  + Y  + N+   L +V+ SF  S W+    + +P +
Sbjct: 142 ------ELSKVTIIALGVFFPVAMNTYSGVKNVDTLLIKVAVSFNASWWKTMKSVVLPNA 195

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + ++       +VA+EMI          GIG+ I     +  +   L A + +
Sbjct: 196 LPMIFAGLRLAAGTSLLLLVAAEMIA------AQVGIGALILH-YGDLMITDRLMAGVIV 248


>gi|309779007|ref|ZP_07673777.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308922354|gb|EFP67981.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 298

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   LV       L          D V  +   L   +L      +   +L+   + L 
Sbjct: 55  LIVLALVWEGGARWLDNPLLLPTFSDTVQALWAGLASGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   +R     L  +  +   +P +  L   +V+F             + IF 
Sbjct: 115 LSCALVVLGISNRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGNG--------SLIFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++    +     G+G YI     +  +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVFGVSS--GQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 99/288 (34%), Gaps = 16/288 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +SN        +   R    E  L +         L      +V  +      + +  
Sbjct: 12  ADISNRAPVYSTPVAFERIGVVEKPLSIAERLYEQAWLRKLVILIVLALVWEGGARWLDN 71

Query: 367 IVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIG--------FRPHISS 416
            +   T+ D +  +W G    T+F  +   +   +    +G+ +                
Sbjct: 72  PLLLPTFSDTVQALWAGLASGTLFARIGTSMQTLLAGYALGLALSCALVVLGISNRLGQD 131

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    P+ +      + +    L  +++    W +  N  AG  +  
Sbjct: 132 FLETLTAMFNPLPAIALLPIALVWFGLGNGS----LIFVIVHSVVWAVSLNTHAGFLSVS 187

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +    
Sbjct: 188 NTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            GLG YI E+  +   PEV  G+L +    L +   ++  L     + 
Sbjct: 246 GGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTLEARTVKR 293


>gi|306840616|ref|ZP_07473368.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306289354|gb|EFM60590.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 272

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGIGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQYASR 67
             P+    +   + + +I     G +           P  +++          L Q+   
Sbjct: 23  FAPSPVRGIGLAVFVVLIVAAEIGTRSGFISNLTLPRPSAVLETFGQLWQTGMLWQHLLP 82

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R++    + +        +      +   LVP++  +  IP +  L   V++F    
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGID- 141

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E++    I          + Y ++ N+ R L  + +SF LS W     + +P 
Sbjct: 142 -------EMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPG 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  + +S+S     +VA+EM+          GIGSYI  A    DL  +   +  
Sbjct: 195 AFPAILSGLRVSISIAIILLVAAEMLG------AQYGIGSYILEAGSLYDLEKLFAGVAI 248

Query: 248 MLGVIFLYDQLLF---RPMIVW 266
           +  +  + + ++    R  + W
Sbjct: 249 LSVMGLIVNVVIGWVERRFLNW 270


>gi|30021027|ref|NP_832658.1| alkanesulfonate ABC transporter permease [Bacillus cereus ATCC
           14579]
 gi|228959137|ref|ZP_04120836.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229128256|ref|ZP_04257237.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-Cer4]
 gi|229145492|ref|ZP_04273876.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-ST24]
 gi|296503449|ref|YP_003665149.1| alkanesulfonate ABC transporter permease [Bacillus thuringiensis
           BMB171]
 gi|29896580|gb|AAP09859.1| Alkanesulfonates transport system permease protein [Bacillus cereus
           ATCC 14579]
 gi|228637945|gb|EEK94391.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-ST24]
 gi|228655115|gb|EEL10972.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-Cer4]
 gi|228800526|gb|EEM47444.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|296324501|gb|ADH07429.1| alkanesulfonate ABC transporter permease [Bacillus thuringiensis
           BMB171]
          Length = 282

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEAKFLRWRDNFKGET 280



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|167041923|gb|ABZ06662.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_133I24]
          Length = 295

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T   +     + +        L +KS R    ++P+LD+MQ+IP   +L   ++    
Sbjct: 101 MATVAIITVCTTLCIAVGIPLGVLMSKSDRAEKTILPVLDMMQTIPSFVYLVPILMLLG- 159

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              GKV G     I+A        +       +  + ++  E   +F  + WQ+   + +
Sbjct: 160 --IGKVPGLIAVCIYA-----APPIIRLTNLGIREVDKETLEAIDAFGATTWQRLTKVQI 212

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   +  ++      VV + MI V        G+G  I  AI  Q L   L   
Sbjct: 213 PLALPTIFAGVNQTIMMALAMVVIASMIGV-------KGLGVPILRAISNQYLALGLMNG 265

Query: 246 LTMLGVIFLYDQL 258
           L ++ +  ++D++
Sbjct: 266 LAIVALAIIFDRV 278



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 79/276 (28%), Gaps = 18/276 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           + I  S   F     + ++     L        +  L       +  +  + WF      
Sbjct: 20  KGIDLSFRQFSREYGDGIEAFFDPLLFFLVWLEKLLLNSPWPIIILAIAILAWFGSRSWA 79

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
               +  +   I     + D +        T+  + V   +   + IP+G+ +       
Sbjct: 80  LAVGSALAFMLIGYFGMWNDCM-------ATVAIITVCTTLCIAVGIPLGVLMSKSDRAE 132

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I P   ++   P+ V+   ++  +        +   + +       I+     G    
Sbjct: 133 KTILPVLDMMQTIPSFVYLVPILMLLGIG----KVPGLIAVCIYAAPPIIRLTNLGIREV 188

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E   +F  T W+    + +P   P    G       A    +++ +         
Sbjct: 189 DKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALAMVVIASMIG------- 241

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  I  +         ++  L +    +  +R
Sbjct: 242 VKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDR 277


>gi|89095405|ref|ZP_01168319.1| putative permease [Oceanospirillum sp. MED92]
 gi|89080343|gb|EAR59601.1| putative permease [Oceanospirillum sp. MED92]
          Length = 299

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LVI +I  L +    +      V I  + +    +     RT   +L   ++++      
Sbjct: 65  LVIAVIAGLAYLASRSWKLGLGVVISFMLIGYFGMWDNTMRTMSIILVCTLMAIALGVPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R    + P+LD+MQ++P   +L   V+             ++  + A+    
Sbjct: 125 GIAMARSDRAQAFVTPVLDVMQTMPAFVYLIPVVMLLGIG--------KIPGVIAVIIYA 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  + +D+ E + ++  S +Q+   + +P +MP ++  +  ++      
Sbjct: 177 IPPVIRLTNLGIRLVDKDVMEAATAYGASPFQRLTGVQLPLAMPTIMAGINQTIMMSLSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRV 281



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 78/232 (33%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +             +W+    +V  F       +      TM  ++V  ++A  
Sbjct: 60  ATPWWLVIAVIAGLAYLASRSWKLGLGVVISFMLIGYFGMWDNTMRTMSIILVCTLMAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +       + + P   ++   PA V+   VV  +        +   + +I  
Sbjct: 120 LGVPIGIAMARSDRAQAFVTPVLDVMQTMPAFVYLIPVVMLLGIG----KIPGVIAVIIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A+++  + ++    + LP   P  + G       + +
Sbjct: 176 AIPPVIRLTNLGIRLVDKDVMEAATAYGASPFQRLTGVQLPLAMPTIMAGINQTIMMSLS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  + +S     F   +L  L +    +  +R
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDR 280


>gi|319652002|ref|ZP_08006123.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317396293|gb|EFV77010.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 251

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 14/218 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             +   +       +L      +  R+   + ISL+   +   L  KS+     L  ++ 
Sbjct: 36  SSVFSALVEGFQDKTLIYDLIASFKRLAVGLAISLVIGTLIGILLGKSKTADETLGAVIL 95

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            +QS+P + +L   +++F           E A IF       + M  +M   + N+    
Sbjct: 96  ALQSVPSIVWLPIAIMWFGLN--------EKAVIFVTILGGTFVMALNMRTGIKNVSPLY 147

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +++   +G   F  +  P S+P +V    ++ +  W  ++A E++  G      PG+
Sbjct: 148 IKAAQTMGANGIDLFTRVIFPASIPYVVTGSRLAWAFAWRALMAGELLSTG------PGL 201

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           G  +  A     +  ++  M+ +  +  + DQ +F+ +
Sbjct: 202 GYTLRYASDFGRMDIVIGVMIIIGAIGMIVDQFIFQRI 239



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+    +  R+ V + I+ +I   +GI +G        +      L + P+ V+ P+ +
Sbjct: 51  LIYDLIASFKRLAVGLAISLVIGTLIGILLGKSKTADETLGAVILALQSVPSIVWLPIAI 110

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  + I G  + +  N+  G       + + A +    G   +  +I
Sbjct: 111 MWFGL----NEKAVIFVTILGGTFVMALNMRTGIKNVSPLYIKAAQTMGANGIDLFTRVI 166

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY VTG+  A   AW A +  E+ S G       GLG  +  +++ G    V+  
Sbjct: 167 FPASIPYVVTGSRLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGRMDIVIGV 220

Query: 559 VLIMCCFVLALNRFLWHPL 577
           ++I+    + +++F++  +
Sbjct: 221 MIIIGAIGMIVDQFIFQRI 239


>gi|46202251|ref|ZP_00053506.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 264

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 92/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   L   +   L     +    P  +   +        L  +   T  R+       + 
Sbjct: 23  VGLALAWEVAVALKWADGRLLPTPSRVFTTLAALAKTGELTNHVLATLQRVALGFGFGVA 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   ++        ++ P L  +++IP + ++   +++F           E + +  
Sbjct: 83  AGTVLGAVSGYWSLARRLIDPTLQALRNIPSIAWVPMFILWFGIF--------ETSKVIL 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  S+  ++  + R L EV R FR S  +    + +P ++P  V ++   + 
Sbjct: 135 IAVGVFFPIYLSLSGAILGVDRKLVEVGRIFRFSHAEMITRILLPATLPAYVISLRSGLG 194

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GW FVVA+E +   +      G+G  +    +      IL ++     +  + D LL  
Sbjct: 195 LGWMFVVAAEFMGAEE------GLGFLLVDGQQTGRPAVILASITAFAILGKITDWLLAS 248

Query: 262 ---PMIVWSNKFR 271
                + W + F+
Sbjct: 249 ASARFLTWQDSFK 261



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ RV +           +G   G+       I P  Q L   P+  + P+ +     
Sbjct: 67  LATLQRVALGFGFGVAAGTVLGAVSGYWSLARRLIDPTLQALRNIPSIAWVPMFILWFGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +  +      +L+  G  + I  ++            EV   F  +       I+LP   
Sbjct: 127 FETSK----VILIAVGVFFPIYLSLSGAILGVDRKLVEVGRIFRFSHAEMITRILLPATL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P YV    +  G  W   + +E            GLG  + +  + G    ++  +    
Sbjct: 183 PAYVISLRSGLGLGWMFVVAAEFMG------AEEGLGFLLVDGQQTGRPAVILASITAFA 236

Query: 564 CFVLALNRFL 573
                 +  L
Sbjct: 237 ILGKITDWLL 246


>gi|293611277|ref|ZP_06693575.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826528|gb|EFF84895.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124007|gb|ADY83530.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 265

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I +R+ P IF +L  V+     +  L   +    P  +V      L    L Q+   +  
Sbjct: 15  IGQRLLPWIFPILLLVVWQIASSSGLLESRILPAPTAVVSAFWHLLVSGELWQHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALLGLLIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   QLL R ++ W + ++
Sbjct: 241 LGKLADVLAQLLERYLLRWHSGYQ 264



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + I  N 
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINT 150

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S
Sbjct: 151 YHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS 210

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 211 ------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248


>gi|169796457|ref|YP_001714250.1| ABC transporter membrane protein [Acinetobacter baumannii AYE]
 gi|213156431|ref|YP_002318851.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AB0057]
 gi|215483920|ref|YP_002326145.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|301347140|ref|ZP_07227881.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB056]
 gi|301510144|ref|ZP_07235381.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB058]
 gi|301594671|ref|ZP_07239679.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB059]
 gi|332855005|ref|ZP_08435661.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332869477|ref|ZP_08438795.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
 gi|169149384|emb|CAM87268.1| putative transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213055591|gb|ACJ40493.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii AB0057]
 gi|213986111|gb|ACJ56410.1| Taurine transport system permease protein tauC [Acinetobacter
           baumannii AB307-0294]
 gi|332727699|gb|EGJ59112.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150]
 gi|332732707|gb|EGJ63929.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113]
          Length = 314

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALN 570
            L  +
Sbjct: 292 GLVCD 296



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 121 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 180

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 181 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 232

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 233 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 286

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D +L +
Sbjct: 287 IIGVIGLVCDWVLMK 301


>gi|118474363|ref|YP_891796.1| taurine transport system permease protein TauC [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118413589|gb|ABK82009.1| taurine transport system permease protein TauC [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 245

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R    ++      I VG   G  P IS    P   LL       + PLV+       
Sbjct: 51  SLYRYFWGLVAGLSGGIFVGFIFGLFPKISMAFDPIINLLRPVSPIAWVPLVLIIFGIGD 110

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++ +   + +L          P +   V+ +F  + W+    +I P  F  
Sbjct: 111 K----PTIFIISYAVFFPVLLLASKAVQDVPKELIIVSKNFGASKWQVLSGVIFPSSFLM 166

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   A   AW   +V E+          TGLG  I ++  +     V+  + ++   
Sbjct: 167 LISGLKLAASMAWINLVVGEMLG------AQTGLGYLIIDARNQLRIDIVLAVICVIGVV 220

Query: 566 VLALNRFL 573
              +N+  
Sbjct: 221 GWVINQLF 228



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 91/236 (38%), Gaps = 15/236 (6%)

Query: 25  FVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            + V  ++ +   G  E    P+     +   +    L      +  R    +V  L   
Sbjct: 7   ILTVFALLVLWQLGSDELIPSPKQSFMALCEIVQKGVLQIGIIDSLYRYFWGLVAGLSGG 66

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                +     ++ M   PI+++++ +  + ++   ++ F           +   IF I 
Sbjct: 67  IFVGFIFGLFPKISMAFDPIINLLRPVSPIAWVPLVLIIFGIG--------DKPTIFIIS 118

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  + +     +++ ++P++L  VS++F  S WQ    +  P S   L+  + ++ S  
Sbjct: 119 YAVFFPVLLLASKAVQDVPKELIIVSKNFGASKWQVLSGVIFPSSFLMLISGLKLAASMA 178

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           W  +V  EM+          G+G  I  A  +  +  +L  +  +  V ++ +QL 
Sbjct: 179 WINLVVGEMLGAQT------GLGYLIIDARNQLRIDIVLAVICVIGVVGWVINQLF 228


>gi|225377017|ref|ZP_03754238.1| hypothetical protein ROSEINA2194_02661 [Roseburia inulinivorans DSM
           16841]
 gi|225211153|gb|EEG93507.1| hypothetical protein ROSEINA2194_02661 [Roseburia inulinivorans DSM
           16841]
          Length = 261

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 92/249 (36%), Gaps = 21/249 (8%)

Query: 18  NIFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTL 70
           +I  ++ FV +       + L        P  ++      L     D  +LPQ+   +  
Sbjct: 12  SILSVIGFVGIWWFCCDVLKLTSSSTLPGPVTVIKTFIAKLSSSAPDGATLPQHIGSSLK 71

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L    + ++         A  +++ +   PI D+++ +P L ++   ++ F      K
Sbjct: 72  IALGGWALGVVIGTPLGICMAWYKKVDLFARPIFDLLRPVPGLAWIPLMIILFGIGITPK 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   I  +F S       + Y  +         V ++F  S  Q    + +P ++P
Sbjct: 132 --------IVTVFLSAFVPCVLNSYTGIRQTKDVHLWVGQTFGASDTQMLLNIAIPTALP 183

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  + +++   W  +VA+EM+          G+G  I  A        I+  M+ +  
Sbjct: 184 MIMTGIRVALGAAWTCIVAAEMLA------STKGLGYMIQQARGIYRPDIIICGMIAIGA 237

Query: 251 VIFLYDQLL 259
           +  ++  +L
Sbjct: 238 IGAVFSGIL 246



 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 86/252 (34%), Gaps = 17/252 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCV-VCGVAIGIAWQSIGYIVNHF------TYQDVLYVIW 381
           ++++ + S   V   + I+WFC  V  +           ++  F      +  D   +  
Sbjct: 5   KSYIWILSILSVIGFVGIWWFCCDVLKLTSSSTLPGPVTVIKTFIAKLSSSAPDGATLPQ 64

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++   +    +  +I  P+GI + +   +    +P   LL   P   + PL++   
Sbjct: 65  HIGSSLKIALGGWALGVVIGTPLGICMAWYKKVDLFARPIFDLLRPVPGLAWIPLMIILF 124

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                       + +        + N   G     +    V  +F  +  +    I +P 
Sbjct: 125 GIG----ITPKIVTVFLSAFVPCVLNSYTGIRQTKDVHLWVGQTFGASDTQMLLNIAIPT 180

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +TG   A G AW   + +E+ +       T GLG  I ++        ++ G++ 
Sbjct: 181 ALPMIMTGIRVALGAAWTCIVAAEMLA------STKGLGYMIQQARGIYRPDIIICGMIA 234

Query: 562 MCCFVLALNRFL 573
           +       +  L
Sbjct: 235 IGAIGAVFSGIL 246


>gi|312109385|ref|YP_003987701.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|311214486|gb|ADP73090.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 258

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 82/235 (34%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L I W  F  +  ++  +    +  ++   T      +     ++  R  +  +I 
Sbjct: 16  VPILLLIAWQLFSAIGWISERVLPSPLEVLLAAITLTKNGELFTNIGVSFTRAFIGFVIG 75

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I + +G+  G  P     +    Q+    P     P+V+                L+I
Sbjct: 76  GGIGLILGLLNGIYPVAEKYLNTTIQMFRNIPHLALIPIVILWFGVG----EEAKIFLVI 131

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + I  N   G  + P D  E+   + ++ W  +  +I P   P  + G   A G  
Sbjct: 132 IGVFFPIYINTYHGVISVPKDLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVM 191

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  +       ++G+G     + E      VVL +L+        +  
Sbjct: 192 WLTLIVAETVA------ASSGIGYMAMNAREFMQLDVVVLSILLYALLGKLADSL 240



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 93/258 (36%), Gaps = 18/258 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
                +  ++   + + +    +     P +++           L      +  R     
Sbjct: 13  PWIVPILLLIAWQLFSAIGWISERVLPSPLEVLLAAITLTKNGELFTNIGVSFTRAFIGF 72

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI      +   L          L   + + ++IP L  +   +++F           E 
Sbjct: 73  VIGGGIGLILGLLNGIYPVAEKYLNTTIQMFRNIPHLALIPIVILWFGVG--------EE 124

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +     + +  + Y  + ++P+DL E+ + + LS W  F  +  P ++P ++  +
Sbjct: 125 AKIFLVIIGVFFPIYINTYHGVISVPKDLIEMGKVYGLSKWILFSNVIFPSALPSILVGL 184

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E +          GIG     A +   L  ++ ++L    +  L D
Sbjct: 185 RYALGVMWLTLIVAETVAASS------GIGYMAMNAREFMQLDVVVLSILLYALLGKLAD 238

Query: 257 QL---LFRPMIVWSNKFR 271
            L   L R  + W+  ++
Sbjct: 239 SLAKCLERYFLKWNPAYQ 256


>gi|261215926|ref|ZP_05930207.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260917533|gb|EEX84394.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
          Length = 284

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 22/293 (7%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
              W     L  +   + +T   +R           S  R   +       V   +    
Sbjct: 2   KKPWPPTRSLPMSDADVSKTARPVRPVEFRGGGFAPSPVRGIGLAVFVVLMVAAEIGTRS 61

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI-------TMFRVVVLIIIASIIWIPVGIWIGFRP 412
            + S   +       +    +W   +       ++ R+++   +   + I +G+ IG   
Sbjct: 62  GFISNLTLPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFS 121

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
           ++ + + P    L   P     PL V           +   +L+ FGT    +       
Sbjct: 122 YVRAGLVPLVAALFPIPKIALLPLFVIWFGI----DEMSKYMLIAFGTFTPTVVATYGAV 177

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                    +  SF ++ W   R I+LPG FP  ++G   +   A    + +E+      
Sbjct: 178 DNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG---- 233

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                G+G+YI E+       ++  GV I+    L +N  +      +  R  
Sbjct: 234 --AQYGVGSYILETGSLYDLEKLFAGVAILSVMGLIVNVVI-----GWVERRF 279



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI       DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILETGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|26987037|ref|NP_742462.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148545570|ref|YP_001265672.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|24981657|gb|AAN65926.1|AE016220_8 glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148509628|gb|ABQ76488.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313496659|gb|ADR58025.1| Glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas putida BIRD-1]
          Length = 281

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I +   L H IQ        V +  + +      Q    T  ++  A V+ ++    
Sbjct: 52  FVLIALFAALAHFIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVP 111

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA        + P+LD+MQ++P   +L  T+  F     G V G     +FAI   
Sbjct: 112 LGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP 168

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  +C++P++L +  ++F  S  Q    + +P +MP +   +   +     
Sbjct: 169 -----IRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLS 223

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   D+     A L ++ +  + D++  +P
Sbjct: 224 MVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 70/216 (32%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    ++   F     L        T+ +V    ++  +I +P+GI    +P   + ++P
Sbjct: 69  WALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGICDVPQELM 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|225686270|ref|YP_002734242.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|256043365|ref|ZP_05446298.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111625|ref|ZP_05452620.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256262594|ref|ZP_05465126.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260564570|ref|ZP_05835055.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|225642375|gb|ACO02288.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|260152213|gb|EEW87306.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|263092380|gb|EEZ16633.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|326410629|gb|ADZ67693.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326553921|gb|ADZ88560.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 272

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEARSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEARSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|218461316|ref|ZP_03501407.1| aliphatic sulfonate ABC transporter permease [Rhizobium etli Kim 5]
          Length = 283

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R       A ++ IP+G+++G    +   + P  QL     A   +P+ +  +  
Sbjct: 89  AISLQRSGTAFAFAVVVGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++ + T + +L   I G         E+A ++       +R +ILP   
Sbjct: 149 GETSK----IFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGSLTVFRRVILPASV 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P    G   +   A    I +E+           G+G  +  +      P + 
Sbjct: 205 PAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQVMNAQYNFQIPLMF 251



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
           + P    L+AF+++    +           P ++ +  +   L   +L    + +  R  
Sbjct: 37  LLPRYGLLIAFLVLWQASSTRGWINPAIFPPLNVILSALWTNLANGALLDDIAISLQRSG 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 97  TAFAFAVVVGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGLG------- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  +    +  + + L E++R++       F  + +P S+P + 
Sbjct: 150 -ETSKIFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGSLTVFRRVILPASVPAIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 209 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 251


>gi|149908274|ref|ZP_01896938.1| putative permease [Moritella sp. PE36]
 gi|149808816|gb|EDM68749.1| putative permease [Moritella sp. PE36]
          Length = 296

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI ++ +  +    +      V +    +    +     RT   +L + +++++     
Sbjct: 65  IVIAVLAVFAYIASRSWKLTLGVVVAFFLIGFFGMWDNTMRTMSIILISTMLAVIIGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ PILDIMQ++P   +L   V+             ++  + A+    
Sbjct: 125 GISMARSNRVQSVVTPILDIMQTMPAFVYLIPVVMLLGIG--------KIPGVIAVIIYA 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +       +  + +++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 177 VPPVIRLTNLGIRLVDKEVLEAATAYGASPMQRLFGVQLPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGLAIVALAIIFDRI 281



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S    +     V       +W+    +V  F       +      TM  +++  ++A I
Sbjct: 60  SSPWWIVIAVLAVFAYIASRSWKLTLGVVVAFFLIGFFGMWDNTMRTMSIILISTMLAVI 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI +     + S + P   ++   PA V+   VV  +        +   + +I  
Sbjct: 120 IGIPIGISMARSNRVQSVVTPILDIMQTMPAFVYLIPVVMLLGIG----KIPGVIAVIIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A+++  +  +    + LP   P  + G       A  
Sbjct: 176 AVPPVIRLTNLGIRLVDKEVLEAATAYGASPMQRLFGVQLPLAMPNIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  + +S     F   ++  L +    +  +R 
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGLAIVALAIIFDRI 281


>gi|161520035|ref|YP_001583462.1| choline ABC transporter, permease protein [Burkholderia multivorans
           ATCC 17616]
 gi|189353784|ref|YP_001949411.1| glycine betaine/proline transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344085|gb|ABX17170.1| choline ABC transporter, permease protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337806|dbj|BAG46875.1| glycine betaine/proline transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 298

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL         AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLALGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 85/280 (30%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++  S        +     + R +  +          +     +++ + I  + V 
Sbjct: 6   PLGSWVDQSVHYLLDHDAATFDAVGRAIEGLAALIEHGLQAVPMWLMMAFFIGIGLWRVG 65

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+      +      F  Q V        IT+   +   II+  + IP+GIW     
Sbjct: 66  WRFALFTTLSLLLIFATGFWDQTV--------ITLGLTLSSTIISLALGIPLGIWAAKSK 117

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++ ++P   L+   PA V+            +   L   +  +             G 
Sbjct: 118 WVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGI 173

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                +  E   +F  T W+    +  P   P  + G       A +  I++ +   G  
Sbjct: 174 RHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-- 231

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  S ++          L +    + L+R 
Sbjct: 232 -----GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|322507919|gb|ADX03373.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii 1656-2]
 gi|323517513|gb|ADX91894.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
          Length = 293

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 101 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 158

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 159 --NDAPKIAIIVIGTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPD 216

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         T+G+  +I +     +F  V   +LI+   
Sbjct: 217 IYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVI 270

Query: 566 VLALN 570
            L  +
Sbjct: 271 GLVCD 275



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 100 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 159

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 160 DAPK--------IAIIVIGTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIP 211

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L
Sbjct: 212 AALPDIYRDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAIL 265

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  + D +L +
Sbjct: 266 IIGVIGLVCDWVLMK 280


>gi|307329018|ref|ZP_07608186.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306885380|gb|EFN16398.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 326

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 90/222 (40%), Gaps = 12/222 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+ W ++  +       ++  ++W    ++ R +   +IA +I  P+G+ +     I + 
Sbjct: 104 GLVWDALRRLWLQ---GELFDIVW---TSVSRGLFGFLIALVIATPLGLIVARVKFIRAA 157

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L + P+  + P  V  +       +  +  +++ G    I   ++AG    P 
Sbjct: 158 LGPILSGLQSLPSVAWVPPAVIWLGL----NDQMMYTVILLGAVPSIANGLVAGIDQVPP 213

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            F     +    G    R+I+LP   P YV G       +W + + +E+ +         
Sbjct: 214 LFLRAGRTLGARGLVSARHILLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--KSPDLGL 271

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           GLG Y+           V+LG+L++    +A+   ++ P+  
Sbjct: 272 GLGQYLENQRNNSDMAGVLLGILMILLVGIAIELLIFAPIER 313



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 97/254 (38%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P I  +   + +  ++ +  +    +   P  + D +        L      +  R
Sbjct: 70  QKVLPPIVAVAVVLALWKVLVVAKVTDDYKLPDPGLVWDALRRLWLQGELFDIVWTSVSR 129

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +I+L+       + A+ + +   L PIL  +QS+P + ++   V++         
Sbjct: 130 GLFGFLIALVIATPLGLIVARVKFIRAALGPILSGLQSLPSVAWVPPAVIWLGLNDQMMY 189

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+    G     ++ +P ++PG
Sbjct: 190 T--------VILLGAVPSIANGLVAGIDQVPPLFLRAGRTLGARGLVSARHILLPAALPG 241

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I     +    G+G Y+       D+  +L  +L +L V
Sbjct: 242 YVAGLKQGWAFSWRSLMAAEIIAKSPDLGL--GLGQYLENQRNNSDMAGVLLGILMILLV 299

Query: 252 IFLYDQLLFRPMIV 265
               + L+F P+  
Sbjct: 300 GIAIELLIFAPIER 313


>gi|163740528|ref|ZP_02147922.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter
           gallaeciensis 2.10]
 gi|161386386|gb|EDQ10761.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter
           gallaeciensis 2.10]
          Length = 283

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R+VV   + + + I VG+ IG   ++ + + P    L   P     PL V      
Sbjct: 93  VSLSRLVVGAALGASVGIGVGLMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI- 151

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+ FGT    +                +  SF+++     R I+LPG  P
Sbjct: 152 ---DEASKYALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   +   A    + +E+           G+GAYI E+        +  GV I+  
Sbjct: 209 GILSGLRISLAIAIILLVAAEMLG------AEHGIGAYILEAGSLYDLERLFAGVAILSI 262

Query: 565 FVLA---LNRFLWHPLYLY 580
             +    L   +   L  +
Sbjct: 263 LGVLVSSLIGLIERRLLRW 281



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +        L  + S +  R++    +          +      +   LV
Sbjct: 68  LPRPSDVLATLRELYASGLLWTHVSVSLSRLVVGAALGASVGIGVGLMIGLFSYVRAGLV 127

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F      K           I          + Y ++ N+
Sbjct: 128 PLVAALFPIPKIALLPLFVIWFGIDEASKYA--------LIAFGTFTPTVVATYGAVDNV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+        
Sbjct: 180 DRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------A 233

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             GIG+YI  A    DL  +   +  +  +  L      L+ R ++ W
Sbjct: 234 EHGIGAYILEAGSLYDLERLFAGVAILSILGVLVSSLIGLIERRLLRW 281


>gi|258654492|ref|YP_003203648.1| binding-protein-dependent transporters inner membrane component
           [Nakamurella multipartita DSM 44233]
 gi|258557717|gb|ACV80659.1| binding-protein-dependent transport systems inner membrane
           component [Nakamurella multipartita DSM 44233]
          Length = 300

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 94/261 (36%), Gaps = 13/261 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC- 384
              E + +      V  +L +    ++  +   +  +    + +     D L  +  G  
Sbjct: 34  RHREPWWRRLGTSIVPPLLALVLVLIIWEIVYLLGVKPEVMLPSPAAVGDELVRLLQGGQ 93

Query: 385 ------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  ++ R ++   +A +I +P+G+ +     I     P    L + P+  + PL +
Sbjct: 94  AWQTIWTSLSRGLIGFAMAIVIAVPIGLLVARFKWIRLSFGPLLSGLQSMPSVAWVPLAI 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        + ++++ G    I   + AG    P  +  V     +  W   R+++
Sbjct: 154 LWFQISPA----MIYMVVLLGAVPSIANGLTAGIDQVPPLYTRVGKVLGLGWWGQARHVL 209

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P ++ G       +W + + +E+           GLG  + +  +    P +  G
Sbjct: 210 LPAALPGFLAGLRQGWAFSWRSLMAAELIVTSSKL--GFGLGQLMNQGRDLSDAPLLYAG 267

Query: 559 VLIMCCFVLALNRFLWHPLYL 579
           ++++    + +   ++ PL  
Sbjct: 268 LILIFVVGVGVELIMFRPLER 288



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 93/240 (38%), Gaps = 11/240 (4%)

Query: 27  LVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++  I+ +L    +     P  + D +   L      Q    +  R L    ++++    
Sbjct: 59  IIWEIVYLLGVKPEVMLPSPAAVGDELVRLLQGGQAWQTIWTSLSRGLIGFAMAIVIAVP 118

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L A+ + + +   P+L  +QS+P + ++   +++F          +       +   
Sbjct: 119 IGLLVARFKWIRLSFGPLLSGLQSMPSVAWVPLAILWFQI--------SPAMIYMVVLLG 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V ++   +   +  +P     V +   L  W +  ++ +P ++PG +  +    +  W 
Sbjct: 171 AVPSIANGLTAGIDQVPPLYTRVGKVLGLGWWGQARHVLLPAALPGFLAGLRQGWAFSWR 230

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            ++A+E+IV    +    G+G  +       D   +   ++ +  V    + ++FRP+  
Sbjct: 231 SLMAAELIVTSSKLG--FGLGQLMNQGRDLSDAPLLYAGLILIFVVGVGVELIMFRPLER 288


>gi|284030568|ref|YP_003380499.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283809861|gb|ADB31700.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 300

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 102/261 (39%), Gaps = 11/261 (4%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLP 62
            N L   I+ R+ P +  ++  + V   +       + +   P D+   +   +    + 
Sbjct: 36  QNGLGRRIAGRVLPPVGAIVLLIAVWQALWAAAFWPEFKLPAPADVWAQIWQLVSTGEIL 95

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R +    ISLL         A    +   + P++  +QS+P + ++   +++
Sbjct: 96  SLFWVSVHRAVIGFAISLLIAVPLGLAIANITVVRRGIGPLVSGLQSLPSVAWVPAAILW 155

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           + A  + +    V ++   +   L  +P  L  V ++     W    Y
Sbjct: 156 FGLN--------DRAIYWVVLLGAVPSIANGLVSGLDQVPPILPRVGKALGAGRWGGIRY 207

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PG +  +    +  W  ++A+E+I     +    G+G ++   +   D+  + 
Sbjct: 208 ILLPAALPGFLGGLKQGWAFSWRSLMAAELIATSPDLGE--GLGQFLHNGMSLSDISMVF 265

Query: 243 YAMLTMLGVIFLYDQLLFRPM 263
             +L +  V    + L+FRP+
Sbjct: 266 AGILLIFVVGVGIELLVFRPL 286



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 12/252 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------ 385
            ++           +    V   +     W           +  +  ++  G I      
Sbjct: 41  RRIAGRVLPPVGAIVLLIAVWQALWAAAFWPEFKLPAPADVWAQIWQLVSTGEILSLFWV 100

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R V+   I+ +I +P+G+ I     +   I P    L + P+  + P  +       
Sbjct: 101 SVHRAVIGFAISLLIAVPLGLAIANITVVRRGIGPLVSGLQSLPSVAWVPAAILWFGL-- 158

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    I   +++G    P     V  +     W   RYI+LP   P 
Sbjct: 159 --NDRAIYWVVLLGAVPSIANGLVSGLDQVPPILPRVGKALGAGRWGGIRYILLPAALPG 216

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           ++ G       +W + + +E+ +         GLG ++           V  G+L++   
Sbjct: 217 FLGGLKQGWAFSWRSLMAAELIATSPDLGE--GLGQFLHNGMSLSDISMVFAGILLIFVV 274

Query: 566 VLALNRFLWHPL 577
            + +   ++ PL
Sbjct: 275 GVGIELLVFRPL 286


>gi|284044853|ref|YP_003395193.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949074|gb|ADB51818.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 275

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 96/232 (41%), Gaps = 17/232 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P ++       L+   L +    +  R L  ++I  +   V   +   S+    +
Sbjct: 32  RTLASPVELSKTAWDLLESGQLTEALGVSLRRALLGLLIGSVAGVVLGVVVGLSKLGDAI 91

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P +  +++IP+ G +   +++F      KV+         I    V  +  ++  +L 
Sbjct: 92  VDPPMQAIRTIPLFGLVPLFILWFGIGETPKVL--------LIALGVVIPLYLNIVAALR 143

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +I  +L EV+RS RL+ W++  ++ VP ++PG +     S+   W  ++ +E I  G   
Sbjct: 144 SIDPELIEVARSLRLTRWERARHVIVPGALPGTLVGFRQSLGIAWLALIVAEQIAAGA-- 201

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
               G+G  I  A        I+  +L    +  L D   + L R  + W +
Sbjct: 202 ----GLGYMINNARDFLRTDVIVVGLLCYAALGLLTDSIVRALERRALRWRD 249



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +     +++ R ++ ++I S+  + +G+ +G      + + P  Q +   P     
Sbjct: 49  ESGQLTEALGVSLRRALLGLLIGSVAGVVLGVVVGLSKLGDAIVDPPMQAIRTIPLFGLV 108

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +               LL+  G    +  N++A   +   +  EVA S  +T W   
Sbjct: 109 PLFILWFGIGET----PKVLLIALGVVIPLYLNIVAALRSIDPELIEVARSLRLTRWERA 164

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++I+PG  P  + G   + G AW A IV+E  + G       GLG  I  + +      
Sbjct: 165 RHVIVPGALPGTLVGFRQSLGIAWLALIVAEQIAAG------AGLGYMINNARDFLRTDV 218

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G+L      L  +  +
Sbjct: 219 IVVGLLCYAALGLLTDSIV 237


>gi|229110368|ref|ZP_04239940.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock1-15]
 gi|228673108|gb|EEL28380.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock1-15]
          Length = 282

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEAKFLRWRDNFKGET 280



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|264676684|ref|YP_003276590.1| ABC transporter [Comamonas testosteroni CNB-2]
 gi|262207196|gb|ACY31294.1| ABC transporter membrane subunit [Comamonas testosteroni CNB-2]
          Length = 285

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 10/209 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   +       ++     +  R    + +  ++ + + +  G      + I    Q+  
Sbjct: 73  LRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALVAGLSRSGEALIDGLVQIKR 132

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL +  +             L+       I  N  A   +      E+A + 
Sbjct: 133 AVPTLALIPLAIIWLGIGEA----MKVFLIFTAVLIPIYINTHAALRSIDIGHVELAQTL 188

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++   + R + LPG  P +  G   A    W A +V E+ +        TG+G  +  +
Sbjct: 189 GLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELIN------TQTGIGYLMNRA 242

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            + G    +V+G+LI     L  +  +  
Sbjct: 243 RDWGQTDVIVVGILIYALLGLLSDAAVRR 271



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 102/257 (39%), Gaps = 17/257 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVL--VIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQY 64
           P  +  R+ P +      +L  V    + L +   ET T P   +          SL  +
Sbjct: 29  PALVPARLSPGMLLAGPALLLLVWEAASRLGYLSSETLTAPSQALRTGYEMALDGSLLPH 88

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R  + + + ++   + A +A  SR    ++  ++ I +++P L  +   +++  
Sbjct: 89  LLASAGRAYTGLFLGIVVGVLLALVAGLSRSGEALIDGLVQIKRAVPTLALIPLAIIWLG 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +F IFT+ +  +  + + +L +I     E++++  LS  +    + 
Sbjct: 149 IG--------EAMKVFLIFTAVLIPIYINTHAALRSIDIGHVELAQTLGLSRAEFIRKVA 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++PG    + M++S  W  +V  E+I          GIG  +  A        I+  
Sbjct: 201 LPGALPGFFVGLRMAVSLCWTALVVLELI------NTQTGIGYLMNRARDWGQTDVIVVG 254

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L    +  L D  + R
Sbjct: 255 ILIYALLGLLSDAAVRR 271


>gi|261404675|ref|YP_003240916.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261281138|gb|ACX63109.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 298

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 93/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +++  ++  L +  +     P  I +          L  +   + +R  +   +   
Sbjct: 59  VSLLVLWQVLGDLGYISELLFPTPLRIAEAFAHLAGSGDLGGHVRISLVRAAAGFALGGA 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L    R    VL P + +++ IP L      V++F           E + I  
Sbjct: 119 LGLAFGILVGVFRISERVLDPSIQMVRMIPHLAVAPLFVLWFGIG--------ESSKILL 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +    Y  +  +     EV+R    +  Q+ + L +P S+P +   + +S+ 
Sbjct: 171 IAKGAFFPLYIQTYLGIRGVDNKWFEVTRVLGFTRIQQIFKLVIPSSLPHIFLGIRLSLG 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  +  A +      +   ++    +    D   +L
Sbjct: 231 LAWLGLVVAEIMG------STSGIGYLMTDARQFSKTATVFVCIVLFAVIGKAADAAVRL 284

Query: 259 LFRPMIVWSNKFR 271
           + R ++ W++ + 
Sbjct: 285 MERRLLKWNDSYE 297



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 86/289 (29%), Gaps = 25/289 (8%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+  +   +       R             ++            V  + +      +GY
Sbjct: 14  APVHGSESLVPEPAAGQRQRLSPGEAGAGIWRKSLGTFAAGAVLPVSLLVLWQVLGDLGY 73

Query: 367 IVNHFTY------------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           I                       +     I++ R      +   + +  GI +G     
Sbjct: 74  ISELLFPTPLRIAEAFAHLAGSGDLGGHVRISLVRAAAGFALGGALGLAFGILVGVFRIS 133

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  Q++   P     PL V        +      LL+  G  + +      G   
Sbjct: 134 ERVLDPSIQMVRMIPHLAVAPLFVLWFGIGESSK----ILLIAKGAFFPLYIQTYLGIRG 189

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             N + EV      T  +    +++P   P+   G   + G AW   +V+E+        
Sbjct: 190 VDNKWFEVTRVLGFTRIQQIFKLVIPSSLPHIFLGIRLSLGLAWLGLVVAEIMG------ 243

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            T+G+G  + ++ +      V + +++      A +   R +   L  +
Sbjct: 244 STSGIGYLMTDARQFSKTATVFVCIVLFAVIGKAADAAVRLMERRLLKW 292


>gi|154243924|ref|YP_001409497.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154163046|gb|ABS70261.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 257

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   +++ RV+   + A I  IP+GI +G        ++   +     P   + P+    
Sbjct: 59  WNLWVSLVRVMYGFLWALITGIPLGILLGLSARTYGWLKVIVEPARFVPPLAWVPVATIF 118

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                L+ N   + ++  G  + IL   + G         EV  +     W+    I+LP
Sbjct: 119 -----LSGNARYTFIIWLGAFFPILLASMGGVHNVERSLWEVGETLGGNRWQLVWKIVLP 173

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P    GA    G  W   + +E+     +     G+G+ I    E      V++G++
Sbjct: 174 SSAPTIAAGARLGLGIGWACIVAAEMIGGASV-----GIGSMIYNYGELIRVDAVIVGII 228

Query: 561 IMCCFVLALNRFL 573
            +      LN   
Sbjct: 229 AIGFLGYFLNEVF 241



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 82/208 (39%), Gaps = 17/208 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R++   + +L+       L   S R    L  I++  + +P L ++    ++     
Sbjct: 64  SLVRVMYGFLWALITGIPLGILLGLSARTYGWLKVIVEPARFVPPLAWVPVATIFLSGNA 123

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                       F I+    + +  +    + N+ R L EV  +   + WQ  W + +P 
Sbjct: 124 RYT---------FIIWLGAFFPILLASMGGVHNVERSLWEVGETLGGNRWQLVWKIVLPS 174

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S P +     + +  GW  +VA+EMI          GIGS I    +   + A++  ++ 
Sbjct: 175 SAPTIAAGARLGLGIGWACIVAAEMIGGASV-----GIGSMIYNYGELIRVDAVIVGIIA 229

Query: 248 MLGVIFLYDQLLF---RPMIVWSNKFRL 272
           +  + +  +++     R +  W    +L
Sbjct: 230 IGFLGYFLNEVFLAFERYLFPWQKSIKL 257


>gi|218233182|ref|YP_002367638.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus B4264]
 gi|218161139|gb|ACK61131.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus B4264]
          Length = 282

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGET 280



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|163737860|ref|ZP_02145276.1| glycine betaine/L-proline transport system permease, putative
           [Phaeobacter gallaeciensis BS107]
 gi|161388476|gb|EDQ12829.1| glycine betaine/L-proline transport system permease, putative
           [Phaeobacter gallaeciensis BS107]
          Length = 516

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + +LL  +                + +    + A  T   + +A  +S+L     
Sbjct: 294 IVIASLIVLLTWLTAGIRAAIYSGAFLAYMGLLGFWEGAMTTLALLGTAACLSILIGIPL 353

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+  R    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 354 GMFAARRPRFYAFIQPIMDFMQTMPAFVFMVPVIAFFGVGKP--------AAVVVTMIFG 405

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 406 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLAM 465

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 466 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 511



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 100/280 (35%), Gaps = 26/280 (9%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F+ +   +S  FF  L+  ++ L   L VI    P                 +    +V 
Sbjct: 258 FIAWCVRNSETFFDWLTFGIRALLDALEVILVQTP---------------WIVIASLIVL 302

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +    ++  Y      Y  +L        T+  +     ++ +I IP+G++   RP 
Sbjct: 303 LTWLTAGIRAAIYSGAFLAYMGLLGFWEGAMTTLALLGTAACLSILIGIPLGMFAARRPR 362

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + IQP    +   PA VF    V  ++++ +     + + MIFG    ++   + G  
Sbjct: 363 FYAFIQPIMDFMQTMPAFVFM---VPVIAFFGVGKPAAVVVTMIFGGT-PVVRLTVLGLR 418

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P   +E A SF    W     + LP   P    G       +    +V+ +       
Sbjct: 419 GVPESVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLAMVVVASLIG----- 473

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 474 --AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 511


>gi|159185903|ref|NP_356821.2| ABC transporter, membrane spanning protein (proline/glycine
           betaine) [Agrobacterium tumefaciens str. C58]
 gi|159141037|gb|AAK89606.2| ABC transporter, membrane spanning protein (proline/glycine
           betaine) [Agrobacterium tumefaciens str. C58]
          Length = 285

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 93/231 (40%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +  +L     +      +V ++   +    L     +T   ML A +IS++      
Sbjct: 55  IFLVFLVLAWFAAKKISLVIMVAVMLFIVGALGLWDLTMQTLALMLIASLISIVIGVPIG 114

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L AKS     + +PILD+MQ++P   +L   ++ F           ++ A+ A      
Sbjct: 115 ILLAKSEWARRITLPILDVMQTMPSFVYLIPAIMLFGLG--------KVPAVLATIVYAA 166

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +       +  + R++ E + +F  S  Q  + + +P + P ++  +  ++      V
Sbjct: 167 PPLIRLTDLGIRQVDREVVEAATAFGGSPRQILFGVELPLATPTIMAGLNQTIMMALSMV 226

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G  +   I+  D+   L A L ++ +  + D++
Sbjct: 227 VVASMI-------GARGLGEQVLNGIQTLDVGKGLEAGLGIVILAIVLDRI 270



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 74/239 (30%), Gaps = 11/239 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           +    R      IF   +V           +  +         L +  L   T+  +++ 
Sbjct: 43  VEWALRGLPWWAIFLVFLVLAWFAAKKISLVIMVAVMLFIVGALGLWDLTMQTLALMLIA 102

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +I+ +I +P+GI +           P   ++   P+ V+    +           +   
Sbjct: 103 SLISIVIGVPIGILLAKSEWARRITLPILDVMQTMPSFVYLIPAIMLFGLG----KVPAV 158

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L  I      ++     G      +  E A++F  +  +    + LP   P  + G    
Sbjct: 159 LATIVYAAPPLIRLTDLGIRQVDREVVEAATAFGGSPRQILFGVELPLATPTIMAGLNQT 218

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              A +  +V+ +           GLG  +    +     + +   L +    + L+R 
Sbjct: 219 IMMALSMVVVASMIG-------ARGLGEQVLNGIQTLDVGKGLEAGLGIVILAIVLDRI 270


>gi|238023929|ref|YP_002908161.1| choline ABC transporter membrane-spanning permease [Burkholderia
           glumae BGR1]
 gi|237878594|gb|ACR30926.1| ABC transporter membrane-spanning permease - choline transporter
           [Burkholderia glumae BGR1]
          Length = 297

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVIS 79
            L A  + + +   +  G+        I   + + L   +        T    LS+ +IS
Sbjct: 43  GLQAIPMWLLMAIFIGIGLWRVGWRFAIFTTLSLLLIFATGFWDQTVVTLGLTLSSTIIS 102

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+        AAKS+ +  ++ PILD+MQ++P   +L    + F     G+V G     I
Sbjct: 103 LVLGIPLGVWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLFGL---GRVPGILSTVI 159

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+  +            + ++ R++ E  ++F  + WQ  + +  P ++P ++  +  +
Sbjct: 160 FAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQT 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      V+ + M+  G       G+G+ +  +I+  D+     + L+++ +  + D++
Sbjct: 215 IMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 93/274 (33%), Gaps = 18/274 (6%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQS 363
             PL + V +  R L        +   ++  +    V + L      ++  + IGI    
Sbjct: 4   LIPLGSWVDQSVRYLLDHDAKTFDAIGRVIESLAALVEHGLQAIPMWLLMAIFIGIGLWR 63

Query: 364 IGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +G+    FT   +L +   G      +T+   +   II+ ++ IP+G+W      +S+ +
Sbjct: 64  VGWRFAIFTTLSLLLIFATGFWDQTVVTLGLTLSSTIISLVLGIPLGVWAAKSKWVSAIV 123

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P   L+   PA V+            +   L   +  +             G      +
Sbjct: 124 RPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGIRHVNRE 179

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E   +F  T W+    +  P   P  + G       A +  I++ +   G       G
Sbjct: 180 IVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-------G 232

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           LG  +  S ++          L +    + L+R 
Sbjct: 233 LGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|224824410|ref|ZP_03697518.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224603829|gb|EEG10004.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 290

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T    LSA +ISL+         A+S+R+  ++ P+LD MQ++P   +L    ++F 
Sbjct: 99  TVSTLALTLSATLISLMIGIPTGIWCARSKRVNTLVRPVLDFMQTMPAFVYLIPAAMFFG 158

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V G     +FA+  +            +  + ++  E   +F  +  Q  + + 
Sbjct: 159 L---GRVPGILATVVFAVPPA-----VRLTSLGIRQVNKEQVEAGHAFGCTSTQLLFKVQ 210

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     +
Sbjct: 211 LPIALPAIMAGVNQTIMMALSMVIIASMVGAG-------GLGNDVLSSIQRLDVGLGFES 263

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D+L
Sbjct: 264 GLAVVLLAIILDRL 277



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 11/227 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +     +      + W+  G+++                 T+   +   +I+ +I IP G
Sbjct: 62  LIMGFFIGLGVWRLGWRFAGFVLAALALIFGTGFWPQTVSTLALTLSATLISLMIGIPTG 121

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           IW      +++ ++P    +   PA V+            +   L   +          +
Sbjct: 122 IWCARSKRVNTLVRPVLDFMQTMPAFVYLIPAAMFFGLGRVPGILATVVF----AVPPAV 177

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E   +F  T  +    + LP   P  + G       A +  I++ 
Sbjct: 178 RLTSLGIRQVNKEQVEAGHAFGCTSTQLLFKVQLPIALPAIMAGVNQTIMMALSMVIIAS 237

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 238 MVGAG-------GLGNDVLSSIQRLDVGLGFESGLAVVLLAIILDRL 277


>gi|306845830|ref|ZP_07478398.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306273722|gb|EFM55560.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 272

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGIGSYILEAGSLYDLEKLFAGVTILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQYASR 67
             P+    +   + + +I     G +           P  +++          L Q+   
Sbjct: 23  FAPSPVRGIGLAVFVVLIVAAEIGTRSGFISNLTLPRPSAVLETFGQLWQTGMLWQHLLP 82

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R++    + +        +      +   LVP++  +  IP +  L   V++F    
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGID- 141

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E++    I          + Y ++ N+ R L  + +SF LS W     + +P 
Sbjct: 142 -------EMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPG 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  + +S+S     +VA+EM+          GIGSYI  A    DL  +   +  
Sbjct: 195 AFPAILSGLRVSISIAIILLVAAEMLG------AQYGIGSYILEAGSLYDLEKLFAGVTI 248

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  +  + + ++    R  + W
Sbjct: 249 LSVMGLIVNVVIGWVERRFLNW 270


>gi|228940034|ref|ZP_04102608.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228972929|ref|ZP_04133524.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228979512|ref|ZP_04139842.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis Bt407]
 gi|228780209|gb|EEM28446.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis Bt407]
 gi|228786802|gb|EEM34786.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819646|gb|EEM65697.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326940687|gb|AEA16583.1| alkanesulfonate ABC transporter permease [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 282

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGET 280



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|167031338|ref|YP_001666569.1| choline ABC transporter permease [Pseudomonas putida GB-1]
 gi|166857826|gb|ABY96233.1| choline ABC transporter, permease protein [Pseudomonas putida GB-1]
          Length = 281

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 97/244 (39%), Gaps = 18/244 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+    + +   +  L+      TV   +  ++ + L      Q    T  ++  A V+
Sbjct: 48  WFNPFVLIALFAALAHLIQRKWALTVFVALSFLLILNL---GYWQETMETLAQVTFATVV 104

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++       LAA        + P+LD+MQ++P   +L  T+  F     G V G     
Sbjct: 105 CVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTV 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FAI            Y  +C++P++L +  ++F  S  Q    + +P +MP +   +  
Sbjct: 162 VFAIAAP-----IRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQ 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + ++          G+G  +  A+   D+     A L ++ +  + D++
Sbjct: 217 CIMLSLSMVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRI 269

Query: 259 LFRP 262
             +P
Sbjct: 270 CKQP 273



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +          I   W    ++   F     L        T+ +V    ++  +I +P
Sbjct: 52  FVLIALFAALAHLIQRKWALTVFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + ++P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 112 LGILAAHKPMFYTAMRPVLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 169 IRL-TYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 228 AALVG-------ADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|51892790|ref|YP_075481.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51856479|dbj|BAD40637.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 255

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 91/217 (41%), Gaps = 10/217 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++      +   SL ++   T   +L+ M I +L  F    LA   R    +L+ 
Sbjct: 33  PAPSRVLLAFGEYIRDGSLLRHTLHTLQMVLTGMSIGILTAFCLTALATAGRWGRDLLLT 92

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  IM  +P +  L   +++              + +F I  S VW++  +M+     +P
Sbjct: 93  LTTIMNPLPAIALLPVALLWLGIG--------PRSLVFVIANSVVWSLALNMHTGFETVP 144

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +  ++  L GW    ++ +P ++P ++  + ++ S GW  V+A+E++         
Sbjct: 145 LTWRQAGQNLGLRGWGLIRHVYLPAALPYILTGVKIAWSFGWRTVIAAELVFGASGQ--A 202

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I +     +   +   ++T++ +  L + L 
Sbjct: 203 GGLGWMINVERYNLNTAGVFCGLVTIVALGLLAEALF 239



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 6/197 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     T+  V+  + I  +    +             +     ++   PA    P+
Sbjct: 49  GSLLRHTLHTLQMVLTGMSIGILTAFCLTALATAGRWGRDLLLTLTTIMNPLPAIALLPV 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +     +    L  ++     W +  N+  G    P  +++   +  + GW   R+
Sbjct: 109 ALLWLGIGPRS----LVFVIANSVVWSLALNMHTGFETVPLTWRQAGQNLGLRGWGLIRH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   PY +TG   A    W   I +E+        +  GLG  I       +   V 
Sbjct: 165 VYLPAALPYILTGVKIAWSFGWRTVIAAELVFGA--SGQAGGLGWMINVERYNLNTAGVF 222

Query: 557 LGVLIMCCFVLALNRFL 573
            G++ +    L      
Sbjct: 223 CGLVTIVALGLLAEALF 239


>gi|149376431|ref|ZP_01894193.1| glycine betaine/proline ABC transporter, permease protein
           [Marinobacter algicola DG893]
 gi|149359272|gb|EDM47734.1| glycine betaine/proline ABC transporter, permease protein
           [Marinobacter algicola DG893]
          Length = 344

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           QYA  T   +     + +L         ++S  +  + +P+LD++Q++P   +L   +  
Sbjct: 149 QYAMETLSIIFVCAFLCVLLGVPIGIAMSRSDMMQRLTIPVLDMLQTLPPFVYLIPLIFL 208

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F                 AI    +  +       +  + +D+ E + +F ++  QK + 
Sbjct: 209 FSVTESKLYG-------IAIILYAIVPVIRLTNLGIRLVDKDVIEAADAFGMTSQQKLFK 261

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L
Sbjct: 262 VQIPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLQGIRNLELGVGL 314

Query: 243 YAMLTMLGVIFLYDQL 258
            A L ++ +  + D++
Sbjct: 315 VAGLGIVILAVILDRV 330



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 10/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    +    +     +  +W+ +G++         +        T+  + V   +  ++
Sbjct: 109 TPWWIVIPALLAVVFVVTKSWKLVGFVAGSLILLAFIDYYQYAMETLSIIFVCAFLCVLL 168

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     +     P   +L   P  V+    +  +  + +  +    + +I   
Sbjct: 169 GVPIGIAMSRSDMMQRLTIPVLDMLQTLPPFVYL---IPLIFLFSVTESKLYGIAIILYA 225

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      D  E A +F +T  +    + +P   P  + G       +   
Sbjct: 226 IVPVIRLTNLGIRLVDKDVIEAADAFGMTSQQKLFKVQIPLALPNIMAGVNQTIMMSLAM 285

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ + S         GLG  + +          ++  L +    + L+R
Sbjct: 286 VVIASLVS-------APGLGVLVLQGIRNLELGVGLVAGLGIVILAVILDR 329


>gi|134301039|ref|YP_001114535.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134053739|gb|ABO51710.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 278

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 83/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   +L+A +IS++       L A+      +++P+LD MQ++P   +L   + 
Sbjct: 88  WENTMETLALVLTAALISIIVGIPTGILCARKDTARDLVMPLLDFMQTMPAFVYLIPAIF 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     GKV G   + IFA+               +  +P +L E + +F  +  QK  
Sbjct: 148 FFGL---GKVPGVIASVIFAMP-----PTIRLTNLGIRQVPAELIEAADAFGSTPTQKLL 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +   +      VV + MI          G+G+ +  A+ +  +   
Sbjct: 200 KVQLPLAKQTIMAGINQCIMLALSMVVIASMI-------GAKGLGADVYRAVTQIKIGVG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ +  + D++
Sbjct: 253 FEAGLAIVVLAIILDRM 269



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 77/237 (32%), Gaps = 16/237 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLII 395
           S++ +     V   +   +AW+     +  FT   +L +  LG       T+  V+   +
Sbjct: 44  SFLFNGVPAGVFIPILTLLAWKFSKRSIALFTLAGLLLISNLGYWENTMETLALVLTAAL 103

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ I+ IP GI    +      + P    +   PA V+    +       +   +   + 
Sbjct: 104 ISIIVGIPTGILCARKDTARDLVMPLLDFMQTMPAFVYLIPAIFFFGLGKVPGVIASVIF 163

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                    +     G    P +  E A +F  T  +    + LP      + G      
Sbjct: 164 ----AMPPTIRLTNLGIRQVPAELIEAADAFGSTPTQKLLKVQLPLAKQTIMAGINQCIM 219

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ +           GLGA +  +  +          L +    + L+R 
Sbjct: 220 LALSMVVIASMIG-------AKGLGADVYRAVTQIKIGVGFEAGLAIVVLAIILDRM 269


>gi|258542462|ref|YP_003187895.1| aliphatic sulfonates transporter permease [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633540|dbj|BAH99515.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636599|dbj|BAI02568.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639652|dbj|BAI05614.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642708|dbj|BAI08663.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645763|dbj|BAI11711.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648816|dbj|BAI14757.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651869|dbj|BAI17803.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654860|dbj|BAI20787.1| aliphatic sulfonates transporter permease protein [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 258

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 83/233 (35%), Gaps = 12/233 (5%)

Query: 343 MLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +L   W  V     I   +    +  +    T      +     +++ R    + +A I+
Sbjct: 17  LLVAIWQGVCSAGLISPHVLASPVAVVRTAETLVRDGTLPKNLMVSLVRAASGLSLAVIM 76

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + + +  G        +    Q+    PA    PL +               LL+ FG 
Sbjct: 77  GVVLALISGLSRMGEEVVDGPMQIFRTLPALALVPLFILWFGIGETPK----ILLVAFGA 132

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I  N+  G         E+  +  ++  +  R IILP   P ++ G   A G +W  
Sbjct: 133 AFPIYLNLHKGIRGVDVRLLEMGKTLGLSHSQVVRDIILPSALPDFIVGLRFAVGISWLM 192

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +V+E  +        +G+G  + ++ +      +++G+ +     L  ++ +
Sbjct: 193 LVVAEQVN------AESGIGHMMMDAEDFLRTDVILVGLAVYGFLGLMSDQIV 239



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 100/252 (39%), Gaps = 18/252 (7%)

Query: 20  FDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           F L+  V +  G+ +  L        P  +V      +   +LP+    + +R  S + +
Sbjct: 13  FSLILLVAIWQGVCSAGLISPHVLASPVAVVRTAETLVRDGTLPKNLMVSLVRAASGLSL 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   V A ++  SR    V+   + I +++P L  +   +++F      K        
Sbjct: 73  AVIMGVVLALISGLSRMGEEVVDGPMQIFRTLPALALVPLFILWFGIGETPK-------- 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +     + +  ++++ +  +   L E+ ++  LS  Q    + +P ++P  +  +  
Sbjct: 125 ILLVAFGAAFPIYLNLHKGIRGVDVRLLEMGKTLGLSHSQVVRDIILPSALPDFIVGLRF 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W  +V +E +          GIG  +  A        IL  +     +  + DQ+
Sbjct: 185 AVGISWLMLVVAEQV------NAESGIGHMMMDAEDFLRTDVILVGLAVYGFLGLMSDQI 238

Query: 259 ---LFRPMIVWS 267
              + R  ++WS
Sbjct: 239 VRYVERFFLIWS 250


>gi|70729921|ref|YP_259660.1| glycine betaine/L-proline ABC transporter ATPase/permease fusion
           protein [Pseudomonas fluorescens Pf-5]
 gi|68344220|gb|AAY91826.1| glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 690

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 87/232 (37%), Gaps = 15/232 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V  +  +LL                 + + +    +    T   + S+++ISLL      
Sbjct: 460 VPALALVLLAWRSAGAALALTSAAALLYIGLFGFWERTIATLALVGSSVLISLLIGVPAG 519

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L AK      ++ P+LD+MQ++P   +L   V +F     GK        IFA+     
Sbjct: 520 ILLAKRALARRLITPLLDVMQTLPTFVYLIPAVAFFSV---GKTPAVIATVIFALA---- 572

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             M       +  +P+   E + +   + WQ    + +P +   L+  +  ++      V
Sbjct: 573 -PMIRLTALGIQEVPKTAVEAALAHGATPWQILTKVELPLAAGSLLLGINQTLVMSLSMV 631

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V + +I  G       G+G  +  A++       + A   ++    + D+++
Sbjct: 632 VVAALIGAG-------GLGYDVMTALRNIKGGEGMLAGAAIVFCALIPDRII 676



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 16/236 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    + V     + +AW+S G  +   +   +LY+   G       T+  V   ++I+
Sbjct: 452 LLGWLPWPVPALALVLLAWRSAGAALALTSAAALLYIGLFGFWERTIATLALVGSSVLIS 511

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P GI +  R      I P   ++   P  V+    V+  S       +   +  +
Sbjct: 512 LLIGVPAGILLAKRALARRLITPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFAL 571

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G    P    E A +   T W+    + LP      + G       +
Sbjct: 572 A----PMIRLTALGIQEVPKTAVEAALAHGATPWQILTKVELPLAAGSLLLGINQTLVMS 627

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +  +V+ +   G       GLG  +  +       E +L    +    L  +R +
Sbjct: 628 LSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGMLAGAAIVFCALIPDRII 676


>gi|146337666|ref|YP_001202714.1| putative sulfonate ABC transporter permease (ssuC/ycbM-like)
           [Bradyrhizobium sp. ORS278]
 gi|146190472|emb|CAL74471.1| putative sulfonate ABC transporter, permease protein
           (ssuC/ycbM-like) [Bradyrhizobium sp. ORS278]
          Length = 282

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 90/238 (37%), Gaps = 17/238 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +   +        L ++ + T  R+     + +    +   +         ++ P
Sbjct: 59  PPPSKVFTTIAELARSGELSRHIAATLSRVGIGFGLGVAAGTLLGGICGYWSLARRLVDP 118

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  +++IP + ++   +++       KV    +   F ++          +  ++ ++ 
Sbjct: 119 TIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------LGLTGAILSVD 170

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R + EV R FRLSG      + +P  +P  V  + + +  GW FVVA+E +   +     
Sbjct: 171 RKIVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAAEFMGASE----- 225

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277
            G+G  +    +      I+ A++    +    D LL     P++ W + F  +    
Sbjct: 226 -GLGYLLIDGQQLGKPAQIVAAIVIFAVIGKATDWLLEIATAPLLRWQDSFARQSGAA 282



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ RV +   +       +G   G+       + P  Q L A P+  + PL +  +  
Sbjct: 82  AATLSRVGIGFGLGVAAGTLLGGICGYWSLARRLVDPTIQALRAIPSIAWVPLFILWLGI 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +  +       L+  G  + +   +     +      EV   F ++G    R I+LP + 
Sbjct: 142 FETSK----VALIAVGVFFPVYLGLTGAILSVDRKIVEVGRVFRLSGPAMIRRILLPAVL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P YV       G  W   + +E          + GLG  + +  + G   ++V  ++I  
Sbjct: 198 PAYVVALRVGLGLGWMFVVAAEFMG------ASEGLGYLLIDGQQLGKPAQIVAAIVIFA 251

Query: 564 CFVLALNRFL 573
               A +  L
Sbjct: 252 VIGKATDWLL 261


>gi|328885958|emb|CCA59197.1| ABC-type probable sulfate transporter, permease protein
           [Streptomyces venezuelae ATCC 10712]
          Length = 295

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 101/255 (39%), Gaps = 11/255 (4%)

Query: 13  RRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P    ++  + V   +++  +    +   P  + D +       +L +    +  R
Sbjct: 41  KKVLPPTLAVVLVLAVWQILVSAKVTDETKLPAPSAVWDGLTDMWLQGTLLEVIWTSVSR 100

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L+  +++L        L A+ + +   + PIL  +QS+P + ++   V++F        
Sbjct: 101 GLAGFLLALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVLWFGLNDAMMY 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 161 T--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWFVTLPAALPG 212

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I     +      G  +       DL  +  A+L +L V
Sbjct: 213 YLAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNIDLPGVFLAILLILVV 270

Query: 252 IFLYDQLLFRPMIVW 266
               D L+F P+  W
Sbjct: 271 GIAIDLLIFSPLERW 285



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   ++A  I  P+G+ +     + + I P    L + P+  + P  V       
Sbjct: 97  SVSRGLAGFLLALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVLWFGL-- 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    I   +++G    P  F     +   TG +   ++ LP   P 
Sbjct: 155 --NDAMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWFVTLPAALPG 212

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +         G    +         P V L +L++   
Sbjct: 213 YLAGLKQGWAFSWRSLMAAEIIASSPDLGLGLG--QLLENGRNNIDLPGVFLAILLILVV 270

Query: 566 VLALNRFLWHPLYLYGTR 583
            +A++  ++ PL  +  R
Sbjct: 271 GIAIDLLIFSPLERWVLR 288


>gi|281358476|ref|ZP_06244957.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281315099|gb|EFA99131.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 279

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 95/236 (40%), Gaps = 17/236 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L+   +  ++ G ++         ++ + +    L + A  T   ++     ++   
Sbjct: 50  AMLLIFCTVIFVVSGHRKLLTSGSACGMMLVIM--LGLWEPAMETMALVIICTAAAVAIG 107

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L   S RL  V++P+LDIMQ++P   +L   + +F          +  A +FA  
Sbjct: 108 LPLAVLMTFSGRLKKVVLPLLDIMQTMPAYVYLVPAIAFFSI--------SNTAGVFATV 159

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       + N P+DL E S +F  +   + + L +P ++  +   +  ++   
Sbjct: 160 VFALPPIVRMTVLGIENTPKDLLECSEAFGATPMNRLFDLELPTALTSIRAGLNQTVMLA 219

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              VV + ++          G+GS +  AI   +        L ++ +  + D+ L
Sbjct: 220 LSMVVIASLV-------GAQGVGSVVWGAICNGEKGTAFEGGLVIVVIAIILDRTL 268



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 16/231 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWI 402
           W  ++    +         ++   +   ++ VI LG       TM  V++    A  I +
Sbjct: 49  WAMLLIFCTVIFVVSGHRKLLTSGSACGMMLVIMLGLWEPAMETMALVIICTAAAVAIGL 108

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+ + + F   +   + P   ++   PA V+    V  ++++ ++    +   ++F    
Sbjct: 109 PLAVLMTFSGRLKKVVLPLLDIMQTMPAYVYL---VPAIAFFSISNTAGVFATVVF-ALP 164

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+   + G    P D  E + +F  T       + LP        G       A +  +
Sbjct: 165 PIVRMTVLGIENTPKDLLECSEAFGATPMNRLFDLELPTALTSIRAGLNQTVMLALSMVV 224

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +           G+G+ +  +   G       G L++    + L+R L
Sbjct: 225 IASLVG-------AQGVGSVVWGAICNGEKGTAFEGGLVIVVIAIILDRTL 268


>gi|218658494|ref|ZP_03514424.1| aliphatic sulfonate ABC transporter permease [Rhizobium etli
           IE4771]
          Length = 287

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R       A ++ IP+G+++G    +   + P  QL     A   +P+ +  +  
Sbjct: 89  AISLQRSGTAFAFAVVVGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++ + T + +L   I G         E+A ++       +R +ILP   
Sbjct: 149 GETSK----IFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGSLTVFRRVILPASV 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P    G   +   A    I +E+           G+G  +  +      P + 
Sbjct: 205 PAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQVMNAQYNFQIPLMF 251



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73
           + P    L+AF+++    +           P ++ +  +   L   +L    + +  R  
Sbjct: 37  LLPRYGLLIAFLVLWQASSTRGWINPAIFPPLNVILSALWTNLANGALLDDIAISLQRSG 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   +++          + R +   L PIL + +    L      ++            
Sbjct: 97  TAFAFAVVVGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGLG------- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF IF + ++ +  +    +  + + L E++R++       F  + +P S+P + 
Sbjct: 150 -ETSKIFVIFWATLFPVLLATIGGVKEVDKKLIEMARTYGAGSLTVFRRVILPASVPAIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             + +S +     ++A+EMI          GIG  +  A     +  + 
Sbjct: 209 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 251


>gi|168185827|ref|ZP_02620462.1| proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           botulinum C str. Eklund]
 gi|169295930|gb|EDS78063.1| proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           botulinum C str. Eklund]
          Length = 528

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 82/197 (41%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     L+++V+++L       L ++ R+L   ++ + +++Q++P L  L F +    
Sbjct: 19  LLQHIGLTLASVVVAILIGVPLGILISRKRKLSGPIIGVANVIQAVPSLALLGFLIPILG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+F +F   +  +  + Y  L +I  D+ E +    L+  QK   + 
Sbjct: 79  IG--------STPAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPGQKLKMVQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  + ++       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLAMPIIMAGIRIA------AVTAVGLMTIAAF-IGAGGLGYMVFTGVQRVNNYMILAG 183

Query: 245 MLTMLGVIFLYDQLLFR 261
            +    +  L D +  R
Sbjct: 184 AIPSGILALLIDYISGR 200



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +++A +I +P+GI I  +  +S  I   A ++ A P+      ++  +       + 
Sbjct: 27  LASVVVAILIGVPLGILISRKRKLSGPIIGVANVIQAVPSLALLGFLIPILGIG----ST 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++   +   I+ N   G S+   D  E A    +T  +  + + LP   P  + G 
Sbjct: 83  PAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPGQKLKMVQLPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    ++ +   ++ G +      L ++
Sbjct: 143 RIAAVTAVGLMTIAAFIGAG-------GLGYMVFTGVQRVNNYMILAGAIPSGILALLID 195

Query: 571 RF 572
             
Sbjct: 196 YI 197


>gi|170734228|ref|YP_001766175.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169817470|gb|ACA92053.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 321

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 130 SAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 188 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 246 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 299

Query: 566 VLALNRFLWHPLYLYGTRC 584
               +  +      +  R 
Sbjct: 300 AWLFDLAM-----RWVERR 313



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 123 LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 182

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 183 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 234

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 235 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 288

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 289 VVMGILIIGAIAWLFDLAMRWVERRVVPWKGR 320


>gi|170726199|ref|YP_001760225.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella woodyi ATCC 51908]
 gi|169811546|gb|ACA86130.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella woodyi ATCC 51908]
          Length = 298

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 96/234 (41%), Gaps = 16/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            + ++I I  ++    +   +   +V    + +    + +   RT   +    +++++  
Sbjct: 62  WWAVLIVITAMVYLASRSWKLSLGVVVSFLL-IGYFGMWEDTMRTLSIITVCTLLAIILG 120

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  A+S R    + PILD+MQ++P   +L   V+       GKV G     I+AI 
Sbjct: 121 VPIGIFMARSDRTQSAVTPILDVMQTMPAFVYLIPVVMLLG---IGKVPGVIAVVIYAIP 177

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +       +  + +++ E + ++  +  Q+   + +P + P ++  +  ++   
Sbjct: 178 -----PVIRLTNLGIRLVDKEVLEAATAYGANKMQRLLGVQLPLAAPTIMAGINQTIMMA 232

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV + MI V        G+G  +  +I  Q     L+  L ++ +  ++D+
Sbjct: 233 LGMVVIASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 279



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S    +             +W+    +V  F       +      T+  + V  ++A I+
Sbjct: 60  SPWWAVLIVITAMVYLASRSWKLSLGVVVSFLLIGYFGMWEDTMRTLSIITVCTLLAIIL 119

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI++       S + P   ++   PA V+   VV  +        +   + ++   
Sbjct: 120 GVPIGIFMARSDRTQSAVTPILDVMQTMPAFVYLIPVVMLLGIG----KVPGVIAVVIYA 175

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A+++     +    + LP   P  + G       A   
Sbjct: 176 IPPVIRLTNLGIRLVDKEVLEAATAYGANKMQRLLGVQLPLAAPTIMAGINQTIMMALGM 235

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG  + +S     F   +   L +    +  +R
Sbjct: 236 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 279


>gi|54026310|ref|YP_120552.1| putative transporter [Nocardia farcinica IFM 10152]
 gi|54017818|dbj|BAD59188.1| putative transporter [Nocardia farcinica IFM 10152]
          Length = 284

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 71/233 (30%), Gaps = 10/233 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                L        ++ I W     G            +   +       +      +  
Sbjct: 33  RRATGLARKSAGLVLVLILWQLGARGWLGATTPAPTEVVAAGWDLISSGELWRHLAASAR 92

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV   + +   I + +G+  G        +    Q L   PA    P+ +          
Sbjct: 93  RVGTGLALGIGIGLVLGVAAGLFRLAEDLVNAPVQALRMMPALALLPVFIIWFGIGDS-- 150

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
             +   L+     + I  NV AG  +      E   S  +  +     IILPG  P    
Sbjct: 151 --FKIALIAVAPVFPIYLNVFAGIRSVDRRLVEAGESLGLNRFELTTRIILPGALPQIFV 208

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           G   A G  W A +V+E+           GLG  + ++ E     ++ L +++
Sbjct: 209 GLRQALGIGWLALVVAEM------QTTPVGLGFLMNDAKEFLRTDQIFLVLVV 255



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 95/252 (37%), Gaps = 17/252 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  VL++  +         T  P ++V      +    L ++ + +  R+ + + + +  
Sbjct: 45  LVLVLILWQLGARGWLGATTPAPTEVVAAGWDLISSGELWRHLAASARRVGTGLALGIGI 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V    A   R    ++   +  ++ +P L  L   +++F      K        I  I
Sbjct: 105 GLVLGVAAGLFRLAEDLVNAPVQALRMMPALALLPVFIIWFGIGDSFK--------IALI 156

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + V+ +  +++  + ++ R L E   S  L+ ++    + +P ++P +   +  ++  
Sbjct: 157 AVAPVFPIYLNVFAGIRSVDRRLVEAGESLGLNRFELTTRIILPGALPQIFVGLRQALGI 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
           GW  +V +EM           G+G  +  A +      I   ++    +  L D L+   
Sbjct: 217 GWLALVVAEM------QTTPVGLGFLMNDAKEFLRTDQIFLVLVVYALLGLLSDLLVRLL 270

Query: 261 -RPMIVWSNKFR 271
            R  + W   F 
Sbjct: 271 ERRFLAWRTGFE 282


>gi|148257597|ref|YP_001242182.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146409770|gb|ABQ38276.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 267

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +         +     I+  R     ++ ++  I +G+     P +++ + P  Q+  + 
Sbjct: 51  SSLELLQSGELAKHAAISARRAAGGFVVGALPAIVIGLLTARLPRLAAYVDPLLQMFRSI 110

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P  V        +       L+ +   + +  N  AG           A     
Sbjct: 111 PPLALVPFGVFWFGIGETSK----IALVAWSVFFPVWVNTEAGVREVSPLLVRAAFCLGA 166

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W+ + ++ LP   PY +TG   +   A +  + +E+A          GLG  +  S +
Sbjct: 167 KRWQMFFFVHLPAALPYIITGLKVSLSAAISTLVAAELAG------AVYGLGYLVQISQQ 220

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 + +G++ +    L +NR  
Sbjct: 221 VFRVDLMFVGLIALGMGSLIVNRVF 245



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 86/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       L    L ++A+ +  R     V+  L   V   L A+  RL   + 
Sbjct: 42  LPPPTDIFKSSLELLQSGELAKHAAISARRAAGGFVVGALPAIVIGLLTARLPRLAAYVD 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L + +SIP L  + F V +F      K+     +  F         +  +    +  +
Sbjct: 102 PLLQMFRSIPPLALVPFGVFWFGIGETSKIALVAWSVFF--------PVWVNTEAGVREV 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L   +       WQ F+++ +P ++P ++  + +S+S     +VA+E+         
Sbjct: 154 SPLLVRAAFCLGAKRWQMFFFVHLPAALPYIITGLKVSLSAAISTLVAAELAG------A 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + G+G  + ++ +   +  +   ++ +     + +++ 
Sbjct: 208 VYGLGYLVQISQQVFRVDLMFVGLIALGMGSLIVNRVF 245


>gi|325289129|ref|YP_004265310.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964530|gb|ADY55309.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 262

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 11/259 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           + +    IR    +    L      + ++  +      G    +   +   +V +     
Sbjct: 1   MLKKWFSIRKEIEKKHYLLLGVSSFAVIITAWTIASTGGFVNELFLPAPLDVVRNIVQGA 60

Query: 376 VLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           V   IW    I++ R+++  ++A  I IP+GI IG    + + +QP A+ +   P   F 
Sbjct: 61  VTGTIWPDMWISISRIMIGFLLAVAIGIPLGILIGTFKSVEAFLQPVAEFIRYMPVPAFI 120

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++  V             ++  G  + ++  V       P D      +   +  +  
Sbjct: 121 PLIMMWVGIGEN----AKIAVIFAGIFFQLILMVADDVRLVPGDLLNAGYTLGASNRQSI 176

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I++P + P  +       G AW    V+E+ +        +GLG  I ++        
Sbjct: 177 FKILIPAMMPKLMDTLRVLLGWAWTYVTVAELVA------ANSGLGYSILKAQRFLKTDS 230

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +  G+LI+    L  +R L
Sbjct: 231 IFAGILIIGLLGLIFDRLL 249



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 84/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V  +       ++      +  R++   ++++        L    + +   L 
Sbjct: 46  LPAPLDVVRNIVQGAVTGTIWPDMWISISRIMIGFLLAVAIGIPLGILIGTFKSVEAFLQ 105

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+ + ++ +P+  F+   +++            E A I  IF    + +   +   +  +
Sbjct: 106 PVAEFIRYMPVPAFIPLIMMWVGIG--------ENAKIAVIFAGIFFQLILMVADDVRLV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P DL     +   S  Q  + + +P  MP L+  + + +   W +V  +E++        
Sbjct: 158 PGDLLNAGYTLGASNRQSIFKILIPAMMPKLMDTLRVLLGWAWTYVTVAELVAANS---- 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +     +I   +L +  +  ++D+LL
Sbjct: 214 --GLGYSILKAQRFLKTDSIFAGILIIGLLGLIFDRLL 249


>gi|251799431|ref|YP_003014162.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547057|gb|ACT04076.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 296

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 94/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              +++  I     +        P  I+          +L  +   +  R     +I   
Sbjct: 57  AVLLVLWQIAASAGYISPMFMPSPASILQAFGTLATSENLLHHLLVSMGRAGLGFLIGGA 116

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  L    R+   +L P L +++ +P L      +++F           E + I  
Sbjct: 117 AGLLFGLLTGLFRKAQYLLDPSLQVLRLVPHLAIAPLIILWFG--------FGETSKIAI 168

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I +   + +  + +  + N+   L EVSR    S  ++   L +P ++P ++  + +S++
Sbjct: 169 IVSGSFFPLYINTFLGIRNVDNKLFEVSRILGFSPLKRLTRLILPAALPDILIGVRISLA 228

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
             W  +V +E+I          GIG  I  A +  +   I   ++    +  L D ++  
Sbjct: 229 VSWIGLVVAELIG------SRSGIGFLINEAKQNSETSVIFVGIIIFAVIGKLIDSIMKS 282

Query: 260 -FRPMIVWSNKFR 271
                + W + ++
Sbjct: 283 VEIRWLNWRDSYK 295



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 22/258 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
            +          +   + I        + +     S GYI   F       +   G +  
Sbjct: 33  RKRRWSTKLAAAILKDIAIGAAIPAVLLVLWQIAASAGYISPMFMPSPASILQAFGTLAT 92

Query: 388 FRVVVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFP 435
              ++  ++ S+    +G  IG                    + P  Q+L   P     P
Sbjct: 93  SENLLHHLLVSMGRAGLGFLIGGAAGLLFGLLTGLFRKAQYLLDPSLQVLRLVPHLAIAP 152

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++    +   +       +++ G+ + +  N   G     N   EV+     +  +   
Sbjct: 153 LIILWFGFGETSK----IAIIVSGSFFPLYINTFLGIRNVDNKLFEVSRILGFSPLKRLT 208

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP   P  + G   +   +W   +V+E+          +G+G  I E+ +      +
Sbjct: 209 RLILPAALPDILIGVRISLAVSWIGLVVAELIG------SRSGIGFLINEAKQNSETSVI 262

Query: 556 VLGVLIMCCFVLALNRFL 573
            +G++I       ++  +
Sbjct: 263 FVGIIIFAVIGKLIDSIM 280


>gi|167625948|ref|YP_001676242.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella halifaxensis HAW-EB4]
 gi|167355970|gb|ABZ78583.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella halifaxensis HAW-EB4]
          Length = 299

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 97/234 (41%), Gaps = 16/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            + +++ I  ++    +   +   +V    + +    + +   RT   +    ++++   
Sbjct: 63  WWAVLLCITTLVYFASRSWKLSLGVVISFLL-IGYFGMWEDTMRTLSIITVCTLLAITLG 121

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L ++S R   ++ PILD+MQ++P   +L   V+       GKV G     I+AI 
Sbjct: 122 VPIGILMSRSNRTQALVTPILDVMQTMPAFVYLIPVVMLLG---IGKVPGVIAVVIYAIP 178

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +       +  + +++ E + ++  +  Q+   + +P + P ++  +  ++   
Sbjct: 179 -----PVIRLTNLGIRLVDKEVLEAATAYGANRMQRLMGVQLPLASPTIMAGINQTIMMA 233

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV + MI V        G+G  +  +I  Q     L+  L ++ +  ++D+
Sbjct: 234 LGMVVIASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 73/231 (31%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S    +             +W+    +V  F       +      T+  + V  ++A  +
Sbjct: 61  SPWWAVLLCITTLVYFASRSWKLSLGVVISFLLIGYFGMWEDTMRTLSIITVCTLLAITL 120

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +       + + P   ++   PA V+   VV  +        +   + ++   
Sbjct: 121 GVPIGILMSRSNRTQALVTPILDVMQTMPAFVYLIPVVMLLGIG----KVPGVIAVVIYA 176

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A+++     +    + LP   P  + G       A   
Sbjct: 177 IPPVIRLTNLGIRLVDKEVLEAATAYGANRMQRLMGVQLPLASPTIMAGINQTIMMALGM 236

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG  + +S     F   +   L +    +  +R
Sbjct: 237 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280


>gi|307323829|ref|ZP_07603038.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306890278|gb|EFN21255.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 273

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 14/262 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            V++L RTL  +R   P   + L      ++    F             W S        
Sbjct: 9   TVRRLPRTLA-LRLGVPVVAVALWQLAARAHGNVFFPTPARIVEHGYHLWFSGPAGRAFL 67

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T   V  ++     ++ RV+    +A+++ I +G+ +G    + +   P  Q   A P  
Sbjct: 68  TDGAVRDLLP----SLGRVLAGFALAAVLGIVLGLALGRSRTVYALCDPVLQFARAVPPP 123

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P+ V         P    S  ++FG  W +L N   G         +VA++  +   
Sbjct: 124 ALVPVFVVVFDLG--TPMQLAS--IVFGAIWPVLINTAEGVRGIDPLRLDVAATMRMRPA 179

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + LP   P    G   +   +    + SE+           G+G  + ++  +  
Sbjct: 180 ERIVLLYLPAALPRIFAGLRLSLSLSLILMVFSELLPG-----TADGIGFQLTDAQTRSD 234

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V   ++++      LN  L
Sbjct: 235 LLTVWAVMVLLGALGHLLNSVL 256



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 80/196 (40%), Gaps = 13/196 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L+   ++ +   V      +SR +  +  P+L   +++P    +   VV F 
Sbjct: 75  LLPSLGRVLAGFALAAVLGIVLGLALGRSRTVYALCDPVLQFARAVPPPALVPVFVVVFD 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P ++         +I    +W +  +  + +  I     +V+ + R+   ++   L 
Sbjct: 135 LGTPMQLA--------SIVFGAIWPVLINTAEGVRGIDPLRLDVAATMRMRPAERIVLLY 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +S+S     +V SE++          GIG  +  A    DLL +   
Sbjct: 187 LPAALPRIFAGLRLSLSLSLILMVFSELLPG-----TADGIGFQLTDAQTRSDLLTVWAV 241

Query: 245 MLTMLGVIFLYDQLLF 260
           M+ +  +  L + +L 
Sbjct: 242 MVLLGALGHLLNSVLL 257


>gi|33593078|ref|NP_880722.1| putative binding-protein-dependent transport protein [Bordetella
           pertussis Tohama I]
 gi|33602341|ref|NP_889901.1| putative binding-protein-dependent transport protein [Bordetella
           bronchiseptica RB50]
 gi|33563453|emb|CAE42335.1| putative binding-protein-dependent transport protein [Bordetella
           pertussis Tohama I]
 gi|33576780|emb|CAE33859.1| putative binding-protein-dependent transport protein [Bordetella
           bronchiseptica RB50]
 gi|332382490|gb|AEE67337.1| putative binding-protein-dependent transport protein [Bordetella
           pertussis CS]
          Length = 285

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ +   +   +         +  +   + V  L     +T   M+ A  +S++      
Sbjct: 56  VVAVTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVVIGIPLG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A+   L   ++P+LD+MQ++P   +L   V+ F           ++ AI A     V
Sbjct: 116 VLMARVDWLRAGMLPVLDVMQTMPSFVYLIPVVMLFGLG--------KIPAIIATVIYAV 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +       +  + R++ E +R+F  +  Q+ + + +P ++P ++  +  +       V
Sbjct: 168 PPLIRLTDLGIRLVDREVLEAARAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G  + L I   ++   L A L ++ +  L+D++
Sbjct: 228 VIASMI-------GARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 18/231 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIW 401
           W+ VV  V I IAW     I        +L VI +      G  T+  +++   ++ +I 
Sbjct: 53  WWAVVA-VTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVVIG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ +     + + + P   ++   P+ V+   VV           +   +  +    
Sbjct: 112 IPLGVLMARVDWLRAGMLPVLDVMQTMPSFVYLIPVVMLFGLG----KIPAIIATVIYAV 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++     G      +  E A +F     +    + LP   P  + G       A +  
Sbjct: 168 PPLIRLTDLGIRLVDREVLEAARAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +     +      +L  L +    +  +R 
Sbjct: 228 VIASMIG-------ARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271


>gi|33596372|ref|NP_884015.1| putative binding-protein-dependent transport protein [Bordetella
           parapertussis 12822]
 gi|33566141|emb|CAE37042.1| putative binding-protein-dependent transport protein [Bordetella
           parapertussis]
          Length = 285

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ +   +   +         +  +   + V  L     +T   M+ A  +S++      
Sbjct: 56  VVAVTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVVIGIPLG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A+   L   ++P+LD+MQ++P   +L   V+ F           ++ AI A     V
Sbjct: 116 VLMARVDWLRAGMLPVLDVMQTMPSFVYLIPVVMLFGLG--------KIPAIIATVIYAV 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +       +  + R++ E +R+F  +  Q+ + + +P ++P ++  +  +       V
Sbjct: 168 PPLIRLTDLGIRLVDREVLEAARAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G  + L I   ++   L A L ++ +  L+D++
Sbjct: 228 VIASMI-------GARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 18/231 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIW 401
           W+ VV  V I IAW     I        +L VI +      G  T+  +++   ++ +I 
Sbjct: 53  WWAVVA-VTIAIAWLVSRRIGLSLAMGALLCVIGVLGLWDAGMQTLALMIMAAGLSVVIG 111

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ +     + + + P   ++   P+ V+   VV           +   +  +    
Sbjct: 112 IPLGVLMARVDWLRAGMLPVLDVMQTMPSFVYLIPVVMLFGLG----KIPAIIATVIYAV 167

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++     G      +  E A +F     +    + LP   P  + G       A +  
Sbjct: 168 PPLIRLTDLGIRLVDREVLEAARAFGANPRQQLFGVQLPLALPNIMAGINQTTMMALSMV 227

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +++ +           GLG  +     +      +L  L +    +  +R 
Sbjct: 228 VIASMIG-------ARGLGYEVLLGINRLEVGRGLLAGLGIVVLAVLFDRI 271


>gi|163732479|ref|ZP_02139924.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter litoralis Och 149]
 gi|161393839|gb|EDQ18163.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter litoralis Och 149]
          Length = 513

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 85/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + +LL  +                + +    + A  T   + +A  +S+L     
Sbjct: 291 IVIASLIVLLTWLTAGVRTAVWSAAFLSYMGLLGFWEKAMTTLALLGTAACLSILIGIPL 350

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+  +    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 351 GMFCARRPKFYSFIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 402

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 403 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLAAPSIRAGINQTIMLSLAM 462

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 463 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 85/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    +V    +    ++  +     +Y  +L        T+  +     ++ +
Sbjct: 286 VSTPWIVIASLIVLLTWLTAGVRTAVWSAAFLSYMGLLGFWEKAMTTLALLGTAACLSIL 345

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   S IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 346 IGIPLGMFCARRPKFYSFIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 402

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A SF    W     + LP   P    G       +  
Sbjct: 403 GT-PVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLAAPSIRAGINQTIMLSLA 461

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 462 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508


>gi|326775324|ref|ZP_08234589.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655657|gb|EGE40503.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 292

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L        L        P ++   V        LP   + +  R    +VI L 
Sbjct: 51  VVLLALWWAASATGLLTADVLASPAEVFRAVGELWGNGQLPDALTTSLTRSGLGLVIGLA 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   +R    +L   L  +++IP L  +   +V+F           E A I  
Sbjct: 111 AGLALGIVTGFTRLGDELLDSSLQTLRTIPFLSLVPLFMVWFGIN--------ETAKILL 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  S    +      L E  R+F +S       + +P ++P L+  + +SM+
Sbjct: 163 IAVATTFPMYVSTSSGVRTTDPKLIEAMRAFGMSRLGIVRQVVLPGALPSLLAGLRLSMT 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                ++A+E I          GIG  ++ A        +   +L    +    D   +L
Sbjct: 223 LSVIALIAAEEI------NATAGIGYLMSQAQSYARTDILAVCILVYGLLGLTADVLVRL 276

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 277 LERVLMPW 284



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 11/263 (4%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
               L      +R      +           +L ++W     G+       S   +    
Sbjct: 22  PPSGLVTPRPHLRSPRSRPYALTVRALGPVVLLALWWAASATGLLTADVLASPAEVFRAV 81

Query: 372 T-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +      ++ R  + ++I     + +GI  GF       +    Q L   P 
Sbjct: 82  GELWGNGQLPDALTTSLTRSGLGLVIGLAAGLALGIVTGFTRLGDELLDSSLQTLRTIPF 141

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL +               LL+   T + +  +  +G         E   +F ++ 
Sbjct: 142 LSLVPLFMVWFGI----NETAKILLIAVATTFPMYVSTSSGVRTTDPKLIEAMRAFGMSR 197

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R ++LPG  P  + G   +   +  A I +E  +       T G+G  ++++    
Sbjct: 198 LGIVRQVVLPGALPSLLAGLRLSMTLSVIALIAAEEIN------ATAGIGYLMSQAQSYA 251

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               + + +L+     L  +  +
Sbjct: 252 RTDILAVCILVYGLLGLTADVLV 274


>gi|186471961|ref|YP_001863279.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184198270|gb|ACC76233.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 285

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 103/259 (39%), Gaps = 21/259 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHS 60
           P     R+    + L  ++L   +  +   G     +   I+       D          
Sbjct: 24  PDTAQPRVRAVAWHLAPWLLPAVLFALWNVGCARGWIAPQILPPPQFVFDTLRELAANGD 83

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+L    +  L   +       SR +   ++P  + +  IP+LG+L F +
Sbjct: 84  LARHTLVSLQRVLVGFGVGALGGLLIGAALGLSRTVEGYVLPTFNALVQIPVLGWLPFLL 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +      P K I         I  + +  +T S  Q + N P   +EV+R F  S WQ+ 
Sbjct: 144 LLVGVGEPLKYI--------LIAHAALVPVTLSTMQGVRNTPAPFDEVARVFGYSRWQRV 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P L   + ++ +  W  +V  E++   +      G+G  I    +   L  
Sbjct: 196 IHIVLPAAVPTLATGVRLAFTKAWLALVVVELVASSE------GLGYLIVYGRQLFQLDL 249

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++ +++ +  + F  ++LL
Sbjct: 250 VMASVVIVGAIGFAINRLL 268



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 18/277 (6%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                 S   K+  R+         +  ++  +     ++L    F +   V     W +
Sbjct: 3   KAIGQWSTISKRATRSQTSAVPDTAQPRVRAVAWHLAPWLLPAVLFAL-WNVGCARGWIA 61

Query: 364 IGYIVNHFTYQDVLY-------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
              +       D L        +     +++ RV+V   + ++  + +G  +G    +  
Sbjct: 62  PQILPPPQFVFDTLRELAANGDLARHTLVSLQRVLVGFGVGALGGLLIGAALGLSRTVEG 121

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P    L   P   + P ++  V            +L+       +  + + G    P
Sbjct: 122 YVLPTFNALVQIPVLGWLPFLLLLVGVG----EPLKYILIAHAALVPVTLSTMQGVRNTP 177

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             F EVA  F  + W+   +I+LP   P   TG   A   AW A +V E+ +       +
Sbjct: 178 APFDEVARVFGYSRWQRVIHIVLPAAVPTLATGVRLAFTKAWLALVVVELVA------SS 231

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG  I    +      V+  V+I+     A+NR L
Sbjct: 232 EGLGYLIVYGRQLFQLDLVMASVVIVGAIGFAINRLL 268


>gi|75762927|ref|ZP_00742732.1| Alkanesulfonates transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218897993|ref|YP_002446404.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228901454|ref|ZP_04065639.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis IBL 4222]
 gi|228965855|ref|ZP_04126929.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74489584|gb|EAO52995.1| Alkanesulfonates transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218542347|gb|ACK94741.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228793846|gb|EEM41375.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228858162|gb|EEN02637.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis IBL 4222]
          Length = 282

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 86/238 (36%), Gaps = 17/238 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E   
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETRN 282



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|73538635|ref|YP_299002.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72121972|gb|AAZ64158.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 298

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKSR +  V+ PILD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTIISLILGVPLGIWAAKSRVVAAVVRPILDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            +  +  ++ E   +F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIRQVNMEIVEAGHAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNEVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVLLAIILDRI 266



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +     +      + W+   +     +            IT+   +   II+ I+ +P
Sbjct: 49  MWLMMAIFIGIGLWRVGWRFALFTAASLSVIFATGFWDQTVITLGLTLSSTIISLILGVP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW      +++ ++P   L+   PA V+            +   L   +  +      
Sbjct: 109 LGIWAAKSRVVAAVVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G      +  E   +F  T W+    +  P   P  + G       A +  I+
Sbjct: 169 ----TSLGIRQVNMEIVEAGHAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVII 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 225 ASMVGAG-------GLGNEVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|329929455|ref|ZP_08283189.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328936343|gb|EGG32790.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 298

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 93/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +++  ++  L +  +     P  I +          L  +   + +R  +   +   
Sbjct: 59  VSLLVLWQVLGDLGYISELLFPTPLRITEAFAHLAGSGDLGGHVRISLVRAAAGFALGGA 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L    R    VL P + +++ IP L      V++F           E + I  
Sbjct: 119 LGLAFGILVGVFRISERVLDPSIQMVRMIPHLAVAPLFVLWFGIG--------ESSKILL 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +    Y  +  +     EV+R    +  Q+ + L +P S+P +   + +S+ 
Sbjct: 171 IAKGAFFPLYIQTYLGIRGVDNKWFEVTRVLGFTRIQQIFRLVIPSSLPHIFLGIRLSLG 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  +  A +      +   ++    +    D   +L
Sbjct: 231 LAWLGLVVAEIMG------STSGIGYLMTDARQFSKTATVFVCIVLFAVIGKAADAAVRL 284

Query: 259 LFRPMIVWSNKFR 271
           + R ++ W++ + 
Sbjct: 285 VERRLLKWNDSYE 297



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 25/289 (8%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P+  +   +       R             ++    L       V  + +      +GY
Sbjct: 14  APVHGSESLVPEPAAKQRQRVSPGESGAGIWRKSLGTLAAGAVLPVSLLVLWQVLGDLGY 73

Query: 367 IVNHFTY------------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           I                       +     I++ R      +   + +  GI +G     
Sbjct: 74  ISELLFPTPLRITEAFAHLAGSGDLGGHVRISLVRAAAGFALGGALGLAFGILVGVFRIS 133

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  Q++   P     PL V        +      LL+  G  + +      G   
Sbjct: 134 ERVLDPSIQMVRMIPHLAVAPLFVLWFGIGESSK----ILLIAKGAFFPLYIQTYLGIRG 189

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             N + EV      T  +    +++P   P+   G   + G AW   +V+E+        
Sbjct: 190 VDNKWFEVTRVLGFTRIQQIFRLVIPSSLPHIFLGIRLSLGLAWLGLVVAEIMG------ 243

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            T+G+G  + ++ +      V + +++      A +   R +   L  +
Sbjct: 244 STSGIGYLMTDARQFSKTATVFVCIVLFAVIGKAADAAVRLVERRLLKW 292


>gi|330812274|ref|YP_004356736.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380382|gb|AEA71732.1| putative glycine betaine/L-proline ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 281

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T  ++L A ++ +L       +AA       ++ P+LD+MQ++P   +L  T+ 
Sbjct: 88  WQETMETLAQVLFATLVCVLIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLT 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  + ++P +L +  ++F  S  Q   
Sbjct: 148 LFGL---GVVPGLISTVVFAIAAP-----IRLTYLGIRDVPDELMDAGKAFGCSRRQLLS 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLSMVVIAALV-------GADGLGKPVVNALNTADIALG 252

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A L ++ +  + D++  +P
Sbjct: 253 FEAGLAIVLLAIMLDRICKQP 273



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L        T+ +V+   ++  +I +P+GI    +P   + ++P
Sbjct: 69  WGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVLIGVPLGIVAAHKPMFYTLMRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P++  
Sbjct: 129 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPDELM 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQP 273


>gi|56697293|ref|YP_167659.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679030|gb|AAV95696.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 343

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 84/195 (43%), Gaps = 14/195 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A +T   +     + +LF        +++ RL  + +PILD++Q++P   +L   +  F
Sbjct: 149 HAMQTLAIIFVCAFLCVLFGVPIGIAMSRNDRLQRMTIPILDMLQTLPSFVYLIPLIFLF 208

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P            AI    +  +       +  + RD+ E + SF ++  QK + +
Sbjct: 209 SVTEPKLYG-------IAIILYAIVPVIRLTDLGIRLVDRDVIEAADSFGMTDRQKLFGV 261

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L 
Sbjct: 262 QIPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLRGIRNLELGVGLV 314

Query: 244 AMLTMLGVIFLYDQL 258
           + L ++ +  + D++
Sbjct: 315 SGLGIVLLAVILDRV 329



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 74/232 (31%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +     +       + + +G+++    +   +        T+  + V   +  +
Sbjct: 107 ATPWWIMMPLLALVVFFASRSMRLVGFVMACLMFLAFVDHYDHAMQTLAIIFVCAFLCVL 166

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +P+GI +     +     P   +L   P+ V+    +  +  + +       + +I  
Sbjct: 167 FGVPIGIAMSRNDRLQRMTIPILDMLQTLPSFVYL---IPLIFLFSVTEPKLYGIAIILY 223

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A SF +T  +    + +P   P  + G       +  
Sbjct: 224 AIVPVIRLTDLGIRLVDRDVIEAADSFGMTDRQKLFGVQIPLALPNIMAGVNQTIMMSLA 283

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++  L +    + L+R
Sbjct: 284 MVVIASLVS-------APGLGVLVLRGIRNLELGVGLVSGLGIVLLAVILDR 328


>gi|262376493|ref|ZP_06069722.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
 gi|262308632|gb|EEY89766.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
          Length = 314

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S++ IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFTAFFISSLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +     ++   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRLVDRSLIEAGFTLGTNKFKSLLHVVIPAALPE 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRNLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVI 291

Query: 566 VLALNRF---LWHPLYLY 580
            L  +     L   L+ +
Sbjct: 292 GLLCDVILMKLGQRLFKW 309



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 76/216 (35%), Gaps = 14/216 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P   +     +    +   + +A  IS L       L   S ++  +  P ++
Sbjct: 100 ITAFTTEPAQANAPWFHESLWHSIKLVFTAFFISSLVGIPLGILCGFSNKISQLTEPFVE 159

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   + R L
Sbjct: 160 FFRYLPAPAFGALAVAILGINDAPK--------IAIIVIGTLFQQILIIANTTRLVDRSL 211

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E   +   + ++   ++ +P ++P +  N+ + +   W +++ +E+I          GI
Sbjct: 212 IEAGFTLGTNKFKSLLHVVIPAALPEIYRNLRVLLGWAWTYLIVAELIG------STSGI 265

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +I    + Q+   +  A+L +  +  L D +L +
Sbjct: 266 TWFITQQARYQNFDNVFAAILIIGVIGLLCDVILMK 301


>gi|307330681|ref|ZP_07609819.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306883660|gb|EFN14708.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 673

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 86/575 (14%), Positives = 171/575 (29%), Gaps = 54/575 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVI 78
           +    L    +   L  I        I     ++  +  L        +T   M  A+  
Sbjct: 115 VALLALGWAGVTAGLTLIAWRVAGVRIAVTTLVSFAICGLLGMWVPTMQTLALMAIAVTA 174

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++   +       S     VL P+LD MQ +P   +L   V+ F N  PG        A
Sbjct: 175 SVVIGGLLGLAGGLSEWAFRVLRPVLDTMQVLPAFAYLLPVVMIFGNGVPG--------A 226

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A        M       L      + E   S   +  Q+     +P +   L+  +  
Sbjct: 227 VLATVIYAAPPMARLTALGLRGADAGVLEAVTSLGATWRQRLLSARLPLARKELLLGINQ 286

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ- 257
           ++       V + +I  G       G+G  +  A+   D+   L A L ++ +  + D+ 
Sbjct: 287 TIMMALSMAVIASVIGGG-------GLGDRVYQALSSVDVGKALAAGLPIVLLAVMMDRT 339

Query: 258 -----------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
                             L R    W+    +     +    +        T +   I  
Sbjct: 340 IGSAGERLGEPPAEGGPRLLRGWPAWAGAAVVTAVITVVGRLTGSQAWP--TGWTVAIEE 397

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
               F   + +++      +G     +  ++++   +     +  + W+ V+  VA    
Sbjct: 398 PVNQFKEWMVDHLYTGVPVVGGT-ADWAADYVKWILDPLREGLQGLPWYAVLLIVAALAW 456

Query: 361 WQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                      T       VL V      T+ +V+  + +  ++   +GIW      +  
Sbjct: 457 LIGTWATALTATAAMAAIGVLGVWEPSMDTLSQVLAAVFVTLVLGFAIGIWAARSTRLER 516

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P   +    P  V+   VV+              +  +      ++     G     
Sbjct: 517 MMRPVLDMFQTMPQFVYLIPVVALFGVGRAPAAAAAIVYALPA----VIRITTQGIRNVD 572

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A S   T  +  R + LP   P  +              ++  +   G      
Sbjct: 573 PAALESARSLGATQGQQLRQVQLPLARPALLLAVNQGVVLVLAVVVIGGLVGSGA----- 627

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             LG  +     +G     ++    + C  L L+R
Sbjct: 628 --LGYDVLFGLAQGDLATGLVAGTAIVCLGLMLDR 660



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 90/228 (39%), Gaps = 15/228 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I   L  +  T             + V  + + +  T  ++L+A+ ++L+  F     A
Sbjct: 449 LIVAALAWLIGTWATALTATAAMAAIGVLGVWEPSMDTLSQVLAAVFVTLVLGFAIGIWA 508

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S RL  ++ P+LD+ Q++P   +L   V  F          A + A+ A+        
Sbjct: 509 ARSTRLERMMRPVLDMFQTMPQFVYLIPVVALFGVGRAPAAAAAIVYALPAVIRI----- 563

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                Q + N+     E +RS   +  Q+   + +P + P L+  +   +      VV  
Sbjct: 564 ---TTQGIRNVDPAALESARSLGATQGQQLRQVQLPLARPALLLAVNQGVVLVLAVVVIG 620

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            ++  G        +G  +   + + DL   L A   ++ +  + D++
Sbjct: 621 GLVGSGA-------LGYDVLFGLAQGDLATGLVAGTAIVCLGLMLDRV 661



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L + W  V  G+ + IAW+  G  +   T         LG       T+  + + +  +
Sbjct: 117 LLALGWAGVTAGLTL-IAWRVAGVRIAVTTLVSFAICGLLGMWVPTMQTLALMAIAVTAS 175

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I   +G+  G        ++P    +   PA  +   VV           L   +   
Sbjct: 176 VVIGGLLGLAGGLSEWAFRVLRPVLDTMQVLPAFAYLLPVVMIFGNGVPGAVLATVIY-- 233

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +      G         E  +S   T  +      LP      + G       A
Sbjct: 234 --AAPPMARLTALGLRGADAGVLEAVTSLGATWRQRLLSARLPLARKELLLGINQTIMMA 291

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++++ V   G       GLG  + ++       + +   L +    + ++R +
Sbjct: 292 LSMAVIASVIGGG-------GLGDRVYQALSSVDVGKALAAGLPIVLLAVMMDRTI 340


>gi|302530586|ref|ZP_07282928.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
 gi|302439481|gb|EFL11297.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
          Length = 265

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 85/257 (33%), Gaps = 12/257 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +++ R LG     +    + +   +  + + +  +F     +A   A        +    
Sbjct: 3   RRMSRGLGGFARKWLLFAIVVVLWEIATRLSESVFFPPPSKIAAAAAKLWFSGPASQVFL 62

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   V      ++ RV+   ++A +I + +G  +G        + P      A P    
Sbjct: 63  GDP--VFDHILPSLGRVLGGWLLAVVIGVALGTALGRSRTGMDYVGPLFAFFRAIPPPAL 120

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +                 +IFG+ W +L N + G  +      E A +F      W
Sbjct: 121 VPVFIILFGIGPGMQTAT----IIFGSLWPVLMNTVDGVRSVDKVKVETARAFRTPKRYW 176

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P    G   +   A     +SE+           G+G  +  +     F 
Sbjct: 177 IGLVVLPSALPKIFAGLRLSLSIALILMAISELVG------ALNGIGYALLAAQRSYDFD 230

Query: 554 EVVLGVLIMCCFVLALN 570
           ++   ++++       N
Sbjct: 231 QMWAWIVLLGILGYGFN 247



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+L   +++++      T   +SR     + P+    ++IP    +   ++ F
Sbjct: 69  HILPSLGRVLGGWLLAVVIGVALGTALGRSRTGMDYVGPLFAFFRAIPPPALVPVFIILF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             + PG            I    +W +  +    + ++ +   E +R+FR         +
Sbjct: 129 G-IGPGMQTA-------TIIFGSLWPVLMNTVDGVRSVDKVKVETARAFRTPKRYWIGLV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +S+S     +  SE++        L GIG  +  A +  D   +  
Sbjct: 181 VLPSALPKIFAGLRLSLSIALILMAISELVG------ALNGIGYALLAAQRSYDFDQMWA 234

Query: 244 AMLTMLGVIFLYDQLLF---RPMIVWSN 268
            ++ +  + + ++  L    R ++ W  
Sbjct: 235 WIVLLGILGYGFNAALLGLERRVLGWQP 262


>gi|254503977|ref|ZP_05116128.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440048|gb|EEE46727.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 512

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +V+  + ILL  +                + +      A  T   + +A  +S+      
Sbjct: 290 IVVASLIILLTWLTAGARAAIWSGAFLAYMGLLGFWDKAMTTLALLGTAACLSIAIGIPL 349

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+  R   V+ PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 350 GMFAARRPRFYAVIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 401

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + +F  + W     + +P + P +   +  ++      
Sbjct: 402 GTPVVRLTVLGLRGVPESVREAAIAFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLAM 461

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 462 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 507



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    ++    +    ++  +      Y  +L        T+  +     ++  
Sbjct: 285 VSTPWIVVASLIILLTWLTAGARAAIWSGAFLAYMGLLGFWDKAMTTLALLGTAACLSIA 344

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   + IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 345 IGIPLGMFAARRPRFYAVIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 401

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A +F    W     + LP   P    G       +  
Sbjct: 402 GT-PVVRLTVLGLRGVPESVREAAIAFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLA 460

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 461 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 507


>gi|328543037|ref|YP_004303146.1| aliphatic sulfonate ABC transporter permease [polymorphum gilvum
           SL003B-26A1]
 gi|326412783|gb|ADZ69846.1| Probable aliphatic sulfonate ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 277

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 92/283 (32%), Gaps = 20/283 (7%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI- 367
           ++       RT            L +   +  +    I  F     +A    W +     
Sbjct: 1   MTYQFSDAARTTNGPDVRAVLGRLLVTGRRIAANYGPILGFFAGWQIASTAGWLNPAVFP 60

Query: 368 ----VNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
               V    +  +     L    +++ R  +  + A+ + IP+G+++G    +   + P 
Sbjct: 61  PIDRVAGALWNGISSGALLDDIAVSLQRAGIAFLAAAALGIPLGLFMGQIRAVEQALDPI 120

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            QL     A   +P+ +  +     +       ++ + T + IL   I G         E
Sbjct: 121 LQLFRQTSALALYPVFILLLGLGEASK----VFVIFWATLFPILLATIGGVKEVDPKLIE 176

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +A +F  T    +R ++LP   P    G   +   A    I +E+           G+G 
Sbjct: 177 MARTFGATRLTTFRRVVLPASVPSIFVGLRLSATTALLLLIAAEMIG------ANKGVGF 230

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
            +  +      P +   + ++    LA N     L   L  + 
Sbjct: 231 QVMNAQYNFQIPLMFAAIFLLAFLGLAANWVLVTLQRRLCRWS 273



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 18/263 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRT 68
              RRI  N   +L F     I +           P D +   +   +   +L    + +
Sbjct: 26  VTGRRIAANYGPILGFFAGWQIASTAGWLNPAVFPPIDRVAGALWNGISSGALLDDIAVS 85

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R   A + +            + R +   L PIL + +    L      ++       
Sbjct: 86  LQRAGIAFLAAAALGIPLGLFMGQIRAVEQALDPILQLFRQTSALALYPVFILLLGLG-- 143

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + +F IF + ++ +  +    +  +   L E++R+F  +    F  + +P S
Sbjct: 144 ------EASKVFVIFWATLFPILLATIGGVKEVDPKLIEMARTFGATRLTTFRRVVLPAS 197

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   + +S +     ++A+EMI          G+G  +  A     +  +  A+  +
Sbjct: 198 VPSIFVGLRLSATTALLLLIAAEMIGANK------GVGFQVMNAQYNFQIPLMFAAIFLL 251

Query: 249 LGVIFLYDQLLF---RPMIVWSN 268
             +    + +L    R +  WS 
Sbjct: 252 AFLGLAANWVLVTLQRRLCRWSP 274


>gi|282863091|ref|ZP_06272151.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282562073|gb|EFB67615.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 275

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 70/233 (30%), Gaps = 10/233 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                 F         +    +  + ++    +      +              ++    
Sbjct: 23  LRPKRRFPPAPVLNLAALAAGLGIWALLARAGVQALPGPVAVGKRAAELIADGTLVVDAL 82

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+V   + +++ +PVG  +G+ P     ++P+ Q     P     PL +  +   
Sbjct: 83  ASLRRVLVGFALGTLLAVPVGFLMGWYPVARGLLEPYIQFFRTVPPLAMIPLAIVLMGIG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                +    ++        +     G         + A          +  +++P   P
Sbjct: 143 ----EVPKIFVIFLAAFLSSVVAAFQGVVGVDRTLIDAARVLGARDGTVFLKVVVPASAP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           + + G     G AW   + +E+ +         GLG  +  +      P + +
Sbjct: 199 FILVGMRIGLGSAWGTLVAAELIA------AQEGLGFRMQSAQLYYDLPTIFV 245



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 16/234 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLH--GIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            RR  P     LA +     I  LL   G+Q    P  +       +   +L   A  + 
Sbjct: 26  KRRFPPAPVLNLAALAAGLGIWALLARAGVQALPGPVAVGKRAAELIADGTLVVDALASL 85

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+L    +  L       L         +L P +   +++P L  +   +V        
Sbjct: 86  RRVLVGFALGTLLAVPVGFLMGWYPVARGLLEPYIQFFRTVPPLAMIPLAIVLMGIG--- 142

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E+  IF IF +   +   + +Q +  + R L + +R         F  + VP S 
Sbjct: 143 -----EVPKIFVIFLAAFLSSVVAAFQGVVGVDRTLIDAARVLGARDGTVFLKVVVPASA 197

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           P ++  M + +   W  +VA+E+I          G+G  +  A    DL  I  
Sbjct: 198 PFILVGMRIGLGSAWGTLVAAELIA------AQEGLGFRMQSAQLYYDLPTIFV 245


>gi|221209305|ref|ZP_03582286.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD1]
 gi|221169993|gb|EEE02459.1| choline ABC transporter, permease protein [Burkholderia multivorans
           CGD1]
          Length = 295

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISL+        AAKS+ +  ++ PILD+MQ++P   +L    + F    
Sbjct: 88  TLGLTLSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLFGL-- 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 146 -GRVPGILSTVIFAMPPA-----VRLTSLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPN 199

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 200 ALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 252

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 253 VVLLAIILDRI 263



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 19/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++  S        +     + R +  +          +     +++ + I  + V 
Sbjct: 3   PLGSWVDQSVHYLLDHDAATFDAIGRAIEGLAALIEHGLQAVPMWLMMAFFIGIGLWRVG 62

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A+      +      F  Q V        IT+   +   II+ ++ IP+GIW     
Sbjct: 63  WRFALFTTLSLLLIFATGFWDQTV--------ITLGLTLSSTIISLVLGIPLGIWAAKSK 114

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +++ ++P   L+   PA V+            +   L   +  +             G 
Sbjct: 115 WVAAIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----TSLGI 170

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                +  E   +F  T W+    +  P   P  + G       A +  I++ +   G  
Sbjct: 171 RHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-- 228

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  S ++          L +    + L+R 
Sbjct: 229 -----GLGNDVLASIQRLDIGLGFESGLSVVLLAIILDRI 263


>gi|73541164|ref|YP_295684.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72118577|gb|AAZ60840.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 301

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV     +A +  +P+G+ +G          P  +     P   + PL+V      
Sbjct: 109 ASLVRVFGAFALAVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGID 168

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+       +  +  AG  +   +    A S   T W+  R+++LP   P
Sbjct: 169 ETSK----ILLIYLACFAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALP 224

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG   A G  W   + +E+ +       T GLG  +  ++       V++G+L++  
Sbjct: 225 DILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDVVIMGILLIGL 278

Query: 565 FVLALNRFLWH 575
                +  +  
Sbjct: 279 IAFLFDLLMRK 289



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 84/199 (42%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   + +R+  A  +++L       L   SR    V  P ++  + +P L +L   V
Sbjct: 103 LLDHFHASLVRVFGAFALAVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPLIV 162

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E + I  I+ +    +  S    + ++  +    + S   + WQ  
Sbjct: 163 IWFGID--------ETSKILLIYLACFAPLAMSARAGVRSVTIEQINAAYSMGATPWQVI 214

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 215 RHVVLPAALPDILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDV 268

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++  +L +  + FL+D L+
Sbjct: 269 VIMGILLIGLIAFLFDLLM 287


>gi|62317420|ref|YP_223273.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269400|ref|YP_418691.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189022674|ref|YP_001932415.1| Prion protein [Brucella abortus S19]
 gi|237816972|ref|ZP_04595964.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus str. 2308 A]
 gi|254690919|ref|ZP_05154173.1| Prion protein [Brucella abortus bv. 6 str. 870]
 gi|254698701|ref|ZP_05160529.1| Prion protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732147|ref|ZP_05190725.1| Prion protein [Brucella abortus bv. 4 str. 292]
 gi|256256104|ref|ZP_05461640.1| Prion protein [Brucella abortus bv. 9 str. C68]
 gi|260544659|ref|ZP_05820480.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260756507|ref|ZP_05868855.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260759939|ref|ZP_05872287.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260763177|ref|ZP_05875509.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882327|ref|ZP_05893941.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|297249461|ref|ZP_06933162.1| glycine betaine/proline transport system permease [Brucella abortus
           bv. 5 str. B3196]
 gi|62197613|gb|AAX75912.1| glycine betaine/L-proline ABC transporter, permease protein,
           hypothetical [Brucella abortus bv. 1 str. 9-941]
 gi|82939674|emb|CAJ12667.1| Binding-protein-dependent transport systems inner membrane
           component:Prion protein [Brucella melitensis biovar
           Abortus 2308]
 gi|189021248|gb|ACD73969.1| Prion protein [Brucella abortus S19]
 gi|237787785|gb|EEP62001.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus str. 2308 A]
 gi|260097930|gb|EEW81804.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260670257|gb|EEX57197.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260673598|gb|EEX60419.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676615|gb|EEX63436.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260871855|gb|EEX78924.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|297173330|gb|EFH32694.1| glycine betaine/proline transport system permease [Brucella abortus
           bv. 5 str. B3196]
          Length = 301

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           L+A     G+  + L  +        +  ++ + L +H  L      +   +L++ VI++
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         A+S  +  ++ PILD+MQ++P   +L    ++F     G V       IF
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLISAAMFFGL---GAVPSTIATVIF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  ++
Sbjct: 161 AMP-----PVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTI 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       G+G+ +   I+  ++       L ++ +  + D++
Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCI-TMFRVVVLIIIAS 398
           ++ +  F  V  +++   W+              L +   +W G + ++  V+   +IA 
Sbjct: 44  LIAVPPFAGVAILSLLALWRVGWKFAVFTLLALALIIHMDLWSGTMESLSLVLASTVIAV 103

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI +     ++S ++P   L+   PA V+            +   +   +    
Sbjct: 104 VIGIPLGIAMARSDAVASIVRPILDLMQTMPAFVYLISAAMFFGLGAVPSTIATVIF--- 160

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +F E   +F  T  +    + LP   P  + G       + 
Sbjct: 161 -AMPPVVRLTNLGIRQVHAEFVEAGLAFGCTARQLLFKVQLPNAMPSIMAGVNQTIMLSL 219

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  +    ++ +      G L +    + L+R 
Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266


>gi|107023816|ref|YP_622143.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|105894005|gb|ABF77170.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
          Length = 321

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 130 SAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 188 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 246 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 299

Query: 566 VLALNRFLWHPLYLYGTRC 584
               +  +      +  R 
Sbjct: 300 AWLFDLAM-----RWIERR 313



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 123 LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 182

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 183 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 234

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 235 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 288

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 289 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 320


>gi|126640140|ref|YP_001083124.1| alkanesulfonate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 178

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+  G     S+ +    Q++   PA    PLV+                L+  G  + 
Sbjct: 3   LGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFP 58

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  N   G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV
Sbjct: 59  IYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIV 118

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +E  S         G+G     + E      V++G+L+        +  
Sbjct: 119 AETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 161



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 80/190 (42%), Gaps = 17/190 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   L   SR    +L   L ++++IP L  +   +++F           E A +F +  
Sbjct: 2   LLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID--------ETAKLFLVAV 53

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP ++  +  ++   W
Sbjct: 54  GVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVW 113

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
             ++ +E I          GIG     A +      +L  +L    +  L D   QLL R
Sbjct: 114 VLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLAQLLER 167

Query: 262 PMIVWSNKFR 271
            ++ W   ++
Sbjct: 168 YLLRWHAGYQ 177


>gi|254699720|ref|ZP_05161548.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|261750186|ref|ZP_05993895.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261739939|gb|EEY27865.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
          Length = 272

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|194291559|ref|YP_002007466.1| taurine transport protein, ABC superfamily, membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193225463|emb|CAQ71409.1| taurine transport protein, ABC superfamily, membrane component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 291

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 73/197 (37%), Gaps = 11/197 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M RV     +A    +P+G+ +G          P  +     P   + PL+V     
Sbjct: 98  AASMLRVFGAFALAVATAVPIGVMMGVSRIARGIFDPPIEFYRPLPPLAYLPLIVIWFGI 157

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +  +  AG  +   +    A S   T W+  R++++P   
Sbjct: 158 DETSK----VLLIFLACFAPLAMSAQAGVRSVTIEQINAAYSMGATPWQVVRHVVIPAAL 213

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W   + +E+ +       T GLG  +  ++       V++G++++ 
Sbjct: 214 PDILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDVVIMGIVLIG 267

Query: 564 CFVLALNRFLWHPLYLY 580
                 +  +   L  +
Sbjct: 268 LIAYVFDLLM-RKLARW 283



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 90/211 (42%), Gaps = 15/211 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++ + + LR+  A  +++        +   SR    +  P ++  + +P L +L   V
Sbjct: 93  LTEHFAASMLRVFGAFALAVATAVPIGVMMGVSRIARGIFDPPIEFYRPLPPLAYLPLIV 152

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+         IF +    +  S    + ++  +    + S   + WQ  
Sbjct: 153 IWFGIDETSKVL--------LIFLACFAPLAMSAQAGVRSVTIEQINAAYSMGATPWQVV 204

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 205 RHVVIPAALPDILTGMRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASNFLRTDV 258

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           ++  ++ +  + +++D LL R +  W   ++
Sbjct: 259 VIMGIVLIGLIAYVFD-LLMRKLARWLVPWK 288


>gi|114327203|ref|YP_744360.1| alkanesulfonates transport system permease [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315377|gb|ABI61437.1| alkanesulfonates transport system permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 280

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 17/268 (6%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
             +  R +                 Q     + +     V          S   I   FT
Sbjct: 6   FTRPARAMSSFPSWSSVRDTLSRRLQGGRRYVSLLLLLAVWQAGSSFGLISTRTIAAPFT 65

Query: 373 -------YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                        +I    +++ RV   ++I       + +  G        +    Q++
Sbjct: 66  ILATFRDLLLDGELIGHMSVSLLRVSAGLVIGIGAGTVLALVAGLSRLGEEIVDTPMQMV 125

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL +               LL+  G  + +  N+ AG  +      E   +
Sbjct: 126 RVLPHLALVPLFILWFGIGET----PKVLLVALGAVFPVYLNLFAGIRSVDRKLLEAGRT 181

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++       I+LPG  P+++TG   A G  W + +V+E  +        +G+G  + +
Sbjct: 182 LGLSRRETITAIVLPGALPHFLTGLRYAVGIGWLSLVVAEQVN------ADSGIGFMMID 235

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + E      +++G+L+     L  ++ +
Sbjct: 236 AREFLRTDIIIVGLLVYALLGLIADQAV 263



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 103/250 (41%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   +     +  L   +    P  I+      L    L  + S + LR+ + +VI + 
Sbjct: 40  LLLLAVWQAGSSFGLISTRTIAAPFTILATFRDLLLDGELIGHMSVSLLRVSAGLVIGIG 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A +A  SR    ++   + +++ +P L  +   +++F      KV+   L A+F 
Sbjct: 100 AGTVLALVAGLSRLGEEIVDTPMQMVRVLPHLALVPLFILWFGIGETPKVLLVALGAVFP 159

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         +++  + ++ R L E  R+  LS  +    + +P ++P  +  +  ++ 
Sbjct: 160 VY--------LNLFAGIRSVDRKLLEAGRTLGLSRRETITAIVLPGALPHFLTGLRYAVG 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GW  +V +E +          GIG  +  A +      I+  +L    +  + DQ + R
Sbjct: 212 IGWLSLVVAEQVNADS------GIGFMMIDAREFLRTDIIIVGLLVYALLGLIADQAV-R 264

Query: 262 PMIVWSNKFR 271
            +   + ++R
Sbjct: 265 WIEARALRWR 274


>gi|299529500|ref|ZP_07042937.1| ABC transporter membrane subunit [Comamonas testosteroni S44]
 gi|298722363|gb|EFI63283.1| ABC transporter membrane subunit [Comamonas testosteroni S44]
          Length = 285

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 10/209 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   +       ++     +  R    + +  ++ + + +  G      + I    Q+  
Sbjct: 73  LRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALVAGLSRSGEALIDGLVQIKR 132

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL +  +             L+       I  N  A   +      E+A + 
Sbjct: 133 AVPTLALIPLAIIWLGIGEA----MKVFLIFTAVLIPIYINTHAALRSIDIGHVELAQTL 188

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++   + R + LPG  P +  G   A    W A +V E+ +        TG+G  +  +
Sbjct: 189 GLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELIN------TQTGIGYLMNRA 242

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            + G    +V+G+LI     L  +  +  
Sbjct: 243 RDWGQTDVIVVGILIYALLGLFSDAAVRR 271



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 101/257 (39%), Gaps = 17/257 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVL--VIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQY 64
           P  +  R+ P +      +L  V    + L +   ET T P   +          SL  +
Sbjct: 29  PALVQDRLSPGMLLAGPALLLLVWEAASRLGYLSSETLTAPSQALRTGYEMALDGSLLPH 88

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R  + + + ++   + A +A  SR    ++  ++ I +++P L  +   +++  
Sbjct: 89  LLASAGRAYTGLFLGIVVGVLLALVAGLSRSGEALIDGLVQIKRAVPTLALIPLAIIWLG 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +F IFT+ +  +  + + +L +I     E++++  LS  +    + 
Sbjct: 149 IG--------EAMKVFLIFTAVLIPIYINTHAALRSIDIGHVELAQTLGLSRAEFIRKVA 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++PG    + M++S  W  +V  E+I          GIG  +  A        I+  
Sbjct: 201 LPGALPGFFVGLRMAVSLCWTALVVLELI------NTQTGIGYLMNRARDWGQTDVIVVG 254

Query: 245 MLTMLGVIFLYDQLLFR 261
           +L    +    D  + R
Sbjct: 255 ILIYALLGLFSDAAVRR 271


>gi|239991997|ref|ZP_04712661.1| putative glycine betaine ABC transporer permease protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 661

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 84/572 (14%), Positives = 171/572 (29%), Gaps = 50/572 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVI 78
           L+   L    + +    +        +     ++  +  L        +T   M+ A++ 
Sbjct: 105 LVLLALGWAGVTVFAAAVAWRVAGIRLALTAGVSFLLCGLLGMWVPTMQTLALMVVAVLA 164

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++   +    A  S R+  +L P+LD MQ +P   +L   V+ F    PG        A
Sbjct: 165 SVVLGLLLGLAAGLSDRVFRILRPVLDTMQVLPAFAYLLPVVLVFGIGVPG--------A 216

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A        M       L      + E   S   +G Q+     +P +   L+  +  
Sbjct: 217 VLATVVYAAPPMARLTALGLRGADSGVMEAVTSLGATGRQRLLSARLPLARKELLLGLNQ 276

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ- 257
           ++       V + +I  G       G+G  +  A+   D+ A L A + ++ +  + D+ 
Sbjct: 277 TIMMALSMAVIASVIGAG-------GLGDRVYQALSSVDVGAALAAGIPIVLLAVVLDRT 329

Query: 258 ---------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
                           L R    WS    +     +    +              I    
Sbjct: 330 TEAAGRRIGAEPTGPALLRGWRGWSLAAAVTAAVAVVGRAADGQVWPDG--LTVAIAGPV 387

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--- 359
                 + +++      +G            + +  R       +W  ++   A+     
Sbjct: 388 NTAKDWMVDHLYTGVPVVGGTADLASHFTSGVLNPLRSGLTGLPWWSVLLIVAALAWTIG 447

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W++    V       VL V      T+ +V+  + +  +I   V +       +   ++
Sbjct: 448 TWRTAATAVLAMAAIGVLGVWEPSMDTLSQVLAAVAVTLVIGFGVAVGAARSERLERLLR 507

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   +    P  V+   VV+              +  +       +     G        
Sbjct: 508 PVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAV----IRITTQGLRGVDPAA 563

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A S   T  +  R + +P   P  +     A        I+  +   G        L
Sbjct: 564 MECARSLGATPGQQLRQVQIPLARPSLLLAVNQAVVLVLAVVIIGGLVGSGA-------L 616

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           G  +     +G     ++    + C  L L+R
Sbjct: 617 GYDVVFGLAQGDLATGLVAGAAIVCLGLMLDR 648



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 91/284 (32%), Gaps = 20/284 (7%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGV----IRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           +    + +  +PL +    +          + F    +   + S + V  +L    +  V
Sbjct: 56  WPEALTADLSAPLGDVTDWIVSNRDSHPLFLYFFGHISNAVVLSVRGVYLVLLALGWAGV 115

Query: 353 CGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              A  +AW+  G  +       F    +L +      T+  +VV ++ + ++ + +G+ 
Sbjct: 116 TVFAAAVAWRVAGIRLALTAGVSFLLCGLLGMWVPTMQTLALMVVAVLASVVLGLLLGLA 175

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
            G    +   ++P    +   PA  +   VV               L  +      +   
Sbjct: 176 AGLSDRVFRILRPVLDTMQVLPAFAYLLPVVLVFGIG----VPGAVLATVVYAAPPMARL 231

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G     +   E  +S   TG +      LP      + G       A + ++++ V 
Sbjct: 232 TALGLRGADSGVMEAVTSLGATGRQRLLSARLPLARKELLLGLNQTIMMALSMAVIASVI 291

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             G       GLG  + ++         +   + +    + L+R
Sbjct: 292 GAG-------GLGDRVYQALSSVDVGAALAAGIPIVLLAVVLDR 328


>gi|239945529|ref|ZP_04697466.1| putative glycine betaine ABC transporer permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|291448984|ref|ZP_06588374.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces roseosporus NRRL 15998]
 gi|291351931|gb|EFE78835.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces roseosporus NRRL 15998]
          Length = 661

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 84/572 (14%), Positives = 171/572 (29%), Gaps = 50/572 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVI 78
           L+   L    + +    +        +     ++  +  L        +T   M+ A++ 
Sbjct: 105 LVLLALGWAGVTVFAAAVAWRVAGIRLALTAGVSFLLCGLLGMWVPTMQTLALMVVAVLA 164

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++   +    A  S R+  +L P+LD MQ +P   +L   V+ F    PG        A
Sbjct: 165 SVVLGLLLGLAAGLSDRVFRILRPVLDTMQVLPAFAYLLPVVLVFGIGVPG--------A 216

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A        M       L      + E   S   +G Q+     +P +   L+  +  
Sbjct: 217 VLATVVYAAPPMARLTALGLRGADSGVMEAVTSLGATGRQRLLSARLPLARKELLLGLNQ 276

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ- 257
           ++       V + +I  G       G+G  +  A+   D+ A L A + ++ +  + D+ 
Sbjct: 277 TIMMALSMAVIASVIGAG-------GLGDRVYQALSSVDVGAALAAGIPIVLLAVVLDRT 329

Query: 258 ---------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
                           L R    WS    +     +    +              I    
Sbjct: 330 TEAAGRRIGAEPTGPALLRGWRGWSLAAAVIAAVAVVGRAADGQVWPDG--LTVAIAGPV 387

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--- 359
                 + +++      +G            + +  R       +W  ++   A+     
Sbjct: 388 NTAKDWMVDHLYTGVPVVGGTADLASHFTSGVLNPLRSGLTGLPWWSVLLIVAALAWTIG 447

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W++    V       VL V      T+ +V+  + +  +I   V +       +   ++
Sbjct: 448 TWRTAATAVLAMAAIGVLGVWEPSMDTLSQVLAAVAVTLVIGFGVAVGAARSERLERLLR 507

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   +    P  V+   VV+              +  +       +     G        
Sbjct: 508 PVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAV----IRITTQGLRGVDPAA 563

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A S   T  +  R + +P   P  +     A        I+  +   G        L
Sbjct: 564 MECARSLGATPGQQLRQVQIPLARPSLLLAVNQAVVLVLAVVIIGGLVGSGA-------L 616

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           G  +     +G     ++    + C  L L+R
Sbjct: 617 GYDVVFGLAQGDLATGLVAGAAIVCLGLMLDR 648



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 91/284 (32%), Gaps = 20/284 (7%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGV----IRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           +    + +  +PL +    +          + F    +   + S + V  +L    +  V
Sbjct: 56  WPEALTADLSAPLGDVTDWIVSNRDSHPLFLYFFGHISNAVVLSVRGVYLVLLALGWAGV 115

Query: 353 CGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
              A  +AW+  G  +       F    +L +      T+  +VV ++ + ++ + +G+ 
Sbjct: 116 TVFAAAVAWRVAGIRLALTAGVSFLLCGLLGMWVPTMQTLALMVVAVLASVVLGLLLGLA 175

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
            G    +   ++P    +   PA  +   VV               L  +      +   
Sbjct: 176 AGLSDRVFRILRPVLDTMQVLPAFAYLLPVVLVFGIG----VPGAVLATVVYAAPPMARL 231

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G     +   E  +S   TG +      LP      + G       A + ++++ V 
Sbjct: 232 TALGLRGADSGVMEAVTSLGATGRQRLLSARLPLARKELLLGLNQTIMMALSMAVIASVI 291

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             G       GLG  + ++         +   + +    + L+R
Sbjct: 292 GAG-------GLGDRVYQALSSVDVGAALAAGIPIVLLAVVLDR 328


>gi|28211070|ref|NP_782014.1| taurine transport system permease protein tauC [Clostridium tetani
           E88]
 gi|28203509|gb|AAO35951.1| taurine transport system permease protein tauC [Clostridium tetani
           E88]
          Length = 258

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+VV    A II  P+G+  G+   I + ++P  +     P   ++ L+V  +  
Sbjct: 65  GASIERLVVAFFSAVIIATPLGLASGYNSKIRALLEPIIEFYRPLPPLAYYTLLVLWLGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N     L+       I  + ++       D+   A +     W+ + Y+I P   
Sbjct: 125 E----NESKIALLFLACFAPIYISCVSAVIKIKEDYINSAYTVGANKWQVFIYVIFPACL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG  TA G A+   + +E+ +        +G+G  + +++       + LG++IM 
Sbjct: 181 PDIFTGLRTALGVAYTTLVSAEMVA------AKSGIGWMVLDASRYLRSDIIFLGIIIMG 234

Query: 564 CFVLALNR 571
              + L++
Sbjct: 235 ITGILLDK 242



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L Q+   +  R++ A   +++        +  + ++  +L PI++  + +P L + T  
Sbjct: 59  TLLQHLGASIERLVVAFFSAVIIATPLGLASGYNSKIRALLEPIIEFYRPLPPLAYYTLL 118

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++       K        I  +F +    +  S   ++  I  D    + +   + WQ 
Sbjct: 119 VLWLGIENESK--------IALLFLACFAPIYISCVSAVIKIKEDYINSAYTVGANKWQV 170

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F Y+  P  +P +   +  ++   +  +V++EM+          GIG  +  A +     
Sbjct: 171 FIYVIFPACLPDIFTGLRTALGVAYTTLVSAEMVAAKS------GIGWMVLDASRYLRSD 224

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            I   ++ M     L D   Q +   ++ W  K
Sbjct: 225 IIFLGIIIMGITGILLDKSIQFIENKVVPWKGK 257


>gi|328470867|gb|EGF41778.1| putative permease [Vibrio parahaemolyticus 10329]
          Length = 298

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 108 WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 167

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 168 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGIIKVPEELLEAGKAFGASRMKLLF 219

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 220 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 272

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 273 FEAGLAIVLVAIILDRL 289



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           S     +  TL  I     + F  +     +     + WF   
Sbjct: 28  PLGQWMETGVDWLTINASGFFDAISITLETIIMFVVDIFKWMPPAAPIIMTAALAWFLHR 87

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 88  SLPLVVFIVLALLAILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 140

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 141 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 196

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 197 IKVPEELLEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG---- 252

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 253 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 289


>gi|302878013|ref|YP_003846577.1| binding-protein-dependent transport systems inner membrane
           component [Gallionella capsiferriformans ES-2]
 gi|302580802|gb|ADL54813.1| binding-protein-dependent transport systems inner membrane
           component [Gallionella capsiferriformans ES-2]
          Length = 276

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 88/241 (36%), Gaps = 11/241 (4%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
            R L VIR    +    L +   +   L  + W      +        +  ++  +++ +
Sbjct: 15  WRALWVIRGQLSQRAYLLFALTGMLLPLAAWGWLSASGLMDKVFMPSPVDVLLRLYSWFN 74

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    I+ +RV     +++++ IP+GI IG    + + ++P    +   PA  F P
Sbjct: 75  DDDLLGDMWISTYRVAAGFSLSAVLAIPLGIMIGTYRPVQALLEPLTDFIRYMPAVAFIP 134

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LV+  V             ++  GT + ++  +       P    E A +   T      
Sbjct: 135 LVMLWVGI----DESSKIAIIFIGTFFQMVLMIAEDVRRVPVTQIEAAQTMGATRSEIVS 190

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +I+    P  +       G AW   +V+E+ +        +GLG  I  +       ++
Sbjct: 191 RVIVQSAKPALLDTLRVTMGWAWTYLVVAELVA------ANSGLGYAILRAQRFMQTDKI 244

Query: 556 V 556
            
Sbjct: 245 F 245



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 83/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +    +   L      +T R+ +   +S +       +    R +  +L 
Sbjct: 59  MPSPVDVLLRLYSWFNDDDLLGDMWISTYRVAAGFSLSAVLAIPLGIMIGTYRPVQALLE 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+ D ++ +P + F+   +++            E + I  IF    + M   + + +  +
Sbjct: 119 PLTDFIRYMPAVAFIPLVMLWVGID--------ESSKIAIIFIGTFFQMVLMIAEDVRRV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P    E +++   +  +    + V  + P L+  + ++M   W ++V +E++        
Sbjct: 171 PVTQIEAAQTMGATRSEIVSRVIVQSAKPALLDTLRVTMGWAWTYLVVAELVAANS---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +      I   ++ +  +    DQL 
Sbjct: 227 --GLGYAILRAQRFMQTDKIFAGIILIGLIGLAIDQLF 262


>gi|322832257|ref|YP_004212284.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321167458|gb|ADW73157.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 263

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V+          L Q    +T R L    I      +   +   SR    +L 
Sbjct: 38  LPAPSAVVEAFWTLAKSGELWQNLKISTFRALIGFAIGGSLGLLLGFITGLSRWGERLLD 97

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 98  SSLQMLRNIPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNI 149

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E+SRS+ LSG+  F  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 150 DRGLLEMSRSYGLSGFPLFIQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG     A +      ++ A++    +  L D   +LL    + W   ++ ++
Sbjct: 206 --GIGYLAMNAREFLQTDVVVVAIVLYAILGKLADVLARLLESVWLRWHPAYQKKQ 259



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+ FR ++   I   + + +G   G        +    Q+L   P     PLV+      
Sbjct: 63  ISTFRALIGFAIGGSLGLLLGFITGLSRWGERLLDSSLQMLRNIPHLALIPLVILWFGI- 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT + I  N   G         E++ S+ ++G+  +  ++LPG  P
Sbjct: 122 ---DESAKIFLVALGTLFPIYLNTYHGIRNIDRGLLEMSRSYGLSGFPLFIQVVLPGALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+ +++   
Sbjct: 179 SIMVGVRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYAI 232

Query: 565 FVLALNRF 572
                +  
Sbjct: 233 LGKLADVL 240


>gi|268592987|ref|ZP_06127208.1| taurine uptake ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291311460|gb|EFE51913.1| taurine uptake ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 252

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 11/225 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
           +  I++     G    + + SI    +   +Q     +W    I++ RV++   IA+I  
Sbjct: 15  IFTIWYITTTIGGVSPVIFPSIPQAWHSLNFQLYSGQLWQDLSISLSRVLIAFAIAAIFA 74

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +GI +      +         +   P   + PL++       +       +L+I    
Sbjct: 75  FFLGIIMALSLRTNQIFNLTLNAIRQIPPLAWIPLLILWFGIGEVTK----IILIIKSAF 130

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL + I G    P  + E+ + +    W+  R I +P + P   TG   A G +W   
Sbjct: 131 FPILLSTINGIQTTPMTYIELGNLYQFNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATV 190

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + +E+ +        +G+G  I ++      P V++G+L++    
Sbjct: 191 VAAEMIA------ANSGIGYRINDARIMLDSPVVIVGILVIGIVG 229



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
             L    L Q  S +  R+L A  I+ +F F    + A S R   +    L+ ++ IP L
Sbjct: 45  FQLYSGQLWQDLSISLSRVLIAFAIAAIFAFFLGIIMALSLRTNQIFNLTLNAIRQIPPL 104

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +++F           E+  I  I  S  + +  S    +   P    E+   ++
Sbjct: 105 AWIPLLILWFGIG--------EVTKIILIIKSAFFPILLSTINGIQTTPMTYIELGNLYQ 156

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            + WQK   + +P  +P L   + ++M   W  VVA+EMI          GIG  I  A 
Sbjct: 157 FNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATVVAAEMIAANS------GIGYRINDAR 210

Query: 234 KEQDLLAILYAMLTMLGVI 252
              D   ++  +L +  V 
Sbjct: 211 IMLDSPVVIVGILVIGIVG 229


>gi|260553009|ref|ZP_05825924.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624]
 gi|260405251|gb|EEW98748.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624]
          Length = 265

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + I  N 
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINT 150

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S
Sbjct: 151 YHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS 210

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 211 ------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + + + P IF ++  V+     +  L   +    P  +V      L    L  +   +  
Sbjct: 15  VGQHLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLLVSGELWHHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALLGLLIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   QLL R ++ W   ++
Sbjct: 241 LGKLADVLAQLLERYLLRWHAGYQ 264


>gi|110634883|ref|YP_675091.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285867|gb|ABG63926.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 300

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ML A +IS L       L AK R +  +L+P+LDIMQ++P   +L   ++ F 
Sbjct: 111 TMQTLALMLMATLISCLVGIPTGVLVAKVRVMRNILIPMLDIMQTMPSFVYLIPAIMLFG 170

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ++ A+ A     V  +       +  + +++ E + +F  S  Q  + + 
Sbjct: 171 LG--------KVPAVLATIIYGVPPLIRLTSLGIRQVDQEVVEAALAFGSSSRQILFGVE 222

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV S MI          G+G  +   I+  D+   L A
Sbjct: 223 LPLAVPTILAGLNQTIMMSLSMVVVSSMI-------GARGLGQQVLEGIQTLDVGKGLEA 275

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 276 GVGIVILAVVLDRI 289



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 80/238 (33%), Gaps = 12/238 (5%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
              + + +   I  F  V  + +   ++    +        +L +  L   T+  +++  
Sbjct: 64  WVLRALPWWGTILIFMAVAYLCV-RNYKLPLLVGGLLMLAGMLGLWDLTMQTLALMLMAT 122

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +I+ ++ IP G+ +     + + + P   ++   P+ V+    +           +   L
Sbjct: 123 LISCLVGIPTGVLVAKVRVMRNILIPMLDIMQTMPSFVYLIPAIMLFGLG----KVPAVL 178

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             I      ++     G      +  E A +F  +  +    + LP   P  + G     
Sbjct: 179 ATIIYGVPPLIRLTSLGIRQVDQEVVEAALAFGSSSRQILFGVELPLAVPTILAGLNQTI 238

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +VS +           GLG  + E  +     + +   + +    + L+R 
Sbjct: 239 MMSLSMVVVSSMIG-------ARGLGQQVLEGIQTLDVGKGLEAGVGIVILAVVLDRI 289


>gi|323701553|ref|ZP_08113226.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
 gi|323533562|gb|EGB23428.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
          Length = 279

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 93/231 (40%), Gaps = 16/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +I +  ++   +    +       + + L++    +    T   +L+A  IS+       
Sbjct: 55  LILLFTLIAWRLGRLPIALFTCGGLFLILNMGY-WENTMETLALVLTAAAISIFIGIPTG 113

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A+   +  ++ P LD MQ++P   +L   + +F     GKV G   + IFA+     
Sbjct: 114 ILCARKNSVCNLVTPALDFMQTMPAFVYLIPAIFFFGL---GKVPGVIASVIFAMP---- 166

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +  +P +L E + +F  +  QK   + +P + P ++  +   +      V
Sbjct: 167 -PTIRLTNLGIRQVPAELVEAADAFGSTPAQKLLKVQLPLAKPTIMAGINQCIMLALSMV 225

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + MI          G+G+ +  A+ +  +     A L ++ +  + D++
Sbjct: 226 VIASMI-------GAKGLGADVYRAVTQIKIGEGFEAGLAIVILAIMLDRM 269



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 16/226 (7%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGI 406
           +  +   IAW+     +  FT   +  ++ +G       T+  V+    I+  I IP GI
Sbjct: 55  LILLFTLIAWRLGRLPIALFTCGGLFLILNMGYWENTMETLALVLTAAAISIFIGIPTGI 114

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               +  + + + P    +   PA V+    +       +   +   +          + 
Sbjct: 115 LCARKNSVCNLVTPALDFMQTMPAFVYLIPAIFFFGLGKVPGVIASVIF----AMPPTIR 170

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G    P +  E A +F  T  +    + LP   P  + G       A +  +++ +
Sbjct: 171 LTNLGIRQVPAELVEAADAFGSTPAQKLLKVQLPLAKPTIMAGINQCIMLALSMVVIASM 230

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                      GLGA +  +  +    E     L +    + L+R 
Sbjct: 231 IG-------AKGLGADVYRAVTQIKIGEGFEAGLAIVILAIMLDRM 269


>gi|217976954|ref|YP_002361101.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502330|gb|ACK49739.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 286

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 18/260 (6%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +LV  I   L     +    P  I   +        L  +   T LR+ +   + + 
Sbjct: 41  VGALLVWEIAVRLGWAQGRLMPAPSVIASNLAQLAASGDLWLHIRATLLRVGAGFALGVF 100

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA  S     ++ P L  +++IP + ++   +++F           E + I  
Sbjct: 101 AGTTLGVLAGASSLGRALIDPTLQGLRAIPSIAWVPLFILWFGIF--------EASKIAL 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +   ++ ++  + R + E  RSFRL G      +  P  +P  V  +   + 
Sbjct: 153 IAVGVAFPIYLGIFGAILAVDRKIIEAGRSFRLEGVALARRILFPAVLPHYVVALRSGLG 212

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
            GW FVVA+E +   +      G+G  +    +      I+ A+ T   +    D LL  
Sbjct: 213 LGWMFVVAAEFMGASE------GLGYLLVDGQQLGKPAQIIAAIFTFAVLGKATDALLVA 266

Query: 261 --RPMIVWSNKFRLERTTGI 278
              P + W +        G 
Sbjct: 267 ASAPFLRWQDTVGQTSGEGG 286



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 84/271 (30%), Gaps = 17/271 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           ++ V  +           P+ +        +  +       +V  +A+ + W     +  
Sbjct: 4   ADAVSAIDSVASAEPAARPQRWGAASLRLALLGLALPVGALLVWEIAVRLGWAQGRLMPA 63

Query: 370 HFTYQDVLYVIWLGC-------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                  L  +            T+ RV     +       +G+  G      + I P  
Sbjct: 64  PSVIASNLAQLAASGDLWLHIRATLLRVGAGFALGVFAGTTLGVLAGASSLGRALIDPTL 123

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q L A P+  + PL +     +  +       L+  G  + I   +     A      E 
Sbjct: 124 QGLRAIPSIAWVPLFILWFGIFEASK----IALIAVGVAFPIYLGIFGAILAVDRKIIEA 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             SF + G    R I+ P + P+YV    +  G  W   + +E          + GLG  
Sbjct: 180 GRSFRLEGVALARRILFPAVLPHYVVALRSGLGLGWMFVVAAEFMG------ASEGLGYL 233

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +  + G   +++  +        A +  L
Sbjct: 234 LVDGQQLGKPAQIIAAIFTFAVLGKATDALL 264


>gi|218779567|ref|YP_002430885.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
 gi|218760951|gb|ACL03417.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
          Length = 277

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A  T   +LSA++   L       LA +S +    L P LD MQ+ P   +L   
Sbjct: 85  GLWADAMTTLAMVLSAVIFCTLVGAPLGILAGRSDKFESWLRPFLDAMQTTPAFVYLVPI 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F     G V G     +FA+       +       +  +  +L E +++F  + WQ 
Sbjct: 145 VMLFSV---GNVAGVLSTIVFAMP-----PIIRLTSLGIRGVHPELVEAAQAFGATNWQV 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++      VV + +I  G       G+GS + L +   D+ 
Sbjct: 197 LVRVQIPLALPTILAGLNQTIMMALSMVVIAALIGAG-------GLGSPVILGLNTLDIG 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             +   L ++ +  + D++
Sbjct: 250 QAVIGGLGIVLMAIILDRI 268



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 76/207 (36%), Gaps = 11/207 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           + V    +  +L +      T+  V+  +I  +++  P+GI  G      S ++PF   +
Sbjct: 73  FSVVTMVFIGMLGLWADAMTTLAMVLSAVIFCTLVGAPLGILAGRSDKFESWLRPFLDAM 132

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA V+   +V   S  ++   L   +         I+     G      +  E A +
Sbjct: 133 QTTPAFVYLVPIVMLFSVGNVAGVLSTIVF----AMPPIIRLTSLGIRGVHPELVEAAQA 188

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  T W+    + +P   P  + G       A +  +++ +   G       GLG+ +  
Sbjct: 189 FGATNWQVLVRVQIPLALPTILAGLNQTIMMALSMVVIAALIGAG-------GLGSPVIL 241

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572
                   + V+G L +    + L+R 
Sbjct: 242 GLNTLDIGQAVIGGLGIVLMAIILDRI 268


>gi|15597523|ref|NP_251017.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107101772|ref|ZP_01365690.1| hypothetical protein PaerPA_01002817 [Pseudomonas aeruginosa PACS2]
 gi|218891698|ref|YP_002440565.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254235335|ref|ZP_04928658.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719]
 gi|9948362|gb|AAG05715.1|AE004659_1 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126167266|gb|EAZ52777.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719]
 gi|218771924|emb|CAW27703.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 254

 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 92/220 (41%), Gaps = 13/220 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY---VIWLGCITMFRVVVLIIIASI 399
           +  ++W  V    A               +  ++L    +     +++ RV++ + +A +
Sbjct: 18  LFALWWLGVALFGAADGLSARFSPQATLLSLGELLERRELYEHVLVSLKRVLLGLFLALL 77

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+G+ +G   ++ +   P  Q L       + P+ V  +       +  +  L+ F 
Sbjct: 78  VGVPLGLLVGASRNLEAATTPAFQFLRMISPLSWMPIAVMLMGVG----DQPIYFLLAFA 133

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             W IL N  AG       + +++ S   T W   R +ILPGI  + +TG   A G  W 
Sbjct: 134 ALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIGILWI 193

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
             +  E+         + GLG YI ++ ++ ++ E++  V
Sbjct: 194 VLVPCEMLG------VSAGLGYYILDTRDRLAYSELMAMV 227



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 79/222 (35%), Gaps = 14/222 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L A   +   +     G+     P+  +  +   L+   L ++   +  R+L  + ++LL
Sbjct: 18  LFALWWLGVALFGAADGLSARFSPQATLLSLGELLERRELYEHVLVSLKRVLLGLFLALL 77

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   SR L     P    ++ I  L ++   V+             +    F 
Sbjct: 78  VGVPLGLLVGASRNLEAATTPAFQFLRMISPLSWMPIAVMLMGVG--------DQPIYFL 129

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  + +W +  +    +  +     ++SRS   + W+    + +P  +  ++  + +++ 
Sbjct: 130 LAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAIG 189

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             W  +V  EM+ V        G+G YI           ++ 
Sbjct: 190 ILWIVLVPCEMLGVSA------GLGYYILDTRDRLAYSELMA 225


>gi|303246590|ref|ZP_07332868.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302491930|gb|EFL51808.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 278

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    T + +L + VI+         LAA     G +++P+LD MQ++P   +L   
Sbjct: 86  GLWEPTISTIILVLFSTVIATSIGVPLGILAAMRPGWGRIIMPLLDFMQTMPAFVYLIPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F            ++AIF+     +          +  +P  L E + +F  +  Q+
Sbjct: 146 IPFFGLG--------PVSAIFSTVIFAMPPAIRLTCLGIRQVPESLTEAADAFGATRMQR 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++      VV + MI          G+G  +  AI+  +  
Sbjct: 198 LRKVELPLALPTIMAGINQTIMLSLSMVVIAAMI-------GARGLGGEVWKAIQRLEPG 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
               A L ++ V  + D++
Sbjct: 251 LGFEAGLAVVIVAVILDRV 269



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 12/227 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
                V+  +A  +  + IG + +   T    L +      T+  V+   +IA+ I +P+
Sbjct: 53  WALIIVIAILAWRLGSRRIGLLALFGLTLVWDLGLWEPTISTIILVLFSTVIATSIGVPL 112

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI    RP     I P    +   PA V+    +  + ++ L P   +   +IF     I
Sbjct: 113 GILAAMRPGWGRIIMPLLDFMQTMPAFVYL---IPAIPFFGLGPVSAIFSTVIFAMPPAI 169

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G    P    E A +F  T  +  R + LP   P  + G       + +  +++
Sbjct: 170 RL-TCLGIRQVPESLTEAADAFGATRMQRLRKVELPLALPTIMAGINQTIMLSLSMVVIA 228

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +           GLG  + ++ ++          L +    + L+R
Sbjct: 229 AMIG-------ARGLGGEVWKAIQRLEPGLGFEAGLAVVIVAVILDR 268


>gi|288961711|ref|YP_003452021.1| glycine betaine/proline transport system permease protein
           [Azospirillum sp. B510]
 gi|288913991|dbj|BAI75477.1| glycine betaine/proline transport system permease protein
           [Azospirillum sp. B510]
          Length = 294

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 101/240 (42%), Gaps = 16/240 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVI 78
           F L+     + I  I+   +    V   +  +  + L V   L    + T   +L++ ++
Sbjct: 42  FVLVGAPAWLLIGLIVAVSLWRVGVGFAVFTVASLLLIVGMGLWAETASTLGLVLTSTLL 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            LL         A++R +  ++   LD MQ++P   +L   V++F     G+V G     
Sbjct: 102 CLLAGVPLGVWMARNRVVESIVRTTLDFMQTMPAFVYLIPAVMFFGL---GRVPGILATV 158

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+  +            +  +P ++ E  ++F     Q  + + +P ++P ++  +  
Sbjct: 159 IFAMPPA-----VRLTALGIQQVPAEIVEAGKAFGCHDRQLLFKVQLPNALPSIMAGVNQ 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +M      +V + MI  G       G+G+ +   I+  D+     + L+++ +  + D++
Sbjct: 214 TMMMALSMIVIASMIGAG-------GLGNVVLQGIQRLDIALGFESGLSVVLLAIILDRI 266



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 82/241 (34%), Gaps = 16/241 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVV 391
              V ++L      ++ G+ + ++   +G     FT   +L ++ +G       T+  V+
Sbjct: 37  GAAVDFVLVGAPAWLLIGLIVAVSLWRVGVGFAVFTVASLLLIVGMGLWAETASTLGLVL 96

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              ++  +  +P+G+W+     + S ++     +   PA V+    V       +   L 
Sbjct: 97  TSTLLCLLAGVPLGVWMARNRVVESIVRTTLDFMQTMPAFVYLIPAVMFFGLGRVPGILA 156

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +  +             G    P +  E   +F     +    + LP   P  + G  
Sbjct: 157 TVIFAMPPAVRL----TALGIQQVPAEIVEAGKAFGCHDRQLLFKVQLPNALPSIMAGVN 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                A +  +++ +   G       GLG  + +  ++          L +    + L+R
Sbjct: 213 QTMMMALSMIVIASMIGAG-------GLGNVVLQGIQRLDIALGFESGLSVVLLAIILDR 265

Query: 572 F 572
            
Sbjct: 266 I 266


>gi|262281438|ref|ZP_06059219.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202]
 gi|262257264|gb|EEY76001.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202]
          Length = 265

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + I  N 
Sbjct: 95  GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINT 150

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S
Sbjct: 151 YHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS 210

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 211 ------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 106/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I + + P IF ++  ++     +  L   +    P  ++      L    L  +   +  
Sbjct: 15  IGQHLLPWIFPIILLIVWQIASSSGLLESRILPAPTAVISAFWHLLVSGELWHHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALLGLLIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q+L R ++ W + ++
Sbjct: 241 LGKLADVLAQILERYLLRWHSGYQ 264


>gi|15890822|ref|NP_356494.1| ABC transporter, membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium tumefaciens str. C58]
 gi|15159110|gb|AAK89279.1| ABC transporter, membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium tumefaciens str. C58]
          Length = 260

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    ++  R +    I   I    G+  G      S      Q++   P     PL
Sbjct: 57  GELIANIGVSSARALAGFAIGGSIGFIFGLANGLSRFSRSFTDTTLQMIRNIPHLALIPL 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + I  N + G         E+  ++ ++ +  +R 
Sbjct: 117 VILWFGI----DEEAKLFLVALGVFFPIYINTLLGIQGVDPQLVEMGRTYGMSPFTLFRR 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P   TG   A G  W   IV+E  S       ++GLG    ++ E      VV
Sbjct: 173 VILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYMAMQAREFLLIDVVV 226

Query: 557 LGVLIMCCFVLALNRF 572
           L +LI        + F
Sbjct: 227 LSILIYALLGKLADSF 242



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     L    L      ++ R L+   I     F++      SR       
Sbjct: 40  LPAPSAVAEAFWRLLLSGELIANIGVSSARALAGFAIGGSIGFIFGLANGLSRFSRSFTD 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A +F +     + +  +    +  +
Sbjct: 100 TTLQMIRNIPHLALIPLVILWFGID--------EEAKLFLVALGVFFPIYINTLLGIQGV 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R++ +S +  F  + +P ++P +   +  ++   W  ++ +E I        
Sbjct: 152 DPQLVEMGRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETISSSS---- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G     A +   +  ++ ++L    +  L D   + L    + W   F+
Sbjct: 208 --GLGYMAMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAFK 258


>gi|209516849|ref|ZP_03265699.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502665|gb|EEA02671.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 288

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 10/235 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +R H P    +          L +    V   +       +   I           +  
Sbjct: 26  PLRAHDPLRPWRYAGLALPVVFLAVVEVLVRASILPMHLVPAPSAIARTLWDLGAARLAR 85

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ RV     I + + + VG  +G    + + + P  Q L A P+  + P+++  +
Sbjct: 86  HIGASVIRVYGGFAIGAALALLVGAAMGLSRRVDALLDPAFQALRAIPSLAWVPILLLWM 145

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  +V+AG         E      ++G   +  I+LP 
Sbjct: 146 GI----DEAPKITLIAIGAFFPVQLSVVAGIHGVDRKLIEFGQLNRLSGRALFTRILLPA 201

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   TG  T    AW   + +E+ +       T GLG  +++  E G    V 
Sbjct: 202 SMPQIFTGLRTGLSLAWMFMVAAELIA------ATRGLGYLLSDGRETGRPDLVF 250



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 18/239 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQ 63
           P      + P  +  LA  +V   +  +L                +      L    L +
Sbjct: 26  PLRAHDPLRPWRYAGLALPVVFLAVVEVLVRASILPMHLVPAPSAIARTLWDLGAARLAR 85

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   + +R+     I      +       SRR+  +L P    +++IP L ++   +++ 
Sbjct: 86  HIGASVIRVYGGFAIGAALALLVGAAMGLSRRVDALLDPAFQALRAIPSLAWVPILLLWM 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E   I  I     + +  S+   +  + R L E  +  RLSG   F  +
Sbjct: 146 GID--------EAPKITLIAIGAFFPVQLSVVAGIHGVDRKLIEFGQLNRLSGRALFTRI 197

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            +P SMP +   +   +S  W F+VA+E+I          G+G  ++   +      + 
Sbjct: 198 LLPASMPQIFTGLRTGLSLAWMFMVAAELIA------ATRGLGYLLSDGRETGRPDLVF 250


>gi|56962846|ref|YP_174572.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56909084|dbj|BAD63611.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 278

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D          T   +L+A +IS++       L AK+ R   ++ P+LD MQ++P   +
Sbjct: 81  IDSLGFWNGMLDTLALVLTACLISVVIGVPVGILMAKNDRTEAIIKPVLDFMQTMPAFVY 140

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V +F     G V G   + IFA+               +  +  +L E + +F  +
Sbjct: 141 LIPAVAFFG---IGMVPGVVASVIFAMP-----PTVRMTNLGIRQVSTELIEAADAFGST 192

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G QK + + +P +   ++  +  S       VV + MI          GIG  +  A+ +
Sbjct: 193 GTQKLFKVQLPMARGTIMAGINQSTMLALSMVVIAAMI-------GATGIGQVVYSAVGQ 245

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            ++       + ++ +  + D+L
Sbjct: 246 NNIGNGFEGGIAIVILAIILDRL 268



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 11/270 (4%)

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
            ++       ++        I F   +    +     +                    W 
Sbjct: 10  GSWVEAFVEWLQHAAWFFNGIDFTIEKVMDGIYWIIALPPSWLFVLIIAALTYWTNRKWG 69

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
              +++      D L        T+  V+   +I+ +I +PVGI +       + I+P  
Sbjct: 70  LTVFVILGLLLIDSLGFWNGMLDTLALVLTACLISVVIGVPVGILMAKNDRTEAIIKPVL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +   PA V+    V+      +   +   +          +     G      +  E 
Sbjct: 130 DFMQTMPAFVYLIPAVAFFGIGMVPGVVASVIF----AMPPTVRMTNLGIRQVSTELIEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +F  TG +    + LP      + G   +   A +  +++ +          TG+G  
Sbjct: 186 ADAFGSTGTQKLFKVQLPMARGTIMAGINQSTMLALSMVVIAAMIG-------ATGIGQV 238

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +  + +      G + +    + L+R 
Sbjct: 239 VYSAVGQNNIGNGFEGGIAIVILAIILDRL 268


>gi|302557820|ref|ZP_07310162.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
 gi|302475438|gb|EFL38531.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000]
          Length = 296

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 104/257 (40%), Gaps = 11/257 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            + +++ P +    A + V  ++  + L   +    PR + D         +L      +
Sbjct: 41  VLRQKVAPPLLGAAAVLTVWQLLHTLRLVSEERLPSPRAVGDSFLTLWRQGTLFDIVWTS 100

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L   + +L        + A+   +   L P+L  +QS+P + ++   +++F     
Sbjct: 101 LERGLLGFLAALAIGTPLGLVVARVPVVRATLSPVLSGLQSLPSVAWVPAAIIWFGL--- 157

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 + A    I    V ++   +   +  +P       R+   +G +   Y+ +P +
Sbjct: 158 -----TDTAMYTVILLGAVPSIAVGLVSGIDQVPPLYLRAGRTIGATGLRGARYIVLPAA 212

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PG    +    +  W  ++A+E+I     +    G+G Y+A + +  DL  + + +L +
Sbjct: 213 LPGYTAGLKQGWAFSWRSLMATELIASSPDLGV--GLGRYLANSREAIDLPGVFFGILLI 270

Query: 249 LGVIFLYDQLLFRPMIV 265
           L V  L D L+F P+  
Sbjct: 271 LAVGVLIDLLVFSPLER 287



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 6/209 (2%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T      +  +   ++ R ++  + A  I  P+G+ +   P + + + P    L + P+
Sbjct: 85  LTLWRQGTLFDIVWTSLERGLLGFLAALAIGTPLGLVVARVPVVRATLSPVLSGLQSLPS 144

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P  +             +  +++ G    I   +++G    P  +     +   TG
Sbjct: 145 VAWVPAAIIWFGLTDT----AMYTVILLGAVPSIAVGLVSGIDQVPPLYLRAGRTIGATG 200

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R  RYI+LP   P Y  G       +W + + +E+ +         GLG Y+A S E  
Sbjct: 201 LRGARYIVLPAALPGYTAGLKQGWAFSWRSLMATELIASSPDLGV--GLGRYLANSREAI 258

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             P V  G+L++    + ++  ++ PL  
Sbjct: 259 DLPGVFFGILLILAVGVLIDLLVFSPLER 287


>gi|23500215|ref|NP_699655.1| taurine ABC transporter permease [Brucella suis 1330]
 gi|62317665|ref|YP_223518.1| taurine ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|83269648|ref|YP_418939.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|148558660|ref|YP_001257443.1| putative taurine ABC transporter permease [Brucella ovis ATCC
           25840]
 gi|189022914|ref|YP_001932655.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|254691161|ref|ZP_05154415.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 6 str. 870]
 gi|254698945|ref|ZP_05160773.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702857|ref|ZP_05164685.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|254706021|ref|ZP_05167849.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254711679|ref|ZP_05173490.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254712291|ref|ZP_05174102.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254715362|ref|ZP_05177173.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|254732391|ref|ZP_05190969.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|256029687|ref|ZP_05443301.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256157840|ref|ZP_05455758.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|256253198|ref|ZP_05458734.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
 gi|256256347|ref|ZP_05461883.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 9 str. C68]
 gi|260167223|ref|ZP_05754034.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. F5/99]
 gi|260544898|ref|ZP_05820719.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|261756627|ref|ZP_06000336.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|23463818|gb|AAN33660.1| taurine ABC transporter, permease protein, putative [Brucella suis
           1330]
 gi|62197858|gb|AAX76157.1| hypothetical taurine ABC transporter, permease protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939922|emb|CAJ12935.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|148369945|gb|ABQ62817.1| putative taurine ABC transporter, permease protein [Brucella ovis
           ATCC 25840]
 gi|189021488|gb|ACD74209.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|260098169|gb|EEW82043.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|261736611|gb|EEY24607.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
          Length = 272

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|182434807|ref|YP_001822526.1| putative sulfonate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178463323|dbj|BAG17843.1| putative sulfonate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 292

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L        L        P ++   V        LP   + +  R    +VI L 
Sbjct: 51  VVLLALWWAASATGLLTADVLASPAEVFRAVGELWGNGQLPDALTTSLTRSGLGLVIGLA 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   +R    +L   L  +++IP L  +   +V+F           E A I  
Sbjct: 111 AGLALGIVTGFTRLGDELLDSSLQTLRTIPFLSLVPLFMVWFGIN--------ETAKILL 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  S    +      L E  R+F +S       + +P ++P L+  + +SM+
Sbjct: 163 IAVATTFPMYVSTSSGVRTTDPKLIEAMRAFGMSRLGIVRQVVLPGALPSLLAGLRLSMT 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                ++A+E I          GIG  ++ A        +   +L    +    D   +L
Sbjct: 223 LSVIALIAAEEI------NATAGIGYLMSQAQSYARTDILAVCILVYGLLGLTADVLVRL 276

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 277 LERVLMPW 284



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 11/263 (4%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
               L      +R      +           +L ++W     G+       S   +    
Sbjct: 22  PPSGLVTPRPHLRSPRSRPYALTVRALGPVVLLALWWAASATGLLTADVLASPAEVFRAV 81

Query: 372 T-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +      ++ R  + ++I     + +GI  GF       +    Q L   P 
Sbjct: 82  GELWGNGQLPDALTTSLTRSGLGLVIGLAAGLALGIVTGFTRLGDELLDSSLQTLRTIPF 141

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL +               LL+   T + +  +  +G         E   +F ++ 
Sbjct: 142 LSLVPLFMVWFGI----NETAKILLIAVATTFPMYVSTSSGVRTTDPKLIEAMRAFGMSR 197

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R ++LPG  P  + G   +   +  A I +E  +       T G+G  ++++    
Sbjct: 198 LGIVRQVVLPGALPSLLAGLRLSMTLSVIALIAAEEIN------ATAGIGYLMSQAQSYA 251

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               + + +L+     L  +  +
Sbjct: 252 RTDILAVCILVYGLLGLTADVLV 274


>gi|167836748|ref|ZP_02463631.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 272

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +V   I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 74  VSTWRALVGFAIGGGVGLALGLATGLSKTAEVALDSTIQMIRNIPALAMIPLVILWFGI- 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   D  E+A S+ + G+  +R +ILPG  P
Sbjct: 133 ---DENAKLFLVALGVFFPVYINTYHGIRSVDADLVEMARSYGVRGFALYRDVILPGALP 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 190 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 243

Query: 565 FVLALNRF 572
                +  
Sbjct: 244 LGKLADVL 251



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       ++   +      +T R L    I              S+   + L 
Sbjct: 49  LPEPFAVARAAWTLVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKTAEVALD 108

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 109 STIQMIRNIPALAMIPLVILWFGID--------ENAKLFLVALGVFFPVYINTYHGIRSV 160

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 161 DADLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 215 QSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRWHPAYQ 267


>gi|126726789|ref|ZP_01742629.1| Glycine betaine/L-proline transport system permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126704118|gb|EBA03211.1| Glycine betaine/L-proline transport system permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 513

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +V+  + ILL  +                + +    + A  T   + +A  +S+L     
Sbjct: 291 IVVASLIILLTWLTAGVRTAIWSGAFLAYIGLLGFWEKAMTTLALLGTAACLSILIGIPL 350

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+ +R   ++ PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 351 GMFCARRKRFYAMIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 402

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + +F  + W     + +P + P +   +  ++      
Sbjct: 403 GTPVVRLTVLGLRGVPESVREAAIAFGANKWFLLTRVDLPLASPSIRAGINQTIMLSLAM 462

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 463 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    ++    +    ++  +      Y  +L        T+  +     ++ +
Sbjct: 286 VSTPWIVVASLIILLTWLTAGVRTAIWSGAFLAYIGLLGFWEKAMTTLALLGTAACLSIL 345

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   R    + IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 346 IGIPLGMFCARRKRFYAMIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 402

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A +F    W     + LP   P    G       +  
Sbjct: 403 GT-PVVRLTVLGLRGVPESVREAAIAFGANKWFLLTRVDLPLASPSIRAGINQTIMLSLA 461

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 462 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508


>gi|239834712|ref|ZP_04683040.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822775|gb|EEQ94344.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 273

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+V+   +   + + +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 84  SLRRLVIGASLGIAVGVGLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 141

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF +  W   R IILPG FP 
Sbjct: 142 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLVRMGQSFGLGWWSIVRKIILPGAFPA 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +        + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 200 ILSGLRVSISIGIILLVAAEMLG------AQFGVGSYILEAGSLYDLEKLFAGVTILSVM 253

Query: 566 VLALN 570
            L +N
Sbjct: 254 GLIVN 258



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 58  LPRPSAVLETFVQLWQTGLLWQHLLPSLRRLVIGASLGIAVGVGLGVMIGLFSYVRAGLV 117

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 118 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF L  W     + +P + P ++  + +S+S G   +VA+EM+        
Sbjct: 170 DRSLVRMGQSFGLGWWSIVRKIILPGAFPAILSGLRVSISIGIILLVAAEMLG------A 223

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+GSYI  A    DL  +   +  +  +  + + ++ +
Sbjct: 224 QFGVGSYILEAGSLYDLEKLFAGVTILSVMGLIVNFIIGQ 263


>gi|104774103|ref|YP_619083.1| glycine betaine ABC transporter, substrate binding / permease
           protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514172|ref|YP_813078.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423184|emb|CAI97982.1| Glycine betaine ABC transporter, substrate binding / permease
           protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093487|gb|ABJ58640.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325125864|gb|ADY85194.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 506

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 20/209 (9%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I  I+     + Q      L  + A+++S L       L A S+R G V+  I  I+Q+I
Sbjct: 5   INTISSHQGQIWQALGEHLLLSMEALLLSCLIAIPLGMLLAHSKRAGEVVFQITSIIQTI 64

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   + +               A+ A+    +  +  + Y +L NI  +LEE + 
Sbjct: 65  PSLALLGLLIPFVGIGMTP--------ALIALTAYGIMPIYQNTYSALRNIDPNLEEAAD 116

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +F LS W+K   L  P ++P  +  + +S+         + MI  G       G+G+YI 
Sbjct: 117 AFGLSRWKKLSRLEFPMALPMTLSGVSISLVMIIGTATLAAMIGAG-------GLGTYIM 169

Query: 231 LAIKEQD-----LLAILYAMLTMLGVIFL 254
           + I++ +     + A L A+LT+     L
Sbjct: 170 IGIQQNNNTYLLIGAGLSAVLTLAMSGLL 198



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +I IP+G+ +         +     ++   P+     L++  V        + L+   
Sbjct: 33  SCLIAIPLGMLLAHSKRAGEVVFQITSIIQTIPSLALLGLLIPFVGIGMTPALIALTAYG 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I      I  N  +       + +E A +F ++ W+    +  P   P  ++G   +   
Sbjct: 93  IM----PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALPMTLSGVSISLVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
               + ++ +   G       GLG YI    ++ +   +++G  +     LA++  L   
Sbjct: 149 IIGTATLAAMIGAG-------GLGTYIMIGIQQNNNTYLLIGAGLSAVLTLAMSGLL--K 199

Query: 577 LYLYGTRCLRL 587
                 +  R+
Sbjct: 200 FMASSKKHFRV 210


>gi|288960217|ref|YP_003450557.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288912525|dbj|BAI74013.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 281

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
             +    P  I+  + +      L  +   T  R+    +  +L   +   L        
Sbjct: 56  NGRLLPPPSRILSTLWVLAKSGDLSVHILATLGRVGLGFLSGVLAGTLLGALTGYLTVAR 115

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +  P L  +++IP + ++   +++F           E + I  I     + +  ++  +
Sbjct: 116 RLFDPTLQALRAIPSIAWVPLFILWFGIF--------ETSKIILIAVGVFFPIYLALSGA 167

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  + R L EV R FR+SG +  W + +P ++P  +  +   +  GW FVVA+E +   +
Sbjct: 168 IQGVDRKLVEVGRIFRMSGVELVWRILLPATLPSYLLALRAGLGLGWMFVVAAEFMGASE 227

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLE 273
                 G+G  +           IL ++L    +  L D LL    RP++ W + F+ +
Sbjct: 228 ------GLGFLLTDGQMTGQPQTILASILAFAVLGKLSDGLLAALSRPLLRWQDSFKPD 280



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ RV +  +   +    +G   G+         P  Q L A P+  + PL +     
Sbjct: 84  LATLGRVGLGFLSGVLAGTLLGALTGYLTVARRLFDPTLQALRAIPSIAWVPLFILWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +  +      +L+  G  + I   +            EV   F ++G      I+LP   
Sbjct: 144 FETSK----IILIAVGVFFPIYLALSGAIQGVDRKLVEVGRIFRMSGVELVWRILLPATL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P Y+       G  W   + +E          + GLG  + +    G    ++  +L   
Sbjct: 200 PSYLLALRAGLGLGWMFVVAAEFMG------ASEGLGFLLTDGQMTGQPQTILASILAFA 253

Query: 564 CFVLALNRFL 573
                 +  L
Sbjct: 254 VLGKLSDGLL 263


>gi|158335979|ref|YP_001517153.1| ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158306220|gb|ABW27837.1| ABC transporter, permease protein, putative [Acaryochloris marina
           MBIC11017]
          Length = 290

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 102/269 (37%), Gaps = 15/269 (5%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F+    +    L   L V+    P  F  L +        D+    +     +G A+  +
Sbjct: 24  FWRIAEDIPPGLSWLLMVLSVAVPLTFWWLLAT-----YGDVNPAFLPSPGKVGTAFVDL 78

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +  +    +D   +     ++ FRV    ++ASI+ +P+GI +G    + S  +P   +
Sbjct: 79  WHQYDTLNQKDTYPLFQATLMSCFRVGSGFLLASILAVPMGIGMGAFASLRSLGEPIIGI 138

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA  F PL++  +             L+  GT ++ +  ++      P +  E   
Sbjct: 139 VRYMPAPAFIPLLLIYLGLE----EEPKIALIFIGTIFFNVLMIMDAVKFVPKELIETTY 194

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +      +    +I P + P  +         +WN  +V+E+ +         GLG  I 
Sbjct: 195 TLGGNRTQVLLQVITPYVIPRIIDAFRVNMAASWNLVVVAELVA------ADEGLGKRIL 248

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +    S  ++ + ++++     +L+ F 
Sbjct: 249 LAQRFNSVDKIFVCLIVLGLLGFSLDLFF 277



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 87/213 (40%), Gaps = 15/213 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    +  R+ S  +++ +              L  +  PI+ I++ +P   F+   +
Sbjct: 93  LFQATLMSCFRVGSGFLLASILAVPMGIGMGAFASLRSLGEPIIGIVRYMPAPAFIPLLL 152

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +Y            E   I  IF   ++     +  ++  +P++L E + +   +  Q  
Sbjct: 153 IYLGLE--------EEPKIALIFIGTIFFNVLMIMDAVKFVPKELIETTYTLGGNRTQVL 204

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P+ +P ++    ++M+  W  VV +E++   +      G+G  I LA +   +  
Sbjct: 205 LQVITPYVIPRIIDAFRVNMAASWNLVVVAELVAADE------GLGKRILLAQRFNSVDK 258

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           I   ++ +  + F  D L FR +   + ++ +E
Sbjct: 259 IFVCLIVLGLLGFSLD-LFFRWLQHVTCRWAIE 290


>gi|325525220|gb|EGD03088.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 137

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 59/127 (46%), Positives = 90/127 (70%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P   DL A ++V+G + +     ++   P  +     I+L   +LP Y  RT  RM +A+
Sbjct: 11  PGWRDLAAMLIVVGFLLLAGISARQMGGPLAVAHPPAISLSPAALPGYTLRTVARMFAAL 70

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + S++FTFVYAT AA+SRR   VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GAE 
Sbjct: 71  LASIVFTFVYATTAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGAEC 130

Query: 137 AAIFAIF 143
           AAIFAIF
Sbjct: 131 AAIFAIF 137


>gi|170701695|ref|ZP_02892635.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170133388|gb|EDT01776.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 323

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 101/312 (32%), Gaps = 29/312 (9%)

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM--L 344
            L R+ +      +++    +       +  +         P +  +L    + + +   
Sbjct: 19  TLHRQDDMSTQDSWAADRAPADFEERDARAAQRRHTAHPARPSHRYRLPGQGKTAALSTA 78

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVV 392
            I    V+  VA  + W    ++             W G I            +  RV  
Sbjct: 79  TIAALAVLWWVATHLQWLPPLFLPAPEAVWTAFVDAWHGRIQGGLPLSDHLLWSAARVFG 138

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++A+ I +P GI +G        + P  +     P   + PLVV              
Sbjct: 139 AFVLATAIGVPAGILMGVSLVARGVLDPLLEFYRPLPPLAYLPLVVIWFGI----DETAK 194

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++       I     AG  A   +    A S   +  +  R+++LP   P  +TG   
Sbjct: 195 LVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPEILTGLRI 254

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+       +  
Sbjct: 255 AIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAIAWLFDLA 308

Query: 573 LWHPLYLYGTRC 584
           +      +  R 
Sbjct: 309 M-----RWVERR 315



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+  A V++         L   S     VL P+L+  + +P L +L   V
Sbjct: 125 LSDHLLWSAARVFGAFVLATAIGVPAGILMGVSLVARGVLDPLLEFYRPLPPLAYLPLVV 184

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 185 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 236

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 237 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 290

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 291 VVMGILIIGAIAWLFDLAMRWVERRVVPWKGR 322


>gi|330810520|ref|YP_004354982.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378628|gb|AEA69978.1| putative Glycine betaine ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 282

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 94/240 (39%), Gaps = 18/240 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+ LA + V  ++   +      T+   +  ++   L      Q    T  ++  A ++
Sbjct: 49  WFNPLALIAVFALLAYYIQRKASLTLFVTLSFLLIFNL---GYWQETMETLAQVTFATLV 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++       +AA        L P+LD+MQ++P   +L  T+  F     G V G     
Sbjct: 106 CVVIGVPLGIVAAHRPWFYAALRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTV 162

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FAI            Y  + ++P +L +  ++F  S  Q    + +P +MP +   +  
Sbjct: 163 VFAIAAP-----IRLTYLGIRDVPDELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQ 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + ++          G+G  +  A+   D+     A L ++ +  + D++
Sbjct: 218 CIMLSLSMVVIAALV-------GADGLGKPVVNALNTADISMGFEAGLAIVLLAIILDRI 270



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 86/273 (31%), Gaps = 19/273 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           PL  ++ +    L        +      S    ++   + WF  +  +A+          
Sbjct: 9   PLGEHIARYVEWLTQHGAGVFDAISLSLSGVISAFTSALLWFNPLALIAVFALLAYYIQR 68

Query: 368 VNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
               T    L  + +           T+ +V    ++  +I +P+GI    RP   + ++
Sbjct: 69  KASLTLFVTLSFLLIFNLGYWQETMETLAQVTFATLVCVVIGVPLGIVAAHRPWFYAALR 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   L+   P  V+    +  ++ + L     L   ++F     I      G    P++ 
Sbjct: 129 PVLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPDEL 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   +F  +  +    I LP   P    G       + +  +++ +           GL
Sbjct: 185 MDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGL 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +  +             L +    + L+R 
Sbjct: 238 GKPVVNALNTADISMGFEAGLAIVLLAIILDRI 270


>gi|326383684|ref|ZP_08205369.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197448|gb|EGD54637.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 289

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 83/294 (28%), Gaps = 18/294 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +   +     P    +                +  +         +    W  +  G  +
Sbjct: 1   MSTPTIAAAPPAQRPLDMPVTPTADPGHRGGHSARRWALRVATVLVAVGVWQLLAAGDVV 60

Query: 358 GIAWQSIGYIVNHFTYQDVLYV-----IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                                +           ++ R+     +A+++ +P+GI +G   
Sbjct: 61  FWLHFDTVPSPTEVASAWWARLHTDAYYIDIAQSLIRIGSGFALAAVVGVPLGIALGRSQ 120

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                +    +L    PA    P+ +        +    +  +      + I+ +     
Sbjct: 121 AAGDTVGTLTELARPIPAIALVPIAILVFP----SDESGMVFITCVAAVFPIIVSTRHAV 176

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            A P  ++E   +   T       +ILPGI P    G     G AW   I +E+ S    
Sbjct: 177 RALPTIWEESVLTMGGTRRDVLLRVILPGITPGVFGGLSVGIGVAWICLISAEMVSGRL- 235

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL---NRFLWHPLYLYGTR 583
                G+G    +S     +P V +G+  +     A       +   +  +  R
Sbjct: 236 -----GIGYQTWQSYTVVDYPGVFVGMFTIAALGAATSGAIELIGRRITRWLPR 284



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 82/230 (35%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P ++       L   +     +++ +R+ S   ++ +          +S+  G  +  
Sbjct: 69  PSPTEVASAWWARLHTDAYYIDIAQSLIRIGSGFALAAVVGVPLGIALGRSQAAGDTVGT 128

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + ++ + IP +  +   ++ F +   G         +F    + V+ +  S   ++  +P
Sbjct: 129 LTELARPIPAIALVPIAILVFPSDESGM--------VFITCVAAVFPIIVSTRHAVRALP 180

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
              EE   +   +       + +P   PG+   + + +   W  ++++EM+         
Sbjct: 181 TIWEESVLTMGGTRRDVLLRVILPGITPGVFGGLSVGIGVAWICLISAEMVSG------R 234

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNK 269
            GIG     +    D   +   M T+  +        +L+ R +  W  +
Sbjct: 235 LGIGYQTWQSYTVVDYPGVFVGMFTIAALGAATSGAIELIGRRITRWLPR 284


>gi|297172841|gb|ADI23804.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF4000_47G05]
          Length = 448

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 119/351 (33%), Gaps = 39/351 (11%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +  ++ IL  G  +   P                   A  T   M  ++ I+     +
Sbjct: 108 LALFCVVAILFWGATDMWDP-------------------AMETLSLMFVSVAIASTLGIL 148

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A++S R+     PILD MQ++P   +LT  + +F    P         AI A+   
Sbjct: 149 IGIAASQSNRVDAWTRPILDTMQTLPGFVYLTPAIFFFGIGGPP--------AIIAVVIY 200

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +          +  +P +  E +RSF  +  Q  + + +P ++P ++  +  ++     
Sbjct: 201 ALPPAARLTNLGIRQVPSETIEAARSFGSTSRQLLFKVKLPLALPSILMGVNQTIMMALG 260

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            VV +  I          G+G  +  A++  ++   +   L+++ +  ++D+     +  
Sbjct: 261 LVVLAAFIGAA-------GLGYEVWQALRRLNIGWGIEGGLSIVFMAIMFDR-----ISG 308

Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325
               +R   +         +      T + +         FS  +   ++  R +  +  
Sbjct: 309 AIGSYRHRNSAAQEERFRLLPARLVNTPWAQRFENMLGRLFSIFAILSQRFARFVAAVFQ 368

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              +      + +  +Y L   +  +   + + +       +       D 
Sbjct: 369 FVLQLVSSQVAGRVETYFLRHTFLLMSIALLVTLYLFDAYVLSIGDFPTDW 419



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 79/274 (28%), Gaps = 11/274 (4%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
            +   ++ +   + +++  R +         + L       +     I            
Sbjct: 44  SFPFIDWVNSAQDWLRQNVRGVTRSIAGVIGDSLNAVETFMLDLSWPIVMLGFALPALHY 103

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
              +   + V    +     +      T+  + V + IAS + I +GI       + +  
Sbjct: 104 GGLRLALFCVVAILFWGATDMWDPAMETLSLMFVSVAIASTLGILIGIAASQSNRVDAWT 163

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P    +   P  V+    +               + ++             G    P++
Sbjct: 164 RPILDTMQTLPGFVYLTPAIFFFGIGG----PPAIIAVVIYALPPAARLTNLGIRQVPSE 219

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E A SF  T  +    + LP   P  + G       A    +++             G
Sbjct: 220 TIEAARSFGSTSRQLLFKVKLPLALPSILMGVNQTIMMALGLVVLAAFIG-------AAG 272

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           LG  + ++  + +    + G L +    +  +R 
Sbjct: 273 LGYEVWQALRRLNIGWGIEGGLSIVFMAIMFDRI 306


>gi|320011770|gb|ADW06620.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptomyces flavogriseus ATCC 33331]
          Length = 875

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 88/233 (37%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L++  I  ++       +P     +    +D  +L   A  T   ++ A VI+++    
Sbjct: 48  PLLMAGIFAVIAFWLRGVIPAVATFVGFALIDSLALWDEAMATLSLVVVAAVITIVIAVP 107

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA++ R+   L P+LD+MQ++P   +L   V++F     G   G     +FA+   
Sbjct: 108 TGIWAARNSRVSSALRPVLDVMQTMPAFVYLIPGVMFFGV---GVTPGVIATIVFAMPPG 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  S       + +P ++P ++  +   +     
Sbjct: 165 -----VRMTELGIRQVDSELVEAAEAFGTSPKHTLTRVQLPLALPTIMAGINQVIMLALS 219

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV   M   G            +  AI +  +     + + ++ +    D++
Sbjct: 220 MVVIGGMAGAGGLGEK-------VYAAITQLQVGLAAESGIAVVILAMYLDRM 265



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 6/175 (3%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F V+     G+      ++   F   D L +      T+  VVV  +I  +I +P GIW 
Sbjct: 55  FAVIAFWLRGVIPAVATFV--GFALIDSLALWDEAMATLSLVVVAAVITIVIAVPTGIWA 112

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +SS ++P   ++   PA V+    V           +   +          +   
Sbjct: 113 ARNSRVSSALRPVLDVMQTMPAFVYLIPGVMFFGVGVTPGVIATIVF----AMPPGVRMT 168

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
             G     ++  E A +F  +       + LP   P  + G       A +  ++
Sbjct: 169 ELGIRQVDSELVEAAEAFGTSPKHTLTRVQLPLALPTIMAGINQVIMLALSMVVI 223


>gi|311896718|dbj|BAJ29126.1| putative ABC transporter permease protein [Kitasatospora setae
           KM-6054]
          Length = 261

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     +A+++ +  G+        +  + P  +L+   PA    P+ +       
Sbjct: 63  SLRRISTGFALAALLGVGTGVLTARSRLAADLVGPVLELVRPIPAIALVPVAIMLFP--- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +      + +         A P  ++E   +      R    ++LPG  P 
Sbjct: 120 -ENEQGIVFITCAAAFFPVTVATRHAVRAVPPRWEEAVRTMGGGTGRVLFGVVLPGALPG 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G     G +W   I +E+ S  +      G+G     +     +P V +G+  +   
Sbjct: 179 VVGGLSVGLGVSWICVISAEMVSGQY------GVGYRTWSAYTVLDYPGVFVGMATIGLL 232

Query: 566 VLALN---RFLWHPLYLY 580
             A +     L   L  +
Sbjct: 233 GWATSGAVELLGRRLTRW 250



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 91/224 (40%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            +++D +   L      Q  + +  R+ +   ++ L       L A+SR    ++ P+L+
Sbjct: 41  LEVLDALRAQLGTAVYWQDLADSLRRISTGFALAALLGVGTGVLTARSRLAADLVGPVLE 100

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +++ IP +  +   ++ F           E   +F    +  + +T +   ++  +P   
Sbjct: 101 LVRPIPAIALVPVAIMLF--------PENEQGIVFITCAAAFFPVTVATRHAVRAVPPRW 152

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           EE  R+      +  + + +P ++PG+V  + + +   W  V+++EM+          G+
Sbjct: 153 EEAVRTMGGGTGRVLFGVVLPGALPGVVGGLSVGLGVSWICVISAEMVSG------QYGV 206

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           G     A    D   +   M T+  + +      +LL R +  W
Sbjct: 207 GYRTWSAYTVLDYPGVFVGMATIGLLGWATSGAVELLGRRLTRW 250


>gi|163844631|ref|YP_001622286.1| hypothetical protein BSUIS_B0468 [Brucella suis ATCC 23445]
 gi|163675354|gb|ABY39464.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 272

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + I P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGIVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   +V
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGIV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|297563853|ref|YP_003682826.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296848302|gb|ADH70320.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 287

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R +   ++A    +P+G+ I +   +S  + P  +L     A    P+ V  +   
Sbjct: 94  ASLARALSGFLVAVAAAVPLGVLIAWYRPVSDFLTPILELFRNTAALALLPVFVLVLGIG 153

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+++   + +L N I G         + A+S        +R ++LP   P
Sbjct: 154 EASK----VSLVVYACAFPVLLNTITGVRTVDPLLVKSAASLGFGPLALFRKVVLPASVP 209

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    I +E+          +GLG  +  +       ++  G+L +  
Sbjct: 210 SIFTGVRMAGASSILVLIAAEMVG------SQSGLGYLVNAAQLNFLIHDMYAGILAIAV 263

Query: 565 FVLALNRFL 573
             +ALN  L
Sbjct: 264 VGVALNGVL 272



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           + AF+L+  +   +    +    P   V      L +   L  + S +  R LS  ++++
Sbjct: 48  IAAFLLLWEVAPRVGLLDRVFLPPLTEVLAATRDLALSGQLWNHVSASLARALSGFLVAV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L A  R +   L PIL++ ++   L  L   V+             E + + 
Sbjct: 108 AAAVPLGVLIAWYRPVSDFLTPILELFRNTAALALLPVFVLVLGIG--------EASKVS 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  +  + +  +    +  +   L + + S        F  + +P S+P +   + M+ 
Sbjct: 160 LVVYACAFPVLLNTITGVRTVDPLLVKSAASLGFGPLALFRKVVLPASVPSIFTGVRMAG 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---Q 257
           +     ++A+EM+          G+G  +  A     +  +   +L +  V    +    
Sbjct: 220 ASSILVLIAAEMVG------SQSGLGYLVNAAQLNFLIHDMYAGILAIAVVGVALNGVLV 273

Query: 258 LLFRPMIVW 266
            L R    W
Sbjct: 274 ALERRFSRW 282


>gi|114768906|ref|ZP_01446532.1| Glycine betaine/L-proline transport system permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549823|gb|EAU52704.1| Glycine betaine/L-proline transport system permease protein [alpha
           proteobacterium HTCC2255]
          Length = 512

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 19/238 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +    +I ++  L  GI+               + +    + A  T   + +A  +S++
Sbjct: 289 WIVIASLIVVLTWLTAGIRTAL----WSGAFLSYMGLLGFWEKAMTTLALLGTAACLSIV 344

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A+ RR    + PI+D MQ++P   F+   + +F    P        AA+  
Sbjct: 345 IGIPLGMFCARRRRFYSFIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVT 396

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +       L  +P  + E + SF  + W     + +P + P +   +  ++ 
Sbjct: 397 TMIFGGTPVVRLTVLGLRGVPDSVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIM 456

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 457 LSLAMVVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 507



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 85/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+    +    +V    +    ++  +     +Y  +L        T+  +     ++ +
Sbjct: 285 VTTPWIVIASLIVVLTWLTAGIRTALWSGAFLSYMGLLGFWEKAMTTLALLGTAACLSIV 344

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   R    S IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 345 IGIPLGMFCARRRRFYSFIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 401

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P+  +E A SF    W     + LP   P    G       +  
Sbjct: 402 GT-PVVRLTVLGLRGVPDSVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLA 460

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 461 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 507


>gi|313117423|ref|YP_004044406.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
 gi|312294314|gb|ADQ68745.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 274

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 101/264 (38%), Gaps = 20/264 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F  +RI   +     F+ +  +             P ++   +   L    L  +  ++
Sbjct: 27  GFERKRISRGVLGTGCFLALWWLAGRTQPSYL-LPTPPEVGLALWTELTSGELFVHLGQS 85

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L  +  +V+ +            S  L     PI+ I++ IP L ++ F +++F   + 
Sbjct: 86  LLHYVPGVVVGVTVGSAVGIAVGWSDALDDACTPIIRILRPIPPLAWIVFAIIWFGLGHS 145

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPF 187
           G        A F +F    W   ++ Y  + +  R+L EV+ +  + + W+    + +P 
Sbjct: 146 G--------AAFIVFIGAFWITFYNAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPD 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P L+  +  S+   W  V+A+E+          PG+G  I  +         +  MLT
Sbjct: 198 ATPELLTGLRTSVGQCWMMVIAAELF-------GAPGVGYEIITSSNNLATERSVAYMLT 250

Query: 248 MLGVIFLYDQLLFR---PMIVWSN 268
           +  V  + D  + R    ++ W  
Sbjct: 251 ISAVFLVSDWGVRRLEARLLAWRQ 274



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 12/166 (7%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +G+   +     P  ++L   P   +    +      H       + ++  G  W   
Sbjct: 105 IAVGWSDALDDACTPIIRILRPIPPLAWIVFAIIWFGLGHSG----AAFIVFIGAFWITF 160

Query: 466 FNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +N  +G  +   +  EVA +  + T WR  R ++LP   P  +TG  T+ G  W   I +
Sbjct: 161 YNAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPDATPELLTGLRTSVGQCWMMVIAA 220

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           E+           G+G  I  S+   +    V  +L +    L  +
Sbjct: 221 ELFG-------APGVGYEIITSSNNLATERSVAYMLTISAVFLVSD 259


>gi|158424793|ref|YP_001526085.1| sulfate ester transport system permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331682|dbj|BAF89167.1| sulfate ester transport system permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 292

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 99/256 (38%), Gaps = 16/256 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQ 63
           + P     R F     L A +L++  I      + +     P  + +     L    L Q
Sbjct: 37  LRPVLAGLRDFAIALALPAVILILWAIGSAYQLVPQQILPPPVYVWENFRDMLASGELLQ 96

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +AS +  R+    V+      +       S ++   + P+   +  +P LG++   +++ 
Sbjct: 97  HASISAARVAGGFVLGASLGLLLGIAMGLSEKVDDYVRPLFTAIAQVPTLGWIPLLMLFL 156

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E   I  I  + +  M  +    +  + +   EV+  F  + WQK   L
Sbjct: 157 GIG--------EALKIVIIAKAALVPMVLNTSAGIRGVSKAYLEVADVFAFTRWQKLRRL 208

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   +  S++  W  +VA E++   +      G+G  +    +   L  ++ 
Sbjct: 209 ILPAAVPPIFTGIRYSLTKAWTALVAVELLASAE------GLGYLLVWGRQMFWLDTMIV 262

Query: 244 AMLTMLGVIFLYDQLL 259
           AM+ +  V F  D+LL
Sbjct: 263 AMVIIGLVGFAMDKLL 278



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 90/266 (33%), Gaps = 22/266 (8%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--- 376
           L       P ++ +L           I        + +     +   +        V   
Sbjct: 23  LPRQAAPHPVSWRRLRPVLAGLRDFAIALALPAVILILWAIGSAYQLVPQQILPPPVYVW 82

Query: 377 ---------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      ++    I+  RV    ++ + + + +GI +G    +   ++P    +A 
Sbjct: 83  ENFRDMLASGELLQHASISAARVAGGFVLGASLGLLLGIAMGLSEKVDDYVRPLFTAIAQ 142

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + PL++  +            +++       ++ N  AG       + EVA  F 
Sbjct: 143 VPTLGWIPLLMLFLGIGEA----LKIVIIAKAALVPMVLNTSAGIRGVSKAYLEVADVFA 198

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T W+  R +ILP   P   TG   +   AW A +  E+ +         GLG  +    
Sbjct: 199 FTRWQKLRRLILPAAVPPIFTGIRYSLTKAWTALVAVELLA------SAEGLGYLLVWGR 252

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           +      +++ ++I+     A+++ L
Sbjct: 253 QMFWLDTMIVAMVIIGLVGFAMDKLL 278


>gi|126734811|ref|ZP_01750557.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter sp. CCS2]
 gi|126715366|gb|EBA12231.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter sp. CCS2]
          Length = 512

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 87/238 (36%), Gaps = 19/238 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +    +I ++  L  G +        +  + +        + A  T   + +A  +S+L
Sbjct: 289 WIVIASLIILLTWLTAGARMAIYSAAFLSYMGL----LGFWEKAMTTLALLGTAACLSIL 344

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA+  R    + PI+D MQ++P   F+   + +F    P        AA+  
Sbjct: 345 IGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVT 396

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +       L  +P  + E + SF  + W     + +P + P +   +  ++ 
Sbjct: 397 TMIFGGTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIM 456

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 457 LSLAMVVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 507



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    ++    +    +   Y     +Y  +L        T+  +     ++ +
Sbjct: 285 VSTPWIVIASLIILLTWLTAGARMAIYSAAFLSYMGLLGFWEKAMTTLALLGTAACLSIL 344

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   + IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 345 IGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 401

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A SF    W     + LP   P    G       +  
Sbjct: 402 GT-PVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIMLSLA 460

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 461 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 507


>gi|110679135|ref|YP_682142.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter denitrificans OCh 114]
 gi|109455251|gb|ABG31456.1| glycine betaine/L-proline transport system permease, putative
           [Roseobacter denitrificans OCh 114]
          Length = 513

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + ILL  +                + +    + A  T   + +A  +S+L     
Sbjct: 291 IVIAALIILLTWLTAGVRMAIWSGAFLSYMGLLGFWEKAMTTLALLGTAACLSILIGIPL 350

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+  R    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 351 GMFAARRPRFYAAIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 402

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 403 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIMLSLAM 462

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 463 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    ++    +    +   +     +Y  +L        T+  +     ++ +
Sbjct: 286 VSTPWIVIAALIILLTWLTAGVRMAIWSGAFLSYMGLLGFWEKAMTTLALLGTAACLSIL 345

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   + IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 346 IGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 402

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A SF    W     + LP   P    G       +  
Sbjct: 403 GT-PVVRLTVLGLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIMLSLA 461

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 462 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508


>gi|317154718|ref|YP_004122766.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944969|gb|ADU64020.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 275

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 94/234 (40%), Gaps = 17/234 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +++  ++ +    + +      +  +V I L    L + +  T   +LS++V   +   
Sbjct: 52  LMVIAAVVFVAWRFVGKRMAVFTLGSMVLIGL--LGLWEDSMTTLAMVLSSVVFCFVVGI 109

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A +S R    L P+LD MQ+ P   +L   V+ F            +A + A   
Sbjct: 110 PLGIAAGRSDRFESALRPVLDAMQTTPAFVYLVPIVMLFSVG--------NVAGVLATII 161

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +       +  +  +L E +++F  +  Q    + VP +MP ++  +  ++    
Sbjct: 162 FALPPIIRLTSLGIRGVHPELIEAAQAFGATRTQVLLRVQVPLAMPTILAGLNQTIMMAL 221

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + +I  G       G+GS + L +   D+   +   L ++ +  + D++
Sbjct: 222 SMVVIAALIGAG-------GLGSPVVLGLNTLDIGRAVIGGLGIVLMAIILDRI 268



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            +V    + +AW+ +G  +  FT   ++ +  LG       T+  V+  ++   ++ IP+
Sbjct: 52  LMVIAAVVFVAWRFVGKRMAVFTLGSMVLIGLLGLWEDSMTTLAMVLSSVVFCFVVGIPL 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G      S ++P    +   PA V+   +V   S  ++   L   +         I
Sbjct: 112 GIAAGRSDRFESALRPVLDAMQTTPAFVYLVPIVMLFSVGNVAGVLATIIF----ALPPI 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + +P   P  + G       A +  +++
Sbjct: 168 IRLTSLGIRGVHPELIEAAQAFGATRTQVLLRVQVPLAMPTILAGLNQTIMMALSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG+ +            V+G L +    + L+R 
Sbjct: 228 ALIGAG-------GLGSPVVLGLNTLDIGRAVIGGLGIVLMAIILDRI 268


>gi|78067694|ref|YP_370463.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77968439|gb|ABB09819.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 320

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 90/276 (32%), Gaps = 22/276 (7%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV-------CGVAIGIAWQSIGYIVN 369
            R     R+  P        +     +L + W+            +    A  +      
Sbjct: 53  RRAPSSRRYRLPGEGKTAALSTATVAVLAVLWWVATHRQWLPPLFLPSPEAVWAAFVDAW 112

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H   Q  L +      +  RV    ++A+ I +P GI +G        + P  +     P
Sbjct: 113 HGRIQGGLPLSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRVARGVLDPLLEFYRPLP 172

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + PLVV               +++       I     AG  A   +    A S   +
Sbjct: 173 PLAYLPLVVIWFGI----DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGS 228

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +  R+++LP   P  +TG   A G  W   + +E+ +       T GLG  +  ++  
Sbjct: 229 FAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSF 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                VV+G+LI+       +  +      +  R +
Sbjct: 283 LRTDIVVMGILIIGAIAWLFDLAM-----RWVERRI 313



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 122 LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVV 181

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 182 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 233

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 234 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 287

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 288 VVMGILIIGAIAWLFDLAMRWVERRIVPWKGR 319


>gi|299772083|ref|YP_003734109.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter sp. DR1]
 gi|298702171|gb|ADI92736.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter sp. DR1]
          Length = 265

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I +R+ P IF ++  V+     +  L   +    P  +V      L    L  +   +  
Sbjct: 15  IGQRLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLLVSGELWHHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  +++      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALIGLLVGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   QLL R ++ W + ++
Sbjct: 241 LGKLADVLAQLLERYLLRWHSGYQ 264



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q++   PA    PLV+                L+  G  + I  N  
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINTY 151

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S 
Sbjct: 152 HGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS- 210

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   G+G     + E      V++G+L+        +  
Sbjct: 211 -----AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248


>gi|295400979|ref|ZP_06810954.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976981|gb|EFG52584.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 258

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 82/235 (34%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L I W  F  +  ++  +    +  ++   T      +     ++  R  +  +I 
Sbjct: 16  VPILLLIAWQLFSAIGWISERVLPSPLEVLLAAITLTKNGELFTNIGVSFTRAFIGFVIG 75

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I + +G+  G  P     +    Q+    P     P+V+                L+I
Sbjct: 76  GGIGLILGLLNGIYPVAEKYLNTTIQMFRNIPHLSLIPIVILWFGVG----EEAKIFLVI 131

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + I  N   G  + P D  E+   + ++ W  +  +I P   P  + G   A G  
Sbjct: 132 IGVFFPIYINTYHGVISVPKDLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVM 191

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  +       ++G+G     + E      VVL +L+        +  
Sbjct: 192 WLTLIVAETVA------ASSGIGYMAMNAREFMQLDVVVLSILLYALLGKLADSL 240



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 93/258 (36%), Gaps = 18/258 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
                +  ++   + + +    +     P +++           L      +  R     
Sbjct: 13  PWIVPILLLIAWQLFSAIGWISERVLPSPLEVLLAAITLTKNGELFTNIGVSFTRAFIGF 72

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI      +   L          L   + + ++IP L  +   +++F           E 
Sbjct: 73  VIGGGIGLILGLLNGIYPVAEKYLNTTIQMFRNIPHLSLIPIVILWFGVG--------EE 124

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +     + +  + Y  + ++P+DL E+ + + LS W  F  +  P ++P ++  +
Sbjct: 125 AKIFLVIIGVFFPIYINTYHGVISVPKDLIEMGKVYGLSKWILFSNVIFPSALPSILVGL 184

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E +          GIG     A +   L  ++ ++L    +  L D
Sbjct: 185 RYALGVMWLTLIVAETVAASS------GIGYMAMNAREFMQLDVVVLSILLYALLGKLAD 238

Query: 257 QL---LFRPMIVWSNKFR 271
            L   L R  + W+  ++
Sbjct: 239 SLAKCLERYFLKWNPAYQ 256


>gi|254504128|ref|ZP_05116279.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222440199|gb|EEE46878.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 273

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 80/256 (31%), Gaps = 13/256 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P+             +L + W      ++     +    +                  ++
Sbjct: 26  PKPRRWTGIAVFAVLILVMEWGTQSGWISALTLPKPSDVLRTLVELYQSGQFTAHMLPSL 85

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+ V   + ++     GI IG   +  S + P    L   P     PL V        +
Sbjct: 86  TRLAVGGFLGAVAGTGTGILIGLFSYARSGLVPLVAALFPVPKIALLPLFVIWFGIDEGS 145

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ FGT    +                +  SF ++     R IILPG  P  +
Sbjct: 146 K----YALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFGLSWLSIVRKIILPGAMPGIL 201

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   +   A      +E+           G+GAY+ ++        +  GV+I+    +
Sbjct: 202 SGLRISLAIAIILLTAAEMLG------AEYGIGAYVLQAGSLYDLDRLFAGVVILSLLGV 255

Query: 568 ALNR---FLWHPLYLY 580
            LN    FL   L ++
Sbjct: 256 ILNMVIGFLERRLLVW 271



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 22/258 (8%)

Query: 17  PNIFDLLAFVLVIGII-----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           P  +  +A   V+ ++                 P D++  +           +   +  R
Sbjct: 28  PRRWTGIAVFAVLILVMEWGTQSGWISALTLPKPSDVLRTLVELYQSGQFTAHMLPSLTR 87

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     +  +       L          LVP++  +  +P +  L   V++F      K 
Sbjct: 88  LAVGGFLGAVAGTGTGILIGLFSYARSGLVPLVAALFPVPKIALLPLFVIWFGIDEGSKY 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I          + Y ++ N+ R L  + +SF LS       + +P +MPG
Sbjct: 148 A--------LIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFGLSWLSIVRKIILPGAMPG 199

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S++     + A+EM+          GIG+Y+  A    DL  +   ++ +  +
Sbjct: 200 ILSGLRISLAIAIILLTAAEMLG------AEYGIGAYVLQAGSLYDLDRLFAGVVILSLL 253

Query: 252 IFLYDQ---LLFRPMIVW 266
             + +     L R ++VW
Sbjct: 254 GVILNMVIGFLERRLLVW 271


>gi|328477431|gb|EGF47554.1| taurine transport system permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 259

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV V +++A +   P+G+   +       I P  Q L   P   ++ L++  +  
Sbjct: 66  LLTLRRVTVAVVLAVMSGTPLGLLSAYHVKTGQFIDPIIQFLRPIPPLAYYTLLILWLGI 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L L L  +      I        S+   D++  A+S      + +  I+ P   
Sbjct: 126 GESSKILLLFLAALPP----IYLAAYDAVSSINLDYRHNAASLGANSRQIFTRIVFPAAL 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++ +++M 
Sbjct: 182 PGIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKSDVMIVDIIVMG 235

Query: 564 CFVLALNRFLWH 575
              + L+  L  
Sbjct: 236 LTGVLLDWLLKR 247



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   T  R+  A+V++++       L+A   + G  + PI+  ++ IP L + T  ++
Sbjct: 62  WEHYLLTLRRVTVAVVLAVMSGTPLGLLSAYHVKTGQFIDPIIQFLRPIPPLAYYTLLIL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +       K++   LAA+  I+ +         Y ++ +I  D    + S   +  Q F 
Sbjct: 122 WLGIGESSKILLLFLAALPPIYLAA--------YDAVSSINLDYRHNAASLGANSRQIFT 173

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++PG++  +  ++   +  +V++EMI          GIG  +  A        +
Sbjct: 174 RIVFPAALPGIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKSDVM 227

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           +  ++ M     L D LL R
Sbjct: 228 IVDIIVMGLTGVLLDWLLKR 247


>gi|302543428|ref|ZP_07295770.1| putative nitrate ABC transporter, permease protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302461046|gb|EFL24139.1| putative nitrate ABC transporter, permease protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 281

 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 71/201 (35%), Gaps = 13/201 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++    +A+++ + VG  I   P  S  + P  ++L   PA    P+ +       
Sbjct: 75  SLTRILTGFALAAVLGVVVGTAIARSPLASDLLSPVLEVLRPIPAIALVPVAILLFP--- 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    +  +      + ++ +      A    ++E   +     WR    ++LPG  P 
Sbjct: 132 -SNEQGIVFITFTAAFFPVMVSTRHAVRALTPVWEEAVLTMGGGRWRVLGSVVLPGALPG 190

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G +W   I +E+ S         G+G    +      +P V +G+  +   
Sbjct: 191 ILGGLSVGIGVSWICVISAEMISG------AYGVGYRTWQDYTIVDYPGVFVGMTTIGLL 244

Query: 566 VLALN---RFLWHPLYLYGTR 583
               +         L  +  R
Sbjct: 245 GWLTSTAVELAGRRLTRWLPR 265



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 92/246 (37%), Gaps = 17/246 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+  +   L     +      +       L   +  Q  + +  R+L+   ++ +   V 
Sbjct: 34  LLTTLKVTLWLRFAQFPTVTQVAHTFAGRLGTGAYWQDLTDSLTRILTGFALAAVLGVVV 93

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            T  A+S     +L P+L++++ IP +  +   ++ F           E   +F  FT+ 
Sbjct: 94  GTAIARSPLASDLLSPVLEVLRPIPAIALVPVAILLF--------PSNEQGIVFITFTAA 145

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
            + +  S   ++  +    EE   +     W+    + +P ++PG++  + + +   W  
Sbjct: 146 FFPVMVSTRHAVRALTPVWEEAVLTMGGGRWRVLGSVVLPGALPGILGGLSVGIGVSWIC 205

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPM 263
           V+++EMI          G+G          D   +   M T+  + +L      L  R +
Sbjct: 206 VISAEMISG------AYGVGYRTWQDYTIVDYPGVFVGMTTIGLLGWLTSTAVELAGRRL 259

Query: 264 IVWSNK 269
             W  +
Sbjct: 260 TRWLPR 265


>gi|221199896|ref|ZP_03572939.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221207435|ref|ZP_03580444.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221172638|gb|EEE05076.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221180135|gb|EEE12539.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 322

 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 86/254 (33%), Gaps = 17/254 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVV-------CGVAIGIAWQSIGYIVNHFTYQDV 376
           R+  P +      +      L + W+            +    A  +      H   Q  
Sbjct: 62  RYRLPGHGNTAVLSAATIAALAVLWWVATHRQWLPPLFLPAPEAVWTAFVDAWHGRIQGG 121

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L +      +  RV    ++A+ I +PVGI +G        + P  +     P   + PL
Sbjct: 122 LPLSEHLLWSAARVFGAFLLATAIGVPVGILMGVSRIARGVLDPLLEFYRPLPPLAYLPL 181

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           VV               +++       I     AG  A   +    A S   +  +  R+
Sbjct: 182 VVIWFGI----DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRH 237

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P  +TG   A G  W   + +E+ +       T GLG  +  ++       VV
Sbjct: 238 VVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVV 291

Query: 557 LGVLIMCCFVLALN 570
           +G+LI+       +
Sbjct: 292 MGILIIGAIAWLFD 305



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 124 LSEHLLWSAARVFGAFLLATAIGVPVGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 183

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 184 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 235

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 236 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 289

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 290 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 321


>gi|163731450|ref|ZP_02138897.1| glycine betaine transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161394904|gb|EDQ19226.1| glycine betaine transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 344

 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 93/237 (39%), Gaps = 21/237 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISL 80
            F++V  ++ +  +  +       +   V I+     L  +   A +T   +     +S+
Sbjct: 110 WFIIVPLLVALTWYVAR----SIGVTVFVAISFLFLGLIDHLDVALQTLSIIFVCTGLSV 165

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                     ++S  L  ++VPILD++Q++P   +L   +  F                 
Sbjct: 166 ALGVPIGIAMSRSNTLQRIVVPILDLLQTLPTFVYLIPLIFLFSVTESKLYG-------I 218

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AI    +  +       +  +  D+ E + +F ++  QK W + +P ++P ++  +  ++
Sbjct: 219 AIILYAIVPVIRLTDLGIRLVDPDVIEAADAFGMTKHQKLWGVQLPLALPNIMAGVNQTI 278

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                 VV + ++         PG+G  +   I+  +L   + A   ++ +  + D+
Sbjct: 279 MMSLAMVVIASLVS-------APGLGVLVLRGIRNLELGVGIVAGFGIVLLAVILDR 328



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I    V     +  +     ++   F +  ++  + +   T+  + V   ++  
Sbjct: 107 TTPWFIIVPLLVALTWYVARSIGVTVFVAISFLFLGLIDHLDVALQTLSIIFVCTGLSVA 166

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +     +   + P   LL   P  V+    +  +  + +  +    + +I  
Sbjct: 167 LGVPIGIAMSRSNTLQRIVVPILDLLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILY 223

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F +T  +    + LP   P  + G       +  
Sbjct: 224 AIVPVIRLTDLGIRLVDPDVIEAADAFGMTKHQKLWGVQLPLALPNIMAGVNQTIMMSLA 283

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++    +    + L+R
Sbjct: 284 MVVIASLVS-------APGLGVLVLRGIRNLELGVGIVAGFGIVLLAVILDR 328


>gi|294506324|ref|YP_003570382.1| ABC-type proline/glycine betaine transport system, permease
           component [Salinibacter ruber M8]
 gi|294342652|emb|CBH23430.1| ABC-type proline/glycine betaine transport system, permease
           component [Salinibacter ruber M8]
          Length = 294

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++A +T   + +A +ISLL        AAK+  +  ++ P+LD MQ++P   +L   
Sbjct: 94  GLWEFAMQTLALIATATLISLLVGIPVGIWAAKNDVVDAIVRPVLDFMQTMPAFVYLIPA 153

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV F            +  + A F              +  +  +  E + SF  +  Q 
Sbjct: 154 VVLFGLG--------AVPGVIATFIFATPPCVRLTNLGIRQVSEEAVEAAESFGSTPSQM 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  ++      VV + +I  G       G+G  +   I++  + 
Sbjct: 206 LFKVELPMALPTILAGVNQTVLLALSMVVIAALIGAG-------GLGDPVVEGIQQLRIG 258

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +    D++
Sbjct: 259 VGFEGGLAIVILAIFLDRI 277



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 78/244 (31%), Gaps = 16/244 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMF 388
           L S   +     + W+    GVA+             F    +     +G       T+ 
Sbjct: 45  LPSWAMIVLFTVLAWWVASRGVALFTVVGLTLLEDIEFALFGMEIAFGMGLWEFAMQTLA 104

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +    +I+ ++ IPVGIW      + + ++P    +   PA V+    V       +  
Sbjct: 105 LIATATLISLLVGIPVGIWAAKNDVVDAIVRPVLDFMQTMPAFVYLIPAVVLFGLGAVPG 164

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   +          +     G      +  E A SF  T  +    + LP   P  + 
Sbjct: 165 VIATFIF----ATPPCVRLTNLGIRQVSEEAVEAAESFGSTPSQMLFKVELPMALPTILA 220

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       A +  +++ +   G       GLG  + E  ++        G L +    + 
Sbjct: 221 GVNQTVLLALSMVVIAALIGAG-------GLGDPVVEGIQQLRIGVGFEGGLAIVILAIF 273

Query: 569 LNRF 572
           L+R 
Sbjct: 274 LDRI 277


>gi|83815399|ref|YP_444577.1| glycine betaine/L-proline transport system permease protein proW
           [Salinibacter ruber DSM 13855]
 gi|83756793|gb|ABC44906.1| glycine betaine/L-proline transport system permease protein proW
           [Salinibacter ruber DSM 13855]
          Length = 292

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L ++A +T   + +A +ISLL        AAK+  +  ++ P+LD MQ++P   +L   
Sbjct: 92  GLWEFAMQTLALIATATLISLLVGIPVGIWAAKNDVVDAIVRPVLDFMQTMPAFVYLIPA 151

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV F            +  + A F              +  +  +  E + SF  +  Q 
Sbjct: 152 VVLFGLG--------AVPGVIATFIFATPPCVRLTNLGIRQVSEEAVEAAESFGSTPSQM 203

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  ++      VV + +I  G       G+G  +   I++  + 
Sbjct: 204 LFKVELPMALPTILAGVNQTVLLALSMVVIAALIGAG-------GLGDPVVEGIQQLRIG 256

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +    D++
Sbjct: 257 VGFEGGLAIVILAIFLDRI 275



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 78/244 (31%), Gaps = 16/244 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMF 388
           L S   +     + W+    GVA+             F    +     +G       T+ 
Sbjct: 43  LPSWAMIVLFTVLAWWVASRGVALFTVVGLTLLEDVEFALFGMEIAFGMGLWEFAMQTLA 102

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +    +I+ ++ IPVGIW      + + ++P    +   PA V+    V       +  
Sbjct: 103 LIATATLISLLVGIPVGIWAAKNDVVDAIVRPVLDFMQTMPAFVYLIPAVVLFGLGAVPG 162

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   +          +     G      +  E A SF  T  +    + LP   P  + 
Sbjct: 163 VIATFIF----ATPPCVRLTNLGIRQVSEEAVEAAESFGSTPSQMLFKVELPMALPTILA 218

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       A +  +++ +   G       GLG  + E  ++        G L +    + 
Sbjct: 219 GVNQTVLLALSMVVIAALIGAG-------GLGDPVVEGIQQLRIGVGFEGGLAIVILAIF 271

Query: 569 LNRF 572
           L+R 
Sbjct: 272 LDRI 275


>gi|289706640|ref|ZP_06502989.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289556656|gb|EFD49998.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 289

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 99/249 (39%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL   +    L    +   P  ++      L+   L  +   +T R+L   ++    
Sbjct: 55  VLLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHVGISTQRVLLGFLLGAAL 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                +    SR    +  P++  ++++P L ++   +++       KV    + A F +
Sbjct: 115 GLAVGSALGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPV 174

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           FT+        +Y +L ++   L E  R+F   G      + +P  +P +   + ++++ 
Sbjct: 175 FTT--------VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQ 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
            W F+VA+E+I          G+G  +  +        ++ A++ +  +  L D LL   
Sbjct: 227 AWLFLVAAELIASS------MGLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLLGLL 280

Query: 261 --RPMIVWS 267
             R +  W+
Sbjct: 281 ERRALRRWA 289



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 91/258 (35%), Gaps = 11/258 (4%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQD 375
            R     R         +      + +L ++W     G+   +   S G +++      +
Sbjct: 30  ARRRQRPRVLDRPGARAVVGLAAPAVLLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLE 89

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +     I+  RV++  ++ + + + VG  +G      +   P    L A P+  + P
Sbjct: 90  RGDLWLHVGISTQRVLLGFLLGAALGLAVGSALGLSRWADALFAPLIGALRAVPSLAWVP 149

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +     +       L+  G  + +   V A          E   +F   G    R
Sbjct: 150 LLILWMQIGEESK----VTLIAIGAFFPVFTTVYAALRHVDPHLVEAGRAFGYHGLSLLR 205

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP + P   +G   A   AW   + +E+ +       + GLG  + +S   G    +
Sbjct: 206 TVQLPAVVPAVFSGLRLALAQAWLFLVAAELIA------SSMGLGFLLTDSQNNGRTDRL 259

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L ++++       +  L
Sbjct: 260 ILAIILLAVLGKLTDWLL 277


>gi|149182051|ref|ZP_01860536.1| ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850230|gb|EDL64395.1| ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 251

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 14/247 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF  +   L  G   + L        P D+   + I     +L      +  R+   + I
Sbjct: 9   IFFAVVLFLWEGGARLGLWPKIILPAPTDVYQSLKIGFSDMTLVYDLIASFRRLFIGLGI 68

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LL       L AKS+     L  +L   QS+P + +L   +++F           E A 
Sbjct: 69  ALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPLAIMWFGMN--------ETAV 120

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +     + M  ++   + N+P      +++    G   F  + +P S+P  V    +
Sbjct: 121 IFVVVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASVPYAVTGARL 180

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + +  W  ++A E++  G      PG+G  +  A    D+  ++  M+ +  +  + DQL
Sbjct: 181 AWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIGVMIIIGVIGAIVDQL 234

Query: 259 LFRPMIV 265
           +F  +  
Sbjct: 235 IFSRIER 241



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 20/252 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------ITMFRVVVLII 395
           + +F VV  +  G A   +   +      DV   + +G            +  R+ + + 
Sbjct: 8   LIFFAVVLFLWEGGARLGLWPKIILPAPTDVYQSLKIGFSDMTLVYDLIASFRRLFIGLG 67

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA +I   +G+ +         +        + P+ V+ PL +             +  +
Sbjct: 68  IALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPLAIMWFGM----NETAVIFV 123

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ G  + +  N+  G    P  F   A +    G   +  + LP   PY VTGA  A  
Sbjct: 124 VVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASVPYAVTGARLAWA 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            AW A +  E+ S G       GLG  +  +++ G    V+  ++I+      +++ ++ 
Sbjct: 184 FAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIGVMIIIGVIGAIVDQLIFS 237

Query: 576 PLYLYGTRCLRL 587
            +     +   L
Sbjct: 238 RIERSVLKRWGL 249


>gi|302524813|ref|ZP_07277155.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
 gi|302433708|gb|EFL05524.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
          Length = 294

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 102/254 (40%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R   P +  L+  V++  ++       + T   P D+      T+   S+  +   +  R
Sbjct: 39  RGFLPPVGALVLLVVIWQLLWAAAFWPETTLPAPLDVWAEFWGTVTNGSVFGFIWTSVHR 98

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                   ++       L AK R +   + P+L  +QS+P + ++   V++F        
Sbjct: 99  AALGFAAGVVLGTPLGILVAKVRVVRAAIGPLLSGLQSLPSVAWVPAAVIWFGIN----- 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              + A  F +    V ++   +   +  IP  L  V +      +    ++ +P ++PG
Sbjct: 154 ---DAAIYFVVLLGSVPSIANGLVSGIDQIPPILPRVGKVMGAGRFAAARHILLPAALPG 210

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +    +  W  ++A+E+I    ++    G+G+Y+        +  ++ A+  +L V
Sbjct: 211 FLAGLKQGWAFSWRSLMAAELIARSPSLGV--GLGTYLNDGSSYNSMPMVIAAIFLILFV 268

Query: 252 IFLYDQLLFRPMIV 265
               + ++FRP+  
Sbjct: 269 GVAIELIVFRPLER 282



 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 96/277 (34%), Gaps = 15/277 (5%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG------IAWQ 362
           +   + +L    G         F++       + +L +  + ++   A            
Sbjct: 15  VGAGLDRLDTPTGARPTSLRRRFVRGFLPPVGALVLLVVIWQLLWAAAFWPETTLPAPLD 74

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                    T   V   IW    ++ R  +      ++  P+GI +     + + I P  
Sbjct: 75  VWAEFWGTVTNGSVFGFIW---TSVHRAALGFAAGVVLGTPLGILVAKVRVVRAAIGPLL 131

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P+  + P  V          +  +  +++ G+   I   +++G    P     V
Sbjct: 132 SGLQSLPSVAWVPAAVIWFGI----NDAAIYFVVLLGSVPSIANGLVSGIDQIPPILPRV 187

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
                   +   R+I+LP   P ++ G       +W + + +E+ +         GLG Y
Sbjct: 188 GKVMGAGRFAAARHILLPAALPGFLAGLKQGWAFSWRSLMAAELIARSPSLGV--GLGTY 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           + + +   S P V+  + ++    +A+   ++ PL  
Sbjct: 246 LNDGSSYNSMPMVIAAIFLILFVGVAIELIVFRPLER 282


>gi|170724070|ref|YP_001751758.1| choline ABC transporter permease [Pseudomonas putida W619]
 gi|169762073|gb|ACA75389.1| choline ABC transporter, permease protein [Pseudomonas putida W619]
          Length = 281

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 18/246 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+    + +   +  L+      TV   +  ++ + L      Q    T  ++  A V+
Sbjct: 48  WFNPFVLIALFAALAHLIQRKWALTVFVALSFLLILNL---GYWQETMETLAQVTFATVV 104

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        +AA        + P+LD+MQ++P   +L  T+  F     G V G     
Sbjct: 105 CVAIGVPLGIVAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTV 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FAI            Y  +C++P++L +  ++F  S  Q    + +P +MP +   +  
Sbjct: 162 VFAIAAP-----IRLTYLGICDVPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQ 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + ++          G+G  +  A+   D+     A L ++ +  + D++
Sbjct: 217 CIMLSLSMVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRI 269

Query: 259 LFRPMI 264
             +P +
Sbjct: 270 CKQPEV 275



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +          I   W    ++   F     L        T+ +V    ++   I +P
Sbjct: 52  FVLIALFAALAHLIQRKWALTVFVALSFLLILNLGYWQETMETLAQVTFATVVCVAIGVP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + ++P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 112 LGIVAAHKPMFYTAMRPVLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 169 IRL-TYLGICDVPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 228 AALVG-------ADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|157960085|ref|YP_001500119.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella pealeana ATCC 700345]
 gi|157845085|gb|ABV85584.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella pealeana ATCC 700345]
          Length = 299

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 99/234 (42%), Gaps = 16/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            + ++I I  ++    +   +   +V    + +    + +   RT   +    ++++L  
Sbjct: 63  WWAVLISITALVYLASRSWKLSLAVVVSFLL-IGYFGMWEDTMRTLSIITVCTLLAILLG 121

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L ++S R+  ++ PILD+MQ++P   +L   V+       GKV G     I+AI 
Sbjct: 122 IPIGILMSRSDRIQSIVTPILDVMQTMPAFVYLIPVVMLLG---IGKVPGVIAVVIYAIP 178

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +       +  + +++ E + ++  +  Q+   + +P + P ++  +  ++   
Sbjct: 179 -----PVIRLTNLGIRLVDKEVLEAATAYGANPMQRLMGVQLPLASPTIMAGINQTIMMA 233

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV + MI V        G+G  +  +I  Q     L+  L ++ +  ++D+
Sbjct: 234 LGMVVIASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 75/231 (32%), Gaps = 11/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S    +             +W+    +V  F       +      T+  + V  ++A ++
Sbjct: 61  SPWWAVLISITALVYLASRSWKLSLAVVVSFLLIGYFGMWEDTMRTLSIITVCTLLAILL 120

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI +     I S + P   ++   PA V+   VV  +        +   + ++   
Sbjct: 121 GIPIGILMSRSDRIQSIVTPILDVMQTMPAFVYLIPVVMLLGIG----KVPGVIAVVIYA 176

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      +  E A+++     +    + LP   P  + G       A   
Sbjct: 177 IPPVIRLTNLGIRLVDKEVLEAATAYGANPMQRLMGVQLPLASPTIMAGINQTIMMALGM 236

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ +           GLG  + +S     F   +   L +    +  +R
Sbjct: 237 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280


>gi|262368226|ref|ZP_06061555.1| taurine transport system permease tauC [Acinetobacter johnsonii
           SH046]
 gi|262315904|gb|EEY96942.1| taurine transport system permease tauC [Acinetobacter johnsonii
           SH046]
          Length = 314

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     IAS++ IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKIVFSAFFIASLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +++ GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRGLIEAGYTLGTNKAKSLFHVVIPAALPD 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IVSE+         TTG+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVSELIG------TTTGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 292 GLVCDVIL 299



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 76/214 (35%), Gaps = 14/214 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
                P   D     Q    +   + SA  I+ L       L   S ++  +  P ++  
Sbjct: 102 AFTTPPAQADAPWFHQSLWHSIKIVFSAFFIASLVGIPLGILCGFSNKISQLTEPFVEFF 161

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P   F    V         K        I  I    ++     +  +   + R L E
Sbjct: 162 RYLPAPAFGALAVAILGINDAPK--------IAIIVIGTLFQQILIIANTTRMVDRGLIE 213

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
              +   +  +  +++ +P ++P +  ++ + +   W +++ SE+I          GI  
Sbjct: 214 AGYTLGTNKAKSLFHVVIPAALPDIYRDLRVLLGWAWTYLIVSELIG------TTTGITW 267

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +I    + Q+   +  A+L +  +  + D +L +
Sbjct: 268 FITQQARYQNFDNVYAAILIIGVIGLVCDVILMK 301


>gi|294101047|ref|YP_003552905.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
 gi|293616027|gb|ADE56181.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
          Length = 283

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 96/230 (41%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           I  +  L            I+ +  I +    L + A  T   +++++ +SLL       
Sbjct: 56  IIFVAFLAWKATRCLSTTIILPLSLILIGSFGLWKLAMGTLAIVIASVFLSLLIGIPVGI 115

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A+++ +  ++ PILD MQ++P   +L   +++F           ++ A+ A     + 
Sbjct: 116 LMAEAKGVEPIVKPILDAMQTMPSFVYLIPAMMFFGLG--------KVPAVLATLIYSLP 167

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +       L  +P+  +E + ++  + WQ    + VP +MP ++  +  +       VV
Sbjct: 168 PVIRLTNLGLKQVPQPAQEAAIAYGATKWQLLKEVRVPLAMPTIMAGVNQTTMMALSMVV 227

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + MI          G+G  + L+I   D+     A ++++ +    D++
Sbjct: 228 VASMI-------GARGLGQEVLLSINRIDVGRGFEAGISIVIMAIAIDRI 270



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 83/264 (31%), Gaps = 11/264 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           ++  ++ +  T   I        L+  +   +        F             +   + 
Sbjct: 18  VNWLLQAMAPTFDSISNGILAMLLKTENLLHIIPWWFYIIFVAFLAWKATRCLSTTIILP 77

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +  L   T+  V+  + ++ +I IPVGI +     +   ++P    +   
Sbjct: 78  LSLILIGSFGLWKLAMGTLAIVIASVFLSLLIGIPVGILMAEAKGVEPIVKPILDAMQTM 137

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+ V+    +           +   L  +  +   ++     G    P   +E A ++  
Sbjct: 138 PSFVYLIPAMMFFGLG----KVPAVLATLIYSLPPVIRLTNLGLKQVPQPAQEAAIAYGA 193

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  + + +P   P  + G       A +  +V+ +           GLG  +  S  
Sbjct: 194 TKWQLLKEVRVPLAMPTIMAGVNQTTMMALSMVVVASMIG-------ARGLGQEVLLSIN 246

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
           +          + +    +A++R 
Sbjct: 247 RIDVGRGFEAGISIVIMAIAIDRI 270


>gi|294648756|ref|ZP_06726214.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292825326|gb|EFF84071.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 267

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I++ + P +F +L   +     +  +   +    P  +V      L    L Q+   +  
Sbjct: 17  ITKGLLPWLFPILLLTIWQIASSSGILQNRVLPAPSAVVSAFWQLLVSGELWQHVQVSAG 76

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 77  RALLGLLIGGGLGLILGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGID---- 132

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + M  + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP
Sbjct: 133 ----ETAKLFLVAVGVFFPMYINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S+   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 189 SILVGLRFSLGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDIVLVGILLYAL 242

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R ++ W   ++
Sbjct: 243 LGKLADVLAQALERYLLRWHAGYQ 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + +  N 
Sbjct: 97  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPMYINT 152

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ +  W+ ++ IILPG  P  + G   + G  W   IV+E  S
Sbjct: 153 YHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS 212

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 213 ------AQAGIGYMTMNAREFLQTDIVLVGILLYALLGKLADVL 250


>gi|118469502|ref|YP_884960.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118170789|gb|ABK71685.1| ABC transporter, permease protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 242

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +++  ++         +   P D+++ +   L    L  +   +  R+ +  +    
Sbjct: 7   VALLVIWHLVAKRGAFSPSQLPPPGDVLEALGELLRRGDLWTHLQTSVSRVFAGYLAGAA 66

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V  +L   S  +  +  P +  ++++P L ++   +++F      KV    + A F 
Sbjct: 67  VALVLGSLIGLSATVRRLFAPTVAALRTVPSLAWVPLLLLWFGIGETPKVTLVAIGAFFP 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+T+           +L ++   L EV R++   G      + +P + P LV  + + ++
Sbjct: 127 IYTT--------TASALSHVDAQLLEVGRAYGRRGAALVTTVMLPAAAPALVNGLRLGLA 178

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W F+VA+E+I          G+G  +  +        +L A+  + G+  L D L 
Sbjct: 179 NAWLFLVAAELIASSK------GLGFMLIDSQNTGRTDIMLLAIGLLAGLGKLTDSLF 230



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    +  + + + +G  IG    +     P    L   P+  + PL++       
Sbjct: 53  SVSRVFAGYLAGAAVALVLGSLIGLSATVRRLFAPTVAALRTVPSLAWVPLLLLWFGIGE 112

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+  G  + I     +  S       EV  ++   G      ++LP   P 
Sbjct: 113 T----PKVTLVAIGAFFPIYTTTASALSHVDAQLLEVGRAYGRRGAALVTTVMLPAAAPA 168

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            V G       AW   + +E+ +       + GLG  + +S   G    +
Sbjct: 169 LVNGLRLGLANAWLFLVAAELIA------SSKGLGFMLIDSQNTGRTDIM 212


>gi|326386854|ref|ZP_08208469.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208657|gb|EGD59459.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 260

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + KL RTLG  R+  P  FL +      + ++          VA  +A  ++   +   
Sbjct: 3   ILSKLSRTLGSSRWLSPIAFLAVWELASRTGLIPQRTLAAPSAVAGTLAEMTLSGELPSN 62

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                        ++  RV+  + I     I + +  G      + + P  Q+    P  
Sbjct: 63  L-----------VVSFERVLFGLAIGVTTGIVLALLAGLSRRGEAAVDPIMQIKRTIPTL 111

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL +                L+ F + + +  N+ +G         E A SF ++  
Sbjct: 112 ALTPLFIVWFGIGETPK----VALIAFASMFPVYLNLFSGIRGVDARLVEGARSFGLSQA 167

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               ++ILPG  P  + G   +   A    +V+E  +       + GLG  I  + +   
Sbjct: 168 ELVWHVILPGALPSLLVGLRYSLSIAILVLVVAEQIN------ASAGLGYLINNARDFLR 221

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              +V+ +L+     LA +  +
Sbjct: 222 TDIIVVCLLVYAVLGLAADGLV 243



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AF+ V  + +   L   +    P  +   +        LP     +  R+L  + I + 
Sbjct: 20  IAFLAVWELASRTGLIPQRTLAAPSAVAGTLAEMTLSGELPSNLVVSFERVLFGLAIGVT 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A LA  SRR    + PI+ I ++IP L      +V+F      KV     A++F 
Sbjct: 80  TGIVLALLAGLSRRGEAAVDPIMQIKRTIPTLALTPLFIVWFGIGETPKVALIAFASMFP 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         +++  +  +   L E +RSF LS  +  W++ +P ++P L+  +  S+S
Sbjct: 140 VY--------LNLFSGIRGVDARLVEGARSFGLSQAELVWHVILPGALPSLLVGLRYSLS 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +V +E I          G+G  I  A        I+  +L    +    D L+
Sbjct: 192 IAILVLVVAEQINASA------GLGYLINNARDFLRTDIIVVCLLVYAVLGLAADGLV 243


>gi|255263921|ref|ZP_05343263.1| glycine betaine transporter, permease protein [Thalassiobium sp.
           R2A62]
 gi|255106256|gb|EET48930.1| glycine betaine transporter, permease protein [Thalassiobium sp.
           R2A62]
          Length = 343

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 81/194 (41%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +     IS++         +KS RL   +VPILD++Q++P   +L   +  F 
Sbjct: 149 AMQTLSIIFVCTGISIVLGVPIGIAMSKSDRLQRSVVPILDLLQTLPTFVYLIPLIFLFS 208

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                           AI    +  +       +  + +D+ E + +F ++  QK   + 
Sbjct: 209 VTESKLYG-------IAIILYAIVPVIRLTDLGIRLVDQDVIEAANAFGMNSNQKLLKVE 261

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   + A
Sbjct: 262 LPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVNVLRGIRNLELGVGIVA 314

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 315 GIGIVLLAVILDRV 328



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 89/285 (31%), Gaps = 17/285 (5%)

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L +  +  + I          L + +  + + L  +       F        V  ++ I
Sbjct: 60  NLSQTRDLTKGIEDGFLAAKPALKSVLDPITQPLSWLLDGALWTFSATPWFIMVPILVAI 119

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            WF          +     ++         +    +   T+  + V   I+ ++ +P+GI
Sbjct: 120 AWFA-------SRSKPVTIFVAFSILLLAFVDHYDVAMQTLSIIFVCTGISIVLGVPIGI 172

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +     +   + P   LL   P  V+    +  +  + +  +    + +I      ++ 
Sbjct: 173 AMSKSDRLQRSVVPILDLLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILYAIVPVIR 229

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G      D  E A++F +   +    + LP   P  + G       +    +++ +
Sbjct: 230 LTDLGIRLVDQDVIEAANAFGMNSNQKLLKVELPLALPNIMAGVNQTIMMSLAMVVIASL 289

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            S         GLG  +            ++  + +    + L+R
Sbjct: 290 VS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDR 327


>gi|254720512|ref|ZP_05182323.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. 83/13]
 gi|306838120|ref|ZP_07470977.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
 gi|306406857|gb|EFM63079.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
          Length = 272

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +           +    +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDHSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DHSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|261323281|ref|ZP_05962478.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261299261|gb|EEY02758.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
          Length = 284

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 95  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 153 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMWQSFGLSWWSIVRKIVLPGAFPA 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 211 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 264

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 265 GLIVNVVI-----GWVERRF 279



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 69  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 129 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 181 DRSLIRMWQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 234

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 235 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 282


>gi|199599214|ref|ZP_03212616.1| taurine transport system permease protein tauC [Lactobacillus
           rhamnosus HN001]
 gi|258507169|ref|YP_003169920.1| taurine transport system permease [Lactobacillus rhamnosus GG]
 gi|199589895|gb|EDY97999.1| taurine transport system permease protein tauC [Lactobacillus
           rhamnosus HN001]
 gi|257147096|emb|CAR86069.1| Taurine transport system permease protein [Lactobacillus rhamnosus
           GG]
 gi|259648539|dbj|BAI40701.1| taurine ABC transporter permease component [Lactobacillus rhamnosus
           GG]
          Length = 259

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV V +++A +   P+G+   +       I P  Q L   P   ++ L++  +  
Sbjct: 66  LLTLRRVTVAVVLAVMSGTPLGLLSAYHVKTGQFIDPIIQFLRPIPPLAYYTLLILWLGI 125

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L L L  +      I        S+   D++  A+S      + +  I+ P   
Sbjct: 126 GESSKILLLFLAALPP----IYLAAYDAVSSINLDYRHNAASLGANSRQIFTRIVFPAAL 181

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG  +A G A+   + +E+ +       T+G+G  + +++       +++ +++M 
Sbjct: 182 PGIMTGIRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKSDVMIVDIIVMG 235

Query: 564 CFVLALNRFLWH 575
              + L+  L  
Sbjct: 236 LTGVLLDWLLKR 247



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 99/252 (39%), Gaps = 25/252 (9%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----------PQYASRTT 69
           F  L    VI  +  L   +     P  +     + L   +L           ++   T 
Sbjct: 11  FGWLLIPAVILSLWWLATRLH-LVSPVLLPSPGRVWLAAVNLLQFGYNGTPFWEHYLLTL 69

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+  A+V++++       L+A   + G  + PI+  ++ IP L + T  +++       
Sbjct: 70  RRVTVAVVLAVMSGTPLGLLSAYHVKTGQFIDPIIQFLRPIPPLAYYTLLILWLGIGESS 129

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K++   LAA+  I+ +         Y ++ +I  D    + S   +  Q F  +  P ++
Sbjct: 130 KILLLFLAALPPIYLAA--------YDAVSSINLDYRHNAASLGANSRQIFTRIVFPAAL 181

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++  +  ++   +  +V++EMI          GIG  +  A        ++  ++ M 
Sbjct: 182 PGIMTGIRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKSDVMIVDIIVMG 235

Query: 250 GVIFLYDQLLFR 261
               L D LL R
Sbjct: 236 LTGVLLDWLLKR 247


>gi|218437070|ref|YP_002375399.1| binding-protein-dependent transporters inner membrane component
           [Cyanothece sp. PCC 7424]
 gi|218169798|gb|ACK68531.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7424]
          Length = 275

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++FRV+    + +I+ IP+GI +G    I +  +P   ++   PA  F PL++  +   
Sbjct: 84  ISVFRVLSGFFLGAILSIPLGISMGAFASIRALFEPIIGVIRYMPAPAFTPLLLIYLGI- 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  GT ++    ++      P +  EV+ +     W+  R +I P I P
Sbjct: 143 ---DEPSKIALIFLGTVFFNTLMIMDSVKFIPKELIEVSYTLGGNRWQVLRQVISPFIVP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +         AWN  +V+E+ +        TGLG  I  + +     E+   ++++  
Sbjct: 200 KIIDTFRINMAAAWNLVVVAELVA------AETGLGKRILLAQKFLKTDEIFACLIVLGM 253

Query: 565 FVLALN 570
              A++
Sbjct: 254 IGFAID 259



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 16/253 (6%)

Query: 22  LLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L  +L+  +I +           P ++   +        L +    +  R+LS   +  
Sbjct: 38  ILVPLLIWQLICSFTDIKAVFLPSPLEVCKALIRLGQQGLLFKDTWISVFRVLSGFFLGA 97

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           + +            +  +  PI+ +++ +P   F    ++Y     P K        I 
Sbjct: 98  ILSIPLGISMGAFASIRALFEPIIGVIRYMPAPAFTPLLLIYLGIDEPSK--------IA 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+  T  +  S+  IP++L EVS +   + WQ    +  PF +P ++    ++M
Sbjct: 150 LIFLGTVFFNTLMIMDSVKFIPKELIEVSYTLGGNRWQVLRQVISPFIVPKIIDTFRINM 209

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  W  VV +E++          G+G  I LA K      I   ++ +  + F  D L F
Sbjct: 210 AAAWNLVVVAELVAAET------GLGKRILLAQKFLKTDEIFACLIVLGMIGFAID-LSF 262

Query: 261 RPMIVWSNKFRLE 273
           R +   + ++ ++
Sbjct: 263 RLLARLTCQWSMD 275


>gi|255320678|ref|ZP_05361855.1| taurine transport system permease protein TauC [Acinetobacter
           radioresistens SK82]
 gi|262380690|ref|ZP_06073843.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
 gi|255302294|gb|EET81534.1| taurine transport system permease protein TauC [Acinetobacter
           radioresistens SK82]
 gi|262297638|gb|EEY85554.1| nitrate ABC transporter, permease [Acinetobacter radioresistens
           SH164]
          Length = 268

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      L    L Q+   +T R L+ + +      +   L   S+    +L 
Sbjct: 49  LPAPTAVLTAFWSLLISGELWQHVKVSTARALTGLAVGGGLGLLLGLLNGSSKVASNLLD 108

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 109 TTLQMLRNIPALALIPLVILWFGID--------ESAKLFLVAIGVFFPIYINTYHGIRSV 160

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ +S+ L+  Q +  + +P +MP ++  +  ++   W  ++ +E I        
Sbjct: 161 DPQLIEMGKSYGLNRRQLYQQIILPGAMPSILVGLRFALGLVWVLLIVAETIS------A 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      +L  +L    +  L D L   L R ++ W   ++
Sbjct: 215 QSGIGYMTMNAREFLQTDIVLVGILLYALLGKLADILAQGLERYLLRWHPGYQ 267



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 10/163 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q+L   PA    PLV+                L+  G  + I  N  
Sbjct: 99  SSKVASNLLDTTLQMLRNIPALALIPLVILWFGI----DESAKLFLVAIGVFFPIYINTY 154

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ +   + ++ IILPG  P  + G   A G  W   IV+E  S 
Sbjct: 155 HGIRSVDPQLIEMGKSYGLNRRQLYQQIILPGAMPSILVGLRFALGLVWVLLIVAETIS- 213

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                  +G+G     + E      V++G+L+        +  
Sbjct: 214 -----AQSGIGYMTMNAREFLQTDIVLVGILLYALLGKLADIL 251


>gi|121603457|ref|YP_980786.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120592426|gb|ABM35865.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 309

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 80/250 (32%), Gaps = 21/250 (8%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-- 374
            R          +    L   +   +   I     +  + +G A   +G+I  H      
Sbjct: 33  RRAYPARPVAEADQADALREIRPARHWPGIGLVIPLLALVLGEAAPRLGWISPHLLPPPS 92

Query: 375 ---------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                      L +      +  RV     + + + + +G  +G        + P  Q L
Sbjct: 93  TVLQTLRDWGPLTLATHIGASAARVAAGFALGAALAVAIGALVGLSRLGERLLAPSFQAL 152

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P+  + PL++  +            +L+  G  + +   V +G         EVA  
Sbjct: 153 RAIPSLAWVPLLLLWLGI----DEAPKIVLIAIGAFFPVYMGVASGFRDVDRKLVEVARM 208

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++     R ++LP   P  +TG       AW   + +E+ +       + GLG  + +
Sbjct: 209 ARLSPLALVRRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIA------ASRGLGYLLTD 262

Query: 546 STEKGSFPEV 555
             E      V
Sbjct: 263 GRETSRADIV 272



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)

Query: 14  RIFPNI-FDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R +P I   +    LV+G     L         P   V          +L  +   +  R
Sbjct: 57  RHWPGIGLVIPLLALVLGEAAPRLGWISPHLLPPPSTVLQTLRDWGPLTLATHIGASAAR 116

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   +          L   SR    +L P    +++IP L ++   +++         
Sbjct: 117 VAAGFALGAALAVAIGALVGLSRLGERLLAPSFQALRAIPSLAWVPLLLLWLGID----- 171

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E   I  I     + +   +     ++ R L EV+R  RLS       + +P ++P 
Sbjct: 172 ---EAPKIVLIAIGAFFPVYMGVASGFRDVDRKLVEVARMARLSPLALVRRVLLPAALPA 228

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +   +S  W F+VA+E+I          G+G  +    +      +L A+L +  +
Sbjct: 229 VLTGLRNGLSLAWMFMVAAELIAAS------RGLGYLLTDGRETSRADIVLAAILLLALL 282

Query: 252 IFLYD---QLLFRPMIVWSNKF 270
             L D   Q L   ++ W + F
Sbjct: 283 GKLTDSAMQWLEHRLLSWRDTF 304


>gi|256015249|ref|YP_003105258.1| taurine ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|255997909|gb|ACU49596.1| taurine ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
          Length = 272

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL +       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFLIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   +++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFLIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|288574363|ref|ZP_06392720.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570104|gb|EFC91661.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 283

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 103/237 (43%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             A+++ + +   L  G +++ V   I+      + +  L   A  T   ++++++ISLL
Sbjct: 52  WWAYIIAVALGVWLATGKKKSAV---ILAAFTFCIGLFGLWGLALETLSIIITSVLISLL 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  + A+  R    + P+LD MQ++P   +L   +++F           ++ A+FA
Sbjct: 109 LGIPLGVMTAEFPRGTAFMKPLLDGMQTMPSFVYLIPAMMFFGLG--------KVPAVFA 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +       L  +P+  +E + ++  + WQ    + +P +MPG++  +  +  
Sbjct: 161 TLIYSMPPVIRLTTLGLRQVPKPAQEAAIAYGATRWQLLKEVRLPLAMPGIMAGINQTTM 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV   MI          G+G  + L+I   D+     + ++++ +  + D++
Sbjct: 221 MALAMVVVCAMI-------GARGLGQEVLLSINRIDIGRGFESGISIVIMAIVIDRI 270



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 93/268 (34%), Gaps = 15/268 (5%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC---GVAIGIAWQSIG 365
           +++ V  L                 + S  + S  +  +W  ++    GV +    +   
Sbjct: 14  VNDGVDWLLVRFAPAFDSISVFISSVLSGIQSSLEMVPWWAYIIAVALGVWLATGKKKSA 73

Query: 366 YIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            I+  FT+   L+ +W L   T+  ++  ++I+ ++ IP+G+     P  ++ ++P    
Sbjct: 74  VILAAFTFCIGLFGLWGLALETLSIIITSVLISLLLGIPLGVMTAEFPRGTAFMKPLLDG 133

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P+ V+    +           +      +  +   ++     G    P   +E A 
Sbjct: 134 MQTMPSFVYLIPAMMFFGLG----KVPAVFATLIYSMPPVIRLTTLGLRQVPKPAQEAAI 189

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++  T W+  + + LP   P  + G       A    +V  +           GLG  + 
Sbjct: 190 AYGATRWQLLKEVRLPLAMPGIMAGINQTTMMALAMVVVCAMIG-------ARGLGQEVL 242

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            S  +          + +    + ++R 
Sbjct: 243 LSINRIDIGRGFESGISIVIMAIVIDRI 270


>gi|158424785|ref|YP_001526077.1| putative alkanesulfonate transport system permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158331674|dbj|BAF89159.1| putative alkanesulfonate transport system permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 283

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 83/264 (31%), Gaps = 22/264 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLY 378
                  P    Q  S  +      + W   +  + +  A  S G++ +       DV  
Sbjct: 8   SATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLPAPTDVAL 67

Query: 379 VIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
             W             ++  R +  + I   I   +G+  G      + +    Q+L   
Sbjct: 68  AFWRTLKDGSLLANIAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDSTLQMLRNV 127

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PLV+                L+  G  + I  N   G         E+A  + +
Sbjct: 128 PHLAIIPLVILWFGI----DEEAKVFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARVYGL 183

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +    +  I+LPG  P  + G   A G  W   IV+E  S       T+G+G     + E
Sbjct: 184 SPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETIS------STSGIGYMTMNARE 237

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
                 VVLGVL         +  
Sbjct: 238 FLQTDVVVLGVLAYALLGKLADSL 261



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 97/266 (36%), Gaps = 17/266 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P    L   VL     +      +    P D+      TL   SL    + +T R L+
Sbjct: 32  LLPWALPLAVLVLWQAAASFGFLSSRVLPAPTDVALAFWRTLKDGSLLANIAVSTKRALT 91

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + I     F    L    R     L   L +++++P L  +   +++F           
Sbjct: 92  GLFIGGGIGFALGVLNGIWRPAETALDSTLQMLRNVPHLAIIPLVILWFGID-------- 143

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  + +  +  + R L E++R + LS    FW + +P ++P ++ 
Sbjct: 144 EEAKVFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARVYGLSPAALFWRIVLPGALPSILV 203

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          GIG     A +      ++  +L    +  L
Sbjct: 204 GLRYALGIMWLTLIVAETIS------STSGIGYMTMNAREFLQTDVVVLGVLAYALLGKL 257

Query: 255 YDQL---LFRPMIVWSNKFRLERTTG 277
            D L   +    + W   ++ +    
Sbjct: 258 ADSLTRAIEHRALAWHPAYQGKGLAA 283


>gi|315647775|ref|ZP_07900876.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315276421|gb|EFU39764.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 269

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 96/266 (36%), Gaps = 22/266 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHG-----IQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           R  P         + I  +  +  G           P  I            L ++   +
Sbjct: 17  RAVPGPLHAWLVPIAIVALWQIAGGLGWISATLLPTPLTIAKQFVSLGLSGELWEHFQIS 76

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR LS  V+  L            +     L P L +++++P+L  +   +++F     
Sbjct: 77  ILRALSGFVLGGLTGLALGLSTGLGKMAERTLDPSLQMLRTVPLLSLIPLFILWFGIGEF 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K++   L A F         M  + +  + ++   L +VSR F+ S  Q    L +P +
Sbjct: 137 SKILMISLGAFF--------PMYVNTFLGIRSVDVKLYDVSRIFQYSKLQLVIRLIIPAA 188

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +S+   W  +V +EM+          GIG  I  A        +   ++  
Sbjct: 189 LPNILLGIRLSLGVSWLVLVVAEMMGTSA------GIGYMIQDARAYSQTDIVFVGIIIF 242

Query: 249 LGVIFLYD---QLLFRPMIVWSNKFR 271
             V  L D   +LL   ++ W   ++
Sbjct: 243 AIVGKLSDSVVRLLESKLLRWRETYK 268



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 21/265 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---- 384
           +++L+       ++++ I     +  +A G+ W S   +    T       + L      
Sbjct: 13  QDWLRAVPGPLHAWLVPIA-IVALWQIAGGLGWISATLLPTPLTIAKQFVSLGLSGELWE 71

Query: 385 ---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I++ R +   ++  +  + +G+  G        + P  Q+L   P     PL +   
Sbjct: 72  HFQISILRALSGFVLGGLTGLALGLSTGLGKMAERTLDPSLQMLRTVPLLSLIPLFILWF 131

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +      L++  G  + +  N   G  +      +V+  F  +  +    +I+P 
Sbjct: 132 GIGEFSK----ILMISLGAFFPMYVNTFLGIRSVDVKLYDVSRIFQYSKLQLVIRLIIPA 187

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   + G +W   +V+E+         + G+G  I ++        V +G++I
Sbjct: 188 ALPNILLGIRLSLGVSWLVLVVAEMMG------TSAGIGYMIQDARAYSQTDIVFVGIII 241

Query: 562 MCCFVLALN---RFLWHPLYLYGTR 583
                   +   R L   L  +   
Sbjct: 242 FAIVGKLSDSVVRLLESKLLRWRET 266


>gi|311067368|ref|YP_003972291.1| aliphatic sulfonate ABC transporter permease [Bacillus atrophaeus
           1942]
 gi|310867885|gb|ADP31360.1| aliphatic sulfonate ABC transporter (permease) [Bacillus atrophaeus
           1942]
          Length = 277

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 13/173 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  I P  Q+L   P     PL +    +   +      LL+  G  + +  N   
Sbjct: 109 SRKTEHYIDPSLQMLRTVPHLAVTPLFILWFGFDETSK----ILLIALGAFFPVYINTFL 164

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G     +   +VA       +R    +ILP   P  + G   + G AW   +V+E+    
Sbjct: 165 GIRGVDSKLFDVAKVLEFPWYRQMTKLILPAALPSILLGIRLSLGIAWLGLVVAELMG-- 222

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                + G+G  I ++ +     +V +G++I        +   RFL   L  +
Sbjct: 223 ----SSEGIGYMIMDARQFSQTNKVFVGIIIFAVVGKLTDSFVRFLERKLLKW 271



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              + V  I  ++ +        P  I+      +    L  +   +  R  +  +    
Sbjct: 38  FVIIAVWQIAGSMEIVSATVLPTPLVILLTFKDLIVSGELFVHLKISVYRAAAGFLSGAG 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L   SR+    + P L +++++P L      +++F      K++   L A F 
Sbjct: 98  LGLLIGLLVGFSRKTEHYIDPSLQMLRTVPHLAVTPLFILWFGFDETSKILLIALGAFFP 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + +  +  +   L +V++      +++   L +P ++P ++  + +S+ 
Sbjct: 158 VY--------INTFLGIRGVDSKLFDVAKVLEFPWYRQMTKLILPAALPSILLGIRLSLG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++   +      GIG  I  A +      +   ++    V  L D   + 
Sbjct: 210 IAWLGLVVAELMGSSE------GIGYMIMDARQFSQTNKVFVGIIIFAVVGKLTDSFVRF 263

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W N ++
Sbjct: 264 LERKLLKWRNSYQ 276


>gi|218886146|ref|YP_002435467.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218757100|gb|ACL07999.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 280

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 15/240 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D L  +LVI  + ++   +                +    L Q    T   +L A +++
Sbjct: 47  LDALPPLLVIAFVGLVAWRVTRQVALGVFAVAGLALVWNMGLWQATMSTLALVLVATLLA 106

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L        AA S R   V++P+LD+MQ++P   +L   + +F           ++AA+
Sbjct: 107 VLVGIPLGIAAAMSDRARAVVMPVLDVMQTMPAFVYLIPAIPFFGLG--------KVAAV 158

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA     +          +  +P +L E + +F    +Q+   L +P + P ++  +  +
Sbjct: 159 FATVIFAMPPAIRFTCLGIRQVPAELVECAEAFGTGRFQRLVKLELPLAAPTMLAGVNQT 218

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      VV + MI          G+G  +  AI+  ++     A + ++ V    D++L
Sbjct: 219 VMLALSMVVIAAMI-------GARGLGGEVWKAIQRLEMGNGFEAGIGIVIVAICLDRIL 271



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 17/237 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
            LD     +V      +AW+    +         L ++W   +      T+  V+V  ++
Sbjct: 46  GLDALPPLLVIAFVGLVAWRVTRQVALGVFAVAGLALVWNMGLWQATMSTLALVLVATLL 105

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+GI         + + P   ++   PA V+    +       +       +  
Sbjct: 106 AVLVGIPLGIAAAMSDRARAVVMPVLDVMQTMPAFVYLIPAIPFFGLGKVAAVFATVIFA 165

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +     +       G    P +  E A +F    ++    + LP   P  + G       
Sbjct: 166 MPPAIRF----TCLGIRQVPAELVECAEAFGTGRFQRLVKLELPLAAPTMLAGVNQTVML 221

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A +  +++ +           GLG  + ++ ++          + +    + L+R L
Sbjct: 222 ALSMVVIAAMIG-------ARGLGGEVWKAIQRLEMGNGFEAGIGIVIVAICLDRIL 271


>gi|240144644|ref|ZP_04743245.1| binding-protein-dependent transport system inner membrane component
           [Roseburia intestinalis L1-82]
 gi|257203361|gb|EEV01646.1| binding-protein-dependent transport system inner membrane component
           [Roseburia intestinalis L1-82]
 gi|291540333|emb|CBL13444.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis XB6B4]
          Length = 260

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 13/209 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+++R+ +  + A ++ +P+GI +G      + I+P  + +   P   F PL
Sbjct: 61  GSLLQNTGISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPL 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V             ++  GT + ++  V   A A P+D      +      +    
Sbjct: 121 IMVWVGIE----ESAKITVIFIGTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFK 176

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P + P  +       G AW   + +E+ +        TGLG  I +S        + 
Sbjct: 177 ILIPAMMPRLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQRFLKTDAIF 230

Query: 557 LGVLIMCCFVLALNR---FLWHPLYLYGT 582
             ++++    L  +R   FL   L+ +  
Sbjct: 231 ANIILIGLLGLITDRIFAFLNKKLFPWAA 259



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 97/245 (39%), Gaps = 18/245 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +F +L+FV+V+    I              P+++V+    ++   SL Q    +  R+  
Sbjct: 17  LFAILSFVIVLAAWLIASESGAIKEIFLPKPQNVVNYYIESIKDGSLLQNTGISIYRITL 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V ++L       L    ++    + P+ + ++ +P+  F+   +V+            
Sbjct: 77  GFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVGIE-------- 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A I  IF    + +   +      +P DL     +   +  +  + + +P  MP L+ 
Sbjct: 129 ESAKITVIFIGTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMPRLME 188

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + M +   W ++V++E++          G+G  I  + +     AI   ++ +  +  +
Sbjct: 189 TLRMMIGWAWTYLVSAELVAANT------GLGYTILKSQRFLKTDAIFANIILIGLLGLI 242

Query: 255 YDQLL 259
            D++ 
Sbjct: 243 TDRIF 247


>gi|262277475|ref|ZP_06055268.1| glycine betaine/L-proline transport system permease protein ProW
           [alpha proteobacterium HIMB114]
 gi|262224578|gb|EEY75037.1| glycine betaine/L-proline transport system permease protein ProW
           [alpha proteobacterium HIMB114]
          Length = 295

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I +I  L     +         +  I + +  + +    T   +  A ++ LL    
Sbjct: 61  PIIIAVIAFLTWKASQKLSLVFGTVLSFIIIGLFGMWEDTMSTLAIISVATLLCLLIGAP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              + AKS ++ +V+ PILD MQ+IP   +L   ++       GKV G     I+AI   
Sbjct: 121 IGIVMAKSNKVSVVMSPILDTMQTIPTFVYLIPIIMLLG---IGKVPGLIAVCIYAIP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  +   L E  ++  +S +   + +  P ++P ++  +  ++     
Sbjct: 176 ---PIVRLTNLGIREVNAKLIEAGKALGISKFVILYRIEFPLALPSIMTGVNQTIMMSLA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI V        G+G  I  +I  Q L   L   L ++ +  ++D++
Sbjct: 233 MVVIASMIGVS-------GLGVPILRSISNQYLALGLMNGLAIVALAIIFDRI 278



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 17/237 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLII 395
            +L    + ++  V   + W++   +   F       +I L  +      T+  + V  +
Sbjct: 53  KLLINSPWPIIIAVIAFLTWKASQKLSLVFGTVLSFIIIGLFGMWEDTMSTLAIISVATL 112

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +  +I  P+GI +     +S  + P    +   P  V+   ++  +        +   + 
Sbjct: 113 LCLLIGAPIGIVMAKSNKVSVVMSPILDTMQTIPTFVYLIPIIMLLGIG----KVPGLIA 168

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I+     G         E   +  I+ +     I  P   P  +TG      
Sbjct: 169 VCIYAIPPIVRLTNLGIREVNAKLIEAGKALGISKFVILYRIEFPLALPSIMTGVNQTIM 228

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +    +++ +          +GLG  I  S         ++  L +    +  +R 
Sbjct: 229 MSLAMVVIASMIG-------VSGLGVPILRSISNQYLALGLMNGLAIVALAIIFDRI 278


>gi|104784101|ref|YP_610599.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95113088|emb|CAK17816.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Pseudomonas entomophila L48]
          Length = 281

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 96/244 (39%), Gaps = 18/244 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+    + +   +  L+      TV   +  ++ + L      Q    T  ++  A V+
Sbjct: 48  WFNPFVLIALFAALAHLIQRKWALTVFVALSFLLILNL---GYWQETMETLAQVTFATVV 104

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++        AA        + P+LD+MQ++P   +L  T+  F     G V G     
Sbjct: 105 CVVIGVPLGIAAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTV 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FAI            Y  +C++P++L +  ++F  S  Q    + +P +MP +   +  
Sbjct: 162 VFAIAAP-----IRLTYLGICDVPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGITQ 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + ++          G+G  +  A+   D+     A L ++ +  + D++
Sbjct: 217 CIMLSLSMVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRI 269

Query: 259 LFRP 262
             +P
Sbjct: 270 CKQP 273



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +          I   W    ++   F     L        T+ +V    ++  +I +P
Sbjct: 52  FVLIALFAALAHLIQRKWALTVFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVP 111

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + ++P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 112 LGIAAAHKPMFYTAMRPVLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  +  +    I LP   P    G       + +  ++
Sbjct: 169 IRL-TYLGICDVPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGITQCIMLSLSMVVI 227

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +             L +    + L+R    P
Sbjct: 228 AALVG-------ADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|317055240|ref|YP_004103707.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
 gi|315447509|gb|ADU21073.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
          Length = 306

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V      D+  ++    ++M  +    ++A I  IP+G+++G+   +    +  A  L 
Sbjct: 98  VVTEQFVSDLPRLMNDLAVSMITITTGYVLALITAIPIGLFLGWNAQVGKVGEQIANFLG 157

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P  VF P  ++ +  +          ++     + IL   ++G         E A  F
Sbjct: 158 SIPPIVFIPYTLALLPTF----KSCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIF 213

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +       ++LP   P    G       ++     +E+          +G+G YI   
Sbjct: 214 CPSKTYMLYSVLLPASLPQIFDGCNMGLLLSFILLTSAEMIGG------NSGIGFYIQYY 267

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
           T  G+F  +++G++ +   V  +   +
Sbjct: 268 TNFGNFTRIMVGIVFLGTIVTLVTNLV 294



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 91/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + +F+ +  ++      I +       V       D+  L    + + + + +  V++L+
Sbjct: 71  IFSFIGIWTLLTAKFVLIPQDIFKAPDVVTEQFVSDLPRLMNDLAVSMITITTGYVLALI 130

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      + ++G V   I + + SIP + F+ +T+              +  +IF 
Sbjct: 131 TAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALL--------PTFKSCSIFV 182

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF +  + +       + NI +   E ++ F  S     + + +P S+P +     M + 
Sbjct: 183 IFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKTYMLYSVLLPASLPQIFDGCNMGLL 242

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +  + ++EMI          GIG YI       +   I+  ++ +  ++ L   L+
Sbjct: 243 LSFILLTSAEMIGGNS------GIGFYIQYYTNFGNFTRIMVGIVFLGTIVTLVTNLV 294


>gi|150398342|ref|YP_001328809.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029857|gb|ABR61974.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 273

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 90/269 (33%), Gaps = 16/269 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
            H     L +   QR      +    +       I      Y            +I  G 
Sbjct: 7   IHLRPRTLWISRAQRRGTAGILAVLLLWQISVWIIDLPPYFYPAPRDVLAAFGELIRNGI 66

Query: 385 I------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      + +R  V +     + I  G+ IG     S  +    +   A     + PL+V
Sbjct: 67  LIEYLADSSWRYAVSVGTGLSLGIIFGLLIGLSGFWSRLLGSIIRFFYAIVEVAWIPLLV 126

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + Y      + +S ++ F     +L+N + G             +   + ++    +I
Sbjct: 127 IWIGYGFPTILIAISYVVFF----PVLYNTLTGVQTIQPVLINAVRTLGASRFQVLTSVI 182

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG     G A+   I +E+ + G      +GLG  I +         VV+G
Sbjct: 183 LPAALPNIMTGLRVGAGFAFRGLIFAEMIAAG------SGLGFLIFDGASTRQTDRVVVG 236

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           +++M    L ++R L  P+         L
Sbjct: 237 MIMMGLLWLLMDRLLLRPIERATIERWGL 265



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 98/256 (38%), Gaps = 15/256 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ISR        +LA +L+  I   ++         PRD++      +    L +Y + ++
Sbjct: 16  ISRAQRRGTAGILAVLLLWQISVWIIDLPPYFYPAPRDVLAAFGELIRNGILIEYLADSS 75

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R   ++   L    ++  L   S     +L  I+    +I  + ++   V++    +P 
Sbjct: 76  WRYAVSVGTGLSLGIIFGLLIGLSGFWSRLLGSIIRFFYAIVEVAWIPLLVIWIGYGFP- 134

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                    + AI     + + ++    +  I   L    R+   S +Q    + +P ++
Sbjct: 135 -------TILIAISYVVFFPVLYNTLTGVQTIQPVLINAVRTLGASRFQVLTSVILPAAL 187

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + +     +  ++ +EMI  G       G+G  I      +    ++  M+ M 
Sbjct: 188 PNIMTGLRVGAGFAFRGLIFAEMIAAGS------GLGFLIFDGASTRQTDRVVVGMIMMG 241

Query: 250 GVIFLYDQLLFRPMIV 265
            +  L D+LL RP+  
Sbjct: 242 LLWLLMDRLLLRPIER 257


>gi|54303455|ref|YP_133448.1| putative permease [Photobacterium profundum SS9]
 gi|46916885|emb|CAG23648.1| putative permease [Photobacterium profundum SS9]
          Length = 296

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VIG++         +      V +    + V  +     RT   +L + ++++      
Sbjct: 65  IVIGVLAGFAFMASRSWKLTVGVVVAFTLIGVFGMWDNTMRTMSIILVSTMVAIGVGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LDIMQ++P   +L   V+       GK+ G     I+A+    
Sbjct: 125 GIAMARSNRVQSVVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGVIAVVIYAVP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +             +W+    +V  FT   V  +      TM  ++V  ++A  
Sbjct: 60  GTPWWIVIGVLAGFAFMASRSWKLTVGVVVAFTLIGVFGMWDNTMRTMSIILVSTMVAIG 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 VGIPIGIAMARSNRVQSVVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGVIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A+++  +  +    + +P   P  + G       A  
Sbjct: 176 AVPPVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  + +S     F   +L  L +    +  +R 
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281


>gi|207722426|ref|YP_002252862.1| transmembranee protein [Ralstonia solanacearum MolK2]
 gi|206587605|emb|CAQ18187.1| transmembranee protein [Ralstonia solanacearum MolK2]
          Length = 298

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   LV       L          D    +   L   +L      +   +L+   + L 
Sbjct: 55  LVVLALVWEGGARWLDNPLLLPTFSDTAQALWAGLASGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   +R     L  +  +   +P +  L   +V+F             + +F 
Sbjct: 115 LSCALVVLGIGNRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGNG--------SLVFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++    +     G+G YI        +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVFGVSS--GQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 96/288 (33%), Gaps = 16/288 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +S         +   R    E  L L         L      VV  +      + +  
Sbjct: 12  ADISARAPVYRTPVDFERIGVVEKPLSLAERLVGHAWLRKLAILVVLALVWEGGARWLDN 71

Query: 367 IVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISS 416
            +   T+ D    +W G    T+F  +   +   +    +G+ +                
Sbjct: 72  PLLLPTFSDTAQALWAGLASGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGNRLGQD 131

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    P+ +      + +    L  +++    W +  N  AG  +  
Sbjct: 132 FLETLTAMFNPLPAIALLPIALVWFGLGNGS----LVFVIVHSVVWAVSLNTHAGFQSVS 187

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +    
Sbjct: 188 NTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            GLG YI E+      PEV  G+L +    L +   ++  L     + 
Sbjct: 246 GGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVKR 293


>gi|169797764|ref|YP_001715557.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184156368|ref|YP_001844707.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acinetobacter baumannii ACICU]
 gi|213155436|ref|YP_002317481.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter
           baumannii AB0057]
 gi|215485115|ref|YP_002327356.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|239503754|ref|ZP_04663064.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB900]
 gi|260557764|ref|ZP_05829978.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|301347644|ref|ZP_07228385.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB056]
 gi|301510765|ref|ZP_07236002.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB058]
 gi|301595708|ref|ZP_07240716.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB059]
 gi|332855716|ref|ZP_08436012.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332866684|ref|ZP_08437146.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|332873538|ref|ZP_08441487.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
 gi|169150691|emb|CAM88601.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183207962|gb|ACC55360.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii ACICU]
 gi|193075942|gb|ABO10522.2| alkanesulfonate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213054596|gb|ACJ39498.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter
           baumannii AB0057]
 gi|213988688|gb|ACJ58987.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Acinetobacter baumannii AB307-0294]
 gi|260408937|gb|EEX02241.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC
           19606]
 gi|322506238|gb|ADX01692.1| ssuC [Acinetobacter baumannii 1656-2]
 gi|323516114|gb|ADX90495.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Acinetobacter baumannii TCDC-AB0715]
 gi|332727302|gb|EGJ58742.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013150]
 gi|332734453|gb|EGJ65568.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6013113]
 gi|332738235|gb|EGJ69113.1| putative aliphatic sulfonates transport permease protein SsuC
           [Acinetobacter baumannii 6014059]
          Length = 265

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + +R+ P IF ++  V+     +  L   +    P  +V      L    L Q+   +  
Sbjct: 15  VGQRLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLLISGELWQHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  + I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALLGLFIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   QLL R ++ W   ++
Sbjct: 241 LGKLADVLAQLLERYLLRWHAGYQ 264



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q++   PA    PLV+                L+  G  + I  N  
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINTY 151

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S 
Sbjct: 152 HGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS- 210

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   G+G     + E      V++G+L+        +  
Sbjct: 211 -----AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248


>gi|296532027|ref|ZP_06894806.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267642|gb|EFH13488.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 280

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 86/274 (31%), Gaps = 12/274 (4%)

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
           +    +P +   +         R   P    +  S   +  +        +       A 
Sbjct: 4   TQAAIAPRALIERPATPRWHKPRLALPPRLRRFLSPLALVLLWQAASMAGLISPRTLAAP 63

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            +I       T      +     +++ RV+  + I     + + +  G        +   
Sbjct: 64  STILVAAWELTLS--GELPAHLAVSLGRVLAGLGIGLSAGVTLALIAGLSRLGEEIVDAP 121

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q+L   P     PL +                L+  G  + +   + AG         E
Sbjct: 122 MQMLRTLPFLALVPLFILWFGIGEAPK----IALVALGAAFPVYLTLFAGIRGVDPKLAE 177

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
               F +      R++ILPG  P  + G   A G AW + +++E  +       + G+G 
Sbjct: 178 AGRVFGLDRRGLVRHVILPGALPSALVGLRYALGSAWLSLVIAEQIN------ASAGIGF 231

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            I ++ E      +V+G+L+     L  +  +  
Sbjct: 232 LINDAREFLRTDIIVVGLLVYALLGLGADALVRR 265



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 100/256 (39%), Gaps = 20/256 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYA 65
           LPP + R + P     LA VL+    ++       T      + +    L +   LP + 
Sbjct: 29  LPPRLRRFLSP-----LALVLLWQAASMAGLISPRTLAAPSTILVAAWELTLSGELPAHL 83

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R+L+ + I L      A +A  SR    ++   + +++++P L  +   +++F  
Sbjct: 84  AVSLGRVLAGLGIGLSAGVTLALIAGLSRLGEEIVDAPMQMLRTLPFLALVPLFILWFGI 143

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K+    L A F ++         +++  +  +   L E  R F L       ++ +
Sbjct: 144 GEAPKIALVALGAAFPVY--------LTLFAGIRGVDPKLAEAGRVFGLDRRGLVRHVIL 195

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P  +  +  ++   W  +V +E I          GIG  I  A +      I+  +
Sbjct: 196 PGALPSALVGLRYALGSAWLSLVIAEQINASA------GIGFLINDAREFLRTDIIVVGL 249

Query: 246 LTMLGVIFLYDQLLFR 261
           L    +    D L+ R
Sbjct: 250 LVYALLGLGADALVRR 265


>gi|292487853|ref|YP_003530728.1| aliphatic sulfonate ABC transporter permease [Erwinia amylovora
           CFBP1430]
 gi|292899079|ref|YP_003538448.1| aliphatic sulfonates ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198927|emb|CBJ46037.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Erwinia amylovora ATCC 49946]
 gi|291553275|emb|CBA20320.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           amylovora CFBP1430]
 gi|312171975|emb|CBX80232.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia
           amylovora ATCC BAA-2158]
          Length = 263

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 101/259 (38%), Gaps = 18/259 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V +  + +       +    P  IV           L Q+ + ++ R      I   
Sbjct: 19  IVLVALWQLASWSGWLSTRILPSPAAIVAAFCKLSASGELWQHLAISSWRAAIGFSIGGA 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 79  IGLLLGLITGMSRLGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ETAKIFL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI   L E++RS+ LSGW  F  + +P ++P ++  +  ++ 
Sbjct: 131 VALGTLFPIYINTWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPGALPSMMVGVRFALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 191 LMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADASAQL 244

Query: 259 LFRPMIVWSNKFRLERTTG 277
           L R  + W   ++L+    
Sbjct: 245 LERTWLRWHPAYQLKEENP 263



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 89/271 (32%), Gaps = 27/271 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIW 381
              L+  ++  + + + I    +   +A    W S   + +                +  
Sbjct: 2   SRILKRIADALLPWAMPIVLVALWQ-LASWSGWLSTRILPSPAAIVAAFCKLSASGELWQ 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +   I   I + +G+  G        +    Q+L   P     PLV+   
Sbjct: 61  HLAISSWRAAIGFSIGGAIGLLLGLITGMSRLGERLLDTSVQMLRNVPHLALIPLVILWF 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G     +   E+A S+ ++GW  +  ++LPG
Sbjct: 121 GI----DETAKIFLVALGTLFPIYINTWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPG 176

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++
Sbjct: 177 ALPSMMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIIL 230

Query: 562 MCCFVLALNR---------FLWHPLYLYGTR 583
                   +            WHP Y     
Sbjct: 231 YALLGKLADASAQLLERTWLRWHPAYQLKEE 261


>gi|254695535|ref|ZP_05157363.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 3 str. Tulya]
          Length = 272

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGI-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 141 --DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILETGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI       DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILETGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|299538418|ref|ZP_07051701.1| glycine betaine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298726005|gb|EFI66597.1| glycine betaine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 284

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 99/236 (41%), Gaps = 17/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +L++ I    + G +       ++ ++ I      L  +   TT  ++ + +IS++ 
Sbjct: 56  IILILLVVIFAFFVSGKKLGLAAFSLIGLLFIY--NQGLWTHLMETTTLVIFSSIISIII 113

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L +KS     ++ PILD MQ++P   +L   V +F     G V G   + IFA 
Sbjct: 114 GIPLGILMSKSTVAENIIKPILDFMQTMPGFVYLIPAVAFFG---IGIVPGVFASVIFA- 169

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  +P++L E + S+  +  QK + + +P +   ++  +  ++  
Sbjct: 170 ----LPPTVRMTNLGIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVML 225

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI         PG+G  +  A++   +     A L ++    + D+L
Sbjct: 226 SLSMVVIASMI-------GAPGLGREVLTALQRTQVGNGFVAGLGLVIFAIIIDRL 274



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 17/254 (6%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW-QSIGYIVNHFTYQDVLYVIWLG 383
           F+  + F +L  NQ    ++ I    ++  V I   +       +  F+   +L++   G
Sbjct: 32  FNSIQQFGKLLMNQVTDLLISIPAIILILLVVIFAFFVSGKKLGLAAFSLIGLLFIYNQG 91

Query: 384 C-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  T   V+   II+ II IP+GI +       + I+P    +   P  V+    V
Sbjct: 92  LWTHLMETTTLVIFSSIISIIIGIPLGILMSKSTVAENIIKPILDFMQTMPGFVYLIPAV 151

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      +       +          +     G    P +  E A S+  T  +    + 
Sbjct: 152 AFFGIGIVPGVFASVIF----ALPPTVRMTNLGIRQVPKELVEAADSYGSTASQKLFKVE 207

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P      + G       + +  +++ +           GLG  +  + ++       + 
Sbjct: 208 IPLAKSTIMAGINQTVMLSLSMVVIASMIG-------APGLGREVLTALQRTQVGNGFVA 260

Query: 559 VLIMCCFVLALNRF 572
            L +  F + ++R 
Sbjct: 261 GLGLVIFAIIIDRL 274


>gi|226952298|ref|ZP_03822762.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ATCC 27244]
 gi|226836964|gb|EEH69347.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ATCC 27244]
          Length = 267

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I++ + P +F +L   +     +  +   +    P  +V      L    L Q+   +  
Sbjct: 17  ITKGLLPWLFPILLLSIWQIASSSGILQNRVLPAPSAVVSAFWQLLVSGELWQHVQVSAG 76

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 77  RALLGLLIGGGLDLILGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGID---- 132

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + M  + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP
Sbjct: 133 ----ETAKLFLVAVGVFFPMYINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMP 188

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S+   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 189 SILVGLRFSLGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDIVLVGILLYAL 242

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R ++ W   ++
Sbjct: 243 LGKLADVLAQALERYLLRWHAGYQ 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + +  N 
Sbjct: 97  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPMYINT 152

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ +  W+ ++ IILPG  P  + G   + G  W   IV+E  S
Sbjct: 153 YHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS 212

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 213 ------AQAGIGYMTMNAREFLQTDIVLVGILLYALLGKLADVL 250


>gi|90410058|ref|ZP_01218075.1| putative permease [Photobacterium profundum 3TCK]
 gi|90329411|gb|EAS45668.1| putative permease [Photobacterium profundum 3TCK]
          Length = 296

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VIG++         +      V +    + V  +     RT   +L + ++++      
Sbjct: 65  IVIGVLAGFAFMASRSWKLTVGVVVAFSLIGVFGMWDNTMRTMSIILVSTMVAIGVGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LDIMQ++P   +L   V+       GK+ G     I+A+    
Sbjct: 125 GIAMARSNRVQSVVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGVIAVVIYAVP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +             +W+    +V  F+   V  +      TM  ++V  ++A  
Sbjct: 60  GTPWWIVIGVLAGFAFMASRSWKLTVGVVVAFSLIGVFGMWDNTMRTMSIILVSTMVAIG 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 VGIPIGIAMARSNRVQSVVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGVIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A+++  +  +    + +P   P  + G       A  
Sbjct: 176 AVPPVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +           GLG  + +S     F   +L  L +    +  +R 
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281


>gi|325970411|ref|YP_004246602.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025649|gb|ADY12408.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 270

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ RV++   +A I  IPV   +G+ P + + ++P+ Q L   P     PLV+  +   
Sbjct: 81  ISLQRVLIGFGLAFICSIPVSFLMGWYPTVRNLVEPWIQFLRTIPPIALIPLVILAMGLG 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++       ++  +  G           A +F  +    +  I++P  FP
Sbjct: 141 ESPKYT----IIFVAAFLVMVVTIYQGVKEVDKTLIRAAYTFGASDKDLFFDIVIPASFP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y + GA      +    I +E+         T GLGA I  + +      V+LG++ +  
Sbjct: 197 YILVGARLGMAASLTTLIAAEL------TGTTFGLGARIQGAQQFMDTSIVLLGIITIGI 250

Query: 565 FVLALNRFL 573
               L++ L
Sbjct: 251 IGFVLDKIL 259



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 98/243 (40%), Gaps = 15/243 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  ++   L+  +I ++         P+ +   ++  T+      +  S +  R+L    
Sbjct: 32  VISIIGGFLLWAVITLIPTINTFLASPKQVFAALISETMANGRYFKDISISLQRVLIGFG 91

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ + +   + L      +  ++ P +  +++IP +  +   ++        K     +A
Sbjct: 92  LAFICSIPVSFLMGWYPTVRNLVEPWIQFLRTIPPIALIPLVILAMGLGESPKYTIIFVA 151

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A           M  ++YQ +  + + L   + +F  S    F+ + +P S P ++    
Sbjct: 152 AFLV--------MVVTIYQGVKEVDKTLIRAAYTFGASDKDLFFDIVIPASFPYILVGAR 203

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + M+     ++A+E+           G+G+ I  A +  D   +L  ++T+  + F+ D+
Sbjct: 204 LGMAASLTTLIAAEL------TGTTFGLGARIQGAQQFMDTSIVLLGIITIGIIGFVLDK 257

Query: 258 LLF 260
           +L 
Sbjct: 258 ILL 260


>gi|298290864|ref|YP_003692803.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927375|gb|ADH88184.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 287

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 25/261 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG---------------YIVNHFT 372
           P +  +   ++R           +   V   +AW+                   +     
Sbjct: 15  PRHGWRGGRSERQLLGWHRALLGLALPVGAALAWEVAVRAGLAQGRLLPAPSFLLATLAD 74

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +      T+ RV     +        G   G      + I P  Q L A P+  
Sbjct: 75  LARSGDLDLHIRATLARVAAGFALGVAAGTLFGALAGASGLARALIDPTLQGLRAIPSIA 134

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL +  +  +  +       L+  G  + +    +    +      EV  SF +T  +
Sbjct: 135 WVPLFILWLGIFEASK----VTLIAVGVAFPVYLGTLGAILSVDRKIIEVGRSFRLTRLQ 190

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I+LP + P+Y+    +  G  W   + +E          + GLG  + +  + G  
Sbjct: 191 LARRILLPAVLPHYIVALRSGLGLGWMFVVAAEFMG------ASEGLGYLLVDGQQLGKP 244

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            ++V  +++        +  L
Sbjct: 245 AQIVAAIVVFAVLGKLTDALL 265



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 97/249 (38%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A    + +   L  G +    P  ++  +        L  +   T  R+ +   + +  
Sbjct: 44  AALAWEVAVRAGLAQG-RLLPAPSFLLATLADLARSGDLDLHIRATLARVAAGFALGVAA 102

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++  LA  S     ++ P L  +++IP + ++   +++            E + +  I
Sbjct: 103 GTLFGALAGASGLARALIDPTLQGLRAIPSIAWVPLFILWLGIF--------EASKVTLI 154

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +      ++ ++ R + EV RSFRL+  Q    + +P  +P  +  +   +  
Sbjct: 155 AVGVAFPVYLGTLGAILSVDRKIIEVGRSFRLTRLQLARRILLPAVLPHYIVALRSGLGL 214

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260
           GW FVVA+E +   +      G+G  +    +      I+ A++    +  L D LL   
Sbjct: 215 GWMFVVAAEFMGASE------GLGYLLVDGQQLGKPAQIVAAIVVFAVLGKLTDALLVAA 268

Query: 261 -RPMIVWSN 268
             P++ W +
Sbjct: 269 SSPLLRWED 277


>gi|259418394|ref|ZP_05742312.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259345789|gb|EEW57633.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 269

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 78/241 (32%), Gaps = 10/241 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P N   +     V  +  + W   V  ++     +                       ++
Sbjct: 22  PGNRRWVGLAVFVVVIGFVEWGTRVGFISALTLPKPSDVFATLVELWQSGLFFKHMGPSL 81

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+ V   + + + + VGI IG   +I + + P    +   P     PL V        +
Sbjct: 82  TRLAVGAALGASLGVGVGILIGLFSYIRAGLVPVMAAIFPIPKIALLPLFVIWFGIDEGS 141

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ FGT    +                +  SF ++     R I+LPG  P  +
Sbjct: 142 K----YALIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGIL 197

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   +   A    + +E+           G+GAYI E+        +  GV+I+    +
Sbjct: 198 SGLRISLAIAIILLVAAEMLG------AQYGIGAYILEAGSLYDLERLFAGVVILSLLGV 251

Query: 568 A 568
            
Sbjct: 252 L 252



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 24/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQ-------ETTVPRDIVDIVPITLDVHSLPQYASR 67
             P     +   + + +I  +  G +           P D+   +          ++   
Sbjct: 20  FAPGNRRWVGLAVFVVVIGFVEWGTRVGFISALTLPKPSDVFATLVELWQSGLFFKHMGP 79

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     +          L      +   LVP++  +  IP +  L   V++F    
Sbjct: 80  SLTRLAVGAALGASLGVGVGILIGLFSYIRAGLVPVMAAIFPIPKIALLPLFVIWFGIDE 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K           I          + Y ++ N+ R L  + +SF LS       + +P 
Sbjct: 140 GSKYA--------LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWLSIVRKIVLPG 191

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MPG++  + +S++     +VA+EM+          GIG+YI  A    DL  +   ++ 
Sbjct: 192 AMPGILSGLRISLAIAIILLVAAEMLG------AQYGIGAYILEAGSLYDLERLFAGVVI 245

Query: 248 MLGVIFL---YDQLLFRPMIVW 266
           +  +  L      ++ R ++ W
Sbjct: 246 LSLLGVLTSGAIGMIERRVLGW 267


>gi|163758500|ref|ZP_02165588.1| glycine betaine/L-proline transport system permease, putative
           [Hoeflea phototrophica DFL-43]
 gi|162284789|gb|EDQ35072.1| glycine betaine/L-proline transport system permease, putative
           [Hoeflea phototrophica DFL-43]
          Length = 513

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + +LL  +                + +      A  T   + +A  +S+L     
Sbjct: 291 IVIASLIVLLTWLTAGIRTAIWSAAFLSYMGLLGFWDKAMTTLALLGTAACLSILIGIPL 350

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+  R    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 351 GMFCARRPRFYSFIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 402

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 403 GTPVVRLTVLGLRGVPDSVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIMLSLAM 462

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A   +L    + D+++
Sbjct: 463 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    +V    +    ++  +     +Y  +L        T+  +     ++ +
Sbjct: 286 VSTPWIVIASLIVLLTWLTAGIRTAIWSAAFLSYMGLLGFWDKAMTTLALLGTAACLSIL 345

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   S IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 346 IGIPLGMFCARRPRFYSFIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 402

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P+  +E A SF    W     + LP   P    G       +  
Sbjct: 403 GT-PVVRLTVLGLRGVPDSVREAAISFGANKWYLLTRVDLPLASPSIRAGINQTIMLSLA 461

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 462 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFAILFCAMILDRIV 508


>gi|238027525|ref|YP_002911756.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
 gi|237876719|gb|ACR29052.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
          Length = 278

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 12/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
               +  +   V   L   W       A+   +  + +  +   ++  +   +     ++
Sbjct: 22  RRAWRAIAPWLVPIALVAAWELAARTGALSTRVLPEPLAVLRAAWSLIESGEMWANVKVS 81

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R ++   +   + + +G+  G        +    Q++   PA    PLV+        
Sbjct: 82  TWRALLGFALGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI--- 138

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + I  N   G  +   +  E+A S+ + G   +R +ILPG  P  
Sbjct: 139 -DEKAKLFLVSLGVFFPIYINTYHGIRSVDANLIEMARSYGVKGLALYRDVILPGALPSI 197

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+     
Sbjct: 198 LVGVRFALGLTWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAILG 251

Query: 567 LALNRF 572
              +  
Sbjct: 252 KLADVL 257



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 93/262 (35%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        +A V    +         +    P  ++      ++   +      +T R 
Sbjct: 26  RAIAPWLVPIALVAAWELAARTGALSTRVLPEPLAVLRAAWSLIESGEMWANVKVSTWRA 85

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    +              S+   + L   + ++++IP L  +   +++F         
Sbjct: 86  LLGFALGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 139

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E++RS+ + G   +  + +P ++P +
Sbjct: 140 --EKAKLFLVSLGVFFPIYINTYHGIRSVDANLIEMARSYGVKGLALYRDVILPGALPSI 197

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 198 LVGVRFALGLTWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAILG 251

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   L R  + W   ++
Sbjct: 252 KLADVLAKWLERTTLRWHPAYQ 273


>gi|153008760|ref|YP_001369975.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151560648|gb|ABS14146.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 257

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 10/169 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RV+   ++AS++ IP+GI +G    I + ++PF       PA+ F PL++     
Sbjct: 65  GMTVWRVLGGFVLASVVAIPLGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWSGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     L++  G  + I+  +    S    D  E A +   +     R +++P   
Sbjct: 125 GETQK----LLVIFIGAVFQIILMIAVTVSNTRRDLVEAAYTLGASNSGIIRRVLMPASA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           P          G AW   IV+E+         ++G+G  I  S    + 
Sbjct: 181 PDIAETLRLVLGWAWTYVIVAELIG------ASSGIGYMIINSQALMAT 223



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 15/207 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R+L   V++ +            + +  +L P +   + +P   F+   +++   
Sbjct: 65  GMTVWRVLGGFVLASVVAIPLGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWSGI 124

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K++         IF   V+ +   +  ++ N  RDL E + +   S       + +
Sbjct: 125 GETQKLL--------VIFIGAVFQIILMIAVTVSNTRRDLVEAAYTLGASNSGIIRRVLM 176

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S P +   + + +   W +V+ +E+I          GIG  I  +        I++ +
Sbjct: 177 PASAPDIAETLRLVLGWAWTYVIVAELIGASS------GIGYMIINSQALMATGQIIFGI 230

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRL 272
           + +  +  + D L F+    W   +R 
Sbjct: 231 IVIGVIGLISD-LAFKYFNRWLFAWRF 256


>gi|83745558|ref|ZP_00942616.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207738911|ref|YP_002257304.1| transmembranee protein [Ralstonia solanacearum IPO1609]
 gi|83727635|gb|EAP74755.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206592282|emb|CAQ59188.1| transmembranee protein [Ralstonia solanacearum IPO1609]
          Length = 298

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   LV       L          D    +   L   +L      +   +L+   + L 
Sbjct: 55  LVVLALVWEGGARWLDNPLLLPTFSDTAQALWAGLAGGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   +R     L  +  +   +P +  L   +V+F             + +F 
Sbjct: 115 LSCALVVLGIGNRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGNG--------SLVFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++    +     G+G YI        +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVFGVSS--GQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 16/266 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--T 386
           E  L L         L      VV  +      + +   +   T+ D    +W G    T
Sbjct: 34  EKPLSLAERLVGHAWLRKLAILVVLALVWEGGARWLDNPLLLPTFSDTAQALWAGLAGGT 93

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +F  +   +   +    +G+ +                 ++    +    PA    P+ +
Sbjct: 94  LFARIGTSMQTLLAGYALGLALSCALVVLGIGNRLGQDFLETLTAMFNPLPAIALLPIAL 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 + +    L  +++    W +  N  AG  +  N  + V  ++ ++G  +   I+
Sbjct: 154 VWFGLGNGS----LVFVIVHSVVWAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKIL 209

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P  FP  +TG       AW   I SE+     +     GLG YI E+      PEV  G
Sbjct: 210 IPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQGGLGWYIYENKNLLQIPEVFAG 267

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L +    L +   ++  L     + 
Sbjct: 268 LLTVILIGLLVENLVFRTLEARTVKR 293


>gi|150015504|ref|YP_001307758.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149901969|gb|ABR32802.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 261

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            ++ +  +       +  GI  + +       T      ++    +T  R ++   +A I
Sbjct: 22  AAFFVIWYLATSTGILDTGIIPEPLKVFNQLATNIFKGDLLSHTLLTFKRAIIGFFVALI 81

Query: 400 IWIPVGIWIGF-RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           + + +G ++      + + + P  Q          FPL +        +      +++ +
Sbjct: 82  VGLLIGFFLASISKKLRNYVIPILQFFEKLNPFALFPLFMLFFGIGEFSK----VIIIFW 137

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W I+F+ IAG         + A +   +    +  +ILP   P  +TG   +   A+
Sbjct: 138 VAVWPIIFHTIAGVEGVDKLLIKSARTIGASPKTEFFKVILPAALPDIITGIKFSAQIAF 197

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              I +E+ S       + GLG +I+ +  + + P +  G L +    + +N+ L
Sbjct: 198 ILVISAEMLS------SSAGLGWFISIAKTQYNLPNLYGGTLFVAALGITINKIL 246



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 91/216 (42%), Gaps = 15/216 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT-LAAKSRRLGMVLVPI 103
           P  + + +   +    L  +   T  R +    ++L+   +    LA+ S++L   ++PI
Sbjct: 45  PLKVFNQLATNIFKGDLLSHTLLTFKRAIIGFFVALIVGLLIGFFLASISKKLRNYVIPI 104

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L   + +         +++F           E + +  IF   VW + F     +  + +
Sbjct: 105 LQFFEKLNPFALFPLFMLFFGIG--------EFSKVIIIFWVAVWPIIFHTIAGVEGVDK 156

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L + +R+   S   +F+ + +P ++P ++  +  S    +  V+++EM+          
Sbjct: 157 LLIKSARTIGASPKTEFFKVILPAALPDIITGIKFSAQIAFILVISAEMLSSSA------ 210

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G +I++A  + +L  +    L +  +    +++L
Sbjct: 211 GLGWFISIAKTQYNLPNLYGGTLFVAALGITINKIL 246


>gi|323702426|ref|ZP_08114090.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
 gi|323532565|gb|EGB22440.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum nigrificans DSM 574]
          Length = 255

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++ +RV+V + I+ ++ +P+G+  G    +   + P   L+   P  VF P+++     
Sbjct: 64  YVSTYRVLVSLGISLLLAVPMGMVAGREEKLDRYLAPLIYLVYPIPKIVFLPILMILFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++    +S ++ F     IL      A     +      S   T    +R+++ P + 
Sbjct: 124 GDVSKIALISFVLFF----QILVTTRDAARGINKEVITSVLSLGATRRDIYRHVVWPAVI 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T    A G A      +E  +         GLG Y+ ++    ++ E+  G++ M 
Sbjct: 180 PEVLTSLRIASGTAIAVLFFAETVASRE------GLGYYLLDAWSMYAYKEMFAGIIAMG 233

Query: 564 CFVLAL 569
                +
Sbjct: 234 LLGFII 239



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 95/245 (38%), Gaps = 15/245 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTL 70
             +    I  + + +L   +++ LL      T+P  ++       ++  +L  +   +T 
Sbjct: 9   GHKQISTILSIASLLLFWQLLSALLEMNGINTLPGPVLSFKTFFTEMTKTLWYHFYVSTY 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L ++ ISLL       +A +  +L   L P++ ++  IP + FL   ++ F       
Sbjct: 69  RVLVSLGISLLLAVPMGMVAGREEKLDRYLAPLIYLVYPIPKIVFLPILMILFGLG---- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +++ I  I     + +  +   +   I +++     S   +    + ++  P  +P
Sbjct: 125 ----DVSKIALISFVLFFQILVTTRDAARGINKEVITSVLSLGATRRDIYRHVVWPAVIP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++ ++ ++       +  +E +          G+G Y+  A        +   ++ M  
Sbjct: 181 EVLTSLRIASGTAIAVLFFAETVA------SREGLGYYLLDAWSMYAYKEMFAGIIAMGL 234

Query: 251 VIFLY 255
           + F+ 
Sbjct: 235 LGFII 239


>gi|284518809|gb|ADB92526.1| sulfonate permease [Desulfotignum phosphitoxidans]
          Length = 267

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 12/258 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQD 375
           R      F F +   +L     +  M+   W  +V    +   +  +      +  TY  
Sbjct: 2   RCPMRDDFQFGKKAGRLLIKIILPAMIIAGWQILVIYGDLPPILLPKLEKVGADFITYLM 61

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    I++ R  +     S   I +GI +G+   +            + P     P
Sbjct: 62  NGELLHHVLISLRRCAIGFFAGSATGIAMGILLGWFRRLEDFFDVTLNFSRSIPKTALAP 121

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++    +     +    LL+  G  +Y +   + G     N   + A S      +   
Sbjct: 122 LLIVWFGFG----DFPKVLLIGLGAFFYTVIPTLEGVRNVDNLLVKSARSMGANDRQIVL 177

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP   P    G   A   ++   +  E+ S        +GLG  +  S E  +   +
Sbjct: 178 SVILPASMPSIYAGIRIAAASSFVILLFVEIISG------NSGLGFLLENSRESLNTSTM 231

Query: 556 VLGVLIMCCFVLALNRFL 573
            + ++++     +L+  +
Sbjct: 232 FMTLIVVGILGFSLDWLV 249



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L  +   +  R                 L    RRL       L+  +SIP    
Sbjct: 60  LMNGELLHHVLISLRRCAIGFFAGSATGIAMGILLGWFRRLEDFFDVTLNFSRSIPKTAL 119

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V+F      KV+   L A F               + + N+   L + +RS   +
Sbjct: 120 APLLIVWFGFGDFPKVLLIGLGAFF--------YTVIPTLEGVRNVDNLLVKSARSMGAN 171

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P SMP +   + ++ +  +  ++  E+I          G+G  +  + + 
Sbjct: 172 DRQIVLSVILPASMPSIYAGIRIAAASSFVILLFVEIISGNS------GLGFLLENSRES 225

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            +   +   ++ +  + F  D L+
Sbjct: 226 LNTSTMFMTLIVVGILGFSLDWLV 249


>gi|332712420|ref|ZP_08432347.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
 gi|332348894|gb|EGJ28507.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
          Length = 279

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----- 384
             ++      +S  L I    V   V I ++++ +       +   VL   W        
Sbjct: 19  WSIRQGFPGWLSIFLTIIALVVPLLVWIVLSYEELVDPRFLPSPMVVLKAGWKMLTEEQL 78

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 +  RV+V  + A+++ IP+GI +G    + S       ++   P   F PL+V 
Sbjct: 79  LTDIIASFTRVLVGFLFAAVVGIPIGIAMGTFYSMESLFGTIVGIVRYMPVAAFMPLIVL 138

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                         L++  G  +Y    +       P++   VA +           +IL
Sbjct: 139 WAGLGET----AKILIIFLGIVFYNAIMIADAVKFIPDEMLNVAYTLGANRVDVLFRVIL 194

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  +        GAWN  +++E+ +         GLG  I          +V+  +
Sbjct: 195 PATLPNIIDTMRVNVAGAWNFLVIAELIA------AENGLGFKIIYFQRFLETDKVLFCI 248

Query: 560 LIMCCFVLALNRFLWHPLYLYG 581
           L++    L L+ F +  L+   
Sbjct: 249 LVIGLIGLMLD-FAFRWLFRLT 269



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 104/258 (40%), Gaps = 23/258 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSA 75
           L    LV+ ++  ++   +E   PR +   + +       L    L      +  R+L  
Sbjct: 33  LTIIALVVPLLVWIVLSYEELVDPRFLPSPMVVLKAGWKMLTEEQLLTDIIASFTRVLVG 92

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            + + +              +  +   I+ I++ +P+  F+   V++            E
Sbjct: 93  FLFAAVVGIPIGIAMGTFYSMESLFGTIVGIVRYMPVAAFMPLIVLWAGLG--------E 144

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A I  IF   V+     +  ++  IP ++  V+ +   +     + + +P ++P ++  
Sbjct: 145 TAKILIIFLGIVFYNAIMIADAVKFIPDEMLNVAYTLGANRVDVLFRVILPATLPNIIDT 204

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           M ++++G W F+V +E+I   +      G+G  I    +  +   +L+ +L +  +  + 
Sbjct: 205 MRVNVAGAWNFLVIAELIAAEN------GLGFKIIYFQRFLETDKVLFCILVIGLIGLML 258

Query: 256 DQL---LFRPMIVWSNKF 270
           D     LFR  + WS +F
Sbjct: 259 DFAFRWLFRLTVPWSEQF 276


>gi|302390154|ref|YP_003825975.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302200782|gb|ADL08352.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 277

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 72/197 (36%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++   I+  R+ +  I  ++  + +G+ +G  P + + + P   +    P     PL
Sbjct: 78  GELLYHTLISAGRIFLGFIAGAVPGVILGLSMGLFPPVRALLMPLVAVTFPIPKLAIMPL 137

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +        +  G  + +L N +AG       + +VA SF     +++  
Sbjct: 138 ILIVFGLGETSK----IFTIAIGVFYLVLINTMAGVLNIDTIYMDVARSFGANRAQFYTT 193

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  PG  P    G     G A    + +E+           G+G  I  + +     ++ 
Sbjct: 194 VAFPGALPMIFAGLKLGMGTALLLIVAAEL------SAAQAGVGWMIWRAYDMFDIEKMF 247

Query: 557 LGVLIMCCFVLALNRFL 573
             ++++       +  L
Sbjct: 248 CALIVLAILGYIFSYAL 264



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 86/230 (37%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I   +   +    L  +   +  R+    +   +   +          +  +L+P
Sbjct: 62  SSPSRIFATLVPLISSGELLYHTLISAGRIFLGFIAGAVPGVILGLSMGLFPPVRALLMP 121

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +   IP L  +   ++ F           E + IF I     + +  +    + NI 
Sbjct: 122 LVAVTFPIPKLAIMPLILIVFGLG--------ETSKIFTIAIGVFYLVLINTMAGVLNID 173

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +V+RSF  +  Q +  +  P ++P +   + + M      +VA+E+          
Sbjct: 174 TIYMDVARSFGANRAQFYTTVAFPGALPMIFAGLKLGMGTALLLIVAAEL------SAAQ 227

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            G+G  I  A    D+  +  A++ +  + +++      + + +I W N+
Sbjct: 228 AGVGWMIWRAYDMFDIEKMFCALIVLAILGYIFSYALDFVEKVVIPWKNR 277


>gi|221370083|ref|YP_002521179.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221163135|gb|ACM04106.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 273

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 95/263 (36%), Gaps = 15/263 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             + L R + V++F  P   L L     V   L            +  A + +G      
Sbjct: 4   GFRLLDRAIVVVQFLLPILGLLLLWELAVRTGLAQASILPAPSTILARAVELLGL----- 58

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              D   +      ++ R ++   +A  + +P+G  +G        + P   L+   PA 
Sbjct: 59  -TGDRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWVSPILSLMLPLPAV 117

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + P+++       L     + ++   G  + +L++ + G  A       V  S   +  
Sbjct: 118 AWTPILLVVFGPGDLT----IVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSRL 173

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              R +++P   P  +TG       +W   + +E+ +       ++GLG  I  +     
Sbjct: 174 DVLRRVLIPASLPALITGFKLGMAHSWRTLVAAEMLA-----ALSSGLGYMIFSARSYMD 228

Query: 552 FPEVVLGVLIMCCFVLALNRFLW 574
              + +GV+ +    +A+   L+
Sbjct: 229 VSTMFVGVVCLAAIGMAIEHLLF 251



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  +   +  R L A  +++        L   SR   + + PIL +M  +P + + 
Sbjct: 61  DRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWVSPILSLMLPLPAVAWT 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V F           +L  +   F   V+ + +S  Q +         V RS   S 
Sbjct: 121 PILLVVFGPG--------DLTIVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSR 172

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P S+P L+    + M+  W  +VA+EM+    +     G+G  I  A    
Sbjct: 173 LDVLRRVLIPASLPALITGFKLGMAHSWRTLVAAEMLAALSS-----GLGYMIFSARSYM 227

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
           D+  +   ++ +  +    + LLF
Sbjct: 228 DVSTMFVGVVCLAAIGMAIEHLLF 251


>gi|160901253|ref|YP_001566835.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160366837|gb|ABX38450.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 241

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 13/229 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++            A    W S+  +    T  D+        +++ RV V +++A ++ 
Sbjct: 14  WVGGALLARSTPVAAAFAPWPSLQALGQLLTGADIW---MHTLLSLQRVAVGLLLAFVVG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +G     S    P  Q L       + P+ V  +          +  L+ F   
Sbjct: 71  VPLGVLVGLSRGFSQAFSPVFQFLRMISPLSWMPIAVMVLGVGDA----PVYFLLAFAAV 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W IL +  AG +    ++  +A S   T       ++LPGI    +TG   A G  W   
Sbjct: 127 WPILLSTAAGVAQLDRNWLLLARSLSATRTETVLRVVLPGITAQILTGVRLAIGIIWIVL 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+         + GLG +I ++ ++ ++ E++  V+++     AL+
Sbjct: 187 VPAEMLG------VSAGLGYFILDTRDRLAYSELMAAVVLIGALGYALD 229



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 80/229 (34%), Gaps = 14/229 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V G +      +     P   +  +   L    +  +   +  R+   ++++ +      
Sbjct: 15  VGGALLARSTPVAAAFAPWPSLQALGQLLTGADIWMHTLLSLQRVAVGLLLAFVVGVPLG 74

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L   SR       P+   ++ I  L ++   V+             +    F +  + V
Sbjct: 75  VLVGLSRGFSQAFSPVFQFLRMISPLSWMPIAVMVLGVG--------DAPVYFLLAFAAV 126

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           W +  S    +  + R+   ++RS   +  +    + +P     ++  + +++   W  +
Sbjct: 127 WPILLSTAAGVAQLDRNWLLLARSLSATRTETVLRVVLPGITAQILTGVRLAIGIIWIVL 186

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           V +EM+ V        G+G +I           ++ A++ +  + +  D
Sbjct: 187 VPAEMLGVSA------GLGYFILDTRDRLAYSELMAAVVLIGALGYALD 229


>gi|260221625|emb|CBA30376.1| hypothetical protein Csp_C23240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 279

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 92/278 (33%), Gaps = 26/278 (9%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS-IGYIVNHFTYQDVL 377
           T G +        + L   +RV +        V       +A +  +          +VL
Sbjct: 7   TAGAVPLVLSTPSVWLRVLRRVLHWGWRSALVVALAAWWELAPRLELTDPAFFPPLSEVL 66

Query: 378 YVIWLGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              W   +          ++ R +    IA +  +P+G+ IG+   +   + P  +LL  
Sbjct: 67  AAGWALALNGQLWQHTSASVGRALGGFGIAVLYAVPLGLAIGWYRSLGDFLNPLIELLRN 126

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
             A    P+ +  +    ++       ++++   W +L N IA          + A +  
Sbjct: 127 TAALALLPVFILLLGIGEVSK----VAMVVYACSWPLLLNTIAAVKQVDPLLIKSARTMG 182

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  + +  +ILP   P    G   A   +    + +E+          +GLG  I  + 
Sbjct: 183 ASARQLFIKVILPASVPTIFVGIRLASATSILVLVAAEMVG------AKSGLGYLIIYAQ 236

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                 ++  G++ +    +  N  L         R L
Sbjct: 237 YSFLIADMYFGIIAITVIGVVFNALL-----QVAERRL 269



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 86/211 (40%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q+ S +  R L    I++L+           R LG  L P+++++++   L  L  
Sbjct: 76  GQLWQHTSASVGRALGGFGIAVLYAVPLGLAIGWYRSLGDFLNPLIELLRNTAALALLPV 135

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++             E++ +  +  +  W +  +   ++  +   L + +R+   S  Q
Sbjct: 136 FILLLGIG--------EVSKVAMVVYACSWPLLLNTIAAVKQVDPLLIKSARTMGASARQ 187

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S+P +   + ++ +     +VA+EM+          G+G  I  A     +
Sbjct: 188 LFIKVILPASVPTIFVGIRLASATSILVLVAAEMVGAKS------GLGYLIIYAQYSFLI 241

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             + + ++ +  +  +++ LL    R +  W
Sbjct: 242 ADMYFGIIAITVIGVVFNALLQVAERRLTAW 272


>gi|307328637|ref|ZP_07607810.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306885749|gb|EFN16762.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 300

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 86/269 (31%), Gaps = 19/269 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
                       + +  S +  +  +  +  + I +  +   +       ++    +  G
Sbjct: 25  PRPLRRRPWVRYALRTGSLLAALGLWQALTTLDINLWLRFAQFPSATDVIREFADRLGTG 84

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   ++ R++    +A+++ + VG  I   P +S  + P  ++    PA    P+ 
Sbjct: 85  AYWQDLTDSLTRILTGFALAAVLGVAVGTAIARSPLVSDLLGPVLEVCRPIPAIALVPVA 144

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +    +  +      + ++ +      A    ++E   +      R    +
Sbjct: 145 ILMFP----SNEQGIVFITFTAAFFPVMVSTRHAVRALAPVWEEAVLTMGGGRGRVLVSV 200

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  + G     G +W   I +E+ S         G+G    +      +P V +
Sbjct: 201 VLPGALPGILGGLSVGIGVSWICVISAEMISG------AYGVGYRTWQDYTIVDYPGVFV 254

Query: 558 GVLIMCCFVLALN---RFLWHPLYLYGTR 583
           G+  +       +         L  +  R
Sbjct: 255 GMTTIGVLGWLTSTAVELAGRRLTRWLPR 283



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L     +     D++      L   +  Q  + +  R+L+   ++ +      T  A+S 
Sbjct: 60  LWLRFAQFPSATDVIREFADRLGTGAYWQDLTDSLTRILTGFALAAVLGVAVGTAIARSP 119

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +  +L P+L++ + IP +  +   ++ F           E   +F  FT+  + +  S 
Sbjct: 120 LVSDLLGPVLEVCRPIPAIALVPVAILMF--------PSNEQGIVFITFTAAFFPVMVST 171

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +    EE   +      +    + +P ++PG++  + + +   W  V+++EMI 
Sbjct: 172 RHAVRALAPVWEEAVLTMGGGRGRVLVSVVLPGALPGILGGLSVGIGVSWICVISAEMIS 231

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
                    G+G          D   +   M T+  + +L      L  R +  W  +
Sbjct: 232 G------AYGVGYRTWQDYTIVDYPGVFVGMTTIGVLGWLTSTAVELAGRRLTRWLPR 283


>gi|110680132|ref|YP_683139.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109456248|gb|ABG32453.1| glycine betaine transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 344

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 90/234 (38%), Gaps = 15/234 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F++V  ++ +  +  +   V   +         +  L   A  T   +     +S+   
Sbjct: 110 WFIIVPLLVALTWYVARSIGVTLFVAVSFLFLGFIDHLDV-ALETLSIIFVCTGLSVALG 168

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  ++S  L  ++VPILD++Q++P   +L   +  F                 AI 
Sbjct: 169 VPIGIAMSRSNTLQRMIVPILDLLQTLPTFVYLIPLIFLFSVTESKLYG-------IAII 221

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +       +  +  D+ E + +F ++  QK W + +P ++P ++  +  ++   
Sbjct: 222 LYAIVPVIRLTDLGIRLVDPDVIEAADAFGMTKRQKLWGVQLPLALPNIMAGVNQTIMMS 281

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              VV + ++         PG+G  +   I+  +L   + A   ++ +  + D+
Sbjct: 282 LAMVVIASLVS-------APGLGVLVLRGIRNLELGVGIVAGFGIVLLAVILDR 328



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 75/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I    V     +  +     ++   F +   +  + +   T+  + V   ++  
Sbjct: 107 TTPWFIIVPLLVALTWYVARSIGVTLFVAVSFLFLGFIDHLDVALETLSIIFVCTGLSVA 166

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +     +   I P   LL   P  V+    +  +  + +  +    + +I  
Sbjct: 167 LGVPIGIAMSRSNTLQRMIVPILDLLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILY 223

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F +T  +    + LP   P  + G       +  
Sbjct: 224 AIVPVIRLTDLGIRLVDPDVIEAADAFGMTKRQKLWGVQLPLALPNIMAGVNQTIMMSLA 283

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++    +    + L+R
Sbjct: 284 MVVIASLVS-------APGLGVLVLRGIRNLELGVGIVAGFGIVLLAVILDR 328


>gi|227823271|ref|YP_002827243.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Sinorhizobium fredii NGR234]
 gi|227342272|gb|ACP26490.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Sinorhizobium fredii NGR234]
          Length = 285

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 100/238 (42%), Gaps = 16/238 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  +++++  + +     +  T+   +  ++     V  L     +T   ML A ++S+
Sbjct: 49  GLPWWLVILAFMALAWQSSKRWTLTLAVGVLLLAVG-VLGLWDLTMQTLALMLMATIVSV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L AKSR +  V +P+LD+MQ++P   +L   ++ F           ++ AI 
Sbjct: 108 VIGVPIGILVAKSRVVRNVTLPVLDVMQTMPSFVYLIPALMLFGLG--------KVPAIL 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     V  +       +  +  ++ E + +F  S  Q  + + +P + P ++  +  ++
Sbjct: 160 ATIIYAVPPLIRLTDLGIRQVDGEVVEAATAFGGSPTQILFGVELPLATPTIMAGLNQTI 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+G  +   I+  D+   L A + ++ +  + D++
Sbjct: 220 MMALSMVVVASMI-------GARGLGEQVLNGIQTLDVGKGLEAGIGIVILAIVLDRI 270



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 90/273 (32%), Gaps = 15/273 (5%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--- 360
           +  +P++  ++ L    G +        L+             +W  ++  +A+      
Sbjct: 9   SIRAPVNEFIQALVTNYGWVFKAISGVILKAVLFIEWILRGLPWWLVILAFMALAWQSSK 68

Query: 361 -WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W     +        VL +  L   T+  +++  I++ +I +P+GI +     + +   
Sbjct: 69  RWTLTLAVGVLLLAVGVLGLWDLTMQTLALMLMATIVSVVIGVPIGILVAKSRVVRNVTL 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   P+ V+    +           +   L  I      ++     G      + 
Sbjct: 129 PVLDVMQTMPSFVYLIPALMLFGLG----KVPAILATIIYAVPPLIRLTDLGIRQVDGEV 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A++F  +  +    + LP   P  + G       A +  +V+ +           GL
Sbjct: 185 VEAATAFGGSPTQILFGVELPLATPTIMAGLNQTIMMALSMVVVASMIG-------ARGL 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +    +     + +   + +    + L+R 
Sbjct: 238 GEQVLNGIQTLDVGKGLEAGIGIVILAIVLDRI 270


>gi|332798788|ref|YP_004460287.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696523|gb|AEE90980.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 284

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++   I+  R+++  I  ++  + +G+ +G  P + + + P   +    P     PL
Sbjct: 83  GELLYHTLISARRILLGFIAGAVPGVVLGLSMGLFPPVRASLMPMVAVTFPIPKLAIMPL 142

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +        +  G  + +L N +AG       + ++A +F  + ++++  
Sbjct: 143 ILIIFGLGETSK----IFTIAIGVFYLVLINTMAGVLNIDEIYLDIAKNFGASPFQFYTT 198

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  PG  P    G     G A    + +E+           G+G  +  + +     ++ 
Sbjct: 199 VAFPGALPMIFAGFKLGMGTALLLIVAAEL------SAAKAGVGWMVWRAYDMFDIEKMF 252

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++ M       +  L
Sbjct: 253 VALITMAFLGYIFSCLL 269



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I   +   L    L  +   +  R+L   +   +   V          +   L+P
Sbjct: 67  SSPVMIFKTMIPMLYSGELLYHTLISARRILLGFIAGAVPGVVLGLSMGLFPPVRASLMP 126

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +   IP L  +   ++ F           E + IF I     + +  +    + NI 
Sbjct: 127 MVAVTFPIPKLAIMPLILIIFGLG--------ETSKIFTIAIGVFYLVLINTMAGVLNID 178

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +++++F  S +Q +  +  P ++P +     + M      +VA+E+          
Sbjct: 179 EIYLDIAKNFGASPFQFYTTVAFPGALPMIFAGFKLGMGTALLLIVAAEL------SAAK 232

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFR 271
            G+G  +  A    D+  +  A++TM  + +++  LL    + +I W+N  R
Sbjct: 233 AGVGWMVWRAYDMFDIEKMFVALITMAFLGYIFSCLLDIAEKIVIPWANNRR 284


>gi|330961885|gb|EGH62145.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 265

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R  +   I   I + +G   G        +    Q++   P     PLV+     
Sbjct: 64  AISGWRAGIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  
Sbjct: 124 ----DETAKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAM 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S       ++G+G     + E      VVL +++  
Sbjct: 180 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYA 233

Query: 564 CFVLALN 570
                 +
Sbjct: 234 VLGKLAD 240



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 92/233 (39%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++     +    +  + + +  R      I          +   S+    +L 
Sbjct: 40  LPAPSAVIEAGVNLVASGEIWTHLAISGWRAGIGFAIGGGIGLALGFITGLSKWGERLLD 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + Y  + NI
Sbjct: 100 SSVQMIRNVPHLALIPLVILWFGID--------ETAKIFLVALGTLFPIYLNTYHGIRNI 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+SRS+ LSG+  F ++ +P +MP ++  +  ++   W  ++ +E I        
Sbjct: 152 DPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWLTLIVAETISASS---- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             GIG     A +      ++ A++    +  L D   + L R  + W   ++
Sbjct: 208 --GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQ 258


>gi|328949595|ref|YP_004366930.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328449919|gb|AEB10820.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 287

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 16/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  + +V+ +  +  H  +   +   +   +   +    L   A +T   M+ A  IS+L
Sbjct: 51  LPWWSVVLVVALLAWHASRRWVLAVGLAATM-FLIGALGLWDLAIQTLALMIVATTISVL 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L ++S RL   L+P+LD MQ++P   +L   ++ F           ++ A+FA
Sbjct: 110 IGVPTGILMSRSDRLRAFLLPLLDAMQTMPSFVYLIPALMLFGLG--------KVPAVFA 161

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                V          +  + +++ E S +F  +  QK   + +P ++P ++  +  +  
Sbjct: 162 TVIYAVPPAIRLTDLGIRLVDKEVLEASEAFGATARQKLLGVQLPLALPNIMAGINQTTM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI          G+G  + L I+  D+     A + ++ +  + D++
Sbjct: 222 MALSMVVIASMI-------GARGLGEQVLLGIQRLDVGQGTEAGVAIVALAIVMDRI 271



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 75/237 (31%), Gaps = 16/237 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
            ++  + W+ VV  VA+        W     +         L +  L   T+  ++V   
Sbjct: 46  RFLGTLPWWSVVLVVALLAWHASRRWVLAVGLAATMFLIGALGLWDLAIQTLALMIVATT 105

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ +I +P GI +     + + + P    +   P+ V+    +           +     
Sbjct: 106 ISVLIGVPTGILMSRSDRLRAFLLPLLDAMQTMPSFVYLIPALMLFGLG----KVPAVFA 161

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +       +     G      +  E + +F  T  +    + LP   P  + G      
Sbjct: 162 TVIYAVPPAIRLTDLGIRLVDKEVLEASEAFGATARQKLLGVQLPLALPNIMAGINQTTM 221

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ +           GLG  +    ++    +     + +    + ++R 
Sbjct: 222 MALSMVVIASMIG-------ARGLGEQVLLGIQRLDVGQGTEAGVAIVALAIVMDRI 271


>gi|78062911|ref|YP_372819.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77970796|gb|ABB12175.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 280

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + D +        L ++   +  R+L       L  F        SR L   ++
Sbjct: 60  LPPPERVFDALGDLATSGDLVRHTLISLQRVLVGFAAGTLLGFATGVALGLSRTLEAYVL 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K +         I  + +  +T S  Q     
Sbjct: 120 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------LIAHAALVPVTLSTLQGFRQT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 172 PPALDEVARVFGYTRRQRIVHVVLPAAIPTLATGVRLAFTKSWLALVVVELVASSE---- 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ A++ +  V  L ++LL
Sbjct: 228 --GLGYLIVYGRQLFQLDLVMAAVIVVGAVGLLINRLL 263



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 88/246 (35%), Gaps = 17/246 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------YVIWLGCITM 387
             + R++  L      V+  V     W +   +       D L        ++    I++
Sbjct: 28  RWSWRLAPWLLPALLFVLWSVGSARGWIAPQILPPPERVFDALGDLATSGDLVRHTLISL 87

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            RV+V     +++    G+ +G    + + + P    L   P   + P ++  V      
Sbjct: 88  QRVLVGFAAGTLLGFATGVALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLLVGVG--- 144

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 LL+       +  + + G    P    EVA  F  T  +   +++LP   P   
Sbjct: 145 -EPLKYLLIAHAALVPVTLSTLQGFRQTPPALDEVARVFGYTRRQRIVHVVLPAAIPTLA 203

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   A   +W A +V E+ +       + GLG  I    +      V+  V+++    L
Sbjct: 204 TGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAVIVVGAVGL 257

Query: 568 ALNRFL 573
            +NR L
Sbjct: 258 LINRLL 263


>gi|50083329|ref|YP_044839.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49529305|emb|CAG67017.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 266

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 102/264 (38%), Gaps = 17/264 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + +R+ P +  ++   +        L   +    P  +V      L    L  +   +  
Sbjct: 16  LGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHLLVSGELWHHVKVSAG 75

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  +++      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 76  RALLGLLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGID---- 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + M  + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP
Sbjct: 132 ----ESAKLFLVAVGVFFPMYINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMP 187

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S+   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 188 SILVGLRFSLGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 241

Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271
           +  L D   Q L R ++ W   ++
Sbjct: 242 LGKLADVLAQALERYLLRWHAGYQ 265



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + +  N 
Sbjct: 96  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI----DESAKLFLVAVGVFFPMYINT 151

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S
Sbjct: 152 YHGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS 211

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    G+G     + E      V++G+L+        +  
Sbjct: 212 ------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 249


>gi|297156427|gb|ADI06139.1| transport system integral membrane protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 317

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 94/247 (38%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVV 392
           +  ++ +    ++  V +         + +     D L+ +WL          ++ R + 
Sbjct: 64  LPPVVAVALILLIWKVLVWAKVTDDYKLPDPKLVWDALHQLWLKGELLDIIWTSVSRGLF 123

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +IA  I  P+G+ +     I + I P    L + P+  + P  V  +       +  +
Sbjct: 124 GFLIALAIATPLGLIVARVKFIRAGIGPILSGLQSLPSVAWVPPAVIWLGL----NDKMM 179

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             +++ G    I   +++G    P  F     +    G    R+I+LP   P YV G   
Sbjct: 180 YTVILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGARGLVSARHILLPAALPGYVAGLKQ 239

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               +W + + +E+ +         GLG Y+           V+LG++++    +A+   
Sbjct: 240 GWAFSWRSLMAAEIIA--KSPDLGLGLGQYLENQRNNSDMAGVLLGIIMILFVGIAIELL 297

Query: 573 LWHPLYL 579
           ++ P+  
Sbjct: 298 IFAPIER 304



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 97/254 (38%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P +  +   +L+  ++    +    +   P+ + D +        L      +  R
Sbjct: 61  QKVLPPVVAVALILLIWKVLVWAKVTDDYKLPDPKLVWDALHQLWLKGELLDIIWTSVSR 120

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +I+L        + A+ + +   + PIL  +QS+P + ++   V++         
Sbjct: 121 GLFGFLIALAIATPLGLIVARVKFIRAGIGPILSGLQSLPSVAWVPPAVIWLGLNDKMMY 180

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+    G     ++ +P ++PG
Sbjct: 181 T--------VILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGARGLVSARHILLPAALPG 232

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I     +    G+G Y+       D+  +L  ++ +L V
Sbjct: 233 YVAGLKQGWAFSWRSLMAAEIIAKSPDLGL--GLGQYLENQRNNSDMAGVLLGIIMILFV 290

Query: 252 IFLYDQLLFRPMIV 265
               + L+F P+  
Sbjct: 291 GIAIELLIFAPIER 304


>gi|254438377|ref|ZP_05051871.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198253823|gb|EDY78137.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 345

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 84/195 (43%), Gaps = 14/195 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y  +T   +    +  ++F        ++S R+  +++PILD++Q++P   +L   +  F
Sbjct: 151 YTMQTLAIIFVCALSCVVFGVPIGIAMSRSDRVQRIMIPILDMLQTLPPFVYLIPLIFLF 210

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P            AI    +  +       +  + +D+ E + +F +S  QK + +
Sbjct: 211 SVTEPKLYG-------IAIILYAIVPVVRLTDLGIRLVDKDVIEAADAFGMSKRQKLFNV 263

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L 
Sbjct: 264 QIPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLRGIRSLELGVGLL 316

Query: 244 AMLTMLGVIFLYDQL 258
           + L ++ +  + D++
Sbjct: 317 SGLGIVLLAIILDRV 331



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                 +    ++   A+    + +  +   F +   +        T+  + V  +   +
Sbjct: 109 TVPWFIMIPLLMLISWAVSRQMKLVALVAICFGFLGFVDYYIYTMQTLAIIFVCALSCVV 168

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +P+GI +     +   + P   +L   P  V+    +  +  + +       + +I  
Sbjct: 169 FGVPIGIAMSRSDRVQRIMIPILDMLQTLPPFVYL---IPLIFLFSVTEPKLYGIAIILY 225

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F ++  +    + +P   P  + G       +  
Sbjct: 226 AIVPVVRLTDLGIRLVDKDVIEAADAFGMSKRQKLFNVQIPLALPNIMAGVNQTIMMSLA 285

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            +L  L +    + L+R
Sbjct: 286 MVVIASLVS-------APGLGVLVLRGIRSLELGVGLLSGLGIVLLAIILDR 330


>gi|269120128|ref|YP_003308305.1| substrate-binding region of ABC-type glycine betaine transporter
           [Sebaldella termitidis ATCC 33386]
 gi|268614006|gb|ACZ08374.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Sebaldella termitidis ATCC 33386]
          Length = 526

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 15/208 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   +   A         A+++++L       L    + L   ++ +++++Q++P L
Sbjct: 7   VSENYQYILSLAFAHIKLTFIAVLLAILIGVPLGILINTYKSLSKGIIGVINLIQAVPSL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +               L AI  +    +  +  + Y  L  I     E S+   
Sbjct: 67  ALLGLFIPLLGIGV--------LPAIAVVILYSLLPIVKNTYTGLNAINPQTLEASKGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+ + + +P ++P ++  + +S       V A  ++ V    I   G+GS I   I
Sbjct: 119 MTRLQRLFKVKMPLALPIIMAGIRIS------SVTAVGLMTVAAF-IGAGGLGSLIFAGI 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +  +   IL   +    +    D  + +
Sbjct: 172 QTVNYNKILAGAIPACILALAIDFFVGK 199



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y++ L    +    + +++A +I +P+GI I     +S  I     L+ A P+     L 
Sbjct: 13  YILSLAFAHIKLTFIAVLLAILIGVPLGILINTYKSLSKGIIGVINLIQAVPSLALLGLF 72

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        L    ++I  +   I+ N   G +A      E +    +T  +    +
Sbjct: 73  IPLLGIG----VLPAIAVVILYSLLPIVKNTYTGLNAINPQTLEASKGIGMTRLQRLFKV 128

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   +   A     V+     G       GLG+ I    +  ++ +++ 
Sbjct: 129 KMPLALPIIMAGIRISSVTAVGLMTVAAFIGAG-------GLGSLIFAGIQTVNYNKILA 181

Query: 558 GVLIMCCFVLALNRFL 573
           G +  C   LA++ F+
Sbjct: 182 GAIPACILALAIDFFV 197


>gi|311895396|dbj|BAJ27804.1| putative aliphatic sulfonate ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 301

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 85/207 (41%), Gaps = 6/207 (2%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +  +   +++R +    ++ +I  P+G+ +     + + + P    L + P+  
Sbjct: 88  LWYAGTLFSIIWTSVWRGLSGFGLSVLIGTPIGLVVAQLKPVRAALGPVLSGLQSLPSVA 147

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P  +  +       N  +  +++ G    I   +I+G    P  +     +   TG R
Sbjct: 148 WVPAAIIWLGIT----NSAMYAVILLGAVPSIANGLISGIDQVPPIYLRAGQTLGATGLR 203

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R+I+LP   P Y++G       +W + + +E+ +         GLG ++    E  + 
Sbjct: 204 GARHILLPAALPGYLSGLKQGWAFSWRSLMAAELIASSPDLGL--GLGRFLENQREFSNM 261

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYL 579
             V LG+L++    +A++   + PL  
Sbjct: 262 SGVFLGILLILIVGVAIDLLFFSPLER 288



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P D+ D +       +L      +  R LS   +S+L       + A+ + +   L
Sbjct: 74  KLPSPADVWDSLTELWYAGTLFSIIWTSVWRGLSGFGLSVLIGTPIGLVVAQLKPVRAAL 133

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P+L  +QS+P + ++   +++                   I    V ++   +   +  
Sbjct: 134 GPVLSGLQSLPSVAWVPAAIIWLGITNSAMYA--------VILLGAVPSIANGLISGIDQ 185

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       ++   +G +   ++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 186 VPPIYLRAGQTLGATGLRGARHILLPAALPGYLSGLKQGWAFSWRSLMAAELIASSPDLG 245

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
              G+G ++    +  ++  +   +L +L V    D L F P+  
Sbjct: 246 L--GLGRFLENQREFSNMSGVFLGILLILIVGVAIDLLFFSPLER 288


>gi|225165795|ref|ZP_03727580.1| binding-protein-dependent transport systems inner membrane
           component [Opitutaceae bacterium TAV2]
 gi|224799956|gb|EEG18400.1| binding-protein-dependent transport systems inner membrane
           component [Opitutaceae bacterium TAV2]
          Length = 238

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+   V+    + ++I +  G+  G    +     P    +   P   + PL+V  +   
Sbjct: 44  ISAITVLKGFSVGALIGLATGMATGLSRTVEDLFGPLLNGIRQVPTLAWLPLIVLWMGAG 103

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L      ++L+     + +  N + G    P ++ EV   F     R  R I+LP   P
Sbjct: 104 DLGK----TVLIAKAVFFPVFLNTLQGIRGTPREYIEVGRIFDYGRLRLLRRIVLPAALP 159

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G     G +W   IV+E+           GLG  I  + E     ++ + ++I+  
Sbjct: 160 GIFVGLRFGAGISWAVLIVAEMLG------ARRGLGFLIMRAQELLHSDQLFVLIVIIGV 213

Query: 565 FVLALNRFLWH 575
              A++  L  
Sbjct: 214 VGFAIDVGLRR 224



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 85/238 (35%), Gaps = 15/238 (6%)

Query: 25  FVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            ++V  ++       +     P  + +     L   +L      + + +L    +  L  
Sbjct: 1   LLIVWELLTRFGFVERIFLPTPASVGEAFYKLLVRDNLLGDFQISAITVLKGFSVGALIG 60

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                    SR +  +  P+L+ ++ +P L +L   V++      GK +    A  F +F
Sbjct: 61  LATGMATGLSRTVEDLFGPLLNGIRQVPTLAWLPLIVLWMGAGDLGKTVLIAKAVFFPVF 120

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                    +  Q +   PR+  EV R F     +    + +P ++PG+   +       
Sbjct: 121 --------LNTLQGIRGTPREYIEVGRIFDYGRLRLLRRIVLPAALPGIFVGLRFGAGIS 172

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  ++ +EM+          G+G  I  A +      +   ++ +  V F  D  L R
Sbjct: 173 WAVLIVAEMLG------ARRGLGFLIMRAQELLHSDQLFVLIVIIGVVGFAIDVGLRR 224


>gi|52549459|gb|AAU83308.1| ABC transporter permease protein [uncultured archaeon GZfos27E6]
          Length = 263

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 18/246 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----PQYASRTTLRMLSAMVIS 79
           A  L   II   +        P  +     I L    L    P     + L     +   
Sbjct: 18  AISLCGAIIIWEIVADFIIRNPIKLPSPYAIFLSYLKLWEIIPVDICTSLLHFGIGLGAG 77

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                V   L    R    V  P+++I++ IP L ++ F +++           +  AA 
Sbjct: 78  AAVGVVVGMLMGWFRAADRVFDPVVEILRPIPPLAWVPFAILWGGL--------SHYAAG 129

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY-LGVPFSMPGLVWNMMM 198
           F +F    + +  + Y     + +   + ++       +K    +  PFS+P +   + +
Sbjct: 130 FIVFIGAFFPILINTYTGFREVDKTYIDAAKVLGCKEERKLIKSVAFPFSLPYIATGIRI 189

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            M  GW  VVA+EM  V  +     G+G  +        ++  L A + +LG++ L+   
Sbjct: 190 GMGVGWMCVVAAEMFGVSKS-----GLGFRLFQVFWPLHMMDKLVAYMIILGLVALFLDR 244

Query: 259 LFRPMI 264
           LFR  +
Sbjct: 245 LFRYFV 250



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 14/205 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           C ++    + +   + + + VG+ +G+         P  ++L   P   + P  +     
Sbjct: 64  CTSLLHFGIGLGAGAAVGVVVGMLMGWFRAADRVFDPVVEILRPIPPLAWVPFAILWGGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGI 502
            H         ++  G  + IL N   G       + + A         +  + +  P  
Sbjct: 124 SH----YAAGFIVFIGAFFPILINTYTGFREVDKTYIDAAKVLGCKEERKLIKSVAFPFS 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE-STEKGSFPEVVLGVLI 561
            PY  TG     G  W   + +E+       +  +GLG  + +         ++V  ++I
Sbjct: 180 LPYIATGIRIGMGVGWMCVVAAEMFG-----VSKSGLGFRLFQVFWPLHMMDKLVAYMII 234

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLR 586
           +    L L+R      Y    R  +
Sbjct: 235 LGLVALFLDRLFR---YFVEERLFK 256


>gi|126739081|ref|ZP_01754775.1| Glycine betaine/L-proline transport system permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126719698|gb|EBA16406.1| Glycine betaine/L-proline transport system permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 516

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + +LL  +                +      + A  T   + +A  +S++     
Sbjct: 294 IVIASLIVLLTWLTAGIRAAIYSGAFLAYMGFLGFWEGAMTTLALLGTAACLSIVIGIPL 353

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+      V+ PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 354 GMFAARRPTFYAVIQPIMDFMQTMPAFVFMVPVIAFFGVGKP--------AAVIVTMIFG 405

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 406 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLAM 465

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 466 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 511



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 11/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    +V    +    ++  Y      Y   L        T+  +     ++ +I IP
Sbjct: 293 WIVIASLIVLLTWLTAGIRAAIYSGAFLAYMGFLGFWEGAMTTLALLGTAACLSIVIGIP 352

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G++   RP   + IQP    +   PA VF    V  ++++ +     + + MIFG    
Sbjct: 353 LGMFAARRPTFYAVIQPIMDFMQTMPAFVFM---VPVIAFFGVGKPAAVIVTMIFGGT-P 408

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   + G    P   +E A SF    W     + LP   P    G       +    +V
Sbjct: 409 VVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLASPSIRAGINQTIMLSLAMVVV 468

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 469 ASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 511


>gi|300698177|ref|YP_003748838.1| ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299074901|emb|CBJ54470.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 298

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 95/288 (32%), Gaps = 16/288 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +S         +   R    E  L L         L      VV  +      + +  
Sbjct: 12  ADISARAPVYRTPVDFERIGVVEKPLSLAERLVGHAWLRKLAILVVLALVWEGGARWLDN 71

Query: 367 IVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISS 416
            +   T+ D    +W G    T+F  +   +   +    +G+ +                
Sbjct: 72  PLLLPTFSDTAQALWAGLAGGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGNRLGQD 131

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    P+ +        +    L  +++    W +  N  AG  +  
Sbjct: 132 FLETLTAMFNPLPAIALLPIALVWFGLGSGS----LVFVIVHSVVWAVSLNTHAGFQSVS 187

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +    
Sbjct: 188 NTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            GLG YI E+      PEV  G+L +    L +   ++  L     + 
Sbjct: 246 GGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVKR 293



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   LV       L          D    +   L   +L      +   +L+   + L 
Sbjct: 55  LVVLALVWEGGARWLDNPLLLPTFSDTAQALWAGLAGGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   +R     L  +  +   +P +  L   +V+F             + +F 
Sbjct: 115 LSCALVVLGIGNRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGSG--------SLVFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFQSVSNTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++    +     G+G YI        +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVFGVSS--GQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292


>gi|297201877|ref|ZP_06919274.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sviceus ATCC 29083]
 gi|197712750|gb|EDY56784.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sviceus ATCC 29083]
          Length = 645

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 67/444 (15%), Positives = 142/444 (31%), Gaps = 32/444 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  SRR+  +L P+LD MQ +P   +L   V+ F 
Sbjct: 143 TMQTLALMVVAVLASVVVGVLLGLAAGLSRRMDKILRPVLDTMQVMPAYAYLLPVVLVFG 202

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L    +++ E   S   +  Q+     
Sbjct: 203 MGVP--------AAVLATVVYAAPPMARLTALGLQGADKEVLEAVESLGTTARQRLLTAR 254

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I          G+G  +  A+   D+ A L A
Sbjct: 255 IPLARKELLLGLNQTIMMALSMAVIASVIGAA-------GLGDRVYQALASVDVGAALAA 307

Query: 245 MLTMLGVIFLYDQLL--------FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
            + ++ +  + D++          +    W+  + L  T  +  A   +  L     +  
Sbjct: 308 GIPIVLLAVVLDRVTGAAGDGTEGQGRAGWA--YALAGTVVVAVAARLLGRLDWPDAWTL 365

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            I          ++N++      +G            +    R       +W  ++    
Sbjct: 366 NIAEPVNRAVDWMTNHLYSGVPVIGGTADWAGHFTTWVLDPVRNGLQGLPWWSVLLIVAT 425

Query: 357 IGIA---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +      W++    V       VL V      T+ +V+  + +  ++     +       
Sbjct: 426 LAWLIGTWRTALTAVLAMAAIGVLGVWTPALDTLSQVLAAVAVTLVLGFATAVAAARSDR 485

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   ++P   +    P  V+   VV+              +  +             G  
Sbjct: 486 VERMLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAVVRI----TTQGLR 541

Query: 474 AFPNDFKEVASSFHITGWRWWRYI 497
                  E + S   T W+  R +
Sbjct: 542 QVDPAAMESSRSLGATSWQQLRQV 565


>gi|52080989|ref|YP_079780.1| glycine betaine ABC transporter permease [Bacillus licheniformis
           ATCC 14580]
 gi|52786365|ref|YP_092194.1| OpuAB [Bacillus licheniformis ATCC 14580]
 gi|319645053|ref|ZP_07999286.1| OpuAB protein [Bacillus sp. BT1B_CT2]
 gi|52004200|gb|AAU24142.1| glycine betaine ABC transporter (permease) [Bacillus licheniformis
           ATCC 14580]
 gi|52348867|gb|AAU41501.1| OpuAB [Bacillus licheniformis ATCC 14580]
 gi|317392862|gb|EFV73656.1| OpuAB protein [Bacillus sp. BT1B_CT2]
          Length = 284

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 87/203 (42%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D         +T   ++++++IS++         ++ + +  V+ PILD+MQ++P   +
Sbjct: 84  IDYLGYWDAMLQTLALVVTSVLISVIIGIPVGIWGSQKKTVRRVVTPILDLMQTMPAFVY 143

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +F     G V G   + IFA+               +  +P DL E + +F  +
Sbjct: 144 LLPAIFFF---NIGVVPGVVASVIFAMP-----PTIRMTILGIQQVPEDLIEATEAFGST 195

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+ + + +P +   ++  +  S+      VV + M+         PG+G  +  A+ +
Sbjct: 196 TSQRLFKVQLPLATKTILAGINQSIMLALSMVVIASMV-------GAPGLGEEVYRAVTQ 248

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
                 +   L ++ +  + D++
Sbjct: 249 LQTGTGVETGLAIVIIAIVLDRV 271



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 16/234 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L      ++  +   + W      +  FT      + +LG       T+  VV  ++I+
Sbjct: 48  GLGFVPPVMLTVIFAALVWLISKRGIALFTLIGFFIIDYLGYWDAMLQTLALVVTSVLIS 107

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II IPVGIW   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 108 VIIGIPVGIWGSQKKTVRRVVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 165

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +   I G    P D  E   +F  T  +    + LP      + G   +   A
Sbjct: 166 --AMPPTIRMTILGIQQVPEDLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLA 223

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +  +++ +           GLG  +  +  +      V   L +    + L+R
Sbjct: 224 LSMVVIASMVG-------APGLGEEVYRAVTQLQTGTGVETGLAIVIIAIVLDR 270


>gi|222081387|ref|YP_002540750.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726066|gb|ACM29155.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 237

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 15/238 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFT 83
            +++  + +      Q+   P D V      L V   L  +   +  R++    I     
Sbjct: 1   MLVLWWVASARGWLPQQILPPPDYVYQAARDLIVSGELLYHTGVSLRRVIIGFAIGASAG 60

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            V       S R+   + P+      IP LG++   +++            E   I  I 
Sbjct: 61  LVLGISMGLSERVEDYVKPLFLAFAQIPTLGWIPLLMLFVGID--------ETLKIIIIA 112

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  MT +    +  +     EV R+ R S WQ    + +P ++P +   +   ++  
Sbjct: 113 KGAIVPMTLNTLTGIRGVSPRYLEVGRALRFSRWQTLRLIVLPGAVPSIFTGIRYGLTHS 172

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           W  +V  E++   +      G+G  +    +   L  ++ AM+ +  V F+ D+ L R
Sbjct: 173 WTSLVGVELLASSE------GLGYLLVWGRQMFWLDTVIVAMIAIGLVGFIMDKSLDR 224



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++   +++ RV++   I +   + +GI +G    +   ++P     A  P   + PL
Sbjct: 36  GELLYHTGVSLRRVIIGFAIGASAGLVLGISMGLSERVEDYVKPLFLAFAQIPTLGWIPL 95

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V            +++  G    +  N + G       + EV  +   + W+  R 
Sbjct: 96  LMLFVGI----DETLKIIIIAKGAIVPMTLNTLTGIRGVSPRYLEVGRALRFSRWQTLRL 151

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LPG  P   TG       +W + +  E+ +       + GLG  +    +      V+
Sbjct: 152 IVLPGAVPSIFTGIRYGLTHSWTSLVGVELLA------SSEGLGYLLVWGRQMFWLDTVI 205

Query: 557 LGVLIMCCFVLALNR 571
           + ++ +      +++
Sbjct: 206 VAMIAIGLVGFIMDK 220


>gi|186685926|ref|YP_001869122.1| binding-protein-dependent transporters inner membrane component
           [Nostoc punctiforme PCC 73102]
 gi|186468378|gb|ACC84179.1| binding-protein-dependent transport systems inner membrane
           component [Nostoc punctiforme PCC 73102]
          Length = 275

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 64/206 (31%), Gaps = 10/206 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G I           +     I+  R +   I+   I   +G+  GF       +    Q+
Sbjct: 60  GVIATAIRLASTGELFQHIEISAGRAISGFIVGGSIGFGLGLLNGFSRIAEKLLDSSLQM 119

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+          +     L+  G  + +  N   G         E+  
Sbjct: 120 LRTIPNLALIPLVILWFGIG----DQARLFLVSMGVFFPLYLNTFHGIRNVDPGLIEMGK 175

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + +   +    II PG     + G   + G  W   IV+E  +        +GLG    
Sbjct: 176 VYGLKTPQLLWQIIFPGALSSILVGVRFSLGIMWLTLIVAETIA------ADSGLGYMAM 229

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + E      VVL ++I        +
Sbjct: 230 NAREFMQTDVVVLSIVIYALLGKLAD 255



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 96/261 (36%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +I P I  +L  VL        L   +    P  ++           L Q+   +  R +
Sbjct: 27  KIVPWIVPVLILVLWEFASRTGLLSTRILPAPSGVIATAIRLASTGELFQHIEISAGRAI 86

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  ++     F    L   SR    +L   L ++++IP L  +   +++F          
Sbjct: 87  SGFIVGGSIGFGLGLLNGFSRIAEKLLDSSLQMLRTIPNLALIPLVILWFGIG------- 139

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            + A +F +     + +  + +  + N+   L E+ + + L   Q  W +  P ++  ++
Sbjct: 140 -DQARLFLVSMGVFFPLYLNTFHGIRNVDPGLIEMGKVYGLKTPQLLWQIIFPGALSSIL 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+   W  ++ +E I          G+G     A +      ++ +++    +  
Sbjct: 199 VGVRFSLGIMWLTLIVAETIAADS------GLGYMAMNAREFMQTDVVVLSIVIYALLGK 252

Query: 254 LYD---QLLFRPMIVWSNKFR 271
           L D   + L    + W+  ++
Sbjct: 253 LADAVARGLETKFLAWNPNYQ 273


>gi|257455631|ref|ZP_05620860.1| putative aliphatic sulfonates transport permease protein SsuC
           [Enhydrobacter aerosaccus SK60]
 gi|257446914|gb|EEV21928.1| putative aliphatic sulfonates transport permease protein SsuC
           [Enhydrobacter aerosaccus SK60]
          Length = 298

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 10/159 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P   + +    Q+L   P     PLV+                L+  GT + I  N   G
Sbjct: 128 PVFRTLLDTTFQMLRNIPHLALIPLVIVWFGI----DEAAKVFLVAVGTFFPIYLNTYHG 183

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                    E+A S+ +TGW  ++ +ILPG  P  + G   + G  W   IV+E  S   
Sbjct: 184 VRNVDKHLVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSLGIMWLTLIVAETIS--- 240

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               TTG+G     + E      ++  +L+        +
Sbjct: 241 ---ATTGIGYLAMHAREFFQIDIIMFSILVYALLGFLAD 276



 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 105/253 (41%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  + LV     +    ++  + P  ++      +    L Q+   + LR  + ++I  L
Sbjct: 56  LAGWQLVASFQLLPEAYLKNISSPSAVLQAGYELIKSGELWQHLGISALRAFAGLLIGGL 115

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F   +  L +       +L     ++++IP L  +   +V+F           E A +F 
Sbjct: 116 FGLGFGLLTSTLPVFRTLLDTTFQMLRNIPHLALIPLVIVWFGID--------EAAKVFL 167

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + N+ + L E+++S+ L+GW  F  + +P ++P ++  +  S+ 
Sbjct: 168 VAVGTFFPIYLNTYHGVRNVDKHLVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSLG 227

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +   +  I++++L    + FL D +   
Sbjct: 228 IMWLTLIVAETISATT------GIGYLAMHAREFFQIDIIMFSILVYALLGFLADFIAKK 281

Query: 259 LFRPMIVWSNKFR 271
           L    + W   ++
Sbjct: 282 LEFVWLKWHPAYQ 294


>gi|288959859|ref|YP_003450199.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288912167|dbj|BAI73655.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 291

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R      I   I   +G  +GF     + +    Q++ A P     PL
Sbjct: 87  GTLLRDLGTSLLRAAAGFAIGGGIGFALGTLVGFSRLAEALVDRSVQMIRAIPFLALLPL 146

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + +  N   G         E+     ++     R 
Sbjct: 147 VIVWFGVGEGQK----IFLVSLGVAFPVYINTTLGIRQVDPKLLELGRVRGLSTALLIRR 202

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LPG  P  +TG   A   AW A +V+E            GLG    ++ E      +V
Sbjct: 203 IVLPGALPSILTGVRYALATAWLALVVAETIG------AQAGLGFLAMDAREFLRTDVIV 256

Query: 557 LGVLIMCCFVLALN 570
           L ++I     +  +
Sbjct: 257 LTIVIYALIGVLAD 270



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V          +L +    + LR  +   I     F   TL   SR    ++ 
Sbjct: 70  LPAPSKVVATASKLALHGTLLRDLGTSLLRAAAGFAIGGGIGFALGTLVGFSRLAEALVD 129

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  L   +V+F      K        IF +     + +  +    +  +
Sbjct: 130 RSVQMIRAIPFLALLPLVIVWFGVGEGQK--------IFLVSLGVAFPVYINTTLGIRQV 181

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R   LS       + +P ++P ++  +  +++  W  +V +E I        
Sbjct: 182 DPKLLELGRVRGLSTALLIRRIVLPGALPSILTGVRYALATAWLALVVAETIG------A 235

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             G+G     A +      I+  ++    +  L D
Sbjct: 236 QAGLGFLAMDAREFLRTDVIVLTIVIYALIGVLAD 270


>gi|269955231|ref|YP_003325020.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
 gi|269303912|gb|ACZ29462.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
          Length = 297

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 87/227 (38%), Gaps = 16/227 (7%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W   +   A G  W +   +V+    QD L       +++ R +  + I  ++ + + +
Sbjct: 70  AWVSPILLPAPGTVWAAAVDLVSSGKLQDNL------GVSLGRAMTGLGIGLVVGVTLAL 123

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
             G        +    Q++ + P     PLV+               LL+     + +  
Sbjct: 124 LTGLSKVAELLVDSNVQMVRSMPILALQPLVIVWFGIG----EPTKILLVALAVTFPVYI 179

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  A   A    F E+A++  +      R+++LPG  P ++TG   A   +W   +V+E 
Sbjct: 180 NTHAAIRAVDARFVELATTRGLGRLALVRHVVLPGALPGFLTGLRFATSISWLVLVVAEQ 239

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +       T G+G  + ++        +++G+++     L  +  +
Sbjct: 240 IN------ATAGIGYLMTQARTVARTDVIIVGLVVYALLGLLSDTIV 280



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L                 P  +       +    L      +  R ++ + I L+
Sbjct: 57  LFVLALWWVASAQAWVSPILLPAPGTVWAAAVDLVSSGKLQDNLGVSLGRAMTGLGIGLV 116

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L   S+   +++   + +++S+PIL      +V+F    P K++   LA  F 
Sbjct: 117 VGVTLALLTGLSKVAELLVDSNVQMVRSMPILALQPLVIVWFGIGEPTKILLVALAVTFP 176

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         + + ++  +     E++ +  L       ++ +P ++PG +  +  + S
Sbjct: 177 VY--------INTHAAIRAVDARFVELATTRGLGRLALVRHVVLPGALPGFLTGLRFATS 228

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E I          GIG  +  A        I+  ++    +  L D   +L
Sbjct: 229 ISWLVLVVAEQI------NATAGIGYLMTQARTVARTDVIIVGLVVYALLGLLSDTIVRL 282

Query: 259 LFRPMIVWS 267
           + R  + WS
Sbjct: 283 VQRKALSWS 291


>gi|73539621|ref|YP_299988.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72122958|gb|AAZ65144.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 290

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 10/256 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                    +R   P  + QL     +  +      C    V  G        +      
Sbjct: 19  AHQPPPWRRLRALMPGRYAQLSIASPLLLLAIWEGACRAGWVNTGFFPPPSAVLEELTHL 78

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     I++ R++   ++ ++  + +G+ +G  P + + +QP        P    
Sbjct: 79  IATGEIFVHVGISLTRILAGFLLGAVPGVLIGLAMGLSPVVRALVQPLVNATFPIPKVAI 138

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +       L+    +++ ++    + +L N   G         +V  +F  +    
Sbjct: 139 LPLFILMFGMGELSKYAIIAVTVV----YLVLINTYEGVRDISPLHLDVGHNFGASRLMM 194

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R I  PG  P  + G   + G A    + +E           +G+G  I  S +     
Sbjct: 195 FRDIAFPGALPQILAGLRISLGVALLVIVAAEFVG------AKSGIGFLIWNSWQVFEVE 248

Query: 554 EVVLGVLIMCCFVLAL 569
            + +G+          
Sbjct: 249 RMYVGLAASAMLGFLF 264



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 89/227 (39%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +++ +   +    +  +   +  R+L+  ++  +   +       S  +  ++ P
Sbjct: 66  PPPSAVLEELTHLIATGEIFVHVGISLTRILAGFLLGAVPGVLIGLAMGLSPVVRALVQP 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +++    IP +  L   ++ F           EL+    I  + V+ +  + Y+ + +I 
Sbjct: 126 LVNATFPIPKVAILPLFILMFGMG--------ELSKYAIIAVTVVYLVLINTYEGVRDIS 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +V  +F  S    F  +  P ++P ++  + +S+      +VA+E +         
Sbjct: 178 PLHLDVGHNFGASRLMMFRDIAFPGALPQILAGLRISLGVALLVIVAAEFVGAKS----- 232

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            GIG  I  + +  ++  +   +     + FL+     +L R ++ W
Sbjct: 233 -GIGFLIWNSWQVFEVERMYVGLAASAMLGFLFSLGFDMLERALLPW 278


>gi|104779474|ref|YP_605972.1| alkyl sulfate ester ABC transporter permease AstB [Pseudomonas
           entomophila L48]
 gi|95108461|emb|CAK13155.1| putative alkyl sulfate ester ABC transporter AstB, permease protein
           [Pseudomonas entomophila L48]
          Length = 527

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 75/572 (13%), Positives = 177/572 (30%), Gaps = 71/572 (12%)

Query: 2   FLYNILPPFISR-RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
            L  +  PF ++ R +      LA V +  I +      ++      +V    +      
Sbjct: 12  RLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLVWQSALEFGSGE 71

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+   ++  +    +  T    S R   +++P    +  IP L ++   +
Sbjct: 72  LWGHLWISVRRLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQIPTLAWIPLFM 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E   +  +  + V  +T      + +    L E + + RL     F
Sbjct: 132 LFFGIG--------EWLKLVVLVKAVVVPVTLHTLVGVRDAQPKLREAAATLRLPVHLVF 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P  +  + ++++ GW  ++A E++   +      GIG  +    +   L  
Sbjct: 184 LRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSE------GIGYLMVWGRQLFMLDL 237

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           +   +L +  V  L D+   R                                    + +
Sbjct: 238 VFLCILVVGLVGALMDRGFSR------------------------------------LEH 261

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
           S   +  P +    +   T        P   L +         +D           +   
Sbjct: 262 SLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAANSFGWVD--------ANILSSP 313

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
              +  +        +   + L   ++ R +  +++       +G+ +G        + P
Sbjct: 314 LDVLRSLYTGLLDGSLPEALRL---SLQRTLAGLLLGGGAGFVLGLLLGLSHSSERLLGP 370

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L       + PL+ +              + +     + +L     G ++      
Sbjct: 371 SLSALRQVALFAWVPLLTAWFGLGEG----AKLVFVGLAAFFPLLIATQRGIASLSPQLG 426

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A +  +      R ++LPG  P    G   A   AW  +I +E            G+ 
Sbjct: 427 EAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSD-----GGIA 481

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  + +     +V+  ++++      L   
Sbjct: 482 SLMIGAQQLFRMDQVMAAMVLIGLVGALLGHL 513



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 98/250 (39%), Gaps = 15/250 (6%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            A ++V    N          + P D++  +   L   SLP+    +  R L+ +++   
Sbjct: 290 AAVLVVWQAANSFGWVDANILSSPLDVLRSLYTGLLDGSLPEALRLSLQRTLAGLLLGGG 349

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   L   S     +L P L  ++ + +  ++     +F      K++   LAA F 
Sbjct: 350 AGFVLGLLLGLSHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLVFVGLAAFF- 408

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +  + + ++   L E +++ RL    +   L +P + P +   + +++ 
Sbjct: 409 -------PLLIATQRGIASLSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALI 461

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   + +E  +  D      GI S +  A +   +  ++ AM+ +  V  L   L  +
Sbjct: 462 YAWLGTIGAEYFMPSD-----GGIASLMIGAQQLFRMDQVMAAMVLIGLVGALLGHL-GQ 515

Query: 262 PMIVWSNKFR 271
            +   + ++R
Sbjct: 516 RLESRATRWR 525



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 84/289 (29%), Gaps = 36/289 (12%)

Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY 342
           S VL + ++          +    S +   V      L      +     +   ++++  
Sbjct: 2   SEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVAL------WIIASHEHWMSEQILP 55

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              + W   +     G  W  +   V   T+  +  +     +  +              
Sbjct: 56  APSLVWQSALE-FGSGELWGHLWISVRRLTWGLLAGIGGGLLLGTWLGA----------- 103

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
                        + + P    LA  P   + PL +           + L   ++     
Sbjct: 104 --------SHRARTLVLPTFIALAQIPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPV-- 153

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
               + + G        +E A++  +     +  ++LP   P ++ G   A    W + +
Sbjct: 154 --TLHTLVGVRDAQPKLREAAATLRLPVHLVFLRLLLPAALPAFLAGVRLALATGWTSLL 211

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             E+ +       + G+G  +    +      V L +L++      ++R
Sbjct: 212 AVELLA------SSEGIGYLMVWGRQLFMLDLVFLCILVVGLVGALMDR 254


>gi|23098455|ref|NP_691921.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776681|dbj|BAC12956.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 276

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + + A +T   ++ A ++SL+       L+A +  +  ++ PILD MQ++P   +L   V
Sbjct: 86  MWEGAMQTLAIIIVATLVSLVIGIPVGILSAMNDGVQRIVRPILDFMQTLPSFVYLIPAV 145

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F            + A+ A F              + ++P+++ E SR+F  +  Q  
Sbjct: 146 LLFGLGG--------VPAVMATFIFAAPPAVRMTNLGIRSVPKEIVEASRAFGSTNKQLL 197

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++       V + MI         PG+G+ +  AI + ++  
Sbjct: 198 YKVQIPLAIPSIMAGVNQTIMLSLSMAVVASMI-------GAPGLGASVLTAISQVNIGL 250

Query: 241 ILYAMLTMLGVIFLYDQL 258
            L A L ++ +  + D++
Sbjct: 251 GLVAGLGIVVLAIVLDRI 268



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLI 394
           V+ +L +    +   +   IAW+  G  +  FT    L++    +W G + T+  ++V  
Sbjct: 42  VTDLLLLIPAELFTIILALIAWKVSGIGLAVFTIIGFLFIGSVDMWEGAMQTLAIIIVAT 101

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++ +I IPVGI       +   ++P    +   P+ V+    V       +   +   +
Sbjct: 102 LVSLVIGIPVGILSAMNDGVQRIVRPILDFMQTLPSFVYLIPAVLLFGLGGVPAVMATFI 161

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +     G  + P +  E + +F  T  +    + +P   P  + G     
Sbjct: 162 F----AAPPAVRMTNLGIRSVPKEIVEASRAFGSTNKQLLYKVQIPLAIPSIMAGVNQTI 217

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + + ++V+ +           GLGA +  +  + +    ++  L +    + L+R 
Sbjct: 218 MLSLSMAVVASMIG-------APGLGASVLTAISQVNIGLGLVAGLGIVVLAIVLDRI 268


>gi|253687794|ref|YP_003016984.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754372|gb|ACT12448.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 257

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V  +  
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + + +++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +E+ +       T+G+G  +  ++       V+LG+L++ 
Sbjct: 179 PELFTTVRLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 233 GIGYVLDLLL 242



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 104/263 (39%), Gaps = 22/263 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-----SLPQYASRTT 69
           +  +I  + A + +  +             P   + +    L        SL ++ + + 
Sbjct: 7   VLLSIASVAAVLTLWQVAGAKQWVDPLLLPPLSDIILTAGELAQDGYRQVSLWEHIAVSV 66

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R LSA  ++++       L   S  +  V  P +  ++ +P +  +   VV+       
Sbjct: 67  ARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAVVWLGIG--- 123

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E +  F IF +   ++      ++  + R    V+++   S  Q F+++ +P ++
Sbjct: 124 -----EASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTL 178

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L   + +++  GW  ++A+EM+          GIG  +  A        ++  +L + 
Sbjct: 179 PELFTTVRLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 250 GVIFLYDQLLF---RPMIVWSNK 269
           G+ ++ D LL    R  + W+ K
Sbjct: 233 GIGYVLDLLLVGAQRVFVPWAGK 255


>gi|163801661|ref|ZP_02195559.1| putative permease of ABC transporter [Vibrio sp. AND4]
 gi|159174578|gb|EDP59380.1| putative permease of ABC transporter [Vibrio sp. AND4]
          Length = 293

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 103 WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 162

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 163 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELIEAGKAFGASRMKLLF 214

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 215 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 267

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 268 FEAGLAIVLVAIILDRL 284



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 89/280 (31%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++           S     +   L  I     + F  +     +     I W    
Sbjct: 23  PLGEWMEMGVDWLTMNASGFFDAISIFLETIILFVVDIFKWMPPAAPIIMTATIAWLLHR 82

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 83  SIPLVVFIVLALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 135

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 136 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 191

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 192 TKVPEELIEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG---- 247

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 248 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 284


>gi|70733220|ref|YP_262993.1| aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68347519|gb|AAY95125.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 262

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
           QR++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 8   QRLAPWGLPLLLLAVWQLSVSAGWLSTRILPAPSAVIEAGVSLVRSGDIWTHLAISGWRA 67

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  +I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 68  GLGFVIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DES 123

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G 
Sbjct: 124 AKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGV 183

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 184 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 237



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  + V  +         +    P  +++     +    +  + + +  R     VI   
Sbjct: 17  LLLLAVWQLSVSAGWLSTRILPAPSAVIEAGVSLVRSGDIWTHLAISGWRAGLGFVIGGG 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 77  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P ++  +  ++ 
Sbjct: 129 VALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 189 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 242

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 243 LERVWLRWHPAYQV 256


>gi|86144740|ref|ZP_01063072.1| putative permease of ABC transporter [Vibrio sp. MED222]
 gi|85837639|gb|EAQ55751.1| putative permease of ABC transporter [Vibrio sp. MED222]
          Length = 280

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 17/237 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLRMLSAMVISLL 81
                + I+            P  ++ +V   L + +L  +     T + + +A  IS+L
Sbjct: 50  WMPPALPIVMTAAIAWYLHRKPSLVIFVVAALLTILNLGYWQEMLETFVLVFAATTISVL 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +AA    L  VL PILD+MQ++P   +L  T+V F     G V G     IFA
Sbjct: 110 IGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I            Y  +  +P +L E  ++F  S  +    + +P ++P ++  +   + 
Sbjct: 167 IAAP-----IRLTYLGVTKVPEELIEAGKAFGASRMKLLMKVELPAALPSIMAGVTQCIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + ++          G+G  +  A+   ++     A L ++ V  + D+L
Sbjct: 222 LSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 88/248 (35%), Gaps = 24/248 (9%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F +    L +     +++ L      V+  VA  +   ++GY      +Q++L    L  
Sbjct: 48  FKWMPPALPIVMTAAIAWYLHRKPSLVIFVVAALLTILNLGY------WQEMLETFVL-- 99

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
                V     I+ +I +PVGI    RP + + ++P   L+   P  V+    +  +  +
Sbjct: 100 -----VFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYL---IPTLVLF 151

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     L   +IF     I      G +  P +  E   +F  +  +    + LP   P
Sbjct: 152 GLGIVPGLISTIIFAIAAPIRL-TYLGVTKVPEELIEAGKAFGASRMKLLMKVELPAALP 210

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       + +  +++ +           GLG  +  +    +  +     L +  
Sbjct: 211 SIMAGVTQCIMLSLSMVVIAALVG-------ADGLGKPVVRALNTVNISQGFEAGLAIVL 263

Query: 565 FVLALNRF 572
             + L+R 
Sbjct: 264 VAIILDRL 271


>gi|206559984|ref|YP_002230748.1| aliphatic sulfonates transport permease [Burkholderia cenocepacia
           J2315]
 gi|198036025|emb|CAR51918.1| aliphatic sulfonates transport permease protein [Burkholderia
           cenocepacia J2315]
          Length = 270

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    +      +T R L    I              S+   + L 
Sbjct: 47  LPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALD 106

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 107 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTYHGIRSV 158

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E+++S+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 159 DANLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 212

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 213 QSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQ 265


>gi|160941492|ref|ZP_02088826.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435576|gb|EDP13343.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC
           BAA-613]
          Length = 354

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 93/267 (34%), Gaps = 17/267 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +       R   P        +     + +    + +  VP     +     D   L + 
Sbjct: 98  DRRTAEDLRYRAPLFSAFFLLLTFYDYLTLKTGILSQPFVPCMNSILNIAWEDRAYLLEC 157

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +     I +    V       S +    + P++  +  IP   ++   +V   
Sbjct: 158 TLHTLRLLFLGYFIGIALGLVTGITCGYSEKARYWINPVIKFLGPIPTATWIPIIMVVAA 217

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +L+ G        A+F I     + +T +    + N+ +D  E +R+   S  Q  + + 
Sbjct: 218 SLFRG--------AVFIIALGSWFAVTVASMSGIQNVDKDFFEAARTLGASEGQLVFRVA 269

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++     +MS     ++ +EM+ V        G+G Y+  A        +  A
Sbjct: 270 IPHAMPSILQGCTQAMSSSCVAIMIAEMMGVKA------GLGWYMNWAKSWAAYDKMFAA 323

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSN 268
           +  +  +  +      L+ R ++ W N
Sbjct: 324 LFVICFIFTIVTKVLDLIKRRVLRWQN 350



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 77/206 (37%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +  ++D  Y++     T+  + +   I   + +  GI  G+       I P  + L  
Sbjct: 143 ILNIAWEDRAYLLECTLHTLRLLFLGYFIGIALGLVTGITCGYSEKARYWINPVIKFLGP 202

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   + P+++   +            ++  G+ + +    ++G      DF E A +  
Sbjct: 203 IPTATWIPIIMVVAASLFRG----AVFIIALGSWFAVTVASMSGIQNVDKDFFEAARTLG 258

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    + +P   P  + G   A   +  A +++E+           GLG Y+  + 
Sbjct: 259 ASEGQLVFRVAIPHAMPSILQGCTQAMSSSCVAIMIAEMMG------VKAGLGWYMNWAK 312

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              ++ ++   + ++C     + + L
Sbjct: 313 SWAAYDKMFAALFVICFIFTIVTKVL 338


>gi|328880827|emb|CCA54066.1| Alkanesulfonates transport system permease protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 286

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 84/268 (31%), Gaps = 12/268 (4%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            SPL +                P    +      +  +        V       +  +I 
Sbjct: 14  ISPLPDVEALTPDRGAGRGLTVPRWLRRTVGPVLLLALWQTLSATGVLPADALASPGTIA 73

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
                        +     +++ RV   ++I  ++ I + +  G        +    Q+L
Sbjct: 74  RAGAELI--GDGTLPTAMGVSLRRVAAGLLIGGVVGIALALLSGLSRLGEDLVDAPVQML 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++  +             L+  G  +++  NV AG         E   S
Sbjct: 132 RTVPWVGLIPLLIIWLGIGEAPK----VALIALGVAFHLYLNVYAGIRGVDAQLVEAGRS 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +      R+++LPG  P  +TG   +   AW A +  E  +         G+G  + +
Sbjct: 188 LGLGRRGLVRHVVLPGALPGAMTGLRYSLATAWLALVFGESIN------ADAGIGFLMNQ 241

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + E      +V+ +++     L  +  +
Sbjct: 242 AREFFRTDVIVVCLVVYAFLGLLADALV 269



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 95/252 (37%), Gaps = 17/252 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   L   +    +        P  I       +   +LP     +  R+ + ++I  +
Sbjct: 46  VLLLALWQTLSATGVLPADALASPGTIARAGAELIGDGTLPTAMGVSLRRVAAGLLIGGV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L+  SR    ++   + +++++P +G +   +++            E   +  
Sbjct: 106 VGIALALLSGLSRLGEDLVDAPVQMLRTVPWVGLIPLLIIWLGIG--------EAPKVAL 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     +++  ++Y  +  +   L E  RS  L       ++ +P ++PG +  +  S++
Sbjct: 158 IALGVAFHLYLNVYAGIRGVDAQLVEAGRSLGLGRRGLVRHVVLPGALPGAMTGLRYSLA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  +V       G+++    GIG  +  A +      I+  ++    +  L D L   
Sbjct: 218 TAWLALV------FGESINADAGIGFLMNQAREFFRTDVIVVCLVVYAFLGLLADALVRT 271

Query: 259 LFRPMIVWSNKF 270
           L R ++ W   F
Sbjct: 272 LERLLLQWRPTF 283


>gi|227114854|ref|ZP_03828510.1| putative taurine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 257

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V  +  
Sbjct: 63  AVSVARALGAFSVAIILGVPLGLLMGLSPPIAAIFNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + + +++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +E+ +       T+G+G  +  ++       V+LG+L++ 
Sbjct: 179 PELFTTVRLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 233 GIGYVLDLLL 242



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 103/256 (40%), Gaps = 27/256 (10%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVH----------SLPQYASRTTLRMLSAM 76
           + + +    + G ++   P  +  +  I L             SL ++ + +  R L A 
Sbjct: 14  VAVVLALWQVAGAKQWVDPLLLPPLSDIILTAGELAQDGYRQVSLWEHIAVSVARALGAF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++++       L   S  +  +  P +  ++ +P +  +   VV+            E 
Sbjct: 74  SVAIILGVPLGLLMGLSPPIAAIFNPFVQFLRPLPKIALIPLAVVWLGIG--------EA 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +  F IF +   ++      ++  + R    V+++   S  Q F+++ +P ++P L   +
Sbjct: 126 SKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTLPELFTTV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++  GW  ++A+EM+          GIG  +  A        ++  +L + G+ ++ D
Sbjct: 186 RLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLGGIGYVLD 239

Query: 257 QLLF---RPMIVWSNK 269
            LL    R  + W+ K
Sbjct: 240 LLLVGAQRVFVPWAGK 255


>gi|326332259|ref|ZP_08198539.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae
           bacterium Broad-1]
 gi|325949965|gb|EGD42025.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae
           bacterium Broad-1]
          Length = 285

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 93/232 (40%), Gaps = 17/232 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +       +    L +  + +  R     ++  L  FV   +   S     +
Sbjct: 63  RTLASPVQLAGTAWELIGSGQLQEAIAVSARRAALGFLLGALIAFVLGGIVGLSALGDAL 122

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P++ +++++P+ G +   +++F           E   I+ +    +  +  ++  +L 
Sbjct: 123 VDPLVQMLRTLPLFGLVPLFIIWFGI--------KEEPKIYLVALFVIVPLYLNLVAALR 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +  DL EV+ + RL+  ++  +L +P   PGL+  +  ++   W  ++ +E +  G   
Sbjct: 175 GVDPDLAEVAGALRLTWTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVNAGA-- 232

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
               G+G  I  A        I+  +L    +  + D   +LL R  + W +
Sbjct: 233 ----GLGFLINNARDFLQTDVIVVGLLCYAALGLVTDWAVRLLERRALRWRD 280



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 14/277 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVN 369
                  R +   R       L++  +    ++L  +  F  +  +        +     
Sbjct: 15  AGAAPAGRAVSARRSVLSPRTLKILRSLSPVFVLAAWQLFSSLGILDERTLASPVQLAGT 74

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +       +     ++  R  +  ++ ++I   +G  +G      + + P  Q+L   P
Sbjct: 75  AWELIGSGQLQEAIAVSARRAALGFLLGALIAFVLGGIVGLSALGDALVDPLVQMLRTLP 134

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                PL +             ++L +I      +  N++A       D  EVA +  +T
Sbjct: 135 LFGLVPLFIIWFGIKEEPKIYLVALFVIV----PLYLNLVAALRGVDPDLAEVAGALRLT 190

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                R++ LP + P  + G   A G AW A IV+E  + G       GLG  I  + + 
Sbjct: 191 WTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVNAG------AGLGFLINNARDF 244

Query: 550 GSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
                +V+G+L      L  +   R L      +   
Sbjct: 245 LQTDVIVVGLLCYAALGLVTDWAVRLLERRALRWRDE 281


>gi|302337418|ref|YP_003802624.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634603|gb|ADK80030.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 284

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   ++++++++LL        ++K   +  ++ P+LD MQ++P   +L   
Sbjct: 88  GLWGETMETLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYLIPA 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G V G     IFA+  S            +  +P++++E ++SF  +  Q 
Sbjct: 148 VLFFKL---GPVPGVIATLIFAMPPS-----VRLTNLGIRQVPKEIKEAAKSFGATSHQM 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                +P ++P ++  +  ++      VV + MI  G       G+G+ +   I +  + 
Sbjct: 200 LLKAELPVALPTILAGVNQTIMLALSMVVIAGMIGAG-------GLGNEVLKGITQLKID 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 + ++ +    D++
Sbjct: 253 QGFEGGIAIVILAMYLDRV 271



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 11/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  VV  +I+A +I +PVGIW   +  +   ++P    +   PA V+    +  V ++ 
Sbjct: 96  TLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYL---IPAVLFFK 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P   +   +IF      +     G    P + KE A SF  T  +      LP   P 
Sbjct: 153 LGPVPGVIATLIF-AMPPSVRLTNLGIRQVPKEIKEAAKSFGATSHQMLLKAELPVALPT 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A +  +++ +   G       GLG  + +   +    +   G + +   
Sbjct: 212 ILAGVNQTIMLALSMVVIAGMIGAG-------GLGNEVLKGITQLKIDQGFEGGIAIVIL 264

Query: 566 VLALNR 571
            + L+R
Sbjct: 265 AMYLDR 270


>gi|332716874|ref|YP_004444340.1| aliphatic sulfonate ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325063559|gb|ADY67249.1| aliphatic sulfonate ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 259

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    ++  R +    +   I    G+  G      S      Q++   P     PL
Sbjct: 56  GELIANIGVSSARALAGFAVGGAIGFIFGLANGLSRFSRSFTDTTLQMIRNIPHLALIPL 115

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + I  N + G         E+  ++ ++ +  +R 
Sbjct: 116 VILWFGI----DEEAKLFLVALGVFFPIYINTLLGIQGVDPQLVEMGRTYGMSSFTLFRR 171

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P   TG   A G  W   IV+E  S       ++GLG    ++ E      VV
Sbjct: 172 VILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYMAMQAREFLLIDVVV 225

Query: 557 LGVLIMCCFVLALNRF 572
           L +LI        + F
Sbjct: 226 LSILIYALLGKLADSF 241



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     L    L      ++ R L+   +     F++      SR       
Sbjct: 39  LPAPSAVAEAFWRLLLSGELIANIGVSSARALAGFAVGGAIGFIFGLANGLSRFSRSFTD 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A +F +     + +  +    +  +
Sbjct: 99  TTLQMIRNIPHLALIPLVILWFGID--------EEAKLFLVALGVFFPIYINTLLGIQGV 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R++ +S +  F  + +P ++P +   +  ++   W  ++ +E I        
Sbjct: 151 DPQLVEMGRTYGMSSFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETISSSS---- 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G     A +   +  ++ ++L    +  L D   + L    + W   F+
Sbjct: 207 --GLGYMAMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAFK 257


>gi|50120464|ref|YP_049631.1| putative taurine transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610990|emb|CAG74435.1| putative taurine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 257

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    IA I+ +P+G+ +G  P  ++   PF Q L   P     PL V  +  
Sbjct: 63  AVSVARALSAFSIAIILGVPLGLLMGLSPPTAAVFNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + + +++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +E+ +       T+G+G  +  ++       V+LG+L++ 
Sbjct: 179 PELFTTVRLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 564 CFVLALNRFL 573
               AL+  L
Sbjct: 233 GIGYALDLLL 242



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 101/256 (39%), Gaps = 27/256 (10%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVH----------SLPQYASRTTLRMLSAM 76
           +   +    L G ++   P  +  +  I L             SL ++ + +  R LSA 
Sbjct: 14  VAAVLALWQLAGAKQWVDPLLLPPLSDIILTAGELAQDGYRQVSLWEHIAVSVARALSAF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I+++       L   S     V  P +  ++ +P +  +   VV+            E 
Sbjct: 74  SIAIILGVPLGLLMGLSPPTAAVFNPFVQFLRPLPKIALIPLAVVWLGIG--------EA 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +  F IF +   ++      ++  + R    V+++   S  Q F+++ +P ++P L   +
Sbjct: 126 SKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTLPELFTTV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++  GW  ++A+EM+          GIG  +  A        ++  +L + G+ +  D
Sbjct: 186 RLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLGGIGYALD 239

Query: 257 QLLF---RPMIVWSNK 269
            LL    R  + W+ K
Sbjct: 240 LLLVGAQRVFVPWAGK 255


>gi|308172161|ref|YP_003918866.1| glycine betaine ABC transporter permease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605025|emb|CBI41396.1| glycine betaine ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 282

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +I   L     T        I  + +D         +T   ++++++IS++     
Sbjct: 52  ILLTVIFAALAWWISTKGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLISIIIGVPI 111

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IFA+    
Sbjct: 112 GVWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIFAMP--- 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                      +  +P DL E + +F  +  Q+ + + +P +   ++  +  S+      
Sbjct: 166 --PTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLALSM 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+         PG+GS +  A+ +      + A + ++ V    D++
Sbjct: 224 VVIAAMV-------GAPGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L      ++  +   +AW      +  FT    L + +LG       T+  VV  ++I+
Sbjct: 45  GLGYIPSILLTVIFAALAWWISTKGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+G+W   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 105 IIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +   + G    P D  E   +F  T  +    + LP      + G   +   A
Sbjct: 163 --AMPPTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 221 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268


>gi|307329513|ref|ZP_07608673.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306884818|gb|EFN15844.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 301

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 90/274 (32%), Gaps = 29/274 (10%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCV---------VCGVAIGIAWQSIGYIVNHFT 372
            +R H     ++L     V   L + W            +      IA        +   
Sbjct: 38  PVRAHRRRRGIELALALAVPSALILLWQLAADQHWIDSRIYPAPSTIAADGWRRAADGKL 97

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + DV         T+ RVV    + +      G+ +G    + + ++P    L   P   
Sbjct: 98  WPDVW-------ATLQRVVAGYALGTAAGYLFGLVMGALRMVRAALEPLLDALYVVPKLA 150

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ ++               L+     +++  + +A        ++E    F    W+
Sbjct: 151 LLPVFLNMFGLGEGPQ----IALVATTVFFFVWISTMAAVMGVAEGYREAGQVFGAGPWQ 206

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +R+++LP   P  + G   A G A    + SE  +         GLG  I +S      
Sbjct: 207 MFRHVLLPASLPQVLVGMRVASGVAVLVIVASEQIA------ANDGLGHLIFDSRTLFQN 260

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             + +G++ +    +  +   RF+   L  +  R
Sbjct: 261 DVMFVGIVCVAVLGVVFSELVRFIGRRLTPWAPR 294



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 24  AFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           A +L+  +         +    P  I            L      T  R+++   +    
Sbjct: 59  ALILLWQLAADQHWIDSRIYPAPSTIAADGWRRAADGKLWPDVWATLQRVVAGYALGTAA 118

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            +++  +    R +   L P+LD +  +P L  L   +  F      +        I  +
Sbjct: 119 GYLFGLVMGALRMVRAALEPLLDALYVVPKLALLPVFLNMFGLGEGPQ--------IALV 170

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T+  + +  S   ++  +     E  + F    WQ F ++ +P S+P ++  M ++   
Sbjct: 171 ATTVFFFVWISTMAAVMGVAEGYREAGQVFGAGPWQMFRHVLLPASLPQVLVGMRVASGV 230

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
               +VASE I   D      G+G  I  +        +   ++ +  +  ++    + +
Sbjct: 231 AVLVIVASEQIAAND------GLGHLIFDSRTLFQNDVMFVGIVCVAVLGVVFSELVRFI 284

Query: 260 FRPMIVWSNK 269
            R +  W+ +
Sbjct: 285 GRRLTPWAPR 294


>gi|296332656|ref|ZP_06875116.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305673000|ref|YP_003864672.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149936|gb|EFG90825.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305411244|gb|ADM36363.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 282

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++        A++   +  ++ PILD+MQ++P   +L   + +F 
Sbjct: 90  MLQTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  Q+ + + 
Sbjct: 149 --NIGVVPGVVASVIFAMP-----PTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKVQ 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + M+         PG+GS +  A+ +      + A
Sbjct: 202 LPLATKTILAGINQSIMLALSMVVIAAMV-------GAPGLGSEVYSAVTQLKTGVGVEA 254

Query: 245 MLTMLGVIFLYDQL 258
            + ++ V    D++
Sbjct: 255 GIAIVIVAITLDRI 268



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L      ++  +   +AW      +  FT    L + +LG       T+  V+  +II+
Sbjct: 45  GLGFIPSILLTIIFAALAWWISTRGIALFTLIGFLLIDYLGYWDPMLQTLALVLTSVIIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ +P+GIW   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 105 IVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +   + G    P D  E   +F  T  +    + LP      + G   +   A
Sbjct: 163 --AMPPTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKVQLPLATKTILAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 221 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268


>gi|240169163|ref|ZP_04747822.1| binding-protein dependent transport system inner membrane protein
           [Mycobacterium kansasii ATCC 12478]
          Length = 274

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 87/238 (36%), Gaps = 12/238 (5%)

Query: 340 VSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V   L + W   V    +   +    +  +           +I    +++ R+ +   I 
Sbjct: 33  VPIGLVVAWHVAVVSGVLPHTLVAGPLDSLEAFVRLAMDGTLIEHAWVSVRRIAIGFAIG 92

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S + I  G  IG  P  +  ++P A  L   PA  + P++V       L+       L+ 
Sbjct: 93  STVGILAGAVIGTSPLAAKILEPTALTLIPVPAVAWIPVLVIVFGIGELSK----VTLVA 148

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G+   ++    AG  +   D  EVA  +  + W   R ++LP   P  V  A  A   +
Sbjct: 149 IGSATTLILATAAGIRSASQDLVEVAQLYEKSRWTVLRTVLLPSAAPSIVASARVAMALS 208

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           W   + +EV +         GLG  I +S        ++ G+L +     A +  L  
Sbjct: 209 WTLLVAAEVIA------SANGLGWLIWDSRNFARPAAMIAGMLAIGILGKATDGLLAR 260



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D ++         +L ++A  +  R+     I      +   +   S     +L P
Sbjct: 56  AGPLDSLEAFVRLAMDGTLIEHAWVSVRRIAIGFAIGSTVGILAGAVIGTSPLAAKILEP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
               +  +P + ++   V+ F           EL+ +  +       +  +    + +  
Sbjct: 116 TALTLIPVPAVAWIPVLVIVFGIG--------ELSKVTLVAIGSATTLILATAAGIRSAS 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +DL EV++ +  S W     + +P + P +V +  ++M+  W  +VA+E+I   +     
Sbjct: 168 QDLVEVAQLYEKSRWTVLRTVLLPSAAPSIVASARVAMALSWTLLVAAEVIASAN----- 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271
            G+G  I  +       A++  ML +  +    D LL    R +  W   +R
Sbjct: 223 -GLGWLIWDSRNFARPAAMIAGMLAIGILGKATDGLLARFGRYLTRWDRSYR 273


>gi|239624588|ref|ZP_04667619.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520974|gb|EEQ60840.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 254

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 10/166 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV +  + A+++ +  G+ +G+    S+  +P  +++   PA  + PL+   +    
Sbjct: 64  SLRRVFMGWLAATLVGVLFGLMLGWNRTFSAVCKPVFEMIRPIPAIAWIPLITIWLGVGE 123

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +++  G    I+ N   G S  P     V   F     + +  I+LP   P 
Sbjct: 124 TSK----IVIVFIGAVMPIVVNTYTGVSMVPELNINVGKIFGANSRQMFLKIVLPSSLPA 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              G  TA G AW   + +E+ S        TGLG  +   +    
Sbjct: 180 IFAGLKTAVGVAWTVVLAAEMIS------AKTGLGYIVNLGSNSAD 219



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 86/215 (40%), Gaps = 15/215 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++  +   +  R+    + + L   ++  +   +R    V  P+ ++++ IP + ++  
Sbjct: 55  ANIGIHIVDSLRRVFMGWLAATLVGVLFGLMLGWNRTFSAVCKPVFEMIRPIPAIAWIPL 114

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++            E + I  +F   V  +  + Y  +  +P     V + F  +  Q
Sbjct: 115 ITIWLGVG--------ETSKIVIVFIGAVMPIVVNTYTGVSMVPELNINVGKIFGANSRQ 166

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S+P +   +  ++   W  V+A+EMI          G+G  + L     D+
Sbjct: 167 MFLKIVLPSSLPAIFAGLKTAVGVAWTVVLAAEMISAKT------GLGYIVNLGSNSADI 220

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
             ++  ++ +  +  L   +L R +  W   ++ E
Sbjct: 221 ALVVIGIIVIAVIGALLSAVLTR-VERWLCPWKEE 254


>gi|326314879|ref|YP_004232551.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371715|gb|ADX43984.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 305

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A++  +PVGI +G          P  +     P   + PL+V       
Sbjct: 114 STIRVFGAFALAAVTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGI-- 171

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+       I     AG  +   +    A S     W+  R++I+P   P 
Sbjct: 172 --DETAKILLIYLACFAPIALAARAGVRSASVEQIHAALSLGANRWQLVRHVIVPAALPE 229

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G  W   + +E+ +       T G+G  +  ++       VV G+L++   
Sbjct: 230 ILVGLRIAIGFGWTTLVAAEMVA------ATVGIGQVVLNASNFLRTDLVVAGILVIGLV 283

Query: 566 VLALN 570
               +
Sbjct: 284 AWTFD 288



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 18/191 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +T+R+  A  ++ +           SR    V  P ++  + +P L +L   V
Sbjct: 107 LWRHLQWSTIRVFGAFALAAVTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIV 166

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   + WQ  
Sbjct: 167 IWFGID--------ETAKILLIYLACFAPIALAARAGVRSASVEQIHAALSLGANRWQLV 218

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ VP ++P ++  + +++  GW  +VA+EM+          GIG  +  A        
Sbjct: 219 RHVIVPAALPEILVGLRIAIGFGWTTLVAAEMVA------ATVGIGQVVLNASNFLRTDL 272

Query: 241 ----ILYAMLT 247
               IL   L 
Sbjct: 273 VVAGILVIGLV 283


>gi|218675844|ref|YP_002394663.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
 gi|218324112|emb|CAV25283.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
          Length = 280

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 17/237 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLRMLSAMVISLL 81
                + I+            P  ++ +V   L + +L  +     T + + +A  IS+L
Sbjct: 50  WMPPALPIVITAAIAWYLHRKPSLVIFVVAALLTILNLGYWQEMLETFVLVFAATTISVL 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +AA    L  VL PILD+MQ++P   +L  T+V F     G V G     IFA
Sbjct: 110 IGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFA 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I            Y  +  +P +L E  ++F  S  +    + +P ++P ++  +   + 
Sbjct: 167 IAAP-----IRLTYLGVTKVPEELIEAGKAFGASRMKLLMKVELPAALPSIMAGVTQCIM 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + ++          G+G  +  A+   ++     A L ++ V  + D+L
Sbjct: 222 LSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 18/277 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           +++           +     +   L  +     + F  +     +     I W+      
Sbjct: 13  QWMEAGVDWLTINAAGFFDAISIFLETVIMFLVDVFKWMPPALPIVITAAIAWYLHRKPS 72

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +     ++  I+N   +Q++L    L       V     I+ +I +PVGI    RP + 
Sbjct: 73  LVIFVVAALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPVGIMAAHRPWLY 125

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + ++P   L+   P  V+    +  +  + L     L   +IF     I      G +  
Sbjct: 126 TVLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGVTKV 181

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P +  E   +F  +  +    + LP   P  + G       + +  +++ +         
Sbjct: 182 PEELIEAGKAFGASRMKLLMKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG------- 234

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|298290854|ref|YP_003692793.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927365|gb|ADH88174.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 280

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 22/243 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------------LYVIWLGCITM 387
            S ++ + W   V  +    A   +G+I  H                    ++    +++
Sbjct: 27  SSGLIALSWLVPVLLLVTWEALARLGWIEPHLLPAPSKVALTAYKLTVSGTLLHDLAVSL 86

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R  +   I   I   +G  +GF     + I    Q++ A P     PLV+  +      
Sbjct: 87  LRAAIGFAIGGGIGFALGTLVGFSRIAEAFIDRSVQMVRAIPFLAVLPLVIVWLGVGEGQ 146

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+  G  + I  N   G         E+     +  W     IILPG  P  +
Sbjct: 147 K----IFLVALGVAFPIYVNTTLGIRQVDPKLVELGRVQGLNTWELIARIILPGALPSIL 202

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   +   AW A +V+E            GLG    ++ E      +VL V+I     +
Sbjct: 203 TGVRFSLATAWLALVVAETIG------AQAGLGFLALDAREFLRTDVIVLTVIIYALIGV 256

Query: 568 ALN 570
           A +
Sbjct: 257 AAD 259



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--- 58
             Y+  P    R     +  L   V V+ ++            P  +     + L     
Sbjct: 13  RTYSSAPAPGFRLGSSGLIALSWLVPVLLLVTWEALARLGWIEPHLLPAPSKVALTAYKL 72

Query: 59  ---HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               +L    + + LR      I     F   TL   SR     +   + ++++IP L  
Sbjct: 73  TVSGTLLHDLAVSLLRAAIGFAIGGGIGFALGTLVGFSRIAEAFIDRSVQMVRAIPFLAV 132

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +V+       K        IF +     + +  +    +  +   L E+ R   L+
Sbjct: 133 LPLVIVWLGVGEGQK--------IFLVALGVAFPIYVNTTLGIRQVDPKLVELGRVQGLN 184

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+    + +P ++P ++  +  S++  W  +V +E I          G+G     A + 
Sbjct: 185 TWELIARIILPGALPSILTGVRFSLATAWLALVVAETIG------AQAGLGFLALDAREF 238

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
                I+  ++    +    D
Sbjct: 239 LRTDVIVLTVIIYALIGVAAD 259


>gi|302537486|ref|ZP_07289828.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302446381|gb|EFL18197.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 322

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R      IA ++ +P+G+ IG+   +++ + P  +L     A    P+ V  +   
Sbjct: 130 ASLTRSFGGFAIAVVVAVPLGLLIGWYRPVAAFLGPLLELFRNTAALALLPVFVLLLGIG 189

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++++   W IL N I+           +A S  ++  R ++ +ILP   P
Sbjct: 190 ETSK----VSIVVYACVWPILLNTISAVGNADPTLVRLARSMDLSTPRLFQKVILPASVP 245

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +    + +E+           GLG  I  S    + P++  G++ +  
Sbjct: 246 AVFTGIRLAGAVSILVLVAAEMIG------AKAGLGYLINASQFNFAIPQMYAGIVTISA 299

Query: 565 FVLALNRFL 573
             +A N+ L
Sbjct: 300 IGVAFNQVL 308



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L ++A  +  R      I+++       L    R +   L P+L++ ++   L  
Sbjct: 119 LGDGQLGEHARASLTRSFGGFAIAVVVAVPLGLLIGWYRPVAAFLGPLLELFRNTAALAL 178

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   V+        KV          +  + VW +  +   ++ N    L  ++RS  LS
Sbjct: 179 LPVFVLLLGIGETSKVS--------IVVYACVWPILLNTISAVGNADPTLVRLARSMDLS 230

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + F  + +P S+P +   + ++ +     +VA+EMI          G+G  I  +   
Sbjct: 231 TPRLFQKVILPASVPAVFTGIRLAGAVSILVLVAAEMIGAKA------GLGYLINASQFN 284

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +  +   ++T+  +   ++Q+L    R + +W
Sbjct: 285 FAIPQMYAGIVTISAIGVAFNQVLVAVERRLSLW 318


>gi|163747109|ref|ZP_02154465.1| glycine betaine/proline ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161379670|gb|EDQ04083.1| glycine betaine/proline ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 341

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I ++ ++ + +  +     +V +V   L       +  +T   +     I +L    
Sbjct: 110 FIMIPLLMLITYAVGRSLKLVGLVALVFGFLAFIDFYDHTMQTLAIIFVCAFICVLLGVP 169

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R+   ++P+LD++Q++P   +L   +  F    P            AI   
Sbjct: 170 IGIAMARSDRVQRSMIPVLDMLQTLPPFVYLIPLIFLFSVTEPKLYG-------IAIILY 222

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + +D+ E + +F ++  QK + + +P ++P ++  +  ++     
Sbjct: 223 AIVPVVRLTDLGIRLVDQDVIEAADAFGMTNRQKLFKVQIPLALPNIMAGVNQTIMMSLA 282

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++         PG+G  +   I+  +L   L + L ++ +  + D++
Sbjct: 283 MVVIASLVS-------APGLGVLVLRGIRSLELGVGLLSGLGIVLLAIILDRV 328



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              +    ++   A+G + + +G +   F +   +        T+  + V   I  ++ +
Sbjct: 109 WFIMIPLLMLITYAVGRSLKLVGLVALVFGFLAFIDFYDHTMQTLAIIFVCAFICVLLGV 168

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +     +   + P   +L   P  V+    +  +  + +       + +I     
Sbjct: 169 PIGIAMARSDRVQRSMIPVLDMLQTLPPFVYL---IPLIFLFSVTEPKLYGIAIILYAIV 225

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      D  E A +F +T  +    + +P   P  + G       +    +
Sbjct: 226 PVVRLTDLGIRLVDQDVIEAADAFGMTNRQKLFKVQIPLALPNIMAGVNQTIMMSLAMVV 285

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           ++ + S         GLG  +            +L  L +    + L+R
Sbjct: 286 IASLVS-------APGLGVLVLRGIRSLELGVGLLSGLGIVLLAIILDR 327


>gi|182677547|ref|YP_001831693.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633430|gb|ACB94204.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 286

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+     + + + + +GI +G  P +   + PF    A  PA  + PL++       
Sbjct: 94  SLWRIAAGFSVGASLGLILGIAMGLSPVVEDIVSPFFLAFAQVPAIGWVPLLMLVAGIGE 153

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L++       +  N   G    P  + EV            R+IILP   P 
Sbjct: 154 T----LKILVIAKAALVPVAVNTQRGLHNVPKSYLEVGRVLTFDLKPMLRHIILPAAVPD 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G       AW A +  E+ +         GLG       +      V++ ++++   
Sbjct: 210 IFSGIRYGLTNAWLALVAVELIA------SAEGLGYLTVWGRQLFQLDVVIMAMIVIGTI 263

Query: 566 VLALNRFL 573
              L+R L
Sbjct: 264 GFLLDRGL 271



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+ S +  R+ +   +      +       S  +  ++ 
Sbjct: 68  LPAPSLVIETFQDYWASGELWQHCSYSLWRIAAGFSVGASLGLILGIAMGLSPVVEDIVS 127

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P       +P +G++   ++             E   I  I  + +  +  +  + L N+
Sbjct: 128 PFFLAFAQVPAIGWVPLLMLVAGIG--------ETLKILVIAKAALVPVAVNTQRGLHNV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+   EV R           ++ +P ++P +   +   ++  W  +VA E+I   +    
Sbjct: 180 PKSYLEVGRVLTFDLKPMLRHIILPAAVPDIFSGIRYGLTNAWLALVAVELIASAE---- 235

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             G+G       +   L  ++ AM+ +  + FL D   QL+   ++ W
Sbjct: 236 --GLGYLTVWGRQLFQLDVVIMAMIVIGTIGFLLDRGLQLIESHLLSW 281


>gi|227822905|ref|YP_002826877.1| proline/glycine betaine ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341906|gb|ACP26124.1| proline/glycine betaine ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 281

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI I+  L    + +        +  + +      Q  + T   +L+A  +S+     
Sbjct: 54  LIVIAIVTALAWWFRRSIGIAAFTCLGLLLIVNQGYWQETTETLALVLAASFVSMAVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA+   +  ++ PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 LGIVAARRAWVYSIMRPILDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + SF  + WQ    + +PF+MP ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPSLVEAAESFGATPWQVLRKVEIPFAMPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     + L ++ +  + D+L 
Sbjct: 226 MVVIAALV-------GADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             V+  V     W      +  FT   +L ++  G       T+  V+    ++  + +P
Sbjct: 54  LIVIAIVTALAWWFRRSIGIAAFTCLGLLLIVNQGYWQETTETLALVLAASFVSMAVGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    R  + S ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 LGIVAARRAWVYSIMRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A SF  T W+  R + +P   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPSLVEAAESFGATPWQVLRKVEIPFAMPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +        L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272


>gi|227327215|ref|ZP_03831239.1| putative taurine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 257

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V  +  
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + + +++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +E+ +       T+G+G  +  ++       V+LG+L++ 
Sbjct: 179 PELFTTVRLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 564 CFVLALNRFL 573
               AL+  L
Sbjct: 233 GIGYALDLLL 242



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 27/256 (10%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVH----------SLPQYASRTTLRMLSAM 76
           +   ++     G Q+   P  +  +  I L             SL ++ + +  R LSA 
Sbjct: 14  VAAVLVLWQWAGAQQWVDPLLLPPLSDIILTAGELAQDGYRQVSLWEHIAVSVARALSAF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++++       L   S  +  V  P +  ++ +P +  +   VV+            E 
Sbjct: 74  SVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAVVWLGIG--------EA 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +  F IF +   ++      ++  + R    V+++   S  Q F+++ +P ++P L   +
Sbjct: 126 SKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIFFHVVLPDTLPELFTTV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++  GW  ++A+EM+          GIG  +  A        ++  +L + G+ +  D
Sbjct: 186 RLAIGIGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLGGIGYALD 239

Query: 257 QLLF---RPMIVWSNK 269
            LL    R  + W+ K
Sbjct: 240 LLLVGAQRVFVPWAGK 255


>gi|154684792|ref|YP_001419953.1| OpuAB [Bacillus amyloliquefaciens FZB42]
 gi|154350643|gb|ABS72722.1| OpuAB [Bacillus amyloliquefaciens FZB42]
          Length = 282

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +I   L     T        I  + +D         +T   ++++++IS++     
Sbjct: 52  ILLTVIFAALAWWISTRGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLISIIIGVPI 111

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IFA+    
Sbjct: 112 GIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIFAMP--- 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                      +  +P DL E + +F  +  Q+ + + +P +   ++  +  S+      
Sbjct: 166 --PTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLALSM 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+         PG+GS +  A+ +      + A + ++ V    D++
Sbjct: 224 VVIAAMV-------GAPGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L      ++  +   +AW      +  FT    L + +LG       T+  VV  ++I+
Sbjct: 45  GLGFIPSILLTVIFAALAWWISTRGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+GIW   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 105 IIIGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +   + G    P D  E   +F  T  +    + LP      + G   +   A
Sbjct: 163 --AMPPTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 221 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268


>gi|114332018|ref|YP_748240.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
 gi|114309032|gb|ABI60275.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosomonas eutropha C91]
          Length = 278

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 14/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +  + T  R+ + M+I LL +   A +  +   L  +++P++  +  I  + ++ FT
Sbjct: 81  GLFESTTITLGRVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAWIPFT 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V      P        AA+F +F + +  MT S+  +L +IP +  +++ +   S  + 
Sbjct: 141 IVVIGIGGP--------AAVFIVFMAVLGTMTLSLIAALDSIPDEYLKIAHNLGTSRIRM 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +WY+ +P  +P  +  + MS  G W  V+A EM  +        G+G  I +A +  ++ 
Sbjct: 193 WWYIRLPAIIPSTMTAIRMSFFGAWMAVLAGEMAGLNS------GLGYMIIMAQQMYNMK 246

Query: 240 AILYAMLTMLGVIFLYDQ 257
            ++  +L +  + F  D+
Sbjct: 247 LVMVGILAIGFIGFAIDR 264



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 10/198 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q    +     IT+ RV   ++I  ++   + I +   P +   I P  Q LA      +
Sbjct: 77  QQKTGLFESTTITLGRVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAW 136

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P  +  +             ++       +  ++IA   + P+++ ++A +   +  R 
Sbjct: 137 IPFTIVVIGIGG----PAAVFIVFMAVLGTMTLSLIAALDSIPDEYLKIAHNLGTSRIRM 192

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           W YI LP I P  +T    +  GAW A +  E+A         +GLG  I  + +  +  
Sbjct: 193 WWYIRLPAIIPSTMTAIRMSFFGAWMAVLAGEMAGL------NSGLGYMIIMAQQMYNMK 246

Query: 554 EVVLGVLIMCCFVLALNR 571
            V++G+L +     A++R
Sbjct: 247 LVMVGILAIGFIGFAIDR 264


>gi|85706087|ref|ZP_01037182.1| taurine ABC transporter, permease protein [Roseovarius sp. 217]
 gi|85669251|gb|EAQ24117.1| taurine ABC transporter, permease protein [Roseovarius sp. 217]
          Length = 420

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+V   + +++ IP+G  +G          P  + +   P     PLV+   +   
Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWQALAR 289

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +       +  T      +  AG S         A S   + W+  R++I+P   P 
Sbjct: 290 AARSSCCPRGALIMT-----ISARAGVSGVAISKVHAAYSLGASKWQLMRHVIVPNSLPE 344

Query: 506 YVTGAITACGGAWNASIVSEVAS 528
             TGA  A G  W   + +E+ +
Sbjct: 345 IFTGARVAMGVCWGTVVAAELVA 367



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 15/184 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L ++   +  R++    +  L           S        PI++ M+ +P L  +   
Sbjct: 222 TLWEHLYWSLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 281

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++       +       A+          MT S    +  +       + S   S WQ 
Sbjct: 282 IIWQALARAARSSCCPRGALI---------MTISARAGVSGVAISKVHAAYSLGASKWQL 332

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ VP S+P +     ++M   W  VVA+E++          G G  I +A + Q   
Sbjct: 333 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASRFQLTD 386

Query: 240 AILY 243
            +L 
Sbjct: 387 IVLM 390


>gi|300780046|ref|ZP_07089902.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium genitalium ATCC 33030]
 gi|300534156|gb|EFK55215.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium genitalium ATCC 33030]
          Length = 293

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 96/243 (39%), Gaps = 16/243 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           F N    +   +++ I+ ++   ++   +    +    + + +    +   +T   +L +
Sbjct: 44  FSNALLSIPVFILLAILVLIAWFVRSWRLALGALIGFLLVMGMRQ-WETMLQTMSLVLVS 102

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            + +++        AAKS  +  ++ PI+D MQ++P   +L   V +F     G V G  
Sbjct: 103 TLTAVIMAIPLGIWAAKSETVSKIVRPIMDFMQTMPAFVYLIPAVTFFS---IGVVPGVF 159

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              IFA+               +  +  +  E  RS+  + WQ    + +P ++P ++  
Sbjct: 160 STIIFALPPG-----VRMTELGIRQVDEETVEAGRSYGATPWQILRGIQLPLAVPTIMAG 214

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +   +       V + M+          G+G  +  AI   D+   + A L ++ +    
Sbjct: 215 INQVIMLSLSMAVIAGMV-------GADGLGKEVTAAISTLDVAQGVEAGLAVVILAVYL 267

Query: 256 DQL 258
           D+L
Sbjct: 268 DRL 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 11/237 (4%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           SN  +S  + I    +V       +W+     +  F     +        TM  V+V  +
Sbjct: 45  SNALLSIPVFILLAILVLIAWFVRSWRLALGALIGFLLVMGMRQWETMLQTMSLVLVSTL 104

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            A I+ IP+GIW      +S  ++P    +   PA V+    V+  S   +       + 
Sbjct: 105 TAVIMAIPLGIWAAKSETVSKIVRPIMDFMQTMPAFVYLIPAVTFFSIGVVPGVFSTIIF 164

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                    +     G      +  E   S+  T W+  R I LP   P  + G      
Sbjct: 165 ----ALPPGVRMTELGIRQVDEETVEAGRSYGATPWQILRGIQLPLAVPTIMAGINQVIM 220

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + + ++++ +           GLG  +  +       + V   L +    + L+R 
Sbjct: 221 LSLSMAVIAGMVG-------ADGLGKEVTAAISTLDVAQGVEAGLAVVILAVYLDRL 270


>gi|91783656|ref|YP_558862.1| sulfate ester ABC transporter inner membrane protein [Burkholderia
           xenovorans LB400]
 gi|91687610|gb|ABE30810.1| Putative ABC sulfate ester transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 283

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + D +        L +    +  R+L       L  F        SR L   ++
Sbjct: 63  LPPPERVFDTLVELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVL 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K I         I  + +  +T S  Q     
Sbjct: 123 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYI--------LIAHAALVPVTLSTLQGFQQT 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  SGWQ+  YL +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 175 PATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSE---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  + +  ++ L
Sbjct: 231 --GLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +     I++ RV++     +++   +G  +G    + + + P    L   P 
Sbjct: 74  VELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPV 133

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P ++  V            +L+       +  + + G    P    EVA  F  +G
Sbjct: 134 LGWLPFLLLLVGVG----EPLKYILIAHAALVPVTLSTLQGFQQTPATLDEVARVFEYSG 189

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+   Y+ILP   P   TG   A   AW A +V E+ +       + GLG  I    +  
Sbjct: 190 WQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLF 243

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               V+  V+++     A+NR L
Sbjct: 244 QLDLVMASVVVVGAIGYAVNRAL 266


>gi|17548288|ref|NP_521628.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430534|emb|CAD17218.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 298

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 16/236 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLF 82
           A  + + +   +  G+        +     + L            T    LS+ +ISL  
Sbjct: 46  AVPMWMMMAFFIGIGLWRVGWRFALFTAASLFLISATGFWDQTIVTLGLTLSSTIISLAL 105

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA+SR +  V+ PILD+MQ++P   +L    + F     G+V G     IFA+
Sbjct: 106 GVPLGIWAARSRVVSAVVRPILDLMQTMPAFVYLIPAAMLFGL---GRVPGILSTVIFAM 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  +  +L E   +F  +  Q  + + +P ++P ++  +  ++  
Sbjct: 163 PPA-----VRLTSLGIRQVNMELVEAGLAFGCTPRQLLYKVQIPNALPSIMQGVNQTIMM 217

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               V+ + M+  G       G+G+ +  +I+  D+     + L+++ +  + D++
Sbjct: 218 ALSMVIIASMVGAG-------GLGNEVLASIQRLDIGLGFESGLSVVLLAIILDRI 266



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 11/224 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              +      + W+   +                  +T+   +   II+  + +P+GIW 
Sbjct: 54  AFFIGIGLWRVGWRFALFTAASLFLISATGFWDQTIVTLGLTLSSTIISLALGVPLGIWA 113

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +S+ ++P   L+   PA V+            +   L   +  +           
Sbjct: 114 ARSRVVSAVVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL----T 169

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G      +  E   +F  T  +    + +P   P  + G       A +  I++ +  
Sbjct: 170 SLGIRQVNMELVEAGLAFGCTPRQLLYKVQIPNALPSIMQGVNQTIMMALSMVIIASMVG 229

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            G       GLG  +  S ++          L +    + L+R 
Sbjct: 230 AG-------GLGNEVLASIQRLDIGLGFESGLSVVLLAIILDRI 266


>gi|158314940|ref|YP_001507448.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158110345|gb|ABW12542.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 281

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 12/267 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGY 366
           ++  V  + R     R  F +  +   +      +    W   +    +   +    +  
Sbjct: 5   VATVVGSVERKQVPPRRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPAPLPV 64

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           + +         ++  G +TM  V+V   + S++ I + + I     +     PF     
Sbjct: 65  LRSLIEGLGDGSLLSNGWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQ 124

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     P++++ + +   +  L   LL    T + +L N I G  +   D  ++  + 
Sbjct: 125 TIPKIALAPIIITWMGFGEASKMLMAGLL----TLFPVLVNTITGLKSVEQDQLDLMRAL 180

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+ +RY+ LP   PY   G   +   +   +IV E            GLG  I  S
Sbjct: 181 QATEWQIFRYVRLPRALPYIFAGLEISIVFSVIGAIVGEFVG------AEAGLGYLIQAS 234

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    V  ++++    L L+R +
Sbjct: 235 QATLDATTTVAVLVVLSVMGLVLHRIV 261



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 93/256 (36%), Gaps = 22/256 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQET--------TVPRDIVDIVPITLDVHSLPQ 63
            RR      D L     + +   L H               P  ++  +   L   SL  
Sbjct: 20  RRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPAPLPVLRSLIEGLGDGSLLS 79

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               T   +L    +  L     A +  + R +     P +   Q+IP +      + + 
Sbjct: 80  NGWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWM 139

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K++ A L  +F +          +    L ++ +D  ++ R+ + + WQ F Y+
Sbjct: 140 GFGEASKMLMAGLLTLFPVLV--------NTITGLKSVEQDQLDLMRALQATEWQIFRYV 191

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +S+    F V+ +   +VG+ V    G+G  I  +    D    + 
Sbjct: 192 RLPRALPYIFAGLEISIV---FSVIGA---IVGEFVGAEAGLGYLIQASQATLDATTTVA 245

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +  +  +++
Sbjct: 246 VLVVLSVMGLVLHRIV 261


>gi|126725657|ref|ZP_01741499.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126704861|gb|EBA03952.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 342

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 98/238 (41%), Gaps = 21/238 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISL 80
            F++V  ++ I     +   V   ++    I++ +  L  +   A +T   +     IS+
Sbjct: 108 WFIMVPILVAISWFASKSKPVTIFVL----ISIMLLGLVDHYDVAMQTLSIIFVCTSISV 163

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +         +KS RL   +VPILD++Q++P   +L   +  F                 
Sbjct: 164 MLGVPVGIAMSKSDRLQRSVVPILDLLQTLPTFVYLIPLIFLFSVTESKLYG-------I 216

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           AI    +  +       +  + +D+ E + +F ++  Q+   + +P ++P ++  +  ++
Sbjct: 217 AIILYAIVPVIRLTDLGIRLVDKDVIEAANAFGMTSRQRLTGVELPLALPNIMAGINQTI 276

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + ++         PG+G  +   I+  +L   + A + ++ +  + D++
Sbjct: 277 MMSLAMVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDRV 327



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +    V        +     +++       ++    +   T+  + V   I+ +
Sbjct: 105 STPWFIMVPILVAISWFASKSKPVTIFVLISIMLLGLVDHYDVAMQTLSIIFVCTSISVM 164

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +PVGI +     +   + P   LL   P  V+    +  +  + +  +    + +I  
Sbjct: 165 LGVPVGIAMSKSDRLQRSVVPILDLLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILY 221

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A++F +T  +    + LP   P  + G       +  
Sbjct: 222 AIVPVIRLTDLGIRLVDKDVIEAANAFGMTSRQRLTGVELPLALPNIMAGINQTIMMSLA 281

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++  + +    + L+R
Sbjct: 282 MVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDR 326


>gi|291612563|ref|YP_003522720.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
 gi|291582675|gb|ADE10333.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
          Length = 325

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+SII +P+GI  G    ++   +PF +     PA  F  L V+ +  Y 
Sbjct: 131 SIQIIFWGFVISSIIGVPLGILSGTYSTMARLNEPFIEFFRYLPAPAFGALAVAVLGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +      R    +++PGI P 
Sbjct: 191 APK----ISIIVIGTLFQQILIVANTTRKLDPTIVEAALTLGTNRLRMLTRVVVPGILPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   ++++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYQHFDNVYAAIMMIGII 300

Query: 566 VLALNRF---LWHPLYLY 580
               +     L   L+ +
Sbjct: 301 GFGTDILLGKLGRRLFPW 318



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P   D+  L +    +   +    VIS +       L+     +  +  P ++
Sbjct: 109 YTAFTKEPEQKDMPWLHESLWHSIQIIFWGFVISSIIGVPLGILSGTYSTMARLNEPFIE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   +
Sbjct: 169 FFRYLPAPAFGALAVAVLGIYDAPK--------ISIIVIGTLFQQILIVANTTRKLDPTI 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   +  +    + VP  +P L  +  + +   W +++ +E+I          GI
Sbjct: 221 VEAALTLGTNRLRMLTRVVVPGILPDLYRDQRILLGWAWTYLIVAELIGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             +I    + Q    +  A++ +  + F  D L   L R +  W
Sbjct: 275 TWFITQQARYQHFDNVYAAIMMIGIIGFGTDILLGKLGRRLFPW 318


>gi|226944346|ref|YP_002799419.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
 gi|226719273|gb|ACO78444.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
          Length = 257

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 84/216 (38%), Gaps = 13/216 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +++          L +  + +  R LS   +  L    +  L   SR    ++ P
Sbjct: 39  ASPAAVLEAAWQAAVSGELWRGLAASLGRNLSGFALGSLAGLAFGGLLGLSRLAERLVGP 98

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
               ++ I +  ++     +F    P KV    LA  +         +  + ++ + +  
Sbjct: 99  TFHALKQIALFAWIPLLSAWFGFGEPAKVAFIALAVFY--------PVALNSFEGIRSTR 150

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R+L EV+R   L+  Q+   L +P + P +   + + +   W   + +E           
Sbjct: 151 RELLEVARVLGLTPTQRLLRLVLPSAAPAIFTGLHLGLIYAWLATLGAEYFFS-----AA 205

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           PGIG+ +    +  ++  ++Y +L +  V  + ++L
Sbjct: 206 PGIGNTMIDGREHFEMDQVIYGLLVVGAVGLVLNRL 241



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 9/189 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +    + S+  +  G  +G        + P    L       + PL+ +   +
Sbjct: 62  AASLGRNLSGFALGSLAGLAFGGLLGLSRLAERLVGPTFHALKQIALFAWIPLLSAWFGF 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +     + +  N   G  +   +  EVA    +T  +    ++LP   
Sbjct: 122 G----EPAKVAFIALAVFYPVALNSFEGIRSTRRELLEVARVLGLTPTQRLLRLVLPSAA 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG       AW A++ +E            G+G  + +  E     +V+ G+L++ 
Sbjct: 178 PAIFTGLHLGLIYAWLATLGAEYF-----FSAAPGIGNTMIDGREHFEMDQVIYGLLVVG 232

Query: 564 CFVLALNRF 572
              L LNR 
Sbjct: 233 AVGLVLNRL 241


>gi|26989493|ref|NP_744918.1| glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein, putative [Pseudomonas putida KT2440]
 gi|24984363|gb|AAN68382.1|AE016470_11 glycine betaine/L-proline ABC transporter, ATPase/permease fusion
           protein, putative [Pseudomonas putida KT2440]
          Length = 698

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 90/237 (37%), Gaps = 16/237 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVHSLPQYASRTTLRMLSAMVISLLF 82
                +  + ++    +       +   + +  + +    +    T   + +++++SLL 
Sbjct: 464 WIPWPVPALALVYLAWRSAGAILALTTALALGYIGLFGFWERTISTIALVGASVLLSLLI 523

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L AK      ++ P+LD+MQ++P   +L   V +F     GK        IFA+
Sbjct: 524 GIPTGILLAKRALARRLVTPLLDVMQTLPTFVYLIPAVAFFSV---GKTPAVIATVIFAL 580

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M       +  +P+   E + +   + WQ    + +P +   L+  +  ++  
Sbjct: 581 A-----PMIRLTALGIQEVPKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTIVM 635

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               VV + +I  G       G+G  +  A++       + A + ++    + D+++
Sbjct: 636 SLSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGIAIVFCALVPDRII 685



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 16/239 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V   L    + V     + +AW+S G I+   T   + Y+   G       T+  V   +
Sbjct: 458 VEGALGWIPWPVPALALVYLAWRSAGAILALTTALALGYIGLFGFWERTISTIALVGASV 517

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +++ +I IP GI +  R      + P   ++   P  V+    V+  S       +   +
Sbjct: 518 LLSLLIGIPTGILLAKRALARRLVTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVI 577

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +      ++     G    P    E A +   T W+    + LP      + G     
Sbjct: 578 FALA----PMIRLTALGIQEVPKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTI 633

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + +  +V+ +   G       GLG  +  +       E VL  + +    L  +R +
Sbjct: 634 VMSLSMVVVAALIGAG-------GLGYDVMTALRNIKGGEGVLAGIAIVFCALVPDRII 685


>gi|37676170|ref|NP_936566.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio vulnificus YJ016]
 gi|37200711|dbj|BAC96536.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio vulnificus YJ016]
          Length = 280

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           I    ++   +  +      V +  +T+      Q    T + + +A  IS+L       
Sbjct: 57  IIATALIAWFLHRSIGLVLFVVLALLTILNLGYWQEMLETFVLVFAATTISVLIGVPIGI 116

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +AA  R +  +L PILD+MQ++P   +L  T+V F     G V G     IFAI      
Sbjct: 117 MAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFAIAAP--- 170

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                 Y  +  +P +L E  ++F  +  +    + +P ++P ++  +   +      VV
Sbjct: 171 --IRLTYLGITKVPEELVEAGKAFGANRLKLLLKVELPAALPSIMAGITQCIMLSLSMVV 228

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + ++          G+G  +  A+   ++     A L ++ V  + D+L
Sbjct: 229 IAALV-------GADGLGKPVVRALNTVNIAQGFEAGLAIVLVAIILDRL 271



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
            F  ++           +     +   L  I     + F  +     +     I WF   
Sbjct: 10  PFGEWMEMGVDWLTLNAAGFFDAVAFFLESIILFVVDLFKWMPPAMPIIATALIAWFLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    R 
Sbjct: 70  SIGLVLFVVLALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPIGIMAAHRR 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            I + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WIYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F     +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELVEAGKAFGANRLKLLLKVELPAALPSIMAGITQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNIAQGFEAGLAIVLVAIILDRL 271


>gi|239624155|ref|ZP_04667186.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520541|gb|EEQ60407.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 256

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 16/249 (6%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------C 384
                 +     +       V   V     + +          Q  L ++  G       
Sbjct: 1   MKHRWKDAAAPVIGIGAVLLVWYMVCRWGIFSAYVLPPPSKVLQGFLRMLVSGELWKDIY 60

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+  RV+    IA ++   +G+     P      +   Q     P     PL++      
Sbjct: 61  ISFIRVMKGFAIAFVLAFCLGMLRALLPASGRYYEYVVQFFRNVPPLSMIPLLILWCGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                   +++++  + + +  N++ G +       EV   F  +  R +  I+LP    
Sbjct: 121 ETTK----TVIIVLASFFPMYLNIVKGFTGCDKKLLEVGDMFGYSRGRKFLRIVLPYASA 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G     G +W A I +E+ +       +TGLG  I  + +     +V++G+L++  
Sbjct: 177 DILVGMRIGLGYSWRAIIGAEMVA------ASTGLGHMILFAQQMSRTDKVIVGILVIGA 230

Query: 565 FVLALNRFL 573
              A +R  
Sbjct: 231 VGYATDRIF 239



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 91/248 (36%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +     +  + A +LV  ++    +        P  ++      L    L +    + +R
Sbjct: 6   KDAAAPVIGIGAVLLVWYMVCRWGIFSAYVLPPPSKVLQGFLRMLVSGELWKDIYISFIR 65

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++    I+ +  F    L A     G     ++   +++P L  +   +++       K 
Sbjct: 66  VMKGFAIAFVLAFCLGMLRALLPASGRYYEYVVQFFRNVPPLSMIPLLILWCGIGETTKT 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   LA+ F         M  ++ +      + L EV   F  S  +KF  + +P++   
Sbjct: 126 VIIVLASFF--------PMYLNIVKGFTGCDKKLLEVGDMFGYSRGRKFLRIVLPYASAD 177

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M + +   W  ++ +EM+          G+G  I  A +      ++  +L +  V
Sbjct: 178 ILVGMRIGLGYSWRAIIGAEMVAAST------GLGHMILFAQQMSRTDKVIVGILVIGAV 231

Query: 252 IFLYDQLL 259
            +  D++ 
Sbjct: 232 GYATDRIF 239


>gi|116254539|ref|YP_770375.1| putative glycine betaine/L-proline transport system permease
           protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259187|emb|CAK10305.1| putative glycine betaine/L-proline transport system permease
           protein [Rhizobium leguminosarum bv. viciae 3841]
          Length = 293

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           LLA  + +GI   ++  +    +   +   + + L +  +L      T   ++++ +I++
Sbjct: 42  LLAIPMPVGIAIFVILSLWRVGIGFAVFTALGLLLVNHIALWGPMMETLSLVIASTLIAM 101

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L         A+   +   + P+LD+MQ++P   +L    ++F     G V GA    IF
Sbjct: 102 LVGLPLGISMARKDSVAAFVRPVLDLMQTMPAFVYLIPAAMFFGL---GAVPGAIATVIF 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                 +  +       +  +  +  E   +F  +  Q  + + +P ++P ++  +  ++
Sbjct: 159 -----SMPPVARLTNLGIRQVDGEFIEAGNAFGCTATQLLFKVQLPNALPSIMAGINQTI 213

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI  G       GIG+ +   I+  D+       + ++ +  + D++
Sbjct: 214 MLSLSMVVIASMIGAG-------GIGNTVLTGIQRLDVGTGFEGGIAVVILAVILDRI 264



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 81/229 (35%), Gaps = 13/229 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + I  F ++    +GI +     +       + + +      T+  V+   +IA ++ +P
Sbjct: 49  VGIAIFVILSLWRVGIGFAVFTAL--GLLLVNHIALWGPMMETLSLVIASTLIAMLVGLP 106

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI +  +  +++ ++P   L+   PA V+            +   +   +     +   
Sbjct: 107 LGISMARKDSVAAFVRPVLDLMQTMPAFVYLIPAAMFFGLGAVPGAIATVIF----SMPP 162

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +      G      +F E  ++F  T  +    + LP   P  + G       + +  ++
Sbjct: 163 VARLTNLGIRQVDGEFIEAGNAFGCTATQLLFKVQLPNALPSIMAGINQTIMLSLSMVVI 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       G+G  +    ++        G + +    + L+R 
Sbjct: 223 ASMIGAG-------GIGNTVLTGIQRLDVGTGFEGGIAVVILAVILDRI 264


>gi|56709017|ref|YP_165062.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Ruegeria pomeroyi DSS-3]
 gi|56680702|gb|AAV97367.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Ruegeria pomeroyi DSS-3]
          Length = 524

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +V+ +I +    +    V           L    L + +  T   + +  ++ +L    
Sbjct: 296 PVVMLVIVVAASRLAGLRVAI-FTAASLAYLAFMGLWELSMITVALIGTGAILCILIGVP 354

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +     KSRR   +  P+LD MQ++P   +L   + +F    P  V+        A    
Sbjct: 355 FGIWFGKSRRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVL--------ATLIF 406

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P   +E + +F  S WQ  + + +P ++P ++  +  ++     
Sbjct: 407 AMPPVVRLTALGMRGVPETTKEAAIAFGCSPWQLLFNVELPLALPSIMTGINQTILMSLS 466

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I          G+G+ I  +++       L   L +L    + D++
Sbjct: 467 MVVIASLI-------GADGLGALILESLQYAAKGQGLLGGLAILLCAMVIDRI 512



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    +V   +     +   +      Y   + +  L  IT+  +    I+  +I +P
Sbjct: 295 WPVVMLVIVVAASRLAGLRVAIFTAASLAYLAFMGLWELSMITVALIGTGAILCILIGVP 354

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GIW G      +  +P    +   PA V+   +++          L   +         
Sbjct: 355 FGIWFGKSRRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIF----AMPP 410

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P   KE A +F  + W+    + LP   P  +TG       + +  ++
Sbjct: 411 VVRLTALGMRGVPETTKEAAIAFGCSPWQLLFNVELPLALPSIMTGINQTILMSLSMVVI 470

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLGA I ES +  +  + +LG L +    + ++R 
Sbjct: 471 ASLIG-------ADGLGALILESLQYAAKGQGLLGGLAILLCAMVIDRI 512


>gi|39935677|ref|NP_947953.1| aliphatic sulfonate ABC transporter permease [Rhodopseudomonas
           palustris CGA009]
 gi|39649530|emb|CAE28052.1| putative aliphatic sulfonate transport membrane component. Permease
           subunit of an ABC transporter [Rhodopseudomonas
           palustris CGA009]
          Length = 268

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 84/256 (32%), Gaps = 11/256 (4%)

Query: 316 LCRTLGVIR-FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           L  TL   R +  P     +     +  +L     C +  V+  +       IV  +   
Sbjct: 3   LVETLARPRAWRLPRPDGLIQWIVPLLIILVWQAACSLGFVSARVLPAPSDVIVAGWKLL 62

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++    ++ +R  V   I   I    G+  G     +       Q++   P     
Sbjct: 63  QSGELVRNIWVSFWRASVGFAIGGSIGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALI 122

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+  G  + I  N + G  +      E+   + ++    +
Sbjct: 123 PLVILWFGI----DEEAKLFLVALGVFFPIYLNTLHGIRSVDPQLIEMGRIYGMSNVELF 178

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +I PG  P    G   A G  W   IV+E  +       ++GLG    ++ E      
Sbjct: 179 RRVIFPGALPSVFVGVRFALGIMWLTLIVAETIA------ASSGLGYMAMQAREFMLIDV 232

Query: 555 VVLGVLIMCCFVLALN 570
           VVL +LI        +
Sbjct: 233 VVLSILIYALLGKLAD 248



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 91/253 (35%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  ++     ++     +    P D++      L    L +    +  R      I   
Sbjct: 28  LLIILVWQAACSLGFVSARVLPAPSDVIVAGWKLLQSGELVRNIWVSFWRASVGFAIGGS 87

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F +      S     +    L +++++P L  +   +++F           E A +F 
Sbjct: 88  IGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALIPLVILWFGID--------EEAKLFL 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    + ++   L E+ R + +S  + F  +  P ++P +   +  ++ 
Sbjct: 140 VALGVFFPIYLNTLHGIRSVDPQLIEMGRIYGMSNVELFRRVIFPGALPSVFVGVRFALG 199

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          G+G     A +   +  ++ ++L    +  L D   +L
Sbjct: 200 IMWLTLIVAETIAASS------GLGYMAMQAREFMLIDVVVLSILIYALLGKLADSASRL 253

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   F+
Sbjct: 254 LERQTLSWHPAFQ 266


>gi|312961054|ref|ZP_07775559.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284712|gb|EFQ63288.1| glycine betaine/L-proline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 282

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T  ++  A ++ ++       +AA        L P+LD+MQ++P   +L  T+ 
Sbjct: 89  WQETMETLAQVTFATLVCVIVGVPLGIVAAHRPWFYAALRPVLDLMQTVPTFVYLIPTLT 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  +C++P +L +  ++F  S  Q   
Sbjct: 149 LFGL---GVVPGLISTVVFAIAAP-----IRLTYLGICDVPEELMDAGKAFGCSRRQLLA 200

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 201 RIELPHAMPSIAAGITQCIMLSLSMVVIAALV-------GADGLGKPVVNALNTADIAMG 253

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ +    D++
Sbjct: 254 FEAGLAIVLLAITLDRI 270



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ +V    ++  I+ +P+GI    RP   + ++P   L+   P  V+    +  ++ + 
Sbjct: 95  TLAQVTFATLVCVIVGVPLGIVAAHRPWFYAALRPVLDLMQTVPTFVYL---IPTLTLFG 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     L   ++F     I      G    P +  +   +F  +  +    I LP   P 
Sbjct: 152 LGVVPGLISTVVFAIAAPIRL-TYLGICDVPEELMDAGKAFGCSRRQLLARIELPHAMPS 210

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       + +  +++ +           GLG  +  +             L +   
Sbjct: 211 IAAGITQCIMLSLSMVVIAALVG-------ADGLGKPVVNALNTADIAMGFEAGLAIVLL 263

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 264 AITLDRI 270


>gi|325290857|ref|YP_004267038.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966258|gb|ADY57037.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 260

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 11/198 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFP 435
             +      ++FRV+V +++A  + +P+G  +G + P ++  + P   +     A   FP
Sbjct: 57  GDLFIHTTTSLFRVLVGLLMAIGVAVPLGFILGGWFPKVTVFLHPLLNIFGQINAFSLFP 116

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + +                ++ +   W + FN I+G         +   S        + 
Sbjct: 117 IFILAFGIGET----AKLAIIFWSAIWPVFFNTISGVKNVDPLLIKSIRSMGAGKLIIFA 172

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILPG      TG       ++   I +E+         + GLG  I  S+     P +
Sbjct: 173 KVILPGAARSIFTGLQMGARTSFLMIIAAEMLG------SSAGLGWLIYNSSNNNVIPRL 226

Query: 556 VLGVLIMCCFVLALNRFL 573
            +GVL++     A+N  +
Sbjct: 227 FVGVLVIALLGYAINYLI 244



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 88/246 (35%), Gaps = 16/246 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLS 74
           F + +  + F  V      L     +   P   + +    + +   L  + + +  R+L 
Sbjct: 13  FIDYYGFILFFAVWQAGPSLGWIDPQFIPPPSDILVEAYKISITGDLFIHTTTSLFRVLV 72

Query: 75  AMVISLLFTFVYA-TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +++++         L     ++ + L P+L+I   I         ++ F          
Sbjct: 73  GLLMAIGVAVPLGFILGGWFPKVTVFLHPLLNIFGQINAFSLFPIFILAFGIG------- 125

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +  IF S +W + F+    + N+   L +  RS        F  + +P +   + 
Sbjct: 126 -ETAKLAIIFWSAIWPVFFNTISGVKNVDPLLIKSIRSMGAGKLIIFAKVILPGAARSIF 184

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + M     +  ++A+EM+          G+G  I  +     +  +   +L +  + +
Sbjct: 185 TGLQMGARTSFLMIIAAEMLGSSA------GLGWLIYNSSNNNVIPRLFVGVLVIALLGY 238

Query: 254 LYDQLL 259
             + L+
Sbjct: 239 AINYLI 244


>gi|304386427|ref|ZP_07368760.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pediococcus acidilactici DSM 20284]
 gi|304327784|gb|EFL95011.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pediococcus acidilactici DSM 20284]
          Length = 510

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 16/211 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q   +     L A+V++++     A  A + R++  +L+ I  ++Q+IP       
Sbjct: 13  SDLWQALLQHLGISLVALVLAIVIAMPLAIWATRHRKIAEILLQITGVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + AI A+    +  +  + Y  +  I   LEE + +F +   Q
Sbjct: 67  --LALLGLLIPLVGIGSVPAIIALVVYALLPIFQNTYVGITEIDPSLEEAADAFGMRPLQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +MP ++  +   +         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFRVELPTAMPVIISGIRTGLVLIIGTATLAALIGAG-------GLGNFILLGINRNDP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             IL   ++   +      LL   +  WS K
Sbjct: 178 ALILVGAISSALLAIGLSALL-NVLQRWSVK 207



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 81/217 (37%), Gaps = 13/217 (5%)

Query: 372 TYQDVLYVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           T+ +    +W   +  +   +V +++A +I +P+ IW      I+  +     +L   P+
Sbjct: 7   TFAEQKSDLWQALLQHLGISLVALVLAIVIAMPLAIWATRHRKIAEILLQITGVLQTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L++  V    +   + L +  +      I  N   G +      +E A +F +  
Sbjct: 67  LALLGLLIPLVGIGSVPAIIALVVYALL----PIFQNTYVGITEIDPSLEEAADAFGMRP 122

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P  ++G  T        + ++ +   G       GLG +I     + 
Sbjct: 123 LQKLFRVELPTAMPVIISGIRTGLVLIIGTATLAALIGAG-------GLGNFILLGINRN 175

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               +++G +      + L+  L + L  +  + + +
Sbjct: 176 DPALILVGAISSALLAIGLSALL-NVLQRWSVKKITI 211


>gi|254505697|ref|ZP_05117843.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           16]
 gi|219551350|gb|EED28329.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           16]
          Length = 280

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WEEMLETFVLVFAATTISVLVGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  +  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  I     + F  +     +     I W+   
Sbjct: 10  PLGQWMEAGVDWLTDNAAGLFDAISIFLETIILFVVDGFKWMPPAMPILMTAAIAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   ++++L    L       V     I+ ++ +P+GI    RP
Sbjct: 70  SIPLVLFIVAALLTILNLGYWEEMLETFVL-------VFAATTISVLVGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  T  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELVEAGKAFGATRMKLLFKVELPAAMPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|66048099|ref|YP_237940.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63258806|gb|AAY39902.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330970748|gb|EGH70814.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 265

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 97/253 (38%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   ++
Sbjct: 246 LERVCLRWHPAYQ 258


>gi|126178943|ref|YP_001046908.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
 gi|125861737|gb|ABN56926.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
          Length = 281

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  ++  +     +      +  ++   L + SL   A  T   +L + +++L  
Sbjct: 52  ILIVLISVLVWFVTRRDIKLAGLTALGLLLIWDLQLWSL---AMLTLALVLVSTIVALAI 108

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +      AA S  L   L PILD MQ++P   +L   V++F     G V G     +FAI
Sbjct: 109 SIPLGIAAAGSDALNAALRPILDFMQTMPSFVYLIPAVIFFG---IGNVPGTIATVVFAI 165

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  +P +L EV+ +F  +  QK   + +P ++P ++  +   +  
Sbjct: 166 PPA-----LRLTNLGIRQVPIELIEVADAFGSTPRQKLLKVQLPVALPTIMAGVNQCIML 220

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + MI          G+G  + + I+  D+     A L ++ +  + D++
Sbjct: 221 ALSMVVIASMI-------GARGLGYQVLVGIQRVDIGGGFEAGLAIVIIAIILDRI 269



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 64/176 (36%), Gaps = 11/176 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L +  L  +T+  V+V  I+A  I IP+GI       +++ ++P    +   P+ V+   
Sbjct: 85  LQLWSLAMLTLALVLVSTIVALAISIPLGIAAAGSDALNAALRPILDFMQTMPSFVYLIP 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V      ++   +   +  I       L     G    P +  EVA +F  T  +    
Sbjct: 145 AVIFFGIGNVPGTIATVVFAI----PPALRLTNLGIRQVPIELIEVADAFGSTPRQKLLK 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           + LP   P  + G       A +  +++ +           GLG  +    ++   
Sbjct: 201 VQLPVALPTIMAGVNQCIMLALSMVVIASMIG-------ARGLGYQVLVGIQRVDI 249


>gi|16077368|ref|NP_388181.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221308115|ref|ZP_03589962.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221312438|ref|ZP_03594243.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221317371|ref|ZP_03598665.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221321636|ref|ZP_03602930.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321313969|ref|YP_004206256.1| glycine betaine ABC transporter permease [Bacillus subtilis BSn5]
 gi|1171920|sp|P46921|OPUAB_BACSU RecName: Full=Glycine betaine transport system permease protein
           opuAB
 gi|984804|gb|AAC43456.1| transmembrane protein [Bacillus subtilis]
 gi|1805371|dbj|BAA08933.1| glycine betain/L-proline transmembrane protein [Bacillus subtilis]
 gi|2632585|emb|CAB12093.1| glycine betaine ABC transporter (permease) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291482686|dbj|BAI83761.1| glycine betaine ABC transporter, permease [Bacillus subtilis subsp.
           natto BEST195]
 gi|320020243|gb|ADV95229.1| glycine betaine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 282

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++        A++   +  ++ PILD+MQ++P   +L   + +F 
Sbjct: 90  MLQTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFF- 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  Q+ + + 
Sbjct: 149 --NIGVVPGVVASVIFAMP-----PTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKVQ 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + M+         PG+GS +  A+ +      + A
Sbjct: 202 LPLATKTILAGINQSIMLALSMVVIAAMV-------GAPGLGSEVYSAVTQLKTGVGVEA 254

Query: 245 MLTMLGVIFLYDQL 258
            + ++ V    D++
Sbjct: 255 GIAIVIVAITLDRI 268



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 83/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLI 394
           +   L      ++  +   +AW      +  FT    L + +LG       T+  V+  +
Sbjct: 42  IVTGLGFIPSILLTIIFAALAWWISTRGIALFTLIGFLLIDYLGYWDPMLQTLALVLTSV 101

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ +P+GIW   +  +   + P   L+   PA V+    +   +   +   +   +
Sbjct: 102 IISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVI 161

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +   + G    P D  E   +F  T  +    + LP      + G   + 
Sbjct: 162 F----AMPPTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKVQLPLATKTILAGINQSI 217

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 218 MLALSMVVIAAMVG-------APGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268


>gi|239979899|ref|ZP_04702423.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces albus J1074]
          Length = 664

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/459 (15%), Positives = 141/459 (30%), Gaps = 48/459 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  S R+  +L P+LD MQ +P   +L   V+ F 
Sbjct: 153 TMQTLALMIVAVLASVILGALLGLAAGLSDRVFRLLRPVLDTMQVLPAFAYLLPVVLVFG 212

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L      + E   S   +  Q+ +   
Sbjct: 213 IGVP--------AAVLATVIYAAPPMARLTALGLRGADAGVMEAVTSLGTTARQRLFTAR 264

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 265 LPLARKELLLGVNQTIMLALSMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 317

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF-------------RK 291
            + ++ +  + D+         +   R+          S  +                R 
Sbjct: 318 GIPIVLLAVVLDR------TTAAAGRRIGAGEAASGPVSPAVGWAVAAVATLAVALGTRF 371

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTL-------GVIRFHFPENFLQLCSNQRVSYML 344
            + L +    ++    P++  V  +   L       G            +    R     
Sbjct: 372 ASALEWPATWTYGIAEPVNRAVDWMTDHLYSGVPLIGGTADWAGHFTTWVLDPVRDGLQW 431

Query: 345 DIFWFCVVCGVAIGIA---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             +W  ++   A+      W++            VL V      T+ +V+  + +  ++ 
Sbjct: 432 LPWWGLLLIVAALAWLIGTWRTALTATLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVLG 491

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
              GI         + ++P   +    P  V+   VV+              +  +    
Sbjct: 492 FATGIAAARSNRAEAALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVV 551

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    G         E A S   T  +  R + LP
Sbjct: 552 RI----TTQGLRGVDAGALESARSLGATSSQQIRQVQLP 586



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + +I   L  +  T        +    + V  +   +  T  ++L+A+ ++L+  F    
Sbjct: 437 LLLIVAALAWLIGTWRTALTATLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVLGFATGI 496

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA+S R    L P+LD+ Q++P   +L   V  F       V  A + A+ A+      
Sbjct: 497 AAARSNRAEAALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI--- 553

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                  Q L  +     E +RS   +  Q+   + +P +   L+  +   +      V+
Sbjct: 554 -----TTQGLRGVDAGALESARSLGATSSQQIRQVQLPLARSSLLLAVNQGVVLVLAVVI 608

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              ++  G            +   + + DL   L A   ++ +  + D++
Sbjct: 609 IGGLVGGGALGYD-------VVFGLAQGDLAVGLVAGAAIVCLGLMLDRV 651


>gi|325519245|gb|EGC98697.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 158

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 7/165 (4%)

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
            +++L A+ + ++ M  VI  YDQLLFRP+I W++KFR+E T       SW+L L R+T 
Sbjct: 1   ADKNLGAVGWVIVAMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTR 60

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +  +   +  FF+  +    +L  + G +RF  P+        ++ S  +DI W  +V 
Sbjct: 61  LIHQLLVPAGWFFAKAARIPLRLPLS-GAMRFTLPK------VEKKASRTVDIVWATLVL 113

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
                I W+   ++    T  +V +V+ LG IT+ RVVVLI IAS
Sbjct: 114 IGTAYIVWRVFSFVSTGVTMAEVGHVLVLGLITLLRVVVLIAIAS 158


>gi|126650095|ref|ZP_01722328.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus sp.
           B14905]
 gi|169827315|ref|YP_001697473.1| glycine betaine transport system permease [Lysinibacillus
           sphaericus C3-41]
 gi|126593267|gb|EAZ87229.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus sp.
           B14905]
 gi|168991803|gb|ACA39343.1| Glycine betaine transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 284

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 15/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L++ ++    +   +         I  + +    L      TT  ++ + +IS++  
Sbjct: 55  AIILILLVVVFAFYATGKKFGLASFSLIGLLFIYNQGLWTNLMETTTLVIFSSIISIIIG 114

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L +KS     ++ PILD MQ++P   +L   V +F     G V G   + IFA  
Sbjct: 115 IPLGILMSKSTIAESIIKPILDFMQTMPGFVYLIPAVAFFG---IGIVPGVFASVIFA-- 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +  +P++L E + S+  +  QK + + +P +   ++  +  ++   
Sbjct: 170 ---LPPTVRMTNLGIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLS 226

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + MI         PG+G  +  A++   +     A L ++    + D+L
Sbjct: 227 LSMVVIASMI-------GAPGLGREVLTALQRTQVGNGFVAGLGLVIFAIIIDRL 274



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 93/283 (32%), Gaps = 17/283 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
            F+        +P   +      +     F+  + F +L  NQ    +  I    ++  V
Sbjct: 3   NFLDNIPTIPLAPWVESAMDWLTSNFSAFFNSIQQFGKLLMNQVTDLLNSIPAIILILLV 62

Query: 356 AIGIAWQS-IGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIG 409
            +   + +   + +  F+   +L++   G       T   V+   II+ II IP+GI + 
Sbjct: 63  VVFAFYATGKKFGLASFSLIGLLFIYNQGLWTNLMETTTLVIFSSIISIIIGIPLGILMS 122

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                 S I+P    +   P  V+    V+      +       +          +    
Sbjct: 123 KSTIAESIIKPILDFMQTMPGFVYLIPAVAFFGIGIVPGVFASVIF----ALPPTVRMTN 178

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E A S+  T  +    + +P      + G       + +  +++ +   
Sbjct: 179 LGIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLSLSMVVIASMIG- 237

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   GLG  +  + ++       +  L +  F + ++R 
Sbjct: 238 ------APGLGREVLTALQRTQVGNGFVAGLGLVIFAIIIDRL 274


>gi|257065395|ref|YP_003145067.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256793048|gb|ACV23718.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 253

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M  ++  +II  ++ + +GI +G        I P    ++  PA +  P  +  +  + 
Sbjct: 63  SMAILIPSLIIGCLVALGLGIPMGLYGRFRKTIYPLIYAISVIPAILLSPFALHMMPSFF 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+++G+ W  LF+ + G       + + A +  +TG++   ++ILP   P 
Sbjct: 123 S----ASIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPS 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G +T+  GA+     +E+      +    G+G ++  + + G F  +  G + M   
Sbjct: 179 IMSGMVTSLRGAFLMLCFAEM------YGSQYGMGYFVKRNADMGLFDNMWAGFIFMTIV 232

Query: 566 VLALNRFL 573
           ++ + +  
Sbjct: 233 LVIIMQLF 240



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 87/245 (35%), Gaps = 17/245 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +      +V+  +      +        P        IT ++  L      +   ++ ++
Sbjct: 12  WITAVLFVVLAALYTHATNVGALDPVLFPTVEKIGNAITGNIDLLAPNFVSSMAILIPSL 71

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I  L             R    + P++  +  IP +    F +          +     
Sbjct: 72  IIGCLVALGLGIPMGLYGRFRKTIYPLIYAISVIPAILLSPFAL--------HMMPSFFS 123

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+IF I    +W   FS    +  I +   + + + +L+G+++  ++ +P +MP ++  M
Sbjct: 124 ASIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPSIMSGM 183

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           + S+ G +  +  +EM           G+G ++           +    + M  V+ +  
Sbjct: 184 VTSLRGAFLMLCFAEMYG------SQYGMGYFVKRNADMGLFDNMWAGFIFMTIVLVIIM 237

Query: 257 QLLFR 261
           QL  +
Sbjct: 238 QLFEQ 242


>gi|325677667|ref|ZP_08157319.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324110635|gb|EGC04799.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 306

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V      D+  ++    ++M  +    I+A I  IP+G+++G+   +    +  A  L 
Sbjct: 98  VVTKQFVSDLPRLMNDLAVSMITITTGYILALITAIPIGLFLGWNAQVGKVGEQIANFLG 157

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P  VF P  ++ +  +          ++     + IL   ++G         E A  F
Sbjct: 158 SIPPIVFIPYTLALLPTF----KSCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIF 213

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +       ++LP   P    G       ++     +E+          +G+G YI   
Sbjct: 214 CPSKPYMLYSVLLPASLPQIFDGCNMGLLLSFILLTSAEMIGG------NSGIGFYIQYY 267

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
           T  G+F  +++G++ +   V  +   +
Sbjct: 268 TNFGNFTRIMVGIVFLGTIVTLVTNLV 294



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 91/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + +F+ +  ++      I +       V       D+  L    + + + + +  +++L+
Sbjct: 71  IFSFIGIWTLLTAKFVLIPQDIFKAPDVVTKQFVSDLPRLMNDLAVSMITITTGYILALI 130

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      + ++G V   I + + SIP + F+ +T+              +  +IF 
Sbjct: 131 TAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALL--------PTFKSCSIFV 182

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF +  + +       + NI +   E ++ F  S     + + +P S+P +     M + 
Sbjct: 183 IFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKPYMLYSVLLPASLPQIFDGCNMGLL 242

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +  + ++EMI          GIG YI       +   I+  ++ +  ++ L   L+
Sbjct: 243 LSFILLTSAEMIGGNS------GIGFYIQYYTNFGNFTRIMVGIVFLGTIVTLVTNLV 294


>gi|254563041|ref|YP_003070136.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254270319|emb|CAX26315.1| ABC transporter, permease [Methylobacterium extorquens DM4]
          Length = 353

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     I+S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y 
Sbjct: 161 SIQIIFWGFTISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD 220

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      R  R +I+P + P 
Sbjct: 221 GPK----IAIIVIGTFFQQVLVIANTTRRVDPLLIEAALTMGSRNLRLIRRVIVPAVLPQ 276

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   +L++   
Sbjct: 277 IYRDQRILLGWAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLV 330

Query: 566 VLALNR---FLWHPLYLYGT 582
            +A +     L   L+ Y  
Sbjct: 331 GIATDIALALLGRRLFPYAR 350



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +   P   D   LP     +   +     IS L       L      +  +  P+++ ++
Sbjct: 142 LTAPPPQRDTIWLPASLWHSIQIIFWGFTISSLVGVPLGILCGAQPTIARLTEPVIEFVR 201

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            +P   F    V         K        I  I     +     +  +   +   L E 
Sbjct: 202 YLPAPAFGALMVAILGIYDGPK--------IAIIVIGTFFQQVLVIANTTRRVDPLLIEA 253

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + +      +    + VP  +P +  +  + +   W +++ +E+I          GI  +
Sbjct: 254 ALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLGWAWTYLIVAELIGTSS------GITFF 307

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           I    + Q    +  A+L +  V    D    LL R +  ++
Sbjct: 308 ITQQARYQHFDNVYAAILVIGLVGIATDIALALLGRRLFPYA 349


>gi|332557611|ref|ZP_08411933.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|332275323|gb|EGJ20638.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 284

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N+ D    +LVI I+  L   +Q       +V      +          ++   +L A V
Sbjct: 53  NVLDAAPPLLVIAILAALAWVLQRNWRVTALVVAGFAFILNQGYWDETMQSLTLILLACV 112

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +         AA   RL   + P+LD+MQ++P   +L   +V+F     G V G    
Sbjct: 113 TCMAIGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGL---GMVPGLIAT 169

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +            +  + + P  L+E + +F  +  Q+ W + +P++ P ++  + 
Sbjct: 170 VIFVLPAP-----IRLTHLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLN 224

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + ++          G+G  +  A+   +      +   ++ V  + D+
Sbjct: 225 QTIMLSLSMVVIAALVGAN-------GLGVPVVRALNTVNTALGFESGFIIVVVAIVLDR 277

Query: 258 LL 259
           +L
Sbjct: 278 ML 279



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  L +          +   W+    +V  F +            ++  +++  +    
Sbjct: 57  AAPPLLVIAILAALAWVLQRNWRVTALVVAGFAFILNQGYWDETMQSLTLILLACVTCMA 116

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 117 IGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLIATVIFVLPA 176

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P   KE A++F  T  +    + LP  FP  +TG       + +
Sbjct: 177 ---PIRL-THLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +    +         I+    + L+R L
Sbjct: 233 MVVIAALVG-------ANGLGVPVVRALNTVNTALGFESGFIIVVVAIVLDRML 279


>gi|325916164|ref|ZP_08178448.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325537584|gb|EGD09296.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 490

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             +         +  L  +       +  ++ ++LL       LAA+  RLG V++ +  
Sbjct: 274 LGVAATAHADSRIGRLLGHTREHLALVGISLGLALLIALPLGVLAARRPRLGQVVLSLTG 333

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++Q++P L    F +  F              AI A+F   +  +  + +  L +IPR+L
Sbjct: 334 VLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLPIVRNTHAGLTSIPREL 385

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + + +  L  W + W + +P +   +V  +  +       V+      +G  +I   G 
Sbjct: 386 RQTAEAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVINVGTATLG-ALIGAGGY 438

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           G  I   I+  D+  IL   +    V+ L  Q  F  +  W+
Sbjct: 439 GQPILTGIRLDDIGLILEGAIP-AAVLALLVQAAFEGLERWA 479



 Score = 71.1 bits (173), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 4/176 (2%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +A Q +G          +  ++      +  V + + +A +I +P+G+    RP +  
Sbjct: 267 AAVAAQWLGVAATAHADSRIGRLLGHTREHLALVGISLGLALLIALPLGVLAARRPRLGQ 326

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +     +L   P+   F  ++                 +   +   I+ N  AG ++ P
Sbjct: 327 VVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTHAGLTSIP 382

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            + ++ A +  +  W     + LP      V G  TA       + +  +   G  
Sbjct: 383 RELRQTAEAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGAGGY 438


>gi|296159222|ref|ZP_06842048.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890481|gb|EFG70273.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 283

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + D +        L +    +  R+L       L  F        SR L   ++
Sbjct: 63  LPPPERVFDTLVELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVL 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K I         I  + +  +T S  Q     
Sbjct: 123 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYI--------LIAHAALVPVTLSTLQGFRQT 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  SGWQ+  YL +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 175 PATLDEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVVVELVASSE---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  + +  ++ L
Sbjct: 231 --GLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +     I++ RV++     +++   +G  +G    + + + P    L   P 
Sbjct: 74  VELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPV 133

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P ++  V            +L+       +  + + G    P    EVA  F  +G
Sbjct: 134 LGWLPFLLLLVGVG----EPLKYILIAHAALVPVTLSTLQGFRQTPATLDEVARVFEYSG 189

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+   Y++LP   P   TG   A   AW A +V E+ +       + GLG  I    +  
Sbjct: 190 WQRIVYLVLPAAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLF 243

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               V+  V+++     A+NR L
Sbjct: 244 QLDLVMASVVVVGAIGYAVNRAL 266


>gi|289642223|ref|ZP_06474373.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
 gi|289507957|gb|EFD28906.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
          Length = 307

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 17/264 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
              R   P    +      +  +  I  W        +   W  +    +     ++   
Sbjct: 50  AARRRGVPRWVRRPVGPLLLLLLWQIASWRGSTSTELLASPWTVVTTFTDLVGSGELPTA 109

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           I    +++ R    +++   + I + +  G        I    Q++   P     PL + 
Sbjct: 110 I---AVSLRRAGAGVLLGGSVGILLALLAGLSRLGEDLIDASVQMIRTVPFVGLIPLFII 166

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          L+ FG  + +  N  AG     ++  E A +  +T     R++IL
Sbjct: 167 WFGIGETPK----IALVAFGVAFPLYINTYAGIRNVDSNLVEAARTVGLTRLGLIRHVIL 222

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P  + G   +   +W A I +E  +         GLG  + ++ E      +V+ +
Sbjct: 223 PGALPNVLVGLRFSLAISWLALIFAEQIN------ANQGLGQLMNDAQEFQRTDIIVVCL 276

Query: 560 LI---MCCFVLALNRFLWHPLYLY 580
           ++   +   V A+ R L   L  +
Sbjct: 277 VVYAFLGLTVDAIVRLLERGLLSW 300



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 93/233 (39%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    LP   + +  R  + +++      + A LA  SR    ++ 
Sbjct: 87  LASPWTVVTTFTDLVGSGELPTAIAVSLRRAGAGVLLGGSVGILLALLAGLSRLGEDLID 146

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++F      K        I  +     + +  + Y  + N+
Sbjct: 147 ASVQMIRTVPFVGLIPLFIIWFGIGETPK--------IALVAFGVAFPLYINTYAGIRNV 198

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E +R+  L+      ++ +P ++P ++  +  S++  W  ++ +E I        
Sbjct: 199 DSNLVEAARTVGLTRLGLIRHVILPGALPNVLVGLRFSLAISWLALIFAEQINANQ---- 254

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G  +  A + Q    I+  ++    +    D   +LL R ++ W   F 
Sbjct: 255 --GLGQLMNDAQEFQRTDIIVVCLVVYAFLGLTVDAIVRLLERGLLSWRPAFS 305


>gi|256375370|ref|YP_003099030.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255919673|gb|ACU35184.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 319

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 91/287 (31%), Gaps = 12/287 (4%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +S    + L+     L      I    P  + +L        +       V   +   
Sbjct: 26  APASTARSADLAAVGAGLDALDTPIGERPPSVWRRLARTALPPLVAFALLLVVWQALWAA 85

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRP 412
             W           +  V   +  G        ++ R V+  + A +I  P+G+ I    
Sbjct: 86  ALWPEYRLPSPLSVWGAVAEAVRTGRAAEVLWTSVHRAVLGFLAAVVIATPLGLLIAKVR 145

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + I      L + P+  + P  +             +  +++ G+   I   ++AG 
Sbjct: 146 LVRAAIGSLLSGLQSLPSVAWVPAGILWFGATPST----IYFVVLMGSVPSIANGLVAGV 201

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P     V  +         R+I+LP   P Y+ G       +W + + +E+ +    
Sbjct: 202 DQVPPLLPRVGQALGAGRLASARHILLPAALPGYLAGLKQGWAFSWRSLMAAEIIATSPQ 261

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
                GLG Y+           V+  + ++    + +   L+ PL  
Sbjct: 262 LGE--GLGQYLHNGASLNDISMVIAAIFLILLVGVGIELLLFRPLER 306



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 96/257 (37%), Gaps = 11/257 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            ++R   P +      ++V   +    L        P  +   V   +      +    +
Sbjct: 60  RLARTALPPLVAFALLLVVWQALWAAALWPEYRLPSPLSVWGAVAEAVRTGRAAEVLWTS 119

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +   + +++       L AK R +   +  +L  +QS+P + ++   +++F     
Sbjct: 120 VHRAVLGFLAAVVIATPLGLLIAKVRLVRAAIGSLLSGLQSLPSVAWVPAGILWFGA--- 176

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                      F +    V ++   +   +  +P  L  V ++          ++ +P +
Sbjct: 177 -----TPSTIYFVVLMGSVPSIANGLVAGVDQVPPLLPRVGQALGAGRLASARHILLPAA 231

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PG +  +    +  W  ++A+E+I     +    G+G Y+       D+  ++ A+  +
Sbjct: 232 LPGYLAGLKQGWAFSWRSLMAAEIIATSPQLGE--GLGQYLHNGASLNDISMVIAAIFLI 289

Query: 249 LGVIFLYDQLLFRPMIV 265
           L V    + LLFRP+  
Sbjct: 290 LLVGVGIELLLFRPLER 306


>gi|258406392|ref|YP_003199134.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257798619|gb|ACV69556.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 279

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 93/235 (39%), Gaps = 16/235 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
             +  I+   L           +  ++ + L  +  L      T   +L A  I+++   
Sbjct: 49  PWLFIILAAALAWWLSKRRGIGLFTVLGLGLVWNMGLWDPTLSTIALVLVATAIAVMIGV 108

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA ++    V+ PILD MQ++P   +L   + +F           ++AAIF+   
Sbjct: 109 PLGIFAALNQTFFRVVTPILDFMQTMPAFVYLIPAIPFFGLG--------KVAAIFSTVI 160

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +          +  +P +L E + +F  +  QK + L +P + P ++  +  ++    
Sbjct: 161 FAMPPSIRLTSLGIRQVPGELVEAADAFGSTKSQKLFKLQLPLATPTILAGVNQTIMLAL 220

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + MI          G+G  +  AI+  +      A + ++ V  + D+++
Sbjct: 221 SMVVIAAMI-------GAKGLGGEVWKAIQRLEPGRGFEAGIGIVIVAIILDRIM 268



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 74/238 (31%), Gaps = 13/238 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIA 397
           +  +    +  +   +A  ++ +    +        V  +        T+  V+V   IA
Sbjct: 44  MGLLPPWLFIILAAALAWWLSKRRGIGLFTVLGLGLVWNMGLWDPTLSTIALVLVATAIA 103

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GI+          + P    +   PA V+    +           +      +
Sbjct: 104 VMIGVPLGIFAALNQTFFRVVTPILDFMQTMPAFVYLIPAIPFFGLG----KVAAIFSTV 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +     G    P +  E A +F  T  +    + LP   P  + G       A
Sbjct: 160 IFAMPPSIRLTSLGIRQVPGELVEAADAFGSTKSQKLFKLQLPLATPTILAGVNQTIMLA 219

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +  +++ +           GLG  + ++ ++          + +    + L+R +  
Sbjct: 220 LSMVVIAAMIG-------AKGLGGEVWKAIQRLEPGRGFEAGIGIVIVAIILDRIMQQ 270


>gi|152968359|ref|YP_001364143.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151362876|gb|ABS05879.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 279

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 18/257 (7%)

Query: 18  NIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
                LA VLV  ++  L     +    P  ++      +   SLP   + + LR+L+  
Sbjct: 34  PWLSTLAVVLVWQVLAALGALDPRTLPGPVALLRTAAGMVADGSLPHALAVSLLRVLAGS 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + +    V   LA  SR    VL     ++++IP        +++F      KV    +
Sbjct: 94  ALGIGLGLVAGVLAGFSRIAEDVLDRPFQMVRTIPFTALTPLFILWFGLGEAPKVALVAV 153

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A +  ++         + +  + ++ R L EV+R +RLS  Q    + +P ++P ++  +
Sbjct: 154 ATVVPVY--------LNTFGGVRDVDRRLVEVARVYRLSNAQTARRVLLPGALPQVLVGL 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++  GW  V+ +E +          GIG  +  A        ++  +     +  L D
Sbjct: 206 RFALGVGWVAVIIAETVNASA------GIGFLLTNARSYARTDVVVVCIAVYALLGLLTD 259

Query: 257 ---QLLFRPMIVWSNKF 270
              +LL   ++ W   F
Sbjct: 260 AAVRLLEVRLLRWRAAF 276



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 86/282 (30%), Gaps = 20/282 (7%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS----- 363
           ++N         G      P    +    +R+   L      +V  V   +         
Sbjct: 1   MANATAGTTSPDGPASAPPPPPAARRSPRERLRPWLSTLAVVLVWQVLAALGALDPRTLP 60

Query: 364 --IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +  +           +     +++ RV+    +   + +  G+  GF       +   
Sbjct: 61  GPVALLRTAAGMVADGSLPHALAVSLLRVLAGSALGIGLGLVAGVLAGFSRIAEDVLDRP 120

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q++   P     PL +             +++  +         N   G         E
Sbjct: 121 FQMVRTIPFTALTPLFILWFGLGEAPKVALVAVATVVPV----YLNTFGGVRDVDRRLVE 176

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA  + ++  +  R ++LPG  P  + G   A G  W A I++E  +       + G+G 
Sbjct: 177 VARVYRLSNAQTARRVLLPGALPQVLVGLRFALGVGWVAVIIAETVN------ASAGIGF 230

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            +  +        VV+ + +     L  +   R L   L  +
Sbjct: 231 LLTNARSYARTDVVVVCIAVYALLGLLTDAAVRLLEVRLLRW 272


>gi|330814338|ref|YP_004358577.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487433|gb|AEA81838.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Candidatus Pelagibacter sp. IMCC9063]
          Length = 278

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 94/240 (39%), Gaps = 16/240 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+L+   +VI                      + I +D+  + +    T   +++A++ 
Sbjct: 50  FFNLVPLPIVIFFFAYFAFRTNGIKFSIFTFCSL-IFIDLVDVWEETMTTMAMIITAVLF 108

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +        A++S     +L PILD+MQ+IP   +L   V+ F       VI      
Sbjct: 109 CSVIGIPIGIAASRSNLFEKILRPILDVMQTIPSFVYLIPVVMLFGIGITPGVI------ 162

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             AI    +  +       L  + +  ++ +R+   + WQ  + + +P ++  ++  +  
Sbjct: 163 --AIIIFSIAPVIRLTNLGLRQVEKRFKDAARALGCNKWQVLYKIELPLALKTIMAGVNQ 220

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++       V + +I  G       G+G  + + +   D+   L   + ++ +  ++D++
Sbjct: 221 TLMLSLSMAVIAALIGAG-------GLGLTVYVGLGRLDIGQALVGGIGIVLIAIIFDRI 273



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 13/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V   + IF+F        GI +    +      + D++ V      TM  ++  ++  S+
Sbjct: 54  VPLPIVIFFFAYFAFRTNGIKFSIFTFC--SLIFIDLVDVWEETMTTMAMIITAVLFCSV 111

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI           ++P   ++   P+ V+   VV           + + +  I  
Sbjct: 112 IGIPIGIAASRSNLFEKILRPILDVMQTIPSFVYLIPVVMLFGIGITPGVIAIIIFSIA- 170

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G       FK+ A +     W+    I LP      + G       + +
Sbjct: 171 ---PVIRLTNLGLRQVEKRFKDAARALGCNKWQVLYKIELPLALKTIMAGVNQTLMLSLS 227

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            ++++ +   G       GLG  +     +    + ++G + +    +  +R 
Sbjct: 228 MAVIAALIGAG-------GLGLTVYVGLGRLDIGQALVGGIGIVLIAIIFDRI 273


>gi|300088671|ref|YP_003759193.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299528404|gb|ADJ26872.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 267

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 13/259 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITM 387
                         ++ ++W  V  GV     + + G + +  F+      +      T 
Sbjct: 15  PRLRLPIGLVLPLLLIGLWWAGVAGGVLREHFFSTPGAVFDTLFSLAADGTLATEFRDTF 74

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R++    I     + +G   G+   +   + P  Q L A PA  + P ++  +      
Sbjct: 75  QRLLAGAGIGFTTGMLLGGLTGYTRWVEKILDPTVQGLRAVPAVAWIPFLILTLGIADAP 134

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +++ + F        N  AG  +      E+A ++ ++     R II+P   P   
Sbjct: 135 KIAMIAIAIFFTA----YVNTFAGVRSTDQKLIELARAYRLSRAVVIRRIIIPSAKPQIF 190

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   A G AW  ++ SE+       +  +GLG  + +    G   + +  +L++     
Sbjct: 191 VGLRLAAGIAWIVAVFSEIL------IGNSGLGVLLNDGRTLGRPDQTIALMLVLATAGK 244

Query: 568 ALNRFLWHPLYLYGTRCLR 586
             +  +   L        R
Sbjct: 245 LTDGLI--RLAELRATRWR 261



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 84/231 (36%), Gaps = 14/231 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
              +   +      + P  + D +       +L      T  R+L+   I      +   
Sbjct: 34  WAGVAGGVLREHFFSTPGAVFDTLFSLAADGTLATEFRDTFQRLLAGAGIGFTTGMLLGG 93

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   +R +  +L P +  ++++P + ++ F ++        K+    +A  F  +     
Sbjct: 94  LTGYTRWVEKILDPTVQGLRAVPAVAWIPFLILTLGIADAPKIAMIAIAIFFTAYV---- 149

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
               + +  + +  + L E++R++RLS       + +P + P +   + ++    W   V
Sbjct: 150 ----NTFAGVRSTDQKLIELARAYRLSRAVVIRRIIIPSAKPQIFVGLRLAAGIAWIVAV 205

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            SE+++         G+G  +            +  ML +     L D L+
Sbjct: 206 FSEILIGNS------GLGVLLNDGRTLGRPDQTIALMLVLATAGKLTDGLI 250


>gi|254519610|ref|ZP_05131666.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
 gi|226913359|gb|EEH98560.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
          Length = 248

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 73/195 (37%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            I+    +M+R++  I+I+ II IPVGI +G    +   I P   LL   P   F P+ +
Sbjct: 53  FIYHILYSMYRILGAILISLIIGIPVGIALGLSSLVDKIISPVVYLLYPIPKIAFLPIFM 112

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +      +LM+    + IL            D    A     +       ++
Sbjct: 113 VMFGIGDKSK----IILMVTIIVFQILIVTRDAVKEIDKDVLISARVMKFSKSDTILKVV 168

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P I P   +    + G A +A   SE       +    G+G YI  S     +  +  G
Sbjct: 169 MPAIAPKVFSALRVSIGIAISALFFSE------NYATKYGIGYYIMNSWSMVDYKGMFAG 222

Query: 559 VLIMCCFVLALNRFL 573
           VL +    L + + +
Sbjct: 223 VLALSIMSLIIFKII 237



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 93/250 (37%), Gaps = 18/250 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVIS 79
            L   ++V+ +  +L   I    VP     I   I L  +    +   +  R+L A++IS
Sbjct: 12  GLYGVIIVVALWYLLSMLIGTNMVPSPKTTIYELIRLLQNDFIYHILYSMYRILGAILIS 71

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+           S  +  ++ P++ ++  IP + FL   +V F           + + I
Sbjct: 72  LIIGIPVGIALGLSSLVDKIISPVVYLLYPIPKIAFLPIFMVMFGIG--------DKSKI 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + T  V+ +      ++  I +D+   +R  + S       + +P   P +   + +S
Sbjct: 124 ILMVTIIVFQILIVTRDAVKEIDKDVLISARVMKFSKSDTILKVVMPAIAPKVFSALRVS 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYD 256
           +      +  SE            GIG YI  +    D   +   +L    M  +IF   
Sbjct: 184 IGIAISALFFSE------NYATKYGIGYYIMNSWSMVDYKGMFAGVLALSIMSLIIFKII 237

Query: 257 QLLFRPMIVW 266
            LL + +  W
Sbjct: 238 DLLEKKICPW 247


>gi|307946907|ref|ZP_07662242.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307770571|gb|EFO29797.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 257

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ +   + + + I VG+ IG    + + + P    +   P     PL
Sbjct: 59  GQLTLNLLPSLSRLAIGAALGASLGIGVGLLIGLFSFVRAGLVPLIAAIFPIPKIALLPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V        +       L+ FGT    +                +  SF +T +   R 
Sbjct: 119 FVIWFGIDEGSK----YALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFGLTWFSIVRK 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LPG  P  ++G   +   A    + +E+           G+GAYI ++        + 
Sbjct: 175 IVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEYGIGAYILQAGSLYDLDRLF 228

Query: 557 LGVLIMCCFVLALNRFLWH 575
            GV+I+    + ++  +  
Sbjct: 229 AGVVILSVLGVLVSSAVGR 247



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +        L      +  R+     +          L      +   LV
Sbjct: 42  LPKPSDVIQTLIEFYKSGQLTLNLLPSLSRLAIGAALGASLGIGVGLLIGLFSFVRAGLV 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F      K           I          + Y ++ N+
Sbjct: 102 PLIAAIFPIPKIALLPLFVIWFGIDEGSKYA--------LIAFGTFTPTVVATYGAVDNV 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF L+ +     + +P +MPG++  + +S++     +VA+EM+        
Sbjct: 154 DRTLIRMGQSFGLTWFSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------A 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG+YI  A    DL  +   ++ +  +  L    + R
Sbjct: 208 EYGIGAYILQAGSLYDLDRLFAGVVILSVLGVLVSSAVGR 247


>gi|50954648|ref|YP_061936.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
 gi|50951130|gb|AAT88831.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
          Length = 571

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P  + ++    ++G+          TT    ++  V            A  T   +L + 
Sbjct: 49  PPFWGVILLFAILGVWLRGSVFGAGTTARLLLIASVGQ-------WANAMDTLALVLVSA 101

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             ++  +     LAA+S+    ++ P+LD+MQ++    +L   ++ F     G V G   
Sbjct: 102 AAAIALSLPLGILAARSKTASAIIRPVLDLMQTMSAFVYLIPALILFR---IGVVPGMVA 158

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +FA+               +  +  +L E  R+F  S  +    + +P ++P ++  +
Sbjct: 159 TIVFAMAPG-----VRLTELGIRGVDHELVEAGRAFGSSPSRILRQIQLPLALPSILAGV 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              +      VV + M+  G       G+G  I  A+   D+     A + ++ +  + D
Sbjct: 214 NQVIMLSLSMVVIAGMVGAG-------GLGRDIVQALSRVDVGLGFEAGVAVVILAIVLD 266

Query: 257 QL 258
           +L
Sbjct: 267 RL 268



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 11/168 (6%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI        S+ I+P   L+    A V+    +       +   +   +  +       
Sbjct: 112 GILAARSKTASAIIRPVLDLMQTMSAFVYLIPALILFRIGVVPGMVATIVFAMAPGVRL- 170

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                 G     ++  E   +F  +  R  R I LP   P  + G       + +  +++
Sbjct: 171 ---TELGIRGVDHELVEAGRAFGSSPSRILRQIQLPLALPSILAGVNQVIMLSLSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  I ++  +          + +    + L+R 
Sbjct: 228 GMVGAG-------GLGRDIVQALSRVDVGLGFEAGVAVVILAIVLDRL 268


>gi|288560207|ref|YP_003423693.1| bicarbonate ABC transporter permease protein BtcB
           [Methanobrevibacter ruminantium M1]
 gi|288542917|gb|ADC46801.1| bicarbonate ABC transporter permease protein BtcB
           [Methanobrevibacter ruminantium M1]
          Length = 247

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 13/209 (6%)

Query: 343 MLDIFWFCVVCG---VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +L I W+ +  G   +   I    +      +T      +      T+ +V   II+AS+
Sbjct: 15  ILLIIWYLITDGLHLIPYYILPSPLNVFNAAWTLITNGKLFMHTSSTLIKVFSGIILASV 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI +G+   +         +L   P   + P  +        +       ++  G
Sbjct: 75  VAIPLGIILGWYETLDRLSSLIISILRPIPPISWIPFSILWFGIGLSS----AVFVIFIG 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L   I G     N   E A +     W     I+LP   PY V+G       A  
Sbjct: 131 CVFSVLVYTIDGVKRTDNVLIEAAQTLGANNWDILLKIVLPSTLPYIVSGLKVGVSIALM 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            ++ +E+ +       + GLG  I  +++
Sbjct: 191 CTVSAEMIA------SSRGLGYMILTASQ 213



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 100/242 (41%), Gaps = 17/242 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I P I  ++ +++  G+  I  +       P ++ +     +    L  + S T +++ S
Sbjct: 11  ILPAILLIIWYLITDGLHLIPYYI---LPSPLNVFNAAWTLITNGKLFMHTSSTLIKVFS 67

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +       +      L  +   I+ I++ IP + ++ F++++F           
Sbjct: 68  GIILASVVAIPLGIILGWYETLDRLSSLIISILRPIPPISWIPFSILWFGIGL------- 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +A+F IF   V+++       +      L E +++   + W     + +P ++P +V 
Sbjct: 121 -SSAVFVIFIGCVFSVLVYTIDGVKRTDNVLIEAAQTLGANNWDILLKIVLPSTLPYIVS 179

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + + +S      V++EMI          G+G  I  A +      ++  M+ +  +  L
Sbjct: 180 GLKVGVSIALMCTVSAEMIASS------RGLGYMILTASQLFQPGTVVVGMIVIGIIGIL 233

Query: 255 YD 256
           +D
Sbjct: 234 FD 235


>gi|170692256|ref|ZP_02883419.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142686|gb|EDT10851.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 288

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 96/274 (35%), Gaps = 19/274 (6%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G      F P   +     R +G     +    L L + +  +    +     V    + 
Sbjct: 13  GAQGGAAFRPALRSAFGSLRQVGASLAPWVAPLLILLAWEAAARSGVL--STRVLPEPLA 70

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +   +   I +   + DV        ++ +R V    I   I + +G+  G    I   +
Sbjct: 71  VVKAAWSLIQSGEMWADVK-------VSTWRAVSGFAIGGGIGLVLGLATGLFKPIEIAL 123

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
               Q++   PA    PLV+                L+  G  + I  N   G  +  ++
Sbjct: 124 DSTVQMIRNIPALAMIPLVILWFGIE----EQAKVFLVALGVFFPIYVNTFHGIRSVDSN 179

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+A S+ + G   +R++ILPG  P  + G   A G  W   IV+E  S        +G
Sbjct: 180 LIEMARSYGVKGVALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------AQSG 233

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +G     + E      VV+G+L+        +  
Sbjct: 234 IGYMTMNAREFLQTDVVVVGILLYAALGKIADVL 267



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 96/260 (36%), Gaps = 17/260 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +  LL  +         +   +    P  +V      +    +      +T R +S
Sbjct: 38  LAPWVAPLLILLAWEAAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADVKVSTWRAVS 97

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I      V        + + + L   + ++++IP L  +   +++F           
Sbjct: 98  GFAIGGGIGLVLGLATGLFKPIEIALDSTVQMIRNIPALAMIPLVILWFGIE-------- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  + +  + ++  +L E++RS+ + G   + ++ +P ++P ++ 
Sbjct: 150 EQAKVFLVALGVFFPIYVNTFHGIRSVDSNLIEMARSYGVKGVALYRHVILPGALPSILV 209

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +    W  ++ +E I          GIG     A +      ++  +L    +  +
Sbjct: 210 GVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKI 263

Query: 255 YDQL---LFRPMIVWSNKFR 271
            D L   L R  + W   ++
Sbjct: 264 ADVLAKSLERVSLRWHPAYQ 283


>gi|239623113|ref|ZP_04666144.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239522480|gb|EEQ62346.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 258

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 88/228 (38%), Gaps = 18/228 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV----DIVPITLDVHSLPQYASRTTL 70
              +   L  F+L   ++       Q    P  ++    D     +    L  +   + L
Sbjct: 9   FLYSAAGLAVFILCWQLLVSFTGVGQIFPSPFAVLRRFVDASGRKIGKCMLYSHLGYSLL 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+    +I+     +   + A SR    ++ P+  +++ IP + ++   +++F   +   
Sbjct: 69  RVTIGYLIAAAMGILVGLIMAGSRMGNAIIRPLFAMIRPIPGITWMPLFILWFGTGW--- 125

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                +  I  IF +   +M  + Y     +   L   +R    +  Q F+ + +P S+P
Sbjct: 126 -----VTQIGIIFVAGFSHMVLNTYAGATRVDPKLVGAARMLGANNTQVFYKVILPSSVP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +   + +++S  W  V+A+EM+   +      GIG  I       D+
Sbjct: 181 YIFSGLQVALSSCWMAVLAAEMMSATE------GIGWMIVSGQDNGDI 222



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 10/171 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV +  +IA+ + I VG+ +      ++ I+P   ++   P   + PL +     
Sbjct: 64  GYSLLRVTIGYLIAAAMGILVGLIMAGSRMGNAIIRPLFAMIRPIPGITWMPLFILWFGT 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +        ++      +++ N  AGA+         A        + +  +ILP   
Sbjct: 124 GWVTQ----IGIIFVAGFSHMVLNTYAGATRVDPKLVGAARMLGANNTQVFYKVILPSSV 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           PY  +G   A    W A + +E+ S       T G+G  I    + G   +
Sbjct: 180 PYIFSGLQVALSSCWMAVLAAEMMS------ATEGIGWMIVSGQDNGDIEQ 224


>gi|325273145|ref|ZP_08139441.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
 gi|324101720|gb|EGB99270.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
          Length = 281

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 94/244 (38%), Gaps = 18/244 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F+      +   +  L+      T    +  ++ + L      Q    T  ++  A V+
Sbjct: 48  WFNPFVLTALFAALAHLIQRKWSLTAFVALSFLLILNL---GYWQETMETLAQVTFATVV 104

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        +AA        + P+LD+MQ++P   +L  T+  F     G V G     
Sbjct: 105 CVAIGVPLGIVAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTV 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FAI            Y  +C++P++L +  ++F  S  Q    + +P +MP +   +  
Sbjct: 162 VFAIAAP-----IRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQ 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + ++          G+G  +  A+   D+     A L ++ +  + D++
Sbjct: 217 CIMLSLSMVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRI 269

Query: 259 LFRP 262
             +P
Sbjct: 270 CKQP 273



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 69/216 (31%), Gaps = 11/216 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    ++   F     L        T+ +V    ++   I +P+GI    +P   + ++P
Sbjct: 69  WSLTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVAIGVPLGIVAAHKPMFYTAMRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGICDVPQELM 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +   +F  +  +    I LP   P    G       + +  +++ +           GLG
Sbjct: 185 DAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVG-------ADGLG 237

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  +             L +    + L+R    P
Sbjct: 238 KPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQP 273


>gi|238059728|ref|ZP_04604437.1| ABC transporter [Micromonospora sp. ATCC 39149]
 gi|237881539|gb|EEP70367.1| ABC transporter [Micromonospora sp. ATCC 39149]
          Length = 459

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 94/269 (34%), Gaps = 17/269 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +  +S    +P+                  P                      ++    +
Sbjct: 167 VHRASGAVVAPVRTRGGGPVTADTGRTASTPRQRGVGSRIAASFRYALGLPMLLLVVWGL 226

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVVLIIIASIIWIPVGIWIGF 410
               ++ G+  +  T  +     W+G         +++R+ + +  + ++ I  G  IG 
Sbjct: 227 VGTNETSGFFPDPLTISEAFVDTWVGPAFVEDVLPSLYRLGLGVAASIVLGIAAGTVIGL 286

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   ++P  + L A P  V  P+V+  +            ++++ G  W IL N I 
Sbjct: 287 AHWLRELLEPLLEFLRAIPPPVLIPVVMLLLGITDT----MKVVVIVSGAVWPILLNTIE 342

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A  +   E A SF ++ W    +++LP   P  + G   A   A    ++SE+ +  
Sbjct: 343 GVRATDSVMTETAHSFRVSWWERLWFLVLPAASPRIMAGVRQALSVALILMVISEMFA-- 400

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                + GLG  IA         E+  G+
Sbjct: 401 ----SSAGLGYRIAYFQRNYLIAEMWSGI 425



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 98/239 (41%), Gaps = 18/239 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---QYASR 67
           +  RI  +    L   +++ ++  L+   + +    D + I    +D    P   +    
Sbjct: 202 VGSRIAASFRYALGLPMLLLVVWGLVGTNETSGFFPDPLTISEAFVDTWVGPAFVEDVLP 261

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+   +  S++      T+   +  L  +L P+L+ +++IP    +   ++      
Sbjct: 262 SLYRLGLGVAASIVLGIAAGTVIGLAHWLRELLEPLLEFLRAIPPPVLIPVVMLLLGITD 321

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K        +  I +  VW +  +  + +      + E + SFR+S W++ W+L +P 
Sbjct: 322 TMK--------VVVIVSGAVWPILLNTIEGVRATDSVMTETAHSFRVSWWERLWFLVLPA 373

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           + P ++  +  ++S     +V SEM           G+G  IA   +   L+A +++ +
Sbjct: 374 ASPRIMAGVRQALSVALILMVISEMFASSA------GLGYRIAY-FQRNYLIAEMWSGI 425


>gi|192291260|ref|YP_001991865.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285009|gb|ACF01390.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 268

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 11/256 (4%)

Query: 316 LCRTLGVIR-FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           L  TL   R +  P     +     +  +L     C +  V+  +       +V  +   
Sbjct: 3   LVETLARPRAWRLPRPDGLIQWIVPLLIILLWQAACSLGFVSARVLPAPSDVVVAGWKLL 62

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++    ++ +R  V   I   I    G+  G     +       Q++   P     
Sbjct: 63  QSGELVRNIWVSFWRASVGFAIGGSIGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALI 122

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+  G  + I  N + G  +      E+   + ++    +
Sbjct: 123 PLVILWFGI----DEEAKLFLVALGVFFPIYLNTLHGIRSVDPQLIEMGRIYGMSNVELF 178

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +I PG  P    G   A G  W   IV+E  +       ++GLG    ++ E      
Sbjct: 179 RRVIFPGALPSVFVGVRFALGIMWLTLIVAETIA------ASSGLGYMAMQAREFMLIDV 232

Query: 555 VVLGVLIMCCFVLALN 570
           VVL +LI        +
Sbjct: 233 VVLSILIYALLGKLAD 248



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 91/253 (35%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  +L     ++     +    P D+V      L    L +    +  R      I   
Sbjct: 28  LLIILLWQAACSLGFVSARVLPAPSDVVVAGWKLLQSGELVRNIWVSFWRASVGFAIGGS 87

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F +      S     +    L +++++P L  +   +++F           E A +F 
Sbjct: 88  IGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALIPLVILWFGID--------EEAKLFL 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    + ++   L E+ R + +S  + F  +  P ++P +   +  ++ 
Sbjct: 140 VALGVFFPIYLNTLHGIRSVDPQLIEMGRIYGMSNVELFRRVIFPGALPSVFVGVRFALG 199

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          G+G     A +   +  ++ ++L    +  L D   +L
Sbjct: 200 IMWLTLIVAETIAASS------GLGYMAMQAREFMLIDVVVLSILIYALLGKLADSASRL 253

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   F+
Sbjct: 254 LERQTLSWHPAFQ 266


>gi|296878635|ref|ZP_06902640.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP07]
 gi|296430442|gb|EFH16284.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP07]
          Length = 157

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 4/139 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ RV+   I A +  +P+G  +GF       + P    +   P   + PL +     
Sbjct: 23  FITLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFGI 82

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+ F   + I+ N I G  A   D+   A S   +    +  +I+P   
Sbjct: 83  GDG----PTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPASL 138

Query: 504 PYYVTGAITACGGAWNASI 522
           P  +TG+  A    W + I
Sbjct: 139 PDILTGSRIAISTGWMSVI 157



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
           +P D++      +           T  R+L   + +LLF      +   S+    VL P+
Sbjct: 1   MPVDVIKGFFFCVTDAETVTNLFITLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPV 60

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +D ++ +PI+ ++  T+V+F               IF I  S V+ +  +  Q +  I +
Sbjct: 61  VDSVRQVPIMAWVPLTIVWFGIGDGP--------TIFLIAFSGVFPIILNTIQGVRAISK 112

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           D    +RS   S    F  + +P S+P ++    +++S GW  V+
Sbjct: 113 DYYNAARSMGASPIVIFTNVIIPASLPDILTGSRIAISTGWMSVI 157


>gi|260888760|ref|ZP_05900023.1| taurine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330839846|ref|YP_004414426.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260861513|gb|EEX76013.1| taurine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329747610|gb|AEC00967.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 253

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 12/215 (5%)

Query: 346 IFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           +FW  +         +    +  I+          +      ++ R  V  + + ++ + 
Sbjct: 16  LFWQAICAFGGWHEALFPSPLAAILGFVELLKDGVLFEDVAASLVRFAVGYLASVLLALA 75

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            G+ +G+   + + + P AQ+L       + P +V               +++     + 
Sbjct: 76  AGLILGWYSKVWAYLNPIAQVLRPVSPVAWLPFIVLFFGIGEA----PAIVIIFLAAFFP 131

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +L   +A        + +VA +F I     +  IILP IFP   TG   A G AW   + 
Sbjct: 132 VLLATVAAVQKLDPVYLKVAQNFGIKEPAVFTKIILPAIFPQIATGLHLALGTAWVFLVA 191

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            E+          +GLG  I ++        ++  
Sbjct: 192 GEMVG------AQSGLGFLIIDARNNLRADLLMAA 220



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 92/243 (37%), Gaps = 16/243 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--LDVHSLPQYASRTTLRMLSAM 76
           +    A  L+         G  E   P  +  I+     L    L +  + + +R     
Sbjct: 7   LIGAAAVTLLFWQAICAFGGWHEALFPSPLAAILGFVELLKDGVLFEDVAASLVRFAVGY 66

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + S+L       +     ++   L PI  +++ +  + +L F V++F           E 
Sbjct: 67  LASVLLALAAGLILGWYSKVWAYLNPIAQVLRPVSPVAWLPFIVLFFGIG--------EA 118

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            AI  IF +  + +  +   ++  +     +V+++F +     F  + +P   P +   +
Sbjct: 119 PAIVIIFLAAFFPVLLATVAAVQKLDPVYLKVAQNFGIKEPAVFTKIILPAIFPQIATGL 178

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W F+VA EM+          G+G  I  A        ++ A+LT+  +  L D
Sbjct: 179 HLALGTAWVFLVAGEMVG------AQSGLGFLIIDARNNLRADLLMAAILTIGLLGLLLD 232

Query: 257 QLL 259
             +
Sbjct: 233 SAM 235


>gi|42782015|ref|NP_979262.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           cereus ATCC 10987]
 gi|42737939|gb|AAS41870.1| sulfonate ABC transporter, permease protein, putative [Bacillus
           cereus ATCC 10987]
          Length = 284

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 92/255 (36%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P  I       +    L  + S +  R  +   I   
Sbjct: 41  IVVLIIWQLAGVFDLVSKTVLPTPLHIFLAFQELIKTGELYGHLSISVFRAAAGFFIGGS 100

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 101 LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 159

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 160 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLG 212

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 213 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 266

Query: 259 LFRPMIVWSNKFRLE 273
           L    + W + F+ E
Sbjct: 267 LEVKFLRWRDNFKGE 281



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++FR      I   + I +G  +GF       + P  Q+L   P     PL V    + 
Sbjct: 86  ISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      LL+  G  + +  N   G     +   +VA     +  +    +ILP   P
Sbjct: 146 ETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G+     
Sbjct: 202 NLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGI----- 250

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
            + A        L        
Sbjct: 251 IIFAFVGKFSDSLVRLLEVKF 271


>gi|72162093|ref|YP_289750.1| ABC transporter membrane protein [Thermobifida fusca YX]
 gi|71915825|gb|AAZ55727.1| putative ABC transporter membrane protein [Thermobifida fusca YX]
          Length = 281

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +   +IA    IP+GI + +   +   + P  ++     A    P+ V     
Sbjct: 87  AASLGRGLTGFLIAVATAIPLGILVAWYRPVCDLLAPLLEVFRNTAALALLPVFVLLFGI 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+++   + IL N I G         + A S   +    +  ++LP   
Sbjct: 147 GETSK----IALVVYACTFPILLNTITGVRTVDPLLVKAAVSLGFSPVSVFTKVVLPAAV 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   +    + +E+          +GLG  +  S        +  G++ + 
Sbjct: 203 PSVFTGIRMAGTSSILVLVAAEMVG------ARSGLGYLVQASQLNFQITHMYAGIIAIA 256

Query: 564 CFV 566
              
Sbjct: 257 AVG 259



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 90/230 (39%), Gaps = 15/230 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           AF+L+  +   L    +    P  +++  + + +    + ++ + +  R L+  +I++  
Sbjct: 44  AFLLLWELAPRLGLVDRVFLPPLSEVLGTLLVLVRNGQMGEHVAASLGRGLTGFLIAVAT 103

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L A  R +  +L P+L++ ++   L  L   V+ F           E + I  +
Sbjct: 104 AIPLGILVAWYRPVCDLLAPLLEVFRNTAALALLPVFVLLFGIG--------ETSKIALV 155

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  +    +  +   L + + S   S    F  + +P ++P +   + M+ + 
Sbjct: 156 VYACTFPILLNTITGVRTVDPLLVKAAVSLGFSPVSVFTKVVLPAAVPSVFTGIRMAGTS 215

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
               +VA+EM+          G+G  +  +     +  +   ++ +  V 
Sbjct: 216 SILVLVAAEMVG------ARSGLGYLVQASQLNFQITHMYAGIIAIAAVG 259


>gi|325290853|ref|YP_004267034.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966254|gb|ADY57033.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 278

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 11/198 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFP 435
             ++    I++FR  +  +IA +I IP+G  +G +   +   + P  +  +     + F 
Sbjct: 71  GVLLKHMEISIFRAFLGFLIAMVIGIPLGFLLGGWFKRLQLALGPLLEFFSQTNPFILFH 130

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +          ++ + I    W I+F+ I+G         + A  F +     + 
Sbjct: 131 LIMLFLGIGEATKVSIIAWVCI----WPIIFSTISGIQNTNPYLLKAARGFGLNRLSLFY 186

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I+LP   P    G   + G ++   I +E+         ++GLG  I  S E      +
Sbjct: 187 KIVLPSAGPAIFVGLRLSAGYSFFMLIAAEMMG------SSSGLGWLILNSQENYDILRI 240

Query: 556 VLGVLIMCCFVLALNRFL 573
                ++    L ++  +
Sbjct: 241 FASATVIALLGLGVDLLM 258



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 87/242 (35%), Gaps = 16/242 (6%)

Query: 20  FDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             +  F+LV   +  + L           ++      L    L ++   +  R     +I
Sbjct: 31  ISIAVFLLVWETVSRLKLVNPLFIPPVTKVLGKTWEMLMDGVLLKHMEISIFRAFLGFLI 90

Query: 79  SLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++       L     +RL + L P+L+              +++            E  
Sbjct: 91  AMVIGIPLGFLLGGWFKRLQLALGPLLEFFSQTNPFILFHLIMLFLGIG--------EAT 142

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  I    +W + FS    + N    L + +R F L+    F+ + +P + P +   + 
Sbjct: 143 KVSIIAWVCIWPIIFSTISGIQNTNPYLLKAARGFGLNRLSLFYKIVLPSAGPAIFVGLR 202

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S    +F ++A+EM+          G+G  I  + +  D+L I  +   +  +    D 
Sbjct: 203 LSAGYSFFMLIAAEMMGSSS------GLGWLILNSQENYDILRIFASATVIALLGLGVDL 256

Query: 258 LL 259
           L+
Sbjct: 257 LM 258


>gi|260767494|ref|ZP_05876430.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
 gi|260617394|gb|EEX42577.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio furnissii CIP 102972]
          Length = 280

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  ++F      + I +   L   +  +      +    + +      Q    T + + +
Sbjct: 41  VLVDVFKWFPPAVPIIVTAALAWWLHRSLSLVIFIIAALLLILNLGYWQEMLETFVLVFA 100

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A  IS+L       +AA    +  V+ PILD+MQ++P   +L  T+V F     G V G 
Sbjct: 101 ATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGL 157

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFAI            Y  +  +P  L E  ++F  S  +  + + +P ++P ++ 
Sbjct: 158 ISTIIFAIAAP-----IRLTYLGVTRVPEALIEAGKAFGASKMKLLFKVELPAALPSIMA 212

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   +      VV + ++          G+G  +  A+   ++     A L ++ V  +
Sbjct: 213 GITQCIMLSLSMVVIAALV-------GADGLGKPVIRALNTVNISQGFEAGLAIVLVAII 265

Query: 255 YDQL 258
            D+L
Sbjct: 266 LDRL 269



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 18/283 (6%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
            K     ++           S     +   L  I     + F        +     + W+
Sbjct: 5   HKIPLGHWMEAGVDWLTLHASGFFDAISFLLESIIMVLVDVFKWFPPAVPIIVTAALAWW 64

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                  +     ++  I+N   +Q++L    L       V     I+ +I +P+GI   
Sbjct: 65  LHRSLSLVIFIIAALLLILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAA 117

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP + + ++P   L+   P  V+    +  +  + L     L   +IF     I     
Sbjct: 118 HRPWMYTVMRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TY 173

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G +  P    E   +F  +  +    + LP   P  + G       + +  +++ +   
Sbjct: 174 LGVTRVPEALIEAGKAFGASKMKLLFKVELPAALPSIMAGITQCIMLSLSMVVIAALVG- 232

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   GLG  +  +    +  +     L +    + L+R 
Sbjct: 233 ------ADGLGKPVIRALNTVNISQGFEAGLAIVLVAIILDRL 269


>gi|229821916|ref|YP_002883442.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229567829|gb|ACQ81680.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 301

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 12/248 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              + +      V  +L   W  V     V                       +     I
Sbjct: 45  RSRWWRTAVGLIVPLLLLAAWQLVTATGVVPAYQLPSPGSVWDAAVDLAQRGVLGQYVAI 104

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV++   I  ++ + VG  +G     ++   P      A P+  + PL+V  +    
Sbjct: 105 STQRVLIGFAIGGLLGLAVGSVVGLSRLSAALFAPTLAGARAVPSLAWVPLLVLWIGINE 164

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+  G  + +   V            E   ++ + G R    + LP + P 
Sbjct: 165 DSK----VILIAIGAFFPVYTTVAGALRHVDPHLVEAGRAYGLCGPRLLARVQLPAVVPA 220

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+G   A   AW   + +E+ +       + GLG  + +S + G    ++L ++++   
Sbjct: 221 VVSGLRLALAQAWLFLVAAELLN------SSMGLGFLLLDSGQNGRVDRMILAIVLLAVL 274

Query: 566 VLALNRFL 573
             A +  +
Sbjct: 275 GKATDGVV 282



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 99/247 (40%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R    +   L  +    ++         +   P  + D          L QY + +T R+
Sbjct: 50  RTAVGLIVPLLLLAAWQLVTATGVVPAYQLPSPGSVWDAAVDLAQRGVLGQYVAISTQRV 109

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I  L      ++   SR    +  P L   +++P L ++   V++       KVI
Sbjct: 110 LIGFAIGGLLGLAVGSVVGLSRLSAALFAPTLAGARAVPSLAWVPLLVLWIGINEDSKVI 169

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A F ++T+        +  +L ++   L E  R++ L G +    + +P  +P +
Sbjct: 170 LIAIGAFFPVYTT--------VAGALRHVDPHLVEAGRAYGLCGPRLLARVQLPAVVPAV 221

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + ++++  W F+VA+E++          G+G  +  + +   +  ++ A++ +  + 
Sbjct: 222 VSGLRLALAQAWLFLVAAELL------NSSMGLGFLLLDSGQNGRVDRMILAIVLLAVLG 275

Query: 253 FLYDQLL 259
              D ++
Sbjct: 276 KATDGVV 282


>gi|121610976|ref|YP_998783.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555616|gb|ABM59765.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 290

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79
            +LA    + I  + + G +       +  ++ + L  V         T    LSA +IS
Sbjct: 54  GMLAIPFWLTIAVVSVIGWRRLGAGFGMFVLLALALIVVTGFWPQTMVTLALTLSATLIS 113

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L F        A+S R+   + P+LD MQ++P   +L    + F     G+V G     I
Sbjct: 114 LFFGIPLGIGCARSNRVNACVRPVLDFMQTMPAFVYLIPAAMLFGL---GRVPGTIATVI 170

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  +  +  E   +F  +  Q  + + +P +MP ++  +  +
Sbjct: 171 FAMP-----PVVRLTSLGIRQVSTEQVEAGNAFGCTSTQLLFKVQLPIAMPTIMAGVNQT 225

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      V+ + M+  G       G+G+ +  +I+  D+     + L ++ +  + D+L
Sbjct: 226 IMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLAVVLLAIILDRL 277



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 74/231 (32%), Gaps = 16/231 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             F +   V   I W+ +G     +++       V        +T+   +   +I+    
Sbjct: 58  IPFWLTIAVVSVIGWRRLGAGFGMFVLLALALIVVTGFWPQTMVTLALTLSATLISLFFG 117

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+GI       +++ ++P    +   PA V+            +   +   +       
Sbjct: 118 IPLGIGCARSNRVNACVRPVLDFMQTMPAFVYLIPAAMLFGLGRVPGTIATVIF----AM 173

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++     G      +  E  ++F  T  +    + LP   P  + G       A +  
Sbjct: 174 PPVVRLTSLGIRQVSTEQVEAGNAFGCTSTQLLFKVQLPIAMPTIMAGVNQTIMMALSMV 233

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           I++ +   G       GLG  +  S ++          L +    + L+R 
Sbjct: 234 IIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLAVVLLAIILDRL 277


>gi|328551972|gb|AEB22464.1| OpuAB [Bacillus amyloliquefaciens TA208]
 gi|328910239|gb|AEB61835.1| Glycine betaine transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 282

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +I   L     T        I  + +D         +T   ++++++IS++     
Sbjct: 52  ILLTVIFAALAWWISTRGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLISIIIGVPI 111

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IFA+    
Sbjct: 112 GVWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIFAMP--- 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                      +  +P DL E + +F  +  Q+ + + +P +   ++  +  S+      
Sbjct: 166 --PTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLALSM 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+         PG+GS +  A+ +      + A + ++ V    D++
Sbjct: 224 VVIAAMV-------GAPGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
            L      ++  +   +AW      +  FT    L + +LG       T+  VV  ++I+
Sbjct: 45  GLGFIPSILLTVIFAALAWWISTRGIALFTLIGFLVIDYLGYWSPMLQTLALVVTSVLIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II +P+G+W   +  +   + P   L+   PA V+    +   +   +   +   +   
Sbjct: 105 IIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                  +   + G    P D  E   +F  T  +    + LP      + G   +   A
Sbjct: 163 --AMPPTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 221 LSMVVIAAMVG-------APGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRI 268


>gi|323496152|ref|ZP_08101211.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
 gi|323318790|gb|EGA71742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           sinaloensis DSM 21326]
          Length = 280

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  +  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  I     + F  +     +     I W+   
Sbjct: 10  PLGQWMETGVDWLTDNAAGLFDAISIFLETIILFVVDIFKWMPPAMPIVMTAAIAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +PVGI    RP
Sbjct: 70  SIPLVLFVVAALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPVGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  T  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELVEAGKAFGATRMKLLFKVELPAAMPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|239814904|ref|YP_002943814.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801481|gb|ACS18548.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 275

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 12/253 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS--IGY 366
           +S  +           F F  +  ++        +    W  +     +  A+ S     
Sbjct: 1   MSAVLDAPAARPPGRFFRFARSLGRIAERGIGIVIFLALWEALPRLGVVSDAYLSPPSAV 60

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           + +     D   +      ++ R +  +++AS   + +G+ IG    +++ + P  QL  
Sbjct: 61  LASIAQLVDTGQLWKHVAASLQRSLWGLLLASFSGLVLGLLIGSSKRLAAIVDPVLQLFR 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
              A   FP+ +  +    L+       ++ + + W +L + ++G           A S 
Sbjct: 121 QTSAFALFPVFILFLGIGELSK----VAIIFWASFWPVLLSTVSGVKQVDRLLVNSALSM 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +    +  ++LP   P   TG   A   +  A + +E+          +GLG     S
Sbjct: 177 GASQRFVFFKVVLPASLPSIFTGVRLAGAYSITALVAAEMIG------AHSGLGFLTLNS 230

Query: 547 TEKGSFPEVVLGV 559
            E    P +  G+
Sbjct: 231 QETFQIPTMYAGI 243



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 89/233 (38%), Gaps = 15/233 (6%)

Query: 14  RIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RI      ++ F+ +   +  + +      + P  ++  +   +D   L ++ + +  R 
Sbjct: 25  RIAERGIGIVIFLALWEALPRLGVVSDAYLSPPSAVLASIAQLVDTGQLWKHVAASLQRS 84

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++++     V   L   S+RL  ++ P+L + +           +++          
Sbjct: 85  LWGLLLASFSGLVLGLLIGSSKRLAAIVDPVLQLFRQTSAFALFPVFILFLGIG------ 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             EL+ +  IF +  W +  S    +  + R L   + S   S    F+ + +P S+P +
Sbjct: 139 --ELSKVAIIFWASFWPVLLSTVSGVKQVDRLLVNSALSMGASQRFVFFKVVLPASLPSI 196

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
              + ++ +     +VA+EMI          G+G     + +   +  +   +
Sbjct: 197 FTGVRLAGAYSITALVAAEMIG------AHSGLGFLTLNSQETFQIPTMYAGI 243


>gi|289672263|ref|ZP_06493153.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330939256|gb|EGH42657.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 265

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 97/253 (38%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   ++
Sbjct: 246 LERVCLRWHPAYQ 258


>gi|229161776|ref|ZP_04289755.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus R309803]
 gi|228621743|gb|EEK78590.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus R309803]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 18/256 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V++    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLYDVAKVLEFSKRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLER 274
           L    + W + F+ E 
Sbjct: 265 LEVKFLRWRDNFKGET 280



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 22/243 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L       V  + I         +        +   +    +     +   +  S+   
Sbjct: 30  VLVRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRA 89

Query: 403 PVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
             G +IG            F       + P  Q+L   P     PL V    +   +   
Sbjct: 90  AAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK-- 147

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + GA
Sbjct: 148 --VLLIADGAFFPLYVNAFLGIRGVDSKLYDVAKVLEFSKRKLITKLILPAALPNLLLGA 205

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        +
Sbjct: 206 RLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSD 259

Query: 571 RFL 573
             +
Sbjct: 260 SLV 262


>gi|291287940|ref|YP_003504756.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885100|gb|ADD68800.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 279

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 91/233 (39%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I I+  L        V    +  +   + +  L + A  T   ++ +++   +    
Sbjct: 56  LVLIAILAFLAFRYAGKRVTIFTIATM-FLIGMLGLWEEAMITLAMVICSVLFCAIVGIP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L+ +S R    + P LD MQ+ P   +L   V+ F     G V G     +FA+   
Sbjct: 115 LGILSGRSNRFESCIRPFLDAMQTTPAFVYLVPVVMLFS---IGTVSGVLATIVFAMP-- 169

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  +  +L E + SF  +  Q    + +P +MP ++  +  ++     
Sbjct: 170 ---PIIRLTGLGIRQVHPELVEAAVSFGATPMQVLRKVQIPLAMPSIMAGLNQTIMMSLS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I  G       G+G+ +   +   D+       L ++ +  + D++
Sbjct: 227 MVVIAALIGAG-------GLGTPVFQGLNTLDIGLATIGGLGIVLLAMVLDRI 272



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 78/227 (34%), Gaps = 11/227 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +    +          +   + +       +L +     IT+  V+  ++  +I+ IP+G
Sbjct: 57  VLIAILAFLAFRYAGKRVTIFTIATMFLIGMLGLWEEAMITLAMVICSVLFCAIVGIPLG 116

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I  G      S I+PF   +   PA V+   VV   S   ++  L   +         I+
Sbjct: 117 ILSGRSNRFESCIRPFLDAMQTTPAFVYLVPVVMLFSIGTVSGVLATIVF----AMPPII 172

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E A SF  T  +  R + +P   P  + G       + +  +++ 
Sbjct: 173 RLTGLGIRQVHPELVEAAVSFGATPMQVLRKVQIPLAMPSIMAGLNQTIMMSLSMVVIAA 232

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   G       GLG  + +           +G L +    + L+R 
Sbjct: 233 LIGAG-------GLGTPVFQGLNTLDIGLATIGGLGIVLLAMVLDRI 272


>gi|163746754|ref|ZP_02154111.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161379868|gb|EDQ04280.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 277

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 95/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I +   +  GIQ        V +  + +      +    +   +LSA V+ +     
Sbjct: 54  LILIAVFAAITWGIQRNWKTVAFVVLGFLFILNQDYWEETMESLTLVLSACVVCMGVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 IGIAVAHRPRLYAWVAPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P+ L E +++F     Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTQLGISSTPKALLEAAQAFGAKPRQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+ + +      + L ++ V  + D++L
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNQVNTGLGFESGLVIVVVAIMLDRIL 272



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L +          I   W+++ ++V  F +            ++  V+   ++   
Sbjct: 50  TPHPLILIAVFAAITWGIQRNWKTVAFVVLGFLFILNQDYWEETMESLTLVLSACVVCMG 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +  RP + + + P   L+   P  V+    +       +   +   + ++  
Sbjct: 110 VGVPIGIAVAHRPRLYAWVAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E A +F     +    I LP   P  +TG       + +
Sbjct: 170 ---PIRL-TQLGISSTPKALLEAAQAFGAKPRQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +        L++    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTGLGFESGLVIVVVAIMLDRIL 272


>gi|281355624|ref|ZP_06242118.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281318504|gb|EFB02524.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 352

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 10/172 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI  G  P      +P  + +  FPA VF  L V+ +       +     +++ GT 
Sbjct: 144 VPLGILCGAFPFFERLFEPVVEFIRYFPAPVFATLAVAILGI----NDAPKVAIIVIGTF 199

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  L  +            E A +      R    +++P + P          G AW   
Sbjct: 200 FQQLPMIANTTRQADPALIEAAQTLGAGRKRILMRVVIPSVLPKLYKDMRILLGWAWTYL 259

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           IV+EV         TTG+  +I +  +  +F  V   ++I+ C  LA + FL
Sbjct: 260 IVAEVVG------TTTGISWFITQQAKYRNFANVYAAIVIIGCIGLACDMFL 305



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 58/176 (32%), Gaps = 14/176 (7%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L         +  P+++ ++  P   F T  V         KV    +   F   
Sbjct: 144 VPLGILCGAFPFFERLFEPVVEFIRYFPAPVFATLAVAILGINDAPKVAIIVIGTFF--- 200

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q   M  +           L E +++      +    + +P  +P L  +M + +   
Sbjct: 201 --QQLPMIANTT---RQADPALIEAAQTLGAGRKRILMRVVIPSVLPKLYKDMRILLGWA 255

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           W +++ +E++          GI  +I    K ++   +  A++ +  +    D  L
Sbjct: 256 WTYLIVAEVVG------TTTGISWFITQQAKYRNFANVYAAIVIIGCIGLACDMFL 305


>gi|158424788|ref|YP_001526080.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331677|dbj|BAF89162.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 277

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 10/196 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +       +      T+ R+     +  +    +G   G      + + P  Q L A P+
Sbjct: 70  YGLARSGELAPHIAATLQRIAAGFALGVVAGTALGALSGASGLARTIVDPTLQGLRAIPS 129

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL +  +  +  +       L+  G  + +    +    A      EV   F  +G
Sbjct: 130 IAWVPLFILWLGIFEASK----VTLIAVGVFFPVYLGTLGAVMAVDRKIIEVGQVFLFSG 185

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R I+LP I P+YVT      G  W   + +E          + GLG  + +  + G
Sbjct: 186 PTMVRRILLPAILPHYVTALRAGLGLGWMFVVAAEFMG------ASEGLGYLLLDGQQLG 239

Query: 551 SFPEVVLGVLIMCCFV 566
              ++V  +L+     
Sbjct: 240 KPDQIVAAILVFAVLG 255



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 15/231 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLL 81
           +   LV                P   +      L     L  + + T  R+ +   + ++
Sbjct: 39  VGLALVWEFAVRSGLAQGRLLPPPSRIAEALYGLARSGELAPHIAATLQRIAAGFALGVV 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L+  S     ++ P L  +++IP + ++   +++            E + +  
Sbjct: 99  AGTALGALSGASGLARTIVDPTLQGLRAIPSIAWVPLFILWLGIF--------EASKVTL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +      ++  + R + EV + F  SG      + +P  +P  V  +   + 
Sbjct: 151 IAVGVFFPVYLGTLGAVMAVDRKIIEVGQVFLFSGPTMVRRILLPAILPHYVTALRAGLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            GW FVVA+E +   +      G+G  +    +      I+ A+L    + 
Sbjct: 211 LGWMFVVAAEFMGASE------GLGYLLLDGQQLGKPDQIVAAILVFAVLG 255


>gi|159039027|ref|YP_001538280.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157917862|gb|ABV99289.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 292

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 16/257 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-L 61
           L++ +  F+   + P    L A   ++ I+     G    +    +   V ++L      
Sbjct: 31  LFDRIAAFVDALVEPLTDLLTAPPAIVVILIFAGLGWWLRSWKFGLGTAVGLSLVAGMPF 90

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   +L A  ++LL       L A++RR   +  P+LD+MQ++P   +L   V 
Sbjct: 91  WEETMSTLALVLVASGLALLIAVPLGILVAENRRASALARPVLDLMQTMPAFVYLIPAVS 150

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     +F++               L  + R++ E   +F  S      
Sbjct: 151 FFS---IGAVPGVLATVVFSMPPG-----VRLTELGLRQVDREVIEAGEAFGASPSTILL 202

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
              +P ++P ++  +   +      VV + M+  G       G+G  I  A    ++   
Sbjct: 203 RTKLPLALPTIMTGVNQVIMLALSMVVIAGMVGAG-------GLGDVIIKAFSRVEVDTG 255

Query: 242 LYAMLTMLGVIFLYDQL 258
               + ++ +  + D+L
Sbjct: 256 FEGGIAVVILAVVLDRL 272



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIA 397
           +L      VV  +  G+ W    +     T   +  V  +        T+  V+V   +A
Sbjct: 49  LLTAPPAIVVILIFAGLGWWLRSWKFGLGTAVGLSLVAGMPFWEETMSTLALVLVASGLA 108

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I +P+GI +      S+  +P   L+   PA V+    VS  S   +   L   +   
Sbjct: 109 LLIAVPLGILVAENRRASALARPVLDLMQTMPAFVYLIPAVSFFSIGAVPGVLATVVF-- 166

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +     G      +  E   +F  +         LP   P  +TG       A
Sbjct: 167 --SMPPGVRLTELGLRQVDREVIEAGEAFGASPSTILLRTKLPLALPTIMTGVNQVIMLA 224

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +   G       GLG  I ++  +        G + +    + L+R 
Sbjct: 225 LSMVVIAGMVGAG-------GLGDVIIKAFSRVEVDTGFEGGIAVVILAVVLDRL 272


>gi|71278998|ref|YP_271573.1| amino acid ABC transporter permease [Colwellia psychrerythraea 34H]
 gi|71144738|gb|AAZ25211.1| amino acid ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 346

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 91/232 (39%), Gaps = 14/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+IG+  I +  +  +     +  I    L       YA +T   +     IS+L     
Sbjct: 114 LLIGLTLIAVQMMTRSKGATLLTAITWFFLAFIDHYSYAVQTMAIIFVCTGISVLLGVPI 173

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               +K  R    ++PILD++Q++P   +L   +  F                 AI    
Sbjct: 174 GIAMSKYDRFQKGVIPILDMLQTLPSFVYLIPLIFLFSVTESKLYG-------IAIIMYA 226

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  + +D+ E + +F +S  QK + + +P ++P ++  +  ++      
Sbjct: 227 IVPVIRLTDLGIRLVDKDIIEGANAFGMSARQKLFNVELPLALPNIMAGVNQTIMMSLAM 286

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + ++         PG+G  +   I   +L   L +   ++ +  L D++
Sbjct: 287 VVIASLVS-------APGLGVLVLRGINNLELGVGLVSGFCIVILAILLDRV 331



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 77/229 (33%), Gaps = 15/229 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIASIIWI 402
           W+ ++    I +   +        T     ++ ++        TM  + V   I+ ++ +
Sbjct: 112 WWLLIGLTLIAVQMMTRSKGATLLTAITWFFLAFIDHYSYAVQTMAIIFVCTGISVLLGV 171

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +         + P   +L   P+ V+    +  +  + +  +    + +I     
Sbjct: 172 PIGIAMSKYDRFQKGVIPILDMLQTLPSFVYL---IPLIFLFSVTESKLYGIAIIMYAIV 228

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      D  E A++F ++  +    + LP   P  + G       +    +
Sbjct: 229 PVIRLTDLGIRLVDKDIIEGANAFGMSARQKLFNVELPLALPNIMAGVNQTIMMSLAMVV 288

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           ++ + S         GLG  +            ++    +    + L+R
Sbjct: 289 IASLVS-------APGLGVLVLRGINNLELGVGLVSGFCIVILAILLDR 330


>gi|313905915|ref|ZP_07839271.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313469256|gb|EFR64602.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 253

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 96/245 (39%), Gaps = 17/245 (6%)

Query: 336 SNQRVSYMLDIFWFCV-VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMF 388
           +  ++     I W  + +    I + +    +     T+     ++  G       I++ 
Sbjct: 4   AAVKIIKSGIISWIVLFIAWGVISLFYTESFFPSPTETFAGFKEILLNGKLWEDISISVQ 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++    A +I IPVG+ IG    ++  ++PF       PA  F  L +        + 
Sbjct: 64  RVLLGWSRALLIGIPVGLLIGRFRIVNWFVEPFVNFFRFVPAIGFLTLFLMWFGVGEESK 123

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                +L+ + + + ++ N IAG +       + A S     ++ +  + +PG  P  +T
Sbjct: 124 ----LILITYASIFPVVINTIAGVNTINPVKYQAAESLGANRFQSFLTVTVPGAVPSILT 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           GA      A  + + +E+ +        +GLG  +  S        + +G++ +     +
Sbjct: 180 GARLGLSTAIISIVGAEMLA------ANSGLGYLVYTSRLYYRTDWIFVGIVTLGILGFS 233

Query: 569 LNRFL 573
            ++ L
Sbjct: 234 ADKAL 238



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 93/245 (37%), Gaps = 15/245 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I   I   +   +  G+I++  +       P +        L    L +  S +  R+L 
Sbjct: 9   IKSGIISWIVLFIAWGVISLF-YTESFFPSPTETFAGFKEILLNGKLWEDISISVQRVLL 67

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
               +LL       L  + R +   + P ++  + +P +GFLT  +++F           
Sbjct: 68  GWSRALLIGIPVGLLIGRFRIVNWFVEPFVNFFRFVPAIGFLTLFLMWFGVG-------- 119

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + +  I  + ++ +  +    +  I     + + S   + +Q F  + VP ++P ++ 
Sbjct: 120 EESKLILITYASIFPVVINTIAGVNTINPVKYQAAESLGANRFQSFLTVTVPGAVPSILT 179

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              + +S     +V +EM+          G+G  +  +        I   ++T+  + F 
Sbjct: 180 GARLGLSTAIISIVGAEMLAANS------GLGYLVYTSRLYYRTDWIFVGIVTLGILGFS 233

Query: 255 YDQLL 259
            D+ L
Sbjct: 234 ADKAL 238


>gi|218531936|ref|YP_002422752.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218524239|gb|ACK84824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 353

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     I+S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y 
Sbjct: 161 SIQIIFWGFTISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD 220

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      R  R +I+P + P 
Sbjct: 221 GPK----IAIIVIGTFFQQVLVIANTTRRVDPLLIEAALTMGSRNLRLIRRVIVPAVLPQ 276

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   +L++   
Sbjct: 277 IYRDQRILLGWAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLV 330

Query: 566 VLALNR---FLWHPLYLYGT 582
            +A +     L   L+ Y  
Sbjct: 331 GIATDIALALLGRRLFPYAR 350



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +   P   D   LP     +   +     IS L       L      +  +  P+++ ++
Sbjct: 142 LTAPPPQRDTIWLPASLWHSIQIIFWGFTISSLVGVPLGILCGAQPTIARLTEPVIEFVR 201

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            +P   F    V         K        I  I     +     +  +   +   L E 
Sbjct: 202 YLPAPAFGALMVAILGIYDGPK--------IAIIVIGTFFQQVLVIANTTRRVDPLLIEA 253

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + +      +    + VP  +P +  +  + +   W +++ +E+I          GI  +
Sbjct: 254 ALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLGWAWTYLIVAELIGTSS------GITFF 307

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           I    + Q    +  A+L +  V    D    LL R +  ++
Sbjct: 308 ITQQARYQHFDNVYAAILVIGLVGIATDIALALLGRRLFPYA 349


>gi|256059322|ref|ZP_05449524.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella neotomae 5K33]
          Length = 272

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++   +   + I +G+ IG   ++ + + P    L   P     PL V       
Sbjct: 83  SLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGIDE 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++      +L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 143 MSK----YMLIAFGTFTPTVVATYGAVDNVDRSLIRMWQSFGLSWWSIVRKIVLPGAFPA 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+G+YI E+       ++  GV I+   
Sbjct: 199 ILSGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVM 252

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            L +N  +      +  R  
Sbjct: 253 GLIVNVVI-----GWVERRF 267



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L Q+   +  R++    + +        +      +   LV
Sbjct: 57  LPRPSAVLETFGQLWQTGLLWQHLLPSLQRLIIGASLGIAVGISLGVMIGLFSYVRAGLV 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F           E++    I          + Y ++ N+
Sbjct: 117 PLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTPTVVATYGAVDNV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P + P ++  + +S+S     +VA+EM+        
Sbjct: 169 DRSLIRMWQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 223 QYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|311897882|dbj|BAJ30290.1| putative aliphatic sulfonate ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 277

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R  + +   +   + + +  G      + I   AQL  A P     PL +      
Sbjct: 84  VSLQRAALGLAFGTTAGVLLALAAGLSRLGEALIDGTAQLFRALPILALVPLAILWFGIG 143

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L+  GT + +  N  A  +     + E+A +  +    + R I LPG  P
Sbjct: 144 ----EEVKIILVALGTFFPVYVNTHAALTGLDLRWAELARTVGLGRLGFLRRIALPGAAP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + TG   A   +W   +VSE  +        +G+G  + ++   G    +V+G+++   
Sbjct: 200 GFFTGLRLAVTVSWLVLVVSEQIN------ADSGIGYLMEQARTFGQTDVIVVGLVVYGL 253

Query: 565 FVLALN---RFLWHPLYLY 580
             LA +   R L   +  +
Sbjct: 254 LGLASDTLVRLLERRVLRW 272



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       L    L  +   +  R    +        + A  A  SR    ++ 
Sbjct: 59  LAPPGAVGQQGWELLSSGQLGHHLWVSLQRAALGLAFGTTAGVLLALAAGLSRLGEALID 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
               + +++PIL  +   +++F           E   I  +     + +  + + +L  +
Sbjct: 119 GTAQLFRALPILALVPLAILWFGIG--------EEVKIILVALGTFFPVYVNTHAALTGL 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R+  L        + +P + PG    + ++++  W  +V SE I        
Sbjct: 171 DLRWAELARTVGLGRLGFLRRIALPGAAPGFFTGLRLAVTVSWLVLVVSEQINADS---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             GIG  +  A        I+  ++    +    D   +LL R ++ W
Sbjct: 227 --GIGYLMEQARTFGQTDVIVVGLVVYGLLGLASDTLVRLLERRVLRW 272


>gi|295399916|ref|ZP_06809897.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111562|ref|YP_003989878.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|294978319|gb|EFG53916.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216663|gb|ADP75267.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 265

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 91/251 (36%), Gaps = 12/251 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
             + +NF+       V   + I W    V   +A  I    +  +           +   
Sbjct: 2   RQWNKNFVITGMGLIVPIFIVILWQISSVNGWIAANIMPSPLKIVSTIVDLFRGGELQEH 61

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             IT++RV +  ++ + + + +G+  G+   I   + P  Q L   P+  + PL +  + 
Sbjct: 62  VGITLYRVSMGFLLGTALALLLGVLNGYFRTIRYLLDPLIQALRNIPSLAWVPLFILWMG 121

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +       L+  G  + +  N+++G         EV       GWR  R+  LP  
Sbjct: 122 IGEASK----ISLIALGVFFPVYLNLVSGIQGVDRRLLEVGWVHGYQGWRLIRHFFLPAA 177

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P ++ G  +  G  W   + +E+         + GLG  + +    G    ++  +L+ 
Sbjct: 178 LPSFIVGLRSGFGLGWMFVVAAEIMG------ASKGLGFLLTDGQTTGRPAIIIASILLF 231

Query: 563 CCFVLALNRFL 573
             F    +  L
Sbjct: 232 ALFGKLTDYLL 242



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 93/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V++  I ++           P  IV  +        L ++   T  R+    ++   
Sbjct: 19  IFIVILWQISSVNGWIAANIMPSPLKIVSTIVDLFRGGELQEHVGITLYRVSMGFLLGTA 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L    R +  +L P++  +++IP L ++   +++       K+    L   F 
Sbjct: 79  LALLLGVLNGYFRTIRYLLDPLIQALRNIPSLAWVPLFILWMGIGEASKISLIALGVFFP 138

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++         ++   +  + R L EV       GW+   +  +P ++P  +  +     
Sbjct: 139 VY--------LNLVSGIQGVDRRLLEVGWVHGYQGWRLIRHFFLPAALPSFIVGLRSGFG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
            GW FVVA+E++          G+G  +           I+ ++L       L D LL  
Sbjct: 191 LGWMFVVAAEIMGASK------GLGFLLTDGQTTGRPAIIIASILLFALFGKLTDYLLEL 244

Query: 260 -FRPMIVWSNKFR 271
             R ++ W + + 
Sbjct: 245 VGRRILRWQDSYE 257


>gi|251800143|ref|YP_003014874.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547769|gb|ACT04788.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 264

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 15/179 (8%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W+GF       + P  QLL   P     PL +    +   +      LL+  G  + +  
Sbjct: 90  WVGFSLKAERLLDPSLQLLRTLPHLAVAPLFILWFGFGETSK----ILLIAKGAFFPLYV 145

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G  +   +  +VA     T W+    +ILP   P    G   +   +W   +V+E+
Sbjct: 146 NAFLGVRSVDRNLFDVARVLEFTRWQTITKLILPASLPSLFLGIRLSIAVSWLGLVVAEM 205

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                    ++G+G  I ++        + +G+++        +  +         + L
Sbjct: 206 MG------SSSGIGYIINDARSFSLTSVIFVGIIVFAVVGKVTDSLV-----RLAEKRL 253



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 101/277 (36%), Gaps = 18/277 (6%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVH 59
           M +        +  +   +   LA +++  I +            P+DIVD     L   
Sbjct: 1   MQITRNKLALRAVHVLIGMMVPLAVLVIWQIASSNGSVNAVLIPPPKDIVDEFGRMLFSG 60

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +  R     +I      V       S +   +L P L +++++P L      
Sbjct: 61  ELLSNLRVSAGRAALGFLIGGGLGLVAGLWVGFSLKAERLLDPSLQLLRTLPHLAVAPLF 120

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E + I  I     + +  + +  + ++ R+L +V+R    + WQ 
Sbjct: 121 ILWFG--------FGETSKILLIAKGAFFPLYVNAFLGVRSVDRNLFDVARVLEFTRWQT 172

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P S+P L   + +S++  W  +V +EM+          GIG  I  A       
Sbjct: 173 ITKLILPASLPSLFLGIRLSIAVSWLGLVVAEMMGSSS------GIGYIINDARSFSLTS 226

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRLE 273
            I   ++    V  + D L+    + ++ W +    E
Sbjct: 227 VIFVGIIVFAVVGKVTDSLVRLAEKRLLRWRDSLGGE 263


>gi|307308504|ref|ZP_07588206.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           BL225C]
 gi|307317282|ref|ZP_07596722.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           AK83]
 gi|306896871|gb|EFN27617.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           AK83]
 gi|306900904|gb|EFN31513.1| choline ABC transporter, permease protein [Sinorhizobium meliloti
           BL225C]
          Length = 281

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I ++  L    + +        +  + +      Q  + T   +L+A  +S+     
Sbjct: 54  LIIIAVVTALAWWFRRSLGIAAFTCLGLLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   AA+   +  ++ PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 FGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + SF  + WQ    + +PF+MP ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     + L ++ +  + D+L 
Sbjct: 226 MVVIAALV-------GADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             ++  V     W      +  FT   +L ++  G       T+  V+    ++  + +P
Sbjct: 54  LIIIAVVTALAWWFRRSLGIAAFTCLGLLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI    R  I S ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 FGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A SF  T W+  R + LP   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +        L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272


>gi|302188523|ref|ZP_07265196.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 265

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|295320585|gb|ADG00963.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           F str. 230613]
 gi|322807562|emb|CBZ05137.1| putative ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 180

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 4/145 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL 
Sbjct: 40  EIMTNLLITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLT 99

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +                L+ F   + ++ N IAG      D+   A S     W  +  I
Sbjct: 100 IVWFGIGDG----PTIFLITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNI 155

Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522
           ILP   P  +TGA  A  G W + I
Sbjct: 156 ILPASIPDILTGARIAISGGWMSVI 180



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  ++V  ++            P+         L    +      T  R+L   + +++
Sbjct: 2   MVILIIVWYLLAEHYGNELILPTPKRTGKAFIKCLTSSEIMTNLLITLNRVLKGFMYAMI 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                       +    ++   +D ++ +PI+ ++  T+V+F               IF 
Sbjct: 62  IGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIGDGP--------TIFL 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S ++ +  +    + NI +D    +RS     W  F  + +P S+P ++    +++S
Sbjct: 114 ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAIS 173

Query: 202 GGWFFVV 208
           GGW  V+
Sbjct: 174 GGWMSVI 180


>gi|126178800|ref|YP_001046765.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
 gi|125861594|gb|ABN56783.1| binding-protein-dependent transport systems inner membrane
           component [Methanoculleus marisnigri JR1]
          Length = 258

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 10/217 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I            T  +   ++    +++    + +I A ++ +PVGI +G+       
Sbjct: 34  FILPSVTDVAGAFVTLLESGTLVADIVVSLEHFGIGLIAALLLGVPVGILMGWFRVADFL 93

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  ++L   P   + P  +                ++  G  + IL    A   + P 
Sbjct: 94  LDPIIEILRPIPPLAWIPFAIIWFGLT----TQAAGFVIFAGAFFPILTATYAAFRSVPK 149

Query: 478 DFKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            F E        T     RY+ LP   P   +G   A G  W   + +E+       +  
Sbjct: 150 VFVEAGKVLGCDTSLELIRYVALPAAIPAIASGIRIAMGVGWMCLVAAEMFG-----VSR 204

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +GLG  +  +      P VV+ +LI+    L ++R  
Sbjct: 205 SGLGYQLWHNYYLHQMPNVVVYMLILGFAGLIIDRIF 241



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 91/226 (40%), Gaps = 18/226 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D+       L+  +L      +       ++ +LL       L    R    +L PI++I
Sbjct: 41  DVAGAFVTLLESGTLVADIVVSLEHFGIGLIAALLLGVPVGILMGWFRVADFLLDPIIEI 100

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++ IP L ++ F +++F             AA F IF    + +  + Y +  ++P+   
Sbjct: 101 LRPIPPLAWIPFAIIWFGL--------TTQAAGFVIFAGAFFPILTATYAAFRSVPKVFV 152

Query: 167 EVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           E  +     +  +   Y+ +P ++P +   + ++M  GW  +VA+EM  V  +     G+
Sbjct: 153 EAGKVLGCDTSLELIRYVALPAAIPAIASGIRIAMGVGWMCLVAAEMFGVSRS-----GL 207

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF----RPMIVWS 267
           G  +        +  ++  ML +     + D++      + ++ W 
Sbjct: 208 GYQLWHNYYLHQMPNVVVYMLILGFAGLIIDRIFRNYVDQRLLRWH 253


>gi|327440574|dbj|BAK16939.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 273

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I +     L    L  +   + LR L+ + I      V   +   S +      
Sbjct: 52  LPAPSAIWNEFIFLLQQQHLLGHLQVSVLRALAGLAIGGSLGLVLGLIIGFSYKSQRAFD 111

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++ +P L      +++F      K++     A F         +  + +  + + 
Sbjct: 112 PTIQMIRMLPHLAIAPLFILWFGFGETSKLLLIAKGAFF--------PLYINTFLGIRSA 163

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L EV+R  + +  Q    L +P ++P ++  + +S+   W  +V +EM+        
Sbjct: 164 DSKLFEVARVLQFNKMQLVLKLIIPSALPHILLGLRLSVGVSWLGLVVAEMMG------S 217

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271
             GIG  I  A     +  +   ++    +  L D L+    + ++ W + F+
Sbjct: 218 TEGIGFLINDARSMSIITTVFVGIIIFALLGKLSDFLVLTVEKKLLNWQSTFK 270



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++    +++ R +  + I   + + +G+ IGF         P  Q++   P     PL 
Sbjct: 70  HLLGHLQVSVLRALAGLAIGGSLGLVLGLIIGFSYKSQRAFDPTIQMIRMLPHLAIAPLF 129

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +    +   +      LL+  G  + +  N   G  +  +   EVA        +    +
Sbjct: 130 ILWFGFGETSK----LLLIAKGAFFPLYINTFLGIRSADSKLFEVARVLQFNKMQLVLKL 185

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I+P   P+ + G   + G +W   +V+E+         T G+G  I ++        V +
Sbjct: 186 IIPSALPHILLGLRLSVGVSWLGLVVAEMMG------STEGIGFLINDARSMSIITTVFV 239

Query: 558 GVLIMCCFVLALNRFL 573
           G++I        +  +
Sbjct: 240 GIIIFALLGKLSDFLV 255


>gi|296132038|ref|YP_003639285.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296030616|gb|ADG81384.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 256

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +   +++ +VIS++ T + +TLA   R +   +   + +M  +P +  L  
Sbjct: 50  GELIDNTGFSLYLIITGLVISVVLTVILSTLAILFRTVDDFINTAVAVMDPLPGIALLPL 109

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           + A IF I  S +W M  +       +P   +EV  +  L G +
Sbjct: 110 AILWFGTG--------QKAIIFIIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPR 161

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP + P L+  + +  S  W  ++A+EM+    T     G+G YI       D+
Sbjct: 162 LVLGIMVPAAFPYLLTGVKIGWSRAWRALIAAEMVF--GTAGVSGGLGWYIYQQRYLMDI 219

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +  A++ ++ +  L + LLF
Sbjct: 220 SGVFAALVAIVIIGILVEDLLF 241



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 75/198 (37%), Gaps = 6/198 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I     +++ ++  ++I+ ++ + +         +   I     ++   P     PL
Sbjct: 50  GELIDNTGFSLYLIITGLVISVVLTVILSTLAILFRTVDDFINTAVAVMDPLPGIALLPL 109

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +  +++  T W ++ N + G    P  +KEV  +  + G R    
Sbjct: 110 AILWFGTGQK----AIIFIIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPRLVLG 165

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P  FPY +TG       AW A I +E+         + GLG YI +         V 
Sbjct: 166 IMVPAAFPYLLTGVKIGWSRAWRALIAAEMVFG--TAGVSGGLGWYIYQQRYLMDISGVF 223

Query: 557 LGVLIMCCFVLALNRFLW 574
             ++ +    + +   L+
Sbjct: 224 AALVAIVIIGILVEDLLF 241


>gi|237802225|ref|ZP_04590686.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025082|gb|EGI05138.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 265

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 97/253 (38%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   ++
Sbjct: 246 LERVCLRWHPAYQ 258


>gi|261252053|ref|ZP_05944627.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
 gi|260938926|gb|EEX94914.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio orientalis CIP 102891]
          Length = 280

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  ++ PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTIMRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  +  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  I     + F  +     +     I W+   
Sbjct: 10  PLGQWMEAGVDWLTFNAAGLFDAIAIFLETIILFVVDIFKWMPPAMPIVMTAVIAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  SIPLVLFVIGALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTIMRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  T  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELVEAGKAFGATRMKLLFKVELPAAMPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|209518161|ref|ZP_03266989.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209501368|gb|EEA01396.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 289

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 100/256 (39%), Gaps = 21/256 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLPQ 63
           + RR     + L  ++L   +  +   G +   +   I+    +  D          L  
Sbjct: 31  LRRRARAVGWHLAPWLLPATLFALWSIGCERGWIAPQILPPPQMVFDTLYDLARNGDLAH 90

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+L       L  F+       SR +   ++P  + +  IP+LG+L F ++  
Sbjct: 91  HTLVSLQRVLLGFGAGTLAGFMIGAALGLSRTVEAYVLPGFNALVQIPVLGWLPFLLLLV 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P K I         I  + +  +T S  Q     P  L+E +R F    WQ+  Y+
Sbjct: 151 GVGEPLKYI--------LIAHAALVPVTLSTMQGFRQTPAALDEAARVFGYGRWQRIAYV 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P L   + ++ +  W  +V  E++   +      G+G  I    +   L  ++ 
Sbjct: 203 VLPAAVPTLATGVRLAFTKAWLALVVVELVASSE------GLGYLIVYGRQLFQLDLVMA 256

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  + F  + LL
Sbjct: 257 SVVIVGAIGFAINCLL 272



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 17/275 (6%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           +SP +        +    + +             ++  L       +  +     W +  
Sbjct: 8   WSPAAAQAAAQVASEAKAQANANLRRRARAVGWHLAPWLLPATLFALWSIGCERGWIAPQ 67

Query: 366 YIVNHFTYQDVLY-------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            +       D LY       +     +++ RV++     ++    +G  +G    + + +
Sbjct: 68  ILPPPQMVFDTLYDLARNGDLAHHTLVSLQRVLLGFGAGTLAGFMIGAALGLSRTVEAYV 127

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P    L   P   + P ++  V            +L+       +  + + G    P  
Sbjct: 128 LPGFNALVQIPVLGWLPFLLLLVGVG----EPLKYILIAHAALVPVTLSTMQGFRQTPAA 183

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E A  F    W+   Y++LP   P   TG   A   AW A +V E+ +       + G
Sbjct: 184 LDEAARVFGYGRWQRIAYVVLPAAVPTLATGVRLAFTKAWLALVVVELVA------SSEG 237

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG  I    +      V+  V+I+     A+N  L
Sbjct: 238 LGYLIVYGRQLFQLDLVMASVVIVGAIGFAINCLL 272


>gi|148257687|ref|YP_001242272.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409860|gb|ABQ38366.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 258

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 10/176 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
              ++   +T++RVV   ++AS+I +P+G+ +G    I + ++PF       PA+ F PL
Sbjct: 59  FGFLYDIGMTVWRVVGGFVLASVIAVPLGLLMGAYKPIEAFLEPFVSFARYLPASAFIPL 118

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L       L++  G+ + I+  +         D  E A +   +       
Sbjct: 119 LILWAGIGELQK----LLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIGR 174

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++LP   P          G AW   IV+E+         ++G+G  I +S    + 
Sbjct: 175 VLLPSAAPDIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNT 224



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 80/211 (37%), Gaps = 15/211 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T  R++   V++ +       L    + +   L P +   + +P   F+   ++
Sbjct: 62  LYDIGMTVWRVVGGFVLASVIAVPLGLLMGAYKPIEAFLEPFVSFARYLPASAFIPLLIL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            EL  +  IF   V+ +   +  ++ N  RDL E + +   S      
Sbjct: 122 WAGIG--------ELQKLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIG 173

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P +   + + +   W +V+ +E+I          GIG  I  +    +   I
Sbjct: 174 RVLLPSAAPDIAEILRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQI 227

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
           ++ ++ +  +  + D  LF+    W   ++L
Sbjct: 228 IFGIIVIGLIGLISD-FLFKAFNAWLFPWKL 257


>gi|240140551|ref|YP_002965031.1| ABC transporter, permease [Methylobacterium extorquens AM1]
 gi|240010528|gb|ACS41754.1| ABC transporter, permease [Methylobacterium extorquens AM1]
          Length = 353

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y 
Sbjct: 161 SIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD 220

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      R  R +I+P + P 
Sbjct: 221 GPK----IAIIVIGTFFQQVLVIANTTRRVDPLLIEAALTMGSRNLRLIRRVIVPAVLPQ 276

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   +L++   
Sbjct: 277 IYRDQRILLGWAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLV 330

Query: 566 VLALNR---FLWHPLYLYGT 582
            +A +     L   L+ Y  
Sbjct: 331 GIATDIVLALLGRRLFPYAR 350



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +   P   D   LP     +   +     +S L       L      +  +  P+++ ++
Sbjct: 142 LTAPPPQRDTIWLPASLWHSIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFVR 201

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            +P   F    V         K        I  I     +     +  +   +   L E 
Sbjct: 202 YLPAPAFGALMVAILGIYDGPK--------IAIIVIGTFFQQVLVIANTTRRVDPLLIEA 253

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + +      +    + VP  +P +  +  + +   W +++ +E+I          GI  +
Sbjct: 254 ALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLGWAWTYLIVAELIGTSS------GITFF 307

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           I    + Q    +  A+L +  V    D    LL R +  ++
Sbjct: 308 ITQQARYQHFDNVYAAILVIGLVGIATDIVLALLGRRLFPYA 349


>gi|90410103|ref|ZP_01218120.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
 gi|90329456|gb|EAS45713.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T + +LSA + S++        AA    L  ++ PILD+MQ+IP   +L  T+V
Sbjct: 90  WEEMIETFVLVLSATMFSVIVGVPIGIAAAHKPWLYTIMRPILDLMQTIPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  R+F  S  +  +
Sbjct: 150 LFGL---GVVPGLISTIIFAIAAP-----IRLTYLGISRVPEELVEAGRAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV S ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPNIMAGITQCIMLSLSMVVISALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 105/281 (37%), Gaps = 25/281 (8%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
             F+ ++ Y++  FF  LS  ++ +   L V  F +    + +     +++ L      V
Sbjct: 16  ATFVDWLTYNASGFFDSLSYTLESMI-MLLVDLFKWFPPAVPIVMTALLAWFLHRSLSLV 74

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  VA  +   ++GY      +++++    L       V+   + + I+ +P+GI    +
Sbjct: 75  IFVVAALLLIMNLGY------WEEMIETFVL-------VLSATMFSVIVGVPIGIAAAHK 121

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G
Sbjct: 122 PWLYTIMRPILDLMQTIPTFVYL---IPTLVLFGLGVVPGLISTIIFAIAAPIRL-TYLG 177

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S  P +  E   +F  +  +    + LP   P  + G       + +  ++S +     
Sbjct: 178 ISRVPEELVEAGRAFGASRMKLLFKVELPAAMPNIMAGITQCIMLSLSMVVISALVG--- 234

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ----ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|228986011|ref|ZP_04146156.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228773723|gb|EEM22144.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLE 273
           L    + W + F+ E
Sbjct: 265 LEVKFLRWRDNFKGE 279



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L       V  + I         +        +   +    +     +   +  S+  
Sbjct: 29  KVLVRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFR 88

Query: 402 IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
              G +IG            F       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262


>gi|327188279|gb|EGE55499.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 558

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 99/266 (37%), Gaps = 10/266 (3%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
               +  L++     V  +L + W+  V    +          V +    D   +     
Sbjct: 296 ARRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFW 355

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T     + +++A +  +   I++     I     P A +L   P     PL++     Y
Sbjct: 356 VTTKITFLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILI----Y 411

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  + L +       + IL N++ G  +  ++   +   +  + W+   Y+ LP   P
Sbjct: 412 APSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLYLKLPAAQP 471

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y++TG     G A  A++V+E A+          L   + E+  + + P +   +L++  
Sbjct: 472 YFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSL 529

Query: 565 FVLALNRFL----WHPLYLYGTRCLR 586
             +A+        W  L+ +    L+
Sbjct: 530 LGVAIFALTSFISWLALHRWHESSLK 555



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 92/251 (36%), Gaps = 14/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +++I    + L G+    +P           D  +L      TT     +++++L+
Sbjct: 311 VIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKITFLSLMLALV 370

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A    +SR + +   P+  I+Q  PI+      ++Y            ++A +  
Sbjct: 371 GGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIY--------APSTQVALLIC 422

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  +M Q L ++  +L  +   +  S WQ   YL +P + P  +  + +   
Sbjct: 423 AFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLRIGGG 482

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM----LGVIFLYDQ 257
                 V +E             +   +  A    ++  +  A+L +    + +  L   
Sbjct: 483 LALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAIFALTSF 540

Query: 258 LLFRPMIVWSN 268
           + +  +  W  
Sbjct: 541 ISWLALHRWHE 551


>gi|104781566|ref|YP_608064.1| amino acid transporter permease [Pseudomonas entomophila L48]
 gi|95110553|emb|CAK15261.1| putative amino acid transporter permease protein [Pseudomonas
           entomophila L48]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +T   +L +  + +L       L A       +L+P+LD+MQ++P   +L   
Sbjct: 90  GLWDKLLQTLALVLVSTSLCVLVGVPLGILLATRPLARRLLLPVLDVMQTLPAFVYLIPV 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           ++ A+FA     +  +       L  I   L + +       WQ+
Sbjct: 150 LMLFGLG--------KVPAVFATLIYALPPLVRLTELGLAQIDPSLLKAAHGLGAGRWQR 201

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  S+      VV + MI          G+G  +   I+  ++ 
Sbjct: 202 LSRIALPLALPSIMAGLNQSVMMALSMVVVASMI-------GARGLGEDVLAGIQTLNVG 254

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  + D++
Sbjct: 255 QGMEAGLAIVALAMVIDRI 273



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 11/198 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
            VL +      T+  V+V   +  ++ +P+GI +  RP     + P   ++   PA V+ 
Sbjct: 87  GVLGLWDKLLQTLALVLVSTSLCVLVGVPLGILLATRPLARRLLLPVLDVMQTLPAFVYL 146

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             V+           +      +      ++     G +       + A       W+  
Sbjct: 147 IPVLMLFGLG----KVPAVFATLIYALPPLVRLTELGLAQIDPSLLKAAHGLGAGRWQRL 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I LP   P  + G   +   A +  +V+ +           GLG  +    +  +  +
Sbjct: 203 SRIALPLALPSIMAGLNQSVMMALSMVVVASMIG-------ARGLGEDVLAGIQTLNVGQ 255

Query: 555 VVLGVLIMCCFVLALNRF 572
            +   L +    + ++R 
Sbjct: 256 GMEAGLAIVALAMVIDRI 273


>gi|254251311|ref|ZP_04944629.1| hypothetical protein BDAG_00492 [Burkholderia dolosa AUO158]
 gi|124893920|gb|EAY67800.1| hypothetical protein BDAG_00492 [Burkholderia dolosa AUO158]
          Length = 340

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 82/237 (34%), Gaps = 16/237 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   A    W +     +H   Q  L +      +  RV    ++A+ I +P GI 
Sbjct: 112 WLPPLFLPAPEAVWAAF-VDASHGRIQGGLPLSEHLLWSAARVFGAFVLAAAIGVPAGIL 170

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G        + P  +     P   + PLVV               +++       I   
Sbjct: 171 MGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI----DETAKLVVIFLACFAPIAMA 226

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG  A   +    A S   +  +  R+++LP   P  +TG   A G  W   + +E+ 
Sbjct: 227 ARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMV 286

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +       T GLG  +  ++       VV+G+LI+       +  +      +  R 
Sbjct: 287 A------ATAGLGQMVLNASSFLRTDIVVMGILIIGAIAWLFDLAM-----RWVERR 332



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A V++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 142 LSEHLLWSAARVFGAFVLAAAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 201

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 202 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 253

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 254 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 307

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 308 VVMGILIIGAIAWLFDLAMRWVERRVVPWKGR 339


>gi|118443723|ref|YP_879094.1| glycine betaine/carnitine/choline ABC transporter [Clostridium
           novyi NT]
 gi|118134179|gb|ABK61223.1| probable glycine betaine/carnitine/choline ABC transporter
           [Clostridium novyi NT]
          Length = 528

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     L+++ +++L       L ++ ++L   ++ + +++Q++P L  L F +    
Sbjct: 19  LIQHIGLTLASVAVAILIGVPLGILISRKKKLSGPVIGVANVIQAVPSLALLGFLIPILG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+F +F   +  +  + Y  L +I  D+ E +    L+  QK   + 
Sbjct: 79  IG--------STPAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPAQKLKMVQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  + ++       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLAMPIIMAGIRIA------AVTAVGLMTIAAF-IGAGGLGYMVFTGVQRVNNYMILAG 183

Query: 245 MLTMLGVIFLYDQL 258
            +    +  L D +
Sbjct: 184 AIPSGILALLMDYI 197



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 11/182 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + +A +I +P+GI I  +  +S  +   A ++ A P+      ++  +       + 
Sbjct: 27  LASVAVAILIGVPLGILISRKKKLSGPVIGVANVIQAVPSLALLGFLIPILGIG----ST 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++   +   I+ N   G S+   D  E A    +T  +  + + LP   P  + G 
Sbjct: 83  PAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPAQKLKMVQLPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    ++ +   ++ G +      L ++
Sbjct: 143 RIAAVTAVGLMTIAAFIGAG-------GLGYMVFTGVQRVNNYMILAGAIPSGILALLMD 195

Query: 571 RF 572
             
Sbjct: 196 YI 197


>gi|167562868|ref|ZP_02355784.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167570055|ref|ZP_02362929.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 272

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 12/258 (4%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQ 374
            R+             +  +   V  +L + W       A+   +  + +  +   +   
Sbjct: 4   TRSSSGFATRRAGQAARAIAPWLVPLVLALAWELGARSGALSNRVLPEPLAVVRAAWALV 63

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +     ++ +R +V   I   + + +G+  G        +    Q++   PA    
Sbjct: 64  ESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMI 123

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+  G  + I  N   G  +      E+A S+ + G+  +
Sbjct: 124 PLVILWFGI----DEKAKLFLVALGVFFPIYINTYHGIRSVDAGLVEMARSYGVKGFALY 179

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +ILPG  P  + G   A G  W   IV+E  S        +G+G     + E      
Sbjct: 180 RDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDV 233

Query: 555 VVLGVLIMCCFVLALNRF 572
           VV+G+L+        +  
Sbjct: 234 VVVGILLYAALGKLADVL 251



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 22/256 (8%)

Query: 24  AFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
              LV+ +   L         +    P  +V      ++   +      +T R L    I
Sbjct: 26  LVPLVLALAWELGARSGALSNRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAI 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                         S+   + L   + ++++IP L  +   +++F           E A 
Sbjct: 86  GGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAK 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F +     + +  + Y  + ++   L E++RS+ + G+  +  + +P ++P ++  +  
Sbjct: 138 LFLVALGVFFPIYINTYHGIRSVDAGLVEMARSYGVKGFALYRDVILPGALPSILVGVRF 197

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W  ++ +E I          GIG     A +      ++  +L    +  L D L
Sbjct: 198 ALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVL 251

Query: 259 ---LFRPMIVWSNKFR 271
              L R  + W   ++
Sbjct: 252 AKWLERATLRWHPAYQ 267


>gi|288961773|ref|YP_003452083.1| glycine betaine/proline transport system permease protein
           [Azospirillum sp. B510]
 gi|288914053|dbj|BAI75539.1| glycine betaine/proline transport system permease protein
           [Azospirillum sp. B510]
          Length = 299

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 87/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    T   +L++ ++SL+          +SR    V   +LD+MQ++P   +L   
Sbjct: 96  GLWESTVSTLGLVLASTMLSLVGGVPLGIWMTRSRIADAVGRTLLDLMQTMPAFVYLIPA 155

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     +FA+  +            +  +P +L E  R+F     Q 
Sbjct: 156 VLFFGL---GRVPGIIATVVFAMPPA-----VRLTVLGIRQVPAELVEAGRAFGCRDHQL 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  +M      +V + MI  G       G+G+ +   I+  D+ 
Sbjct: 208 LFKVQLPNALPSIMAGVNQTMMMALSMIVVASMIGAG-------GLGNVVLQGIQRLDIG 260

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + + L ++ +  + D++
Sbjct: 261 LGVQSGLAVVLLAVVLDRI 279



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 11/167 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   +++ +  +P+GIW+       +  +    L+   PA V+    V       
Sbjct: 104 TLGLVLASTMLSLVGGVPLGIWMTRSRIADAVGRTLLDLMQTMPAFVYLIPAVLFFGLGR 163

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  +           + G    P +  E   +F     +    + LP   P 
Sbjct: 164 VPGIIATVVFAMPPAVRL----TVLGIRQVPAELVEAGRAFGCRDHQLLFKVQLPNALPS 219

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            + G       A +  +V+ +   G       GLG  + +  ++   
Sbjct: 220 IMAGVNQTMMMALSMIVVASMIGAG-------GLGNVVLQGIQRLDI 259


>gi|255283392|ref|ZP_05347947.1| ABC transporter, permease protein [Bryantella formatexigens DSM
           14469]
 gi|255266040|gb|EET59245.1| ABC transporter, permease protein [Bryantella formatexigens DSM
           14469]
          Length = 266

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           + +I     +M R +   + +  + +  G+ +G+ P + + + P  QLL       + P 
Sbjct: 58  ITLIGHLRASMIRFLAGYLASVGLGVLSGLLLGWFPAVFAYVNPVIQLLRPIAPVAWLPF 117

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  V       ++    ++     + +L +  A        + +VA +F ++       
Sbjct: 118 IVLWVGIG----DVPAIAIIFIAGFFPVLLSTAAAVKNVDRVYLKVAENFRLSQPETLLK 173

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ P +FP   +    A G  W   +  E+          TGLG  + ++        ++
Sbjct: 174 IVFPAVFPQIASSLHMALGTCWIFLVSGEMVG------SQTGLGFLVMDAKNCIRADALL 227

Query: 557 LGVLIMCCFVLALNRFL 573
             +L +    LAL+  +
Sbjct: 228 AVMLTIGLVGLALDFLI 244



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 14/205 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +    +L  +   + +R L+  + S+    +   L      +   + P++ +++ I  + 
Sbjct: 54  SSSQITLIGHLRASMIRFLAGYLASVGLGVLSGLLLGWFPAVFAYVNPVIQLLRPIAPVA 113

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L F V++            ++ AI  IF +  + +  S   ++ N+ R   +V+ +FRL
Sbjct: 114 WLPFIVLWVGIG--------DVPAIAIIFIAGFFPVLLSTAAAVKNVDRVYLKVAENFRL 165

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    +  P   P +  ++ M++   W F+V+ EM+          G+G  +  A  
Sbjct: 166 SQPETLLKIVFPAVFPQIASSLHMALGTCWIFLVSGEMVG------SQTGLGFLVMDAKN 219

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
                A+L  MLT+  V    D L+
Sbjct: 220 CIRADALLAVMLTIGLVGLALDFLI 244


>gi|54303410|ref|YP_133403.1| putative permease of ABC transporter [Photobacterium profundum SS9]
 gi|46916840|emb|CAG23603.1| putative permease of ABC transporter [Photobacterium profundum SS9]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T + +LSA + S++        AA    L  ++ PILD+MQ+IP   +L  T+V
Sbjct: 90  WEEMIETFVLVLSATMFSVIVGVPIGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  R+F  S  +  +
Sbjct: 150 LFGL---GVVPGLISTIIFAIAAP-----IRLTYLGISRVPEELVEAGRAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV S ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPNIMAGITQCIMLSLSMVVISALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 105/281 (37%), Gaps = 25/281 (8%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
             F+ ++ Y++  FF  LS  ++ +   L V  F +    + +     +++ L      V
Sbjct: 16  ATFVDWLTYNASGFFDSLSYTLESMI-MLLVDLFKWFPPAVPIVMTALLAWFLHRSLSLV 74

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  VA  +   ++GY      +++++    L       V+   + + I+ +P+GI    R
Sbjct: 75  IFVVAALLLIMNLGY------WEEMIETFVL-------VLSATMFSVIVGVPIGIAAAHR 121

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G
Sbjct: 122 PWLYTIMRPILDLMQTIPTFVYL---IPTLVLFGLGVVPGLISTIIFAIAAPIRL-TYLG 177

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S  P +  E   +F  +  +    + LP   P  + G       + +  ++S +     
Sbjct: 178 ISRVPEELVEAGRAFGASRMKLLFKVELPAAMPNIMAGITQCIMLSLSMVVISALVG--- 234

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ----ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|315178683|gb|ADT85597.1| hypothetical permease of ABC transporter [Vibrio furnissii NCTC
           11218]
          Length = 280

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  ++F      + I +   L   +  +      +    + +      Q    T + + +
Sbjct: 41  VLVDVFKWFPPAVPIIVTAALAWWLHRSLSLVIFIIAALLLILNLGYWQEMLETFVLVFA 100

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A  IS+L       +AA    +  V+ PILD+MQ++P   +L  T+V F     G V G 
Sbjct: 101 ATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGL 157

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFAI            Y  +  +P  L E  ++F  S  +  + + +P ++P ++ 
Sbjct: 158 ISTIIFAIAAP-----IRLTYLGVTRVPEALIEAGKAFGASNMKLLFKVELPAALPSIMA 212

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   +      VV + ++          G+G  +  A+   ++     A L ++ V  +
Sbjct: 213 GITQCIMLSLSMVVIAALV-------GADGLGKPVIRALNTVNISQGFEAGLAIVLVAII 265

Query: 255 YDQL 258
            D+L
Sbjct: 266 LDRL 269



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 18/283 (6%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
            K     ++           S     +   L  I     + F        +     + W+
Sbjct: 5   HKIPLGHWMEAGVDWLTLHASGFFDAISFLLESIIMVLVDVFKWFPPAVPIIVTAALAWW 64

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                  +     ++  I+N   +Q++L    L       V     I+ +I +P+GI   
Sbjct: 65  LHRSLSLVIFIIAALLLILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAA 117

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP + + ++P   L+   P  V+    +  +  + L     L   +IF     I     
Sbjct: 118 HRPWMYTVMRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TY 173

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G +  P    E   +F  +  +    + LP   P  + G       + +  +++ +   
Sbjct: 174 LGVTRVPEALIEAGKAFGASNMKLLFKVELPAALPSIMAGITQCIMLSLSMVVIAALVG- 232

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   GLG  +  +    +  +     L +    + L+R 
Sbjct: 233 ------ADGLGKPVIRALNTVNISQGFEAGLAIVLVAIILDRL 269


>gi|148265899|ref|YP_001232605.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
 gi|146399399|gb|ABQ28032.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter uraniireducens Rf4]
          Length = 262

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 12/214 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF LL      G+    L        P  +V           L      + +R  +   +
Sbjct: 21  IFPLLILAAWWGLARWELVPPMFLPTPGKVVTAFISLWKEGVLAFNLKVSFIRFFAGTFL 80

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F+   L    R L  ++ P+ + ++ +P+L ++   +++           AE + 
Sbjct: 81  GITAGFLLGMLFGMFRTLEKLVAPLFNAIRQVPLLAWIPLIIIFCGI--------AEASK 132

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF I     + +  S +  +  + ++  EV R F     +    + +P  +P LV  + M
Sbjct: 133 IFFIALGCSFPIVLSTFDGIRGVRKEYVEVGRVFGFGRIRLIRKIFLPSVLPSLVTGLRM 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S++ GW  +VA+E+ +         GIG+ I   
Sbjct: 193 SLNIGWGQLVAAELFMF----TQAGGIGNMIGQG 222



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 17/216 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI---------GYIVNHFTYQDVLYVIWLGCITMFR 389
           R      IF   ++        W+ +           +    +      + +   ++  R
Sbjct: 14  RKISRGIIFPLLILAAWWGLARWELVPPMFLPTPGKVVTAFISLWKEGVLAFNLKVSFIR 73

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
                 +       +G+  G    +   + P    +   P   + PL++        +  
Sbjct: 74  FFAGTFLGITAGFLLGMLFGMFRTLEKLVAPLFNAIRQVPLLAWIPLIIIFCGIAEASK- 132

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 +  G  + I+ +   G      ++ EV   F     R  R I LP + P  VTG
Sbjct: 133 ---IFFIALGCSFPIVLSTFDGIRGVRKEYVEVGRVFGFGRIRLIRKIFLPSVLPSLVTG 189

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +    W   + +E+  +     +  G+G  I +
Sbjct: 190 LRMSLNIGWGQLVAAELFMF----TQAGGIGNMIGQ 221


>gi|229156500|ref|ZP_04284591.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus ATCC 4342]
 gi|228627003|gb|EEK83739.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus ATCC 4342]
          Length = 282

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSRRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLE 273
           L    + W + F+ E
Sbjct: 265 LEVKFLRWRDNFKGE 279



 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L       V  + I         +        +   +    +     +   +  S+  
Sbjct: 29  KVLVRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFR 88

Query: 402 IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
              G +IG            F       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSRRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262


>gi|256379427|ref|YP_003103087.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255923730|gb|ACU39241.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 269

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++    IA+++ + +G+ +G          P    + + P     P+ +   +   
Sbjct: 68  SLTRLLTGWGIAAVVGVALGLALGRSARAMEYAGPVLTFMRSIPPPALVPVFLLLFNIGT 127

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                     ++FG  W IL N + GA +  +   E +  F I   +W   ++LP   P 
Sbjct: 128 SMQLAT----IVFGVLWPILLNTVDGARSVDSTKTETSEVFRIPRAQWVLGVVLPSAAPK 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   +   +    +VSE+           G+G+ +  +  +  FP +  G++++   
Sbjct: 184 IFAGLRVSLSLSLVLMVVSELVG------TDNGIGSQLLLAQRQFDFPGMWAGIVLLGVL 237

Query: 566 VLALNRFL 573
              LN  L
Sbjct: 238 GYTLNTVL 245



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   +  R+L+   I+ +          +S R      P+L  M+SIP    +   ++ 
Sbjct: 63  EHLVPSLTRLLTGWGIAAVVGVALGLALGRSARAMEYAGPVLTFMRSIPPPALVPVFLLL 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F               +  I    +W +  +      ++     E S  FR+   Q    
Sbjct: 123 FNIG--------TSMQLATIVFGVLWPILLNTVDGARSVDSTKTETSEVFRIPRAQWVLG 174

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +   + +S+S     +V SE++   +      GIGS + LA ++ D   + 
Sbjct: 175 VVLPSAAPKIFAGLRVSLSLSLVLMVVSELVGTDN------GIGSQLLLAQRQFDFPGMW 228

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             ++ +  + +  + +L       + W  K
Sbjct: 229 AGIVLLGVLGYTLNTVLLALENRALAWQPK 258


>gi|300694481|ref|YP_003750454.1| binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299076518|emb|CBJ35843.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 298

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 96/286 (33%), Gaps = 16/286 (5%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +S         +   R    E  L L         L      VV  +A     + +   +
Sbjct: 14  ISARAPVYRTPVAFERIGVVEKPLSLAERLYGQVWLRKLAILVVLALAWEGGARWLDNPL 73

Query: 369 NHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKI 418
              T+ D    +W G    T+F  +   +   +    +G+ +                 +
Sbjct: 74  LLPTFSDTAQALWAGLADGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQDFL 133

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +    +    PA    P+ +        +    L  +++    W +  N  AG  +  N 
Sbjct: 134 ETLTAMFNPLPAIALLPIALVWFGLGSGS----LIFVIVHSVVWAVSLNTHAGFLSVSNT 189

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +     G
Sbjct: 190 LRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQGG 247

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           LG YI E+  +   PEV  G+L +    L +   ++  L     + 
Sbjct: 248 LGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVKR 293



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L        L          D    +   L   +L      +   +L+   + L 
Sbjct: 55  LVVLALAWEGGARWLDNPLLLPTFSDTAQALWAGLADGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   SR     L  +  +   +P +  L   +V+F             + IF 
Sbjct: 115 LSCALVVLGIGSRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGSG--------SLIFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++    +     G+G YI     +  +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVFGVSS--GQGGLGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292


>gi|239627741|ref|ZP_04670772.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517887|gb|EEQ57753.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 262

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 79/198 (39%), Gaps = 12/198 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMV 77
           + +F L    I       + T  P  ++ ++  +       +++  +   +  R+L    
Sbjct: 20  IASFFLAWAFITTFTAAGETTPGPVQVIRLLFTSFFEPIGRYTIYGHLYYSLRRVLVGYT 79

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ +   V       SR    ++ P+ ++++ IP + ++   +++F           EL 
Sbjct: 80  VAAVSGIVVGLSMGTSRYAEAIIKPLFELIRPIPPIAWIPLVILWFGVG--------ELP 131

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               IF     N+T + Y     +   L   +R    S    F  + +P S+P +   M 
Sbjct: 132 KYAIIFIGSFTNITLNAYTGAQRVDPTLIGCARMLGTSDRDIFLRVILPSSLPQIFAGMQ 191

Query: 198 MSMSGGWFFVVASEMIVV 215
           +++S  W  V+A+EM+  
Sbjct: 192 VALSTAWMAVLAAEMVGA 209



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 10/168 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+V   +A++  I VG+ +G   +  + I+P  +L+   P   + PLV+       
Sbjct: 70  SLRRVLVGYTVAAVSGIVVGLSMGTSRYAEAIIKPLFELIRPIPPIAWIPLVILWFGVGE 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L        ++  G+   I  N   GA          A     +    +  +ILP   P 
Sbjct: 130 L----PKYAIIFIGSFTNITLNAYTGAQRVDPTLIGCARMLGTSDRDIFLRVILPSSLPQ 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              G   A   AW A + +E+           G G  I   ++  + P
Sbjct: 186 IFAGMQVALSTAWMAVLAAEMVG------AQEGCGWIILRGSDTINIP 227


>gi|149188392|ref|ZP_01866685.1| putative permease of ABC transporter [Vibrio shilonii AK1]
 gi|148837610|gb|EDL54554.1| putative permease of ABC transporter [Vibrio shilonii AK1]
          Length = 280

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  +  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELVEAGKAFGATRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  I     + F  +     +     I W+   
Sbjct: 10  PLGQWMEAGVDWLTFNAAGLFDAISIFLETIILFVVDVFKWMPPAMPIIMTAAIAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  SIPLVLFVIGALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  T  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELVEAGKAFGATRMKLLFKVELPAAMPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|260426820|ref|ZP_05780799.1| ABC transporter, membrane subunit [Citreicella sp. SE45]
 gi|260421312|gb|EEX14563.1| ABC transporter, membrane subunit [Citreicella sp. SE45]
          Length = 274

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 84/257 (32%), Gaps = 13/257 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTY 373
                V RF              VS++  +  + VV    +    I              
Sbjct: 12  RPKPPVARFAQLSAVGTAVGLPMVSFLFILALWSVVGASGVVSEAIFPAPWSVWSATVEM 71

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     +++ R  V   I + + + +G+  G    + + + PF  LL   PA   
Sbjct: 72  WQNGTLQKDLGVSLGRAGVGFAIGATLGVTMGLLTGRVALVRTLLNPFLNLLRPIPAIAL 131

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +        +    +S  +   T W   FN   G    P  +   A S   +  R 
Sbjct: 132 VPVAIVWFGIGEGSKYFVVSYTVFL-TVW---FNTHHGMQYVPETYLRAARSLGASRLRE 187

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  ++LP   P+   G       A+ + + +E+         ++GLG  + E+ +     
Sbjct: 188 FLTVVLPAAAPHIFAGIRLGVALAFLSLVAAEL------SGASSGLGFRLQEARQYIRTD 241

Query: 554 EVVLGVLIMCCFVLALN 570
            +   ++I+       +
Sbjct: 242 RMFSLLIILGILGAVAD 258



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 90/244 (36%), Gaps = 18/244 (7%)

Query: 22  LLAFVLVIGIINILLHGIQET----TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +++F+ ++ + +++      +      P  +           +L +    +  R      
Sbjct: 34  MVSFLFILALWSVVGASGVVSEAIFPAPWSVWSATVEMWQNGTLQKDLGVSLGRAGVGFA 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I          L  +   +  +L P L++++ IP +  +   +V+F      K       
Sbjct: 94  IGATLGVTMGLLTGRVALVRTLLNPFLNLLRPIPAIALVPVAIVWFGIGEGSKY------ 147

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +  +    + F+ +  +  +P      +RS   S  ++F  + +P + P +   + 
Sbjct: 148 --FVVSYTVFLTVWFNTHHGMQYVPETYLRAARSLGASRLREFLTVVLPAAAPHIFAGIR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + ++  +  +VA+E+           G+G  +  A +      +   ++ +  +  + D 
Sbjct: 206 LGVALAFLSLVAAEL------SGASSGLGFRLQEARQYIRTDRMFSLLIILGILGAVADL 259

Query: 258 LLFR 261
           ++ R
Sbjct: 260 VVHR 263


>gi|218904035|ref|YP_002451869.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus AH820]
 gi|228915510|ref|ZP_04079099.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|218536004|gb|ACK88402.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus AH820]
 gi|228844157|gb|EEM89217.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 282

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 18/256 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLER 274
           L    + W + F+ E 
Sbjct: 265 LEVKFLRWRDSFKGET 280



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L       V  + I         +        +   +    +     +   +  S+  
Sbjct: 29  KVLIRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFR 88

Query: 402 IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
              G +IG            F       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262


>gi|126735115|ref|ZP_01750861.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseobacter sp. CCS2]
 gi|126715670|gb|EBA12535.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseobacter sp. CCS2]
          Length = 277

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
               + +   +LS+ V+ +          A   R    + P+LD+MQ++P   +L   +V
Sbjct: 90  WDETTDSLALVLSSCVVCMGLGVPIGIFLAHRPRAYQAVSPVLDLMQTLPAFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF +            Y  + N P  L E + +F  +  Q+ W
Sbjct: 150 FFGL---GMVPGLFATVIFVLPAP-----IRLTYLGVSNTPTSLLEAAEAFGATPAQRLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +   +      VV S  +          G+G  +  A+   D    
Sbjct: 202 KVELPYAVPQIMAGLNQVIMLSLSMVVISAYVGAN-------GLGKPVVQALGRNDPGLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             + L ++ V  + D++L
Sbjct: 255 FESGLVIVAVAIMLDRML 272



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 97/281 (34%), Gaps = 25/281 (8%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
           N + ++  +    F  +S+ +  +   +  I    P   + + +   ++++L   W   +
Sbjct: 17  NAVDWLKENGRPAFDAVSDGLDFMIDGIVWI-LQTPPEAVVIAAFILLTWVLQRSWKVCL 75

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
              A       + +++N   + +          ++  V+   ++   + +P+GI++  RP
Sbjct: 76  LVFAC------LLFVLNQGYWDETTD-------SLALVLSSCVVCMGLGVPIGIFLAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                + P   L+   PA V+    +       +       + ++      I      G 
Sbjct: 123 RAYQAVSPVLDLMQTLPAFVYLIPAIVFFGLGMVPGLFATVIFVLPA---PIRL-TYLGV 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           S  P    E A +F  T  +    + LP   P  + G       + +  ++S        
Sbjct: 179 SNTPTSLLEAAEAFGATPAQRLWKVELPYAVPQIMAGLNQVIMLSLSMVVISAYVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG  + ++  +          L++    + L+R L
Sbjct: 235 ---ANGLGKPVVQALGRNDPGLGFESGLVIVAVAIMLDRML 272


>gi|330980660|gb|EGH78763.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 265

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|330891647|gb|EGH24308.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 265

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWLLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
            R+ P    +L   + +  ++      +    P  +++     +    +  + + +  R 
Sbjct: 11  HRLAPWALPVLLLAVWLLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                I          +   S+    +L   + +++++P L  +   +++F         
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID------ 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A IF +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP +
Sbjct: 125 --ETAKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSI 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++ A++    + 
Sbjct: 183 LVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLG 236

Query: 253 FLYD---QLLFRPMIVWSNKFRL 272
            L D   + L R  + W   +++
Sbjct: 237 KLADLAARGLERVCLRWHPAYQV 259


>gi|170758692|ref|YP_001788569.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405681|gb|ACA54092.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 180

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 4/145 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT+ RV+   + A II +P+G+++G     ++ I  F   +   P   + PL 
Sbjct: 40  EIMTNLLITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLT 99

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +                L+ F   + ++ N IAG      D+   A S     W  +  I
Sbjct: 100 IVWFGIGDG----PTIFLIAFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNI 155

Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522
           ILP   P  +TGA  A  G W + I
Sbjct: 156 ILPASIPDILTGARIAISGGWMSVI 180



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  ++V  ++            P+         L    +      T  R+L   + +++
Sbjct: 2   IVILIIVWYLLAEHYGNELVLPTPKRTGKAFIKCLTSSEIMTNLLITLNRVLKGFMYAMI 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                       +    ++   +D ++ +PI+ ++  T+V+F               IF 
Sbjct: 62  IGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIGDGP--------TIFL 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S ++ +  +    + NI +D    +RS     W  F  + +P S+P ++    +++S
Sbjct: 114 IAFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAIS 173

Query: 202 GGWFFVV 208
           GGW  V+
Sbjct: 174 GGWMSVI 180


>gi|114769478|ref|ZP_01447104.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
 gi|114550395|gb|EAU53276.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
          Length = 343

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 14/193 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +L   +IS L         +K  RL   ++P+LD++Q++P   +L   +  F 
Sbjct: 149 AMQTFAVILVCTIISALLGVPIGIAMSKYNRLQRAIIPVLDLLQTLPTFVYLIPLIFLF- 207

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  IG       AI    +  +       +  + +D+ E   +F +S  QK   + 
Sbjct: 208 ------PIGESRLYGIAIVLYAIVPVIRLTDLGVRLVDKDVVEAGNAFGMSPAQKLGKVE 261

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + M+         PG+G  +   I+  +L   L A
Sbjct: 262 LPLALPNIMAGLNQTIMMSLAMVVIASMVT-------APGLGVLVLRGIRNLELGVGLMA 314

Query: 245 MLTMLGVIFLYDQ 257
            + ++ +  + D+
Sbjct: 315 GVCIVLLAVMLDR 327



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    I    ++       +   + +     ++   +        T   ++V  II+++
Sbjct: 106 TAPWFLIMAVMLIAVWYATYSLSVVIFNAFCLSFFAFVDHFEPAMQTFAVILVCTIISAL 165

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +     +   I P   LL   P  V+    +  +  + +  +    + ++  
Sbjct: 166 LGVPIGIAMSKYNRLQRAIIPVLDLLQTLPTFVYL---IPLIFLFPIGESRLYGIAIVLY 222

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E  ++F ++  +    + LP   P  + G       +  
Sbjct: 223 AIVPVIRLTDLGVRLVDKDVVEAGNAFGMSPAQKLGKVELPLALPNIMAGLNQTIMMSLA 282

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG  +            ++  + +    + L+R
Sbjct: 283 MVVIASMV-------TAPGLGVLVLRGIRNLELGVGLMAGVCIVLLAVMLDR 327


>gi|328887062|emb|CCA60301.1| ABC transporter permease [Streptomyces venezuelae ATCC 10712]
          Length = 286

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 10/181 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V  ++A+++ +  G  +      +  + P  +++   PA    P+ +  +    
Sbjct: 63  SLRRIAVGFLLAAVLGVAAGTAVARSRWAADILGPLVEVVRPIPAIALVPVAILLLP--- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +      + +L +      A    ++E   +      R    ++LPG  P 
Sbjct: 120 -TNEQGIVFITCAAALFPVLVSTRHAVRALNPAWEEAVLTLGGGRARVLFSVVLPGALPG 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +      +P V +G+  +   
Sbjct: 179 IFGGLSVGIGVSWICVISAEMISGEY------GVGYRTWQDYTVVDYPGVFVGMATIGAL 232

Query: 566 V 566
            
Sbjct: 233 G 233



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 87/238 (36%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L    ++     ++   +   +   +  Q    +  R+    +++ +      T  A+SR
Sbjct: 30  LWLRFEQFPTVVEVASALADRVGTEAYWQDLGHSLRRIAVGFLLAAVLGVAAGTAVARSR 89

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +L P++++++ IP +  +   ++             E   +F    + ++ +  S 
Sbjct: 90  WAADILGPLVEVVRPIPAIALVPVAILLL--------PTNEQGIVFITCAAALFPVLVST 141

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +    EE   +      +  + + +P ++PG+   + + +   W  V+++EMI 
Sbjct: 142 RHAVRALNPAWEEAVLTLGGGRARVLFSVVLPGALPGIFGGLSVGIGVSWICVISAEMIS 201

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
                    G+G          D   +   M T+  + +L       L R +  W  +
Sbjct: 202 G------EYGVGYRTWQDYTVVDYPGVFVGMATIGALGWLTSTAVESLGRRVTAWLPR 253


>gi|291451756|ref|ZP_06591146.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces albus J1074]
 gi|291354705|gb|EFE81607.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces albus J1074]
          Length = 630

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 71/459 (15%), Positives = 141/459 (30%), Gaps = 48/459 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  S R+  +L P+LD MQ +P   +L   V+ F 
Sbjct: 119 TMQTLALMIVAVLASVILGALLGLAAGLSDRVFRLLRPVLDTMQVLPAFAYLLPVVLVFG 178

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L      + E   S   +  Q+ +   
Sbjct: 179 IGVP--------AAVLATVIYAAPPMARLTALGLRGADAGVMEAVTSLGTTARQRLFTAR 230

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 231 LPLARKELLLGVNQTIMLALSMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 283

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF-------------RK 291
            + ++ +  + D+         +   R+          S  +                R 
Sbjct: 284 GIPIVLLAVVLDR------TTAAAGRRIGAGEAASGPVSPAVGWAVAAVATLAVALGTRF 337

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTL-------GVIRFHFPENFLQLCSNQRVSYML 344
            + L +    ++    P++  V  +   L       G            +    R     
Sbjct: 338 ASALEWPATWTYGIAEPVNRAVDWMTDHLYSGVPLIGGTADWAGHFTTWVLDPVRDGLQW 397

Query: 345 DIFWFCVVCGVAIGIA---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             +W  ++   A+      W++            VL V      T+ +V+  + +  ++ 
Sbjct: 398 LPWWGLLLIVAALAWLIGTWRTALTATLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVLG 457

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
              GI         + ++P   +    P  V+   VV+              +  +    
Sbjct: 458 FATGIAAARSNRAEAALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVV 517

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    G         E A S   T  +  R + LP
Sbjct: 518 RI----TTQGLRGVDAGALESARSLGATSSQQIRQVQLP 552



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + +I   L  +  T        +    + V  +   +  T  ++L+A+ ++L+  F    
Sbjct: 403 LLLIVAALAWLIGTWRTALTATLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVLGFATGI 462

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA+S R    L P+LD+ Q++P   +L   V  F       V  A + A+ A+      
Sbjct: 463 AAARSNRAEAALRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI--- 519

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                  Q L  +     E +RS   +  Q+   + +P +   L+  +   +      V+
Sbjct: 520 -----TTQGLRGVDAGALESARSLGATSSQQIRQVQLPLARSSLLLAVNQGVVLVLAVVI 574

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              ++  G            +   + + DL   L A   ++ +  + D++
Sbjct: 575 IGGLVGGGALGYD-------VVFGLAQGDLAVGLVAGAAIVCLGLMLDRV 617


>gi|254461891|ref|ZP_05075307.1| glycine betaine/L-proline transport system permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678480|gb|EDZ42967.1| glycine betaine/L-proline transport system permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 517

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +V+  + ILL  +                + +      A  T   + +A  +S++     
Sbjct: 295 IVVASLIILLTWLTAGVRMAIYSGAFLAYMGLLGFWDKAMTTLALLGTAACLSIIIGIPL 354

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+  R    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 355 GMFAARRPRFYSFIQPIMDFMQTMPAFVFMIPVIAFFGTGKP--------AAVVTTMIFG 406

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 407 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAGINQTIMLSLAM 466

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 467 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 512



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS    +    ++    +    +   Y      Y  +L        T+  +     ++ I
Sbjct: 290 VSTPWIVVASLIILLTWLTAGVRMAIYSGAFLAYMGLLGFWDKAMTTLALLGTAACLSII 349

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+G++   RP   S IQP    +   PA VF    +  ++++       +   MIFG
Sbjct: 350 IGIPLGMFAARRPRFYSFIQPIMDFMQTMPAFVFM---IPVIAFFGTGKPAAVVTTMIFG 406

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++   + G    P   +E A SF    W     + LP   P    G       +  
Sbjct: 407 GT-PVVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAGINQTIMLSLA 465

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +V+ +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 466 MVVVASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 512


>gi|297155659|gb|ADI05371.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 269

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 102/276 (36%), Gaps = 22/276 (7%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLD 57
           L  ++P    RR  P         LV+ I   +              P  I       + 
Sbjct: 5   LEPVVPLSARRRTVPRWLRRTTGPLVLLIAWQVCSATGVLSPDTLASPGTIARTASDLIG 64

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +LP     +  R+L  ++I  +     A ++  SR    ++   + ++++IP +G + 
Sbjct: 65  DGTLPHAMLVSVQRVLVGLLIGAVAGVSLALVSGLSRLGEDLVDATVQMLRTIPWVGMIP 124

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++            E   I  I     +++  ++Y  +  +   L E   S  L  W
Sbjct: 125 LFIIWLGIG--------EAPKIALISLGVTFHLYLNVYAGIRGVDAQLIEAGTSLGLGRW 176

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               ++ +P ++PG +  +  S++  W  +V       G+T+    GIG  +  A +   
Sbjct: 177 GLIRHVVLPGALPGAMTGLRYSLATAWLALV------FGETINADDGIGFLLNRAREFFQ 230

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
              I+  ++    +  L D +   L R ++ W   F
Sbjct: 231 TDVIVVCLIVYAALGLLADFIVRTLERLLLQWRPSF 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 90/268 (33%), Gaps = 22/268 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV---L 377
            V+        +     +    ++ +  + V     +              T  D+    
Sbjct: 7   PVVPLSARRRTVPRWLRRTTGPLVLLIAWQVCSATGVLSPDTLASPGTIARTASDLIGDG 66

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +++ RV+V ++I ++  + + +  G        +    Q+L   P     PL 
Sbjct: 67  TLPHAMLVSVQRVLVGLLIGAVAGVSLALVSGLSRLGEDLVDATVQMLRTIPWVGMIPLF 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             L+  G  +++  NV AG         E  +S  +  W   R++
Sbjct: 127 IIWLGIGEA----PKIALISLGVTFHLYLNVYAGIRGVDAQLIEAGTSLGLGRWGLIRHV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  +TG   +   AW A +  E  +         G+G  +  + E      +V+
Sbjct: 183 VLPGALPGAMTGLRYSLATAWLALVFGETINADD------GIGFLLNRAREFFQTDVIVV 236

Query: 558 GVLIMCCFVLA-------LNRFL--WHP 576
            +++     L        L R L  W P
Sbjct: 237 CLIVYAALGLLADFIVRTLERLLLQWRP 264


>gi|104779506|ref|YP_606004.1| sulfonate ABC transporter permease SsuC [Pseudomonas entomophila
           L48]
 gi|95108493|emb|CAK13187.1| sulfonate ABC transporter, permease protein SsuC [Pseudomonas
           entomophila L48]
          Length = 265

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 80/245 (32%), Gaps = 17/245 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIW 381
                    +R++          V  +A+   W S   +                  +  
Sbjct: 2   SRATSTTWPKRLAPWALPVLLVAVWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R  +  +I   + + +G   G        +    Q++   P     PLV+   
Sbjct: 62  HLAISGWRAGLGFLIGGSLGLLLGFITGLSSWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG
Sbjct: 122 GI----DESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPG 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S        +G+G     + E      VVL +++
Sbjct: 178 ALPSILVGVRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVLAIVL 231

Query: 562 MCCFV 566
                
Sbjct: 232 YAVLG 236



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 102/272 (37%), Gaps = 22/272 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            +P      A  +++  +  L         +    P  +V      +    +  + + + 
Sbjct: 8   TWPKRLAPWALPVLLVAVWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISG 67

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R     +I      +   +   S     +L   + +++++P L  +   +++F      
Sbjct: 68  WRAGLGFLIGGSLGLLLGFITGLSSWGERLLDSSVQMIRNVPHLALIPLVILWFGID--- 124

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++
Sbjct: 125 -----ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGAL 179

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I          GIG     A +      ++ A++   
Sbjct: 180 PSILVGVRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVLAIVLYA 233

Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278
            +    D   + L R  + W   +++ +  G 
Sbjct: 234 VLGKCADLAARGLERVWLRWHPAYQVAKKEGA 265


>gi|330874193|gb|EGH08342.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 265

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          +  +++   W S   +       D    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAIWQLSVSAGWLSTRILPAPSAVIDAGVTLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + +  +         +    P  ++D     +    +  + + +  R      I   
Sbjct: 20  VLLLAIWQLSVSAGWLSTRILPAPSAVIDAGVTLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|225619265|ref|YP_002720491.1| taurine ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214084|gb|ACN82818.1| taurine ABC transporter, permease protein [Brachyspira
           hyodysenteriae WA1]
          Length = 256

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 101/251 (40%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L+  +++  + G      P D++      +    L  +   +  R+LS   ++ +
Sbjct: 18  IIIALLIWQLVSSSVAGAV-IASPADVLKSFVREISNGKLLNHIGISLFRVLSGFGLAFV 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +   A L    + + +++ P++  +++IP L ++   VV             E A I  
Sbjct: 77  VSIPIAFLMGWYQPVQLLIEPVIQFVRNIPALAYIPLVVVAQGVG--------ESAKITV 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF S    M  ++YQ +  + + L + +R         F  + +P S+P ++  M + + 
Sbjct: 129 IFISTFLVMIVTVYQGVREVDQTLIKAARVLGAKDKDIFLKVVIPASVPYILVGMRLGLG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
                ++A+E+           G+G  I  A     +  ++  ++ +     + +    L
Sbjct: 189 ASLTTLIAAEL------TGSSSGLGQMIQEASLYFRMDIVMLGIILIGITGLILNFIVSL 242

Query: 259 LFRPMIVWSNK 269
           +   + +W  K
Sbjct: 243 IENKLTIWQEK 253



 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 78/231 (33%), Gaps = 10/231 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             P    +         +  + W  V   VA  +       + +         ++    I
Sbjct: 3   SKPMGKKKYIFTAASIIIALLIWQLVSSSVAGAVIASPADVLKSFVREISNGKLLNHIGI 62

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FRV+    +A ++ IP+   +G+   +   I+P  Q +   PA  + PLVV       
Sbjct: 63  SLFRVLSGFGLAFVVSIPIAFLMGWYQPVQLLIEPVIQFVRNIPALAYIPLVVVAQGVG- 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++   T   ++  V  G         + A          +  +++P   PY
Sbjct: 122 ---ESAKITVIFISTFLVMIVTVYQGVREVDQTLIKAARVLGAKDKDIFLKVVIPASVPY 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            + G     G +    I +E+         ++GLG  I E++       V+
Sbjct: 179 ILVGMRLGLGASLTTLIAAEL------TGSSSGLGQMIQEASLYFRMDIVM 223


>gi|126461621|ref|YP_001042735.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126103285|gb|ABN75963.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 284

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N+ D    +LVI I+  L   +Q       +V      +          ++   ++ A V
Sbjct: 53  NVLDAAPPLLVIAILAALAWFLQRNWRVTALVVAGFAFILNQGYWDETMQSLTLIVLACV 112

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +         AA   RL   + P+LD+MQ++P   +L   +V+F     G V G    
Sbjct: 113 TCMAIGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGL---GMVPGLIAT 169

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +            +  + + P  L+E + +F  +  Q+ W + +P++ P ++  + 
Sbjct: 170 VIFVLPAP-----IRLTHLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLN 224

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + ++          G+G  +  A+   +      +   ++ V  + D+
Sbjct: 225 QTIMLSLSMVVIAALVGAN-------GLGVPVVRALNTVNTALGFESGFIIVVVAIVLDR 277

Query: 258 LL 259
           +L
Sbjct: 278 ML 279



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 82/234 (35%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  + WF         +      +I+N   + + +        ++  +V+  +    
Sbjct: 64  IAILAALAWFLQRNWRVTALVVAGFAFILNQGYWDETMQ-------SLTLIVLACVTCMA 116

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 117 IGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLIATVIFVLPA 176

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P   KE A++F  T  +    + LP  FP  +TG       + +
Sbjct: 177 ---PIRL-THLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +    +         I+    + L+R L
Sbjct: 233 MVVIAALVG-------ANGLGVPVVRALNTVNTALGFESGFIIVVVAIVLDRML 279


>gi|257057391|ref|YP_003135223.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256587263|gb|ACU98396.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 273

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V      ++ R+     IA++I + +G  +G        I P    + A P     P+ +
Sbjct: 65  VFDDVLPSLGRIFGSWAIATVIGVALGTALGRSQTALDYIGPLLSFMRAVPPPALVPVFM 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     N    + ++FG  W I+ N I G  +     +E A SF      W   ++
Sbjct: 125 VLFGI----DNTMKVVTIVFGVIWPIILNTIDGVRSVGPLQQETARSFRTPRHYWITMVV 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G   +   A    +++E+         T G+G  +  + +   F  +   
Sbjct: 181 LPAAMPKIFAGLRLSLSLALILMVIAEMVG------TTNGIGFQLISAQQSFEFATMWTW 234

Query: 559 VLIMCCFVLALNRFL 573
           ++++      LN  L
Sbjct: 235 IVLLGVLGYGLNTLL 249



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 17/206 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+  +  I+ +      T   +S+     + P+L  M+++P    +   +V F  
Sbjct: 70  LPSLGRIFGSWAIATVIGVALGTALGRSQTALDYIGPLLSFMRAVPPPALVPVFMVLFGI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K        +  I    +W +  +    + ++    +E +RSFR         + +
Sbjct: 130 DNTMK--------VVTIVFGVIWPIILNTIDGVRSVGPLQQETARSFRTPRHYWITMVVL 181

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +S+S     +V +EM+   +      GIG  +  A +  +   +   +
Sbjct: 182 PAAMPKIFAGLRLSLSLALILMVIAEMVGTTN------GIGFQLISAQQSFEFATMWTWI 235

Query: 246 LTMLGVIFLYDQLLF---RPMIVWSN 268
           + +  + +  + LL    R ++VW  
Sbjct: 236 VLLGVLGYGLNTLLLALERRVLVWQP 261


>gi|163853131|ref|YP_001641174.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163664736|gb|ABY32103.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 353

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y 
Sbjct: 161 SIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD 220

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      R  R +I+P + P 
Sbjct: 221 G----PKIAIIVIGTFFQQVLVIANTTRRVDPLLIEAALTMGSRNLRLIRRVIVPAVLPQ 276

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   +L++   
Sbjct: 277 IYRDQRILLGWAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLV 330

Query: 566 VLALNR---FLWHPLYLYGT 582
            +A +     L   L+ Y  
Sbjct: 331 GIATDIALALLGRRLFPYAR 350



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +   P   D   LP     +   +     +S L       L      +  +  P+++ ++
Sbjct: 142 LTAPPPQRDTIWLPASLWHSIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFVR 201

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            +P   F    V         K        I  I     +     +  +   +   L E 
Sbjct: 202 YLPAPAFGALMVAILGIYDGPK--------IAIIVIGTFFQQVLVIANTTRRVDPLLIEA 253

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + +      +    + VP  +P +  +  + +   W +++ +E+I          GI  +
Sbjct: 254 ALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLGWAWTYLIVAELIGTSS------GITFF 307

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           I    + Q    +  A+L +  V    D    LL R +  ++
Sbjct: 308 ITQQARYQHFDNVYAAILVIGLVGIATDIALALLGRRLFPYA 349


>gi|114705138|ref|ZP_01438046.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Fulvimarina pelagi HTCC2506]
 gi|114539923|gb|EAU43043.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Fulvimarina pelagi HTCC2506]
          Length = 280

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  V + G+++  L    + T+   +  +  I        +  + +   +LSA ++ +  
Sbjct: 54  LIIVALFGLLSFWLQRSWKLTLFVVLGFLFIIN---QGYWEEMTESLTLVLSACIVCMAI 110

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA   ++   L P+LD+MQ++P   +L   +V+F     G V G     IF +
Sbjct: 111 GVPIGIAAAHRPKVYAFLQPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLLATVIFVL 167

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                       Y  + + P+ L E + +F  +G QK W + +P+++P ++  +  ++  
Sbjct: 168 PAP-----IRLTYLGVSSTPKSLLEAADAFGATGSQKLWKVELPYALPQIMAGLNQTIML 222

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               VV + ++          G+G  +  A+ + +      +   ++ V  + D++L
Sbjct: 223 SLSMVVIAALV-------GADGLGVPVVRALNQVNTALGFESGFIIVVVAIILDRVL 272



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L I     +    +  +W+   ++V  F +            ++  V+   I+   
Sbjct: 50  TPNPLIIVALFGLLSFWLQRSWKLTLFVVLGFLFIINQGYWEEMTESLTLVLSACIVCMA 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + +QP   L+   P  V+    +       +   L   + ++  
Sbjct: 110 IGVPIGIAAAHRPKVYAFLQPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E A +F  TG +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TYLGVSSTPKSLLEAADAFGATGSQKLWKVELPYALPQIMAGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +         I+    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTALGFESGFIIVVVAIILDRVL 272


>gi|229151130|ref|ZP_04279337.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus m1550]
 gi|228632344|gb|EEK88966.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus m1550]
          Length = 282

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 18/256 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +     +     P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIILMIWQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAATGFFIGGG 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLER 274
           L    + W + F+ E 
Sbjct: 265 LEVKFLRWRDNFKGET 280



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHLSISVFRAATGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V    +   +      LL+  G  + +  N   G     +   +VA     +  +    
Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V 
Sbjct: 192 LILPSALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245

Query: 557 LGVLIMCCFVLALNRFL 573
           +G++I        +  +
Sbjct: 246 VGIIIFAFVGKFSDSLV 262


>gi|307317458|ref|ZP_07596898.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306897047|gb|EFN27793.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 287

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 29/270 (10%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--------- 373
                     +  +  +    L   +  +  G+   IA+  +  I     +         
Sbjct: 9   PPLRSSLVLRRKHALPKTPTALGRTFTTITLGLPAVIAFALLWEIAPRAGWINALFFPPL 68

Query: 374 QDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             VL V+W             I++ R  +  ++A +  +P+G  +G             Q
Sbjct: 69  SQVLAVLWEMIVSGQLADHIGISLERAAIGFLLACVTAVPLGFLMGRYSLFEKASDFLVQ 128

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L         P+ +  +     +       +  +   +++L N I G  +      + A
Sbjct: 129 TLRNTSQFALLPVFIIVLGIGEASK----IAITFYAAVFFLLINTIVGVKSVDPLLVKAA 184

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   + W  ++ +I P   P  V GA      +  + I +E+ +        +G+G  I
Sbjct: 185 RSMGTSDWDLFKKVIFPSAIPSIVAGARLGVKTSLFSVIAAEMLA------AQSGIGYLI 238

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             S+       +  G+L +    L LN  L
Sbjct: 239 QHSSLMLETDRMYAGILTLTIIGLLLNYLL 268



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           ++AF L+  I             P   V  V   + V   L  +   +  R     +++ 
Sbjct: 44  VIAFALLWEIAPRAGWINALFFPPLSQVLAVLWEMIVSGQLADHIGISLERAAIGFLLAC 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L  +          ++  +++      L   ++             E + I 
Sbjct: 104 VTAVPLGFLMGRYSLFEKASDFLVQTLRNTSQFALLPVFIIVLGIG--------EASKIA 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F + V+ +  +    + ++   L + +RS   S W  F  +  P ++P +V    + +
Sbjct: 156 ITFYAAVFFLLINTIVGVKSVDPLLVKAARSMGTSDWDLFKKVIFPSAIPSIVAGARLGV 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL- 259
               F V+A+EM+          GIG  I  +    +   +   +LT+  +  L + LL 
Sbjct: 216 KTSLFSVIAAEMLA------AQSGIGYLIQHSSLMLETDRMYAGILTLTIIGLLLNYLLV 269

Query: 260 --FRPMIVW 266
              R    W
Sbjct: 270 AGERRATRW 278


>gi|262043921|ref|ZP_06017009.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259038775|gb|EEW39958.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 230

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 34  FCMVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 90

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA+       +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 91  IIFALP-----PIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVN 145

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + MI VG       G+G  +   I   D+       + ++ +  + D+
Sbjct: 146 QTLMLALSMVVIASMIAVG-------GLGQIVLRGIGRLDMGLATVGGVGIVILAIILDR 198

Query: 258 L 258
           L
Sbjct: 199 L 199



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 11/177 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              +I +P+GIW+   P  +  I+P    +   PA V+   +V          N+   ++
Sbjct: 34  FCMVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVV 89

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I      I+   I G +  P D  E + SF  +  +    + LP   P  + G      
Sbjct: 90  TIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLM 149

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ + + G       GLG  +     +       +G + +    + L+R 
Sbjct: 150 LALSMVVIASMIAVG-------GLGQIVLRGIGRLDMGLATVGGVGIVILAIILDRL 199


>gi|239813121|ref|YP_002942031.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799698|gb|ACS16765.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 263

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 15/238 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   V        + S+   +N         ++     T+ R++   ++AS+  + +G  
Sbjct: 35  WVSRVFLPTPQATFASLLEGLNLRGPNSNGELLAFTQATVGRMLQGWLLASLFGVLLGAA 94

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P + + +QP  + +   PA+   PL +S            +  ++ FG  W +L  
Sbjct: 95  IGVSPAVRAWVQPTLEFIRPLPASALLPLAISIFGLNPG----MVLFVVAFGAMWPVLLA 150

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G +A      EVA    ++   +   + LP   P  + G   A   A   ++V E+ 
Sbjct: 151 TVHGFAAVEPRLAEVARCLQMSRAAFVWKMGLPNAMPDILAGMRLALTIALIVAVVGEMI 210

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +        +GLG  I  +       ++  G++++     A N  L      +  + L
Sbjct: 211 A------SQSGLGQAILLAARAFRASDLFAGIVLLGLIGFASNALL-----AFAEKRL 257



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 84/215 (39%), Gaps = 17/215 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L  +   T  RML   +++ LF  +       S  +   + P L+ ++ +P    L
Sbjct: 62  SNGELLAFTQATVGRMLQGWLLASLFGVLLGAAIGVSPAVRAWVQPTLEFIRPLPASALL 121

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  L PG V+       F +    +W +  +       +   L EV+R  ++S 
Sbjct: 122 PLAISIFG-LNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSR 173

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               W +G+P +MP ++  M ++++      V  EMI          G+G  I LA +  
Sbjct: 174 AAFVWKMGLPNAMPDILAGMRLALTIALIVAVVGEMIA------SQSGLGQAILLAARAF 227

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
               +   ++ +  + F  + LL    + ++ W  
Sbjct: 228 RASDLFAGIVLLGLIGFASNALLAFAEKRLLRWQQ 262


>gi|91783327|ref|YP_558533.1| ABC aliphatic sulfonates transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
 gi|91687281|gb|ABE30481.1| ABC aliphatic sulfonates transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 280

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +   +   I +   + DV        ++ +R V    I   I + +G+  G       
Sbjct: 61  LAVVKAAWSLIQSGEMWADVK-------VSTWRAVSGFAIGGGIGLVLGLATGLFKPAEI 113

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +    Q++   PA    PLV+                L+  G  + I  N   G  +  
Sbjct: 114 VLDSTVQMVRNIPALAMIPLVILWFGIE----EEAKVFLVALGVFFPIYVNTFHGIRSVD 169

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S        
Sbjct: 170 ANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------AQ 223

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +G+G     + E      VV+G+L+        +  
Sbjct: 224 SGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVL 259



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 96/260 (36%), Gaps = 18/260 (6%)

Query: 16  FPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
                  LA +LV        +   +    P  +V      +    +      +T R +S
Sbjct: 30  LAPWLAPLAILLVWEFAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADVKVSTWRAVS 89

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I      V        +   +VL   + ++++IP L  +   +++F           
Sbjct: 90  GFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMVRNIPALAMIPLVILWFGIE-------- 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  + +  + ++  +L E++RS+ + G+  + ++ +P ++P ++ 
Sbjct: 142 EEAKVFLVALGVFFPIYVNTFHGIRSVDANLIEMARSYGVRGFALYRHVILPGALPSILV 201

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +    W  ++ +E I          GIG     A +      ++  +L    +  L
Sbjct: 202 GVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKL 255

Query: 255 YDQL---LFRPMIVWSNKFR 271
            D L   L R  + W   ++
Sbjct: 256 ADVLAKSLERVSLRWHPAYQ 275


>gi|254252483|ref|ZP_04945801.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124895092|gb|EAY68972.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 270

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 87/254 (34%), Gaps = 12/254 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                       +  +   V   L I W     V  ++  +  + +  +   ++      
Sbjct: 6   SATGVAVAGRAWRGIAPWAVPLALLIAWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGE 65

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+
Sbjct: 66  MWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           L+  G  + +  N   G  +   +  E+A S+ + G+  +R +I
Sbjct: 126 LWFGI----DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVI 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  + G   A G  W   IV+E  S        +G+G     + E      VV+G
Sbjct: 182 LPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVG 235

Query: 559 VLIMCCFVLALNRF 572
           +L+        +  
Sbjct: 236 ILLYAVLGKLADVL 249



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++   +   +     +    P  +V      +    +      +T R 
Sbjct: 18  RGIAPWAVPLALLIAWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 78  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 132 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 190 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   L R  + W   ++
Sbjct: 244 KLADVLAKWLERVTLRWHPAYQ 265


>gi|108805376|ref|YP_645313.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108766619|gb|ABG05501.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 293

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   +++A  ++L+       +AAKSR +  VL P+LD MQ++P   +L   +V
Sbjct: 93  WEDAMLTLALVIAATAVALVVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYLVPAIV 152

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                           A+ A+    +          L  + ++  E + +F  +GWQ   
Sbjct: 153 LLGLG--------AAPALVAVVIFAMPPAVRLTMLGLQQVSKETVEAASAFGATGWQTLR 204

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + +I  G       G+G  +   + + D+   
Sbjct: 205 KVELPLAMPTIMAGVNQVIMLSLSMVVIAALIGAG-------GLGEEVYQGLSQLDVGKS 257

Query: 242 LYAMLTMLGVIFLYDQL 258
               L ++ +  L D++
Sbjct: 258 FKGGLGIVIIAILLDRI 274



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 85/234 (36%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIAS 398
           ++++  +    V  G+A  ++   I  +            +W    +T+  V+    +A 
Sbjct: 52  LTFLPPLVMVAVFAGLAWLVSSWRIALLTAAGLLLLQGLRLWEDAMLTLALVIAATAVAL 111

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++ IP+GI       + + ++P    +   PA V+    +  +        + + +  + 
Sbjct: 112 VVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYLVPAIVLLGLGAAPALVAVVIFAMP 171

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                     + G      +  E AS+F  TGW+  R + LP   P  + G       + 
Sbjct: 172 PAVRL----TMLGLQQVSKETVEAASAFGATGWQTLRKVELPLAMPTIMAGVNQVIMLSL 227

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G       GLG  + +   +    +   G L +    + L+R 
Sbjct: 228 SMVVIAALIGAG-------GLGEEVYQGLSQLDVGKSFKGGLGIVIIAILLDRI 274


>gi|116332927|ref|YP_794454.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus brevis ATCC
           367]
 gi|116098274|gb|ABJ63423.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus brevis ATCC
           367]
          Length = 506

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 20/217 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + Q   +     L +++I+ +     A +    +RL  V++ I  I+Q+IP L  L  
Sbjct: 13  GEIVQSIGQHIGLSLISLLIAAVIAIPLAIILMNHQRLAKVMLQITSILQTIPSLALLGI 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               + +I A+    V  +  + Y  L  I   LEE + +F LS   
Sbjct: 73  LIPLVGIG--------TVPSIIALVIYAVMPIFQNTYSGLTTIDPSLEEAATAFGLSRRM 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K   + +P +MP ++  + ++M      ++ +  +     +I   G+G+YI L I+  + 
Sbjct: 125 KLLRIELPLAMPMIISGIRIAM----VMIIGTATLAA---LIGAGGLGTYILLGIETNNN 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
                A+L +  V+     L+F   I W  +   ++ 
Sbjct: 178 -----ALLIIGAVLSAILALVFGAGIDWLGRLTFKKA 209



 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 11/179 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA++I IP+ I +     ++  +     +L   P+     +++  V    +   +
Sbjct: 27  LISLLIAAVIAIPLAIILMNHQRLAKVMLQITSILQTIPSLALLGILIPLVGIGTVPSII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N  +G +      +E A++F ++       I LP   P  ++G 
Sbjct: 87  ALVIYAVM----PIFQNTYSGLTTIDPSLEEAATAFGLSRRMKLLRIELPLAMPMIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A       + ++ +   G       GLG YI    E  +   +++G ++     L  
Sbjct: 143 RIAMVMIIGTATLAALIGAG-------GLGTYILLGIETNNNALLIIGAVLSAILALVF 194


>gi|21223208|ref|NP_628987.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces coelicolor A3(2)]
 gi|9367461|emb|CAB97434.1| putative glycine betaine ABC transport system integral membrane
           protein [Streptomyces coelicolor A3(2)]
          Length = 648

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 140/452 (30%), Gaps = 46/452 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S+    +    A  S R+  VL P+LD MQ +P   +L   V+ F 
Sbjct: 143 TMQTLALMVVAVLASVAVGALLGLAAGLSDRMDRVLRPVLDTMQVLPAFAYLLPVVLVFG 202

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L    R++ E   S   +  Q+     
Sbjct: 203 IGVP--------AAVLATVVYAAPPMARLTSLGLRGADREVLEAVESLGTTARQRLLTAR 254

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 255 IPLARKELLLGVNQTIMMALSMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 307

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL---------YLFRKTNFL 295
            + ++ +  + D    R       +             +W+             R   FL
Sbjct: 308 GIPIVLLAVVLD----RVTGAAGERL----GESGKSPVTWLYALVVAAAVALAGRLAGFL 359

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGV------IRFHFPENFLQLCSNQRVSYMLDIFWF 349
            +      N   P++  V  +   L            +  +F     N     +  + W+
Sbjct: 360 DWPDGWDLNIAEPVNRAVDWMTAHLYSGVPVVGGTADWAAHFTSWVLNPLREGLQWLPWW 419

Query: 350 CVVCGVAIGI----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            V+  VA        W++    V       VL V      T+ +V+  + +  ++    G
Sbjct: 420 SVLLIVAALAWLIGTWRTALTAVLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVVGFATG 479

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I           ++P   +    P  V+   VV+              +  +        
Sbjct: 480 IAAARSDRFERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI-- 537

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                G         E A S   T  +  R +
Sbjct: 538 --TAQGLRQVDPAAMESARSLGATSGQQLRQV 567



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             + +L++  +  L+   +          +    + V  +   +  T  ++L+A+ ++L+
Sbjct: 418 WWSVLLIVAALAWLIGTWRTALTAV----LAMAAIGVLGVWNPSLDTLSQVLAAVAVTLV 473

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F     AA+S R   +L P+LD+ Q++P   +L   V  F       V  A + A+ A
Sbjct: 474 VGFATGIAAARSDRFERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPA 533

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +             Q L  +     E +RS   +  Q+   + 
Sbjct: 534 VVRI--------TAQGLRQVDPAAMESARSLGATSGQQLRQVQ 568


>gi|90577630|ref|ZP_01233441.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio angustum S14]
 gi|90440716|gb|EAS65896.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio angustum S14]
          Length = 280

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 95/244 (38%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              ++F  +   L I I   L   +         V    + +      Q    T + + +
Sbjct: 43  FLVDVFKWMPPALPILITAALAWYLHRKISLVVFVVAALLVILNLGYWQEMLETFVLVFA 102

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A  IS+L       ++A    L  ++ PILD+MQ++P   +L  T+V F     G V G 
Sbjct: 103 ATTISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGL 159

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFAI            Y  +  +P DL E  ++F  S  +    + +P +MP ++ 
Sbjct: 160 ISTIIFAIAAP-----IRLTYLGITKVPEDLIEAGKAFGASRMKLLLKVELPAAMPSIMA 214

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   +      VV + ++          G+G  +  A+   ++     A L ++ V  +
Sbjct: 215 GITQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGLAIVLVAII 267

Query: 255 YDQL 258
            D+L
Sbjct: 268 LDRL 271



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  +     + F  +     +     + W+   
Sbjct: 10  PLGQWMEAGVDWLTINAAGLFDAISFFLETVILFLVDVFKWMPPALPILITAALAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  KISLVVFVVAALLVILNLGYWQEMLETFVL-------VFAATTISVLIGVPIGIMSAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLMRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P D  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEDLIEAGKAFGASRMKLLLKVELPAAMPSIMAGITQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|323141264|ref|ZP_08076160.1| ABC transporter, substrate-binding protein, QAT family
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414221|gb|EFY05044.1| ABC transporter, substrate-binding protein, QAT family
           [Phascolarctobacterium sp. YIT 12067]
          Length = 625

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 18/241 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N       ++ I  +  +L G     +   I  I    +         + T   ++S+++
Sbjct: 391 NFIPWWLTIIAIAALGKVLTGKLSRGI---IYGIGLFAIGAFGYWSMMNETLAVVISSVI 447

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ISLL       L + SR    +L P+LD MQ++P   ++   V+      PGKV      
Sbjct: 448 ISLLLGLPIGILVSTSRLANSLLRPLLDAMQTMPTFVYMIPAVMLLG---PGKVPAVLAT 504

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            ++AI       +       +  +  ++ E S +F  S WQ  + + +P +MP ++  + 
Sbjct: 505 VVYAIV-----PVIRLTSHGIQQVDPNVVEASAAFGASRWQTLFKVQIPQAMPTIMTGIN 559

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +M      VV   MI          G+G  + +AI   +    L A ++++ +  + D+
Sbjct: 560 QTMMMAVAMVVTCAMIGAN-------GLGMEVLIAINRTESGRGLIAGISIVIIAIIIDR 612

Query: 258 L 258
           L
Sbjct: 613 L 613



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 12/201 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + + L I     +  V  G   + I Y +  F      Y   +   T+  V+  +II+ +
Sbjct: 393 IPWWLTIIAIAALGKVLTGKLSRGIIYGIGLFAIGAFGY-WSMMNETLAVVISSVIISLL 451

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +      +S ++P    +   P  V+    V  +    +   L   +  I  
Sbjct: 452 LGLPIGILVSTSRLANSLLRPLLDAMQTMPTFVYMIPAVMLLGPGKVPAVLATVVYAIV- 510

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E +++F  + W+    + +P   P  +TG       A  
Sbjct: 511 ---PVIRLTSHGIQQVDPNVVEASAAFGASRWQTLFKVQIPQAMPTIMTGINQTMMMAVA 567

Query: 520 ASIVSEVASWGHIHLRTTGLG 540
             +   +           GLG
Sbjct: 568 MVVTCAMIG-------ANGLG 581


>gi|257483758|ref|ZP_05637799.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289626097|ref|ZP_06459051.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289651125|ref|ZP_06482468.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|320326458|gb|EFW82510.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331751|gb|EFW87689.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330868944|gb|EGH03653.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
 gi|330872577|gb|EGH06726.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330987201|gb|EGH85304.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331012090|gb|EGH92146.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 265

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|119964134|ref|YP_947214.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter aurescens TC1]
 gi|119950993|gb|ABM09904.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Arthrobacter aurescens TC1]
          Length = 310

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 19/256 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R        +L   +R  +   +    ++    +  A   +   +    +  V     L 
Sbjct: 46  RPDVRPASRRLGPGKRRRFAGLVGPAALILLWVVASATGLLDPRILSEPWTVVSTAGELI 105

Query: 384 C---------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                     I+  R  + +    ++   + +  G      S I    Q+  A P     
Sbjct: 106 ADGRLQENLAISAQRAGLGLFFGIVVGAVLAVLSGLSRVGESLIDGPVQIKRAIPGLALI 165

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++               L +  G    I     AG       + E+A +  ++   + 
Sbjct: 166 PLLILWFGI----DETMKVLTITLGVFVPIYLQTHAGLRGIDLRYVELAQTVGLSRAGFI 221

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LPG  P +  G   A  GAW + +V E  +       T+G+G  +  +   G    
Sbjct: 222 RRVVLPGALPGFFLGLRFAVTGAWVSLVVVEQIN------STSGIGYMMELARTYGQTNI 275

Query: 555 VVLGVLIMCCFVLALN 570
           +VLG+ +     L  +
Sbjct: 276 IVLGLAVYGVLGLVSD 291



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 18/267 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           +       RR F  +    A +L+  + +   L   +  + P  +V      +    L +
Sbjct: 53  SRRLGPGKRRRFAGLVGPAALILLWVVASATGLLDPRILSEPWTVVSTAGELIADGRLQE 112

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + +  R    +   ++   V A L+  SR    ++   + I ++IP L  +   +++F
Sbjct: 113 NLAISAQRAGLGLFFGIVVGAVLAVLSGLSRVGESLIDGPVQIKRAIPGLALIPLLILWF 172

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV+   L     I+           +  L  I     E++++  LS       +
Sbjct: 173 GIDETMKVLTITLGVFVPIY--------LQTHAGLRGIDLRYVELAQTVGLSRAGFIRRV 224

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++PG    +  +++G W  +V  E I          GIG  + LA        I+ 
Sbjct: 225 VLPGALPGFFLGLRFAVTGAWVSLVVVEQI------NSTSGIGYMMELARTYGQTNIIVL 278

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWS 267
            +     +  + D   +LL R  + W 
Sbjct: 279 GLAVYGVLGLVSDAAVRLLERKALSWQ 305


>gi|212695519|ref|ZP_03303647.1| hypothetical protein ANHYDRO_00036 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677519|gb|EEB37126.1| hypothetical protein ANHYDRO_00036 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 321

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I+    +    + + + +   ++ +    D  +++     ++  +     I +I+ I
Sbjct: 87  ILIIYDLLTLKFAVLPLPYFAWLDMIMNSMIADKGFLLESTLASLKLLFTGYFIGAILGI 146

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GI  G+   +   + PF +LL   P   + P+V+   +            ++  G  +
Sbjct: 147 ITGILAGYSKKVDYWVDPFLKLLGPIPTTTWIPVVMVLATSLFGG----AVFIIGLGVWF 202

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                 + G       + E A +         R I LP   P    G I+    A  + I
Sbjct: 203 QTTLATMTGIKNVDKSYYEAAKTLGANENELVRKIALPSASPNIFQGLISGMSSACTSLI 262

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI   +    +  +   ++I+    + +N  L
Sbjct: 263 VAEMLG------VESGLGWYITWKSSWADYSSMYGAIIILALTFIIVNMIL 307



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 92/239 (38%), Gaps = 16/239 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAMVISL 80
             F ++I    + L            +D++  ++  D   L +    +   + +   I  
Sbjct: 83  FVFAILIIYDLLTLKFAVLPLPYFAWLDMIMNSMIADKGFLLESTLASLKLLFTGYFIGA 142

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   +   LA  S+++   + P L ++  IP   ++   +V   +L+ G        A+F
Sbjct: 143 ILGIITGILAGYSKKVDYWVDPFLKLLGPIPTTTWIPVVMVLATSLFGG--------AVF 194

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I     +  T +    + N+ +   E +++   +  +    + +P + P +   ++  M
Sbjct: 195 IIGLGVWFQTTLATMTGIKNVDKSYYEAAKTLGANENELVRKIALPSASPNIFQGLISGM 254

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           S     ++ +EM+ V        G+G YI       D  ++  A++ +     + + +L
Sbjct: 255 SSACTSLIVAEMLGVES------GLGWYITWKSSWADYSSMYGAIIILALTFIIVNMIL 307


>gi|291537099|emb|CBL10211.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis M50/1]
          Length = 263

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 10/181 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+++R+ +  + A ++ +P+GI +G      + I+P  + +   P   F PL
Sbjct: 61  GSLLQNTGISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPL 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V             ++  GT + ++  V   A A P+D      +      +    
Sbjct: 121 IMVWVGIE----ESAKITVIFIGTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFK 176

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P + P  +       G AW   + +E+ +        TGLG  I +S        + 
Sbjct: 177 ILIPAMMPRLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQRFLKTDAIF 230

Query: 557 L 557
            
Sbjct: 231 A 231



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 89/229 (38%), Gaps = 18/229 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +F +L+FV+V+    I              P+++V+    ++   SL Q    +  R+  
Sbjct: 17  LFAILSFVIVLAAWLIASESGAIKEIFLPKPQNVVNYYIESIKDGSLLQNTGISIYRITL 76

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V ++L       L    ++    + P+ + ++ +P+  F+   +V+            
Sbjct: 77  GFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVGIE-------- 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A I  IF    + +   +      +P DL     +   +  +  + + +P  MP L+ 
Sbjct: 129 ESAKITVIFIGTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMPRLME 188

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            + M +   W ++V++E++          G+G  I  + +     AI  
Sbjct: 189 TLRMMIGWAWTYLVSAELVAANT------GLGYTILKSQRFLKTDAIFA 231


>gi|15966153|ref|NP_386506.1| putative glycine betaine transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|19880074|gb|AAM00245.1|AF360731_2 ProW [Sinorhizobium meliloti]
 gi|15075423|emb|CAC46979.1| Putative choline ABC transporter, permease component [Sinorhizobium
           meliloti 1021]
          Length = 281

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I ++  L    + +        +  + +      Q  + T   +L+A  +S+     
Sbjct: 54  LIIIAVVTALAWWFRRSLGIAAFTCLGLLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   AA+   +  ++ PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 FGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALILFGL---GVVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + SF  + WQ    + +PF+MP ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     + L ++ +  + D+L 
Sbjct: 226 MVVIAALV-------GADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             ++  V     W      +  FT   +L ++  G       T+  V+    ++  + +P
Sbjct: 54  LIIIAVVTALAWWFRRSLGIAAFTCLGLLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI    R  I S ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 FGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALILFGLGVVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A SF  T W+  R + LP   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +        L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272


>gi|29829974|ref|NP_824608.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces avermitilis MA-4680]
 gi|29607084|dbj|BAC71143.1| putative glycine betaine ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 647

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 74/444 (16%), Positives = 143/444 (32%), Gaps = 30/444 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  S R    L PILD MQ +P   +L   V+ F 
Sbjct: 143 TMQTLALMVVAVLASVVLGALLGLAAGLSDRTHRALRPILDTMQVLPAFAYLLPVVLVFG 202

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L +    + E   S   +  Q+     
Sbjct: 203 IGVP--------AAVLATVVYAAPPMARLTALGLRDADGGVLEAVESLGATARQRLLTAR 254

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 255 LPLARKELLLGLNQTIMMALSMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 307

Query: 245 MLTMLGVIFLYDQLLFRP-MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
            + ++ +  + D++         ++  R         A   V    R T+ L +    + 
Sbjct: 308 GIPIVLLAVVLDRVTGAAGEGPGADGSRRAGWAYAAAAAVAVALAGRFTHRLDWPDAWTV 367

Query: 304 NFFSPLSNNVKKLC-------RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
           +  +P++  V  +          LG            +    R       +W  ++   A
Sbjct: 368 HIAAPVNRVVDWMTDHLYSGVPYLGGTADWAGHFTTWVLDPLRDGLQWLPWWSVLLIVAA 427

Query: 357 IGIA---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +      W++    V       VL V      T+ +V+  + +  ++    G+       
Sbjct: 428 LAWLIGTWRTALTAVLAMAAIGVLGVWKPSLDTLAQVLAAVAVTLVLGFATGVAAARSDR 487

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   ++P   +    P  V+   VV+              +  +             G  
Sbjct: 488 VERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI----TTQGLR 543

Query: 474 AFPNDFKEVASSFHITGWRWWRYI 497
           A      E A S   TG +  R +
Sbjct: 544 AVDPAALESARSLGATGGQQLRQV 567



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             + +L++  +  L+   +          +    + V  + + +  T  ++L+A+ ++L+
Sbjct: 418 WWSVLLIVAALAWLIGTWRTALTAV----LAMAAIGVLGVWKPSLDTLAQVLAAVAVTLV 473

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F     AA+S R+  +L P+LD+ Q++P   +L   V  F       V  A + A+ A
Sbjct: 474 LGFATGVAAARSDRVERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPA 533

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +             Q L  +     E +RS   +G Q+   + 
Sbjct: 534 VVRI--------TTQGLRAVDPAALESARSLGATGGQQLRQVQ 568


>gi|325000348|ref|ZP_08121460.1| binding-protein-dependent transport systems inner membrane
           component [Pseudonocardia sp. P1]
          Length = 281

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 85/267 (31%), Gaps = 15/267 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--VCGVAIGIAWQSIGYIVNHFTYQDV 376
           TL   +   P    +         +L   W  +     +   +    +  +         
Sbjct: 18  TLRTRQTRGPARVPRWVVKTASPVLLVALWQVLSSTGLLPRDVLASPVTVVETAAGMWAD 77

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V     ++  RVV  I I  +  + +    G        I    Q+L   P     PL
Sbjct: 78  GAVQSAVVVSGARVVAGIAIGVVTAVVLATLSGLFRRGEDVIDAPVQMLRTVPVIGLIPL 137

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++               +L+     + +  N+  G         E A +  +  +   R+
Sbjct: 138 LIIWFGIG----EEPKIVLIGLAVTFPLYMNLFGGIRNVDATLVEAARTLGLGWFGQVRH 193

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P ++ G   + G AW A +  E  +       T+G+G  +  + E      +V
Sbjct: 194 VILPSAMPQFLVGLRYSLGTAWLALVFGETIN------ATSGIGYEMNRAREFFETDVIV 247

Query: 557 LGVL---IMCCFVLALNRFLWHPLYLY 580
           + ++   ++      + R L   L  +
Sbjct: 248 VCLVLYALLGLVGDGIVRLLERGLLSW 274



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
               P  + R +      +L   L   + +  L        P  +V+         ++  
Sbjct: 23  QTRGPARVPRWVVKTASPVLLVALWQVLSSTGLLPRDVLASPVTVVETAAGMWADGAVQS 82

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+++ + I ++   V ATL+   RR   V+   + +++++P++G +   +++F
Sbjct: 83  AVVVSGARVVAGIAIGVVTAVVLATLSGLFRRGEDVIDAPVQMLRTVPVIGLIPLLIIWF 142

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K++   LA  F         +  +++  + N+   L E +R+  L  + +  ++
Sbjct: 143 GIGEEPKIVLIGLAVTF--------PLYMNLFGGIRNVDATLVEAARTLGLGWFGQVRHV 194

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP  +  +  S+   W  +V       G+T+    GIG  +  A +  +   I+ 
Sbjct: 195 ILPSAMPQFLVGLRYSLGTAWLALV------FGETINATSGIGYEMNRAREFFETDVIVV 248

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            ++    +  + D   +LL R ++ W   F 
Sbjct: 249 CLVLYALLGLVGDGIVRLLERGLLSWRPAFS 279


>gi|268607954|ref|ZP_06141685.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus flavefaciens FD-1]
          Length = 208

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 84/211 (39%), Gaps = 11/211 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H   +D   ++     ++  V+   ++A I+ IP+G++IG+   + +      +  ++ P
Sbjct: 3   HQFAEDKGKILINIKSSVGIVLQGFLLAIIVAIPLGLFIGWNARLGNAASYITKFFSSIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
             V+ P  ++ +  +          ++   T W +    ++G         + A   +++
Sbjct: 63  PIVYIPYGIALLPTFRS----VSVFVIFLATFWPVFAGTMSGVLGVDKKVIDSAKVLNVS 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  +ILP        G       ++     +E+           G+G Y+   ++ 
Sbjct: 119 KPEMLFSVILPASLQQIFLGCNQGLSVSFILLTSAEMIGARD------GMGYYVKYYSDF 172

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           G +   + G+L++   V+A+  FL++ L  Y
Sbjct: 173 GDYTRTITGLLVIGFVVIAVT-FLFNKLQSY 202



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 69/192 (35%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L   +++++           + RLG     I     SIP + ++ + +       
Sbjct: 19  SVGIVLQGFLLAIIVAIPLGLFIGWNARLGNAASYITKFFSSIPPIVYIPYGIALL---- 74

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                     ++F IF +  W +       +  + + + + ++   +S  +  + + +P 
Sbjct: 75  ----PTFRSVSVFVIFLATFWPVFAGTMSGVLGVDKKVIDSAKVLNVSKPEMLFSVILPA 130

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+  +       +S  +  + ++EMI   D      G+G Y+       D    +  +L 
Sbjct: 131 SLQQIFLGCNQGLSVSFILLTSAEMIGARD------GMGYYVKYYSDFGDYTRTITGLLV 184

Query: 248 MLGVIFLYDQLL 259
           +  V+     L 
Sbjct: 185 IGFVVIAVTFLF 196


>gi|291561830|emb|CBL40630.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 256

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 93/248 (37%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           ++ FP +  +LA   V  I+    +        P  +       L    L +    + LR
Sbjct: 6   KKYFPPLIGILAVFAVWYIVCRAGILSSYVLPSPGRVFQSFCKMLQSGELFRDLRISFLR 65

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    VI+ +  F +  L A           ++   +++P L  +   +++       K 
Sbjct: 66  VGKGFVIAFILAFAFGMLRAMIPASAGYYEYLVQFFKNVPPLSMIPLLILWCGIGETTKT 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   LA+ F         M  ++ +      + L EV   F  +  QKF+ + +P++M  
Sbjct: 126 VIIVLASFF--------PMYLNIVKGFTGCDQKLLEVGTMFGYTERQKFFRIMLPYAMAD 177

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M + +   W  ++ +EM+          G+G  I  A +      ++  +  +   
Sbjct: 178 ILVGMRIGLGYSWRAIIGAEMVAAST------GLGHMILFAQQMPRTDKVIVGIFAIGIA 231

Query: 252 IFLYDQLL 259
            +L D++ 
Sbjct: 232 GYLTDRIF 239



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +  +++     G+       S G +   F        +     I+  RV    +IA I+ 
Sbjct: 18  VFAVWYIVCRAGILSSYVLPSPGRVFQSFCKMLQSGELFRDLRISFLRVGKGFVIAFILA 77

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
              G+     P  +   +   Q     P     PL++              +++++  + 
Sbjct: 78  FAFGMLRAMIPASAGYYEYLVQFFKNVPPLSMIPLLILWCGIGETTK----TVIIVLASF 133

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N++ G +       EV + F  T  + +  I+LP      + G     G +W A 
Sbjct: 134 FPMYLNIVKGFTGCDQKLLEVGTMFGYTERQKFFRIMLPYAMADILVGMRIGLGYSWRAI 193

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +E+ +       +TGLG  I  + +     +V++G+  +       +R  
Sbjct: 194 IGAEMVA------ASTGLGHMILFAQQMPRTDKVIVGIFAIGIAGYLTDRIF 239


>gi|312882313|ref|ZP_07742057.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370026|gb|EFP97534.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 280

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  +S+L       +AA    L  +L P+LD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTMSVLIGVPVGIMAAHRPWLYTILRPVLDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGMTKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVIRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 18/242 (7%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F  +     +     I W+       +     ++  I+N   +Q++L    L       V
Sbjct: 48  FKWMPPALPILLTAAIAWYLHRSIPLVVFVVAALLTILNLGYWQEMLETFVL-------V 100

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                ++ +I +PVGI    RP + + ++P   L+   P  V+    +  +  + L    
Sbjct: 101 FAATTMSVLIGVPVGIMAAHRPWLYTILRPVLDLMQTVPTFVYL---IPTLVLFGLGIVP 157

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L   +IF     I      G +  P +  E   +F  +  +    + LP   P  + G 
Sbjct: 158 GLISTIIFAIAAPIRL-TYLGMTKVPEELIEAGKAFGASRMKLLFKVELPAAMPSIMAGV 216

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 + +  +++ +           GLG  +  +    +  +     L +    + L+
Sbjct: 217 TQCIMLSLSMVVIAALVG-------ADGLGKPVIRALNTVNISQGFEAGLAIVLVAIILD 269

Query: 571 RF 572
           R 
Sbjct: 270 RL 271


>gi|159898102|ref|YP_001544349.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891141|gb|ABX04221.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
          Length = 274

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 17/240 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++    +       P  +       L   +L Q+ SRT +  L    ++   + V   +
Sbjct: 48  GLVAWQQYPAFVLPTPEAVASRWWQELTQGALLQHTSRTLIEALGGFGLAFSASLVLGYI 107

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A    L  ++ P L I+Q+IPI+      +++       K++ A L   F         
Sbjct: 108 LAHWHWLDRIVSPQLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFF--------P 159

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M  S+  +L ++PRD+ E++     + WQ  W + +P ++PG+   +   ++      V 
Sbjct: 160 MLSSVIVALRSVPRDIREMAAISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVV 219

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           +E I   +      G+G+ I +A    D   I  A+LT+  + F + QL   L R ++ W
Sbjct: 220 AEFIGGRE------GLGALINIARGLFDTPLIFAALLTLGLLTFGFYQLAMWLERRLVTW 273



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 74/236 (31%), Gaps = 16/236 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              +    L S++    +  +       G+     + +                +  G +
Sbjct: 20  RRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVLPTPEAVASRWWQELTQGAL 79

Query: 386 ------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+   +    +A    + +G  +     +   + P   ++ A P     PL++ 
Sbjct: 80  LQHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAVAPLILI 139

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V            L+    T + +L +VI    + P D +E+A+      W+    I L
Sbjct: 140 WVGA----DLRAKLLVAALVTFFPMLSSVIVALRSVPRDIREMAAISGANRWQSLWQIEL 195

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           P   P    G  T    A   ++V+E            GLGA I  +      P +
Sbjct: 196 PLALPGIFGGIKTGLALATTGAVVAEFIGGRE------GLGALINIARGLFDTPLI 245


>gi|15966326|ref|NP_386679.1| putative transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307307796|ref|ZP_07587525.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|15075597|emb|CAC47152.1| Putative glycine-betaine and choline ABC transporter, permease
           component [Sinorhizobium meliloti 1021]
 gi|306901662|gb|EFN32264.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 287

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 29/270 (10%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--------- 373
                     +  +  +    L   +  +  G+   IA+  +  I     +         
Sbjct: 9   PPLRSSLVLRRKRALPKTPTALGRTFTTITLGLPAVIAFALLWEIAPRAGWINALFFPPL 68

Query: 374 QDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             VL V+W             I++ R  +  ++A +  +P+G  +G             Q
Sbjct: 69  SQVLAVLWEMIVSGQLADHIGISLERAAIGFLLACVTAVPLGFLMGRYSLFEKASDFLVQ 128

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L         P+ +  +     +       +  +   +++L N I G  +      + A
Sbjct: 129 TLRNTSQFALLPVFIIVLGIGEASK----IAITFYAAVFFLLINTIVGVKSVDPLLVKAA 184

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   + W  ++ +I P   P  V GA      +  + I +E+ +        +G+G  I
Sbjct: 185 RSMGTSDWDLFKKVIFPSAIPSIVAGARLGVKTSLFSVIAAEMLA------AQSGIGYLI 238

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             S+       +  G+L +    L LN  L
Sbjct: 239 QHSSLMLETDRMYAGILTLTIIGLLLNYLL 268



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           ++AF L+  I             P   V  V   + V   L  +   +  R     +++ 
Sbjct: 44  VIAFALLWEIAPRAGWINALFFPPLSQVLAVLWEMIVSGQLADHIGISLERAAIGFLLAC 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L  +          ++  +++      L   ++             E + I 
Sbjct: 104 VTAVPLGFLMGRYSLFEKASDFLVQTLRNTSQFALLPVFIIVLGIG--------EASKIA 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F + V+ +  +    + ++   L + +RS   S W  F  +  P ++P +V    + +
Sbjct: 156 ITFYAAVFFLLINTIVGVKSVDPLLVKAARSMGTSDWDLFKKVIFPSAIPSIVAGARLGV 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL- 259
               F V+A+EM+          GIG  I  +    +   +   +LT+  +  L + LL 
Sbjct: 216 KTSLFSVIAAEMLA------AQSGIGYLIQHSSLMLETDRMYAGILTLTIIGLLLNYLLV 269

Query: 260 --FRPMIVW 266
              R    W
Sbjct: 270 AGERRATRW 278


>gi|89076527|ref|ZP_01162838.1| ABC-type proline/glycine betaine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|330448148|ref|ZP_08311796.1| choline ABC transporter, permease protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|89047803|gb|EAR53400.1| ABC-type proline/glycine betaine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|328492339|dbj|GAA06293.1| choline ABC transporter, permease protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 280

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 95/244 (38%), Gaps = 15/244 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              ++F  +   L I I   L   +         V    + +      Q    T + + +
Sbjct: 43  FLVDVFKWMPPALPILITAALAWYLHRKISLVVFVVAALLVILNLGYWQEMLETFVLVFA 102

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A  IS+L       ++A    L  ++ PILD+MQ++P   +L  T+V F     G V G 
Sbjct: 103 ATSISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGL 159

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               IFAI            Y  +  +P DL E  ++F  S  +    + +P +MP ++ 
Sbjct: 160 ISTIIFAIAAP-----IRLTYLGITKVPEDLIEAGKAFGASRMKLLLKVELPAAMPSIMA 214

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   +      VV + ++          G+G  +  A+   ++     A L ++ V  +
Sbjct: 215 GITQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGLAIVLVAII 267

Query: 255 YDQL 258
            D+L
Sbjct: 268 LDRL 271



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           +     +   L  +     + F  +     +     + W+   
Sbjct: 10  PLGQWMEAGVDWLTINAAGLFDAISFFLETVILFLVDVFKWMPPALPILITAALAWYLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  KISLVVFVVAALLVILNLGYWQEMLETFVL-------VFAATSISVLIGVPIGIMSAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLMRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P D  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEDLIEAGKAFGASRMKLLLKVELPAAMPSIMAGITQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|329924498|ref|ZP_08279578.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
 gi|328940635|gb|EGG36954.1| putative aliphatic sulfonates transport permease protein SsuC
           [Paenibacillus sp. HGF5]
          Length = 218

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 17/231 (7%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I            L ++   + LR LS  ++  L            +     L P 
Sbjct: 1   TPLTIAKQFASLGASGELWEHFRISLLRALSGFLLGGLTGLALGLSTGLGKMAERTLDPS 60

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
             +++++P+L  +   +++F      K++   L A F I+         + +  + ++  
Sbjct: 61  FQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYV--------NAFLGIRSVDA 112

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L EVSR F+ S  Q    L VP ++P ++  + +S+   W  +V +EM+          
Sbjct: 113 KLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMMGTSA------ 166

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFR 271
           GIG  I  A        +   ++    V  L D ++ R    ++ W   ++
Sbjct: 167 GIGYMIQDARAYSQTDIVFVGIIIFAIVGKLSDSVVRRLESRLLGWRETYK 217



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 10/167 (5%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G        + P  Q+L   P     PL +        +      L++  G  + I  N 
Sbjct: 48  GLGKMAERTLDPSFQMLRTVPLLSLIPLFILWFGIGEFSK----ILMISLGAFFPIYVNA 103

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      EV+  F  +  +    +I+P   P  + G   + G +W   +V+E+  
Sbjct: 104 FLGIRSVDAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMMG 163

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                  + G+G  I ++        V +G++I        +  +  
Sbjct: 164 ------TSAGIGYMIQDARAYSQTDIVFVGIIIFAIVGKLSDSVVRR 204


>gi|256785691|ref|ZP_05524122.1| glycine betaine ABC transport system integral membrane protein
           [Streptomyces lividans TK24]
 gi|289769584|ref|ZP_06528962.1| glycine betaine ABC transport system integral membrane protein
           [Streptomyces lividans TK24]
 gi|289699783|gb|EFD67212.1| glycine betaine ABC transport system integral membrane protein
           [Streptomyces lividans TK24]
          Length = 648

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 140/452 (30%), Gaps = 46/452 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S+    +    A  S R+  VL P+LD MQ +P   +L   V+ F 
Sbjct: 143 TMQTLALMVVAVLASVAVGALLGLAAGLSDRMDRVLRPVLDTMQVLPAFAYLLPVVLVFG 202

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L    R++ E   S   +  Q+     
Sbjct: 203 IGVP--------AAVLATVVYAAPPMARLTSLGLRGADREVLEAVESLGTTARQRLLTAR 254

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 255 IPLARKELLLGVNQTIMMALSMAVIASVIGAG-------GLGDRVYQALASVDVGAALAA 307

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL---------YLFRKTNFL 295
            + ++ +  + D    R       +             +W+             R   FL
Sbjct: 308 GIPIVLLAVVLD----RVTGAAGERL----GESGKSPVTWLYALVVAAAVALAGRLAGFL 359

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGV------IRFHFPENFLQLCSNQRVSYMLDIFWF 349
            +      N   P++  V  +   L            +  +F     N     +  + W+
Sbjct: 360 DWPDGWDLNIAEPVNRAVDWMTAHLYSGVPVVGGTADWAAHFTSWVLNPLREGLQWLPWW 419

Query: 350 CVVCGVAIGI----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            V+  VA        W++    V       VL V      T+ +V+  + +  ++    G
Sbjct: 420 SVLLIVAALAWLIGTWRTALTAVLAMAAIGVLGVWNPSLDTLSQVLAAVAVTLVVGFATG 479

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I           ++P   +    P  V+   VV+              +  +        
Sbjct: 480 IAAARSDRFERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI-- 537

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                G         E A S   T  +  R +
Sbjct: 538 --TAQGLRQVDPAAMESARSLGATSGQQLRQV 567



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             + +L++  +  L+   +          +    + V  +   +  T  ++L+A+ ++L+
Sbjct: 418 WWSVLLIVAALAWLIGTWRTALTAV----LAMAAIGVLGVWNPSLDTLSQVLAAVAVTLV 473

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F     AA+S R   +L P+LD+ Q++P   +L   V  F       V  A + A+ A
Sbjct: 474 VGFATGIAAARSDRFERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPA 533

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +             Q L  +     E +RS   +  Q+   + 
Sbjct: 534 VVRI--------TAQGLRQVDPAAMESARSLGATSGQQLRQVQ 568


>gi|209516853|ref|ZP_03265703.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502669|gb|EEA02675.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 294

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 91/285 (31%), Gaps = 25/285 (8%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +  +   R     R   P   +          +L +  F ++   A  + W    ++   
Sbjct: 16  DVAQNPTRPRSAARGRKPYRGMPGEGPTAWLSVLCVAGFALLWWTAPHLRWIPPLFLPAP 75

Query: 371 FTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                     W G I            +  RV     +AS+  IPVGI +G        +
Sbjct: 76  DAVWHAFVDAWNGRIQGGLPLSEHLLWSAIRVFGAFALASVTAIPVGILMGVSRIARGLL 135

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  +     P   + PLVV               +++       I     AG  +   +
Sbjct: 136 DPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIWLACFAPIAMAARAGVRSASVE 191

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A S      +   +++LP   P  +TG   A G  W   + +E+ +       T G
Sbjct: 192 QVNAAWSLGANFRQLVLHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAG 245

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           LG  +  ++       VV+G++++       +   R L   L  +
Sbjct: 246 LGQMVLNASSFLRTDVVVMGIVLIGLIAWLFDLGMRALERRLVPW 290



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   + +R+  A  ++ +       L   SR    +L P L+  + +P L +L   V
Sbjct: 96  LSEHLLWSAIRVFGAFALASVTAIPVGILMGVSRIARGLLDPPLEFYRPLPPLAYLPLVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   +  Q  
Sbjct: 156 IWFGID--------ETAKIVVIWLACFAPIAMAARAGVRSASVEQVNAAWSLGANFRQLV 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 208 LHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 261

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + +L+D   + L R ++ W  K
Sbjct: 262 VVMGIVLIGLIAWLFDLGMRALERRLVPWKGK 293


>gi|297197917|ref|ZP_06915314.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197717139|gb|EDY61173.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 299

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 91/282 (32%), Gaps = 21/282 (7%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +P      +        R   P    +      +  +  +     V    +  +   I  
Sbjct: 28  APAPAPDLEPIVPTSSRRTRVPRWLRRTTGPVLLLALWQLLSSTGVLTADVLASPGRIAQ 87

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +         L        ++ RV   +++ ++I   + +  G        +    Q+L 
Sbjct: 88  VAGDLVADGSLTSA--MTTSLQRVTGGLLLGTLIGTGLALVSGLFRVGEDVVDAPVQMLR 145

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +                ++  G  + +  NV AG         E   S 
Sbjct: 146 TVPFVGLIPLFIIWFGIGEAPK----IAIITLGVTFPLYLNVYAGIRGVDAQLIEAGESL 201

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++ W   R++ILPG  P  +TG   + G AW A + +E  +        +G+G  + ++
Sbjct: 202 GLSRWGLVRHVILPGALPGALTGLRYSLGIAWLALVFAEQVN------ADSGIGFLMVQA 255

Query: 547 TEKGSFPEVVLGVLIMCCFVLA-------LNRFL--WHPLYL 579
            +      +V+ +++     L        L R L  W P + 
Sbjct: 256 RDFLRTDVIVVCLIVYAFLGLLADFVVRSLERLLLQWRPTFT 297



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 87/232 (37%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I  +    +   SL    + +  R+   +++  L     A ++   R    V+ 
Sbjct: 79  LASPGRIAQVAGDLVADGSLTSAMTTSLQRVTGGLLLGTLIGTGLALVSGLFRVGEDVVD 138

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++F           E   I  I     + +  ++Y  +  +
Sbjct: 139 APVQMLRTVPFVGLIPLFIIWFGIG--------EAPKIAIITLGVTFPLYLNVYAGIRGV 190

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  LS W    ++ +P ++PG +  +  S+   W  +V +E +        
Sbjct: 191 DAQLIEAGESLGLSRWGLVRHVILPGALPGALTGLRYSLGIAWLALVFAEQVNADS---- 246

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             GIG  +  A        I+  ++    +  L D +   L R ++ W   F
Sbjct: 247 --GIGFLMVQARDFLRTDVIVVCLIVYAFLGLLADFVVRSLERLLLQWRPTF 296


>gi|163743649|ref|ZP_02151025.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Phaeobacter gallaeciensis 2.10]
 gi|161383120|gb|EDQ07513.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Phaeobacter gallaeciensis 2.10]
          Length = 524

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 90/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +V+ +I ++ + +    +           L    L + +  T   + +  ++ +L    
Sbjct: 296 PVVMLVIVVMAYRLAGPRIAI-FTAASLAYLAFMGLWELSMITVALIGAGAMLCILIGVP 354

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +     KS+R   V  P+LD MQ++P   +L   + +F    P  V+        A    
Sbjct: 355 FGIWFGKSKRAYAVAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVL--------ATLIF 406

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P   +E + +F  S  Q  + + +P ++P ++  +  ++     
Sbjct: 407 AMPPVIRLTALGMRGVPDATKEAAIAFGCSRRQLLFNVELPLALPSIMTGINQTILMSLS 466

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I          G+G+ I  +++       L   L +L    + D++
Sbjct: 467 MVVIASLI-------GADGLGALILESLQYAAKGQGLLGGLAILLCAMVIDRI 512



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    +V         +   +      Y   + +  L  IT+  +    ++  +I +P
Sbjct: 295 WPVVMLVIVVMAYRLAGPRIAIFTAASLAYLAFMGLWELSMITVALIGAGAMLCILIGVP 354

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GIW G      +  +P    +   PA V+   +++          L   +         
Sbjct: 355 FGIWFGKSKRAYAVAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIF----AMPP 410

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P+  KE A +F  +  +    + LP   P  +TG       + +  ++
Sbjct: 411 VIRLTALGMRGVPDATKEAAIAFGCSRRQLLFNVELPLALPSIMTGINQTILMSLSMVVI 470

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLGA I ES +  +  + +LG L +    + ++R 
Sbjct: 471 ASLIG-------ADGLGALILESLQYAAKGQGLLGGLAILLCAMVIDRI 512


>gi|114705345|ref|ZP_01438253.1| Binding-protein-dependent transport systems inner membrane
           component [Fulvimarina pelagi HTCC2506]
 gi|114540130|gb|EAU43250.1| Binding-protein-dependent transport systems inner membrane
           component [Fulvimarina pelagi HTCC2506]
          Length = 305

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 19/245 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
             F N    L F  V+G+I     G            +    +D+  L      T   ++
Sbjct: 41  DAFLNAVPWLIFAAVLGLIAWRTAGRGMAI----FTVLALAFIDMIGLWSETMTTLSMII 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+V  ++        AA+S +   +L PILDIMQ+IP   +L   V+ F     G V G
Sbjct: 97  TAVVFCIVLGVPLGIAAARSDKFLSILRPILDIMQTIPSFVYLVPIVMLFGV---GTVPG 153

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                IFA     +  +       + N+  DL E +++F  +  Q  W + +P ++  ++
Sbjct: 154 VIATIIFA-----LPPIIRLTNLGIRNVRGDLIEAAKAFGSTPRQILWEVQLPLALRTIM 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      VV + +I  G       G+G  +   +    +       + ++ +  
Sbjct: 209 AGLNQTLMLALSMVVIAALIGAG-------GLGLTVNTGLGRLAVGTATAGGVGIVLLAI 261

Query: 254 LYDQL 258
           + D++
Sbjct: 262 ILDRI 266



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 95/263 (36%), Gaps = 13/263 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSN---QRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           P ++ V    R   V  F      +Q   +   Q +   L+   + +   V   IAW++ 
Sbjct: 5   PFADWVDDFVRGFLVPTFRPVFRAMQEPVDFLMQNLDAFLNAVPWLIFAAVLGLIAWRTA 64

Query: 365 GYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           G  +  FT   + ++  +G       T+  ++  ++   ++ +P+GI         S ++
Sbjct: 65  GRGMAIFTVLALAFIDMIGLWSETMTTLSMIITAVVFCIVLGVPLGIAAARSDKFLSILR 124

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   P+ V+   +V       +   +   +         I+     G      D 
Sbjct: 125 PILDIMQTIPSFVYLVPIVMLFGVGTVPGVIATIIF----ALPPIIRLTNLGIRNVRGDL 180

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTG 538
            E A +F  T  +    + LP      + G       A +  +++ +   G + L   TG
Sbjct: 181 IEAAKAFGSTPRQILWEVQLPLALRTIMAGLNQTLMLALSMVVIAALIGAGGLGLTVNTG 240

Query: 539 LGAYIAESTEKGSFPEVVLGVLI 561
           LG     +   G    V+L +++
Sbjct: 241 LGRLAVGTATAGGVGIVLLAIIL 263


>gi|149181988|ref|ZP_01860475.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1]
 gi|148850333|gb|EDL64496.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1]
          Length = 276

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYASRTTLRMLSAMVISL 80
            +     +  I ++L   +       I  ++ +  L    L + A  T   ++ A + S+
Sbjct: 46  FVWVPAEVMAIILILLAWKFAGKGVAIFTLIGVFYLGSVDLWEDAMLTLAVVIVATLFSI 105

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L+AKS  L  V+ PILD MQ++P   +L   ++ F           E+ A+ 
Sbjct: 106 VLGVPLGILSAKSEALNKVVRPILDFMQTLPSFVYLIPAILLFGLG--------EVPAVI 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           + F             ++  +P D+ E +R+F  + WQ    + +P ++P ++  +  ++
Sbjct: 158 STFVFATPPAVRMTSLAIRQVPADMVEAARAFGSTSWQMLTKVQLPVAVPTIMAGINQTI 217

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  V + MI         PG+GS +   I   ++   L   L ++ +  + D++
Sbjct: 218 MLALSMAVIASMI-------GAPGLGSTVLAGISSVNVGLGLVGGLGIVVLAIILDRI 268



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 86/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V+ +       V+  + I +AW+  G  V  FT   V Y+  +       +T+  V+V  
Sbjct: 42  VADIFVWVPAEVMAIILILLAWKFAGKGVAIFTLIGVFYLGSVDLWEDAMLTLAVVIVAT 101

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           + + ++ +P+GI       ++  ++P    +   P+ V+    +       +   +   +
Sbjct: 102 LFSIVLGVPLGILSAKSEALNKVVRPILDFMQTLPSFVYLIPAILLFGLGEVPAVISTFV 161

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +          P D  E A +F  T W+    + LP   P  + G     
Sbjct: 162 F----ATPPAVRMTSLAIRQVPADMVEAARAFGSTSWQMLTKVQLPVAVPTIMAGINQTI 217

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A + ++++ +           GLG+ +       +    ++G L +    + L+R 
Sbjct: 218 MLALSMAVIASMIG-------APGLGSTVLAGISSVNVGLGLVGGLGIVVLAIILDRI 268


>gi|86738967|ref|YP_479367.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. CcI3]
 gi|86565829|gb|ABD09638.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. CcI3]
          Length = 280

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 13/257 (5%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R  G  R+  PE           +    +  F +V   ++       G         + 
Sbjct: 20  PRGSGGRRWIPPEVRRFTGPALLFAAWWTVTGFGLVSDQSLASPAAVFG---AGRELWNS 76

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I+++R  V +I+   I + + +  GF       +      L   P     PL
Sbjct: 77  GELLDSLGISLYRCGVGLILGVTIGLTLAVIAGFFRAGQDVVDSAMNFLRTIPVIALLPL 136

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +             L+  G  + I  N  +          E   +F +  +   R 
Sbjct: 137 IIVWIGIG----EEAKIFLITVGVSFPIYMNTYSAIRGVDIKLVEAGQTFGLGRFGLIRR 192

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+PG  P ++ G   A G AW   + +E  +         G+G  +  +        +V
Sbjct: 193 VIVPGALPGFLVGLRWALGVAWLLLVFAEQVNTDK------GIGYLLNSAQSWNRTDIMV 246

Query: 557 LGVLIMCCFVLALNRFL 573
           L ++I     L  +  +
Sbjct: 247 LCLVIYGILGLVSDGMV 263



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 90/251 (35%), Gaps = 17/251 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F     +    L   Q    P  +        +   L      +  R    +++ +  
Sbjct: 41  LLFAAWWTVTGFGLVSDQSLASPAAVFGAGRELWNSGELLDSLGISLYRCGVGLILGVTI 100

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A +A   R    V+   ++ +++IP++  L   +V+            E A IF I
Sbjct: 101 GLTLAVIAGFFRAGQDVVDSAMNFLRTIPVIALLPLIIVWIGIG--------EEAKIFLI 152

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  + Y ++  +   L E  ++F L  +     + VP ++PG +  +  ++  
Sbjct: 153 TVGVSFPIYMNTYSAIRGVDIKLVEAGQTFGLGRFGLIRRVIVPGALPGFLVGLRWALGV 212

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
            W  +V +E +          GIG  +  A        ++  ++    +  + D   ++L
Sbjct: 213 AWLLLVFAEQV------NTDKGIGYLLNSAQSWNRTDIMVLCLVIYGILGLVSDGMVRIL 266

Query: 260 FRPMIVWSNKF 270
            R ++ W   F
Sbjct: 267 ERTLLSWRRGF 277


>gi|325264232|ref|ZP_08130964.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium sp. D5]
 gi|324030716|gb|EGB91999.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium sp. D5]
          Length = 260

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 15/214 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  D   +      ++   V+   I  I+ +P+GI + +        +P   L+   P  
Sbjct: 57  TNPDGSVLGIHILTSLQESVLGFCIGIILGVPIGICMAWFEKFDMFFKPLFDLIKPIPPV 116

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + P+++       ++       +++       + N  +G        K VA +F  +  
Sbjct: 117 GWVPVMLMAFGLGIMSK----VTVIVIAAIVPAIINSYSGIKQMNPVHKWVAQTFGASNG 172

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  + I +P   P    G   +   +W   + +E+ +       T GLG  I      G 
Sbjct: 173 QILKTIAIPTAGPMIFAGIRVSLNASWVTLVAAELVA------STKGLGYMIQMGRMVGR 226

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              V +GVL++  F    +  L         R +
Sbjct: 227 IDLVFMGVLVIGGFGALFSWLL-----GMAERRI 255



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 95/252 (37%), Gaps = 21/252 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRD-------IVDIVPITLDVHSLPQYASR 67
              ++  L  F+L   ++  +LH + E  +P         I  +     D   L  +   
Sbjct: 11  FIISVISLAVFILFWELLTDILHLLPEKKLPSPATIVETFIYKLTNTNPDGSVLGIHILT 70

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +    +    I ++         A   +  M   P+ D+++ IP +G++   ++ F    
Sbjct: 71  SLQESVLGFCIGIILGVPIGICMAWFEKFDMFFKPLFDLIKPIPPVGWVPVMLMAFGLGI 130

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                   ++ +  I  + +     + Y  +  +    + V+++F  S  Q    + +P 
Sbjct: 131 --------MSKVTVIVIAAIVPAIINSYSGIKQMNPVHKWVAQTFGASNGQILKTIAIPT 182

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + +S++  W  +VA+E++          G+G  I +      +  +   +L 
Sbjct: 183 AGPMIFAGIRVSLNASWVTLVAAELVA------STKGLGYMIQMGRMVGRIDLVFMGVLV 236

Query: 248 MLGVIFLYDQLL 259
           + G   L+  LL
Sbjct: 237 IGGFGALFSWLL 248


>gi|162450134|ref|YP_001612501.1| putative ABC-type permease protein [Sorangium cellulosum 'So ce
           56']
 gi|161160716|emb|CAN92021.1| putative ABC-type permease protein [Sorangium cellulosum 'So ce
           56']
          Length = 271

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ---------DVLY 378
           P     +  +   +  L +    ++ G     +      I+    +              
Sbjct: 13  PVPGRPVRWDVARASGLALAGVALLFGGWGAASLWLDNAILLPSPWAMLRGFHEVVQDGT 72

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ RV+    +++   +P+ + +   P +S  + P   LL   P   + P+ +
Sbjct: 73  LLVDVAASLKRVLSGFSLSAFTAVPLALLVVSFPSLSQLLLPVLSLLRPIPPIAWVPIAI 132

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           +      + I  N + GA A  +     A           R++ 
Sbjct: 133 LWFGLGDH----PSYFVTAVAAFFPIFLNALGGARAVDSQHLRAARCLGARRLSLLRFVY 188

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  TG     G +W A + +E+ +        +GLG  I  +  +   P V +G
Sbjct: 189 LPSSLPHVWTGLKIGLGQSWMAVVTAELVA------ARSGLGHMIELNRLQLETPRVFVG 242

Query: 559 VLIMCCFVLAL 569
           + ++      +
Sbjct: 243 MSMIAIIGALM 253



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 81/239 (33%), Gaps = 14/239 (5%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +       G  ++ L        P  ++      +   +L    + +  R+LS   +S 
Sbjct: 33  GVALLFGGWGAASLWLDNAILLPSPWAMLRGFHEVVQDGTLLVDVAASLKRVLSGFSLSA 92

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                 A L      L  +L+P+L +++ IP + ++   +++F            +AA F
Sbjct: 93  FTAVPLALLVVSFPSLSQLLLPVLSLLRPIPPIAWVPIAILWFGLGDHPSYFVTAVAAFF 152

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF         +       +       +R           ++ +P S+P +   + + +
Sbjct: 153 PIF--------LNALGGARAVDSQHLRAARCLGARRLSLLRFVYLPSSLPHVWTGLKIGL 204

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W  VV +E++          G+G  I L   + +   +   M  +  +  L    L
Sbjct: 205 GQSWMAVVTAELVA------ARSGLGHMIELNRLQLETPRVFVGMSMIAIIGALMTSAL 257


>gi|27381201|ref|NP_772730.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354368|dbj|BAC51355.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 261

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 88/246 (35%), Gaps = 13/246 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   W      +       +I  +            +     ++ R+ +   +A ++ I
Sbjct: 19  GLLAIWQVASLALKNDSFPTAIEAVRAIPDILGDKESLINILASLRRMAIGFGVAVLVSI 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G    +++   P   ++   P     P+++  +       ++  +L++  G   
Sbjct: 79  PLGLLMGRSRAVAAFFNPLLMVIYPVPKAALMPIIMLWLGVG----DIAKTLVIFLGVSL 134

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++++   GA A         ++  ++  +    I+LP   P  +TG  T    A    I
Sbjct: 135 PVIYHSFEGARAVEEKMLWSGAAMGLSPLQRLVRIVLPAALPEILTGCRTGLVLALITMI 194

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH---PLYL 579
            SE+ +      R +G G  +  + + G +  V   ++I+    + L+         L  
Sbjct: 195 TSEMIA------RQSGAGNILFNALDMGQYDTVFAMIIIVGAMGICLDAIFERVRARLVR 248

Query: 580 YGTRCL 585
           +     
Sbjct: 249 WSEPQF 254



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 93/265 (35%), Gaps = 19/265 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           L    +RR  P +F  +  + +  + ++ L      T   + V  +P  L          
Sbjct: 3   LLATSARRAAP-VFACIGLLAIWQVASLALKNDSFPTA-IEAVRAIPDILGDKESLINIL 60

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  RM     +++L +     L  +SR +     P+L ++  +P    +   +++    
Sbjct: 61  ASLRRMAIGFGVAVLVSIPLGLLMGRSRAVAAFFNPLLMVIYPVPKAALMPIIMLWLGVG 120

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   ++A    IF      + +  ++    +   +     +  LS  Q+   + +P
Sbjct: 121 --------DIAKTLVIFLGVSLPVIYHSFEGARAVEEKMLWSGAAMGLSPLQRLVRIVLP 172

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++      +      ++ SEMI          G G+ +  A+       +   ++
Sbjct: 173 AALPEILTGCRTGLVLALITMITSEMIA------RQSGAGNILFNALDMGQYDTVFAMII 226

Query: 247 TMLGVIFLYDQLLFR---PMIVWSN 268
            +  +    D +  R    ++ WS 
Sbjct: 227 IVGAMGICLDAIFERVRARLVRWSE 251


>gi|262374484|ref|ZP_06067758.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
 gi|262310480|gb|EEY91570.1| nitrate ABC transporter, permease [Acinetobacter junii SH205]
          Length = 263

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 23/268 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYAS 66
           ++RIF N+   L F +++ +I  +         +    P  +V      L    L Q+  
Sbjct: 10  TQRIFTNLLPWL-FPILLIVIWQVASSSGLLQSRVLPAPTSVVSAFWHLLISGELWQHVK 68

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R L  ++I      +   L   SR    +L   L ++++IP L  +   +++F   
Sbjct: 69  VSAGRALLGLLIGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGID 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P
Sbjct: 129 --------ETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILP 180

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP ++     S+   W  ++ +E I          GIG     A +      +L  +L
Sbjct: 181 GAMPSILVGFRFSLGLVWVLLIVAETIS------AQSGIGYMTMNAREFLQTDIVLVGIL 234

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKFR 271
               +  L D   Q+L R ++ W   ++
Sbjct: 235 LYALLGKLADVFAQILERYLLRWHAGYQ 262



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S+ +    Q++   PA    PLV+                L+  G  + I  N 
Sbjct: 93  GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINT 148

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +      E+  S+ ++ W+ ++ IILPG  P  + G   + G  W   IV+E  S
Sbjct: 149 YHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGFRFSLGLVWVLLIVAETIS 208

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   +G+G     + E      V++G+L+        + F
Sbjct: 209 ------AQSGIGYMTMNAREFLQTDIVLVGILLYALLGKLADVF 246


>gi|192361570|ref|YP_001982783.1| AtsB [Cellvibrio japonicus Ueda107]
 gi|190687735|gb|ACE85413.1| AtsB [Cellvibrio japonicus Ueda107]
          Length = 266

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 94/205 (45%), Gaps = 16/205 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R    + + ++       L   +R + +++ P+ + ++ +P+LG      ++F N  
Sbjct: 74  SLERTALGLSLGVVAGVSLGLLMYYARLVALLVNPLYNALRQVPLLGLTPLIGLWFGNG- 132

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  + A +F I  +  + M  + Y+ L N+     EV + +  S WQ+F  +  P 
Sbjct: 133 -------DEAKVFIIALAAFYPMVLNSYEGLRNVDGRFREVGQIYGFSRWQQFRLVLWPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245
           ++P LV  +++++   W   + SE++          G+G+ +  A A    D++ I   +
Sbjct: 186 ALPNLVTGLLLAIPFAWITCIGSELLFNAGA-----GLGNLMMTAEASARMDIILICALV 240

Query: 246 LTMLGVIFLY-DQLLFRPMIVWSNK 269
           +T+LGV+  Y   +L   ++ W  K
Sbjct: 241 VTLLGVVMNYAVSVLGNYLLRWRGK 265



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 9/190 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           C ++ R  + + +  +  + +G+ + +   ++  + P    L   P     PL+      
Sbjct: 72  CGSLERTALGLSLGVVAGVSLGLLMYYARLVALLVNPLYNALRQVPLLGLTPLIGLWFG- 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N +     ++     + ++ N   G       F+EV   +  + W+ +R ++ P   
Sbjct: 131 ---NGDEAKVFIIALAAFYPMVLNSYEGLRNVDGRFREVGQIYGFSRWQQFRLVLWPAAL 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  VTG + A   AW   I SE+           GLG  +  +        +++  L++ 
Sbjct: 188 PNLVTGLLLAIPFAWITCIGSELLFNAG-----AGLGNLMMTAEASARMDIILICALVVT 242

Query: 564 CFVLALNRFL 573
              + +N  +
Sbjct: 243 LLGVVMNYAV 252


>gi|77462729|ref|YP_352233.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77387147|gb|ABA78332.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 284

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N+ D    +LVI I+  L   +Q       +V      +          ++   ++ A V
Sbjct: 53  NVLDAAPPLLVIAILAALAWILQRNWRVTALVVAGFAFILNQGYWDETMQSLTLIVLACV 112

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +         AA   RL   + P+LD+MQ++P   +L   +V+F     G V G    
Sbjct: 113 TCMAIGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGL---GMVPGLIAT 169

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +            +  + + P  L+E + +F  +  Q+ W + +P++ P ++  + 
Sbjct: 170 VIFVLPAP-----IRLTHLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLN 224

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + ++          G+G  +  A+   +      +   ++ V  + D+
Sbjct: 225 QTIMLSLSMVVIAALVGAN-------GLGVPVVRALNTVNTALGFESGFIIVVVAIVLDR 277

Query: 258 LL 259
           +L
Sbjct: 278 ML 279



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  L +          +   W+    +V  F +            ++  +V+  +    
Sbjct: 57  AAPPLLVIAILAALAWILQRNWRVTALVVAGFAFILNQGYWDETMQSLTLIVLACVTCMA 116

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 117 IGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLIATVIFVLPA 176

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P   KE A++F  T  +    + LP  FP  +TG       + +
Sbjct: 177 ---PIRL-THLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +    +         I+    + L+R L
Sbjct: 233 MVVIAALVG-------ANGLGVPVVRALNTVNTALGFESGFIIVVVAIVLDRML 279


>gi|312141640|ref|YP_004008976.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|325673102|ref|ZP_08152796.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, permease protein [Rhodococcus equi ATCC
           33707]
 gi|311890979|emb|CBH50298.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
 gi|325556355|gb|EGD26023.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, permease protein [Rhodococcus equi ATCC
           33707]
          Length = 277

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 78/189 (41%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  R+++   +  +I  P+GI +G    +   + P+ +     P   F  L V      
Sbjct: 85  ASAQRILIGWSLGVVIGAPIGILMGRVNIVRQLLDPYIEFFRFIPPIAFVTLAVVWFGIG 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+ + + + +  + IA   +  ++  + A++      +  + ++LP   P
Sbjct: 145 ETSK----VVLIFYTSVFIVTVSTIAATVSISDNKLQAAANLGAGKLQLMKTVVLPSSVP 200

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TGA  A G ++   + +E+ +         G+G+ I ++   G      +G++++  
Sbjct: 201 GIITGARLAMGNSFLTIVSAEIVA------ADHGIGSMIWQARNYGRIDWTFVGIIVLGI 254

Query: 565 FVLALNRFL 573
                +R L
Sbjct: 255 MGFVFDRIL 263



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 90/223 (40%), Gaps = 14/223 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
           +G      P ++        +   L      +  R+L    + ++       L  +   +
Sbjct: 55  YGPTTIASPAEVWTAAKELAESGVLWTSIWASAQRILIGWSLGVVIGAPIGILMGRVNIV 114

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             +L P ++  + IP + F+T  VV+F           E + +  IF + V+ +T S   
Sbjct: 115 RQLLDPYIEFFRFIPPIAFVTLAVVWFGIG--------ETSKVVLIFYTSVFIVTVSTIA 166

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +  +I  +  + + +      Q    + +P S+PG++    ++M   +  +V++E++   
Sbjct: 167 ATVSISDNKLQAAANLGAGKLQLMKTVVLPSSVPGIITGARLAMGNSFLTIVSAEIVA-- 224

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  GIGS I  A     +      ++ +  + F++D++L
Sbjct: 225 ----ADHGIGSMIWQARNYGRIDWTFVGIIVLGIMGFVFDRIL 263


>gi|260426263|ref|ZP_05780242.1| choline ABC transporter, permease protein [Citreicella sp. SE45]
 gi|260420755|gb|EEX14006.1| choline ABC transporter, permease protein [Citreicella sp. SE45]
          Length = 278

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++++  + I     +       +       L+     +  + +   +LS+ ++ +    
Sbjct: 54  LIVILAFVAITYALQRNWKTALFVFAGFLFILNQDY-WEETTESLTLVLSSCLVCMAIGV 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA   +L   L PILD+MQ++P   +L   +V+F     G V G     IF +  
Sbjct: 113 PIGIYAAHRPKLYTYLRPILDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPA 169

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     Y  + + P+ L E + +F  +  Q  + + +P+++P ++  +  ++    
Sbjct: 170 P-----IRLTYLGVSSTPKPLLEAATAFGATSSQTLFKVELPYAVPQIMAGLNQTIMLSL 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + ++          G+G  +  A+ + +      +   ++ V  + D++L
Sbjct: 225 SMVVVAALV-------GADGLGVPVVRALNQVNTGLGFESGFVIVVVAIMLDRIL 272



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 11/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +    V    A+   W++  ++   F +            ++  V+   ++   I +P
Sbjct: 54  LIVILAFVAITYALQRNWKTALFVFAGFLFILNQDYWEETTESLTLVLSSCLVCMAIGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI+   RP + + ++P   L+   P  V+    +       +   +   + ++      
Sbjct: 114 IGIYAAHRPKLYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S+ P    E A++F  T  +    + LP   P  + G       + +  +V
Sbjct: 171 IRL-TYLGVSSTPKPLLEAATAFGATSSQTLFKVELPYAVPQIMAGLNQTIMLSLSMVVV 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +  + +         ++    + L+R L
Sbjct: 230 AALVG-------ADGLGVPVVRALNQVNTGLGFESGFVIVVVAIMLDRIL 272


>gi|150398343|ref|YP_001328810.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029858|gb|ABR61975.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 263

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 78/200 (39%), Gaps = 10/200 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+    ++ ++I IP+G+ I     +S  + P      +     + PL +      
Sbjct: 69  ASLQRLAAGYLLGNLIAIPLGLAIALNRAVSETLTPVLSFFQSIAGIAWVPLAIIWFGVG 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    ++  + F +    +++ + G    P      + S   + W     +++PG   
Sbjct: 129 KGSVLFVIANTIFFAS----IYSTVIGVRTIPRVLFRASLSHGASRWDIISNVVIPGAMV 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  T+    W A +  E+ +       T G+G    E+ +      V+LG++++  
Sbjct: 185 QILVGLRTSMAYGWRALVAGEMIAG------TDGVGYMTLEAVQWYQAEIVILGMIVIGV 238

Query: 565 FVLALNRFLWHPLYLYGTRC 584
             L ++  L+ P+     R 
Sbjct: 239 LWLLMDALLFTPIERVTVRR 258



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 14/225 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  +++     +   SL  +   +  R+ +  ++  L         A +R +   L
Sbjct: 43  KLPSPGKVLNTFTNMMADGSLMAHVWASLQRLAAGYLLGNLIAIPLGLAIALNRAVSETL 102

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P+L   QSI  + ++   +++F             + +F I  +  +   +S    +  
Sbjct: 103 TPVLSFFQSIAGIAWVPLAIIWFGVGKG--------SVLFVIANTIFFASIYSTVIGVRT 154

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           IPR L   S S   S W     + +P +M  ++  +  SM+ GW  +VA EMI   D   
Sbjct: 155 IPRVLFRASLSHGASRWDIISNVVIPGAMVQILVGLRTSMAYGWRALVAGEMIAGTD--- 211

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
              G+G     A++      ++  M+ +  +  L D LLF P+  
Sbjct: 212 ---GVGYMTLEAVQWYQAEIVILGMIVIGVLWLLMDALLFTPIER 253


>gi|325526331|gb|EGD03937.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. TJI49]
          Length = 269

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 12/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
               +  +   V   L + W     V  ++  +  + +  +   ++      +     ++
Sbjct: 13  ARAWRSIAPWLVPLALLVVWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVS 72

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R +    I   + + +G+  G        +    Q++   PA    PLV+        
Sbjct: 73  TWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI--- 129

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P  
Sbjct: 130 -DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 188

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+     
Sbjct: 189 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 242

Query: 567 LALNRF 572
              +  
Sbjct: 243 KLADVL 248



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++V  +   +     +    P  +V      +    +      +T R 
Sbjct: 17  RSIAPWLVPLALLVVWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 76

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 77  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 131 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 189 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 242

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   + R  + W   ++
Sbjct: 243 KLADVLAKWIERVTLRWHPAYQ 264


>gi|325290913|ref|YP_004267094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966314|gb|ADY57093.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 256

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 91/232 (39%), Gaps = 11/232 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L ++      G    +       I+       +  V+    I++ RV V  ++ + + +
Sbjct: 21  VLILWEIVPRLGWTSDVFLPPFSRIIQTGIDLGLFNVLIYVAISLKRVFVGFLLGTFLSL 80

Query: 403 PVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+G I  G  P +S  ++P    L++ P  + FP+ V             +  ++ + + 
Sbjct: 81  PLGFILAGALPWLSRFLRPLTVFLSSIPPFILFPIFVIISGIGEG----GIYTVIFWSSF 136

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W ILF  I G           A S + +  + +  ++LPG  P  +TG  T    ++   
Sbjct: 137 WPILFTTIVGIENVDPLLVRAAKSMNASKLQIFYKVVLPGASPTIITGVRTGLTMSFFML 196

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +E           +GLG  I  +   G    + LG +++    L LN  L
Sbjct: 197 IGAESMG------ADSGLGWVIHNAQNMGFVERIYLGAILVAGVGLLLNYAL 242



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 84/239 (35%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +++  I+  L         P   +    I L + ++  Y + +  R+    ++   
Sbjct: 18  FFLVLILWEIVPRLGWTSDVFLPPFSRIIQTGIDLGLFNVLIYVAISLKRVFVGFLLGTF 77

Query: 82  FTFVYA-TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            +      LA     L   L P+   + SIP        V+       G           
Sbjct: 78  LSLPLGFILAGALPWLSRFLRPLTVFLSSIPPFILFPIFVIISGIGEGGIYT-------- 129

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF S  W + F+    + N+   L   ++S   S  Q F+ + +P + P ++  +   +
Sbjct: 130 VIFWSSFWPILFTTIVGIENVDPLLVRAAKSMNASKLQIFYKVVLPGASPTIITGVRTGL 189

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  +F ++ +E      ++    G+G  I  A     +  I    + + GV  L +  L
Sbjct: 190 TMSFFMLIGAE------SMGADSGLGWVIHNAQNMGFVERIYLGAILVAGVGLLLNYAL 242


>gi|221638590|ref|YP_002524852.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221159371|gb|ACM00351.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 286

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N+ D    +LVI I+  L   +Q       +V      +          ++   +L A V
Sbjct: 55  NVLDAAPPLLVIVILAALAWVLQRNWRVTALVVAGFAFILNQGYWDETMQSLTLILLACV 114

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +         AA   RL   + P+LD+MQ++P   +L   +V+F     G V G    
Sbjct: 115 TCMAIGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGL---GMVPGLIAT 171

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +            +  + + P  L+E + +F  +  Q+ W + +P++ P ++  + 
Sbjct: 172 VIFVLPAP-----IRLTHLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLN 226

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++      VV + ++          G+G  +  A+   +      +   ++ V  + D+
Sbjct: 227 QTIMLSLSMVVIAALVGAN-------GLGVPVVRALNTVNTALGFESGFIIVVVAIVLDR 279

Query: 258 LL 259
           +L
Sbjct: 280 ML 281



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  L +          +   W+    +V  F +            ++  +++  +    
Sbjct: 59  AAPPLLVIVILAALAWVLQRNWRVTALVVAGFAFILNQGYWDETMQSLTLILLACVTCMA 118

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 119 IGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLIATVIFVLPA 178

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P   KE A++F  T  +    + LP  FP  +TG       + +
Sbjct: 179 ---PIRL-THLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 234

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +    +         I+    + L+R L
Sbjct: 235 MVVIAALVG-------ANGLGVPVVRALNTVNTALGFESGFIIVVVAIVLDRML 281


>gi|218510971|ref|ZP_03508849.1| taurine ABC transporter, permease protein [Rhizobium etli Brasil 5]
          Length = 269

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 10/255 (3%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F     F Q          L   W      V   +  Q          +     +     
Sbjct: 17  FTARRRFPQPSWRWAALPFLLAVWCLAASRVPSYMLPQPWEVAAEGLRWIQSGELGRPLK 76

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R       A +  + +G+  G         QP   L  A P   + PL +      
Sbjct: 77  ASLLREFGGFGAAILAAVLIGVSAGLWRPFREFAQPLLALFMAIPPIAWAPLSLIFFGLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +L+    +++++   + + +   +  G  +  +     A       ++   Y+  P   P
Sbjct: 137 YLS----IAVVIFIASAFPMAVTIQEGVLSIGSGEVRAARILGAKRFQLLAYVYFPASLP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +           AW A + +E+         + G+G  +A   + G+  +V+LG+ ++  
Sbjct: 193 FLTAALRIGFAQAWRALVAAEMIG------ASQGIGWMVAMGGQVGNSAQVLLGIALIGL 246

Query: 565 FVLALNRFLWHPLYL 579
               +   ++  +  
Sbjct: 247 TAWLMESLVFRRIER 261



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 99/271 (36%), Gaps = 16/271 (5%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHS 60
           + ++      RR     +   A   ++ +  +    +       P ++       +    
Sbjct: 11  IRSMKTFTARRRFPQPSWRWAALPFLLAVWCLAASRVPSYMLPQPWEVAAEGLRWIQSGE 70

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +    + LR       ++L   +    A   R       P+L +  +IP + +   ++
Sbjct: 71  LGRPLKASLLREFGGFGAAILAAVLIGVSAGLWRPFREFAQPLLALFMAIPPIAWAPLSL 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F   Y        L+    IF +  + M  ++ + + +I       +R      +Q  
Sbjct: 131 IFFGLGY--------LSIAVVIFIASAFPMAVTIQEGVLSIGSGEVRAARILGAKRFQLL 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            Y+  P S+P L   + +  +  W  +VA+EMI          GIG  +A+  +  +   
Sbjct: 183 AYVYFPASLPFLTAALRIGFAQAWRALVAAEMIGASQ------GIGWMVAMGGQVGNSAQ 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +L  +  +    +L + L+FR +      +R
Sbjct: 237 VLLGIALIGLTAWLMESLVFRRIERRYEGWR 267


>gi|144899731|emb|CAM76595.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 270

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 90/243 (37%), Gaps = 17/243 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + +     +    P  I   +        L  +   T  R+    V  +    +   ++ 
Sbjct: 39  VALKWSDGRLLPTPSRIFLTLADLARSGELTGHILATLQRVGLGFVFGVAAGTLLGAVSG 98

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
               +  ++ P L  +++IP + ++   +++F           E + +  I     + + 
Sbjct: 99  YWTGVRRLIDPSLQALRNIPSIAWVPMFILWFGIF--------ETSKVILIAVGVFFPIY 150

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++  ++  + R L EV R FR S  +    + +P ++P  V  +   +  GW FVVA+E
Sbjct: 151 LALSGAILGVDRKLVEVGRIFRFSHQEMITRILLPATLPTYVIALRSGLGLGWMFVVAAE 210

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSN 268
            +          G+G  +    +      IL ++     +  L D LL       + W +
Sbjct: 211 FMG------AEQGLGFLLVDGQQTGRPATILASITAFAILGKLTDWLLASVSARFLTWQD 264

Query: 269 KFR 271
            F+
Sbjct: 265 GFK 267



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 60/197 (30%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T+ RV +  +        +G   G+   +   I P  Q L   P+  + P+
Sbjct: 66  GELTGHILATLQRVGLGFVFGVAAGTLLGAVSGYWTGVRRLIDPSLQALRNIPSIAWVPM 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +     +  +      +L+  G  + I   +            EV   F  +       
Sbjct: 126 FILWFGIFETSK----VILIAVGVFFPIYLALSGAILGVDRKLVEVGRIFRFSHQEMITR 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P YV    +  G  W   + +E            GLG  + +  + G    ++
Sbjct: 182 ILLPATLPTYVIALRSGLGLGWMFVVAAEFMG------AEQGLGFLLVDGQQTGRPATIL 235

Query: 557 LGVLIMCCFVLALNRFL 573
             +          +  L
Sbjct: 236 ASITAFAILGKLTDWLL 252


>gi|270290927|ref|ZP_06197151.1| glycine betaine/carnitine/choline ABC transporter [Pediococcus
           acidilactici 7_4]
 gi|270280987|gb|EFA26821.1| glycine betaine/carnitine/choline ABC transporter [Pediococcus
           acidilactici 7_4]
          Length = 510

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 16/211 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q   +     L A+V++++     A  A + R++  +L+ I  ++Q+IP       
Sbjct: 13  SDLWQALLQHLGISLVALVLAIVIAMPLAIWATRHRKIAEILLQITGVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + AI A+    +  +  + Y  +  I   LEE + +F +   Q
Sbjct: 67  --LALLGLLIPLVGIGSVPAIIALVVYALLPIFQNTYVGITEIDPSLEEAADAFGMQPLQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +MP ++  +   +         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFRVELPTAMPVIISGIRTGLVLIIGTATLAALIGAG-------GLGNFILLGINRNDP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             IL   ++   +      LL   +  WS K
Sbjct: 178 ALILVGAISSALLAIGLSALL-NVLQRWSVK 207



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 81/217 (37%), Gaps = 13/217 (5%)

Query: 372 TYQDVLYVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           T+ +    +W   +  +   +V +++A +I +P+ IW      I+  +     +L   P+
Sbjct: 7   TFAEQKSDLWQALLQHLGISLVALVLAIVIAMPLAIWATRHRKIAEILLQITGVLQTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L++  V    +   + L +  +      I  N   G +      +E A +F +  
Sbjct: 67  LALLGLLIPLVGIGSVPAIIALVVYALL----PIFQNTYVGITEIDPSLEEAADAFGMQP 122

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P  ++G  T        + ++ +   G       GLG +I     + 
Sbjct: 123 LQKLFRVELPTAMPVIISGIRTGLVLIIGTATLAALIGAG-------GLGNFILLGINRN 175

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
               +++G +      + L+  L + L  +  + + +
Sbjct: 176 DPALILVGAISSALLAIGLSALL-NVLQRWSVKKITI 211


>gi|167041562|gb|ABZ06310.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_008G09]
          Length = 295

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 94/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++I ++  L      + +      I  + +    + +    T   +  A +I L     
Sbjct: 61  PIIILVLAGLAWIASRSILLVIGTIISFLMIGYFGMWKDTMSTLAIITVATLICLTAGIP 120

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R+   ++P+LD+MQ+IP   +L   ++       GKV G     I+A+   
Sbjct: 121 MGIFMARSTRVQAAILPVLDMMQTIPSFVYLIPILMLLG---IGKVPGLIAVCIYAVP-- 175

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  + ++  E   +F  + WQ+   + +P ++P +   +  ++     
Sbjct: 176 ---PIIRLTNLGIREVDKEALEAIDAFGATAWQRLTKVQIPLALPTIFAGVNQTIMMALA 232

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + MI V        G+G  I  AI  Q L   L   L ++ +  ++D++ 
Sbjct: 233 MVVIASMIGV-------RGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRIF 279



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 73/234 (31%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + + I     +  +A       IG I+  F       +      T+  + V  +I   
Sbjct: 58  SPWPIIILVLAGLAWIASRSILLVIGTII-SFLMIGYFGMWKDTMSTLAIITVATLICLT 116

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             IP+GI++     + + I P   ++   P+ V+   ++  +        +   + +   
Sbjct: 117 AGIPMGIFMARSTRVQAAILPVLDMMQTIPSFVYLIPILMLLGIG----KVPGLIAVCIY 172

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+     G      +  E   +F  T W+    + +P   P    G       A  
Sbjct: 173 AVPPIIRLTNLGIREVDKEALEAIDAFGATAWQRLTKVQIPLALPTIFAGVNQTIMMALA 232

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  I  +         ++  L +    +  +R  
Sbjct: 233 MVVIASMIG-------VRGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRIF 279


>gi|158312578|ref|YP_001505086.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158107983|gb|ABW10180.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 272

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++RV    ++   + + + +  GF       +      L   P     PL++  +  
Sbjct: 76  GMSLYRVGWGCVLGVAVGLALAVIAGFFRFGEDVVDSAMNFLRTIPIIALLPLIIVWIGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + +  N  AG  +      E   +F +      R +I+PG  
Sbjct: 136 G----EEAKIFLITAGVIFPVYMNTFAGIRSVDIKLVEAGRAFGLGRAGLVRRVIIPGAL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++ G   + G AW   + +E  +        +G+G  +  +        +VL ++I  
Sbjct: 192 PGFLVGLRWSLGVAWLLLVFAEQVN------TDSGIGYLLNRAQGWNRTDIMVLCLVIYG 245

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 246 ILGLLCDGLV 255



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 87/235 (37%), Gaps = 17/235 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  ++D          L      +  R+    V+ +      A +A   R    V
Sbjct: 50  RAFASPGAVLDAARELWGTGELADNLGMSLYRVGWGCVLGVAVGLALAVIAGFFRFGEDV 109

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           +   ++ +++IPI+  L   +V+            E A IF I    ++ +  + +  + 
Sbjct: 110 VDSAMNFLRTIPIIALLPLIIVWIGIG--------EEAKIFLITAGVIFPVYMNTFAGIR 161

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++   L E  R+F L        + +P ++PG +  +  S+   W  +V +E +      
Sbjct: 162 SVDIKLVEAGRAFGLGRAGLVRRVIIPGALPGFLVGLRWSLGVAWLLLVFAEQV------ 215

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
               GIG  +  A        ++  ++    +  L D   +LL R ++ W   F 
Sbjct: 216 NTDSGIGYLLNRAQGWNRTDIMVLCLVIYGILGLLCDGLVRLLERSLLSWRRGFS 270


>gi|283784761|ref|YP_003364626.1| aliphatic sulfonates ABC transporter permease [Citrobacter
           rodentium ICC168]
 gi|282948215|emb|CBG87782.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Citrobacter rodentium ICC168]
          Length = 263

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 103/263 (39%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F     V V  + + L           + V     TL V   L Q+ + +  R L   
Sbjct: 14  PWFLPAGIVAVWQLASSLGWLSGRIFPSPEGVLTAFWTLSVSGELWQHLAISAWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I          ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ET 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPVYINTWHGIRNIDRGLVEMARSYGLSGLPLFLHVILPGALPSVMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W   + ++   
Sbjct: 240 VSAQLLERVWLRWHPAYHMKEAN 262



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 22/249 (8%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLG-------- 383
           + +  R   +    WF     VA+     S+G++      + + VL   W          
Sbjct: 1   MATPTRKWLLRVAPWFLPAGIVAVWQLASSLGWLSGRIFPSPEGVLTAFWTLSVSGELWQ 60

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+   
Sbjct: 61  HLAISAWRALIGFSIGGSLGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  GT + +  N   G         E+A S+ ++G   + ++ILPG
Sbjct: 121 GI----DETAKIFLVALGTLFPVYINTWHGIRNIDRGLVEMARSYGLSGLPLFLHVILPG 176

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G  W   IV+E  S       ++G+G     + E      VV+ +++
Sbjct: 177 ALPSVMVGVRFALGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVVAIIL 230

Query: 562 MCCFVLALN 570
                   +
Sbjct: 231 YALLGKLAD 239


>gi|28872427|ref|NP_795046.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213971162|ref|ZP_03399280.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301382291|ref|ZP_07230709.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061543|ref|ZP_07253084.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302134778|ref|ZP_07260768.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855682|gb|AAO58741.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924031|gb|EEB57608.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|331017056|gb|EGH97112.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 265

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          +  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAIWQLSVSAGWLSTRILPAPSAVIEAGATLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + +  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAIWQLSVSAGWLSTRILPAPSAVIEAGATLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|146338667|ref|YP_001203715.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191473|emb|CAL75478.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 258

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 86/227 (37%), Gaps = 17/227 (7%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITM 387
             ++    +     F V   +A    + S  ++ +  T              ++   +T+
Sbjct: 10  ARSRTALGLAFFVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFGFLYDIGMTV 69

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +RVV   ++A+ I +P+G+ +G    + + ++PF       PA+ F PL++       L 
Sbjct: 70  WRVVGGFVLAAAIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELQ 129

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 L++  G+ + I+  +         D  E A +   +       ++LP   P   
Sbjct: 130 K----LLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIARVLLPSAAPDIA 185

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                  G AW   IV+E+         ++G+G  I +S    +  +
Sbjct: 186 EVLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQ 226



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 90/252 (35%), Gaps = 16/252 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            + FV+   +     +  +     P  ++      L           T  R++   V++ 
Sbjct: 21  FVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFGFLYDIGMTVWRVVGGFVLAA 80

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L    + +   L P +   + +P   F+   +++            EL  + 
Sbjct: 81  AIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG--------ELQKLL 132

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   V+ +   +  ++ N  RDL E + +   S       + +P + P +   + + +
Sbjct: 133 IIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIARVLLPSAAPDIAEVLRLVL 192

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              W +V+ +E+I          GIG  I  +    +   I++ ++ +  +  + D  LF
Sbjct: 193 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIIIGLIGLISD-FLF 245

Query: 261 RPMIVWSNKFRL 272
           +    W   ++L
Sbjct: 246 KAFNAWLFPWKL 257


>gi|326791585|ref|YP_004309406.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326542349|gb|ADZ84208.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 244

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 10/174 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ R+   ++I+++I + +G+ +G  P I+  + P        P     P+++
Sbjct: 50  MLGHIGASLQRIFWGLLISTLIGVMIGLLMGTSPVINRLLNPLIYFTYPIPKTALLPILM 109

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +       L++  T + ++  V                S   +  + + ++ 
Sbjct: 110 ILFGLGDHSK----ITLIVLITVFQVIVAVRGSVQQIDAGLYHSMRSLGASKGQMFYHVT 165

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP + P  +T    + G   +    +E       +    GLG YI +S  + ++
Sbjct: 166 LPAVLPDILTHLRLSVGTTLSVLFFAE------NYGTQHGLGYYIQDSWSRMNY 213



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 14/181 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +  +   +  R+   ++IS L   +   L   S  +  +L P++     IP    L   +
Sbjct: 50  MLGHIGASLQRIFWGLLISTLIGVMIGLLMGTSPVINRLLNPLIYFTYPIPKTALLPILM 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F      K        I  I    V+ +  ++  S+  I   L    RS   S  Q F
Sbjct: 110 ILFGLGDHSK--------ITLIVLITVFQVIVAVRGSVQQIDAGLYHSMRSLGASKGQMF 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +++ +P  +P ++ ++ +S+      +  +E            G+G YI  +    + LA
Sbjct: 162 YHVTLPAVLPDILTHLRLSVGTTLSVLFFAE------NYGTQHGLGYYIQDSWSRMNYLA 215

Query: 241 I 241
           +
Sbjct: 216 M 216


>gi|258509434|ref|YP_003172185.1| ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257149361|emb|CAR88334.1| ABC transporter, permease protein [Lactobacillus rhamnosus GG]
 gi|259650715|dbj|BAI42877.1| nitrate/sulfonate/bicarbonate ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 272

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           +      +  ++   L    F +    A+   W +   I    T       +W       
Sbjct: 13  KRVKPSVNWLKILPWLVPLAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPK 72

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+++R      I   +   +G+  G    I + +    Q+L   P     PL++  +
Sbjct: 73  NIAISLYRATAGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILM 132

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  N   G      +  E+  ++ ++    +  ++ PG
Sbjct: 133 GIG----EPAKIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPG 188

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  S       T+GLG     + E      V+L +LI
Sbjct: 189 ALANILMGVRYALGVMWTTLIVAETIS------ATSGLGYMATNAQEFMRMDTVLLCILI 242

Query: 562 MCCFVLALN 570
                   +
Sbjct: 243 YALLGKLSD 251



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           LAF++                     V    I+L     LP+  + +  R  +   I   
Sbjct: 31  LAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNIAISLYRATAGFAIGGS 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +    + +  +L   + ++++IP L  +   ++      P        A I  
Sbjct: 91  VGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGIGEP--------AKIAL 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ M  + YQ +     +L E+ R++ LS    F  +  P ++  ++  +  ++ 
Sbjct: 143 VAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPGALANILMGVRYALG 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          G+G     A +   +  +L  +L    +  L D +   
Sbjct: 203 VMWTTLIVAETIS------ATSGLGYMATNAQEFMRMDTVLLCILIYALLGKLSDMIAKS 256

Query: 259 LFRPMIVWSN 268
           L R  + W  
Sbjct: 257 LERLFLGWRQ 266


>gi|94967858|ref|YP_589906.1| ABC aliphatic sulfonate transporter, inner membrane subunit
           [Candidatus Koribacter versatilis Ellin345]
 gi|94549908|gb|ABF39832.1| ABC aliphatic sulfonate transporter, inner membrane subunit
           [Candidatus Koribacter versatilis Ellin345]
          Length = 252

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 80/208 (38%), Gaps = 11/208 (5%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +  W+G  ++M RV +   I+ ++ + +G  I +   +S         L + P+  + P+
Sbjct: 49  HSFWIGITVSMKRVAIGYAISCLLGVGLGFLITYSRFLSETAGRLIVSLQSIPSICWLPV 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +  +++ G+   I  +V +G  + P  +     +    GW+   +
Sbjct: 109 AILWFGLTEK----AILFVVVMGSLLAITISVESGLRSIPKIYSLAGRNLGANGWKLMVH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   PY ++G       AW + I  E+         T GLG  +    +     +V 
Sbjct: 165 VLLPASLPYLISGLKQGWAFAWRSLISGEMI------FVTLGLGQLLMMGRDLNDISQVF 218

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +L++      ++   +  L     R 
Sbjct: 219 AVMLLIVALGWLVDTLFFRGLERAVQRR 246



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + + +      HS     + +  R+     IS L       L   SR L      
Sbjct: 33  PTPLTVFESLRAGFSDHSFWIGITVSMKRVAIGYAISCLLGVGLGFLITYSRFLSETAGR 92

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +QSIP + +L   +++F           E A +F +    +  +T S+   L +IP
Sbjct: 93  LIVSLQSIPSICWLPVAILWFGL--------TEKAILFVVVMGSLLAITISVESGLRSIP 144

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +      R+   +GW+   ++ +P S+P L+  +    +  W  +++ EMI V       
Sbjct: 145 KIYSLAGRNLGANGWKLMVHVLLPASLPYLISGLKQGWAFAWRSLISGEMIFV------T 198

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  + +     D+  +   ML ++ + +L D L FR +     +
Sbjct: 199 LGLGQLLMMGRDLNDISQVFAVMLLIVALGWLVDTLFFRGLERAVQR 245


>gi|47570098|ref|ZP_00240756.1| sulfonate ABC transporter, permease protein SsuC [Bacillus cereus
           G9241]
 gi|47553214|gb|EAL11607.1| sulfonate ABC transporter, permease protein SsuC [Bacillus cereus
           G9241]
          Length = 282

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R      I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAVGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLE 273
           L    + W + F+ E
Sbjct: 265 LEVKFLRWRDNFKGE 279



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 79/244 (32%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L       V  + I         +        +   +    +     +   +  S+  
Sbjct: 29  KVLVRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFR 88

Query: 402 IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             VG +IG            F       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAVGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262


>gi|299069872|emb|CBJ41154.1| Binding-protein-dependent transport systems (glycine betaine and
           nitrate/sulfonate/bicarbonate) inner membrane component,
           ABC transporter, permease protein [Ralstonia
           solanacearum CMR15]
          Length = 298

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   LV       L          D    +   L   +L      +   +L+   + L 
Sbjct: 55  LVVLALVWEGGARWLDNPLLLPTFSDTAQALWAGLADGTLFARIGTSMQTLLAGYALGLA 114

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     L   SR     L  +  +   +P +  L   +V+F             + +F 
Sbjct: 115 LSCALVVLGIGSRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGNG--------SLVFV 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S VW ++ + +    ++   L  V R++ LSG      + +P + P ++  + +  +
Sbjct: 167 IVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWA 226

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASE++          G+G YI        +  +   +LT++ +  L + L+FR
Sbjct: 227 FAWRTLIASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFR 284

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 285 TLEARTVK 292



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 96/288 (33%), Gaps = 16/288 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +S         +   R    E  L +         L      VV  +      + +  
Sbjct: 12  ADISTRAPVYRTPVAFERIGVVEKPLSMAERLYAQAWLRKLTILVVLALVWEGGARWLDN 71

Query: 367 IVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISS 416
            +   T+ D    +W G    T+F  +   +   +    +G+ +                
Sbjct: 72  PLLLPTFSDTAQALWAGLADGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQD 131

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    P+ +      + +    L  +++    W +  N  AG  +  
Sbjct: 132 FLETLTAMFNPLPAIALLPIALVWFGLGNGS----LVFVIVHSVVWAVSLNTHAGFLSVS 187

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +    
Sbjct: 188 NTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            GLG YI E+      PEV  G+L +    L +   ++  L     + 
Sbjct: 246 GGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVKR 293


>gi|152986181|ref|YP_001351473.1| choline ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961339|gb|ABR83364.1| choline ABC transporter, permease protein [Pseudomonas aeruginosa
           PA7]
          Length = 279

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I ++  L+H IQ +           + +      Q    T  +++ A ++ +     
Sbjct: 53  LVLIALLVGLVHVIQRSWGLTVFALASLLLILNLGYWQETMETLAQVIFATLVCIAVGVP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA        L P+LD+MQ++P   +L  T+  F     G V G     IFA+   
Sbjct: 113 LGIVAAHKPWFYTALRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVIFAVAAP 169

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + ++P +L +  ++F  S WQ    + +P +MP +   +   +     
Sbjct: 170 -----IRLTCLGIQDVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++          G+G  +  A+   D+     A L ++ +  L D++
Sbjct: 225 MVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAILLDRV 270



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 68/210 (32%), Gaps = 11/210 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +    V     I  +W    + +        L        T+ +V+   ++   + +P
Sbjct: 53  LVLIALLVGLVHVIQRSWGLTVFALASLLLILNLGYWQETMETLAQVIFATLVCIAVGVP 112

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    +P   + ++P   L+   P  V+    +  ++ + L     L   +IF     
Sbjct: 113 LGIVAAHKPWFYTALRPLLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVIFAVAAP 169

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G    P +  +   +F  + W+    I LP   P    G       + +  ++
Sbjct: 170 IRL-TCLGIQDVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLSMVVI 228

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           + +           GLG  +  +       
Sbjct: 229 AALVG-------ADGLGKPVVNALNTADIS 251


>gi|330967525|gb|EGH67785.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 265

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          +  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAIWQLSVSAGWLSTRILPAPSAVIEAGVTLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + +  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAIWQLSVSAGWLSTRILPAPSAVIEAGVTLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|296115667|ref|ZP_06834293.1| aliphatic sulfonates transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977644|gb|EFG84396.1| aliphatic sulfonates transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 284

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 105/275 (38%), Gaps = 28/275 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS--IGYIVNHFTYQDVLYVIW 381
           R    +   Q  +++  + +    W   V  V +  AWQ+   G I+        L ++ 
Sbjct: 12  RHDVTDRVQQPAADRARAGLWRHGWQRYVSSVIVLCAWQAASWGGIIPPRILSSPLQILQ 71

Query: 382 LG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            G              I++ R    + +A ++ + + +  G      + +    Q++   
Sbjct: 72  TGWGLVGDGTLPANLEISLLRASAGLGLAVVVGVVLALVAGLSRVGENIVDAPLQVVRTL 131

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PL +               LL+  G  + +  N+  G  A      E+AS   +
Sbjct: 132 PALALVPLFILWFGIG----EWPKILLVALGAMFPVYLNLHKGIRAVDPKLMEMASILGL 187

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W   R++++PG  P ++ G   A G +W   +V+E  +        +G+G  + ++ +
Sbjct: 188 SRWATIRFVVIPGAMPDFLIGLRFAVGISWLMLVVAEQVN------AESGIGHMMMDAQD 241

Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                 +++G++I     L  +   RFL   L  +
Sbjct: 242 FLRTDIILVGLVIYGVLGLVSDQVVRFLETRLLSW 276



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 94/228 (41%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  I+      +   +LP     + LR  + + ++++   V A +A  SR    ++ 
Sbjct: 63  LSSPLQILQTGWGLVGDGTLPANLEISLLRASAGLGLAVVVGVVLALVAGLSRVGENIVD 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F      K++   L A+F ++         ++++ +  +
Sbjct: 123 APLQVVRTLPALALVPLFILWFGIGEWPKILLVALGAMFPVY--------LNLHKGIRAV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++    LS W    ++ +P +MP  +  +  ++   W  +V +E +        
Sbjct: 175 DPKLMEMASILGLSRWATIRFVVIPGAMPDFLIGLRFAVGISWLMLVVAEQV------NA 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             GIG  +  A        IL  ++    +  + DQ    L   ++ W
Sbjct: 229 ESGIGHMMMDAQDFLRTDIILVGLVIYGVLGLVSDQVVRFLETRLLSW 276


>gi|187923735|ref|YP_001895377.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714929|gb|ACD16153.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 280

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R V    I   I + +G+  G        +    Q++   PA    PLV+      
Sbjct: 82  VSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIALDSTVQMVRNIPALAMIPLVILWFGIE 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + I  N   G  +   +  E+A S+ + G+  +R++ILPG  P
Sbjct: 142 ----EQAKVFLVALGVFFPIYVNTFHGIRSVDANLIEMARSYGVKGFALYRHVILPGALP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 198 SILVGVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAA 251

Query: 565 FVLALNRF 572
                +  
Sbjct: 252 LGKLADVL 259



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 88/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    +      +T R +S   I      V        +   + L 
Sbjct: 57  LPEPLAVVKAAWSLIQSGEMWTDVKVSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIALD 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + +  + ++
Sbjct: 117 STVQMVRNIPALAMIPLVILWFGIE--------EQAKVFLVALGVFFPIYVNTFHGIRSV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E++RS+ + G+  + ++ +P ++P ++  +  +    W  ++ +E I        
Sbjct: 169 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQ 275


>gi|222080847|ref|YP_002540210.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221725526|gb|ACM28615.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 285

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V   +     I +G+ IG   H+ + + P    L   P     PL V       
Sbjct: 96  SLQRLFVGATLGITAGISIGVCIGLFSHVRAGLVPLVAALFPIPKIALLPLFVIWFGIDE 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+ FGT    +                +  SF ++ W   R I+LPG FP 
Sbjct: 156 TSK----YALIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPA 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+           G+GAYI E+       ++  GV I+   
Sbjct: 212 ILSGLRVSISIAIILLVAAEMLG------AQFGVGAYILEAGSLYDLEKLFTGVAILSMM 265

Query: 566 VLALN 570
            L +N
Sbjct: 266 GLIVN 270



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 94/268 (35%), Gaps = 24/268 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSL 61
            F      P     +A  + + +I +   G +           P  +++          L
Sbjct: 30  DFRGGGFAPTPVRGMAIAVFVILIALAEIGTRTGIVSNLTLPRPSAVLETFLQLWRTGLL 89

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+   +  R+     + +               +   LVP++  +  IP +  L   V+
Sbjct: 90  WQHLLPSLQRLFVGATLGITAGISIGVCIGLFSHVRAGLVPLVAALFPIPKIALLPLFVI 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      K           I          + Y ++ N+ R L  + +SF LS W    
Sbjct: 150 WFGIDETSKYA--------LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVR 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P ++  + +S+S     +VA+EM+          G+G+YI  A    DL  +
Sbjct: 202 KIVLPGAFPAILSGLRVSISIAIILLVAAEMLG------AQFGVGAYILEAGSLYDLEKL 255

Query: 242 LYAMLTMLGVIFLYDQL---LFRPMIVW 266
              +  +  +  + + +   + R  + W
Sbjct: 256 FTGVAILSMMGLIVNFVIGQIERRFLNW 283


>gi|115351517|ref|YP_773356.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170698693|ref|ZP_02889759.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|115281505|gb|ABI87022.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|170136397|gb|EDT04659.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 270

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA ++V  +   +     +    P  +V      +    +      +T R L    I   
Sbjct: 27  LALLVVWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGFAIGGG 86

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+   + L   + ++++IP L  +   +++F           E A +F 
Sbjct: 87  VGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFL 138

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P ++  +  ++ 
Sbjct: 139 VALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALG 198

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D L   
Sbjct: 199 LMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKW 252

Query: 259 LFRPMIVWSNKFR 271
           + R  + W   ++
Sbjct: 253 IERTTLRWHPAYQ 265


>gi|320177126|gb|EFW52141.1| Alkanesulfonates transport system permease protein [Shigella
           dysenteriae CDC 74-1112]
 gi|332093545|gb|EGI98603.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella boydii 3594-74]
          Length = 183

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 19/188 (10%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+  G        +    Q+L   P     PLV+                L+  GT + 
Sbjct: 3   LGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESAKIFLVALGTLFP 58

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I  N   G         E+A S+ ++G   + ++ILPG  P  + G   A G  W   IV
Sbjct: 59  IYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIV 118

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFL--W 574
           +E  S        +G+G     + E      VV+ +++              L R    W
Sbjct: 119 AETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRW 172

Query: 575 HPLYLYGT 582
           +P Y    
Sbjct: 173 NPAYHLKE 180



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 17/195 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   ++  SR    +L   + +++++P L  +   +++F           E A IF +  
Sbjct: 2   ILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ESAKIFLVAL 53

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +  ++   W
Sbjct: 54  GTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMW 113

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261
             ++ +E I          GIG     A +      ++ A++    +  L D   QLL R
Sbjct: 114 LTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLER 167

Query: 262 PMIVWSNKFRLERTT 276
             + W+  + L+  T
Sbjct: 168 LWLRWNPAYHLKEAT 182


>gi|323494633|ref|ZP_08099736.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
 gi|323311066|gb|EGA64227.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           brasiliensis LMG 20546]
          Length = 280

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +A+    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPIGIMASHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGMTKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAAMPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 18/227 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I W+       +     ++  I+N   +Q++L    L       V     I+ +I +P+G
Sbjct: 63  IAWYLHRSIPLMLFIVGALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPIG 115

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I    RP + + ++P   L+   P  V+    +  +  + L     L   +IF     I 
Sbjct: 116 IMASHRPWLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIR 172

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G +  P +  E   +F  +  +    + LP   P  + G       + +  +++ 
Sbjct: 173 L-TYLGMTKVPEELIEAGKAFGASRMKLLFKVELPAAMPSIMAGVTQCIMLSLSMVVIAA 231

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +           GLG  +  +    +  +     L +    + L+R 
Sbjct: 232 LVG-------ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|153833250|ref|ZP_01985917.1| glycine betaine transport system permease protein opuAB [Vibrio
           harveyi HY01]
 gi|156977390|ref|YP_001448296.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio
           harveyi ATCC BAA-1116]
 gi|148870521|gb|EDL69436.1| glycine betaine transport system permease protein opuAB [Vibrio
           harveyi HY01]
 gi|156528984|gb|ABU74069.1| hypothetical protein VIBHAR_06177 [Vibrio harveyi ATCC BAA-1116]
          Length = 280

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELIEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++           S     +   L  I     + F  +     +     I WF   
Sbjct: 10  PLGEWMETGVDWLTMNASGFFDAISIFLETIILFVVDIFKWMPPAAPIIMTAAIAWFLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  SIPLVVFIVLALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +  P +  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 TKVPEELIEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|15600570|ref|NP_254064.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104479|ref|ZP_01368397.1| hypothetical protein PaerPA_01005556 [Pseudomonas aeruginosa PACS2]
 gi|116053524|ref|YP_793851.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894480|ref|YP_002443350.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237937|ref|ZP_04931260.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719]
 gi|254242929|ref|ZP_04936251.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192]
 gi|296392237|ref|ZP_06881712.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas aeruginosa PAb1]
 gi|313111693|ref|ZP_07797487.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa 39016]
 gi|9951700|gb|AAG08762.1|AE004950_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588745|gb|ABJ14760.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169868|gb|EAZ55379.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719]
 gi|126196307|gb|EAZ60370.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192]
 gi|218774709|emb|CAW30526.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310883989|gb|EFQ42583.1| putative BC-type proline/glycine betaine transport system, permease
           component [Pseudomonas aeruginosa 39016]
          Length = 279

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I ++  L+H IQ +           + +      Q    T  +++ A ++ +     
Sbjct: 53  LVLIALLVGLVHFIQRSWGLTVFALASLLLILNLGYWQETMETLAQVIFATLVCIAVGVP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA        L P+LD+MQ++P   +L  T+  F     G V G     IFA+   
Sbjct: 113 LGIVAAHKPWFYTALRPLLDLMQTVPTFVYLIPTLTLFGL---GVVPGLISTVIFAVAAP 169

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + ++P +L +  ++F  S WQ    + +P +MP +   +   +     
Sbjct: 170 -----IRLTCLGIQDVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++          G+G  +  A+   D+     A L ++ +  L D++
Sbjct: 225 MVVIAALV-------GADGLGKPVVNALNTADISLGFEAGLAIVLLAILLDRV 270



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 78/254 (30%), Gaps = 19/254 (7%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA------- 360
           PL   +      L +    F +                + WF  +  +A+ +        
Sbjct: 9   PLGEQIAGFVDWLTLHGASFFDKISDTLEFLIHGVTNGLLWFNPLVLIALLVGLVHFIQR 68

Query: 361 -WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W    + +        L        T+ +V+   ++   + +P+GI    +P   + ++
Sbjct: 69  SWGLTVFALASLLLILNLGYWQETMETLAQVIFATLVCIAVGVPLGIVAAHKPWFYTALR 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   L+   P  V+    +  ++ + L     L   +IF     I      G    P + 
Sbjct: 129 PLLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVIFAVAAPIRL-TCLGIQDVPAEL 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   +F  + W+    I LP   P    G       + +  +++ +           GL
Sbjct: 185 LDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGL 237

Query: 540 GAYIAESTEKGSFP 553
           G  +  +       
Sbjct: 238 GKPVVNALNTADIS 251


>gi|330954780|gb|EGH55040.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 265

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++             +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAAWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLAD 240



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 97/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +    +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAAWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|260777812|ref|ZP_05886705.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605825|gb|EEX32110.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio coralliilyticus ATCC BAA-450]
          Length = 280

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPVGVMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELIEAGQAFGASKMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSIMAGITQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 18/242 (7%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F  +     +     I W+       +     ++  I+N   +Q++L    L       V
Sbjct: 48  FKWMPPALPILLTAAIAWYLHRSIPLVLFIIGALLTILNLGYWQEMLETFVL-------V 100

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                I+ +I +PVG+    RP + + ++P   L+   P  V+    +  +  + L    
Sbjct: 101 FAATTISVLIGVPVGVMAAHRPWLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVP 157

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L   +IF     I      G +  P +  E   +F  +  +    + LP   P  + G 
Sbjct: 158 GLISTIIFAIAAPIRL-TYLGITKVPEELIEAGQAFGASKMKLLFKVELPAALPSIMAGI 216

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 + +  +++ +           GLG  +  +    +  +     L +    + L+
Sbjct: 217 TQCIMLSLSMVVIAALVG-------ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILD 269

Query: 571 RF 572
           R 
Sbjct: 270 RL 271


>gi|83951335|ref|ZP_00960067.1| amino acid ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83836341|gb|EAP75638.1| amino acid ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 346

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y+ +T   +     I +        L +KS R     +P+LD++Q++P   +L   +  F
Sbjct: 153 YSVQTLSIIFVCTAICVCLGVPIGILMSKSDRFQKWTIPVLDMLQTLPTFVYLIPLIFLF 212

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                            AI    +  +       +  + RD+ E + +F ++  QK + +
Sbjct: 213 SVTESKLYG-------IAIILYAIVPVIRLTDLGIRLVDRDVIEAADAFGMTRRQKLFGV 265

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L 
Sbjct: 266 EIPLALPNIMAGINQTIMMSLAMVVIASLVS-------APGLGVLVLRGIRNLELGVGLV 318

Query: 244 AMLTMLGVIFLYDQL 258
           +   ++ +  + D++
Sbjct: 319 SGFCIVLIAIILDRV 333



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 71/229 (31%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              +    ++    +   W+ +  +   F +   +        T+  + V   I   + +
Sbjct: 114 WFIMIPLLLLGTWLLSRQWRMVLLVAISFLFLGFIDHYSYSVQTLSIIFVCTAICVCLGV 173

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +           P   +L   P  V+    +  +  + +  +    + +I     
Sbjct: 174 PIGILMSKSDRFQKWTIPVLDMLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILYAIV 230

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      D  E A +F +T  +    + +P   P  + G       +    +
Sbjct: 231 PVIRLTDLGIRLVDRDVIEAADAFGMTRRQKLFGVEIPLALPNIMAGINQTIMMSLAMVV 290

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           ++ + S         GLG  +            ++    +    + L+R
Sbjct: 291 IASLVS-------APGLGVLVLRGIRNLELGVGLVSGFCIVLIAIILDR 332


>gi|325291599|ref|YP_004277463.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325059452|gb|ADY63143.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 257

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 10/169 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RVV   ++AS++ +PVGI +G    + + ++PF       PA+ F PL++     
Sbjct: 65  GMTIWRVVGGFVLASLVAVPVGIAMGAYKPVEALLEPFVSFARYLPASAFVPLLILWAGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       L++  G  + I+  V    +    D  E A +         R +++P   
Sbjct: 125 GEMQK----LLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           P          G AW   IV+E+         ++G+G  I  S    + 
Sbjct: 181 PDIAEILRLVLGWAWTYVIVAELIG------ASSGIGYMIINSQALMAT 223



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 77/233 (33%), Gaps = 15/233 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSL 61
           +  + P   S RIF  I   + F    G   +           P  ++      L     
Sbjct: 1   MQPLQPIKNSTRIFLGILFFVLFFSAWGFATLGGFVSPTFLADPITMLKDGIYLLTDQGF 60

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T  R++   V++ L            + +  +L P +   + +P   F+   ++
Sbjct: 61  ASDIGMTIWRVVGGFVLASLVAVPVGIAMGAYKPVEALLEPFVSFARYLPASAFVPLLIL 120

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E+  +  IF   V+ +   +  ++    RDL E + +          
Sbjct: 121 WAGIG--------EMQKLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVR 172

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            + +P + P +   + + +   W +V+ +E+I          GIG  I  +  
Sbjct: 173 RVLIPANAPDIAEILRLVLGWAWTYVIVAELIGASS------GIGYMIINSQA 219


>gi|319790810|ref|YP_004152450.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593273|gb|ADU34339.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 263

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 15/238 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   V        + S+   +N         ++     T+ R+V   ++AS+  + +G  
Sbjct: 35  WVSRVFLPTPQATFASLLEGLNLSGGSGNGELLAFTQATVGRMVEGWLLASLFGVVLGAA 94

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG  P + + IQP  + +   PA+   PL +S            +  ++ FG  W +L  
Sbjct: 95  IGVSPAVRAWIQPTLEFIRPLPASALLPLAISIFGLNPG----MVLFVVAFGAMWPVLLA 150

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G +A      EVA    ++   +   + LP   P  + G   A   A   ++V E+ 
Sbjct: 151 TVHGFAAVEPRLAEVARCLQMSRAAYIWKMGLPNAMPDILAGMRLALTIALIVAVVGEMI 210

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +        +GLG  I  +       ++  G++++       N  L      +  + L
Sbjct: 211 A------SQSGLGQAILLAARAFRASDLFAGIVLLGLIGFVSNALL-----AFAEKRL 257



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   T  RM+   +++ LF  V       S  +   + P L+ ++ +P    L  
Sbjct: 64  GELLAFTQATVGRMVEGWLLASLFGVVLGAAIGVSPAVRAWIQPTLEFIRPLPASALLPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F  L PG V+       F +    +W +  +       +   L EV+R  ++S   
Sbjct: 124 AISIFG-LNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAA 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W +G+P +MP ++  M ++++      V  EMI          G+G  I LA +    
Sbjct: 176 YIWKMGLPNAMPDILAGMRLALTIALIVAVVGEMIA------SQSGLGQAILLAARAFRA 229

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
             +   ++ +  + F+ + LL    + ++ W  
Sbjct: 230 SDLFAGIVLLGLIGFVSNALLAFAEKRLLRWQQ 262


>gi|288961125|ref|YP_003451464.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288913433|dbj|BAI74920.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 270

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 91/252 (36%), Gaps = 17/252 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L    +       +    P  I+           L  +   +  R+ + + I + 
Sbjct: 30  LALLALWQASVGFGWISTRSIPSPSQILTAFWDLTVSGELAVHLLVSLGRVSAGLAIGVS 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A +A  SRR    L  +L +++++P L  +   +++F      K        I  
Sbjct: 90  AGTVCALIAGLSRRGEDALDALLQMLRTLPHLALVPLFILWFGIGETPK--------IAL 141

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +++  +  +   + E   +  L+ W+    + +P ++P  +  +  ++ 
Sbjct: 142 VALGTAFPIYLNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGALPAFLTGLRYALG 201

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V  E I          GIG     A +      I+ A++    +  L D   +L
Sbjct: 202 VAWLSLVVGEQINASS------GIGYLAMTAREFLRTDVIIVALIVYAILGLLADLIVRL 255

Query: 259 LFRPMIVWSNKF 270
           + R  +VW   F
Sbjct: 256 IERSALVWRPAF 267



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 71/204 (34%), Gaps = 19/204 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV   + I         +  G        +    Q+L   P     PL +     
Sbjct: 74  LVSLGRVSAGLAIGVSAGTVCALIAGLSRRGEDALDALLQMLRTLPHLALVPLFILWFGI 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N+ AG         E  S+  +T W     +ILPG  
Sbjct: 134 GETPK----IALVALGTAFPIYLNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGAL 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++TG   A G AW + +V E  +       ++G+G     + E      +++ +++  
Sbjct: 190 PAFLTGLRYALGVAWLSLVVGEQIN------ASSGIGYLAMTAREFLRTDVIIVALIVYA 243

Query: 564 CFVLALN---------RFLWHPLY 578
              L  +           +W P +
Sbjct: 244 ILGLLADLIVRLIERSALVWRPAF 267


>gi|302540955|ref|ZP_07293297.1| aliphatic sulfonates ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458573|gb|EFL21666.1| aliphatic sulfonates ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 270

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 88/270 (32%), Gaps = 21/270 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L   R   P    +      +  +  +     V    +  +  +I              
Sbjct: 11  PLSARRRSVPRWLRRTTGPLFLLLLWQVCSATGVLPSDMLASPGTIAG--TASGMIQDGT 68

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +++ RV+  ++I  II + + +  G        +    Q+    P     PL +
Sbjct: 69  LPHAMLVSVQRVLNGLVIGGIIGVALALASGLSRLGEDLVDASVQMFRTIPWVGMIPLFI 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  +++  NV AG         E  +S  +  W   R+++
Sbjct: 129 IWMGIGEA----PKIALIALGVTFHLYLNVYAGIRGVDAQLIEAGNSLGLGRWGLIRHVV 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  +TG   +   AW A +  E  +         G+G  +  + E      +V+ 
Sbjct: 185 LPGALPGAMTGLRYSLATAWLALVFGETINADD------GIGFLLNRAREFFQTDVIVVC 238

Query: 559 VLIMCCFVLA-------LNRFL--WHPLYL 579
           +++     L        L R L  W P + 
Sbjct: 239 LIVYAALGLLADFIVRTLERLLLQWRPTFT 268



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 104/278 (37%), Gaps = 22/278 (7%)

Query: 1   MFLYNILPPFISRRIFPNIF----DLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPIT 55
           + L  ++P    RR  P         L  +L+  + +       +    P  I       
Sbjct: 4   VLLEPVVPLSARRRSVPRWLRRTTGPLFLLLLWQVCSATGVLPSDMLASPGTIAGTASGM 63

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +   +LP     +  R+L+ +VI  +     A  +  SR    ++   + + ++IP +G 
Sbjct: 64  IQDGTLPHAMLVSVQRVLNGLVIGGIIGVALALASGLSRLGEDLVDASVQMFRTIPWVGM 123

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++            E   I  I     +++  ++Y  +  +   L E   S  L 
Sbjct: 124 IPLFIIWMGIG--------EAPKIALIALGVTFHLYLNVYAGIRGVDAQLIEAGNSLGLG 175

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W    ++ +P ++PG +  +  S++  W  +V       G+T+    GIG  +  A + 
Sbjct: 176 RWGLIRHVVLPGALPGAMTGLRYSLATAWLALV------FGETINADDGIGFLLNRAREF 229

Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
                I+  ++    +  L D +   L R ++ W   F
Sbjct: 230 FQTDVIVVCLIVYAALGLLADFIVRTLERLLLQWRPTF 267


>gi|91216934|ref|ZP_01253897.1| integral membrane components of other binding-protein-dependent
           transport system [Psychroflexus torquis ATCC 700755]
 gi|91184805|gb|EAS71185.1| integral membrane components of other binding-protein-dependent
           transport system [Psychroflexus torquis ATCC 700755]
          Length = 251

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 79/195 (40%), Gaps = 12/195 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV    ++A ++ IP+G+ +     ++S  +P+   +   P     PL +     
Sbjct: 59  YVSTRRVWFSFLLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPLTILFFGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L+  GT +  +  VI      P ++ ++A S + + W  +  + L  + 
Sbjct: 119 DETSK----IVLLFIGTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWDLY-KMKLKVVL 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P     +  + G  W   +++E+ +         G+G  I E+    +  +V +G+L + 
Sbjct: 174 PEIYDNSRISIGICWTYLVIAELVA------AQEGIGHMIKEAQRFSNTADVYIGILTIG 227

Query: 564 CFVLALNRFLWHPLY 578
                 +   +  LY
Sbjct: 228 LVGYLTD-LAFKKLY 241



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 92/205 (44%), Gaps = 16/205 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +T R+  + +++ +       L ++S+ L  +  P +D ++ +P+   +  T+++F    
Sbjct: 61  STRRVWFSFLLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPLTILFFGID- 119

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E + I  +F    +     +  +L NIP++  +++ S   S W   + + +  
Sbjct: 120 -------ETSKIVLLFIGTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWD-LYKMKLKV 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +  N  +S+   W ++V +E++          GIG  I  A +  +   +   +LT
Sbjct: 172 VLPEIYDNSRISIGICWTYLVIAELVA------AQEGIGHMIKEAQRFSNTADVYIGILT 225

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRL 272
           +  V +L D L F+ +     K+++
Sbjct: 226 IGLVGYLTD-LAFKKLYPIFFKYKV 249


>gi|228934176|ref|ZP_04097015.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228825344|gb|EEM71138.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 282

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 18/256 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  +  +  L        P DI       +    L  + S +  R  +   I   
Sbjct: 39  VIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGS 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+   S R    L P + +++++P L      V++F      KV+     A F 
Sbjct: 99  LGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF- 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+ 
Sbjct: 158 -------PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E++          GIG  I  A +  +   +   ++    V    D   +L
Sbjct: 211 VAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRL 264

Query: 259 LFRPMIVWSNKFRLER 274
           L    + W + F+ E 
Sbjct: 265 LEVKFLRWRDGFKGET 280



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L       V  + I         +        +   +    +     +   +  S+  
Sbjct: 29  KVLIRAITIPVIVLIIWQLAGVFDLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFR 88

Query: 402 IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
              G +IG            F       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262


>gi|227871986|ref|ZP_03990372.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
 gi|227842162|gb|EEJ52406.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
          Length = 344

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QD  Y+      ++F +        I+ +  GI  G+   I+  I+PF +LL + P+  +
Sbjct: 138 QDRAYLWECTVSSLFLLFCGYFSGLIVGLFTGIACGYNKKINYWIEPFMKLLGSIPSTTW 197

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+V+   +            ++  G  + I    I G       + E A +        
Sbjct: 198 IPIVMVLATSLFRG----SVFIIALGVWFSITLATITGIRNMDKSYYEAARTLGAKEKDL 253

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +P   P    G + A   A  A +V+E+          +GLG YI        + 
Sbjct: 254 ILEIAIPSALPSIFQGMVQAMSSACMALMVAEMIG------VESGLGWYITWQKSWAEYG 307

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++   ++++C   + +N  L
Sbjct: 308 KMYGAIILICGIFVTVNFLL 327



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 83/215 (38%), Gaps = 17/215 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L +    +   +       L+           ++++   + P + ++ SIP   ++
Sbjct: 139 DRAYLWECTVSSLFLLFCGYFSGLIVGLFTGIACGYNKKINYWIEPFMKLLGSIPSTTWI 198

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V   +L+ G        ++F I     +++T +    + N+ +   E +R+     
Sbjct: 199 PIVMVLATSLFRG--------SVFIIALGVWFSITLATITGIRNMDKSYYEAARTLGAKE 250

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P +   M+ +MS     ++ +EMI V        G+G YI       
Sbjct: 251 KDLILEIAIPSALPSIFQGMVQAMSSACMALMVAEMIGVES------GLGWYITWQKSWA 304

Query: 237 DLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
           +   +  A++ + G+    + LL    + ++ W  
Sbjct: 305 EYGKMYGAIILICGIFVTVNFLLNSIKKRVLRWQE 339


>gi|56965509|ref|YP_177242.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911754|dbj|BAD66281.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 289

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 97/245 (39%), Gaps = 19/245 (7%)

Query: 22  LLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++ F L+  ++ +L   ++         P ++++ V    +   L  +   +T R+L   
Sbjct: 37  VIGFFLLWQVVGMLNVQMEWMNPAFLPTPVNVLEAVLHLHNQGVLFTHIWSSTWRLLLGF 96

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + ++   + A +  K + +  ++ P L+++  IP    L   +++            EL
Sbjct: 97  ALGVVLAVMLAFMIVKFKLVQNIVEPFLNMVGPIPPFALLPIFIIWMGVG--------EL 148

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +  I  +    M       + N+   L   + S   + WQ F  + +P S+P +   M
Sbjct: 149 PKLTLITYATAIPMIAYTVDGIRNVNPLLIRSALSLGANQWQVFKKVILPASLPPIFVGM 208

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++++  +  +V +EMI          G+G  I  +     +  +  A   +  +  ++ 
Sbjct: 209 RVTLAISFSAMVVAEMIG------SYSGLGYLIIDSRNFFQMDNMFLAAALIGVLYSIFA 262

Query: 257 QLLFR 261
            +L +
Sbjct: 263 FILGQ 267



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 66/180 (36%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + +R+++   +  ++ + +   I     + + ++PF  ++   P     P+ +  +    
Sbjct: 88  STWRLLLGFALGVVLAVMLAFMIVKFKLVQNIVEPFLNMVGPIPPFALLPIFIIWMGVGE 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L        L+ + T   ++   + G           A S     W+ ++ +ILP   P 
Sbjct: 148 LPKLT----LITYATAIPMIAYTVDGIRNVNPLLIRSALSLGANQWQVFKKVILPASLPP 203

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       +++A +V+E+          +GLG  I +S        + L   ++   
Sbjct: 204 IFVGMRVTLAISFSAMVVAEMIG------SYSGLGYLIIDSRNFFQMDNMFLAAALIGVL 257


>gi|167034348|ref|YP_001669579.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860836|gb|ABY99243.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 251

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 90/223 (40%), Gaps = 13/223 (5%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
             G         +   +   L    L      + LR  S + I ++       L A S  
Sbjct: 27  AAGAYAFVPLAQVGTALTELLGSGELLVNLWASLLRTCSGLAIGIVGGVGLGALMALSAP 86

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              ++ P+   ++ +P+LG++    ++  N    K++   LAA++         M  + +
Sbjct: 87  ANRLIAPLFHALRQVPMLGWIPLIALWLGNGEGAKLLIVSLAALY--------PMVLNTF 138

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           +SL  +     E ++   LS WQ+ W + +P ++PG+   ++ +++  W   V SE+ + 
Sbjct: 139 ESLRQVTAQHREAAQVLMLSRWQQLWLILLPAALPGIAAGVLQALAFAWVTSVGSELFLS 198

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                   G+GS +  A     +  I+  +L +    +L   L
Sbjct: 199 AGA-----GLGSLMMNAEATARMEIIVVCVLCIGLSGYLMSWL 236



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 12/199 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               ++L  +W    ++ R    + I  +  + +G  +      +  I P    L   P 
Sbjct: 47  LGSGELLVNLW---ASLLRTCSGLAIGIVGGVGLGALMALSAPANRLIAPLFHALRQVPM 103

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + PL+   +            L++     + ++ N            +E A    ++ 
Sbjct: 104 LGWIPLIALWLGNGEG----AKLLIVSLAALYPMVLNTFESLRQVTAQHREAAQVLMLSR 159

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    I+LP   P    G + A   AW  S+ SE+           GLG+ +  +    
Sbjct: 160 WQQLWLILLPAALPGIAAGVLQALAFAWVTSVGSELFLSAG-----AGLGSLMMNAEATA 214

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +V+ VL +      +
Sbjct: 215 RMEIIVVCVLCIGLSGYLM 233


>gi|126733602|ref|ZP_01749349.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. CCS2]
 gi|126716468|gb|EBA13332.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. CCS2]
          Length = 269

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 10/197 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   +      ++ R+ +   I + I I VG+ IG   ++ + + P    +   P   
Sbjct: 67  LWETGLLFKHLAPSLSRLAIGGAIGASIGIAVGVMIGLFSYVRAGLVPLVAAIFPIPKIA 126

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL V        +       L+ FGT    +                +  SF ++ + 
Sbjct: 127 LLPLFVIWFGIDEASK----YALIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWFS 182

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I+LPG  P  ++G   +   A    + +E+           G+GAYI ++      
Sbjct: 183 IVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEYGIGAYILQAGSLYDL 236

Query: 553 PEVVLGVLIMCCFVLAL 569
             +  GV+I+    + L
Sbjct: 237 ERLFAGVVILSLLGVIL 253



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 21/257 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLH----GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           P       F+++I  I I              P D++       +   L ++ + +  R+
Sbjct: 25  PRWVGFAVFIVLIAGIEIATQTGFISSLTLPKPSDVLAAFGELWETGLLFKHLAPSLSRL 84

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                I          +      +   LVP++  +  IP +  L   V++F      K  
Sbjct: 85  AIGGAIGASIGIAVGVMIGLFSYVRAGLVPLVAAIFPIPKIALLPLFVIWFGIDEASKYA 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                    I          + Y ++ N+ R L  + +SF LS +     + +P +MPG+
Sbjct: 145 --------LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWFSIVRKIVLPGAMPGI 196

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S++     +VA+EM+          GIG+YI  A    DL  +   ++ +  + 
Sbjct: 197 LSGLRISLAIAIILLVAAEMLG------AEYGIGAYILQAGSLYDLERLFAGVVILSLLG 250

Query: 253 FLYDQ---LLFRPMIVW 266
            +      L+ + ++ W
Sbjct: 251 VILSTVIGLIEKRLLAW 267


>gi|317047816|ref|YP_004115464.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949433|gb|ADU68908.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 254

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 9/185 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R ++  ++A++I +P+G+ +G    +   ++       + P++   PL +       
Sbjct: 62  TLYRTLMAFVVAAVIGVPLGVMLGSSERLYRSVEFLVDFFRSTPSSALIPLFMLIFGITD 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N       +  F     ILFN   G           A    ++ W  ++ I+L    P 
Sbjct: 122 TNK----IAIAAFAAVLVILFNSAYGVMNARKTRIMAAQVMGVSRWHVFKDIMLMESLPQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI   F
Sbjct: 178 TFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQLFNIKDMYASILITGAF 232

Query: 566 VLALN 570
              LN
Sbjct: 233 GYLLN 237



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 87/231 (37%), Gaps = 16/231 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P + +  +   L   S+ Q    T  R L A V++ +       +   S RL   + 
Sbjct: 36  LPSPGETLGYLFSALADGSMNQDIGDTLYRTLMAFVVAAVIGVPLGVMLGSSERLYRSVE 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++D  +S P    +   ++ F      K+  A  AA+  I         F+    + N 
Sbjct: 96  FLVDFFRSTPSSALIPLFMLIFGITDTNKIAIAAFAAVLVI--------LFNSAYGVMNA 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +     ++   +S W  F  + +  S+P     +   +S     V+ +EM +  +T   
Sbjct: 148 RKTRIMAAQVMGVSRWHVFKDIMLMESLPQTFVGLRTGVSMALVIVIVAEMFIGSET--- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             G+G  I  A +  ++  +  ++L      +L +    L+ +  + WS K
Sbjct: 205 --GLGHRIIDAQQLFNIKDMYASILITGAFGYLLNLGFLLIEKRCVHWSGK 253


>gi|218781573|ref|YP_002432891.1| nitrare/sulfonate/bicarbonate ABC transporter permease
           [Desulfatibacillum alkenivorans AK-01]
 gi|218762957|gb|ACL05423.1| binding-protein-dependent transport systems inner membrane
           component [Desulfatibacillum alkenivorans AK-01]
          Length = 266

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  RV+    +A++  IP+G+  G    +   +      L A P   + PL +      
Sbjct: 73  VSCGRVLAGFSLAALFGIPLGVLSGRVDAMQKILSSSINALRAVPGICWLPLAMVWFGIG 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +         L+     + I  N   GA        +  +   +        I+LPG  P
Sbjct: 133 YKT----TLFLVALAAFFPIYINTAVGARQVSPLLFQAGAMMGVRRMNAVFSILLPGAMP 188

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G     G +W   ++ E+           GLGA I ++   G    +++G++++  
Sbjct: 189 SILAGLRLGLGISWAYLVLGEL------TGVPNGLGAVIMDARMLGRIDIIIVGIVLIAL 242

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 243 LGRTSDLLL 251



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 77/192 (40%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L+   ++ LF      L+ +   +  +L   ++ ++++P + +L   +V+F   Y
Sbjct: 74  SCGRVLAGFSLAALFGIPLGVLSGRVDAMQKILSSSINALRAVPGICWLPLAMVWFGIGY 133

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      +F +  +  + +  +       +   L +      +      + + +P 
Sbjct: 134 --------KTTLFLVALAAFFPIYINTAVGARQVSPLLFQAGAMMGVRRMNAVFSILLPG 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP ++  + + +   W ++V  E+  V +      G+G+ I  A     +  I+  ++ 
Sbjct: 186 AMPSILAGLRLGLGISWAYLVLGELTGVPN------GLGAVIMDARMLGRIDIIIVGIVL 239

Query: 248 MLGVIFLYDQLL 259
           +  +    D LL
Sbjct: 240 IALLGRTSDLLL 251


>gi|331270536|ref|YP_004397028.1| putative glycine betaine/carnitine/choline ABC transporter
           [Clostridium botulinum BKT015925]
 gi|329127086|gb|AEB77031.1| probable glycine betaine/carnitine/choline ABC transporter
           [Clostridium botulinum BKT015925]
          Length = 528

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                   L+++++++L       L +++++L   ++ + +I+Q++P L  L F +    
Sbjct: 19  LLEHIGLTLASVIVAILIGVPLGILISRNKKLSGPIIGVANIIQAVPSLALLGFLIPILG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+F +F   +  +  + Y  L +I  D+ E +    L+  QK   + 
Sbjct: 79  IG--------STPAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAADGMGLTSAQKLKMIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + ++       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMAGIRIA------AVTAVGLMTIAAF-IGAGGLGYMVFTGVQRVNNYMILAG 183

Query: 245 MLTMLGVIFLYDQL 258
            +    +    D +
Sbjct: 184 AIPSGILALFIDFI 197



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +I+A +I +P+GI I     +S  I   A ++ A P+      ++  +       + 
Sbjct: 27  LASVIVAILIGVPLGILISRNKKLSGPIIGVANIIQAVPSLALLGFLIPILGIG----ST 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++   +   I+ N   G S+   D  E A    +T  +  + I LP   P  + G 
Sbjct: 83  PAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAADGMGLTSAQKLKMIQLPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    ++ +   ++ G +      L ++
Sbjct: 143 RIAAVTAVGLMTIAAFIGAG-------GLGYMVFTGVQRVNNYMILAGAIPSGILALFID 195


>gi|149915311|ref|ZP_01903838.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
 gi|149810600|gb|EDM70441.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
          Length = 278

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + +   +LSA V  +          A    L   L P+LD+MQ++P   +L   +V
Sbjct: 90  WEEMTESLTLVLSACVFCMAIGVPIGIATAHRPGLYRGLRPVLDLMQTLPPFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF +            +  + + P+ L E +++F  +  Q  W
Sbjct: 150 FFG---IGMVPGLIATVIFVVPAP-----IRLTHLGISSTPKPLLEAAQAFGATPRQTLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++          G+G  +  AI   ++   
Sbjct: 202 KVELPYALPQIMAGLNQTIMLSLSMVVIAALV-------GADGLGVPVLRAINSVNIALG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             + L ++ V  + D++L
Sbjct: 255 FESGLMIVVVAIILDRML 272



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 22/280 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVVC 353
           +G ++  FF  L +N       L V      + FL +        ++ +F    W     
Sbjct: 11  VGDAAEIFFLWLQDNAALFFDALSVAMEGLIDAFLWVLQTPHPLILIGVFVGLTWLFQRN 70

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                       +++N   ++++         ++  V+   +    I +P+GI    RP 
Sbjct: 71  WKTCLFVALGFLFVLNQDYWEEMTE-------SLTLVLSACVFCMAIGVPIGIATAHRPG 123

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   ++P   L+   P  V+    +       +   +   + ++      I      G S
Sbjct: 124 LYRGLRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLIATVIFVVPA---PIRL-THLGIS 179

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    E A +F  T  +    + LP   P  + G       + +  +++ +       
Sbjct: 180 STPKPLLEAAQAFGATPRQTLWKVELPYALPQIMAGLNQTIMLSLSMVVIAALVG----- 234

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               GLG  +  +    +        L++    + L+R L
Sbjct: 235 --ADGLGVPVLRAINSVNIALGFESGLMIVVVAIILDRML 272


>gi|302388561|ref|YP_003824383.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302199189|gb|ADL06760.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 245

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV   + IA II IP GI +   P  +  + P        P     P+
Sbjct: 47  GKLLLHIGASLGRVGAGLSIALIIGIPAGIIMASSPMANRLLHPLVYFSYPVPKTALLPV 106

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +   + +      L+++  T + I+  V   A     D   +A S         + 
Sbjct: 107 SMLLLGLGNGSK----ILIIVLTTVFQIIVAVRDSAEHIDEDIYYMARSAGAHKKNILKD 162

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LP + P   T      G +    ++ E       +    GLG YI ++  + ++ ++ 
Sbjct: 163 ITLPAVLPELFTSIRIGMGTSLAILLIVEA------YGTRWGLGYYILDAWSRINYIQMY 216

Query: 557 LGVLIMCCFVLAL 569
            G+++M     AL
Sbjct: 217 GGIVVMSVVGAAL 229



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 14/197 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R+ + + I+L+       + A S     +L P++     +P    L  
Sbjct: 47  GKLLLHIGASLGRVGAGLSIALIIGIPAGIIMASSPMANRLLHPLVYFSYPVPKTALLPV 106

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           +++        K        I  I  + V+ +  ++  S  +I  D+  ++RS       
Sbjct: 107 SMLLLGLGNGSK--------ILIIVLTTVFQIIVAVRDSAEHIDEDIYYMARSAGAHKKN 158

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P  +P L  ++ + M      ++  E            G+G YI  A    + 
Sbjct: 159 ILKDITLPAVLPELFTSIRIGMGTSLAILLIVEAYG------TRWGLGYYILDAWSRINY 212

Query: 239 LAILYAMLTMLGVIFLY 255
           + +   ++ M  V    
Sbjct: 213 IQMYGGIVVMSVVGAAL 229


>gi|254452526|ref|ZP_05065963.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198266932|gb|EDY91202.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 277

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 95/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +VI     L   +Q +  P  ++ I  + +      +  + +   +LSA V+ +     
Sbjct: 54  FIVIAAFVALTWAMQRSWKPCLMIAIGFLFILNQDYWEETTESLTLVLSACVVCMGIGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 IGIAAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + + P  L E + +F  +  QK   + +P ++P ++  +  ++     
Sbjct: 171 -----IRLTHLGISSTPLPLLEAADAFGATKRQKLLKVELPSALPQIMAGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   D      + L ++ V  + D++L
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALGTVDTAKGFESGLVIVVVAIMLDRML 272



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 99/279 (35%), Gaps = 25/279 (8%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
             ++   S  FF  +++ ++ L   +  +    P  F+ + +   +++ +   W   +  
Sbjct: 19  FDWLEPRSRAFFDGMADTMESLIDGILWL-LQTPHPFIVIAAFVALTWAMQRSWKPCLMI 77

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
               +      +I+N   +++          ++  V+   ++   I +P+GI    RP +
Sbjct: 78  AIGFL------FILNQDYWEE-------TTESLTLVLSACVVCMGIGVPIGIAAAHRPRL 124

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + ++P   L+   P  V+    +       +   +   + ++      I      G S+
Sbjct: 125 YAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIRL-THLGISS 180

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P    E A +F  T  +    + LP   P  + G       + +  +++ +        
Sbjct: 181 TPLPLLEAADAFGATKRQKLLKVELPSALPQIMAGLNQTIMLSLSMVVIAALVG------ 234

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              GLG  +  +       +     L++    + L+R L
Sbjct: 235 -ADGLGVPVVRALGTVDTAKGFESGLVIVVVAIMLDRML 272


>gi|325264226|ref|ZP_08130958.1| taurine transport system permease protein TauC [Clostridium sp. D5]
 gi|324030710|gb|EGB91993.1| taurine transport system permease protein TauC [Clostridium sp. D5]
          Length = 257

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++   +   +I  I+ IP+G+ + +        +P   L+   P   + PL++     
Sbjct: 65  LASLQVALSGYVIGLIVGIPLGVCMAWYKRFDWFARPLFDLVRPVPGIAWIPLMIILFGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+     S+++   +    + N  +G     +    V  ++  +  +    I LP   
Sbjct: 125 GLLSK----SMVIFISSFTACVINSYSGIKQTESVHLWVGQTYGASNSQMLFKIALPTAL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A   +W A + +E+ +       T GLG  I +S        ++ G+ ++ 
Sbjct: 181 PMIMTGMKGALATSWGALVAAELLA------STRGLGFMIQQSRGLMRVDIIIAGMAMIG 234

Query: 564 CFVLAL 569
                L
Sbjct: 235 LVGAVL 240



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 18/246 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----HSLPQYASRTTLRML 73
           +I  +  F++V  I   + +     T    +        D      ++ Q+   +    L
Sbjct: 13  SIISVAVFLIVWQIFATVNNTGMLPTPVSVVKAFFTKFSDPNPDGSTMWQHLLASLQVAL 72

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  VI L+         A  +R      P+ D+++ +P + ++   ++ F          
Sbjct: 73  SGYVIGLIVGIPLGVCMAWYKRFDWFARPLFDLVRPVPGIAWIPLMIILFGIGL------ 126

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L+    IF S       + Y  +         V +++  S  Q  + + +P ++P ++
Sbjct: 127 --LSKSMVIFISSFTACVINSYSGIKQTESVHLWVGQTYGASNSQMLFKIALPTALPMIM 184

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M  +++  W  +VA+E++          G+G  I  +     +  I+  M  +  V  
Sbjct: 185 TGMKGALATSWGALVAAELLA------STRGLGFMIQQSRGLMRVDIIIAGMAMIGLVGA 238

Query: 254 LYDQLL 259
           +   +L
Sbjct: 239 VLAGIL 244


>gi|148974204|ref|ZP_01811737.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3]
 gi|145965901|gb|EDK31149.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3]
          Length = 285

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 95  WQEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 154

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +   
Sbjct: 155 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGVTKVPEELIEAGKAFGASRMKLLL 206

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV +       T++   G+G  +  A+   ++   
Sbjct: 207 KVELPAALPSIMAGVTQCIMLSLSMVVIA-------TLVGADGLGKPVVRALNTVNISQG 259

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 260 FEAGLAIVLVAIILDRL 276



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 18/277 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           +++           +     +   L  +     + F  +     +     I W+      
Sbjct: 18  QWMEAGVDWLTINAAGFFDAISIFLETVILFLVDVFKWMPPALPIVITAAIAWYLHRKLS 77

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +     ++  I+N   +Q++L    L       V     I+ +I +PVGI    RP + 
Sbjct: 78  LVIFVVAALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPVGIMAAHRPWLY 130

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + ++P   L+   P  V+    +  +  + L     L   +IF     I      G +  
Sbjct: 131 TLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGVTKV 186

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P +  E   +F  +  +    + LP   P  + G       + +  +++ +         
Sbjct: 187 PEELIEAGKAFGASRMKLLLKVELPAALPSIMAGVTQCIMLSLSMVVIATLVG------- 239

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             GLG  +  +    +  +     L +    + L+R 
Sbjct: 240 ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 276


>gi|325924365|ref|ZP_08185905.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas gardneri ATCC 19865]
 gi|325545152|gb|EGD16466.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas gardneri ATCC 19865]
          Length = 490

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L ++       +  ++  +L+       L
Sbjct: 258 QVKLERQSEAAVAAQWLGVTPASEADSLIKRLLRHTREHLALVGISLGFALVIALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + +++  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAQAIWLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q  F  +  W
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQAAFEGLERW 478



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 4/176 (2%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +A Q +G          +  ++      +  V + +  A +I +P+G+    RP +  
Sbjct: 267 AAVAAQWLGVTPASEADSLIKRLLRHTREHLALVGISLGFALVIALPLGVLAARRPRLGQ 326

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +     +L   P+   F  ++                 +   +   I+ N  AG ++ P
Sbjct: 327 VVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTHAGLTSIP 382

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            + ++ A +  +  W     + LP      V G  TA       + +  +   G  
Sbjct: 383 RELRQTAQAIWLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGAGGY 438


>gi|170743235|ref|YP_001771890.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168197509|gb|ACA19456.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 272

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 81/264 (30%), Gaps = 18/264 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                R   P   L   + +   ++L +    V    A  +   S  ++        V +
Sbjct: 5   APAPARGGLPAGVLAPAAARLTPWLLPVL-ILVGWQAASSLGLVSTRFMPAPLDVAAVGW 63

Query: 379 VIWLGC-------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            +           ++  R     ++   I   +G+  G             Q++   P  
Sbjct: 64  RLGRTGELWTNLWVSFLRAAAGFLVGGGIGFALGLANGLSRAADRLTDTTVQMIRNVPHL 123

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PLV+                L+  G  + I  N + G  A      E+   + ++  
Sbjct: 124 SLIPLVILWFGIG----EEAKLFLVALGVFFPIYANTLHGIRAVDPQLIEMGRVYGLSPA 179

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +  ++LPG  P    G   A G  W   IV+E  S       ++GLG    ++ E   
Sbjct: 180 SLFLRVVLPGALPSIFVGLRYALGIMWLTLIVAETIS------ASSGLGYMAMQAREFML 233

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
              VVL +LI        +     
Sbjct: 234 VDVVVLAILIYALLGKVADVLTRR 257



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 96/266 (36%), Gaps = 17/266 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
              + R+ P +  +L  V      ++ L   +    P D+  +         L      +
Sbjct: 19  APAAARLTPWLLPVLILVGWQAASSLGLVSTRFMPAPLDVAAVGWRLGRTGELWTNLWVS 78

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR  +  ++     F        SR    +    + +++++P L  +   +++F     
Sbjct: 79  FLRAAAGFLVGGGIGFALGLANGLSRAADRLTDTTVQMIRNVPHLSLIPLVILWFGIG-- 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E A +F +     + +  +    +  +   L E+ R + LS    F  + +P +
Sbjct: 137 ------EEAKLFLVALGVFFPIYANTLHGIRAVDPQLIEMGRVYGLSPASLFLRVVLPGA 190

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   +  ++   W  ++ +E I          G+G     A +   +  ++ A+L  
Sbjct: 191 LPSIFVGLRYALGIMWLTLIVAETISASS------GLGYMAMQAREFMLVDVVVLAILIY 244

Query: 249 LGVIFLYDQL---LFRPMIVWSNKFR 271
             +  + D L   L R  + W+  +R
Sbjct: 245 ALLGKVADVLTRRLERLCLSWNPAYR 270


>gi|15887513|ref|NP_353194.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15155040|gb|AAK85979.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 257

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 10/169 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++RVV   ++AS+I +PVGI +G    I + ++PF       PA+ F PL++     
Sbjct: 65  GMTIWRVVGGFVLASLIAVPVGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWAGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +       L++  G  + I+  V    +    D  E A +         R +++P   
Sbjct: 125 GEMQK----LLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           P          G AW   IV+E+         ++G+G  I  S    + 
Sbjct: 181 PDIAEILRLVLGWAWTYVIVAELIG------ASSGIGYMIINSQALMAT 223



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 15/233 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSL 61
           +  + P   S RI   I   + F    G   +           P  ++      L     
Sbjct: 1   MQPLQPIKNSTRIILGILFFVLFFSAWGFATLGGFVSPTFLADPITMLKDGIYLLTDQGF 60

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T  R++   V++ L            + +  +L P +   + +P   F+   ++
Sbjct: 61  AGDIGMTIWRVVGGFVLASLIAVPVGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLIL 120

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +            E+  +  IF   V+ +   +  ++    RDL E + +          
Sbjct: 121 WAGIG--------EMQKLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVR 172

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            + +P + P +   + + +   W +V+ +E+I          GIG  I  +  
Sbjct: 173 RVLIPANAPDIAEILRLVLGWAWTYVIVAELIGASS------GIGYMIINSQA 219


>gi|84386103|ref|ZP_00989132.1| putative permease of ABC transporter [Vibrio splendidus 12B01]
 gi|84378873|gb|EAP95727.1| putative permease of ABC transporter [Vibrio splendidus 12B01]
          Length = 266

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 17/237 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLRMLSAMVISLL 81
                + I+            P  ++ +V   L + +L  +     T + + +A  IS+L
Sbjct: 36  WMPPALPIVMTAAIAWYLHRKPSLVIFVVAALLTILNLGYWQEMLETFVLVFAATTISVL 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +AA    L  VL PILD+MQ++P   +L  T+V F     G V G     IFA
Sbjct: 96  IGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFA 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I            Y  +  +P +L E  ++F  S  +    + +P ++P ++  +   + 
Sbjct: 153 IAAP-----IRLTYLGVTKVPEELIEAGKAFGASRMKLLMKVELPAALPSIMAGVTQCIM 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + ++          G+G  +  A+   ++     A L ++ V  + D+L
Sbjct: 208 LSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 257



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 88/248 (35%), Gaps = 24/248 (9%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F +    L +     +++ L      V+  VA  +   ++GY      +Q++L    L  
Sbjct: 34  FKWMPPALPIVMTAAIAWYLHRKPSLVIFVVAALLTILNLGY------WQEMLETFVL-- 85

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
                V     I+ +I +PVGI    RP + + ++P   L+   P  V+    +  +  +
Sbjct: 86  -----VFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYL---IPTLVLF 137

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L     L   +IF     I      G +  P +  E   +F  +  +    + LP   P
Sbjct: 138 GLGIVPGLISTIIFAIAAPIRL-TYLGVTKVPEELIEAGKAFGASRMKLLMKVELPAALP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       + +  +++ +           GLG  +  +    +  +     L +  
Sbjct: 197 SIMAGVTQCIMLSLSMVVIAALVG-------ADGLGKPVVRALNTVNISQGFEAGLAIVL 249

Query: 565 FVLALNRF 572
             + L+R 
Sbjct: 250 VAIILDRL 257


>gi|227523463|ref|ZP_03953512.1| binding-protein-dependent transport system inner membrane component
           [Lactobacillus hilgardii ATCC 8290]
 gi|227089390|gb|EEI24702.1| binding-protein-dependent transport system inner membrane component
           [Lactobacillus hilgardii ATCC 8290]
          Length = 251

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   ++  II ++I + +G+++G     +    PF +++   PA  + PL +      +
Sbjct: 59  SLGLWLISFIIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSY 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +        L+ F   + + F  I G  +   D+ E A +   + ++  R +++PG  P 
Sbjct: 119 MAE----IFLIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPN 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  TA G ++   ++SE+           GLG YI  +   G++ +V   ++IM   
Sbjct: 175 IFIGIFTAMGLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVL 228



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 15/218 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  D   L +    +    L + +I  L   V      + R+      P L ++  IP  
Sbjct: 45  IKTDQKLLIESTWSSLGLWLISFIIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAA 104

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++  T+V F          + +A IF I  +  + + F     + +I  D  E +++  
Sbjct: 105 AWMPLTMVIF--------PTSYMAEIFLIAFAVWFPVAFMTIGGVQSISTDYFESAKTLG 156

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S +Q    + +P ++P +   +  +M   +  +V SEMI          G+G YI  A 
Sbjct: 157 FSEFQILRKVVIPGALPNIFIGIFTAMGLSFTMLVISEMIGAKV------GLGWYINWAK 210

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              +   +  A++ M  V+F         +  ++ ++R
Sbjct: 211 GVGNYTQVYAAIVIM-AVLFSVIFSFLNKLQEYALRWR 247


>gi|300715134|ref|YP_003739937.1| ABC transporter [Erwinia billingiae Eb661]
 gi|299060970|emb|CAX58077.1| ABC transporter protein, membrane protein [Erwinia billingiae
           Eb661]
          Length = 254

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 9/187 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T++R ++   ++++I +P+G+ +G    +   ++       + P++   PL +     
Sbjct: 60  GATLYRTLMAFFVSAVIGVPLGVMLGSSERLYRSVEFLVDFFRSTPSSALIPLFMLIFGI 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N       +  F     ILFN   G           A    ++ W  ++ I+L    
Sbjct: 120 TDTNK----IAIAAFAAVLVILFNSAYGVMNAKKTRIMAAQVMGVSRWHVFKDIMLMESL 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI  
Sbjct: 176 PQTFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQLFNIKDMYASILITG 230

Query: 564 CFVLALN 570
            F   LN
Sbjct: 231 AFGYLLN 237



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 16/231 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P + V  +   L   S+ Q    T  R L A  +S +       +   S RL   + 
Sbjct: 36  LPSPGETVSYLFSKLADGSMNQDIGATLYRTLMAFFVSAVIGVPLGVMLGSSERLYRSVE 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++D  +S P    +   ++ F      K+  A  AA+  I         F+    + N 
Sbjct: 96  FLVDFFRSTPSSALIPLFMLIFGITDTNKIAIAAFAAVLVI--------LFNSAYGVMNA 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +     ++   +S W  F  + +  S+P     +   +S     V+ +EM +  +T   
Sbjct: 148 KKTRIMAAQVMGVSRWHVFKDIMLMESLPQTFVGLRTGVSMALVIVIVAEMFIGSET--- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             G+G  I  A +  ++  +  ++L      +L +    L+ +  + WS K
Sbjct: 205 --GLGHRIIDAQQLFNIKDMYASILITGAFGYLLNLGFLLIEKRCVHWSGK 253


>gi|121997043|ref|YP_001001830.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
 gi|121588448|gb|ABM61028.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
          Length = 376

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P  + L   ++ +    +         +   ++  +        L     RT   ++++ 
Sbjct: 121 PPPWVLAILLIAVSFWRVGWRFGIFAIIALALIFSME-------LWPETIRTLSLVVASS 173

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + +L+         +++ R+ MV+ PILD+MQ++P   +L    ++F     G V GA  
Sbjct: 174 IAALIIGLPIGIAMSRNDRVEMVVRPILDLMQTMPPFVYLIPAAIFFGL---GTVPGAIA 230

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             IFA+  +            +  + ++  E  ++F  +  Q  + + +P + P ++  +
Sbjct: 231 TLIFAMPPA-----VRLTNLGIRQVSQEHVEAGQAFGCTPRQLLFKIQLPLATPSIMAGI 285

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++      VV + MI  G     +          I+   +       L ++ +  L D
Sbjct: 286 NQTIMLALSMVVIASMIGAGGLGGTV-------LTGIQRLQVGLGFEGGLAVVFLAILLD 338

Query: 257 QL 258
           ++
Sbjct: 339 RI 340



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 56/183 (30%), Gaps = 4/183 (2%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +    ++      + W+   + +        + +      T+  VV   I A II +P+G
Sbjct: 125 VLAILLIAVSFWRVGWRFGIFAIIALALIFSMELWPETIRTLSLVVASSIAALIIGLPIG 184

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +     +   ++P   L+   P  V+            +   +   +  +        
Sbjct: 185 IAMSRNDRVEMVVRPILDLMQTMPPFVYLIPAAIFFGLGTVPGAIATLIFAMPPAVRL-- 242

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G      +  E   +F  T  +    I LP   P  + G       A +  +++ 
Sbjct: 243 --TNLGIRQVSQEHVEAGQAFGCTPRQLLFKIQLPLATPSIMAGINQTIMLALSMVVIAS 300

Query: 526 VAS 528
           +  
Sbjct: 301 MIG 303


>gi|297538477|ref|YP_003674246.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
 gi|297257824|gb|ADI29669.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
          Length = 281

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 89/239 (37%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79
            L A    +  I  +  G         +     + L D          T   ++SA +IS
Sbjct: 43  GLQAIPFWLFAILFIAIGYWRLGWKFGLFCAASLWLIDNMGFTAQTLVTLALIISATLIS 102

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L         A ++ +    + P+LD MQ++P   +L    ++F     G+V G     I
Sbjct: 103 LTVGIPLGIWAGRNDKAEATIRPVLDFMQTMPAFVYLIPAAMFFGL---GRVPGVIATVI 159

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           FA+       +       +  + ++  E   +F  +  Q    + +P +M  L   +  +
Sbjct: 160 FAMP-----PVVRLTSLGIRQVNKEQVEAGIAFGCTPTQLLMKVQIPSAMAALFAGINQT 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      V+ + M+  G       G+G+ +  +I   D+     + L ++ +  + D++
Sbjct: 215 IMMALSMVIIASMVGAG-------GLGNDVLSSISRLDIGLGFESGLGVVLLAIMLDRI 266



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           FW   +  +AIG   + W+   +        D +       +T+  ++   +I+  + IP
Sbjct: 49  FWLFAILFIAIGYWRLGWKFGLFCAASLWLIDNMGFTAQTLVTLALIISATLISLTVGIP 108

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW G      + I+P    +   PA V+            +   +   +         
Sbjct: 109 LGIWAGRNDKAEATIRPVLDFMQTMPAFVYLIPAAMFFGLGRVPGVIATVIF----AMPP 164

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G      +  E   +F  T  +    + +P        G       A +  I+
Sbjct: 165 VVRLTSLGIRQVNKEQVEAGIAFGCTPTQLLMKVQIPSAMAALFAGINQTIMMALSMVII 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +  S  +          L +    + L+R 
Sbjct: 225 ASMVGAG-------GLGNDVLSSISRLDIGLGFESGLGVVLLAIMLDRI 266


>gi|262370958|ref|ZP_06064281.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           johnsonii SH046]
 gi|262314034|gb|EEY95078.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           johnsonii SH046]
          Length = 271

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q++   PA    PLV+                L+  G  + I  N  
Sbjct: 102 SSKTASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIYINTY 157

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S 
Sbjct: 158 HGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS- 216

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   G+G     + E      V++G+L+        +  
Sbjct: 217 -----AQAGIGYMTMNAREFLQTDIVLVGILLYALLGKLADVL 254



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 99/253 (39%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++  + +   L   +    P  +V      L    L ++   +  R L  +++   
Sbjct: 32  IGLIVLWQMASSTGLLESRILPAPTAVVTAFWNLLLSGELWKHVQVSAGRALLGLLVGGG 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   S+    +L   L ++++IP L  +   +++F           E A +F 
Sbjct: 92  LGLFLGLLNGSSKTASTLLDTTLQMIRNIPALALIPLVILWFGID--------ETAKLFL 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++   L E+ +S+ L+ WQ +  + +P +MP ++  +  S+ 
Sbjct: 144 VAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLG 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      +L  +L    +  L D L   
Sbjct: 204 LVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDIVLVGILLYALLGKLADVLAVT 257

Query: 259 LFRPMIVWSNKFR 271
           L + ++ W   ++
Sbjct: 258 LEKYLLRWHAGYQ 270


>gi|218711074|ref|YP_002418694.1| putative Aliphatic sulfonates transport system permease protein
           [Escherichia coli ED1a]
 gi|218349857|emb|CAQ87258.1| putative Aliphatic sulfonates transport system permease protein
           [Escherichia coli ED1a]
          Length = 252

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 81/226 (35%), Gaps = 10/226 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              +  ++  +    I    +      +  +      ++ RV     ++  +   +   +
Sbjct: 21  LSSLELISAYLLPSPITVFYSAVNMWQIGALPRHISTSLLRVFEGFCLSCCLGTMLAGLV 80

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   +     L    P     PL++  +             +++  + + I  N 
Sbjct: 81  ARYSWLEQLLSAPLALFRMIPPLAMTPLLILWLGIGETTQLS----IIVLASVFPIFLNT 136

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G        KE+A S +++  R+   I++P   P  VTG   A G +W A I +E+ +
Sbjct: 137 RDGLRRVSTAHKELAISLNLSPLRYLLAIVIPSATPSVVTGFRLAFGYSWRALIGAELIA 196

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                  ++GLG  I +S E      V++G+L +      L+   +
Sbjct: 197 ------ASSGLGYLIIDSQEMMRTDAVIVGILTIGLIGWLLDTLFY 236



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 14/229 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           + ++ L        P  +         + +LP++ S + LR+     +S     + A L 
Sbjct: 21  LSSLELISAYLLPSPITVFYSAVNMWQIGALPRHISTSLLRVFEGFCLSCCLGTMLAGLV 80

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+   L  +L   L + + IP L      +++       ++    LA++F IF       
Sbjct: 81  ARYSWLEQLLSAPLALFRMIPPLAMTPLLILWLGIGETTQLSIIVLASVFPIF------- 133

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L  +    +E++ S  LS  +    + +P + P +V    ++    W  ++ +
Sbjct: 134 -LNTRDGLRRVSTAHKELAISLNLSPLRYLLAIVIPSATPSVVTGFRLAFGYSWRALIGA 192

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           E+I          G+G  I  + +     A++  +LT+  + +L D L 
Sbjct: 193 ELIAASS------GLGYLIIDSQEMMRTDAVIVGILTIGLIGWLLDTLF 235


>gi|85704303|ref|ZP_01035406.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. 217]
 gi|85671623|gb|EAQ26481.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. 217]
          Length = 278

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 98/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++IG+   L   +Q +      V +  + +      +  + +   ++S+ +  +     
Sbjct: 54  LVIIGVFVALTWALQRSWKTCLFVILGFLFILNQGYWEETTESLTLVISSCIFCMALGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 LGIAAAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFG---IGMVPGLIATVIFVVPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + N P+ L E +++F  +  Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTHLGISNTPQPLLEAAQAFGATNSQTLWKVELPYALPQIMAGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV          ++   G+G  +  AI   ++     + L ++ V  + D++L
Sbjct: 226 MVVI-------GALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 14/276 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G  +  FF  L +N       L  +     + FL +    +  + L I    V    A+
Sbjct: 11  VGKWAEGFFLWLQDNAAGFFDALAALMEGLIDAFLWVL---QTPHPLVIIGVFVALTWAL 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +W++  +++  F +            ++  V+   I    + +P+GI    RP +   
Sbjct: 68  QRSWKTCLFVILGFLFILNQGYWEETTESLTLVISSCIFCMALGVPLGIAAAHRPRLYDG 127

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   L+   P  V+    +       +   +   + ++      I      G S  P 
Sbjct: 128 MRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLIATVIFVVPA---PIRL-THLGISNTPQ 183

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A +F  T  +    + LP   P  + G       + +  ++  +           
Sbjct: 184 PLLEAAQAFGATNSQTLWKVELPYALPQIMAGLNQTIMLSLSMVVIGALVG-------AD 236

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  +  +    +        L++    + L+R L
Sbjct: 237 GLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272


>gi|330812461|ref|YP_004356923.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380569|gb|AEA71919.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 260

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 17/238 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVV 392
           ++          V  +++   W S   +       +    +           I+ +R  V
Sbjct: 8   LAPWAVPLLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVNLVRSGEIWTHLAISGWRAAV 67

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +I   I + +G   G        +    Q+L   P     PLV+              
Sbjct: 68  GFLIGGGIGLALGFITGLSKWGERLLDSSVQMLRNIPHLALIPLVILWFGI----DESAK 123

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+  GT + I  N   G         E++ S+ ++G R +R +ILPG  P  + G   
Sbjct: 124 IFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGLRLFRQVILPGALPSILVGVRF 183

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A G  W   IV+E  S       ++G+G     + E      VVL +L+        +
Sbjct: 184 ALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 235



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 99/264 (37%), Gaps = 18/264 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
                   L  + V  +         +    P  +++     +    +  + + +  R  
Sbjct: 7   TLAPWAVPLLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVNLVRSGEIWTHLAISGWRAA 66

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +I          +   S+    +L   + ++++IP L  +   +++F          
Sbjct: 67  VGFLIGGGIGLALGFITGLSKWGERLLDSSVQMLRNIPHLALIPLVILWFGID------- 119

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A IF +    ++ +  + Y  + N+   L E+SRS+ LSG + F  + +P ++P ++
Sbjct: 120 -ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGLRLFRQVILPGALPSIL 178

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          GIG     A +      ++ A+L    +  
Sbjct: 179 VGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYAVLGK 232

Query: 254 LYD---QLLFRPMIVWSNKFRLER 274
           L D   + L R  + W   +++ +
Sbjct: 233 LADLAARGLERVWLRWHPAYQVNK 256


>gi|260428433|ref|ZP_05782412.1| glycine betaine/proline ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260422925|gb|EEX16176.1| glycine betaine/proline ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 344

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +     I +L         ++S RL  VL P+LD++Q++P   +L   +  F 
Sbjct: 150 AMQTLAIIFVCAFICVLLGVPIGIAMSRSDRLQSVLTPVLDMLQTLPPFVYLIPLIFLFS 209

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P            A+    +  +       +  +  D+ E + +F ++  QK + + 
Sbjct: 210 VTEPKLYG-------IAVILYAIVPVVRLTNLGIRLVNPDVIEAADAFGMTKSQKLFGVQ 262

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + M+         PG+G  +   I+  +L   L A
Sbjct: 263 IPLALPNIMAGVNQTIMMSLAMVVIASMVS-------APGLGILVLRGIRNLELGVGLIA 315

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +    D++
Sbjct: 316 GLGIVVLAIALDRV 329



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 80/231 (34%), Gaps = 10/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    +    +V    +G +W+ +G++         +    +   T+  + V   I  ++
Sbjct: 108 TPWWAMVPILLVITWVVGRSWKVVGFVALVLAGLAFVDHYEVAMQTLAIIFVCAFICVLL 167

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     + S + P   +L   P  V+    +  +  + +       + +I   
Sbjct: 168 GVPIGIAMSRSDRLQSVLTPVLDMLQTLPPFVYL---IPLIFLFSVTEPKLYGIAVILYA 224

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      D  E A +F +T  +    + +P   P  + G       +   
Sbjct: 225 IVPVVRLTNLGIRLVNPDVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLAM 284

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ + S         GLG  +            ++  L +    +AL+R
Sbjct: 285 VVIASMVS-------APGLGILVLRGIRNLELGVGLIAGLGIVVLAIALDR 328


>gi|297204708|ref|ZP_06922105.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197710781|gb|EDY54815.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 297

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 84/276 (30%), Gaps = 19/276 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             +   R   +        +        V  ++          V+   A      + +  
Sbjct: 29  LPRDARRRTPLSTLRERLRWPLGVYTTPVVVLVAWEILARAGVVSKTYAPAPTSIVKSAA 88

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +     I++ R  + + I   + I  G+  G             Q+L   P  
Sbjct: 89  DLWQQGVLGPDLAISLQRAGIGLAIGLTVGILTGVLGGLLRSGEYLFNGLVQVLNTIPLL 148

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++           L   LL+ FG    +  N+ A          E+A +     W
Sbjct: 149 AVLPLMIVWFGI----DELTKVLLISFGAGVPMYLNLFAAIRGVDQRLIEMARTTGAGTW 204

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R    +++PG  P ++ G   +   +    + +E  +         GLG  I +      
Sbjct: 205 RLVTRVLVPGALPGFLVGLRFSLAYSVLGLVAAETVNADK------GLGFLITQGQTYLQ 258

Query: 552 FPEVVLGVLIMCCFVLALNRFL---------WHPLY 578
             +V +G++I     L  ++F+         W P Y
Sbjct: 259 TNQVFVGLVIYSLLGLLADQFVRVLERVLLRWRPSY 294



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV           L    + +  R    + I L    +   L    R    +  
Sbjct: 77  APAPTSIVKSAADLWQQGVLGPDLAISLQRAGIGLAIGLTVGILTGVLGGLLRSGEYLFN 136

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ ++ +IP+L  L   +V+F           EL  +  I       M  +++ ++  +
Sbjct: 137 GLVQVLNTIPLLAVLPLMIVWFGID--------ELTKVLLISFGAGVPMYLNLFAAIRGV 188

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L E++R+     W+    + VP ++PG +  +  S++     +VA+E +        
Sbjct: 189 DQRLIEMARTTGAGTWRLVTRVLVPGALPGFLVGLRFSLAYSVLGLVAAETV------NA 242

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             G+G  I           +   ++    +  L DQ    L R ++ W   + 
Sbjct: 243 DKGLGFLITQGQTYLQTNQVFVGLVIYSLLGLLADQFVRVLERVLLRWRPSYE 295


>gi|258540630|ref|YP_003175129.1| ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|257152306|emb|CAR91278.1| ABC transporter, permease protein [Lactobacillus rhamnosus Lc 705]
          Length = 272

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           +      +  ++   L    F +    A+   W +   I    T       +W       
Sbjct: 13  KRVKPSVNWLKILPWLVPLAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPK 72

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+++R      I   +   +G+  G    I + +    Q+L   P     PL++  +
Sbjct: 73  NIAISLYRATAGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILM 132

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  N   G      +  E+  ++ ++    +  ++ PG
Sbjct: 133 GIG----EPAKIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPG 188

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  S       T+GLG     + E      V+L +LI
Sbjct: 189 ALANILMGVRYALGVMWTTLIVAETIS------ATSGLGYMATNAQELMRMDTVLLCILI 242

Query: 562 MCCFVLALN 570
                   +
Sbjct: 243 YALLGKLSD 251



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           LAF++                     V    I+L     LP+  + +  R  +   I   
Sbjct: 31  LAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNIAISLYRATAGFAIGGS 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +    + +  +L   + ++++IP L  +   ++      P        A I  
Sbjct: 91  VGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGIGEP--------AKIAL 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ M  + YQ +     +L E+ R++ LS    F  +  P ++  ++  +  ++ 
Sbjct: 143 VAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPGALANILMGVRYALG 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          G+G     A +   +  +L  +L    +  L D +   
Sbjct: 203 VMWTTLIVAETIS------ATSGLGYMATNAQELMRMDTVLLCILIYALLGKLSDMIAKS 256

Query: 259 LFRPMIVWSN 268
           L R  + W  
Sbjct: 257 LERLFLGWRQ 266


>gi|19743670|gb|AAL92575.1| putative sulfonate transporter permease component [Delftia
           acidovorans]
          Length = 288

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 13/212 (6%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQ 423
           +   +       ++     +  R    + +  ++ + + +  G      + I       Q
Sbjct: 73  LRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALAAGQSRTGEALIDVIDGLVQ 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P     PL +  +             L+       I  N  A   +      E+A
Sbjct: 133 IKRAVPTLALIPLAIIWLGIGEA----MKVFLIFTAVLIPIYINTHAALRSIDIGHVELA 188

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +  ++   + R + LPG  P +  G   A    W A +V E+ +        TG+G  +
Sbjct: 189 QTLGLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELIN------TQTGIGYLM 242

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             + + G    +V+G+LI     L  +  +  
Sbjct: 243 NRARDWGQTDVIVVGILIYALLGLLSDAAVRR 274



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 88/223 (39%), Gaps = 17/223 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM--- 98
            T P   +          SL  +   +  R  + + + ++   + A  A +SR       
Sbjct: 66  LTAPSQALRTGYEMALDGSLLPHLLASAGRAYTGLFLGIVVGVLLALAAGQSRTGEALID 125

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V+  ++ I +++P L  +   +++            E   +F IFT+ +  +  + + +L
Sbjct: 126 VIDGLVQIKRAVPTLALIPLAIIWLGIG--------EAMKVFLIFTAVLIPIYINTHAAL 177

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I     E++++  LS  +    + +P ++PG    + M++S  W  +V  E+I     
Sbjct: 178 RSIDIGHVELAQTLGLSRAEFIRKVALPGALPGFFVGLRMAVSLCWTALVVLELI----- 232

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                GIG  +  A        I+  +L    +  L D  + R
Sbjct: 233 -NTQTGIGYLMNRARDWGQTDVIVVGILIYALLGLLSDAAVRR 274


>gi|331698281|ref|YP_004334520.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952970|gb|AEA26667.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 300

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 101/275 (36%), Gaps = 10/275 (3%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF-CVVCGVAIGIAWQSI 364
            + L        R +   R         + +      +  + W   +V    I       
Sbjct: 23  LAGLDALDTPTVRRVPWWRRFLRTGVPPIVAFALFIGVWQVIWASAIVPEFKIPAPLAVW 82

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                      VL ++W    ++ R  V   +A +I +P+G+ +     + + I P    
Sbjct: 83  DSFATVVGDGQVLSILW---TSISRAFVGFAMALVIAVPLGLLVARVRVVRAAIGPLLSG 139

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P+  + P  V             +  +++ G+   I   +++G    P  F  V  
Sbjct: 140 LQSLPSVAWVPAAVLWFGLTDST----IYFVVLAGSIPSIANGLVSGIDQIPPIFPRVGK 195

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
               +G    R+I+LP   P ++ G       +W + + +E+ + G   L   GLGA++ 
Sbjct: 196 VIGASGLATARHILLPAALPGFLAGCKQGWAFSWRSLMAAEIIAAGP--LLGIGLGAFLK 253

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           E ++    P+V+  + ++    + +   ++ P+  
Sbjct: 254 EGSDFNDMPKVIAAIFLILVVGIGIELLIFRPIER 288



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 98/254 (38%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R   P I     F+ V  +I    +    +   P  + D     +    +      +  R
Sbjct: 45  RTGVPPIVAFALFIGVWQVIWASAIVPEFKIPAPLAVWDSFATVVGDGQVLSILWTSISR 104

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                 ++L+       L A+ R +   + P+L  +QS+P + ++   V++F        
Sbjct: 105 AFVGFAMALVIAVPLGLLVARVRVVRAAIGPLLSGLQSLPSVAWVPAAVLWFGL------ 158

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +    F +    + ++   +   +  IP     V +    SG     ++ +P ++PG
Sbjct: 159 --TDSTIYFVVLAGSIPSIANGLVSGIDQIPPIFPRVGKVIGASGLATARHILLPAALPG 216

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +       +  W  ++A+E+I  G  +    G+G+++       D+  ++ A+  +L V
Sbjct: 217 FLAGCKQGWAFSWRSLMAAEIIAAGPLLGI--GLGAFLKEGSDFNDMPKVIAAIFLILVV 274

Query: 252 IFLYDQLLFRPMIV 265
               + L+FRP+  
Sbjct: 275 GIGIELLIFRPIER 288


>gi|296157685|ref|ZP_06840519.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295891931|gb|EFG71715.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 280

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +   +   I +   + DV        ++ +R V    I   I + +G+  G       
Sbjct: 61  LAVVKAAWSLIQSGEMWADVK-------VSTWRAVSGFAIGGGIGLVLGLATGLFKPAEI 113

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +    Q++   PA    PLV+                L+  G  + I  N   G  +  
Sbjct: 114 VLDSTVQMVRNIPALAMIPLVILWFGIE----EEAKVFLVALGVFFPIYVNTFHGIRSVD 169

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S        
Sbjct: 170 ANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------AQ 223

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +G+G     + E      VV+G+L+        +  
Sbjct: 224 SGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVL 259



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 96/260 (36%), Gaps = 18/260 (6%)

Query: 16  FPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
                  LA +LV        +   +    P  +V      +    +      +T R +S
Sbjct: 30  LAPWLAPLAILLVWEFAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADVKVSTWRAVS 89

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I      V        +   +VL   + ++++IP L  +   +++F           
Sbjct: 90  GFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMVRNIPALAMIPLVILWFGIE-------- 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  + +  + ++  +L E++RS+ + G+  + ++ +P ++P ++ 
Sbjct: 142 EEAKVFLVALGVFFPIYVNTFHGIRSVDANLIEMARSYGVRGFALYRHVILPGALPSILV 201

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +    W  ++ +E I          GIG     A +      ++  +L    +  L
Sbjct: 202 GVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKL 255

Query: 255 YDQL---LFRPMIVWSNKFR 271
            D L   L R  + W   ++
Sbjct: 256 ADVLAKSLERVSLRWHPAYQ 275


>gi|239833805|ref|ZP_04682133.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239821868|gb|EEQ93437.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 296

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 29/285 (10%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            ++ NV +  R   ++ F      ++           +  +  +V  + +   W  +  +
Sbjct: 8   SMAMNVHQETRNWSMLEFVTRARPVKPGKIYGAPGDGNSGFISLVTALILLGLWFLVTGM 67

Query: 368 VNHFTYQDVLYVIWLG-------------------CITMFRVVVLIIIASIIWIPVGIWI 408
                          G                     ++ RV+    IA +  IP+GI +
Sbjct: 68  GWVKPLFLPSPFAVYGKFMVAMTDGVANSTLAEHTLASLGRVLGAFAIACVTAIPIGIMM 127

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +   + P  +     P   + PL++  +             L+       +    
Sbjct: 128 GMSSFVRGVLDPIIEFYRPLPPLAYLPLIIIWLGIG----EFPKVFLIFLAIFAPMAIAA 183

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            AG  +   +    A +   +  +    +I+    P   TG     G  W   + +E+ +
Sbjct: 184 RAGVRSVSTEQIHAAYAMGASRTQVITQVIMKAAMPEIFTGMRIGIGVGWTTLVAAEMVA 243

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    GLG  +  + +  +   V++G++++  F  A +  +
Sbjct: 244 ------AHRGLGFMVLNAAQFLASDTVIMGIIVIGVFAFAFDLLI 282



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+L A  I+ +       +   S  +  VL PI++  + +P L +L  
Sbjct: 96  STLAEHTLASLGRVLGAFAIACVTAIPIGIMMGMSSFVRGVLDPIIEFYRPLPPLAYLPL 155

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E   +F IF +    M  +    + ++  +    + +   S  Q
Sbjct: 156 IIIWLGIG--------EFPKVFLIFLAIFAPMAIAARAGVRSVSTEQIHAAYAMGASRTQ 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +  +MP +   M + +  GW  +VA+EM+          G+G  +  A +    
Sbjct: 208 VITQVIMKAAMPEIFTGMRIGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAQFLAS 261

Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
             ++  ++ +    F +D L   L + +I W  K
Sbjct: 262 DTVIMGIIVIGVFAFAFDLLIRYLEKVLIPWKGK 295


>gi|297565266|ref|YP_003684238.1| ABC transporter-like protein [Meiothermus silvanus DSM 9946]
 gi|296849715|gb|ADH62730.1| ABC transporter related protein [Meiothermus silvanus DSM 9946]
          Length = 492

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+   +      T+    + ++ A ++  P+G  +G    +   + PF   L A P  + 
Sbjct: 290 QNAPQLAHGALATLEVAALGVLCALLVGTPIGYLMGRSRTVERLLSPFIVALQAIPTVIV 349

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V    +      +  +      + + ++ + + G       ++EV  +   + W  
Sbjct: 350 APLLVIWFGFSLEAKLITTT----LISIFPVMVSTMVGVREVDRIYREVFQTIGASPWGV 405

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + +PG  P  + G       A   ++V++         +  GLGA+         + 
Sbjct: 406 FTKLEVPGALPVVLGGLRLTVSLALIGAVVADF------TFQGEGLGAFANTERLSFRYA 459

Query: 554 EVVLGVLIMCCFVLALNRFL 573
                V +     +AL   +
Sbjct: 460 SAFAAVGVNVALGIALYGLV 479



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 15/227 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P           +   L   A  T       ++ +LL       L  +SR +  +L P +
Sbjct: 279 PSPWAVWQAAVQNAPQLAHGALATLEVAALGVLCALLVGTPIGYLMGRSRTVERLLSPFI 338

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +Q+IP +      V++F      K+I   L +IF +          S    +  + R 
Sbjct: 339 VALQAIPTVIVAPLLVIWFGFSLEAKLITTTLISIFPVMV--------STMVGVREVDRI 390

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             EV ++   S W  F  L VP ++P ++  + +++S      V +      D      G
Sbjct: 391 YREVFQTIGASPWGVFTKLEVPGALPVVLGGLRLTVSLALIGAVVA------DFTFQGEG 444

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +G++           +   A+   + +      L+   +  W  ++R
Sbjct: 445 LGAFANTERLSFRYASAFAAVGVNVALGIALYGLV-TLLEYWVLRYR 490


>gi|149201736|ref|ZP_01878710.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
 gi|149144784|gb|EDM32813.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
          Length = 278

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + +   ++S+ V  +         AA   RL   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEETTESLTLVISSCVFCMALGVPLGIAAAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF +            +  + N P+ L E +++F  +  Q  W
Sbjct: 150 FFG---IGMVPGLIATVIFVVPAP-----IRLTHLGISNTPQPLLEAAQAFGATNRQTLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV          ++   G+G  +  AI   ++   
Sbjct: 202 KVELPYALPQIMAGLNQTIMLSLSMVVI-------GALVGADGLGVPVLRAINTVNIALG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             + L ++ V  + D++L
Sbjct: 255 FESGLMIVVVAIVLDRML 272



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 93/276 (33%), Gaps = 14/276 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G  +  FF  L +N       L V+     + FL +    +  + + I    V     +
Sbjct: 11  VGKWAEGFFLWLQDNAAGFFDMLSVLMEGLIDAFLWVL---QTPHPMVIIGVFVALTWVL 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +W++  +++  F +            ++  V+   +    + +P+GI    RP +   
Sbjct: 68  QRSWKTCLFVLLGFLFILNQGYWEETTESLTLVISSCVFCMALGVPLGIAAAHRPRLYDG 127

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   L+   P  V+    +       +   +   + ++      I      G S  P 
Sbjct: 128 MRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLIATVIFVVPA---PIRL-THLGISNTPQ 183

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A +F  T  +    + LP   P  + G       + +  ++  +           
Sbjct: 184 PLLEAAQAFGATNRQTLWKVELPYALPQIMAGLNQTIMLSLSMVVIGALVG-------AD 236

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  +  +    +        L++    + L+R L
Sbjct: 237 GLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272


>gi|226945116|ref|YP_002800189.1| aliphatic sulfonate ABC transporter permease [Azotobacter
           vinelandii DJ]
 gi|226720043|gb|ACO79214.1| aliphatic sulfonate ABC transporter permease protein [Azotobacter
           vinelandii DJ]
          Length = 264

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 105/271 (38%), Gaps = 17/271 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             ++ R+ P +  L       G +   L   +    P  +++     L    +  + + +
Sbjct: 7   DKLALRLSPWVLPLALLGFWQGAVASGLLSTRILPAPSAVLEAGWALLSSGEIWTHLAIS 66

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R      I      +   +   S+    +L   + +++++P L  +   +++F     
Sbjct: 67  GWRAGIGFAIGGGLGLLLGFITGLSKWGERLLDSSVQMVRNVPHLALIPLVILWFGID-- 124

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E A IF +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P +
Sbjct: 125 ------ESAKIFLVALGTLFPIYLNTYHGIRNVDAGLVEMARSYGLSGFSLFRQVILPGA 178

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  ++   W  ++ +E I          GIG     A +      ++ A+L  
Sbjct: 179 LPSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLY 232

Query: 249 LGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
             +  L D   + L R  + W   ++++   
Sbjct: 233 AVLGKLADVAARTLERLWLRWHPAYQVKAGA 263



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 10/160 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  +    Q++   P     PLV+                L+  GT + I  N   
Sbjct: 91  SKWGERLLDSSVQMVRNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYLNTYH 146

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E+A S+ ++G+  +R +ILPG  P  + G   A G  W   IV+E  S  
Sbjct: 147 GIRNVDAGLVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWLTLIVAETIS-- 204

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                ++G+G     + E      VVL +L+        +
Sbjct: 205 ----ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 240


>gi|317970089|ref|ZP_07971479.1| binding-protein-dependent transport systems inner membrane
           component [Synechococcus sp. CB0205]
          Length = 253

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 91/230 (39%), Gaps = 12/230 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASII 400
           ++ + W+ +    ++   +      V     Q     I L     ++ RV +   +++ +
Sbjct: 19  VVLLLWYAITASGSVNKLFLPSPQAVWSAGQQQWSSGILLKDAIASIQRVFIGFAMSAGL 78

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +G  P I   ++P   L+   PA  F PL++           L   LL+  GT
Sbjct: 79  ALPLGILMGTNPVICRLLEPLMGLIRYMPAPAFIPLLIIYFGL----DELPKVLLIFIGT 134

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            ++    ++      P +  E A +           ++ P I P  +         AWN 
Sbjct: 135 FFFNTLMIMDSVKFVPRELVETAMTLGGRTMPILTRVVAPFIAPQVLDAYRINMASAWNL 194

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            IV+E+ +       T GLG  I+ +       E+ +G++++    L ++
Sbjct: 195 VIVAELVA------ATEGLGKRISLAQRFLRTDEIFMGLIVIGLIGLVID 238



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L   I             P+ +            L + A  +  R+     +S  
Sbjct: 18  MVVLLLWYAITASGSVNKLFLPSPQAVWSAGQQQWSSGILLKDAIASIQRVFIGFAMSAG 77

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   +  +  +L P++ +++ +P   F+   ++YF           EL  +  
Sbjct: 78  LALPLGILMGTNPVICRLLEPLMGLIRYMPAPAFIPLLIIYFGLD--------ELPKVLL 129

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF    +  T  +  S+  +PR+L E + +           +  PF  P ++    ++M+
Sbjct: 130 IFIGTFFFNTLMIMDSVKFVPRELVETAMTLGGRTMPILTRVVAPFIAPQVLDAYRINMA 189

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  V+ +E++          G+G  I+LA +      I   ++ +  +  + D L FR
Sbjct: 190 SAWNLVIVAELVA------ATEGLGKRISLAQRFLRTDEIFMGLIVIGLIGLVID-LGFR 242

Query: 262 PMIVWSNKF 270
            ++  +  +
Sbjct: 243 ALMRRACSW 251


>gi|239983573|ref|ZP_04706097.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291455386|ref|ZP_06594776.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces albus J1074]
 gi|291358335|gb|EFE85237.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces albus J1074]
          Length = 290

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 95/278 (34%), Gaps = 21/278 (7%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA-----------I 357
           L+          G  R   P    +L        +    W  V                +
Sbjct: 11  LAEPGAAPTAVPGPARRRRPSALWRLALPVGSLLLFLALWQAVAAAGTWSETLVPPPAKV 70

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             A+ ++    +     +  Y++    I++ R+     +   + + +G+ +G    + S 
Sbjct: 71  WDAFLAVSTTRDGVRGYNGTYLVEHLGISLRRIAFGAGVGIALGVLLGLVMGTVRWVRSL 130

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +P+   L   P   +F L++  +             L+       +     A  +A P 
Sbjct: 131 FEPWISFLRTLPPLAYFSLLIVWLGI----DEEPKITLLAVAAFPPVAVATTAAVAAAPR 186

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A +   + W   + ++LP   P   TG   A G A+++ + +E+ +         
Sbjct: 187 HLVEAARALGASRWEVVKDVVLPSALPETFTGVRLAVGVAYSSLVAAELVNG------LP 240

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G+G  + ++    + P V++G+  +    L ++  L  
Sbjct: 241 GIGGMVKDAANYNNTPVVLVGIAAIGVSGLLIDALLVR 278



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 78/201 (38%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+     + +    +   +    R +  +  P +  ++++P L + +  +
Sbjct: 92  LVEHLGISLRRIAFGAGVGIALGVLLGLVMGTVRWVRSLFEPWISFLRTLPPLAYFSLLI 151

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+       K+    +AA   +  +    +  +           L E +R+   S W+  
Sbjct: 152 VWLGIDEEPKITLLAVAAFPPVAVATTAAVAAAPRH--------LVEAARALGASRWEVV 203

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P     + +++   +  +VA+E++        LPGIG  +  A    +   
Sbjct: 204 KDVVLPSALPETFTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPV 257

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L  +  +     L D LL R
Sbjct: 258 VLVGIAAIGVSGLLIDALLVR 278


>gi|196042270|ref|ZP_03109549.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|229091918|ref|ZP_04223106.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-42]
 gi|196026889|gb|EDX65517.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|228691399|gb|EEL45159.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-42]
          Length = 282

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 17/236 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       L    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDSFKGET 280



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 391 VVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   +  S+     G +IG            F       + P  Q+L   P     PL V
Sbjct: 78  LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFV 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   +      LL+  G  + +  N   G     +   +VA     +  +    +I
Sbjct: 138 LWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLI 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G
Sbjct: 194 LPAALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVG 247

Query: 559 VLIMCCFVLALNRFL 573
           ++I        +  +
Sbjct: 248 IIIFAFVGKFSDSLV 262


>gi|78066175|ref|YP_368944.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. 383]
 gi|77966920|gb|ABB08300.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia sp. 383]
          Length = 270

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 12/254 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                       +  +   V   L + W     +  ++  +  + +  +   ++      
Sbjct: 6   STTGAAVAARAWRGVAPWLVPLALLVAWEVGARIGWLSTRVLPEPVAVVRAAWSLVTSGE 65

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+
Sbjct: 66  MWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           L+  G  + +  N   G  +   +  E+A S+ + G+  +R +I
Sbjct: 126 LWFGI----DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVI 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  + G   A G  W   IV+E  S        +G+G     + E      VV+G
Sbjct: 182 LPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVG 235

Query: 559 VLIMCCFVLALNRF 572
           +L+        +  
Sbjct: 236 ILLYAVLGKLADVL 249



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++   +   +     +    P  +V      +    +      +T R 
Sbjct: 18  RGVAPWLVPLALLVAWEVGARIGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 78  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 132 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 190 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   L R  + W   ++
Sbjct: 244 KLADVLAKWLERVTLRWHPAYQ 265


>gi|121535484|ref|ZP_01667293.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121305903|gb|EAX46836.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 268

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 104/273 (38%), Gaps = 19/273 (6%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI------GYIVNHFTY 373
           L  ++   P+  +       ++ +  +        +  G     +        I +    
Sbjct: 2   LQKLKLFVPKADIPASVYFSLTVLSFVLLLGAWSVLTYGGFVSPLFLPTPGQIIASAVVL 61

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +      ++ RV    ++A+II +P+GI +G      + ++P    L   PA+ F
Sbjct: 62  FTEFDLTKDILASVARVTGGFLLAAIIGVPLGILMGSLKVFEAFVEPLLGFLRYMPASAF 121

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +  +             ++ FGT + +   V+           + A +  ++    
Sbjct: 122 IPLFILWLGIGESEK----VAVIFFGTFFQLTLMVMDVTKNVSQALIDTAYTLGVSKRGV 177

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +ILP   P  V       G AW   +V+E+ +       ++GLG  I +S       
Sbjct: 178 FWRVILPASMPGIVDTLRITFGWAWTYLVVAEIVA------ASSGLGHMIMQSQRFLKTS 231

Query: 554 EVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
            +++G++I+    + ++   ++L++ L+ +  +
Sbjct: 232 HIIVGIIIIGVIGIIIDLAFKWLYNRLFPWLRK 264



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 86/215 (40%), Gaps = 18/215 (8%)

Query: 22  LLAFVLVIGIINILLHGI----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +L+FVL++G  ++L +G          P  I+    +      L +    +  R+    +
Sbjct: 24  VLSFVLLLGAWSVLTYGGFVSPLFLPTPGQIIASAVVLFTEFDLTKDILASVARVTGGFL 83

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ +       L    +     + P+L  ++ +P   F+   +++            E  
Sbjct: 84  LAAIIGVPLGILMGSLKVFEAFVEPLLGFLRYMPASAFIPLFILWLGIG--------ESE 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  IF    + +T  +     N+ + L + + +  +S    FW + +P SMPG+V  + 
Sbjct: 136 KVAVIFFGTFFQLTLMVMDVTKNVSQALIDTAYTLGVSKRGVFWRVILPASMPGIVDTLR 195

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           ++    W ++V +E++          G+G  I  +
Sbjct: 196 ITFGWAWTYLVVAEIVAASS------GLGHMIMQS 224


>gi|148259997|ref|YP_001234124.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|326403047|ref|YP_004283128.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146401678|gb|ABQ30205.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|325049908|dbj|BAJ80246.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 286

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 17/238 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +L++    +  +  +   +   ++  +   L+          T   +  A +  +L   
Sbjct: 61  LILIVIFAGLTWYFKKSWKLALFVLIALTFVLNQGY-WGRTIETLSLVAYATLACMLIGV 119

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA    L  +L P+LD+MQ++P   +L  T+V F       +I   +  +     
Sbjct: 120 PLGVAAAHHPTLYRILRPVLDLMQTLPTFVYLIPTLVLFGLGSVPGLISTVVFVVPTPVR 179

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     Y  + N+PR L E  ++F  S W+  W + +P +MP ++  +   +    
Sbjct: 180 L--------TYVGIVNVPRPLIEAGQAFGASPWELLWKVEIPAAMPTILAGLTQVIMLSL 231

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             VV + ++  G       G+G  +  A++   +     + L ++ V  + D+ +FRP
Sbjct: 232 SMVVIAALVGAG-------GLGEPVVEAMETVQIGRGFTSGLAIVIVAVILDR-VFRP 281



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 77/240 (32%), Gaps = 13/240 (5%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           +   ++++  +    +  G+      +W+   +++   T+            T+  V   
Sbjct: 51  TTGALNWVSPLILIVIFAGLTWYFKKSWKLALFVLIALTFVLNQGYWGRTIETLSLVAYA 110

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +   +I +P+G+     P +   ++P   L+   P  V+    +       +   +   
Sbjct: 111 TLACMLIGVPLGVAAAHHPTLYRILRPVLDLMQTLPTFVYLIPTLVLFGLGSVPGLISTV 170

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + ++             G    P    E   +F  + W     + +P   P  + G    
Sbjct: 171 VFVVPTPVRL----TYVGIVNVPRPLIEAGQAFGASPWELLWKVEIPAAMPTILAGLTQV 226

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + +  +++ +   G       GLG  + E+ E           L +    + L+R  
Sbjct: 227 IMLSLSMVVIAALVGAG-------GLGEPVVEAMETVQIGRGFTSGLAIVIVAVILDRVF 279


>gi|52352353|gb|AAU43643.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transporter
           [uncultured archaeon GZfos23H7]
          Length = 176

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 10/166 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G +  ++    P   LL   P   + PL++  +    L P      L+   + + +L+N
Sbjct: 1   MGSKEFVNKSFHPIFSLLYPIPVLGWAPLLMVWIGINELLP----VALIFLCSFFPVLYN 56

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G      +  + A +   +  +    ++LP   P   TG     G AW   I +E+ 
Sbjct: 57  TITGIKGVDREVIKAARTLGASDMKILTTVVLPLAIPNIFTGLRLEAGMAWRVVIAAEMV 116

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        TG+GA +  S        +++ ++++    LA  R  
Sbjct: 117 AIP------TGIGALMIRSESLLRMDVIIVCLMVLSVMCLAFERVF 156



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 69/170 (40%), Gaps = 14/170 (8%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
                 +     PI  ++  IP+LG+    +V+            EL  +  IF    + 
Sbjct: 1   MGSKEFVNKSFHPIFSLLYPIPVLGWAPLLMVWIGIN--------ELLPVALIFLCSFFP 52

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           + ++    +  + R++ + +R+   S  +    + +P ++P +   + +     W  V+A
Sbjct: 53  VLYNTITGIKGVDREVIKAARTLGASDMKILTTVVLPLAIPNIFTGLRLEAGMAWRVVIA 112

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +EM+ +        GIG+ +  +     +  I+  ++ +  +   ++++ 
Sbjct: 113 AEMVAIPT------GIGALMIRSESLLRMDVIIVCLMVLSVMCLAFERVF 156


>gi|71736948|ref|YP_276994.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71557501|gb|AAZ36712.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 265

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGKRLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VVL +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLAD 240



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGKRLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|325846107|ref|ZP_08169201.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481700|gb|EGC84735.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 321

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I+    +    + + + +   ++ +    D  +++     ++  +     I +I+ I
Sbjct: 87  ILIIYDLLTLKFAVLPLPYFAWLDMIMNSMIADKRFLLESTLASLKLLFTGYFIGAILGI 146

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GI  G+   +   + PF +LL   P   + P+V+   +            ++  G  +
Sbjct: 147 ITGILAGYSKKVDYWVDPFLKLLGPIPTTTWIPVVMVLATSLFGG----AVFIIGLGVWF 202

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                 + G       + E A +         R I +P   P    G I+    A  + I
Sbjct: 203 QTTLATMTGIKNIDKSYYEAAKTLGANENELVRKIAIPSASPNIFQGLISGMSSACTSLI 262

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI   +    +  +   ++I+    + +N  L
Sbjct: 263 VAEMLG------VESGLGWYITWKSSWADYSSMYGAIIILALTFIIVNMIL 307



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 92/239 (38%), Gaps = 16/239 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAMVISL 80
             F ++I    + L            +D++  ++  D   L +    +   + +   I  
Sbjct: 83  FVFAILIIYDLLTLKFAVLPLPYFAWLDMIMNSMIADKRFLLESTLASLKLLFTGYFIGA 142

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   +   LA  S+++   + P L ++  IP   ++   +V   +L+ G        A+F
Sbjct: 143 ILGIITGILAGYSKKVDYWVDPFLKLLGPIPTTTWIPVVMVLATSLFGG--------AVF 194

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I     +  T +    + NI +   E +++   +  +    + +P + P +   ++  M
Sbjct: 195 IIGLGVWFQTTLATMTGIKNIDKSYYEAAKTLGANENELVRKIAIPSASPNIFQGLISGM 254

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           S     ++ +EM+ V        G+G YI       D  ++  A++ +     + + +L
Sbjct: 255 SSACTSLIVAEMLGVES------GLGWYITWKSSWADYSSMYGAIIILALTFIIVNMIL 307


>gi|325678371|ref|ZP_08157991.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324109872|gb|EGC04068.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 359

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 76/208 (36%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V      D  YV+     ++           ++ +  GI IG+ P +   + P  ++   
Sbjct: 147 VAEAYLADGEYVLQNTLYSLRLYSAGFSCGVLLGVGTGILIGWFPKVYYWVYPVLKITGV 206

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P  ++ +     N       L++    + I F    G  + P    E A    
Sbjct: 207 VPAVAWMPFALTLLP----NSFTAAVFLIVICAWFQIAFLTAQGIQSTPKQNYEAARILG 262

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                   ++ +P   P   TG  +A   A+   ++SE+        +  GLG YI +S 
Sbjct: 263 SDPVDLIFHVAVPHAMPDIFTGITSANAMAFTTLVMSEMLG------QPGGLGYYINQSK 316

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++ +V+  ++IM      +N  +  
Sbjct: 317 VWSAYYKVLAAIVIMAVLFSLINHIIGR 344



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 14/236 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + V  I    L    +   P           D   + Q    +     +     +L    
Sbjct: 123 LAVWDIGGTKLQIFAQPFFPGPAQVAEAYLADGEYVLQNTLYSLRLYSAGFSCGVLLGVG 182

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              L     ++   + P+L I   +P + ++ F +    N +         AA+F I   
Sbjct: 183 TGILIGWFPKVYYWVYPVLKITGVVPAVAWMPFALTLLPNSFT--------AAVFLIVIC 234

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + + F   Q + + P+   E +R          +++ VP +MP +   +  + +  + 
Sbjct: 235 AWFQIAFLTAQGIQSTPKQNYEAARILGSDPVDLIFHVAVPHAMPDIFTGITSANAMAFT 294

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +V SEM+          G+G YI  +        +L A++ M  +  L + ++ R
Sbjct: 295 TLVMSEMLG------QPGGLGYYINQSKVWSAYYKVLAAIVIMAVLFSLINHIIGR 344


>gi|148258812|ref|YP_001243397.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146410985|gb|ABQ39491.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 282

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 92/250 (36%), Gaps = 17/250 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++       +    P  +   +        L ++   T  R+       +    +   + 
Sbjct: 47  LVWAGWSNGRLVPPPSKVFTTIAELARSGELTRHIVATLSRVGIGFGFGVAAGTLLGGIC 106

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
                   ++ P +  +++IP + ++   +++       KV    +   F ++       
Sbjct: 107 GYWGLARRLVDPTIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY------- 159

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +  ++ ++ R + EV R FRLSG      + +P  +P  V ++ + +  GW FVVA+
Sbjct: 160 -LGLTGAILSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAA 218

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
           E +   +      G+G  +    +      I+ A++    +    D LL     P++ W 
Sbjct: 219 EFMGASE------GLGYLLIDGQQLGKPAQIVAAIVIFAIIGKATDWLLEIATAPLLRWQ 272

Query: 268 NKFRLERTTG 277
           + F  +    
Sbjct: 273 DSFARQSGAA 282



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T+ RV +           +G   G+       + P  Q L A P+  + PL
Sbjct: 75  GELTRHIVATLSRVGIGFGFGVAAGTLLGGICGYWGLARRLVDPTIQALRAIPSIAWVPL 134

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +  +  +       L+  G  + +   +     +      EV   F ++G    R 
Sbjct: 135 FILWLGIFETSK----VALIAVGVFFPVYLGLTGAILSVDRKIVEVGRIFRLSGPAMIRR 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP + P YV       G  W   + +E          + GLG  + +  + G   ++V
Sbjct: 191 ILLPAVLPAYVVSLRVGLGLGWMFVVAAEFMG------ASEGLGYLLIDGQQLGKPAQIV 244

Query: 557 LGVLIMCCFVLALNRFL 573
             ++I      A +  L
Sbjct: 245 AAIVIFAIIGKATDWLL 261


>gi|313897772|ref|ZP_07831313.1| ABC transporter, substrate-binding protein, QAT family [Clostridium
           sp. HGF2]
 gi|312957307|gb|EFR38934.1| ABC transporter, substrate-binding protein, QAT family [Clostridium
           sp. HGF2]
          Length = 523

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 77/188 (40%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L ++++++        L +  ++L   ++ I +I+Q+IP L  L F + +         
Sbjct: 26  TLFSVILAIAIGVPLGILISYLKKLTKPVLGIANIVQAIPSLALLGFAIPFLGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AIF +    +  +  + Y  + +IP    E ++   ++  Q    + +P ++P 
Sbjct: 81  ---SKPAIFMVILYSLLPIIKNTYTGIQSIPDQTLEAAKGIGMTRAQILIKVQIPMALPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    I   G+G  +   I+  + + IL   +    +
Sbjct: 138 IMAGVRIS------AVTAVGLMTIAAF-IGAGGLGYLVYSGIRTSNNMQILAGAVPACIL 190

Query: 252 IFLYDQLL 259
             + D  +
Sbjct: 191 ALVIDSFM 198



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +I+A  I +P+GI I +   ++  +   A ++ A P+       +  +       + 
Sbjct: 27  LFSVILAIAIGVPLGILISYLKKLTKPVLGIANIVQAIPSLALLGFAIPFLGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++I  +   I+ N   G  + P+   E A    +T  +    + +P   P  + G 
Sbjct: 83  PAIFMVILYSLLPIIKNTYTGIQSIPDQTLEAAKGIGMTRAQILIKVQIPMALPIIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +       +  +++ G +  C   L ++
Sbjct: 143 RISAVTAVGLMTIAAFIGAG-------GLGYLVYSGIRTSNNMQILAGAVPACILALVID 195

Query: 571 RFL 573
            F+
Sbjct: 196 SFM 198


>gi|172060536|ref|YP_001808188.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171993053|gb|ACB63972.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 270

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILP   P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPSALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA ++V  +   +     +    P  +V      +    +      +T R L    I   
Sbjct: 27  LALLVVWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGFAIGGG 86

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+   + L   + ++++IP L  +   +++F           E A +F 
Sbjct: 87  VGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFL 138

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P ++  +  ++ 
Sbjct: 139 VALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPSALPSILVGVRFALG 198

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D L   
Sbjct: 199 LMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKW 252

Query: 259 LFRPMIVWSNKFR 271
           + R  + W   ++
Sbjct: 253 IERTTLRWHPAYQ 265


>gi|159185138|ref|NP_355236.2| ABC transporter, membrane spanning protein (proline/glycine
           betaine) [Agrobacterium tumefaciens str. C58]
 gi|159140409|gb|AAK88021.2| ABC transporter, membrane spanning protein (proline/glycine
           betaine) [Agrobacterium tumefaciens str. C58]
          Length = 343

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 93/234 (39%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ I+  L    + +        +  + +      +  + T   +++A  + ++    
Sbjct: 116 LIIVAIVTALSAWTRRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIP 175

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA+ + +   + P LD+MQ+IP   +L   +V F     G V G     IFAI   
Sbjct: 176 LGILAARRKWIYAGMRPALDLMQTIPTFVYLIPALVLFGL---GMVPGLIATVIFAIPAP 232

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + +F  +  Q    + +PF+ P ++  +  ++     
Sbjct: 233 -----VRLTRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLS 287

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV S ++          G+G  +  A+   ++     A L ++ +  + D+L 
Sbjct: 288 MVVISALVGAN-------GLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLF 334



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  II IP+GI    R  I + ++P   L+   P  V+    +       
Sbjct: 158 TLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPALDLMQTIPTFVYLIPALVLFGLGM 217

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I             G  + P    E A +F  T  +  R + LP   P 
Sbjct: 218 VPGLIATVIFAIPAPVRL----TRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQ 273

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  ++S +           GLG  +  +    +        L +   
Sbjct: 274 IMAGLTQTIMLSLSMVVISALVG-------ANGLGVPVVRALNTVNIAMGFEAGLCIVIL 326

Query: 566 VLALNRFLWHP 576
            + L+R    P
Sbjct: 327 AIVLDRLFRLP 337


>gi|239820700|ref|YP_002947885.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239805553|gb|ACS22619.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 274

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 77/244 (31%), Gaps = 10/244 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
               N L+  ++  ++  + + W   V    +          +      D   +     +
Sbjct: 22  PPRINPLERYASLLLAVAILLIWQFAVPLAGLSEFVLPTPLAIAKRMVTDFNLLATHSYV 81

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++  +I IP+ + I +       + P    L   P     PL+V  + Y  
Sbjct: 82  TLLEVLGGFLLGVLIGIPLALAIFYSKVFERAVYPLLVALQTVPKIALAPLLVLYLGYGW 141

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L    + + I+ + + G  +       +  S   +  + +  + LP   P 
Sbjct: 142 APK----ISLAFLISFFPIVISTVVGLQSLDKALVNMVRSMGASESQTFFKVRLPAALPS 197

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   A   A   +I+ E  +         GLG    ++  +         V+ +   
Sbjct: 198 IFGGLKVAISLAVIGAIIGEYIA------AERGLGYLQLQANSQFDTTLNFATVVTISLI 251

Query: 566 VLAL 569
            + L
Sbjct: 252 GVLL 255



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 88/227 (38%), Gaps = 14/227 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + L G+ E  +P  +     +  D + L  ++  T L +L   ++ +L     A     
Sbjct: 47  AVPLAGLSEFVLPTPLAIAKRMVTDFNLLATHSYVTLLEVLGGFLLGVLIGIPLALAIFY 106

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+     + P+L  +Q++P +      V+Y    +  K+  A L + F         +  
Sbjct: 107 SKVFERAVYPLLVALQTVPKIALAPLLVLYLGYGWAPKISLAFLISFF--------PIVI 158

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S    L ++ + L  + RS   S  Q F+ + +P ++P +   + +++S      +  E 
Sbjct: 159 STVVGLQSLDKALVNMVRSMGASESQTFFKVRLPAALPSIFGGLKVAISLAVIGAIIGEY 218

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           I          G+G     A  + D       ++T+  +  L   +L
Sbjct: 219 IA------AERGLGYLQLQANSQFDTTLNFATVVTISLIGVLLYFVL 259


>gi|169335298|ref|ZP_02862491.1| hypothetical protein ANASTE_01710 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258036|gb|EDS72002.1| hypothetical protein ANASTE_01710 [Anaerofustis stercorihominis DSM
           17244]
          Length = 519

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            + +  ++     +       A++ S++       L +  +     ++ + +I+Q+IP +
Sbjct: 8   FSANASTILDLFIKHIELTFIAIIASIVIGVPLGILISYVKPAKKPIMALTNIIQAIPSM 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F + +         IG + A I  I  S +  +  + Y  L N+  D  E ++   
Sbjct: 68  ALLGFLIPFVG-------IGTKPAIIMVILYSLL-PIVKNTYAGLSNVNSDTLEAAKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   I
Sbjct: 120 LTKLQILYKVQFPLALPVILAGVRIS------AVSAVGLMTLAAF-IGASGLGYLVYAGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  +   IL   +    +    D + 
Sbjct: 173 RTVNNNQILSGAIPACFLALFIDYIF 198



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + II + +I +P+GI I +       I     ++ A P+      ++  V         
Sbjct: 27  FIAIIASIVIGVPLGILISYVKPAKKPIMALTNIIQAIPSMALLGFLIPFVGIGTK---- 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++I  +   I+ N  AG S   +D  E A    +T  +    +  P   P  + G 
Sbjct: 83  PAIIMVILYSLLPIVKNTYAGLSNVNSDTLEAAKGIGLTKLQILYKVQFPLALPVILAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++            +GLG  +       +  +++ G +  C   L ++
Sbjct: 143 RISAVSAVGLMTLAAFIG-------ASGLGYLVYAGIRTVNNNQILSGAIPACFLALFID 195

Query: 571 RFL 573
              
Sbjct: 196 YIF 198


>gi|295698912|ref|YP_003606805.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295438125|gb|ADG17294.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 288

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 14/220 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+ VI ++                +      L    L ++   + +R+     I    
Sbjct: 45  VAFLAVIELLVRASILPMHLVPAPSAIAQTLWDLGAARLARHVGASVIRVYGGFAIGAAL 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       SRR+  +L P    +++IP L ++   +++            E   I  I
Sbjct: 105 ALLIGAAMGLSRRVDALLDPAFQALRAIPSLAWVPILLLWMGID--------EAPKITLI 156

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S+   +  + R L E     RLS    F  + +P SMP +   +   +S 
Sbjct: 157 AIGAFFPVQLSVVAGIRGVDRKLIEFGELNRLSRRALFTRILLPASMPQIFTGLRTGLSL 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            W F+VA+E+I          G+G  ++   +      + 
Sbjct: 217 AWMFMVAAELIA------ATRGLGYLLSDGRETGRPDLVF 250



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 76/235 (32%), Gaps = 10/235 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R   P    +          L +    V   +       +   I           +  
Sbjct: 26  PPRAIDPLRLWRYAGLALPVAFLAVIELLVRASILPMHLVPAPSAIAQTLWDLGAARLAR 85

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ RV     I + + + +G  +G    + + + P  Q L A P+  + P+++  +
Sbjct: 86  HVGASVIRVYGGFAIGAALALLIGAAMGLSRRVDALLDPAFQALRAIPSLAWVPILLLWM 145

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  +V+AG         E      ++    +  I+LP 
Sbjct: 146 GI----DEAPKITLIAIGAFFPVQLSVVAGIRGVDRKLIEFGELNRLSRRALFTRILLPA 201

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   TG  T    AW   + +E+ +       T GLG  +++  E G    V 
Sbjct: 202 SMPQIFTGLRTGLSLAWMFMVAAELIA------ATRGLGYLLSDGRETGRPDLVF 250


>gi|188583124|ref|YP_001926569.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346622|gb|ACB82034.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 357

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     ++S++ +P+GI  G +P I+   +P  + +   PA  F  L+V+ +  Y 
Sbjct: 165 SIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD 224

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      R  R +I+P + P 
Sbjct: 225 G----PKIAIIVIGTFFQQVLVIANTTRRVDPLLVEAALTMGSRNLRLIRRVIVPAVLPQ 280

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   +L++   
Sbjct: 281 IYRDQRILLGWAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLV 334

Query: 566 VLALNR---FLWHPLYLYGT 582
            +A +     +   L+ Y  
Sbjct: 335 GIATDIALALIGRRLFPYAR 354



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 17/223 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
            +   P   D   LP     +   +     +S L       L      +  +  P+++ +
Sbjct: 145 ALTAPPPQRDAIWLPASLWHSIQIIFWGFTLSSLVGVPLGILCGAQPTIARLTEPVIEFV 204

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P   F    V         K        I  I     +     +  +   +   L E
Sbjct: 205 RYLPAPAFGALMVAILGIYDGPK--------IAIIVIGTFFQQVLVIANTTRRVDPLLVE 256

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            + +      +    + VP  +P +  +  + +   W +++ +E+I          GI  
Sbjct: 257 AALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLGWAWTYLIVAELIGTSS------GITF 310

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           +I    + Q    +  A+L +  V    D    L+ R +  ++
Sbjct: 311 FITQQARYQHFDNVYAAILVIGLVGIATDIALALIGRRLFPYA 353


>gi|27382120|ref|NP_773649.1| aliphatic sulfonate ABC transporter permease protein
           [Bradyrhizobium japonicum USDA 110]
 gi|27355290|dbj|BAC52274.1| aliphatic sulfonate ABC transporter permease protein
           [Bradyrhizobium japonicum USDA 110]
          Length = 268

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 330 NFLQLCSNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGC-- 384
           + + L    R+     +  W   +  VAI       G++         DV +  W     
Sbjct: 5   DSISLPRRVRLPRAGGLVRWIVPLAIVAIWQLACVTGFVPTRVLPAPSDVAFAGWKLLLS 64

Query: 385 --------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                   ++ +R  +  +I   I    G+  G     +       Q++   P     PL
Sbjct: 65  GELARNIWVSFWRASIGFLIGGSIGFAFGLANGLSQLSAKLTDTTLQMVRNVPHLALIPL 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + I  N + G         E+   + ++    +R 
Sbjct: 125 VILWFGI----DESAKLFLVALGVFFPIYLNTLHGIRTVDPQLIEMGRIYGMSDGELFRR 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I PG  P    G   A G  W   IV+E  +       ++GLG    ++ E      VV
Sbjct: 181 VIFPGALPSIFVGIRFALGIMWLTLIVAETIA------ASSGLGYMAMQAREFMLIDVVV 234

Query: 557 LGVLIMCCFVLALN 570
           L +LI        +
Sbjct: 235 LSILIYALLGKLAD 248



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+       L    L +    +  R     +I     F +      S+    +  
Sbjct: 48  LPAPSDVAFAGWKLLLSGELARNIWVSFWRASIGFLIGGSIGFAFGLANGLSQLSAKLTD 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L +++++P L  +   +++F           E A +F +     + +  +    +  +
Sbjct: 108 TTLQMVRNVPHLALIPLVILWFGID--------ESAKLFLVALGVFFPIYLNTLHGIRTV 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R + +S  + F  +  P ++P +   +  ++   W  ++ +E I        
Sbjct: 160 DPQLIEMGRIYGMSDGELFRRVIFPGALPSIFVGIRFALGIMWLTLIVAETIAASS---- 215

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G     A +   +  ++ ++L    +  L D   ++L R  + W   F+
Sbjct: 216 --GLGYMAMQAREFMLIDVVVLSILIYALLGKLADSASRVLERATLSWHPAFQ 266


>gi|121535614|ref|ZP_01667420.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121305784|gb|EAX46720.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 257

 Score =  106 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   F       +++   I++ RV+   +  +I  I +G+ +G  P + S I+P      
Sbjct: 47  LQTFFPLLLSGDLLYNTLISIQRVLWGFLAGAIPGIVLGMSMGLSPILRSAIEPMIAATY 106

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++        +        +  G  + ++ N +AG       + +VA +F
Sbjct: 107 PIPKLAIMPLILLIFGLGEASK----IFTIAIGVFYLVVINTMAGVLNIDKIYIDVAKNF 162

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +   ++  +  PG  P    G     G A    + +E+           G+G  I  +
Sbjct: 163 GASRKDFYLTVAFPGALPMIFAGLKLGMGMALILIVAAEL------SAAKAGVGWMIWRA 216

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     ++ + ++++       +  L
Sbjct: 217 YDMFDIEQMFVALIMLSVLGYLFSLLL 243



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 14/246 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI   +  L   +L   +  I     +  + P  I+      L    L      +  R+L
Sbjct: 12  RILSVLSPLTIILLWEFLARIKAIDTRLFSSPSQILQTFFPLLLSGDLLYNTLISIQRVL 71

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +   +   V       S  L   + P++     IP L  +   ++ F          
Sbjct: 72  WGFLAGAIPGIVLGMSMGLSPILRSAIEPMIAATYPIPKLAIMPLILLIFGLG------- 124

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E + IF I     + +  +    + NI +   +V+++F  S    +  +  P ++P + 
Sbjct: 125 -EASKIFTIAIGVFYLVVINTMAGVLNIDKIYIDVAKNFGASRKDFYLTVAFPGALPMIF 183

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + + M      +VA+E+           G+G  I  A    D+  +  A++ +  + +
Sbjct: 184 AGLKLGMGMALILIVAAEL------SAAKAGVGWMIWRAYDMFDIEQMFVALIMLSVLGY 237

Query: 254 LYDQLL 259
           L+  LL
Sbjct: 238 LFSLLL 243


>gi|296140821|ref|YP_003648064.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296028955|gb|ADG79725.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 286

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 11/225 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWI 408
            V         W  +   V      +  Y +W   + ++ R+   +  A I+   +G  +
Sbjct: 58  AVWDAAVRASTWHQVAPGVPREVLGEQNYFLWEHLVASLQRIFAGVGAAIILGPLLGFAM 117

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    I++ I+P+   L A P   +  L++        +       L+       I  + 
Sbjct: 118 GTSKTINTIIEPYLNFLRALPPLGYIGLLIVWFGIGDTSKIW----LLFLAAFPAIAIST 173

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           + G      D    A +      +  R +++P   P  + G   A G AW   + +E+ +
Sbjct: 174 VNGVQGVSVDQINAARALGANRLQTVRGVVVPATLPEVINGIRIAVGFAWTTVVAAELNN 233

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    G+G     + ++ + P  +  ++++    LAL+  +
Sbjct: 234 G------IPGIGGLAYLAGQQLNTPLTIACIIVIGVTALALDALI 272



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 85/199 (42%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+ + +  +++   +       S+ +  ++ P L+ ++++P LG++   +
Sbjct: 88  LWEHLVASLQRIFAGVGAAIILGPLLGFAMGTSKTINTIIEPYLNFLRALPPLGYIGLLI 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F      K        I+ +F +    +  S    +  +  D    +R+   +  Q  
Sbjct: 148 VWFGIGDTSK--------IWLLFLAAFPAIAISTVNGVQGVSVDQINAARALGANRLQTV 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P ++  + +++   W  VVA+E+         +PGIG    LA ++ +   
Sbjct: 200 RGVVVPATLPEVINGIRIAVGFAWTTVVAAEL------NNGIPGIGGLAYLAGQQLNTPL 253

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            +  ++ +       D L+
Sbjct: 254 TIACIIVIGVTALALDALI 272


>gi|253995480|ref|YP_003047544.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
 gi|253982159|gb|ACT47017.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera mobilis JLW8]
          Length = 259

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T    +  ++I   F  +   L A S     ++ P+   ++ +P+LG +  
Sbjct: 58  GELLINLVATLQTTVIGLLIGGFFGLMVGGLMAVSPFANKLIGPLYHTLRQVPLLGLIPL 117

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F N    K++   LAA +         +  + ++ +  I R   EV+   + +  Q
Sbjct: 118 IALWFGNDLFSKILIVSLAAFY--------PIVLNTFEGMRGIERKYVEVASVLKFNRLQ 169

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P + P ++   M +++  W   V SE++         PG+G  + +A +   +
Sbjct: 170 LLVHVLLPAATPSIMTGFMHALAFAWVSTVGSELLFSTG-----PGVGGLMLMAQESSRM 224

Query: 239 LAILYAMLTMLGVIFLYD 256
             ++ A++++     L +
Sbjct: 225 DIVIVAVVSIGLTGLLMN 242



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 9/196 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++     T+   V+ ++I     + VG  +   P  +  I P    L   P     
Sbjct: 56  QSGELLINLVATLQTTVIGLLIGGFFGLMVGGLMAVSPFANKLIGPLYHTLRQVPLLGLI 115

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+         N      L++     + I+ N   G       + EVAS       +  
Sbjct: 116 PLIALWFG----NDLFSKILIVSLAAFYPIVLNTFEGMRGIERKYVEVASVLKFNRLQLL 171

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            +++LP   P  +TG + A   AW +++ SE+           G+G  +  + E      
Sbjct: 172 VHVLLPAATPSIMTGFMHALAFAWVSTVGSELL-----FSTGPGVGGLMLMAQESSRMDI 226

Query: 555 VVLGVLIMCCFVLALN 570
           V++ V+ +    L +N
Sbjct: 227 VIVAVVSIGLTGLLMN 242


>gi|159906170|ref|YP_001549832.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
 gi|159887663|gb|ABX02600.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C6]
          Length = 277

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   ++++ +I+L+F      + A+S+ + M+L P+LD+MQ++P L +L   
Sbjct: 85  GLWDTSMITLSLIITSTLIALVFGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     IFA+  +            +  +  +L EV R+F  + WQ 
Sbjct: 145 VLFFG---IGEVPGVIATVIFAMPPA-----IKLTALGIEQVSGELIEVGRAFGGTSWQI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L 
Sbjct: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLA 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A + +  +  ++D++
Sbjct: 250 PALEAGIAVTFLAVIFDRI 268



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++  +   + W+++      FT   ++ ++ +G      IT+  ++   +IA +  IP+
Sbjct: 52  YLMIVLISILVWKTVNLKSVPFTAFFLIIIVMMGLWDTSMITLSLIITSTLIALVFGIPL 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +S  + P   ++   P+  +    V       +   +   +          
Sbjct: 112 GIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIF----AMPPA 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  EV  +F  T W+    I LP   P  + G   A   +++  +++
Sbjct: 168 IKLTALGIEQVSGELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                G       GLG  I    ++ S    +   + +    +  +R 
Sbjct: 228 GFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268


>gi|150397506|ref|YP_001327973.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029021|gb|ABR61138.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 281

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 94/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI I+  L    + +        +  + +      Q  + T   +L+A  +S+     
Sbjct: 54  LIVIAIVTALAWWFRRSIGIAVFTCLGMLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+   +   + PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 LGIAAARRAWIYSFMRPILDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + SF  + WQ    + +PF+MP ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     + L ++ +  + D+L 
Sbjct: 226 MVVIAALV-------GADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             V+  V     W      +  FT   +L ++  G       T+  V+    ++  + +P
Sbjct: 54  LIVIAIVTALAWWFRRSIGIAVFTCLGMLLIVNQGYWQETTETLALVLAATFVSMAVGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    R  I S ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 LGIAAARRAWIYSFMRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A SF  T W+  R + LP   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPALVEAAESFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +        L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVLRALNTVNIARGFESGLCIVILAIVLDRLF 272


>gi|320160159|ref|YP_004173383.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319994012|dbj|BAJ62783.1| putative ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 272

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 23/267 (8%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQET------TVPRDIVDIVPITLDVHSLPQ 63
            + R +  +        L++GI+      +           P D+       L   ++P+
Sbjct: 14  PLRRFVLQHRTGFFLLSLMLGILIWQGITLTGWLPAFILPGPFDVAARFWQALLDGTIPR 73

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   ++  + +  +   V   L AKS  L  +L P L   Q+IP++      +++F
Sbjct: 74  HFFATLQEVVPGLFLGSVSASVLGYLIAKSSLLERLLSPYLVASQAIPVVAIAPLLIIWF 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K++   L   F +          +    L  +P+ L ++ RS R   WQ  WYL
Sbjct: 134 GPGITSKILICALVVFFPVLV--------NTVVGLRAVPQSLHDLMRSLRAHPWQIVWYL 185

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP  +  + +   G    V+ +   VVG+ V    G+G  I +A  + D   +  
Sbjct: 186 EIPAAMPIFLGGLRV---GATLSVIGA---VVGEFVGADRGLGFLINVARGQYDHPLVFA 239

Query: 244 AMLTMLGVIFLYDQLLF---RPMIVWS 267
           A+LT++G+      L+    R  + W 
Sbjct: 240 AVLTLVGMALALYGLVLLAERRFLRWQ 266



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 85/274 (31%), Gaps = 27/274 (9%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
                      +     R  + L      ++    I +      +I+      DV    W
Sbjct: 6   AAPISISHPLRRFVLQHRTGFFLLSLMLGILIWQGITLTGWLPAFILP--GPFDVAARFW 63

Query: 382 LGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +          T+  VV  + + S+    +G  I     +   + P+     A P  
Sbjct: 64  QALLDGTIPRHFFATLQEVVPGLFLGSVSASVLGYLIAKSSLLERLLSPYLVASQAIPVV 123

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++        +  L  +L++ F     +L N + G  A P    ++  S     W
Sbjct: 124 AIAPLLIIWFGPGITSKILICALVVFF----PVLVNTVVGLRAVPQSLHDLMRSLRAHPW 179

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +   Y+ +P   P ++ G       +   ++V E            GLG  I  +  +  
Sbjct: 180 QIVWYLEIPAAMPIFLGGLRVGATLSVIGAVVGEFVG------ADRGLGFLINVARGQYD 233

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            P V   VL +    LAL   +     L   R  
Sbjct: 234 HPLVFAAVLTLVGMALALYGLV-----LLAERRF 262


>gi|298529284|ref|ZP_07016687.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510720|gb|EFI34623.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
          Length = 256

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV     +A ++ +P+G+  G    +   ++ F   + A P   + PL +     
Sbjct: 63  LASLSRVGSGFFLAVLLGLPLGVMSGRSRLVRVLLKDFVDAIRAVPGICWLPLALVWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+     + I  N +AG +  P+ +        +      R+++LP   
Sbjct: 123 GFKT----TVFLIFLAAFFPIYINSMAGVATVPSTYIRAGMMLGLGRLGLLRHVVLPASM 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + ++G     G ++   ++ E+           GLGA I ++   G    ++ G++++ 
Sbjct: 179 GHIMSGLRLGLGISFAYLVLGEM------TGVPNGLGALIMDARMMGRVDLIISGIVLIA 232

Query: 564 CFVLALNRFL 573
              L  +R L
Sbjct: 233 VTGLICDRLL 242



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 81/197 (41%), Gaps = 14/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    +  R+ S   +++L       ++ +SR + ++L   +D ++++P + +L   +V+
Sbjct: 60  QDLLASLSRVGSGFFLAVLLGLPLGVMSGRSRLVRVLLKDFVDAIRAVPGICWLPLALVW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F   +           +F IF +  + +  +    +  +P           L       +
Sbjct: 120 FGIGF--------KTTVFLIFLAAFFPIYINSMAGVATVPSTYIRAGMMLGLGRLGLLRH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P SM  ++  + + +   + ++V  EM  V +      G+G+ I  A     +  I+
Sbjct: 172 VVLPASMGHIMSGLRLGLGISFAYLVLGEMTGVPN------GLGALIMDARMMGRVDLII 225

Query: 243 YAMLTMLGVIFLYDQLL 259
             ++ +     + D+LL
Sbjct: 226 SGIVLIAVTGLICDRLL 242


>gi|309389667|gb|ADO77547.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 277

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  R+ V +  A    IP+G+  G+   + + I    +     P   ++ L+V     
Sbjct: 84  GASFKRLFVALFFAISTAIPLGLLSGYFSKVEAIIDSVVEFYRPLPPLAYYTLLVLWFGI 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L+       I    ++       DF   A S        +  I+LP   
Sbjct: 144 DDTSKQ----ILLFLAAFAPIYIACVSAVRKLNQDFVLSAKSLGAKPKDVFLKIVLPASL 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG  TA G A+   + SE+ +       T+G+G  + +++       + +G++IM 
Sbjct: 200 PEIFTGIRTAFGVAYTTLVSSEMVA------ATSGIGWMVLDASNFLKSDVIFVGIIIMG 253

Query: 564 CFVLALN 570
              + ++
Sbjct: 254 ITGVVID 260



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +  +   +  R+  A+  ++        L+    ++  ++  +++  + +P L + T  V
Sbjct: 79  IWMHLGASFKRLFVALFFAISTAIPLGLLSGYFSKVEAIIDSVVEFYRPLPPLAYYTLLV 138

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      K I   LAA   I+ + V         ++  + +D    ++S        F
Sbjct: 139 LWFGIDDTSKQILLFLAAFAPIYIACV--------SAVRKLNQDFVLSAKSLGAKPKDVF 190

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+P +   +  +    +  +V+SEM+          GIG  +  A        
Sbjct: 191 LKIVLPASLPEIFTGIRTAFGVAYTTLVSSEMVA------ATSGIGWMVLDASNFLKSDV 244

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           I   ++ M     + D   + L R +I W
Sbjct: 245 IFVGIIIMGITGVVIDAGLRYLERKIIFW 273


>gi|229552755|ref|ZP_04441480.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|229313860|gb|EEN79833.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
          Length = 283

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           +      +  ++   L    F +    A+   W +   I    T       +W       
Sbjct: 24  KRVKPSVNWLKILPWLVPLAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPK 83

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+++R      I   +   +G+  G    I + +    Q+L   P     PL++  +
Sbjct: 84  NIAISLYRATAGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILM 143

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  N   G      +  E+  ++ ++    +  ++ PG
Sbjct: 144 GIG----EPAKIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPG 199

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  S       T+GLG     + E      V+L +LI
Sbjct: 200 ALANILMGVRYALGVMWTTLIVAETIS------ATSGLGYMATNAQELMRMDTVLLCILI 253

Query: 562 MCCFVLALN 570
                   +
Sbjct: 254 YALLGKLSD 262



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 88/250 (35%), Gaps = 18/250 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           LAF++                     V    I+L     LP+  + +  R  +   I   
Sbjct: 42  LAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNIAISLYRATAGFAIGGS 101

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +    + +  +L   + ++++IP L  +   ++      P        A I  
Sbjct: 102 VGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGIGEP--------AKIAL 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ M  + YQ +     +L E+ R++ LS    F  +  P ++  ++  +  ++ 
Sbjct: 154 VAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPGALANILMGVRYALG 213

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          G+G     A +   +  +L  +L    +  L D +   
Sbjct: 214 VMWTTLIVAETIS------ATSGLGYMATNAQELMRMDTVLLCILIYALLGKLSDMIAKS 267

Query: 259 LFRPMIVWSN 268
           L R  + W  
Sbjct: 268 LERLFLGWRQ 277


>gi|162449593|ref|YP_001611960.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161160175|emb|CAN91480.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 286

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV+          + +GI +G    I   + P  + LA  PA  + PLV+     
Sbjct: 92  AISLGRVLGGFAAGGAAGLALGIAMGLSRRIEEHVHPLFKALAQVPALAWLPLVMMVAGI 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+   +   +  N   G    P  + EVA  F  +  +  R ++LP   
Sbjct: 152 G----ESLKLILIAQASLIPVAINTFEGIKNVPRSYIEVARVFRFSHAQLLRKVVLPAAV 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G       AW + +  E+ +       + G+G  I    +      V+  +L++ 
Sbjct: 208 PSIAVGIRYGLTQAWLSLVTVELLA------SSEGVGFLIVWGRQLFQLDVVLAAILVVG 261

Query: 564 CFVLALNRFL 573
              LAL++ L
Sbjct: 262 IVGLALDKGL 271



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 23/262 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE---------TTVPRDIVDIVPITLD 57
           LP   + R+       +A  LV     +L                  P  +V  +     
Sbjct: 24  LPAGGASRLLSRKVGNVAVGLVFPAALLLAWSYASQRELIPAQILPAPGLVVQTLTELAS 83

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L    + +  R+L                   SRR+   + P+   +  +P L +L 
Sbjct: 84  SGDLHTNIAISLGRVLGGFAAGGAAGLALGIAMGLSRRIEEHVHPLFKALAQVPALAWLP 143

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E   +  I  + +  +  + ++ + N+PR   EV+R FR S  
Sbjct: 144 LVMMVAGIG--------ESLKLILIAQASLIPVAINTFEGIKNVPRSYIEVARVFRFSHA 195

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++P +   +   ++  W  +V  E++   +      G+G  I    +   
Sbjct: 196 QLLRKVVLPAAVPSIAVGIRYGLTQAWLSLVTVELLASSE------GVGFLIVWGRQLFQ 249

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           L  +L A+L +  V    D+ L
Sbjct: 250 LDVVLAAILVVGIVGLALDKGL 271


>gi|327478891|gb|AEA82201.1| ABC-type transporter membrane permease component [Pseudomonas
           stutzeri DSM 4166]
          Length = 261

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 103/269 (38%), Gaps = 17/269 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + +R+ P    +    +  G + + L   +    P  ++      L    L  + + +  
Sbjct: 6   LGQRLAPWALPVALLAVWQGAVVLGLLSTRILPAPSAVLAAGWELLGSGELWTHLAISGW 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R      I      +   +   S     +L   + +++++P L  +   +++F       
Sbjct: 66  RAGVGFAIGGGIGLLLGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P
Sbjct: 122 ----ESAKVFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      ++ A+L    
Sbjct: 178 SILVGVRFALGFMWLTLIVAETISASA------GIGYLAMNAREFLQTDVVVLAILLYAL 231

Query: 251 VIFLYD---QLLFRPMIVWSNKFRLERTT 276
           +  L D   + L R  + W   ++ +   
Sbjct: 232 LGKLADVAARGLERVWLRWHPAYQAKAGA 260



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 79/239 (33%), Gaps = 16/239 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVV 391
           +   + L +    V  G  +     +               ++  G       I+ +R  
Sbjct: 9   RLAPWALPVALLAVWQGAVVLGLLSTRILPAPSAVLAAGWELLGSGELWTHLAISGWRAG 68

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V   I   I + +G   G        +    Q++   P     PLV+             
Sbjct: 69  VGFAIGGGIGLLLGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DESA 124

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G+  +R +ILPG  P  + G  
Sbjct: 125 KVFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVR 184

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S       + G+G     + E      VVL +L+        +
Sbjct: 185 FALGFMWLTLIVAETIS------ASAGIGYLAMNAREFLQTDVVVLAILLYALLGKLAD 237


>gi|294816087|ref|ZP_06774730.1| Putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328686|gb|EFG10329.1| Putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 296

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 89/267 (33%), Gaps = 17/267 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFT 372
                  G  R   P    +L      S+                 A + +  Y+V    
Sbjct: 16  GAPRDAPGAARRKGPTAGERLARAAGRSWRPAALLLVCCAAWWATAAAELVEPYLVPSPG 75

Query: 373 ------YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                   +  ++     +T +  ++   IA  + +   + +   P +   + P      
Sbjct: 76  ATFDVLTGEADHLWRHTWVTTYETLLGFGIAVAVGVLSAVVMVSSPTVEKTLYPVLLFAQ 135

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL V  +  + + P + +++L+     + ++ +++ G  A   +  +++++ 
Sbjct: 136 VIPKIAIAPLFVVWLG-FGIAPKILIAVLI---AFFPVVISMVTGLKAVDPEMLQLSATM 191

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+ +  I  P   P+  +G   A   A   ++V E            GLG  I ++
Sbjct: 192 GARPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVG------ADEGLGYVILQA 245

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 P +   +L+M    + L   +
Sbjct: 246 NGNLDTPMLFAALLVMSLIGVVLFVLV 272



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            VP        +T +   L ++   TT   L    I++    + A +   S  +   L P
Sbjct: 70  LVPSPGATFDVLTGEADHLWRHTWVTTYETLLGFGIAVAVGVLSAVVMVSSPTVEKTLYP 129

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L   Q IP +      VV+       K++ A L A F         +  SM   L  + 
Sbjct: 130 VLLFAQVIPKIAIAPLFVVWLGFGIAPKILIAVLIAFF--------PVVISMVTGLKAVD 181

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            ++ ++S +     WQ F  +  P S+P L   + ++++       A    VVG+ V   
Sbjct: 182 PEMLQLSATMGARPWQTFVKIRFPASLPHLFSGLKVAVTL------AVTGAVVGEFVGAD 235

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
            G+G  I  A    D   +  A+L M  +  +   L+    R ++ W 
Sbjct: 236 EGLGYVILQANGNLDTPMLFAALLVMSLIGVVLFVLVEAAERLLLPWH 283


>gi|113868219|ref|YP_726708.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526995|emb|CAJ93340.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 267

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 18/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        +  ++V  + +       +    P  +V           L ++   +T R 
Sbjct: 18  RALAPWIVPVLLIVVWQLASQNGWLSSRVLPAPLAVVQAAWELARSGDLWKHVGVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      +   L    R    +L   L ++++IP L  +   +++F         
Sbjct: 78  LVGFAIGGGLGLLLGLLTGTFRTAATLLDSSLQMVRNIPALALIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++   L E++RS+ LSGWQ +  + +P ++PG+
Sbjct: 132 --ETAKLFLVSLGVFFPVYLNTYHGIRSVDTGLVEMARSYGLSGWQLYREVILPGALPGI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      +L  +L    + 
Sbjct: 190 LVGVRFALGLMWVVLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLG 243

Query: 253 FLYDQL---LFRPMIVWSNKF 270
            L D L   L R  + W   +
Sbjct: 244 KLADWLSRGLERYWLRWHPGY 264



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 17/250 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVI 380
           P         + ++  +      VV  +A    W S   +                  + 
Sbjct: 8   PLRQGPRALARALAPWIVPVLLIVVWQLASQNGWLSSRVLPAPLAVVQAAWELARSGDLW 67

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               ++ +R +V   I   + + +G+  G     ++ +    Q++   PA    PLV+  
Sbjct: 68  KHVGVSTWRALVGFAIGGGLGLLLGLLTGTFRTAATLLDSSLQMVRNIPALALIPLVILW 127

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L+  G  + +  N   G  +      E+A S+ ++GW+ +R +ILP
Sbjct: 128 FGI----DETAKLFLVSLGVFFPVYLNTYHGIRSVDTGLVEMARSYGLSGWQLYREVILP 183

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  + G   A G  W   IV+E  S        +G+G     + E      V++G+L
Sbjct: 184 GALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGIL 237

Query: 561 IMCCFVLALN 570
           +        +
Sbjct: 238 LYALLGKLAD 247


>gi|150397782|ref|YP_001328249.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029297|gb|ABR61414.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 285

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 100/238 (42%), Gaps = 16/238 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L  +++++  + +     +  ++   +  ++     V  L     +T   ML A ++S+
Sbjct: 49  GLPWWLVILAFMALAWRSSRRWSLTLAVGALLLAVG-VLGLWDLTMQTLALMLMATIVSV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L AKSR +  + +P+LD+MQ++P   +L   ++ F           ++ AI 
Sbjct: 108 VIGVPMGILVAKSRVVRNITLPVLDVMQTMPSFVYLIPALMLFGLG--------KVPAIL 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     V  +       +  +  ++ E + +F  S  Q  + + +P + P ++  +  ++
Sbjct: 160 ATIIYAVPPLIRLTDLGIRQVDAEVVEAATAFGGSPGQILFGVEMPLATPTIMAGLNQTI 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+G  +   I+  D+   L A + ++ +  + D++
Sbjct: 220 MMALSMVVVASMI-------GARGLGEQVLNGIQTLDVGKGLEAGIGIVILAIVLDRI 270



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 91/273 (33%), Gaps = 15/273 (5%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--- 360
           +  +P+++ ++ L    G +        L+             +W  ++  +A+      
Sbjct: 9   SIRAPVNDFIQALVANYGWVFKAISGVILKAVLFIEWILRGLPWWLVILAFMALAWRSSR 68

Query: 361 -WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W     +        VL +  L   T+  +++  I++ +I +P+GI +     + +   
Sbjct: 69  RWSLTLAVGALLLAVGVLGLWDLTMQTLALMLMATIVSVVIGVPMGILVAKSRVVRNITL 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   ++   P+ V+    +           +   L  I      ++     G      + 
Sbjct: 129 PVLDVMQTMPSFVYLIPALMLFGLG----KVPAILATIIYAVPPLIRLTDLGIRQVDAEV 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A++F  +  +    + +P   P  + G       A +  +V+ +           GL
Sbjct: 185 VEAATAFGGSPGQILFGVEMPLATPTIMAGLNQTIMMALSMVVVASMIG-------ARGL 237

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G  +    +     + +   + +    + L+R 
Sbjct: 238 GEQVLNGIQTLDVGKGLEAGIGIVILAIVLDRI 270


>gi|118469712|ref|YP_889767.1| aliphatic sulfonates transport permease SsuC [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170999|gb|ABK71895.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 290

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 88/271 (32%), Gaps = 13/271 (4%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-- 358
            +    +P +     +  T   IR       +     + +   L +  + V  G  +   
Sbjct: 7   MTATAVAPEAAGPDLVDITAIHIRRKSLWALIPRPLRRLMGPALILLAWTVGSGTGLLNT 66

Query: 359 -IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +           +   D   +      +  RV+V  ++  +I + + +  G        
Sbjct: 67  DLFPPPTDVAATAWRLFDNGQLATHIGASAVRVLVGTVLGILIGVVLAVLAGLTRTGEDL 126

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +    Q+L A P     PL++  +            +L+  G    I  N  +G      
Sbjct: 127 LDWTMQILKAVPNFALTPLLIIWMGIGEG----PKIVLITTGVAIAIYINTYSGIRGVDR 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E+A +           +ILPG  P ++ G       AW + I +E+ +       T 
Sbjct: 183 QLVEMAQTLEAPRRTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMIN------TTE 236

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G+G  ++ +     F   +L ++I     L 
Sbjct: 237 GIGFLMSRAQTNLQFDVSLLVIVIYAIAGLL 267



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 14/212 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+        D   L  +   + +R+L   V+ +L   V A LA  +R    +L  
Sbjct: 70  PPPTDVAATAWRLFDNGQLATHIGASAVRVLVGTVLGILIGVVLAVLAGLTRTGEDLLDW 129

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + I++++P        +++       K        I  I T     +  + Y  +  + 
Sbjct: 130 TMQILKAVPNFALTPLLIIWMGIGEGPK--------IVLITTGVAIAIYINTYSGIRGVD 181

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R L E++++           + +P +MP  +  + + +S  W  ++ +EMI         
Sbjct: 182 RQLVEMAQTLEAPRRTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMI------NTT 235

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            GIG  ++ A         L  ++       L
Sbjct: 236 EGIGFLMSRAQTNLQFDVSLLVIVIYAIAGLL 267


>gi|262377103|ref|ZP_06070328.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
 gi|262307841|gb|EEY88979.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145]
          Length = 271

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 17/173 (9%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q++   PA    PLV+                L+  G  + I  N  
Sbjct: 102 SSKTASTLLDTTLQMIRNIPALALIPLVILWFGI----DESAKLFLVAIGVFFPIYINTY 157

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ +T W+ ++ IILPG  P  + G   + G  W   IV+E  S 
Sbjct: 158 HGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS- 216

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFLWH 575
                  +G+G     + E      V++G+L+            +AL RFL  
Sbjct: 217 -----AQSGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLAVALERFLLR 264



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 102/268 (38%), Gaps = 17/268 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
               + + + P +  +    +     +  L   +    P  +V      L    L  +  
Sbjct: 17  RGTILEQHLLPWLVPIFLIAVWQIASSTGLLESRILPAPSAVVLAFWNLLLSGELWTHVQ 76

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R +S +++      +   L   S+    +L   L ++++IP L  +   +++F   
Sbjct: 77  VSAGRAISGLLVGGGLGLLLGLLNGSSKTASTLLDTTLQMIRNIPALALIPLVILWFGID 136

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E A +F +     + +  + Y  + ++   L E+ +S+ L+ WQ +  + +P
Sbjct: 137 --------ESAKLFLVAIGVFFPIYINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEIILP 188

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP ++  +  S+   W  ++ +E I          GIG     A +      +L  +L
Sbjct: 189 GAMPSILVGLRFSLGLVWVLLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGIL 242

Query: 247 TMLGVIFLYDQL---LFRPMIVWSNKFR 271
               +  L D L   L R ++ W   ++
Sbjct: 243 LYALLGKLADVLAVALERFLLRWHAGYQ 270


>gi|311104594|ref|YP_003977447.1| binding-protein-dependent transporter inner membrane component
           family protein 19 [Achromobacter xylosoxidans A8]
 gi|310759283|gb|ADP14732.1| binding-protein-dependent transport system inner membrane component
           family protein 19 [Achromobacter xylosoxidans A8]
          Length = 264

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 10/174 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++R     ++A+ + IP+G+ +G+   +   + PF   L       + P        
Sbjct: 72  GASLYRFACGFLLAAAVGIPLGLLMGWYRWLDDVVSPFFDALRFVAPIAWVPFAGLWFGT 131

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               P    +L++  G     L +   GA        E + +   +G R    ++LP   
Sbjct: 132 GIGGP----TLIIFAGAFPPCLISAYRGAKFVDTRLLEASRTLGASGPRIVAEVLLPASL 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           P  + G   + G  W + + +E+   G+      G+G  + +     +   V+ 
Sbjct: 188 PSILAGLRVSAGIGWQSLVGAELIVVGN------GIGYMMVQGQLNVATNIVMA 235



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 14/174 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   +  R     +++         L    R L  V+ P  D ++ +  + ++ F
Sbjct: 65  ATLWTHLGASLYRFACGFLLAAAVGIPLGLLMGWYRWLDDVVSPFFDALRFVAPIAWVPF 124

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F     G  +         IF         S Y+    +   L E SR+   SG +
Sbjct: 125 AGLWFGTGIGGPTL--------IIFAGAFPPCLISAYRGAKFVDTRLLEASRTLGASGPR 176

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
               + +P S+P ++  + +S   GW  +V +E+IVVG+      GIG  +   
Sbjct: 177 IVAEVLLPASLPSILAGLRVSAGIGWQSLVGAELIVVGN------GIGYMMVQG 224


>gi|199599403|ref|ZP_03212798.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lactobacillus rhamnosus HN001]
 gi|199589694|gb|EDY97805.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lactobacillus rhamnosus HN001]
          Length = 272

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383
           +      +  ++   L    F +    A+   W +   I    T       +W       
Sbjct: 13  KRVKPSVNWLKILPWLVPLVFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPK 72

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              I+++R      I   +   +G+  G    I + +    Q+L   P     PL++  +
Sbjct: 73  NIAISLYRATAGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILM 132

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        L+  G  + +  N   G      +  E+  ++ ++    +  ++ PG
Sbjct: 133 GIG----EPAKIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPG 188

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                + G   A G  W   IV+E  S       T+GLG     + E      V+L +LI
Sbjct: 189 ALANILMGVRYALGAMWTTLIVAETIS------ATSGLGYMATNAQEFMRMDTVLLCILI 242

Query: 562 MCCFVLALN 570
                   +
Sbjct: 243 YALLGKLSD 251



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 93/266 (34%), Gaps = 17/266 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           + P     +I P +  L+  +     ++           P  ++           LP+  
Sbjct: 15  VKPSVNWLKILPWLVPLVFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNI 74

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + +  R  +   I     F    +    + +  +L   + ++++IP L  +   ++    
Sbjct: 75  AISLYRATAGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGI 134

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P        A I  +    ++ M  + YQ +     +L E+ R++ LS    F  +  
Sbjct: 135 GEP--------AKIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVF 186

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  ++   W  ++ +E I          G+G     A +   +  +L  +
Sbjct: 187 PGALANILMGVRYALGAMWTTLIVAETIS------ATSGLGYMATNAQEFMRMDTVLLCI 240

Query: 246 LTMLGVIFLYDQL---LFRPMIVWSN 268
           L    +  L D +   L R  + W  
Sbjct: 241 LIYALLGKLSDMIAKSLERLFLSWRQ 266


>gi|27366464|ref|NP_761991.1| choline ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|320158303|ref|YP_004190681.1| L-proline glycine betaine ABC transport system permease ProW
           [Vibrio vulnificus MO6-24/O]
 gi|27358030|gb|AAO06981.1| choline ABC transporter, permease protein [Vibrio vulnificus CMCP6]
 gi|319933615|gb|ADV88478.1| L-proline glycine betaine ABC transport system permease protein
           ProW [Vibrio vulnificus MO6-24/O]
          Length = 266

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           I    ++   +  +      V +  +T+      Q    T + + +A  IS+L       
Sbjct: 43  IIATALIAWFLHRSIGLVLFVVLALLTILNLGYWQEMLETFVLVFAATTISVLIGVPIGI 102

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +AA  R +  +L PILD+MQ++P   +L  T+V F     G V G     IFAI      
Sbjct: 103 MAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFAIAAP--- 156

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                 Y  +  +P +L E  ++F  +  +    + +P ++P ++  +   +      VV
Sbjct: 157 --IRLTYLGITKVPEELVEAGKAFGANRLKLLLKVELPAALPSIMAGITQCIMLSLSMVV 214

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + ++          G+G  +  A+   ++     A L ++ V  + D+L
Sbjct: 215 IAALV-------GADGLGKPVVRALNTVNIAQGFEAGLAIVLVAIILDRL 257



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 18/227 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I WF       +     ++  I+N   +Q++L    L       V     I+ +I +P+G
Sbjct: 49  IAWFLHRSIGLVLFVVLALLTILNLGYWQEMLETFVL-------VFAATTISVLIGVPIG 101

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I    R  I + ++P   L+   P  V+    +  +  + L     L   +IF     I 
Sbjct: 102 IMAAHRRWIYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIR 158

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G +  P +  E   +F     +    + LP   P  + G       + +  +++ 
Sbjct: 159 L-TYLGITKVPEELVEAGKAFGANRLKLLLKVELPAALPSIMAGITQCIMLSLSMVVIAA 217

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +           GLG  +  +    +  +     L +    + L+R 
Sbjct: 218 LVG-------ADGLGKPVVRALNTVNIAQGFEAGLAIVLVAIILDRL 257


>gi|114764680|ref|ZP_01443865.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601]
 gi|114542880|gb|EAU45901.1| ABC transporter permease protein [Roseovarius sp. HTCC2601]
          Length = 277

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +++L I+      G+     + +   + +          +      ++ R  V   I + 
Sbjct: 41  AFILGIWALVGASGMVKEAIFPAPWSVWSATVEMWQNGTLQTDLAKSLGRAGVGFGIGAT 100

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + +G+  G    + + + PF  LL   PA    P+ +        +    +S  +   
Sbjct: 101 LGVALGLLTGRVALVRTLLNPFLNLLRPIPAIALVPVAIVWFGIGEGSKYFVVSYTVFL- 159

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T W   FN   G    P  +   + S   +  R +  ++LP   P+   G       A+ 
Sbjct: 160 TVW---FNTHHGMEYVPETYLRASRSLGASRMREFLTVVLPAAAPHIFAGIRLGVALAFL 216

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + + +E+         ++G+G  + E+ +      +   ++I+       +  +
Sbjct: 217 SLVAAEL------SGASSGIGFRLQEARQYVRTDRMFSLLIILGVLGAVADLIV 264



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 20/260 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET------TVPRDIVDIVPITLDVH 59
           I P       +     L        +    L G            P  +           
Sbjct: 19  IAPFLSQGAKWGAKAGLPLISFAFILGIWALVGASGMVKEAIFPAPWSVWSATVEMWQNG 78

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L    +++  R      I          L  +   +  +L P L++++ IP +  +   
Sbjct: 79  TLQTDLAKSLGRAGVGFGIGATLGVALGLLTGRVALVRTLLNPFLNLLRPIPAIALVPVA 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V+F      K         F +  +    + F+ +  +  +P      SRS   S  ++
Sbjct: 139 IVWFGIGEGSKY--------FVVSYTVFLTVWFNTHHGMEYVPETYLRASRSLGASRMRE 190

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P + P +   + + ++  +  +VA+E+           GIG  +  A +     
Sbjct: 191 FLTVVLPAAAPHIFAGIRLGVALAFLSLVAAEL------SGASSGIGFRLQEARQYVRTD 244

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            +   ++ +  +  + D ++
Sbjct: 245 RMFSLLIILGVLGAVADLIV 264


>gi|298489302|ref|ZP_07007318.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156201|gb|EFH97305.1| Alkanesulfonates transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 265

 Score =  106 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 17/240 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390
            R++          V  +++   W S   +       +    +           I+ +R 
Sbjct: 11  HRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRA 70

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +   I   I + +G   G        +    Q++   P     PLV+            
Sbjct: 71  GIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DET 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+  GT + I  N   G         E++ S+ ++G+  +R++ILPG  P  + G 
Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGV 186

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G  W   IV+E  S       ++G+G     + E      VV  +++        +
Sbjct: 187 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVQAIVLYAVLGKLAD 240



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 18/254 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  +         +    P  +++     +    +  + + +  R      I   
Sbjct: 20  VLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 80  IGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ETAKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + NI   L E+SRS+ LSG+  F ++ +P +MP ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDIVVQAIVLYAVLGKLADLAARG 245

Query: 259 LFRPMIVWSNKFRL 272
           L R  + W   +++
Sbjct: 246 LERVCLRWHPAYQV 259


>gi|159043985|ref|YP_001532779.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911745|gb|ABV93178.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 513

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI  + +LL  +                + +    + A  T   + +A  +S++     
Sbjct: 291 IVIASLIVLLTWLTAGLRTAIYSSAFLAYMGLLGFWEAAMTTLALLGTAACLSIVIGIPL 350

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              AA+  R    + PI+D MQ++P   F+   + +F    P        AA+       
Sbjct: 351 GMFAARRPRFYAFIQPIMDFMQTMPAFVFMVPVIAFFGVGKP--------AAVIVTMIFG 402

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       L  +P  + E + SF  + W     + +P + P +   +  ++      
Sbjct: 403 GTPVVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAGINQTIMLSLAM 462

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VV + +I          G+G  +  A++  ++   + A  ++L    + D+++
Sbjct: 463 VVVASLI-------GAKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 508



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 11/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    +V    +    ++  Y      Y  +L        T+  +     ++ +I IP
Sbjct: 290 WIVIASLIVLLTWLTAGLRTAIYSSAFLAYMGLLGFWEAAMTTLALLGTAACLSIVIGIP 349

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G++   RP   + IQP    +   PA VF    V  ++++ +     + + MIFG    
Sbjct: 350 LGMFAARRPRFYAFIQPIMDFMQTMPAFVFM---VPVIAFFGVGKPAAVIVTMIFGGT-P 405

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   + G    P   +E A SF    W     + LP   P    G       +    +V
Sbjct: 406 VVRLTVLGLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAGINQTIMLSLAMVVV 465

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  + E+ +  +  + +L    +    + L+R +
Sbjct: 466 ASLIG-------AKGLGEDVLEALQYANVGQGILAGFSILFCAMILDRIV 508


>gi|319782378|ref|YP_004141854.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168266|gb|ADV11804.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 282

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 11/240 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P     +   R    I      +   + +      +   +W     G+   I   S G +
Sbjct: 11  PARPTKQARRRRSSGIGVPIARSRFLVIAVAVFVGLGLAWWAATGLGLVKPIFLPSPGSV 70

Query: 368 VNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       +WL    +M+R+ +  +IAS + IP+G+ IG      + I+P    + 
Sbjct: 71  AMQIAKLAADGTLWLDLKASMYRISIGFLIASALSIPIGVLIGSFRSWEAAIEPLVDFIR 130

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P   F PL +               L++  GT +  +  ++      P DF  +  + 
Sbjct: 131 YMPVVAFVPLSILWAGTGDSQK----FLIIFIGTFFQQVLMIMDNVKRVPADFIGLGRTL 186

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +   +    I++P   P        + G AW   +++E+ +       T+GLG  I  S
Sbjct: 187 GLPDRKILTRIVVPSALPGIWDTLRISLGWAWTWLVLAELVA------ATSGLGYRITVS 240



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 79/212 (37%), Gaps = 19/212 (8%)

Query: 23  LAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +A  + +G+      G+          P  +   +       +L      +  R+    +
Sbjct: 40  VAVFVGLGLAWWAATGLGLVKPIFLPSPGSVAMQIAKLAADGTLWLDLKASMYRISIGFL 99

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+   +     L    R     + P++D ++ +P++ F+  ++++       K +     
Sbjct: 100 IASALSIPIGVLIGSFRSWEAAIEPLVDFIRYMPVVAFVPLSILWAGTGDSQKFL----- 154

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               IF    +     +  ++  +P D   + R+  L   +    + VP ++PG+   + 
Sbjct: 155 ---IIFIGTFFQQVLMIMDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLR 211

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +S+   W ++V +E++          G+G  I
Sbjct: 212 ISLGWAWTWLVLAELVA------ATSGLGYRI 237


>gi|83310954|ref|YP_421218.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Magnetospirillum magneticum AMB-1]
 gi|82945795|dbj|BAE50659.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Magnetospirillum magneticum AMB-1]
          Length = 256

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 84/264 (31%), Gaps = 25/264 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------- 384
           +   + +R +          +      +A   +   V   +  +V  V+           
Sbjct: 1   MSSAAIRRAARFSSALSGLGLLVAFWALAAAGLDNPVLLPSPAEVAGVLGEVIGSGAFHR 60

Query: 385 ---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++ RV+   ++AS + +P+ + +     +   + P   LL   P   + PL +   
Sbjct: 61  DLGASLRRVLGGYVLASGLAVPLALVMAAWGPLRQSLLPVVSLLRPIPPIAWIPLAILWF 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        +      + I  N  AG  A    + + A     T       + LP 
Sbjct: 121 GLGDA----PSFFITAIAAFFPIFLNAFAGGLAVGGRYLDAARCLGATRLALLLEVRLPA 176

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG     G +W A + +E+ +        +GLG  I  +        V++G++ 
Sbjct: 177 ALPMIATGLRIGLGQSWMAVVTAELIA------AQSGLGYMIQANRLTLQTAHVLVGMVT 230

Query: 562 MCCFVLALNRFLWHPLYLYGTRCL 585
           +      +    W   +    R L
Sbjct: 231 IGTLGALMT---WA--FTLAERRL 249



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 88/259 (33%), Gaps = 18/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  L   V    +    L        P ++  ++   +   +  +    +  R+L
Sbjct: 11  RFSSALSGLGLLVAFWALAAAGLDNPVLLPSPAEVAGVLGEVIGSGAFHRDLGASLRRVL 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              V++       A + A    L   L+P++ +++ IP + ++   +++F          
Sbjct: 71  GGYVLASGLAVPLALVMAAWGPLRQSLLPVVSLLRPIPPIAWIPLAILWFGLGDAPSFFI 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +AA F IF         + +     +     + +R    +       + +P ++P + 
Sbjct: 131 TAIAAFFPIF--------LNAFAGGLAVGGRYLDAARCLGATRLALLLEVRLPAALPMIA 182

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + + +   W  VV +E+I          G+G  I           +L  M+T+  +  
Sbjct: 183 TGLRIGLGQSWMAVVTAELIA------AQSGLGYMIQANRLTLQTAHVLVGMVTIGTLGA 236

Query: 254 LYDQLLF----RPMIVWSN 268
           L          R ++ W  
Sbjct: 237 LMTWAFTLAERRLLVPWQE 255


>gi|188579679|ref|YP_001923124.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343177|gb|ACB78589.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 279

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 93/240 (38%), Gaps = 17/240 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +   L   +    P  I   +        L  +   T +R+            +   L A
Sbjct: 48  VAAGLASGRLLPPPSRIGAALWTLAASGELWTHVEATLIRVGLGFAFGASAGILAGALTA 107

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
               L  ++ P L  ++++P L ++   +++F  L   KV    +   F ++        
Sbjct: 108 TLPPLRWLVDPSLQALRAVPSLAWVPLFILWFGILETPKVALIAVGVFFPVY-------- 159

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA+E
Sbjct: 160 IGVAGAIASVDRKLVEVGRIFRLSKLALARRILLPAVLPATLTALRTGLGLGFLFVVAAE 219

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
           ++   +      G+G  +    +      IL A+++   V    D +L    RP++ W +
Sbjct: 220 LMGASE------GLGYLLLDGQQFSKPDQILAAIISFAVVGKAADAVLVALSRPLVRWQD 273



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV +     +   I  G      P +   + P  Q L A P+  + PL +      
Sbjct: 83  ATLIRVGLGFAFGASAGILAGALTATLPPLRWLVDPSLQALRAVPSLAWVPLFILWFGIL 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V    ++      EV   F ++     R I+LP + P
Sbjct: 143 ETPK----VALIAVGVFFPVYIGVAGAIASVDRKLVEVGRIFRLSKLALARRILLPAVLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T   T  G  +   + +E+         + GLG  + +  +     +++  ++    
Sbjct: 199 ATLTALRTGLGLGFLFVVAAELMG------ASEGLGYLLLDGQQFSKPDQILAAIISFAV 252

Query: 565 FVLALN---RFLWHPLYLY 580
              A +     L  PL  +
Sbjct: 253 VGKAADAVLVALSRPLVRW 271


>gi|126440157|ref|YP_001058858.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126219650|gb|ABN83156.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
          Length = 269

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V   L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 24  VPLALVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 83

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 84  GGVGLVLGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 139

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 140 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 199

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 200 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 248



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA VL             +    P  +V      ++   +      +T R L    I   
Sbjct: 26  LALVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGG 85

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V       S+   + L   + ++++IP L  +   +++F           E A +F 
Sbjct: 86  VGLVLGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFL 137

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++ 
Sbjct: 138 VALGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALG 197

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D L   
Sbjct: 198 LMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKW 251

Query: 259 LFRPMIVW 266
           L R  + W
Sbjct: 252 LERATLRW 259


>gi|95928647|ref|ZP_01311394.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
 gi|95135437|gb|EAT17089.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
          Length = 279

 Score =  106 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   ++ +++   L       L+ +S R  M+L P LD MQ+ P   +L   V+
Sbjct: 91  WEATMTTLSMVVCSVLFCGLVGIPLGILSGRSDRFEMLLRPCLDAMQTTPAFVYLVPVVM 150

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FA+       +       +  +  +L E + +F  + WQ   
Sbjct: 151 LFS---IGPVSGILATIVFAMP-----PIIRLTNLGIRQVHPELVEAAIAFGSTPWQVLC 202

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++P ++  +  ++      VV + MI  G       G+G  +   +   ++   
Sbjct: 203 KVQFPLALPSIMAGLNQTIMMALSMVVIAAMIGAG-------GLGDPVVQGLNTLEIGLA 255

Query: 242 LYAMLTMLGVIFLYDQL 258
               L+++ +  + D++
Sbjct: 256 TIGGLSIVLLAMILDRI 272



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIII 396
           ++ +     VV      +AW+  G  V  FT   +  + +LG       T+  VV  ++ 
Sbjct: 48  WLFNSLPPIVVIVFLALLAWRYAGKRVTLFTVSSLFLIGFLGQWEATMTTLSMVVCSVLF 107

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             ++ IP+GI  G        ++P    +   PA V+   VV   S   ++  L   +  
Sbjct: 108 CGLVGIPLGILSGRSDRFEMLLRPCLDAMQTTPAFVYLVPVVMLFSIGPVSGILATIVF- 166

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  I+     G      +  E A +F  T W+    +  P   P  + G       
Sbjct: 167 ---AMPPIIRLTNLGIRQVHPELVEAAIAFGSTPWQVLCKVQFPLALPSIMAGLNQTIMM 223

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A +  +++ +   G       GLG  + +           +G L +    + L+R 
Sbjct: 224 ALSMVVIAAMIGAG-------GLGDPVVQGLNTLEIGLATIGGLSIVLLAMILDRI 272


>gi|170732889|ref|YP_001764836.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169816131|gb|ACA90714.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 270

 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 17/248 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------- 384
           +   + + V+  L      VV  V     W S   +          + +           
Sbjct: 12  VAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVK 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++V  +         +    P  +V      +    +      +T R 
Sbjct: 18  RGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 78  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 132 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 190 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   + R  + W   ++
Sbjct: 244 KLADVLAKWIERVTLRWHPAYQ 265


>gi|300819177|ref|ZP_07099378.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300902903|ref|ZP_07120848.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300925385|ref|ZP_07141271.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929633|ref|ZP_07145094.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300949697|ref|ZP_07163678.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300955413|ref|ZP_07167789.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301302450|ref|ZP_07208581.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301326652|ref|ZP_07219982.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301643457|ref|ZP_07243505.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309795077|ref|ZP_07689497.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331641462|ref|ZP_08342597.1| putative transport system permease protein [Escherichia coli H736]
 gi|300317702|gb|EFJ67486.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405045|gb|EFJ88583.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300418514|gb|EFK01825.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300450912|gb|EFK14532.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462410|gb|EFK25903.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300528196|gb|EFK49258.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300842289|gb|EFK70049.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846697|gb|EFK74457.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301078171|gb|EFK92977.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|308121381|gb|EFO58643.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315257980|gb|EFU37948.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|331038260|gb|EGI10480.1| putative transport system permease protein [Escherichia coli H736]
          Length = 278

 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 29  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 88

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 89  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 140

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 141 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 200

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 201 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 254

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 255 VSAQLLERLWLRWNPAYHLKEAT 277



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 26  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 85

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 86  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 141

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 142 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 202 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 255

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 256 SAQLLERLWLRWNPAYHLKE 275


>gi|126665899|ref|ZP_01736880.1| glycine betaine/proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
 gi|126629833|gb|EBA00450.1| glycine betaine/proline ABC transporter, permease protein
           [Marinobacter sp. ELB17]
          Length = 318

 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           YA +T   +     I +L         +++  +  + +P+LD++Q++P   +L   +  F
Sbjct: 124 YAMQTLAIIFVCAFICVLLGVPIGIAMSRNNMMQRLTIPVLDMLQTLPPFVYLIPLIFLF 183

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                            AI    +  +       +  +  D+ E + +F ++  QK + +
Sbjct: 184 SVTESKLYG-------IAIILYAIVPVIRMTNLGIRLVDPDVIEAANAFGMTSRQKLYKV 236

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L 
Sbjct: 237 QIPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLQGIRNLELGVGLV 289

Query: 244 AMLTMLGVIFLYDQL 258
           A L ++ +  + D++
Sbjct: 290 AGLGIVILAVILDRV 304



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 78/232 (33%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +    +   + +  +W+ +G++         +        T+  + V   I  +
Sbjct: 82  TTPWWIVIPILLAVVLLVTKSWKLVGFVAGSLCLLAFIDYYVYAMQTLAIIFVCAFICVL 141

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +     +     P   +L   P  V+    +  +  + +  +    + +I  
Sbjct: 142 LGVPIGIAMSRNNMMQRLTIPVLDMLQTLPPFVYL---IPLIFLFSVTESKLYGIAIILY 198

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A++F +T  +    + +P   P  + G       +  
Sbjct: 199 AIVPVIRMTNLGIRLVDPDVIEAANAFGMTSRQKLYKVQIPLALPNIMAGVNQTIMMSLA 258

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  + +          ++  L +    + L+R
Sbjct: 259 MVVIASLVS-------APGLGVLVLQGIRNLELGVGLVAGLGIVILAVILDR 303


>gi|241763376|ref|ZP_04761431.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241367418|gb|EER61729.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 294

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 11/250 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +S       + L       P  +  L  +  +   L ++      G            
Sbjct: 19  AGMSAASPAPAQRLATPTAVLPTLWRGLERSACILLFLALWELLPRAGWVSPAFLSPPSD 78

Query: 367 IVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +V    T  D   +      ++ R +  +++A    + +G+ +G      + + P  QL 
Sbjct: 79  VVRAIATLVDNGQLWKHVTASLQRSLAGLLLAIASGVGLGLLMGAVQRFEAFVDPLLQLF 138

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
               A   FP+ +  +     +       ++ +   W +L N I G           A S
Sbjct: 139 RQVSAFALFPVFLLFLGIGEASK----VAIIFWAAFWPVLLNTIGGVKQVDKLLVHSALS 194

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +    +  ++LP   P   TG   A   +  A + +E+           GLG     
Sbjct: 195 MGASRSYIFFRVVLPAASPSIFTGIRLAGAYSITALVAAEMIG------AHAGLGFLTLN 248

Query: 546 STEKGSFPEV 555
           + E    P +
Sbjct: 249 AQEIFQIPTM 258



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 76/200 (38%), Gaps = 14/200 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P D+V  +   +D   L ++ + +  R L+ +++++        L    +R    + 
Sbjct: 73  LSPPSDVVRAIATLVDNGQLWKHVTASLQRSLAGLLLAIASGVGLGLLMGAVQRFEAFVD 132

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L + + +         +++            E + +  IF +  W +  +    +  +
Sbjct: 133 PLLQLFRQVSAFALFPVFLLFLGIG--------EASKVAIIFWAAFWPVLLNTIGGVKQV 184

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L   + S   S    F+ + +P + P +   + ++ +     +VA+EMI        
Sbjct: 185 DKLLVHSALSMGASRSYIFFRVVLPAASPSIFTGIRLAGAYSITALVAAEMIG------A 238

Query: 222 LPGIGSYIALAIKEQDLLAI 241
             G+G     A +   +  +
Sbjct: 239 HAGLGFLTLNAQEIFQIPTM 258


>gi|269125635|ref|YP_003299005.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268310593|gb|ACY96967.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 284

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 12/252 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           T    RF FP   +   +   +  + +      +    +  A  S+     H T    L 
Sbjct: 23  TAPPRRFRFPYRTVSWATPFALILLWEAAARAGLLSAQVLPAPSSVVATAVHLTASGELP 82

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              L   ++ R  +  +I + I + +G+ +G      + I    Q++ A P     PLV+
Sbjct: 83  QHLLA--SLRRAALGFVIGAAIGLTLGVAVGLSRIAEAFIDRSVQMIRAIPFLAILPLVI 140

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           L+  G+ + +  N + G         E+  +  ++     R +I
Sbjct: 141 VWFGVGEAGK----IFLIAKGSAFPLYLNTVLGIRQIDTKLLEMGQTVGLSRAARIRTLI 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  + G   +   AW A +++E            G+G     + E      +VL 
Sbjct: 197 LPGALPSILGGLRMSLTYAWLALVIAETVG------AMAGIGFLATNAREFLQVDVIVLV 250

Query: 559 VLIMCCFVLALN 570
           V++     +A +
Sbjct: 251 VVLYAGIGIACD 262



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 14/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +L        L   Q    P  +V           LPQ+   +  R     VI   
Sbjct: 42  FALILLWEAAARAGLLSAQVLPAPSSVVATAVHLTASGELPQHLLASLRRAALGFVIGAA 101

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SR     +   + ++++IP L  L   +V+F     GK        IF 
Sbjct: 102 IGLTLGVAVGLSRIAEAFIDRSVQMIRAIPFLAILPLVIVWFGVGEAGK--------IFL 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    +  I   L E+ ++  LS   +   L +P ++P ++  + MS++
Sbjct: 154 IAKGSAFPLYLNTVLGIRQIDTKLLEMGQTVGLSRAARIRTLILPGALPSILGGLRMSLT 213

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W  +V +E +        + GIG     A +   +  I+  ++   G+    D
Sbjct: 214 YAWLALVIAETVG------AMAGIGFLATNAREFLQVDVIVLVVVLYAGIGIACD 262


>gi|254449487|ref|ZP_05062924.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198263893|gb|EDY88163.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 345

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 81/195 (41%), Gaps = 14/195 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y  +T   +    +  ++         A+S R+  +++PILD++Q++P   +L   +  F
Sbjct: 151 YTMQTLAIIFVCALTCVVLGIPIGIAMARSDRVQRIMIPILDMLQTLPPFVYLIPLIFLF 210

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
               P            AI    +  +       +  +  D+ E + +F ++  QK   +
Sbjct: 211 SVTEPKLYG-------IAIILYAIVPVVRLTDLGIRLVDPDVTEAADAFGMTKRQKLLNV 263

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L 
Sbjct: 264 QIPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLRGIRSLELGVGLL 316

Query: 244 AMLTMLGVIFLYDQL 258
           + L ++ +  + D++
Sbjct: 317 SGLGIVLLAVILDRV 331



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 73/229 (31%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              +    ++    +    Q +  +   F +   +        T+  + V  +   ++ I
Sbjct: 112 WFIMIPLLMLVAWVVSRQLQLVALVAVCFGFLGFVDYYSYTMQTLAIIFVCALTCVVLGI 171

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +     +   + P   +L   P  V+    +  +  + +       + +I     
Sbjct: 172 PIGIAMARSDRVQRIMIPILDMLQTLPPFVYL---IPLIFLFSVTEPKLYGIAIILYAIV 228

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      D  E A +F +T  +    + +P   P  + G       +    +
Sbjct: 229 PVVRLTDLGIRLVDPDVTEAADAFGMTKRQKLLNVQIPLALPNIMAGVNQTIMMSLAMVV 288

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           ++ + S         GLG  +            +L  L +    + L+R
Sbjct: 289 IASLVS-------APGLGVLVLRGIRSLELGVGLLSGLGIVLLAVILDR 330


>gi|167587279|ref|ZP_02379667.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia ubonensis Bu]
          Length = 269

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 12/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
               +  +   V   L I W     +  ++  +  + +  +   ++      +     ++
Sbjct: 13  ARAWRGAAPWLVPLALLIAWEAGARIGWLSTRVLPEPVAVVRAAWSLVASGELWANVKVS 72

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R ++   +   + + +G+  G        +    Q++   PA    PLV+        
Sbjct: 73  TWRALLGFALGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI--- 129

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P  
Sbjct: 130 -DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 188

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+     
Sbjct: 189 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 242

Query: 567 LALNRF 572
              +  
Sbjct: 243 KVADVL 248



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 94/262 (35%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++       +     +    P  +V      +    L      +T R 
Sbjct: 17  RGAAPWLVPLALLIAWEAGARIGWLSTRVLPEPVAVVRAAWSLVASGELWANVKVSTWRA 76

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    +              S+   + L   + ++++IP L  +   +++F         
Sbjct: 77  LLGFALGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 131 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 189 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 242

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            + D L   L R  + W   ++
Sbjct: 243 KVADVLAKWLERATLRWHPAYQ 264


>gi|108799550|ref|YP_639747.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119868663|ref|YP_938615.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126435204|ref|YP_001070895.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108769969|gb|ABG08691.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119694752|gb|ABL91825.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126235004|gb|ABN98404.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 289

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 79/249 (31%), Gaps = 15/249 (6%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-----LYV 379
                 + ++    R +    +       G A G+    +     H             +
Sbjct: 25  RRRRGVWARIPRTVRRTMSPVLILAAWTIGSATGLLNPDLFPPPGHVATTAWQLLTDGQL 84

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 +  RV+   ++  +  + + +  G        +    Q+L A P     PL++ 
Sbjct: 85  ALHVGTSATRVLTGTVLGIVFGVLLAVLAGLTRTGEDLLDWTMQILKAVPNFALTPLLII 144

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +            +L+  G    I  N  +G         E+A +           +IL
Sbjct: 145 WMGIGEGPK----IVLITLGVAIAIYINTYSGIRGVDQQLVEMAQTLEARRITLITQVIL 200

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P ++ G       AW + I +E+ +       T G+G  ++ +     F   +L +
Sbjct: 201 PGAMPNFLVGLRLGLSSAWLSLIFAEMIN------TTEGIGFLMSRAQTNLQFDVSLLVI 254

Query: 560 LIMCCFVLA 568
           +I     LA
Sbjct: 255 VIYAVAGLA 263



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 78/212 (36%), Gaps = 14/212 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +       L    L  +   +  R+L+  V+ ++F  + A LA  +R    +L  
Sbjct: 66  PPPGHVATTAWQLLTDGQLALHVGTSATRVLTGTVLGIVFGVLLAVLAGLTRTGEDLLDW 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + I++++P        +++       K++   L    AI+         + Y  +  + 
Sbjct: 126 TMQILKAVPNFALTPLLIIWMGIGEGPKIVLITLGVAIAIY--------INTYSGIRGVD 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L E++++           + +P +MP  +  + + +S  W  ++ +EMI         
Sbjct: 178 QQLVEMAQTLEARRITLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMI------NTT 231

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            GIG  ++ A         L  ++        
Sbjct: 232 EGIGFLMSRAQTNLQFDVSLLVIVIYAVAGLA 263


>gi|221211106|ref|ZP_03584085.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221168467|gb|EEE00935.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 321

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 130 SAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 188 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 246 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 299

Query: 566 VLALN 570
               +
Sbjct: 300 AWLFD 304



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 123 LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 182

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 183 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 234

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 235 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 288

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 289 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 320


>gi|91775910|ref|YP_545666.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91709897|gb|ABE49825.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 272

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 98/238 (41%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L  G+  + +   Q    P +++  +   L    L  + S +  R+    +I   
Sbjct: 33  VVFLLLWAGVTKLEIFSPQLLVSPWEVLASLHELLGSGELWAHLSVSLSRLGIGFLIGAS 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  L A SR +     P+   ++ +P +  +   ++ F      K+     AA F 
Sbjct: 93  SGLLFGILMALSRTVEDFFSPLFQALRQVPSIALIPIFILLFGIEELFKIAIVTKAAFFT 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          + Y++   IP+   EV+++++L     +  + VP  +P ++  + ++ +
Sbjct: 153 V--------ALASYEATKGIPKHYFEVAQAYQLPNRSLYAKMVVPAILPPVLTGLRIAFA 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +VA+E++          G+G  + +  +   +  ++  ++    + F  D+L 
Sbjct: 205 RSWTILVAAELLAADS------GLGHMMQMGREIFRIDIVMVGVVLTGLIGFGIDRLF 256



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 78/217 (35%), Gaps = 13/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +   W+ +  +       ++   +    +++ R+ +  +I +   +  GI +     +  
Sbjct: 53  LVSPWEVLASLHELLGSGELWAHL---SVSLSRLGIGFLIGASSGLLFGILMALSRTVED 109

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
              P  Q L   P+    P+ +       L    +   ++     + +           P
Sbjct: 110 FFSPLFQALRQVPSIALIPIFILLFGIEEL----FKIAIVTKAAFFTVALASYEATKGIP 165

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             + EVA ++ +     +  +++P I P  +TG   A   +W   + +E+ +        
Sbjct: 166 KHYFEVAQAYQLPNRSLYAKMVVPAILPPVLTGLRIAFARSWTILVAAELLA------AD 219

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +GLG  +    E      V++GV++       ++R  
Sbjct: 220 SGLGHMMQMGREIFRIDIVMVGVVLTGLIGFGIDRLF 256


>gi|17549727|ref|NP_523067.1| transmembranee ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17431982|emb|CAD18659.1| probable transmembranee abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 298

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 10/224 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            D    +   L   +L      +   +L+   + L  +     L   SR     L  +  
Sbjct: 79  SDTARALWAGLADGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQDFLETLTA 138

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +V+F             + IF I  S VW ++ + +    ++   L
Sbjct: 139 MFNPLPAIALLPIALVWFGLGNG--------SLIFVIVHSVVWAVSLNTHAGFLSVSNTL 190

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
             V R++ LSG      + +P + P ++  + +  +  W  ++ASE++    +     G+
Sbjct: 191 RMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTLIASELVFGVSS--GQGGL 248

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           G YI        +  +   +LT++ +  L + L+FR +   + K
Sbjct: 249 GWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVK 292



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 96/288 (33%), Gaps = 16/288 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + +S         +   R    E  L +         L      V   +A     + +  
Sbjct: 12  ADISARAPVYRTPVAFERIGVIEKPLSMAERLYAQAWLRKLAILVALALAWEGGARWLDN 71

Query: 367 IVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISS 416
            +   T+ D    +W G    T+F  +   +   +    +G+ +                
Sbjct: 72  PLLLPTFSDTARALWAGLADGTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQD 131

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    P+ +      + +    L  +++    W +  N  AG  +  
Sbjct: 132 FLETLTAMFNPLPAIALLPIALVWFGLGNGS----LIFVIVHSVVWAVSLNTHAGFLSVS 187

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ ++G  +   I++P  FP  +TG       AW   I SE+     +    
Sbjct: 188 NTLRMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTLIASELVFG--VSSGQ 245

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            GLG YI E+      PEV  G+L +    L +   ++  L     + 
Sbjct: 246 GGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTLEARTVKR 293


>gi|107022636|ref|YP_620963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116689585|ref|YP_835208.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105892825|gb|ABF75990.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116647674|gb|ABK08315.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 270

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 17/248 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------- 384
           +   + + V+  L      VV  V     W S   +          + +           
Sbjct: 12  VAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVK 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R +ILPG  P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 95/262 (36%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++V  +         +    P  +V      +    +      +T R 
Sbjct: 18  RGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 78  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P +
Sbjct: 132 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 190 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   + R  + W   ++
Sbjct: 244 KLADVLAKWIERVTLRWHPAYQ 265


>gi|319793342|ref|YP_004154982.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315595805|gb|ADU36871.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 283

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 80/250 (32%), Gaps = 17/250 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWL 382
               L    R+   L      V   +A  + W S   +           +      +   
Sbjct: 24  KAFGLNVAGRLIPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDVVKAAWSLTVSGELWTH 83

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             ++  R +  + I     + +G+  G      + +    Q++   PA    PLV+    
Sbjct: 84  VKVSAGRALAGLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPALALIPLVILWFG 143

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       L+     + I  N   G         E+  ++ ++ W+ +R +ILPG 
Sbjct: 144 I----DESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVILPGA 199

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
               + G   + G  W   IV+E  S         G+G     + E      V++G+L+ 
Sbjct: 200 LSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDIVLVGILLY 253

Query: 563 CCFVLALNRF 572
                  + F
Sbjct: 254 ALLGKLADLF 263



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 16/256 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
                  +  ++   I + L     +    P D+V           L  +   +  R L+
Sbjct: 34  LIPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDVVKAAWSLTVSGELWTHVKVSAGRALA 93

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + I          L    +    +L   + ++++IP L  +   +++F           
Sbjct: 94  GLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPALALIPLVILWFGID-------- 145

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F I  S  + +  + +  + N+   L E+ R++ LS WQ +  + +P ++  ++ 
Sbjct: 146 ESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVILPGALSSILV 205

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  S+   W  ++ +E I          GIG     A +      +L  +L    +  L
Sbjct: 206 GLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDIVLVGILLYALLGKL 259

Query: 255 YDQLLFRPMIVWSNKF 270
            D L  R +  W  ++
Sbjct: 260 AD-LFARGLEQWWLRW 274


>gi|261855404|ref|YP_003262687.1| binding-protein-dependent transporters inner membrane component
           [Halothiobacillus neapolitanus c2]
 gi|261835873|gb|ACX95640.1| binding-protein-dependent transport systems inner membrane
           component [Halothiobacillus neapolitanus c2]
          Length = 320

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  + +  +I+S+I IP+GI  G     S   +PF +     PA  F  L V+ +    
Sbjct: 127 SISVIFLGFLISSLIAIPLGILAGTFDLFSRLTEPFVEFFRYLPAPAFGALAVAILGI-- 184

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +           +++PG+ P 
Sbjct: 185 --NEAPKIAIIVIGTFFQQVLVVANTTRKIDTSLLEAAMTLGANRLHLLFRVVIPGMLPD 242

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +     +F  V   ++++   
Sbjct: 243 LFRDVRVLLGWAWTYLIVAEMIG------ASSGITWFITQQARYKNFENVYAAIMMIGFI 296

Query: 566 VLALNRFL-W--HPLYLY 580
            +  +  L W    ++ +
Sbjct: 297 GITTDLLLAWLSRRIFPW 314



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P   D   L Q    +   +    +IS L       LA        +  P ++
Sbjct: 105 YTAFTTPPQRRDEKWLYQSLGDSISVIFLGFLISSLIAIPLGILAGTFDLFSRLTEPFVE 164

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V              E   I  I     +     +  +   I   L
Sbjct: 165 FFRYLPAPAFGALAVAILGIN--------EAPKIAIIVIGTFFQQVLVVANTTRKIDTSL 216

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   +     + + +P  +P L  ++ + +   W +++ +EMI          GI
Sbjct: 217 LEAAMTLGANRLHLLFRVVIPGMLPDLFRDVRVLLGWAWTYLIVAEMIGASS------GI 270

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
             +I    + ++   +  A++ +  +    D LL    R +  W 
Sbjct: 271 TWFITQQARYKNFENVYAAIMMIGFIGITTDLLLAWLSRRIFPWQ 315


>gi|261821087|ref|YP_003259193.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605100|gb|ACX87586.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 257

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A I+ +P+G+ +G  P I++   PF Q L   P     PL V  +  
Sbjct: 63  AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + + +++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQIFLHVVLPDTL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +E+ +       T+G+G  +  ++       V+LG+L++ 
Sbjct: 179 PELFTTVRLAIGVGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTDIVMLGILLLG 232

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 233 GIGYVLDLLL 242



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++ + +  R LSA  ++++       L   S  +  V  P +  ++ +P +  +   
Sbjct: 57  SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV+            E +  F IF +   ++      ++  + R    V+++   S  Q 
Sbjct: 117 VVWLGIG--------EASKFFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQI 168

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F ++ +P ++P L   + +++  GW  ++A+EM+          GIG  +  A       
Sbjct: 169 FLHVVLPDTLPELFTTVRLAIGVGWTSLIAAEMVA------ATSGIGWMVMNASAYLRTD 222

Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
            ++  +L + G+ ++ D LL    R  + W+ K
Sbjct: 223 IVMLGILLLGGIGYVLDLLLVGAQRIFVPWAGK 255


>gi|152980281|ref|YP_001352431.1| sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151280358|gb|ABR88768.1| sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 276

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 17/249 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---- 384
            +  +    +++   +       V  +A  + W S   +   F      + + L      
Sbjct: 19  PSTWRASGLKKLVPWIVPVLLISVWQIASQLGWLSSRILPEPFAVAKAAWELALSGELWT 78

Query: 385 ---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              ++++R      +   + + +G+  G      + +    Q++   PA    PLV+   
Sbjct: 79  HVKVSLWRATTSFAVGGGLGLLLGLLTGTFKTAETLLDTTLQMIRNIPALALIPLVILWF 138

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +       L+  G  + +  N   G  +      E+A S+ ++GW  +R +ILPG
Sbjct: 139 GIEETSK----IFLVAVGVFFPVYLNTFHGIRSVDKGLIEMAKSYGLSGWSLYRDVILPG 194

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   + G  W   IV+E  S        +G+G     + E      V++G+L+
Sbjct: 195 ALPSILVGVRFSLGLVWVLLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILL 248

Query: 562 MCCFVLALN 570
                   +
Sbjct: 249 YALLGKLAD 257



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 94/260 (36%), Gaps = 18/260 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
                  +  + V  I + L     +    P  +            L  +   +  R  +
Sbjct: 30  LVPWIVPVLLISVWQIASQLGWLSSRILPEPFAVAKAAWELALSGELWTHVKVSLWRATT 89

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +  +      +   L    +    +L   L ++++IP L  +   +++F           
Sbjct: 90  SFAVGGGLGLLLGLLTGTFKTAETLLDTTLQMIRNIPALALIPLVILWFGIE-------- 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + IF +     + +  + +  + ++ + L E+++S+ LSGW  +  + +P ++P ++ 
Sbjct: 142 ETSKIFLVAVGVFFPVYLNTFHGIRSVDKGLIEMAKSYGLSGWSLYRDVILPGALPSILV 201

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  S+   W  ++ +E I          GIG     A +      +L  +L    +  L
Sbjct: 202 GVRFSLGLVWVLLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLGKL 255

Query: 255 YD---QLLFRPMIVWSNKFR 271
            D   + L    + W   +R
Sbjct: 256 ADVVSRTLEGYWLRWHPGYR 275


>gi|186476406|ref|YP_001857876.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184192865|gb|ACC70830.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 283

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 98/285 (34%), Gaps = 25/285 (8%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS------IGYI 367
           ++    L  + +  P   L   + +   +++ +         A      +      +  +
Sbjct: 8   RRARAGLTPLAYRAPLAALAPLAGRAAPWIVPLVILIAWELAARSGVLSTRVLPEPLAVV 67

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              ++  +   +     ++ +R V    I   I   +G+  G    I   +    Q++  
Sbjct: 68  KAAWSLIESGEMWADVKVSTWRAVSGFAIGGGIGFVLGLATGLFRPIDIALDTTVQMIRN 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA    PLV+                L+  G  + I  N   G  +   +  E+A S+ 
Sbjct: 128 IPALAMIPLVILWFGIE----EEAKLFLVALGVFFPIYVNTYHGIRSVDANLIEMARSYG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G+  +R +ILPG  P  + G   A G  W   IV+E  S        +G+G     + 
Sbjct: 184 VKGFALYRDVILPGALPSILVGVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAR 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYLYGTR 583
           E      VV+G+L+        +            WHP Y  G +
Sbjct: 238 EFLQTDVVVVGILLYAALGKLADMLAKGLERVSLRWHPAYQRGEK 282



 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 90/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      ++   +      +T R +S   I     FV        R + + L 
Sbjct: 60  LPEPLAVVKAAWSLIESGEMWADVKVSTWRAVSGFAIGGGIGFVLGLATGLFRPIDIALD 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 120 TTVQMIRNIPALAMIPLVILWFGIE--------EEAKLFLVALGVFFPIYVNTYHGIRSV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E++RS+ + G+  +  + +P ++P ++  +  +    W  ++ +E I        
Sbjct: 172 DANLIEMARSYGVKGFALYRDVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 226 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKGLERVSLRWHPAYQ 278


>gi|300824178|ref|ZP_07104297.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|331667316|ref|ZP_08368181.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331676724|ref|ZP_08377420.1| putative transport system permease protein [Escherichia coli H591]
 gi|300523354|gb|EFK44423.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|331065672|gb|EGI37565.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331075413|gb|EGI46711.1| putative transport system permease protein [Escherichia coli H591]
          Length = 278

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 29  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 88

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 89  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 140

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 141 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 200

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 201 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 254

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 255 VSAQLLERLWLRWNPAYHLKEAT 277



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 26  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 85

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 86  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 141

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 142 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 202 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 255

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 256 SAQLLERLWLRWNPAYHLKE 275


>gi|269963034|ref|ZP_06177371.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832277|gb|EEZ86399.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 299

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +   L++    +        +  I +    + +   RT   +    ++++      
Sbjct: 65  IILAVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIAIGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  V+ P+LD+MQ++P   +L   V+       GK+ G     I+AI    
Sbjct: 125 GIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E + +F  S  Q+   + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLVGVQLPLAMPTIMAGINQTIMMALSM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           VV + MI V        G+G  +  +I  Q     L   L ++ +  L+D+
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 14/229 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  + I   C     A   +W+                +      T+  + V  ++A  
Sbjct: 60  STPWMIILAVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI +     + S + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 IGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      +  E A++F  +  +    + LP   P  + G       A +
Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLVGVQLPLAMPTIMAGINQTIMMALS 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCF 565
             +++ +           GLG  + +S     F   +L    ++ +   
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIL 277


>gi|315925947|ref|ZP_07922152.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620768|gb|EFV00744.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 265

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R      +A++  I +G+  G  P +     P  QLL       + P +V     
Sbjct: 67  GVSLGRFAAGYALAAVCGIGLGLLFGLFPRVFDYANPVVQLLRPIAPVAWMPFIVLWFGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++     + +L             + +VA +F ++GW+    I+ P  F
Sbjct: 127 GDA----PAVAIIFIAGLFPVLLATARAVGQIAPIYWQVADNFGMSGWQKIAKIVCPAAF 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     A G AW   +  E+          +GLG  I +         ++  + ++ 
Sbjct: 183 PQIMASLQAAIGTAWIFLVSGEMVG------AQSGLGFLIMDCKNAIRSDALLAVMTVIG 236

Query: 564 CFVLALNRFL 573
              L LN+ +
Sbjct: 237 IIGLILNKAV 246



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 84/199 (42%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP +   +  R  +   ++ +       L     R+     P++ +++ I  + ++ F V
Sbjct: 62  LPVHIGVSLGRFAAGYALAAVCGIGLGLLFGLFPRVFDYANPVVQLLRPIAPVAWMPFIV 121

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           +  A+  IF + ++ +  +  +++  I     +V+ +F +SGWQK 
Sbjct: 122 LWFGIG--------DAPAVAIIFIAGLFPVLLATARAVGQIAPIYWQVADNFGMSGWQKI 173

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P + P ++ ++  ++   W F+V+ EM+          G+G  I          A
Sbjct: 174 AKIVCPAAFPQIMASLQAAIGTAWIFLVSGEMVG------AQSGLGFLIMDCKNAIRSDA 227

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L  M  +  +  + ++ +
Sbjct: 228 LLAVMTVIGIIGLILNKAV 246


>gi|315444072|ref|YP_004076951.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Mycobacterium sp. Spyr1]
 gi|315262375|gb|ADT99116.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Mycobacterium sp. Spyr1]
          Length = 293

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 12/251 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    I    P    ++     +  +  I     +    +      +     H      L
Sbjct: 29  RGRRSIWGRIPRPVRRMAGPVAILAVWTIGSTSGLLNTDLFPPPSDVAVTAWHLLTDGGL 88

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T  RV++   +   + + + +  G        +    Q+L A P     PL+
Sbjct: 89  ALHVGTSAT--RVLIGTALGITVGVILAVLAGLTRTGEDLLDWSMQILKAVPNFALTPLL 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            +L+  G    +  N  +G         E+A +           +
Sbjct: 147 IIWMGIGEG----PKIVLITMGVAIAVYINTYSGIRGVDQQLVEMAQTLEARRGTLITQV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPG  P ++ G       AW + I +E+ +       T G+G  ++ +     F   +L
Sbjct: 203 ILPGAMPNFLVGLRLGLSSAWLSLIFAEMIN------TTEGIGFLMSRAQTNLQFDVSLL 256

Query: 558 GVLIMCCFVLA 568
            ++I     LA
Sbjct: 257 VIVIYAVLGLA 267



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 76/212 (35%), Gaps = 14/212 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+       L    L  +   +  R+L    + +    + A LA  +R    +L  
Sbjct: 70  PPPSDVAVTAWHLLTDGGLALHVGTSATRVLIGTALGITVGVILAVLAGLTRTGEDLLDW 129

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + I++++P        +++       K++   +    A++         + Y  +  + 
Sbjct: 130 SMQILKAVPNFALTPLLIIWMGIGEGPKIVLITMGVAIAVY--------INTYSGIRGVD 181

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L E++++           + +P +MP  +  + + +S  W  ++ +EMI         
Sbjct: 182 QQLVEMAQTLEARRGTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMI------NTT 235

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            GIG  ++ A         L  ++    +   
Sbjct: 236 EGIGFLMSRAQTNLQFDVSLLVIVIYAVLGLA 267


>gi|284166069|ref|YP_003404348.1| binding-protein-dependent transporters inner membrane component
           [Haloterrigena turkmenica DSM 5511]
 gi|284015724|gb|ADB61675.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 279

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 82/216 (37%), Gaps = 12/216 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  + +   +       V   ++    ++F  V  +++ +   I VG+ +G+   +   +
Sbjct: 64  LFVRRVSVDLPVAGTAAVPVGLYKLGQSLFHYVPGLVVGNAAGIAVGVAMGWSTRVDDYL 123

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P  +LL   P   +    V     +H       + ++  G  W  L+   +G       
Sbjct: 124 RPVVRLLRPIPPLAWVVFAVLWFGIHHTG----AAFIVFVGAFWITLYGAYSGVEGVSRG 179

Query: 479 FKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           + EVAS   + + W+  R ++LP   P  +T   T+ G  W   + +E+           
Sbjct: 180 YIEVASGLGVESDWQMIRLVVLPAAAPSVLTAVRTSIGRCWMIVVGAELFG-------AP 232

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  I  ++   +    +  + ++    + ++   
Sbjct: 233 GVGYEIINASNNLALDTSIAYMFLISVVYVGMDVAF 268



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 19/210 (9%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                ++    +  +V+              S R+   L P++ +++ IP L ++ F V+
Sbjct: 85  LYKLGQSLFHYVPGLVVGNAAGIAVGVAMGWSTRVDDYLRPVVRLLRPIPPLAWVVFAVL 144

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKF 180
           +F   + G        A F +F    W   +  Y  +  + R   EV+    + S WQ  
Sbjct: 145 WFGIHHTG--------AAFIVFVGAFWITLYGAYSGVEGVSRGYIEVASGLGVESDWQMI 196

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  +  S+   W  VV +E+          PG+G  I  A     L  
Sbjct: 197 RLVVLPAAAPSVLTAVRTSIGRCWMIVVGAELF-------GAPGVGYEIINASNNLALDT 249

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            +  M  +  V    D   + + R ++ W 
Sbjct: 250 SIAYMFLISVVYVGMDVAFRAVERRVLAWQ 279


>gi|158422810|ref|YP_001524102.1| ABC transporter permease [Azorhizobium caulinodans ORS 571]
 gi|158329699|dbj|BAF87184.1| ABC transporter permease [Azorhizobium caulinodans ORS 571]
          Length = 305

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 15/201 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T   +L A  + +L        AA    L   + P+LD+MQ+IP   +L  T+V
Sbjct: 110 WDATVETLSLVLCATFVCVLIGVPVGIAAAHRPWLYTAIRPVLDLMQTIPTFVYLIPTLV 169

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFA+            +  + ++P  L E   +F  +  Q  +
Sbjct: 170 LFGL---GVVPGLISTVIFALPAP-----IRLTHLGISSVPPALVEAGEAFGATRRQLLF 221

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 222 KVELPYALPTIMAGITQCIMLSLSMVVIAALVGS-------DGLGKPVVRALNTVNVAMG 274

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             A + ++ +  + D++  RP
Sbjct: 275 FEAGMAIVILAIVLDRVCKRP 295



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 95/291 (32%), Gaps = 17/291 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +     ++          LS  V  L  T   + F      L        + +L I    
Sbjct: 17  RKPMYDWLVEHKIPLGRWLSAVVDFL-STHAQVVFDVISAVLAAMIGGLTAALLFIPPLL 75

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           ++   A G  W      +  F    +L V  LG       T+  V+    +  +I +PVG
Sbjct: 76  LIAACAAGAYWVHRSIGLAVFILGALLLVANLGYWDATVETLSLVLCATFVCVLIGVPVG 135

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I    RP + + I+P   L+   P  V+    +  +  + L     L   +IF     I 
Sbjct: 136 IAAAHRPWLYTAIRPVLDLMQTIPTFVYL---IPTLVLFGLGVVPGLISTVIFALPAPIR 192

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G S+ P    E   +F  T  +    + LP   P  + G       + +  +++ 
Sbjct: 193 L-THLGISSVPPALVEAGEAFGATRRQLLFKVELPYALPTIMAGITQCIMLSLSMVVIAA 251

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           +         + GLG  +  +    +        + +    + L+R    P
Sbjct: 252 LVG-------SDGLGKPVVRALNTVNVAMGFEAGMAIVILAIVLDRVCKRP 295


>gi|134282218|ref|ZP_01768923.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|134246256|gb|EBA46345.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
          Length = 273

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 28  VPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 87

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 88  GGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 143

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 144 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 203

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 204 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 252



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 44  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 103

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 104 AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 155

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 156 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L    +  L D L   L R  + W
Sbjct: 215 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRW 263


>gi|237812115|ref|YP_002896566.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia pseudomallei MSHR346]
 gi|254188676|ref|ZP_04895187.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|157936355|gb|EDO92025.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|237503830|gb|ACQ96148.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia pseudomallei MSHR346]
          Length = 269

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 24  VPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 83

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 84  GGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 139

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 140 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 199

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 200 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 248



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 40  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 100 AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 151

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 152 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 210

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L    +  L D L   L R  + W
Sbjct: 211 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRW 259


>gi|53719470|ref|YP_108456.1| putative aliphatic sulfonates transport permease [Burkholderia
           pseudomallei K96243]
 gi|53723500|ref|YP_102914.1| aliphatic sulfonate ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|76809266|ref|YP_333386.1| aliphatic sulfonates ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|121601216|ref|YP_993047.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|124384031|ref|YP_001026381.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei NCTC 10229]
 gi|126448233|ref|YP_001080345.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei NCTC 10247]
 gi|167003936|ref|ZP_02269715.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|167719738|ref|ZP_02402974.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167738734|ref|ZP_02411508.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167824328|ref|ZP_02455799.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167894443|ref|ZP_02481845.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167902844|ref|ZP_02490049.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911086|ref|ZP_02498177.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167919108|ref|ZP_02506199.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217423606|ref|ZP_03455107.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|238563474|ref|ZP_00438848.2| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia mallei GB8 horse 4]
 gi|254177778|ref|ZP_04884433.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei ATCC 10399]
 gi|254199854|ref|ZP_04906220.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254206182|ref|ZP_04912534.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254260900|ref|ZP_04951954.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254297751|ref|ZP_04965204.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|254358582|ref|ZP_04974855.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|52209884|emb|CAH35856.1| putative aliphatic sulfonates transport permease protein
           [Burkholderia pseudomallei K96243]
 gi|52426923|gb|AAU47516.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei ATCC 23344]
 gi|76578719|gb|ABA48194.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|121230026|gb|ABM52544.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|124292051|gb|ABN01320.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei NCTC 10229]
 gi|126241103|gb|ABO04196.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei NCTC 10247]
 gi|147749450|gb|EDK56524.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147753625|gb|EDK60690.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148027709|gb|EDK85730.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|157807955|gb|EDO85125.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|160698817|gb|EDP88787.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           mallei ATCC 10399]
 gi|217393464|gb|EEC33485.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|238520662|gb|EEP84120.1| putative aliphatic sulfonates transport permease protein SsuC
           [Burkholderia mallei GB8 horse 4]
 gi|243060625|gb|EES42811.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|254219589|gb|EET08973.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 273

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 28  VPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 87

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 88  GGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 143

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 144 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 203

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 204 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 252



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 44  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 103

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 104 AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 155

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 156 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L    +  L D L   L R  + W
Sbjct: 215 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRW 263


>gi|323945547|gb|EGB41601.1| inner membrane transport system [Escherichia coli H120]
          Length = 226

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187

Query: 495 RYIILPGIFPYYVTGAITACG 515
            ++ILPG  P  +TG     G
Sbjct: 188 WFVILPGALPEILTGLRIGLG 208



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 77/185 (41%), Gaps = 8/185 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P ++  + + + 
Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208

Query: 202 GGWFF 206
            G  +
Sbjct: 209 CGLVY 213


>gi|313902347|ref|ZP_07835751.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313467395|gb|EFR62905.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 285

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 97/230 (42%), Gaps = 14/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           IG + +    I    +    +  + + +      + A  T   ++ A+ +++        
Sbjct: 56  IGGVLLAGWAITRRPLTALTLAALMLAIGAFGYWEAAIETLAMVIVAVALAVAIGLPLGI 115

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
             A+S R+  +++P+LD MQ++P   +L   ++ F  L P       +    A     + 
Sbjct: 116 AMAESCRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP-------VPGTLATVVYALP 168

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +   +   +  +P D++E +R+F  + WQ    + +P ++P ++  +  +       VV
Sbjct: 169 PVARLVDLGIRQVPADVQEAARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALAMVV 228

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + M+  G       G+G  +  AI+  D  A   +  T++ +  + D+L
Sbjct: 229 IASMVGAG-------GVGEAVMRAIQRVDPGAGFESGFTIVALAIVMDRL 271



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 82/269 (30%), Gaps = 10/269 (3%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                L+  V +       I      +   + +              ++ G AI     +
Sbjct: 13  WIQHGLAWLVDRGGGFFHGISVAITRSLNTIEAGLLAVPWWVWIGGVLLAGWAITRRPLT 72

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
              +                  T+  V+V + +A  I +P+GI +     + + + P   
Sbjct: 73  ALTLAALMLAIGAFGYWEAAIETLAMVIVAVALAVAIGLPLGIAMAESCRVHALVIPVLD 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   P+ V+   V+         P    +++        +   V  G    P D +E A
Sbjct: 133 AMQTMPSFVYLIPVMMLFQALGPVPGTLATVVYALP---PVARLVDLGIRQVPADVQEAA 189

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +F  T W+    + LP   P  + G       A    +++ +   G       G+G  +
Sbjct: 190 RAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALAMVVIASMVGAG-------GVGEAV 242

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + ++            +    + ++R 
Sbjct: 243 MRAIQRVDPGAGFESGFTIVALAIVMDRL 271


>gi|75910337|ref|YP_324633.1| binding-protein dependent transport system inner membrane protein
           [Anabaena variabilis ATCC 29413]
 gi|75704062|gb|ABA23738.1| Binding-protein-dependent transport systems inner membrane
           component [Anabaena variabilis ATCC 29413]
          Length = 275

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 99/272 (36%), Gaps = 17/272 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L  +     + +I P I   +  +L        L   +    P  +V           L 
Sbjct: 15  LEVLFNNKYANKIIPWIVPFIVLLLWEISSRTGLLSSRILPAPSSVVFTAFKLASTGELF 74

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   +  R +S  ++     FV   L   SR    +L   L ++++IP L  +   +++
Sbjct: 75  QHMGISAARAISGFIVGGGIGFVLGLLTGFSRLSEQLLDSSLQMLRTIPNLALIPLVILW 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           + A +F +     + +  + Y  + ++   L E+ R + L   Q  W 
Sbjct: 135 FGIG--------DQARLFLVSIGVFFPIYLNTYHGIRSVDPGLIEMGRVYGLKTPQLLWQ 186

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P ++  ++  +  S+   W  ++ +E I          GIG     A +      ++
Sbjct: 187 IVFPGALASILIGVRFSLGIMWLSLIVAEQIAADS------GIGYMAMNAREFMQTDVVV 240

Query: 243 YAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
            +++    +  L + +   L    + W+  ++
Sbjct: 241 LSIVIYALLGKLANSIAKALENKFLAWNPNYK 272



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +   F       +     I+  R +   I+   I   +G+  GF       +    Q+
Sbjct: 59  SVVFTAFKLASTGELFQHMGISAARAISGFIVGGGIGFVLGLLTGFSRLSEQLLDSSLQM 118

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+          +     L+  G  + I  N   G  +      E+  
Sbjct: 119 LRTIPNLALIPLVILWFGIG----DQARLFLVSIGVFFPIYLNTYHGIRSVDPGLIEMGR 174

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            + +   +    I+ PG     + G   + G  W + IV+E  +        +G+G    
Sbjct: 175 VYGLKTPQLLWQIVFPGALASILIGVRFSLGIMWLSLIVAEQIA------ADSGIGYMAM 228

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
            + E      VVL ++I        N
Sbjct: 229 NAREFMQTDVVVLSIVIYALLGKLAN 254


>gi|260460102|ref|ZP_05808355.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034313|gb|EEW35571.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 288

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 87/265 (32%), Gaps = 12/265 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIV 368
           N   +         F      L +  +  V   +   WF +    A+      +    + 
Sbjct: 22  NQPGRSAWKAIATPFRAVSRPLSITLSVLVWIAVIGGWFALTYSGAVKEMFLPRPESVLS 81

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              +      +      ++  V++  +I+SI+ +P+G+ +G    + + + P    +   
Sbjct: 82  TTISMALDGSLWEHVLASVQVVLIGFVISSIVAVPLGLTMGTYRIVQAALDPLVNFIRYL 141

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F PL +  +             ++IFG  +  L  +   A     D    A +   
Sbjct: 142 PVTSFVPLFILWIGIGIEQ----RVAVIIFGIFFQQLVMIADSARGVQRDLVNAAYTLGT 197

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                  +I+ P   P  +       G AW   +V+E+ +        +GLG    ++  
Sbjct: 198 KRGDTVFHIVFPATLPNVLDVLRVTMGWAWTYLVVAELVA------ARSGLGYISLKAMR 251

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 + + + ++    L  ++  
Sbjct: 252 GFQVDVIFMAIAMIGILGLCTDQLF 276



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 101/264 (38%), Gaps = 20/264 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASR 67
           +SR +   +  L+   ++ G   +   G  +      P  ++          SL ++   
Sbjct: 39  VSRPLSITLSVLVWIAVIGGWFALTYSGAVKEMFLPRPESVLSTTISMALDGSLWEHVLA 98

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L   VIS +            R +   L P+++ ++ +P+  F+   +++     
Sbjct: 99  SVQVVLIGFVISSIVAVPLGLTMGTYRIVQAALDPLVNFIRYLPVTSFVPLFILWIGIGI 158

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V       IF IF  Q+      +  S   + RDL   + +         +++  P 
Sbjct: 159 EQRV----AVIIFGIFFQQL----VMIADSARGVQRDLVNAAYTLGTKRGDTVFHIVFPA 210

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  + ++M   W ++V +E++          G+G     A++   +  I  A+  
Sbjct: 211 TLPNVLDVLRVTMGWAWTYLVVAELVA------ARSGLGYISLKAMRGFQVDVIFMAIAM 264

Query: 248 MLGVIFLYDQL---LFRPMIVWSN 268
           +  +    DQL   + R    W+N
Sbjct: 265 IGILGLCTDQLFRGIRRIFAPWAN 288


>gi|260462558|ref|ZP_05810765.1| choline ABC transporter, permease protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031754|gb|EEW33023.1| choline ABC transporter, permease protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 284

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 104/236 (44%), Gaps = 18/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   LVI +I  LL   +   +   +  I  I     +L +   +T + +++A  +++  
Sbjct: 58  VLLALVIAVIAWLLQRSRPLAIGVFLGLIFIIN---QNLWKQTVQTLVLVVAAAAMAMAI 114

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  AA   ++  +++P+LD+MQ++P   +L   +  F     G   G  +  IF I
Sbjct: 115 GVPLGIWAAHKPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGL---GNAPGLIVTIIFVI 171

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T+         +  + ++P+ + E   +F  +  Q  W + +P ++P ++  +  S+  
Sbjct: 172 PTA-----VRLTHLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIML 226

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + +I  G       G+G+ I  A+  + +   L A L ++ +  + D++
Sbjct: 227 SLSMVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 90/282 (31%), Gaps = 25/282 (8%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
              F  F+  +    F   SN +  L   L  I    P   L L        +  I W  
Sbjct: 19  GKAFFGFLTDNFDTVFRAFSNGLNFLLDGLVNILLMVPPVLLALV-------IAVIAWLL 71

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                     +  + +I+N   ++  +        T+  VV    +A  I +P+GIW   
Sbjct: 72  QRSRPLAIGVFLGLIFIINQNLWKQTVQ-------TLVLVVAAAAMAMAIGVPLGIWAAH 124

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           +P +   + P   L+   P  V+   V++     +    +   + +I             
Sbjct: 125 KPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIVTIIFVIPTAVRL----THL 180

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  + P    E   +F  T  +    + LP   P  + G   +   + +  + + +   G
Sbjct: 181 GVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLSMVVFAALIGAG 240

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                  GLG  I  +         +   L +    + L+R 
Sbjct: 241 -------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275


>gi|326317048|ref|YP_004234720.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373884|gb|ADX46153.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 292

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 82/257 (31%), Gaps = 23/257 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC- 384
             P         QR+   L          VA    W S   +       DVL   W    
Sbjct: 30  PAPVRQWAAAVGQRLLPWLVPVALIAAWQVAAAQGWLSSRVLPA---PSDVLKAAWQLGE 86

Query: 385 ---------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                    ++  R +  + I   + + +G+  G      + +    Q++   PA    P
Sbjct: 87  SGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIP 146

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LV+                L+     + I  N   G         E+  ++ ++ W+ +R
Sbjct: 147 LVILWFGI----DESAKVFLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYR 202

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILPG     + G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 203 EVILPGAMSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVV 256

Query: 556 VLGVLIMCCFVLALNRF 572
           ++G+L+        + F
Sbjct: 257 LVGILLYALLGKLADVF 273



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 98/263 (37%), Gaps = 17/263 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASR 67
             + +R+ P     +A +    +         +    P D++       +   L  +   
Sbjct: 38  AAVGQRLLP-WLVPVALIAAWQVAAAQGWLSSRVLPAPSDVLKAAWQLGESGELWTHVKV 96

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R L+ + I      +   L    R    +L   + ++++IP L  +   +++F    
Sbjct: 97  SAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIPLVILWFGID- 155

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A +F I  S  + +  + +  + N+   L E+ R++ LS WQ +  + +P 
Sbjct: 156 -------ESAKVFLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYREVILPG 208

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +M  ++  +  S+   W  ++ +E I          GIG     A +      +L  +L 
Sbjct: 209 AMSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVGILL 262

Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270
              +  L D    R +  W  ++
Sbjct: 263 YALLGKLADVF-ARGLEHWWLRW 284


>gi|260903030|ref|ZP_05911425.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308108320|gb|EFO45860.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ4037]
          Length = 280

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGIIKVPEELLEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           S     +  TL  I     + F  +     +     + WF   
Sbjct: 10  PLGQWMETGVDWLTINASGFFDAISITLETIIMFVVDIFKWMPPAAPIIMTAALAWFLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  SLPLVVFIVLALLAILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 IKVPEELLEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|295698916|ref|YP_003606809.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295438129|gb|ADG17298.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 294

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 91/285 (31%), Gaps = 25/285 (8%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +  +   R         P   +          ++ +  F ++  VA  + W    ++   
Sbjct: 16  DTARDSTRARSAAHGRRPYRGMPGEGPTAWLSVICVAAFALLWWVATHLHWIPPLFLPAP 75

Query: 371 FTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                     W G I            +  RV     +ASI  IPVGI +G        +
Sbjct: 76  DAVWHAFVDAWHGRIQGGLPLSEHLLWSAIRVFGAFALASITAIPVGILMGVSRVARGLL 135

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  +     P   + PLVV               +++       I     AG  +   +
Sbjct: 136 DPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIWLACFAPIAMAARAGVRSASVE 191

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A S      +   +++LP   P  +TG   A G  W   + +E+ +       T G
Sbjct: 192 QVNAAWSLGANFRQVVLHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAG 245

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           LG  +  ++       VV+G++++       +   R L   L  +
Sbjct: 246 LGQMVLNASSFLRTDVVVMGIVLIGLIAWLFDLGMRALERRLVPW 290



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   + +R+  A  ++ +       L   SR    +L P L+  + +P L +L   V
Sbjct: 96  LSEHLLWSAIRVFGAFALASITAIPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   +  Q  
Sbjct: 156 IWFGID--------ETAKIVVIWLACFAPIAMAARAGVRSASVEQVNAAWSLGANFRQVV 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 208 LHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 261

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + +L+D   + L R ++ W  K
Sbjct: 262 VVMGIVLIGLIAWLFDLGMRALERRLVPWKGK 293


>gi|187924081|ref|YP_001895723.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187715275|gb|ACD16499.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 286

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVISLL 81
                +  +         +   P + V    I L     L +    +  R+L       L
Sbjct: 46  ALLFALWAVGCERGWIAPQILPPPERVFETLIELARSGDLARNTLVSLQRVLLGFGAGTL 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F        SR L   ++P  + +  IP+LG+L F ++      P K I         
Sbjct: 106 LGFALGAALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYI--------L 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +  +T S  Q     P  L EV+R F  SGWQ+  YL +P ++P L   + ++ +
Sbjct: 158 IAHAALVPVTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFT 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +V  E++   +      G+G  I    +   L  ++ +++ +  + +  ++ L
Sbjct: 218 KAWLALVVVELVASSE------GLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 269



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 91/253 (35%), Gaps = 16/253 (6%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVA--IGIAWQSI----GYIVNHFTYQDVLYVI 380
           F E  L+  + +   ++L    F +         IA Q +                  + 
Sbjct: 27  FREPRLRALAWRLAPWVLPALLFALWAVGCERGWIAPQILPPPERVFETLIELARSGDLA 86

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +++ RV++     +++   +G  +G    + + + P    L   P   + P ++  
Sbjct: 87  RNTLVSLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLL 146

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V            +L+       +  + + G    P    EVA  F  +GW+   Y++LP
Sbjct: 147 VGVG----EPLKYILIAHAALVPVTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLP 202

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P   TG   A   AW A +V E+ +       + GLG  I    +      V+  V+
Sbjct: 203 AAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMASVV 256

Query: 561 IMCCFVLALNRFL 573
           ++     A+NR L
Sbjct: 257 VVGAIGYAVNRAL 269


>gi|163849784|ref|YP_001637827.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163661389|gb|ABY28756.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 279

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 91/242 (37%), Gaps = 17/242 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +   L   +    P  +   +        L  +   T +R+            +   L
Sbjct: 46  AAVAAGLASGRLLPPPSRVAAALWTLAASGELWTHVEATLIRVGLGFAFGAGVGILAGAL 105

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A    L  ++ P L  ++++P L ++   +++F  L   KV    +   F ++      
Sbjct: 106 TATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGILETPKVALIAVGVFFPVY------ 159

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
               +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA
Sbjct: 160 --IGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLPATLTALRTGLGLGFLFVVA 217

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +E++   +      G+G  +    +      IL A+++   V    D     L  P++ W
Sbjct: 218 AELMGASE------GLGYLLLDGQQFSKPDQILAAIISFAVVGKAADAALVALTSPLVRW 271

Query: 267 SN 268
            +
Sbjct: 272 QD 273



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV +     + + I  G      P +   + P  Q L A P+  + PL +      
Sbjct: 83  ATLIRVGLGFAFGAGVGILAGALTATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGIL 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V    ++      EV   F ++     R I+LP + P
Sbjct: 143 ETPK----VALIAVGVFFPVYIGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T   T  G  +   + +E+         + GLG  + +  +     +++  ++    
Sbjct: 199 ATLTALRTGLGLGFLFVVAAELMG------ASEGLGYLLLDGQQFSKPDQILAAIISFAV 252

Query: 565 FVLALN 570
              A +
Sbjct: 253 VGKAAD 258


>gi|226944292|ref|YP_002799365.1| ABC transporter inner membrane permease [Azotobacter vinelandii DJ]
 gi|226719219|gb|ACO78390.1| ABC transporter, inner membrane permease component [Azotobacter
           vinelandii DJ]
          Length = 273

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 95/232 (40%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++      L   SL  + + +  R++  +++ +L       +         +L P
Sbjct: 56  PSPASVLRHALPMLADGSLFVHWAASASRVIGGVLLGVLAAVPVGFVLGWYAGARRLLTP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L+  +++P +  +  T+VYF           E A I  +  +  +     +Y+ +  I 
Sbjct: 116 LLNFFRALPPIALIPLTIVYFGIG--------EAAKILVLVYAAFFTAVVVLYEGISRIA 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V+R+   S  + F  + +P ++P ++    +++  GW  +VASE++   +     
Sbjct: 168 PIYVNVARTLGASERELFLRVVLPLALPHVLTATRVALGVGWMTLVASELVSAQN----- 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFR 271
            G+GS I +A     L  I   ++ +       D LL R    ++ W  + +
Sbjct: 223 -GLGSMIQVAASYFQLEVIYLGLICIGFTAMAMDFLLVRLSARLVGWQERVK 273



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 78/230 (33%), Gaps = 13/230 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +       + +         +      +  RV+  +++  +  +PVG  +G+      
Sbjct: 52  AALVPSPASVLRHALPMLADGSLFVHWAASASRVIGGVLLGVLAAVPVGFVLGWYAGARR 111

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P      A P     PL +               L++++   +  +  +  G S   
Sbjct: 112 LLTPLLNFFRALPPIALIPLTIVYFGIGEA----AKILVLVYAAFFTAVVVLYEGISRIA 167

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             +  VA +   +    +  ++LP   P+ +T    A G  W   + SE+ S        
Sbjct: 168 PIYVNVARTLGASERELFLRVVLPLALPHVLTATRVALGVGWMTLVASELVS------AQ 221

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH---PLYLYGTR 583
            GLG+ I  +        + LG++ +    +A++  L      L  +  R
Sbjct: 222 NGLGSMIQVAASYFQLEVIYLGLICIGFTAMAMDFLLVRLSARLVGWQER 271


>gi|126451586|ref|YP_001066103.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|167845873|ref|ZP_02471381.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei B7210]
 gi|242316569|ref|ZP_04815585.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254198225|ref|ZP_04904647.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|126225228|gb|ABN88768.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|169654966|gb|EDS87659.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|242139808|gb|EES26210.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
          Length = 269

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V   L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 24  VPLALVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 83

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 84  GGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 139

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 140 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 199

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           W   IV+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 200 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 248



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 90/248 (36%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA VL             +    P  +V      ++   +      +T R L    I   
Sbjct: 26  LALVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGG 85

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+   + L   + ++++IP L  +   +++F           E A +F 
Sbjct: 86  VGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFL 137

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++ 
Sbjct: 138 VALGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALG 197

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D L   
Sbjct: 198 LMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKW 251

Query: 259 LFRPMIVW 266
           L R  + W
Sbjct: 252 LERATLRW 259


>gi|324019054|gb|EGB88273.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 278

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 29  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSRRALIGF 88

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 89  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 140

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 141 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 200

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 201 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 254

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 255 VSAQLLERLWLRWNPAYHLKEAT 277



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 86/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+  R +
Sbjct: 26  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSRRAL 85

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 86  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 141

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 142 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 202 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 255

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 256 SAQLLERLWLRWNPAYHLKE 275


>gi|311899644|dbj|BAJ32052.1| putative aliphatic sulfonate ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 282

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 84/228 (36%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++  V        L    S +  R    ++       V   +    R    +L 
Sbjct: 58  LASPGQVLQAVQELWGNGQLSDALSTSLTRAALGLLFGAGIGLVLGVVTGFFRLGEELLD 117

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +V+F           E A I  I  +  + M  S    + N 
Sbjct: 118 SAVQVLRTVPFLALVPLFMVWFGI--------TETAKIALIGVATSFPMYVSASGGVRNT 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E  RSF LS W     + +P ++P L+  + +SM+     ++A+E I        
Sbjct: 170 DRKLVEAMRSFGLSRWAIVREVVLPGALPALLSGLRLSMTLSVIALIAAEEI------NS 223

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             GIG  +A A        +   +L    +    D   ++L R ++ W
Sbjct: 224 TEGIGYLMAQAQNFSRTDVLAVCILIYGLLGLAADGAVRVLERVLMPW 271



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R  + ++  + I + +G+  GF       +    Q+L   P     PL +       
Sbjct: 84  SLTRAALGLLFGAGIGLVLGVVTGFFRLGEELLDSAVQVLRTVPFLALVPLFMVWFGITE 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+   T + +  +   G         E   SF ++ W   R ++LPG  P 
Sbjct: 144 T----AKIALIGVATSFPMYVSASGGVRNTDRKLVEAMRSFGLSRWAIVREVVLPGALPA 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   +  A I +E  +       T G+G  +A++        + + +LI    
Sbjct: 200 LLSGLRLSMTLSVIALIAAEEIN------STEGIGYLMAQAQNFSRTDVLAVCILIYGLL 253

Query: 566 VLALN 570
            LA +
Sbjct: 254 GLAAD 258


>gi|116490616|ref|YP_810160.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oenococcus oeni PSU-1]
 gi|290890023|ref|ZP_06553108.1| hypothetical protein AWRIB429_0498 [Oenococcus oeni AWRIB429]
 gi|116091341|gb|ABJ56495.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Oenococcus oeni PSU-1]
 gi|290480370|gb|EFD89009.1| hypothetical protein AWRIB429_0498 [Oenococcus oeni AWRIB429]
          Length = 231

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++FR ++  II   I   +G+  G             Q+L   P     PL++  +  
Sbjct: 35  GISLFRALLGFIIGGGIGFILGVLNGIFKVCRLAFDNTIQMLRNIPHLALIPLIILVIGI 94

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G  + +  N   G ++      E+  S+ ++  + +  II PG  
Sbjct: 95  GEPSK----IFLVSVGCMFPMYINTYHGVTSIDKGLVEMGRSYGLSNSQVFFKIIFPGAL 150

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  +       ++G+G    E+ +      V+L +LI  
Sbjct: 151 PTILMGVRYALGVMWTTLIVAETVA------TSSGIGYMANEAEQFTDMSTVILCILIYA 204

Query: 564 CFVLALN 570
            F    +
Sbjct: 205 LFGKLSD 211



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI+           L +    +  R L   +I     F+   L    +   +   
Sbjct: 11  LPAPSDILLDAWKLFKSGELQKNIGISLFRALLGFIIGGGIGFILGVLNGIFKVCRLAFD 70

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   ++      P K        IF +    ++ M  + Y  + +I
Sbjct: 71  NTIQMLRNIPHLALIPLIILVIGIGEPSK--------IFLVSVGCMFPMYINTYHGVTSI 122

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L E+ RS+ LS  Q F+ +  P ++P ++  +  ++   W  ++ +E +        
Sbjct: 123 DKGLVEMGRSYGLSNSQVFFKIIFPGALPTILMGVRYALGVMWTTLIVAETVATSS---- 178

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSN 268
             GIG     A +  D+  ++  +L       L D    LL    +VW N
Sbjct: 179 --GIGYMANEAEQFTDMSTVILCILIYALFGKLSDFIAKLLEDTFLVWQN 226


>gi|325288674|ref|YP_004264855.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964075|gb|ADY54854.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 279

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 92/237 (38%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             A ++V  ++     G +        + ++       +L      T + ++ + ++S+ 
Sbjct: 48  WWALIVVFALVAWRAKGWKLAAGTAAGLGLIY----NLNLWPAFLDTLILVMISALVSMA 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LAAK+ +   ++ P+LD MQ++P   +L   +++F           ++ A+FA
Sbjct: 104 VGIPLGILAAKNDKFNWLISPVLDFMQTMPAYVYLIPALLFFGIG--------KVPAVFA 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +          +  +P +L EV  +F     Q    + +P ++P ++  +  +M 
Sbjct: 156 TVVFSMPPAIRLTNLGIRQVPVELVEVGEAFGSKPGQLLLKIQLPVALPTIMAGINQTMM 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV S MI  G            +  AI +  +       + ++ +  + D++
Sbjct: 216 LSLSMVVISSMIGAGGLGGG-------VLEAISQLKIGMGFEYGVAVVIMAIILDRI 265



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 8/189 (4%)

Query: 343 MLDIFWFCVVCGVAIGI----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +L I W+ ++   A+       W+              L +      T+  V++  +++ 
Sbjct: 43  LLLIPWWALIVVFALVAWRAKGWKLAAGTAAGLGLIYNLNLWPAFLDTLILVMISALVSM 102

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            + IP+GI        +  I P    +   PA V+    +       +       +    
Sbjct: 103 AVGIPLGILAAKNDKFNWLISPVLDFMQTMPAYVYLIPALLFFGIGKVPAVFATVVF--- 159

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
            +    +     G    P +  EV  +F     +    I LP   P  + G       + 
Sbjct: 160 -SMPPAIRLTNLGIRQVPVELVEVGEAFGSKPGQLLLKIQLPVALPTIMAGINQTMMLSL 218

Query: 519 NASIVSEVA 527
           +  ++S + 
Sbjct: 219 SMVVISSMI 227


>gi|302340537|ref|YP_003805743.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637722|gb|ADK83149.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 246

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     TM R V  I++ S+I +P+G+  G    I   + P + LL   P     P
Sbjct: 45  PGVLLAHAGATMLRAVTAIVVTSLIAVPLGVAAGRCRLIDRVLSPVSYLLYPIPKVALLP 104

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +V+          N    +L+I    + ++  +   A+  P+ +               R
Sbjct: 105 VVMLLFGLG----NQAKVILLILVLFFQMMLAIRDAAANIPDQYFTTIEVLGGGPLAKLR 160

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+I+P   P YVT      G A  A   SE  +         GLG +I +   + ++PE+
Sbjct: 161 YVIIPAGLPRYVTALRVGTGTALAALFFSETFA------THYGLGFFIMDCWMRINYPEM 214

Query: 556 VLGVLIMCCFVLAL 569
             G++ M      +
Sbjct: 215 FAGIIAMGVVGGIM 228



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 82/238 (34%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   +VI +   L     E   P      +  +L    L  +A  T LR ++A+V++ L
Sbjct: 9   IIGLGVVILLWAALSSFRPEIIPPPLSTFALFFSLLPGVLLAHAGATMLRAVTAIVVTSL 68

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   A + R +  VL P+  ++  IP +  L   ++ F      KVI   L   F 
Sbjct: 69  IAVPLGVAAGRCRLIDRVLSPVSYLLYPIPKVALLPVVMLLFGLGNQAKVILLILVLFF- 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   M  ++  +  NIP                K  Y+ +P  +P  V  + +   
Sbjct: 128 -------QMMLAIRDAAANIPDQYFTTIEVLGGGPLAKLRYVIIPAGLPRYVTALRVGTG 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +  SE            G+G +I       +   +   ++ M  V  +   L+
Sbjct: 181 TALAALFFSETFA------THYGLGFFIMDCWMRINYPEMFAGIIAMGVVGGIMFALI 232


>gi|260771576|ref|ZP_05880496.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio metschnikovii CIP 69.14]
 gi|260613353|gb|EEX38552.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio metschnikovii CIP 69.14]
          Length = 279

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 88  WQEMLETFVLVFAATTISVLIGVPIGIMAAHRAWLYTLLRPILDLMQTVPTFVYLIPTLV 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 148 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGVTRVPEELLEAGKAFGASKMKLLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 200 KVELPAALPSIMAGITQCIMLSLSMVVIAALV-------GADGLGKPVIRALNTVNISQG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 253 FEAGLAIVLVAIILDRL 269



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 81/255 (31%), Gaps = 11/255 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R   VI F    + L L    +                 +  ++  + +I+        L
Sbjct: 26  RFFDVIAFVLESSILLLIDLFKAMPPAAPILITAALAWWLHRSFSLVIFIIASLLLILNL 85

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   T   V     I+ +I +P+GI    R  + + ++P   L+   P  V+    
Sbjct: 86  GYWQEMLETFVLVFAATTISVLIGVPIGIMAAHRAWLYTLLRPILDLMQTVPTFVYL--- 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +  + L     L   +IF     I      G +  P +  E   +F  +  +    +
Sbjct: 143 IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGVTRVPEELLEAGKAFGASKMKLLFKV 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G       + +  +++ +           GLG  +  +    +  +   
Sbjct: 202 ELPAALPSIMAGITQCIMLSLSMVVIAALVG-------ADGLGKPVIRALNTVNISQGFE 254

Query: 558 GVLIMCCFVLALNRF 572
             L +    + L+R 
Sbjct: 255 AGLAIVLVAIILDRL 269


>gi|167815958|ref|ZP_02447638.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 91]
          Length = 241

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 10/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ML   +      ++  +  + +  +   +   +   +     ++ +R +V   I   + +
Sbjct: 1   MLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGL 60

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+  G        +    Q++   PA    PLV+                L+  G  +
Sbjct: 61  ALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVALGVFF 116

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  W   I
Sbjct: 117 PVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLI 176

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 177 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 220



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 12  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 71

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 72  AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 123

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 124 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 182

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L    +  L D L   L R  + W
Sbjct: 183 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRW 231


>gi|126728823|ref|ZP_01744638.1| glycine betaine/proline ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126710753|gb|EBA09804.1| glycine betaine/proline ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 344

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 80/194 (41%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +     I +L         ++S RL  +L P+LD++Q++P   +L   +  F 
Sbjct: 150 AMQTLAIIFVCAFICVLIGVPIGIAMSRSDRLQGILTPVLDMLQTLPPFVYLIPLIFLFS 209

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P            A+    +  +       +  +  D+ E + +F ++  QK + + 
Sbjct: 210 VTEPKLYG-------IAVILYAIVPVVRLTNLGIRLVNPDVIEAADAFGMTKSQKLFGVQ 262

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + M+         PG+G  +   I+  +L   L A
Sbjct: 263 IPLALPNIMAGVNQTIMMSLAMVVIASMVS-------APGLGILVLRGIRNLELGVGLIA 315

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +    D++
Sbjct: 316 GLGIVVLAIALDRV 329



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 79/231 (34%), Gaps = 10/231 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    +    ++    +G +W+ +G++         +    +   T+  + V   I  +I
Sbjct: 108 TPWWAMVPILLLITWVVGRSWKVVGFVALVLAGLAFVDHYEVAMQTLAIIFVCAFICVLI 167

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     +   + P   +L   P  V+    +  +  + +       + +I   
Sbjct: 168 GVPIGIAMSRSDRLQGILTPVLDMLQTLPPFVYL---IPLIFLFSVTEPKLYGIAVILYA 224

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++     G      D  E A +F +T  +    + +P   P  + G       +   
Sbjct: 225 IVPVVRLTNLGIRLVNPDVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLAM 284

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +++ + S         GLG  +            ++  L +    +AL+R
Sbjct: 285 VVIASMVS-------APGLGILVLRGIRNLELGVGLIAGLGIVVLAIALDR 328


>gi|149913953|ref|ZP_01902485.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149812237|gb|EDM72068.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 690

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 79/603 (13%), Positives = 180/603 (29%), Gaps = 90/603 (14%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +L +      +           L +         T   +  ++  ++L  F       +S
Sbjct: 97  VLAYAASGWRLALFTFGASAYMLAIGY-WDAGMNTLSLVAISVPSAILVGFAIGVWGFRS 155

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
            R   +++P LD++Q++P   +L   ++ F            +  + A        M  +
Sbjct: 156 PRAERIIMPALDLLQTVPTFAYLLPILMLFG--------FGTVVGLIASILYSFPPMVRN 207

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L     ++ E       +  Q FW + VP +   L+  +  +       V+ + +I
Sbjct: 208 TILGLRRAAPEVIESGLMAGATTRQLFWQVRVPSARRQLLLGVNQATMASLSMVIIASII 267

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---------------- 257
                      +G  +   I++      L   L +  +  + D+                
Sbjct: 268 GGTAD------LGWEVLSTIRKAQFGESLLVGLVIALMAMVIDRVTSGLANGSDRDGMPR 321

Query: 258 --------------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR------- 290
                               L+   +  W   +R      +  A S  +  FR       
Sbjct: 322 YHRHLWIIAVLGSIVIFAASLVAPILNEWPEAYRFNPAPVMNEALSGFITTFRTQIEMIK 381

Query: 291 -----------KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
                      K      +   +W F    ++++     T+ +  +       ++     
Sbjct: 382 TAAFYFLMLPVKIGLQGAVSPYTWGFSLTTAHSLAFALSTVALALWSTTRRGPKVGIAIL 441

Query: 340 V-----SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFR 389
           V      + L    +  +  +   +A+   G +++  T   + +++  G      ++++ 
Sbjct: 442 VFAVVYYFGLTGLPWPALILLLALLAYGIGGVVLSFGTILGLAFILVTGNWPAAVLSIYL 501

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             + ++IA  I   +GIW      +S+ ++P    L   P  V     V           
Sbjct: 502 CGIAVVIAFTIGTAIGIWAAQNDRVSAFVRPINDTLQTMPLFVILIPFVMVFRIGDFTAL 561

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L +    I     Y       G  + P+   E A     T  +    + +P   P  + G
Sbjct: 562 LSVIAYAIVPAIRY----AEHGLRSLPDTVIEAARMVGATPRQMLWQVQIPLALPVIMLG 617

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                       +++ +   G       GL   +  +   G+  E ++  L M    +  
Sbjct: 618 LNQTILYGIAMLVIAALVGAG-------GLEQTVYTALTDGNVGEGLIAGLAMAVIAIIA 670

Query: 570 NRF 572
           +R 
Sbjct: 671 DRM 673



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 81/232 (34%), Gaps = 12/232 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + + + +F FCV+   A G  W+   +      Y   +     G  T+  V + +  A +
Sbjct: 86  LPWSVTMFGFCVLAYAASG--WRLALFTFGASAYMLAIGYWDAGMNTLSLVAISVPSAIL 143

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +G+W    P     I P   LL   P   +   ++    +  +   +      I  
Sbjct: 144 VGFAIGVWGFRSPRAERIIMPALDLLQTVPTFAYLLPILMLFGFGTVVGLIAS----ILY 199

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   ++ N I G      +  E       T  + +  + +P      + G   A   + +
Sbjct: 200 SFPPMVRNTILGLRRAAPEVIESGLMAGATTRQLFWQVRVPSARRQLLLGVNQATMASLS 259

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             I++ +            LG  +  +  K  F E +L  L++    + ++R
Sbjct: 260 MVIIASIIGGTAD------LGWEVLSTIRKAQFGESLLVGLVIALMAMVIDR 305


>gi|257054195|ref|YP_003132027.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256584067|gb|ACU95200.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 298

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 22/243 (9%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           +P  +      LV  ++ + L G +          ++    D       A +T   +L A
Sbjct: 58  WPPSW---VMFLVFALLALWLRGWKFALTTLLGFALI----DALGAFDSAMQTLALVLLA 110

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            VIS++       LAA+S     ++ PI+D +Q++P   +L   V++F     G   G  
Sbjct: 111 AVISVILAVPLGVLAARSDTASRIIKPIMDFLQTVPQFVYLIPAVIFFG---IGVGPGVV 167

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              +FA+               +  + R++ E   +F     +    + +P +MP ++  
Sbjct: 168 ATVMFALAPG-----VRLTELGIRQVDREMVEAGEAFGSPPMKILREIQLPLAMPSIMAG 222

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +   +      VV + M+         PG+G+ +  A     L       L+++ +    
Sbjct: 223 VNQIIMLSLSMVVIAGMV-------GAPGLGAQVFEATTRLQLGVGFEYGLSVVILAIYL 275

Query: 256 DQL 258
           D+L
Sbjct: 276 DRL 278



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 80/278 (28%), Gaps = 14/278 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                       S+ V  L   LG +     E    + S           W   +    +
Sbjct: 12  WHMPRIPVGEWFSDGVDWLKDKLGAVFDAISEGTDSIVSGLADVLQWPPSWVMFLVFALL 71

Query: 358 GIAWQSIGYIVNHFT---YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            +  +   + +         D L        T+  V++  +I+ I+ +P+G+        
Sbjct: 72  ALWLRGWKFALTTLLGFALIDALGAFDSAMQTLALVLLAAVISVILAVPLGVLAARSDTA 131

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S  I+P    L   P  V+    V           +   +  +             G   
Sbjct: 132 SRIIKPIMDFLQTVPQFVYLIPAVIFFGIGVGPGVVATVMFALAPGVRL----TELGIRQ 187

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              +  E   +F     +  R I LP   P  + G       + +  +++ +        
Sbjct: 188 VDREMVEAGEAFGSPPMKILREIQLPLAMPSIMAGVNQIIMLSLSMVVIAGMVG------ 241

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              GLGA + E+T +          L +    + L+R 
Sbjct: 242 -APGLGAQVFEATTRLQLGVGFEYGLSVVILAIYLDRL 278


>gi|116696161|ref|YP_841737.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530660|emb|CAJ97007.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 265

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 16/203 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L+   I      V+ T    SR    ++ P    ++ I +  ++    V+F      
Sbjct: 71  WRDLAGFAIGASAGLVFGTALGLSRLFERMVGPSFHTVKQISLFAWIPLISVWFGLGDAA 130

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV+   LAA F         +  + ++ +  +P DL EV+R  R S  Q  W + +P + 
Sbjct: 131 KVVFLSLAAFF--------PVVLNTFEGIRAVPADLLEVARVLRFSRTQVLWRVVLPSAA 182

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + + +   W   + +E ++V        GIG+ +    +   +  +++ ++ + 
Sbjct: 183 PSIFAGIHLGLIYAWLATLGAEYLLVSGK-----GIGNTMTDGRENFWMDLVIFGVIVVG 237

Query: 250 GVIFLYDQLLFR---PMIVWSNK 269
            V F  + +  R    ++ W  +
Sbjct: 238 LVGFTLNWIASRIESRLLAWRGR 260



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 76/255 (29%), Gaps = 15/255 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +        L L         +   W      V +   W +    +       
Sbjct: 5   AIRPRIRLHRALRGWVLPLALLALWWAAVRFGWTTSPLLVPVSSVWDTAVRQLQS----- 59

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      +++R +    I +   +  G  +G        + P    +       + P
Sbjct: 60  -GALATALAASLWRDLAGFAIGASAGLVFGTALGLSRLFERMVGPSFHTVKQISLFAWIP 118

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+            ++LS        + ++ N   G  A P D  EVA     +  +   
Sbjct: 119 LISVWFGLGDAAKVVFLS----LAAFFPVVLNTFEGIRAVPADLLEVARVLRFSRTQVLW 174

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P    G       AW A++ +E        +   G+G  + +  E      V
Sbjct: 175 RVVLPSAAPSIFAGIHLGLIYAWLATLGAEYLL-----VSGKGIGNTMTDGRENFWMDLV 229

Query: 556 VLGVLIMCCFVLALN 570
           + GV+++      LN
Sbjct: 230 IFGVIVVGLVGFTLN 244


>gi|67923047|ref|ZP_00516540.1| Binding-protein-dependent transport systems inner membrane
           component [Crocosphaera watsonii WH 8501]
 gi|67855126|gb|EAM50392.1| Binding-protein-dependent transport systems inner membrane
           component [Crocosphaera watsonii WH 8501]
          Length = 297

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  +   +++A++  L+       ++AK+  L  V+ P+LD+MQ++P   +L   V+
Sbjct: 110 WEQAMVSLALVVTAVLFCLMVGIPVGVISAKNDPLERVIRPLLDVMQTLPSFVYLVPVVM 169

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G+V G     IFAI       +       +  +  ++ E + +F  + WQ  W
Sbjct: 170 LFG---IGEVPGVIATIIFAIP-----PLIRLTNLGIRQVSPEVTEAAIAFGSTPWQVLW 221

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
              +P +MP ++  +  ++       V + MI V       PG+G  +   +   D+   
Sbjct: 222 EAQIPLAMPTILAGVNQAILMALSMSVVTSMIAV-------PGLGQMVLQGVGRLDVGLA 274

Query: 242 LYAMLTMLGVIFLYDQL 258
               L ++ +  + D++
Sbjct: 275 AVGGLGIVLLAIMLDRM 291



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 16/243 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFR 389
              +R+ +        +   +   +AW+  G     Y +   T    +       +++  
Sbjct: 60  WGLKRIEWGFSAIPPLIFIIIIGILAWKLAGKKIAIYSIISLTLIGFVGAWEQAMVSLAL 119

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  ++   ++ IPVG+       +   I+P   ++   P+ V+   VV       +   
Sbjct: 120 VVTAVLFCLMVGIPVGVISAKNDPLERVIRPLLDVMQTLPSFVYLVPVVMLFGIGEVPGV 179

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   +  I      ++     G      +  E A +F  T W+      +P   P  + G
Sbjct: 180 IATIIFAI----PPLIRLTNLGIRQVSPEVTEAAIAFGSTPWQVLWEAQIPLAMPTILAG 235

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   A + S+V+ + +         GLG  + +   +       +G L +    + L
Sbjct: 236 VNQAILMALSMSVVTSMIA-------VPGLGQMVLQGVGRLDVGLAAVGGLGIVLLAIML 288

Query: 570 NRF 572
           +R 
Sbjct: 289 DRM 291


>gi|86751168|ref|YP_487664.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86574196|gb|ABD08753.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 256

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 13/209 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++     +  RV++ +I    + +PVG  +G+     +   P      A P     PLV
Sbjct: 55  HLLLDIWASTRRVLLGVIAGIAVAVPVGFVLGWYRGARTFADPMINFFRALPPIALIPLV 114

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +           +   +++ + + +  +  +  G S     +  VA +   + +  +R +
Sbjct: 115 IVYFGV----DEVAKLVILFYASFFAGVIVMYEGVSQITPLYIRVAHTLGASEFEIFRKV 170

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I+P   P+ +T    A G AW   + SE+ +         GLGA I  ++       + +
Sbjct: 171 IIPLTVPHILTALRVALGVAWATLVASELIA------AQRGLGAMIQNASTYFLLDVIYV 224

Query: 558 GVLIMCCFVLALNRFLWH---PLYLYGTR 583
           G++ + C  L ++  L      L ++  R
Sbjct: 225 GIICIGCIALIMDLILRRISARLLVWQER 253



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 102/263 (38%), Gaps = 18/263 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++RR+   +   +  VL+   +             P ++       L    L      +T
Sbjct: 5   VARRVILGLTPWVGAVLLWYAVRWSGFVNPSLIPAPHNVAAKFVELLFQEHLLLDIWAST 64

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R+L  ++  +        +    R       P+++  +++P +  +   +VYF      
Sbjct: 65  RRVLLGVIAGIAVAVPVGFVLGWYRGARTFADPMINFFRALPPIALIPLVIVYFGVD--- 121

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E+A +  +F +  +     MY+ +  I      V+ +   S ++ F  + +P ++
Sbjct: 122 -----EVAKLVILFYASFFAGVIVMYEGVSQITPLYIRVAHTLGASEFEIFRKVIIPLTV 176

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + +++   W  +VASE+I          G+G+ I  A     L  I   ++ + 
Sbjct: 177 PHILTALRVALGVAWATLVASELIA------AQRGLGAMIQNASTYFLLDVIYVGIICIG 230

Query: 250 GVIFLYDQLLFR---PMIVWSNK 269
            +  + D +L R    ++VW  +
Sbjct: 231 CIALIMDLILRRISARLLVWQER 253


>gi|330821016|ref|YP_004349878.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327373011|gb|AEA64366.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 293

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I        +  ++     +  RV       + + + VG  +G    I + ++P  Q L 
Sbjct: 74  IFATLERMGLARLMRHVGASTLRVAAGFAAGAGLALAVGAAMGLSRRIDALLEPSFQALR 133

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P+  + P+++  +             L+  G  + +   V+AG         E+ + +
Sbjct: 134 AIPSLAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRGVDRKLVELGAVY 189

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +  +  +R I+LP   P   TG  T    AW   + +E+ +       T GLG  +++ 
Sbjct: 190 RLGAFALFRRILLPAALPQIFTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDG 243

Query: 547 TEKGSFPEVV 556
            E G    V 
Sbjct: 244 RETGRPDLVF 253



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 91/231 (39%), Gaps = 18/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P +I   +   + +  L ++   +TLR+ +                  SRR+  +L P
Sbjct: 69  PAPSEIFATLE-RMGLARLMRHVGASTLRVAAGFAAGAGLALAVGAAMGLSRRIDALLEP 127

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
               +++IP L ++   +++            E   I  I     + +  ++   +  + 
Sbjct: 128 SFQALRAIPSLAWVPVLLLWLGID--------EAPKITLIAIGAFFPVHLAVVAGIRGVD 179

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R L E+   +RL  +  F  + +P ++P +   +   +S  W F+VA+E+I         
Sbjct: 180 RKLVELGAVYRLGAFALFRRILLPAALPQIFTGLRTGLSLAWMFMVAAELIA------AT 233

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
            G+G  ++   +      +  A+L +  +  L D   + + R  + W + F
Sbjct: 234 RGLGFLLSDGRETGRPDLVFGAILLLALLGKLSDGAMRRIERRWLGWRDAF 284


>gi|282864846|ref|ZP_06273900.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282560271|gb|EFB65819.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 299

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 87/267 (32%), Gaps = 25/267 (9%)

Query: 11  ISRRIFPNI---FDLLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLP 62
             RR+ P     F  L   +++  +               + P  ++      L    L 
Sbjct: 41  TRRRLGPGRALPFGRLIGPVLLVAVWWAASASGHLDPRILSSPGTVLSTAADLLSTGRLQ 100

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R    +   +    V A  A  SR    +L   L I ++IP L  L   +++
Sbjct: 101 DNVLISLQRAGLGLFFGVTAGVVLAVAAGLSRSGEYLLDGPLQIKRAIPSLAMLPLLILW 160

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       E   +  I      NM  + Y SL  I     E++    L   Q    
Sbjct: 161 LGIG--------EQMKVTVIALGVAVNMYINTYASLTGIDSRYVELAEGLDLGRAQFIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP S+PG    + + ++  W  ++  E I          GIG  +  A +      I+
Sbjct: 213 VVVPGSLPGFFVGLRLGVTSSWLGLIVVEQI------NATSGIGYMMFQAQQYAQSDVII 266

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++      F  D   + + R ++ W
Sbjct: 267 VGLVAYGIFGFASDAAVRAIERKVLSW 293



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 89/255 (34%), Gaps = 15/255 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
             G  R   P   L          ++ ++W     G        S G +++  T  D+L 
Sbjct: 38  ARGTRRRLGPGRALPFGRLIGPVLLVAVWWAASASGHLDPRILSSPGTVLS--TAADLLS 95

Query: 379 VIWL---GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              L     I++ R  + +       + + +  G        +    Q+  A P+    P
Sbjct: 96  TGRLQDNVLISLQRAGLGLFFGVTAGVVLAVAAGLSRSGEYLLDGPLQIKRAIPSLAMLP 155

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +             ++  G    +  N  A  +   + + E+A    +   ++ R
Sbjct: 156 LLILWLGIG----EQMKVTVIALGVAVNMYINTYASLTGIDSRYVELAEGLDLGRAQFIR 211

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++PG  P +  G       +W   IV E  +       T+G+G  + ++ +      +
Sbjct: 212 KVVVPGSLPGFFVGLRLGVTSSWLGLIVVEQIN------ATSGIGYMMFQAQQYAQSDVI 265

Query: 556 VLGVLIMCCFVLALN 570
           ++G++    F  A +
Sbjct: 266 IVGLVAYGIFGFASD 280


>gi|225377016|ref|ZP_03754237.1| hypothetical protein ROSEINA2194_02660 [Roseburia inulinivorans DSM
           16841]
 gi|225211152|gb|EEG93506.1| hypothetical protein ROSEINA2194_02660 [Roseburia inulinivorans DSM
           16841]
          Length = 225

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 72/178 (40%), Gaps = 12/178 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSA 75
             +LAF+++  ++            P + + +  I+    L  H++  +   +  R+L  
Sbjct: 20  ISILAFLVIWQLVVSFTKAGMVLAGPIETLSMFVISIVKPLGTHTIEGHILWSLSRVLVG 79

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I  +   V   L    + +  +  PI +I++ IP + ++  ++V+F      K     
Sbjct: 80  FIIGSVLGIVLGILMGWFKPMSALFRPIFEILRPIPPIAWIPLSIVWFGLGESSKY---- 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               F I  S    +T + Y  + ++  +L   ++    +  Q F  + +P  +P + 
Sbjct: 136 ----FLIMYSAFCAVTMNAYSGVRSVDPELIGAAKMLGANNRQVFTTIVLPSCVPQIF 189



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 9/167 (5%)

Query: 346 IFWFCVVCGVAIGIAWQ-----SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           + W  VV     G+           ++++         +      ++ RV+V  II S++
Sbjct: 27  VIWQLVVSFTKAGMVLAGPIETLSMFVISIVKPLGTHTIEGHILWSLSRVLVGFIIGSVL 86

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I +GI +G+   +S+  +P  ++L   P   + PL +        +       L+++  
Sbjct: 87  GIVLGILMGWFKPMSALFRPIFEILRPIPPIAWIPLSIVWFGLGESSK----YFLIMYSA 142

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
              +  N  +G  +   +    A        + +  I+LP   P   
Sbjct: 143 FCAVTMNAYSGVRSVDPELIGAAKMLGANNRQVFTTIVLPSCVPQIF 189


>gi|220932982|ref|YP_002509890.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219994292|gb|ACL70895.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 272

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T   +L++ +++L    +   LAA++  +  ++ P+LD MQ++P   +L   V
Sbjct: 83  LWTQTIETLSMILTSGIVALSVGVLMGILAARNDYVDRIIRPVLDFMQTMPSFVYLIPAV 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F       V G     IF++  +            +  + +++ E +R+F  +  Q  
Sbjct: 143 IFFGME---MVPGVIATVIFSMPPA-----IRLTNLGIRQVDKEVIEAARAFGSTPKQIL 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  +  ++      VV + MI  G       G+G  +   I +  +  
Sbjct: 195 FKVQLPLAVPTIMAGINQTIMLSLSMVVIASMIGAG-------GLGGIVLRGITQLKIGL 247

Query: 241 ILYAMLTMLGVIFLYDQL 258
                L ++ +    D+L
Sbjct: 248 GFEGGLAVVILAIFLDRL 265



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 77/235 (32%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L +     +  +   +AW   G  V  FT    L ++ +        T+  ++   I+A
Sbjct: 42  LLFVVHPVAIIIILAALAWYLAGRGVAIFTIAGFLMIMGMDLWTQTIETLSMILTSGIVA 101

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +GI      ++   I+P    +   P+ V+    V       +   +   +   
Sbjct: 102 LSVGVLMGILAARNDYVDRIIRPVLDFMQTMPSFVYLIPAVIFFGMEMVPGVIATVIF-- 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +     G      +  E A +F  T  +    + LP   P  + G       +
Sbjct: 160 --SMPPAIRLTNLGIRQVDKEVIEAARAFGSTPKQILFKVQLPLAVPTIMAGINQTIMLS 217

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +   G       GLG  +     +        G L +    + L+R 
Sbjct: 218 LSMVVIASMIGAG-------GLGGIVLRGITQLKIGLGFEGGLAVVILAIFLDRL 265


>gi|303235143|ref|ZP_07321763.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
 gi|302493735|gb|EFL53521.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
          Length = 207

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 4/145 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            V+    ITM RVV   +IA ++ +P+G+ +G        +      L   P   + PL 
Sbjct: 67  QVMTNIGITMSRVVKGWLIAVLVGVPIGMAMGLSKIFEGILGGVVNSLRQIPMMAWVPLS 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             ++     + ++ N   G ++   D+   A S   +    +  +
Sbjct: 127 IIWLGIGDG----PTLFMIALNGVFQVIMNTSTGVASIDKDYYNAAKSMGASKASTFVNV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522
           ++P   P+ + GA  A G  W + I
Sbjct: 183 VVPASMPHILVGARLAIGAGWMSVI 207



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 74/187 (39%), Gaps = 8/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  ++V  I +  +        P+     +   +    +      T  R++   +I++L
Sbjct: 29  LIVLLIVWQIASTKIGIPLLLPTPKSTFTELYSNVTSSQVMTNIGITMSRVVKGWLIAVL 88

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+    +L  +++ ++ IP++ ++  ++++                +F 
Sbjct: 89  VGVPIGMAMGLSKIFEGILGGVVNSLRQIPMMAWVPLSIIWLGIGDGP--------TLFM 140

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + V+ +  +    + +I +D    ++S   S    F  + VP SMP ++    +++ 
Sbjct: 141 IALNGVFQVIMNTSTGVASIDKDYYNAAKSMGASKASTFVNVVVPASMPHILVGARLAIG 200

Query: 202 GGWFFVV 208
            GW  V+
Sbjct: 201 AGWMSVI 207


>gi|161523601|ref|YP_001578613.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|160341030|gb|ABX14116.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
          Length = 321

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A++I +P GI +G        + P  +     P   + PLVV       
Sbjct: 130 SAARVFGAFLLATVIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 188 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSLAQIVRHVVLPAALPE 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 246 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 299

Query: 566 VLALN 570
               +
Sbjct: 300 AWLFD 304



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++ +       L   SR    VL P+L+  + +P L +L   V
Sbjct: 123 LSEHLLWSAARVFGAFLLATVIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 182

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 183 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSLAQIV 234

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 235 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 288

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 289 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 320


>gi|309782195|ref|ZP_07676925.1| sulfonate ABC transporter, permease protein SsuC [Ralstonia sp.
           5_7_47FAA]
 gi|308919261|gb|EFP64928.1| sulfonate ABC transporter, permease protein SsuC [Ralstonia sp.
           5_7_47FAA]
          Length = 270

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 17/270 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N       +R+ P I  L+  VL            +    P D+            L  +
Sbjct: 12  NTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTH 71

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +T R L   VI          L    R    +L   L ++++IP+L  +   +++F 
Sbjct: 72  VAVSTWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFG 131

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + 
Sbjct: 132 ID--------ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVI 183

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  S+   W  ++ +E +          GIG     A +      +L  
Sbjct: 184 LPGALPQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLG 237

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
           +L    +  L D L   L R  + W   ++
Sbjct: 238 ILLYALLGKLADWLSRGLERYWLRWHPGYQ 267



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 17/229 (7%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CIT 386
             + QR++  +      V+   +    W S   +            +           ++
Sbjct: 16  RTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTHVAVS 75

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R ++  +I   + + +G+  G      + +    Q++   P     PLV+        
Sbjct: 76  TWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGI--- 132

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + I  N   G  +      E+A S+ ++  + +R +ILPG  P  
Sbjct: 133 -DESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGALPQI 191

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 192 LVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 234


>gi|161528791|ref|YP_001582617.1| binding-protein-dependent transporter inner membrane protein
           [Nitrosopumilus maritimus SCM1]
 gi|160340092|gb|ABX13179.1| binding-protein-dependent transport systems inner membrane
           component [Nitrosopumilus maritimus SCM1]
          Length = 252

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 10/201 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +    +M+R+ V + IA    I +GI++     ++  +      L + P+  + PL
Sbjct: 51  GSLFYGIATSMWRLAVGLAIAIAGGIVLGIFMARVEVVNQTVGSLVLGLQSIPSIAWVPL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +  +   G  + +  N   G       F E A +    G +    
Sbjct: 111 AILWFGLTDAG----IIFVTAIGAIFAVTINTYTGVKNINPHFIEAARNMGAKGSQLVTA 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P  FPY ++G       AW   I +E+           GLG  +          +V+
Sbjct: 167 VLIPAAFPYMISGFKQGWAFAWRGVIGAEIL------FSFLGLGFLLNAGRSLNDVSQVI 220

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
             +L++    LA++  ++  L
Sbjct: 221 AIMLVIMGIGLAVDGVVFKKL 241



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 95/242 (39%), Gaps = 15/242 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  I  +  L        P ++ + +       SL    + +  R+   + I++ 
Sbjct: 14  IGIIAVWQITAMTGLWPDNVFPSPYEVAEDLAYGAADGSLFYGIATSMWRLAVGLAIAIA 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V     A+   +   +  ++  +QSIP + ++   +++F     G +    + AIFA
Sbjct: 74  GGIVLGIFMARVEVVNQTVGSLVLGLQSIPSIAWVPLAILWFGLTDAGIIFVTAIGAIFA 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +        T + Y  + NI     E +R+    G Q    + +P + P ++       +
Sbjct: 134 V--------TINTYTGVKNINPHFIEAARNMGAKGSQLVTAVLIPAAFPYMISGFKQGWA 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  V+ +E++          G+G  +       D+  ++  ML ++G+    D ++F+
Sbjct: 186 FAWRGVIGAEIL------FSFLGLGFLLNAGRSLNDVSQVIAIMLVIMGIGLAVDGVVFK 239

Query: 262 PM 263
            +
Sbjct: 240 KL 241


>gi|145223746|ref|YP_001134424.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|145216232|gb|ABP45636.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
          Length = 293

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 12/251 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    I    P    ++     +  +  I     +    +      +     H      L
Sbjct: 29  RGRRSIWGRIPRPVRRMAGPVAILAVWTIGSTSGLLNTDLFPPPSDVAVTAWHLLTNGGL 88

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T  RV++   +   + + + +  G        +    Q+L A P     PL+
Sbjct: 89  ALHVGTSAT--RVLIGTALGITVGVVLAVLAGLTRTGEDLLDWSMQILKAVPNFALTPLL 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            +L+  G    +  N  +G         E+A +           +
Sbjct: 147 IIWMGIGEG----PKIVLITMGVAIAVYINTYSGIRGVDQQLVEMAQTLEARRGTLITQV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILPG  P ++ G       AW + I +E+ +       T G+G  ++ +     F   +L
Sbjct: 203 ILPGAMPNFLVGLRLGLSSAWLSLIFAEMIN------TTEGIGFLMSRAQTNLQFDVSLL 256

Query: 558 GVLIMCCFVLA 568
            ++I     LA
Sbjct: 257 VIVIYAVLGLA 267



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 76/212 (35%), Gaps = 14/212 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+       L    L  +   +  R+L    + +    V A LA  +R    +L  
Sbjct: 70  PPPSDVAVTAWHLLTNGGLALHVGTSATRVLIGTALGITVGVVLAVLAGLTRTGEDLLDW 129

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + I++++P        +++       K++   +    A++         + Y  +  + 
Sbjct: 130 SMQILKAVPNFALTPLLIIWMGIGEGPKIVLITMGVAIAVY--------INTYSGIRGVD 181

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + L E++++           + +P +MP  +  + + +S  W  ++ +EMI         
Sbjct: 182 QQLVEMAQTLEARRGTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMI------NTT 235

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            GIG  ++ A         L  ++    +   
Sbjct: 236 EGIGFLMSRAQTNLQFDVSLLVIVIYAVLGLA 267


>gi|317121395|ref|YP_004101398.1| binding-protein-dependent transporters inner membrane component
           [Thermaerobacter marianensis DSM 12885]
 gi|315591375|gb|ADU50671.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter marianensis DSM 12885]
          Length = 285

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 16/250 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRT 68
           I+R +      LLA    + I  +L+     T  P   V +  + L + +   +  A  T
Sbjct: 36  ITRALHAIEAGLLAVPWWLWIAGVLVAAWAVTRRPLTAVTLAGLMLAIGAFGYWEAAIET 95

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              ++ A+V+++ F        A+SRR+  +++P+LD MQ++P   +L   ++ F  L P
Sbjct: 96  LAMVIVAVVLAVAFGVPLGIAMAESRRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP 155

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  +    A     +  +   +   +  +P D +E +R+F  + WQ    + +P +
Sbjct: 156 -------VPGTLATVVYALPPVARLVDLGIRQVPADAQEAARAFGATRWQLLAQVRLPLA 208

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +       VV + M+  G       G+G  +  AI+  D  A   A  T+
Sbjct: 209 LPSIMAGINQTTMMALAMVVVASMVGAG-------GVGEAVMRAIQRVDPGAGFEAGFTI 261

Query: 249 LGVIFLYDQL 258
           + +  + D+L
Sbjct: 262 VALAIVMDRL 271



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 18/271 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
            + + +  L    G           +         +   +W  +     +  AW      
Sbjct: 13  WIQDGLAWLVARGGGFFHGVSVAITRALHAIEAGLLAVPWW--LWIAGVLVAAWAVTRRP 70

Query: 368 VNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +   T   ++  I           T+  V+V +++A    +P+GI +     + + + P 
Sbjct: 71  LTAVTLAGLMLAIGAFGYWEAAIETLAMVIVAVVLAVAFGVPLGIAMAESRRVHALVIPV 130

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              +   P+ V+   V+         P    +++        +   V  G    P D +E
Sbjct: 131 LDAMQTMPSFVYLIPVMMLFQALGPVPGTLATVVYALP---PVARLVDLGIRQVPADAQE 187

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +F  T W+    + LP   P  + G       A    +V+ +   G       G+G 
Sbjct: 188 AARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALAMVVVASMVGAG-------GVGE 240

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  + ++            +    + ++R 
Sbjct: 241 AVMRAIQRVDPGAGFEAGFTIVALAIVMDRL 271


>gi|289522180|ref|ZP_06439034.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504016|gb|EFD25180.1| glycine betaine/proline ABC transporter, permease/substrate-binding
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 282

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 104/232 (44%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L + I+ ++L    +  +    + I+P+ +    L   A  +   +L+A++ISLL     
Sbjct: 54  LYMIIVFVVLFTTTKKLIASLTLAILPLLIGAFGLWALAMESLAVVLTAVIISLLIGIPM 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A+     +V+ PILD MQ++P   +L   ++ F           ++ A+ A     
Sbjct: 114 GILMAEINSFAVVIRPILDGMQTMPSFVYLIPAMMLFGLG--------KVPAVLATLIYS 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       L ++P+++EE + ++  + WQ    + +P +MP ++  +  +       
Sbjct: 166 LPPVIRLTNMGLRHVPKNIEEAALAYGATKWQLLKEVRIPLAMPSILTGVNQTTMMALAM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + L+I   D+     A L+++ +  + D++
Sbjct: 226 VVVASMI-------GARGLGQEVLLSINRIDIGRGFEAGLSVVVMAIVIDRV 270



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 87/239 (36%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVV 392
           R++ +L +  + +   +   + + +   ++   T   +  +I       L   ++  V+ 
Sbjct: 42  RINEILLMVPWWLYMIIVFVVLFTTTKKLIASLTLAILPLLIGAFGLWALAMESLAVVLT 101

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +II+ +I IP+GI +      +  I+P    +   P+ V+    +           +  
Sbjct: 102 AVIISLLIGIPMGILMAEINSFAVVIRPILDGMQTMPSFVYLIPAMMLFGLG----KVPA 157

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L  +  +   ++     G    P + +E A ++  T W+  + + +P   P  +TG   
Sbjct: 158 VLATLIYSLPPVIRLTNMGLRHVPKNIEEAALAYGATKWQLLKEVRIPLAMPSILTGVNQ 217

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
               A    +V+ +           GLG  +  S  +          L +    + ++R
Sbjct: 218 TTMMALAMVVVASMIG-------ARGLGQEVLLSINRIDIGRGFEAGLSVVVMAIVIDR 269


>gi|146339331|ref|YP_001204379.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192137|emb|CAL76142.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 258

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 88/248 (35%), Gaps = 13/248 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W     G+       ++  +            +     ++ R+ +   +A    I
Sbjct: 16  GLLLAWQLASLGLKNDSFPTALESLRAIPPILTDKESLINILASLRRMAIGFALALAFSI 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G     ++   P   L+   P     P+++  +    ++     +L++  G   
Sbjct: 76  PLGLLMGRSRATAAFFNPLLMLIYPVPKAALMPIIMLWLGVGDVSK----TLVIFLGVSL 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++++   GA A         ++  ++       I+LP   P  +TG  T    A    +
Sbjct: 132 PVIYHSFEGAKAVEEKMLWSGAAMGLSPSERLLRIVLPAALPEILTGCRTGLVLALITMV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYL 579
            SE+ +      R +G G  +  + + G +  V   ++I+    + L+     +   L  
Sbjct: 192 TSEMIA------RQSGAGNILFNALDMGQYDTVFAMIIIVGAMGICLDAAFEIVRRWLVR 245

Query: 580 YGTRCLRL 587
           +      +
Sbjct: 246 WSEPQFDM 253



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 89/258 (34%), Gaps = 18/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +    +      +L   + ++ L      T    +  I PI  D  SL      +  RM 
Sbjct: 6   KPLAPVLACCGLLLAWQLASLGLKNDSFPTALESLRAIPPILTDKESLIN-ILASLRRMA 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++L F+     L  +SR       P+L ++  +P    +   +++       K + 
Sbjct: 65  IGFALALAFSIPLGLLMGRSRATAAFFNPLLMLIYPVPKAALMPIIMLWLGVGDVSKTL- 123

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   IF      + +  ++    +   +     +  LS  ++   + +P ++P ++
Sbjct: 124 -------VIFLGVSLPVIYHSFEGAKAVEEKMLWSGAAMGLSPSERLLRIVLPAALPEIL 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 +      +V SEMI          G G+ +  A+       +   ++ +  +  
Sbjct: 177 TGCRTGLVLALITMVTSEMIA------RQSGAGNILFNALDMGQYDTVFAMIIIVGAMGI 230

Query: 254 LYD---QLLFRPMIVWSN 268
             D   +++ R ++ WS 
Sbjct: 231 CLDAAFEIVRRWLVRWSE 248


>gi|257069581|ref|YP_003155836.1| ABC-type proline/glycine betaine transporter permease
           [Brachybacterium faecium DSM 4810]
 gi|256560399|gb|ACU86246.1| ABC-type proline/glycine betaine transport system, permease
           component [Brachybacterium faecium DSM 4810]
          Length = 303

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 77/197 (39%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +L A   ++L       LA+ +  +  ++ P++D MQ++P   +L   V 
Sbjct: 92  WETMMQTMALVLVATAFAVLIAVPLGVLASLNSTVSAIVKPVMDFMQTMPAFVYLIPAVT 151

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F            +  IFA     +          +  +  +  E   +F  + WQ   
Sbjct: 152 FFSIGV--------VPGIFATIIFALPPGVRMTELGIRQVDSETVEAGEAFGATPWQILR 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +       V + M+          G+G  +  AI  Q+L   
Sbjct: 204 GIQLPLAIPTIMAGVNQVIMLALSMAVVAGMV-------GADGLGKEVVQAISTQNLALG 256

Query: 242 LYAMLTMLGVIFLYDQL 258
           + A L+++ +    D+L
Sbjct: 257 VEAGLSVVVLAVFLDRL 273



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 91/275 (33%), Gaps = 15/275 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G  + +    L  N+  L      +     +N   L         + +F    +   + 
Sbjct: 14  VGEWADSAIDWLKANLSWLFDAFRTVMGFLVDNLTDLLLLVPALVAIPVFALIALTLRSW 73

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +A  ++       +      ++     TM  V+V    A +I +P+G+       +S+ 
Sbjct: 74  KLAVGTVISFALVLSMDQWETMMQ----TMALVLVATAFAVLIAVPLGVLASLNSTVSAI 129

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   PA V+    V+  S   +       +          +     G     +
Sbjct: 130 VKPVMDFMQTMPAFVYLIPAVTFFSIGVVPGIFATIIF----ALPPGVRMTELGIRQVDS 185

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E   +F  T W+  R I LP   P  + G       A + ++V+ +           
Sbjct: 186 ETVEAGEAFGATPWQILRGIQLPLAIPTIMAGVNQVIMLALSMAVVAGMVG-------AD 238

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  + ++    +    V   L +    + L+R 
Sbjct: 239 GLGKEVVQAISTQNLALGVEAGLSVVVLAVFLDRL 273


>gi|314936978|ref|ZP_07844325.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655597|gb|EFS19342.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 504

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 82/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +           A+ I++L          K++RL  V++ I  ++Q+IP L  L  
Sbjct: 13  GELLRTIFEHIQISFIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------KVPAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  L+D  + R M   S K
Sbjct: 173 DRNNTALILIGAIPAALLAILFD-FILRYMAKLSYK 207



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 12/194 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+GI +     +S  +   A +L   P+     L++           +
Sbjct: 27  FIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGLMIPIFGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNTALILIGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRC 584
            F+   +     + 
Sbjct: 196 -FILRYMAKLSYKK 208


>gi|146341196|ref|YP_001206244.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146194002|emb|CAL78019.1| putative sulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. ORS278]
          Length = 285

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 94/284 (33%), Gaps = 19/284 (6%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG------I 359
               +  ++    + G          L   + Q +S++  +    V   +A G      +
Sbjct: 4   LEQAAGTIELPQASQGARSGAGRRRALSPTALQALSWLAPLLLIVVWEALAQGGYLSPQV 63

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
                  +           ++    +++ R      I       +GI +GF     + I 
Sbjct: 64  LPAPSKIVRTAVKLTTQGTLLNDLGVSLLRAAAGFAIGGAAGFALGILVGFSAVAEALID 123

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
              Q++ A P     PLV+  +             L+  G  + I  N   G        
Sbjct: 124 RSIQMIRAIPFLAVLPLVIVWLGVGEAEK----VFLVALGVTFPIYINTTLGIRQVDPKL 179

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E+     ++  +  R IILPG  P  +TG   A   AW A +V+E           +GL
Sbjct: 180 IELGRVQDLSTLQLIRRIILPGALPSILTGVRYALATAWLALVVAETIG------AQSGL 233

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           G    ++ E      +VL ++I     +  +   R+L   L  +
Sbjct: 234 GFLAMDAREFLRTDVIVLTIVIYALIGVGADLIARWLERRLLAW 277



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  ++V   +    +   +    P  IV          +L      + LR  +   I   
Sbjct: 44  LLLIVVWEALAQGGYLSPQVLPAPSKIVRTAVKLTTQGTLLNDLGVSLLRAAAGFAIGGA 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    L   S     ++   + ++++IP L  L   +V+            E   +F 
Sbjct: 104 AGFALGILVGFSAVAEALIDRSIQMIRAIPFLAVLPLVIVWLGVG--------EAEKVFL 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    +  +   L E+ R   LS  Q    + +P ++P ++  +  +++
Sbjct: 156 VALGVTFPIYINTTLGIRQVDPKLIELGRVQDLSTLQLIRRIILPGALPSILTGVRYALA 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  +V +E I          G+G     A +      I+  ++    +    D +   
Sbjct: 216 TAWLALVVAETIG------AQSGLGFLAMDAREFLRTDVIVLTIVIYALIGVGADLIARW 269

Query: 259 LFRPMIVWSNKF 270
           L R ++ W   +
Sbjct: 270 LERRLLAWHPNY 281


>gi|329906592|ref|ZP_08274444.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327547230|gb|EGF32082.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 277

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 10/192 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +     +     ++    I++ RV    ++++I+ IP+G+ IG    + + ++P     
Sbjct: 65  VLRRCLDWLLNDDLMSDVGISIGRVFGGFLLSAILAIPIGVMIGTYAPVRALLEPLTDFS 124

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA  F PL++  V             ++  GT + ++  +    +  PN   E A +
Sbjct: 125 RYLPAVAFIPLIMLWVGI----DESAKLTVIFVGTFFQMVLMLAEDIALVPNQPVEAART 180

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T     R +++P   P  +       G AW   +V+E+ +        +GLG  I +
Sbjct: 181 MGATNSEIVRLVLIPAARPAMLDTLRQTMGLAWTYLVVAELVA------ANSGLGFSILK 234

Query: 546 STEKGSFPEVVL 557
           +       ++  
Sbjct: 235 AQRFLQTDKIFA 246



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 95/264 (35%), Gaps = 24/264 (9%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           + N    +  R   P+   ++A  +   ++  L   I  T+   D V +    L +    
Sbjct: 12  IRNRRSSWAVRGQLPHRI-VVALAITGFLLPFLFWLILSTSGRIDPVFLPTPELVLRRCL 70

Query: 63  QYASR---------TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            +            +  R+    ++S +       +      +  +L P+ D  + +P +
Sbjct: 71  DWLLNDDLMSDVGISIGRVFGGFLLSAILAIPIGVMIGTYAPVRALLEPLTDFSRYLPAV 130

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F+   +++            E A +  IF    + M   + + +  +P    E +R+  
Sbjct: 131 AFIPLIMLWVGID--------ESAKLTVIFVGTFFQMVLMLAEDIALVPNQPVEAARTMG 182

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +  +    + +P + P ++  +  +M   W ++V +E++          G+G  I  A 
Sbjct: 183 ATNSEIVRLVLIPAARPAMLDTLRQTMGLAWTYLVVAELVAANS------GLGFSILKAQ 236

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQ 257
           +      I   +L +  +  L DQ
Sbjct: 237 RFLQTDKIFAGILLIGLIGLLTDQ 260


>gi|291459257|ref|ZP_06598647.1| binding-protein-dependent transport system inner membrane component
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418511|gb|EFE92230.1| binding-protein-dependent transport system inner membrane component
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 352

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D  Y++     +++ +        +  +  GI  G+   I+  I+PF +LL A P+  +
Sbjct: 146 SDRGYLLQCTLSSLYLLFCGYFSGLLAGLVSGIACGYNQRINYWIEPFMKLLGAIPSTTW 205

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+V+        +       ++  G  + I  + I G       + E A +   +G + 
Sbjct: 206 IPIVLVL----SASLFRGSVFIIALGVWFSITLSTITGIRNIDKSYYEAARTLGASGVQL 261

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            + + +P   P    G I A   A  A +V+E+          +GLG YI        + 
Sbjct: 262 IKNVAIPSAVPSIFQGMIQAMSSACTALLVAEMIG------VESGLGWYITWQKSWAEYG 315

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++   ++++C   + +N  L
Sbjct: 316 KMYGAIILICLIFVGVNFIL 335



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 16/243 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAM 76
            F  L F+L++    + L            VD +   +  D   L Q    +   +    
Sbjct: 107 PFRALVFLLLLFYDVLTLKSGILLMPYFPWVDRILNAMISDRGYLLQCTLSSLYLLFCGY 166

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
              LL   V       ++R+   + P + ++ +IP   ++   +V   +L+ G       
Sbjct: 167 FSGLLAGLVSGIACGYNQRINYWIEPFMKLLGAIPSTTWIPIVLVLSASLFRG------- 219

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            ++F I     +++T S    + NI +   E +R+   SG Q    + +P ++P +   M
Sbjct: 220 -SVFIIALGVWFSITLSTITGIRNIDKSYYEAARTLGASGVQLIKNVAIPSAVPSIFQGM 278

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           + +MS     ++ +EMI V        G+G YI       +   +  A++ +  +    +
Sbjct: 279 IQAMSSACTALLVAEMIGVES------GLGWYITWQKSWAEYGKMYGAIILICLIFVGVN 332

Query: 257 QLL 259
            +L
Sbjct: 333 FIL 335


>gi|2440148|emb|CAA88423.1| ABC-type transporter, putative membrane subunit [Pseudomonas
           aeruginosa PAO1]
          Length = 537

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/540 (12%), Positives = 149/540 (27%), Gaps = 76/540 (14%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
               +     ++V      L    L    +    R+   ++  +            S R 
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSELAIHLRRLAWGLLAGVASGAALGAWLGFSPRA 115

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
             ++ P    +  IP L ++   +++F           EL  +  +  + V  +T     
Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +    L E +   RL      W L +P ++P  +  + ++++ GW  ++A E++   
Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +      GIG  +    +   L  +   +L +  V    D+ +      W ++       
Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI-----QWLDR------- 269

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                             L +   ++               R   +  +  P   L L  
Sbjct: 270 ----------------RLLHWPQAATGRI-----PPAPAGTRLAALQVWLPPLALLLLWQ 308

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
           +   +  +D         VA    W             D L     G  +   +  L  +
Sbjct: 309 SASSAEWVDPAILASPLEVAR-ATWSGALDGSLPGALFDSLNARSAGSCSGGGLGFLGGL 367

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
              +W P                P    L +     + PL+ +                +
Sbjct: 368 LLGLWRP----------AERFFGPTFAALRS-AIFAWVPLLTAWFGLG----EPAKLTFV 412

Query: 457 IFGTQWYILFNVIAGASAFP----NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
                + +L     G ++            A         W   +      P      I 
Sbjct: 413 AIAAFFPLLLATQRGIASLRRASARRPGSCAWVPGDGCSGWSCRVPPRRCSPASAWLLI- 471

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               AW  +I +E            G+G+ +  + +      +  G+L++      LN  
Sbjct: 472 ---YAWLGTIGAEHFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 523



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 79/226 (34%), Gaps = 17/226 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W          + WQS   ++    + ++        I + R+   ++        +G W
Sbjct: 56  WMSAQVLPTPELVWQSARELLAGELWSEL-------AIHLRRLAWGLLAGVASGAALGAW 108

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +GF P     + P    LA  P   + PL +       L   + L   ++         +
Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G        +E A+   +        +ILP   P ++TG   A    W + +  E+ 
Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       + G+G  + +  +      V + +LI+    + ++R +
Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI 264



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 27/236 (11%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++           SLP     +     +         F+   L    R       
Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLNARSAGSCSGGGLGFLGGLLLGLWRPAERFFG 380

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN- 160
           P    ++S  I  ++     +F    P K+    +AA F +  +    +      S    
Sbjct: 381 PTFAALRS-AIFAWVPLLTAWFGLGEPAKLTFVAIAAFFPLLLATQRGIASLRRASARRP 439

Query: 161 -----IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
                +P D          SGW     +      P   W ++      W   + +E  + 
Sbjct: 440 GSCAWVPGD--------GCSGWSC--RVPPRRCSPASAWLLI----YAWLGTIGAEHFMP 485

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            D      GIGS +  A +   +  I   ML +     L +  L + +   + ++R
Sbjct: 486 SD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 535


>gi|187928305|ref|YP_001898792.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|187725195|gb|ACD26360.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
          Length = 270

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 17/270 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           N       +R+ P I  L+  VL            +    P D+            L  +
Sbjct: 12  NTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTH 71

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +T R L   VI          L    R    +L   L ++++IP+L  +   +++F 
Sbjct: 72  VAVSTWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFG 131

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + 
Sbjct: 132 ID--------ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVI 183

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  S+   W  ++ +E +          GIG     A +      +L  
Sbjct: 184 LPGALPQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLG 237

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
           +L    +  L D L   L R  + W   ++
Sbjct: 238 ILLYALLGKLADWLSRGLERYWLRWHPGYQ 267



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 17/229 (7%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CIT 386
             + QR++  +      V+   +    W S   +            +           ++
Sbjct: 16  RTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTHVAVS 75

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R ++  +I   + + +G+  G      + +    Q++   P     PLV+        
Sbjct: 76  TWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGI--- 132

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + I  N   G  +      E+A S+ ++  + +R +ILPG  P  
Sbjct: 133 -DESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGALPQI 191

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           + G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 192 LVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 234


>gi|170748181|ref|YP_001754441.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170654703|gb|ACB23758.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 282

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+    +A++  IP G+ +G        + P  +     P   + PL++       
Sbjct: 91  SLLRVLGAFALAALFGIPAGLAMGTSRIARGILDPPIEFYRPLPPLAYLPLMIIWFGIGE 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      LL+       +     AG  +   D    A +   + W+  R+++ P   P 
Sbjct: 151 LSK----VLLIFLACFAPVALAARAGVRSASLDQINAARALGASRWQVLRHVVFPAALPE 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G  W   + +E+ +         GLG  +  ++       V++G+L++  F
Sbjct: 207 ILIGLRIGMGVGWTTLVAAEMVA------AQAGLGQLVLNASNFLRTDVVLMGILVIGLF 260

Query: 566 VLALN 570
                
Sbjct: 261 AGLFE 265



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 17/218 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            +D   L  +   + LR+L A  ++ LF          SR    +L P ++  + +P L 
Sbjct: 78  EIDGAPLGLHIGDSLLRVLGAFALAALFGIPAGLAMGTSRIARGILDPPIEFYRPLPPLA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   +++F           EL+ +  IF +    +  +    + +   D    +R+   
Sbjct: 138 YLPLMIIWFGIG--------ELSKVLLIFLACFAPVALAARAGVRSASLDQINAARALGA 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S WQ   ++  P ++P ++  + + M  GW  +VA+EM+          G+G  +  A  
Sbjct: 190 SRWQVLRHVVFPAALPEILIGLRIGMGVGWTTLVAAEMVA------AQAGLGQLVLNASN 243

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
                 +L  +L +     L++   + L R ++ W  +
Sbjct: 244 FLRTDVVLMGILVIGLFAGLFELGMRALERVLVPWKGR 281


>gi|330505546|ref|YP_004382415.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328919832|gb|AEB60663.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 264

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 10/162 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G        +    Q++   P     PLV+                L+  GT + I  N 
Sbjct: 89  GLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DEAAKVFLVALGTLFPIYLNT 144

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E+A S+ ++G+  +R +ILPG  P  + G   A G  W   IV+E  S
Sbjct: 145 YHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWLTLIVAETIS 204

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                  ++G+G     + E      VVL +L+        +
Sbjct: 205 ------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 96/255 (37%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  +    +         +    P  ++      L    + Q+ + +  R      I   
Sbjct: 20  LGLLAAWQLAVASGWLSSRILPAPSAVLAAGWELLASGEIWQHLAISGQRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   S+     L   + +++++P L  +   +++F           E A +F 
Sbjct: 80  IGLLLGFITGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--------EAAKVFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A+L    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYAVLGKLADVAARG 245

Query: 259 LFRPMIVWSNKFRLE 273
           L R  + W   ++ +
Sbjct: 246 LERVWLRWHPAYQAK 260


>gi|302541799|ref|ZP_07294141.1| ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459417|gb|EFL22510.1| ABC transporter, permease [Streptomyces himastatinicus ATCC 53653]
          Length = 307

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 99/253 (39%), Gaps = 11/253 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++ P +  ++  + +  +   L      +   P D+   +       +L  Y   +  R 
Sbjct: 52  KVLPPVVAIVIVLALWQLAYTLELKPHYQLPSPVDVGHSLQEKWLDGTLLGYVWHSVSRG 111

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                 SL+       L A+ R +   + PIL  +QS+P + ++   +++F         
Sbjct: 112 ALGFAASLVIGTPLGLLVARVRFVRAAIGPILSGLQSLPSVAWVPAAIIWFGL------- 164

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +      +    V ++   +   +  I        R+   +G     ++ +P ++PG 
Sbjct: 165 -TDSTIYAVVLLGAVPSIANGLVSGVDQISPLYLRAGRTLGATGVAGVRHILLPAALPGY 223

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +    +  W  ++A+E+I     +    G+G  +  A  +QD+  +L A+L +L V 
Sbjct: 224 IAGLKQGWAFSWRSLMAAELIATSPDLGT--GLGQLLDQARVDQDMSLVLAAILLILVVG 281

Query: 253 FLYDQLLFRPMIV 265
              + L+F P+  
Sbjct: 282 IGIELLIFAPIER 294



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 91/252 (36%), Gaps = 21/252 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYI-------------VNHFTYQDVLYVIWLGCI--TM 387
           +LD     VV  V +   WQ    +             V H   +  L    LG +  ++
Sbjct: 49  LLDKVLPPVVAIVIVLALWQLAYTLELKPHYQLPSPVDVGHSLQEKWLDGTLLGYVWHSV 108

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R  +    + +I  P+G+ +     + + I P    L + P+  + P  +         
Sbjct: 109 SRGALGFAASLVIGTPLGLLVARVRFVRAAIGPILSGLQSLPSVAWVPAAIIWFGLTDST 168

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +  +++ G    I   +++G       +     +   TG    R+I+LP   P Y+
Sbjct: 169 ----IYAVVLLGAVPSIANGLVSGVDQISPLYLRAGRTLGATGVAGVRHILLPAALPGYI 224

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       +W + + +E+ +        TGLG  + ++        V+  +L++    +
Sbjct: 225 AGLKQGWAFSWRSLMAAELIATSPDL--GTGLGQLLDQARVDQDMSLVLAAILLILVVGI 282

Query: 568 ALNRFLWHPLYL 579
            +   ++ P+  
Sbjct: 283 GIELLIFAPIER 294


>gi|164685928|ref|ZP_01946271.2| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165924092|ref|ZP_02219924.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein [Coxiella
           burnetii RSA 334]
 gi|212218020|ref|YP_002304807.1| glycine betaine transport system permease protein [Coxiella
           burnetii CbuK_Q154]
 gi|164601450|gb|EAX33180.2| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165916469|gb|EDR35073.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein [Coxiella
           burnetii RSA 334]
 gi|212012282|gb|ACJ19662.1| glycine betaine transport system permease protein [Coxiella
           burnetii CbuK_Q154]
          Length = 526

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 19/218 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  +  I   +L    L ++   +    LSA +++++      T+      L   ++
Sbjct: 1   MSTPTGMFLINNASLLGVKLLEHLYLS----LSATLLAIIIGIPLGTVILNRPALKNTVL 56

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  I Q+IP L  L F + +    +           I  +    +  +  + +  L  +
Sbjct: 57  SVTSIFQTIPSLALLVFLIPFIGIGF--------KPTIVTLTLYALLPIIRNTFMGLTGV 108

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +  E +R+   + WQ+   + +P ++P +V  +  + +        +  I  G     
Sbjct: 109 PPESVEAARAMGFTRWQRLRLVELPLALPIIVAGIRTATAMTIGITTIAAFIGAG----- 163

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G +I   +   D   IL   +    +    D ++
Sbjct: 164 --GLGDFITQGLSLNDPRLILLGAIPTALLAIALDFIM 199



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +   ++A II IP+G  I  RP + + +     +    P+      ++  +     
Sbjct: 24  LYLSLSATLLAIIIGIPLGTVILNRPALKNTVLSVTSIFQTIPSLALLVFLIPFIGIGFK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      I+ N   G +  P +  E A +   T W+  R + LP   P  
Sbjct: 84  PTIVTLTLYALL----PIIRNTFMGLTGVPPESVEAARAMGFTRWQRLRLVELPLALPII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G  TA       + ++     G       GLG +I +         ++LG +      
Sbjct: 140 VAGIRTATAMTIGITTIAAFIGAG-------GLGDFITQGLSLNDPRLILLGAIPTALLA 192

Query: 567 LALN 570
           +AL+
Sbjct: 193 IALD 196


>gi|111220074|ref|YP_710868.1| alkanesulfonate ABC transporter membrane protein [Frankia alni
           ACN14a]
 gi|111147606|emb|CAJ59261.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 267

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 93/251 (37%), Gaps = 17/251 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F L   +  + L   +    P  ++D          L      +  R+ + ++  +  
Sbjct: 28  LLFALWWAVTGLDLVSDRALASPAAVLDAARELWRNGDLVDSLGASLYRVGAGVLFGVGI 87

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A +A   R    V+   ++ +++IP++  L   +V+            E A IF I
Sbjct: 88  GLALAVVAGFFRTASDVVDSAMNFLRTIPVIALLPLIIVWIGIG--------ESAKIFLI 139

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  + Y ++  +   L E  ++F L  +     + VP + PG +  +  ++  
Sbjct: 140 TVGVAFPIYMNTYAAIRGVDARLVEAGQTFGLGRFGLVRSVIVPAAAPGFLVGLRWALGV 199

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
            W  +V +E +          G+G  +  A        I+  ++    +  + D   +LL
Sbjct: 200 AWLLLVFAEQV------NTDSGLGYLLNSAQSWNRTDIIVLCLVVYGILGLVSDGLVRLL 253

Query: 260 FRPMIVWSNKF 270
            R ++ W   F
Sbjct: 254 ERMLLSWRRGF 264



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++RV   ++    I + + +  GF    S  +      L   P     PL++  +  
Sbjct: 71  GASLYRVGAGVLFGVGIGLALAVVAGFFRTASDVVDSAMNFLRTIPVIALLPLIIVWIGI 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + I  N  A          E   +F +  +   R +I+P   
Sbjct: 131 G----ESAKIFLITVGVAFPIYMNTYAAIRGVDARLVEAGQTFGLGRFGLVRSVIVPAAA 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++ G   A G AW   + +E  +        +GLG  +  +        +VL +++  
Sbjct: 187 PGFLVGLRWALGVAWLLLVFAEQVN------TDSGLGYLLNSAQSWNRTDIIVLCLVVYG 240

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 241 ILGLVSDGLV 250


>gi|294676451|ref|YP_003577066.1| glycine betaine/L-proline ABC transporter permease ProW
           [Rhodobacter capsulatus SB 1003]
 gi|294475271|gb|ADE84659.1| glycine betaine/L-proline ABC transporter, permease protein ProW-1
           [Rhodobacter capsulatus SB 1003]
          Length = 338

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +   ++SA V+ +         AA   RL + + PILD+MQ++P   +L   +V+F 
Sbjct: 153 TTESLTLVISACVVCMSLGVPIGIAAAHRPRLYLAMQPILDLMQTLPTFVYLIPAIVFFG 212

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     IF +            +  +   P+ L E +R+F  +  Q  W + 
Sbjct: 213 ---IGMVPGLIATVIFVLPAP-----IRLTHLGVSTTPQPLLEAARAFGATPRQVLWKVE 264

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+++P ++  +  ++      VV + ++          G+G  +  A+   +      +
Sbjct: 265 LPYALPQIMAGLNQTIMLSLSMVVIAALVGAN-------GLGVPVVRALNSVNTALGFES 317

Query: 245 MLTMLGVIFLYDQLL 259
            + ++ V  + D+++
Sbjct: 318 GMIIVVVAIVLDRMM 332



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V+   ++   + +P+GI    RP +   +QP   L+   P  V+    +       
Sbjct: 156 SLTLVISACVVCMSLGVPIGIAAAHRPRLYLAMQPILDLMQTLPTFVYLIPAIVFFGIGM 215

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   + ++      I      G S  P    E A +F  T  +    + LP   P 
Sbjct: 216 VPGLIATVIFVLPA---PIRL-THLGVSTTPQPLLEAARAFGATPRQVLWKVELPYALPQ 271

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +        +I+   
Sbjct: 272 IMAGLNQTIMLSLSMVVIAALVG-------ANGLGVPVVRALNSVNTALGFESGMIIVVV 324

Query: 566 VLALNRFL 573
            + L+R +
Sbjct: 325 AIVLDRMM 332


>gi|302532457|ref|ZP_07284799.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302441352|gb|EFL13168.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 276

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 10/181 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V  ++A+++ + VG  +      +  + P  +++   PA    P+ +  +    
Sbjct: 63  SLRRIGVGFVLAAVLGVAVGTAVARSRWAADLLGPLVEVVRPVPAIALVPVAILLLP--- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +      + +  +      A    ++E   +      R    ++LPG  P 
Sbjct: 120 -TNEQGIVFITFAAAFFPVAVSTRHAVRALTPVWEEAVLTMGGGRARVLFSVVLPGALPG 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +W   I +E+ S  +      G+G    +      +P V +G+  +   
Sbjct: 179 IFGGLSVGIGVSWICVISAEMISGEY------GVGYRTWQDYTVVDYPGVFVGMTTIGAL 232

Query: 566 V 566
            
Sbjct: 233 G 233



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 82/227 (36%), Gaps = 17/227 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    +  R+    V++ +      T  A+SR    +L P++++++ +P +  +   ++
Sbjct: 57  WQDLGHSLRRIGVGFVLAAVLGVAVGTAVARSRWAADLLGPLVEVVRPVPAIALVPVAIL 116

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                        E   +F  F +  + +  S   ++  +    EE   +      +  +
Sbjct: 117 LL--------PTNEQGIVFITFAAAFFPVAVSTRHAVRALTPVWEEAVLTMGGGRARVLF 168

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++PG+   + + +   W  V+++EMI          G+G          D   +
Sbjct: 169 SVVLPGALPGIFGGLSVGIGVSWICVISAEMISG------EYGVGYRTWQDYTVVDYPGV 222

Query: 242 LYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWV 285
              M T+  + +L      LL R    W  +      +      + V
Sbjct: 223 FVGMTTIGALGWLTSTAVELLGRRATAWLPRPTTRTGSRAAAPRTAV 269


>gi|288573734|ref|ZP_06392091.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569475|gb|EFC91032.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 263

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  RV +  + A +  IP+G+  G  P + S +      L + P   + PL +      
Sbjct: 70  ASTGRVAMGFVAAVVFGIPMGVVSGRVPIVRSLLGTTVNGLRSVPGISWLPLAMVWFGVG 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+   + + +  N   GA        +V ++  +   R    I+LP   P
Sbjct: 130 ----MKTTVFLVALASFFPVYVNTAIGAGNVDFILYQVGATMGVGRIRGVFDILLPAAMP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G     G +W   ++ E+           GLGA I ++   G    +++G++++  
Sbjct: 186 QIMSGLRLGLGTSWAYLVLGEL------TGVPFGLGALIMDARMMGRIDMIIVGIVVIAA 239

Query: 565 FVLALNRFL 573
                +  L
Sbjct: 240 MGRLSDLLL 248



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 81/195 (41%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            S +T R+    V +++F      ++ +   +  +L   ++ ++S+P + +L   +V+F 
Sbjct: 68  LSASTGRVAMGFVAAVVFGIPMGVVSGRVPIVRSLLGTTVNGLRSVPGISWLPLAMVWFG 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         +F +  +  + +  +      N+   L +V  +  +   +  + + 
Sbjct: 128 VGM--------KTTVFLVALASFFPVYVNTAIGAGNVDFILYQVGATMGVGRIRGVFDIL 179

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  + + +   W ++V      +G+      G+G+ I  A     +  I+  
Sbjct: 180 LPAAMPQIMSGLRLGLGTSWAYLV------LGELTGVPFGLGALIMDARMMGRIDMIIVG 233

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  +  L D LL
Sbjct: 234 IVVIAAMGRLSDLLL 248


>gi|260575920|ref|ZP_05843915.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2]
 gi|259021846|gb|EEW25147.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2]
          Length = 312

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 99/234 (42%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I +   L +G+Q +     +V    + +      +  + +   +LSA V+ +     
Sbjct: 89  LVIIALAVGLTYGLQRSWKTALLVFAGFLFILNQGYWEETTESLTLVLSACVVCMGLGVP 148

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL   +VP+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 149 IGIAAAHRPRLYAWMVPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 205

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  +   P+ L E + +F  +  Q+ W + +P++ P ++  +  ++     
Sbjct: 206 -----IRLTHLGISTTPQPLLEAATAFGATPRQRLWKVELPYAFPQIMAGLNQTIMLSLS 260

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   +      + + ++ V  + D++L
Sbjct: 261 MVVIAALVGAN-------GLGVPVVRALNSVNTALGFESGMIIVVVAIILDRML 307



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 89/276 (32%), Gaps = 14/276 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G  +   F  L  N   L  TL             +    +    L I    V     +
Sbjct: 46  VGKLAKTVFDWLKANAAPLFDTLSAW---MEALITAILWLLQTPPPLVIIALAVGLTYGL 102

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +W++   +   F +            ++  V+   ++   + +P+GI    RP + + 
Sbjct: 103 QRSWKTALLVFAGFLFILNQGYWEETTESLTLVLSACVVCMGLGVPIGIAAAHRPRLYAW 162

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P   L+   P  V+    +       +   +   + ++      I      G S  P 
Sbjct: 163 MVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIRL-THLGISTTPQ 218

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A++F  T  +    + LP  FP  + G       + +  +++ +           
Sbjct: 219 PLLEAATAFGATPRQRLWKVELPYAFPQIMAGLNQTIMLSLSMVVIAALVG-------AN 271

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  +  +    +        +I+    + L+R L
Sbjct: 272 GLGVPVVRALNSVNTALGFESGMIIVVVAIILDRML 307


>gi|228475293|ref|ZP_04060017.1| choline transporter [Staphylococcus hominis SK119]
 gi|228270669|gb|EEK12083.1| choline transporter [Staphylococcus hominis SK119]
          Length = 504

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 82/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +           A+ I++L          K++RL  V++ I  ++Q+IP L  L  
Sbjct: 13  GELLRTIFEHIQISFIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------KVPAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  L+D  + R M   S K
Sbjct: 173 DRNNTALILIGAIPAALLAILFD-FILRYMAKLSYK 207



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 12/194 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+GI +     +S  +   A +L   P+     L++           +
Sbjct: 27  FIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGLMIPIFGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNTALILIGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRC 584
            F+   +     + 
Sbjct: 196 -FILRYMAKLSYKK 208


>gi|147676572|ref|YP_001210787.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease
           component [Pelotomaculum thermopropionicum SI]
 gi|146272669|dbj|BAF58418.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease
           component [Pelotomaculum thermopropionicum SI]
          Length = 259

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 10/230 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +    +G + N  T       +     +M RVVV   I+  + + +G+ I    ++   
Sbjct: 37  YLFPSPVGVLQNLVTGFQDSTFLIAIGASMKRVVVGYSISLAVGLSLGLLIVSSRYLDET 96

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L   P+  + PL +        +    +  ++  G+ + +    ++G    P 
Sbjct: 97  LSPLLLGLQTLPSICWLPLAILWFGLGEDS----IIFVIAIGSIFSVTMGTLSGIKNVPP 152

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +  VA +    G + +  +++P  FP  + G       AW A +  E+ S         
Sbjct: 153 IYMRVAKTMGAKGLKAYTTVVIPAAFPAIIGGMKQGWSFAWRALMAGELLS------PKD 206

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GLG  +    +     +VV  ++I+    L +++F++  +         L
Sbjct: 207 GLGYVLTIGRDLHDMNQVVGVMIIIIIIGLIIDKFIFGRIEHSIRSRWGL 256



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 94/239 (39%), Gaps = 14/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    +  G+    L        P  ++  +       +       +  R++    ISL 
Sbjct: 19  LALIAIWEGVFRAGLWPEYLFPSPVGVLQNLVTGFQDSTFLIAIGASMKRVVVGYSISLA 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   SR L   L P+L  +Q++P + +L   +++F           E + IF 
Sbjct: 79  VGLSLGLLIVSSRYLDETLSPLLLGLQTLPSICWLPLAILWFGLG--------EDSIIFV 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    ++++T      + N+P     V+++    G + +  + +P + P ++  M    S
Sbjct: 131 IAIGSIFSVTMGTLSGIKNVPPIYMRVAKTMGAKGLKAYTTVVIPAAFPAIIGGMKQGWS 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A E++   D      G+G  + +     D+  ++  M+ ++ +  + D+ +F
Sbjct: 191 FAWRALMAGELLSPKD------GLGYVLTIGRDLHDMNQVVGVMIIIIIIGLIIDKFIF 243


>gi|163744407|ref|ZP_02151767.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161381225|gb|EDQ05634.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 268

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 10/242 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P     +     V  +L   W      ++     +    ++          +      ++
Sbjct: 21  PGTRRGVGLAVFVVLILLAEWGTRSDFISALTLPRPSDVLLTFQELYQSGMLFKHLGPSL 80

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+ +  +I + + I +G+ IG      + + P    +   P     PL V       ++
Sbjct: 81  SRLAIGALIGASLGIGIGVLIGLFSLARAGLVPLVAAIFPIPKIALLPLFVIWFGIDEMS 140

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+ FGT    +    A           +  SF +  W     I++PG  P  +
Sbjct: 141 K----YALIAFGTFTPTVVATYAAVDNVDRVLIRMGQSFGLGWWSIVSKIVVPGAMPGIL 196

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   +   A    + +E+           G+GAYI ++        +  GV+I+    +
Sbjct: 197 SGLRISLTIAIILLVAAEMLG------AEYGIGAYILQAGSLYDLERLFAGVVILSLLGV 250

Query: 568 AL 569
           A+
Sbjct: 251 AV 252



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 98/263 (37%), Gaps = 18/263 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
             P   R +   +F +L  +   G  +  +  +     P D++           L ++  
Sbjct: 19  FQPGTRRGVGLAVFVVLILLAEWGTRSDFISALT-LPRPSDVLLTFQELYQSGMLFKHLG 77

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+    +I          L          LVP++  +  IP +  L   V++F   
Sbjct: 78  PSLSRLAIGALIGASLGIGIGVLIGLFSLARAGLVPLVAAIFPIPKIALLPLFVIWFGID 137

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E++    I          + Y ++ N+ R L  + +SF L  W     + VP
Sbjct: 138 --------EMSKYALIAFGTFTPTVVATYAAVDNVDRVLIRMGQSFGLGWWSIVSKIVVP 189

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MPG++  + +S++     +VA+EM+          GIG+YI  A    DL  +   ++
Sbjct: 190 GAMPGILSGLRISLTIAIILLVAAEMLG------AEYGIGAYILQAGSLYDLERLFAGVV 243

Query: 247 TMLGVIFLYDQL---LFRPMIVW 266
            +  +      +   + R ++ W
Sbjct: 244 ILSLLGVAVSSVVAAIERRVLSW 266


>gi|327440082|dbj|BAK16447.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 256

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 85/223 (38%), Gaps = 15/223 (6%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQD-----VLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
              V     W +        T  +     +  ++     +M  ++     A +  I  G+
Sbjct: 22  WALVTKYATWINPIIFPQPLTVIESFSAKIGELVTGVVSSMKLLIPGFFGALVTGIVGGL 81

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           + G        + P+   L+  P  +F P V++ +  +          L+  G  W +  
Sbjct: 82  FFGLNKRSREILMPYFHALSPIPPTLFIPYVIAILPTFQTASMS----LIFIGAFWPVFL 137

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             I G       + + A S  + G  +   ++LP   P+ ++GA T+ G ++    ++E+
Sbjct: 138 GTIHGVLLIEKHYLDNAKSLGLKGPTFLLKVVLPASAPHILSGASTSLGMSFLILTIAEM 197

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                    ++G+G +I   ++   +  V+ G++     ++A+
Sbjct: 198 FG------ASSGMGFFIQYYSDFSQYHYVLAGIIFNSIIIVAI 234



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 83/243 (34%), Gaps = 17/243 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             ++      I     P+ +  I   +  +  L      +   ++     +L+   V   
Sbjct: 22  WALVTKYATWINPIIFPQPLTVIESFSAKIGELVTGVVSSMKLLIPGFFGALVTGIVGGL 81

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
               ++R   +L+P    +  IP   F+ + +              + A++  IF    W
Sbjct: 82  FFGLNKRSREILMPYFHALSPIPPTLFIPYVIAIL--------PTFQTASMSLIFIGAFW 133

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +       +  I +   + ++S  L G      + +P S P ++     S+   +  + 
Sbjct: 134 PVFLGTIHGVLLIEKHYLDNAKSLGLKGPTFLLKVVLPASAPHILSGASTSLGMSFLILT 193

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQLLFRPMIV 265
            +EM           G+G +I           +L  ++    ++  I +  + L + ++ 
Sbjct: 194 IAEMFGASS------GMGFFIQYYSDFSQYHYVLAGIIFNSIIIVAIMIAFEKLKKRLLF 247

Query: 266 WSN 268
           W+N
Sbjct: 248 WTN 250


>gi|254461005|ref|ZP_05074421.1| glycine betaine transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677594|gb|EDZ42081.1| glycine betaine transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 342

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 94/233 (40%), Gaps = 17/233 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFV 85
             ++ ILL      +    +   V  ++ +  L  +   A +T   +     IS++    
Sbjct: 109 FIMVPILLAISWFASRSVGVTVFVAFSIFLLGLVDHYDVAMQTLSIIFVCTGISVMLGVP 168

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                +KS +L   +VP+LD++Q++P   +L   +  F                 AI   
Sbjct: 169 IGIAMSKSDKLQRSVVPVLDLLQTLPTFVYLIPLIFLFSVTESKLYG-------IAIILY 221

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  + +D+ E + +F ++  QK   + +P ++P ++  +  ++     
Sbjct: 222 AIVPVVRLTDLGIRLVDQDVIEAANAFGMNSRQKLMGVELPLALPNIMAGINQTIMMSLA 281

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++         PG+G  +   I+  +L   + A + ++ +  + D++
Sbjct: 282 MVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDRV 327



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 75/232 (32%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+    +    +        +     ++        ++    +   T+  + V   I+ +
Sbjct: 105 VTPWFIMVPILLAISWFASRSVGVTVFVAFSIFLLGLVDHYDVAMQTLSIIFVCTGISVM 164

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +     +   + P   LL   P  V+    +  +  + +  +    + +I  
Sbjct: 165 LGVPIGIAMSKSDKLQRSVVPVLDLLQTLPTFVYL---IPLIFLFSVTESKLYGIAIILY 221

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A++F +   +    + LP   P  + G       +  
Sbjct: 222 AIVPVVRLTDLGIRLVDQDVIEAANAFGMNSRQKLMGVELPLALPNIMAGINQTIMMSLA 281

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++  + +    + L+R
Sbjct: 282 MVVIASLVS-------APGLGVNVLRGIRNLELGVGIVAGIGIVLLAVILDR 326


>gi|254441234|ref|ZP_05054727.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198251312|gb|EDY75627.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 345

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 95/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            LV+ +   L + +        ++    + +      +  + +   +LSA V+ +     
Sbjct: 122 FLVVALFAALAYVLHRKWAIVALIAFGFLFIIDQGYYEETAESLSLVLSACVVCMSIGVP 181

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +  S
Sbjct: 182 IGIGAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLVATVIFVLPAS 238

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + + P+ L E + +F  +  QK   + +P +MP ++  +  ++     
Sbjct: 239 -----IRLTHLGISSTPQSLLEAADAFGATKRQKLVKVELPSAMPQIMTGLNQTIMLSLS 293

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   D      + L ++ V  + D++L
Sbjct: 294 MVVIAALV-------GADGLGVPVVRALNTVDTAKGFESGLIIVVVAIMLDRML 340



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 109/347 (31%), Gaps = 15/347 (4%)

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I  AI       + + ++ M   I      +F   I W+ +  L  T    P  +     
Sbjct: 7   IWDAIIAL-FHGLWWCVVAMWDFIVWLIPAVF-WFITWAPQRILGMTDEKLPVGTTARDG 64

Query: 289 FR--KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
           F   K     F+   S      +   +  + R  G+   +       +      ++   +
Sbjct: 65  FEYIKEGAAPFLDGFSDLIEVFIEVLLALMLRPPGINWINGRRFEPFVSFWTEQTHAFLV 124

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
                     +   W  +  I   F +            ++  V+   ++   I +P+GI
Sbjct: 125 VALFAALAYVLHRKWAIVALIAFGFLFIIDQGYYEETAESLSLVLSACVVCMSIGVPIGI 184

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               RP + + ++P   L+   P  V+    +       +   +   + ++  +      
Sbjct: 185 GAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLVATVIFVLPASIRL--- 241

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G S+ P    E A +F  T  +    + LP   P  +TG       + +  +++ +
Sbjct: 242 -THLGISSTPQSLLEAADAFGATKRQKLVKVELPSAMPQIMTGLNQTIMLSLSMVVIAAL 300

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      GLG  +  +       +     LI+    + L+R L
Sbjct: 301 VG-------ADGLGVPVVRALNTVDTAKGFESGLIIVVVAIMLDRML 340


>gi|45358430|ref|NP_987987.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|44921188|emb|CAF30423.1| ABC-type proline/glycine betaine transport system, permease
           component related protein [Methanococcus maripaludis S2]
          Length = 277

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   ++++ +I+LL       + A+S+ +  +L P+LD+MQ++P L +L   
Sbjct: 85  GLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     IFA+  +            +  +  +L EV R+F  + WQ 
Sbjct: 145 VLFFG---IGEVPGVIATVIFAMPPA-----IKLTALGIEQVSNELIEVGRAFGGTSWQI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L 
Sbjct: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLA 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A + +  +  ++D++
Sbjct: 250 PALEAGIAVTFLAVIFDRI 268



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 83/228 (36%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++  +   I W+++      ++   ++ ++ +G      IT+  ++   +IA ++ IP+
Sbjct: 52  YLMILLIAVIVWKTVNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPL 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +S+ + P   ++   P+  +    V       +   +   +          
Sbjct: 112 GIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIF----AMPPA 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     N+  EV  +F  T W+    I LP   P  + G   A   +++  +++
Sbjct: 168 IKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                G       GLG  I    ++ S    +   + +    +  +R 
Sbjct: 228 GFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268


>gi|187926222|ref|YP_001892567.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241665710|ref|YP_002984069.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187727976|gb|ACD29140.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240867737|gb|ACS65397.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 276

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 19/213 (8%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   ++   I +++ I +G+W+G     +  + PF ++  A P  +
Sbjct: 66  WFTAGDIYTHLAITLAETILSFGIGTLLGISLGLWLGLSRLAAEVLDPFIKVFNAIPRIL 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ V        +     + +++F T     FN   G           A     +   
Sbjct: 126 LAPIFVMWFGLGLTSKVALGATMVLFITF----FNTYQGVREVNPVILANARLLKASRIS 181

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ +P    + ++    + G A   +IV+E          + GLG  IA++      
Sbjct: 182 LLRHVYVPSATSWILSSLRASVGMAVMGAIVAEYLG------SSAGLGHLIAQAEGVFDA 235

Query: 553 PEVVLGVLIMCCFVLALNR---------FLWHP 576
             V  G++++  FV+AL+R          +W P
Sbjct: 236 TGVFSGIVVLSAFVIALDRSVDALEGKLLVWRP 268



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 17/237 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           ++P  IV  +        +  + + T    + +  I  L           SR    VL P
Sbjct: 54  SMPSSIVARIWEWFTAGDIYTHLAITLAETILSFGIGTLLGISLGLWLGLSRLAAEVLDP 113

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +  +IP +      V++F      KV       +F  F        F+ YQ +  + 
Sbjct: 114 FIKVFNAIPRILLAPIFVMWFGLGLTSKVALGATMVLFITF--------FNTYQGVREVN 165

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R  + S      ++ VP +   ++ ++  S+       + +E +         
Sbjct: 166 PVILANARLLKASRISLLRHVYVPSATSWILSSLRASVGMAVMGAIVAEYLGSSA----- 220

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTT 276
            G+G  IA A    D   +   ++ +   +   D+    L   ++VW  K   E + 
Sbjct: 221 -GLGHLIAQAEGVFDATGVFSGIVVLSAFVIALDRSVDALEGKLLVWRPKVDPETSA 276


>gi|91780303|ref|YP_555510.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692963|gb|ABE36160.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 280

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 93/276 (33%), Gaps = 10/276 (3%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           + +     F+  +    ++ R               +     ++ +L  +       ++ 
Sbjct: 1   MTFHQRAVFAGAAGPAARIARWFARWFARCAPLRHLIALPLPLALLLVWWTGYRAAWISP 60

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +       +           +     +++ RV+   ++   + +P+G+ +G    I   
Sbjct: 61  QVLPSIGQVVHALGAGWQSGDLQRDAGVSLLRVLAGFVLGGTLGVPLGVAMGLSERIRDY 120

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  +++A  P   + PL+V  +            +L+       I  N   G    P 
Sbjct: 121 VYPCFRIIAYVPLLGWLPLLVLVLGIGET----LKIVLIAKAALVPITLNTYNGMRNVPA 176

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            + E+ + F  + W+  R+++ P  FP   +G        W   ++ E  +        +
Sbjct: 177 AYGELGAVFRFSRWQLIRHVVFPAAFPQIWSGVRYGLTQCWLLLVIVEFLA------SDS 230

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  I    +      V   +L++      L+R L
Sbjct: 231 GLGYMIISGQQLFQMDTVFAALLVIGVIGFLLDRGL 266



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 78/213 (36%), Gaps = 14/213 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            +V  +        L + A  + LR+L+  V+              S R+   + P   I
Sbjct: 68  QVVHALGAGWQSGDLQRDAGVSLLRVLAGFVLGGTLGVPLGVAMGLSERIRDYVYPCFRI 127

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +            ++ ++ L    +   E   I  I  + +  +T + Y  + N+P    
Sbjct: 128 IAY--------VPLLGWLPLLVLVLGIGETLKIVLIAKAALVPITLNTYNGMRNVPAAYG 179

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E+   FR S WQ   ++  P + P +   +   ++  W  +V  E +          G+G
Sbjct: 180 ELGAVFRFSRWQLIRHVVFPAAFPQIWSGVRYGLTQCWLLLVIVEFLASDS------GLG 233

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             I    +   +  +  A+L +  + FL D+ L
Sbjct: 234 YMIISGQQLFQMDTVFAALLVIGVIGFLLDRGL 266


>gi|226196383|ref|ZP_03791965.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|225931600|gb|EEH27605.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 243

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 83/230 (36%), Gaps = 10/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   +      ++  +  + +  +   +   +   +     ++ +R +V   I   + +
Sbjct: 3   VLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGL 62

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+  G        +    Q++   PA    PLV+                L+  G  +
Sbjct: 63  ALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVALGVFF 118

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  W   I
Sbjct: 119 PVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLI 178

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V+E  S        +G+G     + E      VV+G+L+        +  
Sbjct: 179 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 222



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 14  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 73

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 74  AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 125

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 126 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 184

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L    +  L D L   L R  + W
Sbjct: 185 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRW 233


>gi|222096411|ref|YP_002530468.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter , permease [Bacillus cereus Q1]
 gi|221240469|gb|ACM13179.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus Q1]
          Length = 282

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 18/249 (7%)

Query: 29  IGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
             +  +     +     P DI       +    L  + S +  R  +   I      +  
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGSLGIILG 104

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           T+   S R    L P + +++++P L      V++F      KV+     A F       
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF------- 157

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  + +  +  +   L +V+R    S  +    L +P ++P L+    +S+   W  +
Sbjct: 158 -PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITQLILPAALPNLLLGARLSLGVAWVSL 216

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMI 264
           V +E++          GIG  I  A +  +   +   ++    V    D   +LL    +
Sbjct: 217 VVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLARLLEVKFL 270

Query: 265 VWSNKFRLE 273
            W + F+ E
Sbjct: 271 RWRDNFKGE 279



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 12/221 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITQLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +         T G+G  I ++ +  +   V +G++I     
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVG 255


>gi|254471651|ref|ZP_05085052.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
 gi|211958853|gb|EEA94052.1| binding-protein-dependent transport systems inner membrane
           component [Pseudovibrio sp. JE062]
          Length = 266

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+V    I + + I VG+ IG      + + P        P     PL +       
Sbjct: 77  SLYRLVFGWSIGTALGILVGLLIGLFSLARASLLPLTSAFFPIPKIALLPLFIIWFGIGE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +        ++FGT +  +     G          +  SF ++     R IILPG  P 
Sbjct: 137 GSKVAT----ILFGTFFPTVIATYGGVDNVERGLIRMGQSFGMSWLSIVRKIILPGALPA 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++GA  +   A    + +E+           G+GAY+  +    +  ++++GV ++   
Sbjct: 193 ILSGARISASIAIILLVAAEMIG------AEYGIGAYVLMAGSLFATDQLIVGVAMLSVL 246

Query: 566 VLALNRFL 573
            L ++  +
Sbjct: 247 GLCVSWLI 254



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 21/260 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSL 61
           PF      P     +A  + + ++     G +           P +             L
Sbjct: 11  PFRGGGFKPRPIRFVAPFVFLALVLFWEFGSRTGLISNLVLPAPSEAFQAFMDLYHSGLL 70

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++ S +  R++    I      +   L          L+P+      IP +  L   ++
Sbjct: 71  WKHVSTSLYRLVFGWSIGTALGILVGLLIGLFSLARASLLPLTSAFFPIPKIALLPLFII 130

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      K        +  I     +    + Y  + N+ R L  + +SF +S      
Sbjct: 131 WFGIGEGSK--------VATILFGTFFPTVIATYGGVDNVERGLIRMGQSFGMSWLSIVR 182

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++    +S S     +VA+EMI          GIG+Y+ +A        +
Sbjct: 183 KIILPGALPAILSGARISASIAIILLVAAEMIG------AEYGIGAYVLMAGSLFATDQL 236

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           +  +  +  +      L+ +
Sbjct: 237 IVGVAMLSVLGLCVSWLIGK 256


>gi|271963349|ref|YP_003337545.1| ABC transporter transmembrane protein [Streptosporangium roseum DSM
           43021]
 gi|270506524|gb|ACZ84802.1| ABC transporter membrane protein [Streptosporangium roseum DSM
           43021]
          Length = 256

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+      ++IA  + +P G+ +G  P + S ++P  + L   P+    PL +   +   
Sbjct: 60  TLLACGCGLLIAVAVAVPAGLLLGTVPTVESALRPLIEFLRPIPSVALIPLALFLFTDG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L++F   W +L N + G        K+   SF          + LP   P+
Sbjct: 119 ---TQAKVALIVFTAAWPLLINTMYGLREVDPVAKDTLRSFGFGPLAVVVRVSLPSAAPF 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG   A   A   ++  E+ + G       G+G ++ ++        ++  VL     
Sbjct: 176 VVTGVRIAASVALIVAVSVELVAGG------AGIGTFLGDAAAGNQRDTMLAAVLWTGVI 229

Query: 566 VLALNRFL 573
            L  N  L
Sbjct: 230 GLTANTLL 237



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 89/248 (35%), Gaps = 16/248 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR    +   LA +  +G   ++   +        +  +  + +D   L   A  T L 
Sbjct: 6   TRRGVAGVAVCLAVLETLGRTGLIDP-LLLPLASTVVAGVARLAIDPDFLAD-AGHTLLA 63

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               ++I++        L      +   L P+++ ++ IP +  +   +  F +      
Sbjct: 64  CGCGLLIAVAVAVPAGLLLGTVPTVESALRPLIEFLRPIPSVALIPLALFLFTDG----- 118

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                A +  I  +  W +  +    L  +    ++  RSF          + +P + P 
Sbjct: 119 ---TQAKVALIVFTAAWPLLINTMYGLREVDPVAKDTLRSFGFGPLAVVVRVSLPSAAPF 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  + ++ S      V+ E++  G       GIG+++  A        +L A+L    +
Sbjct: 176 VVTGVRIAASVALIVAVSVELVAGGA------GIGTFLGDAAAGNQRDTMLAAVLWTGVI 229

Query: 252 IFLYDQLL 259
               + LL
Sbjct: 230 GLTANTLL 237


>gi|319781844|ref|YP_004141320.1| choline ABC transporter permease protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317167732|gb|ADV11270.1| choline ABC transporter, permease protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 284

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 106/234 (45%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +++ +I  ++  + + + P  I   +  I +   +L +   +T + +++A  +++    
Sbjct: 57  PVLLALIIAVIAWLLQRSRPLAIGVFLGLIFIINQNLWKQTVQTLVLVVAAAAMAMAIGV 116

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA   ++  V++P+LD+MQ++P   +L   +  F     G   G  +  IF I T
Sbjct: 117 PLGIWAAHKPKVYRVMLPVLDLMQTLPTFVYLIPVLTLFGL---GNAPGLIVTIIFVIPT 173

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +         +  + ++P+ + E   +F  +  Q  W + +P ++P ++  +  S+    
Sbjct: 174 A-----VRLTHLGVVSVPKSIVEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSL 228

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + +I  G       G+G+ I  A+  + +   L A L ++ +  + D++
Sbjct: 229 SMVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRT----LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           IG     FF  L++N   + R     L  +        L +        +  I W     
Sbjct: 15  IGAWGKAFFGFLTDNFDTVFRAFSNGLNFLLDGLVGILLMVPPVLLALIIAVIAWLLQRS 74

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                  +  + +I+N   ++  +        T+  VV    +A  I +P+GIW   +P 
Sbjct: 75  RPLAIGVFLGLIFIINQNLWKQTVQ-------TLVLVVAAAAMAMAIGVPLGIWAAHKPK 127

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   L+   P  V+   V++     +    +   + +I             G  
Sbjct: 128 VYRVMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIVTIIFVIPTAVRL----THLGVV 183

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    E   +F  T  +    + LP   P  + G   +   + +  + + +   G   
Sbjct: 184 SVPKSIVEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLSMVVFAALIGAG--- 240

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  I  +         +   L +    + L+R 
Sbjct: 241 ----GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275


>gi|296269302|ref|YP_003651934.1| binding-protein-dependent transporter inner membrane component
           [Thermobispora bispora DSM 43833]
 gi|296092089|gb|ADG88041.1| binding-protein-dependent transport systems inner membrane
           component [Thermobispora bispora DSM 43833]
          Length = 260

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 90/214 (42%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L ++   +  R+L   +  +        L      +  +L P +  ++++P L +L+ 
Sbjct: 60  HTLGEHLLASLRRILLGCLYGIGGGIALGLLIGMVPTVRALLGPPVTFVRTLPPLAYLSL 119

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F           E   ++ +  + +  +  S   ++  +  D    +RS  +  WQ
Sbjct: 120 LVIWFGID--------EEPKVWLLLIAALPPVAVSTADAVRGVHEDYLNAARSLGVPRWQ 171

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + +++   +  VVA+E +        +PGIG  I  A +    
Sbjct: 172 LPWRVVLPSALPEILTGIRVAVGVAYTSVVAAETV------NGIPGIGGMIRDAQRYNQT 225

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             ++  +L +     L D LL    R ++ W  +
Sbjct: 226 DVVILGILIIGLSGLLIDFLLQTLDRRLVPWRGR 259



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++  +      I +G+ IG  P + + + P    +   P   +  L+V     
Sbjct: 67  LASLRRILLGCLYGIGGGIALGLLIGMVPTVRALLGPPVTFVRTLPPLAYLSLLVIWFGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++      +  +          D+   A S  +  W+    ++LP   
Sbjct: 127 ----DEEPKVWLLLIAALPPVAVSTADAVRGVHEDYLNAARSLGVPRWQLPWRVVLPSAL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A+ + + +E  +         G+G  I ++        V+LG+LI+ 
Sbjct: 183 PEILTGIRVAVGVAYTSVVAAETVNG------IPGIGGMIRDAQRYNQTDVVILGILIIG 236

Query: 564 CFVLALNRFLW---HPLYLYGTR 583
              L ++  L      L  +  R
Sbjct: 237 LSGLLIDFLLQTLDRRLVPWRGR 259


>gi|241662880|ref|YP_002981240.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|240864907|gb|ACS62568.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 272

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 17/263 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            +R+ P I   +  VL        L   +    P D+            L  + + +T R
Sbjct: 21  RQRLAPWIVPFVLLVLWQASAQWGLLSNRILPAPLDVAKSAVALARSGELWTHVAVSTWR 80

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    I      V   L    R    +L   L ++++IP+L  +   +++F        
Sbjct: 81  ALLGFAIGGSLGLVLGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGID----- 135

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + +P ++P 
Sbjct: 136 ---ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGALPQ 192

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E +          GIG     A +      +L  +L    +
Sbjct: 193 ILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLGILLYALL 246

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             L D L   L R  + W   ++
Sbjct: 247 GKLADWLSRGLERYWLRWHPGYQ 269



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 16/233 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS------IGYIVNHFTYQDVLYVIWL 382
           +  L+    +   +++      +    A      +      +    +         +   
Sbjct: 14  KALLRTARQRLAPWIVPFVLLVLWQASAQWGLLSNRILPAPLDVAKSAVALARSGELWTH 73

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             ++ +R ++   I   + + +G+  G      + +    Q++   P     PLV+    
Sbjct: 74  VAVSTWRALLGFAIGGSLGLVLGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       L+  G  + I  N   G  +      E+A S+ ++  + +R +ILPG 
Sbjct: 134 I----DESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGA 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            P  + G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 190 LPQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 236


>gi|229185127|ref|ZP_04312315.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BGSC 6E1]
 gi|228598384|gb|EEK56016.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BGSC 6E1]
          Length = 282

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   V          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       L    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 SFKGET 280


>gi|73538712|ref|YP_299079.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72122049|gb|AAZ64235.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 296

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 106/289 (36%), Gaps = 23/289 (7%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             +PL                  P+ + QL +      +  +    ++  +       + 
Sbjct: 11  LAAPLPMTSAAPTNPREPQWIDVPKPWWQLRTALPARRVALLVGAGLILPLLGWALLAAS 70

Query: 365 GYIVNHFTYQDVLYVIWL------------GCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
           G++   F       V  L              I+  RV+    +++++ +P+G+ IG   
Sbjct: 71  GWVDPVFMPGPAAIVARLREWAFDDDLAGDIAISTARVLAGWALSALLALPLGLLIGSFR 130

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P    +   PA  F PLV+  V             ++  GT + ++  V    
Sbjct: 131 TVQALLEPLTDFIRYMPAVAFIPLVMVWVGI----DEGAKVAIIFIGTFFQMVLMVAEDV 186

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P    E A +   T     +++I+P   P  +       G AW   +V+E+ + G  
Sbjct: 187 RRVPMAQVEAAQTMGATRGEIIQHVIVPSAKPALLDTLRVTMGWAWTYLVVAELVAAG-- 244

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
               +GLG  I ++       ++  G+L++    LA+++F+   L+   
Sbjct: 245 ----SGLGFAILKAQRFLQTDKIFAGILLIGVIGLAIDQFM-RRLHRLA 288



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 20/246 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS------LPQYASRTTLRMLSA 75
           L+   L++ ++   L        P  +     I   +        L    + +T R+L+ 
Sbjct: 52  LVGAGLILPLLGWALLAASGWVDPVFMPGPAAIVARLREWAFDDDLAGDIAISTARVLAG 111

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             +S L       L    R +  +L P+ D ++ +P + F+   +V+            E
Sbjct: 112 WALSALLALPLGLLIGSFRTVQALLEPLTDFIRYMPAVAFIPLVMVWVGID--------E 163

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A +  IF    + M   + + +  +P    E +++   +  +   ++ VP + P L+  
Sbjct: 164 GAKVAIIFIGTFFQMVLMVAEDVRRVPMAQVEAAQTMGATRGEIIQHVIVPSAKPALLDT 223

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++M   W ++V +E++  G       G+G  I  A +      I   +L +  +    
Sbjct: 224 LRVTMGWAWTYLVVAELVAAGS------GLGFAILKAQRFLQTDKIFAGILLIGVIGLAI 277

Query: 256 DQLLFR 261
           DQ + R
Sbjct: 278 DQFMRR 283


>gi|270283894|ref|ZP_05965165.2| sulfonate ABC transporter, permease protein SsuC [Bifidobacterium
           gallicum DSM 20093]
 gi|270277647|gb|EFA23501.1| sulfonate ABC transporter, permease protein SsuC [Bifidobacterium
           gallicum DSM 20093]
          Length = 223

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ RV++ +++   + +P  +  G        + P   +L A P     P+
Sbjct: 26  GILLPAMGASVLRVLMGLLLGIAVAVPFAVATGMSRWGRRVLDPPIHMLRAIPFPALAPI 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +            +L+  G    I  NV    +       EVA ++ +        
Sbjct: 86  LIMLIGI----DEGMKVVLIAIGAFALIYVNVRDAIAGIDPKLIEVAHTYGLPRRTVIGR 141

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+PG  P ++TG   A   AW A +  E  +         GLG  ++ + +     E+ 
Sbjct: 142 IIIPGTLPGFMTGLRFATTVAWIALVTCETINCQQ------GLGYVLSRAQQFSRMDEMA 195

Query: 557 LGVLIMCCFVLALNRFL 573
           + +LI     LA    +
Sbjct: 196 VCILIYALLGLACEAIV 212



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 83/236 (35%), Gaps = 17/236 (7%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           + L        P  +       +    L      + LR+L  +++ +     +A     S
Sbjct: 1   MTLSAADTDAFPLQMAHAFTRLVSSGILLPAMGASVLRVLMGLLLGIAVAVPFAVATGMS 60

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    VL P + ++++IP        ++        KV+   + A   I+         +
Sbjct: 61  RWGRRVLDPPIHMLRAIPFPALAPILIMLIGIDEGMKVVLIAIGAFALIYV--------N 112

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +  ++  I   L EV+ ++ L        + +P ++PG +  +  + +  W  +V  E I
Sbjct: 113 VRDAIAGIDPKLIEVAHTYGLPRRTVIGRIIIPGTLPGFMTGLRFATTVAWIALVTCETI 172

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
                     G+G  ++ A +   +  +   +L    +            R ++VW
Sbjct: 173 ------NCQQGLGYVLSRAQQFSRMDEMAVCILIYALLGLACEAIVTFAERVVLVW 222


>gi|301054429|ref|YP_003792640.1| sulfonate ABC transporter permease [Bacillus anthracis CI]
 gi|300376598|gb|ADK05502.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus biovar anthracis
           str. CI]
          Length = 282

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   V          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       L    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELLKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 SFKGET 280


>gi|150017718|ref|YP_001309972.1| glycine/betaine ABC transporter substrate-binding protein
           [Clostridium beijerinckii NCIMB 8052]
 gi|149904183|gb|ABR35016.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium beijerinckii NCIMB 8052]
          Length = 524

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 19/199 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T L +     I+++       L +  ++L   ++ I  ++Q+IP +  L F +
Sbjct: 19  LLEHIKLTALSV----GIAIIIGMPLGILTSYVKKLNKPILGIASVVQAIPSMALLGFAI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +     P         AI  +    +  +  +    + NI  D+ E S+   L+ +Q  
Sbjct: 75  PFLGIGTPP--------AIVMVVLYSLLPIIKNTTTGIDNINPDMLEASKGIGLTKFQVL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+  +   
Sbjct: 127 VKVQIPLALPVIMSGIRIS------AVTAVGLMTMAAF-IGGGGLGYLVFSGIRTVNNYQ 179

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL   +    +  L D L 
Sbjct: 180 ILAGAIPACILALLVDGLF 198



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I L    +    + + IA II +P+GI   +   ++  I   A ++ A P+       
Sbjct: 14  QIITLLLEHIKLTALSVGIAIIIGMPLGILTSYVKKLNKPILGIASVVQAIPSMALLGFA 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            ++++  +   I+ N   G      D  E +    +T ++    +
Sbjct: 74  IPFLGIG----TPPAIVMVVLYSLLPIIKNTTTGIDNINPDMLEASKGIGLTKFQVLVKV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  ++G   +   A     ++     G       GLG  +       +  +++ 
Sbjct: 130 QIPLALPVIMSGIRISAVTAVGLMTMAAFIGGG-------GLGYLVFSGIRTVNNYQILA 182

Query: 558 GVLIMCCFVLALNRFL 573
           G +  C   L ++   
Sbjct: 183 GAIPACILALLVDGLF 198


>gi|161524842|ref|YP_001579854.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189350408|ref|YP_001946036.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160342271|gb|ABX15357.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189334430|dbj|BAG43500.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 273

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R ++   +   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 75  VSTWRALLGFAVGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +      E+A S+ + G+  +R++ILPG  P
Sbjct: 134 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDASLIEMAKSYGVRGFALYRHVILPGALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 191 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 244

Query: 565 FVLALNRF 572
                +  
Sbjct: 245 LGKLADVL 252



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    +      +T R L    +              S+   + L 
Sbjct: 50  LPEPVAVVRAAWSLVTSGEMWANVKVSTWRALLGFAVGGGVGLALGLATGLSKAAEVALD 109

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 110 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTYHGIRSV 161

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+++S+ + G+  + ++ +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 162 DASLIEMAKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 215

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 216 QSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQ 268


>gi|154499091|ref|ZP_02037469.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC
           29799]
 gi|150271931|gb|EDM99157.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC
           29799]
          Length = 304

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 10/204 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    ++     ++  + +   IA  +   +G+  G+ P +   + P A++L+  P
Sbjct: 100 QVFADQWPLMLRGIGSSLSLLAIGFGIALPLGALLGMLAGWSPRLRGFLVPIARVLSPVP 159

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A ++ P +++ +  +        +L++I G  W      +           + A    ++
Sbjct: 160 AIIYAPYLIALMPSFRS----ASALVIILGIFWPTFLQTVGRTVGLDPHILDSARVLCLS 215

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  I LP + P  ++G   +   ++    ++E+         T+GLG +I    + 
Sbjct: 216 DREMVFQIFLPALLPGLISGLRVSLSTSFMLLTLAEMMG------ATSGLGYFIKNFADY 269

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            ++  V+ G+L++   V ALN  +
Sbjct: 270 ANYTNVIAGILLVALVVTALNGLV 293



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 85/249 (34%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L     V  +   +L       VP               + +    +   +     I+L 
Sbjct: 70  LFLLFNVWELWATVLGKAHPILVPTPEAVFQVFADQWPLMLRGIGSSLSLLAIGFGIALP 129

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  S RL   LVPI  ++  +P + +  + +          +     A+   
Sbjct: 130 LGALLGMLAGWSPRLRGFLVPIARVLSPVPAIIYAPYLIAL--------MPSFRSASALV 181

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     W            +   + + +R   LS  +  + + +P  +PGL+  + +S+S
Sbjct: 182 IILGIFWPTFLQTVGRTVGLDPHILDSARVLCLSDREMVFQIFLPALLPGLISGLRVSLS 241

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +  +  +EM+          G+G +I       +   ++  +L +  V+   + L   
Sbjct: 242 TSFMLLTLAEMMG------ATSGLGYFIKNFADYANYTNVIAGILLVALVVTALNGLVTV 295

Query: 259 LFRPMIVWS 267
           L R  I WS
Sbjct: 296 LERKAIRWS 304


>gi|134097166|ref|YP_001102827.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005377|ref|ZP_06563350.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909789|emb|CAL99901.1| ABC transporter, permease component [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 247

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 94/237 (39%), Gaps = 22/237 (9%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI---------- 399
            ++   A+  A+  +G +   +     L ++ L  +   R+ +L +IAS+          
Sbjct: 2   GLLGFFAVWEAFSRLGPVPQQYLPPPSLVLVRLAELLGDRMFLLDVIASVLAWAIALGIS 61

Query: 400 --IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I +P G+ +G  P +    +   + L   P+    PL +  +             L +
Sbjct: 62  VVIAVPAGLLLGSVPAVRVATRAIIEFLRPIPSVALIPLALVLIGSGPNTK----ISLAV 117

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           + + W ILFN I           E A SF +   R    + LP   P+ +TG   +   A
Sbjct: 118 YASVWPILFNTIYALDEMDPVMVETARSFGLGRARVLFSVALPNSAPFVLTGVRMSAAVA 177

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAES-TEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + +E  + G     T+GLG+++ ++ T  G    V+ G L+      A+N  L
Sbjct: 178 LILVVSTEFLAGG-----TSGLGSFVLDASTGAGRMDLVLAGTLVAGVIGFAINEAL 229



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 14/233 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79
            LL F  V    + L    Q+   P  +V +    L            + L    A+ IS
Sbjct: 2   GLLGFFAVWEAFSRLGPVPQQYLPPPSLVLVRLAELLGDRMFLLDVIASVLAWAIALGIS 61

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++       L      + +    I++ ++ IP +  +   +V   +             I
Sbjct: 62  VVIAVPAGLLLGSVPAVRVATRAIIEFLRPIPSVALIPLALVLIGSG--------PNTKI 113

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
                + VW + F+   +L  +   + E +RSF L   +  + + +P S P ++  + MS
Sbjct: 114 SLAVYASVWPILFNTIYALDEMDPVMVETARSFGLGRARVLFSVALPNSAPFVLTGVRMS 173

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            +     VV++E +  G +     G+GS++  A      + ++ A   + GVI
Sbjct: 174 AAVALILVVSTEFLAGGTS-----GLGSFVLDASTGAGRMDLVLAGTLVAGVI 221


>gi|254245525|ref|ZP_04938846.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia cenocepacia PC184]
 gi|124870301|gb|EAY62017.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic
           ligand binding protein [Burkholderia cenocepacia PC184]
          Length = 270

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 84/248 (33%), Gaps = 17/248 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------- 384
           +   + + V+  L      VV  V     W S   +          + +           
Sbjct: 12  VAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVK 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 72  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+   R +ILPG  P
Sbjct: 131 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALCRDVILPGALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 188 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 241

Query: 565 FVLALNRF 572
                +  
Sbjct: 242 LGKLADVL 249



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 94/262 (35%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        LA ++V  +         +    P  +V      +    +      +T R 
Sbjct: 18  RGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I              S+   + L   + ++++IP L  +   +++F         
Sbjct: 78  LFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++  +L E+++S+ + G+     + +P ++P +
Sbjct: 132 --EKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALCRDVILPGALPSI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      ++  +L    + 
Sbjct: 190 LVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   + R  + W   ++
Sbjct: 244 KLADVLAKWIERVTLRWHPAYQ 265


>gi|319782336|ref|YP_004141812.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168224|gb|ADV11762.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 288

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 86/254 (33%), Gaps = 12/254 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYV 379
              F      L +     V   +   WF +    A+      +    +    +      +
Sbjct: 33  ATPFRAVPRSLSITLGFMVWIAVIGGWFALTYSGAVKEMFLPRPESVLSTTISMALDGSL 92

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++  V++  +++SI+ +P+G+ +G    + + ++P    +   P   F PL + 
Sbjct: 93  WEHVFASVQVVLIGFVLSSIVAVPLGLTMGTYRIVQAVLEPLVNFIRYLPVTSFVPLFIL 152

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +             +++FG  +  L  +   A +   D    A +          +I+ 
Sbjct: 153 WIGIGIEQ----RVAVIVFGVFFQQLVMIADSARSVQRDLVNAAYTLGTKRGDTVFHIVF 208

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  +       G AW   +V+E+ +        +GLG    ++        + + +
Sbjct: 209 PATLPSVLDVLRVTMGWAWTYLVVAELVA------ARSGLGYISLKAMRGFQVDVIFMAI 262

Query: 560 LIMCCFVLALNRFL 573
            ++    L  ++  
Sbjct: 263 AMIGILGLCTDQLF 276



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 95/253 (37%), Gaps = 20/253 (7%)

Query: 22  LLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++   ++ G   +   G  +      P  ++          SL ++   +   +L   V+
Sbjct: 50  MVWIAVIGGWFALTYSGAVKEMFLPRPESVLSTTISMALDGSLWEHVFASVQVVLIGFVL 109

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S +            R +  VL P+++ ++ +P+  F+   +++       +        
Sbjct: 110 SSIVAVPLGLTMGTYRIVQAVLEPLVNFIRYLPVTSFVPLFILWIGIGIEQR-------- 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I     +     +  S  ++ RDL   + +         +++  P ++P ++  + +
Sbjct: 162 VAVIVFGVFFQQLVMIADSARSVQRDLVNAAYTLGTKRGDTVFHIVFPATLPSVLDVLRV 221

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +M   W ++V +E++          G+G     A++   +  I  A+  +  +    DQL
Sbjct: 222 TMGWAWTYLVVAELVA------ARSGLGYISLKAMRGFQVDVIFMAIAMIGILGLCTDQL 275

Query: 259 ---LFRPMIVWSN 268
              + R +  W+N
Sbjct: 276 FRGIRRLVAPWAN 288


>gi|309776271|ref|ZP_07671260.1| osmoprotectant ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915951|gb|EFP61702.1| osmoprotectant ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 523

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 77/188 (40%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L ++++++        L +  ++L   ++ I +I+Q+IP L  L F + +         
Sbjct: 26  TLFSVILAIAIGVPLGILISYMKKLTKPVLGIANIVQAIPSLALLGFAIPFLGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AIF +    +  +  + Y  + +IP    E ++   ++  Q    + +P ++P 
Sbjct: 81  ---SKPAIFMVILYSLLPIIKNTYTGIQSIPEQTLEAAKGIGMTKAQILLKVQIPMALPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    I   G+G  +   I+  + + IL   +    +
Sbjct: 138 IMAGVRIS------AVTAVGLMTIAAF-IGAGGLGYLVYSGIRTSNTMQILAGAIPACIL 190

Query: 252 IFLYDQLL 259
             + D  +
Sbjct: 191 ALVIDAFM 198



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +I+A  I +P+GI I +   ++  +   A ++ A P+       +  +       + 
Sbjct: 27  LFSVILAIAIGVPLGILISYMKKLTKPVLGIANIVQAIPSLALLGFAIPFLGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++I  +   I+ N   G  + P    E A    +T  +    + +P   P  + G 
Sbjct: 83  PAIFMVILYSLLPIIKNTYTGIQSIPEQTLEAAKGIGMTKAQILLKVQIPMALPIIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +       +  +++ G +  C   L ++
Sbjct: 143 RISAVTAVGLMTIAAFIGAG-------GLGYLVYSGIRTSNTMQILAGAIPACILALVID 195

Query: 571 RFL 573
            F+
Sbjct: 196 AFM 198


>gi|297521440|ref|ZP_06939826.1| alkanesulfonate transporter permease subunit [Escherichia coli
           OP50]
          Length = 246

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 106/258 (41%), Gaps = 18/258 (6%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  V V  + + +     +    P  +V           L Q+ + ++ R L    I   
Sbjct: 2   VGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGS 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   ++  SR    +L   + +++++P L  +   +++F           E A IF 
Sbjct: 62  LGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ESAKIFL 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +  ++ 
Sbjct: 114 VALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALG 173

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A++    +  L D   QL
Sbjct: 174 LMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQL 227

Query: 259 LFRPMIVWSNKFRLERTT 276
           L R  + W+  + L+  T
Sbjct: 228 LERLWLRWNPAYHLKEAT 245



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 79/227 (34%), Gaps = 19/227 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G +   +T      +     I+ +R ++   I   + + +G+  G        +    Q+
Sbjct: 27  GVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQM 86

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+                L+  GT + I  N   G         E+A 
Sbjct: 87  LRNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMAR 142

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S+ ++G   + ++ILPG  P  + G   A G  W   IV+E  S        +G+G    
Sbjct: 143 SYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAM 196

Query: 545 ESTEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGT 582
            + E      VV+ +++              L R    W+P Y    
Sbjct: 197 NAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKE 243


>gi|304404131|ref|ZP_07385793.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304347109|gb|EFM12941.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 265

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 74/223 (33%), Gaps = 10/223 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           WF     ++  I    +  +           +      +  R ++  +I   I   + I 
Sbjct: 32  WFVSAGLISQRILPTPVAVVEAGIKLVRNGDLFVYIGDSSRRALLGFVIGGGIGFALAII 91

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
            G  P          Q++   P     PL+++               L+  G  + I  N
Sbjct: 92  NGLLPLFEKLTDSSIQMIRTIPHLSLIPLIIAWFGIGEQGK----IFLVALGVAFPIYLN 147

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  A      E+  ++ + G+  +R II PG  P  + G   A G  W   IVSE  
Sbjct: 148 TLHGIRAVDPGLIEMGRTYGLRGFSLFRTIIFPGALPSILVGLRFALGIMWITLIVSETI 207

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           S        +G+G     + E      VVL ++I        +
Sbjct: 208 S------ANSGIGYMAMNAREFFQMDIVVLSIVIYALLGKLSD 244



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 90/244 (36%), Gaps = 17/244 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
            ++  L   +    P  +V+     +    L  Y   ++ R L   VI     F  A + 
Sbjct: 33  FVSAGLISQRILPTPVAVVEAGIKLVRNGDLFVYIGDSSRRALLGFVIGGGIGFALAIIN 92

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
                   +    + ++++IP L  +   + +F     GK        IF +     + +
Sbjct: 93  GLLPLFEKLTDSSIQMIRTIPHLSLIPLIIAWFGIGEQGK--------IFLVALGVAFPI 144

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    +  +   L E+ R++ L G+  F  +  P ++P ++  +  ++   W  ++ S
Sbjct: 145 YLNTLHGIRAVDPGLIEMGRTYGLRGFSLFRTIIFPGALPSILVGLRFALGIMWITLIVS 204

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           E I          GIG     A +   +  ++ +++    +  L D +   + R  + W 
Sbjct: 205 ETISANS------GIGYMAMNAREFFQMDIVVLSIVIYALLGKLSDWIAKVMERSWLQWH 258

Query: 268 NKFR 271
             +R
Sbjct: 259 PHYR 262


>gi|307729503|ref|YP_003906727.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307584038|gb|ADN57436.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 288

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 19/268 (7%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F  +  +     R +G     +    L L + +  +    +     V    + +   + 
Sbjct: 19  AFGWVRASAFGSLRRIGTSLAPWVAPLLILLAWEAAARSGVL--STRVLPEPLAVVKAAW 76

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             I +   + DV        ++ +R V    I   + + +G+  G        +    Q+
Sbjct: 77  SLIQSGEMWADVK-------VSTWRAVSGFAIGGGMGLVLGLATGLFKPAEIALDSTVQM 129

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   PA    PLV+                L+  G  + +  N   G  +   +  E+A 
Sbjct: 130 IRNIPALAMIPLVILWFGIE----EQAKVFLVALGVFFPLYVNTFHGIRSVDPNLIEMAR 185

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S+ + G   +R++ILPG  P  + G   A G  W   IV+E  S        +G+G    
Sbjct: 186 SYGVKGLALYRHVILPGALPSILVGVRFALGLMWVTLIVAETIS------AQSGIGYMTM 239

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + E      VV+G+L+        +  
Sbjct: 240 NAREFLQTDVVVVGILLYAALGKIADVL 267



 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 97/265 (36%), Gaps = 17/265 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            I   + P +  LL  +         +   +    P  +V      +    +      +T
Sbjct: 33  RIGTSLAPWVAPLLILLAWEAAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADVKVST 92

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R +S   I      V        +   + L   + ++++IP L  +   +++F      
Sbjct: 93  WRAVSGFAIGGGMGLVLGLATGLFKPAEIALDSTVQMIRNIPALAMIPLVILWFGIE--- 149

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A +F +     + +  + +  + ++  +L E++RS+ + G   + ++ +P ++
Sbjct: 150 -----EQAKVFLVALGVFFPLYVNTFHGIRSVDPNLIEMARSYGVKGLALYRHVILPGAL 204

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  ++   W  ++ +E I          GIG     A +      ++  +L   
Sbjct: 205 PSILVGVRFALGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYA 258

Query: 250 GVIFLYDQL---LFRPMIVWSNKFR 271
            +  + D L   L R  + W   ++
Sbjct: 259 ALGKIADVLAKSLERVSLRWHPAYQ 283


>gi|83720465|ref|YP_443020.1| aliphatic sulfonate ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167620180|ref|ZP_02388811.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257139249|ref|ZP_05587511.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83654290|gb|ABC38353.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 268

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R  V   I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 70  VSAWRAFVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P
Sbjct: 129 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDAGLVEMARSYGVKGFALYRDVILPGALP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 186 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAA 239

Query: 565 FVLALNRF 572
                +  
Sbjct: 240 LGKLADVL 247



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 84/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       ++   +      +  R      I              S+   + L 
Sbjct: 45  LPEPFAVARAAWALVESGDMWANVKVSAWRAFVGFAIGGGVGLALGLATGLSKAAEVALD 104

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 105 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTYHGIRSV 156

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 157 DAGLVEMARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 210

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 211 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERATLRWHPAYQ 263


>gi|260432661|ref|ZP_05786632.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416489|gb|EEX09748.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter lacuscaerulensis ITI-1157]
          Length = 529

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 87/237 (36%), Gaps = 22/237 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLF 82
            +V+ +I +         V          +L   +L  Y   A  T   + +A+++ + F
Sbjct: 301 PVVMLVICVTAWRAAGPRVAI----FTAASLAYIALLGYWDVAMETVALVGAAVLLCVTF 356

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                    KS+R      P+LD+MQ++P   +L   + +F    P          I A 
Sbjct: 357 GIPLGIWFGKSKRAYRAAEPVLDLMQTLPAFVYLIPIIAFFGTGNPPG--------ILAT 408

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +       +  +P  ++E + +F  S WQ    + +P ++P ++  +  ++  
Sbjct: 409 IIFGMPPVIRLTALGMRGVPESIKEAAVAFGASKWQLLKDVEIPLALPSIMTGVNQTILM 468

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               VV   +I  G     +         A++       L     +L +  + D+++
Sbjct: 469 CLSMVVIISLIGGGGLGKEI-------LEALQYAAKGPGLLGGFAILFLAMVMDRIV 518



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 11/233 (4%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF--WFCVVCG 354
            +G  +   FS L+N ++              +  +    +      + +    + VV  
Sbjct: 246 ILGEGNGTLFSALANWMEARIDAAAAAGGDVFDGIVAGVRSVLDGLTVALIGSPWPVVML 305

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIG 409
           V    AW++ G  V  FT   + Y+  LG       T+  V   +++     IP+GIW G
Sbjct: 306 VICVTAWRAAGPRVAIFTAASLAYIALLGYWDVAMETVALVGAAVLLCVTFGIPLGIWFG 365

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                    +P   L+   PA V+    +  ++++       +   +IFG    ++    
Sbjct: 366 KSKRAYRAAEPVLDLMQTLPAFVYL---IPIIAFFGTGNPPGILATIIFG-MPPVIRLTA 421

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            G    P   KE A +F  + W+  + + +P   P  +TG         +  +
Sbjct: 422 LGMRGVPESIKEAAVAFGASKWQLLKDVEIPLALPSIMTGVNQTILMCLSMVV 474


>gi|221197847|ref|ZP_03570893.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221204595|ref|ZP_03577612.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221213026|ref|ZP_03586002.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221167239|gb|EED99709.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221175452|gb|EEE07882.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221181779|gb|EEE14180.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 269

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R ++   +   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 71  VSTWRALLGFAVGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +      E+A S+ + G+  +R++ILPG  P
Sbjct: 130 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDASLIEMAKSYGVRGFALYRHVILPGALP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 187 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 240

Query: 565 FVLALNRF 572
                +  
Sbjct: 241 LGKLADVL 248



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    +      +T R L    +              S+   + L 
Sbjct: 46  LPEPVAVVRAAWSLVTSGEMWANVKVSTWRALLGFAVGGGVGLALGLATGLSKAAEVALD 105

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 106 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTYHGIRSV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+++S+ + G+  + ++ +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 158 DASLIEMAKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 211

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 212 QSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQ 264


>gi|28900965|ref|NP_800620.1| putative permease [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836719|ref|ZP_01989386.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|260366177|ref|ZP_05778637.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           K5030]
 gi|260879819|ref|ZP_05892174.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AN-5034]
 gi|260894493|ref|ZP_05902989.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28809411|dbj|BAC62453.1| putative permease of ABC transporter [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149750068|gb|EDM60813.1| ABC-type proline/glycine betaine transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|308086416|gb|EFO36111.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308092739|gb|EFO42434.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308114846|gb|EFO52386.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus
           K5030]
          Length = 280

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 90  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 150 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGIIKVPEELLEAGKAFGASRMKLLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 255 FEAGLAIVLVAIILDRL 271



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              +++           S     +  TL  I     + F  +     +     + WF   
Sbjct: 10  PLGQWMETGVDWLTINASVFFDAISITLETIIMFVVDIFKWMPPAAPIIITAALAWFLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     ++  I+N   +Q++L    L       V     I+ +I +P+GI    RP
Sbjct: 70  SLPLVIFIVVALLAILNLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +  +  + L     L   +IF     I      G 
Sbjct: 123 WLYTLLRPILDLMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGI 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P +  E   +F  +  +    + LP   P  + G       + +  +++ +      
Sbjct: 179 IKVPEELLEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     L +    + L+R 
Sbjct: 235 ---ADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRL 271


>gi|171910074|ref|ZP_02925544.1| putative integral membrane components of the ABC transporters
           [Verrucomicrobium spinosum DSM 4136]
          Length = 255

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 9/244 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--YVIWLGCITMFRVVVLIIIASII 400
            L   W  +                V  + +  +L   +     +T  R+++   I  ++
Sbjct: 13  GLVGIWQAICAAGIWSPVLLPEPLTVGRYLWAAILDGSLAESAWVTSKRLLIGYAIGCLL 72

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+G+       +S  +   A  L   P+  + PL +             +  +++ GT
Sbjct: 73  GLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLALLWFG----QSEAAMLFVVVMGT 128

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W +L  V  G    P  +   A +    G+   R +ILP   PY V+G       AW +
Sbjct: 129 LWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHTLRSVILPASLPYVVSGMKQGWAFAWRS 188

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
            + +E+       L   GLG  +    E  S  +V+  +L++    L  ++ L+ P   +
Sbjct: 189 LMAAEIYV---TILTGYGLGHLLHFGRELNSMDQVIGVMLVIVLIGLLADKVLFSPWERF 245

Query: 581 GTRC 584
               
Sbjct: 246 LHHR 249



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 106/255 (41%), Gaps = 12/255 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+   +      V +   I    +        P  +   +   +   SL + A  T+ R
Sbjct: 2   KRVLIIVAFFAGLVGIWQAICAAGIWSPVLLPEPLTVGRYLWAAILDGSLAESAWVTSKR 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    I  L       L A+SR L   +  +   +Q++P + ++   +++F        
Sbjct: 62  LLIGYAIGCLLGLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLALLWFGQ------ 115

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             +E A +F +    +W++  ++   + N+P      +R+    G+     + +P S+P 
Sbjct: 116 --SEAAMLFVVVMGTLWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHTLRSVILPASLPY 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  M    +  W  ++A+E+ V   T++   G+G  +    +   +  ++  ML ++ +
Sbjct: 174 VVSGMKQGWAFAWRSLMAAEIYV---TILTGYGLGHLLHFGRELNSMDQVIGVMLVIVLI 230

Query: 252 IFLYDQLLFRPMIVW 266
             L D++LF P   +
Sbjct: 231 GLLADKVLFSPWERF 245


>gi|281178065|dbj|BAI54395.1| sulfonate ABC transporter permease component [Escherichia coli
           SE15]
          Length = 264

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R+L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRELVEMARSYGLSGMPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 90/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G      +  E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRELVEMARSYGLSGMPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|318059076|ref|ZP_07977799.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces sp. SA3_actG]
          Length = 394

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 92/234 (39%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++  T          + +D   L + A  +   ++ A VI+L+    
Sbjct: 51  LLLAGILAVLAFWLRGLTAGVLSFAGFAL-IDSLELWEPAMNSFALIIVATVIALVIGVP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S+R   ++ P+LD  Q++P + +L   + +F    P          I A    
Sbjct: 110 LGIWTARSQRASAIVRPLLDFTQTMPAMVYLIPAIFFFGVGVP--------TGIVATIIF 161

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +  +  + + +P ++P ++  +   +     
Sbjct: 162 GFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGVNQVIMLNLS 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + M+  G            +  AI   D+     A ++++ +    D+++
Sbjct: 222 MVVIAGMVGAGGLGGS-------VYQAIGNADINLGSEAGISIVVLAIFLDRVV 268



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 5/180 (2%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           +    ++  +A  +   + G +    F   D L +      +   ++V  +IA +I +P+
Sbjct: 51  LLLAGILAVLAFWLRGLTAGVLSFAGFALIDSLELWEPAMNSFALIIVATVIALVIGVPL 110

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW       S+ ++P        PA V+    +           +   +          
Sbjct: 111 GIWTARSQRASAIVRPLLDFTQTMPAMVYLIPAIFFFGVGVPTGIVATIIFGFA----PA 166

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G         +  +++
Sbjct: 167 VRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGVNQVIMLNLSMVVIA 226


>gi|206974073|ref|ZP_03234991.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus H3081.97]
 gi|206748229|gb|EDZ59618.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus H3081.97]
          Length = 503

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 79/204 (38%), Gaps = 23/204 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIKE 235
            W + +P ++P ++  +  +M           +++VG       I   G+G  I L I  
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAALIGASGLGKLILLGIDR 174

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D   I+   +    +   +D +L
Sbjct: 175 NDHALIILGAVPAALLALFFDIVL 198



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +          +GLG  I    ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIG-------ASGLGKLILLGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|91778491|ref|YP_553699.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296156328|ref|ZP_06839167.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1]
 gi|91691151|gb|ABE34349.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|295893834|gb|EFG73613.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1]
          Length = 300

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISLL         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTLISLLLGVPLGIWTAKSRTIEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  + WQ  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 76/247 (30%), Gaps = 11/247 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              E+F  +  +   +  +       V      + W+   + +                I
Sbjct: 31  KVIESFAAVIEHGLQAVPMWALMAFFVGIGLWRVGWRFALFTLLAMLLIYGTGFWDQMVI 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   +I+ ++ +P+GIW      I   ++P   L+   PA V+            
Sbjct: 91  TLGLTLSSTLISLLLGVPLGIWTAKSRTIEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGR 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L   +  +             G      +  E   +F  T W+    +  P   P 
Sbjct: 151 VPGILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       A +  I++ +   G       GLG  +  S ++          L +   
Sbjct: 207 IMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVML 259

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 260 AIILDRI 266


>gi|171317503|ref|ZP_02906693.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097332|gb|EDT42177.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 270

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G        +    Q++   PA    PLV+                L+  G  + +  N 
Sbjct: 96  GLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVALGVFFPVYINT 151

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +   +  E+A S+ + G+  +R +ILPG  P  + G   A G  W   IV+E  S
Sbjct: 152 YHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS 211

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   +G+G     + E      VV+G+L+        +  
Sbjct: 212 ------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVL 249



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA ++V  +   +     +    P  +V      +    +      +T R L    I   
Sbjct: 27  LALLVVWEVGARVGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGFAIGGG 86

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S+   + L   + ++++IP L  +   +++F           E A +F 
Sbjct: 87  IGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFL 138

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + Y  + ++  +L E+++S+ + G+  +  + +P ++P ++  +  ++ 
Sbjct: 139 VALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALG 198

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D L   
Sbjct: 199 LMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKW 252

Query: 259 LFRPMIVWSNKFR 271
           + R  + W   ++
Sbjct: 253 IERTTLRWHPAYQ 265


>gi|16264715|ref|NP_437507.1| putative taurine uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307303435|ref|ZP_07583189.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307318716|ref|ZP_07598149.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15140853|emb|CAC49367.1| putative taurine uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|306895743|gb|EFN26496.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306902826|gb|EFN33418.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 275

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 87/242 (35%), Gaps = 21/242 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVV 391
           +L    F  +  +   + W    ++ +     D   +                 ++ RV+
Sbjct: 30  LLTALAFIALWLLVTEMGWIKPLFLPSPLAVWDKFVIALTEGVSNSTLAQHTLASLGRVL 89

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              ++A +  +PVGI +G    +     P  +     P   + PL++  +      P ++
Sbjct: 90  GAFLLALVTAVPVGILMGVNRVVRGLFDPIIEFYRPLPPLAYLPLIIIWLGIGEF-PKVF 148

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  L IF     +     AG  +   +    A +   T  +   ++IL    P   TG  
Sbjct: 149 LIYLAIFA---PMAIAARAGVRSVSTEQIHAAYAMGATRAQVIGHVILKAALPEIFTGMR 205

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G  W   + +E+ +         GLG  +  + E  +   V++G++++  F  A + 
Sbjct: 206 IGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAEYLASDTVIMGIVVIGVFAFAFDL 259

Query: 572 FL 573
            +
Sbjct: 260 MI 261



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 101/255 (39%), Gaps = 22/255 (8%)

Query: 23  LAFVLVIGIINILLHGI-QETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMV 77
           LAF+ +  ++  +          P  + D   I L       +L Q+   +  R+L A +
Sbjct: 34  LAFIALWLLVTEMGWIKPLFLPSPLAVWDKFVIALTEGVSNSTLAQHTLASLGRVLGAFL 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++L+       L   +R +  +  PI++  + +P L +L   +++            E  
Sbjct: 94  LALVTAVPVGILMGVNRVVRGLFDPIIEFYRPLPPLAYLPLIIIWLGIG--------EFP 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F I+ +    M  +    + ++  +    + +   +  Q   ++ +  ++P +   M 
Sbjct: 146 KVFLIYLAIFAPMAIAARAGVRSVSTEQIHAAYAMGATRAQVIGHVILKAALPEIFTGMR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +    F +D 
Sbjct: 206 IGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAEYLASDTVIMGIVVIGVFAFAFDL 259

Query: 257 --QLLFRPMIVWSNK 269
             + L + +I W  K
Sbjct: 260 MIRYLEKALIPWKGK 274


>gi|154149711|ref|YP_001403329.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Methanoregula boonei 6A8]
 gi|153998263|gb|ABS54686.1| binding-protein-dependent transport systems inner membrane
           component [Methanoregula boonei 6A8]
          Length = 310

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 73/173 (42%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     +A    IP+G+++G++  +     P A+ ++  P   + P  +  +  + 
Sbjct: 120 SLALLGAGYALALATAIPIGLYLGWKKRLFDVAYPIAKAVSPIPPTAYLPYTIVLLPTFA 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+  G  W IL   + G  +        A +  ++     R ++ PG  P 
Sbjct: 180 TS----SIFLIFIGAFWPILVGSVYGVFSIDRRLINSAKTLGLSERDILRKVLFPGALPS 235

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             +GA  A   ++    V+E+ +       T+GLG YI  + +  ++ +V+ G
Sbjct: 236 IFSGAFIALIMSFITLTVAEMIA------ATSGLGWYIQYNHDFANYDKVIAG 282



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 14/219 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+  I    L  +     P           D   +      +   + +   ++L     
Sbjct: 78  LLIWEIAFGKLVLLDPLLFPGPAKVFAVFGADYSLMLTGLVNSLALLGAGYALALATAIP 137

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                   +RL  V  PI   +  IP   +L +T+V               ++IF IF  
Sbjct: 138 IGLYLGWKKRLFDVAYPIAKAVSPIPPTAYLPYTIVLL--------PTFATSSIFLIFIG 189

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             W +       + +I R L   +++  LS       +  P ++P +     +++   + 
Sbjct: 190 AFWPILVGSVYGVFSIDRRLINSAKTLGLSERDILRKVLFPGALPSIFSGAFIALIMSFI 249

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            +  +EMI          G+G YI       +   ++  
Sbjct: 250 TLTVAEMIA------ATSGLGWYIQYNHDFANYDKVIAG 282


>gi|114762783|ref|ZP_01442217.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Pelagibaca bermudensis HTCC2601]
 gi|114544693|gb|EAU47699.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 278

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++++  + I     +       +       L+     +  + +   +LS+ ++ +    
Sbjct: 54  LIVILTFVAITYALQRNWKTALFVFAGFLFILNQDY-WEETTESLTLVLSSCLVCMAIGV 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA   ++   L PILD+MQ++P   +L   +V+F     G V G     IF +  
Sbjct: 113 PIGIYAAHRPKVYTYLRPILDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPA 169

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     Y  + + P+ L E + +F  +  Q  + + +P+++P ++  +  ++    
Sbjct: 170 P-----IRLTYLGVSSTPKALLEAATAFGATPTQTLYKVELPYAVPQIMAGLNQTIMLSL 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + ++          G+G  +  A+ + +      +   ++ V  + D++L
Sbjct: 225 SMVVVAALV-------GADGLGVPVVRALNQVNTALGFESGFVIVVVAIMLDRIL 272



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 11/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +    V    A+   W++  ++   F +            ++  V+   ++   I +P
Sbjct: 54  LIVILTFVAITYALQRNWKTALFVFAGFLFILNQDYWEETTESLTLVLSSCLVCMAIGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI+   RP + + ++P   L+   P  V+    +       +   +   + ++      
Sbjct: 114 IGIYAAHRPKVYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S+ P    E A++F  T  +    + LP   P  + G       + +  +V
Sbjct: 171 IRL-TYLGVSSTPKALLEAATAFGATPTQTLYKVELPYAVPQIMAGLNQTIMLSLSMVVV 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +  + +         ++    + L+R L
Sbjct: 230 AALVG-------ADGLGVPVVRALNQVNTALGFESGFVIVVVAIMLDRIL 272


>gi|91780304|ref|YP_555511.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692964|gb|ABE36161.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 272

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 18/253 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLP 62
                 R +      +   LV+GI    ++       +    P  ++           LP
Sbjct: 12  SAGTGARRWTRFRRGVILPLVLGITWWAVYAFGWAHSRMFVPPAQVIRTGLAMSFDGELP 71

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R L  + I  L  F +A     +R +   + P    ++ + +  ++     +
Sbjct: 72  GAWLASLGRDLLGLAIGSLCGFGFALFLKSARWIDAAIAPTFHAIRQVALFAWIPLLGTW 131

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     GKV+   LAA F         +  +  Q L  +PR  +E++  FR + WQ+F  
Sbjct: 132 FGLGEVGKVVFISLAAFF--------PVWLNAAQGLEAVPRHYDELADVFRFTRWQRFRR 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P  +P L     +++   W   + +E+++         GIG+ +    +   +  +L
Sbjct: 184 IVLPAIVPSLFNGFYLALVTSWIATLGAELLMTSGV-----GIGTVLNDGRENFRMDQVL 238

Query: 243 YAMLTMLGVIFLY 255
             +  +    F +
Sbjct: 239 LGVAVVGLTGFAF 251



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 11/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
             + +      +  +L I W+ V         +       I           +      +
Sbjct: 18  RRWTRFRRGVILPLVLGITWWAVYAFGWAHSRMFVPPAQVIRTGLAMSFDGELPGAWLAS 77

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R ++ + I S+      +++     I + I P    +       + PL+ +      +
Sbjct: 78  LGRDLLGLAIGSLCGFGFALFLKSARWIDAAIAPTFHAIRQVALFAWIPLLGTWFGLGEV 137

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +     + +  N   G  A P  + E+A  F  T W+ +R I+LP I P  
Sbjct: 138 GK----VVFISLAAFFPVWLNAAQGLEAVPRHYDELADVFRFTRWQRFRRIVLPAIVPSL 193

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   +W A++ +E+     +     G+G  + +  E     +V+LGV ++    
Sbjct: 194 FNGFYLALVTSWIATLGAELLMTSGV-----GIGTVLNDGRENFRMDQVLLGVAVVGLTG 248

Query: 567 LALNRF 572
            A + F
Sbjct: 249 FAFHSF 254


>gi|196043522|ref|ZP_03110760.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus 03BB108]
 gi|225864887|ref|YP_002750265.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus 03BB102]
 gi|196025831|gb|EDX64500.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus 03BB108]
 gi|225788823|gb|ACO29040.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus 03BB102]
          Length = 282

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|296446867|ref|ZP_06888804.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
 gi|296255638|gb|EFH02728.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
          Length = 247

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 17/246 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           ++    +  L+ F+    +  +L  G      VP  +                   +   
Sbjct: 2   KQRLAALLGLVLFLGAWELAPLLTPGAHALLPVPSQLPGAFWREFQNGVWLACVGASLSH 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L  + + + F             L      I  I++ IP L ++ F +++F        
Sbjct: 62  YLIGLGVGVAFGVAAGVATGALPPLEWATAWITRILRPIPGLAWIPFAILWFGVE----- 116

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMP 190
              E AA+F I     W + FS + ++ N+ RDL EV+ +F   + W+K   +  P S+P
Sbjct: 117 ---EKAAVFIIAIGVFWIVYFSAHGAIRNVDRDLVEVAAAFGFRTSWEKLVKVQFPASLP 173

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G++  +  S+   W  VVA+E+  V        G+G  +  A        ++  MLTM  
Sbjct: 174 GILVGVRTSLGQAWMAVVAAELFGVA-------GLGQRMNQASSLLATDIVVVYMLTMAA 226

Query: 251 VIFLYD 256
           +  L D
Sbjct: 227 LYGLID 232



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 14/230 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPV 404
            W           A   +   +    +++    +WL C+  ++   ++ + +     +  
Sbjct: 17  AWELAPLLTPGAHALLPVPSQLPGAFWREFQNGVWLACVGASLSHYLIGLGVGVAFGVAA 76

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+  G  P +        ++L   P   + P  +                ++  G  W +
Sbjct: 77  GVATGALPPLEWATAWITRILRPIPGLAWIPFAILWFGVE----EKAAVFIIAIGVFWIV 132

Query: 465 LFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            F+          D  EVA++F     W     +  P   P  + G  T+ G AW A + 
Sbjct: 133 YFSAHGAIRNVDRDLVEVAAAFGFRTSWEKLVKVQFPASLPGILVGVRTSLGQAWMAVVA 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +E+           GLG  + +++   +   VV+ +L M      ++   
Sbjct: 193 AELFG-------VAGLGQRMNQASSLLATDIVVVYMLTMAALYGLIDMAF 235


>gi|94263656|ref|ZP_01287465.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
 gi|93455961|gb|EAT06116.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
          Length = 268

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++FR     ++A+++ +P+G+ +G+   +   + P  Q+L       +FPL V     
Sbjct: 74  AVSLFRFGTAYLLAAVLALPLGLLLGWFTRLHRALDPLIQILRPISPVAWFPLAVLWFKI 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L     + +   F     IL + IA   +    + +VA +F  + W     +++P  F
Sbjct: 134 GDLPAIFIIFIASFF----PILLSTIAAVRSVEATYIKVALNFGSSQWSLLHKVVIPAAF 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY   G   A G  W   +  E+          +GLG +I ++        V++G+L++ 
Sbjct: 190 PYITVGMHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIVGMLLVG 243

Query: 564 CFVLALNRFL 573
              L L+R +
Sbjct: 244 ALGLLLDRLM 253



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 98/248 (39%), Gaps = 14/248 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             R +  +  +L F+L+                P  +   +        L ++ + +  R
Sbjct: 20  GERFWAPLLAVLLFLLLWEAAARFYANHYLLPGPWQVGLGLVEVWRGGLLLEHIAVSLFR 79

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
             +A +++ +       L     RL   L P++ I++ I  + +    V++F        
Sbjct: 80  FGTAYLLAAVLALPLGLLLGWFTRLHRALDPLIQILRPISPVAWFPLAVLWFKIG----- 134

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +L AIF IF +  + +  S   ++ ++     +V+ +F  S W     + +P + P 
Sbjct: 135 ---DLPAIFIIFIASFFPILLSTIAAVRSVEATYIKVALNFGSSQWSLLHKVVIPAAFPY 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M +++  GW  +VA EM+          G+G +I  A        ++  ML +  +
Sbjct: 192 ITVGMHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIVGMLLVGAL 245

Query: 252 IFLYDQLL 259
             L D+L+
Sbjct: 246 GLLLDRLM 253


>gi|302389901|ref|YP_003825722.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302200529|gb|ADL08099.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 246

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 85/233 (36%), Gaps = 10/233 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + L +  + +   V           +  +        +     ++++R++  +I + +I
Sbjct: 12  IFFLIVILWHIASAVVKSPLLPPPAAVFYNLREVFFSKIAPHAALSIYRIIAGLIFSVLI 71

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
              +G+ +GF   +   + P    +   P     P+V+       L+       +++  T
Sbjct: 72  GSILGLLMGFYHSVDRVLSPVIYFIYPIPKIALLPIVMILFGLGELSK----ITMIVIIT 127

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I+  +       P +     +S        ++ IILP   P  +T      G A + 
Sbjct: 128 VFQIIITMRDTVKNIPKEMFYSLTSLGAGDIVVFKEIILPAAAPELLTALRLGTGTAISV 187

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +E            G+G +I ++  + ++ ++  G+L++    L L  F+
Sbjct: 188 LFFTE------NFGTVQGIGYFIMDAWMRVNYIDMYSGILVLGGIGLILFSFV 234



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            + F++VI               P   V      +    +  +A+ +  R+++ ++ S+L
Sbjct: 11  FIFFLIVILWHIASAVVKSPLLPPPAAVFYNLREVFFSKIAPHAALSIYRIIAGLIFSVL 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L      +  VL P++  +  IP +  L   ++ F           EL+ I  
Sbjct: 71  IGSILGLLMGFYHSVDRVLSPVIYFIYPIPKIALLPIVMILFGLG--------ELSKITM 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    V+ +  +M  ++ NIP+++     S        F  + +P + P L+  + +   
Sbjct: 123 IVIITVFQIIITMRDTVKNIPKEMFYSLTSLGAGDIVVFKEIILPAAAPELLTALRLGTG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  A  ++   +    + GIG +I  A    + + +   +L + G+  +    +
Sbjct: 183 ------TAISVLFFTENFGTVQGIGYFIMDAWMRVNYIDMYSGILVLGGIGLILFSFV 234


>gi|163857217|ref|YP_001631515.1| taurine ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163260945|emb|CAP43247.1| taurine ABC transporter, permease protein [Bordetella petrii]
          Length = 238

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV++ +++  ++ +PVG  +G+   + S + P      A P     PLV+     
Sbjct: 44  LMSTQRVLLGVLLGIVLAVPVGFVLGWYKSVRSFVDPVINFFRALPPIALIPLVIVYFGI 103

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++ + + +  +  +  G +     +  V+ +   +    +R +I+P   
Sbjct: 104 G----ESAKIAILFYASFFAGVIVMYEGIAQINPIYVRVSRTLGASDGEIFRKVIVPLTI 159

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +T    A G AW   + SE+ +         GLGA I +++       + +G++ + 
Sbjct: 160 PHMLTALRVALGVAWATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIG 213

Query: 564 CFVLALNRFLW---HPLYLYGTR 583
              L ++  L      L  +  R
Sbjct: 214 LIALVMDLILRAAARRLVAWQER 236



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 97/249 (38%), Gaps = 22/249 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPI-----TLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           + ++            P  +     +      L    LP     +T R+L  +++ ++  
Sbjct: 2   LIVLAWYGVRASGLVSPALVPSPHEVLSKFLALMQTRLPHDILMSTQRVLLGVLLGIVLA 61

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                +    + +   + P+++  +++P +  +   +VYF           E A I  +F
Sbjct: 62  VPVGFVLGWYKSVRSFVDPVINFFRALPPIALIPLVIVYFGIG--------ESAKIAILF 113

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +     MY+ +  I      VSR+   S  + F  + VP ++P ++  + +++   
Sbjct: 114 YASFFAGVIVMYEGIAQINPIYVRVSRTLGASDGEIFRKVIVPLTIPHMLTALRVALGVA 173

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---F 260
           W  +VASE+I          G+G+ I  A     L  I   ++ +  +  + D +L    
Sbjct: 174 WATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIGLIALVMDLILRAAA 227

Query: 261 RPMIVWSNK 269
           R ++ W  +
Sbjct: 228 RRLVAWQER 236


>gi|226944345|ref|YP_002799418.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
 gi|226719272|gb|ACO78443.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ]
          Length = 277

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 89/229 (38%), Gaps = 17/229 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++          L    S +  R+L    I      +       SRR+   L+
Sbjct: 59  LPPPSRVLETFGELWASGDLWFQLSISLQRVLVGSAIGGALGLLLGLAMGLSRRVEAYLL 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  +P+LG++   ++        K +         I  + +  +T + +  + NI
Sbjct: 119 PLFQAISQVPVLGWIPLLMMLVGIDETLKYL--------VIAKAVLVPLTINTFSGIRNI 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P    EV+R +R     +   + +P ++P +   +  +++ GW  +V  E++   +    
Sbjct: 171 PPSYLEVARVYRFGLLLRLRRVILPAALPSIFTGVRFALTKGWIALVTVELLASSE---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
             GIG  +    +   L  ++ AML +  V  + DQ   L+   +  W 
Sbjct: 227 --GIGYLMVDGRQMFQLDLVIVAMLVIGLVGLVLDQGLALIETRLRRWQ 273



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 13/212 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   I++ RV+V   I   + + +G+ +G    + + + P  Q ++  P   + PL
Sbjct: 76  GDLWFQLSISLQRVLVGSAIGGALGLLLGLAMGLSRRVEAYLLPLFQAISQVPVLGWIPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V            L++       +  N  +G    P  + EVA  +        R 
Sbjct: 136 LMMLVGI----DETLKYLVIAKAVLVPLTINTFSGIRNIPPSYLEVARVYRFGLLLRLRR 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P   TG   A    W A +  E+ +       + G+G  + +  +      V+
Sbjct: 192 VILPAALPSIFTGVRFALTKGWIALVTVELLA------SSEGIGYLMVDGRQMFQLDLVI 245

Query: 557 LGVLIMCCFVLALNR---FLWHPLYLYGTRCL 585
           + +L++    L L++    +   L  +  +  
Sbjct: 246 VAMLVIGLVGLVLDQGLALIETRLRRWQRQAF 277


>gi|150402039|ref|YP_001329333.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
 gi|150033069|gb|ABR65182.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C7]
          Length = 277

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   ++++ +I+L+F   +  + A+S+ +  +L P+LD+MQ++P L +L   
Sbjct: 85  GLWDTSMITLSLIITSTLIALIFGIPFGIVKARSKLVSTLLDPLLDVMQTLPSLAYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     IFA+  +            +  +  +L EV ++F  + WQ 
Sbjct: 145 VLFFG---IGEVPGVIATVIFAMPPA-----IKLTSLGIEQVSEELIEVGKAFGGTSWQI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L 
Sbjct: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLA 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A + +  +  ++D++
Sbjct: 250 PALEAGIAVTFLAVIFDRI 268



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++  +   + W+++      FT   ++ ++ +G      IT+  ++   +IA I  IP 
Sbjct: 52  YLMIILISILVWKTVNLKSVPFTAFFLVIILMMGLWDTSMITLSLIITSTLIALIFGIPF 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +S+ + P   ++   P+  +    V       +   +   +          
Sbjct: 112 GIVKARSKLVSTLLDPLLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIF----AMPPA 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  EV  +F  T W+    I LP   P  + G   A   +++  +++
Sbjct: 168 IKLTSLGIEQVSEELIEVGKAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                G       GLG  I    ++ S    +   + +    +  +R 
Sbjct: 228 GFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268


>gi|84686267|ref|ZP_01014162.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665794|gb|EAQ12269.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Rhodobacterales bacterium HTCC2654]
          Length = 277

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 100/234 (42%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L++ +  +L   +Q+       V +  + +      +  + +   +LSA V+ +     
Sbjct: 54  LLIVAVFAVLTWFLQKNWKIVVFVVLGFLFIMNQGYWEETTESLTLVLSACVVCMAIGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   +L   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 IGIAAAHRPKLYAGMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLLATVIFVLPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + + P  L+E +++F  +G Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTHLGISSTPMALKEAAQAFGATGRQLLWKVELPYALPQIMTGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+ + +      +   ++ V  + D++L
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNQVNTALGFESGFVIVVVAIILDRML 272



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 82/234 (35%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L I     V    +   W+ + ++V  F +            ++  V+   ++   
Sbjct: 50  TPPPLLIVAVFAVLTWFLQKNWKIVVFVVLGFLFIMNQGYWEETTESLTLVLSACVVCMA 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + ++  
Sbjct: 110 IGVPIGIAAAHRPKLYAGMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P   KE A +F  TG +    + LP   P  +TG       + +
Sbjct: 170 ---PIRL-THLGISSTPMALKEAAQAFGATGRQLLWKVELPYALPQIMTGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +         ++    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTALGFESGFVIVVVAIILDRML 272


>gi|157146316|ref|YP_001453635.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895]
 gi|157083521|gb|ABV13199.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895]
          Length = 256

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 67/173 (38%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R +    +A +I IP+G+ +G    +++ + PF Q L   P     PL V  +  
Sbjct: 63  AVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAVVWLGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+   T   ++    A           VA +   +  + +  ++LP   
Sbjct: 123 GEASK----FFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIFLRVVLPDAL 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P   T    + G  W + I +E+ +       ++GLG  +  ++       V+
Sbjct: 179 PELFTTVRLSIGIGWTSLIAAEMVA------ASSGLGWMVVNASSYLRTDIVM 225



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 19/238 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQY 64
            +S  I  ++  +  F +V  +  +              + +    L         L ++
Sbjct: 2   RLSYHIAISVVSVAIFFIVWQVATMRQWVDPLLLPSLQDIGLTTEELLADGYRQVPLWEH 61

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R LSA  +++L       L   S  L  VL P +  ++ +P +  +   VV+  
Sbjct: 62  VAVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAVVWLG 121

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E +  F IF +   ++      ++  I R    V+++   S  Q F  + 
Sbjct: 122 IG--------EASKFFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIFLRVV 173

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P ++P L   + +S+  GW  ++A+EM+          G+G  +  A        ++
Sbjct: 174 LPDALPELFTTVRLSIGIGWTSLIAAEMVAASS------GLGWMVVNASSYLRTDIVM 225


>gi|289641903|ref|ZP_06474059.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
 gi|289508312|gb|EFD29255.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
          Length = 254

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  V+        +   Q    P  ++           LP+ A  +  R  +  VI   
Sbjct: 12  LVLLVIWEAFARSGVISTQVLPAPTKVLSTARELTASGQLPKDALISLRRAATGFVIGGG 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SR    VL   + +++++P L  L   +V+F     GK        +F 
Sbjct: 72  IGLALGVAVGFSRLADAVLDRPIQMIRAVPFLAILPLVIVWFGVGESGK--------VFL 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +       +  +    +  +   L E+ R   L   Q    + +P ++P ++  + ++++
Sbjct: 124 VALGVATPIYLNTVLGIRQVDPKLLELGRVIGLPQRQLIRRIVLPGALPSILNGIRLAIT 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V +E +          GIG     A +      I+ A+L    +  L D   ++
Sbjct: 184 TAWLALVVAETVGADS------GIGFMAMDAREFLRTDVIVLAILIYAAIGILSDLAARV 237

Query: 259 LFRPMIVWSNKF 270
           L R ++ W   +
Sbjct: 238 LERRLLSWHPNY 249



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 73/207 (35%), Gaps = 13/207 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++ R     +I   I + +G+ +GF     + +    Q++ A P     PL
Sbjct: 49  GQLPKDALISLRRAATGFVIGGGIGLALGVAVGFSRLADAVLDRPIQMIRAVPFLAILPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G    I  N + G         E+     +   +  R 
Sbjct: 109 VIVWFGVGESGK----VFLVALGVATPIYLNTVLGIRQVDPKLLELGRVIGLPQRQLIRR 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LPG  P  + G   A   AW A +V+E           +G+G    ++ E      +V
Sbjct: 165 IVLPGALPSILNGIRLAITTAWLALVVAETVG------ADSGIGFMAMDAREFLRTDVIV 218

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580
           L +LI     +  +   R L   L  +
Sbjct: 219 LAILIYAAIGILSDLAARVLERRLLSW 245


>gi|111114968|ref|YP_709586.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia afzelii PKo]
 gi|216263786|ref|ZP_03435780.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia afzelii ACA-1]
 gi|110890242|gb|ABH01410.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia afzelii PKo]
 gi|215979830|gb|EEC20652.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia afzelii ACA-1]
          Length = 299

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 86/208 (41%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++ +S++       L     R  + L PILD+MQ++P   +L   
Sbjct: 83  NLWEASMDTIAIIFVSVFVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +  ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TASAIFATIVFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSSLRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +  
Sbjct: 195 LLQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVIIAIILDRIMQSIFIKFS 275



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 82/217 (37%), Gaps = 11/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +  + +  I+  F +     +      T+  + V + ++ I+ IP+GI  G+ P    
Sbjct: 62  VFLKKRLVFLILPGFFFILYFNLWEASMDTIAIIFVSVFVSVILGIPIGILGGYFPRFYV 121

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P   L+ A P  ++    +        +      +         ++     G     
Sbjct: 122 FLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIVF----AMPPVIRYTRLGIVQVS 177

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           ++  E A SF  +  R    + LP      + G   +   A +  +++ +         +
Sbjct: 178 DEVIEAAKSFGSSSLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVG-------S 230

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 231 SGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIM 267


>gi|326444429|ref|ZP_08219163.1| putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 288

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFT 372
                  G  R   P    +L      S+                 A + +  Y+V    
Sbjct: 8   GAPRDAPGAARRKGPTAGERLARAAGRSWRPAALLLVCCAAWWATAAAELVEPYLVPSPG 67

Query: 373 ------YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                   +  ++     +T +  ++   IA  + +   + +   P +   + P      
Sbjct: 68  ATFDVLTGEADHLWRHTWVTTYETLLGFGIAVAVGVLSAVVMVSSPTVEKTLYPVLLFAQ 127

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL V  + +          L+ +    + ++ +++ G  A   +  +++++ 
Sbjct: 128 VIPKIAIAPLFVVWLGFG----IAPKILIAVLIAFFPVVISMVTGLKAVDPEMLQLSATM 183

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+ +  I  P   P+  +G   A   A   ++V E            GLG  I ++
Sbjct: 184 GARPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVG------ADEGLGYVILQA 237

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 P +   +L+M    + L   +
Sbjct: 238 NGNLDTPMLFAALLVMSLIGVVLFVLV 264



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            VP        +T +   L ++   TT   L    I++    + A +   S  +   L P
Sbjct: 62  LVPSPGATFDVLTGEADHLWRHTWVTTYETLLGFGIAVAVGVLSAVVMVSSPTVEKTLYP 121

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L   Q IP +      VV+       K++ A L A F         +  SM   L  + 
Sbjct: 122 VLLFAQVIPKIAIAPLFVVWLGFGIAPKILIAVLIAFF--------PVVISMVTGLKAVD 173

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            ++ ++S +     WQ F  +  P S+P L   + ++++       A    VVG+ V   
Sbjct: 174 PEMLQLSATMGARPWQTFVKIRFPASLPHLFSGLKVAVTL------AVTGAVVGEFVGAD 227

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
            G+G  I  A    D   +  A+L M  +  +   L+    R ++ W 
Sbjct: 228 EGLGYVILQANGNLDTPMLFAALLVMSLIGVVLFVLVEAAERLLLPWH 275


>gi|134298313|ref|YP_001111809.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134051013|gb|ABO48984.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 251

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 14/198 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++FR ++  I++ ++ +P+G+ +G        IQPF   L   P   +  L +       
Sbjct: 61  SLFRGLMGFILSVMVGMPLGLLMGINNLARRFIQPFVVTLQVVPVISWLVLAMVWFGSER 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +        +++  T   I+FNV+ G       + E+A  F +        I  P I PY
Sbjct: 121 VP-----VFVVVITTLPLIIFNVVQGVMNVEAQYTEMAKVFKVNKKEVLLKIYFPQILPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           ++    +A G  W A  ++E  S         G+GA ++ +       EV    L++   
Sbjct: 176 FLAAMSSALGTTWKAVAMAEFLS------AQKGIGAGMSVARINLETQEVFAWTLLLVLL 229

Query: 566 VLALN---RFLWHPLYLY 580
            L  +   R L   L  +
Sbjct: 230 GLLTDNGLRLLQKRLTAW 247



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 93/230 (40%), Gaps = 18/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P + V  +        + ++   +  R L   ++S++       L   +      + 
Sbjct: 35  LPSPYETVQALLQLCISGRIWEHTVNSLFRGLMGFILSVMVGMPLGLLMGINNLARRFIQ 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  +Q +P++ +L   +V+F         G+E   +F +  + +  + F++ Q + N+
Sbjct: 95  PFVVTLQVVPVISWLVLAMVWF---------GSERVPVFVVVITTLPLIIFNVVQGVMNV 145

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E+++ F+++  +    +  P  +P  +  M  ++   W  V  +E +        
Sbjct: 146 EAQYTEMAKVFKVNKKEVLLKIYFPQILPYFLAAMSSALGTTWKAVAMAEFLS------A 199

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             GIG+ +++A    +   +    L ++ +  L D   +LL + +  W +
Sbjct: 200 QKGIGAGMSVARINLETQEVFAWTLLLVLLGLLTDNGLRLLQKRLTAWRD 249


>gi|309778981|ref|ZP_07673751.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308922328|gb|EFP67955.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 269

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 19/213 (8%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   ++   I +++ I +G+W+G     +  + PF ++  A P  +
Sbjct: 59  WFTGGDIYTHLAITLAETILSFGIGTLLGISLGLWLGLSKLAAEVLDPFIKVFNAIPRIL 118

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ V        +     + +++F T     FN   G           A     +   
Sbjct: 119 LAPIFVMWFGLGLTSKVALGATMVLFITF----FNTYQGVREVNPVILANARLLKASRIS 174

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ +P    + ++    + G A   +IV+E          + GLG  IA++      
Sbjct: 175 LLRHVYVPSATSWILSSLRASVGMAVMGAIVAEYLG------SSAGLGHLIAQAEGVFDA 228

Query: 553 PEVVLGVLIMCCFVLALNR---------FLWHP 576
             V  G++++  FV+AL+R          +W P
Sbjct: 229 TGVFSGIVVLSAFVIALDRSVDALEGKLLVWRP 261



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 23/229 (10%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           ++P  IV  +        +  + + T    + +  I  L           S+    VL P
Sbjct: 47  SMPSSIVARIWEWFTGGDIYTHLAITLAETILSFGIGTLLGISLGLWLGLSKLAAEVLDP 106

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +  +IP +      V++F      KV       +F  F        F+ YQ +  + 
Sbjct: 107 FIKVFNAIPRILLAPIFVMWFGLGLTSKVALGATMVLFITF--------FNTYQGVREVN 158

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R  + S      ++ VP +   ++ ++  S+       + +E +         
Sbjct: 159 PVILANARLLKASRISLLRHVYVPSATSWILSSLRASVGMAVMGAIVAEYLGSSA----- 213

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---------LLFRP 262
            G+G  IA A    D   +   ++ +   +   D+         L++RP
Sbjct: 214 -GLGHLIAQAEGVFDATGVFSGIVVLSAFVIALDRSVDALEGKLLVWRP 261


>gi|256545911|ref|ZP_05473267.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398607|gb|EEU12228.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Anaerococcus vaginalis ATCC 51170]
          Length = 258

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++FRV V   +A ++   + +    +P I            + P     PL
Sbjct: 52  GSIFANLFASLFRVFVGYFLAFLVSFFLALIFYLKPKIYPYFSNILNFFKSIPPLGLVPL 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +    ++       ++   + + I  N+  G      D  E+A +F       ++ 
Sbjct: 112 LILWLGIGEISK----IAIVFLASFFPIFLNIQKGFMVAEPDLIEMARAFSYNNKEIFKK 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           IILP        GA    G A+ + I +E+ +       + GLG  I  S       +V+
Sbjct: 168 IILPSSLKDIFVGARIGLGYAYRSIIAAEMIA------ASKGLGYLINFSRLMSRTDKVL 221

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+ ++    +  ++  
Sbjct: 222 VGIFLIGFVGMISDKIF 238



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 84/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     L   S+      +  R+     ++ L +F  A +     ++     
Sbjct: 35  LPGPFKVFETFCAMLVDGSIFANLFASLFRVFVGYFLAFLVSFFLALIFYLKPKIYPYFS 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            IL+  +SIP LG +   +++            E++ I  +F +  + +  ++ +     
Sbjct: 95  NILNFFKSIPPLGLVPLLILWLGIG--------EISKIAIVFLASFFPIFLNIQKGFMVA 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL E++R+F  +  + F  + +P S+  +     + +   +  ++A+EMI        
Sbjct: 147 EPDLIEMARAFSYNNKEIFKKIILPSSLKDIFVGARIGLGYAYRSIIAAEMIAASK---- 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  +        +L  +  +  V  + D++ 
Sbjct: 203 --GLGYLINFSRLMSRTDKVLVGIFLIGFVGMISDKIF 238


>gi|118478251|ref|YP_895402.1| alkanesulfonates transport system permease [Bacillus thuringiensis
           str. Al Hakam]
 gi|118417476|gb|ABK85895.1| alkanesulfonates transport system permease [Bacillus thuringiensis
           str. Al Hakam]
          Length = 285

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 48  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILG 107

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 108 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 163

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 164 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 223

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 224 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 265



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 62  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 121

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 122 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 173

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 174 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 228 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 277

Query: 269 KFRLER 274
            F+ E 
Sbjct: 278 NFKGET 283


>gi|187478967|ref|YP_786991.1| glycine betaine/L-proline ABC transporter permease [Bordetella
           avium 197N]
 gi|115423553|emb|CAJ50089.1| glycine betaine/L-proline ABC transporter,permease protein
           [Bordetella avium 197N]
          Length = 285

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 97/241 (40%), Gaps = 21/241 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
             + ++   +VI  +     G          V  +    D         +T   M+ A  
Sbjct: 52  PWWSVVLATIVIAWLVSRRIGFSLAMGALLCVLGLLGLWDAG------MQTLALMIMAAG 105

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S++       + A+   L  +++P+LD+MQ++P   +L   V+ F           ++ 
Sbjct: 106 LSVMIGIPVGIVMARVNWLRSIMLPVLDVMQTMPSFVYLIPVVMLFGLG--------KIP 157

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A     V  +       +  + R++ E SR+F  +  Q+ + + +P ++P ++  + 
Sbjct: 158 ALIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGANSRQQLFGVQLPLALPNIMAGVN 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +       VV + MI          G+G  + L I   ++   L A L ++ +  L+D+
Sbjct: 218 QTTMMALSMVVIASMI-------GARGLGYEVLLGINRLEVGRGLVAGLGIVVLAVLFDR 270

Query: 258 L 258
           +
Sbjct: 271 I 271



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 80/254 (31%), Gaps = 11/254 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           TL  +     +  + L    R S    +    +V    +         +        +L 
Sbjct: 29  TLEALASPVLKVLIWLEQLLRTSPWWSVVLATIVIAWLVSRRIGFSLAMGALLCVLGLLG 88

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   G  T+  +++   ++ +I IPVGI +     + S + P   ++   P+ V+   VV
Sbjct: 89  LWDAGMQTLALMIMAAGLSVMIGIPVGIVMARVNWLRSIMLPVLDVMQTMPSFVYLIPVV 148

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +   +  +      ++     G      +  E + +F     +    + 
Sbjct: 149 MLFGLG----KIPALIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGANSRQQLFGVQ 204

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G       A +  +++ +           GLG  +     +      ++ 
Sbjct: 205 LPLALPNIMAGVNQTTMMALSMVVIASMIG-------ARGLGYEVLLGINRLEVGRGLVA 257

Query: 559 VLIMCCFVLALNRF 572
            L +    +  +R 
Sbjct: 258 GLGIVVLAVLFDRI 271


>gi|91775909|ref|YP_545665.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91709896|gb|ABE49824.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 260

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 97/216 (44%), Gaps = 16/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +    L Q  + +  R    ++I     F    + A  R   +++ P+  +++ +P++G 
Sbjct: 56  ISTGELQQGVAASLQRAFLGLLIGGSIGFGVGAVMALWRVADILIGPLYHMLRQVPLMGL 115

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    ++  N  P K++   L+A +         M  + Y+SL  +    +EV   ++L 
Sbjct: 116 VPLFSLWLGNGDPSKLLVVCLSAFY--------PMVLATYESLHQVEEKYKEVGDVYKLG 167

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAI 233
             + F+ + +P ++P +   +  +++  W   + SE++          G+G+ +  A A 
Sbjct: 168 RSKTFFKILLPAALPSIFTGVSFALAFAWLATIGSEILFSAGA-----GLGNIMMNAQAA 222

Query: 234 KEQDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSN 268
              D+L IL A++ +LG +  L  Q + R +  W N
Sbjct: 223 SRMDILIILTALIGLLGYLMNLLIQQVGRYLFRWRN 258



 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 15/242 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVL 393
             +++ +    V   ++   A  +  +      Y   L +I  G        ++ R  + 
Sbjct: 16  RGWLIPLALLLVWEVMSRQSAEHAYAFASISQIYHGFLEIISTGELQQGVAASLQRAFLG 75

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I   I   VG  +         I P   +L   P     PL    +     +      
Sbjct: 76  LLIGGSIGFGVGAVMALWRVADILIGPLYHMLRQVPLMGLVPLFSLWLGNGDPSK----L 131

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L++     + ++             +KEV   + +   + +  I+LP   P   TG   A
Sbjct: 132 LVVCLSAFYPMVLATYESLHQVEEKYKEVGDVYKLGRSKTFFKILLPAALPSIFTGVSFA 191

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              AW A+I SE+           GLG  +  +        +++   ++      +N  +
Sbjct: 192 LAFAWLATIGSEILFSAG-----AGLGNIMMNAQAASRMDILIILTALIGLLGYLMNLLI 246

Query: 574 WH 575
             
Sbjct: 247 QQ 248


>gi|333023680|ref|ZP_08451744.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332743532|gb|EGJ73973.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 241

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 88/235 (37%), Gaps = 10/235 (4%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++   +    +   P  +   +        L  Y   +  R L   +++L+       L 
Sbjct: 5   LVWAKVTDSYKLPSPGAVWGELSDAWTQGKLLGYIWTSVSRGLFGFLLALVIGTPLGLLV 64

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           ++ R +   + PIL  +QS+P + ++   V++                   I    V ++
Sbjct: 65  SRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGLNSSMMYA--------VILLGAVPSI 116

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
              +   +  +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+
Sbjct: 117 ANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAA 176

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           E+I     +    G+G  +        +  +  A+  +L V    D L+F P+  
Sbjct: 177 EIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 229



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 91/237 (38%), Gaps = 9/237 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              + W  V     +       G + + +T   +L  IW    ++ R +   ++A +I  
Sbjct: 2   WQILVWAKVTDSYKLPSPGAVWGELSDAWTQGKLLGYIW---TSVSRGLFGFLLALVIGT 58

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +     + + I P    L + P+  + P  V  +       +  +  +++ G   
Sbjct: 59  PLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGL----NSSMMYAVILLGAVP 114

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I   +++G    P  +     +   TG R   +I+LP   P Y+ G       +W + +
Sbjct: 115 SIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLM 174

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
            +E+ +         GLG  +       S   V L + ++    +A++  ++ PL  
Sbjct: 175 AAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 229


>gi|325277750|ref|ZP_08143314.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324097124|gb|EGB95406.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 224

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 92/230 (40%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + ++ +L      + +   ++  +   + +  L     +T   +L +  + +L       
Sbjct: 1   MAMVGLLAWHASRSLLRSVVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGI 60

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A       +L+P+LD+MQ++P   +L   ++ F           ++ A+FA     + 
Sbjct: 61  LLAARPLARRLLLPVLDVMQTLPAFVYLIPVLMLFGLG--------KVPAVFATLIYALP 112

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +       L  I   L + +     S WQ+   + +P ++P ++  +  S+      VV
Sbjct: 113 PLVRLTQLGLSQIDPSLLKAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVV 172

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + MI          G+G  +   I+  ++   + A L ++ +  + D++
Sbjct: 173 VASMI-------GARGLGEDVLAGIQTLNVGQGVEAGLAIVALAMVIDRI 215



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 78/226 (34%), Gaps = 17/226 (7%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGI 406
             +   +AW +   ++       +L +I +  +      T+  V+V   +  ++ +P+GI
Sbjct: 1   MAMVGLLAWHASRSLLRSVVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGI 60

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +  RP     + P   ++   PA V+   V+           +      +      ++ 
Sbjct: 61  LLAARPLARRLLLPVLDVMQTLPAFVYLIPVLMLFGLG----KVPAVFATLIYALPPLVR 116

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G S       + A     + W+  R I LP   P  + G   +   A +  +V+ +
Sbjct: 117 LTQLGLSQIDPSLLKAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASM 176

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                      GLG  +    +  +  + V   L +    + ++R 
Sbjct: 177 IG-------ARGLGEDVLAGIQTLNVGQGVEAGLAIVALAMVIDRI 215


>gi|160875189|ref|YP_001554505.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS195]
 gi|160860711|gb|ABX49245.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS195]
 gi|315267385|gb|ADT94238.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS678]
          Length = 283

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LVI +   +   +    +      +  + + +         T   + S++V   L    
Sbjct: 54  LLVIALFGAIAWRVSGLKLAI-FTLLSLVLIGLLGFWSETMITLAMVFSSVVFCTLVGVP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   A +S R+  VL PILD MQ+ P   +L   V+ F             A + A    
Sbjct: 113 FGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLFSIGNT--------AGVLATIIF 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  +L E + +F  +  Q    + +P ++P ++  +  ++     
Sbjct: 165 ALPPLVRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G+ + L +   D+       L ++ +  + D++
Sbjct: 225 MVVIAAMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            +V  +   IAW+  G  +  FT   ++ +  LG      IT+  V   ++  +++ +P 
Sbjct: 54  LLVIALFGAIAWRVSGLKLAIFTLLSLVLIGLLGFWSETMITLAMVFSSVVFCTLVGVPF 113

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW G    +++ ++P    +   PA V+   +V   S  +    L   +         +
Sbjct: 114 GIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLFSIGNTAGVLATIIF----ALPPL 169

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + +P   P  + G       + +  +++
Sbjct: 170 VRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLSMVVIA 229

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLGA +             +G L +    + L+R 
Sbjct: 230 AMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270


>gi|296533152|ref|ZP_06895781.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296266524|gb|EFH12520.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 306

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 87/233 (37%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
             VI +I +L                  + +D   L      T   +L+A   ++L    
Sbjct: 51  PAVIAVIALLALWRVGWKF-SLFALAALLLIDGMGLWVRMMETLSLVLAATGFAILVGVP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S  +  V  P LD+MQ++P   +L    ++F     G V G     IFA+   
Sbjct: 110 LGIAMARSAWVQAVARPALDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIFAMP-- 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       L  +  +  E   +F  +  Q    + +P ++P ++  +  ++     
Sbjct: 165 ---PVVRLTNLGLRQVHSEFIEAGLAFGCTPTQLLLKVQIPNALPSIMAGINQTIMLSLS 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G+ +   I+  D+       L ++ +  L D++
Sbjct: 222 MVVIASMIGAG-------GLGNTVLTGIQRLDVGTGFEGGLAVVVLAVLLDRI 267



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 63/184 (34%), Gaps = 5/184 (2%)

Query: 349 FCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
             V+  +A+  + W+   + +      D + +      T+  V+     A ++ +P+GI 
Sbjct: 54  IAVIALLALWRVGWKFSLFALAALLLIDGMGLWVRMMETLSLVLAATGFAILVGVPLGIA 113

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     + +  +P   L+   PA V+            +   +   +         ++  
Sbjct: 114 MARSAWVQAVARPALDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF----AMPPVVRL 169

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G     ++F E   +F  T  +    + +P   P  + G       + +  +++ + 
Sbjct: 170 TNLGLRQVHSEFIEAGLAFGCTPTQLLLKVQIPNALPSIMAGINQTIMLSLSMVVIASMI 229

Query: 528 SWGH 531
             G 
Sbjct: 230 GAGG 233


>gi|289450331|ref|YP_003475827.1| ABC transporter permease [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184878|gb|ADC91303.1| ABC transporter, permease protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 257

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 10/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  R+ + ++ A +  +P+G   G+   I   +    Q     P   ++PL++  +    
Sbjct: 66  SFVRLFLALLTAFVTAVPLGFLSGYIKWIQKAVDSLVQFYRPIPPLAYYPLLILWLGIDD 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+       +    +A       D+   A S      +  +YII P   P 
Sbjct: 126 RSK----IMLLYLSAFAPLYIACVAAIGGIRRDYILSAKSLGANTNQILKYIIWPACQPA 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG  TA G A++  + +E+         T+G+G  + +++       + +G++IM   
Sbjct: 182 LFTGLRTAFGFAYSTLVATEM------TAATSGVGWMVMDASRYLKSDIIFMGIIIMGVT 235

Query: 566 VLALNRFLW 574
            L ++R L+
Sbjct: 236 GLVIDRCLY 244



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 22/262 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH----SLPQYASRTTL 70
           I P ++ L    +  G   ++ H       P  +      T+       SL  +   + +
Sbjct: 10  IAPAVW-LGILAVWFGYTALVKHDSVMIPSPLTVWRTFIYTVQNGYGGISLGVHLRSSFV 68

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+  A++ + +       L+   + +   +  ++   + IP L +    +++       K
Sbjct: 69  RLFLALLTAFVTAVPLGFLSGYIKWIQKAVDSLVQFYRPIPPLAYYPLLILWLGIDDRSK 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   L+A   ++ + V         ++  I RD    ++S   +  Q   Y+  P   P
Sbjct: 129 IMLLYLSAFAPLYIACV--------AAIGGIRRDYILSAKSLGANTNQILKYIIWPACQP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   +  +    +  +VA+EM           G+G  +  A +      I   ++ M  
Sbjct: 181 ALFTGLRTAFGFAYSTLVATEM------TAATSGVGWMVMDASRYLKSDIIFMGIIIMGV 234

Query: 251 VIFLYDQ---LLFRPMIVWSNK 269
              + D+    L + ++ W  K
Sbjct: 235 TGLVIDRCLYFLEKHLVFWKGK 256


>gi|49479070|ref|YP_036987.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49330626|gb|AAT61272.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 282

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   V          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 37/245 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLE 273
            F+ E
Sbjct: 275 NFKGE 279


>gi|86136259|ref|ZP_01054838.1| hypothetical taurine ABC transporter, permease protein [Roseobacter
           sp. MED193]
 gi|85827133|gb|EAQ47329.1| hypothetical taurine ABC transporter, permease protein [Roseobacter
           sp. MED193]
          Length = 273

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 86/263 (32%), Gaps = 23/263 (8%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--------- 381
           F            + +  F ++  +A     Q     +      DVL             
Sbjct: 19  FRGGGFAPASHRWIGVLVFILLVTLAELGTRQGWISPLTLPLPSDVLKTFGELYASGLLW 78

Query: 382 -LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +++ R+ V  ++ + + + VG+ IG   ++ + + P    L   P     PL V  
Sbjct: 79  AHMSVSLTRLFVGAVLGASLGVAVGVLIGLFSYVRAGLVPLTAALFPIPKIALLPLFVIW 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +       L+ FGT    +                +  SF+++     R I+LP
Sbjct: 139 FGIDEGSK----YALIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFNLSWMSIVRKIVLP 194

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  ++G   +   A    + +E+           G+GAYI E+        +  GV 
Sbjct: 195 GAMPGILSGLRISLAIAIILLVAAEMLG------AEYGIGAYILEAGSLYDLERLFAGVT 248

Query: 561 IMCCFVLAL---NRFLWHPLYLY 580
           I+    + +      +   L  +
Sbjct: 249 ILSLLGVTMSATIGLIERRLLNW 271



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 96/275 (34%), Gaps = 24/275 (8%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITL 56
                 F      P     +  ++ I ++ +   G ++         +P D++       
Sbjct: 13  QARQVAFRGGGFAPASHRWIGVLVFILLVTLAELGTRQGWISPLTLPLPSDVLKTFGELY 72

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L  + S +  R+    V+          L      +   LVP+   +  IP +  L
Sbjct: 73  ASGLLWAHMSVSLTRLFVGAVLGASLGVAVGVLIGLFSYVRAGLVPLTAALFPIPKIALL 132

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++F      K           I          + Y ++ N+ R L  + +SF LS 
Sbjct: 133 PLFVIWFGIDEGSKYA--------LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFNLSW 184

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P +MPG++  + +S++     +VA+EM+          GIG+YI  A    
Sbjct: 185 MSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEYGIGAYILEAGSLY 238

Query: 237 DLLAILYAMLTMLGVIFLY---DQLLFRPMIVWSN 268
           DL  +   +  +  +         L+ R ++ W  
Sbjct: 239 DLERLFAGVTILSLLGVTMSATIGLIERRLLNWRQ 273


>gi|83942956|ref|ZP_00955416.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. EE-36]
 gi|83845964|gb|EAP83841.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. EE-36]
          Length = 277

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 97/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI +   L   IQ       ++ +  + +      +  + +   +LSA V+ +     
Sbjct: 54  LIVIAVFGALTWAIQRNWKTPLLIMLGFLFILNQDYWEETTESLTLVLSACVVCMGVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   R+   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 IGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P+ L E +++F     Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTQLGIASTPKALLEAAQAFGAKPSQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+ + +      + L ++ V  + D++L
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNQVNTGLGFESGLIIVVVAIMLDRML 272



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L +         AI   W++   I+  F +            ++  V+   ++   
Sbjct: 50  TPHPLIVIAVFGALTWAIQRNWKTPLLIMLGFLFILNQDYWEETTESLTLVLSACVVCMG 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 110 VGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P    E A +F     +    I LP   P  +TG       + +
Sbjct: 170 ---PIRL-TQLGIASTPKALLEAAQAFGAKPSQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +        LI+    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTGLGFESGLIIVVVAIMLDRML 272


>gi|146309335|ref|YP_001189800.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145577536|gb|ABP87068.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 264

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 10/162 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G        +    Q++   P     PLV+                L+  GT + I  N 
Sbjct: 89  GLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DEAAKVFLVALGTLFPIYLNT 144

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E+A S+ ++G+  +R +ILPG  P  + G   A G  W   IV+E  S
Sbjct: 145 YHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWLTLIVAETIS 204

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                  ++G+G     + E      VVL +L+        +
Sbjct: 205 ------ASSGIGYLAMNAREFLQTDVVVLAILLYALLGKLAD 240



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 96/255 (37%), Gaps = 18/255 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  +    +         +    P  ++      L    + Q+ + +  R      I   
Sbjct: 20  LGLLAAWQLAVASGWLSSRILPAPSAVLAAGWALLASGEIWQHLAISGQRAGIGFAIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +   S+     L   + +++++P L  +   +++F           E A +F 
Sbjct: 80  IGLLLGFITGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--------EAAKVFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + N+   L E++RS+ LSG+  F  + +P ++P ++  +  ++ 
Sbjct: 132 VALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++ A+L    +  L D   + 
Sbjct: 192 FMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYALLGKLADIAARG 245

Query: 259 LFRPMIVWSNKFRLE 273
           L R  + W   ++ +
Sbjct: 246 LERVWLRWHPAYQAK 260


>gi|317484193|ref|ZP_07943122.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316924542|gb|EFV45699.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++    +   +A  + IP+G+ +G+        +P  + +   P   + PL +      
Sbjct: 74  ISIKEAFLGYFLALAVGIPLGLAMGWFRLAEGLARPIFEFIRPIPPIAWIPLTIYWFGIG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++  G     + N   G       F ++   +  T W+ +  + +P   P
Sbjct: 134 LTGK----VFIIWIGGIVPCVINSYVGVRMTNPVFLQMGRLYGATNWQLFWTVCIPSALP 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                   A    W   + +E+ +         GLG  I    + G    VVLG++ +  
Sbjct: 190 MVFGALQIALAWCWMNLVGAELLA------ANGGLGFLIQCGRKLGRPDLVVLGMVTVAM 243

Query: 565 FVLALNRFL 573
             + +   +
Sbjct: 244 TGVFIGILI 252



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 86/235 (36%), Gaps = 14/235 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++ +G++   L       V      +   + D   L ++A  +         ++L    
Sbjct: 32  LIVDMGLVPQTLLASPSAVVELFFAKLANASPDGMLLQEHAWISIKEAFLGYFLALAVGI 91

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                    R    +  PI + ++ IP + ++  T+ +F     GK        +F I+ 
Sbjct: 92  PLGLAMGWFRLAEGLARPIFEFIRPIPPIAWIPLTIYWFGIGLTGK--------VFIIWI 143

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +     + Y  +        ++ R +  + WQ FW + +P ++P +   + ++++  W
Sbjct: 144 GGIVPCVINSYVGVRMTNPVFLQMGRLYGATNWQLFWTVCIPSALPMVFGALQIALAWCW 203

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +V +E++          G+G  I    K      ++  M+T+         L+
Sbjct: 204 MNLVGAELLAANG------GLGFLIQCGRKLGRPDLVVLGMVTVAMTGVFIGILI 252


>gi|304405137|ref|ZP_07386797.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304346016|gb|EFM11850.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 266

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 28/272 (10%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI---------------VNHFTYQ 374
               L S  +      +    ++  V   + WQ +G +                +     
Sbjct: 2   RNGVLASPSKQPGKWALLGLALILPVTGLLVWQLLGDLGYLSELLFPTPYTISQSFVDLA 61

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               +     I+  RV     +   I +  GI +G    +   + P  Q++   P+    
Sbjct: 62  RSGDLWANFRISAVRVFAGFALGGGIGLAAGIAVGLSRPVEKLLDPSIQMIRMVPSLAIV 121

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +      LL+  G  + +      G     N   EVA     + W+  
Sbjct: 122 PLFILWFGIGEESK----VLLIAKGALFPVYIQTYLGIRNVDNKLFEVARVLGFSRWKRM 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  + G   + G +W   +V+E+ +       T+G+G  ++++ +    P 
Sbjct: 178 TRLVLPAATPNILLGLRLSLGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPV 231

Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
           V +G+++     L  +   R++   L  +  R
Sbjct: 232 VFVGIIVFAVAGLTTDTIVRYIEQRLLRWKDR 263



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 26/266 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQE---------TTVPRDIVDIVPITLDVHSLPQYASR 67
           P  + LL   L++ +  +L+  +              P  I            L      
Sbjct: 13  PGKWALLGLALILPVTGLLVWQLLGDLGYLSELLFPTPYTISQSFVDLARSGDLWANFRI 72

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +R+ +   +              SR +  +L P + +++ +P L  +   +++F    
Sbjct: 73  SAVRVFAGFALGGGIGLAAGIAVGLSRPVEKLLDPSIQMIRMVPSLAIVPLFILWFGIG- 131

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E + +  I    ++ +    Y  + N+   L EV+R    S W++   L +P 
Sbjct: 132 -------EESKVLLIAKGALFPVYIQTYLGIRNVDNKLFEVARVLGFSRWKRMTRLVLPA 184

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  + +S+   W  +V +E+I          GIG  ++ A +  D   +   ++ 
Sbjct: 185 ATPNILLGLRLSLGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFVGIIV 238

Query: 248 MLGVIFLYDQL---LFRPMIVWSNKF 270
                   D +   + + ++ W +++
Sbjct: 239 FAVAGLTTDTIVRYIEQRLLRWKDRY 264


>gi|329944190|ref|ZP_08292449.1| glycine betaine transport system permease protein opuAB
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530920|gb|EGF57776.1| glycine betaine transport system permease protein opuAB
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 292

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 97/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L++ +  ++    +   +         + + +    + A  T + +  A + +L+F   
Sbjct: 56  LLMVIVFALIAWMAKSWRLALGTAITFLLIISLGQ-WENAMETLVLVTIATLTALVFAIP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+++ +  ++ P+LD+MQ++P   +L  +V++F     G V G     IF++   
Sbjct: 115 LGIWAARNKYVSAIIRPVLDLMQTMPAFVYLIPSVLFFS---IGVVPGMFATLIFSMPPG 171

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++  E  RSF  + WQ    + +P ++P ++  +   +     
Sbjct: 172 -----VRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAGVNQVIMLALS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             V + M+          G+G  +  A+   D+     A L+++ +    D++
Sbjct: 227 MAVIAGMV-------GADGLGKEVVNALSTIDIAKGTEAGLSIVFLAIFLDRV 272



 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 80/232 (34%), Gaps = 13/232 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +L +  F ++  +A   +W+        F     L        T+  V +  + A +
Sbjct: 53  VPPLLMVIVFALIAWMAK--SWRLALGTAITFLLIISLGQWENAMETLVLVTIATLTALV 110

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             IP+GIW     ++S+ I+P   L+   PA V+    V   S   +       +     
Sbjct: 111 FAIPLGIWAARNKYVSAIIRPVLDLMQTMPAFVYLIPSVLFFSIGVVPGMFATLIF---- 166

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +    +     G      +  E   SF  T W+  R I LP   P  + G       A +
Sbjct: 167 SMPPGVRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAGVNQVIMLALS 226

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            ++++ +           GLG  +  +       +     L +    + L+R
Sbjct: 227 MAVIAGMVG-------ADGLGKEVVNALSTIDIAKGTEAGLSIVFLAIFLDR 271


>gi|160901050|ref|YP_001566632.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160366634|gb|ABX38247.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 351

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              ++D   +      ++  ++  I+  ++I    G+WIG+       + P  + L   P
Sbjct: 141 DVVHEDWQRLGLSTLYSLRLLLNGIVFGAVIGFLTGVWIGWSRIAGYWVHPLLRFLGPVP 200

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A+   PL      ++  +       L+   T + +     +G ++    + +VA +   +
Sbjct: 201 ASALLPLAF----FFAPSSYSAAVFLVALATFFPVAVLTWSGVASVSKSYYDVARTLGAS 256

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W     + +P   P    G     G +++  I +E+           GLG Y+  +   
Sbjct: 257 PWFLVLRVAIPAALPQVFVGLFMGLGASFSVLITAEMMG------VKAGLGWYLQWAQGW 310

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLW 574
            ++  +   +L+M      L   L+
Sbjct: 311 AAYANMYTALLVMAVLCSGLITLLF 335



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 14/207 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  D   L      +   +L+ +V   +  F+       SR  G  + P+L  +  +P  
Sbjct: 143 VHEDWQRLGLSTLYSLRLLLNGIVFGAVIGFLTGVWIGWSRIAGYWVHPLLRFLGPVPAS 202

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L     +           +  AA+F +  +  + +    +  + ++ +   +V+R+  
Sbjct: 203 ALLPLAFFF--------APSSYSAAVFLVALATFFPVAVLTWSGVASVSKSYYDVARTLG 254

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S W     + +P ++P +   + M +   +  ++ +EM+ V        G+G Y+  A 
Sbjct: 255 ASPWFLVLRVAIPAALPQVFVGLFMGLGASFSVLITAEMMGVKA------GLGWYLQWAQ 308

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLF 260
                  +  A+L M  +      LLF
Sbjct: 309 GWAAYANMYTALLVMAVLCSGLITLLF 335


>gi|23100398|ref|NP_693865.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22778631|dbj|BAC14899.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 84/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    T   +L+A++I LL         + S+    +  P+LD MQ++P   +L   
Sbjct: 87  GLWEDMMITISIILTAVIICLLIGIPIGVAMSFSKLFSTIARPVLDAMQTMPSFVYLIPA 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F            ++AIFA     +  +      ++  + +++ E + SF  S WQ 
Sbjct: 147 IFFFGLG--------NVSAIFATLIYALPPVIRLTELAIRGVDKEIIESAHSFGSSKWQT 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  +  +       VV + M+          G+G  + ++I   D+ 
Sbjct: 199 LKKVQLPQATPTIMAGVNQTTMMALSMVVIASMV-------GASGLGEQVLVSINRIDIA 251

Query: 240 AILYAMLTMLGVIFLYDQL 258
               A ++++ +  + D++
Sbjct: 252 LGFEAGISIVFLAVIIDRI 270



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 84/229 (36%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIP 403
           +W  ++  +A+G  ++S    + +  +  ++    L     IT+  ++  +II  +I IP
Sbjct: 53  WWLFIIIIIALGWYFKSAFSGILYGAFIFIIGTFGLWEDMMITISIILTAVIICLLIGIP 112

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+ + F    S+  +P    +   P+ V+    +      +++         +      
Sbjct: 113 IGVAMSFSKLFSTIARPVLDAMQTMPSFVYLIPAIFFFGLGNVS----AIFATLIYALPP 168

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++            +  E A SF  + W+  + + LP   P  + G       A +  ++
Sbjct: 169 VIRLTELAIRGVDKEIIESAHSFGSSKWQTLKKVQLPQATPTIMAGVNQTTMMALSMVVI 228

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +          +GLG  +  S  +          + +    + ++R 
Sbjct: 229 ASMVG-------ASGLGEQVLVSINRIDIALGFEAGISIVFLAVIIDRI 270


>gi|121603491|ref|YP_980820.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120592460|gb|ABM35899.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 272

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 13/246 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +++++  +    +  V   +     G                   ++++R +    + ++
Sbjct: 32  IAFVIVWYAVTALELVNTKLIVPPAGVAAQGLKELANGSFYLGIGLSLWRDLSGFTLGAL 91

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             I VG  IG        I P            + PL+ + V    L+      + + F 
Sbjct: 92  AGIAVGALIGVSHLADKVIGPTFHTARQISLFAWLPLLSALVGTGELSK----IIFISFS 147

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + ++   + G         EVA  +  T  + +  +ILP   P  + G       AW 
Sbjct: 148 AFYPVVLGTLEGVRGVSRAHAEVARVYGFTPAQVFFRLILPAASPEILAGLRLGLIYAWL 207

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           A+I +E            G+G  + +     +   ++ G+L +       NR        
Sbjct: 208 ATIGAEYLLVNDGQ----GIGNIVFKGRMAFNVELILFGLLAIGLVGNVFNRI-----AA 258

Query: 580 YGTRCL 585
              R L
Sbjct: 259 VAERRL 264



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 16/248 (6%)

Query: 23  LAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AFV+V   +  + L   +    P  +       L   S       +  R LS   +  L
Sbjct: 32  IAFVIVWYAVTALELVNTKLIVPPAGVAAQGLKELANGSFYLGIGLSLWRDLSGFTLGAL 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   S     V+ P     + I +  +L                  EL+ I  
Sbjct: 92  AGIAVGALIGVSHLADKVIGPTFHTARQISLFAWLPLLSALVGTG--------ELSKIIF 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + +     + +  + R   EV+R +  +  Q F+ L +P + P ++  + + + 
Sbjct: 144 ISFSAFYPVVLGTLEGVRGVSRAHAEVARVYGFTPAQVFFRLILPAASPEILAGLRLGLI 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
             W   + +E ++V D      GIG+ +       ++  IL+ +L +  V  +++++   
Sbjct: 204 YAWLATIGAEYLLVNDGQ----GIGNIVFKGRMAFNVELILFGLLAIGLVGNVFNRIAAV 259

Query: 261 --RPMIVW 266
             R ++ W
Sbjct: 260 AERRLLRW 267


>gi|150018162|ref|YP_001310416.1| taurine ABC transporter permease [Clostridium beijerinckii NCIMB
           8052]
 gi|149904627|gb|ABR35460.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 269

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 87/214 (40%), Gaps = 12/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ+   +V      +   ++    ++M R+ + I  A II +P+G+  G    + + + 
Sbjct: 55  VWQAFVELVKQGYKGE--SLVSHIAVSMERLFIAIFFAIIIGVPLGLIAGSSRTVRAILD 112

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF +     P   ++ L+V        +      +L+       +L  VI      P D 
Sbjct: 113 PFIEFYRPLPPLAYYTLIVLWFGIGDESK----IILLFLNAFAPLLIGVIFSVQKVPLDR 168

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A S   +G   +  +I     P  +T   TA G A+   + +E+ +        +G+
Sbjct: 169 INGAKSLGASGINLFISVIFRSCLPDILTSLRTAIGVAYATLVAAEMVA------AVSGI 222

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  + ++++      V +GV+IM    + L+ F+
Sbjct: 223 GWMVLDASKYLRNDIVYVGVIIMGIIAIILDSFV 256



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 87/213 (40%), Gaps = 17/213 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  + + +  R+  A+  +++       +A  SR +  +L P ++  + +P L + T  
Sbjct: 71  SLVSHIAVSMERLFIAIFFAIIIGVPLGLIAGSSRTVRAILDPFIEFYRPLPPLAYYTLI 130

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F           + + I  +F +    +   +  S+  +P D    ++S   SG   
Sbjct: 131 VLWFGIG--------DESKIILLFLNAFAPLLIGVIFSVQKVPLDRINGAKSLGASGINL 182

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  +     +P ++ ++  ++   +  +VA+EM+        + GIG  +  A K     
Sbjct: 183 FISVIFRSCLPDILTSLRTAIGVAYATLVAAEMVA------AVSGIGWMVLDASKYLRND 236

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            +   ++ M  +  + D   + L R    W  K
Sbjct: 237 IVYVGVIIMGIIAIILDSFVRFLIRKASPWLEK 269


>gi|257865474|ref|ZP_05645127.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257871810|ref|ZP_05651463.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC10]
 gi|257799408|gb|EEV28460.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257805974|gb|EEV34796.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC10]
          Length = 244

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 10/201 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +     ++     ++ RV   +  A ++ +P+GI IG    +  ++ P    L   
Sbjct: 37  AERFWALREVLLIHTGASLLRVFAALSGALLVGVPLGILIGRSQRVDRRLGPLLYFLYPI 96

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F P+ +      +L+      LL+       ++ ++    +  P  + +V  ++  
Sbjct: 97  PKVAFLPVFMIFFGLGNLSK----ILLIFAVIVIQVIVSIRDAVTKIPPAYFQVMKNYTN 152

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                 R++ILP + P        + G A  +   +E       +  T G+G  I  +  
Sbjct: 153 QWRHVLRFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWS 206

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           K  +P+++ G+L++      L
Sbjct: 207 KMDYPQMLSGILLIALMGYLL 227



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   + LR+ +A+  +LL       L  +S+R+   L P+L  +  IP + FL   +
Sbjct: 47  LLIHTGASLLRVFAALSGALLVGVPLGILIGRSQRVDRRLGPLLYFLYPIPKVAFLPVFM 106

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F            L+ I  IF   V  +  S+  ++  IP    +V +++        
Sbjct: 107 IFFGLG--------NLSKILLIFAVIVIQVIVSIRDAVTKIPPAYFQVMKNYTNQWRHVL 158

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P  MP L  ++ +S+      +  +E            G+G  I  A  + D   
Sbjct: 159 RFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWSKMDYPQ 212

Query: 241 ILYAMLTMLGVIFLY 255
           +L  +L +  + +L 
Sbjct: 213 MLSGILLIALMGYLL 227


>gi|254486656|ref|ZP_05099861.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101]
 gi|214043525|gb|EEB84163.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101]
          Length = 277

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + +   +LSA V+ +         AA   RL   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEETTESLTLVLSACVVCMGVGVPIGIAAAHRPRLYRYMAPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF +               + + P+ L E +++F     Q  W
Sbjct: 150 FFG---IGMVPGLIATVIFVLPAP-----IRLTQLGIASTPKSLLEAAQAFGAKPSQTLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++          G+G  +  A+ + +    
Sbjct: 202 KIELPYALPQIMAGLNQTIMLSLSMVVIAALV-------GADGLGVPVVRALNQVNTGLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             + L ++ V  + D++L
Sbjct: 255 FESGLIIVVVAIMLDRML 272



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             +   I         A+   W++  ++V  F +            ++  V+   ++   
Sbjct: 50  TPHPFYIIAVFAAFTWALQRNWKTPVFVVLGFLFILNQDYWEETTESLTLVLSACVVCMG 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 110 VGVPIGIAAAHRPRLYRYMAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P    E A +F     +    I LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGIASTPKSLLEAAQAFGAKPSQTLWKIELPYALPQIMAGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +        LI+    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTGLGFESGLIIVVVAIMLDRML 272


>gi|229542731|ref|ZP_04431791.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229327151|gb|EEN92826.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 252

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 15/222 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  +   +       +      +  R ++  ++   I   +G++ G      S +    Q
Sbjct: 37  VAVVKAAWGLTQSGQLFNYIGASTKRALIGFLVGGGIGFGLGLFTGLSKKAESLLDSTVQ 96

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++   P     P+V+                L+  GT + I  N   G  +      E+ 
Sbjct: 97  MIRNVPHLALIPIVILWFGIG----EEAKLFLVALGTFFPIYLNTFHGIRSVDRALIEMG 152

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + + G   + ++ILPG  P  + G   A G  W   IV+E  +        +G+G   
Sbjct: 153 EVYGLKGTALFWHMILPGALPSILVGVRYALGVTWVTLIVAETIA------SNSGIGYMA 206

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             + E      VVL +++        +   W  L     + L
Sbjct: 207 MNAREFMQLDVVVLSIVLYALLGKLSD---W--LAKIAEQRL 243



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V           L  Y   +T R L   ++     F        S++   +L 
Sbjct: 33  LPSPVAVVKAAWGLTQSGQLFNYIGASTKRALIGFLVGGGIGFGLGLFTGLSKKAESLLD 92

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A +F +     + +  + +  + ++
Sbjct: 93  STVQMIRNVPHLALIPIVILWFGIG--------EEAKLFLVALGTFFPIYLNTFHGIRSV 144

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E+   + L G   FW++ +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 145 DRALIEMGEVYGLKGTALFWHMILPGALPSILVGVRYALGVTWVTLIVAETIASNS---- 200

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +   L  ++ +++    +  L D L     + ++ W   ++
Sbjct: 201 --GIGYMAMNAREFMQLDVVVLSIVLYALLGKLSDWLAKIAEQRLLKWHPSYQ 251


>gi|295676387|ref|YP_003604911.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295436230|gb|ADG15400.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 282

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
             +  ++     P SN      R  G     +      L + +  +    +     V   
Sbjct: 4   TALSAATGATPQPASNARAAALRRFGAHLVPWLAPVAILLAWEIAARSGAL--STRVLPE 61

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
              +   +   I +   + DV        ++ +R V    I   I + +G+  G      
Sbjct: 62  PFAVVKAAWSLIQSGEMWADVK-------VSTWRAVSGFAIGGGIGLVLGLATGLFKPAE 114

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             +    Q++   PA    PLV+                L+  G  + +  N   G  + 
Sbjct: 115 IVLDSTVQMIRNIPALAMIPLVILWFGIE----EQAKVFLVALGVFFPVYVNTFHGIRSV 170

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E+A S+ + G+  +R++ILPG  P  + G   A G  W   IV+E  S       
Sbjct: 171 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 224

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +G+G     + E      VV+G+L+        +  
Sbjct: 225 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADML 261



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 17/239 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      +    +      +T R +S   I      V        + 
Sbjct: 53  ALSTRVLPEPFAVVKAAWSLIQSGEMWADVKVSTWRAVSGFAIGGGIGLVLGLATGLFKP 112

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             +VL   + ++++IP L  +   +++F           E A +F +     + +  + +
Sbjct: 113 AEIVLDSTVQMIRNIPALAMIPLVILWFGIE--------EQAKVFLVALGVFFPVYVNTF 164

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++  +L E++RS+ + G+  + ++ +P ++P ++  +  +    W  ++ +E I  
Sbjct: 165 HGIRSVDANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS- 223

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
                   GIG     A +      ++  +L    +  L D L   L R  + W   ++
Sbjct: 224 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKSLERLSLRWHPAYQ 277


>gi|227832443|ref|YP_002834150.1| glycine betaine ABC transporter, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183694|ref|ZP_06043115.1| glycine betaine ABC transporter, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453459|gb|ACP32212.1| glycine betaine ABC transporter, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 290

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           LL+   +I ++ + L G    +    +   +   L +          T   +L A + + 
Sbjct: 48  LLSVPGMIMLVILALLGWFFRSPKFAVGSALGFLLVMCMRQWDTMLETMSLVLIATLSAT 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        AAKS     ++ PI+D MQ++P   +L   V +F     G V G     IF
Sbjct: 108 ILAVPLGIWAAKSNTASAIIRPIMDFMQTMPAFVYLIPAVTFFS---IGVVPGIFSTIIF 164

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+               +  +  +  E  +S+  + WQ    + +P ++P ++  +   +
Sbjct: 165 ALPPG-----VRMTELGIRQVDSETVEAGKSYGATNWQILKGIQLPLAVPTIMAGINQVI 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  V + M+          G+G  +  AI   D+   + A L ++ +    D+L
Sbjct: 220 MLSLSMAVIAGMV-------GADGLGKEVVSAISTLDIAKGVEAGLAVVILAVFLDRL 270



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 11/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              TM  V++  + A+I+ +P+GIW       S+ I+P    +   PA V+    V+  S
Sbjct: 92  MLETMSLVLIATLSATILAVPLGIWAAKSNTASAIIRPIMDFMQTMPAFVYLIPAVTFFS 151

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +       +          +     G     ++  E   S+  T W+  + I LP  
Sbjct: 152 IGVVPGIFSTIIF----ALPPGVRMTELGIRQVDSETVEAGKSYGATNWQILKGIQLPLA 207

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G       + + ++++ +           GLG  +  +       + V   L +
Sbjct: 208 VPTIMAGINQVIMLSLSMAVIAGMVG-------ADGLGKEVVSAISTLDIAKGVEAGLAV 260

Query: 563 CCFVLALNRF 572
               + L+R 
Sbjct: 261 VILAVFLDRL 270


>gi|206974045|ref|ZP_03234963.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus H3081.97]
 gi|229139551|ref|ZP_04268122.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-ST26]
 gi|229197097|ref|ZP_04323834.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus m1293]
 gi|206748201|gb|EDZ59590.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus H3081.97]
 gi|228586407|gb|EEK44488.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus m1293]
 gi|228644098|gb|EEL00359.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus BDRD-ST26]
          Length = 282

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 37/245 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLE 273
            F+ E
Sbjct: 275 NFKGE 279


>gi|158424268|ref|YP_001525560.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331157|dbj|BAF88642.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 291

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 94/240 (39%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++    V     + L          + +  +   +    LP  A  +   +L    + +L
Sbjct: 48  IVVLAAVWQAYGVYLDNPLLFPSLTETLQALAENVRSGVLPARAWASLQVLLMGYAVGVL 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +A  +R     L  +  ++  +P +  L   +++F             + +F 
Sbjct: 108 LAGILTIVAINTRIGSDFLETVTAMLSPLPAIALLPLALIWFGLGNG--------SLVFI 159

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     + + L  V R++ L G+     + +P + P ++  + +  +
Sbjct: 160 LVHSVLWPVALNTHSGFRAVSQTLRMVGRNYGLKGFAYIRKILIPAAFPSILTGLKIGWA 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  +VA+E++          G+G +I       ++ A+   +LT++ +  + + ++FR
Sbjct: 220 FAWRTLVAAELVF--GVSSGQGGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENVIFR 277



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 25/267 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFC-----VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           P         +R   +L+  W       V+  V +   WQ+ G  +++      L     
Sbjct: 17  PPAGAAGAEVERRIGVLEAAWDIGAVRKVLIIVVLAAVWQAYGVYLDNPLLFPSLTETLQ 76

Query: 383 GCI--------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                            ++  +++   +  ++   + I        S  ++    +L+  
Sbjct: 77  ALAENVRSGVLPARAWASLQVLLMGYAVGVLLAGILTIVAINTRIGSDFLETVTAMLSPL 136

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PL +      + +    L  +++    W +  N  +G  A     + V  ++ +
Sbjct: 137 PAIALLPLALIWFGLGNGS----LVFILVHSVLWPVALNTHSGFRAVSQTLRMVGRNYGL 192

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G+ + R I++P  FP  +TG       AW   + +E+     +     GLG +I E+  
Sbjct: 193 KGFAYIRKILIPAAFPSILTGLKIGWAFAWRTLVAAELVFG--VSSGQGGLGWFIFENRN 250

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
               P V  G+L +    L +   ++ 
Sbjct: 251 LLEIPAVFAGLLTVILIGLVVENVIFR 277


>gi|126174513|ref|YP_001050662.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS155]
 gi|153000552|ref|YP_001366233.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS185]
 gi|217973482|ref|YP_002358233.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS223]
 gi|304408624|ref|ZP_07390245.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS183]
 gi|307305453|ref|ZP_07585201.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica BA175]
 gi|125997718|gb|ABN61793.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS155]
 gi|151365170|gb|ABS08170.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS185]
 gi|217498617|gb|ACK46810.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS223]
 gi|304352445|gb|EFM16842.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica OS183]
 gi|306911756|gb|EFN42181.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella baltica BA175]
          Length = 283

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LVI +   +   +    +      +  + + +         T   + S++V   L    
Sbjct: 54  LLVIALFGAIAWRVSGLKLAI-FTLLSLVLIGLLGFWSETMITLAMVFSSVVFCTLVGVP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   A +S R+  VL PILD MQ+ P   +L   V+ F             A + A    
Sbjct: 113 FGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLFSIGNT--------AGVLATIIF 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  +L E + +F  +  Q    + +P ++P ++  +  ++     
Sbjct: 165 ALPPLVRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G+ + L +   D+       L ++ +  + D++
Sbjct: 225 MVVIAAMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            +V  +   IAW+  G  +  FT   ++ +  LG      IT+  V   ++  +++ +P 
Sbjct: 54  LLVIALFGAIAWRVSGLKLAIFTLLSLVLIGLLGFWSETMITLAMVFSSVVFCTLVGVPF 113

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW G    +++ ++P    +   PA V+   +V   S  +    L   +         +
Sbjct: 114 GIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLFSIGNTAGVLATIIF----ALPPL 169

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + +P   P  + G       + +  +++
Sbjct: 170 VRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLSMVVIA 229

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLGA +             +G L +    + L+R 
Sbjct: 230 AMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270


>gi|19746081|ref|NP_607217.1| ABC transporter [Streptococcus pyogenes MGAS8232]
 gi|19748252|gb|AAL97716.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS8232]
          Length = 508

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  +   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGVDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 13/195 (6%)

Query: 381 WLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           WL  +   +   ++ ++IA +I +P+   +      S  +     +    P+     L +
Sbjct: 15  WLAALGEHLQISLLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI 74

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L     L +  IF     IL N I G +       E  ++F +T W   +   
Sbjct: 75  PLMGIGTLPAVTALVIYAIF----PILQNTITGLNGVDPSLVEAGTAFGMTKWERLKTFE 130

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++G  T+       + ++ +   G       GLG++I    ++ +   +++G
Sbjct: 131 IPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIG 183

Query: 559 VLIMCCFVLALNRFL 573
            +      +  N  L
Sbjct: 184 AISSALLAIIFNSLL 198


>gi|85704860|ref|ZP_01035961.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670678|gb|EAQ25538.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 350

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 81/194 (41%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +T   +     + +LF        ++S  +  + +P+LD++Q++P   +L   +  F 
Sbjct: 154 AMQTMSIIFVCAFLCVLFGVPIGIAMSRSDTMQRLSIPVLDMLQTLPTFVYLIPLIFLFS 213

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P            AI    +  +       +  + +D+ E + +F ++  QK   + 
Sbjct: 214 VTEPKLYG-------IAIILYAIVPVIRLTDLGIRLVDKDVIEAAEAFGMTRHQKLLRVQ 266

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  ++      VV + ++         PG+G  +   I+  +L   L A
Sbjct: 267 IPLALPNIMAGVNQTIMMSLAMVVIASLVS-------APGLGVLVLRGIRNLELGVGLMA 319

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 320 GLGIVLLAIILDRV 333



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 74/232 (31%), Gaps = 10/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+    +    +        +W  + ++V    +   +    +   TM  + V   +  +
Sbjct: 111 VTPWWIVLPLLMALVWVASRSWALMSFVVGALLFLLFIDHYTVAMQTMSIIFVCAFLCVL 170

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +P+GI +     +     P   +L   P  V+    +  +  + +       + +I  
Sbjct: 171 FGVPIGIAMSRSDTMQRLSIPVLDMLQTLPTFVYL---IPLIFLFSVTEPKLYGIAIILY 227

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G      D  E A +F +T  +    + +P   P  + G       +  
Sbjct: 228 AIVPVIRLTDLGIRLVDKDVIEAAEAFGMTRHQKLLRVQIPLALPNIMAGVNQTIMMSLA 287

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ + S         GLG  +            ++  L +    + L+R
Sbjct: 288 MVVIASLVS-------APGLGVLVLRGIRNLELGVGLMAGLGIVLLAIILDR 332


>gi|83954131|ref|ZP_00962851.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
 gi|83841168|gb|EAP80338.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
          Length = 277

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 97/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI +   L   IQ       ++ +  + +      +  + +   +LSA V+ +     
Sbjct: 54  LIVIAVFGALTWAIQRNWKTPLLIVLGFLFILNQDYWEETTESLTLVLSACVVCMGVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   R+   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 114 IGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P+ L E +++F     Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTQLGIASTPKALLEAAQAFGAKPSQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+ + +      + L ++ V  + D++L
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNQVNTGLGFESGLIIVVVAIMLDRML 272



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L +         AI   W++   IV  F +            ++  V+   ++   
Sbjct: 50  TPHPLIVIAVFGALTWAIQRNWKTPLLIVLGFLFILNQDYWEETTESLTLVLSACVVCMG 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI    RP +   + P   L+   P  V+    +       +   +   + ++  
Sbjct: 110 VGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G ++ P    E A +F     +    I LP   P  +TG       + +
Sbjct: 170 ---PIRL-TQLGIASTPKALLEAAQAFGAKPSQTLWKIELPYALPQIMTGLNQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +  +  + +        LI+    + L+R L
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNQVNTGLGFESGLIIVVVAIMLDRML 272


>gi|167042347|gb|ABZ07075.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine crenarchaeote
           HF4000_ANIW97M7]
          Length = 252

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+V+ +   +   SL      + LR++  + I++    V     A+   +   +  
Sbjct: 35  PSPVDVVEDLAYGVADASLFYGIGTSILRLIIGLTIAIAGGLVLGIFMARVETVNQTIGS 94

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  +QSIP + ++   +++F     G         IF +    ++ +T + Y  + NI 
Sbjct: 95  LVLGLQSIPSIAWVPLAILWFGLTDTG--------IIFVVVIGAIFAVTINTYTGVKNIN 146

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E +R+      Q    + +P + P ++       +  W  V+ +E++         
Sbjct: 147 PSYIEAARNMGAKEGQLITSILIPAAFPFIISGFKQGWAFAWRGVIGAELL------FSF 200

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  + +  +  D+  ++  M+ ++G+  L D ++F+
Sbjct: 201 LGLGFLLNVGRQLNDVSQVIAIMIVIMGIGILVDGVVFK 239



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 76/200 (38%), Gaps = 10/200 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            + +    ++ R+++ + IA    + +GI++     ++  I      L + P+  + PL 
Sbjct: 52  SLFYGIGTSILRLIIGLTIAIAGGLVLGIFMARVETVNQTIGSLVLGLQSIPSIAWVPLA 111

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +  +++ G  + +  N   G       + E A +      +    I
Sbjct: 112 ILWFGLTDTG----IIFVVVIGAIFAVTINTYTGVKNINPSYIEAARNMGAKEGQLITSI 167

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P  FP+ ++G       AW   I +E+           GLG  +    +     +V+ 
Sbjct: 168 LIPAAFPFIISGFKQGWAFAWRGVIGAELL------FSFLGLGFLLNVGRQLNDVSQVIA 221

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            ++++    + ++  ++  +
Sbjct: 222 IMIVIMGIGILVDGVVFKKI 241


>gi|313888726|ref|ZP_07822390.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845284|gb|EFR32681.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 254

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 10/213 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +       +V          +     I++ RV     IA I+           P  S  
Sbjct: 30  YVLPSPGRVLVTGREMFLDGSIFRDILISLKRVFTGFTIAFILASYFASLFLIYPKTSIY 89

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +   + L   P     P+++  +           +++++  + + +  N+  G      
Sbjct: 90  FEGIFEFLKNVPPLSLVPILILWIGIGEGTK----TVIIVLASFFPLFLNIQKGFMVVDP 145

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           D  EV   F    +  +  I +P        G   A G +W + I +E+ +       ++
Sbjct: 146 DLLEVGDVFSYNKFEKFIKISIPCALKDIFVGMRIALGYSWRSIIAAEMIA------ASS 199

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           GLG  I  + +      V++G++++ C     +
Sbjct: 200 GLGYMINFARQMSRIDRVIVGIIMIGCIGYLTD 232



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 91/230 (39%), Gaps = 14/230 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            +  + +        P  ++          S+ +    +  R+ +   I+ +    +A+L
Sbjct: 20  ALSMMNIWSEYVLPSPGRVLVTGREMFLDGSIFRDILISLKRVFTGFTIAFILASYFASL 79

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
                +  +    I + ++++P L  +   +++       K +   LA+ F +F      
Sbjct: 80  FLIYPKTSIYFEGIFEFLKNVPPLSLVPILILWIGIGEGTKTVIIVLASFFPLF------ 133

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              ++ +    +  DL EV   F  + ++KF  + +P ++  +   M +++   W  ++A
Sbjct: 134 --LNIQKGFMVVDPDLLEVGDVFSYNKFEKFIKISIPCALKDIFVGMRIALGYSWRSIIA 191

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +EMI          G+G  I  A +   +  ++  ++ +  + +L D + 
Sbjct: 192 AEMIAASS------GLGYMINFARQMSRIDRVIVGIIMIGCIGYLTDFIF 235


>gi|297158151|gb|ADI07863.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 682

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 82/575 (14%), Positives = 163/575 (28%), Gaps = 55/575 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVI 78
           +    L    +      +        +     ++     L        +T   M  A+ +
Sbjct: 125 VTLLALGWAGVTAAATLLAWRVAGVRVAVTAAVSFAACGLLGMWVPTMQTLALMAVAVAV 184

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S+    +       S R    L P+LD MQ +P   +L   V+ F    PG        A
Sbjct: 185 SVAIGMLLGLAGGLSERTYRALRPVLDTMQVLPAFAYLLPVVLVFGIGVPG--------A 236

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A        M       L      + E   S   +G Q+     +P +   L+  +  
Sbjct: 237 VLATVIYAAPPMARLTALGLRGADAGVMEAVASLGATGRQRLLSARLPLARRELLLGLNQ 296

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++       V + +I          G+G  +  A+   D+   L A + ++ +  + D  
Sbjct: 297 TIMMALSMAVIASVIGGA-------GLGDRVYQALSAVDVGKALAAGIPIVLLAVVLD-- 347

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT-------------------NFLRFIG 299
             R       +  ++R TG      W  +                         +   I 
Sbjct: 348 --RTTAAAGLRLGMDRDTGPRWLRGWYAWAGVAAGTAAVALAGRAAGSAGWPDGWTLAIA 405

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
                    + +++      +G            +    R +     +W  ++   A+  
Sbjct: 406 EPVNTAKEWMVDHLYSGVPVVGGTADWASGYVTYVLDPLRGALQGLPWWSLLLIVAALAW 465

Query: 360 A---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
               W +    V       VL V      T+ +V+  + +  ++    GI     P +  
Sbjct: 466 LIGTWGTALTAVLALAAIGVLGVWDPAMDTLSQVLAAVAVTLVLGFATGIAAARSPRLER 525

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P   +    P  V+   VV+              +  +      ++     G     
Sbjct: 526 LLRPVLDICQTMPQFVYLIPVVALFGVGRAPAAAAAIVYALPA----VIRITTQGLRNVD 581

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A S   T  +  R + LP   P  +              I+  +   G      
Sbjct: 582 PAALESARSLGATRGQQLRQVQLPLARPALLLAVNQGVVLVLAVVIIGGLVGSGA----- 636

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             LG  +     +G     ++    + C  L L+R
Sbjct: 637 --LGYDVVFGLAQGDLATGLVAGAAIVCLGLMLDR 669



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + +I   L  +  T        +    + V  +   A  T  ++L+A+ ++L+  F    
Sbjct: 456 LLLIVAALAWLIGTWGTALTAVLALAAIGVLGVWDPAMDTLSQVLAAVAVTLVLGFATGI 515

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA+S RL  +L P+LDI Q++P   +L   V  F          A + A+ A+      
Sbjct: 516 AAARSPRLERLLRPVLDICQTMPQFVYLIPVVALFGVGRAPAAAAAIVYALPAVIRI--- 572

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
                  Q L N+     E +RS   +  Q+   + +P + P L+  +   +      V+
Sbjct: 573 -----TTQGLRNVDPAALESARSLGATRGQQLRQVQLPLARPALLLAVNQGVVLVLAVVI 627

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              ++  G        +G  +   + + DL   L A   ++ +  + D++
Sbjct: 628 IGGLVGSGA-------LGYDVVFGLAQGDLATGLVAGAAIVCLGLMLDRV 670


>gi|221064974|ref|ZP_03541079.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220709997|gb|EED65365.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 282

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ + + +        L  +A+ +  R+L   V   L   +  TL   SR +   L+
Sbjct: 57  LPSPQFVWETLAELATNGELWTHAAASLQRVLVGFVAGSLLGLLLGTLMGLSRSVEAYLL 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG++ F ++      P K I         I  + +  +T +  Q     
Sbjct: 117 PSFNALVQIPVLGWMPFVLLLVGIGEPLKYI--------LIAKAALVPVTLATLQGFRQA 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L EV   +  +  Q+   + +P ++P L   + +  +  W  +V  E++   +    
Sbjct: 169 PQNLLEVGCVYGYTRRQQVLEIVLPTALPTLFTGLRLGFTKAWLSLVVVELVASSE---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ A++ +  + +L D+LL
Sbjct: 225 --GLGYLIVYGRQLFQLDLVMAAVIIVGALGYLIDRLL 260



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV+V  +  S++ + +G  +G    + + + P    L   P   + P V+  V 
Sbjct: 80  AAASLQRVLVGFVAGSLLGLLLGTLMGLSRSVEAYLLPSFNALVQIPVLGWMPFVLLLVG 139

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      +L+       +    + G    P +  EV   +  T  +    I+LP  
Sbjct: 140 IG----EPLKYILIAKAALVPVTLATLQGFRQAPQNLLEVGCVYGYTRRQQVLEIVLPTA 195

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG       AW + +V E+ +       + GLG  I    +      V+  V+I+
Sbjct: 196 LPTLFTGLRLGFTKAWLSLVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAVIIV 249

Query: 563 CCFVLALNRFL 573
                 ++R L
Sbjct: 250 GALGYLIDRLL 260


>gi|15594490|ref|NP_212279.1| glycine betaine, L-proline ABC transporter, permease protein (proW)
           [Borrelia burgdorferi B31]
 gi|195941879|ref|ZP_03087261.1| glycine betaine, L-proline ABC transporter, permease protein (proW)
           [Borrelia burgdorferi 80a]
 gi|216264569|ref|ZP_03436561.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 156a]
 gi|218249326|ref|YP_002374673.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi ZS7]
 gi|221217387|ref|ZP_03588858.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 72a]
 gi|223889111|ref|ZP_03623700.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 64b]
 gi|224532803|ref|ZP_03673419.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi WI91-23]
 gi|224533988|ref|ZP_03674572.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi CA-11.2a]
 gi|225549279|ref|ZP_03770252.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 94a]
 gi|225549879|ref|ZP_03770841.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 118a]
 gi|226320663|ref|ZP_03796221.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 29805]
 gi|226321944|ref|ZP_03797469.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi Bol26]
 gi|2688023|gb|AAC66524.1| glycine betaine, L-proline ABC transporter, permease protein (proW)
           [Borrelia burgdorferi B31]
 gi|215981042|gb|EEC21849.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 156a]
 gi|218164514|gb|ACK74575.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi ZS7]
 gi|221192665|gb|EEE18881.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 72a]
 gi|223885360|gb|EEF56461.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 64b]
 gi|224512291|gb|EEF82676.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi WI91-23]
 gi|224512824|gb|EEF83191.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi CA-11.2a]
 gi|225369570|gb|EEG99021.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 118a]
 gi|225370137|gb|EEG99577.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 94a]
 gi|226232534|gb|EEH31288.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi Bol26]
 gi|226233879|gb|EEH32602.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi 29805]
 gi|312148554|gb|ADQ31213.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi JD1]
 gi|312149658|gb|ADQ29729.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia burgdorferi N40]
          Length = 299

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++++S++       L     R  + L PILD+MQ++P   +L   
Sbjct: 83  NLWEASMDTIAIIFVSVLVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +  ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TASAIFATIVFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +  
Sbjct: 195 LFQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVIIAIILDRIMQSIFIKFS 275



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 91/229 (39%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           + +   VC ++     + + +++    +  + + +W   + T+  + V ++++ I+ IP+
Sbjct: 50  LLFILTVCLLSFVFLKKRLIFLILPGFFFILYFNLWEASMDTIAIIFVSVLVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIVF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILFQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIM 267


>gi|317484328|ref|ZP_07943249.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316924406|gb|EFV45571.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 214

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 10/197 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV    ++A I  + +G+  G  P ++S + P    + A P   + PL +  +   
Sbjct: 22  ASLGRVGSGYLLAVIPGVALGLASGRSPALASLLSPIINGVRAVPGISWLPLALLWLGIG 81

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+     +    N  AGA++ P                 +  +++P   P
Sbjct: 82  FR----ATVFLIALAGFFPAYLNAAAGAASVPPVLIRAGRMLGFGRRAIFFRVVIPSAMP 137

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A G +++  ++ E+           GLGA I ++   G    +V G++++  
Sbjct: 138 QVRTGLRVALGMSFSYLVLGELTGVPD------GLGAMIMDARLAGRVDLLVSGIILIAL 191

Query: 565 FVLALNRFLWHPLYLYG 581
                +  L   L    
Sbjct: 192 VGWLCDVLLMRALSAVS 208



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 85/204 (41%), Gaps = 14/204 (6%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
               S +  R+ S  +++++        + +S  L  +L PI++ ++++P + +L   ++
Sbjct: 17  WGDLSASLGRVGSGYLLAVIPGVALGLASGRSPALASLLSPIINGVRAVPGISWLPLALL 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +         A +F I  +  +    +      ++P  L    R         F+
Sbjct: 77  WLGIGFR--------ATVFLIALAGFFPAYLNAAAGAASVPPVLIRAGRMLGFGRRAIFF 128

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP +   + +++   + ++V  E+  V D      G+G+ I  A     +  +
Sbjct: 129 RVVIPSAMPQVRTGLRVALGMSFSYLVLGELTGVPD------GLGAMIMDARLAGRVDLL 182

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIV 265
           +  ++ +  V +L D LL R +  
Sbjct: 183 VSGIILIALVGWLCDVLLMRALSA 206


>gi|28210129|ref|NP_781073.1| glycine/betaine transport system permease protein [Clostridium
           tetani E88]
 gi|28202565|gb|AAO35010.1| glycine/betaine transport system permease protein [Clostridium
           tetani E88]
          Length = 512

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +     +       A+++++        L ++ ++    ++ I +I+Q++P L  L F
Sbjct: 12  SEILSLTGKHLQLTAIAVLLAIFIGVPIGILISRYKKAAPYVIGIANIVQAVPSLALLGF 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              E+ +I  +F   +  +  + Y SL NI  D++E  ++  ++ +Q
Sbjct: 72  LIPIIGIG--------EMPSILMVFLYSLLPIIKNTYTSLENISPDIKEAGKAMGMTNYQ 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P ++  + +S       V A  ++ +    +   G+G  I   I+  + 
Sbjct: 124 LLTMVELPLAFPIIMAGVRIS------SVTAVGLMTIA-AYVGAGGLGDLIFAGIQSLNS 176

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   +    +  L D ++ +
Sbjct: 177 SMILSGAIPACIMALLLDFIIGK 199



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 11/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    +    + +++A  I +P+GI I      +  +   A ++ A P+      +
Sbjct: 13  EILSLTGKHLQLTAIAVLLAIFIGVPIGILISRYKKAAPYVIGIANIVQAVPSLALLGFL 72

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +       L++   +   I+ N          D KE   +  +T ++    +
Sbjct: 73  IPIIGIGEM----PSILMVFLYSLLPIIKNTYTSLENISPDIKEAGKAMGMTNYQLLTMV 128

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP  FP  + G   +   A     ++     G       GLG  I    +  +   ++ 
Sbjct: 129 ELPLAFPIIMAGVRISSVTAVGLMTIAAYVGAG-------GLGDLIFAGIQSLNSSMILS 181

Query: 558 GVLIMCCFVLALN 570
           G +  C   L L+
Sbjct: 182 GAIPACIMALLLD 194


>gi|323174961|gb|EFZ60576.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli LT-68]
          Length = 263

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 90/256 (35%), Gaps = 31/256 (12%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLG----------CITMFRVVVLII 395
           WF  V  VA+     S+G++      + + V+   W             I+ +R ++   
Sbjct: 15  WFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFS 74

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   + + +G+  G        +    Q+L   P     PLV+                L
Sbjct: 75  IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESAKIFL 130

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G   A G
Sbjct: 131 VALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALG 190

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LA 568
             W   IV+E  S        +G+G     + E      VV+ +++              
Sbjct: 191 LMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQL 244

Query: 569 LNRFL--WHPLYLYGT 582
           L R    W+P Y    
Sbjct: 245 LERLWLRWNPAYHLKE 260


>gi|323947277|gb|EGB43285.1| inner membrane transport system [Escherichia coli H120]
          Length = 263

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +            L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVGTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           RV+          V  +A  + W S   + +        + +           I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVGTAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|170745431|ref|YP_001766888.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170659032|gb|ACB28086.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 262

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 13/204 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV +  +  +++   +G+  G  P I +     ++L+   P     PL +     
Sbjct: 69  LASLRRVGIAFVGGAVLGTGIGLLRGRVPEIDALFLVPSELVRPIPPLGLIPLFILWFGI 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L + L +        + N  AGA A   D    A S   + W+ +R+++LP   
Sbjct: 129 GETSKILLIFLSVFLIA----MVNAQAGAGACGLDTLRAARSMGASRWQAFRFVVLPSAL 184

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A    + +E+           GLG  I +++       V  G++++ 
Sbjct: 185 PQIMTGLRVAMGTALTILVAAELLGGD------RGLGFVILDASSFFRTTYVFAGIVLVG 238

Query: 564 CFVLALNR---FLWHPLYLYGTRC 584
              LA +R   FL   +  +  + 
Sbjct: 239 LIGLASDRAIAFLGRRIVHWEGKR 262



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+  A V   +       L  +   +  + +   ++++ IP LG +   +
Sbjct: 64  LATHVLASLRRVGIAFVGGAVLGTGIGLLRGRVPEIDALFLVPSELVRPIPPLGLIPLFI 123

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E + I  IF S       +          D    +RS   S WQ F
Sbjct: 124 LWFGIG--------ETSKILLIFLSVFLIAMVNAQAGAGACGLDTLRAARSMGASRWQAF 175

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + ++M      +VA+E++          G+G  I  A        
Sbjct: 176 RFVVLPSALPQIMTGLRVAMGTALTILVAAELLGG------DRGLGFVILDASSFFRTTY 229

Query: 241 ILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
           +   ++ +  +    D+    L R ++ W  K
Sbjct: 230 VFAGIVLVGLIGLASDRAIAFLGRRIVHWEGK 261


>gi|318075726|ref|ZP_07983058.1| putative glycine betaine ABC transporter substrate-binding and
           permease component [Streptomyces sp. SA3_actF]
          Length = 392

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 92/234 (39%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+ GI+ +L   ++  T          + +D   L + A  +   ++ A VI+L+    
Sbjct: 51  LLLAGILAVLAFWLRGLTAGVLSFAGFAL-IDSLELWEPAMNSFALIIVATVIALVIGVP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S+R   ++ P+LD  Q++P + +L   + +F    P          I A    
Sbjct: 110 LGIWTARSQRASAIVRPLLDFTQTMPAMVYLIPAIFFFGVGVP--------TGIVATIIF 161

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  +L E + +F  +  +  + + +P ++P ++  +   +     
Sbjct: 162 GFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGVNQVIMLNLS 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + M+  G            +  AI   D+     A ++++ +    D+++
Sbjct: 222 MVVIAGMVGAGGLGGS-------VYQAIGNADINLGSEAGISIVVLAIFLDRVV 268



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 5/180 (2%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           +    ++  +A  +   + G +    F   D L +      +   ++V  +IA +I +P+
Sbjct: 51  LLLAGILAVLAFWLRGLTAGVLSFAGFALIDSLELWEPAMNSFALIIVATVIALVIGVPL 110

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW       S+ ++P        PA V+    +           +   +          
Sbjct: 111 GIWTARSQRASAIVRPLLDFTQTMPAMVYLIPAIFFFGVGVPTGIVATIIFGFA----PA 166

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + LP   P  + G         +  +++
Sbjct: 167 VRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGVNQVIMLNLSMVVIA 226


>gi|257875084|ref|ZP_05654737.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC20]
 gi|257809250|gb|EEV38070.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC20]
          Length = 244

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +     ++     ++ RV   +  A ++ +P+GI IG    +   + P    L   
Sbjct: 37  AERFWALREVLLIHAGASLLRVFAALSGALLVGVPLGILIGRSQRVDRLLGPLLYFLYPI 96

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F P+ +      +L+      LL+       ++ ++    +  P  + +V  ++  
Sbjct: 97  PKVAFLPVFMIFFGLGNLSK----ILLIFAVIVIQVIVSIRDAVTKIPPAYFQVMKNYTN 152

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                 R++ILP + P        + G A  +   +E       +  T G+G  I  +  
Sbjct: 153 QWRHVLRFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWS 206

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           K  +P+++ G+L++      L
Sbjct: 207 KMDYPQMLSGILLIALMGYLL 227



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 14/195 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +A  + LR+ +A+  +LL       L  +S+R+  +L P+L  +  IP + FL   +
Sbjct: 47  LLIHAGASLLRVFAALSGALLVGVPLGILIGRSQRVDRLLGPLLYFLYPIPKVAFLPVFM 106

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F            L+ I  IF   V  +  S+  ++  IP    +V +++        
Sbjct: 107 IFFGLG--------NLSKILLIFAVIVIQVIVSIRDAVTKIPPAYFQVMKNYTNQWRHVL 158

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P  MP L  ++ +S+      +  +E            G+G  I  A  + D   
Sbjct: 159 RFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWSKMDYPQ 212

Query: 241 ILYAMLTMLGVIFLY 255
           +L  +L +  + +L 
Sbjct: 213 MLSGILLIALMGYLL 227


>gi|134045712|ref|YP_001097198.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
 gi|132663337|gb|ABO34983.1| binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis C5]
          Length = 277

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   ++++ +I+LL       + A+S+ + M+L P+LD+MQ++P L +L   
Sbjct: 85  GLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPA 144

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G+V G     IFA+  +            +  +  +L EV ++F  + WQ 
Sbjct: 145 VLFFG---IGEVPGVIATVIFAMPPA-----IKLTSLGIEQVSGELIEVGKAFGGTSWQI 196

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  ++   +  VV +  I  G       G+G  I   I+   L 
Sbjct: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLA 249

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A + +  +  ++D++
Sbjct: 250 PALEAGIAVTFLAVIFDRI 268



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            ++  +   + W+++      FT   ++ ++ +G      IT+  ++   +IA ++ IP+
Sbjct: 52  YLMILLISILVWKTVNLKSVPFTAFFLVIIMMMGLWDTSMITLSLIITSTLIALLLGIPL 111

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +S  + P   ++   P+  +    V       +   +   +          
Sbjct: 112 GIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIF----AMPPA 167

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  EV  +F  T W+    I LP   P  + G   A   +++  +++
Sbjct: 168 IKLTSLGIEQVSGELIEVGKAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                G       GLG  I    ++ S    +   + +    +  +R 
Sbjct: 228 GFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268


>gi|255656917|ref|ZP_05402326.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296452243|ref|ZP_06893949.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
 gi|296877595|ref|ZP_06901625.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
 gi|296258900|gb|EFH05789.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Clostridium difficile NAP08]
 gi|296431356|gb|EFH17173.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP07]
          Length = 260

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 10/177 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M RV++   I++ I IP+GI+ G    +    +     L   P     P+
Sbjct: 57  GSIFINVYASMKRVLIGFAISTAIGIPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPM 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      ++++  + + I  + + G     +   EV   F  +  +    
Sbjct: 117 LILWFGIGEESK----IIIIVLASFFPIFTSTLKGIKNCDSKLIEVGRVFEFSKLQIIFK 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           II+P        G   A G ++ A I +E+ +       ++GLG  I++  E     
Sbjct: 173 IIIPNAILDIAVGLKLALGYSFRAIIGAELVA------ASSGLGYLISDGKEMSRTD 223



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 81/227 (35%), Gaps = 15/227 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  ++      +L+  I N L +        P  +       +   S+      +  R+
Sbjct: 11  RLVKSVLIFFIILLLWKITNYLGIWSDYILPSPEKVYSTFLNMISDGSIFINVYASMKRV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    IS                +      +++ +++ P L  +   +++F      K+I
Sbjct: 71  LIGFAISTAIGIPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPMLILWFGIGEESKII 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA+ F IFT        S  + + N    L EV R F  S  Q  + + +P ++  +
Sbjct: 131 IIVLASFFPIFT--------STLKGIKNCDSKLIEVGRVFEFSKLQIIFKIIIPNAILDI 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +++   +  ++ +E++          G+G  I+   +     
Sbjct: 183 AVGLKLALGYSFRAIIGAELVAASS------GLGYLISDGKEMSRTD 223


>gi|126700612|ref|YP_001089509.1| putative ABC transporter permease [Clostridium difficile 630]
 gi|255102103|ref|ZP_05331080.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|115252049|emb|CAJ69885.1| ABC-type transport system, sulfonate-family permease [Clostridium
           difficile]
          Length = 260

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 10/177 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M RV++   I++ I +P+GI+ G    +    +     L   P     P+
Sbjct: 57  GSIFINVYASMKRVLIGFAISTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPM 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      ++++  + + I  + + G     +   EV   F  +  +    
Sbjct: 117 LILWFGIGEESK----IIIIVLASFFPIFTSTLKGIKNCDSKLIEVGRVFEFSKLQIIFK 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           II+P        G   A G ++ A I +E+ +       ++GLG  I++  E     
Sbjct: 173 IIIPNAILDIAVGLKLALGYSFRAIIGAELVA------ASSGLGYLISDGKEMSRTD 223



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 81/227 (35%), Gaps = 15/227 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  ++      +L+  I N L +        P  +       +   S+      +  R+
Sbjct: 11  RLVKSVLIFFIILLLWKITNYLGIWSDYILPSPEKVYSTFLNMISDGSIFINVYASMKRV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    IS                +      +++ +++ P L  +   +++F      K+I
Sbjct: 71  LIGFAISTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPMLILWFGIGEESKII 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA+ F IFT        S  + + N    L EV R F  S  Q  + + +P ++  +
Sbjct: 131 IIVLASFFPIFT--------STLKGIKNCDSKLIEVGRVFEFSKLQIIFKIIIPNAILDI 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +++   +  ++ +E++          G+G  I+   +     
Sbjct: 183 AVGLKLALGYSFRAIIGAELVAASS------GLGYLISDGKEMSRTD 223


>gi|52142601|ref|YP_084227.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus E33L]
 gi|51976070|gb|AAU17620.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus E33L]
          Length = 282

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 37/245 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLE 273
            F+ E
Sbjct: 275 NFKGE 279


>gi|254179920|ref|ZP_04886519.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|184210460|gb|EDU07503.1| aliphatic sulfonates ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
          Length = 273

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 12/224 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L + W       A+   +  + +  +   +   +   +     ++ +R +V   I 
Sbjct: 28  VPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIG 87

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + +G+  G        +    Q++   PA    PLV+                L+ 
Sbjct: 88  GGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI----DEKAKLFLVA 143

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P  + G   A G  
Sbjct: 144 LGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLM 203

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           W   IV+E  S        +G+G     + E      VV+G+L+
Sbjct: 204 WVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILL 241



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 85/234 (36%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  +V      ++   +      +T R L    I              S+ 
Sbjct: 44  ALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKA 103

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             + L   + ++++IP L  +   +++F           E A +F +     + +  + Y
Sbjct: 104 AEVALDSTIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTY 155

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++   L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I  
Sbjct: 156 HGIRSVDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS- 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   GIG     A +      ++  +L   G     D L   L R  + W
Sbjct: 215 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAGARQARDVLAKWLERATLRW 263


>gi|257066039|ref|YP_003152295.1| binding-protein-dependent transport systems inner membrane
           component [Anaerococcus prevotii DSM 20548]
 gi|256797919|gb|ACV28574.1| binding-protein-dependent transport systems inner membrane
           component [Anaerococcus prevotii DSM 20548]
          Length = 342

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 96/246 (39%), Gaps = 14/246 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           + +P    +    +V  ++ +  + +Q    P        +  D   L +    +   + 
Sbjct: 95  KYWPLYTAIFLIFIVFDLLTLKFNILQLPYFPWLDKVFNSMAADKSYLLESVISSLKLLF 154

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I  L   +   LA    ++   + PIL ++  IP   +L   +V  +NL+ G    
Sbjct: 155 TGYIIGGLLGIITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMVLAINLFQG---- 210

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A+F I     + +T +    + N+     E +R+   +       + +P +MP + 
Sbjct: 211 ----AVFIIALGVWFQVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIPSAMPNIF 266

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             ++ +MS     ++ +EM+ V        G+G YI       D  A+  A++ +     
Sbjct: 267 QGLVSAMSAACNALIVAEMMGVES------GLGWYITWKSSWADYTAMYGAIILLAVTFV 320

Query: 254 LYDQLL 259
           + + L+
Sbjct: 321 IVNILI 326



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +F    +    + + +      V +    D  Y++     ++  +    II  ++ I
Sbjct: 106 IFIVFDLLTLKFNILQLPYFPWLDKVFNSMAADKSYLLESVISSLKLLFTGYIIGGLLGI 165

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GI  G+   ++  I P  +LL   P   + PLV+       +N       ++  G  +
Sbjct: 166 ITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMVLA----INLFQGAVFIIALGVWF 221

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    I G       F E A +   T     R I +P   P    G ++A   A NA I
Sbjct: 222 QVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIPSAMPNIFQGLVSAMSAACNALI 281

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI   +    +  +   ++++    + +N  +
Sbjct: 282 VAEMMG------VESGLGWYITWKSSWADYTAMYGAIILLAVTFVIVNILI 326


>gi|323127201|gb|ADX24498.1| glycine betaine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 508

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 13/195 (6%)

Query: 381 WLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           WL  +   +   ++ ++IA +I +P+   +      S  +     +    P+     L +
Sbjct: 15  WLAALGEHLQISLLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI 74

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L     L +  IF     IL N I G +       E  ++F +T W   +   
Sbjct: 75  PLMGIGTLPAVTALVIYAIF----PILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFE 130

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++G  T+       + ++ +   G       GLG++I    ++ +   +++G
Sbjct: 131 IPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIG 183

Query: 559 VLIMCCFVLALNRFL 573
            +      +  N  L
Sbjct: 184 AISSALLAIIFNSLL 198


>gi|307727160|ref|YP_003910373.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307587685|gb|ADN61082.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 295

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 104/258 (40%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LP 62
           P  + +RIF   +    L+A VL+            +  +P     +      V S  L 
Sbjct: 33  PLPLGKRIFAQSWLRKALIALVLIAAWEAAARVVNNDLLLPTFGATVTAFAQGVWSGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + +   +L   ++   F FV  +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 93  QKTAVSMSVLLRGYLLGAAFAFVLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  S +W +  + Y    ++P  L    R++ L+G +    
Sbjct: 153 FGLGTG--------SLLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGVRHVLL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     + 
Sbjct: 205 ILVPAALPSILAGLRVGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLIEHLVF 280



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 89/294 (30%), Gaps = 12/294 (4%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T  L  +         PL   V +    LG   F              ++ +L   W   
Sbjct: 8   TTLLPPVRDEYERPLEPLGELVLEAPLPLGKRIF-----AQSWLRKALIALVLIAAWEAA 62

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
              V   +   + G  V  F        ++    ++M  ++   ++ +     +      
Sbjct: 63  ARVVNNDLLLPTFGATVTAFAQGVWSGELLQKTAVSMSVLLRGYLLGAAFAFVLTSLAVS 122

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  +     +    P+    P+ +        +    L  +++    W +  N  +
Sbjct: 123 TRVGRDLLSMLTAMFNPLPSIALLPIALLWFGLGTGS----LLFVLVHSVLWPLALNTYS 178

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  + P   +    ++ +TG R    I++P   P  + G       AW   I +E+    
Sbjct: 179 GFQSVPATLRMTGRNYGLTGVRHVLLILVPAALPSILAGLRVGWAFAWRTLIAAELVFGA 238

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                  GLG YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 239 SS--GNGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLIEHLVFDTLERVTVRR 290


>gi|33596045|ref|NP_883688.1| permease component of ABC transporter [Bordetella parapertussis
           12822]
 gi|33601437|ref|NP_888997.1| permease component of ABC transporter [Bordetella bronchiseptica
           RB50]
 gi|33573048|emb|CAE36690.1| permease component of ABC transporter [Bordetella parapertussis]
 gi|33575873|emb|CAE32951.1| permease component of ABC transporter [Bordetella bronchiseptica
           RB50]
          Length = 255

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV V + + +++ +PVG  +G+   + S I P      A P     PLV+     
Sbjct: 61  LMSTQRVFVGVCLGTLLAVPVGFVLGWYRGVRSFIDPVINFFRALPPIALIPLVIVYFGI 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++ + + +  +  +  G S     F  VA +   T    +R +I+P   
Sbjct: 121 GET----AKIAILFYASFFAGVIVMYEGISQINPIFVRVAKTLGATDGEIFRKVIVPLTI 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +T    A G AW   + SE+ +         GLGA I +++       + +G++ + 
Sbjct: 177 PHMLTALRVALGVAWATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIG 230

Query: 564 CFVLALN 570
              LA++
Sbjct: 231 FIALAMD 237



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 19/251 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-----TLDVHSLPQYA 65
           + RR       L+    ++ ++            P  +     +      L    LP   
Sbjct: 1   MKRRSALMRALLVLAPWLLIVLLWYGIRASGLVSPALVPSPGEVWTRFVALMQARLPHDI 60

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +T R+   + +  L       +    R +   + P+++  +++P +  +   +VYF  
Sbjct: 61  LMSTQRVFVGVCLGTLLAVPVGFVLGWYRGVRSFIDPVINFFRALPPIALIPLVIVYFGI 120

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A I  +F +  +     MY+ +  I      V+++   +  + F  + V
Sbjct: 121 G--------ETAKIAILFYASFFAGVIVMYEGISQINPIFVRVAKTLGATDGEIFRKVIV 172

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + +++   W  +VASE+I          G+G+ I  A     L  I   +
Sbjct: 173 PLTIPHMLTALRVALGVAWATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGI 226

Query: 246 LTMLGVIFLYD 256
           + +  +    D
Sbjct: 227 ICIGFIALAMD 237


>gi|209517263|ref|ZP_03266107.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502272|gb|EEA02284.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 311

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 97/241 (40%), Gaps = 16/241 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +I   + F +++ +   +   +    V      +V + + +  +   A  T   + +A++
Sbjct: 47  SILHAVPFPVLVALTFAVFWRLAGLRVAL-FGCVVLVVIAMLGVWTEAMTTLSLIATAIL 105

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
              L       L A+S R+ MV+ P+LD+MQ+ P   +L   V+ F     G V G    
Sbjct: 106 FCALLGIPIGVLCARSPRVWMVVQPVLDMMQTTPTFVYLVPVVMLFGV---GTVPGE--- 159

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
              A+ T+ +  +    +  +  +  ++ E  ++F    WQ  W + +P +MP ++  + 
Sbjct: 160 --VAVVTAAMPPLIRFTHLGIKMVETEIVEAGKAFGADKWQLLWEVQLPLAMPTILGGLN 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++       V   MI          G+G  +   +   D+       + ++ +  + D+
Sbjct: 218 QTVLTAMVMSVVVSMI-------GADGLGLVVLQGLGRLDVGRAAVGGIAIVLLAMMLDR 270

Query: 258 L 258
            
Sbjct: 271 F 271



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
           +L    F V+  +   + W+  G  V  F    ++ +  LG       T+  +   I+  
Sbjct: 48  ILHAVPFPVLVALTFAVFWRLAGLRVALFGCVVLVVIAMLGVWTEAMTTLSLIATAILFC 107

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ IP+G+     P +   +QP   ++   P  V+   VV       +   +     ++
Sbjct: 108 ALLGIPIGVLCARSPRVWMVVQPVLDMMQTTPTFVYLVPVVMLFGVGTVPGEVA----VV 163

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G      +  E   +F    W+    + LP   P  + G       A
Sbjct: 164 TAAMPPLIRFTHLGIKMVETEIVEAGKAFGADKWQLLWEVQLPLAMPTILGGLNQTVLTA 223

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              S+V  +           GLG  + +   +       +G + +    + L+RF
Sbjct: 224 MVMSVVVSMIG-------ADGLGLVVLQGLGRLDVGRAAVGGIAIVLLAMMLDRF 271


>gi|332284887|ref|YP_004416798.1| putative binding-protein-dependent transport protein [Pusillimonas
           sp. T7-7]
 gi|330428840|gb|AEC20174.1| putative binding-protein-dependent transport protein [Pusillimonas
           sp. T7-7]
          Length = 283

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A +T   M+ A++IS+        L A  + L  +++P+LD+MQ++P   +L   
Sbjct: 88  GLWDAAMQTLSLMIVAVIISVGIGIPMGILMASFKWLRTIMLPVLDVMQTMPSFVYLIPV 147

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F       +I   + A+  +               +  +  ++ E SR+F  +  ++
Sbjct: 148 VMLFNLGKIAAIIATIIYAVPPVIRL--------TDLGIRLVDSEVLEASRAFGANRAKQ 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P +MP ++  +  +       VV + MI V        G+G  +   I    + 
Sbjct: 200 LFGVQLPLAMPNIMAGVNQTTMMALAMVVIASMIGV-------KGLGYEVLQGINRLQVG 252

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A L ++ +  ++D++
Sbjct: 253 RGVLAGLGIVIIAIVFDRI 271



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 96/278 (34%), Gaps = 19/278 (6%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
           +     +P+ + V  +      +     +  L +            +W  V+  V +G+A
Sbjct: 7   APRALRAPIDDFVGNIVSNYSELLRALTQPLLDVLIWMDQIVRYSPWWAVVL--VVMGLA 64

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           W +   I   F    +L +I    +      T+  ++V +II+  I IP+GI +     +
Sbjct: 65  WLASRRIGFTFFIGAMLCLIGFIGLWDAAMQTLSLMIVAVIISVGIGIPMGILMASFKWL 124

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + + P   ++   P+ V+   VV   +   +   +   +  +      ++     G   
Sbjct: 125 RTIMLPVLDVMQTMPSFVYLIPVVMLFNLGKIAAIIATIIYAV----PPVIRLTDLGIRL 180

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             ++  E + +F     +    + LP   P  + G       A    +++ +        
Sbjct: 181 VDSEVLEASRAFGANRAKQLFGVQLPLAMPNIMAGVNQTTMMALAMVVIASMIG------ 234

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              GLG  + +   +      VL  L +    +  +R 
Sbjct: 235 -VKGLGYEVLQGINRLQVGRGVLAGLGIVIIAIVFDRI 271


>gi|320530250|ref|ZP_08031320.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320137683|gb|EFW29595.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 247

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ + + +A  +  P+GI +G+ P ++  + P   L    P     P+
Sbjct: 49  GVIAVHAGYSLMRIALGLSLAVAVGYPIGILMGYFPRVNRILAPMLYLAYPVPKIALLPV 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+               LL+     + ++  V    +  P    E       + W+  R+
Sbjct: 109 VMLIFGVGESGK----ILLIFLIIVFQVVVAVRDATAGIPAATYEPLRVLGASFWQMVRH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P ++T    A   A +    +E            G+G YI ++  + ++ ++ 
Sbjct: 165 IVLPASLPKFITAVRIAMATAISVLFFTETFG------TKYGIGYYIMDAWLRVNYLDMY 218

Query: 557 LGVLIMCCFV 566
            G+ ++    
Sbjct: 219 AGIAVLSAIG 228



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 14/189 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A  + +R+   + +++   +    L     R+  +L P+L +   +P +  L   ++ F
Sbjct: 54  HAGYSLMRIALGLSLAVAVGYPIGILMGYFPRVNRILAPMLYLAYPVPKIALLPVVMLIF 113

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                GK        I  IF   V+ +  ++  +   IP    E  R    S WQ   ++
Sbjct: 114 GVGESGK--------ILLIFLIIVFQVVVAVRDATAGIPAATYEPLRVLGASFWQMVRHI 165

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P  +  + ++M+       A  ++   +T     GIG YI  A    + L +  
Sbjct: 166 VLPASLPKFITAVRIAMA------TAISVLFFTETFGTKYGIGYYIMDAWLRVNYLDMYA 219

Query: 244 AMLTMLGVI 252
            +  +  + 
Sbjct: 220 GIAVLSAIG 228


>gi|167582013|ref|ZP_02374887.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 268

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R  V   I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 70  VSAWRAFVGFAIGGGVGLALGLATGLSKAAEIALDSTIQMIRNIPALAMIPLVILWFGI- 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +      E+A S+ + G+  +R +ILPG  P
Sbjct: 129 ---DEKAKLFLVALGVFFPVYINTYHGIRSVDAGLVEMARSYGVKGFALYRDVILPGALP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 186 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAA 239

Query: 565 FVLALNRF 572
                +  
Sbjct: 240 LGKLADVL 247



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       ++   +      +  R      I              S+   + L 
Sbjct: 45  LPEPFAVARAAWALVESGDMWANVKVSAWRAFVGFAIGGGVGLALGLATGLSKAAEIALD 104

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 105 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPVYINTYHGIRSV 156

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ + G+  +  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 157 DAGLVEMARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------A 210

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   L R M+ W   ++
Sbjct: 211 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERAMLRWHPAYQ 263


>gi|304394282|ref|ZP_07376205.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
 gi|303293722|gb|EFL88099.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
          Length = 277

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ V      +  + VG+ IG        + P    +   P     PL V       
Sbjct: 88  SLTRLAVGAFFGVLAGVAVGVAIGLFSLARGALVPLVAAIFPIPKIALLPLFVIWFGIGE 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+ FGT    +        A       +  SF +  W   R I+LPG  P 
Sbjct: 148 GSK----YALIAFGTFTPTVVATYGAVDAVDRTLIRMGQSFGLPWWSIVRKIVLPGALPG 203

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G   +   A    + +E+         T G+GAYI E+        +  GV I+   
Sbjct: 204 ILSGLRVSLAIAIILLVAAEMLG------ATYGIGAYILEAGSLYDLERLFAGVTILSLL 257

Query: 566 VLAL 569
            L +
Sbjct: 258 GLLV 261



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 89/262 (33%), Gaps = 24/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQYASR 67
             P         L+IG++ +   G +           P  + +          L ++   
Sbjct: 28  FAPKPVVWAGAALLIGLLVLAEIGTRTGDISALTLPRPSAVWNTFVELWTSGLLFKHLVP 87

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+       +L                  LVP++  +  IP +  L   V++F    
Sbjct: 88  SLTRLAVGAFFGVLAGVAVGVAIGLFSLARGALVPLVAAIFPIPKIALLPLFVIWFGIGE 147

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K           I          + Y ++  + R L  + +SF L  W     + +P 
Sbjct: 148 GSKYA--------LIAFGTFTPTVVATYGAVDAVDRTLIRMGQSFGLPWWSIVRKIVLPG 199

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++PG++  + +S++     +VA+EM+          GIG+YI  A    DL  +   +  
Sbjct: 200 ALPGILSGLRVSLAIAIILLVAAEMLG------ATYGIGAYILEAGSLYDLERLFAGVTI 253

Query: 248 MLGVIFLYDQL---LFRPMIVW 266
           +  +  L       + R  + W
Sbjct: 254 LSLLGLLVSWAIGRIERRFLAW 275


>gi|293414214|ref|ZP_06656863.1| ssuC [Escherichia coli B185]
 gi|291434272|gb|EFF07245.1| ssuC [Escherichia coli B185]
          Length = 264

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTFSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 88/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T+     +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTFSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|148272971|ref|YP_001222532.1| putative anion ABC transporter permease [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830901|emb|CAN01845.1| putative anion ABC transporter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 287

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 14/221 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
                 P D+V       +   L QY + +  R+L    +      V   +   SR   +
Sbjct: 69  AHLLPAPLDVVRAGAQLAEQGILGQYVAISLQRVLLGFALGATVGLVLGAVVGLSRVGRL 128

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P     +++P L ++   +++       KV    + A+F ++T+        +  +L
Sbjct: 129 LLAPTAGAFRTVPSLAWVPLLLLWMGINEDSKVTLVAIGAMFPVYTT--------VAGAL 180

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++   L EV R+F L+       + +P  +P +V  + ++++  W F+VA+E++     
Sbjct: 181 RHVDPHLVEVGRAFGLTRIPLLVTVQLPAVLPAVVSGLRLALAQSWLFLVAAELLAAS-- 238

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G  +  +     +  +L A++ +  +  + D ++
Sbjct: 239 ----MGLGYLLTESSANGRVDRVLLAIVLLAVLGAVTDAVV 275



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 17/271 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            ++ R             + +     V  +           V   +    +  +      
Sbjct: 26  GRVARRAPGRATGGALVRVAVGLVVPVLVVGLWAVVTATGAVPAHLLPAPLDVVRAGAQL 85

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   +     I++ RV++   + + + + +G  +G        + P A      P+  +
Sbjct: 86  AEQGILGQYVAISLQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTAGAFRTVPSLAW 145

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +     +       L+  G  + +   V            EV  +F +T    
Sbjct: 146 VPLLLLWMGINEDSK----VTLVAIGAMFPVYTTVAGALRHVDPHLVEVGRAFGLTRIPL 201

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP + P  V+G   A   +W   + +E+ +       + GLG  + ES+  G   
Sbjct: 202 LVTVQLPAVLPAVVSGLRLALAQSWLFLVAAELLA------ASMGLGYLLTESSANGRVD 255

Query: 554 EVVLGV-------LIMCCFVLALNRFLWHPL 577
            V+L +        +    V  + R L    
Sbjct: 256 RVLLAIVLLAVLGAVTDAVVGLVERVLVRRW 286


>gi|289178787|gb|ADC86033.1| Alkanesulfonates transport system permease protein [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 331

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 11/269 (4%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
             S  +  P + + K   R              + C+    + ++ + W     G A   
Sbjct: 55  ARSAAYAVPAAEHTKTASRIGTRFIPWHHGRAPRFCALWASTVLIVLAWALATGGPAHNR 114

Query: 360 AWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  S G +            ++    ++++RV + + +  +  +P GI  G      + +
Sbjct: 115 SLPSPGEVWQALLALHSEGLLLPSIGVSLYRVSLGVALGVVTAVPAGIIAGSSTIGHAIM 174

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
                +L A P     PL++  +             L+  G    I  NV  G       
Sbjct: 175 DKPIHMLRAVPFPALSPLLIVLLGIGET----MKVALIAIGAFALIYVNVRDGVRGIDPK 230

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+A ++H+     +  I+L G  P ++TG   A   +W A +  E  +       + G
Sbjct: 231 LLELAQAYHLPKRTVFAKILLRGTLPRFMTGLRFALTVSWIALVTCETVN------SSAG 284

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G  ++ S +     ++VL +++     L
Sbjct: 285 IGYILSRSQQFYRTDQMVLCIVLYAFLGL 313



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 82/248 (33%), Gaps = 14/248 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R        +  VL   +        +    P ++   +        L      +  R
Sbjct: 86  APRFCALWASTVLIVLAWALATGGPAHNRSLPSPGEVWQALLALHSEGLLLPSIGVSLYR 145

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +   + + ++       +A  S     ++   + +++++P        +V        KV
Sbjct: 146 VSLGVALGVVTAVPAGIIAGSSTIGHAIMDKPIHMLRAVPFPALSPLLIVLLGIGETMKV 205

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   I+         ++   +  I   L E+++++ L     F  + +  ++P 
Sbjct: 206 ALIAIGAFALIYV--------NVRDGVRGIDPKLLELAQAYHLPKRTVFAKILLRGTLPR 257

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +  +++  W  +V  E +          GIG  ++ + +      ++  ++    +
Sbjct: 258 FMTGLRFALTVSWIALVTCETVNSSA------GIGYILSRSQQFYRTDQMVLCIVLYAFL 311

Query: 252 IFLYDQLL 259
               + L+
Sbjct: 312 GLFSEWLV 319


>gi|146276817|ref|YP_001166976.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555058|gb|ABP69671.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 265

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 95/272 (34%), Gaps = 21/272 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHG----IQETTVPRDIVDIVPITLDVHSLPQY 64
           P   RR+       L    ++ +  +L  G          P  ++  +        L ++
Sbjct: 5   PPRLRRLARAGAGWLLPATILALWELLTRGGAIPAHVLPAPSAVLAALVQLASSGDLFRH 64

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R L+   I     F        S     +    L ++++IP L  +   +++F 
Sbjct: 65  IGISAWRALAGFAIGGSIGFALGLANGLSALSRDLTDTTLQMIRNIPHLALIPLVILWFG 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +F +     + +  +    + ++   L E+ R   +     FW + 
Sbjct: 125 ID--------EEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEMGRIHGMGRAALFWRVI 176

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   +  ++   W  ++ +E I          G+G     A +   +  ++ +
Sbjct: 177 LPGALPAIFVGLRYALGIMWLTLIVAETIAANS------GLGYMAMQAREFLLIDVVVLS 230

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
           +L    +  L D   +LL R  + W   F  +
Sbjct: 231 ILIYALLGKLADSAARLLERRTLAWHPSFSAQ 262



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 76/257 (29%), Gaps = 15/257 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
               +  +   +   +   W  +  G AI   +       +           +     I+
Sbjct: 9   RRLARAGAGWLLPATILALWELLTRGGAIPAHVLPAPSAVLAALVQLASSGDLFRHIGIS 68

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +R +    I   I   +G+  G             Q++   P     PLV+        
Sbjct: 69  AWRALAGFAIGGSIGFALGLANGLSALSRDLTDTTLQMIRNIPHLALIPLVILWFGI--- 125

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+  G  + I  N + G  +      E+     +     +  +ILPG  P  
Sbjct: 126 -DEEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEMGRIHGMGRAALFWRVILPGALPAI 184

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A G  W   IV+E  +        +GLG    ++ E      VVL +LI     
Sbjct: 185 FVGLRYALGIMWLTLIVAETIA------ANSGLGYMAMQAREFLLIDVVVLSILIYALLG 238

Query: 567 LALN---RFLWHPLYLY 580
              +   R L      +
Sbjct: 239 KLADSAARLLERRTLAW 255


>gi|254475309|ref|ZP_05088695.1| choline ABC transporter, permease protein [Ruegeria sp. R11]
 gi|214029552|gb|EEB70387.1| choline ABC transporter, permease protein [Ruegeria sp. R11]
          Length = 276

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + +   +LSA ++ +         AA   RL + + P+LD+MQ++P   +L   +V
Sbjct: 90  WEETTESLTLVLSACLVCMAIGVPIGIAAAHRPRLFVAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF +            +  + + P+ L E + +F  +  Q  W
Sbjct: 150 FFG---IGMVPGLIATVIFVLPAP-----IRLTHLGVSSTPKPLLEAAEAFGATKSQTLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++          G+G  +  A+ + +    
Sbjct: 202 KVELPYALPQIMTGLNQTIMLSLSMVVIAALV-------GADGLGVPVVRALNQVNTALG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             +   ++ V  + D++L
Sbjct: 255 FESGFVIVVVAIILDRVL 272



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 25/280 (8%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
              ++      FF  LS  ++ L   +  +    P  F+ +     ++++L   W   V 
Sbjct: 18  VFEWLQDIGEPFFDWLSWLLELLIDGILWV-LQTPHPFITVGVFVAITWLLQRNWKICVF 76

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                +      +I+N   +++          ++  V+   ++   I +P+GI    RP 
Sbjct: 77  VALGFL------FILNQGYWEE-------TTESLTLVLSACLVCMAIGVPIGIAAAHRPR 123

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   ++P   L+   P  V+    +       +   +   + ++      I      G S
Sbjct: 124 LFVAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIRL-THLGVS 179

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    E A +F  T  +    + LP   P  +TG       + +  +++ +       
Sbjct: 180 STPKPLLEAAEAFGATKSQTLWKVELPYALPQIMTGLNQTIMLSLSMVVIAALVG----- 234

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               GLG  +  +  + +         ++    + L+R L
Sbjct: 235 --ADGLGVPVVRALNQVNTALGFESGFVIVVVAIILDRVL 272


>gi|306827362|ref|ZP_07460649.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           pyogenes ATCC 10782]
 gi|304430509|gb|EFM33531.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           pyogenes ATCC 10782]
          Length = 508

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E  ++F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 195

Query: 571 RFL 573
             L
Sbjct: 196 SLL 198


>gi|294853720|ref|ZP_06794392.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294819375|gb|EFG36375.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 272

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
            +IG   ++ + + P    L   P     PL V       ++      +L+ FGT    +
Sbjct: 103 FFIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGIDEMSK----YMLIAFGTFTPTV 158

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                           +  SF ++ W   R I+LPG FP  ++G   +   A    + +E
Sbjct: 159 VATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAE 218

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +           G+G+YI E+       ++  GV I+    L +N  +      +  R  
Sbjct: 219 MLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVI-----GWVERRF 267



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 17/180 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
                 +   LVP++  +  IP +  L   V++F           E++    I       
Sbjct: 105 IGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGID--------EMSKYMLIAFGTFTP 156

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              + Y ++ N+ R L  + +SF LS W     + +P + P ++  + +S+S     +VA
Sbjct: 157 TVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVA 216

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           +EM+          G+GSYI  A    DL  +   +  +  +  + + ++    R  + W
Sbjct: 217 AEMLG------AQYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIVNVVIGWVERRFLNW 270


>gi|317407313|gb|EFV87285.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 274

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L A  L   +  I L        P  ++      +    L +    +  R L+   I  +
Sbjct: 35  LAAIALWWLLARIDLVNSALLVSPEKVLATAADQILGGKLWRALGASLGRELTGFAIGTV 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L   S     ++ P  +  + I +  ++    V+F      KV+   LAA+  
Sbjct: 95  AGLLLGVLLGLSPAFNRLVGPSFNTFKQISLFAWIPLISVWFGLGDTAKVVFLSLAALV- 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +    + N P  L EV+R +  S WQ F  + +P + P +   + +++ 
Sbjct: 154 -------PVVVNTCDGVRNTPPKLLEVARVYGYSRWQTFAQVVLPAAAPAIFTGVYLALI 206

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E ++V        GIG+ +    +   +  +++ M  +  + +L + L
Sbjct: 207 YSWLATIGAEYLLVAGV-----GIGNLLIEGSEHFQMDLVIFGMFVVGVIGWLMNAL 258



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 84/244 (34%), Gaps = 15/244 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
            + ++W      +       S   ++     Q +   +W     ++ R +    I ++  
Sbjct: 37  AIALWWLLARIDLVNSALLVSPEKVLATAADQILGGKLWRALGASLGRELTGFAIGTVAG 96

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ +G  P  +  + P            + PL+            ++LS        
Sbjct: 97  LLLGVLLGLSPAFNRLVGPSFNTFKQISLFAWIPLISVWFGLGDTAKVVFLS----LAAL 152

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N   G    P    EVA  +  + W+ +  ++LP   P   TG   A   +W A+
Sbjct: 153 VPVVVNTCDGVRNTPPKLLEVARVYGYSRWQTFAQVVLPAAAPAIFTGVYLALIYSWLAT 212

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           I +E      +     G+G  + E +E      V+ G+ ++      +N      L    
Sbjct: 213 IGAEYLLVAGV-----GIGNLLIEGSEHFQMDLVIFGMFVVGVIGWLMN-----ALARVA 262

Query: 582 TRCL 585
            R L
Sbjct: 263 ERRL 266


>gi|148243573|ref|YP_001228730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. RCC307]
 gi|147851883|emb|CAK29377.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Synechococcus sp. RCC307]
          Length = 272

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 89/265 (33%), Gaps = 13/265 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            K    L +     P     L  +  +  +L       +  V           + +  + 
Sbjct: 11  AKPLPLLSIGATPSPLVRSGLQVSSLLIPLLLWTVISALELVDGKFLPSPAAVLESLASM 70

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +      +  RV     +A+++ +P+GI +G  P I +  +P   +L   PA  F
Sbjct: 71  AREGILFQDIVASTGRVFAGFFLATLVAVPLGICMGVYPAICALCEPLIAMLRYMPAAAF 130

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +             L+  GT ++ +  V+      P +  E   +    G + 
Sbjct: 131 IPLLIIYLGIG----EEPKIALIFLGTVYFNVLMVMDAVKFVPKELIETTLTLGGRGRQV 186

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++     P  +         +WN  +V+E+ +         GLG  I  +       
Sbjct: 187 LVQVVARYSLPSIIDTLRINIATSWNLVVVAELVA------AEVGLGKRIQLAQRFFRTD 240

Query: 554 EVVLGVLIMCCFVLALN---RFLWH 575
           ++   ++++     A++   R L  
Sbjct: 241 QIFAELIVLGLIGFAIDMGFRLLLR 265



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 96/249 (38%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +L   I  + L   +    P  +++ +        L Q    +T R+ +   ++ L
Sbjct: 37  LIPLLLWTVISALELVDGKFLPSPAAVLESLASMAREGILFQDIVASTGRVFAGFFLATL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                         +  +  P++ +++ +P   F+   ++Y            E   I  
Sbjct: 97  VAVPLGICMGVYPAICALCEPLIAMLRYMPAAAFIPLLIIYLGIG--------EEPKIAL 148

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   V+     +  ++  +P++L E + +    G Q    +   +S+P ++  + ++++
Sbjct: 149 IFLGTVYFNVLMVMDAVKFVPKELIETTLTLGGRGRQVLVQVVARYSLPSIIDTLRINIA 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  VV +E++          G+G  I LA +      I   ++ +  + F  D   +L
Sbjct: 209 TSWNLVVVAELVA------AEVGLGKRIQLAQRFFRTDQIFAELIVLGLIGFAIDMGFRL 262

Query: 259 LFRPMIVWS 267
           L R    W+
Sbjct: 263 LLRLSCRWA 271


>gi|171320075|ref|ZP_02909143.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171094672|gb|EDT39718.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 321

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 130 SAARVFGAFVLAAAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 188 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 246 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 299

Query: 566 VLALNRFLWHPLYLYGTRC 584
               +  +      +  R 
Sbjct: 300 AWLFDLAM-----RWVERR 313



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A V++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 123 LSEHLLWSAARVFGAFVLAAAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 182

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 183 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 234

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 235 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 288

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 289 VVMGILIIGAIAWLFDLAMRWVERRVVPWKGR 320


>gi|91205579|ref|YP_537934.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
 gi|91069123|gb|ABE04845.1| ABC-type anion transport system permease component [Rickettsia
           bellii RML369-C]
          Length = 144

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/130 (44%), Positives = 83/130 (63%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           NI+DL   +++ GII  +  G+ E       +    I LD   L +Y  +TTLRM  A++
Sbjct: 14  NIWDLCIILIICGIIFAIGKGLHEMDSSIGAIAKNEIYLDPIHLLKYTLQTTLRMFIAII 73

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ISL+   +Y T+AAK +    +L+PILDI QS+PILGFLTFTV +F++++P   +G E A
Sbjct: 74  ISLITAIIYGTIAAKYKTAENILIPILDIFQSVPILGFLTFTVTWFVSIFPNSSLGIECA 133

Query: 138 AIFAIFTSQV 147
            IFA FT+QV
Sbjct: 134 VIFATFTNQV 143



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            SIG I  +  Y D ++++     T  R+ + III+ I  I  G          + + P 
Sbjct: 40  SSIGAIAKNEIYLDPIHLLKYTLQTTLRMFIAIIISLITAIIYGTIAAKYKTAENILIPI 99

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +  + P   F    V+       N +L +   +IF T 
Sbjct: 100 LDIFQSVPILGFLTFTVTWFVSIFPNSSLGIECAVIFATF 139


>gi|227502678|ref|ZP_03932727.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium accolens
           ATCC 49725]
 gi|227076408|gb|EEI14371.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium accolens
           ATCC 49725]
          Length = 296

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 90/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +++ I  ++    +   +    +    + L +        +T   +L + + +++    
Sbjct: 54  AVMLVIFAVIAWFFRSWRLALGSIIGFVLVLGMRQ-WDTMLQTMSLVLVSTLTAVILAIP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AAKS  +  ++ PI+D MQ++P   +L   V +F     G V G     IFA+   
Sbjct: 113 LGIWAAKSNTVSAIVRPIMDFMQTMPAFVYLIPAVTFFS---IGVVPGVFSTIIFALPPG 169

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++  E  RS+  +  Q    + +P ++P ++  +   +     
Sbjct: 170 -----VRMTELGIRQVDQETVEAGRSYGATSGQILRGIQIPLAIPTIMAGINQVIMLSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             V + M+          G+G  +  AI   D+   + A L ++ +    D+L
Sbjct: 225 MAVIAGMV-------GADGLGKEVTSAISTLDVAQGVEAGLAVVILAVFLDRL 270



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 96/275 (34%), Gaps = 15/275 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           IG  + +    L++N K L      +     E F +  ++   + ML IF        + 
Sbjct: 11  IGDWTNDGIDWLTDNAKWLFDAFSALMKFLVEGFSEALTSVPAAVMLVIFAVIAWFFRSW 70

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +A  SI   V     +    ++     TM  V+V  + A I+ IP+GIW      +S+ 
Sbjct: 71  RLALGSIIGFVLVLGMRQWDTMLQ----TMSLVLVSTLTAVILAIPLGIWAAKSNTVSAI 126

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   PA V+    V+  S   +       +          +     G      
Sbjct: 127 VRPIMDFMQTMPAFVYLIPAVTFFSIGVVPGVFSTIIF----ALPPGVRMTELGIRQVDQ 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E   S+  T  +  R I +P   P  + G       + + ++++ +           
Sbjct: 183 ETVEAGRSYGATSGQILRGIQIPLAIPTIMAGINQVIMLSLSMAVIAGMVG-------AD 235

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           GLG  +  +       + V   L +    + L+R 
Sbjct: 236 GLGKEVTSAISTLDVAQGVEAGLAVVILAVFLDRL 270


>gi|87119552|ref|ZP_01075449.1| putative permease of ABC transporter [Marinomonas sp. MED121]
 gi|86165028|gb|EAQ66296.1| putative permease of ABC transporter [Marinomonas sp. MED121]
          Length = 267

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + VI ++ +    +  +      + +  + +          +T + ++SA  IS+L    
Sbjct: 40  LAVIAVVLVGAWFLHRSIGLLVFISLALLLILNLGYWVETIQTLVLVVSATFISVLIGVP 99

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA    L  ++ PILD+MQ+IP   +L  T++ F     G V G     IFA+   
Sbjct: 100 LGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLILFGL---GYVPGLISTIIFAVAAP 156

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  +  +P +L E   +F  +  +  + + +P +MP ++  +   +     
Sbjct: 157 -----IRLTYLGISKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAGITQCIMLSLS 211

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + ++          G+G  +  A+   ++     A + ++ V  + D++
Sbjct: 212 MVVIAALV-------GADGLGKPVIRALNTVNISQGFEAGIAIVLVAIMLDRI 257



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +    +V    +  +   + +I         L        T+  VV    I+ +I +P
Sbjct: 40  LAVIAVVLVGAWFLHRSIGLLVFISLALLLILNLGYWVETIQTLVLVVSATFISVLIGVP 99

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP + + ++P   L+   P  V+    +  +  + L     L   +IF     
Sbjct: 100 LGIAAAHRPWLYTIMRPILDLMQTIPTFVYL---IPTLILFGLGYVPGLISTIIFAVAAP 156

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S  PN+  E   +F  T  +    + LP   P  + G       + +  ++
Sbjct: 157 IRL-TYLGISKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAGITQCIMLSLSMVVI 215

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +  +    +  +     + +    + L+R 
Sbjct: 216 AALVG-------ADGLGKPVIRALNTVNISQGFEAGIAIVLVAIMLDRI 257


>gi|24112343|ref|NP_706853.1| taurine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|24051208|gb|AAN42560.1| similar to taurine transport system permease protein [Shigella
           flexneri 2a str. 301]
          Length = 217

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      +   ++  SR    +L   + +++++P L  +   +++
Sbjct: 14  QHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E A IF +    ++ +  + +  + NI R L E++RS+ LSG   F +
Sbjct: 74  FGID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIH 125

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  ++   W  ++ +E I          GIG     A +      ++
Sbjct: 126 VILPDALPSIMVGVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVV 179

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
            A++    +  L D   QLL R  + W+  + L+ TT
Sbjct: 180 VAIILYALLGKLADVSAQLLERLWLRWNPAYHLKETT 216



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 19/209 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+     
Sbjct: 17  AISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI 76

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++G   + ++ILP   
Sbjct: 77  ----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDAL 132

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 133 PSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 186

Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583
                       L R    W+P Y     
Sbjct: 187 LLGKLADVSAQLLERLWLRWNPAYHLKET 215


>gi|119899803|ref|YP_935016.1| putative aliphatic sulfonates transport systempermease [Azoarcus
           sp. BH72]
 gi|119672216|emb|CAL96130.1| putative aliphatic sulfonates transport system,permease protein
           [Azoarcus sp. BH72]
          Length = 257

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V   L + W  +V G  +          V   T      ++     T    +    IA +
Sbjct: 15  VILFLGVLWEAIVVGFKVPEFLFPSLSAVWTATLTHWDPIMMHATQTFLTTMAGFGIAVV 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G  +G  P +   + P      + P   F P++V           +   L     
Sbjct: 75  FGLALGAAVGSSPVVYKALYPLLVGFNSIPKVAFVPVLVVWFGIG----TIPAILTAFLI 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + ++ NV  G +    + ++V  S   +     + + LP   PY+      A   A+ 
Sbjct: 131 SFFPVVVNVATGLATLEPELEDVLRSLGASRLDILKKVGLPRAMPYFFASLKVAITLAFV 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHP 576
            S++SE  +         G+G  +  ++       V  G++++    + +     F+   
Sbjct: 191 GSVISETVA------SNLGIGYLMMAASSAMDMALVFAGLIVIGVMGVVMYELFAFVERR 244

Query: 577 LYLYGTR 583
           L  +  R
Sbjct: 245 LTGWAHR 251



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 100/254 (39%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++ F+ V+    ++   + E   P               +  +A++T L  ++   I
Sbjct: 12  PWLVILFLGVLWEAIVVGFKVPEFLFPSLSAVWTATLTHWDPIMMHATQTFLTTMAGFGI 71

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++F          S  +   L P+L    SIP + F+   VV+F            + A
Sbjct: 72  AVVFGLALGAAVGSSPVVYKALYPLLVGFNSIPKVAFVPVLVVWFGIG--------TIPA 123

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F    + +  ++   L  +  +LE+V RS   S       +G+P +MP    ++ +
Sbjct: 124 ILTAFLISFFPVVVNVATGLATLEPELEDVLRSLGASRLDILKKVGLPRAMPYFFASLKV 183

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +++  +   V SE +          GIG  +  A    D+  +   ++ +  +  +  +L
Sbjct: 184 AITLAFVGSVISETVASN------LGIGYLMMAASSAMDMALVFAGLIVIGVMGVVMYEL 237

Query: 259 ---LFRPMIVWSNK 269
              + R +  W+++
Sbjct: 238 FAFVERRLTGWAHR 251


>gi|154707306|ref|YP_001425237.1| glycine betaine transport system permease protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|154356592|gb|ABS78054.1| glycine betaine transport system permease protein [Coxiella
           burnetii Dugway 5J108-111]
          Length = 526

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 19/218 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  +  I   +L    L ++   +    LSA +++++      T+      L   ++
Sbjct: 1   MSTPTGMFLINNASLLGVKLLEHLYLS----LSATLLAIIIGIPLGTVILNRHALKNTVL 56

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  I Q+IP L  L F + +    +           I  +    +  +  + +  L  +
Sbjct: 57  SVTSIFQTIPSLALLAFLIPFIGIGF--------KPTIVTLTLYALLPIIRNTFMGLTGV 108

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +  E +R+   + WQ+   + +P ++P +V  +  + +        +  I  G     
Sbjct: 109 PPESVEAARAMGFTRWQRLRLVELPLALPIIVAGIRTATAMTIGITTIAAFIGEG----- 163

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G +I   +   D   IL   +    +    D ++
Sbjct: 164 --GLGDFITQGLSLNDPRLILLGAIPTALLAIALDFII 199



 Score = 89.6 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +   ++A II IP+G  I  R  + + +     +    P+      ++  +     
Sbjct: 24  LYLSLSATLLAIIIGIPLGTVILNRHALKNTVLSVTSIFQTIPSLALLAFLIPFIGIGFK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      I+ N   G +  P +  E A +   T W+  R + LP   P  
Sbjct: 84  PTIVTLTLYALL----PIIRNTFMGLTGVPPESVEAARAMGFTRWQRLRLVELPLALPII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G  TA       + ++     G       GLG +I +         ++LG +      
Sbjct: 140 VAGIRTATAMTIGITTIAAFIGEG-------GLGDFITQGLSLNDPRLILLGAIPTALLA 192

Query: 567 LALN 570
           +AL+
Sbjct: 193 IALD 196


>gi|323976679|gb|EGB71767.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 264

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  ++           L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRVLPSPEGVMTAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRVLPSPEGVMTAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|313199894|ref|YP_004038552.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|312439210|gb|ADQ83316.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 264

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 94/229 (41%), Gaps = 16/229 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
               +     +  +D +  +  +     L    + +  R L+ + I   F  V     A 
Sbjct: 38  ASFAYAFSSLSQMQDALRELIAS---GDLQVNLAASLQRALTGLAIGGSFGLVLGVSMAS 94

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR +   + P+  I++ +P++G +    ++  N         + A +F +  S  + +  
Sbjct: 95  SRFIDTSVGPLYHILRQVPLMGLVPVFSLWLGNG--------DTAKLFIVCLSAFFPLVL 146

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + Y+SL  +     EV    +LS  Q+F ++ +P ++P +   +  +++  W   + SE+
Sbjct: 147 ATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAALPNIFTGVSFALAMAWLSTIGSEI 206

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +          G+G+ +  A     +  ++   + +  V +L   +L+R
Sbjct: 207 LFNAGA-----GLGNLMMNAEMASRMDILVVVTILIGVVGYLLTFVLYR 250



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 9/192 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +  + I     + +G+ +     I + + P   +L   P     P+    +  
Sbjct: 68  AASLQRALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLG- 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N +     ++     + ++             F EV +   ++  + +R+I+LP   
Sbjct: 127 ---NGDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   AW ++I SE+           GLG  +  +        +V+  +++ 
Sbjct: 184 PNIFTGVSFALAMAWLSTIGSEILFNAG-----AGLGNLMMNAEMASRMDILVVVTILIG 238

Query: 564 CFVLALNRFLWH 575
                L   L+ 
Sbjct: 239 VVGYLLTFVLYR 250


>gi|226364432|ref|YP_002782214.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242921|dbj|BAH53269.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 285

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 12/275 (4%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +     +P  +      R +  +       F +L     +  +  +     +      
Sbjct: 7   APAPARTVAPGLDRPGAADRQIRRLGLRKGLPFSRLAGVLLLLAVWAVGSLAGMIDARKL 66

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            A  ++           +L        ++ R  V  +   +I   + +  G      + I
Sbjct: 67  SAPWTVVTTAVDLISTGILQ--EHIAASLSRAAVGFVFGVVIGTALAVVAGLTRSGDALI 124

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
               QL  A P     PL++  +         +  +++  G   ++        ++  N 
Sbjct: 125 DGPIQLKRAIPTLGLIPLLILWLGIGET----FKIVIIALGVVVHMYIQTHNSLTSIDNR 180

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           + E+A    ++   + R ++LPG  P +  G   +  GAW   IV E  +        TG
Sbjct: 181 YVELAEILGLSRATFIRKVVLPGAMPGFFLGLRLSVTGAWLTLIVVEGIN------AVTG 234

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG  +  +   G    +++G+ +   F L  +  L
Sbjct: 235 LGKMMYNAQNYGQSDVILVGLAVYGIFGLLSDAVL 269



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 88/233 (37%), Gaps = 15/233 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            ++ + P  +V      +    L ++ + +  R     V  ++     A +A  +R    
Sbjct: 63  ARKLSAPWTVVTTAVDLISTGILQEHIAASLSRAAVGFVFGVVIGTALAVVAGLTRSGDA 122

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++   + + ++IP LG +   +++            E   I  I    V +M    + SL
Sbjct: 123 LIDGPIQLKRAIPTLGLIPLLILWLGIG--------ETFKIVIIALGVVVHMYIQTHNSL 174

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I     E++    LS       + +P +MPG    + +S++G W  ++  E I     
Sbjct: 175 TSIDNRYVELAEILGLSRATFIRKVVLPGAMPGFFLGLRLSVTGAWLTLIVVEGI----- 229

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              + G+G  +  A        ++   L + G+  L    + R +   S  +R
Sbjct: 230 -NAVTGLGKMMYNAQNYGQ-SDVILVGLAVYGIFGLLSDAVLRYIERRSLSWR 280


>gi|220914021|ref|YP_002489330.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Arthrobacter chlorophenolicus A6]
 gi|219860899|gb|ACL41241.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 286

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+  R  + +    ++   + +  G      + I    Q+  A P     PL++     
Sbjct: 91  AISAQRAGLGLFFGIVVGAVLALLAGLSRVGEALIDGPVQIKRAIPGLALIPLLILWFGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     L +  G    I     AG       + E+A +  ++   + R ++LPG  
Sbjct: 151 ----DETMKVLTITLGVFVPIYLQTHAGLRGIDLRYVELAQTVGLSRAGFIRKVVLPGAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +  G   A  GAW + +V E  +       T+G+G  +  +   G    +VLG+ +  
Sbjct: 207 PGFFLGLRFAVTGAWVSLVVVEQIN------ATSGIGYMMELARTYGQTNIIVLGLAVYG 260

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 261 ILGLLSDGIV 270



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 83/229 (36%), Gaps = 17/229 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  +V      +    L +  + +  R    +   ++   V A LA  SR    ++ 
Sbjct: 67  LSEPWTVVATAGELIADGRLQENLAISAQRAGLGLFFGIVVGAVLALLAGLSRVGEALID 126

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + I ++IP L  +   +++F      KV+   L     I+           +  L  I
Sbjct: 127 GPVQIKRAIPGLALIPLLILWFGIDETMKVLTITLGVFVPIY--------LQTHAGLRGI 178

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++++  LS       + +P ++PG    +  +++G W  +V  E I        
Sbjct: 179 DLRYVELAQTVGLSRAGFIRKVVLPGALPGFFLGLRFAVTGAWVSLVVVEQI------NA 232

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             GIG  + LA        I+  +     +  L D   + + R  + W 
Sbjct: 233 TSGIGYMMELARTYGQTNIIVLGLAVYGILGLLSDGIVRFIERKALSWQ 281


>gi|74311492|ref|YP_309911.1| alkanesulfonate transporter permease subunit [Shigella sonnei
           Ss046]
 gi|89107784|ref|AP_001564.1| alkanesulfonate transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|90111188|ref|NP_415454.4| putative alkanesulfonate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|157155333|ref|YP_001462155.1| alkanesulfonate transporter permease subunit [Escherichia coli
           E24377A]
 gi|157160456|ref|YP_001457774.1| alkanesulfonate transporter permease subunit [Escherichia coli HS]
 gi|170020664|ref|YP_001725618.1| alkanesulfonate transporter permease subunit [Escherichia coli ATCC
           8739]
 gi|170080592|ref|YP_001729912.1| alkanesulfonate ABC transporter membrane protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188495708|ref|ZP_03002978.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 53638]
 gi|191166966|ref|ZP_03028789.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B7A]
 gi|193064670|ref|ZP_03045749.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E22]
 gi|193071686|ref|ZP_03052588.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E110019]
 gi|194428405|ref|ZP_03060946.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B171]
 gi|194438699|ref|ZP_03070786.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 101-1]
 gi|218553521|ref|YP_002386434.1| alkanesulfonate transporter permease subunit [Escherichia coli
           IAI1]
 gi|218694409|ref|YP_002402076.1| alkanesulfonate transporter permease subunit [Escherichia coli
           55989]
 gi|238900192|ref|YP_002925988.1| alkanesulfonate transporter subunit [Escherichia coli BW2952]
 gi|253774037|ref|YP_003036868.1| alkanesulfonate transporter permease subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161048|ref|YP_003044156.1| alkanesulfonate transporter permease [Escherichia coli B str.
           REL606]
 gi|256018807|ref|ZP_05432672.1| alkanesulfonate transporter permease subunit [Shigella sp. D9]
 gi|256023364|ref|ZP_05437229.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           4_1_40B]
 gi|260843184|ref|YP_003220962.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260854226|ref|YP_003228117.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|293433231|ref|ZP_06661659.1| ssuC [Escherichia coli B088]
 gi|301022456|ref|ZP_07186335.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|307137564|ref|ZP_07496920.1| alkanesulfonate transporter permease subunit [Escherichia coli
           H736]
 gi|307311679|ref|ZP_07591319.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|312971065|ref|ZP_07785244.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1827-70]
 gi|332279885|ref|ZP_08392298.1| alkanesulfonate transporter subunit [Shigella sp. D9]
 gi|3915972|sp|P75851|SSUC_ECOLI RecName: Full=Putative aliphatic sulfonates transport permease
           protein ssuC
 gi|4583569|emb|CAB40392.1| putative aliphatic sulfonate transport membrane component
           [Escherichia coli]
 gi|73854969|gb|AAZ87676.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|85674791|dbj|BAA35689.2| alkanesulfonate transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|87081802|gb|AAC74020.2| putative alkanesulfonate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|157066136|gb|ABV05391.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli HS]
 gi|157077363|gb|ABV17071.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E24377A]
 gi|169755592|gb|ACA78291.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169888427|gb|ACB02134.1| alkanesulfonate transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188490907|gb|EDU66010.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 53638]
 gi|190902960|gb|EDV62686.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B7A]
 gi|192927727|gb|EDV82342.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E22]
 gi|192955010|gb|EDV85511.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli E110019]
 gi|194413620|gb|EDX29901.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli B171]
 gi|194422331|gb|EDX38331.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli 101-1]
 gi|218351141|emb|CAU96845.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360289|emb|CAQ97839.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|238859959|gb|ACR61957.1| alkanesulfonate transporter subunit [Escherichia coli BW2952]
 gi|242376749|emb|CAQ31462.1| ssuC, subunit of aliphatic sulfonate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325081|gb|ACT29683.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972949|gb|ACT38620.1| alkanesulfonate transporter subunit [Escherichia coli B str.
           REL606]
 gi|253977163|gb|ACT42833.1| alkanesulfonate transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752875|dbj|BAI24377.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|257758331|dbj|BAI29828.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260449920|gb|ACX40342.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|291324050|gb|EFE63472.1| ssuC [Escherichia coli B088]
 gi|299881219|gb|EFI89430.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|306908234|gb|EFN38733.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|309701210|emb|CBJ00510.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Escherichia coli ETEC H10407]
 gi|310336826|gb|EFQ01993.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1827-70]
 gi|315060219|gb|ADT74546.1| alkanesulfonate transporter subunit [Escherichia coli W]
 gi|315135582|dbj|BAJ42741.1| alkanesulfonate transporter permease subunit [Escherichia coli DH1]
 gi|315619130|gb|EFU99710.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 3431]
 gi|320202332|gb|EFW76903.1| Alkanesulfonates transport system permease protein [Escherichia
           coli EC4100B]
 gi|323157173|gb|EFZ43296.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli EPECa14]
 gi|323165408|gb|EFZ51195.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella sonnei 53G]
 gi|323175440|gb|EFZ61035.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1180]
 gi|323379221|gb|ADX51489.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|323938040|gb|EGB34302.1| inner membrane transport system [Escherichia coli E1520]
 gi|323942850|gb|EGB39015.1| inner membrane transport system [Escherichia coli E482]
 gi|323962926|gb|EGB58500.1| inner membrane transport system [Escherichia coli H489]
 gi|323973191|gb|EGB68383.1| inner membrane transport system [Escherichia coli TA007]
 gi|324117201|gb|EGC11109.1| inner membrane transport system [Escherichia coli E1167]
 gi|332092532|gb|EGI97605.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella boydii 5216-82]
 gi|332095894|gb|EGJ00901.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 155-74]
 gi|332102237|gb|EGJ05583.1| alkanesulfonate transporter subunit [Shigella sp. D9]
 gi|332342378|gb|AEE55712.1| aliphatic sulfonates transport permease protein SsuC [Escherichia
           coli UMNK88]
          Length = 263

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|282889665|ref|ZP_06298204.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500239|gb|EFB42519.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 552

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 14/191 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T   M    +++LL  F  A + A    + M+L P+  ++Q IP+       V
Sbjct: 50  LLFHTGITLKEMAGGFILALLVAFPLAWMMAFWESMRMILQPLFIVIQCIPMFALAPLMV 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F   Y         A +        + +T ++YQ L + P+ L +  ++   + WQ F
Sbjct: 110 MWFGWSYT--------AIVLPTALMIFFPLTMNIYQGLLSTPQHLADYFKTLNATPWQFF 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + L +P S+P +     +S +      +A E     +      G+G  +  + +E DL  
Sbjct: 162 FKLQLPASLPHIFAGFRISAAIAGIAAIAGEWAGGQN------GLGMLMLQSRRETDLEI 215

Query: 241 ILYAMLTMLGV 251
              A+  +  +
Sbjct: 216 TFGALFCLTFI 226



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +Q    +++   IT+  +    I+A ++  P+   + F   +   +QP   ++   P   
Sbjct: 44  WQKSDRLLFHTGITLKEMAGGFILALLVAFPLAWMMAFWESMRMILQPLFIVIQCIPMFA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL+V    + +    L  +L++ F     +  N+  G  + P    +   + + T W+
Sbjct: 104 LAPLMVMWFGWSYTAIVLPTALMIFF----PLTMNIYQGLLSTPQHLADYFKTLNATPWQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++  + LP   P+   G   +   A  A+I  E A   +      GLG  + +S  +   
Sbjct: 160 FFFKLQLPASLPHIFAGFRISAAIAGIAAIAGEWAGGQN------GLGMLMLQSRRETDL 213

Query: 553 PEVVLGVLIMCCFVLAL 569
                 +  +      L
Sbjct: 214 EITFGALFCLTFISSIL 230


>gi|92380885|dbj|BAE93387.1| putative ABC transporter subunit [Thiobacillus thioparus]
          Length = 240

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 75/210 (35%), Gaps = 4/210 (1%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            LG          L   +   V +++  +        A    +  I  +       +   
Sbjct: 15  ALGQFALQRFSWALGGVAILAVLWLIAGYMLSSNPRTAAYSTFGLIPTMQAFPEMWEAGK 74

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      + +R+ + ++ A +I +P+G+ +G     ++      Q +       + P+ V
Sbjct: 75  IQNASLASGYRLGMGMLFAILIGVPIGVLVGRVKWFAAYSNSPFQFIRMISPLAWMPIAV 134

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              S ++ +    +  L+     W +LF   AG +     + +VA +   +  +    II
Sbjct: 135 LVFSTWNGS----IIFLISIAAVWPVLFATAAGLAKVDPAWFKVARNLGASPVQMLTKII 190

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +P I     +G   A G AW   + +E   
Sbjct: 191 MPAIAFDVFSGIRLALGVAWIVLVPAEYLG 220



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 59/170 (34%), Gaps = 8/170 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
              +   P   +   +   +  +  R+   M+ ++L       L  + +           
Sbjct: 60  IPTMQAFPEMWEAGKIQNASLASGYRLGMGMLFAILIGVPIGVLVGRVKWFAAYSNSPFQ 119

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++ I  L ++   V+ F             + IF I  + VW + F+    L  +    
Sbjct: 120 FIRMISPLAWMPIAVLVFSTWNG--------SIIFLISIAAVWPVLFATAAGLAKVDPAW 171

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            +V+R+   S  Q    + +P     +   + +++   W  +V +E + V
Sbjct: 172 FKVARNLGASPVQMLTKIIMPAIAFDVFSGIRLALGVAWIVLVPAEYLGV 221


>gi|332885955|gb|EGK06199.1| hypothetical protein HMPREF9456_00073 [Dysgonomonas mossii DSM
           22836]
          Length = 253

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 90/227 (39%), Gaps = 11/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + ++ W+ +   +++         + + ++      ++     ++ R+   I I+  I +
Sbjct: 21  LFNVIWYILAACLSLKALPFPTE-VYSGYSKAFENGILDHAFASLRRIAYSIGISLGIAL 79

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+W+G+   ++S + P        P     P+++        +  + + L+++F    
Sbjct: 80  VLGVWMGYSKRVNSLLGPMIYFSYPIPKLALLPIIMVLFDLGETSKIVIVILIVVF---- 135

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++  +         +   V  SF  TG +  R+I LP I P   +    A G A +A  
Sbjct: 136 QLIITIRDAVKNISKENYYVLISFGATGLQKMRHITLPAILPEVFSSLRVALGIATSALF 195

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             E            GLG YI +S  +  + ++  G++++      L
Sbjct: 196 FIETFGTDK------GLGFYITDSQMRVDYVQMYFGIIVLSLIGFIL 236



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 97/235 (41%), Gaps = 16/235 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             + F ++  I+   L  ++    P ++        +   L  +A  +  R+  ++ ISL
Sbjct: 18  GFILFNVIWYILAACL-SLKALPFPTEVYSGYSKAFENGIL-DHAFASLRRIAYSIGISL 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V       S+R+  +L P++     IP L  L   +V F      K++   L  +F
Sbjct: 76  GIALVLGVWMGYSKRVNSLLGPMIYFSYPIPKLALLPIIMVLFDLGETSKIVIVILIVVF 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  ++  ++ NI ++   V  SF  +G QK  ++ +P  +P +  ++ +++
Sbjct: 136 --------QLIITIRDAVKNISKENYYVLISFGATGLQKMRHITLPAILPEVFSSLRVAL 187

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                  +A+  +   +T     G+G YI  +    D + + + ++ +  + F+ 
Sbjct: 188 G------IATSALFFIETFGTDKGLGFYITDSQMRVDYVQMYFGIIVLSLIGFIL 236


>gi|227508983|ref|ZP_03939032.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191565|gb|EEI71632.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 512

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 15/215 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            I  I                     L +++I+++     A  A   R    + +    I
Sbjct: 2   SITAITHFFTANAKFINALMEHVYLTLISLIIAIVIAIPLAVYARNHRIFAHIALGFTSI 61

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           MQ+IP L  L         L P   IG++ A I  +    +  +  + Y +L  I  +L 
Sbjct: 62  MQTIPSLAIL-------GILIPIVGIGSKPAIIALVIYGIL-PIYSNTYTALTTIDPNLT 113

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +  F L+ WQ+ + + +P S   ++  +  S          + +I  G       G+G
Sbjct: 114 EAAEVFGLTKWQRLFRIELPLSTDSILTGIKTSTVLIIGTATLAALIGAG-------GLG 166

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           ++I L I   +    L   +    +  ++  L+ R
Sbjct: 167 TFILLGIDRSNTALTLTGAIGSALLAVVFSWLITR 201



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +IIA +I IP+ ++       +     F  ++   P+     +++  V     
Sbjct: 24  VYLTLISLIIAIVIAIPLAVYARNHRIFAHIALGFTSIMQTIPSLAILGILIPIVGIGSK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  I      I  N     +    +  E A  F +T W+    I LP      
Sbjct: 84  PAIIALVIYGIL----PIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSTDSI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG  T+       + ++ +   G       GLG +I    ++ +    + G +      
Sbjct: 140 LTGIKTSTVLIIGTATLAALIGAG-------GLGTFILLGIDRSNTALTLTGAIGSALLA 192

Query: 567 LALNRFLWH 575
           +  +  +  
Sbjct: 193 VVFSWLITR 201


>gi|225551996|ref|ZP_03772936.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia sp. SV1]
 gi|225370994|gb|EEH00424.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia sp. SV1]
          Length = 299

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++++S++       L     R  + L PILD+MQ++P   +L   
Sbjct: 83  NLWEASMDTIAIIFVSVLVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +  ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TASAIFATIVFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +  
Sbjct: 195 LFQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVIIAIILDRIMQSIFIKFS 275



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 91/229 (39%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           + +   +C ++     + + +++    +  + + +W   + T+  + V ++++ I+ IP+
Sbjct: 50  LLFILTICLLSFVFLKKRLIFLILPGFFFILYFNLWEASMDTIAIIFVSVLVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIVF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILFQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIM 267


>gi|169632054|ref|YP_001705790.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter
           baumannii SDF]
 gi|169150846|emb|CAO99449.1| alkanesulfonate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii]
          Length = 254

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                S+ +    Q++   PA    PLV+                L+  G  + I  N  
Sbjct: 96  SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI----DETAKLFLVAVGVFFPIDINTY 151

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ ++ W+ ++ IILPG  P  + G   A G  W   IV+E  S 
Sbjct: 152 HGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS- 210

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   G+G     + E      V++G+L+        +  
Sbjct: 211 -----AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVL 248



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 14/248 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I +R+ P IF ++  V+     +  L   +    P  +V      L    L Q+   +  
Sbjct: 15  IGQRLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLLISGELWQHVKVSAG 74

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R L  + I      +   L   SR    +L   L ++++IP L  +   +++F       
Sbjct: 75  RALLGLFIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGID---- 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +     + +  + Y  + ++   L E+ +S+ LS WQ +  + +P +MP
Sbjct: 131 ----ETAKLFLVAVGVFFPIDINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMP 186

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    
Sbjct: 187 SILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYAL 240

Query: 251 VIFLYDQL 258
           +  L D L
Sbjct: 241 LGKLADVL 248


>gi|89070895|ref|ZP_01158130.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Oceanicola granulosus HTCC2516]
 gi|89043534|gb|EAR49745.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Oceanicola granulosus HTCC2516]
          Length = 345

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 95/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            LV+G+  +L   +Q       +V I  + +      +  + +   +L+A ++ +     
Sbjct: 120 FLVVGLFVLLTWILQRNWKTCLLVAIGFLFVLDQGYWEATAESLTLVLAACLMCMAIGVP 179

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 180 IGIAAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPAP 236

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  + + P  L E +R+F  +  Q  +   +P++ P ++  +  ++     
Sbjct: 237 -----IRLTYLGVSSTPPALLEAARAFGATPRQTLFKAELPYAFPQIMAGLNQTIMLSLS 291

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   +      +   ++ V  + D++L
Sbjct: 292 MVVIAALV-------GADGLGVPVIRALNSVNTSLGFESGFVIVVVAIMLDRML 338



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 113/345 (32%), Gaps = 23/345 (6%)

Query: 241 ILYAMLTMLGVIF-----LYDQLLF-RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN- 293
           I  A++ + G I      L D +L+  P +VW   +   R TG       V     +   
Sbjct: 5   IGEAIVAIFGAILWIVQALVDFVLWLGPALVWFLGWLPRRLTGRTDEQLPVGDTAERGFD 64

Query: 294 FLRFIGYSSWNFFSPLSN-----NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
           ++R    +  + F+ ++       +  L R  G                   ++   +  
Sbjct: 65  YVREGAAAFLDGFADVTEFIIDFILALLTRPPGENWLAGRGFEPTFPWWTETTHAFLVVG 124

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V+    +   W++   +   F +            ++  V+   ++   I +P+GI  
Sbjct: 125 LFVLLTWILQRNWKTCLLVAIGFLFVLDQGYWEATAESLTLVLAACLMCMAIGVPIGIAA 184

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
             RP + + ++P   L+   P  V+    +       +   +   + ++      I    
Sbjct: 185 AHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIRL-T 240

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G S+ P    E A +F  T  +      LP  FP  + G       + +  +++ +  
Sbjct: 241 YLGVSSTPPALLEAARAFGATPRQTLFKAELPYAFPQIMAGLNQTIMLSLSMVVIAALVG 300

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    GLG  +  +    +         ++    + L+R L
Sbjct: 301 -------ADGLGVPVIRALNSVNTSLGFESGFVIVVVAIMLDRML 338


>gi|325673694|ref|ZP_08153385.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|325555715|gb|EGD25386.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 284

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 22/260 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--------TVPRDIVDIVPITLDVH 59
           P +  +R  P    L   +LV  ++         T          P  + D         
Sbjct: 22  PAYRRQRSRPAWLSLPLRLLVPAVLVAGWWIGSATGLISEAVLASPVKVWDAFAELYSTG 81

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  ++  +  R    +    +   V   L+  S     ++   + I +++P L  +   
Sbjct: 82  QLVDFSLASLQRAAIGVFFGTVIGLVLGVLSGLSTLGEELIDSTMQINRAVPFLALVPLF 141

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           E   +  I  + V  M    Y  + N+ R + E +R F L+GW+ 
Sbjct: 142 IAWFGID--------ETFKVVLIAVATVAPMYAYTYLGVRNVDRKMVEAARGFGLTGWRL 193

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                +P ++PG++  + + +S     ++A+E +          GIG  + LA +     
Sbjct: 194 VAEAILPAALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTD 247

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            ++  ++    +  ++D ++
Sbjct: 248 YMVLCVVLYAALGLVFDAIV 267



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 81/270 (30%), Gaps = 21/270 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DV 376
           T    R      +L L     V  +L   W+       I  A  +    V     +    
Sbjct: 21  TPAYRRQRSRPAWLSLPLRLLVPAVLVAGWWIGSATGLISEAVLASPVKVWDAFAELYST 80

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R  + +   ++I + +G+  G        I    Q+  A P     PL
Sbjct: 81  GQLVDFSLASLQRAAIGVFFGTVIGLVLGVLSGLSTLGEELIDSTMQINRAVPFLALVPL 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++           +  +L+   T   +      G         E A  F +TGWR    
Sbjct: 141 FIAWFGI----DETFKVVLIAVATVAPMYAYTYLGVRNVDRKMVEAARGFGLTGWRLVAE 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ILP   P  + G       +    I +E            G+G  +  + E      +V
Sbjct: 197 AILPAALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTDYMV 250

Query: 557 LGVLIMCCFVLALNRFL---------WHPL 577
           L V++     L  +  +         W  L
Sbjct: 251 LCVVLYAALGLVFDAIVRVVERFAMPWRRL 280


>gi|253997820|ref|YP_003049883.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|253984499|gb|ACT49356.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
          Length = 264

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R L+ + I   F  V     A SR +   + P+  I++ +P++G +    ++  
Sbjct: 67  LAASLQRALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLG 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N         + A +F +  S  + +  + Y+SL  +     EV    +LS  Q+F ++ 
Sbjct: 127 NG--------DTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHIL 178

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   +  +++  W   + SE++          G+G+ +  A     +  ++  
Sbjct: 179 LPAALPNIFTGVSFALAMAWLSTIGSEILFNAGA-----GLGNLMMNAEMASRMDILVVV 233

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  V +L   +L+R
Sbjct: 234 TILIGVVGYLLTFVLYR 250



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 9/192 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +  + I     + +G+ +     I + + P   +L   P     P+    +  
Sbjct: 68  AASLQRALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLG- 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N +     ++     + ++             F EV +   ++  + +R+I+LP   
Sbjct: 127 ---NGDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   AW ++I SE+           GLG  +  +        +V+  +++ 
Sbjct: 184 PNIFTGVSFALAMAWLSTIGSEILFNAG-----AGLGNLMMNAEMASRMDILVVVTILIG 238

Query: 564 CFVLALNRFLWH 575
                L   L+ 
Sbjct: 239 VVGYLLTFVLYR 250


>gi|73663305|ref|YP_302086.1| glycine/betaine ABC transporter periplasmic protein [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495820|dbj|BAE19141.1| putative periplasmic glycine betaine choline-binding protein of an
           ABC-type transport system [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 505

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ L          K+R+L  V++ I  ++Q+IP L  L  
Sbjct: 13  GELLTTIFEHIQISFIALLIAALIGVPLGIALTKTRKLSEVIMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ A+ A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPLFGIG--------KVPAVIALVVYALLPILRNTYTGINEVDPSLVEAAKGIGMKPGR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLSKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              D   IL   +    +  L+D L+ R M   S K
Sbjct: 173 DRNDTSLILIGAIPAALLAILFD-LVLRYMQNMSYK 207



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA++I +P+GI +     +S  I   A +L   P+     L++       +   +
Sbjct: 27  FIALLIAALIGVPLGIALTKTRKLSEVIMNIAAVLQTIPSLALLGLMIPLFGIGKVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G +       E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGINEVDPSLVEAAKGIGMKPGRRLSKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDTSLILIGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LVLRYMQNMSYKKL 209


>gi|322411670|gb|EFY02578.1| ABC-type glycine betaine transport system protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 508

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   I+   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLIMIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 13/195 (6%)

Query: 381 WLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           WL  +   +   ++ ++IA +I +P+   +      S  +     +    P+     L +
Sbjct: 15  WLAALGEHLQISLLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI 74

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L     L +  IF     IL N I G +       E  ++F +T W   +   
Sbjct: 75  PLMGIGTLPAVTALVIYAIF----PILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFE 130

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++G  T+       + ++ +   G       GLG++I    ++ +   +++G
Sbjct: 131 IPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLIMIG 183

Query: 559 VLIMCCFVLALNRFL 573
            +      +  N  L
Sbjct: 184 AISSALLAIIFNSLL 198


>gi|289423719|ref|ZP_06425517.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Peptostreptococcus anaerobius 653-L]
 gi|289155883|gb|EFD04550.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Peptostreptococcus anaerobius 653-L]
          Length = 574

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 87/208 (41%), Gaps = 15/208 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +  +L           + A+V+ +L       +  K++ +  +++ I  ++Q+IP L
Sbjct: 5   LSENGTNLLIKIGEHLTISMVALVLGVLVAVPLGVVITKNKMVAKIVMSIASVLQTIPSL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V  F           ++ AI AIF   +  +  +    + ++  ++ + ++   
Sbjct: 65  ALLAIMVPLFGVG--------KVPAIIAIFIYSLLPILRNTVLGMMSVDDNVLDAAKGMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +  + P ++  + +S      +V+A   +    + +   G+G +I   +
Sbjct: 117 MTFFQIIKDIQIKLAAPVIMSGVRLSA----VYVIAWTTLA---SYVGAGGLGDFIFTGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              ++  I+   + +  +  + D +L R
Sbjct: 170 TLFNVPMIILGAVPVTIMALIMDLVLSR 197



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 72/189 (38%), Gaps = 16/189 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V +++  ++ +P+G+ I     ++  +   A +L   P+     ++V           +
Sbjct: 24  MVALVLGVLVAVPLGVVITKNKMVAKIVMSIASVLQTIPSLALLAIMVPLFGVG----KV 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N + G  +  ++  + A    +T ++  + I +    P  ++G 
Sbjct: 80  PAIIAIFIYSLLPILRNTVLGMMSVDDNVLDAAKGMGMTFFQIIKDIQIKLAAPVIMSGV 139

Query: 511 ITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             +     AW              ++   GLG +I       + P ++LG + +    L 
Sbjct: 140 RLSAVYVIAWTTL---------ASYVGAGGLGDFIFTGLTLFNVPMIILGAVPVTIMALI 190

Query: 569 LNRFLWHPL 577
           ++  +   L
Sbjct: 191 MD-LVLSRL 198


>gi|212213301|ref|YP_002304237.1| glycine betaine transport system permease protein [Coxiella
           burnetii CbuG_Q212]
 gi|212011711|gb|ACJ19092.1| glycine betaine transport system permease protein [Coxiella
           burnetii CbuG_Q212]
          Length = 526

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 85/230 (36%), Gaps = 19/230 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  +  I   +L    L ++   +    LSA +++++      T+      L   ++
Sbjct: 1   MSTPTGMFLINNASLLGVKLLEHLYLS----LSATLLAIIIGIPLGTVILNRPALKNTVL 56

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  I Q+IP L  L F + +    +           I  +    +  +  + +  L  +
Sbjct: 57  SVTSIFQTIPSLALLAFLIPFIGIGF--------KPTIVTLTLYALLPIIRNTFMGLTGV 108

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +  E +R+   + WQ+   + +P ++P +V  +  + +        +  I  G     
Sbjct: 109 PPESIEAARAMGFTRWQRLRLVELPLALPIIVAGIRTATAMTIGITTIAAFIGAG----- 163

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             G+G +I   +   D   IL   +    +    + ++       SN+ R
Sbjct: 164 --GLGDFITQGLSLNDPRLILLGAIPTALLAIALNFIIAYIESALSNRQR 211



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +   ++A II IP+G  I  RP + + +     +    P+      ++  +     
Sbjct: 24  LYLSLSATLLAIIIGIPLGTVILNRPALKNTVLSVTSIFQTIPSLALLAFLIPFIGIGFK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      I+ N   G +  P +  E A +   T W+  R + LP   P  
Sbjct: 84  PTIVTLTLYALL----PIIRNTFMGLTGVPPESIEAARAMGFTRWQRLRLVELPLALPII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G  TA       + ++     G       GLG +I +         ++LG +      
Sbjct: 140 VAGIRTATAMTIGITTIAAFIGAG-------GLGDFITQGLSLNDPRLILLGAIPTALLA 192

Query: 567 LALN 570
           +ALN
Sbjct: 193 IALN 196


>gi|251794792|ref|YP_003009523.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247542418|gb|ACS99436.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 289

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 13/176 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    +   + P  Q++   P     PL +    +   +      LL+  G  + +  N
Sbjct: 118 VGMFSKVEEIVDPTVQMIRTVPLLAITPLFILWFGFGETSK----ILLIALGAFFPLYVN 173

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G     +   +VA             ++LP   P  + G   +   AW   +V+E+ 
Sbjct: 174 TFLGVRNVDSKLFDVARVLEFKKVNQMIRLVLPAAMPNVLLGLRLSISIAWLVLVVAELM 233

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                     G+G  I ++        V +G+++        +   R L   L  +
Sbjct: 234 G------ADRGIGYLIQDARSFMRTEVVFIGIILFAAVGKLTDSLVRVLERRLLKW 283



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 91/232 (39%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I+      +    L ++   + LR L   ++      ++        ++  ++ P
Sbjct: 71  PAPSFIIKEFYEMIVSGELFRHLEISVLRALIGFLLGGSLGLLFGLTVGMFSKVEEIVDP 130

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +++++P+L      +++F      K++   L A F         +  + +  + N+ 
Sbjct: 131 TVQMIRTVPLLAITPLFILWFGFGETSKILLIALGAFF--------PLYVNTFLGVRNVD 182

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L +V+R        +   L +P +MP ++  + +S+S  W  +V +E++         
Sbjct: 183 SKLFDVARVLEFKKVNQMIRLVLPAAMPNVLLGLRLSISIAWLVLVVAELMG------AD 236

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
            GIG  I  A        +   ++    V  L D L   L R ++ W + ++
Sbjct: 237 RGIGYLIQDARSFMRTEVVFIGIILFAAVGKLTDSLVRVLERRLLKWRDSYK 288


>gi|327253725|gb|EGE65354.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli STEC_7v]
          Length = 263

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  ++           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|323185357|gb|EFZ70721.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 1357]
          Length = 259

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 10  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 69

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 70  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 121

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 122 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 181

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 182 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 235

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 236 VSAQLLERLWLRWNPAYHLKEAT 258



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 7   RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 66

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 67  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 122

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 123 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 182

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 183 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 236

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 237 SAQLLERLWLRWNPAYHLKE 256


>gi|170693806|ref|ZP_02884963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141224|gb|EDT09395.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 287

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 99/259 (38%), Gaps = 21/259 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHS 60
            P  + R+    + L  +VL   ++ +   G +   +   I+       D          
Sbjct: 26  SPRRNARLRALAWRLAPWVLPAVLLALWATGCERGWIAPQILPPPERVFDTFVELARSGD 85

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+L       L  F        SR     ++P  + +  IP+LG+L F +
Sbjct: 86  LASNTLISLQRVLVGFAAGTLLGFALGAALGLSRTFEAYVLPSFNALVQIPVLGWLPFLL 145

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +      P K I         I  + +  +T S  Q     P  L+EV+R F    WQ+ 
Sbjct: 146 LLVGVGEPLKYI--------LIAHAALVPVTLSTLQGFRQTPASLDEVARVFAYKRWQRI 197

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            YL VP ++P L   + ++ +  W  +V  E++   +      G+G  I    +   L  
Sbjct: 198 VYLVVPAAVPTLATGVRLAFTKAWLALVVVELVASSE------GLGYLIVYGRQLFQLDL 251

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++ +++ +  + +  ++ L
Sbjct: 252 VMASVVVVGAIGYAMNRSL 270



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 22/259 (8%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNH-------FT 372
              P    +  +  R        W      +A+        W +   +            
Sbjct: 20  RELPAASPRRNARLRALAWRLAPWVLPAVLLALWATGCERGWIAPQILPPPERVFDTFVE 79

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +     I++ RV+V     +++   +G  +G      + + P    L   P   
Sbjct: 80  LARSGDLASNTLISLQRVLVGFAAGTLLGFALGAALGLSRTFEAYVLPSFNALVQIPVLG 139

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P ++  V            +L+       +  + + G    P    EVA  F    W+
Sbjct: 140 WLPFLLLLVGVG----EPLKYILIAHAALVPVTLSTLQGFRQTPASLDEVARVFAYKRWQ 195

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              Y+++P   P   TG   A   AW A +V E+ +       + GLG  I    +    
Sbjct: 196 RIVYLVVPAAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLFQL 249

Query: 553 PEVVLGVLIMCCFVLALNR 571
             V+  V+++     A+NR
Sbjct: 250 DLVMASVVVVGAIGYAMNR 268


>gi|167749031|ref|ZP_02421158.1| hypothetical protein ANACAC_03812 [Anaerostipes caccae DSM 14662]
 gi|317472570|ref|ZP_07931889.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|167651653|gb|EDR95782.1| hypothetical protein ANACAC_03812 [Anaerostipes caccae DSM 14662]
 gi|316899979|gb|EFV21974.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 525

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 74/185 (40%), Gaps = 15/185 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  S+L       L +  + L   ++ + +++Q+IP +  L  ++             
Sbjct: 27  IAVGCSILVGVPLGILISYVKNLNKPVLGVANVVQAIPSMALLGLSIPLLGIG------- 79

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L A+  +    +  +  + +  + +I  ++ E ++   L+  Q  + + +P ++P ++
Sbjct: 80  -TLPAVVMVIIYSLLPIIKNTFTGINSISPEMVEAAKGIGLTKAQVLFKIKIPLALPIIM 138

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S       V A  ++ +    I   G+G  +   I+  +   IL   +    +  
Sbjct: 139 AGVRIS------AVTAVGLMTMAAF-IGAGGLGYLVFSGIRTVNNAQILAGAIPSCILAL 191

Query: 254 LYDQL 258
           L D L
Sbjct: 192 LVDYL 196



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  + ++ +P+GI I +  +++  +   A ++ A P+     L +  +    L    
Sbjct: 26  AIAVGCSILVGVPLGILISYVKNLNKPVLGVANVVQAIPSMALLGLSIPLLGIGTL---- 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++I  +   I+ N   G ++   +  E A    +T  +    I +P   P  + G 
Sbjct: 82  PAVVMVIIYSLLPIIKNTFTGINSISPEMVEAAKGIGLTKAQVLFKIKIPLALPIIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +       +  +++ G +  C   L ++
Sbjct: 142 RISAVTAVGLMTMAAFIGAG-------GLGYLVFSGIRTVNNAQILAGAIPSCILALLVD 194

Query: 571 RF 572
             
Sbjct: 195 YL 196


>gi|111021922|ref|YP_704894.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110821452|gb|ABG96736.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 285

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 12/275 (4%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             +     +P +  +    R +  +       F +L     +  +  +            
Sbjct: 7   APAPARSVAPEAPRLGVADRQIRRLGLRKAFPFSRLAGVLLLLAVWAVGSLTGFIDARKL 66

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            A  ++           +L    L   ++ R  +      +I   + +  G      + I
Sbjct: 67  SAPWTVVTTAVELISTGILQEHVLA--SLSRAAIGFAFGVVIGTALAVVAGLTRSGDALI 124

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
               QL  A P     PL++  +         +  +++  G   ++        ++  N 
Sbjct: 125 DGPIQLKRAIPTLGLIPLLILWLGIGET----FKIVIIALGVVVHMYIQTHNSLTSIDNR 180

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           + E+A    ++   + R ++LPG  P +  G   +  GAW   IV E  +        TG
Sbjct: 181 YVELAEVLGLSRATFIRKVVLPGAMPGFFLGLRLSVTGAWLTLIVVEGIN------AVTG 234

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG  +  +   G    +++G+ +   F L  +  L
Sbjct: 235 LGKMMYNAQNYGQSDVILVGLAVYGIFGLLSDSVL 269



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            ++ + P  +V      +    L ++   +  R        ++     A +A  +R    
Sbjct: 63  ARKLSAPWTVVTTAVELISTGILQEHVLASLSRAAIGFAFGVVIGTALAVVAGLTRSGDA 122

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++   + + ++IP LG +   +++            E   I  I    V +M    + SL
Sbjct: 123 LIDGPIQLKRAIPTLGLIPLLILWLGIG--------ETFKIVIIALGVVVHMYIQTHNSL 174

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +I     E++    LS       + +P +MPG    + +S++G W  ++  E I     
Sbjct: 175 TSIDNRYVELAEVLGLSRATFIRKVVLPGAMPGFFLGLRLSVTGAWLTLIVVEGI----- 229

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              + G+G  +  A        IL  +        L D +L
Sbjct: 230 -NAVTGLGKMMYNAQNYGQSDVILVGLAVYGIFGLLSDSVL 269


>gi|288916344|ref|ZP_06410723.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288352323|gb|EFC86521.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 317

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 78/264 (29%), Gaps = 17/264 (6%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV----VCGVAIGIAWQSIGY 366
                L R     +         +        +  ++W+      +    +    + +  
Sbjct: 47  APAPGLVRPRSARKRGHGRGLTLVLRALLPLALFGLWWWGTETGRISANVLVSPPEVVRT 106

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             +  +   + + +W+      R     +I   + +  G   G        +    Q+L 
Sbjct: 107 FGDLVSEDHLFHQLWVSLSLSLR---GALIGGSLGLLFGAVAGLWRIGEELLDATMQMLR 163

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL +  +            LL+   T + +  N   G         E    F
Sbjct: 164 TIPFLAVVPLFIVWLGIGDTPK----VLLISLATLFPMYLNTYNGVRNVDRRVIEAMDVF 219

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + G R    +I+P   P  +TG     G +  A I +E  +       + GLG  + ++
Sbjct: 220 GLRGARLVAKVIIPLALPSILTGLRFCLGVSVLALIAAEQIN------SSAGLGYLMYQA 273

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
                   +V+ + I     L  +
Sbjct: 274 QSLQQVDILVVVLAIYAILGLLSD 297



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 84/222 (37%), Gaps = 15/222 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++V      +    L      +    L   +I      ++  +A   R    +L 
Sbjct: 97  LVSPPEVVRTFGDLVSEDHLFHQLWVSLSLSLRGALIGGSLGLLFGAVAGLWRIGEELLD 156

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +V+       KV+   LA +F         M  + Y  + N+
Sbjct: 157 ATMQMLRTIPFLAVVPLFIVWLGIGDTPKVLLISLATLF--------PMYLNTYNGVRNV 208

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R + E    F L G +    + +P ++P ++  +   +      ++A+E I        
Sbjct: 209 DRRVIEAMDVFGLRGARLVAKVIIPLALPSILTGLRFCLGVSVLALIAAEQINSSA---- 264

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             G+G  +  A   Q +  IL  +L +  ++ L   L+ R +
Sbjct: 265 --GLGYLMYQAQSLQQVD-ILVVVLAIYAILGLLSDLVVRVL 303


>gi|194434390|ref|ZP_03066653.1| putative sulfonate ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|300921026|ref|ZP_07137413.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|331651956|ref|ZP_08352975.1| putative transport system permease protein [Escherichia coli M718]
 gi|194417374|gb|EDX33480.1| putative sulfonate ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|300412017|gb|EFJ95327.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|331050234|gb|EGI22292.1| putative transport system permease protein [Escherichia coli M718]
          Length = 264

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|256379428|ref|YP_003103088.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255923731|gb|ACU39242.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 298

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 90/278 (32%), Gaps = 18/278 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            V     +L    +    N+ +    + ++  L      +V     G +       +   
Sbjct: 19  IVATPFDSLDWPGWLGLINWEEALRVRALTRGLLGAAGFLVIWELFGRSGLVPQEYLPPP 78

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASII--------WIPVGIWIGFRPHISSKIQPFAQ 423
           +   V  +  LG  T  R VV  ++A +I         +P G+ +G    +    +   +
Sbjct: 79  SVVAVELLALLGDETFLRDVVATVLALLISVLLSVGIAVPAGLVLGSVAPVRHATRAVVE 138

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L   P+    PL +  +             L ++   W ILFN I           + A
Sbjct: 139 FLRPIPSVALIPLAIVVLGLGP----EMKIALAVYAAVWPILFNTIYALDELDPLLVDTA 194

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             F  +  R    + LP   P+  TG   +        +  E+ + G       G+G ++
Sbjct: 195 RVFGASRLRVLLSVALPSALPFVFTGIRLSATTCLVVLVSVEMLAGG-----AAGIGEFV 249

Query: 544 AESTE-KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
            ++    G    V+ G ++       +N  L      +
Sbjct: 250 MDARSGAGRMDLVLAGTVVAGVLGYLVNEGLERAQRRW 287



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 98/260 (37%), Gaps = 15/260 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASR 67
               R +   +     F+++  +        QE   P  +V +  + L    +  +    
Sbjct: 41  ALRVRALTRGLLGAAGFLVIWELFGRSGLVPQEYLPPPSVVAVELLALLGDETFLRDVVA 100

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L +L ++++S+        +      +      +++ ++ IP +  +   +V      
Sbjct: 101 TVLALLISVLLSVGIAVPAGLVLGSVAPVRHATRAVVEFLRPIPSVALIPLAIVVLG--- 157

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +G E+  I     + VW + F+   +L  +   L + +R F  S  +    + +P 
Sbjct: 158 ----LGPEM-KIALAVYAAVWPILFNTIYALDELDPLLVDTARVFGASRLRVLLSVALPS 212

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK-EQDLLAILYAML 246
           ++P +   + +S +     +V+ EM+  G       GIG ++  A      +  +L   +
Sbjct: 213 ALPFVFTGIRLSATTCLVVLVSVEMLAGGAA-----GIGEFVMDARSGAGRMDLVLAGTV 267

Query: 247 TMLGVIFLYDQLLFRPMIVW 266
               + +L ++ L R    W
Sbjct: 268 VAGVLGYLVNEGLERAQRRW 287


>gi|118586955|ref|ZP_01544387.1| ABC-type aliphatic sulfonate transport system, permease component
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432577|gb|EAV39311.1| ABC-type aliphatic sulfonate transport system, permease component
           [Oenococcus oeni ATCC BAA-1163]
          Length = 251

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 11/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQS-IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++ I+ F V  G+A G    +    +++ +       +     I++FR ++  II   I 
Sbjct: 13  IIVIWQFIVTAGIASGKLLPAPSDILLDAWKLFKSGELQKNIGISLFRALLGFIIGGGIG 72

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +G+  G             Q+L   P     PL++  +     +       L+  G  
Sbjct: 73  FILGVLNGIFKVCRLAFDNTIQMLRNIPHLALIPLIILVIGIGEPSK----IFLVSVGCM 128

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N   G ++      E+  S+ ++  + +  II PG  P  + G   A G  W   
Sbjct: 129 FPMYINTYHGVTSIDKGLVEMGRSYGLSNSQVFFKIIFPGALPTILMGVRYALGVMWTTL 188

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           IV+E  +       ++G+G    E+ +      V+L +LI   F    +
Sbjct: 189 IVAETVA------TSSGIGYMANEAEQFTDMSTVILCILIYALFGKLSD 231



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 18/250 (7%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++   I        +    P DI+           L +    +  R L   +I   
Sbjct: 11  VGIIVIWQFIVTAGIASGKLLPAPSDILLDAWKLFKSGELQKNIGISLFRALLGFIIGGG 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+   L    +   +     + ++++IP L  +   ++      P K        IF 
Sbjct: 71  IGFILGVLNGIFKVCRLAFDNTIQMLRNIPHLALIPLIILVIGIGEPSK--------IFL 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ M  + Y  + +I + L E+ RS+ LS  Q F+ +  P ++P ++  +  ++ 
Sbjct: 123 VSVGCMFPMYINTYHGVTSIDKGLVEMGRSYGLSNSQVFFKIIFPGALPTILMGVRYALG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  ++ +E +          GIG     A +  D+  ++  +L       L D    L
Sbjct: 183 VMWTTLIVAETVATSS------GIGYMANEAEQFTDMSTVILCILIYALFGKLSDFIAKL 236

Query: 259 LFRPMIVWSN 268
           L    +VW N
Sbjct: 237 LEDTFLVWQN 246


>gi|209883528|ref|YP_002287385.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209871724|gb|ACI91520.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 292

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 92/243 (37%), Gaps = 10/243 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF ++  ++   +         +       V     ++   +L +    +   +L     
Sbjct: 46  IFVVVLLIIGWQLYGKWTDNDLQFPTFTATVSAFVDSVTRGTLVEQFLNSLRILLMGYAA 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        LA  +R    +L  +      +P +  L   +++F             + 
Sbjct: 106 GVAIATATTVLAVSTRIGTDILETLNAAFSPLPAIALLPLAMLWFGLGVG--------SL 157

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F +  S +W +  +M+    ++   L  V  ++ L G      + +P + P ++  + +
Sbjct: 158 LFVLIHSVLWPVALNMHGGFRSVSTTLRMVGANYGLRGLPYVARILIPAAFPSILSGLKI 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             + GW   +A+E++    +     G+G +I       ++ A+   +L ++G+  L + L
Sbjct: 218 GWAFGWRTEIAAELVFGASS--GDGGLGWFIFENKNNLEIPAVFAGLLAVIGLGLLVENL 275

Query: 259 LFR 261
           +FR
Sbjct: 276 VFR 278



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 6/199 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++  +++       I     +        +  ++      +  PA    PL
Sbjct: 86  GTLVEQFLNSLRILLMGYAAGVAIATATTVLAVSTRIGTDILETLNAAFSPLPAIALLPL 145

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  ++I    W +  N+  G  +     + V +++ + G  +   
Sbjct: 146 AMLWFGLGVGS----LLFVLIHSVLWPVALNMHGGFRSVSTTLRMVGANYGLRGLPYVAR 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P  FP  ++G        W   I +E+           GLG +I E+      P V 
Sbjct: 202 ILIPAAFPSILSGLKIGWAFGWRTEIAAELVFGASS--GDGGLGWFIFENKNNLEIPAVF 259

Query: 557 LGVLIMCCFVLALNRFLWH 575
            G+L +    L +   ++ 
Sbjct: 260 AGLLAVIGLGLLVENLVFR 278


>gi|319780590|ref|YP_004140066.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166478|gb|ADV10016.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 258

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 10/196 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    ++  R +    I   I   +G+  G             Q++   P     PL
Sbjct: 55  GELIRNIGVSTARALAGFAIGGSIGFALGLANGLSTLSRGLTDTTLQMIRNIPHLALIPL 114

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + I  N + G  +      E+   + +     +  
Sbjct: 115 VILWFGI----DEEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEMGRVYGMDRRALFFR 170

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P    G   A G  W   IV+E  S       ++GLG    ++ E      VV
Sbjct: 171 VILPGALPAIFVGLRYALGIMWLTLIVAETIS------ASSGLGYMAMQAREFLLIDVVV 224

Query: 557 LGVLIMCCFVLALNRF 572
           L +LI        +  
Sbjct: 225 LSILIYALLGKLADSL 240



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 21/268 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHG----IQETTVPRDIVDIVPITLDVHSLPQYAS 66
            S R+  N    L   L+I    I              P  + +          L +   
Sbjct: 3   FSTRLHSNAIGWLLPALIIAGWEIASRAGVMPANVLPAPSAVAEAFWRLTLSGELIRNIG 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T R L+   I     F        S     +    L ++++IP L  +   +++F   
Sbjct: 63  VSTARALAGFAIGGSIGFALGLANGLSTLSRGLTDTTLQMIRNIPHLALIPLVILWFGID 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E A +F +     + +  +    + ++   L E+ R + +     F+ + +P
Sbjct: 123 --------EEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEMGRVYGMDRRALFFRVILP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +   +  ++   W  ++ +E I          G+G     A +   +  ++ ++L
Sbjct: 175 GALPAIFVGLRYALGIMWLTLIVAETISASS------GLGYMAMQAREFLLIDVVVLSIL 228

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKFR 271
               +  L D   +LL R  + W   F+
Sbjct: 229 IYALLGKLADSLARLLERLSLGWHPAFQ 256


>gi|161831505|ref|YP_001596136.1| quaternary amine ABC transporter periplasmic substrate-binding
           protein [Coxiella burnetii RSA 331]
 gi|215918906|ref|NP_819223.2| quaternary amine ABC transporter permease/periplasmic amine-binding
           protein [Coxiella burnetii RSA 493]
 gi|161763372|gb|ABX79014.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein [Coxiella
           burnetii RSA 331]
 gi|206583791|gb|AAO89737.2| glycine betaine transport system permease protein [Coxiella
           burnetii RSA 493]
          Length = 526

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 81/218 (37%), Gaps = 19/218 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  +  I   +L    L ++   +    LSA +++++      T+      L   ++
Sbjct: 1   MSTPTGMFLINNASLLGVKLLEHLYLS----LSATLLAIIIGIPLGTVILNRPALKNTVL 56

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  I Q+IP L  L F + +    +           I  +    +  +  + +  L  +
Sbjct: 57  SVTSIFQTIPSLALLAFLIPFIGIGF--------KPTIVTLTLYALLPIIRNTFMGLTGV 108

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P +  E +R+   + WQ+   + +P ++P +V  +  + +        +  I  G     
Sbjct: 109 PPESVEAARAMGFTRWQRLRLVELPLALPIIVAGIRTATAMTIGITTIAAFIGAG----- 163

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G +I   +   D   IL   +    +    + ++
Sbjct: 164 --GLGDFITQGLSLNDPRLILLGAIPTALLAIALNFII 199



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +   ++A II IP+G  I  RP + + +     +    P+      ++  +     
Sbjct: 24  LYLSLSATLLAIIIGIPLGTVILNRPALKNTVLSVTSIFQTIPSLALLAFLIPFIGIGFK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      I+ N   G +  P +  E A +   T W+  R + LP   P  
Sbjct: 84  PTIVTLTLYALL----PIIRNTFMGLTGVPPESVEAARAMGFTRWQRLRLVELPLALPII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G  TA       + ++     G       GLG +I +         ++LG +      
Sbjct: 140 VAGIRTATAMTIGITTIAAFIGAG-------GLGDFITQGLSLNDPRLILLGAIPTALLA 192

Query: 567 LALN 570
           +ALN
Sbjct: 193 IALN 196


>gi|319401200|gb|EFV89415.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis FRI909]
          Length = 504

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A+ I+ L     A L  K+++L  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLFSTIIEHIQLSFIALFIATLIAVPLAILLTKTKKLSEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------RLPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  ++D  + R M   S K
Sbjct: 173 DRNNSALILIGAIPAALLAIIFD-FILRYMERLSYK 207



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA++I +P+ I +     +S  +   A +L   P+     L++       L   +
Sbjct: 27  FIALFIATLIAVPLAILLTKTKKLSEIVMNIAAVLQTIPSLALLGLMIPIFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPLRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNSALILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
            F+   +     + L
Sbjct: 196 -FILRYMERLSYKKL 209


>gi|323967181|gb|EGB62605.1| inner membrane transport system [Escherichia coli M863]
          Length = 264

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  ++           L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|266622872|ref|ZP_06115807.1| taurine uptake ABC transporter, permease protein [Clostridium
           hathewayi DSM 13479]
 gi|288865367|gb|EFC97665.1| taurine uptake ABC transporter, permease protein [Clostridium
           hathewayi DSM 13479]
          Length = 261

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 10/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I     ++ RV++   + S+  + +G+ +G      +   P  + +   P   + P+ 
Sbjct: 61  SLIIHMLSSLRRVLIGFCLGSLAGVILGLLMGRYLLARAIFNPIFRFIRPIPPIAWIPIS 120

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +                L+          N + GA     +    A        + +  +
Sbjct: 121 IIWFGLG----EEAKIFLIFLAAFANTTLNAMTGAMNVDPEVVNAARMLGAKERQIFTTV 176

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I+P   P    G       AW + + +E+           GLG  I    +  +  +++ 
Sbjct: 177 IIPASVPAIFAGLQVGISSAWASVVAAEMIK------AENGLGWIIQAGMDNNNMTQILA 230

Query: 558 GVLIMCCFVLALNRFLWH 575
           G++++      L   +  
Sbjct: 231 GIIMIGVVGFLLAYIMRK 248



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL  +   +  R+L    +  L   +   L  +      +  PI   ++ IP + ++  +
Sbjct: 61  SLIIHMLSSLRRVLIGFCLGSLAGVILGLLMGRYLLARAIFNPIFRFIRPIPPIAWIPIS 120

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E A IF IF +   N T +      N+  ++   +R       Q 
Sbjct: 121 IIWFGLG--------EEAKIFLIFLAAFANTTLNAMTGAMNVDPEVVNAARMLGAKERQI 172

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P S+P +   + + +S  W  VVA+EMI   +      G+G  I   +   ++ 
Sbjct: 173 FTTVIIPASVPAIFAGLQVGISSAWASVVAAEMIKAEN------GLGWIIQAGMDNNNMT 226

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL  ++ +  V FL   ++
Sbjct: 227 QILAGIIMIGVVGFLLAYIM 246


>gi|33866448|ref|NP_898007.1| glycine betaine/proline ABC transporter [Synechococcus sp. WH 8102]
 gi|33633226|emb|CAE08431.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 8102]
          Length = 304

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    +   +L+A +++L        LAA+ R +  +  P+LD+MQ++P   +L   
Sbjct: 95  GLWELMVSSLALVLTASLLALAIGLPLGVLAARQRSIWQLTRPLLDLMQTMPAFVYLIPA 154

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + ++ A     +  +       +  +P DL E  RSF  S WQ 
Sbjct: 155 VMLFSTG--------AVPSVIATLIFAMPPVVRLTVLGIRQVPADLIEAGRSFGCSEWQL 206

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P L+  +  ++      VV + MI  G            +   I++ ++ 
Sbjct: 207 LTKVQLPNALPTLMTGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLNIG 259

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D+L
Sbjct: 260 LGFEGGLAVVILAVILDRL 278



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L   ++  V+   ++A  I +P+G+    +  I    +P   L+   PA V+    V   
Sbjct: 99  LMVSSLALVLTASLLALAIGLPLGVLAARQRSIWQLTRPLLDLMQTMPAFVYLIPAVMLF 158

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           S   +   +   +         ++   + G    P D  E   SF  + W+    + LP 
Sbjct: 159 STGAVPSVIATLIF----AMPPVVRLTVLGIRQVPADLIEAGRSFGCSEWQLLTKVQLPN 214

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +TG       A +  +++ +   G +          +    ++ +      G L 
Sbjct: 215 ALPTLMTGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLNIGLGFEGGLA 267

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 268 VVILAVILDRL 278


>gi|326775830|ref|ZP_08235095.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326656163|gb|EGE41009.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 314

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + +         +L +    +  R L   ++++        L A+ + +   +
Sbjct: 88  KLPPPSAVWNSAREMWLAGTLLEVVWTSVSRGLFGFLLAVAIGTPLGLLVARVKLVRAAI 147

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++            +      I    V ++   +   +  
Sbjct: 148 GPILSGLQSLPSVAWVAPAVIWLGLN--------DQMMFAVILLGAVPSIANGLVSGVDQ 199

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 200 VPPLFLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELG 259

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G  +       D+  I  ++L +L V    D L+F P+  W  + R
Sbjct: 260 LGL--GQLLENGRSNFDMPGIFLSILLILFVGIAIDLLIFSPLERWVLRSR 308



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   ++A  I  P+G+ +     + + I P    L + P+  +    V  +    
Sbjct: 115 SVSRGLFGFLLAVAIGTPLGLLVARVKLVRAAIGPILSGLQSLPSVAWVAPAVIWLGL-- 172

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    I   +++G    P  F     +   TG R   +I+LP   P 
Sbjct: 173 --NDQMMFAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVLPAALPG 230

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +           G  +         P + L +L++   
Sbjct: 231 YLAGLKQGWAFSWRSLMAAEIIASSPELGLGL--GQLLENGRSNFDMPGIFLSILLILFV 288

Query: 566 VLALNRFLWHPLYLYGTR 583
            +A++  ++ PL  +  R
Sbjct: 289 GIAIDLLIFSPLERWVLR 306


>gi|157369046|ref|YP_001477035.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157320810|gb|ABV39907.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 281

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 103/232 (44%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ ++ +L        +P  ++  + + +    +     +T   +L A +++++     
Sbjct: 54  VMLAVVGLLAWHATRRWLPTVVIVGLLLLVGTAGMWDKLMQTLALVLVATLLAVIIGIPQ 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S R+  V++P++D+MQ++P   +L   ++ F           ++ AI A     
Sbjct: 114 GILAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLFGLG--------KVPAILATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E   +F  + WQK + + +P ++P ++  +  +       
Sbjct: 166 TPPLIRLTDLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVVASMI-------GARGLGEDVLVGIQTLNVGLGLEAGLAIVILAVVIDRI 270



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 11/174 (6%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II IP GI       + + + P   ++   P+ V+   V+           +   L  + 
Sbjct: 108 IIGIPQGILAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLFGLG----KVPAILATVI 163

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +  E  ++F    W+    + LP   P  + G       + 
Sbjct: 164 YATPPLIRLTDLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSL 223

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +V+ +           GLG  +    +  +    +   L +    + ++R 
Sbjct: 224 SMVVVASMIG-------ARGLGEDVLVGIQTLNVGLGLEAGLAIVILAVVIDRI 270


>gi|15891014|ref|NP_356686.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15159339|gb|AAK89471.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 282

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 15/236 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA  +VI +I  LL           +  +  +      L      T   + +A +++LL 
Sbjct: 49  LAPPVVIALIAALLGWRLINLAAGILAGVALLFCATMGLWAETMSTLALVTTATILALLV 108

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +A  ++ L  VL PILD++Q++P   +L   +                 A+ A 
Sbjct: 109 GIPLGIIAGFTKSLDRVLEPILDLIQTMPPYIYLLPAIALLGYG--------PATALIAT 160

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +          +   PR+  E+  +  L+ WQ F  + +PF++P ++  +  S+  
Sbjct: 161 FIVAMPPAIRLTSLGIRMTPREFIELGHASGLTPWQMFMKIRLPFAIPSVMAGINQSLMM 220

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +  VV + ++  G       G+G  I  A++  D+   + A + ++ +  + D+L
Sbjct: 221 AFGMVVIAGIVGSG-------GLGETIYGAVRTLDIATSINAAIAIVILTMVLDRL 269



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 88/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L +    V+  +A  + W+ I           +L+   +G       T+  V    
Sbjct: 43  ILWLLQLAPPVVIALIAALLGWRLINLAAGILAGVALLFCATMGLWAETMSTLALVTTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           I+A ++ IP+GI  GF   +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 ILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPPYIYLLPAIALLGYGPATALIATFI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T W+ +  I LP   P  + G   + 
Sbjct: 163 V----AMPPAIRLTSLGIRMTPREFIELGHASGLTPWQMFMKIRLPFAIPSVMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         +   + +    + L+R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYGAVRTLDIATSINAAIAIVILTMVLDRL 269


>gi|91224752|ref|ZP_01260012.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01]
 gi|254227614|ref|ZP_04921045.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395662|ref|YP_003287515.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|269964379|ref|ZP_06178621.1| putative permease of ABC transporter [Vibrio alginolyticus 40B]
 gi|91190298|gb|EAS76567.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01]
 gi|151939656|gb|EDN58483.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339256|gb|ACY53050.1| L-proline Glycine Betaine ABC transport system permease protein
           proW [Vibrio sp. Ex25]
 gi|269830876|gb|EEZ85093.1| putative permease of ABC transporter [Vibrio alginolyticus 40B]
          Length = 266

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T + + +A  IS+L       +AA    L  +L PILD+MQ++P   +L  T+V
Sbjct: 76  WQEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLV 135

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI            Y  +  +P +L E  ++F  S  +  +
Sbjct: 136 LFGL---GIVPGLISTIIFAIAAP-----IRLTYLGIIKVPEELLEAGKAFGASRMKLLF 187

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + ++          G+G  +  A+   ++   
Sbjct: 188 KVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQG 240

Query: 242 LYAMLTMLGVIFLYDQL 258
             A L ++ V  + D+L
Sbjct: 241 FEAGLAIVLVAIILDRL 257



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 18/264 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
            S     +  TL  I     + F  +     +     I WF       +     ++  I+
Sbjct: 12  ASGFFDAISITLETIILFVVDIFKWMPPAAPIIMTAAIAWFLHRSIPLVVFIVLALLAIL 71

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           N   +Q++L    L       V     I+ +I +P+GI    RP + + ++P   L+   
Sbjct: 72  NLGYWQEMLETFVL-------VFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTV 124

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P  V+    +  +  + L     L   +IF     I      G    P +  E   +F  
Sbjct: 125 PTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGIIKVPEELLEAGKAFGA 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +    + LP   P  + G       + +  +++ +           GLG  +  +  
Sbjct: 181 SRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVG-------ADGLGKPVVRALN 233

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
             +  +     L +    + L+R 
Sbjct: 234 TVNISQGFEAGLAIVLVAIILDRL 257


>gi|258545018|ref|ZP_05705252.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519744|gb|EEV88603.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 264

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           P       F +++ +  + +            P +I+  +   L    L  +   +  R+
Sbjct: 20  PRWMGWATFAVLLALWEMAVRAGWISRTFIASPAEIIVQLQNLLLSGELWLHLGASLRRL 79

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    +      +   +   SR     L+P++  +  +P +  L   +V+F      K  
Sbjct: 80  LIGWGLGSALGIMIGLMIGLSRVARGTLLPLVSALFPVPKIALLPLFLVWFGIDEGSK-- 137

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +  I    ++    + Y ++ N+ R+L  + +SF L        + +P +MPG+
Sbjct: 138 ------VATILIGTLFPTVIATYAAVDNVDRNLIRMGQSFGLPPAAIVRKIILPGAMPGI 191

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                +S+S     +V +EM+          G+G+YIA A +   +  +L  +  +  + 
Sbjct: 192 FAGFRISISIAITMLVVAEMM------NADRGVGAYIAAAGQLYQMDQLLAGVTLLALLG 245

Query: 253 FLYDQLL---FRPMIVWSN 268
            +   LL    R ++ W  
Sbjct: 246 IVLSWLLGVCERRVLRWRE 264



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 20/258 (7%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGV---AIGIAWQSIGYIVNHFTYQDVLYVIWL 382
             P               +    F V+  +   A+   W S  +I +       L  + L
Sbjct: 5   RIPVPLRARAFGGAAPRWMGWATFAVLLALWEMAVRAGWISRTFIASPAEIIVQLQNLLL 64

Query: 383 GC-------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     ++ R+++   + S + I +G+ IG        + P    L   P     P
Sbjct: 65  SGELWLHLGASLRRLLIGWGLGSALGIMIGLMIGLSRVARGTLLPLVSALFPVPKIALLP 124

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +        +        ++ GT +  +    A       +   +  SF +      R
Sbjct: 125 LFLVWFGIDEGSKVAT----ILIGTLFPTVIATYAAVDNVDRNLIRMGQSFGLPPAAIVR 180

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            IILPG  P    G   +   A    +V+E+ +         G+GAYIA + +     ++
Sbjct: 181 KIILPGAMPGIFAGFRISISIAITMLVVAEMMN------ADRGVGAYIAAAGQLYQMDQL 234

Query: 556 VLGVLIMCCFVLALNRFL 573
           + GV ++    + L+  L
Sbjct: 235 LAGVTLLALLGIVLSWLL 252


>gi|293392812|ref|ZP_06637130.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291424671|gb|EFE97882.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 284

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 103/232 (44%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ ++ +L        +P  ++  + + +    +     +T   +L A +++++     
Sbjct: 54  LMLAVVGLLAWHATRRWLPTAVMVGLLLLVGAAGMWDKLMQTLALVLVATLLAVIIGIPQ 113

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LAA+S R+  V++P++D+MQ++P   +L   ++ F           ++ AI A     
Sbjct: 114 GILAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLFGLG--------KVPAILATVIYA 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  + +++ E   +F  + WQK + + +P ++P ++  +  +       
Sbjct: 166 TPPLIRLTDLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLSM 225

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI          G+G  + + I+  ++   L A L ++ +  + D++
Sbjct: 226 VVVASMI-------GARGLGEDVLVGIQTLNVGLGLEAGLAIVILAVVIDRI 270



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 81/277 (29%), Gaps = 11/277 (3%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           RF    +      +   V         I        +QL    R +    +     +   
Sbjct: 5   RFTFSIADWINGWVDILVNNYGDMFRNISDSLLWAVIQLEGLLRATPWWLMLAVVGLLAW 64

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W     +V          +      T+  V+V  ++A II IP GI       + 
Sbjct: 65  HATRRWLPTAVMVGLLLLVGAAGMWDKLMQTLALVLVATLLAVIIGIPQGILAARSDRVR 124

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + + P   ++   P+ V+   V+           +   L  +      ++     G    
Sbjct: 125 AVMMPLMDVMQTMPSFVYLIPVLMLFGLG----KVPAILATVIYATPPLIRLTDLGIRQV 180

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E  ++F    W+    + LP   P  + G       + +  +V+ +         
Sbjct: 181 DKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLSMVVVASMIG------- 233

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             GLG  +    +  +    +   L +    + ++R 
Sbjct: 234 ARGLGEDVLVGIQTLNVGLGLEAGLAIVILAVVIDRI 270


>gi|333008921|gb|EGK28381.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-272]
 gi|333020231|gb|EGK39501.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-227]
          Length = 263

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTTFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 86/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTTFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILP   P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|320181997|gb|EFW56902.1| Alkanesulfonates transport system permease protein [Shigella boydii
           ATCC 9905]
          Length = 242

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 17/238 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V           L Q+ + ++ R L    I      +   ++  SR    +L 
Sbjct: 18  LPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLD 77

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P L  +   +++F           E A IF +    ++ +  + +  + NI
Sbjct: 78  TSIQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYINTWHGIRNI 129

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 130 DRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS---- 185

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
             GIG     A +      ++ A++    +  L D   QLL R  + W+  + L+  T
Sbjct: 186 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEAT 241



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 79/227 (34%), Gaps = 19/227 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G +   +T      +     I+ +R ++   I   + + +G+  G        +    Q+
Sbjct: 23  GVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQM 82

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PLV+                L+  GT + I  N   G         E+A 
Sbjct: 83  LRNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMAR 138

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S+ ++G   + ++ILPG  P  + G   A G  W   IV+E  S        +G+G    
Sbjct: 139 SYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAM 192

Query: 545 ESTEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGT 582
            + E      VV+ +++              L R    W+P Y    
Sbjct: 193 NAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKE 239


>gi|254976537|ref|ZP_05273009.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255093922|ref|ZP_05323400.1| putative ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255315674|ref|ZP_05357257.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255518335|ref|ZP_05386011.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255651452|ref|ZP_05398354.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260684512|ref|YP_003215797.1| putative ABC transporter permease [Clostridium difficile CD196]
 gi|260688170|ref|YP_003219304.1| putative ABC transporter permease [Clostridium difficile R20291]
 gi|306521276|ref|ZP_07407623.1| putative ABC transporter, permease protein [Clostridium difficile
           QCD-32g58]
 gi|260210675|emb|CBA65424.1| putative ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260214187|emb|CBE06433.1| putative ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 260

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 10/177 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M RV++   I + I +P+GI+ G    +    +     L   P     P+
Sbjct: 57  GSIFINVYASMKRVLIGFAINTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPM 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      ++++  + + I  + + G     +   EV   F  +  +    
Sbjct: 117 LILWFGIGEESK----IIIIVLASFFPIFTSTLKGIKNCDSKLIEVGRVFEFSKLQIIFK 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           II+P        G   A G ++ A I +E+ +       ++GLG  I++  E     
Sbjct: 173 IIIPNAILDIAVGLKLALGYSFRAIIGAELVA------ASSGLGYLISDGKEMSRTD 223



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 81/227 (35%), Gaps = 15/227 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  ++      +L+  I N L +        P  +       +   S+      +  R+
Sbjct: 11  RLVKSVLIFFIILLLWKITNYLGIWSDYILPSPEKVYSTFLNMISDGSIFINVYASMKRV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I+                +      +++ +++ P L  +   +++F      K+I
Sbjct: 71  LIGFAINTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPMLILWFGIGEESKII 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA+ F IFT        S  + + N    L EV R F  S  Q  + + +P ++  +
Sbjct: 131 IIVLASFFPIFT--------STLKGIKNCDSKLIEVGRVFEFSKLQIIFKIIIPNAILDI 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +++   +  ++ +E++          G+G  I+   +     
Sbjct: 183 AVGLKLALGYSFRAIIGAELVAASS------GLGYLISDGKEMSRTD 223


>gi|91780154|ref|YP_555361.1| taurine ABC transporter inner membrane protein [Burkholderia
           xenovorans LB400]
 gi|91692814|gb|ABE36011.1| ABC taurine family transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
          Length = 283

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 86/275 (31%), Gaps = 25/275 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                  P   L       +  +  +     +   A    W    ++             
Sbjct: 15  RAAGRRKPRRGLPGEGPTAILSVASVVAIAALWWAATSFHWVPPLFLPAPQAVWSAFVDA 74

Query: 381 WLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           W G I            +  RV     +AS+  +PVGI +G        + P  +     
Sbjct: 75  WNGRIQGGLPLCQHLMWSAIRVFGAFALASVTAVPVGILMGVSRIARGLLDPPLEFYRPL 134

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PLVV               +++       I     AG  +   +    A S   
Sbjct: 135 PPLAYLPLVVIWFGI----DETAKLIVIYLACFAPIAMAARAGVRSATAEQVNAAYSLGA 190

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +  R+++LP   P  +TG   A G  W   + +E+ +       T GLG  +  ++ 
Sbjct: 191 SFAQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASS 244

Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
                 VV+G++++       +   R L   L  +
Sbjct: 245 FLRTDVVVMGIVLIGLIAWTFDLGMRALERRLVPW 279



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   + +R+  A  ++ +       L   SR    +L P L+  + +P L +L   V
Sbjct: 85  LCQHLMWSAIRVFGAFALASVTAVPVGILMGVSRIARGLLDPPLEFYRPLPPLAYLPLVV 144

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  I+ +    +  +    + +   +    + S   S  Q  
Sbjct: 145 IWFGID--------ETAKLIVIYLACFAPIAMAARAGVRSATAEQVNAAYSLGASFAQVV 196

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 197 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 250

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + + +D   + L R ++ W  K
Sbjct: 251 VVMGIVLIGLIAWTFDLGMRALERRLVPWRGK 282


>gi|326789322|ref|YP_004307143.1| glycine/betaine ABC transporter periplasmic protein [Clostridium
           lentocellum DSM 5427]
 gi|326540086|gb|ADZ81945.1| ABC-type glycine betaine transport, periplasmic subunit
           [Clostridium lentocellum DSM 5427]
          Length = 521

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 19/199 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   TTL +      ++L       L    ++L   ++ I +++Q+IP +  L F +
Sbjct: 18  LVEHIKLTTLSV----GFAILIGVPLGILICYIKKLNKPILGIANVIQAIPSMALLGFAI 73

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +             L AI  +    +  +  + Y  + +IP    E +R   L+  Q  
Sbjct: 74  PFLGIG--------TLPAIVTVVLYSLLPIIKNTYTGINSIPPQTIESARGIGLTKLQIL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+  +   
Sbjct: 126 FKVQIPLALPVIMAGVRIS------AVTAVGLMTMAAF-IGAGGLGYLVFSGIRTVNNNQ 178

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL   +    +  L D L+
Sbjct: 179 ILAGAIPACLLALLVDFLV 197



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 11/182 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +  A +I +P+GI I +   ++  I   A ++ A P+       +  +    L     
Sbjct: 27  LSVGFAILIGVPLGILICYIKKLNKPILGIANVIQAIPSMALLGFAIPFLGIGTL----P 82

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + ++  +   I+ N   G ++ P    E A    +T  +    + +P   P  + G  
Sbjct: 83  AIVTVVLYSLLPIIKNTYTGINSIPPQTIESARGIGLTKLQILFKVQIPLALPVIMAGVR 142

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +   A     ++     G       GLG  +       +  +++ G +  C   L ++ 
Sbjct: 143 ISAVTAVGLMTMAAFIGAG-------GLGYLVFSGIRTVNNNQILAGAIPACLLALLVDF 195

Query: 572 FL 573
            +
Sbjct: 196 LV 197


>gi|255307972|ref|ZP_05352143.1| putative ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
          Length = 260

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 10/177 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M RV++   I++ I +P+GI+ G    +    +     L   P     P+
Sbjct: 57  GSIFINVYASMKRVLIGFAISTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPM 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      ++++  + + I  +   G     +   EV   F  +  +    
Sbjct: 117 LILWFGIGEESK----IIIIVLASFFPIFTSTFKGIKNCDSKLIEVGRVFEFSKLQIIFK 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           II+P        G   A G ++ A I +E+ +       ++GLG  I++  E     
Sbjct: 173 IIIPNAILDIAVGLKLALGYSFRAIIGAELVA------ASSGLGYLISDGKEMSRTD 223



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 15/227 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  ++      +L+  I N L +        P  +       +   S+      +  R+
Sbjct: 11  RLVKSVLIFFIILLLWKITNYLGIWSDYILPSPEKVYSTFLNMISDGSIFINVYASMKRV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    IS                +      +++ +++ P L  +   +++F      K+I
Sbjct: 71  LIGFAISTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPMLILWFGIGEESKII 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA+ F IFT        S ++ + N    L EV R F  S  Q  + + +P ++  +
Sbjct: 131 IIVLASFFPIFT--------STFKGIKNCDSKLIEVGRVFEFSKLQIIFKIIIPNAILDI 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +++   +  ++ +E++          G+G  I+   +     
Sbjct: 183 AVGLKLALGYSFRAIIGAELVAASS------GLGYLISDGKEMSRTD 223


>gi|307947483|ref|ZP_07662816.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4]
 gi|307769301|gb|EFO28529.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4]
          Length = 282

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 89/234 (38%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++     L + I         V    + +      +  + T   ++ A V+ +     
Sbjct: 54  LVIVVATTALAYAIHRRIGFTVFVGAALLLIINQGYWEETTETLALVIGASVVCMAVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   +L  VL PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 IGVAAAHRPKLFSVLRPILDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P+ L E   +F  +  Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTQLGVSSTPKQLLEAGEAFGATKSQLLWKIELPYALPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G     A+   ++       + ++ +  + D+  
Sbjct: 226 MVVIAALV-------GADGLGVPTLRALNTVNIAKGFEVGVAIVLIAIVLDRFF 272



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 98/282 (34%), Gaps = 25/282 (8%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            +F+ ++  +++ FF  ++  ++++   +  +        + + +      +     F V
Sbjct: 16  KHFVDWLTDNAYWFFDAIAYGLERMIDAILWMLQTPHPLVIVVATTALAYAIHRRIGFTV 75

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             G A+ +       I+N   +++          T+  V+   ++   + +P+G+    R
Sbjct: 76  FVGAALLL-------IINQGYWEE-------TTETLALVIGASVVCMAVGVPIGVAAAHR 121

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P + S ++P   L+   P  V+    +       +   +   +  I      I      G
Sbjct: 122 PKLFSVLRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---PIRL-TQLG 177

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S+ P    E   +F  T  +    I LP   P  + G       + +  +++ +     
Sbjct: 178 VSSTPKQLLEAGEAFGATKSQLLWKIELPYALPQIMAGLTQTIMLSLSMVVIAALVG--- 234

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLG     +    +  +     + +    + L+RF 
Sbjct: 235 ----ADGLGVPTLRALNTVNIAKGFEVGVAIVLIAIVLDRFF 272


>gi|194292722|ref|YP_002008629.1| alkanesulfonate transport protein, ABC superfamily, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|193226626|emb|CAQ72577.1| putative alkanesulfonate transport protein, ABC superfamily, inner
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 265

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 84/203 (41%), Gaps = 16/203 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L+   I      V+ T    SR    ++ P    ++ I +  ++    V+F      
Sbjct: 71  WRDLAGFAIGASAGLVFGTALGLSRLFERLVGPSFHTVKQISLFAWIPLISVWFGLGDAA 130

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV+   LAA F         +  + ++ +  +P DL EV+R  R +  Q  W + +P + 
Sbjct: 131 KVVFLSLAAFF--------PVVLNTFEGIRAVPVDLLEVARVLRFNRTQVLWRVVLPSAA 182

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + +++   W   + +E ++V        GIG+ +    +   +  +++ ++ + 
Sbjct: 183 PSIFAGIHLALIYAWLATLGAEYLLVSGK-----GIGNTMTDGRENFWMDLVIFGVIVVG 237

Query: 250 GVIFLYDQLLFR---PMIVWSNK 269
            V F  + +  R    ++ W  +
Sbjct: 238 LVGFTLNWIASRIESRLLAWRGR 260



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 76/255 (29%), Gaps = 15/255 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R    +        L L         +   W      V +   W +    V       
Sbjct: 5   AIRLRIRLPRALRGWVLPLALLALWWAAVRFGWTTSPLLVPVSSVWDTAVRQVQS----- 59

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      +++R +    I +   +  G  +G        + P    +       + P
Sbjct: 60  -GALATALAASLWRDLAGFAIGASAGLVFGTALGLSRLFERLVGPSFHTVKQISLFAWIP 118

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+            ++LS        + ++ N   G  A P D  EVA        +   
Sbjct: 119 LISVWFGLGDAAKVVFLS----LAAFFPVVLNTFEGIRAVPVDLLEVARVLRFNRTQVLW 174

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P    G   A   AW A++ +E        +   G+G  + +  E      V
Sbjct: 175 RVVLPSAAPSIFAGIHLALIYAWLATLGAEYLL-----VSGKGIGNTMTDGRENFWMDLV 229

Query: 556 VLGVLIMCCFVLALN 570
           + GV+++      LN
Sbjct: 230 IFGVIVVGLVGFTLN 244


>gi|121605316|ref|YP_982645.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120594285|gb|ABM37724.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 300

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 17/254 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC- 384
               + +     QR    L      V+  VA  + W S   +          + + +   
Sbjct: 35  RLDASAILRDLGQRALPWLVPVGLIVLWQVAASLGWLSTRVLPAPSEVIKAAWALTVSGE 94

Query: 385 ------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 ++ +R +  + I   + + +G+  G      + +    Q++   PA    PLV+
Sbjct: 95  LWTHVKVSAWRALAGLAIGGGLGLGLGLLTGSVKFFETLLDSTIQMVRNIPALALIPLVI 154

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           L+     + +  N   G         E+  ++ ++ W+ +R +I
Sbjct: 155 LWFGI----DETAKLFLIAVSVFFPLYINTFHGIRNVDPGLIEMGRTYGLSRWQLYREVI 210

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG     + G   A G  W   IV+E  S         G+G     + E      V++G
Sbjct: 211 LPGAMSSILVGLRFALGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVG 264

Query: 559 VLIMCCFVLALNRF 572
           +L+        + F
Sbjct: 265 ILLYALLGKLADVF 278



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 19/269 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           + +R  P     +  +++  +   L     +    P +++           L  +   + 
Sbjct: 45  LGQRALP-WLVPVGLIVLWQVAASLGWLSTRVLPAPSEVIKAAWALTVSGELWTHVKVSA 103

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L+ + I          L    +    +L   + ++++IP L  +   +++F      
Sbjct: 104 WRALAGLAIGGGLGLGLGLLTGSVKFFETLLDSTIQMVRNIPALALIPLVILWFGID--- 160

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E A +F I  S  + +  + +  + N+   L E+ R++ LS WQ +  + +P +M
Sbjct: 161 -----ETAKLFLIAVSVFFPLYINTFHGIRNVDPGLIEMGRTYGLSRWQLYREVILPGAM 215

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  +  ++   W  ++ +E I          GIG     A +      +L  +L   
Sbjct: 216 SSILVGLRFALGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVGILLYA 269

Query: 250 GVIFLYDQL---LFRPMIVWSNKFRLERT 275
            +  L D     L R  + W   ++ +  
Sbjct: 270 LLGKLADVFARGLERYWLRWHPGYQSQSA 298


>gi|324113735|gb|EGC07710.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 263

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R+L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRVLIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 ARIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 85/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +RV+
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRVL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 RIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239


>gi|209918186|ref|YP_002292270.1| alkanesulfonate transporter permease subunit [Escherichia coli
           SE11]
 gi|209911445|dbj|BAG76519.1| sulfonate ABC transporter permease component [Escherichia coli
           SE11]
          Length = 263

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSRRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 86/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+  R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSRRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|323526223|ref|YP_004228376.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323383225|gb|ADX55316.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 288

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +   +   I +   + DV        ++ +R V    I   I + +G+  G    +  
Sbjct: 69  LAVVKAAWSLIRSGEMWADVK-------VSTWRAVSGFAIGGGIGLTLGLATGLFKPVEI 121

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +    Q++   PA    PLV+                L+  G  + +  N   G  +  
Sbjct: 122 ALDSTVQMIRNIPALAMIPLVILWFGIE----EQAKVFLVALGVFFPVYVNTFHGIRSVD 177

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E+A S+ + G   +R++ILPG  P  + G   A G  W   IV+E  S        
Sbjct: 178 ANLIEMARSYGVKGLALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------AQ 231

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +G+G     + E      VV+G+L+        +  
Sbjct: 232 SGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVL 267



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 95/260 (36%), Gaps = 17/260 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +  LL  +         +   +    P  +V      +    +      +T R +S
Sbjct: 38  LAPWVVPLLILLAWEAAARSGVLSTRVLPEPLAVVKAAWSLIRSGEMWADVKVSTWRAVS 97

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I               + + + L   + ++++IP L  +   +++F           
Sbjct: 98  GFAIGGGIGLTLGLATGLFKPVEIALDSTVQMIRNIPALAMIPLVILWFGIE-------- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  + +  + ++  +L E++RS+ + G   + ++ +P ++P ++ 
Sbjct: 150 EQAKVFLVALGVFFPVYVNTFHGIRSVDANLIEMARSYGVKGLALYRHVILPGALPSILV 209

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +    W  ++ +E I          GIG     A +      ++  +L    +  +
Sbjct: 210 GVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKI 263

Query: 255 YDQL---LFRPMIVWSNKFR 271
            D L   L R  + W   ++
Sbjct: 264 ADVLAKSLERLSLRWHPAYQ 283


>gi|332970596|gb|EGK09582.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Desmospora sp. 8437]
          Length = 508

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 23/186 (12%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I++L          + +R+   ++ +  ++Q+IP L  L F +              +  
Sbjct: 35  IAVLIALPLGVWLTRRQRVAEPVIGVTAVLQTIPSLALLGFMIPLIGIG--------KTP 86

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    +  +  + Y  +  +   L E +    +S W++   + +P +MP ++  + 
Sbjct: 87  AVIALTAYALLPILRNTYTGIREVDPALIEAATGMGMSSWRRLVKVELPLAMPVIMAGVR 146

Query: 198 MSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            +M           +++VG       I   G+G  I   I+  D   IL   +    +  
Sbjct: 147 TAM-----------VLIVGTATLAALIGAGGLGDLILTGIQRADNGYILLGAIPAALLAL 195

Query: 254 LYDQLL 259
            +D +L
Sbjct: 196 FFDGVL 201



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA +I +P+G+W+  R  ++  +     +L   P+      ++  +        + L+  
Sbjct: 35  IAVLIALPLGVWLTRRQRVAEPVIGVTAVLQTIPSLALLGFMIPLIGIGKTPAVIALTAY 94

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +      IL N   G         E A+   ++ WR    + LP   P  + G  TA  
Sbjct: 95  ALL----PILRNTYTGIREVDPALIEAATGMGMSSWRRLVKVELPLAMPVIMAGVRTAMV 150

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                + ++ +   G       GLG  I    ++     ++LG +      L  +  L  
Sbjct: 151 LIVGTATLAALIGAG-------GLGDLILTGIQRADNGYILLGAIPAALLALFFDGVL-- 201

Query: 576 PLYLYGTRC 584
                  + 
Sbjct: 202 ---RLTEKR 207


>gi|325519243|gb|EGC98696.1| sulfonate/nitrate/taurine transporter permease [Burkholderia sp.
           TJI49]
          Length = 92

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/92 (59%), Positives = 76/92 (82%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+WIG RP ++ K+QP AQ LAAFPAN+ FP+ V  ++ +HLN ++WLS L++ GTQWY
Sbjct: 1   VGVWIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWY 60

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ILFNVIAGA+++PND++E A++F I GW+WWR
Sbjct: 61  ILFNVIAGATSYPNDYREAATNFRIRGWQWWR 92



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                     L   L P+   + + P           F+ +     + A++     I   
Sbjct: 1   VGVWIGLRPALAEKLQPLAQFLAAFPANLLFPV----FVIVIARFHLNADIWLSPLIVLG 56

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             W + F++     + P D  E + +FR+ GWQ + 
Sbjct: 57  TQWYILFNVIAGATSYPNDYREAATNFRIRGWQWWR 92


>gi|227819996|ref|YP_002823967.1| taurine ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|36958637|gb|AAQ87105.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227338995|gb|ACP23214.1| permease component of taurine ABC transporter [Sinorhizobium fredii
           NGR234]
          Length = 284

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 94/276 (34%), Gaps = 19/276 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R                  +      L + W        +   +     +V    +  V 
Sbjct: 19  RREPERPPVRRRQVPVWLISLLTVISLLLIWAAAASAELVSPVFLPSPAVVASSLWNLVT 78

Query: 378 YVIWLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                         ++ RV+  + +A +I +P G+ IG        + P  + L   P  
Sbjct: 79  VGFVDSTLAQHVLASLGRVLGALGVAVLIGVPAGLAIGTSRIGRGILDPIVEFLRPLPPL 138

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL++       ++    ++L M+      I+ +  AG  + P D    A +F  T  
Sbjct: 139 AYLPLIIIWFGIGEVSKMTVIALSMLPS----IVISTAAGVRSVPKDHINAARAFGATRR 194

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +   +++LP      +TG   A G  W+  + +E+ +       T GLG  I  + +   
Sbjct: 195 QVTLHVVLPSALASILTGTRIALGTGWSTLVAAELVA------ATRGLGFMIQSAAQFLV 248

Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRC 584
              V+ G+ ++    + L    R L   L  + +  
Sbjct: 249 TDVVIAGIAVIALIAILLEIAARALEKWLAPWASAR 284



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 113/268 (42%), Gaps = 26/268 (9%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------ 62
           P + RR  P ++ +    ++  ++        E   P  +     +   + +L       
Sbjct: 25  PPVRRRQVP-VWLISLLTVISLLLIWAAAASAELVSPVFLPSPAVVASSLWNLVTVGFVD 83

Query: 63  ----QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
               Q+   +  R+L A+ +++L           SR    +L PI++ ++ +P L +L  
Sbjct: 84  STLAQHVLASLGRVLGALGVAVLIGVPAGLAIGTSRIGRGILDPIVEFLRPLPPLAYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E++ +  I  S + ++  S    + ++P+D    +R+F  +  Q
Sbjct: 144 IIIWFGIG--------EVSKMTVIALSMLPSIVISTAAGVRSVPKDHINAARAFGATRRQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++  ++    +++  GW  +VA+E++          G+G  I  A +   +
Sbjct: 196 VTLHVVLPSALASILTGTRIALGTGWSTLVAAELVA------ATRGLGFMIQSAAQFL-V 248

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             ++ A + ++ +I +  ++  R +  W
Sbjct: 249 TDVVIAGIAVIALIAILLEIAARALEKW 276


>gi|13488115|ref|NP_085731.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14027980|dbj|BAB54572.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 293

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 19/281 (6%)

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
           +    + +     +       ++        +L   + + +   I    ++   ++G   
Sbjct: 7   TAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIWSLGSVA 66

Query: 362 QSIGYIVNHFTYQDVLYVIWLGC---------ITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             I        +  V   I L            + +R    +    +I   + +  G   
Sbjct: 67  GLIDPRTLPAPWSVVGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLALISGLSR 126

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              + I    Q+  A P     PL++             ++L ++      I     +  
Sbjct: 127 LGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEGMKVTAIALAVLI----PIYIQTHSSL 182

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            +  + + E+A +  +    + R +ILPG  P +  G   A   AW + +V E  +    
Sbjct: 183 RSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVN---- 238

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              T+G+G  I  +   G    V++G+ +     L  +  +
Sbjct: 239 --ATSGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIV 277



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 90/248 (36%), Gaps = 19/248 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           P  F  L    ++ +I  L         +    P  +V      +    L  +   +  R
Sbjct: 44  PIPFGALIGPALLLVIWSLGSVAGLIDPRTLPAPWSVVGTAIDLIAEGKLQDHLMTSAWR 103

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               +   +L   V A ++  SR    ++   + I ++IP L  +   +++F      K 
Sbjct: 104 AAQGLAFGVLIGTVLALISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEGMK- 162

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  + AI  + +  +    + SL +I     E++++ R+   +    + +P ++PG
Sbjct: 163 -------VTAIALAVLIPIYIQTHSSLRSIDSRYVELAQTLRMGYGEFIREVILPGALPG 215

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + ++++  W  +V  E +          GIG  I LA        ++  +     +
Sbjct: 216 FFLGLRLAVTYAWLSLVVVEQV------NATSGIGYMIDLARNYGQTDIVIVGLAVYALL 269

Query: 252 IFLYDQLL 259
               D ++
Sbjct: 270 GLGCDGIV 277


>gi|306832148|ref|ZP_07465302.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325979071|ref|YP_004288787.1| putative aliphatic sulfonates transport permease ssuC
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|304425587|gb|EFM28705.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178999|emb|CBZ49043.1| putative aliphatic sulfonates transport permease protein ssuC
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 257

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 12/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAW--QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +  +L IFW   V    I  ++       +    +      +     I+++R  V  +I 
Sbjct: 20  IPALLIIFWQIGVMAGWITSSFIPSPWSVLKQGVSLFKKGTLQENISISLYRASVGFVIG 79

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I   +G+  G             Q+L   P     P+V+  +             L+ 
Sbjct: 80  GGIGFLLGVINGVSRVARMTFDSTIQMLRNIPHLALIPVVILVLGIGET----AKISLVA 135

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G ++  +   E+  S+ ++  + +R II PG  P  + G   A G  
Sbjct: 136 IGCLFPMYINTYHGITSVDSHLVEMGKSYGLSRLQMFRKIIFPGAMPTILMGVRYALGVM 195

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           W   IV+E  S        +G+G     + +  +   + L +LI        +
Sbjct: 196 WTTLIVAETVS------ADSGIGYMSTNAQQFMNMKTIFLCILIYALLGKLSD 242



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 92/242 (38%), Gaps = 16/242 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            + + A +++   I ++   I  + +P    ++          +L +  S +  R     
Sbjct: 17  PWLIPALLIIFWQIGVMAGWITSSFIPSPWSVLKQGVSLFKKGTLQENISISLYRASVGF 76

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI     F+   +   SR   M     + ++++IP L  +   ++             E 
Sbjct: 77  VIGGGIGFLLGVINGVSRVARMTFDSTIQMLRNIPHLALIPVVILVLGIG--------ET 128

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A I  +    ++ M  + Y  + ++   L E+ +S+ LS  Q F  +  P +MP ++  +
Sbjct: 129 AKISLVAIGCLFPMYINTYHGITSVDSHLVEMGKSYGLSRLQMFRKIIFPGAMPTILMGV 188

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E +          GIG     A +  ++  I   +L    +  L D
Sbjct: 189 RYALGVMWTTLIVAETVSADS------GIGYMSTNAQQFMNMKTIFLCILIYALLGKLSD 242

Query: 257 QL 258
            +
Sbjct: 243 FI 244


>gi|258515496|ref|YP_003191718.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
 gi|257779201|gb|ACV63095.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
          Length = 248

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 11/238 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I ++ +           +       F       +     I+ +RVV+ +II+ ++ +
Sbjct: 15  LVLILFWQLAASGLKEPYLPAPYLAFQAFALAITKELARHFLISSYRVVLSLIISLLLAV 74

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G +      + P   ++   P  VF P+ +S     +L+  L ++L++ F    
Sbjct: 75  PLGLVLGRKALWDKFLSPLIFVVYPIPKIVFLPIFMSFFGLGNLSKILLITLVVFF---- 130

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL      A +  N   +  +S        + ++I P   P  +T      G A     
Sbjct: 131 QILVTTRDAARSVDNRLIDSVTSLGAGKLDIYLHVIFPACLPDILTSLRIGLGTAIAVLF 190

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           +SE  +       + G+G Y+ ++  + ++ E+  GV+ M    L L  F+   L   
Sbjct: 191 ISESIA------SSEGIGYYLMDAWSRVAYDEMFSGVIAMGILGLIL-YFILERLEKL 241



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
             A +++I    +   G++E  +P   +      L +   L ++   ++ R++ +++ISL
Sbjct: 11  FWAVLVLILFWQLAASGLKEPYLPAPYLAFQAFALAITKELARHFLISSYRVVLSLIISL 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       +  +       L P++ ++  IP + FL   + +F      K++   L   F
Sbjct: 71  LLAVPLGLVLGRKALWDKFLSPLIFVVYPIPKIVFLPIFMSFFGLGNLSKILLITLVVFF 130

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +           +  ++   L +   S        + ++  P  +P ++ ++ + +
Sbjct: 131 QILVT--------TRDAARSVDNRLIDSVTSLGAGKLDIYLHVIFPACLPDILTSLRIGL 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                 +  SE I   +      GIG Y+  A        +   ++ M  +  +   +L 
Sbjct: 183 GTAIAVLFISESIASSE------GIGYYLMDAWSRVAYDEMFSGVIAMGILGLILYFILE 236

Query: 261 R 261
           R
Sbjct: 237 R 237


>gi|323190755|gb|EFZ76024.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli RN587/1]
          Length = 263

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 91/260 (35%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++   F      
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALFGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L RF   W+P Y    
Sbjct: 241 SAQLLERFWLRWNPAYHLKE 260



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++       L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALFGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERFWLRWNPAYHLKEAT 262


>gi|152997518|ref|YP_001342353.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150838442|gb|ABR72418.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 281

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 18/241 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMV 77
           D +  +    +I I+L G+        ++  + ++L +     Y     +T + ++SA  
Sbjct: 46  DAIDSLHPFAVITIILVGVWFLHRSIGLLIFITLSLLLIINMGYWIETIQTLVLVVSATA 105

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS+L        AA    L   L PILD+MQ+IP   +L  T++ F     G V G    
Sbjct: 106 ISVLIGVPIGIAAAHRPWLYTTLRPILDLMQTIPTFVYLIPTLILFGL---GYVPGLIST 162

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFAI            Y  +  +P +L E   +F  +  +  + + +P +MP ++  + 
Sbjct: 163 IIFAIAAP-----IRLTYLGVSKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAGVT 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             +      VV + ++          G+G  +  A+   ++     A + ++ V  + D+
Sbjct: 218 QCIMLSLSMVVVAALV-------GADGLGKPVIRALNTVNISQGFEAGVAIVLVAIMLDR 270

Query: 258 L 258
           +
Sbjct: 271 I 271



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 92/280 (32%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++        +  S     +  TL  +     +    L     ++ +L   WF   
Sbjct: 10  PLGAWMENFVDWLVTAASVFFDLVSITLETMIVTMVDAIDSLHPFAVITIILVGVWFLHR 69

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +     S+  I+N   + + +        T+  VV    I+ +I +P+GI    RP
Sbjct: 70  SIGLLIFITLSLLLIINMGYWIETIQ-------TLVLVVSATAISVLIGVPIGIAAAHRP 122

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + ++P   L+   P  V+    +      ++   +   +  I      I      G 
Sbjct: 123 WLYTTLRPILDLMQTIPTFVYLIPTLILFGLGYVPGLISTIIFAIAA---PIRL-TYLGV 178

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           S  PN+  E   +F  T  +    + LP   P  + G       + +  +V+ +      
Sbjct: 179 SKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAGVTQCIMLSLSMVVVAALVG---- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                GLG  +  +    +  +     + +    + L+R 
Sbjct: 235 ---ADGLGKPVIRALNTVNISQGFEAGVAIVLVAIMLDRI 271


>gi|325569216|ref|ZP_08145421.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus casseliflavus ATCC 12755]
 gi|325157465|gb|EGC69625.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus casseliflavus ATCC 12755]
          Length = 244

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 10/201 (4%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +     ++     ++ RV   +  A ++ +P+GI IG    +   + P    L   
Sbjct: 37  AERFWALREVLLIHAGASLLRVFAALSGALLVGVPLGILIGRSQRVDRLLGPLLYFLYPI 96

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F P+ +      +L+      LL+       ++ ++    +  P+ + +V  ++  
Sbjct: 97  PKVAFLPVFMIFFGLGNLSK----VLLIFAVIVIQVIVSIRDAVTKIPSAYFQVMKNYTN 152

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                 R++ILP + P        + G A  +   +E       +  T G+G  I  +  
Sbjct: 153 QWRHVLRFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWS 206

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           K  +P+++ G+L++      L
Sbjct: 207 KMDYPQMLSGILLIALMGYLL 227



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 14/195 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +A  + LR+ +A+  +LL       L  +S+R+  +L P+L  +  IP + FL   +
Sbjct: 47  LLIHAGASLLRVFAALSGALLVGVPLGILIGRSQRVDRLLGPLLYFLYPIPKVAFLPVFM 106

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F            L+ +  IF   V  +  S+  ++  IP    +V +++        
Sbjct: 107 IFFGLG--------NLSKVLLIFAVIVIQVIVSIRDAVTKIPSAYFQVMKNYTNQWRHVL 158

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P  MP L  ++ +S+      +  +E            G+G  I  A  + D   
Sbjct: 159 RFVILPALMPALFASVRVSIGIALASLFFAE------NYNTTYGVGYLILSAWSKMDYPQ 212

Query: 241 ILYAMLTMLGVIFLY 255
           +L  +L +  + +L 
Sbjct: 213 MLSGILLIALMGYLL 227


>gi|146278349|ref|YP_001168508.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145556590|gb|ABP71203.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 278

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+I I+  L   +Q +     +V +    +      +   ++   +L A V  +     
Sbjct: 55  LLIIAILAGLAWYLQRSWRVAALVVVGFAFILNQGYWRETMQSLTLILLACVTCMAIGVP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL  V+ PILD+MQ++P   +L   +V+F     G V G     IF +   
Sbjct: 115 LGIAAAHRPRLYQVMSPILDLMQTLPTFVYLIPAIVFFGL---GMVPGLIATVIFVLPAP 171

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + + P  L+E + +F  +  Q+ W + +P++ P ++  +  ++     
Sbjct: 172 -----IRLTHLGVSSTPLALKEAATAFGATPRQRLWKVELPWAFPQIMTGLNQTIMLSLS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   +      +   ++ V  + D++L
Sbjct: 227 MVVIAALVGAN-------GLGVPVVRALNTVNTALGFESGFIIVVVAIILDRML 273



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 13/230 (5%)

Query: 346 IFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           +    ++ G+A  +  +W+    +V  F +            ++  +++  +    I +P
Sbjct: 55  LLIIAILAGLAWYLQRSWRVAALVVVGFAFILNQGYWRETMQSLTLILLACVTCMAIGVP 114

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP +   + P   L+   P  V+    +       +   +   + ++      
Sbjct: 115 LGIAAAHRPRLYQVMSPILDLMQTLPTFVYLIPAIVFFGLGMVPGLIATVIFVLPA---P 171

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S+ P   KE A++F  T  +    + LP  FP  +TG       + +  ++
Sbjct: 172 IRL-THLGVSSTPLALKEAATAFGATPRQRLWKVELPWAFPQIMTGLNQTIMLSLSMVVI 230

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +         I+    + L+R L
Sbjct: 231 AALVG-------ANGLGVPVVRALNTVNTALGFESGFIIVVVAIILDRML 273


>gi|313894852|ref|ZP_07828412.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976533|gb|EFR41988.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 247

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ + + +A  I  P+GI +G+ P I+  + P   L    P   F P+
Sbjct: 49  GVIAVHAGYSLMRIALGLSLAVAIGYPIGILMGYFPRINRILAPMLYLAYPVPKIAFLPV 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+  +            LL+     + ++  V    +  P    E       + W+  R+
Sbjct: 109 VMLLLGVGEAGK----ILLIFLIIVFQVVVAVRDATAGIPAATYEPLRVLGASFWQMVRH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P ++T    A   A +    +E            G+G YI ++  + ++ ++ 
Sbjct: 165 IVLPASLPKFITAVRIAMATAISVLFFTETFG------TKYGIGYYIMDAWLRVNYLDMY 218

Query: 557 LGVLIMCCFV 566
            G++ +    
Sbjct: 219 AGIVTLSGIG 228



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 14/189 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A  + +R+   + +++   +    L     R+  +L P+L +   +P + FL   ++  
Sbjct: 54  HAGYSLMRIALGLSLAVAIGYPIGILMGYFPRINRILAPMLYLAYPVPKIAFLPVVMLLL 113

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                GK        I  IF   V+ +  ++  +   IP    E  R    S WQ   ++
Sbjct: 114 GVGEAGK--------ILLIFLIIVFQVVVAVRDATAGIPAATYEPLRVLGASFWQMVRHI 165

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P  +  + ++M+       A  ++   +T     GIG YI  A    + L +  
Sbjct: 166 VLPASLPKFITAVRIAMA------TAISVLFFTETFGTKYGIGYYIMDAWLRVNYLDMYA 219

Query: 244 AMLTMLGVI 252
            ++T+ G+ 
Sbjct: 220 GIVTLSGIG 228


>gi|317404104|gb|EFV84556.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 275

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV     +A    IPVGI +G   +      P  +     P   + PL++    
Sbjct: 81  AMASLTRVFSAFFLACATAIPVGILMGVNRYARGIFDPPIEFYRPLPPLAYLPLIIIWFG 140

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                P + L  L IF     +     AG  +   +    A +   +  +   ++IL   
Sbjct: 141 IGEF-PKILLIYLAIFA---PMAIAARAGVRSVSIEQIHAAYAMGGSRMQIVWHVILKAA 196

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG     G  W   + +E+ +         GLG  +  + +  +   V++G++++
Sbjct: 197 MPEIFTGMRIGIGVGWTTLVAAEMVA------ADRGLGFMVLNAAQFLASDTVIMGIIVV 250

Query: 563 CCFVLALNRFL 573
             F  A +  +
Sbjct: 251 GVFAFAFDLLV 261



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 86/213 (40%), Gaps = 15/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++A  +  R+ SA  ++         L   +R    +  P ++  + +P L +L  
Sbjct: 75  STLAEHAMASLTRVFSAFFLACATAIPVGILMGVNRYARGIFDPPIEFYRPLPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E   I  I+ +    M  +    + ++  +    + +   S  Q
Sbjct: 135 IIIWFGIG--------EFPKILLIYLAIFAPMAIAARAGVRSVSIEQIHAAYAMGGSRMQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W++ +  +MP +   M + +  GW  +VA+EM+          G+G  +  A +    
Sbjct: 187 IVWHVILKAAMPEIFTGMRIGIGVGWTTLVAAEMVA------ADRGLGFMVLNAAQFLAS 240

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             ++  ++ +    F +D L+ R +  ++  ++
Sbjct: 241 DTVIMGIIVVGVFAFAFDLLV-RYLEKFAIPWK 272


>gi|187924082|ref|YP_001895724.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187715276|gb|ACD16500.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 290

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 100/255 (39%), Gaps = 13/255 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
               P          +  ++A V+   +    +        P  ++      ++  +L +
Sbjct: 31  QPRRPLLTRVDWRGAVLPVVAIVIWWAVSAAHVGKSGLLVSPAQVLATAWQQIESGALLK 90

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             S +  R  S  VI  L   +  ++   SR    ++ P  D  + I +  ++    V+F
Sbjct: 91  ALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWF 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV+   LAA+          +T      +  +PR   EVSR+FR S WQ    +
Sbjct: 151 GLGDVAKVVFLSLAALL--------PVTAHTCDGIHAVPRAYIEVSRAFRYSRWQLIRAV 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +++   W   + +E ++V  +     GIG+ +    ++  +  +L+
Sbjct: 203 ILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLF 257

Query: 244 AMLTMLGVIFLYDQL 258
            ++ +    +  + L
Sbjct: 258 GVIVIGVTGWALNAL 272



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 104/287 (36%), Gaps = 19/287 (6%)

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           LF++++       ++ +  +P S       R   + R  +    L + +         + 
Sbjct: 3   LFKRSSQPEKSAGAACDCSAPASFRRAAQPRRPLLTRVDWRGAVLPVVA--------IVI 54

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W+ V                V    +Q +    ++     ++ R     +I ++  + +G
Sbjct: 55  WWAVSAAHVGKSGLLVSPAQVLATAWQQIESGALLKALSASLAREASGFVIGTLGGLLLG 114

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF    +  I P            + PL+        +   ++LS          + 
Sbjct: 115 SVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLS----LAALLPVT 170

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +   G  A P  + EV+ +F  + W+  R +ILP   P   TG   A   +W A++ +E
Sbjct: 171 AHTCDGIHAVPRAYIEVSRAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE 230

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                   +  +G+G  + + +E+     V+ GV+++     ALN  
Sbjct: 231 YLL-----VAGSGIGNTLIDGSEQFRMDLVLFGVIVIGVTGWALNAL 272


>gi|13472447|ref|NP_104014.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14023193|dbj|BAB49800.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
          Length = 277

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 91/200 (45%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +   +T + +++A  +++         AA   ++  +++P+LD+MQ++P   +L  
Sbjct: 84  QNLWKQTVQTLVLVVAAAAMAMAIGVPLGIWAAHKPKVYRIMLPVLDLMQTLPTFVYLIP 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F     G   G  +  IF I T+         +  + ++P+ + E   +F  +  Q
Sbjct: 144 VLTLFGL---GNAPGLIVTIIFVIPTA-----VRLTHLGVVSVPKSIIEAGEAFGATKSQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  +  S+      VV + +I  G       G+G+ I  A+  + +
Sbjct: 196 LLWKVELPSALPTIMAGLTQSIMLSLSMVVFAALIGAG-------GLGTEINRALGSRRI 248

Query: 239 LAILYAMLTMLGVIFLYDQL 258
              L A L ++ +  + D++
Sbjct: 249 DLGLEAGLAIVVLAIVLDRM 268



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 92/279 (32%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRT----LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           IG    +FF  L++N   + R     L  I     +  L +        +  I W     
Sbjct: 8   IGAWGKSFFGFLTDNFDTIFRAFSNGLNFILDGLVDLLLLVPPVLLALVIAVIAWLLQRS 67

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                  +  + +I+N   ++  +        T+  VV    +A  I +P+GIW   +P 
Sbjct: 68  RPLAIGVFLGLIFIINQNLWKQTVQ-------TLVLVVAAAAMAMAIGVPLGIWAAHKPK 120

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   L+   P  V+   V++     +    +   + +I             G  
Sbjct: 121 VYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIVTIIFVIPTAVRL----THLGVV 176

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    E   +F  T  +    + LP   P  + G   +   + +  + + +   G   
Sbjct: 177 SVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLSMVVFAALIGAG--- 233

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  I  +         +   L +    + L+R 
Sbjct: 234 ----GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 268


>gi|118589797|ref|ZP_01547202.1| glycine betaine/l-proline transport system permease protein prow
           [Stappia aggregata IAM 12614]
 gi|118437883|gb|EAV44519.1| glycine betaine/l-proline transport system permease protein prow
           [Stappia aggregata IAM 12614]
          Length = 281

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ I   L + +  T     +V I  + +      +  + T   ++++ ++ +     
Sbjct: 54  LVMVAIFVALAYFVHRTITFAALVAIALLLIINQGYWEETTETLALVMASTIVCMAIGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +AA   R+  VL P+LD+MQ++P   +L   ++ F     G V G     IF+I   
Sbjct: 114 IGVVAAHHPRVYAVLRPVLDLMQTLPTFVYLIPALILFGL---GMVPGLIATVIFSIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E  ++F  +  Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTQLGVSSTPTSLLEAGKAFGATNSQLLWKIELPYALPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   ++     A + ++ +  + D+    P
Sbjct: 226 MVVIAALVA-------ADGLGVPVLRALNTANVALGFEAGVCIVLIAIVLDRFFRAP 275



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 68/191 (35%), Gaps = 11/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   I+   I +P+G+     P + + ++P   L+   P  V+    +  +  + 
Sbjct: 96  TLALVMASTIVCMAIGVPIGVVAAHHPRVYAVLRPVLDLMQTLPTFVYL---IPALILFG 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     L   +IF     I      G S+ P    E   +F  T  +    I LP   P 
Sbjct: 153 LGMVPGLIATVIFSIPAPIRL-TQLGVSSTPTSLLEAGKAFGATNSQLLWKIELPYALPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ + +         GLG  +  +    +        + +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVA-------ADGLGVPVLRALNTANVALGFEAGVCIVLI 264

Query: 566 VLALNRFLWHP 576
            + L+RF   P
Sbjct: 265 AIVLDRFFRAP 275


>gi|51892013|ref|YP_074704.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51855702|dbj|BAD39860.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 253

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 94/233 (40%), Gaps = 15/233 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+   +   L    L    + T  R+     +S +   +     A+SR L  +L P++
Sbjct: 35  PEDVALTLWRLLTSLELAVALTHTLKRIGLGFALSAVGGLLLGLAMARSRTLSDLLGPVV 94

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +QS+P + +    V++F           E A +F      ++ +  +    + NIP  
Sbjct: 95  QGLQSMPSICWYPLAVLWFGWN--------EGALLFVTTAGALFAVAAATESGVRNIPPS 146

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
               + +    GW+ +  + +P ++P L+  + +  S  W  ++A E++ +        G
Sbjct: 147 YVRAATTMGARGWRLYTRVVLPAALPSLLTGLRLGWSFAWRSLMAGELLFLN------LG 200

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-RPMIVWSNKFRLERTT 276
            G  +A+     D   ++  ++ +L V  + D+  F R       +F  ++  
Sbjct: 201 FGHLLAMGRDLGDASQVMAVIVVILAVGMVVDRACFSRAEAAVRVRFGYDKAA 253



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 89/256 (34%), Gaps = 20/256 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----------TMFR 389
             +   +    ++      + W  +         +DV   +W              T+ R
Sbjct: 2   ARWKAGLISAGLLLVAWQALCWTGLWPRYVFPWPEDVALTLWRLLTSLELAVALTHTLKR 61

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           + +   ++++  + +G+ +     +S  + P  Q L + P+  ++PL V    +      
Sbjct: 62  IGLGFALSAVGGLLLGLAMARSRTLSDLLGPVVQGLQSMPSICWYPLAVLWFGW----NE 117

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L  +   G  + +     +G    P  +   A++    GWR +  ++LP   P  +TG
Sbjct: 118 GALLFVTTAGALFAVAAATESGVRNIPPSYVRAATTMGARGWRLYTRVVLPAALPSLLTG 177

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  AW + +  E+           G G  +A   + G   +V+  ++++    + +
Sbjct: 178 LRLGWSFAWRSLMAGELL------FLNLGFGHLLAMGRDLGDASQVMAVIVVILAVGMVV 231

Query: 570 NRFLWHPLYLYGTRCL 585
           +R  +           
Sbjct: 232 DRACFSRAEAAVRVRF 247


>gi|311106074|ref|YP_003978927.1| taurine transporter permease TauC [Achromobacter xylosoxidans A8]
 gi|310760763|gb|ADP16212.1| taurine transport system permease protein TauC [Achromobacter
           xylosoxidans A8]
          Length = 275

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 21/242 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-----------YVIWLGCITMFRVV 391
           ++       +  +     W    ++ +     D              +      ++ RV 
Sbjct: 30  LITSLALIGLWFLVTSAGWVRPLFLPSPLAVYDKFVSAMTDGVANSTLTEHALASLSRVF 89

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A +  IPVGI +G   +      P  +     P   + PL++         P + 
Sbjct: 90  GAFFLACVTAIPVGILMGVNRYARGIFDPPIEFYRPLPPLAYLPLIIIWFGIGEF-PKVL 148

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  L IF     +     AG  +   +    A +   T  +   ++IL    P   TG  
Sbjct: 149 LIYLAIFA---PMAIAARAGVRSVSIEQIHAAYAMGGTPAQIVWHVILKAAMPEIFTGMR 205

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G  W   + +E+ +         GLG  +  + +  +   V++G++++  F  A + 
Sbjct: 206 IGIGVGWTTLVAAEMVA------ADRGLGFMVLNAAQFLASDTVIMGIIVIGVFAFAFDL 259

Query: 572 FL 573
            +
Sbjct: 260 LV 261



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 95/249 (38%), Gaps = 15/249 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F++        L       V    V  +   +   +L ++A  +  R+  A  ++ + 
Sbjct: 39  LWFLVTSAGWVRPLFLPSPLAVYDKFVSAMTDGVANSTLTEHALASLSRVFGAFFLACVT 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L   +R    +  P ++  + +P L +L   +++F           E   +  I
Sbjct: 99  AIPVGILMGVNRYARGIFDPPIEFYRPLPPLAYLPLIIIWFGIG--------EFPKVLLI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           + +    M  +    + ++  +    + +   +  Q  W++ +  +MP +   M + +  
Sbjct: 151 YLAIFAPMAIAARAGVRSVSIEQIHAAYAMGGTPAQIVWHVILKAAMPEIFTGMRIGIGV 210

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           GW  +VA+EM+          G+G  +  A +      ++  ++ +    F +D L+ R 
Sbjct: 211 GWTTLVAAEMVA------ADRGLGFMVLNAAQFLASDTVIMGIIVIGVFAFAFDLLV-RY 263

Query: 263 MIVWSNKFR 271
           +  ++  ++
Sbjct: 264 LEKFAIPWK 272


>gi|119961121|ref|YP_948272.1| ABC-type nitrate/sulfonate transport system, permease component
           [Arthrobacter aurescens TC1]
 gi|119947980|gb|ABM06891.1| putative ABC-type nitrate/sulfonate transport system, permease
           component [Arthrobacter aurescens TC1]
          Length = 259

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              +L   W+ +    A          ++         +      +++  + +   IA++
Sbjct: 15  TPVLLLAAWWFLSANSADPFFPPLETILIRFQELWLFDHFQSDVLLSLGNLFLGFAIAAV 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             I VG      P     I P    L   P     P+ +S + +            +   
Sbjct: 75  AGIGVGFVTALVPPARWMIDPLIHFLRGIPPVALVPIFISLIGFG----TQMRVTSIALA 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             +  +   + G  +  ND  +VA  + ++       ++LP   P   +G   +   A+ 
Sbjct: 131 ALFPTMIATVDGIRSVSNDLMDVARVYRLSRKERVLNVLLPAAMPQIFSGLQVSLQVAFI 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             I SE+         + G+GA    + +     ++  G+L++      +N   
Sbjct: 191 VMIASEMLG------SSQGIGAMTLLAQQSFMTADMWAGILLLGVIGFLVNILF 238



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 77/194 (39%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +     I+ +       + A       ++ P++  ++ IP +  +   +     
Sbjct: 59  LLSLGNLFLGFAIAAVAGIGVGFVTALVPPARWMIDPLIHFLRGIPPVALVPIFISLIGF 118

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               +V    LAA+F            +    + ++  DL +V+R +RLS  ++   + +
Sbjct: 119 GTQMRVTSIALAALF--------PTMIATVDGIRSVSNDLMDVARVYRLSRKERVLNVLL 170

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +S+   +  ++ASEM+          GIG+   LA +      +   +
Sbjct: 171 PAAMPQIFSGLQVSLQVAFIVMIASEMLGSSQ------GIGAMTLLAQQSFMTADMWAGI 224

Query: 246 LTMLGVIFLYDQLL 259
           L +  + FL + L 
Sbjct: 225 LLLGVIGFLVNILF 238


>gi|154174059|ref|YP_001407346.1| taurine transport system permease protein TauC [Campylobacter
           curvus 525.92]
 gi|112802434|gb|EAT99778.1| taurine transport system permease protein TauC [Campylobacter
           curvus 525.92]
          Length = 241

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 73/202 (36%), Gaps = 11/202 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R +  +++  I  + VG+  G  P ++S  +P   LL       + P  +     
Sbjct: 49  AASISRYIAGLVLGCIFAVTVGLVFGLFPSVASAFEPLIGLLRPISPIAWIPFALLAFGI 108

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++ +   + +L        + P +  + A  F  +  +    +ILP   
Sbjct: 109 GDK----PTIFIISYAVFFPMLLLTTNAVKSTPAELMQAARGFGASRLQTIIGVILPSSL 164

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              ++G   A   AW   +V E+          +GLG  I ++  +     V+  + ++ 
Sbjct: 165 FGIISGLKLAASLAWINLVVGEMVG------AQSGLGYLIIDARNQLRIDMVLAVIFVIG 218

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                +N F++  +  +    L
Sbjct: 219 VIGTWIN-FIFSLVERWAAARL 239



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 100/244 (40%), Gaps = 17/244 (6%)

Query: 26  VLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           +LV+  +  L  G        P D +  +   +   +L    + +  R ++ +V+  +F 
Sbjct: 7   ILVLAAVLALWQGFSGDLLPSPEDALTALLELIKSGNLATGIAASISRYIAGLVLGCIFA 66

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                +      +     P++ +++ I  + ++ F ++ F           +   IF I 
Sbjct: 67  VTVGLVFGLFPSVASAFEPLIGLLRPISPIAWIPFALLAFGIG--------DKPTIFIIS 118

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  + M      ++ + P +L + +R F  S  Q    + +P S+ G++  + ++ S  
Sbjct: 119 YAVFFPMLLLTTNAVKSTPAELMQAARGFGASRLQTIIGVILPSSLFGIISGLKLAASLA 178

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           W  +V  EM+          G+G  I  A  +  +  +L A++ ++GVI  +   +F  +
Sbjct: 179 WINLVVGEMVG------AQSGLGYLIIDARNQLRIDMVL-AVIFVIGVIGTWINFIFSLV 231

Query: 264 IVWS 267
             W+
Sbjct: 232 ERWA 235


>gi|300790341|ref|YP_003770632.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299799855|gb|ADJ50230.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 277

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 83/264 (31%), Gaps = 12/264 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
               ++  R    +  ++    L +   +  +      +F     +A   A        +
Sbjct: 8   GRVGRRAARGAATVVRNWLLFALLVVVWEFAARAGGSIFFPPPSEIAGTAAKLWFTGPAS 67

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H    D   V      ++ R +    +A+++ I +G+ +G        + P      + P
Sbjct: 68  HLFLTDA--VFDNVFPSLGRTLGGWALAAVVGIVIGVLLGRSATAMDYVGPLFAFFRSIP 125

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+                   +IFG  W +L N + G  +      E A SF   
Sbjct: 126 PPTLIPVFGVLFGLSSG----MQIGSIIFGAVWPVLLNTVDGVRSVDQVKVETARSFRTP 181

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
              W   ++LP   P    G   +   +    +VSE+           G+G  +  + + 
Sbjct: 182 KAYWLGMVVLPAAAPKIFAGLRVSLSISLLLMVVSELVG------AYNGIGRSLLNAQQD 235

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
             FP +   ++++       N   
Sbjct: 236 FDFPTMWSWLVLLGILGYVFNTIF 259



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 80/206 (38%), Gaps = 17/206 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R L    ++ +   V   L  +S      + P+    +SIP    +    V F  
Sbjct: 80  FPSLGRTLGGWALAAVVGIVIGVLLGRSATAMDYVGPLFAFFRSIPPPTLIPVFGVLFG- 138

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L  G  IG+       I    VW +  +    + ++ +   E +RSFR         + +
Sbjct: 139 LSSGMQIGS-------IIFGAVWPVLLNTVDGVRSVDQVKVETARSFRTPKAYWLGMVVL 191

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + +S+S     +V SE++   +      GIG  +  A ++ D   +   +
Sbjct: 192 PAAAPKIFAGLRVSLSISLLLMVVSELVGAYN------GIGRSLLNAQQDFDFPTMWSWL 245

Query: 246 LTMLGVIFLYDQLLF---RPMIVWSN 268
           + +  + ++++ +     R ++ W  
Sbjct: 246 VLLGILGYVFNTIFLAAERRVLAWQP 271


>gi|239814914|ref|YP_002943824.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801491|gb|ACS18558.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 270

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 88/231 (38%), Gaps = 16/231 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++D     +    L +  S +  R  +  VI      V   L   S     +  
Sbjct: 52  LVSPAKVLDTAIDQVTSGRLWRALSASLAREATGFVIGTASGLVLGALLGLSPLFNRIAG 111

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  +  + I +  ++    V+F      KV+   LAA+          +  +    +   
Sbjct: 112 PSFNTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALV--------PVVVNTCDGIRTA 163

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L EV+R +  + WQ    + +P ++P +   + +++   W   + +E ++V      
Sbjct: 164 PAGLLEVARVYGYTRWQTVTQVVLPAALPSIFTGVYLALIYSWLATIGAEYLLVAGR--- 220

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             GIG+ +    +   +  +++ M  +  V +L +   + L R +  W+ +
Sbjct: 221 --GIGNTLIEGSEHFQMDLVIFGMFVIGLVGWLMNASARALERRLARWTGR 269



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 71/202 (35%), Gaps = 12/202 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R     +I +   + +G  +G  P  +    P            + PL+       
Sbjct: 77  ASLAREATGFVIGTASGLVLGALLGLSPLFNRIAGPSFNTFKQISLFAWIPLISVWFGLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   ++LS          ++ N   G    P    EVA  +  T W+    ++LP   P
Sbjct: 137 DVAKVVFLS----LAALVPVVVNTCDGIRTAPAGLLEVARVYGYTRWQTVTQVVLPAALP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   +W A+I +E        +   G+G  + E +E      V+ G+ ++  
Sbjct: 193 SIFTGVYLALIYSWLATIGAEYLL-----VAGRGIGNTLIEGSEHFQMDLVIFGMFVIGL 247

Query: 565 FVLALN---RFLWHPLYLYGTR 583
               +N   R L   L  +  R
Sbjct: 248 VGWLMNASARALERRLARWTGR 269


>gi|120611705|ref|YP_971383.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120590169|gb|ABM33609.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 292

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 82/258 (31%), Gaps = 23/258 (8%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
              P         QR+   L          VA    W S   +       DVL   W   
Sbjct: 29  LPAPMRQWAAAVGQRLLPWLVPVALIAAWQVASAQGWLSSRVLPA---PSDVLKAAWQLG 85

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                     ++  R +  + I   + + +G+  G      + +    Q++   PA    
Sbjct: 86  ESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALI 145

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+     + I  N   G         E+  ++ ++ W+ +
Sbjct: 146 PLVILWFGI----DESAKVFLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLY 201

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LPG     + G   + G  W   IV+E  S         G+G     + E      
Sbjct: 202 REVVLPGAMSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDV 255

Query: 555 VVLGVLIMCCFVLALNRF 572
           V++G+L+        + F
Sbjct: 256 VLVGILLYALLGKLADVF 273



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 99/263 (37%), Gaps = 17/263 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASR 67
             + +R+ P     +A +    + +       +    P D++       +   L  +   
Sbjct: 38  AAVGQRLLP-WLVPVALIAAWQVASAQGWLSSRVLPAPSDVLKAAWQLGESGELWTHVKV 96

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R L+ + I      +   L    R    +L   + ++++IP L  +   +++F    
Sbjct: 97  SAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIPLVILWFGID- 155

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A +F I  S  + +  + +  + N+   L E+ R++ LS WQ +  + +P 
Sbjct: 156 -------ESAKVFLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYREVVLPG 208

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +M  ++  +  S+   W  ++ +E I          GIG     A +      +L  +L 
Sbjct: 209 AMSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVGILL 262

Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270
              +  L D    R +  W  ++
Sbjct: 263 YALLGKLADVF-ARGLEHWWLRW 284


>gi|302540867|ref|ZP_07293209.1| sulfonate ABC transporter, permease SsuC [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458485|gb|EFL21578.1| sulfonate ABC transporter, permease SsuC [Streptomyces
           himastatinicus ATCC 53653]
          Length = 309

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 13/250 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
             ++  V  +L  +       +   +    +  +           +      +  R  + 
Sbjct: 61  RRASGPVGLLLIWYLAAATGVLPETVLASPVDVVRRGADLIGTGELTEAIAASGRRAAIG 120

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +I + + + + +  G        I     +  A P     PL +               
Sbjct: 121 FLIGAAVALTLSLTAGLFRLGEDVIDASMGMFRAIPWVGLIPLFIVWFGI----DETPKI 176

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+  G  + + FN+  G  +      E      +      RY+ILP   P  + G   A
Sbjct: 177 ALVALGVTYPLYFNIYGGIRSADAQLIEAGRMVGLGRIGLIRYVILPSALPGALVGLRYA 236

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN--- 570
              AW A + +E  +         G+G  ++ + +      +VL + +     L  +   
Sbjct: 237 LSTAWLALVFAEQVN------ADAGIGYLMSNAQQYFQTDVIVLCLAVYAVLGLLCDFAV 290

Query: 571 RFLWHPLYLY 580
           R L   L  +
Sbjct: 291 RLLSRRLLDW 300



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 17/235 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V      +    L +  + +  R     +I        +  A   R    V+ 
Sbjct: 87  LASPVDVVRRGADLIGTGELTEAIAASGRRAAIGFLIGAAVALTLSLTAGLFRLGEDVID 146

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + + ++IP +G +   +V+F      K        I  +     + + F++Y  + + 
Sbjct: 147 ASMGMFRAIPWVGLIPLFIVWFGIDETPK--------IALVALGVTYPLYFNIYGGIRSA 198

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E  R   L       Y+ +P ++PG +  +  ++S  W  +V +E +        
Sbjct: 199 DAQLIEAGRMVGLGRIGLIRYVILPSALPGALVGLRYALSTAWLALVFAEQV------NA 252

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
             GIG  ++ A +      I+  +     +  L D   +LL R ++ W   F  E
Sbjct: 253 DAGIGYLMSNAQQYFQTDVIVLCLAVYAVLGLLCDFAVRLLSRRLLDWRASFEGE 307


>gi|268593374|ref|ZP_06127595.1| sulfonate ABC transporter, permease protein SsuC [Providencia
           rettgeri DSM 1131]
 gi|291311072|gb|EFE51525.1| sulfonate ABC transporter, permease protein SsuC [Providencia
           rettgeri DSM 1131]
          Length = 259

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G      + +    Q++   P     PLV+                L+  GT + I  N 
Sbjct: 84  GLSRLGETLLDSSIQMIRNIPHLALIPLVILWFGI----DEKAKIFLVSLGTFFPIYLNT 139

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           + G         E+A S+ + G++ + ++I PG  P  + G   + G  W   IV+E  S
Sbjct: 140 LHGIRHIDRGLIEMAKSYGLNGYQLFHHVIFPGALPSILVGIRFSLGLMWLTLIVAETIS 199

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                    G+G     + E      VV  +++     
Sbjct: 200 ------ANAGIGYLAMNAREFLRTDIVVFTIIVYALLG 231



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 105/269 (39%), Gaps = 18/269 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R +F +    LA +++                 P  +++     +    L +    +TLR
Sbjct: 5   RNLFLSWLVPLALLMIWQFSVNSGWVSNRILPEPLQVMNAGWRLIKSGELWENMVVSTLR 64

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                +I      +   +   SR    +L   + ++++IP L  +   +++F        
Sbjct: 65  ASIGFIIGGSIGLILGLITGLSRLGETLLDSSIQMIRNIPHLALIPLVILWFGID----- 119

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A IF +     + +  +    + +I R L E+++S+ L+G+Q F ++  P ++P 
Sbjct: 120 ---EKAKIFLVSLGTFFPIYLNTLHGIRHIDRGLIEMAKSYGLNGYQLFHHVIFPGALPS 176

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E I          GIG     A +      +++ ++    +
Sbjct: 177 ILVGIRFSLGLMWLTLIVAETISANA------GIGYLAMNAREFLRTDIVVFTIIVYALL 230

Query: 252 IFLYDQ---LLFRPMIVWSNKFRLERTTG 277
             + D    LL   ++ W   ++ ++   
Sbjct: 231 GKIADWSTYLLEVVLLRWHPTWQKKKVPA 259


>gi|120608758|ref|YP_968436.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120587222|gb|ABM30662.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 306

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 90/289 (31%), Gaps = 23/289 (7%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
                        +P              +R   P        + R   +  +  F ++ 
Sbjct: 12  LPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPS-RGLSVACVAAFALLW 70

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIW 401
            +A  + W    ++         L   W G I            +  RV    ++A++  
Sbjct: 71  WLATQLQWVKPLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVFGAFVLAALTA 130

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +PVGI +G          P  +     P   + PL+V               LL+     
Sbjct: 131 VPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGI----DETAKILLIYLACF 186

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I     AG  +   +    A S   + W+  R++I+P   P  + G   A G  W   
Sbjct: 187 APIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIGFGWTTL 246

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +E+ +       T G+G  +  ++       VV G+L++       +
Sbjct: 247 VAAEMVA------ATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFD 289



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 96/245 (39%), Gaps = 22/245 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-------LPQYASRTTLRMLS 74
           + AF L+   +   L  ++   +P     ++ +             L ++   + +R+  
Sbjct: 63  VAAFALLW-WLATQLQWVKPLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVFG 121

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A V++ L           SR    V  P ++  + +P L +L   V++F           
Sbjct: 122 AFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGID-------- 173

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A I  I+ +    +  +    + +   +    + S   S WQ   ++ VP ++P ++ 
Sbjct: 174 ETAKILLIYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILV 233

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++  GW  +VA+EM+          GIG  +  A        ++  +L +  V + 
Sbjct: 234 GLRIAIGFGWTTLVAAEMVA------ATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWT 287

Query: 255 YDQLL 259
           +D ++
Sbjct: 288 FDLVM 292


>gi|225420036|ref|ZP_03762339.1| hypothetical protein CLOSTASPAR_06379 [Clostridium asparagiforme
           DSM 15981]
 gi|225041292|gb|EEG51538.1| hypothetical protein CLOSTASPAR_06379 [Clostridium asparagiforme
           DSM 15981]
          Length = 260

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     ++ RV+    I + + + +G+ +G+   + +   P  +++   P   + P+ +
Sbjct: 61  LIMHVVYSLLRVMAGYFIGAAVGVVLGLSMGWSRLVEAVFSPVFRIIRPIPPIAWIPISI 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+   +  Y+  N  +GA     ++ + A        +    ++
Sbjct: 121 VWIGLGEG----AKVFLIFLASFCYVTLNAWSGAKNVNPEYIDAARMLGAGKRKILFTVV 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G   A    W   + +E+         + GLG  I          +++ G
Sbjct: 177 LPATIPPIFAGLQVALSSCWATVLAAEMVR------SSEGLGWIIIAGMNNNDMIQIMTG 230

Query: 559 VLIMCCFVLALNRFLWH 575
           +L +    + L+     
Sbjct: 231 ILAIGIVGMLLSTIFRK 247



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 96/237 (40%), Gaps = 20/237 (8%)

Query: 39  IQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
            +    P  ++     TL        +L  +   + LR+++   I      V       S
Sbjct: 34  GRLMPGPIPVLRKFFETLFGGRIGSKTLIMHVVYSLLRVMAGYFIGAAVGVVLGLSMGWS 93

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R +  V  P+  I++ IP + ++  ++V+            E A +F IF +    +T +
Sbjct: 94  RLVEAVFSPVFRIIRPIPPIAWIPISIVWIGLG--------EGAKVFLIFLASFCYVTLN 145

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +    N+  +  + +R       +  + + +P ++P +   + +++S  W  V+A+EM+
Sbjct: 146 AWSGAKNVNPEYIDAARMLGAGKRKILFTVVLPATIPPIFAGLQVALSSCWATVLAAEMV 205

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
              +      G+G  I   +   D++ I+  +L +  V  L    +FR +     ++
Sbjct: 206 RSSE------GLGWIIIAGMNNNDMIQIMTGILAIGIVGMLLST-IFRKVEARLCRW 255


>gi|90418107|ref|ZP_01226019.1| permease protein, ABC-type proline/glycine betaine transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337779|gb|EAS51430.1| permease protein, ABC-type proline/glycine betaine transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 295

 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 99/236 (41%), Gaps = 19/236 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  ++++GI+ +       T      +    I + V  + +   RT   ++   ++S++
Sbjct: 61  WIILLVIVGIVWLASRSKAITVGTFVAL----ILIGVFGMWEDTMRTLSIIVVCTLMSII 116

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  + ++S ++  V+ PILD+MQ++P   +L   V+         ++         
Sbjct: 117 IGMPIGIIMSRSNKVQAVINPILDVMQTMPSFVYLIPIVMLLGIGLIPGLL--------V 168

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +       +  + +++ E + +F  SGWQK   + +P ++P ++  +  ++ 
Sbjct: 169 VVIYAMPPIIRLTNLGIRLVDKEVLEAANAFGSSGWQKLTQVQLPLALPTIMAGINQTIM 228

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                VV + +I V        G+G  +  AI  Q     +   L ++ +  ++D+
Sbjct: 229 MALAMVVVASLIGV-------RGLGQPVLQAITNQYFTQGVLNGLAIVAIAIIFDR 277



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 99/276 (35%), Gaps = 18/276 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R I     +F     + ++ + R L      F    +Q      +  ++ I W       
Sbjct: 20  RTIDQYYRSFSRAYGDTIEAIFRPLLEFLLWFERLLIQTPWWIILLVIVGIVWLASRSKA 79

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                + ++  I     ++D +        T+  +VV  +++ II +P+GI +     + 
Sbjct: 80  ITVGTFVALILIGVFGMWEDTMR-------TLSIIVVCTLMSIIIGMPIGIIMSRSNKVQ 132

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + I P   ++   P+ V+   +V  +        +   L+++      I+     G    
Sbjct: 133 AVINPILDVMQTMPSFVYLIPIVMLLGIG----LIPGLLVVVIYAMPPIIRLTNLGIRLV 188

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             +  E A++F  +GW+    + LP   P  + G       A    +V+ +         
Sbjct: 189 DKEVLEAANAFGSSGWQKLTQVQLPLALPTIMAGINQTIMMALAMVVVASLIG------- 241

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             GLG  + ++     F + VL  L +    +  +R
Sbjct: 242 VRGLGQPVLQAITNQYFTQGVLNGLAIVAIAIIFDR 277


>gi|88601405|ref|YP_501583.1| binding-protein-dependent transport systems inner membrane
           component [Methanospirillum hungatei JF-1]
 gi|88186867|gb|ABD39864.1| binding-protein-dependent transport systems inner membrane
           component [Methanospirillum hungatei JF-1]
          Length = 261

 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 10/210 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             I+  +    V  +     ++M    + +  + ++ +P GI IG+ P ++  + P  ++
Sbjct: 44  DVIIAFYELLFVGTLPMDFAVSMIHFFIGLGFSLLVGVPAGILIGWYPVVNRLLDPIIEI 103

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P   + P  +       L        ++  G  + +L N   G    P  F E   
Sbjct: 104 IRPIPPLAWIPFAIVWFGLTDL----AAGFVIFIGAVFPVLINTYEGFRNIPRIFVEAGK 159

Query: 485 SFHI-TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                +     R+I +P   P+   G   A G AW   + +E+       +   GLG  I
Sbjct: 160 MLGCTSNAALIRFIAIPAALPHLAAGFRVASGVAWMCLVAAEMFG-----VSRFGLGQKI 214

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                     +V++ +LI+    L ++   
Sbjct: 215 WWYYNLHQMDKVMVYMLILGFIGLLIDYIF 244



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L V +LP   + + +     +  SLL       L      +  +L PI++I++ IP L +
Sbjct: 53  LFVGTLPMDFAVSMIHFFIGLGFSLLVGVPAGILIGWYPVVNRLLDPIIEIIRPIPPLAW 112

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL- 174
           + F +V+F           +LAA F IF   V+ +  + Y+   NIPR   E  +     
Sbjct: 113 IPFAIVWFGL--------TDLAAGFVIFIGAVFPVLINTYEGFRNIPRIFVEAGKMLGCT 164

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S      ++ +P ++P L     ++    W  +VA+EM  V        G+G  I     
Sbjct: 165 SNAALIRFIAIPAALPHLAAGFRVASGVAWMCLVAAEMFGV-----SRFGLGQKIWWYYN 219

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              +  ++  ML +  +  L D + 
Sbjct: 220 LHQMDKVMVYMLILGFIGLLIDYIF 244


>gi|300310979|ref|YP_003775071.1| alkanesulfonates ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073764|gb|ADJ63163.1| ABC-type alkanesulfonates transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 279

 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 12/265 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIG 365
           P++  V                          +  +L ++W        +   I  + + 
Sbjct: 7   PVAGRVAGPQEQAKPKAARKSFQPSHAWIGWLLPLLLLVWWEVAAQAGWLSSRILPEPLA 66

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   +       +     ++  R      + + + + +G+  G        +    Q++
Sbjct: 67  VLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAELLLDTTLQMV 126

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA    PLV+                L+  G  + +  N   G  +      E+A S
Sbjct: 127 RNIPALALIPLVILWFGI----DETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEMAKS 182

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           + ++GW  +R +ILPG  P  + G   A G  W   IV+E  S         G+G     
Sbjct: 183 YGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETIS------AQAGIGYMTMN 236

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN 570
           + E      V++G+L+        +
Sbjct: 237 AREFLQTDVVLVGILLYALLGKLAD 261



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 93/233 (39%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++           L ++ + ++ R  S   +      +   L+   R   ++L 
Sbjct: 61  LPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAELLLD 120

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A +F +     + +  + +  + ++
Sbjct: 121 TTLQMVRNIPALALIPLVILWFGID--------ETAKLFLVSVGVFFPVYLNTFHGIRSV 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L E+++S+ LSGW  +  + +P ++P ++  +  ++   W  ++ +E I        
Sbjct: 173 DQGLIEMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETIS------A 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             GIG     A +      +L  +L    +  L D   + L R  + W   ++
Sbjct: 227 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGYQ 279


>gi|33865950|ref|NP_897509.1| ABC transporter, nitrate-like [Synechococcus sp. WH 8102]
 gi|33633120|emb|CAE07931.1| ABC transporter, nitrate-like [Synechococcus sp. WH 8102]
          Length = 275

 Score =  103 bits (258), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 83/239 (34%), Gaps = 13/239 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L       +  V             +  +  +   +      +  RV    ++A++
Sbjct: 40  LIPLLAWAAIASLGLVDEKFLPSPGAVFRSLASMAESGILFQDIVASTGRVFAGFLLATV 99

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI +G  P + +  +P   +L   PA  F PL++  +             L+  G
Sbjct: 100 LAVPIGICMGVYPAVCALCEPLIAMLRYMPAAAFIPLLIIYLGIG----EEPKIALIFLG 155

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T ++ +  V+      P +  E   +      +    ++     P  +         +WN
Sbjct: 156 TIYFNILMVMDAVKFVPKELIETTLTLGGRSRQVLVKVVARYSLPSIIDTLRINIATSWN 215

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWH 575
             +V+E+ +         GLG  I  +       ++   ++++     A++   R L  
Sbjct: 216 LVVVAELVA------AEVGLGKRIQLAQRFFRTDQIFAELIVLGLIGFAIDMGFRLLLR 268



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 95/249 (38%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +    I ++ L   +    P  +   +    +   L Q    +T R+ +  +++ +
Sbjct: 40  LIPLLAWAAIASLGLVDEKFLPSPGAVFRSLASMAESGILFQDIVASTGRVFAGFLLATV 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                         +  +  P++ +++ +P   F+   ++Y            E   I  
Sbjct: 100 LAVPIGICMGVYPAVCALCEPLIAMLRYMPAAAFIPLLIIYLGIG--------EEPKIAL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   ++     +  ++  +P++L E + +      Q    +   +S+P ++  + ++++
Sbjct: 152 IFLGTIYFNILMVMDAVKFVPKELIETTLTLGGRSRQVLVKVVARYSLPSIIDTLRINIA 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  VV +E++          G+G  I LA +      I   ++ +  + F  D   +L
Sbjct: 212 TSWNLVVVAELVA------AEVGLGKRIQLAQRFFRTDQIFAELIVLGLIGFAIDMGFRL 265

Query: 259 LFRPMIVWS 267
           L R    W+
Sbjct: 266 LLRLSCRWA 274


>gi|319794601|ref|YP_004156241.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315597064|gb|ADU38130.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 257

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P     +  +  +   L   + +TTL  L    +++L     A + A SR +   + P
Sbjct: 37  LIPPPWEVVKQLVAEWPRLLSESWKTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYP 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L   QSIP +      VV+F      KVI A L   F         +  S      ++ 
Sbjct: 97  LLVFSQSIPKVAIAPLFVVWFGFGILPKVISAFLLGFF--------PVVVSTVMGFKSVE 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D+ +++RS   S  Q F+ + +P ++P +   + +S++      V  E +         
Sbjct: 149 PDMLDLARSMGASRLQTFFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVGSNS----- 203

Query: 223 PGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSNKFR 271
            GIG  + +A    DL  +  A++    +  V+F+   L+ R MI W    R
Sbjct: 204 -GIGYVLQVANGNFDLPLMFAALVVLSSIGVVLFVAVDLVERLMIPWHASQR 254



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T    +    +  +I IP+ + I +   + S + P      + P    
Sbjct: 50  AEWPRLLSESWKTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAI 109

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V    +  L   +   LL  F     ++ + + G  +   D  ++A S   +  + 
Sbjct: 110 APLFVVWFGFGILPKVISAFLLGFF----PVVVSTVMGFKSVEPDMLDLARSMGASRLQT 165

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I LP   P   +G   +   A   ++V E           +G+G  +  +      P
Sbjct: 166 FFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVG------SNSGIGYVLQVANGNFDLP 219

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    + L
Sbjct: 220 LMFAALVVLSSIGVVL 235


>gi|91776210|ref|YP_545966.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
 gi|91710197|gb|ABE50125.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacillus flagellatus KT]
          Length = 321

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S++ +P+GI  G          PF +     PA  F  L V+ +  Y 
Sbjct: 127 SIQLIAYAFLISSLVGVPLGILAGTWSVAGRLCLPFIEFFRYLPAPAFGALAVAVLGIYE 186

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +   + W+  R++++PG+ P 
Sbjct: 187 GPK----IAIIVIGTFFQQVLIISNTTRQLDYALLEAAMTLGTSRWKLLRHVVIPGVLPQ 242

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   + I+   
Sbjct: 243 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYEHFDNVYAAIFIIGVI 296

Query: 566 VLALNRFL-W--HPLYLY 580
            L+ +  L W    L+ +
Sbjct: 297 GLSTDMLLAWLGKRLFPW 314



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 14/214 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P+  D   L Q   ++   +  A +IS L       LA      G + +P ++
Sbjct: 105 YSAFTTPPVQRDGLWLHQSLWQSIQLIAYAFLISSLVGVPLGILAGTWSVAGRLCLPFIE 164

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I     +     +  +   +   L
Sbjct: 165 FFRYLPAPAFGALAVAVLGIYEGPK--------IAIIVIGTFFQQVLIISNTTRQLDYAL 216

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   S W+   ++ +P  +P L  +  + +   W +++ +E+I          GI
Sbjct: 217 LEAAMTLGTSRWKLLRHVVIPGVLPQLYRDQRILLGWAWTYLIVAELIGTSS------GI 270

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +I    + +    +  A+  +  +    D LL
Sbjct: 271 TWFITQQARYEHFDNVYAAIFIIGVIGLSTDMLL 304


>gi|27464137|gb|AAO15989.1|AF514870_5 Abc2 [Lactobacillus plantarum]
          Length = 337

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G     +    P+ +++   PA  + PL +      ++        L+ F   + + F 
Sbjct: 167 MGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFM 222

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G      ++ E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+ 
Sbjct: 223 TIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMI 282

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                     GLG +I  +   G++ +V   ++IM   
Sbjct: 283 G------AKVGLGWFINWAKGTGNYTQVYAAIVIMAIL 314



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  ++V  ++      +++         +  +  +   L      +    L + VI  +
Sbjct: 99  LVGLLIVQDLLTEKFAVLEQPFFVSFAQILDQMRENAGLLWASTLSSLALWLISFVIGTI 158

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +      + R       P L ++  IP   ++  T+V F          + +A +F 
Sbjct: 159 LGILLGLGMGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIF--------PTSYMAEVFL 210

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + + F     +  I ++  E +++   S WQ    + +P ++P +   +  +M 
Sbjct: 211 IAFSVWFPVAFMTIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMG 270

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +  +V SEMI          G+G +I  A    +   +  A++ M  +  + 
Sbjct: 271 LSFTMLVISEMIGAKV------GLGWFINWAKGTGNYTQVYAAIVIMAILFSVL 318


>gi|29840506|ref|NP_829612.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
 gi|29834855|gb|AAP05490.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
          Length = 610

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 88/245 (35%), Gaps = 20/245 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLR-MLSA 75
            L + L I +  +              +   P  +     D  +L   +S  TLR +L  
Sbjct: 5   FLCYFLTISLFILFWEFFARNNASFSFLCPPPSKIAANFSDSMNLILSSSWYTLRGILGG 64

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             ++L  +     L    +    +L P   ++Q  P+       V++F            
Sbjct: 65  FFLALFLSIGLVILMLTCKLAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL-------- 116

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A I     +  + +T ++YQ + + P +L E     + +  Q F  L +P ++P +   
Sbjct: 117 NAVIVPTALTVFFPLTITIYQGITSTPPELLEQFTLHQATKRQAFIKLRLPHALPHIFSG 176

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++M    F  +A E +          G+G  I  + +  D+      +  +  V F+ 
Sbjct: 177 LKIAMGSAGFAAIAGEWVA------SQSGLGILILESRRNYDMEMTFSGLFALTTVTFIL 230

Query: 256 DQLLF 260
            Q + 
Sbjct: 231 FQGIL 235



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  ++    +A  + I + I +         + PF  L+   P     PL+V    +  
Sbjct: 57  TLRGILGGFFLALFLSIGLVILMLTCKLAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +  +L + F     +   +  G ++ P +  E  +    T  + +  + LP   P+
Sbjct: 117 NAVIVPTALTVFF----PLTITIYQGITSTPPELLEQFTLHQATKRQAFIKLRLPHALPH 172

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   A G A  A+I  E  +        +GLG  I ES           G+  +   
Sbjct: 173 IFSGLKIAMGSAGFAAIAGEWVA------SQSGLGILILESRRNYDMEMTFSGLFALTTV 226

Query: 566 VLAL 569
              L
Sbjct: 227 TFIL 230


>gi|192362263|ref|YP_001982784.1| AtsB [Cellvibrio japonicus Ueda107]
 gi|190688428|gb|ACE86106.1| AtsB [Cellvibrio japonicus Ueda107]
          Length = 284

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 91/244 (37%), Gaps = 13/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +   +W  +   V   I         +     +   +     I++FR+     I ++
Sbjct: 42  LALLWLWYWATLQQWVPEQILPSPALVWASFVELAESGELQDNLSISLFRLFSGFGIGAV 101

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + VG+ +   P + + +    +LL   P  V  P+++  +         +  ++++  
Sbjct: 102 AGVIVGVLLAISPQVRAYLGLTFELLRHIPTLVMVPMLILLLGIGET----FKIVILVKA 157

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +           P  F EV   + +     +R I+LP   P  +TG   A G AW 
Sbjct: 158 VFFPVAQAATDAVRNIPRGFIEVGRVYQLKPLALYRDILLPATVPPVLTGMRIALGRAWL 217

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHP 576
             +  E+ +        TG+G  +  + +      V++GV++       L+   R L H 
Sbjct: 218 ILVAVELLA------ADTGIGQMMEFARQMLRLDIVLVGVVLTGLIGFGLDKSLRLLEHR 271

Query: 577 LYLY 580
           L  +
Sbjct: 272 LMRW 275



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 99/255 (38%), Gaps = 24/255 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYASRTTLRMLS 74
           L A++  + ++ +      +  VP  I+    +         +   L    S +  R+ S
Sbjct: 35  LAAWISPLALLWLWYWATLQQWVPEQILPSPALVWASFVELAESGELQDNLSISLFRLFS 94

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I  +   +   L A S ++   L    ++++ IP L  +   ++        K++  
Sbjct: 95  GFGIGAVAGVIVGVLLAISPQVRAYLGLTFELLRHIPTLVMVPMLILLLGIGETFKIVIL 154

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A  F +  +           ++ NIPR   EV R ++L     +  + +P ++P ++ 
Sbjct: 155 VKAVFFPVAQAA--------TDAVRNIPRGFIEVGRVYQLKPLALYRDILLPATVPPVLT 206

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            M +++   W  +VA E++          GIG  +  A +   L  +L  ++    + F 
Sbjct: 207 GMRIALGRAWLILVAVELLAADT------GIGQMMEFARQMLRLDIVLVGVVLTGLIGFG 260

Query: 255 YD---QLLFRPMIVW 266
            D   +LL   ++ W
Sbjct: 261 LDKSLRLLEHRLMRW 275


>gi|312139029|ref|YP_004006365.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888368|emb|CBH47680.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 285

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 97/260 (37%), Gaps = 22/260 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--------DVH 59
           P +   R  P    L   +LV  ++         T +  + V   P+ +           
Sbjct: 23  PAYRRHRSRPAWLSLPLRLLVPAVLVAGWWIGSATGLISEAVLASPVKVWDAFVELYSTG 82

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  ++  +  R    +    +   V   L+  S     ++   + I +++P L  +   
Sbjct: 83  QLVDFSLASLQRAAIGVFFGTVIGLVLGVLSGLSTLGEELIDSTMQINRAVPFLALVPLF 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           E   +  I  + V  M    Y  + N+ R + E +R F L+GW+ 
Sbjct: 143 IAWFGID--------ETFKVVLIAVATVAPMYAYTYLGVRNVDRKMVEAARGFGLTGWRL 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                +P ++PG++  + + +S     ++A+E +          GIG  + LA +     
Sbjct: 195 VAEAILPAALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTD 248

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            ++  ++    +  ++D ++
Sbjct: 249 YMVLCVVLYAALGLVFDAIV 268



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 85/291 (29%), Gaps = 21/291 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +  +  +   P +        T    R      +L L     V  +L   W+       I
Sbjct: 1   MTATLKDAGRPSAAAAGLELETPAYRRHRSRPAWLSLPLRLLVPAVLVAGWWIGSATGLI 60

Query: 358 GIAWQSIGYIV--NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
             A  +    V            ++     ++ R  + +   ++I + +G+  G      
Sbjct: 61  SEAVLASPVKVWDAFVELYSTGQLVDFSLASLQRAAIGVFFGTVIGLVLGVLSGLSTLGE 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             I    Q+  A P     PL ++           +  +L+   T   +      G    
Sbjct: 121 ELIDSTMQINRAVPFLALVPLFIAWFGI----DETFKVVLIAVATVAPMYAYTYLGVRNV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                E A  F +TGWR     ILP   P  + G       +    I +E          
Sbjct: 177 DRKMVEAARGFGLTGWRLVAEAILPAALPGVLMGLRICLSLSITGLIAAEQVG------T 230

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---------WHPL 577
             G+G  +  + E      +VL V++     L  +  +         W  L
Sbjct: 231 REGIGYLVTLAQEYNRTDYMVLCVVLYAALGLVFDAIVRVVERFAMPWRRL 281


>gi|284920785|emb|CBG33848.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Escherichia coli 042]
          Length = 264

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRRLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 89/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRRLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|124023400|ref|YP_001017707.1| glycine/bertaine ABC transporter permease [Prochlorococcus marinus
           str. MIT 9303]
 gi|123963686|gb|ABM78442.1| ABC transporter,membrane component, glycine betaine/proline family
           protein [Prochlorococcus marinus str. MIT 9303]
          Length = 304

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L Q    T   +++A +++L+        +A+ + +  +  P+LD+MQ++P   +L   
Sbjct: 93  GLWQPMISTLALVIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPA 152

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F            + +  A     +  +    Y  +  +P DL E  R+F  S  Q 
Sbjct: 153 VMFFGTGL--------VPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQL 204

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P L+  +  ++      VV + MI  G            +   I++ D+ 
Sbjct: 205 LWKVQLPNALPTLMAGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLDVG 257

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D+L
Sbjct: 258 LGFEGGLAVVILAVILDRL 276



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
           +S         ++  +A      S   +        +   +W   I T+  V+   ++A 
Sbjct: 54  LSVPAPWLLAPLIAILAAWRVSLSFAILSLLGLNLVLFMGLWQPMISTLALVIAASLLAL 113

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II IP+GI+   R HI +  +P   L+   PA V+    V       +   +   +    
Sbjct: 114 IIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPAVMFFGTGLVPSTIATLIF--- 170

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
            +   ++     G    P D  E   +F  +  +    + LP   P  + G       A 
Sbjct: 171 -SMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQLLWKVQLPNALPTLMAGVNQTIMLAL 229

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +++ +   G +          +    ++        G L +    + L+R 
Sbjct: 230 SMVVIASMIGGGGLGDV-------VLRGIQQLDVGLGFEGGLAVVILAVILDRL 276


>gi|187919744|ref|YP_001888775.1| choline ABC transporter permease [Burkholderia phytofirmans PsJN]
 gi|187718182|gb|ACD19405.1| choline ABC transporter, permease protein [Burkholderia
           phytofirmans PsJN]
          Length = 300

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    LS+ +ISLL         AKSR + M++ P+LD+MQ++P   +L    + F    
Sbjct: 91  TLGLTLSSTLISLLLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+V G     IFA+  +            + ++ R++ E  ++F  +  Q  + +  P 
Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTSLGIKHVNREIVEAGQAFGCTPLQLLYKVQFPN 202

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      V+ + M+  G       G+G+ +  +I+  D+     + L+
Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLS 255

Query: 248 MLGVIFLYDQL 258
           ++ +  + D++
Sbjct: 256 VVMLAIILDRI 266



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 75/247 (30%), Gaps = 11/247 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              E+F  +  +   +  +       V      + W+   + +                I
Sbjct: 31  KVIESFAAVIEHGLQAVPMWALMAFFVGIGLWRVGWRFALFTLLAMLLIYGTGFWDQMVI 90

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   +I+ ++ +P+GIW      +   ++P   L+   PA V+            
Sbjct: 91  TLGLTLSSTLISLLLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGR 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L   +  +             G      +  E   +F  T  +    +  P   P 
Sbjct: 151 VPGILSTVIFAMPPAVRL----TSLGIKHVNREIVEAGQAFGCTPLQLLYKVQFPNALPS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       A +  I++ +   G       GLG  +  S ++          L +   
Sbjct: 207 IMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGLSVVML 259

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 260 AIILDRI 266


>gi|121607614|ref|YP_995421.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552254|gb|ABM56403.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 254

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 17/232 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P     +     +   L   + +TTL  L    ++++     A L A SR +   + P
Sbjct: 37  LIPPPWEVVKQFVAEWPRLLSESWKTTLATLGGFGLTIVIGIPIAMLIAYSRLVESYVYP 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L   QSIP +      VV+F      KVI A L   F         +  S      ++ 
Sbjct: 97  LLVFSQSIPKVAIAPLFVVWFGFGILPKVISAFLLGFF--------PVVVSTVMGFKSVE 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D+ +++RS   S  Q F+ + +P ++P +   + +S++      V  E +         
Sbjct: 149 PDMLDLARSMGASRLQTFFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVGANS----- 203

Query: 223 PGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSNKFR 271
            GIG  + +A    DL  +  A++    +  ++F+   L+ R MI W    R
Sbjct: 204 -GIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLIERSMIPWHASQR 254



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T    +    +  +I IP+ + I +   + S + P      + P    
Sbjct: 50  AEWPRLLSESWKTTLATLGGFGLTIVIGIPIAMLIAYSRLVESYVYPLLVFSQSIPKVAI 109

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V    +  L   +   LL  F     ++ + + G  +   D  ++A S   +  + 
Sbjct: 110 APLFVVWFGFGILPKVISAFLLGFF----PVVVSTVMGFKSVEPDMLDLARSMGASRLQT 165

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I LP   P   +G   +   A   ++V E           +G+G  +  +      P
Sbjct: 166 FFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVG------ANSGIGYVLQVANGNFDLP 219

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    + L
Sbjct: 220 LMFAALVVLSSIGVIL 235


>gi|110804943|ref|YP_688463.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110614491|gb|ABF03158.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|332759022|gb|EGJ89332.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 4343-70]
 gi|332760120|gb|EGJ90418.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 2747-71]
 gi|332762707|gb|EGJ92970.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-671]
 gi|332767721|gb|EGJ97912.1| ssuC [Shigella flexneri 2930-71]
 gi|333006195|gb|EGK25704.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-218]
 gi|333019980|gb|EGK39251.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri K-304]
          Length = 217

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 73/208 (35%), Gaps = 19/208 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+     
Sbjct: 17  AISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI 76

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++G   + ++ILP   
Sbjct: 77  ----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDAL 132

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 133 PSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 186

Query: 564 CFV-------LALNRFL--WHPLYLYGT 582
                       L R    W+P Y    
Sbjct: 187 LLGKLADVSAQLLERLWLRWNPAYHLKE 214



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 17/217 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      +   ++  SR    +L   + +++++P L  +   +++
Sbjct: 14  QHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E A IF +    ++ +  + +  + NI R L E++RS+ LSG   F +
Sbjct: 74  FGID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIH 125

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  ++   W  ++ +E I          GIG     A +      ++
Sbjct: 126 VILPDALPSIMVGVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVV 179

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
            A++    +  L D   QLL R  + W+  + L+  T
Sbjct: 180 VAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEAT 216


>gi|324009885|gb|EGB79104.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 264

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +   +  ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQMDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQMDVVVVAIILYALLGKLAD 240


>gi|239814868|ref|YP_002943778.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801445|gb|ACS18512.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 257

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 17/243 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + I L  I    +P     +  +  +   L   + +TTL  L    +++L     A + A
Sbjct: 26  VAIRLFRIPAYLIPPPWEVVKQLVAEWPRLLAESWKTTLATLGGFGLTILIGIPIAMVIA 85

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            SR +   + P+L   QSIP +      VV+F      KVI A L   F         + 
Sbjct: 86  YSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFLLGFF--------PVV 137

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            S      ++  D+ +++RS   S  Q F+ + +P +MP +   + +S++      V  E
Sbjct: 138 VSTVMGFKSVEPDMLDLARSMGASRLQTFFKISLPQAMPAIFSGLKVSVTLAVVGAVVGE 197

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSN 268
            +          GIG  + +A    DL  +  A++    +  ++F+   ++ R MI W  
Sbjct: 198 FVGSNS------GIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDIVERVMIPWHA 251

Query: 269 KFR 271
             R
Sbjct: 252 SQR 254



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T    +    +  +I IP+ + I +   + S + P      + P    
Sbjct: 50  AEWPRLLAESWKTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAI 109

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V    +      +   LL  F     ++ + + G  +   D  ++A S   +  + 
Sbjct: 110 APLFVVWFGFGIFPKVISAFLLGFF----PVVVSTVMGFKSVEPDMLDLARSMGASRLQT 165

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  I LP   P   +G   +   A   ++V E           +G+G  +  +      P
Sbjct: 166 FFKISLPQAMPAIFSGLKVSVTLAVVGAVVGEFVG------SNSGIGYVLQVANGNFDLP 219

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    + L
Sbjct: 220 LMFAALVVLSSIGVIL 235


>gi|88807960|ref|ZP_01123471.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 7805]
 gi|88787999|gb|EAR19155.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. WH 7805]
          Length = 298

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +++A +++L+       L+A+ R +  ++ P LD+MQ++P   +L   
Sbjct: 89  QLWNEMIATLALVITASLLALVIGLPLGILSARYRSVWRLVRPCLDLMQTMPAFVYLIPA 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + +I A     +  +       L  +P DL E  RSF  S  Q 
Sbjct: 149 VMLFSTG--------AVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQL 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  ++      VV + MI  G            +   I++ D+ 
Sbjct: 201 LWKVQMPSALPTVMTGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLDVG 253

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 + ++ +  + D+L
Sbjct: 254 LGFEGGIAVVILAVILDRL 272



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIP 403
            W       AIG+   S G+ +      +++  + L      T+  V+   ++A +I +P
Sbjct: 55  AWLLAWSVAAIGLWRVSGGFALFVLLGLNLVLSLQLWNEMIATLALVITASLLALVIGLP 114

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI       +   ++P   L+   PA V+    V   S   +   L   +     +   
Sbjct: 115 LGILSARYRSVWRLVRPCLDLMQTMPAFVYLIPAVMLFSTGAVPSILATLIF----SMPP 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G S  P D  E   SF  +  +    + +P   P  +TG       A +  ++
Sbjct: 171 VVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSALPTVMTGVNQTIMLALSMVVI 230

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G +          +    ++        G + +    + L+R 
Sbjct: 231 ASMIGGGGLGDV-------VLRGIQQLDVGLGFEGGIAVVILAVILDRL 272


>gi|94310314|ref|YP_583524.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93354166|gb|ABF08255.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Cupriavidus metallidurans CH34]
          Length = 268

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVI 380
           P       + + ++  +      VV  VA    W S   +           T      + 
Sbjct: 9   PRRIDWRQAARAIAPWIVPILLIVVWQVASQAGWLSNRVLPAPLAVVEAAWTLAASGELW 68

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               I+ +R +V + I   + + +G+  G     ++ +    Q++   P     PLV+  
Sbjct: 69  KHVWISTWRALVGLAIGGGLGLVLGLLTGTFRTAATLLDSTLQMVRNIPPLALIPLVILW 128

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L+  G  + +  N   G  A      E+A S+ ++GWR +R +ILP
Sbjct: 129 FGI----DETAKLFLVALGVFFPVYLNTYHGIRAVDPALVEMARSYGLSGWRLYREVILP 184

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  + G   + G  W   IV+E  S        +G+G     + E      V++G+L
Sbjct: 185 GALPGILVGVRFSLGLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGIL 238

Query: 561 IMCCFVLALNRF 572
           +        +  
Sbjct: 239 LYALLGKLADVL 250



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 18/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        +  ++V  + +       +    P  +V+          L ++   +T R 
Sbjct: 19  RAIAPWIVPILLIVVWQVASQAGWLSNRVLPAPLAVVEAAWTLAASGELWKHVWISTWRA 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  + I      V   L    R    +L   L ++++IP L  +   +++F         
Sbjct: 79  LVGLAIGGGLGLVLGLLTGTFRTAATLLDSTLQMVRNIPPLALIPLVILWFGID------ 132

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  +  +   L E++RS+ LSGW+ +  + +P ++PG+
Sbjct: 133 --ETAKLFLVALGVFFPVYLNTYHGIRAVDPALVEMARSYGLSGWRLYREVILPGALPGI 190

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S+   W  ++ +E I          GIG     A +      +L  +L    + 
Sbjct: 191 LVGVRFSLGLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLG 244

Query: 253 FLYDQL---LFRPMIVWSNKF 270
            L D L   L R  + W   +
Sbjct: 245 KLADVLSRALERHWLRWHPGY 265


>gi|300311644|ref|YP_003775736.1| taurine ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300074429|gb|ADJ63828.1| ABC-type taurine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 293

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++   +IA ++ IPVG+ +G    +   +    +     P   + PL++  +  
Sbjct: 100 GASLLRILTAGVIAVLLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLGI 159

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L+L M       ++ +  AG  + P +    A S   T W+    ++LP   
Sbjct: 160 GEASKITLLTLAMFA----PVVLSAQAGVRSLPQERVNAALSLGATRWQLLTEVVLPSAL 215

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +         G+G  I  ++   +   V +G+ ++ 
Sbjct: 216 PEILTGIRIALGVGWSTLVAAELIA------SNRGIGYMIMSASHFLATDAVFVGIALIA 269

Query: 564 CFVLALN---RFLWHPLYLY 580
               A +   R L   L  +
Sbjct: 270 TCAFAFSYGMRLLERALVPW 289



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 90/214 (42%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   + LR+L+A VI++L       L   +R +  VL   ++    +P L +L  
Sbjct: 93  ATLAEHVGASLLRILTAGVIAVLLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPL 152

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +  +    +  S    + ++P++    + S   + WQ
Sbjct: 153 MIIWLGIG--------EASKITLLTLAMFAPVVLSAQAGVRSLPQERVNAALSLGATRWQ 204

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +++  GW  +VA+E+I          GIG  I  A      
Sbjct: 205 LLTEVVLPSALPEILTGIRIALGVGWSTLVAAELIASN------RGIGYMIMSASHFLAT 258

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            A+   +  +    F +    +LL R ++ W  K
Sbjct: 259 DAVFVGIALIATCAFAFSYGMRLLERALVPWKGK 292


>gi|27377947|ref|NP_769476.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351093|dbj|BAC48101.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 269

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 14/246 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           +   F  L F+++   + I L  I    +P     I  +  +   L + +  TT   +  
Sbjct: 18  WVRPFLFLVFIVIAWDLAIRLFRIPAYQIPSPGDVIAVLRTEWPELLRQSWPTTYATVCG 77

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            ++S LF    A L A S+ +   + P+L   QS+P +      VV+F      KVI A 
Sbjct: 78  FLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGIIPKVISAF 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L   F +  S V        Q   ++  D+ +++R+ + S +Q F  + +P ++P +   
Sbjct: 138 LLGFFPVVVSAV--------QGFKSVDPDMVDLARAMQGSRFQVFRAVNLPHALPAIFSG 189

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S++      V  E +          GIG  +  +I   DL  +  A++ +  +  + 
Sbjct: 190 LKVSVTLAVVGAVVGEFVGSNS------GIGYVMQRSIGTFDLPTMFAALVILALLGVVL 243

Query: 256 DQLLFR 261
             ++ R
Sbjct: 244 FWIVDR 249



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T +  V   +++++  IPV + I     + S + P      + P    
Sbjct: 58  TEWPELLRQSWPTTYATVCGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAI 117

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V    +  +   +   LL  F     ++ + + G  +   D  ++A +   + ++ 
Sbjct: 118 APLFVVWFGFGIIPKVISAFLLGFF----PVVVSAVQGFKSVDPDMVDLARAMQGSRFQV 173

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R + LP   P   +G   +   A   ++V E           +G+G  +  S      P
Sbjct: 174 FRAVNLPHALPAIFSGLKVSVTLAVVGAVVGEFVG------SNSGIGYVMQRSIGTFDLP 227

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++I+    + L
Sbjct: 228 TMFAALVILALLGVVL 243


>gi|296269532|ref|YP_003652164.1| binding-protein-dependent transporter inner membrane component
           [Thermobispora bispora DSM 43833]
 gi|296092319|gb|ADG88271.1| binding-protein-dependent transport systems inner membrane
           component [Thermobispora bispora DSM 43833]
          Length = 301

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV + +   +++   + +  G      S I    Q+  A P     PL++  +  
Sbjct: 106 LTSLQRVGLGLAFGTVLGTVLAVVSGLSRWGESIIDGPVQIKRAIPTLALMPLLILWLGI 165

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +  G   +I      G  +  + + E+A +  +T   + R ++LPG  
Sbjct: 166 GEG----MKITTITLGVLVHIYIQTHNGLRSIDSRYVELAETLRLTHRDFIRKVVLPGAL 221

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++ G   A   AW    V E  +       T+G+G  +  +   G    + +G+++  
Sbjct: 222 PGFLIGMRFAVTAAWLFLAVVEQIN------STSGIGYMMDLARSYGQTDVIFVGIVLYG 275

Query: 564 CFVLALN---RFLWHPLYLY 580
              L  +   R +      +
Sbjct: 276 LLGLVSDAAVRLVQRRALAW 295



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       ++   L +    +  R+   +    +   V A ++  SR    ++ 
Sbjct: 82  LPAPWTIAGTAIDLIESGRLQENLLTSLQRVGLGLAFGTVLGTVLAVVSGLSRWGESIID 141

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + I ++IP L  +   +++       K        I  I    + ++    +  L +I
Sbjct: 142 GPVQIKRAIPTLALMPLLILWLGIGEGMK--------ITTITLGVLVHIYIQTHNGLRSI 193

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++ + RL+       + +P ++PG +  M  +++  W F+   E I        
Sbjct: 194 DSRYVELAETLRLTHRDFIRKVVLPGALPGFLIGMRFAVTAAWLFLAVVEQI------NS 247

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             GIG  + LA        I   ++    +  + D   +L+ R  + W
Sbjct: 248 TSGIGYMMDLARSYGQTDVIFVGIVLYGLLGLVSDAAVRLVQRRALAW 295


>gi|291455459|ref|ZP_06594849.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291358408|gb|EFE85310.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 278

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 21/265 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P    +      +  +  +          I  A  +I  +           +    
Sbjct: 24  RSRVPRWVRRTSGPLLLLALWQVLSGTGALPADILAAPGTIARVA--VDLVADGSLPSAM 81

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV V +++  ++ I + +  G        +    Q+L   P     PL +     
Sbjct: 82  AVSLQRVAVGLLLGLVVGIGLALVSGLFRVGEDLVDASVQMLRTVPFVGLIPLFIIWFGI 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++  G  + +  NV AG         E   S  ++ W   R+++LPG  
Sbjct: 142 GEA----PKVAIITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGAL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G AW A + +E  +         G+G  + ++ +      +V+ +++  
Sbjct: 198 PGAMTGLRYSLGIAWLALVFAEQVN------ADAGIGYLMVQARDFLRTDVIVVCLIVYA 251

Query: 564 CFVLA-------LNRFL--WHPLYL 579
              L        L R L  W P + 
Sbjct: 252 FLGLLADFAVRTLERLLLQWRPTFT 276



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I  +    +   SLP   + +  R+   +++ L+     A ++   R    ++ 
Sbjct: 58  LAAPGTIARVAVDLVADGSLPSAMAVSLQRVAVGLLLGLVVGIGLALVSGLFRVGEDLVD 117

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++F           E   +  I    ++ +  ++Y  +  +
Sbjct: 118 ASVQMLRTVPFVGLIPLFIIWFGIG--------EAPKVAIITMGVMFPLYLNVYAGIRGV 169

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  LS W    ++ +P ++PG +  +  S+   W  +V +E +        
Sbjct: 170 DAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSLGIAWLALVFAEQV------NA 223

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             GIG  +  A        I+  ++    +  L D     L R ++ W   F
Sbjct: 224 DAGIGYLMVQARDFLRTDVIVVCLIVYAFLGLLADFAVRTLERLLLQWRPTF 275


>gi|242242091|ref|ZP_04796536.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
 gi|242234456|gb|EES36768.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
          Length = 504

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A+ I+ L     A L  K+++L  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLFSTIIEHIQLSFIALFIATLIAVPLAILLTKTKKLSEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------RLPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  ++D  + R M   S K
Sbjct: 173 DRNNSALILIGAIPAAFLAIIFD-FILRYMERLSYK 207



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA++I +P+ I +     +S  +   A +L   P+     L++       L   +
Sbjct: 27  FIALFIATLIAVPLAILLTKTKKLSEIVMNIAAVLQTIPSLALLGLMIPIFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPLRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNSALILIGAIPAAFLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
            F+   +     + L
Sbjct: 196 -FILRYMERLSYKKL 209


>gi|153953662|ref|YP_001394427.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219854284|ref|YP_002471406.1| hypothetical protein CKR_0941 [Clostridium kluyveri NBRC 12016]
 gi|146346543|gb|EDK33079.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219568008|dbj|BAH05992.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 275

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 74/190 (38%), Gaps = 11/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           +++ R ++  ++A++I +P+G  +G     +   + P  Q+LA        P+ +     
Sbjct: 79  VSLMRAIIGFMLAAVIALPLGFLLGGGFKKVEEFLDPLLQILAQVNPFSLLPVFILLFGI 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +    ++ + + W ILF+ I G         + A +   +  + +  IILPG  
Sbjct: 139 G----EVAKISIIFWVSIWPILFSTITGVKTIDPLLIKAARAMGTSKVKLFWKIILPGSA 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   + G A+   I +E+         + GLG  +  S        +      + 
Sbjct: 195 PNIFAGLKLSSGNAFLMLIAAEMIG------ASAGLGWMVLNSEVNFQINRLFAAAFTIA 248

Query: 564 CFVLALNRFL 573
              + +N+ +
Sbjct: 249 VLGILINKTI 258



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 19/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVISL 80
           ++ F++   I  I+     +              L   + +  +   + +R +   +++ 
Sbjct: 33  IVLFLVFWQIAPIVGIADHQFIPTFSETISTIWDLIFKNEMIVHVKVSLMRAIIGFMLAA 92

Query: 81  LFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +       L     +++   L P+L I+  +     L   ++ F           E+A I
Sbjct: 93  VIALPLGFLLGGGFKKVEEFLDPLLQILAQVNPFSLLPVFILLFGIG--------EVAKI 144

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF   +W + FS    +  I   L + +R+   S  + FW + +P S P +   + +S
Sbjct: 145 SIIFWVSIWPILFSTITGVKTIDPLLIKAARAMGTSKVKLFWKIILPGSAPNIFAGLKLS 204

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
               +  ++A+EMI          G+G  +  +     +  +  A  T+  +  L +   
Sbjct: 205 SGNAFLMLIAAEMIGASA------GLGWMVLNSEVNFQINRLFAAAFTIAVLGILINKTI 258

Query: 257 QLLFRPMIVWSN 268
             + R +IVW  
Sbjct: 259 TFIERKVIVWKE 270


>gi|78212611|ref|YP_381390.1| ABC transporter, nitrate-like [Synechococcus sp. CC9605]
 gi|78197070|gb|ABB34835.1| ABC transporter, nitrate-like [Synechococcus sp. CC9605]
          Length = 275

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 13/207 (6%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           +  +   +      +  RV    ++A+++ +P+GI +G  P I +  +P   +L   PA 
Sbjct: 72  SMAESGILFQDIVASTGRVFGGFLLATLLAVPIGICMGVYPAICAICEPLIAMLRYMPAA 131

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F PL++  +             L+  GT ++ +  V+      P +  E   +      
Sbjct: 132 AFIPLLIIYLGIG----EEPKIALIFLGTIYFNILMVMDAVKFVPKELIETTLTLGGRSR 187

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    ++     P  +         +WN  +V+E+ +         GLG  I  +     
Sbjct: 188 QVLVQVVARYSLPSIIDTLRINIATSWNLVVVAELVA------AEVGLGKRIQLAQRFFR 241

Query: 552 FPEVVLGVLIMCCFVLALN---RFLWH 575
             ++   ++++     A++   R L  
Sbjct: 242 TDQIFAELIVLGLIGFAIDMGFRLLLR 268



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 99/251 (39%), Gaps = 15/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +L   I ++ L   +    P+ +   +    +   L Q    +T R+    +++ L
Sbjct: 40  LVPLLLWTAIASLGLVDEKFLPSPQAVFRSLASMAESGILFQDIVASTGRVFGGFLLATL 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                         +  +  P++ +++ +P   F+   ++Y            E   I  
Sbjct: 100 LAVPIGICMGVYPAICAICEPLIAMLRYMPAAAFIPLLIIYLGIG--------EEPKIAL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF   ++     +  ++  +P++L E + +      Q    +   +S+P ++  + ++++
Sbjct: 152 IFLGTIYFNILMVMDAVKFVPKELIETTLTLGGRSRQVLVQVVARYSLPSIIDTLRINIA 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  VV +E++          G+G  I LA +      I   ++ +  + F  D + FR
Sbjct: 212 TSWNLVVVAELVA------AEVGLGKRIQLAQRFFRTDQIFAELIVLGLIGFAID-MGFR 264

Query: 262 PMIVWSNKFRL 272
            ++  S K+ +
Sbjct: 265 LLLRLSCKWAV 275


>gi|70730544|ref|YP_260285.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344843|gb|AAY92449.1| ABC transporter, permease protein, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 253

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 13/192 (6%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P     +  R    +++  L   +   L A S     ++ P+   ++ +P+LG++    +
Sbjct: 55  PVNLLASLGRASGGLLLGTLAGVMLGALMALSTLANRLIGPLFHSIRQVPMLGWIPLIAM 114

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F N    K++   LAA +         M  + YQ LC + R   EV +   L+  Q+  
Sbjct: 115 WFGNGEFSKMLIVSLAAFY--------PMVLNTYQGLCQVERRYREVGQVLVLNPAQRLR 166

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P ++P +   ++ +++  W   V SE+ +         G+G+ +  A     +  I
Sbjct: 167 HILLPAALPSIATGLLQALAFAWVTAVGSELFLSSGA-----GLGNLMMNAEAGSRMEVI 221

Query: 242 LYAMLTMLGVIF 253
           +  +L +    +
Sbjct: 222 VLCVLCIGLCGY 233



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 9/183 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R    +++ ++  + +G  +      +  I P    +   P   + PL+      
Sbjct: 59  LASLGRASGGLLLGTLAGVMLGALMALSTLANRLIGPLFHSIRQVPMLGWIPLIAMWFGN 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      L++     + ++ N   G       ++EV     +   +  R+I+LP   
Sbjct: 119 GEFSKM----LIVSLAAFYPMVLNTYQGLCQVERRYREVGQVLVLNPAQRLRHILLPAAL 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG + A   AW  ++ SE+           GLG  +  +        +VL VL + 
Sbjct: 175 PSIATGLLQALAFAWVTAVGSELFLSSG-----AGLGNLMMNAEAGSRMEVIVLCVLCIG 229

Query: 564 CFV 566
              
Sbjct: 230 LCG 232


>gi|309388584|gb|ADO76464.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 246

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 92/231 (39%), Gaps = 14/231 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           M+    + +     I          + +F+ + +L+++    ++ +R++  + I+ ++ +
Sbjct: 17  MIWYLLYFIFDSAIISSPTAVFKVFITNFSSEIMLHLL----MSFYRIITAVTISLVLGV 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G +  I + + P   LL   P   F P+ +       L+  + L +++IF    
Sbjct: 73  GIGLLMGMQHRIDNFLAPIIYLLYPIPKIAFLPVFMLLFGLADLSKIILLIVIIIFQ--- 129

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+     G     + +   A S  +     + +++LP I P  +T      G +     
Sbjct: 130 -IIVTTRDGVKGIDSRYFASARSLGMDKIDIYYHLVLPAILPGILTALRITIGTSIAVLF 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E            G+G YI  S    ++ ++  G++ +      L + +
Sbjct: 189 FAE------NFAVKYGIGYYIMNSWSMVNYLKMYSGIIAVSLLGYLLFKLI 233



 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 102/244 (41%), Gaps = 16/244 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--VHSLPQYASRTTLRMLSA 75
           N F  L  +++I +I  LL+ I ++ +      +  + +      +  +   +  R+++A
Sbjct: 4   NKFKDLYALILIIMIWYLLYFIFDSAIISSPTAVFKVFITNFSSEIMLHLLMSFYRIITA 63

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + ISL+       L     R+   L PI+ ++  IP + FL   ++ F          A+
Sbjct: 64  VTISLVLGVGIGLLMGMQHRIDNFLAPIIYLLYPIPKIAFLPVFMLLFGL--------AD 115

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+ I  +    ++ +  +    +  I       +RS  +     +++L +P  +PG++  
Sbjct: 116 LSKIILLIVIIIFQIIVTTRDGVKGIDSRYFASARSLGMDKIDIYYHLVLPAILPGILTA 175

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +++      +  +E   V        GIG YI  +    + L +   ++ +  + +L 
Sbjct: 176 LRITIGTSIAVLFFAENFAVK------YGIGYYIMNSWSMVNYLKMYSGIIAVSLLGYLL 229

Query: 256 DQLL 259
            +L+
Sbjct: 230 FKLI 233


>gi|239815951|ref|YP_002944861.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239802528|gb|ACS19595.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 284

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 80/241 (33%), Gaps = 17/241 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVV 391
           R+   L      V   +A  + W S   +          + + +         ++  R +
Sbjct: 33  RLVPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDVVKAAWALAVSGELWTHVKVSAGRAL 92

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             + I     + +G+  G      + +    Q++   PA    PLV+             
Sbjct: 93  AGLAIGGGTGLVLGLLTGSVKFFETLLDSTIQMVRNIPALALIPLVILWFGI----DESA 148

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+     + I  N   G         E+  ++ ++ W+ +R +ILPG     + G  
Sbjct: 149 KLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVILPGALSSILVGLR 208

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + G  W   IV+E  S         G+G     + E      V++G+L+        + 
Sbjct: 209 FSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDIVLVGILLYALLGKLADL 262

Query: 572 F 572
           F
Sbjct: 263 F 263



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 100/265 (37%), Gaps = 17/265 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYA 65
               ++ R+ P     +  ++   I + L     +    P D+V           L  + 
Sbjct: 26  FGASVAVRLVP-WLVPVGLIVFWQIASSLGWLSTRVLPAPVDVVKAAWALAVSGELWTHV 84

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R L+ + I      V   L    +    +L   + ++++IP L  +   +++F  
Sbjct: 85  KVSAGRALAGLAIGGGTGLVLGLLTGSVKFFETLLDSTIQMVRNIPALALIPLVILWFGI 144

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A +F I  S  + +  + +  + N+   L E+ R++ LS WQ +  + +
Sbjct: 145 D--------ESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVIL 196

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  S+   W  ++ +E I          GIG     A +      +L  +
Sbjct: 197 PGALSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDIVLVGI 250

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
           L    +  L D L  R +  W  ++
Sbjct: 251 LLYALLGKLAD-LFARGLEQWWLRW 274


>gi|114562993|ref|YP_750506.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella frigidimarina NCIMB 400]
 gi|114334286|gb|ABI71668.1| binding-protein-dependent transport systems inner membrane
           component [Shewanella frigidimarina NCIMB 400]
          Length = 283

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LVI +  ++   +    +         I + +         T   + S++V   +    
Sbjct: 54  LLVIALFGVIAWRVSGFKLA-GFTLASLILIGLLGFWSETMITLAMVFSSVVFCTVVGVP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   A +S R+  +L PILD MQ+ P   +L   V+ F             A + A    
Sbjct: 113 FGIWAGRSDRVNNILRPILDAMQTTPAFVYLVPIVMLFSIGNT--------AGVLATIIF 164

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +  +L E + +F  +  Q    + +P ++P ++  +  ++     
Sbjct: 165 ALPPLVRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G+ + L +   D+       L ++ +  + D++
Sbjct: 225 MVVIAAMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            +V  +   IAW+  G+ +  FT   ++ +  LG      IT+  V   ++  +++ +P 
Sbjct: 54  LLVIALFGVIAWRVSGFKLAGFTLASLILIGLLGFWSETMITLAMVFSSVVFCTVVGVPF 113

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GIW G    +++ ++P    +   PA V+   +V   S  +    L   +         +
Sbjct: 114 GIWAGRSDRVNNILRPILDAMQTTPAFVYLVPIVMLFSIGNTAGVLATIIF----ALPPL 169

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E A +F  T  +    + +P   P  + G       + +  +++
Sbjct: 170 VRLTSLGIRQVHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLSMVVIA 229

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLGA +             +G L +    + L+R 
Sbjct: 230 AMIGAG-------GLGAPVVLGLNTLDIGLATVGGLAIVLLAIILDRI 270


>gi|95930516|ref|ZP_01313251.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
 gi|95133351|gb|EAT15015.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
          Length = 269

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 9/202 (4%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +++ R +    +A++  I  G+       + +   P  QLL   P   + P+ +    
Sbjct: 67  MAVSLTRWLDAFALATLCGISYGLLSSRWNGLHTLTAPIPQLLLLIPGLAWIPVAILIFG 126

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       ++       I    I G       +   A     T    +  ++LP  
Sbjct: 127 IGEG----ATRFMIAMTAFAPIALATINGIKGVNIHYIRAAQMLGATPTTLFFQVLLPSA 182

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++G     G +W   + +E+          +GLG  I E+     +P  +  V+I+
Sbjct: 183 LPALISGLRIGLGNSWRVLVAAEMVVG-----TGSGLGFSIIEARWSLDYPSALACVVII 237

Query: 563 CCFVLALNRFLWHPLYLYGTRC 584
           C   L L   L  PL       
Sbjct: 238 CLIGLILEYGLIRPLEKRTLER 259



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 105/265 (39%), Gaps = 20/265 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-------TLDV 58
           ++ P   +R++  I   L  V +  I    +  ++    P  +V +  +        L  
Sbjct: 1   MMSPTWKQRLWRMIGPTLLIVALWQITAWGVTNLRGVPFPTPLVTLQRLMELFANQPLAG 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           +SL  + + +  R L A  ++ L    Y  L+++   L  +  PI  ++  IP L ++  
Sbjct: 61  YSLYHHMAVSLTRWLDAFALATLCGISYGLLSSRWNGLHTLTAPIPQLLLLIPGLAWIPV 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F           E A  F I  +    +  +    +  +       ++    +   
Sbjct: 121 AILIFGIG--------EGATRFMIAMTAFAPIALATINGIKGVNIHYIRAAQMLGATPTT 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P ++P L+  + + +   W  +VA+EM+V   +     G+G  I  A    D 
Sbjct: 173 LFFQVLLPSALPALISGLRIGLGNSWRVLVAAEMVVGTGS-----GLGFSIIEARWSLDY 227

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPM 263
            + L  ++ +  +  + +  L RP+
Sbjct: 228 PSALACVVIICLIGLILEYGLIRPL 252


>gi|134297071|ref|YP_001120806.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134140228|gb|ABO55971.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 292

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 87/283 (30%), Gaps = 24/283 (8%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--------VCGVAIGIAW 361
            N      R     R+  P        +      L   W+          +   A    W
Sbjct: 18  GNRPAPQRRVRASHRYRLPGQGNTSALSAATLAALAALWWIATHRQWLPPLFLPAPEAVW 77

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++      H   Q  L +      +  RV      A+ I +P GI +G        + P 
Sbjct: 78  RAF-VDAAHGRIQGGLPLSEHLMWSAARVFGAFAFATAIGVPAGILMGVSRIARGVLDPL 136

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +     P   + PLVV               +++       I     AG  A   +   
Sbjct: 137 LEFYRPLPPLAYLPLVVIWFGI----DETAKLVVIFLACFAPIAMAARAGVRAATVEQIN 192

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S      +  R+++LP   P  +TG   A G  W   + +E+ +       T GLG 
Sbjct: 193 AAYSLGGNFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQ 246

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +  ++       VV+G+LI+       +  +      +  R 
Sbjct: 247 MVLNASSFLRTDIVVMGILIIGAIAWLFDLAM-----RWVERR 284



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A   +         L   SR    VL P+L+  + +P L +L   V
Sbjct: 94  LSEHLMWSAARVFGAFAFATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   +  Q  
Sbjct: 154 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGNFAQIV 205

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 206 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 259

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R  + W  +
Sbjct: 260 VVMGILIIGAIAWLFDLAMRWVERRAVPWKGR 291


>gi|325570088|ref|ZP_08146013.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156916|gb|EGC69087.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 513

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 16/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++     A      +R   V + I  ++Q+IP L  L  
Sbjct: 13  GELLTAVFEHLSLSIIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +     P         A+ A+    +  +  + Y  L  I   +EE + +F +S  +
Sbjct: 73  LIPFVGIGTPP--------ALIALVIYALLPIFQNTYIGLSEIDPSIEEAAAAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  +  ++         + +I  G       G+GS+I L I     
Sbjct: 125 RLIKVELPIALPVIISGIRTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
              L   +    +  ++  L+ R +     ++ L
Sbjct: 178 ELTLIGAIGSALLAIIFSTLI-RYLQHLKPRYTL 210



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A +I +P+ IW+      +        +L   P+     L++  V        +
Sbjct: 27  IIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGLLIPFVGIGTPPALI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G S      +E A++F ++  R    + LP   P  ++G 
Sbjct: 87  ALVIYALL----PIFQNTYIGLSEIDPSIEEAAAAFGMSRMRRLIKVELPIALPVIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG++I    ++ +    ++G +      +  +
Sbjct: 143 RTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAPELTLIGAIGSALLAIIFS 195

Query: 571 RFL 573
             +
Sbjct: 196 TLI 198


>gi|148238699|ref|YP_001224086.1| ABC-type glycine betaine/L-proline transport system permease
           protein ProW [Synechococcus sp. WH 7803]
 gi|147847238|emb|CAK22789.1| ABC-type glycine betaine/L-proline transport system permease
           protein ProW [Synechococcus sp. WH 7803]
          Length = 298

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +++A +++L+       L+A+   +  V+ P LD+MQ++P   +L   
Sbjct: 89  QLWNAMIATLALVITASLLALVIGLPLGILSARYSSVWRVVRPCLDLMQTMPAFVYLIPA 148

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + +I A     +  +       L  +P DL E  RSF  S  Q 
Sbjct: 149 VMLFSTG--------AVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQL 200

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  ++      VV + MI  G            +   I++ D+ 
Sbjct: 201 LWKVQMPSALPTVMTGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLDVG 253

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 + ++ +  + D+L
Sbjct: 254 LGFEGGIAVVILAVILDRL 272



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 11/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V+   ++A +I +P+GI       +   ++P   L+   PA V+    V   S
Sbjct: 94  MIATLALVITASLLALVIGLPLGILSARYSSVWRVVRPCLDLMQTMPAFVYLIPAVMLFS 153

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +   L   +     +   ++     G S  P D  E   SF  +  +    + +P  
Sbjct: 154 TGAVPSILATLIF----SMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSA 209

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TG       A +  +++ +   G +          +    ++        G + +
Sbjct: 210 LPTVMTGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLDVGLGFEGGIAV 262

Query: 563 CCFVLALNRF 572
               + L+R 
Sbjct: 263 VILAVILDRL 272


>gi|110641130|ref|YP_668860.1| alkanesulfonate transporter permease subunit [Escherichia coli 536]
 gi|191172134|ref|ZP_03033678.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli F11]
 gi|215486059|ref|YP_002328490.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218557839|ref|YP_002390752.1| alkanesulfonate transporter permease subunit [Escherichia coli S88]
 gi|218704364|ref|YP_002411883.1| alkanesulfonate permease [Escherichia coli UMN026]
 gi|293409312|ref|ZP_06652888.1| ssuC [Escherichia coli B354]
 gi|300983007|ref|ZP_07176411.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|301023062|ref|ZP_07186869.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|306812612|ref|ZP_07446805.1| alkanesulfonate transporter permease subunit [Escherichia coli
           NC101]
 gi|312969000|ref|ZP_07783207.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 2362-75]
 gi|331682445|ref|ZP_08383064.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli H299]
 gi|110342722|gb|ABG68959.1| putative aliphatic sulfonates transport permease protein
           [Escherichia coli 536]
 gi|190907661|gb|EDV67256.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli F11]
 gi|215264131|emb|CAS08475.1| alkanesulfonate transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|218364608|emb|CAR02294.2| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218431461|emb|CAR12339.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222032665|emb|CAP75404.1| aliphatic sulfonates transport permease protein ssu [Escherichia
           coli LF82]
 gi|291469780|gb|EFF12264.1| ssuC [Escherichia coli B354]
 gi|300307024|gb|EFJ61544.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300397183|gb|EFJ80721.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|305853375|gb|EFM53814.1| alkanesulfonate transporter permease subunit [Escherichia coli
           NC101]
 gi|307627638|gb|ADN71942.1| alkanesulfonate transporter permease subunit [Escherichia coli
           UM146]
 gi|312286402|gb|EFR14315.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli 2362-75]
 gi|312945454|gb|ADR26281.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|320196571|gb|EFW71194.1| Alkanesulfonates transport system permease protein [Escherichia
           coli WV_060327]
 gi|324012923|gb|EGB82142.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|325496872|gb|EGC94731.1| alkanesulfonate transporter permease subunit [Escherichia
           fergusonii ECD227]
 gi|331080076|gb|EGI51255.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli H299]
          Length = 263

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 89/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|325972404|ref|YP_004248595.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027642|gb|ADY14401.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 242

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 10/222 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R S ++ I W+ +   +   I        V   +             +++R+ + + +A 
Sbjct: 5   RGSLVVLIGWYLLALLMHSPIIPYPHAVFVFLLSTMQTTKTYLHLLFSLYRIAMGMALAL 64

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              IP G+  G +  +   I P   LL   P   F P+ +       L+  + +++++ F
Sbjct: 65  FFAIPTGMVAGRKKRLDQFISPVLYLLYPLPKIAFLPVFMVLFGIGDLSKIILIAVIVFF 124

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I      G    P  + E+A ++ +T  +    I+ P I P   +      G + 
Sbjct: 125 PAAVTI----RDGVKEIPMQYLELAKAYRLTPRQVITDIVWPAILPRIFSSLRITLGISL 180

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           +   +SE       +  T GLG YI  +     +  +  G++
Sbjct: 181 SVLFISE------NYAATYGLGYYIMNNWVMAHYVGMYAGIV 216



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 72/183 (39%), Gaps = 14/183 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +  R+   M ++L F      +A + +RL   + P+L ++  +P + FL   +V F
Sbjct: 48  HLLFSLYRIAMGMALALFFAIPTGMVAGRKKRLDQFISPVLYLLYPLPKIAFLPVFMVLF 107

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      +L+ I  I     +    ++   +  IP    E+++++RL+  Q    +
Sbjct: 108 GIG--------DLSKIILIAVIVFFPAAVTIRDGVKEIPMQYLELAKAYRLTPRQVITDI 159

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P  +P +  ++ +++      +  SE            G+G YI         + +  
Sbjct: 160 VWPAILPRIFSSLRITLGISLSVLFISE------NYAATYGLGYYIMNNWVMAHYVGMYA 213

Query: 244 AML 246
            ++
Sbjct: 214 GIV 216


>gi|160900069|ref|YP_001565651.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160365653|gb|ABX37266.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 283

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 15/265 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
                + RR+ P +  L    +            +    P D++       +   L ++ 
Sbjct: 27  RFAAGVGRRLVPWLVPLALIAVWQAASAWGWLSTRVLPAPLDVLRAAQALAESGELLKHV 86

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R L  + I          L    R    +L   + ++++IP L  +   +++F  
Sbjct: 87  QVSAGRALGGLAIGGGLGLALGLLTGSLRWAETLLDSTIQMVRNIPALALIPLVILWFGI 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A +F I  S  + +  + +  + N+   L E+ RS+ L+ WQ +  + +
Sbjct: 147 D--------ESAKLFLISVSVFFPIYLNTFHGIRNVDPALIEMGRSYGLTRWQLYREVIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  S+   W  ++ +E I          GIG     A +      +L  +
Sbjct: 199 PGALSSILVGLRFSLGLMWVILIVAETIS------AQSGIGYLTMNAREFLQTDVVLVGI 252

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
           L    +  L D    R +  W  ++
Sbjct: 253 LLYALLGKLADWF-ARALEHWWLRW 276



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--- 372
                       P         +R+   L       V   A    W S   +        
Sbjct: 12  ASSAPPAGDAWSPLLRFAAGVGRRLVPWLVPLALIAVWQAASAWGWLSTRVLPAPLDVLR 71

Query: 373 ----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 +   ++    ++  R +  + I   + + +G+  G      + +    Q++   
Sbjct: 72  AAQALAESGELLKHVQVSAGRALGGLAIGGGLGLALGLLTGSLRWAETLLDSTIQMVRNI 131

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PLV+                L+     + I  N   G         E+  S+ +
Sbjct: 132 PALALIPLVILWFGI----DESAKLFLISVSVFFPIYLNTFHGIRNVDPALIEMGRSYGL 187

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+ +R +ILPG     + G   + G  W   IV+E  S        +G+G     + E
Sbjct: 188 TRWQLYREVILPGALSSILVGLRFSLGLMWVILIVAETIS------AQSGIGYLTMNARE 241

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
                 V++G+L+        + F
Sbjct: 242 FLQTDVVLVGILLYALLGKLADWF 265


>gi|189351630|ref|YP_001947258.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|189335652|dbj|BAG44722.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 297

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A++I +P GI +G        + P  +     P   + PLVV       
Sbjct: 106 SAARVFGAFLLATVIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 163

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 164 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSLAQIVRHVVLPAALPE 221

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 222 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 275

Query: 566 VLALN 570
               +
Sbjct: 276 AWLFD 280



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++ +       L   SR    VL P+L+  + +P L +L   V
Sbjct: 99  LSEHLLWSAARVFGAFLLATVIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 158

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 159 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSLAQIV 210

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 211 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 264

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 265 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 296


>gi|227511900|ref|ZP_03941949.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227084876|gb|EEI20188.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 512

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                   L +++I+++     A  A   R    + +    IMQ+IP L  L        
Sbjct: 20  LMEHVYLTLISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAIL-------G 72

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P   IG++ A I  +    +  +  + Y +L  I  +L E +  F L+ WQ+ + + 
Sbjct: 73  ILIPIVGIGSKPAIIALVIYGIL-PIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIE 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S   ++  +  S          + +I  G       G+G++I L I   +    L  
Sbjct: 132 LPLSKDSILTGIKTSTVLIIGTATLAALIGAG-------GLGTFILLGIDRSNTALTLTG 184

Query: 245 MLTMLGVIFLYDQLLFR 261
            +    +  ++  L+ R
Sbjct: 185 AIGSALLAVVFSWLITR 201



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +IIA +I IP+ ++       +     F  ++   P+     +++  V     
Sbjct: 24  VYLTLISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGILIPIVGIGSK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  I      I  N     +    +  E A  F +T W+    I LP      
Sbjct: 84  PAIIALVIYGIL----PIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG  T+       + ++ +   G       GLG +I    ++ +    + G +      
Sbjct: 140 LTGIKTSTVLIIGTATLAALIGAG-------GLGTFILLGIDRSNTALTLTGAIGSALLA 192

Query: 567 LALNRFLWH 575
           +  +  +  
Sbjct: 193 VVFSWLITR 201


>gi|51598407|ref|YP_072595.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii PBi]
 gi|51572978|gb|AAU07003.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii PBi]
          Length = 299

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 85/207 (41%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + +  T   +  ++ +S++       L     R  + L PILD+MQ++P   +L   +
Sbjct: 84  LWEASMDTIAIIFVSVFVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F             +AIFA     +  +       +  +  ++ E ++SF  S  +  
Sbjct: 144 PFFGMG--------TASAIFATIIFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRIL 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +   
Sbjct: 196 LQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFGE 248

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L + L ++ +  + D+++    I +S
Sbjct: 249 GLISGLAVVIIAIILDRVMQSIFIKFS 275



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            IF         + +  + +  I+  F +     +      T+  + V + ++ I+ IP+
Sbjct: 50  IIFILTACLLSLVFLKKRLVFLILPGFFFILYFDLWEASMDTIAIIFVSVFVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRVM 267


>gi|317056692|ref|YP_004105159.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
 gi|315448961|gb|ADU22525.1| binding-protein-dependent transport systems inner membrane
           component [Ruminococcus albus 7]
          Length = 359

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 10/201 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D  Y++     ++           ++ +  GI IG+ P +   + P  ++    PA  + 
Sbjct: 154 DSEYILQNTLYSLRLYAAGFSCGVLLGVGTGILIGWFPKVYYWVFPVLKITGVVPAVAWM 213

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P  ++ +     N       L++    + I F    G  + P    E A     +     
Sbjct: 214 PFALTLLP----NSFTAAVFLIVICAWFQIAFLTAQGIQSTPRQSFEAARILGSSSVDQI 269

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ +P   P   TG  +A   A+   ++SE+        +  GLG YI +S    ++ +
Sbjct: 270 LHVAIPHAMPDIFTGITSANAMAFTTLVMSEMLG------QPGGLGYYINQSKVWSAYYK 323

Query: 555 VVLGVLIMCCFVLALNRFLWH 575
           V+  ++IM      +N  +  
Sbjct: 324 VLAAIVIMAVLFSFINHIIGR 344



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   + Q    +     +     +L       L     ++   + P+L I   +P + ++
Sbjct: 154 DSEYILQNTLYSLRLYAAGFSCGVLLGVGTGILIGWFPKVYYWVFPVLKITGVVPAVAWM 213

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F +    N +         AA+F I     + + F   Q + + PR   E +R    S 
Sbjct: 214 PFALTLLPNSFT--------AAVFLIVICAWFQIAFLTAQGIQSTPRQSFEAARILGSSS 265

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
             +  ++ +P +MP +   +  + +  +  +V SEM+          G+G YI  +    
Sbjct: 266 VDQILHVAIPHAMPDIFTGITSANAMAFTTLVMSEMLG------QPGGLGYYINQSKVWS 319

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +L A++ M  +    + ++ R
Sbjct: 320 AYYKVLAAIVIMAVLFSFINHIIGR 344


>gi|227533548|ref|ZP_03963597.1| ABC superfamily ATP binding cassette transporter membrane permease
           protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227188807|gb|EEI68874.1| ABC superfamily ATP binding cassette transporter membrane permease
           protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 282

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 82/263 (31%), Gaps = 17/263 (6%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L + +  +         +  +  +V   +           A+   W +   +    T  
Sbjct: 10  ALMQEVTTLTQRPKPRTKRHINWFKVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVI 69

Query: 375 DVLYVIWLG-------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                +W          I+++R      I   I   +G+  G    I + +    Q+L  
Sbjct: 70  QDGITLWQSGELPKNIAISLYRATAGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRN 129

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P       ++  +             L+  G  + I  N   G +    +  E+  ++ 
Sbjct: 130 IPHLS----LIPLLIILIGIGESTKISLVAIGVMFPIYINTYQGITTADPELLEMGHAYG 185

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++    +  II PG  P  + G   A G  W   IV+E  S       + GLG     + 
Sbjct: 186 LSKRDLFTRIIFPGALPNILMGVRYALGVMWTTLIVAETIS------SSYGLGYMATNAQ 239

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           E      V+L +LI        +
Sbjct: 240 EFMRMDTVLLCILIYALLGKLSD 262



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 89/258 (34%), Gaps = 17/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P I  L         ++           P  ++           LP+  + +  R  
Sbjct: 34  KVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGELPKNIAISLYRAT 93

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   I     FV   +    R +  +L   + ++++IP         +  + L    +  
Sbjct: 94  AGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPH--------LSLIPLLIILIGI 145

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E   I  +    ++ +  + YQ +     +L E+  ++ LS    F  +  P ++P ++
Sbjct: 146 GESTKISLVAIGVMFPIYINTYQGITTADPELLEMGHAYGLSKRDLFTRIIFPGALPNIL 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  +L  +L    +  
Sbjct: 206 MGVRYALGVMWTTLIVAETISSS------YGLGYMATNAQEFMRMDTVLLCILIYALLGK 259

Query: 254 LYDQL---LFRPMIVWSN 268
           L D +   L +  + W  
Sbjct: 260 LSDLIAKSLEKVFLSWRQ 277


>gi|70728757|ref|YP_258506.1| aliphatic sulfonates ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68343056|gb|AAY90662.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 273

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 75/209 (35%), Gaps = 13/209 (6%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G +       ++   +W   +++ R +  + I   +   + +  G        I    Q+
Sbjct: 61  GTLWQMLGSGELAGHLW---VSLKRALSGLTIGVSLGTLLALVAGLSRRGELAIDSPMQM 117

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     PL +                L+  GT + I   + +G  +      E A+
Sbjct: 118 LRTLPFLAIVPLFILWFGVGET----PKIALIALGTTFPIYLTLFSGIRSLDPKLVEAAT 173

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              +  W    ++ILPG  P +  G   A G +W   +V E  +       + G+G  + 
Sbjct: 174 LLGLKRWELIVHVILPGALPAFFVGLRYAFGISWLGLVVVEQIN------ASAGIGYLVN 227

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +      +V+ +L+     L ++  +
Sbjct: 228 DARDFMRTDVIVICLLVYSVLGLGIDGLV 256



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 17/231 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   L    L  +   +  R LS + I +    + A +A  SRR  + +  
Sbjct: 54  AAPSTIGGTLWQMLGSGELAGHLWVSLKRALSGLTIGVSLGTLLALVAGLSRRGELAIDS 113

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +++++P L  +   +++F      K        I  I     + +  +++  + ++ 
Sbjct: 114 PMQMLRTLPFLAIVPLFILWFGVGETPK--------IALIALGTTFPIYLTLFSGIRSLD 165

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E +    L  W+   ++ +P ++P     +  +    W  +V  E I         
Sbjct: 166 PKLVEAATLLGLKRWELIVHVILPGALPAFFVGLRYAFGISWLGLVVVEQINASA----- 220

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
            GIG  +  A        I+  +L    +    D L   L R  + W   F
Sbjct: 221 -GIGYLVNDARDFMRTDVIVICLLVYSVLGLGIDGLVRGLERCALAWRPTF 270


>gi|242372956|ref|ZP_04818530.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242349440|gb|EES41041.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 504

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ +       L  K+++L  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLLSTIIEHIQISFIALLIATIIAVPLGILLTKTKKLSEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + AI A+    +  +  + Y  +  +   L E ++   +  ++
Sbjct: 73  MIPIFGIG--------RVPAIIALVVYALLPILRNTYTGIKEVDPSLVEAAKGIGMKPFR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              D   IL   +    +  ++D L+ R M   S K
Sbjct: 173 DRNDSSLILIGAIPAALLAIIFD-LILRYMEKLSYK 207



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+II +P+GI +     +S  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATIIAVPLGILLTKTKKLSEIVMNIAAVLQTIPSLALLGLMIPIFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLVEAAKGIGMKPFRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDSSLILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRYMEKLSYKKL 209


>gi|239945193|ref|ZP_04697130.1| putative ABC-type sulfate transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991654|ref|ZP_04712318.1| putative ABC-type sulfate transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
 gi|291448658|ref|ZP_06588048.1| transport system integral membrane protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291351605|gb|EFE78509.1| transport system integral membrane protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 309

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 88/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + D         +L      +  R L   ++++        L A+ + +   +
Sbjct: 83  KLPPPSAVWDSAREMWLQGTLLDVVWTSVSRGLLGFLLAVAIGTPLGLLVARVKLVRAAI 142

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++            +      I    V ++   +   +  
Sbjct: 143 GPILSGLQSLPSVAWVAPAVIWLGLN--------DQMMFAVILLGAVPSIANGLVSGVDQ 194

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 195 VPPLFLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELG 254

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G  +       D+  I  ++L +L V    D L+F P+  W  + R
Sbjct: 255 LGL--GQLLENGRSNFDMPGIFLSILLILFVGIAIDLLIFSPLERWVLRSR 303



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R ++  ++A  I  P+G+ +     + + I P    L + P+  +    V  +    
Sbjct: 110 SVSRGLLGFLLAVAIGTPLGLLVARVKLVRAAIGPILSGLQSLPSVAWVAPAVIWLGL-- 167

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    I   +++G    P  F     +   TG R   +I+LP   P 
Sbjct: 168 --NDQMMFAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVLPAALPG 225

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +         G    +         P + L +L++   
Sbjct: 226 YLAGLKQGWAFSWRSLMAAEIIASSPELGLGLG--QLLENGRSNFDMPGIFLSILLILFV 283

Query: 566 VLALNRFLWHPLYLYGTR 583
            +A++  ++ PL  +  R
Sbjct: 284 GIAIDLLIFSPLERWVLR 301


>gi|269957314|ref|YP_003327103.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
 gi|269305995|gb|ACZ31545.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
          Length = 289

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
                +V+  + +   G +          ++       +    A  T   +L +  I+L+
Sbjct: 53  FWVVAIVLAALALFAKGWKLALGSLVGFVVIAGVNQWGN----AMDTLALVLLSAAIALI 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA++ R+   L P+LD MQ++P   +L  TVV F+    G V G     IFA
Sbjct: 109 LAVPLGIWAARNERVSQTLRPVLDFMQTMPGFVYLIPTVVIFL---TGPVPGIIATIIFA 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     +         +  + +++ E   +F  +  +    + +P ++P ++  +   + 
Sbjct: 166 MAPGVRF-----TELGIRQVDKEVVEAGHAFGATPGRILRQIQLPLALPTVMAGVNQVIM 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + M+  G       G+G+ +  A++  D+     A L ++ +    D++
Sbjct: 221 LSLSMVVIAGMVGAG-------GLGNDVVAALQRVDVALGFEAGLAVVILAMFLDRV 270



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                 +    +         W+     +  F     +        T+  V++   IA I
Sbjct: 49  SGPPFWVVAIVLAALALFAKGWKLALGSLVGFVVIAGVNQWGNAMDTLALVLLSAAIALI 108

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GIW      +S  ++P    +   P  V+    +  V  +   P   +   +IF 
Sbjct: 109 LAVPLGIWAARNERVSQTLRPVLDFMQTMPGFVYL---IPTVVIFLTGPVPGIIATIIFA 165

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               + F    G      +  E   +F  T  R  R I LP   P  + G       + +
Sbjct: 166 MAPGVRF-TELGIRQVDKEVVEAGHAFGATPGRILRQIQLPLALPTVMAGVNQVIMLSLS 224

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +   G       GLG  +  + ++          L +    + L+R
Sbjct: 225 MVVIAGMVGAG-------GLGNDVVAALQRVDVALGFEAGLAVVILAMFLDR 269


>gi|154246715|ref|YP_001417673.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154160800|gb|ABS68016.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 352

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 88/274 (32%), Gaps = 17/274 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI- 367
            +  +  +   L V+    P   L L   +     L +    +    A+    + +    
Sbjct: 74  FAVGLAAIGAALIVLSLCGPVTGLPLKGLRYWGPWLVVIPIGLFAWEAVTAKLELLPRPF 133

Query: 368 ------VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
                 +      D   +      ++  +     I + + + +G+ IG+         P 
Sbjct: 134 FVPPQSLIEVYLDDWPKLGLSTVASLKLLAWGYGIGAAVGVTLGVAIGWWRTAGYWAHPV 193

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            + +   PA  + P+          +       L+   T + +     +G ++   D+ +
Sbjct: 194 LRFIGPLPATAWLPVAFFLFP----SSWSASVFLLALATGFPVTILTWSGIASVNKDYYD 249

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +A +   +       + +P   P+   G     G ++   +V+E+           GLG 
Sbjct: 250 IARTLGASQRFLVLKVAIPAALPHVFVGLFMGLGTSFAVLVVAEMLG------VKAGLGW 303

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           Y+  +    ++  +   +++M      L   L+ 
Sbjct: 304 YLQWAQGWAAYANMYAALIVMALMCSGLVTLLFK 337



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 86/248 (34%), Gaps = 21/248 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRML 73
           +     V+ IG+        +   +PR    + P +L      D   L      +   + 
Sbjct: 105 WGPWLVVIPIGLFAWEAVTAKLELLPR-PFFVPPQSLIEVYLDDWPKLGLSTVASLKLLA 163

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               I               R  G    P+L  +  +P   +L      F          
Sbjct: 164 WGYGIGAAVGVTLGVAIGWWRTAGYWAHPVLRFIGPLPATAWLPVAFFLF--------PS 215

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  A++F +  +  + +T   +  + ++ +D  +++R+   S       + +P ++P + 
Sbjct: 216 SWSASVFLLALATGFPVTILTWSGIASVNKDYYDIARTLGASQRFLVLKVAIPAALPHVF 275

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + M +   +  +V +EM+ V        G+G Y+  A        +  A++ M  +  
Sbjct: 276 VGLFMGLGTSFAVLVVAEMLGVKA------GLGWYLQWAQGWAAYANMYAALIVMALMCS 329

Query: 254 LYDQLLFR 261
               LLF+
Sbjct: 330 GLVTLLFK 337


>gi|330810502|ref|YP_004354964.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378610|gb|AEA69960.1| Glycine betaine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 282

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 107/258 (41%), Gaps = 16/258 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHS 60
           FL++     ++      ++ +      +  I I L G +   V   I+  + +   DV  
Sbjct: 27  FLFDAANAMLTGIYKGGLWCIAYPPYYVVAIIIALIGWRIVGVRFAILTALALLFCDVMG 86

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T   +L+A V++L+       LA  +  +  ++ P+LD++Q++P   +L   +
Sbjct: 87  LWPETVSTLALVLTATVLALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIYLLPAI 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                            A+ A F   V          +   PR+  E+  +  ++GWQ F
Sbjct: 147 ALLGYG--------PATALLATFIVAVPPAIRLTSLGIRMTPREFIELGEASGVTGWQMF 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +PF+ P ++  +  S+   +  VV + ++  G       G+G  I  AI+  D+  
Sbjct: 199 LKIRLPFAKPSIMAGVNQSLMMAFGMVVIAGIVGSG-------GLGESIYGAIRTLDIAK 251

Query: 241 ILYAMLTMLGVIFLYDQL 258
            + A + ++ +  + D+L
Sbjct: 252 SINAAMAIVILTMILDRL 269



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 89/236 (37%), Gaps = 16/236 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           + +    + VV  +   I W+ +G      T   +L+   +G       T+  V+   ++
Sbjct: 45  WCIAYPPYYVVAIIIALIGWRIVGVRFAILTALALLFCDVMGLWPETVSTLALVLTATVL 104

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ IP+G+  G  P +   + P   L+   P  ++    ++ + Y      L   ++ 
Sbjct: 105 ALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIYLLPAIALLGYGPATALLATFIV- 163

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    P +F E+  +  +TGW+ +  I LP   P  + G   +   
Sbjct: 164 ---AVPPAIRLTSLGIRMTPREFIELGEASGVTGWQMFLKIRLPFAKPSIMAGVNQSLMM 220

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A+   +++ +   G       GLG  I  +       + +   + +    + L+R 
Sbjct: 221 AFGMVVIAGIVGSG-------GLGESIYGAIRTLDIAKSINAAMAIVILTMILDRL 269


>gi|82777542|ref|YP_403891.1| alkanesulfonate transporter permease subunit [Shigella dysenteriae
           Sd197]
 gi|168751200|ref|ZP_02776222.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168757029|ref|ZP_02782036.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|168769932|ref|ZP_02794939.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168776210|ref|ZP_02801217.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168783972|ref|ZP_02808979.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787366|ref|ZP_02812373.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168802784|ref|ZP_02827791.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC508]
 gi|195939651|ref|ZP_03085033.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808290|ref|ZP_03250627.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208815207|ref|ZP_03256386.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822701|ref|ZP_03263020.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209400693|ref|YP_002269606.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|254792134|ref|YP_003076971.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. TW14359]
 gi|261227438|ref|ZP_05941719.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256139|ref|ZP_05948672.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281935|ref|YP_003498753.1| putative sulfonate ABC transporter permease protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|309787807|ref|ZP_07682417.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 1617]
 gi|81241690|gb|ABB62400.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|187768358|gb|EDU32202.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188014738|gb|EDU52860.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|188998779|gb|EDU67765.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189355924|gb|EDU74343.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|189361139|gb|EDU79558.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372713|gb|EDU91129.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189375323|gb|EDU93739.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC508]
 gi|208728091|gb|EDZ77692.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208731855|gb|EDZ80543.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208738186|gb|EDZ85869.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209162093|gb|ACI39526.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|209774662|gb|ACI85643.1| putative transport system permease protein [Escherichia coli]
 gi|209774666|gb|ACI85645.1| putative transport system permease protein [Escherichia coli]
 gi|254591534|gb|ACT70895.1| alkanesulfonate transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290761808|gb|ADD55769.1| Putative sulfonate ABC transporter, permease protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|308924206|gb|EFP69703.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella dysenteriae 1617]
 gi|320192579|gb|EFW67220.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. EC1212]
 gi|320637803|gb|EFX07595.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. G5101]
 gi|320642928|gb|EFX12129.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H- str. 493-89]
 gi|320648385|gb|EFX17040.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H- str. H 2687]
 gi|320653701|gb|EFX21775.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659846|gb|EFX27402.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664315|gb|EFX31466.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326338170|gb|EGD61999.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. 1125]
          Length = 263

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 89/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|182435192|ref|YP_001822911.1| putative ABC-type sulfate transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463708|dbj|BAG18228.1| putative ABC-type sulfate transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 309

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + D         +L +    +  R L   ++++        L A+ + +   +
Sbjct: 83  KLPPPSAVWDSAREMWLAGTLLEVVWTSVSRGLFGFLLAVAIGTPLGLLVARVKLVRAAI 142

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++            +      I    V ++   +   +  
Sbjct: 143 GPILSGLQSLPSVAWVAPAVIWLGLN--------DQMMFAVILLGAVPSIANGLVSGVDQ 194

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 195 VPPLFLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELG 254

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G  +       D+  I  ++L +L V    D L+F P+  W  + R
Sbjct: 255 LGL--GQLLENGRSNFDMPGIFLSILLILFVGIAIDLLIFSPLERWVLRSR 303



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   ++A  I  P+G+ +     + + I P    L + P+  +    V  +    
Sbjct: 110 SVSRGLFGFLLAVAIGTPLGLLVARVKLVRAAIGPILSGLQSLPSVAWVAPAVIWLGL-- 167

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    I   +++G    P  F     +   TG R   +I+LP   P 
Sbjct: 168 --NDQMMFAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVLPAALPG 225

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +           G  +         P + L +L++   
Sbjct: 226 YLAGLKQGWAFSWRSLMAAEIIASSPELGLGL--GQLLENGRSNFDMPGIFLSILLILFV 283

Query: 566 VLALNRFLWHPLYLYGTR 583
            +A++  ++ PL  +  R
Sbjct: 284 GIAIDLLIFSPLERWVLR 301


>gi|167646619|ref|YP_001684282.1| binding-protein-dependent transporte inner membrane component
           [Caulobacter sp. K31]
 gi|167349049|gb|ABZ71784.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter sp. K31]
          Length = 269

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 88/258 (34%), Gaps = 19/258 (7%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
           +   PL N+     R   +    +    + L + +  S +  I    +     +   + +
Sbjct: 2   SLAVPLRNSQAPAWRWPSLAGVRWLSPTILLLAWEAGSRLGAIPARILAAPSTVAETFWA 61

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +              +     +++ R    + +A +I + +G+  G      + + P  Q
Sbjct: 62  MTVS---------GELPANLAVSLGRAGAGLSLALVIAVTLGLVSGLSRWGETLVDPLMQ 112

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P     PL +                L+     + +  N+ AG         E A
Sbjct: 113 IKRALPVVALTPLFIVWFGIGEAPK----VALIATAAVFPLYLNLFAGIRGVDVRLVEAA 168

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            SF ++G    R +ILPG  P +  G   +   +    +++E  +         GLG  I
Sbjct: 169 RSFGLSGRDLVREVILPGALPSFFVGLRYSLSISVVMLVIAEQIN------AQAGLGHLI 222

Query: 544 AESTEKGSFPEVVLGVLI 561
             + +      +V+ +L+
Sbjct: 223 NNARDFMRTDIIVVCLLV 240



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 87/235 (37%), Gaps = 17/235 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +    P  + +          LP   + +  R  + + ++L+       ++  SR    
Sbjct: 46  ARILAAPSTVAETFWAMTVSGELPANLAVSLGRAGAGLSLALVIAVTLGLVSGLSRWGET 105

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++ P++ I +++P++      +V+F           E   +  I T+ V+ +  +++  +
Sbjct: 106 LVDPLMQIKRALPVVALTPLFIVWFGIG--------EAPKVALIATAAVFPLYLNLFAGI 157

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L E +RSF LSG      + +P ++P     +  S+S     +V +E I     
Sbjct: 158 RGVDVRLVEAARSFGLSGRDLVREVILPGALPSFFVGLRYSLSISVVMLVIAEQI----- 212

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIVWSNKF 270
                G+G  I  A        I+  +L             + L R  + W   F
Sbjct: 213 -NAQAGLGHLINNARDFMRTDIIVVCLLVYALLGLAADALVRTLERKALAWRPSF 266


>gi|108760412|ref|YP_628319.1| putative aliphatic sulfonates ABC transporter permease [Myxococcus
           xanthus DK 1622]
 gi|108464292|gb|ABF89477.1| putative aliphatic sulfonates ABC transporter, permease protein
           [Myxococcus xanthus DK 1622]
          Length = 253

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 103/244 (42%), Gaps = 18/244 (7%)

Query: 22  LLAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           LL   L+IG+  ++             P  +   +   +    L   A R+  R+L A +
Sbjct: 8   LLVIALLIGLWELVARMGIWSPHLLPRPLTVAQSLVAMVTDGRLVGAAGRSLGRLLRAYL 67

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S+        L ++       + P++  +Q++P + +L   +++F             A
Sbjct: 68  MSVALGVPLGLLISRIPFFRNAVKPVVMGLQALPSICWLPLALLWFGLTDG--------A 119

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F +    V  +  +   S+  +   L  V+ +  + G +  + + +P ++PG+V  + 
Sbjct: 120 ILFVVVMGSVLGIAIATEDSVNGVDPQLTRVASTLGVRGLRFQFGVLLPAALPGIVTGLK 179

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +  S  W  ++A E++ V        G+G  + +  +  D+  ++  M+ ++ +    D+
Sbjct: 180 LGWSFAWRALLAGELLFVSG------GLGQLLTVGRELMDVPQVMAVMVAIVIIGTAVDR 233

Query: 258 LLFR 261
           +LF+
Sbjct: 234 VLFQ 237



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R++   +++  + +P+G+ I   P   + ++P    L A P+  + PL
Sbjct: 49  GRLVGAAGRSLGRLLRAYLMSVALGVPLGLLISRIPFFRNAVKPVVMGLQALPSICWLPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +  +++ G+   I        +        VAS+  + G R+   
Sbjct: 109 ALLWFGLTDG----AILFVVVMGSVLGIAIATEDSVNGVDPQLTRVASTLGVRGLRFQFG 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P  VTG       AW A +  E+         + GLG  +    E    P+V+
Sbjct: 165 VLLPAALPGIVTGLKLGWSFAWRALLAGELL------FVSGGLGQLLTVGRELMDVPQVM 218

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++ +     A++R L+  + +   R   L
Sbjct: 219 AVMVAIVIIGTAVDRVLFQTVEVRLRRRWGL 249


>gi|300087495|ref|YP_003758017.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527228|gb|ADJ25696.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 304

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 96/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V+V+G+I ++   I+       I  +  + +    L      T   +L+A++   +    
Sbjct: 54  VVVLGLIFLIAWQIKGWKFA-AISTLTMLFVGFLGLWAPTMTTLSLVLAALIFCAIVGIP 112

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA+S +   +L P+LD MQ+IP   +L   V+ F     G V G     +FA    
Sbjct: 113 LGILAARSDKFAGILRPLLDAMQTIPAFVYLVPVVMLFGV---GLVPGLIAVIVFA---- 165

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P+D+ E  RSF  +  Q  + + +P +MP ++  +  ++     
Sbjct: 166 -LPPIIRLTDLGIRQVPQDVVEAGRSFGGTNNQILFNIQIPLAMPTIMAGLNQTLMLAMS 224

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             V   +I          G+G  +   +   D+       + ++ +  + D+L
Sbjct: 225 MAVVIALI-------GASGLGLVVWTGLGRNDVGYAAIGGIGIVAIAIILDRL 270



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 84/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L      VV G+   IAWQ  G+     +   +L+V +LG       T+  V+  +I  
Sbjct: 47  FLLWLPPVVVLGLIFLIAWQIKGWKFAAISTLTMLFVGFLGLWAPTMTTLSLVLAALIFC 106

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +I+ IP+GI        +  ++P    +   PA V+   VV       +   + + +   
Sbjct: 107 AIVGIPLGILAARSDKFAGILRPLLDAMQTIPAFVYLVPVVMLFGVGLVPGLIAVIVF-- 164

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+     G    P D  E   SF  T  +    I +P   P  + G       A
Sbjct: 165 --ALPPIIRLTDLGIRQVPQDVVEAGRSFGGTNNQILFNIQIPLAMPTIMAGLNQTLMLA 222

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            + ++V  +          +GLG  +     +       +G + +    + L+R 
Sbjct: 223 MSMAVVIALIG-------ASGLGLVVWTGLGRNDVGYAAIGGIGIVAIAIILDRL 270


>gi|254248643|ref|ZP_04941963.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124875144|gb|EAY65134.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 351

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 92/254 (36%), Gaps = 18/254 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLV-----IGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           P   +RR+    +      L        + +  L        P D++          +L 
Sbjct: 92  PATPARRLHAPDWRGFVLPLAAFACWWAVASAHLVKSGLLVGPADVLHTAWAQATSGALG 151

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  S +  R      I      +   +   SR    ++ P  D  + I +  ++    V+
Sbjct: 152 RALSASLAREACGFAIGATGGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVW 211

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+   LAA+  +               +  +PR   +V+R+ R S  Q   Y
Sbjct: 212 FGLGDVAKVVFLSLAALLPVAAHTC--------DGIHAVPRTYVDVARALRYSRLQLIRY 263

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W   + +E ++V  +     GIG+ +    ++  +  +L
Sbjct: 264 VILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVL 318

Query: 243 YAMLTMLGVIFLYD 256
           + ++ +    +  +
Sbjct: 319 FGIIVVGVTGWALN 332



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 21/291 (7%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
                 +        S L+   + +     V     P         +R+       +   
Sbjct: 51  RRTRSALAPRCAVRVSRLNRAARPIEGESPVPHAATPSTSPPATPARRLHAPDWRGFVLP 110

Query: 352 VCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGC----------ITMFRVVVLIIIASI 399
           +   A   A  S   + +       DVL+  W              ++ R      I + 
Sbjct: 111 LAAFACWWAVASAHLVKSGLLVGPADVLHTAWAQATSGALGRALSASLAREACGFAIGAT 170

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G  +G     +  + P            + PL+        +   ++LS      
Sbjct: 171 GGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLS----LA 226

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  +   G  A P  + +VA +   +  +  RY+ILP   P   TG       +W 
Sbjct: 227 ALLPVAAHTCDGIHAVPRTYVDVARALRYSRLQLIRYVILPAALPSIFTGLYLGLIYSWL 286

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A++ +E        +  +G+G  + + +E+     V+ G++++     ALN
Sbjct: 287 ATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGIIVVGVTGWALN 332


>gi|158321046|ref|YP_001513553.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
 gi|158141245|gb|ABW19557.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
          Length = 279

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   +L++ +IS++         ++S+    ++ PILD+MQ++P   +L   V 
Sbjct: 88  WKGTMLTLSLILTSSLISIVIGIPLGIWMSRSKAAQNIITPILDLMQTMPAFVYLIPAVS 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G   + IFA+       +       +  +  +L E + +F  +  QK +
Sbjct: 148 FFG---IGMVPGIIASVIFAMP-----PVVRLTNLGIRQVSTELIEAADAFGSTATQKLF 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  ++      VV + MI          G+G  +  A+   +    
Sbjct: 200 KVQLPMAKSTIMAGINQTIMLALSMVVIASMI-------GAEGLGVEVFRAVTRNEAGQG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
             + ++++ +  + D++
Sbjct: 253 FASGISIVILAIILDRM 269



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 91/279 (32%), Gaps = 24/279 (8%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            + ++   +  FFSP+ N +  +   L  I    P              ++ I    ++ 
Sbjct: 15  IVAWLRKDAQWFFSPIKNLLDAIVTGLSDILIAIPP-------------LVFIMIMVILT 61

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +     W    +++        L       +T+  ++   +I+ +I IP+GIW+     
Sbjct: 62  VIITKKRWGLTVFVLGGLLLIQNLGYWKGTMLTLSLILTSSLISIVIGIPLGIWMSRSKA 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + I P   L+   PA V+    VS      +   +   +         ++     G  
Sbjct: 122 AQNIITPILDLMQTMPAFVYLIPAVSFFGIGMVPGIIASVIF----AMPPVVRLTNLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  E A +F  T  +    + LP      + G       A +  +++ +       
Sbjct: 178 QVSTELIEAADAFGSTATQKLFKVQLPMAKSTIMAGINQTIMLALSMVVIASMIG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  +  +    +     + +    + L+R 
Sbjct: 233 --AEGLGVEVFRAVTRNEAGQGFASGISIVILAIILDRM 269


>gi|26246962|ref|NP_753002.1| alkanesulfonate transporter permease subunit [Escherichia coli
           CFT073]
 gi|91210036|ref|YP_540022.1| alkanesulfonate transporter permease subunit [Escherichia coli
           UTI89]
 gi|117623152|ref|YP_852065.1| alkanesulfonate transporter permease subunit [Escherichia coli APEC
           O1]
 gi|170683085|ref|YP_001744235.1| alkanesulfonate transporter permease subunit [Escherichia coli
           SMS-3-5]
 gi|227884100|ref|ZP_04001905.1| alkanesulfonate transporter permease subunit [Escherichia coli
           83972]
 gi|237707077|ref|ZP_04537558.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           3_2_53FAA]
 gi|293404239|ref|ZP_06648233.1| aliphatic sulfonates transport system permease [Escherichia coli
           FVEC1412]
 gi|298380023|ref|ZP_06989628.1| sulfonate/nitrate/taurine transport system permease [Escherichia
           coli FVEC1302]
 gi|300896320|ref|ZP_07114863.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300978398|ref|ZP_07174249.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047802|ref|ZP_07194855.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|331657006|ref|ZP_08357968.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA206]
 gi|331662352|ref|ZP_08363275.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA143]
 gi|26107362|gb|AAN79545.1|AE016758_149 Putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli CFT073]
 gi|91071610|gb|ABE06491.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli UTI89]
 gi|115512276|gb|ABJ00351.1| SsuC [Escherichia coli APEC O1]
 gi|170520803|gb|ACB18981.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli SMS-3-5]
 gi|226898287|gb|EEH84546.1| alkanesulfonate transporter permease subunit [Escherichia sp.
           3_2_53FAA]
 gi|227838852|gb|EEJ49318.1| alkanesulfonate transporter permease subunit [Escherichia coli
           83972]
 gi|291428825|gb|EFF01850.1| aliphatic sulfonates transport system permease [Escherichia coli
           FVEC1412]
 gi|294492255|gb|ADE91011.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli IHE3034]
 gi|298279721|gb|EFI21229.1| sulfonate/nitrate/taurine transport system permease [Escherichia
           coli FVEC1302]
 gi|300300334|gb|EFJ56719.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300359785|gb|EFJ75655.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300409686|gb|EFJ93224.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|307552773|gb|ADN45548.1| aliphatic sulfonates transport permease protein with ABC type-1
           transporter domain [Escherichia coli ABU 83972]
 gi|315287579|gb|EFU46985.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315291195|gb|EFU50555.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315296249|gb|EFU55556.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|323953357|gb|EGB49223.1| inner membrane transport system [Escherichia coli H252]
 gi|323958240|gb|EGB53949.1| inner membrane transport system [Escherichia coli H263]
 gi|331055254|gb|EGI27263.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA206]
 gi|331060774|gb|EGI32738.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli TA143]
          Length = 264

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240


>gi|308179620|ref|YP_003923748.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|308045111|gb|ADN97654.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 337

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G     +    P+ +++   PA  + PL +      ++        L+ F   + + F 
Sbjct: 167 MGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFM 222

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G      ++ E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+ 
Sbjct: 223 TIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMI 282

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                     GLG +I  +   G++ +V   ++IM   
Sbjct: 283 G------AKVGLGWFINWAKGTGNYTQVYAAIVIMAIL 314



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  ++V  ++      +++         +  +  +   L      +    L + VI  +
Sbjct: 99  LVGLLIVQDLLTEKFAVLEQPFFVSFAQILDQMRENAGLLWASTLSSLALWLISFVIGTI 158

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +      + R       P L ++  IP   ++  T+V F          + +A +F 
Sbjct: 159 LGILLGLGMGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIF--------PTSYMAEVFL 210

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + + F     +  I ++  E +++   S WQ    + +P ++P +   +  +M 
Sbjct: 211 IAFSVWFPVAFMTIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMG 270

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +  +V SEMI          G+G +I  A    +   +  A++ M  +  + 
Sbjct: 271 LSFTMLVISEMIGAKV------GLGWFINWAKGTGNYTQVYAAIVIMAILFSVL 318


>gi|262364301|gb|ACY60858.1| taurine transport system permease protein [Yersinia pestis D182038]
          Length = 171

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G   ++   + P  ++    P   + PL+V        +      LL+       +   
Sbjct: 1   MGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLA 56

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +AG  +  +     A +   + W+   +++LP   P  +TG     G  W+  + +E+ 
Sbjct: 57  AVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 116

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +       T GLG  +  + E  +   V+ G+ ++      +    R +   L  +
Sbjct: 117 A------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 166



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 77/180 (42%), Gaps = 17/180 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              +  +  VL P+++I + +P L +L   V++F           E + I  I+ +    
Sbjct: 1   MGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLAIFAP 52

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +T +    + ++       +R+   S WQ  W++ +P ++P ++  + + +  GW  +VA
Sbjct: 53  VTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVA 112

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
           +E+I          G+G  +  A +      ++  +  +  + F   L  + + R +  W
Sbjct: 113 AELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 166


>gi|331646200|ref|ZP_08347303.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli M605]
 gi|330910714|gb|EGH39224.1| alkanesulfonates transport system permease protein [Escherichia
           coli AA86]
 gi|331044952|gb|EGI17079.1| putative aliphatic sulfonates transport permease protein SsuC
           [Escherichia coli M605]
          Length = 264

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSLEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGMPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSLEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGMPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240


>gi|71910669|ref|YP_282219.1| glycine betaine transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|71853451|gb|AAZ51474.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS5005]
          Length = 508

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 72/195 (36%), Gaps = 13/195 (6%)

Query: 381 WLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           WL  +   +   ++ ++IA +I +P+   +      S  +     +    P+     L +
Sbjct: 15  WLAALGEHLQISLLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI 74

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L     L +  IF     IL N I G +       E   +F +T W   +   
Sbjct: 75  PLMGIGTLPAVTALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFE 130

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++G  T+       + ++ +   G       GLG++I    ++ +   +++G
Sbjct: 131 IPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIG 183

Query: 559 VLIMCCFVLALNRFL 573
            +      +  N  L
Sbjct: 184 AISSALLAIIFNSLL 198


>gi|288917489|ref|ZP_06411855.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288351192|gb|EFC85403.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 330

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 91/278 (32%), Gaps = 12/278 (4%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R +  +     +        L       R   P+   ++     +     I     +   
Sbjct: 48  RVVVAAPAPGAAEPGRVALALADPDRARRRPVPKWLRRMLGPVLLVAFWQIGSSTGLIQA 107

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            I     ++  +   +       +     I++ RV   + +   + + + +  G      
Sbjct: 108 DILAGPWTV--LHTGYDLAADGTLGENLVISLRRVAFGLALGVGVAVVLALVSGLFQLGE 165

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             +    Q+L A P     PL +                L+  GT + +  N  A     
Sbjct: 166 DLVDAPVQILRAVPILGLVPLAIVWFGIG----EQVKVFLVALGTAFPVYINTFAAIRGV 221

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
            + F E+A +  +      R ++LPG  P ++ G   A   +W   +VSE  +       
Sbjct: 222 DSRFVELARTVRLGRLGLIRRVVLPGALPGFLVGLRFAFTISWLILVVSEQIN------A 275

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++G+G  + ++   G    +V+G+ +     L  +  +
Sbjct: 276 SSGIGYLMDQARTFGQTDVIVVGLAVYGVLGLLSDALV 313



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 96/267 (35%), Gaps = 22/267 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINIL-----LHGIQETTVPRDIVDIVPITLDVHSLP 62
           P    RR  P     +   +++     +     L        P  ++          +L 
Sbjct: 71  PDRARRRPVPKWLRRMLGPVLLVAFWQIGSSTGLIQADILAGPWTVLHTGYDLAADGTLG 130

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    +  R+   + + +    V A ++   +    ++   + I++++PILG +   +V+
Sbjct: 131 ENLVISLRRVAFGLALGVGVAVVLALVSGLFQLGEDLVDAPVQILRAVPILGLVPLAIVW 190

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E   +F +     + +  + + ++  +     E++R+ RL        
Sbjct: 191 FGIG--------EQVKVFLVALGTAFPVYINTFAAIRGVDSRFVELARTVRLGRLGLIRR 242

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PG +  +  + +  W  +V SE I          GIG  +  A        I+
Sbjct: 243 VVLPGALPGFLVGLRFAFTISWLILVVSEQINASS------GIGYLMDQARTFGQTDVIV 296

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVW 266
             +     +  L D   +LL R  + W
Sbjct: 297 VGLAVYGVLGLLSDALVRLLERRALAW 323


>gi|227524881|ref|ZP_03954930.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227087952|gb|EEI23264.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, binding and permease protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 508

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                  L +++I+++     A  A   R    + +    IMQ+IP L  L         
Sbjct: 21  MEHVYLTLISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAIL-------GI 73

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P   IG++ A I  +    +  +  + Y +L  I  +L E +  F L+ WQ+ + + +
Sbjct: 74  LIPIVGIGSKPAIIALVIYGIL-PIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIEL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S   ++  +  S          + +I  G       G+G++I L I   +    L   
Sbjct: 133 PLSKDSILTGIKTSTVLIIGTATLAALIGAG-------GLGTFILLGIDRSNTALTLTGA 185

Query: 246 LTMLGVIFLYDQLLFR 261
           +    +  ++  L+ R
Sbjct: 186 IGSALLAVVFSWLITR 201



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +IIA +I IP+ ++       +     F  ++   P+     +++  V     
Sbjct: 24  VYLTLISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGILIPIVGIGSK 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  I      I  N     +    +  E A  F +T W+    I LP      
Sbjct: 84  PAIIALVIYGIL----PIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG  T+       + ++ +   G       GLG +I    ++ +    + G +      
Sbjct: 140 LTGIKTSTVLIIGTATLAALIGAG-------GLGTFILLGIDRSNTALTLTGAIGSALLA 192

Query: 567 LALNRFLWH 575
           +  +  +  
Sbjct: 193 VVFSWLITR 201


>gi|226945156|ref|YP_002800229.1| ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226720083|gb|ACO79254.1| ABC transporter, permease protein [Azotobacter vinelandii DJ]
          Length = 288

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L+  +   L            +   +   L    L +  + +   ++   +I +L
Sbjct: 45  LMTLALLWEVAARLQGNDLLLPSFLQVARALVEDLASGELLEKVAISLSVLVKGYLIGIL 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV  +LA  S+    +L  +  +   +P +  L   +++F           E + IF 
Sbjct: 105 LAFVLTSLAVSSQLGRDLLSTLTAMFNPLPAIALLPVALLWFGLG--------EGSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W++  + Y     +P     V R++ L G +    + VP ++P ++  + +  +
Sbjct: 157 LVHSVLWSLALNTYAGFLGVPETQRMVGRNYGLRGLRFVALILVPAALPSILSGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  +VA+E++    +     G+G YI     E     +   +  ++ +  L + L+F 
Sbjct: 217 FAWRTLVAAELVFGASS--GQGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVESLVFA 274

Query: 262 PMIVWSNK 269
            +  ++ +
Sbjct: 275 LLERYTVR 282



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 71/201 (35%), Gaps = 6/201 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++  +V   +I  ++   +             +     +    PA    P+ +     
Sbjct: 89  AISLSVLVKGYLIGILLAFVLTSLAVSSQLGRDLLSTLTAMFNPLPAIALLPVALLWFGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L  +++    W +  N  AG    P   + V  ++ + G R+   I++P   
Sbjct: 149 GEGS----LIFVLVHSVLWSLALNTYAGFLGVPETQRMVGRNYGLRGLRFVALILVPAAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G       AW   + +E+           GLG YI ++  +    +V  G+ ++ 
Sbjct: 205 PSILSGLKIGWAFAWRTLVAAELVFGASS--GQGGLGWYIFQNRNELYTDKVFAGLAVVI 262

Query: 564 CFVLALNRFLWHPLYLYGTRC 584
              L +   ++  L  Y  R 
Sbjct: 263 LIGLLVESLVFALLERYTVRR 283


>gi|84685060|ref|ZP_01012959.1| ABC transporter, inner membrane subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666792|gb|EAQ13263.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2654]
          Length = 281

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 97/255 (38%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++ +   +   +LV   +   + G      P D+V          ++P+   ++   ++ 
Sbjct: 33  LWSSWIGITLLLLVSMEVLNAVAGKLVMPSPVDVVREGVGMTLDGTIPRALGQSLTVLVL 92

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +++ +               G V  P ++ M S P   F+   +V+F           
Sbjct: 93  GYLLAAVTGIGIGIFLGGLPFAGRVFDPFVNAMNSTPGAAFIPLIIVWFGLY-------- 144

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I  ++ + ++ +  +    + +  RDL E+++SF    W  FW + VP ++P ++ 
Sbjct: 145 TEAKIVVVWNAALFPILINTAAGIASANRDLTEMAQSFGAGRWSLFWQVMVPDALPSILS 204

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTMLGV 251
            + +  +      V +E+       +   G+G  +  A     +    A+++ ++ +   
Sbjct: 205 GLRIGAAISTVGTVIAEL------TMAQSGLGGLLVAAGNRFQMDKYFAVVFVLMALGTA 258

Query: 252 IFLYDQLLFRPMIVW 266
           I    +   R +  W
Sbjct: 259 ITASLRYAERRLGRW 273



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 96/268 (35%), Gaps = 15/268 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
            T    +    +  L   S   ++ +L +    +       +    +  +          
Sbjct: 18  STARAAKARTRKRVLLWSSWIGITLLLLVSMEVLNAVAGKLVMPSPVDVVREGVGMTLDG 77

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++  +V+  ++A++  I +GI++G  P       PF   + + P   F PL+
Sbjct: 78  TIPRALGQSLTVLVLGYLLAAVTGIGIGIFLGGLPFAGRVFDPFVNAMNSTPGAAFIPLI 137

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +     Y         +++     + IL N  AG ++   D  E+A SF    W  +  +
Sbjct: 138 IVWFGLY----TEAKIVVVWNAALFPILINTAAGIASANRDLTEMAQSFGAGRWSLFWQV 193

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++G       +   ++++E+       +  +GLG  +  +  +    +   
Sbjct: 194 MVPDALPSILSGLRIGAAISTVGTVIAEL------TMAQSGLGGLLVAAGNRFQMDKYFA 247

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            V ++     A+   L      Y  R L
Sbjct: 248 VVFVLMALGTAITASL-----RYAERRL 270


>gi|293605149|ref|ZP_06687539.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292816450|gb|EFF75541.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 275

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 16/240 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------LYVIWLGCITMFRVVVL 393
            S +L   WF V     +   +    + V       +        +      ++ RV   
Sbjct: 32  TSIVLIALWFLVTSTGWVRPLFLPSPFAVYDKFISAMTDGVANSTLAEHAMASLTRVFSA 91

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            ++A +  +P+GI +G   +      P  +     P   + PL++         P + L 
Sbjct: 92  FLLACVTAVPIGILMGVNRYARGIFDPPIEFYRPLPPLAYLPLIIIWFGIGEF-PKILLI 150

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L IF     +     AG  +   +    A +   T  +   ++IL    P   TG    
Sbjct: 151 YLAIFA---PMAIAARAGVRSVSIEQIHAAYAMGGTPMQIVWHVILKAAMPEIFTGLRIG 207

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G  W   + +E+ +         GLG  +  + +  +   V++G++++  F  A +  +
Sbjct: 208 IGVGWTTLVAAEMVA------ADRGLGFMVLNAAQFLASDVVIMGIIVIGVFAFAFDLLV 261



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 92/242 (38%), Gaps = 19/242 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVD----IVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  + +  ++             P  + D     +   +   +L ++A  +  R+ SA +
Sbjct: 34  IVLIALWFLVTSTGWVRPLFLPSPFAVYDKFISAMTDGVANSTLAEHAMASLTRVFSAFL 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ +       L   +R    +  P ++  + +P L +L   +++F           E  
Sbjct: 94  LACVTAVPIGILMGVNRYARGIFDPPIEFYRPLPPLAYLPLIIIWFGIG--------EFP 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I+ +    M  +    + ++  +    + +   +  Q  W++ +  +MP +   + 
Sbjct: 146 KILLIYLAIFAPMAIAARAGVRSVSIEQIHAAYAMGGTPMQIVWHVILKAAMPEIFTGLR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +    F +D 
Sbjct: 206 IGIGVGWTTLVAAEMVA------ADRGLGFMVLNAAQFLASDVVIMGIIVIGVFAFAFDL 259

Query: 258 LL 259
           L+
Sbjct: 260 LV 261


>gi|15675111|ref|NP_269285.1| putative ABC transporter binding protein [Streptococcus pyogenes M1
           GAS]
 gi|13622269|gb|AAK34006.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           M1 GAS]
          Length = 510

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 29  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 81  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 140

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 141 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 193

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 194 IIFNSLL 200



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 29  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 89  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 145 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 197

Query: 571 RFL 573
             L
Sbjct: 198 SLL 200


>gi|258513837|ref|YP_003190059.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
 gi|257777542|gb|ACV61436.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum acetoxidans DSM 771]
          Length = 277

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   +  T   +LSA   +L+ +F    L A+S      ++P+LD+MQ++P   +L   
Sbjct: 84  QLWVPSMETLALVLSATFFALIISFPIGILTARSGVFHKAVMPVLDLMQTMPPFVYLVPA 143

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F     G V G     IFA+       +       +  +P +L E + +F  +  QK
Sbjct: 144 VIFFQ---IGNVPGLIATIIFAMP-----PVIRLTGLGIRQVPVELIEAAEAFGSTPGQK 195

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +   +      VV + MI  G       G+GS +   I+   + 
Sbjct: 196 LVKVQIPLALPTIMAGVNQCILLALSMVVIAAMIGAG-------GLGSVVLRGIQRLQVG 248

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D++
Sbjct: 249 VGFEGGLAIVIIAIILDRI 267



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 6/187 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +  +V      I+ + +  I +      +  L +      T+  V+     A II  P+
Sbjct: 51  IFIVLVMAFIWVISKRIVLSIGSGLGLLLIYNLQLWVPSMETLALVLSATFFALIISFPI 110

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI           + P   L+   P  V+    V      ++   +   +         +
Sbjct: 111 GILTARSGVFHKAVMPVLDLMQTMPPFVYLVPAVIFFQIGNVPGLIATIIF----AMPPV 166

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P +  E A +F  T  +    + +P   P  + G       A +  +++
Sbjct: 167 IRLTGLGIRQVPVELIEAAEAFGSTPGQKLVKVQIPLALPTIMAGVNQCILLALSMVVIA 226

Query: 525 EVASWGH 531
            +   G 
Sbjct: 227 AMIGAGG 233


>gi|224534227|ref|ZP_03674805.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia spielmanii A14S]
 gi|224514329|gb|EEF84645.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia spielmanii A14S]
          Length = 299

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 85/208 (40%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++ +S++             R  + L PILD+MQ++P   +L   
Sbjct: 83  NLWEASMDTIAIIFVSVFVSVILGIPIGIFGGYFPRFYVFLKPILDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +  ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TASAIFATIVFAMPPVIRYTRLGIVQVSNEVIEAAKSFGSSNLRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +  
Sbjct: 195 LLQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVIIAIILDRIMQSIFIKFS 275



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 83/217 (38%), Gaps = 11/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           I +  + I  I+  F +     +      T+  + V + ++ I+ IP+GI+ G+ P    
Sbjct: 62  IFLKKRLIFLILPGFFFILYFNLWEASMDTIAIIFVSVFVSVILGIPIGIFGGYFPRFYV 121

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P   L+ A P  ++    +        +      +         ++     G     
Sbjct: 122 FLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIVF----AMPPVIRYTRLGIVQVS 177

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N+  E A SF  +  R    + LP      + G   +   A +  +++ +         +
Sbjct: 178 NEVIEAAKSFGSSNLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVG-------S 230

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 231 SGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIM 267


>gi|170750762|ref|YP_001757022.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170657284|gb|ACB26339.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 308

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 86/203 (42%), Gaps = 10/203 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +LP  A  +   +L      +    +   +A  SR    +L  +  +   +P +  L  
Sbjct: 102 GTLPARAWSSLKVLLMGYAAGVALATLLTGVAIASRIGTDLLETLTSMFNPLPAIALLPL 161

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + IF +  S  W +  + +    ++ R L+ V R++ LSG +
Sbjct: 162 ALIWFGLGNG--------SLIFVLVHSVTWAIALNTHSGFLSVSRTLKMVGRNYGLSGPR 213

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P ++  + +  +  W  ++A+E++    +     G+G +I       D+
Sbjct: 214 LIGKILIPAAFPSILTGLKVGWAFAWRTLIAAELVFGVSS--GAGGLGWFIFENKNMLDI 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             +   +LT++ +  + + L+F+
Sbjct: 272 PNVFAGLLTVILIGLVVENLIFQ 294



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 20/239 (8%)

Query: 351 VVCGVAIGIAWQSIG------YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           VV  V +   W++ G       +   F+     +V  +   T+       +   ++    
Sbjct: 62  VVILVLLAGIWEAYGRYLDNDLLFPTFSATVEAFVRGIADGTLPARAWSSLKVLLMGYAA 121

Query: 405 GIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           G+ +              +  ++    +    PA    PL +      + +    L  ++
Sbjct: 122 GVALATLLTGVAIASRIGTDLLETLTSMFNPLPAIALLPLALIWFGLGNGS----LIFVL 177

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +    W I  N  +G  +     K V  ++ ++G R    I++P  FP  +TG       
Sbjct: 178 VHSVTWAIALNTHSGFLSVSRTLKMVGRNYGLSGPRLIGKILIPAAFPSILTGLKVGWAF 237

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           AW   I +E+     +     GLG +I E+      P V  G+L +    L +   ++ 
Sbjct: 238 AWRTLIAAELVFG--VSSGAGGLGWFIFENKNMLDIPNVFAGLLTVILIGLVVENLIFQ 294


>gi|33242381|ref|NP_877322.1| ABC transporter [Chlamydophila pneumoniae TW-183]
 gi|33236892|gb|AAP98979.1| ABC transporter [Chlamydophila pneumoniae TW-183]
          Length = 591

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 81/216 (37%), Gaps = 16/216 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I      +L +  L   A  T   +L    +++  + V AT+    +    +L P
Sbjct: 34  PPPSSIASSTLQSLPL--LLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQP 91

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++Q  P+       V++F             A I     +  + +T ++YQ + + P
Sbjct: 92  LFILLQCTPMFALAPLIVLWFGWGIG--------AVIVPTALTIFFPLTLTIYQGILSTP 143

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +L E       + +Q    L +P ++P +   + +++    F  +A E +         
Sbjct: 144 EELIEQFVLCGATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQ 197

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  +  + +  ++      + T+  +     Q+
Sbjct: 198 SGLGILMLESRRNYEMELAFAGLATLSILTLSLFQI 233



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +   T Q +  ++     T+  ++    +A  + I +   +         +QP   LL  
Sbjct: 39  IASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQPLFILLQC 98

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V    +      +  +L + F     +   +  G  + P +  E      
Sbjct: 99  TPMFALAPLIVLWFGWGIGAVIVPTALTIFF----PLTLTIYQGILSTPEELIEQFVLCG 154

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T ++    + +P   P+  +G   A G A  A+I  E  +        +GLG  + ES 
Sbjct: 155 ATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQSGLGILMLESR 208

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                     G+  +    L+L
Sbjct: 209 RNYEMELAFAGLATLSILTLSL 230


>gi|33594704|ref|NP_882348.1| ABC transporter permease protein [Bordetella pertussis Tohama I]
 gi|33598890|ref|NP_886533.1| ABC transporter permease protein [Bordetella parapertussis 12822]
 gi|33603969|ref|NP_891529.1| ABC transporter permease protein [Bordetella bronchiseptica RB50]
 gi|33564780|emb|CAE44108.1| ABC transporter permease protein [Bordetella pertussis Tohama I]
 gi|33568945|emb|CAE35359.1| ABC transporter permease protein [Bordetella bronchiseptica RB50]
 gi|33575020|emb|CAE39686.1| ABC transporter permease protein [Bordetella parapertussis]
 gi|332384115|gb|AEE68962.1| ABC transporter permease protein [Bordetella pertussis CS]
          Length = 293

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 10/219 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    LP  A+ +   +       +   FV  TLA  +R    +L 
Sbjct: 70  LPGAWQTARAFFQELGSGQLPARAALSFSVLFKGYAAGVALAFVLTTLAVSTRFGRDLLS 129

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W M  +MY     +
Sbjct: 130 TLTAMFNPLPAIALLPLAMLWFGLGQG--------SLVFVLIHSVLWAMAVNMYSGFLTV 181

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L    R++ L+G +    + VP ++P ++  + ++ +  W  ++A+E++    +   
Sbjct: 182 SETLRMAGRNYGLTGLRYVLGILVPAALPSILSGLRIAWAFAWRTLIAAELVFGASS--G 239

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             G+G YI     E     +   +  ++ +    + L+F
Sbjct: 240 KGGLGWYIFQNRNELYTDRVFAGLAAVVLIGLAVENLVF 278



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 9/225 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           AWQ+               +     ++   +         +   +             + 
Sbjct: 73  AWQTARAFFQELGS---GQLPARAALSFSVLFKGYAAGVALAFVLTTLAVSTRFGRDLLS 129

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               +    PA    PL +        +    L  ++I    W +  N+ +G        
Sbjct: 130 TLTAMFNPLPAIALLPLAMLWFGLGQGS----LVFVLIHSVLWAMAVNMYSGFLTVSETL 185

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +    ++ +TG R+   I++P   P  ++G   A   AW   I +E+           GL
Sbjct: 186 RMAGRNYGLTGLRYVLGILVPAALPSILSGLRIAWAFAWRTLIAAELVFGASS--GKGGL 243

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           G YI ++  +     V  G+  +    LA+   ++  L     R 
Sbjct: 244 GWYIFQNRNELYTDRVFAGLAAVVLIGLAVENLVFDTLERVTVRR 288


>gi|298292987|ref|YP_003694926.1| choline ABC transporter permease [Starkeya novella DSM 506]
 gi|296929498|gb|ADH90307.1| choline ABC transporter, permease protein [Starkeya novella DSM
           506]
          Length = 283

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 94/237 (39%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+I I  +    +  +      +    + +           T   ++ A ++ ++    
Sbjct: 55  LLLIAIFALGAWWMHRSIGLVVFIVGALLLVTNLGYWSATMETLSLVICATLVCVIVGVP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA    L   + PILD+MQ+IP   +L  T+V F     G V G     IFAI   
Sbjct: 115 IGIAAAHRPWLYTGIRPILDLMQTIPTFVYLIPTLVLFGL---GAVPGLISTVIFAIPAP 171

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + ++P  L E  ++F  +  Q  + + +P+++P ++  +   +     
Sbjct: 172 -----IRLTHLGISSVPPALYEAGKAFGATKTQLLFKVELPYALPTIMAGVTQCIMLSLS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G  +  A+   ++     A L ++ +  + D++  RP
Sbjct: 227 MVVIAALV-------GADGLGKPVVRALNSVNIAMGFEAGLAIVVLAIVLDRVCKRP 276



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 92/277 (33%), Gaps = 19/277 (6%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW---FCVVCGVAIGIAWQSI 364
           PL   ++     L      F +    +       +   + W     ++   A+G  W   
Sbjct: 11  PLGIWLRDFVDLLTTHGQSFFDFVSLVLGGLIGGFTAALLWVPPLLLIAIFALGAWWMHR 70

Query: 365 GYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
              +  F    +L V  LG       T+  V+   ++  I+ +P+GI    RP + + I+
Sbjct: 71  SIGLVVFIVGALLLVTNLGYWSATMETLSLVICATLVCVIVGVPIGIAAAHRPWLYTGIR 130

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   L+   P  V+    +  +  + L     L   +IF     I      G S+ P   
Sbjct: 131 PILDLMQTIPTFVYL---IPTLVLFGLGAVPGLISTVIFAIPAPIRL-THLGISSVPPAL 186

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E   +F  T  +    + LP   P  + G       + +  +++ +           GL
Sbjct: 187 YEAGKAFGATKTQLLFKVELPYALPTIMAGVTQCIMLSLSMVVIAALVG-------ADGL 239

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           G  +  +    +        L +    + L+R    P
Sbjct: 240 GKPVVRALNSVNIAMGFEAGLAIVVLAIVLDRVCKRP 276


>gi|219684819|ref|ZP_03539761.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii PBr]
 gi|219671764|gb|EED28819.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii PBr]
          Length = 299

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 85/207 (41%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + +  T   +  ++ +S++       L     R  + L PILD+MQ++P   +L   +
Sbjct: 84  LWKASMDTIAIIFVSVFVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F             +AIFA     +  +       +  +  ++ E ++SF  S  +  
Sbjct: 144 PFFGMG--------TASAIFATIIFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRIL 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +   
Sbjct: 196 LQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFGE 248

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L + L ++ +  + D+++    I +S
Sbjct: 249 GLISGLAVVIIAIILDRVMQSIFIKFS 275



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +F         + +  + +  I+  F +     +      T+  + V + ++ I+ IP+
Sbjct: 50  IVFILTACLLSFVFLKKRLVFLILPGFFFILHFDLWKASMDTIAIIFVSVFVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRVM 267


>gi|56698439|ref|YP_168813.1| sulfonate ABC transporter, permease protein, putative [Ruegeria
           pomeroyi DSS-3]
 gi|56680176|gb|AAV96842.1| sulfonate ABC transporter, permease protein, putative [Ruegeria
           pomeroyi DSS-3]
          Length = 262

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 16/254 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R  F     +  + +     + +    ++          ++           +  + 
Sbjct: 2   PELRVPFRGGGFRPEARRGTGIAVFLLLLFLIEWGTRTGWITNLTLPRPSDVAATLGDLA 61

Query: 381 WLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
             G +      ++ R+ V   +     + VG+ IG   +I + + P    +   P     
Sbjct: 62  RSGALWTHLLPSLSRLAVGSALGISAGVGVGVLIGLFSYIRAGLVPLVAAIFPIPKIALL 121

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V        +       L+  GT    +                +  SF +  W   
Sbjct: 122 PLFVIWFGIDEGSK----YALIALGTFTPTVVATYGAVDNVDRGLIRMGQSFGLGWWSIV 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R I+LPG  P  ++G   +        + +E+           G+GAYI ++        
Sbjct: 178 RKIVLPGALPGILSGLRVSLAIGIILLVAAEMLG------AEHGIGAYILQAGALYDLER 231

Query: 555 VVLGVLIMCCFVLA 568
           +  GV+I+ C  + 
Sbjct: 232 LFAGVVILSCLGVL 245



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 21/264 (7%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLD 57
            +  PF      P         + + ++ ++  G +           P D+   +     
Sbjct: 3   ELRVPFRGGGFRPEARRGTGIAVFLLLLFLIEWGTRTGWITNLTLPRPSDVAATLGDLAR 62

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L  +   +  R+     + +        L      +   LVP++  +  IP +  L 
Sbjct: 63  SGALWTHLLPSLSRLAVGSALGISAGVGVGVLIGLFSYIRAGLVPLVAAIFPIPKIALLP 122

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++F      K           I          + Y ++ N+ R L  + +SF L  W
Sbjct: 123 LFVIWFGIDEGSKYA--------LIALGTFTPTVVATYGAVDNVDRGLIRMGQSFGLGWW 174

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P ++PG++  + +S++ G   +VA+EM+          GIG+YI  A    D
Sbjct: 175 SIVRKIVLPGALPGILSGLRVSLAIGIILLVAAEMLG------AEHGIGAYILQAGALYD 228

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
           L  +   ++ +  +  L    + +
Sbjct: 229 LERLFAGVVILSCLGVLTSWAIGK 252


>gi|330686293|gb|EGG97903.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus epidermidis
           VCU121]
          Length = 504

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 81/216 (37%), Gaps = 20/216 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ +       L  K++++  +++ I  I+Q+IP L  L  
Sbjct: 13  GQLLSTIIEHIQISFIALLIATIIAVPLGILLTKTKKISEIVMNIAAILQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPLFGIG--------RLPAIIALVVYALLPILRNTYTGVKEVDPSLVEAAKGIGMKPIR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   L +P +MP ++  +  +M           ++++G   +    IG+     +    +
Sbjct: 125 RLTKLELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
                +++ +  +      +LF  ++ +  K   ++
Sbjct: 173 DRNDASLILIGAIPAALLAILFDIVLRFMEKLSYKK 208



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+II +P+GI +     IS  +   A +L   P+     L++       L   +
Sbjct: 27  FIALLIATIIAVPLGILLTKTKKISEIVMNIAAILQTIPSLALLGLMIPLFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGVKEVDPSLVEAAKGIGMKPIRRLTKLELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDASLILIGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -IVLRFMEKLSYKKL 209


>gi|56807739|ref|ZP_00365604.1| COG1732: Periplasmic glycine betaine/choline-binding (lipo)protein
           of an ABC-type transport system (osmoprotectant binding
           protein) [Streptococcus pyogenes M49 591]
 gi|209559415|ref|YP_002285887.1| L-proline glycine betaine binding ABC transporter protein proX /
           Osmotic adaptation [Streptococcus pyogenes NZ131]
 gi|209540616|gb|ACI61192.1| L-proline glycine betaine binding ABC transporter protein proX /
           Osmotic adaptation [Streptococcus pyogenes NZ131]
          Length = 508

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 195

Query: 571 RFL 573
             L
Sbjct: 196 SLL 198


>gi|257866004|ref|ZP_05645657.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC30]
 gi|257872337|ref|ZP_05651990.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC10]
 gi|257799938|gb|EEV28990.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC30]
 gi|257806501|gb|EEV35323.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC10]
          Length = 513

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 16/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++     A      +R   V + I  ++Q+IP L  L  
Sbjct: 13  GELLTAVFEHLSLSIIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +     P         A+ A+    +  +  + Y  L  I   +EE + +F +S  +
Sbjct: 73  LIPFVGIGTPP--------ALIALVIYALLPIFQNTYIGLSEIDPSIEEAAAAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  +  ++         + +I  G       G+GS+I L I     
Sbjct: 125 RLIKVELPIALPVIISGIRTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
              L   +    +  ++  L+ R +     ++ L
Sbjct: 178 ELTLIGAIGSALLAIVFSTLI-RYLQHLKPRYTL 210



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A +I +P+ IW+      +        +L   P+     L++  V        +
Sbjct: 27  IIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGLLIPFVGIGTPPALI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G S      +E A++F ++  R    + LP   P  ++G 
Sbjct: 87  ALVIYALL----PIFQNTYIGLSEIDPSIEEAAAAFGMSRMRRLIKVELPIALPVIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG++I    ++ +    ++G +      +  +
Sbjct: 143 RTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAPELTLIGAIGSALLAIVFS 195

Query: 571 RFL 573
             +
Sbjct: 196 TLI 198


>gi|220924746|ref|YP_002500048.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949353|gb|ACL59745.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 281

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 94/294 (31%), Gaps = 24/294 (8%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N +   G++            K   R  G+     P   L L         +D  +   
Sbjct: 5   ANTIAGAGFADTASAVRAVRAPKVRRRGFGLTGLVLPLTILVLWEASATFRWIDPVFLPA 64

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
              VA    W+ +              +      ++  V    +  S   I +GI  G  
Sbjct: 65  PQLVA-AAFWKMLT----------AQNLALDFLASISIVGQAFLYGSAAAILLGIAAGLS 113

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     P    +   P   + PL+V  +            L++     + +  N + G
Sbjct: 114 RRVEEFFGPTFDTIRHIPGIAWLPLIVLWLGIGA----PAKVLVIAKSVFFPVFLNTLQG 169

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 +  E+A +  +T W+  R ++LP   P  +     A G AW   +V+E  S   
Sbjct: 170 IRNVDKNHVELARALTLTRWQLVRRVVLPSALPSILVSLRYAAGLAWALVVVAEGLSG-- 227

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLYGT 582
                 GLG  I  +       ++++ ++++     A++R    +   L  +  
Sbjct: 228 ----LEGLGFLIFRAQGLLLTDQLMVCMVVIGLVGFAIDRGMALVQRRLLRWKQ 277



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P+ +       L   +L      +   +  A +       +    A  SRR+     
Sbjct: 62  LPAPQLVAAAFWKMLTAQNLALDFLASISIVGQAFLYGSAAAILLGIAAGLSRRVEEFFG 121

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D ++ IP + +L   V++     P KV+    +  F +F         +  Q + N+
Sbjct: 122 PTFDTIRHIPGIAWLPLIVLWLGIGAPAKVLVIAKSVFFPVF--------LNTLQGIRNV 173

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++  E++R+  L+ WQ    + +P ++P ++ ++  +    W  VV +E +        
Sbjct: 174 DKNHVELARALTLTRWQLVRRVVLPSALPSILVSLRYAAGLAWALVVVAEGLSG------ 227

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271
           L G+G  I  A        ++  M+ +  V F  D+   L+ R ++ W   F 
Sbjct: 228 LEGLGFLIFRAQGLLLTDQLMVCMVVIGLVGFAIDRGMALVQRRLLRWKQGFE 280


>gi|21910328|ref|NP_664596.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS315]
 gi|21904524|gb|AAM79399.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS315]
          Length = 508

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 195

Query: 571 RFL 573
             L
Sbjct: 196 SLL 198


>gi|257875632|ref|ZP_05655285.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC20]
 gi|257809798|gb|EEV38618.1| ABC-type proline/glycine betaine transporter [Enterococcus
           casseliflavus EC20]
          Length = 513

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 16/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++     A      +R   V + I  ++Q+IP L  L  
Sbjct: 13  GELLTAVFEHLSLSIIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +     P         A+ A+    +  +  + Y  L  I   +EE + +F +S  +
Sbjct: 73  LIPFVGIGTPP--------ALIALVIYALLPIFQNTYIGLSEIDPSIEEAAAAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  +  ++         + +I  G       G+GS+I L I     
Sbjct: 125 RLIKVELPIALPVIISGIRTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
              L   +    +  ++  L+ R +     ++ L
Sbjct: 178 ELTLIGAIGSALLAIVFSTLI-RYLQHLKPRYTL 210



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A +I +P+ IW+      +        +L   P+     L++  V        +
Sbjct: 27  IIALLVAIVIAVPLAIWLVNHKRAAEVGLQITSVLQTIPSLALLGLLIPFVGIGTPPALI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G S      +E A++F ++  R    + LP   P  ++G 
Sbjct: 87  ALVIYALL----PIFQNTYIGLSEIDPSIEEAAAAFGMSRMRRLIKVELPIALPVIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG++I    ++ +    ++G +      +  +
Sbjct: 143 RTALVLIIGTATLAALIGAG-------GLGSFILLGIDRNAPELTLIGAIGSALLAIVFS 195

Query: 571 RFL 573
             +
Sbjct: 196 TLI 198


>gi|260867106|ref|YP_003233508.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|257763462|dbj|BAI34957.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str.
           11128]
          Length = 263

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLAPIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLAPIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|297563458|ref|YP_003682432.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847906|gb|ADH69926.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 409

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L A  I+++       LAA +  +  ++ P+LD+MQ++P   +L   + +F 
Sbjct: 215 AMDTLGLVLVASAIAVVIAIPIGVLAAYNDLVSKIVKPVLDLMQTLPAFVYLIPAIFFFS 274

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     +FA+               +  I ++L E   SF  S  +    + 
Sbjct: 275 ---IGAVPGVVATIVFAMPPG-----VRLTELGIRQIDKELVEAGESFGASPTKVLTGIQ 326

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +   +  G   VV + M+  G       G+GS +   I   D      A
Sbjct: 327 LPLALPTIMAGVNQVIMLGLSMVVIAGMVGAG-------GLGSEVYQGITRNDGALGFEA 379

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +    D+L
Sbjct: 380 GIAVVILAIFLDRL 393



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 11/214 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             W+   + +   T    +        T+  V+V   IA +I IP+G+   +   +S  +
Sbjct: 191 AGWRMGLFGLIALTLVASVGQWTNAMDTLGLVLVASAIAVVIAIPIGVLAAYNDLVSKIV 250

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +P   L+   PA V+    +   S   +   +   +          +     G      +
Sbjct: 251 KPVLDLMQTLPAFVYLIPAIFFFSIGAVPGVVATIVF----AMPPGVRLTELGIRQIDKE 306

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E   SF  +  +    I LP   P  + G         +  +++ +   G       G
Sbjct: 307 LVEAGESFGASPTKVLTGIQLPLALPTIMAGVNQVIMLGLSMVVIAGMVGAG-------G 359

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           LG+ + +   +          + +    + L+R 
Sbjct: 360 LGSEVYQGITRNDGALGFEAGIAVVILAIFLDRL 393


>gi|183601456|ref|ZP_02962826.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683510|ref|YP_002469893.1| binding-protein-dependent transport systems inner membrane
           component precursor [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241191044|ref|YP_002968438.1| binding-protein-dependent transport systems, inner membrane
           component [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196450|ref|YP_002970005.1| binding-protein-dependent transport systems, inner membrane
           component [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183219062|gb|EDT89703.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621160|gb|ACL29317.1| binding-protein-dependent transport systems inner membrane
           component precursor [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249436|gb|ACS46376.1| binding-protein-dependent transport systems, inner membrane
           component [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251004|gb|ACS47943.1| binding-protein-dependent transport systems, inner membrane
           component [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295794033|gb|ADG33568.1| binding-protein-dependent transport systems, inner membrane
           component [Bifidobacterium animalis subsp. lactis V9]
          Length = 302

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 11/269 (4%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
             S  +  P + + K   R              + C+    + ++ + W     G A   
Sbjct: 26  ARSAAYAVPAAEHTKTASRIGTRFIPWHHGRAPRFCALWASTVLIVLAWALATGGPAHNR 85

Query: 360 AWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  S G +            ++    ++++RV + + +  +  +P GI  G      + +
Sbjct: 86  SLPSPGEVWQALLALHSEGLLLPSIGVSLYRVSLGVALGVVTAVPAGIIAGSSTIGHAIM 145

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
                +L A P     PL++  +             L+  G    I  NV  G       
Sbjct: 146 DKPIHMLRAVPFPALSPLLIVLLGIGET----MKVALIAIGAFALIYVNVRDGVRGIDPK 201

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+A ++H+     +  I+L G  P ++TG   A   +W A +  E  +       + G
Sbjct: 202 LLELAQAYHLPKRTVFAKILLRGTLPRFMTGLRFALTVSWIALVTCETVN------SSAG 255

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G  ++ S +     ++VL +++     L
Sbjct: 256 IGYILSRSQQFYRTDQMVLCIVLYAFLGL 284



 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 82/248 (33%), Gaps = 14/248 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R        +  VL   +        +    P ++   +        L      +  R
Sbjct: 57  APRFCALWASTVLIVLAWALATGGPAHNRSLPSPGEVWQALLALHSEGLLLPSIGVSLYR 116

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +   + + ++       +A  S     ++   + +++++P        +V        KV
Sbjct: 117 VSLGVALGVVTAVPAGIIAGSSTIGHAIMDKPIHMLRAVPFPALSPLLIVLLGIGETMKV 176

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   I+         ++   +  I   L E+++++ L     F  + +  ++P 
Sbjct: 177 ALIAIGAFALIYV--------NVRDGVRGIDPKLLELAQAYHLPKRTVFAKILLRGTLPR 228

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +  +++  W  +V  E +          GIG  ++ + +      ++  ++    +
Sbjct: 229 FMTGLRFALTVSWIALVTCETVNSSA------GIGYILSRSQQFYRTDQMVLCIVLYAFL 282

Query: 252 IFLYDQLL 259
               + L+
Sbjct: 283 GLFSEWLV 290


>gi|288556230|ref|YP_003428165.1| proline/glycine betaine ABC transporter permease [Bacillus
           pseudofirmus OF4]
 gi|288547390|gb|ADC51273.1| proline/glycine betaine ABC transporter permease [Bacillus
           pseudofirmus OF4]
          Length = 513

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 85/209 (40%), Gaps = 27/209 (12%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L   +L ++   +    L +++I++        L ++ +++   ++ I  ++Q+IP L 
Sbjct: 16  DLLWIALWEHIQLS----LISLLIAVFIAVPLGVLLSRKQKMAEFIIGITAVLQTIPSLA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L F +++               AI A+    +  +  + Y  +  +   + E +R   +
Sbjct: 72  LLGFMILFVGIG--------TTPAIIALTAYALLPILRNTYTGISEVDPAIREAARGMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIA 230
           + +++   + +P +MP ++  +  SM           +++VG       I   G+G  I 
Sbjct: 124 NSYRRLMRVEMPIAMPTVMAGIRTSM-----------VLIVGTATLAALIGAGGLGDLIM 172

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             I+  +   IL   +    +   +D +L
Sbjct: 173 TGIQRANNEYILLGAIPAALLALFFDFVL 201



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 12/185 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA  I +P+G+ +  +  ++  I     +L   P+      ++  V        +
Sbjct: 30  LISLLIAVFIAVPLGVLLSRKQKMAEFIIGITAVLQTIPSLALLGFMILFVGIGTTPAII 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+   +      IL N   G S      +E A    +  +R    + +P   P  + G 
Sbjct: 90  ALTAYALL----PILRNTYTGISEVDPAIREAARGMGMNSYRRLMRVEMPIAMPTVMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG  I    ++ +   ++LG +      L  +
Sbjct: 146 RTSMVLIVGTATLAALIGAG-------GLGDLIMTGIQRANNEYILLGAIPAALLALFFD 198

Query: 571 RFLWH 575
            F+  
Sbjct: 199 -FVLR 202


>gi|325290914|ref|YP_004267095.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966315|gb|ADY57094.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 258

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 82/230 (35%), Gaps = 11/230 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           FW      +  G+   +   I   F       +     I++ RV++  +++ ++ +P+G 
Sbjct: 24  FWEIGAGIIPEGVISPASDAIAAVFESAASGLLWTQTLISLERVILGFLLSLLLGVPLGF 83

Query: 407 WIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
            +G         + PF +           P+ +               +++ + T W +L
Sbjct: 84  LLGTFFKSTEKVLLPFMRACEKLNPFAIIPIFMIFFGIGTAEK----VVVIFWSTLWPVL 139

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           FN +AGA     +   +  S   T W   R +I P   P    G   A   A+   I SE
Sbjct: 140 FNTMAGARNIDQNLLRMVRSMGATRWELLRKVIFPYTLPNIFIGIEFAAQVAFFMIIASE 199

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           V         +TGLG Y   S  K   P +   VL +    + +N     
Sbjct: 200 VIG------ASTGLGWYYTSSATKYDLPLMYGIVLYITVLGIGVNVIFAR 243



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 84/220 (38%), Gaps = 15/220 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLV 101
           +   D +  V  +     L      +  R++   ++SLL       L     +    VL+
Sbjct: 38  SPASDAIAAVFESAASGLLWTQTLISLERVILGFLLSLLLGVPLGFLLGTFFKSTEKVLL 97

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   + +     +   +++F      K        +  IF S +W + F+      NI
Sbjct: 98  PFMRACEKLNPFAIIPIFMIFFGIGTAEK--------VVVIFWSTLWPVLFNTMAGARNI 149

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++L  + RS   + W+    +  P+++P +   +  +    +F ++ASE+I        
Sbjct: 150 DQNLLRMVRSMGATRWELLRKVIFPYTLPNIFIGIEFAAQVAFFMIIASEVIGAST---- 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G Y   +  + DL  +   +L +  +    + +  R
Sbjct: 206 --GLGWYYTSSATKYDLPLMYGIVLYITVLGIGVNVIFAR 243


>gi|313905100|ref|ZP_07838469.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313470003|gb|EFR65336.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 252

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M R ++   ++ +  + +G+ +G    I   I P  Q+L       + P VV  V  
Sbjct: 59  LTSMRRFLIGYGLSVLAAVLLGLLLGCFGEIFKYINPLLQVLRPISPTAWMPFVVLLVGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +++     + +L    +        +  V+ +F I        +ILP IF
Sbjct: 119 GDL----PAIVIIFIAAFFPVLLTTASAVGKIDPIYFRVSRNFGIRQPALLWKVILPAIF 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P        + G AW   +  E+          +GLG  I ++        ++  +L++ 
Sbjct: 175 PSIANAMHVSLGSAWIFLVAGEMVG------AQSGLGYQIIDARNNVRADYLLATILVIG 228

Query: 564 CFVLALNRFLWH 575
              L L+  +  
Sbjct: 229 LIGLFLDFVIGR 240



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 18/253 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           ++I    + +++ +L++ +  I      +       P      +   +    L +    +
Sbjct: 2   KKILNIRYAVVSIILLLAVWEIAFLLSDYSSALFPSPLMAFKALGEMVVSGQLWESILTS 61

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L    +S+L   +   L      +   + P+L +++ I    ++ F V+       
Sbjct: 62  MRRFLIGYGLSVLAAVLLGLLLGCFGEIFKYINPLLQVLRPISPTAWMPFVVLLVGIG-- 119

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI  IF +  + +  +   ++  I      VSR+F +      W + +P  
Sbjct: 120 ------DLPAIVIIFIAAFFPVLLTTASAVGKIDPIYFRVSRNFGIRQPALLWKVILPAI 173

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P +   M +S+   W F+VA EM+          G+G  I  A        +L  +L +
Sbjct: 174 FPSIANAMHVSLGSAWIFLVAGEMVG------AQSGLGYQIIDARNNVRADYLLATILVI 227

Query: 249 LGVIFLYDQLLFR 261
             +    D ++ R
Sbjct: 228 GLIGLFLDFVIGR 240


>gi|326772164|ref|ZP_08231449.1| glycine betaine/L-proline ABC transporter, permease protein
           [Actinomyces viscosus C505]
 gi|326638297|gb|EGE39198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Actinomyces viscosus C505]
          Length = 292

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 98/238 (41%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LLA   ++ ++  +L      +    +   V   L +       A  T + +  A V +L
Sbjct: 50  LLAIPPLVMVVVFVLIAWLAKSWRLAVGTAVTFLLIISMGQWTNAMETLVLVTLATVTAL 109

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F       AA+++ +  ++ P+LD+MQ++P   +L  +V++F     G V G     IF
Sbjct: 110 IFAIPLGIWAARNKYVSALVRPVLDLMQTMPAFVYLIPSVLFFS---IGVVPGMFATLIF 166

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+               +  + ++  E  RSF  + WQ    + +P ++P ++  +   +
Sbjct: 167 AMPPG-----VRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAGVNQVI 221

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  V + M+          G+G  +  A+   D+     A L+++ +    D++
Sbjct: 222 MLALSMAVIAGMV-------GADGLGKEVVKALATIDIAKGTEAGLSIVFLAIFLDRV 272



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 11/223 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V    +  +W+        F     +        T+  V +  + A I  IP+GIW 
Sbjct: 60  VVFVLIAWLAKSWRLAVGTAVTFLLIISMGQWTNAMETLVLVTLATVTALIFAIPLGIWA 119

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
               ++S+ ++P   L+   PA V+    V   S   +       +          +   
Sbjct: 120 ARNKYVSALVRPVLDLMQTMPAFVYLIPSVLFFSIGVVPGMFATLIF----AMPPGVRMT 175

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G      +  E   SF  T W+  R I LP   P  + G       A + ++++ +  
Sbjct: 176 ELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAGVNQVIMLALSMAVIAGMVG 235

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                    GLG  + ++       +     L +    + L+R
Sbjct: 236 -------ADGLGKEVVKALATIDIAKGTEAGLSIVFLAIFLDR 271


>gi|239636663|ref|ZP_04677665.1| choline transporter [Staphylococcus warneri L37603]
 gi|239598018|gb|EEQ80513.1| choline transporter [Staphylococcus warneri L37603]
          Length = 504

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 80/216 (37%), Gaps = 20/216 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ +       L  K+++   +++ I  I+Q+IP L  L  
Sbjct: 13  GQLLSTIIEHIQISFIALLIATIIAVPLGILLTKTKKTSEIVMNIAAILQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPLFGIG--------RLPAIIALVVYALLPILRNTYTGVKEVDPSLIEAAKGIGMKPIR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P +MP ++  +  +M           ++++G   +    IG+     +    +
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
                +++ +  +      +LF  ++ +  K   ++
Sbjct: 173 DRNDASLILIGAIPAALLAILFDIILRFMEKLSYKK 208



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+II +P+GI +      S  +   A +L   P+     L++       L   +
Sbjct: 27  FIALLIATIIAVPLGILLTKTKKTSEIVMNIAAILQTIPSLALLGLMIPLFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGVKEVDPSLIEAAKGIGMKPIRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDASLILIGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             L   +     + L
Sbjct: 196 IIL-RFMEKLSYKKL 209


>gi|158423976|ref|YP_001525268.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330865|dbj|BAF88350.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 269

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 114/278 (41%), Gaps = 21/278 (7%)

Query: 3   LYNILPPFISRRIF--PNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDV 58
           + +  P   +   F  P++  +   V++I +  +++ L  I    +P      +    + 
Sbjct: 1   MASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEG 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q A  TT+  +S   +S L     A + A SR +   L P+L   QSIP +     
Sbjct: 61  GMLLQEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            VV+F      KVI A L  +F +  + V        Q   ++  D+ +++R+ + S  Q
Sbjct: 121 FVVWFGFGMVPKVISAFLLGVFPVIVAGV--------QGFKSVEGDMRDLARAMKASKLQ 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P +MP +   + +S++      V  E +          G+G  +  +I   +L
Sbjct: 173 TFAMVSLPHAMPAIFAGLKVSVTLAVVGAVVGEFVGANS------GLGFVLQRSIGNFEL 226

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNKFRLE 273
             +  A++ +  +  +      ++ R  + W    R +
Sbjct: 227 PTMFAALILLALIGVVLFWVVDVIERLCVPWHASQRQD 264



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T    V    ++++I IP+ + I     +   + P      + P    
Sbjct: 58  TEGGMLLQEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAI 117

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V    +  +   +   LL +F     ++   + G  +   D +++A +   +  + 
Sbjct: 118 APLFVVWFGFGMVPKVISAFLLGVF----PVIVAGVQGFKSVEGDMRDLARAMKASKLQT 173

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + LP   P    G   +   A   ++V E           +GLG  +  S      P
Sbjct: 174 FAMVSLPHAMPAIFAGLKVSVTLAVVGAVVGEFVG------ANSGLGFVLQRSIGNFELP 227

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    + L
Sbjct: 228 TMFAALILLALIGVVL 243


>gi|54023795|ref|YP_118037.1| putative transporter [Nocardia farcinica IFM 10152]
 gi|54015303|dbj|BAD56673.1| putative transporter [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R  + + +  +I + + +  G      + +    Q+  A P     PL +     
Sbjct: 92  LTSLQRAGIGLALGVVIGVVLALIAGLSRVGEALLDGPIQIKRAIPTLALIPLFIVWFGI 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +++       +  N  A   +  + + E+A +  ++   + R + LPG  
Sbjct: 152 G----EEMKLIVITLSVFVPVYINTHAYLRSVDSRYVELAETVRLSRAAFVRRVALPGSL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +  G   A   +W A +V E  +       T+G+G  + ++   G    +V+G++I  
Sbjct: 208 PGFFIGLRLAVTISWLALVVVEQVN------ATSGIGYLMTQARTYGQIDVIVVGLVIYG 261

Query: 564 CFVL 567
              L
Sbjct: 262 LLGL 265



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       +    L      +  R    + + ++   V A +A  SR    +L 
Sbjct: 68  LPAPWTVAQTAGELIADGRLQSNLLTSLQRAGIGLALGVVIGVVLALIAGLSRVGEALLD 127

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + I ++IP L  +   +V+F      K+I   L+    ++         + +  L ++
Sbjct: 128 GPIQIKRAIPTLALIPLFIVWFGIGEEMKLIVITLSVFVPVY--------INTHAYLRSV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++ + RLS       + +P S+PG    + ++++  W  +V  E +        
Sbjct: 180 DSRYVELAETVRLSRAAFVRRVALPGSLPGFFIGLRLAVTISWLALVVVEQV------NA 233

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             GIG  +  A     +  I+  ++    +    D   + + R  + W  
Sbjct: 234 TSGIGYLMTQARTYGQIDVIVVGLVIYGLLGLFGDIAVRAVERKALSWRQ 283


>gi|15618920|ref|NP_225206.1| ABC transporter permease [Chlamydophila pneumoniae CWL029]
 gi|15836543|ref|NP_301067.1| ABC transporter permease [Chlamydophila pneumoniae J138]
 gi|16752014|ref|NP_445380.1| ABC transporter, permease protein, putative [Chlamydophila
           pneumoniae AR39]
 gi|4377342|gb|AAD19149.1| ABC transporter permease [Chlamydophila pneumoniae CWL029]
 gi|8163511|gb|AAF73711.1| ABC transporter, permease protein, putative [Chlamydophila
           pneumoniae AR39]
 gi|8979385|dbj|BAA99219.1| ABC transporter permease [Chlamydophila pneumoniae J138]
          Length = 591

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 81/216 (37%), Gaps = 16/216 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I      +L +  L   A  T   +L    +++  + V AT+    +    +L P
Sbjct: 34  PPPSSIASSTLQSLPL--LLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQP 91

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++Q  P+       V++F             A I     +  + +T ++YQ + + P
Sbjct: 92  LFILLQCTPMFALAPLIVLWFGWGIG--------AVIVPTALTIFFPLTLTIYQGILSTP 143

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +L E       + +Q    L +P ++P +   + +++    F  +A E +         
Sbjct: 144 EELIEQFVLCGATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQ 197

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  +  + +  ++      + T+  +     Q+
Sbjct: 198 SGLGILMLESRRNYEMELAFAGLATLSILTLSLFQI 233



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +   T Q +  ++     T+  ++    +A  + I +   +         +QP   LL  
Sbjct: 39  IASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQPLFILLQC 98

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V    +      +  +L + F     +   +  G  + P +  E      
Sbjct: 99  TPMFALAPLIVLWFGWGIGAVIVPTALTIFF----PLTLTIYQGILSTPEELIEQFVLCG 154

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T ++    + +P   P+  +G   A G A  A+I  E  +        +GLG  + ES 
Sbjct: 155 ATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQSGLGILMLESR 208

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                     G+  +    L+L
Sbjct: 209 RNYEMELAFAGLATLSILTLSL 230


>gi|139473775|ref|YP_001128491.1| glycine/betaine ABC transporter [Streptococcus pyogenes str.
           Manfredo]
 gi|134272022|emb|CAM30261.1| ABC-type glycine betaine transport system protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 508

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +    ++I   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----VMIIGTATLA---SLIGAGGLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 195

Query: 571 RFL 573
             L
Sbjct: 196 SLL 198


>gi|300691672|ref|YP_003752667.1| alkanesulfonate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
 gi|299078732|emb|CBJ51391.1| alkanesulfonate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 264

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 98/263 (37%), Gaps = 18/263 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           RR        LA ++V  +         +    P D+            L ++ + +T R
Sbjct: 13  RRRLAPWLVPLALLVVWQVSAQWGWLSNRVLPAPLDVAAAAIGLARSGELWKHVAVSTWR 72

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    I          L    R    +L   L ++++IP+L  +   +++F        
Sbjct: 73  ALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGID----- 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + +P ++P 
Sbjct: 128 ---ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGALPQ 184

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E +          GIG     A +      +L  +L    +
Sbjct: 185 ILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLGILLYALL 238

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             L D L   L R  + W   ++
Sbjct: 239 GKLADLLSRALERFWLRWHPGYQ 261



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 76/226 (33%), Gaps = 17/226 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFR 389
            +R++  L      VV  V+    W S   +                  +     ++ +R
Sbjct: 13  RRRLAPWLVPLALLVVWQVSAQWGWLSNRVLPAPLDVAAAAIGLARSGELWKHVAVSTWR 72

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            ++   I   + + +G+  G      + +    Q++   P     PLV+           
Sbjct: 73  ALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGI----DE 128

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                L+  G  + I  N   G  +      E+A S+ ++  + +R +ILPG  P  + G
Sbjct: 129 SAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVILPGALPQILVG 188

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
              + G  W   IV+E  S         G+G     + E      V
Sbjct: 189 VRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 228


>gi|228959019|ref|ZP_04120720.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229128128|ref|ZP_04257110.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-Cer4]
 gi|229145361|ref|ZP_04273750.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST24]
 gi|228638200|gb|EEK94641.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST24]
 gi|228655403|gb|EEL11259.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-Cer4]
 gi|228800680|gb|EEM47596.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 196

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 9   TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 68

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 69  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 120

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 121 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 173

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 174 GLAIVVIAIILDRI 187



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+  +II+ I+ IP+GI        S  ++P    +   PA V+    ++      
Sbjct: 12  TLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGV 71

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +          +     G    P D  E A++F  T  +    + LP     
Sbjct: 72  VPGIIASVIF----AMPPTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGT 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   + +  + + +           GLG  +  S  + +        L +   
Sbjct: 128 IMAGVNQSIMLSLSMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVI 180

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 181 AIILDRI 187


>gi|188586657|ref|YP_001918202.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351344|gb|ACB85614.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 282

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 101/238 (42%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIV-DIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+     + ++ I L G +  T+   ++  +    +    L      T   +++++VIS+
Sbjct: 48  LIWLPWWLFVLFIFLLGWKLRTISSGVLFSVFLFVIGTFGLWVPMMETLAIIVTSVVISI 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L A +R + +V+ PILD MQ++P   +L   ++ F            + A+F
Sbjct: 108 VLGIPIGILMAYNRIMSVVITPILDGMQTMPSFVYLIPAIILFHMG--------TVPAVF 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A     +  +       +  + +++ E  +SF  S  Q    + +P ++P ++     + 
Sbjct: 160 ATIIYAIPPVIRLTDLGIRKVSKEMVEAGKSFGASPVQLLAKVQIPQALPTILAGTNQTT 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VV + MI          G+G  + +AI   D+   + A L+++ +  + D+L
Sbjct: 220 MMALAMVVIAAMI-------GADGLGMEVYIAINRIDVARGVEAGLSIVFLAIIIDRL 270



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 91/281 (32%), Gaps = 14/281 (4%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +R     +  F   + + V  L   L  +        L L SN     +   +W  V+  
Sbjct: 1   MREFPDITIEFGQYVESFVNWLDTNLEFLFDFIFYVILNLISNIEGFLIWLPWWLFVLFI 60

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             +G   ++I   V    +  V+    L      T+  +V  ++I+ ++ IP+GI + + 
Sbjct: 61  FLLGWKLRTISSGVLFSVFLFVIGTFGLWVPMMETLAIIVTSVVISIVLGIPIGILMAYN 120

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +S  I P    +   P+ V+    +           +      I      ++     G
Sbjct: 121 RIMSVVITPILDGMQTMPSFVYLIPAIILFHMG----TVPAVFATIIYAIPPVIRLTDLG 176

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 +  E   SF  +  +    + +P   P  + G       A    +++ +     
Sbjct: 177 IRKVSKEMVEAGKSFGASPVQLLAKVQIPQALPTILAGTNQTTMMALAMVVIAAMIG--- 233

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  +  +  +      V   L +    + ++R 
Sbjct: 234 ----ADGLGMEVYIAINRIDVARGVEAGLSIVFLAIIIDRL 270


>gi|27467421|ref|NP_764058.1| choline transporter [Staphylococcus epidermidis ATCC 12228]
 gi|57866321|ref|YP_187980.1| ABC transporter permease [Staphylococcus epidermidis RP62A]
 gi|251810154|ref|ZP_04824627.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875698|ref|ZP_06284569.1| ABC transporter, substrate-binding protein, QAT family
           [Staphylococcus epidermidis SK135]
 gi|293368182|ref|ZP_06614811.1| osmoprotectant ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314964|gb|AAO04100.1|AE016745_199 choline transporter [Staphylococcus epidermidis ATCC 12228]
 gi|57636979|gb|AAW53767.1| ABC transporter, permease protein [Staphylococcus epidermidis
           RP62A]
 gi|251806325|gb|EES58982.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295725|gb|EFA88248.1| ABC transporter, substrate-binding protein, QAT family
           [Staphylococcus epidermidis SK135]
 gi|291317605|gb|EFE58022.1| osmoprotectant ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736733|gb|EGG72998.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus epidermidis
           VCU028]
 gi|329737931|gb|EGG74155.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus epidermidis
           VCU045]
          Length = 504

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A+ I+ L     A L  K+++L  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLFSTIIEHIQLSFIALFIATLIAVPIAILLTKTKKLSEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------RLPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  ++D  + R M   S K
Sbjct: 173 DRNNSALILIGAIPAALLAIIFD-FILRYMERLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA++I +P+ I +     +S  +   A +L   P+     L++       L   +
Sbjct: 27  FIALFIATLIAVPIAILLTKTKKLSEIVMNIAAVLQTIPSLALLGLMIPIFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPLRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNSALILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
            F+   +     + L
Sbjct: 196 -FILRYMERLSYKKL 209


>gi|296140671|ref|YP_003647914.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296028805|gb|ADG79575.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 296

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 82/266 (30%), Gaps = 13/266 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
              P    + +      ++       ++       ++         V+    +   W  +
Sbjct: 25  ALDPDHELLPRPATRRALVDSRPIGAWILAGPALVIALWAVGSATGVIPDTVLSAPWTVL 84

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                  T      +      +  R +V  ++   + + + ++ G      + I     +
Sbjct: 85  RTAW---TLALDGSLWSNILASAQRAIVGGVLGVALAVVLALFSGLTRPGEALIDGTVTI 141

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
             A PA    PL +               +L+       +  N  AG       + E+A 
Sbjct: 142 YRAIPALALLPLFIVWFGIG----EEMKIVLITLAVATPVYLNTHAGLRGIDRKYVELAE 197

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +  +    + R+I +PG  P + TG       AW A +V E          + G+G  + 
Sbjct: 198 TVGLRRAAFVRHIAIPGALPGFFTGLRLGATVAWLALVVVEQVG------ASDGIGYLMY 251

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++   G    +V+G+ +        +
Sbjct: 252 KARLYGLTDVIVVGLAVYAVLGFGTD 277



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 92/265 (34%), Gaps = 23/265 (8%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETT---------VPRDIVDIVPI 54
           + +LP   +RR   +   + A++L    + I L  +   T          P  ++     
Sbjct: 30  HELLPRPATRRALVDSRPIGAWILAGPALVIALWAVGSATGVIPDTVLSAPWTVLRTAWT 89

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL      +  R +   V+ +    V A  +  +R    ++   + I ++IP L 
Sbjct: 90  LALDGSLWSNILASAQRAIVGGVLGVALAVVLALFSGLTRPGEALIDGTVTIYRAIPALA 149

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +V+F           E   I  I  +    +  + +  L  I R   E++ +  L
Sbjct: 150 LLPLFIVWFGIG--------EEMKIVLITLAVATPVYLNTHAGLRGIDRKYVELAETVGL 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
                  ++ +P ++PG    + +  +  W  +V  E +   D      GIG  +  A  
Sbjct: 202 RRAAFVRHIAIPGALPGFFTGLRLGATVAWLALVVVEQVGASD------GIGYLMYKARL 255

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
                 I+  +     + F  D  +
Sbjct: 256 YGLTDVIVVGLAVYAVLGFGTDLAV 280


>gi|222480558|ref|YP_002566795.1| binding-protein-dependent transport systems inner membrane
           component [Halorubrum lacusprofundi ATCC 49239]
 gi|222453460|gb|ACM57725.1| binding-protein-dependent transport systems inner membrane
           component [Halorubrum lacusprofundi ATCC 49239]
          Length = 267

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 20/259 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR+   +  ++ FV+V  +I++          P  + D         ++      +   
Sbjct: 23  PRRLLRGLAGVVGFVVVWHLISL-TQAAYVLPSPVAVGDAFAEEFASGTMTTALWSSIRH 81

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   V+            + S  L  V  P++  ++ +P L  + F + +F   + G  
Sbjct: 82  WIPGTVVGTGLGVAAGVAFSWSGLLDDVTAPLVRTLRPVPPLALIGFAIAWFGINHAG-- 139

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMP 190
                 A F I     W   ++ Y ++  +  DL +V R+  + G       + +P SMP
Sbjct: 140 ------AAFIIAVGAFWINFYASYGAVEGVSEDLLDVGRTLGVRGDLDMVRSIVLPASMP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G+   +   +   W  VVASE+  V       PG+G  I  A     +  ++  +L +  
Sbjct: 194 GITTGIRTGLGRCWMLVVASEIFGV-------PGVGREILRASNNLLVDKVIAYILVLSL 246

Query: 251 VIFLYD---QLLFRPMIVW 266
           +  L D   + + R ++VW
Sbjct: 247 MFLLVDVAFRAVQRRVLVW 265



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 78/256 (30%), Gaps = 15/256 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           ++  +L           + W  +    A  +    +              +      ++ 
Sbjct: 21  DDPRRLLRGLAGVVGFVVVWHLISLTQAAYVLPSPVAVGDAFAEEFASGTMTTALWSSIR 80

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   ++ + + +  G+   +   +     P  + L   P        ++     H   
Sbjct: 81  HWIPGTVVGTGLGVAAGVAFSWSGLLDDVTAPLVRTLRPVPPLALIGFAIAWFGINHAG- 139

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYV 507
               + ++  G  W   +           D  +V  +  + G     R I+LP   P   
Sbjct: 140 ---AAFIIAVGAFWINFYASYGAVEGVSEDLLDVGRTLGVRGDLDMVRSIVLPASMPGIT 196

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG  T  G  W   + SE+           G+G  I  ++      +V+  +L++    L
Sbjct: 197 TGIRTGLGRCWMLVVASEIFG-------VPGVGREILRASNNLLVDKVIAYILVLSLMFL 249

Query: 568 ALN---RFLWHPLYLY 580
            ++   R +   + ++
Sbjct: 250 LVDVAFRAVQRRVLVW 265


>gi|258542487|ref|YP_003187920.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633565|dbj|BAH99540.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636624|dbj|BAI02593.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639677|dbj|BAI05639.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642733|dbj|BAI08688.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645788|dbj|BAI11736.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648841|dbj|BAI14782.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256654885|dbj|BAI20812.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 320

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S+I +P+G+  G  P ++  I+P        PA  F  L V+ +  Y 
Sbjct: 128 SIRIIFWGFVISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +    G R    +++PGI P 
Sbjct: 188 APK----IAIIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPD 243

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   + ++   
Sbjct: 244 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYQHFDNVYAAMALIGIV 297

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 298 GLGTDMVL 305



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           HS+ Q    +   +    VIS L       L      +  ++ P +D  + +P   F   
Sbjct: 119 HSITQAFGHSIRIIFWGFVISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGAL 178

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V         K        I  I    ++     +  +   +   L E +R+    G +
Sbjct: 179 AVAILGIYDAPK--------IAIIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLR 230

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P  +P L  +  + +   W +++ +E+I          GI  +I    + Q  
Sbjct: 231 LLFRVVIPGILPDLYRDQRILLGWAWTYLIVAELIGTSS------GITWFITQQARYQHF 284

Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             +  AM  +  V    D    LL R    W
Sbjct: 285 DNVYAAMALIGIVGLGTDMVLGLLARKFFTW 315


>gi|188583461|ref|YP_001926906.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346959|gb|ACB82371.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 250

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 17/231 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   + P+    +    +  +    L        +        +  
Sbjct: 35  LPPPSSIPAAFAREVSGGAWPRAVVESLSHYVVGLGAGALAGIALGLASGMFGWFESLTA 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ +++ IP L ++ F +++F             AA+F I     W + F+   ++  +
Sbjct: 95  WVVRLLRPIPGLAWVPFAIIWFGV--------QPSAAVFIIAIGVFWIVFFATQGAVRGV 146

Query: 162 PRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
            RDL EV+++F       +   + +P + PG++  +  ++   W  VVA+E+  V     
Sbjct: 147 DRDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV----- 201

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             PGIG+ +  A        ++  MLTM  +  L+D   F  +  W  ++R
Sbjct: 202 --PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFDT-GFVALQGWLLRWR 249



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   VV +   ++  I +G+  G      S      +LL   P   + P  +       
Sbjct: 61  SLSHYVVGLGAGALAGIALGLASGMFGWFESLTAWVVRLLRPIPGLAWVPFAIIWFGVQP 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504
                    ++  G  W + F           D  EVA +F   G       I+LP   P
Sbjct: 121 S----AAVFIIAIGVFWIVFFATQGAVRGVDRDLIEVAQAFGFRGPLARLTKILLPAATP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  TA G AW A + +E+           G+GA + +++   S   VV+ +L M  
Sbjct: 177 GILVGLRTALGQAWMAVVAAEIFG-------VPGIGARMMQASSLLSTDIVVVYMLTMAA 229

Query: 565 FVLALN 570
                +
Sbjct: 230 LYGLFD 235


>gi|300768942|ref|ZP_07078833.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300493463|gb|EFK28640.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 337

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G     +    P+ +++   PA  + PL +      ++        L+ F   + + F 
Sbjct: 167 MGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFM 222

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G      ++ E A +   + W+  R I+LPG  P   TG  TA G ++   ++SE+ 
Sbjct: 223 TIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMI 282

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                     GLG +I  +   G++ +V   ++IM   
Sbjct: 283 G------AKVGLGWFINWAKGTGNYTQVYAAIVIMAIL 314



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  ++V  ++      +++         +  +  +   L      +    L + VI  +
Sbjct: 99  LVGLLIVQDLLTEKFAVLEQPFFVSFAQILDQMRENAGLLWASTLSSLALWLISFVIGTI 158

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +      + R       P L ++  IP   ++  T+V F          + +A +F 
Sbjct: 159 LGILLGLGMGRYREFNYWAFPYLKVIGIIPAAAWMPLTMVIF--------PTSYMAEVFL 210

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + + F     +  I ++  E +++   S WQ    + +P ++P +   +  +M 
Sbjct: 211 IAFSVWFPVAFMTIGGVQGISKEYFESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMG 270

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             +  +V SEMI          G+G +I  A    +   +  A++ M  +  + 
Sbjct: 271 LSFTMLVISEMIGAKV------GLGWFINWAKGTGNYTQVYAAIVIMAILFSVL 318


>gi|329113703|ref|ZP_08242478.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696966|gb|EGE48632.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 320

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S+I +P+G+  G  P ++  I+P        PA  F  L V+ +  Y 
Sbjct: 128 SIRIIFWGFVISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD 187

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +    G R    +++PGI P 
Sbjct: 188 APK----IAIIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPD 243

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  +I +      F  V   + ++   
Sbjct: 244 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYQHFDNVYAAMALIGIV 297

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 298 GLGTDMVL 305



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           HS+ Q    +   +    VIS L       L      +  ++ P +D  + +P   F   
Sbjct: 119 HSITQAFGHSIRIIFWGFVISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGAL 178

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V         K        I  I    ++     +  +   +   L E +R+    G +
Sbjct: 179 AVAILGIYDAPK--------IAIIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLR 230

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P  +P L  +  + +   W +++ +E+I          GI  +I    + Q  
Sbjct: 231 LLFRVVIPGILPDLYRDQRILLGWAWTYLIVAELIGTSS------GITWFITQQARYQHF 284

Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             +  AM  +  V    D    LL R    W
Sbjct: 285 DNVYAAMALIGIVGLGTDMVLGLLARKFFTW 315


>gi|251782304|ref|YP_002996606.1| glycine betaine transport system permease [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390933|dbj|BAH81392.1| glycine betaine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 508

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 79  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 192 IIFNSLL 198



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 27  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 195

Query: 571 RFL 573
             L
Sbjct: 196 SLL 198


>gi|329723321|gb|EGG59851.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus epidermidis
           VCU144]
          Length = 504

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A+ I+ L     A L  K+++L  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLFSTIIEHIQLSFIALFIATLIAVPIAILLTKTKKLSEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            L AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------RLPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   IL   +    +  ++D  + R M   S K
Sbjct: 173 DRNNSALILIGAIPAALLAIIFD-FILRYMERLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA++I +P+ I +     +S  +   A +L   P+     L++       L   +
Sbjct: 27  FIALFIATLIAVPIAILLTKTKKLSEIVMNIAAVLQTIPSLALLGLMIPIFGIGRLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPLRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNSALILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
            F+   +     + L
Sbjct: 196 -FILRYMERLSYKKL 209


>gi|315505552|ref|YP_004084439.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|315412171|gb|ADU10288.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 278

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 15/170 (8%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  Q+    P     PL++  V             L+  G  + I FN  AG   
Sbjct: 113 DDLVDPPVQMARMLPHLGLVPLLIIWVGIG----ESLKVTLVALGAFFPIYFNTYAGIRD 168

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E A +  +      R+++LPG  P    G   A G AW + +V E  +      
Sbjct: 169 IDERLVEAARTCGLGAAARLRHVVLPGALPALFLGLRLAIGAAWLSLVVGEQVN------ 222

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             TG+G  + E+ E      VVLG+LI     LA +  +      Y  R 
Sbjct: 223 AQTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASDLLI-----RYAERR 267



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L   ++   P  ++          +L  +   +  R    ++I      V    A   R 
Sbjct: 52  LLAPEKLPAPSAVLATGWRLASDGTLGVHLLDSLTRAALGLLIGGGLALVLGAAAGLLRL 111

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              ++ P + + + +P LG +   +++       KV    L A F I+        F+ Y
Sbjct: 112 GDDLVDPPVQMARMLPHLGLVPLLIIWVGIGESLKVTLVALGAFFPIY--------FNTY 163

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + +I   L E +R+  L    +  ++ +P ++P L   + +++   W  +V      V
Sbjct: 164 AGIRDIDERLVEAARTCGLGAAARLRHVVLPGALPALFLGLRLAIGAAWLSLV------V 217

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           G+ V    G+G  +  A +      ++  +L    +    D L+    R  + W
Sbjct: 218 GEQVNAQTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASDLLIRYAERRTLAW 271


>gi|194289882|ref|YP_002005789.1| alkanesulfonate transporter; ABC superfamily, membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223717|emb|CAQ69724.1| alkanesulfonate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 267

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 12/254 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDV 376
            L       P+   +  +   V  +L + W        +   +    +  +   +     
Sbjct: 4   PLLPPPRQAPQALWRAAAPWIVPVLLIVAWQLASQNGWLSSRVLPAPLAVVQAAWELARS 63

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     ++ +R ++   I   + + +G+  G     ++ +    Q++   PA    PL
Sbjct: 64  GELWRHVGVSTWRALLGFAIGGGLGLLLGLLTGTFRTAATLLDSTLQMVRNIPALALIPL 123

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+  G  + +  N   G  +      E+A S+ ++GW+ +R 
Sbjct: 124 VILWFGI----DESAKLFLVSLGVFFPVYLNTYHGIRSVDAGLVEMARSYGLSGWQLYRE 179

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILPG  P  + G   A G  W   IV+E  S        +G+G     + E      V+
Sbjct: 180 VILPGALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYMTMNAREFLQTDVVL 233

Query: 557 LGVLIMCCFVLALN 570
           +G+L+        +
Sbjct: 234 VGILLYALLGKLAD 247



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 18/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R        +  ++   + +       +    P  +V           L ++   +T R 
Sbjct: 18  RAAAPWIVPVLLIVAWQLASQNGWLSSRVLPAPLAVVQAAWELARSGELWRHVGVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      +   L    R    +L   L ++++IP L  +   +++F         
Sbjct: 78  LLGFAIGGGLGLLLGLLTGTFRTAATLLDSTLQMVRNIPALALIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + Y  + ++   L E++RS+ LSGWQ +  + +P ++PG+
Sbjct: 132 --ESAKLFLVSLGVFFPVYLNTYHGIRSVDAGLVEMARSYGLSGWQLYREVILPGALPGI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +      +L  +L    + 
Sbjct: 190 LVGVRFALGLMWVVLIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLG 243

Query: 253 FLYDQL---LFRPMIVWSNKF 270
            L D L   L R  + W   +
Sbjct: 244 KLADWLSRGLERYWLRWHPGY 264


>gi|172056534|ref|YP_001812994.1| substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sibiricum 255-15]
 gi|171989055|gb|ACB59977.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sibiricum 255-15]
          Length = 527

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 73/179 (40%), Gaps = 15/179 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L  + +R    ++ +  ++Q++P L  L F + +         IG+  A I  +
Sbjct: 37  GIPIGILITRYQRFAKPILALTSVVQAVPSLALLGFLIPFIG-------IGSTPAIIMVV 89

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S +  +  + Y  L +IP D+ E ++   L+  Q    + +P ++P ++  + +S   
Sbjct: 90  LYSLL-PIVKNTYTGLSSIPGDMLEAAKGIGLTDRQILGKVQIPLALPIMMAGIRIS--- 145

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               V A  ++ +    I   G+G  +   I+  D   IL   +    +    D ++ R
Sbjct: 146 ---AVTAVGLMTI-SAFIGAGGLGYLVFSGIQTVDNNQILAGAIPAGILALAIDFIVSR 200



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 11/181 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI I      +  I     ++ A P+      ++  +       +    ++++  +
Sbjct: 37  GIPIGILITRYQRFAKPILALTSVVQAVPSLALLGFLIPFIGIG----STPAIIMVVLYS 92

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N   G S+ P D  E A    +T  +    + +P   P  + G   +   A   
Sbjct: 93  LLPIVKNTYTGLSSIPGDMLEAAKGIGLTDRQILGKVQIPLALPIMMAGIRISAVTAVGL 152

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
             +S     G       GLG  +    +     +++ G +      LA++  +    Y  
Sbjct: 153 MTISAFIGAG-------GLGYLVFSGIQTVDNNQILAGAIPAGILALAIDFIVSRIEYSV 205

Query: 581 G 581
            
Sbjct: 206 A 206


>gi|146276801|ref|YP_001166960.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555042|gb|ABP69655.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 266

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 12/255 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCV---VCGVAIGIAWQSIGYIVNHFTYQDVL 377
              R  +P           VS+ + +  +     +  V        I  +    T     
Sbjct: 7   PRARPQWPAGLRGRDHRPLVSFGIILLIWTAAHELGWVDPRFLPSPIDLLWRLVTEIGSG 66

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T+ R +    I + + + +G  +G    ++  I P            + PL+
Sbjct: 67  SILLDLAETLKRNLGGFAIGAGVGVALGALLGTSRLLARIIGPTVVAHRQTALFAWVPLI 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                             +        + N   G +  P   +E+A++   +  ++ R++
Sbjct: 127 AMWFGGGDQGK----IAFVAMAAFQPTVINTWRGIAGVPGGLQELAAALRFSRLQYLRHV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P   TG   A   AW A++ SE+         T GLG  + E ++      + L
Sbjct: 183 ALPAALPQIFTGLHAALIYAWLATVGSELFLN-----ITPGLGGRLIEGSQLFEMDLLFL 237

Query: 558 GVLIMCCFVLALNRF 572
            ++I     L  N  
Sbjct: 238 VIVIFGLVGLVYNGL 252



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 96/263 (36%), Gaps = 17/263 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P  +  R    +      +L+    + L     +    P D++  +   +   S+    +
Sbjct: 14  PAGLRGRDHRPLVSFGIILLIWTAAHELGWVDPRFLPSPIDLLWRLVTEIGSGSILLDLA 73

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T  R L    I          L   SR L  ++ P +   +   +  ++    ++F   
Sbjct: 74  ETLKRNLGGFAIGAGVGVALGALLGTSRLLARIIGPTVVAHRQTALFAWVPLIAMWFGGG 133

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GK+    +AA              + ++ +  +P  L+E++ + R S  Q   ++ +P
Sbjct: 134 DQGKIAFVAMAAF--------QPTVINTWRGIAGVPGGLQELAAALRFSRLQYLRHVALP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +   +  ++   W   V SE+      +   PG+G  +    +  ++  +   ++
Sbjct: 186 AALPQIFTGLHAALIYAWLATVGSELF-----LNITPGLGGRLIEGSQLFEMDLLFLVIV 240

Query: 247 TMLGVIFLYDQLLFR---PMIVW 266
               V  +Y+ L  R    ++ W
Sbjct: 241 IFGLVGLVYNGLAERMEARLLKW 263


>gi|206559111|ref|YP_002229871.1| permease of taurine ABC transporter [Burkholderia cenocepacia
           J2315]
 gi|198035148|emb|CAR51022.1| permease component of taurine ABC transporter [Burkholderia
           cenocepacia J2315]
          Length = 296

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 105 SAARVFGAFALATAIGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 162

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       +     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 163 --DETAKLVVIFLACFAPVAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 220

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+L++   
Sbjct: 221 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILLIGAI 274

Query: 566 VLALNRFLWHPLYLYGTRC 584
               +  +      +  R 
Sbjct: 275 AWLFDLAM-----RWVERR 288



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+  A  ++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 98  LSDHLLWSAARVFGAFALATAIGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVV 157

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 158 IWFGID--------ETAKLVVIFLACFAPVAMAARAGVRAATVEQINAAYSLGGSFAQIV 209

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 210 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 263

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 264 VVMGILLIGAIAWLFDLAMRWVERRVVPWKGR 295


>gi|191639381|ref|YP_001988547.1| ABC-type transporter membrane permease component [Lactobacillus
           casei BL23]
 gi|190713683|emb|CAQ67689.1| ABC-type transporter membrane permease component [Lactobacillus
           casei BL23]
 gi|327383471|gb|AEA54947.1| SsuD [Lactobacillus casei LC2W]
 gi|327386662|gb|AEA58136.1| SsuD [Lactobacillus casei BD-II]
          Length = 271

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 17/252 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
                  +  +  +V   +           A+   W +   +    T       +W    
Sbjct: 10  RPKPRTKRHINWFKVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGE 69

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 I+++R      I   I   +G+  G    I + +    Q+L   P       ++
Sbjct: 70  LPKNIAISLYRATAGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPHLS----LI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  + I  N   G +    +  E+  ++ ++    +  II
Sbjct: 126 PLLIILIGIGESAKISLVAIGVMFPIYINTYQGITTADPELLEMGHAYGLSKRDLFTRII 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            PG  P  + G   A G  W   IV+E  S       ++GLG     + E      V+L 
Sbjct: 186 FPGALPNILMGVRYALGVMWTTLIVAETIS------SSSGLGYMATNAQEFMRMDTVLLC 239

Query: 559 VLIMCCFVLALN 570
           +LI        +
Sbjct: 240 ILIYALLGKLSD 251



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 90/258 (34%), Gaps = 17/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P I  L         ++           P  ++           LP+  + +  R  
Sbjct: 23  KVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGELPKNIAISLYRAT 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   I     FV   +    R +  +L   + ++++IP         +  + L    +  
Sbjct: 83  AGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPH--------LSLIPLLIILIGI 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A I  +    ++ +  + YQ +     +L E+  ++ LS    F  +  P ++P ++
Sbjct: 135 GESAKISLVAIGVMFPIYINTYQGITTADPELLEMGHAYGLSKRDLFTRIIFPGALPNIL 194

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  +L  +L    +  
Sbjct: 195 MGVRYALGVMWTTLIVAETISSSS------GLGYMATNAQEFMRMDTVLLCILIYALLGK 248

Query: 254 LYDQL---LFRPMIVWSN 268
           L D +   L +  + W  
Sbjct: 249 LSDLIAKSLEKVFLRWRQ 266


>gi|27380914|ref|NP_772443.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354080|dbj|BAC51068.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 282

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 12/255 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--FTYQDVLY 378
           G          L +        +    W  V    A+ +       +V      +     
Sbjct: 27  GRRPDSARLRRLNILIGALSLPLFVGLWELVSRSGAVNMVLFPPPTVVATAVLEWIRSGQ 86

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +     ++FRV    I+   + I +GI  G  P ISS + P   +L   P   F P+V+
Sbjct: 87  FLGDLLASLFRVTTGFIVGGALGILLGILTGQFPVISSLLSPLFHILRPIPPIAFVPIVI 146

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                           L+++G  + +  +   G           A        +  + I+
Sbjct: 147 LWFGLSEAGK----LFLVVWGVFFTVWLSTHIGVQKVDRGLIRAALMLGTPRRQMLQEIV 202

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           L G  PY V G  TA   ++   + +E+A          G+   I  + +     +V+ G
Sbjct: 203 LLGALPYIVVGLRTAVSISFYTLVAAELAG------TFAGIVYRIEIAQQNLQTGQVMGG 256

Query: 559 VLIMCCFVLALNRFL 573
           +  +       +R  
Sbjct: 257 LAALGLISFIADRLF 271



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 90/258 (34%), Gaps = 18/258 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINIL----LHGIQETTVPRDIVDIVPITLDVHSL 61
             P     R    +   L+  L +G+  ++       +     P  +   V   +     
Sbjct: 28  RRPDSARLRRLNILIGALSLPLFVGLWELVSRSGAVNMVLFPPPTVVATAVLEWIRSGQF 87

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R+ +  ++      +   L  +   +  +L P+  I++ IP + F+   ++
Sbjct: 88  LGDLLASLFRVTTGFIVGGALGILLGILTGQFPVISSLLSPLFHILRPIPPIAFVPIVIL 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     GK+        F +          S +  +  + R L   +        Q   
Sbjct: 148 WFGLSEAGKLFLVVWGVFFTV--------WLSTHIGVQKVDRGLIRAALMLGTPRRQMLQ 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +  ++P +V  +  ++S  ++ +VA+E+           GI   I +A +      +
Sbjct: 200 EIVLLGALPYIVVGLRTAVSISFYTLVAAELAG------TFAGIVYRIEIAQQNLQTGQV 253

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  +  +  + F+ D+L 
Sbjct: 254 MGGLAALGLISFIADRLF 271


>gi|218548450|ref|YP_002382241.1| alkanesulfonate transporter permease subunit [Escherichia
           fergusonii ATCC 35469]
 gi|218355991|emb|CAQ88607.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 263

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  ++           L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALDLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 86/260 (33%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S   + +         T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVMTAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A    W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALDLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPAYHLKE 260


>gi|125624494|ref|YP_001032977.1| choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493302|emb|CAL98272.1| choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071285|gb|ADJ60685.1| choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 500

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 25/205 (12%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD---IMQSIPILG 114
             +L ++   + + +  A++IS+    +        RR   +  PIL    I Q+IP L 
Sbjct: 16  WQALLEHIQISLISIFIAILISIPLALLL-------RRFPKIAEPILQVTGIFQTIPSLA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   + +             L AI A+    ++ +  + Y  L  I   L E + +F +
Sbjct: 69  LLGLLIPFIGIG--------SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGM 120

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  ++     +  +MP ++  +  S          + +I  G       G+G++I L I 
Sbjct: 121 NRRERLMKFELSLAMPFIMAGIRTSTVMVIGTATLAALIGAG-------GLGNFILLGIN 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  IL   ++   +  ++  LL
Sbjct: 174 MNDVSLILIGAISSALLAIIFSSLL 198



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 12/203 (5%)

Query: 372 TYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           T+Q+     W   +   ++ ++ I IA +I IP+ + +   P I+  I     +    P+
Sbjct: 7   TFQNQQGQFWQALLEHIQISLISIFIAILISIPLALLLRRFPKIAEPILQVTGIFQTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L++  +       +L   + ++    + I+ N   G         E A++F +  
Sbjct: 67  LALLGLLIPFIGIG----SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNR 122

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                   L    P+ + G  T+       + ++ +   G       GLG +I       
Sbjct: 123 RERLMKFELSLAMPFIMAGIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMN 175

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               +++G +      +  +  L
Sbjct: 176 DVSLILIGAISSALLAIIFSSLL 198


>gi|330443771|ref|YP_004376757.1| ABC transporter permease [Chlamydophila pecorum E58]
 gi|328806881|gb|AEB41054.1| ABC transporter permease [Chlamydophila pecorum E58]
          Length = 591

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 90/239 (37%), Gaps = 20/239 (8%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVP---ITLDVHSLPQYAS---RTTLRMLSAMVISLL 81
           +I +   +L    +       +   P   I    HSLP   S   +T   +L    ++L 
Sbjct: 10  IIILSFFILWEAAQYRPSLAFLCPPPSKIIKASAHSLPLLLSCSYQTLKGILGGFFLALA 69

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            + + A++    +    +L P+  ++Q  P+       V++F             A I  
Sbjct: 70  LSIMLASIMLTYKSAKDLLQPLFVLLQCTPMFTLAPLIVLWFGWGL--------NAVIIP 121

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +  + +T ++YQ +   PR+L E       +  Q    L +P+++P +   + +++ 
Sbjct: 122 TALTIFFPLTLTIYQGITATPRELLEQFILHGATKKQILIKLRLPYALPHISSGLKIAIG 181

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              F  +A E +          G+G  I  + +  ++  +   +  +  +     Q++ 
Sbjct: 182 SAGFAAIAGEWVA------SHSGLGILILESRRNYEMELMFAGLFVLSLLTLSLFQIVL 234



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  ++    +A  + I +   +         +QP   LL   P     PL+V    +  
Sbjct: 56  TLKGILGGFFLALALSIMLASIMLTYKSAKDLLQPLFVLLQCTPMFTLAPLIVLWFGWGL 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +  +L + F     +   +  G +A P +  E       T  +    + LP   P+
Sbjct: 116 NAVIIPTALTIFF----PLTLTIYQGITATPRELLEQFILHGATKKQILIKLRLPYALPH 171

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   A G A  A+I  E  +        +GLG  I ES        +  G+ ++   
Sbjct: 172 ISSGLKIAIGSAGFAAIAGEWVASH------SGLGILILESRRNYEMELMFAGLFVLSLL 225

Query: 566 VLAL 569
            L+L
Sbjct: 226 TLSL 229


>gi|312889854|ref|ZP_07749399.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Mucilaginibacter paludis DSM 18603]
 gi|311297653|gb|EFQ74777.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Mucilaginibacter paludis DSM 18603]
          Length = 523

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                    +++ I++L         A+ ++    ++    +MQ+IP +  L F +    
Sbjct: 23  TLTHIGLTFTSLFIAILIGLPLGIFIARKKQFSGAVLGFAGVMQTIPSIALLGFLIPILG 82

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        AIFA+F   +  +  + Y  +  +   ++E ++   +S  Q    + 
Sbjct: 83  IG--------AKPAIFALFLYALLPIIRNTYTGITQVDATIKEAAKGMGMSYSQILLKVE 134

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  +        V +  +    ++I   G+G +I   I   +   IL  
Sbjct: 135 LPLAMPVILAGIRTA-------TVINVGVATLASLIAAGGLGEFIFGGISLNNTNMILAG 187

Query: 245 MLTMLGVIFLYDQLLFR 261
            +    +  ++D LL R
Sbjct: 188 AIPSALLAIVFDFLLSR 204



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 12/196 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + IA +I +P+GI+I  +   S  +  FA ++   P+      ++  +         
Sbjct: 31  FTSLFIAILIGLPLGIFIARKKQFSGAVLGFAGVMQTIPSIALLGFLIPILGIGAK---- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                +       I+ N   G +      KE A    ++  +    + LP   P  + G 
Sbjct: 87  PAIFALFLYALLPIIRNTYTGITQVDATIKEAAKGMGMSYSQILLKVELPLAMPVILAGI 146

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ + + G       GLG +I       +   ++ G +      +  +
Sbjct: 147 RTATVINVGVATLASLIAAG-------GLGEFIFGGISLNNTNMILAGAIPSALLAIVFD 199

Query: 571 RFLWHPLYLYGTRCLR 586
            FL   +     + +R
Sbjct: 200 -FLLSRIQNINFKKMR 214


>gi|115391880|dbj|BAF33367.1| putative transporter protein [Streptomyces sp. NL15-2K]
          Length = 257

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + + IAS   I VG+ I   PH+        + L   P+    PL V       
Sbjct: 60  TLTGWALGLAIASCAGIVVGVLISVVPHLREATASTIEFLRPIPSVALIPLAVLLYGSEL 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    + LL+++ + W +L  V+ G        +E A S+ +  W   R+++ P   PY
Sbjct: 120 RS----VLLLVVYASFWQVLIQVLYGVQDVDPVAEETARSYGLGTWARIRHVLWPTALPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   A   +I +E+       +   GLG  I  +    + PE+   +++    
Sbjct: 176 VMTGVRLAAAVALILAITAELI------IGAPGLGKRIGVAQTSQAVPEMYALIVVTGVL 229

Query: 566 VLALN 570
            L +N
Sbjct: 230 GLLIN 234



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 84/229 (36%), Gaps = 17/229 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           I D +   +   +       T       + I+     V   L +    L       ++ +
Sbjct: 40  IADALLDEVADSAFWTALGDTLTGWALGLAIASCAGIVVGVLISVVPHLREATASTIEFL 99

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP +  +   V+ + +           + +  +  +  W +   +   + ++    EE
Sbjct: 100 RPIPSVALIPLAVLLYGSELR--------SVLLLVVYASFWQVLIQVLYGVQDVDPVAEE 151

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +RS+ L  W +  ++  P ++P ++  + ++ +      + +E+I      I  PG+G 
Sbjct: 152 TARSYGLGTWARIRHVLWPTALPYVMTGVRLAAAVALILAITAELI------IGAPGLGK 205

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
            I +A   Q +  +   ++    +  L +   + + R  + W    R E
Sbjct: 206 RIGVAQTSQAVPEMYALIVVTGVLGLLINVGARTVERRALAWHQSVRGE 254


>gi|313650823|gb|EFS15224.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri 2a str. 2457T]
          Length = 217

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 74/208 (35%), Gaps = 19/208 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+ +R ++   I   + + +G+  G        +    Q+L   P     PLV+   + 
Sbjct: 17  AISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFAI 76

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  GT + I  N   G         E+A S+ ++G   + ++ILP   
Sbjct: 77  ----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDAL 132

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   IV+E  S        +G+G     + E      VV+ +++  
Sbjct: 133 PSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 186

Query: 564 CFV-------LALNRFL--WHPLYLYGT 582
                       L R    W+P Y    
Sbjct: 187 LLGKLADVSAQLLERLWLRWNPAYHLKE 214



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 17/217 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+ + ++ R L    I      +   ++  SR    +L   + +++++P L  +   +++
Sbjct: 14  QHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 73

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E A IF +    ++ +  + +  + NI R L E++RS+ LSG   F +
Sbjct: 74  FAID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIH 125

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  ++   W  ++ +E I          GIG     A +      ++
Sbjct: 126 VILPDALPSIMVGVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVV 179

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
            A++    +  L D   QLL R  + W+  + L+  T
Sbjct: 180 VAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEAT 216


>gi|302868051|ref|YP_003836688.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|302570910|gb|ADL47112.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
          Length = 278

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 15/170 (8%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  Q+    P     PL++  V             L+  G  + I FN  AG   
Sbjct: 113 DDLVDPPVQMARMLPHLGLVPLLIIWVGIG----ESLKVTLVALGAFFPIYFNTYAGIRD 168

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E A +  +      R+++LPG  P    G   A G AW + +V E  +      
Sbjct: 169 IDERLVEAARTCGLGAVARLRHVVLPGALPALFLGLRLAIGAAWLSLVVGEQVN------ 222

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             TG+G  + E+ E      VVLG+LI     LA +  +      Y  R 
Sbjct: 223 AQTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASDLLI-----RYAERR 267



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L   ++   P  ++          +L  +   +  R    ++I      V    A   R 
Sbjct: 52  LLAPEKLPAPSAVLATGWRLASDGTLGVHLLDSLTRAALGLLIGGGLALVLGAAAGLLRL 111

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              ++ P + + + +P LG +   +++       KV    L A F I+        F+ Y
Sbjct: 112 GDDLVDPPVQMARMLPHLGLVPLLIIWVGIGESLKVTLVALGAFFPIY--------FNTY 163

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + +I   L E +R+  L    +  ++ +P ++P L   + +++   W  +V      V
Sbjct: 164 AGIRDIDERLVEAARTCGLGAVARLRHVVLPGALPALFLGLRLAIGAAWLSLV------V 217

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           G+ V    G+G  +  A +      ++  +L    +    D L+    R  + W
Sbjct: 218 GEQVNAQTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASDLLIRYAERRTLAW 271


>gi|115361274|ref|YP_778411.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115286602|gb|ABI92077.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 295

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 97/244 (39%), Gaps = 12/244 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAM 76
              ++AFVL+     +      +  VP            +    L      +   +L   
Sbjct: 47  RRVVVAFVLIAAWEIVARIVANDLLVPTVGATQAAFVQGIASGELLVKTGVSMSVLLRGY 106

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F             
Sbjct: 107 ALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWFGLGTG-------- 158

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P ++  +
Sbjct: 159 SLLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPSILSGL 218

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +  +  W  ++A+E++          G+G YI     E     +   +  ++ +  L +
Sbjct: 219 RVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVE 276

Query: 257 QLLF 260
            L+F
Sbjct: 277 HLVF 280



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 82/246 (33%), Gaps = 7/246 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIAS 398
           V+++L   W  V   VA  +   ++G     F        ++    ++M  ++    +  
Sbjct: 51  VAFVLIAAWEIVARIVANDLLVPTVGATQAAFVQGIASGELLVKTGVSMSVLLRGYALGV 110

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +    +             +     +    P+    P+ +        +    L  +++ 
Sbjct: 111 VFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWFGLGTGS----LLFVLVH 166

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W +  ++  G +  P   K    ++ +TG R    I++P   P  ++G       AW
Sbjct: 167 AVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPSILSGLRVGWAFAW 226

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
              I +E+           GLG YI ++  +     V  G+  +    L +   ++  L 
Sbjct: 227 RTLIAAELVFGA--SAGQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVFDTLE 284

Query: 579 LYGTRC 584
               R 
Sbjct: 285 RVTVRR 290


>gi|313674288|ref|YP_004052284.1| substrate-binding region of ABC-type glycine betaine transport
           system [Marivirga tractuosa DSM 4126]
 gi|312940986|gb|ADR20176.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Marivirga tractuosa DSM 4126]
          Length = 525

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                   L ++ I++L       L A  ++    ++  ++ +Q+IP L  L F + +F 
Sbjct: 19  LLEHIELTLVSLCIAVLLGITIGILIAIYQKSTKTVLSFVNTIQTIPSLALLGFLLPFFG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      + AI A+F   +  +  + Y  +  +   + E + +  +   Q  + + 
Sbjct: 79  IGV--------VPAIIALFLYALLPIVRNTYTGIIEVDAAVRESAIAMGMKRSQVLFKVE 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  +        V +  +      I   G+G +I   I+  +   IL  
Sbjct: 131 LPLALPYIMAGIRTA-------SVINVGVATLSAFIAAGGLGKFILQGIQLNNTNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFR 261
            +    +   +D +L R
Sbjct: 184 AIPASLLALFFDAILGR 200



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 11/206 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F  ++   V       +   +V + IA ++ I +GI I      +  +  F   +   P
Sbjct: 6   DFLVKNKAEVFKQLLEHIELTLVSLCIAVLLGITIGILIAIYQKSTKTVLSFVNTIQTIP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +      ++           +   + +       I+ N   G        +E A +  + 
Sbjct: 66  SLALLGFLLPFFGIG----VVPAIIALFLYALLPIVRNTYTGIIEVDAAVRESAIAMGMK 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + LP   PY + G  TA       + +S   + G       GLG +I +  + 
Sbjct: 122 RSQVLFKVELPLALPYIMAGIRTASVINVGVATLSAFIAAG-------GLGKFILQGIQL 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            +   ++ G +      L  +  L  
Sbjct: 175 NNTNMILAGAIPASLLALFFDAILGR 200


>gi|114326749|ref|YP_743906.1| glycine betaine/L-proline transport system permease proW
           [Granulibacter bethesdensis CGDNIH1]
 gi|114314923|gb|ABI60983.1| glycine betaine/L-proline transport system permease protein proW
           [Granulibacter bethesdensis CGDNIH1]
          Length = 283

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 16/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+I ++ +L + ++ +           + +          +T   +LS+ ++S L    
Sbjct: 58  PLMIVLLAVLAYVMRRSVSIAVFTAAALLFILNQGYWDETMQTLALVLSSALVSTLIGVP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA    L   + P+LD+MQ++P   +L  T+V F     G V G     IFA+   
Sbjct: 118 LGIAAAHRPWLAQGMRPVLDLMQTLPTFVYLIPTLVLFGL---GAVPGLISTVIFALPAP 174

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + ++PR L E   +F  + WQ  W + +P +   ++  +   +     
Sbjct: 175 -----IRLTQLGISSVPRPLIEAGEAFGATRWQLLWKVELPGAKTMILAGLTQCIMLSLS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++  G       G+G  +  A+    +     A L ++ +  + D+ +FRP
Sbjct: 230 MVVIAALVGAG-------GLGVPVVRALNTVRVDTGFEAGLAIVLLAIMLDR-VFRP 278



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 97/282 (34%), Gaps = 25/282 (8%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              +  + + S   F  +S  V  +      +    P   + +        +L +  + +
Sbjct: 20  ARLIDLLKHHSQGLFDAISVAVSAVINGFSSLLLSVPGPLMIV--------LLAVLAYVM 71

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
              V+I +   +    + +  Y D          T+  V+   +++++I +P+GI    R
Sbjct: 72  RRSVSIAVFTAAALLFILNQGYWD------ETMQTLALVLSSALVSTLIGVPLGIAAAHR 125

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P ++  ++P   L+   P  V+    +  +  + L     L   +IF     I      G
Sbjct: 126 PWLAQGMRPVLDLMQTLPTFVYL---IPTLVLFGLGAVPGLISTVIFALPAPIRL-TQLG 181

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S+ P    E   +F  T W+    + LPG     + G       + +  +++ +   G 
Sbjct: 182 ISSVPRPLIEAGEAFGATRWQLLWKVELPGAKTMILAGLTQCIMLSLSMVVIAALVGAG- 240

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLG  +  +             L +    + L+R  
Sbjct: 241 ------GLGVPVVRALNTVRVDTGFEAGLAIVLLAIMLDRVF 276


>gi|33862827|ref|NP_894387.1| glycine betaine/proline ABC transporter [Prochlorococcus marinus
           str. MIT 9313]
 gi|33634743|emb|CAE20729.1| ABC transporter,membrane component, glycine betaine/proline family
           [Prochlorococcus marinus str. MIT 9313]
          Length = 304

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +++A +++L+        +A+ + +  +  P+LD+MQ++P   +L   
Sbjct: 93  GLWPPMISTLALVIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPA 152

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F            + +  A     +  +    Y  +  +P DL E  R+F  S  Q 
Sbjct: 153 VMFFGTGL--------VPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQL 204

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P L+  +  ++      VV + MI  G            +   I++ D+ 
Sbjct: 205 LWKVQLPNALPTLMAGVNQTIMLALSMVVIASMIGGGGLGDV-------VLRGIQQLDVG 257

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D+L
Sbjct: 258 LGFEGGLAVVILAVILDRL 276



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 86/279 (30%), Gaps = 14/279 (5%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
           F   S+      +S  V  L      I          L         +   W        
Sbjct: 9   FATVSTGPVGEGMSRFVDWLLNHAQPIFLVIDSAINGLAGAIEQILSVPAPWLLAPLIAI 68

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           +     S  + +      +++  + L      T+  V+   ++A II IP+GI+   R H
Sbjct: 69  LAAWRVSFSFAILSLLGLNLVLFMGLWPPMISTLALVIAASLLALIIGIPIGIFSARRQH 128

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           I +  +P   L+   PA V+    V       +   +   +     +   ++     G  
Sbjct: 129 IWAITRPVLDLMQTMPAFVYLIPAVMFFGTGLVPSTIATLIF----SMPPVVRLTYLGIR 184

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E   +F  +  +    + LP   P  + G       A +  +++ +   G + 
Sbjct: 185 QVPVDLIEAGRAFGCSERQLLWKVQLPNALPTLMAGVNQTIMLALSMVVIASMIGGGGLG 244

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                    +    ++        G L +    + L+R 
Sbjct: 245 DV-------VLRGIQQLDVGLGFEGGLAVVILAVILDRL 276


>gi|300693862|ref|YP_003749835.1| ABC transporter, permease component [Ralstonia solanacearum PSI07]
 gi|299075899|emb|CBJ35208.1| ABC transporter, permease component [Ralstonia solanacearum PSI07]
          Length = 262

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++     ++ R +  + +A ++ + +G+ +G+     + + P  QL     A  
Sbjct: 54  LAHSGALLKHLAASLQRSLWGLFLAIMLGVTLGLLMGWFTRFEAIVDPILQLFRQTSAFA 113

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            FP+ +  +     +       ++ + + W +L + I G           A S   +   
Sbjct: 114 LFPVFILFLGIGESSK----VAIIFWASFWPVLLSTIGGVRQVDKLLVHSARSMGASNLF 169

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +R ++LP   P   TG   A      A + +E+          +GLG     S E    
Sbjct: 170 VFRKVVLPAATPSIFTGIRLAGTYCVTALVAAEMIG------AHSGLGFLTLNSQEVFQI 223

Query: 553 PEV 555
           P +
Sbjct: 224 PTM 226



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            +  +++F+ +  ++  L    +   + P  +VD +       +L ++ + +  R L  +
Sbjct: 16  GLAGIVSFLALWELVPRLGIVSEAYLSPPSQVVDAIWQLAHSGALLKHLAASLQRSLWGL 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++++       L     R   ++ PIL + +           +++            E 
Sbjct: 76  FLAIMLGVTLGLLMGWFTRFEAIVDPILQLFRQTSAFALFPVFILFLGIG--------ES 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +  IF +  W +  S    +  + + L   +RS   S    F  + +P + P +   +
Sbjct: 128 SKVAIIFWASFWPVLLSTIGGVRQVDKLLVHSARSMGASNLFVFRKVVLPAATPSIFTGI 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++ +     +VA+EMI          G+G     + +   +  +   +L +  +  L +
Sbjct: 188 RLAGTYCVTALVAAEMIG------AHSGLGFLTLNSQEVFQIPTMYAGILLLALLGLLLN 241

Query: 257 Q---LLFRPMIVW 266
               L+ R +  W
Sbjct: 242 TILALIERRLTRW 254


>gi|312116260|ref|YP_004013856.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221389|gb|ADP72757.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 340

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 14/249 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR+ P    L  F L+  ++   L  + +   P     +   T D   L +    +    
Sbjct: 91  RRLLPWSLALGIFTLIWQLLAGKLGVLPQPFFPPPHGLLEVFTDDYPKLIEGVLASLRLE 150

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                   +  F        SR  G  + PI+  +  +P + +L      F         
Sbjct: 151 FLGFAFGAIIGFWVGVALGWSRTFGYWVHPIMRFIGPVPSIAWLPIAFFAF--------P 202

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +  A+IF I  +  + +    +  + ++     +V+R+   +     + + +P ++P +
Sbjct: 203 SSFSASIFLIALTTGFPVAVLTWSGVASVNPAYYDVARTLGANERFLIFKVAIPAALPHV 262

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M +   +  +V +EM+ V        G+G Y+  A        +  A++ M  + 
Sbjct: 263 FVGLFMGLGASFAVLVTAEMMGVKA------GLGFYLQWAQGWAAYANMYAALIVMALMC 316

Query: 253 FLYDQLLFR 261
                LLF+
Sbjct: 317 TGLVSLLFK 325



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 81/265 (30%), Gaps = 20/265 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------ 374
             +         Q     +V  +L       +  +   +    +G +   F         
Sbjct: 71  AALIAGVVTGIWQPALGAKVRRLLPWSLALGIFTLIWQLLAGKLGVLPQPFFPPPHGLLE 130

Query: 375 ----DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               D   +I     ++    +     +II   VG+ +G+       + P  + +   P+
Sbjct: 131 VFTDDYPKLIEGVLASLRLEFLGFAFGAIIGFWVGVALGWSRTFGYWVHPIMRFIGPVPS 190

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P+          +       L+   T + +     +G ++    + +VA +     
Sbjct: 191 IAWLPIAFFAFP----SSFSASIFLIALTTGFPVAVLTWSGVASVNPAYYDVARTLGANE 246

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 + +P   P+   G     G ++   + +E+           GLG Y+  +    
Sbjct: 247 RFLIFKVAIPAALPHVFVGLFMGLGASFAVLVTAEMMG------VKAGLGFYLQWAQGWA 300

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWH 575
           ++  +   +++M      L   L+ 
Sbjct: 301 AYANMYAALIVMALMCTGLVSLLFK 325


>gi|187779702|ref|ZP_02996175.1| hypothetical protein CLOSPO_03298 [Clostridium sporogenes ATCC
           15579]
 gi|187773327|gb|EDU37129.1| hypothetical protein CLOSPO_03298 [Clostridium sporogenes ATCC
           15579]
          Length = 527

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A++I+++       +  K++++  +++   ++ Q+IP L  L F +           
Sbjct: 26  TLIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIGSGP-- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 84  ------AITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    +   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGIRIA------SVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 191 ALIIDWITGR 200



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+GI I     I++ +  FA L  A P+      ++  +         
Sbjct: 27  LIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIGSG---- 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFVGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALIID 195


>gi|170747759|ref|YP_001754019.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170654281|gb|ACB23336.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 260

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 19/207 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R +   +I   I   +G+  G             Q++   P     PLV+     
Sbjct: 64  GVSTLRALAGFVIGGGIGFALGLANGLSRLSERLTDTSVQMVRNVPHLSLIPLVILWFGI 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + I  N + G  +      E+   + ++    +  ++LPG  
Sbjct: 124 G----EEAKLFLVALGVFFPIYANTLHGIRSVDPGLVEMGRVYGMSRTELFSRVVLPGAL 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G   A G  W   IV+E  S       ++GLG    ++ E      VVL +LI  
Sbjct: 180 PSIFVGLRYALGIMWLTLIVAETIS------ASSGLGYMAMQAREFMLVDVVVLAILIYA 233

Query: 564 CFVLALNRFL---------WHPLYLYG 581
                 +            W+P Y   
Sbjct: 234 ALGKLADALTRQLERACLAWNPAYRSA 260



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 92/245 (37%), Gaps = 17/245 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             ++  L   +    P D+V           L      +TLR L+  VI     F     
Sbjct: 28  AAVSAGLVSNRFMPAPLDVVRAGWEAGRTGELWTNLGVSTLRALAGFVIGGGIGFALGLA 87

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              SR    +    + +++++P L  +   +++F           E A +F +     + 
Sbjct: 88  NGLSRLSERLTDTSVQMVRNVPHLSLIPLVILWFGIG--------EEAKLFLVALGVFFP 139

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    + ++   L E+ R + +S  + F  + +P ++P +   +  ++   W  ++ 
Sbjct: 140 IYANTLHGIRSVDPGLVEMGRVYGMSRTELFSRVVLPGALPSIFVGLRYALGIMWLTLIV 199

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           +E I          G+G     A +   +  ++ A+L    +  L D L   L R  + W
Sbjct: 200 AETISASS------GLGYMAMQAREFMLVDVVVLAILIYAALGKLADALTRQLERACLAW 253

Query: 267 SNKFR 271
           +  +R
Sbjct: 254 NPAYR 258


>gi|58825941|gb|AAW82805.1| putative ABC MSA transporter membrane-associated permease component
           [Methylosulfonomonas methylovora]
          Length = 158

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV+   +IA +I IP G+ +    +      P  ++L   P   + P  +     + 
Sbjct: 6   SVKRVMAGFLIAQLIGIPFGLALAVNRYFRDIFFPPFEILRPIPPLAWVPAALI----FW 61

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + +  +   G  + I+ NV+ GA      +   A S     W  +  IILPG  P 
Sbjct: 62  PTNEMSIIFVTFLGAFFTIVINVLGGARTIDVRYLRAAQSMGANQWHLFSRIILPGTLPS 121

Query: 506 YVTGAITACGGAWNASIVSEVA 527
             TGA    G  WN  + +E+ 
Sbjct: 122 IFTGAAVGMGITWNVVLAAEMV 143



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 62/147 (42%), Gaps = 8/147 (5%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+++  +I+ L    +    A +R    +  P  +I++ IP L ++   ++++   
Sbjct: 5   ESVKRVMAGFLIAQLIGIPFGLALAVNRYFRDIFFPPFEILRPIPPLAWVPAALIFW--- 61

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E++ IF  F    + +  ++      I       ++S   + W  F  + +P
Sbjct: 62  -----PTNEMSIIFVTFLGAFFTIVINVLGGARTIDVRYLRAAQSMGANQWHLFSRIILP 116

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213
            ++P +     + M   W  V+A+EM+
Sbjct: 117 GTLPSIFTGAAVGMGITWNVVLAAEMV 143


>gi|224370867|ref|YP_002605031.1| ProW [Desulfobacterium autotrophicum HRM2]
 gi|223693584|gb|ACN16867.1| ProW [Desulfobacterium autotrophicum HRM2]
          Length = 289

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 96/240 (40%), Gaps = 15/240 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F  L + ++I I+ +L   +        ++  +   +        A  T   +++++ +
Sbjct: 49  FFVWLPWPVLIIIVFLLGWRLVGRLRDGLLLATLLFLVGCFGYWDLAMMTLALIMASVSV 108

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+       L A S R   VL PILD MQ++P   +L   ++ F           ++ A
Sbjct: 109 SLVIGIPTGILMAASDRFSKVLKPILDGMQTMPSFVYLIPAMMLFGLG--------KVPA 160

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FA     V  +       +  +   + E + +F    W+    + +P + P ++  +  
Sbjct: 161 LFATIIYAVPPVIRLTNVGIREVDPSIVEAAHAFGADPWKVLTSVELPLARPSIMVGINQ 220

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +       VV + MI          G+G  + LAI   ++   + A + ++ +  + D++
Sbjct: 221 TTMMALSMVVIASMI-------GARGLGLEVLLAINRIEIGRGVKAGMAIVFLAIIVDRI 273



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 78/237 (32%), Gaps = 17/237 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLII 395
                  + V+  +   + W+ +G + +      +L+++       L  +T+  ++  + 
Sbjct: 48  KFFVWLPWPVLIIIVFLLGWRLVGRLRDGLLLATLLFLVGCFGYWDLAMMTLALIMASVS 107

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           ++ +I IP GI +      S  ++P    +   P+ V+    +           +     
Sbjct: 108 VSLVIGIPTGILMAASDRFSKVLKPILDGMQTMPSFVYLIPAMMLFGLG----KVPALFA 163

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I      ++     G         E A +F    W+    + LP   P  + G      
Sbjct: 164 TIIYAVPPVIRLTNVGIREVDPSIVEAAHAFGADPWKVLTSVELPLARPSIMVGINQTTM 223

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A +  +++ +           GLG  +  +  +      V   + +    + ++R 
Sbjct: 224 MALSMVVIASMIG-------ARGLGLEVLLAINRIEIGRGVKAGMAIVFLAIIVDRI 273


>gi|218688777|ref|YP_002396989.1| alkanesulfonate transporter permease subunit [Escherichia coli
           ED1a]
 gi|218426341|emb|CAR07166.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 263

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQNLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q  + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQNLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262


>gi|116690902|ref|YP_836525.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|116648991|gb|ABK09632.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 269

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 78  SAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 136 --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 194 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGAI 247

Query: 566 VLALN 570
               +
Sbjct: 248 AWLFD 252



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 71  LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVV 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 131 IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 183 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 236

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 237 VVMGILIIGAIAWLFDLAMRWIERRVVPWKGR 268


>gi|126180217|ref|YP_001048182.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanoculleus marisnigri JR1]
 gi|125863011|gb|ABN58200.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanoculleus marisnigri JR1]
          Length = 646

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 82/483 (16%), Positives = 160/483 (33%), Gaps = 40/483 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----L 116
           +      T L M+ A  +S+      A +A    R   V+ P ++++  IP + +    L
Sbjct: 99  IVGTVLVTALAMVIAGPLSICTAIYIAEIAG--PRTREVIKPAVELLAGIPSVVYGFFGL 156

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +    +      + LA    +    +  +T     ++ ++PR+  E S +   + 
Sbjct: 157 ILLTDWIRIAFDQPSGSSWLAGSILLAIMAIPTITSVAEDAVSSVPREFREGSLALGATH 216

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP------------- 223
           WQ    + VP ++ G+   +++ M       +A  MI     VIP P             
Sbjct: 217 WQTIRRVVVPGALSGISAAIILGMGRAIGETMAVLMITGNAAVIPDPIYDVFSPVRTLTG 276

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
            +G  +            L+ +  +L  I L      R +I    + +  + T       
Sbjct: 277 TLGIEMGEVAFGSTHYHALFGVAAVLLFITLAINSAARVII---TRIQGTQGTARPTPSG 333

Query: 284 WVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM 343
            V    R +   R +  ++       S    +L       R  F    L +     V   
Sbjct: 334 RVKTATRGSVPYRALTAAASRITHAASAPFGRLLPPRASQRCAFLLISLSVAI---VIAA 390

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +  F +V   A  I+W+ +            ++   +G         L+  A  + +P
Sbjct: 391 LGVILFEIVVNGAGAISWEFLTGSPRDLGRAGGIFPAIVGT------FYLVGGALAVALP 444

Query: 404 VGIWIGFRPHISSKIQPFAQLLAA-------FPANVF--FPLVVSCVSYYHLNPNLWLSL 454
           +GI         +   P  + + A        P+ VF  F      +        +   +
Sbjct: 445 LGIATAVYLIEYTAETPLTRSIRAAVDLLNGTPSIVFGLFGFAFLVLFMGFGVSLIAGQI 504

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +       I+        + P   +E + +   T W+    ++LP   P  +TGAI + 
Sbjct: 505 TLGLMILPTIIRTTEEALRSIPGSLREGSYALGATKWQTISRVVLPPALPGILTGAILSI 564

Query: 515 GGA 517
           G A
Sbjct: 565 GRA 567



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 10/176 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLA 426
           N   +     V  L   T+    + ++IA  + I   I+I     P     I+P  +LLA
Sbjct: 85  NPAGHDPAYGVFPLIVGTVLVTALAMVIAGPLSICTAIYIAEIAGPRTREVIKPAVELLA 144

Query: 427 AFPANVF----FPLVVSCVSYYHLNPN----LWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+      L+   +      P+    L  S+L+       I        S+ P +
Sbjct: 145 GIPSVVYGFFGLILLTDWIRIAFDQPSGSSWLAGSILLAIMAIPTITSVAEDAVSSVPRE 204

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           F+E + +   T W+  R +++PG         I   G A   ++   + +     +
Sbjct: 205 FREGSLALGATHWQTIRRVVVPGALSGISAAIILGMGRAIGETMAVLMITGNAAVI 260


>gi|301064439|ref|ZP_07204858.1| ABC transporter, permease protein [delta proteobacterium NaphS2]
 gi|300441449|gb|EFK05795.1| ABC transporter, permease protein [delta proteobacterium NaphS2]
          Length = 269

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV     +A  + +P+GI  G    I   +      L A P   + PL +    
Sbjct: 74  AASSLLRVGCGFAVAVAVGLPLGILSGRLSVIQKLLSTTVNALRAVPGITWLPLAMIWFG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       L+     + +  N  AGA        +  +   +   R    I++PG 
Sbjct: 134 IG----MKTTVFLVAMAAFFPVFLNAAAGARQVDPLLLQAGAMMGVRRLRGTFAILIPGA 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ +TG     G +W   ++ E+           GLGA I ++   G    +V+G++I+
Sbjct: 190 MPHLMTGLRLGLGISWAYLVLGEL------TGVQNGLGAVIMDARMLGRIDMIVVGIIII 243

Query: 563 CCFVLALNRFL 573
                  +R L
Sbjct: 244 AVIGRLADRLL 254



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A+ + LR+     +++        L+ +   +  +L   ++ ++++P + +L   +++F 
Sbjct: 74  AASSLLRVGCGFAVAVAVGLPLGILSGRLSVIQKLLSTTVNALRAVPGITWLPLAMIWFG 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         +F +  +  + +  +       +   L +      +   +  + + 
Sbjct: 134 IGM--------KTTVFLVAMAAFFPVFLNAAAGARQVDPLLLQAGAMMGVRRLRGTFAIL 185

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP L+  + + +   W ++V  E+  V +      G+G+ I  A     +  I+  
Sbjct: 186 IPGAMPHLMTGLRLGLGISWAYLVLGELTGVQN------GLGAVIMDARMLGRIDMIVVG 239

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  +  L D+LL
Sbjct: 240 IIIIAVIGRLADRLL 254


>gi|325964252|ref|YP_004242158.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470339|gb|ADX74024.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 257

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + ++P  +   A P  V  P+++  +       +     ++I G  W +L N I G
Sbjct: 85  RWLRALLEPTLEFFRAIPPPVLVPVLMLLMGIT----DSMKVTVIISGCIWPVLLNTIEG 140

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A      + A ++ I+GW   RY++LP   P  + G   +        ++SE+ +   
Sbjct: 141 VRAVDPVLSDSAHTYGISGWARIRYLVLPSASPQIMAGVRQSLSLGLILMVISEMFA--- 197

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
               ++GLG  I +     + PE+  G++++    +A++      ++ +  R
Sbjct: 198 ---SSSGLGFTIVQFQRSFAIPEMWSGIVVLGLLGVAMS-----FIFQWAER 241



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 69/176 (39%), Gaps = 17/176 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L  +L P L+  ++IP    +   ++             +   +  I +  +W +  +
Sbjct: 85  RWLRALLEPTLEFFRAIPPPVLVPVLMLLMGI--------TDSMKVTVIISGCIWPVLLN 136

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             + +  +   L + + ++ +SGW +  YL +P + P ++  +  S+S G   +V SEM 
Sbjct: 137 TIEGVRAVDPVLSDSAHTYGISGWARIRYLVLPSASPQIMAGVRQSLSLGLILMVISEMF 196

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
                     G+G  I    +   +  +   ++ +  +      +     R ++ W
Sbjct: 197 ASSS------GLGFTIVQFQRSFAIPEMWSGIVVLGLLGVAMSFIFQWAERNILRW 246


>gi|225026335|ref|ZP_03715527.1| hypothetical protein EUBHAL_00577 [Eubacterium hallii DSM 3353]
 gi|224956345|gb|EEG37554.1| hypothetical protein EUBHAL_00577 [Eubacterium hallii DSM 3353]
          Length = 259

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V G+  + +        P  + +     +   +L      + LR     ++SL+   V  
Sbjct: 28  VAGVDGLGIWKAYAMPSPVGVWNSFVEMMKQGTLLAAIGNSILRGAIGYILSLIIGAVIG 87

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L      L   L P++  +Q++P + ++ F++++F           + A IF +     
Sbjct: 88  ILINHFSFLHRNLRPLIMGIQTLPSICWVPFSILWFGL--------TQTAIIFVVIMGSA 139

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           ++M  ++  ++ N+P   ++ + +   +  Q +W +  P S+P L+  M    S  W  +
Sbjct: 140 FSMAIAVDNAILNVPPIYKKAALTMGANQKQIYWKVIFPASLPELISGMKQGWSFAWRAL 199

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           ++ E++          G+G  +       D+  ++  M+ ++ V  L DQ++F
Sbjct: 200 MSGEVMTTSI------GLGQTLMTGRNLADINQVMLVMVVIVVVGILIDQVVF 246



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 16/210 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWI 402
              V GV     W++         +   + ++  G +      ++ R  +  I++ II  
Sbjct: 25  IFYVAGVDGLGIWKAYAMPSPVGVWNSFVEMMKQGTLLAAIGNSILRGAIGYILSLIIGA 84

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI I     +   ++P    +   P+  + P  +             +  ++I G+ +
Sbjct: 85  VIGILINHFSFLHRNLRPLIMGIQTLPSICWVPFSILWFGLTQT----AIIFVVIMGSAF 140

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   V       P  +K+ A +      + +  +I P   P  ++G       AW A +
Sbjct: 141 SMAIAVDNAILNVPPIYKKAALTMGANQKQIYWKVIFPASLPELISGMKQGWSFAWRALM 200

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             EV +       + GLG  +         
Sbjct: 201 SGEVMT------TSIGLGQTLMTGRNLADI 224


>gi|219685898|ref|ZP_03540703.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii Far04]
 gi|219672566|gb|EED29600.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia garinii Far04]
          Length = 299

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 85/207 (41%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + +  T   +  ++ +S++       L     R  + L PILD+MQ++P   +L   +
Sbjct: 84  LWKASMDTIAIIFVSVFVSVILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F             +AIFA     +  +       +  +  ++ E ++SF  S  +  
Sbjct: 144 PFFGMG--------TASAIFATIIFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRIL 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +   
Sbjct: 196 LQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFGE 248

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L + L ++ +  + D+++    I +S
Sbjct: 249 GLISGLAVVIIAIILDRVMQSIFIKFS 275



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +F         + +  + +  I+  F +     +      T+  + V + ++ I+ IP+
Sbjct: 50  IVFILTACLLSFVFLKKRLVFLILPGFFFILYFDLWKASMDTIAIIFVSVFVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRVM 267


>gi|150376982|ref|YP_001313578.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031529|gb|ABR63645.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 275

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 84/242 (34%), Gaps = 21/242 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVV 391
           +L          +   + W    ++ +     D   +                 ++ RV 
Sbjct: 30  LLTALVLIAFWLLVTEMGWIKPLFLPSPLAVWDKFVIALTEGVSNSTLAQHTLASLGRVF 89

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              ++A +  +PVGI +G    +     P  +     P   + PL++  +      P ++
Sbjct: 90  GAFLLALVTAVPVGILMGVNRVVRGLFDPIIEFYRPLPPLAYLPLIIIWLGIGEF-PKVF 148

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  L IF     +     AG  +   +    A +   T  +   ++I+    P   TG  
Sbjct: 149 LIYLAIFA---PMAIAARAGVRSVSTEQIHAAYAMGATRAQVIGHVIMKAALPEIFTGMR 205

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G  W   + +E+ +         GLG  +  + E  +   V++G++++  F  A + 
Sbjct: 206 IGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAEYLASDTVIMGIVVIGVFAFAFDL 259

Query: 572 FL 573
            +
Sbjct: 260 MI 261



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 101/255 (39%), Gaps = 23/255 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMV 77
           L+AF L++  +  +         P  + D   I L       +L Q+   +  R+  A +
Sbjct: 36  LIAFWLLVTEMGWIKPLF--LPSPLAVWDKFVIALTEGVSNSTLAQHTLASLGRVFGAFL 93

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++L+       L   +R +  +  PI++  + +P L +L   +++            E  
Sbjct: 94  LALVTAVPVGILMGVNRVVRGLFDPIIEFYRPLPPLAYLPLIIIWLGIG--------EFP 145

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F I+ +    M  +    + ++  +    + +   +  Q   ++ +  ++P +   M 
Sbjct: 146 KVFLIYLAIFAPMAIAARAGVRSVSTEQIHAAYAMGATRAQVIGHVIMKAALPEIFTGMR 205

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +    F +D 
Sbjct: 206 IGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAEYLASDTVIMGIVVIGVFAFAFDL 259

Query: 257 --QLLFRPMIVWSNK 269
             + L + +I W  K
Sbjct: 260 MIRYLEKTLIPWKGK 274


>gi|301067614|ref|YP_003789637.1| proline/glycine betaine ABC transporter permease/substrate binding
           protein [Lactobacillus casei str. Zhang]
 gi|300440021|gb|ADK19787.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus casei str.
           Zhang]
          Length = 510

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L     +     L A++I+++     A       +   VL+ +  ++Q+IP L
Sbjct: 8   ISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             L AI A+    +  +  + Y  L +I    EE + +F 
Sbjct: 68  ALLGLLIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  +K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I
Sbjct: 120 MSRLRKLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D    L   L    +  ++  LL
Sbjct: 173 DRNDAALTLMGALAAALLAIVFSWLL 198



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+ +W+      ++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|89895481|ref|YP_518968.1| hypothetical protein DSY2735 [Desulfitobacterium hafniense Y51]
 gi|89334929|dbj|BAE84524.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 255

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 16/242 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           LL+F++VI +  +L        VP    ++  +   L    L      T  R+L+ + + 
Sbjct: 15  LLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIHKILTSPDLYAMIPLTAGRLLAGLSLG 74

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +    V   L     ++  VL P++ IMQ++P + ++   +V+F              A+
Sbjct: 75  VSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFGFNG--------KPAV 126

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  S +  +T ++      I ++L E++  +R S  ++  ++ +P  +P       ++
Sbjct: 127 FIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIA 186

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  GW   V +E++   D      GIG  I L     +  +I+   + ++ + +L D L+
Sbjct: 187 LGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLSDFLI 240

Query: 260 FR 261
            +
Sbjct: 241 GK 242



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +  I    T  D+  +I L   T  R++  + +   + + +GI +G    +   + P 
Sbjct: 42  SVLAEIHKILTSPDLYAMIPL---TAGRLLAGLSLGVSLGLVLGILMGNFSQVKGVLSPL 98

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             ++   P   +  L +    +           ++I  T   I  NV AG      +  E
Sbjct: 99  VGIMQTVPPVSWVVLALVWFGFNGK----PAVFIVILSTLPVITINVCAGFRRIDKNLLE 154

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +AS +  +  +  R++ILP I PY+ +    A G  W  ++++EV +       + G+G 
Sbjct: 155 MASLYRFSKVKRLRHVILPSILPYFKSAFQIALGSGWKIAVMAEVLT------TSDGIGG 208

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
            I           ++   +++       +  +   L+ 
Sbjct: 209 MIKLGRLNVEPESIIAWSILVVLLFYLSDFLIGKFLFR 246


>gi|86137727|ref|ZP_01056303.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85825319|gb|EAQ45518.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 683

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 90/607 (14%), Positives = 189/607 (31%), Gaps = 85/607 (14%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L+I     L   +    +       + + L     PQ    T   +  ++ ++L+    
Sbjct: 90  PLLIAATVALGWRLGGIKMAAMAAIGLGLVLVSGYWPQ-GMNTLALVAVSVPLALVVGAG 148

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +       +  +LD+MQ++P   +LT  +V F     G V+G   +AI+A    
Sbjct: 149 IGILANEFPAFRAPVQALLDVMQTVPTFAYLTPLLVLFGF---GPVVGLIASAIYA---- 201

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  ++   L  +  +++E +     +  Q+ + + +P +   ++  +   +     
Sbjct: 202 -APPMARNVLLGLQRVEHEVKEAAIMAGGTRIQQLFQVEIPAAKVQIMVGVNQCLMAALS 260

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ----LLFR 261
            V+ + +I   +       IG  + L +++      + A   ++    L D+    L   
Sbjct: 261 MVIIAAVIGGFND------IGWEVLLTMRKAQFGPAMLAGAVIVIFAILIDRMSATLAQE 314

Query: 262 PMIVWSNKFRLERTTG------------------------IYPADSWVLYLFRKT--NFL 295
              +W  +  L                                 DSW+    R       
Sbjct: 315 RRQLWDGRVSLGILLLGLIISLVFWSRIGDPGSYQLMDPLADGLDSWLTDFTRANAEALT 374

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
            F     +    PL   + +            P   L       +          V  G+
Sbjct: 375 SFKNGVMFYVLLPLRIGLDQAILPFTWGFQWTPVMSLWFYGAAALVGAACALRGQVTLGL 434

Query: 356 AIGIAWQSIGYIVNHFTYQDVL-----------------------------YVIWLGCIT 386
            + IA   +   V+  ++  VL                              +     ++
Sbjct: 435 VVLIAAGILETGVSQLSWPFVLAGAAALSWVAGGPRLALLSLVLLTTILVSGLWERALLS 494

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     +   +++   +G+     P     ++P   +L   P  VF   V+        
Sbjct: 495 LYLSGAAVFACAVLGGAIGLLSAVSPLAWRIVRPICDMLQTIPLFVFLIPVLMVFQIGEF 554

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      L +I      ++     G  + P+D  E A++   TGW+  R +  P   P  
Sbjct: 555 S----AFLAIIAYAVVPMIRYTRQGLISTPDDMIEAATASGATGWQMMRDVRAPYAAPTI 610

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G       A+   +++ +         TTGLG  I  +  K      +     M    
Sbjct: 611 LLGLNQTILYAFAMLVIAALIG-------TTGLGQSIYLALGKADVGLGISAGAAMAILA 663

Query: 567 LALNRFL 573
           L  +R +
Sbjct: 664 LIADRIV 670



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-----LGCITMFRVVVLI 394
            +Y+L    + ++    + + W+  G  +       +  V+       G  T+  V V +
Sbjct: 80  TNYVLSAVPWPLLIAATVALGWRLGGIKMAAMAAIGLGLVLVSGYWPQGMNTLALVAVSV 139

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A ++   +GI     P   + +Q    ++   P   +       +  +   P + L  
Sbjct: 140 PLALVVGAGIGILANEFPAFRAPVQALLDVMQTVPTFAYL---TPLLVLFGFGPVVGLIA 196

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             I+     +  NV+ G     ++ KE A     T  +    + +P      + G     
Sbjct: 197 SAIYAA-PPMARNVLLGLQRVEHEVKEAAIMAGGTRIQQLFQVEIPAAKVQIMVGVNQCL 255

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  I++ V    +       +G  +  +  K  F   +L   ++  F + ++R 
Sbjct: 256 MAALSMVIIAAVIGGFND------IGWEVLLTMRKAQFGPAMLAGAVIVIFAILIDRM 307


>gi|227532962|ref|ZP_03963011.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227189363|gb|EEI69430.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 510

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L     +     L A++I+++     A       +   VL+ +  ++Q+IP L
Sbjct: 8   ISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             L AI A+    +  +  + Y  L +I    EE + +F 
Sbjct: 68  ALLGLLIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  +K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I
Sbjct: 120 MSRLRKLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D    L   L    +  ++  LL
Sbjct: 173 DRNDAALTLMGALAAALLAIVFSWLL 198



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+ +W+      ++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|94498974|ref|ZP_01305512.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94428606|gb|EAT13578.1| ABC-type proline/glycine betaine transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 276

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + ++ +        +    P  IV  + +  ++    Q    T   ++ A    +L    
Sbjct: 56  LFILIVGAFAFWYQRRWGTPIFIVASLLLIWNLGY-WQETIETISLVIFATGFCVLIGVP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA    L  VL P+LD+MQ+IP   +L  T+  F     G V G     +FAI   
Sbjct: 115 IGIAAAHRPWLYRVLRPVLDLMQTIPPFVYLIPTLTLFGL---GVVPGLISTIVFAIAAP 171

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    Y  +  +P++L E  ++F  +       + +P +M  +   +   +     
Sbjct: 172 -----IRLTYLGISEVPKELLEAGKAFGCTKQNLLVKIEIPAAMSSIRAGITQCIMLSLS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   D+ +   A L ++ V  + D+L 
Sbjct: 227 MVVIAALV-------GADGLGKPVVRALNTVDIASGFEAGLAIVLVAIILDRLF 273



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 11/213 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W +  +IV        L        T+  V+       +I +P+GI    RP +   ++P
Sbjct: 72  WGTPIFIVASLLLIWNLGYWQETIETISLVIFATGFCVLIGVPIGIAAAHRPWLYRVLRP 131

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G S  P +  
Sbjct: 132 VLDLMQTIPPFVYL---IPTLTLFGLGVVPGLISTIVFAIAAPIRL-TYLGISEVPKELL 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E   +F  T       I +P        G       + +  +++ +           GLG
Sbjct: 188 EAGKAFGCTKQNLLVKIEIPAAMSSIRAGITQCIMLSLSMVVIAALVG-------ADGLG 240

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  +             L +    + L+R  
Sbjct: 241 KPVVRALNTVDIASGFEAGLAIVLVAIILDRLF 273


>gi|121607385|ref|YP_995192.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552025|gb|ABM56174.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 266

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 28/267 (10%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQE--------TTVPRDIVDIVPITLDV------H 59
           R+  +    L  + V+G +  L  G              P+ +   +   LD+       
Sbjct: 8   RLGADGLGALGALAVLGALVALWWGASNAGWVSRVFLPTPQAVFASLLEGLDLSRDAGNG 67

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   T   ML   +++ LF  +  T    S      + P L+ ++ +P    L   
Sbjct: 68  ELIAFTQATVGHMLQGWLLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPLA 127

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F               +F +    +W +  +    L  +   L EV+R  ++S   +
Sbjct: 128 LSIFGLNRG--------TVLFVVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQ 179

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W +G+P +MP ++  M ++++      V  EMI          G+G  I LA +     
Sbjct: 180 VWKMGLPNAMPDILAGMRLALTVALIVAVVGEMIA------AQSGLGQAILLAARAFRAS 233

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVW 266
            +   +  + G+ F+ + LL      W
Sbjct: 234 DLFAGIALLGGIGFVSNALLAGAEKRW 260



 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I     T+  ++   ++AS+  + +G  IG  P   + +QP  + +   PA+   PL
Sbjct: 67  GELIAFTQATVGHMLQGWLLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPL 126

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +S            +  ++ FG  W +L   + G +       EVA    ++       
Sbjct: 127 ALSIFGLNRGT----VLFVVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQVWK 182

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G   A   A   ++V E+ +        +GLG  I  +       ++ 
Sbjct: 183 MGLPNAMPDILAGMRLALTVALIVAVVGEMIA------AQSGLGQAILLAARAFRASDLF 236

Query: 557 LGVLIMCCFVLALNRFL 573
            G+ ++       N  L
Sbjct: 237 AGIALLGGIGFVSNALL 253


>gi|264679935|ref|YP_003279844.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni
           CNB-2]
 gi|299529941|ref|ZP_07043369.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni S44]
 gi|262210450|gb|ACY34548.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni CNB-2]
 gi|298722113|gb|EFI63042.1| taurine transport system permeaseprotein tauC [Comamonas
           testosteroni S44]
          Length = 293

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV V   +A +I +P+GI +G          P  +     P   + PL++      
Sbjct: 101 ASLLRVTVAFWLAFMIAVPLGIAMGMSRFARGIFDPPIEFYRPLPPLAYLPLIIIWFGI- 159

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    LL+       +     +G  +   +    A S   + ++  R++ILP   P
Sbjct: 160 ---DETPKILLIFLSCFAPLALAARSGMRSAAQEQINAAYSMGASYFQVIRHVILPAALP 216

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   + +E+ +         GLG  +  ++       V++G++++  
Sbjct: 217 DILVGMRIAIGFGWTTLVAAEMVA------ANVGLGQMVLNASNFLRTDIVIMGIIVIGV 270

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
                + F+      +  + L
Sbjct: 271 IAYVFDLFM-----RWVEKRL 286



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 85/218 (38%), Gaps = 29/218 (13%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFV------YATLAAKSRRLGMVLVPILDIMQSIPILG 114
           L Q+ S + LR+  A      F                SR    +  P ++  + +P L 
Sbjct: 95  LWQHFSASLLRVTVA------FWLAFMIAVPLGIAMGMSRFARGIFDPPIEFYRPLPPLA 148

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   +++F      K        I  IF S    +  +    + +  ++    + S   
Sbjct: 149 YLPLIIIWFGIDETPK--------ILLIFLSCFAPLALAARSGMRSAAQEQINAAYSMGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +Q   ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A  
Sbjct: 201 SYFQVIRHVILPAALPDILVGMRIAIGFGWTTLVAAEMVAANV------GLGQMVLNASN 254

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
                 ++  ++ +  + +++D     + + ++ W  +
Sbjct: 255 FLRTDIVIMGIIVIGVIAYVFDLFMRWVEKRLVPWKGR 292


>gi|326404146|ref|YP_004284228.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325051008|dbj|BAJ81346.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 272

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 9/191 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM R++     A  + +P+G+     P     +QP   +L A PA    P+++      
Sbjct: 73  LTMVRLLGGFACAVALAVPLGVISALWPPAGKLLQPVFAVLMAVPAIAIVPILMLITGIG 132

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +         ++IF     I   V  G       +   A SF       +R+I+LPGI  
Sbjct: 133 NATD----VTVVIFTAFVPIAVYVHEGVKLVDRRYYWTARSFGTRPVDVFRHILLPGIAV 188

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G     G AW + I +E          + GLG  I ++ +      + L ++++  
Sbjct: 189 PLIAGLRMGMGYAWRSLIATESL-----TALSGGLGYSIFQAAQFFDTRTIYLYMVVIAL 243

Query: 565 FVLALNRFLWH 575
               +      
Sbjct: 244 LGFGIEALFRR 254



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 73/204 (35%), Gaps = 13/204 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L    + T +R+L     ++        ++A     G +L P+  ++ ++P +  + 
Sbjct: 64  PFQLEHDITLTMVRLLGGFACAVALAVPLGVISALWPPAGKLLQPVFAVLMAVPAIAIVP 123

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++                 +  +  +    +   +++ +  + R     +RSF     
Sbjct: 124 ILMLITGIG--------NATDVTVVIFTAFVPIAVYVHEGVKLVDRRYYWTARSFGTRPV 175

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             F ++ +P     L+  + M M   W  ++A+E +          G+G  I  A +  D
Sbjct: 176 DVFRHILLPGIAVPLIAGLRMGMGYAWRSLIATESLTALS-----GGLGYSIFQAAQFFD 230

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
              I   M+ +  + F  + L  R
Sbjct: 231 TRTIYLYMVVIALLGFGIEALFRR 254


>gi|188582838|ref|YP_001926283.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346336|gb|ACB81748.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 292

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 95/261 (36%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +   L  V      ++ L   +    P D+            L +    +  R  
Sbjct: 44  KLLPWLLPTLVIVGWQAAASLGLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAA 103

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  +I       +      S     +    L +++++P L  +   +++F          
Sbjct: 104 SGFLIGGGIGLFFGLANGLSNLSEKLTDTTLQMVRNVPHLSLIPLVILWFGID------- 156

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +     + +  +    + ++   L E+ R + ++  + FW + +P ++P + 
Sbjct: 157 -EGAKLFLVALGVFFPIYANTLHGIRSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIF 215

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  ++ A+L    +  
Sbjct: 216 VGIRYALGIMWLTLIVAETISANS------GLGYMAMQAREFMLVDVVVLAILIYAALGK 269

Query: 254 LYDQL---LFRPMIVWSNKFR 271
           L D L   L R  + W+  +R
Sbjct: 270 LADSLTRALERTCLAWNPAYR 290



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 82/280 (29%), Gaps = 23/280 (8%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
               L     +      + R   P    Q   + R+     + W      +    A  S+
Sbjct: 6   AIRSLPGRANRAEAAAPLARRAQPSKS-QSGRSLRLPTGKLLPWLLPTLVIVGWQAAASL 64

Query: 365 GYIVNHFTYQ--DVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRP 412
           G +   F     DV    W             ++  R     +I   I +  G+  G   
Sbjct: 65  GLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAASGFLIGGGIGLFFGLANGLSN 124

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                     Q++   P     PLV+                L+  G  + I  N + G 
Sbjct: 125 LSEKLTDTTLQMVRNVPHLSLIPLVILWFGI----DEGAKLFLVALGVFFPIYANTLHGI 180

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            +      E+   + +     +  ++LPG  P    G   A G  W   IV+E  S    
Sbjct: 181 RSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIFVGIRYALGIMWLTLIVAETIS---- 236

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               +GLG    ++ E      VVL +LI        +  
Sbjct: 237 --ANSGLGYMAMQAREFMLVDVVVLAILIYAALGKLADSL 274


>gi|163852820|ref|YP_001640863.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|254562585|ref|YP_003069680.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium
           extorquens DM4]
 gi|163664425|gb|ABY31792.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|254269863|emb|CAX25841.1| alkanesulfonate transport protein, membrane component of ABC
           superfamily [Methylobacterium extorquens DM4]
          Length = 286

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 94/261 (36%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +   L         +  L   +    P D+            L +    +  R  
Sbjct: 38  KLLPWLLPTLVLAGWQAAASFGLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAA 97

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I       +      S     +    L ++++IP L  +   +++F          
Sbjct: 98  AGFLIGGGIGLSFGLANGLSNLSEKLTDTTLQMVRNIPHLSLIPLVILWFGID------- 150

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +     + +  +    + ++   L E+ R + ++  + FW + +P ++P + 
Sbjct: 151 -EGAKLFLVALGVFFPVYANTLHGIRSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIF 209

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  ++ A+L   G+  
Sbjct: 210 VGVRYALGIMWLTLIVAETISANS------GLGYMAMQAREFMLVDVVVLAILIYAGLGK 263

Query: 254 LYDQL---LFRPMIVWSNKFR 271
           + D L   L R  + W+  +R
Sbjct: 264 IADSLTRALERTCLSWNPAYR 284



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 82/289 (28%), Gaps = 31/289 (10%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R+L                  R+     + W      +A   A  S G +   F  
Sbjct: 8   SAAIRSLPGRASRAKAAAPLQRKPLRLPTGKLLPWLLPTLVLAGWQAAASFGLVSTRFMP 67

Query: 374 Q--DVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
              DV    W             ++  R     +I   I +  G+  G            
Sbjct: 68  APLDVAAAGWRLAQTGELWENLWVSFARAAAGFLIGGGIGLSFGLANGLSNLSEKLTDTT 127

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q++   P     PLV+                L+  G  + +  N + G  +      E
Sbjct: 128 LQMVRNIPHLSLIPLVILWFGI----DEGAKLFLVALGVFFPVYANTLHGIRSVDPQLIE 183

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +   + +     +  ++LPG  P    G   A G  W   IV+E  S        +GLG 
Sbjct: 184 MGRVYGMNRRELFWRVVLPGALPSIFVGVRYALGIMWLTLIVAETIS------ANSGLGY 237

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYLYG 581
              ++ E      VVL +LI        +            W+P Y   
Sbjct: 238 MAMQAREFMLVDVVVLAILIYAGLGKIADSLTRALERTCLSWNPAYRNA 286


>gi|121535203|ref|ZP_01667018.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
 gi|121306194|gb|EAX47121.1| binding-protein-dependent transport systems inner membrane
           component [Thermosinus carboxydivorans Nor1]
          Length = 263

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 12/255 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R     R  F E  +   +         + W  +     I   +     ++    +  ++
Sbjct: 4   RREITNRLAFMEQQMPRWAAGAAILTALVLWELISRSGLISELYLPAPTVIIRTGWDMII 63

Query: 378 Y--VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     ++ R+++  ++ S + I +G+  GF     +   P    +   P     P
Sbjct: 64  SGELLDNSQASLSRILLGFLLGSSLGILMGLATGFSKLAEAVGIPLIYAVYPIPKIALLP 123

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +    L+    +S     G  + ++ N  +G         +VA SF  T      
Sbjct: 124 LIILWLGIGELSKVTIIS----LGVFFPVVINTYSGVKNVDPLLIKVAISFKATRSHIIA 179

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP   P    G   A G +    + +E+ +         G+GA I    +     ++
Sbjct: 180 KVILPAALPAIFAGLKMAAGTSLLLLVAAEMIA------AKEGIGALILRYGDLMLTTKL 233

Query: 556 VLGVLIMCCFVLALN 570
           ++GVL +    +  N
Sbjct: 234 MVGVLTLSLLGVIFN 248



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 87/230 (37%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I+      +    L   +  +  R+L   ++      +       S+    V +
Sbjct: 48  LPAPTVIIRTGWDMIISGELLDNSQASLSRILLGFLLGSSLGILMGLATGFSKLAEAVGI 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   +++            EL+ +  I     + +  + Y  + N+
Sbjct: 108 PLIYAVYPIPKIALLPLIILWLGIG--------ELSKVTIISLGVFFPVVINTYSGVKNV 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+ SF+ +       + +P ++P +   + M+       +VA+EMI   +    
Sbjct: 160 DPLLIKVAISFKATRSHIIAKVILPAALPAIFAGLKMAAGTSLLLLVAAEMIAAKE---- 215

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
             GIG+ I           ++  +LT+  +  +++  L    R +I W N
Sbjct: 216 --GIGALILRYGDLMLTTKLMVGVLTLSLLGVIFNSSLEWIERRIITWKN 263


>gi|116253276|ref|YP_769114.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257924|emb|CAK09022.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 305

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L+A  + ++        AA+   +   + P+LD+MQ+IP   +L   ++
Sbjct: 114 WKETTETLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPVLDLMQTIPTFVYLIPALI 173

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI               + + P  L E + +F  +  Q   
Sbjct: 174 LFGL---GMVPGLIATVIFAIPAP-----IRLTRLGIISTPPSLVEAAVAFGATPIQVLR 225

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +PF+ P ++  +  ++      VV + ++         PG+G  +  A+   ++   
Sbjct: 226 KIELPFATPQIMAGLTQTIMLSLSMVVIAALV-------GAPGLGVPVVRALNTVNIAKG 278

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ +  + D++ 
Sbjct: 279 FEAGFCIVILAIILDRMF 296



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  +I IP+GI    RP + + ++P   L+   P  V+    +       
Sbjct: 120 TLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPVLDLMQTIPTFVYLIPALILFGLGM 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G  + P    E A +F  T  +  R I LP   P 
Sbjct: 180 VPGLIATVIFAIPA---PIRL-TRLGIISTPPSLVEAAVAFGATPIQVLRKIELPFATPQ 235

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +  +       +   
Sbjct: 236 IMAGLTQTIMLSLSMVVIAALVG-------APGLGVPVVRALNTVNIAKGFEAGFCIVIL 288

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 289 AIILDRMF 296


>gi|302537611|ref|ZP_07289953.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302446506|gb|EFL18322.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 304

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +    +  R L   +++L        L A+ + +   + PIL  +QS+P + ++  
Sbjct: 96  GTLLEVIWTSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQSLPSVAWVPP 155

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F                  I    V ++   +   +  IP       R+   +G +
Sbjct: 156 AVLWFGLNDAMMYT--------VILLGAVPSIANGLVSGIDQIPPLFLRAGRTLGATGLR 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W++ +P ++PG V  +    +  W  ++A+E+I     +      G  +       DL
Sbjct: 208 GAWHVVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNIDL 265

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             +  A++ +L V    D L+F P+  W  + R
Sbjct: 266 PGVFLAIILILVVGIAIDLLIFSPVERWVLRSR 298



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 90/228 (39%), Gaps = 12/228 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A+   W S+  +    T  +V++       ++ R ++  ++A  I  P+G+ +     + 
Sbjct: 81  ALSAVWDSLSEMWLKGTLLEVIW------TSVSRGLLGFLLALAIGTPLGLLVARVKFVR 134

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + I P  Q L + P+  + P  V          +  +  +++ G    I   +++G    
Sbjct: 135 AAIGPILQGLQSLPSVAWVPPAVLWFGL----NDAMMYTVILLGAVPSIANGLVSGIDQI 190

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  F     +   TG R   +++LP   P YV G       +W + + +E+ +       
Sbjct: 191 PPLFLRAGRTLGATGLRGAWHVVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASSPDLGL 250

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
               G  +         P V L ++++    +A++  ++ P+  +  R
Sbjct: 251 GL--GQLLENGRNNIDLPGVFLAIILILVVGIAIDLLIFSPVERWVLR 296


>gi|116496057|ref|YP_807791.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus casei ATCC 334]
 gi|116106207|gb|ABJ71349.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus casei ATCC 334]
          Length = 510

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L     +     L A++I+++     A       +   VL+ +  ++Q+IP L
Sbjct: 8   ISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             L AI A+    +  +  + Y  L +I    EE + +F 
Sbjct: 68  ALLGLLIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  +K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I
Sbjct: 120 MSRLRKLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D    L   L    +  ++  LL
Sbjct: 173 DRNDAALTLMGALAAALLAIVFSWLL 198



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+ +W+      ++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|311894739|dbj|BAJ27147.1| putative taurine ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 285

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 91/212 (42%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++ + +  R+      ++LF           R + +VL P +  ++++P L +L+  V
Sbjct: 87  LGEHLAASLRRIAQGTGWAVLFGTALGLAIGTLRPVAVVLEPAVTFLRTLPPLAYLSLLV 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E   ++ +  + +  +  +   ++  +P DL E +R+     W   
Sbjct: 147 IWFGID--------ESPKVWLLLIAALPPVAAATAAAVRGVPGDLLEAARALGAGRWSLL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +++   +  VVA+E I        +PGIG  I  A +      
Sbjct: 199 GGVVLPAALPEILTGVRIAVGVAYTSVVAAETI------NGVPGIGGMIRDAQRYNQTAV 252

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  ++T+     + D LL    R  + W  +
Sbjct: 253 VLAGIITIGLSGIVLDGLLKAVERLAVPWRGR 284



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+      A +    +G+ IG    ++  ++P    L   P   +  L+V     
Sbjct: 92  AASLRRIAQGTGWAVLFGTALGLAIGTLRPVAVVLEPAVTFLRTLPPLAYLSLLVIWFGI 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +P +WL L+             + G    P D  E A +     W     ++LP   
Sbjct: 152 -DESPKVWLLLIAALPPVAAATAAAVRGV---PGDLLEAARALGAGRWSLLGGVVLPAAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A+ + + +E  +         G+G  I ++        V+ G++ + 
Sbjct: 208 PEILTGVRIAVGVAYTSVVAAETING------VPGIGGMIRDAQRYNQTAVVLAGIITIG 261

Query: 564 CFVLALNRFL 573
              + L+  L
Sbjct: 262 LSGIVLDGLL 271


>gi|218700547|ref|YP_002408176.1| alkanesulfonate transporter permease subunit [Escherichia coli
           IAI39]
 gi|218370533|emb|CAR18340.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 263

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 89/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IGFSIGGSLGLILGLISGLSHWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 241 SAQLLERLWLRWNPTYHLKE 260



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  S     +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSHWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPTYHLKEAT 262


>gi|121603490|ref|YP_980819.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
 gi|120592459|gb|ABM35898.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas naphthalenivorans CJ2]
          Length = 287

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 90/228 (39%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + D +   L    L  +   +  R+  +++I      +       SR     + 
Sbjct: 69  LPPPAFVWDSLKDVLASGELLGHVGFSAARVAWSLLIGGSVGLLLGFGMGLSRTFKAYVF 128

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D++  +P+LG++   +++            E   + A+  + V  +  S    + NI
Sbjct: 129 PTFDVLAQLPVLGWIPLLIIFVGIE--------EALKVTAVSIAVVVPVALSTLSGIANI 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+ L EV R ++ S  Q    + +P + P L   +   +   W  V+  E++   +    
Sbjct: 181 PQALLEVGRVYQFSALQTIRRIVLPAAAPSLFTGLRQGVMQAWISVIFVELLSSSE---- 236

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             G+G ++A +     +  ++ AML +  V  + +   +L+   +  W
Sbjct: 237 --GLGFFMAYSRSLSQIDMVIVAMLAIGVVGIVIELGLRLIESRLQGW 282



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 79/212 (37%), Gaps = 13/212 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +  RV   ++I   + + +G  +G      + + P   +LA  P   + PL
Sbjct: 86  GELLGHVGFSAARVAWSLLIGGSVGLLLGFGMGLSRTFKAYVFPTFDVLAQLPVLGWIPL 145

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V          +S+ ++      +  + ++G +  P    EV   +  +  +  R 
Sbjct: 146 LIIFVGIEEALKVTAVSIAVVV----PVALSTLSGIANIPQALLEVGRVYQFSALQTIRR 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P   TG       AW + I  E+ S       + GLG ++A S        V+
Sbjct: 202 IVLPAAAPSLFTGLRQGVMQAWISVIFVELLS------SSEGLGFFMAYSRSLSQIDMVI 255

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLYGTRCL 585
           + +L +    + +    R +   L  +     
Sbjct: 256 VAMLAIGVVGIVIELGLRLIESRLQGWRRSAF 287


>gi|328545184|ref|YP_004305293.1| glycine betaine/l-proline transporter permease prow [polymorphum
           gilvum SL003B-26A1]
 gi|326414926|gb|ADZ71989.1| Glycine betaine/l-proline transport system permease protein prow
           [Polymorphum gilvum SL003B-26A1]
          Length = 282

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 16/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ +   L +GI+ +      V    + +      +  + T   ++ A  + +     
Sbjct: 54  LVVVVLATALAYGIRRSLSFPLFVLAALLLIINQGYWKETTETLALVVGASTVCMALGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   RL  VL PILD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 IGVAAAHRPRLYAVLRPILDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E   +F  +  Q  W + +P+++P ++  +  ++     
Sbjct: 171 -----IRLTRLGVASTPVQLLEAGHAFGATRSQLLWKVELPYALPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV + ++          G+G     A+   ++       + ++ V  + D+  FRP
Sbjct: 226 MVVIAALV-------GADGLGVPTLRALNTVNIARGFEVGVAIVLVAIVLDRF-FRP 274



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  VV    +   + +P+G+    RP + + ++P   L+   P  V+    +       
Sbjct: 96  TLALVVGASTVCMALGVPIGVAAAHRPRLYAVLRPILDLMQTIPTFVYLIPALILFGLGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G ++ P    E   +F  T  +    + LP   P 
Sbjct: 156 VPGLIATVIFAIPA---PIRL-TRLGVASTPVQLLEAGHAFGATRSQLLWKVELPYALPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG     +    +        + +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------ADGLGVPTLRALNTVNIARGFEVGVAIVLV 264

Query: 566 VLALNRFL 573
            + L+RF 
Sbjct: 265 AIVLDRFF 272


>gi|84515313|ref|ZP_01002675.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
 gi|84510596|gb|EAQ07051.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
          Length = 277

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 93/235 (39%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F+++     +     +    P  IV      L+     +   ++   +LSA V+ +    
Sbjct: 54  FIVIAVFAGLTWVMQRNWKTPLLIVLGFFFILNQGY-WRETMQSLTLVLSACVVCMGVGV 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA   +L   +VP+LD+MQ++P   +L   +V+F     G V G     IF +  
Sbjct: 113 PIGIAAAHRPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPA 169

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     Y  + + P  L E +++F  +  Q  + + +P + P ++  +  ++    
Sbjct: 170 P-----IRLTYLGVASTPTALLEAAQAFGATKRQILFKVELPSATPQIMAGLNQTIMLSL 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + ++          G+G  +  A+   +      +   ++ V  + D++L
Sbjct: 225 SMVVIAALV-------GASGLGVPVVRALNTVNTSLGFESGFVIVVVAIMLDRML 272



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 88/283 (31%), Gaps = 15/283 (5%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLG----VIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           + ++  +     +   +    + R LG    +I          +       +   +    
Sbjct: 1   MDWLTGTKIPVGAWAKSVFDAMNRNLGFVFDIISDAMEAMIDGILWTLETPHPFIVIAVF 60

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                 +   W++   IV  F +            ++  V+   ++   + +P+GI    
Sbjct: 61  AGLTWVMQRNWKTPLLIVLGFFFILNQGYWRETMQSLTLVLSACVVCMGVGVPIGIAAAH 120

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           RP +   + P   L+   P  V+    +       +   +   + ++      I      
Sbjct: 121 RPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA---PIRL-TYL 176

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G ++ P    E A +F  T  +    + LP   P  + G       + +  +++ +    
Sbjct: 177 GVASTPTALLEAAQAFGATKRQILFKVELPSATPQIMAGLNQTIMLSLSMVVIAALVG-- 234

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 +GLG  +  +    +         ++    + L+R L
Sbjct: 235 -----ASGLGVPVVRALNTVNTSLGFESGFVIVVVAIMLDRML 272


>gi|254518170|ref|ZP_05130226.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
 gi|226911919|gb|EEH97120.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
          Length = 248

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 89/236 (37%), Gaps = 22/236 (9%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------------ITMFRVVVLIIIA 397
            +     + + W  +  I+N F   + + VI                 ++FR+++ + I 
Sbjct: 10  YIYAISVVLVFWYLLHIILNSFVVPNPIDVIKKLFQVGFKVMSTHLVASLFRLLIALTIT 69

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             +   +G+ IG    I + I P   L    P   F P+ +      + +      +L+I
Sbjct: 70  ITLGYLIGLLIGINNKIDNLISPIVYLFFPVPRIAFLPVFMILFGLGNTSK----IVLII 125

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               + I+ +V  GA     +    A S  ++  +  ++I +P   P   T    A G +
Sbjct: 126 AIAIFQIIISVRDGAKEISKELILSAKSLKLSKAQMIKHIYIPATLPRLFTSLRIALGSS 185

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             A   +E       +    G+G YI  S  K  +  +  G++++    + + + +
Sbjct: 186 IAALFFAE------NYATKYGIGYYIMNSWIKVDYEGMYAGIILISLLGITMFKII 235



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 99/250 (39%), Gaps = 18/250 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           ++ VLV   +  ++        P D++  +   +    +  +   +  R+L A+ I++  
Sbjct: 14  ISVVLVFWYLLHIILNSFVVPNPIDVIKKL-FQVGFKVMSTHLVASLFRLLIALTITITL 72

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            ++   L   + ++  ++ PI+ +   +P + FL   ++ F      K        I  I
Sbjct: 73  GYLIGLLIGINNKIDNLISPIVYLFFPVPRIAFLPVFMILFGLGNTSK--------IVLI 124

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               ++ +  S+      I ++L   ++S +LS  Q   ++ +P ++P L  ++ +++  
Sbjct: 125 IAIAIFQIIISVRDGAKEISKELILSAKSLKLSKAQMIKHIYIPATLPRLFTSLRIALGS 184

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLL 259
               +  +E            GIG YI  +  + D   +   ++ +  +         +L
Sbjct: 185 SIAALFFAE------NYATKYGIGYYIMNSWIKVDYEGMYAGIILISLLGITMFKIIDIL 238

Query: 260 FRPMIVWSNK 269
              +  W +K
Sbjct: 239 QNRICKWESK 248


>gi|218531646|ref|YP_002422462.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218523949|gb|ACK84534.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 282

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 94/261 (36%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +   L         +  L   +    P D+            L +    +  R  
Sbjct: 34  KLLPWLLPTLVLAGWQAAASFGLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAA 93

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I       +      S     +    L ++++IP L  +   +++F          
Sbjct: 94  AGFLIGGGIGLSFGLANGLSNLSEKLTDTTLQMVRNIPHLSLIPLVILWFGID------- 146

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +     + +  +    + ++   L E+ R + ++  + FW + +P ++P + 
Sbjct: 147 -EGAKLFLVALGVFFPVYANTLHGIRSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIF 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  ++ A+L   G+  
Sbjct: 206 VGVRYALGIMWLTLIVAETISANS------GLGYMAMQAREFMLVDVVVLAILIYAGLGK 259

Query: 254 LYDQL---LFRPMIVWSNKFR 271
           + D L   L R  + W+  +R
Sbjct: 260 IADSLTRALERTCLSWNPAYR 280



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 82/289 (28%), Gaps = 31/289 (10%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R+L                  R+     + W      +A   A  S G +   F  
Sbjct: 4   SAAIRSLPGRAQRAKAAAPLQRKPLRLPTGKLLPWLLPTLVLAGWQAAASFGLVSTRFMP 63

Query: 374 Q--DVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
              DV    W             ++  R     +I   I +  G+  G            
Sbjct: 64  APLDVAAAGWRLAQTGELWENLWVSFARAAAGFLIGGGIGLSFGLANGLSNLSEKLTDTT 123

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            Q++   P     PLV+                L+  G  + +  N + G  +      E
Sbjct: 124 LQMVRNIPHLSLIPLVILWFGI----DEGAKLFLVALGVFFPVYANTLHGIRSVDPQLIE 179

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +   + +     +  ++LPG  P    G   A G  W   IV+E  S        +GLG 
Sbjct: 180 MGRVYGMNRRELFWRVVLPGALPSIFVGVRYALGIMWLTLIVAETIS------ANSGLGY 233

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYLYG 581
              ++ E      VVL +LI        +            W+P Y   
Sbjct: 234 MAMQAREFMLVDVVVLAILIYAGLGKIADSLTRALERTCLSWNPAYRNA 282


>gi|91781639|ref|YP_556845.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91685593|gb|ABE28793.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 289

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 98/292 (33%), Gaps = 31/292 (10%)

Query: 308 PLSNNVKKLCRTLGVIR-FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           PL+   K+  RT   +R +  P        +      L   W+     +A  + W    +
Sbjct: 12  PLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWW-----LATHLHWLPPLF 66

Query: 367 IVNHFTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +             W G I            +  RV     +A++  +PVGI +G     
Sbjct: 67  LPTPEAVWAAFIDAWHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVA 126

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  +     P   + PLVV               +++       I     AG  +
Sbjct: 127 RGLLDPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIYLACFAPIAMAARAGVRS 182

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              +    A S   +  +  R+++LP   P  +TG   A G  W   + +E+ +      
Sbjct: 183 ATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ 236

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
            T GLG  +  ++       VV+G++++       +   R L   L  +  R
Sbjct: 237 ATAGLGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGR 288



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++ + + LR+  A  ++ +       L   SR    +L P L+  + +P L +L   V
Sbjct: 91  LSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   S  Q  
Sbjct: 151 IWFGID--------ETAKIVVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGSFSQIV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 256

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + + +D   + L R ++ W  +
Sbjct: 257 VVMGIVLIGLIAWFFDLGMRALERRLVPWKGR 288


>gi|282898775|ref|ZP_06306762.1| hypothetical protein CRC_00066 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196302|gb|EFA71212.1| hypothetical protein CRC_00066 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 269

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 15/243 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRV 390
           N+ +     + +F +   +A+      +       T Q ++  ++ G        T+ R 
Sbjct: 23  NRCLPLTGVLLFFGLWWFIAVSGFVNPVLLPTPLATVQTLIEGLFGGSMFSDLATTVLRT 82

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                +A++  IP+G+ +G    I   ++   +   + PA+   PL +        +  +
Sbjct: 83  FSAFFLATLFGIPLGVGLGSSEKIYRSVEFLIEFFRSTPASALIPLFILFFGISDFSKVV 142

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             S    F     I+FN   G           A       W+ ++ ++L    P    G 
Sbjct: 143 IAS----FSAFLLIVFNSAYGVIHAKQSRILAARVMGANRWQIFKDVLLLESLPQTFIGL 198

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +    A    IVSE+           GLG  I ++ +  +  ++   +LI       LN
Sbjct: 199 RSGISIALVIVIVSEMFIGSQQ-----GLGKRIIDAQQILNVRDMYASILITGSLGYLLN 253

Query: 571 RFL 573
              
Sbjct: 254 MLF 256



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F L  F+ V G +N +L        P   V  +   L   S+    + T LR  SA  +
Sbjct: 34  FFGLWWFIAVSGFVNPVL-----LPTPLATVQTLIEGLFGGSMFSDLATTVLRTFSAFFL 88

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + LF          S ++   +  +++  +S P    +   +++F      KV+ A  +A
Sbjct: 89  ATLFGIPLGVGLGSSEKIYRSVEFLIEFFRSTPASALIPLFILFFGISDFSKVVIASFSA 148

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I         F+    + +  +     +R    + WQ F  + +  S+P     +  
Sbjct: 149 FLLI--------VFNSAYGVIHAKQSRILAARVMGANRWQIFKDVLLLESLPQTFIGLRS 200

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S     V+ SEM +         G+G  I  A +  ++  +  ++L    + +L + L
Sbjct: 201 GISIALVIVIVSEMFIGSQQ-----GLGKRIIDAQQILNVRDMYASILITGSLGYLLNML 255

Query: 259 LF---RPMIVWSNK 269
                + +I WS K
Sbjct: 256 FLGLEKRLIHWSGK 269


>gi|75674880|ref|YP_317301.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419750|gb|ABA03949.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 268

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 10/246 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G  ++  P     +      + +L     C    V   +       ++  +       ++
Sbjct: 9   GDRKWRLPRLDGVVQWLLPAAILLVWQVACSTGYVPARVLPAPTEVVLAGWKSLQSGELV 68

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               ++ +R VV  +I   I    G+  G  P          Q++   P     PLV+  
Sbjct: 69  QNIWVSFWRAVVGFLIGGGIGFAFGLANGLSPFSDKLTDTTLQMIRNVPHLALIPLVILW 128

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L+  G  + +  N + G         E+   + +     +R +I P
Sbjct: 129 FGIEEA----AKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMNSGELFRRVIFP 184

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P    G   + G  W   IV+E  +       ++GLG    ++ E      VVL +L
Sbjct: 185 GALPSIFVGVRFSLGIMWLTLIVAETIA------SSSGLGYMAMQAREFMLIDVVVLSIL 238

Query: 561 IMCCFV 566
           I     
Sbjct: 239 IYALLG 244



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 92/253 (36%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            A +LV  +     +   +    P ++V     +L    L Q    +  R +   +I   
Sbjct: 28  AAILLVWQVACSTGYVPARVLPAPTEVVLAGWKSLQSGELVQNIWVSFWRAVVGFLIGGG 87

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F +      S     +    L +++++P L  +   +++F           E A +F 
Sbjct: 88  IGFAFGLANGLSPFSDKLTDTTLQMIRNVPHLALIPLVILWFGIE--------EAAKLFL 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    +  +   L E+ R + ++  + F  +  P ++P +   +  S+ 
Sbjct: 140 VALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMNSGELFRRVIFPGALPSIFVGVRFSLG 199

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          G+G     A +   +  ++ ++L    +  + D   + 
Sbjct: 200 IMWLTLIVAETIASSS------GLGYMAMQAREFMLIDVVVLSILIYALLGKVADSASRF 253

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   F+
Sbjct: 254 LERITLSWHPAFQ 266


>gi|89900565|ref|YP_523036.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
 gi|89345302|gb|ABD69505.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
          Length = 294

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 22/264 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLY 378
           G      P  + ++ +  R  +   + W   V  +A+     S+G++         +V+ 
Sbjct: 23  GPTLAGNPFPWHKVATTLRAVWQRLLPWLVPVGLIALWQIASSLGWLSTRVLPAPLEVIT 82

Query: 379 VIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
             W             ++  R +  + +   + + +G+  G      + +    Q++   
Sbjct: 83  AFWTLTASGELWTHVQVSAARALSGLAVGGGLGLVLGLLTGSSRLAETLLDSTIQMVRNI 142

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PLV+                L+     + I  N   G         E+  ++ +
Sbjct: 143 PALALIPLVILWFGI----DETAKLFLIAVSVFFPIYLNTFHGIRGVDPGLIEMGRTYGL 198

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W+ +  IILPG     + G   + G  W   IV+E  S         G+G     + E
Sbjct: 199 NRWQLYTQIILPGALSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNARE 252

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
                 V++G+L+        + F
Sbjct: 253 FLQTDIVLVGILLYALLGKLADVF 276



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 99/263 (37%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+ P     +  + +  I + L     +    P +++           L  +   +  R
Sbjct: 45  QRLLP-WLVPVGLIALWQIASSLGWLSTRVLPAPLEVITAFWTLTASGELWTHVQVSAAR 103

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS + +      V   L   SR    +L   + ++++IP L  +   +++F        
Sbjct: 104 ALSGLAVGGGLGLVLGLLTGSSRLAETLLDSTIQMVRNIPALALIPLVILWFGID----- 158

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F I  S  + +  + +  +  +   L E+ R++ L+ WQ +  + +P ++  
Sbjct: 159 ---ETAKLFLIAVSVFFPIYLNTFHGIRGVDPGLIEMGRTYGLNRWQLYTQIILPGALSS 215

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E I          GIG     A +      +L  +L    +
Sbjct: 216 ILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDIVLVGILLYALL 269

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             L D     L R  + W   ++
Sbjct: 270 GKLADVFAKGLERYWLRWHPGYQ 292


>gi|186471960|ref|YP_001863278.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184198269|gb|ACC76232.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 299

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L AF     +  + +        P D+       +   +L +  S +  R  S  VI   
Sbjct: 54  LAAFASWWIVSALHVVKSGLLVSPVDVAHTAWQQIQSGALLRALSASLAREASGFVIGTA 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 114 GGLLLGAALGFSRIATRLIGPTFDTFKQISLFAWIPLISVWFGLGDMAKVVFLSLAALLP 173

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +P    EV+R+FR S  Q   ++ +P ++P +   + +++ 
Sbjct: 174 VAAHTC--------DGIHAVPPRYVEVARAFRYSRIQMARHVILPAALPSIFTGIYLALI 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +       + L
Sbjct: 226 YSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLFGIIVVGFTGSALNAL 277



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 27/286 (9%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI---- 367
            +    +  G           +  S      +  I W   V  +A   +W  +  +    
Sbjct: 11  RIFAPRKAGGPPPCSCDVPVKRPLSAAVRKRLSAINWRGFVLPLAAFASWWIVSALHVVK 70

Query: 368 ---------VNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                    V H  +Q +    ++     ++ R     +I +   + +G  +GF    + 
Sbjct: 71  SGLLVSPVDVAHTAWQQIQSGALLRALSASLAREASGFVIGTAGGLLLGAALGFSRIATR 130

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I P            + PL+        +   ++LS          +  +   G  A P
Sbjct: 131 LIGPTFDTFKQISLFAWIPLISVWFGLGDMAKVVFLS----LAALLPVAAHTCDGIHAVP 186

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             + EVA +F  +  +  R++ILP   P   TG   A   +W A++ +E        +  
Sbjct: 187 PRYVEVARAFRYSRIQMARHVILPAALPSIFTGIYLALIYSWLATLGAEYLL-----VAG 241

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYL 579
           +G+G  + + +E+     V+ G++++     ALN   R +   L+ 
Sbjct: 242 SGIGNTLIDGSEQFRMDLVLFGIIVVGFTGSALNALARSIERRLFA 287


>gi|326796543|ref|YP_004314363.1| choline ABC transporter permease [Marinomonas mediterranea MMB-1]
 gi|326547307|gb|ADZ92527.1| choline ABC transporter, permease protein [Marinomonas mediterranea
           MMB-1]
          Length = 281

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 99/243 (40%), Gaps = 15/243 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
             ++F+ +  + +I +I +    +  +      +    + +          +T + ++SA
Sbjct: 44  LVDVFEWIPPLALIAMIAVGAWFLHRSVGLVVFIVAALLLIINLGYWLETIQTLVLVVSA 103

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             +S+L        AA    L  +L P+LD+MQ+IP   +L  T++ F     G V G  
Sbjct: 104 TFVSVLIGVPIGIAAAHRPWLYTILRPVLDLMQTIPTFVYLIPTLILFGL---GYVPGLI 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              IFAI            Y  +  +P +L E   +F  +  +  + + +P +MP ++  
Sbjct: 161 STIIFAIAAP-----IRLTYLGVSKVPSELLEAGLAFGCTKSKLLYRVELPAAMPSIMAG 215

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +   +      VV + ++          G+G  +  A+   ++     A + ++ V  + 
Sbjct: 216 VTQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNISQGFEAGVAIVLVAIIL 268

Query: 256 DQL 258
           D++
Sbjct: 269 DRI 271



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 77/229 (33%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +     V    +  +   + +IV        L        T+  VV    ++ +I +P
Sbjct: 54  LALIAMIAVGAWFLHRSVGLVVFIVAALLLIINLGYWLETIQTLVLVVSATFVSVLIGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP + + ++P   L+   P  V+    +      ++   +   +  I      
Sbjct: 114 IGIAAAHRPWLYTILRPVLDLMQTIPTFVYLIPTLILFGLGYVPGLISTIIFAIAA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S  P++  E   +F  T  +    + LP   P  + G       + +  ++
Sbjct: 171 IRL-TYLGVSKVPSELLEAGLAFGCTKSKLLYRVELPAAMPSIMAGVTQCIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +  +    +  +     + +    + L+R 
Sbjct: 230 AALVG-------ADGLGKPVVRALNTVNISQGFEAGVAIVLVAIILDRI 271


>gi|269128860|ref|YP_003302230.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268313818|gb|ACZ00193.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 274

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 9/176 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R++    IAS+I I VG+ IG    +    +P      A P     P+ V       
Sbjct: 68  SVLRLLTGWAIASLIGITVGLAIGRIRWLGEMFEPALHFARAIPPTALAPMWVVLFEVG- 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   + + FG  W +L N I GA +      + A  + +   +  RY+I+P   P 
Sbjct: 127 ---TPMQLVTIAFGVVWPVLLNTIDGARSVEPVQYDTALIYRLGPLQRVRYLIIPSAAPK 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
              G   + G A    +VSE+         +      + ++      P +  G+ +
Sbjct: 184 IFAGLRVSLGLAVILMVVSEMTGSVDGIAFS-----LLLDAQRNYDMPAMWAGICV 234



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 14/200 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + LR+L+   I+ L          + R LG +  P L   ++IP        VV F    
Sbjct: 68  SVLRLLTGWAIASLIGITVGLAIGRIRWLGEMFEPALHFARAIPPTALAPMWVVLFEVGT 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P ++          I    VW +  +      ++     + +  +RL   Q+  YL +P 
Sbjct: 128 PMQL--------VTIAFGVVWPVLLNTIDGARSVEPVQYDTALIYRLGPLQRVRYLIIPS 179

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + +S+      +V SEM         + GI   + L  +    +  ++A + 
Sbjct: 180 AAPKIFAGLRVSLGLAVILMVVSEM------TGSVDGIAFSLLLDAQRNYDMPAMWAGIC 233

Query: 248 MLGVIFLYDQLLFRPMIVWS 267
           +LG +     L       W+
Sbjct: 234 VLGALGYLLALALGRCERWA 253


>gi|218512691|ref|ZP_03509531.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli 8C-3]
          Length = 283

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 74/186 (39%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR++V  +IA    IP+G+ +G        +    +     P   + PL++  +  
Sbjct: 90  AASLFRIIVAALIAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGI 149

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++      I  +  AG  + P +    A S   +  + +  I+LP   
Sbjct: 150 GETSK----ITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGASRLQLFIDIVLPSAL 205

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T G+G  I  +++  +   V +G+ I+ 
Sbjct: 206 PEILTGIRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIAIIA 259

Query: 564 CFVLAL 569
                 
Sbjct: 260 VCAFTF 265



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL ++ + +  R++ A +I++        L   +R    VL   ++    +P L +L  
Sbjct: 83  ASLSEHVAASLFRIIVAALIAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPL 142

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +  +    +  S    + ++P +    +RS   S  Q
Sbjct: 143 MIIWLGIG--------ETSKITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGASRLQ 194

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + +++  GW  +VA+E+I          GIG  I  A +    
Sbjct: 195 LFIDIVLPSALPEILTGIRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLAT 248

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             +   +  +    F +    + L   ++ W  K
Sbjct: 249 DVVFVGIAIIAVCAFTFSAAIRFLKTYLVPWKGK 282


>gi|90418329|ref|ZP_01226241.1| permease protein ABC-type glycine/betaine/proline transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90338001|gb|EAS51652.1| permease protein ABC-type glycine/betaine/proline transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 282

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L++  + +L        AA+   L  +L PILD+MQ+IP   +L   ++
Sbjct: 92  WEETTETLALVLASTAVCMLIGVPVGVAAARREWLYAILRPILDLMQTIPTFVYLIPALI 151

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFA+ +             + + PR L E   +F  +  Q+  
Sbjct: 152 LFGL---GLVPGLVATVIFALPSP-----IRLTRLGIASTPRQLLEAGDAFGATPMQRLM 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++         PG+G  +  A+   ++   
Sbjct: 204 TIEIPYALPQIMAGLTQTIMLSLSMVVIAALV-------GAPGLGVPVLRALNTINIGQG 256

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ +  + D+  
Sbjct: 257 FEAGLAIVLLAIILDRFF 274



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  +I +PVG+    R  + + ++P   L+   P  V+    +  +  + 
Sbjct: 98  TLALVLASTAVCMLIGVPVGVAAARREWLYAILRPILDLMQTIPTFVYL---IPALILFG 154

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     L   +IF     I      G ++ P    E   +F  T  +    I +P   P 
Sbjct: 155 LGLVPGLVATVIFALPSPIRL-TRLGIASTPRQLLEAGDAFGATPMQRLMTIEIPYALPQ 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +  +     L +   
Sbjct: 214 IMAGLTQTIMLSLSMVVIAALVG-------APGLGVPVLRALNTINIGQGFEAGLAIVLL 266

Query: 566 VLALNRFL 573
            + L+RF 
Sbjct: 267 AIILDRFF 274


>gi|300783467|ref|YP_003763758.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299792981|gb|ADJ43356.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 315

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 92/279 (32%), Gaps = 12/279 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + L      L      +    P  + +            +    V   +     W     
Sbjct: 31  ADLDAVGAGLDSLDAPLGDRRPGFWKRFAWGFLPPLGAVVVLVVVWQILWAAAFWPESQL 90

Query: 367 IVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                 + +   ++  G +      ++ R  +  +   +I  P+G+ +     + + I P
Sbjct: 91  PSPAAVWGEFRSIVVDGKVFGFVWTSVHRAALGFLAGVLIGTPLGLVVAKVRVVRAAIGP 150

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L + P+  + P  +          +  +  +++ G+   I   +++G    P    
Sbjct: 151 LLTGLQSLPSVAWVPAAILWFGI----NDAAIYFVVLLGSVPSIANGLVSGIDQIPPILP 206

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V            R+I+LP   P ++ G       +W + + +E+ +         GLG
Sbjct: 207 RVGQVMGANRLSSARHILLPAALPGFLAGLKQGWAFSWRSLMAAELIALSPQLGI--GLG 264

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           AY+ + +   S   V+  + ++    + +   ++ PL  
Sbjct: 265 AYLNQGSSFNSMETVIAAIFLILLVGVGIELLVFRPLER 303



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 103/267 (38%), Gaps = 14/267 (5%)

Query: 3   LYNILPPFISR---RIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDV 58
           L +  P F  R      P +  ++  V+V  I+         +   P  +       +  
Sbjct: 47  LGDRRPGFWKRFAWGFLPPLGAVVVLVVVWQILWAAAFWPESQLPSPAAVWGEFRSIVVD 106

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +  +   +  R     +  +L       + AK R +   + P+L  +QS+P + ++  
Sbjct: 107 GKVFGFVWTSVHRAALGFLAGVLIGTPLGLVVAKVRVVRAAIGPLLTGLQSLPSVAWVPA 166

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           + A  F +    V ++   +   +  IP  L  V +    +   
Sbjct: 167 AILWFGIN--------DAAIYFVVLLGSVPSIANGLVSGIDQIPPILPRVGQVMGANRLS 218

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++PG +  +    +  W  ++A+E+I +   +    G+G+Y+        +
Sbjct: 219 SARHILLPAALPGFLAGLKQGWAFSWRSLMAAELIALSPQLGI--GLGAYLNQGSSFNSM 276

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
             ++ A+  +L V    + L+FRP+  
Sbjct: 277 ETVIAAIFLILLVGVGIELLVFRPLER 303


>gi|262203295|ref|YP_003274503.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262086642|gb|ACY22610.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 280

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 11/210 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +  R  + + +A I+ + +G+ +G      + + P  Q + A P     PL
Sbjct: 81  GQLVDAIGASAQRAAIGLAVAVIVGVGLGVLVGLNRLSDAVVDPNMQAIRALPLFGLIPL 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +           +   LL+  G    +  N             E A     +     R 
Sbjct: 141 FILWFGIG----EVPKVLLVALGAMLPLYLNTSGAIRQIDRRLVETARVLGFSRITTIRE 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  + G   A   AW + IV+E  +       T+GLG  I  + +     +V+
Sbjct: 197 LIIPAAMPQILVGLRQALAIAWLSLIVAEQIA------ATSGLGYLINNARDFLRIDQVI 250

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            G+++     L  +  +   L  Y TR  R
Sbjct: 251 FGLIVYAAMGLITDAIV-RALERYTTRYRR 279



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 96/250 (38%), Gaps = 16/250 (6%)

Query: 23  LAFVLVIGI-INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA +++  +   + +    +   P  I       L    L      +  R    + ++++
Sbjct: 44  LAVLVLWQVGSALGILPQDKLPAPSLIAQAGWELLVDGQLVDAIGASAQRAAIGLAVAVI 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   +R    V+ P +  ++++P+ G +   +++F           E+  +  
Sbjct: 104 VGVGLGVLVGLNRLSDAVVDPNMQAIRALPLFGLIPLFILWFGIG--------EVPKVLL 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +  +   ++  I R L E +R    S       L +P +MP ++  +  +++
Sbjct: 156 VALGAMLPLYLNTSGAIRQIDRRLVETARVLGFSRITTIRELIIPAAMPQILVGLRQALA 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ +E I          G+G  I  A     +  +++ ++    +  + D ++ R
Sbjct: 216 IAWLSLIVAEQIA------ATSGLGYLINNARDFLRIDQVIFGLIVYAAMGLITDAIV-R 268

Query: 262 PMIVWSNKFR 271
            +  ++ ++R
Sbjct: 269 ALERYTTRYR 278


>gi|222106512|ref|YP_002547303.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
 gi|221737691|gb|ACM38587.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
          Length = 284

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 86/289 (29%), Gaps = 25/289 (8%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L  +          +   +    L   +   + + L +         +     Q      
Sbjct: 6   LRPDAGHAPSLAPSLGLAWFRAGLSRLAGNSIGWALPLLILIAWEASSRAGLLQQNVLPA 65

Query: 369 NHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                +    +   G       ++  R +    I   I   +G+  G             
Sbjct: 66  PSAVAEAFWRLTLSGELPTNIGVSTVRALAGFAIGGGIGFALGLLNGLSALSRGITDTTL 125

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           Q++   P     PLV+                L+  G  + I  N + G  +      E+
Sbjct: 126 QMVRNIPHLALIPLVILWFGI----DEEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEM 181

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
              + +  +R +R +ILPG  P    G     G  W   IV+E  +       ++GLG  
Sbjct: 182 GRLYGMKPYRLFRKVILPGALPAIFAGLRYGLGIMWLTLIVAETIA------ASSGLGYM 235

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFL------WHPLYLYGT 582
             ++ E      VVL +LI        +   RFL      WHP Y    
Sbjct: 236 AMQAREFLLIDVVVLSILIYALLGKLADLLARFLERVFLQWHPAYQTAR 284



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +          LP     +T+R L+   I     F    L   S     +  
Sbjct: 63  LPAPSAVAEAFWRLTLSGELPTNIGVSTVRALAGFAIGGGIGFALGLLNGLSALSRGITD 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP L  +   +++F           E A +F +     + +  +    + ++
Sbjct: 123 TTLQMVRNIPHLALIPLVILWFGID--------EEAKLFLVALGVFFPIYVNTLLGIQSV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R + +  ++ F  + +P ++P +   +   +   W  ++ +E I        
Sbjct: 175 DPQLVEMGRLYGMKPYRLFRKVILPGALPAIFAGLRYGLGIMWLTLIVAETIAASS---- 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
             G+G     A +   +  ++ ++L    +  L D   + L R  + W   ++
Sbjct: 231 --GLGYMAMQAREFLLIDVVVLSILIYALLGKLADLLARFLERVFLQWHPAYQ 281


>gi|115358427|ref|YP_775565.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115283715|gb|ABI89231.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 363

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 90/289 (31%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++  + F+  +  +  L      +    P    +L   +     L      + 
Sbjct: 69  RVVGFTDWAYTDTFATAAWTIAALLLIAATLGHRVPATRARLARVRPAGPWLVALPLVLA 128

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 129 AWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLKLLALGFAYGVAVGFAVG 188

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 189 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS----AAAFLIALSTGFPVA 244

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 245 VLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 304

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 305 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 347



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A  T  
Sbjct: 112 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLK 171

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 172 LLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 224

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  S  + +    +  + ++ R   +V+R+   +       + +P ++P
Sbjct: 225 -PTSYSAAAFLIALSTGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALP 283

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 284 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 337

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 338 LFSGLIALLF 347


>gi|303256366|ref|ZP_07342380.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|331001510|ref|ZP_08325128.1| putative aliphatic sulfonates transport permease protein SsuC
           [Parasutterella excrementihominis YIT 11859]
 gi|302859857|gb|EFL82934.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329568239|gb|EGG50056.1| putative aliphatic sulfonates transport permease protein SsuC
           [Parasutterella excrementihominis YIT 11859]
          Length = 259

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 89/249 (35%), Gaps = 20/249 (8%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              +LV G ++      +     P  +       L    L ++ + +  R+     +++L
Sbjct: 21  AILLLVWGAVSHFGLFPEFLLPSPEKVWSSFVELLVCGELWKHIAASAGRVFGGFFLAML 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA-ELAAIF 140
                A     S         +L+ ++         F     +       +G  E A + 
Sbjct: 81  VAIPLAYFFYYSPASEKRAKLLLEALR---------FIPPLSLIPLLILWLGIGEAAKLS 131

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F +  + +  +++     I +  +E++   RL+  ++F ++  P S+P +   + +  
Sbjct: 132 IVFLASFFPIYLNVFSGFKQIDKSYKELAFMLRLNRMERFKHIEFPASLPNIFTGLRLGF 191

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---Q 257
              W  +V +E+I          G+G  I  A +      +   +L +  +  L D   Q
Sbjct: 192 GYSWRALVGAELIAASS------GLGYLIGDASEMSRTDKVFVGILCIAVLGVLGDQLFQ 245

Query: 258 LLFRPMIVW 266
           L  + +  W
Sbjct: 246 LFGKRLTPW 254



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  RV     +A ++ IP+  +  + P    + +   + L   P     PL++  +  
Sbjct: 65  AASAGRVFGGFFLAMLVAIPLAYFFYYSPASEKRAKLLLEALRFIPPLSLIPLLILWLGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++   + + I  NV +G       +KE+A    +     +++I  P   
Sbjct: 125 GEAAKLS----IVFLASFFPIYLNVFSGFKQIDKSYKELAFMLRLNRMERFKHIEFPASL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G +W A + +E+ +       ++GLG  I +++E     +V +G+L + 
Sbjct: 181 PNIFTGLRLGFGYSWRALVGAELIA------ASSGLGYLIGDASEMSRTDKVFVGILCIA 234

Query: 564 CFVLALNRFL 573
              +  ++  
Sbjct: 235 VLGVLGDQLF 244


>gi|269302814|gb|ACZ32914.1| ABC transporter, permease protein [Chlamydophila pneumoniae LPCoLN]
          Length = 591

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 82/216 (37%), Gaps = 16/216 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I      +L +  L   A  T   +L    +++  + V AT+    +    +L P
Sbjct: 34  PPPSSIASSTLQSLPL--LLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQP 91

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++Q  P+       V++F             A I     +  + +T ++YQ + + P
Sbjct: 92  LFILLQCTPMFALAPLIVLWFGWGIG--------AVIVPTALTIFFPLTLTIYQGILSTP 143

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +L E       + +Q    L +P ++P +   + +++    F  +A E +         
Sbjct: 144 DELIEQFVLCGATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQ 197

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  +  + +  ++   L  + T+  +     Q+
Sbjct: 198 SGLGILMLESRRNYEMELALAGLATLSILTLSLFQI 233



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +   T Q +  ++     T+  ++    +A  + I +   +         +QP   LL  
Sbjct: 39  IASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIMLSYKSAKDLLQPLFILLQC 98

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V    +      +  +L + F     +   +  G  + P++  E      
Sbjct: 99  TPMFALAPLIVLWFGWGIGAVIVPTALTIFF----PLTLTIYQGILSTPDELIEQFVLCG 154

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T ++    + +P   P+  +G   A G A  A+I  E  +        +GLG  + ES 
Sbjct: 155 ATKFQLLIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVA------SQSGLGILMLESR 208

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                   + G+  +    L+L
Sbjct: 209 RNYEMELALAGLATLSILTLSL 230


>gi|297171487|gb|ADI22487.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF0500_07A21]
          Length = 709

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 95/234 (40%), Gaps = 18/234 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VLVI ++    +G     +         + LD   +   A  T   M  ++ IS++   
Sbjct: 100 IVLVILVLPAFAYGGLRLGLLAVFAVGSWLVLD---MWDSAMETLSLMCISIAISVMIGV 156

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           ++  +A++S R   ++ PILD MQ++P   +L      F    PG        A+ A   
Sbjct: 157 LFGIVASQSDRFETIIKPILDTMQTLPAFIYLIPAFYLFGLGAPG--------ALLATVI 208

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +       +  +P  ++E + SF  +  Q    + +P +MP +   +  ++    
Sbjct: 209 YALPPVVRLTNLGIRQVPAGIDEAATSFGATKIQSLVKVKIPMAMPAIKLGINQTVMMAL 268

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV +       T I  PG+G  +   ++  ++   L   + ++ +  + D++
Sbjct: 269 ALVVLA-------TFIAAPGLGDIVFRGMQRLNVGKALEGGVAIVLMAIVLDRV 315



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 15/181 (8%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I  +       LAA +R +  +L P+LD MQ++P+  +L   ++ F         G ++ 
Sbjct: 529 ICFIVGVPLGILAAYNRTVDALLKPVLDTMQTMPVFVYLVPVIMLFG--------GGQIP 580

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A     +  +       +  +P ++ EVS SF  S  Q    + +P ++P ++  + 
Sbjct: 581 AVIATVIYALPPLVRCTTLGIRELPEEINEVSSSFGASTTQTLIKIKIPMAIPAIMVGIN 640

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             +       V + +I          G+G  +   +        L A + ++ +  + D+
Sbjct: 641 QGIMMALAMEVITPLIGG-------KGLGLDVFTGMNTASFGLSLQAGIGIVMLAIILDR 693

Query: 258 L 258
           +
Sbjct: 694 I 694



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 68/228 (29%), Gaps = 11/228 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             I    +V         +     V       VL +      T+  + + I I+ +I + 
Sbjct: 98  WQIVLVILVLPAFAYGGLRLGLLAVFAVGSWLVLDMWDSAMETLSLMCISIAISVMIGVL 157

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
            GI         + I+P    +   PA ++                L   +         
Sbjct: 158 FGIVASQSDRFETIIKPILDTMQTLPAFIYLIPAFYLFGLGAPGALLATVIY----ALPP 213

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P    E A+SF  T  +    + +P   P    G       A    ++
Sbjct: 214 VVRLTNLGIRQVPAGIDEAATSFGATKIQSLVKVKIPMAMPAIKLGINQTVMMALALVVL 273

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +   +         GLG  +    ++ +  + + G + +    + L+R
Sbjct: 274 ATFIA-------APGLGDIVFRGMQRLNVGKALEGGVAIVLMAIVLDR 314



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 14/229 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           +W+  +    +       G  +     F +     +  LG  T+  V V ++I  I+ +P
Sbjct: 477 WWYTSLIFTCVAFLISGRGLAIATAIGFLFIGATDLWILGMTTLTTVTVSVLICFIVGVP 536

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI   +   + + ++P    +   P  V+   V+           +   +  +      
Sbjct: 537 LGILAAYNRTVDALLKPVLDTMQTMPVFVYLVPVIMLFGGGQ----IPAVIATVIYALPP 592

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G    P +  EV+SSF  +  +    I +P   P  + G       A    ++
Sbjct: 593 LVRCTTLGIRELPEEINEVSSSFGASTTQTLIKIKIPMAIPAIMVGINQGIMMALAMEVI 652

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +           GLG  +       SF   +   + +    + L+R 
Sbjct: 653 TPLIGG-------KGLGLDVFTGMNTASFGLSLQAGIGIVMLAIILDRI 694


>gi|317485695|ref|ZP_07944566.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316923060|gb|EFV44275.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 264

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +      ++    +  +++ ++ IP+G+ +G+   +    +P  +L+   P   +
Sbjct: 62  PDGAIMATHAWTSIQEAFIGYVLSLVVGIPLGLAMGWFNVVEGLFRPIFELIRPIPPIAW 121

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V                ++        + N   G         ++A ++    W+ 
Sbjct: 122 IPLTVFWFGIGLAGK----VFIIWIAGIVPCVINSYVGVRMTNPTLIQMARTYGANNWQI 177

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + +P   P        A    W   + +E+ +        +GLG  I      G   
Sbjct: 178 FTQLCIPSALPMVFGALQLALAYCWTNLVAAELLA------ADSGLGFLITMGGRLGRPD 231

Query: 554 EVVLGVLIMCCFVLAL 569
            +VLG++ +      +
Sbjct: 232 IIVLGMICVGLSGAVI 247



 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 86/206 (41%), Gaps = 18/206 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   +  +A  +        V+SL+              +  +  PI ++++ IP + ++
Sbjct: 63  DGAIMATHAWTSIQEAFIGYVLSLVVGIPLGLAMGWFNVVEGLFRPIFELIRPIPPIAWI 122

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             TV +F     GK        +F I+ + +     + Y  +      L +++R++  + 
Sbjct: 123 PLTVFWFGIGLAGK--------VFIIWIAGIVPCVINSYVGVRMTNPTLIQMARTYGANN 174

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ F  L +P ++P +   + ++++  W  +VA+E++          G+G  I +  +  
Sbjct: 175 WQIFTQLCIPSALPMVFGALQLALAYCWTNLVAAELLAADS------GLGFLITMGGRLG 228

Query: 237 DLLAILYAMLTML----GVIFLYDQL 258
               I+  M+ +      + F+ DQ+
Sbjct: 229 RPDIIVLGMICVGLSGAVIGFIIDQI 254


>gi|302555439|ref|ZP_07307781.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302473057|gb|EFL36150.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 287

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 17/231 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +    P  I       ++   L    + +  R L  +VI +    ++A ++  SR    
Sbjct: 65  ARSLPAPWTIAVAAGDLIEDGRLQSNLATSAQRALLGLVIGVAGGLLFAMVSGLSRVGEA 124

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++   + I ++IP L  +   +++F           E   +  I       +    +  L
Sbjct: 125 LIDGPVQIKRAIPSLALIPLLILWFGIG--------ETMKVVTIALGVFVPIYIHTHNGL 176

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             I     E++ + RLS  Q   ++ +P ++PG +  M  +++  W  +V  E +     
Sbjct: 177 RGIDNRYAELAETVRLSRPQFVRHVVLPGALPGFLLGMRFAVTAAWLALVVVEQV----- 231

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                GIG  + LA     +  IL  ++    +    D   +L+ R  + W
Sbjct: 232 -NATSGIGYMMELARTYGQIDIILVGLVVYGLLGLFSDALVRLVERRTLTW 281



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  R ++ ++I     +   +  G      + I    Q+  A P+    PL++     
Sbjct: 92  ATSAQRALLGLVIGVAGGLLFAMVSGLSRVGEALIDGPVQIKRAIPSLALIPLLILWFGI 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     + +  G    I  +   G     N + E+A +  ++  ++ R+++LPG  
Sbjct: 152 GET----MKVVTIALGVFVPIYIHTHNGLRGIDNRYAELAETVRLSRPQFVRHVVLPGAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++ G   A   AW A +V E  +       T+G+G  +  +   G    +++G+++  
Sbjct: 208 PGFLLGMRFAVTAAWLALVVVEQVN------ATSGIGYMMELARTYGQIDIILVGLVVYG 261

Query: 564 CFVLALNRFL 573
              L  +  +
Sbjct: 262 LLGLFSDALV 271


>gi|254421397|ref|ZP_05035115.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196188886|gb|EDX83850.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 262

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I    +V  V +     +   + N F   D+L   WL   T++R +    IA+I
Sbjct: 28  IVIWWIITALELVKPVLLPSPIATFLALWNGFVGGDLLVDFWL---TLYRTLYAFAIAAI 84

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +PVGI +G    +    +       + PA   FPL +        +     +      
Sbjct: 85  LGVPVGILLGANERLYKSFEFLIDFFRSTPATAMFPLFLVVFGIGDFSKVAVAAFAGALV 144

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I FNV  G           A    +  WR +  +I     P    G  TA      
Sbjct: 145 ----IFFNVAYGVMNTRKTRIMAAKVMGVPKWRVFIDVIFFETLPQTFIGLRTAISLTLV 200

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             IV+E+         T G+G  I ++ +      +   ++        LN+F 
Sbjct: 201 VIIVAEMFVG-----STNGMGQRIIDAQQVFDMSGMYASIIATGVMGYGLNQFF 249



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 78/239 (32%), Gaps = 13/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  V+   I  + L        P      +        L      T  R L A  I+ +
Sbjct: 25  LIFIVIWWIITALELVKPVLLPSPIATFLALWNGFVGGDLLVDFWLTLYRTLYAFAIAAI 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   + RL      ++D  +S P        +V F      KV  A  A    
Sbjct: 85  LGVPVGILLGANERLYKSFEFLIDFFRSTPATAMFPLFLVVFGIGDFSKVAVAAFAGALV 144

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF        F++   + N  +     ++   +  W+ F  +    ++P     +  ++S
Sbjct: 145 IF--------FNVAYGVMNTRKTRIMAAKVMGVPKWRVFIDVIFFETLPQTFIGLRTAIS 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                ++ +EM V         G+G  I  A +  D+  +  +++    + +  +Q   
Sbjct: 197 LTLVVIIVAEMFVGSTN-----GMGQRIIDAQQVFDMSGMYASIIATGVMGYGLNQFFL 250


>gi|163737049|ref|ZP_02144467.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis
           BS107]
 gi|161389653|gb|EDQ14004.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis
           BS107]
          Length = 283

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R+VV   + + + + VG+ IG   ++ + + P    L   P     PL V      
Sbjct: 93  VSLSRLVVGAALGASVGVGVGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFGID 152

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ FGT    +                +  SF+++     R I+LPG  P
Sbjct: 153 EASK----YALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   +   A    + +E+           G+GAYI E+        +  GV I+  
Sbjct: 209 GILSGLRISLAIAIILLVAAEMLG------AEHGIGAYILEAGSLYDLERLFAGVAILSV 262

Query: 565 FVLALNRFLW---HPLYLY 580
             + ++  +      L  +
Sbjct: 263 LGVLVSSLIGQVERRLLRW 281



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 86/228 (37%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +        L  + S +  R++    +          +      +   LV
Sbjct: 68  LPRPSDVLATLGELYASGLLWTHVSVSLSRLVVGAALGASVGVGVGVMIGLFSYVRAGLV 127

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F      K           I          + Y ++ N+
Sbjct: 128 PLVAALFPIPKIALLPLFVIWFGIDEASKYA--------LIAFGTFTPTVVATYGAVDNV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS       + +P +MPG++  + +S++     +VA+EM+        
Sbjct: 180 DRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------A 233

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             GIG+YI  A    DL  +   +  +  +  L   L+    R ++ W
Sbjct: 234 EHGIGAYILEAGSLYDLERLFAGVAILSVLGVLVSSLIGQVERRLLRW 281


>gi|94988603|ref|YP_596704.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS9429]
 gi|94992427|ref|YP_600526.1| glycine betaine transport system permease protein / glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS2096]
 gi|94542111|gb|ABF32160.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS9429]
 gi|94545935|gb|ABF35982.1| Glycine betaine transport system permease protein / Glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS2096]
          Length = 520

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRP 412
           + +   +  +  + + F      +  WL  +   +   ++ ++IA +I +P+   +    
Sbjct: 1   MLLWSIYLEVMSMPSLFVTFQNRFNEWLAALGEHLQISLLSLMIALLIGVPLAALLSRSK 60

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             S  +     +    P+     L +  +    L     L +  IF     IL N I G 
Sbjct: 61  RWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVTALVIYAIF----PILQNTITGL 116

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +       E   +F +T W   +   +P   P  ++G  T+       + ++ +   G  
Sbjct: 117 NGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-- 174

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG++I    ++ +   +++G +      +  N  L
Sbjct: 175 -----GLGSFILLGIDRNNANLILIGAISSALLAIIFNSLL 210


>gi|227818860|ref|YP_002822831.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sinorhizobium fredii NGR234]
 gi|36959119|gb|AAQ87544.1| ABC Transporter permease protein [Sinorhizobium fredii NGR234]
 gi|227337859|gb|ACP22078.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Sinorhizobium fredii NGR234]
          Length = 257

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 80/236 (33%), Gaps = 15/236 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                + +      +  +    ++           IT+   V+  ++ + + +  G+W+G
Sbjct: 25  VAAGVIDVFFFPAPVDILNQVVSWVMDTSFYSHVAITLTETVLGYLVGTALGVAAGVWLG 84

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +  + PF + L A P  V  P+ V  +     +       L+ F T     FN +
Sbjct: 85  LSRSAARILDPFIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF----FNAM 140

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G           A           R++  P    + ++   T+ G A   +I+ E    
Sbjct: 141 QGVREVNPVVLSNARILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG- 199

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                 + GLG  IA++        V  G+ I+  FVL ++  L         R L
Sbjct: 200 -----SSAGLGYLIAQAEGNFDAVGVFAGIFILAIFVLIIDSVL-----DVAERRL 245



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DI++ V   +   S   + + T    +   ++              SR    +L P
Sbjct: 36  PAPVDILNQVVSWVMDTSFYSHVAITLTETVLGYLVGTALGVAAGVWLGLSRSAARILDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R           ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVVLSNARILGAKRSDLLRHVYFPAAASWILSSLRTSVG---FAVVGA---IIGEYLGSS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
            G+G  IA A    D + +   +  +   + + D +L    R +I W
Sbjct: 202 AGLGYLIAQAEGNFDAVGVFAGIFILAIFVLIIDSVLDVAERRLIKW 248


>gi|257466076|ref|ZP_05630387.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917232|ref|ZP_07913472.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691107|gb|EFS27942.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 251

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 91/231 (39%), Gaps = 11/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIAS 398
             + + +FW+C+   +   +    +  +   FT       IW+   ++++RV++ I++ +
Sbjct: 10  AIFEIFLFWYCMSIVLKKDLLPNPMITLETTFTLLITSSQIWIHVLVSLYRVMLGILLGT 69

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  IP+GI +G+   I          L   P  VF P+    +    L+    ++ ++ F
Sbjct: 70  VFSIPMGILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFF 129

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
             Q  IL            +  +       + W+  ++++ P       T   ++ G ++
Sbjct: 130 --QQTILI--RDNVKNISEEIYDSIRILQASFWQIIQHVVFPSCLSGIFTSVKSSLGISF 185

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               ++E           +GLG +I +  ++  +  +   +LI+      L
Sbjct: 186 ALLFITE------NFASQSGLGYFITKCMDRRDYVTMYAAILILAILGCIL 230



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 98/257 (38%), Gaps = 17/257 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++   I  +    L    ++I+L           +     + +    +  +   +  R+
Sbjct: 2   KKLSKKIIAIFEIFLFWYCMSIVLKKDLLPNPMITLETTFTLLITSSQIWIHVLVSLYRV 61

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  +++  +F+     L   S+R+        D +  IP + FL     +F+ L  G   
Sbjct: 62  MLGILLGTVFSIPMGILLGYSKRIEKYFGEAFDFLYMIPKIVFLPI---FFVLLGIG--- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L+ I  I T   +  T  +  ++ NI  ++ +  R  + S WQ   ++  P  + G+
Sbjct: 116 --DLSKIALIATVLFFQQTILIRDNVKNISEEIYDSIRILQASFWQIIQHVVFPSCLSGI 173

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++  S+   +  +  +E            G+G +I   +  +D + +  A+L +  + 
Sbjct: 174 FTSVKSSLGISFALLFITENFA------SQSGLGYFITKCMDRRDYVTMYAAILILAILG 227

Query: 253 FLYDQ---LLFRPMIVW 266
            +       L R +  W
Sbjct: 228 CILYTIFCFLERKICKW 244


>gi|257067547|ref|YP_003153802.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease
           [Brachybacterium faecium DSM 4810]
 gi|256558365|gb|ACU84212.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Brachybacterium faecium DSM 4810]
          Length = 278

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 102/263 (38%), Gaps = 17/263 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           RTL   R H          +  +S    +    +    A  +      +          +
Sbjct: 12  RTLEAARAHRARENRLRTRDLALSIAAPVLLVVLWELCARALIIDPRFFPAPTRILSAGV 71

Query: 378 YVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            ++  G +      T+ R++V   + ++  I VG+ +G    +++ + P    L   P  
Sbjct: 72  DMVRTGELWEHTGPTLMRLLVGGGLGALAGIVVGLLMGSSRALNAALGPLFSALYPLPKI 131

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITG 490
             FP+++         P     ++ +F T ++IL  N ++G  A      E  +++  TG
Sbjct: 132 AIFPILLMIFG-----PTETPKIIAVFITTFFILQINTVSGVWAIDRKLLEAGTAYGATG 186

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           +  +R+++LPG  P+  +G  TA G A       E          TTGLG  I  S +  
Sbjct: 187 FARFRFVVLPGAMPFVFSGLRTATGTAVVVVTAVEF-----TGATTTGLGYLIWNSWQLF 241

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
              ++ +G+L++      L   L
Sbjct: 242 IPEKLYVGLLVIGIIGAVLTTIL 264



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 14/253 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +R +  +I   +  V++  +    L+   +    P  I+      +    L ++   T
Sbjct: 27  LRTRDLALSIAAPVLLVVLWELCARALIIDPRFFPAPTRILSAGVDMVRTGELWEHTGPT 86

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +R+L    +  L   V   L   SR L   L P+   +  +P +      ++ F     
Sbjct: 87  LMRLLVGGGLGALAGIVVGLLMGSSRALNAALGPLFSALYPLPKIAIFPILLMIFGP--- 143

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E   I A+F +  + +  +    +  I R L E   ++  +G+ +F ++ +P +
Sbjct: 144 -----TETPKIIAVFITTFFILQINTVSGVWAIDRKLLEAGTAYGATGFARFRFVVLPGA 198

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP +   +  +       V A E      T     G+G  I  + +      +   +L +
Sbjct: 199 MPFVFSGLRTATGTAVVVVTAVEFTGATTT-----GLGYLIWNSWQLFIPEKLYVGLLVI 253

Query: 249 LGVIFLYDQLLFR 261
             +  +   +L R
Sbjct: 254 GIIGAVLTTILSR 266


>gi|254424863|ref|ZP_05038581.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196192352|gb|EDX87316.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 280

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     ++ RV     I SI+ + +G+ +G+  +I +      ++L   P   F  L +
Sbjct: 84  LIAHVLASLRRVFTAFGIGSIVGLLLGLLMGYYKYIRAAFYVATEILRPIPPLAFITLFI 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  ++  L +           ++ N + G  A P +    A +        + Y+I
Sbjct: 144 LWFGIGEVSKVLIILYAGALI----VMLNTMEGVRACPKEKILAARTLGANDLAIFAYVI 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY  TG   A    +   + +E+ +         G+G  I +++   +   + +G
Sbjct: 200 FPAALPYIFTGMRVALSVDFGILVAAELLAGDL------GMGYIIQDASTFFNVEALFVG 253

Query: 559 VLIMCCFVLALNRFL 573
           +L++  F +  +  L
Sbjct: 254 ILMIAFFGVVSDFLL 268



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 81/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   +  R+ +A  I  +   +   L    + +        +I++ IP L F+T  +
Sbjct: 84  LIAHVLASLRRVFTAFGIGSIVGLLLGLLMGYYKYIRAAFYVATEILRPIPPLAFITLFI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E++ +  I  +    +  +  + +   P++    +R+   +    F
Sbjct: 144 LWFGIG--------EVSKVLIILYAGALIVMLNTMEGVRACPKEKILAARTLGANDLAIF 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            Y+  P ++P +   M +++S  +  +VA+E++          G+G  I  A    ++ A
Sbjct: 196 AYVIFPAALPYIFTGMRVALSVDFGILVAAELLAG------DLGMGYIIQDASTFFNVEA 249

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   +L +     + D LL
Sbjct: 250 LFVGILMIAFFGVVSDFLL 268


>gi|152975672|ref|YP_001375189.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024424|gb|ABS22194.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 279

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 107/235 (45%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF++++ +  ++ +  ++ ++    +  +   L+++   +   +T   +L++++IS++  
Sbjct: 51  AFLMIVIVCFLIWYTARKVSLLIFTLIGLLFILNINY-WEQTMQTLALVLTSVIISIIVG 109

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA+++ R    L P LD MQ++P   +L   + +F     G V G   + IFA+ 
Sbjct: 110 IPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGV---GVVPGIIASVIFAMP 166

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +P DL E + +F  +  QK + + +P +   ++  +  S+   
Sbjct: 167 -----PTIRFTDLGIRQVPEDLIEAADAFGSTASQKLFKVQLPLATGTIMAGINQSIMLS 221

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + ++         PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 222 LSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 81/236 (34%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVI-----WLGCITMFRVVVLIII 396
            L      ++  +   + W +   + +  FT   +L+++          T+  V+  +II
Sbjct: 45  FLTFIPAFLMIVIVCFLIWYTARKVSLLIFTLIGLLFILNINYWEQTMQTLALVLTSVII 104

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + I+ IP+GI        S  ++P    +   PA V+    ++      +   +   +  
Sbjct: 105 SIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFA 164

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  T  +       G    P D  E A +F  T  +    + LP      + G   +   
Sbjct: 165 MPPTIRF----TDLGIRQVPEDLIEAADAFGSTASQKLFKVQLPLATGTIMAGINQSIML 220

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 221 SLSMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|84499626|ref|ZP_00997914.1| sulfonate ABC transporter, permease protein, putative [Oceanicola
           batsensis HTCC2597]
 gi|84392770|gb|EAQ04981.1| sulfonate ABC transporter, permease protein, putative [Oceanicola
           batsensis HTCC2597]
          Length = 278

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 20/269 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +    R  G      P  F       R    + +  F ++  +A           +  
Sbjct: 4   ATLSMDTRAAGTGAQGRPVAFRGGGFAPRPRRWVGVVVFVLLILIAEWGTRAGWISALTL 63

Query: 371 FTYQDVLYVIWLGCIT----------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
               DV         +          + R+ V  +I   + + VG+ IG   +I + + P
Sbjct: 64  PKPSDVFGTFQELYASGMLFKHLGPSLARLAVGALIGVSVGVSVGVLIGLFSYIRAGMVP 123

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L   P     PL V        +       L+ FGT    +               
Sbjct: 124 LVAALFPIPKIALLPLFVIWFGIGEGSK----YALIAFGTFTPTVVATYGAVDNVDRTLI 179

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +  SF ++ W   R I+LPG  P  ++G   +   A    + +E+           G+G
Sbjct: 180 RMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEFGIG 233

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           AYI ++        +  GV+I+    + +
Sbjct: 234 AYILQAGSLYDLERLFAGVVILSLLGVIV 262



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 24/268 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSL 61
            F      P     +  V+ + +I I   G +           P D+            L
Sbjct: 23  AFRGGGFAPRPRRWVGVVVFVLLILIAEWGTRAGWISALTLPKPSDVFGTFQELYASGML 82

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   +  R+    +I +        L      +   +VP++  +  IP +  L   V+
Sbjct: 83  FKHLGPSLARLAVGALIGVSVGVSVGVLIGLFSYIRAGMVPLVAALFPIPKIALLPLFVI 142

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      K           I          + Y ++ N+ R L  + +SF LS W    
Sbjct: 143 WFGIGEGSKYA--------LIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFGLSWWSIVR 194

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MPG++  + +S++     +VA+EM+          GIG+YI  A    DL  +
Sbjct: 195 KIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEFGIGAYILQAGSLYDLERL 248

Query: 242 LYAMLTMLGVIFLY---DQLLFRPMIVW 266
              ++ +  +  +      ++ R ++ W
Sbjct: 249 FAGVVILSLLGVIVSGAIGMIERRVLGW 276


>gi|83951782|ref|ZP_00960514.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83836788|gb|EAP76085.1| glycine betaine/proline ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 690

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 90/613 (14%), Positives = 206/613 (33%), Gaps = 85/613 (13%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F+ L + ++IG++           +       + + L        +  T   +  ++ +
Sbjct: 92  LFNALPWPVLIGLVTGFGWWAGGLRLAALGGIGMSLVLASGY-WTESMNTLSLVAVSVPL 150

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+       LA +  R+  ++  I+D+MQ++P   +LT  ++ F     G V+G   +A
Sbjct: 151 ALIAGGAVGILAYEFPRIKGLVQGIMDVMQTVPTFAYLTPLLLLFGF---GPVVGLIASA 207

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I+A        M  ++   L  +  D++E +     +  Q+ + + +P +   ++  +  
Sbjct: 208 IYA-----APPMARNVLLGLERVESDIKEAAIMSGGTRLQQLFLIEIPAAKTQIMVGVNQ 262

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      V+ + +I   +       IG  + L +++  L   L A + ++    + D++
Sbjct: 263 CLMAALSMVIIAAVIGGFED------IGWEVLLTMRKAQLGPSLLAGMVIVVFAVIIDRM 316

Query: 259 LFR-----------------------PMIVWSNKFRLERTTGIYPADSWV-----LYLFR 290
                                      +++W  +        + PA  W+       L R
Sbjct: 317 SLHLAMTRERHDLRIAGAIAGVGVVVAILLW-GRAAPGEVAVMEPAKQWLDTTLSRVLTR 375

Query: 291 KTNFLRFIGYSSW------------NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338
               L  I   +                 P +   +                 L L    
Sbjct: 376 NAGTLDAIKNGAMFYGLLPVRIGLDGAVLPFTWGFQWTAAMSAWFLGAAALAGLALGLAG 435

Query: 339 RVSYMLDIFWFCVV-------------CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
           R++  L +     V                   I W + G+ +   T   ++ V++ G  
Sbjct: 436 RITAGLVLLILAGVLETGVSELPWPFLLVAVAAIGWTAGGWRLAALTTGLMVLVLFSGLW 495

Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               ++++   V +   +++   +G+     P +   ++P   +L   P  VF   V+  
Sbjct: 496 QKALLSLYLAGVSVFACAVMGGLIGLASAASPMVWRVVRPICDMLQTIPLFVFLIPVLMF 555

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +      L +       ++     G  + P++  E A S   T W+  R +  P
Sbjct: 556 FQIGEFS----AFLAICMYAIVPMIRYTRQGLVSTPDELIEAAISSGATSWQVMREVRAP 611

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  + G       A+   +++ +         TTGLG  I  +  +      ++   
Sbjct: 612 YAAPTILLGLNQTILYAFAMLVIAALVG-------TTGLGQSIFLALGQADVGLGIVSGA 664

Query: 561 IMCCFVLALNRFL 573
            M    L  +R +
Sbjct: 665 AMAILALVADRLV 677


>gi|300937718|ref|ZP_07152520.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457279|gb|EFK20772.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 264

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 15  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  S     +L   + +++++P L  +   +++F           E 
Sbjct: 75  SIGGSLGLILGLISGLSHWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 127 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 187 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 240

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 241 VSAQLLERLWLRWNPAYHLKEAT 263



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 89/260 (34%), Gaps = 26/260 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 12  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 71

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 72  IGFSIGGSLGLILGLISGLSHWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 127

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 128 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 187

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV----- 566
            A G  W   IV+E  S        +G+G     + E      VV+ +++          
Sbjct: 188 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 241

Query: 567 --LALNRFL--WHPLYLYGT 582
               L R    W+P Y    
Sbjct: 242 SAQLLERLWLRWNPAYHLKE 261


>gi|292670600|ref|ZP_06604026.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
 gi|292647766|gb|EFF65738.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
          Length = 247

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 24/251 (9%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---------YVIWLGCITMFRVVVLI 394
           L +F F +   +A+      +  I    + + VL          +      ++ R++V +
Sbjct: 6   LRMFAFGIFICLAVWAGAAQLLQIPVVPSPELVLIRLAQKFLDTIAVHAGYSLMRIMVGL 65

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
             A +   P+G+ +G+ P ++  + P   L    P     P+V+        +      L
Sbjct: 66  FAAVVAGYPIGVLMGYFPRVNRLLAPILYLSYPIPKIALLPVVMLLFGVGETSK----LL 121

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+     + ++  V    +A P++          +  +  R+IILP   P ++T    A 
Sbjct: 122 LVFLIIVFQVVVAVRDAIAAIPSETYFPLRVLGASFTQLVRHIILPASLPKFITAVRVAM 181

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
             A +    +E            G+G YI ++  + ++ ++  G++++          L 
Sbjct: 182 ATAISVLFFTETFG------TQYGIGYYIMDAWLRVNYLDMYAGIVVLSMMGFLFFVLL- 234

Query: 575 HPLYLYGTRCL 585
                +  R L
Sbjct: 235 ----DFAERRL 241



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 96/250 (38%), Gaps = 19/250 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F +   + V      LL      +    ++ +    LD  ++  +A  + +R++  +  +
Sbjct: 11  FGIFICLAVWAGAAQLLQIPVVPSPELVLIRLAQKFLD--TIAVHAGYSLMRIMVGLFAA 68

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++  +    L     R+  +L PIL +   IP +  L   ++ F      K++       
Sbjct: 69  VVAGYPIGVLMGYFPRVNRLLAPILYLSYPIPKIALLPVVMLLFGVGETSKLL------- 121

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   V+ +  ++  ++  IP +     R    S  Q   ++ +P S+P  +  + ++
Sbjct: 122 -LVFLIIVFQVVVAVRDAIAAIPSETYFPLRVLGASFTQLVRHIILPASLPKFITAVRVA 180

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KEQDLLAILYAMLTMLGVIFLYD 256
           M+       A  ++   +T     GIG YI  A       D+ A +  +  M  + F+  
Sbjct: 181 MA------TAISVLFFTETFGTQYGIGYYIMDAWLRVNYLDMYAGIVVLSMMGFLFFVLL 234

Query: 257 QLLFRPMIVW 266
               R +  W
Sbjct: 235 DFAERRLCAW 244


>gi|332982785|ref|YP_004464226.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
 gi|332700463|gb|AEE97404.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
          Length = 244

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 18/227 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W   +    I + ++    + +                +++R+   I ++ +I +
Sbjct: 21  AISLIWRMPIIPSPIAVFYKFFEILPSKLGVH--------ALYSLWRIAAGIALSLVIGV 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G+         P    L   P     P+V+  +     +    + L+++F    
Sbjct: 73  PIGLCMGYFSEFGRISSPVVYFLYPIPKIALLPVVMLLLGLGEASKIAMIVLIIVF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+  V       P +      S        +  II+P   P  +T      G A +   
Sbjct: 129 QIIVTVRDAVKGIPKEMYYSLISLGAKRGNIFSDIIIPASLPEVLTSMRVGLGTAISVLF 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            G+G +I ++  + ++ E+  G++++     A+
Sbjct: 189 FTETFG------TEYGIGYFIMDAWMRVNYLEMYSGIVMLSIIGFAV 229



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L  +A  +  R+ + + +SL+               G +  P++  +  IP +  L 
Sbjct: 46  PSKLGVHALYSLWRIAAGIALSLVIGVPIGLCMGYFSEFGRISSPVVYFLYPIPKIALLP 105

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E + I  I    V+ +  ++  ++  IP+++     S      
Sbjct: 106 VVMLLLGLG--------EASKIAMIVLIIVFQIIVTVRDAVKGIPKEMYYSLISLGAKRG 157

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             F  + +P S+P ++ +M + +        A  ++   +T     GIG +I  A    +
Sbjct: 158 NIFSDIIIPASLPEVLTSMRVGLG------TAISVLFFTETFGTEYGIGYFIMDAWMRVN 211

Query: 238 LLAILYAMLTMLGVIFLY 255
            L +   ++ +  + F  
Sbjct: 212 YLEMYSGIVMLSIIGFAV 229


>gi|325478577|gb|EGC81689.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 338

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  IF    +    + + +     ++ +    D  Y++     ++  +    II S++ I
Sbjct: 102 IFIIFDVLTLKKSILKLPYFPWLDMILNSMAADKSYLLESVVSSLKLLFTGYIIGSLLGI 161

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GI  G+   ++  + P  +LL   P   + P+V+       +N       ++  G  +
Sbjct: 162 ITGILAGYFDKVNYWVDPILKLLGPIPTTTWLPVVMVLA----INLFQGAVFIIALGVWF 217

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  + I G       + + A +      +  R I +P   P    G ++A   A NA I
Sbjct: 218 QVSLSTITGIRNVNPAYYDAAQTLGANNMQMVRKIAIPSASPNIFQGLVSAMSAACNALI 277

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI   +    +  +   ++++    + +N  +
Sbjct: 278 VAEMMG------VESGLGWYITWKSSWADYSAMYGAIILLAITFIIVNILI 322



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 96/244 (39%), Gaps = 14/244 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           +P    +    ++  ++ +    ++    P   + +  +  D   L +    +   + + 
Sbjct: 93  WPLFTAVFVIFIIFDVLTLKKSILKLPYFPWLDMILNSMAADKSYLLESVVSSLKLLFTG 152

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I  L   +   LA    ++   + PIL ++  IP   +L   +V  +NL+ G      
Sbjct: 153 YIIGSLLGIITGILAGYFDKVNYWVDPILKLLGPIPTTTWLPVVMVLAINLFQG------ 206

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A+F I     + ++ S    + N+     + +++   +  Q    + +P + P +   
Sbjct: 207 --AVFIIALGVWFQVSLSTITGIRNVNPAYYDAAQTLGANNMQMVRKIAIPSASPNIFQG 264

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++ +MS     ++ +EM+ V        G+G YI       D  A+  A++ +     + 
Sbjct: 265 LVSAMSAACNALIVAEMMGVES------GLGWYITWKSSWADYSAMYGAIILLAITFIIV 318

Query: 256 DQLL 259
           + L+
Sbjct: 319 NILI 322


>gi|209520913|ref|ZP_03269652.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209498637|gb|EDZ98753.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 282

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R V    I   I + +G+  G        +    Q++   PA    PLV+      
Sbjct: 84  VSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMIRNIPALAMIPLVILWFGIE 143

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E+A S+ + G+  +R++ILPG  P
Sbjct: 144 ----ESAKVFLVALGVFFPVYVNTFHGIRSVDLNLIEMARSYGVKGFALYRHVILPGALP 199

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 200 SILVGVRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAA 253

Query: 565 FVLALNRF 572
                +  
Sbjct: 254 LGKLADML 261



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 97/259 (37%), Gaps = 23/259 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR------TTLRMLSA 75
           L     +  ++   +         R + + + +     SL Q          +T R +S 
Sbjct: 33  LPWLAPIAILLAWEIAARSGALSTRVLPEPLAVVKAAWSLIQSGEMWADVKVSTWRAVSG 92

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             I      V        +   +VL   + ++++IP L  +   +++F           E
Sbjct: 93  FAIGGGIGLVLGLATGLFKPAEIVLDSTVQMIRNIPALAMIPLVILWFGIE--------E 144

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A +F +     + +  + +  + ++  +L E++RS+ + G+  + ++ +P ++P ++  
Sbjct: 145 SAKVFLVALGVFFPVYVNTFHGIRSVDLNLIEMARSYGVKGFALYRHVILPGALPSILVG 204

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  +    W  ++ +E I          GIG     A +      ++  +L    +  L 
Sbjct: 205 VRFAFGLMWVTLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKLA 258

Query: 256 DQL---LFRPMIVWSNKFR 271
           D L   L R  + W   ++
Sbjct: 259 DMLAKSLERVSLRWHPAYQ 277


>gi|224531674|ref|ZP_03672306.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia valaisiana VS116]
 gi|224511139|gb|EEF81545.1| glycine betaine, L-proline ABC transporter, permease protein
           [Borrelia valaisiana VS116]
          Length = 299

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 85/208 (40%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++ +S++             R  + L PILD+MQ++P   +L   
Sbjct: 83  NLWEASMDTIAIIFVSVFVSVILGIPIGIFGGYFPRFYVFLKPILDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +  ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TASAIFATIIFAMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+  ++  +  S+      +V + M+          G+G  +  +I+  +  
Sbjct: 195 LLQVQLPLSLQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSIERLNFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVIIAIILDRIMQSIFIKFS 275



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 92/229 (40%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           I +  +VC ++     + + +++    +  + + +W   + T+  + V + ++ I+ IP+
Sbjct: 50  ILFILIVCLLSFVFLKKRLIFLILPGFFFILYFNLWEASMDTIAIIFVSVFVSVILGIPI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI+ G+ P     ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GIFGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G     ++  E A SF  +  R    + LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIVQVSDEVIEAAKSFGSSNLRILLQVQLPLSLQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+ +F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIM 267


>gi|50914198|ref|YP_060170.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS10394]
 gi|50903272|gb|AAT86987.1| Glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS10394]
          Length = 520

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRP 412
           + +   +  +  + + F      +  WL  +   +   ++ ++IA +I +P+   +    
Sbjct: 1   MLLWSIYLEVMSMPSLFVTFQNRFNEWLAALGEHLQISLLSLMIALLIGVPLAALLSRSK 60

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             S  +     +    P+     L +  +    L     L +  IF     IL N I G 
Sbjct: 61  RWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVTALVIYAIF----PILQNTITGL 116

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +       E   +F +T W   +   +P   P  ++G  T+       + ++ +   G  
Sbjct: 117 NGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-- 174

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG++I    ++ +   +++G +      +  N  L
Sbjct: 175 -----GLGSFILLGIDRNNANLILIGAISSALLAIIFNSLL 210


>gi|83643736|ref|YP_432171.1| proline/glycine betaine ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83631779|gb|ABC27746.1| ABC-type proline/glycine betaine transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 281

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 16/236 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +  I+       +  + P   +  + +  ++    +    T   +L A    +LF   
Sbjct: 61  LFIAVIVAFAAWRHRNWSSPLFALIALGLIWNMGY-WEETIETLALVLFATGFCVLFGVP 119

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA    L   + P+LD+MQ+IP   +L  T+  F     G V G     IFAI   
Sbjct: 120 IGIAAAHRPWLYRGMRPLLDLMQTIPTFVYLIPTLTLFGL---GVVPGLISTVIFAIAAP 176

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  +  +P +L E  ++F          + +P +M  ++  +   +     
Sbjct: 177 -----IRLTHLGITQVPEELLEAGKAFGCKPSVLLLKVEIPAAMSSIMAGVTQCIMLSLS 231

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            VV + ++          G+G  +  A+   D+     A L ++ +  L D+L  R
Sbjct: 232 MVVIAALV-------GADGLGKPVVRALNTVDIATGFEAGLAIVLIAILLDRLFKR 280



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 74/238 (31%), Gaps = 16/238 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
           +L    +  +  +    AW+   +    F    +  +  +G       T+  V+      
Sbjct: 54  LLFAPPWLFIAVIVAFAAWRHRNWSSPLFALIALGLIWNMGYWEETIETLALVLFATGFC 113

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +  +P+GI    RP +   ++P   L+   P  V+    +  ++ + L     L   +I
Sbjct: 114 VLFGVPIGIAAAHRPWLYRGMRPLLDLMQTIPTFVYL---IPTLTLFGLGVVPGLISTVI 170

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           F     I      G +  P +  E   +F          + +P      + G       +
Sbjct: 171 FAIAAPIRL-THLGITQVPEELLEAGKAFGCKPSVLLLKVEIPAAMSSIMAGVTQCIMLS 229

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +  +++ +           GLG  +  +             L +    + L+R    
Sbjct: 230 LSMVVIAALVG-------ADGLGKPVVRALNTVDIATGFEAGLAIVLIAILLDRLFKR 280


>gi|330447870|ref|ZP_08311518.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492061|dbj|GAA06015.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 297

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 98/232 (42%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LVI I+  + +    +      V +  + +    +     RT   +L + ++++      
Sbjct: 65  LVIAILAAIAYVASRSWKLSLGVVLSFLFIGFFGMWDNTMRTMSIILVSTLVAIGIGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S R+  ++ P+LD+MQ++P   +L   V+       GK+ G     I+A+    
Sbjct: 125 GIAMARSDRVQRIVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAVP--- 178

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +       +  +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 179 --PVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 95/281 (33%), Gaps = 29/281 (10%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            +F R  G +  +FF PL + +    + L                     + L I     
Sbjct: 30  RSFSREYGDTIESFFDPLLSFLIWFEKLLLATP-----------------WWLVIAILAA 72

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  VA   +W+    +V  F +     +      TM  ++V  ++A  I IP+GI +   
Sbjct: 73  IAYVA-SRSWKLSLGVVLSFLFIGFFGMWDNTMRTMSIILVSTLVAIGIGIPIGIAMARS 131

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   + P   ++   PA V+   VV  +        +   + ++      ++     G
Sbjct: 132 DRVQRIVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIYAVPPVIRLTNLG 187

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 +  E A+++  +  +    + +P   P  + G       A    +++ +     
Sbjct: 188 IRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAMVVIASMIG--- 244

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 GLG  + +S     F   +L  L +    +  +R 
Sbjct: 245 ----VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281


>gi|269929270|ref|YP_003321591.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
 gi|269788627|gb|ACZ40769.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
          Length = 286

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 97/237 (40%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               ++++ +   L    + TTV    + ++        L   A  T   +++++VIS+ 
Sbjct: 55  WPVMLVLVAVAGALSTRSKLTTVMLVALMVMVGAFGYWHL---AMLTLSIIVTSVVISVA 111

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LAA+S R   ++ P+LD  Q++P   +L   +++F           ++ A+ A
Sbjct: 112 IGLPLGILAARSDRAETIMRPLLDGAQTMPSFVYLVPALMFFGLG--------KVPAVMA 163

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  M       +  +     E + ++  +  Q  + + +P ++P ++  +  +  
Sbjct: 164 TVIYAMPPMIRLTSLGIRTVTEGAIEAAEAYGATPRQILFDVQLPLALPTIMAGVNQTTM 223

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + MI           +GS + +AI+  D      A LT++ +  + D++
Sbjct: 224 MALAMVVIASMIGTTT-------VGSEVLMAIQRIDPGRGAEAGLTIVALAIVIDRI 273



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/280 (10%), Positives = 77/280 (27%), Gaps = 18/280 (6%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
               ++            +    +      I       F  +           +     V
Sbjct: 12  PLANWVNRLVSWLLVTFGDVFDAISTATLWILLRVESAFTAIPWP-------VMLVLVAV 64

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G     +  +   +V             L  +T+  +V  ++I+  I +P+GI      
Sbjct: 65  AGALSTRSKLTTVMLVALMVMVGAFGYWHLAMLTLSIIVTSVVISVAIGLPLGILAARSD 124

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              + ++P        P+ V+    +           +   +  +      ++     G 
Sbjct: 125 RAETIMRPLLDGAQTMPSFVYLVPALMFFGLG----KVPAVMATVIYAMPPMIRLTSLGI 180

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                   E A ++  T  +    + LP   P  + G       A    +++ +      
Sbjct: 181 RTVTEGAIEAAEAYGATPRQILFDVQLPLALPTIMAGVNQTTMMALAMVVIASMIG---- 236

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              TT +G+ +  + ++          L +    + ++R 
Sbjct: 237 ---TTTVGSEVLMAIQRIDPGRGAEAGLTIVALAIVIDRI 273


>gi|228953120|ref|ZP_04115179.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229079976|ref|ZP_04212507.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock4-2]
 gi|229110236|ref|ZP_04239810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-15]
 gi|229190884|ref|ZP_04317875.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 10876]
 gi|228592552|gb|EEK50380.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 10876]
 gi|228673222|gb|EEL28492.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-15]
 gi|228703355|gb|EEL55810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock4-2]
 gi|228806535|gb|EEM53095.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 187

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F  
Sbjct: 1   MQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGV 60

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G V G   + IFA+               +  +P DL E + +F  +  QK + + +
Sbjct: 61  ---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQL 112

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A 
Sbjct: 113 PLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAG 165

Query: 246 LTMLGVIFLYDQL 258
           L ++ +  + D++
Sbjct: 166 LAIVVIAIILDRI 178



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+  +II+ I+ IP+GI        S  ++P    +   PA V+    ++      
Sbjct: 3   TLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGV 62

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  +  T  +       G    P D  E A++F  T  +    + LP     
Sbjct: 63  VPGIIASVIFAMPPTIRF----TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGT 118

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   + +  + + +           GLG  +  S  + +        L +   
Sbjct: 119 IMAGVNQSIMLSLSMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVI 171

Query: 566 VLALNRF 572
            + L+R 
Sbjct: 172 AIILDRI 178


>gi|325680988|ref|ZP_08160524.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324107333|gb|EGC01613.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 322

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 82/204 (40%), Gaps = 10/204 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               +D  ++      ++  +V    IA I    +G+ +G+   +++   P A++L+  P
Sbjct: 116 EVFLKDSEFIAEGIGHSLMILVTGFSIALISGNILGMIVGWVKRLNNDFTPIAKVLSPIP 175

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
             V+ P +++ +  +          ++  G  W I   +I    +      + A + +++
Sbjct: 176 PMVYTPYLIALMPTF----TSASIAVIGIGMFWPIFLGMINRVGSINGRLIDSAKAMNVS 231

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  +ILP   P  V          +   I++E+         T+GLG +I + ++ 
Sbjct: 232 TPTMLFKVILPYSIPSIVGNLKIQISTIFMILIMAEMIG------ATSGLGFFIKKYSDY 285

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
             +  V+ G+ ++   +  LN  L
Sbjct: 286 ADYARVLAGIFVVGAVITILNVLL 309



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 89/235 (37%), Gaps = 14/235 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             L+  I   +L        P           D   + +    + + +++   I+L+   
Sbjct: 89  LFLIWDIFFRILGKGNPVLSPPMENVFEVFLKDSEFIAEGIGHSLMILVTGFSIALISGN 148

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   +    +RL     PI  ++  IP + +  + +          +     A+I  I  
Sbjct: 149 ILGMIVGWVKRLNNDFTPIAKVLSPIPPMVYTPYLIAL--------MPTFTSASIAVIGI 200

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              W +   M   + +I   L + +++  +S     + + +P+S+P +V N+ + +S  +
Sbjct: 201 GMFWPIFLGMINRVGSINGRLIDSAKAMNVSTPTMLFKVILPYSIPSIVGNLKIQISTIF 260

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++ +EMI          G+G +I       D   +L  +  +  VI + + LL
Sbjct: 261 MILIMAEMIG------ATSGLGFFIKKYSDYADYARVLAGIFVVGAVITILNVLL 309


>gi|241205792|ref|YP_002976888.1| choline ABC transporter permease [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859682|gb|ACS57349.1| choline ABC transporter, permease protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 285

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L+A  + ++        AA+   +   + PILD+MQ+IP   +L   ++
Sbjct: 94  WKETTETLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPILDLMQTIPTFVYLIPALI 153

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI               + + P  L E + +F  +  Q   
Sbjct: 154 LFGL---GMVPGLIATVIFAIPAP-----IRLTRLGIISTPPSLVEAAIAFGATPIQVLR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +PF+ P ++  +  ++      VV + ++         PG+G  +  A+   ++   
Sbjct: 206 KIELPFATPQIMAGLTQTIMLSLSMVVIAALV-------GAPGLGVPVVRALNTVNIAKG 258

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ +  + D++ 
Sbjct: 259 FEAGFCIVILAIILDRMF 276



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  +I IP+GI    RP + + ++P   L+   P  V+    +       
Sbjct: 100 TLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPILDLMQTIPTFVYLIPALILFGLGM 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G  + P    E A +F  T  +  R I LP   P 
Sbjct: 160 VPGLIATVIFAIPA---PIRL-TRLGIISTPPSLVEAAIAFGATPIQVLRKIELPFATPQ 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +  +       +   
Sbjct: 216 IMAGLTQTIMLSLSMVVIAALVG-------APGLGVPVVRALNTVNIAKGFEAGFCIVIL 268

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 269 AIILDRMF 276


>gi|238751321|ref|ZP_04612814.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
 gi|238710379|gb|EEQ02604.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
          Length = 255

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 92/234 (39%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S+++      +    +I I  + I  +   +       +I    I++ R+    ++A I
Sbjct: 17  ISFIVVWQLVSLSGRFSIYILPKPITVVETAYELLVSGELIRHLLISLERIFWGYLLAII 76

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I   + + +     I S I P    L   P     PL+++ V             ++I G
Sbjct: 77  ISSILTLLLCSSSLIKSIIDPPLNFLRQIPPLALLPLLLAWVGIGEEQK----IAVIILG 132

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + ILFN I G         +VA   ++   + +  I LP   P  + G     G +W 
Sbjct: 133 CLFPILFNFIGGVEQVDKKLIDVAKVLNLNKSQIFYRIYLPSALPSILIGLRVGLGFSWR 192

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + + +E+ +       + GLG  + ++        +++GVL++ C  +  +  L
Sbjct: 193 SLVGAELIA------SSAGLGYMMLDAESLARTDIILVGVLVIGCMGMFTDYLL 240



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 103/248 (41%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + IF  I  L++F++V  ++++     I     P  +V+     L    L ++   +  R
Sbjct: 7   KNIFITITTLISFIVVWQLVSLSGRFSIYILPKPITVVETAYELLVSGELIRHLLISLER 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    +++++ + +   L   S  +  ++ P L+ ++ IP L  L   + +         
Sbjct: 67  IFWGYLLAIIISSILTLLLCSSSLIKSIIDPPLNFLRQIPPLALLPLLLAWVGIG----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E   I  I    ++ + F+    +  + + L +V++   L+  Q F+ + +P ++P 
Sbjct: 122 ---EEQKIAVIILGCLFPILFNFIGGVEQVDKKLIDVAKVLNLNKSQIFYRIYLPSALPS 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + + +   W  +V +E+I          G+G  +  A        IL  +L +  +
Sbjct: 179 ILIGLRVGLGFSWRSLVGAELIASSA------GLGYMMLDAESLARTDIILVGVLVIGCM 232

Query: 252 IFLYDQLL 259
               D LL
Sbjct: 233 GMFTDYLL 240


>gi|71903495|ref|YP_280298.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS6180]
 gi|71802590|gb|AAX71943.1| glycine betaine transport system permease protein [Streptococcus
           pyogenes MGAS6180]
          Length = 520

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 98

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 99  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 154

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 155 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 207

Query: 571 RFL 573
             L
Sbjct: 208 SLL 210


>gi|28895903|ref|NP_802253.1| ABC transporter ATP-binding protein [Streptococcus pyogenes SSI-1]
 gi|28811153|dbj|BAC64086.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes SSI-1]
          Length = 520

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 98

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 99  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 154

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 155 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 207

Query: 571 RFL 573
             L
Sbjct: 208 SLL 210


>gi|51893654|ref|YP_076345.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857343|dbj|BAD41501.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 253

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 12/186 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             + +RV+   +I+  + +P+G+++G        +     L    P  VF P+++  +  
Sbjct: 61  LASAYRVIASTLISLALGVPLGLYLGRSGGPVGSV--LVYLTYPVPKVVFLPVIMVVLGI 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    ++L++ F     IL  V   A+  P        S      + +R++ILP   
Sbjct: 119 GDESKIFLITLVIFF----QILVTVKDAAANVPRGLIRSVQSLGGGEAQIYRHVILPAAL 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    + G A      +E       +    GLG+Y+ ++    ++ ++  GV+ M 
Sbjct: 175 PAIFTALRLSTGTAVAVLFFAE------TYATRRGLGSYVWDAWSMHAYSKMFAGVMAMA 228

Query: 564 CFVLAL 569
                 
Sbjct: 229 LMGFGF 234



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 19/214 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R++++ +ISL           +S   G V   ++ +   +P + FL   +
Sbjct: 56  LVEHFLASAYRVIASTLISLALGVPLGLYLGRS--GGPVGSVLVYLTYPVPKVVFLPVIM 113

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V             + + IF I     + +  ++  +  N+PR L    +S      Q +
Sbjct: 114 VVLGIG--------DESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGGEAQIY 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P +   + +S         A  ++   +T     G+GSY+  A        
Sbjct: 166 RHVILPAALPAIFTALRLSTG------TAVAVLFFAETYATRRGLGSYVWDAWSMHAYSK 219

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFR 271
           +   ++ M  + F +  +L    R +  W+ K R
Sbjct: 220 MFAGVMAMALMGFGFYVVLDIAERYLCPWAEKQR 253


>gi|227871942|ref|ZP_03990333.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
 gi|227842203|gb|EEJ52442.1| binding-protein-dependent transport systems inner membrane
           component [Oribacterium sinus F0268]
          Length = 296

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 84/201 (41%), Gaps = 10/201 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   ++     ++  + +  IIA+++ + +G+++G   H+S  + P  ++++  P
Sbjct: 92  SVFLGDHQKILQGVFSSLQLLFIAFIIATVLGVSLGLFVGLSDHLSGIVLPIVRVISPIP 151

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
             ++ P  V+ +  +     +    ++     W +  N++             A + +++
Sbjct: 152 PIIYSPYAVALLPTFR----VAAIFVVTLTIFWSLFMNMVLSVREIDPKIMNSAKTLNVS 207

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            +     +++P   P  +     +   ++     +E+         T+GLG YI   ++ 
Sbjct: 208 KFSMIVDVLIPYSLPGLINSISVSISTSFLVLTAAEMIGG------TSGLGWYIKYHSDF 261

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
            +F +VV G+ ++   V  LN
Sbjct: 262 ANFDKVVFGIFMIGLVVTILN 282



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 98/248 (39%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   ++   I+   +        P           D   + Q    +   +  A +I+ +
Sbjct: 62  LYCILIFWEIMTAKIGVKNSMLYPAPENVFSVFLGDHQKILQGVFSSLQLLFIAFIIATV 121

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  L  +++PI+ ++  IP + +  + V               +AAIF 
Sbjct: 122 LGVSLGLFVGLSDHLSGIVLPIVRVISPIPPIIYSPYAVALL--------PTFRVAAIFV 173

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  W++  +M  S+  I   +   +++  +S +     + +P+S+PGL+ ++ +S+S
Sbjct: 174 VTLTIFWSLFMNMVLSVREIDPKIMNSAKTLNVSKFSMIVDVLIPYSLPGLINSISVSIS 233

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +  + A+EMI          G+G YI       +   +++ +  +  V+ + +     
Sbjct: 234 TSFLVLTAAEMIGG------TSGLGWYIKYHSDFANFDKVVFGIFMIGLVVTILNFGVKS 287

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 288 LRRVLVPW 295


>gi|197295267|ref|YP_002153808.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944746|emb|CAR57350.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 295

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 103/258 (39%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLP 62
           P  +SRRI    +    ++A VL+     +      +  VP     +      ++   L 
Sbjct: 33  PAPLSRRIAGATWFRRGVIALVLIAVWEIVARIVANDLLVPTFGATLAAFVQGIESGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    + +L  F   +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 93  VKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  + +W +  S+Y     +P  L+   R++ L+G ++   
Sbjct: 153 FGLGTG--------SLLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIAL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E     + 
Sbjct: 205 ILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLVENLVF 280



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 9/278 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           +  +  L                     +R  ++ +L   W  V   VA  +   + G  
Sbjct: 19  TRPLDPLPDAERAAPAPLSRRIAGATWFRRGVIALVLIAVWEIVARIVANDLLVPTFGAT 78

Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  F    +   ++    I+M  ++    +  ++   +             +     +  
Sbjct: 79  LAAFVQGIESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFN 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+    P+ +        +    L  +++    W +  ++  G    P   K    ++
Sbjct: 139 PLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNY 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++
Sbjct: 195 GLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQN 252

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +     V  G+  +    L +   ++  L     R 
Sbjct: 253 RNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRR 290


>gi|94994401|ref|YP_602499.1| glycine betaine transport system permease protein / glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547909|gb|ABF37955.1| Glycine betaine transport system permease protein / Glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS10750]
          Length = 520

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+   +      S  +     +    P+     L +  +    L    
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVT 98

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G +       E   +F +T W   +   +P   P  ++G 
Sbjct: 99  ALVIYAIF----PILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGV 154

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 155 RTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLAIIFN 207

Query: 571 RFL 573
             L
Sbjct: 208 SLL 210


>gi|146343621|ref|YP_001208669.1| permease [Bradyrhizobium sp. ORS278]
 gi|146196427|emb|CAL80454.1| Putative permease of the binding-protein-dependent transport system
           family [Bradyrhizobium sp. ORS278]
          Length = 247

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 11/202 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++    +  RV   + +     +P G  IG+     S   P      A P     PLV+
Sbjct: 47  LLYDIFASARRVFAGVTLGIAAAVPAGFLIGWYRPARSFADPLINFFRALPPIALIPLVI 106

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      L   +++ +   +  +  +  G S     +  VA +   T    +  +I
Sbjct: 107 VYFGV----DELAKLVILFYAAFFSGVIVMYEGVSQITPLYIRVAQTLGATELETFLKVI 162

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P+ +T    A G  W   + SE+ +         GLGA I  ++       + +G
Sbjct: 163 IPLTVPHILTALRVALGVTWATLVASELIA------AQRGLGATIQNASTYFLLDVIYVG 216

Query: 559 VLIMCCFVLALNRFLWHPLYLY 580
           ++ +    L ++  L   L  +
Sbjct: 217 IICIGAVALIMDTLL-RRLSAW 237



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 89/224 (39%), Gaps = 15/224 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P+ +       L  H L      +  R+ + + + +        L    R       P
Sbjct: 29  PSPQQVGARFVDLLLHHGLLYDIFASARRVFAGVTLGIAAAVPAGFLIGWYRPARSFADP 88

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +++  +++P +  +   +VYF           ELA +  +F +  ++    MY+ +  I 
Sbjct: 89  LINFFRALPPIALIPLVIVYFGVD--------ELAKLVILFYAAFFSGVIVMYEGVSQIT 140

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V+++   +  + F  + +P ++P ++  + +++   W  +VASE+I         
Sbjct: 141 PLYIRVAQTLGATELETFLKVIIPLTVPHILTALRVALGVTWATLVASELIA------AQ 194

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            G+G+ I  A     L  I   ++ +  V  + D LL R +  W
Sbjct: 195 RGLGATIQNASTYFLLDVIYVGIICIGAVALIMDTLL-RRLSAW 237


>gi|134295634|ref|YP_001119369.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134138791|gb|ABO54534.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 269

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ +R +    I   + + +G+  G        +    Q++   PA    PLV+      
Sbjct: 71  VSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGI- 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + I  N   G  +   +  E+A S+ + G+  +R +IL G  P
Sbjct: 130 ---DEKAKLFLVALGVFFPIYINTYHGIRSVDANLIEMAKSYGVRGFALYRDVILLGALP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   IV+E  S        +G+G     + E      VV+G+L+   
Sbjct: 187 SILVGVRFALGLMWVMLIVAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAV 240

Query: 565 FVLALNRF 572
                +  
Sbjct: 241 LGKLADVL 248



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 86/233 (36%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    +      +T R L    I              S+   + L 
Sbjct: 46  LPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALD 105

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F           E A +F +     + +  + Y  + ++
Sbjct: 106 STIQMIRNIPALAMIPLVILWFGID--------EKAKLFLVALGVFFPIYINTYHGIRSV 157

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E+++S+ + G+  +  + +  ++P ++  +  ++   W  ++ +E I        
Sbjct: 158 DANLIEMAKSYGVRGFALYRDVILLGALPSILVGVRFALGLMWVMLIVAETIS------A 211

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      ++  +L    +  L D L   + R  + W   ++
Sbjct: 212 QSGIGYMTMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQ 264


>gi|293607018|ref|ZP_06689362.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814615|gb|EFF73752.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 264

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   V+   I +I  +  G+W+G  P  S+ + P+ +   + P  +  P+        
Sbjct: 66  VTLTETVLAFFIGTIAGLAFGLWLGLSPRASAILDPYIKAANSMPRVILAPIFGMWFGLG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G         + A        +  R++ LP    
Sbjct: 126 IWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGARKRQLLRHVYLPSATS 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++  
Sbjct: 182 WVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIVVLTA 235

Query: 565 FVLALNRFL 573
           F L L+  +
Sbjct: 236 FALVLDYIV 244



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + A  I  +    +      S R   +L P +    S+P +       ++F
Sbjct: 63  HLWVTLTETVLAFFIGTIAGLAFGLWLGLSPRASAILDPYIKAANSMPRVILAPIFGMWF 122

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   L + +R       Q   ++
Sbjct: 123 GLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLDNARMLGARKRQLLRHV 174

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 175 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGYLILQAEGTFDVNTVFA 228

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 229 GIVVLTAFALVLDYIVGIGEKRLMKWQPK 257


>gi|126732156|ref|ZP_01747958.1| putative glycine betaine transport system permease abc transporter
           protein [Sagittula stellata E-37]
 gi|126707445|gb|EBA06509.1| putative glycine betaine transport system permease abc transporter
           protein [Sagittula stellata E-37]
          Length = 277

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 93/234 (39%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L++ +I +L    + +           + +      +  + T   +++A V+ +     
Sbjct: 54  LLIVALITLLSWFARRSVGFTIFTAAGLLLIINQGYWEETTETLALVIAAAVVCMGVGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+   L   L P+LD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 VGIAAARRPWLYNALSPVLDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                    +  + + P  L E   +F  +  Q  + + +P++MP ++  +  ++     
Sbjct: 171 -----IRLTHLGITSTPTALIEAGEAFGATRRQLLYKVELPYAMPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G     A+   ++       + ++ V  ++D++ 
Sbjct: 226 MVVIAALV-------GADGLGVPTLRALNSVNIAQGFEVGIAIVLVAIIFDRMF 272



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 11/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+   ++   + +PVGI    RP + + + P   L+   P  V+    +       
Sbjct: 96  TLALVIAAAVVCMGVGVPVGIAAARRPWLYNALSPVLDLMQTIPTFVYLIPALILFGLGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G ++ P    E   +F  T  +    + LP   P 
Sbjct: 156 VPGLIATVIFAIPA---PIRL-THLGITSTPTALIEAGEAFGATRRQLLYKVELPYAMPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG     +    +  +     + +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------ADGLGVPTLRALNSVNIAQGFEVGIAIVLV 264

Query: 566 VLALNRFLWHP 576
            +  +R     
Sbjct: 265 AIIFDRMFKKR 275


>gi|91780200|ref|YP_555407.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692860|gb|ABE36057.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 293

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 96/237 (40%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A  L   +  + L        P  ++          +L +  S +  R  S  VI  +
Sbjct: 53  LVAIALWSAVSALHLVKSGLLVSPLAVLQTGWQQTVSGALLRALSASLAREASGFVIGTV 112

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  +L   SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 113 GGLLLGSLLGFSRLARRMVGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALL- 171

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T      +  +PR   EV+R+FR S  Q   ++ +P ++P +   + +++ 
Sbjct: 172 -------PVTAHTCDGIHAVPRSYVEVARAFRYSRLQLIAHVILPAALPSIFTGIYLALI 224

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +    +  + L
Sbjct: 225 YSWLATLGAEYLLVSGS-----GIGNLLIDGSEQFRMDLVLFGIIVVGLTGWALNAL 276



 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 83/245 (33%), Gaps = 11/245 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCITM 387
                     +  +    W  V     +          V    +Q  +   ++     ++
Sbjct: 41  RRGAAWRGVLLPLVAIALWSAVSALHLVKSGLLVSPLAVLQTGWQQTVSGALLRALSASL 100

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R     +I ++  + +G  +GF       + P            + PL+          
Sbjct: 101 AREASGFVIGTVGGLLLGSLLGFSRLARRMVGPSFDTFKQISLFAWIPLISVWFGLGDAA 160

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             ++LS          +  +   G  A P  + EVA +F  +  +   ++ILP   P   
Sbjct: 161 KVVFLS----LAALLPVTAHTCDGIHAVPRSYVEVARAFRYSRLQLIAHVILPAALPSIF 216

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   A   +W A++ +E        +  +G+G  + + +E+     V+ G++++     
Sbjct: 217 TGIYLALIYSWLATLGAEYLL-----VSGSGIGNLLIDGSEQFRMDLVLFGIIVVGLTGW 271

Query: 568 ALNRF 572
           ALN  
Sbjct: 272 ALNAL 276


>gi|282895766|ref|ZP_06303853.1| ABC transporter, permease protein [Raphidiopsis brookii D9]
 gi|281199266|gb|EFA74132.1| ABC transporter, permease protein [Raphidiopsis brookii D9]
          Length = 269

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 15/243 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRV 390
           N+ +     + +F +   +A+      +       T Q ++  ++ G        T+ R 
Sbjct: 23  NRCLPLTGVLLFFGLWWFIAVSGFVNPVLLPTPLATVQTLIEGLFGGSMFSDLATTVLRT 82

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                +A++  IP+G+ +G    I   ++   +   + PA+   PL +        +  +
Sbjct: 83  FSAFFLATLFGIPLGVGLGSSEKIYRSVEFLIEFFRSTPASALIPLFILFFGISDFSKVV 142

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                  F     I+FN   G           A       W+ ++ ++L    P    G 
Sbjct: 143 IAG----FSAFLLIIFNSAYGVIHAKQSRILAARVMGANRWQIFKDVLLLESLPQTFIGL 198

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +    A    IVSE+           GLG  I ++ +  +  ++   +LI       LN
Sbjct: 199 RSGISIALVIVIVSEMFIGSQQ-----GLGKRIIDAQQILNVRDMYASILITGSLGYLLN 253

Query: 571 RFL 573
              
Sbjct: 254 MLF 256



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F L  F+ V G +N +L        P   V  +   L   S+    + T LR  SA  +
Sbjct: 34  FFGLWWFIAVSGFVNPVL-----LPTPLATVQTLIEGLFGGSMFSDLATTVLRTFSAFFL 88

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + LF          S ++   +  +++  +S P    +   +++F      KV+ A  +A
Sbjct: 89  ATLFGIPLGVGLGSSEKIYRSVEFLIEFFRSTPASALIPLFILFFGISDFSKVVIAGFSA 148

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I         F+    + +  +     +R    + WQ F  + +  S+P     +  
Sbjct: 149 FLLII--------FNSAYGVIHAKQSRILAARVMGANRWQIFKDVLLLESLPQTFIGLRS 200

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S     V+ SEM +         G+G  I  A +  ++  +  ++L    + +L + L
Sbjct: 201 GISIALVIVIVSEMFIGSQQ-----GLGKRIIDAQQILNVRDMYASILITGSLGYLLNML 255

Query: 259 LF---RPMIVWSNK 269
                + +I WS K
Sbjct: 256 FLGLEKRLIHWSGK 269


>gi|94990479|ref|YP_598579.1| glycine betaine transport system permease protein / glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS10270]
 gi|94543987|gb|ABF34035.1| Glycine betaine transport system permease protein / Glycine
           betaine-binding protein [Streptococcus pyogenes
           MGAS10270]
          Length = 520

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I+LL     A L ++S+R   +++ +  + Q+IP L  L         L+   + 
Sbjct: 39  LLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALL--------GLFIPLMG 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  I   L E   +F ++ W++     +P +MP +
Sbjct: 91  IGTLPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S          + +I  G       G+GS+I L I   +   IL   ++   + 
Sbjct: 151 MSGVRTSAVMIIGTATLASLIGAG-------GLGSFILLGIDRNNANLILIGAISSALLA 203

Query: 253 FLYDQLL 259
            +++ LL
Sbjct: 204 IIFNSLL 210



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRP 412
           + +   +  +  + + F      +  WL  +   +   ++ ++IA +I +P+   +    
Sbjct: 1   MLLWSIYLEVMSMPSLFVTFQNRFNEWLAALGEHLQISLLSLMIALLIGVPLAALLSRSK 60

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             S  +     +    P+     L +  +    L     L +  IF     IL N I G 
Sbjct: 61  RWSDIMLQVTGVFQTIPSLALLGLFIPLMGIGTLPAVTALVIYAIF----PILQNTITGL 116

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +       E   +F +T W   +   +P   P  ++G  T+       + ++ +   G  
Sbjct: 117 NGIDPSLVEAGIAFGMTKWERLKTFEIPIAMPVIMSGVRTSAVMIIGTATLASLIGAG-- 174

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG++I    ++ +   +++G +      +  N  L
Sbjct: 175 -----GLGSFILLGIDRNNANLILIGAISSALLAIIFNSLL 210


>gi|297583598|ref|YP_003699378.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297142055|gb|ADH98812.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 255

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 102/241 (42%), Gaps = 17/241 (7%)

Query: 22  LLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79
            L  +++   +  +     +    P   ++ + I L +   L Q  + +  R++    ++
Sbjct: 11  FLGMIVIWEAVYRVYAQQTQMFPSPFGSLEQLYIGLFETGILTQALTESLQRIVIGFTLA 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           LL   +   L   S+     L  ++  +QS+P + +L   +V F         G E A  
Sbjct: 71  LLIGGLLGILIGVSKIADETLGSLVIALQSVPSIVWLPLALVMFQ--------GGEGAIY 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +     W MT +M   + N+   L   +++   S  +  W + +P S+P ++    ++
Sbjct: 123 FVVILGGTWAMTMNMRMGIKNVSPILIRAAKTMGYSQTEIVWKVMLPASVPSILTGARLA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            + GW  ++A+E+I  G       G+G  +  A    ++  ++  M+ +  +  + + L+
Sbjct: 183 WAFGWRALMAAELIGRG-------GLGRTLMDARDFFNMELVVAIMIIISTIGLIVEYLI 235

Query: 260 F 260
           F
Sbjct: 236 F 236



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +   +      ++ R+V+   +A +I   +GI IG        +      L + P+
Sbjct: 44  IGLFETGILTQALTESLQRIVIGFTLALLIGGLLGILIGVSKIADETLGSLVIALQSVPS 103

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+ PL +             +  ++I G  W +  N+  G           A +   + 
Sbjct: 104 IVWLPLALVMFQGGEG----AIYFVVILGGTWAMTMNMRMGIKNVSPILIRAAKTMGYSQ 159

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LP   P  +TGA  A    W A + +E+   G       GLG  + ++ +  
Sbjct: 160 TEIVWKVMLPASVPSILTGARLAWAFGWRALMAAELIGRG-------GLGRTLMDARDFF 212

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574
           +   VV  ++I+    L +   ++
Sbjct: 213 NMELVVAIMIIISTIGLIVEYLIF 236


>gi|219667414|ref|YP_002457849.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219537674|gb|ACL19413.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 338

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L IF +  +    + + +      + +   +D + ++     ++  +        I+ +
Sbjct: 102 LLIIFDYLTLKTGKLPLPYFPWPDKILNAIIEDRVLLLDCIRNSLILLFTGYFFGGIVGL 161

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G+  G+   +   + P  ++L   P+  + P+V+   S            L+  G  +
Sbjct: 162 ITGVTAGWSKKVHYWVMPIIKILGPIPSTTWLPIVLIIASSLFKG----SVFLIALGVWY 217

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    + G +     + EVA +      R    + LP   P    G       A    +
Sbjct: 218 PVTIATLTGVANVRKSYFEVARTLGARQRRLVFKVALPAAMPNIFQGLTQGMSVACTTLM 277

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI        F ++   V+++C     +N  L
Sbjct: 278 VAEMMG------VESGLGWYINWQKGWAEFGKMYAAVIVICLTFTVVNIVL 322



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 95/250 (38%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   +++   + +    +     P     +  I  D   L      + + + +      +
Sbjct: 99  VFILLIIFDYLTLKTGKLPLPYFPWPDKILNAIIEDRVLLLDCIRNSLILLFTGYFFGGI 158

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A  S+++   ++PI+ I+  IP   +L   ++   +L+ G        ++F 
Sbjct: 159 VGLITGVTAGWSKKVHYWVMPIIKILGPIPSTTWLPIVLIIASSLFKG--------SVFL 210

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T +    + N+ +   EV+R+      +  + + +P +MP +   +   MS
Sbjct: 211 IALGVWYPVTIATLTGVANVRKSYFEVARTLGARQRRLVFKVALPAAMPNIFQGLTQGMS 270

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
                ++ +EM+ V        G+G YI       +   +  A++ +     + + +L  
Sbjct: 271 VACTTLMVAEMMGVES------GLGWYINWQKGWAEFGKMYAAVIVICLTFTVVNIVLTQ 324

Query: 261 --RPMIVWSN 268
             + ++ W  
Sbjct: 325 VKKRVLRWQE 334


>gi|203287609|ref|YP_002222624.1| glycine betaine/L-proline transport system permease protein
           [Borrelia recurrentis A1]
 gi|201084829|gb|ACH94403.1| glycine betaine/L-proline transport system permease protein
           [Borrelia recurrentis A1]
          Length = 299

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 87/207 (42%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + +  T   +  ++  S+L+  +   L     +  + L P+LD+MQ++P   +L   +
Sbjct: 84  LWEVSMDTISLIFVSVFFSVLWGILIGILGGYCTKFYVFLKPLLDLMQAMPPFVYLIPAI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F             +AIFA     +  +       +  +P ++ E ++SF  S  +  
Sbjct: 144 SFFDTG--------TSSAIFATIIFAMPPVIRYTRLGIIQVPSEVIEAAKSFGSSSARIL 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++  ++  +  S+      +V + M+          G+G  +  +++      
Sbjct: 196 FQIQLPLALQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSVERLHFAE 248

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L + L ++ +  + D+++    I +S
Sbjct: 249 GLISGLAVVIIAIILDRIMQAIFIKFS 275



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + V +  + +  I +GI  G+       ++P   L+ A P  V+    +  +S++ 
Sbjct: 91  TISLIFVSVFFSVLWGILIGILGGYCTKFYVFLKPLLDLMQAMPPFVYL---IPAISFFD 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +   +IF     ++     G    P++  E A SF  +  R    I LP     
Sbjct: 148 TGTSSAIFATIIF-AMPPVIRYTRLGIIQVPSEVIEAAKSFGSSSARILFQIQLPLALQS 206

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A +  +++ +         ++GLG  +  S E+  F E ++  L +   
Sbjct: 207 IIEGINQSIMMAISMIVIAAMVG-------SSGLGRTVIYSVERLHFAEGLISGLAVVII 259

Query: 566 VLALNRFL 573
            + L+R +
Sbjct: 260 AIILDRIM 267


>gi|83748554|ref|ZP_00945574.1| Alkanesulfonates transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|207743309|ref|YP_002259701.1| aliphatic sulfonates transmembrane protein [Ralstonia solanacearum
           IPO1609]
 gi|83724762|gb|EAP71920.1| Alkanesulfonates transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|206594706|emb|CAQ61633.1| aliphatic sulfonates transmembrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 268

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 17/263 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR+ P +  L   V             +    P D+            L ++ + +T R
Sbjct: 17  GRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAVELARSGELWRHVAVSTWR 76

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    I          L    R    +L   L ++++IP+L  +   +++F        
Sbjct: 77  ALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGID----- 131

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + +P ++P 
Sbjct: 132 ---ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVSLPGALPQ 188

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E +          GIG     A +      +L  +L    +
Sbjct: 189 ILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLGILLYALL 242

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             L D L   L R  + W   ++
Sbjct: 243 GKLADLLSRALERFWLRWHPGYQ 265



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 75/242 (30%), Gaps = 17/242 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS-------IGYIVNHFTY 373
              +           + +R+   L      V    +    W S       +    +    
Sbjct: 1   MASKLKSKSKTFLNAAGRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAVEL 60

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     ++ +R ++   I   + + +G+  G      + +    Q++   P    
Sbjct: 61  ARSGELWRHVAVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLAL 120

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PLV+                L+  G  + I  N   G  +      E+A S+ ++  + 
Sbjct: 121 IPLVILWFGI----DESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQL 176

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R + LPG  P  + G   + G  W   IV+E  S         G+G     + E     
Sbjct: 177 YREVSLPGALPQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTD 230

Query: 554 EV 555
            V
Sbjct: 231 VV 232


>gi|302554022|ref|ZP_07306364.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471640|gb|EFL34733.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 287

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T  RV+    + +     +G+ +G  P + + ++P    L   P     P+ ++     
Sbjct: 89  ATTRRVLAGYAVGTAAGYLLGLLMGSLPLVRAALEPLLDALYVVPKLALLPVFLNMFGLG 148

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  ++  + F    ++  + ++   A P+  ++    F  + W+ +R+++LP   P
Sbjct: 149 EGPQVALVAATVFF----FVWISTMSAVMAVPDGHRDAGRVFGASPWQMFRHVLLPASLP 204

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + GA  A G A    + SE  +       + GLG  I +S        + +G++ +  
Sbjct: 205 AVLVGARIAAGVAVLVIVASEQIA------ASDGLGHLIFDSRALFQNDVMFVGIVCVAV 258

Query: 565 FVLALNRFL 573
             +  +  +
Sbjct: 259 LGVLFSELV 267



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 86/251 (34%), Gaps = 18/251 (7%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              VL+  +         +    P  I+           L      TT R+L+   +   
Sbjct: 44  ALLVLLWQLAAARGWIDERVYPAPSTILVDGWDRAAAGDLWPDVWATTRRVLAGYAVGTA 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             ++   L      +   L P+LD +  +P L  L   +  F      +V        F 
Sbjct: 104 AGYLLGLLMGSLPLVRAALEPLLDALYVVPKLALLPVFLNMFGLGEGPQVALVAATVFFF 163

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          S   ++  +P    +  R F  S WQ F ++ +P S+P ++    ++  
Sbjct: 164 V--------WISTMSAVMAVPDGHRDAGRVFGASPWQMFRHVLLPASLPAVLVGARIAAG 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
                +VASE I   D      G+G  I  +        +   ++ +  +  L+ +L+  
Sbjct: 216 VAVLVIVASEQIAASD------GLGHLIFDSRALFQNDVMFVGIVCVAVLGVLFSELVRF 269

Query: 260 -FRPMIVWSNK 269
             R +  W+ +
Sbjct: 270 AGRLLTPWAPR 280


>gi|257452130|ref|ZP_05617429.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Fusobacterium sp. 3_1_5R]
 gi|317058675|ref|ZP_07923160.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium sp. 3_1_5R]
 gi|313684351|gb|EFS21186.1| binding-protein-dependent transport system inner membrane component
           [Fusobacterium sp. 3_1_5R]
          Length = 251

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 91/231 (39%), Gaps = 11/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIAS 398
             + + +FW+C+   +   +    +  +   FT       IW+   ++++RV++ I++ +
Sbjct: 10  AIFEIFLFWYCMSIVLKKDLLPNPMITLETTFTLLITSSRIWIHILVSLYRVMLGILLGT 69

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  IP+GI +G+   I          L   P  VF P+    +    L+    ++ ++ F
Sbjct: 70  VFSIPMGILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFF 129

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
             Q  IL            +  +       + W+  ++++ P       T   ++ G ++
Sbjct: 130 --QQTILI--RDNVKNISEEIYDSIRILQASFWQIIQHVVFPSCLSGIFTSVKSSLGISF 185

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               ++E           +GLG +I +  ++  +  +   +LI+      L
Sbjct: 186 ALLFITE------NFASQSGLGYFITKCMDRRDYVTMYAAILILAILGCIL 230



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 98/257 (38%), Gaps = 17/257 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++   I  +    L    ++I+L           +     + +    +  +   +  R+
Sbjct: 2   KKLSKKIIAIFEIFLFWYCMSIVLKKDLLPNPMITLETTFTLLITSSRIWIHILVSLYRV 61

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  +++  +F+     L   S+R+        D +  IP + FL     +F+ L  G   
Sbjct: 62  MLGILLGTVFSIPMGILLGYSKRIEKYFGEAFDFLYMIPKIVFLPI---FFVLLGIG--- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L+ I  I T   +  T  +  ++ NI  ++ +  R  + S WQ   ++  P  + G+
Sbjct: 116 --DLSKIALIATVLFFQQTILIRDNVKNISEEIYDSIRILQASFWQIIQHVVFPSCLSGI 173

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++  S+   +  +  +E            G+G +I   +  +D + +  A+L +  + 
Sbjct: 174 FTSVKSSLGISFALLFITENFA------SQSGLGYFITKCMDRRDYVTMYAAILILAILG 227

Query: 253 FLYDQ---LLFRPMIVW 266
            +       L R +  W
Sbjct: 228 CILYTIFCFLERKICKW 244


>gi|170782394|ref|YP_001710727.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169156963|emb|CAQ02132.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 291

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 103/253 (40%), Gaps = 18/253 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGI----QETTVPRDIVDIVPITLDVHSLPQYAS 66
             R +      L+   +V+G+  ++             P D+V       +   L QY +
Sbjct: 41  TGRSLLRVAMGLVVPAIVVGLWVVVTATGVVPPHLLPAPLDMVRAGVQLAEQGILGQYVA 100

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+L    +      V   +   SR   ++L P     +++P L ++   +++    
Sbjct: 101 ISLQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTAGAFRTVPSLAWVPLLLLWMGIN 160

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV    + A+F ++T+        +  +L ++   L E  R+F L+       + +P
Sbjct: 161 EDSKVTLVAIGALFPVYTT--------VAGALRHVDPHLVEAGRAFGLTRIPLLVTVQLP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P +V  + ++++  W F+VA+E++          G+G  +  +     +  +L A++
Sbjct: 213 AVLPAVVSGLRLALAQSWLFLVAAELLAAS------MGLGYLLTESSANGRVDRVLLAIV 266

Query: 247 TMLGVIFLYDQLL 259
            +  +  + D ++
Sbjct: 267 LLAVLGAVTDAVV 279



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 89/277 (32%), Gaps = 19/277 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYI 367
           ++                  + L++     V  ++   W  V     +   +    +  +
Sbjct: 24  TDVAGGASVARPASGRATGRSLLRVAMGLVVPAIVVGLWVVVTATGVVPPHLLPAPLDMV 83

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                  +   +     I++ RV++   + + + + +G  +G        + P A     
Sbjct: 84  RAGVQLAEQGILGQYVAISLQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTAGAFRT 143

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+  + PL++  +     +       L+  G  + +   V            E   +F 
Sbjct: 144 VPSLAWVPLLLLWMGINEDSK----VTLVAIGALFPVYTTVAGALRHVDPHLVEAGRAFG 199

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T       + LP + P  V+G   A   +W   + +E+ +       + GLG  + ES+
Sbjct: 200 LTRIPLLVTVQLPAVLPAVVSGLRLALAQSWLFLVAAELLA------ASMGLGYLLTESS 253

Query: 548 EKGSFPEVVLGV-------LIMCCFVLALNRFLWHPL 577
             G    V+L +        +    V  + R L    
Sbjct: 254 ANGRVDRVLLAIVLLAVLGAVTDAVVGLVERVLVRRW 290


>gi|163758586|ref|ZP_02165673.1| ABC transporter permease [Hoeflea phototrophica DFL-43]
 gi|162283876|gb|EDQ34160.1| ABC transporter permease [Hoeflea phototrophica DFL-43]
          Length = 284

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V+ +I ++   IQ++      + +  + +    L +    T + ++SA  +S+     
Sbjct: 58  LIVVAVIALIGWRIQKSWKLALGIVLGLVFIINQDLWKETVETLVLVISAAFMSMAIGVP 117

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A   +L   + PILD+MQ++P   +L   ++ F        +G     +  I  +
Sbjct: 118 IGIWLAHRPKLYAYIQPILDLMQTMPTFVYLIPVLILFG-------LGLAPGLLVTIIFA 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +    Y  + ++P+ + E  ++F  S  Q    + +P ++P ++  +   +     
Sbjct: 171 SPAPIRL-TYLGITSVPKPMIEAGQAFGASPGQLLRKVELPAALPTIMAGLTQCIMLSLS 229

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + +I          G+G  +  A+   ++   L A + ++ +  + D++
Sbjct: 230 MVVIAALIGAN-------GLGKPVVRALNTVNIPLGLEAGIAIVILAIILDRI 275



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 11/210 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +     + G  I  +W+    IV    +     +      T+  V+    ++  I +P
Sbjct: 58  LIVVAVIALIGWRIQKSWKLALGIVLGLVFIINQDLWKETVETLVLVISAAFMSMAIGVP 117

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW+  RP + + IQP   L+   P  V+    +  +  + L     L + +IF +   
Sbjct: 118 IGIWLAHRPKLYAYIQPILDLMQTMPTFVYL---IPVLILFGLGLAPGLLVTIIFASPAP 174

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G ++ P    E   +F  +  +  R + LP   P  + G       + +  ++
Sbjct: 175 IRL-TYLGITSVPKPMIEAGQAFGASPGQLLRKVELPAALPTIMAGLTQCIMLSLSMVVI 233

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           + +           GLG  +  +    + P
Sbjct: 234 AALIG-------ANGLGKPVVRALNTVNIP 256


>gi|288906109|ref|YP_003431331.1| ABC transporter permease [Streptococcus gallolyticus UCN34]
 gi|288732835|emb|CBI14411.1| putative ABC transporter; permease protein [Streptococcus
           gallolyticus UCN34]
          Length = 257

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 12/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAW--QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +  +L IFW   V    I  ++       +    +      +     I+++R  V  +I 
Sbjct: 20  IPALLIIFWQIGVMAGWITSSFIPSPWSVLKQGVSLFKKGTLQENISISLYRASVGFVIG 79

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I   +G+  G             Q+L   P     P+V+  +             L+ 
Sbjct: 80  GGIGFLLGVINGVSRVARMTFDSTIQMLRNIPHLALIPVVILVLGIGET----AKISLVA 135

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            G  + +  N   G ++  +   E+  S+ ++  + +  II PG  P  + G   A G  
Sbjct: 136 VGCLFPMYINTYHGITSVDSHLVEMGKSYGLSRLQMFCKIIFPGAMPTILMGVRYALGVM 195

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           W   IV+E  S        +G+G     + +  +   + L +LI        +
Sbjct: 196 WTTLIVAETVS------ADSGIGYMSTNAQQFMNMKTIFLCILIYALLGKLSD 242



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 92/242 (38%), Gaps = 16/242 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            + + A +++   I ++   I  + +P    ++          +L +  S +  R     
Sbjct: 17  PWLIPALLIIFWQIGVMAGWITSSFIPSPWSVLKQGVSLFKKGTLQENISISLYRASVGF 76

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI     F+   +   SR   M     + ++++IP L  +   ++             E 
Sbjct: 77  VIGGGIGFLLGVINGVSRVARMTFDSTIQMLRNIPHLALIPVVILVLGIG--------ET 128

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A I  +    ++ M  + Y  + ++   L E+ +S+ LS  Q F  +  P +MP ++  +
Sbjct: 129 AKISLVAVGCLFPMYINTYHGITSVDSHLVEMGKSYGLSRLQMFCKIIFPGAMPTILMGV 188

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E +          GIG     A +  ++  I   +L    +  L D
Sbjct: 189 RYALGVMWTTLIVAETVSADS------GIGYMSTNAQQFMNMKTIFLCILIYALLGKLSD 242

Query: 257 QL 258
            +
Sbjct: 243 FI 244


>gi|325067514|ref|ZP_08126187.1| glycine betaine ABC transporter, permease protein [Actinomyces oris
           K20]
          Length = 292

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 85/194 (43%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T + +  A + +L+F       AA+++ + +++ P+LD+MQ++P   +L  +V++F 
Sbjct: 94  AMETLVLVTLATLTALVFAVPLGIWAARNKYVSVLIRPVLDLMQTMPAFVYLIPSVLFFS 153

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     IFA+               +  + ++  E  RSF  + WQ    + 
Sbjct: 154 ---IGVVPGMFATLIFAMPPG-----VRMTELGIKQVDKETVEAGRSFGATDWQILRGIQ 205

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +   +       V + M+          G+G  +  A+   D+     A
Sbjct: 206 LPLAVPTIMAGVNQVIMLALSMAVIAGMV-------GADGLGKEVVKALATIDIAKGTEA 258

Query: 245 MLTMLGVIFLYDQL 258
            L+++ +    D++
Sbjct: 259 GLSIVFLAIYLDRV 272



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 11/215 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +  +W+        F     L        T+  V +  + A +  +P+GIW     ++S 
Sbjct: 68  MAKSWRLAVGTAVTFLIIISLGQWVNAMETLVLVTLATLTALVFAVPLGIWAARNKYVSV 127

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I+P   L+   PA V+    V   S   +       +          +     G     
Sbjct: 128 LIRPVLDLMQTMPAFVYLIPSVLFFSIGVVPGMFATLIF----AMPPGVRMTELGIKQVD 183

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  E   SF  T W+  R I LP   P  + G       A + ++++ +          
Sbjct: 184 KETVEAGRSFGATDWQILRGIQLPLAVPTIMAGVNQVIMLALSMAVIAGMVG-------A 236

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            GLG  + ++       +     L +    + L+R
Sbjct: 237 DGLGKEVVKALATIDIAKGTEAGLSIVFLAIYLDR 271


>gi|188586238|ref|YP_001917783.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350925|gb|ACB85195.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 278

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 100/233 (42%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +VI ++  L   +    V    +    + + +  L +    T   +L+A +++L     
Sbjct: 57  FVVIILLAALAWRLSGLGVGIFTLLGFSLIVSMD-LWEPTMVTFSMILTAGIVALGLGIP 115

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA+K+  +  ++ P+LD MQ++P   +L   V++F     G V G     IFA+  +
Sbjct: 116 IGILASKNEVVNTIVRPVLDFMQTMPAFVYLIPAVIFFSL---GLVPGVIATVIFAMPPA 172

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + +++ E  R+F  +  Q  + + +P ++P ++  +  ++     
Sbjct: 173 -----IRLTNFGIRQVDKEVIEAGRAFGSTSSQLLFKVQLPLAVPTIMAGVNQTIMLSLS 227

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G+ +   I + D+       L+++ +    D++
Sbjct: 228 MVVIASMIGAG-------GLGNIVLRGITQLDIGTGFEGGLSVVILAIFLDRI 273



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 16/228 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404
            VV  +   +AW+  G  V  FT      ++ +       +T   ++   I+A  + IP+
Sbjct: 57  FVVIILLAALAWRLSGLGVGIFTLLGFSLIVSMDLWEPTMVTFSMILTAGIVALGLGIPI 116

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI       +++ ++P    +   PA V+    V   S   +   +   +  +       
Sbjct: 117 GILASKNEVVNTIVRPVLDFMQTMPAFVYLIPAVIFFSLGLVPGVIATVIFAMPPAIRLT 176

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            F    G      +  E   +F  T  +    + LP   P  + G       + +  +++
Sbjct: 177 NF----GIRQVDKEVIEAGRAFGSTSSQLLFKVQLPLAVPTIMAGVNQTIMLSLSMVVIA 232

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  +     +        G L +    + L+R 
Sbjct: 233 SMIGAG-------GLGNIVLRGITQLDIGTGFEGGLSVVILAIFLDRI 273


>gi|167841837|ref|ZP_02468521.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia thailandensis MSMB43]
          Length = 295

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 85/202 (42%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +   +L    + +LF FV  +LA  +R    VL  +  +   +P +  L  
Sbjct: 89  GELLVKTGISISVLLRGYALGVLFAFVLTSLAVSTRIGRDVLSMLTSMFNPLPSIALLPI 148

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  SMY     +P  L+   R++ L+G +
Sbjct: 149 ALLWFGLGTG--------SLLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGLR 200

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E   
Sbjct: 201 QIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYT 258

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +   +  ++ +  L + L+F
Sbjct: 259 DRVFAGLAAVIVIGLLVEHLVF 280



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 82/273 (30%), Gaps = 9/273 (3%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
             ++      + R      F +      +    +I    V   + +     ++   V   
Sbjct: 27  AAERATPAPLLRRIVGASGFRRAAIALVLIAAWEIVARIVANDLLVPTFGATLAAFVQGI 86

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              ++L    +    + R      +  +    +             +     +    P+ 
Sbjct: 87  ASGELLVKTGISISVLLR---GYALGVLFAFVLTSLAVSTRIGRDVLSMLTSMFNPLPSI 143

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P+ +        +    L  +++    W +  ++  G +  P   K    ++ +TG 
Sbjct: 144 ALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGL 199

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R    I++P   P  ++G       AW   I +E+           GLG YI ++  +  
Sbjct: 200 RQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELY 257

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
              V  G+  +    L +   ++  L     R 
Sbjct: 258 TDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 290


>gi|291295462|ref|YP_003506860.1| ABC transporter-like protein [Meiothermus ruber DSM 1279]
 gi|290470421|gb|ADD27840.1| ABC transporter related protein [Meiothermus ruber DSM 1279]
          Length = 488

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 94/289 (32%), Gaps = 14/289 (4%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            I   +    + L   +     T             ++     +  +  + W  +   V 
Sbjct: 212 RITAFTDGLEAELRERLGVADSTFIEPPPKPLRPPWEIFGVLGLGGLFFLIWSLLAARVP 271

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +   +         +  +L   W    T+    + I  + ++ +P+G  +G    +  
Sbjct: 272 LFVPSPAEVGRAMATNFPLLLQSAW---ATLEAAFLGIAGSLLLGLPLGYAMGRSRALER 328

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + PF   L A P  +  PL+V    Y   +     ++ +I  + + +L + + G     
Sbjct: 329 LLSPFIVALQAVPTIIIAPLLVIWFGYGLSSK----TITVILISIFPVLVSTMVGVREVD 384

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             ++EV  +   + W  +  +  PG  P  + G       A   ++V+E    G      
Sbjct: 385 RVYREVFQTMGASAWGVFSKLEFPGALPVVLGGLRLTVSLALIGAVVAEFVFGG------ 438

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL-WHPLYLYGTRC 584
            GLG           +      V +     +AL   + W   Y+   R 
Sbjct: 439 AGLGYLANSERLNFRYANAFAAVGVTVVLGIALYGLVAWLESYVLRYRR 487



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 83/241 (34%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF +L    +  +I  LL       VP        +  +   L Q A  T       +  
Sbjct: 249 IFGVLGLGGLFFLIWSLLAARVPLFVPSPAEVGRAMATNFPLLLQSAWATLEAAFLGIAG 308

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SLL          +SR L  +L P +  +Q++P +      V++F      K I   L +
Sbjct: 309 SLLLGLPLGYAMGRSRALERLLSPFIVALQAVPTIIIAPLLVIWFGYGLSSKTITVILIS 368

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF         +  S    +  + R   EV ++   S W  F  L  P ++P ++  + +
Sbjct: 369 IF--------PVLVSTMVGVREVDRVYREVFQTMGASAWGVFSKLEFPGALPVVLGGLRL 420

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++S      V +E +  G       G+G                 A+   + +      L
Sbjct: 421 TVSLALIGAVVAEFVFGGA------GLGYLANSERLNFRYANAFAAVGVTVVLGIALYGL 474

Query: 259 L 259
           +
Sbjct: 475 V 475


>gi|239820192|ref|YP_002947377.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239805045|gb|ACS22111.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 256

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 75/187 (40%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  RV + + +   + +PVG  +G+   + S + P      A P     PLV+     
Sbjct: 62  YMSTQRVFIGVALGVSLAVPVGFCLGWYRGLRSFMDPVINFFRALPPIALIPLVIVYFGI 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                    + ++ + + +  +  +  G +     + +VA +   +    +  +I+P   
Sbjct: 122 GEA----AKTAILFYASFFAGVIVMYEGIAQISPIYIKVARTLGASDVEIFGKVIVPLTI 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +T    A G AW   + SE+ +         GLGA I  ++       + +G++ + 
Sbjct: 178 PHILTAVRVALGVAWATLVASELIA------AQQGLGALIQNASSFFQLDIIYVGIICIG 231

Query: 564 CFVLALN 570
              L ++
Sbjct: 232 VIALVMD 238



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 89/243 (36%), Gaps = 14/243 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +   L  + +   I               +V    + L    L +    +T R+ 
Sbjct: 10  RALLIVAPWLLILALWYAIRASGLVNPALVPAPHMVLAKFVELSRGRLWEDIYMSTQRVF 69

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + + +             R L   + P+++  +++P +  +   +VYF          
Sbjct: 70  IGVALGVSLAVPVGFCLGWYRGLRSFMDPVINFFRALPPIALIPLVIVYFGIG------- 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A    +F +  +     MY+ +  I     +V+R+   S  + F  + VP ++P ++
Sbjct: 123 -EAAKTAILFYASFFAGVIVMYEGIAQISPIYIKVARTLGASDVEIFGKVIVPLTIPHIL 181

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++   W  +VASE+I          G+G+ I  A     L  I   ++ +  +  
Sbjct: 182 TAVRVALGVAWATLVASELIA------AQQGLGALIQNASSFFQLDIIYVGIICIGVIAL 235

Query: 254 LYD 256
           + D
Sbjct: 236 VMD 238


>gi|77461151|ref|YP_350658.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77385154|gb|ABA76667.1| putative ABC transport system permease protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 267

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 94/274 (34%), Gaps = 19/274 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI------GYIVNHF 371
           R   + R   P+  L +      S +  +    +  G++ G     +        +    
Sbjct: 4   RNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVEAAV 63

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +      ++  V+V  I++S++ +P+G+ +G    + + ++P    +   P  
Sbjct: 64  RLSRDGTLGQHVWASVEVVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYLPVT 123

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F PL +  +             ++IFG  +  L  +   +     D    + +      
Sbjct: 124 SFVPLFILWIGIGLEQ----RVSVIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRR 179

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               ++I P   P  +       G AW   +V+E+ +       ++GLG    ++     
Sbjct: 180 DAVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVA------ASSGLGYLSLKAMRGFQ 233

Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
              + L + I+    L  +   RFL   +  +  
Sbjct: 234 VDVIFLAIAIIGLLGLVTDQLFRFLRLRIAAWAQ 267



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 94/241 (39%), Gaps = 18/241 (7%)

Query: 23  LAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           LA+VL++G+   L +G          P  +V+         +L Q+   +   ++   ++
Sbjct: 29  LAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVEAAVRLSRDGTLGQHVWASVEVVMVGFIV 88

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S L       L    R +   L P+++ ++ +P+  F+   +++       +V       
Sbjct: 89  SSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYLPVTSFVPLFILWIGIGLEQRVS------ 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I     +     +      I +DL   S +   +      ++  P S+PG++  + +
Sbjct: 143 --VIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRRDAVLHVIAPASLPGVLDTLRV 200

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +M   W ++V +E++          G+G     A++   +  I  A+  +  +  + DQL
Sbjct: 201 TMGWAWTYLVVAELVAASS------GLGYLSLKAMRGFQVDVIFLAIAIIGLLGLVTDQL 254

Query: 259 L 259
            
Sbjct: 255 F 255


>gi|108804393|ref|YP_644330.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108765636|gb|ABG04518.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 288

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   +++A  ++L+       +AAKSR +  VL P+LD MQ++P   +L   +V
Sbjct: 91  WEDAMLTLALVIAATAVALVVGIPLGIVAAKSRDVETVLRPVLDFMQTMPAFVYLVPAIV 150

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                           A+ A+    +          L  + ++  E + +F  +GWQ   
Sbjct: 151 LLGLG--------AAPALVAVVIFAMPPAVRLTMLGLQQVSKETVEAASAFGATGWQTLR 202

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +   +      VV + +I  G       G+G  +   +   D+   
Sbjct: 203 KVELPLAMPTIMAGVNQVIMLSLSMVVIAALIGAG-------GLGEEVYQGLSRLDVGLS 255

Query: 242 LYAMLTMLGVIFLYDQL 258
               + ++ +  + D++
Sbjct: 256 FEGGIGIVIIAVILDRI 272



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 74/226 (32%), Gaps = 11/226 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
                     +   W+              L +     +T+  V+    +A ++ IP+GI
Sbjct: 58  VLGAFYGLAWLVSNWRIALLTAAGLLLLQGLRLWEDAMLTLALVIAATAVALVVGIPLGI 117

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  + + ++P    +   PA V+    +  +        + + +  +         
Sbjct: 118 VAAKSRDVETVLRPVLDFMQTMPAFVYLVPAIVLLGLGAAPALVAVVIFAMPPAVRL--- 174

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             + G      +  E AS+F  TGW+  R + LP   P  + G       + +  +++ +
Sbjct: 175 -TMLGLQQVSKETVEAASAFGATGWQTLRKVELPLAMPTIMAGVNQVIMLSLSMVVIAAL 233

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              G       GLG  + +   +        G + +    + L+R 
Sbjct: 234 IGAG-------GLGEEVYQGLSRLDVGLSFEGGIGIVIIAVILDRI 272


>gi|262200289|ref|YP_003271497.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262083636|gb|ACY19604.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 453

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 27/312 (8%)

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
           +   P+ S +     +      + + +    +  +       R             L   
Sbjct: 136 SPPPPSGSAIRRPLHRVRRAD-LRHPARRMMTTATETSAITTRRAETPAARRDSAPLPTA 194

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV------------------NHFTYQDVL 377
            ++RV  +L      ++       AW ++ Y++                  +      V 
Sbjct: 195 RHRRVKAVLRYGLPPILSFTVGIAAWYAVTYLILAEHRRFLLPPPHEVLTDSLLDPAHVG 254

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    +T    +V  + A+ I + +G+ +     +   I P+A +L   P     PL+
Sbjct: 255 PMLEALAVTAKVCLVGFVFAAAIGVTIGVVMSRGSFLERAIYPWAVVLQVIPVLAIVPLI 314

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                Y      +  +++ +    + I+ N   G  +      E+ +    +  +    +
Sbjct: 315 GLWFGYG----MVARTIVCVIIAIFPIIANTHFGLVSVDKASHELFTLAKASPLQRLMKL 370

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   P  +TG  TA G     +I+ ++           G+G  +     +    +++ 
Sbjct: 371 EFPSALPSMMTGFRTASGLVVVGAIIGDMF----FAKGQPGIGTLLDIYRARLQSDDLIA 426

Query: 558 GVLIMCCFVLAL 569
            +++   F +A+
Sbjct: 427 AIVLASIFGIAV 438



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 87/261 (33%), Gaps = 23/261 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTT 69
           R   P I      +     +  L+           P +++    +          A   T
Sbjct: 204 RYGLPPILSFTVGIAAWYAVTYLILAEHRRFLLPPPHEVLTDSLLDPAHVGPMLEALAVT 263

Query: 70  LRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            ++ L   V +         + ++   L   + P   ++Q IP+L  +    ++F     
Sbjct: 264 AKVCLVGFVFAAAIGVTIGVVMSRGSFLERAIYPWAVVLQVIPVLAIVPLIGLWFGYGMV 323

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            + I   + AIF         +  + +  L ++ +   E+    + S  Q+   L  P +
Sbjct: 324 ARTIVCVIIAIF--------PIIANTHFGLVSVDKASHELFTLAKASPLQRLMKLEFPSA 375

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--- 245
           +P ++     +       VV   +I         PGIG+ + +         ++ A+   
Sbjct: 376 LPSMMTGFRTASGL----VVVGAIIGDMFFAKGQPGIGTLLDIYRARLQSDDLIAAIVLA 431

Query: 246 ----LTMLGVIFLYDQLLFRP 262
               + + G+  + + L+ R 
Sbjct: 432 SIFGIAVFGIFSVLNALVNRR 452


>gi|218677783|ref|ZP_03525680.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CIAT 894]
          Length = 258

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L+A  + ++        AA+   +   + P+LD+MQ+IP   +L   ++
Sbjct: 67  WKETTETLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPVLDLMQTIPTFVYLIPALI 126

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI               + + P  L E + +F     Q   
Sbjct: 127 LFGL---GMVPGLIATVIFAIPAP-----IRLTRLGIISTPPSLVEAAVAFGARPMQVLR 178

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +PF+ P ++  +  ++      VV + ++         PG+G  +  A+   ++   
Sbjct: 179 KVELPFAAPQIMAGLTQTIMLSLSMVVIAALV-------GAPGLGVPVVRALNTVNIAKG 231

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ +  + D++ 
Sbjct: 232 FDAGFCIVILAIILDRIF 249



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  +I IP+GI    RP + + ++P   L+   P  V+    +       
Sbjct: 73  TLALVLAATFVCMVIGIPLGIAAARRPWVYAAMRPVLDLMQTIPTFVYLIPALILFGLGM 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G  + P    E A +F     +  R + LP   P 
Sbjct: 133 VPGLIATVIFAIPA---PIRL-TRLGIISTPPSLVEAAVAFGARPMQVLRKVELPFAAPQ 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +  +       +   
Sbjct: 189 IMAGLTQTIMLSLSMVVIAALVG-------APGLGVPVVRALNTVNIAKGFDAGFCIVIL 241

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 242 AIILDRIF 249


>gi|148258445|ref|YP_001243030.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410618|gb|ABQ39124.1| Putative ABC transporter permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 286

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 92/283 (32%), Gaps = 23/283 (8%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
               +L       R   P     +   +R        W  V+  +       ++  +   
Sbjct: 6   EAAGRLGLGALSKRSPGPARPGVVLLARRYFTSRAFGWSIVLLALGAWQIASTLHRMPQL 65

Query: 371 FTYQDVLYV----------IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
               D+  V          +     T+   V+    A++  + +G  +G  P +    +P
Sbjct: 66  PPLTDIGAVWLDRVQNGDLVAAVLETLRITVIGYAFATVTGVVLGFLMGRVPVVWGGAEP 125

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             ++L   P     PL++  +         +  ++++    + IL N  AGA +      
Sbjct: 126 VVEILRQIPITALLPLLILYLGIGDS----FKIVIVMLAATFPILLNSYAGARSISKTMA 181

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A +F +   +    I LP   PY + G   A       ++V+ + +        +G+G
Sbjct: 182 MTAQTFQLNWIQTQIEIGLPAALPYILVGMRQALAVTLVIAVVTGMLAG------NSGIG 235

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLY 580
            +I E+ +      +  G+  +      LN         L  +
Sbjct: 236 YFILEAQQVLDVKALFAGIFTIAAIGYVLNALFLMVEQRLTRW 278



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 103/263 (39%), Gaps = 20/263 (7%)

Query: 10  FISRRIFPNI---FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            ++RR F +    + ++   L    I   LH + +     DI  +    +    L     
Sbjct: 30  LLARRYFTSRAFGWSIVLLALGAWQIASTLHRMPQLPPLTDIGAVWLDRVQNGDLVAAVL 89

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    +     + +   V   L  +   +     P+++I++ IPI   L   ++Y    
Sbjct: 90  ETLRITVIGYAFATVTGVVLGFLMGRVPVVWGGAEPVVEILRQIPITALLPLLILYLGIG 149

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K++   LAA F         +  + Y    +I + +   +++F+L+  Q    +G+P
Sbjct: 150 DSFKIVIVMLAATF--------PILLNSYAGARSISKTMAMTAQTFQLNWIQTQIEIGLP 201

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  M  +++      V + M+          GIG +I  A +  D+ A+   + 
Sbjct: 202 AALPYILVGMRQALAVTLVIAVVTGMLAGNS------GIGYFILEAQQVLDVKALFAGIF 255

Query: 247 TMLGVIFLYDQLLF---RPMIVW 266
           T+  + ++ + L     + +  W
Sbjct: 256 TIAAIGYVLNALFLMVEQRLTRW 278


>gi|188584086|ref|YP_001927531.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179347584|gb|ACB82996.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 333

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 75/208 (36%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    ++D   +      ++  +    +I + +   +G+ IG+   +     P  + +  
Sbjct: 121 ILEVFWEDWPKLGGSILASLKLLAGGYLIGAGLGFGLGVAIGWSKAVGYWAHPVLRFVGP 180

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + PL          +     + L+   T + +     +G +     + +VA +  
Sbjct: 181 LPATAWLPLAFFVFP----SSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLG 236

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GG++   +V+E+          +GLG Y+  + 
Sbjct: 237 ASPGFLILRVAVPAALPHVFVGLFMGLGGSFAVLVVAEMLG------VKSGLGWYLQWAQ 290

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++  +   +++M      L   L+ 
Sbjct: 291 GWAAYANMYAALIVMALMCSGLITLLFR 318



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +   +    +I     F        S+ +G    P+L  +  +P   +L
Sbjct: 128 DWPKLGGSILASLKLLAGGYLIGAGLGFGLGVAIGWSKAVGYWAHPVLRFVGPLPATAWL 187

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 188 PLAFFVF--------PSSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLGASP 239

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 240 GFLILRVAVPAALPHVFVGLFMGLGGSFAVLVVAEMLGVKS------GLGWYLQWAQGWA 293

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A++ M  +      LLFR
Sbjct: 294 AYANMYAALIVMALMCSGLITLLFR 318


>gi|187922516|ref|YP_001894158.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187713710|gb|ACD14934.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 289

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 90/287 (31%), Gaps = 25/287 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + +  +             L       V   L +     +  +A  + W    ++    
Sbjct: 12  PLAQTGKRPRQTGRPVHGWRLPGEGPTAVLSALSVTTLAALWWLATHLHWLPPLFLPTPE 71

Query: 372 TYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
                    W G I            +  RV     +A++  +PVGI +G        + 
Sbjct: 72  AVWTAFLDAWHGRIQGGLPLSQHLAWSALRVFGAFALAALTAVPVGILMGVSRVARGLLD 131

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  +     P   + PLVV               +++       I     AG  +   + 
Sbjct: 132 PPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIYLACFAPIAMAARAGVRSATIEQ 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A S      +  R+++LP   P  +TG   A G  W   + +E+ +       T GL
Sbjct: 188 IHAAYSLGGRFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGL 241

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
           G  +  ++       VV+G++++       +   R L   L  +  R
Sbjct: 242 GQMVLNASSFLRTDVVVMGIVLIGLIAWLFDLGMRVLERRLVPWKGR 288



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 89/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+ + + LR+  A  ++ L       L   SR    +L P L+  + +P L +L   V
Sbjct: 91  LSQHLAWSALRVFGAFALAALTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S      Q  
Sbjct: 151 IWFGID--------ETAKIVVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGRFSQIV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 256

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + +L+D   ++L R ++ W  +
Sbjct: 257 VVMGIVLIGLIAWLFDLGMRVLERRLVPWKGR 288


>gi|15598708|ref|NP_252202.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9949659|gb|AAG06900.1|AE004771_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 258

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 85/221 (38%), Gaps = 10/221 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   + G+   +                   ++    IT   +VV   + +++ + +G+ 
Sbjct: 24  WGPGLLGMPEFVLPGLSRVAAEGVAMWHGAGLLEHTAITSLEIVVGFALGALLGVSIGVA 83

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G  P   + + P+   L   P   F PL V  + Y  + P + +++L++F   + ++ N
Sbjct: 84  LGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLGYT-VYPKILIAVLIVF---FPVMIN 139

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V++       D   +  +   + W+ +R +  P       +G   A   A     V E+ 
Sbjct: 140 VLSAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELV 199

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                     GLG  + ++  +G+   V + ++++    + 
Sbjct: 200 GGNK------GLGFLLVDAEGQGNTAGVFVAIVMLTLIGVL 234



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 19/211 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++ + T+L ++    +  L           S     +L P +  +Q  P + F   
Sbjct: 53  AGLLEHTAITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQIAPKVAFAPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++       K++ A L   F +          ++  ++  +  D+  + R+   S WQ
Sbjct: 113 FVMWLGYTVYPKILIAVLIVFFPVM--------INVLSAIRTVDPDMINLVRAMSASRWQ 164

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +  P +M  L   + ++ +     V   E++          G+G  +  A  + + 
Sbjct: 165 IFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVGGNK------GLGFLLVDAEGQGNT 218

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +  A++ +  +  L         +VW+ K
Sbjct: 219 AGVFVAIVMLTLIGVLAYGA-----VVWAEK 244


>gi|320534785|ref|ZP_08035206.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133006|gb|EFW25533.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 292

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 98/233 (42%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ +  ++    +   +         + + +    Q A  T + +  A + +L+F   
Sbjct: 56  LIMVVVFVLIAWMAKSWRLALGTAITFLVIISLGQ-WQNAMETLVLVTLATLTALVFAIP 114

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               A++++ + +++ P+LD+MQ++P   +L  +V++F     G V G     IFA+   
Sbjct: 115 LGIWASRNKYVSVLIRPVLDLMQTMPAFVYLIPSVLFFS---IGVVPGMFATLIFAMPPG 171

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  + ++  E  RSF  + WQ    + +P ++P ++  +   +     
Sbjct: 172 -----VRMTELGIKQVDKETVEAGRSFGATDWQIMRGIQLPLAVPTIMAGVNQVIMLALS 226

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             V + M+          G+G  +  A+   D+     A L+++ +    D++
Sbjct: 227 MAVIAGMV-------GADGLGKEVVKALATIDIAKGTEAGLSIVFLAIFLDRV 272



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 11/223 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V    +  +W+        F     L        T+  V +  + A +  IP+GIW 
Sbjct: 60  VVFVLIAWMAKSWRLALGTAITFLVIISLGQWQNAMETLVLVTLATLTALVFAIPLGIWA 119

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
               ++S  I+P   L+   PA V+    V   S   +       +          +   
Sbjct: 120 SRNKYVSVLIRPVLDLMQTMPAFVYLIPSVLFFSIGVVPGMFATLIF----AMPPGVRMT 175

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G      +  E   SF  T W+  R I LP   P  + G       A + ++++ +  
Sbjct: 176 ELGIKQVDKETVEAGRSFGATDWQIMRGIQLPLAVPTIMAGVNQVIMLALSMAVIAGMVG 235

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                    GLG  + ++       +     L +    + L+R
Sbjct: 236 -------ADGLGKEVVKALATIDIAKGTEAGLSIVFLAIFLDR 271


>gi|223042893|ref|ZP_03612941.1| choline transporter [Staphylococcus capitis SK14]
 gi|222443747|gb|EEE49844.1| choline transporter [Staphylococcus capitis SK14]
          Length = 504

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ +       L  K++++  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLLSTIIEHIQISFIALLIATIIAVPLGILLTKTKKISEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + AI A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPIFGIG--------RVPAIIALVVYALLPILRNTYTGIEEVDPSLVEAAKGIGMKPIR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              D   IL   +    +  ++D L+ R M   S K
Sbjct: 173 DRNDSSLILIGAIPAALLAIIFD-LILRYMEKLSYK 207



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+II +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATIIAVPLGILLTKTKKISEIVMNIAAVLQTIPSLALLGLMIPIFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIEEVDPSLVEAAKGIGMKPIRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDSSLILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + +
Sbjct: 196 -LILRYMEKLSYKKI 209


>gi|163850598|ref|YP_001638641.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163662203|gb|ABY29570.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 332

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     +D   +      ++  +    +I + +   +G+ IG+   +     P  + +  
Sbjct: 120 ILEVFLEDWPRLGGSILASLKLLAGGYLIGAGLGFVLGVAIGWSKAVGYWAHPILRFVGP 179

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P+          +     + L+   T + +     +G +     + +VA +  
Sbjct: 180 LPATAWLPMAFFVFP----SSWSASTFLIALATGFPVTVLTWSGVAGVNKSYFDVARTLG 235

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GGA+   +V+E+          +GLG Y+  + 
Sbjct: 236 ASPAFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLG------VKSGLGWYLQWAQ 289

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++  +   +++M      L   L+ 
Sbjct: 290 GWAAYANMYAALIVMALMCSGLITLLFR 317



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +   +    +I     FV       S+ +G    PIL  +  +P   +L
Sbjct: 127 DWPRLGGSILASLKLLAGGYLIGAGLGFVLGVAIGWSKAVGYWAHPILRFVGPLPATAWL 186

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 187 PMAFFVF--------PSSWSASTFLIALATGFPVTVLTWSGVAGVNKSYFDVARTLGASP 238

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 239 AFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLGVKS------GLGWYLQWAQGWA 292

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A++ M  +      LLFR
Sbjct: 293 AYANMYAALIVMALMCSGLITLLFR 317


>gi|167632060|ref|ZP_02390387.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|254743021|ref|ZP_05200706.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Kruger B]
 gi|167532358|gb|EDR94994.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
          Length = 278

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 86/279 (30%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +             M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLIIIPAILMIILLCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N       +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYRAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|186472444|ref|YP_001859786.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184194776|gb|ACC72740.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 292

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 92/247 (37%), Gaps = 10/247 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +    +    +                   +    L Q  + +   +L   ++ +  
Sbjct: 50  IVLIAGWELAARAIDNDLLLPTFGATFAAFVQGIASGELLQKTAASMSVLLRGYLLGVAL 109

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+  +LA  +R    +L  +  +   +P +  L   +++F             + +F +
Sbjct: 110 AFLLTSLAVSTRIGRDLLSMLTAMFNPLPSIALLPLALLWFGLGTG--------SLLFVL 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  +MY     +P  L    R++ L+G      + VP ++P ++  + +  + 
Sbjct: 162 VHAVLWPLALNMYAGFRAVPATLRMAGRNYGLTGLHHVVLILVPAALPSILAGLRVGWAF 221

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F  
Sbjct: 222 AWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFGGLAAVIAIGLLVEHLVFDT 279

Query: 263 MIVWSNK 269
           +   + +
Sbjct: 280 LERMTVR 286



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 84/280 (30%), Gaps = 16/280 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L  +     E  L +         L      +V      +A ++I   +   T+    
Sbjct: 17  RPLEPVGDLAVEAPLPIARRLANQSWLSKTIIAIVLIAGWELAARAIDNDLLLPTFGATF 76

Query: 378 YVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                G            +M  ++   ++   +   +             +     +   
Sbjct: 77  AAFVQGIASGELLQKTAASMSVLLRGYLLGVALAFLLTSLAVSTRIGRDLLSMLTAMFNP 136

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    PL +        +    L  +++    W +  N+ AG  A P   +    ++ 
Sbjct: 137 LPSIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALNMYAGFRAVPATLRMAGRNYG 192

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +TG      I++P   P  + G       AW   I +E+           GLG YI ++ 
Sbjct: 193 LTGLHHVVLILVPAALPSILAGLRVGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNR 250

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +     V  G+  +    L +   ++  L     R   L
Sbjct: 251 NELYTDRVFGGLAAVIAIGLLVEHLVFDTLERMTVRRWGL 290


>gi|260460056|ref|ZP_05808309.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034267|gb|EEW35525.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 255

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 11/215 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
           +   +W     G    I   S G +            +WL    +M+R+ +  +IAS + 
Sbjct: 19  LGLAWWAATGLGWVKPIFLPSPGSVATQIVKLATEGTLWLDLRASMYRISIGFLIASALS 78

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ IG      + I+P    +   P   F PL +               L++  GT 
Sbjct: 79  IPIGVLIGSFRSWEAAIEPLVDFIRYMPVVAFVPLSILWAGTGDTQK----FLIIFIGTF 134

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  +  ++      P DF  +  +  +   +    I++P   P        + G AW   
Sbjct: 135 FQQVLMIMDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLRISLGWAWTWL 194

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++E+ +       T+GLG  I  S        ++
Sbjct: 195 VLAELVA------ATSGLGYRITVSQRYFQTNTII 223



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 93/242 (38%), Gaps = 19/242 (7%)

Query: 23  LAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +A  + +G+      G+          P  +   +       +L      +  R+    +
Sbjct: 13  VAVFVGLGLAWWAATGLGWVKPIFLPSPGSVATQIVKLATEGTLWLDLRASMYRISIGFL 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+   +     L    R     + P++D ++ +P++ F+  ++++       K +     
Sbjct: 73  IASALSIPIGVLIGSFRSWEAAIEPLVDFIRYMPVVAFVPLSILWAGTGDTQKFL----- 127

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               IF    +     +  ++  +P D   + R+  L   +    + VP ++PG+   + 
Sbjct: 128 ---IIFIGTFFQQVLMIMDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLR 184

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+   W ++V +E++          G+G  I ++ +      I+  +L +  +  + DQ
Sbjct: 185 ISLGWAWTWLVLAELVA------ATSGLGYRITVSQRYFQTNTIIGYILLLGVLGLITDQ 238

Query: 258 LL 259
           ++
Sbjct: 239 VM 240


>gi|256826772|ref|YP_003150731.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease
           [Cryptobacterium curtum DSM 15641]
 gi|256582915|gb|ACU94049.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Cryptobacterium curtum DSM 15641]
          Length = 394

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 100/265 (37%), Gaps = 15/265 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG----YIVN 369
           + L       R H  ++      ++ V   + IFW  V   V   +  + I       + 
Sbjct: 119 RILDEERAAARIHAADDARAARRSKLVKCAVIIFWLIVWQLVDTLVDNRLILTGPIRTIQ 178

Query: 370 HFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               Q V    W+ C  +  R+ +  +++  + I + +       + + ++P   LL   
Sbjct: 179 ALGDQAVKPDFWIICGASFGRIALGFLLSFTVGILLALLSYRVKLVRAFVEPIVSLLRTI 238

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F  +++  V    L   ++LS L++      I  N++ G  +      E+A  + +
Sbjct: 239 PVVTFIIMLLIWVGNQALT--IYLSFLIVLP---LIYTNMLTGFESVDAQMLEMARVYRL 293

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + WR + Y+  P   P+  +    + G +W + I++EV +          +G  ++++  
Sbjct: 294 SRWRTFMYVYRPAFMPFLSSSCKISLGMSWKSGIMAEVLATPKPS-----IGKEMSQART 348

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
               P +    +++        +  
Sbjct: 349 YLDTPSLFAWTVVVMILSWLFEKVF 373



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 103/248 (41%), Gaps = 18/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +++V  +++ L+      T P   +  +               +  R+    ++S  
Sbjct: 150 IIFWLIVWQLVDTLVDNRLILTGPIRTIQALGDQAVKPDFWIICGASFGRIALGFLLSFT 209

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A L+ + + +   + PI+ ++++IP++ F+   +++         +G +   I+ 
Sbjct: 210 VGILLALLSYRVKLVRAFVEPIVSLLRTIPVVTFIIMLLIW---------VGNQALTIYL 260

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  +M     ++   + E++R +RLS W+ F Y+  P  MP L  +  +S+ 
Sbjct: 261 SFLIVLPLIYTNMLTGFESVDAQMLEMARVYRLSRWRTFMYVYRPAFMPFLSSSCKISLG 320

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   + +E++       P P IG  ++ A    D      ++     V+ +   L  +
Sbjct: 321 MSWKSGIMAEVLAT-----PKPSIGKEMSQARTYLDTP----SLFAWTVVVMILSWLFEK 371

Query: 262 PMIVWSNK 269
             +   ++
Sbjct: 372 VFMALLDR 379


>gi|255654951|ref|ZP_05400360.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-23m63]
 gi|296449698|ref|ZP_06891468.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296877985|ref|ZP_06902004.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
 gi|296261422|gb|EFH08247.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Clostridium difficile
           NAP08]
 gi|296431053|gb|EFH16881.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
          Length = 515

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 85/216 (39%), Gaps = 15/216 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L    + +   +     +++++I+++       + ++   L  +++  ++++Q++P +
Sbjct: 8   ILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKLVLGFVNLVQAVPSM 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AIF +    +  +  + Y  + +I   + E ++   
Sbjct: 68  ALLGLLVPILGIG--------SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   +
Sbjct: 120 LTRNQTLFKIQFPLALPIIMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGV 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   IL   +    +  L D L  +  +  + K
Sbjct: 173 QTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK 208



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 27  VTSILIAIIVGVPLGIIISRISSLRKLVLGFVNLVQAVPSMALLGLLVPILGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 83  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 143 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 195

Query: 571 RFL 573
              
Sbjct: 196 YLF 198


>gi|190574498|ref|YP_001972343.1| putative ABC transporter transmembrane permease [Stenotrophomonas
           maltophilia K279a]
 gi|190012420|emb|CAQ46048.1| putative transmembrane permease ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
          Length = 258

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+           IT+    +  II + + +  G+W+G     +  + PF +   A P  
Sbjct: 47  TWLSDTSFYQHVYITLTETALGYIIGTGLGVAGGVWLGLSRRSARILDPFIKGFNAIPRV 106

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V  P+ V  +     +       L+ F T     FN + G           A     +  
Sbjct: 107 VLAPIFVLWLGLGLWSKVALAVTLVFFTTF----FNAMQGVREVNPVVLANARILGASRS 162

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              R++  P    + ++   T+ G A   +I+ E          + GLG  IA++    +
Sbjct: 163 DLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG------ASAGLGYLIAQAEGNFN 216

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V  G++I+  FVL ++  L
Sbjct: 217 AVGVFAGIIILAAFVLVIDALL 238



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  IV      L   S  Q+   T        +I              SRR   +L P
Sbjct: 36  PSPTAIVQQAWTWLSDTSFYQHVYITLTETALGYIIGTGLGVAGGVWLGLSRRSARILDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKGFNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFTTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R    S      ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVVLANARILGASRSDLLRHVYFPAAASWILSSLRTSVG---FAVVGA---IIGEYLGAS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  IA A    + + +   ++ +   + + D LL
Sbjct: 202 AGLGYLIAQAEGNFNAVGVFAGIIILAAFVLVIDALL 238


>gi|282900995|ref|ZP_06308928.1| hypothetical protein CRC_02411 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194086|gb|EFA69050.1| hypothetical protein CRC_02411 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 286

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T    +  + +A I  I +GI + + P  +  I P+ Q+  + P     P 
Sbjct: 83  GIIFQHAFVTFQEAISGLALAMIGGISLGIALAYSPSGAKIILPYVQIFNSLPRIALAPF 142

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       L+      LL      + I F    G      +            W+    
Sbjct: 143 FIVWFGIGLLSK----VLLAALAAFFPIFFTTYQGIQTIEPELIAAFQVMGANRWQMLHM 198

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP +  + + G  T+ G A   ++V+E          T GLG  +  +    +  +  
Sbjct: 199 VVLPSVLSWVIAGIRTSLGMALVGALVAEYIG------STHGLGYMLMAAQGNLNVDKSW 252

Query: 557 LGVLIMCCFVLALN 570
             ++++    + L+
Sbjct: 253 AILVVLASISVFLD 266



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 101/270 (37%), Gaps = 24/270 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP----- 62
           P F   +++     L+  +++  +   +     +   P  +     I  ++  L      
Sbjct: 27  PKFTKIQLWSQFIPLVITLVLWQVGTGV-FNTPQLIEPALVGKPSLIIKELWDLLTAGII 85

Query: 63  -QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q+A  T    +S + ++++         A S     +++P + I  S+P +    F +V
Sbjct: 86  FQHAFVTFQEAISGLALAMIGGISLGIALAYSPSGAKIILPYVQIFNSLPRIALAPFFIV 145

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      KV+ A LAA F IF        F+ YQ +  I  +L    +    + WQ   
Sbjct: 146 WFGIGLLSKVLLAALAAFFPIF--------FTTYQGIQTIEPELIAAFQVMGANRWQMLH 197

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P  +  ++  +  S+       + +E I          G+G  +  A    ++   
Sbjct: 198 MVVLPSVLSWVIAGIRTSLGMALVGALVAEYIG------STHGLGYMLMAAQGNLNVDKS 251

Query: 242 LYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
              ++ +  +    D   ++L + ++ W  
Sbjct: 252 WAILVVLASISVFLDWGIRVLEKYILRWQP 281


>gi|329893554|ref|ZP_08269719.1| Urea carboxylase-related ABC transporter, permease protein [gamma
           proteobacterium IMCC3088]
 gi|328923634|gb|EGG30945.1| Urea carboxylase-related ABC transporter, permease protein [gamma
           proteobacterium IMCC3088]
          Length = 270

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +  R++    IA  I +P+G+ +G    +   + P A      PA  F PL++  +   
Sbjct: 78  ASTKRILTSFAIAIAIALPLGLLMGALKVVDRVLSPLAGAFRYLPAPAFIPLLLMWLGTG 137

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L++ G  ++++  +       P  F E A +  +  ++    +I     P
Sbjct: 138 EAQK----IALLVIGVIFFLIIMIADTTRQVPKVFLETAKTLGLPNYKILWSVIFRYSLP 193

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            Y+         +W   +++E+ +       T G+GA +  +       +++ G+L++  
Sbjct: 194 AYIDLFRQMLAVSWTYLVIAEIVA------ATDGIGAMMMRAKRFVHVDDIMAGILVIGI 247

Query: 565 FVLALNRFL 573
             L  +   
Sbjct: 248 LGLLFDALF 256



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 79/193 (40%), Gaps = 14/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T R+L++  I++        L    + +  VL P+    + +P   F+   +++    
Sbjct: 78  ASTKRILTSFAIAIAIALPLGLLMGALKVVDRVLSPLAGAFRYLPAPAFIPLLLMWLGTG 137

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E   I  +    ++ +   +  +   +P+   E +++  L  ++  W +   
Sbjct: 138 --------EAQKIALLVIGVIFFLIIMIADTTRQVPKVFLETAKTLGLPNYKILWSVIFR 189

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +S+P  +      ++  W ++V +E++   D      GIG+ +  A +   +  I+  +L
Sbjct: 190 YSLPAYIDLFRQMLAVSWTYLVIAEIVAATD------GIGAMMMRAKRFVHVDDIMAGIL 243

Query: 247 TMLGVIFLYDQLL 259
            +  +  L+D L 
Sbjct: 244 VIGILGLLFDALF 256


>gi|15800795|ref|NP_286809.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 EDL933]
 gi|15830271|ref|NP_309044.1| alkanesulfonate transporter permease subunit [Escherichia coli
           O157:H7 str. Sakai]
 gi|168762926|ref|ZP_02787933.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|217326045|ref|ZP_03442129.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|12514109|gb|AAG55419.1|AE005283_6 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360476|dbj|BAB34440.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|189366792|gb|EDU85208.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|209774658|gb|ACI85641.1| putative transport system permease protein [Escherichia coli]
 gi|209774660|gb|ACI85642.1| putative transport system permease protein [Escherichia coli]
 gi|209774664|gb|ACI85644.1| putative transport system permease protein [Escherichia coli]
 gi|217322266|gb|EEC30690.1| putative sulfonate ABC transporter, permease protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|326346148|gb|EGD69886.1| Alkanesulfonates transport system permease protein [Escherichia
           coli O157:H7 str. 1044]
          Length = 263

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +           + V +   TL     L Q+ + ++ R L   
Sbjct: 14  PWFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIVF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 17/239 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSI-------GYIVNHFTYQDVLYVIWLGCITMFRVV 391
           RV+          V  +A  + W S        G ++  +T      +     I+ +R +
Sbjct: 11  RVAPWFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRAL 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           ++  I   + + +G+  G        +    Q+L   P     PLV+             
Sbjct: 71  IVFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G  
Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVR 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A G  W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239


>gi|317405996|gb|EFV86274.1| transmembrane permease ABC transporter [Achromobacter xylosoxidans
           C54]
          Length = 264

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   V+   I +I  +  G+W+G  P  S+ + P+ +   + P  +  P+        
Sbjct: 66  VTLTETVLAFFIGTIAGLAFGLWLGLSPRASAILDPYIKAANSMPRVILAPIFGMWFGLG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G         + A        +  R++ LP    
Sbjct: 126 IWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGARQRQLLRHVYLPSATS 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++  
Sbjct: 182 WVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIVVLTA 235

Query: 565 FVLALNRFL 573
           F L L+  +
Sbjct: 236 FALVLDYIV 244



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + A  I  +    +      S R   +L P +    S+P +       ++F
Sbjct: 63  HLWVTLTETVLAFFIGTIAGLAFGLWLGLSPRASAILDPYIKAANSMPRVILAPIFGMWF 122

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   L + +R       Q   ++
Sbjct: 123 GLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLDNARMLGARQRQLLRHV 174

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 175 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGYLILQAEGTFDVNTVFA 228

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 229 GIVVLTAFALVLDYIVGVGEKRLMKWQPK 257


>gi|254974526|ref|ZP_05270998.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-66c26]
 gi|255091914|ref|ZP_05321392.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile CIP
           107932]
 gi|255313649|ref|ZP_05355232.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-76w55]
 gi|255516333|ref|ZP_05384009.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-97b34]
 gi|255649433|ref|ZP_05396335.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-37x79]
          Length = 515

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 84/216 (38%), Gaps = 15/216 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L    + +   +     +++++I+++       + ++   L   ++  ++++Q++P +
Sbjct: 8   ILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSM 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AIF +    +  +  + Y  + +I   + E ++   
Sbjct: 68  ALLGLLVPILGIG--------SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   +
Sbjct: 120 LTRNQTLFKIQFPLALPIIMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGV 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   IL   +    +  L D L  +  +  + K
Sbjct: 173 QTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK 208



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 27  VTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 83  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 143 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 195

Query: 571 RFL 573
              
Sbjct: 196 YLF 198


>gi|297586981|ref|ZP_06945626.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Finegoldia magna ATCC 53516]
 gi|297574962|gb|EFH93681.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Finegoldia magna ATCC 53516]
          Length = 341

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 10/229 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L ++ F  +    + + +      + +    D   +I     ++  +     I +I+ 
Sbjct: 105 FLLTLYDFLTLKTGILTLPYFPWIDKILNSIIADKALLIKSVKSSLKLLFSGYFIGAILG 164

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +  GI  G+   ++  I PF +LL   P   + PLV+        +       ++  G  
Sbjct: 165 LITGILCGYSKKVNYWISPFMKLLGPIPTTTWLPLVMVLA----TSLFYGSVFIIALGVW 220

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  + I G         E A +   TG +    I +P   P    G       A  A 
Sbjct: 221 YAVTISTITGILNVDKSNYEAAKTLGATGNQLITKIAIPSAMPNIFGGLTIGMSSACTAL 280

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +++E+          +GLG YI        +  +   ++I+C   +A+N
Sbjct: 281 LIAEMLG------VESGLGWYITWKKSWAEYASMYGAIIIICLTFIAVN 323



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 88/216 (40%), Gaps = 19/216 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L +    +   + S   I  +   +   L   S+++   + P + ++  IP   +L
Sbjct: 138 DKALLIKSVKSSLKLLFSGYFIGAILGLITGILCGYSKKVNYWISPFMKLLGPIPTTTWL 197

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V   +L+ G        ++F I     + +T S    + N+ +   E +++   +G
Sbjct: 198 PLVMVLATSLFYG--------SVFIIALGVWYAVTISTITGILNVDKSNYEAAKTLGATG 249

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI----ALA 232
            Q    + +P +MP +   + + MS     ++ +EM+ V        G+G YI    + A
Sbjct: 250 NQLITKIAIPSAMPNIFGGLTIGMSSACTALLIAEMLGVES------GLGWYITWKKSWA 303

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
                  AI+   LT + V F+   L+ + ++ W  
Sbjct: 304 EYASMYGAIIIICLTFIAVNFVLS-LIKKRVLKWQE 338


>gi|153954793|ref|YP_001395558.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219855253|ref|YP_002472375.1| hypothetical protein CKR_1910 [Clostridium kluyveri NBRC 12016]
 gi|146347651|gb|EDK34187.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219568977|dbj|BAH06961.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 350

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   ++     +M  +V+  I+ + + +  GI +G+         P  +++   PA  +
Sbjct: 145 EDWSTLLMSTAYSMRLLVIGFIVGTFLGLVTGILMGWYRQWYYWFFPVLKVIGVVPAVAW 204

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+V+       ++     + L++    + + F    G    P  + E A +        
Sbjct: 205 IPVVMIIFPSILVSE----AALIVLCVWFPVAFMASGGIENIPKSYFEAAKTLGADERFL 260

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +PG  P   TG  TA G ++   +VSE+           GLG YI  +    ++ 
Sbjct: 261 IFKIAIPGAMPSIFTGIYTATGLSFTTLVVSEMLG------AKAGLGWYINWAKGWSNYA 314

Query: 554 EVVLGVLIMCCF 565
           +V   ++IM   
Sbjct: 315 KVYAAIVIMAVV 326



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P     I  I  D  +L    + +   ++   ++      V   L    R+      P+L
Sbjct: 134 PGTAQIIQVIVEDWSTLLMSTAYSMRLLVIGFIVGTFLGLVTGILMGWYRQWYYWFFPVL 193

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++  +P + ++   ++ F            ++    I     + + F     + NIP+ 
Sbjct: 194 KVIGVVPAVAWIPVVMIIF--------PSILVSEAALIVLCVWFPVAFMASGGIENIPKS 245

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             E +++         + + +P +MP +   +  +    +  +V SEM+          G
Sbjct: 246 YFEAAKTLGADERFLIFKIAIPGAMPSIFTGIYTATGLSFTTLVVSEMLGAKA------G 299

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G YI  A    +   +  A++ M  V  +   ++F+
Sbjct: 300 LGWYINWAKGWSNYAKVYAAIVIMAVVFSIVLAIIFK 336


>gi|171320773|ref|ZP_02909781.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171093965|gb|EDT39078.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 295

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 97/244 (39%), Gaps = 12/244 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
              ++A VL+     +      +  VP     +      +    L      +   +L   
Sbjct: 47  RRGVIALVLIAAWEIVARIVANDLLVPTVGATLAAFVQGIASGELLVKTGISMSVLLRGY 106

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + ++F FV  +LA  +R    VL  +  +   +P +  L   +++F             
Sbjct: 107 ALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWFGLGTG-------- 158

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +F +  + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P ++  +
Sbjct: 159 SLLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPSILSGL 218

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +  +  W  ++A+E++          G+G YI     E     +   +  ++ +  L +
Sbjct: 219 RVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVE 276

Query: 257 QLLF 260
            L+F
Sbjct: 277 HLVF 280



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 9/277 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
             +                      + +R  ++ +L   W  V   VA  +   ++G  +
Sbjct: 20  RTLDTPPDAERAAPAPLVRRIAGASAFRRGVIALVLIAAWEIVARIVANDLLVPTVGATL 79

Query: 369 NHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
             F        ++    I+M  ++    +  +    +             +     +   
Sbjct: 80  AAFVQGIASGELLVKTGISMSVLLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNP 139

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    P+ +        +    L  +++    W +  ++  G +  P   K    ++ 
Sbjct: 140 LPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYG 195

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++ 
Sbjct: 196 LTGARQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNR 253

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +     V  G+  +    L +   ++  L     R 
Sbjct: 254 NELYTDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 290


>gi|266624053|ref|ZP_06116988.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288864120|gb|EFC96418.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 242

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 83/227 (36%), Gaps = 10/227 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  +    A  +       ++   T      +      ++FRV+   ++     IP+  
Sbjct: 23  VWQMISVSEAGAVFASPKKTLMAFITMAQSGAIWVHIGYSLFRVITGFLLGLAAAIPIAF 82

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+   +   ++P  Q +   P   + PLV+  +            +++   T   ++ 
Sbjct: 83  LMGWYKTVQYLLEPVVQFIRTIPPIAYIPLVIVALGV----DESSKIMVIFIATFLVMVI 138

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +  G     +   + A          + ++++P  FP+ +T             I SE+
Sbjct: 139 TIYQGVKNVDSTLVKAARVLGANDRDIFFHVVVPASFPFVLTAIRLGLSAGLTTLIASEL 198

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    + GLG  I E++       V++G++++    LALN+ +
Sbjct: 199 ------TGASKGLGTMIQEASMYFRMDVVIMGIMVIGIIGLALNKIV 239



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 100/243 (41%), Gaps = 16/243 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++  ++ VL + +  ++           P+  +          ++  +   +  R+++  
Sbjct: 11  VWSWISLVLCLAVWQMISVSEAGAVFASPKKTLMAFITMAQSGAIWVHIGYSLFRVITGF 70

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++ L      A L    + +  +L P++  +++IP + ++   +V             E 
Sbjct: 71  LLGLAAAIPIAFLMGWYKTVQYLLEPVVQFIRTIPPIAYIPLVIVALGVD--------ES 122

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  IF +    M  ++YQ + N+   L + +R    +    F+++ VP S P ++  +
Sbjct: 123 SKIMVIFIATFLVMVITIYQGVKNVDSTLVKAARVLGANDRDIFFHVVVPASFPFVLTAI 182

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +S G   ++ASE+           G+G+ I  A     +  ++  ++ +  +    +
Sbjct: 183 RLGLSAGLTTLIASEL------TGASKGLGTMIQEASMYFRMDVVIMGIMVIGIIGLALN 236

Query: 257 QLL 259
           +++
Sbjct: 237 KIV 239


>gi|254560219|ref|YP_003067314.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254267497|emb|CAX23338.1| ABC transporter, permease [Methylobacterium extorquens DM4]
          Length = 332

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     +D   +      ++  +    +I + +   +G+ IG+   +     P  + +  
Sbjct: 120 ILEVFLEDWPRLGGSILASLKLLAGGYLIGAGLGFGLGVAIGWSKAVGYWAHPILRFVGP 179

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P+          +     + L+   T + +     +G +     + +VA +  
Sbjct: 180 LPATAWLPMAFFVFP----SSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLG 235

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GGA+   +V+E+          +GLG Y+  + 
Sbjct: 236 ASPAFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLG------VKSGLGWYLQWAQ 289

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++  +   +++M      L   L+ 
Sbjct: 290 GWAAYANMYAALIVMALMCSGLITLLFR 317



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +   +    +I     F        S+ +G    PIL  +  +P   +L
Sbjct: 127 DWPRLGGSILASLKLLAGGYLIGAGLGFGLGVAIGWSKAVGYWAHPILRFVGPLPATAWL 186

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 187 PMAFFVF--------PSSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLGASP 238

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 239 AFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLGVKS------GLGWYLQWAQGWA 292

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A++ M  +      LLFR
Sbjct: 293 AYANMYAALIVMALMCSGLITLLFR 317


>gi|170693280|ref|ZP_02884440.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141810|gb|EDT09978.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 263

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 21/268 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI----TLDVHSLPQYAS 66
            +R++  + +     ++V+ ++   L        P  +     I          L + + 
Sbjct: 3   FTRKVLSSQWVRPLLLIVVIVLAWDLVIRIFKIPPYLVPTPEAILHQIAAQWSMLLEESL 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L    +S+L     A L A S  +   L P++   QSIP +      VV+F   
Sbjct: 63  PTLYATLGGFALSVLIGVPIAMLVAASPLIESYLYPLVVFSQSIPKVAIAPLFVVWFGFG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              +        I   F    + +  S      ++ +DL ++++S   S  + F+ + +P
Sbjct: 123 LFPR--------ILVAFLLGFFPVVVSTVMGFKSVEKDLTDLAKSMGSSPVKTFFKISLP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +  +M +S++      V  E +          G+G  +  A    D   I  A++
Sbjct: 175 HALPSIFASMKVSITLAVVGAVVGEFVGANS------GLGFVLQRANGNFDQPLIFSALV 228

Query: 247 TMLGVIFLY---DQLLFRPMIVWSNKFR 271
            +  +  L      +L R  I W    R
Sbjct: 229 VLSVIGALLFVAIDMLERIAIPWHASHR 256



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 75/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  V+    I          + H        ++     T++  +    ++ +I +
Sbjct: 21  VIVLAWDLVIRIFKIPPYLVPTPEAILHQIAAQWSMLLEESLPTLYATLGGFALSVLIGV 80

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+ + +   P I S + P      + P     PL V    +          L+      +
Sbjct: 81  PIAMLVAASPLIESYLYPLVVFSQSIPKVAIAPLFVVWFGFG----LFPRILVAFLLGFF 136

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++ + + G  +   D  ++A S   +  + +  I LP   P        +   A   ++
Sbjct: 137 PVVVSTVMGFKSVEKDLTDLAKSMGSSPVKTFFKISLPHALPSIFASMKVSITLAVVGAV 196

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           V E           +GLG  +  +      P +   ++++      L
Sbjct: 197 VGEFVG------ANSGLGFVLQRANGNFDQPLIFSALVVLSVIGALL 237


>gi|153931313|ref|YP_001383976.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A str. ATCC 19397]
 gi|153935827|ref|YP_001387520.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A str. Hall]
 gi|152927357|gb|ABS32857.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A str. ATCC 19397]
 gi|152931741|gb|ABS37240.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A str. Hall]
          Length = 527

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A++I+++       +  K++++  +++   ++ Q+IP L  L F +           
Sbjct: 26  TLIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 81  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    +   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGVRIA------SVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 191 ALIIDWITGR 200



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+GI I     I++ +  FA L  A P+      ++  +       + 
Sbjct: 27  LIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----SA 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFVGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALIID 195


>gi|149204707|ref|ZP_01881671.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius sp. TM1035]
 gi|149141816|gb|EDM29868.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Roseovarius sp. TM1035]
          Length = 494

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + + +T   + +A ++ ++         A+S+    +  PILD MQ++P   +L   + 
Sbjct: 304 WELSMQTVALLGAASILCIVIGIPLGIWFARSKTAFAIAQPILDFMQTMPAFVYLIPVIA 363

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F    P          I A     +  +       L  +  D++E +R++  + WQ   
Sbjct: 364 FFGTGKPPG--------IIATLIFGMPPVIRLTTLGLTGVAEDVKEAARAYGATEWQVLR 415

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   ++  +  ++      VV + +I          G+GS +  +++       
Sbjct: 416 GVELPLAKASILAGINQTILMCLSMVVIASLI-------GAQGLGSVVLTSLQYAAKGQG 468

Query: 242 LYAMLTMLGVIFLYDQLL 259
           L A L +L    + D+++
Sbjct: 469 LLAGLAILLCAMVIDRIV 486



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 92/236 (38%), Gaps = 16/236 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L    + V+  V   +AWQ  G  +  FT   + Y+ + G       T+  +    I+ 
Sbjct: 262 VLVGTPWPVIMLVICTLAWQLAGPRIAVFTAAALAYLAFYGFWELSMQTVALLGAASILC 321

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IP+GIW        +  QP    +   PA V+    +  ++++       +   +I
Sbjct: 322 IVIGIPLGIWFARSKTAFAIAQPILDFMQTMPAFVYL---IPVIAFFGTGKPPGIIATLI 378

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           FG    ++     G +    D KE A ++  T W+  R + LP      + G        
Sbjct: 379 FG-MPPVIRLTTLGLTGVAEDVKEAARAYGATEWQVLRGVELPLAKASILAGINQTILMC 437

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +  +++ +           GLG+ +  S +  +  + +L  L +    + ++R +
Sbjct: 438 LSMVVIASLIG-------AQGLGSVVLTSLQYAAKGQGLLAGLAILLCAMVIDRIV 486


>gi|302549308|ref|ZP_07301650.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302466926|gb|EFL30019.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 293

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 83/276 (30%), Gaps = 13/276 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P +   +   R                 S   V  +L  F       +   +    +  +
Sbjct: 20  PPAATTRVTLRGTAKSGRRLTLPRSVRRSAGPVGLVLLWFLTSATGVLPESVLASPVDVV 79

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +      +  R  V  +I + + + + +  G        I     +  A
Sbjct: 80  NQALELTRNGELPSAIAASGRRAAVGFLIGASVALSLSLLAGLFRLGEDVIDSSMGMFRA 139

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL +                L+  G  + + FN+  G  +  +   E A    
Sbjct: 140 IPWVGLIPLFIVWFGIEETPK----IALVALGVTYPLYFNIYGGIRSTDSQLVEAARMMG 195

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +      RY+ILP   P  + G   A   AW A + +E  +         GLG  ++ + 
Sbjct: 196 LGRLGLIRYVILPSALPGALVGLRYALSTAWLALVFAEQVN------ADAGLGYLMSNAQ 249

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +      +VL +++     LA +   R L   L  +
Sbjct: 250 QYFRTDVIVLCLVVYALLGLACDFAVRILSRRLLTW 285



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 17/235 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V+          LP   + +  R     +I        + LA   R    V+ 
Sbjct: 72  LASPVDVVNQALELTRNGELPSAIAASGRRAAVGFLIGASVALSLSLLAGLFRLGEDVID 131

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + + ++IP +G +   +V+F      K        I  +     + + F++Y  + + 
Sbjct: 132 SSMGMFRAIPWVGLIPLFIVWFGIEETPK--------IALVALGVTYPLYFNIYGGIRST 183

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E +R   L       Y+ +P ++PG +  +  ++S  W  +V +E +        
Sbjct: 184 DSQLVEAARMMGLGRLGLIRYVILPSALPGALVGLRYALSTAWLALVFAEQV------NA 237

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
             G+G  ++ A +      I+  ++    +    D   ++L R ++ W   F  E
Sbjct: 238 DAGLGYLMSNAQQYFRTDVIVLCLVVYALLGLACDFAVRILSRRLLTWRANFEGE 292


>gi|221065443|ref|ZP_03541548.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220710466|gb|EED65834.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 293

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV V   +A +I +P+GI +G          P  +     P   + PL++      
Sbjct: 101 ASLLRVTVAFWLAFMIAVPLGIAMGMSRIARGVFDPPIEFYRPLPPLAYLPLIIIWFGI- 159

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    LL+       +     +G  +   +    A S   + ++  R++ILP   P
Sbjct: 160 ---DETPKILLIFLSCFAPLALAARSGMRSAAQEQINAAYSMGASYFQVIRHVILPAALP 216

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A G  W   + +E+ +         GLG  +  ++       V++G++++  
Sbjct: 217 DILVGMRIAIGFGWTTLVAAEMVA------ANVGLGQMVLNASNFLRTDIVIMGIIVIGM 270

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
                + F+      +  + L
Sbjct: 271 IAYVFDLFM-----RWVEKRL 286



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 85/218 (38%), Gaps = 29/218 (13%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFV------YATLAAKSRRLGMVLVPILDIMQSIPILG 114
           L Q+ S + LR+  A      F                SR    V  P ++  + +P L 
Sbjct: 95  LWQHFSASLLRVTVA------FWLAFMIAVPLGIAMGMSRIARGVFDPPIEFYRPLPPLA 148

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           +L   +++F      K        I  IF S    +  +    + +  ++    + S   
Sbjct: 149 YLPLIIIWFGIDETPK--------ILLIFLSCFAPLALAARSGMRSAAQEQINAAYSMGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +Q   ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A  
Sbjct: 201 SYFQVIRHVILPAALPDILVGMRIAIGFGWTTLVAAEMVAANV------GLGQMVLNASN 254

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
                 ++  ++ +  + +++D     + + ++ W  +
Sbjct: 255 FLRTDIVIMGIIVIGMIAYVFDLFMRWVEKRLVPWKGR 292


>gi|320159783|ref|YP_004173007.1| ABC transporter permease protein [Anaerolinea thermophila UNI-1]
 gi|319993636|dbj|BAJ62407.1| ABC transporter permease protein [Anaerolinea thermophila UNI-1]
          Length = 246

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 14/210 (6%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ +  +V      D+         +++RVV   +++ ++  P G+ +G    ++    P
Sbjct: 33  WRVLRALVQETLSGDLPKHF---LASLWRVVASTLLSILLAAPAGLVLGQSRRLNRLFTP 89

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              LL   P  VF P+++       L+      L++     + IL  V   A+A   +  
Sbjct: 90  MIYLLYPIPKVVFVPVLLLFFGIGDLSK----ILVIFLILFFQILVLVRDQAAALRPELI 145

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
               S        +R++ LP   P  +T    + G A     V+E+ +         GLG
Sbjct: 146 LSVRSLGAGRRALFRFVYLPASLPGILTALRQSIGTAVAVLYVAELFA------TRVGLG 199

Query: 541 AYIA-ESTEKGSFPEVVLGVLIMCCFVLAL 569
            YI  + +   ++P +  G+L M    L L
Sbjct: 200 YYIYFQGSTLLNYPAMYAGILAMSFLGLGL 229



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 90/229 (39%), Gaps = 18/229 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  ++  +        LP++   +  R++++ ++S+L       +  +SRRL  +  P++
Sbjct: 32  PWRVLRALVQETLSGDLPKHFLASLWRVVASTLLSILLAAPAGLVLGQSRRLNRLFTPMI 91

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++  IP + F+   +++F           +L+ I  IF    + +   +      +  +
Sbjct: 92  YLLYPIPKVVFVPVLLLFFGIG--------DLSKILVIFLILFFQILVLVRDQAAALRPE 143

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L    RS        F ++ +P S+PG++  +  S+      +  +E+           G
Sbjct: 144 LILSVRSLGAGRRALFRFVYLPASLPGILTALRQSIGTAVAVLYVAELFA------TRVG 197

Query: 225 IGSYIA-LAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           +G YI        +  A+   +L M  +      L   L R +  W  +
Sbjct: 198 LGYYIYFQGSTLLNYPAMYAGILAMSFLGLGLYFLVDGLERRLCRWQIR 246


>gi|94269123|ref|ZP_01291376.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
 gi|93451338|gb|EAT02210.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
          Length = 277

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79
            L A  + +  + ++       +    I  I+ + L +   L    + T   +L++ + +
Sbjct: 45  GLQAIPVWLLFLILVGLCWWRVSWRFAIFAILALGLIMGMDLWTETTNTLSLVLASALAA 104

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         ++S  +  ++ P+LD+MQ++P   +L    ++F     G V GA    +
Sbjct: 105 LIIGLPVGVAMSRSDTVEAIIRPLLDLMQTMPPFVYLIPAAIFFGL---GTVPGAIATVV 161

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F      +  +       +  + R+  E   +F  +  Q    + +P ++P ++  +  +
Sbjct: 162 F-----CMPPVVRLTNLGIRQVNREQIEAGLAFGCNRRQLLTKIQLPLALPSIMAGVNQT 216

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G+ +   I+  D+       L ++ +  L D++
Sbjct: 217 IMLALSMVVIASMIGAG-------GLGNTVLTGIQRLDVGLGFEGGLGVVILAILLDRI 268



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + + +  +V      ++W+   + +        + +      T+  V+   + A II +P
Sbjct: 51  VWLLFLILVGLCWWRVSWRFAIFAILALGLIMGMDLWTETTNTLSLVLASALAALIIGLP 110

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+ +     + + I+P   L+   P  V+            +   +   +         
Sbjct: 111 VGVAMSRSDTVEAIIRPLLDLMQTMPPFVYLIPAAIFFGLGTVPGAIATVVF----CMPP 166

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G      +  E   +F     +    I LP   P  + G       A +  ++
Sbjct: 167 VVRLTNLGIRQVNREQIEAGLAFGCNRRQLLTKIQLPLALPSIMAGVNQTIMLALSMVVI 226

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +    ++        G L +    + L+R 
Sbjct: 227 ASMIGAG-------GLGNTVLTGIQRLDVGLGFEGGLGVVILAILLDRI 268


>gi|150015503|ref|YP_001307757.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149901968|gb|ABR32801.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 253

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLA 426
           +  F       +     I++ R+ +  I+A+++ +P G  +G + P ++S   P     +
Sbjct: 40  LRMFKMALSGELFIHIAISIERMAIGFILATVVAVPAGFILGGWVPKLASFFNPLFTNFS 99

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   PL +             +  +++    W +LF  +AG +     F + A S 
Sbjct: 100 QVNPFTLIPLFIILFGIGEAGKVSIIFWVIL----WPMLFTTMAGINQIDPIFIKGARSM 155

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             TG + +  +ILPG      TG  TA    +   I +E+           G+G  ++ S
Sbjct: 156 GATGIQIFFNVILPGSISRIFTGIKTALTVGFTMLIGTEMVG------SEAGIGWIVSNS 209

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            +    P++ +G+L +      ++  
Sbjct: 210 QKNYDVPKLYVGILTIAIVGALISVL 235



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 88/243 (36%), Gaps = 16/243 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76
           NI  +  F L+  +         +       V +    + +   L  + + +  RM    
Sbjct: 7   NIIVVAIFFLIWELAARTGILDTQFIPAFSTVALRMFKMALSGELFIHIAISIERMAIGF 66

Query: 77  VISLLFTFVYA-TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +++ +        L     +L     P+      +     +   ++ F     GKV    
Sbjct: 67  ILATVVAVPAGFILGGWVPKLASFFNPLFTNFSQVNPFTLIPLFIILFGIGEAGKVS--- 123

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
                 IF   +W M F+    +  I     + +RS   +G Q F+ + +P S+  +   
Sbjct: 124 -----IIFWVILWPMLFTTMAGINQIDPIFIKGARSMGATGIQIFFNVILPGSISRIFTG 178

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  +++ G+  ++ +EM+          GIG  ++ + K  D+  +   +LT+  V  L 
Sbjct: 179 IKTALTVGFTMLIGTEMVG------SEAGIGWIVSNSQKNYDVPKLYVGILTIAIVGALI 232

Query: 256 DQL 258
             L
Sbjct: 233 SVL 235


>gi|116671628|ref|YP_832561.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611737|gb|ABK04461.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 280

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM    + ++IA    + +G  IG    +        + L   P+    PL V       
Sbjct: 83  TMKAWFLGLLIAVAAAVLLGFIIGSSNFLRKATNSTVEFLRPIPSVALIPLAVLLFGV-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+++ + W +L  V+ G +         A ++ +      RY++ P   PY
Sbjct: 141 --KIESSLLLIVYASFWQVLIQVLYGVADVDMVANNTAKTYGLGRMARIRYVVFPTALPY 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   A   +I +E+       + + GLG  IA +   G+   +   VL     
Sbjct: 199 LMTGVRLAGAVALVLAITAELV------IGSPGLGREIALAQSGGAISGMYALVLATGLI 252

Query: 566 VLALNRFL 573
            + +N  +
Sbjct: 253 GVLINILM 260



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 96/260 (36%), Gaps = 18/260 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            +  +L F+    +I  L    +    P  +++  +     + +       T       +
Sbjct: 32  GVAGILGFLGTWELIPRLGIIDERYLPPASEVIAALVADFGLTAFWVAVGETMKAWFLGL 91

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I++    +   +   S  L       ++ ++ IP +  +   V+ F       ++    
Sbjct: 92  LIAVAAAVLLGFIIGSSNFLRKATNSTVEFLRPIPSVALIPLAVLLFGVKIESSLL---- 147

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
                I  +  W +   +   + ++       ++++ L    +  Y+  P ++P L+  +
Sbjct: 148 ----LIVYASFWQVLIQVLYGVADVDMVANNTAKTYGLGRMARIRYVVFPTALPYLMTGV 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTMLGVIF 253
            ++ +      + +E++      I  PG+G  IALA     +    A++ A   +  +I 
Sbjct: 204 RLAGAVALVLAITAELV------IGSPGLGREIALAQSGGAISGMYALVLATGLIGVLIN 257

Query: 254 LYDQLLFRPMIVWSNKFRLE 273
           +  + + +  + W +  R E
Sbjct: 258 ILMRFIEKKTLAWHSSVRSE 277


>gi|148379598|ref|YP_001254139.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A str. ATCC 3502]
 gi|148289082|emb|CAL83172.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum A str. ATCC 3502]
          Length = 528

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A++I+++       +  K++++  +++   ++ Q+IP L  L F +           
Sbjct: 27  TLIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----- 81

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 82  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 138

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    +   G+G  +   I+  D   IL+  +    +
Sbjct: 139 IMAGVRIA------SVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 191

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 192 ALIIDWITGR 201



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+GI I     I++ +  FA L  A P+      ++  +       + 
Sbjct: 28  LIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----SA 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 84  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGV 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 144 RIASVTAVGLMTIAAFVGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALIID 196


>gi|116492046|ref|YP_803781.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Pediococcus pentosaceus ATCC
           25745]
 gi|116102196|gb|ABJ67339.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Pediococcus pentosaceus ATCC
           25745]
          Length = 509

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q   +     + +++I++L     A  A   R++  +L+ +  ++Q+IP       
Sbjct: 13  GELGQALLQHIGISVLSLLIAILIAMPLAIWATHHRKVAELLLQVTGVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  S Y  +  I   LEE + +F +   Q
Sbjct: 67  --LALLGLLIPLVGIGSVPAVIALVIYALLPIFQSTYVGITEIDPSLEEAADAFGMRRSQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P +MP ++  +   +         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFRVELPTAMPVIISGIRTGLVLIIGTATLAALIGAG-------GLGNFILLGINRNDP 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             IL   ++   +  +   L+
Sbjct: 178 QLILVGAISSALLAIILSALI 198



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++IA +I +P+ IW      ++  +     +L   P+     L++  V    +   +
Sbjct: 27  VLSLLIAILIAMPLAIWATHHRKVAELLLQVTGVLQTIPSLALLGLLIPLVGIGSVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  +   G +      +E A +F +   +    + LP   P  ++G 
Sbjct: 87  ALVIYALL----PIFQSTYVGITEIDPSLEEAADAFGMRRSQKLFRVELPTAMPVIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T        + ++ +   G       GLG +I     +     +++G +      + L+
Sbjct: 143 RTGLVLIIGTATLAALIGAG-------GLGNFILLGINRNDPQLILVGAISSALLAIILS 195

Query: 571 RFL 573
             +
Sbjct: 196 ALI 198


>gi|255100013|ref|ZP_05328990.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-63q42]
 gi|255305900|ref|ZP_05350072.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile ATCC
           43255]
          Length = 515

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 84/216 (38%), Gaps = 15/216 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L    + +   +     +++++I+++       + ++   L   ++  ++++Q++P +
Sbjct: 8   ILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSM 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AIF +    +  +  + Y  + +I   + E ++   
Sbjct: 68  ALLGLLVPILGIG--------SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   +
Sbjct: 120 LTRNQTLFKIQFPLALPIIMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGV 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   IL   +    +  L D L  +  +  + K
Sbjct: 173 QTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK 208



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 27  VTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 83  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 143 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 195

Query: 571 RFL 573
              
Sbjct: 196 YLF 198


>gi|187734914|ref|YP_001877026.1| binding-protein-dependent transporters inner membrane component
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187424966|gb|ACD04245.1| binding-protein-dependent transport systems inner membrane
           component [Akkermansia muciniphila ATCC BAA-835]
          Length = 263

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 90/262 (34%), Gaps = 13/262 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---- 384
            N          S +  IF       ++    W+   +      ++ +      G     
Sbjct: 3   RNKWSKWGAHACSLVFFIFVVWAWQYLSDLRVWKPYLFPSPLEVWEYLRSSFQDGSLEEA 62

Query: 385 --ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             ITM R+V+   I  +  IP+G+       I + +   +    A P+  + PL      
Sbjct: 63  SWITMKRLVLGYGIGLVTGIPLGMLCSRFQLIQNTLGLVSLGFQALPSVCWVPLATLWFG 122

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                    +  ++I GT W ++     G    P  +   A +          ++ LP  
Sbjct: 123 ----QTEGAMLFVVIMGTLWSVILATANGMRNVPPIYARAARTMGAGPIYCLIHVTLPAS 178

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ V+G       AW + + +E+       L   GLG  +    E  +  +VV  + ++
Sbjct: 179 APFVVSGMKQGWAFAWRSLMAAEIFV---PILTGFGLGQLLHFGRELNAMNQVVGIMFVI 235

Query: 563 CCFVLALNRFLWHPLYLYGTRC 584
               L  ++ L+ PL  +  R 
Sbjct: 236 VVIGLLSDKILFSPLERFLHRR 257



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 94/227 (41%), Gaps = 11/227 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P ++ + +  +    SL + +  T  R++    I L+       L ++ + +   L  
Sbjct: 41  PSPLEVWEYLRSSFQDGSLEEASWITMKRLVLGYGIGLVTGIPLGMLCSRFQLIQNTLGL 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +    Q++P + ++    ++F           E A +F +    +W++  +    + N+P
Sbjct: 101 VSLGFQALPSVCWVPLATLWFGQ--------TEGAMLFVVIMGTLWSVILATANGMRNVP 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                 +R+          ++ +P S P +V  M    +  W  ++A+E+ V    ++  
Sbjct: 153 PIYARAARTMGAGPIYCLIHVTLPASAPFVVSGMKQGWAFAWRSLMAAEIFV---PILTG 209

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  +    +   +  ++  M  ++ +  L D++LF P+  + ++
Sbjct: 210 FGLGQLLHFGRELNAMNQVVGIMFVIVVIGLLSDKILFSPLERFLHR 256


>gi|224475863|ref|YP_002633469.1| putative glycine betaine ABC transporter substrate-binding protein
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420470|emb|CAL27284.1| putative substrate binding component of ABC-type glycine betaine
           transporter [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 504

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 26/221 (11%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++     L             A++I+ L          K++ +   ++ I  ++Q+IP L
Sbjct: 8   LSTRKGELLSTLLEHIQISFIALLIACLIGVPLGIFLTKTKYISEFVINIAAVLQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F            L AI A+    +  +  + Y  +  +   L E ++   
Sbjct: 68  ALLGLMIPIFGIG--------TLPAIIALVVYALLPILRNTYTGIKEVDPSLVEAAKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----Y 228
           +   ++   + +P +MP ++  +  +M           ++++G   +    IG+      
Sbjct: 120 MKPGRRLTKVELPIAMPIIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDL 167

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           I L I   +   IL   +    +  ++D L  R +   S K
Sbjct: 168 ILLGIDRNNSSLILLGAIPAAILAIVFD-LALRYIQKLSYK 207



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA +I +P+GI++    +IS  +   A +L   P+     L++       L   +
Sbjct: 27  FIALLIACLIGVPLGIFLTKTKYISEFVINIAAVLQTIPSLALLGLMIPIFGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLVEAAKGIGMKPGRRLTKVELPIAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNSSLILLGAIPAAILAIVFD 195


>gi|229494699|ref|ZP_04388457.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rhodococcus erythropolis SK121]
 gi|229318366|gb|EEN84229.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rhodococcus erythropolis SK121]
          Length = 285

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 97/270 (35%), Gaps = 25/270 (9%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--------TVPRDIVDIVPITLDVH 59
           P +   R  P    +    LV  ++         T          P  +           
Sbjct: 23  PRYRRNRSRPKWVSIPLRFLVPALLVAGWWIGSATGLIREEILAGPPAVWTAFAELYQSG 82

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   +  R    + + ++   V   L+  S     ++   + I +++P L  +   
Sbjct: 83  QLVDFGLASLQRAALGVSVGVIVGLVLGVLSGLSSLGEELIDSTMQINRAVPFLALVPLF 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           E   +  I  + V  M    Y  +  + R + E ++ F L+GW+ 
Sbjct: 143 IAWFGID--------ETFKVVLIAVATVAPMYAYTYLGVRGVDRKMVEAAQGFGLTGWRL 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +   +P ++PG++  + + +S     ++A+E +          GIG  + LA +     
Sbjct: 195 VFGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTD 248

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            ++  ++    +  ++D   +L+ R  + W
Sbjct: 249 YMVLCIVMYAALGLIFDAIVRLIERYSMPW 278



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 20/274 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-T 372
            +L           P+           + ++  +W     G+           +   F  
Sbjct: 18  PQLETPRYRRNRSRPKWVSIPLRFLVPALLVAGWWIGSATGLIREEILAGPPAVWTAFAE 77

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++  G  ++ R  + + +  I+ + +G+  G        I    Q+  A P   
Sbjct: 78  LYQSGQLVDFGLASLQRAALGVSVGVIVGLVLGVLSGLSSLGEELIDSTMQINRAVPFLA 137

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL ++           +  +L+   T   +      G         E A  F +TGWR
Sbjct: 138 LVPLFIAWFGI----DETFKVVLIAVATVAPMYAYTYLGVRGVDRKMVEAAQGFGLTGWR 193

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
                ILP   P  + G       +    I +E            G+G  +  + E    
Sbjct: 194 LVFGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRT 247

Query: 553 PEVVLGVLIMCCFVLALNRFL---------WHPL 577
             +VL +++     L  +  +         W  L
Sbjct: 248 DYMVLCIVMYAALGLIFDAIVRLIERYSMPWRRL 281


>gi|207723297|ref|YP_002253696.1| aliphatic sulfonates transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|206588495|emb|CAQ35458.1| aliphatic sulfonates transmembrane protein [Ralstonia solanacearum
           MolK2]
          Length = 266

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 17/263 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR+ P +  L   V             +    P D+            L ++ + +T R
Sbjct: 15  GRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAIELARSGELWRHVAVSTWR 74

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    I          L    R    +L   L ++++IP+L  +   +++F        
Sbjct: 75  ALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGID----- 129

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F +     + +  + Y  + ++   L E++RS+ LS  Q +  + +P ++P 
Sbjct: 130 ---ESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVSLPGALPQ 186

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  S+   W  ++ +E +          GIG     A +      +L  +L    +
Sbjct: 187 ILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVVLLGILLYALL 240

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             L D L   L R  + W   ++
Sbjct: 241 GKLADLLSRALERFWLRWHPGYQ 263



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 73/228 (32%), Gaps = 17/228 (7%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITM 387
            + +R+   L      V    +    W S   +                  +     ++ 
Sbjct: 13  AAGRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAIELARSGELWRHVAVST 72

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +R ++   I   + + +G+  G      + +    Q++   P     PLV+         
Sbjct: 73  WRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGI---- 128

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L+  G  + I  N   G  +      E+A S+ ++  + +R + LPG  P  +
Sbjct: 129 DESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYREVSLPGALPQIL 188

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 189 VGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 230


>gi|172065522|ref|YP_001816234.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171997764|gb|ACB68681.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 295

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 93/238 (39%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +    +I  ++            +      +    L      +   +L    + ++F
Sbjct: 53  LVLIAAWEVIARIVANDLLVPTVGATLAAFVQGIASGELLVKTGISMSVLLRGYALGVVF 112

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            FV  +LA  +R    VL  +  +   +P +  L   +++F             + +F +
Sbjct: 113 AFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWFGLGTG--------SLLFVL 164

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P ++  + +  + 
Sbjct: 165 VHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPSILSGLRVGWAF 224

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 225 AWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 280



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 16/290 (5%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
              PL     +  RTL             L      +     F   +V   A  +  + +
Sbjct: 7   ALPPLPPVRAEYVRTLDTPPDAERAAPAPLVRRIAGASAFRRFVVALVLIAAWEVIARIV 66

Query: 365 GYIVNHFTYQDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
              +   T    L     G           I+M  ++    +  +    +          
Sbjct: 67  ANDLLVPTVGATLAAFVQGIASGELLVKTGISMSVLLRGYALGVVFAFVLTSLAVSTRIG 126

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              +     +    P+    P+ +        +    L  +++    W +  ++  G + 
Sbjct: 127 RDVLTMLTAMFNPLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSMYTGFAG 182

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P   K    ++ +TG R    I++P   P  ++G       AW   I +E+        
Sbjct: 183 VPATLKMAGRNYGLTGARQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SA 240

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
              GLG YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 241 GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 290


>gi|116074546|ref|ZP_01471807.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. RS9916]
 gi|116067768|gb|EAU73521.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. RS9916]
          Length = 297

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   ++++ +++L        LAA+      +  P+LD+MQ++P   +L   
Sbjct: 91  QLWDPMLDTLALVVASAIVALAIGLPLGVLAARQPLAWKLTRPLLDLMQTMPAFVYLIPA 150

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + AI A     +  +       +  +P DL E  RSF  S  Q 
Sbjct: 151 VMLFSTG--------AVPAIIATVVFSMPPVVRLTVLGIQQVPSDLIEAGRSFGCSERQL 202

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + +  P ++P ++  +  ++      VV + MI  G            +   I++ ++ 
Sbjct: 203 LFKVQWPNALPTVMTGVNQTIMLSLSMVVIASMIGGGGLGDV-------VLRGIQQLNIG 255

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ++ +  + D+L
Sbjct: 256 LGFEGGLAVVILAVILDRL 274



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           V+ +      T+  VV   I+A  I +P+G+    +P      +P   L+   PA V+  
Sbjct: 89  VMQLWDPMLDTLALVVASAIVALAIGLPLGVLAARQPLAWKLTRPLLDLMQTMPAFVYLI 148

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             V   S   +   +   +     +   ++   + G    P+D  E   SF  +  +   
Sbjct: 149 PAVMLFSTGAVPAIIATVVF----SMPPVVRLTVLGIQQVPSDLIEAGRSFGCSERQLLF 204

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +  P   P  +TG       + +  +++ +   G +          +    ++ +    
Sbjct: 205 KVQWPNALPTVMTGVNQTIMLSLSMVVIASMIGGGGLGDV-------VLRGIQQLNIGLG 257

Query: 556 VLGVLIMCCFVLALNRF 572
             G L +    + L+R 
Sbjct: 258 FEGGLAVVILAVILDRL 274


>gi|260682599|ref|YP_003213884.1| glycine betaine/carnitine/choline ABC transporter substrate-binding
           protein [Clostridium difficile CD196]
 gi|260686199|ref|YP_003217332.1| glycine betaine/carnitine/choline ABC transporter substrate-binding
           protein [Clostridium difficile R20291]
 gi|260208762|emb|CBA61625.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile CD196]
 gi|260212215|emb|CBE02912.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile R20291]
          Length = 517

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 84/216 (38%), Gaps = 15/216 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L    + +   +     +++++I+++       + ++   L   ++  ++++Q++P +
Sbjct: 10  ILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSM 69

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AIF +    +  +  + Y  + +I   + E ++   
Sbjct: 70  ALLGLLVPILGIG--------SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIG 121

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   +
Sbjct: 122 LTRNQTLFKIQFPLALPIIMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGV 174

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   IL   +    +  L D L  +  +  + K
Sbjct: 175 QTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK 210



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 29  VTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----SK 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 85  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 145 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 197

Query: 571 RFL 573
              
Sbjct: 198 YLF 200


>gi|302544621|ref|ZP_07296963.1| putative glycine betaine ABC transporter integral membrane protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302462239|gb|EFL25332.1| putative glycine betaine ABC transporter integral membrane protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 644

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 83/529 (15%), Positives = 160/529 (30%), Gaps = 51/529 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M  A+  S++   +       S     VL P+LD MQ +P   +L   V+ F 
Sbjct: 132 TMQTLALMAVAVTASVVIGGLLGLAGGLSELAFRVLRPVLDTMQVLPAFAYLLPVVMIFG 191

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N  PG        A+ A        M       L      + E   S   +  Q+     
Sbjct: 192 NGVPG--------AVLATVIYAAPPMARLTALGLRGADAGVLEAVASLGATWRQRLLSAR 243

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P +   L+  +  ++       V + +I  G       G+G  +  A+   D+   L A
Sbjct: 244 FPLARKELLLGINQTIMMALSMAVIASVIGGG-------GLGDRVYQALSSVDVGKALAA 296

Query: 245 MLTMLGVIFLYDQ------------------LLFRPMIVWSNKFRLERTTGIYPADSWVL 286
            L ++ +  + D+                   L R    W+    +     +    S   
Sbjct: 297 GLPIVLLAVVMDRTIGVAGERLGAPPAEGGSRLLRGWPAWAGVAVITAVITVAGRLSGSQ 356

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
                      I      F   + +++      +G     +  N+L+   +     +  I
Sbjct: 357 TWPGG--LTVAIEGPVNQFKEWIVDHIYTGVPVVGGT-AEWAANYLKWVLDPLREGLQGI 413

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLIIIASIIWI 402
            W+ ++  VA               T       VL V      T+ +V+  +++  ++  
Sbjct: 414 PWYGILLIVAALAWLIGTWATALTATAAMAAIGVLGVWEPSMDTLSQVLAAVVVTLVLGF 473

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GIW      +   ++P   +    P  V+   VV+              +  +     
Sbjct: 474 AIGIWAARSARLERMLRPVLDVCQTMPQFVYLIPVVALFDVGRAPAAAAAIVYALPA--- 530

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G         E A S   T  +  R + LP   P  +              +
Sbjct: 531 -VIRITAQGIRNVDPSALESARSLGATQGQQLRQVQLPLARPALLLAVNQGVVLVLAVVV 589

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +  +   G        LG  +     +G     ++  + + C  L L+R
Sbjct: 590 IGGLVGSGA-------LGYDVLFGLAQGDLATGLVAGVAIVCLGLMLDR 631



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 92/228 (40%), Gaps = 15/228 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I   L  +  T             + V  + + +  T  ++L+A+V++L+  F     A
Sbjct: 420 LIVAALAWLIGTWATALTATAAMAAIGVLGVWEPSMDTLSQVLAAVVVTLVLGFAIGIWA 479

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+S RL  +L P+LD+ Q++P   +L   V  F          A + A+ A+        
Sbjct: 480 ARSARLERMLRPVLDVCQTMPQFVYLIPVVALFDVGRAPAAAAAIVYALPAVIRI----- 534

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                Q + N+     E +RS   +  Q+   + +P + P L+  +   +      VV  
Sbjct: 535 ---TAQGIRNVDPSALESARSLGATQGQQLRQVQLPLARPALLLAVNQGVVLVLAVVVIG 591

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            ++  G        +G  +   + + DL   L A + ++ +  + D++
Sbjct: 592 GLVGSGA-------LGYDVLFGLAQGDLATGLVAGVAIVCLGLMLDRV 632



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L + W  V  G+ + +AW+  G  V   T   +     LG       T+  + V +  +
Sbjct: 88  LLALGWAGVTAGLTL-LAWRVAGVRVAVTTLVSLAVCGVLGMWVPTMQTLALMAVAVTAS 146

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I   +G+  G        ++P    +   PA  +   VV           L   +   
Sbjct: 147 VVIGGLLGLAGGLSELAFRVLRPVLDTMQVLPAFAYLLPVVMIFGNGVPGAVLATVIY-- 204

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +      G         E  +S   T  +       P      + G       A
Sbjct: 205 --AAPPMARLTALGLRGADAGVLEAVASLGATWRQRLLSARFPLARKELLLGINQTIMMA 262

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++++ V   G       GLG  + ++       + +   L +    + ++R +
Sbjct: 263 LSMAVIASVIGGG-------GLGDRVYQALSSVDVGKALAAGLPIVLLAVVMDRTI 311


>gi|94265174|ref|ZP_01288937.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
 gi|93454362|gb|EAT04666.1| Binding-protein-dependent transport systems inner membrane
           component [delta proteobacterium MLMS-1]
          Length = 277

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79
            L A  + +  + ++       +    I  I+ + L +   L    + T   +L++ + +
Sbjct: 45  GLQAIPVWLLFLILVGLCWWRVSWRFAIFAILALGLIMGMDLWTETTNTLSLVLASALAA 104

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+         ++S  +  ++ P+LD+MQ++P   +L    ++F     G V GA    +
Sbjct: 105 LIIGLPVGVAMSRSDTVEAIIRPLLDLMQTMPPFVYLIPAAIFFGL---GTVPGAIATVV 161

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F      +  +       +  + R+  E   +F  +  Q    + +P ++P ++  +  +
Sbjct: 162 F-----CMPPVVRLTNLGIRQVNREQIEAGLAFGCNRRQLLTKIQLPLALPSIMAGVNQT 216

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +      VV + MI  G       G+G+ +   I+  D+       L ++ +  L D++
Sbjct: 217 IMLALSMVVIASMIGAG-------GLGNTVLTGIQRLDVGLGFEGGLGVVILAILLDRI 268



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + + +  +V      ++W+   + +        + +      T+  V+   + A II +P
Sbjct: 51  VWLLFLILVGLCWWRVSWRFAIFAILALGLIMGMDLWTETTNTLSLVLASALAALIIGLP 110

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+ +     + + I+P   L+   P  V+            +   +   +         
Sbjct: 111 VGVAMSRSDTVEAIIRPLLDLMQTMPPFVYLIPAAIFFGLGTVPGAIATVVF----CMPP 166

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G      +  E   +F     +    I LP   P  + G       A +  ++
Sbjct: 167 VVRLTNLGIRQVNREQIEAGLAFGCNRRQLLTKIQLPLALPSIMAGVNQTIMLALSMVVI 226

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +   G       GLG  +    ++        G L +    + L+R 
Sbjct: 227 ASMIGAG-------GLGNTVLTGIQRLDVGLGFEGGLGVVILAILLDRI 268


>gi|322805954|emb|CBZ03519.1| L-proline glycine betaine binding ABC transporter protein proX (TC
           3.A.1.12.1) / Osmotic adaptation [Clostridium botulinum
           H04402 065]
          Length = 528

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A++I+++       +  K++++  +++   ++ Q+IP L  L F +           
Sbjct: 26  TLIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 81  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    +   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGVRIA------SVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 191 ALIIDWITGR 200



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I +P+GI I     I++ +  FA L  A P+      ++  +       + 
Sbjct: 27  LIAVLIAVVIGVPLGIIITKNKKIANIVIGFANLTQAIPSLAILGFLIPLIGIG----SA 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFVGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALIID 195


>gi|226309342|ref|YP_002769302.1| aliphatic sulfonates ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226188459|dbj|BAH36563.1| putative aliphatic sulfonates ABC transporter permease protein
           [Rhodococcus erythropolis PR4]
          Length = 285

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 97/270 (35%), Gaps = 25/270 (9%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--------TVPRDIVDIVPITLDVH 59
           P +   R  P    +    LV  ++         T          P  +           
Sbjct: 23  PRYRRNRSRPKWVSIPLRFLVPALLVAGWWIGSATGLIREEILAGPPAVWTAFAELYQSG 82

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L  +   +  R    + + ++   V   L+  S     ++   + I +++P L  +   
Sbjct: 83  QLVDFGLASLQRAALGVSVGVIVGLVLGVLSGLSSLGEELIDSTMQINRAVPFLALVPLF 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F           E   +  I  + V  M    Y  +  + R + E ++ F L+GW+ 
Sbjct: 143 IAWFGID--------ETFKVILIAVATVAPMYAYTYLGVRGVDRKMVEAAQGFGLTGWRL 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +   +P ++PG++  + + +S     ++A+E +          GIG  + LA +     
Sbjct: 195 VFGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTD 248

Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            ++  ++    +  ++D   +L+ R  + W
Sbjct: 249 YMVLCIVMYAALGLIFDAVVRLIERYSMPW 278



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 20/274 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-T 372
            +L           P+           + ++  +W     G+           +   F  
Sbjct: 18  PQLETPRYRRNRSRPKWVSIPLRFLVPALLVAGWWIGSATGLIREEILAGPPAVWTAFAE 77

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++  G  ++ R  + + +  I+ + +G+  G        I    Q+  A P   
Sbjct: 78  LYQSGQLVDFGLASLQRAALGVSVGVIVGLVLGVLSGLSSLGEELIDSTMQINRAVPFLA 137

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL ++           +  +L+   T   +      G         E A  F +TGWR
Sbjct: 138 LVPLFIAWFGI----DETFKVILIAVATVAPMYAYTYLGVRGVDRKMVEAAQGFGLTGWR 193

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
                ILP   P  + G       +    I +E            G+G  +  + E    
Sbjct: 194 LVFGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRT 247

Query: 553 PEVVLGVLIMCCFVLALNRFL---------WHPL 577
             +VL +++     L  +  +         W  L
Sbjct: 248 DYMVLCIVMYAALGLIFDAVVRLIERYSMPWRRL 281


>gi|319440158|ref|ZP_07989314.1| taurine transporter subunit [Corynebacterium variabile DSM 44702]
          Length = 270

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 71/181 (39%), Gaps = 10/181 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R+ V +   +++ I VG  +G    + S ++P+   L A P   +  L++     
Sbjct: 77  LATIERISVSLGAGTVVGILVGWGLGSSAAVRSIVEPYLSFLRALPPLGYIGLLIVWFGI 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L+   +   +    ++G +    D+     S      + +R ++LPG  
Sbjct: 137 GDQSK----VVLLFLASFPTVAGATLSGVTGVRRDWVLATQSLGANRRQVFRTVLLPGAL 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W+A + +E+      +    G+G     S  +      +  ++++ 
Sbjct: 193 PDIINGIRLASGLCWSAIVAAEM------NDGIPGIGGLAYISGTQMDTALAIACIIVIG 246

Query: 564 C 564
            
Sbjct: 247 V 247



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 14/207 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P    +     +  + L Q+   T  R+  ++    +   +       S  +  ++ P 
Sbjct: 55  APSASSNRQECGVQGYFLWQHLLATIERISVSLGAGTVVGILVGWGLGSSAAVRSIVEPY 114

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L  ++++P LG++   +V+F      KV+   LA+   +  + +          +  + R
Sbjct: 115 LSFLRALPPLGYIGLLIVWFGIGDQSKVVLLFLASFPTVAGATL--------SGVTGVRR 166

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D    ++S   +  Q F  + +P ++P ++  + ++    W  +VA+EM         +P
Sbjct: 167 DWVLATQSLGANRRQVFRTVLLPGALPDIINGIRLASGLCWSAIVAAEM------NDGIP 220

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLG 250
           GIG    ++  + D    +  ++ +  
Sbjct: 221 GIGGLAYISGTQMDTALAIACIIVIGV 247


>gi|296115591|ref|ZP_06834218.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977840|gb|EFG84591.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Gluconacetobacter hansenii ATCC
           23769]
          Length = 296

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 11/250 (4%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCI 385
            P   L+        ++L  +      G+       +   +V+          ++    I
Sbjct: 43  SPPPALRYGWLAGPVFLLAYWAAASASGLIDTRILPAPWVVVSTGVDLVHDGRLLGNLLI 102

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R V   +I  +  I + +  G        +   AQ+  A PA    P  +       
Sbjct: 103 SLVRAVEGFVIGGLAGIALALLSGLSRAGDYFVDGIAQVKRAVPAVALIPFFILWFGV-- 160

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++  G    +  +      A    + E+A +  I  W++  +I+LPG  P 
Sbjct: 161 --DEGMKIMVIAVGAFTPVYLHTHTALRAIDIRYVELAETLRIGYWKFVWHIVLPGALPG 218

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A    +V E  +       T+G+G  I  +        +++G++     
Sbjct: 219 MMLGLRFGVMAALLGLVVVEEVN------ATSGIGYMIDLARTYAQSDVMLVGLVTYVVI 272

Query: 566 VLALNRFLWH 575
            +  ++ L  
Sbjct: 273 GVIADQTLLR 282



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 82/220 (37%), Gaps = 14/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V      +    L      + +R +   VI  L     A L+  SR     + 
Sbjct: 77  LPAPWVVVSTGVDLVHDGRLLGNLLISLVRAVEGFVIGGLAGIALALLSGLSRAGDYFVD 136

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I  + +++P +  + F +++F      K        I  I       +    + +L  I
Sbjct: 137 GIAQVKRAVPAVALIPFFILWFGVDEGMK--------IMVIAVGAFTPVYLHTHTALRAI 188

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++ + R+  W+  W++ +P ++PG++  +   +      +V  E       V  
Sbjct: 189 DIRYVELAETLRIGYWKFVWHIVLPGALPGMMLGLRFGVMAALLGLVVVE------EVNA 242

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG  I LA        +L  ++T + +  + DQ L R
Sbjct: 243 TSGIGYMIDLARTYAQSDVMLVGLVTYVVIGVIADQTLLR 282


>gi|163940536|ref|YP_001645420.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
 gi|163862733|gb|ABY43792.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
          Length = 278

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIIGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAIVMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  LSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIIGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|229494707|ref|ZP_04388465.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rhodococcus erythropolis SK121]
 gi|229318374|gb|EEN84237.1| putative aliphatic sulfonates transport permease protein SsuC
           [Rhodococcus erythropolis SK121]
          Length = 284

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 21/268 (7%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            +P +   ++   +   +R   P   + + +    +  +D   F      +    W +  
Sbjct: 21  IAPRTAKRRRSRLSDTALRASVPVALVTVWALGSATGRIDEKVFP-----SPWSVWSAFV 75

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V      + L V      ++ RV +   I   + + +GI  G        + P  Q+L
Sbjct: 76  ELVTTGVLWENLSV------SLARVAIGFTIGGALGLSLGIASGLFALADKLVDPTLQML 129

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++           + ++   +F     +  N  +G         E    
Sbjct: 130 RTIPFLAITPLLILWFGIDERPKIIIIAAAALF----PLYINTHSGVRNVDRKVIEAGRV 185

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F + G    R +ILP + P  + G   +   +  A IV+E+++         GLG  +  
Sbjct: 186 FGLRGLGLIRQVILPEMIPSVLVGLRVSLSVSLLALIVAELSNAPK------GLGFLMTS 239

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +      +V+ V+I   + L+++  +
Sbjct: 240 AQQYFQTDVLVVVVIIYAIWGLSVDLLV 267



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +       +    L +  S +  R+     I           +        ++ P
Sbjct: 65  PSPWSVWSAFVELVTTGVLWENLSVSLARVAIGFTIGGALGLSLGIASGLFALADKLVDP 124

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++++IP L      +++F      K+I    AA+F         +  + +  + N+ 
Sbjct: 125 TLQMLRTIPFLAITPLLILWFGIDERPKIIIIAAAALF--------PLYINTHSGVRNVD 176

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R + E  R F L G      + +P  +P ++  + +S+S     ++ +E+          
Sbjct: 177 RKVIEAGRVFGLRGLGLIRQVILPEMIPSVLVGLRVSLSVSLLALIVAEL------SNAP 230

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  +  A +      ++  ++         D L+
Sbjct: 231 KGLGFLMTSAQQYFQTDVLVVVVIIYAIWGLSVDLLV 267


>gi|254000341|ref|YP_003052404.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|253987020|gb|ACT51877.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
          Length = 251

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 81/235 (34%), Gaps = 10/235 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W  V       I  Q    +     +     ++     ++        +A+++ +
Sbjct: 17  FLLLCWVLVASRFPSYILPQPWEVMAEAQRWIADGSLLKHLKASLLEEAGGFALATLVAL 76

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G   G        I P   L  A P   + PL +      +      + +++     +
Sbjct: 77  LLGTAAGLFRRFRDFISPLNSLFMAIPPVAWAPLTMIIFGLGY----WSIVMVIFIAAVF 132

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  G  +  N     A +   T  +   ++ +P   P++          AW A +
Sbjct: 133 PMAITMQEGIQSIRNGEVRAARTLGATPLQMIVHVYMPASLPFFTAALRIGFSQAWRALV 192

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            +E+         + G+G  ++   + G+  +V+LG++I+      +   ++  L
Sbjct: 193 AAEMIG------ASKGIGWMVSMGGQVGNTNQVLLGIVIIGLIAWLMESLVFKRL 241



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 102/252 (40%), Gaps = 14/252 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L F+L+  ++            P +++      +   SL ++   + L       ++
Sbjct: 12  WASLPFLLLCWVLVASRFPSYILPQPWEVMAEAQRWIADGSLLKHLKASLLEEAGGFALA 71

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L   +  T A   RR    + P+  +  +IP + +   T++ F   Y         + +
Sbjct: 72  TLVALLLGTAAGLFRRFRDFISPLNSLFMAIPPVAWAPLTMIIFGLGY--------WSIV 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF + V+ M  +M + + +I       +R+   +  Q   ++ +P S+P     + + 
Sbjct: 124 MVIFIAAVFPMAITMQEGIQSIRNGEVRAARTLGATPLQMIVHVYMPASLPFFTAALRIG 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            S  W  +VA+EMI          GIG  +++  +  +   +L  ++ +  + +L + L+
Sbjct: 184 FSQAWRALVAAEMIGASK------GIGWMVSMGGQVGNTNQVLLGIVIIGLIAWLMESLV 237

Query: 260 FRPMIVWSNKFR 271
           F+ +      +R
Sbjct: 238 FKRLEKHYQTWR 249


>gi|240141231|ref|YP_002965711.1| putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens AM1]
 gi|240011208|gb|ACS42434.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens AM1]
          Length = 250

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 17/231 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   +       +    +  +    L                 +  
Sbjct: 35  LPPPSSIPAAFAREITNGAWLTAVVESLSHYVVGLGAGALAGVALGLATGMFAWFDSLTA 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I+ +++ IP L ++ F +++F             AA+F I     W + F+   ++ ++
Sbjct: 95  GIVRLLRPIPGLAWVPFAIIWFGV--------QPSAAVFIIAIGVFWIVFFATQGAVRHV 146

Query: 162 PRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
            RDL EV+++F       +   + +P + PG++  +  ++   W  VVA+E+  V     
Sbjct: 147 DRDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV----- 201

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             PGIG+ +  A        ++  MLTM G+  L+D   F  +  W  ++R
Sbjct: 202 --PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFDT-GFVALQGWLLRWR 249



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   VV +   ++  + +G+  G      S      +LL   P   + P  +       
Sbjct: 61  SLSHYVVGLGAGALAGVALGLATGMFAWFDSLTAGIVRLLRPIPGLAWVPFAIIWFGVQP 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504
                    ++  G  W + F           D  EVA +F   G       I+LP   P
Sbjct: 121 S----AAVFIIAIGVFWIVFFATQGAVRHVDRDLIEVAQAFGFRGPLARLTKILLPAATP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  TA G AW A + +E+           G+GA + +++   S   VV+ +L M  
Sbjct: 177 GILVGLRTALGQAWMAVVAAEIFG-------VPGIGARMMQASSLLSTDIVVVYMLTMAG 229

Query: 565 FVLALN 570
                +
Sbjct: 230 LYGLFD 235


>gi|219669918|ref|YP_002460353.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219540178|gb|ACL21917.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 255

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 107/242 (44%), Gaps = 16/242 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS--RTTLRMLSAMVIS 79
           LL+F++VI +  +L        VP     +  I   + S   YA    T  R+L+ + + 
Sbjct: 15  LLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIYRILTSPDLYAMIPLTAGRLLAGLSLG 74

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +    V   L     ++  VL P++ IMQ++P + ++   +V+F              A+
Sbjct: 75  VSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFGFNG--------KPAV 126

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  S +  +T ++      I ++L E++  +R S  ++  ++ +P  +P       ++
Sbjct: 127 FIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIA 186

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  GW   V +E++   D      GIG  I L     +  +I+   + ++ + +L D L+
Sbjct: 187 LGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLSDFLI 240

Query: 260 FR 261
            +
Sbjct: 241 GK 242



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T  R++  + +   + + +GI +G    +   + P   ++   P   +  L +    + 
Sbjct: 62  LTAGRLLAGLSLGVSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFGFN 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++I  T   I  NV AG      +  E+AS +  +  +  R++ILP I P
Sbjct: 122 GK----PAVFIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A G  W  ++++EV +       + G+G  I           ++   +++  
Sbjct: 178 YFKSAFQIALGSGWKIAVMAEVLT------TSDGIGGMIKLGRLNVEPESIIAWSILVVL 231

Query: 565 FVLALNRFLWHPLYL 579
                +  +   L+ 
Sbjct: 232 LFYLSDFLIGKFLFR 246


>gi|114567251|ref|YP_754405.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338186|gb|ABI69034.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 283

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 15/230 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           I  + ++        V   +  ++  T+ +      A  T   ++ +++ISLL       
Sbjct: 56  IIAVMVIAWRQTHEVVKTIMPGLLLFTVGIFGFWGIAMETLGIVIVSVIISLLLGIPLGI 115

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
             A S R   ++ PILD MQ++P   +L   ++ F     GKV G     I+A     + 
Sbjct: 116 AMAVSDRCNTMVTPILDAMQTMPSFVYLIPALMLFGL---GKVPGVVATVIYA-----LP 167

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +       +  +P  ++E + +F  + WQ    + +P +MP ++  +  +       VV
Sbjct: 168 PVVRLTNLGIRQVPSSVQEAALAFGATSWQLMKEVRIPLAMPSILAGINQTTMMALAMVV 227

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            + MI  G       G+G  + +     D+     A   ++ +  + D+L
Sbjct: 228 IASMIGAG-------GMGEVVLICTNRIDVGGGFEAGWAIVVLAIVIDRL 270



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 17/262 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
             T+    F    + + L    ++ ++L    + +     + IAW+    +V       +
Sbjct: 20  WITVAWEPFFTAFSNMVLGMLLQIEHILVAIPWWLWIIAVMVIAWRQTHEVVKTIMPGLL 79

Query: 377 LYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           L+ + +         T+  V+V +II+ ++ IP+GI +      ++ + P    +   P+
Sbjct: 80  LFTVGIFGFWGIAMETLGIVIVSVIISLLLGIPLGIAMAVSDRCNTMVTPILDAMQTMPS 139

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+    +       +   +   +         ++     G    P+  +E A +F  T 
Sbjct: 140 FVYLIPALMLFGLGKVPGVVATVIY----ALPPVVRLTNLGIRQVPSSVQEAALAFGATS 195

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+  + + +P   P  + G       A    +++ +   G       G+G  +   T + 
Sbjct: 196 WQLMKEVRIPLAMPSILAGINQTTMMALAMVVIASMIGAG-------GMGEVVLICTNRI 248

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
                      +    + ++R 
Sbjct: 249 DVGGGFEAGWAIVVLAIVIDRL 270


>gi|23009762|ref|ZP_00050690.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 126

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + W I+ N   G    P D++ VA+   +    ++  I+LP   PY  TG     G +W 
Sbjct: 5   SIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWL 64

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A + +E+   G       G+G +I ++       E+++ ++ +      L+R +
Sbjct: 65  AIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRLV 112



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +W +  +    + NIP+D   V+   RL+  + F  + +P + P +   + + +   W 
Sbjct: 5   SIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWL 64

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +VA+EM++ G       GIG +I  A     +  I+ A++ +  + F+ D+L+
Sbjct: 65  AIVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRLV 112


>gi|311070951|ref|YP_003975874.1| glycine betaine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871468|gb|ADP34943.1| glycine betaine ABC transporter (permease) [Bacillus atrophaeus
           1942]
          Length = 282

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +++ +I   L     T        I  + +D         +T   +L++++IS++     
Sbjct: 52  ILLTLIFAALAWWISTRGIALFTLIGFLVIDYLGYWDPMLQTLALVLTSVIISVVVGVPI 111

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
              A++   +  ++ PILD+MQ++P   +L   + +F     G V G   + IFA+    
Sbjct: 112 GVWASQKESVRRIVTPILDLMQTMPAFVYLLPAIFFF---NIGVVPGVVASVIFAMP--- 165

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                      +  +P DL E + +F  +  Q+ + + +P +   ++  +  S+      
Sbjct: 166 --PTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSIMLALSM 223

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + M+         PG+GS +  A+ +      + A + ++ V    D++
Sbjct: 224 VVIAAMV-------GAPGLGSEVYSAVTQLKTGIGVEAGIAIVIVAITLDRI 268



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 83/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLI 394
           +   L      ++  +   +AW      +  FT    L + +LG       T+  V+  +
Sbjct: 42  IVTGLGYIPSILLTLIFAALAWWISTRGIALFTLIGFLVIDYLGYWDPMLQTLALVLTSV 101

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           II+ ++ +P+G+W   +  +   + P   L+   PA V+    +   +   +   +   +
Sbjct: 102 IISVVVGVPIGVWASQKESVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASVI 161

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +   + G    P D  E   +F  T  +    + LP      + G   + 
Sbjct: 162 F----AMPPTIRMTVLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSI 217

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A +  +++ +           GLG+ +  +  +      V   + +    + L+R 
Sbjct: 218 MLALSMVVIAAMVG-------APGLGSEVYSAVTQLKTGIGVEAGIAIVIVAITLDRI 268


>gi|269925524|ref|YP_003322147.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
 gi|269789184|gb|ACZ41325.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 271

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 100/259 (38%), Gaps = 23/259 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE------TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++  +   L++ I+      +           P ++      +L   +   +   T L 
Sbjct: 25  SLWGWVIASLILAILLWEAIVLVGKYPTYILPTPMEVWQRFLQSLADGTWWTHTRITLLE 84

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    +      V+  + A  R +  +L P +   Q++P++       ++F     GKV
Sbjct: 85  SILGFALGFGVAAVFGYILAHWRAVERLLSPHIAASQALPVVAIAPLITLWFGYGLLGKV 144

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   L   F         +  +    + N+PRDL EV++ +    WQ FW + +P S+P 
Sbjct: 145 IVCALVVFF--------PILVNTIVGIRNVPRDLIEVAQVYGAGWWQTFWMVELPLSLPV 196

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + + ++      V  E +          G+G  + ++    D   +  A++T+  +
Sbjct: 197 LLGGIRLGLTLSITGAVVGEFVG------ADVGLGVLLNISKGMFDTPLMFVALITLALM 250

Query: 252 IFLY---DQLLFRPMIVWS 267
              +     LL + ++ W 
Sbjct: 251 AASFYGIALLLEKILLAWH 269



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------ITMFRVVVLIIIASI 399
           I    +   + +   + +         +Q  L  +  G       IT+   ++   +   
Sbjct: 35  ILAILLWEAIVLVGKYPTYILPTPMEVWQRFLQSLADGTWWTHTRITLLESILGFALGFG 94

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +    G  +     +   + P      A P     PL+     Y  L   +  +L++ F 
Sbjct: 95  VAAVFGYILAHWRAVERLLSPHIAASQALPVVAIAPLITLWFGYGLLGKVIVCALVVFF- 153

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL N I G    P D  EVA  +    W+ +  + LP   P  + G       +  
Sbjct: 154 ---PILVNTIVGIRNVPRDLIEVAQVYGAGWWQTFWMVELPLSLPVLLGGIRLGLTLSIT 210

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++V E            GLG  +  S      P + + ++ +   
Sbjct: 211 GAVVGEFVG------ADVGLGVLLNISKGMFDTPLMFVALITLALM 250


>gi|158424792|ref|YP_001526084.1| sulfate ester transporter permease component [Azorhizobium
           caulinodans ORS 571]
 gi|158331681|dbj|BAF89166.1| sulfate ester transporter permease component [Azorhizobium
           caulinodans ORS 571]
          Length = 265

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 9/196 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R +    I S++ I  G+ +G  P  +    P            + P+
Sbjct: 66  GDLFLHLGASLARNLTGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVLAWIPI 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +     +      +++++            N I G ++ P    EV+     +  +  R 
Sbjct: 126 ISVWFGFAETAKVVFVAVAAFVPVA----LNTIEGVASAPKALVEVSDVLTFSRRQRIRR 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  +TG       AW A++ +E            G+G  I    E+     V+
Sbjct: 182 VYLPSALPSILTGIHLGLIYAWLATVAAEYFM-----TVGPGIGGLIIAGRERFQMELVM 236

Query: 557 LGVLIMCCFVLALNRF 572
           LGV+I+      LN  
Sbjct: 237 LGVVILGAVGFLLNHI 252



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 16/211 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   +  R L+   I  +    +  L   S     +  P     + I +L ++  
Sbjct: 66  GDLFLHLGASLARNLTGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVLAWIPI 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             V+F          AE A +  +  +    +  +  + + + P+ L EVS     S  Q
Sbjct: 126 ISVWFG--------FAETAKVVFVAVAAFVPVALNTIEGVASAPKALVEVSDVLTFSRRQ 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  + + +   W   VA+E  +        PGIG  I    +   +
Sbjct: 178 RIRRVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVG-----PGIGGLIIAGRERFQM 232

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  ++ +  V FL +    L+   ++ W
Sbjct: 233 ELVMLGVVILGAVGFLLNHIATLIEARLLRW 263


>gi|222055586|ref|YP_002537948.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564875|gb|ACM20847.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 276

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 84/210 (40%), Gaps = 11/210 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQ 423
             +V      +   ++    +++ R    ++ A++I +P+G+ +G + P +   ++P  +
Sbjct: 48  SVLVTIRGLLENGDLLTHTLVSLQRAFSGLLAATLIGLPLGLVLGGWFPRLQQALEPLME 107

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L A     +   +++  +        +     + +   W I F+ IAG         + A
Sbjct: 108 LFAQANPVILAHIIIFFLGIG----EVAKIFTICWLCIWPITFSTIAGIRDVDPQLMKAA 163

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S  +  W+ + ++ LP   P + TG   A G A+   I SE+         + GLG  +
Sbjct: 164 RSLGLGRWQLFLHVALPASAPSFFTGLRLAAGYAFLMLIASEMMG------ASNGLGWLV 217

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +S E      +  G  I+    +  +  L
Sbjct: 218 MQSQENYHIQRIFAGATIITALAVLTDLLL 247



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 20/218 (9%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILD-IMQSIPIL 113
           L+   L  +   +  R  S ++ + L       +      RL   L P+++   Q+ P++
Sbjct: 57  LENGDLLTHTLVSLQRAFSGLLAATLIGLPLGLVLGGWFPRLQQALEPLMELFAQANPVI 116

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +++F+ +        E+A IF I    +W +TFS    + ++   L + +RS  
Sbjct: 117 --LAHIIIFFLGIG-------EVAKIFTICWLCIWPITFSTIAGIRDVDPQLMKAARSLG 167

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L  WQ F ++ +P S P     + ++    +  ++ASEM+   +      G+G  +  + 
Sbjct: 168 LGRWQLFLHVALPASAPSFFTGLRLAAGYAFLMLIASEMMGASN------GLGWLVMQSQ 221

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268
           +   +  I      +  +  L D L   L +  +VW++
Sbjct: 222 ENYHIQRIFAGATIITALAVLTDLLLKVLEKRTLVWTD 259


>gi|239983649|ref|ZP_04706173.1| ABC transporter permease protein [Streptomyces albus J1074]
          Length = 264

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 21/265 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P    +      +  +  +          I  A  +I  +           +    
Sbjct: 10  RSRVPRWVRRTSGPLLLLALWQVLSGTGALPADILAAPGTIARVA--VDLVADGSLPSAM 67

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ RV V +++  ++ I + +  G        +    Q+L   P     PL +     
Sbjct: 68  AVSLQRVAVGLLLGLVVGIGLALVSGLFRVGEDLVDASVQMLRTVPFVGLIPLFIIWFGI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++  G  + +  NV AG         E   S  ++ W   R+++LPG  
Sbjct: 128 GEA----PKVAIITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   + G AW A + +E  +         G+G  + ++ +      +V+ +++  
Sbjct: 184 PGAMTGLRYSLGIAWLALVFAEQVN------ADAGIGYLMVQARDFLRTDVIVVCLIVYA 237

Query: 564 CFVLA-------LNRFL--WHPLYL 579
              L        L R L  W P + 
Sbjct: 238 FLGLLADFAVRTLERLLLQWRPTFT 262



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I  +    +   SLP   + +  R+   +++ L+     A ++   R    ++ 
Sbjct: 44  LAAPGTIARVAVDLVADGSLPSAMAVSLQRVAVGLLLGLVVGIGLALVSGLFRVGEDLVD 103

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++F           E   +  I    ++ +  ++Y  +  +
Sbjct: 104 ASVQMLRTVPFVGLIPLFIIWFGIG--------EAPKVAIITMGVMFPLYLNVYAGIRGV 155

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  LS W    ++ +P ++PG +  +  S+   W  +V +E +        
Sbjct: 156 DAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSLGIAWLALVFAEQV------NA 209

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
             GIG  +  A        I+  ++    +  L D     L R ++ W   F
Sbjct: 210 DAGIGYLMVQARDFLRTDVIVVCLIVYAFLGLLADFAVRTLERLLLQWRPTF 261


>gi|297191216|ref|ZP_06908614.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718505|gb|EDY62413.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 302

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 101/260 (38%), Gaps = 11/260 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P +  +   ++   ++    +    +   P  + D +       +L +    +  R
Sbjct: 47  KKVLPPLTAVALVLVAWQVLVWAEVTPDYKLPAPSTVWDGLSDMWLQGTLFEVIWTSVSR 106

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +++L        L ++ + +   + PIL  +QS+P + ++   V++         
Sbjct: 107 GLLGFLLALAIGTPLGLLVSRVKFVRAAIGPILSGLQSLPSVAWVPPAVIWLGLN----- 161

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +      I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 162 ---DSMMFAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVMPAALPG 218

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I     +      G  +       D+  +  A+L +L V
Sbjct: 219 YVAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNADMPGVFLAILLILIV 276

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
               D L+F P+  W  + R
Sbjct: 277 GIAIDLLVFSPLERWILRSR 296



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 14/260 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY-IVNHFTYQDVLYVIWLGCI-- 385
              ++    ++V   L      +V    +  A  +  Y +    T  D L  +WL     
Sbjct: 38  RTPVREVLLKKVLPPLTAVALVLVAWQVLVWAEVTPDYKLPAPSTVWDGLSDMWLQGTLF 97

Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R ++  ++A  I  P+G+ +     + + I P    L + P+  + P  V  
Sbjct: 98  EVIWTSVSRGLLGFLLALAIGTPLGLLVSRVKFVRAAIGPILSGLQSLPSVAWVPPAVIW 157

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       +  +  +++ G    I   +++G    P  F     +   TG R   +I++P
Sbjct: 158 LGL----NDSMMFAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVMP 213

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P YV G       +W + + +E+ +           G  +         P V L +L
Sbjct: 214 AALPGYVAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNADMPGVFLAIL 271

Query: 561 IMCCFVLALNRFLWHPLYLY 580
           ++    +A++  ++ PL  +
Sbjct: 272 LILIVGIAIDLLVFSPLERW 291


>gi|312197607|ref|YP_004017668.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311228943|gb|ADP81798.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 301

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 12/259 (4%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            L   L   R   P++  +L     +     +     +    I     ++  +   ++  
Sbjct: 38  ALADPLRPARRPVPKSLRRLLGPVLLVAFWQLGSSTGLIQPDILAGPWTV--LHTGYSLA 95

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               +     I++ RV + ++      + + +  G        +    Q+L A P     
Sbjct: 96  ADGTLGHNLAISLRRVALGLLFGVAAAVVLAVVAGLFQLGEDLVDAPVQILRAVPILGLV 155

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +                L+  GT + +  N  A        F E+A +  +      
Sbjct: 156 PLAILWFGIGEH----VKVFLVALGTAFPVYINTFAAIRGVDGRFVELARTVRLGRLALI 211

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LPG  P ++ G   A   +W   +VSE  +       ++G+G  + ++   G    
Sbjct: 212 RRVVLPGALPGFLVGLRFALTISWLILVVSEQIN------ASSGIGYLMDQARTFGQTDV 265

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G+ +     L  +  +
Sbjct: 266 IVVGLAVYGVLGLLSDALV 284



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++          +L    + +  R+   ++  +    V A +A   +    ++ 
Sbjct: 81  LAGPWTVLHTGYSLAADGTLGHNLAISLRRVALGLLFGVAAAVVLAVVAGLFQLGEDLVD 140

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + I++++PILG +   +++F           E   +F +     + +  + + ++  +
Sbjct: 141 APVQILRAVPILGLVPLAILWFGIG--------EHVKVFLVALGTAFPVYINTFAAIRGV 192

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R+ RL        + +P ++PG +  +  +++  W  +V SE I        
Sbjct: 193 DGRFVELARTVRLGRLALIRRVVLPGALPGFLVGLRFALTISWLILVVSEQINASS---- 248

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             GIG  +  A        I+  +     +  L D   +LL R  + W
Sbjct: 249 --GIGYLMDQARTFGQTDVIVVGLAVYGVLGLLSDALVRLLERRALAW 294


>gi|116495898|ref|YP_807632.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lactobacillus casei ATCC 334]
 gi|116106048|gb|ABJ71190.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lactobacillus casei ATCC 334]
          Length = 271

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 17/248 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
                  +  +  +V   +           A+   W +   +    T       +W    
Sbjct: 10  RPKPRTKRHINWFKVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGE 69

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 I+++R      I   I   +G+  G    I + +    Q+L   P       ++
Sbjct: 70  LPKNIAISLYRSTAGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPHLS----LI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  + I  N   G +    +  E+  ++ ++    +  II
Sbjct: 126 PLLIILIGIGESAKISLVAIGVMFPIYINTYQGITTANPELLEMGHAYGLSKRDLFTRII 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            PG  P  + G   A G  W   IV+E  S       ++GLG     + E      V+L 
Sbjct: 186 FPGALPNILMGVRYALGVMWTTLIVAETIS------SSSGLGYMATNAQEFMRMDTVLLC 239

Query: 559 VLIMCCFV 566
           +LI     
Sbjct: 240 ILIYALLG 247



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 90/258 (34%), Gaps = 17/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P I  L         ++           P  ++           LP+  + +  R  
Sbjct: 23  KVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGELPKNIAISLYRST 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   I     FV   +    R +  +L   + ++++IP         +  + L    +  
Sbjct: 83  AGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPH--------LSLIPLLIILIGI 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A I  +    ++ +  + YQ +     +L E+  ++ LS    F  +  P ++P ++
Sbjct: 135 GESAKISLVAIGVMFPIYINTYQGITTANPELLEMGHAYGLSKRDLFTRIIFPGALPNIL 194

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  +L  +L    +  
Sbjct: 195 MGVRYALGVMWTTLIVAETISSSS------GLGYMATNAQEFMRMDTVLLCILIYALLGK 248

Query: 254 LYDQL---LFRPMIVWSN 268
           + D +   L +  + W  
Sbjct: 249 VSDLIAKSLEKVFLSWRQ 266


>gi|258509612|ref|YP_003172363.1| ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257149539|emb|CAR88512.1| ABC transporter, permease protein [Lactobacillus rhamnosus GG]
 gi|259650878|dbj|BAI43040.1| glycine/betaine ABC transporter permease and substrate binding
           components [Lactobacillus rhamnosus GG]
          Length = 510

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L A++++++     A       ++  VL+ I  ++Q+IP L  L  
Sbjct: 13  GELLSALGQHIEISLIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+    +  +  + Y  L +I    EE + +F +S  +
Sbjct: 73  LIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFGMSRLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGIDRNDA 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L   L    +  ++  LL
Sbjct: 178 ALTLMGALAAALLAIVFSWLL 198



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+A +I IP+ +W+     +++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|296160379|ref|ZP_06843196.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295889360|gb|EFG69161.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 289

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 27/289 (9%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM--LDIFWFCVVCGVAIGIAWQSIGYIVN 369
           NV    R     R   P    +L      + +  + +     +  +A  + W    ++  
Sbjct: 10  NVALAERGKRPPRTVRPVRGWRLPGEGPTAALSAVSVTTLAALWWLATHLRWLPPLFLPT 69

Query: 370 HFTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                      W G I            +  RV     +A++  +PVGI +G        
Sbjct: 70  PEAVWAAFIDAWHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGL 129

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  +     P   + PLVV               +++       I     AG  +   
Sbjct: 130 LDPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIYLACFAPIAMAARAGVRSATI 185

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +    A S   +  +  R+++LP   P  +TG   A G  W   + +E+ +       T 
Sbjct: 186 EQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATA 239

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
           GLG  +  ++       VV+G++++       +   R L   L  +  R
Sbjct: 240 GLGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLAPWKGR 288



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++ + + LR+  A  ++ +       L   SR    +L P L+  + +P L +L   V
Sbjct: 91  LSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   S  Q  
Sbjct: 151 IWFGID--------ETAKIVVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGSFSQIV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 256

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + + +D   + L R +  W  +
Sbjct: 257 VVMGIVLIGLIAWFFDLGMRALERRLAPWKGR 288


>gi|170693015|ref|ZP_02884176.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142013|gb|EDT10180.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 292

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 99/258 (38%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIFDL-LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P  + +R+F   +   +   LV+  +  +   +    +         I      L     
Sbjct: 30  PLPLGKRVFAQSWVRKVLIALVLIAVWEIAARVVNNDLLLPTFGATFIAFVQGVLSGELL 89

Query: 67  R----TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    +   +L   ++     FV  +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 90  QKTAVSMSVLLRGYLLGAALAFVLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPIALLW 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  S +W +  + Y    ++P  L    R++ L+G +    
Sbjct: 150 FGLGTG--------SLLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLL 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     + 
Sbjct: 202 ILMPAALPSILAGLRVGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVF 259

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 260 AGLAAVIVIGLLIEHLVF 277



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 83/277 (29%), Gaps = 16/277 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L        E  L L         +      +V      IA + +   +   T+    
Sbjct: 17  RPLEPPGDIVLEAPLPLGKRVFAQSWVRKVLIALVLIAVWEIAARVVNNDLLLPTFGATF 76

Query: 378 YVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                G           ++M  ++   ++ + +   +             +     +   
Sbjct: 77  IAFVQGVLSGELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVSTRVGRDLLSMLTAMFNP 136

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    P+ +        +    L  +++    W +  N  +G  + P   +    ++ 
Sbjct: 137 LPSIALLPIALLWFGLGTGS----LLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYG 192

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +TG R    I++P   P  + G       AW   I +E+           GLG YI ++ 
Sbjct: 193 LTGMRHVLLILMPAALPSILAGLRVGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNR 250

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +     V  G+  +    L +   ++  L     R 
Sbjct: 251 NELYTDRVFAGLAAVIVIGLLIEHLVFDTLERVTVRR 287


>gi|226953977|ref|ZP_03824441.1| ABC transporter membrane protein [Acinetobacter sp. ATCC 27244]
 gi|226835271|gb|EEH67654.1| ABC transporter membrane protein [Acinetobacter sp. ATCC 27244]
          Length = 314

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFTAFFISSLIGIPLGILCGFSKTISQLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     ++I GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIIIGTLFQQILIIANTTRLVDRSLIEAGFTLGTNKTKSLFHVVIPAALPE 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 292 GLICDVIL 299



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
                P+  +     +    +   + +A  IS L       L   S+ +  +  P ++  
Sbjct: 102 AFTTPPVQANAPWFHESLWHSIKLVFTAFFISSLIGIPLGILCGFSKTISQLTEPFVEFF 161

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P   F    V         K        I  I    ++     +  +   + R L E
Sbjct: 162 RYLPAPAFGALAVAILGINDAPK--------IAIIIIGTLFQQILIIANTTRLVDRSLIE 213

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
              +   +  +  +++ +P ++P +  ++ + +   W +++ +E+I          GI  
Sbjct: 214 AGFTLGTNKTKSLFHVVIPAALPEIYRDLRVLLGWAWTYLIVAELIG------STSGITW 267

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +I    + Q+   +  A+L +  +  + D +L +
Sbjct: 268 FITQQARYQNFDNVYAAILIIGVIGLICDVILMK 301


>gi|271963332|ref|YP_003337528.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506507|gb|ACZ84785.1| ABC transporter permease protein [Streptosporangium roseum DSM
           43021]
          Length = 654

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 77/488 (15%), Positives = 155/488 (31%), Gaps = 30/488 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
                 +   G +  L  G +   V      +   +  V  L + +  T   +L+A+++S
Sbjct: 104 LGWAGLIGTAGALGQLAGGWRIALVAV----LGTGSFGVLGLWEASVDTLALVLAAVLLS 159

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           LL        A +S RL  +L P+LD+MQ +P   +L   V++F             +A 
Sbjct: 160 LLIGLPLGVAAGRSVRLRRLLTPVLDVMQIMPTFAYLAPMVLFFQIG--------PASAA 211

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +         ++  +     E S S   +  Q    + +P +   +   +  +
Sbjct: 212 VATMIYSIPPAIRITALAVEQVSPAAVEASASLGATRRQTLRKVHLPMARATIALAINQT 271

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      VV + +I         PG+GS I   +   D+  +L A + ++ +  + D++ 
Sbjct: 272 VMMALSMVVIAALIA-------APGLGSDIIRGLSRADVGVMLPAGIAIVVMAVVLDRIT 324

Query: 260 FRPMIVW---SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316
                     S+ F       +  A   V  +  +     F       F  P++  V   
Sbjct: 325 MAAAAREPVPSDAFSTLLRLSVPAAILVVTGIAARFLPAEFPREWVLRFAGPVNEAVNWA 384

Query: 317 CRTLG----VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
             +       IR    E  L        +    +    V+         +     V    
Sbjct: 385 KFSWYGATEAIRNGVTEALLNPLQTVLTTAPWWLVAAVVLAAGWRAAGARPAAAAVGCLL 444

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
              +L +      T+  V+  ++ A +  + +G+     P  ++  +P        PA V
Sbjct: 445 ATALLGLWQHTMETLTTVLAGVVPALVAGLALGVAAARSPRFAAVQRPLLDTAQTMPAFV 504

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +    ++                 +      ++  V  G         E A S   T  +
Sbjct: 505 YLLPALALFGATR----FTAIFASVIYAVPPVVRLVEDGIRNVSPVAVEAARSCGSTDRQ 560

Query: 493 WWRYIILP 500
               + LP
Sbjct: 561 LLWKVRLP 568


>gi|170721475|ref|YP_001749163.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169759478|gb|ACA72794.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 304

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 16/234 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F +++ +  +L   +    V    V    +T+ V  +   A  T   + +A+V   +   
Sbjct: 54  FPVMVLLTFVLFWRLANLRVALFSVAAY-VTIAVLGVWSEAMTTLSLITTAIVFCAVIGI 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                 A+S    MV+ P+LD+MQ+ P   +L   V+ F     G V G       A+ T
Sbjct: 113 PIGIWCARSPGAWMVVRPVLDVMQTTPTFVYLVPVVMLFGV---GNVPGE-----VAVAT 164

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           + +  +       +C +  ++ E  ++F  + WQ  W + +P +MP ++  +  ++    
Sbjct: 165 AAMPPLIRFTQLGICMVDSEIVEAGQAFGANKWQLLWEVQLPLAMPTILGGLNQTVLTAM 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              V   MI          G+G  +   I   D+       + ++ +  + D+ 
Sbjct: 225 VMSVVISMI-------GAEGLGLVVLQGIGRLDVGGAAVGGIAIVLLAIMLDRF 271



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 80/229 (34%), Gaps = 16/229 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIP 403
           F V+  +   + W+     V  F+    + +  LG       T+  +   I+  ++I IP
Sbjct: 54  FPVMVLLTFVLFWRLANLRVALFSVAAYVTIAVLGVWSEAMTTLSLITTAIVFCAVIGIP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW    P     ++P   ++   P  V+   VV      ++   + ++          
Sbjct: 114 IGIWCARSPGAWMVVRPVLDVMQTTPTFVYLVPVVMLFGVGNVPGEVAVA----TAAMPP 169

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++     G     ++  E   +F    W+    + LP   P  + G       A   S+V
Sbjct: 170 LIRFTQLGICMVDSEIVEAGQAFGANKWQLLWEVQLPLAMPTILGGLNQTVLTAMVMSVV 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +           GLG  + +   +       +G + +    + L+RF
Sbjct: 230 ISMIG-------AEGLGLVVLQGIGRLDVGGAAVGGIAIVLLAIMLDRF 271


>gi|221632347|ref|YP_002521568.1| putative ABC transport proteins, inner membrane component
           [Thermomicrobium roseum DSM 5159]
 gi|221156768|gb|ACM05895.1| putative ABC transport proteins, inner membrane component
           [Thermomicrobium roseum DSM 5159]
          Length = 277

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT++RV++  +I  +  + +G+ +G    +   + P        P +  FPL++      
Sbjct: 82  ITLWRVLLGTVIGGVPAVLIGLAMGMWRWLRLTLDPIIAATYPLPKSALFPLLLLIFGLG 141

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +++    G  +  + N + G  A    + +VA +F    W   R + LPG  P
Sbjct: 142 EGSKVSMVAI----GVFYLAVTNAMEGVLAINPVYFDVAKTFGARRWDVIRTVALPGAMP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G     G      +++E+           GLG  +  + +  S   +   + +   
Sbjct: 198 LVLAGLRLGVGTGLILGVLAEMLGARD------GLGYLLWSAWQTFSVSLLWATLFVTAI 251

Query: 565 FVLALNRFL 573
              A  + +
Sbjct: 252 LGFASVQLV 260



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 79/228 (34%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  IV      +    L  +   T  R+L   VI  +   +        R L + L P
Sbjct: 58  PAPSTIVGAFWDAITTGVLLHHLKITLWRVLLGTVIGGVPAVLIGLAMGMWRWLRLTLDP 117

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+     +P        ++ F      KV    +   +   T+ +        + +  I 
Sbjct: 118 IIAATYPLPKSALFPLLLLIFGLGEGSKVSMVAIGVFYLAVTNAM--------EGVLAIN 169

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +V+++F    W     + +P +MP ++  + + +  G    V +EM+   D     
Sbjct: 170 PVYFDVAKTFGARRWDVIRTVALPGAMPLVLAGLRLGVGTGLILGVLAEMLGARD----- 224

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
            G+G  +  A +   +  +   +     + F   QL   L R ++ W 
Sbjct: 225 -GLGYLLWSAWQTFSVSLLWATLFVTAILGFASVQLVDFLRRVLVPWQ 271


>gi|212697426|ref|ZP_03305554.1| hypothetical protein ANHYDRO_01996 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675618|gb|EEB35225.1| hypothetical protein ANHYDRO_01996 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 261

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 98/247 (39%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++  N     A +++  II  + +        P  +       +   S+ +    +  R+
Sbjct: 9   KLRKNFLVFFAILIIWQIIYKMRIFSPIYLPGPYKVFQTFLAMVYDGSIFENILASLYRV 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    ++  F+F+ A +      +      ILD +++IP LG +   +++          
Sbjct: 69  LVGYFLAFAFSFILALIFYLKADIFPYFSNILDFLKNIPPLGLVPLLILWVGIG------ 122

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E++ I  +F +  + +  ++ +      +D+ E+ R+F  +  + F  + +P S+  +
Sbjct: 123 --EVSKISIVFMASFFPIFLNIQKGFMEADKDMIEMGRAFSYNDREIFTKIVLPSSLKDI 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                + +   +  ++A+EM+          G+G  I  +        ++  +L +  V 
Sbjct: 181 FVGARIGLGYAYRSIIAAEMLAASK------GLGYLINFSRLMSRTDKVIVGILVIGFVG 234

Query: 253 FLYDQLL 259
            + D++ 
Sbjct: 235 MVSDKIF 241



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +++RV+V   +A      + +    +  I          L   P     PL
Sbjct: 55  GSIFENILASLYRVLVGYFLAFAFSFILALIFYLKADIFPYFSNILDFLKNIPPLGLVPL 114

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V    ++       ++   + + I  N+  G      D  E+  +F       +  
Sbjct: 115 LILWVGIGEVSK----ISIVFMASFFPIFLNIQKGFMEADKDMIEMGRAFSYNDREIFTK 170

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP        GA    G A+ + I +E+ +       + GLG  I  S       +V+
Sbjct: 171 IVLPSSLKDIFVGARIGLGYAYRSIIAAEMLA------ASKGLGYLINFSRLMSRTDKVI 224

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L++    +  ++  
Sbjct: 225 VGILVIGFVGMVSDKIF 241


>gi|222106175|ref|YP_002546966.1| ABC transporter permease protein [Agrobacterium vitis S4]
 gi|221737354|gb|ACM38250.1| ABC transporter permease protein [Agrobacterium vitis S4]
          Length = 289

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 91/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   ++  +    L          D +  +       +LP     T   +     +  +
Sbjct: 46  IVVLAIIWQVYASFLDNPLLFPTLSDTLVTLTDRFADGTLPARIWTTLQVLFMGYTVGTV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 106 LAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLG--------ASSLVFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     + R L  V  ++ L+G      + VP + P ++  + +  +
Sbjct: 158 LVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPSILTGLKIGWA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I       D+ A+   +LT++ +  + + L+F+
Sbjct: 218 FAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLDIPAVFAGLLTVIIIGLIVENLVFQ 275



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 6/190 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + +   + +++   + +        +  ++    +    PA    PL +       
Sbjct: 92  TLQVLFMGYTVGTVLAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLGA 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  +++    W +  N  +G        + V +++ +TG  +   I++P  FP 
Sbjct: 152 SS----LVFVLVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW   I +E+     +     GLG +I E+      P V  G+L +   
Sbjct: 208 ILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAVFAGLLTVIII 265

Query: 566 VLALNRFLWH 575
            L +   ++ 
Sbjct: 266 GLIVENLVFQ 275


>gi|290960352|ref|YP_003491534.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260649878|emb|CBG72994.1| putative transporter transmembrane subunit [Streptomyces scabiei
           87.22]
          Length = 308

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R      I     + + +  G      + I    QL  A P     PL +  +  
Sbjct: 113 LTSLQRAGTGFAIGLTAGVALALASGLSRVGEALIDATVQLNRAIPTLGLIPLFILWLGI 172

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +++++       I  N  A  +   + F E+A    ++ +R+ R I++PG  
Sbjct: 173 GETFKIAIIAIVVYI----PIYLNTHAALAGIDSRFVELAEVQGLSRFRFVRQIVIPGAL 228

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +  G      G+W   +V E  +       T GLG  + ++   G    +++G+++  
Sbjct: 229 PGFFVGLRLGVTGSWLGLVVLEQIN------ATNGLGYMMFQAQNYGQSDVILVGLVVYG 282

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L  +   R +   +  +
Sbjct: 283 IFGLISDSAVRLIERRVLSW 302



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +++         +L      +  R  +   I L      A  +  SR    ++  
Sbjct: 90  PAPWTVLETGVHLWTDGTLRTDILTSLQRAGTGFAIGLTAGVALALASGLSRVGEALIDA 149

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + + ++IP LG +   +++       K+    +     I+         + + +L  I 
Sbjct: 150 TVQLNRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYIPIY--------LNTHAALAGID 201

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E++    LS ++    + +P ++PG    + + ++G W  +V  E I   +     
Sbjct: 202 SRFVELAEVQGLSRFRFVRQIVIPGALPGFFVGLRLGVTGSWLGLVVLEQINATN----- 256

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            G+G  +  A        IL  ++       + D   +L+ R ++ W
Sbjct: 257 -GLGYMMFQAQNYGQSDVILVGLVVYGIFGLISDSAVRLIERRVLSW 302


>gi|260430953|ref|ZP_05784924.1| glycine betaine/proline ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414781|gb|EEX08040.1| glycine betaine/proline ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 713

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 80/597 (13%), Positives = 182/597 (30%), Gaps = 84/597 (14%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG++  L   +    +       +   L        +  T   +  ++ ++L+    
Sbjct: 96  PILIGLVTALGWYLGGLPMAALGFLGLSFVLASGY-WAESMNTLALVAVSVPVALIVGGA 154

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +  R+   +  +LDIMQ++P   +LT  ++ F     G V+G   +AI+A    
Sbjct: 155 IGILANEVPRVKSAVQAVLDIMQTVPTFAYLTPLLLLFGF---GPVVGLIASAIYA---- 207

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  ++   L  +  +++E +     + +Q+ + + +P ++  ++  +   +     
Sbjct: 208 -APPMARNVMLGLERVEPEIKEAAIMSGGTRFQQLFQVEIPAAVTQIMVGVNQCLMAALS 266

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML------------------- 246
            V+ + +I   +       IG  + L +++      L A +                   
Sbjct: 267 MVIIAAVIGGFND------IGWEVLLTMRKAQFGESLLAGMVIVVFAVVIDRMSGTLATE 320

Query: 247 ----------TMLGVIFLYDQLLFRPMI---------VWSNKFRLERTTGIYPADSWVLY 287
                      +LG   L+  L +  +            +       T        W+  
Sbjct: 321 RKRHDNRVVWAVLGFAVLFTLLFWARLPDPSGLTLLDPVAQAVDSGLTAFTQNNGPWLDS 380

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           L   + F   +        + L                      + L    R      + 
Sbjct: 381 LKNNSMFYVLLPLRIGLDQAVLPFTWGFQWTPAMSYGLFAAGAVIALLMAWRGHLTGGLV 440

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--------------------GCITM 387
              ++  +  GIA     +++        +   W                       +++
Sbjct: 441 TLILIGMLETGIANLPWPFVLTGVAALGWVAGGWRLAALSVALLSTILISGLWERALLSL 500

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +     +   +++   +G+       +   ++P   +L   P  VF   V+        +
Sbjct: 501 YLSGAAVFFCAVVGGLIGLASAVWSPVWRIVRPICDMLQTIPLFVFLIPVLMVFQIGEFS 560

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L +    I     Y       G    P++  E A S   T W+  R +  P   P  +
Sbjct: 561 AFLAICAYAIVPMIRY----TRHGLVNTPDEMMEAAISSGATEWQIMRDVRAPYAAPTIL 616

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            G       A+   +++ +         TTGLG  I  +  +      +     M  
Sbjct: 617 LGLNQTILYAFAMLVIAALIG-------TTGLGQSIYLALGQADVGLGISAGAAMAI 666



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 88/229 (38%), Gaps = 19/229 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +  +  +  +  G +   +   ++  + I+     L + A  +     +A+    +
Sbjct: 457 WPFVLTGVAALGWVAGGWRLAALSVALLSTILIS----GLWERALLSLYLSGAAVFFCAV 512

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    +A    +  ++ PI D++Q+IP+  FL   ++ F           E +A  A
Sbjct: 513 VGGLIGLASAVWSPVWRIVRPICDMLQTIPLFVFLIPVLMVFQIG--------EFSAFLA 564

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  M       L N P ++ E + S   + WQ    +  P++ P ++  +  ++ 
Sbjct: 565 ICAYAIVPMIRYTRHGLVNTPDEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTIL 624

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  +V + +I          G+G  I LA+ + D+   + A   M  
Sbjct: 625 YAFAMLVIAALI-------GTTGLGQSIYLALGQADVGLGISAGAAMAI 666



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 91/275 (33%), Gaps = 17/275 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
              +  ++F        +L   L      +    L       +  ++    + +      
Sbjct: 56  WVGAFLDWFLNAIKPAARLFSDLMAYPMDWANFVLGNTPWPILIGLVTALGWYLGGLPMA 115

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            + +  + +++    + +          T+  V V + +A I+   +GI     P + S 
Sbjct: 116 ALGFLGLSFVLASGYWAE-------SMNTLALVAVSVPVALIVGGAIGILANEVPRVKSA 168

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +Q    ++   P   +   ++    +  +   +  ++         +  NV+ G      
Sbjct: 169 VQAVLDIMQTVPTFAYLTPLLLLFGFGPVVGLIASAIY----AAPPMARNVMLGLERVEP 224

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           + KE A     T ++    + +P      + G       A +  I++ V    +      
Sbjct: 225 EIKEAAIMSGGTRFQQLFQVEIPAAVTQIMVGVNQCLMAALSMVIIAAVIGGFND----- 279

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +G  +  +  K  F E +L  +++  F + ++R 
Sbjct: 280 -IGWEVLLTMRKAQFGESLLAGMVIVVFAVVIDRM 313


>gi|86358687|ref|YP_470579.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86282789|gb|ABC91852.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 281

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 94/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI +I+ L   ++ +        +  + +      +  + T   +L++  +S++    
Sbjct: 54  LIVIAVISALAFWLRRSIAITLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+   +   + P+LD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 LGIAAARRAWVYAAMRPVLDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + +F     Q    + +PF+ P ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPSLVEAAVAFGARPMQVLRKVELPFAAPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     A L ++ +  + D++ 
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNTVNVAKGFEAGLCIVILAIILDRMF 272



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             V+  ++    W      +  FT   +L ++  G       T+  V+    ++ +I IP
Sbjct: 54  LIVIAVISALAFWLRRSIAITLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    R  + + ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 LGIAAARRAWVYAAMRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A +F     +  R + LP   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPSLVEAAVAFGARPMQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +  +     L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVVRALNTVNVAKGFEAGLCIVILAIILDRMF 272


>gi|84684479|ref|ZP_01012380.1| putative taurine transport system permease protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667458|gb|EAQ13927.1| putative taurine transport system permease protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 270

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   F             I++ R+ V +++ ++  + VG+ +G    +   + P    L 
Sbjct: 58  LATGFAQAQTAQFWGDLGISLQRIAVGLVMGAVPGVLVGLAMGLFRPVREALNPLIAALF 117

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++        +  + +++ + F     +  N  AG  + P  + EVA + 
Sbjct: 118 PIPKIALLPLLLLIFGIGETSKYVTIAINVFF----LMTINTFAGVVSTPKIYFEVARNL 173

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  + +  + LPG  P   TG     G A    +  E           +G+G  I  +
Sbjct: 174 KASRLKTYLTVALPGALPGIFTGLRICMGTALILLVAVEF------STADSGVGYRIWWA 227

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   + +G L++    L  +  +
Sbjct: 228 WTVFWVDTMYVGFLVIAILGLGFSYAV 254



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 101/272 (37%), Gaps = 21/272 (7%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHS 60
           +  P   +RR+      L++ ++++G+  I        +     P  I+           
Sbjct: 10  SRAPRKGTRRVLGMPIGLISPIVLLGLWEIAARTGAVNVTFFPAPSTILATGFAQAQTAQ 69

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                  +  R+   +V+  +   +        R +   L P++  +  IP +  L   +
Sbjct: 70  FWGDLGISLQRIAVGLVMGAVPGVLVGLAMGLFRPVREALNPLIAALFPIPKIALLPLLL 129

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F      K +   +   F         MT + +  + + P+   EV+R+ + S  + +
Sbjct: 130 LIFGIGETSKYVTIAINVFFL--------MTINTFAGVVSTPKIYFEVARNLKASRLKTY 181

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ--DL 238
             + +P ++PG+   + + M      +VA E            G+G  I  A      D 
Sbjct: 182 LTVALPGALPGIFTGLRICMGTALILLVAVEFSTADS------GVGYRIWWAWTVFWVDT 235

Query: 239 LAILYAMLTMLGVIFLY-DQLLFRPMIVWSNK 269
           + + + ++ +LG+ F Y    L R +I W  K
Sbjct: 236 MYVGFLVIAILGLGFSYAVDFLERLVIPWHRK 267


>gi|124265309|ref|YP_001019313.1| membrane protein [Methylibium petroleiphilum PM1]
 gi|124258084|gb|ABM93078.1| membrane protein [Methylibium petroleiphilum PM1]
          Length = 281

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 86/257 (33%), Gaps = 10/257 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                 L   R         L     V+ +        +  ++  I  +    +   +T 
Sbjct: 14  GAAPSRLAPRRTSGAALRRLLPWLLPVALLSGWQLASQLGWLSTRILPEPWAVLKAFWTL 73

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +      + +R    + I   + + +G+  G    + + +    Q++   P    
Sbjct: 74  AASGEMWQHVATSTWRAFAGLAIGGGLGLVLGLATGTFRTLETALDSTLQMVRNIPPLAM 133

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PLV+                L+ FG  + +  N   G  A      E+A S+ ++G+  
Sbjct: 134 IPLVILWFGI----DEGAKLFLVAFGVFFPVYLNTFHGIRAVDPALIEMARSYGLSGFAL 189

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R +ILPG  P  + G   A G  W   IV+E  S         G+G     + E     
Sbjct: 190 YRQVILPGALPNILVGLRFALGLMWVLLIVAETIS------AQAGIGYMTMNAREFLQTD 243

Query: 554 EVVLGVLIMCCFVLALN 570
            V++G+L+        +
Sbjct: 244 VVLVGILLYALLGKLAD 260



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +    + + L     +    P  ++           + Q+ + +T R  + + I   
Sbjct: 40  VALLSGWQLASQLGWLSTRILPEPWAVLKAFWTLAASGEMWQHVATSTWRAFAGLAIGGG 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V        R L   L   L ++++IP L  +   +++F           E A +F 
Sbjct: 100 LGLVLGLATGTFRTLETALDSTLQMVRNIPPLAMIPLVILWFGID--------EGAKLFL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + +  +  +   L E++RS+ LSG+  +  + +P ++P ++  +  ++ 
Sbjct: 152 VAFGVFFPVYLNTFHGIRAVDPALIEMARSYGLSGFALYRQVILPGALPNILVGLRFALG 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      +L  +L    +  L D   + 
Sbjct: 212 LMWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADLAAKA 265

Query: 259 LFRPMIVWSNKFR 271
           L R  + W   +R
Sbjct: 266 LERWWLRWHPGYR 278


>gi|239630305|ref|ZP_04673336.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301067455|ref|YP_003789478.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Lactobacillus casei str. Zhang]
 gi|239527917|gb|EEQ66918.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300439862|gb|ADK19628.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lactobacillus casei str. Zhang]
          Length = 271

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 17/248 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
                  +  +  +V   +           A+   W +   +    T       +W    
Sbjct: 10  RPKPRTKRHINWFKVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGE 69

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 I+++R      I   I   +G+  G    I + +    Q+L   P       ++
Sbjct: 70  LPKNIAISLYRATAGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPHLS----LI 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  + I  N   G +    +  E+  ++ ++    +  II
Sbjct: 126 PLLIILIGIGESAKISLVAIGVMFPIYINTYQGITTANPELLEMGHAYGLSKRDLFTRII 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            PG  P  + G   A G  W   IV+E  S       ++GLG     + E      V+L 
Sbjct: 186 FPGALPNILMGVRYALGVMWTTLIVAETIS------SSSGLGYMATNAQEFMRMDTVLLC 239

Query: 559 VLIMCCFV 566
           +LI     
Sbjct: 240 ILIYALLG 247



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 90/258 (34%), Gaps = 17/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P I  L         ++           P  ++           LP+  + +  R  
Sbjct: 23  KVLPWIVPLGLLAGWQAAVSFNWLTSSLLPAPLTVIQDGITLWQSGELPKNIAISLYRAT 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   I     FV   +    R +  +L   + ++++IP         +  + L    +  
Sbjct: 83  AGFAIGGSIGFVLGLMNGLVRPIRALLDSPIQMLRNIPH--------LSLIPLLIILIGI 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A I  +    ++ +  + YQ +     +L E+  ++ LS    F  +  P ++P ++
Sbjct: 135 GESAKISLVAIGVMFPIYINTYQGITTANPELLEMGHAYGLSKRDLFTRIIFPGALPNIL 194

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++   W  ++ +E I          G+G     A +   +  +L  +L    +  
Sbjct: 195 MGVRYALGVMWTTLIVAETISSSS------GLGYMATNAQEFMRMDTVLLCILIYALLGK 248

Query: 254 LYDQL---LFRPMIVWSN 268
           + D +   L R  + W  
Sbjct: 249 VSDLIAKSLERVFLSWRQ 266


>gi|254472399|ref|ZP_05085799.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062]
 gi|211958682|gb|EEA93882.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062]
          Length = 281

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
               + T   +LS+  I +L        +A   +    + P+LD+MQ+IP   +L   ++
Sbjct: 90  WDETTETLALILSSTFICMLIGIPVGVYSAHHPKFFSWVRPVLDLMQTIPTFVYLIPALI 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FA+  S            + + P+ L E   +F  + WQK +
Sbjct: 150 LFGL---GVVPGLISTVVFALPAS-----IRLTQIGVASTPKHLLEAGEAFGATYWQKLF 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++          G+G     A+   ++   
Sbjct: 202 KIELPYALPNIMAGLTQTIMLSLSMVVIAALV-------GADGLGVPTLRALNTVNIAKG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
               + ++ V  + D+  
Sbjct: 255 FEVGIAIVLVAIVLDRFF 272



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  ++    I  +I IPVG++    P   S ++P   L+   P  V+    +       
Sbjct: 96  TLALILSSTFICMLIGIPVGVYSAHHPKFFSWVRPVLDLMQTIPTFVYLIPALILFGLGV 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  +  +          G ++ P    E   +F  T W+    I LP   P 
Sbjct: 156 VPGLISTVVFALPASIRL----TQIGVASTPKHLLEAGEAFGATYWQKLFKIELPYALPN 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG     +    +  +     + +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------ADGLGVPTLRALNTVNIAKGFEVGIAIVLV 264

Query: 566 VLALNRFL 573
            + L+RF 
Sbjct: 265 AIVLDRFF 272


>gi|162453196|ref|YP_001615563.1| aliphatic sulfonate ABC transporter, membrane protein [Sorangium
           cellulosum 'So ce 56']
 gi|161163778|emb|CAN95083.1| aliphatic sulfonate ABC transporter, membrane protein [Sorangium
           cellulosum 'So ce 56']
          Length = 270

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---------- 383
                R   +    W   +  V +      +  I        V  ++             
Sbjct: 9   PGGAARGLGVRIAPWLAPLALVILWEVLSRLQIIPKSLLPSPVEVLVAASNATRSGDLPA 68

Query: 384 --CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              ++  R    +++ + + + +G+  G    +   I    Q+L A PA    PLV+   
Sbjct: 69  HLGVSALRAAGGLVVGAAVGLALGLGTGLSRPLQLVIDGPLQMLRAIPALALVPLVILWF 128

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                     +++ ++F     +  N   G  +      E+A  + + G+  +R +I PG
Sbjct: 129 GLGEAAKLFIVAITVLF----PVYLNTFHGVRSVDPQLIEMARVYDVRGFALYREVIFPG 184

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G   A G +W   IV+E          + GLG     + E      +VL +++
Sbjct: 185 ALPSILVGLRFALGLSWLVLIVAETLG------ASQGLGYVAMNAREFMQMDLLVLTIVL 238

Query: 562 MCCFVLALNRFLWHPLYLYGTRCL 585
                   +      L  +  R L
Sbjct: 239 WAILGKLAD-----SLARWLERRL 257



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 102/261 (39%), Gaps = 17/261 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +  RI P +  L   +L   +  + +        P +++           LP +   + L
Sbjct: 16  LGVRIAPWLAPLALVILWEVLSRLQIIPKSLLPSPVEVLVAASNATRSGDLPAHLGVSAL 75

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R    +V+              SR L +V+   L ++++IP L  +   +++F       
Sbjct: 76  RAAGGLVVGAAVGLALGLGTGLSRPLQLVIDGPLQMLRAIPALALVPLVILWFGLG---- 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +F +  + ++ +  + +  + ++   L E++R + + G+  +  +  P ++P
Sbjct: 132 ----EAAKLFIVAITVLFPVYLNTFHGVRSVDPQLIEMARVYDVRGFALYREVIFPGALP 187

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  ++   W  ++ +E +          G+G     A +   +  ++  ++    
Sbjct: 188 SILVGLRFALGLSWLVLIVAETLGASQ------GLGYVAMNAREFMQMDLLVLTIVLWAI 241

Query: 251 VIFLYDQL---LFRPMIVWSN 268
           +  L D L   L R ++ W  
Sbjct: 242 LGKLADSLARWLERRLLPWQP 262


>gi|255659680|ref|ZP_05405089.1| ABC transporter, permease protein [Mitsuokella multacida DSM 20544]
 gi|260848245|gb|EEX68252.1| ABC transporter, permease protein [Mitsuokella multacida DSM 20544]
          Length = 249

 Score =  100 bits (250), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 75/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      +++R+   + +A  +  P+G+ +G+       + P   L    P     P+++
Sbjct: 52  IFAHAAWSLWRIAAGLGLAVCVGYPLGVLMGYFRRADRYLSPVVYLTYPIPKIALLPILM 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  L+      L++     + ++  V       P +      S   +  + +R++I
Sbjct: 112 LLAGVGELSK----ILMIFLIIVFQVIVAVRDAIRTLPEERYAPLYSLGASFAQVFRFVI 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P ++T    A   A +    +E            G+G YI ++  + ++ E+  G
Sbjct: 168 LPASLPKFITAVRVAMATAVSVLFFTETFG------TQYGMGYYIMDAWLRVNYLEMYAG 221

Query: 559 VLIMCCFVLALNRFL 573
           +L++    L L   +
Sbjct: 222 ILVLSAMGLLLFGLI 236



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 80/196 (40%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A+ +  R+ + + +++   +    L    RR    L P++ +   IP +  L   ++  
Sbjct: 55  HAAWSLWRIAAGLGLAVCVGYPLGVLMGYFRRADRYLSPVVYLTYPIPKIALLPILMLLA 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      EL+ I  IF   V+ +  ++  ++  +P +      S   S  Q F ++
Sbjct: 115 GVG--------ELSKILMIFLIIVFQVIVAVRDAIRTLPEERYAPLYSLGASFAQVFRFV 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P  +  + ++M+       A  ++   +T     G+G YI  A    + L +  
Sbjct: 167 ILPASLPKFITAVRVAMA------TAVSVLFFTETFGTQYGMGYYIMDAWLRVNYLEMYA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            +L +  +  L   L+
Sbjct: 221 GILVLSAMGLLLFGLI 236


>gi|221198985|ref|ZP_03572030.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221205245|ref|ZP_03578261.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221175036|gb|EEE07467.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221181436|gb|EEE13838.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 292

 Score =  100 bits (250), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 95/240 (39%), Gaps = 12/240 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +AFVL+     +      +  VP     +      +    L      +   +L    + +
Sbjct: 48  IAFVLIAAWEIVARVVANDLLVPTFGATLAAFVDGIVSGELLVKTGISMSVLLRGYALGV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           LF FV  + A  +R    +L  +  +   +P +  L   +++F             + +F
Sbjct: 108 LFAFVLTSAAVSTRFGRDLLAMLTSMFNPLPSIALLPIALLWFGLGTG--------SLLF 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  + +W +  +MY     +P  L    R++ L+G ++   + VP ++P ++  + +  
Sbjct: 160 VLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPSILSGLRVGW 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 220 AFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 277



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 84/272 (30%), Gaps = 7/272 (2%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +       +                ++++L   W  V   VA  +   + G  +  F  
Sbjct: 22  ARDAERAAPLPLVRRVADAAWFRRAAIAFVLIAAWEIVARVVANDLLVPTFGATLAAFVD 81

Query: 374 QDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             V   ++    I+M  ++    +  +    +             +     +    P+  
Sbjct: 82  GIVSGELLVKTGISMSVLLRGYALGVLFAFVLTSAAVSTRFGRDLLAMLTSMFNPLPSIA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ +        +    L  +++    W +  N+  G    P   +    ++ +TG R
Sbjct: 142 LLPIALLWFGLGTGS----LLFVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLR 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I++P   P  ++G       AW   I +E+           GLG YI ++  +   
Sbjct: 198 QVLLILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELYT 255

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             V  G+  +    L +   ++  L     R 
Sbjct: 256 DRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 287


>gi|119952947|ref|YP_945156.1| glycine betaine transport system permease protein [Borrelia
           turicatae 91E135]
 gi|119861718|gb|AAX17486.1| glycine betaine transport system permease protein [Borrelia
           turicatae 91E135]
          Length = 299

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++  S+++  +   L     +  + L P+LD+MQ++P   +L   
Sbjct: 83  NLWEVSMDTISIIFVSVFFSVIWGILIGILGGYYSKFYVFLKPLLDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +P ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TSSAIFATIIFAMPPVIRYTRLGIIQVPGEVIEAAKSFGSSNIRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++  ++  +  S+      +V + M+          G+G  +  +++     
Sbjct: 195 LFQIQLPLALQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRSVIYSVERLHFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVVIAIILDRIMQAIFIKFS 275



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           +F+  ++C ++     + +  ++       + + +W   + T+  + V +  + I  I +
Sbjct: 50  VFFIILICVLSFLFLKKRLALLIMLGFCFILYFNLWEVSMDTISIIFVSVFFSVIWGILI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+       ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYYSKFYVFLKPLLDLMQAMPPFIYLIPAIPFFGMGTSSAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P +  E A SF  +  R    I LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIIQVPGEVIEAAKSFGSSNIRILFQIQLPLALQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+  F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRSVIYSVERLHFGEGLISGLAVVVIAIILDRIM 267


>gi|157164093|ref|YP_001467690.1| putative molybdenum ABC transporter, solute-binding protein
           [Campylobacter concisus 13826]
 gi|112800774|gb|EAT98118.1| binding-protein-dependent transport systems inner membrane
           component [Campylobacter concisus 13826]
          Length = 249

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 15/249 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R IF     +LA   +  ++  + +        P      +        L  +   +  R
Sbjct: 2   REIFKKSILILAIFAIWQVVCELEIFTPYILPSPIATFKTMYSMSLSGELATHTIISFKR 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   +S     V   +AA   ++ +    IL+  ++IP L  +   V++F      K+
Sbjct: 62  IFAGYALSFALALVLGGIAALLPKISVYYEWILEFFRNIPPLSLIAILVLWFGINETPKI 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   LA+ F         M  S+ + L +    L EV + F  S ++ F+ + +  ++  
Sbjct: 122 IIIILASFF--------PMFLSIQKGLTSCDTKLIEVGKIFGFSKFEIFYKIILKSALKD 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M +        ++ +EMI          G+G  I  A +      I   + T+   
Sbjct: 174 IFVGMRIGFGYAMRAIIGAEMIAASS------GLGYLILDAEELSRADRIFVGIFTIGIC 227

Query: 252 IFLYDQLLF 260
             L D++  
Sbjct: 228 GVLIDRIFL 236



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I    I      ++      +     I+  R+     ++  + + +G      P IS  
Sbjct: 30  YILPSPIATFKTMYSMSLSGELATHTIISFKRIFAGYALSFALALVLGGIAALLPKISVY 89

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +   +     P      ++V               +++I  + + +  ++  G ++   
Sbjct: 90  YEWILEFFRNIPPLSLIAILVLWFGI----NETPKIIIIILASFFPMFLSIQKGLTSCDT 145

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              EV   F  + +  +  IIL         G     G A  A I +E+ +       ++
Sbjct: 146 KLIEVGKIFGFSKFEIFYKIILKSALKDIFVGMRIGFGYAMRAIIGAEMIA------ASS 199

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  I ++ E      + +G+  +    + ++R  
Sbjct: 200 GLGYLILDAEELSRADRIFVGIFTIGICGVLIDRIF 235


>gi|317485030|ref|ZP_07943912.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316923565|gb|EFV44769.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 252

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              + +RV+  + +A ++  P+G+ +G    + + + P   L    P  V  PL ++   
Sbjct: 53  AGASAWRVLSAMSLAWLVAFPLGLILGHVRSVDNTLSPMVFLTYPLPKIVLLPLFLTLFG 112

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L       LL+   T + IL    A A      + +   S   T  +  R++++P  
Sbjct: 113 LGDL----PRVLLIALTTGYQILVVTRASAQGLDKKYLDSFRSLGGTPLQMLRHVLIPAA 168

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +T    A G A     ++E  +         GLG  I ++  +G   E+  G+L M
Sbjct: 169 LPDAMTALKVASGTAVAVLFMAESFA------TRRGLGFLIMDAWGRGDQLEMFTGILAM 222

Query: 563 CCFVLALNRF 572
               +AL   
Sbjct: 223 SLLGVALYEL 232



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 80/227 (35%), Gaps = 14/227 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I  L  G      P D++      L   +  Q+A  +  R+LSAM ++ L  F    +  
Sbjct: 20  IGSLALGEFLLPRPLDVLAYFGEALTTGAFWQHAGASAWRVLSAMSLAWLVAFPLGLILG 79

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
             R +   L P++ +   +P +  L   +  F           +L  +  I  +  + + 
Sbjct: 80  HVRSVDNTLSPMVFLTYPLPKIVLLPLFLTLFGLG--------DLPRVLLIALTTGYQIL 131

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
                S   + +   +  RS   +  Q   ++ +P ++P  +  + ++       +  +E
Sbjct: 132 VVTRASAQGLDKKYLDSFRSLGGTPLQMLRHVLIPAALPDAMTALKVASGTAVAVLFMAE 191

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                       G+G  I  A    D L +   +L M  +     +L
Sbjct: 192 SFA------TRRGLGFLIMDAWGRGDQLEMFTGILAMSLLGVALYEL 232


>gi|326940556|gb|AEA16452.1| glycine betaine transport system permease protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 278

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +             M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLIIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  LSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|107028306|ref|YP_625401.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686300|ref|YP_839547.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105897470|gb|ABF80428.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652015|gb|ABK12654.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 324

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      +   ++++PG+ P 
Sbjct: 191 APK----IAIIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 300

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 301 GLGTDIVLGLLGRRLFPW 318



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +    VIS         +      L  +  P L+
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTLFQQVLIIANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 275 TWYISQQARYQHFDNVYAAILMIGIIGLGTDIVLGLLGRRLFPW 318


>gi|325289170|ref|YP_004265351.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964571|gb|ADY55350.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 267

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 10/181 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  ++A++  IP GI +G+         P        P     PL +        +   
Sbjct: 80  AIGYLMAAVTGIPAGIALGWFKKAGLAFGPMIAAFYTTPRIALMPLFIIWFGLGVGSK-- 137

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+     + ++ N+    S    DF  VA ++     + +  I LP   P+ +TG 
Sbjct: 138 --LALVFLSAVFPLIVNMQTAVSNLDKDFTTVAKAYGANQRQIFFTIALPESVPFLITGL 195

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A G A    + +EV           GLG  I  +       +V + V+I+    + ++
Sbjct: 196 RLATGRALLGVVGAEVFGG------AEGLGYLIQYAGATFQVDKVFVCVVIIAAAGIIMD 249

Query: 571 R 571
           R
Sbjct: 250 R 250



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 96/252 (38%), Gaps = 19/252 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L  ++   + + L L      + P  I   +        +  +   ++       +++ 
Sbjct: 28  ILVLLITWEVSSALNLVNPMFASSPARIFTALIKLFKNGEIIPHIVESSKVFAIGYLMAA 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +            ++ G+   P++    + P +  +   +++F      K+         
Sbjct: 88  VTGIPAGIALGWFKKAGLAFGPMIAAFYTTPRIALMPLFIIWFGLGVGSKLA-------- 139

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F S V+ +  +M  ++ N+ +D   V++++  +  Q F+ + +P S+P L+  + ++ 
Sbjct: 140 LVFLSAVFPLIVNMQTAVSNLDKDFTTVAKAYGANQRQIFFTIALPESVPFLITGLRLAT 199

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                 VV +E+    +      G+G  I  A     +  +   ++ +     + D    
Sbjct: 200 GRALLGVVGAEVFGGAE------GLGYLIQYAGATFQVDKVFVCVVIIAAAGIIMD---- 249

Query: 261 RPMIVWSNKFRL 272
           R ++  + +F L
Sbjct: 250 RSLLALNKRFSL 261


>gi|300790340|ref|YP_003770631.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299799854|gb|ADJ50229.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 256

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 13/207 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            I     TM   ++ I +A  + +P G+ +G  P + +      + L   P     PLV+
Sbjct: 51  FIRDIVATMLAWLIAIAVAIAVGVPAGLLLGSVPALRTATAAIVEFLRPIPITALVPLVL 110

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L ++ + W I+FN I G         E A +   + +R    + 
Sbjct: 111 LVIGSGP----EAKITLAVYASLWPIMFNTIYGMGEIDPVLMETARACGTSRFRILTSVA 166

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES-TEKGSFPEVVL 557
           LP   P+  TG   +   +  A +  E  +   +     GLG++I  + T    F  V+ 
Sbjct: 167 LPQTAPFVFTGVRLSATISLIAVVSVEFLAGSQL-----GLGSFIIVASTGSARFDLVLA 221

Query: 558 GVLIMCCFVLALNRF---LWHPLYLYG 581
           G ++       +N     L   L+ + 
Sbjct: 222 GTVVAGALGYLINEGLEQLGKRLFRWS 248



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 97/260 (37%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++   +  L+ F+L+  ++  +    +  T  P  ++  V   L      +    T L 
Sbjct: 2   KKLLRGLAGLVGFLLLWEVLVQVGLVDRTFTPPPSVVLGTVGDLLGDPDFIRDIVATMLA 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A+ +++        L      L      I++ ++ IPI   +   ++   +      
Sbjct: 62  WLIAIAVAIAVGVPAGLLLGSVPALRTATAAIVEFLRPIPITALVPLVLLVIGSG----- 116

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                A I     + +W + F+    +  I   L E +R+   S ++    + +P + P 
Sbjct: 117 ---PEAKITLAVYASLWPIMFNTIYGMGEIDPVLMETARACGTSRFRILTSVALPQTAPF 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA-IKEQDLLAILYAMLTMLG 250
           +   + +S +     VV+ E +          G+GS+I +A         +L   +    
Sbjct: 174 VFTGVRLSATISLIAVVSVEFLAGSQL-----GLGSFIIVASTGSARFDLVLAGTVVAGA 228

Query: 251 VIFLYDQL---LFRPMIVWS 267
           + +L ++    L + +  WS
Sbjct: 229 LGYLINEGLEQLGKRLFRWS 248


>gi|11497706|ref|NP_068927.1| nitrate ABC transporter, permease protein (nrtB-1) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2650562|gb|AAB91143.1| nitrate ABC transporter, permease protein (nrtB-1) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 244

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 21/234 (8%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL----------GCITMFRVVVLIIIASI 399
            ++   ++ + W +  Y++ +    + L V+ L            +++ RVV  + +A  
Sbjct: 11  YLITLASLLLIWAAASYLLQNPALPNPLDVLALILTRKELITHTAVSLIRVVYSLALALS 70

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P GI       + + I P   LL   P  V  PL +       L+      LL+   
Sbjct: 71  VALPAGIL-SRERVVDATISPIIYLLYPIPHIVLLPLYILLFGIGDLS----RVLLIATI 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + I       A    + +     S   +    +R++I+P + P  +T    + G A  
Sbjct: 126 LFFQIAVTTRDAAKQVSDYYVYSILSLGASKIDIYRHVIIPAVMPKILTALRISIGTAIA 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +E  +       T+GLG  I +S  +  +  +   +  M     AL   +
Sbjct: 186 VLFFAESFA------TTSGLGYLIIDSWSRADYTTMYAAITTMALLGFALYVIV 233



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 89/237 (37%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +  + +I      + +     + +D++ + L    L  + + + +R++ ++ ++L  
Sbjct: 12  LITLASLLLIWAAASYLLQNPALPNPLDVLALILTRKELITHTAVSLIRVVYSLALALSV 71

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L ++ R +   + PI+ ++  IP +  L   ++ F           +L+ +  I
Sbjct: 72  ALPAGIL-SRERVVDATISPIIYLLYPIPHIVLLPLYILLFGIG--------DLSRVLLI 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T   + +  +   +   +         S   S    + ++ +P  MP ++  + +S+  
Sbjct: 123 ATILFFQIAVTTRDAAKQVSDYYVYSILSLGASKIDIYRHVIIPAVMPKILTALRISIGT 182

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               +  +E            G+G  I  +    D   +  A+ TM  + F    ++
Sbjct: 183 AIAVLFFAESFA------TTSGLGYLIIDSWSRADYTTMYAAITTMALLGFALYVIV 233


>gi|218529324|ref|YP_002420140.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218521627|gb|ACK82212.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 332

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     +D   +      ++  +    +I + +   +G+ IG+   +     P  + +  
Sbjct: 120 ILEVFLEDWPRLGGSILASLKLLAGGYLIGAALGFVLGVAIGWSKAVGYWAHPILRFVGP 179

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P+          +     + L+   T + +     +G +     + +VA +  
Sbjct: 180 LPATAWLPMAFFVFP----SSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLG 235

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GGA+   +V+E+          +GLG Y+  + 
Sbjct: 236 ASPAFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLG------VKSGLGWYLQWAQ 289

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++  +   +++M      L   L+ 
Sbjct: 290 GWAAYANMYAALIVMALMCSGLITLLFR 317



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +   +    +I     FV       S+ +G    PIL  +  +P   +L
Sbjct: 127 DWPRLGGSILASLKLLAGGYLIGAALGFVLGVAIGWSKAVGYWAHPILRFVGPLPATAWL 186

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 187 PMAFFVF--------PSSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLGASP 238

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 239 AFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLGVKS------GLGWYLQWAQGWA 292

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A++ M  +      LLFR
Sbjct: 293 AYANMYAALIVMALMCSGLITLLFR 317


>gi|323159564|gb|EFZ45544.1| putative aliphatic sulfonates transport permease protein ssuC
           [Escherichia coli E128010]
          Length = 263

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             F  +  V V  + + +     +    P  +V           L Q+ + ++   L   
Sbjct: 14  PWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWWALIGF 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I      +   ++  SR    +L   + +++++P L  +   +++F           E 
Sbjct: 74  SIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A IF +    ++ +  + +  + NI R L E++RS+ LSG   F ++ +P ++P ++  +
Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGV 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++   W  ++ +E I          GIG     A +      ++ A++    +  L D
Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 257 ---QLLFRPMIVWSNKFRLERTT 276
              QLL R  + W+  + L+  T
Sbjct: 240 VSAQLLERLWLRWNPAYHLKEAT 262



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 78/235 (33%), Gaps = 22/235 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           WF  V  VA+     S+G++           V     ++    +   +  S  W  +G  
Sbjct: 15  WFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWWALIGFS 74

Query: 408 IGFR------------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IG                    +    Q+L   P     PLV+                L
Sbjct: 75  IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESAKIFL 130

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  GT + I  N   G         E+A S+ ++G   + ++ILPG  P  + G   A G
Sbjct: 131 VALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALG 190

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             W   IV+E  S        +G+G     + E      VV+ +++        +
Sbjct: 191 LMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239


>gi|199597817|ref|ZP_03211243.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus rhamnosus
           HN001]
 gi|199591253|gb|EDY99333.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus rhamnosus
           HN001]
          Length = 510

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L A++++++     A       ++  VL+ I  ++Q+IP L  L  
Sbjct: 13  GELLSALGQHIEISLIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+    +  +  + Y  L +I    EE + +F +S  +
Sbjct: 73  LIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFGMSRLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGIDRNDA 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L   L    +  ++  LL
Sbjct: 178 ALTLMGALAAALLAIVFSWLL 198



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+A +I IP+ +W+     +++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|296133748|ref|YP_003640995.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296032326|gb|ADG83094.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 233

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 80/200 (40%), Gaps = 10/200 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             +    +++ RV+    I+ +I + +G+ +    ++   + P    L   P+  + PL 
Sbjct: 31  SFLIAIAVSLKRVITGYFISLVIGLTLGLTVVRVRYLDENLSPLLLGLQTLPSICWLPLA 90

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +    +  ++  G+ + I    ++G    P  +  VA +    G + +  +
Sbjct: 91  ILWFGIGEDS----IIFVIAIGSIFSISMAAVSGIKNVPPLYMRVAKTMGAKGLKAYTTV 146

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++G       AW A +  E+ S         GLG  +    +     +VV 
Sbjct: 147 VIPAALPSIISGMKQGWSFAWRALMAGEMLS------PKDGLGYALTVGRDLADMNQVVS 200

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            ++I+    L +++ ++  L
Sbjct: 201 VMIIIIVLGLVIDKLIFGRL 220



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 95/221 (42%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++  +       S     + +  R+++   ISL+          + R L   L P
Sbjct: 14  PSPVGVMSNLWAGFRDTSFLIAIAVSLKRVITGYFISLVIGLTLGLTVVRVRYLDENLSP 73

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L  +Q++P + +L   +++F           E + IF I    +++++ +    + N+P
Sbjct: 74  LLLGLQTLPSICWLPLAILWFGIG--------EDSIIFVIAIGSIFSISMAAVSGIKNVP 125

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                V+++    G + +  + +P ++P ++  M    S  W  ++A EM+   D     
Sbjct: 126 PLYMRVAKTMGAKGLKAYTTVVIPAALPSIISGMKQGWSFAWRALMAGEMLSPKD----- 180

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+ ++ +  + D+L+F  +
Sbjct: 181 -GLGYALTVGRDLADMNQVVSVMIIIIVLGLVIDKLIFGRL 220


>gi|256061630|ref|ZP_05451769.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella neotomae 5K33]
 gi|261325637|ref|ZP_05964834.1| glycine betaine/L-proline ABC transporter permease [Brucella
           neotomae 5K33]
 gi|261301617|gb|EEY05114.1| glycine betaine/L-proline ABC transporter permease [Brucella
           neotomae 5K33]
          Length = 278

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++  G       G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALVGAG-------GLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +   G       GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVGAG-------GLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|217960227|ref|YP_002338787.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH187]
 gi|217064216|gb|ACJ78466.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH187]
          Length = 278

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +             M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLIIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|30262757|ref|NP_845134.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47528078|ref|YP_019427.1| glycine betaine/L-proline ABC transporter permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185603|ref|YP_028855.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           anthracis str. Sterne]
 gi|52142725|ref|YP_084104.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus E33L]
 gi|65320082|ref|ZP_00393041.1| COG4176: ABC-type proline/glycine betaine transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165868422|ref|ZP_02213082.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167637784|ref|ZP_02396063.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170685429|ref|ZP_02876653.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|170704600|ref|ZP_02895066.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|177649738|ref|ZP_02932740.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190565236|ref|ZP_03018156.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196043421|ref|ZP_03110659.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|218903908|ref|YP_002451742.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|225864762|ref|YP_002750140.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|227814403|ref|YP_002814412.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229601264|ref|YP_002867064.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|254685349|ref|ZP_05149209.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722757|ref|ZP_05184545.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. A1055]
 gi|254737805|ref|ZP_05195508.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Western North America USA6153]
 gi|254752119|ref|ZP_05204156.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Vollum]
 gi|254760640|ref|ZP_05212664.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           anthracis str. Australia 94]
 gi|300118748|ref|ZP_07056474.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus SJ1]
 gi|301054307|ref|YP_003792518.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           anthracis CI]
 gi|30257389|gb|AAP26620.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47503226|gb|AAT31902.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179530|gb|AAT54906.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. Sterne]
 gi|51976194|gb|AAU17744.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus E33L]
 gi|164715148|gb|EDR20665.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167514333|gb|EDR89700.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170130401|gb|EDS99262.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|170670789|gb|EDT21528.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|172084812|gb|EDT69870.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190563263|gb|EDV17228.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196025730|gb|EDX64399.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|218538402|gb|ACK90800.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|225786094|gb|ACO26311.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|227004898|gb|ACP14641.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229265672|gb|ACQ47309.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|298723905|gb|EFI64621.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus SJ1]
 gi|300376476|gb|ADK05380.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus biovar anthracis str. CI]
          Length = 278

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +             M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLIIIPAILMIILLCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|329114191|ref|ZP_08242953.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696267|gb|EGE47946.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 260

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 16/198 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    +    L  ++I  +       L   +  +  +L  I+ +++ +P L ++ F +++
Sbjct: 66  QAILDSLHHYLLGLLIGSVLGAGLGILCGMAAVVDGLLEGIVRLLRPVPGLAWVPFAILW 125

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFW 181
           F     G        A F I  S  W   ++ + ++  +  +L E++ +F   S   + +
Sbjct: 126 FGLNTSG--------ATFVIAISVFWINFYAAHSAVRGVDPELYELAAAFGHGSFLGRLF 177

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + PGL+  +   +  GW  VVA+E+  V       PGIG+ +  A        +
Sbjct: 178 KVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-------PGIGARMMQASSLLATDVV 230

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  MLTM  +  + D L 
Sbjct: 231 VVYMLTMALLYAVTDFLF 248



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 75/209 (35%), Gaps = 14/209 (6%)

Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +      +V    W   I  ++   ++ ++I S++   +GI  G    +   ++   +LL
Sbjct: 51  LGPAWLDEVRGGFWQQAILDSLHHYLLGLLIGSVLGAGLGILCGMAAVVDGLLEGIVRLL 110

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P  +              + ++     W   +   +       +  E+A++
Sbjct: 111 RPVPGLAWVPFAILWFGL----NTSGATFVIAISVFWINFYAAHSAVRGVDPELYELAAA 166

Query: 486 FH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           F   +       ++LP   P  ++G  T  G  W + + +E+           G+GA + 
Sbjct: 167 FGHGSFLGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFG-------VPGIGARMM 219

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +++   +   VV+ +L M       +   
Sbjct: 220 QASSLLATDVVVVYMLTMALLYAVTDFLF 248


>gi|168180293|ref|ZP_02614957.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           NCTC 2916]
 gi|182668717|gb|EDT80695.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           NCTC 2916]
          Length = 527

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 76/190 (40%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L +++I++        +  K+++L   ++   ++ Q+IP L  L F +           
Sbjct: 26  TLISVLIAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 81  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    I   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 191 ALVIDWVTGR 200



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 11/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    +   ++ ++IA  I +P+GI I     ++  +  FA L  A P+      +
Sbjct: 14  QILSLLVAHIELTLISVLIAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +       +     +++  +   IL N   G +    D  E A    +T  +  + I
Sbjct: 74  IPLIGIG----SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLI 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   A   A     ++     G       GLG  +    +      ++ 
Sbjct: 130 KIPLAMPIIMAGIRIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILF 182

Query: 558 GVLIMCCFVLALN 570
           G +      L ++
Sbjct: 183 GAIPAAILALVID 195


>gi|220919715|ref|YP_002495018.1| choline ABC transporter, permease protein [Methylobacterium
           nodulans ORS 2060]
 gi|219952135|gb|ACL62526.1| choline ABC transporter, permease protein [Methylobacterium
           nodulans ORS 2060]
          Length = 285

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 94/245 (38%), Gaps = 18/245 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMV 77
           D L  V  + +I +   G         +   +  +L + +   Y      T   ++ +  
Sbjct: 47  DTLLAVPPLAMIGLFAAGAYLLHRSLGLALFIVTSLLLVANLGYWQATIETLSLVIWSTA 106

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++       LAA        + P+LD+MQ+IP   +L  T+V F     G V G    
Sbjct: 107 ACVVVGVPVGILAAHRPMFYAAIRPLLDLMQTIPTFVYLIPTLVLFGL---GMVPGIIST 163

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA+               + ++P  L E + ++  +  Q  + + +P +MP ++  + 
Sbjct: 164 VIFALPAP-----IRLTQLGISSVPESLREAALAYGATRTQMLFKVELPSAMPTILAGVT 218

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             +      VV + ++          G+G  +  A+   ++     A L ++ +  + D+
Sbjct: 219 QCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVNIAMGFEAGLAIVVLAIILDR 271

Query: 258 LLFRP 262
           +  RP
Sbjct: 272 VCKRP 276



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 11/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +          +  +     +IV        L        T+  V+       ++ +P
Sbjct: 55  LAMIGLFAAGAYLLHRSLGLALFIVTSLLLVANLGYWQATIETLSLVIWSTAACVVVGVP 114

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VGI    RP   + I+P   L+   P  V+    +  +  + L     +   +IF     
Sbjct: 115 VGILAAHRPMFYAAIRPLLDLMQTIPTFVYL---IPTLVLFGLGMVPGIISTVIFALPAP 171

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S+ P   +E A ++  T  +    + LP   P  + G       + +  ++
Sbjct: 172 IRL-TQLGISSVPESLREAALAYGATRTQMLFKVELPSAMPTILAGVTQCIMLSLSMVVI 230

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG  +  +    +        L +    + L+R    P
Sbjct: 231 AALVG-------ADGLGKPVVRALNTVNIAMGFEAGLAIVVLAIILDRVCKRP 276


>gi|322368074|ref|ZP_08042643.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320552090|gb|EFW93735.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 280

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 12/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++   +     T   +V  ++I + +   VG+ +G+   I + + P  ++L   P   + 
Sbjct: 80  ELPRALTRLAQTSLHLVPGLVIGAFVGNAVGLLVGYSRRIDATVTPAIRVLRPIPELAWI 139

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRW 493
              +      H       + ++  G  W   +   +G     + +KEVA+S  +      
Sbjct: 140 AFAIVWFGIGHAG----AAFIVAIGALWINYYGAYSGVHGVRDGYKEVATSLGVRTHLGM 195

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+++LP   P  V G  T+ G      + +E+           G+G  I  ++      
Sbjct: 196 LRHVVLPAASPSMVNGFRTSIGRCLMIVVGAELFG-------APGVGYEIINASNNLDMA 248

Query: 554 EVVLGVLIMCCFVLALN 570
             +  +L++    + ++
Sbjct: 249 RSMAYMLLISAVYICVD 265



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 31/259 (11%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------------VHSL 61
           R       +  F+ V   +  L+H       P  ++  +                    L
Sbjct: 22  RTVAGTLGIACFLGVWSALATLVHPEYLLPGPLPVLSALGAEFTTSAPFVLPVVGVPVEL 81

Query: 62  PQYASR---TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           P+  +R   T+L ++  +VI          L   SRR+   + P + +++ IP L ++ F
Sbjct: 82  PRALTRLAQTSLHLVPGLVIGAFVGNAVGLLVGYSRRIDATVTPAIRVLRPIPELAWIAF 141

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGW 177
            +V+F   + G        A F +    +W   +  Y  +  +    +EV+ S  + +  
Sbjct: 142 AIVWFGIGHAG--------AAFIVAIGALWINYYGAYSGVHGVRDGYKEVATSLGVRTHL 193

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               ++ +P + P +V     S+           MIVVG  +   PG+G  I  A    D
Sbjct: 194 GMLRHVVLPAASPSMVNGFRTSIGR-------CLMIVVGAELFGAPGVGYEIINASNNLD 246

Query: 238 LLAILYAMLTMLGVIFLYD 256
           +   +  ML +  V    D
Sbjct: 247 MARSMAYMLLISAVYICVD 265


>gi|89072348|ref|ZP_01158927.1| putative permease [Photobacterium sp. SKA34]
 gi|90577309|ref|ZP_01233120.1| putative permease [Vibrio angustum S14]
 gi|89051880|gb|EAR57332.1| putative permease [Photobacterium sp. SKA34]
 gi|90440395|gb|EAS65575.1| putative permease [Vibrio angustum S14]
          Length = 297

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI ++  +      +      V +    + V  +     RT   +L + ++++      
Sbjct: 65  IVIAVLAAIAFVASRSWKLSLGVVLSFGFIGVFGMWDNTMRTMSIILVSTMVAIGIGIPI 124

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
               A+S ++  V+ P+LD+MQ++P   +L   V+         +I        A+    
Sbjct: 125 GIAMARSEKVQRVVTPLLDVMQTMPAFVYLIPVVMLLGLGKIPGLI--------AVVIYS 176

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +       +  +  ++ E + ++  S  Q+ + + +P +MP ++  +  ++      
Sbjct: 177 VPPVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAM 236

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI V        G+G  +  +I  Q     L   L ++ +  ++D++
Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 14/229 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +    +             +W+    +V  F +  V  +      TM  ++V  ++A  
Sbjct: 60  ATPWWIVIAVLAAIAFVASRSWKLSLGVVLSFGFIGVFGMWDNTMRTMSIILVSTMVAIG 119

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GI +     +   + P   ++   PA V+   VV  +        +   + ++  
Sbjct: 120 IGIPIGIAMARSEKVQRVVTPLLDVMQTMPAFVYLIPVVMLLGLG----KIPGLIAVVIY 175

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   ++     G      +  E A+++  +  +    + +P   P  + G       A  
Sbjct: 176 SVPPVIRLTNLGIRLVDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALA 235

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCF 565
             +++ +           GLG  + +S     F   +L    ++ +   
Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAII 277


>gi|116618254|ref|YP_818625.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097101|gb|ABJ62252.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 258

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 10/203 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  I    T      +     I+++R    +++   +    G   G             Q
Sbjct: 46  VAVISKCITLIQSGELQRNMSISLYRATSGLLLGGTLGFVFGSVNGVSLFAQRFFNSSIQ 105

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++   P     PLV+  +             L+  G  + I  N   G  +      E+ 
Sbjct: 106 MIRNIPHLALIPLVIIWLGIG----ESAKISLVAVGVFFPIYINTFHGIRSIDKSLIEMG 161

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           SS+ ++  +    II+PG  P  + G   A G  W   IVSE  S       ++G+G   
Sbjct: 162 SSYGLSKKQMLMKIIIPGALPSILMGFRYALGVMWTTLIVSETIS------SSSGIGYME 215

Query: 544 AESTEKGSFPEVVLGVLIMCCFV 566
             + +    P + L +LI     
Sbjct: 216 INAQQFLDMPTIFLSILIYAFLG 238



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 89/237 (37%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A ++   +   + L        P  ++      +    L +  S +  R  S +++   
Sbjct: 22  IAILVTWQVTTSINLIDESLLPTPVAVISKCITLIQSGELQRNMSISLYRATSGLLLGGT 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV+ ++   S          + ++++IP L  +   +++            E A I  
Sbjct: 82  LGFVFGSVNGVSLFAQRFFNSSIQMIRNIPHLALIPLVIIWLGIG--------ESAKISL 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  + +  + +I + L E+  S+ LS  Q    + +P ++P ++     ++ 
Sbjct: 134 VAVGVFFPIYINTFHGIRSIDKSLIEMGSSYGLSKKQMLMKIIIPGALPSILMGFRYALG 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W  ++ SE I          GIG     A +  D+  I  ++L    +  + D +
Sbjct: 194 VMWTTLIVSETISSSS------GIGYMEINAQQFLDMPTIFLSILIYAFLGKVSDWI 244


>gi|325122236|gb|ADY81759.1| sulfate ester transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 279

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   IA+I  I  GI  G      +       +    P  V  P+ +       
Sbjct: 85  SLSRLFLGFSIAAISAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIGE 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L    +  LL+I    + I           P  + E+   + +    W R IILP I P 
Sbjct: 145 L----FKILLIIKACFFPIALAAADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPP 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G AW   +  E+ S G      TG+G  +    +      V++GV I    
Sbjct: 201 LIGGLRIALGRAWLILVAVELLSAG------TGIGQMMELGRQMLRLDVVMVGVFITGVV 254

Query: 566 VLALNRFL 573
              L++ L
Sbjct: 255 GFGLDKVL 262



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   +   I ++ +   Q    P+ + +     L    L  +   +  R+     I+ +
Sbjct: 39  LLVLFIWHLISSLQIFPTQILVPPKTVWNTFIALLQSGELQMHLKDSLSRLFLGFSIAAI 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +      +         + ++   IPI   +   ++ F           EL  I  
Sbjct: 99  SAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIG--------ELFKILL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  +   ++ NIP+   E+ + ++L        + +P  +P L+  + +++ 
Sbjct: 151 IIKACFFPIALAAADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIALG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +VA E++  G       GIG  + L  +   L  ++  +     V F  D++L
Sbjct: 211 RAWLILVAVELLSAGT------GIGQMMELGRQMLRLDVVMVGVFITGVVGFGLDKVL 262


>gi|170700313|ref|ZP_02891326.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170134800|gb|EDT03115.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 295

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 93/238 (39%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +    I+  ++            +      +    L      +   +L    + ++F
Sbjct: 53  LVLIAAWEIVARIVANDLLVPTVGATLAAFVQGIASGELLVKTGISMSVLLRGYALGVVF 112

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            FV  +LA  +R    VL  +  +   +P +  L   +++F             + +F +
Sbjct: 113 AFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWFGLGTG--------SLLFVL 164

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  SMY     +P  L+   R++ L+G ++   + VP ++P ++  + +  + 
Sbjct: 165 VHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPSILSGLRVGWAF 224

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 225 AWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 280



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 87/277 (31%), Gaps = 9/277 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
             +                  +   + +RV  + +L   W  V   VA  +   ++G  +
Sbjct: 20  RTLDTPPDAERAAPAPLVRRIVGASAFRRVVVALVLIAAWEIVARIVANDLLVPTVGATL 79

Query: 369 NHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
             F        ++    I+M  ++    +  +    +             +     +   
Sbjct: 80  AAFVQGIASGELLVKTGISMSVLLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNP 139

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    P+ +        +    L  +++    W +  ++  G +  P   K    ++ 
Sbjct: 140 LPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYG 195

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++ 
Sbjct: 196 LTGARQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNR 253

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +     V  G+  +    L +   ++  L     R 
Sbjct: 254 NELYTDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 290


>gi|203284070|ref|YP_002221810.1| glycine betaine/L-proline transport system permease protein
           [Borrelia duttonii Ly]
 gi|201083513|gb|ACH93104.1| glycine betaine/L-proline transport system permease protein
           [Borrelia duttonii Ly]
          Length = 299

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 86/207 (41%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + +  T   +  ++  S+L+  +   L     +  + L P LD+MQ++P   +L   +
Sbjct: 84  LWEVSMDTISLIFVSVFFSVLWGILIGILGGYCAKFYVFLKPFLDLMQAMPPFVYLIPAI 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F             +AIFA     +  +       +  +P ++ E ++SF  S  +  
Sbjct: 144 SFFDTG--------TSSAIFATIIFAMPPVIRYTRLGIIQVPSEVIEAAKSFGSSSARIL 195

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++  ++  +  S+      +V + M+          G+G  +  +++      
Sbjct: 196 FQIQLPLALQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSVERLHFAE 248

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L + L ++ +  + D+++    I +S
Sbjct: 249 GLISGLAVVIIAIILDRIMQAIFIKFS 275



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 13/238 (5%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLII 395
           +R+  +++   F V+  V   +  +    ++    +  +LY         T+  + V + 
Sbjct: 41  KRLFTVINPVLFIVIICVFSFLFLKKRLALLIMLGFCFILYFDLWEVSMDTISLIFVSVF 100

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            + +  I +GI  G+       ++PF  L+ A P  V+    +S       +      + 
Sbjct: 101 FSVLWGILIGILGGYCAKFYVFLKPFLDLMQAMPPFVYLIPAISFFDTGTSSAIFATIIF 160

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                   ++     G    P++  E A SF  +  R    I LP      + G   +  
Sbjct: 161 ----AMPPVIRYTRLGIIQVPSEVIEAAKSFGSSSARILFQIQLPLALQSIIEGINQSIM 216

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            A +  +++ +         ++GLG  +  S E+  F E ++  L +    + L+R +
Sbjct: 217 MAISMIVIAAMVG-------SSGLGRTVIYSVERLHFAEGLISGLAVVIIAIILDRIM 267


>gi|239917512|ref|YP_002957070.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|281413998|ref|ZP_06245740.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|239838719|gb|ACS30516.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Micrococcus luteus NCTC 2665]
          Length = 307

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 10/252 (3%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           SR + P    +L   +      +     +  T P D++           + Q  + +  R
Sbjct: 50  SRVLLPVAAVVLLVAIWQAFAWLAGARGEPITGPGDVLGAFGTLWAQGLVQQAVATSVGR 109

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    ++++       L  +   L     P+L  +  +P + ++   V++F        
Sbjct: 110 AVVGFALAVVVGVGLGLLLGQVGVLRRAFGPLLTALMVLPNVAWVPLAVLWFGL------ 163

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             ++  A F + T  V  +   +      +P  L   +R    S  +    + +P ++P 
Sbjct: 164 --SDATAYFVMLTGAVPAVVAGLTTGTDQVPPQLRRAARVLGASRLETALLVVLPAALPA 221

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I VG  +    G+G+ +     E DL  +L A+L +L V
Sbjct: 222 FVSGLRQGWAFAWRGLMAAEIIAVGGPMGV--GLGTLLHQGRTESDLAVVLCAVLAILAV 279

Query: 252 IFLYDQLLFRPM 263
             L +  +F P+
Sbjct: 280 GVLVELTVFGPV 291



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 16/289 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +        +   + +++L   L  ++         L        +L +    ++  +  
Sbjct: 8   LDAPGRAPGAATDDELRELDSGLDALQAVDSTRRTGLAGWDWSRVLLPVAAVVLLVAIWQ 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIW----------LGCITMFRVVVLIIIASIIWIPVGIW 407
             AW +           DVL                  ++ R VV   +A ++ + +G+ 
Sbjct: 68  AFAWLAGARGEPITGPGDVLGAFGTLWAQGLVQQAVATSVGRAVVGFALAVVVGVGLGLL 127

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    +     P    L   P   + PL V                +M+ G    ++  
Sbjct: 128 LGQVGVLRRAFGPLLTALMVLPNVAWVPLAVLWFGLSDAT----AYFVMLTGAVPAVVAG 183

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G    P   +  A     +       ++LP   P +V+G       AW   + +E+ 
Sbjct: 184 LTTGTDQVPPQLRRAARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEII 243

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + G       GLG  + +   +     V+  VL +    + +   ++ P
Sbjct: 244 AVGGPMGV--GLGTLLHQGRTESDLAVVLCAVLAILAVGVLVELTVFGP 290


>gi|294650420|ref|ZP_06727782.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292823691|gb|EFF82532.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 314

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 122 SIKLVFTAFFISSLIGIPLGILCGFSKTISQLTEPFVEFFRYLPAPAFGALAVAILGI-- 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     ++I GT +  +  +            E   +      +   ++++P   P 
Sbjct: 180 --NDAPKIAIIIIGTLFQQILIIANTTRLVDRSLIEAGFTLGTNKTKSLFHVVIPAALPE 237

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         T+G+  +I +     +F  V   +LI+   
Sbjct: 238 IYRDLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVYAAILIIGVI 291

Query: 566 VLALNRFL 573
            L  +  L
Sbjct: 292 GLICDVIL 299



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
                P+  +     +    +   + +A  IS L       L   S+ +  +  P ++  
Sbjct: 102 AFTTPPVQANAPWFHESLWHSIKLVFTAFFISSLIGIPLGILCGFSKTISQLTEPFVEFF 161

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + +P   F    V         K        I  I    ++     +  +   + R L E
Sbjct: 162 RYLPAPAFGALAVAILGINDAPK--------IAIIIIGTLFQQILIIANTTRLVDRSLIE 213

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
              +   +  +  +++ +P ++P +  ++ + +   W +++ +E+I          GI  
Sbjct: 214 AGFTLGTNKTKSLFHVVIPAALPEIYRDLRVLLGWAWTYLIVAELIG------STSGITW 267

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +I    + Q+   +  A+L +  +  + D +L +
Sbjct: 268 FITQQARYQNFDNVYAAILIIGVIGLICDVILMK 301


>gi|324998170|ref|ZP_08119282.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Pseudonocardia sp. P1]
          Length = 323

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 82/247 (33%), Gaps = 23/247 (9%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------------ITMFRVVVLIII 396
            V+  V     WQ +  +V+      V  +                  IT+ RV +   +
Sbjct: 80  AVLFVVLAAAGWQLMAVVVDSVLVPGVGDIAGELAGIVVDGSFAQELGITVLRVALGFAL 139

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++ +  GI +G    +    +P   L    P  V+  L V        NP + ++   
Sbjct: 140 AFVVAVAAGIAMGRNEFVQRFGEPAVLLGLTIPGLVWALLCVIWFGVGLANPVIAVA--- 196

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              +   +   +  G  +   D  E+A  +  +     R + LP + P    GA      
Sbjct: 197 -LSSAPALALTIYQGVRSVDPDLLEMAHVYRFSRTTRLRRLWLPALAPSLFAGARLGLSL 255

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
            W   ++ EV         ++G+G  +  +  + +   V+   L+    +  L   +   
Sbjct: 256 GWKVIVLVEVFG------MSSGVGYQLNNAFAEQNVAAVLAWTLLFAVVMAVLEYGVLQG 309

Query: 577 LYLYGTR 583
           L     R
Sbjct: 310 LERRAGR 316



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 102/255 (40%), Gaps = 15/255 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P +  ++       ++ +++  +    V     ++  I +D  S  Q    T LR+    
Sbjct: 79  PAVLFVVLAAAGWQLMAVVVDSVLVPGVGDIAGELAGIVVD-GSFAQELGITVLRVALGF 137

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++ +          ++  +     P + +  +IP L +    V++F       VI   L
Sbjct: 138 ALAFVVAVAAGIAMGRNEFVQRFGEPAVLLGLTIPGLVWALLCVIWFGVGLANPVIAVAL 197

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           ++  A        +  ++YQ + ++  DL E++  +R S   +   L +P   P L    
Sbjct: 198 SSAPA--------LALTIYQGVRSVDPDLLEMAHVYRFSRTTRLRRLWLPALAPSLFAGA 249

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +S GW  +V  E+  +        G+G  +  A  EQ++ A+L   L    V+ + +
Sbjct: 250 RLGLSLGWKVIVLVEVFGMSS------GVGYQLNNAFAEQNVAAVLAWTLLFAVVMAVLE 303

Query: 257 QLLFRPMIVWSNKFR 271
             + + +   + ++R
Sbjct: 304 YGVLQGLERRAGRWR 318


>gi|229551443|ref|ZP_04440168.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus rhamnosus LMS2-1]
 gi|258540812|ref|YP_003175311.1| ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|229315168|gb|EEN81141.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus rhamnosus LMS2-1]
 gi|257152488|emb|CAR91460.1| ABC transporter, permease protein [Lactobacillus rhamnosus Lc 705]
          Length = 510

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L A++++++     A       ++  VL+ I  ++Q+IP L  L  
Sbjct: 13  GELLSALGQHIEISLIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+    +  +  + Y  L +I    EE + +F +S  +
Sbjct: 73  LIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFGMSRLR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  +M      ++ +  +     +I   G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGIDRNDA 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L   L    +  ++  LL
Sbjct: 178 ALTLMGALAAALLAIVFSWLL 198



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+A +I IP+ +W+     +++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALILAVVIAIPLAVWVQTHAKVAAVLLQITGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP   P  ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|257868803|ref|ZP_05648456.1| nitrate ABC transporter [Enterococcus gallinarum EG2]
 gi|257802967|gb|EEV31789.1| nitrate ABC transporter [Enterococcus gallinarum EG2]
          Length = 242

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI-----------WLGCITMFRVVVLIIIAS 398
            +   ++  + W  I  + ++ +  D                     ++ RV++ +  A 
Sbjct: 7   FLWGALSFLLLWWGISLLADNRSLPDPYQTFQRFWQLRAELGLHAGASVIRVLISLFFAL 66

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+GI++G    I++ + P    L   P   F P+ +      +++      +L+  
Sbjct: 67  LIGIPLGIFLGRTK-IAAIVDPLLYFLYPIPKVAFLPVFMIFFGLGNVSK----VILIFS 121

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++ ++  G    P  + +V  ++        R++ILP I P        + G + 
Sbjct: 122 VIVIQVVVSIRDGVKEIPATYFQVMQNYTQNPLHQIRFLILPAIMPALFASMRVSIGISL 181

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +   +E       +  T G+G  I  +  K  + +++ G++++       
Sbjct: 182 ASLFFAE------NYNTTYGVGYLILSAWSKMDYEQMLSGIVVIALMGFFF 226



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 95/237 (40%), Gaps = 18/237 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++  L+F+L+   I++L        +P               L  +A  + +R+L ++  
Sbjct: 8   LWGALSFLLLWWGISLLADNRS---LPDPYQTFQRFWQLRAELGLHAGASVIRVLISLFF 64

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LL          +++    ++ P+L  +  IP + FL   +++F            ++ 
Sbjct: 65  ALLIGIPLGIFLGRTKIA-AIVDPLLYFLYPIPKVAFLPVFMIFFGLGN--------VSK 115

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  IF+  V  +  S+   +  IP    +V +++  +   +  +L +P  MP L  +M +
Sbjct: 116 VILIFSVIVIQVVVSIRDGVKEIPATYFQVMQNYTQNPLHQIRFLILPAIMPALFASMRV 175

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           S+      +  +E            G+G  I  A  + D   +L  ++ +  + F +
Sbjct: 176 SIGISLASLFFAE------NYNTTYGVGYLILSAWSKMDYEQMLSGIVVIALMGFFF 226


>gi|42781872|ref|NP_979119.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
 gi|42737796|gb|AAS41727.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
          Length = 278

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|317407312|gb|EFV87284.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 241

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + D +        L      +  R+L    +  L   +  T    SRRL   ++
Sbjct: 18  LPPPAFVWDTLRDLATSGDLWLNTRASLQRVLVGFALGSLLGLLLGTAMGLSRRLEAYVL 77

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+L +L F ++      P K I         I  + +  +T +  Q     
Sbjct: 78  PTFNALVQIPVLAWLPFVLLIVGIGEPLKYI--------LIAKAALVPVTLNTLQGFRQA 129

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L EV+R +  S  Q+   + VP ++P L   + +  +  W  +V  E++   +    
Sbjct: 130 SPALREVARVYGYSRRQEVLEVVVPLALPTLFTGLRLGFTKAWLSLVVVELVASSE---- 185

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ A++ +  + +  D+LL
Sbjct: 186 --GLGYLIVYGRQLFQLDLVMAAVIVVGAIGYAIDRLL 221



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+V   + S++ + +G  +G    + + + P    L   P   + P V+  V   
Sbjct: 43  ASLQRVLVGFALGSLLGLLLGTAMGLSRRLEAYVLPTFNALVQIPVLAWLPFVLLIVGIG 102

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L+       +  N + G        +EVA  +  +  +    +++P   P
Sbjct: 103 ----EPLKYILIAKAALVPVTLNTLQGFRQASPALREVARVYGYSRRQEVLEVVVPLALP 158

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       AW + +V E+ +       + GLG  I    +      V+  V+++  
Sbjct: 159 TLFTGLRLGFTKAWLSLVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAVIVVGA 212

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
              A++R L      +    L
Sbjct: 213 IGYAIDRLL-----DWAETRL 228


>gi|170691572|ref|ZP_02882737.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143777|gb|EDT11940.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 289

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 88/272 (32%), Gaps = 24/272 (8%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYM--LDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           V+      G  R   P    +L      + +    +     +  VA  + W    ++   
Sbjct: 11  VRLADAAQGERRRTRPPKAWRLPGEGPTAALSAASVAGLAALWWVATHLHWLPPLFLPTP 70

Query: 371 FTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                       G I            +  RV     +A++  +PVGI +G        +
Sbjct: 71  EAVWAAFVDASRGHIQGGLPLAQHLAWSALRVFGAFALAALTAVPVGILMGVSRVARGLL 130

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  +     P   + PLVV               +++       I     AG  +   +
Sbjct: 131 DPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIYLACFAPIAMAARAGVRSATTE 186

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A S   +  +  R+++LP   P  +TG   A G  W   + +E+ +       T G
Sbjct: 187 QIHAAYSLGGSFGQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAG 240

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           LG  +  ++       VV+G++++       +
Sbjct: 241 LGQMVLNASSFLRTDVVVMGIVLIGLIAWVFD 272



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 89/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+ + + LR+  A  ++ L       L   SR    +L P L+  + +P L +L   V
Sbjct: 91  LAQHLAWSALRVFGAFALAALTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  I+ +    +  +    + +   +    + S   S  Q  
Sbjct: 151 IWFGID--------ETAKIVVIYLACFAPIAMAARAGVRSATTEQIHAAYSLGGSFGQVV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 256

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + +++D   + L R ++ W  +
Sbjct: 257 VVMGIVLIGLIAWVFDLGMRALERWLVPWKGR 288


>gi|56962376|ref|YP_174101.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56908613|dbj|BAD63140.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 255

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     +       Q+L   P     PL++                L+  G  + I  N 
Sbjct: 85  GVSKISAMFFDSSIQMLRNIPHLALIPLIILWFGIG----EEGKIFLIALGVMFPIYLNT 140

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  +   D+ E+ +++ ++    + +IILPG  P  + G   A G  W   IV+E  +
Sbjct: 141 FHGIRSVDKDYIEMGNNYGLSNMAAFWHIILPGALPSILVGLRYALGIMWVTLIVAETIA 200

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                    G+G    ++ E      VVL +++        +
Sbjct: 201 ------AKDGIGFLAMDAREFMQMDVVVLSIILYALLGKLSD 236



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 88/215 (40%), Gaps = 14/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +I       +    +  +   +T R +  + I     F++  +   S+   M   
Sbjct: 36  LPAPSEIAAAAYTLVHSGEIWPHLWASTNRAVIGLFIGGGIGFMFGLINGVSKISAMFFD 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + ++++IP L  +   +++F     GK        IF I    ++ +  + +  + ++
Sbjct: 96  SSIQMLRNIPHLALIPLIILWFGIGEEGK--------IFLIALGVMFPIYLNTFHGIRSV 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +D  E+  ++ LS    FW++ +P ++P ++  +  ++   W  ++ +E I   D    
Sbjct: 148 DKDYIEMGNNYGLSNMAAFWHIILPGALPSILVGLRYALGIMWVTLIVAETIAAKD---- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             GIG     A +   +  ++ +++    +  L D
Sbjct: 204 --GIGFLAMDAREFMQMDVVVLSIILYALLGKLSD 236


>gi|254455460|ref|ZP_05068889.1| glycine betaine ABC transport system integral membrane protein
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082462|gb|EDZ59888.1| glycine betaine ABC transport system integral membrane protein
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 709

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   + +T   M  ++ + + F  +   L ++S R    + P+LD MQ +P   +L   
Sbjct: 129 GMWDESMQTLALMGLSVFLCVFFGVILGILCSQSNRFDNFMKPVLDTMQVMPAFVYLFPA 188

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F              AI A     +  +       +  + ++  E + SF  S  Q 
Sbjct: 189 LFFFGIGG--------APAILATMIYAMPPVIRLTNSGIRQVSKETIESATSFGSSKLQL 240

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P S+P ++  +          ++ +  +VV    I   GIG  + LAI+  D+ 
Sbjct: 241 LYKIKIPLSLPSIMMGINQ-------VIMMALALVVLACFIGAEGIGGQVWLAIRNLDVG 293

Query: 240 AILYAMLTMLGVIFLYDQL 258
             +   L +L +  L+D+ 
Sbjct: 294 WAMEGGLCILFMAILFDRF 312



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 83/213 (38%), Gaps = 19/213 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   +  T   +L ++ +          +A+ ++R   +   ILD MQ++P   +L   
Sbjct: 507 GIWTQSMVTLSSVLVSVALCFALGVPLGIIASYNKRFRDIQNVILDAMQTLPYFCYLIPV 566

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F         G  ++A+ A     +  +       L  +     EVSRSF  +  Q 
Sbjct: 567 LMFFG--------GGIVSAVLATVIYAIPPIIRLTSLGLTQVSGSFSEVSRSFGGTLIQT 618

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              +  P ++P LV     ++   +   + + +I          G+G  +   +   D  
Sbjct: 619 LNKVKFPLAVPSLVIGFNQTVIMAFAMQIVTPLIGG-------KGLGLEVFNGLARSDTG 671

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
             L A + ++ +  + D++     + W+ K R+
Sbjct: 672 RGLAAGIGIVLMAIIIDRIS----LAWTKKQRI 700



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 69/232 (29%), Gaps = 12/232 (5%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S  L I     +  +  G     +  I   + +  V  +      T+  + + + +    
Sbjct: 93  SPWLLIAAILFLPCLIAGGLKLGLYSIFVVYFWGAVG-MWDESMQTLALMGLSVFLCVFF 151

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +GI         + ++P    +   PA V+    +               L  +   
Sbjct: 152 GVILGILCSQSNRFDNFMKPVLDTMQVMPAFVYLFPALFFFGIGGA----PAILATMIYA 207

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++    +G      +  E A+SF  +  +    I +P   P  + G       A   
Sbjct: 208 MPPVIRLTNSGIRQVSKETIESATSFGSSKLQLLYKIKIPLSLPSIMMGINQVIMMALAL 267

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +++             G+G  +  +         + G L +    +  +RF
Sbjct: 268 VVLACFIG-------AEGIGGQVWLAIRNLDVGWAMEGGLCILFMAILFDRF 312



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 13/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + +   +  F  +    +G  +  I  ++    +     +     +T+  V+V + +   
Sbjct: 471 IPWWYTMSIFAAIGYFTVGFRFAIITVLL--LFFIAACGIWTQSMVTLSSVLVSVALCFA 528

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI   +              +   P   +   V+       ++  L   +  I  
Sbjct: 529 LGVPLGIIASYNKRFRDIQNVILDAMQTLPYFCYLIPVLMFFGGGIVSAVLATVIYAIP- 587

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+     G +     F EV+ SF  T  +    +  P   P  V G       A+ 
Sbjct: 588 ---PIIRLTSLGLTQVSGSFSEVSRSFGGTLIQTLNKVKFPLAVPSLVIGFNQTVIMAFA 644

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             IV+ +           GLG  +     +      +   + +    + ++R 
Sbjct: 645 MQIVTPLIGG-------KGLGLEVFNGLARSDTGRGLAAGIGIVLMAIIIDRI 690


>gi|220925361|ref|YP_002500663.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949968|gb|ACL60360.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 262

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++  R     +I   I   +G+  G             Q++   P     PLV+      
Sbjct: 67  VSFLRAATGFLIGGGIGFVLGLANGLSRVADRLTDTTVQMIRNVPHLSLIPLVILWFGIG 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + I  N + G  +      E+   + ++    +  ++LPG  P
Sbjct: 127 ----EEAKLFLVALGVFFPIYANTLHGIRSVDPQLIEMGRVYGLSRASLFWRVVLPGALP 182

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A G  W   IV+E  S       ++GLG    ++ E      VVL +LI   
Sbjct: 183 SIFVGLRYALGIMWLTLIVAETIS------ASSGLGYMAMQAREFMLVDVVVLAILIYAV 236

Query: 565 FVLALNRF 572
                +  
Sbjct: 237 LGKVADAL 244



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 97/263 (36%), Gaps = 17/263 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S R+ P +   +  V      ++ L   +    P D+V           L      + LR
Sbjct: 12  SARLAPWLLPAVVLVGWQAASSLGLVSTRFMPAPLDVVAAGWRLGRTGELWTNLWVSFLR 71

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
             +  +I     FV       SR    +    + +++++P L  +   +++F        
Sbjct: 72  AATGFLIGGGIGFVLGLANGLSRVADRLTDTTVQMIRNVPHLSLIPLVILWFGIG----- 126

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F +     + +  +    + ++   L E+ R + LS    FW + +P ++P 
Sbjct: 127 ---EEAKLFLVALGVFFPIYANTLHGIRSVDPQLIEMGRVYGLSRASLFWRVVLPGALPS 183

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +  ++   W  ++ +E I          G+G     A +   +  ++ A+L    +
Sbjct: 184 IFVGLRYALGIMWLTLIVAETISASS------GLGYMAMQAREFMLVDVVVLAILIYAVL 237

Query: 252 IFLYDQL---LFRPMIVWSNKFR 271
             + D L   L    + W+  +R
Sbjct: 238 GKVADALTRQLEHVCLAWNPAYR 260


>gi|170734924|ref|YP_001774038.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820962|gb|ACA95543.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 324

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      +   ++++PG+ P 
Sbjct: 191 APK----IAIIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 300

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 301 GLGTDIVLGLLGRRLFPW 318



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +    VIS         +      L  +  P L+
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTLFQQVLIIANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 275 TWYISQQARYQHFDNVYAAILMIGIIGLGTDIVLGLLGRRLFPW 318


>gi|187919924|ref|YP_001888955.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
 gi|187718362|gb|ACD19585.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 323

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y 
Sbjct: 130 SIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD 189

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +      +   ++++PGI P 
Sbjct: 190 GPK----IAIIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPD 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI +      F  V   ++++   
Sbjct: 246 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYITQQARYEHFDNVYAAIMMIGII 299

Query: 566 VLALN---RFLWHPLYLY 580
            L  +    +L   L+ +
Sbjct: 300 GLGTDLVLAYLGRRLFPW 317



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L Q    +   +    V+S +       +      +  +  P  +
Sbjct: 108 YTAFATPPASRDGVWLHQSLWHSIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFE 167

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 168 FFRYLPAPAFGALMVAILGIYDGPK--------IAIIVIGTLFQQVLIVANTTRKLEYGL 219

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 220 FEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 273

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             YI    + +    +  A++ +  +    D +   L R +  W
Sbjct: 274 TWYITQQARYEHFDNVYAAIMMIGIIGLGTDLVLAYLGRRLFPW 317


>gi|289809489|ref|ZP_06540118.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 243

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   +    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 27  PVAIILFALIAWQVSGVGMGIAAL-ISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLP 85

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA+   
Sbjct: 86  MGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFALP-- 140

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  ++     
Sbjct: 141 ---PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 197

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI VG       G+G  +   I   D+       + ++ +  + D+L
Sbjct: 198 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 243



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 11/191 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              IT+  V+  ++   +I +P+GIW+   P  +  ++P    +   PA V+   +V   
Sbjct: 64  QAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLF 123

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  N+   ++ I      I+   I G +  P D  E + SF  +  +    + LP 
Sbjct: 124 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 179

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G       A +  +++ + + G       GLG  +     +       +G + 
Sbjct: 180 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVG 232

Query: 562 MCCFVLALNRF 572
           +    + L+R 
Sbjct: 233 IVILAIILDRL 243


>gi|163853768|ref|YP_001641811.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163665373|gb|ABY32740.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 250

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 17/231 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   +       +    +  +    L                 +  
Sbjct: 35  LPPPSSIPAAFAREIANGAWLTAVVESLSHYVVGLGAGALAGVALGLATGMFAWFDSLTA 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I+ +++ IP L ++ F +++F             AA+F I     W + F+   ++ ++
Sbjct: 95  GIVRMLRPIPGLAWVPFAIIWFGV--------QPSAAVFIIAIGVFWIVFFATQGAVRHV 146

Query: 162 PRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
            RDL EV+++F       +   + +P + PG++  +  ++   W  VVA+E+  V     
Sbjct: 147 DRDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV----- 201

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             PGIG+ +  A        ++  MLTM G+  L+D   F  +  W  ++R
Sbjct: 202 --PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFDT-GFVALQGWLLRWR 249



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   VV +   ++  + +G+  G      S      ++L   P   + P  +       
Sbjct: 61  SLSHYVVGLGAGALAGVALGLATGMFAWFDSLTAGIVRMLRPIPGLAWVPFAIIWFGVQP 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504
                    ++  G  W + F           D  EVA +F   G       I+LP   P
Sbjct: 121 S----AAVFIIAIGVFWIVFFATQGAVRHVDRDLIEVAQAFGFRGPLARLTKILLPAATP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  TA G AW A + +E+           G+GA + +++   S   VV+ +L M  
Sbjct: 177 GILVGLRTALGQAWMAVVAAEIFG-------VPGIGARMMQASSLLSTDIVVVYMLTMAG 229

Query: 565 FVLALN 570
                +
Sbjct: 230 LYGLFD 235


>gi|50084691|ref|YP_046201.1| ABC transporter permease [Acinetobacter sp. ADP1]
 gi|49530667|emb|CAG68379.1| putative permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 279

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   IA+I  I  GI  G      +       +    P  V  P+ +       
Sbjct: 85  SLSRLFLGFSIAAISAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIGE 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L    +  LL+I    + I           P  + E+   + +    W R IILP I P 
Sbjct: 145 L----FKILLIIKACFFPIALATADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPP 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G AW   +  E+ + G      TG+G  +    +      V++GV I    
Sbjct: 201 LIGGLRIALGRAWLILVAVELLAAG------TGIGQMMELGRQMLRLDVVMVGVFITGVV 254

Query: 566 VLALNRFL 573
              L++ L
Sbjct: 255 GFGLDKVL 262



 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 93/243 (38%), Gaps = 15/243 (6%)

Query: 18  NIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++   L  +LV  +I+ + +  IQ    P+ + +     L    L  +   +  R+    
Sbjct: 34  SVISPLLVLLVWQLISSLQIFPIQILVPPKTVWNTFIALLQSGELQMHLKDSLSRLFLGF 93

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I+ +    +      +         + ++   IPI   +   ++ F           EL
Sbjct: 94  SIAAISAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIG--------EL 145

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I  I  +  + +  +   ++ NIP+   E+ + ++L        + +P  +P L+  +
Sbjct: 146 FKILLIIKACFFPIALATADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGL 205

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++   W  +VA E++  G       GIG  + L  +   L  ++  +     V F  D
Sbjct: 206 RIALGRAWLILVAVELLAAGT------GIGQMMELGRQMLRLDVVMVGVFITGVVGFGLD 259

Query: 257 QLL 259
           ++L
Sbjct: 260 KVL 262


>gi|153939784|ref|YP_001390974.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           F str. Langeland]
 gi|152935680|gb|ABS41178.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           F str. Langeland]
 gi|295319033|gb|ADF99410.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           F str. 230613]
          Length = 527

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 76/190 (40%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L +++I++        +  K+++L   ++   ++ Q+IP L  L F +           
Sbjct: 26  TLISVLIAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 81  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    I   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQLLFR 261
             + D +  R
Sbjct: 191 ALVIDWVTGR 200



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 11/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    +   ++ ++IA  I +P+GI I     ++  +  FA L  A P+      +
Sbjct: 14  QILSLLVAHIELTLISVLIAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +       +     +++  +   IL N   G +    D  E A    +T  +  + I
Sbjct: 74  IPLIGIG----SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLI 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   A   A     ++     G       GLG  +    +      ++ 
Sbjct: 130 KIPLAMPIIMAGIRIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILF 182

Query: 558 GVLIMCCFVLALN 570
           G +      L ++
Sbjct: 183 GAIPAAILALVID 195


>gi|269128859|ref|YP_003302229.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268313817|gb|ACZ00192.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 259

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +   +   +   FT             TM   V  + IA  I +PVG+ IG  P +    
Sbjct: 36  VLPYASTILGQTFTLPGEADFRTALVTTMQVWVSGLAIAVAIAVPVGVVIGALPLVDRLT 95

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P  +LL   P     PL +        N     + +  F   W +L + I G  A    
Sbjct: 96  GPLLELLRPIPPVALIPLALLAFG----NTGRMATTVAAFACSWPVLIHTIRGLRATDPI 151

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             +   +F         ++ LPG  P+  TG   A G +   +I +E+ + G       G
Sbjct: 152 AVDTMRTFGFGRPAVLWHVALPGAAPFIATGVRVAAGISLIVTITAELYAGGGQ-----G 206

Query: 539 LGAYIAES-TEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYLY 580
           +G+++ E+    G    ++  V+      L  +  L      L+ +
Sbjct: 207 IGSWLIEAGASAGQTHVILGAVVWAGILGLTADVLLSAASRRLFHW 252



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 18/215 (8%)

Query: 63  QYASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           + A  TT+++ +S + I++        +      +  +  P+L++++ IP +  +   ++
Sbjct: 57  RTALVTTMQVWVSGLAIAVAIAVPVGVVIGALPLVDRLTGPLLELLRPIPPVALIPLALL 116

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F N            A      +  W +     + L        +  R+F        W
Sbjct: 117 AFGNTGR--------MATTVAAFACSWPVLIHTIRGLRATDPIAVDTMRTFGFGRPAVLW 168

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA-IKEQDLLA 240
           ++ +P + P +   + ++        + +E+   G       GIGS++  A         
Sbjct: 169 HVALPGAAPFIATGVRVAAGISLIVTITAELYAGGGQ-----GIGSWLIEAGASAGQTHV 223

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRL 272
           IL A++    +    D LL    R +  W    R+
Sbjct: 224 ILGAVVWAGILGLTADVLLSAASRRLFHWHTSARV 258


>gi|218532725|ref|YP_002423541.1| ABC transporter inner membrane protein [Methylobacterium
           chloromethanicum CM4]
 gi|254563743|ref|YP_003070838.1| aliphatic sulfonates transport permease ssuC [Methylobacterium
           extorquens DM4]
 gi|218525028|gb|ACK85613.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
 gi|254271021|emb|CAX27028.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Methylobacterium extorquens DM4]
          Length = 250

 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 17/231 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   +       +    +  +    L                 +  
Sbjct: 35  LPPPSSIPAAFAREIANGAWLTAVVESLSHYVVGLGAGALAGVALGLATGMFAWFDSLTA 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I+ +++ IP L ++ F +++F             AA+F I     W + F+   ++ ++
Sbjct: 95  GIVRLLRPIPGLAWVPFAIIWFGV--------QPSAAVFIIAIGVFWIVFFATQGAVRHV 146

Query: 162 PRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
            RDL EV+++F       +   + +P + PG++  +  ++   W  VVA+E+  V     
Sbjct: 147 DRDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV----- 201

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             PGIG+ +  A        ++  MLTM G+  L+D   F  +  W  ++R
Sbjct: 202 --PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFDT-GFVALQGWLLRWR 249



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   VV +   ++  + +G+  G      S      +LL   P   + P  +       
Sbjct: 61  SLSHYVVGLGAGALAGVALGLATGMFAWFDSLTAGIVRLLRPIPGLAWVPFAIIWFGVQP 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504
                    ++  G  W + F           D  EVA +F   G       I+LP   P
Sbjct: 121 S----AAVFIIAIGVFWIVFFATQGAVRHVDRDLIEVAQAFGFRGPLARLTKILLPAATP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  TA G AW A + +E+           G+GA + +++   S   VV+ +L M  
Sbjct: 177 GILVGLRTALGQAWMAVVAAEIFG-------VPGIGARMMQASSLLSTDIVVVYMLTMAG 229

Query: 565 FVLALN 570
                +
Sbjct: 230 LYGLFD 235


>gi|197295123|ref|YP_002153664.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944602|emb|CAR57206.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 324

 Score =  100 bits (249), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      +   ++++PG+ P 
Sbjct: 191 APK----IAIIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 300

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 301 GLGTDIVLGLLGRRLFPW 318



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +    VIS         +      L  +  P L+
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTLFQQVLIIANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 275 TWYISQQARYQHFDNVYAAILMIGIIGLGTDIVLGLLGRRLFPW 318


>gi|261404927|ref|YP_003241168.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261281390|gb|ACX63361.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 259

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 98/252 (38%), Gaps = 18/252 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  ++V  I++ L    ++   +P+D++      L    L ++ + +  R     +I   
Sbjct: 20  ILLIVVWAILSNLNVISRKILPLPQDVLFSFRDLLLSGELIEHIAISFQRAFIGFLIGGG 79

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +   S     +L   + +++++P L  +   V++F           E + IF 
Sbjct: 80  IGLVLGFINGLSSIAEKLLDTTIQMVRNVPHLAMIPLVVLWFGIG--------EESKIFL 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    + ++   L E+   + L     FW + +P ++P ++  +  ++ 
Sbjct: 132 VAVGVLFPVYINTLHGIRSVDNGLIEMGSVYGLRTASLFWKVVLPGALPSILVGLRYALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ SE I          GIG     A +      IL  ++       L D   +L
Sbjct: 192 IMWLTLIVSETIATNS------GIGFLAMNAREYMQTDIILLTIVLYALFGKLADSIAKL 245

Query: 259 LFRPMIVWSNKF 270
           L R  + W+  +
Sbjct: 246 LERRFLRWNPNY 257



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIW----------LGCITMFRVVVLII 395
           W   +  + +     ++  I        QDVL+                I+  R  +  +
Sbjct: 16  WVLPILLIVVWAILSNLNVISRKILPLPQDVLFSFRDLLLSGELIEHIAISFQRAFIGFL 75

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   I + +G   G        +    Q++   P     PLVV        +       L
Sbjct: 76  IGGGIGLVLGFINGLSSIAEKLLDTTIQMVRNVPHLAMIPLVVLWFGIGEESK----IFL 131

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + +  N + G  +  N   E+ S + +     +  ++LPG  P  + G   A G
Sbjct: 132 VAVGVLFPVYINTLHGIRSVDNGLIEMGSVYGLRTASLFWKVVLPGALPSILVGLRYALG 191

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RF 572
             W   IVSE  +        +G+G     + E      ++L +++   F    +   + 
Sbjct: 192 IMWLTLIVSETIA------TNSGIGFLAMNAREYMQTDIILLTIVLYALFGKLADSIAKL 245

Query: 573 LWHPLYLY 580
           L      +
Sbjct: 246 LERRFLRW 253


>gi|30020911|ref|NP_832542.1| glycine betaine transport system permease protein [Bacillus cereus
           ATCC 14579]
 gi|218232077|ref|YP_002367503.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus B4264]
 gi|29896464|gb|AAP09743.1| Glycine betaine transport system permease protein [Bacillus cereus
           ATCC 14579]
 gi|218160034|gb|ACK60026.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus B4264]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 86/279 (30%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+ I     W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFFIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  LSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|47569049|ref|ZP_00239739.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus
           cereus G9241]
 gi|47554318|gb|EAL12679.1| glycine betaine/L-proline ABC transporter, glycine
           betaine/L-proline-binding/permease protein [Bacillus
           cereus G9241]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLSLVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLSLVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|326202341|ref|ZP_08192210.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium papyrosolvens DSM 2782]
 gi|325987459|gb|EGD48286.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium papyrosolvens DSM 2782]
          Length = 522

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 15/204 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   +           + A+  +++       L +  ++L   ++   +++Q+IP +  
Sbjct: 9   LNKTQILNLLVEHVKLTVIAVGFAIMLGVPLGILISYVKKLNRPVLGFANVIQAIPSMAL 68

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L F++ +             L A+  +    +  +  + +  + NI     E +R   L+
Sbjct: 69  LGFSIPFLGIG--------TLPAVVMVILYSLLPIIKNTFTGIQNINPLTLEAARGIGLT 120

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +Q    + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+ 
Sbjct: 121 KFQILTKIQIPLALPVIMAGVRIS------AVTAVGLMTIAAF-IGAGGLGFLVFSGIRT 173

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            +   IL   +    +  L D L+
Sbjct: 174 VNNNQILAGAIPACLLALLVDYLV 197



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ +  A ++ +P+GI I +   ++  +  FA ++ A P+       +  +    L    
Sbjct: 26  VIAVGFAIMLGVPLGILISYVKKLNRPVLGFANVIQAIPSMALLGFSIPFLGIGTL---- 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++I  +   I+ N   G         E A    +T ++    I +P   P  + G 
Sbjct: 82  PAVVMVILYSLLPIIKNTFTGIQNINPLTLEAARGIGLTKFQILTKIQIPLALPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +       +  +++ G +  C   L ++
Sbjct: 142 RISAVTAVGLMTIAAFIGAG-------GLGFLVFSGIRTVNNNQILAGAIPACLLALLVD 194

Query: 571 RFL 573
             +
Sbjct: 195 YLV 197


>gi|218897809|ref|YP_002446220.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus G9842]
 gi|218544027|gb|ACK96421.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus G9842]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 87/285 (30%), Gaps = 24/285 (8%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +     ++     + +  L    +     +G            + +   +  +  + W+ 
Sbjct: 6   RIPLGEWVDSFVASLYEHLEGIFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYT 65

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                 I      + +I+N   +   +  + L   ++   +++ I   I+          
Sbjct: 66  TRKVSLIIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQ 118

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFN 467
               S  ++P    +   PA       V     ++++ +     +   +IF     I F 
Sbjct: 119 NERFSKFLKPTLDFMQTMPA------FVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF- 171

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G    P D  E A++F  T  +    + LP      + G   +   + +  + + + 
Sbjct: 172 TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLV 231

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                     GLG  +  S  + +        L +    + L+R 
Sbjct: 232 G-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|172063179|ref|YP_001810830.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171995696|gb|ACB66614.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 363

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 89/289 (30%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++  + F   +  +  L      +    P    +L   +     L      + 
Sbjct: 69  RVVGFTDWAYTDTFGSAAWTIAALLLIAATLGHRVPATRARLARVRPAGPWLVALPLVLA 128

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 129 AWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLKLLALGFAYGVAVGFAVG 188

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 189 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS----AAAFLIALSTGFPVA 244

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 245 VLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 304

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 305 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 347



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A  T  
Sbjct: 112 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLK 171

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 172 LLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 224

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  S  + +    +  + ++ R   +V+R+   +       + +P ++P
Sbjct: 225 -PTSYSAAAFLIALSTGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALP 283

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 284 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 337

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 338 LFSGLIALLF 347


>gi|326780797|ref|ZP_08240062.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326661130|gb|EGE45976.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 296

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 12/257 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-- 376
           +   +R        +         +L   W  +     +     +    +       V  
Sbjct: 33  SPASVRRSRLRAAPRWVRRAVGPTLLLALWQVLSATGVLHADVLASPGTIARAGADLVAD 92

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ RVVV +++  ++   + +  G        +    Q+L   P     PL
Sbjct: 93  GTLPAAMGVSLQRVVVGLLLGGVVGTALALVSGLSRLGEDLVDATVQMLRTVPWVGLIPL 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             L+  G  +++  NV AG         E   S  +  W   R+
Sbjct: 153 FIIWLGIGEAPK----VALIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRH 208

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P  +TG   +   AW A +  E  +         G+G  + ++ E      +V
Sbjct: 209 VVLPGALPGAMTGLRYSLATAWLALVFGESIN------ADAGIGFLMNQAREFFRTDVIV 262

Query: 557 LGVLIMCCFVLALNRFL 573
           + +++     L  +  +
Sbjct: 263 VCLVVYAFLGLTADVIV 279



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 90/232 (38%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   +LP     +  R++  +++  +     A ++  SR    ++ 
Sbjct: 76  LASPGTIARAGADLVADGTLPAAMGVSLQRVVVGLLLGGVVGTALALVSGLSRLGEDLVD 135

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++            E   +  I     +++  ++Y  +  +
Sbjct: 136 ATVQMLRTVPWVGLIPLFIIWLGIG--------EAPKVALIALGVAFHLYLNVYAGIRGV 187

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  L  W    ++ +P ++PG +  +  S++  W  +V       G+++  
Sbjct: 188 DAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSLATAWLALV------FGESINA 241

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
             GIG  +  A +      I+  ++    +    D   ++L R ++ W   F
Sbjct: 242 DAGIGFLMNQAREFFRTDVIVVCLVVYAFLGLTADVIVRILERLLLQWRPTF 293


>gi|254502931|ref|ZP_05115082.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222439002|gb|EEE45681.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 263

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 88/234 (37%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ +     + +         + +  + +      +  + T   +++A V+ +     
Sbjct: 37  LVIVALAAGAGYAVHRKISLAAFIAVSLMLIINQGYWEETTETLALVIAASVVCMAVGIP 96

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A + R    + P+LD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 97  IGVYGAHNPRFFAAMRPVLDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 153

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E   +F  +  Q  W + +P+++P ++  +  ++     
Sbjct: 154 -----IRLTQLGVSSTPTALLEAGEAFGATKSQLLWKIELPYALPQIMAGLTQTIMLSLS 208

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G     A+   ++       + ++ +  + D+  
Sbjct: 209 MVVIAALV-------GADGLGVPTLRALNTVNIAQGFEVGVCIVLIAIVLDRFF 255



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 71/236 (30%), Gaps = 11/236 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + L I       G A+        +I                  T+  V+   ++   
Sbjct: 33  TPHPLVIVALAAGAGYAVHRKISLAAFIAVSLMLIINQGYWEETTETLALVIAASVVCMA 92

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+G++    P   + ++P   L+   P  V+    +       +   +   +  I  
Sbjct: 93  VGIPIGVYGAHNPRFFAAMRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA 152

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  T  +    I LP   P  + G       + +
Sbjct: 153 ---PIRL-TQLGVSSTPTALLEAGEAFGATKSQLLWKIELPYALPQIMAGLTQTIMLSLS 208

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +++ +           GLG     +    +  +     + +    + L+RF   
Sbjct: 209 MVVIAALVG-------ADGLGVPTLRALNTVNIAQGFEVGVCIVLIAIVLDRFFRK 257


>gi|221212109|ref|ZP_03585087.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221168194|gb|EEE00663.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 292

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 95/240 (39%), Gaps = 12/240 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +AFVL+     +      +  VP     +      +    L      +   +L    + +
Sbjct: 48  IAFVLIAAWEIVARVVANDLLVPTFSATLAAFVDGIVSGELLVKTGISMSVLLRGYALGV 107

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L  FV  ++A  +R    +L  +  +   +P +  L   +++F             + +F
Sbjct: 108 LLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTG--------SLLF 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  + +W +  +MY     +P  L    R++ L+G ++   + VP ++P ++  + +  
Sbjct: 160 VLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPSILSGLRVGW 219

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 220 AFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 277



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 7/272 (2%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +       +                ++++L   W  V   VA  +   +    +  F  
Sbjct: 22  ARDAEHAAPLPLVRRVADAAWFRRAAIAFVLIAAWEIVARVVANDLLVPTFSATLAAFVD 81

Query: 374 QDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             V   ++    I+M  ++    +  ++   +             +     +    P+  
Sbjct: 82  GIVSGELLVKTGISMSVLLRGYALGVLLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIA 141

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ +        +    L  +++    W +  N+  G    P   +    ++ +TG R
Sbjct: 142 LLPIALLWFGLGTGS----LLFVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLR 197

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I++P   P  ++G       AW   I +E+           GLG YI ++  +   
Sbjct: 198 QVLLILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELYT 255

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             V  G+  +    L +   ++  L     R 
Sbjct: 256 DRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 287


>gi|304317033|ref|YP_003852178.1| ABC transporter inner membrane protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778535|gb|ADL69094.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 243

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 82/199 (41%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+    +M R+V+  +I+ +I   +G  +    +I          L   P   + P  +
Sbjct: 44  LIYAILSSMRRLVIGYLISVVIGSIIGFLMIHFKYIEENFSSLILGLQTLPNLAWVPFSI 103

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               Y        +  ++  G+ + I+  V +G     + + + A +    G++ +  +I
Sbjct: 104 LWFGY----NESTIIFVIAIGSIFSIILAVDSGIKNVNSIYLKAAKTMGAKGYKLYSNVI 159

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G       AW   I  E+       +  TGLG  +++  +  +  +VV  
Sbjct: 160 IPAALPNIIAGLKEGWSFAWRGLISGEML------VSATGLGQILSKGKDASNISQVVAV 213

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +LI+    L +++F++  +
Sbjct: 214 MLIILSLGLVIDKFVFGRI 232



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 95/227 (41%), Gaps = 14/227 (6%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           I +        P  +  ++    +   L      +  R++   +IS++   +   L    
Sbjct: 17  IKIWNANIIPSPISVFILIIRLFETKMLIYAILSSMRRLVIGYLISVVIGSIIGFLMIHF 76

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           + +      ++  +Q++P L ++ F++++F           E   IF I    ++++  +
Sbjct: 77  KYIEENFSSLILGLQTLPNLAWVPFSILWFGYN--------ESTIIFVIAIGSIFSIILA 128

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   + N+     + +++    G++ +  + +P ++P ++  +    S  W  +++ EM+
Sbjct: 129 VDSGIKNVNSIYLKAAKTMGAKGYKLYSNVIIPAALPNIIAGLKEGWSFAWRGLISGEML 188

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           V         G+G  ++      ++  ++  ML +L +  + D+ +F
Sbjct: 189 VSAT------GLGQILSKGKDASNISQVVAVMLIILSLGLVIDKFVF 229


>gi|87119626|ref|ZP_01075523.1| putative taurine uptake ABC transporter permease protein
           [Marinomonas sp. MED121]
 gi|86165102|gb|EAQ66370.1| putative taurine uptake ABC transporter permease protein
           [Marinomonas sp. MED121]
          Length = 304

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 106/255 (41%), Gaps = 23/255 (9%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYASRTTLRMLSAMV 77
           AF+++I  I   L  ++   +P  +       ++        +L ++   + +R+ SA  
Sbjct: 64  AFLILIWHIATYLQWVKPLFLPSPVAVVQRFWEVATEGFANATLLEHTGWSMMRVFSAFF 123

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ L       L   +R +  +  PI++  + +P L +L   +++            E++
Sbjct: 124 LAFLTAVPIGILMGVNRIVRGLFDPIIEFYRPLPPLAYLPLVIIWLGIG--------EVS 175

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  I+ +    M  S    + ++  +    + S   + WQ   ++ +  ++P ++  M 
Sbjct: 176 KVVLIYLAIFAPMALSARAGVKSVAIEQIHAAYSMGATRWQVIRHIILINALPEILTGMR 235

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +  + +L+D 
Sbjct: 236 IGIGFGWTTLVAAEMVA------AQAGLGFMVLNAAEFLVTDVVIMGIIVIGIIAYLFDL 289

Query: 258 L---LFRPMIVWSNK 269
               L R ++ W  K
Sbjct: 290 FMRYLERKLVPWKGK 304



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 21/242 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCI----------TMFRVV 391
           +    +  ++  +A  + W    ++ +     Q    V   G            +M RV 
Sbjct: 60  LFTTAFLILIWHIATYLQWVKPLFLPSPVAVVQRFWEVATEGFANATLLEHTGWSMMRVF 119

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A +  +P+GI +G    +     P  +     P   + PLV+  +    ++    
Sbjct: 120 SAFFLAFLTAVPIGILMGVNRIVRGLFDPIIEFYRPLPPLAYLPLVIIWLGIGEVSK--- 176

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +L+       +  +  AG  +   +    A S   T W+  R+IIL    P  +TG  
Sbjct: 177 -VVLIYLAIFAPMALSARAGVKSVAIEQIHAAYSMGATRWQVIRHIILINALPEILTGMR 235

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G  W   + +E+ +         GLG  +  + E      V++G++++       + 
Sbjct: 236 IGIGFGWTTLVAAEMVA------AQAGLGFMVLNAAEFLVTDVVIMGIIVIGIIAYLFDL 289

Query: 572 FL 573
           F+
Sbjct: 290 FM 291


>gi|330820626|ref|YP_004349488.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327372621|gb|AEA63976.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 293

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 88/238 (36%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++   I+  ++            +      +    L      +   +L    I  + 
Sbjct: 53  AVLIVAWEIVARVVDNDLLVPTFVATLRAFVEGIASGELLVKTGISLSVLLRGYAIGAVL 112

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F   ++A  +R    +L  +  +   +P +  L   +++F             + +F +
Sbjct: 113 AFALTSVAVSTRIGRDLLSMLTAMFNPLPSIALLPIALLWFGLGTG--------SLLFVL 164

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S +W +  SMY     +P  L    R++ L G +  W + VP ++P ++  + +  + 
Sbjct: 165 VHSVLWPLALSMYTGFLGVPATLRMAGRNYGLRGLRFVWLILVPAALPSILSGLRVGWAF 224

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 225 AWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 280



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 86/265 (32%), Gaps = 9/265 (3%)

Query: 323 IRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-DVLYV 379
           +R       L   + +RV    +L + W  V   V   +   +    +  F        +
Sbjct: 32  VRASLASRVLGSSALRRVLIGAVLIVAWEIVARVVDNDLLVPTFVATLRAFVEGIASGEL 91

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +    I++  ++    I +++   +             +     +    P+    P+ + 
Sbjct: 92  LVKTGISLSVLLRGYAIGAVLAFALTSVAVSTRIGRDLLSMLTAMFNPLPSIALLPIALL 151

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +    L  +++    W +  ++  G    P   +    ++ + G R+   I++
Sbjct: 152 WFGLGTGS----LLFVLVHSVLWPLALSMYTGFLGVPATLRMAGRNYGLRGLRFVWLILV 207

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  ++G       AW   I +E+           GLG YI ++  +     V  G+
Sbjct: 208 PAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELYTDRVFAGL 265

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRC 584
             +    L +   ++  L     R 
Sbjct: 266 AAVIVIGLLVEHLVFDTLERLSIRR 290


>gi|49479143|ref|YP_036874.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49330699|gb|AAT61345.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 85/279 (30%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +             M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRVFSYIIGGFVDLLTNFLIIIPAILMIILLCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|327189741|gb|EGE56885.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli CNPAF512]
          Length = 289

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 91/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   +V  +    L          D +  +       +LP     T   +     +  +
Sbjct: 46  ILTLAIVWQVYASYLDNPLLFPTLSDTIVTLVDRFADGTLPARIWTTLQILFMGYALGTV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 106 LAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLG--------ASSLVFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     + R L  V  ++ L+G      + VP + P ++  + +  +
Sbjct: 158 LVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPSILTGLKIGWA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I       D+ A+   +LT++ +  + + L+F+
Sbjct: 218 FAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLDIPAVFAGLLTVIIIGLIVENLVFQ 275



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 6/190 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + +   + +++   + +        +  ++    +    PA    PL +       
Sbjct: 92  TLQILFMGYALGTVLAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLGA 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  +++    W +  N  +G        + V +++ +TG  +   I++P  FP 
Sbjct: 152 SS----LVFVLVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW   I +E+     +     GLG +I E+      P V  G+L +   
Sbjct: 208 ILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAVFAGLLTVIII 265

Query: 566 VLALNRFLWH 575
            L +   ++ 
Sbjct: 266 GLIVENLVFQ 275


>gi|299770166|ref|YP_003732192.1| ABC transporter permease [Acinetobacter sp. DR1]
 gi|298700254|gb|ADI90819.1| ABC transporter permease [Acinetobacter sp. DR1]
          Length = 279

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ +   IA+I  I  GI  G      +       +    P  V  P+ +       
Sbjct: 85  SLSRLFLGFSIAAISAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIGE 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L    +  LL+I    + I           P  + E+   + +    W R IILP I P 
Sbjct: 145 L----FKILLIIKACFFPIALATADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPP 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G AW   +  E+ + G      TG+G  +    +      V++GV I    
Sbjct: 201 LIGGLRIVLGRAWLILVAVELLAAG------TGIGQMMELGRQMLRLDVVMVGVFITGVV 254

Query: 566 VLALNRFL 573
              L++ L
Sbjct: 255 GFILDKVL 262



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  ++   I ++ +   Q    P+ + +     L    L  +   +  R+     I+ +
Sbjct: 39  LLVLLIWHLISSLQIFPTQILVPPKTVWNTFIALLQSGELQMHLKDSLSRLFLGFSIAAI 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +      +         + ++   IPI   +   ++ F           EL  I  
Sbjct: 99  SAIAFGIAYGANTLFRNYTYILFNVFYQIPIFVLIPIFILVFGIG--------ELFKILL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +  +   ++ NIP+   E+ + ++L        + +P  +P L+  + + + 
Sbjct: 151 IIKACFFPIALATADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIVLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +VA E++  G       GIG  + L  +   L  ++  +     V F+ D++L
Sbjct: 211 RAWLILVAVELLAAGT------GIGQMMELGRQMLRLDVVMVGVFITGVVGFILDKVL 262


>gi|312793365|ref|YP_004026288.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180505|gb|ADQ40675.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 238

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 94/221 (42%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +++     L  ++L      T  RML   +I+ +   V      KS  L   L P
Sbjct: 19  PSPISVIETFVRLLSDNTLTVAMIATVRRMLIGYLIAAILGVVVGLAIVKSEFLDKNLRP 78

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q++P + +L F ++++          +E A IF      ++++T ++   + N+ 
Sbjct: 79  LILGFQTLPSVCWLPFAILWYGL--------SEKAIIFVTAIGSIFSITLAVESGIKNVN 130

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +++   +G + +  +  P S+P ++  M    S  +  ++A EM+         
Sbjct: 131 PLYIKAAKTMGATGLRLYLNVIFPASLPFVISGMKQGWSFAFRALMAGEML------FAT 184

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+  +    + ++ +F P+
Sbjct: 185 KGLGQVLMVGRDLADMSQVISVMIVTIVFGLVIEKAIFGPL 225



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 78/199 (39%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+ R+++  +IA+I+ + VG+ I     +   ++P        P+  + P  +
Sbjct: 37  LTVAMIATVRRMLIGYLIAAILGVVVGLAIVKSEFLDKNLRPLILGFQTLPSVCWLPFAI 96

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  +   G+ + I   V +G       + + A +   TG R +  +I
Sbjct: 97  LWYGLSEK----AIIFVTAIGSIFSITLAVESGIKNVNPLYIKAAKTMGATGLRLYLNVI 152

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P+ ++G       A+ A +  E+         T GLG  +    +     +V+  
Sbjct: 153 FPASLPFVISGMKQGWSFAFRALMAGEML------FATKGLGQVLMVGRDLADMSQVISV 206

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +++   F L + + ++ PL
Sbjct: 207 MIVTIVFGLVIEKAIFGPL 225


>gi|206973541|ref|ZP_03234459.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|222096288|ref|YP_002530345.1| glycine betaine/l-proline ABC transporter , permease [Bacillus
           cereus Q1]
 gi|206747697|gb|EDZ59086.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|221240346|gb|ACM13056.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           cereus Q1]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|206971955|ref|ZP_03232904.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH1134]
 gi|206733340|gb|EDZ50513.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus AH1134]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 89/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  +++ L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHLEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|118478145|ref|YP_895296.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|118417370|gb|ABK85789.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis str. Al Hakam]
          Length = 278

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  +++ L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHLEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              I      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLIIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|254250602|ref|ZP_04943921.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124879736|gb|EAY67092.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 295

 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 102/258 (39%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLP 62
           P  + RRI    +    ++A VL+     +      +  VP     +      ++   L 
Sbjct: 33  PAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLAAFVQGIESGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    + +L  F   +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 93  VKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  + +W +  S+Y     +P  L+   R++ L+G ++   
Sbjct: 153 FGLGTG--------SLLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIAL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E     + 
Sbjct: 205 ILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLVENLVF 280



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 9/278 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           +  +  L                     +R  ++ +L   W  V   VA  +   + G  
Sbjct: 19  TRTLDTLPDVERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGAT 78

Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  F    +   ++    I+M  ++    +  ++   +             +     +  
Sbjct: 79  LAAFVQGIESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFN 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+    P+ +        +    L  +++    W +  ++  G    P   K    ++
Sbjct: 139 PLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNY 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++
Sbjct: 195 GLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQN 252

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +     V  G+  +    L +   ++  L     R 
Sbjct: 253 RNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRR 290


>gi|107022795|ref|YP_621122.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686966|ref|YP_840213.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105892984|gb|ABF76149.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652681|gb|ABK13320.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 295

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 102/258 (39%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLP 62
           P  + RRI    +    ++A VL+     +      +  VP     +      ++   L 
Sbjct: 33  PAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLAAFVQGVESGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    + +L  F   +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 93  VKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  + +W +  S+Y     +P  L+   R++ L+G ++   
Sbjct: 153 FGLGTG--------SLLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIAL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E     + 
Sbjct: 205 ILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLVENLVF 280



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 9/278 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           +  +  L                     +R  ++ +L   W  V   VA  +   + G  
Sbjct: 19  TRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGAT 78

Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  F    +   ++    I+M  ++    +  ++   +             +     +  
Sbjct: 79  LAAFVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFN 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+    P+ +        +    L  +++    W +  ++  G    P   K    ++
Sbjct: 139 PLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNY 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++
Sbjct: 195 GLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQN 252

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +     V  G+  +    L +   ++  L     R 
Sbjct: 253 RNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRR 290


>gi|296159223|ref|ZP_06842049.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890482|gb|EFG70274.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 292

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 96/237 (40%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A  +   +    +        P  ++      +   +L +  S +  R  S  VI  L
Sbjct: 51  LVAIAIWWAVSEAHVIKSGLLVSPAQVLATAWQQIIGGALLKALSASLAREASGFVIGTL 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  ++   SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 111 GGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALL- 169

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T      +  +PR   EV+R+FR S WQ    + +P ++P +   + +++ 
Sbjct: 170 -------PVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALI 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +    +  + L
Sbjct: 223 YSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNAL 274



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 87/240 (36%), Gaps = 11/240 (4%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVV 392
                +  +    W+ V     I          V    +Q ++    L  ++  + R   
Sbjct: 44  WRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLATAWQQIIGGALLKALSASLAREAS 103

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +I ++  + +G  +GF    +  I P            + PL+            ++L
Sbjct: 104 GFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFL 163

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S          +  +   G  A P  + EVA +F  + W+  R +ILP   P   TG   
Sbjct: 164 S----LAALLPVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYL 219

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   +W A++ +E        +  +G+G  + + +E+     V+ GV+++     ALN  
Sbjct: 220 ALIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNAL 274


>gi|240137648|ref|YP_002962119.1| ABC transporter, permease [Methylobacterium extorquens AM1]
 gi|240007616|gb|ACS38842.1| ABC transporter, permease [Methylobacterium extorquens AM1]
          Length = 332

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     +D   +      ++  +    +I + +   +G+ IG+   +     P  + +  
Sbjct: 120 ILEVFVEDWPRLGGSILASLKLLAGGYLIGAGLGFVLGVAIGWSKAVGYWAHPILRFVGP 179

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P+          +     + L+   T + +     +G +     + +VA +  
Sbjct: 180 LPATAWLPMAFFVFP----SSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLG 235

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GGA+   +V+E+          +GLG Y+  + 
Sbjct: 236 ASPAFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLG------VKSGLGWYLQWAQ 289

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              ++  +   +++M      L   L+ 
Sbjct: 290 GWAAYANMYAALIVMALMCSGLITLLFR 317



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +   +    +I     FV       S+ +G    PIL  +  +P   +L
Sbjct: 127 DWPRLGGSILASLKLLAGGYLIGAGLGFVLGVAIGWSKAVGYWAHPILRFVGPLPATAWL 186

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 187 PMAFFVF--------PSSWSASTFLIALATGFPVTVLTWSGVAGVNKAYFDVARTLGASP 238

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 239 AFLVLRVAVPAALPHVFVGLFMGLGGAFAVLVVAEMLGVKS------GLGWYLQWAQGWA 292

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A++ M  +      LLFR
Sbjct: 293 AYANMYAALIVMALMCSGLITLLFR 317


>gi|92380886|dbj|BAE93388.1| putative ABC transporter subunit [Thiobacillus thioparus]
          Length = 226

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           + FR+   + +A  I +PVGI  G      +      Q         + P+ V   S + 
Sbjct: 90  SGFRLGWGLGLAIAIGVPVGIVFGRVKWFQNLFNVPFQFFRMISPLSWEPIAVVVFSGW- 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  L+     W ++F+  AG +    ++ +VA +     +     II+P I   
Sbjct: 149 ---EEAIIFLIAMAAVWPVIFSTAAGLAKVDPNWFKVARNLGAKPYHMVTRIIIPAILFD 205

Query: 506 YVTGAITACGGAWNASIVSEV 526
            +TG   A G AW   I +E 
Sbjct: 206 VLTGIRLALGVAWIVIIPAEF 226



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P       P   +  ++      +  R+   + +++        +  + +    +    
Sbjct: 66  SPAATFAAYPEIWEDGTIQAALKSSGFRLGWGLGLAIAIGVPVGIVFGRVKWFQNLFNVP 125

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
               + I  L +    VV F         G E A IF I  + VW + FS    L  +  
Sbjct: 126 FQFFRMISPLSWEPIAVVVFS--------GWEEAIIFLIAMAAVWPVIFSTAAGLAKVDP 177

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
           +  +V+R+     +     + +P  +  ++  + +++   W  ++ +E
Sbjct: 178 NWFKVARNLGAKPYHMVTRIIIPAILFDVLTGIRLALGVAWIVIIPAE 225


>gi|190892828|ref|YP_001979370.1| proline/glycine betaine ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190698107|gb|ACE92192.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
 gi|327189486|gb|EGE56642.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CNPAF512]
          Length = 281

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 94/234 (40%), Gaps = 15/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++VI +I+ L   ++ +        +  + +      +  + T   +L++  +S++    
Sbjct: 54  LIVIAVISALAFWLRRSIGITLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA+   +   + P+LD+MQ+IP   +L   ++ F     G V G     IFAI   
Sbjct: 114 LGIAAARRAWIYAAMRPVLDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFAIPAP 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L E + +F     Q    + +PF+ P ++  +  ++     
Sbjct: 171 -----IRLTRLGIISTPPSLVEAAVAFGARPVQVLRKVELPFATPQIMAGLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV + ++          G+G  +  A+   ++     A L ++ +  + D++ 
Sbjct: 226 MVVIAALV-------GADGLGVPVVRALNTVNVAKGFEAGLCIVILAIILDRMF 272



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             V+  ++    W      +  FT   +L ++  G       T+  V+    ++ +I IP
Sbjct: 54  LIVIAVISALAFWLRRSIGITLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    R  I + ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 114 LGIAAARRAWIYAAMRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPA---P 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G  + P    E A +F     +  R + LP   P  + G       + +  ++
Sbjct: 171 IRL-TRLGIISTPPSLVEAAVAFGARPVQVLRKVELPFATPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +    +  +     L +    + L+R  
Sbjct: 230 AALVG-------ADGLGVPVVRALNTVNVAKGFEAGLCIVILAIILDRMF 272


>gi|56965155|ref|YP_176887.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911399|dbj|BAD65926.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 256

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 100/262 (38%), Gaps = 17/262 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +         L  +L    +++          P ++V      +    L  + + +  R 
Sbjct: 9   QDGVAPWIVPLLLLLSWQFMSVYGLFSHLLASPLEVVQAAWRMIANGELVSHMATSFYRA 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+  +I      +       S      L   + +++++P L  +   V+Y          
Sbjct: 69  LAGFIIGGGLGLLLGIANGLSPFSRKYLDSTIQMLRNVPNLALIPLVVIYMGVG------ 122

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A IF +    ++ +  + +  + +I +++ E+S+ + LS W+ F  +  P ++P +
Sbjct: 123 --ESAKIFLVAVGVLFPVYINTFHGIRSIDQNMLEMSKMYGLSKWKLFTKVIFPGALPSI 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++   W  ++ +E I          GIG     A +   +  I+ A+L    + 
Sbjct: 181 LVGIRYALGVMWVTLIVAETIA------ATSGIGYMSMNAREFMQVDVIILAILLYALLG 234

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L     + ++ W+  +R
Sbjct: 235 KLADTLATFAEKRLLRWNPAYR 256



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 15/229 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-----LYVIWLGC 384
           ++ Q   +    +++ +        +++   +  +                   ++    
Sbjct: 3   SWRQWYQDGVAPWIVPLLLLLSWQFMSVYGLFSHLLASPLEVVQAAWRMIANGELVSHMA 62

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            + +R +   II   + + +GI  G  P     +    Q+L   P     PLVV  +   
Sbjct: 63  TSFYRALAGFIIGGGLGLLLGIANGLSPFSRKYLDSTIQMLRNVPNLALIPLVVIYMGVG 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +  N   G  +   +  E++  + ++ W+ +  +I PG  P
Sbjct: 123 ----ESAKIFLVAVGVLFPVYINTFHGIRSIDQNMLEMSKMYGLSKWKLFTKVIFPGALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             + G   A G  W   IV+E  +       T+G+G     + E     
Sbjct: 179 SILVGIRYALGVMWVTLIVAETIA------ATSGIGYMSMNAREFMQVD 221


>gi|254558848|ref|YP_003065943.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium
           extorquens DM4]
 gi|254266126|emb|CAX21878.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens DM4]
          Length = 279

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 91/242 (37%), Gaps = 17/242 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +   L   +    P  +   +        L  +   T +R+            +   L
Sbjct: 46  AAVAAGLASGRLLPPPSRVAAALWTLAASGELWTHVEATLIRVGLGFAFGAGAGILAGAL 105

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A    L  ++ P L  ++++P L ++   +++F  L   KV    +   F ++      
Sbjct: 106 TATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGILETPKVALIAVGVFFPVY------ 159

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
               +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA
Sbjct: 160 --IGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLPATLTALRTGLGLGFLFVVA 217

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +E++   +      G+G  +    +      IL A+++   V    D     L  P++ W
Sbjct: 218 AELMGASE------GLGYLLLDGQQFSKPDQILAAIISFAVVGKAADAGLVALTSPLVRW 271

Query: 267 SN 268
            +
Sbjct: 272 QD 273



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV +     +   I  G      P +   + P  Q L A P+  + PL +      
Sbjct: 83  ATLIRVGLGFAFGAGAGILAGALTATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGIL 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V    ++      EV   F ++     R I+LP + P
Sbjct: 143 ET----PKVALIAVGVFFPVYIGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T   T  G  +   + +E+         + GLG  + +  +     +++  ++    
Sbjct: 199 ATLTALRTGLGLGFLFVVAAELMG------ASEGLGYLLLDGQQFSKPDQILAAIISFAV 252

Query: 565 FVLALN 570
              A +
Sbjct: 253 VGKAAD 258


>gi|227818437|ref|YP_002822408.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337436|gb|ACP21655.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 278

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W      +             +     +   +      ++       ++A+ I +
Sbjct: 39  ILVGVWQAAAPFIDPLFGSYPSQIFSSFLVMMESGTLARAFWQSIQPFFAGYLLAAAIGV 98

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P G+ +G      + +  +     A P     PL++               +++     +
Sbjct: 99  PAGLLLGRYRVAEAALGIYVMAGYATPLIALVPLLMVWFGLGFA----VKMVIIFLLAFF 154

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G  A P    EV ++F     R  R I+LP   PY + G   A G A  A I
Sbjct: 155 PICINTWVGVKAVPRTLVEVGTAFCAPQSRIMRQIVLPATLPYIMAGLRLAIGKAVIAMI 214

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++E  +        +GLG  I  +       E+ + ++ +    + L+R +
Sbjct: 215 IAEFLT------AISGLGGIIINAANSFRTAEMFVPIICVMILAVVLDRLV 259



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 89/240 (37%), Gaps = 16/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTV--PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            ++ ++++G+       I       P  I     + ++  +L +   ++     +  +++
Sbjct: 34  TISLLILVGVWQAAAPFIDPLFGSYPSQIFSSFLVMMESGTLARAFWQSIQPFFAGYLLA 93

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                    L  + R     L   +    + P++  +   +V+F   +           +
Sbjct: 94  AAIGVPAGLLLGRYRVAEAALGIYVMAGYATPLIALVPLLMVWFGLGF--------AVKM 145

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF    + +  + +  +  +PR L EV  +F     +    + +P ++P ++  + ++
Sbjct: 146 VIIFLLAFFPICINTWVGVKAVPRTLVEVGTAFCAPQSRIMRQIVLPATLPYIMAGLRLA 205

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      ++ +E +        + G+G  I  A        +   ++ ++ +  + D+L+
Sbjct: 206 IGKAVIAMIIAEFLT------AISGLGGIIINAANSFRTAEMFVPIICVMILAVVLDRLV 259


>gi|222102603|ref|YP_002539642.1| ABC transporter [Agrobacterium vitis S4]
 gi|221739204|gb|ACM39937.1| ABC transporter [Agrobacterium vitis S4]
          Length = 282

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ +I  LL      +    ++ +  +   V  L      T   +++A  ++L+      
Sbjct: 54  VVALIAALLGWRLINSKAGLLIGVAMLGCTVMGLWAETMSTLALVITATFMALVIGIPVG 113

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            +A   +    ++ P+LD++Q++P   +L  T+                 A+ A     +
Sbjct: 114 IVAGFVQAFDKIVEPVLDLIQTLPPYIYLLPTIALMGYG--------PATALLATVIVAM 165

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +   P D  E+ ++  L+ WQ F  + +PF++P ++  +  S+   +  V
Sbjct: 166 PPAIRLTSLGIRRTPNDFIELGQANGLTSWQMFVKIRLPFAIPSVMAGINQSLMMAFGMV 225

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + ++  G       G+G  I  A++  ++   + A + ++ +  + D+L
Sbjct: 226 VIAGIVGSG-------GLGETIYSAVRTLNIATSINAAIAIVILTMVLDRL 269



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 88/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V ++  +  F VV  +A  + W+ I           +L    +G       T+  V+   
Sbjct: 43  VLWLFQLAPFYVVALIAALLGWRLINSKAGLLIGVAMLGCTVMGLWAETMSTLALVITAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A +I IPVGI  GF       ++P   L+   P  ++    ++ + Y      L   +
Sbjct: 103 FMALVIGIPVGIVAGFVQAFDKIVEPVLDLIQTLPPYIYLLPTIALMGYGPATALLATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    PNDF E+  +  +T W+ +  I LP   P  + G   + 
Sbjct: 163 V----AMPPAIRLTSLGIRRTPNDFIELGQANGLTSWQMFVKIRLPFAIPSVMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +    +    +   + +    + L+R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYSAVRTLNIATSINAAIAIVILTMVLDRL 269


>gi|284045525|ref|YP_003395865.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949746|gb|ADB52490.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 285

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 78/202 (38%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  D   +  +   ++    +  ++A+++ I  G+ IG        + P    L A P  
Sbjct: 77  TLIDGGQLGSILSASLQAWTIGFVLAAVVGIGFGLVIGSSVAADRLLGPLVWPLYATPWL 136

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            + PL  +   +        +  ++     + IL N  AG              F    W
Sbjct: 137 AYAPLSKAWFGFGLT----PVVFIVFIAGVFPILLNTSAGIRTVNRSLVNAGRIFGANRW 192

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +R ++LP   PY + G   +      A +V+E+ + G       G+G  IA +    +
Sbjct: 193 QIYRKVLLPATVPYILAGMRQSAVLTTVALVVAEMITSG------RGVGGMIAYTANTYA 246

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             +   G++I+  + + +++ +
Sbjct: 247 TEQSFAGIVIVVVWSVMMSQLI 268



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  +    I N+ L        P D +D     +D   L    S +        V++ +
Sbjct: 45  LLLVLWQWLIGNLELVNPVFLPPPLDTLDGFQTLIDGGQLGSILSASLQAWTIGFVLAAV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  +   S     +L P++  + + P L +   +  +F               +F 
Sbjct: 105 VGIGFGLVIGSSVAADRLLGPLVWPLYATPWLAYAPLSKAWFGFGLTP--------VVFI 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F + V+ +  +    +  + R L    R F  + WQ +  + +P ++P ++  M  S  
Sbjct: 157 VFIAGVFPILLNTSAGIRTVNRSLVNAGRIFGANRWQIYRKVLLPATVPYILAGMRQSAV 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
                +V +EMI  G       G+G  IA              ++ ++    +  QL+  
Sbjct: 217 LTTVALVVAEMITSG------RGVGGMIAYTANTYATEQSFAGIVIVVVWSVMMSQLIGL 270

Query: 260 -FRPMIVWS 267
             R +  W+
Sbjct: 271 AGRRLAPWT 279


>gi|91783657|ref|YP_558863.1| sulfate ester ABC transporter inner membrane protein [Burkholderia
           xenovorans LB400]
 gi|91687611|gb|ABE30811.1| Putative ABC sulfate ester transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
          Length = 292

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 13/255 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
               P          +  L+A  +   +    +        P  ++      +   +L +
Sbjct: 33  QPRRPLLARFDWRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLATAWQQIVSGALLK 92

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             S +  R  S  VI  L   +  ++   SR    ++ P  D  + I +  ++    V+F
Sbjct: 93  ALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV+   LAA+          +T      +  +PR   EV+R+FR S WQ    +
Sbjct: 153 GLGDAAKVVFLSLAALL--------PVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAV 204

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + +++   W   + +E ++V  +     GIG+ +    ++  +  +L+
Sbjct: 205 ILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLF 259

Query: 244 AMLTMLGVIFLYDQL 258
            ++ +    +  + L
Sbjct: 260 GVIVVGVTGWALNAL 274



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 11/249 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             P           +  +    W+ V     I          V    +Q ++    L  +
Sbjct: 35  RRPLLARFDWRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLATAWQQIVSGALLKAL 94

Query: 386 T--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           +  + R     +I ++  + +G  +GF    +  I P            + PL+      
Sbjct: 95  SASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGL 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 ++LS          +  +   G  A P  + EVA +F  + W+  R +ILP   
Sbjct: 155 GDAAKVVFLS----LAALLPVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   +W A++ +E        +  +G+G  + + +E+     V+ GV+++ 
Sbjct: 211 PSIFTGIYLALIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGVIVVG 265

Query: 564 CFVLALNRF 572
               ALN  
Sbjct: 266 VTGWALNAL 274


>gi|13475926|ref|NP_107496.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026686|dbj|BAB53282.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 246

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 11/215 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
           +   +W          I   S G +            +WL    + +R+ +  +IAS + 
Sbjct: 10  LGLAWWAATGLEWVKPIFLPSPGSVATQIAKLAADGTLWLDLTASAYRISIGFLIASALS 69

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+ IG      + I+P    +   P   F PL +               L++  GT 
Sbjct: 70  IPIGVLIGSFRSWEAGIEPLVDFIRYMPVVAFVPLSILWAGTGDTQK----FLIIFIGTF 125

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  +  V+      P DF  +  +  +   +    I++P   P        + G AW   
Sbjct: 126 FQQVLMVMDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLRISLGWAWTWL 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++E+ +       T+GLG  I  S        ++
Sbjct: 186 VLAELVA------ATSGLGYRITVSQRYFQTNTII 214



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 94/242 (38%), Gaps = 19/242 (7%)

Query: 23  LAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +A  + +G+      G+          P  +   +       +L    + +  R+    +
Sbjct: 4   VAVFVGLGLAWWAATGLEWVKPIFLPSPGSVATQIAKLAADGTLWLDLTASAYRISIGFL 63

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+   +     L    R     + P++D ++ +P++ F+  ++++       K +     
Sbjct: 64  IASALSIPIGVLIGSFRSWEAGIEPLVDFIRYMPVVAFVPLSILWAGTGDTQKFL----- 118

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               IF    +     +  ++  +P D   + R+  L   +    + VP ++PG+   + 
Sbjct: 119 ---IIFIGTFFQQVLMVMDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLR 175

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+   W ++V +E++          G+G  I ++ +      I+  +L +  +  + DQ
Sbjct: 176 ISLGWAWTWLVLAELVA------ATSGLGYRITVSQRYFQTNTIIGYILLLGVLGLITDQ 229

Query: 258 LL 259
           ++
Sbjct: 230 VM 231


>gi|314933035|ref|ZP_07840401.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           caprae C87]
 gi|313654354|gb|EFS18110.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           caprae C87]
          Length = 504

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 82/216 (37%), Gaps = 26/216 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I+ +       L  K++++  +++ I  ++Q+IP L  L  
Sbjct: 13  GQLLSTIIEHIQISFIALLIATIIAVPLGILLTKTKKISEIVMNIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + AI A+    +  +  + Y  +  +   L E ++   +  ++
Sbjct: 73  MIPIFGIG--------RVPAIIALVVYALLPILRNTYTGIEEVDPSLVEAAKGIGMKPFR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P + P ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIATPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              D   IL   +    +  ++D L+ R M   S K
Sbjct: 173 DRNDSSLILIGAIPAALLAIIFD-LILRYMEKLSYK 207



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+II +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATIIAVPLGILLTKTKKISEIVMNIAAVLQTIPSLALLGLMIPIFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIEEVDPSLVEAAKGIGMKPFRRLTKVELPIATPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDSSLILIGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRYMEKLSYKKL 209


>gi|302527643|ref|ZP_07279985.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
 gi|302436538|gb|EFL08354.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
          Length = 271

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 78/273 (28%), Gaps = 15/273 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTY 373
           L R             L           L   W       A+           +      
Sbjct: 9   LPRAETAAPKRAQRRRLPSLRRWISPVALVAAWQIASSTGALPPDKLSSPWTVLQAGVDV 68

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     +++ RV     + ++  + +G   G      + + P  Q+L   P    
Sbjct: 69  ARSGELGSAFVVSLGRVGAGFALGALAGLLLGAISGLSRWGEALVDPPVQMLRTLPFLGL 128

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +                L+  G  + +  NV +G         E A +   T    
Sbjct: 129 IPLFILWFGIG----EETKIFLVALGVAFPLYLNVHSGIRTADPQLGEAARALGFTRGER 184

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LPG  P  + G   + G AW A IV E  +         G+G  I  + E     
Sbjct: 185 LWHVVLPGALPQALVGLRQSLGVAWLALIVGETVN------ADAGIGYLINNAREFLRTD 238

Query: 554 ---EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                ++   ++     AL R L      +  R
Sbjct: 239 VVVVGLVVYAVLGLVTDALVRLLERRALRWRAR 271



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 104/269 (38%), Gaps = 21/269 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQ 63
           P    RR  P++   ++ V ++    I          + + P  ++           L  
Sbjct: 17  PKRAQRRRLPSLRRWISPVALVAAWQIASSTGALPPDKLSSPWTVLQAGVDVARSGELGS 76

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+ +   +  L   +   ++  SR    ++ P + +++++P LG +   +++F
Sbjct: 77  AFVVSLGRVGAGFALGALAGLLLGAISGLSRWGEALVDPPVQMLRTLPFLGLIPLFILWF 136

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      E   IF +     + +  +++  +      L E +R+   +  ++ W++
Sbjct: 137 GIG--------EETKIFLVALGVAFPLYLNVHSGIRTADPQLGEAARALGFTRGERLWHV 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P  +  +  S+   W  ++      VG+TV    GIG  I  A +      ++ 
Sbjct: 189 VLPGALPQALVGLRQSLGVAWLALI------VGETVNADAGIGYLINNAREFLRTDVVVV 242

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWSNK 269
            ++    +  + D   +LL R  + W  +
Sbjct: 243 GLVVYAVLGLVTDALVRLLERRALRWRAR 271


>gi|303327705|ref|ZP_07358145.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport-like
           protein, permease component [Desulfovibrio sp. 3_1_syn3]
 gi|302862066|gb|EFL85000.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport-like
           protein, permease component [Desulfovibrio sp. 3_1_syn3]
          Length = 264

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 62/179 (34%), Gaps = 10/179 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++    +  ++A ++ +P+G+ +G+        +P  +L+   P   + PL V       
Sbjct: 74  SLQEAAIGYVLALLVGLPLGLAMGWFKVAEGLFRPIFELIRPIPPIAWIPLTVFWFGIGL 133

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++        + N   G         ++A ++    W+ +  + +P   P 
Sbjct: 134 TGK----VFIIWIAGIVPCVINAYVGVRMTSPVLIQMARTYGANDWQIFTQLCIPSSLPM 189

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                  A    W   + +E+ +        +GLG  I           +VLG++ +  
Sbjct: 190 VFGALQLALAYCWTNLVGAELLA------ADSGLGFLITMGGRVARPDLIVLGMICVGV 242



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 78/194 (40%), Gaps = 14/194 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   +  +   +        V++LL            +    +  PI ++++ IP + ++
Sbjct: 63  DGAVMATHFKTSLQEAAIGYVLALLVGLPLGLAMGWFKVAEGLFRPIFELIRPIPPIAWI 122

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             TV +F     GK        +F I+ + +     + Y  +      L +++R++  + 
Sbjct: 123 PLTVFWFGIGLTGK--------VFIIWIAGIVPCVINAYVGVRMTSPVLIQMARTYGAND 174

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ F  L +P S+P +   + ++++  W  +V +E++          G+G  I +  +  
Sbjct: 175 WQIFTQLCIPSSLPMVFGALQLALAYCWTNLVGAELLAADS------GLGFLITMGGRVA 228

Query: 237 DLLAILYAMLTMLG 250
               I+  M+ +  
Sbjct: 229 RPDLIVLGMICVGV 242


>gi|229085575|ref|ZP_04217810.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-44]
 gi|228697723|gb|EEL50473.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-44]
          Length = 208

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 87/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R   +L P LD MQ++P   +L   + +F 
Sbjct: 20  TMQTVALVLTSVIISIIVGIPIGILASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 80  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTTSQKLFKVQ 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 132 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 184

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 185 GLAIVVIAIVLDRI 198



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 11/162 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  ++P    +   PA V+    ++      +   +   +  +  T  +       
Sbjct: 48  NERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDL 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G    P D  E A++F  T  +    + LP      + G   +   + +  + + +    
Sbjct: 104 GIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG-- 161

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                  GLG  +  S  + +        L +    + L+R 
Sbjct: 162 -----APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIVLDRI 198


>gi|170734695|ref|YP_001773809.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169820733|gb|ACA95314.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 295

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 102/258 (39%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLP 62
           P  + RRI    +    ++A VL+     +      +  VP     +      ++   L 
Sbjct: 33  PAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLAAFVQGIESGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    + +L  F   +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 93  VKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  + +W +  S+Y     +P  L+   R++ L+G ++   
Sbjct: 153 FGLGTG--------SLLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIAL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E     + 
Sbjct: 205 ILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLVENLVF 280



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 9/278 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           +  +  L                     +R  ++ +L   W  V   VA  +   + G  
Sbjct: 19  TRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGAT 78

Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  F    +   ++    I+M  ++    +  ++   +             +     +  
Sbjct: 79  LAAFVQGIESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFN 138

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+    P+ +        +    L  +++    W +  ++  G    P   K    ++
Sbjct: 139 PLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNY 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG R    I++P   P  ++G       AW   I +E+           GLG YI ++
Sbjct: 195 GLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQN 252

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +     V  G+  +    L +   ++  L     R 
Sbjct: 253 RNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRR 290


>gi|23502444|ref|NP_698571.1| glycine betaine/L-proline ABC transporter permease [Brucella suis
           1330]
 gi|161619521|ref|YP_001593408.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|254704827|ref|ZP_05166655.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|260565930|ref|ZP_05836400.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261755523|ref|ZP_05999232.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|23348434|gb|AAN30486.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella suis 1330]
 gi|161336332|gb|ABX62637.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260155448|gb|EEW90528.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261745276|gb|EEY33202.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 278

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|134291004|ref|YP_001114773.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134134193|gb|ABO58518.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 324

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +      +   ++++PG+ P 
Sbjct: 191 APK----IAIIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTNKLKLLTHVVIPGVLPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 300

Query: 566 VLALN---RFLWHPLYLY 580
            +  +     L   L+ +
Sbjct: 301 GVGTDLALGALGRRLFPW 318



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +    VIS         +      L  +  P L+
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIRIIFWGFVISSAIGVPLGIVCGTFSALARLQEPFLE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTLFQQVLIVANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   +  +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAAMTLGTNKLKLLTHVVIPGVLPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D     L R +  W
Sbjct: 275 TWYISQQARYQHFDNVYAAILMIGIIGVGTDLALGALGRRLFPW 318


>gi|254511123|ref|ZP_05123190.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534834|gb|EEE37822.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 687

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 82/606 (13%), Positives = 183/606 (30%), Gaps = 84/606 (13%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++IG++  L   +    +       +   L        +  T   +  ++ ++L+    
Sbjct: 95  PILIGLVTALGWYLGGLPMAALGFFGLSFVLASGY-WAESMNTLALVAVSVPVALIMGGA 153

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +  R+   +  +LDIMQ++P   +LT  ++ F     G V+G   +AI+A    
Sbjct: 154 IGILANEVPRVKTFVQAVLDIMQTVPTFAYLTPLLLLFGF---GPVVGLIASAIYA---- 206

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  ++   L  +  +++E +     +  Q+ + + +P +   ++  +   +     
Sbjct: 207 -APPMARNVMLGLERVEPEIKEAAIMSGGTRLQQLFQVEIPAATTQIMVGVNQCLMAALS 265

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ-------- 257
            V+ + +I   +       IG  + L +++      L A L ++    + D+        
Sbjct: 266 MVIIAAVIGGFND------IGWEVLLTMRKAQFGESLMAGLVIVVFAVVIDRMSGTLATE 319

Query: 258 -----------------LLFRPMIVW-------------SNKFRLERTTGIYPADSWVLY 287
                            L       W             +       T        W+  
Sbjct: 320 RKRHDSRVVWAVLGFAVLFTAAFWAWLPNPSDLTVLDPMAGAIDSGLTAFTQANGPWLDA 379

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           L   + F   +        + L                      + L    R      + 
Sbjct: 380 LKNNSLFYVLLPLRIGLDQAVLPFTWGFQWTPAMSWGLFAAAAAIALLMAWRGHLTGGLV 439

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--------------------LGCITM 387
              ++  +  GIA     +++        +   W                       +++
Sbjct: 440 ALILIGMLETGIANLPWPFVLTAAAALGWVAGGWRLAALSVGLLCTILVSGLWERALLSL 499

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +     +   +++   +G+       + + ++P   +L   P  VF   V+        +
Sbjct: 500 YLSGAAVFFCAVLGGLIGLASAVWSPVWALVRPVCDMLQTIPLFVFLIPVLMVFQIGEFS 559

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L +    I     Y       G    P +  E A S   T W+  R +  P   P  +
Sbjct: 560 AFLAICAYAIVPMIRY----TRHGLVNTPEEMMEAAISSGATEWQIMRDVRAPYAAPTIL 615

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A+   +++ +         TTGLG  I  +  +      +     M    L
Sbjct: 616 LGLNQTILYAFAMLVIAALIG-------TTGLGQSIYLALGQADVGLGISAGAAMAILAL 668

Query: 568 ALNRFL 573
             +R +
Sbjct: 669 IADRMV 674



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 93/238 (39%), Gaps = 19/238 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +     +  +  G +   +   ++  + ++     L + A  +     +A+    +
Sbjct: 456 WPFVLTAAAALGWVAGGWRLAALSVGLLCTILVS----GLWERALLSLYLSGAAVFFCAV 511

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    +A    +  ++ P+ D++Q+IP+  FL   ++ F           E +A  A
Sbjct: 512 LGGLIGLASAVWSPVWALVRPVCDMLQTIPLFVFLIPVLMVFQIG--------EFSAFLA 563

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  M       L N P ++ E + S   + WQ    +  P++ P ++  +  ++ 
Sbjct: 564 ICAYAIVPMIRYTRHGLVNTPEEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTIL 623

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +  +V + +I          G+G  I LA+ + D+   + A   M  +  + D+++
Sbjct: 624 YAFAMLVIAALI-------GTTGLGQSIYLALGQADVGLGISAGAAMAILALIADRMV 674



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 83/229 (36%), Gaps = 15/229 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
           + ++ G+   + W   G  +    +  + +V+  G       T+  V V + +A I+   
Sbjct: 94  WPILIGLVTALGWYLGGLPMAALGFFGLSFVLASGYWAESMNTLALVAVSVPVALIMGGA 153

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI     P + + +Q    ++   P   +   ++    +  +   +  ++         
Sbjct: 154 IGILANEVPRVKTFVQAVLDIMQTVPTFAYLTPLLLLFGFGPVVGLIASAIY----AAPP 209

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  NV+ G      + KE A     T  +    + +P      + G       A +  I+
Sbjct: 210 MARNVMLGLERVEPEIKEAAIMSGGTRLQQLFQVEIPAATTQIMVGVNQCLMAALSMVII 269

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + V    +       +G  +  +  K  F E ++  L++  F + ++R 
Sbjct: 270 AAVIGGFND------IGWEVLLTMRKAQFGESLMAGLVIVVFAVVIDRM 312


>gi|294341798|emb|CAZ90227.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 248

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 67/189 (35%), Gaps = 9/189 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ R      IA++I +P+G+ +G  P I   ++       + P++   PL +      
Sbjct: 56  ATVLRTFYAFAIAAVIGVPLGVALGSSPAIYRSVEFLVDFFRSTPSSALIPLFMLLFGLS 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            LN       +  F     ILFN   G                ++ W  ++ ++L    P
Sbjct: 116 DLNK----IAIAAFAAVLLILFNSAYGVMNARKTRVLAVKVMGVSRWHVFKDVLLLESLP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G  T    A    IV+E+          TGLG  I  + +  +   +   +L+   
Sbjct: 172 QTFVGLRTGVSMALVIVIVAEMFIGSD-----TGLGQRIINAQQVLNIKGMYAAILLTGI 226

Query: 565 FVLALNRFL 573
              ALN   
Sbjct: 227 LGYALNLLF 235



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 13/218 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D +  +  +L   S+      T LR   A  I+ +           S  +   + 
Sbjct: 31  LPSPEDTLATLWTSLIDGSMWPDFQATVLRTFYAFAIAAVIGVPLGVALGSSPAIYRSVE 90

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++D  +S P    +   ++ F      K+  A  AA+  I         F+    + N 
Sbjct: 91  FLVDFFRSTPSSALIPLFMLLFGLSDLNKIAIAAFAAVLLI--------LFNSAYGVMNA 142

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +      +   +S W  F  + +  S+P     +   +S     V+ +EM +  DT   
Sbjct: 143 RKTRVLAVKVMGVSRWHVFKDVLLLESLPQTFVGLRTGVSMALVIVIVAEMFIGSDT--- 199

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I  A +  ++  +  A+L    + +  + L 
Sbjct: 200 --GLGQRIINAQQVLNIKGMYAAILLTGILGYALNLLF 235


>gi|241767947|ref|ZP_04765492.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241360877|gb|EER57705.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 203

 Score =   99 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 10/161 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               + +    Q++   PA    PLV+                L+     + I  N   G
Sbjct: 36  KLFETLLDSTIQMVRNIPALALIPLVILWFGI----DESAKLFLIAVSVFFPIYLNTFHG 91

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                    E+  ++ +T W+ +R IILPG     + G   + G  W   IV+E  S   
Sbjct: 92  IRGVDPGLIEMGRTYGLTRWQLYRQIILPGALSSILVGLRFSLGLMWVILIVAETIS--- 148

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +G+G     + E      V++G+L+        + F
Sbjct: 149 ---AQSGIGYLTMNAREFLQTDIVLVGILLYALLGKLADVF 186



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           +    +L   + ++++IP L  +   +++F           E A +F I  S  + +  +
Sbjct: 36  KLFETLLDSTIQMVRNIPALALIPLVILWFGID--------ESAKLFLIAVSVFFPIYLN 87

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            +  +  +   L E+ R++ L+ WQ +  + +P ++  ++  +  S+   W  ++ +E I
Sbjct: 88  TFHGIRGVDPGLIEMGRTYGLTRWQLYRQIILPGALSSILVGLRFSLGLMWVILIVAETI 147

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
                     GIG     A +      +L  +L    +  L D     L R  + W   +
Sbjct: 148 S------AQSGIGYLTMNAREFLQTDIVLVGILLYALLGKLADVFAKALERYWLRWHPGY 201

Query: 271 R 271
           +
Sbjct: 202 Q 202


>gi|227499962|ref|ZP_03930055.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Anaerococcus tetradius ATCC 35098]
 gi|227218071|gb|EEI83344.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Anaerococcus tetradius ATCC 35098]
          Length = 248

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 10/242 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +++ S   V  +  IFW  +   V        +  +    T  +   ++    I++ R+V
Sbjct: 1   MKVKSKIFVFLIFFIFWQILSLLVDKAFLPSPLATLDGLITAIEKGLILKHALISLMRIV 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + ++I+ +  + +GI IG++  +   + P    L   P  VF P++V      +L+  + 
Sbjct: 61  LSLLISLLFALAIGIPIGYKEEVYQLLYPLVSSLYPIPKVVFLPVLVLFFGLGNLSKIVL 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +S ++ F     +L  +I      P D      S   +       +ILP I P  +T   
Sbjct: 121 ISSIIFF----QLLLVIIDSVRNLPRDLYISMYSLSQSFKDILINLILPYIIPDILTALR 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G A +    SE  +         GLG +I ++  +  + ++  G+++M    L L +
Sbjct: 177 ICIGTAISVLFFSETFASFD------GLGYFILDTMGRREYEQMYGGIIVMSLLGLILYK 230

Query: 572 FL 573
            +
Sbjct: 231 LV 232



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P   +D +   ++   + ++A  + +R++ +++ISLLF             +  +L 
Sbjct: 29  LPSPLATLDGLITAIEKGLILKHALISLMRIVLSLLISLLFALAIGIPIGYKEEVYQLLY 88

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP + FL   V++F            L+ I  I +   + +   +  S+ N+
Sbjct: 89  PLVSSLYPIPKVVFLPVLVLFFGLG--------NLSKIVLISSIIFFQLLLVIIDSVRNL 140

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PRDL     S   S       L +P+ +P ++  + + +      +  SE          
Sbjct: 141 PRDLYISMYSLSQSFKDILINLILPYIIPDILTALRICIGTAISVLFFSETFA------S 194

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             G+G +I   +  ++   +   ++ M  +  +  +L+ 
Sbjct: 195 FDGLGYFILDTMGRREYEQMYGGIIVMSLLGLILYKLVL 233


>gi|153003302|ref|YP_001377627.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
 gi|152026875|gb|ABS24643.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. Fw109-5]
          Length = 254

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 90/218 (41%), Gaps = 14/218 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +   +   L    L     R+  R+      S +    +  L A+S  +   L P
Sbjct: 33  PGPLAVAGSLGRMLADGRLGAATGRSLARLAQGYTFSAVAGVPFGVLLARSELVRGGLRP 92

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+  +Q++P + +L   +++F          +E A +F +    V+ +  +   ++  + 
Sbjct: 93  IVLGLQALPSICWLPLAILWFGL--------SETAILFVVVMGSVFAIAIATEDAVSGVD 144

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   + +  + G +    + +P ++PG++  + +  S  W  ++A E++ V       
Sbjct: 145 PLLLRAAGTLGIRGARFHGGVLLPAALPGILTGLKLGWSFAWRALMAGELLFVAG----- 199

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            G+G  +    +  D   ++  ML ++ +    D++LF
Sbjct: 200 -GLGQLLQNGRELLDAAQVMGVMLAIVAIGVAIDRVLF 236



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+      +++  +P G+ +     +   ++P    L A P+  + PL +       
Sbjct: 58  SLARLAQGYTFSAVAGVPFGVLLARSELVRGGLRPIVLGLQALPSICWLPLAILWFGLSE 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +++ G+ + I        S         A +  I G R+   ++LP   P 
Sbjct: 118 T----AILFVVVMGSVFAIAIATEDAVSGVDPLLLRAAGTLGIRGARFHGGVLLPAALPG 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW A +  E+           GLG  +    E     +V+  +L +   
Sbjct: 174 ILTGLKLGWSFAWRALMAGELL------FVAGGLGQLLQNGRELLDAAQVMGVMLAIVAI 227

Query: 566 VLALNRFLW 574
            +A++R L+
Sbjct: 228 GVAIDRVLF 236


>gi|239832460|ref|ZP_04680789.1| choline ABC transporter, permease protein [Ochrobactrum intermedium
           LMG 3301]
 gi|239824727|gb|EEQ96295.1| choline ABC transporter, permease protein [Ochrobactrum intermedium
           LMG 3301]
          Length = 278

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + +         AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMAIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPSSLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIILDRIF 272



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +   
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTVLGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMA 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P+   E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPSSLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIILDRIF 272


>gi|326331224|ref|ZP_08197518.1| glycine betaine/L-proline ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325950994|gb|EGD43040.1| glycine betaine/L-proline ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 303

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 97/236 (41%), Gaps = 18/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A ++V+ +I +L+      T+   +  ++  ++D   L     +TT  +L A +++L+ 
Sbjct: 49  IAMIVVLAVIALLVSRQVVLTLVLTVGLLLIESMD---LWYETMQTTTSVLVATLVALVI 105

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A S  L   L P+LD+MQ++P+  +L  T+++F     G   G     +FA+
Sbjct: 106 GIPLGIWSAFSPPLRAALRPVLDLMQTLPVFVYLLPTILFFGV---GDAPGLVATIVFAL 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  +  +  E + +F    W+    + +P +   ++  +   +  
Sbjct: 163 PPA-----VRLTQLGINQVDAETVEAAAAFGAGRWEILREVQLPLARESIMTGVNQVIML 217

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + ++        +         A++   + A +   L ++ +    D++
Sbjct: 218 ALSMVVVAGLVGGSGLGGVV-------VNAVQGLQIGASIEGGLAVVVIAIYLDRV 266



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 76/187 (40%), Gaps = 6/187 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIA 397
           +  +  I    V+  +A+ ++ Q +  +V        + + + +    T   V+V  ++A
Sbjct: 43  LGGLPPIAMIVVLAVIALLVSRQVVLTLVLTVGLLLIESMDLWYETMQTTTSVLVATLVA 102

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IP+GIW  F P + + ++P   L+   P  V+    +  + ++ +     L   ++
Sbjct: 103 LVIGIPLGIWSAFSPPLRAALRPVLDLMQTLPVFVYL---LPTILFFGVGDAPGLVATIV 159

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           F      +     G +    +  E A++F    W   R + LP      +TG       A
Sbjct: 160 F-ALPPAVRLTQLGINQVDAETVEAAAAFGAGRWEILREVQLPLARESIMTGVNQVIMLA 218

Query: 518 WNASIVS 524
            +  +V+
Sbjct: 219 LSMVVVA 225


>gi|27375490|ref|NP_767019.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27348627|dbj|BAC45644.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 287

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 82/207 (39%), Gaps = 10/207 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++P  A  +   +       ++   ++  LA  +R     L  +  +   +P +  L  
Sbjct: 81  GTIPMRAWASLKVLFMGYSAGIVLAAIFTVLAISTRIGTDFLETVTAMFNPLPAIALLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S +W +  + +    ++   L  V R++ L G  
Sbjct: 141 ALIWFGLGNG--------SLVFVLIHSVLWPVALNTHSGFKSVSNTLRMVGRNYGLRGLP 192

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +   ++  + +  +  W  ++A+E++          G+G +I       D+
Sbjct: 193 YVAKILIPAAFGSILTGLKIGWAFAWRTLIAAELVF--GVSSGQGGLGWFIFENRNLLDI 250

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
            A+   +LT++ +    + L+FR +  
Sbjct: 251 PAVFAGLLTVIIIGLFVENLIFRAIER 277



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 6/191 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++  + +      ++     +        +  ++    +    PA    PL +      
Sbjct: 89  ASLKVLFMGYSAGIVLAAIFTVLAISTRIGTDFLETVTAMFNPLPAIALLPLALIWFGLG 148

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + +    L  ++I    W +  N  +G  +  N  + V  ++ + G  +   I++P  F 
Sbjct: 149 NGS----LVFVLIHSVLWPVALNTHSGFKSVSNTLRMVGRNYGLRGLPYVAKILIPAAFG 204

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG       AW   I +E+     +     GLG +I E+      P V  G+L +  
Sbjct: 205 SILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAVFAGLLTVII 262

Query: 565 FVLALNRFLWH 575
             L +   ++ 
Sbjct: 263 IGLFVENLIFR 273


>gi|134293652|ref|YP_001117388.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134136809|gb|ABO57923.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 295

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 94/238 (39%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  + V   +  ++            +      +    L    + +   +L    + +LF
Sbjct: 53  LVLIAVWETVARIVANDLLVPTFGATLVAFVQGIASGELLVKTAISMSVLLRGYALGVLF 112

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            FV  +LA  +R    VL  +  +   +P +  L   +++F             + +F +
Sbjct: 113 AFVLTSLAVSTRAGRDVLSMLTSMFNPLPSIALLPIALLWFGLGTG--------SLLFVL 164

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  SMY     +P  L+   R++ LSG ++   + VP ++P ++  + +  + 
Sbjct: 165 VHAVLWPLALSMYTGFAGVPATLKMAGRNYGLSGLRQIALILVPAALPSILSGLRVGWAF 224

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 225 AWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 280



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 81/246 (32%), Gaps = 7/246 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           ++ +L   W  V   VA  +   + G  +V          ++    I+M  ++    +  
Sbjct: 51  IALVLIAVWETVARIVANDLLVPTFGATLVAFVQGIASGELLVKTAISMSVLLRGYALGV 110

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +    +             +     +    P+    P+ +        +    L  +++ 
Sbjct: 111 LFAFVLTSLAVSTRAGRDVLSMLTSMFNPLPSIALLPIALLWFGLGTGS----LLFVLVH 166

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W +  ++  G +  P   K    ++ ++G R    I++P   P  ++G       AW
Sbjct: 167 AVLWPLALSMYTGFAGVPATLKMAGRNYGLSGLRQIALILVPAALPSILSGLRVGWAFAW 226

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
              I +E+           GLG YI ++  +     V  G+  +    L +   ++  L 
Sbjct: 227 RTLIAAELVFGA--SAGQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVFDTLE 284

Query: 579 LYGTRC 584
               R 
Sbjct: 285 RVTVRR 290


>gi|282864721|ref|ZP_06273776.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282560660|gb|EFB66207.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 659

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 89/528 (16%), Positives = 159/528 (30%), Gaps = 51/528 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  S R    L P+LD MQ +P   +L   V+ F 
Sbjct: 149 TMQTLALMVVAVLASVVLGILLGLAAGLSDRTFRFLRPVLDTMQVLPAFAYLLPVVLVFG 208

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PG        A+ A        M       L      + E   S   +G Q+     
Sbjct: 209 IGVPG--------AVLATVVYAAPPMARLTALGLRGADAGVMEAVTSLGATGRQRLLTAR 260

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 261 LPLARKELLLGLNQTIMMALSMAVIASVIGAG-------GLGDRVYQALSSVDVGAALAA 313

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERT--TGIYPADSWVLYLFRKTNFLRFIGYSS 302
            + ++ +  + D    R       K   E T    +  A  W L                
Sbjct: 314 GIPIVLLAVVLD----RTTEAAGRKAGTEPTGRAALRGARGWALAAVLAAAVAVVGRLGG 369

Query: 303 WNFF-------------SPLSNNVKKLCRTLGVIR--FHFPENFLQLCSNQRVSYMLDIF 347
              +             +     V  L   + VI     +  +F     N     +  + 
Sbjct: 370 GRVWPEGGVVPVAGPVNTAKDWMVDHLYTGIPVIGGTADWAAHFTSWILNPLRGGLQGLP 429

Query: 348 WFCVVCGVAIGI----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           W+ V+  VA        W++    V       VL V      T+ +VV  + +  ++   
Sbjct: 430 WWSVLLIVAALAWTIGTWRTALTAVLAMAAIGVLGVWEPSMDTLSQVVAAVAVTLVLGFA 489

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           V +       +   ++P   +    P  V+   VV+              +  +      
Sbjct: 490 VAVGAARSERLERGLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAVVRI 549

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G         E A S   T  +  R + LP   P  +              I+
Sbjct: 550 ----TTQGLRGVDPAAMECARSLGATPGQQLRQVQLPLARPALLLAVNQGVVLVLAVVII 605

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +   G        LG  +     +G     ++    + C  L L+R
Sbjct: 606 GGLVGSGA-------LGYDVVFGLAQGDLATGLVAGAAIVCLGLMLDR 646


>gi|154496983|ref|ZP_02035679.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC
           29799]
 gi|150273807|gb|EDN00924.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC
           29799]
          Length = 249

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q +  +V   T  D    I     T+ R++  + I   +   +G+  G  P I     P 
Sbjct: 39  QVLSTLVRLMTQSDFGATIG---TTILRLIAGLAIGVGVGAVLGLLFGLCPKIEDVGTPL 95

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             +L A P   +  L +    +           ++   T   ++ N+  G  +      E
Sbjct: 96  IHVLQAIPPVCWVVLALVWFGFNGK----PCVFIVATATVPTVVINLSHGVRSVDPQLLE 151

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +A  +  + W+  R++ LP I PY+ +      GG W  +++ EV +        +G+G 
Sbjct: 152 MARLYQFSRWKMLRHVTLPSIRPYFRSALEIVIGGGWKLAVMGEVLT------TNSGIGG 205

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I  +        ++   L++        R L
Sbjct: 206 AITTARLNIEPDAIIAWSLLLVLGCYLTQRLL 237



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L   L++G   +         VP    ++  +   +           T LR+++ + I +
Sbjct: 13  LGVCLLLGAWQLASLFFPPLVVPPIAQVLSTLVRLMTQSDFGATIGTTILRLIAGLAIGV 72

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V   L     ++  V  P++ ++Q+IP + ++   +V+F               +F
Sbjct: 73  GVGAVLGLLFGLCPKIEDVGTPLIHVLQAIPPVCWVVLALVWFGFNG--------KPCVF 124

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + T+ V  +  ++   + ++   L E++R ++ S W+   ++ +P   P     + + +
Sbjct: 125 IVATATVPTVVINLSHGVRSVDPQLLEMARLYQFSRWKMLRHVTLPSIRPYFRSALEIVI 184

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GGW   V  E++          GIG  I  A    +  AI+   L ++   +L  +LL
Sbjct: 185 GGGWKLAVMGEVLTTNS------GIGGAITTARLNIEPDAIIAWSLLLVLGCYLTQRLL 237


>gi|126698478|ref|YP_001087375.1| glycine betaine/carnitine/choline ABC transporter substrate-binding
           protein [Clostridium difficile 630]
 gi|115249915|emb|CAJ67734.1| ABC-type transport system, glycine betaine/carnitine/choline
           permease [Clostridium difficile]
          Length = 517

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 84/216 (38%), Gaps = 15/216 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L    + +   +     +++++I+++       + ++   L   ++  ++++Q++P +
Sbjct: 10  ILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSM 69

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AIF +    +  +  + Y  + +I   + E ++   
Sbjct: 70  ALLGLLVPILGIG--------SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIG 121

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+  Q  + +  P ++P ++  + +S       V A  ++ +    I   G+G  +   +
Sbjct: 122 LTRNQTLFKIQFPLALPIIMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGV 174

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   IL   +    +  L D L  +  +  + K
Sbjct: 175 QTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK 210



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 29  VTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----SK 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 85  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 145 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 197

Query: 571 RFL 573
              
Sbjct: 198 YLF 200


>gi|306519512|ref|ZP_07405859.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium difficile
           QCD-32g58]
          Length = 493

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +++++I+++       + ++   L   ++  ++++Q++P +  L   V           
Sbjct: 4   TVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----- 58

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AIF +    +  +  + Y  + +I   + E ++   L+  Q  + +  P ++P 
Sbjct: 59  ---SKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPI 115

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL   +    +
Sbjct: 116 IMGGVRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAGAIPSCII 168

Query: 252 IFLYDQLLFRPMIVWSNK 269
             L D L  +  +  + K
Sbjct: 169 ALLVDYLFSKIEVAVTPK 186



 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ +P+GI I     +   +  F  L+ A P+     L+V  +       + 
Sbjct: 5   VTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMALLGLLVPILGIG----SK 60

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G ++      E A    +T  +    I  P   P  + G 
Sbjct: 61  PAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPIIMGGV 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   L ++
Sbjct: 121 RISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAIPSCIIALLVD 173

Query: 571 RFL 573
              
Sbjct: 174 YLF 176


>gi|330818424|ref|YP_004362129.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
 gi|327370817|gb|AEA62173.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
          Length = 327

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   + LR+  A  ++ LF      L   SR    +L P L+  + +P L +L   V
Sbjct: 129 LAEHLGWSALRVFGAFALAALFGIPAGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVV 188

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A I  IF +    +  +    + +   +    + S   S  Q  
Sbjct: 189 IWFGID--------ETAKIVVIFLACFAPIAMAARAGVRSATGEQIAAAWSLGASPAQVV 240

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 241 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 294

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + + +D   ++L R  + W  +
Sbjct: 295 VVMGIVLIGAIAWGFDLAMRVLERRWVPWKGR 326



 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 25/254 (9%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVV 392
            +    ++   A    W    ++ +  T        W G I            +  RV  
Sbjct: 83  SVAGLALLWWAATHFGWVPPLFLPSPATVWRAFVDAWHGNIQGGVPLAEHLGWSALRVFG 142

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A++  IP GI +G        + P  +     P   + PLVV              
Sbjct: 143 AFALAALFGIPAGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGI----DETAK 198

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++       I     AG  +   +    A S   +  +  R+++LP   P  +TG   
Sbjct: 199 IVVIFLACFAPIAMAARAGVRSATGEQIAAAWSLGASPAQVVRHVVLPAALPEILTGLRI 258

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN-- 570
           A G  W   + +E+ +       T GLG  +  ++       VV+G++++       +  
Sbjct: 259 AIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDVVVMGIVLIGAIAWGFDLA 312

Query: 571 -RFLWHPLYLYGTR 583
            R L      +  R
Sbjct: 313 MRVLERRWVPWKGR 326


>gi|29831961|ref|NP_826595.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29609078|dbj|BAC73130.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 290

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++          +LP     +  R      + L    + A  A  SR    ++  
Sbjct: 72  PAPWTVLRTTGQLWSAGTLPTDVLTSLERAAYGFALGLSAGVLLALTAGLSRVGEALIDG 131

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + + ++IP LG +   +++       K+    +     I+         +++ +L  I 
Sbjct: 132 TVQLNRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYIPIY--------LNLHAALSGID 183

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E++    LS  +    + VP ++PG    + + ++G W  +V  E I         
Sbjct: 184 HRFVELAEVQGLSRLRFIREIVVPGALPGFFVGLRLGVTGSWLSLVVLEQI------NAT 237

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            G+G  +  A        IL  +L         D   +L  R ++ W
Sbjct: 238 SGLGYMMFQAQNYGRTDIILVGLLIYGVFGLASDSAVRLFERRVLSW 284



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 13/226 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G        +           +      ++ R      +     + + +  G      + 
Sbjct: 69  GAIPAPWTVLRTTGQLWSAGTLPTDVLTSLERAAYGFALGLSAGVLLALTAGLSRVGEAL 128

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I    QL  A P     PL +  +          +++++       I  N+ A  S   +
Sbjct: 129 IDGTVQLNRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYI----PIYLNLHAALSGIDH 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            F E+A    ++  R+ R I++PG  P +  G      G+W + +V E  +       T+
Sbjct: 185 RFVELAEVQGLSRLRFIREIVVPGALPGFFVGLRLGVTGSWLSLVVLEQIN------ATS 238

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           GLG  + ++   G    +++G+LI   F LA +   R     +  +
Sbjct: 239 GLGYMMFQAQNYGRTDIILVGLLIYGVFGLASDSAVRLFERRVLSW 284


>gi|297190524|ref|ZP_06907922.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197717838|gb|EDY61746.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 289

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 95/275 (34%), Gaps = 23/275 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG------ 365
            V +       ++    +   +    +R S +L+  W  V   +A    W          
Sbjct: 2   TVSQSAIKAAPVKVAGVDRRERPSPKERASRLLEQSWRPVALLLACFAVWWVTAAAELVE 61

Query: 366 -YIVNHFT-----YQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
            Y+V                IW    +T +  ++  +IA ++ +   + + +   +   +
Sbjct: 62  PYLVPSPGATLDVLTGKADYIWQHSWVTTYETLLGFLIAVVVGVFAAVIMVYSATVEKTL 121

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P        P     PL V  + +          L+ +    + ++ +++ G  A   +
Sbjct: 122 YPILLFAQVVPKIAIAPLFVVWLGFG----IAPKILIAVLIAFFPVVISMVTGLKAVDPE 177

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             +++S+   + W+ +  I +P   P+  +G   A   A   ++V E            G
Sbjct: 178 MLQLSSTMGASPWQTFVKIRMPASLPHLFSGLKVAVTLAVTGAVVGEFVG------ANEG 231

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG  I ++      P +  G+L+M    + L   +
Sbjct: 232 LGYVILQANGNLDTPMLFAGLLVMSLIGVVLFVLV 266



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 17/255 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ---ETTVPRDIVDIVPITLDVHSLPQY 64
           P   + R+    +  +A +L    +  +    +      VP     +  +T     + Q+
Sbjct: 26  PKERASRLLEQSWRPVALLLACFAVWWVTAAAELVEPYLVPSPGATLDVLTGKADYIWQH 85

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  TT   L   +I+++     A +   S  +   L PIL   Q +P +      VV+  
Sbjct: 86  SWVTTYETLLGFLIAVVVGVFAAVIMVYSATVEKTLYPILLFAQVVPKIAIAPLFVVWLG 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                K++ A L A F         +  SM   L  +  ++ ++S +   S WQ F  + 
Sbjct: 146 FGIAPKILIAVLIAFF--------PVVISMVTGLKAVDPEMLQLSSTMGASPWQTFVKIR 197

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P L   + ++++      V  E +   +      G+G  I  A    D   +   
Sbjct: 198 MPASLPHLFSGLKVAVTLAVTGAVVGEFVGANE------GLGYVILQANGNLDTPMLFAG 251

Query: 245 MLTMLGVIFLYDQLL 259
           +L M  +  +   L+
Sbjct: 252 LLVMSLIGVVLFVLV 266


>gi|237736979|ref|ZP_04567460.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420841|gb|EEO35888.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 526

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L ++++++L       L +  +++   ++ I + +Q+IP +  L F + +         
Sbjct: 25  TLISVLVAILIGVPMGILISHFKKINKTVMGIANTIQAIPSMALLGFLIPFLGIGV---- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + +IF +    +  +  + Y S+  I   + E +    L+  Q  + + +P ++P 
Sbjct: 81  ----MPSIFMVVLYSLLPIIKNTYTSIEGINPQMIEAAEGIGLTKLQILFKIQIPMALPV 136

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    +   G+G  +   I+  +   IL   +    +
Sbjct: 137 IMAGVRIS------AVTAVGLMTIAAF-VGAGGLGFLVFSGIRTANTYQILAGAIPACIL 189

Query: 252 IFLYDQ 257
               D 
Sbjct: 190 ALFIDW 195



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+   +I L    +   ++ +++A +I +P+GI I     I+  +   A  + A P+   
Sbjct: 9   QERAQIISLLVEHINLTLISVLVAILIGVPMGILISHFKKINKTVMGIANTIQAIPSMAL 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +        +    +++  +   I+ N             E A    +T  + 
Sbjct: 69  LGFLIPFLGIG----VMPSIFMVVLYSLLPIIKNTYTSIEGINPQMIEAAEGIGLTKLQI 124

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +P   P  + G   +   A     ++     G       GLG  +       +  
Sbjct: 125 LFKIQIPMALPVIMAGVRISAVTAVGLMTIAAFVGAG-------GLGFLVFSGIRTANTY 177

Query: 554 EVVLGVLIMCCFVLALN 570
           +++ G +  C   L ++
Sbjct: 178 QILAGAIPACILALFID 194


>gi|162449594|ref|YP_001611961.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161160176|emb|CAN91481.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 260

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L FV  + +    L   +    P  +        +   L  +   + +R L  + + ++
Sbjct: 21  VLLFVAWLVVCRYELANTRILVPPLAVWKAASALHESGDLWAHLRASLVRDLLGLALGIV 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L A SR    +  P     + + +  ++    V+            E A I  
Sbjct: 81  AGGAVGGLLAVSRTADKLFSPSFHAAKQVALFAWIPLMSVWLGVG--------EQAKIAF 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + +  + Y+ + ++  +  EV+R  R S WQ    + +P + P L   +   + 
Sbjct: 133 IALSAFYPVVVNTYEGVRSVGVEHIEVARVLRFSRWQTLRKVILPSAAPSLFAGVHQGLI 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E +     + P PGIGS +    +   +  +L  ++    V F  + L
Sbjct: 193 YAWLGTLGAEYL-----LEPAPGIGSLMVDGRERFAMDVVLVGLIVSGLVGFGLNAL 244



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 74/245 (30%), Gaps = 15/245 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITM 387
           +    R   +L +  F     V       +   +     +       +   +      ++
Sbjct: 9   IQPRLRRGLVLPVLLFVAWLVVCRYELANTRILVPPLAVWKAASALHESGDLWAHLRASL 68

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R ++ + +  +    VG  +           P            + PL+   +      
Sbjct: 69  VRDLLGLALGIVAGGAVGGLLAVSRTADKLFSPSFHAAKQVALFAWIPLMSVWLGVG--- 125

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                   +     + ++ N   G  +   +  EVA     + W+  R +ILP   P   
Sbjct: 126 -EQAKIAFIALSAFYPVVVNTYEGVRSVGVEHIEVARVLRFSRWQTLRKVILPSAAPSLF 184

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       AW  ++ +E            G+G+ + +  E+ +   V++G+++      
Sbjct: 185 AGVHQGLIYAWLGTLGAEYLL-----EPAPGIGSLMVDGRERFAMDVVLVGLIVSGLVGF 239

Query: 568 ALNRF 572
            LN  
Sbjct: 240 GLNAL 244


>gi|225165790|ref|ZP_03727576.1| ABC transporter permease protein [Opitutaceae bacterium TAV2]
 gi|224799966|gb|EEG18409.1| ABC transporter permease protein [Opitutaceae bacterium TAV2]
          Length = 365

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 11/227 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV-VVLIIIAS 398
              +L + W  +     +       G      T++D L +I L     FR+ V+  +  +
Sbjct: 124 AGALLVVIWEILTAKAGVLPMPYFPGPDRILSTFRDDLPLIGLSAGHSFRLLVIGYVAGA 183

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +     G+ +G+  H+    QP  + L   PA  + PL +              + L+  
Sbjct: 184 LSGFLAGLSLGWSRHVRYWGQPVLKTLGPIPATAWIPLAMVLFPTSFT----AGAFLVAL 239

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
            + + +     +G ++      +VA     T  +    I +P   P    G       ++
Sbjct: 240 ASFFPMTVLTSSGIASVRQSHLDVARMLGATQRQLIWRIAIPSALPTIFVGLFMGLSASF 299

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +V+E+           GLG YI  +     + +V   ++IM  F
Sbjct: 300 LTLVVAEMVG------VKAGLGWYITWAQNYMEYYKVYAALVIMSLF 340



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 86/239 (35%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              V++  I+      +     P     +     D+  +   A  +   ++   V   L 
Sbjct: 126 ALLVVIWEILTAKAGVLPMPYFPGPDRILSTFRDDLPLIGLSAGHSFRLLVIGYVAGALS 185

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       SR +     P+L  +  IP   ++   +V F   +         A  F +
Sbjct: 186 GFLAGLSLGWSRHVRYWGQPVLKTLGPIPATAWIPLAMVLFPTSFT--------AGAFLV 237

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + MT      + ++ +   +V+R    +  Q  W + +P ++P +   + M +S 
Sbjct: 238 ALASFFPMTVLTSSGIASVRQSHLDVARMLGATQRQLIWRIAIPSALPTIFVGLFMGLSA 297

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +  +V +EM+ V        G+G YI  A    +   +  A++ M          LF+
Sbjct: 298 SFLTLVVAEMVGVKA------GLGWYITWAQNYMEYYKVYAALVIMSLFFSGIMTALFK 350


>gi|72161905|ref|YP_289562.1| taurine ABC transporter permease [Thermobifida fusca YX]
 gi|71915637|gb|AAZ55539.1| taurine ABC transporter, permease protein [Thermobifida fusca YX]
          Length = 288

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 24/265 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              RFH       L           + W+     VA    W  +     H  ++  +   
Sbjct: 26  TRSRFHLSAAARSLGLRALAVGGFLLLWWA----VARAEIWPPVILPPPHAVWEQAVATT 81

Query: 381 WLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             G            +M R++      +   I +G+ IG  P +   + P    + A P 
Sbjct: 82  TEGFSGSTLPEHLWASMRRILTGSGYGTAGGILLGLLIGLVPALRVMLGPLISFVRALPP 141

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             +  L+V         P +W   L+I  +   +             D+   A S     
Sbjct: 142 LAYLSLLVIWFGINE-EPKIW---LLIIASLPPVAVATADAVRNVGPDYLHAARSLGARS 197

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           WR   +I+LP   P  +TG   A G A+ + + +E  +         G+G  I E+    
Sbjct: 198 WRLPLWIVLPHALPEVITGVRIAVGVAYTSVVAAETVNG------LPGIGGMIREAQRFN 251

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWH 575
               V+LG+ ++    L ++  L  
Sbjct: 252 QTDIVILGLFVIGLSGLLIDGILQR 276



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 91/226 (40%), Gaps = 17/226 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
             V          +LP++   +  R+L+          +   L      L ++L P++  
Sbjct: 76  QAVATTTEGFSGSTLPEHLWASMRRILTGSGYGTAGGILLGLLIGLVPALRVMLGPLISF 135

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++++P L +L+  V++F           E   I+ +  + +  +  +   ++ N+  D  
Sbjct: 136 VRALPPLAYLSLLVIWFGIN--------EEPKIWLLIIASLPPVAVATADAVRNVGPDYL 187

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             +RS     W+   ++ +P ++P ++  + +++   +  VVA+E +        LPGIG
Sbjct: 188 HAARSLGARSWRLPLWIVLPHALPEVITGVRIAVGVAYTSVVAAETV------NGLPGIG 241

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             I  A +      ++  +  +     L D   Q + R +  W  +
Sbjct: 242 GMIREAQRFNQTDIVILGLFVIGLSGLLIDGILQRIDRILAPWRGR 287


>gi|148253391|ref|YP_001237976.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405564|gb|ABQ34070.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 272

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 78/253 (30%), Gaps = 22/253 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLG 383
             P+   ++           + W   +  + I  A    G +         DV    W  
Sbjct: 6   SLPKVGNKVRQLTVPKADGLLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKL 65

Query: 384 C----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                      ++ +R  +  +I   I    G+  G     +       Q++   P    
Sbjct: 66  LWSGELGRNIWVSFWRASIGFLIGGGIGFAFGLANGLSQLSAKLTDTTLQMVRNVPHLAL 125

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PLV+                L+  G  + +  N + G         E+   + +T    
Sbjct: 126 IPLVILWFGI----DESAKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDSEL 181

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R +I PG  P    G   A G  W   IV+E  +       ++GLG    ++ E     
Sbjct: 182 FRRVIFPGALPSIFVGLRFALGIMWLTLIVAETIA------ASSGLGYMAMQAREFMQID 235

Query: 554 EVVLGVLIMCCFV 566
            VVL +LI     
Sbjct: 236 VVVLSILIYALLG 248



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 90/260 (34%), Gaps = 17/260 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +  L   ++        L   +    P D+       L    L +    +  R   
Sbjct: 25  LLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASI 84

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I     F +      S+    +    L +++++P L  +   +++F           
Sbjct: 85  GFLIGGGIGFAFGLANGLSQLSAKLTDTTLQMVRNVPHLALIPLVILWFGID-------- 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  +    +  +   L E+ R + ++  + F  +  P ++P +  
Sbjct: 137 ESAKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDSELFRRVIFPGALPSIFV 196

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          G+G     A +   +  ++ ++L    +  +
Sbjct: 197 GLRFALGIMWLTLIVAETIAASS------GLGYMAMQAREFMQIDVVVLSILIYALLGKV 250

Query: 255 YD---QLLFRPMIVWSNKFR 271
            D   + L R  + W   F 
Sbjct: 251 ADSASRALERLTLSWHPAFS 270


>gi|289673949|ref|ZP_06494839.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
          Length = 207

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 13/187 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68
           +R    +  L+   ++I ++ +++        +   P +IV  +   L   +L ++ S +
Sbjct: 30  QRYRTPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISAS 88

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            LR+LS   I      V+A     SR     L P    ++SIP L ++   +++      
Sbjct: 89  LLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG-- 146

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E + I  I     + +  +   ++  I R L EV + + LS ++    + +P +
Sbjct: 147 ------ETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAA 200

Query: 189 MPGLVWN 195
           +PGL   
Sbjct: 201 LPGLFTG 207



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++  +   
Sbjct: 87  ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 146

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+  G  + +  N +A          EV   + ++ +R  R I+LP   P
Sbjct: 147 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 202

Query: 505 YYVTG 509
              TG
Sbjct: 203 GLFTG 207


>gi|168184712|ref|ZP_02619376.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           Bf]
 gi|237794978|ref|YP_002862530.1| glycine betaine/L-proline ABC transporter permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           Ba4 str. 657]
 gi|182672213|gb|EDT84174.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           Bf]
 gi|229263173|gb|ACQ54206.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           Ba4 str. 657]
          Length = 527

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +           L ++++++        +  K+++L   ++   ++ Q+IP L  
Sbjct: 10  LKKSQILSLLVEHVELTLISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAI 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L F +                 AI  +    +  +  + Y  + NI  D+ E ++   ++
Sbjct: 70  LGFLIPLIGIG--------SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMT 121

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P +MP ++  + ++       V A  ++ +    I   G+G  +   I+ 
Sbjct: 122 NTQTLKLIKIPLAMPIIMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQT 174

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D   IL+  +    +  + D +
Sbjct: 175 VDNNLILFGAIPAAILALVIDWV 197



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A  I +P+GI I     ++  +  FA L  A P+      ++  +       + 
Sbjct: 27  LISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----SA 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALVID 195


>gi|161523068|ref|YP_001585997.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189348106|ref|YP_001941302.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160346621|gb|ABX19705.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189338244|dbj|BAG47312.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 292

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 90/238 (37%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +    ++  ++            +      +    L      +   +L    + +L 
Sbjct: 50  FVLIAAWELVARVVANDLLVPTFSATLAAFVDGIVSGELLVKTGISMSVLLRGYALGVLL 109

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            FV  ++A  +R    +L  +  +   +P +  L   +++F             + +F +
Sbjct: 110 AFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTG--------SLLFVL 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  +MY     +P  L    R++ L+G ++   + VP ++P ++  + +  + 
Sbjct: 162 VHAVLWPLAVNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPSILSGLRVGWAF 221

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++          G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 222 AWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 277



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 92/289 (31%), Gaps = 21/289 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVN 369
           + V    R         P +  +      V  + D  WF        +  AW+ +  +V 
Sbjct: 5   DPVLPPVRAEYERELEPPRDAERAAPLPLVRRVADAAWFRRAAIAFVLIAAWELVARVVA 64

Query: 370 H----FTYQDVLYVIWLGCITMFRVVVLIIIASII--WIPVGIWIG--------FRPHIS 415
           +     T+   L     G ++   +V   I  S++     +G+ +               
Sbjct: 65  NDLLVPTFSATLAAFVDGIVSGELLVKTGISMSVLLRGYALGVLLAFVLTSVAVSTRFGR 124

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             +     +    P+    P+ +        +    L  +++    W +  N+  G    
Sbjct: 125 DLLTMLTSMFNPLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLAVNMYTGFVGV 180

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P   +    ++ +TG R    I++P   P  ++G       AW   I +E+         
Sbjct: 181 PATLRMAGRNYGLTGLRQVLLILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAG 238

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             GLG YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 239 QGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 287


>gi|302530585|ref|ZP_07282927.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
 gi|302439480|gb|EFL11296.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
          Length = 249

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++   ++ ++I+  I +P G+ +G  P +    +   + L   P+    PLV+  V  
Sbjct: 49  IASVLAWMIALLISIAIAVPAGLLLGSIPWLRDATKAIVEFLRPIPSVALIPLVLIVVGG 108

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L ++   W ILFN I   +       E A ++     R    + LP   
Sbjct: 109 GP----EAKITLAVYAAVWPILFNTIYALAEIDPLLLETARTYGTPRARVLTSVALPHAA 164

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK-GSFPEVVLGVLIM 562
           P+  TG   +   +    I +E  +   +     G+G ++ E++   G    V+ G +I 
Sbjct: 165 PFVFTGIRLSAAISLILVISTEFLAGAKL-----GIGQFVLEASSGPGRMDLVLAGTVIA 219

Query: 563 CCFVLALNRFLWH---PLYLYG 581
                 +N  L      L+ + 
Sbjct: 220 GILGFLVNEGLERLGHRLFRWS 241



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 89/243 (36%), Gaps = 15/243 (6%)

Query: 21  DLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            LL F+L+   ++   L    +   P  +   +   L      +    + L  + A++IS
Sbjct: 3   GLLGFLLIWEAVVRAGLIDQNDLPPPSVVFARIGELLGDVEFVRDVIASVLAWMIALLIS 62

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +        L      L      I++ ++ IP +  +   ++           G   A I
Sbjct: 63  IAIAVPAGLLLGSIPWLRDATKAIVEFLRPIPSVALIPLVLIVVG--------GGPEAKI 114

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
                + VW + F+   +L  I   L E +R++     +    + +P + P +   + +S
Sbjct: 115 TLAVYAAVWPILFNTIYALAEIDPLLLETARTYGTPRARVLTSVALPHAAPFVFTGIRLS 174

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE-QDLLAILYAMLTMLGVIFLYDQL 258
            +     V+++E +          GIG ++  A      +  +L   +    + FL ++ 
Sbjct: 175 AAISLILVISTEFLAGAKL-----GIGQFVLEASSGPGRMDLVLAGTVIAGILGFLVNEG 229

Query: 259 LFR 261
           L R
Sbjct: 230 LER 232


>gi|223039626|ref|ZP_03609913.1| binding-protein-dependent transport systems inner membrane
           component [Campylobacter rectus RM3267]
 gi|222879197|gb|EEF14291.1| binding-protein-dependent transport systems inner membrane
           component [Campylobacter rectus RM3267]
          Length = 249

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 91/249 (36%), Gaps = 15/249 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R IF     +LA   +  ++  + +        P   +  +        L  +   +  R
Sbjct: 2   REIFKKSILILAIFAIWQVVCELEIFTPYILPSPAATLKTMYGMSLSGELATHTIISFKR 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     +S     V   +AA   ++ +    IL+  ++IP L  +   V++F      K+
Sbjct: 62  IFVGYALSFALALVLGGIAALLPKISVYYEWILEFFRNIPPLSLIAILVLWFGINETPKI 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   LA+ F         M  S+ + L +    L EV + F  S ++ F+ + +  ++  
Sbjct: 122 IIIILASFF--------PMFLSIQKGLTSCDIKLIEVGKIFGFSKFEIFYKIILKSALKD 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M +        ++ +EMI          G+G  I  A +      I   + T+   
Sbjct: 174 IFVGMRIGFGYAMRAIIGAEMIAASS------GLGYLILDAEELSRADRIFVGIFTIGVC 227

Query: 252 IFLYDQLLF 260
             L D+L  
Sbjct: 228 GVLIDRLFL 236



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I       +   +       +     I+  R+ V   ++  + + +G      P IS  
Sbjct: 30  YILPSPAATLKTMYGMSLSGELATHTIISFKRIFVGYALSFALALVLGGIAALLPKISVY 89

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +   +     P      ++V               +++I  + + +  ++  G ++   
Sbjct: 90  YEWILEFFRNIPPLSLIAILVLWFGI----NETPKIIIIILASFFPMFLSIQKGLTSCDI 145

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              EV   F  + +  +  IIL         G     G A  A I +E+ +       ++
Sbjct: 146 KLIEVGKIFGFSKFEIFYKIILKSALKDIFVGMRIGFGYAMRAIIGAEMIA------ASS 199

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  I ++ E      + +G+  +    + ++R  
Sbjct: 200 GLGYLILDAEELSRADRIFVGIFTIGVCGVLIDRLF 235


>gi|13473831|ref|NP_105399.1| aliphatic sulfonate transport membrane component [Mesorhizobium
           loti MAFF303099]
 gi|14024582|dbj|BAB51185.1| aliphatic sulfonate transport membrane component [Mesorhizobium
           loti MAFF303099]
          Length = 258

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 73/239 (30%), Gaps = 22/239 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------------LYVIWLGCITMFRVVVL 393
           I W   V  +A   A    G +  +                    +I    ++  R +  
Sbjct: 12  IGWVLPVLVIAGWEAASRAGLVPANVLPAPSAVAEAFWRLTLSGELIRNIGVSTARALAG 71

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             I   I   +G+  G             Q++   P     PLV+               
Sbjct: 72  FGIGGSIGFALGLANGLSRLSRGLTDTTLQMVRNIPHLALIPLVILWFGI----DEEAKL 127

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+  G  + I  N + G  +      E+   + +     +  +ILPG  P    G   A
Sbjct: 128 FLVALGVFFPIYVNTLLGIQSVDPQLVEMGRVYGMDRRALFFRVILPGALPAIFVGLRYA 187

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            G  W   IV+E  S       ++GLG    ++ E      VVL +LI        +  
Sbjct: 188 LGIMWLTLIVAETIS------ASSGLGYMAMQAREFLLIDVVVLSILIYALLGKLADSL 240



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 21/268 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIG----IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            S R+  N    +  VLVI          L        P  + +          L +   
Sbjct: 3   FSARLHANAIGWVLPVLVIAGWEAASRAGLVPANVLPAPSAVAEAFWRLTLSGELIRNIG 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T R L+   I     F        SR    +    L ++++IP L  +   +++F   
Sbjct: 63  VSTARALAGFGIGGSIGFALGLANGLSRLSRGLTDTTLQMVRNIPHLALIPLVILWFGID 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E A +F +     + +  +    + ++   L E+ R + +     F+ + +P
Sbjct: 123 --------EEAKLFLVALGVFFPIYVNTLLGIQSVDPQLVEMGRVYGMDRRALFFRVILP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +   +  ++   W  ++ +E I          G+G     A +   +  ++ ++L
Sbjct: 175 GALPAIFVGLRYALGIMWLTLIVAETISASS------GLGYMAMQAREFLLIDVVVLSIL 228

Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKFR 271
               +  L D   +LL R  + W   F+
Sbjct: 229 IYALLGKLADSLARLLERLSLGWHPAFQ 256


>gi|170735650|ref|YP_001776910.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169817838|gb|ACA92420.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 365

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 88/289 (30%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++  + F   +  +  L      +         +L   +     L      + 
Sbjct: 71  RIVGFSDWAYTDTFGTAAWTIAALLLVAATLGHRVAAPRTRLARVRPAGPWLVALPLVLA 130

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 131 AWEIVTAKTGWLPTPFFAPPQALIEVYADDWPRLAGSATNTLKLLALGFAYGVTVGFAVG 190

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 191 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPSSYS----AAAFLIALATGFPVA 246

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 247 VLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 306

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 307 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 349



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 94/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A+ T  
Sbjct: 114 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYADDWPRLAGSATNTLK 173

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 174 LLALGFAYGVTVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 226

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  +  + +    +  + ++ +   +V+R+   +       + +P ++P
Sbjct: 227 -PSSYSAAAFLIALATGFPVAVLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALP 285

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 286 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 339

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 340 LFSGLIALLF 349


>gi|304392280|ref|ZP_07374222.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130]
 gi|303296509|gb|EFL90867.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130]
          Length = 278

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +LS+  + +          A   R   +  PILD+MQ++P   +L   ++
Sbjct: 90  WEETTETLTLVLSSAFLCMAIGVPIGIYLAHHPRAFAIARPILDLMQTLPTFVYLIPAII 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               +   P  L E   +F  S WQ   
Sbjct: 150 FFG---IGMVPGLVATVIFVIPAP-----IRLTQLGIAATPAALREAGTAFGASSWQMLR 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+++P ++  +  ++      VV + ++          G+G  I  A+   +    
Sbjct: 202 KVELPYALPQIMAGLTQTIMLSLSMVVIAALV-------GADGLGIPIVRALNTVNTSLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ +  L D+LL
Sbjct: 255 FEAGFVIVVLAILLDRLL 272



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +   I +P+GI++   P   +  +P   L+   P  V+    +       
Sbjct: 96  TLTLVLSSAFLCMAIGVPIGIYLAHHPRAFAIARPILDLMQTLPTFVYLIPAIIFFGIGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   + +I      I      G +A P   +E  ++F  + W+  R + LP   P 
Sbjct: 156 VPGLVATVIFVIPA---PIRL-TQLGIAATPAALREAGTAFGASSWQMLRKVELPYALPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  I  +    +         ++   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------ADGLGIPIVRALNTVNTSLGFEAGFVIVVL 264

Query: 566 VLALNRFL 573
            + L+R L
Sbjct: 265 AILLDRLL 272


>gi|311108165|ref|YP_003981018.1| binding-protein-dependent transporter inner membrane component
           family protein 56 [Achromobacter xylosoxidans A8]
 gi|310762854|gb|ADP18303.1| binding-protein-dependent transport system inner membrane component
           family protein 56 [Achromobacter xylosoxidans A8]
          Length = 264

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +I  +  G+W+G  P  S+ + P+ +   + P  +  P+       
Sbjct: 65  GVTLTETVLAFFIGTIAGLAFGLWLGLSPGASAILDPYIKAANSMPRVILAPIFGMWFGL 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G         + A        +  R++ LP   
Sbjct: 125 GIWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGARRRQLLRHVYLPSAT 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++ 
Sbjct: 181 SWVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIIVLT 234

Query: 564 CFVLALNRFL 573
            F L L+  +
Sbjct: 235 AFALVLDAVV 244



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + A  I  +    +      S     +L P +    S+P +       ++F
Sbjct: 63  HLGVTLTETVLAFFIGTIAGLAFGLWLGLSPGASAILDPYIKAANSMPRVILAPIFGMWF 122

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   L + +R       Q   ++
Sbjct: 123 GLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLDNARMLGARRRQLLRHV 174

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 175 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGYLILQAEGTFDVNTVFA 228

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  +
Sbjct: 229 GIIVLTAFALVLDAVVGIGEKRLMKWQPR 257


>gi|229030467|ref|ZP_04186507.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1271]
 gi|228730906|gb|EEL81846.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1271]
          Length = 278

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  +++ L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHLEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              I      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLIIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|218528428|ref|YP_002419244.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218520731|gb|ACK81316.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 279

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 91/242 (37%), Gaps = 17/242 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +   L   +    P  I   +        L  +   T +R+            +   L
Sbjct: 46  AAVAAGLASGRLLPPPSRIAAALWTLAASGELWTHVEATLIRVGLGFAFGAGAGILAGAL 105

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A    L  ++ P L  ++++P L ++   +++F  L   KV    +   F ++      
Sbjct: 106 TATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGILETPKVALIAVGVFFPVY------ 159

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
               +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA
Sbjct: 160 --IGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLPATLTALRTGLGLGFLFVVA 217

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +E++   +      G+G  +    +      IL A+++   V    D     L  P++ W
Sbjct: 218 AELMGASE------GLGYLLLDGQQFSKPDQILAAIISFAVVGKAADAALVALTSPLVRW 271

Query: 267 SN 268
            +
Sbjct: 272 QD 273



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV +     +   I  G      P +   + P  Q L A P+  + PL +      
Sbjct: 83  ATLIRVGLGFAFGAGAGILAGALTATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGIL 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V    ++      EV   F ++     R I+LP + P
Sbjct: 143 ET----PKVALIAVGVFFPVYIGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T   T  G  +   + +E+         + GLG  + +  +     +++  ++    
Sbjct: 199 ATLTALRTGLGLGFLFVVAAELMG------ASEGLGYLLLDGQQFSKPDQILAAIISFAV 252

Query: 565 FVLALN 570
              A +
Sbjct: 253 VGKAAD 258


>gi|297162870|gb|ADI12582.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces bingchenggensis BCW-1]
          Length = 285

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 23/242 (9%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------ITMFRVVVLIIIASIIW 401
           V  V    +W +    +   +   V  V+W              ++ R     +I + + 
Sbjct: 47  VLAVWQLASWNTWMDPLLLPSPGAVARVLWDSAGDGTLVTDLSASIERWASGFLIGASLG 106

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G  +G        +    Q+L   P +   PL++  +            +L+  G+ 
Sbjct: 107 LLLGSLVGLSVLSERLLDTSVQMLRTVPVSGLSPLLIVWLGL----DEAPKVVLVAVGSF 162

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N   G         EV   F        R I+LP   P  + G   A G AW   
Sbjct: 163 FPVYINTFGGIRNVDRKLVEVGQVFQWNRPTVLRRIVLPAALPEILNGIRYALGVAWVLL 222

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLY 578
           +++E+         T+GLG  + +  E      V+  +L+      A++  +      L 
Sbjct: 223 VLAELLG------ATSGLGFMLNQGRELSRVDVVIAALLVFAVAGKAVDLLVRAAERRLL 276

Query: 579 LY 580
            +
Sbjct: 277 RW 278



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 89/230 (38%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +  ++  +    +L    S +  R  S  +I      +  +L   S     +L 
Sbjct: 65  LPSPGAVARVLWDSAGDGTLVTDLSASIERWASGFLIGASLGLLLGSLVGLSVLSERLLD 124

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P+ G     +V+       KV+   + + F ++         + +  + N+
Sbjct: 125 TSVQMLRTVPVSGLSPLLIVWLGLDEAPKVVLVAVGSFFPVY--------INTFGGIRNV 176

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L EV + F+ +       + +P ++P ++  +  ++   W  +V +E++        
Sbjct: 177 DRKLVEVGQVFQWNRPTVLRRIVLPAALPEILNGIRYALGVAWVLLVLAELLG------A 230

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
             G+G  +    +   +  ++ A+L         D L+    R ++ W +
Sbjct: 231 TSGLGFMLNQGRELSRVDVVIAALLVFAVAGKAVDLLVRAAERRLLRWRD 280


>gi|148560547|ref|YP_001259451.1| putative glycine betaine/L-proline ABC transporter permease
           [Brucella ovis ATCC 25840]
 gi|225628017|ref|ZP_03786053.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|254702297|ref|ZP_05164125.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella suis bv. 5 str. 513]
 gi|254710612|ref|ZP_05172423.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella pinnipedialis B2/94]
 gi|254714795|ref|ZP_05176606.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M644/93/1]
 gi|254717856|ref|ZP_05179667.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M13/05/1]
 gi|256032106|ref|ZP_05445720.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella pinnipedialis M292/94/1]
 gi|256369995|ref|YP_003107506.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella microti CCM 4915]
 gi|260169241|ref|ZP_05756052.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella sp. F5/99]
 gi|261219703|ref|ZP_05933984.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261318185|ref|ZP_05957382.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261322592|ref|ZP_05961789.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261752865|ref|ZP_05996574.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261758754|ref|ZP_06002463.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265989216|ref|ZP_06101773.1| glycine betaine/L-proline ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|294852895|ref|ZP_06793568.1| choline ABC transporter [Brucella sp. NVSL 07-0026]
 gi|306843073|ref|ZP_07475696.1| choline ABC transporter, permease protein [Brucella sp. BO2]
 gi|306844580|ref|ZP_07477167.1| choline ABC transporter, permease protein [Brucella sp. BO1]
 gi|148371804|gb|ABQ61783.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ovis ATCC 25840]
 gi|225617180|gb|EEH14226.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|256000158|gb|ACU48557.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Brucella microti CCM 4915]
 gi|260924792|gb|EEX91360.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261295282|gb|EEX98778.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261297408|gb|EEY00905.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261738738|gb|EEY26734.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261742618|gb|EEY30544.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|264661413|gb|EEZ31674.1| glycine betaine/L-proline ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|294821484|gb|EFG38483.1| choline ABC transporter [Brucella sp. NVSL 07-0026]
 gi|306275024|gb|EFM56787.1| choline ABC transporter, permease protein [Brucella sp. BO1]
 gi|306286752|gb|EFM58302.1| choline ABC transporter, permease protein [Brucella sp. BO2]
          Length = 278

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|148256186|ref|YP_001240771.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408359|gb|ABQ36865.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 286

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +   L    L Q+A  + LR+L    +              SRR+   + 
Sbjct: 68  LPRPADVLHTLNEMLASGELAQHAGISLLRVLLGFAVGAGAGLALGAAMGLSRRVDDHVR 127

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+   +  +P L ++   ++             E   I  I  +    +  +    + N+
Sbjct: 128 PLFTAIAQVPALAWIPLAMLLLGIG--------ETLKIVVIAKAAFVPVAMNTSAGIANV 179

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR L EV  +FR S  Q   ++ +P ++P +   +   ++  W  +V+ E++   +    
Sbjct: 180 PRALVEVGETFRFSPLQMLRHVVLPGAVPPIFTGLRYGLTHAWIALVSVELLASSE---- 235

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  +    +   L  +L AM+ +  + F  D+LL
Sbjct: 236 --GLGYLLVWGRQMFWLDTVLVAMIVIGIIGFASDKLL 271



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             I++ RV++   + +   + +G  +G    +   ++P    +A  PA  + PL +  + 
Sbjct: 91  AGISLLRVLLGFAVGAGAGLALGAAMGLSRRVDDHVRPLFTAIAQVPALAWIPLAMLLLG 150

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      +++       +  N  AG +  P    EV  +F  +  +  R+++LPG 
Sbjct: 151 IGET----LKIVVIAKAAFVPVAMNTSAGIANVPRALVEVGETFRFSPLQMLRHVVLPGA 206

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   TG       AW A +  E+ +       + GLG  +    +      V++ ++++
Sbjct: 207 VPPIFTGLRYGLTHAWIALVSVELLA------SSEGLGYLLVWGRQMFWLDTVLVAMIVI 260

Query: 563 CCFVLALNRFL 573
                A ++ L
Sbjct: 261 GIIGFASDKLL 271


>gi|260463235|ref|ZP_05811437.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259031085|gb|EEW32359.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 228

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V  +       ++     +  R    + +   + + + +  G      + I    Q+  
Sbjct: 16  VVTGYELLADGSLLPHLLASAGRAYAGLFLGVTVGVILALLSGLTRSGEALIDGVVQIKR 75

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PLV+  +             L+       +  N  A          E+A + 
Sbjct: 76  AVPTLALIPLVIIWLGIGEA----MKIFLIFTAVLVPVYINTHAAIKGIDIGHVELARTL 131

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T   + R + LPG  P        A    W   +V E+ +        TG+G  +  +
Sbjct: 132 GLTRSEFIRKVALPGALPGLFVSLRLAVTICWTTLVVLELIN------TQTGIGYLMNRA 185

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + G    +V+G+ I     L  +  +
Sbjct: 186 RDWGQTDVIVVGIFIYAILGLVSDALV 212



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 88/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T P   V      L   SL  +   +  R  + + + +    + A L+  +R    ++ 
Sbjct: 9   LTAPSTAVVTGYELLADGSLLPHLLASAGRAYAGLFLGVTVGVILALLSGLTRSGEALID 68

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ I +++P L  +   +++            E   IF IFT+ +  +  + + ++  I
Sbjct: 69  GVVQIKRAVPTLALIPLVIIWLGIG--------EAMKIFLIFTAVLVPVYINTHAAIKGI 120

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R+  L+  +    + +P ++PGL  ++ ++++  W  +V  E+I        
Sbjct: 121 DIGHVELARTLGLTRSEFIRKVALPGALPGLFVSLRLAVTICWTTLVVLELI------NT 174

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  +  A        I+  +     +  + D L+
Sbjct: 175 QTGIGYLMNRARDWGQTDVIVVGIFIYAILGLVSDALV 212


>gi|221066157|ref|ZP_03542262.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220711180|gb|EED66548.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 281

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 17/269 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
            +L    + R+ P +  +    L            +    P D++       +   L  +
Sbjct: 24  ELLTRQFALRLLPWLLPVALIALWQAASAWGWLSTRVLPAPLDVLRAAWTLAESGELWTH 83

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R L+ + I      +   L    R    +L   + ++++IP L  +   +++F 
Sbjct: 84  VKVSAGRALAGLAIGGSLGLLLGLLTGSLRWAETLLDSTIQMVRNIPALALIPLVILWFG 143

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +F I  S  + +  + +  + N+   L E+ RS+ L+ WQ +  + 
Sbjct: 144 ID--------ESAKLFLISISVFFPIYLNTFHGIRNVDPGLIEMGRSYGLTRWQLYRDIV 195

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  ++  +  S+   W  ++ +E I          GIG     A +      +L  
Sbjct: 196 LPGALSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVG 249

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKF 270
           +L    +  L D     L R  + W   +
Sbjct: 250 ILLYAILGKLADVFARSLERWWLRWHPSY 278



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 87/259 (33%), Gaps = 22/259 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLG 383
                  +L    R   +  + W   V  +A+  A  + G++         DVL   W  
Sbjct: 15  PARPPVPRLELLTRQFALRLLPWLLPVALIALWQAASAWGWLSTRVLPAPLDVLRAAWTL 74

Query: 384 C----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                      ++  R +  + I   + + +G+  G      + +    Q++   PA   
Sbjct: 75  AESGELWTHVKVSAGRALAGLAIGGSLGLLLGLLTGSLRWAETLLDSTIQMVRNIPALAL 134

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PLV+                L+     + I  N   G         E+  S+ +T W+ 
Sbjct: 135 IPLVILWFGI----DESAKLFLISISVFFPIYLNTFHGIRNVDPGLIEMGRSYGLTRWQL 190

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R I+LPG     + G   + G  W   IV+E  S         G+G     + E     
Sbjct: 191 YRDIVLPGALSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTD 244

Query: 554 EVVLGVLIMCCFVLALNRF 572
            V++G+L+        + F
Sbjct: 245 VVLVGILLYAILGKLADVF 263


>gi|13475807|ref|NP_107377.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026566|dbj|BAB53163.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 257

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                + +      +  +    ++           IT+   V+  ++ + + +  G+W+G
Sbjct: 25  VAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAITLTETVLGYLVGTALGVAAGVWLG 84

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +  + PF + L A P  V  P+ V  +     +       L+ F T     FN +
Sbjct: 85  LSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF----FNAM 140

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G                       R++  P    + ++   T+ G A   +I+ E    
Sbjct: 141 QGVREVNPVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG- 199

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 + GLG  IA++        V  G+LI+  FVL ++  L
Sbjct: 200 -----SSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSIL 238



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DI+  V   +   S  ++ + T    +   ++              SR    +L P
Sbjct: 36  PAPLDILKQVASWVMDTSFYKHVAITLTETVLGYLVGTALGVAAGVWLGLSRSTARILDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R           ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVG---FAVVGA---IIGEYLGSS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  IA A    D + +   +L +   + + D +L
Sbjct: 202 AGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSIL 238


>gi|254423444|ref|ZP_05037162.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196190933|gb|EDX85897.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 295

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 87/205 (42%), Gaps = 15/205 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T  R+++ +V+  +       LA      G + +P++ ++  I  + ++ F +
Sbjct: 95  LLTAVVATLKRVMAGIVLGFIAALGVGGLACYFDLFGKLTLPVITLLAPIAPIAWIPFAI 154

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F             AAIF +F    + +T +   ++ N+ +     +R    +  Q  
Sbjct: 155 MAFGIGDG--------AAIFVVFIGIFFLLTLATVNAVNNVDQLYINTARVLGATRRQVM 206

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P  +P L + + ++    W  V+A+EM+ V        G+G+ + +  +  +   
Sbjct: 207 FKVVLPAVIPDLFFILRINFFAAWMAVLAAEMVGVNT------GLGAIVMVGRQMFNAKL 260

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           +   M  +  V +L D ++FR +  
Sbjct: 261 MFLGMAVIGVVGYLLD-VVFRQLQR 284



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 62/199 (31%), Gaps = 10/199 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     T+ RV+  I++  I  + VG    +         P   LLA      + P 
Sbjct: 93  FVLLTAVVATLKRVMAGIVLGFIAALGVGGLACYFDLFGKLTLPVITLLAPIAPIAWIPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +                ++  G  + +    +   +     +   A     T  +    
Sbjct: 153 AIMAFGIGDG----AAIFVVFIGIFFLLTLATVNAVNNVDQLYINTARVLGATRRQVMFK 208

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P            AW A + +E+          TGLGA +    +  +   + 
Sbjct: 209 VVLPAVIPDLFFILRINFFAAWMAVLAAEMVG------VNTGLGAIVMVGRQMFNAKLMF 262

Query: 557 LGVLIMCCFVLALNRFLWH 575
           LG+ ++      L+     
Sbjct: 263 LGMAVIGVVGYLLDVVFRQ 281


>gi|91779403|ref|YP_554611.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692063|gb|ABE35261.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 306

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 83/243 (34%), Gaps = 29/243 (11%)

Query: 350 CVVCGVAIGIAWQS---------IGYIVNHFTYQDVLYVIWLGC----------ITMFRV 390
            +V   A    W +         +        Y   ++V   G           I++ RV
Sbjct: 60  SLVTVAAFIGLWFAATNLHWIKPLFLPSPQAVYAKFIFVATEGFANSTLAQHTGISLLRV 119

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
               ++A +  IPVG+ +G          P  +     P   + PL++        +   
Sbjct: 120 FGAFLLACLSAIPVGVMMGVSRFARGAFDPPIEFYRPLPPLAYLPLIIIWFGIGEFSK-- 177

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              LL+       +     AG  +   +    A S   +  +   Y+IL    P   TG 
Sbjct: 178 --VLLIYLAIFAPLAIAARAGVRSVSIEQIHAAYSMGASRTQVVLYVILKSAMPEIFTGM 235

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G  W   + +E+ +       T+GLG  +  + E  +   V++G++++  F L  +
Sbjct: 236 RIGIGVGWTTLVAAEMVA------STSGLGFMVLNAAEFLASDVVIMGIIVIGFFALCFD 289

Query: 571 RFL 573
             +
Sbjct: 290 LLM 292



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 95/257 (36%), Gaps = 24/257 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSA 75
           + AF+ +       LH I+   +P                    +L Q+   + LR+  A
Sbjct: 64  VAAFIGLW-FAATNLHWIKPLFLPSPQAVYAKFIFVATEGFANSTLAQHTGISLLRVFGA 122

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +++ L       +   SR       P ++  + +P L +L   +++F           E
Sbjct: 123 FLLACLSAIPVGVMMGVSRFARGAFDPPIEFYRPLPPLAYLPLIIIWFGIG--------E 174

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + +  I+ +    +  +    + ++  +    + S   S  Q   Y+ +  +MP +   
Sbjct: 175 FSKVLLIYLAIFAPLAIAARAGVRSVSIEQIHAAYSMGASRTQVVLYVILKSAMPEIFTG 234

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           M + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +      +
Sbjct: 235 MRIGIGVGWTTLVAAEMVA------STSGLGFMVLNAAEFLASDVVIMGIIVIGFFALCF 288

Query: 256 DQL---LFRPMIVWSNK 269
           D L   + R ++ W  K
Sbjct: 289 DLLMRYIERVLVPWKGK 305


>gi|107026464|ref|YP_623975.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116692348|ref|YP_837881.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105895838|gb|ABF79002.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116650348|gb|ABK10988.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 365

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 89/289 (30%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++  + F   +  +  L      +    P    +L   +     L      + 
Sbjct: 71  RIVGFSDWAYTDTFGTAAWTIAALLLAAATLGHLVPATRTRLARVRPAGPWLVALPLVLA 130

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 131 AWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAANTLKLLALGFAYGVTVGFAVG 190

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 191 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPSSYS----AAAFLIALATGFPVA 246

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 247 VLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 306

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 307 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 349



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 94/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A+ T  
Sbjct: 114 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAANTLK 173

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 174 LLALGFAYGVTVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 226

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  +  + +    +  + ++ +   +V+R+   +       + +P ++P
Sbjct: 227 -PSSYSAAAFLIALATGFPVAVLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALP 285

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 286 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 339

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 340 LFSGLIALLF 349


>gi|209552095|ref|YP_002284011.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539688|gb|ACI59619.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 289

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 90/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   +V  +    L          D +  +       +LP     T   +     +  +
Sbjct: 46  ILTLAIVWQVYASYLDNPLLFPTLSDTIITLVDRFADGTLPARIWTTLQILFMGYAVGTV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA  +R     L  +  +   +P +  L   +++F             + IF 
Sbjct: 106 LAAFLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLG--------ASSLIFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     + R L  V  ++ L+G      + VP + P ++  + +  +
Sbjct: 158 LVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPSILTGLKIGWA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I       D+ A+   +LT++ +  + + L+F+
Sbjct: 218 FAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLDIPAVFAGLLTVIIIGLIVENLVFQ 275



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 6/190 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + +   + +++   + +        +  ++    +    PA    PL +       
Sbjct: 92  TLQILFMGYAVGTVLAAFLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLGA 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  +++    W +  N  +G        + V +++ +TG  +   I++P  FP 
Sbjct: 152 SS----LIFVLVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPS 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW   I +E+     +     GLG +I E+      P V  G+L +   
Sbjct: 208 ILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAVFAGLLTVIII 265

Query: 566 VLALNRFLWH 575
            L +   ++ 
Sbjct: 266 GLIVENLVFQ 275


>gi|119952261|ref|YP_950117.1| putative ABC transporter [Arthrobacter aurescens TC1]
 gi|119951391|gb|ABM10301.1| putative ABC transporter [Arthrobacter aurescens TC1]
          Length = 257

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 98/256 (38%), Gaps = 28/256 (10%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIG------YIVNHFTYQDVLYVIWLG-------CITMF 388
            +L+   + +   + +   W +        ++       +     W G         ++ 
Sbjct: 2   RLLNTLGYVLALPLILVAIWWASTLGETNFFVPTPALLAEAFAETWFGERILSDVLPSIG 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R+VV +  A II I  G+ IG    +    +P  +   A P  V  P+++  +       
Sbjct: 62  RLVVGVAAAIIIGIVAGLLIGSVKWLRDLTEPVLEFFRAIPPPVLVPVLMLLMGITDG-- 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 ++I G  W +L N I G  A      + A ++ I GW   +Y++LP   P  + 
Sbjct: 120 --MKVAVIISGCVWPVLLNTIEGVRAIDGVLSDSAHTYGIHGWARIKYLVLPSAGPQIMA 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G            ++SE+ +       ++GLG  I +     + PE+  G++++    +A
Sbjct: 178 GIRQCLSIGLILMVISEMFA------SSSGLGFTIVQFQRSFAIPEMWSGIVVLGLIGVA 231

Query: 569 LNRFLWHPLYLYGTRC 584
           L+      ++ +  R 
Sbjct: 232 LS-----FIFQWTERR 242



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 89/251 (35%), Gaps = 20/251 (7%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHS--LPQYASRTTLRMLSAMVI 78
           +LA  L++  I      G     VP   +             +      +  R++  +  
Sbjct: 10  VLALPLILVAIWWASTLGETNFFVPTPALLAEAFAETWFGERILSDVLPSIGRLVVGVAA 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   V   L    + L  +  P+L+  ++IP    +   ++        K        
Sbjct: 70  AIIIGIVAGLLIGSVKWLRDLTEPVLEFFRAIPPPVLVPVLMLLMGITDGMK-------- 121

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I +  VW +  +  + +  I   L + + ++ + GW +  YL +P + P ++  +  
Sbjct: 122 VAVIISGCVWPVLLNTIEGVRAIDGVLSDSAHTYGIHGWARIKYLVLPSAGPQIMAGIRQ 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S G   +V SEM           G+G  I    +   +  +   ++ +  +      +
Sbjct: 182 CLSIGLILMVISEMFASSS------GLGFTIVQFQRSFAIPEMWSGIVVLGLIGVALSFI 235

Query: 259 L---FRPMIVW 266
                R ++ W
Sbjct: 236 FQWTERRVLRW 246


>gi|297203733|ref|ZP_06921130.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197711782|gb|EDY55816.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 259

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 10/174 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+V    +A+++ +  G  IG    + +  +P  + L A P  V  P+++       
Sbjct: 60  SIWRLVAGYALAAVVGVAAGTVIGSYRRVRAVCEPVLEFLRAVPPPVLIPVIMLFAGIGD 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  G  W IL N + G  A      E A S+ ITG    R ++LP   P 
Sbjct: 120 T----MKVTVIASGCVWPILLNTVEGVRAVDPVMLETARSYGITGPSRLRNLVLPSAGPQ 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
              G   A        ++SE+ +       + G+G  I +     + P++  G+
Sbjct: 176 IFAGLRQALSLGIILMVISEMFA------ASNGIGFTIVQFQRSFAVPDMWTGI 223



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 90/224 (40%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           R I+   P       L      +  R+++   ++ +      T+    RR+  V  P+L+
Sbjct: 38  RTILRTFPDVWTADRLRDDVLPSIWRLVAGYALAAVVGVAAGTVIGSYRRVRAVCEPVLE 97

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++++P    +   +++       K        +  I +  VW +  +  + +  +   +
Sbjct: 98  FLRAVPPPVLIPVIMLFAGIGDTMK--------VTVIASGCVWPILLNTVEGVRAVDPVM 149

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +RS+ ++G  +   L +P + P +   +  ++S G   +V SEM    +      GI
Sbjct: 150 LETARSYGITGPSRLRNLVLPSAGPQIFAGLRQALSLGIILMVISEMFAASN------GI 203

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
           G  I    +   +  +   +L +  + F   +  QL+ R ++ W
Sbjct: 204 GFTIVQFQRSFAVPDMWTGILVLGLLGFVLSVVFQLVERRVLAW 247


>gi|170760479|ref|YP_001787041.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169407468|gb|ACA55879.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 527

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +           L +++++++       +  K+++L   ++   ++ Q+IP L  
Sbjct: 10  LKKSQILSLLVEHVELTLISVLVAVVIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAI 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L F +                 AI  +    +  +  + Y  + NI  D+ E ++   ++
Sbjct: 70  LGFLIPLIGIG--------SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMT 121

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P +MP ++  + ++       V A  ++ +    I   G+G  +   I+ 
Sbjct: 122 NTQTLKLIKIPLAMPIIMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQT 174

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D   IL+  +    +  + D +
Sbjct: 175 VDNNLILFGAIPAAILALVIDWV 197



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A +I +P+GI I     ++  +  FA L  A P+      ++  +       + 
Sbjct: 27  LISVLVAVVIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----SA 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALVID 195


>gi|222055627|ref|YP_002537989.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564916|gb|ACM20888.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 251

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 73/175 (41%), Gaps = 13/175 (7%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + + + P  + ++  P  +  P  ++ +  + L+     + ++  G  W IL   I G 
Sbjct: 87  RLRTILMPIFRGVSPIPPTMLIPYAIAILPTFWLS----SAFIIFAGAFWPILMGTIHGV 142

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +     + + AS+  + G+R  R +I PG  P   +GA  A   ++    V+E+      
Sbjct: 143 TLLEERYLDNASALGLGGFRLMRKVIFPGALPMIFSGAGMALVFSFILLTVAEMFG---- 198

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLYGTRC 584
                G+G +I    +   +P+V+ G+L M   ++ +      L   L  +  + 
Sbjct: 199 --AKAGMGHFIQYYADFSDYPKVLAGMLFMSLVIVLIMELFDLLQKRLLHWTGKR 251



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 18/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL  ++ +  I   L G  E  +   +V I+P +      L Q    +   +L +  ++L
Sbjct: 13  LLVLLMALFEIATDLTGWLEPVLFPGLVKILPELKRSFPKLLQGLVNSFGLLLPSYALAL 72

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L     RL  +L+PI   +  IP    + + +               L++ F
Sbjct: 73  VLGIGGGLLVGFCGRLRTILMPIFRGVSPIPPTMLIPYAIAIL--------PTFWLSSAF 124

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF    W +       +  +     + + +  L G++    +  P ++P +     M++
Sbjct: 125 IIFAGAFWPILMGTIHGVTLLEERYLDNASALGLGGFRLMRKVIFPGALPMIFSGAGMAL 184

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQ 257
              +  +  +EM           G+G +I       D   +L  ML M  VI L      
Sbjct: 185 VFSFILLTVAEMFGAKA------GMGHFIQYYADFSDYPKVLAGMLFMSLVIVLIMELFD 238

Query: 258 LLFRPMIVWSNK 269
           LL + ++ W+ K
Sbjct: 239 LLQKRLLHWTGK 250


>gi|88855181|ref|ZP_01129846.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815709|gb|EAR25566.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
          Length = 322

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 99/237 (41%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +++  +I  +  G   +     +  ++ ++LD     + A  T   +L A  I++L
Sbjct: 51  FWVMLIIFAVIAFVARGWLFSAG-TTVGFLLILSLDQW---ENAMDTLALVLVAAAIAVL 106

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +     LAAK + +  ++ P+LD +Q++P   +L   ++ F     G V G     +FA
Sbjct: 107 VSVPLGILAAKYQTVSTIVKPVLDFLQTMPAFVYLIPALILFR---IGDVPGIVATVLFA 163

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  + +++ E  ++F  S  +    + +P ++P ++  +   + 
Sbjct: 164 LAPG-----VRLTELGIRGVDKEVVEAGQAFGSSPSRILRQIQLPLALPSIMAGINQVIM 218

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + M+  G       G+G  +  ++   D+     A L+++ +    D+L
Sbjct: 219 LSLSMVVIASMVGAG-------GLGKPVIQSLSRADVSLGFEAGLSVVLLAIFLDRL 268



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 81/233 (34%), Gaps = 13/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + + +  F V+  VA G  + +   +   F     L        T+  V+V   IA +
Sbjct: 49  PPFWVMLIIFAVIAFVARGWLFSAGTTV--GFLLILSLDQWENAMDTLALVLVAAAIAVL 106

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + +P+GI       +S+ ++P    L   PA V+    +       + P +  ++L    
Sbjct: 107 VSVPLGILAAKYQTVSTIVKPVLDFLQTMPAFVYLIPALILFRIGDV-PGIVATVLFALA 165

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                +     G      +  E   +F  +  R  R I LP   P  + G       + +
Sbjct: 166 ---PGVRLTELGIRGVDKEVVEAGQAFGSSPSRILRQIQLPLALPSIMAGINQVIMLSLS 222

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ +   G       GLG  + +S  +          L +    + L+R 
Sbjct: 223 MVVIASMVGAG-------GLGKPVIQSLSRADVSLGFEAGLSVVLLAIFLDRL 268


>gi|153955414|ref|YP_001396179.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|219855830|ref|YP_002472952.1| hypothetical protein CKR_2487 [Clostridium kluyveri NBRC 12016]
 gi|146348272|gb|EDK34808.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
 gi|219569554|dbj|BAH07538.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 529

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 76/190 (40%), Gaps = 15/190 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A++IS++          ++R+L   ++ + +++QSIP L  L F +           
Sbjct: 29  TLFAVLISVIIGIPLGMFIIRNRKLSTGVIGVANVIQSIPSLALLGFLIPVLGIG----- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + +  L NI   + E +    L+  Q    + +P +MP 
Sbjct: 84  ---SKPAIAMVVLYSLLPIIKNTFTGLTNIDGSIIEAAEGLGLTKSQILIKVRLPLAMPV 140

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    +   G+G  +   ++  +   IL   +    +
Sbjct: 141 IMSGIRIS------AVTAVGLMTIAAF-VGAGGLGYLVFSGVQTVNNNMILAGAIPACFL 193

Query: 252 IFLYDQLLFR 261
              +D ++ +
Sbjct: 194 AIFFDFIIGK 203



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++I+ II IP+G++I     +S+ +   A ++ + P+      ++  +       + 
Sbjct: 30  LFAVLISVIIGIPLGMFIIRNRKLSTGVIGVANVIQSIPSLALLGFLIPVLGIG----SK 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   I+ N   G +       E A    +T  +    + LP   P  ++G 
Sbjct: 86  PAIAMVVLYSLLPIIKNTFTGLTNIDGSIIEAAEGLGLTKSQILIKVRLPLAMPVIMSGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +    +  +   ++ G +  C   +  +
Sbjct: 146 RISAVTAVGLMTIAAFVGAG-------GLGYLVFSGVQTVNNNMILAGAIPACFLAIFFD 198


>gi|241664061|ref|YP_002982421.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|240866088|gb|ACS63749.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 289

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A++  IP+G+ +G        + P  +     P   + PLVV  +    
Sbjct: 98  SALRVFGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVVIWLGI-- 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  +   +    A +   +  +  R++ILP   P 
Sbjct: 156 --DERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVVRHVILPAALPE 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T G+G  +  ++       VV+G++++   
Sbjct: 214 ILTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDLVVMGIVLIGAI 267

Query: 566 VLALN 570
             A +
Sbjct: 268 AWAFD 272



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 90/247 (36%), Gaps = 29/247 (11%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHS---------------LPQYASRTTLRM 72
           V+ +I +L+     TT        +P    V                 L  +   + LR+
Sbjct: 43  VLSVITLLVLWWAATTFHWVPPLFLPSPQAVGRAFIDAWHGDIQGGQPLAAHLGWSALRV 102

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A  ++ +           SR    +L P ++  + +P L +L   V++          
Sbjct: 103 FGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVVIWLGID------ 156

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A I  I+ +    +  +    + +   +    + +   S  Q   ++ +P ++P +
Sbjct: 157 --ERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVVRHVILPAALPEI 214

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +++  GW  +VA+EM+          G+G  +  A        ++  ++ +  + 
Sbjct: 215 LTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDLVVMGIVLIGAIA 268

Query: 253 FLYDQLL 259
           + +D  +
Sbjct: 269 WAFDLAM 275


>gi|254386759|ref|ZP_05002051.1| ABC transporter permease [Streptomyces sp. Mg1]
 gi|194345596|gb|EDX26562.1| ABC transporter permease [Streptomyces sp. Mg1]
          Length = 307

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 91/228 (39%), Gaps = 12/228 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           A+   W S+  +    T  +V++       ++ R ++  ++A  I  P+G+ +     + 
Sbjct: 84  ALSAVWDSLADMWLGGTLLEVIW------TSVSRGLLGFLLALAIGTPLGLLVARVKFVR 137

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + I P  Q L + P+  + P  V          +  +  +++ G    I   +++G    
Sbjct: 138 AAIGPILQGLQSLPSVAWVPPAVLWFGL----NDAMMYTVILLGAVPSIANGLVSGIDQV 193

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  F     +   TG R  R++++P   P Y+ G       +W + + +E+ +       
Sbjct: 194 PPLFLRAGRTLGATGLRGARHVVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGL 253

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
               G  +         P V L ++++    +A++  ++ P+  +  R
Sbjct: 254 GL--GQLLENGRNNIDLPGVFLAIILILVVGIAIDLLIFSPVERWVLR 299



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 84/213 (39%), Gaps = 10/213 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +    +  R L   +++L        L A+ + +   + PIL  +QS+P + ++  
Sbjct: 99  GTLLEVIWTSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQSLPSVAWVPP 158

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++F                  I    V ++   +   +  +P       R+   +G +
Sbjct: 159 AVLWFGLNDAMMYT--------VILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGATGLR 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++PG +  +    +  W  ++A+E+I     +      G  +       DL
Sbjct: 211 GARHVVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNIDL 268

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             +  A++ +L V    D L+F P+  W  + R
Sbjct: 269 PGVFLAIILILVVGIAIDLLIFSPVERWVLRSR 301


>gi|56696030|ref|YP_166384.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56677767|gb|AAV94433.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 687

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 89/606 (14%), Positives = 188/606 (31%), Gaps = 84/606 (13%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            LVIGI+  L            +       +           T   +  ++ ++LL    
Sbjct: 95  PLVIGIVTALGW-YLGGAAMAALGLGGLGFVLASGYWHEGMNTLALVAVSVPLALLVGGA 153

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +  R+   +  +LDIMQ++P   +LT  +  F     G V+G   +AI+A    
Sbjct: 154 IGILANEVPRIRGAVQAVLDIMQTVPTFAYLTPLLALFGF---GPVVGLIASAIYA---- 206

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  ++   L  +  +++E +     +  Q+ + + +P +   ++      +     
Sbjct: 207 -APPMARNVMLGLERVEAEVKEAAIMSGGTRMQQLFQVEIPSASRQIMVGFNQCLMAALS 265

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ-------- 257
            V+ + +I   +       IG  + L +++    A L A + ++    + D+        
Sbjct: 266 MVIIAAVIGGFND------IGWEVLLTMRKAQFGAALLAGMVIVAFAVIIDRMSAVLATE 319

Query: 258 ---------------------LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
                                + +  +   S+   L+                       
Sbjct: 320 RKRHDIRVVWALLGLALAFTLVFWTRLPAASDLTLLDPVAVSLDQGLTRFTQANGAALDA 379

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
               + +    PL   + +            P+    L +   V  +   +      G+ 
Sbjct: 380 LKNNTLYYVLLPLRIGLDQAVLPFTWGFSWTPQMSSALFALGAVLALGMAWAGRASAGLM 439

Query: 357 IGIAWQSIGYIVNHFTYQDVLY-VIWLGCITMFRVVVLIII------------------- 396
           I I +  I   + +  +  VL     LG +   R + L+++                   
Sbjct: 440 ILIGFGMIETGITNLPWPFVLTGAAALGYVAGGRRLALMVVILLGTILVSGLWDRALLSL 499

Query: 397 ---------ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
                     +++   +G+       +   ++P   +L   P  VF   V+        +
Sbjct: 500 YLCGASVFACAVLGGAIGVASAVWTPVWRVVRPICDMLQTIPLFVFLIPVLMVFQIGEFS 559

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L +    I     Y       G    P++  E A S   T W+  R +  P   P  +
Sbjct: 560 AFLAICAYAIVPMIRY----TRHGLVDTPDEMMEAAISSGATDWQILRDVRAPYAAPTIL 615

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A++  +++ +         TTGLG  I  +  +      +     M    L
Sbjct: 616 LGLNQTILYAFSMLVIAALIG-------TTGLGQSIYLALGQADVGLGISAGAAMAILAL 668

Query: 568 ALNRFL 573
             +R +
Sbjct: 669 IADRLV 674



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 98/287 (34%), Gaps = 17/287 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE--NFLQLCSNQRVSYMLDIFWFC 350
               ++G     +  P ++ V  +               + + +      +++L+   + 
Sbjct: 36  PVAPWLGAWPKAWVLPATDWVGTVMTAFLAWFKPVARLFSAVMVYPMDAANWVLNATPWP 95

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           +V G+   + W   G  +       + +V+  G       T+  V V + +A ++   +G
Sbjct: 96  LVIGIVTALGWYLGGAAMAALGLGGLGFVLASGYWHEGMNTLALVAVSVPLALLVGGAIG 155

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I     P I   +Q    ++   P   +   +++   +  +   +  ++         + 
Sbjct: 156 ILANEVPRIRGAVQAVLDIMQTVPTFAYLTPLLALFGFGPVVGLIASAIY----AAPPMA 211

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            NV+ G      + KE A     T  +    + +P      + G       A +  I++ 
Sbjct: 212 RNVMLGLERVEAEVKEAAIMSGGTRMQQLFQVEIPSASRQIMVGFNQCLMAALSMVIIAA 271

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V    +       +G  +  +  K  F   +L  +++  F + ++R 
Sbjct: 272 VIGGFND------IGWEVLLTMRKAQFGAALLAGMVIVAFAVIIDRM 312


>gi|319891725|ref|YP_004148600.1| Choline transporter, permease protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161421|gb|ADV04964.1| Choline transporter, permease protein [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 505

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 25/206 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I++L       L  K+++L  V++ I  ++Q+IP L  L  
Sbjct: 13  GELFAALLEHIQLSFVALLIAVLIGVPLGILLTKTKKLSEVVINIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + A+ A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPLFGIG--------TVPAVIALVVYALLPILRNTYTGITGVDYSLIEAAKGIGMKPIR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  IL   +    +  L+D +L
Sbjct: 173 DRNHTSLILIGAIPAAILAILFDVIL 198



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V ++IA +I +P+GI +     +S  +   A +L   P+     L++       +   +
Sbjct: 27  FVALLIAVLIGVPLGILLTKTKKLSEVVINIAAVLQTIPSLALLGLMIPLFGIGTVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G +       E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGITGVDYSLIEAAKGIGMKPIRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNHTSLILIGAIPAAILAILFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VIL 198


>gi|222082310|ref|YP_002541675.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726989|gb|ACM30078.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 287

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 98/253 (38%), Gaps = 15/253 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   ++  +    L          D +  +        LP+    T   +++  V   +
Sbjct: 44  IVILAIIWEVYARHLDNPLLFPTLSDTLSALYDRFADGVLPERIWTTLKVLITGYVTGTV 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +A  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 104 LAAILTVVAINTRVGTDFLETMTAMFNPLPAISLLPLALIWFGLG--------PASLVFV 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     + R L  V  ++ L+G    + + +P + P ++  + +  +
Sbjct: 156 LVHSVLWAVALNTHAGFLGVSRTLRMVGANYGLTGLSYVFRILIPAAFPSILTGLKIGWA 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
             W  ++A+E++    +     G+G +I       D+ A+   +LT++ +  + + L+F 
Sbjct: 216 FSWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLDIPAVFAGLLTVIVIGLIVENLVFQ 273

Query: 261 ----RPMIVWSNK 269
               R ++ W  K
Sbjct: 274 TIERRTLLKWGMK 286



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 6/190 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  ++   +  +++   + +        +  ++    +    PA    PL +       
Sbjct: 90  TLKVLITGYVTGTVLAAILTVVAINTRVGTDFLETMTAMFNPLPAISLLPLALIWFGLGP 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  +++    W +  N  AG        + V +++ +TG  +   I++P  FP 
Sbjct: 150 AS----LVFVLVHSVLWAVALNTHAGFLGVSRTLRMVGANYGLTGLSYVFRILIPAAFPS 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       +W   I +E+     +     GLG +I E+      P V  G+L +   
Sbjct: 206 ILTGLKIGWAFSWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAVFAGLLTVIVI 263

Query: 566 VLALNRFLWH 575
            L +   ++ 
Sbjct: 264 GLIVENLVFQ 273


>gi|325848517|ref|ZP_08170177.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480745|gb|EGC83802.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 261

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 98/247 (39%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++ N     A +++  II  + +        P  +       +   S+ +    +  R+
Sbjct: 9   KLWKNFLVFFAILIIWQIIYKMGIFSPIYLPGPYKVFQTFLAMVYDGSIFENILASLYRV 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    ++ + +F+ A +      +      ILD +++IP LG +   +++          
Sbjct: 69  LVGYFLAFILSFILALIFYLKADIFPYFSNILDFLKNIPPLGLVPLLILWVGIG------ 122

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E + I  +F +  + +  ++ +      +D+ E+ R+F  +  + F  + +P S+  +
Sbjct: 123 --EFSKISIVFMASFFPIFLNIQKGFMEADKDMVEMGRAFSYNDREIFTKIVLPSSLKDI 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                + +   +  ++A+EM+          G+G  I  +        ++  +L +  + 
Sbjct: 181 FVGARIGLGYAYRSIIAAEMLAASK------GLGYLINFSRLMSRTDKVIVGILVIGFIG 234

Query: 253 FLYDQLL 259
            + D++ 
Sbjct: 235 MVSDKIF 241



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 12/243 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRV 390
           +L  N  V + + I W  +         +    Y V       V    +      +++RV
Sbjct: 9   KLWKNFLVFFAILIIWQIIYKMGIFSPIYLPGPYKVFQTFLAMVYDGSIFENILASLYRV 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V   +A I+   + +    +  I          L   P     PL++  V     +   
Sbjct: 69  LVGYFLAFILSFILALIFYLKADIFPYFSNILDFLKNIPPLGLVPLLILWVGIGEFSK-- 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++   + + I  N+  G      D  E+  +F       +  I+LP        GA
Sbjct: 127 --ISIVFMASFFPIFLNIQKGFMEADKDMVEMGRAFSYNDREIFTKIVLPSSLKDIFVGA 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G A+ + I +E+ +       + GLG  I  S       +V++G+L++    +  +
Sbjct: 185 RIGLGYAYRSIIAAEMLA------ASKGLGYLINFSRLMSRTDKVIVGILVIGFIGMVSD 238

Query: 571 RFL 573
           +  
Sbjct: 239 KIF 241


>gi|323465108|gb|ADX77261.1| glycine betaine/carnitine/choline transport system permease protein
           [Staphylococcus pseudintermedius ED99]
          Length = 505

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 25/206 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A++I++L       L  K+++L  V++ I  ++Q+IP L  L  
Sbjct: 13  GELFAALLEHIQLSFVALLIAVLIGVPLGILLTKTKKLSEVVINIAAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + A+ A+    +  +  + Y  +  +   L E ++   +   +
Sbjct: 73  MIPLFGIG--------TVPAVIALVVYALLPILRNTYTGITGVDYSLIEAAKGIGMKPIR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLTKVELPIAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  IL   +    +  L+D +L
Sbjct: 173 DRNHTSLILIGAIPAAILAILFDVIL 198



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V ++IA +I +P+GI +     +S  +   A +L   P+     L++       +   +
Sbjct: 27  FVALLIAVLIGVPLGILLTKTKKLSEVVINIAAVLQTIPSLALLGLMIPLFGIGTVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G +       E A    +   R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGITGVDYSLIEAAKGIGMKPIRRLTKVELPIAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +++G +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNHTSLILIGAIPAAILAILFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VIL 198


>gi|326793092|ref|YP_004310913.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326543856|gb|ADZ85715.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 254

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 98/247 (39%), Gaps = 15/247 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++      ++  + +  ++  +          P  +++     L    + +    + +R+
Sbjct: 5   KVIKTTISVVILISIWALVTKMGVVSSYILPSPSKVLNSFFKMLQTGEIFEDIYISYIRV 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I+ L  F++A +     R       I+  ++++P L  ++  +++F      KV 
Sbjct: 65  LKGFFIATLVAFLFAMVRIILPRCNDYYESIVQFLKNVPPLSLISLLILWFGIGETTKVG 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A F I+         +  +   +  + L EV   +  S    F+ + +P++M  +
Sbjct: 125 IIVLTAFFPIY--------LNTVKGFVSCDKKLLEVGEIYGYSEVDSFFKIRLPYAMSDI 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  M + +   W  ++++EMI          G+G  I  A +      ++  +L +  V 
Sbjct: 177 LVGMRIGLGYSWRAIISAEMIAASA------GLGHMILFAQQMSRTDKVIVGILVIGVVG 230

Query: 253 FLYDQLL 259
           ++ D+L 
Sbjct: 231 YITDRLF 237



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 81/245 (33%), Gaps = 11/245 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
               + +   V  ++ I+      GV       S   ++N F        +     I+  
Sbjct: 3   RSKVIKTTISVVILISIWALVTKMGVVSSYILPSPSKVLNSFFKMLQTGEIFEDIYISYI 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV+    IA+++     +     P  +   +   Q L   P      L++          
Sbjct: 63  RVLKGFFIATLVAFLFAMVRIILPRCNDYYESIVQFLKNVPPLSLISLLILWFGIGETTK 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 +++    + I  N + G  +      EV   +  +    +  I LP      + 
Sbjct: 123 VG----IIVLTAFFPIYLNTVKGFVSCDKKLLEVGEIYGYSEVDSFFKIRLPYAMSDILV 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G     G +W A I +E+ +       + GLG  I  + +     +V++G+L++      
Sbjct: 179 GMRIGLGYSWRAIISAEMIA------ASAGLGHMILFAQQMSRTDKVIVGILVIGVVGYI 232

Query: 569 LNRFL 573
            +R  
Sbjct: 233 TDRLF 237


>gi|294629362|ref|ZP_06707922.1| ABC transporter [Streptomyces sp. e14]
 gi|292832695|gb|EFF91044.1| ABC transporter [Streptomyces sp. e14]
          Length = 295

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R      I     + + +  G      + I     L  A P     PL +  +  
Sbjct: 100 ATSLRRAAYGFAIGLGAGVLLALAAGLSRTGEALIDGTVNLNRAIPTLGLIPLFILWLGI 159

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +++++       +  N  A  +     F E+A    ++ +R+ R I++PG  
Sbjct: 160 GETFKVAIIAIVVYI----PVYLNTHAALAGIDTRFVELAEVQGLSRYRFIRQIVIPGAL 215

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +  G      G+W   +V E  +       T+GLG  + ++   G    +++G+L+  
Sbjct: 216 PGFFVGLRLGVTGSWLGLVVLEQIN------ATSGLGYMMFQAQNYGQTDVILVGLLVYG 269

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L  +   R +   +  +
Sbjct: 270 VFGLVSDSVVRLIERRVLSW 289



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  ++          +LP   + +  R      I L    + A  A  SR    ++  
Sbjct: 77  PAPWTVLKTAGHLWTDGTLPTDVATSLRRAAYGFAIGLGAGVLLALAAGLSRTGEALIDG 136

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +++ ++IP LG +   +++            E   +  I       +  + + +L  I 
Sbjct: 137 TVNLNRAIPTLGLIPLFILWLGIG--------ETFKVAIIAIVVYIPVYLNTHAALAGID 188

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E++    LS ++    + +P ++PG    + + ++G W  +V  E I         
Sbjct: 189 TRFVELAEVQGLSRYRFIRQIVIPGALPGFFVGLRLGVTGSWLGLVVLEQI------NAT 242

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            G+G  +  A        IL  +L       + D   +L+ R ++ W
Sbjct: 243 SGLGYMMFQAQNYGQTDVILVGLLVYGVFGLVSDSVVRLIERRVLSW 289


>gi|253998658|ref|YP_003050721.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|253985337|gb|ACT50194.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
          Length = 320

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S++ +P+GI  G    +S   +PF +     PA  F  L V+ +  Y 
Sbjct: 126 SIQVIFWGFVISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD 185

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +   + W+  R++++PG+ P 
Sbjct: 186 GPK----IAIIVIGTFFQQVLIISNTTRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPE 241

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                    G AW   IV+E+         ++G+  +I +      F  V   
Sbjct: 242 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYEHFENVYAA 288



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 14/216 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P+  D   L Q   ++   +    VIS L       LA     +  +  P ++
Sbjct: 104 YTAFTTPPVQRDGLWLHQSLWQSIQVIFWGFVISSLVGVPLGILAGTYSAVSRLFEPFIE 163

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I     +     +  +   +   L
Sbjct: 164 FFRYLPAPAFGALAVAVLGIYDGPK--------IAIIVIGTFFQQVLIISNTTRKLDYSL 215

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   S W+   ++ +P  +P L  +  + +   W +++ +E+I          GI
Sbjct: 216 LEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILLGWAWTYLIVAELIGTSS------GI 269

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +I    + +    +  A+L +  +    D +L R
Sbjct: 270 TWFITQQARYEHFENVYAAILIIGIIGLGTDMVLAR 305


>gi|17546059|ref|NP_519461.1| aliphatic sulfonate ABC transporter transmembrane protein
           [Ralstonia solanacearum GMI1000]
 gi|17428355|emb|CAD15042.1| putative aliphatic sulfonates transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 264

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 88/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+            L ++ + +T R L    I          L    R    +L 
Sbjct: 43  LPAPLDVARSAIELARSGELWKHVAVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLD 102

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP+L  +   +++F           E A +F +     + +  + Y  +  +
Sbjct: 103 TTLQMIRNIPVLALIPLVILWFGID--------ESAKLFLVSLGVFFPIYLNTYHGIRAV 154

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LS  + +  + +P ++P ++  +  S+   W  ++ +E +        
Sbjct: 155 DPALVEMARSYGLSRARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVS------A 208

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      +L  +L    +  L D L   L R  + W   ++
Sbjct: 209 QAGIGYMTMNAREFLQTDVVLLGILLYALLGKLADLLSRALERFWLRWHPGYQ 261



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 79/245 (32%), Gaps = 18/245 (7%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV-VCGVAIGIAWQSIGYIVNH 370
              K    L   R       + L             W    +    + +A  +I    + 
Sbjct: 1   MASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSG 60

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             ++ V        ++ +R ++   I   + + +G+  G      + +    Q++   P 
Sbjct: 61  ELWKHV-------AVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPV 113

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PLV+                L+  G  + I  N   G  A      E+A S+ ++ 
Sbjct: 114 LALIPLVILWFGI----DESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSR 169

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R +R +ILPG  P  + G   + G  W   IV+E  S         G+G     + E  
Sbjct: 170 ARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFL 223

Query: 551 SFPEV 555
               V
Sbjct: 224 QTDVV 228


>gi|288961135|ref|YP_003451474.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288913443|dbj|BAI74930.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 289

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++FR++   +IA+ + IP+G+ +G        +    +     P   + PL++  +   
Sbjct: 97  ASLFRILSAALIAASLGIPLGLAMGLNRWAKGVLDTPIEFYWPLPPLAYLPLMIIWLGIG 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++    L+L +       +  +  AG  + P +    A S   + W+ +R I+LP   P
Sbjct: 157 EVSKIALLTLAIFA----PVCLSAQAGVRSLPIERVNAALSLGASRWQLFRAIVLPSALP 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG     G  W+  + +E+ +       T G+G  I  ++   +   V +G+ I+  
Sbjct: 213 EILTGLRIGIGVGWSTLVAAELIA------ATRGIGFMIMSASHFLATDVVFVGIGIIAA 266

Query: 565 FVLAL 569
           F  A 
Sbjct: 267 FAFAF 271



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 86/231 (37%), Gaps = 15/231 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
           V    + +V       +L ++ S +  R+LSA +I+             +R    VL   
Sbjct: 74  VAIQFLAVVEDGYAGATLWEHVSASLFRILSAALIAASLGIPLGLAMGLNRWAKGVLDTP 133

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           ++    +P L +L   +++       K+    LA    +          S    + ++P 
Sbjct: 134 IEFYWPLPPLAYLPLMIIWLGIGEVSKIALLTLAIFAPVC--------LSAQAGVRSLPI 185

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +    + S   S WQ F  + +P ++P ++  + + +  GW  +VA+E+I          
Sbjct: 186 ERVNAALSLGASRWQLFRAIVLPSALPEILTGLRIGIGVGWSTLVAAELIA------ATR 239

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           GIG  I  A        +   +  +    F +   + R +  W   ++ + 
Sbjct: 240 GIGFMIMSASHFLATDVVFVGIGIIAAFAFAFSYGM-RLLEAWLVPWKGKS 289


>gi|73541663|ref|YP_296183.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119076|gb|AAZ61339.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 267

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 89/258 (34%), Gaps = 16/258 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS------IGYIVNHFTYQ 374
             +    P    ++ +     +++           +      +      +  +   +   
Sbjct: 2   SAVWIGSPRRDWRIVARTLAPWVVPALLLVAWQAASQHGWLSTRVLPAPLAVVKAGWELA 61

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               +     ++ +R VV + +   + + +G+  G     ++ +    Q++   P     
Sbjct: 62  RSGELWTHVWVSTWRAVVGLAVGGGLGLLLGLLTGTFRTAATLLDSTLQMVRNIPTLALI 121

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+  G  + +  N   G  A      E+A S+ ++GWR +
Sbjct: 122 PLVILWFGI----DETAKLFLVALGVFFPVYLNTFHGIRAVDPGLIEMARSYGLSGWRLY 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +ILPG  P  + G   + G  W   IV+E  S        +G+G     + E      
Sbjct: 178 REVILPGALPNILVGVRFSLGLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDV 231

Query: 555 VVLGVLIMCCFVLALNRF 572
           V++G+L+        +  
Sbjct: 232 VLVGILLYALLGKLADVL 249



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R           ++     +       +    P  +V           L  +   +T R 
Sbjct: 18  RTLAPWVVPALLLVAWQAASQHGWLSTRVLPAPLAVVKAGWELARSGELWTHVWVSTWRA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  + +      +   L    R    +L   L ++++IP L  +   +++F         
Sbjct: 78  VVGLAVGGGLGLLLGLLTGTFRTAATLLDSTLQMVRNIPTLALIPLVILWFGID------ 131

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E A +F +     + +  + +  +  +   L E++RS+ LSGW+ +  + +P ++P +
Sbjct: 132 --ETAKLFLVALGVFFPVYLNTFHGIRAVDPGLIEMARSYGLSGWRLYREVILPGALPNI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S+   W  ++ +E I          GIG     A +      +L  +L    + 
Sbjct: 190 LVGVRFSLGLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLG 243

Query: 253 FLYDQL---LFRPMIVWSNKFR 271
            L D L   L R  + W   ++
Sbjct: 244 KLADVLSRGLERIWLRWHPGYQ 265


>gi|325519271|gb|EGC98716.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 228

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV    ++A+ I +P GI +G        + P  +     P   + PLVV       
Sbjct: 37  SAARVFGAFLLATAIGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVVIWFGI-- 94

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  A   +    A S   +  +  R+++LP   P 
Sbjct: 95  --DETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIVRHVVLPAALPE 152

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T GLG  +  ++       VV+G+LI+   
Sbjct: 153 ILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDIVVMGILIIGLI 206

Query: 566 VLALN 570
               +
Sbjct: 207 AWLFD 211



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+  A +++         L   SR    VL P+L+  + +P L +L   V
Sbjct: 30  LSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRVARGVLDPLLEFYRPLPPLAYLPLVV 89

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  IF +    +  +    +     +    + S   S  Q  
Sbjct: 90  IWFGID--------ETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQIV 141

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 142 RHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDI 195

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  +L +  + +L+D   + + R ++ W  +
Sbjct: 196 VVMGILIIGLIAWLFDLAMRWIERRVVPWKGR 227


>gi|313200731|ref|YP_004039389.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|312440047|gb|ADQ84153.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 320

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S++ +P+GI  G    +S   +PF +     PA  F  L V+ +  Y 
Sbjct: 126 SIQVIFWGFVISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD 185

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +   + W+  R++++PG+ P 
Sbjct: 186 GPK----IAIIVIGTFFQQVLIISNTTRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPE 241

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                    G AW   IV+E+         ++G+  +I +      F  V   
Sbjct: 242 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYEHFENVYAA 288



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 14/216 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P+  D   L Q   ++   +    VIS L       LA     +  +  P ++
Sbjct: 104 YTAFTTPPVQRDGLWLHQSLWQSIQVIFWGFVISSLVGVPLGILAGTYSAVSRLFEPFIE 163

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I     +     +  +   +   L
Sbjct: 164 FFRYLPAPAFGALAVAVLGIYDGPK--------IAIIVIGTFFQQVLIISNTTRKLDYSL 215

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   S W+   ++ +P  +P L  +  + +   W +++ +E+I          GI
Sbjct: 216 LEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILLGWAWTYLIVAELIGTSS------GI 269

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +I    + +    +  A+L +  +    D +L R
Sbjct: 270 TWFITQQARYEHFENVYAAILIIGIIGLGTDMVLAR 305


>gi|291295668|ref|YP_003507066.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290470627|gb|ADD28046.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 279

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V G++ +    +    V    + +    ++   L     +T   +L+A+ +S++      
Sbjct: 48  VAGLVFLAGWWLSRRLVFALGMGLGVWLIEALGLWDKGMQTLALVLAAVAVSVIIGLPLG 107

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  +S R    ++PILD MQ++P   +L   ++ F           ++ A+ A     V
Sbjct: 108 ILMGRSDRFRGFMLPILDAMQTMPSFVYLIPALLLFGLG--------KVPALIATVIYAV 159

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             M       L  + R++ E + +F  + WQ+   + +P ++P L+  +  +       V
Sbjct: 160 PPMIRLTDLGLRMVQREVMEAAEAFGATSWQRLLKVELPLALPNLLAGLNQTTMMALAMV 219

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V + MI          G+G  + L I+  D+     A + ++ +  + D+L+
Sbjct: 220 VIASMI-------GARGLGEEVLLGIQRLDVGRGAVAGVAIVALAIVLDRLI 264



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 14/235 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVN---HFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
             L  FW   +  +A     + + + +         + L +   G  T+  V+  + ++ 
Sbjct: 41  RDLSWFWVAGLVFLAGWWLSRRLVFALGMGLGVWLIEALGLWDKGMQTLALVLAAVAVSV 100

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II +P+GI +G        + P    +   P+ V+    +       +   +   +    
Sbjct: 101 IIGLPLGILMGRSDRFRGFMLPILDAMQTMPSFVYLIPALLLFGLGKVPALIATVIY--- 157

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G      +  E A +F  T W+    + LP   P  + G       A 
Sbjct: 158 -AVPPMIRLTDLGLRMVQREVMEAAEAFGATSWQRLLKVELPLALPNLLAGLNQTTMMAL 216

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +++ +           GLG  +    ++       +  + +    + L+R +
Sbjct: 217 AMVVIASMIG-------ARGLGEEVLLGIQRLDVGRGAVAGVAIVALAIVLDRLI 264


>gi|325290918|ref|YP_004267099.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966319|gb|ADY57098.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 250

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 84/198 (42%), Gaps = 11/198 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-GFRPHISSKIQPFAQLLAAFPANVFFP 435
             +     I++ R V   IIA ++ IP+G+ + G+   +   ++P  + LA     V F 
Sbjct: 52  GQLFTHLGISLGRAVTGFIIAVLVSIPLGVLLAGWSEQVRLAVEPVTEWLAYINPFVVFH 111

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++  +             ++ +   W I+F+ ++G      D  + A S  ++ ++   
Sbjct: 112 IIIVFMGAGEATK----VTIIAWACIWPIMFSTLSGILHADQDIVKSARSLGLSRFQLTI 167

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP  FP  +TG   + G A    I +E+         ++GLG  I  +       E+
Sbjct: 168 KVLLPYAFPAILTGIRLSLGYALLFLIAAEMMG------ASSGLGWMIYRAQRNYQIVEM 221

Query: 556 VLGVLIMCCFVLALNRFL 573
              V ++    ++++  +
Sbjct: 222 FSAVTVIAALAVSIDGII 239



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 98/240 (40%), Gaps = 16/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +LAF+ V  +   L     +       +V  +   +    L  +   +  R ++  +I++
Sbjct: 14  VLAFLAVWELSCRLGWVDAQFIPAFSQVVIFIGGQIAEGQLFTHLGISLGRAVTGFIIAV 73

Query: 81  LFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L +     L A  S ++ + + P+ + +  I         +V+            E   +
Sbjct: 74  LVSIPLGVLLAGWSEQVRLAVEPVTEWLAYINPFVVFHIIIVFMGAG--------EATKV 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I  + +W + FS    + +  +D+ + +RS  LS +Q    + +P++ P ++  + +S
Sbjct: 126 TIIAWACIWPIMFSTLSGILHADQDIVKSARSLGLSRFQLTIKVLLPYAFPAILTGIRLS 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +     F++A+EM+          G+G  I  A +   ++ +  A+  +  +    D ++
Sbjct: 186 LGYALLFLIAAEMMGASS------GLGWMIYRAQRNYQIVEMFSAVTVIAALAVSIDGII 239


>gi|307354418|ref|YP_003895469.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
 gi|307157651|gb|ADN37031.1| binding-protein-dependent transport systems inner membrane
           component [Methanoplanus petrolearius DSM 11571]
          Length = 265

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 8/201 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T+     +      ++    + +  A I+ IP+GI +G+   + + I P  +++   P 
Sbjct: 53  VTFGPNGTLFPDIYKSLIHFAIGVTAAVIVGIPLGIAMGWFRDLDTAINPIIEIIRPIPP 112

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P  +        +       ++  G  + I  N   G    P  F E       TG
Sbjct: 113 LAWIPFAIIWFGLTDAS----AGFIIFIGAVFPIFINTYTGFRNVPRIFIEAGKVLGCTG 168

Query: 491 -WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            +   R +  P   P  V+G   + G  W   + +E+   G            +      
Sbjct: 169 NFSLIRRVAFPSSLPSIVSGIRISMGIGWMCLVGAEIFGAGGGKYGLG---KNLWTYYNL 225

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
              P VV+ ++++    L ++
Sbjct: 226 HQMPSVVVYMIVLGLIGLTID 246



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 82/200 (41%), Gaps = 13/200 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           ++ +     +  +++            R L   + PI++I++ IP L ++ F +++F   
Sbjct: 67  KSLIHFAIGVTAAVIVGIPLGIAMGWFRDLDTAINPIIEIIRPIPPLAWIPFAIIWFGL- 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGV 185
                   + +A F IF   V+ +  + Y    N+PR   E  +    +G +     +  
Sbjct: 126 -------TDASAGFIIFIGAVFPIFINTYTGFRNVPRIFIEAGKVLGCTGNFSLIRRVAF 178

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+P +V  + +SM  GW  +V +E+   G     L      +        + +++  M
Sbjct: 179 PSSLPSIVSGIRISMGIGWMCLVGAEIFGAGGGKYGLG---KNLWTYYNLHQMPSVVVYM 235

Query: 246 LTMLGVIFLYDQLLFRPMIV 265
           + +  +    D L+FR  + 
Sbjct: 236 IVLGLIGLTID-LVFRYFVN 254


>gi|327190590|gb|EGE57679.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli CNPAF512]
          Length = 284

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 15/261 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +  + + +  F   E      S      +L ++WF     +   +       ++     
Sbjct: 16  DRQVKLVKMASFGAGEKSTAAISVATALAILLLWWFVSALALVPHLFLPRPDEVLTQIGL 75

Query: 374 QD-----VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +      ++FR+VV  +IA    IP+G+ +G        +    +     
Sbjct: 76  VYRDGYAGASLSEHILASLFRIVVAALIAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPL 135

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   + PL++  +     +       L++      I  +  AG  + P +    A S   
Sbjct: 136 PPLSYLPLMIIWLGIGETSK----ITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGA 191

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  + +  I+LP   P  +TG   A G  W   + +E+ +       T G+G  I  +++
Sbjct: 192 SRLQLFIDIVLPSALPEILTGIRIALGVGWGTLVAAELIA------STRGIGFMIMSASQ 245

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
             +   V +G+ I+       
Sbjct: 246 FLATDVVFVGIGIIAVCAFTF 266



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 96/255 (37%), Gaps = 21/255 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI----TLDVHSLPQYASRTTLRMLSAMV 77
           L   +L   +  + L        P +++  + +         SL ++   +  R++ A +
Sbjct: 43  LAILLLWWFVSALALVPHLFLPRPDEVLTQIGLVYRDGYAGASLSEHILASLFRIVVAAL 102

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I++        L   +R    VL   ++    +P L +L   +++            E +
Sbjct: 103 IAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGIG--------ETS 154

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  +  +    +  S    + ++P +    +RS   S  Q F  + +P ++P ++  + 
Sbjct: 155 KITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGASRLQLFIDIVLPSALPEILTGIR 214

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY-- 255
           +++  GW  +VA+E+I          GIG  I  A +      +   +  +    F +  
Sbjct: 215 IALGVGWGTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIGIIAVCAFTFSA 268

Query: 256 -DQLLFRPMIVWSNK 269
             + L   ++ W  K
Sbjct: 269 AIRFLETYLVPWKGK 283


>gi|260589785|ref|ZP_05855698.1| taurine ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|331083212|ref|ZP_08332328.1| hypothetical protein HMPREF0992_01252 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540025|gb|EEX20594.1| taurine ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|330404601|gb|EGG84141.1| hypothetical protein HMPREF0992_01252 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 264

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 101/254 (39%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +   +  +LV  I++I     +       ++  + + ++   L +  + + + +    ++
Sbjct: 22  LISFVVAMLVWTILSITPQTARCFPNAVKVLQSIGLMVERGILLEDIASSLISVFWGFLL 81

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             + +   A L A  R +  +L P +  +++IP L ++   V+        +        
Sbjct: 82  GFVISVPVAFLMAWYRPVRFILEPWIQFIRNIPPLAYVPLVVIGVGVGRTPQ-------- 133

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +    MT +++Q + N+   L + +R    +    F  +  P + P ++  + +
Sbjct: 134 IIVICLATFLIMTVTIFQGVINVDETLIKAARVLGANDANLFVKVIFPATTPFIITAIRL 193

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S     ++A+E      +   + G+G  I       +   +L  ++ +  +  L +++
Sbjct: 194 GISTALTTLIAAE------STGAIAGLGMRIKSLANSYETTPMLLYIIIIGVIGMLAEKV 247

Query: 259 L---FRPMIVWSNK 269
           L    R +  W  K
Sbjct: 248 LKYFERKLTSWQEK 261



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 81/261 (31%), Gaps = 20/261 (7%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-------T 386
           +    +  ++L  F   ++    + I  Q+     N       + ++    I       +
Sbjct: 12  IGKIPKGIWLLISFVVAMLVWTILSITPQTARCFPNAVKVLQSIGLMVERGILLEDIASS 71

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V    ++  +I +PV   + +   +   ++P+ Q +   P   + PLVV  V     
Sbjct: 72  LISVFWGFLLGFVISVPVAFLMAWYRPVRFILEPWIQFIRNIPPLAYVPLVVIGVGVGRT 131

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  +++   T   +   +  G         + A          +  +I P   P+ 
Sbjct: 132 PQ----IIVICLATFLIMTVTIFQGVINVDETLIKAARVLGANDANLFVKVIFPATTPFI 187

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +T        A    I +E            GLG  I           ++L ++I+    
Sbjct: 188 ITAIRLGISTALTTLIAAE------STGAIAGLGMRIKSLANSYETTPMLLYIIIIGVIG 241

Query: 567 LALNRFLW---HPLYLYGTRC 584
           +   + L      L  +  + 
Sbjct: 242 MLAEKVLKYFERKLTSWQEKR 262


>gi|159186087|ref|NP_356394.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159141221|gb|AAK89179.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 258

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
              +     +           IT+   V+  II + + +  G+W+G  P ++  + PF +
Sbjct: 39  YDIVKQVIDWVADAGFYKHVGITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIK 98

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + A P  V  P+ V  +     +       L+ F T     FN + G            
Sbjct: 99  AVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF----FNAMQGVREVNPVVLSNT 154

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                      R++  P    + ++   T+ G A   +I+ E          + GLG  I
Sbjct: 155 RILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG------ASAGLGYLI 208

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A S        V  G++I+  FVL ++  L
Sbjct: 209 ARSEGNFDAVGVFAGIIILAVFVLIIDLIL 238



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DIV  V   +      ++   T    +   +I              S  +  VL P
Sbjct: 36  PAPYDIVKQVIDWVADAGFYKHVGITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKAVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R           ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVG---FAVVGA---IIGEYLGAS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  IA +    D + +   ++ +   + + D +L
Sbjct: 202 AGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLIL 238


>gi|313202296|ref|YP_004040954.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|312441612|gb|ADQ85718.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 251

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 81/235 (34%), Gaps = 10/235 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W  V       I  Q    +     +     ++     ++        +A+++ +
Sbjct: 17  FLLLCWVLVASRFPSYILPQPWEVMAEAQRWIADGSLLKHLKASLLEEAGGFALATLVAL 76

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G   G        I P   L  A P   + PL +      +      + +++     +
Sbjct: 77  LLGTTAGLFRRFRDFISPLNSLFMAIPPVAWAPLTMIIFGLGY----WSIVMVIFIAAVF 132

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  G  +  N     A +   T  +   ++ +P   P++          AW A +
Sbjct: 133 PMAITMQEGIQSIRNGEVRAARTLGATPLQMIVHVYMPASLPFFTAALRIGFSQAWRALV 192

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            +E+         + G+G  ++   + G+  +V+LG++I+      +   ++  L
Sbjct: 193 AAEMIG------ASKGIGWMVSMGGQVGNTNQVLLGIVIIGLIAWLMESLVFKRL 241



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 102/252 (40%), Gaps = 14/252 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L F+L+  ++            P +++      +   SL ++   + L       ++
Sbjct: 12  WASLPFLLLCWVLVASRFPSYILPQPWEVMAEAQRWIADGSLLKHLKASLLEEAGGFALA 71

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L   +  T A   RR    + P+  +  +IP + +   T++ F   Y         + +
Sbjct: 72  TLVALLLGTTAGLFRRFRDFISPLNSLFMAIPPVAWAPLTMIIFGLGY--------WSIV 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF + V+ M  +M + + +I       +R+   +  Q   ++ +P S+P     + + 
Sbjct: 124 MVIFIAAVFPMAITMQEGIQSIRNGEVRAARTLGATPLQMIVHVYMPASLPFFTAALRIG 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            S  W  +VA+EMI          GIG  +++  +  +   +L  ++ +  + +L + L+
Sbjct: 184 FSQAWRALVAAEMIGASK------GIGWMVSMGGQVGNTNQVLLGIVIIGLIAWLMESLV 237

Query: 260 FRPMIVWSNKFR 271
           F+ +      +R
Sbjct: 238 FKRLEKHYQTWR 249


>gi|226948964|ref|YP_002804055.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A2 str. Kyoto]
 gi|226842249|gb|ACO84915.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 527

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +           L ++++++        +  K+++L   ++   ++ Q+IP L  
Sbjct: 10  LKKSQILSLLVEHVELTLISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAI 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L F +                 AI  +    +  +  + Y  + NI  D+ E ++   ++
Sbjct: 70  LGFLIPLIGIG--------SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMT 121

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P +MP ++  + ++       V A  ++ +    I   G+G  +   I+ 
Sbjct: 122 NTQTLKLIKIPLAMPIIMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQT 174

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
            D   IL+  +    +  + D +
Sbjct: 175 VDNNLILFGAIPAAILALVIDWV 197



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A  I +P+GI I     ++  +  FA L  A P+      ++  +       + 
Sbjct: 27  LISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----SA 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++  +   IL N   G +    D  E A    +T  +  + I +P   P  + G 
Sbjct: 83  PAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A     ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 143 RIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALVID 195


>gi|324326754|gb|ADY22014.1| glycine betaine/L-proline ABC transporter, permease [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 278

 Score = 99.2 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       L +++ R    L P LD MQ++P   +L   + +F 
Sbjct: 91  TMQTLALVLTSVIISIIVGIPIGILTSQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 150

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 151 V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 203 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 255

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 256 GLAIVVIAIILDRI 269



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD----IFWFCVVC 353
           +G    +F + L  + + L R    I   F +      +      M+     + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIIILCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +        T+  V+  +II+ I+ IP+GI       
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQ-------TLALVLTSVIISIIVGIPIGILTSQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +  +  T  +       G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFAMPPTIRF----TDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|296156098|ref|ZP_06838937.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295893604|gb|EFG73383.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 323

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y 
Sbjct: 130 SIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD 189

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +     ++   ++++PGI P 
Sbjct: 190 GPK----IAIIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKFKLLTHVVIPGILPD 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI +      F  V   ++++   
Sbjct: 246 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYITQQARYEHFENVYAAIMMIGII 299

Query: 566 VLALN-RFLW--HPLYLY 580
            L  +    W    L+ +
Sbjct: 300 GLGTDLVLAWLGRKLFPW 317



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 68/214 (31%), Gaps = 14/214 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L Q    +   +    V+S +       +      +  +  P  +
Sbjct: 108 YTAFTTPPASRDGAWLHQSLWHSIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFE 167

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 168 FFRYLPAPAFGALMVAILGIYDGPK--------IAIIVIGTLFQQVLIVANTTRKLEYGL 219

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +     ++   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 220 FEAAMTLGTKKFKLLTHVVIPGILPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 273

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             YI    + +    +  A++ +  +    D +L
Sbjct: 274 TWYITQQARYEHFENVYAAIMMIGIIGLGTDLVL 307


>gi|283783136|ref|YP_003373890.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|283442227|gb|ADB14693.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
          Length = 271

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 85/226 (37%), Gaps = 10/226 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L +++F  +              I       +   ++    I++ RV++ +++  I  +
Sbjct: 32  ILVLWFFTTLSPTEDRSLPSPYEVIQAFIDLNNEGILLKSLGISILRVLLGLLLGIIFAV 91

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P GI  G     +  +   + +L + P     P+++  +             L+  G   
Sbjct: 92  PAGILAGGSKLGNIVVDKPSHMLRSIPFPALAPILIIFLGI----DETMKIALIAVGVFG 147

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N+  G     +   E+A  +H+     +  I+L G  P ++TG   A   AW A +
Sbjct: 148 PMYVNIRDGVRNIDSKLLELAKVYHVKKSTIFISILLRGTLPSFMTGLRFAISVAWVALV 207

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             E  +       + G+G  ++ + E     +++  V++     L 
Sbjct: 208 TCETVN------SSIGIGYILSRAQEFFRPDQMMACVIMYAIAGLG 247



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 83/235 (35%), Gaps = 14/235 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               +  +++     +     +    P +++       +   L +    + LR+L  +++
Sbjct: 26  WISTILILVLWFFTTLSPTEDRSLPSPYEVIQAFIDLNNEGILLKSLGISILRVLLGLLL 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++F      LA  S+   +V+     +++SIP        +++            E   
Sbjct: 86  GIIFAVPAGILAGGSKLGNIVVDKPSHMLRSIPFPALAPILIIFLGID--------ETMK 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I       M  ++   + NI   L E+++ + +     F  + +  ++P  +  +  
Sbjct: 138 IALIAVGVFGPMYVNIRDGVRNIDSKLLELAKVYHVKKSTIFISILLRGTLPSFMTGLRF 197

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           ++S  W  +V  E +          GIG  ++ A +      ++  ++       
Sbjct: 198 AISVAWVALVTCETVNSSI------GIGYILSRAQEFFRPDQMMACVIMYAIAGL 246


>gi|238028736|ref|YP_002912967.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
 gi|237877930|gb|ACR30263.1| ABC taurine transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
          Length = 359

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 14/239 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   A    W++     +      V   + LG  +  RV     +A++I IPVG+ 
Sbjct: 131 WVPPLFLPAPAAVWRAFVEAWHGKLQGGVPLAVQLGW-SALRVFSAFALAALIGIPVGLL 189

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G        + P  +     P   + PLVV               +++       I   
Sbjct: 190 MGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGI----DETAKIVVIFLACFAPIAMA 245

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AGA     +    A S   +  +  R+++LP   P  +TG   A G  W   + +E+ 
Sbjct: 246 ARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMV 305

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
           +       T GLG  +  ++       VV+G++++       +   R L   L  +  R
Sbjct: 306 A------ATAGLGQMVLNASSFLRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGR 358



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 84/208 (40%), Gaps = 17/208 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + LR+ SA  ++ L       L   SR    +L P L+  + +P L +L   V++F 
Sbjct: 165 LGWSALRVFSAFALAALIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFG 224

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A I  IF +    +  +         R+    + S   S  Q   ++ 
Sbjct: 225 ID--------ETAKIVVIFLACFAPIAMAARAGARGATREQIAAAWSLGGSAAQVVRHVV 276

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        ++  
Sbjct: 277 LPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDVVVMG 330

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++ +  + + +D   + L R ++ W  +
Sbjct: 331 IVLIGLIAWGFDLAMRALERRLVPWKGR 358


>gi|17986723|ref|NP_539357.1| glycine betaine/L-proline transport system permease protein proW
           [Brucella melitensis bv. 1 str. 16M]
 gi|225853055|ref|YP_002733288.1| choline ABC transporter permease [Brucella melitensis ATCC 23457]
 gi|254694250|ref|ZP_05156078.1| choline ABC transporter, permease protein [Brucella abortus bv. 3
           str. Tulya]
 gi|256045197|ref|ZP_05448096.1| choline ABC transporter, permease protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256114149|ref|ZP_05454903.1| choline ABC transporter, permease protein [Brucella melitensis bv.
           3 str. Ether]
 gi|256263464|ref|ZP_05465996.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260565203|ref|ZP_05835687.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|261214558|ref|ZP_05928839.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|265991631|ref|ZP_06104188.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265995468|ref|ZP_06108025.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|17982347|gb|AAL51621.1| glycine betaine/l-proline transport system permease protein prow
           [Brucella melitensis bv. 1 str. 16M]
 gi|225641420|gb|ACO01334.1| choline ABC transporter, permease protein [Brucella melitensis ATCC
           23457]
 gi|260151271|gb|EEW86365.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260916165|gb|EEX83026.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|262766581|gb|EEZ12370.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|263002415|gb|EEZ14990.1| glycine betaine/L-proline ABC transporter permease [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263093471|gb|EEZ17521.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|326409597|gb|ADZ66662.1| choline ABC transporter permease [Brucella melitensis M28]
 gi|326539301|gb|ADZ87516.1| choline ABC transporter, permease protein [Brucella melitensis
           M5-90]
          Length = 278

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I              S+ + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLSISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                  +     S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 PIRLTQLS----ISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|89896753|ref|YP_520240.1| hypothetical protein DSY4007 [Desulfitobacterium hafniense Y51]
 gi|89336201|dbj|BAE85796.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 270

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L IF +  +    + + +      + +   +D + ++     ++  +        I+ +
Sbjct: 34  LLIIFDYLTLKTGKLPLPYFPWPDKILNAIIEDRVLLLDCIRNSLILLFTGYFFGGIVGL 93

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G+  G+   +   + P  ++L   P+  + P+V+   S            L+  G  +
Sbjct: 94  ITGVTAGWSKKVHYWVMPIIKILGPIPSTTWLPIVLIIASSLFKG----SVFLIALGVWY 149

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    + G +     + EVA +      R    + LP   P    G       A    +
Sbjct: 150 PVTIATLTGVANVRKSYFEVARTLGARQRRLVFKVALPAAMPNIFQGLTQGMSVACTTLM 209

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E+          +GLG YI        F ++   V+++C     +N  L
Sbjct: 210 VAEMMG------VESGLGWYINWQKGWAEFGKMYAAVIVICLTFTVVNIVL 254



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 95/250 (38%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   +++   + +    +     P     +  I  D   L      + + + +      +
Sbjct: 31  VFILLIIFDYLTLKTGKLPLPYFPWPDKILNAIIEDRVLLLDCIRNSLILLFTGYFFGGI 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A  S+++   ++PI+ I+  IP   +L   ++   +L+ G        ++F 
Sbjct: 91  VGLITGVTAGWSKKVHYWVMPIIKILGPIPSTTWLPIVLIIASSLFKG--------SVFL 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T +    + N+ +   EV+R+      +  + + +P +MP +   +   MS
Sbjct: 143 IALGVWYPVTIATLTGVANVRKSYFEVARTLGARQRRLVFKVALPAAMPNIFQGLTQGMS 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
                ++ +EM+ V        G+G YI       +   +  A++ +     + + +L  
Sbjct: 203 VACTTLMVAEMMGVES------GLGWYINWQKGWAEFGKMYAAVIVICLTFTVVNIVLTQ 256

Query: 261 --RPMIVWSN 268
             + ++ W  
Sbjct: 257 VKKRVLRWQE 266


>gi|46203794|ref|ZP_00209125.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 252

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 66/215 (30%), Gaps = 22/215 (10%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGC----------ITMFRVVVLII 395
           W      +A   A  S+G +   F     DV    W             ++  R     +
Sbjct: 37  WLLPTLVIAGWQAAASLGLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAAAGFL 96

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +   I +  G+  G             Q++   P     PLV+                L
Sbjct: 97  VGGGIGLSFGLANGLSNLSEKLTDTTLQMVRNVPHLSLIPLVILWFGI----DEGAKLFL 152

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + I  N + G  +      E+   + +     +  ++LPG  P    G   A G
Sbjct: 153 VALGVFFPIYANTLHGIRSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIFVGIRYALG 212

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             W   IV+E  S        +GLG    ++ E  
Sbjct: 213 IMWLTLIVAETIS------ANSGLGYMAMQAREFM 241



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
              ++ L   +    P D+            L +    +  R  +  ++       +   
Sbjct: 49  AAASLGLVSTRFMPAPLDVAAAGWRLAQTGELWENLWVSFARAAAGFLVGGGIGLSFGLA 108

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S     +    L +++++P L  +   +++F           E A +F +     + 
Sbjct: 109 NGLSNLSEKLTDTTLQMVRNVPHLSLIPLVILWFGID--------EGAKLFLVALGVFFP 160

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    + ++   L E+ R + ++  + FW + +P ++P +   +  ++   W  ++ 
Sbjct: 161 IYANTLHGIRSVDPQLIEMGRVYGMNRRELFWRVVLPGALPSIFVGIRYALGIMWLTLIV 220

Query: 210 SEMIVVGDTVIPLPGIGSYIALA 232
           +E I          G+G     A
Sbjct: 221 AETISANS------GLGYMAMQA 237


>gi|134098793|ref|YP_001104454.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005853|ref|ZP_06563826.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911416|emb|CAM01529.1| glycine betaine transport system permease protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 295

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 96/233 (41%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ I   L   ++        +    + + +   P  A +T   +L A +I+++    
Sbjct: 57  LVMLAIFTALALWLRGWRFALFTLVGFGLVISMREFPP-AMQTLALVLVASIIAVVIAIP 115

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA+ RR+ +V+ P+LD+MQ++P   +L   + +F     G V G     IFA+   
Sbjct: 116 VGILAARHRRVSLVVRPVLDLMQTMPAFVYLIPVIFFF---NIGSVPGVVATVIFALPPG 172

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       +  +  ++ E   +F     +    + +P +MP ++  +   +     
Sbjct: 173 -----VRLTELGIRQVDAEVVEAGEAFGAPPSRILTGIQLPLAMPSIMAGVNQVIMLSLS 227

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + M+          G+G+ +  A+    L A   A + ++ +    D++
Sbjct: 228 MVVIAGMV-------GAEGLGTEVYTAVTRVQLGAGFEAGVAVVILAVYLDRV 273



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 12/233 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGI-AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +++  ++    +   +A+ +  W+   + +  F     +        T+  V+V  IIA 
Sbjct: 51  LTWPPELVMLAIFTALALWLRGWRFALFTLVGFGLVISMREFPPAMQTLALVLVASIIAV 110

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IPVGI       +S  ++P   L+   PA V+   V+   +   +   +   +    
Sbjct: 111 VIAIPVGILAARHRRVSLVVRPVLDLMQTMPAFVYLIPVIFFFNIGSVPGVVATVIF--- 167

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                 +     G      +  E   +F     R    I LP   P  + G       + 
Sbjct: 168 -ALPPGVRLTELGIRQVDAEVVEAGEAFGAPPSRILTGIQLPLAMPSIMAGVNQVIMLSL 226

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +  +++ +           GLG  +  +  +          + +    + L+R
Sbjct: 227 SMVVIAGMVG-------AEGLGTEVYTAVTRVQLGAGFEAGVAVVILAVYLDR 272


>gi|300867324|ref|ZP_07111982.1| ABC transporter, permease protein [Oscillatoria sp. PCC 6506]
 gi|300334678|emb|CBN57148.1| ABC transporter, permease protein [Oscillatoria sp. PCC 6506]
          Length = 265

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 86/250 (34%), Gaps = 15/250 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------ 383
           +  +   ++ + ++  +  F V   ++I      +       T   ++  ++ G      
Sbjct: 12  DVQKFSFDRFLPFIGVLVLFGVWWLISISGFVNPVLLPTPFATLGTLIAGMFTGVMLPDF 71

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R     ++A II +PVG+ +G    +   ++       + PA+   P+ +     
Sbjct: 72  IATVLRTFSAFLMAGIIGVPVGVALGSSEKVYRSVEFLIDFFRSTPASALIPMFILFFGV 131

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      ++  F     I+FN   G           A       WR ++ ++L    
Sbjct: 132 SDFSK----VVIAAFSAFLLIVFNSAYGVINAKQSRILAAKVMGANRWRIFKDVLLLESL 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G  +    +    IV+E+           GLG  I ++ +  +  ++   +L+  
Sbjct: 188 PQTFIGLRSGISISLVIVIVAEMFIGTEQ-----GLGKRIIDAQQVLNVKDMYASILVTG 242

Query: 564 CFVLALNRFL 573
                LN   
Sbjct: 243 ILGYFLNMLF 252



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P I  L+ F +   I             P   +  +   +    +      T LR  
Sbjct: 20  RFLPFIGVLVLFGVWWLISISGFVNPVLLPTPFATLGTLIAGMFTGVMLPDFIATVLRTF 79

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           SA +++ +           S ++   +  ++D  +S P    +   +++F      KV+ 
Sbjct: 80  SAFLMAGIIGVPVGVALGSSEKVYRSVEFLIDFFRSTPASALIPMFILFFGVSDFSKVVI 139

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A  +A   I         F+    + N  +     ++    + W+ F  + +  S+P   
Sbjct: 140 AAFSAFLLI--------VFNSAYGVINAKQSRILAAKVMGANRWRIFKDVLLLESLPQTF 191

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +      G+G  I  A +  ++  +  ++L    + +
Sbjct: 192 IGLRSGISISLVIVIVAEMFIGTEQ-----GLGKRIIDAQQVLNVKDMYASILVTGILGY 246

Query: 254 LYDQLLF---RPMIVWSNK 269
             + L     +  I WS K
Sbjct: 247 FLNMLFLIVEKRFIHWSGK 265


>gi|209552006|ref|YP_002283922.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539599|gb|ACI59530.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 305

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A  T   +L+ ++            AAKS R   VL PILD+MQ+IP   +L   V+
Sbjct: 92  WEPAMTTLSIVLTCVIFCSAVGIPLGIAAAKSERFWTVLRPILDLMQTIPSFVYLVPIVM 151

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G  +  I+A+       +       +  +  D+ E S +F  S  Q   
Sbjct: 152 LFS---IGNVSGVIVTCIYALA-----PVVRLTNLGIRQVRSDMVEASNAFGASKRQTLV 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +MP ++  +  ++            + V  ++I + G+G  +   I   D+   
Sbjct: 204 KVELPLAMPTIMAGVNQTVMLAL-------SMSVVSSMISVTGLGQMVLRGIGRLDMGLA 256

Query: 242 LYAMLTMLGVIFLYDQL 258
               L ++ +  + D++
Sbjct: 257 TVGGLGIVFLAIVIDRI 273



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 86/234 (36%), Gaps = 16/234 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIAS 398
           L      +V  + +GIAWQ+ G  +       +L +  +G       T+  V+  +I  S
Sbjct: 51  LIGAPDLLVYAIIVGIAWQAGGRKLALLCAAALLGIGLMGAWEPAMTTLSIVLTCVIFCS 110

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            + IP+GI         + ++P   L+   P+ V+   +V   S  +++      ++   
Sbjct: 111 AVGIPLGIAAAKSERFWTVLRPILDLMQTIPSFVYLVPIVMLFSIGNVSG----VIVTCI 166

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++     G     +D  E +++F  +  +    + LP   P  + G         
Sbjct: 167 YALAPVVRLTNLGIRQVRSDMVEASNAFGASKRQTLVKVELPLAMPTIMAGVNQT----- 221

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              +++   S     +  TGLG  +     +       +G L +    + ++R 
Sbjct: 222 --VMLALSMSVVSSMISVTGLGQMVLRGIGRLDMGLATVGGLGIVFLAIVIDRI 273


>gi|325289562|ref|YP_004265743.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964963|gb|ADY55742.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 340

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V     ++  +++     ++   +   +   ++ +  GI IG+   +   + P  ++   
Sbjct: 129 VAGVVLEEYAFLLSNTGYSLRLFLCGFLAGIVLGVGTGILIGWFSRVHYWVFPALKITGV 188

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P  ++      +        ++     + + +    G +     + EVA +  
Sbjct: 189 VPAVAWMPFALTIFPTSFM----AGVFIIAISAWFPVAYMTSQGIANTHKVYFEVAKTLG 244

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    + LP   P   TG  TA G A+   ++SE+           GLG YI  + 
Sbjct: 245 AKQSYLLFRVALPNAVPQIFTGISTANGLAFTTLVISEMMG------AKGGLGYYINWAK 298

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              S+ +V   +++M      + + +
Sbjct: 299 AWSSYYKVYAAIIVMAVLFSLIMKLI 324



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 86/246 (34%), Gaps = 14/246 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P    +   +L   +++  L  +     P        +  +   L      +    L
Sbjct: 93  KRAPFRLAMGIVLLAWDLLSTKLDILPMPFFPGPSKVAGVVLEEYAFLLSNTGYSLRLFL 152

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +  ++       L     R+   + P L I   +P + ++ F +  F          
Sbjct: 153 CGFLAGIVLGVGTGILIGWFSRVHYWVFPALKITGVVPAVAWMPFALTIF--------PT 204

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + +A +F I  S  + + +   Q + N  +   EV+++         + + +P ++P + 
Sbjct: 205 SFMAGVFIIAISAWFPVAYMTSQGIANTHKVYFEVAKTLGAKQSYLLFRVALPNAVPQIF 264

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  +    +  +V SEM+          G+G YI  A        +  A++ M  +  
Sbjct: 265 TGISTANGLAFTTLVISEMMGAKG------GLGYYINWAKAWSSYYKVYAAIIVMAVLFS 318

Query: 254 LYDQLL 259
           L  +L+
Sbjct: 319 LIMKLI 324


>gi|58825940|gb|AAD26617.2|AF091716_1 putative ABC MSA transporter membrane-associated permease component
           [Methylosulfonomonas methylovora]
          Length = 300

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 22/204 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R+ +   +A+++ +P+G+ +G+   I     P  + L   P   + PL +   S 
Sbjct: 102 YVSCRRIAIAFFLATLLGVPLGLLMGWSKTIKDYTFPVLETLRPIPIMAWVPLAILMFSG 161

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR----WWRYIIL 499
           Y       +  L    + +    N + G  +    +   A       W     WW     
Sbjct: 162 YET----PVIFLATLASFFATTLNTMLGVQSIDESYFRAAGCLGSKKWTSSAMWWC---- 213

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
            G     + G   + G AW + + +E+ S         GLG  I  +        +V+G+
Sbjct: 214 -GRIALDLHGLQISIGVAWFSLVAAEMVSGD------FGLGYMILSAYVNSVTVPMVIGM 266

Query: 560 LIMCCFV---LALNRFLWHPLYLY 580
           L +        AL R++ + L  +
Sbjct: 267 LTLGFVGWFSSALVRWVGNRLMQW 290



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 24/213 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   +  R+  A  ++ L       L   S+ +     P+L+ ++ IPI+ ++   ++ 
Sbjct: 99  EHIYVSCRRIAIAFFLATLLGVPLGLLMGWSKTIKDYTFPVLETLRPIPIMAWVPLAILM 158

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ---K 179
           F         G E   IF    +  +  T +    + +I       +       W     
Sbjct: 159 FS--------GYETPVIFLATLASFFATTLNTMLGVQSIDESYFRAAGCLGSKKWTSSAM 210

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +W   +   + GL     +S+   WF +VA+EM+          G+G  I  A      +
Sbjct: 211 WWCGRIALDLHGL----QISIGVAWFSLVAAEMVSG------DFGLGYMILSAYVNSVTV 260

Query: 240 AILYAMLTMLGVI---FLYDQLLFRPMIVWSNK 269
            ++  MLT+  V        + +   ++ W  K
Sbjct: 261 PMVIGMLTLGFVGWFSSALVRWVGNRLMQWHVK 293


>gi|240136996|ref|YP_002961465.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
 gi|240006962|gb|ACS38188.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Methylobacterium extorquens AM1]
          Length = 279

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 91/240 (37%), Gaps = 17/240 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +   L   +    P  +   +        L  +   T +R+            +   L A
Sbjct: 48  VAAGLASGRLLPPPSRVTAALWTLAASGELWTHVEATLIRVGLGFAFGAGAGILAGALTA 107

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
               L  ++ P L  ++++P L ++   +++F  L   KV    +   F ++        
Sbjct: 108 TLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGILETPKVALIAVGVFFPVY-------- 159

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA+E
Sbjct: 160 IGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLPATLTALRTGLGLGFLFVVAAE 219

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
           ++   +      G+G  +    +      IL A+++   V    D     L  P++ W +
Sbjct: 220 LMGASE------GLGYLLLDGQQFSKPDQILAAIISFAVVGKAADAGLVALTSPLVRWQD 273



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV +     +   I  G      P +   + P  Q L A P+  + PL +      
Sbjct: 83  ATLIRVGLGFAFGAGAGILAGALTATLPTLRWLVDPSLQALRAVPSLAWVPLFILWFGIL 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+  G  + +   V    ++      EV   F ++     R I+LP + P
Sbjct: 143 ET----PKVALIAVGVFFPVYIGVAGAIASVDRKLVEVGRIFRLSKVALARRILLPAVLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T   T  G  +   + +E+         + GLG  + +  +     +++  ++    
Sbjct: 199 ATLTALRTGLGLGFLFVVAAELMG------ASEGLGYLLLDGQQFSKPDQILAAIISFAV 252

Query: 565 FVLALN 570
              A +
Sbjct: 253 VGKAAD 258


>gi|170735887|ref|YP_001777147.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169818075|gb|ACA92657.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 271

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 18/254 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLP 62
           P    RR+    +      L        L             P D++          +L 
Sbjct: 12  PATADRRLHVPDWRGFVLPLAALACWWALASAHLMKSGLFVSPADVLHTAWAQATSGALG 71

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  S +  R      I      +   +   SR    ++ P  D  + I +  ++    V+
Sbjct: 72  RALSASLAREACGFAIGATGGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVW 131

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+   LAA+  +               +  +PR   +V+R+ R S  Q   Y
Sbjct: 132 FGLGDVAKVVFLSLAALLPVAAHTC--------DGIHAVPRTYVDVARALRYSRLQLIRY 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W   + +E ++V  +     GIG+ +    ++  +  +L
Sbjct: 184 VILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVL 238

Query: 243 YAMLTMLGVIFLYD 256
           + ++ +    +  +
Sbjct: 239 FGIIVVGVTGWALN 252



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 9/186 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R      I +   + +G  +G     +  + P            + PL+       
Sbjct: 76  ASLAREACGFAIGATGGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVWFGLG 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   ++LS          +  +   G  A P  + +VA +   +  +  RY+ILP   P
Sbjct: 136 DVAKVVFLS----LAALLPVAAHTCDGIHAVPRTYVDVARALRYSRLQLIRYVILPAALP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       +W A++ +E        +  +G+G  + + +E+     V+ G++++  
Sbjct: 192 SIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGIIVVGV 246

Query: 565 FVLALN 570
              ALN
Sbjct: 247 TGWALN 252


>gi|256392959|ref|YP_003114523.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Catenulispora acidiphila DSM 44928]
 gi|256359185|gb|ACU72682.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 282

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 77/243 (31%), Gaps = 22/243 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------------LYVIWLGCITM 387
              +   FW      V + +     G+I                       ++     ++
Sbjct: 31  GPRIRFAFWIGPALLVTVWVVGSLTGFITPQVLTAPWDVAKEFGDQWTHHDLLGNITASL 90

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R    + + +     + +  G      + I    Q+  A P     PL V+        
Sbjct: 91  RRAGYGLALGTAAGFLLALASGLSRLGEAVIDGPIQIKRAIPTLALIPLFVAWFGIG--- 147

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 + +   +   I  N   G       + E+A +  I    + R+++LPG  P ++
Sbjct: 148 -EQMKIITIGLISMIPIYINTHNGLRGIDGRYAELAETLDIRRGTFLRHVVLPGALPGFL 206

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   A   A    +V E       +   +G+G  +  + E G    +V+G+++   +  
Sbjct: 207 LGLRFAVTAAMLGLVVVE------QYNSLSGIGHMMTLAQEYGQTSVIVVGLVLYGFYGF 260

Query: 568 ALN 570
             +
Sbjct: 261 LAD 263



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 87/252 (34%), Gaps = 18/252 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
                  V V  + ++      +  T P D+          H L    + +  R    + 
Sbjct: 39  WIGPALLVTVWVVGSLTGFITPQVLTAPWDVAKEFGDQWTHHDLLGNITASLRRAGYGLA 98

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +     F+ A  +  SR    V+   + I ++IP L  +   V +F           E  
Sbjct: 99  LGTAAGFLLALASGLSRLGEAVIDGPIQIKRAIPTLALIPLFVAWFGIG--------EQM 150

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I    +  +  + +  L  I     E++ +  +       ++ +P ++PG +  + 
Sbjct: 151 KIITIGLISMIPIYINTHNGLRGIDGRYAELAETLDIRRGTFLRHVVLPGALPGFLLGLR 210

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
            +++     +V  E          L GIG  + LA +      I+  ++      FL D 
Sbjct: 211 FAVTAAMLGLVVVE------QYNSLSGIGHMMTLAQEYGQTSVIVVGLVLYGFYGFLADA 264

Query: 257 --QLLFRPMIVW 266
             +L+ R  + W
Sbjct: 265 AVRLVERKALSW 276


>gi|269839255|ref|YP_003323947.1| binding-protein-dependent transporters inner membrane component
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269790985|gb|ACZ43125.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 259

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 99/253 (39%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +LV   +    +   +    P  ++      L+   L    + +  R L    +   
Sbjct: 19  VVLLLVWEALGWAGVLPARILPPPSRVLLAAWKLLESGQLVNDMAVSARRALLGFALGGG 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   +   S  L  +L   L ++++IP L  +   +++F     GK+        F 
Sbjct: 79  LGFVLGVVNGLSSTLSRLLDSTLQMIRNIPHLALIPLVILWFGIGEQGKL--------FL 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  + Y  + N+   L E+ + + LS W+ F  + +P ++P ++  +  ++ 
Sbjct: 131 VAEGVLFPVYVNTYHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +      ++  +L    +  L D   +L
Sbjct: 191 VMWLTLIVAETIAASS------GIGYITMQAREFMQTDVLVMGILLYAALGKLADTVARL 244

Query: 259 LFRPMIVWSNKFR 271
           L R M+ W   ++
Sbjct: 245 LERQMLRWHPAYQ 257



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 19/182 (10%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G    +S  +    Q++   P     PLV+                L+  G  + +  N 
Sbjct: 88  GLSSTLSRLLDSTLQMIRNIPHLALIPLVILWFGIGEQGK----LFLVAEGVLFPVYVNT 143

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G     +   E+   + ++ W  +R I+LPG  P  + G   A G  W   IV+E  +
Sbjct: 144 YHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALGVMWLTLIVAETIA 203

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFL------WHPLYL 579
                  ++G+G    ++ E      +V+G+L+        +   R L      WHP Y 
Sbjct: 204 ------ASSGIGYITMQAREFMQTDVLVMGILLYAALGKLADTVARLLERQMLRWHPAYQ 257

Query: 580 YG 581
             
Sbjct: 258 KA 259


>gi|76787841|ref|YP_330659.1| glycine betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein [Streptococcus
           agalactiae A909]
 gi|77405087|ref|ZP_00782186.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
 gi|77408157|ref|ZP_00784903.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|76562898|gb|ABA45482.1| glycine betaine/carnitine/choline ABC transporter,
           permease/substrate-binding protein [Streptococcus
           agalactiae A909]
 gi|77173257|gb|EAO76380.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|77176230|gb|EAO79000.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
 gi|319746147|gb|EFV98420.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus agalactiae ATCC 13813]
          Length = 504

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 74/178 (41%), Gaps = 21/178 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               + +  +++  V++ I  I Q+IP L  L   + +             + A+ A+  
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG--------TVPAVVALII 90

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  +   +L  I  +L E + +F ++ W++     +  SMP ++  +        
Sbjct: 91  YALFPILQNTVTALMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIR------- 143

Query: 205 FFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               AS MI+   T   +I   G+GS+I L I   +   IL   ++   +  ++  L+
Sbjct: 144 ---TASVMIIGTATLASLIGAGGLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLI 198



 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI I     IS  +     +    P+     L +  +        +   + +I    +
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG----TVPAVVALIIYALF 94

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N +        +  E A++F +T W   +   L    P  ++G  TA       + 
Sbjct: 95  PILQNTVTALMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTAT 154

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +   G       GLG++I    ++ +   +++G +      +  +  +
Sbjct: 155 LASLIGAG-------GLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLI 198


>gi|289705654|ref|ZP_06502039.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557602|gb|EFD50908.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 307

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 99/251 (39%), Gaps = 11/251 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+   +  ++  V +  +   L     E  T P D++           + Q  + +  R 
Sbjct: 51  RVLLPVAAVVLLVAIWQVAAWLAGARGEPITGPGDVLGAFGTLWAQGLVQQAVATSVGRA 110

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +    ++++       L  +   L     P+L  +  +P + ++   V++F         
Sbjct: 111 VVGFALAVVVGVGLGLLLGQVGVLRRAFGPLLTALMVLPNVAWVPLAVLWFGL------- 163

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            ++  A F + T  V  +   +      +P  L   +R    S  +    + +P ++P  
Sbjct: 164 -SDATAYFVMLTGAVPAVVAGLTTGTDQVPPQLRRAARVLGASRLETALLVVLPAALPAF 222

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  +    +  W  ++A+E+I VG  +    G+G+ +     E DL  +L A+LT+L V 
Sbjct: 223 VSGLRQGWAFAWRGLMAAEIIAVGGPMGV--GLGTLLHQGRAESDLAVVLCAVLTILAVG 280

Query: 253 FLYDQLLFRPM 263
            L +   F P+
Sbjct: 281 VLVELTAFGPV 291



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 16/268 (5%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +++L   L  ++         L        +L +    ++  +    AW +         
Sbjct: 23  LRELDSGLDALQAVDSTRRTGLAGWDWSRVLLPVAAVVLLVAIWQVAAWLAGARGEPITG 82

Query: 373 YQDVLYVIW----------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
             DVL                  ++ R VV   +A ++ + +G+ +G    +     P  
Sbjct: 83  PGDVLGAFGTLWAQGLVQQAVATSVGRAVVGFALAVVVGVGLGLLLGQVGVLRRAFGPLL 142

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L   P   + PL V                +M+ G    ++  +  G    P   +  
Sbjct: 143 TALMVLPNVAWVPLAVLWFGLSDAT----AYFVMLTGAVPAVVAGLTTGTDQVPPQLRRA 198

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A     +       ++LP   P +V+G       AW   + +E+ + G       GLG  
Sbjct: 199 ARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEIIAVGGPMGV--GLGTL 256

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +   +     V+  VL +    + + 
Sbjct: 257 LHQGRAESDLAVVLCAVLTILAVGVLVE 284


>gi|317127949|ref|YP_004094231.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472897|gb|ADU29500.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 276

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 18/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    +  ++ ++L  I    +P  +        D   L  ++  T   +L    +SL+
Sbjct: 33  LIGIATIWQVLTVVLE-IPRYLLPSPLDITERFIRDFSVLFSHSITTISEVLLGFGLSLV 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A     S+ L   L PIL  +Q IP++      V++F      KV+ A L + F 
Sbjct: 92  IGIPLAISIVYSKYLANSLYPILIGIQCIPMVSIAPILVIWFGYGLTTKVLLACLISFF- 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +       + +D+  + RS  +S W+ F+YL +P ++P L     + ++
Sbjct: 151 -------PIVINAVVGFRALDKDMHNLGRSIGISEWKIFYYLRLPNALPHLFGGFKVGIT 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                VV +   +VG+ V    G+G     A    D   +   +  +  +  L      L
Sbjct: 204 LA---VVGA---IVGEFVASERGLGYLQLTANARLDTTLVFATLFALAIIGMLLFGIVHL 257

Query: 259 LFRPMIVW 266
           + R M+ W
Sbjct: 258 IERMMMPW 265



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 84/247 (34%), Gaps = 16/247 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWL 382
           E   +  S  R  + +            + +  +   Y++           +D   +   
Sbjct: 15  EKTKRSVSIPRSVWAILTLIGIATIWQVLTVVLEIPRYLLPSPLDITERFIRDFSVLFSH 74

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V++   ++ +I IP+ I I +  ++++ + P    +   P     P++V    
Sbjct: 75  SITTISEVLLGFGLSLVIGIPLAISIVYSKYLANSLYPILIGIQCIPMVSIAPILVIWFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y          LL    + + I+ N + G  A   D   +  S  I+ W+ + Y+ LP  
Sbjct: 135 YGLTTK----VLLACLISFFPIVINAVVGFRALDKDMHNLGRSIGISEWKIFYYLRLPNA 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+   G       A   +IV E  +         GLG     +  +     V   +  +
Sbjct: 191 LPHLFGGFKVGITLAVVGAIVGEFVA------SERGLGYLQLTANARLDTTLVFATLFAL 244

Query: 563 CCFVLAL 569
               + L
Sbjct: 245 AIIGMLL 251


>gi|209550403|ref|YP_002282320.1| choline ABC transporter permease [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536159|gb|ACI56094.1| choline ABC transporter, permease protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 281

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L++  +S++        AA+   +   + P LD+MQ+IP   +L   ++
Sbjct: 90  WKETTETLALVLASTFVSMVIGIPLGIAAARRAWIYAAMRPALDLMQTIPTFVYLIPALI 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     IFAI               + + P  L E + +F     Q   
Sbjct: 150 LFGL---GMVPGLIATVIFAIPAP-----IRLTRLGIISTPPSLVEAAVAFGARPMQVLR 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +PF+ P ++  +  ++      VV + ++          G+G  +  A+   ++   
Sbjct: 202 KVELPFAAPQIMAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRALNTVNVAKG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ +  + D++ 
Sbjct: 255 FEAGLCIVILAIILDRMF 272



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    ++ +I IP+GI    R  I + ++P   L+   P  V+    +       
Sbjct: 96  TLALVLASTFVSMVIGIPLGIAAARRAWIYAAMRPALDLMQTIPTFVYLIPALILFGLGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      I      G  + P    E A +F     +  R + LP   P 
Sbjct: 156 VPGLIATVIFAIPA---PIRL-TRLGIISTPPSLVEAAVAFGARPMQVLRKVELPFAAPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +  +     L +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------ADGLGVPVVRALNTVNVAKGFEAGLCIVIL 264

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 265 AIILDRMF 272


>gi|168071003|ref|XP_001787018.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659923|gb|EDQ48168.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 293

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 12/164 (7%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++   P     PL +                L+  G  + +  N   G  +      E+ 
Sbjct: 1   MIRNIPLFALLPLFIIWFGIG----EEIKLALVSLGVFFPVYLNTFHGIRSVDPGLIEMG 56

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + ++    + +I+LPG  P  + G   A G  W   IV+E  +         G+G   
Sbjct: 57  KVYRMSRRSLYAHIVLPGALPSILVGVRYALGITWLVLIVAETVA------ADAGIGYMA 110

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR-CLR 586
             + E      +VL ++I        +      L     R  LR
Sbjct: 111 MNAREFFQLDVIVLSIVIYALLGKLSDSLA-KRLEKRKERNRLR 153



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 86/249 (34%), Gaps = 26/249 (10%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++++IP+   L   +++F      K+    L   F ++         + +  + ++   L
Sbjct: 1   MIRNIPLFALLPLFIIWFGIGEEIKLALVSLGVFFPVY--------LNTFHGIRSVDPGL 52

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E+ + +R+S    + ++ +P ++P ++  +  ++   W  ++ +E +          GI
Sbjct: 53  IEMGKVYRMSRRSLYAHIVLPGALPSILVGVRYALGITWLVLIVAETVA------ADAGI 106

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY------ 279
           G     A +   L  I+ +++    +  L D L  + +     + RL             
Sbjct: 107 GYMAMNAREFFQLDVIVLSIVIYALLGKLSDSL-AKRLEKRKERNRLRAPPARNVVRRKA 165

Query: 280 -PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC----RTLGVIRFHFPENFLQL 334
            P  +  +   R+    R          +P             R  G  R      + + 
Sbjct: 166 GPVGAEPVGEIRRVRSGRRKERLRQEHAAPACRGASAAFAGRDRLGGGARLRHAGIYPRP 225

Query: 335 CSNQRVSYM 343
               + + +
Sbjct: 226 VPGSKAAPL 234


>gi|229488422|ref|ZP_04382288.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
 gi|229323926|gb|EEN89681.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
          Length = 285

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L  ++I +    +          L  +L P L  ++++P L +    V
Sbjct: 87  LWEHLYMTLRRVLVGVIIGVGLGVILGLAMGSVTWLRSLLEPWLTFLRALPPLAYFFLLV 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S  Q  
Sbjct: 147 IWLGIDEAPKITLLALAALPPAAVATTAAVVAAPVG--------LVEAARALGASRAQVI 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P     + +S+   +  VVA+E+         +PGIG  +  A    +   
Sbjct: 199 RDVVVPSALPETFTGIRLSVGMAYSSVVAAELF------NGIPGIGGMVKDASNYNNTPV 252

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  +  +     + D LL    R  + W  K
Sbjct: 253 VLVGIFAIGFSGLIIDGLLRAAERRAVPWRGK 284



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 98/270 (36%), Gaps = 25/270 (9%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-- 376
           ++          +    +   +  +  I +  +    A    W           +     
Sbjct: 12  SVTEPNREPRRPWTSSATTVGLPVLSVIAFLALWQVAAASGTWSETFVPFPSTVWHAFVN 71

Query: 377 ------------LYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
                        Y++W    +T+ RV+V +II   + + +G+ +G    + S ++P+  
Sbjct: 72  TMTTHDGVRGYQGYLLWEHLYMTLRRVLVGVIIGVGLGVILGLAMGSVTWLRSLLEPWLT 131

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L A P   +F L+V  +          L+L  +            A   A P    E A
Sbjct: 132 FLRALPPLAYFFLLVIWLGIDEAPKITLLALAALPPAA----VATTAAVVAAPVGLVEAA 187

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   +  +  R +++P   P   TG   + G A+++ + +E+ +         G+G  +
Sbjct: 188 RALGASRAQVIRDVVVPSALPETFTGIRLSVGMAYSSVVAAELFNG------IPGIGGMV 241

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +++   + P V++G+  +    L ++  L
Sbjct: 242 KDASNYNNTPVVLVGIFAIGFSGLIIDGLL 271


>gi|227113792|ref|ZP_03827448.1| ABC transporter protein, membrane protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 254

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 17/251 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCG-----VAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            +++           +L +FW   V       + +    +++GY+   F    +   I  
Sbjct: 2   RQHWTSKLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVETLGYMFQSFADAGMRTDIG- 60

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T++R +V    A++I +P+GI +G    I   ++       + P++   PL +    
Sbjct: 61  --ATLYRTLVAFGFAALIGVPLGIILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFG 118

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               N     +   +      ILFN   G           A    I+ W  ++ I+L   
Sbjct: 119 ITDANKIAISAFAAVLV----ILFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLES 174

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                 G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI 
Sbjct: 175 LAQTFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQVFNIRDMYASILIT 229

Query: 563 CCFVLALNRFL 573
                 LN   
Sbjct: 230 GALGYLLNVLF 240



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 93/259 (35%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +  +L F+     ++           P + +  +  +     +      T  R L
Sbjct: 8   KLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVETLGYMFQSFADAGMRTDIGATLYRTL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A   + L       +   + ++   L  ++D  +S P    +   ++ F      K+  
Sbjct: 68  VAFGFAALIGVPLGIILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITDANKIAI 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  AA+  I         F+    + N  +     ++   +S W  F  + +  S+    
Sbjct: 128 SAFAAVLVI--------LFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQTF 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +T     G+G  I  A +  ++  +  ++L    + +
Sbjct: 180 VGLRTGVSMALVIVIVAEMFIGSET-----GLGHRIIDAQQVFNIRDMYASILITGALGY 234

Query: 254 LYDQLLF---RPMIVWSNK 269
           L + L     + ++ WS K
Sbjct: 235 LLNVLFLVVEKRIVHWSGK 253


>gi|86360062|ref|YP_471951.1| taurine uptake ABC transporter, permease protein [Rhizobium etli
           CFN 42]
 gi|86284164|gb|ABC93224.1| probable taurine uptake ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 261

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR+VV  +IA    IP+G+ +G        +    +     P   + PL++  +  
Sbjct: 68  AASLFRIVVAALIAITAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++      I  +  AG  + P +    A S      + +  I+LP   
Sbjct: 128 GETSK----ITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGANRLQLFIDIVLPSAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W+  + +E+ +       T G+G  I  +++  +   V +G+ I+ 
Sbjct: 184 PEILTGIRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIAIIA 237

Query: 564 CFVLAL 569
                 
Sbjct: 238 ACAFTF 243



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL ++ + +  R++ A +I++        L   +R    VL   ++    +P L +L  
Sbjct: 61  ASLSEHVAASLFRIVVAALIAITAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +  +    +  S    + ++P +    +RS   +  Q
Sbjct: 121 MIIWLGIG--------ETSKITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGANRLQ 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + +++  GW  +VA+E+I          GIG  I  A +    
Sbjct: 173 LFIDIVLPSALPEILTGIRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLAT 226

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             +   +  +    F +    + L   ++ W  K
Sbjct: 227 DVVFVGIAIIAACAFTFSAAIRFLETCLVPWKGK 260


>gi|325293639|ref|YP_004279503.1| proline/glycine/betaine ABC transporter transmembrane protein
           [Agrobacterium sp. H13-3]
 gi|325061492|gb|ADY65183.1| proline/glycine/betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 283

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            V+V  +  +     +   +P      +   +++    +  + T   +L++  + ++   
Sbjct: 56  LVIVAIVTALSAWTRRSVGMPVFTALGLLFIINLGY-WKATTETLALVLASSAVCMIIGI 114

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               LAA+ + +   + P+LD+MQ+IP   +L   +V F     G V G     IFAI  
Sbjct: 115 PLGILAARRKWIYAGMRPVLDLMQTIPTFVYLIPALVLFGL---GMVPGLIATVIFAIPA 171

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        + + P  L E + +F  +  Q    + +PF+ P ++  +  ++    
Sbjct: 172 P-----VRLTRLGIVSTPPALVEAAIAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSL 226

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV S ++          G+G  +  A+   ++     A L ++ +  + D+L 
Sbjct: 227 SMVVISALVGAN-------GLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLF 274



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 16/233 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
             +V  V    AW      +  FT   +L++I LG       T+  V+    +  II IP
Sbjct: 56  LVIVAIVTALSAWTRRSVGMPVFTALGLLFIINLGYWKATTETLALVLASSAVCMIIGIP 115

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    R  I + ++P   L+   P  V+    +       +   +   +  I      
Sbjct: 116 LGILAARRKWIYAGMRPVLDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRL 175

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G  + P    E A +F  T  +  R + LP   P  + G       + +  ++
Sbjct: 176 ----TRLGIVSTPPALVEAAIAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVI 231

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           S +           GLG  +  +    +        L +    + L+R    P
Sbjct: 232 SALVG-------ANGLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLFRLP 277


>gi|325292826|ref|YP_004278690.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060679|gb|ADY64370.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 258

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I  +    T+           IT+   V+  +I + + +  G+W+G  P ++  + PF +
Sbjct: 39  IDIVKQVITWVADAGFYKHVGITLSETVLGYLIGTGLGVGAGVWLGLSPFVARVLDPFIK 98

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + A P  V  P+ V  +     +       L+ F T     FN + G            
Sbjct: 99  AVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF----FNAMQGVREVNPVVLSNT 154

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                      R++  P    + ++   T+ G A   +I+ E          + GLG  I
Sbjct: 155 RILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG------SSAGLGYLI 208

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A S        V  G++I+  FVL ++  L
Sbjct: 209 ARSEGNFDAVGVFAGIIILAIFVLVIDLIL 238



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 81/237 (34%), Gaps = 17/237 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DIV  V   +      ++   T    +   +I              S  +  VL P
Sbjct: 36  PAPIDIVKQVITWVADAGFYKHVGITLSETVLGYLIGTGLGVGAGVWLGLSPFVARVLDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKAVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R           ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVG---FAVVGA---IIGEYLGSS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRLERTT 276
            G+G  IA +    D + +   ++ +   + + D +L    R +I W      ER  
Sbjct: 202 AGLGYLIARSEGNFDAVGVFAGIIILAIFVLVIDLILDVAERKLITWRPNAGEERPA 258


>gi|256160302|ref|ZP_05457996.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti M490/95/1]
 gi|256255506|ref|ZP_05461042.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella ceti B1/94]
 gi|261222715|ref|ZP_05936996.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|265998679|ref|ZP_06111236.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti
           M490/95/1]
 gi|260921299|gb|EEX87952.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|262553303|gb|EEZ09137.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti
           M490/95/1]
          Length = 278

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|317154923|ref|YP_004122971.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316945174|gb|ADU64225.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 279

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 25/250 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIG---------YIVNHFTYQDVLYVIWLGCI---- 385
           R + M  I W  ++  VAI  AW+ +          +         ++ +   G +    
Sbjct: 2   RRADMRRINWHGIMFCVAIAAAWELLSTLQIVSPRLFPPLSLILSHLIDLTVSGTLPQVL 61

Query: 386 --TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R++  +I AS++ +P+GIW G    +   I P  + L + P  +     +  +  
Sbjct: 62  AQTLLRMLAGLIAASVVMVPLGIWAGRSQRLWLLISPTVESLRSLPPALVILPAMLLLGI 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N      + F   + +L N + G  A P  F + A +           +++P   
Sbjct: 122 G----NSMKIFAVFFAAAFPLLLNTMDGVRAIPLMFIDTARTLRTGNRTMLFEVVVPAAA 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   +G  +A   A+  +I++E+         T G+G ++ +S      P++        
Sbjct: 178 PGIFSGLKSAVPIAFIVAILAEMIGG------TDGIGHFLMKSQRSFDIPQMYAATFATA 231

Query: 564 CFVLALNRFL 573
                L   L
Sbjct: 232 VGGGVLAVIL 241



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 98/239 (41%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
            +A      +++ L         P  ++    I L V  +LPQ  ++T LRML+ ++ + 
Sbjct: 17  CVAIAAAWELLSTLQIVSPRLFPPLSLILSHLIDLTVSGTLPQVLAQTLLRMLAGLIAAS 76

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        A +S+RL +++ P ++ ++S+P    +   ++        K        IF
Sbjct: 77  VVMVPLGIWAGRSQRLWLLISPTVESLRSLPPALVILPAMLLLGIGNSMK--------IF 128

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F +  + +  +    +  IP    + +R+ R       + + VP + PG+   +  ++
Sbjct: 129 AVFFAAAFPLLLNTMDGVRAIPLMFIDTARTLRTGNRTMLFEVVVPAAAPGIFSGLKSAV 188

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   + +EMI   D      GIG ++  + +  D+  +  A         +   +L
Sbjct: 189 PIAFIVAILAEMIGGTD------GIGHFLMKSQRSFDIPQMYAATFATAVGGGVLAVIL 241


>gi|171322196|ref|ZP_02911047.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171092488|gb|EDT37823.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 363

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++    F   +  +  L      +    P    +L   +     L      + 
Sbjct: 69  RVVGFTDWAYTESFGTAAWTIAALLLIAATLSHRVPATRARLARVRPAGPWLVALPLVLA 128

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 129 AWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLKLLALGFAYGVAVGFAVG 188

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 189 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS----AAAFLIALSTGFPVA 244

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 245 VLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 304

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 305 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 347



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A  T  
Sbjct: 112 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLK 171

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 172 LLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 224

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  S  + +    +  + ++ R   +V+R+   +       + +P ++P
Sbjct: 225 -PTSYSAAAFLIALSTGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALP 283

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 284 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 337

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 338 LFSGLIALLF 347


>gi|148555426|ref|YP_001263008.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
 gi|148500616|gb|ABQ68870.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
          Length = 266

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 92/234 (39%), Gaps = 17/234 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
                 P  ++  +   +    LP   + +  R++S + I +        +A  SR+   
Sbjct: 43  GHTLAAPSAVLATLFAMIRSGELPSNLAVSFWRVVSGLGIGVALGVSLGLVAGLSRQGEA 102

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           ++ P++ I ++IP++      +V+F      K        I  I  + ++ +  ++Y  +
Sbjct: 103 LVDPLMQIKRTIPVVALAPLFIVWFGIGETPK--------IALIAFAAMFPLYLNLYNGI 154

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             + + L E + SF L+  Q   ++ +P ++P L+  +  +++     +V +E I     
Sbjct: 155 RGVDKRLVEGALSFGLTRRQLIVHVILPGALPSLLVGLRYALTISIVMLVIAEQINASA- 213

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIVWSNK 269
                G+G  +  A        I+  ++          L  +++    + W  K
Sbjct: 214 -----GLGFLVNNARDFMRTDIIVVCLMVYALLGLAADLLVRIVETRALAWRPK 262



 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 13/213 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             ++ G  +      +  +       ++   +    ++ +RVV  + I   + + +G+  
Sbjct: 38  AGLIPGHTLAAPSAVLATLFAMIRSGELPSNL---AVSFWRVVSGLGIGVALGVSLGLVA 94

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G      + + P  Q+    P     PL +                L+ F   + +  N+
Sbjct: 95  GLSRQGEALVDPLMQIKRTIPVVALAPLFIVWFGIGET----PKIALIAFAAMFPLYLNL 150

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E A SF +T  +   ++ILPG  P  + G   A   +    +++E  +
Sbjct: 151 YNGIRGVDKRLVEGALSFGLTRRQLIVHVILPGALPSLLVGLRYALTISIVMLVIAEQIN 210

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                  + GLG  +  + +      +V+ +++
Sbjct: 211 ------ASAGLGFLVNNARDFMRTDIIVVCLMV 237


>gi|126668758|ref|ZP_01739707.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Marinobacter sp. ELB17]
 gi|126626795|gb|EAZ97443.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Marinobacter sp. ELB17]
          Length = 254

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 22/263 (8%)

Query: 12  SRRIFPNIFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           SRR   +   L+AFVL+    + + LL G     +P  I  +    L           + 
Sbjct: 8   SRRSLLSAAGLVAFVLLWELALRSGLLPGSL-VPLPSSIPQVFWYELIDGIWLDVVRSSL 66

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +     +++           AA   R   +   +  +++ IP L ++ F +++F      
Sbjct: 67  VHYSVGLLLGSSLGITVGVAAALLPRFDALHAWLARLLRPIPPLAWIPFAIIWFGIN--- 123

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW-QKFWYLGVPFS 188
                  AA F I     W   F+ Y ++ +I    +EV+++F    +  +   + +P +
Sbjct: 124 -----PSAAAFIISIGVFWINYFASYSAVHSIDPSFDEVAQAFGQRRFLSRLTKVNLPAA 178

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG++  +   +  GW  VVA+E+         +PGIG  +  A        ++  MLT+
Sbjct: 179 APGILGGLRAGLGQGWMTVVAAELF-------GIPGIGQRMMEASSLLATDIVVVYMLTI 231

Query: 249 LGVIFLYDQLLF---RPMIVWSN 268
            G+  L+D L     R ++ W  
Sbjct: 232 AGLYALFDFLFMLIQRRLLRWQP 254



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 17/257 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TM 387
              +   +        + W   +    +  +   +   +    + +++  IWL  +  ++
Sbjct: 7   RSRRSLLSAAGLVAFVLLWELALRSGLLPGSLVPLPSSIPQVFWYELIDGIWLDVVRSSL 66

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
               V +++ S + I VG+     P   +     A+LL   P   + P  +         
Sbjct: 67  VHYSVGLLLGSSLGITVGVAAALLPRFDALHAWLARLLRPIPPLAWIPFAIIWFGI---- 122

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYY 506
                + ++  G  W   F   +   +    F EVA +F    +      + LP   P  
Sbjct: 123 NPSAAAFIISIGVFWINYFASYSAVHSIDPSFDEVAQAFGQRRFLSRLTKVNLPAAAPGI 182

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G     G  W   + +E+           G+G  + E++   +   VV+ +L +    
Sbjct: 183 LGGLRAGLGQGWMTVVAAELFGI-------PGIGQRMMEASSLLATDIVVVYMLTIAGLY 235

Query: 567 LALN---RFLWHPLYLY 580
              +     +   L  +
Sbjct: 236 ALFDFLFMLIQRRLLRW 252


>gi|258542054|ref|YP_003187487.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633132|dbj|BAH99107.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636189|dbj|BAI02158.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639244|dbj|BAI05206.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642298|dbj|BAI08253.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645353|dbj|BAI11301.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648408|dbj|BAI14349.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256651461|dbj|BAI17395.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654452|dbj|BAI20379.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 254

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 16/198 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q    +    L  ++I  +       L      +  +L  I+ +++ +P L ++ F +++
Sbjct: 60  QAILDSLHHYLLGLLIGSVLGAGLGILCGMVAVVDGLLEGIVRLLRPVPGLAWVPFAILW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFW 181
           F     G        A F I  S  W   ++ + ++  +  +L E++ +F   G + + +
Sbjct: 120 FGLNTSG--------ATFVIAISVFWINFYAAHSAVRGVDPELYELAAAFGHGGFFGRLF 171

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + PGL+  +   +  GW  VVA+E+  V       PGIG+ +  A        +
Sbjct: 172 KVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-------PGIGARMMQASSLLATDVV 224

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  MLTM  +  + D L 
Sbjct: 225 VVYMLTMALLYAVTDFLF 242



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 14/209 (6%)

Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +      +V    W   I  ++   ++ ++I S++   +GI  G    +   ++   +LL
Sbjct: 45  LGPAWLDEVRGGFWQQAILDSLHHYLLGLLIGSVLGAGLGILCGMVAVVDGLLEGIVRLL 104

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P  +              + ++     W   +   +       +  E+A++
Sbjct: 105 RPVPGLAWVPFAILWFGL----NTSGATFVIAISVFWINFYAAHSAVRGVDPELYELAAA 160

Query: 486 FHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           F   G +     ++LP   P  ++G  T  G  W + + +E+           G+GA + 
Sbjct: 161 FGHGGFFGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFG-------VPGIGARMM 213

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +++   +   VV+ +L M       +   
Sbjct: 214 QASSLLATDVVVVYMLTMALLYAVTDFLF 242


>gi|218885624|ref|YP_002434945.1| ABC transporter inner membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756578|gb|ACL07477.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 265

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 66/191 (34%), Gaps = 14/191 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++        +A  + +P+G+ +G+        +P  +++   P   + PL +      
Sbjct: 74  VSIQEAFGGYFLALAVGLPLGLAMGWFNVAEGLARPIFEIIRPIPPVAWIPLTIFWFGIG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++  G     + N   G         ++A ++  + W+ ++ + +P   P
Sbjct: 134 LPGK----IFIIWLGGLVPCVINAYVGVKMTNPTLIQMARTYGASDWQIFKQLCIPSALP 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                   A    W   + +E+ +         GLG  I           VVLG+ ++  
Sbjct: 190 MVFGALQIALACCWTNLVAAELLA------ADAGLGFMITMGRRLAMPEMVVLGMFMVGL 243

Query: 565 ----FVLALNR 571
                 + ++R
Sbjct: 244 TGAFIGVVIDR 254



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 80/205 (39%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L Q+A  +         ++L                  +  PI +I++ IP + ++
Sbjct: 64  DGALLHQHAWVSIQEAFGGYFLALAVGLPLGLAMGWFNVAEGLARPIFEIIRPIPPVAWI 123

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             T+ +F    PGK        IF I+   +     + Y  +      L +++R++  S 
Sbjct: 124 PLTIFWFGIGLPGK--------IFIIWLGGLVPCVINAYVGVKMTNPTLIQMARTYGASD 175

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ F  L +P ++P +   + ++++  W  +VA+E++          G+G  I +  +  
Sbjct: 176 WQIFKQLCIPSALPMVFGALQIALACCWTNLVAAELLA------ADAGLGFMITMGRRLA 229

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               ++  M  +         ++ R
Sbjct: 230 MPEMVVLGMFMVGLTGAFIGVVIDR 254


>gi|206563240|ref|YP_002234003.1| putative sulfonates ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198039280|emb|CAR55245.1| putative sulfonates ABC transporter permease protein [Burkholderia
           cenocepacia J2315]
          Length = 365

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 88/289 (30%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++  + F   +  +  L      +         +L   +     L      + 
Sbjct: 71  RIVGFSDWAYTDTFGTAAWTIAALLLVAATLGHLVAATRTRLARVRPAGPWLVALPLVLA 130

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   +      T+  + +       +   VG
Sbjct: 131 AWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLKLLALGFAYGVTVGFAVG 190

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 191 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPSSYS----AAAFLIALATGFPVA 246

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 247 VLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 306

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 307 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 349



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A  T  
Sbjct: 114 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLK 173

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 174 LLALGFAYGVTVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 226

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  +  + +    +  + ++ +   +V+R+   +       + +P ++P
Sbjct: 227 -PSSYSAAAFLIALATGFPVAVLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALP 285

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 286 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 339

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 340 LFSGLIALLF 349


>gi|220924754|ref|YP_002500056.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949361|gb|ACL59753.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 251

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 101/262 (38%), Gaps = 19/262 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P     + P +  +  F L   +    L        P  + +     L        A  +
Sbjct: 3   PRRGAALLPLVGLVAFFALWEAVPRAGLVNPAFLPPPSVLPESFLRELRSGQWLAAAGSS 62

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
                + + + +       TL    R    +   ++ +++ +P L ++ F +++F     
Sbjct: 63  LGHYTAGLALGVGLGIAAGTLTGLFRTAESLSAWVVRVLRPVPGLAWVPFAIIWFGV--- 119

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPF 187
                +  AA+F I     W + F+ + ++  + RDL EV+ +F   S  ++   +  P 
Sbjct: 120 -----SPAAAVFIIAVGVFWIVYFASHGAIRGVDRDLVEVAEAFGFRSAPERLLTVVWPA 174

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + PG++  +  ++   W  VVA+E+  V        G+G  +  A        ++  MLT
Sbjct: 175 ATPGILVGVRTAIGQAWMAVVAAEIFGVA-------GLGQRMMQASTLLATDIVVVYMLT 227

Query: 248 MLGVIFLYD---QLLFRPMIVW 266
           M  +  ++D     L R M+ W
Sbjct: 228 MALLYGVFDAAFTALQRRMLRW 249



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 14/227 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPV 404
            W  V     +  A+     ++     +++    WL     ++      + +   + I  
Sbjct: 21  LWEAVPRAGLVNPAFLPPPSVLPESFLRELRSGQWLAAAGSSLGHYTAGLALGVGLGIAA 80

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G   G      S      ++L   P   + P  +                ++  G  W +
Sbjct: 81  GTLTGLFRTAESLSAWVVRVLRPVPGLAWVPFAIIWFGVSPA----AAVFIIAVGVFWIV 136

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            F           D  EVA +F           ++ P   P  + G  TA G AW A + 
Sbjct: 137 YFASHGAIRGVDRDLVEVAEAFGFRSAPERLLTVVWPAATPGILVGVRTAIGQAWMAVVA 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +E+           GLG  + +++   +   VV+ +L M       +
Sbjct: 197 AEIFG-------VAGLGQRMMQASTLLATDIVVVYMLTMALLYGVFD 236


>gi|309781347|ref|ZP_07676083.1| taurine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308919760|gb|EFP65421.1| taurine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 289

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A++  IP+G+ +G        + P  +     P   + PLVV  +    
Sbjct: 98  SALRVFGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVVIWLGI-- 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  +   +    A +   +  +  R++ILP   P 
Sbjct: 156 --DERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVVRHVILPAALPE 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T G+G  +  ++       VV+G++++   
Sbjct: 214 ILTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDLVVMGIVLIGAI 267

Query: 566 VLALN 570
             A +
Sbjct: 268 AWAFD 272



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 78/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   + LR+  A  ++ +           SR    +L P ++  + +P L +L   V
Sbjct: 91  LAAHLGWSALRVFGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            E A I  I+ +    +  +    + +   +    + +   S  Q  
Sbjct: 151 IWLGID--------ERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVILPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDL 256

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++  ++ +  + + +D  +
Sbjct: 257 VVMGIVLIGAIAWAFDLAM 275


>gi|282864753|ref|ZP_06273807.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282560178|gb|EFB65726.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 292

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 86/225 (38%), Gaps = 10/225 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + D         +L +    +  R L   ++++        L A+ + +   +
Sbjct: 66  KLPPPSAVWDSARDMWLKGTLLEVVWTSVSRGLLGFLLAVAIGTPLGLLVARVKVVRAAI 125

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++             L A+ ++           +   +  
Sbjct: 126 GPILSGLQSLPSVAWVAPAVIWLGLNDKMMYAVILLGAVPSVAN--------GLVSGVDQ 177

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +  W++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 178 VPPLFLRAGRTIGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLG 237

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                G  +       D+  I  A+L +L V    D L+F P+  
Sbjct: 238 LGL--GQLLENGRNNFDMPGIFLAILLILFVGIAIDLLIFSPLER 280



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 76/194 (39%), Gaps = 6/194 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R ++  ++A  I  P+G+ +     + + I P    L + P+  +    V  +    
Sbjct: 93  SVSRGLLGFLLAVAIGTPLGLLVARVKVVRAAIGPILSGLQSLPSVAWVAPAVIWLGL-- 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    +   +++G    P  F     +   TG R   +I+LP   P 
Sbjct: 151 --NDKMMYAVILLGAVPSVANGLVSGVDQVPPLFLRAGRTIGATGLRGTWHIVLPAALPG 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +         G    +         P + L +L++   
Sbjct: 209 YLAGLKQGWAFSWRSLMAAEIIASSPDLGLGLG--QLLENGRNNFDMPGIFLAILLILFV 266

Query: 566 VLALNRFLWHPLYL 579
            +A++  ++ PL  
Sbjct: 267 GIAIDLLIFSPLER 280


>gi|163843831|ref|YP_001628235.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|163674554|gb|ABY38665.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
          Length = 278

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|158316295|ref|YP_001508803.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158111700|gb|ABW13897.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 329

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + +   ++     T+   V    I +++ + VGI +G  P +    QPF   L A P  
Sbjct: 117 GWVEEGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLGEIFQPFIVALNAVPRL 176

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL +    +   +    +SL++ F     + ++   G         +V    + +  
Sbjct: 177 ALVPLFILWFGFGLGSKVALVSLIVFF----LVFYSTYEGVRDVEQRLIDVLKVMNASRL 232

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
                + +P    + + G   +   A  A++ +E+          TG+G  I  S     
Sbjct: 233 TVQLKVRIPSAGTWIIQGLRVSVPYALVAAVTAEIIG------ANTGIGYLIQRSAGNFY 286

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V  G+ ++      +N  +
Sbjct: 287 TAGVFAGIAVLVVVSTIINALV 308



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P +I   +   ++   L      T +  +    I  +   +   +   S  LG +  P +
Sbjct: 108 PSEIWSALTGWVEEGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLGEIFQPFI 167

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             + ++P L  +   +++F      KV    L   F +F         S Y+ + ++ + 
Sbjct: 168 VALNAVPRLALVPLFILWFGFGLGSKVALVSLIVFFLVFY--------STYEGVRDVEQR 219

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +V +    S       + +P +   ++  + +S+       V +E+I          G
Sbjct: 220 LIDVLKVMNASRLTVQLKVRIPSAGTWIIQGLRVSVPYALVAAVTAEIIGANT------G 273

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLFRPMIVWSNK 269
           IG  I  +        +   +  ++ V   I     LL + ++ W  +
Sbjct: 274 IGYLIQRSAGNFYTAGVFAGIAVLVVVSTIINALVTLLEKRLLRWKPR 321


>gi|229828160|ref|ZP_04454229.1| hypothetical protein GCWU000342_00217 [Shuttleworthia satelles DSM
           14600]
 gi|229792754|gb|EEP28868.1| hypothetical protein GCWU000342_00217 [Shuttleworthia satelles DSM
           14600]
          Length = 259

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 96/264 (36%), Gaps = 21/264 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----LPQYASR 67
           +R      +  L   L + +   L    +   +  +   +  + L+       L ++   
Sbjct: 7   TRWNLIPKWVWLLISLGVALALWLFASSRWPIIFANPEQVWQVFLEKGVHSTILWEHVWA 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L+   I+ L     A L A       ++ P +  +++IP L ++           
Sbjct: 67  SLSRVLTGFGIAFLLAIPIAFLMAWYEPFQKIVEPWIQFVRNIPPLAYVFLITAALGVGN 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            GKV    +A+      +        +YQ + ++   L + +R         F+ + +P 
Sbjct: 127 MGKVTVIVIASFLVQVVT--------VYQGVKSVDVTLIKAARVLGARQSDIFFKVTIPA 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++    + +S     ++ASE++          G+G  I  A     +  +L  ++ 
Sbjct: 179 ATPYILVAARLGLSTSLTTLMASEIVGG------DRGLGMMIQKASGYYQMDIVLLGIIV 232

Query: 248 MLGVIFLYDQL---LFRPMIVWSN 268
           +  +   ++++   L R    W  
Sbjct: 233 LGVIGIAFEKIVRGLERRFTGWQE 256



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 70/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    IA ++ IP+   + +       ++P+ Q +   P   +  L+ + +   
Sbjct: 66  ASLSRVLTGFGIAFLLAIPIAFLMAWYEPFQKIVEPWIQFVRNIPPLAYVFLITAALGVG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               N+    +++  +    +  V  G  +      + A          +  + +P   P
Sbjct: 126 ----NMGKVTVIVIASFLVQVVTVYQGVKSVDVTLIKAARVLGARQSDIFFKVTIPAATP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y +  A      +    + SE+           GLG  I +++       V+LG++++  
Sbjct: 182 YILVAARLGLSTSLTTLMASEIVGGD------RGLGMMIQKASGYYQMDIVLLGIIVLGV 235

Query: 565 FVLALNRFL 573
             +A  + +
Sbjct: 236 IGIAFEKIV 244


>gi|62290461|ref|YP_222254.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700384|ref|YP_414958.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189024691|ref|YP_001935459.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237815970|ref|ZP_04594967.1| choline ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254697906|ref|ZP_05159734.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730796|ref|ZP_05189374.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|260546994|ref|ZP_05822733.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260758515|ref|ZP_05870863.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260762339|ref|ZP_05874682.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196593|gb|AAX74893.1| hypothetical glycine betaine/L-proline ABC transporter, permease
           protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616485|emb|CAJ11550.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|189020263|gb|ACD72985.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237789268|gb|EEP63479.1| choline ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|260096044|gb|EEW79921.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260668833|gb|EEX55773.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260672771|gb|EEX59592.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
          Length = 278

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I              S+ + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLSISSTPASLIEAGEAFGTSRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                  +     S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 PIRLTQLS----ISSTPASLIEAGEAFGTSRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|148254043|ref|YP_001238628.1| ABC transporter membrane subunit [Bradyrhizobium sp. BTAi1]
 gi|146406216|gb|ABQ34722.1| ABC transporter, membrane subunit [Bradyrhizobium sp. BTAi1]
          Length = 252

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 71/208 (34%), Gaps = 10/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            ++          ++    +++ R     ++ + + + +G+        S  + P   LL
Sbjct: 42  VLLAAIDMFRSGVLLKDLLVSLRRAAAGFVVGASLGVTLGLLTSRVRLFSIGLSPLFNLL 101

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA    P+ V        +    ++  +       +  N   G    P+ +   A S
Sbjct: 102 RPIPAIALVPIAVVWFGIGEESKYFVIAYTVFLA----VWLNTHHGMEHVPDTYIRAARS 157

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +    +  +++P   P+   G       A+ + + +E+         ++G+G  + E
Sbjct: 158 LGASRSLEFLQVVVPASAPHIFAGLRFGAALAFLSLVAAEL------TGASSGIGYRLDE 211

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +      + +G++ +      L+   
Sbjct: 212 ARQYILVDRMFVGLIELGVLGATLDTLF 239



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 91/249 (36%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGI-INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+A V V  +  +I +        P  ++           L +    +  R  +  V+  
Sbjct: 15  LVAIVAVWQLASSIAIVNPVLFPSPAKVLLAAIDMFRSGVLLKDLLVSLRRAAAGFVVGA 74

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L ++ R   + L P+ ++++ IP +  +   VV+F           E +  F
Sbjct: 75  SLGVTLGLLTSRVRLFSIGLSPLFNLLRPIPAIALVPIAVVWFGIG--------EESKYF 126

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +    +  + +  + ++P      +RS   S   +F  + VP S P +   +    
Sbjct: 127 VIAYTVFLAVWLNTHHGMEHVPDTYIRAARSLGASRSLEFLQVVVPASAPHIFAGLRFGA 186

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
           +  +  +VA+E+           GIG  +  A +   +  +   ++ +  +    D L  
Sbjct: 187 ALAFLSLVAAEL------TGASSGIGYRLDEARQYILVDRMFVGLIELGVLGATLDTLFV 240

Query: 259 -LFRPMIVW 266
            L R +I W
Sbjct: 241 WLGRRLIHW 249


>gi|238024532|ref|YP_002908764.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
 gi|237879197|gb|ACR31529.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
          Length = 291

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 82/214 (38%), Gaps = 10/214 (4%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
             +      +    L      +   +L    I  +  F   ++A  +R    +L  +  +
Sbjct: 75  ATLRAFAGGIASGELLVKTGISLSVLLRGYAIGAVLAFALTSVAVSTRVGRDLLAMLTAM 134

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
              +P +  L   +++F             + +F +  S +W +  +MY     +P  L 
Sbjct: 135 FNPLPSIALLPIALLWFGLGTG--------SLLFVLVHSVLWPLALNMYTGFLGVPATLR 186

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
              R++ L G +  W + VP ++P ++  + +  +  W  ++A+E++          G+G
Sbjct: 187 MAGRNYGLRGLRLVWLILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLG 244

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            YI     E     +   +  ++ +  L + L+F
Sbjct: 245 WYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 278



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 6/208 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++  ++    I +++   +             +     +    P+    P+
Sbjct: 87  GELLVKTGISLSVLLRGYAIGAVLAFALTSVAVSTRVGRDLLAMLTAMFNPLPSIALLPI 146

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N+  G    P   +    ++ + G R    
Sbjct: 147 ALLWFGLGTGS----LLFVLVHSVLWPLALNMYTGFLGVPATLRMAGRNYGLRGLRLVWL 202

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  ++G       AW   I +E+           GLG YI ++  +     V 
Sbjct: 203 ILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELYTDRVF 260

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+  +    L +   ++  L     R 
Sbjct: 261 AGLAAVIVIGLLVEHLVFDTLERLTVRR 288


>gi|119386815|ref|YP_917870.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377410|gb|ABL72174.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 283

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I   F       ++     +  R    + +  +  + + +  G      + I    Q+  
Sbjct: 71  IATGFEMFADGTLLPHLAASAGRAYAGLFLGVLAGVVLALASGLTMTGEALIDGLVQIKR 130

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PLV+  +             ++       +  N  A          E+A + 
Sbjct: 131 AIPTLALIPLVILWLGIGEA----MKIFIIFTAVLVPVYVNTHAALRGIDIGHVELARTL 186

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T   + R + LPG  P +      A    W + +V E+ +        TG+G  +  +
Sbjct: 187 GLTRSEFIRNVALPGALPGFFVSLRLAVTLCWTSLVVLELIN------TQTGIGYLMNRA 240

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
            + G    +V+G+LI     L  +
Sbjct: 241 RDWGQTDIIVVGILIYAVLGLLSD 264



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 89/235 (37%), Gaps = 14/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  VL      +          P   +          +L  + + +  R  + + + +L
Sbjct: 44  VLLVVLWEAAARLGYLSPHTLAAPSTAIATGFEMFADGTLLPHLAASAGRAYAGLFLGVL 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A  +  +     ++  ++ I ++IP L  +   +++            E   IF 
Sbjct: 104 AGVVLALASGLTMTGEALIDGLVQIKRAIPTLALIPLVILWLGIG--------EAMKIFI 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IFT+ +  +  + + +L  I     E++R+  L+  +    + +P ++PG   ++ ++++
Sbjct: 156 IFTAVLVPVYVNTHAALRGIDIGHVELARTLGLTRSEFIRNVALPGALPGFFVSLRLAVT 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W  +V  E+I          GIG  +  A        I+  +L    +  L D
Sbjct: 216 LCWTSLVVLELI------NTQTGIGYLMNRARDWGQTDIIVVGILIYAVLGLLSD 264


>gi|307244072|ref|ZP_07526191.1| ABC transporter, substrate-binding protein, QAT family
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492596|gb|EFM64630.1| ABC transporter, substrate-binding protein, QAT family
           [Peptostreptococcus stomatis DSM 17678]
          Length = 553

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 84/211 (39%), Gaps = 20/211 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ + +L       L  K++ L  V++ I  + Q+IP L  L   +  F         
Sbjct: 24  LIALSLGVLVAVPVGVLITKNKTLTKVVMTIASVFQTIPSLSLLAIMIPIFGVG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L AI AIF   +  +  +    +  +  ++ + ++   ++  Q    + +  + P +
Sbjct: 78  --KLPAIIAIFIYSLLPVLRNTVLGMNGVDENILDAAKGMGMTFSQIICRIQIRLAAPVI 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S      +V+A   +    + +   G+G +I   +   ++  I+   L +  + 
Sbjct: 136 MAGIRLSA----VYVIAWTTLA---SYVGAGGLGDFIFSGLTLFNVPMIVMGALPVTVIA 188

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
            + D +L R       KF   +T   Y   S
Sbjct: 189 LVIDFILARL-----EKFVQPKTKSQYKGKS 214



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 72/213 (33%), Gaps = 16/213 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +       ++  ++ + +  ++ +PVG+ I     ++  +   A +    P+     
Sbjct: 9   WPELFLKIGEHLYISLIALSLGVLVAVPVGVLITKNKTLTKVVMTIASVFQTIPSLSLLA 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++           L   + +   +   +L N + G +    +  + A    +T  +   
Sbjct: 69  IMIPIFGVG----KLPAIIAIFIYSLLPVLRNTVLGMNGVDENILDAAKGMGMTFSQIIC 124

Query: 496 YIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            I +    P  + G   +     AW              ++   GLG +I       + P
Sbjct: 125 RIQIRLAAPVIMAGIRLSAVYVIAWTTL---------ASYVGAGGLGDFIFSGLTLFNVP 175

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +V+G L +    L ++ F+   L  +     +
Sbjct: 176 MIVMGALPVTVIALVID-FILARLEKFVQPKTK 207


>gi|187918023|ref|YP_001883586.1| transporter [Borrelia hermsii DAH]
 gi|119860871|gb|AAX16666.1| transporter [Borrelia hermsii DAH]
          Length = 299

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L + +  T   +  ++  S+++  +   L     +  + L P+LD+MQ++P   +L   
Sbjct: 83  NLWEVSMDTISIIFVSVFFSVIWGILIGILGGYYLKFYVFLKPLLDLMQAMPPFIYLIPA 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F             +AIFA     +  +       +  +P ++ E ++SF  S  + 
Sbjct: 143 IPFFGMG--------TSSAIFATIIFAMPPVIRYTRLGIIQVPGEVIEAAKSFGSSNIRI 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++  ++  +  S+      +V + M+          G+G  +  +++     
Sbjct: 195 LFQIQLPLALQSIIEGINQSIMMAISMIVIAAMVGSS-------GLGRTVIYSVERLHFG 247

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             L + L ++ +  + D+++    I +S
Sbjct: 248 EGLISGLAVVVIAIILDRIMQAIFIKFS 275



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 84/229 (36%), Gaps = 12/229 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404
           + +  ++C ++     + +  ++       + + +W   + T+  + V +  + I  I +
Sbjct: 50  VLFIIIICVLSFLFLKKRLALLIMLGFCFILYFNLWEVSMDTISIIFVSVFFSVIWGILI 109

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI  G+       ++P   L+ A P  ++    +        +      +         +
Sbjct: 110 GILGGYYLKFYVFLKPLLDLMQAMPPFIYLIPAIPFFGMGTSSAIFATIIF----AMPPV 165

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G    P +  E A SF  +  R    I LP      + G   +   A +  +++
Sbjct: 166 IRYTRLGIIQVPGEVIEAAKSFGSSNIRILFQIQLPLALQSIIEGINQSIMMAISMIVIA 225

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +         ++GLG  +  S E+  F E ++  L +    + L+R +
Sbjct: 226 AMVG-------SSGLGRTVIYSVERLHFGEGLISGLAVVVIAIILDRIM 267


>gi|88799547|ref|ZP_01115123.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
 gi|88777632|gb|EAR08831.1| ABC-type proline/glycine betaine transport system, permease
           component [Reinekea sp. MED297]
          Length = 275

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   ++ A  + +L        AA    L  +L PILD+MQ+IP   +L   + 
Sbjct: 90  WEETIETFSLIVYATGLCVLLGVPLGIAAAHRPWLFRLLRPILDLMQTIPPFVYLIPALT 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  +  +P +L E  R+F  +      
Sbjct: 150 LFGL---GVVPGLVSTIVFAIAAP-----IRLTYLGISEVPEELLEAGRAFGCTKRSLLL 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +M  +   +   +      VV + ++          G+G  +  A+   D+   
Sbjct: 202 KVEIPAAMSSIRAGITQCIMLSLSMVVIAALV-------GADGLGKPVVRALNTVDIATG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ V  + D++ 
Sbjct: 255 FEAGLAIVLVAIMLDRIF 272



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 75/230 (32%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIP 403
           +  +  VA  + W+     V  F    +L +  LG       T   +V    +  ++ +P
Sbjct: 54  WLFIGIVAALVFWRQRNKGVTAFFVLSLLLIWNLGYWEETIETFSLIVYATGLCVLLGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP +   ++P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 114 LGIAAAHRPWLFRLLRPILDLMQTIPPFVYL---IPALTLFGLGVVPGLVSTIVFAIAAP 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S  P +  E   +F  T       + +P        G       + +  ++
Sbjct: 171 IRL-TYLGISEVPEELLEAGRAFGCTKRSLLLKVEIPAAMSSIRAGITQCIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +           GLG  +  +             L +    + L+R  
Sbjct: 230 AALVG-------ADGLGKPVVRALNTVDIATGFEAGLAIVLVAIMLDRIF 272


>gi|283470017|emb|CAQ49228.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 504

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|269928622|ref|YP_003320943.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
 gi|269787979|gb|ACZ40121.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
          Length = 277

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 10/184 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ R+ +  +I  +  + +G+ +G    +   + P        P +  FPL++      
Sbjct: 83  ITLGRLALGTLIGGLPAVLLGLAMGLSRWLRLALDPIIAATYPLPKSALFPLLLLIFGLG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       ++  G  +  + N + G  A    + +VA +F        R + LPG  P
Sbjct: 143 EGSK----VAMVAIGVFYLAVTNSMEGVLAINPVYLDVAKTFGARRLDVVRTVALPGALP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G     G      +++E+           GLG  +  + +  S   +   + +   
Sbjct: 199 LVLAGLRLGVGTGLILGVLAEMLGARD------GLGYLLWSAWQTFSVSSLYAVLFVTAV 252

Query: 565 FVLA 568
               
Sbjct: 253 LGFV 256



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  + +  I     +   +    P  I+      +    L  +   T  R+    +I  L
Sbjct: 38  LVLLAIWEITARAGYVDQRFYPAPSSIIQAFWEAVTTGVLLHHLKITLGRLALGTLIGGL 97

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR L + L PI+     +P        ++ F      KV    +   + 
Sbjct: 98  PAVLLGLAMGLSRWLRLALDPIIAATYPLPKSALFPLLLLIFGLGEGSKVAMVAIGVFYL 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             T+ +        + +  I     +V+++F          + +P ++P ++  + + + 
Sbjct: 158 AVTNSM--------EGVLAINPVYLDVAKTFGARRLDVVRTVALPGALPLVLAGLRLGVG 209

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQL 258
            G    V +EM+   D      G+G  +  A +      L A+L+    +  V      +
Sbjct: 210 TGLILGVLAEMLGARD------GLGYLLWSAWQTFSVSSLYAVLFVTAVLGFVSVKVVDI 263

Query: 259 LFRPMIVWS 267
           L R ++ W 
Sbjct: 264 LRRWLVPWQ 272


>gi|222086662|ref|YP_002545196.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221724110|gb|ACM27266.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 285

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  + T   +L++  + +L        AA+   L  ++ PILD+MQ+IP   +L   ++
Sbjct: 94  WKETTETLALVLASTFVCMLVGVPLGIAAARRPWLYAIMRPILDLMQTIPTFVYLVPAMI 153

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                  G V G     +FAI  S            + + P  L E + +F  +  Q   
Sbjct: 154 LLGL---GMVPGLIATVVFAIPAS-----IRMTRLGIISTPPSLVEAAEAFGATPRQVLR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VPF+MP ++  +  ++      V  + ++         PG+G  +  A+   ++   
Sbjct: 206 KVEVPFAMPQIMAGLTQTIMLSLSMVSIAALV-------GAPGLGVPVLRALNSVNVAKS 258

Query: 242 LYAMLTMLGVIFLYDQLLFRP 262
             +   ++ +  + D++   P
Sbjct: 259 FDSGSCIVILAIILDRMFRAP 279



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 11/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  ++ +P+GI    RP + + ++P   L+   P  V+    +  +    
Sbjct: 100 TLALVLASTFVCMLVGVPLGIAAARRPWLYAIMRPILDLMQTIPTFVYLVPAMILLGLGM 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I  +    +     G  + P    E A +F  T  +  R + +P   P 
Sbjct: 160 VPGLIATVVFAIPAS----IRMTRLGIISTPPSLVEAAEAFGATPRQVLRKVEVPFAMPQ 215

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +   ++ +           GLG  +  +    +  +       +   
Sbjct: 216 IMAGLTQTIMLSLSMVSIAALVG-------APGLGVPVLRALNSVNVAKSFDSGSCIVIL 268

Query: 566 VLALNRFLWHP 576
            + L+R    P
Sbjct: 269 AIILDRMFRAP 279


>gi|254255270|ref|ZP_04948586.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124901007|gb|EAY71757.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 324

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIQIIFWGFTISSAIGVPIGIVCGTFSALARLQEPFFEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +          ++++PGI P 
Sbjct: 191 APK----IAIIVIGTFFQQVLIVANTTRKLEYGLFEAALTLGTKKPGLIAHVVIPGILPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++ +    F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQSRYQHFDNVYAAILMIGII 300

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 301 GLGTDIVLALLGRRLFPW 318



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +     IS         +      L  +  P  +
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIQIIFWGFTISSAIGVPIGIVCGTFSALARLQEPFFE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I     +     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTFFQQVLIVANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +          ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAALTLGTKKPGLIAHVVIPGILPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 275 TWYISQQSRYQHFDNVYAAILMIGIIGLGTDIVLALLGRRLFPW 318


>gi|84683760|ref|ZP_01011663.1| putative ABC transporter membrane protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668503|gb|EAQ14970.1| putative ABC transporter membrane protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 258

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 90/228 (39%), Gaps = 14/228 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N   ++  +L++ +  +          PR     + I  D  +L      T  R      
Sbjct: 10  NWPGIIFILLILVVWEVWAMIADSFYFPRASAVALTIVEDWGNLWAATLDTLRRAAIGFA 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+L+       +  + R LG ++ P+L+  + +P +  +   ++             + A
Sbjct: 70  IALVTMLPLGIVLGRVRVLGEIVEPVLEFFRPLPPIAVVPLAIMLLGIG--------DAA 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  +     + +  +   ++         ++RS RL+ W++   + +P ++P +   + 
Sbjct: 122 KLVVVVWGASFPIVINTIDAVKVQDPMQARLARSLRLTTWERMTMIDLPAALPRIFAGIK 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           + ++      V SE+IV  +      G+G Y+ +A  +  +  ++ A+
Sbjct: 182 LGITVALLLTVVSEIIVSTN------GLGDYLRIAQSDFSMTRVMTAL 223



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 21/227 (9%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----------DVLYVIWLGCITMFRVVV 392
             I W  ++  + I + W+    I + F +            D   +      T+ R  +
Sbjct: 7   GRINWPGIIFILLILVVWEVWAMIADSFYFPRASAVALTIVEDWGNLWAATLDTLRRAAI 66

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              IA +  +P+GI +G    +   ++P  +     P     PL +  +           
Sbjct: 67  GFAIALVTMLPLGIVLGRVRVLGEIVEPVLEFFRPLPPIAVVPLAIMLLGIGDA----AK 122

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++++G  + I+ N I            +A S  +T W     I LP   P    G   
Sbjct: 123 LVVVVWGASFPIVINTIDAVKVQDPMQARLARSLRLTTWERMTMIDLPAALPRIFAGIKL 182

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
               A   ++VSE+       + T GLG Y+  +    S   V+  +
Sbjct: 183 GITVALLLTVVSEII------VSTNGLGDYLRIAQSDFSMTRVMTAL 223


>gi|325525062|gb|EGD02963.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 324

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     I+S I +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 131 SIRIIFWGFAISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD 190

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +      +   ++++PG+ P 
Sbjct: 191 APK----IAIIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPD 246

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 247 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 300

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 301 GLGTDIVLGLLGRKLFPW 318



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L +    +   +     IS         +      L  +  P L+
Sbjct: 109 YTAFTTPPASRDGVWLHESLWHSIRIIFWGFAISSAIGVPLGIVCGTFSALARLQEPFLE 168

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 169 FFRYLPAPAFGALMVAILGIYDAPK--------IAIIVIGTLFQQVLIIANTTRKLEYGL 220

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 221 FEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 274

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 275 TWYISQQARYQHFDNVYAAILMIGIIGLGTDIVLGLLGRKLFPW 318


>gi|254689762|ref|ZP_05153016.1| choline ABC transporter, permease protein [Brucella abortus bv. 6
           str. 870]
 gi|256258014|ref|ZP_05463550.1| choline ABC transporter, permease protein [Brucella abortus bv. 9
           str. C68]
 gi|260755294|ref|ZP_05867642.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260884309|ref|ZP_05895923.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 9 str. C68]
 gi|297248846|ref|ZP_06932564.1| choline ABC transporter, permease [Brucella abortus bv. 5 str.
           B3196]
 gi|260675402|gb|EEX62223.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260873837|gb|EEX80906.1| glycine betaine/L-proline ABC transporter permease [Brucella
           abortus bv. 9 str. C68]
 gi|297176015|gb|EFH35362.1| choline ABC transporter, permease [Brucella abortus bv. 5 str.
           B3196]
          Length = 278

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++        AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V+G     IF I              S+ + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVLGLLATVIFVIPAP-----IRLTQLSISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVLGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                  +     S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 PIRLTQLS----ISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|330971331|gb|EGH71397.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 267

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 91/252 (36%), Gaps = 11/252 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIW 381
            +   P   +   S    + ++ ++      GV   +   + G +++  T       +  
Sbjct: 14  PKGSIPVPIVWSASALAWTLLIGLWAVLSYGGVVPAMFLPTPGAVLDAATRLARDGTLGT 73

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++  V++  II+SI+ +PVG+ +G    + + ++P    +   P   F PL +  +
Sbjct: 74  HVWASVEVVMLGFIISSIVAVPVGLMMGSFRVVQAFLEPLVNFIRYLPVTSFVPLFILWI 133

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                        ++IFG  +  L  +   +     D    + +          ++I P 
Sbjct: 134 GIGLEQ----RISIIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRADAVLHVIAPA 189

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +       G AW   +V+E+ +       ++GLG    ++        + L + +
Sbjct: 190 SLPGVLDTLRVTMGWAWTYLVVAELVA------ASSGLGYLSLKAMRGFQVDVIFLAIAV 243

Query: 562 MCCFVLALNRFL 573
           +    L  ++  
Sbjct: 244 IGLLGLITDQLF 255



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 93/241 (38%), Gaps = 18/241 (7%)

Query: 23  LAFVLVIGIINILLHG----IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           LA+ L+IG+  +L +G          P  ++D         +L  +   +   ++   +I
Sbjct: 29  LAWTLLIGLWAVLSYGGVVPAMFLPTPGAVLDAATRLARDGTLGTHVWASVEVVMLGFII 88

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S +       +    R +   L P+++ ++ +P+  F+   +++       +        
Sbjct: 89  SSIVAVPVGLMMGSFRVVQAFLEPLVNFIRYLPVTSFVPLFILWIGIGLEQR-------- 140

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I     +     +      I +DL   S +   +      ++  P S+PG++  + +
Sbjct: 141 ISIIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRADAVLHVIAPASLPGVLDTLRV 200

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +M   W ++V +E++          G+G     A++   +  I  A+  +  +  + DQL
Sbjct: 201 TMGWAWTYLVVAELVAASS------GLGYLSLKAMRGFQVDVIFLAIAVIGLLGLITDQL 254

Query: 259 L 259
            
Sbjct: 255 F 255


>gi|182440129|ref|YP_001827848.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178468645|dbj|BAG23165.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 275

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 12/257 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-- 376
           +   +R        +         +L   W  +     +     +    +       V  
Sbjct: 12  SPASVRRSRLRAAPRWVRRAVGPTLLLALWQVLSATGVLHADVLASPGTIARAGADLVAD 71

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ RVVV +++  ++   + +  G        +    Q+L   P     PL
Sbjct: 72  GTLPAAMGVSLQRVVVGLLLGGVVGTALALVSGLSRLGEDLVDATVQMLRTVPWVGLIPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             L+  G  +++  NV AG         E   S  +  W   R+
Sbjct: 132 FIIWLGIGEA----PKVALIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRH 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P  +TG   +   AW A +  E  +         G+G  + ++ E      +V
Sbjct: 188 VVLPGALPGAMTGLRYSLATAWLALVFGESIN------ADAGIGFLMNQAREFFRTDVIV 241

Query: 557 LGVLIMCCFVLALNRFL 573
           + +++     L  +  +
Sbjct: 242 VCLVVYAFLGLTADVIV 258



 Score = 95.0 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 90/232 (38%), Gaps = 17/232 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I       +   +LP     +  R++  +++  +     A ++  SR    ++ 
Sbjct: 55  LASPGTIARAGADLVADGTLPAAMGVSLQRVVVGLLLGGVVGTALALVSGLSRLGEDLVD 114

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++++P +G +   +++            E   +  I     +++  ++Y  +  +
Sbjct: 115 ATVQMLRTVPWVGLIPLFIIWLGIG--------EAPKVALIALGVAFHLYLNVYAGIRGV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E   S  L  W    ++ +P ++PG +  +  S++  W  +V       G+++  
Sbjct: 167 DAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSLATAWLALV------FGESINA 220

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270
             GIG  +  A +      I+  ++    +    D   ++L R ++ W   F
Sbjct: 221 DAGIGFLMNQAREFFRTDVIVVCLVVYAFLGLTADVIVRILERLLLQWRPTF 272


>gi|186470869|ref|YP_001862187.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197178|gb|ACC75141.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 296

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   + +R+  A  ++ +       L   SR    +L P ++  + +P L +L   V
Sbjct: 98  LSEHLMWSAIRVFGAFALACVTAVPIGVLMGVSRVARGLLDPPIEFYRPLPPLAYLPLVV 157

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E A +  I+ +    +  +    + +   +    + S   +  Q  
Sbjct: 158 IWFGID--------ETAKLVVIWLACFAPIAMAARAGVRSAAVEQINAAWSLGANFRQVV 209

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P + P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 210 LHVVLPAASPEILTGLRIAIGFGWTTLVAAEMVA------ATAGLGQMVLNASSFLRTDV 263

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           ++  ++ +  + +L+D   ++L R ++ W  K
Sbjct: 264 VVMGIVLIGAIAWLFDLGMRVLERKLVPWKGK 295



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 27/205 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A +  +P+G+ +G        + P  +     P   + PLVV       
Sbjct: 105 SAIRVFGAFALACVTAVPIGVLMGVSRVARGLLDPPIEFYRPLPPLAYLPLVVIWFGI-- 162

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  +   +    A S      +   +++LP   P 
Sbjct: 163 --DETAKLVVIWLACFAPIAMAARAGVRSAAVEQINAAWSLGANFRQVVLHVVLPAASPE 220

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLR-------TTGLGAYIAESTEKGSFPEVVLG 558
            +TG   A G  W               L        T GLG  +  ++       VV+G
Sbjct: 221 ILTGLRIAIGFGW-------------TTLVAAEMVAATAGLGQMVLNASSFLRTDVVVMG 267

Query: 559 VLIMCCFVLALN---RFLWHPLYLY 580
           ++++       +   R L   L  +
Sbjct: 268 IVLIGAIAWLFDLGMRVLERKLVPW 292


>gi|56552158|ref|YP_162997.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543732|gb|AAV89886.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 277

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 10/161 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +  G        +    Q++   P     PL++        +      +L+  G  + I 
Sbjct: 99  VLNGQFKIAEEILNTPIQMIRNVPHLALLPLILIWFGLGETSK----IILIALGCFFPIY 154

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G         E+   + +T    ++ II PG  P  + G   + G  W   IV+E
Sbjct: 155 LNSFYGIRHIDKKLLEMGKVYGLTHRETFQNIIFPGATPSIMVGIRQSLGRMWITLIVAE 214

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             +        +G+G     + E      +VL ++I     
Sbjct: 215 TVA------AKSGIGYMATNAREFMQIDIIVLTLIIYAVLG 249



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 97/264 (36%), Gaps = 25/264 (9%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--------LDVHSLPQYASRTTL 70
           ++    F  +I II +L           + +   P +             L      ++L
Sbjct: 22  LWHRFLFPCLIPIIALLAWFFLTQGQNSESIFPTPQSVWHVTVRLTKNGVLWNNLWVSSL 81

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R ++  +I     F+   L  + +    +L   + +++++P L  L   +++F       
Sbjct: 82  RAIAGFIIGGGIGFLLGVLNGQFKIAEEILNTPIQMIRNVPHLALLPLILIWFGLG---- 137

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + I  I     + +  + +  + +I + L E+ + + L+  + F  +  P + P
Sbjct: 138 ----ETSKIILIALGCFFPIYLNSFYGIRHIDKKLLEMGKVYGLTHRETFQNIIFPGATP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S+   W  ++ +E +          GIG     A +   +  I+  ++    
Sbjct: 194 SIMVGIRQSLGRMWITLIVAETVAAKS------GIGYMATNAREFMQIDIIVLTLIIYAV 247

Query: 251 VIFLYDQL---LFRPMIVWSNKFR 271
           +    D     + + ++ W   +R
Sbjct: 248 LGSFSDFAAAKIEKHLLRWHQNYR 271


>gi|158315662|ref|YP_001508170.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158111067|gb|ABW13264.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 308

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 76/262 (29%), Gaps = 17/262 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L    G++R                   L       +        W S   +V+     +
Sbjct: 37  LPPAPGLVRPRASRRHTHGRGASLALRALLPLILFGLWWWGTEAGWISSDVLVSPPRMVE 96

Query: 376 VL-------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +     +++   +   +  +   +  G+  G        +    Q+L   
Sbjct: 97  TFGDLVREDELFHQVSVSLDLALRGALFGAAAGLLFGVVAGLWRIGEELLDAVLQMLRTI 156

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL +  +    L       LL+   T + +  N   G         E    F +
Sbjct: 157 PFLAVVPLFIVWLGIGDL----PKVLLISLATLFPMYLNTYNGVRNVDRRVIEAMEVFGL 212

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
            G R    +I+P   P  +TG     G +  A I +E  +       + GLG  + ++  
Sbjct: 213 RGARLVLTVIIPLALPSILTGLRYCLGISVLALIAAEQIN------SSAGLGYLMYQAQS 266

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
                 +V+ + I     L  +
Sbjct: 267 MQQVDVLVVVLAIYAVLGLLSD 288



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 17/203 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +    L   +       ++  +A   R    +L  +L ++++IP L  +   +V+     
Sbjct: 114 SLDLALRGALFGAAAGLLFGVVAGLWRIGEELLDAVLQMLRTIPFLAVVPLFIVWLGIG- 172

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  +L  +  I  + ++ M  + Y  + N+ R + E    F L G +    + +P 
Sbjct: 173 -------DLPKVLLISLATLFPMYLNTYNGVRNVDRRVIEAMEVFGLRGARLVLTVIIPL 225

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +   +      ++A+E I          G+G  +  A   Q +  ++  +  
Sbjct: 226 ALPSILTGLRYCLGISVLALIAAEQINSSA------GLGYLMYQAQSMQQVDVLVVVLAI 279

Query: 248 MLGVIFLYD---QLLFRPMIVWS 267
              +  L D   ++L R ++ W 
Sbjct: 280 YAVLGLLSDLVVRVLERLLMPWH 302


>gi|125974080|ref|YP_001037990.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256004444|ref|ZP_05429424.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281418225|ref|ZP_06249245.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125714305|gb|ABN52797.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255991585|gb|EEU01687.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281409627|gb|EFB39885.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316941325|gb|ADU75359.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 355

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++     ++   +    +  +  +  GI IG+ P +   + P  ++    PA  + P  
Sbjct: 153 FILQNTLYSIKLFLAGFTLGVVFGVGTGILIGWFPKVYYWVYPILKITGVIPAVAWMPFA 212

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++       +P      L++    + I      G  + P    EVA +          ++
Sbjct: 213 LTLFP----SPFSAAVFLIVICAWFSIAALTAQGIQSTPKYQFEVARTLGAKTPFLIFHV 268

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P   TG   A G A+   +++E+        +  GLG YI  S    ++ +V  
Sbjct: 269 AVPQAMPQIFTGISNANGFAFTTLVMAEMMG------QPGGLGYYINLSKVWSAYYKVFA 322

Query: 558 GVLIMCCFVLALNRFL 573
            +L+M      + + L
Sbjct: 323 SILVMALLFSLIMKIL 338



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 92/246 (37%), Gaps = 14/246 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P  F +   +    I+   L  + +   P     +    ++   + Q    +    L
Sbjct: 107 RQAPFRFAMGLAITAWDILGTKLLLLPQPFFPGPAKILESFLIEGDFILQNTLYSIKLFL 166

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   + ++F      L     ++   + PIL I   IP + ++ F +  F          
Sbjct: 167 AGFTLGVVFGVGTGILIGWFPKVYYWVYPILKITGVIPAVAWMPFALTLF--------PS 218

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AA+F I     +++     Q + + P+   EV+R+         +++ VP +MP + 
Sbjct: 219 PFSAAVFLIVICAWFSIAALTAQGIQSTPKYQFEVARTLGAKTPFLIFHVAVPQAMPQIF 278

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  +    +  +V +EM+          G+G YI L+        +  ++L M  +  
Sbjct: 279 TGISNANGFAFTTLVMAEMMG------QPGGLGYYINLSKVWSAYYKVFASILVMALLFS 332

Query: 254 LYDQLL 259
           L  ++L
Sbjct: 333 LIMKIL 338


>gi|254392988|ref|ZP_05008152.1| transport system integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294815722|ref|ZP_06774365.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326444068|ref|ZP_08218802.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706639|gb|EDY52451.1| transport system integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328321|gb|EFG09964.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 302

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 95/254 (37%), Gaps = 11/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ P +  +   ++V   +       +     P  + D V       SL +    +  R
Sbjct: 47  QKVLPPLTAVALVLVVWQFLVWAEVADEGSLPAPGAVWDSVQNLWLQGSLFEIVWTSVSR 106

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   +++L        L A+   +   L PIL  +QS+P + ++   V++         
Sbjct: 107 GLLGFLLALAIGTPLGLLVARVTFVRSALGPILSGLQSLPSVAWVPPAVIWLGLNNQMMY 166

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I    V ++   +   +  +P       R+   +G +  W++ +P ++PG
Sbjct: 167 A--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVMPAALPG 218

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V  +    +  W  ++A+E+I     +      G  +       D+  +  A+L +L V
Sbjct: 219 YVAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNSDMPGVFLAILLILVV 276

Query: 252 IFLYDQLLFRPMIV 265
               D L+F P+  
Sbjct: 277 GIAIDLLIFSPLER 290



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 93/259 (35%), Gaps = 13/259 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC--- 384
                Q+   + +  +  +    VV    +       G +       D +  +WL     
Sbjct: 38  RAPLRQVLVQKVLPPLTAVALVLVVWQFLVWAEVADEGSLPAPGAVWDSVQNLWLQGSLF 97

Query: 385 ----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R ++  ++A  I  P+G+ +     + S + P    L + P+  + P  V  
Sbjct: 98  EIVWTSVSRGLLGFLLALAIGTPLGLLVARVTFVRSALGPILSGLQSLPSVAWVPPAVIW 157

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +       N  +  +++ G    I   +++G    P  F     +   TG R   +I++P
Sbjct: 158 LGL----NNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLRGTWHIVMP 213

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P YV G       +W + + +E+ +           G  +         P V L +L
Sbjct: 214 AALPGYVAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNSDMPGVFLAIL 271

Query: 561 IMCCFVLALNRFLWHPLYL 579
           ++    +A++  ++ PL  
Sbjct: 272 LILVVGIAIDLLIFSPLER 290


>gi|241762678|ref|ZP_04760747.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|260752322|ref|YP_003225215.1| binding-protein-dependent transporters inner membrane component
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|241372728|gb|EER62455.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|258551685|gb|ACV74631.1| binding-protein-dependent transport systems inner membrane
           component [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 277

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 10/161 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +  G        +    Q++   P     PL++        +      +L+  G  + I 
Sbjct: 99  VLNGQFKIAEEILNTPIQMIRNVPHLALLPLILIWFGLGETSK----IILIALGCFFPIY 154

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G         E+   + +T    ++ II PG  P  + G   + G  W   IV+E
Sbjct: 155 LNSFYGIRHIDKKLLEMGKVYGLTHRETFQNIIFPGATPSIMVGIRQSLGRMWITLIVAE 214

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             +        +G+G     + E      +VL ++I     
Sbjct: 215 TVA------AKSGIGYMATNAREFMQIDIIVLTLIIYAVLG 249



 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 97/264 (36%), Gaps = 25/264 (9%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--------LDVHSLPQYASRTTL 70
           ++    F  +I II +L           + +   P +             L      ++L
Sbjct: 22  LWHRFLFPCLIPIIALLAWFFLTQGQNSESIFPTPQSVWHVTVRLTKNGVLWNNLWVSSL 81

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R ++  +I     F+   L  + +    +L   + +++++P L  L   +++F       
Sbjct: 82  RAIAGFIIGGGIGFLLGVLNGQFKIAEEILNTPIQMIRNVPHLALLPLILIWFGLG---- 137

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E + I  I     + +  + +  + +I + L E+ + + L+  + F  +  P + P
Sbjct: 138 ----ETSKIILIALGCFFPIYLNSFYGIRHIDKKLLEMGKVYGLTHRETFQNIIFPGATP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S+   W  ++ +E +          GIG     A +   +  I+  ++    
Sbjct: 194 SIMVGIRQSLGRMWITLIVAETVAAKS------GIGYMATNAREFMQIDIIVLTLIIYAV 247

Query: 251 VIFLYDQL---LFRPMIVWSNKFR 271
           +    D     + + ++ W   +R
Sbjct: 248 LGSFSDFAAAKIEKHLLRWHQNYR 271


>gi|222082005|ref|YP_002541370.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726684|gb|ACM29773.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 258

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  +    T+           IT+   V+  +I + + +  G+W+G  P ++  + PF +
Sbjct: 39  LDIVKQVTTWISDHGFYKHVGITLGETVLGYLIGTGLGVAAGVWLGLSPFVARVLDPFIK 98

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + A P  V  P+ V  +     +       L+ F T     FN + G            
Sbjct: 99  AVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF----FNAMQGVREVNPVILSNT 154

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                      R++  P    + ++   T+ G A   +I+ E          + GLG  I
Sbjct: 155 RILGAKRSDLLRHVYFPAAATWILSSLRTSVGFAVVGAIIGEYLG------ASAGLGYLI 208

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A S        V  G++I+  FVL ++  L
Sbjct: 209 ARSEGNFDAVGVFAGIIILAVFVLIIDLIL 238



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 17/237 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DIV  V   +  H   ++   T    +   +I              S  +  VL P
Sbjct: 36  PAPLDIVKQVTTWISDHGFYKHVGITLGETVLGYLIGTGLGVAAGVWLGLSPFVARVLDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +      V++       KV  A     F  F        F+  Q +  + 
Sbjct: 96  FIKAVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTF--------FNAMQGVREVN 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R           ++  P +   ++ ++  S+    F VV +   ++G+ +   
Sbjct: 148 PVILSNTRILGAKRSDLLRHVYFPAAATWILSSLRTSVG---FAVVGA---IIGEYLGAS 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRLERTT 276
            G+G  IA +    D + +   ++ +   + + D +L    R +I W      ER  
Sbjct: 202 AGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLILDVIERKLITWRPNAGEERPA 258


>gi|209547051|ref|YP_002278969.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538295|gb|ACI58229.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 267

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 89/246 (36%), Gaps = 15/246 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASII 400
           +  + W  VV    +   +      +    +       +      +++R+ V  ++ASI 
Sbjct: 31  IFFVVWAVVVQAGLVRPIFLPSPVAIVTRLWALGVEGTLFSDIAASVYRIGVGFLVASIS 90

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + VG+ IG     ++ I+PF   +   P   F PL +               L++  GT
Sbjct: 91  ALAVGVLIGNYRFWNAAIEPFLDFIRYMPVVAFVPLTILWAGTTDTQK----FLVIWIGT 146

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            +      +      P DF     +  ++  +    IILP   P        + G AW  
Sbjct: 147 FFQQALMFMDNIKRVPPDFIGFGRTVGLSDAKIVTRIILPSAAPQIWDTLRISLGWAWTW 206

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPL 577
            +++E+ +       ++GLG  I  +         +  ++++    L  +   +F+   +
Sbjct: 207 VVLAELVA------ASSGLGYRINVAQRYFQTDTAIGYIVVLGVLGLISDQIMKFVGKRM 260

Query: 578 YLYGTR 583
           + Y  +
Sbjct: 261 FRYEAK 266



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 88/239 (36%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
              F +V  ++    L        P  IV  +       +L    + +  R+    +++ 
Sbjct: 29  FAIFFVVWAVVVQAGLVRPIFLPSPVAIVTRLWALGVEGTLFSDIAASVYRIGVGFLVAS 88

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L    R     + P LD ++ +P++ F+  T+++       K +        
Sbjct: 89  ISALAVGVLIGNYRFWNAAIEPFLDFIRYMPVVAFVPLTILWAGTTDTQKFL-------- 140

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I+    +        ++  +P D     R+  LS  +    + +P + P +   + +S+
Sbjct: 141 VIWIGTFFQQALMFMDNIKRVPPDFIGFGRTVGLSDAKIVTRIILPSAAPQIWDTLRISL 200

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W +VV +E++          G+G  I +A +       +  ++ +  +  + DQ++
Sbjct: 201 GWAWTWVVLAELVAASS------GLGYRINVAQRYFQTDTAIGYIVVLGVLGLISDQIM 253


>gi|328542733|ref|YP_004302842.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326412478|gb|ADZ69541.1| ABC transporter, permease component [Polymorphum gilvum
           SL003B-26A1]
          Length = 284

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 82/255 (32%), Gaps = 22/255 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD-----------V 376
           PE  +     +R+     + W   +  +    A      +   F               V
Sbjct: 18  PERQIASDIGRRLCRDATLPWLGTLSFILFVEAVTRTDIVPQQFFPAPTIMFVTLAKQFV 77

Query: 377 LYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           L   WL    T++   V ++IA ++ I +GI +G    +   ++   + L   P+    P
Sbjct: 78  LPSFWLALWDTLWTWGVSLVIAGVLGIALGIAMGASRTVYYALRLVVEFLRPVPSVALIP 137

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            V+  +   + +       L  F   W IL   + G         + A SF     +   
Sbjct: 138 AVILVIGISYESK----IFLAAFAAFWPILIQSVYGMHDVEPLALDTARSFGFRPLQRLV 193

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I LP   PY  TG       A    +  E+       +   G+G  I E+ +  +    
Sbjct: 194 LISLPLALPYVATGIRIGSAVALIIVVTMEIV------IGVPGIGKIILEARQGANVERA 247

Query: 556 VLGVLIMCCFVLALN 570
              +L        LN
Sbjct: 248 YALILATGLLGWGLN 262



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 78/209 (37%), Gaps = 17/209 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T      ++VI+ +           SR +   L  +++ ++ +P +  +   ++     Y
Sbjct: 88  TLWTWGVSLVIAGVLGIALGIAMGASRTVYYALRLVVEFLRPVPSVALIPAVILVIGISY 147

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K        IF    +  W +       + ++     + +RSF     Q+   + +P 
Sbjct: 148 ESK--------IFLAAFAAFWPILIQSVYGMHDVEPLALDTARSFGFRPLQRLVLISLPL 199

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   + +  +     VV  E++      I +PGIG  I  A +  ++      +L 
Sbjct: 200 ALPYVATGIRIGSAVALIIVVTMEIV------IGVPGIGKIILEARQGANVERAYALILA 253

Query: 248 MLGVIFLYDQLLFRP---MIVWSNKFRLE 273
              + +  +  L R    ++ W   FR E
Sbjct: 254 TGLLGWGLNTGLARIEAQLLFWHPSFRKE 282


>gi|162448436|ref|YP_001610803.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
 gi|161159018|emb|CAN90323.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56']
          Length = 302

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 17/231 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +  + P  +V      +    L      +  R    + +      V A LA  +R    
Sbjct: 80  ARVLSAPWTVVTTAHELIADGRLLSNLLTSAQRAFLGLALGAGLGTVLALLAGLTRVGEA 139

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L   + I ++IP L  +   +++F      KV+   L  +  ++           + +L
Sbjct: 140 LLDGPVQIKRAIPTLALIPLLILWFGIGEQMKVLTIALGVVIPVYV--------HTHAAL 191

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             I     E++ + RL+ WQ    + +P ++PG +  + ++++G W  +V  E I     
Sbjct: 192 RTIDARYVELAETVRLTRWQFIRKVALPGALPGFLMGLRLAVTGAWLALVVVEQI----- 246

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                GIG  ++LA        IL  ++         D   +L+ R  + W
Sbjct: 247 -NATSGIGYMMSLARSYGQTEIILLGLVVYGLFGLASDSAVRLIERKALSW 296



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     +  R  + + + + +   + +  G      + +    Q+  A P     PL
Sbjct: 100 GRLLSNLLTSAQRAFLGLALGAGLGTVLALLAGLTRVGEALLDGPVQIKRAIPTLALIPL 159

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++               L +  G    +  +  A        + E+A +  +T W++ R 
Sbjct: 160 LILWFGIG----EQMKVLTIALGVVIPVYVHTHAALRTIDARYVELAETVRLTRWQFIRK 215

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LPG  P ++ G   A  GAW A +V E  +       T+G+G  ++ +   G    ++
Sbjct: 216 VALPGALPGFLMGLRLAVTGAWLALVVVEQIN------ATSGIGYMMSLARSYGQTEIIL 269

Query: 557 LGVLIMCCFVLALN 570
           LG+++   F LA +
Sbjct: 270 LGLVVYGLFGLASD 283


>gi|264679206|ref|YP_003279113.1| ABC transporter [Comamonas testosteroni CNB-2]
 gi|299531746|ref|ZP_07045148.1| ABC-transporter membrane subunit [Comamonas testosteroni S44]
 gi|262209719|gb|ACY33817.1| ABC-transporter membrane subunit [Comamonas testosteroni CNB-2]
 gi|298720187|gb|EFI61142.1| ABC-transporter membrane subunit [Comamonas testosteroni S44]
          Length = 280

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 95/261 (36%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P +  +                 +    P D++       +   L  +   +  R L
Sbjct: 33  RLLPWLLPVALIAAWQAASAYGWLSTRVLPAPLDVLRAAWALAESGELWTHVKVSAGRAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           + + I      +   L    R    +L   + ++++IP L  +   +++F          
Sbjct: 93  AGLAIGGSLGLLLGLLTGSLRWAETLLDSTIQMVRNIPALALIPLVILWFGID------- 145

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F I  S  + +  + +  + N+   L E+ RS+ L+ WQ +  + +P ++  ++
Sbjct: 146 -ESAKLFLISVSVFFPIYLNTFHGIRNVDPGLIEMGRSYGLTRWQLYRDIVLPGALSSIL 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+   W  ++ +E I          GIG     A +      +L  +L    +  
Sbjct: 205 VGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTDVVLVGILLYAILGK 258

Query: 254 LYDQL---LFRPMIVWSNKFR 271
           L D     L R  + W   ++
Sbjct: 259 LADVFARSLERWWLRWHPGYQ 279



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 86/259 (33%), Gaps = 22/259 (8%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLG 383
                  +L    R   +  + W   V  +A   A  + G++         DVL   W  
Sbjct: 15  PASPPVPRLELLARQFALRLLPWLLPVALIAAWQAASAYGWLSTRVLPAPLDVLRAAWAL 74

Query: 384 C----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                      ++  R +  + I   + + +G+  G      + +    Q++   PA   
Sbjct: 75  AESGELWTHVKVSAGRALAGLAIGGSLGLLLGLLTGSLRWAETLLDSTIQMVRNIPALAL 134

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PLV+                L+     + I  N   G         E+  S+ +T W+ 
Sbjct: 135 IPLVILWFGI----DESAKLFLISVSVFFPIYLNTFHGIRNVDPGLIEMGRSYGLTRWQL 190

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R I+LPG     + G   + G  W   IV+E  S         G+G     + E     
Sbjct: 191 YRDIVLPGALSSILVGLRFSLGLMWVILIVAETIS------AQAGIGYLTMNAREFLQTD 244

Query: 554 EVVLGVLIMCCFVLALNRF 572
            V++G+L+        + F
Sbjct: 245 VVLVGILLYAILGKLADVF 263


>gi|191639540|ref|YP_001988706.1| Glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus casei BL23]
 gi|190713842|emb|CAQ67848.1| Glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus casei BL23]
 gi|327383640|gb|AEA55116.1| Choline transporter [Lactobacillus casei LC2W]
 gi|327386832|gb|AEA58306.1| Choline transporter [Lactobacillus casei BD-II]
          Length = 510

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L     +     L A++I+++     A       +   VL+ +  ++Q+IP L
Sbjct: 8   ISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             L AI A+    +  +  + Y  L +I    EE + +F 
Sbjct: 68  ALLGLLIPFVGIG--------TLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  +K + + +P ++  ++  +  +M      ++ +  +     +I   G+G++I L I
Sbjct: 120 MSRLRKLFKVELPIALTVILSGVRTAM----VMIIGTATLAA---LIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D    L   L    +  ++  LL
Sbjct: 173 DRNDAALTLMGALAAALLAIVFSWLL 198



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+ +W+      ++ +     +L   P+     L++  V    L   +
Sbjct: 27  LIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G       ++E A +F ++  R    + LP      ++G 
Sbjct: 87  ALVVYALL----PIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALTVILSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG +I    ++  
Sbjct: 143 RTAMVMIIGTATLAALIGAG-------GLGTFILLGIDRND 176


>gi|86742250|ref|YP_482650.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. CcI3]
 gi|86569112|gb|ABD12921.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. CcI3]
          Length = 345

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 82/253 (32%), Gaps = 10/253 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    +R               +     + W        +    +++G  V+        
Sbjct: 41  RRPFAVRVWAASWPKLGALLLFLLLWQIVVWSGWKPSYVLPGPGEALGEFVDQLGSGHFW 100

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             +     T+ R +    +A +I   VGI +     + + +  F   +   P+ V+FPL 
Sbjct: 101 DAL---ARTLVRALEGYALAVLIGTVVGIAVSRFGVLRTAVGSFITAVQTMPSIVWFPLA 157

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V             +  +++ G    +   VI G    P    +V  S        +RY+
Sbjct: 158 VLLFKLS----ESAIMFVVVLGAAPSVANGVIYGVDYVPPLLVQVGRSMGARSLSLYRYV 213

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  + G       AW + +  E+      H      GA +  + E      V+ 
Sbjct: 214 VVPAALPSVLAGLKQGWAFAWRSLMAGELLVIVPGHPSV---GADLQNARELLDTVGVLA 270

Query: 558 GVLIMCCFVLALN 570
            ++ +    + ++
Sbjct: 271 SMITIFVIGVLID 283



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 11/215 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P + +      L         +RT +R L    +++L   V     ++   L   + 
Sbjct: 80  LPGPGEALGEFVDQLGSGHFWDALARTLVRALEGYALAVLIGTVVGIAVSRFGVLRTAVG 139

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             +  +Q++P + +    V+ F          +E A +F +      ++   +   +  +
Sbjct: 140 SFITAVQTMPSIVWFPLAVLLFKL--------SESAIMFVVVLGAAPSVANGVIYGVDYV 191

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L +V RS        + Y+ VP ++P ++  +    +  W  ++A E++V+   V  
Sbjct: 192 PPLLVQVGRSMGARSLSLYRYVVVPAALPSVLAGLKQGWAFAWRSLMAGELLVI---VPG 248

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            P +G+ +  A +  D + +L +M+T+  +  L D
Sbjct: 249 HPSVGADLQNARELLDTVGVLASMITIFVIGVLID 283


>gi|104782479|ref|YP_608977.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95111466|emb|CAK16186.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 248

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 13/203 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L      +  R    +++ +L       L A S     ++ P+   ++ +P+LG+
Sbjct: 44  LGNGELLVNLLASLARTSIGLLLGILGGVSLGALMALSPLANRLIAPLFHALRQVPMLGW 103

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +    ++  N    K++   LAA +         M  + ++ L  +     EV +   L 
Sbjct: 104 IPLIALWLGNGEAAKLLIVSLAAFY--------PMVLNTFEGLRQVDTRHREVGQVLALD 155

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ+   + +P ++P +   ++ +++  W   V SE+ +         G+G+ +  A   
Sbjct: 156 RWQQLRLVLLPAALPSIATGVLQALAFAWVTAVGSELFLASGA-----GLGNLMMNAEAG 210

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  I+  +L +    +L   L
Sbjct: 211 ARMEIIVICVLCIGLCGYLMTWL 233



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 9/193 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++ R  + +++  +  + +G  +   P  +  I P    L   P   + PL
Sbjct: 47  GELLVNLLASLARTSIGLLLGILGGVSLGALMALSPLANRLIAPLFHALRQVPMLGWIPL 106

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +     N      L++     + ++ N   G        +EV     +  W+  R 
Sbjct: 107 IALWLG----NGEAAKLLIVSLAAFYPMVLNTFEGLRQVDTRHREVGQVLALDRWQQLRL 162

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P   TG + A   AW  ++ SE+           GLG  +  +        +V
Sbjct: 163 VLLPAALPSIATGVLQALAFAWVTAVGSELFL-----ASGAGLGNLMMNAEAGARMEIIV 217

Query: 557 LGVLIMCCFVLAL 569
           + VL +      +
Sbjct: 218 ICVLCIGLCGYLM 230


>gi|162455353|ref|YP_001617720.1| putative ABC-transporter [Sorangium cellulosum 'So ce 56']
 gi|161165935|emb|CAN97240.1| putative ABC-transporter [Sorangium cellulosum 'So ce 56']
          Length = 507

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 84/203 (41%), Gaps = 17/203 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP+Y +      L A+ + +  +     L  +SRRL   ++ +  ++Q+IP L  L F V
Sbjct: 8   LPRYLAAHLGLTLVALALGVAVSVPLGVLVTRSRRLEGPVLGVASVVQTIPSLALLAFMV 67

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                L    +    L A+  +F   +  +  +    L  +   + E +R   ++  ++ 
Sbjct: 68  PVLAALGARSI--GYLPALIGLFLYSLLPVLRNTAAGLSGLDPAVIEAARGVGMTPREQL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIKEQ 236
             + +P ++P +V  +             + ++ VG       +  P +G YI   ++ +
Sbjct: 126 RRVELPLALPVIVAGVRT-----------AAVLTVGTATLSTPVGAPSLGDYIFSGLQTR 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           +  A+L   +   G+  + D L+
Sbjct: 175 NFTAVLIGCVASAGLALVLDGLV 197



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 74/216 (34%), Gaps = 9/216 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           + +  +       +   +V + +   + +P+G+ +     +   +   A ++   P+   
Sbjct: 3   EQLALLPRYLAAHLGLTLVALALGVAVSVPLGVLVTRSRRLEGPVLGVASVVQTIPSLAL 62

Query: 434 FPLVVSCVSYYHLNPNLWLSLLM--IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              +V  ++        +L  L+     +   +L N  AG S       E A    +T  
Sbjct: 63  LAFMVPVLAALGARSIGYLPALIGLFLYSLLPVLRNTAAGLSGLDPAVIEAARGVGMTPR 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
              R + LP   P  V G  TA        +++   +     +    LG YI    +  +
Sbjct: 123 EQLRRVELPLALPVIVAGVRTAA-------VLTVGTATLSTPVGAPSLGDYIFSGLQTRN 175

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           F  V++G +      L L+  +   L        RL
Sbjct: 176 FTAVLIGCVASAGLALVLDGLVRGLLAGVTRHSRRL 211


>gi|153008918|ref|YP_001370133.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151560806|gb|ABS14304.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 278

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T   +LSA  + +         AA    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WDRTLETLTLVLSACFLCMAIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G    AIF +            +  + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATAIFVLPAP-----VRLTHLGISSTPSSLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +  A+   +    
Sbjct: 202 KIELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRALNSVNTALG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ V  + D++ 
Sbjct: 255 FEAGLVIVVVAIVLDRIF 272



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 18/214 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   +   L        T+  V+    +   
Sbjct: 57  IAIFAVIAWLIQRRISVVVLTVIGFLFIINQGYWDRTLE-------TLTLVLSACFLCMA 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI    RP + + ++P   L+   P  V+    +       +   L  ++ ++  
Sbjct: 110 IGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATAIFVLPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                      G S+ P+   E   +F  +  +    I LP   P  + G       + +
Sbjct: 170 PVRL----THLGISSTPSSLIEAGEAFGASRSQLLWKIELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++ +           GLG  +  +    +  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRALNSVNTA 252


>gi|313763611|gb|EFS34975.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA1]
 gi|314914766|gb|EFS78597.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA4]
 gi|314919272|gb|EFS83103.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA1]
 gi|314920817|gb|EFS84648.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA3]
 gi|314930496|gb|EFS94327.1| ABC transporter, permease protein [Propionibacterium acnes
           HL067PA1]
 gi|314954346|gb|EFS98752.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA1]
 gi|314957469|gb|EFT01572.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA1]
 gi|315100454|gb|EFT72430.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA1]
 gi|327454990|gb|EGF01645.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA3]
 gi|327457721|gb|EGF04376.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA2]
 gi|328755176|gb|EGF68792.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA1]
 gi|328758344|gb|EGF71960.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA2]
          Length = 288

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDTETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L ++ V    D++
Sbjct: 258 GLAVVIVAVYLDRI 271



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +S  L +    V   +    A W+   + +  F     +        T+  VVV +I+A 
Sbjct: 49  LSKPLYLVMMVVFAAIGWSCANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILAL 108

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ IP+GIW       S+ I+P    +   P+  +   V+       +   +   +  + 
Sbjct: 109 ILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALP 168

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               +       G      +  E  ++F  +       I +P   P  + G       A 
Sbjct: 169 PGVRF----TELGIRGVDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLAL 224

Query: 519 NASIVS 524
           +  ++S
Sbjct: 225 SMVVLS 230


>gi|298253903|ref|ZP_06977490.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis 5-1]
 gi|297532046|gb|EFH71021.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis 5-1]
          Length = 271

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 85/226 (37%), Gaps = 10/226 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L +++F  +              I       +   ++    I++ RV++ +++  I  +
Sbjct: 32  ILVLWFFTTLSPTEDRSLPSPYEVIQAFIDLNNEGILLKSLGISILRVLLGLLLGIIFAV 91

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P GI  G     +  +   + +L + P     P+++  +             L+  G   
Sbjct: 92  PAGILAGGSKLGNIVVDKPSHMLRSIPFPALAPILIIFLGI----DETMKIALIAVGVFG 147

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N+  G     +   E+A  +H+     +  I+L G  P ++TG   A   AW A +
Sbjct: 148 PMYVNIRDGVRNIDSKLLELAQVYHVKKSTIFISILLRGTLPSFMTGLRFAISVAWVALV 207

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             E  +       + G+G  ++ + E     +++  V++     L 
Sbjct: 208 TCETVN------SSIGIGYILSRAQEFFRPDQMMACVIMYAIAGLG 247



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 83/235 (35%), Gaps = 14/235 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               +  +++     +     +    P +++       +   L +    + LR+L  +++
Sbjct: 26  WISTILILVLWFFTTLSPTEDRSLPSPYEVIQAFIDLNNEGILLKSLGISILRVLLGLLL 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++F      LA  S+   +V+     +++SIP        +++            E   
Sbjct: 86  GIIFAVPAGILAGGSKLGNIVVDKPSHMLRSIPFPALAPILIIFLGID--------ETMK 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I       M  ++   + NI   L E+++ + +     F  + +  ++P  +  +  
Sbjct: 138 IALIAVGVFGPMYVNIRDGVRNIDSKLLELAQVYHVKKSTIFISILLRGTLPSFMTGLRF 197

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           ++S  W  +V  E +          GIG  ++ A +      ++  ++       
Sbjct: 198 AISVAWVALVTCETVNSSI------GIGYILSRAQEFFRPDQMMACVIMYAIAGL 246


>gi|226308350|ref|YP_002768310.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226187467|dbj|BAH35571.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 285

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L  ++I +    +          L  +L P L  ++++P L +    V
Sbjct: 87  LWEHLYMTLRRVLVGVIIGVGLGVILGLAMGSVTWLRSLLEPWLTFLRALPPLAYFFLLV 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S  Q  
Sbjct: 147 IWLGIDEAPKITLLALAALPPAAVATTAAVVAAPVG--------LVEAARALGASRAQVI 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P     + +S+   +  VVA+E+         +PGIG  +  A    +   
Sbjct: 199 RDVVVPSALPETFTGIRLSVGMAYSSVVAAELF------NGIPGIGGMVKDASNYNNTPV 252

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  +  +     + D LL    R  + W  K
Sbjct: 253 VLVGIFAIGFSGLIIDGLLRAAERRAVPWRGK 284



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 97/270 (35%), Gaps = 25/270 (9%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-- 376
            +          +    +   +  +  I +  +    A    W           +     
Sbjct: 12  PVAEPNRKPRRPWTSSVTTVGLPVLSVIAFLALWQVAAASGTWSETFVPFPSTVWHAFVN 71

Query: 377 ------------LYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
                        Y++W    +T+ RV+V +II   + + +G+ +G    + S ++P+  
Sbjct: 72  TMTTHDGVRGYQGYLLWEHLYMTLRRVLVGVIIGVGLGVILGLAMGSVTWLRSLLEPWLT 131

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L A P   +F L+V  +          L+L  +            A   A P    E A
Sbjct: 132 FLRALPPLAYFFLLVIWLGIDEAPKITLLALAALPPAA----VATTAAVVAAPVGLVEAA 187

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   +  +  R +++P   P   TG   + G A+++ + +E+ +         G+G  +
Sbjct: 188 RALGASRAQVIRDVVVPSALPETFTGIRLSVGMAYSSVVAAELFNG------IPGIGGMV 241

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +++   + P V++G+  +    L ++  L
Sbjct: 242 KDASNYNNTPVVLVGIFAIGFSGLIIDGLL 271


>gi|269837527|ref|YP_003319755.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
 gi|269786790|gb|ACZ38933.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
          Length = 279

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 93/263 (35%), Gaps = 12/263 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV--CGVAIGIAWQSIGY 366
            S ++ +  R    +R +   N  ++     +  ++   W  +V    V I I       
Sbjct: 2   ASRSLAEQPRRAASLRRYMLRNRPEILLVPTIFVLIVAVWELLVKLLAVPIYILPPPTEI 61

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                       ++    +T+  V++   + S+  + VG+ +     +   + P+     
Sbjct: 62  WRAFRDGLGSGSLVEHTWVTLQEVLLGFAVGSVAGLVVGVIVTRFRLVERTVYPYVVAFQ 121

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL+V+   +   +  +  +        + +L NVIAG  +   D  ++  S 
Sbjct: 122 TVPKVALAPLIVTWFGFGMTSKVVTTA----LIAFFPLLVNVIAGLQSVDQDRIDLLRSV 177

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           + + W+ +R +  P   P+   G   A   +   +IVSE            GLG  I  +
Sbjct: 178 NASEWQIFRMVRFPSALPFIFAGLDVAIVFSVIGAIVSEFVG------ARAGLGYLIQVN 231

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
               +       ++++    L L
Sbjct: 232 NYNLNVSGTFAVLVVLSVMGLTL 254



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 98/275 (35%), Gaps = 25/275 (9%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIIN--------ILLHGIQETTVPRDIVDIVPIT 55
                  + R +  N  ++L    +  +I         +L   I     P +I       
Sbjct: 9   QPRRAASLRRYMLRNRPEILLVPTIFVLIVAVWELLVKLLAVPIYILPPPTEIWRAFRDG 68

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL ++   T   +L    +  +   V   +  + R +   + P +   Q++P +  
Sbjct: 69  LGSGSLVEHTWVTLQEVLLGFAVGSVAGLVVGVIVTRFRLVERTVYPYVVAFQTVPKVAL 128

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               V +F      KV+   L A F         +  ++   L ++ +D  ++ RS   S
Sbjct: 129 APLIVTWFGFGMTSKVVTTALIAFF--------PLLVNVIAGLQSVDQDRIDLLRSVNAS 180

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ F  +  P ++P +   + +++       + SE +          G+G  I +    
Sbjct: 181 EWQIFRMVRFPSALPFIFAGLDVAIVFSVIGAIVSEFVG------ARAGLGYLIQVNNYN 234

Query: 236 QDLL---AILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            ++    A+L  +  M   + L  Q + R ++ W 
Sbjct: 235 LNVSGTFAVLVVLSVMGLTLHLVVQWVNRRVVFWQ 269


>gi|229542095|ref|ZP_04431155.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Bacillus coagulans 36D1]
 gi|229326515|gb|EEN92190.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Bacillus coagulans 36D1]
          Length = 509

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 76/209 (36%), Gaps = 15/209 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I   +     L     +     L A+  SLL          + +++   ++ I  ++Q+I
Sbjct: 5   ITTFSNRRAQLLDALLQHIEISLIALFFSLLIAIPLGIYLTRKQKIAETIIGITGVLQTI 64

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   +  F            + A+ A+    +  +  + Y  +  I   L E +R
Sbjct: 65  PSLALLGLLIPLFGIG--------TVPAVIALVAYALLPLLRNTYTGIKEIDPSLLEAAR 116

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +  ++   +   + +P +MP ++  +  +          + +I  G       G+G  I 
Sbjct: 117 AMGMNRRIRLIKVELPLAMPVIMAGIRTAAILIIGTATIAALIGAG-------GLGDIIL 169

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L I   D   ++   +    +  L+D LL
Sbjct: 170 LGIDRNDYALVILGAIPAALLAILFDVLL 198



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  + +I IP+GI++  +  I+  I     +L   P+     L++       +   +
Sbjct: 27  LIALFFSLLIAIPLGIYLTRKQKIAETIIGITGVLQTIPSLALLGLLIPLFGIGTVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L    +      +L N   G         E A +  +        + LP   P  + G 
Sbjct: 87  ALVAYALL----PLLRNTYTGIKEIDPSLLEAARAMGMNRRIRLIKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG  I    ++  +  V+LG +      +  +
Sbjct: 143 RTAAILIIGTATIAALIGAG-------GLGDIILLGIDRNDYALVILGAIPAALLAILFD 195

Query: 571 RFLWH 575
             L  
Sbjct: 196 VLLRQ 200


>gi|297199685|ref|ZP_06917082.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197713944|gb|EDY57978.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 282

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +V          +LP     +  R  +   I L+   + A  A  SR    ++  
Sbjct: 64  PPPWTVVRTGVHLWTDGTLPTDVLTSLQRAAAGFAIGLVAGVLLALAAGLSRTGEALIDG 123

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++I ++IP LG +   +++       K+    +     I+         + + +L  I 
Sbjct: 124 TVNINRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYIPIY--------LNTHAALSGID 175

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E++    LS +     + VP ++PG    + + ++G W  +V  E I         
Sbjct: 176 HRFVELAEVQGLSRFAFVRQIVVPGALPGFFVGLRLGVTGSWLGLVVLEQI------NAT 229

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            G+G  +  A        IL  ++       + D   +L+ R ++ W
Sbjct: 230 SGLGYLMFQAQNYGQSDVILVGLVVYGVFGLVSDSAVRLVERRVLSW 276



 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
              +           +      ++ R      I  +  + + +  G      + I     
Sbjct: 67  WTVVRTGVHLWTDGTLPTDVLTSLQRAAAGFAIGLVAGVLLALAAGLSRTGEALIDGTVN 126

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P     PL +  +          +++++       I  N  A  S   + F E+A
Sbjct: 127 INRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYI----PIYLNTHAALSGIDHRFVELA 182

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++ + + R I++PG  P +  G      G+W   +V E  +       T+GLG  +
Sbjct: 183 EVQGLSRFAFVRQIVVPGALPGFFVGLRLGVTGSWLGLVVLEQIN------ATSGLGYLM 236

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
            ++   G    +++G+++   F L  +   R +   +  +
Sbjct: 237 FQAQNYGQSDVILVGLVVYGVFGLVSDSAVRLVERRVLSW 276


>gi|163814339|ref|ZP_02205728.1| hypothetical protein COPEUT_00490 [Coprococcus eutactus ATCC 27759]
 gi|158449974|gb|EDP26969.1| hypothetical protein COPEUT_00490 [Coprococcus eutactus ATCC 27759]
          Length = 272

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 66/194 (34%), Gaps = 10/194 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             I     Y     +     +++ R+++  +I  ++ I VGI    +  + +   P   L
Sbjct: 54  DIIKKAVEYAGDGTLWLHASVSIRRILLGFLIGGVLAITVGIIFANQKLVEAWFSPIINL 113

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L   P     P+++        +    ++         YI      G    P      A+
Sbjct: 114 LGPIPPYALLPIIIIWFGIGESSKIGLIAYCTFMTMLPYI----TDGLKNTPPVLIRAAT 169

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   T ++ +  ++LP   P    G        + A +VSE+         + GLG  I 
Sbjct: 170 SLGATQFQIFTRVMLPNAVPNIFVGMKVTLAMTFGALMVSEMLG------ASKGLGYMII 223

Query: 545 ESTEKGSFPEVVLG 558
            + +     ++ L 
Sbjct: 224 NAKQWFKMDDMFLA 237



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 19/228 (8%)

Query: 22  LLAFVLVIGIINIL-----LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           L+ F  +  I+  +         +    P DI+          +L  +AS +  R+L   
Sbjct: 24  LILFFAIWQIVTQMNQMHEWFNPKFLPAPTDIIKKAVEYAGDGTLWLHASVSIRRILLGF 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I  +       + A  + +     PI++++  IP    L   +++F           E 
Sbjct: 84  LIGGVLAITVGIIFANQKLVEAWFSPIINLLGPIPPYALLPIIIIWFGIG--------ES 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + I  I       M   +   L N P  L   + S   + +Q F  + +P ++P +   M
Sbjct: 136 SKIGLIAYCTFMTMLPYITDGLKNTPPVLIRAATSLGATQFQIFTRVMLPNAVPNIFVGM 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            ++++  +  ++ SEM+          G+G  I  A +   +  +  A
Sbjct: 196 KVTLAMTFGALMVSEMLGASK------GLGYMIINAKQWFKMDDMFLA 237


>gi|258418273|ref|ZP_05682538.1| osmoprotectant ABC transporter [Staphylococcus aureus A9763]
 gi|257839066|gb|EEV63545.1| osmoprotectant ABC transporter [Staphylococcus aureus A9763]
          Length = 504

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|282916061|ref|ZP_06323824.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus subsp. aureus D139]
 gi|283769885|ref|ZP_06342777.1| osmotically activated L-carnitine/choline ABC transporter permease
           OpuCB [Staphylococcus aureus subsp. aureus H19]
 gi|282320009|gb|EFB50356.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus subsp. aureus D139]
 gi|283460032|gb|EFC07122.1| osmotically activated L-carnitine/choline ABC transporter permease
           OpuCB [Staphylococcus aureus subsp. aureus H19]
          Length = 504

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|104782478|ref|YP_608976.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95111465|emb|CAK16185.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 253

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L  G+    L        P ++       L    L ++   +  R+        L
Sbjct: 14  LALLALWAGVAAAGLFPANLLVPPMEVWRSFADLLATGELQEHLLGSLSRLGLGFAGGAL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               + T  A SR +     P+   ++ +P +  +   V+        KV+     A F 
Sbjct: 74  AGLAFGTAMALSRTVEAYCSPLFHTVRQVPSIALIPMLVLLLGIDETFKVVIVAKTAFFP 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          +  + +  IPR+  EV+  +RL        + +P ++P +V  + ++++
Sbjct: 134 V--------ALATVEGIRAIPRNHFEVAAVYRLPWPTLVGRIALPAAVPAIVTGIRVALT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +VA E++          G+G  I +  +   +  ++  ++    + F  D   + 
Sbjct: 186 RAWVVLVACELLAADS------GLGQMIEMGRQMLRIDVVMVGVVLTGVIGFALDFSLRR 239

Query: 259 LFRPMIVWS 267
           L R +  W 
Sbjct: 240 LERRLSGWQ 248



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 86/244 (35%), Gaps = 19/244 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASI 399
           +    +  GVA    + +   +     ++    ++  G +      ++ R+ +     ++
Sbjct: 14  LALLALWAGVAAAGLFPANLLVPPMEVWRSFADLLATGELQEHLLGSLSRLGLGFAGGAL 73

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +  G  +     + +   P    +   P+    P++V  +         +  +++   
Sbjct: 74  AGLAFGTAMALSRTVEAYCSPLFHTVRQVPSIALIPMLVLLLGI----DETFKVVIVAKT 129

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +    + G  A P +  EVA+ + +        I LP   P  VTG   A   AW 
Sbjct: 130 AFFPVALATVEGIRAIPRNHFEVAAVYRLPWPTLVGRIALPAAVPAIVTGIRVALTRAWV 189

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHP 576
             +  E+ +        +GLG  I    +      V++GV++      AL+   R L   
Sbjct: 190 VLVACELLA------ADSGLGQMIEMGRQMLRIDVVMVGVVLTGVIGFALDFSLRRLERR 243

Query: 577 LYLY 580
           L  +
Sbjct: 244 LSGW 247


>gi|15923713|ref|NP_371247.1| choline transporter [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926400|ref|NP_373933.1| hypothetical protein SA0678 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282414|ref|NP_645502.1| hypothetical protein MW0685 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485595|ref|YP_042816.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57651559|ref|YP_185657.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus COL]
 gi|82750425|ref|YP_416166.1| glycine betaine/carnitine/choline ATP-binding ABC transport protein
           [Staphylococcus aureus RF122]
 gi|87162224|ref|YP_493410.1| osmoprotectant ABC transporter, permease [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88194497|ref|YP_499292.1| amino acid ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267182|ref|YP_001246125.1| substrate-binding region of ABC-type glycine betaine transport
           system [Staphylococcus aureus subsp. aureus JH9]
 gi|150393231|ref|YP_001315906.1| substrate-binding region of ABC-type glycine betaine transport
           system [Staphylococcus aureus subsp. aureus JH1]
 gi|151220903|ref|YP_001331725.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156979051|ref|YP_001441310.1| hypothetical protein SAHV_0720 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508987|ref|YP_001574646.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221140938|ref|ZP_03565431.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253315360|ref|ZP_04838573.1| osmoprotectant ABC transporter, permease [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253731346|ref|ZP_04865511.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253732833|ref|ZP_04866998.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255005514|ref|ZP_05144115.2| osmoprotectant ABC transporter, permease [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257794957|ref|ZP_05643936.1| osmoprotectant ABC transporter [Staphylococcus aureus A9781]
 gi|258421570|ref|ZP_05684495.1| osmoprotectant ABC transporter [Staphylococcus aureus A9719]
 gi|258430764|ref|ZP_05688476.1| choline transporter [Staphylococcus aureus A9299]
 gi|258441744|ref|ZP_05691016.1| glycine betaine/carnitine/choline ATP-binding ABC transporter
           [Staphylococcus aureus A8115]
 gi|258445815|ref|ZP_05693992.1| osmoprotectant ABC transporter [Staphylococcus aureus A6300]
 gi|258449626|ref|ZP_05697728.1| osmoprotectant ABC transporter [Staphylococcus aureus A6224]
 gi|258452931|ref|ZP_05700925.1| osmoprotectant ABC transporter [Staphylococcus aureus A5948]
 gi|258454026|ref|ZP_05701998.1| ABC transporter permease [Staphylococcus aureus A5937]
 gi|262048455|ref|ZP_06021340.1| hypothetical protein SAD30_2182 [Staphylococcus aureus D30]
 gi|262052786|ref|ZP_06024974.1| hypothetical protein SA930_0343 [Staphylococcus aureus 930918-3]
 gi|269202342|ref|YP_003281611.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus ED98]
 gi|282894488|ref|ZP_06302717.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A8117]
 gi|282922016|ref|ZP_06329713.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A9765]
 gi|282926586|ref|ZP_06334216.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A10102]
 gi|284023744|ref|ZP_06378142.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus 132]
 gi|294849392|ref|ZP_06790135.1| ABC transporter [Staphylococcus aureus A9754]
 gi|295406441|ref|ZP_06816247.1| osmotically activated L-carnitine/choline ABC transporter
           [Staphylococcus aureus A8819]
 gi|296274786|ref|ZP_06857293.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus MR1]
 gi|297245168|ref|ZP_06929042.1| osmotically activated L-carnitine/choline ABC transporter
           [Staphylococcus aureus A8796]
 gi|300912645|ref|ZP_07130088.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381662|ref|ZP_07364311.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|13700614|dbj|BAB41911.1| SA0678 [Staphylococcus aureus subsp. aureus N315]
 gi|14246492|dbj|BAB56885.1| choline transporter [Staphylococcus aureus subsp. aureus Mu50]
 gi|21203851|dbj|BAB94550.1| MW0685 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244038|emb|CAG42464.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57285745|gb|AAW37839.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus COL]
 gi|82655956|emb|CAI80360.1| glycine betaine/carnitine/choline ATP-binding ABC transport protein
           [Staphylococcus aureus RF122]
 gi|87128198|gb|ABD22712.1| osmoprotectant ABC transporter, permease [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202055|gb|ABD29865.1| amino acid ABC transporter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740251|gb|ABQ48549.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Staphylococcus aureus subsp. aureus JH9]
 gi|149945683|gb|ABR51619.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Staphylococcus aureus subsp. aureus JH1]
 gi|150373703|dbj|BAF66963.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721186|dbj|BAF77603.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160367796|gb|ABX28767.1| possible glycine betaine/carnitine/choline ABC superfamily ATP
           binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253725087|gb|EES93816.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253729198|gb|EES97927.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257788929|gb|EEV27269.1| osmoprotectant ABC transporter [Staphylococcus aureus A9781]
 gi|257842496|gb|EEV66920.1| osmoprotectant ABC transporter [Staphylococcus aureus A9719]
 gi|257849436|gb|EEV73406.1| choline transporter [Staphylococcus aureus A9299]
 gi|257852213|gb|EEV76140.1| glycine betaine/carnitine/choline ATP-binding ABC transporter
           [Staphylococcus aureus A8115]
 gi|257855391|gb|EEV78329.1| osmoprotectant ABC transporter [Staphylococcus aureus A6300]
 gi|257857134|gb|EEV80033.1| osmoprotectant ABC transporter [Staphylococcus aureus A6224]
 gi|257859442|gb|EEV82296.1| osmoprotectant ABC transporter [Staphylococcus aureus A5948]
 gi|257863891|gb|EEV86647.1| ABC transporter permease [Staphylococcus aureus A5937]
 gi|259159327|gb|EEW44383.1| hypothetical protein SA930_0343 [Staphylococcus aureus 930918-3]
 gi|259163543|gb|EEW48100.1| hypothetical protein SAD30_2182 [Staphylococcus aureus D30]
 gi|262074632|gb|ACY10605.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus ED98]
 gi|269940300|emb|CBI48677.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282591479|gb|EFB96551.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A10102]
 gi|282593674|gb|EFB98666.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A9765]
 gi|282763201|gb|EFC03332.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Staphylococcus aureus A8117]
 gi|285816424|gb|ADC36911.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus aureus 04-02981]
 gi|294823924|gb|EFG40350.1| ABC transporter [Staphylococcus aureus A9754]
 gi|294968586|gb|EFG44609.1| osmotically activated L-carnitine/choline ABC transporter
           [Staphylococcus aureus A8819]
 gi|297177839|gb|EFH37088.1| osmotically activated L-carnitine/choline ABC transporter
           [Staphylococcus aureus A8796]
 gi|300886891|gb|EFK82093.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302750620|gb|ADL64797.1| ABC-type proline/glycine betaine transport systems, permease
           component [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304339765|gb|EFM05710.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|312829215|emb|CBX34057.1| choline transport system permease protein opuBB [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315129399|gb|EFT85392.1| possible glycine betaine/carnitine/choline ABC superfamily ATP
           binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|315197700|gb|EFU28035.1| possible glycine betaine/carnitine/choline ABC superfamily ATP
           binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139946|gb|EFW31807.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320141965|gb|EFW33793.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329313444|gb|AEB87857.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Staphylococcus aureus subsp. aureus T0131]
 gi|329724504|gb|EGG61011.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728502|gb|EGG64935.1| ABC transporter, substrate-binding protein, QAT family
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329729684|gb|EGG66085.1| ABC transporter, substrate-binding protein, QAT family
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 504

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|298694052|gb|ADI97274.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus ED133]
 gi|323438929|gb|EGA96664.1| glycine betaine/carnitine/choline ATP-binding ABC transport protein
           [Staphylococcus aureus O11]
 gi|323441578|gb|EGA99227.1| glycine betaine/carnitine/choline ATP-binding ABC transport protein
           [Staphylococcus aureus O46]
          Length = 504

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|253997819|ref|YP_003049882.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|313199893|ref|YP_004038551.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
 gi|253984498|gb|ACT49355.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. SIP3-4]
 gi|312439209|gb|ADQ83315.1| binding-protein-dependent transport systems inner membrane
           component [Methylovorus sp. MP688]
          Length = 268

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 94/236 (39%), Gaps = 15/236 (6%)

Query: 23  LAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  VL+ G ++ + L   Q    P ++       L    L ++ S++  R+     +   
Sbjct: 32  VLLVLLWGWVSHLQLISPQLLASPLEVASTFQELLASGELQEHLSKSLSRLAFGYSLGAS 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  L A S+ +  +  P+   ++ IP +  +   ++        K+     A+ F 
Sbjct: 92  AGLLFGILMALSKNVEALCAPLFHGIRQIPTIALIPIFILLLGVDESFKIAIVIKASFFT 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          + Y++   +  +  EV+R ++L     +  + +P   P ++  + ++ +
Sbjct: 152 V--------ALAAYEATRGVSVNYLEVARVYKLPWTTLYGKVIIPAIFPPVLTGLRIAFA 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             W  +VA+E++V         G+G  + +      L  +L  ++    + F  D+
Sbjct: 204 RSWTVLVAAELLVADS------GLGQMMQMGRDMFRLDIVLVGVVLTGVIGFCIDR 253



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     + +   +  GI +    ++ +   P    +   P     P+ +  +    
Sbjct: 78  SLSRLAFGYSLGASAGLLFGILMALSKNVEALCAPLFHGIRQIPTIALIPIFILLLGV-- 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                +   ++I  + + +             ++ EVA  + +     +  +I+P IFP 
Sbjct: 136 --DESFKIAIVIKASFFTVALAAYEATRGVSVNYLEVARVYKLPWTTLYGKVIIPAIFPP 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   +W   + +E+       +  +GLG  +    +      V++GV++    
Sbjct: 194 VLTGLRIAFARSWTVLVAAELL------VADSGLGQMMQMGRDMFRLDIVLVGVVLTGVI 247

Query: 566 VLALNR 571
              ++R
Sbjct: 248 GFCIDR 253


>gi|227326219|ref|ZP_03830243.1| ABC transporter protein, membrane protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 254

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 17/251 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCG-----VAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            +++           +L +FW   V       + +    +++ Y+   F+   +   I  
Sbjct: 2   RQHWTSKLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVETLSYMFQSFSDASMRTDIG- 60

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T++R +     A++I +P+G+ +G    I   ++       + P++   PL +    
Sbjct: 61  --ATLYRTLAAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFG 118

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               N     +   +      ILFN   G           A    I+ W  ++ I+L   
Sbjct: 119 ITDANKIAISAFAAVLV----ILFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLES 174

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                 G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI 
Sbjct: 175 LAQTFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQVFNIRDMYASILIT 229

Query: 563 CCFVLALNRFL 573
                 LN   
Sbjct: 230 GALGYLLNVLF 240



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 95/259 (36%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +  +L F+     ++           P + +  +  +    S+      T  R L
Sbjct: 8   KLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVETLSYMFQSFSDASMRTDIGATLYRTL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   + L       +   + ++   L  ++D  +S P    +   ++ F      K+  
Sbjct: 68  AAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITDANKIAI 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  AA+  I         F+    + N  +     ++   +S W  F  + +  S+    
Sbjct: 128 SAFAAVLVI--------LFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQTF 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +T     G+G  I  A +  ++  +  ++L    + +
Sbjct: 180 VGLRTGVSMALVIVIVAEMFIGSET-----GLGHRIIDAQQVFNIRDMYASILITGALGY 234

Query: 254 LYDQLLF---RPMIVWSNK 269
           L + L     + ++ WS K
Sbjct: 235 LLNVLFLVVEKRIVHWSGK 253


>gi|209518160|ref|ZP_03266988.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209501367|gb|EEA01395.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 299

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 95/237 (40%), Gaps = 13/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ F L   +  + L        P D+       ++  +L +  S +  R  S  +I  +
Sbjct: 54  LVLFALWWLVSALRLVKSGLLVSPADVAHTAWQQIESGALLRALSASLAREASGFIIGTV 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  ++   SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 114 GGLLLGSVLGLSRIATRLIGPSFDTFKQISLFAWIPLISVWFGLGDMAKVVFLSLAALLP 173

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +PR   EV+R+ R S  Q   Y+ +P ++P +   + + + 
Sbjct: 174 VAAHTC--------DGIHAVPRSYIEVARALRYSRIQLIRYVILPAALPTIFTGLYLGLI 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +    +  + L
Sbjct: 226 YSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLFGIIVVGLTGWALNAL 277



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 96/279 (34%), Gaps = 26/279 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L    + L           P    ++ + +  + +  + W  +V  + +   W  +  + 
Sbjct: 10  LRRFFEPLRSAPPPCSCEAPARPTRVAALR--TLLAAVNWRGLVLPLVLFALWWLVSALR 67

Query: 369 N-----HFTYQDVLYVIWL----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                   +  DV +  W              ++ R     II ++  + +G  +G    
Sbjct: 68  LVKSGLLVSPADVAHTAWQQIESGALLRALSASLAREASGFIIGTVGGLLLGSVLGLSRI 127

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +  I P            + PL+        +   ++LS          +  +   G  
Sbjct: 128 ATRLIGPSFDTFKQISLFAWIPLISVWFGLGDMAKVVFLS----LAALLPVAAHTCDGIH 183

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P  + EVA +   +  +  RY+ILP   P   TG       +W A++ +E        
Sbjct: 184 AVPRSYIEVARALRYSRIQLIRYVILPAALPTIFTGLYLGLIYSWLATLGAEYLL----- 238

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  +G+G  + + +E+     V+ G++++     ALN  
Sbjct: 239 VAGSGIGNTLIDGSEQFRMDLVLFGIIVVGLTGWALNAL 277


>gi|49482979|ref|YP_040203.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424842|ref|ZP_05601269.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427510|ref|ZP_05603909.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430142|ref|ZP_05606526.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432843|ref|ZP_05609203.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435747|ref|ZP_05611795.1| ABC transporter permease [Staphylococcus aureus subsp. aureus M876]
 gi|282903351|ref|ZP_06311242.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905130|ref|ZP_06312988.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908107|ref|ZP_06315938.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910367|ref|ZP_06318171.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913561|ref|ZP_06321350.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282923479|ref|ZP_06331159.1| ABC transporter permease [Staphylococcus aureus subsp. aureus C101]
 gi|283957553|ref|ZP_06375006.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293500607|ref|ZP_06666458.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509554|ref|ZP_06668265.1| ABC transporter permease [Staphylococcus aureus subsp. aureus M809]
 gi|293524140|ref|ZP_06670827.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|295427299|ref|ZP_06819934.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590350|ref|ZP_06948989.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus MN8]
 gi|49241108|emb|CAG39786.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272412|gb|EEV04535.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275703|gb|EEV07176.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279339|gb|EEV09940.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282258|gb|EEV12393.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284938|gb|EEV15057.1| ABC transporter permease [Staphylococcus aureus subsp. aureus M876]
 gi|282314347|gb|EFB44737.1| ABC transporter permease [Staphylococcus aureus subsp. aureus C101]
 gi|282322593|gb|EFB52915.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282325759|gb|EFB56067.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327772|gb|EFB58054.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331955|gb|EFB61466.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596306|gb|EFC01267.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|283791004|gb|EFC29819.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290921103|gb|EFD98164.1| osmoprotectant ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291095612|gb|EFE25873.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467651|gb|EFF10166.1| ABC transporter permease [Staphylococcus aureus subsp. aureus M809]
 gi|295128687|gb|EFG58318.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576649|gb|EFH95364.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus MN8]
 gi|312438855|gb|ADQ77926.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|315194340|gb|EFU24732.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 504

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|297621325|ref|YP_003709462.1| Glycine betaine/carnitine/choline-binding protein precursor
           [Waddlia chondrophila WSU 86-1044]
 gi|297376626|gb|ADI38456.1| Glycine betaine/carnitine/choline-binding protein precursor
           [Waddlia chondrophila WSU 86-1044]
          Length = 498

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                + +    +I++         + K  R    +   ++I Q+IP L  L   +    
Sbjct: 10  LLEQVILVGLTTLIAICIGIPLGITSYKLPRFKPWIFSGINICQTIPSLALLACLIPLLG 69

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 ++   L AI          +  + Y  L  +P +  E +     + +QK   + 
Sbjct: 70  IGIKSALLTMTLYAIL--------PVVMNTYSGLEAVPPEQIEAADGLGFTPFQKLRIVE 121

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  M  +          +  I  G       G+G +I   I   ++  +LY 
Sbjct: 122 LPLAFPIMITGMRTAAVMSVGVATIASFIGAG-------GLGDFIFQGIATNNINTVLYG 174

Query: 245 MLTMLGVIFLYD 256
            +    +  L D
Sbjct: 175 AIPTAMMALLID 186



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 11/186 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V +  +IA  I IP+GI     P     I     +    P+      ++  +     +  
Sbjct: 17  VGLTTLIAICIGIPLGITSYKLPRFKPWIFSGINICQTIPSLALLACLIPLLGIGIKSAL 76

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L ++L  I      ++ N  +G  A P +  E A     T ++  R + LP  FP  +TG
Sbjct: 77  LTMTLYAIL----PVVMNTYSGLEAVPPEQIEAADGLGFTPFQKLRIVELPLAFPIMITG 132

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA   +   + ++     G       GLG +I +     +   V+ G +      L +
Sbjct: 133 MRTAAVMSVGVATIASFIGAG-------GLGDFIFQGIATNNINTVLYGAIPTAMMALLI 185

Query: 570 NRFLWH 575
           +     
Sbjct: 186 DYAFRK 191


>gi|239623114|ref|ZP_04666145.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522481|gb|EEQ62347.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 279

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D  Y+      ++  V++   +   + IP+GI +G+        +    ++   P   +
Sbjct: 78  PDRAYIWQHALASLKVVLIGGGLGVAVGIPLGILMGWYTRFDLFFKGIFDVIRPIPPIAW 137

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++V  +           + ++   +    + N  AG          VA  F  T  + 
Sbjct: 138 IPIMVVLLGIG----VKAKAAVIFLASVVPCVINTYAGIKQVNPVHIWVAQIFGATNLQM 193

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R I +P   P   TG   A   AW A + +E+ +       T GLG  I  S   G   
Sbjct: 194 LRTIGIPTAMPMIFTGVRVALNAAWMALVAAELLA------STQGLGYMIQISRTFGRPD 247

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            ++ G+  +    +  N  L
Sbjct: 248 IIIAGMFAIGVLSMLFNLVL 267



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 14/205 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + D   + Q+A  +   +L    + +        L     R  +    I D+++ IP + 
Sbjct: 77  SPDRAYIWQHALASLKVVLIGGGLGVAVGIPLGILMGWYTRFDLFFKGIFDVIRPIPPIA 136

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++   VV               A    IF + V     + Y  +  +      V++ F  
Sbjct: 137 WIPIMVVLLGIGV--------KAKAAVIFLASVVPCVINTYAGIKQVNPVHIWVAQIFGA 188

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    +G+P +MP +   + ++++  W  +VA+E++          G+G  I ++  
Sbjct: 189 TNLQMLRTIGIPTAMPMIFTGVRVALNAAWMALVAAELLA------STQGLGYMIQISRT 242

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
                 I+  M  +  +  L++ +L
Sbjct: 243 FGRPDIIIAGMFAIGVLSMLFNLVL 267


>gi|182677546|ref|YP_001831692.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633429|gb|ACB94203.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 266

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 13/202 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 LP+  + +  R L    +  +       L   S  L  ++ P  D ++ I I  
Sbjct: 59  EFAQGRLPRDIAASLTRDLLGFALGAMLGTSLGILLGLSSLLRHLIKPTFDALKQIAIFA 118

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           ++    V+F           E A I  I  +       +    +  IPR   EV++    
Sbjct: 119 WIPLVSVWFGIG--------EAAKIAFIAIAAFTPCLVNTLTGMAGIPRPYIEVAKVLDF 170

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S W     L +P ++P +   + + +   W   + +E  +        PGIG  +    +
Sbjct: 171 SPWSFLTRLAIPAALPSIFTGLHLGLIHSWLATIGAEYFMTAG-----PGIGGMMIAGRE 225

Query: 235 EQDLLAILYAMLTMLGVIFLYD 256
           + ++  +L  ++ +  +  L +
Sbjct: 226 QFEMDLVLLGVILLASIGVLLN 247



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 9/194 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R ++   + +++   +GI +G    +   I+P    L       + PL
Sbjct: 63  GRLPRDIAASLTRDLLGFALGAMLGTSLGILLGLSSLLRHLIKPTFDALKQIAIFAWIPL 122

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V             ++++          L N + G +  P  + EVA     + W +   
Sbjct: 123 VSVWFGIGEAAKIAFIAIAAFT----PCLVNTLTGMAGIPRPYIEVAKVLDFSPWSFLTR 178

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P   P   TG       +W A+I +E            G+G  +    E+     V+
Sbjct: 179 LAIPAALPSIFTGLHLGLIHSWLATIGAEYFMTAG-----PGIGGMMIAGREQFEMDLVL 233

Query: 557 LGVLIMCCFVLALN 570
           LGV+++    + LN
Sbjct: 234 LGVILLASIGVLLN 247


>gi|146282188|ref|YP_001172341.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145570393|gb|ABP79499.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|327480437|gb|AEA83747.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM
           4166]
          Length = 257

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 88/244 (36%), Gaps = 12/244 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W      +   +       +    T             +M R+      A +  I
Sbjct: 22  FILLIWQAAAWSLPAFLMPGIPTVVERLITTIQQPEFRDGLYGSMSRLGSGYGFALLFGI 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G+  G        ++    +L + P+  + PL +  + +     NL + +++     +
Sbjct: 82  GFGLVGGVLFFFREILRSAIVILQSIPSIAWVPLFLIVMGFG----NLPIIVVVALAAFF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +V+    +        A     + W+  R + LP + P  +TGA  A G AW A I
Sbjct: 138 PMALSVMNATESVQPVHVSAARVMGASRWQLLRRVYLPAVMPELITGAQLAFGNAWRALI 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
            +E+           GLG  +A S E      V++ +L++      +++ +   L  +  
Sbjct: 198 SAEMLIGFGQ-----GLGRSLAYSGEIADMVGVMMNILVIAILATLIDQVV---LEKFKQ 249

Query: 583 RCLR 586
           R LR
Sbjct: 250 RMLR 253



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 99/261 (37%), Gaps = 14/261 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            ++    +  +L  +L+       L       +P  +V+ +  T+           +  R
Sbjct: 10  PKKYLAVVLAILFILLIWQAAAWSLPAFLMPGIP-TVVERLITTIQQPEFRDGLYGSMSR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + S    +LLF   +  +         +L   + I+QSIP + ++   ++          
Sbjct: 69  LGSGYGFALLFGIGFGLVGGVLFFFREILRSAIVILQSIPSIAWVPLFLIVMG------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L  I  +  +  + M  S+  +  ++       +R    S WQ    + +P  MP 
Sbjct: 122 -FGNLPIIVVVALAAFFPMALSVMNATESVQPVHVSAARVMGASRWQLLRRVYLPAVMPE 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D++ ++  +L +  +
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGQ-----GLGRSLAYSGEIADMVGVMMNILVIAIL 235

Query: 252 IFLYDQLLFRPMIVWSNKFRL 272
             L DQ++         +++ 
Sbjct: 236 ATLIDQVVLEKFKQRMLRYQY 256


>gi|153010826|ref|YP_001372040.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151562714|gb|ABS16211.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 275

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   +  R+L A  I+ +       +   S  +  VL PI++  + +P L +L  
Sbjct: 75  STLAEHTLASLGRVLGAFAIACITAIPIGIMMGMSSFVRGVLDPIIEFYRPLPPLAYLPL 134

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E   +F IF +    M  +    + ++  +    + +   S  Q
Sbjct: 135 IIIWLGIG--------EFPKVFLIFLAIFAPMAIAARAGVRSVSTEQIHAAYAMGASRTQ 186

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +  +MP +   M + +  GW  +VA+EM+          G+G  +  A +    
Sbjct: 187 VITQVIMKAAMPEIFTGMRIGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAQFLAS 240

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++  ++ +    F +D L+    + +I W  K
Sbjct: 241 DTVIMGIIVIGVFAFAFDLLIRYMEKVLIPWKGK 274



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 13/184 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV+    IA I  IP+GI +G    +   + P  +     P   + PL++  +  
Sbjct: 82  LASLGRVLGAFAIACITAIPIGIMMGMSSFVRGVLDPIIEFYRPLPPLAYLPLIIIWLGI 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+       +     AG  +   +    A +   +  +    +I+    
Sbjct: 142 G----EFPKVFLIFLAIFAPMAIAARAGVRSVSTEQIHAAYAMGASRTQVITQVIMKAAM 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G  W   + +E+ +         GLG  +  + +  +   V++G++   
Sbjct: 198 PEIFTGMRIGIGVGWTTLVAAEMVA------AHRGLGFMVLNAAQFLASDTVIMGII--- 248

Query: 564 CFVL 567
              +
Sbjct: 249 VIGV 252


>gi|220932311|ref|YP_002509219.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219993621|gb|ACL70224.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 247

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 17/223 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-------GCITMFRVVVLI 394
            +L      VV  +   +A   +   V    ++ V  ++           ++++RV   +
Sbjct: 2   KLLRYLLVIVVLFIIWYMASILLNSPVLPSPFEVVSVLVKQRSILLTHLGVSLYRVGYGL 61

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +   +  +PVG+ +G    +   + P   L    P        +  V  +    N+    
Sbjct: 62  LFGLLTGVPVGLLLGRNKELDKVLSPVIYLGYPVPKIA----FLPLVLLFLGLGNMSKIF 117

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L+ F   + I+      A     +      S      + +R +I+P  FP   T    + 
Sbjct: 118 LIAFIVFFQIVVTTRDAAKNIDPELIISVKSLGAGSMQIYREVIIPATFPKIFTATRISI 177

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           G A     ++E  +         GLG +I +   + ++ E+  
Sbjct: 178 GTAIAVLFLTETFA------TFRGLGYFIMDCWTRVNYTEMYA 214



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 78/222 (35%), Gaps = 16/222 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  + +I  +  +L        P ++V ++     +  L  +   +  R+   ++  LL
Sbjct: 9   VIVVLFIIWYMASILLNSPVLPSPFEVVSVLVKQRSI--LLTHLGVSLYRVGYGLLFGLL 66

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L  +++ L  VL P++ +   +P +         F+ L    +    ++ IF 
Sbjct: 67  TGVPVGLLLGRNKELDKVLSPVIYLGYPVPKIA--------FLPLVLLFLGLGNMSKIFL 118

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +   +  NI  +L    +S      Q +  + +P + P +     +S+ 
Sbjct: 119 IAFIVFFQIVVTTRDAAKNIDPELIISVKSLGAGSMQIYREVIIPATFPKIFTATRISIG 178

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
                +  +E            G+G +I       +   +  
Sbjct: 179 TAIAVLFLTETFA------TFRGLGYFIMDCWTRVNYTEMYA 214


>gi|311067051|ref|YP_003971974.1| glycine betaine/L-proline ABC transporter binding protein [Bacillus
           atrophaeus 1942]
 gi|310867568|gb|ADP31043.1| glycine betaine/L-proline ABC transporter binding protein [Bacillus
           atrophaeus 1942]
          Length = 507

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 25/208 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L A+  +++ +        +   +   ++ I  ++Q+IP L  L  
Sbjct: 13  GQLVNALLEHIQISLIALFFAVIISIPLGIYLTRKPNISEGIIGITAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ AI A+    +  +  + Y  +  I   L E +R+  ++  +
Sbjct: 73  LIPIVGIG--------KVPAIIALIVYALLPILRNTYTGIKEIDPSLIEAARAMGMNNRK 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +F  + +P +MP ++  +  +M           +++VG   +    IG+      I L I
Sbjct: 125 RFLKVELPLAMPVIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +   I+   +    +  L+D LL R
Sbjct: 173 DRNNTALIVLGAIPAAILAILFDVLLRR 200



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II IP+GI++  +P+IS  I     +L   P+     L++  V        +
Sbjct: 27  LIALFFAVIISIPLGIYLTRKPNISEGIIGITAVLQTIPSLALLGLLIPIVGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +I      IL N   G         E A +  +   + +  + LP   P  + G 
Sbjct: 83  PAIIALIVYALLPILRNTYTGIKEIDPSLIEAARAMGMNNRKRFLKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +VLG +      +  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGDLIL-------LGIDRNNTALIVLGAIPAAILAILFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             L   L     + +
Sbjct: 196 VLL-RRLEKMSFKKI 209


>gi|302387520|ref|YP_003823342.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium saccharolyticum WM1]
 gi|302198148|gb|ADL05719.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium saccharolyticum WM1]
          Length = 521

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 74/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                     ++ +++L         + + +    ++ + +++Q+IP +  L F +    
Sbjct: 18  LIEHLKLTAVSVGLAILIGVPLGIFISYAAKASKPVLSVANVIQAIPSMALLGFLIPLLG 77

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      + AI A+    +  +  + Y  + NI     E +R   L+ +Q    + 
Sbjct: 78  IGI--------IPAIVAVVLYSLLPIIKNTYTGIENINPQTLEAARGIGLTPFQVLTKVQ 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + ++       V A  ++ +    I   G+G  +   I+  +   IL  
Sbjct: 130 IPLALPVIMAGVRIA------SVTAVGLMTMAAF-IGAGGLGYLVFSGIRTVNNNQILAG 182

Query: 245 MLTMLGVIFLYDQLL 259
            +    +  + D L+
Sbjct: 183 AVPACLLALMVDFLI 197



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 73/204 (35%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +   ++ L    +    V + +A +I +P+GI+I +    S  +   A ++ A P
Sbjct: 5   NYILSNYPQILSLLIEHLKLTAVSVGLAILIGVPLGIFISYAAKASKPVLSVANVIQAIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +      ++  +        +   + ++  +   I+ N   G         E A    +T
Sbjct: 65  SMALLGFLIPLLGIG----IIPAIVAVVLYSLLPIIKNTYTGIENINPQTLEAARGIGLT 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++    + +P   P  + G   A   A     ++     G       GLG  +      
Sbjct: 121 PFQVLTKVQIPLALPVIMAGVRIASVTAVGLMTMAAFIGAG-------GLGYLVFSGIRT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +  +++ G +  C   L ++  +
Sbjct: 174 VNNNQILAGAVPACLLALMVDFLI 197


>gi|255066447|ref|ZP_05318302.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sicca ATCC
           29256]
 gi|255049327|gb|EET44791.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sicca ATCC
           29256]
          Length = 509

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q         L A++ ++      A   A  RR    ++ I +I+Q+IP L  L 
Sbjct: 9   PAELWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQITNILQTIPSLALLG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +     P  +I   L A+  IF         + Y  L  I   ++E   +F LS W
Sbjct: 69  LLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLSQIDPAIKEAHTAFGLSRW 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q  W + +P ++P ++  +  +
Sbjct: 121 QALWRIELPMALPAMISGIRTA 142



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 5/150 (3%)

Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W   +   R+ ++ ++ ++ + +P+ +W+  +   +  +     +L   P+     L++
Sbjct: 12  LWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQITNILQTIPSLALLGLLI 71

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V        + L+L  +      I  N   G S      KE  ++F ++ W+    I 
Sbjct: 72  PFVGIGSPPVLIALTLYALL----PIFQNTYLGLSQIDPAIKEAHTAFGLSRWQALWRIE 127

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           LP   P  ++G  TA       + ++ +  
Sbjct: 128 LPMALPAMISGIRTASVLIIGTATLAALIG 157


>gi|89098811|ref|ZP_01171692.1| hypothetical protein B14911_05109 [Bacillus sp. NRRL B-14911]
 gi|89086487|gb|EAR65607.1| hypothetical protein B14911_05109 [Bacillus sp. NRRL B-14911]
          Length = 505

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 23/178 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+  ++L +        + +R    ++ +  ++Q+IP L  L   +  F        I
Sbjct: 27  FIALFFAVLISIPLGIYLTRHKRAAEAVIGVTAVLQTIPSLALLGLLIPLFG-------I 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   A+I  I  + +  +  + Y  +  +   L E +R+  ++ W++   + +P SMP +
Sbjct: 80  GKVPASIALIVYALL-PILRNTYTGIKEVEPSLIEAARAMGMNSWKRLVKVELPLSMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIKEQDLLAILYAML 246
           +  +  +M           +++VG       I   G+G  I L I   +   I+   +
Sbjct: 139 MAGIRTAM-----------VLIVGTATLAALIGAGGLGDIILLGIDRNNTSLIVLGAI 185



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A +I IP+GI++      +  +     +L   P+     L++       +  ++
Sbjct: 27  FIALFFAVLISIPLGIYLTRHKRAAEAVIGVTAVLQTIPSLALLGLLIPLFGIGKVPASI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALIVYALL----PILRNTYTGIKEVEPSLIEAARAMGMNSWKRLVKVELPLSMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            TA       + ++ +   G       GLG  I    ++ +   +VLG +
Sbjct: 143 RTAMVLIVGTATLAALIGAG-------GLGDIILLGIDRNNTSLIVLGAI 185


>gi|282854622|ref|ZP_06263957.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|282582204|gb|EFB87586.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|314923882|gb|EFS87713.1| ABC transporter, permease protein [Propionibacterium acnes
           HL001PA1]
 gi|314966061|gb|EFT10160.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA2]
 gi|315090758|gb|EFT62734.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA4]
 gi|315095007|gb|EFT66983.1| ABC transporter, permease protein [Propionibacterium acnes
           HL060PA1]
 gi|315104232|gb|EFT76208.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA2]
 gi|327328060|gb|EGE69829.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL103PA1]
          Length = 288

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDTETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L ++ V    D++
Sbjct: 258 GLAVVIVAVYLDRI 271



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +S  L +    V   +    A W+   + +  F     +        T+  VVV +I+A 
Sbjct: 49  LSKPLYLVMMAVFAAIGWACANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILAL 108

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ IP+GIW       S+ I+P    +   P+  +   V+       +   +   +  + 
Sbjct: 109 ILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALP 168

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               +       G      +  E  ++F  +       I +P   P  + G       A 
Sbjct: 169 PGVRF----TELGIRGVDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLAL 224

Query: 519 NASIVS 524
           +  ++S
Sbjct: 225 SMVVLS 230


>gi|254255390|ref|ZP_04948706.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124901127|gb|EAY71877.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 295

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 85/202 (42%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +   +L    + +L  FV  +LA  +R    +L  +  +   +P +  L  
Sbjct: 89  GELLAKTAISMSVLLRGYALGVLCAFVLTSLAVSTRIGRDLLAMLTSMFNPLPSIALLPI 148

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  +MY     +P  L+   R++ L+G +
Sbjct: 149 ALLWFGLGTG--------SLLFVLVHAVLWPLALNMYTGFAGVPVTLKMAGRNYGLTGLR 200

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E   
Sbjct: 201 QIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYT 258

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +   +  ++ +  L + L+F
Sbjct: 259 DRVFAGLAAVIVIGLLVENLVF 280



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 9/272 (3%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
            ++        R      F +      +    +I    V   + +     ++   V    
Sbjct: 28  AERAVPAPLWRRVVGAGWFRRGAIALALIAAWEIVARIVANDLLVPAFGATLAAFVQGIA 87

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++L    +    + R   L ++ + +   + +           +     +    P+  
Sbjct: 88  SGELLAKTAISMSVLLRGYALGVLCAFVLTSLAV---STRIGRDLLAMLTSMFNPLPSIA 144

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ +        +    L  +++    W +  N+  G +  P   K    ++ +TG R
Sbjct: 145 LLPIALLWFGLGTGS----LLFVLVHAVLWPLALNMYTGFAGVPVTLKMAGRNYGLTGLR 200

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I++P   P  ++G       AW   I +E+           GLG YI ++  +   
Sbjct: 201 QIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWYIFQNRNELYT 258

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             V  G+  +    L +   ++  L     R 
Sbjct: 259 DRVFAGLAAVIVIGLLVENLVFDTLERVTVRR 290


>gi|146342739|ref|YP_001207787.1| aliphatic sulfonate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146195545|emb|CAL79572.1| Putative ABC transporter, permease protein; putative aliphatic
           sulfonates transporter [Bradyrhizobium sp. ORS278]
          Length = 268

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 73/231 (31%), Gaps = 22/231 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGC----------ITMFRVVVLII 395
           W   +  + I  A    G +         DV    W             ++ +R  +  +
Sbjct: 24  WLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASIGFV 83

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I   I    G+  G     S       Q++   P     PLV+                L
Sbjct: 84  IGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLALIPLVILWFGI----DESAKLFL 139

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +  G  + +  N + G         E+   + +T    +R +I PG  P    G   A G
Sbjct: 140 VALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDGELFRRVIFPGALPSIFVGLRFALG 199

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             W   IV+E  +       ++GLG    ++ E      VVL +LI     
Sbjct: 200 IMWLTLIVAETIA------ASSGLGYMAMQAREFMQIDVVVLSILIYALLG 244



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 90/260 (34%), Gaps = 17/260 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
             P +  L   ++        L   +    P D+       L    L +    +  R   
Sbjct: 21  FLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASI 80

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             VI     F +      S+    +    L +++++P L  +   +++F           
Sbjct: 81  GFVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLALIPLVILWFGID-------- 132

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E A +F +     + +  +    +  +   L E+ R + ++  + F  +  P ++P +  
Sbjct: 133 ESAKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDGELFRRVIFPGALPSIFV 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W  ++ +E I          G+G     A +   +  ++ ++L    +  +
Sbjct: 193 GLRFALGIMWLTLIVAETIAASS------GLGYMAMQAREFMQIDVVVLSILIYALLGKV 246

Query: 255 YD---QLLFRPMIVWSNKFR 271
            D   +LL R  + W   F 
Sbjct: 247 ADSASRLLERLTLSWHPAFS 266


>gi|50842954|ref|YP_056181.1| glycine betaine transport system permease protein
           [Propionibacterium acnes KPA171202]
 gi|289426537|ref|ZP_06428280.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289428625|ref|ZP_06430308.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|295131025|ref|YP_003581688.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|50840556|gb|AAT83223.1| glycine betaine transport system permease protein
           [Propionibacterium acnes KPA171202]
 gi|289153265|gb|EFD01983.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289158023|gb|EFD06243.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|291376273|gb|ADE00128.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|313773548|gb|EFS39514.1| ABC transporter, permease protein [Propionibacterium acnes
           HL074PA1]
 gi|313794006|gb|EFS42030.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA1]
 gi|313801392|gb|EFS42643.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA2]
 gi|313807928|gb|EFS46409.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA2]
 gi|313811601|gb|EFS49315.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA1]
 gi|313813338|gb|EFS51052.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA1]
 gi|313816791|gb|EFS54505.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA1]
 gi|313819714|gb|EFS57428.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA2]
 gi|313822180|gb|EFS59894.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA1]
 gi|313823586|gb|EFS61300.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA2]
 gi|313825910|gb|EFS63624.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA1]
 gi|313829590|gb|EFS67304.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA2]
 gi|313831343|gb|EFS69057.1| ABC transporter, permease protein [Propionibacterium acnes
           HL007PA1]
 gi|313834953|gb|EFS72667.1| ABC transporter, permease protein [Propionibacterium acnes
           HL056PA1]
 gi|313839886|gb|EFS77600.1| ABC transporter, permease protein [Propionibacterium acnes
           HL086PA1]
 gi|314924669|gb|EFS88500.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA3]
 gi|314962061|gb|EFT06162.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA2]
 gi|314963640|gb|EFT07740.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA1]
 gi|314968528|gb|EFT12626.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA1]
 gi|314974218|gb|EFT18314.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA1]
 gi|314976672|gb|EFT20767.1| ABC transporter, permease protein [Propionibacterium acnes
           HL045PA1]
 gi|314978843|gb|EFT22937.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA2]
 gi|314984311|gb|EFT28403.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA1]
 gi|314986498|gb|EFT30590.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA2]
 gi|314990857|gb|EFT34948.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA3]
 gi|315079494|gb|EFT51487.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA2]
 gi|315081279|gb|EFT53255.1| ABC transporter, permease protein [Propionibacterium acnes
           HL078PA1]
 gi|315087163|gb|EFT59139.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA3]
 gi|315089333|gb|EFT61309.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA1]
 gi|315095357|gb|EFT67333.1| ABC transporter, permease protein [Propionibacterium acnes
           HL038PA1]
 gi|315099239|gb|EFT71215.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA2]
 gi|315106798|gb|EFT78774.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA1]
 gi|315109038|gb|EFT81014.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA2]
 gi|327328380|gb|EGE70142.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL096PA2]
 gi|327329753|gb|EGE71509.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL096PA3]
 gi|327334271|gb|EGE75985.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL097PA1]
 gi|327444165|gb|EGE90819.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA2]
 gi|327444954|gb|EGE91608.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA1]
 gi|327446439|gb|EGE93093.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA2]
 gi|327451973|gb|EGE98627.1| ABC transporter, permease protein [Propionibacterium acnes
           HL092PA1]
 gi|328752194|gb|EGF65810.1| ABC transporter, permease protein [Propionibacterium acnes
           HL020PA1]
 gi|328760038|gb|EGF73618.1| glycine betaine/L-proline ABC transporter, permease protein
           [Propionibacterium acnes HL099PA1]
 gi|332675905|gb|AEE72721.1| glycine betaine/L-proline transport system permease protein ProW
           [Propionibacterium acnes 266]
          Length = 288

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDTETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L ++ V    D++
Sbjct: 258 GLAVVIVAVYLDRI 271



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +S  L +    V   +    A W+   + +  F     +        T+  VVV +I+A 
Sbjct: 49  LSKPLYLVMMVVFAAIGWACANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILAL 108

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ IP+GIW       S+ I+P    +   P+  +   V+       +   +   +  + 
Sbjct: 109 ILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALP 168

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               +       G      +  E  ++F  +       I +P   P  + G       A 
Sbjct: 169 PGVRF----TELGIRGVDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLAL 224

Query: 519 NASIVS 524
           +  ++S
Sbjct: 225 SMVVLS 230


>gi|297208553|ref|ZP_06924982.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|296886808|gb|EFH25712.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           aureus subsp. aureus ATCC 51811]
          Length = 504

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|119384635|ref|YP_915691.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119374402|gb|ABL69995.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 283

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 91/235 (38%), Gaps = 16/235 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84
            LV  ++ + L    + +    ++  +     +         ++   +LSA V+ +    
Sbjct: 57  PLVFTLLAVALTWALQRSWKTCLLVALGFLFILNQGYWDATMQSLTLVLSACVVCMAIGV 116

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA   RL   + P+LD+MQ++P   +L   +V+F     G V G     IF +  
Sbjct: 117 PLGIAAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFG---IGMVPGLIATVIFVLPA 173

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                     +  + + P+ L E + +F  +  Q  W + +P +   ++  +  ++    
Sbjct: 174 P-----IRLTHLGISSTPKALVEAAIAFGATPRQLLWKVELPSATSQIMAGLNQTIMLSL 228

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VV + ++          G+G  +  A+   +      +   ++ V  + D++L
Sbjct: 229 SMVVIAALV-------GASGLGVPVVRALNSVNTALGFESGFIIVVVAIMLDRML 276



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 11/233 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + L      V    A+  +W++   +   F +            ++  V+   ++   I
Sbjct: 55  PHPLVFTLLAVALTWALQRSWKTCLLVALGFLFILNQGYWDATMQSLTLVLSACVVCMAI 114

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI    RP + + ++P   L+   P  V+    +       +   +   + ++   
Sbjct: 115 GVPLGIAAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPA- 173

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I      G S+ P    E A +F  T  +    + LP      + G       + + 
Sbjct: 174 --PIRL-THLGISSTPKALVEAAIAFGATPRQLLWKVELPSATSQIMAGLNQTIMLSLSM 230

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +++ +          +GLG  +  +    +         I+    + L+R L
Sbjct: 231 VVIAALVG-------ASGLGVPVVRALNSVNTALGFESGFIIVVVAIMLDRML 276


>gi|238060931|ref|ZP_04605640.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
 gi|237882742|gb|EEP71570.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
          Length = 294

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 13/253 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---- 379
           R       + + ++                 V     W S         +Q+++      
Sbjct: 27  RQKTTTRAVTIWASTWPKLAALAIAVGAWQVVVWAEVWPSYSLPGPGTVWQELVRQAGGA 86

Query: 380 -IWLGCITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +W G  T  R   V  + +  + + +G+ +     + + I      L   P+  +FPL 
Sbjct: 87  QLWDGLATTLRRAAVGYVFSVGVGLLLGLAVARFRVLRAAIGSMITALQTMPSIAWFPLA 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +  +++ G    I   VI+G    P   +    +    G   +RY+
Sbjct: 147 ILLFELS----EEAIFFVVVLGAAPSIANGVISGVDYVPPLLQRAGRNLGARGLNLYRYV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P  V G       +W + +  E+   G   +  T LGA +  + E    P ++ 
Sbjct: 203 IAPAALPAIVAGLKQGWAFSWRSLMAGELIVVG---ISQTSLGAQLTYARELADAPWLLS 259

Query: 558 GVLIMCCFVLALN 570
            ++++    L ++
Sbjct: 260 TMIVILVVGLGVD 272



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 89/243 (36%), Gaps = 12/243 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +P +  L   V    ++    +        P  +   +        L    + T  R  
Sbjct: 41  TWPKLAALAIAVGAWQVVVWAEVWPSYSLPGPGTVWQELVRQAGGAQLWDGLATTLRRAA 100

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              V S+    +     A+ R L   +  ++  +Q++P + +    ++ F          
Sbjct: 101 VGYVFSVGVGLLLGLAVARFRVLRAAIGSMITALQTMPSIAWFPLAILLFEL-------- 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E A  F +      ++   +   +  +P  L+   R+    G   + Y+  P ++P +V
Sbjct: 153 SEEAIFFVVVLGAAPSIANGVISGVDYVPPLLQRAGRNLGARGLNLYRYVIAPAALPAIV 212

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +    +  W  ++A E+IVVG +      +G+ +  A +  D   +L  M+ +L V  
Sbjct: 213 AGLKQGWAFSWRSLMAGELIVVGISQTS---LGAQLTYARELADAPWLLSTMIVILVVGL 269

Query: 254 LYD 256
             D
Sbjct: 270 GVD 272


>gi|307326565|ref|ZP_07605759.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306887759|gb|EFN18751.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 22/276 (7%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPITLD 57
           L  ++P    RR  P         L++ ++  +              P  I       L 
Sbjct: 5   LEPVVPLSARRRPVPRWLRRTTGPLLLLVLWQVSSATGVLPSDILASPGTIAGTASDLLK 64

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +LP     +  R+L  +VI  +     A ++  SR    ++   + +++SIP +G + 
Sbjct: 65  DGTLPHAMLVSVQRVLIGLVIGGVVGVALALISGLSRLGEDLVDASVQMLRSIPWVGMIP 124

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++            E   I  I     +++  ++Y  +  +   L E   +  L  W
Sbjct: 125 LFIIWMGIG--------EAPKIALIALGVTFHLYLNVYAGIRGVDAQLIEAGTALGLGRW 176

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
               ++ +P ++PG +  +  S++  W  +V       G+T+    GIG  +  A +   
Sbjct: 177 GLIRHVVLPGALPGAMTGLRYSLATAWLALV------FGETINADDGIGFLLNRAREFFQ 230

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270
              I+  ++    +  L D +   L R ++ W   F
Sbjct: 231 TDVIVVCLIVYAALGLLADFIVRTLERLLLQWRPNF 266



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 21/267 (7%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L   R   P    +      +  +  +     V    I  +  +I    +         
Sbjct: 10  PLSARRRPVPRWLRRTTGPLLLLVLWQVSSATGVLPSDILASPGTIAGTASDLLKD--GT 67

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +++ RV++ ++I  ++ + + +  G        +    Q+L + P     PL +
Sbjct: 68  LPHAMLVSVQRVLIGLVIGGVVGVALALISGLSRLGEDLVDASVQMLRSIPWVGMIPLFI 127

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L+  G  +++  NV AG         E  ++  +  W   R+++
Sbjct: 128 IWMGIGEA----PKIALIALGVTFHLYLNVYAGIRGVDAQLIEAGTALGLGRWGLIRHVV 183

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  +TG   +   AW A +  E  +         G+G  +  + E      +V+ 
Sbjct: 184 LPGALPGAMTGLRYSLATAWLALVFGETINADD------GIGFLLNRAREFFQTDVIVVC 237

Query: 559 VLIMCCFVLA-------LNRFL--WHP 576
           +++     L        L R L  W P
Sbjct: 238 LIVYAALGLLADFIVRTLERLLLQWRP 264


>gi|296116706|ref|ZP_06835316.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295976918|gb|EFG83686.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 254

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +    L  +VI  +   +   L      L  +L  ++ +++ IP L ++ F +++F    
Sbjct: 65  SLTHYLLGLVIGTVLGALVGLLCGAVGALDALLAGVVRVLRPIPGLAWVPFAILWFGLNT 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW-QKFWYLGVP 186
            G        A F I  S  W   ++ Y ++ +I  DL EV+ +F   G+  +   + +P
Sbjct: 125 AG--------ATFVIAISVFWINFYAAYGAVQSIDPDLYEVAAAFGHGGFAGRLMKVVLP 176

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S PGL+  +   +   W  VVA+E+  V       PGIG+ +  A        ++  ML
Sbjct: 177 ASAPGLLAGLRTGLGQAWMSVVAAELFGV-------PGIGARMMQASSLLATDLVVVYML 229

Query: 247 TMLGVIFLYDQLLF---RPMIVWS 267
           TM  +  L D L     R ++ W 
Sbjct: 230 TMALLYALTDMLFMVVRRRLLGWQ 253



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 87/249 (34%), Gaps = 14/249 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385
            ++ ++L        +L   W  VV    +          +      +V    W   I  
Sbjct: 5   RKSLIRLGLGAVGLGLLFGVWEAVVRLGWVPAGLLPAPSSLGPAWLDEVRNGAWQTAIRD 64

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   ++ ++I +++   VG+  G    + + +    ++L   P   + P  +       
Sbjct: 65  SLTHYLLGLVIGTVLGALVGLLCGAVGALDALLAGVVRVLRPIPGLAWVPFAILWFGL-- 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFP 504
                  + ++     W   +       +   D  EVA++F   G+      ++LP   P
Sbjct: 123 --NTAGATFVIAISVFWINFYAAYGAVQSIDPDLYEVAAAFGHGGFAGRLMKVVLPASAP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  T  G AW + + +E+           G+GA + +++   +   VV+ +L M  
Sbjct: 181 GLLAGLRTGLGQAWMSVVAAELFG-------VPGIGARMMQASSLLATDLVVVYMLTMAL 233

Query: 565 FVLALNRFL 573
                +   
Sbjct: 234 LYALTDMLF 242


>gi|302332432|gb|ADL22625.1| ABC-type proline/glycine betaine transport systems, permease
           component [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 504

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 SALLAIIFD-LILRFMAKLSYK 207



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPSALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|119945744|ref|YP_943424.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864348|gb|ABM03825.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 291

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T   ++ A    +L        AA   RL   + P+LD+MQ+IP   +L   + 
Sbjct: 106 WEETIETFSLIIYATGFCVLLGVPIGIAAAHRPRLYRFIRPLLDLMQTIPPFVYLIPALT 165

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            +  +  +P +L E  R+F  +      
Sbjct: 166 LFGL---GVVPGLISTIVFAIAAP-----IRLTHLGISQVPLELLEAGRAFGCTKRSLLL 217

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +M  +   +   +      VV S ++          G+G  +  A+   ++   
Sbjct: 218 KVEIPAAMSSIRAGITQCIMLSLSMVVISALV-------GADGLGKPVVRALNTVNIATG 270

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A L ++ V  + D++ 
Sbjct: 271 FEAGLAIVLVAIMLDRIF 288



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 75/230 (32%), Gaps = 16/230 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIP 403
           +  +  VA  I WQ     V  F    +L +  LG       T   ++       ++ +P
Sbjct: 70  WLFIIIVAGLIFWQQRNKAVTAFFILSLLLIWNLGYWEETIETFSLIIYATGFCVLLGVP 129

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP +   I+P   L+   P  V+    +  ++ + L     L   ++F     
Sbjct: 130 IGIAAAHRPRLYRFIRPLLDLMQTIPPFVYL---IPALTLFGLGVVPGLISTIVFAIAAP 186

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G S  P +  E   +F  T       + +P        G       + +  ++
Sbjct: 187 IRL-THLGISQVPLELLEAGRAFGCTKRSLLLKVEIPAAMSSIRAGITQCIMLSLSMVVI 245

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           S +           GLG  +  +    +        L +    + L+R  
Sbjct: 246 SALVG-------ADGLGKPVVRALNTVNIATGFEAGLAIVLVAIMLDRIF 288


>gi|170755239|ref|YP_001781270.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           B1 str. Okra]
 gi|169120451|gb|ACA44287.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium botulinum
           B1 str. Okra]
          Length = 527

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 11/193 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    +   ++ +++A  I +P+GI I     ++  +  FA L  A P+      +
Sbjct: 14  QILSLLVAHIELTLISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +       +     +++  +   IL N   G +    D  E A    +T  +  + I
Sbjct: 74  IPLIGIG----SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLI 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   A   A     ++     G       GLG  +    +      ++ 
Sbjct: 130 KIPLAMPIIMAGIRIASVTAVGLMTIAAFIGAG-------GLGYLVFSGIQTVDNNLILF 182

Query: 558 GVLIMCCFVLALN 570
           G +      L ++
Sbjct: 183 GAIPAAILALVID 195



 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 75/187 (40%), Gaps = 15/187 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L ++++++        +  K+++L   ++   ++ Q+IP L  L F +           
Sbjct: 26  TLISVLVAVAIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG----- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  +    +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP 
Sbjct: 81  ---SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPI 137

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++       V A  ++ +    I   G+G  +   I+  D   IL+  +    +
Sbjct: 138 IMAGIRIA------SVTAVGLMTIAAF-IGAGGLGYLVFSGIQTVDNNLILFGAIPAAIL 190

Query: 252 IFLYDQL 258
             + D +
Sbjct: 191 ALVIDWV 197


>gi|187929951|ref|YP_001900438.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|187726841|gb|ACD28006.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
          Length = 289

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV     +A++  IP+G+ +G        + P  +     P   + PLVV  +    
Sbjct: 98  SALRVFGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVVIWLGI-- 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++       I     AG  +   +    A +   +  +  R++ILP   P 
Sbjct: 156 --DERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVVRHVILPAALPE 213

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A G  W   + +E+ +       T G+G  +  ++       VV+G++++   
Sbjct: 214 ILTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDLVVMGIVLIGAI 267

Query: 566 VLALN 570
               +
Sbjct: 268 AWVFD 272



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   + LR+  A  ++ +           SR    +L P ++  + +P L +L   V
Sbjct: 91  LAAHLGWSALRVFGAFALAAVTAIPIGLAMGVSRTARGLLDPPIEFYRPLPPLAYLPLVV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            E A I  I+ +    +  +    + +   +    + +   S  Q  
Sbjct: 151 IWLGID--------ERAKIVVIYLACFAPIAMAARAGVRSATLEQINAAYALGASFTQVV 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  + +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 203 RHVILPAALPEILTGLRIAIGFGWTTLVAAEMVA------ATVGVGQMVLNASSFLRTDL 256

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++  ++ +  + +++D  +
Sbjct: 257 VVMGIVLIGAIAWVFDLAM 275


>gi|256847670|ref|ZP_05553115.1| ABC transporter permease component [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715359|gb|EEU30335.1| ABC transporter permease component [Lactobacillus coleohominis
           101-4-CHN]
          Length = 510

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 83/209 (39%), Gaps = 15/209 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
              +     ++ +   +     L A++I+++     A L    RR+    + +  I+Q+I
Sbjct: 6   AETLHTQQGAIIKATEQHISISLLALLIAIVIAIPLAILLKDHRRIAEACLQVAGIVQTI 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   +               + A+ A+    +  +  + Y  L  I  +LEE + 
Sbjct: 66  PSLAILGLLIPLVGIG--------TVPAVIALVLYAIMPIFQNTYAGLTQIAPNLEEAAT 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +F L+ W+K   L +P +MP ++  + +S+      ++ +  +        L    ++I 
Sbjct: 118 AFGLTKWKKLQRLELPLAMPMILSGIRISL----VMIIGTATLAALIGGGGLG---TFIL 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             I+  +   ++   +    + F +  LL
Sbjct: 171 TGIQSNNNTYVIIGAVLSAILAFFFSWLL 199



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+ I +     I+      A ++   P+     L++  V    +   +
Sbjct: 28  LLALLIAIVIAIPLAILLKDHRRIAEACLQVAGIVQTIPSLAILGLLIPLVGIGTVPAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  AG +    + +E A++F +T W+  + + LP   P  ++G 
Sbjct: 88  ALVLYAIM----PIFQNTYAGLTQIAPNLEEAATAFGLTKWKKLQRLELPLAMPMILSGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +        I +   +             +I    +  +   V++G ++        +
Sbjct: 144 RISL----VMIIGTATLAALIGGGGLG---TFILTGIQSNNNTYVIIGAVLSAILAFFFS 196

Query: 571 RFL 573
             L
Sbjct: 197 WLL 199


>gi|221212593|ref|ZP_03585570.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221167692|gb|EEE00162.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 280

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVISLL 81
                +  + +       +   P D V      L     L ++   +  R+L       L
Sbjct: 40  ALLFTLWSVGSARGWIAPQILPPPDQVYQALAELAASGDLLRHTLISLQRVLVGFAAGTL 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F        SRR    ++P  + +  IP+LG+L F ++      P K +         
Sbjct: 100 LGFAIGAALGLSRRFEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------L 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +  +T S  Q     P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +
Sbjct: 152 IAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQRIVHVVLPAAVPTLATGVRLAFT 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +V  E++   +      G+G  I    +   L  ++ A++ +  V  L ++LL
Sbjct: 212 KSWLALVVVELVASSE------GLGYLIVYGRQLFQLDLVMAAVVVVGAVGLLINRLL 263



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 90/261 (34%), Gaps = 21/261 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----- 378
                 +  +  + +R++++L  +    +      +               D +Y     
Sbjct: 13  PHALGASSRRRAAVKRLAWLLAPWALPALLFTLWSVGSARGWIAPQILPPPDQVYQALAE 72

Query: 379 ------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++    I++ RV+V     +++   +G  +G      + + P    L   P   
Sbjct: 73  LAASGDLLRHTLISLQRVLVGFAAGTLLGFAIGAALGLSRRFEAYVLPSFNALVQIPVLG 132

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P ++  V            LL+       +  + + G    P    EVA  F  T  +
Sbjct: 133 WLPFLLLLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQ 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              +++LP   P   TG   A   +W A +V E+ +       + GLG  I    +    
Sbjct: 189 RIVHVVLPAAVPTLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQL 242

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  V+++    L +NR L
Sbjct: 243 DLVMAAVVVVGAVGLLINRLL 263


>gi|260429849|ref|ZP_05783825.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260419332|gb|EEX12586.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 266

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 99/258 (38%), Gaps = 14/258 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  L   + +  +   L    Q    P D+V      L    L  +   T  R+L
Sbjct: 22  RVGVTVISLAGLLAIWIVAAALTADPQILPQPWDLVQPFAQALASGELLYHLGWTLSRVL 81

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +  +++        +  +   L   L P L +  ++P L  +    ++           
Sbjct: 82  WSFALAMSLGIALGLVMGRYEALNRWLDPWLVVFLNLPALVLIVLCYLWIGL-------- 133

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E AAI A+  +++ N+   + +    +   L+++++ +R+  W +  ++ +P   P + 
Sbjct: 134 TEAAAIAAVTLNKIPNVATVIREGARALDPGLDDMAQVYRMRRWTQMRHVVLPQLAPFIT 193

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 ++  W  V+  E +   +      G+G  I L  +  D+  +L    + + V+ 
Sbjct: 194 AAARSGVAVIWKIVLVVEFLGRSN------GVGFQIHLYFQLFDVGMVLVYAFSFIAVML 247

Query: 254 LYDQLLFRPMIVWSNKFR 271
             + L+ +P      ++R
Sbjct: 248 AVEWLVLQPWERRVRRWR 265



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 10/244 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +L I+           I  Q    +           +++    T+ RV+    +A  
Sbjct: 30  LAGLLAIWIVAAALTADPQILPQPWDLVQPFAQALASGELLYHLGWTLSRVLWSFALAMS 89

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I +G+ +G    ++  + P+  +    PA V   L    +              +   
Sbjct: 90  LGIALGLVMGRYEALNRWLDPWLVVFLNLPALVLIVLCYLWIGLTEA----AAIAAVTLN 145

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +   +  GA A      ++A  + +  W   R+++LP + P+    A +     W 
Sbjct: 146 KIPNVATVIREGARALDPGLDDMAQVYRMRRWTQMRHVVLPQLAPFITAAARSGVAVIWK 205

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             +V E         R+ G+G  I    +      V++        +LA+   +  P   
Sbjct: 206 IVLVVEFLG------RSNGVGFQIHLYFQLFDVGMVLVYAFSFIAVMLAVEWLVLQPWER 259

Query: 580 YGTR 583
              R
Sbjct: 260 RVRR 263


>gi|209547574|ref|YP_002279492.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538818|gb|ACI58752.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 284

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR++V  +IA    IP+G+ +G        +    +     P   + PL++  +  
Sbjct: 91  FASLFRIIVAALIAISAGIPIGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++      I  +  AG  + P +    A S   +  + +  I+LP   
Sbjct: 151 GETSK----ITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGASRLQLFIDIVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W   + +E+ +       T G+G  I  +++  +   V +G+ I+ 
Sbjct: 207 PEILTGIRIALGVGWGTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIGIIA 260

Query: 564 CFVLAL 569
                 
Sbjct: 261 ICAFTF 266



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL ++   +  R++ A +I++        L   +R    VL   ++    +P L +L  
Sbjct: 84  ASLSEHVFASLFRIIVAALIAISAGIPIGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +  +    +  S    + ++P +    +RS   S  Q
Sbjct: 144 MIIWLGIG--------ETSKITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGASRLQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + +++  GW  +VA+E+I          GIG  I  A +    
Sbjct: 196 LFIDIVLPSALPEILTGIRIALGVGWGTLVAAELIA------STRGIGFMIMSASQFLAT 249

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             +   +  +    F +    + L   ++ W  K
Sbjct: 250 DVVFVGIGIIAICAFTFSAAIRFLEAFLVPWKGK 283


>gi|24379531|ref|NP_721486.1| putative choline ABC transporter, osmoprotectant binding protein
           [Streptococcus mutans UA159]
 gi|24377473|gb|AAN58792.1|AE014947_4 putative choline ABC transporter, osmoprotectant binding protein
           [Streptococcus mutans UA159]
          Length = 506

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 72/179 (40%), Gaps = 21/179 (11%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A   +  +R+  +++ I  I Q+IP L  L   + +             + A+ A+ 
Sbjct: 38  VPLAIFISHRKRIAEIILQISGIFQTIPSLALLGLFIPFMGIG--------TVPAVAALV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +    L  I   L E  ++F ++ W++     +  +MP ++  +       
Sbjct: 90  IYALFPILQNTITGLTTIDPSLVEAGQAFGMTKWERLKKFELALAMPVIISGVR------ 143

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                A+ MI+   T   +I   G+GS+I L I   +   IL   ++   +  L++  +
Sbjct: 144 ----TAAVMIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGAISSALLAILFNLAI 198



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+ I+I  R  I+  I   + +    P+     L +  +    +     ++ L+I+   
Sbjct: 38  VPLAIFISHRKRIAEIILQISGIFQTIPSLALLGLFIPFMGIGTVP---AVAALVIY-AL 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N I G +       E   +F +T W   +   L    P  ++G  TA       +
Sbjct: 94  FPILQNTITGLTTIDPSLVEAGQAFGMTKWERLKKFELALAMPVIISGVRTAAVMIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 154 TLAALIGAG-------GLGSFILLGIDRNNTSLILIGAISSALLAILFN 195


>gi|89096764|ref|ZP_01169656.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL
           B-14911]
 gi|89088779|gb|EAR67888.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL
           B-14911]
          Length = 277

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L++    +     + T      + ++ I  D          T   +L++++IS++  
Sbjct: 51  ALLLILIFAGLAWWVSRWTIALFTAIGLLLI--DNLGYWDGTIDTLALVLASVIISIIIG 108

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                  ++S R   +L PILD MQ++P   +L   +++F     G V G   + IF   
Sbjct: 109 IPIGIWISQSDRAQSILTPILDFMQTMPAFVYLIPAIIFFG---IGVVPGIIASVIF--- 162

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +  +P DL E S +F  +  QK + + +P +M  ++  +  S+   
Sbjct: 163 --SMPPTIRLTNLGIRQVPEDLVEASDAFGSTPSQKLFKVQLPLAMNTIMAGINQSIMLA 220

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + ++         PG+G+ +  A+ +  +     A L ++ +  + D++
Sbjct: 221 LSMVVIASLV-------GAPGLGADVYRAVTQLKVGTGFEAGLAIVILAIVLDRI 268



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
           +L+     ++  +  G+AW    + +  FT   +L +  LG       T+  V+  +II+
Sbjct: 45  VLESIPALLLILIFAGLAWWVSRWTIALFTAIGLLLIDNLGYWDGTIDTLALVLASVIIS 104

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            II IP+GIWI       S + P    +   PA V+    +       +   +   +   
Sbjct: 105 IIIGIPIGIWISQSDRAQSILTPILDFMQTMPAFVYLIPAIIFFGIGVVPGIIASVIF-- 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +    +     G    P D  E + +F  T  +    + LP      + G   +   A
Sbjct: 163 --SMPPTIRLTNLGIRQVPEDLVEASDAFGSTPSQKLFKVQLPLAMNTIMAGINQSIMLA 220

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  +++ +           GLGA +  +  +          L +    + L+R 
Sbjct: 221 LSMVVIASLVG-------APGLGADVYRAVTQLKVGTGFEAGLAIVILAIVLDRI 268


>gi|288923813|ref|ZP_06417901.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288344840|gb|EFC79281.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 343

 Score = 98.1 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 88/236 (37%), Gaps = 12/236 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +P +     F+L+   +             P + +      L          RT  R  
Sbjct: 51  TWPKVAAFALFLLLWQAVVWSGWKPTYVLPGPDEALPEFFSQLGTADFWDALGRTLSRAG 110

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++++         A+   L   +   +  +Q++P + +    ++ F          
Sbjct: 111 QGYALAVVIGAAVGLAVARFALLRTAVGSFITALQTMPSIVWFPLAILLFQL-------- 162

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E A +F +      ++   +   +  +P  L  V RS    G+  + ++  P ++P ++
Sbjct: 163 SESAIMFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGAKGFALYRHVVAPAALPSVL 222

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             +    +  W  ++A E+IV+   V   P IG+ +  A    D + ++ +MLT+ 
Sbjct: 223 AGLKQGWAFAWRSLMAGELIVI---VPGHPSIGANLQNARDLSDTVGVMVSMLTIF 275



 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 81/247 (32%), Gaps = 14/247 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI------VNHFTYQDV 376
           I         +   +     +     F ++    +   W+    +      +  F  Q  
Sbjct: 35  IPVGEQRPLARRTWSATWPKVAAFALFLLLWQAVVWSGWKPTYVLPGPDEALPEFFSQLG 94

Query: 377 LYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
               W     T+ R      +A +I   VG+ +     + + +  F   L   P+ V+FP
Sbjct: 95  TADFWDALGRTLSRAGQGYALAVVIGAAVGLAVARFALLRTAVGSFITALQTMPSIVWFP 154

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +             +  +++ G    +   VI G    P     V  S    G+  +R
Sbjct: 155 LAILLFQLS----ESAIMFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGAKGFALYR 210

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++ P   P  + G       AW + +  E+      H     +GA +  + +      V
Sbjct: 211 HVVAPAALPSVLAGLKQGWAFAWRSLMAGELIVIVPGHPS---IGANLQNARDLSDTVGV 267

Query: 556 VLGVLIM 562
           ++ +L +
Sbjct: 268 MVSMLTI 274


>gi|148256185|ref|YP_001240770.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408358|gb|ABQ36864.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 260

 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 16/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +  R L    +      +   L   S     +     + ++ I +L ++  
Sbjct: 60  GELPHALAASLKRDLLGFALGAGVGILVGLLLGLSSIADRIFTTWFNGLKQIALLAWIPL 119

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F           E A I  I  +    +  +  + + +    L EV   FR SG Q
Sbjct: 120 ISLWFGFD--------EAAKIVFIALAASIPVILNTVEGVRSTSTKLREVGEVFRFSGPQ 171

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W L +P + P ++  + + +   W   + +E  +        PGIG  I    +  ++
Sbjct: 172 LVWSLYLPAATPSVLTGLHLGLIYAWLATIGAEYFMAAG-----PGIGGLIISGRERFEM 226

Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVWSN 268
             ++  ++ +  V F  D+    +   ++ W  
Sbjct: 227 ALVMLGIVVVGLVGFAVDRSASWIEHRLVRWRQ 259



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           V    +Q+V    +      ++ R ++   + + + I VG+ +G           +   L
Sbjct: 49  VAGVAWQEVANGELPHALAASLKRDLLGFALGAGVGILVGLLLGLSSIADRIFTTWFNGL 108

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  + PL+     +          + +       ++ N + G  +     +EV   
Sbjct: 109 KQIALLAWIPLISLWFGF----DEAAKIVFIALAASIPVILNTVEGVRSTSTKLREVGEV 164

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F  +G +    + LP   P  +TG       AW A+I +E            G+G  I  
Sbjct: 165 FRFSGPQLVWSLYLPAATPSVLTGLHLGLIYAWLATIGAEYFMAAG-----PGIGGLIIS 219

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR 571
             E+     V+LG++++     A++R
Sbjct: 220 GRERFEMALVMLGIVVVGLVGFAVDR 245


>gi|326329657|ref|ZP_08195979.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Nocardioidaceae bacterium Broad-1]
 gi|325952653|gb|EGD44671.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Nocardioidaceae bacterium Broad-1]
          Length = 293

 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 102/275 (37%), Gaps = 17/275 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R+        P   + +   +  + M+ +     V   A G    S+  I         
Sbjct: 28  RRSAVPRYARAPRQRVAMLPPRIWTVMIVVLLLLAVEAYARGGLVSSLDLIPVTDMAARS 87

Query: 377 L-------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           L       +++     T+  V V  + ++I+ +     +     I   +QP+  +  A P
Sbjct: 88  LELVQARDFLVGDLLRTLLIVAVTFVSSAILGVTTAYVMVQSTWIRQALQPYLNVFYAIP 147

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
               +P++V       L     + LL +  +   ++ N + G    P   ++++ S  + 
Sbjct: 148 TFALYPVLVVMFGTGAL----PIILLAVAFSVVVVISNSLVGFDTVPAIVRKLSRSLDLN 203

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             R +R I+LP   P  + G     G A  A + SE        L T GLG  +A++   
Sbjct: 204 PLRHFRLILLPSALPDILAGLKLGLGYAIIAVLASEFI------LATKGLGNTVADAYAS 257

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            + P++  GV+ +  F L  N  L   L  +  R 
Sbjct: 258 FNTPDMYAGVIFIAMFALGSNMLLGAALARFDWRR 292



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 97/267 (36%), Gaps = 22/267 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY-- 64
             P     + P        ++V+ ++ +  +         D++ +  +      L Q   
Sbjct: 37  RAPRQRVAMLPPRI-WTVMIVVLLLLAVEAYARGGLVSSLDLIPVTDMAARSLELVQARD 95

Query: 65  -----ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
                  RT L +    V S +     A +  +S  +   L P L++  +IP        
Sbjct: 96  FLVGDLLRTLLIVAVTFVSSAILGVTTAYVMVQSTWIRQALQPYLNVFYAIPTFALYPVL 155

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV F       ++ A   ++  + ++ +             +P  + ++SRS  L+  + 
Sbjct: 156 VVMFGTGALPIILLAVAFSVVVVISNSL--------VGFDTVPAIVRKLSRSLDLNPLRH 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P ++P ++  + + +      V+ASE I      +   G+G+ +A A    +  
Sbjct: 208 FRLILLPSALPDILAGLKLGLGYAIIAVLASEFI------LATKGLGNTVADAYASFNTP 261

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVW 266
            +   ++ +       + LL   +  +
Sbjct: 262 DMYAGVIFIAMFALGSNMLLGAALARF 288


>gi|311107093|ref|YP_003979946.1| binding-protein-dependent transporter inner membrane component
           family protein 48 [Achromobacter xylosoxidans A8]
 gi|310761782|gb|ADP17231.1| binding-protein-dependent transport system inner membrane component
           family protein 48 [Achromobacter xylosoxidans A8]
          Length = 269

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 86/235 (36%), Gaps = 13/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A ++   +  +          P  ++D     +    L +  S +  R  +   I  +
Sbjct: 30  VAAILVWWALARLDWVSTPLLVSPGKVLDTAASQISSGRLWRALSASLAREFTGFAIGTV 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L         ++ P  +  + I +  ++    V+F      KV    LAA+  
Sbjct: 90  LGLILGALLGLLPLFNRIVGPSFNTFKQISLFAWIPLISVWFGLGDVAKVTFLSLAALVP 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          +    + + P  L EV+R F  S WQ   ++ +P + P +   + +++ 
Sbjct: 150 V--------VVNTCDGIRSTPTALLEVARVFGYSRWQTLLHVVLPSAAPSIFTGVYLALI 201

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W   + +E ++V        GIG+ +    +   +  +++ M  +  V +  +
Sbjct: 202 YSWLATIGAEYLLVAGH-----GIGNTLIEGSEHFQMDLVIFGMFVIGLVGWTMN 251



 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 90/263 (34%), Gaps = 27/263 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV---------------L 377
              + +R S  L   W  +V  VA  + W ++  +    T   V                
Sbjct: 8   SPPAARRASRWLQARWRGLVLPVAAILVWWALARLDWVSTPLLVSPGKVLDTAASQISSG 67

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++ R      I +++ + +G  +G  P  +  + P            + PL+
Sbjct: 68  RLWRALSASLAREFTGFAIGTVLGLILGALLGLLPLFNRIVGPSFNTFKQISLFAWIPLI 127

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                   +    +LS          ++ N   G  + P    EVA  F  + W+   ++
Sbjct: 128 SVWFGLGDVAKVTFLS----LAALVPVVVNTCDGIRSTPTALLEVARVFGYSRWQTLLHV 183

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P   TG   A   +W A+I +E        +   G+G  + E +E      V+ 
Sbjct: 184 VLPSAAPSIFTGVYLALIYSWLATIGAEYLL-----VAGHGIGNTLIEGSEHFQMDLVIF 238

Query: 558 GVLIMCCFVLALN---RFLWHPL 577
           G+ ++      +N   R L   L
Sbjct: 239 GMFVIGLVGWTMNAWARALERRL 261


>gi|290580468|ref|YP_003484860.1| putative choline ABC transporter osmoprotectant binding protein
           [Streptococcus mutans NN2025]
 gi|254997367|dbj|BAH87968.1| putative choline ABC transporter osmoprotectant binding protein
           [Streptococcus mutans NN2025]
          Length = 502

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 72/179 (40%), Gaps = 21/179 (11%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A   +  +R+  +++ I  I Q+IP L  L   + +             + A+ A+ 
Sbjct: 34  VPLAIFISHRKRIAEIILQISGIFQTIPSLALLGLFIPFMGIG--------TVPAVAALV 85

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +    L  I   L E  ++F ++ W++     +  +MP ++  +       
Sbjct: 86  IYALFPILQNTITGLTTIDPSLVEAGQAFGMTKWERLKKFELALAMPVIISGVR------ 139

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                A+ MI+   T   +I   G+GS+I L I   +   IL   ++   +  L++  +
Sbjct: 140 ----TAAVMIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGAISSALLAILFNLAI 194



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+ I+I  R  I+  I   + +    P+     L +  +    +     ++ L+I+   
Sbjct: 34  VPLAIFISHRKRIAEIILQISGIFQTIPSLALLGLFIPFMGIGTVP---AVAALVIY-AL 89

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N I G +       E   +F +T W   +   L    P  ++G  TA       +
Sbjct: 90  FPILQNTITGLTTIDPSLVEAGQAFGMTKWERLKKFELALAMPVIISGVRTAAVMIIGTA 149

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            ++ +   G       GLG++I    ++ +   +++G +      +  N
Sbjct: 150 TLAALIGAG-------GLGSFILLGIDRNNTSLILIGAISSALLAILFN 191


>gi|254719609|ref|ZP_05181420.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Brucella sp. 83/13]
 gi|265984617|ref|ZP_06097352.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306837899|ref|ZP_07470759.1| choline ABC transporter, permease protein [Brucella sp. NF 2653]
 gi|264663209|gb|EEZ33470.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306406987|gb|EFM63206.1| choline ABC transporter, permease protein [Brucella sp. NF 2653]
          Length = 278

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +   +T   +LS+  + ++         A    L   + P+LD+MQ++P   +L   +V
Sbjct: 90  WEPTLKTLTLVLSSCFVCMVIGVPLGIAVAHRPALYAAMRPVLDLMQTLPTFVYLIPAIV 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     IF I               + + P  L E   +F  S  Q  W
Sbjct: 150 FFG---IGMVPGLLATVIFVIPAP-----IRLTQLGISSTPASLIEAGEAFGASRSQLLW 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P++MP ++  +  ++      VV + ++          G+G  +   +   ++   
Sbjct: 202 KVELPYAMPQILAGLTQTIMLSLSMVVIAALV-------GADGLGVPVVRGLNSVNISLG 254

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A   ++ V  + D++ 
Sbjct: 255 FEAGFIIVVVAIVLDRIF 272



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 18/234 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++    I W        + +      +I+N   ++  L        T+  V+    +  +
Sbjct: 57  IAIFAIIAWLIQRRISVVLLTILGFLFIINQGYWEPTLK-------TLTLVLSSCFVCMV 109

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GI +  RP + + ++P   L+   P  V+    +       +   L   + +I  
Sbjct: 110 IGVPLGIAVAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLLATVIFVIPA 169

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I      G S+ P    E   +F  +  +    + LP   P  + G       + +
Sbjct: 170 ---PIRL-TQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++ +           GLG  +       +         I+    + L+R  
Sbjct: 226 MVVIAALVG-------ADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272


>gi|168208864|ref|ZP_02634489.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170712906|gb|EDT25088.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 517

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|187919087|ref|YP_001888118.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
 gi|187717525|gb|ACD18748.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 306

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ RV     +A +  IPVG+ +G          P  +     P   + PL++     
Sbjct: 113 GISLLRVFGAFALACVTAIPVGVMMGVSRFARGAFDPPIEFYRPLPPLAYLPLIIIWFGI 172

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      LL+       +     AG  +   +    A S   +  +   Y+IL    
Sbjct: 173 GEFSK----VLLIYLAIFAPLAIAARAGVRSVSIEQIHAAYSMGASRTQVVLYVILKSAM 228

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG     G  W   + +E+ +        +GLG  +  + E  +   V++G++++ 
Sbjct: 229 PEIFTGMRIGIGVGWTTLVAAEMVA------SNSGLGFMVLNAAEFLASDVVIMGIIVI- 281

Query: 564 C 564
            
Sbjct: 281 - 281



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 98/261 (37%), Gaps = 24/261 (9%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASRTTLR 71
           ++  + AF+ +       LH I+   +P         + +        +L Q+   + LR
Sbjct: 60  SLITVAAFIALW-FAATNLHWIKPLFLPSPQAVYAKFIYVATEGFANSTLAQHTGISLLR 118

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A  ++ +       +   SR       P ++  + +P L +L   +++F        
Sbjct: 119 VFGAFALACVTAIPVGVMMGVSRFARGAFDPPIEFYRPLPPLAYLPLIIIWFGIG----- 173

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + +  I+ +    +  +    + ++  +    + S   S  Q   Y+ +  +MP 
Sbjct: 174 ---EFSKVLLIYLAIFAPLAIAARAGVRSVSIEQIHAAYSMGASRTQVVLYVILKSAMPE 230

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   M + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +   
Sbjct: 231 IFTGMRIGIGVGWTTLVAAEMVASNS------GLGFMVLNAAEFLASDVVIMGIIVIGFF 284

Query: 252 IFLYDQL---LFRPMIVWSNK 269
              +D L   + R ++ W  K
Sbjct: 285 ALCFDLLMRYIERVLVPWKGK 305


>gi|91778720|ref|YP_553928.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91691380|gb|ABE34578.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 323

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +++S+I +P+GI  G    I+   +PF +     PA  F  L+V+ +  Y 
Sbjct: 130 SIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD 189

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +      +   ++++PGI P 
Sbjct: 190 GPK----IAIIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPD 245

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI +      F  V   ++++   
Sbjct: 246 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYITQQARYTHFENVYAAIMMIGII 299

Query: 566 VLALN-RFLW--HPLYLY 580
            L  +    W    L+ +
Sbjct: 300 GLGTDLVLAWLGRKLFPW 317



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 66/214 (30%), Gaps = 14/214 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + D   L Q    +   +    V+S +       +      +  +  P  +
Sbjct: 108 YTAFTTPPASRDGVWLHQSLWHSIQVIFWGFVLSSVIGVPIGIVCGTYSAIARLQEPFFE 167

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I    ++     +  +   +   L
Sbjct: 168 FFRYLPAPAFGALMVAILGIYDGPK--------IAIIVIGTLFQQVLIVANTTRKLEYGL 219

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +      +   ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 220 FEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 273

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             YI    +      +  A++ +  +    D +L
Sbjct: 274 TWYITQQARYTHFENVYAAIMMIGIIGLGTDLVL 307


>gi|145589369|ref|YP_001155966.1| binding-protein-dependent transport systems inner membrane
           component [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047775|gb|ABP34402.1| binding-protein-dependent transport systems inner membrane
           component [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 257

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 77/214 (35%), Gaps = 15/214 (7%)

Query: 366 YIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
               + T++ + ++   G I      T+ R     +IA +I +P+G+ +G        ++
Sbjct: 39  LPAPNATFEYMGHLFVTGAIFKDLWATVLRTFYAFLIACVIGVPLGVILGSSVPAYRSVE 98

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
                  + P++   PL +       +N       +  F     ILFN   G        
Sbjct: 99  FLIDFFRSTPSSALIPLFMLIFGITDINK----IAIAAFAAVLVILFNSAYGVMNAKKTR 154

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A +  I+ +  ++ ++L    P    G  T    A    IV+E+           GL
Sbjct: 155 VMAAKTMGISNFHIFKDVLLMESLPQTFVGLRTGVSLALVIVIVAEMFIGSE-----AGL 209

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I ++ +  +  ++   +LI      ALN   
Sbjct: 210 GHRIIDAQQVFNIKDMYSSILITGALGYALNLIF 243



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 82/231 (35%), Gaps = 16/231 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P    + +       ++ +    T LR   A +I+ +       +   S      + 
Sbjct: 39  LPAPNATFEYMGHLFVTGAIFKDLWATVLRTFYAFLIACVIGVPLGVILGSSVPAYRSVE 98

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++D  +S P    +   ++ F      K+  A  AA+  I         F+    + N 
Sbjct: 99  FLIDFFRSTPSSALIPLFMLIFGITDINKIAIAAFAAVLVI--------LFNSAYGVMNA 150

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +     +++  +S +  F  + +  S+P     +   +S     V+ +EM +  +    
Sbjct: 151 KKTRVMAAKTMGISNFHIFKDVLLMESLPQTFVGLRTGVSLALVIVIVAEMFIGSEA--- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             G+G  I  A +  ++  +  ++L    + +  + +       ++ WS K
Sbjct: 208 --GLGHRIIDAQQVFNIKDMYSSILITGALGYALNLIFMATESKLVHWSGK 256


>gi|325525611|gb|EGD03391.1| ABC nitrate/sulfonate/bicarbonate family transporter inner membrane
           subunit [Burkholderia sp. TJI49]
          Length = 274

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 92/255 (36%), Gaps = 18/255 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQ 63
             ++RR     +  L   L    I   +             P D++      +   +L +
Sbjct: 16  AVVTRRRHAPDWRGLVLPLAAVAIWWAIASAHLVNSGLLVSPADVLRTAWTQITSGALAR 75

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             S +  R      I      +       SR    ++ P  D  + I +  ++    V+F
Sbjct: 76  ALSASLAREARGFAIGATGGLLLGAALGLSRVATRIVGPSFDTFKQISLFAWIPLISVWF 135

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV+   LAA+  +               +  +PR   +V+R+ R S  Q   ++
Sbjct: 136 GLGDVAKVVFLSLAALLPVAAHTC--------DGIHAVPRAYVDVARALRYSRLQLVRHV 187

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + + +   W   + +E ++V  +     GIG+ +    ++  +  +L+
Sbjct: 188 ILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLF 242

Query: 244 AMLTMLGVIFLYDQL 258
            ++ +    +  + L
Sbjct: 243 GIIVVGATGWALNAL 257



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 85/249 (34%), Gaps = 12/249 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R H P+    +     V+    I    +V    +      +       T   +   +   
Sbjct: 21  RRHAPDWRGLVLPLAAVAIWWAIASAHLVNSGLLVSPADVLRTAWTQITSGALARAL--- 77

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R      I +   + +G  +G     +  + P            + PL+      
Sbjct: 78  SASLAREARGFAIGATGGLLLGAALGLSRVATRIVGPSFDTFKQISLFAWIPLISVWFGL 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   ++LS          +  +   G  A P  + +VA +   +  +  R++ILP   
Sbjct: 138 GDVAKVVFLS----LAALLPVAAHTCDGIHAVPRAYVDVARALRYSRLQLVRHVILPAAL 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG       +W A++ +E        +  +G+G  + + +E+     V+ G++++ 
Sbjct: 194 PSIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGIIVVG 248

Query: 564 CFVLALNRF 572
               ALN  
Sbjct: 249 ATGWALNAL 257


>gi|110800299|ref|YP_694992.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens ATCC 13124]
 gi|110674946|gb|ABG83933.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens ATCC 13124]
          Length = 517

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|196032371|ref|ZP_03099785.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus W]
 gi|195995122|gb|EDX59076.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus W]
          Length = 278

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 102/245 (41%), Gaps = 15/245 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +  N   ++  +L+I ++  L+              I  + +   +      +T   +L
Sbjct: 40  DLLTNFLTIIPAILMIILLCFLIWYTTRKVSLVIFTLIGLLFILNINYWAQTMQTLALVL 99

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           ++++IS++       LA+++ R    L P LD MQ++P   +L   + +F     G V G
Sbjct: 100 TSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGV---GVVPG 156

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + IFA+               +  +P DL E + +F  +  QK + + +P +   ++
Sbjct: 157 IIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIM 211

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+      VV + ++         PG+G  +  ++ + ++     A L ++ +  
Sbjct: 212 AGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAI 264

Query: 254 LYDQL 258
           + D++
Sbjct: 265 ILDRI 269



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ----LCSNQRVSYMLDIFWFCVVC 353
           +G    +F + L  + + L R    I   F +        + +   +  +  + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLTIIPAILMIILLCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|290956061|ref|YP_003487243.1| taurine ABC transporter transmembrane protein [Streptomyces scabiei
           87.22]
 gi|260645587|emb|CBG68678.1| putative taurine transport protein (ABC superfamily, membrane)
           [Streptomyces scabiei 87.22]
          Length = 257

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + ++IA+   I  G  I   PH+        + L   P+    PL V       
Sbjct: 60  TLTGWALGLLIAATAGILTGGVIAVVPHLREATSSTIEFLRPIPSVALVPLAVLLYGSEL 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    + +L+++ + W IL   + G        +E A S+ +  W   R+++ P   PY
Sbjct: 120 RS----VLVLVVYASFWQILIQTLYGVQDVDPVAEETARSYGLGPWARVRHVLWPSALPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   A   ++ +E+       +   GLG  IA +    + PE+   V++    
Sbjct: 176 VMTGLRLAAAVALVLAVTAELV------IGAPGLGQRIAVAQTSQAVPELYALVVVTGLL 229

Query: 566 VLALN 570
            L +N
Sbjct: 230 GLLVN 234



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 92/257 (35%), Gaps = 18/257 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L  F+ +   +  L     +   P   +   +   L   +       T       ++I+
Sbjct: 12  GLTGFLALWEAVPRLGLVEDDYLPPAGRVAGALAGELADAAFWTALGDTLTGWALGLLIA 71

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                +   + A    L       ++ ++ IP +  +   V+ + +           + +
Sbjct: 72  ATAGILTGGVIAVVPHLREATSSTIEFLRPIPSVALVPLAVLLYGSELR--------SVL 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  +  W +       + ++    EE +RS+ L  W +  ++  P ++P ++  + ++
Sbjct: 124 VLVVYASFWQILIQTLYGVQDVDPVAEETARSYGLGPWARVRHVLWPSALPYVMTGLRLA 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
            +      V +E++      I  PG+G  IA+A   Q +  +   ++    +  L +   
Sbjct: 184 AAVALVLAVTAELV------IGAPGLGQRIAVAQTSQAVPELYALVVVTGLLGLLVNTGA 237

Query: 257 QLLFRPMIVWSNKFRLE 273
           + + R  + W    R E
Sbjct: 238 RAVERRALSWHQSVRGE 254


>gi|163841310|ref|YP_001625715.1| ABC transporter permease protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162954786|gb|ABY24301.1| ABC transporter permease protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 295

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 10/187 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++FR  +  +IA  + +  G+ I +   +   + P  +L     A    P+
Sbjct: 90  GQLTTHIGASLFRAAIGFVIAVALGVSAGLLISWYRPLRELLNPLLELFRNTAALALLPV 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +     +       ++++   + +L N +AG       F   A S +I G   +R 
Sbjct: 150 LTLLLGIGEESK----ITIVVYAAFFPVLLNTVAGVRTVDPLFLTAARSLNIRGVDLFRK 205

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P   TG   A   +    I +E+           GLG  I  +      P++ 
Sbjct: 206 VILPSAVPTIFTGIRMAGTSSILVLIAAEMVG------AKAGLGYLIINAQSSFLIPDMY 259

Query: 557 LGVLIMC 563
            G+L++ 
Sbjct: 260 AGILVVA 266



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 88/263 (33%), Gaps = 18/263 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYAS 66
           P  + R  + +I  +  F L            +    P   V    I L +   L  +  
Sbjct: 38  PVRVRRLAWGSIAVVGFFALWEFGPTFADPTSRVFLPPLHEVIQAGIKLTLNGQLTTHIG 97

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R     VI++        L +  R L  +L P+L++ ++           +  + +
Sbjct: 98  ASLFRAAIGFVIAVALGVSAGLLISWYRPLRELLNPLLELFRNT--------AALALLPV 149

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +   E + I  +  +  + +  +    +  +       +RS  + G   F  + +P
Sbjct: 150 LTLLLGIGEESKITIVVYAAFFPVLLNTVAGVRTVDPLFLTAARSLNIRGVDLFRKVILP 209

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +   + M+ +     ++A+EM+          G+G  I  A     +  +   +L
Sbjct: 210 SAVPTIFTGIRMAGTSSILVLIAAEMVGAKA------GLGYLIINAQSSFLIPDMYAGIL 263

Query: 247 TML---GVIFLYDQLLFRPMIVW 266
            +     +       L R    W
Sbjct: 264 VVALLGLLTNTLLIALERRFSRW 286


>gi|170741615|ref|YP_001770270.1| ABC transporter-like protein [Methylobacterium sp. 4-46]
 gi|168195889|gb|ACA17836.1| ABC transporter related [Methylobacterium sp. 4-46]
          Length = 578

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
              +  +   L    L   A  +   +       +   F+  TLA  +R    +L  +  
Sbjct: 359 LATLSALAEGLASGELVARARISLGVLAQGYAAGVGLAFLLTTLAVSTRAGRDLLTTLTA 418

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F             + IF +  + +W +  + +     +P  L
Sbjct: 419 MFNPLPAIALLPLALLWFGLGNG--------SLIFVLIHAVLWPLALNTFAGFQGVPETL 470

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L+G    W + +P ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 471 RLAGRNYGLTGLAYVWQILIPAALPAILSGLKIGWAFAWRTLIAAELVFGAAS--GRGGL 528

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +L ++ +    + ++F
Sbjct: 529 GWYIFQNRNELYTDRVFAGLLLVIAIGLAVETIVF 563



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  ++I    W +  N  AG    P   +    ++ +TG  +   I++P   P  ++G  
Sbjct: 443 LIFVLIHAVLWPLALNTFAGFQGVPETLRLAGRNYGLTGLAYVWQILIPAALPAILSGLK 502

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+L++    LA+  
Sbjct: 503 IGWAFAWRTLIAAELVFGAAS--GRGGLGWYIFQNRNELYTDRVFAGLLLVIAIGLAVET 560

Query: 572 FLWHPLYLYGTRC 584
            ++  +    TR 
Sbjct: 561 IVFATVERATTRR 573


>gi|84685716|ref|ZP_01013613.1| hypothetical protein 1099457000253_RB2654_07084 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666382|gb|EAQ12855.1| hypothetical protein RB2654_07084 [Rhodobacterales bacterium
           HTCC2654]
          Length = 275

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 95/235 (40%), Gaps = 19/235 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  +V+G+    + G+    VP  +  +         L      T   + +A VI+L  +
Sbjct: 52  AVAVVLGLAAWRMIGL----VPGIVTALALAACYAMGLWAETMETLALVFAASVIALAIS 107

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA    RL   L+P LD++Q++P   +L   +                 A+ A  
Sbjct: 108 LPVGILAGLFPRLDRALMPTLDLIQTMPPYIYLLPAIALLGYG--------PATALAATV 159

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +          +   P +  E+ ++  ++  Q F+ + +PF++P ++  +  S+   
Sbjct: 160 IVAMPPAIRLTSLGIRETPHEFIELGQASGVTTRQMFFKIRLPFAVPSIMAGINQSLMMA 219

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +  VV + ++  G       G+G  I  AI+  D+   + A + ++ +  + D++
Sbjct: 220 FGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINASIAIVVLTMVLDRI 267



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V + L    F  V  V    AW+ IG +    T   +     +G       T+  V    
Sbjct: 41  VLWALISAPFYAVAVVLGLAAWRMIGLVPGIVTALALAACYAMGLWAETMETLALVFAAS 100

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA  I +PVGI  G  P +   + P   L+   P  ++    ++ + Y          +
Sbjct: 101 VIALAISLPVGILAGLFPRLDRALMPTLDLIQTMPPYIYLLPAIALLGYGPATALAATVI 160

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P++F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 161 V----AMPPAIRLTSLGIRETPHEFIELGQASGVTTRQMFFKIRLPFAVPSIMAGINQSL 216

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         +   + +    + L+R 
Sbjct: 217 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINASIAIVVLTMVLDRI 267


>gi|42519465|ref|NP_965395.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583753|gb|AAS09361.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329667013|gb|AEB92961.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 515

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 20/187 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+++     A +    ++     + I  I+Q+IP L  L   + +          
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+ A+    +  +  + Y  L  IP +LEE + +F L+ W+K   L +P +MP +
Sbjct: 82  --TVPAVIALVLYAIMPIFQNTYSGLTEIPENLEEAATAFGLTKWKKLQRLEIPMAMPMI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
           V  + +++      ++ +  +        L    +YI + I   +     + AIL A+L 
Sbjct: 140 VAGIRIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLA 192

Query: 248 MLGVIFL 254
           ++    L
Sbjct: 193 LIFSGVL 199



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+   +      +      A ++   P+     L++  V    +   +
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  +G +  P + +E A++F +T W+  + + +P   P  V G 
Sbjct: 88  ALVLYAIM----PIFQNTYSGLTEIPENLEEAATAFGLTKWKKLQRLEIPMAMPMIVAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A        I +   +             YI       +  EV++G ++     L  +
Sbjct: 144 RIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLALIFS 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|310817058|ref|YP_003965022.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308755793|gb|ADO43722.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 263

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 10/197 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   +    +A ++ +P+G+ +G    +   ++ +   LAA P   F PL++  +    
Sbjct: 72  SLQVFLGGYGLAILVAVPLGLVMGSLKLLGKTLEVYLYALAATPRVAFIPLIIVFLGLG- 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  G    I+ N   G      +  E+A S      R +  I+LPG  PY
Sbjct: 131 ---LEAKITVVFMGAVMPIVMNTYTGVQQVDRELIEMARSVGAKRRRIYWRIVLPGSLPY 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G           ++V+E+      +    GLG  +A         E  + VL +   
Sbjct: 188 LIAGLRIGATIGLINTVVAEL------YTSVRGLGGLLATYGNSFRMAEYFVVVLSLALI 241

Query: 566 VLALNRFLWHPLYLYGT 582
            + +   L H       
Sbjct: 242 GVVVTEILRHIEIRLAR 258



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P    D     ++   L      +    L    +++L       +    + LG  L  
Sbjct: 47  PSPLQTYDAFWRLIENGRLLTALGDSLQVFLGGYGLAILVAVPLGLVMGSLKLLGKTLEV 106

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  + + P + F+   +V+              A I  +F   V  +  + Y  +  + 
Sbjct: 107 YLYALAATPRVAFIPLIIVFLGLGL--------EAKITVVFMGAVMPIVMNTYTGVQQVD 158

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R+L E++RS      + +W + +P S+P L+  + +  + G    V +E+         +
Sbjct: 159 RELIEMARSVGAKRRRIYWRIVLPGSLPYLIAGLRIGATIGLINTVVAELYT------SV 212

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  +A       +      +L++  +  +  ++L
Sbjct: 213 RGLGGLLATYGNSFRMAEYFVVVLSLALIGVVVTEIL 249


>gi|293605708|ref|ZP_06688085.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815887|gb|EFF74991.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 251

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 100/252 (39%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+ F  +  +L  +L+  +    L       VP  +V+ +   L   S  Q    T  R
Sbjct: 4   ARKHFAGVLGVLFILLLWQLAAFALPDFLMPGVP-AVVERLFEDLGKQSFHQSLMGTLGR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++         +
Sbjct: 63  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPII 122

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   L+A F            S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 123 VVVALSAFFPA--------ALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPE 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 175 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 229

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 230 AALIDQFVLENL 241



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 87/243 (35%), Gaps = 22/243 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-------------TMFRVVVLI 394
           +  V+  + I + WQ   + +  F    V  V+                  T+ R+    
Sbjct: 8   FAGVLGVLFILLLWQLAAFALPDFLMPGVPAVVERLFEDLGKQSFHQSLMGTLGRLGAGY 67

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A    I  G+           ++    +L + P+  + PL +  + +     N  + +
Sbjct: 68  GLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTPIIV 123

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++     +    +V+    +        A     T W   + + LP + P  +TGA  A 
Sbjct: 124 VVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAF 183

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           G AW A I +E+           GLG  +A S E      V+  +L++      +++F+ 
Sbjct: 184 GNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVL 238

Query: 575 HPL 577
             L
Sbjct: 239 ENL 241


>gi|316933795|ref|YP_004108777.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315601509|gb|ADU44044.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 342

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 89/281 (31%), Gaps = 11/281 (3%)

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
           L    + +   +         + +      +    G       E+  +      +  ++ 
Sbjct: 47  LSCLWREDIGDWTRTKEVAIAAFVFGGAIAIAAVAGFWSQRVGESLQRRSPWLLLLGVVL 106

Query: 346 IFWFCVVCGVAIGIAWQSIGY-IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             W  +   + +           +      D + +      ++   +   +I + +    
Sbjct: 107 ALWEVLTAKLGVLPLPFFPPPQAIVEVYTDDFVKLFDSVFASVKLQLGGYLIGAAVGFVT 166

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG+   +   + P  + +   PA  + P+          +     + L+   T + +
Sbjct: 167 GVSIGWSRAVGYWVHPVLRFIGPLPATAWLPIAFFAFP----SSWSASTFLIALATGFPV 222

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                +G ++  N + +VA +           + +P   P+   G     G ++   +V+
Sbjct: 223 TVLTWSGVASVSNAYYDVARTLGARPSFLVFKVAIPAALPHVFVGLFMGLGASFAVLVVA 282

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           E+          +GLG Y+  +    ++  +   +L+M   
Sbjct: 283 EMMG------VKSGLGWYLQWAQGWAAYANMYAALLVMSLL 317



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +    L   +I     FV       SR +G  + P+L  +  +P   +L
Sbjct: 137 DFVKLFDSVFASVKLQLGGYLIGAAVGFVTGVSIGWSRAVGYWVHPVLRFIGPLPATAWL 196

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  + ++     +V+R+     
Sbjct: 197 PIAFFAF--------PSSWSASTFLIALATGFPVTVLTWSGVASVSNAYYDVARTLGARP 248

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P ++P +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 249 SFLVFKVAIPAALPHVFVGLFMGLGASFAVLVVAEMMGVKS------GLGWYLQWAQGWA 302

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
               +  A+L M  +       LF+    ++VW 
Sbjct: 303 AYANMYAALLVMSLLCSGAITALFKVRDRLLVWQ 336


>gi|332529151|ref|ZP_08405115.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332041374|gb|EGI77736.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 292

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 10/161 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               + +    Q+L   PA    PLV+                L+     + I  N   G
Sbjct: 126 RWAETLLDSSFQMLRNIPALALIPLVILWFGI----DESAKLFLIAISVFFPIYLNTFHG 181

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +      E+  ++ +  W+ +R IILPG     + G   + G  W   IV+E  S   
Sbjct: 182 IRSVDPGLIEMGRTYGLNRWQLYRQIILPGALSSILVGLRFSLGLMWVILIVAETIS--- 238

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +G+G     + E      V++G+L+        +  
Sbjct: 239 ---AQSGIGYLTMNAREFLQTDIVLVGILLYALLGKLADVL 276



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLL 81
           +A + V  + ++              V +    L     L  +   +  R L  + I   
Sbjct: 54  IALIAVWQLASVRGWLSTRVLPAPADVAVAAWNLTASGELWTHVKVSAGRALLGLAIGGG 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   L    R    +L     ++++IP L  +   +++F           E A +F 
Sbjct: 114 LGLVLGLLTGTLRWAETLLDSSFQMLRNIPALALIPLVILWFGID--------ESAKLFL 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  + +  + +  + ++   L E+ R++ L+ WQ +  + +P ++  ++  +  S+ 
Sbjct: 166 IAISVFFPIYLNTFHGIRSVDPGLIEMGRTYGLNRWQLYRQIILPGALSSILVGLRFSLG 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             W  ++ +E I          GIG     A +      +L  +L    +  L D L
Sbjct: 226 LMWVILIVAETIS------AQSGIGYLTMNAREFLQTDIVLVGILLYALLGKLADVL 276


>gi|299067396|emb|CBJ38595.1| alkanesulfonate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 264

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+            L  + + +T R L    I          L    R    +L 
Sbjct: 43  LPAPLDVARAAIELARSGELWTHVAVSTWRALLGFAIGGALGLALGLLTGTFRTAETLLD 102

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             L ++++IP+L  +   +++F           E A +F +     + +  + Y  +  +
Sbjct: 103 TTLQMIRNIPVLALIPLVILWFGID--------ESAKLFLVSLGVFFPIYLNTYHGIRAV 154

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E++RS+ LS  + +  + +P ++P ++  +  S+   W  ++ +E +        
Sbjct: 155 DPALVEMARSYGLSRARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVS------A 208

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             GIG     A +      +L  +L    +  L D L   L R  + W   ++
Sbjct: 209 QAGIGYMTMNAREFLQTDVVLLGILLYALLGKLADLLSRALERFWLRWHPGYQ 261



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 10/172 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++ +R ++   I   + + +G+  G      + +    Q++   P     PLV+     
Sbjct: 67  AVSTWRALLGFAIGGALGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGI 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L+  G  + I  N   G  A      E+A S+ ++  R +R +ILPG  
Sbjct: 127 ----DESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSRARLYREVILPGAL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           P  + G   + G  W   IV+E  S         G+G     + E      V
Sbjct: 183 PQILVGVRFSLGLMWVTLIVAETVS------AQAGIGYMTMNAREFLQTDVV 228


>gi|298250202|ref|ZP_06974006.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548206|gb|EFH82073.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 272

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 91/239 (38%), Gaps = 15/239 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              +L   II IL +        P  +   +   +      Q A  +  R+     ISL+
Sbjct: 33  ALLLLAWHIIAILNIWPSYSLPGPLAVFASLVDGISSGQYIQGALVSVQRLALGYAISLV 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L  + R L   +  ++  +Q++P + +L   +++F          +E A  F 
Sbjct: 93  LGVALGALIGRFRLLEETVGSLILGLQALPSVCWLPLAILWFGL--------SEQAITFV 144

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++++T  +   + N P      +R+    G      + +P ++P ++  +    +
Sbjct: 145 VVMGALFSITLGVVNGIKNTPPLYVRAARTLGTHGIPLATQVILPAALPSIIEGLKQGWT 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E+I           +G+ +       D   ++  ML ++ +    D L+F
Sbjct: 205 FAWRSLMAAELI------YGTLSLGNLLNDGRNFDDAAQVIAIMLIIIVIGVAIDTLIF 257



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 13/262 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWL 382
           H     +     + V Y L +  + ++  + I  ++   G +    +  D       I  
Sbjct: 16  HPAYAAIGPWLRRLVFYALLLLAWHIIAILNIWPSYSLPGPLAVFASLVDGISSGQYIQG 75

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +++ R+ +   I+ ++ + +G  IG    +   +      L A P+  + PL +    
Sbjct: 76  ALVSVQRLALGYAISLVLGVALGALIGRFRLLEETVGSLILGLQALPSVCWLPLAILWFG 135

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                    ++ +++ G  + I   V+ G    P  +   A +    G      +ILP  
Sbjct: 136 LS----EQAITFVVVMGALFSITLGVVNGIKNTPPLYVRAARTLGTHGIPLATQVILPAA 191

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G       AW + + +E+         T  LG  + +        +V+  +LI+
Sbjct: 192 LPSIIEGLKQGWTFAWRSLMAAELI------YGTLSLGNLLNDGRNFDDAAQVIAIMLII 245

Query: 563 CCFVLALNRFLWHPLYLYGTRC 584
               +A++  ++  +       
Sbjct: 246 IVIGVAIDTLIFANIERGIRER 267


>gi|107026694|ref|YP_624205.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116692116|ref|YP_837649.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105896068|gb|ABF79232.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116650116|gb|ABK10756.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 271

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 18/254 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLP 62
           P    RR+    +      L        L             P D++          +L 
Sbjct: 12  PATADRRLHAPDWRGFVLPLAALACWWALASAHLVKSGLFVSPADVLHTAWAQATSGALG 71

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  S +  R      I      +   +   SR    ++ P  D  + I +  ++    V+
Sbjct: 72  RALSASLAREACGFAIGATGGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVW 131

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV+   LAA+  +               +  +PR   +V+R+ R S  Q   Y
Sbjct: 132 FGLGDVAKVVFLSLAALLPVAAHTC--------DGIHAVPRTYVDVARALRYSRLQLIRY 183

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + + +   W   + +E ++V  +     GIG+ +    ++  +  +L
Sbjct: 184 VILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVL 238

Query: 243 YAMLTMLGVIFLYD 256
           + ++ +    +  +
Sbjct: 239 FGIIVVGVTGWALN 252



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 9/186 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R      I +   + +G  +G     +  + P            + PL+       
Sbjct: 76  ASLAREACGFAIGATGGLLLGAVLGLSRVAARMVGPSFDTFKQISLFAWIPLISVWFGLG 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   ++LS          +  +   G  A P  + +VA +   +  +  RY+ILP   P
Sbjct: 136 DVAKVVFLS----LAALLPVAAHTCDGIHAVPRTYVDVARALRYSRLQLIRYVILPAALP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       +W A++ +E        +  +G+G  + + +E+     V+ G++++  
Sbjct: 192 SIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGIIVVGV 246

Query: 565 FVLALN 570
              ALN
Sbjct: 247 TGWALN 252


>gi|314981894|gb|EFT25987.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA3]
          Length = 288

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDTETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L  + V    D++
Sbjct: 258 GLAGVIVAVYLDRI 271



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +S  L +    V   +    A W+   + +  F     +        T+  VVV +I+A 
Sbjct: 49  LSKPLYLVMMAVFAAIGWACANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILAL 108

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ IP+GIW       S+ I+P    +   P+  +   V+       +   +   +  + 
Sbjct: 109 ILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALP 168

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               +       G      +  E  ++F  +       I +P   P  + G       A 
Sbjct: 169 PGVRF----TELGIRGVDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLAL 224

Query: 519 NASIVS 524
           +  ++S
Sbjct: 225 SMVVLS 230


>gi|258423372|ref|ZP_05686263.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Staphylococcus aureus A9635]
 gi|257846433|gb|EEV70456.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Staphylococcus aureus A9635]
          Length = 504

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|92112317|ref|YP_572245.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91795407|gb|ABE57546.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 253

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 14/250 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--T 386
               +   +      L   W   +    +      +   +    + +VL  IWL  +  +
Sbjct: 5   ARHRRTLISAVSLTALVAAWEAALRVGWLPSNLVPLPSQIPGVLWAEVLDGIWLDVVLSS 64

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +    + + I S++ I VG+     P   +     A+LL   P   + P  +        
Sbjct: 65  LSHYSIGLGIGSVLGIAVGMAAALLPRFDAAHSWLARLLRPIPPLAWIPFAIIWFGVTET 124

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPY 505
                 + ++  G  W   F   +   A  + + EVA +F   G+      I LP   P 
Sbjct: 125 ----AAAFIISIGVFWINYFTSYSAVRAIDDGYYEVARAFGQGGFGARLAKISLPAAAPG 180

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G     G  W   + +E+           G+G  + E++   +   VV+ +L +   
Sbjct: 181 ILGGLRAGLGQGWMTVVAAELFGI-------PGIGQRMMEASGLLATDVVVVYMLTIAAL 233

Query: 566 VLALNRFLWH 575
               +     
Sbjct: 234 YALFDFLFMR 243



 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 17/252 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTL 70
            RR   +   L A V        +         +P  I  ++   +           +  
Sbjct: 7   HRRTLISAVSLTALVAAWEAALRVGWLPSNLVPLPSQIPGVLWAEVLDGIWLDVVLSSLS 66

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
                + I  +        AA   R       +  +++ IP L ++ F +++F       
Sbjct: 67  HYSIGLGIGSVLGIAVGMAAALLPRFDAAHSWLARLLRPIPPLAWIPFAIIWFGV----- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ-KFWYLGVPFSM 189
               E AA F I     W   F+ Y ++  I     EV+R+F   G+  +   + +P + 
Sbjct: 122 ---TETAAAFIISIGVFWINYFTSYSAVRAIDDGYYEVARAFGQGGFGARLAKISLPAAA 178

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++  +   +  GW  VVA+E+         +PGIG  +  A        ++  MLT+ 
Sbjct: 179 PGILGGLRAGLGQGWMTVVAAELF-------GIPGIGQRMMEASGLLATDVVVVYMLTIA 231

Query: 250 GVIFLYDQLLFR 261
            +  L+D L  R
Sbjct: 232 ALYALFDFLFMR 243


>gi|168216378|ref|ZP_02642003.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens NCTC 8239]
 gi|182381449|gb|EDT78928.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens NCTC 8239]
          Length = 517

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|325479517|gb|EGC82613.1| ABC transporter, substrate-binding protein, QAT family
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 505

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 79/187 (42%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++++++      A L ++ +R+   ++ +  + Q+IP L  L   + +          
Sbjct: 27  LISLILAIFIAVPLAILLSEKKRVNEGVLQVTGVFQTIPSLALLGLFIPFMGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             ++ AI A+    ++ +          I   LEE + +F ++ W+K     +  +MP +
Sbjct: 81  --KIPAITALVIYAIFPIYQGAVTGFSEIDPSLEEAATAFGMTKWEKLRKYRLSLAMPII 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S       ++ +  +     ++   G+GS+I L I   +   IL   ++   + 
Sbjct: 139 MSGVRTSA----IMIIGTATLAA---LVGAGGLGSFILLGIDRNNSSLILIGAISSALLA 191

Query: 253 FLYDQLL 259
            L+  L+
Sbjct: 192 ILFGGLI 198



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+A  I +P+ I +  +  ++  +     +    P+     L +  +        +
Sbjct: 27  LISLILAIFIAVPLAILLSEKKRVNEGVLQVTGVFQTIPSLALLGLFIPFMGIG----KI 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                ++    + I    + G S      +E A++F +T W   R   L    P  ++G 
Sbjct: 83  PAITALVIYAIFPIYQGAVTGFSEIDPSLEEAATAFGMTKWEKLRKYRLSLAMPIIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G +      +   
Sbjct: 143 RTSAIMIIGTATLAALVGAG-------GLGSFILLGIDRNNSSLILIGAISSALLAILFG 195

Query: 571 RFL 573
             +
Sbjct: 196 GLI 198


>gi|325000534|ref|ZP_08121646.1| binding-protein-dependent transport systems inner membrane
           component [Pseudonocardia sp. P1]
          Length = 258

 Score = 97.7 bits (242), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 15/191 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T   +L A +I++         AA+SR    VL P+LD MQ+IP   +L   V
Sbjct: 83  LWTETMETFGLVLVAALIAVAIGVPLGIWAARSRAASRVLRPVLDTMQTIPAFVYLIPVV 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F     G V G     +F+I  +            +  +  ++ E + +F     Q  
Sbjct: 143 LLFG---IGVVPGIVATIVFSIAPA-----VRLTELGIRGVDSEVVEAAHAFGAHPRQIL 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  +   +      VV + +           G+G+ +  A+ + D+ +
Sbjct: 195 REVQLPMALPSIMAGVNQVIMLALSMVVVAGLA-------GADGLGTVVVSAVTQLDIAS 247

Query: 241 ILYAMLTMLGV 251
            +   L ++ V
Sbjct: 248 GIEGGLAVVIV 258



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 11/180 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   V+V  +IA  I +P+GIW       S  ++P    +   PA V+   VV       
Sbjct: 90  TFGLVLVAALIAVAIGVPLGIWAARSRAASRVLRPVLDTMQTIPAFVYLIPVVLLFGIGV 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I             G     ++  E A +F     +  R + LP   P 
Sbjct: 150 VPGIVATIVFSIAPAVRL----TELGIRGVDSEVVEAAHAFGAHPRQILREVQLPMALPS 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A +  +V+ +A          GLG  +  +  +      + G L +   
Sbjct: 206 IMAGVNQVIMLALSMVVVAGLAG-------ADGLGTVVVSAVTQLDIASGIEGGLAVVIV 258


>gi|307729582|ref|YP_003906806.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307584117|gb|ADN57515.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 274

 Score = 97.7 bits (242), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            ++  + +     +     IT+   V+     + I + VG+W+   P  S+   P+ +  
Sbjct: 57  VLLRIWEWFTSGEIYLHLWITLLETVLAFAFGTAIGLGVGLWLALSPLASALFDPYIKAA 116

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            + P  +  P+          +       L+ F     + FNV  G           A  
Sbjct: 117 NSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARM 172

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
               G +  R++ LP    +  +   T+ G A+  S+V E            G+G  I +
Sbjct: 173 LGANGKQLLRHVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQ 226

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        V  G+L++  F L L+  +
Sbjct: 227 AEGTFDINTVFAGILVLTAFALILDALV 254



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L  + A               A S     +  P +    S+P +       V+F
Sbjct: 73  HLWITLLETVLAFAFGTAIGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWF 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV        F +F        F++YQ +  +   +   +R    +G Q   ++
Sbjct: 133 GLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANGKQLLRHV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 185 YLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDINTVFA 238

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +L +     + D L+    R ++ W  K
Sbjct: 239 GILVLTAFALILDALVGMGERHLMKWQPK 267


>gi|220930693|ref|YP_002507602.1| substrate-binding region of ABC-type glycine betaine transporter
           [Clostridium cellulolyticum H10]
 gi|220001021|gb|ACL77622.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium cellulolyticum H10]
          Length = 524

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 75/188 (39%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            + A+  +++       L +  ++L   ++   +++Q+IP +  L F++ +         
Sbjct: 25  TVIAVGFAIILGVPLGILISYVKKLNKPVLGFANVVQAIPSMALLGFSIPFLGIG----- 79

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L A+  +    +  +  + +  + NI     E +R   L+ +Q    + +P ++P 
Sbjct: 80  ---TLPAVVMVILYSLLPIIKNTFTGIQNINPLTLEAARGIGLTKFQILTKVQIPLALPV 136

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       V A  ++ +    I   G+G  +   I+  +   IL   +    +
Sbjct: 137 IMAGVRIS------AVTAVGLMTIAAF-IGAGGLGFLVFSGIRTVNNNQILAGAIPACLL 189

Query: 252 IFLYDQLL 259
               D L+
Sbjct: 190 ALTVDYLV 197



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ +  A I+ +P+GI I +   ++  +  FA ++ A P+       +  +    L    
Sbjct: 26  VIAVGFAIILGVPLGILISYVKKLNKPVLGFANVVQAIPSMALLGFSIPFLGIGTL---- 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++I  +   I+ N   G         E A    +T ++    + +P   P  + G 
Sbjct: 82  PAVVMVILYSLLPIIKNTFTGIQNINPLTLEAARGIGLTKFQILTKVQIPLALPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++     G       GLG  +       +  +++ G +  C   L ++
Sbjct: 142 RISAVTAVGLMTIAAFIGAG-------GLGFLVFSGIRTVNNNQILAGAIPACLLALTVD 194

Query: 571 RFL 573
             +
Sbjct: 195 YLV 197


>gi|71905722|ref|YP_283309.1| binding-protein dependent transport system inner membrane protein
           [Dechloromonas aromatica RCB]
 gi|71845343|gb|AAZ44839.1| Binding-protein-dependent transport systems inner membrane
           component [Dechloromonas aromatica RCB]
          Length = 318

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+SI+ +P+GI  G    +    +PF +     PA  F  L V+ +  Y 
Sbjct: 124 SIQIIFWGFVISSIVGVPLGILAGTYASLGRLSEPFIEFFRYLPAPAFGALAVAVLGIYD 183

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +    GWR    +++PGI P 
Sbjct: 184 G----PKIAIIVIGTFFQQVLIIANTTRKLEATLIEAARTLGSRGWRLIARVVVPGILPN 239

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                    G AW   IV+E+         ++G+  YI +      F  V   
Sbjct: 240 LYQDQRILLGWAWTYLIVAELIG------TSSGITWYITQQARYQHFDNVYAA 286



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
              P   +   L +    +   +    VIS +       LA     LG +  P ++  + 
Sbjct: 106 TSPPEQKNAPWLHESLWHSIQIIFWGFVISSIVGVPLGILAGTYASLGRLSEPFIEFFRY 165

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P   F    V         K        I  I     +     +  +   +   L E +
Sbjct: 166 LPAPAFGALAVAVLGIYDGPK--------IAIIVIGTFFQQVLIIANTTRKLEATLIEAA 217

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R+    GW+    + VP  +P L  +  + +   W +++ +E+I          GI  YI
Sbjct: 218 RTLGSRGWRLIARVVVPGILPNLYQDQRILLGWAWTYLIVAELIGTSS------GITWYI 271

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               + Q    +  A++ +  + F  D LL R
Sbjct: 272 TQQARYQHFDNVYAAIIIIGIIGFGSDLLLAR 303


>gi|27375522|ref|NP_767051.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27348659|dbj|BAC45676.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 291

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+                 G+ +G    +S+  QPF   + + P     P++V     
Sbjct: 95  AVTLKNTFFGFATGVSSGFAAGLVLGRSDRLSAIFQPFITAVNSIPRIALAPIIVLAFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  +   ++++F     + FN   GA +    F   A     + W+  R +++P   
Sbjct: 155 GDTSKVVTSWIVVVF----LVFFNTFEGARSIDEGFVNAARLLGASEWQITRTVVIPSTM 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +       A   A    IV E            G+G  I ES  +     +++ V+++ 
Sbjct: 211 AWVFASLTPAISFALIGVIVGEFIG------AERGIGRLIIESEARAEASGMMVAVIVLM 264

Query: 564 CFVLALNRFLWH 575
              +AL+  +W 
Sbjct: 265 LVGVALSALIWR 276



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
             ++L    + T           +   F    +  +S RL  +  P +  + SIP +   
Sbjct: 86  SENNLWIATAVTLKNTFFGFATGVSSGFAAGLVLGRSDRLSAIFQPFITAVNSIPRIALA 145

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V+ F      KV+ + +  +F +F        F+ ++   +I       +R    S 
Sbjct: 146 PIIVLAFGIGDTSKVVTSWIVVVFLVF--------FNTFEGARSIDEGFVNAARLLGASE 197

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ    + +P +M  +  ++  ++S     V+  E I          GIG  I  +    
Sbjct: 198 WQITRTVVIPSTMAWVFASLTPAISFALIGVIVGEFIG------AERGIGRLIIESEARA 251

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSN 268
           +   ++ A++ ++ V      L++R    ++ W  
Sbjct: 252 EASGMMVAVIVLMLVGVALSALIWRLQAYLLRWQQ 286


>gi|300309401|ref|YP_003773493.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300072186|gb|ADJ61585.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 288

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 90/248 (36%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   LV   +    +                  L    L      +   +L A V+ ++
Sbjct: 45  LLLLALVWEGVARWQNNDLLLPSFLQTAQAFIDGLRSGELFGKTWLSLQVLLKAYVLGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F             + IF 
Sbjct: 105 AAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIALLPIALLWFGLGQG--------SLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +   L    R++ L G      + VP ++P ++  + +  +
Sbjct: 157 LVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQVLVPAALPSILAGLRIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F 
Sbjct: 217 FAWRTLIAAELVFGATS--GKGGLGWYIFQNRNELYTDKVFAGLAMVILIGLLVENLVFN 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 TLERVTVK 282



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 86/266 (32%), Gaps = 15/266 (5%)

Query: 325 FHFPENFLQLCSNQRVSYML--DIFWFCVVCG----VAIGIAWQSIGYIVNHFTYQDVLY 378
           F  P+   Q    ++ + +L   + W  V       + +    Q+    ++     ++  
Sbjct: 27  FSLPQRLWQQGWVRKGAILLLLALVWEGVARWQNNDLLLPSFLQTAQAFIDGLRSGELFG 86

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
             WL    + +     ++  +    +             +     +    PA    P+ +
Sbjct: 87  KTWLSLQVLLK---AYVLGIVAAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIALLPIAL 143

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    L  +++    W +  N  AG     +  +    ++ + G  +   ++
Sbjct: 144 LWFGLGQGS----LIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQVL 199

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G       AW   I +E+           GLG YI ++  +    +V  G
Sbjct: 200 VPAALPSILAGLRIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTDKVFAG 257

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRC 584
           + ++    L +   +++ L     + 
Sbjct: 258 LAMVILIGLLVENLVFNTLERVTVKK 283


>gi|152964408|ref|YP_001360192.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151358925|gb|ABS01928.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 239

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 14/202 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +   P D+            L    + +  R+L       +   V   L   SR L  +
Sbjct: 22  SQLPPPADVWHAAQQLWSNGQLQTNIAISVQRVLIGFACGAVAGLVLGGLTGASRLLHDL 81

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P L   +++P L ++    ++     P K++   + A F ++T+        +  +L 
Sbjct: 82  LAPTLGAFRAVPSLAWVPLLGLWIGIGEPPKIVLVAIGAFFPVYTT--------VASALS 133

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++   L EV R++   G   F  + +P + P L+  + + ++  W F+VA+E++      
Sbjct: 134 HLDPALVEVGRAYGRRGIGLFTEVLLPATAPALLSGLRLGLAQSWLFLVAAELLSSSI-- 191

Query: 220 IPLPGIGSYIALAIKEQDLLAI 241
               G+G  +           +
Sbjct: 192 ----GLGYQMINGQNTSRTDQV 209



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 66/213 (30%), Gaps = 10/213 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++  +W                              +     I++ RV++     ++  +
Sbjct: 7   LVAWWWSTAAGVFDRSQLPPPADVWHAAQQLWSNGQLQTNIAISVQRVLIGFACGAVAGL 66

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G   G    +   + P      A P+  + PL+   +            +L+  G  +
Sbjct: 67  VLGGLTGASRLLHDLLAPTLGAFRAVPSLAWVPLLGLWIGIG----EPPKIVLVAIGAFF 122

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   V +  S       EV  ++   G   +  ++LP   P  ++G       +W   +
Sbjct: 123 PVYTTVASALSHLDPALVEVGRAYGRRGIGLFTEVLLPATAPALLSGLRLGLAQSWLFLV 182

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +E+ S       + GLG  +          +V
Sbjct: 183 AAELLS------SSIGLGYQMINGQNTSRTDQV 209


>gi|110803807|ref|YP_697850.1| glycine betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein [Clostridium
           perfringens SM101]
 gi|110684308|gb|ABG87678.1| glycine betaine/carnitine/choline ABC transporter,
           permease/substrate-binding protein [Clostridium
           perfringens SM101]
          Length = 517

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|110633171|ref|YP_673379.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110284155|gb|ABG62214.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 270

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 15/207 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     T    V+   I S++   +G  +G        + P+   L   P   F PL +
Sbjct: 69  LIPNILSTALYTVLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPKVAFAPLFI 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               Y +  P L +++L++F   + +L NV+A       D   +A +++++ W+ +  + 
Sbjct: 129 MWFGY-NATPKLLVTVLIVF---FPVLVNVLAAMKTVDRDMVNLARAYNLSRWQIFLKVQ 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P  + G   +   A     V E+          TGLG  IA    + +   V   
Sbjct: 185 FPSTLPNLLAGLRISSTLAVIGVTVGELVGG------NTGLGFLIAYGGGQANAAMVFNA 238

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           ++++    +AL   L      +    L
Sbjct: 239 IILLTIIGIALYSVL-----AWAEERL 260



 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 95/263 (36%), Gaps = 20/263 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYA 65
            P  +   +   +  L A +L+   +   L   +       D+   +       +L    
Sbjct: 14  RPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGELGRMYRRENLIPNI 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T L  +    I  +   +   L   SR    VL P +  +Q  P + F    +++F  
Sbjct: 74  LSTALYTVLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPKVAFAPLFIMWFGY 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K++   L   F +          ++  ++  + RD+  ++R++ LS WQ F  +  
Sbjct: 134 NATPKLLVTVLIVFFPVLV--------NVLAAMKTVDRDMVNLARAYNLSRWQIFLKVQF 185

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P L+  + +S +     V   E++          G+G  IA    + +   +  A+
Sbjct: 186 PSTLPNLLAGLRISSTLAVIGVTVGELVGGNT------GLGFLIAYGGGQANAAMVFNAI 239

Query: 246 LTMLGVIFLYDQLLFRPMIVWSN 268
           + +  +      +L      W+ 
Sbjct: 240 ILLTIIGIALYSVL-----AWAE 257


>gi|302868207|ref|YP_003836844.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|315505397|ref|YP_004084284.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|302571066|gb|ADL47268.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|315412016|gb|ADU10133.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 286

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 91/281 (32%), Gaps = 15/281 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P               R        QL     V  ++ + W   V  + +      +  
Sbjct: 9   EPAQPPAPSARPAKPARRKFDLREKPQLWLVPTVFVVVVLAWEYGVQLIGVDEYVLPLPS 68

Query: 367 IVNHFTYQDVLYVIWLGC--ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            V    +Q +    + G   +T    ++  +I     + +G +I     + + + P+   
Sbjct: 69  SVVESLWQQLGDDQFWGHFWVTTQEALLGFVIGVGAALVLGTFISQIKIVEATLMPYIVA 128

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P     PL V    +   +  +  +++    + + +L NVI G  A   D  ++ +
Sbjct: 129 FQTVPKVALAPLFVVWFGFGLTSKVVMAAVI----SFFPMLVNVIEGLRAADADKIQMLT 184

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            F  +  + +R + LP   P+   G       A   ++V E            GLG  + 
Sbjct: 185 VFGASKTQIFRMVRLPSALPFIFAGLDIGIVFAILGAVVGEFIG------AKEGLGYLLL 238

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLA---LNRFLWHPLYLYGT 582
           ++        +   ++++    L    + R L   L  +  
Sbjct: 239 QTNYNFDIAGMFAVLVVLSVMGLVAHFVIRLLQKRLAFWAE 279



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
             +P  +V+ +   L       +   TT   L   VI +    V  T  ++ + +   L+
Sbjct: 64  LPLPSSVVESLWQQLGDDQFWGHFWVTTQEALLGFVIGVGAALVLGTFISQIKIVEATLM 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +      VV+F      KV+ A + + F         M  ++ + L   
Sbjct: 124 PYIVAFQTVPKVALAPLFVVWFGFGLTSKVVMAAVISFF--------PMLVNVIEGLRAA 175

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++   F  S  Q F  + +P ++P +   + + +       V  E I   +    
Sbjct: 176 DADKIQMLTVFGASKTQIFRMVRLPSALPFIFAGLDIGIVFAILGAVVGEFIGAKE---- 231

Query: 222 LPGIGSYIALAIKEQDLL---AILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
             G+G  +       D+    A+L  +  M  V     +LL + +  W+ 
Sbjct: 232 --GLGYLLLQTNYNFDIAGMFAVLVVLSVMGLVAHFVIRLLQKRLAFWAE 279


>gi|222102207|ref|YP_002546797.1| ABC transporter, permease protein [Agrobacterium radiobacter K84]
 gi|221728324|gb|ACM31333.1| ABC transporter, permease protein [Agrobacterium radiobacter K84]
          Length = 265

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 10/253 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           I     +  L L S   +  +L   W+ +  G            +   +T      ++  
Sbjct: 4   ILLSILDWVLSLLSQLWLPVLLICGWWWISEGSQSYYFPPLSEILSALWTDLIAGPLLGY 63

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
            CI++  +   + IA+++ I  G+ IG    +    QP      A P     P+V+  + 
Sbjct: 64  VCISLSNLAAGLAIATMLGISFGLLIGEFDTMRQITQPTLNFFRAVPPASIVPIVIIALG 123

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                       ++  G  W IL N I G        ++ A ++ I        + LP  
Sbjct: 124 VGATPK----IFIIALGCFWPILLNTIDGVRGTSLAVRDTARAYRIPTHLVVFRVALPAA 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G   A   A    ++SE            G+G YI E++ + +  +   G +++
Sbjct: 180 MPQIMAGIRVALAVALVLMVISEFFG------ADAGVGFYITEASTRFATRQAWAGTILV 233

Query: 563 CCFVLALNRFLWH 575
                 L+     
Sbjct: 234 GIIGYLLSGVFLQ 246



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 87/246 (35%), Gaps = 19/246 (7%)

Query: 26  VLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           VL+I     +  G Q    P   +I+  +   L    L  Y   +   + + + I+ +  
Sbjct: 23  VLLICGWWWISEGSQSYYFPPLSEILSALWTDLIAGPLLGYVCISLSNLAAGLAIATMLG 82

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
             +  L  +   +  +  P L+  +++P    +   ++        K        IF I 
Sbjct: 83  ISFGLLIGEFDTMRQITQPTLNFFRAVPPASIVPIVIIALGVGATPK--------IFIIA 134

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               W +  +    +      + + +R++R+      + + +P +MP ++  + ++++  
Sbjct: 135 LGCFWPILLNTIDGVRGTSLAVRDTARAYRIPTHLVVFRVALPAAMPQIMAGIRVALAVA 194

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF--- 260
              +V SE            G+G YI  A             + +  + +L   +     
Sbjct: 195 LVLMVISEFFG------ADAGVGFYITEASTRFATRQAWAGTILVGIIGYLLSGVFLQVE 248

Query: 261 RPMIVW 266
           R ++ W
Sbjct: 249 RRVLGW 254


>gi|297584208|ref|YP_003699988.1| glycine betaine ABC transporter substrate-binding protein [Bacillus
           selenitireducens MLS10]
 gi|297142665|gb|ADH99422.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Bacillus selenitireducens MLS10]
          Length = 517

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L +++L ++   +    L A++IS+        + A  R     ++ +  ++Q+IP L 
Sbjct: 18  DLLLNALWEHIHMS----LIALLISVFIAVPLGVVLAHYRSGAEPVIGVTAVLQTIPSLA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L F + +               AI A+    +  +  + Y  +  +   L E SR   +
Sbjct: 74  LLGFLIPFIGIG--------TTPAIVALTAYALMPILRNTYTGIKEVDPALMEASRGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIA 230
           +  Q+   + +P +MP ++  +  +M           +++VG       I   G+G  I 
Sbjct: 126 NTLQQLHKVQLPLAMPTIMAGIRTAM-----------VLIVGTATLAALIGAGGLGDLIM 174

Query: 231 LAIKEQDLLAI 241
           L I   +   I
Sbjct: 175 LGINRSNNYYI 185



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++I+  I +P+G+ +      +  +     +L   P+      ++  +        +
Sbjct: 32  LIALLISVFIAVPLGVVLAHYRSGAEPVIGVTAVLQTIPSLALLGFLIPFIGIGTTPAIV 91

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+   +      IL N   G         E +    +   +    + LP   P  + G 
Sbjct: 92  ALTAYALM----PILRNTYTGIKEVDPALMEASRGMGMNTLQQLHKVQLPLAMPTIMAGI 147

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG  I     + +
Sbjct: 148 RTAMVLIVGTATLAALIGAG-------GLGDLIMLGINRSN 181


>gi|229060460|ref|ZP_04197823.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH603]
 gi|229133674|ref|ZP_04262500.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST196]
 gi|228649709|gb|EEL05718.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST196]
 gi|228718843|gb|EEL70464.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH603]
          Length = 225

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIIGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIIGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|50122875|ref|YP_052042.1| ABC transporter protein, membrane protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613401|emb|CAG76852.1| ABC transporter protein, membrane protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 254

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 83/248 (33%), Gaps = 11/248 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
            E++           +L +FW   V    +   +    +  +   F     + +      
Sbjct: 2   REHWTSKLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVDTLSYMFQSFADVSMRTDIGA 61

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R +     A++I +P+G+ +G    I   ++       + P++   PL +       
Sbjct: 62  TLYRTLAAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITD 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N     +   +      ILFN   G           A    I+ W  ++ I+L      
Sbjct: 122 ANKIAISAFAAVLV----ILFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI    
Sbjct: 178 TFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQVFNIRDMYASILITGAL 232

Query: 566 VLALNRFL 573
              LN   
Sbjct: 233 GYLLNVLF 240



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 95/259 (36%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +  +L F+     ++           P D +  +  +    S+      T  R L
Sbjct: 8   KLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVDTLSYMFQSFADVSMRTDIGATLYRTL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   + L       +   + ++   L  ++D  +S P    +   ++ F      K+  
Sbjct: 68  AAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITDANKIAI 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  AA+  I         F+    + N  +     ++   +S W  F  + +  S+    
Sbjct: 128 SAFAAVLVI--------LFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQTF 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +T     G+G  I  A +  ++  +  ++L    + +
Sbjct: 180 VGLRTGVSMALVIVIVAEMFIGSET-----GLGHRIIDAQQVFNIRDMYASILITGALGY 234

Query: 254 LYDQLLF---RPMIVWSNK 269
           L + L     + ++ WS K
Sbjct: 235 LLNVLFLIAEKRIVHWSGK 253


>gi|313901679|ref|ZP_07835111.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313468056|gb|EFR63538.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 296

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A +T   +L+A VI++         A++S  L  VL P+LD+MQ++P    L   V+
Sbjct: 89  WEPAMQTLALVLAATVIAVGVGIPLGIAASRSAMLRAVLRPVLDLMQTLPAFVHLLPAVL 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     +FA+  +            +  +P D+ E  R+F  +  Q   
Sbjct: 149 FFGA---GVVPGLLATVVFAVPPA-----IRLTDLGIRQVPADVVEAGRAFGSTPNQILR 200

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + M          PG+G+ +   +   D+   
Sbjct: 201 KIQLPLALPTIMAGVNQVIMLALSMVVIAGMA-------GAPGLGAEVVRGLTALDIPLG 253

Query: 242 LYAMLTMLGVIFLYDQL 258
           + + L ++ +    D++
Sbjct: 254 VESGLAVVLLAVYLDRV 270



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 75/225 (33%), Gaps = 16/225 (7%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGI 406
           V  V + +AW   G     F     + V  +G       T+  V+   +IA  + IP+GI
Sbjct: 56  VMAVLVALAWWLRGRGFGLFAAAAFVLVWAMGEWEPAMQTLALVLAATVIAVGVGIPLGI 115

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  + + ++P   L+   PA V     V       +   L   +          + 
Sbjct: 116 AASRSAMLRAVLRPVLDLMQTLPAFVHLLPAVLFFGAGVVPGLLATVVF----AVPPAIR 171

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G    P D  E   +F  T  +  R I LP   P  + G       A +  +++ +
Sbjct: 172 LTDLGIRQVPADVVEAGRAFGSTPNQILRKIQLPLALPTIMAGVNQVIMLALSMVVIAGM 231

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           A          GLGA +         P  V   L +    + L+R
Sbjct: 232 AG-------APGLGAEVVRGLTALDIPLGVESGLAVVLLAVYLDR 269


>gi|114707706|ref|ZP_01440601.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
 gi|114536950|gb|EAU40079.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
          Length = 268

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  +++  ++ ++    +    P  + D          L  + + T +R+  A V +++
Sbjct: 32  LLGLLVIWWVVAVIAD-SRVLPTPPAVFDAFWRDAATGELWFHLAMTLMRVFFAFVAAMV 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SR       P L +  +IP L  +    ++F           E+AAI A
Sbjct: 91  IGSAIGIALGISREANRFFDPWLILFLNIPALVVIVLAYIWFGLN--------EVAAIGA 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +++ N+  +M +    + RDL E++  +R    ++  ++ +P   P         ++
Sbjct: 143 IAVNKIPNVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQLQPYFAAASRSGLA 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   +  E++          G+G  I L  +  D+  IL   L  + V+ L + L+ +
Sbjct: 203 LIWKIALVVELLG------RSDGVGFQINLYFQLFDVAGILAYTLAFVAVMLLIELLIVQ 256

Query: 262 PMIVWSNKFR 271
           P+   + ++R
Sbjct: 257 PLEAHATRWR 266



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 90/262 (34%), Gaps = 23/262 (8%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGC------- 384
            +N+R +  L       +  + + + W  +  I +     T   V    W          
Sbjct: 13  GTNRRATRSLTPKAVTALSLLGLLVIWWVVAVIADSRVLPTPPAVFDAFWRDAATGELWF 72

Query: 385 ---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+ RV    + A +I   +GI +G     +    P+  L    PA V   L     
Sbjct: 73  HLAMTLMRVFFAFVAAMVIGSAIGIALGISREANRFFDPWLILFLNIPALVVIVLAYIWF 132

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   +     +       ++  +  GA A   D  E+A  +     +  R+++LP 
Sbjct: 133 GL----NEVAAIGAIAVNKIPNVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQ 188

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + PY+   + +     W  ++V E+        R+ G+G  I    +      ++   L 
Sbjct: 189 LQPYFAAASRSGLALIWKIALVVELLG------RSDGVGFQINLYFQLFDVAGILAYTLA 242

Query: 562 MCCFVLALNRFLWHPLYLYGTR 583
               +L +   +  PL  + TR
Sbjct: 243 FVAVMLLIELLIVQPLEAHATR 264


>gi|319936612|ref|ZP_08011025.1| glycine betaine/carnitine/choline transport system permease opucb
           [Coprobacillus sp. 29_1]
 gi|319808169|gb|EFW04734.1| glycine betaine/carnitine/choline transport system permease opucb
           [Coprobacillus sp. 29_1]
          Length = 520

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++  Q++  ++ L    +   V+ I I+ ++ IP+GI I +       +   A L+ A P
Sbjct: 6   NYFIQNISTILGLFVEHVQLTVLAIFISIVVGIPLGILITYFKPSKKPVMAIANLIQAIP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +      ++  +            +++I  +   I+ N +AG  +   +  E A    +T
Sbjct: 66  SMALLGFMIPLLGIGTK----PAIVMVILYSLLPIIKNTVAGLDSINEETLEAAKGIGLT 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + +P   P  + G   +   +     ++     G       GLG  +      
Sbjct: 122 RLQVLYKVQIPLAAPVIMAGVRISAVSSVGLMTLAAFIGAG-------GLGYLVYAGIRT 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +  +++ G +  C   L ++   
Sbjct: 175 TNTDQILAGAIPACILALVIDYIF 198



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 74/203 (36%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ ++           + A+ IS++       L    +     ++ I +++Q+IP +  L
Sbjct: 11  NISTILGLFVEHVQLTVLAIFISIVVGIPLGILITYFKPSKKPVMAIANLIQAIPSMALL 70

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F +                 AI  +    +  +  +    L +I  +  E ++   L+ 
Sbjct: 71  GFMIPLLGIG--------TKPAIVMVILYSLLPIIKNTVAGLDSINEETLEAAKGIGLTR 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  + + +P + P ++  + +S        V+S  ++     I   G+G  +   I+  
Sbjct: 123 LQVLYKVQIPLAAPVIMAGVRIS-------AVSSVGLMTLAAFIGAGGLGYLVYAGIRTT 175

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           +   IL   +    +  + D + 
Sbjct: 176 NTDQILAGAIPACILALVIDYIF 198


>gi|182679023|ref|YP_001833169.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634906|gb|ACB95680.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 348

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                +   ++     ++  +   I   ++    +G+ +G    +     P  +L+   P
Sbjct: 138 EVFLDEGGKLLESVLASLELLSFGIFFGALTGFALGVGLGCWKAVGYWFHPVLRLIGPLP 197

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P+        H         L+     + +     +G       + +VA +   +
Sbjct: 198 PVAWLPIAFYVFPSSHS----ASIFLIALAVGFPVTILTWSGVRGVDPTYYDVARTMGAS 253

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W     + +P   P+   G     G ++   + +E+           GLG Y+  +   
Sbjct: 254 RWFLIVKVAIPAALPHVFIGLFMGLGASFVVLVTAEMMG------VKAGLGFYMQWAQGW 307

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            ++  +   +L+M     +L   L+ 
Sbjct: 308 AAYANMYACLLVMALMCSSLVTLLFK 333



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 14/248 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P    L  F      +      +     P     +     +   L +    +   + 
Sbjct: 100 RFLPWSLVLGLFFAAWEWLTAKSGVLPMPFFPPPQALLEVFLDEGGKLLESVLASLELLS 159

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +    L  F         + +G    P+L ++  +P + +L      F          
Sbjct: 160 FGIFFGALTGFALGVGLGCWKAVGYWFHPVLRLIGPLPPVAWLPIAFYVF--------PS 211

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  A+IF I  +  + +T   +  +  +     +V+R+   S W     + +P ++P + 
Sbjct: 212 SHSASIFLIALAVGFPVTILTWSGVRGVDPTYYDVARTMGASRWFLIVKVAIPAALPHVF 271

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + M +   +  +V +EM+ V        G+G Y+  A        +   +L M  +  
Sbjct: 272 IGLFMGLGASFVVLVTAEMMGVKA------GLGFYMQWAQGWAAYANMYACLLVMALMCS 325

Query: 254 LYDQLLFR 261
               LLF+
Sbjct: 326 SLVTLLFK 333


>gi|229097301|ref|ZP_04228263.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-29]
 gi|229103389|ref|ZP_04234071.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-28]
 gi|229116297|ref|ZP_04245687.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-3]
 gi|228667129|gb|EEL22581.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock1-3]
 gi|228679885|gb|EEL34080.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-28]
 gi|228686112|gb|EEL40028.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-29]
          Length = 225

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|120609783|ref|YP_969461.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120588247|gb|ABM31687.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 258

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----TM 387
            +    +   ++L      +   V  G+      +      +  ++   W+       T 
Sbjct: 5   HRKRVERWSPWVLLFAVIVLWQVVCSGLGVSEFIFPSPLAIWNQLVEFKWVIAGHAWRTF 64

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +  +    IA ++ + +G  IG      + I P      A P   F P++V         
Sbjct: 65  WVTMAGFGIAIVVGVLLGFVIGSSRLAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAG- 123

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 L     + + I+ N+  G +    + ++V        W     + LP   PY+ 
Sbjct: 124 ---PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLTKVGLPRSLPYFY 180

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                A   A+  + VSE+           G+G  +  +           G++++    +
Sbjct: 181 GSLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSSMQMGLAFAGLMVVGAMAM 234

Query: 568 ALNRFL 573
           A+    
Sbjct: 235 AMYELF 240



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 89/242 (36%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL  V+V+  +     G+ E   P  +     +      +  +A RT    ++   
Sbjct: 13  SPWVLLFAVIVLWQVVCSGLGVSEFIFPSPLAIWNQLVEFKWVIAGHAWRTFWVTMAGFG 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+++   +   +   SR     + P++    ++P   F+   VV+F              
Sbjct: 73  IAIVVGVLLGFVIGSSRLAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGP-------- 124

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P S+P    ++ 
Sbjct: 125 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLTKVGLPRSLPYFYGSLK 184

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +     +
Sbjct: 185 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSSMQMGLAFAGLMVVGAMAMAMYE 238

Query: 258 LL 259
           L 
Sbjct: 239 LF 240


>gi|309811481|ref|ZP_07705263.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308434532|gb|EFP58382.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 311

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRML 73
           +   +  L   VL   ++            P  DI   +  +L           +  R  
Sbjct: 59  VLAPLGALAIVVLAWQVLVWAHVKPAWVLPPVTDIARALWTSLTSGEALDAIWVSLRRGA 118

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL+       +  ++R       P+L  MQS+P + ++ F V+ F          
Sbjct: 119 VGFALSLVLGTTLGLVVGRARLARRAFRPLLAAMQSLPSVAWVPFAVMMFYLSDTTMYA- 177

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   I  S V ++   +   L  +P   E   R+   S  Q   ++ +P +MP  +
Sbjct: 178 -------VILLSAVPSIAMGLIGGLDQVPPLFERAGRALGASRTQLVRHVLLPAAMPTYL 230

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
             +    +  W  ++A+E+IV    +    G+GS +       D+ A++ A+
Sbjct: 231 GGIKQGWAFAWRSLMAAELIVQSPKLG--FGLGSMLNQGQANSDMPAVMAAI 280



 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 9/217 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              + W  V     +         +    T  + L  IW   +++ R  V   ++ ++  
Sbjct: 73  WQVLVWAHVKPAWVLPPVTDIARALWTSLTSGEALDAIW---VSLRRGAVGFALSLVLGT 129

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G         +P    + + P+  + P  V             +  +++     
Sbjct: 130 TLGLVVGRARLARRAFRPLLAAMQSLPSVAWVPFAVMMFYLSDTT----MYAVILLSAVP 185

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I   +I G    P  F+    +   +  +  R+++LP   P Y+ G       AW + +
Sbjct: 186 SIAMGLIGGLDQVPPLFERAGRALGASRTQLVRHVLLPAAMPTYLGGIKQGWAFAWRSLM 245

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
            +E+           GLG+ + +       P V+  +
Sbjct: 246 AAELIV--QSPKLGFGLGSMLNQGQANSDMPAVMAAI 280


>gi|167034347|ref|YP_001669578.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860835|gb|ABY99242.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 250

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 92/251 (36%), Gaps = 17/251 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L   + N  L        P ++   +   L    L ++ + +  R+        L
Sbjct: 14  LALLTLWAAVANAGLFPANLLIPPLEVWHSLTDLLATGELQEHLAGSLSRLALGFTGGAL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +    A S+ +     P+   ++ +P +  +   V+ F           E   +  
Sbjct: 74  AGLAFGAALALSKTVEAYCAPLFHTLRQVPSIALIPMFVLLFGVD--------ETFKVVI 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +    +  +  + +  IPR   EV+  +RL        + +P ++P +V  + ++++
Sbjct: 126 VAKTAFVPVALATCEGIRAIPRSHFEVAAVYRLRWPTLVGRIALPAAVPAIVTGIRVALT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +VA E++          G+G  I +  +   +  ++  ++    + F  D   + 
Sbjct: 186 RAWVVLVACELLAADS------GLGQMIEMGRQMLRIDVVMVGVVLTGLIGFALDFTLRR 239

Query: 259 LFRPMIVWSNK 269
           + R +  W N+
Sbjct: 240 VERRLSAWQNR 250



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 77/254 (30%), Gaps = 20/254 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVV 392
           +S+ +       +              ++        L  +            ++ R+ +
Sbjct: 7   LSWFISPLALLTLWAAVANAGLFPANLLIPPLEVWHSLTDLLATGELQEHLAGSLSRLAL 66

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
                ++  +  G  +     + +   P    L   P+    P+ V            + 
Sbjct: 67  GFTGGALAGLAFGAALALSKTVEAYCAPLFHTLRQVPSIALIPMFVLLFGV----DETFK 122

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++       +      G  A P    EVA+ + +        I LP   P  VTG   
Sbjct: 123 VVIVAKTAFVPVALATCEGIRAIPRSHFEVAAVYRLRWPTLVGRIALPAAVPAIVTGIRV 182

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN-- 570
           A   AW   +  E+ +        +GLG  I    +      V++GV++      AL+  
Sbjct: 183 ALTRAWVVLVACELLA------ADSGLGQMIEMGRQMLRIDVVMVGVVLTGLIGFALDFT 236

Query: 571 -RFLWHPLYLYGTR 583
            R +   L  +  R
Sbjct: 237 LRRVERRLSAWQNR 250


>gi|116511668|ref|YP_808884.1| choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116107322|gb|ABJ72462.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 500

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 21/204 (10%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD---IMQSIPILGF 115
               Q         L ++ I++L +   A L    RR   +  PIL    I Q+IP L  
Sbjct: 13  GQFWQAFLEHIQISLISIFIAILISIPLALLL---RRFPKIAEPILQVTGIFQTIPSLAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +             L AI A+    ++ +  + Y  L  I   L E + +F ++
Sbjct: 70  LGLLIPFIGIG--------SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMN 121

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             ++     +  +MP ++  +  S          + +I  G       G+G++I L I  
Sbjct: 122 RRERLMKFELSLAMPFIMAVIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINM 174

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D+  IL   ++   +  ++  LL
Sbjct: 175 NDVSLILIGAISSALLAIIFSSLL 198



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 71/203 (34%), Gaps = 12/203 (5%)

Query: 372 TYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           T+Q+     W   +   ++ ++ I IA +I IP+ + +   P I+  I     +    P+
Sbjct: 7   TFQNQQGQFWQAFLEHIQISLISIFIAILISIPLALLLRRFPKIAEPILQVTGIFQTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L++  +       +L   + ++    + I+ N   G         E A++F +  
Sbjct: 67  LALLGLLIPFIGIG----SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNR 122

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                   L    P+ +    T+       + ++ +   G       GLG +I       
Sbjct: 123 RERLMKFELSLAMPFIMAVIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMN 175

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               +++G +      +  +  L
Sbjct: 176 DVSLILIGAISSALLAIIFSSLL 198


>gi|78062912|ref|YP_372820.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77970797|gb|ABB12176.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 273

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 89/235 (37%), Gaps = 13/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+AF L   + +  L        P D++          +L +  S +  R      I   
Sbjct: 33  LVAFALWWAVASAHLVSSGLLVGPADVLRTAWAQATSGALGRALSASLAREACGFAIGAT 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 93  SGLLLGAALGLSRVAARIVGPSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALLP 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +PR   +V+R+ R S  Q   Y+ +P ++P +   + + + 
Sbjct: 153 VAAHTC--------DGIHAVPRAYVDVARALRYSRLQLVRYVILPAALPSIFTGLYLGLI 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +    +  +
Sbjct: 205 YSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLFGIIVVGVTGWALN 254



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 12/255 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
              T    R H P+    +      +    +    +V    +      +       T   
Sbjct: 12  PPATTTARRLHAPDWRGFVLPLVAFALWWAVASAHLVSSGLLVGPADVLRTAWAQATSGA 71

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +   +     ++ R      I +   + +G  +G     +  + P            + P
Sbjct: 72  LGRAL---SASLAREACGFAIGATSGLLLGAALGLSRVAARIVGPSFDTFKQISLFAWIP 128

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+        +   ++LS          +  +   G  A P  + +VA +   +  +  R
Sbjct: 129 LISVWFGLGDVAKVVFLS----LAALLPVAAHTCDGIHAVPRAYVDVARALRYSRLQLVR 184

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ILP   P   TG       +W A++ +E        +  +G+G  + + +E+     V
Sbjct: 185 YVILPAALPSIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLV 239

Query: 556 VLGVLIMCCFVLALN 570
           + G++++     ALN
Sbjct: 240 LFGIIVVGVTGWALN 254


>gi|317506424|ref|ZP_07964228.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
 gi|316255276|gb|EFV14542.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
          Length = 269

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L  ++  +               L  +L P L  ++++P L +    V
Sbjct: 71  LWEHLYMTLRRVLFGVLAGVATGVAVGLAMGTVGWLRNLLDPWLTFLRALPPLAYFPLLV 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S  Q  
Sbjct: 131 IWLGIDEAPKITVLALAALPPAAVATTAAVLAAPVS--------LVEAARALGGSRAQVI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P  +  + +++   +  VVA+E+         +PGIG  +  A    +   
Sbjct: 183 RDVVLPAALPETLTGIRVAVGIAYTTVVAAELF------NGIPGIGGMVKDASNYNNTAV 236

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  ++ +     + D  L    R ++ W  K
Sbjct: 237 VLVGIIVIGVCGLIVDGFLKSAERILVPWRGK 268



 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 81/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV+  ++      + VG+ +G    + + + P+   L A P   +FPL+V  +  
Sbjct: 76  YMTLRRVLFGVLAGVATGVAVGLAMGTVGWLRNLLDPWLTFLRALPPLAYFPLLVIWLGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L+L  +          V+A   +      E A +   +  +  R ++LP   
Sbjct: 136 DEAPKITVLALAALPPAAVATTAAVLAAPVS----LVEAARALGGSRAQVIRDVVLPAAL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G A+   + +E+ +         G+G  + +++   +   V++G++++ 
Sbjct: 192 PETLTGIRVAVGIAYTTVVAAELFNG------IPGIGGMVKDASNYNNTAVVLVGIIVIG 245

Query: 564 CFVLALNRFL 573
              L ++ FL
Sbjct: 246 VCGLIVDGFL 255


>gi|41406244|ref|NP_959080.1| hypothetical protein MAP0146 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394592|gb|AAS02463.1| hypothetical protein MAP_0146 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 233

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +   P D+V  +        L  +   +  R+L+             +L   S     +
Sbjct: 16  SQLPPPGDVVAALSDLARHGELWTHLRASGWRVLAGYASGAAAGLALGSLVGLSATARRL 75

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P +   +++P L ++   +++F      K++   + A F ++T+           +L 
Sbjct: 76  LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAIGAFFPVYTT--------TASALS 127

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +I   L EV R++   G      + +P + P LV  + + ++  W FVVA+E+I      
Sbjct: 128 HIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVVAAELIASSK-- 185

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G  +  +        +L A++ + G+  L D  L
Sbjct: 186 ----GLGFLLIDSQNSGRTDVMLLAIVLLAGLGKLSDAAL 221



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 10/200 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            + +RV+      +   + +G  +G        + P        P+  + PL++      
Sbjct: 43  ASGWRVLAGYASGAAAGLALGSLVGLSATARRLLAPTVAAFRTVPSLAWVPLLLLWFGI- 101

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L++  G  + +     +  S       EV  ++   G      ++LP   P
Sbjct: 102 ---DETPKILMVAIGAFFPVYTTTASALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAP 158

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V G       AW   + +E+ +       + GLG  + +S   G    ++L ++++  
Sbjct: 159 ELVNGLRLGLANAWLFVVAAELIA------SSKGLGFLLIDSQNSGRTDVMLLAIVLLAG 212

Query: 565 FVLALNRFLWHPLYLYGTRC 584
                +  L         R 
Sbjct: 213 LGKLSDAALGAVETRIARRR 232


>gi|108802309|ref|YP_642506.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871462|ref|YP_941414.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126438291|ref|YP_001073982.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772728|gb|ABG11450.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697551|gb|ABL94624.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126238091|gb|ABO01492.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 271

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 79/214 (36%), Gaps = 13/214 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q     V       +   +W    T     + + IA ++    GI +G    + + ++P 
Sbjct: 56  QIAAAFVGELGGPALGPALWSTASTWL---LALCIAVVLGTVAGIGLGLLVPLEALLRPV 112

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            + L   P+    PLVV  +     +       L +F   W +L   IAG  A      E
Sbjct: 113 IEFLRPVPSVALIPLVVLTIGTGSQS----ALFLAVFAAFWQVLVPAIAGVRAAHPVALE 168

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S+H+T W+  R+I LP + PY  T    A        + +E+       ++  G+G 
Sbjct: 169 TARSYHLTVWQRIRWIQLPSMLPYLATAIRLATSTTLILVVTAEII------IQMPGIGY 222

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            I  S   G    +   + +     + LN  +  
Sbjct: 223 EITMSRSAGDPARMYAYIAVSGLAGIVLNALMRR 256



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 14/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ I+++   V          L  +L P+++ ++ +P +  +   V+           
Sbjct: 82  LLALCIAVVLGTVAGIGLGLLVPLEALLRPVIEFLRPVPSVALIPLVVLTIGTG------ 135

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +A+F    +  W +       +        E +RS+ L+ WQ+  ++ +P  +P L
Sbjct: 136 --SQSALFLAVFAAFWQVLVPAIAGVRAAHPVALETARSYHLTVWQRIRWIQLPSMLPYL 193

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ S     VV +E+I      I +PGIG  I ++    D   +   +       
Sbjct: 194 ATAIRLATSTTLILVVTAEII------IQMPGIGYEITMSRSAGDPARMYAYIAVSGLAG 247

Query: 253 FLYDQLLFR 261
            + + L+ R
Sbjct: 248 IVLNALMRR 256


>gi|72163328|ref|YP_290985.1| polysaccharide/polyol phosphate ABC transporter permease
           [Thermobifida fusca YX]
 gi|71917060|gb|AAZ56962.1| similar to ABC-type proline/glycine betaine transport system
           permease component [Thermobifida fusca YX]
          Length = 415

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L A +I+++       +AA S  +  ++ P+LD+MQ++P   +L   + +F 
Sbjct: 219 AMSTLALVLVASLIAVVIAIPIGIVAAYSTVVSRIVKPVLDLMQTMPAFVYLIPAIFFFS 278

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G     +FA+               +  I +++ E   +F  S ++    + 
Sbjct: 279 L---GAVPGVVATVVFAMPPG-----VRLTELGIRQIDKEVVEAGEAFGASPFKILTGIQ 330

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  ++  +   +  G   VV + M+  G       G+G+ +   I   D       
Sbjct: 331 LPLALSTIMAGVNQVIMLGLSMVVIAGMVGAG-------GLGNQVYQGISRNDGALGFEG 383

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +    D+L
Sbjct: 384 GIAVVILAIFLDRL 397



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 74/228 (32%), Gaps = 11/228 (4%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            +    +     +   W+   + +   T    +        T+  V+V  +IA +I IP+
Sbjct: 181 ILMMLLLSTLAWVVAGWKLGVFSLVALTLVISIEQWSNAMSTLALVLVASLIAVVIAIPI 240

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI   +   +S  ++P   L+   PA V+    +   S   +   +   +          
Sbjct: 241 GIVAAYSTVVSRIVKPVLDLMQTMPAFVYLIPAIFFFSLGAVPGVVATVVF----AMPPG 296

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G      +  E   +F  + ++    I LP      + G         +  +++
Sbjct: 297 VRLTELGIRQIDKEVVEAGEAFGASPFKILTGIQLPLALSTIMAGVNQVIMLGLSMVVIA 356

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   G       GLG  + +   +        G + +    + L+R 
Sbjct: 357 GMVGAG-------GLGNQVYQGISRNDGALGFEGGIAVVILAIFLDRL 397


>gi|169343007|ref|ZP_02864035.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens C str. JGS1495]
 gi|182625055|ref|ZP_02952832.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens D str. JGS1721]
 gi|169298916|gb|EDS80990.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens C str. JGS1495]
 gi|177909675|gb|EDT72101.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens D str. JGS1721]
          Length = 517

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|313899891|ref|ZP_07833394.1| ABC transporter, substrate-binding protein, QAT family [Clostridium
           sp. HGF2]
 gi|312955506|gb|EFR37171.1| ABC transporter, substrate-binding protein, QAT family [Clostridium
           sp. HGF2]
          Length = 515

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V + +       L A+ R+   + + I+  + +IP +  L F +       P   IG
Sbjct: 29  IAIVFATIVGVSIGILIAEKRKASSLTLGIISFLYTIPSISMLGFLI-------PVTGIG 81

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              +AI A+    +  +  S Y  +  +  D+ E +R    +  Q  W + +P +MP ++
Sbjct: 82  -NTSAIIALSIYALLPIIRSTYTGITGVEEDILEAARGMGSTAAQILWRIKLPLAMPVIL 140

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                        VV +  +    + I   G+G  I   I   +L   L   L +  + F
Sbjct: 141 SGFK-------NMVVMTIALAGIASFIGAGGLGVAIYRGITTNNLTMTLAGSLAVAVLAF 193

Query: 254 LYDQLL 259
           ++D L+
Sbjct: 194 VFDILM 199



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 11/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q   +++ L    +    + I+ A+I+ + +GI I  +   SS        L   P+   
Sbjct: 11  QRWDFLLPLIYEHLQISAIAIVFATIVGVSIGILIAEKRKASSLTLGIISFLYTIPSISM 70

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++      + +  + LS+  +      I+ +   G +    D  E A     T  + 
Sbjct: 71  LGFLIPVTGIGNTSAIIALSIYALL----PIIRSTYTGITGVEEDILEAARGMGSTAAQI 126

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G         N  +++   +     +   GLG  I       +  
Sbjct: 127 LWRIKLPLAMPVILSGFK-------NMVVMTIALAGIASFIGAGGLGVAIYRGITTNNLT 179

Query: 554 EVVLGVLIMCCFVLALNRFL 573
             + G L +       +  +
Sbjct: 180 MTLAGSLAVAVLAFVFDILM 199


>gi|228915387|ref|ZP_04078980.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228844330|gb|EEM89388.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 225

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 32/233 (13%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W+       +      + +I+N   +   +  + L   ++   +++ I   I+      
Sbjct: 9   IWYTTRKVSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA----- 63

Query: 407 WIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
                   S  ++P    +          PA          ++++ +     +   +IF 
Sbjct: 64  --SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIFA 111

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I F    G    P D  E A++F  T  +    + LP      + G   +   + +
Sbjct: 112 MPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS 170

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 171 MVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|229046484|ref|ZP_04192139.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH676]
 gi|296503326|ref|YP_003665026.1| glycine betaine transport system permease [Bacillus thuringiensis
           BMB171]
 gi|228724846|gb|EEL76148.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH676]
 gi|296324378|gb|ADH07306.1| glycine betaine transport system permease protein [Bacillus
           thuringiensis BMB171]
          Length = 225

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 32/233 (13%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W+       +      + +I+N   +   +  + L   ++   +++ I   I+      
Sbjct: 9   IWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA----- 63

Query: 407 WIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
                   S  ++P    +          PA          ++++ +     +   +IF 
Sbjct: 64  --SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIFA 111

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I F    G    P D  E A++F  T  +    + LP      + G   +   + +
Sbjct: 112 MPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS 170

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 171 MVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|228985879|ref|ZP_04146027.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229156363|ref|ZP_04284458.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 4342]
 gi|228627086|gb|EEK83818.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus ATCC 4342]
 gi|228773808|gb|EEM22226.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 225

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLSLVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKVSLVIFTLIGLLFILNINYWAQTMQTLSLVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|134096489|ref|YP_001101564.1| putative transmembranee ABC transporter protein [Herminiimonas
           arsenicoxydans]
 gi|133740392|emb|CAL63443.1| ABC transporter, permease component [Herminiimonas arsenicoxydans]
          Length = 308

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 93/240 (38%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++  +   +L+          +V+ +   +    L      +   +L      L+
Sbjct: 65  LVLLAVIWEVYARMLNNTLLFPTFSSVVEALVEGVISGGLLGKVWFSIKILLMGYGAGLV 124

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A  SR     L  +  +   +P +  L  ++++F             + +F 
Sbjct: 125 LAALLTVFAITSRIGRDFLETLTSMFNPLPAIALLPLSLLWFGLGTG--------SLVFV 176

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S VW +  + +    ++   L  V  ++ LSG +  + + +P + P ++  + +  +
Sbjct: 177 LIHSVVWAVALNTHSGFQSVSTTLRMVGHNYGLSGLRYVFQILIPAAFPSILTGLKIGWA 236

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +       G +I     + ++ ++   +LT++ +    +  +FR
Sbjct: 237 FAWRTLIAAELVFGVSSGSGGL--GWFIYENKNQLEIPSVFAGLLTVIMIGLFVENFIFR 294



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 16/275 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
              +          F   +  L        +         V+  V   +  + +   +  
Sbjct: 26  ERPEYYANRAPSTEFGVVQKPLTSWEKLHNNSGARKIGILVLLAVIWEVYARMLNNTLLF 85

Query: 371 FTYQDVLYVIWLGCIT----------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
            T+  V+  +  G I+          +  +++      ++   + ++          ++ 
Sbjct: 86  PTFSSVVEALVEGVISGGLLGKVWFSIKILLMGYGAGLVLAALLTVFAITSRIGRDFLET 145

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +    PA    PL +        +    L  ++I    W +  N  +G  +     +
Sbjct: 146 LTSMFNPLPAIALLPLSLLWFGLGTGS----LVFVLIHSVVWAVALNTHSGFQSVSTTLR 201

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            V  ++ ++G R+   I++P  FP  +TG       AW   I +E+             G
Sbjct: 202 MVGHNYGLSGLRYVFQILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--G 259

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +I E+  +   P V  G+L +    L +  F++ 
Sbjct: 260 WFIYENKNQLEIPSVFAGLLTVIMIGLFVENFIFR 294


>gi|325518980|gb|EGC98508.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia sp. TJI49]
          Length = 335

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 8/171 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +        L ++   +  R+L       L  F        SR     ++
Sbjct: 60  LPPPEQVYQALAELAASGDLLRHTLISLQRVLVGFAAGTLLGFAIGAALGLSRTFEAYVL 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K +         I  + +  +T S  Q     
Sbjct: 120 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------LIAHAALVPVTLSTLQGFRQT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +  W  +V  E+
Sbjct: 172 PAALDEVARGFGYTRRQRIVHVVLPAAVPTLATGVRLAFTKSWLALVVVEL 222



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----- 378
                    +  + +R++++L  +    +      I               + +Y     
Sbjct: 13  PHALGAASRRRAAVKRLAWLLAPWVLPALLFTLWSIGSARGWIAPQILPPPEQVYQALAE 72

Query: 379 ------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++    I++ RV+V     +++   +G  +G      + + P    L   P   
Sbjct: 73  LAASGDLLRHTLISLQRVLVGFAAGTLLGFAIGAALGLSRTFEAYVLPSFNALVQIPVLG 132

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P ++  V            LL+       +  + + G    P    EVA  F  T  +
Sbjct: 133 WLPFLLLLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQ 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              +++LP   P   TG   A   +W A +V E+
Sbjct: 189 RIVHVVLPAAVPTLATGVRLAFTKSWLALVVVEL 222


>gi|257093017|ref|YP_003166658.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045541|gb|ACV34729.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 265

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              +    +V    +   WQ +              ++     ++ R++V  ++  +I I
Sbjct: 31  WSAVAASGLVSATKLPAPWQVVSAFGYLAWNDGQSMLLTATLWSVGRLIVAGLLVILIGI 90

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +G  P +++ + P      + P     P++V  +              +  G   
Sbjct: 91  PIGIVMGAAPQVNAALSPLVDPFRSAPVVALLPILVMWMGIG----ESMKIAFLFIGAVV 146

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y++  V     A P  +   A     T W   R  ++P   P      I A    W    
Sbjct: 147 YLIPMVRDAIQAVPQSYWIGARDLGATPWECIRSAVVPMAMPRIADAVIVAFSVMWTYIT 206

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL-W--HPLYL 579
           V+E  +         GLG  I  +    ++ +V  G++++    LA  + + W    LY 
Sbjct: 207 VAEYVN------AREGLGQLIQNARRFSAWDQVFAGIMVIIALALATYQLMIWLKRRLYP 260

Query: 580 Y 580
           +
Sbjct: 261 W 261



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 94/265 (35%), Gaps = 20/265 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI---VPITLDVHSLPQY 64
           P    RR+      L   +L   +    L    +   P  +V     +        L   
Sbjct: 11  PDPQRRRLLGVGSVLALLLLWSAVAASGLVSATKLPAPWQVVSAFGYLAWNDGQSMLLTA 70

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R++ A ++ +L       +   + ++   L P++D  +S P++  L   V++  
Sbjct: 71  TLWSVGRLIVAGLLVILIGIPIGIVMGAAPQVNAALSPLVDPFRSAPVVALLPILVMWMG 130

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   I  +F   V  +   +  ++  +P+     +R    + W+      
Sbjct: 131 IG--------ESMKIAFLFIGAVVYLIPMVRDAIQAVPQSYWIGARDLGATPWECIRSAV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP +MP +   ++++ S  W ++  +E +          G+G  I  A +      +   
Sbjct: 183 VPMAMPRIADAVIVAFSVMWTYITVAEYV------NAREGLGQLIQNARRFSAWDQVFAG 236

Query: 245 MLTMLGVIFLYDQLLF---RPMIVW 266
           ++ ++ +     QL+    R +  W
Sbjct: 237 IMVIIALALATYQLMIWLKRRLYPW 261


>gi|83943670|ref|ZP_00956128.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83954653|ref|ZP_00963364.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840937|gb|EAP80108.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83845350|gb|EAP83229.1| hypothetical taurine ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 242

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +          +      ++ R+ V   + +++ + VG+ IG   ++ + + P    L  
Sbjct: 35  MTFVELWQSGMLFKHLAPSLSRLAVGATLGALVGVGVGVMIGLFSYVRAGLVPLVAALFP 94

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL V        +       L+ FGT    +    A           +  SF 
Sbjct: 95  IPKIALLPLFVIWFGIDEGSK----YALIAFGTFTPTVVATYAAVDNVDRGLIRMGQSFG 150

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++ W   R I+LPG  P  ++G   +   A    + +E+           G+GAYI E+ 
Sbjct: 151 LSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AEYGIGAYILEAG 204

Query: 548 EKGSFPEVVLGVLIMCCFVL 567
                  +  GV+I+    +
Sbjct: 205 SLYDLERLFAGVVILSVLGV 224



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 14/212 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+            L ++ + +  R+     +  L       +      +   LV
Sbjct: 27  LPRPSDVAMTFVELWQSGMLFKHLAPSLSRLAVGATLGALVGVGVGVMIGLFSYVRAGLV 86

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   V++F      K           I          + Y ++ N+
Sbjct: 87  PLVAALFPIPKIALLPLFVIWFGIDEGSKYA--------LIAFGTFTPTVVATYAAVDNV 138

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L  + +SF LS W     + +P +MPG++  + +S++     +VA+EM+        
Sbjct: 139 DRGLIRMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------A 192

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             GIG+YI  A    DL  +   ++ +  +  
Sbjct: 193 EYGIGAYILEAGSLYDLERLFAGVVILSVLGV 224


>gi|326315891|ref|YP_004233563.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323372727|gb|ADX44996.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 258

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 14/246 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----TM 387
            +    +   ++L      +   V  G+      +      +  ++   W+       T 
Sbjct: 5   HRKRVERWSPWVLLFAVIVLWQVVCSGLGVSEFIFPSPLAIWNQLVEFKWIIAGHAWRTF 64

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +  +    IA ++ + +G  IG      + I P      A P   F P++V         
Sbjct: 65  WVTMAGFGIAIVVGVLLGFVIGSSRLAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAG- 123

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 L     + + I+ N+  G +    + ++V        W     + LP   PY+ 
Sbjct: 124 ---PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLTKVGLPRSLPYFY 180

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                A   A+  + VSE+           G+G  +  +           G++++    +
Sbjct: 181 GSLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSSMQMGLAFAGLMVVGAMAM 234

Query: 568 ALNRFL 573
            +    
Sbjct: 235 VMYELF 240



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL  V+V+  +     G+ E   P  +     +      +  +A RT    ++   
Sbjct: 13  SPWVLLFAVIVLWQVVCSGLGVSEFIFPSPLAIWNQLVEFKWIIAGHAWRTFWVTMAGFG 72

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+++   +   +   SR     + P++    ++P   F+   VV+F              
Sbjct: 73  IAIVVGVLLGFVIGSSRLAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGP-------- 124

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P S+P    ++ 
Sbjct: 125 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLTKVGLPRSLPYFYGSLK 184

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +  +  +
Sbjct: 185 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSSMQMGLAFAGLMVVGAMAMVMYE 238

Query: 258 LL 259
           L 
Sbjct: 239 LF 240


>gi|229012044|ref|ZP_04169223.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides DSM 2048]
 gi|229167388|ref|ZP_04295126.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH621]
 gi|228615950|gb|EEK73037.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH621]
 gi|228749132|gb|EEL98978.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides DSM 2048]
          Length = 226

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 39  TMQTLALVLTSVIISIIIGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 98

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 99  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 150

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 151 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 203

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 204 GLAIVVIAIILDRI 217



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 9   LIWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIIGIPIGILA---- 64

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 65  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 111

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 112 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 170

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 171 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 217


>gi|182679389|ref|YP_001833535.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182635272|gb|ACB96046.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 278

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 73/237 (30%), Gaps = 22/237 (9%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGC 384
            P   ++    +       + W   V  + +     S+G I  +      +V    W   
Sbjct: 14  LPSLTVKSWILKLFVKADAVAWVVPVGLLFVWQIASSLGLIPVNILPSPKEVAQAGWRLT 73

Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                     ++  R +  +++   I    G   G             Q+L   P     
Sbjct: 74  LSGDLFTNIWVSFLRAMAGLVVGGGIGFVFGFANGLSKLSERLTDTTFQMLRNIPHLALI 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PLV+                L+  G  + I  N + G         E+  S+ ++ +   
Sbjct: 134 PLVILWFGIE----EEAKLFLVALGVFFPIYLNTLHGIRNVDPQLVEMGRSYGLSSFALL 189

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R +ILPG  P  + G     G  W   IV+E  +        +G+G    ++ E   
Sbjct: 190 RRVILPGALPSILVGLRYGLGIMWLTLIVAETIA------AQSGIGYMAMQAREFMQ 240



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 96/253 (37%), Gaps = 18/253 (7%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  I + L L  +     P+++            L      + LR ++ +V+   
Sbjct: 39  VGLLFVWQIASSLGLIPVNILPSPKEVAQAGWRLTLSGDLFTNIWVSFLRAMAGLVVGGG 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV+      S+    +      ++++IP L  +   +++F           E A +F 
Sbjct: 99  IGFVFGFANGLSKLSERLTDTTFQMLRNIPHLALIPLVILWFGIE--------EEAKLFL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    + N+   L E+ RS+ LS +     + +P ++P ++  +   + 
Sbjct: 151 VALGVFFPIYLNTLHGIRNVDPQLVEMGRSYGLSSFALLRRVILPGALPSILVGLRYGLG 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  ++ +E I          GIG     A +   +  +++++L    +  L D   + 
Sbjct: 211 IMWLTLIVAETIA------AQSGIGYMAMQAREFMQVDVVVFSVLVYAALGKLADSTARF 264

Query: 259 LFRPMIVWSNKFR 271
           L    + W   F+
Sbjct: 265 LETLCLQWHPAFQ 277


>gi|227890328|ref|ZP_04008133.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849142|gb|EEJ59228.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 515

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 80/187 (42%), Gaps = 20/187 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+++     A +    ++     + I  I+Q+IP L  L   + +          
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+ A+    +  +  + Y  L  IP +LEE + +  L+ W+K   L +P +MP +
Sbjct: 82  --TVPAVIALVLYAIMPIFQNTYSGLTEIPENLEEAATALGLTKWKKLQRLEIPLAMPMI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
           V  + +++      ++ +  +        L    +YI + I   +     + AIL A+L 
Sbjct: 140 VAGIRIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLA 192

Query: 248 MLGVIFL 254
           ++    L
Sbjct: 193 LIFSGVL 199



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+   +      +      A ++   P+     L++  V    +   +
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  +G +  P + +E A++  +T W+  + + +P   P  V G 
Sbjct: 88  ALVLYAIM----PIFQNTYSGLTEIPENLEEAATALGLTKWKKLQRLEIPLAMPMIVAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A        I +   +             YI       +  EV++G ++     L  +
Sbjct: 144 RIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLALIFS 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|257056604|ref|YP_003134436.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256586476|gb|ACU97609.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 310

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 96/236 (40%), Gaps = 18/236 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  V++ G +  L       TV   +  ++   +D   L     +T   ++ A +I+++ 
Sbjct: 52  LVLVVIFGALAALCVRSVGMTVFAVLAFLL---IDSMQLWHQMLQTLSVVVLAALIAIVV 108

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LAAKS + G+V+ P+LD MQ++P+  +L   V +F     G V G     +FA+
Sbjct: 109 GVPVGVLAAKSPKTGLVVRPVLDFMQTLPVFVYLVPAVFFFG---IGVVPGIVSTTVFAV 165

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +            +  + R+  E +R+F     Q    + +P ++P ++  +   +  
Sbjct: 166 PPA-----VRLTELGIRQVDRETVEAARAFGARPRQVLREVELPLAVPSIMAGVNQVIML 220

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + ++        +          + + ++ A     + ++ +    D++
Sbjct: 221 ALSMVVVAGLVGAEGLGGVV-------VEGVTQLNIGAAFEGGIAVVILAVYLDRI 269



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 7/231 (3%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G +       L+ +   L   +  + F        + +      ++ IF       V  
Sbjct: 9   VGSAVDTAIQWLTTHAGGLFDAISAVLFFLVNLIYGVLAAPPSLVLVVIFGALAALCV-- 66

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +     + V  F   D + +      T+  VV+  +IA ++ +PVG+     P     
Sbjct: 67  -RSVGMTVFAVLAFLLIDSMQLWHQMLQTLSVVVLAALIAIVVGVPVGVLAAKSPKTGLV 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   P  V+    V       +   +  ++          +     G      
Sbjct: 126 VRPVLDFMQTLPVFVYLVPAVFFFGIGVVPGIVSTTVF----AVPPAVRLTELGIRQVDR 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +  E A +F     +  R + LP   P  + G       A +  +V+ +  
Sbjct: 182 ETVEAARAFGARPRQVLREVELPLAVPSIMAGVNQVIMLALSMVVVAGLVG 232


>gi|255035043|ref|YP_003085664.1| binding-protein-dependent transport systems inner membrane
           component [Dyadobacter fermentans DSM 18053]
 gi|254947799|gb|ACT92499.1| binding-protein-dependent transport systems inner membrane
           component [Dyadobacter fermentans DSM 18053]
          Length = 525

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 68/186 (36%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             +++I++          A+ ++   +++ +  I+Q+IP +  L F
Sbjct: 16  GKLWSQTLAHIGLTCISLLIAIAIGLPLGIWIARRQKAAWLVLGVAGILQTIPSIALLGF 75

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               L AI A+F   +  +  + Y  +  +   + E +R   +S WQ
Sbjct: 76  MIPLLGIG--------ALPAITALFLYALLPIIRNTYTGITGVDPAITESARGMGMSAWQ 127

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +MP ++  +  +        V +  +      I   G+G +I   I   + 
Sbjct: 128 ILTGVELPLAMPVILAGIRTA-------TVINVGVATLAAYIAAGGLGEFIFGGIALNNT 180

Query: 239 LAILYA 244
             IL  
Sbjct: 181 QMILAG 186



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA  I +P+GIWI  R   +  +   A +L   P+      ++  +    L    
Sbjct: 30  CISLLIAIAIGLPLGIWIARRQKAAWLVLGVAGILQTIPSIALLGFMIPLLGIGAL---- 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                +       I+ N   G +       E A    ++ W+    + LP   P  + G 
Sbjct: 86  PAITALFLYALLPIIRNTYTGITGVDPAITESARGMGMSAWQILTGVELPLAMPVILAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA       + ++   + G       GLG +I       +   ++ G
Sbjct: 146 RTATVINVGVATLAAYIAAG-------GLGEFIFGGIALNNTQMILAG 186


>gi|206562979|ref|YP_002233742.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198039019|emb|CAR54982.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 280

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 14/198 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +VD +        L ++   +  R+L       L           SR L   ++
Sbjct: 60  LPPPERVVDTLADLASNGDLVRHTLISLQRVLVGFAAGTLLGVSLGVALGLSRTLEAYVL 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K +         I  + +  +T S  Q     
Sbjct: 120 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------LIAHAALVPVTLSTLQGFRQT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 172 PPALDEVARGFGYTRRQRILHVVLPAAIPTLATGVRLAFTKSWLALVVVELVASSE---- 227

Query: 222 LPGIGSYIALAIKEQDLL 239
             G+G  I    +   L 
Sbjct: 228 --GLGYLIVYGRQLFQLD 243



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++ RV+V     +++ + +G+ +G    + + + P    L   P   + P 
Sbjct: 77  GDLVRHTLISLQRVLVGFAAGTLLGVSLGVALGLSRTLEAYVLPSFNALVQIPVLGWLPF 136

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V            LL+       +  + + G    P    EVA  F  T  +   +
Sbjct: 137 LLLLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPPALDEVARGFGYTRRQRILH 192

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P   TG   A   +W A +V E+ +       + GLG  I    +      V+
Sbjct: 193 VVLPAAIPTLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVM 246

Query: 557 LGVLIMCCFVLALNRFL 573
             V+++    L +NR L
Sbjct: 247 AAVVVVGAVGLLINRAL 263


>gi|30249698|ref|NP_841768.1| putative transport system permease [Nitrosomonas europaea ATCC
           19718]
 gi|30180735|emb|CAD85647.1| putative transport system permease [Nitrosomonas europaea ATCC
           19718]
          Length = 278

 Score = 97.3 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 90/197 (45%), Gaps = 14/197 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +  + T  R+   M+  LL +   A +  +   L  +++PI+  +  I  + ++ FT
Sbjct: 81  GLFEATAITLARVGIGMLAGLLVSSCLAVMVIELPLLRRLVLPIVQSLAPIAPVAWIPFT 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +                AA+F +F + +  M+ S+  +L  IP +  +++R+   S  + 
Sbjct: 141 IAVIGIGG--------QAAVFIVFMAVLGTMSLSLIAALDGIPAEYLKIARNLGTSRMRM 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +W++ +P   PG +  + MS  G W  V+A EM  +        G+G  I +A +  ++ 
Sbjct: 193 WWHVRLPAITPGAMTAIRMSFFGAWMAVLAGEMAGINS------GLGYMIIMAQQMYNMK 246

Query: 240 AILYAMLTMLGVIFLYD 256
            ++  +L +  + F  D
Sbjct: 247 LVMIGILAIGFIGFAID 263



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 83/192 (43%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT+ RV + ++   ++   + + +   P +   + P  Q LA      + P  +
Sbjct: 82  LFEATAITLARVGIGMLAGLLVSSCLAVMVIELPLLRRLVLPIVQSLAPIAPVAWIPFTI 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + +        +++  + + GT   +  ++IA     P ++ ++A +   +  R W ++ 
Sbjct: 142 AVIGIGG-QAAVFIVFMAVLGT---MSLSLIAALDGIPAEYLKIARNLGTSRMRMWWHVR 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP I P  +T    +  GAW A +  E+A         +GLG  I  + +  +   V++G
Sbjct: 198 LPAITPGAMTAIRMSFFGAWMAVLAGEMAGI------NSGLGYMIIMAQQMYNMKLVMIG 251

Query: 559 VLIMCCFVLALN 570
           +L +     A++
Sbjct: 252 ILAIGFIGFAID 263


>gi|228901325|ref|ZP_04065518.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 4222]
 gi|228908530|ref|ZP_04072370.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 200]
 gi|228921455|ref|ZP_04084778.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228965723|ref|ZP_04126803.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228793982|gb|EEM41505.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228838228|gb|EEM83546.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228851083|gb|EEM95897.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 200]
 gi|228858303|gb|EEN02770.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis IBL 4222]
          Length = 225

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       I      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKVSLIIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|228991603|ref|ZP_04151547.1| Glycine betaine transport system permease protein opuAB [Bacillus
           pseudomycoides DSM 12442]
 gi|228997708|ref|ZP_04157315.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock3-17]
 gi|229009063|ref|ZP_04166402.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock1-4]
 gi|228752233|gb|EEM01922.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock1-4]
 gi|228762052|gb|EEM10991.1| Glycine betaine transport system permease protein opuAB [Bacillus
           mycoides Rock3-17]
 gi|228768172|gb|EEM16791.1| Glycine betaine transport system permease protein opuAB [Bacillus
           pseudomycoides DSM 12442]
          Length = 253

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 107/235 (45%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF+++I +  ++ +  ++ ++    +  +   L+++       +T   +L++++IS++  
Sbjct: 25  AFLMIIIVCFLVWYTTRKISLVVFALIGLLFILNINY-WGQTMQTLALVLTSVIISIIVG 83

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA+++ R   +L P LD MQ++P   +L   + +F     G V G   + IFA+ 
Sbjct: 84  IPIGILASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGV---GVVPGIIASVIFAMP 140

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +P DL E + +F  +  QK + + +P +   ++  +  S+   
Sbjct: 141 -----PTIRFTDLGIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIMLS 195

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + ++         PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 196 LSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIVLDRI 243



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQS------IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            L +    ++  +   + W +      + + +    +   +        T+  V+  +II
Sbjct: 19  FLTLIPAFLMIIIVCFLVWYTTRKISLVVFALIGLLFILNINYWGQTMQTLALVLTSVII 78

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + I+ IP+GI        S  ++P    +   PA V+    ++      +   +   +  
Sbjct: 79  SIIVGIPIGILASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIFA 138

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  T  +       G    P D  E A++F  T  +    + LP      + G   +   
Sbjct: 139 MPPTIRF----TDLGIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIML 194

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 195 SLSMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIVLDRI 243


>gi|228939906|ref|ZP_04102483.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228972797|ref|ZP_04133396.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228979380|ref|ZP_04139716.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis Bt407]
 gi|229070264|ref|ZP_04203514.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus F65185]
 gi|229150997|ref|ZP_04279208.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1550]
 gi|229173436|ref|ZP_04300980.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus MM3]
 gi|229179071|ref|ZP_04306428.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 172560W]
 gi|228604439|gb|EEK61903.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 172560W]
 gi|228610130|gb|EEK67408.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus MM3]
 gi|228632557|gb|EEK89175.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1550]
 gi|228712828|gb|EEL64753.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus F65185]
 gi|228780384|gb|EEM28615.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis Bt407]
 gi|228787012|gb|EEM34992.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819837|gb|EEM65885.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 225

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|54024725|ref|YP_118967.1| putative transporter [Nocardia farcinica IFM 10152]
 gi|54016233|dbj|BAD57603.1| putative transporter [Nocardia farcinica IFM 10152]
          Length = 290

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 78/198 (39%), Gaps = 10/198 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T  +  Y++    +T +  VV  +IA++I   V + + +   +   + P        P  
Sbjct: 75  TVDNSAYLLENTWVTTYETVVGFVIAALIGEAVALVMIYSRSVERTMYPLILFAQVIPKI 134

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL +  +  +  +P + +++LM     + I+ + +AG  +   +  E+ S+     W
Sbjct: 135 AIAPLFIVWLG-FGTSPKILVAVLM---AFFPIVISGMAGLRSVDPEILELTSTMGAGNW 190

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +  +  P   P  ++G   A   A   ++V E            GLG  I ++     
Sbjct: 191 KTFVKVRFPASLPQLMSGLKIAATLAVTGAVVGEFVG------ANEGLGYVILQANGNID 244

Query: 552 FPEVVLGVLIMCCFVLAL 569
              +   ++IM    + L
Sbjct: 245 TAMLFAALIIMSLLGIIL 262



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L +    TT   +   VI+ L     A +   SR +   + P++   Q IP +   
Sbjct: 78  NSAYLLENTWVTTYETVVGFVIAALIGEAVALVMIYSRSVERTMYPLILFAQVIPKIAIA 137

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V+       K++ A L A F         +  S    L ++  ++ E++ +     
Sbjct: 138 PLFIVWLGFGTSPKILVAVLMAFF--------PIVISGMAGLRSVDPEILELTSTMGAGN 189

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+ F  +  P S+P L+  + ++        +A    VVG+ V    G+G  I  A    
Sbjct: 190 WKTFVKVRFPASLPQLMSGLKIA------ATLAVTGAVVGEFVGANEGLGYVILQANGNI 243

Query: 237 DLLAILYAMLTMLGVIFLY 255
           D   +  A++ M  +  + 
Sbjct: 244 DTAMLFAALIIMSLLGIIL 262


>gi|228927837|ref|ZP_04090885.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228934061|ref|ZP_04096902.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228946395|ref|ZP_04108716.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229091790|ref|ZP_04222989.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-42]
 gi|229122332|ref|ZP_04251546.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 95/8201]
 gi|229161659|ref|ZP_04289639.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus R309803]
 gi|228621904|gb|EEK78750.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus R309803]
 gi|228661181|gb|EEL16807.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus 95/8201]
 gi|228691572|gb|EEL45326.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus Rock3-42]
 gi|228813258|gb|EEM59558.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228825575|gb|EEM71367.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228831900|gb|EEM77489.1| Glycine betaine transport system permease protein opuAB [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 225

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKVSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|297202258|ref|ZP_06919655.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197710225|gb|EDY54259.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 266

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I+           L      T  R+L+   +     +    L      +   L P
Sbjct: 44  PAPSTILADGWDRAAAGELWPDVWATLKRVLAGYALGTATGYALGLLMGSLSLVRAALEP 103

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +LD +  +P L  L   +  F      +        I  + T+  + +  S   ++ +IP
Sbjct: 104 LLDALYVVPKLALLPVFLNMFGLGEGPQ--------IALVATTVFFFVWISTMSAVISIP 155

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +  + F  S WQ F ++ +P S+P ++    ++       +VASE I   D     
Sbjct: 156 SGHRDAGQVFGASPWQMFRHVLLPASLPSVLVGARIAAGVAVLVIVASEQIAATD----- 210

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            G+G  I  +        +   ++ +  +  L+ +L   L R +  W+ +
Sbjct: 211 -GLGHLIFDSRALFQNDVMFVGIVCVAVLGVLFSELVRVLGRLLTPWAPR 259



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 84/259 (32%), Gaps = 17/259 (6%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  R    +          L            +    V      I             + 
Sbjct: 5   RAHRRRRALELSLSTAVPLLLVLLWQLAAAQAWLDDRVYPAPSTILADGWDRAAAGELWP 64

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           DV         T+ RV+    + +     +G+ +G    + + ++P    L   P     
Sbjct: 65  DVW-------ATLKRVLAGYALGTATGYALGLLMGSLSLVRAALEPLLDALYVVPKLALL 117

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+ ++               L+     +++  + ++   + P+  ++    F  + W+ +
Sbjct: 118 PVFLNMFGLGEGPQ----IALVATTVFFFVWISTMSAVISIPSGHRDAGQVFGASPWQMF 173

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R+++LP   P  + GA  A G A    + SE  +       T GLG  I +S        
Sbjct: 174 RHVLLPASLPSVLVGARIAAGVAVLVIVASEQIA------ATDGLGHLIFDSRALFQNDV 227

Query: 555 VVLGVLIMCCFVLALNRFL 573
           + +G++ +    +  +  +
Sbjct: 228 MFVGIVCVAVLGVLFSELV 246


>gi|86750231|ref|YP_486727.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86573259|gb|ABD07816.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 284

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 78/226 (34%), Gaps = 10/226 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L +FW        + +       +V   T  +   ++    IT   ++    ++ I+ IP
Sbjct: 46  LLVFWEVATRVFGVPVYLFPPPSVVLQATIANWDLLLRESWITSVEILAGYAVSIIVGIP 105

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +   I   P  S  I P      A P     PL V    +      +   L+      + 
Sbjct: 106 LAFAIFRWPVFSKSIYPLLISSQAMPKVAVAPLFVIWFGFG----LVPKVLIAFLIAFFP 161

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ N + G +A   +   +A S  ++ +  +R I LP   P    G   +   A   ++V
Sbjct: 162 IVINTVMGLAAIEREKIYLAQSMGLSSFDTFRLIRLPNALPSIFAGLKISITLAVVGAVV 221

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E            GLG  +  +    + P +  G++ +    +  
Sbjct: 222 GEFVGGDG------GLGYQLMVANGSMNTPLLFAGLVALTVLGVFF 261



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 95/234 (40%), Gaps = 14/234 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV   +   + G+     P   V +     +   L + +  T++ +L+   +S++    
Sbjct: 46  LLVFWEVATRVFGVPVYLFPPPSVVLQATIANWDLLLRESWITSVEILAGYAVSIIVGIP 105

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A    +       + P+L   Q++P +      V++F      KV+ A L A F     
Sbjct: 106 LAFAIFRWPVFSKSIYPLLISSQAMPKVAVAPLFVIWFGFGLVPKVLIAFLIAFF----- 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  +    L  I R+   +++S  LS +  F  + +P ++P +   + +S++    
Sbjct: 161 ---PIVINTVMGLAAIEREKIYLAQSMGLSSFDTFRLIRLPNALPSIFAGLKISITLA-- 215

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            VV +   VVG+ V    G+G  + +A    +   +   ++ +  +   +  ++
Sbjct: 216 -VVGA---VVGEFVGGDGGLGYQLMVANGSMNTPLLFAGLVALTVLGVFFFWIV 265


>gi|229139423|ref|ZP_04267994.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST26]
 gi|229196958|ref|ZP_04323698.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1293]
 gi|228586515|gb|EEK44593.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus m1293]
 gi|228643970|gb|EEL00231.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BDRD-ST26]
          Length = 225

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       +      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKVSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|319795069|ref|YP_004156709.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315597532|gb|ADU38598.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 296

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 71/202 (35%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +MFRV     +A    IPVGI +G          P  +     P   + PL++     
Sbjct: 103 LASMFRVFSAFFLACATAIPVGIAMGMSRFWRGIFDPPLEFYRPLPPLAYLPLIIIWFGI 162

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   LL+       +     +G  +   +    A S   +  +  R++ILP   
Sbjct: 163 ----DELPKVLLIFLSCFAPLALAARSGMRSASQEQINAAYSMGASYMQVIRHVILPSAL 218

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   + +E+ +         GLG  +  ++       V++G++++ 
Sbjct: 219 PDILVGMRIAIGFGWTTLVAAEMVA------ANMGLGQMVLNASNFLRTDIVIMGIIVIG 272

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                 +  +      +  R L
Sbjct: 273 VVAYLFDLLM-----RWLERRL 289



 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   +  R+ SA  ++             SR    +  P L+  + +P L +L   +
Sbjct: 98  LWQHFLASMFRVFSAFFLACATAIPVGIAMGMSRFWRGIFDPPLEFYRPLPPLAYLPLII 157

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           EL  +  IF S    +  +    + +  ++    + S   S  Q  
Sbjct: 158 IWFGID--------ELPKVLLIFLSCFAPLALAARSGMRSASQEQINAAYSMGASYMQVI 209

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P ++  M +++  GW  +VA+EM+          G+G  +  A        
Sbjct: 210 RHVILPSALPDILVGMRIAIGFGWTTLVAAEMVAAN------MGLGQMVLNASNFLRTDI 263

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           ++  ++ +  V +L+D L   L R ++ W  +
Sbjct: 264 VIMGIIVIGVVAYLFDLLMRWLERRLVPWKGR 295


>gi|196041697|ref|ZP_03108988.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
 gi|196027466|gb|EDX66082.1| glycine betaine/L-proline ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
          Length = 278

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 105/235 (44%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +++I +  ++ +  ++ ++    +  +   L+++       +T   +L++++IS++  
Sbjct: 51  AVLMIILLCFLIWYTTRKVSLVIFTLIGLLFILNINY-WAQTMQTLALVLTSVIISIIVG 109

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA+++ R    L P LD MQ++P   +L   + +F     G V G   + IFA+ 
Sbjct: 110 IPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGV---GVVPGIIASVIFAMP 166

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +P DL E + +F  +  QK + + +P +   ++  +  S+   
Sbjct: 167 -----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLS 221

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + ++         PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 222 LSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 87/279 (31%), Gaps = 22/279 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ----LCSNQRVSYMLDIFWFCVVC 353
           +G    +F + L  + + L R    I   F +        + +   +  +  + W+    
Sbjct: 9   LGEWVDSFVASLYEHFEGLFRGFSYIIGGFVDLLTNFLIIIPAVLMIILLCFLIWYTTRK 68

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +      + +I+N   +   +  + L   ++   +++ I   I+             
Sbjct: 69  VSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA-------SQNER 121

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            S  ++P    +   PA V+    ++      +   +   +          +     G  
Sbjct: 122 FSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF----AMPPTIRFTDLGIR 177

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D  E A++F  T  +    + LP      + G   +   + +  + + +       
Sbjct: 178 QVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLSMVVTASLVG----- 232

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               GLG  +  S  + +        L +    + L+R 
Sbjct: 233 --APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269


>gi|296132521|ref|YP_003639768.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296031099|gb|ADG81867.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 251

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 22/243 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------------CIT 386
           +   ++      +V  + I + W  +  +++          +                ++
Sbjct: 2   KTKAIVTRITELLVALIFILLCWHLLALVLHSSILPTPYQALRTFVQVFTGRLWSHFYVS 61

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +RV   + +A +  +P+G+ +G    +     P   ++   P  V  P+V   +     
Sbjct: 62  AYRVFASLALALLAAVPLGLLLGRVEKLDRLFAPVVYIVYPIPKIVLLPIVFLILGLGDQ 121

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       ++     + IL      A   P        S     W+ +R++I P   P  
Sbjct: 122 SK----IFMIWLIVFFQILVTARDAAKGVPRQNIYSMRSLGAGRWQIFRHVIFPASLPKI 177

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +T    + G A       E  +       T GLG +I ++  +  + E+  G++ M    
Sbjct: 178 ITSLRISLGTAIAVLFFVESFA------TTEGLGYFIMDAWSRMDYAEMFAGIIGMSLLG 231

Query: 567 LAL 569
           L L
Sbjct: 232 LIL 234



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 16/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +L   ++ ++LH     T  + +   V +      L  +   +  R+ +++ ++LL
Sbjct: 17  LIFILLCWHLLALVLHSSILPTPYQALRTFVQVFT--GRLWSHFYVSAYRVFASLALALL 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L  +  +L  +  P++ I+  IP +  L    +        K        IF 
Sbjct: 75  AAVPLGLLLGRVEKLDRLFAPVVYIVYPIPKIVLLPIVFLILGLGDQSK--------IFM 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+    + +  +   +   +PR      RS     WQ F ++  P S+P ++ ++ +S+ 
Sbjct: 127 IWLIVFFQILVTARDAAKGVPRQNIYSMRSLGAGRWQIFRHVIFPASLPKIITSLRISLG 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   E            G+G +I  A    D   +   ++ M  +  +   ++
Sbjct: 187 TAIAVLFFVESFA------TTEGLGYFIMDAWSRMDYAEMFAGIIGMSLLGLILYAIV 238


>gi|221212592|ref|ZP_03585569.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD1]
 gi|221167691|gb|EEE00161.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD1]
          Length = 274

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 85/217 (39%), Gaps = 13/217 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++      +   +L +  S +  R      I      +  T    SR    ++ 
Sbjct: 54  LVSPADVLRTAWTQITSGALARALSASLAREACGFAIGATGGLLLGTALGLSRIATRIVG 113

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D  + I +  ++    V+F      KV+   LAA+  +        T      +  +
Sbjct: 114 PSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALLPV--------TAHTCDGIHAV 165

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR   +V+R+ R S  Q   ++ +P ++P +   + + +   W   + +E ++V  +   
Sbjct: 166 PRAYVDVARALRYSRLQLVRHVILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS--- 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             GIG+ +    ++  +  +L+ ++ +    +  + L
Sbjct: 223 --GIGNTLIDGSEQFRMDLVLFGIIVVGATGWALNAL 257



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 12/259 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                T+   R H P+    +     ++    I    ++    +      +       T 
Sbjct: 11  DAQRATVLTRRRHAPDWRGLVLPLAALAIWWAIASAHLINSGLLVSPADVLRTAWTQITS 70

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             +   +     ++ R      I +   + +G  +G     +  + P            +
Sbjct: 71  GALARAL---SASLAREACGFAIGATGGLLLGTALGLSRIATRIVGPSFDTFKQISLFAW 127

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+        +   ++LS          +  +   G  A P  + +VA +   +  + 
Sbjct: 128 IPLISVWFGLGDVAKVVFLS----LAALLPVTAHTCDGIHAVPRAYVDVARALRYSRLQL 183

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R++ILP   P   TG       +W A++ +E        +  +G+G  + + +E+    
Sbjct: 184 VRHVILPAALPSIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMD 238

Query: 554 EVVLGVLIMCCFVLALNRF 572
            V+ G++++     ALN  
Sbjct: 239 LVLFGIIVVGATGWALNAL 257


>gi|319441515|ref|ZP_07990671.1| ABC transporter, permease protein [Corynebacterium variabile DSM
           44702]
          Length = 291

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 96/240 (40%), Gaps = 16/240 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           + D   + ++I +  ++                  +   V   PQ A  T  ++L A++ 
Sbjct: 47  VLDTPVYYVMIIVFALIAWAAVSWKGAVFTALGFYLVRAVDEWPQ-AMETLSQVLVAVLF 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++        AAKS  +  ++ P+LD MQ++P L +L   +V F     G   G     
Sbjct: 106 AVVLAVPLGIWAAKSETVSKIVKPVLDFMQAMPALAYLVPIIVIFG---IGVTPGMIATL 162

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +     +         +  + ++  E  R+F  +G    + + +P ++P ++  +  
Sbjct: 163 IFCMPPGVRF-----TELGIRQVDKETVEAGRAFGATGTHILFRIQLPLALPTIMAGINQ 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      VV + M          PG+G+ I  AI   ++   + A + ++ +    D++
Sbjct: 218 IIMLALSMVVLAGMA-------GAPGLGADITSAISSINVPLGVNAGVAVVILAVFLDRV 270



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 96/274 (35%), Gaps = 15/274 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G    +F    ++    L   +G +     + F  +        M+ +F       V  
Sbjct: 11  LGDWISDFIDWFTDVFGWLLDFIGTVLDGLHDAFHWVLDTPVYYVMIIVFALIAWAAV-- 68

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             +W+   +    F     +        T+ +V+V ++ A ++ +P+GIW      +S  
Sbjct: 69  --SWKGAVFTALGFYLVRAVDEWPQAMETLSQVLVAVLFAVVLAVPLGIWAAKSETVSKI 126

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    + A PA  +    V  +  + +     +   +IF     + F    G      
Sbjct: 127 VKPVLDFMQAMPALAYL---VPIIVIFGIGVTPGMIATLIFCMPPGVRF-TELGIRQVDK 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E   +F  TG      I LP   P  + G       A +  +++ +A          
Sbjct: 183 ETVEAGRAFGATGTHILFRIQLPLALPTIMAGINQIIMLALSMVVLAGMAG-------AP 235

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           GLGA I  +    + P  V   + +    + L+R
Sbjct: 236 GLGADITSAISSINVPLGVNAGVAVVILAVFLDR 269


>gi|295106725|emb|CBL04268.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Gordonibacter pamelaeae 7-10-1-b]
          Length = 308

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 76/184 (41%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +V+       + + +GI  G+ P + +   P A +LA  P  VF P ++  +  + 
Sbjct: 120 SVTLLVMGYAGGLALGVVLGIVCGWIPRLRAMFFPIANVLAPIPPTVFAPYLIVLLPTFR 179

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ G  W    N++   S+      + A +  +  +     IILP + P 
Sbjct: 180 T----ASCFIILLGVFWPQFLNMVVRTSSLDAQLLDNARTLGVRNFTMITRIILPYVLPE 235

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   A+     +E+         ++G+G +I+ +    ++  VV G+++    
Sbjct: 236 VLKGLRVSLTTAFLMLTFAEMLG------ASSGIGYFISNANNYANYTNVVAGIIVCGVV 289

Query: 566 VLAL 569
           V  L
Sbjct: 290 VTVL 293



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 82/248 (33%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A  +V  +    L       VP               +      +   ++      L 
Sbjct: 74  VWALFIVWDVCATKLDIAPTVIVPAPEAVFNVFFAQADVIGADIVSSVTLLVMGYAGGLA 133

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +     RL  +  PI +++  IP   F  + +V               A+ F 
Sbjct: 134 LGVVLGIVCGWIPRLRAMFFPIANVLAPIPPTVFAPYLIVLL--------PTFRTASCFI 185

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     W    +M     ++   L + +R+  +  +     + +P+ +P ++  + +S++
Sbjct: 186 ILLGVFWPQFLNMVVRTSSLDAQLLDNARTLGVRNFTMITRIILPYVLPEVLKGLRVSLT 245

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +  +  +EM+          GIG +I+ A    +   ++  ++    V+ +       
Sbjct: 246 TAFLMLTFAEMLGASS------GIGYFISNANNYANYTNVVAGIIVCGVVVTVLSFATAW 299

Query: 259 LFRPMIVW 266
           + R    W
Sbjct: 300 VQRRFTTW 307


>gi|115372274|ref|ZP_01459584.1| ABC transporter permease protein [Stigmatella aurantiaca DW4/3-1]
 gi|310817360|ref|YP_003949718.1| aliphatic sulfonates ABC transporter permease [Stigmatella
           aurantiaca DW4/3-1]
 gi|115370739|gb|EAU69664.1| ABC transporter permease protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390432|gb|ADO67891.1| aliphatic sulfonates ABC transporter, permease protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 253

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 92/226 (40%), Gaps = 14/226 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L        P  +   +   +    L     R+  R+  A V+S+          A+   
Sbjct: 26  LWSPHLFPGPVTVARSLSHLVASGQLGTAVLRSLGRLGRAYVVSVGIGVPLGLAIARLAF 85

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               + P++  +Q++P + +L   +++F           + A +F +    V  +  ++ 
Sbjct: 86  FREAVKPVVMGLQALPSICWLPLALLWFGLN--------DSAILFVVVMGSVLAIAIAVE 137

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + +I   L  V+ +    G +  + + +P ++PG+V  + +  S  W  ++A E++ V
Sbjct: 138 DGVRSIDPQLIRVAHTLGARGARFAFGVLLPAALPGIVTGLKLGWSFAWRALLAGELLFV 197

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +  L        L  +  D+  ++  ML ++ +  L D+++F+
Sbjct: 198 SGGLGQLL------TLGRELMDVPQVMAVMLAIIALGILVDRVVFQ 237



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 10/202 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+    +++  I +P+G+ I         ++P    L A P+  + PL +       
Sbjct: 58  SLGRLGRAYVVSVGIGVPLGLAIARLAFFREAVKPVVMGLQALPSICWLPLALLWFGL-- 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G+   I   V  G  +       VA +    G R+   ++LP   P 
Sbjct: 116 --NDSAILFVVVMGSVLAIAIAVEDGVRSIDPQLIRVAHTLGARGARFAFGVLLPAALPG 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VTG       AW A +  E+        +            E    P+V+  +L +   
Sbjct: 174 IVTGLKLGWSFAWRALLAGELLFVSGGLGQLL------TLGRELMDVPQVMAVMLAIIAL 227

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
            + ++R ++  +     R   L
Sbjct: 228 GILVDRVVFQTVETRVRRRWGL 249


>gi|253690108|ref|YP_003019298.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251756686|gb|ACT14762.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 254

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 82/248 (33%), Gaps = 11/248 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
            +++           +L +FW   V    +   +    +  +   F       +      
Sbjct: 2   RQHWTSKLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVDTLSYMFQSFADASMRTDIGA 61

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R +     A++I +P+G+ +G    I   ++       + P++   PL +       
Sbjct: 62  TLYRTLAAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITD 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N     +   +      ILFN   G           A    I+ W  ++ I+L      
Sbjct: 122 ANKIAISAFAAVLV----ILFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T    A    IV+E+          TGLG  I ++ +  +  ++   +LI    
Sbjct: 178 TFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQVFNIRDMYASILITGAL 232

Query: 566 VLALNRFL 573
              LN   
Sbjct: 233 GYLLNVLF 240



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 95/259 (36%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P +  +L F+     ++           P D +  +  +    S+      T  R L
Sbjct: 8   KLLPAVGPILLFLFWQLAVSAKWLNPILLPSPVDTLSYMFQSFADASMRTDIGATLYRTL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A   + L       +   + ++   L  ++D  +S P    +   ++ F      K+  
Sbjct: 68  AAFGFAALIGVPLGVILGSNEKIYRSLEFLIDFFRSTPSSALIPLFLLIFGITDANKIAI 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  AA+  I         F+    + N  +     ++   +S W  F  + +  S+    
Sbjct: 128 SAFAAVLVI--------LFNSAYGVMNAKKTRLMAAQVMGISRWHIFKDIMLLESLAQTF 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +T     G+G  I  A +  ++  +  ++L    + +
Sbjct: 180 VGLRTGVSMALVIVIVAEMFIGSET-----GLGHRIIDAQQVFNIRDMYASILITGALGY 234

Query: 254 LYDQLLF---RPMIVWSNK 269
           L + L     + ++ WS K
Sbjct: 235 LLNVLFLIVEKRIVHWSGK 253


>gi|163859331|ref|YP_001633629.1| ABC transporter permease protein [Bordetella petrii DSM 12804]
 gi|163263059|emb|CAP45362.1| ABC transporter permease protein [Bordetella petrii]
          Length = 291

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   L+                           L    LP  A ++   +L   V  + 
Sbjct: 48  LLVLALLWEAAARYTGNDLLLPGAWQTAQAFVQGLADGELPSRALQSLQVLLKGYVAGIA 107

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV  TLA  +R    VL  +  +   +P +  L   +++F           E + +F 
Sbjct: 108 LAFVLTTLAVSTRLGRDVLSTLTAMFNPLPAIALLPLALLWFGLG--------EGSLVFV 159

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  ++Y     +P  L    R++ L G +  + + VP ++P +V  + +  +
Sbjct: 160 LVHSVLWALALNIYAGFLAVPETLRMAGRNYGLKGPRYVFGILVPAALPAIVAGLRIGWA 219

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +    + L+F 
Sbjct: 220 FAWRTLIAAELVFGASS--GEGGLGWYIFQNRNELYTDRVFAGLAAVVIIGLAVENLVFN 277

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 278 TLERLTVR 285



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N+ AG  A P   +    ++ + G R+   I++P   P  V G  
Sbjct: 156 LVFVLVHSVLWALALNIYAGFLAVPETLRMAGRNYGLKGPRYVFGILVPAALPAIVAGLR 215

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    LA+  
Sbjct: 216 IGWAFAWRTLIAAELVFGASSGEG--GLGWYIFQNRNELYTDRVFAGLAAVVIIGLAVEN 273

Query: 572 FLWHPLYLYGTRC 584
            +++ L     R 
Sbjct: 274 LVFNTLERLTVRR 286


>gi|325290648|ref|YP_004266829.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966049|gb|ADY56828.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 257

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 17/217 (7%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + I W  + ++  H    D+L       I++ R ++    A +I IP+G+ IG+    S 
Sbjct: 41  VLITWFQLIFLGEHELIPDIL-------ISLQRALLGFGFALLIGIPLGLLIGYFKSFSD 93

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
              P   +    PA   FP+ +        +       ++ + + W IL N I+G     
Sbjct: 94  FFSPLVHICRQIPALALFPVFILFFGIEETSK----VTIVFWVSVWDILLNTISGVRHTD 149

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               + A S      R    ++LPG  P  +TG     G A  A + +E+          
Sbjct: 150 LLLIKAARSMGADTERILSSVVLPGAVPSLMTGLRLGSGSAIKALVAAEMIG------AK 203

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG  +  S       ++ + +L +    + LN  L
Sbjct: 204 AGLGFQVINSQYNFQISKMYVSILTIALIGIILNFIL 240



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 14/206 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L  H L      +  R L     +LL       L    +       P++ I + IP L
Sbjct: 49  IFLGEHELIPDILISLQRALLGFGFALLIGIPLGLLIGYFKSFSDFFSPLVHICRQIPAL 108

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +++F           E + +  +F   VW++  +    + +    L + +RS  
Sbjct: 109 ALFPVFILFFGIE--------ETSKVTIVFWVSVWDILLNTISGVRHTDLLLIKAARSMG 160

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               +    + +P ++P L+  + +        +VA+EMI          G+G  +  + 
Sbjct: 161 ADTERILSSVVLPGAVPSLMTGLRLGSGSAIKALVAAEMIGAKA------GLGFQVINSQ 214

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
               +  +  ++LT+  +  + + +L
Sbjct: 215 YNFQISKMYVSILTIALIGIILNFIL 240


>gi|146341285|ref|YP_001206333.1| putative alkanesulfonate ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146194091|emb|CAL78110.1| putative alkanesulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. ORS278]
          Length = 337

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 89/277 (32%), Gaps = 17/277 (6%)

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
           + +T  L    +         S    +L R    +R   P           +   L ++ 
Sbjct: 53  WSRTTDLAVAAFVIAALVLVSSIAALRLGRAGAALRRRSP-------WLLALGVFLTLWE 105

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                   + + +      +      D+  ++     ++   +    I + I    G+ I
Sbjct: 106 LATAKFAWLPLPFFPPPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFVTGVSI 165

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+   I   + P  + +   PA  + P+                + L+   T + +    
Sbjct: 166 GWSTRIGYWVHPVLRFIGPVPATAWLPIAFFTFPTSWS----ASTFLIALATGFPVTVLT 221

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +G ++ P  + +VA +     W     + +P   P+   G     G ++   +++E+  
Sbjct: 222 WSGVASVPTAYYDVARTLGARPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIG 281

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    GLG Y+  +    ++  +   +L+M   
Sbjct: 282 ------VKAGLGWYLQWAQGWAAYANMYAALLVMSLL 312



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 14/249 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR  P +  L  F+ +  +       +     P     I   T D+  L      +    
Sbjct: 88  RRRSPWLLALGVFLTLWELATAKFAWLPLPFFPPPQAIIEVYTDDLPKLLDSVVASIKLQ 147

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I     FV       S R+G  + P+L  +  +P   +L      F         
Sbjct: 148 LGGYAIGAAIGFVTGVSIGWSTRIGYWVHPVLRFIGPVPATAWLPIAFFTF--------P 199

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +  A+ F I  +  + +T   +  + ++P    +V+R+     W     + +P ++P +
Sbjct: 200 TSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLGARPWFLVLKVAIPAALPHV 259

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M +   +  +V +EMI V        G+G Y+  A        +  A+L M  + 
Sbjct: 260 FVGLFMGLGASFAVLVIAEMIGVKA------GLGWYLQWAQGWAAYANMYAALLVMSLLC 313

Query: 253 FLYDQLLFR 261
                LLF+
Sbjct: 314 SGAITLLFK 322


>gi|89093410|ref|ZP_01166359.1| putative taurine uptake ABC transporter permease protein
           [Oceanospirillum sp. MED92]
 gi|89082389|gb|EAR61612.1| putative taurine uptake ABC transporter permease protein
           [Oceanospirillum sp. MED92]
          Length = 308

 Score = 96.9 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 103/255 (40%), Gaps = 22/255 (8%)

Query: 23  LAFVLVIGIINILLHGI-QETTVPRDIV----DIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++ +L+  +   L          P D+V    ++        +L ++   +  R+ SA  
Sbjct: 68  ISLLLLWAVSTELGWIKPLFLPSPFDVVARFWEVATEGFANATLLEHTGWSMFRVFSAFA 127

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++L           +R    +  PI++  + +P L +L   +++            E++
Sbjct: 128 LAMLTAIPIGIFMGVNRIARGLFDPIIEFYRPLPPLAYLPLVIIWLGIG--------EVS 179

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  I+ +    M  S    + ++  +    + S   S WQ   ++ +  ++P ++  M 
Sbjct: 180 KVVLIYLAIFAPMALSARAGVKSVAIEQIHAAYSMGASRWQVTRHIIMKSALPEILTGMR 239

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +  GW  +VA+EM+          G+G  +  A +      ++  ++ +  + +L+D 
Sbjct: 240 IGIGFGWTTLVAAEMVA------AQAGLGFMVLNAAEFLVTDVVIMGIVVIGIIAYLFDL 293

Query: 258 L---LFRPMIVWSNK 269
           L   L R ++ W  K
Sbjct: 294 LMRWLERKLVPWKGK 308



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 34/295 (11%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-- 367
           +  V K  + L   +  F    ++                 VV  +++ + W     +  
Sbjct: 23  AKPVMKPLKPLQRFKALFAAGPVKPGDAFGAPGQGKSTMISVVTSISLLLLWAVSTELGW 82

Query: 368 ---VNHFTYQDVLYVIWLGCI--------------TMFRVVVLIIIASIIWIPVGIWIGF 410
              +   +  DV+   W                  +MFRV     +A +  IP+GI++G 
Sbjct: 83  IKPLFLPSPFDVVARFWEVATEGFANATLLEHTGWSMFRVFSAFALAMLTAIPIGIFMGV 142

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                    P  +     P   + PLV+  +    ++      +L+       +  +  A
Sbjct: 143 NRIARGLFDPIIEFYRPLPPLAYLPLVIIWLGIGEVSK----VVLIYLAIFAPMALSARA 198

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  +   +    A S   + W+  R+II+    P  +TG     G  W   + +E+ +  
Sbjct: 199 GVKSVAIEQIHAAYSMGASRWQVTRHIIMKSALPEILTGMRIGIGFGWTTLVAAEMVA-- 256

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                  GLG  +  + E      V++G++++       +  +      +  R L
Sbjct: 257 ----AQAGLGFMVLNAAEFLVTDVVIMGIVVIGIIAYLFDLLM-----RWLERKL 302


>gi|311106606|ref|YP_003979459.1| binding-protein-dependent transporter inner membrane component
           family protein 39 [Achromobacter xylosoxidans A8]
 gi|310761295|gb|ADP16744.1| binding-protein-dependent transport system inner membrane component
           family protein 39 [Achromobacter xylosoxidans A8]
          Length = 257

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 97/252 (38%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+ F  +  +L  + +  +    L       VP  +V+ +   L   S  Q    T  R
Sbjct: 10  ARKHFAGVLGVLFILALWQLAAFALPDFLMPGVP-AVVERLFEDLGKQSFHQSLLGTLGR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++          
Sbjct: 69  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 122 -FGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPE 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 235

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 236 AALIDQFVLENL 247



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 22/243 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI-------------WLGCITMFRVVVLI 394
           +  V+  + I   WQ   + +  F    V  V+                  T+ R+    
Sbjct: 14  FAGVLGVLFILALWQLAAFALPDFLMPGVPAVVERLFEDLGKQSFHQSLLGTLGRLGAGY 73

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A    I  G+           ++    +L + P+  + PL +  + +     N  + +
Sbjct: 74  GLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTPIIV 129

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++     +    +V+    +        A     T W   + + LP + P  +TGA  A 
Sbjct: 130 VVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAF 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           G AW A I +E+           GLG  +A S E      V+  +L++      +++F+ 
Sbjct: 190 GNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVL 244

Query: 575 HPL 577
             L
Sbjct: 245 ENL 247


>gi|18309540|ref|NP_561474.1| glycine betaine/carnitine/choline ABC transporter [Clostridium
           perfringens str. 13]
 gi|18144217|dbj|BAB80264.1| probable glycine betaine/carnitine/choline ABC transporter
           [Clostridium perfringens str. 13]
          Length = 517

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   ++  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPILGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPILGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|299532970|ref|ZP_07046357.1| probable ABC transporter permease protein [Comamonas testosteroni
           S44]
 gi|298719194|gb|EFI60164.1| probable ABC transporter permease protein [Comamonas testosteroni
           S44]
          Length = 256

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 79/245 (32%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   +  +   +  ++ + W  +  G+ +        + + H  Y+    +      T +
Sbjct: 4   QKTAERWAPWLLLLLIVLLWQIICSGLGVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYW 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    +A ++ + +G  IG      +   P      A P   F P++V          
Sbjct: 64  VTMAGFALAIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGAG-- 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L     + + I+ N+  G +    + ++V        W     + LP   PY+  
Sbjct: 122 --PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYG 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  + VSE+           G+G  +  +           G++++    + 
Sbjct: 180 SLKVAITLAFVGTTVSEM------TAANEGIGYLLVSAGSSMQMGLAFAGLIVVGAMAMV 233

Query: 569 LNRFL 573
           +    
Sbjct: 234 MYELF 238



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 14/222 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+ E   P        +     ++  +A RT    ++   ++++   +   L   SR   
Sbjct: 31  GVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYWVTMAGFALAIVVGVLLGFLIGSSRLAY 90

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P++    ++P   F+   VV+F              AI   F    + +  ++   
Sbjct: 91  AAFYPLMTAFNALPKAAFVPILVVWFGIGAGP--------AILTAFLISFFPIMVNIATG 142

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +  +LE+V R      W     +G+P S+P    ++ ++++  +     SEM    +
Sbjct: 143 LATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYGSLKVAITLAFVGTTVSEMTAANE 202

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 GIG  +  A     +      ++ +  +  +  +L 
Sbjct: 203 ------GIGYLLVSAGSSMQMGLAFAGLIVVGAMAMVMYELF 238


>gi|22538264|ref|NP_689115.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus agalactiae 2603V/R]
 gi|25012124|ref|NP_736519.1| hypothetical protein gbs2089 [Streptococcus agalactiae NEM316]
 gi|76799099|ref|ZP_00781288.1| choline transporter [Streptococcus agalactiae 18RS21]
 gi|77413216|ref|ZP_00789414.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|22535178|gb|AAN00988.1|AE014288_6 amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|24413668|emb|CAD47748.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585545|gb|EAO62114.1| choline transporter [Streptococcus agalactiae 18RS21]
 gi|77160756|gb|EAO71869.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
          Length = 504

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 73/178 (41%), Gaps = 21/178 (11%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               + +  +++  V++ I  I Q+IP L  L   + +             + A+ A+  
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG--------TVPAVVALII 90

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  +    L  I  +L E + +F ++ W++     +  SMP ++  +        
Sbjct: 91  YALFPILQNTVTVLMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIR------- 143

Query: 205 FFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               AS MI+   T   +I   G+GS+I L I   +   IL   ++   +  ++  L+
Sbjct: 144 ---TASVMIIGTATLASLIGAGGLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLI 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI I     IS  +     +    P+     L +  +        +   + +I    +
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG----TVPAVVALIIYALF 94

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N +        +  E A++F +T W   +   L    P  ++G  TA       + 
Sbjct: 95  PILQNTVTVLMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTAT 154

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +   G       GLG++I    ++ +   +++G +      +  +  +
Sbjct: 155 LASLIGAG-------GLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLI 198


>gi|89898073|ref|YP_515183.1| ABC transporter [Chlamydophila felis Fe/C-56]
 gi|89331445|dbj|BAE81038.1| ABC transporter [Chlamydophila felis Fe/C-56]
          Length = 622

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 16/218 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I      + D+  +  Y+  T   +L    ++LL +     L    +    +L P
Sbjct: 46  PPPSKIASHFSDSFDL--ILSYSWHTLRGILGGFFLALLLSIGLVILMLAYKPAKDLLNP 103

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++Q  P+       V++F             A I     +  + +T ++YQ + + P
Sbjct: 104 LFILVQCTPMFTLAPLIVLWFGWGL--------SAVIVPTALTVFFPLTITIYQGITSTP 155

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  E     + +  Q F  L +P ++P +   + ++M    F  +A E +         
Sbjct: 156 EEFLEQFILHQATKRQTFIKLRLPHALPHIFSGLKIAMGSAGFAAIAGEWVA------SQ 209

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            G+G  I  + +  D+      +  +  + F+  Q + 
Sbjct: 210 SGLGILILESRRNYDMEMTFAGLFALTTLTFILFQGVL 247



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 10/168 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I + I +         + P   L+   P     PL+V    +      +  +L + F   
Sbjct: 85  IGLVILMLAYKPAKDLLNPLFILVQCTPMFTLAPLIVLWFGWGLSAVIVPTALTVFF--- 141

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +   +  G ++ P +F E       T  + +  + LP   P+  +G   A G A  A+
Sbjct: 142 -PLTITIYQGITSTPEEFLEQFILHQATKRQTFIKLRLPHALPHIFSGLKIAMGSAGFAA 200

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I  E  +        +GLG  I ES           G+  +      L
Sbjct: 201 IAGEWVA------SQSGLGILILESRRNYDMEMTFAGLFALTTLTFIL 242


>gi|167590155|ref|ZP_02382543.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 295

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 100/258 (38%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLP 62
           P  ++RR+    +    L+A VL+            +  VP      V     +    L 
Sbjct: 33  PVPLARRVLDAGWFRRALIALVLIGAWELTARLVANDLLVPTFGATFVAFVQGIASGELL 92

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    + ++  F   ++A  +R    +L  +  +   +P +  L   +++
Sbjct: 93  VKTGISLSVLLRGYALGVVLAFALTSVAVSTRIGRDLLSMLTSMFNPLPSIALLPIALLW 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  + +W +  +MY     +P  L    R++ L+G ++   
Sbjct: 153 FGLGTG--------SLLFVLVHAVLWPLALNMYTGFLGVPATLRMAGRNYGLTGLRQVAL 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++          G+G YI     E     + 
Sbjct: 205 ILVPAALPSILAGLRVGWAFAWRTLIAAELVFGASA--GQGGLGWYIFQNRNELYTDRVF 262

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 263 AGLAAVIVIGLLVEHLVF 280



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 86/282 (30%), Gaps = 21/282 (7%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVNHFTY--- 373
           R    +    P +  +         +LD  WF   +  + +  AW+    +V +      
Sbjct: 15  RAEYELPLQAPLDVERAVPVPLARRVLDAGWFRRALIALVLIGAWELTARLVANDLLVPT 74

Query: 374 -----------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                           ++    I++  ++    +  ++   +             +    
Sbjct: 75  FGATFVAFVQGIASGELLVKTGISLSVLLRGYALGVVLAFALTSVAVSTRIGRDLLSMLT 134

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +    P+    P+ +        +    L  +++    W +  N+  G    P   +  
Sbjct: 135 SMFNPLPSIALLPIALLWFGLGTGS----LLFVLVHAVLWPLALNMYTGFLGVPATLRMA 190

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++ +TG R    I++P   P  + G       AW   I +E+           GLG Y
Sbjct: 191 GRNYGLTGLRQVALILVPAALPSILAGLRVGWAFAWRTLIAAELVFGA--SAGQGGLGWY 248

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           I ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 249 IFQNRNELYTDRVFAGLAAVIVIGLLVEHLVFDTLERLTVRR 290


>gi|107026693|ref|YP_624204.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116692117|ref|YP_837650.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105896067|gb|ABF79231.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116650117|gb|ABK10757.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 280

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 14/198 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +VD +        L ++   +  R+L       L           SR L   ++
Sbjct: 60  LPPPERVVDTLAELASSGDLARHTLISLQRVLVGFAAGTLLGVSIGVALGLSRTLEAYVL 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K +         I  + +  +T S  Q     
Sbjct: 120 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------LIAHAALVPVTLSTLQGFRQT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 172 PPALDEVARGFGYTRRQRIVHVVLPAAIPTLATGVRLAFTKSWLALVVVELVASSE---- 227

Query: 222 LPGIGSYIALAIKEQDLL 239
             G+G  I    +   L 
Sbjct: 228 --GLGYLIVYGRQLFQLD 243



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 16/254 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSI----GYIVNHFTYQDVLYV 379
                 L+  + Q   ++L    F +    +    IA Q +      +           +
Sbjct: 20  PRRSAALKRLAWQLAPWVLPALLFALWSVGSARGWIAPQILPPPERVVDTLAELASSGDL 79

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                I++ RV+V     +++ + +G+ +G    + + + P    L   P   + P ++ 
Sbjct: 80  ARHTLISLQRVLVGFAAGTLLGVSIGVALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLL 139

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V            LL+       +  + + G    P    EVA  F  T  +   +++L
Sbjct: 140 LVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPPALDEVARGFGYTRRQRIVHVVL 195

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P   TG   A   +W A +V E+ +       + GLG  I    +      V+  V
Sbjct: 196 PAAIPTLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAV 249

Query: 560 LIMCCFVLALNRFL 573
           +++    L +NR L
Sbjct: 250 VVVGAVGLLINRAL 263


>gi|327400486|ref|YP_004341325.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327315994|gb|AEA46610.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 246

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 81/234 (34%), Gaps = 23/234 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------------GCITMFRVVVLII 395
           W  VV G  + I W  + Y V          V                 I+  R +  I+
Sbjct: 9   WGYVVAGAVLFIIWHVLAYFVKSPALPYPSTVFAAFIAQLGEGLAIHMAISACRAIYSIL 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+G+       I   I PF  LL   P  V  PL++       ++  + + ++
Sbjct: 69  LALSLAIPIGLLC-HERKIDRFIAPFLYLLYPIPHIVLLPLIILLFGIGDVSKVILIGMI 127

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + F     IL      A      +     S        +R+++ P   P  +T    + G
Sbjct: 128 VFF----QILVTTRDAARNIDEYYVYSLLSLGADKKDIYRHVVFPACLPKILTALRISVG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A      +E  +       TTGLG  I  +  +  +  +  G++ M     +L
Sbjct: 184 TAIAVLFFAESFA------TTTGLGYLIMTAWSRADYVSLYAGIVAMALLGFSL 231



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 90/249 (36%), Gaps = 19/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           ++A  ++  I ++L + ++   +P            +   L  + + +  R + +++++L
Sbjct: 12  VVAGAVLFIIWHVLAYFVKSPALPYPSTVFAAFIAQLGEGLAIHMAISACRAIYSILLAL 71

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L    R++   + P L ++  IP +  L   ++ F      KVI   +   F
Sbjct: 72  SLAIPIGLLC-HERKIDRFIAPFLYLLYPIPHIVLLPLIILLFGIGDVSKVILIGMIVFF 130

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +           +  NI         S        + ++  P  +P ++  + +S+
Sbjct: 131 QILVT--------TRDAARNIDEYYVYSLLSLGADKKDIYRHVVFPACLPKILTALRISV 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQ 257
                 +  +E            G+G  I  A    D +++   ++ M  + F   +  +
Sbjct: 183 GTAIAVLFFAESFA------TTTGLGYLIMTAWSRADYVSLYAGIVAMALLGFSLYMALE 236

Query: 258 LLFRPMIVW 266
           ++ R +  W
Sbjct: 237 VIERRLCRW 245


>gi|298290236|ref|YP_003692175.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296926747|gb|ADH87556.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 284

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+    +T++R +    I ++I IP+GI +     +     P   +    P   F P+
Sbjct: 82  GTVLVDLGLTLYRALAGFAIGAVIGIPLGILMARSALVRWFFDPLVSIGFPMPKIAFLPI 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +     Y  +      +++ F   + I+    AG S+        A SF          
Sbjct: 142 FILWFDIYDTSK----IIMVAFSCFFPIVAATYAGCSSLDKWPIWSARSFGAKERDLLWE 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  +TG   A       +IV+E+   G       G+G  +  +        V 
Sbjct: 198 VYLPMAMPQIITGLQVALPVGMITTIVTEMLMGG------RGVGGAMIMAGRFADSVGVF 251

Query: 557 LGVLIMCCFVLAL 569
            G++ +      +
Sbjct: 252 AGIVQIIILGFVV 264



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 90/220 (40%), Gaps = 17/220 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L   ++      T  R L+   I  +       L A+S  +     P++ I   +P + 
Sbjct: 78  DLIAGTVLVDLGLTLYRALAGFAIGAVIGIPLGILMARSALVRWFFDPLVSIGFPMPKIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           FL   +++F      K+I    +  F         +  + Y    ++ +     +RSF  
Sbjct: 138 FLPIFILWFDIYDTSKIIMVAFSCFF--------PIVAATYAGCSSLDKWPIWSARSFGA 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
                 W + +P +MP ++  + +++  G    + +EM++ G       G+G  + +A +
Sbjct: 190 KERDLLWEVYLPMAMPQIITGLQVALPVGMITTIVTEMLMGG------RGVGGAMIMAGR 243

Query: 235 EQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271
             D + +   ++ ++ + F+  +   ++ R ++VW  + R
Sbjct: 244 FADSVGVFAGIVQIIILGFVVVKSLEIVRRRILVWHPESR 283


>gi|222529175|ref|YP_002573057.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor bescii DSM 6725]
 gi|222456022|gb|ACM60284.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor bescii DSM 6725]
          Length = 264

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 95/221 (42%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + +     LD + L      TT RM+   +ISLL   +      K   L   L P
Sbjct: 45  PSPVSVAETFIRLLDNNVLFIAIWATTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRP 104

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q++P + +L F ++++          +E A IF      ++++T ++   + N+ 
Sbjct: 105 LILGFQTLPSVCWLPFAILWYGL--------SEKAIIFVTAIGSLFSITLAVESGIKNVN 156

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +++   +G + +  + +P S+P ++  M    S  +  ++A EM+         
Sbjct: 157 PLYIKAAKTMGATGLRLYLNVIIPASLPYVISGMKQGWSFAFRALMAGEML------FAT 210

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+  +    + ++ +F P+
Sbjct: 211 KGLGQVLMVGRDLADMSQVISVMIVTIVFGLVVEKAIFGPL 251



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T  R+V+  +I+ +  I +G+ I     +   ++P        P+  + P  +
Sbjct: 63  LFIAIWATTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRPLILGFQTLPSVCWLPFAI 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  +   G+ + I   V +G       + + A +   TG R +  +I
Sbjct: 123 LWYGLSEK----AIIFVTAIGSLFSITLAVESGIKNVNPLYIKAAKTMGATGLRLYLNVI 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY ++G       A+ A +  E+         T GLG  +    +     +V+  
Sbjct: 179 IPASLPYVISGMKQGWSFAFRALMAGEML------FATKGLGQVLMVGRDLADMSQVISV 232

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +++   F L + + ++ PL
Sbjct: 233 MIVTIVFGLVVEKAIFGPL 251


>gi|226946473|ref|YP_002801546.1| Binding-protein-dependent transport systems inner membrane
           component [Azotobacter vinelandii DJ]
 gi|226721400|gb|ACO80571.1| Binding-protein-dependent transport systems inner membrane
           component [Azotobacter vinelandii DJ]
          Length = 259

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 69/181 (38%), Gaps = 10/181 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      +++R +  +++A +  + +G+ +G    + + + P  QL     A   FP+ +
Sbjct: 57  LFKHLEASLYRSLAGLLLAIVSGVGLGLLMGGFRRLEALVDPLLQLFRQTSALALFPVFI 116

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  L+       ++ + + W IL + I+G         + A S   +    +  ++
Sbjct: 117 LFFGIGELSK----VAIIFWASFWPILLSTISGVKQVDRLLIDSARSMGASRAFLFVKVV 172

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   A      A + +E+          +GLG     S E    P +  G
Sbjct: 173 LPAAAPSIFTGVRLAGAYCVTALVAAEMIG------AHSGLGFLTLNSQEVFQVPSMYAG 226

Query: 559 V 559
           +
Sbjct: 227 I 227



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 101/258 (39%), Gaps = 18/258 (6%)

Query: 20  FDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
             +L F L+  ++    L      + P +++  +   +    L ++   +  R L+ +++
Sbjct: 15  LGILVFALLWELLPRSGLVSAAYLSPPSEVLGAIADLVSSGLLFKHLEASLYRSLAGLLL 74

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++       L    RRL  ++ P+L + +    L      +++F           EL+ 
Sbjct: 75  AIVSGVGLGLLMGGFRRLEALVDPLLQLFRQTSALALFPVFILFFGIG--------ELSK 126

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  IF +  W +  S    +  + R L + +RS   S    F  + +P + P +   + +
Sbjct: 127 VAIIFWASFWPILLSTISGVKQVDRLLIDSARSMGASRAFLFVKVVLPAAAPSIFTGVRL 186

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD-- 256
           + +     +VA+EMI          G+G     + +   + ++   +L +  V  L +  
Sbjct: 187 AGAYCVTALVAAEMIG------AHSGLGFLTLNSQEVFQVPSMYAGILLLALVGLLLNAV 240

Query: 257 -QLLFRPMIVWSNKFRLE 273
             L+ R    W    R +
Sbjct: 241 LALIERRCTRWRRGLRAD 258


>gi|229185005|ref|ZP_04312195.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BGSC 6E1]
 gi|228598480|gb|EEK56110.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus BGSC 6E1]
          Length = 225

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   +L++++IS++       LA+++ R    L P LD MQ++P   +L   + +F 
Sbjct: 38  TMQTLALVLTSVIISIIVGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFG 97

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V G   + IFA+               +  +P DL E + +F  +  QK + + 
Sbjct: 98  V---GVVPGIIASVIFAMP-----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQ 149

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  S+      VV + ++         PG+G  +  ++ + ++     A
Sbjct: 150 LPLATGTIMAGVNQSIMLSLSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEA 202

Query: 245 MLTMLGVIFLYDQL 258
            L ++ +  + D++
Sbjct: 203 GLAIVVIAIILDRI 216



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 32/234 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W+       I      + +I+N   +   +  + L   ++   +++ I   I+     
Sbjct: 8   LIWYTTRKVSLIIFTLIGLLFILNINYWAQTMQTLALVLTSVIISIIVGIPIGILA---- 63

Query: 406 IWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
                    S  ++P    +          PA          ++++ +     +   +IF
Sbjct: 64  ---SQNERFSKFLKPTLDFMQTMPAFVYLIPA----------ITFFGVGVVPGIIASVIF 110

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I F    G    P D  E A++F  T  +    + LP      + G   +   + 
Sbjct: 111 AMPPTIRF-TDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSL 169

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 170 SMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 216


>gi|254424508|ref|ZP_05038226.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196191997|gb|EDX86961.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 255

 Score = 96.9 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    +     ++    +++ RVVV  +  +I  + VG+  G    +++ + P  QLL  
Sbjct: 49  IALVGWAKEGTMLIDIAMSLSRVVVGFMSGAIAGVFVGVLTGQYQLVANLLTPVFQLLRP 108

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   F P+V+       L        L+ +G  + +      G      +    A    
Sbjct: 109 IPPIAFVPIVILWFGLSELGKW----FLVFWGVFFTVWIAAHLGVQRVDKNLIRAAQCLG 164

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
               +    I+LPG  PY   G  T+   ++   + +E+A         +G+   I  S 
Sbjct: 165 TPEKQMLPQILLPGSLPYIFVGLRTSISISFYTLVAAELAG------TFSGIAYRIDISQ 218

Query: 548 EKGSFPE 554
           +     +
Sbjct: 219 QNLQVGK 225



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++    + +  R++   +   +       L  + + +  +L P+  +++ IP + F+  
Sbjct: 58  GTMLIDIAMSLSRVVVGFMSGAIAGVFVGVLTGQYQLVANLLTPVFQLLRPIPPIAFVPI 117

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F          +EL   F +F    + +  + +  +  + ++L   ++       Q
Sbjct: 118 VILWFGL--------SELGKWFLVFWGVFFTVWIAAHLGVQRVDKNLIRAAQCLGTPEKQ 169

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
               + +P S+P +   +  S+S  ++ +VA+E+
Sbjct: 170 MLPQILLPGSLPYIFVGLRTSISISFYTLVAAEL 203


>gi|282857566|ref|ZP_06266792.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455]
 gi|282584602|gb|EFB89944.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455]
          Length = 345

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 94/256 (36%), Gaps = 19/256 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV--PITLDVHSLPQYASRTTLRMLSAM 76
            F    F+ + G   + L            +D +      D   L   A  + + + +  
Sbjct: 104 PFYTFVFLALAGYDWLTLKTGGLPLPYFPWLDQMLEAAVADWAYLMDCAKNSLILLFTGY 163

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I +    V       +R +   + P   ++ +IP   +L   +V    L+ G       
Sbjct: 164 FIGVGAGLVTGIACGYNRNVNYWIEPFTRLLGAIPSTTWLPVVMVLAATLFRG------- 216

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            ++F I     +++T +    + NI     E +R+  + G +    + VP ++P ++  M
Sbjct: 217 -SVFIIALGVWYSVTIATKTGITNIDPAYFEAARTLGVKGMRLVGAIAVPSALPNILQGM 275

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              MS     ++ +EMI V        G+G YI           +  A++ +  +  L +
Sbjct: 276 TQGMSTACVALMVAEMIGVES------GLGWYITWQKSWARYGNMYAAVVAICVIFVLVN 329

Query: 257 QLLF---RPMIVWSNK 269
            LL    R ++ W  +
Sbjct: 330 ALLGAVRRYVLRWQER 345



 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 20/272 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           N        L +I F       +     R       F F  + G    +  ++ G  + +
Sbjct: 72  NWFILALMGLALIGFLASFCRRRAFRWMRYKAPFYTFVFLALAGYD-WLTLKTGGLPLPY 130

Query: 371 FTY---------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           F +          D  Y++     ++  +     I     +  GI  G+  +++  I+PF
Sbjct: 131 FPWLDQMLEAAVADWAYLMDCAKNSLILLFTGYFIGVGAGLVTGIACGYNRNVNYWIEPF 190

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +LL A P+  + P+V+   +            ++  G  + +      G +     + E
Sbjct: 191 TRLLGAIPSTTWLPVVMVLAATLFRG----SVFIIALGVWYSVTIATKTGITNIDPAYFE 246

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  + G R    I +P   P  + G       A  A +V+E+          +GLG 
Sbjct: 247 AARTLGVKGMRLVGAIAVPSALPNILQGMTQGMSTACVALMVAEMIG------VESGLGW 300

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           YI        +  +   V+ +C   + +N  L
Sbjct: 301 YITWQKSWARYGNMYAAVVAICVIFVLVNALL 332


>gi|268319161|ref|YP_003292817.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus johnsonii
           FI9785]
 gi|262397536|emb|CAX66550.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus johnsonii
           FI9785]
          Length = 515

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 20/187 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+++ T   A +    ++     + I  I+Q+IP L  L   + +          
Sbjct: 28  LIALLIAMVITIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+ A+    +  +  + Y  L  IP +LEE + +  L+ W+K   L +P +MP +
Sbjct: 82  --TVPAVIALVLYAIMPIFQNTYSGLTEIPENLEEAATALGLTKWKKLQRLEIPMAMPMI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
           V  + +++      ++ +  +        L    +YI + I   +     + AIL A+L 
Sbjct: 140 VAGIRIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLA 192

Query: 248 MLGVIFL 254
           ++    L
Sbjct: 193 LIFSGVL 199



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+   +      +      A ++   P+     L++  V    +   +
Sbjct: 28  LIALLIAMVITIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  +G +  P + +E A++  +T W+  + + +P   P  V G 
Sbjct: 88  ALVLYAIM----PIFQNTYSGLTEIPENLEEAATALGLTKWKKLQRLEIPMAMPMIVAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A        I +   +             YI       +  EV++G ++     L  +
Sbjct: 144 RIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLALIFS 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|182417883|ref|ZP_02949194.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium butyricum 5521]
 gi|237669397|ref|ZP_04529379.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378192|gb|EDT75726.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Clostridium butyricum 5521]
 gi|237655284|gb|EEP52842.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 527

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            VI L    +   ++ ++IA +I +P+GI+I     ++  +  FA L+ A P+      +
Sbjct: 14  EVISLLLEHIQLTLLAVLIAVVIGVPLGIFITNYKKLAKIVIGFANLVQAIPSLAILGFL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V       ++   ++++  +   I+ N   G S    D  E A    +T  +  + +
Sbjct: 74  IPVVGIG----SVPAIIMVVLYSMLPIIKNTYTGISNINPDMIESAKGVGMTNIQILKIV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   +   A     ++     G       GLG  +    +      ++ 
Sbjct: 130 KIPLAMPMIMAGIRISGVTAVGLMTIAAFVGAG-------GLGYLVFSGIQTVDNNLILF 182

Query: 558 GVLIMCCFVLALNRF 572
           G +      L ++  
Sbjct: 183 GAIPAAILALIIDYI 197



 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 84/198 (42%), Gaps = 19/198 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T L    A++I+++            ++L  +++   +++Q+IP L  L F +
Sbjct: 19  LLEHIQLTLL----AVLIAVVIGVPLGIFITNYKKLAKIVIGFANLVQAIPSLAILGFLI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                  P   IG+  A I  +  S +  +  + Y  + NI  D+ E ++   ++  Q  
Sbjct: 75  -------PVVGIGSVPAIIMVVLYSML-PIIKNTYTGISNINPDMIESAKGVGMTNIQIL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +MP ++  + +S       V A  ++ +    +   G+G  +   I+  D   
Sbjct: 127 KIVKIPLAMPMIMAGIRIS------GVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNL 179

Query: 241 ILYAMLTMLGVIFLYDQL 258
           IL+  +    +  + D +
Sbjct: 180 ILFGAIPAAILALIIDYI 197


>gi|170741664|ref|YP_001770319.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168195938|gb|ACA17885.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 297

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V +L    + TT+R+L  + +  +   +   L    R L  +L+PI+ ++  I  + +L 
Sbjct: 93  VAALLVTMAWTTMRVLVGLALGFVGGVLVGALLHSVRLLRNLLMPIVLMLAPISPVAWLP 152

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F           +  AIF +F +  + +  S    + ++P+    V+R    +  
Sbjct: 153 VAIFVFGIG--------DKPAIFLVFITLFFAIVLSTGAQIESVPKTYIHVARIMGATHR 204

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q FW + +P  +P L   + +++ G W  V+ +E + VG       G+G   A+A    +
Sbjct: 205 QTFWRVILPAILPSLFVTLRLNLFGAWMVVLIAETVGVGT------GLGQITAMARSTFN 258

Query: 238 LLAILYAMLTMLGVIFLYD 256
              + + M  +  + FL D
Sbjct: 259 AKLVFFTMAVIGLLGFLSD 277



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             V  ++     T  RV+V + +  +  + VG  +     + + + P   +LA      +
Sbjct: 91  GGVAALLVTMAWTTMRVLVGLALGFVGGVLVGALLHSVRLLRNLLMPIVLMLAPISPVAW 150

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +                L+     + I+ +  A   + P  +  VA     T  + 
Sbjct: 151 LPVAIFVFGIGDK----PAIFLVFITLFFAIVLSTGAQIESVPKTYIHVARIMGATHRQT 206

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +ILP I P           GAW   +++E    G      TGLG   A +    +  
Sbjct: 207 FWRVILPAILPSLFVTLRLNLFGAWMVVLIAETVGVG------TGLGQITAMARSTFNAK 260

Query: 554 EVVLGVLIMCCFVLALN 570
            V   + ++       +
Sbjct: 261 LVFFTMAVIGLLGFLSD 277


>gi|221196815|ref|ZP_03569862.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221203484|ref|ZP_03576503.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221177418|gb|EEE09846.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221183369|gb|EEE15769.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 280

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVISLL 81
                +  + +       +   P D V      L     L ++   +  R+L       L
Sbjct: 40  ALLFALWSVGSARGWIAPQILPPPDQVYQALAELAASGDLLRHTLISLQRVLVGFAAGTL 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F        SR     ++P  + +  IP+LG+L F ++      P K +         
Sbjct: 100 LGFAIGAALGLSRTFEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------L 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +  +T S  Q     P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +
Sbjct: 152 IAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQRIVHVVLPAAVPTLATGVRLAFT 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +V  E++   +      G+G  I    +   L  ++ A++ +  V  L ++LL
Sbjct: 212 KSWLALVVVELVASSE------GLGYLIVYGRQLFQLDLVMAAVVVVGAVGLLINRLL 263



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 21/256 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY---------- 378
            +  +  + +R++++L  +    +      +               D +Y          
Sbjct: 18  ASSRRRAAVKRLAWLLAPWALPALLFALWSVGSARGWIAPQILPPPDQVYQALAELAASG 77

Query: 379 -VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    I++ RV+V     +++   +G  +G      + + P    L   P   + P +
Sbjct: 78  DLLRHTLISLQRVLVGFAAGTLLGFAIGAALGLSRTFEAYVLPSFNALVQIPVLGWLPFL 137

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V            LL+       +  + + G    P    EVA  F  T  +   ++
Sbjct: 138 LLLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQRIVHV 193

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P   TG   A   +W A +V E+ +       + GLG  I    +      V+ 
Sbjct: 194 VLPAAVPTLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMA 247

Query: 558 GVLIMCCFVLALNRFL 573
            V+++    L +NR L
Sbjct: 248 AVVVVGAVGLLINRLL 263


>gi|33592782|ref|NP_880426.1| putative permease of ABC transporter [Bordetella pertussis Tohama
           I]
 gi|33572430|emb|CAE41996.1| putative permease of ABC transporter [Bordetella pertussis Tohama
           I]
 gi|332382195|gb|AEE67042.1| putative permease of ABC transporter [Bordetella pertussis CS]
          Length = 257

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 94/252 (37%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+    +  +L  + +      +L       VP     +V   L   S  Q    T  R
Sbjct: 10  ARKHLAGVLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVE-DLGQASFHQSLLGTLGR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++          
Sbjct: 69  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 122 -FGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLIKRVYLPAVMPE 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 235

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 236 AALIDQFVLENL 247



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 17/246 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--------CITMFRVV 391
             ++  +     +  +    AW    +++          V  LG          T+ R+ 
Sbjct: 11  RKHLAGVLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLG 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A    I  G+           ++    +L + P+  + PL +  + +     N  
Sbjct: 71  AGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTP 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + +++     +    +V+    +        A     T W   + + LP + P  +TGA 
Sbjct: 127 IIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLIKRVYLPAVMPELITGAQ 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A G AW A I +E+           GLG  +A S E      V+  +L++      +++
Sbjct: 187 LAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQ 241

Query: 572 FLWHPL 577
           F+   L
Sbjct: 242 FVLENL 247


>gi|221064916|ref|ZP_03541021.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220709939|gb|EED65307.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 256

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 77/245 (31%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
               +  +   +  ++ + W  +  G  +        + + H  Y+    +      T +
Sbjct: 4   RKTAERWAPWLLLLLIVLLWQIICSGFGVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYW 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    +A ++ + +G  IG      +   P      A P   F P++V          
Sbjct: 64  VTMAGFALAIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGAG-- 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L     + + I+ N+  G +    + ++V        W     + LP   PY+  
Sbjct: 122 --PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYG 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  + VSE+           G+G  +  +           G++++    + 
Sbjct: 180 SLKVAITLAFVGTTVSEM------TAANEGIGYLLVSAGSSMQMGLAFAGLIVVGAMAMV 233

Query: 569 LNRFL 573
           +    
Sbjct: 234 MYELF 238



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 80/223 (35%), Gaps = 14/223 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G+ E   P        +     ++  +A RT    ++   ++++   +   L   SR  
Sbjct: 30  FGVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYWVTMAGFALAIVVGVLLGFLIGSSRLA 89

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
                P++    ++P   F+   VV+F              AI   F    + +  ++  
Sbjct: 90  YAAFYPLMTAFNALPKAAFVPILVVWFGIGAGP--------AILTAFLISFFPIMVNIAT 141

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            L  +  +LE+V R      W     +G+P S+P    ++ ++++  +     SEM    
Sbjct: 142 GLATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYGSLKVAITLAFVGTTVSEMTAAN 201

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      GIG  +  A     +      ++ +  +  +  +L 
Sbjct: 202 E------GIGYLLVSAGSSMQMGLAFAGLIVVGAMAMVMYELF 238


>gi|322373031|ref|ZP_08047567.1| choline transporter [Streptococcus sp. C150]
 gi|321278073|gb|EFX55142.1| choline transporter [Streptococcus sp. C150]
          Length = 506

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 20/208 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     L  ++I++  +   A   +   R    ++ I  I Q+IP +  L        
Sbjct: 19  LGQHLQLSLLTLIIAIFISIPLAIYLSTRDRASNWVLQIAGIFQTIPSMALL-------- 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+   +    L A+ A+    ++ +  +    L  I   LEE   +F ++ W++     
Sbjct: 71  GLFIPIMGIGTLPALTALVIYAIFPILQNTITGLRGIDPSLEEAGIAFGMTKWERLKKFE 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  S       ++ +  +     +I   G+GS+I L I   +   IL  
Sbjct: 131 IPLAMPVVMSGVRTSA----VMIIGTATLAA---LIGAGGLGSFILLGIDRNNASLILIG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
            L+   +   ++ LL      W  K +L
Sbjct: 184 ALSSALLAITFNLLL-----KWMEKAKL 206



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +IIA  I IP+ I++  R   S+ +   A +    P+     L +  +    L    
Sbjct: 27  LLTLIIAIFISIPLAIYLSTRDRASNWVLQIAGIFQTIPSMALLGLFIPIMGIGTLPALT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G        +E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLRGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVVMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ +   +++G L      +  N
Sbjct: 143 RTSAVMIIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSALLAITFN 195

Query: 571 RFL 573
             L
Sbjct: 196 LLL 198


>gi|228477409|ref|ZP_04062045.1| ABC transporter membrane-spanning permease [Streptococcus
           salivarius SK126]
 gi|228250844|gb|EEK10032.1| ABC transporter membrane-spanning permease [Streptococcus
           salivarius SK126]
          Length = 509

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 84/208 (40%), Gaps = 20/208 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     L  ++I++  +   A   +   R    ++ +  + Q+IP +  L        
Sbjct: 19  LGQHLQLSLLTLIIAIFLSIPLAIYLSTRERASNWVLQLAGVFQTIPSMALL-------- 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+   +    L A+ A+    ++ +  +    L  I   LEE   +F ++ W++     
Sbjct: 71  GLFIPIMGIGTLPALTALVIYAIFPILQNTITGLRGIDPSLEEAGIAFGMTKWERLKKFE 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +  S       ++ +  +     +I   G+GS+I L I  ++   IL  
Sbjct: 131 IPLAMPVVMSGVRTSA----VMIIGTATLAA---LIGAGGLGSFILLGIDRRNYSLILIG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
            ++   +  L++ +L      W  K +L
Sbjct: 184 AISSALLAILFNIVL-----KWMEKAKL 206



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +IIA  + IP+ I++  R   S+ +   A +    P+     L +  +    L    
Sbjct: 27  LLTLIIAIFLSIPLAIYLSTRERASNWVLQLAGVFQTIPSMALLGLFIPIMGIGTLPALT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL N I G        +E   +F +T W   +   +P   P  ++G 
Sbjct: 87  ALVIYAIF----PILQNTITGLRGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVVMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG++I    ++ ++  +++G +      +  N
Sbjct: 143 RTSAVMIIGTATLAALIGAG-------GLGSFILLGIDRRNYSLILIGAISSALLAILFN 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|295400736|ref|ZP_06810713.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977317|gb|EFG52918.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 255

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 64/158 (40%), Gaps = 10/158 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P+  LL+  P  +F P  ++ +  +          L+  GT W+I    + 
Sbjct: 85  HHRLRHVLMPYVHLLSPLPPTLFVPYAIAVLPTF----ESASIFLIFIGTFWHIFLGTLH 140

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G       + + A +  + G      +I+P   P+ ++GA +A   ++    ++E+    
Sbjct: 141 GVLIIEKQYLDNAKTLGLKGNDLLFKVIIPAASPHILSGAGSALTMSFLILTMAEMFG-- 198

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                 +G+G +I   T+   +  V+ G++     +L 
Sbjct: 199 ----AKSGMGYFIQYYTDFAQYDYVIAGIIFNSAVILI 232



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 83/215 (38%), Gaps = 17/215 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L      +   ++ A + S++       L     RL  VL+P + ++  +P   F+
Sbjct: 49  NIEELLLGLVSSLRLLIPAYIGSIILGIGGGLLLGLHHRLRHVLMPYVHLLSPLPPTLFV 108

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            + +              E A+IF IF    W++       +  I +   + +++  L G
Sbjct: 109 PYAIAVL--------PTFESASIFLIFIGTFWHIFLGTLHGVLIIEKQYLDNAKTLGLKG 160

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P + P ++     +++  +  +  +EM           G+G +I       
Sbjct: 161 NDLLFKVIIPAASPHILSGAGSALTMSFLILTMAEMFGAKS------GMGYFIQYYTDFA 214

Query: 237 DLLAILYAML---TMLGVIFLYDQLLFRPMIVWSN 268
               ++  ++    ++ +  L  + L + ++ W+N
Sbjct: 215 QYDYVIAGIIFNSAVILIALLLFEKLKKRLLFWTN 249


>gi|209886210|ref|YP_002290067.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209874406|gb|ACI94202.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 279

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  I     +     +      T++   +   I +++ +  GIW+G  P  S  + P+  
Sbjct: 65  LEVIARLVAWTSDGSIFVHIWATVYATFLGFAIGAVLGVVGGIWLGVSPFFSRLLNPYIW 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
              A P     PL++        +     ++L++F        N  +G      D  +  
Sbjct: 125 AFNALPKVALAPLLILWFGLGIHSKVALAAVLVVFLVF----VNTFSGVREVDQDLIDGV 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   +    +ILP    +   G  ++   A    I+ E+ +         GLG  +
Sbjct: 181 RLMKAKRSQILMKVILPSALSWIFVGLKSSLPYALIGVIIGEMIA------SNKGLGYLV 234

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  +         + I+      LN F+
Sbjct: 235 QRAGSEFDTAGAFAALTIIAVIAAVLNEFV 264



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 73/217 (33%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P +++  +       S+  +   T         I  +   V       S     +L P
Sbjct: 62  SSPLEVIARLVAWTSDGSIFVHIWATVYATFLGFAIGAVLGVVGGIWLGVSPFFSRLLNP 121

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    ++P +      +++F      KV  A +  +F +          + +  +  + 
Sbjct: 122 YIWAFNALPKVALAPLLILWFGLGIHSKVALAAVLVVFLV--------FVNTFSGVREVD 173

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +DL +  R  +    Q    + +P ++  +   +  S+      V+  EMI         
Sbjct: 174 QDLIDGVRLMKAKRSQILMKVILPSALSWIFVGLKSSLPYALIGVIIGEMIASNK----- 228

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  +  A  E D      A+  +  +  + ++ +
Sbjct: 229 -GLGYLVQRAGSEFDTAGAFAALTIIAVIAAVLNEFV 264


>gi|168212557|ref|ZP_02638182.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens CPE str. F4969]
 gi|170715892|gb|EDT28074.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium
           perfringens CPE str. F4969]
          Length = 517

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 81/205 (39%), Gaps = 15/205 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++A+ I++L       L ++ + L   +V  ++++Q++P +          +
Sbjct: 19  LVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIVGFVNLVQAVPSMA--------LL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +      AIF +    +  +  + Y  +  I   + E ++   L+  Q  + + 
Sbjct: 71  GLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       V A  ++ +    I   G+G  +   ++  +   IL  
Sbjct: 131 LPLALPIIMSGIRIS------AVTAVGLMTLAAF-IGAGGLGYLVFSGVQTVNNNMILAG 183

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            +    +  + D +  +  +  + K
Sbjct: 184 AIPACILALIVDFIFGKIEVAVTPK 208



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    ++  +  I IA +I +P+GI +     +   I  F  L+ A P+   
Sbjct: 10  SQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIVGFVNLVQAVPSMA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +       +     +++  +   I+ N   G S       E A    +T  + 
Sbjct: 69  ---LLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQS 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP   P  ++G   +   A     ++     G       GLG  +    +  +  
Sbjct: 126 LFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAG-------GLGYLVFSGVQTVNNN 178

Query: 554 EVVLGVLIMCCFVLALN 570
            ++ G +  C   L ++
Sbjct: 179 MILAGAIPACILALIVD 195


>gi|148254139|ref|YP_001238724.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406312|gb|ABQ34818.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 258

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 13/248 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W     G+       ++  +            +     ++ R+ +   +A    I
Sbjct: 16  GLLLTWQLASLGLKNDSFPTALDSLRAIPPILTDKEALINILASLRRMAIGFALALAFSI 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+ +G     ++   P   L+   P     P+++  +    ++     +L++  G   
Sbjct: 76  PLGLLMGRSRATAAFFNPLLMLVYPVPKAALMPIIMLWLGVGDVSK----TLVIFLGVSL 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++++   GA A         ++  ++       I+LP   P  +TG  T    A    +
Sbjct: 132 PVIYHSFEGAKAVEEKMLWSGAAMGLSAGERLLRIVLPAALPEILTGCRTGLVLALITMV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYL 579
            SE+ +      R +G G  +  + + G +  V   ++I+    + L+         L  
Sbjct: 192 TSEMIA------RQSGAGNILFNALDMGQYDTVFAMIIIIGAMGICLDAVFETIRRWLVR 245

Query: 580 YGTRCLRL 587
           +      +
Sbjct: 246 WSEPQFDM 253



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 85/256 (33%), Gaps = 18/256 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
                     +L   + ++ L      T    +  I PI  D  +L      +  RM   
Sbjct: 8   LSPALACCGLLLTWQLASLGLKNDSFPTALDSLRAIPPILTDKEALIN-ILASLRRMAIG 66

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             ++L F+     L  +SR       P+L ++  +P    +   +++       K +   
Sbjct: 67  FALALAFSIPLGLLMGRSRATAAFFNPLLMLVYPVPKAALMPIIMLWLGVGDVSKTL--- 123

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
                 IF      + +  ++    +   +     +  LS  ++   + +P ++P ++  
Sbjct: 124 -----VIFLGVSLPVIYHSFEGAKAVEEKMLWSGAAMGLSAGERLLRIVLPAALPEILTG 178

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               +      +V SEMI          G G+ +  A+       +   ++ +  +    
Sbjct: 179 CRTGLVLALITMVTSEMIA------RQSGAGNILFNALDMGQYDTVFAMIIIIGAMGICL 232

Query: 256 DQLLF---RPMIVWSN 268
           D +     R ++ WS 
Sbjct: 233 DAVFETIRRWLVRWSE 248


>gi|150015494|ref|YP_001307748.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149901959|gb|ABR32792.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 350

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   +I     +M  +V+   I +I+ I  G+ IG+       I P  +++   PA  +
Sbjct: 145 EDYGTLIISTGHSMRLLVIGFTIGTILGITTGVLIGWYRQWHYWIFPIIKIIGVVPATAW 204

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+V+                L++    + + F   +G    P  + E A +        
Sbjct: 205 IPIVMFIFPSSFYAQ----IFLIVICVWFPVAFMTSSGIENLPKSYFEAAKTLGAKDDFL 260

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + + G  P    G  TA G ++   +VSE+           GLG YI  +    ++ 
Sbjct: 261 IFNVAILGAMPSIFIGIYTATGLSFATLVVSEMIG------AKAGLGWYINWAKGWSNYA 314

Query: 554 EVVLGVLIMCCF 565
           +V   ++IM   
Sbjct: 315 KVYASIIIMAIV 326



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 84/238 (35%), Gaps = 14/238 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +++  ++    + +     P     +  +  D  +L      +   ++    I  +  
Sbjct: 113 ILLIMWDLLTTKSNTLPLPFFPSFAQILQVMVEDYGTLIISTGHSMRLLVIGFTIGTILG 172

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L    R+    + PI+ I+  +P   ++   +  F          +  A IF I 
Sbjct: 173 ITTGVLIGWYRQWHYWIFPIIKIIGVVPATAWIPIVMFIF--------PSSFYAQIFLIV 224

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + + F     + N+P+   E +++         + + +  +MP +   +  +    
Sbjct: 225 ICVWFPVAFMTSSGIENLPKSYFEAAKTLGAKDDFLIFNVAILGAMPSIFIGIYTATGLS 284

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +  +V SEMI          G+G YI  A    +   +  +++ M  V  +   ++F+
Sbjct: 285 FATLVVSEMIGAKA------GLGWYINWAKGWSNYAKVYASIIIMAIVFSIVMAIIFK 336


>gi|262275252|ref|ZP_06053062.1| putative sulfonate ABC transporter permease protein [Grimontia
           hollisae CIP 101886]
 gi|262220497|gb|EEY71812.1| putative sulfonate ABC transporter permease protein [Grimontia
           hollisae CIP 101886]
          Length = 247

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 14/228 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    E   P  + +     L    +  +   T  R+  + VIS++   V+  +  +   
Sbjct: 25  LLNSAEYPTPVQVYNAFVFELFNEQMLSHLGITLWRVFLSFVISMVLGVVFGIMMGRFAN 84

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +  P+L +  +IP L  +    +             E AA+ A+  +++  +   + 
Sbjct: 85  LNELSDPLLILALNIPALVTILLCYLGIGL--------VETAAVTAVALNKIPTVVAMIR 136

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           +    +  DL +V++ FRLS  ++F+ + +P   P ++ +    +S  W  V+  E++  
Sbjct: 137 EGARVVDDDLMDVAKVFRLSPTKRFFNVFLPQLYPYIMASARTGLSLIWKIVLVVELLGR 196

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            +      G+G  +    +  D+  IL      + VIFL + LLFRP+
Sbjct: 197 SN------GVGFKLHTLFQFFDIAGILAYTFAFVTVIFLLEALLFRPL 238



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 10/206 (4%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT++RV +  +I+ ++ +  GI +G   +++    P   L    PA V   L 
Sbjct: 49  QMLSHLGITLWRVFLSFVISMVLGVVFGIMMGRFANLNELSDPLLILALNIPALVTILLC 108

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +          ++L  I      ++  +  GA    +D  +VA  F ++  + +  +
Sbjct: 109 YLGIGLVETAAVTAVALNKIPT----VVAMIREGARVVDDDLMDVAKVFRLSPTKRFFNV 164

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP ++PY +  A T     W   +V E+        R+ G+G  +    +      ++ 
Sbjct: 165 FLPQLYPYIMASARTGLSLIWKIVLVVELLG------RSNGVGFKLHTLFQFFDIAGILA 218

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
                   +  L   L+ PL    +R
Sbjct: 219 YTFAFVTVIFLLEALLFRPLDRVVSR 244


>gi|300362061|ref|ZP_07058238.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus gasseri JV-V03]
 gi|300354680|gb|EFJ70551.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus gasseri JV-V03]
          Length = 515

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 20/187 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+++     A +    ++     + I  I+Q+IP L  L   + +          
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAILGLLLPFVGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  +  + Y  L +IP +LEE + +F L+ W+K   L +P +MP +
Sbjct: 82  --TTPAIIALVLYAIMPIFQNTYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMPMI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
              + +++      ++ +  +        L    +YI + I   +     + AIL A+L 
Sbjct: 140 FAGVRIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLA 192

Query: 248 MLGVIFL 254
           ++    L
Sbjct: 193 LVFSGVL 199



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+   +      +      A ++   P+     L++  V        +
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  +G +  P++ +E A++F +T W+  + + +P   P    G 
Sbjct: 88  ALVLYAIM----PIFQNTYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMPMIFAGV 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A        I +   +             YI       +  EV++G ++     L  +
Sbjct: 144 RIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLALVFS 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|330821637|ref|YP_004350499.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia gladioli BSR3]
 gi|327373632|gb|AEA64987.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Burkholderia gladioli BSR3]
          Length = 333

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    +I+S + +P+GI  G    ++   +PF +     PA  F  L+V+ +  Y 
Sbjct: 140 SIQVIFWGFVISSALGVPIGILCGVFGAVARLNEPFLEFFRYLPAPAFGALMVAVLGIYD 199

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  V            E A +          ++ +PGI P 
Sbjct: 200 APK----IAIIVIGTFFQQVLIVANTTRKLDYALFEAAMTLGAKKPGLVAHVAIPGILPD 255

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    G AW   IV+E+         ++G+  YI++      F  V   +L++   
Sbjct: 256 LYRDQRILLGWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGII 309

Query: 566 VLALNR---FLWHPLYLY 580
            L  +     L   L+ +
Sbjct: 310 GLGTDIVLGLLGRKLFPW 327



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                  P + +   L Q    +   +    VIS         L      +  +  P L+
Sbjct: 118 YTAFTTPPASREGVWLHQSLWHSIQVIFWGFVISSALGVPIGILCGVFGAVARLNEPFLE 177

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             + +P   F    V         K        I  I     +     +  +   +   L
Sbjct: 178 FFRYLPAPAFGALMVAVLGIYDAPK--------IAIIVIGTFFQQVLIVANTTRKLDYAL 229

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +          ++ +P  +P L  +  + +   W +++ +E++          GI
Sbjct: 230 FEAAMTLGAKKPGLVAHVAIPGILPDLYRDQRILLGWAWTYLIVAELVGTSS------GI 283

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
             YI+   + Q    +  A+L +  +    D    LL R +  W
Sbjct: 284 TWYISQQARYQHFDNVYAAILMIGIIGLGTDIVLGLLGRKLFPW 327


>gi|254780341|ref|YP_003064754.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040018|gb|ACT56814.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 281

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 18/240 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L FV V+ ++ +++       V   +  ++ I        Q  + T   +L +  IS+  
Sbjct: 54  LVFVCVVSLLVLMVKRSITIAVGTAMGLLLIIK---QGYWQETTETLSLVLVSTFISMFI 110

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LAA   R   ++   LD MQ+IP   +L   +V F     G V G     +F+I
Sbjct: 111 GVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGL---GMVPGIVATIVFSI 167

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            TS            + + P  L+E + +F  + +Q F  + +PF++P +V ++  ++  
Sbjct: 168 PTS-----VRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIML 222

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
               VV + ++          G+G  +  A+   D+     + L ++ +  + D+L   P
Sbjct: 223 SLSMVVVTALVGSN-------GLGVPVLRALNTVDIGRGFESGLCIVILAIILDRLFSIP 275



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V   I+  I +P+G+   + P   S I+ F   +   P  V+    +       
Sbjct: 96  TLSLVLVSTFISMFIGVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I  +          G  + P   KE A +F  T ++ +R + LP   P 
Sbjct: 156 VPGIVATIVFSIPTSVRL----TRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V         + +  +V+ +         + GLG  +  +             L +   
Sbjct: 212 IVASLTQTIMLSLSMVVVTALVG-------SNGLGVPVLRALNTVDIGRGFESGLCIVIL 264

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 265 AIILDRLF 272


>gi|146342347|ref|YP_001207395.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195153|emb|CAL79178.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 255

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 13/207 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++   ++  FT  D+L  +     T+  +    ++ASI+ I +G  IG    + S + P 
Sbjct: 42  RAWASLLRGFTSGDLLTKL---AGTLAHMAYGWLLASIVGIALGAMIGSSKAMRSYVAPT 98

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +LL   P +   P+ ++ +             ++ FG+ W +L   I G +A      E
Sbjct: 99  LELLRPLPVSAIIPVAIAALGLSQS----MALFVIAFGSLWPMLLGTIHGFAAVEPRLYE 154

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA   H++       I LP   P  + G   +   A   ++V E+ +         GLG 
Sbjct: 155 VARVLHMSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVCEMLAG------LDGLGQ 208

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLA 568
           ++  S       ++  GVL++      
Sbjct: 209 WVLLSARAFRSADLFAGVLLLGAIGYV 235



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 76/213 (35%), Gaps = 14/213 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P      +        L    + T   M    +++ +       +   S+ +   + 
Sbjct: 37  LPGPDRAWASLLRGFTSGDLLTKLAGTLAHMAYGWLLASIVGIALGAMIGSSKAMRSYVA 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L++++ +P+   +   +             ++  A+F I    +W M          +
Sbjct: 97  PTLELLRPLPVSAIIPVAIAALGL--------SQSMALFVIAFGSLWPMLLGTIHGFAAV 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L EV+R   +S     + + +P + P ++  M +S++      V  EM+        
Sbjct: 149 EPRLYEVARVLHMSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVCEMLAG------ 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           L G+G ++ L+ +      +   +L +  + ++
Sbjct: 203 LDGLGQWVLLSARAFRSADLFAGVLLLGAIGYV 235


>gi|266619062|ref|ZP_06111997.1| ABC transporter, permease protein, cysTW family [Clostridium
           hathewayi DSM 13479]
 gi|288869429|gb|EFD01728.1| ABC transporter, permease protein, cysTW family [Clostridium
           hathewayi DSM 13479]
          Length = 255

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +    V   + +    +  G +V+  +  +    I L   T  ++      A +  I
Sbjct: 19  LWQLISIAVHNSIVLVGPAEVAGALVSQISTVEFWRTIGL---TFGKICSGFSGAFLAGI 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            VG      P +   ++P   L+ + P   F  L +  +     N +++++ L++F    
Sbjct: 76  LVGSAACRFPFLKDLLEPVMVLVKSVPVASFVILALIWIG--SKNLSVFIAFLVVFPM-- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N I+G ++      E+A  FH++GW+ +RYI  P + PY + GA  + G ++ + I
Sbjct: 132 -IYVNTISGLNSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFKSGI 190

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +EV       +      A I  ST      ++    L++        +  
Sbjct: 191 AAEVIGVPDHSIGEKLYMAKIYLSTA-----DLFAWTLVIIVISGLFEKVF 236



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++  +I+I +H       P ++   +   +      +    T  ++ S    + L   +
Sbjct: 17  LVLWQLISIAVHNSIVLVGPAEVAGALVSQISTVEFWRTIGLTFGKICSGFSGAFLAGIL 76

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
             + A +   L  +L P++ +++S+P+  F+   +++         IG++  ++F  F  
Sbjct: 77  VGSAACRFPFLKDLLEPVMVLVKSVPVASFVILALIW---------IGSKNLSVFIAFLV 127

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  +    L +    L E++  F +SGW+KF Y+  P  +P L+    +S+   + 
Sbjct: 128 VFPMIYVNTISGLNSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFK 187

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             +A+E+I V D       IG  + +A        +    L ++ +  L++++  + +  
Sbjct: 188 SGIAAEVIGVPDHS-----IGEKLYMAKIYLSTADLFAWTLVIIVISGLFEKVFIQLLKA 242


>gi|329117016|ref|ZP_08245733.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
 gi|326907421|gb|EGE54335.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parauberis NCFD 2020]
          Length = 507

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 15/171 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L +KS+R   +++ I  I Q+IP L  L   +        G V       I+AIF     
Sbjct: 43  LLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMG---IGTVPAVTALVIYAIF----- 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    L  I   L E   +F ++ W++     +P +MP ++  +  S       ++
Sbjct: 95  PIVQNTITGLNGIEPSLVEAGTAFGMTKWERLKKFEIPIAMPVIMSGVRTSA----VMII 150

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  +     +I   G+GS+I L I   +   IL   ++   +  L++ +L
Sbjct: 151 GTATLAA---LIGAGGLGSFILLGIDRNNPNLILIGAISSAILAILFNTIL 198



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +      S  +     +    P+     L +  +    +     L +  IF     I+ 
Sbjct: 43  LLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMGIGTVPAVTALVIYAIF----PIVQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G +       E  ++F +T W   +   +P   P  ++G  T+       + ++ +
Sbjct: 99  NTITGLNGIEPSLVEAGTAFGMTKWERLKKFEIPIAMPVIMSGVRTSAVMIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 159 IGAG-------GLGSFILLGIDRNNPNLILIGAISSAILAILFNTIL 198


>gi|325964253|ref|YP_004242159.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470340|gb|ADX74025.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 280

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM    + ++IA    + +G  IG    +        + L   P+    PL V       
Sbjct: 83  TMKAWFLGLLIAVAAAVLLGFVIGSSGFLRKATNSTIEFLRPIPSVALIPLAVLLFGV-- 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+++ + W +L  V+ G +         A ++ +      RY++ P   PY
Sbjct: 141 --KIESSLLLIVYASFWQVLIQVLYGVADVDMVANNTAKTYGLGRMARIRYVVFPTALPY 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   A   +I +E+       + + GLG  IA +   G+   +   VL     
Sbjct: 199 LMTGVRLAAAVALVLAITAELV------IGSPGLGREIALAQSGGAISGMYALVLATGLI 252

Query: 566 VLALNRFLWH 575
            + +N  +  
Sbjct: 253 GVLINVLMRQ 262



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 98/272 (36%), Gaps = 18/272 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQY 64
                 + +    I  ++ F+    +I  L    +    P  +++  + +   + +    
Sbjct: 20  RRAGKGTAKQLLGILGIIGFLATWELIPRLGLIDERFLPPATEVIAALIVDFGLTAFWVA 79

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T       ++I++    +   +   S  L       ++ ++ IP +  +   V+ F 
Sbjct: 80  VGETMKAWFLGLLIAVAAAVLLGFVIGSSGFLRKATNSTIEFLRPIPSVALIPLAVLLFG 139

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 ++         I  +  W +   +   + ++       ++++ L    +  Y+ 
Sbjct: 140 VKIESSLL--------LIVYASFWQVLIQVLYGVADVDMVANNTAKTYGLGRMARIRYVV 191

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P L+  + ++ +      + +E++      I  PG+G  IALA     +  +   
Sbjct: 192 FPTALPYLMTGVRLAAAVALVLAITAELV------IGSPGLGREIALAQSGGAISGMYAL 245

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFRLE 273
           +L    +  L + L   + + ++ W +  R E
Sbjct: 246 VLATGLIGVLINVLMRQIEKRILAWHSSVRSE 277


>gi|264680469|ref|YP_003280379.1| probable ABC transporter permease [Comamonas testosteroni CNB-2]
 gi|262210985|gb|ACY35083.1| probable ABC transporter permease protein [Comamonas testosteroni
           CNB-2]
          Length = 256

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 79/245 (32%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   +  +   +  ++ + W  +  G+ +        + + H  Y+    +      T +
Sbjct: 4   QKIAERWAPWLLLLLIVLLWQIICSGLGVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYW 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    +A ++ + +G  IG      +   P      A P   F P++V          
Sbjct: 64  VTMAGFALAIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGAG-- 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L     + + I+ N+  G +    + ++V        W     + LP   PY+  
Sbjct: 122 --PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYG 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  + VSE+           G+G  +  +           G++++    + 
Sbjct: 180 SLKVAITLAFVGTTVSEM------TAANEGIGYLLVSAGSSMQMGLAFAGLIVVGAMAMV 233

Query: 569 LNRFL 573
           +    
Sbjct: 234 MYELF 238



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 14/222 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+ E   P        +     ++  +A RT    ++   ++++   +   L   SR   
Sbjct: 31  GVSEFIFPSPWAIGHQLYEFAGTIAMHAWRTYWVTMAGFALAIVVGVLLGFLIGSSRLAY 90

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
               P++    ++P   F+   VV+F              AI   F    + +  ++   
Sbjct: 91  AAFYPLMTAFNALPKAAFVPILVVWFGIGAGP--------AILTAFLISFFPIMVNIATG 142

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +  +LE+V R      W     +G+P S+P    ++ ++++  +     SEM    +
Sbjct: 143 LATLEPELEDVLRVLGAKRWDVLIKVGLPRSLPYFYGSLKVAITLAFVGTTVSEMTAANE 202

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 GIG  +  A     +      ++ +  +  +  +L 
Sbjct: 203 ------GIGYLLVSAGSSMQMGLAFAGLIVVGAMAMVMYELF 238


>gi|169629262|ref|YP_001702911.1| ABC transporter permease [Mycobacterium abscessus ATCC 19977]
 gi|169241229|emb|CAM62257.1| Probable ABC transporter, permease protein [Mycobacterium
           abscessus]
          Length = 285

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 83/212 (39%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L  ++I +    +   L      +  VL P L  ++++P L +    V
Sbjct: 87  LIEHLYMTLRRLLFGVLIGITAGVLLGLLMGSVGWVRSVLEPWLTFLRTLPPLAYFFLLV 146

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S WQ  
Sbjct: 147 IWLGIDEAPKITLLALAALPPAAVATTAAVVAAPVG--------LVEAARALGASRWQVT 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P     + +++   +  VVA+E+         +PG+G  +  A    +   
Sbjct: 199 RDVVIPAALPETFTGVRLAVGMAYSSVVAAELF------NGIPGVGGLVKDASNYNNTPV 252

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           +L  + ++     + D   + + R  + W  K
Sbjct: 253 VLVGIFSIGISGLVIDAALRAVERRAVPWRGK 284



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 95/267 (35%), Gaps = 25/267 (9%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           + G      P  +    +   +  +  + +  V    A    W           +   + 
Sbjct: 12  SRGTRAVPRPSQWRVRLTRAALPLLSVVVFIGVWQLAAASGIWNQTFVPYPSSVWHAFVE 71

Query: 379 V---------------IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           V               I    +T+ R++  ++I     + +G+ +G    + S ++P+  
Sbjct: 72  VSTDHDGVHGYGGYLLIEHLYMTLRRLLFGVLIGITAGVLLGLLMGSVGWVRSVLEPWLT 131

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L   P   +F L+V  +          L+L  +            A   A P    E A
Sbjct: 132 FLRTLPPLAYFFLLVIWLGIDEAPKITLLALAALPPAA----VATTAAVVAAPVGLVEAA 187

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   + W+  R +++P   P   TG   A G A+++ + +E+ +         G+G  +
Sbjct: 188 RALGASRWQVTRDVVIPAALPETFTGVRLAVGMAYSSVVAAELFNG------IPGVGGLV 241

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
            +++   + P V++G+  +    L ++
Sbjct: 242 KDASNYNNTPVVLVGIFSIGISGLVID 268


>gi|121611200|ref|YP_999007.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555840|gb|ABM59989.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 272

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 21/255 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----LPQYASRTTLRMLSAMV 77
           L+ F L   + N           P+ +       L   +    L Q+   + LR+ SA +
Sbjct: 31  LVLFALWFIVTNTGRVSPLFLPTPQAVFAQFCQYLTGQANDKPLWQHFLASMLRVFSAFL 90

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++             SR    ++ P L+  + +P L +L   +++F           EL 
Sbjct: 91  LACATAIPVGIAMGMSRWWRGIVDPPLEFYRPLPPLAYLPLIIIWFGID--------ELP 142

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  IF S    +  +  Q + +  ++    + S   S  Q   ++ +P ++P ++  M 
Sbjct: 143 KVLLIFLSCFAPLALAARQGMRSASQEQINAAYSLGASYMQLIGHVILPSALPEILVGMR 202

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++  GW  +VA+EM+          G+G  +  A        ++  ++ +  V +L+D 
Sbjct: 203 IAIGFGWTTLVAAEMVA------ADIGLGQMVLNASNFLRTDIVIMGIIVIGVVAYLFDL 256

Query: 258 L---LFRPMIVWSNK 269
           L   L R ++ W  +
Sbjct: 257 LMRWLERRLVPWKGR 271



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M RV    ++A    IPVGI +G        + P  +     P   + PL++     
Sbjct: 79  LASMLRVFSAFLLACATAIPVGIAMGMSRWWRGIVDPPLEFYRPLPPLAYLPLIIIWFGI 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   LL+       +      G  +   +    A S   +  +   ++ILP   
Sbjct: 139 ----DELPKVLLIFLSCFAPLALAARQGMRSASQEQINAAYSLGASYMQLIGHVILPSAL 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G  W   + +E+ +         GLG  +  ++       V++G++++ 
Sbjct: 195 PEILVGMRIAIGFGWTTLVAAEMVA------ADIGLGQMVLNASNFLRTDIVIMGIIVIG 248

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
                 +  +      +  R L
Sbjct: 249 VVAYLFDLLM-----RWLERRL 265


>gi|330503653|ref|YP_004380522.1| ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328917939|gb|AEB58770.1| ABC transporter, permease protein [Pseudomonas mendocina NK-01]
          Length = 288

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 90/239 (37%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   L+  +                        +    L +  + +   ++   ++ + 
Sbjct: 45  LLVLALIWELAARYQGNDLLLPSFVQTAKAFVEGIGSGELLEKVAISLSVLVKGYLLGIG 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+  TLA  ++    +L  +  +   +P +  L  ++++F           E + IF 
Sbjct: 105 LAFLLTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPLSLLWFGLG--------ENSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +   ++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLRGLRFVLFILIPAALPSILSGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLVF 273



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 6/191 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++  +V   ++   +   +             +     +    PA    PL +     
Sbjct: 89  AISLSVLVKGYLLGIGLAFLLTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPLSLLWFGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L  +++    W +  N  AG        +    ++ + G R+  +I++P   
Sbjct: 149 GENS----LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLRGLRFVLFILIPAAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G       AW   I +E+           GLG YI ++  +    +V  G+  + 
Sbjct: 205 PSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVI 262

Query: 564 CFVLALNRFLW 574
              L +   ++
Sbjct: 263 LIGLLVENLVF 273


>gi|118463383|ref|YP_879437.1| aliphatic sulfonates ABC transporter permease [Mycobacterium avium
           104]
 gi|254773186|ref|ZP_05214702.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118164670|gb|ABK65567.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium avium 104]
          Length = 233

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
            +   P D+V  +        L  +   +  R+L+             +L   S     +
Sbjct: 16  SQLPPPGDVVAALSDLARHGELWTHLRASGWRVLAGYASGAAAGLALGSLVGLSAAARRL 75

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P +   +++P L ++   +++F      K++   + A F ++T+           +L 
Sbjct: 76  LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAVGAFFPVYTT--------TASALS 127

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +I   L EV R++   G      + +P + P LV  + + ++  W FVVA+E+I      
Sbjct: 128 HIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVVAAELIASSK-- 185

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G  +  +        +L A++ + G+  L D  L
Sbjct: 186 ----GLGFLLIDSQNSGRTDVMLLAIVLLAGLGKLSDAAL 221



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 10/200 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            + +RV+      +   + +G  +G        + P        P+  + PL++      
Sbjct: 43  ASGWRVLAGYASGAAAGLALGSLVGLSAAARRLLAPTVAAFRTVPSLAWVPLLLLWFGI- 101

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L++  G  + +     +  S       EV  ++   G      ++LP   P
Sbjct: 102 ---DETPKILMVAVGAFFPVYTTTASALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAP 158

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V G       AW   + +E+ +       + GLG  + +S   G    ++L ++++  
Sbjct: 159 ELVNGLRLGLANAWLFVVAAELIA------SSKGLGFLLIDSQNSGRTDVMLLAIVLLAG 212

Query: 565 FVLALNRFLWHPLYLYGTRC 584
                +  L         R 
Sbjct: 213 LGKLSDAALGAVETRIARRR 232


>gi|298368917|ref|ZP_06980235.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298282920|gb|EFI24407.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 515

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q         L A++ ++      A   A  RR    ++ + +I+Q+IP L  L 
Sbjct: 9   PAELWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +     P  +I   L A+  IF         + Y  L  I   ++E   +F LS W
Sbjct: 69  LLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLSQIDPAIKEAHTAFGLSRW 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q  W + +P ++P ++  +  +
Sbjct: 121 QALWRIELPMALPAMISGIRTA 142



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 5/150 (3%)

Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W   +   R+ ++ ++ ++ + +P+ +W+  +   +  +     +L   P+     L++
Sbjct: 12  LWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLI 71

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V        + L+L  +      I  N   G S      KE  ++F ++ W+    I 
Sbjct: 72  PFVGIGSPPVLIALTLYALL----PIFQNTYLGLSQIDPAIKEAHTAFGLSRWQALWRIE 127

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           LP   P  ++G  TA       + ++ +  
Sbjct: 128 LPMALPAMISGIRTASVLIIGTATLAALIG 157


>gi|332524983|ref|ZP_08401167.1| binding-protein-dependent transport systems inner membrane
           component [Rubrivivax benzoatilyticus JA2]
 gi|332108276|gb|EGJ09500.1| binding-protein-dependent transport systems inner membrane
           component [Rubrivivax benzoatilyticus JA2]
          Length = 256

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  ++   +A ++ + +G  +G      + + P      A P     P++V       
Sbjct: 61  TFWVTMLGFALAIVVGVMLGFLVGSSRAAYAALYPLLVGFNAVPKAAIVPILVVWFGIG- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L P +  + L+   + + I  N+  G +    + ++V        W     + LP   PY
Sbjct: 120 LGPGILTAFLI---SFFPITVNIATGLATLEPELEDVLRVLGARRWDVLVKVGLPRSLPY 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  ++++E+          +G+G  +  +  +   P    G++ +   
Sbjct: 177 FYGSLKIAITLAFVGTVLAEM------TAGDSGIGYLMQTAGSQQRMPLAFAGLVTIGAM 230

Query: 566 VLALNRFL 573
            + +    
Sbjct: 231 AMVMYELF 238



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + A +T    +    ++++   +   L   SR     L P+L    ++P    +   V
Sbjct: 54  LLEAAWKTFWVTMLGFALAIVVGVMLGFLVGSSRAAYAALYPLLVGFNAVPKAAIVPILV 113

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F       ++ A L + F         +T ++   L  +  +LE+V R      W   
Sbjct: 114 VWFGIGLGPGILTAFLISFF--------PITVNIATGLATLEPELEDVLRVLGARRWDVL 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +G+P S+P    ++ ++++  +   V +EM           GIG  +  A  +Q +  
Sbjct: 166 VKVGLPRSLPYFYGSLKIAITLAFVGTVLAEM------TAGDSGIGYLMQTAGSQQRMPL 219

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
               ++T+  +  +  +L   + +    W+++
Sbjct: 220 AFAGLVTIGAMAMVMYELFSWIEKRTTSWAHR 251


>gi|111023999|ref|YP_706971.1| ABC taurine uptake transporter, permease protein [Rhodococcus
           jostii RHA1]
 gi|110823529|gb|ABG98813.1| ABC taurine uptake transporter, permease protein [Rhodococcus
           jostii RHA1]
          Length = 286

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 82/218 (37%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +            L  +   +  R    +   +L   V   L+  S     ++ 
Sbjct: 66  LAGPPAVWQAFVELYQSGQLLDFGVASLQRAALGVGCGVLIGLVLGVLSGLSALGEELID 125

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + I +++P L  +   + +F           E   +  I  + +  M    Y  +  +
Sbjct: 126 STMQINRAVPFLALVPLFIAWFGID--------ETFKVVLISVATLAPMYAYTYLGVRGV 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R + E +R F L+GW+  +   +P ++PG++  + + +S     ++A+E +        
Sbjct: 178 DRKMVEAARGFGLTGWRLVFGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------T 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  + LA +      ++  ++    +  ++D ++
Sbjct: 232 REGIGYLVTLAQEYNRTDYMVLCIVMYAILGLVFDAVV 269



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 64/199 (32%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++  G  ++ R  + +    +I + +G+  G        I    Q+  A P     
Sbjct: 81  QSGQLLDFGVASLQRAALGVGCGVLIGLVLGVLSGLSALGEELIDSTMQINRAVPFLALV 140

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL ++           +  +L+   T   +      G         E A  F +TGWR  
Sbjct: 141 PLFIAWFGI----DETFKVVLISVATLAPMYAYTYLGVRGVDRKMVEAARGFGLTGWRLV 196

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
              ILP   P  + G       +    I +E            G+G  +  + E      
Sbjct: 197 FGAILPTALPGVLMGLRICLSLSITGLIAAEQVG------TREGIGYLVTLAQEYNRTDY 250

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +VL +++     L  +  +
Sbjct: 251 MVLCIVMYAILGLVFDAVV 269


>gi|298290871|ref|YP_003692810.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927382|gb|ADH88191.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 270

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L+       L          + +  +   L    LP+    +   +L+   I + 
Sbjct: 27  LVGLALIWESYARWLGNSLLLPSFLETLGALRENLRNGELPERVRASLGILLTGYGIGIG 86

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LAA SR    +L  +  +   +P +  L   +++F             + +F 
Sbjct: 87  VAAIITALAALSRWGESLLGLLTAMFNPLPAIALLPVALLWFGVG--------ASSLVFV 138

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S +W +  + +     +P  L    R+  L+G      L +P ++P ++  + +  +
Sbjct: 139 IVHSVLWPLALACHAGFRAVPPTLRMAGRNIGLTGPSYVVGLLIPAALPSILSGLRLGWA 198

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+EM+          G+G +I +   + +   +   +LT++ +    +  +F
Sbjct: 199 FAWRTLIAAEMVFGASA--REGGLGWFIFVNRSQLETANVFAGLLTVILIGLAVESFVF 255



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 81/266 (30%), Gaps = 12/266 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                         R   ++ +    ++          S+       T   +   +  G 
Sbjct: 6   LSTSARPAPFTLGPRARRLVILVGLALIWESYARWLGNSLLLPSFLETLGALRENLRNGE 65

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +       L I+ +   I +G+               S +     +    PA    P+ +
Sbjct: 66  LPERVRASLGILLTGYGIGIGVAAIITALAALSRWGESLLGLLTAMFNPLPAIALLPVAL 125

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    L  +++    W +     AG  A P   +    +  +TG  +   ++
Sbjct: 126 LWFGVGASS----LVFVIVHSVLWPLALACHAGFRAVPPTLRMAGRNIGLTGPSYVVGLL 181

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++G       AW   I +E+        R  GLG +I  +  +     V  G
Sbjct: 182 IPAALPSILSGLRLGWAFAWRTLIAAEMVFGA--SAREGGLGWFIFVNRSQLETANVFAG 239

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L +    LA+  F++  L     + 
Sbjct: 240 LLTVILIGLAVESFVFATLNRLTVQR 265


>gi|146296643|ref|YP_001180414.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410219|gb|ABP67223.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 238

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + +     LD + L      TT RM+   +ISL+   +      K   L   L P
Sbjct: 19  PSPVSVAETFIRLLDNNVLFIAIWATTKRMVIGYLISLIAGIILGLSIVKFGFLDRNLRP 78

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q++P + +L F ++++          +E A IF      ++++T ++   + N+ 
Sbjct: 79  LILGFQTLPSVCWLPFAILWYGL--------SEKAIIFVTAIGSLFSITLAVESGIKNVN 130

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +++    G   +  + +P S+P ++  M    S  +  ++A EM+         
Sbjct: 131 PLYIKAAKTMGAKGITLYLNVIIPASLPYIISGMKQGWSFAFRALMAGEML------FAT 184

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+  +    + ++ +F P+
Sbjct: 185 KGLGQVLMVGRDLADMSQVISVMIVTIIFGLVVEKAIFGPL 225



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T  R+V+  +I+ I  I +G+ I     +   ++P        P+  + P  +
Sbjct: 37  LFIAIWATTKRMVIGYLISLIAGIILGLSIVKFGFLDRNLRPLILGFQTLPSVCWLPFAI 96

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  +   G+ + I   V +G       + + A +    G   +  +I
Sbjct: 97  LWYGLSEK----AIIFVTAIGSLFSITLAVESGIKNVNPLYIKAAKTMGAKGITLYLNVI 152

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY ++G       A+ A +  E+         T GLG  +    +     +V+  
Sbjct: 153 IPASLPYIISGMKQGWSFAFRALMAGEML------FATKGLGQVLMVGRDLADMSQVISV 206

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +++   F L + + ++ PL
Sbjct: 207 MIVTIIFGLVVEKAIFGPL 225


>gi|222149405|ref|YP_002550362.1| ABC transporter membrane spanning protein (proline/glycine betaine)
           [Agrobacterium vitis S4]
 gi|221736388|gb|ACM37351.1| ABC transporter membrane spanning protein (proline/glycine betaine)
           [Agrobacterium vitis S4]
          Length = 281

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 15/200 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +  + T   +L++  + +L       LAA+   +  ++ P+LD+MQ+IP   +L   ++ 
Sbjct: 91  KETTETLALVLASTAVCMLIGVPLGILAARRAWIYALMRPVLDLMQTIPTFVYLIPALIL 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G V G     IFA+ +             + + P  L E + +F  +  Q    
Sbjct: 151 FGL---GMVPGLIATVIFAVPSP-----IRLTRLGIVSTPSSLVEAAVAFGATPTQVLRK 202

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P+++P ++  +  ++      VV + ++          G+G  +  A+   ++    
Sbjct: 203 VELPYALPQIMAGLTQTIMLSLSMVVIAALVGAA-------GLGVPVVRALNTVNIARGF 255

Query: 243 YAMLTMLGVIFLYDQLLFRP 262
            A L ++ +  + D++   P
Sbjct: 256 EAGLCIVILAIILDRMFRIP 275



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 11/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+    +  +I +P+GI    R  I + ++P   L+   P  V+    +  +  + 
Sbjct: 96  TLALVLASTAVCMLIGVPLGILAARRAWIYALMRPVLDLMQTIPTFVYL---IPALILFG 152

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L     L   +IF     I      G  + P+   E A +F  T  +  R + LP   P 
Sbjct: 153 LGMVPGLIATVIFAVPSPIRL-TRLGIVSTPSSLVEAAVAFGATPTQVLRKVELPYALPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       + +  +++ +           GLG  +  +    +        L +   
Sbjct: 212 IMAGLTQTIMLSLSMVVIAALVG-------AAGLGVPVVRALNTVNIARGFEAGLCIVIL 264

Query: 566 VLALNRFLWHP 576
            + L+R    P
Sbjct: 265 AIILDRMFRIP 275


>gi|257057390|ref|YP_003135222.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256587262|gb|ACU98395.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 256

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 10/193 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +     ++   ++ + IA +I IP+G+ +G  P +    +   + L   P+    PLV+
Sbjct: 51  FLRDVIASVLAWLIALGIAIVIAIPLGLVLGNFPLVRMATRSIVEFLRPIPSVALIPLVL 110

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             L ++   W IL+N I           + A S  +        + 
Sbjct: 111 VVIGGGP----EAKITLAVYAAVWPILYNTIYAFDEIDPLLIDTARSCGVHKSGILTTVA 166

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVL 557
           LP   P+  TG   +        + +E  +  ++     GLG++I ++    G    V+ 
Sbjct: 167 LPHAAPFVFTGIRISASVGLIVIVSTEFIAGANV-----GLGSFILKAAHGAGRTDLVLA 221

Query: 558 GVLIMCCFVLALN 570
           G ++        N
Sbjct: 222 GTVVAGVIGYLAN 234



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 14/241 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLR 71
           R +  N   L+AF+L+  ++  L    +E   P  +V      L    +  +    + L 
Sbjct: 2   RSLVRNFAGLIAFLLLWELVVRLGVIAEEDVPPASVVLTRIAELFGQEAFLRDVIASVLA 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L A+ I+++       +      + M    I++ ++ IP +  +   +V          
Sbjct: 62  WLIALGIAIVIAIPLGLVLGNFPLVRMATRSIVEFLRPIPSVALIPLVLVVIG------- 114

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G   A I     + VW + ++   +   I   L + +RS  +        + +P + P 
Sbjct: 115 -GGPEAKITLAVYAAVWPILYNTIYAFDEIDPLLIDTARSCGVHKSGILTTVALPHAAPF 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +S S G   +V++E I   +      G+GS+I  A        ++ A   + GV
Sbjct: 174 VFTGIRISASVGLIVIVSTEFIAGANV-----GLGSFILKAAHGAGRTDLVLAGTVVAGV 228

Query: 252 I 252
           I
Sbjct: 229 I 229


>gi|332654299|ref|ZP_08420043.1| proline/glycine betaine ABC transporter permease [Ruminococcaceae
           bacterium D16]
 gi|332517385|gb|EGJ46990.1| proline/glycine betaine ABC transporter permease [Ruminococcaceae
           bacterium D16]
          Length = 508

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                 ++ A++ +L+       L+    R G +++ ++D++Q+ P L  L   +V+   
Sbjct: 3   FEHLSMVIVALLFALIAGVPLGVLSYFYPRTGKIILRVVDLIQTTPALALLGIIMVFMGA 62

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P  ++G  L          +  +  +    L  +P  L+E +    ++   +   + +
Sbjct: 63  GKPTVIVGLAL--------YSLLPIVRNTVLGLNQVPSALKEAATGMGMTRMYQLRRVEI 114

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + ++        V + M+  G          + I   I++ D+ AIL   
Sbjct: 115 PLAAPIIFTGVRIAAVNAIGTAVFAAMVGGGGLG-------NIINTGIRQNDMKAILSGT 167

Query: 246 LTMLGVIFLYDQLL 259
             ++ +  + D ++
Sbjct: 168 GVLMAMALILDLVM 181



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+V ++ A I  +P+G+   F P     I     L+   PA     +++  +     
Sbjct: 6   LSMVIVALLFALIAGVPLGVLSYFYPRTGKIILRVVDLIQTTPALALLGIIMVFMGAGKP 65

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      I+ N + G +  P+  KE A+   +T     R + +P   P  
Sbjct: 66  TVIVGLALYSLL----PIVRNTVLGLNQVPSALKEAATGMGMTRMYQLRRVEIPLAAPII 121

Query: 507 VTGAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            TG   A   A   ++ + +   G +  +  TG+         +     ++ G  ++   
Sbjct: 122 FTGVRIAAVNAIGTAVFAAMVGGGGLGNIINTGI--------RQNDMKAILSGTGVLMAM 173

Query: 566 VLALN 570
            L L+
Sbjct: 174 ALILD 178


>gi|229018099|ref|ZP_04174974.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1273]
 gi|229024280|ref|ZP_04180739.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1272]
 gi|228737055|gb|EEL87591.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1272]
 gi|228743190|gb|EEL93315.1| Glycine betaine transport system permease protein opuAB [Bacillus
           cereus AH1273]
          Length = 252

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 105/235 (44%), Gaps = 16/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +++I +  ++ +  ++ ++    +  +   L+++       +T   +L++++IS++  
Sbjct: 25  AILMIILLCFLIWYTTRKLSLVIFTLIGLLFILNINY-WAQTMQTLALVLTSVIISIIIG 83

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA+++ R    L P LD MQ++P   +L   + +F     G V G   + IFA+ 
Sbjct: 84  IPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGV---GVVPGIIASVIFAMP 140

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                         +  +P DL E + +F  +  QK + + +P +   ++  +  S+   
Sbjct: 141 -----PTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLS 195

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              VV + ++         PG+G  +  ++ + ++     A L ++ +  + D++
Sbjct: 196 LSMVVTASLV-------GAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 243



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 81/236 (34%), Gaps = 17/236 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVI-----WLGCITMFRVVVLIII 396
            L I    ++  +   + W +   + +  FT   +L+++          T+  V+  +II
Sbjct: 19  FLTIIPAILMIILLCFLIWYTTRKLSLVIFTLIGLLFILNINYWAQTMQTLALVLTSVII 78

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + II IP+GI        S  ++P    +   PA V+    ++      +   +   +  
Sbjct: 79  SIIIGIPIGILASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIASVIF- 137

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                   +     G    P D  E A++F  T  +    + LP      + G   +   
Sbjct: 138 ---AMPPTIRFTDLGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 194

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  + + +           GLG  +  S  + +        L +    + L+R 
Sbjct: 195 SLSMVVTASLVG-------APGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 243


>gi|94986501|ref|YP_594434.1| nitrate ABC transporter, permease protein (nrtB-1) [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94730750|emb|CAJ54112.1| nitrate ABC transporter, permease protein (nrtB-1) [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 252

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W      +   I       ++  +        +    I++ R+ V + +A     
Sbjct: 13  IIVVLWKIGSIIIGENILPNPTKVLIYFYNSLKTKLFLTHAGISILRISVAMALAWFTAF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P G+ +G +  + +   P   L    P  V  P+ ++              LL+   T +
Sbjct: 73  PFGLLLGTKHLVDTIFSPIIFLTYPIPKIVLLPIFLTLFGLG----ESPKILLITLTTGY 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL    A A      +++   S   T  +  +++I+P   P  +     + G A     
Sbjct: 129 QILIATRASALNIDKKYRDSFRSIGGTPSQELQHVIIPATLPNALVALKISSGTATAVLF 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + E  +        +GLG  I +   +G+  ++  G+L M    + L+ F 
Sbjct: 189 MVESFA------TQSGLGFLIMDGWGRGNMLQMYTGILAMSLLGMGLHEFF 233



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 86/247 (34%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++V+  I  ++ G      P  ++     +L       +A  + LR+  AM ++   
Sbjct: 11  IVIIVVLWKIGSIIIGENILPNPTKVLIYFYNSLKTKLFLTHAGISILRISVAMALAWFT 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F +  L      +  +  PI+ +   IP +  L   +  F           E   I  I
Sbjct: 71  AFPFGLLLGTKHLVDTIFSPIIFLTYPIPKIVLLPIFLTLFGLG--------ESPKILLI 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  +   S  NI +   +  RS   +  Q+  ++ +P ++P  +  + +S   
Sbjct: 123 TLTTGYQILIATRASALNIDKKYRDSFRSIGGTPSQELQHVIIPATLPNALVALKISSGT 182

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               +   E            G+G  I       ++L +   +L M  +     +    +
Sbjct: 183 ATAVLFMVESFA------TQSGLGFLIMDGWGRGNMLQMYTGILAMSLLGMGLHEFFNAI 236

Query: 260 FRPMIVW 266
            R +  W
Sbjct: 237 ERYLCRW 243


>gi|307322586|ref|ZP_07601926.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306891759|gb|EFN22605.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 207

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 82/208 (39%), Gaps = 13/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +W   ++++RV+V   +A++I +P+G+ +G      S ++P+       PA  F PL+V
Sbjct: 7   FVWDIAVSIYRVLVGFCLAALIAVPIGLIMGSVQFFRSLLEPWLAFTRYMPATAFIPLLV 66

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +             ++  GT + +   V+A     P    E A       W+    +I
Sbjct: 67  LWLGIDDTQK----FSVIFVGTFFTLALMVMASTLTVPVALIEAAIMLGAKPWQLIFDVI 122

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P          G AW   +++E+ +       ++G G  I  ++       + +G
Sbjct: 123 LPAAKPAIFNDLRIVLGWAWTYIVIAEIVA------ASSGAGYVILNASRFMDTATIFVG 176

Query: 559 VLIMCCFVLALNRFL---WHPLYLYGTR 583
           ++ +    L  +         L+ Y  R
Sbjct: 177 IISIGLIGLISDLLFNAAGRRLFPYLQR 204



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L    ++ L       +    +    +L P L   + +P   F+   V++     
Sbjct: 14  SIYRVLVGFCLAALIAVPIGLIMGSVQFFRSLLEPWLAFTRYMPATAFIPLLVLWLGIDD 73

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K           IF    + +   +  S   +P  L E +       WQ  + + +P 
Sbjct: 74  TQKFS--------VIFVGTFFTLALMVMASTLTVPVALIEAAIMLGAKPWQLIFDVILPA 125

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +  ++ + +   W ++V +E++          G G  I  A +  D   I   +++
Sbjct: 126 AKPAIFNDLRIVLGWAWTYIVIAEIVAASS------GAGYVILNASRFMDTATIFVGIIS 179

Query: 248 MLGVIFLYDQLL 259
           +  +  + D L 
Sbjct: 180 IGLIGLISDLLF 191


>gi|282918514|ref|ZP_06326251.1| ABC transporter permease [Staphylococcus aureus subsp. aureus C427]
 gi|282317648|gb|EFB48020.1| ABC transporter permease [Staphylococcus aureus subsp. aureus C427]
          Length = 504

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A++I+         L  K++ +  +++ I  I+Q+IP L  L   +  F         
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E ++   +  +++   + +P +MP +
Sbjct: 81  --RVPAIIALVVYALLPILRNTYTGIKEVDLSLIEAAKGIGMKPFRRLTKVELPIAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   +   IL   + 
Sbjct: 139 MAGVRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNASLILLGAIP 186

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
              +  ++D L+ R M   S K
Sbjct: 187 AALLAIIFD-LILRFMAKLSYK 207



 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA+ I +P+GI +     IS  +   A +L   P+     L++       +   +
Sbjct: 27  FIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIKEVDLSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNNASLILLGAIPAALLAIIFD 195

Query: 571 RFLWHPLYLYGTRCL 585
             +   +     + L
Sbjct: 196 -LILRFMAKLSYKKL 209


>gi|33602004|ref|NP_889564.1| putative permease of ABC transporter [Bordetella bronchiseptica
           RB50]
 gi|33576442|emb|CAE33520.1| putative permease of ABC transporter [Bordetella bronchiseptica
           RB50]
          Length = 257

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 94/252 (37%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+    +  +L  + +      +L       VP     +V   L   S  Q    T  R
Sbjct: 10  ARKHLAGVLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVE-DLGQASFHQSLLGTLGR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++          
Sbjct: 69  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 122 -FGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPE 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 235

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 236 AALIDQFVLENL 247



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 17/246 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--------CITMFRVV 391
             ++  +     +  +    AW    +++          V  LG          T+ R+ 
Sbjct: 11  RKHLAGVLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLG 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A    I  G+           ++    +L + P+  + PL +  + +     N  
Sbjct: 71  AGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTP 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + +++     +    +V+    +        A     T W   + + LP + P  +TGA 
Sbjct: 127 IIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQ 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A G AW A I +E+           GLG  +A S E      V+  +L++      +++
Sbjct: 187 LAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQ 241

Query: 572 FLWHPL 577
           F+   L
Sbjct: 242 FVLENL 247


>gi|33597601|ref|NP_885244.1| putative permease of ABC transporter [Bordetella parapertussis
           12822]
 gi|33574029|emb|CAE38352.1| putative permease of ABC transporter [Bordetella parapertussis]
          Length = 257

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 94/252 (37%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+    +  +L  + +      +L       VP     +V   L   S  Q    T  R
Sbjct: 10  ARKHLAGVLGVLFILALWQAAAWVLPDFVMPGVPTVAQRLVE-DLGQASFHQSLLGTLGR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++          
Sbjct: 69  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 122 -FGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPE 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 235

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 236 AALIDQFVLENL 247



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 17/246 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--------CITMFRVV 391
             ++  +     +  +    AW    +++          V  LG          T+ R+ 
Sbjct: 11  RKHLAGVLGVLFILALWQAAAWVLPDFVMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLG 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A    I  G+           ++    +L + P+  + PL +  + +     N  
Sbjct: 71  AGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTP 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + +++     +    +V+    +        A     T W   + + LP + P  +TGA 
Sbjct: 127 IIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQ 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A G AW A I +E+           GLG  +A S E      V+  +L++      +++
Sbjct: 187 LAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQ 241

Query: 572 FLWHPL 577
           F+   L
Sbjct: 242 FVLENL 247


>gi|294790449|ref|ZP_06755607.1| choline transporter [Scardovia inopinata F0304]
 gi|294458346|gb|EFG26699.1| choline transporter [Scardovia inopinata F0304]
          Length = 507

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 20/196 (10%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++ +   A      ++    ++ +  I Q+IP L  L   + +             + A
Sbjct: 33  AIVISIPLAIWLYNKKKAAEAILQVTGIFQTIPSLALLGLLIPFMGIG--------TVPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +       L  I  +L E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  VTALVIYALFPIVQGTITGLQGIDPNLVEAGTAFGMTSWERLRKYELPLAMPVIIAGVRT 144

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S          + +I  G       G+G +I L I   +   IL   ++   +       
Sbjct: 145 SAVMIIGTATLASLIGAG-------GLGDFILLGIDRNNNSLILIGAISSALLAI----- 192

Query: 259 LFRPMIVWSNKFRLER 274
           LF  +I W  K  L++
Sbjct: 193 LFSAVIRWLEKKSLKK 208



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 11/173 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+ IW+  +   +  I     +    P+     L++  +    +     L +  
Sbjct: 33  AIVISIPLAIWLYNKKKAAEAILQVTGIFQTIPSLALLGLLIPFMGIGTVPAVTALVIY- 91

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                + I+   I G      +  E  ++F +T W   R   LP   P  + G  T+   
Sbjct: 92  ---ALFPIVQGTITGLQGIDPNLVEAGTAFGMTSWERLRKYELPLAMPVIIAGVRTSAVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               + ++ +   G       GLG +I    ++ +   +++G +      +  
Sbjct: 149 IIGTATLASLIGAG-------GLGDFILLGIDRNNNSLILIGAISSALLAILF 194


>gi|260177212|gb|ACX33935.1| hypothetical ABC transporter permease protein [uncultured
           prokaryote AT5]
          Length = 230

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 10/195 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    ++  RV V     + + I +G+  G    +S+ + P  QLL   P   F P+
Sbjct: 33  GTLMLDLGMSTMRVAVGFFTGAAVAILIGLLTGRYAIVSNFLTPIFQLLRPIPPIAFVPI 92

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+                L+ +G  + +      G           A S  ++     R 
Sbjct: 93  VILWFGLA----EWRKWFLVFWGVFFTVWVATHLGVQRADPALIRAAHSLGVSDRLLIRD 148

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P    G  TA   ++   + +E+A          GL   I  + +     +++
Sbjct: 149 VIFPSALPTIFVGLRTAISISFYTLVAAELAG------AFAGLAYRIDLAHQNMQTSQML 202

Query: 557 LGVLIMCCFVLALNR 571
            G++++       +R
Sbjct: 203 GGLVMLGLVSALADR 217



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 84/228 (36%), Gaps = 17/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +   +       +L      +T+R+            +   L  +   +   L P
Sbjct: 17  PPPTAVGAALWDEFVNGTLMLDLGMSTMRVAVGFFTGAAVAILIGLLTGRYAIVSNFLTP 76

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I  +++ IP + F+   +++F          AE    F +F    + +  + +  +    
Sbjct: 77  IFQLLRPIPPIAFVPIVILWFGL--------AEWRKWFLVFWGVFFTVWVATHLGVQRAD 128

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   + S  +S       +  P ++P +   +  ++S  ++ +VA+E+          
Sbjct: 129 PALIRAAHSLGVSDRLLIRDVIFPSALPTIFVGLRTAISISFYTLVAAELAG------AF 182

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
            G+   I LA +      +L  ++ +  V  L D+   +L R ++ WS
Sbjct: 183 AGLAYRIDLAHQNMQTSQMLGGLVMLGLVSALADRGFAMLSRRLVWWS 230


>gi|302387734|ref|YP_003823556.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302198362|gb|ADL05933.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 260

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 11/246 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +          +  +  + W      V   I       ++N    Q  +   W    + F
Sbjct: 2   KPTAPPYKKAAIILLWLLAWQAASLSVDNSIIMVGPMEVINALWNQAAMPGFWKTIFSSF 61

Query: 389 -RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            ++ +  ++A    I  G      P     ++P   L+ + P   F  L +  V   +L+
Sbjct: 62  GKISLGFLLAFWTGILTGGAACRFPLFKDFLEPLMSLIKSVPVASFVILALIWVGSGNLS 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             ++++ L++F     I  N +AG ++      E+A +FH+ G +   YI  P + PY +
Sbjct: 122 --VFIAFLVVFPI---IYINTMAGFTSTDPKLLEMARTFHMQGGKKLFYIYRPALMPYLI 176

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   A G  W + + +EV    +  +      A I  ST      ++    L++     
Sbjct: 177 SGCRVALGMGWKSGVAAEVIGVPNHSIGEKLYMAKIYLSTA-----DLFAWTLVIIVVSA 231

Query: 568 ALNRFL 573
              +F 
Sbjct: 232 LFEKFF 237



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 97/239 (40%), Gaps = 14/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L ++L     ++ +        P ++++ +     +    +    +  ++    +++  
Sbjct: 14  ILLWLLAWQAASLSVDNSIIMVGPMEVINALWNQAAMPGFWKTIFSSFGKISLGFLLAFW 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A +       L P++ +++S+P+  F+   +++         +G+   ++F 
Sbjct: 74  TGILTGGAACRFPLFKDFLEPLMSLIKSVPVASFVILALIW---------VGSGNLSVFI 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +  +      +    L E++R+F + G +K +Y+  P  MP L+    +++ 
Sbjct: 125 AFLVVFPIIYINTMAGFTSTDPKLLEMARTFHMQGGKKLFYIYRPALMPYLISGCRVALG 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            GW   VA+E+I V +       IG  + +A        +    L ++ V  L+++   
Sbjct: 185 MGWKSGVAAEVIGVPNHS-----IGEKLYMAKIYLSTADLFAWTLVIIVVSALFEKFFL 238


>gi|226325516|ref|ZP_03801034.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758]
 gi|225206259|gb|EEG88613.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758]
          Length = 241

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 100/251 (39%), Gaps = 19/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +++   + +    +++   P     +  I  D   L +    +   + +   I  +
Sbjct: 2   IILVIMLYDFLTVKTAILKQPFFPCVNTVLCAIIDDRALLLKSTLYSLRLLFTGYFIGAI 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       S+R+   + PI+ ++  IP   ++   +V   +L+ G        ++F 
Sbjct: 62  LGLITGVACGYSKRINYWVSPIIKMLGPIPSTTWIPIIMVLVSSLFKG--------SVFI 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T +    + N+ +   E +R+    G Q  + + +P +MP ++  M   MS
Sbjct: 114 IALGVWFALTIASSTGIQNVDKAYLEAARTLGAKGHQLVFRVAIPHAMPNILQGMTQGMS 173

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIA----LAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                ++ +EM+          G+G YI      AI  +   AI+   L    V F+ + 
Sbjct: 174 SACTALLVAEMMG------AEAGLGWYIQWQKSWAIYSKMYAAIVLICLIFTAVTFILN- 226

Query: 258 LLFRPMIVWSN 268
           ++ R ++ W  
Sbjct: 227 VIKRIVLRWQE 237



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 10/191 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++     ++  +     I +I+ +  G+  G+   I+  + P  ++L   P+  + 
Sbjct: 37  DRALLLKSTLYSLRLLFTGYFIGAILGLITGVACGYSKRINYWVSPIIKMLGPIPSTTWI 96

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+++  VS            ++  G  + +      G       + E A +    G +  
Sbjct: 97  PIIMVLVSSLFKG----SVFIIALGVWFALTIASSTGIQNVDKAYLEAARTLGAKGHQLV 152

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  + G       A  A +V+E+           GLG YI        + +
Sbjct: 153 FRVAIPHAMPNILQGMTQGMSSACTALLVAEMMG------AEAGLGWYIQWQKSWAIYSK 206

Query: 555 VVLGVLIMCCF 565
           +   ++++C  
Sbjct: 207 MYAAIVLICLI 217


>gi|311108941|ref|YP_003981794.1| binding-protein-dependent transporter inner membrane component
           family protein 65 [Achromobacter xylosoxidans A8]
 gi|310763630|gb|ADP19079.1| binding-protein-dependent transport system inner membrane component
           family protein 65 [Achromobacter xylosoxidans A8]
          Length = 256

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W   +    +          V    + D  ++     +T    +   +++  + I
Sbjct: 14  GVLLLWHVSIPLFGLPAYLLPPPLSVLERLWTDSAFLGHHSWVTSVETLGGFLLSIAVGI 73

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI + +   +   I P   +  AFP     PL++               L+      +
Sbjct: 74  PLGIVLVWSRPLERAIMPLLVVSQAFPKVAVAPLIIIWFGLG----LFPKILIAFSVAFF 129

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ + +AG  +   D  ++A S      R +  I LP   P   +G   A   A   ++
Sbjct: 130 PIVVSTVAGMRSVDADLNDLARSMRAGALRTFLRIRLPYALPQIFSGLKVAIAFATVGAV 189

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V E           +GLG  +  +        +   ++ +    L     +
Sbjct: 190 VGEWVG------AESGLGYVLLSANANLDTTLLFAVLVALMLIGLVFYYLV 234



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 109/255 (42%), Gaps = 17/255 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           VL++  ++I L G+    +P  +  +  +  D   L  ++  T++  L   ++S+     
Sbjct: 15  VLLLWHVSIPLFGLPAYLLPPPLSVLERLWTDSAFLGHHSWVTSVETLGGFLLSIAVGIP 74

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +   SR L   ++P+L + Q+ P +      +++F      K++ A   A F     
Sbjct: 75  LGIVLVWSRPLERAIMPLLVVSQAFPKVAVAPLIIIWFGLGLFPKILIAFSVAFF----- 129

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  S    + ++  DL +++RS R    + F  + +P+++P +   + ++++   F
Sbjct: 130 ---PIVVSTVAGMRSVDADLNDLARSMRAGALRTFLRIRLPYALPQIFSGLKVAIA---F 183

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRP 262
             V +   VVG+ V    G+G  +  A    D   +   ++ ++ +  ++  L+    R 
Sbjct: 184 ATVGA---VVGEWVGAESGLGYVLLSANANLDTTLLFAVLVALMLIGLVFYYLVEFSERF 240

Query: 263 MIVWSNKFRLERTTG 277
           +I W    R +    
Sbjct: 241 LIPWHISVRSDALPS 255


>gi|217978809|ref|YP_002362956.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217504185|gb|ACK51594.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 346

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 14/249 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR+ P +  L     +  ++      + +   P     +   T D   L +    +    
Sbjct: 97  RRLTPWLCALGIAFSIWELLAAKTGVLPQPFFPPPQAILEVFTDDYAKLAESVLASVKLE 156

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L          F+       SRR G  + P+L ++  +P   +L      F         
Sbjct: 157 LLGFAFGASAGFLIGVWLGWSRRFGYWVHPVLRLIGPLPATAWLPIAFFAF--------P 208

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +  A+IF I  +  + +       + ++     +V+R+     W   W + VP ++P +
Sbjct: 209 SSWSASIFLIGLTTGFPVAVLTSSGVSSVNTAYYDVARTLGAGRWFLVWRVAVPAALPHV 268

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M +S  +  +V +EM+ V        G+G Y+  A        +  A+L M  + 
Sbjct: 269 FVGLFMGLSASFAVLVTAEMMGVKA------GLGFYLQWAQSWASYANMYAALLVMSAMC 322

Query: 253 FLYDQLLFR 261
                LLF+
Sbjct: 323 AGLITLLFK 331



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 10/236 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I+         +   +      +      D   +      ++   ++     + 
Sbjct: 106 LGIAFSIWELLAAKTGVLPQPFFPPPQAILEVFTDDYAKLAESVLASVKLELLGFAFGAS 165

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
               +G+W+G+       + P  +L+   PA  + P+          +       L+   
Sbjct: 166 AGFLIGVWLGWSRRFGYWVHPVLRLIGPLPATAWLPIAFFAFP----SSWSASIFLIGLT 221

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + +     +G S+    + +VA +     W     + +P   P+   G       ++ 
Sbjct: 222 TGFPVAVLTSSGVSSVNTAYYDVARTLGAGRWFLVWRVAVPAALPHVFVGLFMGLSASFA 281

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             + +E+           GLG Y+  +    S+  +   +L+M      L   L+ 
Sbjct: 282 VLVTAEMMG------VKAGLGFYLQWAQSWASYANMYAALLVMSAMCAGLITLLFK 331


>gi|170735886|ref|YP_001777146.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169818074|gb|ACA92656.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 280

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 14/198 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +VD++        L ++   +  R+L       L           SR L   ++
Sbjct: 60  LPPPERVVDMLAELASSGDLVRHTLISLQRVLVGFAAGTLLGVSIGVALGLSRTLEAYVL 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K +         I  + +  +T S  Q     
Sbjct: 120 PSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------LIAHAALVPVTLSTLQGFRQT 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 172 PPALDEVARGFGYTRRQRIVHVVLPAAIPTLATGVRLAFTKSWLALVVVELVASSE---- 227

Query: 222 LPGIGSYIALAIKEQDLL 239
             G+G  I    +   L 
Sbjct: 228 --GLGYLIVYGRQLFQLD 243



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 93/255 (36%), Gaps = 18/255 (7%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------Y 378
                 L+  + Q   ++L    F +   V     W +   +       D+L        
Sbjct: 20  PRRSAALKRLAWQLAPWVLPALLFALWS-VGSARGWIAPQILPPPERVVDMLAELASSGD 78

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++ RV+V     +++ + +G+ +G    + + + P    L   P   + P ++
Sbjct: 79  LVRHTLISLQRVLVGFAAGTLLGVSIGVALGLSRTLEAYVLPSFNALVQIPVLGWLPFLL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V            LL+       +  + + G    P    EVA  F  T  +   +++
Sbjct: 139 LLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPPALDEVARGFGYTRRQRIVHVV 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   A   +W A +V E+ +       + GLG  I    +      V+  
Sbjct: 195 LPAAIPTLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAA 248

Query: 559 VLIMCCFVLALNRFL 573
           V+++    L +NR L
Sbjct: 249 VVVVGAVGLLINRAL 263


>gi|163738160|ref|ZP_02145576.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Phaeobacter gallaeciensis BS107]
 gi|161388776|gb|EDQ13129.1| glycine betaine/proline ABC transporter, permease protein, putative
           [Phaeobacter gallaeciensis BS107]
          Length = 179

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 73/182 (40%), Gaps = 15/182 (8%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++ +L    +     KS+R   V  P+LD MQ++P   +L   + +F    P  V+    
Sbjct: 1   MLCILIGVPFGIWFGKSKRAYAVAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVL---- 56

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
               A     +  +       +  +P   +E + +F  S  Q  + + +P ++P ++  +
Sbjct: 57  ----ATLIFAMPPVIRLTALGMRGVPDATKEAAIAFGCSRRQLLFNVELPLALPSIMTGI 112

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++      VV + +I          G+G+ I  +++       L   L +L    + D
Sbjct: 113 NQTILMSLSMVVIASLI-------GADGLGALILESLQYAAKGQGLLGGLAILLCAMVID 165

Query: 257 QL 258
           ++
Sbjct: 166 RI 167



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++  +I +P GIW G      +  +P    +   PA V+   +++          L   +
Sbjct: 1   MLCILIGVPFGIWFGKSKRAYAVAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLI 60

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                    ++     G    P+  KE A +F  +  +    + LP   P  +TG     
Sbjct: 61  F----AMPPVIRLTALGMRGVPDATKEAAIAFGCSRRQLLFNVELPLALPSIMTGINQTI 116

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + +  +++ +           GLGA I ES +  +  + +LG L +    + ++R 
Sbjct: 117 LMSLSMVVIASLIG-------ADGLGALILESLQYAAKGQGLLGGLAILLCAMVIDRI 167


>gi|323526143|ref|YP_004228296.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323383145|gb|ADX55236.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 274

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   V+   + + I + VG+W+   P  S+   P+ +   + P  +
Sbjct: 64  WFTSGEIYLHLWITLLETVLAFALGTGIGLGVGLWLALSPLASALFDPYIKAANSMPRVI 123

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G           A      G +
Sbjct: 124 LAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANGKQ 179

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ LP    +  +   T+ G A+  S+V E            G+G  I ++      
Sbjct: 180 LLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDI 233

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V  G+L++  F L L+  +
Sbjct: 234 NTVFAGILVLTAFALILDAIV 254



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ ++  +        +  +   T L  + A  +            A S     +  P +
Sbjct: 54  PQKVLQRIWEWFTSGEIYLHLWITLLETVLAFALGTGIGLGVGLWLALSPLASALFDPYI 113

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               S+P +       V+F      KV        F +F        F++YQ +  +   
Sbjct: 114 KAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPV 165

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R    +G Q   Y+ +P +M  +  ++  S+   +   V  E +          G
Sbjct: 166 VLANARMLGANGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARG 219

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +G  I  A    D+  +   +L +     + D ++    R ++ W  K
Sbjct: 220 VGYLILQAEGTFDINTVFAGILVLTAFALILDAIVGMGERHLMKWQPK 267


>gi|258646867|ref|ZP_05734336.1| choline transporter [Dialister invisus DSM 15470]
 gi|260404306|gb|EEW97853.1| choline transporter [Dialister invisus DSM 15470]
          Length = 503

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 23/188 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LSA++ ++  +     L ++ +     ++ I  I+Q+IP L  L   + +          
Sbjct: 29  LSALLAAIFISIPLGILLSRKKSYAETVLQITGIIQTIPSLAILGLMIPFLGIG------ 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  +    L  IP  L+E + +  ++ W+K     +  +MP +
Sbjct: 83  --TLPALTALIIYALFPILQNTITGLSEIPPVLDEAAEALGMNRWEKLKNYELALAMPVI 140

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAML--T 247
              +            AS MI+   T   +I   G+GS+I L I   D   IL       
Sbjct: 141 TSGIR----------TASVMIIGTATLAALIGAGGLGSFILLGIDHNDSALILIGAGSSA 190

Query: 248 MLGVIFLY 255
           +L +IF Y
Sbjct: 191 LLAIIFSY 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 67/191 (35%), Gaps = 13/191 (6%)

Query: 381 WLGCIT--MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           WL  +T  +   +  ++ A  I IP+GI +  +   +  +     ++   P+     L++
Sbjct: 17  WLLALTQHVQISLSALLAAIFISIPLGILLSRKKSYAETVLQITGIIQTIPSLAILGLMI 76

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L     L +       + IL N I G S  P    E A +  +  W   +   
Sbjct: 77  PFLGIGTLPALTALIIY----ALFPILQNTITGLSEIPPVLDEAAEALGMNRWEKLKNYE 132

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           L    P   +G  TA       + ++ +   G       GLG++I    +      +++G
Sbjct: 133 LALAMPVITSGIRTASVMIIGTATLAALIGAG-------GLGSFILLGIDHNDSALILIG 185

Query: 559 VLIMCCFVLAL 569
                   +  
Sbjct: 186 AGSSALLAIIF 196


>gi|302551427|ref|ZP_07303769.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302469045|gb|EFL32138.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 286

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 88/247 (35%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L +      L        P  +++      D  +LP     +  R  +   I L  
Sbjct: 48  VVLALWVVASAAGLLDPSAIPAPWTVLETGSRLWDAGTLPDDILTSLQRAATGFAIGLTG 107

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A  +  +R    ++   +++ ++IP LG +   +++       K+    +     I
Sbjct: 108 GILLALASGLTRTGEALIDGTVNLNRAIPTLGLIPLFILWLGIGETFKIAIIAIVVYIPI 167

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +         + + +L  I     E++    LS  Q    + +P ++PG    + + ++G
Sbjct: 168 Y--------LNTHAALSGIDSRFVELAEVQDLSKVQFIRQVVIPGALPGFFVGLRLGVTG 219

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259
            W  +V  E I          G+G  +  A        IL  ++       L D   +++
Sbjct: 220 SWLGLVVLEQI------NATSGLGYMMFQAQNYGQTDVILVGLVVYGVFGLLSDSAVRII 273

Query: 260 FRPMIVW 266
            R ++ W
Sbjct: 274 ERRVLSW 280



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           L + + +   + +  + V     +            +       D   +      ++ R 
Sbjct: 38  LPTTRLIGPAVVLALWVVASAAGLLDPSAIPAPWTVLETGSRLWDAGTLPDDILTSLQRA 97

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                I     I + +  G      + I     L  A P     PL +  +         
Sbjct: 98  ATGFAIGLTGGILLALASGLTRTGEALIDGTVNLNRAIPTLGLIPLFILWLGIGETFKIA 157

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++++       I  N  A  S   + F E+A    ++  ++ R +++PG  P +  G 
Sbjct: 158 IIAIVVYI----PIYLNTHAALSGIDSRFVELAEVQDLSKVQFIRQVVIPGALPGFFVGL 213

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                G+W   +V E  +       T+GLG  + ++   G    +++G+++   F L  +
Sbjct: 214 RLGVTGSWLGLVVLEQIN------ATSGLGYMMFQAQNYGQTDVILVGLVVYGVFGLLSD 267


>gi|115525198|ref|YP_782109.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
 gi|115519145|gb|ABJ07129.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
          Length = 268

 Score = 96.1 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 74/247 (29%), Gaps = 17/247 (6%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
                 +L     +   +      ++  +A          +          + + L    
Sbjct: 8   VRPRSWRLPRPDGLIQWIVPLLIILIWQLACSSGLVPTRVLPAPSDVVLAGWKLLLSGDL 67

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                ++ +R  V   I   I    G+  G     +       Q++   P     PLV+ 
Sbjct: 68  ARNIWVSFWRASVGFAIGGGIGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALIPLVIL 127

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          L+  G  + I  N + G         E+   + ++    +R II 
Sbjct: 128 WFGI----DEEAKLFLVALGVFFPIYLNTLHGIRTVDPQLIEMGRIYGMSNVELFRRIIF 183

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G   A G  W   IV+E  +       ++GLG    ++ E      VVL +
Sbjct: 184 PGALPSIFVGVRFALGIMWLTLIVAETIA------ASSGLGYMAMQAREFMLIDVVVLSI 237

Query: 560 LIMCCFV 566
           LI     
Sbjct: 238 LIYALLG 244



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 97/278 (34%), Gaps = 22/278 (7%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITL 56
            +  ++ P   R   P+        L+I +I  L         +    P D+V      L
Sbjct: 3   LVETLVRPRSWRLPRPDGLIQWIVPLLIILIWQLACSSGLVPTRVLPAPSDVVLAGWKLL 62

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L +    +  R      I     F +      S     +    L +++++P L  +
Sbjct: 63  LSGDLARNIWVSFWRASVGFAIGGGIGFAFGLANGLSSLSAKLSDTTLQMVRNVPHLALI 122

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F           E A +F +     + +  +    +  +   L E+ R + +S 
Sbjct: 123 PLVILWFGID--------EEAKLFLVALGVFFPIYLNTLHGIRTVDPQLIEMGRIYGMSN 174

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + F  +  P ++P +   +  ++   W  ++ +E I          G+G     A +  
Sbjct: 175 VELFRRIIFPGALPSIFVGVRFALGIMWLTLIVAETIAASS------GLGYMAMQAREFM 228

Query: 237 DLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            +  ++ ++L    +  + D   +LL R  + W   F+
Sbjct: 229 LIDVVVLSILIYALLGKVADSASRLLERLTLSWHPAFQ 266


>gi|146343742|ref|YP_001208790.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146196548|emb|CAL80575.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 287

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 91/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++    +       L          D +  +   +   ++P  A  +   +       + 
Sbjct: 44  IVVLAAIWQAYGSYLDNPLLFPTFSDTIAALWEKVRDGTIPMRAWTSLKVLFMGYAAGIT 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 104 LAAILTVLAISTRIGTDFLETVTAMFNPLPAIALLPLALIWFGLGSG--------SLVFV 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +    ++   L  V R++ L+G+     + +P +   ++  + +  +
Sbjct: 156 LIHSVLWPVALNTHSGFKSVSNTLRMVGRNYGLTGFSYVIRILIPAAFGAILTGLKIGWA 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I       ++ A+   +LT++ +  + + L+FR
Sbjct: 216 FAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENLIFR 273



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 6/190 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  + +       +   + +        +  ++    +    PA    PL +       
Sbjct: 90  SLKVLFMGYAAGITLAAILTVLAISTRIGTDFLETVTAMFNPLPAIALLPLALIWFGLGS 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  ++I    W +  N  +G  +  N  + V  ++ +TG+ +   I++P  F  
Sbjct: 150 GS----LVFVLIHSVLWPVALNTHSGFKSVSNTLRMVGRNYGLTGFSYVIRILIPAAFGA 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW   I +E+     +     GLG +I E+      P V  G+L +   
Sbjct: 206 ILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLEIPAVFAGLLTVILI 263

Query: 566 VLALNRFLWH 575
            L +   ++ 
Sbjct: 264 GLVVENLIFR 273


>gi|116629363|ref|YP_814535.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri ATCC
           33323]
 gi|238854212|ref|ZP_04644557.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri 202-4]
 gi|282850966|ref|ZP_06260340.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus gasseri 224-1]
 gi|311110982|ref|ZP_07712379.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Lactobacillus gasseri
           MV-22]
 gi|116094945|gb|ABJ60097.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri ATCC
           33323]
 gi|238833148|gb|EEQ25440.1| ABC-type proline/glycine betaine transport system, permease and
           substrate binding protein [Lactobacillus gasseri 202-4]
 gi|282557918|gb|EFB63506.1| ABC transporter, substrate-binding protein, QAT family
           [Lactobacillus gasseri 224-1]
 gi|311066136|gb|EFQ46476.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Lactobacillus gasseri
           MV-22]
          Length = 516

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 20/187 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+++     A +    +++    + I  I+Q+IP L  L   + +          
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKVAEFTLQIAGIIQTIPSLAILGLLLPFVGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  +  + Y  L +IP +LEE + +F L+ W+K   L +P +MP +
Sbjct: 82  --TTPAIIALVLYAIMPIFQNTYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMPMI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
              + +++      ++ +  +        L    +YI + I   +     + AIL A+L 
Sbjct: 140 FAGVRIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLA 192

Query: 248 MLGVIFL 254
           ++    L
Sbjct: 193 LVFSGVL 199



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA +I IP+   +     ++      A ++   P+     L++  V        +
Sbjct: 28  LIALLIAMVIAIPLAFILKGHKKVAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  +G +  P++ +E A++F +T W+  + + +P   P    G 
Sbjct: 88  ALVLYAIM----PIFQNTYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMPMIFAGV 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A        I +   +             YI       +  EV++G ++     L  +
Sbjct: 144 RIAL----VMIIGTATLAALIGGGGLG---TYIYVGINSNNNTEVLMGAILSALLALVFS 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|302539457|ref|ZP_07291799.1| nitrate ABC transporter, permease [Streptomyces sp. C]
 gi|302448352|gb|EFL20168.1| nitrate ABC transporter, permease [Streptomyces sp. C]
          Length = 295

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT-TLRM 72
           +  P +  +   +    ++ +          P   V      L           T   R 
Sbjct: 43  KALPPLTAVALVLTAWQVLALAEVTDDHMLPPPAAVWDSLADLWFKGTLFDVLWTSVWRG 102

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS  +++L+       L A+ R +   + P+L  +QS+P + ++   V++          
Sbjct: 103 LSGFLLALVIGTPLGLLVARVRFVRAAVGPVLSGLQSLPSVAWVPPAVLWLGLDNSMMYA 162

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                    I      ++   +   +  +P       RS   +G +   Y+ +P ++PG 
Sbjct: 163 --------VILLGATPSIANGLVSGIDQVPPLFLRAGRSLGATGLRGARYVVMPAALPGY 214

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +    +  W  ++A+E+I     +      G  +    +  D+  +  A++ +L V 
Sbjct: 215 LAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLESGRETSDMARVFLAIILILLVG 272

Query: 253 FLYDQLLFRP 262
              + L+F P
Sbjct: 273 IAVELLVFAP 282



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 86/219 (39%), Gaps = 12/219 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              W S+  +    T  DVL+       +++R +   ++A +I  P+G+ +     + + 
Sbjct: 76  AAVWDSLADLWFKGTLFDVLW------TSVWRGLSGFLLALVIGTPLGLLVARVRFVRAA 129

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    L + P+  + P  V  +       N  +  +++ G    I   +++G    P 
Sbjct: 130 VGPVLSGLQSLPSVAWVPPAVLWLGL----DNSMMYAVILLGATPSIANGLVSGIDQVPP 185

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            F     S   TG R  RY+++P   P Y+ G       +W + + +E+ +         
Sbjct: 186 LFLRAGRSLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGLGL 245

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           G    +    E      V L ++++    +A+   ++ P
Sbjct: 246 G--QLLESGRETSDMARVFLAIILILLVGIAVELLVFAP 282


>gi|152981719|ref|YP_001355226.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281796|gb|ABR90206.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 255

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 99/258 (38%), Gaps = 20/258 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+   +  ++ FVL+             T   P  +            L      + +  
Sbjct: 11  RVAYGVTGVVLFVLLWKASGFFAWVNPGTLPDPFKLPHAFMQEWTAGRLLPAIGSSLVHY 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              + +  LF   +   AA  R   ++   ++ I++ IP L ++ F + +F   + G   
Sbjct: 71  FWGLGLGTLFGIAFGLAAATIRPFELLQAYLIRILRPIPPLAWVVFAIAWFKVSHAG--- 127

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPG 191
                A F I     W   ++   ++ NI     E++RSF   S W++   + +P   PG
Sbjct: 128 -----AAFVISIGVFWINYYATASAVRNIDPRFYELARSFGQGSYWRRAVSITLPAIAPG 182

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +   +   W  ++A+E++ V       PG+G  +  A       A++  ML +  V
Sbjct: 183 TLAGIRTGIGQAWMTLIAAELLGV-------PGMGQEMNAAAGVGAYEAVVIYMLAISLV 235

Query: 252 IFLYDQ---LLFRPMIVW 266
             + D    L+ + ++ W
Sbjct: 236 YAISDLIYVLIEKRVLSW 253



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 76/240 (31%), Gaps = 14/240 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCIT 386
             F ++        +  + W        +        + + H   Q+     ++     +
Sbjct: 7   PWFTRVAYGVTGVVLFVLLWKASGFFAWVNPGTLPDPFKLPHAFMQEWTAGRLLPAIGSS 66

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + + ++  I  G+                ++L   P   +    ++     H 
Sbjct: 67  LVHYFWGLGLGTLFGIAFGLAAATIRPFELLQAYLIRILRPIPPLAWVVFAIAWFKVSHA 126

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH-ITGWRWWRYIILPGIFPY 505
                 + ++  G  W   +   +        F E+A SF   + WR    I LP I P 
Sbjct: 127 G----AAFVISIGVFWINYYATASAVRNIDPRFYELARSFGQGSYWRRAVSITLPAIAPG 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G  T  G AW   I +E+           G+G  +  +   G++  VV+ +L +   
Sbjct: 183 TLAGIRTGIGQAWMTLIAAELLG-------VPGMGQEMNAAAGVGAYEAVVIYMLAISLV 235


>gi|187478481|ref|YP_786505.1| ABC transporter permease [Bordetella avium 197N]
 gi|115423067|emb|CAJ49598.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 255

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 100/260 (38%), Gaps = 14/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+       +L  +L+  +   +L       VP  +  +        S  Q  + T +R+
Sbjct: 9   RKHLAGGLGVLFILLIWQVAAWILPDFLMPGVPTVLHRLTEEVGKP-SFHQSLTGTLMRL 67

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +   ++LL    +  +AA       VL   + I+QSIP + ++   ++           
Sbjct: 68  GAGYGLALLAGIGFGLIAALLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG-------- 119

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP L
Sbjct: 120 FGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATPWGLVKRVYLPAVMPEL 179

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    ++    W  ++++EM++         G+G  ++ + +  D+  ++  +L +  + 
Sbjct: 180 ITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLSYSGEIADMTGVMTNILVIAVLA 234

Query: 253 FLYDQLLFRPMIVWSNKFRL 272
            L DQL+   +     +++ 
Sbjct: 235 ALIDQLVLEKLKQRLLRYQY 254



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 86/239 (35%), Gaps = 22/239 (9%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-------------TMFRVVVLIIIAS 398
           +  + I + WQ   +I+  F    V  V+                  T+ R+     +A 
Sbjct: 16  LGVLFILLIWQVAAWILPDFLMPGVPTVLHRLTEEVGKPSFHQSLTGTLMRLGAGYGLAL 75

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  I  G+           ++    +L + P+  + PL +  + +     N  + +++  
Sbjct: 76  LAGIGFGLIAALLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTPIIVVVAL 131

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              +    +V+    +        A     T W   + + LP + P  +TGA  A G AW
Sbjct: 132 SAFFPAALSVMNATESVQRVHVSAARVMGATPWGLVKRVYLPAVMPELITGAQLAFGNAW 191

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            A I +E+           GLG  ++ S E      V+  +L++      +++ +   L
Sbjct: 192 RALISAEMLIGFGK-----GLGRSLSYSGEIADMTGVMTNILVIAVLAALIDQLVLEKL 245


>gi|325519230|gb|EGC98685.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 79

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/78 (55%), Positives = 52/78 (66%)

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           AITA GGAWNASIVSE   WG   +   GLGAYIA++T  G FP+++LG+ +M  FV   
Sbjct: 1   AITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLF 60

Query: 570 NRFLWHPLYLYGTRCLRL 587
           NR LW P+Y Y    LRL
Sbjct: 61  NRLLWRPMYAYAESRLRL 78



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 37/73 (50%)

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            + +  G W   + SE +  G T I   G+G+YIA    + D   I+  +  M   + L+
Sbjct: 1   AITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLF 60

Query: 256 DQLLFRPMIVWSN 268
           ++LL+RPM  ++ 
Sbjct: 61  NRLLWRPMYAYAE 73


>gi|116254681|ref|YP_770517.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259329|emb|CAK10464.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 284

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR+VV  +IA    IP+G+ +G        +    +     P   + PL++  +  
Sbjct: 91  FASLFRIVVAALIAVSAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGI 150

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++      I  +  AG  A P +    A S   +  + +  I+LP   
Sbjct: 151 GETSK----ITLLVLAMFAPICLSAQAGVRALPIERVNAARSLGASRLQLFLDIVLPSAL 206

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG   A G  W   + +E+ +       T G+G  I  +++  +   V +G+ I+ 
Sbjct: 207 PEILTGIRIALGVGWGTLVAAELIA------STRGIGLMIMSASQFLATDVVFVGIGIIA 260

Query: 564 CFVLAL 569
                 
Sbjct: 261 ICAFTF 266



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 82/214 (38%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   +  R++ A +I++        L   +R    VL   ++    +P L +L  
Sbjct: 84  ASLSAHVFASLFRIVVAALIAVSAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +  +    +  S    +  +P +    +RS   S  Q
Sbjct: 144 MIIWLGIG--------ETSKITLLVLAMFAPICLSAQAGVRALPIERVNAARSLGASRLQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P ++P ++  + +++  GW  +VA+E+I          GIG  I  A +    
Sbjct: 196 LFLDIVLPSALPEILTGIRIALGVGWGTLVAAELIA------STRGIGLMIMSASQFLAT 249

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             +   +  +    F +    + L   ++ W  K
Sbjct: 250 DVVFVGIGIIAICAFTFSAAIRFLEAYLVPWKGK 283


>gi|254455113|ref|ZP_05068548.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198263523|gb|EDY87795.1| choline ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 277

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 90/238 (37%), Gaps = 15/238 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             +V+  I +L    Q +        +  + +         + T   +L+A  + +    
Sbjct: 53  VFVVVAGITLLAWVSQRSIGFTVFTALGLLLIINQGYWVETTETLALVLAAATVCMGLGV 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                AA    L   + P+LD+MQ+IP   +L   ++ F     G V G     IFA+  
Sbjct: 113 PLGIAAAHRPWLYKAMEPVLDLMQTIPTFVYLIPALILFGL---GMVPGLIATVIFALPA 169

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        + + P  L E  +SF  +  Q  W + +P+++P ++  +  ++    
Sbjct: 170 P-----IRLTQLGITSTPTALIEAGKSFGSTPMQLLWKVELPYALPQIMAGLTQTIMLSL 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             VV + ++          G+G     A+   ++       +T++ V  + D++  R 
Sbjct: 225 SMVVIAALV-------GADGLGVPTLRALNSVNIAQGFEVGITIVLVAIISDRMFRRR 275



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 16/233 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403
           F VV G+ +             FT   +L +I  G       T+  V+    +   + +P
Sbjct: 54  FVVVAGITLLAWVSQRSIGFTVFTALGLLLIINQGYWVETTETLALVLAAATVCMGLGVP 113

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI    RP +   ++P   L+   P  V+    +  +  + L     L   +IF     
Sbjct: 114 LGIAAAHRPWLYKAMEPVLDLMQTIPTFVYL---IPALILFGLGMVPGLIATVIFALPAP 170

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I      G ++ P    E   SF  T  +    + LP   P  + G       + +  ++
Sbjct: 171 IRL-TQLGITSTPTALIEAGKSFGSTPMQLLWKVELPYALPQIMAGLTQTIMLSLSMVVI 229

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
           + +           GLG     +    +  +     + +    +  +R     
Sbjct: 230 AALVG-------ADGLGVPTLRALNSVNIAQGFEVGITIVLVAIISDRMFRRR 275


>gi|161521107|ref|YP_001584534.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189352715|ref|YP_001948342.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160345157|gb|ABX18242.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189336737|dbj|BAG45806.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 280

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMVISLL 81
                +  + +       +   P D V      L     L ++   +  R+L       L
Sbjct: 40  ALLFTLWSVGSARGWIAPQILPPPDQVYQALAELAASGDLLRHTLISLQRVLVGFAAGTL 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F        SR     ++P  + +  IP+LG+L F ++      P K +         
Sbjct: 100 LGFAIGAALGLSRTFEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYL--------L 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +  +T S  Q     P  L+EV+R F  +  Q+  ++ +P ++P L   + ++ +
Sbjct: 152 IAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQRIVHVVLPAAVPMLATGVRLAFT 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  +V  E++   +      G+G  I    +   L  ++ A++ +  V  L ++LL
Sbjct: 212 KSWLALVVVELVASSE------GLGYLIVYGRQLFQLDLVMAAVVVVGAVGLLINRLL 263



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 90/261 (34%), Gaps = 21/261 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----- 378
                 +  +  + +R++++L  +    +      +               D +Y     
Sbjct: 13  PHALGASSRRRAAVKRLAWLLAPWALPALLFTLWSVGSARGWIAPQILPPPDQVYQALAE 72

Query: 379 ------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 ++    I++ RV+V     +++   +G  +G      + + P    L   P   
Sbjct: 73  LAASGDLLRHTLISLQRVLVGFAAGTLLGFAIGAALGLSRTFEAYVLPSFNALVQIPVLG 132

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P ++  V            LL+       +  + + G    P    EVA  F  T  +
Sbjct: 133 WLPFLLLLVGVG----EPLKYLLIAHAALVPVTLSTLQGFRQTPAALDEVARGFGYTRRQ 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              +++LP   P   TG   A   +W A +V E+ +       + GLG  I    +    
Sbjct: 189 RIVHVVLPAAVPMLATGVRLAFTKSWLALVVVELVA------SSEGLGYLIVYGRQLFQL 242

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  V+++    L +NR L
Sbjct: 243 DLVMAAVVVVGAVGLLINRLL 263


>gi|56965009|ref|YP_176740.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911252|dbj|BAD65779.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 261

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 14/202 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +      T  R+L    I++    ++  L A+ + +   L  ++  +QSIP + +   
Sbjct: 57  GRMLTATGLTLGRLLIGFAIAISLGLLFGYLIARYKWVDDTLGFLVTALQSIPSIVWFPL 116

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F             + +F +     W MT S      N+P     V+R+   SG  
Sbjct: 117 AIVWFGLGN--------ASILFIVTIGATWTMTVSASTGFKNVPSLYLNVARTLGSSGTH 168

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P L+  + M+ +  W  ++A E++     +  L  +G  +        +
Sbjct: 169 LVRTVVLPASVPHLISGLRMAWAFAWRAIMAGELLGGSGGLGYLLNMGRSLQQ------M 222

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +L  M+ +  +  L D L+F
Sbjct: 223 DLVLSVMIIIGIIGTLMDNLVF 244



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 78/211 (36%), Gaps = 10/211 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T+ R+++   IA  + +  G  I     +   +      L + P+ V+FPL
Sbjct: 57  GRMLTATGLTLGRLLIGFAIAISLGLLFGYLIARYKWVDDTLGFLVTALQSIPSIVWFPL 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +      + +    +  ++  G  W +  +   G    P+ +  VA +   +G    R 
Sbjct: 117 AIVWFGLGNAS----ILFIVTIGATWTMTVSASTGFKNVPSLYLNVARTLGSSGTHLVRT 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P+ ++G   A   AW A +  E+            +G  + +         V+
Sbjct: 173 VVLPASVPHLISGLRMAWAFAWRAIMAGELLGGSGGLGYLLNMGRSLQQ------MDLVL 226

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
             ++I+      ++  ++        +   L
Sbjct: 227 SVMIIIGIIGTLMDNLVFLRAERSVQKKWGL 257


>gi|315122235|ref|YP_004062724.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495637|gb|ADR52236.1| proline/glycine betaine ABC transporter, permease protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 281

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 15/237 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++ I I+++L+  I+ +        +  + +      Q  + T   +L +  IS+L    
Sbjct: 54  LVSICILSLLVLVIKRSIAITVGTAMGLLLIVNQGYWQETTETLSLVLVSTSISMLIGVP 113

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
               AA   R   ++  +LD MQ+IP   +L   +V F     G V G     +F+I TS
Sbjct: 114 LGVFAAWYPRFYSIIRLLLDSMQTIPTFVYLIPALVLFGL---GMVPGMVATIVFSIPTS 170

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                       + + P  L+E +R+F  + +Q F  + +PF++P +V ++  ++     
Sbjct: 171 -----VRLTRLGIISTPPVLKEAARAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLS 225

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            VV          ++   G+G  +  A+   D+     +   ++ +  + D+L   P
Sbjct: 226 MVVV-------TALVGSDGLGVPVLRALNTVDIGKGFESGFCIVIIAIILDRLFSIP 275



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+V   I+ +I +P+G++  + P   S I+     +   P  V+    +       
Sbjct: 96  TLSLVLVSTSISMLIGVPLGVFAAWYPRFYSIIRLLLDSMQTIPTFVYLIPALVLFGLGM 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I  +          G  + P   KE A +F  T ++ +R + LP   P 
Sbjct: 156 VPGMVATIVFSIPTSVRL----TRLGIISTPPVLKEAARAFGATPFQVFRKVELPFAIPQ 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V         + +  +V+ +         + GLG  +  +       +       +   
Sbjct: 212 IVASLTQTIMLSLSMVVVTALVG-------SDGLGVPVLRALNTVDIGKGFESGFCIVII 264

Query: 566 VLALNRFL 573
            + L+R  
Sbjct: 265 AIILDRLF 272


>gi|192291067|ref|YP_001991672.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284816|gb|ACF01197.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 342

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 88/281 (31%), Gaps = 11/281 (3%)

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
           L    + +   +         + +      +    G       E+  +      +  ++ 
Sbjct: 47  LSCLWREDIGDWTRTKEVAIAAFVFGGAIAIAAVAGFWSQRVGESLQRRSPWLLLLGVVL 106

Query: 346 IFWFCVVCGVAIGIAWQSIGY-IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             W  +   + +           +      D + +      ++   +   +I +      
Sbjct: 107 ALWEVLTAKLGVLPLPFFPPPQAIVEVYTDDFVKLFDSVFASVKLQLGGYLIGAAAGFVT 166

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG+   +   + P  + +   PA  + P+          +     + L+   T + +
Sbjct: 167 GVSIGWSRAVGYWVHPVLRFIGPLPATAWLPIAFFAFP----SSWSASTFLIALATGFPV 222

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                +G ++  N + +VA +           + +P   P+   G     G ++   +V+
Sbjct: 223 TVLTWSGVASVSNAYYDVARTLGAKPSFLVFKVAIPAALPHVFVGLFMGLGASFAVLVVA 282

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           E+          +GLG Y+  +    ++  +   +L+M   
Sbjct: 283 EMMG------VKSGLGWYLQWAQGWAAYANMYAALLVMSLL 317



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      +    L   +I     FV       SR +G  + P+L  +  +P   +L
Sbjct: 137 DFVKLFDSVFASVKLQLGGYLIGAAAGFVTGVSIGWSRAVGYWVHPVLRFIGPLPATAWL 196

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F I  +  + +T   +  + ++     +V+R+     
Sbjct: 197 PIAFFAF--------PSSWSASTFLIALATGFPVTVLTWSGVASVSNAYYDVARTLGAKP 248

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P ++P +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 249 SFLVFKVAIPAALPHVFVGLFMGLGASFAVLVVAEMMGVKS------GLGWYLQWAQGWA 302

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
               +  A+L M  +       LF+    ++VW 
Sbjct: 303 AYANMYAALLVMSLLCSGAITALFKVRDRLLVWQ 336


>gi|148257909|ref|YP_001242494.1| putative ABC transporter [Bradyrhizobium sp. BTAi1]
 gi|146410082|gb|ABQ38588.1| putative ABC transporter [Bradyrhizobium sp. BTAi1]
          Length = 288

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A   +     + L          D +      +    +P     +   +L    I + 
Sbjct: 45  LVALAALWQAYGLWLGNPLLFPTFTDTLSAFFENIANGVIPARTLVSLETLLIGYGIGIA 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V  T+A  SR    +L  +  +   +P +  L   +++F             + IF 
Sbjct: 105 LAAVLTTIAIGSRIGADMLEALTSMFNPLPAIALLPLALIWFGLGKG--------SIIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +    ++   L  V  ++ L G +   ++ +P + P ++  + +  +
Sbjct: 157 LVHSVLWAIALNTHSGFRSVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G +I     + +   +   + T++ +  + + ++F
Sbjct: 217 FAWRTLIAAELVFGVSS--GAGGLGWFIFENRNQLETANVFAGLFTVIFIGLVVENVVF 273



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 22/249 (8%)

Query: 351 VVCGVAIGIAWQSIGYIVNHF----TYQDVLYVIW----------LGCITMFRVVVLIII 396
            V  VA+   WQ+ G  + +     T+ D L   +             +++  +++   I
Sbjct: 42  AVILVALAALWQAYGLWLGNPLLFPTFTDTLSAFFENIANGVIPARTLVSLETLLIGYGI 101

Query: 397 A-SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
             ++  +   I IG     +  ++    +    PA    PL +        +    +  +
Sbjct: 102 GIALAAVLTTIAIG-SRIGADMLEALTSMFNPLPAIALLPLALIWFGLGKGS----IIFV 156

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++    W I  N  +G  +  N  + V  ++ + G +  R+I++P  FP  +TG      
Sbjct: 157 LVHSVLWAIALNTHSGFRSVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWA 216

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            AW   I +E+     +     GLG +I E+  +     V  G+  +    L +   ++ 
Sbjct: 217 FAWRTLIAAELVFG--VSSGAGGLGWFIFENRNQLETANVFAGLFTVIFIGLVVENVVFA 274

Query: 576 PLYLYGTRC 584
            +     R 
Sbjct: 275 TIERKTVRR 283


>gi|146276802|ref|YP_001166961.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555043|gb|ABP69656.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 284

 Score = 96.1 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 19/276 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +   +       +       RT   + F        +      S+     W       A 
Sbjct: 10  VDPLALRLSRATARIASAGLRTAPPLLFGLS---FPVALVALWSFGASSGWLPPQILPAP 66

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+ W+S   +           +      ++ RV     + + I +  G  +G  P + + 
Sbjct: 67  GVVWESFALLFAD------GSLGAHTQASLHRVATGFALGAAIGLAFGAAVGLLPAVRAY 120

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             P  Q +       + PL+   +            +++ +     I+     G +  P 
Sbjct: 121 GWPPVQAVTRVNVLAWMPLLTLFLGI----DETLKVVVIAWSAAIPIILGTARGFADVPA 176

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            ++E+ ++  +  ++  R I+LPG  P   TG       AW   ++ E+ +         
Sbjct: 177 GYRELGAAMGLRPYQRLRLIVLPGALPQVFTGLREGLANAWQTLVIVELFA------SFE 230

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GLG  +    +      V++ +L++      L+  L
Sbjct: 231 GLGYLMTWGRQLFQLDLVLVAMLVIAAIGFLLDGVL 266



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRT 68
           R  P +   L+F + +  +            Q    P  + +   +     SL  +   +
Sbjct: 30  RTAPPLLFGLSFPVALVALWSFGASSGWLPPQILPAPGVVWESFALLFADGSLGAHTQAS 89

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+ +   +       +         +     P +  +  + +L ++    ++      
Sbjct: 90  LHRVATGFALGAAIGLAFGAAVGLLPAVRAYGWPPVQAVTRVNVLAWMPLLTLFLGID-- 147

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E   +  I  S    +     +   ++P    E+  +  L  +Q+   + +P +
Sbjct: 148 ------ETLKVVVIAWSAAIPIILGTARGFADVPAGYRELGAAMGLRPYQRLRLIVLPGA 201

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +   +   ++  W  +V  E+           G+G  +    +   L  +L AML +
Sbjct: 202 LPQVFTGLREGLANAWQTLVIVELFA------SFEGLGYLMTWGRQLFQLDLVLVAMLVI 255

Query: 249 LGVIFLYDQLL 259
             + FL D +L
Sbjct: 256 AAIGFLLDGVL 266


>gi|221196816|ref|ZP_03569863.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD2M]
 gi|221203485|ref|ZP_03576504.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD2]
 gi|221177419|gb|EEE09847.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD2]
 gi|221183370|gb|EEE15770.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia multivorans CGD2M]
          Length = 274

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 93/257 (36%), Gaps = 18/257 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSL 61
               ++RR     +  L   L    I   +             P D++      +   +L
Sbjct: 14  RATVLTRRRQARDWRGLVLPLAAVAIWWAIASAHLVNSGLLVSPADVLHTAWTQIASGAL 73

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +  S +  R      I      +  T    SR    V+ P  D  + I +  ++    V
Sbjct: 74  LRALSASLAREACGFAIGATGGLLLGTALGLSRVATRVVGPSFDTFKQISLFAWMPLISV 133

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      KV+   LAA+  +               +  +PR   +V+R+ R S  Q   
Sbjct: 134 WFGLGDVAKVVFLSLAALLPVAAHTC--------DGIHAVPRAYVDVARALRYSRLQLVR 185

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P ++P +   + + +   W   + +E ++V  +     GIG+ +    ++  +  +
Sbjct: 186 HVILPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLV 240

Query: 242 LYAMLTMLGVIFLYDQL 258
           L+ ++ +    +  + L
Sbjct: 241 LFGIIVVGATGWALNAL 257



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 86/257 (33%), Gaps = 11/257 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R   + R     ++  L        +        +  V  G+       +   +T   
Sbjct: 12  APRATVLTRRRQARDWRGLVLPLAAVAIWWAIASAHL--VNSGLLVSPADVLHTAWTQIA 69

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     ++ R      I +   + +G  +G     +  + P            + P
Sbjct: 70  SGALLRALSASLAREACGFAIGATGGLLLGTALGLSRVATRVVGPSFDTFKQISLFAWMP 129

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+        +   ++LS          +  +   G  A P  + +VA +   +  +  R
Sbjct: 130 LISVWFGLGDVAKVVFLS----LAALLPVAAHTCDGIHAVPRAYVDVARALRYSRLQLVR 185

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILP   P   TG       +W A++ +E        +  +G+G  + + +E+     V
Sbjct: 186 HVILPAALPSIFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLV 240

Query: 556 VLGVLIMCCFVLALNRF 572
           + G++++     ALN  
Sbjct: 241 LFGIIVVGATGWALNAL 257


>gi|163846397|ref|YP_001634441.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222524164|ref|YP_002568635.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163667686|gb|ABY34052.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222448043|gb|ACM52309.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 268

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  V     + +  +       P  +       L    L Q+   T    L    ++L+
Sbjct: 32  MLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSSGLLWQHTLATLSAALGGFTLALI 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +     A  R L   L P+L   Q+IP++      +++F      KV+ A L     
Sbjct: 92  IALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKVLVAALITFL- 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +   ++ +IPR+L E++     + WQ   Y+  P ++P L   +   ++
Sbjct: 151 -------PILINTVVAIRSIPRELIEMAYISGANRWQLLRYVEAPLALPVLFGGVRTGLA 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
                 V  E +          G+G+ I +A    D   I  A+ T+  +     +   L
Sbjct: 204 LATTGAVVGEFVAG------RVGLGALINIARGLFDTPLIFVALATLALITLTLYVLAGL 257

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 258 LERLLVRW 265



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 12/256 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            +                      +L +FW   V              +V    +Q +  
Sbjct: 9   RVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSS 68

Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +       T+   +    +A II + +G  +     +   + P      A P     PL
Sbjct: 69  GLLWQHTLATLSAALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPL 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      L+    T   IL N +    + P +  E+A       W+  RY
Sbjct: 129 IILWFGAGLTSK----VLVAALITFLPILINTVVAIRSIPRELIEMAYISGANRWQLLRY 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  P   P    G  T    A   ++V E  +         GLGA I  +      P + 
Sbjct: 185 VEAPLALPVLFGGVRTGLALATTGAVVGEFVAGR------VGLGALINIARGLFDTPLIF 238

Query: 557 LGVLIMCCFVLALNRF 572
           + +  +    L L   
Sbjct: 239 VALATLALITLTLYVL 254


>gi|169335903|ref|ZP_02863096.1| hypothetical protein ANASTE_02338 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258641|gb|EDS72607.1| hypothetical protein ANASTE_02338 [Anaerofustis stercorihominis DSM
           17244]
          Length = 511

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 74/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++A+V++ +       L ++ R+    ++ +++ + +IP +  L F +       P   I
Sbjct: 27  MTAIVVAGVIGLFLGILISEYRKSSKFVLSLVNFIYTIPSISLLGFLI-------PLSGI 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G    AI A+    +  M  + Y  + NI   L E ++    + +Q  + + +P +MP +
Sbjct: 80  G-NTTAIIALSIYALLPMVRNTYTGIVNIDEKLLEAAKGMGSTDFQILYKIKLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +             +  +    + I   G+G  I   I   +    +     +  + 
Sbjct: 139 ISGLR-------NMATMTIALAGIASFIGAGGLGVSIYRGITTNNTAMTVIGSFLIALLA 191

Query: 253 FLYDQLL 259
            L D +L
Sbjct: 192 VLIDFIL 198



 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    +   +  I++A +I + +GI I      S  +      +   P+      +
Sbjct: 14  FFLGLLLEHLKISMTAIVVAGVIGLFLGILISEYRKSSKFVLSLVNFIYTIPSISLLGFL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + LS+  +      ++ N   G         E A     T ++    I
Sbjct: 74  IPLSGIGNTTAIIALSIYALL----PMVRNTYTGIVNIDEKLLEAAKGMGSTDFQILYKI 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G         N + ++   +     +   GLG  I       +    V+
Sbjct: 130 KLPLAMPVIISGLR-------NMATMTIALAGIASFIGAGGLGVSIYRGITTNNTAMTVI 182

Query: 558 GVLIMCCFVLALNRFL 573
           G  ++    + ++  L
Sbjct: 183 GSFLIALLAVLIDFIL 198


>gi|309777455|ref|ZP_07672410.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914769|gb|EFP60554.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease/periplasmic amine-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 515

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V + +       L ++ R+   + + I+  + +IP +  L F +       P   IG
Sbjct: 29  IAIVFATIVGVSIGILISEKRKASSLTLGIISFLYTIPSISMLGFLI-------PVTGIG 81

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              +AI A+    +  +  S Y  +  +  D+ E +R    +  Q  W + +P +MP ++
Sbjct: 82  -NTSAIIALSIYALLPIIRSTYTGITGVAEDVLEAARGMGSTRSQILWKIKLPLAMPVIL 140

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                        VV +  +    + I   G+G  I   I   +L   L   L +  + F
Sbjct: 141 SGFK-------NMVVMTIALAGIASFIGAGGLGVAIYRGITTNNLTMTLAGSLAVAVLAF 193

Query: 254 LYDQLL 259
           ++D L+
Sbjct: 194 VFDILM 199



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F  Q   +++ L    +    + I+ A+I+ + +GI I  +   SS        L   P
Sbjct: 7   DFIVQRWDFLLPLIYEHLQISAIAIVFATIVGVSIGILISEKRKASSLTLGIISFLYTIP 66

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +      ++      + +  + LS+  +      I+ +   G +    D  E A     T
Sbjct: 67  SISMLGFLIPVTGIGNTSAIIALSIYALL----PIIRSTYTGITGVAEDVLEAARGMGST 122

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    I LP   P  ++G         N  +++   +     +   GLG  I      
Sbjct: 123 RSQILWKIKLPLAMPVILSGFK-------NMVVMTIALAGIASFIGAGGLGVAIYRGITT 175

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +    + G L +       +  +
Sbjct: 176 NNLTMTLAGSLAVAVLAFVFDILM 199


>gi|119385086|ref|YP_916142.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119374853|gb|ABL70446.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 260

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 14/266 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           PP +   + P +  +LA +LV  + + L    Q    P ++   +        L   A  
Sbjct: 7   PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++++  +++           +SR     L P L I+ ++P L  +    ++     
Sbjct: 67  TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E AAI A+  +++  +T  + +    +  DL++++R+FR+  W +  ++ +P 
Sbjct: 126 -------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLPQ 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P +  +    +S  W  V+  E +   +      G+G  I L     D+  +L   L 
Sbjct: 179 LAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWALA 232

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLE 273
            + V+   D +L RP    +N++R +
Sbjct: 233 FVAVMLAIDLILLRPWESRANRWRQD 258



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   +T+FRVV    +A    + +G+W+G        + P   +L   PA V   L
Sbjct: 58  GELWFNAGMTLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVL 117

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +            L +       +   +  G  A   D  ++A +F +  W   R+
Sbjct: 118 CYIWIGL----NETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRH 173

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P+    A       W   +V E         R+ G+G  I           V+
Sbjct: 174 VVLPQLAPHVAASARAGISLIWKIVLVVEFLG------RSNGVGFKIHLLFSSFDVEGVL 227

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
              L     +LA++  L  P      R
Sbjct: 228 AWALAFVAVMLAIDLILLRPWESRANR 254


>gi|317152960|ref|YP_004121008.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943211|gb|ADU62262.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 254

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           CI+ +R V  + +A  +  P+G+ +G      + + PF  L    P  V  P+ +     
Sbjct: 58  CISGYRAVTAMALAWCVAFPLGLVMGSVRRADALLAPFIFLTYPIPKIVLLPVFLLLFGL 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    ++L++     + IL     G  +    + +   S   + W   R ++LP   
Sbjct: 118 GDASKIAMIALIL----GYQILVTTRDGVRSIHPKYFDSVRSLGGSRWNVLREVLLPAAL 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  T      G +       E  +       T GLG  I ++     +  +  G++ M 
Sbjct: 174 PHGFTALRLGTGVSVAVLFFVESFA------TTRGLGYMIMDAWGAMDYLGMFTGIIGMS 227

Query: 564 CFVLALNRF 572
               AL   
Sbjct: 228 LMGAALYEL 236



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA  L+  +  + L G+     P D +      L      ++   +  R ++AM ++  
Sbjct: 15  MLALGLLWKLAAVALGGVI-LPHPEDALAAFASALSTRIFWEHFCISGYRAVTAMALAWC 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +    RR   +L P + +   IP +          + ++       + + I  
Sbjct: 74  VAFPLGLVMGSVRRADALLAPFIFLTYPIPKIV--------LLPVFLLLFGLGDASKIAM 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    + +I     +  RS   S W     + +P ++P     + +   
Sbjct: 126 IALILGYQILVTTRDGVRSIHPKYFDSVRSLGGSRWNVLREVLLPAALPHGFTALRLGTG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                +   E            G+G  I  A    D L +   ++ M  +     +L
Sbjct: 186 VSVAVLFFVESFA------TTRGLGYMIMDAWGAMDYLGMFTGIIGMSLMGAALYEL 236


>gi|210621362|ref|ZP_03292598.1| hypothetical protein CLOHIR_00541 [Clostridium hiranonis DSM 13275]
 gi|210154786|gb|EEA85792.1| hypothetical protein CLOHIR_00541 [Clostridium hiranonis DSM 13275]
          Length = 520

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L    +     ++ + +I+Q+IP +  L F +  F              AI  +
Sbjct: 37  GVPLGILITYFKPAKKPIMGMTNIIQAIPSMALLGFMIPLFGIG--------TKPAIVMV 88

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +    L NI  D  E ++   L  +Q  + + +P + P ++  + +S  G
Sbjct: 89  TLYSLLPIIKNTVAGLNNINPDTIEAAKGIGLDRFQILYKVQIPLAAPVIMAGVRISAVG 148

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               +  +  I  G       G+G  +   I+  +   IL   +    +  L D + 
Sbjct: 149 AVGLMTLAAFIGAG-------GLGYLVYAGIRTVNNAQILAGAVPACILALLIDYIF 198



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 11/173 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI I +       I     ++ A P+      ++               +++   +
Sbjct: 37  GVPLGILITYFKPAKKPIMGMTNIIQAIPSMALLGFMIPLFGIGTK----PAIVMVTLYS 92

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N +AG +    D  E A    +  ++    + +P   P  + G   +  GA   
Sbjct: 93  LLPIIKNTVAGLNNINPDTIEAAKGIGLDRFQILYKVQIPLAAPVIMAGVRISAVGAVGL 152

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++     G       GLG  +       +  +++ G +  C   L ++   
Sbjct: 153 MTLAAFIGAG-------GLGYLVYAGIRTVNNAQILAGAVPACILALLIDYIF 198


>gi|329938447|ref|ZP_08287872.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302420|gb|EGG46311.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
          Length = 297

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 87/235 (37%), Gaps = 15/235 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +  ++V  +I  +          P  + D +       SL  ++  T   +L    I++
Sbjct: 52  FIGLLVVWQVIVQMFDVSDILVPAPTAVADSLVDGFQDGSLMTHSIVTLKEILIGFGIAV 111

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V A L  + R +  VL P+L + Q++P +      +V+F      KV+   L A F
Sbjct: 112 GSALVCAVLITQFRTVERVLFPLLILTQTVPKVAMAPLLIVWFGIGISSKVLTVALIAFF 171

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  +      +   +  E+ RSF  S  Q   +L +P ++P +   + +++
Sbjct: 172 --------PLLINAILGFRSAAYEQVEMLRSFGASRLQVMRHLQIPSALPHIFAGLEVAV 223

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                  V +E +   +      G+G  I  +    D+      ++ +  +    
Sbjct: 224 ILSVTGAVVAEFVGSSE------GLGYLIQASNFTLDVARTFAVIVVLSAIGIAL 272



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T+  +++   IA    +   + I     +   + P   L    P     PL
Sbjct: 90  GSLMTHSIVTLKEILIGFGIAVGSALVCAVLITQFRTVERVLFPLLILTQTVPKVAMAPL 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +      L +     + +L N I G  +   +  E+  SF  +  +  R+
Sbjct: 150 LIVWFGIGISSK----VLTVALIAFFPLLINAILGFRSAAYEQVEMLRSFGASRLQVMRH 205

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P   P+   G   A   +   ++V+E          + GLG  I  S          
Sbjct: 206 LQIPSALPHIFAGLEVAVILSVTGAVVAEFVG------SSEGLGYLIQASNFTLDVARTF 259

Query: 557 LGVLIMCCFVLAL 569
             ++++    +AL
Sbjct: 260 AVIVVLSAIGIAL 272


>gi|146340088|ref|YP_001205136.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192894|emb|CAL76899.1| Putative ABC transporter permease [Bradyrhizobium sp. ORS278]
          Length = 285

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T  RV   + +  +  + VG  + +   + + + P   LLA      + P+ +       
Sbjct: 90  TTLRVFTGLALGFVSGVAVGATLHYVHWLRNLLMPTVLLLAPISPVAWLPVAIFVFGIG- 148

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              ++    L+     + I+ +  A   + P ++  VA     T  + +  +ILP I P 
Sbjct: 149 ---DVPAIFLVFITVFFTIVLSTSAQIESVPVNYIHVARIMGATQTQLFWRVILPSILPS 205

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                     GAW   +++E    G      TGLG  I+ +    +   V   + ++   
Sbjct: 206 LFMTLRLNLFGAWMVVLIAETVGVG------TGLGQIISMARATFNAKLVFFTMAVIGAL 259

Query: 566 VLALN 570
               +
Sbjct: 260 GFLSD 264



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      TTLR+ + + +  +              L  +L+P + ++  I  + +L   +
Sbjct: 83  LGITMFWTTLRVFTGLALGFVSGVAVGATLHYVHWLRNLLMPTVLLLAPISPVAWLPVAI 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F           ++ AIF +F +  + +  S    + ++P +   V+R    +  Q F
Sbjct: 143 FVFGIG--------DVPAIFLVFITVFFTIVLSTSAQIESVPVNYIHVARIMGATQTQLF 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P  +P L   + +++ G W  V+ +E + VG       G+G  I++A    +   
Sbjct: 195 WRVILPSILPSLFMTLRLNLFGAWMVVLIAETVGVGT------GLGQIISMARATFNAKL 248

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           + + M  +  + FL D  L
Sbjct: 249 VFFTMAVIGALGFLSDWGL 267


>gi|330821155|ref|YP_004350017.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327373150|gb|AEA64505.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 317

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 80/205 (39%), Gaps = 15/205 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + + V  +   A  T   +++A+    +         A+S R+  V+ PILDIMQ+ P  
Sbjct: 82  LAIAVLGVWSDAMTTLALIVTAIAFCAVIGIPVGIACARSERVWRVVQPILDIMQTTPTF 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   V+ F            ++   A+ T+ +  +    +  +  +  +L E   +F 
Sbjct: 142 VYLVPVVMLFGVG--------TVSGEVAVVTAAMPPLIRFTHLGIRMVDHELVEAGLAFG 193

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               Q  W + +P ++P ++  +  ++       V   MI          G+G  +   +
Sbjct: 194 ADRRQLLWEVQLPLAVPTILGGLNQTVLTAMVMSVVISMI-------GAEGLGLVVLQGL 246

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL 258
              D+       + ++ +  + D++
Sbjct: 247 GRLDVGQAAIGGVAIVLLAMMLDRV 271



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 86/264 (32%), Gaps = 16/264 (6%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
                  L +        +      +     L    F + C V   +AW+  G  +  FT
Sbjct: 18  AAVQWIALHLRPLFLAVKWPIQKLLEANIDALHAVPFPLFCLVCALLAWRFAGRAIGAFT 77

Query: 373 YQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              +L +  LG       T+  +V  I   ++I IPVGI       +   +QP   ++  
Sbjct: 78  LLGLLAIAVLGVWSDAMTTLALIVTAIAFCAVIGIPVGIACARSERVWRVVQPILDIMQT 137

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V+   VV       ++  +     ++      ++     G     ++  E   +F 
Sbjct: 138 TPTFVYLVPVVMLFGVGTVSGEVA----VVTAAMPPLIRFTHLGIRMVDHELVEAGLAFG 193

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
               +    + LP   P  + G       A   S+V  +           GLG  + +  
Sbjct: 194 ADRRQLLWEVQLPLAVPTILGGLNQTVLTAMVMSVVISMIG-------AEGLGLVVLQGL 246

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
            +    +  +G + +    + L+R
Sbjct: 247 GRLDVGQAAIGGVAIVLLAMMLDR 270


>gi|288959846|ref|YP_003450186.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288912154|dbj|BAI73642.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 247

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 84/244 (34%), Gaps = 14/244 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W      +   +  Q    +     + D   +      ++ R V    +A +  +
Sbjct: 13  ALLLVWSAAAWNLPPYVLPQPWAVVAEAVRWLDNGQLAAHVGASLLREVGGFAVAVLGAL 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+     P   +   P   L  A P   + PL +      +    + ++++++    +
Sbjct: 73  ALGLAGALSPGFRAFSAPLTGLFMAIPPIAWAPLSMIFFGLGY----VAITMVIVVAALF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   V  G  A  N     A       W+  R++ LP   P+           AW A +
Sbjct: 129 PMAVTVQEGFLAIRNSNLRAARVLGARRWQLIRHVYLPASLPFLTAALRIGFSQAWRALV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
            +E+         + G+G  +A   + G+  +V+LGV I+          ++  +     
Sbjct: 189 AAEMLG------ASQGIGWMVAMGGQIGNATQVLLGVAIIGMTAWITESLVFRRI----E 238

Query: 583 RCLR 586
           R  R
Sbjct: 239 RRYR 242



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 95/249 (38%), Gaps = 16/249 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--LDVHSLPQYASRTTLRMLSAM 76
           ++   AF  ++ + +     +    +P+    +      LD   L  +   + LR +   
Sbjct: 5   LYGWAAFPALLLVWSAAAWNLPPYVLPQPWAVVAEAVRWLDNGQLAAHVGASLLREVGGF 64

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            +++L         A S        P+  +  +IP + +   ++++F   Y        +
Sbjct: 65  AVAVLGALALGLAGALSPGFRAFSAPLTGLFMAIPPIAWAPLSMIFFGLGY--------V 116

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A    I  + ++ M  ++ +    I       +R      WQ   ++ +P S+P L   +
Sbjct: 117 AITMVIVVAALFPMAVTVQEGFLAIRNSNLRAARVLGARRWQLIRHVYLPASLPFLTAAL 176

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +  S  W  +VA+EM+          GIG  +A+  +  +   +L  +  +    ++ +
Sbjct: 177 RIGFSQAWRALVAAEMLGASQ------GIGWMVAMGGQIGNATQVLLGVAIIGMTAWITE 230

Query: 257 QLLFRPMIV 265
            L+FR +  
Sbjct: 231 SLVFRRIER 239


>gi|119387733|ref|YP_918767.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378308|gb|ABL73071.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 331

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 97/302 (32%), Gaps = 21/302 (6%)

Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
           +L        +  + +     F PL   +  +   +G +         +L    R +   
Sbjct: 25  LLASLGWFAAVAILLFWQDLTFQPLVRELALVWGAVGGVLVVLGLGGNRLGRVGRWTAQR 84

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----------DVLYVIWLGCITMFRVVVL 393
             +   +  G AI     +   I+    +            D   ++     +++ +   
Sbjct: 85  APWLLAIGIGAAIWTVLTAKTGILPQPFFPTPQAMLEVFIYDWPKILHSTSFSVWLLAKG 144

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
               ++    +G+ +G+   +S    P  + +   PA  + PL          +      
Sbjct: 145 FFFGAVAGFLIGVGMGWSRAVSYWATPLLRYVGPLPATAWLPLAFFIFP----SSGSASV 200

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+ F T + +     +G ++   D+ E+A +   +       + +P   P+   G    
Sbjct: 201 FLIAFSTAFPVAVLTWSGIASVNRDYYEIARTLGASPLFLILRVAVPAALPHVFVGLFMG 260

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              ++   +V+E+           GLG Y+  +    ++  +   + +M      L   L
Sbjct: 261 LSTSFAVLVVAEMLG------VEAGLGWYLQWAQGWAAYANMYAALFVMAAMCSGLITLL 314

Query: 574 WH 575
           + 
Sbjct: 315 FR 316



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 14/236 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
             +  ++      + +   P     +     D   +    S +   +        +  F+
Sbjct: 95  AAIWTVLTAKTGILPQPFFPTPQAMLEVFIYDWPKILHSTSFSVWLLAKGFFFGAVAGFL 154

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                  SR +     P+L  +  +P   +L      F          +  A++F I  S
Sbjct: 155 IGVGMGWSRAVSYWATPLLRYVGPLPATAWLPLAFFIF--------PSSGSASVFLIAFS 206

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + +    +  + ++ RD  E++R+   S       + VP ++P +   + M +S  + 
Sbjct: 207 TAFPVAVLTWSGIASVNRDYYEIARTLGASPLFLILRVAVPAALPHVFVGLFMGLSTSFA 266

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +V +EM+ V        G+G Y+  A        +  A+  M  +      LLFR
Sbjct: 267 VLVVAEMLGV------EAGLGWYLQWAQGWAAYANMYAALFVMAAMCSGLITLLFR 316


>gi|269794248|ref|YP_003313703.1| proline/glycine betaine ABC transporter permease [Sanguibacter
           keddieii DSM 10542]
 gi|269096433|gb|ACZ20869.1| ABC-type proline/glycine betaine transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 294

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
                LV+  +     G +          ++ +     +    A  T   +L A  I+L+
Sbjct: 58  FWVVALVLAGLAFWARGWKLGLGAFVGFAVIDMVGQWGN----AMDTLALVLIASAIALI 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA++  +  +L P+LD MQ++P   +L  TVV F+    G+V G     IFA
Sbjct: 114 IAIPLGIWAARNDAVSHLLRPVLDFMQTMPAFVYLIPTVVIFL---TGEVPGIVATVIFA 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     +         +  + R++ E   +F  +  +    + +P ++P ++  +   + 
Sbjct: 171 LAPGVRF-----TELGIRQVDREVVEAGHAFGATEGRIMRQIQLPLALPTIMAGINQVIM 225

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + M+          G+GS +  A++  ++     A L ++ +    D++
Sbjct: 226 LSLSMVVIAGMVGAA-------GLGSDVVRALQRVNISLGFEAGLAVVILAMFLDRV 275



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 74/232 (31%), Gaps = 11/232 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                 +    +         W+        F   D++        T+  V++   IA I
Sbjct: 54  SGPPFWVVALVLAGLAFWARGWKLGLGAFVGFAVIDMVGQWGNAMDTLALVLIASAIALI 113

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+GIW      +S  ++P    +   PA V+    V       +   +   +  +  
Sbjct: 114 IAIPLGIWAARNDAVSHLLRPVLDFMQTMPAFVYLIPTVVIFLTGEVPGIVATVIFALAP 173

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
              +       G      +  E   +F  T  R  R I LP   P  + G       + +
Sbjct: 174 GVRF----TELGIRQVDREVVEAGHAFGATEGRIMRQIQLPLALPTIMAGINQVIMLSLS 229

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             +++ +           GLG+ +  + ++ +        L +    + L+R
Sbjct: 230 MVVIAGMVG-------AAGLGSDVVRALQRVNISLGFEAGLAVVILAMFLDR 274


>gi|170693807|ref|ZP_02884964.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141225|gb|EDT09396.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 296

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 13/198 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +   +L +  S +  R  S  VI  L   +  +    SR    ++ 
Sbjct: 75  LVSPAQVLATASQQIVSGALFKALSASLAREASGFVIGTLGGLLLGSALGFSRLATRMIG 134

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D  + I +  ++    V+F      KV+   LAA+  +               +  +
Sbjct: 135 PSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPVAAHTC--------DGIHAV 186

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR   EV+R+FR S WQ    + +P ++P +   + +++   W   + +E ++V  +   
Sbjct: 187 PRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGLYLALIYSWLATLGAEYLLVAGS--- 243

Query: 222 LPGIGSYIALAIKEQDLL 239
             GIG+ +    ++  + 
Sbjct: 244 --GIGNTLIDGSEQFRMD 259



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 4/161 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ R     +I ++  + +G  +GF    +  I P            + PL+ 
Sbjct: 94  LFKALSASLAREASGFVIGTLGGLLLGSALGFSRLATRMIGPSFDTFKQISLFAWIPLIS 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      ++LS          +  +   G  A P  + EVA +F  + W+  R +I
Sbjct: 154 VWFGLGDAAKVVFLS----LAALLPVAAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVI 209

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           LP   P   TG   A   +W A++ +E        +  T +
Sbjct: 210 LPAALPSIFTGLYLALIYSWLATLGAEYLLVAGSGIGNTLI 250


>gi|317489317|ref|ZP_07947831.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325829726|ref|ZP_08163189.1| ABC transporter, substrate-binding protein, QAT family [Eggerthella
           sp. HGA1]
 gi|316911562|gb|EFV33157.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325488221|gb|EGC90653.1| ABC transporter, substrate-binding protein, QAT family [Eggerthella
           sp. HGA1]
          Length = 528

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ ++ L         A  RR    ++ +++ + +IP +    F +       P    
Sbjct: 29  LISIALAALIGLSLGIAIATWRRGAKPVLALVNFVYTIPSIALFGFLIPITGIGDP---- 84

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + Y  L  I   + E +R    +  Q  + + +P + P +
Sbjct: 85  ----TAIVALTVYALLPMVRNTYTGLTTIDPAIIEAARGMGSTDRQLLYRIELPLAAPVI 140

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +             +  +    T I   G+G  I   I    +   L   + +  + 
Sbjct: 141 MSGIR-------NMATMTIALAGIATFIGAGGLGVAIFRGITTNTMALTLAGSVLIALLA 193

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
              D LL   +   S +  LE ++      S      R+ 
Sbjct: 194 IAVDLLLG--LAEKSTRRHLEPSSARRQKRSGARRTSRRK 231



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 16/196 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I +A++I + +GI I      +  +      +   P+   F  ++           +
Sbjct: 29  LISIALAALIGLSLGIAIATWRRGAKPVLALVNFVYTIPSIALFGFLIPITGIGDPTAIV 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G +       E A     T  +    I LP   P  ++G 
Sbjct: 89  ALTVYALL----PMVRNTYTGLTTIDPAIIEAARGMGSTDRQLLYRIELPLAAPVIMSGI 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N + ++   +     +   GLG  I       +    + G +++    +A++
Sbjct: 145 R-------NMATMTIALAGIATFIGAGGLGVAIFRGITTNTMALTLAGSVLIALLAIAVD 197

Query: 571 RFLWHPLYLYGTRCLR 586
             L         +  R
Sbjct: 198 LLL-----GLAEKSTR 208


>gi|269121628|ref|YP_003309805.1| substrate-binding region of ABC-type glycine betaine transporter
           [Sebaldella termitidis ATCC 33386]
 gi|268615506|gb|ACZ09874.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Sebaldella termitidis ATCC 33386]
          Length = 531

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  I+IA I+ I +GI+I +   I S I      +   P+     L++  V     N ++
Sbjct: 34  VFSIVIAVILGITIGIYIFYNKKIRSLILGITNGIYTIPSIAVLGLLIPLVGIGFWNASV 93

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G  +      E++     T ++ ++ I LP   P  ++G 
Sbjct: 94  TLIIYGLL----PVIRNTYTGLESTDKKIIEISEGMGATEFQTFKNIRLPLAMPIIISGI 149

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         I++   +     +   GLG  I       +   +V+G L++    + L+
Sbjct: 150 RT-------VVIMTISLAGIASFIGAGGLGQAIYRGINTNNSVLIVIGSLLIAILAIVLD 202

Query: 571 RFL 573
            FL
Sbjct: 203 YFL 205



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 71/185 (38%), Gaps = 15/185 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++VI+++           ++++  +++ I + + +IP +  L   +      +       
Sbjct: 36  SIVIAVILGITIGIYIFYNKKIRSLILGITNGIYTIPSIAVLGLLIPLVGIGF------- 88

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A   +    +  +  + Y  L +  + + E+S     + +Q F  + +P +MP ++ 
Sbjct: 89  -WNASVTLIIYGLLPVIRNTYTGLESTDKKIIEISEGMGATEFQTFKNIRLPLAMPIIIS 147

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          V+ +  +    + I   G+G  I   I   + + I+   L +  +  +
Sbjct: 148 GIRT-------VVIMTISLAGIASFIGAGGLGQAIYRGINTNNSVLIVIGSLLIAILAIV 200

Query: 255 YDQLL 259
            D  L
Sbjct: 201 LDYFL 205


>gi|317128685|ref|YP_004094967.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315473633|gb|ADU30236.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 256

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 87/219 (39%), Gaps = 16/219 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYAS-RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
             P   V  + I      + + A   +  R+    +++++       L   S+     + 
Sbjct: 37  PSPIGAVQQLYIGFFETGILRVALIESLQRISIGFILAVMIGLCLGILIGISKLADETIG 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++  +QS+P + +L  + V F             A IF +     W MT ++   + N+
Sbjct: 97  TLVIALQSVPSIVWLPISFVIFGANTG--------AIIFIVVLGGTWAMTMNVRMGIKNV 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L   +++   +  +  W + +P S+P  +    ++ + GW  ++A+E+I  G     
Sbjct: 149 QPILIRAAKTMGYNRTEVIWKVMIPASIPSALTGARLAWAFGWRALMAAELIGRG----- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             G+G  +  A    ++  ++  M+ +  +  + +   F
Sbjct: 204 --GLGRTLMDARDFYNMDLVVSIMIIISVIGLIVEYFFF 240



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             + +   +      ++ R+ +  I+A +I + +GI IG        I      L + P+
Sbjct: 48  IGFFETGILRVALIESLQRISIGFILAVMIGLCLGILIGISKLADETIGTLVIALQSVPS 107

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+ P+               +  +++ G  W +  NV  G           A +     
Sbjct: 108 IVWLPISFVIFGA----NTGAIIFIVVLGGTWAMTMNVRMGIKNVQPILIRAAKTMGYNR 163

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 +++P   P  +TGA  A    W A + +E+   G       GLG  + ++ +  
Sbjct: 164 TEVIWKVMIPASIPSALTGARLAWAFGWRALMAAELIGRG-------GLGRTLMDARDFY 216

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574
           +   VV  ++I+    L +  F +
Sbjct: 217 NMDLVVSIMIIISVIGLIVEYFFF 240


>gi|330466133|ref|YP_004403876.1| putative ABC transporter [Verrucosispora maris AB-18-032]
 gi|328809104|gb|AEB43276.1| putative ABC transporter [Verrucosispora maris AB-18-032]
          Length = 282

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 20/256 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           + +    RT G      P    ++ ++   S  L +    V   +A      +  +  + 
Sbjct: 6   DRIAVAERTAGPDVARRPGVGSRIAASLGYSLGLPMLLLVVWGLLA---TRSTNRFFPDP 62

Query: 371 FTYQDVLYVIWLG-------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
            T  +     W+G         +++R+ + I  + ++ I  G  IG    +   ++P  +
Sbjct: 63  LTIFEAFVDTWVGPAFVEDVLPSLYRLGLGITASIVVGIAAGTIIGLMQWLRELLEPLLE 122

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
              A P  V  P+ +  +            ++++ G  W IL N I G  A  +   E A
Sbjct: 123 FFRAIPPPVLIPVAMLLLGITDT----MKVVVIVSGAVWPILLNTIEGVRATDSVMTETA 178

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            SF +T W    +++LP   P  + G       A    ++SE+ +       + GLG  I
Sbjct: 179 DSFQVTWWERLWFLVLPAASPRIMAGVRQGLSVALILMVISEMFA------SSAGLGYRI 232

Query: 544 AESTEKGSFPEVVLGV 559
           A         E+  G+
Sbjct: 233 AYFQRNYLIAEMWSGI 248



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 110/267 (41%), Gaps = 22/267 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---Q 63
             P +  RI  ++   L   +++ ++  LL          D + I    +D    P   +
Sbjct: 21  RRPGVGSRIAASLGYSLGLPMLLLVVWGLLATRSTNRFFPDPLTIFEAFVDTWVGPAFVE 80

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +  R+   +  S++      T+    + L  +L P+L+  ++IP    +   ++  
Sbjct: 81  DVLPSLYRLGLGITASIVVGIAAGTIIGLMQWLRELLEPLLEFFRAIPPPVLIPVAMLLL 140

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K        +  I +  VW +  +  + +      + E + SF+++ W++ W+L
Sbjct: 141 GITDTMK--------VVVIVSGAVWPILLNTIEGVRATDSVMTETADSFQVTWWERLWFL 192

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P ++  +   +S     +V SEM           G+G  IA   +   L+A ++
Sbjct: 193 VLPAASPRIMAGVRQGLSVALILMVISEMFASSA------GLGYRIAY-FQRNYLIAEMW 245

Query: 244 AMLTMLGVIFLYDQLLF----RPMIVW 266
           + + +LG++ ++  ++F    R ++ W
Sbjct: 246 SGILLLGLVGVFLAVVFGIVERRVLRW 272


>gi|239816814|ref|YP_002945724.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239803391|gb|ACS20458.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 293

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 93/235 (39%), Gaps = 21/235 (8%)

Query: 42  TTVPRDIVDIVPITLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
              P+ +       L   +    L Q+   +  R+ SA +++ +           SR   
Sbjct: 72  LPTPQAVFQQFYEYLTGQANDKPLWQHFLASMFRVFSAFLLACITAIPVGIAMGMSRFWR 131

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +  P L+  + +P L +L   +++F           EL  +  IF S    +  +    
Sbjct: 132 GIFDPPLEFYRPLPPLAYLPLIIIWFGID--------ELPKVLLIFLSCFAPLALAARSG 183

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +  ++    + S   S  Q   ++ +P ++P ++  M +++  GW  +VA+EM+    
Sbjct: 184 MRSASQEQINAAYSMGASYMQVIRHVILPSALPDILVGMRIAIGFGWTTLVAAEMVAAN- 242

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
                 G+G  +  A        ++  ++ +  V +L+D L   L R ++ W  +
Sbjct: 243 -----MGLGQMVLNASNFLRTDIVIMGIIVIGVVAYLFDLLMRWLERRLVPWKGR 292



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 34/245 (13%)

Query: 360 AWQSIGYI-----VNHFTYQDVLYVIW--------------LGCITMFRVVVLIIIASII 400
            W  +  +     +   T Q V    +                  +MFRV    ++A I 
Sbjct: 57  LWFLVTNMGWVKPLFLPTPQAVFQQFYEYLTGQANDKPLWQHFLASMFRVFSAFLLACIT 116

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IPVGI +G          P  +     P   + PL++           L   LL+    
Sbjct: 117 AIPVGIAMGMSRFWRGIFDPPLEFYRPLPPLAYLPLIIIWFGI----DELPKVLLIFLSC 172

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +     +G  +   +    A S   +  +  R++ILP   P  + G   A G  W  
Sbjct: 173 FAPLALAARSGMRSASQEQINAAYSMGASYMQVIRHVILPSALPDILVGMRIAIGFGWTT 232

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
            + +E+ +         GLG  +  ++       V++G++++       +  +      +
Sbjct: 233 LVAAEMVA------ANMGLGQMVLNASNFLRTDIVIMGIIVIGVVAYLFDLLM-----RW 281

Query: 581 GTRCL 585
             R L
Sbjct: 282 LERRL 286


>gi|126435145|ref|YP_001070836.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|126234945|gb|ABN98345.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 279

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + FV    + +  L      + P  +++ +   +    L  + ++T L +   ++I +  
Sbjct: 47  VLFVGGWQLSSERLIPAFYVSSPAAVLERLGSLIRTGELWPHLTQTLLEVALGLLIGVPL 106

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V       S  LG  L+P +  + S+P +      +++F      KV       +F +
Sbjct: 107 GAVLGVALGFSTILGGWLLPYMMALYSLPRVVLAPLFIIWFGVGLISKVTMVVTMVVFVV 166

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F +          Q +  I RDL +V++S R S  Q   ++ VP  +P L+  + +S+  
Sbjct: 167 FYNVY--------QGVQEIDRDLLDVAKSLRASRLQTLRWIVVPSLVPWLITGLRLSIGI 218

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                V +E+I          G+G YI  +    D+  +   +  +  V    +QLL R
Sbjct: 219 ALIGAVIAELIAASQ------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLLKR 271



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 100/276 (36%), Gaps = 20/276 (7%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
                +L R           +  +     R    L      V+      ++ + +     
Sbjct: 6   GRARTRLSRGTAETDDALTRSDRRDAQRLRRIVTLGRIAIAVLFVGGWQLSSERLIPAFY 65

Query: 370 HFTYQDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
             +   VL  +               T+  V + ++I   +   +G+ +GF   +   + 
Sbjct: 66  VSSPAAVLERLGSLIRTGELWPHLTQTLLEVALGLLIGVPLGAVLGVALGFSTILGGWLL 125

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+   L + P  V  PL +       ++    +  +++F       +NV  G      D 
Sbjct: 126 PYMMALYSLPRVVLAPLFIIWFGVGLISKVTMVVTMVVFVVF----YNVYQGVQEIDRDL 181

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +VA S   +  +  R+I++P + P+ +TG   + G A   ++++E+ +       + GL
Sbjct: 182 LDVAKSLRASRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIA------ASQGL 235

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G YI  S+       V  G+ ++    +AL + L  
Sbjct: 236 GYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLLKR 271


>gi|297539397|ref|YP_003675166.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
 gi|297258744|gb|ADI30589.1| binding-protein-dependent transport systems inner membrane
           component [Methylotenera sp. 301]
          Length = 321

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     I+S+I +P+GI  G    +S   +PF +     PA  F  L V+ +  Y 
Sbjct: 127 SIQVIFWGFFISSLIGVPIGILCGTYSAVSRLNEPFIEFFRYLPAPAFGALAVAILGIYD 186

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    +++ GT +  +  +            E A +   + ++   ++I+PGI P 
Sbjct: 187 GPK----IAIIVIGTLFQQILIIANTTRKLDYSLLEAALTLGTSKFKLMMHVIIPGILPE 242

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                    G AW   IV+E+         ++G+  +I +      F  V   
Sbjct: 243 LYRDQRILLGWAWTYLIVAELIG------TSSGITWFITQQARYQHFDNVYAA 289



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 68/210 (32%), Gaps = 14/210 (6%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
              P   D   L +    +   +     IS L       L      +  +  P ++  + 
Sbjct: 109 TTAPEQRDGKWLHESLWHSIQVIFWGFFISSLIGVPIGILCGTYSAVSRLNEPFIEFFRY 168

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P   F    V         K        I  I    ++     +  +   +   L E +
Sbjct: 169 LPAPAFGALAVAILGIYDGPK--------IAIIVIGTLFQQILIIANTTRKLDYSLLEAA 220

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +   S ++   ++ +P  +P L  +  + +   W +++ +E+I          GI  +I
Sbjct: 221 LTLGTSKFKLMMHVIIPGILPELYRDQRILLGWAWTYLIVAELIGTSS------GITWFI 274

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               + Q    +  A++ +  +    D +L
Sbjct: 275 TQQARYQHFDNVYAAIIIIGVIGLGGDLIL 304


>gi|300022986|ref|YP_003755597.1| binding-protein-dependent transporters inner membrane component
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524807|gb|ADJ23276.1| binding-protein-dependent transport systems inner membrane
           component [Hyphomicrobium denitrificans ATCC 51888]
          Length = 269

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 104/250 (41%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   L   ++ ++L   +    P  + DI+    +   L ++ S T  R+  A + S+ 
Sbjct: 34  LLVLGLFWHVLAVVLQN-RYLPTPVAVFDIMMREAESGELWKHTSATLARVAIAFIFSMF 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                     K +         L +  ++P L  +T   ++F           ++AAI A
Sbjct: 93  IGTAIGLALGKYKTADKFFDAWLTLFLNLPALVTITLCYIWFGL--------TDVAAIVA 144

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +++ N+  +M +   ++ +DL E++  ++   W+   ++ +P   P         +S
Sbjct: 145 VALNKIPNVAVNMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAAAARSGLS 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  V+  E     +      G+G  +A+A +E D+  IL   L  + ++ + +  + +
Sbjct: 205 LVWKIVLVVEAFGRSN------GVGYRLAIAFQEFDVGTILAYALAFILIVQIIEFTILQ 258

Query: 262 PMIVWSNKFR 271
           P+    + +R
Sbjct: 259 PLQARVSAWR 268



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 86/249 (34%), Gaps = 23/249 (9%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------------ITMFRV 390
           ++ F +     + +G+ W  +  ++ +      + V  +                T+ RV
Sbjct: 24  IERFAWMAGSLLVLGLFWHVLAVVLQNRYLPTPVAVFDIMMREAESGELWKHTSATLARV 83

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  I +  I   +G+ +G           +  L    PA V   L            ++
Sbjct: 84  AIAFIFSMFIGTAIGLALGKYKTADKFFDAWLTLFLNLPALVTITLCYIWFGLT----DV 139

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       +  N+  GA +   D  E+A+ +    W+  R++ LP + P++   A
Sbjct: 140 AAIVAVALNKIPNVAVNMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAAAA 199

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +     W   +V E         R+ G+G  +A + ++     ++   L     V  + 
Sbjct: 200 RSGLSLVWKIVLVVEAFG------RSNGVGYRLAIAFQEFDVGTILAYALAFILIVQIIE 253

Query: 571 RFLWHPLYL 579
             +  PL  
Sbjct: 254 FTILQPLQA 262


>gi|86160414|ref|YP_467199.1| ABC transporter inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776925|gb|ABC83762.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 253

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 92/240 (38%), Gaps = 15/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL  +L+  +              P  +   +        L    +R+ +R+     +S+
Sbjct: 11  LLGALLIWELAARFGPWPHALLPGPFAVAARLAALAADGRLGAGVARSLVRLAQGYGLSV 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                     A+S  +  VL P    +Q++P + +L    ++F          +E A +F
Sbjct: 71  ALGVPLGVALARSPLVRSVLRPATIGLQALPSVCWLPLAALWFGL--------SEAAIVF 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +  +   ++  +   L   + +  + G +    + +P ++PG++  + +  
Sbjct: 123 VVLAGSLLAVAIATEDAVSGVDPGLLRAAGTLGIRGARFHLGVLLPSALPGILTGLKLGW 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           S  W  ++A E++       P  G+G  +       D   +L  +  ++ +  L DQ+LF
Sbjct: 183 SFAWRALMAGELL------FPAGGLGQLLNAGRARADPAQLLGVIAVIVALGVLVDQVLF 236



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     ++  + +P+G+ +   P + S ++P    L A P+  + PL         
Sbjct: 58  SLVRLAQGYGLSVALGVPLGVALARSPLVRSVLRPATIGLQALPSVCWLPLAALWFGLSE 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +++ G+   +        S         A +  I G R+   ++LP   P 
Sbjct: 118 A----AIVFVVLAGSLLAVAIATEDAVSGVDPGLLRAAGTLGIRGARFHLGVLLPSALPG 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW A +  E+           GLG  +     +    +++  + ++   
Sbjct: 174 ILTGLKLGWSFAWRALMAGELL------FPAGGLGQLLNAGRARADPAQLLGVIAVIVAL 227

Query: 566 VLALNRFLW 574
            + +++ L+
Sbjct: 228 GVLVDQVLF 236


>gi|332523537|ref|ZP_08399789.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314801|gb|EGJ27786.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 508

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 15/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A+L +KS+R   +++ I  I Q+IP L  L   +        G V       I+AIF   
Sbjct: 41  ASLLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMG---IGTVPAVSALVIYAIF--- 94

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +  +    L  I   L E   +F ++ W++     +P +MP ++  +  S       
Sbjct: 95  --PIIQNTITGLNGIEPSLVEAGTAFGMTKWERLKKFEIPIAMPVIMSGVRTSA----VM 148

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ +  +    ++I   G+GS+I L I   +   IL   ++   +  L++ +L
Sbjct: 149 IIGTATLA---SLIGAGGLGSFILLGIDRNNTDLILIGAISSALLAILFNSIL 198



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +      S  +     +    P+     L +  +    +     +S L+I+   + I+ 
Sbjct: 43  LLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMGIGTVP---AVSALVIY-AIFPIIQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G +       E  ++F +T W   +   +P   P  ++G  T+       + ++ +
Sbjct: 99  NTITGLNGIEPSLVEAGTAFGMTKWERLKKFEIPIAMPVIMSGVRTSAVMIIGTATLASL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 159 IGAG-------GLGSFILLGIDRNNTDLILIGAISSALLAILFNSIL 198


>gi|309791710|ref|ZP_07686201.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308226260|gb|EFO79997.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 305

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 96/283 (33%), Gaps = 19/283 (6%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R I     +F  P           LG+    F   +       RV  +  +        +
Sbjct: 12  RLIPQVGASFKVPADYLTPVALVVLGIFGVTFGIAYRLPTQRPRVLAIYRVLIVLGAVLI 71

Query: 356 AIGIAWQSIGYIVNHFTYQ---------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
              +A +        F            D   ++     +M  +VV  +I  I  +  G+
Sbjct: 72  PWEVASRLAWIKPPFFPSPSKVIGVYIEDSSKLLLSIAYSMRLLVVGYLIGCIAGVSFGL 131

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+   +S+    + +L+   PA  + PL +        N       L+ F + + ++ 
Sbjct: 132 ALGWSRRVSNWSMFWIRLIGPIPATAWIPLAIVIFP----NSFTAGVFLIAFASWFPVMM 187

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              +G +  P    E A +      R  R +++P   P    G   + G A+   IV+E+
Sbjct: 188 LTWSGVAGVPKALLEAAQTLGADEKRLLRQVVIPAALPSVFVGLFMSLGTAFAILIVAEM 247

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                      GLG YI  +     + +V   +L++    + +
Sbjct: 248 LG------VKAGLGWYITWAQGWSEYHKVYAAMLVLGALFITV 284



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 80/205 (39%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L    + +   ++   +I  +    +      SRR+    +  + ++  IP   ++
Sbjct: 100 DSSKLLLSIAYSMRLLVVGYLIGCIAGVSFGLALGWSRRVSNWSMFWIRLIGPIPATAWI 159

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V F N +         A +F I  +  + +    +  +  +P+ L E +++     
Sbjct: 160 PLAIVIFPNSFT--------AGVFLIAFASWFPVMMLTWSGVAGVPKALLEAAQTLGADE 211

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +    + +P ++P +   + MS+   +  ++ +EM+ V        G+G YI  A    
Sbjct: 212 KRLLRQVVIPAALPSVFVGLFMSLGTAFAILIVAEMLGVKA------GLGWYITWAQGWS 265

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +   +  AML +  +       +F+
Sbjct: 266 EYHKVYAAMLVLGALFITVVSGIFK 290


>gi|325110139|ref|YP_004271207.1| substrate-binding region of ABC-type glycine betaine transporter
           [Planctomyces brasiliensis DSM 5305]
 gi|324970407|gb|ADY61185.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Planctomyces brasiliensis DSM 5305]
          Length = 502

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 66/150 (44%), Gaps = 2/150 (1%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109
                +     L    ++    +  +++ +++       ++A++R  G +++   +I+Q+
Sbjct: 286 TTRETSTLSSRLATTTAQHLWLVSISLLAAIVVAIPAGVISARNRLAGQLILGFTEIVQT 345

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  L    + F+++  G  + +    I A+F   +  +  +    L  IP  L+E +
Sbjct: 346 IPGLALLVLIGILFVHV--GLPMVSPWPVIVALFLYSLLPIVRNTLAGLDGIPTSLQESA 403

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
               L+ W + W + +P + P ++  +  +
Sbjct: 404 AVLGLTEWNRLWRIELPLASPYILTGIKTT 433



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 4/222 (1%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           VA     +  GY     T      +       ++ V + ++ A ++ IP G+        
Sbjct: 273 VAAAFVHEQFGYETTRETSTLSSRLATTTAQHLWLVSISLLAAIVVAIPAGVISARNRLA 332

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN--LWLSLLMIFGTQWYILFNVIAGA 472
              I  F +++   P      L+     +  L       + + +   +   I+ N +AG 
Sbjct: 333 GQLILGFTEIVQTIPGLALLVLIGILFVHVGLPMVSPWPVIVALFLYSLLPIVRNTLAGL 392

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P   +E A+   +T W     I LP   PY +TG  T        + +  +   G  
Sbjct: 393 DGIPTSLQESAAVLGLTEWNRLWRIELPLASPYILTGIKTTAVINVGYAALGGLIGAGGY 452

Query: 533 HLRT-TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                TGL     +   +G+ P  VL +++   F + L RF+
Sbjct: 453 GQPIMTGLRLNNTQLMLEGAIPAAVLALVVKFLF-IGLERFV 493


>gi|303231586|ref|ZP_07318311.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302513749|gb|EFL55766.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           atypica ACS-049-V-Sch6]
          Length = 511

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 75/187 (40%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L + +I+++   V   L  + RR     + +++ + +IP +  L F + +          
Sbjct: 28  LLSSIIAIILGLVAGILLNEYRRAVNPTMMVINFLYTIPSISMLGFLIPFSGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  M  + Y  L +I +++ E + S  LS  Q+  Y+ +P + P +
Sbjct: 82  --NATAVIALVIYALLPMVRNTYTGLSSIDKEMIEAATSLGLSHVQRLRYIELPLAFPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I   +    +   L +  + 
Sbjct: 140 MVGIR-------NMLVMTIALTGVASFIGAGGLGVAIYRGITTNNTTMTVAGSLLIAFLA 192

Query: 253 FLYDQLL 259
            + D +L
Sbjct: 193 LIMDGVL 199



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQP---FAQLLAAFPANVFFPLVVSCVS 442
           ++  VV+ +++SII I +G+  G         + P       L   P+      ++    
Sbjct: 20  LWEHVVIALLSSIIAIILGLVAGILLNEYRRAVNPTMMVINFLYTIPSISMLGFLIPFSG 79

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             +    + L +  +      ++ N   G S+   +  E A+S  ++  +  RYI LP  
Sbjct: 80  IGNATAVIALVIYALL----PMVRNTYTGLSSIDKEMIEAATSLGLSHVQRLRYIELPLA 135

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  + G         N  +++   +     +   GLG  I       +    V G L++
Sbjct: 136 FPVIMVGIR-------NMLVMTIALTGVASFIGAGGLGVAIYRGITTNNTTMTVAGSLLI 188

Query: 563 CCFVLALNRFL 573
               L ++  L
Sbjct: 189 AFLALIMDGVL 199


>gi|89897193|ref|YP_520680.1| hypothetical protein DSY4447 [Desulfitobacterium hafniense Y51]
 gi|219666941|ref|YP_002457376.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|89336641|dbj|BAE86236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537201|gb|ACL18940.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 260

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 98/250 (39%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L+   +  LL  + +  +P     I  +      L ++A  T       + +S+L
Sbjct: 17  VLLILLIFWYLVTLLEMVPKFMLPSPGDVIRALAGSFPELMKHAQITLTEAFIGLALSIL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F  A L  +   L     PIL I Q+IP +      V++       K+    L   F 
Sbjct: 77  LAFWIALLMDRFDALYKAFHPILVITQTIPTVAIAPLLVLWLGYDMAPKITLVVLTCFF- 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   MT ++     +  +D   + R+     WQ + Y+ +P ++PG    + +S+S
Sbjct: 136 -------PMTIALLGGFKSSDQDAMNLMRAMGAKKWQIYRYIKLPNALPGFFSGLRISVS 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 V +E +          G+G Y+     +     + A+++ ++ +  V+    +L
Sbjct: 189 YSIVGAVIAEWLGGNS------GLGVYMTRVRKSYSFDKMFAVIFLIIILSLVLMKCVEL 242

Query: 259 LFRPMIVWSN 268
           L R  + W+ 
Sbjct: 243 LERKAMPWAQ 252



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 80/227 (35%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L IFW+ V     +          V          ++    IT+    + + ++ ++  
Sbjct: 20  ILLIFWYLVTLLEMVPKFMLPSPGDVIRALAGSFPELMKHAQITLTEAFIGLALSILLAF 79

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +     +     P   +    P     PL+V  + Y           L++    +
Sbjct: 80  WIALLMDRFDALYKAFHPILVITQTIPTVAIAPLLVLWLGY----DMAPKITLVVLTCFF 135

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  +     W+ +RYI LP   P + +G   +   +   ++
Sbjct: 136 PMTIALLGGFKSSDQDAMNLMRAMGAKKWQIYRYIKLPNALPGFFSGLRISVSYSIVGAV 195

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E           +GLG Y+    +  SF ++   + ++    L L
Sbjct: 196 IAEWLGG------NSGLGVYMTRVRKSYSFDKMFAVIFLIIILSLVL 236


>gi|108799491|ref|YP_639688.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119868604|ref|YP_938556.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|108769910|gb|ABG08632.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119694693|gb|ABL91766.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
          Length = 279

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + FV    + +  L      + P  +++ +   +    L  + ++T L +   ++I +  
Sbjct: 47  VLFVGGWQLSSERLIPAFYVSSPAAVLERLGSLIRTGELWPHLTQTLLEVALGLLIGVPL 106

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V       S  LG  L+P +  + S+P +      +++F      KV       +F +
Sbjct: 107 GAVLGVALGFSTILGGWLLPYMMALYSLPRVVLAPLFIIWFGVGLISKVTMVVTMVVFVV 166

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F +          Q +  I RDL +V++S R +  Q   ++ VP  +P L+  + +S+  
Sbjct: 167 FYNVY--------QGVQEIDRDLLDVAKSLRANRLQTLRWIVVPSLVPWLITGLRLSIGI 218

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                V +E+I          G+G YI  +    D+  +   +  +  V    +QLL R
Sbjct: 219 ALIGAVIAELIAASQ------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLLKR 271



 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 99/276 (35%), Gaps = 20/276 (7%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
                +L R           +  +     R    L      V+      ++ + +     
Sbjct: 6   GRARTRLSRGTAKTDDALTRSDRRDAQRLRRIVTLGRIAIAVLFVGGWQLSSERLIPAFY 65

Query: 370 HFTYQDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
             +   VL  +               T+  V + ++I   +   +G+ +GF   +   + 
Sbjct: 66  VSSPAAVLERLGSLIRTGELWPHLTQTLLEVALGLLIGVPLGAVLGVALGFSTILGGWLL 125

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+   L + P  V  PL +       ++    +  +++F       +NV  G      D 
Sbjct: 126 PYMMALYSLPRVVLAPLFIIWFGVGLISKVTMVVTMVVFVVF----YNVYQGVQEIDRDL 181

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +VA S      +  R+I++P + P+ +TG   + G A   ++++E+ +       + GL
Sbjct: 182 LDVAKSLRANRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIA------ASQGL 235

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           G YI  S+       V  G+ ++    +AL + L  
Sbjct: 236 GYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLLKR 271


>gi|94313257|ref|YP_586466.1| ABC transporter permease [Cupriavidus metallidurans CH34]
 gi|93357109|gb|ABF11197.1| ABC transporter, permease protein; possible sulfonate/taurine
           transporter inner membrane component [Cupriavidus
           metallidurans CH34]
          Length = 298

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 92/245 (37%), Gaps = 16/245 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           N+  +  F+L    I  +   I       P  +++     +    L  +   + LR +S 
Sbjct: 54  NLLGVALFLLAWEAIPHVFEWINPALFPPPSKVLEAAIPLIRSGELFGHIGMSLLRAISG 113

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            VI+L+       L A+   L  V  P+L   +S+P L  +   V++F      KV    
Sbjct: 114 FVIALVLGISVGVLTARIPLLQYVSEPVLHGFRSVPSLAVVPLAVLWFGIGEAPKVALIA 173

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A F         +  + +  + +        + S      Q+ + + +P ++P ++  
Sbjct: 174 WGAFF--------PIWITTFIGVRDTNVVYLRSAASLGAGRLQQLFLVVLPAALPFILAG 225

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  +++     +VA+E+           GI   ++L  +   +  +   ++ +    FL 
Sbjct: 226 VRQALAVSLVVLVAAEL------SGSTQGIAYMMSLGHQLFQVEIMFIGLVLLGVFGFLA 279

Query: 256 DQLLF 260
           D+L  
Sbjct: 280 DRLFL 284



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++ R +   +IA ++ I VG+     P +    +P      + P+    PL
Sbjct: 97  GELFGHIGMSLLRAISGFVIALVLGISVGVLTARIPLLQYVSEPVLHGFRSVPSLAVVPL 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V                L+ +G  + I      G       +   A+S      +    
Sbjct: 157 AVLWFGIGEAPK----VALIAWGAFFPIWITTFIGVRDTNVVYLRSAASLGAGRLQQLFL 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P+ + G   A   +    + +E+         T G+   ++   +      + 
Sbjct: 213 VVLPAALPFILAGVRQALAVSLVVLVAAEL------SGSTQGIAYMMSLGHQLFQVEIMF 266

Query: 557 LGVLIMCCFVLALNRFLW---HPLYLY 580
           +G++++  F    +R        L+ +
Sbjct: 267 IGLVLLGVFGFLADRLFLLVTRKLFPW 293


>gi|291295777|ref|YP_003507175.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290470736|gb|ADD28155.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 254

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 81/214 (37%), Gaps = 13/214 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 V+     T++  +    IA +  + +G  +G    ++  + P      + P   
Sbjct: 47  LPVWGVVLGHAWQTLWTTLAGFGIAVVAGVLLGAAVGTSKPLNLALYPILVGFNSVPKAA 106

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++V           +   L     + + I+ NV  G ++ P + +EV      +   
Sbjct: 107 LVPVLVLWFGIG----TVPAILTAFLISFFPIVVNVATGLASVPPELREVLRVLGSSRLE 162

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + +P   PY+      A   A+  +++SE+A+         G+G  +  ++ + + 
Sbjct: 163 AFTRVSIPFSMPYFFASLKVAITLAFVGAVISEIAASQK------GIGYLMTSASSQFNV 216

Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
           P V  G+L++    +AL      L   L  +  R
Sbjct: 217 PLVFGGLLLIAIMGIALYAVFAILERRLVGWAYR 250



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 99/247 (40%), Gaps = 17/247 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + V+  +++ L  I    +P     I  +      +  +A +T    L+   I+++   +
Sbjct: 18  LFVLWELSVRLFKIPPFVLPAPSQAIASLLPVWGVVLGHAWQTLWTTLAGFGIAVVAGVL 77

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                  S+ L + L PIL    S+P    +   V++F            + AI   F  
Sbjct: 78  LGAAVGTSKPLNLALYPILVGFNSVPKAALVPVLVLWFGIG--------TVPAILTAFLI 129

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + +  ++   L ++P +L EV R    S  + F  + +PFSMP    ++ ++++  + 
Sbjct: 130 SFFPIVVNVATGLASVPPELREVLRVLGSSRLEAFTRVSIPFSMPYFFASLKVAITLAFV 189

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             V SE+           GIG  +  A  + ++  +   +L +  +         +L R 
Sbjct: 190 GAVISEIAA------SQKGIGYLMTSASSQFNVPLVFGGLLLIAIMGIALYAVFAILERR 243

Query: 263 MIVWSNK 269
           ++ W+ +
Sbjct: 244 LVGWAYR 250


>gi|226309355|ref|YP_002769315.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188472|dbj|BAH36576.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 262

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +   + +A ++ I  G+ +   P  +    PF Q   A PA    P +        
Sbjct: 62  SLTNLAFGLAVALVVGIGAGLLLALFPLAADIADPFLQFFRAIPALAVLPALFIVFGTGS 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 ++    FG  W IL N + G  +     + VA S+ I        ++LPG  P 
Sbjct: 122 TGNVAAIA----FGAVWPILLNTLDGIRSIDPSIRLVARSYRIRTPLLVTQVLLPGAMPQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T+        + SE+      ++ T G+G ++  + +  +  ++  G+L++   
Sbjct: 178 ITVGIRTSLAIGVVIMVGSEM------YVSTAGIGHFVIVAQQTFAIADMWSGILLLGII 231

Query: 566 VLALN 570
              LN
Sbjct: 232 GYVLN 236



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 20/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVIS 79
           L   ++I ++        ++     +  I    +D    P +A     +   +   + ++
Sbjct: 14  LWLPILIVVVWYFGSESSKSPYFPPLSRIWKAFVDNWFGPGFAHDIVPSLTNLAFGLAVA 73

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+       L A       +  P L   ++IP L  L    + F     G         +
Sbjct: 74  LVVGIGAGLLLALFPLAADIADPFLQFFRAIPALAVLPALFIVFGTGSTGN--------V 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            AI    VW +  +    + +I   +  V+RS+R+        + +P +MP +   +  S
Sbjct: 126 AAIAFGAVWPILLNTLDGIRSIDPSIRLVARSYRIRTPLLVTQVLLPGAMPQITVGIRTS 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ-- 257
           ++ G   +V SEM       +   GIG ++ +A +   +  +   +L +  + ++ +   
Sbjct: 186 LAIGVVIMVGSEM------YVSTAGIGHFVIVAQQTFAIADMWSGILLLGIIGYVLNLGY 239

Query: 258 -LLFRPMIVWSNK 269
            ++ R ++ W  +
Sbjct: 240 GVIERWLLRWQPR 252


>gi|126347930|emb|CAJ89650.1| putative transporter [Streptomyces ambofaciens ATCC 23877]
          Length = 285

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  VL      + L  ++    P  I D     +D   LP + + +  R L  ++  + 
Sbjct: 46  VLLLVLWTAGTGLGLVDVRSLPAPWTIADTAGQLIDNGKLPSHLATSAQRALLGLLFGVA 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A +A  SR    V+   + I ++IP L  +   +++F      KVI   L     
Sbjct: 106 AGLLLALVAGLSRVGEAVIDGPVQIKRAIPSLALIPLLILWFGIGETMKVITIALGVFVP 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++           +  L  I     E++ + RL       ++ +P ++PG +  M  +++
Sbjct: 166 VY--------IHTHNGLRAIDSRYAELAETVRLGRLAFVRHVVLPGALPGFLLGMRFAVT 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
           G W  +V  E +          GIG  + LA        I+  ++    +  + D   +L
Sbjct: 218 GAWLALVVVEQV------NATSGIGYMMELARTYGQTDVIIVGLVVYGLLGLVSDALVRL 271

Query: 259 LFRPMIVW 266
           + R  + W
Sbjct: 272 VERRALSW 279



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 90/264 (34%), Gaps = 17/264 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            RTL V                   + +      V+     G+    +  +   +T  D 
Sbjct: 16  ARTLAVRPPRPRRRRPGPGRPLPYGWAIGPVLLLVLWTAGTGLGLVDVRSLPAPWTIADT 75

Query: 377 -------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    +      +  R ++ ++      + + +  G      + I    Q+  A P
Sbjct: 76  AGQLIDNGKLPSHLATSAQRALLGLLFGVAAGLLLALVAGLSRVGEAVIDGPVQIKRAIP 135

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL++               + +  G    +  +   G  A  + + E+A +  + 
Sbjct: 136 SLALIPLLILWFGIGET----MKVITIALGVFVPVYIHTHNGLRAIDSRYAELAETVRLG 191

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
              + R+++LPG  P ++ G   A  GAW A +V E  +       T+G+G  +  +   
Sbjct: 192 RLAFVRHVVLPGALPGFLLGMRFAVTGAWLALVVVEQVN------ATSGIGYMMELARTY 245

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
           G    +++G+++     L  +  +
Sbjct: 246 GQTDVIIVGLVVYGLLGLVSDALV 269


>gi|328951257|ref|YP_004368592.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451581|gb|AEB12482.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 251

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +    T       I     ++ R+     +A    + +G+     P   +  +    +
Sbjct: 38  AVLRALPTAAQDPEFIASVGRSLLRLGAGFALALGSGVTIGLLASILPIFRAYARALLSI 97

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L A P   + PL++  + +        +  ++     + I  N IA            A 
Sbjct: 98  LQAVPPIAYLPLLILILGFGDR----AILWVITLAALFPIAINAIAAVEQMRWVHIAAAR 153

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +           + LP   P  + GA    G AW A I +E+           GLG  IA
Sbjct: 154 NLGARPHHLALRVYLPASLPTLLAGAQAGFGNAWRALIAAEMFGG-----TNVGLGWSIA 208

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            + + G    V+LG+  +     A++    + L+    R L
Sbjct: 209 TAAQVGDMARVLLGITTIGLLSAAID----NGLFTLAKRKL 245



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 83/224 (37%), Gaps = 17/224 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            ++  +P             R+ LR+ +   ++L        LA+           +L I
Sbjct: 38  AVLRALPTAAQDPEFIASVGRSLLRLGAGFALALGSGVTIGLLASILPIFRAYARALLSI 97

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +Q++P + +L   ++             + A ++ I  + ++ +  +   ++  +     
Sbjct: 98  LQAVPPIAYLPLLILILG--------FGDRAILWVITLAALFPIAINAIAAVEQMRWVHI 149

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             +R+           + +P S+P L+          W  ++A+EM    +      G+G
Sbjct: 150 AAARNLGARPHHLALRVYLPASLPTLLAGAQAGFGNAWRALIAAEMFGGTNV-----GLG 204

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF----RPMIVW 266
             IA A +  D+  +L  + T+  +    D  LF    R ++ W
Sbjct: 205 WSIATAAQVGDMARVLLGITTIGLLSAAIDNGLFTLAKRKLLRW 248


>gi|319940944|ref|ZP_08015281.1| binding-protein-dependent transport system inner membrane component
           [Sutterella wadsworthensis 3_1_45B]
 gi|319805517|gb|EFW02312.1| binding-protein-dependent transport system inner membrane component
           [Sutterella wadsworthensis 3_1_45B]
          Length = 264

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     +T++  V+  +I +I  + VG+W+   P  ++   PF +   + P  +
Sbjct: 60  WFAGGEIYSHLGVTLYETVMAFVIGTIAGLAVGLWLALSPVAAAVADPFIKGFNSMPRVI 119

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G      +    A     T  +
Sbjct: 120 LAPIFAVWFGLGPASKIALGFTLVFFI----VFFNVYQGVREVNPNVLASAKMLGATHRQ 175

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ LP    +  +   T+ G A+ A+++ E            G+G  I ++      
Sbjct: 176 LLRYVYLPSAMSWVFSSLHTSVGMAFVAAVIGEYLG------SAEGVGYLILQAETTFDM 229

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+ G+L++    L L+R +
Sbjct: 230 NTVMAGILVLTACALILDRIV 250



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 17/208 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + A VI  +         A S     V  P +    S+P +       V+F
Sbjct: 69  HLGVTLYETVMAFVIGTIAGLAVGLWLALSPVAAAVADPFIKGFNSMPRVILAPIFAVWF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K+        F +F        F++YQ +  +  ++   ++    +  Q   Y+
Sbjct: 129 GLGPASKIALGFTLVFFIVF--------FNVYQGVREVNPNVLASAKMLGATHRQLLRYV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  +  ++  S+   +   V  E +   +      G+G  I  A    D+  ++ 
Sbjct: 181 YLPSAMSWVFSSLHTSVGMAFVAAVIGEYLGSAE------GVGYLILQAETTFDMNTVMA 234

Query: 244 AMLTMLGVIFLYDQL---LFRPMIVWSN 268
            +L +     + D++   + + ++ W  
Sbjct: 235 GILVLTACALILDRIVTEVEKRLMRWQP 262


>gi|319783976|ref|YP_004143452.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169864|gb|ADV13402.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 274

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 96/236 (40%), Gaps = 14/236 (5%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +   +    P  +  ++        L  +   T  R+ +A +++++   V   L    RR
Sbjct: 49  VWPSRAFPGPGQVWQVLLREAASGDLLYHLGVTLGRVAAAYIVAMIIGSVIGVLLGSYRR 108

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +     P + +  +IP L  +    ++F           E AAI A+  +++ N+  +M 
Sbjct: 109 VDRFFNPWVILFLNIPALVVIVLGYIWFGLN--------EAAAIGAVAVNKIPNVVVTMR 160

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           +    +     E++  +R     +  ++ +P   P L       ++  W  V+  E++  
Sbjct: 161 EGARTLDPSYAEMATVYRFGRLDRIRHILLPQLQPHLAAASRSGIALIWKIVLVVELLGR 220

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            +      G+G  I L  +  D+ AIL   L  + V+ + + LL +P+   + ++R
Sbjct: 221 SN------GVGFQIHLYFQLFDVAAILAYTLAFVAVMLVIELLLVQPVERHATRWR 270



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 13/222 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q    ++      D+LY +    +T+ RV    I+A II   +G+ +G    +     P+
Sbjct: 60  QVWQVLLREAASGDLLYHLG---VTLGRVAAAYIVAMIIGSVIGVLLGSYRRVDRFFNPW 116

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             L    PA V   L                   +       ++  +  GA      + E
Sbjct: 117 VILFLNIPALVVIVLGYIWFGL----NEAAAIGAVAVNKIPNVVVTMREGARTLDPSYAE 172

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +A+ +        R+I+LP + P+    + +     W   +V E+        R+ G+G 
Sbjct: 173 MATVYRFGRLDRIRHILLPQLQPHLAAASRSGIALIWKIVLVVELLG------RSNGVGF 226

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            I    +      ++   L     +L +   L  P+  + TR
Sbjct: 227 QIHLYFQLFDVAAILAYTLAFVAVMLVIELLLVQPVERHATR 268


>gi|172057764|ref|YP_001814224.1| substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sibiricum 255-15]
 gi|171990285|gb|ACB61207.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sibiricum 255-15]
          Length = 505

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 67/178 (37%), Gaps = 15/178 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L Q         + ++VI+ +         ++ ++     + +  ++Q+IP L  L   
Sbjct: 14  ELLQALIEHIQLSVLSLVIACVIAIPLGIYLSRHKKFSEWSIGVTSVIQTIPSLALLGLM 73

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +               + ++ A+    +  +  + Y  L  +   L+E +R+  ++  Q 
Sbjct: 74  IPLVGIG--------TVPSVIALVLYALLPIVRNTYTGLAEVDPSLKEAARACGMTPMQS 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
              + +P ++P ++  +  +M         + +I  G       G+GS I L I   D
Sbjct: 126 LMKVELPLALPVMMAGIRTAMVLIIGTATIAALIGAG-------GLGSIILLGIDRND 176



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 11/161 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++IA +I IP+GI++      S        ++   P+     L++  V    +   +
Sbjct: 27  VLSLVIACVIAIPLGIYLSRHKKFSEWSIGVTSVIQTIPSLALLGLMIPLVGIGTVPSVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      I+ N   G +      KE A +  +T  +    + LP   P  + G 
Sbjct: 87  ALVLYALL----PIVRNTYTGLAEVDPSLKEAARACGMTPMQSLMKVELPLALPVMMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            TA       + ++ +   G       GLG+ I    ++  
Sbjct: 143 RTAMVLIIGTATIAALIGAG-------GLGSIILLGIDRND 176


>gi|229494674|ref|ZP_04388432.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
 gi|229318341|gb|EEN84204.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
          Length = 262

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +   + +A ++ I  G+ +   P  +    PF Q   A PA    P +        
Sbjct: 62  SLTNLAFGLAVALVVGIGAGLLLALFPLAADIADPFLQFFRAVPALAVLPALFIVFGTGS 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 ++    FG  W IL N + G  +     + VA S+ I        ++LPG  P 
Sbjct: 122 TGNVAAIA----FGAVWPILLNTLDGIRSIDPSIRLVARSYRIRTPLLVTQVLLPGAMPQ 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T+        + SE+      ++ T G+G ++  + +  +  ++  G+L++   
Sbjct: 178 ITVGIRTSLAIGVVIMVGSEM------YVSTAGIGHFVIVAQQTFAIADMWSGILLLGII 231

Query: 566 VLALN 570
              LN
Sbjct: 232 GYVLN 236



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 96/253 (37%), Gaps = 20/253 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVIS 79
           L   ++I ++        ++     +  I    +D    P +A     +   +   + ++
Sbjct: 14  LWLPILIVVVWYFGSESSKSPYFPPLSRIWKAFVDNWFGPGFAHDVVPSLTNLAFGLAVA 73

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L+       L A       +  P L   +++P L  L    + F     G         +
Sbjct: 74  LVVGIGAGLLLALFPLAADIADPFLQFFRAVPALAVLPALFIVFGTGSTGN--------V 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            AI    VW +  +    + +I   +  V+RS+R+        + +P +MP +   +  S
Sbjct: 126 AAIAFGAVWPILLNTLDGIRSIDPSIRLVARSYRIRTPLLVTQVLLPGAMPQITVGIRTS 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ-- 257
           ++ G   +V SEM       +   GIG ++ +A +   +  +   +L +  + ++ +   
Sbjct: 186 LAIGVVIMVGSEM------YVSTAGIGHFVIVAQQTFAIADMWSGILLLGIIGYVLNLGY 239

Query: 258 -LLFRPMIVWSNK 269
            ++ R ++ W  +
Sbjct: 240 GVIERWLLRWQPR 252


>gi|159039787|ref|YP_001539040.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157918622|gb|ABW00050.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 282

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 87/245 (35%), Gaps = 11/245 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC- 384
             P   + +        +   FW+ V  G+ +         +    ++ D   V+     
Sbjct: 26  WRPTQPVNVGLPLLGLVIAMAFWWLVTTGLGLVHPAALPPPLAVAESFVDARGVLIPALG 85

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT    V   +++++  + +GI +    H+     P    + A P     PL+V    + 
Sbjct: 86  ITTVMTVQGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLVVSFGWG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + +++     + I+ + + G +  P D  E+A S H + W+ +R +  P   P
Sbjct: 146 TK----PILIMVFLLCFFPIVLSTVTGLTTTPADLAELARSLHASWWQSFRKVRFPAALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A   A   +++ E       +    GLG  I +    G        ++++  
Sbjct: 202 QVFVGLKVAMPLAAIGAVIGEF------YSDRPGLGYQILQYNGVGETATAWAAIVLIAV 255

Query: 565 FVLAL 569
             + L
Sbjct: 256 MSIGL 260



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 18/233 (7%)

Query: 22  LLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           LL  V+ +    ++  G+       +P  +            L      TT+  +   ++
Sbjct: 38  LLGLVIAMAFWWLVTTGLGLVHPAALPPPLAVAESFVDARGVLIPALGITTVMTVQGFLL 97

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S +   +     A SR L  +  P+L  + ++P +      VV F               
Sbjct: 98  SAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLVVSFGWG--------TKPI 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  +F    + +  S    L   P DL E++RS   S WQ F  +  P ++P +   + +
Sbjct: 150 LIMVFLLCFFPIVLSTVTGLTTTPADLAELARSLHASWWQSFRKVRFPAALPQVFVGLKV 209

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +M        A+   V+G+     PG+G  I          A  +A + ++ V
Sbjct: 210 AMPL------AAIGAVIGEFYSDRPGLGYQILQ-YNGVGETATAWAAIVLIAV 255


>gi|288576399|ref|ZP_05978724.2| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria mucosa ATCC
           25996]
 gi|288565600|gb|EFC87160.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Neisseria mucosa ATCC
           25996]
          Length = 509

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q         L A++ ++      A   A  RR    ++ + +I+Q+IP L  L 
Sbjct: 9   PADLWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +     P  +I   L A+  IF         + Y  L  I   ++E   +F LS W
Sbjct: 69  LLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLSQIDPAIKEAHTAFGLSRW 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q  W + +P ++P ++  +  +
Sbjct: 121 QALWRIELPMALPAMISGIRTA 142



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 5/150 (3%)

Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W   +   R+ ++ ++ ++ + +P+ +W+  +   +  +     +L   P+     L++
Sbjct: 12  LWQATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLI 71

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V        + L+L  +      I  N   G S      KE  ++F ++ W+    I 
Sbjct: 72  PFVGIGSPPVLIALTLYALL----PIFQNTYLGLSQIDPAIKEAHTAFGLSRWQALWRIE 127

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           LP   P  ++G  TA       + ++ +  
Sbjct: 128 LPMALPAMISGIRTASVLIIGTATLAALIG 157


>gi|224367226|ref|YP_002601389.1| ABC-type transporter, permease protein
           (nitrate/sulfonate/bicarbonate transporter)
           [Desulfobacterium autotrophicum HRM2]
 gi|223689942|gb|ACN13225.1| ABC-type transporter, permease protein
           (nitrate/sulfonate/bicarbonate transporter)
           [Desulfobacterium autotrophicum HRM2]
          Length = 248

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             + FR V  ++I   +  P+GI +G        + PF  +    P  V  P+V+     
Sbjct: 58  AASTFRAVTAMVIGWAVAFPLGILMGSSRQFDKFLSPFVTMTYPIPKVVLLPVVLLLFGL 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +    +++     + +L     G         +   S   + W+ +    LP   
Sbjct: 118 G----DFSKIIIISLILGYQVLVATRDGVRGIHPKHLDSIRSLGASKWQLFWEGYLPAAL 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  T      G +       E  +       T GLG  I ++  +  F  + +G+  M 
Sbjct: 174 PHGFTALRLNSGVSVAVLFFVESFA------TTEGLGYLIMDAWGQMDFNAMFVGIFGMS 227

Query: 564 CFVLALN 570
              + LN
Sbjct: 228 LLGVILN 234



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 15/248 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F+ R   P    +L   L+  ++ ILL        P D V      L       + + +
Sbjct: 2   SFLRRIAVPYAITILVVYLIWKVMAILLSR-NVLPCPEDAVLAFFRALMTSEFWHHFAAS 60

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T R ++AMVI     F    L   SR+    L P + +   IP +  L   ++ F     
Sbjct: 61  TFRAVTAMVIGWAVAFPLGILMGSSRQFDKFLSPFVTMTYPIPKVVLLPVVLLLFGLGDF 120

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K+I   L   + +  +            +  I     +  RS   S WQ FW   +P +
Sbjct: 121 SKIIIISLILGYQVLVA--------TRDGVRGIHPKHLDSIRSLGASKWQLFWEGYLPAA 172

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P     + ++       +   E            G+G  I  A  + D  A+   +  M
Sbjct: 173 LPHGFTALRLNSGVSVAVLFFVESFA------TTEGLGYLIMDAWGQMDFNAMFVGIFGM 226

Query: 249 LGVIFLYD 256
             +  + +
Sbjct: 227 SLLGVILN 234


>gi|170692339|ref|ZP_02883502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142769|gb|EDT10934.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 274

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 10/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            ++  + +     +     IT+   V+   + + + + VG+W+   P  S+   P+ +  
Sbjct: 57  VLLRIWEWFTTGEIYLHLWITLLETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAA 116

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            + P  +  P+          +       L+ F     + FNV  G           A  
Sbjct: 117 NSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARM 172

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
               G +  RY+ LP    +  +   T+ G A+  S+V E            G+G  I +
Sbjct: 173 LGANGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQ 226

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        V  G+L++  F L L+  +
Sbjct: 227 AEGTFDINTVFAGILVLTAFALILDAIV 254



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L  + A  +            A S     +  P +    S+P +       V+F
Sbjct: 73  HLWITLLETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWF 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV        F +F        F++YQ +  +   +   +R    +G Q   Y+
Sbjct: 133 GLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANGKQLLRYV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 185 YLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDINTVFA 238

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +L +     + D ++    R ++ W  K
Sbjct: 239 GILVLTAFALILDAIVGVGERHLMKWQPK 267


>gi|145596388|ref|YP_001160685.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145305725|gb|ABP56307.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 282

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 10/251 (3%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
              V R               ++  L  +W        +  A       V     +    
Sbjct: 20  APAVRRRRSIPVGSAGLPLLGLAIALTCWWLVTTGFGLVHPAALPPPQAVGTSLVETGDV 79

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    IT    VV  +++++  + +GI +    H+     P    + A P     PL+V
Sbjct: 80  LVPALGITTLMTVVGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLV 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +        +  ++     + I+ +   G +  P D  E+A S H + W+ +R + 
Sbjct: 140 VSFGWGAK----PILTMVFLLCFFPIVLSTATGLTTTPADLAELARSLHASWWQSFRKVR 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P    G   A   A   +++ E       +    GLG  I +    G        
Sbjct: 196 FPAALPQVFVGLKVAMPLAAIGAVIGEF------YSDQPGLGYQILQYNGVGETATAWAA 249

Query: 559 VLIMCCFVLAL 569
           ++++    + L
Sbjct: 250 IVLIAAMSIGL 260



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 91/270 (33%), Gaps = 23/270 (8%)

Query: 6   ILPPFISRRIFP------NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           + P    RR  P       +  L   +    ++      +    +P        +     
Sbjct: 19  LAPAVRRRRSIPVGSAGLPLLGLAIALTCWWLVTTGFGLVHPAALPPPQAVGTSLVETGD 78

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      TTL  +   ++S +   +     A SR L  +  P+L  + ++P +      
Sbjct: 79  VLVPALGITTLMTVVGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLL 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           VV F               +  +F    + +  S    L   P DL E++RS   S WQ 
Sbjct: 139 VVSFGWG--------AKPILTMVFLLCFFPIVLSTATGLTTTPADLAELARSLHASWWQS 190

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  +  P ++P +   + ++M        A+   V+G+     PG+G  I       +  
Sbjct: 191 FRKVRFPAALPQVFVGLKVAMPL------AAIGAVIGEFYSDQPGLGYQILQYNGVGETA 244

Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
               A++ +  +         L+ R  + W
Sbjct: 245 TAWAAIVLIAAMSIGLYSALYLVERLALPW 274


>gi|329923010|ref|ZP_08278526.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Paenibacillus sp. HGF5]
 gi|328941783|gb|EGG38068.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Paenibacillus sp. HGF5]
          Length = 233

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 77/206 (37%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+ +   L +Y  +    ++  + ++ +       L +KS+    +++ I +I+Q +P L
Sbjct: 15  ISRNQELLWEYFIQHITMVVIGLGLAFIVGVPLGILCSKSKWAAKIILFITNILQVVPSL 74

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +++        ++G        +F   +  +  + Y  L  +     E  +   
Sbjct: 75  AMLVVLMLWMGLGTTTVMVG--------LFLYSLNPIARNTYVGLKQVDPSYLESGKGIG 126

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  Q    +  P ++  ++  + ++       V  + ++  G       G+G  I   +
Sbjct: 127 MSPLQMLVKVRFPLALTYIMSGLRIAAVIAIGVVTIAPLVGGG-------GLGREIYAGL 179

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              + L I    +    +  + D +L
Sbjct: 180 NSNNSLRIFAGAIPAAVLAIVADIVL 205



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 13/197 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV+ + +A I+ +P+GI        +  I     +L   P+     +++  +        
Sbjct: 33  VVIGLGLAFIVGVPLGILCSKSKWAAKIILFITNILQVVPSLAMLVVLMLWMGLGTTTVM 92

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L       +   I  N   G       + E      ++  +    +  P    Y ++G
Sbjct: 93  VGL----FLYSLNPIARNTYVGLKQVDPSYLESGKGIGMSPLQMLVKVRFPLALTYIMSG 148

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   A     ++ +   G       GLG  I       +   +  G +      +  
Sbjct: 149 LRIAAVIAIGVVTIAPLVGGG-------GLGREIYAGLNSNNSLRIFAGAIPAAVLAIVA 201

Query: 570 NRFL--WHPLYLYGTRC 584
           +  L           R 
Sbjct: 202 DIVLGMLQRKMDLAKRK 218


>gi|261408314|ref|YP_003244555.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284777|gb|ACX66748.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 233

 Score = 95.4 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+ +   L +Y  +    ++  + ++ +       L +KS+    V++ I +I+Q +P L
Sbjct: 15  ISRNQELLWEYFIQHITMVVIGLGLAFIVGVPLGILCSKSKWAAKVILFITNILQVVPSL 74

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +++        ++G        +F   +  +  + Y  L  +     E  +   
Sbjct: 75  AMLVVLMLWMGLGTTTVMVG--------LFLYSLNPIARNTYVGLKQVDPSYLESGKGIG 126

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S +Q    +  P ++  ++  + ++       V  + ++  G       G+G  I   +
Sbjct: 127 MSPFQMLVKVRFPLALTYIMSGLRIAAVIAIGVVTIAPLVGGG-------GLGREIYAGL 179

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              + L I    +    +  + D +L
Sbjct: 180 NSNNSLRIFAGAIPAAVLAIVADIVL 205



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 13/197 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV+ + +A I+ +P+GI        +  I     +L   P+     +++  +        
Sbjct: 33  VVIGLGLAFIVGVPLGILCSKSKWAAKVILFITNILQVVPSLAMLVVLMLWMGLGTTTVM 92

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L       +   I  N   G       + E      ++ ++    +  P    Y ++G
Sbjct: 93  VGL----FLYSLNPIARNTYVGLKQVDPSYLESGKGIGMSPFQMLVKVRFPLALTYIMSG 148

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   A     ++ +   G       GLG  I       +   +  G +      +  
Sbjct: 149 LRIAAVIAIGVVTIAPLVGGG-------GLGREIYAGLNSNNSLRIFAGAIPAAVLAIVA 201

Query: 570 NRFL--WHPLYLYGTRC 584
           +  L           R 
Sbjct: 202 DIVLGMLQRKMDLAKRK 218


>gi|134293507|ref|YP_001117243.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134136664|gb|ABO57778.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 362

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 79/256 (30%), Gaps = 17/256 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVC--GVAIGIAWQSIGYIVNH-----FTYQDVLY 378
             P    QL   +     L      +          AW    +             D   
Sbjct: 101 RVPATRAQLARVRPAGPWLVALPLVLAAWEVATAKTAWLPTPFFAPPQALIEVYVDDWPR 160

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+  + +       +   VG+ IG+   I   + P  ++L   PA    PL  
Sbjct: 161 LAGSAANTLKLLSIGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTF 220

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 +       + L+   T + +     +G ++    + +VA +           + 
Sbjct: 221 YFFPTSYS----AAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLRVA 276

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P+   G       ++   +V+E+          +GLG Y++ +    S+  +   
Sbjct: 277 IPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQGWASYVNMYAA 330

Query: 559 VLIMCCFVLALNRFLW 574
           +++M      L   L+
Sbjct: 331 LIVMALLFSGLIALLF 346



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    +          P        I +   D   L   A+ T  
Sbjct: 111 RVRPAGPWLVALPLVLAAWEVATAKTAWLPTPFFAPPQALIEVYVDDWPRLAGSAANTLK 170

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 171 LLSIGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 223

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  +  + +    +  + ++ R   +V+R+   +       + +P ++P
Sbjct: 224 -PTSYSAAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLRVAIPAALP 282

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 283 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 336

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 337 LFSGLIALLF 346


>gi|317053495|ref|YP_004118629.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952600|gb|ADU72073.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 248

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            Y D   +      T+  V + + I+ +  +  G+ +G        I P A    A P  
Sbjct: 46  GYTDFAELSGHLTTTLGEVALALSISCLTGVVAGLLVGISVTARPIILPMASSAYAIPIV 105

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           + +P++ + +     +      +   F   +    +V AG  + P+ +     S   +  
Sbjct: 106 ILYPIITAWLGVGAESK----IIFGGFYGFFPAFLSVAAGVHSIPSAYVLTGRSLGASRL 161

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               Y+++P   P  + G       A    IV E+ +       ++GLG YI+ +     
Sbjct: 162 SLAWYVLVPAALPTILGGIRLGGALAIVGVIVGEMLT------SSSGLGYYISYNRTMMD 215

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
            P+V  G++++    L  + F+
Sbjct: 216 TPKVYSGIILVILLTLVFDSFI 237



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 17/246 (6%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRML 73
           P  F  +  V+++  I  LL           P     ++    D   L  + + T   + 
Sbjct: 6   PARFVQILLVIILASIWELLPRAGLVPPIFLPSLSATLIAGYTDFAELSGHLTTTLGEVA 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ IS L   V   L   S     +++P+     +IPI+        +       K+I 
Sbjct: 66  LALSISCLTGVVAGLLVGISVTARPIILPMASSAYAIPIVILYPIITAWLGVGAESKIIF 125

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                 F  F         S+   + +IP       RS   S     WY+ VP ++P ++
Sbjct: 126 GGFYGFFPAF--------LSVAAGVHSIPSAYVLTGRSLGASRLSLAWYVLVPAALPTIL 177

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +  +     V+  EM+          G+G YI+      D   +   ++ ++ +  
Sbjct: 178 GGIRLGGALAIVGVIVGEMLTSSS------GLGYYISYNRTMMDTPKVYSGIILVILLTL 231

Query: 254 LYDQLL 259
           ++D  +
Sbjct: 232 VFDSFI 237


>gi|160878279|ref|YP_001557247.1| substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium phytofermentans ISDg]
 gi|160426945|gb|ABX40508.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Clostridium phytofermentans ISDg]
          Length = 523

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 77/193 (39%), Gaps = 15/193 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           IT +   + +           ++  ++L       L + ++R+   ++ + +I+Q+IP +
Sbjct: 7   ITNNYEQILRLLLEHIKLTAISVGFAILIGVPLGILISYAKRVSKPILMVANIIQAIPSM 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F + +             + AI A+    +  +  + Y  + NI     E ++   
Sbjct: 67  ALLGFMIPFLGIGM--------VPAIVAVILYSLLPIIKNTYTGIDNINPQTLEAAKGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L+ +Q    + +P ++P ++  + ++       V A  ++ +    I   G+G  +   I
Sbjct: 119 LTPFQVLTKVQIPLALPVIMAGVRIA------SVTAVGLMTMAAF-IGAGGLGHLVFSGI 171

Query: 234 KEQDLLAILYAML 246
           +  +   IL   +
Sbjct: 172 RTVNNNQILAGAI 184



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    +    + +  A +I +P+GI I +   +S  I   A ++ A P+      +
Sbjct: 13  QILRLLLEHIKLTAISVGFAILIGVPLGILISYAKRVSKPILMVANIIQAIPSMALLGFM 72

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +   + +I  +   I+ N   G         E A    +T ++    +
Sbjct: 73  IPFLGIG----MVPAIVAVILYSLLPIIKNTYTGIDNINPQTLEAAKGIGLTPFQVLTKV 128

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   A   A     ++     G       GLG  +       +  +++ 
Sbjct: 129 QIPLALPVIMAGVRIASVTAVGLMTMAAFIGAG-------GLGHLVFSGIRTVNNNQILA 181

Query: 558 GVL 560
           G +
Sbjct: 182 GAI 184


>gi|164687917|ref|ZP_02211945.1| hypothetical protein CLOBAR_01562 [Clostridium bartlettii DSM
           16795]
 gi|164602330|gb|EDQ95795.1| hypothetical protein CLOBAR_01562 [Clostridium bartlettii DSM
           16795]
          Length = 529

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   +  + +   ++  ++I+Q++P + FL   V                 AIF +
Sbjct: 33  GIPLGIFISHYKSIRKYILGFINIVQAVPSMAFLGLLVPVLGIG--------STPAIFMV 84

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +    +  I   + E +    L+  Q  + + +P ++P ++  + +S   
Sbjct: 85  VLYSLLPIVKNTSTGITGIDSGILESATGIGLTPRQILFKIQLPLALPVIMAGVRIS--- 141

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V++  ++     +   G+G  +   ++  +   IL   +    +    D + 
Sbjct: 142 ----AVSAVGLMTLSAFVGAGGLGYLVFSGVQTVNNTMILAGAIPACILALCVDFIF 194



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            IP+GI+I     I   I  F  ++ A P+  F  L+V  +       +     +++  +
Sbjct: 33  GIPLGIFISHYKSIRKYILGFINIVQAVPSMAFLGLLVPVLGIG----STPAIFMVVLYS 88

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N   G +   +   E A+   +T  +    I LP   P  + G   +   A   
Sbjct: 89  LLPIVKNTSTGITGIDSGILESATGIGLTPRQILFKIQLPLALPVIMAGVRISAVSAVGL 148

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
             +S     G       GLG  +    +  +   ++ G +  C   L ++ F++  +   
Sbjct: 149 MTLSAFVGAG-------GLGYLVFSGVQTVNNTMILAGAIPACILALCVD-FIFSKVETL 200

Query: 581 G 581
            
Sbjct: 201 A 201


>gi|110635868|ref|YP_676076.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286852|gb|ABG64911.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 258

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   +IA++I I +G  +G    + +      ++L   P     P+ +    +  
Sbjct: 60  TIGAALGSWVIAAMIGIVLGAALGLSKSLRTYTMTSIEVLRPLPPVALIPVALLMFGFSL 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++     W IL   + G  +     +EVA S  +        I++P   P 
Sbjct: 120 KTE----LFVIAIPAIWPILVGTMGGVLSTSTRLREVARSLKLHRSEILFKILIPAAAPS 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   +   +   +IV E+           GLG  +    +  +   +   ++++   
Sbjct: 176 VLVGCRLSMSLSLVLAIVVEMIGNPE------GLGYAVVREAQALNPNLMFAYIILIGLL 229

Query: 566 VLALNRFL 573
            +  N FL
Sbjct: 230 GVLFNHFL 237



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 87/240 (36%), Gaps = 15/240 (6%)

Query: 21  DLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            LL FVL    +I   +   Q    P  I       +   ++      T    L + VI+
Sbjct: 12  GLLVFVLAWEFLIQSGMIRFQYLPPPSAIAIAFNELIATPTMYAEMMHTIGAALGSWVIA 71

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +   V       S+ L    +  +++++ +P +  +   ++ F          +    +
Sbjct: 72  AMIGIVLGAALGLSKSLRTYTMTSIEVLRPLPPVALIPVALLMFG--------FSLKTEL 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F I    +W +       + +    L EV+RS +L   +  + + +P + P ++    +S
Sbjct: 124 FVIAIPAIWPILVGTMGGVLSTSTRLREVARSLKLHRSEILFKILIPAAAPSVLVGCRLS 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           MS      +  EMI          G+G  +    +  +   +   ++ +  +  L++  L
Sbjct: 184 MSLSLVLAIVVEMIG------NPEGLGYAVVREAQALNPNLMFAYIILIGLLGVLFNHFL 237


>gi|327481665|gb|AEA84975.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           stutzeri DSM 4166]
          Length = 253

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++D     L    LP++   T  R+L A  +++    +      +SR    +L 
Sbjct: 31  LPTPAAVLDTFWQALQSGELPEHLLVTLRRVLIAFALAMALGTLLGVWMGRSRLANALLD 90

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L +  ++P L  +    V+F  +          AA+ A+  ++V N+  ++ +   ++
Sbjct: 91  PLLVLFLNLPALVTIILLYVWFGLVE--------AAAVLAVVVNKVPNVAVTVREGARSL 142

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              LE+++R +    WQ+  ++ +P   P L+      ++  W  V+  E++        
Sbjct: 143 DPKLEQMARVYGFGRWQRIAHVWLPQLFPYLMAATRGGLALIWKIVLVVELLG------R 196

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  + +A +  D+ +IL   L  + V+ L +  L +P+   ++ +R
Sbjct: 197 SDGIGFQLHMAFQVFDVASILAYSLAFIAVVQLIELALLQPLERRASAWR 246



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV++   +A  +   +G+W+G     ++ + P   L    PA V   L+      
Sbjct: 55  LVTLRRVLIAFALAMALGTLLGVWMGRSRLANALLDPLLVLFLNLPALVTIILLYVWFGL 114

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L + +         +   V  GA +     +++A  +    W+   ++ LP +F
Sbjct: 115 VEAAAVLAVVV----NKVPNVAVTVREGARSLDPKLEQMARVYGFGRWQRIAHVWLPQLF 170

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY +          W   +V E+        R+ G+G  +  + +      ++   L   
Sbjct: 171 PYLMAATRGGLALIWKIVLVVELLG------RSDGIGFQLHMAFQVFDVASILAYSLAFI 224

Query: 564 CFVLALNRFLWHPLYLYG 581
             V  +   L  PL    
Sbjct: 225 AVVQLIELALLQPLERRA 242


>gi|146337803|ref|YP_001202851.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146190609|emb|CAL74611.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 256

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 348 WFCVVCGVAIGIAWQS---------------IGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           W  V+  VA+   WQ                +G +   +   +   +      ++ R++ 
Sbjct: 15  WAGVLAIVAVLGLWQLIGSLALINPLFLPTPLGILRALYRLAESGALWQHLSASLLRILS 74

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              + +   I VG  IG      S    F   L   P     PL++  +           
Sbjct: 75  GWALGTASGIVVGFAIGLWRVARSVGITFVSALFPIPKIAVLPLLILWLGIG----EQPK 130

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +  G  +    +V +G  A P +   +A SF +      R +I PG  P  + G   
Sbjct: 131 IATIALGVFFSTTISVYSGVDAVPRNLIRMAQSFGVPFPTIVRKVIWPGALPSILAGFRI 190

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               A    + +E+          TG+G ++ ++       +++ G+L++  F LA+ + 
Sbjct: 191 TASVALMLVVSAEMIG------AETGIGTFVLQAGNLMQTDQLMAGILMLSLFGLAVGKL 244

Query: 573 L 573
           +
Sbjct: 245 I 245



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 96/252 (38%), Gaps = 15/252 (5%)

Query: 16  FPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  +  ++A + +  +I ++ L        P  I+  +    +  +L Q+ S + LR+LS
Sbjct: 15  WAGVLAIVAVLGLWQLIGSLALINPLFLPTPLGILRALYRLAESGALWQHLSASLLRILS 74

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              +      V        R    V +  +  +  IP +  L   +++            
Sbjct: 75  GWALGTASGIVVGFAIGLWRVARSVGITFVSALFPIPKIAVLPLLILWLGIG-------- 126

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   I  I     ++ T S+Y  +  +PR+L  +++SF +        +  P ++P ++ 
Sbjct: 127 EQPKIATIALGVFFSTTISVYSGVDAVPRNLIRMAQSFGVPFPTIVRKVIWPGALPSILA 186

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              ++ S     VV++EMI          GIG+++  A        ++  +L +      
Sbjct: 187 GFRITASVALMLVVSAEMIGAET------GIGTFVLQAGNLMQTDQLMAGILMLSLFGLA 240

Query: 255 YDQLLFRPMIVW 266
             +L+      W
Sbjct: 241 VGKLISLLEARW 252


>gi|161521108|ref|YP_001584535.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189352714|ref|YP_001948341.1| ABC nitrate/sulfonate/bicarbonate family transporter inner membrane
           subunit [Burkholderia multivorans ATCC 17616]
 gi|160345158|gb|ABX18243.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189336736|dbj|BAG45805.1| ABC nitrate/sulfonate/bicarbonate family transporter inner membrane
           subunit [Burkholderia multivorans ATCC 17616]
          Length = 274

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 13/217 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++      +   +L +  S +  R      I      +       SR    V+ 
Sbjct: 54  LVSPADVLRTAWTQIASGALARALSASLAREACGFAIGATGGLLLGAALGLSRVATRVVG 113

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  D  + I +  ++    V+F      KV+   LAA+  +               +  +
Sbjct: 114 PSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALLPVAAHTC--------DGIHAV 165

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR   +V+R+ R S  Q   ++ VP ++P +   + + +   W   + +E ++V  +   
Sbjct: 166 PRAYVDVARALRYSRLQLVRHVIVPAALPSIFTGLYLGLIYSWLATLGAEYLLVAGS--- 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             GIG+ +    ++  +  +L+ ++ +    +  + L
Sbjct: 223 --GIGNTLIDGSEQFRMDLVLFGIIVVGATGWALNAL 257



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 76/215 (35%), Gaps = 9/215 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+       +   +T      +      ++ R      I +   + +G  +G     +  
Sbjct: 52  GLLVSPADVLRTAWTQIASGALARALSASLAREACGFAIGATGGLLLGAALGLSRVATRV 111

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P            + PL+        +   ++LS          +  +   G  A P 
Sbjct: 112 VGPSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLS----LAALLPVAAHTCDGIHAVPR 167

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            + +VA +   +  +  R++I+P   P   TG       +W A++ +E        +  +
Sbjct: 168 AYVDVARALRYSRLQLVRHVIVPAALPSIFTGLYLGLIYSWLATLGAEYLL-----VAGS 222

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           G+G  + + +E+     V+ G++++     ALN  
Sbjct: 223 GIGNTLIDGSEQFRMDLVLFGIIVVGATGWALNAL 257


>gi|332529819|ref|ZP_08405773.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332040840|gb|EGI77212.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 256

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 82/245 (33%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              ++  +   +   + IFW  +   + +          +   T +    +      T +
Sbjct: 4   RKAVERWAPLLLLAFIVIFWQIICSALNVSEFIFPSPLRIWEQTLEHKATIAAHAWRTFW 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    IA ++ + +G  IG      + + P      A P   F P++V       + P
Sbjct: 64  VTMAGFGIAIVVGVLLGFLIGSSRLAYAAVYPLMTAFNALPKAAFVPVLVVWFGIG-IGP 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  + L+   + + I+ N+  G +    + ++V        W     + LP   PY+  
Sbjct: 123 AILTAFLI---SFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSLPYFFG 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  + VSE+           G+G  +  +           G+L++    + 
Sbjct: 180 SLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSAMKMGLAFSGLLVVGAMAML 233

Query: 569 LNRFL 573
           +    
Sbjct: 234 MYELF 238



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 94/251 (37%), Gaps = 17/251 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LLAF+++   I      + E   P  +           ++  +A RT    ++   I+++
Sbjct: 15  LLAFIVIFWQIICSALNVSEFIFPSPLRIWEQTLEHKATIAAHAWRTFWVTMAGFGIAIV 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L   SR     + P++    ++P   F+   VV+F              AI  
Sbjct: 75  VGVLLGFLIGSSRLAYAAVYPLMTAFNALPKAAFVPVLVVWFGIGIGP--------AILT 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  ++   L  +  +LE+V R      W     +G+P S+P    ++ ++++
Sbjct: 127 AFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSLPYFFGSLKVAIT 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +     SEM    +      GIG  +  A     +      +L +  +  L  +L   
Sbjct: 187 LAFVGTTVSEMTAANE------GIGYLLISAGSAMKMGLAFSGLLVVGAMAMLMYELFSF 240

Query: 259 LFRPMIVWSNK 269
           + +    W+++
Sbjct: 241 IEKHTTAWAHR 251


>gi|330467232|ref|YP_004404975.1| putative ABC transporter permease [Verrucosispora maris AB-18-032]
 gi|328810203|gb|AEB44375.1| putative ABC transporter permease protein [Verrucosispora maris
           AB-18-032]
          Length = 288

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R+++  II     + +G+ +G        I+P    + A P   +F L +     
Sbjct: 95  GVSLRRILIGSIIGIAGGVLLGVVMGTVSGFRVVIEPVVTFVRALPPLAYFSLFIIWFGI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   LS+         +     A   + P    E A +         R ++LP   
Sbjct: 155 DETPKLWLLSI----AALPPVAVATAAAVHSAPTGLVEAARALGAGRVHVIRDVVLPHAL 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A G A+++ + +E  +         G+G  + ++        V+LG+  + 
Sbjct: 211 PEIFTGIRIAVGVAYSSVVAAETING------VPGIGGMVRDAQRYSQTDVVILGLFAIG 264

Query: 564 CFVLALNRFL 573
              L ++  L
Sbjct: 265 LSGLIIDALL 274



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 84/209 (40%), Gaps = 17/209 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   +  R+L   +I +    +   +        +V+ P++  ++++P L + +  +
Sbjct: 90  LIEHLGVSLRRILIGSIIGIAGGVLLGVVMGTVSGFRVVIEPVVTFVRALPPLAYFSLFI 149

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      K+        + +  + +  +  +   ++ + P  L E +R+         
Sbjct: 150 IWFGIDETPKL--------WLLSIAALPPVAVATAAAVHSAPTGLVEAARALGAGRVHVI 201

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P +   + +++   +  VVA+E I        +PGIG  +  A +      
Sbjct: 202 RDVVLPHALPEIFTGIRIAVGVAYSSVVAAETI------NGVPGIGGMVRDAQRYSQTDV 255

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           ++  +  +     + D LL      +I W
Sbjct: 256 VILGLFAIGLSGLIIDALLRTAENRLIPW 284


>gi|237747877|ref|ZP_04578357.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Oxalobacter formigenes OXCC13]
 gi|229379239|gb|EEO29330.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Oxalobacter formigenes OXCC13]
          Length = 250

 Score = 95.4 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 81/197 (41%), Gaps = 10/197 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV++  ++++I+   +G+  G    ++   +P   +L    + ++    +     
Sbjct: 57  AVTVRRVLLGFVLSAIVGTVIGVVFGASRRLAVFFEPVISVLNTVSSAIWAVFAIIWFGI 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++       IL N+          + E+A SF +  ++  R I +P I 
Sbjct: 117 SDAS----TVTVVFMTAMPLILTNIWDATRTVDRQYVELARSFRMNTFQIVRKIYIPTIL 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P + + +  A G  W  S+V+E    G      +G+G  +  + +     +V    +++ 
Sbjct: 173 PAFFSASRLAFGFGWRVSLVAETIGAG------SGIGYRLRLAADMVQSAQVFAWTVLLI 226

Query: 564 CFVLALNRFLWHPLYLY 580
            F++ +   +  P+  +
Sbjct: 227 VFMVLIESGVIKPVEKW 243



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 103/251 (41%), Gaps = 14/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L A VL I  ++           P  + D     +   +     + T  R+L   V+S +
Sbjct: 13  LAAIVLAIWELSSRQLQAFVLPGPLAVFDAFVSLVKTDTFWTDVAVTVRRVLLGFVLSAI 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +   SRRL +   P++ ++ ++    +  F +++F          ++ + +  
Sbjct: 73  VGTVIGVVFGASRRLAVFFEPVISVLNTVSSAIWAVFAIIWFGI--------SDASTVTV 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F + +  +  +++ +   + R   E++RSFR++ +Q    + +P  +P       ++  
Sbjct: 125 VFMTAMPLILTNIWDATRTVDRQYVELARSFRMNTFQIVRKIYIPTILPAFFSASRLAFG 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GW   + +E I  G       GIG  + LA        +    + ++  + L +  + +
Sbjct: 185 FGWRVSLVAETIGAGS------GIGYRLRLAADMVQSAQVFAWTVLLIVFMVLIESGVIK 238

Query: 262 PMIVWSNKFRL 272
           P+  W  +++L
Sbjct: 239 PVEKWLFRWKL 249


>gi|290968621|ref|ZP_06560159.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781274|gb|EFD93864.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 208

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 67/173 (38%), Gaps = 10/173 (5%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +PVG+  G     ++ + PF  L  + P  +F PL++  +       N     L+    
Sbjct: 35  AVPVGLLAGRTRRGNAILSPFLYLFYSLPKIIFLPLILMAMGLG----NAPKIFLISCTV 90

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            ++I   +   A A       +  S   T  + +R+++ P   P  +T   T  G A   
Sbjct: 91  FFHIAIVIRDAARAIDPMQVAILRSLGATPGQTFRHLLWPACLPAILTALRTGLGIALAL 150

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++E  +        +GLG +I  + E  ++ ++   ++ +    +     L
Sbjct: 151 LFITETFA------SYSGLGYFIMNAMETRNYEDMYAAIITLGLLGIGFYILL 197



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L ++   +  R+L  +  +LL       LA ++RR   +L P L +  S+P + FL  
Sbjct: 11  QELLRHIQASCGRLLLGLCGALLPAVPVGLLAGRTRRGNAILSPFLYLFYSLPKIIFLPL 70

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++        K        IF I  +  +++   +  +   I      + RS   +  Q
Sbjct: 71  ILMAMGLGNAPK--------IFLISCTVFFHIAIVIRDAARAIDPMQVAILRSLGATPGQ 122

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F +L  P  +P ++  +   +      +  +E            G+G +I  A++ ++ 
Sbjct: 123 TFRHLLWPACLPAILTALRTGLGIALALLFITETFA------SYSGLGYFIMNAMETRNY 176

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             +  A++T+  +   +  LL R
Sbjct: 177 EDMYAAIITLGLLGIGFYILLDR 199


>gi|315501383|ref|YP_004080270.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|315408002|gb|ADU06119.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 276

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--------- 378
           P   ++     R + +       V+   A  +    +  +                    
Sbjct: 13  PRPAVRRGMAVRPAAVGLPALGLVIAVAAWWLVTSGLNLVHPAALPPPQAVGKSLAGTTE 72

Query: 379 -VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT +  V   +++S   + +G+ +     +     P    + A P   F PL+
Sbjct: 73  VLLPALGITTWMTVFGFLLSSAAGVLIGMALAASRRVERMFAPLLVAVNAVPKIAFGPLL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  V +        +  ++     + I+ +   G +  P D  E+  S + + W+ +R +
Sbjct: 133 VVAVGWGQK----PILTMVFLLCFFPIVLSTATGLTTTPADLAELGRSLNASWWQSFRKV 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   P    G   A   A   +++ E       +    GLG  I +    G       
Sbjct: 189 RFPAALPQIFVGLKVAMPLAAIGAVIGEF------YSDRPGLGYQILQYNGVGDTATAWA 242

Query: 558 GVLIMCCFVLAL 569
            ++++    + L
Sbjct: 243 AIVLVALMSIVL 254



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 92/260 (35%), Gaps = 22/260 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHS----LPQYASRTT 69
           + P    L A  LVI +    L+        P  +     +   +      L      TT
Sbjct: 23  VRPAAVGLPALGLVIAVAAWWLVTSGLNLVHPAALPPPQAVGKSLAGTTEVLLPALGITT 82

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
              +   ++S     +     A SRR+  +  P+L  + ++P + F    VV        
Sbjct: 83  WMTVFGFLLSSAAGVLIGMALAASRRVERMFAPLLVAVNAVPKIAFGPLLVVAVGWG--- 139

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                +   +  +F    + +  S    L   P DL E+ RS   S WQ F  +  P ++
Sbjct: 140 -----QKPILTMVFLLCFFPIVLSTATGLTTTPADLAELGRSLNASWWQSFRKVRFPAAL 194

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--- 246
           P +   + ++M        A+   V+G+     PG+G  I       D      A++   
Sbjct: 195 PQIFVGLKVAMPL------AAIGAVIGEFYSDRPGLGYQILQYNGVGDTATAWAAIVLVA 248

Query: 247 TMLGVIFLYDQLLFRPMIVW 266
            M  V++    L+ R  + W
Sbjct: 249 LMSIVLYAVLSLVERLALPW 268


>gi|313117408|ref|YP_004044391.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
 gi|312294299|gb|ADQ68730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 281

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 83/252 (32%), Gaps = 12/252 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           LG I          L +       L      V+  +   +   +   +       ++   
Sbjct: 26  LGAIGLTSFLAVWWLAAALVEPTYLLPGPLPVLSALVTEVTTTAPLSLPVTGGTVELPRA 85

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +     T   +V  ++  + +    G+ IG+     +   P  ++L   P   +    + 
Sbjct: 86  MTRLAQTSLHLVPGLLAGAFVGNGAGLVIGYATRADAIATPVVRVLRPIPELAWIAFAIV 145

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYII 498
                H       + ++  G  W   +   +G     + +KEVA+S  I       RY+I
Sbjct: 146 WFGIGHTG----ATFIVAIGALWINYYAAYSGVRGVRDGYKEVAASLGIRTHVGMLRYVI 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  V G  T+ G      + +E+           G+G  I  ++        +  
Sbjct: 202 LPAASPAIVNGFRTSIGRCLMIVVGAELFG-------APGVGYEILNASNNLDMARSMAY 254

Query: 559 VLIMCCFVLALN 570
           +L++    + ++
Sbjct: 255 MLLISAVYICVD 266



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 96/253 (37%), Gaps = 31/253 (12%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIV------------PITLDVHSLPQYASR 67
             L +F+ V  +   L+        P  ++  +            P+T     LP+  +R
Sbjct: 29  IGLTSFLAVWWLAAALVEPTYLLPGPLPVLSALVTEVTTTAPLSLPVTGGTVELPRAMTR 88

Query: 68  ---TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T+L ++  ++           +   + R   +  P++ +++ IP L ++ F +V+F 
Sbjct: 89  LAQTSLHLVPGLLAGAFVGNGAGLVIGYATRADAIATPVVRVLRPIPELAWIAFAIVWFG 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYL 183
             + G        A F +    +W   ++ Y  +  +    +EV+ S  + +      Y+
Sbjct: 149 IGHTG--------ATFIVAIGALWINYYAAYSGVRGVRDGYKEVAASLGIRTHVGMLRYV 200

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P +V     S+           MIVVG  +   PG+G  I  A    D+   + 
Sbjct: 201 ILPAASPAIVNGFRTSIGR-------CLMIVVGAELFGAPGVGYEILNASNNLDMARSMA 253

Query: 244 AMLTMLGVIFLYD 256
            ML +  V    D
Sbjct: 254 YMLLISAVYICVD 266


>gi|331265817|ref|YP_004325447.1| ABC transporter membrane-spanning permease (glycine
           betaine/carnitine/choline transport system permease,
           putative [Streptococcus oralis Uo5]
 gi|326682489|emb|CBZ00106.1| ABC transporter membrane-spanning permease (glycine
           betaine/carnitine/choline transport system permease,
           putative [Streptococcus oralis Uo5]
          Length = 506

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKMADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFLL 198



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       ++   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKMADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|221196548|ref|ZP_03569595.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221203217|ref|ZP_03576236.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221177151|gb|EEE09579.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221183102|gb|EEE15502.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 363

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 86/266 (32%), Gaps = 10/266 (3%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L      L   +  +R      +        +  +L  +         +   + +    +
Sbjct: 92  LLFVAATLGPLVPAVRAPLARVYAAGPWLVALPLVLAAWEIATAKTGWLPTPFFAPPQAL 151

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 D   +      T+  + +       +   VG+ IG+   I   + P  ++L   
Sbjct: 152 IEVYVDDWPRLAGSAVNTLKLLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPV 211

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PL        +       + L+   T + +     +G ++    + +VA +F  
Sbjct: 212 PATALLPLTFYFFPTSYS----AAAFLIALATGFPVAVLTWSGIASVNRQYYDVARTFGA 267

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +       + +P   P+   G       ++   +V+E+          +GLG Y++ +  
Sbjct: 268 SARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQG 321

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLW 574
             S+  +   +++M      L   L+
Sbjct: 322 WASYVNMYAALIVMALLFSGLIALLF 347



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  LV+    I          P        I +   D   L   A  T   +      
Sbjct: 120 LVALPLVLAAWEIATAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAVNTLKLLALGFAY 179

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F        SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 180 GVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PTSYSAA 231

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  + ++ R   +V+R+F  S       + +P ++P +   + M
Sbjct: 232 AFLIALATGFPVAVLTWSGIASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFM 291

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 292 GLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLIAL 345

Query: 259 LF 260
           LF
Sbjct: 346 LF 347


>gi|126432707|ref|YP_001068398.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|126232507|gb|ABN95907.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 286

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L+ +VI +    +   +      +  VL P L  ++++P L +    V
Sbjct: 88  LVEHLYMTLRRVLAGVVIGVALGVLLGLVMGSVSWVRSVLEPWLTFLRALPPLAYFFLLV 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S  +  
Sbjct: 148 IWLGIDEAPKITLLALAALPPAAVATTAAVLAAPVG--------LTEAARALGASRGEVI 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P     + +++   +  VVA+E+         LPG+G  +  A    +   
Sbjct: 200 RDVVVPSALPETFTGIRLAVGMAYSSVVAAELF------NGLPGVGGLVKDASNYNNTPV 253

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  +  +     + D LL    R    W  K
Sbjct: 254 VLVGIFAIGISGLIIDGLLRTIERRSTPWIGK 285



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV+  ++I   + + +G+ +G    + S ++P+   L A P   +F L+V  +  
Sbjct: 93  YMTLRRVLAGVVIGVALGVLLGLVMGSVSWVRSVLEPWLTFLRALPPLAYFFLLVIWLGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L+L  +            A   A P    E A +   +     R +++P   
Sbjct: 153 DEAPKITLLALAALPPAA----VATTAAVLAAPVGLTEAARALGASRGEVIRDVVVPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A G A+++ + +E+ +         G+G  + +++   + P V++G+  + 
Sbjct: 209 PETFTGIRLAVGMAYSSVVAAELFNG------LPGVGGLVKDASNYNNTPVVLVGIFAIG 262

Query: 564 CFVLALNRFL 573
              L ++  L
Sbjct: 263 ISGLIIDGLL 272


>gi|2808669|emb|CAA11380.1| abcB [Paracoccus denitrificans PD1222]
          Length = 267

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 112/266 (42%), Gaps = 14/266 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           PP +   + P +  +LA +LV  + + L    Q    P ++   +        L   A  
Sbjct: 14  PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 73

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++++  +++           +SR     L P L I+ ++P L  +    ++     
Sbjct: 74  TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 132

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E AAI A+  +++  +T  + +    +  DL++++R+FR+  W +  ++ +P 
Sbjct: 133 -------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLPQ 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P +  +    +S  W  V+  E +   +      G+G  I L     D+  +L   L 
Sbjct: 186 LAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWALA 239

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLE 273
            + V+   D +L RP    +N+++ +
Sbjct: 240 FVAVMLAIDLILLRPWESRANRWKQD 265



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   +T+FRVV    +A    + +G+W+G        + P   +L   PA V   L
Sbjct: 65  GELWFNAGMTLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVL 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +            L +       +   +  G  A   D  ++A +F +  W   R+
Sbjct: 125 CYIWIGL----NETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRH 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P+    A       W   +V E         R+ G+G  I           V+
Sbjct: 181 VVLPQLAPHVAASARAGISLIWKIVLVVEFLG------RSNGVGFKIHLLFSSFDVEGVL 234

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
              L     +LA++  L  P      R
Sbjct: 235 AWALAFVAVMLAIDLILLRPWESRANR 261


>gi|312898162|ref|ZP_07757553.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Megasphaera micronuciformis
           F0359]
 gi|310620659|gb|EFQ04228.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Megasphaera micronuciformis
           F0359]
          Length = 501

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 21/190 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +S++ +++L  F      ++  R+  V+  +  IMQ++P L  L   +  F         
Sbjct: 27  VSSLCLAILIAFPLGLFISRKPRMAAVITQLTGIMQTLPSLAILGLMIPLFGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+ A+    ++ +  +    +  I   L+E   +  ++ + K     +P +MP +
Sbjct: 81  --PIPALVALVIYALFPILQNTVTGINEIDPSLQEAGEALGMNRFVKLKTYEIPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +  +            A+ MI+   T   +I   G+GS+I L I   D   I+       
Sbjct: 139 MSGVR----------TAAVMIIGTATLAALIGAGGLGSFILLGIDRHDSSLIIIGAFASA 188

Query: 250 GVIFLYDQLL 259
            +   +   L
Sbjct: 189 LLAIAFSSFL 198



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 77/194 (39%), Gaps = 16/194 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  + +A +I  P+G++I  +P +++ I     ++   P+     ++   +  + + P  
Sbjct: 27  VSSLCLAILIAFPLGLFISRKPRMAAVITQLTGIMQTLPSLA---ILGLMIPLFGIGPIP 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L  L+I+   + IL N + G +      +E   +  +  +   +   +P   P  ++G 
Sbjct: 84  ALVALVIY-ALFPILQNTVTGINEIDPSLQEAGEALGMNRFVKLKTYEIPLAMPVIMSGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG++I    ++     +++G        +A +
Sbjct: 143 RTAAVMIIGTATLAALIGAG-------GLGSFILLGIDRHDSSLIIIGAFASALLAIAFS 195

Query: 571 RFLWHPLYLYGTRC 584
            FL         R 
Sbjct: 196 SFL-----RLAERR 204


>gi|241113194|ref|YP_002973029.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861402|gb|ACS59068.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 282

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 77/199 (38%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +L+A  ++L         A     L   + P LD++Q++P   +L   
Sbjct: 86  GLWPETMSTLALVLTATALALAIGIPIGIAAGFFPALDRFMEPGLDLIQTLPPYIYLLPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +                 A+ A     V          +   P++  E+  +  ++  + 
Sbjct: 146 IALLGYG--------PATALIATVIVAVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKM 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +PF++P ++  +  S+   +  VV + ++  G       G+G  I  AI+  D+ 
Sbjct: 198 FFKIRLPFALPSIMAGINQSLMMAFGMVVTAGIVGSG-------GLGETIYGAIRTLDIA 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
             +   + ++ +  + D++
Sbjct: 251 TSINGAIAIVVLTMVLDRI 269



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 86/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L +  F +V  +   I W+ +       +   +     +G       T+  V+   
Sbjct: 43  ILWLLQLPPFYLVALIVALIGWRLVNVWFALLSGAALALCFSMGLWPETMSTLALVLTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A  I IP+GI  GF P +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 ALALAIGIPIGIAAGFFPALDRFMEPGLDLIQTLPPYIYLLPAIALLGYGPATALIATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 163 V----AVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   + + +   G       GLG  I  +         + G + +    + L+R 
Sbjct: 219 MMAFGMVVTAGIVGSG-------GLGETIYGAIRTLDIATSINGAIAIVVLTMVLDRI 269


>gi|288960311|ref|YP_003450651.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912619|dbj|BAI74107.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 246

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 91/234 (38%), Gaps = 14/234 (5%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G +    P  +   +    +  +L  +   T LR+L+A  +++           +S  + 
Sbjct: 21  GGRLLPGPLPVAQALLREAESGALLHHMGATLLRVLAAFALAMSVGVGLGLSMGRSVVMD 80

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +  P L    ++P L  +    V+F           E AAI A+  +++ N    +   
Sbjct: 81  RLFGPWLVFFLNLPALVVIVLAYVWFGL--------TEAAAIGAVAVNKIPNTVVLVRAG 132

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
              I   L E++R +RLS   +  ++ +P   P +       ++  W  V+  E++    
Sbjct: 133 ARAIDEGLIEMARVYRLSPTDRLRHVLLPQLTPTIAAAARSGLALIWKIVLVVELLG--- 189

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                 G+G  I L  +  D+  IL   +  + V+ L +  + +P      ++R
Sbjct: 190 ---RSDGVGFQINLLFQTFDVAGILAYSIAFVAVVQLLEYGVLQPAERRCQRWR 240



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 73/214 (34%), Gaps = 10/214 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   ++     T+ RV+    +A  + + +G+ +G    +     P+       PA V 
Sbjct: 39  AESGALLHHMGATLLRVLAAFALAMSVGVGLGLSMGRSVVMDRLFGPWLVFFLNLPALVV 98

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L               +++  I  T    +  V AGA A      E+A  + ++    
Sbjct: 99  IVLAYVWFGLTEAAAIGAVAVNKIPNT----VVLVRAGARAIDEGLIEMARVYRLSPTDR 154

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+++LP + P     A +     W   +V E+        R+ G+G  I    +     
Sbjct: 155 LRHVLLPQLTPTIAAAARSGLALIWKIVLVVELLG------RSDGVGFQINLLFQTFDVA 208

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            ++   +     V  L   +  P      R  R+
Sbjct: 209 GILAYSIAFVAVVQLLEYGVLQPAERRCQRWRRM 242


>gi|254463971|ref|ZP_05077382.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206684879|gb|EDZ45361.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 679

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 92/607 (15%), Positives = 197/607 (32%), Gaps = 85/607 (14%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            LVI     L   +    +    V  +   L     P+ +  T   +  ++ ++L+    
Sbjct: 86  PLVICATTALAWMLGGVRMALMAVVGLGFVLASGYWPE-SMNTLALVAVSVPLALIIGGG 144

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LA +  R+   +  +LDIMQ++P   +LT  +V F     G V+G   +AI+A    
Sbjct: 145 IGILANEYPRIRQPVQAVLDIMQTVPTFAYLTPLLVLFGF---GPVVGLIASAIYA---- 197

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  ++   L  +  +++E +     +  Q+ +   +P +   ++  +   +     
Sbjct: 198 -APPMARNVLLGLERVEPEIKEAAVMSGGTRLQQLFQCEIPSAGQQIMVGVNQCLMAALS 256

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---- 261
            V+ + +I   D       IG  + L +++      L A + ++    L D++       
Sbjct: 257 MVIIAAVIGGFDD------IGWEVLLTMRKAQFGQSLLAGMVIVIFAILIDRMSGTLTQD 310

Query: 262 ------PMIVW----------SNKFRLERTTGIYPADSWVLYLFRKT----------NFL 295
                 P + W          +  +   +  G +   + V     +              
Sbjct: 311 RRSKHDPRVAWGILALGVVVSAVFWSSVQQPGTHALFNPVADSVDRGLSAFTSANAEVLT 370

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
                  +    PL   + +            P   L L +    + ++      +  GV
Sbjct: 371 ALKNNVLFYVLLPLRIGLDQAVLPFTWGFSWTPVMSLALFAAGAAAAVVFALRGQLALGV 430

Query: 356 AIGIAWQSIGYIVNHFTYQ------------------DVLYVIWLG-----------CIT 386
            + IA   +   ++   +                    VL V+ LG            ++
Sbjct: 431 MLLIAAGMLETGISQLPWPFVLAGAGALAWVAGGRGLAVLTVVLLGTILVSGLWERALLS 490

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     +   +++   +G+     P +   ++P   +L   P  VF   V+        
Sbjct: 491 LYLSGAAVFACAVMGGAIGLASAVSPGVWRVVRPVCDMLQTIPLFVFLIPVLMVFQIGEF 550

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +  L +    I     Y       G  + P +  E A++   T W+  + I  P   P  
Sbjct: 551 SAFLAIIAYAIVPMIRY----TRHGLVSTPEEMIEAATASGATTWQMLKDIRAPYAAPSI 606

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G       A+   +++ +         TTGLG  I  +  +      +     M    
Sbjct: 607 LLGLNQTILYAFAMLVIAALIG-------TTGLGQSIYLALGQADVGLGISAGAAMAILA 659

Query: 567 LALNRFL 573
           L  +R +
Sbjct: 660 LIADRMV 666


>gi|317403097|gb|EFV83629.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 251

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 9/192 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R+     +A    I  G+           ++    +L + P+  + PL +  + +  
Sbjct: 59  TLGRLGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  + +++     +    +V+    +        A     T W   + + LP + P 
Sbjct: 118 ---STPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATPWGLVKRVYLPAVMPE 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TGA  A G AW A I +E+           GLG  +A S E      V+  +L++   
Sbjct: 175 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 229

Query: 566 VLALNRFLWHPL 577
              +++F+   L
Sbjct: 230 AALIDQFVLENL 241



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 96/252 (38%), Gaps = 14/252 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R+    +  +L  + +     + L       VP  +++ +   L   S  Q    T  R
Sbjct: 4   ARKHLAGVLGVLFILALWQAAALALPDFLMPGVP-AVLERLFEDLGKQSFHQSLMGTLGR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++L     +  +AA       VL   + I+QSIP + ++   ++          
Sbjct: 63  LGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMG------- 115

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +  S  +    S+  +  ++ R     +R    + W     + +P  MP 
Sbjct: 116 -FGSTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATPWGLVKRVYLPAVMPE 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  +
Sbjct: 175 LITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMTNILVIAVL 229

Query: 252 IFLYDQLLFRPM 263
             L DQ +   +
Sbjct: 230 AALIDQFVLENL 241


>gi|152980798|ref|YP_001354173.1| ABC-type sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151280875|gb|ABR89285.1| ABC-type sulfonate/nitrate transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 294

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 92/242 (38%), Gaps = 10/242 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++  ++                   +   +    L      +   +L    I +L
Sbjct: 51  LVVLAVIWEVVARWQDNELLLPTFIATAQALVEGISSGELLAKVGISLSVLLQGYAIGVL 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+  TLA  ++    +L  +  ++  +P +  L   +++F             + +F 
Sbjct: 111 AAFILTTLAVSTQLGRDLLDTLTSMLNPLPAIALLPLALLWFGIGRG--------SLVFV 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W M  + Y     +P  L    R++ L G      + VP ++P ++  + +  +
Sbjct: 163 LVHSVLWPMALNTYAGFQGVPDTLRMAGRNYGLRGIPYVLQILVPAALPAILSGLKIGWA 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   + T++ +  + + ++FR
Sbjct: 223 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLATVILIGLMVENIVFR 280

Query: 262 PM 263
            +
Sbjct: 281 TL 282



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 6/201 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++  ++    I  +    +             +     +L   PA    PL
Sbjct: 88  GELLAKVGISLSVLLQGYAIGVLAAFILTTLAVSTQLGRDLLDTLTSMLNPLPAIALLPL 147

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  AG    P+  +    ++ + G  +   
Sbjct: 148 ALLWFGIGRGS----LVFVLVHSVLWPMALNTYAGFQGVPDTLRMAGRNYGLRGIPYVLQ 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  ++G       AW   I +E+           GLG YI ++  +    +V 
Sbjct: 204 ILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVF 261

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
            G+  +    L +   ++  L
Sbjct: 262 AGLATVILIGLMVENIVFRTL 282


>gi|190894909|ref|YP_001985202.1| putative glycine betaine/L-proline ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700570|gb|ACE94652.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
 gi|327189109|gb|EGE56295.1| putative glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 282

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 90/234 (38%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
              +  I + L G +   V    +  V + L     L      T   +L+A VI+L    
Sbjct: 51  PFYVIAIVVALIGWRLVNVWFAALSGVALALCFSMGLWPETMSTLALVLTATVIALAIGI 110

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A     L   + P LD++Q++P   +L   +                 A+ A   
Sbjct: 111 PIGIAAGFFTALDRFMEPGLDLIQTLPPYIYLLPAIALLGYG--------PATALIATVI 162

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V          +   P++  E+  +  ++  + F+ + +PF++P ++  +  S+   +
Sbjct: 163 VAVPPAVRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSLMMAF 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + ++  G       G+G  I  AI+  D+   + A + ++ +  + D++
Sbjct: 223 GMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINAAIAIVVLTMVIDRI 269



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 87/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L++  F V+  V   I W+ +       +   +     +G       T+  V+   
Sbjct: 43  ILWLLELPPFYVIAIVVALIGWRLVNVWFAALSGVALALCFSMGLWPETMSTLALVLTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA  I IP+GI  GF   +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 VIALAIGIPIGIAAGFFTALDRFMEPGLDLIQTLPPYIYLLPAIALLGYGPATALIATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 163 V----AVPPAVRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         +   + +    + ++R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINAAIAIVVLTMVIDRI 269


>gi|322375779|ref|ZP_08050291.1| choline transporter [Streptococcus sp. C300]
 gi|321279487|gb|EFX56528.1| choline transporter [Streptococcus sp. C300]
          Length = 511

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I +P+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 38  AIFIAVPLAVFLRYHEKMADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 97

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 98  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 153

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 154 IIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFLL 203



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       ++   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 38  AIFIAVPLAVFLRYHEKMADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 89

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 90  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR- 148

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 149 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGALSSAVLAIAF 199

Query: 256 DQLL 259
           + LL
Sbjct: 200 NFLL 203


>gi|324326888|gb|ADY22148.1| putative sulfonate ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 282

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 37/245 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLIRLLEV----------KFLRWRD 274

Query: 269 KFRLE 273
            F+ E
Sbjct: 275 NFKGE 279



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 391 VVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   +  S+     G +IG            F       + P  Q+L   P     PL V
Sbjct: 78  LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFV 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   +      LL+  G  + +  N   G     +   +VA     +  +    +I
Sbjct: 138 LWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLI 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G
Sbjct: 194 LPAALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVG 247

Query: 559 VLIMCCFVLALNRFL 573
           ++I        +  +
Sbjct: 248 IIIFAFVGKFSDSLI 262


>gi|288959813|ref|YP_003450153.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288961115|ref|YP_003451454.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288912121|dbj|BAI73609.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288913423|dbj|BAI74910.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 303

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 6/161 (3%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +  +     +    PA    P+ +       ++    L  +++    W +  N  AG ++
Sbjct: 135 NDLLSTLTSMFNPLPAIALLPIAMLWFGLGEVS----LVFVLVHAVLWPLALNTHAGFTS 190

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +    ++ + G R+   +++P  FP  +TG       AW   I +E+     +  
Sbjct: 191 VSETLRMAGRNYGLGGLRYVVTLLIPAAFPAILTGLKVGWAFAWRTLIAAELVFG--VSS 248

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              GLG +I ++  +    +V  G++ +    L +   ++ 
Sbjct: 249 GKGGLGWFIFQNRNELYIDKVFAGLVTVILIGLLVENVVFR 289



 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 87/201 (43%), Gaps = 10/201 (4%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  +   +L    ++L+   +  T+A  +R    +L  +  +   +P +  L   +
Sbjct: 99  LLSMAWTSLSVLLKGYAVALVLAVLLTTVAVSTRIGNDLLSTLTSMFNPLPAIALLPIAM 158

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F           E++ +F +  + +W +  + +    ++   L    R++ L G +  
Sbjct: 159 LWFGLG--------EVSLVFVLVHAVLWPLALNTHAGFTSVSETLRMAGRNYGLGGLRYV 210

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P + P ++  + +  +  W  ++A+E++    +     G+G +I     E  +  
Sbjct: 211 VTLLIPAAFPAILTGLKVGWAFAWRTLIAAELVFGVSS--GKGGLGWFIFQNRNELYIDK 268

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +   ++T++ +  L + ++FR
Sbjct: 269 VFAGLVTVILIGLLVENVVFR 289


>gi|302869921|ref|YP_003838558.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|302572780|gb|ADL48982.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
          Length = 276

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--------- 378
           P   ++     R + +       V+   A  +    +  +                    
Sbjct: 13  PRPAVRRGMAVRPAAVGLPALGLVIAVAAWWLVTSGLSLVHPAALPPPQAVGKSLAGTTE 72

Query: 379 -VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT +  V   +++S   + +G+ +     +     P    + A P   F PL+
Sbjct: 73  VLLPALGITTWMTVFGFLLSSAAGVLIGMALAASRRVERMFAPLLVAVNAVPKIAFGPLL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  V +        +  ++     + I+ +   G +  P D  E+  S + + W+ +R +
Sbjct: 133 VVAVGWGQK----PILTMVFLLCFFPIVLSTATGLTTTPADLAELGRSLNASWWQSFRKV 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   P    G   A   A   +++ E       +    GLG  I +    G       
Sbjct: 189 RFPAALPQIFVGLKVAMPLAAIGAVIGEF------YSDRPGLGYQILQYNGVGDTATAWA 242

Query: 558 GVLIMCCFVLAL 569
            ++++    + L
Sbjct: 243 AIVLVALMSIVL 254



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 92/260 (35%), Gaps = 22/260 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHS----LPQYASRTT 69
           + P    L A  LVI +    L+        P  +     +   +      L      TT
Sbjct: 23  VRPAAVGLPALGLVIAVAAWWLVTSGLSLVHPAALPPPQAVGKSLAGTTEVLLPALGITT 82

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
              +   ++S     +     A SRR+  +  P+L  + ++P + F    VV        
Sbjct: 83  WMTVFGFLLSSAAGVLIGMALAASRRVERMFAPLLVAVNAVPKIAFGPLLVVAVGWG--- 139

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                +   +  +F    + +  S    L   P DL E+ RS   S WQ F  +  P ++
Sbjct: 140 -----QKPILTMVFLLCFFPIVLSTATGLTTTPADLAELGRSLNASWWQSFRKVRFPAAL 194

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--- 246
           P +   + ++M        A+   V+G+     PG+G  I       D      A++   
Sbjct: 195 PQIFVGLKVAMPL------AAIGAVIGEFYSDRPGLGYQILQYNGVGDTATAWAAIVLVA 248

Query: 247 TMLGVIFLYDQLLFRPMIVW 266
            M  V++    L+ R  + W
Sbjct: 249 LMSIVLYAVLSLVERLALPW 268


>gi|114569621|ref|YP_756301.1| glycine betaine ABC transporter substrate-binding protein
           [Maricaulis maris MCS10]
 gi|114340083|gb|ABI65363.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Maricaulis maris MCS10]
          Length = 525

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 13/202 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              LP   +   L  L+A+++ L  +     LAA   RL  V++    ++Q+IP L  L 
Sbjct: 9   WAELPDLLAGHMLLSLAAILVGLSISLPLGILAASRPRLAAVVLNAASVIQTIPGLALLA 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V     +           A  A+    +  +  +    L  +   + E +R   ++  
Sbjct: 69  LMVPLLGGMIG------YAPAFLALMLYSILPILRNTIVGLQGLDPVVREAARGIGMTPR 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++ W + +P ++P +V  +  ++   W    A+    VG +      +G+YI   ++ ++
Sbjct: 123 ERLWQVELPLALPVIVAGLRTAV--VWVVGAATLATPVGASS-----LGNYIFAGLQTRN 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
            L++L+  L   G+    DQ++
Sbjct: 176 WLSVLFGCLFAAGLAIALDQII 197



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 11/211 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +  L    M   +  I++   I +P+GI    RP +++ +   A ++   P      
Sbjct: 9   WAELPDLLAGHMLLSLAAILVGLSISLPLGILAASRPRLAAVVLNAASVIQTIPGLALLA 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  +    +       L ++  +   IL N I G        +E A    +T      
Sbjct: 69  LMVPLLG--GMIGYAPAFLALMLYSILPILRNTIVGLQGLDPVVREAARGIGMTPRERLW 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  V G  TA      A+ ++         +  + LG YI    +  ++  V
Sbjct: 127 QVELPLALPVIVAGLRTAVVWVVGAATLA-------TPVGASSLGNYIFAGLQTRNWLSV 179

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + G L      +AL++ +   L     R  R
Sbjct: 180 LFGCLFAAGLAIALDQII--RLLEVAARDRR 208


>gi|296129229|ref|YP_003636479.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296021044|gb|ADG74280.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 288

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 81/200 (40%), Gaps = 14/200 (7%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  +        +   L  + + +  R+L    I  L     A     SR   ++L
Sbjct: 72  QLPAPASVWRAAVDLAERGDLQTHVAISVQRVLIGFAIGALAALAVAAFVGLSRAGDVLL 131

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P L  ++++P L ++   +++       K+    + A F ++T+        +  +L +
Sbjct: 132 APTLAAIRAVPSLAWVPLLILWMKIGEESKITLVAIGAFFPVYTT--------VAAALRH 183

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L E  R+F L G + F  + +P  +P ++  + + ++  W F+VA+E+I       
Sbjct: 184 VDPHLVEAGRAFGLRGVELFRSVQLPAVIPSVMSGLRLGLAQAWLFLVAAELIAAS---- 239

Query: 221 PLPGIGSYIALAIKEQDLLA 240
              G+G  +  +     +  
Sbjct: 240 --MGLGFLLTDSQNNGRVDR 257



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 80/240 (33%), Gaps = 16/240 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G  R      + +  +      +L +    V   V                 ++  + + 
Sbjct: 28  GPTRPASASFWSRRSTRVVGGAVLPLLLLTVWHLVTTSGLVPPYQLPAPASVWRAAVDLA 87

Query: 381 WLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
             G       I++ RV++   I ++  + V  ++G        + P    + A P+  + 
Sbjct: 88  ERGDLQTHVAISVQRVLIGFAIGALAALAVAAFVGLSRAGDVLLAPTLAAIRAVPSLAWV 147

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++  +     +       L+  G  + +   V A          E   +F + G   +
Sbjct: 148 PLLILWMKIGEESK----ITLVAIGAFFPVYTTVAAALRHVDPHLVEAGRAFGLRGVELF 203

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP + P  ++G       AW   + +E+ +       + GLG  + +S   G    
Sbjct: 204 RSVQLPAVIPSVMSGLRLGLAQAWLFLVAAELIA------ASMGLGFLLTDSQNNGRVDR 257


>gi|195978160|ref|YP_002123404.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974865|gb|ACG62391.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 505

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 15/178 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L +KS+R   +++ +  + Q+IP L  L         L+   +      A+ A
Sbjct: 31  IGIPLAALLSKSKRWSNIILQLTGVFQTIPSLALL--------GLFIPLMGIGTAPAVTA 82

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    L  I   L E   +F ++ W++     +P +MP ++  +  S  
Sbjct: 83  LVIYAIFPILQNTITGLNAIDPSLVEAGTAFGMTKWERLKIFEIPIAMPVIMSGVRTSAV 142

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   + +I  G       G+G++I L I   +   I+   ++   ++ +++ LL
Sbjct: 143 MIIGTATLASLIGAG-------GLGTFILLGIDRNNAQLIVIGAVSSALLVIVFNSLL 193



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 12/188 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+   +      S+ I     +    P+     L +  +          L +  IF 
Sbjct: 31  IGIPLAALLSKSKRWSNIILQLTGVFQTIPSLALLGLFIPLMGIGTAPAVTALVIYAIF- 89

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL N I G +A      E  ++F +T W   +   +P   P  ++G  T+      
Sbjct: 90  ---PILQNTITGLNAIDPSLVEAGTAFGMTKWERLKIFEIPIAMPVIMSGVRTSAVMIIG 146

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
            + ++ +   G       GLG +I    ++ +   +V+G +     V+  N  L   L  
Sbjct: 147 TATLASLIGAG-------GLGTFILLGIDRNNAQLIVIGAVSSALLVIVFNSLL-RYLEK 198

Query: 580 YGTRCLRL 587
              R + +
Sbjct: 199 ASLRRITI 206


>gi|170751221|ref|YP_001757481.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170657743|gb|ACB26798.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 334

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 10/198 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +      D   +      ++  +     I +     +G+ IG    +     P  + +  
Sbjct: 122 ILEVFLDDWPKLGGSILNSLILLSGGYAIGAATGFVLGVAIGTFRAVGYWAHPVLRFVGP 181

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + PL          +     + L+   T + +     +G +     + +VA +  
Sbjct: 182 LPATAWLPLAFFVFP----SSWSASTFLVALATGFPVTVLTWSGVAGVNKAYFDVARTLG 237

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +       + +P   P+   G     GG++   +V+E+          +GLG Y+  + 
Sbjct: 238 ASRGFLILRVAIPAALPHVFVGLFMGLGGSFAVLVVAEMLG------VKSGLGWYLQWAQ 291

Query: 548 EKGSFPEVVLGVLIMCCF 565
              ++  +   +++M   
Sbjct: 292 GWAAYANMYAALIVMALM 309



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 14/195 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      + + +     I     FV        R +G    P+L  +  +P   +L
Sbjct: 129 DWPKLGGSILNSLILLSGGYAIGAATGFVLGVAIGTFRAVGYWAHPVLRFVGPLPATAWL 188

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A+ F +  +  + +T   +  +  + +   +V+R+   S 
Sbjct: 189 PLAFFVF--------PSSWSASTFLVALATGFPVTVLTWSGVAGVNKAYFDVARTLGASR 240

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P +   + M + G +  +V +EM+ V        G+G Y+  A    
Sbjct: 241 GFLILRVAIPAALPHVFVGLFMGLGGSFAVLVVAEMLGVKS------GLGWYLQWAQGWA 294

Query: 237 DLLAILYAMLTMLGV 251
               +  A++ M  +
Sbjct: 295 AYANMYAALIVMALM 309


>gi|88856241|ref|ZP_01130901.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1]
 gi|88814560|gb|EAR24422.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1]
          Length = 283

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 12/252 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQ 362
              P+ +NV+ +   +                   +  +L + W        VA      
Sbjct: 10  LERPVVDNVEAVPAAISGSPRRRRRWGRATVLGAVIPIVLIVLWQTIATSGLVASYRLPT 69

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +          +   +     I+  RV+V   + S++ + +   +G    +S    P  
Sbjct: 70  PLSVWAAGVDLYERGVLYQHVAISTQRVLVGFAVGSVVGLVLAAIVGLSTRVSELFAPTL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+  + PL+   + Y           L+  G  + +   V +          E+
Sbjct: 130 GALRAVPSLAWVPLLGLYLGYGED----PKVALIAIGAFFPVYTTVASALRHVDAHLVEL 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             S+  +G      + LP + P  ++    A   AW   +  E+         + GLG  
Sbjct: 186 GRSYGYSGPALLSLVQLPAVVPAVISSLRLALAQAWLFLVAGELLG------ASLGLGYL 239

Query: 543 IAESTEKGSFPE 554
           + +S + G    
Sbjct: 240 LVDSQQNGRIDR 251



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 97/238 (40%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  +++   I    L        P  +        +   L Q+ + +T R+L    +  +
Sbjct: 47  IVLIVLWQTIATSGLVASYRLPTPLSVWAAGVDLYERGVLYQHVAISTQRVLVGFAVGSV 106

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A +   S R+  +  P L  ++++P L ++    +Y       KV    + A F 
Sbjct: 107 VGLVLAAIVGLSTRVSELFAPTLGALRAVPSLAWVPLLGLYLGYGEDPKVALIAIGAFFP 166

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++T+        +  +L ++   L E+ RS+  SG      + +P  +P ++ ++ ++++
Sbjct: 167 VYTT--------VASALRHVDAHLVELGRSYGYSGPALLSLVQLPAVVPAVISSLRLALA 218

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W F+VA E++          G+G  +  + +   +  +   ++ +  +  + D  +
Sbjct: 219 QAWLFLVAGELLGAS------LGLGYLLVDSQQNGRIDRLFLTIILLGLLGKITDTAV 270


>gi|221064975|ref|ZP_03541080.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220709998|gb|EED65366.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 258

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 18/245 (7%)

Query: 17  PNIFDLLAFVLVIGIINILL-----HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           P  +  L   +   ++ +L              P  ++      +    L      + LR
Sbjct: 11  PARWRGLVLPVAAVLLWVLASHFQWVNSALLVSPLQVLATGLDLVTSGQLWLNLRASLLR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L+  VI      V   L     R G ++ P  +  + I +  ++    V+F      KV
Sbjct: 71  ELTGFVIGSTCGLVLGGLLGLWPRFGRLVGPSFNTFKQISLFAWIPLISVWFGLGDVAKV 130

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   LAA+          +  +    + + P  L EV+R +  + WQ  W++ +P +   
Sbjct: 131 VFLSLAALV--------PVVVNTVDGIRSTPASLLEVARVYGYTRWQTTWHVVLPSAAAS 182

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +++   W   + +E ++V        G+G+ +    +   +  +L+ M+T+  V
Sbjct: 183 IFTGIYLALVYSWLATIGAEYLLVAGR-----GVGNLLIEGSEHFRMDLVLFGMVTIGFV 237

Query: 252 IFLYD 256
            +L +
Sbjct: 238 GWLMN 242



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 9/231 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +L          V   +    +  +           +      ++ R +   +I S 
Sbjct: 21  VAAVLLWVLASHFQWVNSALLVSPLQVLATGLDLVTSGQLWLNLRASLLRELTGFVIGST 80

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G  +G  P     + P            + PL+        +   ++LS      
Sbjct: 81  CGLVLGGLLGLWPRFGRLVGPSFNTFKQISLFAWIPLISVWFGLGDVAKVVFLS----LA 136

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++ N + G  + P    EVA  +  T W+   +++LP       TG   A   +W 
Sbjct: 137 ALVPVVVNTVDGIRSTPASLLEVARVYGYTRWQTTWHVVLPSAAASIFTGIYLALVYSWL 196

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A+I +E        +   G+G  + E +E      V+ G++ +      +N
Sbjct: 197 ATIGAEYLL-----VAGRGVGNLLIEGSEHFRMDLVLFGMVTIGFVGWLMN 242


>gi|209547287|ref|YP_002279205.1| betaine/proline ABC transporter permease [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209538531|gb|ACI58465.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 282

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 89/234 (38%), Gaps = 16/234 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F ++  ++ ++   +            + +   +  L      T   +L+A VI+L    
Sbjct: 52  FYVIALVVALIGWRLVNVWFALSSGVALALCFSMG-LWPETMSTLALVLTATVIALAIGI 110

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A     L   + P LD++Q++P   +L   +                 A+ A   
Sbjct: 111 PIGIAAGFFTALDRFMEPSLDLIQTLPPYIYLLPAIAMLGYG--------PATALIATVI 162

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V          +   P++  E+  +  ++  + F+ + +PF++P ++  +  S+   +
Sbjct: 163 VAVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSLMMAF 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + ++  G       G+G  I  AI+  D+   +   + ++ +  + D++
Sbjct: 223 GMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINGAIAIVVLTMVIDRI 269



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L +  F V+  V   I W+ +       +   +     +G       T+  V+   
Sbjct: 43  ILWLLQLPPFYVIALVVALIGWRLVNVWFALSSGVALALCFSMGLWPETMSTLALVLTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA  I IP+GI  GF   +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 VIALAIGIPIGIAAGFFTALDRFMEPSLDLIQTLPPYIYLLPAIAMLGYGPATALIATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 163 V----AVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         + G + +    + ++R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINGAIAIVVLTMVIDRI 269


>gi|116696153|ref|YP_841729.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530652|emb|CAJ96999.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 293

 Score = 95.0 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 97/248 (39%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LLA  L+  ++  +             +      +    LP  A+ +   +L      ++
Sbjct: 50  LLALGLIWELVARVQDNDLLLPSCLATMRAFGDAVASGELPGKAAISLSVLLRGYAAGIV 109

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV  +LA  +R    VL  +  +   +P +  L   +++F             + +F 
Sbjct: 110 LAFVLTSLAVSTRFGRDVLDTLTAMFNPLPAIALLPLALLWFGLG--------TKSLVFV 161

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  +MY     +P  L    R++ L G +    + VP ++P ++  + +  +
Sbjct: 162 LVHSVLWPLALNMYAGFRAVPPTLRMAGRNYGLRGLRYVALVLVPAALPAILSGLKIGWA 221

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I     E     +   +  ++ +  L + L+F 
Sbjct: 222 FAWRTLIAAELVFGASS--GQGGLGWFIFQNRNELYTDRVFAGLAAVILIGLLVEGLVFT 279

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 280 TLERLTVR 287



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N+ AG  A P   +    ++ + G R+   +++P   P  ++G  
Sbjct: 158 LVFVLVHSVLWPLALNMYAGFRAVPPTLRMAGRNYGLRGLRYVALVLVPAALPAILSGLK 217

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG +I ++  +     V  G+  +    L +  
Sbjct: 218 IGWAFAWRTLIAAELVFGASS--GQGGLGWFIFQNRNELYTDRVFAGLAAVILIGLLVEG 275

Query: 572 FLWHPLYLYGTRC 584
            ++  L     R 
Sbjct: 276 LVFTTLERLTVRR 288


>gi|281491337|ref|YP_003353317.1| glycine betaine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
 gi|281375078|gb|ADA64596.1| Glycine betaine ABC transporter, permease and substrate-binding
           protein [Lactococcus lactis subsp. lactis KF147]
          Length = 500

 Score = 95.0 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 19/202 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L ++   + + +  A++IS+        L    +    VL  +  I Q+IP L  L 
Sbjct: 16  WQALLEHIQISLISIFIAILISIPLAL---LLRRLPKIAEPVLQ-VTGIFQTIPSLALLG 71

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             L AI A+    ++ +  + Y  L  I   L E + +F ++  
Sbjct: 72  LLIPFIGIG--------SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNRR 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++     +  +MP ++  +  S          + +I  G       G+G++I L I   D
Sbjct: 124 ERLMKFELSLAMPFIMAGIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMND 176

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  IL   ++   +  ++  LL
Sbjct: 177 VSLILIGAISSALLAIIFSSLL 198



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 19/184 (10%)

Query: 398 SIIWIPVGIWIGFRPHIS-----SKIQPFAQ---LLAAFPANVFFPLVVSCVSYYHLNPN 449
           S+I I + I I     +         +P  Q   +    P+     L++  +       +
Sbjct: 26  SLISIFIAILISIPLALLLRRLPKIAEPVLQVTGIFQTIPSLALLGLLIPFIGIG----S 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   + ++    + I+ N   G         E A++F +          L    P+ + G
Sbjct: 82  LPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNRRERLMKFELSLAMPFIMAG 141

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++ +   G       GLG +I           +++G +      +  
Sbjct: 142 IRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMNDVSLILIGAISSALLAIIF 194

Query: 570 NRFL 573
           +  L
Sbjct: 195 SSLL 198


>gi|300215311|gb|ADJ79726.1| Glycine betaine transport system permease protein/glycine
           betaine-binding protein [Lactobacillus salivarius CECT
           5713]
          Length = 507

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  SDLLTALWQH---LGISLAALVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEEAADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+A+VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  SDLLTALWQHLGISLAALVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|301065482|ref|YP_003787505.1| binding-protein-dependent transport systems inner membrane protein
           [Lactobacillus casei str. Zhang]
 gi|300437889|gb|ADK17655.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Lactobacillus casei str.
           Zhang]
          Length = 509

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 20/188 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++ +L+     A      +R   +   I  I Q+IP L  L   + +          
Sbjct: 27  LISLLFALIIALPLALAVVHHQRTAGIFTQIAGIFQTIPSLAVLGLLIPFVGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  S    + +I   LEE + +F ++  +K + + +P +MP +
Sbjct: 81  --TIPAITALVIYAILPIFSSTLAGIGSIDDALEEAADAFGMNRREKIFRVELPLAMPTI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
           V  +  ++      ++ +  +     +I   G+G +I L I   +     + AI  A+L 
Sbjct: 139 VTGIRQAI----VMIIGTGTLAA---LIGAGGLGDFILLGIDRNNNAMTLIGAIASALLA 191

Query: 248 MLGVIFLY 255
           ++    +Y
Sbjct: 192 IIFSGGIY 199



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A II +P+ + +      +      A +    P+     L++  V    +    
Sbjct: 27  LISLLFALIIALPLALAVVHHQRTAGIFTQIAGIFQTIPSLAVLGLLIPFVGIGTIPAIT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  I      I  + +AG  +  +  +E A +F +        + LP   P  VTG 
Sbjct: 87  ALVIYAIL----PIFSSTLAGIGSIDDALEEAADAFGMNRREKIFRVELPLAMPTIVTGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A         ++ +   G       GLG +I    ++ +    ++G +      +  
Sbjct: 143 RQAIVMIIGTGTLAALIGAG-------GLGDFILLGIDRNNNAMTLIGAIASALLAIIF 194


>gi|260654621|ref|ZP_05860111.1| ABC transporter permease protein [Jonquetella anthropi E3_33 E1]
 gi|260630637|gb|EEX48831.1| ABC transporter permease protein [Jonquetella anthropi E3_33 E1]
          Length = 333

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 96/251 (38%), Gaps = 19/251 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV--PITLDVHSLPQYASRTTLRMLSAMVISL 80
           L F+L++G   + L   +        VD +      D   L      + + + +      
Sbjct: 92  LVFLLLLGYDWVTLKTGKFVLPYFPWVDQILNAAIEDRLQLLDCTWHSLMLLFTGYFTGA 151

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   +       ++R+   + P + ++ +IP   ++   +V   +L+ G        ++F
Sbjct: 152 LLGLLTGVACGYNKRVDYWIAPFMRLLGAIPSTTWIPVVMVLASSLFKG--------SVF 203

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I     +++T +    + NI +   E +R+         + + +PF++P ++  +   M
Sbjct: 204 IIALGVWYSLTIATITGIRNIDKSFYEAARTLGAKTRHLVFRVALPFALPNILQGLTQGM 263

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL- 259
           S     ++ +EMI V        G+G Y+           +  A++ +  V    + LL 
Sbjct: 264 SSACMALMVAEMIGVES------GLGWYVTWQKSWAQYGKMYAAIVVLCVVFVAVNWLLN 317

Query: 260 --FRPMIVWSN 268
              R ++ W  
Sbjct: 318 KIKRRLLRWQE 328



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 95/251 (37%), Gaps = 27/251 (10%)

Query: 348 WFCVVCGVAIGIAWQSIG---YIVNHFTY---------QDVLYVIWLGCITMFRVVVLII 395
           ++ +V  + +G  W ++    +++ +F +         +D L ++     ++  +     
Sbjct: 89  FYSLVFLLLLGYDWVTLKTGKFVLPYFPWVDQILNAAIEDRLQLLDCTWHSLMLLFTGYF 148

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
             +++ +  G+  G+   +   I PF +LL A P+  + P+V+   S          S+ 
Sbjct: 149 TGALLGLLTGVACGYNKRVDYWIAPFMRLLGAIPSTTWIPVVMVLASSLFKG-----SVF 203

Query: 456 MIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +I    WY L    I G       F E A +           + LP   P  + G     
Sbjct: 204 IIALGVWYSLTIATITGIRNIDKSFYEAARTLGAKTRHLVFRVALPFALPNILQGLTQGM 263

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573
             A  A +V+E+          +GLG Y+        + ++   ++++C   +A+N  L 
Sbjct: 264 SSACMALMVAEMIG------VESGLGWYVTWQKSWAQYGKMYAAIVVLCVVFVAVNWLLN 317

Query: 574 --WHPLYLYGT 582
                L  +  
Sbjct: 318 KIKRRLLRWQE 328


>gi|158424203|ref|YP_001525495.1| ABC transport inner membrane component protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331092|dbj|BAF88577.1| ABC transport inner membrane component protein [Azorhizobium
           caulinodans ORS 571]
          Length = 260

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   +    I S+  + VGI I         + P    + + P     PL++    + 
Sbjct: 60  FTLLSTLTGYAIGSLAAVVVGILIAESETFEKFVFPLIVAVQSMPKVALAPLILVWFGFG 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++  + ++LL      + +L N I G      +  E+  SF+ +    + ++ LP    
Sbjct: 120 LMSKVVLVALL----CFFPLLVNTIVGIRRTDPELVEMCRSFNRSRAFIFLHVKLPSAAS 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G       A   ++V E  +         GLG  I  +T   S   +  GVLI+  
Sbjct: 176 SIFAGLQIGIVLALIGAVVGEFIASEQ------GLGYLIGSATVNMSVSTMFAGVLILAA 229

Query: 565 FVLA---LNRFLWHPLYLY 580
             +A   L RF+   +  +
Sbjct: 230 IGMAGSSLMRFIAKRIVFW 248



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   L   S   +   T L  L+   I  L   V   L A+S      + 
Sbjct: 35  LPPPGAVFSTLYGGLVDGSYWPHIRFTLLSTLTGYAIGSLAAVVVGILIAESETFEKFVF 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +QS+P +      +V+F      KV+   L   F         +  +    +   
Sbjct: 95  PLIVAVQSMPKVALAPLILVWFGFGLMSKVVLVALLCFF--------PLLVNTIVGIRRT 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L E+ RSF  S    F ++ +P +   +   + + +       V  E I        
Sbjct: 147 DPELVEMCRSFNRSRAFIFLHVKLPSAASSIFAGLQIGIVLALIGAVVGEFIA------S 200

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             G+G  I  A     +  +   +L +  +        + + + ++ W
Sbjct: 201 EQGLGYLIGSATVNMSVSTMFAGVLILAAIGMAGSSLMRFIAKRIVFW 248


>gi|295107647|emb|CBL05190.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Gordonibacter pamelaeae 7-10-1-b]
          Length = 299

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 93/252 (36%), Gaps = 23/252 (9%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----------HSLPQYASRT 68
           +  L   + + G+  +  +G   + +           L             S+  +   +
Sbjct: 44  VAGLTVVLAIWGLFALFFNGTGASALRFPTPVETFARLSEYLFEGRSLYGQSIYAHVGAS 103

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+L A  ++  F  V  ++     R+  + +  + I Q IP L +L   ++ F     
Sbjct: 104 VQRLLVAFSLAAAFGIVLGSVLGYFTRIYAIGMAPVSIFQMIPGLAWLPIAILLFGLG-- 161

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 + +A+F IF      +T  +   +  +P  L   ++    SG   F  + VP +
Sbjct: 162 ------DESAVFIIFAVSSMVITVDVAGGIRMVPAVLVRAAKMAGASGPAIFLKVLVPQA 215

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              ++  + + MS  W  ++A+EM+V         G+G  I L     D +     +  +
Sbjct: 216 SVSIINALRVGMSSAWRVLIAAEMVVGTGI-----GLGYSIELTRDLLDYVGAFACIAVI 270

Query: 249 LGVIFLYDQLLF 260
             +    D+++ 
Sbjct: 271 CVIGLAIDRVVL 282



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 64/190 (33%), Gaps = 9/190 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++V   +A+   I +G  +G+   I +       +    P   + P+ +     
Sbjct: 101 GASVQRLLVAFSLAAAFGIVLGSVLGYFTRIYAIGMAPVSIFQMIPGLAWLPIAILLFGL 160

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++   +   I  +V  G    P      A     +G   +  +++P   
Sbjct: 161 GDES----AVFIIFAVSSMVITVDVAGGIRMVPAVLVRAAKMAGASGPAIFLKVLVPQAS 216

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +         AW   I +E+           GLG  I  + +   +      + ++C
Sbjct: 217 VSIINALRVGMSSAWRVLIAAEMVVG-----TGIGLGYSIELTRDLLDYVGAFACIAVIC 271

Query: 564 CFVLALNRFL 573
              LA++R +
Sbjct: 272 VIGLAIDRVV 281


>gi|116249197|ref|YP_765038.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253847|emb|CAK12242.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 282

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 77/199 (38%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +L+A  ++L         A     L   + P LD++Q++P   +L   
Sbjct: 86  GLWPETMSTLALVLTATALALAIGIPIGIAAGFLPALDRFMEPGLDLIQTLPPYIYLLPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +                 A+ A     V          +   P++  E+  +  ++  + 
Sbjct: 146 IALLGYG--------PATALIATVIVAVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKM 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +PF++P ++  +  S+   +  VV + ++  G       G+G  I  AI+  D+ 
Sbjct: 198 FFKIRLPFALPSIMAGINQSLMMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIA 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
             +   + ++ +  + D++
Sbjct: 251 TSINGAIAIVVLTMVLDRI 269



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L +  F +V  +   I W+ +       +   +     +G       T+  V+   
Sbjct: 43  ILWLLQLPPFYLVALIVALIGWRLVNVWFALLSGAALALCFSMGLWPETMSTLALVLTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A  I IP+GI  GF P +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 ALALAIGIPIGIAAGFLPALDRFMEPGLDLIQTLPPYIYLLPAIALLGYGPATALIATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 163 V----AVPPAIRLTSLGIRMTPKEFIELGEALGMTPAKMFFKIRLPFALPSIMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         + G + +    + L+R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINGAIAIVVLTMVLDRI 269


>gi|284045703|ref|YP_003396043.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949924|gb|ADB52668.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 283

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 91/271 (33%), Gaps = 23/271 (8%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----- 370
             ++    R +      +  +  R+  +       ++  +AI + WQ    +        
Sbjct: 3   AVQSAAPTRENGASEQARPSAGARMRTIAGHVLPPLLFLIAILVIWQVGVKVSGTEESTL 62

Query: 371 FTYQDVLYVIW--------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
               DV   +W           +T+  +++   +A ++ + + + +         + P+ 
Sbjct: 63  PAPTDVFSAMWDNRTLLADNAWVTIKEILIGYSLAIVLGVGLAVLLASSVLAERAMYPWL 122

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +    P     P++V    +          ++++  + + I  N + G  +   +   +
Sbjct: 123 VVSQMVPIPAIAPILVIWTGF----DMRPKVIVIMLVSFFPIAVNTLDGLKSTEPELLNL 178

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +     W+ +R   LP   P+  +G       +   ++ +E            GLG  
Sbjct: 179 LKTLGAGRWKRFRTAQLPSSLPFLFSGLKIGAALSVIGAVFAEWVG------ADAGLGYL 232

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I     + +  E+   ++++    +AL   +
Sbjct: 233 ILTLNNQVATAEMFATIIVLAAIGIALFGLV 263



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 100/269 (37%), Gaps = 18/269 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I+  + P +  L+A +++  +  + + G +E+T+P        +  +   L   A  T  
Sbjct: 30  IAGHVLPPLLFLIAILVIWQV-GVKVSGTEESTLPAPTDVFSAMWDNRTLLADNAWVTIK 88

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +L    ++++     A L A S      + P L + Q +PI       V++       K
Sbjct: 89  EILIGYSLAIVLGVGLAVLLASSVLAERAMYPWLVVSQMVPIPAIAPILVIWTGFDMRPK 148

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VI         I     + +  +    L +   +L  + ++     W++F    +P S+P
Sbjct: 149 VI--------VIMLVSFFPIAVNTLDGLKSTEPELLNLLKTLGAGRWKRFRTAQLPSSLP 200

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLT 247
            L   + +  +      V +E +          G+G  I     +    ++ A +  +  
Sbjct: 201 FLFSGLKIGAALSVIGAVFAEWVG------ADAGLGYLILTLNNQVATAEMFATIIVLAA 254

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
           +   +F   +L  R ++ W +  R E   
Sbjct: 255 IGIALFGLVRLFERLLLPWYHAGRKENNA 283


>gi|170740427|ref|YP_001769082.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168194701|gb|ACA16648.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 277

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 17/245 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             + + L   +    P  I+  +        L  + + +  R+ +          +   +
Sbjct: 44  AAVRLGLAQGRLVPPPSRILATLWALAATGELWIHVAASLTRVAAGFACGAAAGILLGAV 103

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
                 +  +L P L  +++IP + ++   +++F           E + I  I     + 
Sbjct: 104 TGTLPVIRRMLDPSLQALRAIPSIAWVPLFILWFGIF--------EASKITLIAVGVFFP 155

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +  ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FV A
Sbjct: 156 VYLGVAGAIASVDRKLVEVGRVFRLSRTDLARRILLPAVLPATLLALRTGLGLGFMFVAA 215

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +E++   +      G+G  +    +      I+ A++    V  L D     L RP++ W
Sbjct: 216 AELLGASE------GLGYLLLDGQQLGKPEQIVAAIIAFAAVGKLCDAALVALTRPLVRW 269

Query: 267 SNKFR 271
            +  R
Sbjct: 270 QDTVR 274



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 11/234 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R     +         L        +   +   V  G+A G        I+         
Sbjct: 13  RPEPAAKPARGRGGTALLGLVLPLGLALGWEAAVRLGLAQGRLVPPPSRILATLWALAAT 72

Query: 378 YVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +W+    ++ RV       +   I +G   G  P I   + P  Q L A P+  + PL
Sbjct: 73  GELWIHVAASLTRVAAGFACGAAAGILLGAVTGTLPVIRRMLDPSLQALRAIPSIAWVPL 132

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +     +  +       L+  G  + +   V    ++      EV   F ++     R 
Sbjct: 133 FILWFGIFEASK----ITLIAVGVFFPVYLGVAGAIASVDRKLVEVGRVFRLSRTDLARR 188

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           I+LP + P  +    T  G  +     +E+         + GLG  + +  + G
Sbjct: 189 ILLPAVLPATLLALRTGLGLGFMFVAAAELLG------ASEGLGYLLLDGQQLG 236


>gi|70727170|ref|YP_254086.1| hypothetical protein SH2171 [Staphylococcus haemolyticus JCSC1435]
 gi|68447896|dbj|BAE05480.1| opuBC [Staphylococcus haemolyticus JCSC1435]
          Length = 504

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                   K++RL  V++ I  I+Q+IP L  L   +  F            + AI A+ 
Sbjct: 38  VPLGIALTKTKRLSEVVMNIAAILQTIPSLALLGLMIPIFGIG--------RVPAIIALV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  +  +   L E ++   +   ++   + +P +MP ++  +  +M   
Sbjct: 90  VYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPMRRLTKVELPIAMPVMMAGIRTAM--- 146

Query: 204 WFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                   ++++G   +    IG+      I L I   +   IL   +    +  ++D L
Sbjct: 147 --------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNTSLILIGAIPAALLAIMFD-L 196

Query: 259 LFRPMIVWSNK 269
           + R M   S K
Sbjct: 197 ILRYMEKLSYK 207



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 12/184 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI +     +S  +   A +L   P+     L++       +   + L +  +    
Sbjct: 38  VPLGIALTKTKRLSEVVMNIAAILQTIPSLALLGLMIPIFGIGRVPAIIALVVYALL--- 94

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N   G         E A    +   R    + LP   P  + G  TA       +
Sbjct: 95  -PILRNTYTGIKEVDPSLIEAAKGIGMKPMRRLTKVELPIAMPVMMAGIRTAMVLIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++ +   G +               ++ +   +++G +      +  +  +   +    
Sbjct: 154 TLAALIGAGGLGDLIL-------LGIDRNNTSLILIGAIPAALLAIMFD-LILRYMEKLS 205

Query: 582 TRCL 585
            + L
Sbjct: 206 YKKL 209


>gi|310658731|ref|YP_003936452.1| alkanesulfonate ABC transporter membrane protein [Clostridium
           sticklandii DSM 519]
 gi|308825509|emb|CBH21547.1| alkanesulfonate transporter subunit ; membrane component of ABC
           superfamily [Clostridium sticklandii]
          Length = 251

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 95/241 (39%), Gaps = 10/241 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            +  +  +L   +  + +        P  ++  +  +     L    + +   +L  + +
Sbjct: 7   FWIFIIVMLWSIMFKLEIFNPILFPSPSAVITALGHSFLQEDLHIKLAYSISFILKGLAL 66

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L   +    +  ++ +  +   +  ++  +P L  L   +++F           + + 
Sbjct: 67  GFLVACILVIFSLNNKYIESLSDTLASMLDPLPSLAILPIVILWFGTG--------KNSI 118

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF I  S +W +  ++   +   P    E+S    ++  Q+F+ + +  ++P ++  + +
Sbjct: 119 IFIILHSVIWPVMVNIKSGIKTQPIVYRELSDLIGINKLQRFFEIQLIGALPSVITGLKV 178

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + +  W  ++ +EMI     +    GIG YI       D  A+  +++ ++ +  L D L
Sbjct: 179 AWARAWRALIGAEMIFGA--IDGKSGIGYYIFEKRVFMDTNAMYASLIVIVLLGTLVDYL 236

Query: 259 L 259
            
Sbjct: 237 F 237



 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 88/231 (38%), Gaps = 8/231 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I +   +    +  +  ++   + H   Q+ L++     I+   ++  + +  ++  
Sbjct: 15  LWSIMFKLEIFNPILFPSPSAVITALGHSFLQEDLHIKLAYSISF--ILKGLALGFLVAC 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I+     +I S     A +L   P+    P+V+        +    +  +++    W
Sbjct: 73  ILVIFSLNNKYIESLSDTLASMLDPLPSLAILPIVILWFGTGKNS----IIFIILHSVIW 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++ N+ +G    P  ++E++    I   + +  I L G  P  +TG   A   AW A I
Sbjct: 129 PVMVNIKSGIKTQPIVYRELSDLIGINKLQRFFEIQLIGALPSVITGLKVAWARAWRALI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+          +G+G YI E         +   ++++      ++   
Sbjct: 189 GAEMIFGAID--GKSGIGYYIFEKRVFMDTNAMYASLIVIVLLGTLVDYLF 237


>gi|300313548|ref|YP_003777640.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300076333|gb|ADJ65732.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 259

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 84/245 (34%), Gaps = 18/245 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYVIWLGCIT------MF 388
           N+  + +   F   V+ GV   I   WQ   +I           V + G IT       +
Sbjct: 10  NRAATTLAPWFLLLVILGVWQFICSVWQVSDFIFPSPGSILQAMVDYAGPITEHALSTFW 69

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +V   IA ++ + +G  IG  P + +   P      A P   F P++V          
Sbjct: 70  VTMVGFAIAVVVGVTLGFVIGSSPMLYAAAYPLMTAFNALPKAAFVPVLVVWFGIGAG-- 127

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L     + + I+ N+  G +    + ++V              + LP   PY+  
Sbjct: 128 --PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRMDILLKVGLPRSMPYFFA 185

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  S VSE+      +    G+G  +  +      P    G++++    +A
Sbjct: 186 SLKVAITLAFVGSTVSEM------NASNQGIGYLLVSAGSSMKMPLAFAGLVVIGAMAMA 239

Query: 569 LNRFL 573
           +    
Sbjct: 240 MYELF 244



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 88/253 (34%), Gaps = 19/253 (7%)

Query: 22  LLAFVLVIGIINIL--LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
               ++++G+   +  +  + +   P     +  +      + ++A  T    +    I+
Sbjct: 19  WFLLLVILGVWQFICSVWQVSDFIFPSPGSILQAMVDYAGPITEHALSTFWVTMVGFAIA 78

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++       +   S  L     P++    ++P   F+   VV+F              AI
Sbjct: 79  VVVGVTLGFVIGSSPMLYAAAYPLMTAFNALPKAAFVPVLVVWFGIGAGP--------AI 130

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F    + +  ++   L  +  +LE+V R            +G+P SMP    ++ ++
Sbjct: 131 LTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRMDILLKVGLPRSMPYFFASLKVA 190

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL- 258
           ++  +     SEM           GIG  +  A     +      ++ +  +     +L 
Sbjct: 191 ITLAFVGSTVSEM------NASNQGIGYLLVSAGSSMKMPLAFAGLVVIGAMAMAMYELF 244

Query: 259 --LFRPMIVWSNK 269
             + +    W+++
Sbjct: 245 AIIEKRTTGWAHR 257


>gi|320007752|gb|ADW02602.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 292

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 86/225 (38%), Gaps = 10/225 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P  + D +       +L +    +  R L   V+++        L A+ + +   +
Sbjct: 66  KLPPPGAVWDSLTDMWVQGTLLEVIWTSVSRGLFGFVMAVAIGTPLGLLVARVKVVRAAI 125

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            PIL  +QS+P + ++   V++             L A+ ++           +   +  
Sbjct: 126 GPILSGLQSLPSVAWVAPAVIWLGLNDSMMYAVILLGAVPSVAN--------GLVSGVDQ 177

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P       R+   +G +   ++ +P ++PG +  +    +  W  ++A+E+I     + 
Sbjct: 178 VPPLFLRAGRTIGATGLRGTIHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLG 237

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                G  +       D+  I  A+L +L V    D L+F P+  
Sbjct: 238 LGL--GQLLENGRNNFDMPGIFLAILLILFVGIAIDLLIFSPLER 280



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 6/194 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R +   ++A  I  P+G+ +     + + I P    L + P+  +    V  +    
Sbjct: 93  SVSRGLFGFVMAVAIGTPLGLLVARVKVVRAAIGPILSGLQSLPSVAWVAPAVIWLGL-- 150

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  +  +++ G    +   +++G    P  F     +   TG R   +I+LP   P 
Sbjct: 151 --NDSMMYAVILLGAVPSVANGLVSGVDQVPPLFLRAGRTIGATGLRGTIHIVLPAALPG 208

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           Y+ G       +W + + +E+ +           G  +         P + L +L++   
Sbjct: 209 YLAGLKQGWAFSWRSLMAAEIIASSPDLGLGL--GQLLENGRNNFDMPGIFLAILLILFV 266

Query: 566 VLALNRFLWHPLYL 579
            +A++  ++ PL  
Sbjct: 267 GIAIDLLIFSPLER 280


>gi|308177306|ref|YP_003916712.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter inner membrane subunit [Arthrobacter
           arilaitensis Re117]
 gi|307744769|emb|CBT75741.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter, inner membrane subunit [Arthrobacter
           arilaitensis Re117]
          Length = 298

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 93/237 (39%), Gaps = 19/237 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
                ++IG+I +L  G Q       +  +V + +D     + A  T   ++ A   +LL
Sbjct: 50  FAVVTILIGLIALLARGWQFMLGAV-LGLLVIVGVDQW---ENAMSTLALVIVAAFWALL 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AAKS     V+ P+LD +Q++P   +L   ++ F     G   G     IFA
Sbjct: 106 IALPLGIWAAKSDGFSQVVRPVLDFLQTMPAFVYLIPALMLFRV---GVAPGIVATIIFA 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     +         + ++  ++ E  ++F  S  +    + +P ++P ++  +   + 
Sbjct: 163 LAPGVRF-----TELGIRSVDSEVVEAGQAFGSSPGRILRQIQLPLALPTIMAGVNQVIM 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV + M+  G            +  ++   D    + A L ++ +  + D+L
Sbjct: 218 LSLSMVVIAGMVGAGGLGGD-------VISSLSRLDTALGVEAGLAVVILAMILDRL 267



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 4/181 (2%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             +    +     +   WQ +   V        +        T+  V+V    A +I +P
Sbjct: 50  FAVVTILIGLIALLARGWQFMLGAVLGLLVIVGVDQWENAMSTLALVIVAAFWALLIALP 109

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GIW       S  ++P    L   PA V+    +           +   +  +     +
Sbjct: 110 LGIWAAKSDGFSQVVRPVLDFLQTMPAFVYLIPALMLFRVGVAPGIVATIIFALAPGVRF 169

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
                  G  +  ++  E   +F  +  R  R I LP   P  + G       + +  ++
Sbjct: 170 ----TELGIRSVDSEVVEAGQAFGSSPGRILRQIQLPLALPTIMAGVNQVIMLSLSMVVI 225

Query: 524 S 524
           +
Sbjct: 226 A 226


>gi|303245568|ref|ZP_07331851.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302492831|gb|EFL52696.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 274

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 9/203 (4%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R +  + IA+   I  G+     P   +      +L    P   + P+ +      
Sbjct: 76  ASLGRWLAGLGIAATGGIAYGVLAARFPLFEAAAGQIPRLFLLVPGLAWIPVAILAFGIG 135

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++       I   V++G           A          +  ++LP   P
Sbjct: 136 PA----ATVFMIAATAFAPIAVGVLSGIRGVDPALVRAAGMLGAGRNALFFRVLLPAALP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +TG    CG  W   + +E+          TGLG  I ++     +      ++I+C 
Sbjct: 192 MVITGLRIGCGTGWRVLVAAEMVVGAG-----TGLGYSIIQARWTLDYLSSFACLVIICA 246

Query: 565 FVLALNRFLWHPLYLYGTRCLRL 587
               +   L   L     R   L
Sbjct: 247 IGFFVEGVLLGRLEAVTVRRWSL 269



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 95/267 (35%), Gaps = 20/267 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVD-------IVPITLDV 58
            L P   R     +  L   + V  I+ I +  +++   P  +         +    L+ 
Sbjct: 8   RLCPGSLRGFLVALAGLFVLLAVWQIVAIAISTLRDVPFPTPLQTGRRLLELLAGARLNG 67

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H +  +   +  R L+ + I+      Y  LAA+          I  +   +P L ++  
Sbjct: 68  HDILTHVRASLGRWLAGLGIAATGGIAYGVLAARFPLFEAAAGQIPRLFLLVPGLAWIPV 127

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F             A +F I  +    +   +   +  +   L   +         
Sbjct: 128 AILAFGIG--------PAATVFMIAATAFAPIAVGVLSGIRGVDPALVRAAGMLGAGRNA 179

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P ++P ++  + +    GW  +VA+EM+V   T     G+G  I  A    D 
Sbjct: 180 LFFRVLLPAALPMVITGLRIGCGTGWRVLVAAEMVVGAGT-----GLGYSIIQARWTLDY 234

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
           L+    ++ +  + F  + +L   +  
Sbjct: 235 LSSFACLVIICAIGFFVEGVLLGRLEA 261


>gi|206562978|ref|YP_002233741.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198039018|emb|CAR54981.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 271

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 86/235 (36%), Gaps = 13/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L A      + +  L        P D++          +L +  S +  R      I   
Sbjct: 31  LAALACWWAVASAHLVKSGLLVGPADVLHTAWAQAASGALGRALSASLAREACGFAIGAT 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR    ++ P  D  + I +  ++    V+F      KV+   LAA+  
Sbjct: 91  GGLLLGAALGLSRIAARMVGPSFDTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALLP 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +PR   +V+R+ R S  Q   ++ +P ++P +   + + + 
Sbjct: 151 VAAHTC--------DGIHAVPRAYVDVARALRYSRLQLIRHVILPAALPSIFTGLYLGLI 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             W   + +E ++V  +     GIG+ +    ++  +  +L+ ++ +    +  +
Sbjct: 203 YSWLATLGAEYLLVAGS-----GIGNTLIDGSEQFRMDLVLFGIIVVGVTGWALN 252



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 86/245 (35%), Gaps = 21/245 (8%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT--------- 386
           +R+       +   +  +A   A  S   + +       DVL+  W    +         
Sbjct: 17  RRLHAPDWRGFVLPLAALACWWAVASAHLVKSGLLVGPADVLHTAWAQAASGALGRALSA 76

Query: 387 -MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
            + R      I +   + +G  +G     +  + P            + PL+        
Sbjct: 77  SLAREACGFAIGATGGLLLGAALGLSRIAARMVGPSFDTFKQISLFAWIPLISVWFGLGD 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   ++LS          +  +   G  A P  + +VA +   +  +  R++ILP   P 
Sbjct: 137 VAKVVFLS----LAALLPVAAHTCDGIHAVPRAYVDVARALRYSRLQLIRHVILPAALPS 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG       +W A++ +E        +  +G+G  + + +E+     V+ G++++   
Sbjct: 193 IFTGLYLGLIYSWLATLGAEYLL-----VAGSGIGNTLIDGSEQFRMDLVLFGIIVVGVT 247

Query: 566 VLALN 570
             ALN
Sbjct: 248 GWALN 252


>gi|169827830|ref|YP_001697988.1| glycine betaine/carnitine/choline-binding protein [Lysinibacillus
           sphaericus C3-41]
 gi|168992318|gb|ACA39858.1| Glycine betaine/carnitine/choline-binding protein precursor
           (Osmoprotectant-binding protein) [Lysinibacillus
           sphaericus C3-41]
          Length = 499

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 77/206 (37%), Gaps = 23/206 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L             A+  +++            +++   ++ I  ++Q+IP L  L   
Sbjct: 8   QLLAALLEHIQISFIALFFAIIIAIPLGIYLTNKKKIAETIIGISAVLQTIPSLALLGLL 67

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F           ++ AI A+    +  +  + Y  +  +   L+E + +  ++  ++
Sbjct: 68  IPLFGIG--------KVPAIIALVVYALLPILRNTYTGIKEVDPSLKEAALAMGMNTPKR 119

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIKE 235
              + +P ++P ++  +  +M           +++VG       I   G+G  I L I  
Sbjct: 120 LLKVELPLALPVIMAGIRTAM-----------VLIVGTATLAALIGAGGLGDIILLGIDR 168

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
            +   I+   +    +  ++D LL R
Sbjct: 169 NNTALIILGAVPAAILALIFDILLKR 194



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 12/194 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A II IP+GI++  +  I+  I   + +L   P+     L++           +
Sbjct: 21  FIALFFAIIIAIPLGIYLTNKKKIAETIIGISAVLQTIPSLALLGLLIPLFGIG----KV 76

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G        KE A +  +   +    + LP   P  + G 
Sbjct: 77  PAIIALVVYALLPILRNTYTGIKEVDPSLKEAALAMGMNTPKRLLKVELPLALPVIMAGI 136

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG  I    ++ +   ++LG +      L  +
Sbjct: 137 RTAMVLIVGTATLAALIGAG-------GLGDIILLGIDRNNTALIILGAVPAAILALIFD 189

Query: 571 RFLWHPLYLYGTRC 584
             L   L     R 
Sbjct: 190 ILL-KRLESLSFRK 202


>gi|306824664|ref|ZP_07458008.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432875|gb|EFM35847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 506

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|312116249|ref|YP_004013845.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221378|gb|ADP72746.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 300

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A  +V  +    L+           +          +LP+    +   +L+   I +L
Sbjct: 49  LIALAVVWELYARHLNNDLLFPTFFQTLTAFFNETANGTLPRRVWVSLKVLLTGYGIGIL 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  LA  +R    +L  +  +   +P +  L   +++F             + +F 
Sbjct: 109 IAACITVLALVTRIGEDLLETLTAMFNPLPAIALLPLALIWFGLG--------TQSIVFV 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  +      ++   L  V +++ L        + +P ++P L+  + +  +
Sbjct: 161 LVHSVLWPVALNANSGFKSVSPTLRMVGKNYGLGLLSTVRQILIPAALPSLITGLKVGWA 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +       G +I     + ++  +   + T++ +    + L+FR
Sbjct: 221 FAWRTLIAAELVFGVSSGSGGL--GWFIFENKNQLEIANVFAGLFTVILIGLAVEGLIFR 278

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 279 ALEERTVR 286



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 81/256 (31%), Gaps = 20/256 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
             +  +   +  +A+ + W+     +N+       +             T+ R V + + 
Sbjct: 38  WGNGAFRKTIILIALAVVWELYARHLNNDLLFPTFFQTLTAFFNETANGTLPRRVWVSLK 97

Query: 397 ASIIWIPVGIWIGFRPHI--------SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    +GI I     +           ++    +    PA    PL +        + 
Sbjct: 98  VLLTGYGIGILIAACITVLALVTRIGEDLLETLTAMFNPLPAIALLPLALIWFGLGTQS- 156

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +  +++    W +  N  +G  +     + V  ++ +      R I++P   P  +T
Sbjct: 157 ---IVFVLVHSVLWPVALNANSGFKSVSPTLRMVGKNYGLGLLSTVRQILIPAALPSLIT 213

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       AW   I +E+             G +I E+  +     V  G+  +    LA
Sbjct: 214 GLKVGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNQLEIANVFAGLFTVILIGLA 271

Query: 569 LNRFLWHPLYLYGTRC 584
           +   ++  L     R 
Sbjct: 272 VEGLIFRALEERTVRR 287


>gi|269125624|ref|YP_003298994.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268310582|gb|ACY96956.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 287

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 91/275 (33%), Gaps = 22/275 (8%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +  K     +  +R+H  +        +  +  L +     V  +A      S+G++   
Sbjct: 6   DAAKARPLPVRTLRWHPAQRRSARPRRRGRALDLAVRALVPVALLAAWQLVASLGWVDPQ 65

Query: 371 FTYQDVLYVIWLGC------------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                ++ V                 +++ R  + + I     + +G+  G         
Sbjct: 66  VLPGPLVIVDAYAELLRTGELQAALPVSLQRAGIGLAIGGGTGLLLGVAAGLWAAAERLY 125

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
               Q+L   P     PL +        +       L++  + + +  N   G       
Sbjct: 126 DAPLQMLRTIPFIAMVPLFIVWFGIGEESK----IALIVGASIFPVYLNTYHGIRGIDRR 181

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E+A +F ++  +    I++P   P  + G   A G A  A + +E  +        +G
Sbjct: 182 LIELAQTFELSRRQVIGLIVVPLAMPQILVGLRYAAGTALLALVAAEQIN------TVSG 235

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G  +  + +      ++ G+L+     + ++  +
Sbjct: 236 IGYILNNANQNQRTDIIIAGILVYAALGIVVDVLM 270



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +    ++  L     +    P  IVD     L    L      +  R    + I   
Sbjct: 47  VALLAAWQLVASLGWVDPQVLPGPLVIVDAYAELLRTGELQAALPVSLQRAGIGLAIGGG 106

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    A        +    L ++++IP +  +   +V+F           E + I  
Sbjct: 107 TGLLLGVAAGLWAAAERLYDAPLQMLRTIPFIAMVPLFIVWFGIG--------EESKIAL 158

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + ++ +  + Y  +  I R L E++++F LS  Q    + VP +MP ++  +  +  
Sbjct: 159 IVGASIFPVYLNTYHGIRGIDRRLIELAQTFELSRRQVIGLIVVPLAMPQILVGLRYAAG 218

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                +VA+E I        + GIG  +  A + Q    I+  +L    +  + D   +L
Sbjct: 219 TALLALVAAEQI------NTVSGIGYILNNANQNQRTDIIIAGILVYAALGIVVDVLMRL 272

Query: 259 LFRPMIVW 266
           L + ++ W
Sbjct: 273 LEKALLPW 280


>gi|239629369|ref|ZP_04672400.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239528055|gb|EEQ67056.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 509

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 20/188 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++ +L+     A      +R   +   I  I Q+IP L  L   + +          
Sbjct: 27  LISLLFALIIALPLALAVVHHQRTAGIFTQIAGIFQTIPSLAVLGLLIPFVGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  S    + +I   LEE + +F ++  +K + + +P +MP +
Sbjct: 81  --TIPAITALVIYAILPIFSSTLAGIGSIDDALEEAADAFGMNRREKIFRVELPLAMPTI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLT 247
           V  +  ++      ++ +  +     +I   G+G +I L I   +     + AI  A+L 
Sbjct: 139 VTGIRQAI----VMIIGTGTLAA---LIGAGGLGDFILLGIDRNNNAMTLIGAIASALLA 191

Query: 248 MLGVIFLY 255
           ++    +Y
Sbjct: 192 IIFSGGIY 199



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A II +P+ + +      +      A +    P+     L++  V    +    
Sbjct: 27  LISLLFALIIALPLALAVVHHQRTAGIFTQIAGIFQTIPSLAVLGLLIPFVGIGTIPAIT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  I      I  + +AG  +  +  +E A +F +        + LP   P  VTG 
Sbjct: 87  ALVIYAIL----PIFSSTLAGIGSIDDALEEAADAFGMNRREKIFRVELPLAMPTIVTGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A         ++ +   G       GLG +I    ++ +    ++G +      +  
Sbjct: 143 RQAIVMIIGTGTLAALIGAG-------GLGDFILLGIDRNNNAMTLIGAIASALLAIIF 194


>gi|108797085|ref|YP_637282.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119866170|ref|YP_936122.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|108767504|gb|ABG06226.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119692259|gb|ABL89332.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
          Length = 286

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L+ +VI +    +   +      +  VL P L  ++++P L +    V
Sbjct: 88  LVEHLYMTLRRVLAGVVIGVALGVLLGLVMGSVSWVRSVLEPWLTFLRALPPLAYFFLLV 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L E +R+   S  +  
Sbjct: 148 IWLGIDEAPKITLLALAALPPAAVATTAAVLAAPVG--------LTEAARALGASRGEVI 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P     + +++   +  VVA+E+         LPG+G  +  A    +   
Sbjct: 200 RDVVVPSALPETFTGIRLAVGMAYSSVVAAELF------NGLPGVGGLVKDASNYNNTPV 253

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  +  +     + D LL    R    W  K
Sbjct: 254 VLVGIFAIGISGLIIDGLLRTIERRSTPWIGK 285



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV+  ++I   + + +G+ +G    + S ++P+   L A P   +F L+V  +  
Sbjct: 93  YMTLRRVLAGVVIGVALGVLLGLVMGSVSWVRSVLEPWLTFLRALPPLAYFFLLVIWLGI 152

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L+L  +            A   A P    E A +   +     R +++P   
Sbjct: 153 DEAPKITLLALAALPPAA----VATTAAVLAAPVGLTEAARALGASRGEVIRDVVVPSAL 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A G A+++ + +E+ +         G+G  + +++   + P V++G+  + 
Sbjct: 209 PETFTGIRLAVGMAYSSVVAAELFNG------LPGVGGLVKDASNYNNTPVVLVGIFAIG 262

Query: 564 CFVLALNRFL 573
              L ++  L
Sbjct: 263 ISGLIIDGLL 272


>gi|296159218|ref|ZP_06842044.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890477|gb|EFG70269.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 353

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 22/294 (7%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           +     +     F  L   +        V     P N   + + +  +++  + W   + 
Sbjct: 55  WPSLDDWPYTKTFIALKLVLAAFAVATAVAGRRDPSNRKAVTATRISAWLAAMPWLLALA 114

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIW 401
                    +         +      +                 +   +    ++ +I  
Sbjct: 115 LGVSVWEAVTAQLEWLPRPFFAPPQALIGVYAEDYPRLGTSVVHSFGLLAYGYLLGAIAG 174

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +G+ IG+   +S  + P  +L+   PA  + PL                  L+   T 
Sbjct: 175 FAIGVSIGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFFFPSSFS----ASVFLIALATA 230

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +     +G +   + + ++A +           + +P   P    G     G +++  
Sbjct: 231 FPVAVLTWSGVAGVNSAYYDIARTLGARPSFLILRVAIPAALPSVFVGLFMGLGASFSVL 290

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           IV+E+           GLG Y+  +    ++  +   +L+M      L   L+ 
Sbjct: 291 IVAEMMG------VKAGLGWYLQWAQGWAAYSNMYAALLVMALMCSGLITLLFR 338



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 85/252 (33%), Gaps = 22/252 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLRMLSAMVI 78
              L +G+        Q   +PR         +     D   L      +   +    ++
Sbjct: 110 LLALALGVSVWEAVTAQLEWLPRPFFAPPQALIGVYAEDYPRLGTSVVHSFGLLAYGYLL 169

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +  F        S+ +   + P+L ++  +P   +L     +           +  A+
Sbjct: 170 GAIAGFAIGVSIGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFF--------FPSSFSAS 221

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  +  +     +++R+           + +P ++P +   + M
Sbjct: 222 VFLIALATAFPVAVLTWSGVAGVNSAYYDIARTLGARPSFLILRVAIPAALPSVFVGLFM 281

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  ++ +EM+ V        G+G Y+  A        +  A+L M  +      L
Sbjct: 282 GLGASFSVLIVAEMMGVKA------GLGWYLQWAQGWAAYSNMYAALLVMALMCSGLITL 335

Query: 259 LFR---PMIVWS 267
           LFR    ++ W 
Sbjct: 336 LFRVRDRLLAWQ 347


>gi|170749739|ref|YP_001755999.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170656261|gb|ACB25316.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 259

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 17/239 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
               +    P  I   +        L  +   T +R+    +       +   L A    
Sbjct: 32  AASGRLLPPPSRIAATLWRLAVSGDLWMHVEATLVRVGLGFLCGAAAGILAGALVATVPP 91

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  +L P L  ++++P L ++   +++F  L   KV+   +   F ++          + 
Sbjct: 92  LRWLLDPSLQALRAVPSLAWVPLFILWFGILETPKVLLIAVGVFFPVYV--------GVS 143

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            ++ ++ R L EV R FRLS       + +P  +P  +  +   +  G+ FVVA+E++  
Sbjct: 144 GAIASVDRKLVEVGRIFRLSRLALARRILLPAVLPATLVGLRTGLGLGFLFVVAAELMGA 203

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
            +      G+G  +    +      I+ A++    V    D     L  P+  W +  R
Sbjct: 204 SE------GLGYLLVDGQQFSKPDQIVAAIIAFALVGKAADMALVALTGPLTRWQDTVR 256



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 77/226 (34%), Gaps = 11/226 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIW 407
             V  G A G        I        V   +W+    T+ RV +  +  +   I  G  
Sbjct: 26  IAVASGAASGRLLPPPSRIAATLWRLAVSGDLWMHVEATLVRVGLGFLCGAAAGILAGAL 85

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +   P +   + P  Q L A P+  + PL +               LL+  G  + +   
Sbjct: 86  VATVPPLRWLLDPSLQALRAVPSLAWVPLFILWFGILETPK----VLLIAVGVFFPVYVG 141

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V    ++      EV   F ++     R I+LP + P  + G  T  G  +   + +E+ 
Sbjct: 142 VSGAIASVDRKLVEVGRIFRLSRLALARRILLPAVLPATLVGLRTGLGLGFLFVVAAELM 201

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   + GLG  + +  +     ++V  ++       A +  L
Sbjct: 202 G------ASEGLGYLLVDGQQFSKPDQIVAAIIAFALVGKAADMAL 241


>gi|167590828|ref|ZP_02383216.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 255

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++     T+  + V           +G+ IG+   +   + P  ++L   PA    
Sbjct: 50  DWPRLLGSAGNTLKLLGVGFAYGVAAGFALGVSIGWSRRVGYWVHPLLRVLGPVPATALL 109

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        H       + L+   T + +     +G ++    + +VA +         
Sbjct: 110 PLTFYFFPSSHS----AATFLIALSTGFPVAVLTWSGVASVDKQYYDVARTLGANARFLV 165

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P+   G       ++   +V+E+          +GLG Y++ +    S+  
Sbjct: 166 LRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQGWASYVN 219

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +L+M      L   L+
Sbjct: 220 MYAALLVMALLFSGLIALLF 239



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 92/250 (36%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I          P        I +   D   L   A  T  
Sbjct: 4   RVQPAGPWLVAAPLVLAAWEIATAKTGWLPTPFFAPPQALIEVYVDDWPRLLGSAGNTLK 63

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       +   F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 64  LLGVGFAYGVAAGFALGVSIGWSRRVGYWVHPLLRVLGPVPATALLPLTFYFF------- 116

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  S  + +    +  + ++ +   +V+R+   +       + +P ++P
Sbjct: 117 -PSSHSAATFLIALSTGFPVAVLTWSGVASVDKQYYDVARTLGANARFLVLRVAIPAALP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A+L M  
Sbjct: 176 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALLVMAL 229

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 230 LFSGLIALLF 239


>gi|222153015|ref|YP_002562192.1| glycine betaine ABC transporter [Streptococcus uberis 0140J]
 gi|222113828|emb|CAR41915.1| ABC-type glycine betaine transport system protein [Streptococcus
           uberis 0140J]
          Length = 508

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 75/175 (42%), Gaps = 15/175 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A+L  KS+R    ++ +  + Q+IP L  L         L+   +    + A+ A+  
Sbjct: 39  PLASLLTKSKRWSDFVLQLTGVFQTIPSLALL--------GLFIPLMGIGTIPAVSALVI 90

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V+ +  +    L  I   L E   +F +S W++     +P +MP ++  +  S     
Sbjct: 91  YAVFPIIQNTITGLNGIDPSLVEAGTAFGMSKWERLKTFEIPIAMPVIMSGVRTSA---- 146

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++ +  +    ++I   G+G++I L I   +   IL   ++   +  L++ +L
Sbjct: 147 VMIIGTATLA---SLIGAGGLGTFILLGIDRNNTSLILIGAISSALLAILFNSIL 198



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+   +      S  +     +    P+     L +  +    +     +S L+I+   +
Sbjct: 39  PLASLLTKSKRWSDFVLQLTGVFQTIPSLALLGLFIPLMGIGTIP---AVSALVIY-AVF 94

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ N I G +       E  ++F ++ W   +   +P   P  ++G  T+       + 
Sbjct: 95  PIIQNTITGLNGIDPSLVEAGTAFGMSKWERLKTFEIPIAMPVIMSGVRTSAVMIIGTAT 154

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++ +   G       GLG +I    ++ +   +++G +      +  N  L
Sbjct: 155 LASLIGAG-------GLGTFILLGIDRNNTSLILIGAISSALLAILFNSIL 198


>gi|315613712|ref|ZP_07888619.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314403|gb|EFU62448.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 506

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFLL 198



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|269215401|ref|ZP_06159255.1| putative ABC transporter transmembrane subunit, permease [Slackia
           exigua ATCC 700122]
 gi|269130888|gb|EEZ61963.1| putative ABC transporter transmembrane subunit, permease [Slackia
           exigua ATCC 700122]
          Length = 390

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 85/236 (36%), Gaps = 15/236 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIG----YIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIA 397
           ++  FW  V  G+ + +  + +      ++       V    WL C  +  R+    +++
Sbjct: 139 LVIAFWILVWQGLDLAMNNRLVLAGPIRVMQALAEGIVEPGFWLSCSASFARIAAGFLLS 198

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + I + +       +   ++P   LL   P      +++  V        +    L  
Sbjct: 199 FFVGISLALLSHHARIVRDFVEPVISLLRTIPVVSIIIMLLIWVG-----NQMLTVYLSF 253

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I  N++AG         E+A  + +  WR + Y+  P   P+  +    + G +
Sbjct: 254 LIVLPIIYTNMLAGLENVDPRMLEMARCYRLGWWRTFMYVYRPAFMPFLKSSCRLSLGMS 313

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           W A I++EV +          +G  +A++    + P++    +++        +  
Sbjct: 314 WKAGIMAEVLATPKPS-----IGKEMAQARTFLATPDLFAWTVVVMILSWGFEKAF 364



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 101/245 (41%), Gaps = 21/245 (8%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV   +++ ++       P  ++  +   +         S +  R+ +  ++S      
Sbjct: 145 ILVWQGLDLAMNNRLVLAGPIRVMQALAEGIVEPGFWLSCSASFARIAAGFLLSFFVGIS 204

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A L+  +R +   + P++ ++++IP++  +   +++         +G ++  ++  F  
Sbjct: 205 LALLSHHARIVRDFVEPVISLLRTIPVVSIIIMLLIW---------VGNQMLTVYLSFLI 255

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  +M   L N+   + E++R +RL  W+ F Y+  P  MP L  +  +S+   W 
Sbjct: 256 VLPIIYTNMLAGLENVDPRMLEMARCYRLGWWRTFMYVYRPAFMPFLKSSCRLSLGMSWK 315

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLG------VIFLYDQL 258
             + +E++       P P IG  +A A        +  + ++ M+               
Sbjct: 316 AGIMAEVLAT-----PKPSIGKEMAQARTFLATPDLFAWTVVVMILSWGFEKAFMALLDA 370

Query: 259 LFRPM 263
           L RP+
Sbjct: 371 LGRPL 375


>gi|308235051|ref|ZP_07665788.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114601|ref|YP_003985822.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
 gi|310946095|gb|ADP38799.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 265

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 89/240 (37%), Gaps = 10/240 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           + F+ L +      +L +++   +           I  I       +   ++    I++F
Sbjct: 14  KAFISLKAWLSTIAILFLWFLITLTPAENRALPSPIEVIKAFVDLNNEGILLPSLAISIF 73

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RVV  +++     +P GI  G      S I   + +L + P     PL++  +       
Sbjct: 74  RVVAGLLLGIAFALPSGIISGGSKIGESVINKPSHMLRSIPFPALAPLLIIFLGV----D 129

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   +L+  G    +  N+  G         E+A ++++     +  I + G    ++T
Sbjct: 130 EMMKIMLIALGVFGPMYVNIRDGVRNIDPKLIELAKAYNVKKSTVFTTIFMRGTLANFMT 189

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +   AW A +  E  +       + G+G  ++ + +     +++  +++     L 
Sbjct: 190 GLRFSISVAWVALVTCETVN------SSIGIGYILSRAQQFFRPDQMMACIILYAIAGLG 243



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 84/235 (35%), Gaps = 14/235 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               +A + +  +I +     +    P +++       +   L    + +  R+++ +++
Sbjct: 22  WLSTIAILFLWFLITLTPAENRALPSPIEVIKAFVDLNNEGILLPSLAISIFRVVAGLLL 81

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            + F      ++  S+    V+     +++SIP        +++            E+  
Sbjct: 82  GIAFALPSGIISGGSKIGESVINKPSHMLRSIPFPALAPLLIIFLGVD--------EMMK 133

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I       M  ++   + NI   L E+++++ +     F  + +  ++   +  +  
Sbjct: 134 IMLIALGVFGPMYVNIRDGVRNIDPKLIELAKAYNVKKSTVFTTIFMRGTLANFMTGLRF 193

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           S+S  W  +V  E +          GIG  ++ A +      ++  ++       
Sbjct: 194 SISVAWVALVTCETVNSSI------GIGYILSRAQQFFRPDQMMACIILYAIAGL 242


>gi|146283267|ref|YP_001173420.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
 gi|145571472|gb|ABP80578.1| sulfonate ABC transporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
          Length = 253

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 102/230 (44%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++     L    LP++   T  R+L A  +++    +      +SR    +L 
Sbjct: 31  LPTPAAVLETFWQALQSGELPEHLLVTLRRVLIAFSLAMALGTLLGVWMGRSRLANALLD 90

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L +  ++P L  +    V+F  +          AA+ A+  ++V N+  ++ +   ++
Sbjct: 91  PLLVLFLNLPALVTIILLYVWFGLVE--------AAAVLAVVVNKVPNVAVTVREGARSL 142

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              LE+++R +    WQ+  ++ +P   P L+      ++  W  V+  E++        
Sbjct: 143 DPKLEQMARVYGFGRWQRIAHVWLPQLFPYLMAATRGGLALIWKIVLVVELLG------R 196

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  + +A +  D+ +IL   L  + V+ L +  L +P+   ++ +R
Sbjct: 197 SDGIGFQLHMAFQVFDVASILAYSLAFIAVVQLIELALLQPLERRASAWR 246



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ RV++   +A  +   +G+W+G     ++ + P   L    PA V   L+      
Sbjct: 55  LVTLRRVLIAFSLAMALGTLLGVWMGRSRLANALLDPLLVLFLNLPALVTIILLYVWFGL 114

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L + +         +   V  GA +     +++A  +    W+   ++ LP +F
Sbjct: 115 VEAAAVLAVVV----NKVPNVAVTVREGARSLDPKLEQMARVYGFGRWQRIAHVWLPQLF 170

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY +          W   +V E+        R+ G+G  +  + +      ++   L   
Sbjct: 171 PYLMAATRGGLALIWKIVLVVELLG------RSDGIGFQLHMAFQVFDVASILAYSLAFI 224

Query: 564 CFVLALNRFLWHPLYLYG 581
             V  +   L  PL    
Sbjct: 225 AVVQLIELALLQPLERRA 242


>gi|237803287|ref|YP_002888481.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT]
 gi|231274521|emb|CAX11317.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT]
          Length = 589

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLTPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPATQGLLHPLCVLVQCLPMFTLTPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|257789861|ref|YP_003180467.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Eggerthella lenta DSM 2243]
 gi|257473758|gb|ACV54078.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Eggerthella lenta DSM 2243]
          Length = 528

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ ++ L         A  RR    ++ +++ + +IP +    F +       P    
Sbjct: 29  LISIALAALIGLSLGIAIATWRRGAKPVLALVNFVYTIPSIALFGFLIPITGIGDP---- 84

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + Y  L  I   + E +R    +  Q  + + +P + P +
Sbjct: 85  ----TAIVALTVYALLPMVRNTYTGLTTIDPAIIEAARGMGSTDRQLLYRIELPLAAPVI 140

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +             +  +    T I   G+G  I   I   +L   L   + +  + 
Sbjct: 141 MSGIR-------NMATMTIALAGIATFIGAGGLGVAIFRGITTYNLAMTLAGSVLIALLA 193

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 194 IVVDLLL 200



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 16/196 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I +A++I + +GI I      +  +      +   P+   F  ++           +
Sbjct: 29  LISIALAALIGLSLGIAIATWRRGAKPVLALVNFVYTIPSIALFGFLIPITGIGDPTAIV 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G +       E A     T  +    I LP   P  ++G 
Sbjct: 89  ALTVYALL----PMVRNTYTGLTTIDPAIIEAARGMGSTDRQLLYRIELPLAAPVIMSGI 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N + ++   +     +   GLG  I       +    + G +++    + ++
Sbjct: 145 R-------NMATMTIALAGIATFIGAGGLGVAIFRGITTYNLAMTLAGSVLIALLAIVVD 197

Query: 571 RFLWHPLYLYGTRCLR 586
             L         +  R
Sbjct: 198 LLL-----GLAEKSTR 208


>gi|239816838|ref|YP_002945748.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239803415|gb|ACS20482.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 360

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 82/258 (31%), Gaps = 11/258 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +LG        +            +L   W      +A+              TY D   
Sbjct: 98  SLGPRAGRVAHSLRPAGPWLVALPVLFAIWEISTAKLALLPTPFFAPPQSLVETYIDDWR 157

Query: 379 VIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +    +   R++    ++ ++     G+ IG+       + P  + +   PA+   PL 
Sbjct: 158 RLGESLLHSTRLLAHGFVLGALAGFLTGVTIGWSRIAGYWVHPVLRFVGPVPASALLPLA 217

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                  +         L+   T + +     +G +    ++ +VA +   +       +
Sbjct: 218 FFFFPSSYA----AAVFLIALATGFPVAVLTWSGVAGVNRNYYDVARTMGASERFLVLRV 273

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P    G     G A++  + +E+           GLG Y++ +    S+  +  
Sbjct: 274 AIPAALPQVFVGLFMGLGAAFSVLVTAEMMG------VKAGLGFYLSWAQGWASYSNMYA 327

Query: 558 GVLIMCCFVLALNRFLWH 575
            +++M      L   L+ 
Sbjct: 328 ALIVMAVLCSGLITLLFK 345



 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 17/258 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQ 63
               ++  + P    L+A  ++  I  I    +     P        +     D   L +
Sbjct: 102 RAGRVAHSLRPAGPWLVALPVLFAIWEISTAKLALLPTPFFAPPQSLVETYIDDWRRLGE 161

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +T  +    V+  L  F+       SR  G  + P+L  +  +P    L     +F
Sbjct: 162 SLLHSTRLLAHGFVLGALAGFLTGVTIGWSRIAGYWVHPVLRFVGPVPASALLPLAFFFF 221

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +  AA+F I  +  + +    +  +  + R+  +V+R+   S       +
Sbjct: 222 --------PSSYAAAVFLIALATGFPVAVLTWSGVAGVNRNYYDVARTMGASERFLVLRV 273

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + M +   +  +V +EM+ V        G+G Y++ A        +  
Sbjct: 274 AIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKA------GLGFYLSWAQGWASYSNMYA 327

Query: 244 AMLTMLGVIFLYDQLLFR 261
           A++ M  +      LLF+
Sbjct: 328 ALIVMAVLCSGLITLLFK 345


>gi|33591795|ref|NP_879439.1| ABC transporter, permease component [Bordetella pertussis Tohama I]
 gi|33594997|ref|NP_882640.1| ABC transporter, permease component [Bordetella parapertussis
           12822]
 gi|33565073|emb|CAE40024.1| ABC transporter, permease component [Bordetella parapertussis]
 gi|33571438|emb|CAE44921.1| ABC transporter, permease component [Bordetella pertussis Tohama I]
 gi|332381212|gb|AEE66059.1| ABC transporter, permease component [Bordetella pertussis CS]
          Length = 257

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +  +       T+   V    +A +  + + + +       S + P    L + P    
Sbjct: 51  AEWRWYADQAWYTLMTTVAGFAVAVVGGVLIAVMLVSSRWCESFLYPLIVALNSVPKVAI 110

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V  +      P + ++ L+     + ++ + + G  + P D  ++      +   +
Sbjct: 111 APLFVIWLGTG-AEPKIAIAFLI---AVFAVIVDTVHGLKSVPQDVLDLGRVLKGSRRDF 166

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + LPG  P  VTG   A   A   +IV E  S         GLG  I  +       
Sbjct: 167 FFKVRLPGALPSIVTGMKVAVSLALVGAIVGEFVS------SQRGLGYVIMSAQGTFDTV 220

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V   + ++    +AL   L
Sbjct: 221 RVFAALTVLAVMGMALFALL 240



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  F+L+   +   L  ++   +P      + +  +       A  T +  ++   ++++
Sbjct: 18  LAVFLLLWEGLGRALE-VRPIMLPLPSQIALELAAEWRWYADQAWYTLMTTVAGFAVAVV 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A +   SR     L P++  + S+P +      V++       K+  A L A+FA
Sbjct: 77  GGVLIAVMLVSSRWCESFLYPLIVALNSVPKVAIAPLFVIWLGTGAEPKIAIAFLIAVFA 136

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    V          L ++P+D+ ++ R  + S    F+ + +P ++P +V  M +++S
Sbjct: 137 VIVDTV--------HGLKSVPQDVLDLGRVLKGSRRDFFFKVRLPGALPSIVTGMKVAVS 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +          G+G  I  A    D + +  A+  +  +      LL
Sbjct: 189 LALVGAIVGEFVS------SQRGLGYVIMSAQGTFDTVRVFAALTVLAVMGMALFALL 240


>gi|309785992|ref|ZP_07680621.1| taurine transport system permease protein tauC [Shigella
           dysenteriae 1617]
 gi|308926103|gb|EFP71581.1| taurine transport system permease protein tauC [Shigella
           dysenteriae 1617]
          Length = 232

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 10  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 69

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 70  MDATLWQHLAASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYL 129

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V        +      LL+       +  + +AG  +        A S   +  +  
Sbjct: 130 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 185

Query: 495 RYIILPGIFPYY 506
            ++ILPG  P  
Sbjct: 186 WFVILPGALPEI 197



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 71/171 (41%), Gaps = 8/171 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ ++L
Sbjct: 35  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F           E + I  
Sbjct: 95  IGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 146

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           I+ +    +  S    + +  +     ++S   S  Q  W++ +P ++P +
Sbjct: 147 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEI 197


>gi|254453772|ref|ZP_05067209.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198268178|gb|EDY92448.1| glycine betaine/proline ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 687

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 19/238 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +   L+  ++   + G +   +P   +  + IT     L + +  +      A+ + +L
Sbjct: 461 WVTVFLLTTLLAYQVGGPRLALLPAGAIGFLLIT----GLWEISMISVYLCTVAVFLCIL 516

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    AA S  +  ++ PI DI+Q++P    L   ++ F           +  A+ A
Sbjct: 517 LGGLIGIWAATSDTVSRIIRPINDILQTLPQFVLLIPALMLFQVG--------DFTALLA 568

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  M     Q L  +P  L +  ++   S WQ FW + +P S+P ++  +  ++ 
Sbjct: 569 IIAYAIVPMIRYTEQGLRAVPSTLVDAGKACGCSAWQLFWDVRLPISLPQILIGINQTIL 628

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +V + ++          G+G  I +A+ + D  A + A   M  +    D++L
Sbjct: 629 YVLGMLVIAALV-------GTTGLGQAIYVALSQADAGAGIVAGFGMALIAMTADRIL 679



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 84/194 (43%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L A+ ++++  F       +S+R    ++P+LD+MQ+IP   +L   ++ F 
Sbjct: 130 AMNTLSLVLVALPLAVMIGFGIGYTGFRSKRACQFILPMLDLMQTIPAFAYLIPILLLFG 189

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V+G   + +FA+       M  +       IP  + E +     S +Q+F +  
Sbjct: 190 F---GPVVGLIASVVFAVP-----PMVRNTMLGFEQIPPAISESALMSGCSRFQQFRWAE 241

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P ++  +  +       V+ + +I   +       IG  +  A+++      L +
Sbjct: 242 FPSALPQMLIGVNQTTMATLSMVIIAAIIGGFED------IGWEVLSAMRKAQFGQSLLS 295

Query: 245 MLTMLGVIFLYDQL 258
              ++ +  L D++
Sbjct: 296 GAVIVVMAILLDRV 309



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 77/237 (32%), Gaps = 16/237 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           +      +  V  +   +A+Q  G  +       + +++  G      I+++   V + +
Sbjct: 454 FGATGLPWVTVFLLTTLLAYQVGGPRLALLPAGAIGFLLITGLWEISMISVYLCTVAVFL 513

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             ++   +GIW      +S  I+P   +L   P  V     +           L +    
Sbjct: 514 CILLGGLIGIWAATSDTVSRIIRPINDILQTLPQFVLLIPALMLFQVGDFTALLAIIAYA 573

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I     Y       G  A P+   +   +   + W+ +  + LP   P  + G       
Sbjct: 574 IVPMIRY----TEQGLRAVPSTLVDAGKACGCSAWQLFWDVRLPISLPQILIGINQTILY 629

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +++ +         TTGLG  I  +  +      ++    M    +  +R L
Sbjct: 630 VLGMLVIAALVG-------TTGLGQAIYVALSQADAGAGIVAGFGMALIAMTADRIL 679



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 15/237 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V  +L    + V       IAWQ  G  +   T    LY++  G       T+  V+V +
Sbjct: 82  VQTLLIGAPWLVSISFFTLIAWQGGGRRLAVTTAALSLYILASGYWVPAMNTLSLVLVAL 141

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A +I   +G            I P   L+   PA  +   ++    +  +   +   +
Sbjct: 142 PLAVMIGFGIGYTGFRSKRACQFILPMLDLMQTIPAFAYLIPILLLFGFGPVVGLIASVV 201

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                    ++ N + G    P    E A     + ++ +R+   P   P  + G     
Sbjct: 202 F----AVPPMVRNTMLGFEQIPPAISESALMSGCSRFQQFRWAEFPSALPQMLIGVNQTT 257

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
               +  I++ +            +G  +  +  K  F + +L   ++    + L+R
Sbjct: 258 MATLSMVIIAAIIGGFED------IGWEVLSAMRKAQFGQSLLSGAVIVVMAILLDR 308


>gi|110678250|ref|YP_681257.1| aliphatic sulfonates transport permease protein, putative
           [Roseobacter denitrificans OCh 114]
 gi|109454366|gb|ABG30571.1| aliphatic sulfonates transport permease protein, putative
           [Roseobacter denitrificans OCh 114]
          Length = 257

 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 102/269 (37%), Gaps = 14/269 (5%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +  +    +          L   + +  +  +L    Q    P  ++  +   L    L 
Sbjct: 1   MQTLNSAVMHSARLTPFLSLAGLLGMWVVAAMLTQDAQILPTPWQLLPPLRQELASGELW 60

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            + S T +R++ A  +++    +   +  +S  +   L P L +  ++P L  +    ++
Sbjct: 61  THLSATIVRVIWAFALAMSLGTILGLIMGRSAAVNRWLDPWLVVFLNLPALVLIVLCYLW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       E AAI A+  ++V N+   + +    +  DL+ + + +R+S W +  +
Sbjct: 121 IGL--------TEAAAITAVTLNKVPNVAVVIREGARALDPDLDALGKVYRMSWWTRMRH 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P   P +       ++  W  V+  E +          GIG  I L  +  D+  +L
Sbjct: 173 IVFPQLAPFVAAASRSGLAVIWKIVLVVEFLG------RSSGIGFQIHLYFQLFDVAMVL 226

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
               + + V+ L + +  +P      ++R
Sbjct: 227 VYAFSFITVMLLVEWIFLQPFERHVARWR 255



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 13/223 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ +  +       ++   +     T+ RV+    +A  +   +G+ +G    ++  + P
Sbjct: 44  WQLLPPLRQELASGELWTHL---SATIVRVIWAFALAMSLGTILGLIMGRSAAVNRWLDP 100

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +  +    PA V   L    +              +       +   +  GA A   D  
Sbjct: 101 WLVVFLNLPALVLIVLCYLWIGLTEA----AAITAVTLNKVPNVAVVIREGARALDPDLD 156

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +   + ++ W   R+I+ P + P+    + +     W   +V E         R++G+G
Sbjct: 157 ALGKVYRMSWWTRMRHIVFPQLAPFVAAASRSGLAVIWKIVLVVEFLG------RSSGIG 210

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             I    +      V++        +L +      P   +  R
Sbjct: 211 FQIHLYFQLFDVAMVLVYAFSFITVMLLVEWIFLQPFERHVAR 253


>gi|15605590|ref|NP_220376.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D/UW-3/CX]
 gi|3329327|gb|AAC68451.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D/UW-3/CX]
 gi|297748981|gb|ADI51527.1| ABC transporter permease protein [Chlamydia trachomatis D-EC]
 gi|297749861|gb|ADI52539.1| ABC transporter permease protein [Chlamydia trachomatis D-LC]
          Length = 589

 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLAPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSTQGLLHPLCVLVQCLPMFTLAPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|293366010|ref|ZP_06612712.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus oralis ATCC 35037]
 gi|307702406|ref|ZP_07639363.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus oralis ATCC 35037]
 gi|291315553|gb|EFE56004.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus oralis ATCC 35037]
 gi|307624083|gb|EFO03063.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus oralis ATCC 35037]
          Length = 506

 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKMADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNTNLILIGALSSAVLAIAFNFLL 198



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       ++   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKMADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNTNLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|76789600|ref|YP_328686.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13]
 gi|237805208|ref|YP_002889362.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168130|gb|AAX51138.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13]
 gi|231273508|emb|CAX10424.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 589

 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLTPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 78.0 bits (191), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPATQGLLHPLCVLVQCLPMFTLTPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|33595641|ref|NP_883284.1| putative ABC transport proteins, inner membrane component
           [Bordetella parapertussis 12822]
 gi|33600159|ref|NP_887719.1| putative ABC transport proteins, inner membrane component
           [Bordetella bronchiseptica RB50]
 gi|33565719|emb|CAE40368.1| putative ABC transport proteins, inner membrane component
           [Bordetella parapertussis]
 gi|33567757|emb|CAE31671.1| putative ABC transport proteins, inner membrane component
           [Bordetella bronchiseptica RB50]
          Length = 260

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 14/238 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVG 405
           ++               +  ++       V    W     T+  + +  +        +G
Sbjct: 22  WFIANRYLGVPYYVLPPVEGVLAALYRGYVQGDFWGDFGFTLASMAIGYVGGCTAAFIIG 81

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +       +   + PF   L + P     PL++    +   +  + ++L+      + + 
Sbjct: 82  VLFAEYRWLERLLYPFVLALQSMPKVALAPLILVWFGFGLESKAIMVALV----CFFPMF 137

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G  A      ++  +F  + W     I +P    +       +       ++V+E
Sbjct: 138 INTAVGLKATDPALLDLMRAFSASRWHILTRIKIPSAASHIFAALQISVVLGLIGAVVAE 197

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA---LNRFLWHPLYLY 580
             S       + GLG  I  +T       +   ++ +    +A   L R L   L  +
Sbjct: 198 FVS------SSKGLGYLINAATTTLDTSTMFAALISLAVLGIAGSQLIRALHRKLVFW 249



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
                    T   M    V      F+   L A+ R L  +L P +  +QS+P +     
Sbjct: 53  GDFWGDFGFTLASMAIGYVGGCTAAFIIGVLFAEYRWLERLLYPFVLALQSMPKVALAPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F      K I   L   F         M  +    L      L ++ R+F  S W 
Sbjct: 113 ILVWFGFGLESKAIMVALVCFF--------PMFINTAVGLKATDPALLDLMRAFSASRWH 164

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +   +   + +S+  G    V +E +          G+G  I  A    D 
Sbjct: 165 ILTRIKIPSAASHIFAALQISVVLGLIGAVVAEFVSSSK------GLGYLINAATTTLDT 218

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A++++  +     QL+
Sbjct: 219 STMFAALISLAVLGIAGSQLI 239


>gi|296110578|ref|YP_003620959.1| putative ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832109|gb|ADG39990.1| putative ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 305

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     +++ +V+  +I  I+ +  G+ IG+  +    + PF + L   P  V  P+ +
Sbjct: 104 LLKCLGYSVWLLVIGWVIGGILGVVTGVLIGWSTNWHYWLDPFVKFLGPIPPTVLIPIAL 163

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           S             + L+     + +     +G ++   D+ EVA +   T  +    + 
Sbjct: 164 SAFPTSFA----ASAFLLALSMWFPVTILTNSGIASVRVDYLEVADTMGATTLQKIFKVA 219

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G       ++   +V+E+           GLG YI    E   +  V  G
Sbjct: 220 LPASLPSIFVGLFNGICASFITLMVAEMLG------VKYGLGWYINWQREIMGYANVYAG 273

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++      +   L+ 
Sbjct: 274 LIVLAIAFSLIITILFK 290



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +    +   ++   VI  +   V   L   S      L P +  +  IP    +   +
Sbjct: 104 LLKCLGYSVWLLVIGWVIGGILGVVTGVLIGWSTNWHYWLDPFVKFLGPIPPTVLIPIAL 163

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F          +  A+ F +  S  + +T      + ++  D  EV+ +   +  QK 
Sbjct: 164 SAF--------PTSFAASAFLLALSMWFPVTILTNSGIASVRVDYLEVADTMGATTLQKI 215

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P S+P +   +   +   +  ++ +EM+ V        G+G YI    +      
Sbjct: 216 FKVALPASLPSIFVGLFNGICASFITLMVAEMLGVK------YGLGWYINWQREIMGYAN 269

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +   ++ +     L   +LF+
Sbjct: 270 VYAGLIVLAIAFSLIITILFK 290


>gi|225574558|ref|ZP_03783168.1| hypothetical protein RUMHYD_02635 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038225|gb|EEG48471.1| hypothetical protein RUMHYD_02635 [Blautia hydrogenotrophica DSM
           10507]
          Length = 341

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 67/187 (35%), Gaps = 11/187 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+   ++ L    +    + + +A +I +P+G+ I +   ++  +   A ++ A P+   
Sbjct: 10  QNKSQILSLLIAHIQLTCIAVGLAILIGVPLGLLISYVKKLNKAVLGIASIIQAIPSMAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
               +  +        L   +++I  +   I+ N   G      +  E A    +T  + 
Sbjct: 70  LGFAIPFLGIG----VLPSVIVVILYSLLPIVKNTFTGIQGIDPELLESAKGIGLTKTQI 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I +P   P  + G   +   A     ++     G       GLG  +       +  
Sbjct: 126 LFKIQIPLALPVIMAGIRISAVTAVGLMTMAAFIGGG-------GLGYLVFSGISTVNNS 178

Query: 554 EVVLGVL 560
           +++ G +
Sbjct: 179 QILAGAI 185



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 70/173 (40%), Gaps = 15/173 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ +++L       L +  ++L   ++ I  I+Q+IP +  L F + +           
Sbjct: 28  IAVGLAILIGVPLGLLISYVKKLNKAVLGIASIIQAIPSMALLGFAIPFLGIGV------ 81

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L ++  +    +  +  + +  +  I  +L E ++   L+  Q  + + +P ++P ++
Sbjct: 82  --LPSVIVVILYSLLPIVKNTFTGIQGIDPELLESAKGIGLTKTQILFKIQIPLALPVIM 139

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             + +S       V A  ++ +    I   G+G  +   I   +   IL   +
Sbjct: 140 AGIRIS------AVTAVGLMTMAAF-IGGGGLGYLVFSGISTVNNSQILAGAI 185


>gi|295676464|ref|YP_003604988.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295436307|gb|ADG15477.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 274

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 74/214 (34%), Gaps = 13/214 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   V+  +  + I + VG+W+   P  S+   P+ +   + P  +
Sbjct: 64  WFTGGEIYLHLWITLVETVLAFVFGTAIGLGVGLWLALAPTASALFDPYVKAANSMPRVI 123

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G           A        +
Sbjct: 124 LAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANRKQ 179

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ LP    +  +   T+ G A+  S+V E            G+G  I ++      
Sbjct: 180 LLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDI 233

Query: 553 PEVVLGVLIMCCFVLALNRFLW---HPLYLYGTR 583
             V  G+L++  F L L+  +      L  +  R
Sbjct: 234 NTVFAGILVLTAFALILDAIVGIAERRLMKWQPR 267



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 76/228 (33%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ ++  +        +  +   T +  + A V             A +     +  P +
Sbjct: 54  PQKVLQRIWEWFTGGEIYLHLWITLVETVLAFVFGTAIGLGVGLWLALAPTASALFDPYV 113

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               S+P +       V+F      KV        F +F        F++YQ +  +   
Sbjct: 114 KAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPV 165

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R    +  Q   Y+ +P +M  +  ++  S+   +   V  E +          G
Sbjct: 166 VLANARMLGANRKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARG 219

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +G  I  A    D+  +   +L +     + D ++    R ++ W  +
Sbjct: 220 VGYLILQAEGTFDINTVFAGILVLTAFALILDAIVGIAERRLMKWQPR 267


>gi|229029999|ref|ZP_04186064.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1271]
 gi|228731260|gb|EEL82177.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1271]
          Length = 503

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|255311697|ref|ZP_05354267.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 6276]
 gi|255317998|ref|ZP_05359244.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 6276s]
 gi|296436412|gb|ADH18586.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/9768]
 gi|296438271|gb|ADH20432.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/11074]
 gi|297140772|gb|ADH97530.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/9301]
          Length = 589

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLAPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSTQGLLHPLCVLVQCLPMFTLAPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|121607825|ref|YP_995632.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552465|gb|ABM56614.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 264

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 12/203 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T++R +    +A+++ +P+G+ +G        ++       + P++   PL +     
Sbjct: 71  LFTVWRTLQAFGVAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGV 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +N     +    FG+   ++FN   G           A     + W+ ++ +++    
Sbjct: 131 SDINKVAIAA----FGSLLIVIFNSAYGVINARRQRIMAAKVMGASRWQIFKDVLIRESL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                G  +A   A    +V+E+           GLG  I ++ +  +   +   +L   
Sbjct: 187 QPSFVGLRSAVSMALVIVVVAEMFIGSD-----NGLGHRIIDAQQVLNVKTMYAAILAAG 241

Query: 564 CFVLALNRFLW---HPLYLYGTR 583
               ALN         +  +  R
Sbjct: 242 MLGYALNVLFLVLERRIVHWSGR 264



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P I  +  FV    ++   +        P   V  +   L   +L      T  R L
Sbjct: 19  RLLPCIGPVALFVAWDIVVRTGMIRAILLPPPAATVTTLVTGLLGGALLTDFLFTVWRTL 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A  ++ +       L   + +    +  ++D  +S P    +   ++ F      KV  
Sbjct: 79  QAFGVAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGVSDINKVAI 138

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A   ++  +         F+    + N  R     ++    S WQ F  + +  S+    
Sbjct: 139 AAFGSLLIVI--------FNSAYGVINARRQRIMAAKVMGASRWQIFKDVLIRESLQPSF 190

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++S     VV +EM +  D      G+G  I  A +  ++  +  A+L    + +
Sbjct: 191 VGLRSAVSMALVIVVVAEMFIGSDN-----GLGHRIIDAQQVLNVKTMYAAILAAGMLGY 245

Query: 254 LYDQLLF---RPMIVWSNK 269
             + L     R ++ WS +
Sbjct: 246 ALNVLFLVLERRIVHWSGR 264


>gi|56707174|ref|YP_163804.1| glycine betaine transporter [Lactobacillus salivarius UCC118]
 gi|33321142|gb|AAQ06371.1| glycine betaine transport system permease protein/glycine
           betaine-binding protein [Lactobacillus salivarius
           UCC118]
          Length = 528

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 34  SDLLTALWQH---LGISLAALVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 90

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 91  LGLLIPLVGIGTVPTVIALVIYALL----PIFQNTYLGISEIDASIEEAADAFGMSRMRK 146

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 147 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 199

Query: 554 EVVLG 558
            +++G
Sbjct: 200 LLLIG 204



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 74/186 (39%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+A+VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 34  SDLLTALWQHLGISLAALVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 87

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    +  + A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 88  --LALLGLLIPLVGIGTVPTVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMR 145

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 146 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 198

Query: 239 LAILYA 244
             +L  
Sbjct: 199 SLLLIG 204


>gi|228939437|ref|ZP_04102025.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228972291|ref|ZP_04132903.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978905|ref|ZP_04139271.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis Bt407]
 gi|228780779|gb|EEM28991.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis Bt407]
 gi|228787436|gb|EEM35403.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228820137|gb|EEM66174.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939985|gb|AEA15881.1| glycine betaine transport system permease protein/glycine
           betaine-binding protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 503

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|239625202|ref|ZP_04668233.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519432|gb|EEQ59298.1| taurine transport system permease protein tauC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 260

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++    AS   I +G+ +G+   + +  QP   ++   P   + P+ +       
Sbjct: 68  SLSRVLIAYGAASAAGIVLGLAMGWSKSVEAVFQPLFGIIRPIPPIAWIPISIIWFGLG- 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+       +  N  AGA A        A     +  + +  +++P   P 
Sbjct: 127 ---ESAKYFLIFLAAFSNVTLNAWAGAKAMDYKLVGTARMLGASRTQIFLTVVMPSSVPQ 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   A   +W   + +E+         + G+G  I          ++++G++ +   
Sbjct: 184 IFAGLQIAMSSSWATVVAAEMVR------SSEGVGWIITTGMNNNDIVQILVGIMAIGIV 237

Query: 566 VLALNRFLWH 575
              L   +  
Sbjct: 238 GFVLAVIMRK 247



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L  +   +  R+L A   +     V       S+ +  V  P+  I++ IP + ++  +
Sbjct: 60  NLLVHIGWSLSRVLIAYGAASAAGIVLGLAMGWSKSVEAVFQPLFGIIRPIPPIAWIPIS 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E A  F IF +   N+T + +     +   L   +R    S  Q 
Sbjct: 120 IIWFGLG--------ESAKYFLIFLAAFSNVTLNAWAGAKAMDYKLVGTARMLGASRTQI 171

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P S+P +   + ++MS  W  VVA+EM+   +      G+G  I   +   D++
Sbjct: 172 FLTVVMPSSVPQIFAGLQIAMSSSWATVVAAEMVRSSE------GVGWIITTGMNNNDIV 225

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL  ++ +  V F+   ++
Sbjct: 226 QILVGIMAIGIVGFVLAVIM 245


>gi|300312968|ref|YP_003777060.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300075753|gb|ADJ65152.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 283

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           FT      +     IT+   V+  +I ++  + +G+W+   P  S+ + P+ +   + P 
Sbjct: 71  FTLSFPAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPR 130

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            +  P+          +       L+ F     + FNV  G           A       
Sbjct: 131 VILAPIFAMWFGLGIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANA 186

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +  R + LP    +  +   T+ G A+  ++V E            G+G  I ++    
Sbjct: 187 RQLLRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLG------SARGVGYLILQAEGTF 240

Query: 551 SFPEVVLGVLIMCCFVLALN 570
               V  G++++  F L L+
Sbjct: 241 DINTVFAGIVVLTIFALVLD 260



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +  +   T    + A VI  +F        A S     +L P +    S+P +    
Sbjct: 76  PAEIYSHLLITLTETVLAFVIGTVFGLAIGLWLALSPTASAILDPYVKAANSMPRVILAP 135

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      KV  A     F +F        F++YQ +  +   +   +R    +  
Sbjct: 136 IFAMWFGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANAR 187

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P +   +  ++  S+   +   V  E +          G+G  I  A    D
Sbjct: 188 QLLRTVYLPSATSWVFSSLHTSIGLAFVGAVVGEYLG------SARGVGYLILQAEGTFD 241

Query: 238 LLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
           +  +   ++ +     + D    ++ + ++ W  K
Sbjct: 242 INTVFAGIVVLTIFALVLDLAVGVIEKRLMKWQPK 276


>gi|320183835|gb|EFW58668.1| Alkanesulfonates transport system permease protein [Shigella
           flexneri CDC 796-83]
          Length = 161

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 19/168 (11%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   P     PLV+                L+  GT + I  N   G         E+A
Sbjct: 1   MLRNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMA 56

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S+ ++G   + ++ILPG  P  + G   A G  W   IV+E  S        +G+G   
Sbjct: 57  RSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLA 110

Query: 544 AESTEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGT 582
             + E      VV+ +++              L R    W+P Y    
Sbjct: 111 MNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKE 158



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 17/174 (9%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +++++P L  +   +++F           E A IF +    ++ +  + +  + NI R L
Sbjct: 1   MLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGL 52

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E++RS+ LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          GI
Sbjct: 53  VEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------GI 106

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
           G     A +      ++ A++    +  L D   QLL R  + W+  + L+  T
Sbjct: 107 GYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEAT 160


>gi|15896103|ref|NP_349452.1| proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           acetobutylicum ATCC 824]
 gi|15025893|gb|AAK80792.1|AE007782_6 Proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           acetobutylicum ATCC 824]
 gi|325510257|gb|ADZ21893.1| Proline/glycine betaine ABC-type transport system, permease
           component fused to periplasmic component [Clostridium
           acetobutylicum EA 2018]
          Length = 523

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 72/181 (39%), Gaps = 15/181 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +     L A+++S++       L  + R++   ++ + +++QSIP +  L F +  F  
Sbjct: 20  LQHIELTLFAVIVSIIIGVPIGILITRVRKISSTVIALANVVQSIPSMALLGFLIPVFGI 79

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                       AI  +    +  +  + +  L NI   + E +    L+  Q    + +
Sbjct: 80  G--------SKPAIVMVVLYSLLPIIKNTFTGLKNIQPHIIEAATGIGLTKNQILVKISL 131

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP ++  + +S       VV +  ++     I   G+G  +   ++  +   IL   
Sbjct: 132 PLAMPVIMSGIRIS-------VVTAVGLMTIAAFIGAGGLGYLVFSGVQTVNNNMILAGA 184

Query: 246 L 246
           +
Sbjct: 185 I 185



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +I++ II +P+GI I     ISS +   A ++ + P+      ++          + 
Sbjct: 27  LFAVIVSIIIGVPIGILITRVRKISSTVIALANVVQSIPSMALLGFLIPVFGIG----SK 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++  +   I+ N   G         E A+   +T  +    I LP   P  ++G 
Sbjct: 83  PAIVMVVLYSLLPIIKNTFTGLKNIQPHIIEAATGIGLTKNQILVKISLPLAMPVIMSGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             +   A     ++     G       GLG  +    +  +   ++ G +
Sbjct: 143 RISVVTAVGLMTIAAFIGAG-------GLGYLVFSGVQTVNNNMILAGAI 185


>gi|56963756|ref|YP_175487.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
 gi|56909999|dbj|BAD64526.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
          Length = 524

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 59/140 (42%), Gaps = 8/140 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +         L++++I++        L  + +R+   ++    ++Q+IP L  L F V
Sbjct: 24  LIRAFWEHIQLSLASLLIAVAIGVPLGILLTRYKRISEWVIGTAAVLQTIPSLALLGFLV 83

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++               AI A+    +  +  + Y  +  I   L E ++   ++ +++ 
Sbjct: 84  LFVGIG--------TTPAIIALTAYALLPILRNTYTGIKGIDPSLIEAAKGMGMNSYRRL 135

Query: 181 WYLGVPFSMPGLVWNMMMSM 200
             + +P +MP ++  +  SM
Sbjct: 136 LKVELPIAMPTVMAGIRTSM 155



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++IA  I +P+GI +     IS  +   A +L   P+      +V  V        +
Sbjct: 36  LASLLIAVAIGVPLGILLTRYKRISEWVIGTAAVLQTIPSLALLGFLVLFVGIGTTPAII 95

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+   +      IL N   G         E A    +  +R    + LP   P  + G 
Sbjct: 96  ALTAYALL----PILRNTYTGIKGIDPSLIEAAKGMGMNSYRRLLKVELPIAMPTVMAGI 151

Query: 511 ITAC 514
            T+ 
Sbjct: 152 RTSM 155


>gi|94311158|ref|YP_584368.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93355010|gb|ABF09099.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Cupriavidus metallidurans CH34]
          Length = 347

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 10/205 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   +      T+  + + +   ++    +G+ IG+   I   I P  ++L   P
Sbjct: 137 EVYLDDWQRLGDSAFNTLKLLGLGVGYGALAGFLIGVSIGWSRRIGYWIHPVLRVLGPLP 196

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL        +         L+   T + +     +G +     + +VA +   +
Sbjct: 197 STALLPLTFYFFPSSYS----AAVFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGAS 252

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW     + +P   P    G     G +++  + +E+          +GLG Y+  +   
Sbjct: 253 GWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEMMG------VKSGLGWYLTWAQGW 306

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLW 574
            S+  +   +++M      +   L+
Sbjct: 307 ASYVNMYAALIVMALLFSGVITLLF 331



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 92/242 (38%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  LV     IL   +     P        I +   D   L   A  T   +   +  
Sbjct: 104 LVALPLVFTAWEILTAKMAILPTPFFAPPQALIEVYLDDWQRLGDSAFNTLKLLGLGVGY 163

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 164 GALAGFLIGVSIGWSRRIGYWIHPVLRVLGPLPSTALLPLTFYFF--------PSSYSAA 215

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  +  + +   +V+R+   SGW     + +P ++P +   + M
Sbjct: 216 VFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFM 275

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +V +EM+ V        G+G Y+  A      + +  A++ M  +      L
Sbjct: 276 GLGASFSVLVTAEMMGVKS------GLGWYLTWAQGWASYVNMYAALIVMALLFSGVITL 329

Query: 259 LF 260
           LF
Sbjct: 330 LF 331


>gi|167562822|ref|ZP_02355738.1| hypothetical protein BoklE_09699 [Burkholderia oklahomensis EO147]
          Length = 310

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 96/250 (38%), Gaps = 12/250 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQYASRTTLRMLSAMVIS 79
           L+A VL+ G          +  +P      +    DV +  LP   + +   +L    + 
Sbjct: 65  LIALVLIAGWEFAARAIDNDLLLPSFSATALAFAHDVANGELPAKIAASLSVLLRGYALG 124

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +   F   TLA  +R    +L  +  +   +P +  L   +++F             + +
Sbjct: 125 VACAFALTTLAVTTRAGRDLLTMLTAMFNPLPSIALLPLALLWFGLGTG--------SLL 176

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  + +W +  + +     +P  L  V R++ L+G +    + +P ++P ++  + + 
Sbjct: 177 FVLVHAVLWPLALNTFAGFQAVPATLRMVGRNYGLTGLRHVVAILIPAALPSILAGLRVG 236

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  W  ++A+E++            G YI     E     +   +  ++ +  + +  +
Sbjct: 237 WAFAWRTLIAAELVFGASAGGGGL--GWYIFRNRNELYTDRVFAGLAAVIVIGLIVEHGV 294

Query: 260 FRPMIVWSNK 269
           F  +   + K
Sbjct: 295 FDALERATVK 304



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 6/201 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++  ++    +       +             +     +    P+    PL +     
Sbjct: 111 AASLSVLLRGYALGVACAFALTTLAVTTRAGRDLLTMLTAMFNPLPSIALLPLALLWFGL 170

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L  +++    W +  N  AG  A P   + V  ++ +TG R    I++P   
Sbjct: 171 GTGS----LLFVLVHAVLWPLALNTFAGFQAVPATLRMVGRNYGLTGLRHVVAILIPAAL 226

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       AW   I +E+             G YI  +  +     V  G+  + 
Sbjct: 227 PSILAGLRVGWAFAWRTLIAAELVFGASAGGGGL--GWYIFRNRNELYTDRVFAGLAAVI 284

Query: 564 CFVLALNRFLWHPLYLYGTRC 584
              L +   ++  L     + 
Sbjct: 285 VIGLIVEHGVFDALERATVKR 305


>gi|315083476|gb|EFT55452.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA2]
          Length = 288

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDTETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L +  V     ++
Sbjct: 258 GLGVFIVAVYLARI 271



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +S  L +    V   +    A W+   + +  F     +        T+  VVV +I+A 
Sbjct: 49  LSKPLYLVMMVVFAAIGWACANWRVGLFALIGFYLVRSMDQWNNTMQTLALVVVAVILAL 108

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ IP+GIW       S+ I+P    +   P+  +   V+       +   +   +  + 
Sbjct: 109 ILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQVPGAIATIIFALP 168

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               +       G      +  E  ++F  +       I +P   P  + G       A 
Sbjct: 169 PGVRF----TELGIRGVDTETVEAGAAFGASPRHILWRIQMPLAMPTVMAGVNQVIMLAL 224

Query: 519 NASIVS 524
           +  ++S
Sbjct: 225 SMVVLS 230


>gi|325678082|ref|ZP_08157718.1| ABC transporter, permease protein [Ruminococcus albus 8]
 gi|324110220|gb|EGC04400.1| ABC transporter, permease protein [Ruminococcus albus 8]
          Length = 319

 Score = 94.2 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 10/203 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           ++D   ++     +M  ++  +    II   +GI IGF       I P  ++L   P+  
Sbjct: 112 FEDRSLILKCIGFSMGILLKGVAGGLIIGFFMGIAIGFSKAAEYWINPLIRILGPIPSTA 171

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + P+++   S          S ++     +  +    +G +   N + EV+S+      +
Sbjct: 172 WIPILLVVFS----EARSASSFIIGISVWFPTVVLTSSGIANVKNSYFEVSSTLGAGQLQ 227

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I +P   P    G      G++ A + +E+           G+G Y+    E  ++
Sbjct: 228 KIFRIGVPAAMPSIFLGLFNGICGSFVALMTAEMIG------AKYGIGWYVNWQKEMMAY 281

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
             V  G++++      +   L+ 
Sbjct: 282 SNVYAGLIVIAVMFYLVITVLFK 304



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 14/245 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P +  ++ F+ ++ I  +          P        +  D   + +    +   +L  +
Sbjct: 74  PFLAGVILFLNLLNIFTVKTALFPVLYFPALDRVFGTLFEDRSLILKCIGFSMGILLKGV 133

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
              L+  F        S+     + P++ I+  IP   ++   +V F          A  
Sbjct: 134 AGGLIIGFFMGIAIGFSKAAEYWINPLIRILGPIPSTAWIPILLVVFSE--------ARS 185

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+ F I  S  +         + N+     EVS +      QK + +GVP +MP +   +
Sbjct: 186 ASSFIIGISVWFPTVVLTSSGIANVKNSYFEVSSTLGAGQLQKIFRIGVPAAMPSIFLGL 245

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              + G +  ++ +EMI          GIG Y+    +      +   ++ +  + +L  
Sbjct: 246 FNGICGSFVALMTAEMIG------AKYGIGWYVNWQKEMMAYSNVYAGLIVIAVMFYLVI 299

Query: 257 QLLFR 261
            +LF+
Sbjct: 300 TVLFK 304


>gi|170741621|ref|YP_001770276.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168195895|gb|ACA17842.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 251

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 99/255 (38%), Gaps = 20/255 (7%)

Query: 18  NIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            +  L AF  +   +    L        P  + +                 +    ++ +
Sbjct: 11  PLAGLAAFFALWEAVPRAGLVNPAFLPPPSALPEAFLREWRSGLWLAAIGDSVGHYVAGL 70

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I +       TL         +   ++ +++ +P L ++ F +++F          +  
Sbjct: 71  AIGVGLGIAAGTLTGLFPTAEALSAWVVRVLRPVPGLAWVPFAIIWF--------WVSPA 122

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWN 195
           AA+F I     W + F+ + ++  + RDL EV+++F   S  ++   +  P + PG++  
Sbjct: 123 AALFIIAVGVFWIVYFASHGAIRGVDRDLVEVAQAFGFRSAPERLLKVVWPAATPGVLVG 182

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  ++   W  VVA+E+  V       PG+G  +  A        ++  MLTM  +  ++
Sbjct: 183 VRTAIGQAWMAVVAAEIFGV-------PGLGQRMMQASTLLATDIVVVYMLTMALLYGVF 235

Query: 256 D---QLLFRPMIVWS 267
           D     L R ++ W 
Sbjct: 236 DAGFTALQRRVLRWQ 250



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 73/246 (29%), Gaps = 14/246 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385
                               W  V     +  A+      +     ++    +WL  I  
Sbjct: 2   RPRRAAALRPLAGLAAFFALWEAVPRAGLVNPAFLPPPSALPEAFLREWRSGLWLAAIGD 61

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   V  + I   + I  G   G  P   +      ++L   P   + P  +       
Sbjct: 62  SVGHYVAGLAIGVGLGIAAGTLTGLFPTAEALSAWVVRVLRPVPGLAWVPFAIIWFWVSP 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFP 504
                    ++  G  W + F           D  EVA +F           ++ P   P
Sbjct: 122 A----AALFIIAVGVFWIVYFASHGAIRGVDRDLVEVAQAFGFRSAPERLLKVVWPAATP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  TA G AW A + +E+           GLG  + +++   +   VV+ +L M  
Sbjct: 178 GVLVGVRTAIGQAWMAVVAAEIFG-------VPGLGQRMMQASTLLATDIVVVYMLTMAL 230

Query: 565 FVLALN 570
                +
Sbjct: 231 LYGVFD 236


>gi|220919218|ref|YP_002494522.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957072|gb|ACL67456.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 245

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 88/216 (40%), Gaps = 14/216 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + D +        L     R+  R+     IS+          A+S  +   L P
Sbjct: 25  PGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAISIAVGVPLGVALARSALVQAALRP 84

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I   +Q++P + +L   V++F          +E A +F +    +  ++ +   ++  + 
Sbjct: 85  ITTGLQALPSICWLPLAVLWFGL--------SEAAIVFVVVMGSLLAVSIATEDAIAGVD 136

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   + +  + G +    + +P ++PG++  + +  S  W  ++A E++ V       
Sbjct: 137 PVLLRAAGTLGIRGPRFHLGVLLPAALPGILTGLKLGWSFAWRALMAGELLFVAG----- 191

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  +A   +  D   ++  M+ ++ +  L D++
Sbjct: 192 -GLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRV 226



 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     I+  + +P+G+ +     + + ++P    L A P+  + PL V       
Sbjct: 50  SLGRLAQGYAISIAVGVPLGVALARSALVQAALRPITTGLQALPSICWLPLAVLWFGLSE 109

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +++ G+   +        +         A +  I G R+   ++LP   P 
Sbjct: 110 A----AIVFVVVMGSLLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLPAALPG 165

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW A +  E+           GLG  +A+  E     +V+  ++ +   
Sbjct: 166 ILTGLKLGWSFAWRALMAGELL------FVAGGLGQLLAQGRELLDAAQVMGVMVCIVAL 219

Query: 566 VLALNR 571
            + ++R
Sbjct: 220 GILVDR 225


>gi|298294221|ref|YP_003696160.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296930732|gb|ADH91541.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 305

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V +L      T +R++  + +               + L  +L+P + ++  I  + +L 
Sbjct: 99  VGALLATMGWTLMRVVVGLALGFACGVAVGAAIHYVKLLRNLLLPTILLLAPISPVAWLP 158

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F           ++ AIF +F +  + +  S    + ++P++   V+R    S  
Sbjct: 159 VAIFVFGIG--------DVPAIFLVFITVFFAIVLSTGAQIESVPKNYIHVARIMGASQR 210

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q FW + +P  +P L   + +++   W  V+ +E + VG       G+G   ++A    +
Sbjct: 211 QTFWKVILPAILPSLFMTLRLNLFAAWMVVLIAETVGVGT------GLGQITSMARSTFN 264

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              + + M  +  + FL D  L
Sbjct: 265 AKLVFFTMAIIGLLGFLSDFAL 286



 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             V  ++     T+ RVVV + +     + VG  I +   + + + P   LLA      +
Sbjct: 97  GGVGALLATMGWTLMRVVVGLALGFACGVAVGAAIHYVKLLRNLLLPTILLLAPISPVAW 156

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ +          ++    L+     + I+ +  A   + P ++  VA     +  + 
Sbjct: 157 LPVAIFVFGIG----DVPAIFLVFITVFFAIVLSTGAQIESVPKNYIHVARIMGASQRQT 212

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +ILP I P            AW   +++E    G      TGLG   + +    +  
Sbjct: 213 FWKVILPAILPSLFMTLRLNLFAAWMVVLIAETVGVG------TGLGQITSMARSTFNAK 266

Query: 554 EVVLGVLIMCCFVLALN 570
            V   + I+       +
Sbjct: 267 LVFFTMAIIGLLGFLSD 283


>gi|213026789|ref|ZP_03341236.1| glycine betaine transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 349

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            + I +  ++   +    +    + I  I +        A  T   +L+A++  ++    
Sbjct: 185 PVAIILFALIAWQVSGVGMGIAAL-ISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLP 243

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  +  IFA    
Sbjct: 244 MGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 296

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  +  +
Sbjct: 297 -LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQT 349



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 25/231 (10%)

Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339
           P DSWV      T  + ++       F  +   V  +      +    P       +   
Sbjct: 141 PLDSWV------TEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMP-------APVA 187

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     I W     G+ I      I            +       IT+  V+  ++   +
Sbjct: 188 IILFALIAWQVSGVGMGIAALISLIAI--------GAIGAWSQAMITLALVLTALLFCVV 239

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+GIW+   P  +  ++P    +   PA V+   +V          N+   ++ I  
Sbjct: 240 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 295

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               I+   I G +  P D  E + SF  +  +    + LP   P  + G 
Sbjct: 296 ALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 346


>gi|218897248|ref|YP_002445659.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus G9842]
 gi|228965255|ref|ZP_04126349.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218544265|gb|ACK96659.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus G9842]
 gi|228794489|gb|EEM42001.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 503

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|145294562|ref|YP_001137383.1| hypothetical protein cgR_0513 [Corynebacterium glutamicum R]
 gi|140844482|dbj|BAF53481.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 267

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 18/251 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  +    +V  +I ++ +  +   V                    A  T    L+  V+
Sbjct: 27  VVGIAGLFVVWELIVLITNPPRFLLVGPSAAFAELFN-RPGYFASNAWVTLQEALAGFVL 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                 +          +   L P L  + +IP +      +V+F   +  K        
Sbjct: 86  GTALGVLCGAALHYFPAVRTFLYPALVAIDTIPKVALAPLFIVWFGFGFESK-------- 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F       + +  + +  L ++P +L+E++R  R + WQ+   +   +++P +   M +
Sbjct: 138 VFVAMAIAFFPLVINTFDGLSSVPHELKELARINRATTWQRLSKIEFIYAVPSIFSGMKI 197

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY--- 255
           S+S      V  E I          G+G  I LA  + DL ++  A + +  +       
Sbjct: 198 SISLAVGGAVVGEFISGSK------GLGYVILLANSQVDLASMFAAFIVLASISLALFYA 251

Query: 256 DQLLFRPMIVW 266
             L  + ++ W
Sbjct: 252 VDLAAKRLVPW 262



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 10/194 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             Y      +T+   +   ++ + + +  G  + + P + + + P    +   P     P
Sbjct: 65  PGYFASNAWVTLQEALAGFVLGTALGVLCGAALHYFPAVRTFLYPALVAIDTIPKVALAP 124

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +    +   +       + +    + ++ N   G S+ P++ KE+A     T W+   
Sbjct: 125 LFIVWFGFGFESK----VFVAMAIAFFPLVINTFDGLSSVPHELKELARINRATTWQRLS 180

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I      P   +G   +   A   ++V E  S         GLG  I  +  +     +
Sbjct: 181 KIEFIYAVPSIFSGMKISISLAVGGAVVGEFISGSK------GLGYVILLANSQVDLASM 234

Query: 556 VLGVLIMCCFVLAL 569
               +++    LAL
Sbjct: 235 FAAFIVLASISLAL 248


>gi|330719446|ref|ZP_08314046.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc fallax KCTC 3537]
          Length = 508

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEEAADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|299134830|ref|ZP_07028022.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298590640|gb|EFI50843.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 279

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I+       +           +   + +     +      T++   +  II S+  +
Sbjct: 44  LLVIWQAASTWLIDPFFISSPTEVLARLWAWTRDGSIFVHIWATLYATFLGFIIGSVAGV 103

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GIW+G  P +S  + P+     A P     PL++        +     ++L++F    
Sbjct: 104 IGGIWLGMSPFVSRLLNPYIWAFNALPKVALAPLLILWFGLGIQSKVALAAVLVVFLVF- 162

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
               N  +G      D  +          +    +ILP    +   G  +A   A    I
Sbjct: 163 ---VNTFSGVREVDRDLIDGVRLMKANRSQILMKVILPSAMSWIFVGLKSALPFALIGVI 219

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + E+ +         GLG  +  +  +         + I+      LN  +
Sbjct: 220 IGEMIA------SNKGLGYLVQRAGSEFDTAGAFAALTIIAVIAAVLNELV 264



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 83/237 (35%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++    +  L      + P +++  +       S+  +   T        +I  + 
Sbjct: 42  IVLLVIWQAASTWLIDPFFISSPTEVLARLWAWTRDGSIFVHIWATLYATFLGFIIGSVA 101

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +       S  +  +L P +    ++P +      +++F      KV  A +  +F +
Sbjct: 102 GVIGGIWLGMSPFVSRLLNPYIWAFNALPKVALAPLLILWFGLGIQSKVALAAVLVVFLV 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                     + +  +  + RDL +  R  + +  Q    + +P +M  +   +  ++  
Sbjct: 162 --------FVNTFSGVREVDRDLIDGVRLMKANRSQILMKVILPSAMSWIFVGLKSALPF 213

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               V+  EMI          G+G  +  A  E D      A+  +  +  + ++L+
Sbjct: 214 ALIGVIIGEMIASNK------GLGYLVQRAGSEFDTAGAFAALTIIAVIAAVLNELV 264


>gi|299134542|ref|ZP_07027734.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298590352|gb|EFI50555.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 298

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 84/220 (38%), Gaps = 10/220 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            + +      +    LP  A  +   +L      +    +   LA  +R     L  +  
Sbjct: 79  SETMSAFFANIGNGVLPARAWSSVKVLLMGYACGITLAAILTGLAITTRIGTDFLETLTS 138

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F             + +F +  S  W +  + +    ++ R L
Sbjct: 139 MFNPLPAIALLPLALIWFGLGNG--------SLVFVLVHSVTWAIALNTHSGFLSVSRTL 190

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           + V R++ L G      + +P + P ++  + +  +  W  ++A+E++    +       
Sbjct: 191 KMVGRNYGLGGLGYIRKILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL-- 248

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           G +I       D+  +   +LT++ +  + + ++FR +  
Sbjct: 249 GWFIFENKNSLDIPTVFAGLLTVIIIGLVVENVIFRAIEA 288



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 7/178 (3%)

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           ++  I  G+ I      +  ++    +    PA    PL +      + +    L  +++
Sbjct: 114 TLAAILTGLAI-TTRIGTDFLETLTSMFNPLPAIALLPLALIWFGLGNGS----LVFVLV 168

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               W I  N  +G  +     K V  ++ + G  + R I++P  FP  +TG       A
Sbjct: 169 HSVTWAIALNTHSGFLSVSRTLKMVGRNYGLGGLGYIRKILIPAAFPSILTGLKIGWAFA 228

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           W   I +E+             G +I E+      P V  G+L +    L +   ++ 
Sbjct: 229 WRTLIAAELVFGVSSGSGGL--GWFIFENKNSLDIPTVFAGLLTVIIIGLVVENVIFR 284


>gi|330470122|ref|YP_004407865.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328813093|gb|AEB47265.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 285

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 82/259 (31%), Gaps = 10/259 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +  + R   V         +          +    W+ V     I  A       V  
Sbjct: 15  EPLHAVPRGRRVRAGDLRLATVAALLPAVGLLVAFGLWWLVARLELIHPAALPPPGSVLS 74

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
              +    ++    +T   ++V   +++   + +G+ +     +     P    + A P 
Sbjct: 75  AFLERPDRLLEHTAVTTRAILVGFALSAAAGVLIGLALAASRTVERMFTPLLVAVNAVPK 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL+V  + +        +  ++     + I+ +   G +  P +  E+  S++ + 
Sbjct: 135 ITLGPLLVVALGWGQK----PILTMVFLLCFFPIVLSTATGLTTTPAELAELVRSYNASR 190

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+ +R I  P   P    G   A   A   +++ E  +         GLG  I +    G
Sbjct: 191 WQSFRKIRFPAALPQIFVGLKVAMPLAAIGAVIGEFQAGEG------GLGYVIQQYAGVG 244

Query: 551 SFPEVVLGVLIMCCFVLAL 569
                   ++++    +  
Sbjct: 245 DTATAWAAIILIALVSILF 263



 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 86/235 (36%), Gaps = 16/235 (6%)

Query: 23  LAFVLVIGIINIL--LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +  ++  G+  ++  L  I    +P     +         L ++ + TT  +L    +S 
Sbjct: 43  VGLLVAFGLWWLVARLELIHPAALPPPGSVLSAFLERPDRLLEHTAVTTRAILVGFALSA 102

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               +     A SR +  +  P+L  + ++P +      VV             +   + 
Sbjct: 103 AAGVLIGLALAASRTVERMFTPLLVAVNAVPKITLGPLLVVALGWG--------QKPILT 154

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F    + +  S    L   P +L E+ RS+  S WQ F  +  P ++P +   + ++M
Sbjct: 155 MVFLLCFFPIVLSTATGLTTTPAELAELVRSYNASRWQSFRKIRFPAALPQIFVGLKVAM 214

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                   A+   V+G+      G+G  I       D      A++ +  V  L+
Sbjct: 215 PL------AAIGAVIGEFQAGEGGLGYVIQQYAGVGDTATAWAAIILIALVSILF 263


>gi|119952442|ref|YP_950118.1| putative ABC transporter [Arthrobacter aurescens TC1]
 gi|119951572|gb|ABM10482.1| putative ABC transporter [Arthrobacter aurescens TC1]
          Length = 232

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM    + +++A ++ + +G  IG    +        + L   P+    PL V       
Sbjct: 35  TMLAWAIGLVMAIVLAVVLGFIIGSSMFLRKFTNSTVEFLRPIPSVALIPLAVLLFGV-- 92

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+++ + W +   V+ G +   N   + A S+ +      R+++ P   PY
Sbjct: 93  --KIESTLMLVVYASFWQVFIQVLYGVADVDNVAMQTAKSYGLGTMARVRHVVFPTALPY 150

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   A   A   +I +E+       + + GLG  IA +   G+   +   VL     
Sbjct: 151 LMTGIRLAASVALILAITAELV------IGSPGLGREIALAQSGGAISGMYALVLATGLI 204

Query: 566 VLALN 570
            + +N
Sbjct: 205 GVVIN 209



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 89/235 (37%), Gaps = 17/235 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                +++  +     + +       T L     +V++++   V   +   S  L     
Sbjct: 9   LPPASEVIAALITDFGLTAFWVAVGETMLAWAIGLVMAIVLAVVLGFIIGSSMFLRKFTN 68

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             ++ ++ IP +  +   V+ F             + +  +  +  W +   +   + ++
Sbjct: 69  STVEFLRPIPSVALIPLAVLLFGVKI--------ESTLMLVVYASFWQVFIQVLYGVADV 120

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                + ++S+ L    +  ++  P ++P L+  + ++ S      + +E++      I 
Sbjct: 121 DNVAMQTAKSYGLGTMARVRHVVFPTALPYLMTGIRLAASVALILAITAELV------IG 174

Query: 222 LPGIGSYIALAIKEQDLL---AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
            PG+G  IALA     +    A++ A   +  VI L  + + R  + W +  R E
Sbjct: 175 SPGLGREIALAQSGGAISGMYALVLATGLIGVVINLVMRFIERKTLSWHSSIRSE 229


>gi|307297821|ref|ZP_07577627.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917081|gb|EFN47463.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 258

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 89/245 (36%), Gaps = 18/245 (7%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFR 389
             + ++ ++ + +  +   +A  I    +       T ++ L +I           T  +
Sbjct: 11  RKRTLAPIVSVGFLLLGWFIASAIVSSDLLLPGPLETMEEFLRIISSRKGWSDIAETCAK 70

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             + + IA  + + VG  +G    +   I+P   +L + P   +  L +        +P 
Sbjct: 71  AFLGLFIALGLGLAVGFVMGLIDVLYELIKPIVVILQSIPIVSWLALAIFWWGVGFSSP- 129

Query: 450 LWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               + ++F T + I   N+  G         E+A  + I     +  I L   FP+ V+
Sbjct: 130 ----VYIVFLTLFPIFTINIAEGVRNVDKKLVEMAKIYKIPRNTVFGKIYLASAFPFIVS 185

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                 G  W +  V+E        +  +G+G  ++++    +   V    L++    + 
Sbjct: 186 SMRAGIGIMWKSVAVAEFM------VGASGIGRAMSDAKYSINIERVFAYTLVLVVLGIL 239

Query: 569 LNRFL 573
             R L
Sbjct: 240 TERLL 244



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 98/248 (39%), Gaps = 14/248 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            +R    I  +   +L   I + ++        P + ++     +         + T  +
Sbjct: 11  RKRTLAPIVSVGFLLLGWFIASAIVSSDLLLPGPLETMEEFLRIISSRKGWSDIAETCAK 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               + I+L        +      L  ++ PI+ I+QSIPI+ +L   + ++   +    
Sbjct: 71  AFLGLFIALGLGLAVGFVMGLIDVLYELIKPIVVILQSIPIVSWLALAIFWWGVGFSSP- 129

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  ++ +F +     T ++ + + N+ + L E+++ +++     F  + +  + P 
Sbjct: 130 -------VYIVFLTLFPIFTINIAEGVRNVDKKLVEMAKIYKIPRNTVFGKIYLASAFPF 182

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V +M   +   W  V  +E +V         GIG  ++ A    ++  +    L ++ +
Sbjct: 183 IVSSMRAGIGIMWKSVAVAEFMVGAS------GIGRAMSDAKYSINIERVFAYTLVLVVL 236

Query: 252 IFLYDQLL 259
             L ++LL
Sbjct: 237 GILTERLL 244


>gi|239816931|ref|YP_002945841.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239803508|gb|ACS20575.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 256

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 78/241 (32%), Gaps = 14/241 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----VIWLGCITMFRVVV 392
            +   ++L +    +   +  G       +      +         +      T +  + 
Sbjct: 8   ERWSPWLLLVAVILLWQVICAGFGVSDFIFPSPLRIWTQFWEFKEIIAGHAWRTFWVTMA 67

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A ++ + +G  IG      + I P      A P   F P++V       + P +  
Sbjct: 68  GFGLAIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIG-VGPAILT 126

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + L+   + + I+ N+  G +    + ++V        W     I LP   PY+      
Sbjct: 127 AFLI---SFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKV 183

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   A+  + VSE+           G+G  +  +           G++++    + +   
Sbjct: 184 AITLAFVGTTVSEM------TAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYEL 237

Query: 573 L 573
            
Sbjct: 238 F 238



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 89/242 (36%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL  V+++  +     G+ +   P  +            +  +A RT    ++   
Sbjct: 11  SPWLLLVAVILLWQVICAGFGVSDFIFPSPLRIWTQFWEFKEIIAGHAWRTFWVTMAGFG 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++   +   +   SR     + P++    ++P   F+   VV+F              
Sbjct: 71  LAIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGVGP-------- 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ 
Sbjct: 123 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLK 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +  L  +
Sbjct: 183 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYE 236

Query: 258 LL 259
           L 
Sbjct: 237 LF 238


>gi|229172973|ref|ZP_04300525.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus MM3]
 gi|228610493|gb|EEK67763.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus MM3]
          Length = 503

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  + +R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKQRMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKQRMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|197124494|ref|YP_002136445.1| binding-protein-dependent transporters inner membrane component
           [Anaeromyxobacter sp. K]
 gi|196174343|gb|ACG75316.1| binding-protein-dependent transport systems inner membrane
           component [Anaeromyxobacter sp. K]
          Length = 245

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 88/216 (40%), Gaps = 14/216 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + D +        L     R+  R+     IS+          A+S  +   L P
Sbjct: 25  PGPFAVADSIRAMAADGRLAAAVLRSLGRLAQGYAISIAVGVPLGVALARSALVQAALRP 84

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +   +Q++P + +L   V++F          +E A +F +    +  ++ +   ++  + 
Sbjct: 85  VTTGLQALPSICWLPLAVLWFGL--------SEAAIVFVVVMGSLLAVSIATEDAIAGVD 136

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   + +  + G +    + +P ++PG++  + +  S  W  ++A E++ V       
Sbjct: 137 PVLLRAAGTLGIRGPRFHLGVLLPAALPGILTGLKLGWSFAWRALMAGELLFVAG----- 191

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  +A   +  D   ++  M+ ++ +  L D++
Sbjct: 192 -GLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRV 226



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+     I+  + +P+G+ +     + + ++P    L A P+  + PL V       
Sbjct: 50  SLGRLAQGYAISIAVGVPLGVALARSALVQAALRPVTTGLQALPSICWLPLAVLWFGLSE 109

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +  +++ G+   +        +         A +  I G R+   ++LP   P 
Sbjct: 110 A----AIVFVVVMGSLLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLPAALPG 165

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       AW A +  E+           GLG  +A+  E     +V+  ++ +   
Sbjct: 166 ILTGLKLGWSFAWRALMAGELL------FVAGGLGQLLAQGRELLDAAQVMGVMVCIVAL 219

Query: 566 VLALNR 571
            + ++R
Sbjct: 220 GILVDR 225


>gi|312622576|ref|YP_004024189.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203043|gb|ADQ46370.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kronotskyensis 2002]
          Length = 253

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 93/221 (42%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  + +     LD + L      TT RM+   +ISLL   +      K   L   L P
Sbjct: 34  PSPVSVAETFIRLLDNNVLFIAIWATTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRP 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q++P + +L F ++++          +E A IF      ++++T ++   + N+ 
Sbjct: 94  LILGFQTLPSVCWLPFAILWYGL--------SEKAIIFVTAIGSLFSITLAVESGIKNVN 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +++    G   +  + +P S+P ++  M    S  +  ++A EM+         
Sbjct: 146 PLYIKAAKTMGAKGITLYLNVIIPASLPYVISGMKQGWSFAFRALMAGEML------FAT 199

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+  +    + ++ +F P+
Sbjct: 200 KGLGQVLMVGRDLADMSQVISVMIVTIVFGLVIEKAIFGPL 240



 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T  R+V+  +I+ +  I +G+ I     +   ++P        P+  + P  +
Sbjct: 52  LFIAIWATTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRPLILGFQTLPSVCWLPFAI 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  +   G+ + I   V +G       + + A +    G   +  +I
Sbjct: 112 LWYGLSEK----AIIFVTAIGSLFSITLAVESGIKNVNPLYIKAAKTMGAKGITLYLNVI 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY ++G       A+ A +  E+         T GLG  +    +     +V+  
Sbjct: 168 IPASLPYVISGMKQGWSFAFRALMAGEML------FATKGLGQVLMVGRDLADMSQVISV 221

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +++   F L + + ++ PL
Sbjct: 222 MIVTIVFGLVIEKAIFGPL 240


>gi|192289983|ref|YP_001990588.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283732|gb|ACF00113.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 94/242 (38%), Gaps = 10/242 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL    V       +        P   +  +   L    L      +   +L+  VI ++
Sbjct: 45  LLLLATVWEGYGRFVDNPLLVPTPSQTLLAMWDGLVGGELTVRIGNSLRVLLTGYVIGVV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  +LA  +R     L  +  +   +P +  L   +++F   +         + +F 
Sbjct: 105 LACLLTSLAVSNRFGRDALSVLTAMFNPLPAISLLPIALLWFGMGWG--------SLVFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +W M  +++     I   L    ++  L G +  W++ +P ++P ++  + +  +
Sbjct: 157 IVHAVMWPMALNVHTGFEGISPTLRMAGQNAGLRGLRYVWHILLPAALPSIISGLKLGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++ASEM+    +       G +I +     +   +   +LT++ +  L + L+FR
Sbjct: 217 FAWRTLIASEMVFGVSSGSGGI--GWFIFVNRNLMETANVFAGLLTVVLIGLLIESLIFR 274

Query: 262 PM 263
            +
Sbjct: 275 TL 276



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 16/280 (5%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  +     R    E  L +   Q     +    F ++         + +   +   T  
Sbjct: 10  RAVQGEAADRPIAAERQLSVWQRQFGRSWVHQAAFLLLLATVWEGYGRFVDNPLLVPTPS 69

Query: 375 DVLYVIWLGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             L  +W G +          ++  ++   +I  ++   +             +     +
Sbjct: 70  QTLLAMWDGLVGGELTVRIGNSLRVLLTGYVIGVVLACLLTSLAVSNRFGRDALSVLTAM 129

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               PA    P+ +        +    L  +++    W +  NV  G        +    
Sbjct: 130 FNPLPAISLLPIALLWFGMGWGS----LVFVIVHAVMWPMALNVHTGFEGISPTLRMAGQ 185

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +  + G R+  +I+LP   P  ++G       AW   I SE+             G +I 
Sbjct: 186 NAGLRGLRYVWHILLPAALPSIISGLKLGWAFAWRTLIASEMVFGVSSGSGGI--GWFIF 243

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +        V  G+L +    L +   ++  L     R 
Sbjct: 244 VNRNLMETANVFAGLLTVVLIGLLIESLIFRTLENATVRR 283


>gi|126650740|ref|ZP_01722956.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus sp. B14905]
 gi|126592405|gb|EAZ86423.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus sp. B14905]
          Length = 505

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 76/205 (37%), Gaps = 23/205 (11%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             A+  +++            +++   ++ +  ++Q+IP L  L  
Sbjct: 13  GQLLSALLEHIQISFIALFFAIIIAIPLGIYLTNKKKIAETIIGMSAVLQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+    +  +  + Y  +  +   L+E + +  ++  +
Sbjct: 73  LIPLFGIG--------KVPAIIALVVYALLPILRNTYTGIKEVDPSLKEAALAMGMNTPK 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAIK 234
           +   + +P ++P ++  +  +M           +++VG       I   G+G  I L I 
Sbjct: 125 RLLKVELPLALPVIMAGIRTAM-----------VLIVGTATLAALIGAGGLGDIILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +   I+   +    +  ++D LL
Sbjct: 174 RNNTALIILGAVPAAILALIFDVLL 198



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 12/194 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +  A II IP+GI++  +  I+  I   + +L   P+     L++           +
Sbjct: 27  FIALFFAIIIAIPLGIYLTNKKKIAETIIGMSAVLQTIPSLALLGLLIPLFGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G        KE A +  +   +    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIKEVDPSLKEAALAMGMNTPKRLLKVELPLALPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG  I    ++ +   ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAG-------GLGDIILLGIDRNNTALIILGAVPAAILALIFD 195

Query: 571 RFLWHPLYLYGTRC 584
             L   L     R 
Sbjct: 196 VLL-KKLESLSFRK 208


>gi|326693159|ref|ZP_08230164.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc argentinum KCTC 3773]
          Length = 508

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V        +   ++++      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIG----TVPAVIVLVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIP------- 65

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++     L P   IG   A I  +  + +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 66  SLALLGLLIPLVGIGTVPAVIVLVIYALL-PIFQNTYLGISEIDASIEEAADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|254555498|ref|YP_003061915.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           JDM1]
 gi|300767021|ref|ZP_07076934.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179499|ref|YP_003923627.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|254044425|gb|ACT61218.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           JDM1]
 gi|300495559|gb|EFK30714.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, substrate binding and permease
           protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308044990|gb|ADN97533.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 508

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEEAADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|91783461|ref|YP_558667.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|296157771|ref|ZP_06840605.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|91687415|gb|ABE30615.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
 gi|295892017|gb|EFG71801.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 274

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 13/211 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   V+   + + + + VG+W+   P  S+   P+ +   + P  +
Sbjct: 64  WFTGGEIYLHLWITLVETVLAFTLGTALGLGVGLWLALSPLASALFDPYIKAANSMPRVI 123

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G           A        +
Sbjct: 124 LAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANRKQ 179

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ LP    +  +   T+ G A+  S+V E            G+G  I ++      
Sbjct: 180 LLRFVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDI 233

Query: 553 PEVVLGVLIMCCFVLALNRFLW---HPLYLY 580
             V  G+L++  F L L+  +      L  +
Sbjct: 234 NTVFAGILVLTAFALILDAIVGMGERRLMKW 264



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 76/228 (33%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ ++  +        +  +   T +  + A  +            A S     +  P +
Sbjct: 54  PQKVLQRIWEWFTGGEIYLHLWITLVETVLAFTLGTALGLGVGLWLALSPLASALFDPYI 113

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               S+P +       V+F      KV        F +F        F++YQ +  +   
Sbjct: 114 KAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPV 165

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R    +  Q   ++ +P +M  +  ++  S+   +   V  E +          G
Sbjct: 166 VLANARMLGANRKQLLRFVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARG 219

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +G  I  A    D+  +   +L +     + D ++    R ++ W  K
Sbjct: 220 VGYLILQAEGTFDINTVFAGILVLTAFALILDAIVGMGERRLMKWQPK 267


>gi|61742865|gb|AAS78801.2| putative ABC transporter permease component [Paracoccus
           pantotrophus]
          Length = 275

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 90/216 (41%), Gaps = 17/216 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L Q+   +  R+L A  ++L        L   +R +  +L PI++  + +P L +L
Sbjct: 73  SNSTLVQHTLASLGRVLGAFFLALAVAVPVGILMGVNRVVRGLLDPIIEFYRPLPPLAYL 132

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++            E   +F IF +    M  +    + ++  +    + +   S 
Sbjct: 133 PLIIIWLGIG--------EFPKVFLIFLAIFAPMAIAARAGVRSVSIEQIHAAYAMGASK 184

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  +++ +  ++P +   M + +  GW  +VA+EM+          G+G  +  + +  
Sbjct: 185 LQVIFHVILKAALPEIFTGMRIGIGVGWTTLVAAEMVA------AHRGLGFMVLNSAEYL 238

Query: 237 DLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
              A++  ++ +  + F +D L+    R +I W  K
Sbjct: 239 ASDAVIMGIIVIGILAFAFDLLIRRIERALIPWKGK 274



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 91/278 (32%), Gaps = 26/278 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           + + + K       + +  P +      +   +  L   WF V      G+ W    ++ 
Sbjct: 1   MLDRLMKARPARPGVSYGAPGDGSSALISLATALALIALWFLVT-----GMGWVRPLFLP 55

Query: 369 NHFTYQDVL-----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           +                    ++     ++ RV+    +A  + +PVGI +G    +   
Sbjct: 56  SPAAVWGKFVLAATEGVSNSTLVQHTLASLGRVLGAFFLALAVAVPVGILMGVNRVVRGL 115

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  +     P   + PL++  +             L+       +     AG  +   
Sbjct: 116 LDPIIEFYRPLPPLAYLPLIIIWLGIG----EFPKVFLIFLAIFAPMAIAARAGVRSVSI 171

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +    A +   +  +   ++IL    P   TG     G  W   + +E+ +         
Sbjct: 172 EQIHAAYAMGASKLQVIFHVILKAALPEIFTGMRIGIGVGWTTLVAAEMVA------AHR 225

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           GLG  +  S E  +   V++G++++     A +  +  
Sbjct: 226 GLGFMVLNSAEYLASDAVIMGIIVIGILAFAFDLLIRR 263


>gi|83588972|ref|YP_428981.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83571886|gb|ABC18438.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 253

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 10/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      +++RVVV + +A ++ +P+G+W G    + S + P   LL   P     P
Sbjct: 54  WPELARHLYFSVYRVVVSLALALLLAVPLGLWAGRNRAVDSFLAPMVYLLYPVPKVALLP 113

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + +  +        + +  L+IF     IL      A   P+      +S        +R
Sbjct: 114 VAMVLLGIGD-GAKMLIIFLVIFN---QILITTRDAARKIPDQLLLSVASLGAGKASLFR 169

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +ILP   P  +T +  + G A +   +SE  +        +GLG +I +   +  +  +
Sbjct: 170 QVILPACLPDIITASRVSLGSAISVLFLSETIAG------NSGLGYFILDGLFRADYGAM 223

Query: 556 VLGVLIMCCFVLALNRFL 573
             G+L M    L L   L
Sbjct: 224 FAGILTMAGMGLVLYILL 241



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 91/235 (38%), Gaps = 14/235 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            + + G   +L  GI    +P   + +  +      L ++   +  R++ ++ ++LL   
Sbjct: 21  ILFLFGCWWLLARGINNPGLPEPRLALQGLARFWPELARHLYFSVYRVVVSLALALLLAV 80

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A ++R +   L P++ ++  +P +  L   +V           GA++  IF +  
Sbjct: 81  PLGLWAGRNRAVDSFLAPMVYLLYPVPKVALLPVAMVLLGIGD-----GAKMLIIFLVIF 135

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           +Q   +  +   +   IP  L     S        F  + +P  +P ++    +S+    
Sbjct: 136 NQ---ILITTRDAARKIPDQLLLSVASLGAGKASLFRQVILPACLPDIITASRVSLGSAI 192

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +  SE I          G+G +I   +   D  A+   +LTM G+  +   LL
Sbjct: 193 SVLFLSETIAGNS------GLGYFILDGLFRADYGAMFAGILTMAGMGLVLYILL 241


>gi|303326086|ref|ZP_07356529.1| taurine uptake ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302864002|gb|EFL86933.1| taurine uptake ABC transporter, permease protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 282

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 109/270 (40%), Gaps = 20/270 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDI-----VPITLDVHSLP 62
              +R  + +I   L F++V  +I    L G  +   P +++ +       +  D   L 
Sbjct: 26  ATAARENWISIVSFLVFLVVWELICRFDLIGPYQLVPPSEVITVFFEKLTDVNPDGTVLQ 85

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+A  +    L+  + +++             ++ +++ P+ D ++ IP + ++   +++
Sbjct: 86  QHALASLALALAGFLAAVVIGVPLGLFMGWYPKVNLLVRPLFDAIRPIPPIAWIPIAILW 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                         A  F IF +       + Y  +      L  V+  +  S ++ F  
Sbjct: 146 LGIGMT--------AKAFIIFLAAFVPCVINSYTGIRLTNPVLIRVAEIYGASNFETFRK 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +GVP ++P +   M +S++  W  +VA+E++          G+G  I    +      I+
Sbjct: 198 IGVPSAIPMIFTGMKLSLNAAWTTLVAAELLAASV------GLGFMIQQGRRLARPDIII 251

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
             MLT+  +  L   +L R    +++  RL
Sbjct: 252 VGMLTIGFLGALMSWILTRIEARFASSRRL 281



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 86/257 (33%), Gaps = 30/257 (11%)

Query: 348 WFCVVCGVAIGIAWQS-----IGYIVNHFTYQDVLYVIWLGCITM--------------- 387
           W  +V  +   + W+      +          +V+ V +     +               
Sbjct: 33  WISIVSFLVFLVVWELICRFDLIGPYQLVPPSEVITVFFEKLTDVNPDGTVLQQHALASL 92

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +   + A +I +P+G+++G+ P ++  ++P    +   P   + P+ +  +      
Sbjct: 93  ALALAGFLAAVVIGVPLGLFMGWYPKVNLLVRPLFDAIRPIPPIAWIPIAILWLGIG--- 149

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                + ++        + N   G          VA  +  + +  +R I +P   P   
Sbjct: 150 -MTAKAFIIFLAAFVPCVINSYTGIRLTNPVLIRVAEIYGASNFETFRKIGVPSAIPMIF 208

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG   +   AW   + +E+ +       + GLG  I +         +++G+L +     
Sbjct: 209 TGMKLSLNAAWTTLVAAELLA------ASVGLGFMIQQGRRLARPDIIIVGMLTIGFLGA 262

Query: 568 ALNRFLWHPLYLYGTRC 584
            ++  L      + +  
Sbjct: 263 LMSWILTRIEARFASSR 279


>gi|270292233|ref|ZP_06198447.1| choline transporter [Streptococcus sp. M143]
 gi|270279279|gb|EFA25122.1| choline transporter [Streptococcus sp. M143]
          Length = 508

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   + +    P+     L +  +    L     L +  
Sbjct: 35  AIFIAIPLAVYLRYHEKLADWVLQISGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 94

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 95  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 150

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 151 IIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFLL 200



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 15/181 (8%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 35  AIFIAIPLAVYLRYHEKLADWVLQISGIFQTIPSLALL--------GLFIPLMGIGTLPA 86

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 87  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRT 146

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +          + +I  G       G+GS+I L I   +   IL   L+   +   ++ L
Sbjct: 147 AAVLIIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFL 199

Query: 259 L 259
           L
Sbjct: 200 L 200


>gi|108802310|ref|YP_642507.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871463|ref|YP_941415.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126438292|ref|YP_001073983.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772729|gb|ABG11451.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697552|gb|ABL94625.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126238092|gb|ABO01493.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 263

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 79/239 (33%), Gaps = 15/239 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            WF V               +     Y      +     ++  +   + IA ++ +  G+
Sbjct: 28  AWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEGLANIRASLTTLSAGLAIAVVVGVAAGL 87

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            IG  P +   + P  +   A P+    P  +                L+  G  W +L 
Sbjct: 88  VIGQLPIVEKTVSPTLEFARAIPSTALIPFAMMLFGVSP----EMKIFLIALGCVWPVLL 143

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +   GA    +       +F+ITG +   Y++LP + P  + G   A   +    + SE+
Sbjct: 144 STADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVLPRVLVGVRIAIPLSLILMVTSEM 203

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                     TGLG  I ++        +  G+L++      +       LY    R L
Sbjct: 204 VG------ARTGLGFVITQAQATFQLLTMWSGILVLGILGFLMT-----FLYALAERRL 251



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 17/182 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             +   +   + P L+  ++IP    + F ++ F          +    IF I    VW 
Sbjct: 89  IGQLPIVEKTVSPTLEFARAIPSTALIPFAMMLFGV--------SPEMKIFLIALGCVWP 140

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  S       +   +    R+F ++G Q+ WY+ +P  +P ++  + +++      +V 
Sbjct: 141 VLLSTADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVLPRVLVGVRIAIPLSLILMVT 200

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
           SEM+          G+G  I  A     LL +   +L +  + FL      L  R ++ W
Sbjct: 201 SEMVGART------GLGFVITQAQATFQLLTMWSGILVLGILGFLMTFLYALAERRLLRW 254

Query: 267 SN 268
            +
Sbjct: 255 CD 256


>gi|332702706|ref|ZP_08422794.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552855|gb|EGJ49899.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 256

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             + FR V  +++A +I  P+GI +G    I + + PF  L    P  V  P+ +  +  
Sbjct: 61  GASAFRAVSAMLLAWLIAFPLGILMGGSRRIDALLSPFVSLTYPIPKIVLLPIFLLLLGL 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    ++L++     + IL     G     +   +  +S      R +  ++LP   
Sbjct: 121 GDASKIAMIALIL----AYQILVTTRDGVRGVHHKHIDSVTSLGAGKLRVFLDVLLPAAL 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+  T      G +       E  +        TGLG  I +S     +  +  G+  M 
Sbjct: 177 PHGFTALRLGTGVSVAVLFFVESFA------TQTGLGYLIIDSWGSLDYLRMFSGIFGMS 230

Query: 564 CFVLAL 569
              + L
Sbjct: 231 LLGVLL 236



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           + G      P   +          +  ++   +  R +SAM+++ L  F    L   SRR
Sbjct: 31  VLGSSVLPPPEAALAAFSRDALTAAFWRHFGASAFRAVSAMLLAWLIAFPLGILMGGSRR 90

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  +L P + +   IP +          + ++   +   + + I  I     + +  +  
Sbjct: 91  IDALLSPFVSLTYPIPKIV--------LLPIFLLLLGLGDASKIAMIALILAYQILVTTR 142

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +     +   S      + F  + +P ++P     + +        +   E    
Sbjct: 143 DGVRGVHHKHIDSVTSLGAGKLRVFLDVLLPAALPHGFTALRLGTGVSVAVLFFVESFA- 201

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
                   G+G  I  +    D L +   +  M  +  L      LL R +  W
Sbjct: 202 -----TQTGLGYLIIDSWGSLDYLRMFSGIFGMSLLGVLLYEGTDLLERLVCAW 250


>gi|302524982|ref|ZP_07277324.1| choline ABC transporter, permease [Streptomyces sp. AA4]
 gi|302433877|gb|EFL05693.1| choline ABC transporter, permease [Streptomyces sp. AA4]
          Length = 294

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 91/237 (38%), Gaps = 16/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L + +++ +   L   ++             +   +   P  A +T  ++L + V+++ 
Sbjct: 54  WLPWPVLVVVFAGLGWWLRGWKFGLGSAIGFALIDSLREFPS-AMQTLSQVLISGVVAVA 112

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA++  +  ++ P+LD MQ++P   +L   + +F     G V G     +F+
Sbjct: 113 IAVPVGIAAARNETVSRIVRPVLDFMQTLPAFVYLIPVIFFFS---IGPVPGVVATVVFS 169

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +               +  +  ++ E   +F     +    + +P +MP ++  +   + 
Sbjct: 170 LPPG-----VRLTELGIRQVDPEMVEAGEAFGSPPRRILREIQIPLAMPSIMAGINQIIM 224

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                VV S M+         PG+G+ +  A+    L     A L ++ +    D+L
Sbjct: 225 LSLSMVVISGMV-------GAPGLGAEVYAAVTSLKLDLGFNAGLGVVVLAIYLDRL 274



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 81/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIA 397
            L    + V+  V  G+ W   G+         F   D L        T+ +V++  ++A
Sbjct: 51  GLTWLPWPVLVVVFAGLGWWLRGWKFGLGSAIGFALIDSLREFPSAMQTLSQVLISGVVA 110

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I +PVGI       +S  ++P    +   PA V+    +  + ++ + P   +   ++
Sbjct: 111 VAIAVPVGIAAARNETVSRIVRPVLDFMQTLPAFVYL---IPVIFFFSIGPVPGVVATVV 167

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           F +    +     G      +  E   +F     R  R I +P   P  + G       +
Sbjct: 168 F-SLPPGVRLTELGIRQVDPEMVEAGEAFGSPPRRILREIQIPLAMPSIMAGINQIIMLS 226

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  ++S +           GLGA +  +             L +    + L+R 
Sbjct: 227 LSMVVISGMVG-------APGLGAEVYAAVTSLKLDLGFNAGLGVVVLAIYLDRL 274


>gi|28377282|ref|NP_784174.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           WCFS1]
 gi|28270113|emb|CAD63013.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Lactobacillus plantarum
           WCFS1]
          Length = 508

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEEAADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|217978592|ref|YP_002362739.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217503968|gb|ACK51377.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 270

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 92/229 (40%), Gaps = 19/229 (8%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P  I       +           +    L  + I       +  +         +L  
Sbjct: 56  PMPSQIPRAWLDEISGGFWLAAVKNSLSHYLIGVAIGSSLGVAFGLVCGVLPWFEALLSG 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +++ IP L ++ F +++F          +  AA F I  +  W   ++ + ++  I 
Sbjct: 116 LVRLLRPIPGLAWVPFAILWFGL--------SSTAAAFVIAIAVFWINFYAAFGAVQAID 167

Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           RDL EV+R+F   G + + + + +P + PG++  +   +   W  VVA+E+  V      
Sbjct: 168 RDLMEVARAFGHGGFFGRLFKIALPAATPGILAGVRTGLGQAWMSVVAAELFGV------ 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
            PGIG+ +  A        ++  MLTM  +  + D L   + R +  W 
Sbjct: 222 -PGIGARMMQAASLLATDLVVVYMLTMALLYAITDILFVAVRRRLTAWQ 269



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 17/219 (7%)

Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +      ++    WL  +  ++   ++ + I S + +  G+  G  P   + +    +LL
Sbjct: 61  IPRAWLDEISGGFWLAAVKNSLSHYLIGVAIGSSLGVAFGLVCGVLPWFEALLSGLVRLL 120

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P   + P  +             +++ +     W   +       A   D  EVA +
Sbjct: 121 RPIPGLAWVPFAILWFGLSSTAAAFVIAIAV----FWINFYAAFGAVQAIDRDLMEVARA 176

Query: 486 FHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           F   G +     I LP   P  + G  T  G AW + + +E+           G+GA + 
Sbjct: 177 FGHGGFFGRLFKIALPAATPGILAGVRTGLGQAWMSVVAAELFG-------VPGIGARMM 229

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYLY 580
           ++    +   VV+ +L M       +         L  +
Sbjct: 230 QAASLLATDLVVVYMLTMALLYAITDILFVAVRRRLTAW 268


>gi|146317872|ref|YP_001197584.1| ABC transporter [Streptococcus suis 05ZYH33]
 gi|146320062|ref|YP_001199773.1| ABC transporter [Streptococcus suis 98HAH33]
 gi|253751110|ref|YP_003024251.1| binding-protein-dependent transport system protein [Streptococcus
           suis SC84]
 gi|253753011|ref|YP_003026151.1| binding-protein-dependent transport system protein [Streptococcus
           suis P1/7]
 gi|253754834|ref|YP_003027974.1| binding-protein-dependent transport system protein [Streptococcus
           suis BM407]
 gi|145688678|gb|ABP89184.1| putative ABC-transport protein, membrane component [Streptococcus
           suis 05ZYH33]
 gi|145690868|gb|ABP91373.1| putative ABC-transport protein, membrane component [Streptococcus
           suis 98HAH33]
 gi|251815399|emb|CAZ50972.1| binding-protein-dependent transport system protein [Streptococcus
           suis SC84]
 gi|251817298|emb|CAZ55028.1| binding-protein-dependent transport system protein [Streptococcus
           suis BM407]
 gi|251819256|emb|CAR44529.1| binding-protein-dependent transport system protein [Streptococcus
           suis P1/7]
 gi|292557662|gb|ADE30663.1| Binding-protein-dependent transport systems inner membrane
           component [Streptococcus suis GZ1]
          Length = 254

 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 80/241 (33%), Gaps = 23/241 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------------DVLYVIWLGCITMFRVVV 392
            FW      VA+ I W    Y     ++              D  ++      ++  V  
Sbjct: 11  YFWLTFSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFF 70

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
                 ++  P  + + +     + ++P+ Q +   P   + PLVV       L      
Sbjct: 71  GFTSGFLLSAPNALLMAWYSPYRNIVKPWIQFIRNIPPLAYVPLVVISAGVGLLPQ---- 126

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++   T   +   +  G      +  + A     + +  ++ I++P   P+ +T    
Sbjct: 127 VIVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPSSIPFIMTAVRL 186

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               +    I +E          T+G+G  I           ++L ++++    L LN+ 
Sbjct: 187 GTSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKL 240

Query: 573 L 573
           +
Sbjct: 241 V 241



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 17/253 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F L+  +++   ++      +       + + + I +D   + +    +   +       
Sbjct: 16  FSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFFGFTSG 75

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L +   A L A       ++ P +  +++IP L ++   V+              L  +
Sbjct: 76  FLLSAPNALLMAWYSPYRNIVKPWIQFIRNIPPLAYVPLVVISAGVGL--------LPQV 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I  +    MT ++YQ + NI  +L + +R    S ++ F  + VP S+P ++  + + 
Sbjct: 128 IVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPSSIPFIMTAVRLG 187

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
            S     ++A+E      +     G+G  I       D   +L  ++ +  +  L +   
Sbjct: 188 TSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKLV 241

Query: 257 QLLFRPMIVWSNK 269
            L+ R +  W  K
Sbjct: 242 DLIERKLTGWQQK 254


>gi|307729436|ref|YP_003906660.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307583971|gb|ADN57369.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 280

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +            L      +  R+L   V   L   +       SR     ++
Sbjct: 61  LPPPARVYATFVDLAQSGDLLHNTLISLQRVLCGFVAGTLGGLLLGAALGLSRTFEAYVL 120

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K I         I  + +   T S  Q   N+
Sbjct: 121 PSFNAIVQIPVLGWLPFLLLLVGVGEPLKYI--------LIAHAALVPATLSTLQGFRNV 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L E SR F  + WQ+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 173 PVTLIEASRVFGYTRWQRIVHVVLPCAVPTLATGVRLAFTKAWLALVVVELVASSE---- 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ A++ +  + F  ++ L
Sbjct: 229 --GLGYLIVYGRQLFQLDLVMAAVVIVGAIGFAINRAL 264



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 15/216 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   ++    I++ RV+   +  ++  + +G  +G      + + P    +   P 
Sbjct: 72  VDLAQSGDLLHNTLISLQRVLCGFVAGTLGGLLLGAALGLSRTFEAYVLPSFNAIVQIPV 131

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             + P ++  V            +L+          + + G    P    E +  F  T 
Sbjct: 132 LGWLPFLLLLVGVG----EPLKYILIAHAALVPATLSTLQGFRNVPVTLIEASRVFGYTR 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+   +++LP   P   TG   A   AW A +V E+ +       + GLG  I    +  
Sbjct: 188 WQRIVHVVLPCAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLF 241

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
               V+  V+I+     A+NR L         R LR
Sbjct: 242 QLDLVMAAVVIVGAIGFAINRAL-----DALERRLR 272


>gi|42781378|ref|NP_978625.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Bacillus cereus ATCC 10987]
 gi|42737300|gb|AAS41233.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Bacillus cereus ATCC 10987]
          Length = 503

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHGLIILGAVPAALLALFFDVVLRVLERP 204



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHGLIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|167570002|ref|ZP_02362876.1| hypothetical protein BoklC_09168 [Burkholderia oklahomensis C6786]
          Length = 310

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 96/250 (38%), Gaps = 12/250 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQYASRTTLRMLSAMVIS 79
           L+A VL+ G          +  +P      +    DV +  LP   + +   +L    + 
Sbjct: 65  LIALVLIAGWEFAARAIDNDLLLPSFSATALAFAHDVANGELPAKIAASLSVLLRGYALG 124

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +   F   TLA  +R    +L  +  +   +P +  L   +++F             + +
Sbjct: 125 VACAFALTTLAVTTRAGRDLLTMLTAMFNPLPSIALLPLALLWFGLGTG--------SLL 176

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  + +W +  + +     +P  L  V R++ L+G +    + +P ++P ++  + + 
Sbjct: 177 FVLVHAVLWPLALNTFAGFQAVPATLRMVGRNYGLTGLRHVVAILIPAALPSILAGLRVG 236

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  W  ++A+E++            G YI     E     +   +  ++ +  + +  +
Sbjct: 237 WAFAWRTLIAAELVFGASAGGGGL--GWYIFRNRNELYTDRVFAGLAAVIVIGLIVEHGV 294

Query: 260 FRPMIVWSNK 269
           F  +   + K
Sbjct: 295 FDALERATVK 304



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 6/201 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++  ++    +       +             +     +    P+    PL +     
Sbjct: 111 AASLSVLLRGYALGVACAFALTTLAVTTRAGRDLLTMLTAMFNPLPSIALLPLALLWFGL 170

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L  +++    W +  N  AG  A P   + V  ++ +TG R    I++P   
Sbjct: 171 GTGS----LLFVLVHAVLWPLALNTFAGFQAVPATLRMVGRNYGLTGLRHVVAILIPAAL 226

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       AW   I +E+             G YI  +  +     V  G+  + 
Sbjct: 227 PSILAGLRVGWAFAWRTLIAAELVFGASAGGGGL--GWYIFRNRNELYTDRVFAGLAAVI 284

Query: 564 CFVLALNRFLWHPLYLYGTRC 584
              L +   ++  L     + 
Sbjct: 285 VIGLIVEHGVFDALERATVKR 305


>gi|284048224|ref|YP_003398563.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
 gi|283952445|gb|ADB47248.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
          Length = 247

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 95/248 (38%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L F+L        +        P  + + +   +    L ++   +  R+++    + L
Sbjct: 12  VLVFLLWEWAAAEGIWSSYILPSPGRVGETLCHMIQNGELVRHILISLRRIVTGFFWAFL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            + + ++L     R+      +L++ + +P L  +   +++F           EL     
Sbjct: 72  SSCLLSSLNLLFPRIRDCYAGLLEVFRHVPPLSLIPLLILWFGIG--------ELPKTII 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + M  +M        R L EV R    S WQ  W + +P ++PG++  + + M 
Sbjct: 124 IVLASFFPMYLNMDDGFRRCDRKLLEVGRMLCFSPWQSLWKIRLPSALPGILTGLRVGMG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
                ++ +EMI          G+G  I  A        +   +LT+  +  + D    L
Sbjct: 184 YSLRAIIGAEMIAADS------GLGYLILDAQAMSRSDKVFIGILTIGALGLVLDGIFAL 237

Query: 259 LFRPMIVW 266
           + R ++ W
Sbjct: 238 VERKVLYW 245



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++ R+V     A +    +       P I        ++    P     PL
Sbjct: 49  GELVRHILISLRRIVTGFFWAFLSSCLLSSLNLLFPRIRDCYAGLLEVFRHVPPLSLIPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L      +++++  + + +  N+  G         EV      + W+    
Sbjct: 109 LILWFGIGELPK----TIIIVLASFFPMYLNMDDGFRRCDRKLLEVGRMLCFSPWQSLWK 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LP   P  +TG     G +  A I +E+ +        +GLG  I ++       +V 
Sbjct: 165 IRLPSALPGILTGLRVGMGYSLRAIIGAEMIA------ADSGLGYLILDAQAMSRSDKVF 218

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L +    L L+   
Sbjct: 219 IGILTIGALGLVLDGIF 235


>gi|225868507|ref|YP_002744455.1| glycine betaine ABC transporter permease and substrate binding
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701783|emb|CAW99188.1| putative glycine betaine ABC transporter permease and substrate
           binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 510

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 15/178 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L +KS+R   +++ +  + Q+IP L  L         L+   +      A+ A
Sbjct: 36  IGIPLAALLSKSKRWSNIILQLTGVFQTIPSLALL--------GLFIPLMGIGTAPAVTA 87

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  +    L  I   L E   +F ++ W++     +P +MP ++  +  S  
Sbjct: 88  LVIYAIFPILQNTITGLNAIDPSLVEAGTAFGMTKWERLKIFEIPIAMPVIMSGVRTSAV 147

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   + +I  G       G+G++I L I   +   I+   ++   +  +++ LL
Sbjct: 148 MIIGTATLASLIGAG-------GLGTFILLGIDRNNAQLIVIGAVSSALLAIVFNSLL 198



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I IP+   +      S+ I     +    P+     L +  +          L +  IF 
Sbjct: 36  IGIPLAALLSKSKRWSNIILQLTGVFQTIPSLALLGLFIPLMGIGTAPAVTALVIYAIF- 94

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL N I G +A      E  ++F +T W   +   +P   P  ++G  T+      
Sbjct: 95  ---PILQNTITGLNAIDPSLVEAGTAFGMTKWERLKIFEIPIAMPVIMSGVRTSAVMIIG 151

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++ +   G       GLG +I    ++ +   +V+G +      +  N  L
Sbjct: 152 TATLASLIGAG-------GLGTFILLGIDRNNAQLIVIGAVSSALLAIVFNSLL 198


>gi|229178648|ref|ZP_04306012.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           172560W]
 gi|228604806|gb|EEK62263.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           172560W]
          Length = 503

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|229069808|ref|ZP_04203091.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           F65185]
 gi|228713343|gb|EEL65235.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           F65185]
          Length = 503

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|126740067|ref|ZP_01755757.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718886|gb|EBA15598.1| glycine betaine/proline ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 679

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 86/628 (13%), Positives = 203/628 (32%), Gaps = 85/628 (13%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQY 64
           +    +S  +    + L +      I + +  G +   V    +  + + L +       
Sbjct: 64  LFSTLMSYPMTGANWLLASIPWPFLIASAVALGWRLGGVKMAAMAAIGLGLVLLSGYWPE 123

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +  ++ ++L+       LA +  R+   +  +LDIMQ++P   +LT  +V F 
Sbjct: 124 GMNTLALVAVSVPLALVAGAAIGILANEYPRVREPVQALLDIMQTVPTFAYLTPLLVLFG 183

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G V+G   +AI+A        M  ++   L  +  +++E +     +  Q+ + + 
Sbjct: 184 F---GPVVGLIASAIYA-----APPMARNVLLGLQRVEAEVKEAAVMSGGTRMQQLFQVE 235

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +   +      V+ + +I           IG  + L +++    A + A
Sbjct: 236 LPAARLQIMVGVNQCLMAALSMVIIAAVIGGFQD------IGWEVLLTMRKAQFGAAMMA 289

Query: 245 MLT--------------------------------MLGVIFLYDQL----------LFRP 262
            +                                 ++G++     L          +  P
Sbjct: 290 GMVIVIFAILIDRMSGTLAEDRRQFWDGRISIGILIVGLVISLSFLSTMGDPGSYQVLDP 349

Query: 263 MIVWSNKFRLERTTGIYPADSWVLY-------LFRKTNFLRFIGYSSWNF-----FSPLS 310
           +  W + +    TT      + +         L  +    + I   +W F      S   
Sbjct: 350 VADWLDAWLTSFTTANAALLTALKNGILFYVLLPLRIGLDQAILPFTWGFQWTTGMSLGF 409

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V  +      +     +  + L     +   +    +  V      ++W + G  +  
Sbjct: 410 FAVSGVLAATLALSGRLTQGLVLLILAGILETGVSQLPWPFVLAAVGALSWVAGGRRLML 469

Query: 371 FTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +   +  +++ G      ++++     +   +++   +G+     P     ++P   +L
Sbjct: 470 LSVVLLSTILFSGLWERALLSLYLSGAAVFACALLGGAIGLISAVSPLAWRVVRPICDML 529

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P  VF   V+        +  L +    I     Y       G    P++  E A +
Sbjct: 530 QTIPLFVFLIPVLMVFQIGEFSAFLAIIAYAIVPMIRY----TRQGLIDTPDEMMEGAIA 585

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T W+  + +  P   P  + G       A+   +++ +         TTGLG  I  
Sbjct: 586 SGATTWQILKDVRAPYAAPTILLGLNQTILYAFAMLVIAALIG-------TTGLGQSIYL 638

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  +      +     M    L  +R +
Sbjct: 639 ALGQADVGLGISAGAAMAILALISDRIV 666


>gi|33591953|ref|NP_879597.1| hypothetical protein BP0780 [Bordetella pertussis Tohama I]
 gi|33571597|emb|CAE41086.1| putative membrane protein [Bordetella pertussis Tohama I]
 gi|332381370|gb|AEE66217.1| hypothetical protein BPTD_0781 [Bordetella pertussis CS]
          Length = 260

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 91/255 (35%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P I  ++  +L    I I          P  +++ + I         +   T    + 
Sbjct: 9   LYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNTLRIGYVEGQYWPHFLFTLQSTVY 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I      V  T+ A+S      + P +  +QS P +      +V+F      KV+  
Sbjct: 69  GYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASKVVMV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L + F         M  +    +      + ++ ++F+ S    F+++ +P +   +  
Sbjct: 129 ALMSFF--------PMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFA 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S+       V SE I          G+G  I  A    D+  +   + +++ +   
Sbjct: 181 GLQISVVLSLIGAVVSEFISSSQ------GLGYLIQSASVNMDVATMFACLFSLVVIGLT 234

Query: 255 ---YDQLLFRPMIVW 266
                + L R ++ W
Sbjct: 235 GTNLIRFLHRKLVFW 249



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 83/248 (33%), Gaps = 15/248 (6%)

Query: 340 VSYMLDIFWFCVVCGVAI-GIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIA 397
              +L I WF  +   ++      +   ++N      V    W     T+   V   +I 
Sbjct: 14  TGVVLVILWFASIRIFSVPNYLLPTPEAVLNTLRIGYVEGQYWPHFLFTLQSTVYGYLIG 73

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             + + VG  +         I P+   L + P     PL++    +   +      +++ 
Sbjct: 74  CGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASK----VVMVA 129

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + + +  N + G         ++  +F  +    + ++ LP    +   G   +   +
Sbjct: 130 LMSFFPMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFAGLQISVVLS 189

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVLALNRFLW 574
              ++VSE  S       + GLG  I  ++       +      ++++      L RFL 
Sbjct: 190 LIGAVVSEFIS------SSQGLGYLIQSASVNMDVATMFACLFSLVVIGLTGTNLIRFLH 243

Query: 575 HPLYLYGT 582
             L  +  
Sbjct: 244 RKLVFWEQ 251


>gi|284031071|ref|YP_003381002.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283810364|gb|ADB32203.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 259

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 10/223 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W+  +    I          V     +   Y++    +++   +    +A  + +P+ +
Sbjct: 28  LWWLTIVVFGIEQFLLPTPKDVVLRFLEQPGYLLQQTWVSLVESLAGFALAIALGVPIAL 87

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            I     +   + P    + A P     PL+V  + +    P + ++LL+ F   + I+ 
Sbjct: 88  LIVRSAILERLVYPLLLAVNAIPKIAIAPLLVVWMGFGQF-PKMAMALLVCF---FPIVI 143

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +   G  + P +  E+  S   +  + +  +      P   TG   A   A   S++ E 
Sbjct: 144 STAQGMKSTPAELVELLRSLKASKTQEFFKLRFTYALPQIFTGLKVAISLAVIGSVIGEF 203

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A        T GLG  I  S      P     + ++    + L
Sbjct: 204 AG------STEGLGYVIWNSGASADTPLAFAAIGLLSLMSIVL 240



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 93/229 (40%), Gaps = 14/229 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           + +  + I++ GI++  +P     ++        L Q    + +  L+   +++      
Sbjct: 26  IALWWLTIVVFGIEQFLLPTPKDVVLRFLEQPGYLLQQTWVSLVESLAGFALAIALGVPI 85

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A L  +S  L  ++ P+L  + +IP +      VV+       K+  A L   F      
Sbjct: 86  ALLIVRSAILERLVYPLLLAVNAIPKIAIAPLLVVWMGFGQFPKMAMALLVCFF------ 139

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +  S  Q + + P +L E+ RS + S  Q+F+ L   +++P +   + +++S     
Sbjct: 140 --PIVISTAQGMKSTPAELVELLRSLKASKTQEFFKLRFTYALPQIFTGLKVAISLA--- 194

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           V+ S   V+G+      G+G  I  +    D      A+  +  +  + 
Sbjct: 195 VIGS---VIGEFAGSTEGLGYVIWNSGASADTPLAFAAIGLLSLMSIVL 240


>gi|226945178|ref|YP_002800251.1| ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226720105|gb|ACO79276.1| ABC transporter permease protein [Azotobacter vinelandii DJ]
          Length = 331

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   +      + + +   +++ S+     G+ IG+   I   + P  ++L   P+   
Sbjct: 125 EDWPRLAESLLHSFWLLFNGVLLGSLCGFLAGVSIGWSQRIGYWLHPVLRILGPVPSTAL 184

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+                  L+   T + +     +G ++    + +VA +   +    
Sbjct: 185 LPICFFIFPSSWG----ASVFLIALATWFPVTVLTWSGVASVDRAYYDVARTLGASERFL 240

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P+   G     G +++  +V+E+           GLG Y+  +    ++ 
Sbjct: 241 IFRVAIPAALPHVFVGLFMGFGASFSVLVVAEMMG------VKAGLGWYLQWAQGWAAYA 294

Query: 554 EVVLGVLIMCCF 565
            +   +L+M   
Sbjct: 295 NMYAALLVMALL 306



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L +    +   + + +++  L  F+       S+R+G  L P+L I+  +P    L
Sbjct: 126 DWPRLAESLLHSFWLLFNGVLLGSLCGFLAGVSIGWSQRIGYWLHPVLRILGPVPSTALL 185

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A++F I  +  + +T   +  + ++ R   +V+R+   S 
Sbjct: 186 PICFFIF--------PSSWGASVFLIALATWFPVTVLTWSGVASVDRAYYDVARTLGASE 237

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P ++P +   + M     +  +V +EM+ V        G+G Y+  A    
Sbjct: 238 RFLIFRVAIPAALPHVFVGLFMGFGASFSVLVVAEMMGVKA------GLGWYLQWAQGWA 291

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               +  A+L M  +       LF
Sbjct: 292 AYANMYAALLVMALLCSGLITALF 315


>gi|86361123|ref|YP_473010.1| glycine betaine/L-proline ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86285225|gb|ABC94283.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 282

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 90/234 (38%), Gaps = 16/234 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
              +  I + L G +   V    +  V + L     L      T   +L+A VI+L    
Sbjct: 51  PFYVIAIIVALIGWRLVNVWFAALSGVALALCFSMGLWPETMSTLALVLTATVIALAIGI 110

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A     L   + P LD++Q++P   +L   +                 A+ A   
Sbjct: 111 PIGIAAGFFTALDRFMEPGLDLIQTLPPYIYLLPAIALLGYG--------PATALIATVI 162

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V          +   P++  E+  +  ++  + F+ + +PF++P ++  +  S+   +
Sbjct: 163 VAVPPAVRLTSLGIRMTPKEFIELGEALGMTPGKMFFKIRLPFALPSMMAGINQSLMMAF 222

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             VV + ++  G       G+G  I  AI+  D+   + A + ++ +  + D++
Sbjct: 223 GMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINAAIAIVVLTMVIDRI 269



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 87/238 (36%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           + ++L++  F V+  +   I W+ +       +   +     +G       T+  V+   
Sbjct: 43  ILWLLELPPFYVIAIIVALIGWRLVNVWFAALSGVALALCFSMGLWPETMSTLALVLTAT 102

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA  I IP+GI  GF   +   ++P   L+   P  ++    ++ + Y      +   +
Sbjct: 103 VIALAIGIPIGIAAGFFTALDRFMEPGLDLIQTLPPYIYLLPAIALLGYGPATALIATVI 162

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    P +F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 163 V----AVPPAVRLTSLGIRMTPKEFIELGEALGMTPGKMFFKIRLPFALPSMMAGINQSL 218

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A+   +++ +   G       GLG  I  +         +   + +    + ++R 
Sbjct: 219 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINAAIAIVVLTMVIDRI 269


>gi|148656880|ref|YP_001277085.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148568990|gb|ABQ91135.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 275

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 22  LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L   +LV   + I+  +       P  ++  +   L   +L ++ + T    LS   I+L
Sbjct: 39  LALVLLVWQTVVIVQDYPPFILPAPTLVIQRLATELAGETLQRHITITLSAALSGFSIAL 98

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
             +     L A++R    VL P+L   Q++PI+      V++       +V+ A L   F
Sbjct: 99  ALSLSLGYLLARTRTFDRVLTPLLAASQAVPIVAVAPLIVLWVGVGLESRVLVATLVTFF 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I ++ +         +  ++PR+L +++R    + W    Y+  P ++PG+   +   +
Sbjct: 159 PILSATI--------VAFRSVPRELIDMARISGANRWHLLRYVEAPLALPGIFGGVKAGL 210

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +      V  E I   D      G+G+ I +A    D   +  A+  + G+
Sbjct: 211 ALATTGAVVGEFIGGRD------GLGALINIARGLFDTPLMFVALTVLAGI 255



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 10/181 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   +    IA  + + +G  +         + P      A P     PL+V  V   
Sbjct: 85  ITLSAALSGFSIALALSLSLGYLLARTRTFDRVLTPLLAASQAVPIVAVAPLIVLWVGVG 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  L  +L+    T + IL   I    + P +  ++A       W   RY+  P   P
Sbjct: 145 LESRVLVATLV----TFFPILSATIVAFRSVPRELIDMARISGANRWHLLRYVEAPLALP 200

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G       A   ++V E            GLGA I  +      P + + + ++  
Sbjct: 201 GIFGGVKAGLALATTGAVVGEFIGGRD------GLGALINIARGLFDTPLMFVALTVLAG 254

Query: 565 F 565
            
Sbjct: 255 I 255


>gi|33593811|ref|NP_881455.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|33563884|emb|CAE43140.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|332383213|gb|AEE68060.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis CS]
          Length = 260

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 14/238 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVG 405
           ++               +  ++       V    W     T+  + +  +        +G
Sbjct: 22  WFIANRYLGVPYYVLPPVEGVLAALYRGYVQGDFWGDFGFTLASMAIGYVGGCTAAFIIG 81

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +       +   + PF   L + P     PL++    +   +  + ++L+      + + 
Sbjct: 82  VLFAEYRWLERLLYPFVLALQSMPKVALAPLILVWFGFGLESKAIMVALV----CFFPMF 137

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G  A      ++  +F  + W     I +P    +       +       ++V+E
Sbjct: 138 INTAVGLEATDPALLDLMRAFSASRWHILTRIKIPSAASHIFAALQISVVLGLIGAVVAE 197

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA---LNRFLWHPLYLY 580
             S       + GLG  I  +T       +   ++ +    +A   L R L   L  +
Sbjct: 198 FVS------SSKGLGYLINAATTTLDTSTMFAALISLAVLGIAGSQLIRVLHRKLVFW 249



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
                    T   M    V      F+   L A+ R L  +L P +  +QS+P +     
Sbjct: 53  GDFWGDFGFTLASMAIGYVGGCTAAFIIGVLFAEYRWLERLLYPFVLALQSMPKVALAPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+F      K I   L   F         M  +    L      L ++ R+F  S W 
Sbjct: 113 ILVWFGFGLESKAIMVALVCFF--------PMFINTAVGLEATDPALLDLMRAFSASRWH 164

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +   +   + +S+  G    V +E +          G+G  I  A    D 
Sbjct: 165 ILTRIKIPSAASHIFAALQISVVLGLIGAVVAEFVSSSK------GLGYLINAATTTLDT 218

Query: 239 LAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +  A++++  +        ++L R ++ W
Sbjct: 219 STMFAALISLAVLGIAGSQLIRVLHRKLVFW 249


>gi|297617206|ref|YP_003702365.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297145043|gb|ADI01800.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 250

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 104/238 (43%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +    LV  I+++++        P   +  +   +   +  Q    T  R L+  ++S L
Sbjct: 15  IFFLFLVWKILSLVIGAEIILPAPETTMRDLVNAVRSAAFWQSVEATVYRGLAGFLVSCL 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   LA  +  +   L P + ++++ P++ F+   +++F           EL  IF 
Sbjct: 75  AGAVTGFLAGFNSVVFWALQPFMTVIRTTPVMSFILLALIWFR---------TELVPIFV 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +  ++ Q + N+ R L E++R FR+  W+  + L +P  +P L      +M 
Sbjct: 126 SFLIAFPIIFDNVVQGIKNVDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  ++A+E++       P  GIG+ +  A    +   IL   + ++ + F+++ +L
Sbjct: 186 LTWKVIIAAEILS-----QPTFGIGTQMQNARIYLETARILSWTVVIVFISFVFESIL 238



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 11/235 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIAS 398
             + L + W  +   +   I   +    +            W     T++R +   +++ 
Sbjct: 14  SIFFLFLVWKILSLVIGAEIILPAPETTMRDLVNAVRSAAFWQSVEATVYRGLAGFLVSC 73

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +     G   GF   +   +QPF  ++   P   F  L +           L    +   
Sbjct: 74  LAGAVTGFLAGFNSVVFWALQPFMTVIRTTPVMSFILLALIWFRT-----ELVPIFVSFL 128

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I  NV+ G         E+A  F +  WR    + +P I P+   G  +A G  W
Sbjct: 129 IAFPIIFDNVVQGIKNVDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMGLTW 188

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              I +E+ S       T G+G  +  +        ++   +++          L
Sbjct: 189 KVIIAAEILS-----QPTFGIGTQMQNARIYLETARILSWTVVIVFISFVFESIL 238


>gi|241765919|ref|ZP_04763849.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
 gi|241364142|gb|EER59352.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax delafieldii 2AN]
          Length = 255

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 94/255 (36%), Gaps = 17/255 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL  ++++  I      + E   P      V +      +  +A RT    ++   
Sbjct: 10  SPWILLVAIVLLWQIVCSAFNVSEFIFPSPWAIGVQLVEFGDVIAGHAWRTFWVTMAGFG 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+++   +   L   SR     + P++    ++P   F+   VV+F              
Sbjct: 70  IAIVVGVLLGFLIGSSRLAYAAVYPLMTAFNALPKAAFVPILVVWFGIGVGP-------- 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ 
Sbjct: 122 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLTKVGLPRSMPYFYGSLK 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +     +
Sbjct: 182 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSSMQMGLAFAGLMVVGAMAMAMYE 235

Query: 258 L---LFRPMIVWSNK 269
           L   + +    W+++
Sbjct: 236 LFSWVEKRTTGWAHR 250



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +    IA ++ + +G  IG      + + P      A P   F P++V       
Sbjct: 60  TFWVTMAGFGIAIVVGVLLGFLIGSSRLAYAAVYPLMTAFNALPKAAFVPILVVWFGIG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           + P +  + L+   + + I+ N+  G +    + ++V        W     + LP   PY
Sbjct: 119 VGPAILTAFLI---SFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLTKVGLPRSMPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+           G+G  +  +           G++++   
Sbjct: 176 FYGSLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSSMQMGLAFAGLMVVGAM 229

Query: 566 VLALNRFL 573
            +A+    
Sbjct: 230 AMAMYELF 237


>gi|148643051|ref|YP_001273564.1| nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding
           component [Methanobrevibacter smithii ATCC 35061]
 gi|148552068|gb|ABQ87196.1| nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding
           component [Methanobrevibacter smithii ATCC 35061]
          Length = 514

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 69/183 (37%), Gaps = 12/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A II + +GI+I   P  +  +     L+   P+   F  ++      + +  +
Sbjct: 28  LISVVFAIIIGLGLGIFISEYPK-NKWVLAIVNLIYTIPSIALFGFLIPVSGVGNTSAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G     +   E A     T  +    I LP   P+ ++  
Sbjct: 87  ALTIYGLL----PMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHIMSAI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N ++++   +     +   GLG  I       + P +V G +++    + ++
Sbjct: 143 R-------NMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLIVAGSVLISVLAICID 195

Query: 571 RFL 573
             L
Sbjct: 196 LIL 198



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 72/187 (38%), Gaps = 16/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++V +++         ++  +    ++ I++++ +IP +         F  L P   +
Sbjct: 28  LISVVFAIIIGLGLGIFISEYPK-NKWVLAIVNLIYTIPSIAL-------FGFLIPVSGV 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   +A+ A+    +  M  + Y  +  I   + E ++    +  Q    + +P ++P +
Sbjct: 80  G-NTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +           V +  +    + I   G+G  I   I   ++  I+   + +  + 
Sbjct: 139 MSAIR-------NMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLIVAGSVLISVLA 191

Query: 253 FLYDQLL 259
              D +L
Sbjct: 192 ICIDLIL 198


>gi|30020367|ref|NP_831998.1| glycine betaine transport system permease protein / glycine
           betaine-binding protein [Bacillus cereus ATCC 14579]
 gi|218232608|ref|YP_002366980.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus B4264]
 gi|228952621|ref|ZP_04114697.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228958548|ref|ZP_04120268.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229044025|ref|ZP_04191714.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH676]
 gi|229079450|ref|ZP_04211990.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock4-2]
 gi|229109720|ref|ZP_04239306.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock1-15]
 gi|229127677|ref|ZP_04256666.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-Cer4]
 gi|229144873|ref|ZP_04273270.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST24]
 gi|229150503|ref|ZP_04278719.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           m1550]
 gi|29895918|gb|AAP09199.1| Glycine betaine transport system permease protein / Glycine
           betaine-binding protein [Bacillus cereus ATCC 14579]
 gi|218160565|gb|ACK60557.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus B4264]
 gi|228632996|gb|EEK89609.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           m1550]
 gi|228638595|gb|EEK95028.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST24]
 gi|228655754|gb|EEL11603.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-Cer4]
 gi|228673761|gb|EEL29019.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock1-15]
 gi|228703820|gb|EEL56266.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock4-2]
 gi|228725306|gb|EEL76574.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH676]
 gi|228801175|gb|EEM48072.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228807087|gb|EEM53630.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 503

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|320007370|gb|ADW02220.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 660

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 79/524 (15%), Positives = 156/524 (29%), Gaps = 43/524 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A+++S++   +       S R   VL P+LD MQ +P   +L   V+ F 
Sbjct: 150 TMQTLALMVVAVLVSVVLGLLLGLAGGLSDRTFRVLRPVLDTMQVLPAFAYLLPVVLVFG 209

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              PG        A+ A        M       L      + E   S   +G Q+     
Sbjct: 210 IGVPG--------AVLATVVYAAPPMARLTALGLRGADPGVMEAVASLGATGRQRLLSAR 261

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 262 LPLARKELLLGLNQTIMMALSMAVIASVIGAG-------GLGDRVYQALSSVDVGAALAA 314

Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
            + ++ +  + D+      R +          R    +   + +                
Sbjct: 315 GIPIVLLAVVLDRTTEAAGRRIGAEPTGPAALRGARGWGLAALIAAAVAVVGRFTGGRIW 374

Query: 302 SWNFFSPLSNNVKKL-----------CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
                 P++  V                 +G            + +  R       +W  
Sbjct: 375 PEGTVVPIAEPVNTAKDWMVDHLYTGVPVIGGTADWAAHFTNWVLNPLRDGLQGLPWWAV 434

Query: 351 VVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           ++   A+      W++    V       VL V  L   T+ +VV  + +  ++   + + 
Sbjct: 435 LLIVAALAWTIGTWRTAATAVLAMAAIGVLGVWDLSMDTLSQVVAAVAVTLVLGFGIAVG 494

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                 +   ++P   +    P  V+   VV+              +  +          
Sbjct: 495 AARSRRLERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAVVRI---- 550

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G         E A S   T  +  R + +P   P  +              I+  + 
Sbjct: 551 TTQGLRGVDPAAMECARSLGATSGQRLRQVQIPLARPALLLAVNQGVVLVLAVVIIGGLV 610

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             G        LG  +     +G     ++    + C  L L+R
Sbjct: 611 GSGA-------LGYEVVFGLAQGDLATGLVAGAAIVCLGLMLDR 647



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 15/228 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I   L     T        +    + V  +   +  T  ++++A+ ++L+  F  A  A
Sbjct: 436 LIVAALAWTIGTWRTAATAVLAMAAIGVLGVWDLSMDTLSQVVAAVAVTLVLGFGIAVGA 495

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+SRRL  +L P+LD+ Q++P   +L   V  F          A + A+ A+        
Sbjct: 496 ARSRRLERLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAAAAAVVYALPAVVRI----- 550

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
                Q L  +     E +RS   +  Q+   + +P + P L+  +   +      V+  
Sbjct: 551 ---TTQGLRGVDPAAMECARSLGATSGQRLRQVQIPLARPALLLAVNQGVVLVLAVVIIG 607

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            ++  G        +G  +   + + DL   L A   ++ +  + D++
Sbjct: 608 GLVGSGA-------LGYEVVFGLAQGDLATGLVAGAAIVCLGLMLDRV 648


>gi|239933968|ref|ZP_04690921.1| putative sulfonate ABC transporter permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291442394|ref|ZP_06581784.1| ABC taurine uptake transporter [Streptomyces ghanaensis ATCC 14672]
 gi|291345289|gb|EFE72245.1| ABC taurine uptake transporter [Streptomyces ghanaensis ATCC 14672]
          Length = 274

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 88/265 (33%), Gaps = 11/265 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           + + ++L      +  H P+             ++  +W     G        S G ++ 
Sbjct: 3   TASPRELVAPRPAVSRHRPKPLSVTLRALGPVLVITGWWIASATGALSPDVLASPGAVLG 62

Query: 370 HFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +      ++ R  + +++     + +G+  GF       +    Q L A 
Sbjct: 63  AVGELWGSDELPDALATSLTRSGIGLLLGLTAGLTLGVITGFSRLGDELLDSSLQALRAV 122

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL++        +      LL+   T + +  +V  G         E   SF +
Sbjct: 123 PFLALVPLLMVWFGINETSK----ILLVAVATTFPMYVSVSGGVRNTDRKLVEAMRSFGM 178

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                 R ++LPG  P  ++G   +   +  A I +E  +       T G+G  +A++  
Sbjct: 179 GRLALVREVVLPGALPSVLSGLRLSMTLSIIALIAAEQIN------ATAGIGYLMAQAQA 232

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                 + L ++I     L  +  +
Sbjct: 233 YARTDVLALCIVIYALLGLTADGIV 257



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 94/269 (34%), Gaps = 23/269 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----- 61
            P     R  P    L A   V+ I    +        P  +     +   V  L     
Sbjct: 13  RPAVSRHRPKPLSVTLRALGPVLVITGWWIASATGALSPDVLASPGAVLGAVGELWGSDE 72

Query: 62  -PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
            P   + +  R    +++ L        +   SR    +L   L  ++++P L  +   +
Sbjct: 73  LPDALATSLTRSGIGLLLGLTAGLTLGVITGFSRLGDELLDSSLQALRAVPFLALVPLLM 132

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F      K++   +A  F         M  S+   + N  R L E  RSF +      
Sbjct: 133 VWFGINETSKILLVAVATTF--------PMYVSVSGGVRNTDRKLVEAMRSFGMGRLALV 184

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +SM+     ++A+E I          GIG  +A A        
Sbjct: 185 REVVLPGALPSVLSGLRLSMTLSIIALIAAEQI------NATAGIGYLMAQAQAYARTDV 238

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +   ++    +    D   +LL R ++ W
Sbjct: 239 LALCIVIYALLGLTADGIVRLLERLLMPW 267


>gi|228908045|ref|ZP_04071893.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis IBL 200]
 gi|228851463|gb|EEM96269.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis IBL 200]
          Length = 503

 Score = 93.8 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|33591062|gb|AAQ23045.1| NrtB [Cyanothece sp. PCC 8801]
          Length = 108

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP+D + V++  RLSG++ FW +  P ++P +   + + +   W  +VA+EM+V G   
Sbjct: 1   QIPKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGGV-- 58

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               GIG +I  +     L  I+ A++ +  V  + D+L+
Sbjct: 59  ----GIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94



 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%)

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P D+K VA    ++G++++  I+ P   PY  TG     G +W A + +E+   G   
Sbjct: 1   QIPKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGG--- 57

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G+G +I +S      PE+++ ++ +    L L+R +
Sbjct: 58  ---VGIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94


>gi|323698304|ref|ZP_08110216.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323458236|gb|EGB14101.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 254

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 82/241 (34%), Gaps = 23/241 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CITMF 388
            + ++     +  + +G+ W+     +      D    +                 ++++
Sbjct: 3   RLFNVALRYGLVVLVMGVLWKLAAVSMGGVILPDPEDALVALVQAMSTQIFWEHFGVSLY 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R V  + +A II  P+G+ +G    +   + PF  L    P  V  P+ +  +     + 
Sbjct: 63  RSVTGMGLAWIIAFPLGLVMGSVKRVDRVLSPFVFLTYPVPKIVLLPIFLLLLGLGDTSK 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              ++L++     + +L     G  +    + +   S         R ++LP   P+  T
Sbjct: 123 IAMIALIL----GYQVLVTTRDGVRSIHPKYFDSVRSLGGGHMDVLREVLLPAALPHGFT 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                 G +       E  +       T GLG  I ++     +  +  G+L M     A
Sbjct: 179 ALRLGTGVSVAVLFFVESFA------TTRGLGYMIMDAWGAMDYLTMFSGILGMSIMGAA 232

Query: 569 L 569
           L
Sbjct: 233 L 233



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 76/235 (32%), Gaps = 17/235 (7%)

Query: 24  AFVLVIGIINILL---HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             VLV+G++  L     G      P D +  +   +      ++   +  R ++ M ++ 
Sbjct: 13  LVVLVMGVLWKLAAVSMGGVILPDPEDALVALVQAMSTQIFWEHFGVSLYRSVTGMGLAW 72

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +  F    +    +R+  VL P + +   +P +          + ++   +   + + I 
Sbjct: 73  IIAFPLGLVMGSVKRVDRVLSPFVFLTYPVPKIV--------LLPIFLLLLGLGDTSKIA 124

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I     + +  +    + +I     +  RS           + +P ++P     + +  
Sbjct: 125 MIALILGYQVLVTTRDGVRSIHPKYFDSVRSLGGGHMDVLREVLLPAALPHGFTALRLGT 184

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 +   E            G+G  I  A    D L +   +L M  +    
Sbjct: 185 GVSVAVLFFVESFA------TTRGLGYMIMDAWGAMDYLTMFSGILGMSIMGAAL 233


>gi|289643652|ref|ZP_06475765.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
 gi|289506543|gb|EFD27529.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
          Length = 306

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 98/243 (40%), Gaps = 12/243 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +P +  ++ F+L+  ++             P + +  +   +        A+RT  R +
Sbjct: 53  TWPKLGAIIIFLLLWQVVVWSGWKPSYVLPGPGEALSDLGRRVTTGDFWSAAARTLQRAV 112

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   +++L   +     A+   L   +   +  +Q++P + +    ++ F          
Sbjct: 113 AGYALAILIGGIVGVAVARFALLRSAVGSFITALQTMPSIVWFPLAILLFKL-------- 164

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +      ++   +   +  +P  L  + R+    G Q +  +  P ++P +V
Sbjct: 165 TESAILFVVVLGAAPSIANGVISGIDYVPPLLTRLGRTMGARGLQLYRLVVAPAALPSVV 224

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +    +  W  ++A E++VV   V   P IGS +  + +  D + +L  M+T+  +  
Sbjct: 225 AGLKQGWAFAWRSLMAGELLVV---VPGHPSIGSDLEDSRQLLDTVGVLAMMMTIFVIGV 281

Query: 254 LYD 256
           L D
Sbjct: 282 LVD 284



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 84/237 (35%), Gaps = 14/237 (5%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYI------VNHFTYQDVLYVIWLGCI-TMFRVVVL 393
             +  I  F ++  V +   W+    +      ++    +      W     T+ R V  
Sbjct: 55  PKLGAIIIFLLLWQVVVWSGWKPSYVLPGPGEALSDLGRRVTTGDFWSAAARTLQRAVAG 114

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             +A +I   VG+ +     + S +  F   L   P+ V+FPL +             + 
Sbjct: 115 YALAILIGGIVGVAVARFALLRSAVGSFITALQTMPSIVWFPLAILLFKLT----ESAIL 170

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            +++ G    I   VI+G    P     +  +    G + +R ++ P   P  V G    
Sbjct: 171 FVVVLGAAPSIANGVISGIDYVPPLLTRLGRTMGARGLQLYRLVVAPAALPSVVAGLKQG 230

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              AW + +  E+     +      +G+ + +S +      V+  ++ +    + ++
Sbjct: 231 WAFAWRSLMAGELLV---VVPGHPSIGSDLEDSRQLLDTVGVLAMMMTIFVIGVLVD 284


>gi|228920992|ref|ZP_04084329.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228838686|gb|EEM83990.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 503

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|84494364|ref|ZP_00993483.1| putative transporter [Janibacter sp. HTCC2649]
 gi|84383857|gb|EAP99737.1| putative transporter [Janibacter sp. HTCC2649]
          Length = 283

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 86/257 (33%), Gaps = 14/257 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R         + +  R +  +           ++  +  +        T+       
Sbjct: 13  STPRKSPSPGESLVGAYGRPAAFVAAILVLWWLLTSVTSSLPTYLVPSPGDTWSAFADNA 72

Query: 381 WLGC----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                   +T+   V+  ++A I+ + V I + +       + P        P     PL
Sbjct: 73  GYFATHTWVTLVETVIGFVVAVIVGLLVAIAMIYSTSFERTLYPLVLFAQVVPKIAIAPL 132

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V  +  + + P + +++LM     + I+ + +AG  +   +  E+ S+      + +  
Sbjct: 133 FVVWLG-FGMTPKIVVAVLM---AFFPIVISGLAGLKSVDPEILELTSTMGANPLKVFAK 188

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I  P   P   +G   A   A   ++V E           +GLG  I ++        + 
Sbjct: 189 IRFPASLPQLFSGLKVAATLAVTGAVVGEFVG------SNSGLGYVILQANGNVDTASLF 242

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++IM    +AL   L
Sbjct: 243 VALIIMSLLGVALFGLL 259



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A +++  ++  +   +    VP           +      +   T +  +   V++++
Sbjct: 36  VAAILVLWWLLTSVTSSLPTYLVPSPGDTWSAFADNAGYFATHTWVTLVETVIGFVVAVI 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A     S      L P++   Q +P +      VV+       K++ A L A F 
Sbjct: 96  VGLLVAIAMIYSTSFERTLYPLVLFAQVVPKIAIAPLFVVWLGFGMTPKIVVAVLMAFF- 154

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S    L ++  ++ E++ +   +  + F  +  P S+P L   + ++  
Sbjct: 155 -------PIVISGLAGLKSVDPEILELTSTMGANPLKVFAKIRFPASLPQLFSGLKVA-- 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +A    VVG+ V    G+G  I  A    D  ++  A++ M  +      LL
Sbjct: 206 ----ATLAVTGAVVGEFVGSNSGLGYVILQANGNVDTASLFVALIIMSLLGVALFGLL 259


>gi|228900870|ref|ZP_04065085.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis IBL 4222]
 gi|228858796|gb|EEN03241.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis IBL 4222]
          Length = 503

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRMLERP 204



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|226309436|ref|YP_002769396.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188553|dbj|BAH36657.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 281

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++   V   IA +I +P G+ +G    + +      +L+   P     PL+V       
Sbjct: 86  TLWAAFVGYAIALVIAVPAGLLLGLSNRLYALTSTIVELIRPLPPIGLVPLLVLVAGQG- 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  + ++  G  + +L N I G  +     +  A SF  +       ++ P   P 
Sbjct: 145 ---LEMKATVVALGCVFPLLVNTIHGVHSTNGVARATARSFGWSPVVVAWRVVWPSAIPS 201

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCC 564
            +TG       A    I +E          T GLG+++ + +        V  GV++   
Sbjct: 202 VLTGVRVTVSIALILCIGAEFIGG-----STKGLGSWLLQQSMLPQGIESVCAGVIVAGL 256

Query: 565 FVLALNRFL 573
             L +N  +
Sbjct: 257 LGLLVNAVV 265



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 89/255 (34%), Gaps = 18/255 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVI 78
           F ++ F+    II+      ++   P     I    L    +       T         I
Sbjct: 37  FGVIGFLATWEIISRFHLLPRDALPPASTTLIRATRLLTDQTFLAQIGNTLWAAFVGYAI 96

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+       L   S RL  +   I+++++ +P +G +   V+        K     L  
Sbjct: 97  ALVIAVPAGLLLGLSNRLYALTSTIVELIRPLPPIGLVPLLVLVAGQGLEMKATVVALGC 156

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F         +  +    + +        +RSF  S     W +  P ++P ++  + +
Sbjct: 157 VF--------PLLVNTIHGVHSTNGVARATARSFGWSPVVVAWRVVWPSAIPSVLTGVRV 208

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSY-IALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           ++S      + +E I          G+GS+ +  ++  Q + ++   ++    +  L + 
Sbjct: 209 TVSIALILCIGAEFIGGSTK-----GLGSWLLQQSMLPQGIESVCAGVIVAGLLGLLVNA 263

Query: 257 --QLLFRPMIVWSNK 269
              +L      W+ +
Sbjct: 264 VVSVLETNFASWARR 278


>gi|186475722|ref|YP_001857192.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184192181|gb|ACC70146.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 274

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 10/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V  + +     +     IT+   V+   + +++ + VG+W+   P  S+   P+ +  
Sbjct: 57  VLVRIWEWFASGEIYLHLWITLIETVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAA 116

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            + P  +  P+          +       L+ F     + FNV  G           A  
Sbjct: 117 NSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARM 172

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                 +  R + LP    +  +   T+ G A+  S+V E            G+G  I +
Sbjct: 173 LGANRKQLLRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQ 226

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +        V  G+L++  F L L+  +
Sbjct: 227 AEGTFDINTVFAGILVLTAFALILDAIV 254



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  + A  +  +         A S     +  P +    S+P +       V+F
Sbjct: 73  HLWITLIETVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWF 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV        F +F        F++YQ +  +   +   +R    +  Q    +
Sbjct: 133 GLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANRKQLLRAV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 185 YLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDINTVFA 238

Query: 244 AMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            +L +     + D +   L + ++ W  K
Sbjct: 239 GILVLTAFALILDAIVGVLEKRLMKWQPK 267


>gi|313889344|ref|ZP_07822992.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122176|gb|EFR45267.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 508

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 15/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A+L +KS+R   +++ I  I Q+IP L  L   +        G V       I+AIF   
Sbjct: 41  ASLLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMG---IGTVPAVSALVIYAIF--- 94

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +  +    L  I   L E   +F ++ W++     +P +MP ++  +  S       
Sbjct: 95  --PIIQNTITGLNGIEPSLVEAGIAFGMTKWERLKKFEIPIAMPVIMSGVRTSA----VM 148

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ +  +    ++I   G+GS+I L I   +   IL   ++   +  L++ +L
Sbjct: 149 IIGTATLA---SLIGAGGLGSFILLGIDRNNTDLILIGAVSSALLAILFNSIL 198



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +      S  +     +    P+     L +  +    +     +S L+I+   + I+ 
Sbjct: 43  LLSKSKRWSDIVLQITGIFQTIPSLALLGLFIPLMGIGTVP---AVSALVIY-AIFPIIQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G +       E   +F +T W   +   +P   P  ++G  T+       + ++ +
Sbjct: 99  NTITGLNGIEPSLVEAGIAFGMTKWERLKKFEIPIAMPVIMSGVRTSAVMIIGTATLASL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 159 IGAG-------GLGSFILLGIDRNNTDLILIGAVSSALLAILFNSIL 198


>gi|227431539|ref|ZP_03913580.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|296110190|ref|YP_003620571.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc kimchii IMSNU 11154]
 gi|227352708|gb|EEJ42893.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|295831721|gb|ADG39602.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc kimchii IMSNU 11154]
          Length = 508

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEETADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  ++G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIISGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEETADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIISGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|115373306|ref|ZP_01460606.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369752|gb|EAU68687.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Stigmatella aurantiaca
           DW4/3-1]
          Length = 482

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V  + +        +  ++V S+L       LAA+  RLG +++ +  I+Q++P L  L 
Sbjct: 270 VSRIGRRTREHLFLVTVSLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLV 329

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +                 AI A+F   +  +  +    L  I  DL E + +  L   
Sbjct: 330 FMIPLLGIGTRP--------AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPR 381

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + W + +P + P L+  +  +       V+      +G  +I   G G  I   I+  D
Sbjct: 382 ARLWRIELPLAAPSLLAGIQTA------AVINVGTATLG-ALIGAGGYGQPILTGIRLDD 434

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              IL   +    +      L 
Sbjct: 435 TGLILEGAVPAALMALAVSALF 456



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F V V ++ + ++ +P+G+    R  +   +   A ++   P+      ++  +     
Sbjct: 281 LFLVTVSLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTR 340

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      I+ N  AG S    D +E A +  +        I LP   P  
Sbjct: 341 PAIMALFLYGLL----PIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSL 396

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + +  +   G       G G  I           ++ G +      
Sbjct: 397 LAGIQTAAVINVGTATLGALIGAG-------GYGQPILTGIRLDDTGLILEGAVPAALMA 449

Query: 567 LALNRFL 573
           LA++   
Sbjct: 450 LAVSALF 456


>gi|206971626|ref|ZP_03232576.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH1134]
 gi|206733611|gb|EDZ50783.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH1134]
          Length = 503

 Score = 93.8 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|262198375|ref|YP_003269584.1| substrate-binding region of ABC-type glycine betaine transporter
           [Haliangium ochraceum DSM 14365]
 gi|262081722|gb|ACY17691.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Haliangium ochraceum DSM 14365]
          Length = 537

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP       +  + A+ + L  +   A L  + R L   L+ +  I+Q+IP L  L   V
Sbjct: 12  LPALLGAHIVLTVIALALGLAISLPAAFLGLRQRALQGPLLAVASIIQTIPSLAILALMV 71

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F        +  + AA+ A+    V  +  +    +  +     E +R   ++  Q  
Sbjct: 72  AAFG-------LFGQPAALIALTAYSVLPILRNTITGIEGVDPAAVEAARGIGMTRNQIL 124

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P + P ++  +  +    W   +A+    VG        +GSYI   ++ ++  A
Sbjct: 125 WRVQLPLAAPIILAGIRTA--TVWVVGIATLATPVGADS-----LGSYIFGGLQTRNTTA 177

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L+ +++   +    D L+
Sbjct: 178 VLFGVVSAAALAIALDSLI 196



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++      +  +  L    +   V+ + +   I +P       +  +   +   A ++  
Sbjct: 1   MSPIFATQLERLPALLGAHIVLTVIALALGLAISLPAAFLGLRQRALQGPLLAVASIIQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L+V+    +   P   ++L     +   IL N I G         E A    
Sbjct: 61  IPSLAILALMVAAFGLFG-QPAALIALTAY--SVLPILRNTITGIEGVDPAAVEAARGIG 117

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T  +    + LP   P  + G  TA    W   I +     G        LG+YI    
Sbjct: 118 MTRNQILWRVQLPLAAPIILAGIRTA--TVWVVGIATLATPVG-----ADSLGSYIFGGL 170

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  +   V+ GV+      +AL+  +
Sbjct: 171 QTRNTTAVLFGVVSAAALAIALDSLI 196


>gi|156934057|ref|YP_001437973.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532311|gb|ABU77137.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894]
          Length = 288

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 102/258 (39%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIFD-----LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           P  ++ R++   +      ++A + V   +  + +           +      +    LP
Sbjct: 26  PLPLTTRLWNQAWVRKTLLVIALLAVWESVARIQNNDLMLPGFWQTLRAFSEDMHSGELP 85

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +   +L    I  +   V++ LA  +R    +L  +  ++  +P +  L   +++
Sbjct: 86  AKILNSLGTLLKGYAIGSVLALVFSALAISTRLGRDLLSTLTAMLNPLPAIALLPLALLW 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + IF +  S +W +  + +    ++P  L    R++ LSG +    
Sbjct: 146 FGLGQG--------SLIFVLVHSVMWPIALNTWSGFQSVPETLRMAGRNYGLSGPRLVLN 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     + 
Sbjct: 198 ILIPAALPSIISGLKIGWAFAWRTLIAAELVFGASS--GDGGLGWYIFQNRNELFTDRVF 255

Query: 243 YAMLTMLGVIFLYDQLLF 260
             + T++ +  L + L+F
Sbjct: 256 AGLATVIIIGLLVEGLVF 273



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 9/224 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ++          ++   I     T+ +   +  + ++++  + I           +  
Sbjct: 69  WQTLRAFSEDMHSGELPAKILNSLGTLLKGYAIGSVLALVFSALAI---STRLGRDLLST 125

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +L   PA    PL +        +    L  +++    W I  N  +G  + P   +
Sbjct: 126 LTAMLNPLPAIALLPLALLWFGLGQGS----LIFVLVHSVMWPIALNTWSGFQSVPETLR 181

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
               ++ ++G R    I++P   P  ++G       AW   I +E+           GLG
Sbjct: 182 MAGRNYGLSGPRLVLNILIPAALPSIISGLKIGWAFAWRTLIAAELVFGASS--GDGGLG 239

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 240 WYIFQNRNELFTDRVFAGLATVIIIGLLVEGLVFATLEKATVRR 283


>gi|315925503|ref|ZP_07921713.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315621044|gb|EFV01015.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 446

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                 +L+A+ +S+L        A    +   +++ ++DI+Q+IP L  L   ++    
Sbjct: 7   MEHMFLVLAAITMSILIGIPLGVCAYMMPKSRGLILKVVDILQTIPALALLGLIMIL--- 63

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PGK     L  +  I    +  +  +    L  I   +EE ++   ++  ++   +  
Sbjct: 64  AGPGK-----LTVVIGITLYSLLPIVQNTCLGLSGIDPGVEEAAKGVGMTSMERLTQVEF 118

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + +++       V +  +  G            +  AI+ QD+  IL A 
Sbjct: 119 PIAFPTVFTGIRIALVNAIGIAVFAAFVGGGGIGGV-------MNKAIRIQDMKMILTAT 171

Query: 246 LTMLGVIFLYDQLL 259
             ++ +  + D L+
Sbjct: 172 GALMLIAVVLDLLM 185



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           MF V+  I ++ +I IP+G+     P     I     +L   PA     L++       L
Sbjct: 10  MFLVLAAITMSILIGIPLGVCAYMMPKSRGLILKVVDILQTIPALALLGLIMILAGPGKL 69

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + ++L  +      I+ N   G S      +E A    +T       +  P  FP  
Sbjct: 70  TVVIGITLYSLL----PIVQNTCLGLSGIDPGVEEAAKGVGMTSMERLTQVEFPIAFPTV 125

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A   A   ++ +     G I          + ++        ++     +    
Sbjct: 126 FTGIRIALVNAIGIAVFAAFVGGGGIGGV-------MNKAIRIQDMKMILTATGALMLIA 178

Query: 567 LALNRFL 573
           + L+  +
Sbjct: 179 VVLDLLM 185


>gi|310824496|ref|YP_003956854.1| glycine betaine/l-proline ABC transporter permease and
           substrate-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397568|gb|ADO75027.1| Glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 510

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V  + +        +  ++V S+L       LAA+  RLG +++ +  I+Q++P L  L 
Sbjct: 298 VSRIGRRTREHLFLVTVSLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLV 357

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +                 AI A+F   +  +  +    L  I  DL E + +  L   
Sbjct: 358 FMIPLLGIGTRP--------AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPR 409

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + W + +P + P L+  +  +       V+      +G  +I   G G  I   I+  D
Sbjct: 410 ARLWRIELPLAAPSLLAGIQTA------AVINVGTATLG-ALIGAGGYGQPILTGIRLDD 462

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              IL   +    +      L 
Sbjct: 463 TGLILEGAVPAALMALAVSALF 484



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F V V ++ + ++ +P+G+    R  +   +   A ++   P+      ++  +     
Sbjct: 309 LFLVTVSLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTR 368

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      I+ N  AG S    D +E A +  +        I LP   P  
Sbjct: 369 PAIMALFLYGLL----PIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSL 424

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + +  +   G       G G  I           ++ G +      
Sbjct: 425 LAGIQTAAVINVGTATLGALIGAG-------GYGQPILTGIRLDDTGLILEGAVPAALMA 477

Query: 567 LALNRFL 573
           LA++   
Sbjct: 478 LAVSALF 484


>gi|187779975|ref|ZP_02996448.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC
           15579]
 gi|187773600|gb|EDU37402.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC
           15579]
          Length = 253

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +       +     W+   
Sbjct: 7   KENKTISRLVRKTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILEAKKYFWISVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+  I+I+  + I +GI  G    +   ++P    + A P      + +      
Sbjct: 67  KSILRVITGILISIALGISLGIIAGINVFMEELLEPLIVTIKATPVMSIIIIALVWF--K 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 125 SSSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLLEMANLYKVKNKYILTNIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SE+ S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEILSTPKYSIGLNLLNAKAILATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 105/249 (42%), Gaps = 9/249 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M +  I       R+      ++ +V +  + ++ ++       P+ + + + I      
Sbjct: 1   MKISTIKENKTISRLVRKTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILEAKKY 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                 ++ LR+++ ++IS+        +A  +  +  +L P++  +++ P++  +   +
Sbjct: 61  FWISVFKSILRVITGILISIALGISLGIIAGINVFMEELLEPLIVTIKATPVMSIIIIAL 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F          +   AIF         +  ++   + ++ + L E++  +++      
Sbjct: 121 VWF---------KSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLLEMANLYKVKNKYIL 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  ++M +  GW   VASE++      I L  + +   LA +E     
Sbjct: 172 TNIYLPSTKPYIISGILMCLGIGWKVSVASEILSTPKYSIGLNLLNAKAILATEELFAWT 231

Query: 241 ILYAMLTML 249
           I+  +L+++
Sbjct: 232 IVVVLLSLI 240


>gi|261350153|ref|ZP_05975570.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Methanobrevibacter
           smithii DSM 2374]
 gi|288860939|gb|EFC93237.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Methanobrevibacter
           smithii DSM 2374]
          Length = 514

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 70/183 (38%), Gaps = 12/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+A I+ + +GI+I   P  +  I     L+   P+   F  ++      + +  +
Sbjct: 28  LISVILAIILGLGLGIFISEYPK-NKWILAIVNLIYTIPSIALFGFLIPVSGVGNTSAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G     +   E A     T  +    I LP   P+ ++  
Sbjct: 87  ALTIYGLL----PMVRNTYTGIRTIDSKIIEAAKGMGSTDLQILLKIKLPLALPHIMSAI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N S+++   +     +   GLG  I       + P +V G +++    + ++
Sbjct: 143 R-------NMSVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLIVAGSVLISVLAIGID 195

Query: 571 RFL 573
             L
Sbjct: 196 LIL 198



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 75/188 (39%), Gaps = 18/188 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++++++         ++  +    ++ I++++ +IP +         F  L P   +
Sbjct: 28  LISVILAIILGLGLGIFISEYPK-NKWILAIVNLIYTIPSIAL-------FGFLIPVSGV 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   +A+ A+    +  M  + Y  +  I   + E ++    +  Q    + +P ++P +
Sbjct: 80  G-NTSAVIALTIYGLLPMVRNTYTGIRTIDSKIIEAAKGMGSTDLQILLKIKLPLALPHI 138

Query: 193 VWNMM-MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +  +  MS+       +AS         I   G+G  I   I   ++  I+   + +  +
Sbjct: 139 MSAIRNMSVMTIALAGIAS--------FIGAGGLGVAIYRGITTNNMPLIVAGSVLISVL 190

Query: 252 IFLYDQLL 259
               D +L
Sbjct: 191 AIGIDLIL 198


>gi|306830018|ref|ZP_07463205.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus mitis ATCC 6249]
 gi|304428029|gb|EFM31122.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus mitis ATCC 6249]
          Length = 506

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     +L N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PVLQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNTSLILIGALSSAVLAIAFNFLL 198



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPVLQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNTSLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|296437343|gb|ADH19513.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis G/11222]
          Length = 589

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLAPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 ENSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERRTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSTQGLLHPLCVLVQCLPMFTLAPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIENSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERRTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|150015507|ref|YP_001307761.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149901972|gb|ABR32805.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 257

 Score = 93.5 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 79/196 (40%), Gaps = 11/196 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++   ++ +R  +  +++ II +P+GI I      + S ++      +     + + L+
Sbjct: 54  LLYHIELSFYRSFLGFLLSIIIAVPLGIAISILVKQMQSSVELVLDACSQINPFIVYHLI 113

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            +++ +   W ILF+ I G     + + +   SF +  W +   I
Sbjct: 114 IIILGVGEFTQ----IVVITWTCIWPILFSTITGILNVDDSYIKHGKSFALNKWDFISKI 169

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  + G   +   +    I +E+         ++GLG  I           V+ 
Sbjct: 170 LLPGALPQIMHGVKLSLNYSLFMLIAAEMMGG------SSGLGFLIKSCQNMYRVDWVIG 223

Query: 558 GVLIMCCFVLALNRFL 573
            V+++    L ++  +
Sbjct: 224 IVIVIAMIGLLMDSIV 239



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILGFLT 117
             L  +   +  R     ++S++         +   +++   +  +LD    I       
Sbjct: 52  QKLLYHIELSFYRSFLGFLLSIIIAVPLGIAISILVKQMQSSVELVLDACSQINPFIVYH 111

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++             E   I  I  + +W + FS    + N+     +  +SF L+ W
Sbjct: 112 LIIIILGVG--------EFTQIVVITWTCIWPILFSTITGILNVDDSYIKHGKSFALNKW 163

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P ++P ++  + +S++   F ++A+EM+          G+G  I        
Sbjct: 164 DFISKILLPGALPQIMHGVKLSLNYSLFMLIAAEMMGGSS------GLGFLIKSCQNMYR 217

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  ++  ++ +  +  L D ++
Sbjct: 218 VDWVIGIVIVIAMIGLLMDSIV 239


>gi|222081718|ref|YP_002541083.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726397|gb|ACM29486.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 282

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      T   +++A  ++LL       +A     L  +L P+LD++Q++P   +L   
Sbjct: 86  GLWPETMSTLALVITATFLALLVAIPAGVIAGFVPALDRILEPVLDLIQTMPPYIYLLPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +                 A+ A     +          +   P +  E+ ++  ++G Q 
Sbjct: 146 IALLGYG--------PATALVATVIVAMPPAFRLTSLGIRMTPLEFVELGQASGMTGLQT 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ + +PF+MP ++  +  S+   +  VV + ++  G       G+G  I  AI+  D+ 
Sbjct: 198 FFKIRLPFAMPSIMAGINQSLMMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIA 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
             + A + ++ +  + D+L
Sbjct: 251 KSINAAIAIVVLTMVLDRL 269



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 87/235 (37%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
            L    F VV  V   ++W+ +      F    +++   +G       T+  V+    +A
Sbjct: 46  ALQFAPFYVVAIVIAALSWRLVNVWFGIFAAVALVFCAAIGLWPETMSTLALVITATFLA 105

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ IP G+  GF P +   ++P   L+   P  ++    ++ + Y      +   ++ +
Sbjct: 106 LLVAIPAGVIAGFVPALDRILEPVLDLIQTMPPYIYLLPAIALLGYGPATALVATVIVAM 165

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                        G    P +F E+  +  +TG + +  I LP   P  + G   +   A
Sbjct: 166 PPAFRL----TSLGIRMTPLEFVELGQASGMTGLQTFFKIRLPFAMPSIMAGINQSLMMA 221

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +   +++ +   G       GLG  I  +       + +   + +    + L+R 
Sbjct: 222 FGMVVIAGIVGSG-------GLGETIYGAIRTLDIAKSINAAIAIVVLTMVLDRL 269


>gi|84516982|ref|ZP_01004339.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
 gi|84509100|gb|EAQ05560.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
          Length = 283

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y++    IT   V+    +A  I   +GI +G        I P+   L   P   F PL 
Sbjct: 81  YMLSALWITTKEVIYGFALAMAIGFSLGILVGETAFGERAIMPYLVALDTMPKVAFAPLF 140

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ + +   +       L  F   + I+    AG  A   + + +  +   +  +    +
Sbjct: 141 IAWLGFGIESK----VALAAFIATFPIVVGTAAGLHATDENSRMLFKTMGASRLQTLFKM 196

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P   TG      G    +I +E    G       G G  I  +  + + P V  
Sbjct: 197 KLPMGLPQIFTGLKIGAVGVMAGAITAEFLGGGK------GFGELIRVAASQLNTPRVFS 250

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            +L +    L L     + L  +  R +
Sbjct: 251 LILYLSILGLGL-----YALVTFAQRRI 273



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 17/203 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT  ++    +++   F    L  ++      ++P L  + ++P + F    + +     
Sbjct: 89  TTKEVIYGFALAMAIGFSLGILVGETAFGERAIMPYLVALDTMPKVAFAPLFIAWLGFGI 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A   A F         +       L     +   + ++   S  Q  + + +P 
Sbjct: 149 ESKVALAAFIATF--------PIVVGTAAGLHATDENSRMLFKTMGASRLQTLFKMKLPM 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +   + +   G     + +E +  G       G G  I +A  + +   +   +L 
Sbjct: 201 GLPQIFTGLKIGAVGVMAGAITAEFLGGGK------GFGELIRVAASQLNTPRVFSLILY 254

Query: 248 MLGVIFLYDQLLF---RPMIVWS 267
           +  +      L+    R ++ W 
Sbjct: 255 LSILGLGLYALVTFAQRRIVFWH 277


>gi|296536170|ref|ZP_06898296.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
 gi|296263500|gb|EFH09999.1| sulfonate ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
          Length = 296

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 77/224 (34%), Gaps = 10/224 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W   V  + +          +     Q    ++     T+   +    +A +  + +G
Sbjct: 54  LLWEVAVVALKVDPFILPAPSAIAASMVQWWHPLLDNAWQTLMTTLAGFALAIVFGLALG 113

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG    +   + P      + P     P++V           +   +     + + I+
Sbjct: 114 VLIGSSALLYHGLYPLLIGFNSVPKVAVVPVLVIWFGIG----TVPAIITAFLISFFPIV 169

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            NV  G +    + ++V  +         R + LP   PY+      A   A+  SI++E
Sbjct: 170 VNVATGIATVEPELRDVLRALGARQTDIIRKVGLPRAMPYFFASLKIAITVAFVGSILAE 229

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +         G+G  +  ++ +   P V  G+++     +A+
Sbjct: 230 TVA------ANKGIGQLMMLASSRFDVPLVFAGLMVTAIMGVAM 267



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 87/237 (36%), Gaps = 14/237 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + ++    ++  + ++   +    +P        +    H L   A +T +  L+   +
Sbjct: 45  PWLVILAAFLLWEVAVVALKVDPFILPAPSAIAASMVQWWHPLLDNAWQTLMTTLAGFAL 104

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++F      L   S  L   L P+L    S+P +  +   V++F            + A
Sbjct: 105 AIVFGLALGVLIGSSALLYHGLYPLLIGFNSVPKVAVVPVLVIWFGIG--------TVPA 156

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F    + +  ++   +  +  +L +V R+           +G+P +MP    ++ +
Sbjct: 157 IITAFLISFFPIVVNVATGIATVEPELRDVLRALGARQTDIIRKVGLPRAMPYFFASLKI 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +++  +   + +E +          GIG  + LA    D+  +   ++    +    
Sbjct: 217 AITVAFVGSILAETVAANK------GIGQLMMLASSRFDVPLVFAGLMVTAIMGVAM 267


>gi|91783652|ref|YP_558858.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91687606|gb|ABE30806.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 353

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 87/288 (30%), Gaps = 22/288 (7%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           +     F  L   +        V     P N   + + +  +++  + W   +       
Sbjct: 61  WPYTKTFIALKLVLAAFAIATAVAGRRGPSNRKAVTATRIGAWLAAMPWLLALALGVSVW 120

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVVLIIIASIIWIPVGIW 407
              +         +      +                 +   +    ++ ++    +G+ 
Sbjct: 121 EAVTAQLEWLPRPFFAPPQALIGVYAEDYPRLGTSVVHSFGLLAYGYLLGAVAGFAIGVS 180

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG+   +S  + P  +L+   PA  + PL                  L+   T + +   
Sbjct: 181 IGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFFFPSSFS----ASVFLIALATAFPVAVL 236

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             +G +   + + ++A +           + +P   P    G     G +++  IV+E+ 
Sbjct: 237 TWSGVAGVNSAYYDIARTLGARPSFLILRVAIPAALPSVFVGLFMGLGASFSVLIVAEMM 296

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                     GLG Y+  +    ++  +   +L+M      L   L+ 
Sbjct: 297 G------VKAGLGWYLQWAQGWAAYSNMYAALLVMALMCSGLITLLFR 338



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 88/252 (34%), Gaps = 20/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           LLA  L + +   +   ++    P        I +   D   L      +   +    ++
Sbjct: 110 LLALALGVSVWEAVTAQLEWLPRPFFAPPQALIGVYAEDYPRLGTSVVHSFGLLAYGYLL 169

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +  F        S+ +   + P+L ++  +P   +L     +           +  A+
Sbjct: 170 GAVAGFAIGVSIGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFF--------FPSSFSAS 221

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  +  +     +++R+           + +P ++P +   + M
Sbjct: 222 VFLIALATAFPVAVLTWSGVAGVNSAYYDIARTLGARPSFLILRVAIPAALPSVFVGLFM 281

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  ++ +EM+ V        G+G Y+  A        +  A+L M  +      L
Sbjct: 282 GLGASFSVLIVAEMMGVKA------GLGWYLQWAQGWAAYSNMYAALLVMALMCSGLITL 335

Query: 259 LFR---PMIVWS 267
           LFR    ++ W 
Sbjct: 336 LFRVRDRLLAWQ 347


>gi|310657387|ref|YP_003935108.1| ssuc [Clostridium sticklandii DSM 519]
 gi|308824165|emb|CBH20203.1| SsuC [Clostridium sticklandii]
          Length = 289

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT+  V   +   S I I + I  G+   I   I P    ++  P     P+
Sbjct: 78  GELYKHASITLTEVFWGLFFGSAIGILLAIVFGYFSFIGEIITPIISAISCIPQLALAPV 137

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V        +      L++ F     +         +      E A+    + ++  R 
Sbjct: 138 YVLWFGLGLTSKIFLAGLMVFF----NVFSATYGAIKSMDKGILESANLLGASHFQTLRT 193

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P+ ++G       A   +I+ E            G G  I  ST   +   V+
Sbjct: 194 VVIPSCMPWILSGLRGGVSAALVGAIIGEYIG------SKGGFGWMITYSTSYFNISRVM 247

Query: 557 LGVLIMCCFVLALNRFL 573
             ++I+    L LN+ L
Sbjct: 248 SCIVILLFVGLGLNKIL 264



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 84/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  I+  + +      L ++AS T   +   +        + A +      +G ++ 
Sbjct: 61  TSYPSQILKDLMVFFTSGELYKHASITLTEVFWGLFFGSAIGILLAIVFGYFSFIGEIIT 120

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+  +  IP L      V++F      K+  A L   F +F++         Y ++ ++
Sbjct: 121 PIISAISCIPQLALAPVYVLWFGLGLTSKIFLAGLMVFFNVFSA--------TYGAIKSM 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + + E +     S +Q    + +P  MP ++  +   +S      +  E I        
Sbjct: 173 DKGILESANLLGASHFQTLRTVVIPSCMPWILSGLRGGVSAALVGAIIGEYIGSKG---- 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G G  I  +    ++  ++  ++ +L V    +++L
Sbjct: 229 --GFGWMITYSTSYFNISRVMSCIVILLFVGLGLNKIL 264


>gi|330964542|gb|EGH64802.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 418

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT---- 55
           M L N  P    R I     F LL F   +G    L     +  +P  +     +     
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAVQMADAVNRMAF 60

Query: 56  -----LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
                   + L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  TADTRTGDYLLWQDSASSLKRLAIGLGISALLGLCLGIAAGIVPLFGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 19/218 (8%)

Query: 378 YVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++W     ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLLWQDSASSLKRLAIGLGISALLGLCLGIAAGIVPLFGAPLSPLLTVLSMVPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +   + W     
Sbjct: 129 LFIVFGLGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P  +       G AW   I +E  +       T GLG  I       +   ++
Sbjct: 185 VVLPQLLPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVIL 238

Query: 557 LGVLIMCCFVLALN-------RFLWH-PLYLYGTRCLR 586
             V+ +      ++       R  W   L+    R  R
Sbjct: 239 PYVVWITLLAWLMDWGLKALTRASWSGRLFGRAKREAR 276


>gi|319757373|gb|ADV69315.1| putative ABC-transport protein, membrane component [Streptococcus
           suis JS14]
          Length = 252

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 80/241 (33%), Gaps = 23/241 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------------DVLYVIWLGCITMFRVVV 392
            FW      VA+ I W    Y     ++              D  ++      ++  V  
Sbjct: 9   YFWLTFSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFF 68

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
                 ++  P  + + +     + ++P+ Q +   P   + PLVV       L      
Sbjct: 69  GFTSGFLLSAPNALLMAWYSPYRNIVKPWIQFIRNIPPLAYVPLVVISAGVGLLPQ---- 124

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++   T   +   +  G      +  + A     + +  ++ I++P   P+ +T    
Sbjct: 125 VIVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPSSIPFIMTAVRL 184

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               +    I +E          T+G+G  I           ++L ++++    L LN+ 
Sbjct: 185 GTSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKL 238

Query: 573 L 573
           +
Sbjct: 239 V 239



 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 17/253 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F L+  +++   ++      +       + + + I +D   + +    +   +       
Sbjct: 14  FSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFFGFTSG 73

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L +   A L A       ++ P +  +++IP L ++   V+              L  +
Sbjct: 74  FLLSAPNALLMAWYSPYRNIVKPWIQFIRNIPPLAYVPLVVISAGVGL--------LPQV 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I  +    MT ++YQ + NI  +L + +R    S ++ F  + VP S+P ++  + + 
Sbjct: 126 IVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPSSIPFIMTAVRLG 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
            S     ++A+E      +     G+G  I       D   +L  ++ +  +  L +   
Sbjct: 186 TSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKLV 239

Query: 257 QLLFRPMIVWSNK 269
            L+ R +  W  K
Sbjct: 240 DLIERKLTGWQQK 252


>gi|229167113|ref|ZP_04294856.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH621]
 gi|228616347|gb|EEK73429.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH621]
          Length = 503

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|312862789|ref|ZP_07723029.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus vestibularis F0396]
 gi|311101649|gb|EFQ59852.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus vestibularis F0396]
          Length = 506

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 26/197 (13%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A   +  +R+   ++ +  + Q+IP +  L         L+   +    L A
Sbjct: 33  AIFLAVPLAIYLSTRKRVSNWVLQLAGVFQTIPSMALL--------GLFIPIMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   LEE   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLRGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ MI+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVMIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAFLAIAF 194

Query: 256 DQLLFRPMIVWSNKFRL 272
           + LL      W  K +L
Sbjct: 195 NLLL-----KWMEKAKL 206



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  + +P+ I++  R  +S+ +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFLAVPLAIYLSTRKRVSNWVLQLAGVFQTIPSMALLGLFIPIMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLRGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIMSGIRTAAVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAFLAIAFNLLL 198


>gi|229059945|ref|ZP_04197319.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH603]
 gi|228719358|gb|EEL70962.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH603]
          Length = 503

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|229161250|ref|ZP_04289237.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           R309803]
 gi|228622346|gb|EEK79185.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           R309803]
          Length = 503

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 77/201 (38%), Gaps = 20/201 (9%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  +M           +++VG   +    IG+     +    + 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
              +A++ +  V      L F
Sbjct: 174 RNDHALIVLGAVPAALLALFF 194



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +VLG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIVLGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|171057780|ref|YP_001790129.1| binding-protein-dependent transport systems inner membrane
           component [Leptothrix cholodnii SP-6]
 gi|170775225|gb|ACB33364.1| binding-protein-dependent transport systems inner membrane
           component [Leptothrix cholodnii SP-6]
          Length = 255

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 78/247 (31%), Gaps = 14/247 (5%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI----VNHFTYQDVLYVIWLGCIT 386
             Q    Q   ++L +F   V   +  G    +  +     +     +    V      T
Sbjct: 1   MKQRRLEQASPWILLVFTLLVWQMLCTGFKVSAFIFPSPADIAAALVEHSALVAGHAWRT 60

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  +    ++ ++ + +G  IG      + + P      A P   F P++V        
Sbjct: 61  FWVTMAGFGLSIVVGVLLGFLIGSSRVAYTAVYPLMTAFNALPKAAFVPILVVWFGIGAG 120

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L     + + I+ N+  G +    + ++V        W     + LP   PY+
Sbjct: 121 ----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLMKVGLPRSLPYF 176

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                 A   A+  + VSE+           G+G  +  +           G++++    
Sbjct: 177 YGSLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSSMQMGLAFAGLVVVGAMA 230

Query: 567 LALNRFL 573
           + +  F 
Sbjct: 231 MLMYEFF 237



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 92/255 (36%), Gaps = 17/255 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL F L++  +      +     P        +      +  +A RT    ++   
Sbjct: 10  SPWILLVFTLLVWQMLCTGFKVSAFIFPSPADIAAALVEHSALVAGHAWRTFWVTMAGFG 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S++   +   L   SR     + P++    ++P   F+   VV+F              
Sbjct: 70  LSIVVGVLLGFLIGSSRVAYTAVYPLMTAFNALPKAAFVPILVVWFGIGAGP-------- 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P S+P    ++ 
Sbjct: 122 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLMKVGLPRSLPYFYGSLK 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +  L  +
Sbjct: 182 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSSMQMGLAFAGLVVVGAMAMLMYE 235

Query: 258 L---LFRPMIVWSNK 269
               + +    W+++
Sbjct: 236 FFSVVEKRTTGWAHR 250


>gi|161520882|ref|YP_001584309.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189352935|ref|YP_001948562.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344932|gb|ABX18017.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189336957|dbj|BAG46026.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 363

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 85/266 (31%), Gaps = 10/266 (3%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L      L   +  +R               +  +L  +         +   + +    +
Sbjct: 92  LLFVAATLGPLVPAVRAPLARVRGAGPWLVALPLVLAAWEIATAKTGWLPTPFFAPPQAL 151

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 D   +      T+  + +       +   VG+ IG+   I   + P  ++L   
Sbjct: 152 IEVYVDDWPRLAGSAVNTLKLLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPV 211

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA    PL        +       + L+   T + +     +G ++    + +VA +F  
Sbjct: 212 PATALLPLTFYFFPTSYS----AAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTFGA 267

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +       + +P   P+   G       ++   +V+E+          +GLG Y++ +  
Sbjct: 268 SARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQG 321

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLW 574
             S+  +   +++M      L   L+
Sbjct: 322 WASYVNMYAALIVMALLFSGLIALLF 347



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  LV+    I          P        I +   D   L   A  T   +      
Sbjct: 120 LVALPLVLAAWEIATAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAVNTLKLLALGFAY 179

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F        SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 180 GVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PTSYSAA 231

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  + ++ R   +V+R+F  S       + +P ++P +   + M
Sbjct: 232 AFLIALATGFPVAVLTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFM 291

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 292 GLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLIAL 345

Query: 259 LF 260
           LF
Sbjct: 346 LF 347


>gi|94313066|ref|YP_586275.1| sulfonate/nitrate ABC transporter permease [Cupriavidus
           metallidurans CH34]
 gi|93356918|gb|ABF11006.1| ABC-type sulfonate/nitrate transporter (permease component)
           [Cupriavidus metallidurans CH34]
          Length = 292

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    +  II  +             V      +    LP  A+ +   +L      ++
Sbjct: 49  LVVLATLWEIIARIQDNDLLLPTFLATVRAFGEGVASGELPGKAAVSLTVLLQGYAAGIV 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLAA +R    +L  +  +   +P +  L   +++F             + IF 
Sbjct: 109 LAFALTTLAASTRIGRDLLDTLTAMFNPLPAIALLPLALLWFGLG--------SKSLIFV 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +P  L    R++ L G +    + VP ++P ++  + +  +
Sbjct: 161 LVHSVLWPLALNTYAGFRGVPETLRMAGRNYGLRGLRFVVLILVPAALPAILSGLKIGWA 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G YI     E     +   + T++ +    + L+F
Sbjct: 221 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLATVILIGLAVEGLVF 277



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 6/208 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++  ++       ++   +             +     +    PA    PL
Sbjct: 86  GELPGKAAVSLTVLLQGYAAGIVLAFALTTLAASTRIGRDLLDTLTAMFNPLPAIALLPL 145

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  AG    P   +    ++ + G R+   
Sbjct: 146 ALLWFGLGSKS----LIFVLVHSVLWPLALNTYAGFRGVPETLRMAGRNYGLRGLRFVVL 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  ++G       AW   I +E+           GLG YI ++  +     V 
Sbjct: 202 ILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVF 259

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+  +    LA+   ++  L     R 
Sbjct: 260 AGLATVILIGLAVEGLVFATLERVTVRR 287


>gi|163940069|ref|YP_001644953.1| substrate-binding region of ABC-type glycine betaine transport
           system [Bacillus weihenstephanensis KBAB4]
 gi|163862266|gb|ABY43325.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Bacillus weihenstephanensis KBAB4]
          Length = 503

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|229011549|ref|ZP_04168735.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides DSM
           2048]
 gi|228749704|gb|EEL99543.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides DSM
           2048]
          Length = 503

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|116695803|ref|YP_841379.1| ABC-type sulfonate transporter, permease component [Ralstonia
           eutropha H16]
 gi|113530302|emb|CAJ96649.1| ABC-type sulfonate transporter, permease component [Ralstonia
           eutropha H16]
          Length = 352

 Score = 93.5 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + + +    +    VG+ IG+   I   + P  ++L   P+    
Sbjct: 147 DWRRLGDSALNTLRLLGLGVAYGGLAGFLVGVSIGWSRRIGYWVHPVLRVLGPLPSTALL 206

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +         L+   T + +     +G +     + +VA +   +GW   
Sbjct: 207 PLTFYFFPSSYS----AAVFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGASGWFLV 262

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G     G +++  + +E+          +GLG Y+  +    S+  
Sbjct: 263 LRVAIPAALPQVFVGLFMGLGASFSVLVTAEMMG------VKSGLGWYLTWAQGWASYVN 316

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      +   L+
Sbjct: 317 MYAALIVMALLFSGVITLLF 336



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 91/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  + +    IL         P        I +   D   L   A  T   +   +  
Sbjct: 109 LVALPVALAAWEILTAKTAILPTPFFAPPQALIEVYADDWRRLGDSALNTLRLLGLGVAY 168

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 169 GGLAGFLVGVSIGWSRRIGYWVHPVLRVLGPLPSTALLPLTFYFF--------PSSYSAA 220

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  +  + +   +V+R+   SGW     + +P ++P +   + M
Sbjct: 221 VFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFM 280

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +V +EM+ V        G+G Y+  A      + +  A++ M  +      L
Sbjct: 281 GLGASFSVLVTAEMMGVKS------GLGWYLTWAQGWASYVNMYAALIVMALLFSGVITL 334

Query: 259 LF 260
           LF
Sbjct: 335 LF 336


>gi|325965547|ref|YP_004243451.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471634|gb|ADX75317.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 266

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V +  +IA+ I  P+G  IG    + +   P      A P  +FFP+++      
Sbjct: 77  ATLQAVAIGFLIAAAIGFPLGYAIGRSKFLGAVFDPIVAGAFAIPRVIFFPILLQIFGVG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +   +L  +F     I+ +  AG  A      ++A S  ++  +    I +P + P
Sbjct: 137 VGAQSAMAALAAVF----PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       A+   I++E  +         GLG     +      P +   ++++  
Sbjct: 193 SLMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAA 246

Query: 565 FVLALNRFLW 574
             LA N  LW
Sbjct: 247 IALAGNLALW 256



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 14/249 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           SR I  N++     V ++ +  +L         P D ++ +       S+ ++ + T   
Sbjct: 22  SRVIRDNVWRAAVLVALVLLWALLSSMSDLVASPTDSLNALAKRFADGSIYRHLNATLQA 81

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    +I+    F       +S+ LG V  PI+    +IP + F    +  F      + 
Sbjct: 82  VAIGFLIAAAIGFPLGYAIGRSKFLGAVFDPIVAGAFAIPRVIFFPILLQIFGVGVGAQS 141

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A LAA+F         +  S    +  I   L +++RS  LS  Q    + +P   P 
Sbjct: 142 AMAALAAVF--------PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAPS 193

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + +  S  +  V+ +E            G+G     A    DL  +   ++ +  +
Sbjct: 194 LMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAAI 247

Query: 252 IFLYDQLLF 260
               +  L+
Sbjct: 248 ALAGNLALW 256


>gi|222445288|ref|ZP_03607803.1| hypothetical protein METSMIALI_00916 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434853|gb|EEE42018.1| hypothetical protein METSMIALI_00916 [Methanobrevibacter smithii
           DSM 2375]
          Length = 514

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 69/183 (37%), Gaps = 12/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A II + +GI+I   P  +  +     L+   P+   F  ++      + +  +
Sbjct: 28  LISVVFAIIIGLGLGIFISEYPK-NKWVLAIVNLIYTIPSIALFGFLIPVSGVGNTSAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G     +   E A     T  +    I LP   P+ ++  
Sbjct: 87  ALTIYGLL----PMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHIMSAI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N ++++   +     +   GLG  I       + P +V G +++    + ++
Sbjct: 143 R-------NMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLIVAGSVLISVLAICID 195

Query: 571 RFL 573
             L
Sbjct: 196 LIL 198



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 72/187 (38%), Gaps = 16/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++V +++         ++  +    ++ I++++ +IP +         F  L P   +
Sbjct: 28  LISVVFAIIIGLGLGIFISEYPK-NKWVLAIVNLIYTIPSIAL-------FGFLIPVSGV 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   +A+ A+    +  M  + Y  +  I   + E ++    +  Q    + +P ++P +
Sbjct: 80  G-NTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +           V +  +    + I   G+G  I   I   ++  I+   + +  + 
Sbjct: 139 MSAIR-------NMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLIVAGSVLISVLA 191

Query: 253 FLYDQLL 259
              D +L
Sbjct: 192 ICIDLIL 198


>gi|229023811|ref|ZP_04180296.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1272]
 gi|228737496|gb|EEL88006.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1272]
          Length = 503

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|195940825|ref|ZP_03086207.1| glycine betaine transporter membrane protein [Escherichia coli
           O157:H7 str. EC4024]
          Length = 283

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             ++         A+S R   ++ P+LD MQ+ P   +L   V+ F     G V G  + 
Sbjct: 158 FCVVIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVT 214

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IFA     +  +       +  +P DL E SRSF  S  Q  + + +P +MP ++  + 
Sbjct: 215 IIFA-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVN 269

Query: 198 MSMSGGWFFVVAS 210
            ++      VV +
Sbjct: 270 QTLMLALSMVVIA 282



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 4/143 (2%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              IT+  V+  ++   +I +P+GIW+   P  +  I+P    +   PA V+   +V   
Sbjct: 144 QAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF 203

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                  N+   ++ I      I+   I G +  P D  E + SF  +  +    + LP 
Sbjct: 204 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 259

Query: 502 IFPYYVTGAITACGGAWNASIVS 524
             P  + G       A +  +++
Sbjct: 260 AMPTIMAGVNQTLMLALSMVVIA 282


>gi|293395444|ref|ZP_06639728.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
 gi|291422128|gb|EFE95373.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
          Length = 332

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   ++     ++  +++ + I ++     G+ IG+   I   + P  ++L   P
Sbjct: 122 EVYLTDWPRLLTSLYHSLSLLLLGVAIGTLSGFVSGVAIGWSQRIGYWVHPILRILGPVP 181

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +                L+   T + +     +G +     + +VA +   +
Sbjct: 182 STALLPLCLFIFPSSFG----ASVFLIALATWFPVTVLTWSGVANIDKAYYDVARTLGAS 237

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                 ++ +P   P    G     G +++  IV+E+           G+G Y+  +   
Sbjct: 238 QRFLIFHVAIPAALPSVFVGLFMGLGASFSVLIVAEMVG------VKAGIGFYLQWAQGW 291

Query: 550 GSFPEVVLGVLIMCCF 565
            ++P +   +++M C 
Sbjct: 292 AAYPNMYAALIVMACL 307



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 17/231 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT---LDVHSLPQYASRTTLRMLSAMVI 78
           L+A  L   +  +L        VP        I     D   L      +   +L  + I
Sbjct: 89  LIALPLFFSLWQLLTAKTGVLPVPFFAPPQALIEVYLTDWPRLLTSLYHSLSLLLLGVAI 148

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  FV       S+R+G  + PIL I+  +P    L   +  F + +         A+
Sbjct: 149 GTLSGFVSGVAIGWSQRIGYWVHPILRILGPVPSTALLPLCLFIFPSSFG--------AS 200

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +T   +  + NI +   +V+R+   S     +++ +P ++P +   + M
Sbjct: 201 VFLIALATWFPVTVLTWSGVANIDKAYYDVARTLGASQRFLIFHVAIPAALPSVFVGLFM 260

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            +   +  ++ +EM+ V        GIG Y+  A        +  A++ M 
Sbjct: 261 GLGASFSVLIVAEMVGVKA------GIGFYLQWAQGWAAYPNMYAALIVMA 305


>gi|229133109|ref|ZP_04261945.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST196]
 gi|228650318|gb|EEL06317.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST196]
          Length = 503

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|33599334|ref|NP_886894.1| hypothetical protein BB0345 [Bordetella bronchiseptica RB50]
 gi|33566930|emb|CAE30843.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 260

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 91/255 (35%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P I  ++  +L    I I          P  +++ + I         +   T    + 
Sbjct: 9   LYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNALRIGYVEGQYWPHFLFTLQSTVY 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I      V  T+ A+S      + P +  +QS P +      +V+F      KV+  
Sbjct: 69  GYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASKVVMV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L + F         M  +    +      + ++ ++F+ S    F+++ +P +   +  
Sbjct: 129 ALMSFF--------PMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFA 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S+       V SE I          G+G  I  A    D+  +   + +++ +   
Sbjct: 181 GLQISVVLSLIGAVVSEFISSSQ------GLGYLIQSASVNMDVATMFACLFSLVVIGLT 234

Query: 255 ---YDQLLFRPMIVW 266
                + L R ++ W
Sbjct: 235 GTNLIRFLHRKLVFW 249



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 88/254 (34%), Gaps = 28/254 (11%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLG----------CITMFRVV 391
           F + ++ GV + I W +   I +       T + VL  + +G            T+   V
Sbjct: 8   FLYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNALRIGYVEGQYWPHFLFTLQSTV 67

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              +I   + + VG  +         I P+   L + P     PL++    +   +    
Sbjct: 68  YGYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASK--- 124

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +++   + + +  N + G         ++  +F  +    + ++ LP    +   G  
Sbjct: 125 -VVMVALMSFFPMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFAGLQ 183

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVLA 568
            +   +   ++VSE  S       + GLG  I  ++       +      ++++      
Sbjct: 184 ISVVLSLIGAVVSEFIS------SSQGLGYLIQSASVNMDVATMFACLFSLVVIGLTGTN 237

Query: 569 LNRFLWHPLYLYGT 582
           L RFL   L  +  
Sbjct: 238 LIRFLHRKLVFWEQ 251


>gi|299134754|ref|ZP_07027946.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298590564|gb|EFI50767.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 298

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 10/207 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP  A  +   +L      +    V   LA  +R     L  +  +   +P +  L  
Sbjct: 92  GVLPARAWSSIKVLLMGYAAGVTLAAVLTALAITTRIGTDFLETLTSMFNPLPAIALLPL 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S  W +  + +    ++ R L+ V R++ L G++
Sbjct: 152 ALIWFGLGNG--------SLVFVLVHSVTWAIALNTHSGFLSVSRTLKMVGRNYGLGGFR 203

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P ++  + +  +  W  ++A+E++    +       G +I       D+
Sbjct: 204 YISKILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNSLDI 261

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
             +   +LT++ +  + + ++FR +  
Sbjct: 262 PTVFAGLLTVIIIGLVVENVIFRAIEA 288



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 19/200 (9%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           VL + +   +T+  V+  + I + I                 ++    +    PA    P
Sbjct: 104 VLLMGYAAGVTLAAVLTALAITTRIGT-------------DFLETLTSMFNPLPAIALLP 150

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +      + +    L  +++    W I  N  +G  +     K V  ++ + G+R+  
Sbjct: 151 LALIWFGLGNGS----LVFVLVHSVTWAIALNTHSGFLSVSRTLKMVGRNYGLGGFRYIS 206

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I++P  FP  +TG       AW   I +E+             G +I E+      P V
Sbjct: 207 KILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNSLDIPTV 264

Query: 556 VLGVLIMCCFVLALNRFLWH 575
             G+L +    L +   ++ 
Sbjct: 265 FAGLLTVIIIGLVVENVIFR 284


>gi|300786950|ref|YP_003767241.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299796464|gb|ADJ46839.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 293

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 10/267 (3%)

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
                P +       R     R    +   +L     +       W+ V     +     
Sbjct: 10  GRALQPDAGLRGVSVRPGPRTRDRLRDGVDRLWRPLALIAACGFLWWLVTALGGVPGYLV 69

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                      +   Y+      T    ++  ++A++  +   + + +   +   + P  
Sbjct: 70  PSPGRTWQVMVEQGGYLWQNTLTTTGETLLGFVLAAVAGVLAAVVMVYSVTVERTLYPLL 129

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                 P     PL +  +  +   P + +++LM     + I+ + + G  +  ++  E+
Sbjct: 130 LFAQVVPKIAIAPLFIVWLG-FGTPPKIVVAVLM---AFFPIVISGVTGLRSVDSELLEL 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            ++      + +R I  P   P+  +G   A   A   ++V E            GLG  
Sbjct: 186 VATMGAKPLQTFRKIRFPASLPHLFSGLKVAATLAVTGAVVGEFVG------ANEGLGYV 239

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I ++      P +  G++IM    + L
Sbjct: 240 ILQANGNLDTPMLFAGLIIMSLLGVLL 266



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 90/258 (34%), Gaps = 21/258 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGI-------INILLHGIQETTVPRDIVDIVPITLD 57
           ++ P   +R    +  D L   L +         +   L G+    VP        +   
Sbjct: 23  SVRPGPRTRDRLRDGVDRLWRPLALIAACGFLWWLVTALGGVPGYLVPSPGRTWQVMVEQ 82

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q    TT   L   V++ +   + A +   S  +   L P+L   Q +P +    
Sbjct: 83  GGYLWQNTLTTTGETLLGFVLAAVAGVLAAVVMVYSVTVERTLYPLLLFAQVVPKIAIAP 142

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +V+     P K++ A L A F         +  S    L ++  +L E+  +      
Sbjct: 143 LFIVWLGFGTPPKIVVAVLMAFF--------PIVISGVTGLRSVDSELLELVATMGAKPL 194

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F  +  P S+P L   + ++        +A    VVG+ V    G+G  I  A    D
Sbjct: 195 QTFRKIRFPASLPHLFSGLKVA------ATLAVTGAVVGEFVGANEGLGYVILQANGNLD 248

Query: 238 LLAILYAMLTMLGVIFLY 255
              +   ++ M  +  L 
Sbjct: 249 TPMLFAGLIIMSLLGVLL 266


>gi|323525534|ref|YP_004227687.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323382536|gb|ADX54627.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 276

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 86/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       +    L      +  R++   V   L   V  +    SR     ++
Sbjct: 57  LPPPARVYATFVDLVQSGDLLHNTLVSLQRVVCGFVAGTLGGVVLGSALGLSRSFEAYVL 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P  + +  IP+LG+L F ++      P K I         I  + +  +T S  Q     
Sbjct: 117 PAFNAVVQIPVLGWLPFLLLLVGVGEPLKYI--------LIAHAALVPVTLSTLQGFRGA 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L+E +R F  + WQ+  ++ +P ++P L   + ++ +  W  +V  E++   +    
Sbjct: 169 PVTLDEAARVFGYTRWQRIVHVVLPSAVPTLATGVRLAFTKAWLALVVVELVASSE---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ A++ +  + F  ++ L
Sbjct: 225 --GLGYLIVYGRQLFQLDLVMAAVVVVGVIGFAINRAL 260



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 16/255 (6%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA--IGIAWQSI----GYIVNHFTYQDVLY 378
              P    +        + L    F +         IA Q +                  
Sbjct: 16  RSTPTRRWRALGWALAPWALPAVLFALWWVGCERGWIAPQILPPPARVYATFVDLVQSGD 75

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +++ RVV   +  ++  + +G  +G      + + P    +   P   + P ++
Sbjct: 76  LLHNTLVSLQRVVCGFVAGTLGGVVLGSALGLSRSFEAYVLPAFNAVVQIPVLGWLPFLL 135

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V            +L+       +  + + G    P    E A  F  T W+   +++
Sbjct: 136 LLVGVG----EPLKYILIAHAALVPVTLSTLQGFRGAPVTLDEAARVFGYTRWQRIVHVV 191

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   TG   A   AW A +V E+ +       + GLG  I    +      V+  
Sbjct: 192 LPSAVPTLATGVRLAFTKAWLALVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAA 245

Query: 559 VLIMCCFVLALNRFL 573
           V+++     A+NR L
Sbjct: 246 VVVVGVIGFAINRAL 260


>gi|300776864|ref|ZP_07086722.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Chryseobacterium gleum
           ATCC 35910]
 gi|300502374|gb|EFK33514.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Chryseobacterium gleum
           ATCC 35910]
          Length = 522

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 72/181 (39%), Gaps = 15/181 (8%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++       L ++ ++L   ++    I+Q+IP +  L F +  F              A
Sbjct: 36  AIVIGVPLGILISRKKKLSSPVLGAAGILQTIPSIALLGFMIPVFGIG--------PKPA 87

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I A+    +  +  + Y  +  +   + E +++  ++  Q  + + +P +MP ++  +  
Sbjct: 88  IAALLIYALLPIIRNTYTGITGVDPAVIESAKAMGMNRRQLLFKVKLPLAMPVIIAGIRT 147

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +       V+   +  +    +   G+G +I   I   +   IL   +    +  + DQ+
Sbjct: 148 A------AVINVGVATLASF-VAAGGLGEFIFGGISLNNTNMILAGAIPAALLAVVLDQI 200

Query: 259 L 259
           +
Sbjct: 201 I 201



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I +P+GI I  +  +SS +   A +L   P+      ++         P   ++ L+
Sbjct: 36  AIVIGVPLGILISRKKKLSSPVLGAAGILQTIPSIALLGFMIPVFGIG---PKPAIAALL 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I+     I+ N   G +       E A +  +   +    + LP   P  + G  TA   
Sbjct: 93  IY-ALLPIIRNTYTGITGVDPAVIESAKAMGMNRRQLLFKVKLPLAMPVIIAGIRTAAVI 151

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++   + G       GLG +I       +   ++ G +      + L++ +
Sbjct: 152 NVGVATLASFVAAG-------GLGEFIFGGISLNNTNMILAGAIPAALLAVVLDQII 201


>gi|73541791|ref|YP_296311.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119204|gb|AAZ61467.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 263

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I ++  + VG+W+   P  S+ + P+ + + + P  +  P+       
Sbjct: 64  GVTLLETVLAFGIGTVAGLGVGLWLALSPLTSAILDPYVKAMNSMPRVILAPIFAVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A        +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANRQQLLRHVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN 570
            F L L+
Sbjct: 234 AFALVLD 240



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L  + A  I  +         A S     +L P +  M S+P +       V+F
Sbjct: 62  HLGVTLLETVLAFGIGTVAGLGVGLWLALSPLTSAILDPYVKAMNSMPRVILAPIFAVWF 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   +   +R    +  Q   ++
Sbjct: 122 GLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANRQQLLRHV 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 174 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFA 227

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 228 GIVVLTAFALVLDWMVGAGEKRLMKWQPK 256


>gi|170760783|ref|YP_001786759.1| putative ABC transporter, permease protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169407772|gb|ACA56183.1| putative ABC transporter, permease protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 253

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   REDRTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P      + +      
Sbjct: 67  KSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWFK-- 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 125 SSSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 104/249 (41%), Gaps = 9/249 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M +  I       ++      ++ +V +  + ++ ++       P+ + + + I      
Sbjct: 1   MKISTIREDRTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRY 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                 ++ +R++  ++IS++       +A  +  +  +L P++  +++ P++  +   +
Sbjct: 61  FWLSVFKSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIAL 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F          +   AIF         +  ++   + ++ + L E++  + +      
Sbjct: 121 VWF---------KSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYIL 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  ++M +  GW   VASE++      I L  + +   LA +E     
Sbjct: 172 INIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWT 231

Query: 241 ILYAMLTML 249
           I+  +L+++
Sbjct: 232 IVVVLLSLI 240


>gi|209522080|ref|ZP_03270733.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209497489|gb|EDZ97691.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 274

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 15/213 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   V+  +  + I + VG+W+   P  S+   P+ +   + P  +
Sbjct: 64  WFTGGEIYLHLWITLVETVLAFVFGTAIGLGVGLWLALAPTASALFDPYVKAANSMPRVI 123

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G           A        +
Sbjct: 124 LAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANRKQ 179

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ LP    +  +   T+ G A+  S+V E            G+G  I ++      
Sbjct: 180 LLRFVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDI 233

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             V  G+L++  F L L+  +         R L
Sbjct: 234 NTVFAGILVLTAFALILDAIV-----GMAERRL 261



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P+ ++  +        +  +   T +  + A V             A +     +  P +
Sbjct: 54  PQKVLQRIWEWFTGGEIYLHLWITLVETVLAFVFGTAIGLGVGLWLALAPTASALFDPYV 113

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               S+P +       V+F      KV        F +F        F++YQ +  +   
Sbjct: 114 KAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPV 165

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R    +  Q   ++ +P +M  +  ++  S+   +   V  E +          G
Sbjct: 166 VLANARMLGANRKQLLRFVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARG 219

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +G  I  A    D+  +   +L +     + D ++    R ++ W  +
Sbjct: 220 VGYLILQAEGTFDINTVFAGILVLTAFALILDAIVGMAERRLMKWQPR 267


>gi|163789860|ref|ZP_02184296.1| hypothetical protein CAT7_06493 [Carnobacterium sp. AT7]
 gi|159874800|gb|EDP68868.1| hypothetical protein CAT7_06493 [Carnobacterium sp. AT7]
          Length = 505

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 25/206 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             ++ I+++     A    + +R+  V++ I  I Q+IP L  L  
Sbjct: 13  SELLTALIEHMQLSFISLFIAVIIAVPLAIYLTRHKRMATVMIQITSIFQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               + A+ A+    +  +  + Y  +  +   L E + +  ++ W+
Sbjct: 73  MIPLVGIG--------TVPAVIALVIYALLPILRNAYTGIMEVDPSLNEAADAMGMNRWR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           K   + +P +MP ++  +  +M           ++++G   I    IG+      I L I
Sbjct: 125 KLTKVQIPIAMPIIMAGIRNAM-----------VLIIGTGTIAAL-IGAGGLGSLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   IL   +    +  L+D LL
Sbjct: 173 DRGNNHLILLGAIPAALLAILFDYLL 198



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA II +P+ I++     +++ +     +    P+     L++  V    +   +
Sbjct: 27  FISLFIAVIIAVPLAIYLTRHKRMATVMIQITSIFQTIPSLALLGLMIPLVGIGTVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + +P   P  + G 
Sbjct: 87  ALVIYALL----PILRNAYTGIMEVDPSLNEAADAMGMNRWRKLTKVQIPIAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A         ++ +   G +               ++G+   ++LG +      +  +
Sbjct: 143 RNAMVLIIGTGTIAALIGAGGLGSLIL-------LGIDRGNNHLILLGAIPAALLAILFD 195

Query: 571 RFL 573
             L
Sbjct: 196 YLL 198


>gi|307709712|ref|ZP_07646164.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus mitis SK564]
 gi|307619610|gb|EFN98734.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus mitis SK564]
          Length = 506

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ + + +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVSLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVSLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|254819621|ref|ZP_05224622.1| putative aliphatic sulfonates transport permease protein SsuC
           [Mycobacterium intracellulare ATCC 13950]
          Length = 275

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 104/260 (40%), Gaps = 22/260 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-------SLPQYASRTTLR 71
            ++++     + ++ +   G     +P+D++    + ++          L      +++R
Sbjct: 30  KWEIVRIASPLALLALWQLGSAVGVIPQDVLPAPSLIVEAGVELIRDGQLAAALQVSSVR 89

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++  +V+  +           SR L   + P + +++++P LG +   +++F        
Sbjct: 90  VVEGLVLGGVIGVGAGAAVGLSRWLEATVDPPMQMIRALPHLGLIPLFILWFGIG----- 144

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              EL  +  +    V+ +  + + ++  +   + E ++    S  Q+   + VP + P 
Sbjct: 145 ---ELPKVLLVALGVVFPLYLNTFSAIRQVDPKMVETAQVLGFSFAQRLTRILVPSAAPQ 201

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++     S++  W  ++ +E I          GIG  I  A     +  +++ +     +
Sbjct: 202 VLVGFRQSLAIAWLTLIVAEQI------NADKGIGFLINNARDFLRIDIVIFGLTIYALL 255

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
             + D ++ R +   + ++R
Sbjct: 256 GIVTDAIV-RLIERRALRYR 274



 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 10/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              + + + P  Q++ A P     PL +       L       LL+  G  + +  N  +
Sbjct: 111 SRWLEATVDPPMQMIRALPHLGLIPLFILWFGIGEL----PKVLLVALGVVFPLYLNTFS 166

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     E A     +  +    I++P   P  + G   +   AW   IV+E  +  
Sbjct: 167 AIRQVDPKMVETAQVLGFSFAQRLTRILVPSAAPQVLVGFRQSLAIAWLTLIVAEQINAD 226

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  G+G  I  + +      V+ G+ I     +  +  +
Sbjct: 227 K------GIGFLINNARDFLRIDIVIFGLTIYALLGIVTDAIV 263


>gi|209519701|ref|ZP_03268489.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209499845|gb|EDZ99912.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 354

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+  +      +   +    +  ++    +G+ IG+   +   + P  +L+   PA  + 
Sbjct: 149 DLPRLAASVAHSFVLLSYGYVAGALTGFVIGVAIGWSKAVGYWVHPVLRLIGPLPATAWL 208

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL                  L+   T + +     +G ++  + + +VA +         
Sbjct: 209 PLAFFFFPSSFS----ASVFLIALATAFPVAVLTWSGVASVNSAYYDVARTLGARPSFLI 264

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G     G ++    V+E+           GLG Y+  +    ++P 
Sbjct: 265 LRVAIPAALPSVFVGLFMGLGASFAVLFVAEMMG------VKAGLGWYLQWAQGWAAYPN 318

Query: 555 VVLGVLIMCCFVLALNRFLWH 575
           +   +L+M     AL   L+ 
Sbjct: 319 MYAALLVMALMCSALITLLFR 339



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 92/252 (36%), Gaps = 20/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS---RTTLRMLSAMVI 78
           LLA  L I    I    ++    P        I +    LP+ A+    + + +    V 
Sbjct: 111 LLALSLGITGWEIATAQLEWLPRPFFAPPQALIAVYADDLPRLAASVAHSFVLLSYGYVA 170

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  FV       S+ +G  + P+L ++  +P   +L     +           +  A+
Sbjct: 171 GALTGFVIGVAIGWSKAVGYWVHPVLRLIGPLPATAWLPLAFFF--------FPSSFSAS 222

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  + ++     +V+R+           + +P ++P +   + M
Sbjct: 223 VFLIALATAFPVAVLTWSGVASVNSAYYDVARTLGARPSFLILRVAIPAALPSVFVGLFM 282

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +  +EM+ V        G+G Y+  A        +  A+L M  +      L
Sbjct: 283 GLGASFAVLFVAEMMGVKA------GLGWYLQWAQGWAAYPNMYAALLVMALMCSALITL 336

Query: 259 LFR---PMIVWS 267
           LFR    ++ W 
Sbjct: 337 LFRVRDRLLAWQ 348


>gi|99078012|ref|YP_611270.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99035150|gb|ABF62008.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 269

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 80/258 (31%), Gaps = 20/258 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV---- 376
            + R      F       R    + +  F V+  +            +      DV    
Sbjct: 5   SLSRQPLEVRFRGGGFAPRNRRWVGLAVFVVLIALVEWGTRSGFISALTLPKPSDVFATL 64

Query: 377 ------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                          ++ R+ V   + + + + VG+ IG   +I + + P    +   P 
Sbjct: 65  VELWQSGLFFQHMIPSLTRLAVGAALGASVGVGVGVLIGLFSYIRAGLVPLMAAIFPIPK 124

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL V        +       L+ FGT    +                +  SF ++ 
Sbjct: 125 IALLPLFVIWFGIDEGSK----YALIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSW 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R I+LPG  P  ++G   +   A    + +E+           G+GAYI E+    
Sbjct: 181 LSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG------AQYGIGAYILEAGSLY 234

Query: 551 SFPEVVLGVLIMCCFVLA 568
               +  GV+I+    + 
Sbjct: 235 DLERLFAGVVILSLLGVL 252



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 24/262 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQYASR 67
             P     +   + + +I ++  G +           P D+   +          Q+   
Sbjct: 20  FAPRNRRWVGLAVFVVLIALVEWGTRSGFISALTLPKPSDVFATLVELWQSGLFFQHMIP 79

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     +          L      +   LVP++  +  IP +  L   V++F    
Sbjct: 80  SLTRLAVGAALGASVGVGVGVLIGLFSYIRAGLVPLMAAIFPIPKIALLPLFVIWFGIDE 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K           I          + Y ++ N+ R L  + +SF LS       + +P 
Sbjct: 140 GSKYA--------LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWLSIVRKIVLPG 191

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MPG++  + +S++     +VA+EM+          GIG+YI  A    DL  +   ++ 
Sbjct: 192 AMPGILSGLRISLAIAIILLVAAEMLG------AQYGIGAYILEAGSLYDLERLFAGVVI 245

Query: 248 MLGVIFL---YDQLLFRPMIVW 266
           +  +  L      ++ R ++ W
Sbjct: 246 LSLLGVLTSGTIGMIERRLLNW 267


>gi|296133962|ref|YP_003641209.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296032540|gb|ADG83308.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 265

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+    + + I + + +  G  +G    ++   +P    L   P     P+ V      
Sbjct: 67  ITLKEAFLGLTIGTFLGMAGGFILGRIELLAKIFEPIITALYGIPKLALAPVFVLWFGLG 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   ++LSLLM+F   + + FN   G  +   +             + +  ++LP   P
Sbjct: 127 -IESKVFLSLLMVF---YLVFFNTYGGIKSVDPNLVGAVKLMGANELQLFTKVVLPSCVP 182

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + + G     G +   +IV E          + GLG  I  +T       V+  ++++  
Sbjct: 183 WILAGLRGGLGASLLGAIVGEYIG------ASAGLGWMIQYATGTYQINRVMSCIVLLLF 236

Query: 565 FVLALN 570
             L LN
Sbjct: 237 TGLILN 242



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 80/237 (33%), Gaps = 17/237 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I   +        L ++ + T       + I          +  +   L  +  P
Sbjct: 43  SQPSQIFKDLKHLFISGELGKHLTITLKEAFLGLTIGTFLGMAGGFILGRIELLAKIFEP 102

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+  +  IP L      V++F      KV  + L   + +F        F+ Y  + ++ 
Sbjct: 103 IITALYGIPKLALAPVFVLWFGLGIESKVFLSLLMVFYLVF--------FNTYGGIKSVD 154

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +L    +    +  Q F  + +P  +P ++  +   +       +  E I         
Sbjct: 155 PNLVGAVKLMGANELQLFTKVVLPSCVPWILAGLRGGLGASLLGAIVGEYIGASA----- 209

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTT 276
            G+G  I  A     +  ++  ++ +L    + +    +L + ++ W  +   +  +
Sbjct: 210 -GLGWMIQYATGTYQINRVMSCIVLLLFTGLILNTGLKILEKRLLKWRPRVDYDTIS 265


>gi|291458320|ref|ZP_06597710.1| putative ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418853|gb|EFE92572.1| putative ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 256

 Score = 93.5 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 81/200 (40%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     ++  +V  I+I+  + + +G+ +G    +   + P    ++  P+ + 
Sbjct: 55  GDRYIMLLNLIASLSILVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILL 114

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P  +     +          L+++ + W  +F  I G       + + A +  + G+R 
Sbjct: 115 SPFALLLAPNFRT----ASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRK 170

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  ++G + +  G +   + +E+      +    G+G Y+ ++   G + 
Sbjct: 171 LFRVMLPAASPSIISGFVNSLSGTFVMLVYAEM------YGAEYGMGYYVRQNAMLGLYD 224

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +   G + M   ++ + +  
Sbjct: 225 KTWAGFIFMIVILVIIMQIF 244



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 14/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +   ++ A+VISL    +   +   +R L   L P+L  +  +P +    F ++   
Sbjct: 64  LIASLSILVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILLSPFALLL-- 121

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       A++F I    VW   F     +  I R   + + +  L G++K + + 
Sbjct: 122 ------APNFRTASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRKLFRVM 175

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++   + S+SG +  +V +EM           G+G Y+               
Sbjct: 176 LPAASPSIISGFVNSLSGTFVMLVYAEMYG------AEYGMGYYVRQNAMLGLYDKTWAG 229

Query: 245 MLTMLGVIFLYDQLLFR 261
            + M+ ++ +  Q+  +
Sbjct: 230 FIFMIVILVIIMQIFEK 246


>gi|223932757|ref|ZP_03624755.1| binding-protein-dependent transport systems inner membrane
           component [Streptococcus suis 89/1591]
 gi|330832056|ref|YP_004400881.1| binding-protein-dependent transport systems inner membrane
           component [Streptococcus suis ST3]
 gi|223898590|gb|EEF64953.1| binding-protein-dependent transport systems inner membrane
           component [Streptococcus suis 89/1591]
 gi|329306279|gb|AEB80695.1| binding-protein-dependent transport systems inner membrane
           component [Streptococcus suis ST3]
          Length = 252

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 81/241 (33%), Gaps = 23/241 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------------DVLYVIWLGCITMFRVVV 392
            FW      VA+ I W    Y     ++              D  ++      ++  V  
Sbjct: 9   YFWLTFSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFF 68

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
                 ++ +P  +++ +     + + P+ Q +   P   + PLVV       L      
Sbjct: 69  GFTSGFLLSVPNALFMSWYSPYRNIVYPWIQYIRNIPPLAYVPLVVISAGVGLLPQ---- 124

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +++   T   +   +  G      +  + A     + +  ++ I++P   P+ +T    
Sbjct: 125 VIVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPASIPFIMTAVRL 184

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
               +    I +E          T+G+G  I           ++L ++++    L LN+ 
Sbjct: 185 GTSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKL 238

Query: 573 L 573
           +
Sbjct: 239 V 239



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 95/253 (37%), Gaps = 17/253 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F L+  +++   ++      +       + + + I +D   + +    +   +       
Sbjct: 14  FSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFFGFTSG 73

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L +   A   +       ++ P +  +++IP L ++   V+              L  +
Sbjct: 74  FLLSVPNALFMSWYSPYRNIVYPWIQYIRNIPPLAYVPLVVISAGVGL--------LPQV 125

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I  +    MT ++YQ + NI  +L + +R    S ++ F  + VP S+P ++  + + 
Sbjct: 126 IVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPASIPFIMTAVRLG 185

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256
            S     ++A+E      +     G+G  I       D   +L  ++ +  +  L +   
Sbjct: 186 TSISLTTIIAAE------STGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKLV 239

Query: 257 QLLFRPMIVWSNK 269
            L+ R +  W  K
Sbjct: 240 DLIERKLTGWQQK 252


>gi|289167365|ref|YP_003445634.1| ABC transporter, permease [Streptococcus mitis B6]
 gi|288906932|emb|CBJ21766.1| ABC transporter, permease [Streptococcus mitis B6]
          Length = 506

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|157738204|ref|YP_001490888.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157700058|gb|ABV68218.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 260

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 100/249 (40%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L +  +   L+G      P+D    +   L   S  +    T  R      ISL+ 
Sbjct: 25  IFLFLALWDLGNQLYGNLVLPSPKDTFTTLFSILTDDSTIENVLITIKRAFLGFGISLVI 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   +A       ++  PI+ I+  +P + ++   +++F          +++  +F +
Sbjct: 85  GSILGLVAGLFVTASIMSRPIVTILVGMPPIAWIVLAMIWFG--------MSDMTVVFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +     Q    I  DL++++ SF L    K + L +P     +    + ++  
Sbjct: 137 IIASFPIIFVGALQGTRTIEGDLKQMADSFHLPFKMKIFDLYLPHIFSYIFPAYISALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  VV +E++   +      GIG+ +A+A  + D    L  ++ M+G +   + L+F P
Sbjct: 197 SWKIVVMAELLSSSN------GIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEP 250

Query: 263 MIVWSNKFR 271
           +      +R
Sbjct: 251 IKREVEAWR 259



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 92/260 (35%), Gaps = 10/260 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R +  I   FP        +    ++    W          +           F+     
Sbjct: 2   RFILKILKDFPAYLWSGWGSLASIFLFLALWDLGNQLYGNLVLPSPKDTFTTLFSILTDD 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             I    IT+ R  +   I+ +I   +G+  G     S   +P   +L   P   +  L 
Sbjct: 62  STIENVLITIKRAFLGFGISLVIGSILGLVAGLFVTASIMSRPIVTILVGMPPIAWIVLA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +       +     +   +I  +   I    + G      D K++A SFH+        +
Sbjct: 122 MIWFGMSDMT----VVFTVIIASFPIIFVGALQGTRTIEGDLKQMADSFHLPFKMKIFDL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP IF Y     I+A G +W   +++E+ S       + G+GA +A +  +   P  + 
Sbjct: 178 YLPHIFSYIFPAYISALGMSWKIVVMAELLS------SSNGIGASLAIARSQLDTPVALA 231

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            V+IM   +L +   ++ P+
Sbjct: 232 LVVIMIGSLLFIEYLIFEPI 251


>gi|114761135|ref|ZP_01441050.1| Binding-protein-dependent transport systems inner membrane
           component [Pelagibaca bermudensis HTCC2601]
 gi|114545383|gb|EAU48385.1| Binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. HTCC2601]
          Length = 256

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 20/264 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTL 70
           R   P I  ++ F  V  I   +          P  I  I   + LD  +L ++AS T  
Sbjct: 5   RHFAPGIVSVVGFFAVWEIYCRMSGINPLILPPPSQIGAIFFDVALDPRTL-RHASITLT 63

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L+   ++ +         A S  +   + P +   Q IP +  +   VV+F      K
Sbjct: 64  ETLAGFGLATVIGMTVGWAVAASPLIERAVHPFIVASQVIPKVALVPLFVVWFGFGMTSK 123

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++ A + A F +          +    L ++     +V  S + + WQ+ W L +P ++P
Sbjct: 124 IVVAAVIAFFPVLV--------NTVLGLRSVQPGHADVFHSLKATLWQRIWLLQIPSALP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  M M++      V+A+   VVG+ +    G+G      +       +   ++ +  
Sbjct: 176 AILAGMEMAI------VLATIGAVVGEFLGGSSGLGYMAVATMNAFQTDRLFVIIILLTL 229

Query: 251 VIFLYDQLLF---RPMIVWSNKFR 271
           + F+   ++    R ++ WS+  +
Sbjct: 230 IGFVLYAMMAGLKRALVSWSDNQK 253



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 10/190 (5%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +    IT+   +    +A++I + VG  +   P I   + PF       P     PL V 
Sbjct: 55  LRHASITLTETLAGFGLATVIGMTVGWAVAASPLIERAVHPFIVASQVIPKVALVPLFVV 114

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              +   +      ++      + +L N + G  +      +V  S   T W+    + +
Sbjct: 115 WFGFGMTSK----IVVAAVIAFFPVLVNTVLGLRSVQPGHADVFHSLKATLWQRIWLLQI 170

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G   A   A   ++V E          ++GLG     +        + + +
Sbjct: 171 PSALPAILAGMEMAIVLATIGAVVGEFLGG------SSGLGYMAVATMNAFQTDRLFVII 224

Query: 560 LIMCCFVLAL 569
           +++      L
Sbjct: 225 ILLTLIGFVL 234


>gi|300855828|ref|YP_003780812.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
           13528]
 gi|300435943|gb|ADK15710.1| predicted ABC transporter, permease component [Clostridium
           ljungdahlii DSM 13528]
          Length = 250

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV++ I+++  I I  G+  G    I   ++P    + + P      + +       
Sbjct: 64  SILRVIIGILLSIAIGIITGVIAGMNKSIEELLEPLVVTVKSTPVISIIIIALVWF---- 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N +  +    I      I  NVI G  +      ++AS +++      + I LP I  Y
Sbjct: 120 -NSSNVVIFTAILICFPIIYTNVIEGIKSVDKYLIQMASVYNVKQKYVIKDIYLPSIKNY 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G     G  W  S+ SEV S  +       +G  +  +      PE+    +++   
Sbjct: 179 IISGIFMCLGIGWKVSVASEVLSTPNYS-----IGLNLLNAKTTLETPELFAWTIVIVIL 233

Query: 566 VLALNRFL 573
                +  
Sbjct: 234 SFIFEKIF 241



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 102/238 (42%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ ++L+  + ++ ++       P +++  + I +  +   +    + LR++  +++S+ 
Sbjct: 18  LIFWMLIWELCSLFMNNSLLLPSPFEVLKTLIILMGKNYFWKSVFNSILRVIIGILLSIA 77

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +A  ++ +  +L P++  ++S P++  +   +V+F +             IF 
Sbjct: 78  IGIITGVIAGMNKSIEELLEPLVVTVKSTPVISIIIIALVWFNSSN---------VVIFT 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++ + + ++ + L +++  + +        + +P     ++  + M + 
Sbjct: 129 AILICFPIIYTNVIEGIKSVDKYLIQMASVYNVKQKYVIKDIYLPSIKNYIISGIFMCLG 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GW   VASE++   +       IG  +  A    +   +    + ++ + F+++++ 
Sbjct: 189 IGWKVSVASEVLSTPNYS-----IGLNLLNAKTTLETPELFAWTIVIVILSFIFEKIF 241


>gi|148258675|ref|YP_001243260.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410848|gb|ABQ39354.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 256

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 87/246 (35%), Gaps = 17/246 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-------TM 387
            +  R +  L +    VV  +  G+A  +  ++         LY +            + 
Sbjct: 10  PAASRWAGWLALAAVLVVWQLVGGLALVNPLFLPTPAMIMRALYRLAASGALWQHVSASF 69

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+V    + +   I VG  IG      S    F   L   P     PL++  +      
Sbjct: 70  VRIVAGWALGTASGIAVGFAIGLWRIARSIGITFVSALFPIPKIAVLPLLILWLGIG--- 126

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                   +  G  +    +V +G  A P +   +A SF +      R +I PG  P  +
Sbjct: 127 -EQPKIATIALGVFFSTTISVYSGVDAVPRNLIRMAQSFDVPFPTIVRKVIWPGALPSIL 185

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A    + +E+          TG+G ++ ++       +++ G+L++  F L
Sbjct: 186 AGFRITASVALMLVVSAEMIG------AETGIGTFVLQAGNLMQTDQLMAGILVLSLFGL 239

Query: 568 ALNRFL 573
           A+ R +
Sbjct: 240 AVGRLI 245



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 91/245 (37%), Gaps = 15/245 (6%)

Query: 16  FPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +     L A ++V  ++  + L        P  I+  +       +L Q+ S + +R+++
Sbjct: 15  WAGWLALAAVLVVWQLVGGLALVNPLFLPTPAMIMRALYRLAASGALWQHVSASFVRIVA 74

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              +               R    + +  +  +  IP +  L   +++            
Sbjct: 75  GWALGTASGIAVGFAIGLWRIARSIGITFVSALFPIPKIAVLPLLILWLGIG-------- 126

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   I  I     ++ T S+Y  +  +PR+L  +++SF +        +  P ++P ++ 
Sbjct: 127 EQPKIATIALGVFFSTTISVYSGVDAVPRNLIRMAQSFDVPFPTIVRKVIWPGALPSILA 186

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              ++ S     VV++EMI          GIG+++  A        ++  +L +      
Sbjct: 187 GFRITASVALMLVVSAEMIGAET------GIGTFVLQAGNLMQTDQLMAGILVLSLFGLA 240

Query: 255 YDQLL 259
             +L+
Sbjct: 241 VGRLI 245


>gi|159043240|ref|YP_001532034.1| two-component system, permease [Dinoroseobacter shibae DFL 12]
 gi|157911000|gb|ABV92433.1| two-component system, permease component [Dinoroseobacter shibae
           DFL 12]
          Length = 258

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 105/266 (39%), Gaps = 14/266 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + +    +  L+   +   +  + L        P ++  I+        L  + ++T  R
Sbjct: 7   TEKTRTTLISLVMLGIAWQLAALGLADSSVLPPPAEVWAILVGEWRSGELVFHITQTLQR 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +A  +++    V   +  K   L   L P +    ++P L  +    ++         
Sbjct: 67  VAAAFFLAMGIGSVIGVVLGKMPALDRWLDPWVVFFLNLPALVVIVLCYLWIGLN----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E AAI A+  ++   +   M + + ++  D+ E++R +R S W++  ++ +P   P 
Sbjct: 122 ---ETAAIVAVALNKTAMVIVIMREGVRSLDPDVAEMARVYRFSAWKRLRHVLIPQLAPF 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   +   ++  W  V+  E +   +      G+G  I L  +  +   +L   L+ + V
Sbjct: 179 ISTAVRNGLAVIWKIVLVVEFLGRSN------GVGFQIHLYFQLFETGYVLAYALSFVAV 232

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTG 277
           +   +  L +P    + K+R  +T  
Sbjct: 233 MLALEYALVQPWEARARKWRRVQTPA 258



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 24/251 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------------TMFRVVVLIII 396
           ++  V +GIAWQ     +   +       +W   +              T+ RV     +
Sbjct: 14  LISLVMLGIAWQLAALGLADSSVLPPPAEVWAILVGEWRSGELVFHITQTLQRVAAAFFL 73

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I   +G+ +G  P +   + P+       PA V   ++V C  +  LN    +  + 
Sbjct: 74  AMGIGSVIGVVLGKMPALDRWLDPWVVFFLNLPALV---VIVLCYLWIGLNETAAIVAVA 130

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  T   I+     G  +   D  E+A  +  + W+  R++++P + P+  T        
Sbjct: 131 LNKTAMVIVIM-REGVRSLDPDVAEMARVYRFSAWKRLRHVLIPQLAPFISTAVRNGLAV 189

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
            W   +V E         R+ G+G  I    +      V+   L     +LAL   L  P
Sbjct: 190 IWKIVLVVEFLG------RSNGVGFQIHLYFQLFETGYVLAYALSFVAVMLALEYALVQP 243

Query: 577 LYLYGTRCLRL 587
                 +  R+
Sbjct: 244 WEARARKWRRV 254


>gi|288555332|ref|YP_003427267.1| ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288546492|gb|ADC50375.1| ABC transporter (permease) (NSB type) [Bacillus pseudofirmus OF4]
          Length = 251

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 101/246 (41%), Gaps = 17/246 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            +A + +  II  +               V++     +   L    + +  R+     ++
Sbjct: 11  FIALIAIWEIIYRIDLFQTRMFPSPLLSFVELYRGFFETGILTAALTTSLGRISLGFALA 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++   +   + A S+     L  ++  +QS+P + +L   +V F         G  LA +
Sbjct: 71  VIIGSILGIILATSKLADETLGSLVVALQSVPSIVWLPLALVMFQ--------GGSLAIL 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F I     W MT +M   + N+   L   +R+    G +  W + +P S+P  +  + ++
Sbjct: 123 FVIILGGTWPMTMNMRMGIKNVQPLLIRAARTMGYKGLELVWKVLIPASIPSALTGVRLA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            + GW  ++A+E++  G       G+G  +  A    ++  ++  M+ +  +  + + L+
Sbjct: 183 WAFGWRALMAAELLGRG-------GLGRTLLDARDFFNMELVIAIMIIIAVIGLIVEYLI 235

Query: 260 FRPMIV 265
           F P+  
Sbjct: 236 FNPIER 241



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 83/222 (37%), Gaps = 11/222 (4%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + ++  +  + +   +      ++ R+ +   +A II   +GI +         +    
Sbjct: 36  LLSFVELYRGFFETGILTAALTTSLGRISLGFALAVIIGSILGIILATSKLADETLGSLV 95

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P+ V+ PL +          +L +  ++I G  W +  N+  G           
Sbjct: 96  VALQSVPSIVWLPLALVMFQGG----SLAILFVIILGGTWPMTMNMRMGIKNVQPLLIRA 151

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +    G      +++P   P  +TG   A    W A + +E+   G       GLG  
Sbjct: 152 ARTMGYKGLELVWKVLIPASIPSALTGVRLAWAFGWRALMAAELLGRG-------GLGRT 204

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           + ++ +  +   V+  ++I+    L +   +++P+     + 
Sbjct: 205 LLDARDFFNMELVIAIMIIIAVIGLIVEYLIFNPIERKVLQR 246


>gi|255349261|ref|ZP_05381268.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 70]
 gi|255503797|ref|ZP_05382187.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis 70s]
 gi|255507479|ref|ZP_05383118.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis D(s)2923]
 gi|289525901|emb|CBJ15383.1| ABC transporter permease [Chlamydia trachomatis Sweden2]
 gi|296435488|gb|ADH17666.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis E/150]
 gi|296439205|gb|ADH21358.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme
           [Chlamydia trachomatis E/11023]
          Length = 589

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P   ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPFCVLVQCLPMFTLAPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LTML +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILIVESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + PF  L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSTQGLLHPFCVLVQCLPMFTLAPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILIVESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|194292714|ref|YP_002008621.1| binding-protein-dependent transport systems inner membrane
           component, ABC transporter, permease protein
           [Cupriavidus taiwanensis LMG 19424]
 gi|193226618|emb|CAQ72569.1| putative Binding-protein-dependent transport systems inner membrane
           component, ABC transporter, permease protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 293

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 89/224 (39%), Gaps = 10/224 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
              +      +    LP  A+ +   +L      ++  FV  +LA  +R    +L  +  
Sbjct: 74  LATLRAFGAAVTSGELPGKAAISLSVLLRGYAAGIVLAFVLTSLAVSTRIGRDLLDTLTA 133

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F             + +F +  S +W +  +MY     +P  L
Sbjct: 134 MFNPLPAIALLPLALLWFGLGTG--------SLVFVLIHSVLWPLALNMYAGFRAVPPTL 185

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 186 RMAGRNYGLRGLRYVALVLVPAALPAILSGLKIGWAFAWRTLIAAELVFGASS--GQGGL 243

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           G +I     E     +   +  ++ +  L + L+F  +   + +
Sbjct: 244 GWFIFQNRNELYTDRVFAGLAAVILIGLLVEGLVFTTLERLTVR 287



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  ++I    W +  N+ AG  A P   +    ++ + G R+   +++P   P  ++G  
Sbjct: 158 LVFVLIHSVLWPLALNMYAGFRAVPPTLRMAGRNYGLRGLRYVALVLVPAALPAILSGLK 217

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG +I ++  +     V  G+  +    L +  
Sbjct: 218 IGWAFAWRTLIAAELVFGASS--GQGGLGWFIFQNRNELYTDRVFAGLAAVILIGLLVEG 275

Query: 572 FLWHPLYLYGTRC 584
            ++  L     R 
Sbjct: 276 LVFTTLERLTVRR 288


>gi|237653513|ref|YP_002889827.1| binding-protein-dependent transporters inner membrane component
           [Thauera sp. MZ1T]
 gi|237624760|gb|ACR01450.1| binding-protein-dependent transport systems inner membrane
           component [Thauera sp. MZ1T]
          Length = 285

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 15/253 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I  L+ FVL+  +   L    +    P  ++  +       +LP + + T  R+  A   
Sbjct: 47  IASLVVFVLLWQLGASLAD-SRTLPDPLAVLARIGAETASLALPGHLAVTLGRVAVAFAA 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++L   +      + R++   L   L +  +IP L  +    V+F           + AA
Sbjct: 106 AMLVGALVGMAMGRWRKVDAFLDAWLVLGLNIPALVTIILCYVWFGLN--------DWAA 157

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I A+  +++  +  ++ +    +   L EV+R++RL     F  + +P  +P L+     
Sbjct: 158 IVAVAINKIPTVIVTVREGARAVDPRLLEVARAYRLGRRTTFLRVYLPQLVPYLMAAARS 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  W  V+  E++          G+G  + +  +  D+  IL   L   GV+   +  
Sbjct: 218 GLSLIWKIVLVVELLG------RSEGVGFQLNVFFQFFDITGILAYTLVFAGVVLAAEGW 271

Query: 259 LFRPMIVWSNKFR 271
           + RP+      +R
Sbjct: 272 VLRPLERLLGAWR 284



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 83/243 (34%), Gaps = 23/243 (9%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVI-------------WLGCITMFRVVVLIIIA 397
           +   V   + WQ    + +  T  D L V+                 +T+ RV V    A
Sbjct: 47  IASLVVFVLLWQLGASLADSRTLPDPLAVLARIGAETASLALPGHLAVTLGRVAVAFAAA 106

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++   VG+ +G    + + +  +  L    PA V   L            +    + + 
Sbjct: 107 MLVGALVGMAMGRWRKVDAFLDAWLVLGLNIPALVTIILCYVWFGL----NDWAAIVAVA 162

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++  V  GA A      EVA ++ +     +  + LP + PY +  A +     
Sbjct: 163 INKIPTVIVTVREGARAVDPRLLEVARAYRLGRRTTFLRVYLPQLVPYLMAAARSGLSLI 222

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           W   +V E+        R+ G+G  +    +      ++   L+    VLA   ++  PL
Sbjct: 223 WKIVLVVELLG------RSEGVGFQLNVFFQFFDITGILAYTLVFAGVVLAAEGWVLRPL 276

Query: 578 YLY 580
              
Sbjct: 277 ERL 279


>gi|168184309|ref|ZP_02618973.1| putative ABC transporter, permease protein [Clostridium botulinum
           Bf]
 gi|237794723|ref|YP_002862275.1| putative ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182672593|gb|EDT84554.1| putative ABC transporter, permease protein [Clostridium botulinum
           Bf]
 gi|229260901|gb|ACQ51934.1| putative ABC transporter, permease protein [Clostridium botulinum
           Ba4 str. 657]
          Length = 253

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   REDKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLTVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P      + +  +   
Sbjct: 67  KSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWL--K 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N +++ S+LM F     I  NV+ G  +      E+A+ + +        I LP   P
Sbjct: 125 SSNVSIFTSILMCFPI---IYTNVLLGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 103/249 (41%), Gaps = 9/249 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M +  I       ++      ++ +V +  + ++ ++       P+ + + + I      
Sbjct: 1   MKISTIREDKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRY 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                 ++ +R++  ++IS++       +A  +  +  +L P++  +++ P++  +   +
Sbjct: 61  FWLTVFKSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIAL 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+  +            +IF         +  ++   + ++ + L E++  + +      
Sbjct: 121 VWLKSSN---------VSIFTSILMCFPIIYTNVLLGIKSVDKKLVEMANLYEVKNKYIL 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  ++M +  GW   VASE++      I L  + +   LA +E     
Sbjct: 172 INIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWT 231

Query: 241 ILYAMLTML 249
           I+  +L+++
Sbjct: 232 IVVVLLSLI 240


>gi|116662322|ref|YP_829376.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116613086|gb|ABK05795.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 266

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V +  +IA+ I  P+G  IG    + +   P      A P  +FFP+++      
Sbjct: 77  ATLQAVAIGFLIAAAIGFPLGYAIGRSKFLGAVFDPIVAGAFAIPRVIFFPILLQIFGVG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +   +L  +F     I+ +  AG  A      ++A S  ++  +    I +P + P
Sbjct: 137 VGAQSAMAALAAVF----PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       A+   I++E  +         GLG     +      P +   ++++  
Sbjct: 193 SLMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAA 246

Query: 565 FVLALNRFLW 574
             LA N  LW
Sbjct: 247 IALAGNLALW 256



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 14/249 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           SR I  N++     V ++ +  +L         P D ++ +       S+ ++ + T   
Sbjct: 22  SRVIRDNVWRAAVLVALVLLWALLSSISDLVASPTDSLNALAKRFADGSIYRHLNATLQA 81

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    +I+    F       +S+ LG V  PI+    +IP + F    +  F      + 
Sbjct: 82  VAIGFLIAAAIGFPLGYAIGRSKFLGAVFDPIVAGAFAIPRVIFFPILLQIFGVGVGAQS 141

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A LAA+F         +  S    +  I   L +++RS  LS  Q    + +P   P 
Sbjct: 142 AMAALAAVF--------PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAPS 193

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + +  S  +  V+ +E            G+G     A    DL  +   ++ +  +
Sbjct: 194 LMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAAI 247

Query: 252 IFLYDQLLF 260
               +  L+
Sbjct: 248 ALAGNLALW 256


>gi|166030644|ref|ZP_02233473.1| hypothetical protein DORFOR_00310 [Dorea formicigenerans ATCC
           27755]
 gi|166029646|gb|EDR48403.1| hypothetical protein DORFOR_00310 [Dorea formicigenerans ATCC
           27755]
          Length = 253

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V +   +++  +      +   ++  IIIA +I I  G  +G    I   + P    ++ 
Sbjct: 45  VANSFKENIGTLFMNMFYSFQLMIPAIIIAVVIAIVGGTILGMSKKIRKVVHPVVYSISV 104

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+ +  P  +     +     +    L+++ T W   F  I G       + + A +  
Sbjct: 105 IPSILMSPFALLMAPSFR----IASLFLVVYNTIWATFFATINGIMTIDKVYLDKAKTLE 160

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +        +ILP   P  ++G IT+  G++   + +E+      +    G+G Y+ +  
Sbjct: 161 LNPVEKMFQVILPAAMPSIMSGFITSLRGSFVVLVYAEM------YGAKFGMGFYVKKFA 214

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
           E G + E   G + M   ++ + +  
Sbjct: 215 EYGLYSEAWSGFIFMVVVLVIVMQIF 240



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 93/214 (43%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ +L      +   M+ A++I+++   V  T+   S+++  V+ P++  +  IP +   
Sbjct: 52  NIGTLFMNMFYSFQLMIPAIIIAVVIAIVGGTILGMSKKIRKVVHPVVYSISVIPSILMS 111

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F ++              +A++F +  + +W   F+    +  I +   + +++  L+ 
Sbjct: 112 PFALL--------MAPSFRIASLFLVVYNTIWATFFATINGIMTIDKVYLDKAKTLELNP 163

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +K + + +P +MP ++   + S+ G +  +V +EM           G+G Y+    +  
Sbjct: 164 VEKMFQVILPAAMPSIMSGFITSLRGSFVVLVYAEMYG------AKFGMGFYVKKFAEYG 217

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
                    + M+ V+ +  Q+  +    ++ W+
Sbjct: 218 LYSEAWSGFIFMVVVLVIVMQIFEKMKNRILRWT 251


>gi|47565638|ref|ZP_00236678.1| MW0685 [Bacillus cereus G9241]
 gi|47557274|gb|EAL15602.1| MW0685 [Bacillus cereus G9241]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|229074935|ref|ZP_04207942.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock4-18]
 gi|229102879|ref|ZP_04233573.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-28]
 gi|229115760|ref|ZP_04245162.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock1-3]
 gi|228667643|gb|EEL23083.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock1-3]
 gi|228680552|gb|EEL34735.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-28]
 gi|228708163|gb|EEL60329.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock4-18]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|291521826|emb|CBK80119.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Coprococcus catus GD/7]
          Length = 263

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 101/254 (39%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  L+  +++  +++I+    +       ++  +   +    L +    + + +L   +I
Sbjct: 21  LISLVVALILWTVLSIIPSTSRCFPNAIKVIGSIQTMVSRGLLFKDIGSSLISVLLGFLI 80

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +     A L A  R +  ++ P +  +++IP L ++   V+        +VI      
Sbjct: 81  GFVTAVPVAFLMAWYRPVRFIIEPWIQFIRNIPPLAYVPLVVIGVGVGRTPQVI------ 134

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I+ +    MT +++Q + N+   L + +R         F  +  P + P ++  + +
Sbjct: 135 --VIWLATFLTMTVTIFQGVINVDETLIKAARVLGAKDSDLFVKVIFPATTPFIITAIRL 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S     ++A+E      +   + G+G  I       +   +L  ++ +  +  L +++
Sbjct: 193 GISTALTTLIAAE------STGAVAGLGMRIKALSNSYETTPMLLYIIIIGIIGMLAEKI 246

Query: 259 L---FRPMIVWSNK 269
           L    R +  W  K
Sbjct: 247 LKYFERKLTGWQEK 260



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 67/209 (32%), Gaps = 13/209 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++  V++  +I  +  +PV   + +   +   I+P+ Q +   P   + PLVV
Sbjct: 63  LFKDIGSSLISVLLGFLIGFVTAVPVAFLMAWYRPVRFIIEPWIQFIRNIPPLAYVPLVV 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V            +++   T   +   +  G         + A          +  +I
Sbjct: 123 IGVGVGRTPQ----VIVIWLATFLTMTVTIFQGVINVDETLIKAARVLGAKDSDLFVKVI 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P+ +T        A    I +E            GLG  I   +       ++L 
Sbjct: 179 FPATTPFIITAIRLGISTALTTLIAAE------STGAVAGLGMRIKALSNSYETTPMLLY 232

Query: 559 VLIMCCFVLALNRFLW---HPLYLYGTRC 584
           ++I+    +   + L      L  +  + 
Sbjct: 233 IIIIGIIGMLAEKILKYFERKLTGWQEKR 261


>gi|229096778|ref|ZP_04227748.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-29]
 gi|228686620|gb|EEL40528.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-29]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|218903422|ref|YP_002451256.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH820]
 gi|228933588|ref|ZP_04096438.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|218538433|gb|ACK90831.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH820]
 gi|228826048|gb|EEM71831.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|118477707|ref|YP_894858.1| glycine betaine/choline ABC transporter ATP-binding protein
           [Bacillus thuringiensis str. Al Hakam]
 gi|225864258|ref|YP_002749636.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus 03BB102]
 gi|229184508|ref|ZP_04311711.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus BGSC
           6E1]
 gi|118416932|gb|ABK85351.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus thuringiensis str. Al Hakam]
 gi|225789951|gb|ACO30168.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus 03BB102]
 gi|228598919|gb|EEK56536.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus BGSC
           6E1]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|229196508|ref|ZP_04323252.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           m1293]
 gi|228586864|gb|EEK44938.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           m1293]
          Length = 505

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|259046958|ref|ZP_05737359.1| choline transporter [Granulicatella adiacens ATCC 49175]
 gi|259036401|gb|EEW37656.1| choline transporter [Granulicatella adiacens ATCC 49175]
          Length = 505

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 71/176 (40%), Gaps = 15/176 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L +  +R    ++ +  I Q+IP L  L   + +             + A+  + 
Sbjct: 38  VPLAVLLSSRKRAAGFVLQVAGIFQTIPSLALLGLFIPFMGIG--------TVPALTTLV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +    L  I   LEE + +F ++ W++     +P +MP ++  +  S    
Sbjct: 90  IYALFPILQNTITGLQGIDPSLEEAAVAFGMTKWERLKKFEIPIAMPVIMSGIRTSA--- 146

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             F++ +  +     +I   G+GS+I L I   +   I+   ++   +   +  LL
Sbjct: 147 -VFIIGTATLAA---LIGAGGLGSFILLGIDRNNASLIIIGAVSSAVLAIAFSTLL 198



 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 68/172 (39%), Gaps = 11/172 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+ + +  R   +  +   A +    P+     L +  +    +     L+ L+I+   
Sbjct: 38  VPLAVLLSSRKRAAGFVLQVAGIFQTIPSLALLGLFIPFMGIGTVP---ALTTLVIY-AL 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL N I G        +E A +F +T W   +   +P   P  ++G  T+       +
Sbjct: 94  FPILQNTITGLQGIDPSLEEAAVAFGMTKWERLKKFEIPIAMPVIMSGIRTSAVFIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +   G       GLG++I    ++ +   +++G +      +A +  L
Sbjct: 154 TLAALIGAG-------GLGSFILLGIDRNNASLIIIGAVSSAVLAIAFSTLL 198


>gi|229155868|ref|ZP_04283969.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus ATCC
           4342]
 gi|228627475|gb|EEK84201.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus ATCC
           4342]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|30262289|ref|NP_844666.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Bacillus anthracis str. Ames]
 gi|47527581|ref|YP_018930.1| glycine betaine/L-proline ABC transporter permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185136|ref|YP_028388.1| glycine betaine/L-proline ABC transporter permease [Bacillus
           anthracis str. Sterne]
 gi|65319586|ref|ZP_00392545.1| COG1732: Periplasmic glycine betaine/choline-binding (lipo)protein
           of an ABC-type transport system (osmoprotectant binding
           protein) [Bacillus anthracis str. A2012]
 gi|165870546|ref|ZP_02215200.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0488]
 gi|167639675|ref|ZP_02397945.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0193]
 gi|170686955|ref|ZP_02878174.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0465]
 gi|170706709|ref|ZP_02897168.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0389]
 gi|177649503|ref|ZP_02932505.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0174]
 gi|190565250|ref|ZP_03018170.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227814902|ref|YP_002814911.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str. CDC
           684]
 gi|229600162|ref|YP_002866626.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0248]
 gi|254684863|ref|ZP_05148723.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254722271|ref|ZP_05184059.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A1055]
 gi|254737310|ref|ZP_05195014.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254751626|ref|ZP_05203663.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           Vollum]
 gi|254760145|ref|ZP_05212169.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           Australia 94]
 gi|30256920|gb|AAP26152.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str. Ames]
 gi|47502729|gb|AAT31405.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49179063|gb|AAT54439.1| glycine betaine/L-proline ABC transporter, permease protein,
           putative [Bacillus anthracis str. Sterne]
 gi|164713701|gb|EDR19224.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0488]
 gi|167512384|gb|EDR87760.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0193]
 gi|170128440|gb|EDS97308.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0389]
 gi|170669006|gb|EDT19750.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0465]
 gi|172084577|gb|EDT69635.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0174]
 gi|190563277|gb|EDV17242.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227004491|gb|ACP14234.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str. CDC
           684]
 gi|229264570|gb|ACQ46207.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0248]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|89098817|ref|ZP_01171698.1| probable glycine betaine/carnitine/choline ABC transporter
           [Bacillus sp. NRRL B-14911]
 gi|89086493|gb|EAR65613.1| probable glycine betaine/carnitine/choline ABC transporter
           [Bacillus sp. NRRL B-14911]
          Length = 517

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              + +   +     + ++VI+   +       ++ ++L   ++ +  I Q+IP L    
Sbjct: 17  WPEILEALQQHLFLSVVSIVIAAAISLPLGIFISRRKKLAEPIIGVTSIFQTIPSLALFG 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +  F            + AI A+    +  +  + Y  +  + +   E  R   ++  
Sbjct: 77  FLLPLFGIGN--------VTAIIALTVYALLPLLRNTYTGINGVDQSAVEAGRGMGMTSN 128

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++P ++  +  +          +  I  G       G+G  I   +    
Sbjct: 129 QILRMIELPLALPIIMAGLRTAAVLTIGVATLAAFIGAG-------GLGDLIYRGLSTAR 181

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIV 265
              +L   +    +  + D +L R  I 
Sbjct: 182 NELVLAGAIPAAVLAIVIDLILKRIEIA 209



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 14/203 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++L  +      +F  VV I+IA+ I +P+GI+I  R  ++  I     +    P+  
Sbjct: 17  WPEILEALQQH---LFLSVVSIVIAAAISLPLGIFISRRKKLAEPIIGVTSIFQTIPSLA 73

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F  ++      ++   + L++  +      +L N   G +       E      +T  +
Sbjct: 74  LFGFLLPLFGIGNVTAIIALTVYALL----PLLRNTYTGINGVDQSAVEAGRGMGMTSNQ 129

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I LP   P  + G  TA       + ++     G       GLG  I         
Sbjct: 130 ILRMIELPLALPIIMAGLRTAAVLTIGVATLAAFIGAG-------GLGDLIYRGLSTARN 182

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
             V+ G +      + ++  L  
Sbjct: 183 ELVLAGAIPAAVLAIVIDLILKR 205


>gi|284047041|ref|YP_003397381.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283951262|gb|ADB54006.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 263

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +    V+ + +A ++ I VG+ +G    +   + P    + A P   + PL V    + 
Sbjct: 68  ASFTAYVLGLGLAIVVGIVVGLLLGSFIPVDKLVGPVLWAVYAVPWLAYRPLSVVWFGFG 127

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  L      + I+ N  AGA      F      F +     +R I++P   P
Sbjct: 128 RG----PVIFLAFVAAVFPIIINTAAGARTVSPSFLNAGRVFGMRTPAIFRKIVIPSTLP 183

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +   G   +   A    +V+E+           G+GA I+ ST           + +   
Sbjct: 184 FIFVGVRQSAILAALGVLVAEL------TGSAEGVGALISLSTNSFQTERAFAAIAMAIV 237

Query: 565 FVLALNRFL 573
           ++  +   L
Sbjct: 238 WMFFVGELL 246



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 18/234 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           I +  + L        P +I+      ++   L      +    +  + ++++   V   
Sbjct: 30  IAVAELDLVNPVFLPAPTEILVGFKELVESGDLWTNVQASFTAYVLGLGLAIVVGIVVGL 89

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L      +  ++ P+L  + ++P L +   +VV+F               IF  F + V+
Sbjct: 90  LLGSFIPVDKLVGPVLWAVYAVPWLAYRPLSVVWFGFGRGP--------VIFLAFVAAVF 141

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +       +        R F +     F  + +P ++P +   +  S       ++
Sbjct: 142 PIIINTAAGARTVSPSFLNAGRVFGMRTPAIFRKIVIPSTLPFIFVGVRQS------AIL 195

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIK----EQDLLAILYAMLTMLGVIFLYDQL 258
           A+  ++V +      G+G+ I+L+      E+   AI  A++ M  V  L   L
Sbjct: 196 AALGVLVAELTGSAEGVGALISLSTNSFQTERAFAAIAMAIVWMFFVGELLKHL 249


>gi|91200378|emb|CAJ73424.1| similar to membrane protein component of ABC transporter for
           proline or glycine betaine [Candidatus Kuenenia
           stuttgartiensis]
          Length = 505

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 15/201 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
              +  L +  +     +  ++  ++L +     ++AK   LG +++ I+ ++Q+IP L 
Sbjct: 298 ETAISRLLRLTTEHLYLVTISLSAAILTSIPLGIVSAKRTTLGQIILAIVGVLQTIPSLA 357

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L F +       P         AI A+F   +  +  + Y  L +IP  ++E + +  L
Sbjct: 358 LLVFMIPLLGIGGPP--------AITALFLYSLLPIVRNTYTGLHDIPSHIQESAEALGL 409

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
               +   + +P +   ++  +  S       V+      +G  +I   G G  I   I+
Sbjct: 410 PPGARLRLVELPMASRPILAGIKTS------AVINVGTATLG-ALIGAGGYGQLILTGIR 462

Query: 235 EQDLLAILYAMLTMLGVIFLY 255
             ++  IL   +    +  + 
Sbjct: 463 LDNISLILQGAVPAAVLALIV 483



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 6/213 (2%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +S+      +    +  ++ L    ++ V + +  A +  IP+GI    R  +   I   
Sbjct: 287 ESLSLETESYEETAISRLLRLTTEHLYLVTISLSAAILTSIPLGIVSAKRTTLGQIILAI 346

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             +L   P+      ++  +      P +    L    +   I+ N   G    P+  +E
Sbjct: 347 VGVLQTIPSLALLVFMIPLLGIGG-PPAITALFLY---SLLPIVRNTYTGLHDIPSHIQE 402

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA-SWGHIHLRTTGLG 540
            A +  +      R + LP      + G  T+       + +  +  + G+  L  TG+ 
Sbjct: 403 SAEALGLPPGARLRLVELPMASRPILAGIKTSAVINVGTATLGALIGAGGYGQLILTGIR 462

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   +G+ P  VL +++   F  AL RF 
Sbjct: 463 LDNISLILQGAVPAAVLALIVQGGF-EALERFF 494


>gi|49477588|ref|YP_036392.1| glycine betaine/choline ABC transporter ATP-binding protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|196033823|ref|ZP_03101234.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus W]
 gi|228927351|ref|ZP_04090408.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228945902|ref|ZP_04108245.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229091272|ref|ZP_04222490.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-42]
 gi|229121836|ref|ZP_04251056.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           95/8201]
 gi|49329144|gb|AAT59790.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|195993503|gb|EDX57460.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus W]
 gi|228661625|gb|EEL17245.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           95/8201]
 gi|228692038|gb|EEL45779.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-42]
 gi|228813776|gb|EEM60054.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228832247|gb|EEM77827.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|52143178|ref|YP_083652.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus cereus E33L]
 gi|51976647|gb|AAU18197.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus cereus E33L]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|254820641|ref|ZP_05225642.1| putative ABC transporter transmembrane subunit [Mycobacterium
           intracellulare ATCC 13950]
          Length = 263

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 7/190 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ITM R +    +A +I   VG  I     + +   P    L   PA  +FP  +     
Sbjct: 62  GITMCRALAGFALALLIGSVVGAVIAQNRLLRTAFGPVITGLQTMPAIAWFPFAIIFFGL 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +       +  +++ G    +   V+AGA   P     VA +  + G+  +R++ILP   
Sbjct: 122 H----TSAILFVVVIGAAPSVATGVLAGAGQIPPLQLRVAKNLGLHGFGLYRHVILPASL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +V G       AW + +  E+            +G  +  S      P  +  ++++ 
Sbjct: 178 PMFVAGLRQGWAFAWRSLMAGELVVLISDTAS---IGVLLENSQNLSDMPSAIAIMIVIL 234

Query: 564 CFVLALNRFL 573
              +A++   
Sbjct: 235 LIGIAIDAVF 244



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 94/239 (39%), Gaps = 12/239 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +F +   +L+  ++ +           P  +   +   L    L      T  R L+   
Sbjct: 14  VFAVAMVLLIWQLVYLSGWKPSFVLPGPGTVAANLWQRLHEAVLWDAIGITMCRALAGFA 73

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++LL   V   + A++R L     P++  +Q++P + +  F +++F             A
Sbjct: 74  LALLIGSVVGAVIAQNRLLRTAFGPVITGLQTMPAIAWFPFAIIFFGL--------HTSA 125

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F +      ++   +      IP     V+++  L G+  + ++ +P S+P  V  + 
Sbjct: 126 ILFVVVIGAAPSVATGVLAGAGQIPPLQLRVAKNLGLHGFGLYRHVILPASLPMFVAGLR 185

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              +  W  ++A E++V+         IG  +  +    D+ + +  M+ +L +    D
Sbjct: 186 QGWAFAWRSLMAGELVVLISDTAS---IGVLLENSQNLSDMPSAIAIMIVILLIGIAID 241


>gi|27381565|ref|NP_773094.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354733|dbj|BAC51719.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 340

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI------VNHFTYQDVLYVIWLGCITMFRV 390
           ++R  +++ +  F  +  VA                 +      D+  ++     ++   
Sbjct: 91  HKRAPWLVALGAFLTLWEVATAKFAWLPLPFFPPPQSIIEVYTDDLPKLLDSVFASVKLQ 150

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +I + I    G+ IG+   +   + P  + +   PA  + P+          +   
Sbjct: 151 LGGYLIGATIGFLTGVSIGWSRAVGYWVHPVLRFIGPLPATAWLPIAFFTFP----SSWS 206

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             + L+   T + +     +G ++  N + +VA +           + +P   P+   G 
Sbjct: 207 ASTFLIALATGFPVTVLTWSGVASVSNAYYDVARTLGAKPSFLVLKVAIPAALPHVFVGL 266

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
               G ++   +V+E+           GLG Y+  +    ++  +   +++M   
Sbjct: 267 FMGLGSSFAVLVVAEMIG------VKAGLGWYLQWAQGWAAYANMYAALIVMSLL 315



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 87/248 (35%), Gaps = 14/248 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
            +  P +  L AF+ +  +       +     P     I   T D+  L      +    
Sbjct: 91  HKRAPWLVALGAFLTLWEVATAKFAWLPLPFFPPPQSIIEVYTDDLPKLLDSVFASVKLQ 150

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   +I     F+       SR +G  + P+L  +  +P   +L      F         
Sbjct: 151 LGGYLIGATIGFLTGVSIGWSRAVGYWVHPVLRFIGPLPATAWLPIAFFTF--------P 202

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +  A+ F I  +  + +T   +  + ++     +V+R+           + +P ++P +
Sbjct: 203 SSWSASTFLIALATGFPVTVLTWSGVASVSNAYYDVARTLGAKPSFLVLKVAIPAALPHV 262

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M +   +  +V +EMI V        G+G Y+  A        +  A++ M  + 
Sbjct: 263 FVGLFMGLGSSFAVLVVAEMIGVKA------GLGWYLQWAQGWAAYANMYAALIVMSLLC 316

Query: 253 FLYDQLLF 260
                LLF
Sbjct: 317 SGAITLLF 324


>gi|307710729|ref|ZP_07647158.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus mitis SK321]
 gi|307617500|gb|EFN96671.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Streptococcus mitis SK321]
          Length = 506

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|163856869|ref|YP_001631167.1| inner membrane component of binding-protein-dependent transport
           system [Bordetella petrii DSM 12804]
 gi|163260597|emb|CAP42899.1| probable inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 257

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 14/251 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    +  +    L+       L       VP  +  +V   L   S  Q    T  R+
Sbjct: 11  RKHLAGVLGVAFIFLLWQAAAWALPDFLMPGVPTVVGRLVR-DLGEASFHQSLVGTLGRL 69

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +   ++LL    +  +AA       VL   + I+QSIP + ++   ++           
Sbjct: 70  GAGYGLALLAGIGFGLVAAVLYFFREVLRSAIVILQSIPSIAWVPLFLIVMG-------- 121

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +  +  +    S+  +  ++ R     +R    + W     + +P  MP L
Sbjct: 122 FGNTPIIVVVALAAFFPAALSVMNATESVQRVHVSAARVMGATPWGLIKRVYLPAVMPEL 181

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    ++    W  ++++EM++         G+G  +A + +  D+  ++  +L +  + 
Sbjct: 182 ITGAQLAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMANILVIAILA 236

Query: 253 FLYDQLLFRPM 263
            L DQ +   +
Sbjct: 237 ALIDQFVLENL 247



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 17/246 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------TMFRVV 391
             ++  +     +  +    AW    +++          V  LG          T+ R+ 
Sbjct: 11  RKHLAGVLGVAFIFLLWQAAAWALPDFLMPGVPTVVGRLVRDLGEASFHQSLVGTLGRLG 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A +  I  G+           ++    +L + P+  + PL +  + +     N  
Sbjct: 71  AGYGLALLAGIGFGLVAAVLYFFREVLRSAIVILQSIPSIAWVPLFLIVMGFG----NTP 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + +++     +    +V+    +        A     T W   + + LP + P  +TGA 
Sbjct: 127 IIVVVALAAFFPAALSVMNATESVQRVHVSAARVMGATPWGLIKRVYLPAVMPELITGAQ 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A G AW A I +E+           GLG  +A S E      V+  +L++      +++
Sbjct: 187 LAFGNAWRALISAEMLIGFGK-----GLGRSLAYSGEIADMTGVMANILVIAILAALIDQ 241

Query: 572 FLWHPL 577
           F+   L
Sbjct: 242 FVLENL 247


>gi|323528700|ref|YP_004230852.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323385702|gb|ADX57792.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 317

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 92/241 (38%), Gaps = 16/241 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++   + F + + +  ++       ++      +  + + V  +   A  T   + +A++
Sbjct: 47  DVLHAVPFPIFVVVCALIAWRFAGRSIA-AFTFVGLVVIAVLGVWSDAMTTLALISTAIL 105

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
              +         A+S R+  ++ PILDIMQ+ P   +L   V+ F     G V G    
Sbjct: 106 FCAVAGIPIGVACARSDRVWRIVRPILDIMQTTPTFVYLVPVVMLFGV---GTVPGE--- 159

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
              A+ T+ +  +       +  +  +L E   +F     Q  W + +P ++P ++  + 
Sbjct: 160 --VAVVTAALPPLIRFTNLGIRMVEHELVEAGLAFGADRRQLLWEVQLPLAVPTILGGLN 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++       V   MI          G+G  +   +   D+       + ++ +  + D+
Sbjct: 218 QTVLTAMVMSVVVSMI-------GAEGLGLVVLQGLGRLDVGQAAIGGIAIVLLAMMLDR 270

Query: 258 L 258
           +
Sbjct: 271 I 271



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 81/235 (34%), Gaps = 16/235 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIA 397
           +L    F +   V   IAW+  G  +  FT+  ++ +  LG       T+  +   I+  
Sbjct: 48  VLHAVPFPIFVVVCALIAWRFAGRSIAAFTFVGLVVIAVLGVWSDAMTTLALISTAILFC 107

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           ++  IP+G+       +   ++P   ++   P  V+   VV       +   +     ++
Sbjct: 108 AVAGIPIGVACARSDRVWRIVRPILDIMQTTPTFVYLVPVVMLFGVGTVPGEVA----VV 163

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++     G     ++  E   +F     +    + LP   P  + G       A
Sbjct: 164 TAALPPLIRFTNLGIRMVEHELVEAGLAFGADRRQLLWEVQLPLAVPTILGGLNQTVLTA 223

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              S+V  +           GLG  + +   +    +  +G + +    + L+R 
Sbjct: 224 MVMSVVVSMIG-------AEGLGLVVLQGLGRLDVGQAAIGGIAIVLLAMMLDRI 271


>gi|212696466|ref|ZP_03304594.1| hypothetical protein ANHYDRO_01004 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676559|gb|EEB36166.1| hypothetical protein ANHYDRO_01004 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 504

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A   +  ++L   ++ I  + Q+IP L  L   + +            ++ AI A+
Sbjct: 38  AVPLAIFLSHRKKLNEWILQITGVFQTIPSLALLGLFIPFMGIG--------KVPAITAL 89

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               ++ +  +       I   LEE + +F ++ W+K     +  +MP ++  +  S   
Sbjct: 90  VIYALFPIYQATITGFSEIDPSLEEAATAFGMTRWEKLKKYKLSLAMPIIMSGVRTSA-- 147

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               ++ +  +     ++   G+GS+I L I   D   IL   ++   +  L+  L+
Sbjct: 148 --IMIIGTATLAA---LVGAGGLGSFILLGIDRNDSALILIGAISSALLAILFGSLI 199



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 11/173 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+ I++  R  ++  I     +    P+     L +  +        +     ++   
Sbjct: 38  AVPLAIFLSHRKKLNEWILQITGVFQTIPSLALLGLFIPFMGIG----KVPAITALVIYA 93

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I    I G S      +E A++F +T W   +   L    P  ++G  T+       
Sbjct: 94  LFPIYQATITGFSEIDPSLEEAATAFGMTRWEKLKKYKLSLAMPIIMSGVRTSAIMIIGT 153

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + ++ +   G       GLG++I    ++     +++G +      +     +
Sbjct: 154 ATLAALVGAG-------GLGSFILLGIDRNDSALILIGAISSALLAILFGSLI 199


>gi|269837482|ref|YP_003319710.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
 gi|269786745|gb|ACZ38888.1| binding-protein-dependent transport systems inner membrane
           component [Sphaerobacter thermophilus DSM 20745]
          Length = 295

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+ +     L    L +YA  T +  L+   +            A+SR L   L 
Sbjct: 80  LPAPGDVAETFARALRSGLLWRYARVTLVESLAGFALGTAVALPTGYAIARSRLLSRALE 139

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L   Q++P +      V++         +   L   F         M  +    L  +
Sbjct: 140 PYLAASQALPAIALAPLLVIWLGYGLRAVAVLCALIVFF--------PMVVNTALGLRTL 191

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  + +R      W   W++ +P ++P ++  M   ++      V  E ++    +  
Sbjct: 192 DPEPVDAARVDGADRWSLLWHIELPLALPSILAGMRTGLTLSITGAVVGEFVLGDRGLGG 251

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           L        +A    D   + +A L ML ++      + R +  W
Sbjct: 252 LL------IIARGNFDTPLV-FATLLMLVMLAAAMYGIARLVERW 289



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 11/265 (4%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            +P+   V++  +     R         L +       L ++      G        + G
Sbjct: 25  VAPIRVPVERERKRSSPARGIPQRAARWLPALVLGLLALVLWEALSRSGTVSSFLLPAPG 84

Query: 366 YIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            +   F       ++W    +T+   +    + + + +P G  I     +S  ++P+   
Sbjct: 85  DVAETFARALRSGLLWRYARVTLVESLAGFALGTAVALPTGYAIARSRLLSRALEPYLAA 144

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
             A PA    PL+V  + Y      +  +L++ F     ++ N   G      +  + A 
Sbjct: 145 SQALPAIALAPLLVIWLGYGLRAVAVLCALIVFF----PMVVNTALGLRTLDPEPVDAAR 200

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
                 W    +I LP   P  + G  T    +   ++V E             +     
Sbjct: 201 VDGADRWSLLWHIELPLALPSILAGMRTGLTLSITGAVVGEFVLGDRGLGGLLII----- 255

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLAL 569
            +      P V   +L++     A+
Sbjct: 256 -ARGNFDTPLVFATLLMLVMLAAAM 279


>gi|325846724|ref|ZP_08169639.1| ABC transporter, substrate-binding protein, QAT family
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481482|gb|EGC84523.1| ABC transporter, substrate-binding protein, QAT family
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 503

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A   +  ++L   ++ I  + Q+IP L  L   + +            ++ AI A+
Sbjct: 37  AVPLAIFLSHRKKLNEWVLQITGVFQTIPSLALLGLFIPFMGIG--------KVPAITAL 88

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               ++ +  +       I   LEE + +F ++ W+K     +  +MP ++  +  S   
Sbjct: 89  VIYALFPIYQATITGFSEIDPSLEEAATAFGMTRWEKLKKYKLSLAMPIIMSGIRTSA-- 146

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               ++ +  +     ++   G+GS+I L I   D   IL   ++   +  L+  L+
Sbjct: 147 --IMIIGTATLAA---LVGAGGLGSFILLGIDRNDSALILIGAISSALLAILFGSLI 198



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 61/173 (35%), Gaps = 11/173 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+ I++  R  ++  +     +    P+     L +  +        +     ++   
Sbjct: 37  AVPLAIFLSHRKKLNEWVLQITGVFQTIPSLALLGLFIPFMGIG----KVPAITALVIYA 92

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I    I G S      +E A++F +T W   +   L    P  ++G  T+       
Sbjct: 93  LFPIYQATITGFSEIDPSLEEAATAFGMTRWEKLKKYKLSLAMPIIMSGIRTSAIMIIGT 152

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + ++ +   G       GLG++I    ++     +++G +      +     +
Sbjct: 153 ATLAALVGAG-------GLGSFILLGIDRNDSALILIGAISSALLAILFGSLI 198


>gi|307707562|ref|ZP_07644044.1| choline transporter [Streptococcus mitis NCTC 12261]
 gi|307616514|gb|EFN95705.1| choline transporter [Streptococcus mitis NCTC 12261]
          Length = 506

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFIAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|229173571|ref|ZP_04301114.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus MM3]
 gi|228609953|gb|EEK67232.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus MM3]
          Length = 282

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 391 VVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   +  S+     G +IG            F       + P  Q+L   P     PL V
Sbjct: 78  LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFV 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   +      LL+  G  + +  N   G     +   +VA     +  +    +I
Sbjct: 138 LWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLI 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + GA  + G AW + +V+E+         T G+G  I ++ +  +   V +G
Sbjct: 194 LPAALPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVG 247

Query: 559 VLIMCCFVLALNRFL 573
           ++I        +  +
Sbjct: 248 IIIFAFVGKFSDSLV 262


>gi|156742360|ref|YP_001432489.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156233688|gb|ABU58471.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 275

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 14/209 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   L   +LP++ + T    LS   I+L  +       A+ R     L 
Sbjct: 60  LPAPTLVFQRLATELAGETLPRHIAVTMSAALSGFGIALAISLSLGYALAQVRAFDRALT 119

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L   Q++PI+      V++       +V+ A L   F I ++ +         +  ++
Sbjct: 120 PLLAASQAVPIVAVAPLIVLWVGVGLESRVLVATLVTFFPILSATI--------VAFRSV 171

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR+L +++R    + W     + +P ++PG+   +   ++       A+   VVG+ V  
Sbjct: 172 PRELIDMARISGANRWHLLRSVELPLALPGIFGGVKAGLAL------ATTGAVVGEFVGG 225

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             G+G+ I +A    D   +  A+  + G
Sbjct: 226 RDGLGALINIARGLFDTPLMFVALTVLAG 254



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 10/256 (3%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           PL ++           R+          +   ++ ++       V      I        
Sbjct: 8   PLRSDRAIPLYRGAARRWSLRIPVWLNLTLALIALLIGWQALVTVRNYPPFILPAPTLVF 67

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
               T      +     +TM   +    IA  I + +G  +         + P      A
Sbjct: 68  QRLATELAGETLPRHIAVTMSAALSGFGIALAISLSLGYALAQVRAFDRALTPLLAASQA 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V  V     +  L  +L+    T + IL   I    + P +  ++A    
Sbjct: 128 VPIVAVAPLIVLWVGVGLESRVLVATLV----TFFPILSATIVAFRSVPRELIDMARISG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              W   R + LP   P    G       A   ++V E            GLGA I  + 
Sbjct: 184 ANRWHLLRSVELPLALPGIFGGVKAGLALATTGAVVGEFVGGRD------GLGALINIAR 237

Query: 548 EKGSFPEVVLGVLIMC 563
                P + + + ++ 
Sbjct: 238 GLFDTPLMFVALTVLA 253


>gi|116618119|ref|YP_818490.1| ABC-type proline/glycine betaine transport systems, permease and
           substrate binding protein [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096966|gb|ABJ62117.1| ABC-type proline/glycine betaine transport systems, permease and
           substrate binding protein [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 508

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 14/185 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+L  +W     +   +  ++IA +I IP+ IW+  RP  +  +     +L   P+   
Sbjct: 13  GDLLTALWQH---LGISLASLVIAMVIAIPLAIWVVRRPRCAEGLLQLTSVLQTIPSLAL 69

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L++  V    +   + L +  +      I  N   G S      +E A +F ++  R 
Sbjct: 70  LGLLIPLVGIGTVPAVIALVIYALL----PIFQNTYLGISEIDASIEETADAFGMSRMRK 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  ++G  TA       + ++ +   G       GLG +I    ++    
Sbjct: 126 LFKVELPIALPQIISGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDTS 178

Query: 554 EVVLG 558
            +++G
Sbjct: 179 LLLIG 183



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++VI+++     A    +  R    L+ +  ++Q+IP       
Sbjct: 13  GDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRCAEGLLQLTSVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    + A+ A+    +  +  + Y  +  I   +EE + +F +S  +
Sbjct: 67  --LALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEETADAFGMSRMR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           K + + +P ++P ++  +  ++         + +I  G       G+G++I L I   D 
Sbjct: 125 KLFKVELPIALPQIISGIRTALVLIIGTATLAALIGAG-------GLGTFIMLGIDRNDT 177

Query: 239 LAILYA 244
             +L  
Sbjct: 178 SLLLIG 183


>gi|78777545|ref|YP_393860.1| binding-protein dependent transport system inner membrane protein
           [Sulfurimonas denitrificans DSM 1251]
 gi|78498085|gb|ABB44625.1| Binding-protein-dependent transport systems inner membrane
           component [Sulfurimonas denitrificans DSM 1251]
          Length = 260

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 94/249 (37%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   + +  +   ++G      P +    +   L+  S+      T  R      ISLLF
Sbjct: 25  ILLFIALWDMGNQVYGDLVLPSPLETFKTLHAMLNDDSVIAEIKTTLYRSSVGFGISLLF 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LA       M+  PI+ I+  +P + ++   +++F           +   IF +
Sbjct: 85  GTALGLLAGFFATASMMSRPIVTILVGMPPIAWIVLAMIWFGMG--------DETVIFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +     Q    +  DL+E+++SF      KF  +  P     +    + ++  
Sbjct: 137 IVASFPIIFVGALQGTRTLDGDLKEMAKSFNFPWHMKFLDVYFPHIFSYVFPAWVSALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  V+ +E++   D      GIG+ +A A  + D    L  +  M+G +   + ++  P
Sbjct: 197 AWKIVIMAELLATSD------GIGASLATARSQLDTPTALAIVSIMIGSLMFIEYIILEP 250

Query: 263 MIVWSNKFR 271
           +      +R
Sbjct: 251 IKREVELWR 259



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 10/251 (3%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
           FP              +    W          +    +          +   VI     T
Sbjct: 11  FPAFLWSGWGAISSILLFIALWDMGNQVYGDLVLPSPLETFKTLHAMLNDDSVIAEIKTT 70

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++R  V   I+ +    +G+  GF    S   +P   +L   P   +  L +        
Sbjct: 71  LYRSSVGFGISLLFGTALGLLAGFFATASMMSRPIVTILVGMPPIAWIVLAMIWFGMG-- 128

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +  +   +I  +   I    + G      D KE+A SF+      +  +  P IF Y 
Sbjct: 129 --DETVIFTVIVASFPIIFVGALQGTRTLDGDLKEMAKSFNFPWHMKFLDVYFPHIFSYV 186

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
               ++A G AW   I++E+ +       + G+GA +A +  +   P  +  V IM   +
Sbjct: 187 FPAWVSALGMAWKIVIMAELLA------TSDGIGASLATARSQLDTPTALAIVSIMIGSL 240

Query: 567 LALNRFLWHPL 577
           + +   +  P+
Sbjct: 241 MFIEYIILEPI 251


>gi|313836838|gb|EFS74552.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314929750|gb|EFS93581.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314972183|gb|EFT16280.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328907608|gb|EGG27372.1| glycine betaine transport system permease protein
           [Propionibacterium sp. P08]
          Length = 288

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   ++ A++++L+        AAKS+R   ++ PILD MQ++P L +L   +V F 
Sbjct: 93  TMQTLALVVVAVILALIVAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFG 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+V GA    IFA+     +         +  +  +  E   +F  S     W + 
Sbjct: 153 ---IGQVPGAIATIIFALPPGVRF-----TELGIRGVDAETVEAGAAFGASPRHILWRIQ 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++  +   +      VV S M+  G            +  A+ + D+   + A
Sbjct: 205 MPLAMPTVMAGVNQVIMLALSMVVLSGMVGAGGLGGD-------VVAALSQVDIGLGMEA 257

Query: 245 MLTMLGVIFLYDQL 258
            L ++ V    D++
Sbjct: 258 GLAVVVVAVYLDRI 271



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 4/139 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  VVV +I+A I+ IP+GIW       S+ I+P    +   P+  +   V+       
Sbjct: 96  TLALVVVAVILALIVAIPLGIWAAKSKRFSAIIKPILDFMQTMPSLAYLVPVIVLFGIGQ 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  +     +       G      +  E  ++F  +       I +P   P 
Sbjct: 156 VPGAIATIIFALPPGVRF----TELGIRGVDAETVEAGAAFGASPRHILWRIQMPLAMPT 211

Query: 506 YVTGAITACGGAWNASIVS 524
            + G       A +  ++S
Sbjct: 212 VMAGVNQVIMLALSMVVLS 230


>gi|218514506|ref|ZP_03511346.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli 8C-3]
          Length = 167

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 10/143 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P  QL     A   +P+ +  +     +       ++ + T + +L   I G  
Sbjct: 3   VEQALDPILQLFRQTSALALYPVFILLLGLGETSK----IFVIFWATLFPVLLATIGGVK 58

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E+A ++       +R +ILP   P    G   +        I +E+       
Sbjct: 59  EVDQKLIEMARTYGAGSLTVFRRVILPASVPAIFVGLRLSATTVLLLLIAAEMIG----- 113

Query: 534 LRTTGLGAYIAESTEKGSFPEVV 556
               G+G  +  +      P + 
Sbjct: 114 -ANKGIGFQVMNAQYNFQIPLMF 135



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L PIL + +    L      ++             E + IF IF + ++ +  + 
Sbjct: 2   SVEQALDPILQLFRQTSALALYPVFILLLGLG--------ETSKIFVIFWATLFPVLLAT 53

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +  + + L E++R++       F  + +P S+P +   + +S +     ++A+EMI 
Sbjct: 54  IGGVKEVDQKLIEMARTYGAGSLTVFRRVILPASVPAIFVGLRLSATTVLLLLIAAEMIG 113

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                    GIG  +  A     +  + 
Sbjct: 114 ANK------GIGFQVMNAQYNFQIPLMF 135


>gi|223938051|ref|ZP_03629949.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
 gi|223893265|gb|EEF59728.1| binding-protein-dependent transport systems inner membrane
           component [bacterium Ellin514]
          Length = 347

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  ++    +   + +  G+ IG+ PH      P  +++   PA  + PL +       
Sbjct: 153 SLILLLSGYALGVAVALVTGVCIGWFPHARYWGMPLLKVVGPIPATAWIPLAMVV----S 208

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+     + +     +G S     + +VA +   +       + +P   P 
Sbjct: 209 PSATCSAVGLIALAVWFPVTMLTASGISNTRASYLDVARTLGASRSYLIFKVAIPAAMPN 268

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G ++   +V+E           +GLG Y++ +     + +V   ++IM  F
Sbjct: 269 IFLGLFMGLGASFLTLVVAETVG------VKSGLGWYVSWAQGWAEYGKVYAALIIMAAF 322

Query: 566 VLALNRFLWH 575
              +   L+ 
Sbjct: 323 FSTIMTLLFK 332



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 14/245 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P I   +  + +  +I      +     P     +  +  D   L      + + +LS  
Sbjct: 102 PIIAAAICLLCLWEVITSGFRWLPMPYFPGPAGVLQSLLNDRGLLFDSTWHSLILLLSGY 161

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + +    V               +P+L ++  IP   ++   +V            A  
Sbjct: 162 ALGVAVALVTGVCIGWFPHARYWGMPLLKVVGPIPATAWIPLAMVV--------SPSATC 213

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +A+  I  +  + +T      + N      +V+R+   S     + + +P +MP +   +
Sbjct: 214 SAVGLIALAVWFPVTMLTASGISNTRASYLDVARTLGASRSYLIFKVAIPAAMPNIFLGL 273

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            M +   +  +V +E + V        G+G Y++ A    +   +  A++ M        
Sbjct: 274 FMGLGASFLTLVVAETVGVKS------GLGWYVSWAQGWAEYGKVYAALIIMAAFFSTIM 327

Query: 257 QLLFR 261
            LLF+
Sbjct: 328 TLLFK 332


>gi|269125287|ref|YP_003298657.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268310245|gb|ACY96619.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 291

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 27/267 (10%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIW-------- 381
                ++      W  +         W+ +        +     +DVL   W        
Sbjct: 27  ARRSPLARAWSALWPMLAAVAIALGVWELVVLSGWKEPWVLPGPRDVLPEFWNVVSEGGF 86

Query: 382 --LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                +TM R +V   +A +I + +G  +     +          L   P+  +FPL + 
Sbjct: 87  WAAVGLTMRRALVGFAVAIVIGVVIGSLVSQSRILRRAFGSLITGLQTMPSIAWFPLAIL 146

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                       +  +++ G    I   +IAG    P     V     + G   +R++I+
Sbjct: 147 LFKLS----ESAIMFVVVLGAAPSIANGLIAGVDYTPPILLRVGKVMGLRGLALYRHLII 202

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P +V G       AW + +  E+    +        G  +  S E    P ++  +
Sbjct: 203 PAALPSFVAGLKQGWAFAWRSLMAGELLVIINNTQSV---GTLLHYSRELSDTPRMISVM 259

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLR 586
           +++    + +++     L+    R LR
Sbjct: 260 IVILIIGILIDQ-----LFGLADRTLR 281



 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 98/242 (40%), Gaps = 15/242 (6%)

Query: 22  LLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           L A  + +G+  +++    +       PRD++      +           T  R L    
Sbjct: 43  LAAVAIALGVWELVVLSGWKEPWVLPGPRDVLPEFWNVVSEGGFWAAVGLTMRRALVGFA 102

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++   V  +L ++SR L      ++  +Q++P + +    ++ F          +E A
Sbjct: 103 VAIVIGVVIGSLVSQSRILRRAFGSLITGLQTMPSIAWFPLAILLFKL--------SESA 154

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +F +      ++   +   +   P  L  V +   L G   + +L +P ++P  V  + 
Sbjct: 155 IMFVVVLGAAPSIANGLIAGVDYTPPILLRVGKVMGLRGLALYRHLIIPAALPSFVAGLK 214

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
              +  W  ++A E++V+ +       +G+ +  + +  D   ++  M+ +L +  L DQ
Sbjct: 215 QGWAFAWRSLMAGELLVIINNTQS---VGTLLHYSRELSDTPRMISVMIVILIIGILIDQ 271

Query: 258 LL 259
           L 
Sbjct: 272 LF 273


>gi|196039936|ref|ZP_03107239.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus NVH0597-99]
 gi|196029195|gb|EDX67799.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus NVH0597-99]
          Length = 503

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|225405727|ref|ZP_03760916.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme
           DSM 15981]
 gi|225042751|gb|EEG52997.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme
           DSM 15981]
          Length = 264

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 12/247 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--T 386
           E   +    +   ++L I  +  +  +          + +    +  +   ++   I  +
Sbjct: 8   EPKAKAWLRRAAVWLLWIALWQAIAAMVRNPIIFVGPFEMLRALWDQLFDAVFWQTIGHS 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
             ++ +  + A    + +G      P +   ++PF  L+ + P   F  L +  +    L
Sbjct: 68  FGKISLGFLGAFATGLVLGSLAYRFPFLGELLEPFMSLIRSIPVASFVILALIWIGSGSL 127

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +  +   +++       +  N IAG ++      E+A  FH+   +  R+I +P + PY 
Sbjct: 128 SVCISYLVVLPI-----VYVNTIAGLASTDLRLLEMARVFHMPALKKVRFIYVPALMPYL 182

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V+G  TA G +W + I +EV            +G  +  S        +     ++    
Sbjct: 183 VSGCKTALGMSWKSGIAAEVIGIPDTS-----IGEQLYYSKLYLDTAGLFAWTFVIVVVS 237

Query: 567 LALNRFL 573
               +  
Sbjct: 238 AVFEQLF 244



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L ++ +   I  ++        P +++  +   L      Q    +  ++    + +  
Sbjct: 21  WLLWIALWQAIAAMVRNPIIFVGPFEMLRALWDQLFDAVFWQTIGHSFGKISLGFLGAFA 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V  +LA +   LG +L P + +++SIP+  F+   +++         IG+   ++  
Sbjct: 81  TGLVLGSLAYRFPFLGELLEPFMSLIRSIPVASFVILALIW---------IGSGSLSVCI 131

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +   +  +  +    L +    L E++R F +   +K  ++ VP  MP LV     ++ 
Sbjct: 132 SYLVVLPIVYVNTIAGLASTDLRLLEMARVFHMPALKKVRFIYVPALMPYLVSGCKTALG 191

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W   +A+E+I + DT      IG  +  +    D   +      ++ V  +++QL  
Sbjct: 192 MSWKSGIAAEVIGIPDTS-----IGEQLYYSKLYLDTAGLFAWTFVIVVVSAVFEQLFL 245


>gi|187923822|ref|YP_001895464.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187715016|gb|ACD16240.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 274

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 13/211 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +     IT+   V+   + + + + VG+W+   P  S+   P+ +   + P  +
Sbjct: 64  WFVGGEIYLHLWITLVETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAANSMPRVI 123

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+          +       L+ F     + FNV  G           A      G  
Sbjct: 124 LAPIFGVWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANGKH 179

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ LP    +  +   T+ G A+  S+V E            G+G  I ++      
Sbjct: 180 LLRFVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDI 233

Query: 553 PEVVLGVLIMCCFVLALNRFLW---HPLYLY 580
             V  G+L++  F L L+  +      L  +
Sbjct: 234 NTVFAGILVLTAFALILDAIVGIGERRLMKW 264



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  + A  +            A S     +  P +    S+P +       V+F
Sbjct: 73  HLWITLVETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWF 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV        F +F        F++YQ +  +   +   +R    +G     ++
Sbjct: 133 GLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANGKHLLRFV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 185 YLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEGTFDINTVFA 238

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +L +     + D ++    R ++ W  K
Sbjct: 239 GILVLTAFALILDAIVGIGERRLMKWQPK 267


>gi|228985376|ref|ZP_04145535.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228774329|gb|EEM22736.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 503

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|146339332|ref|YP_001204380.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192138|emb|CAL76143.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 253

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 83/237 (35%), Gaps = 22/237 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------------CIT 386
           R S  + +    +V  + +     S GY             + +               T
Sbjct: 3   RTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIAAT 62

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +FR+     IA ++ + +GI     P I++ ++P  ++LA  P    +P  +  + + H 
Sbjct: 63  LFRLFAGFAIAVVLGVSLGIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFGHE 122

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      +L+     + IL +   GA+         A +           ++LP   P  
Sbjct: 123 SK----VMLVAADALFPILLSTYYGATNVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSI 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +TG       +     ++E+ +       T GLG  +  +       ++ + ++ + 
Sbjct: 179 LTGCRIGLVISCIVVFLAEMIT------STDGLGHVLVTAARTFQAVDMFVPLITIS 229



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 83/227 (36%), Gaps = 14/227 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L  G+++           P  +   +   L   +  Q  + T  R+ +   I+++
Sbjct: 16  VLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIAATLFRLFAGFAIAVV 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA S  +   + PI+ ++  +P +      ++     +  KV+         
Sbjct: 76  LGVSLGIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFGHESKVM--------L 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  S Y    N+ + L   + +         W + +P +MP ++    + + 
Sbjct: 128 VAADALFPILLSTYYGATNVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSILTGCRIGLV 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                V  +EMI   D      G+G  +  A +    + +   ++T+
Sbjct: 188 ISCIVVFLAEMITSTD------GLGHVLVTAARTFQAVDMFVPLITI 228


>gi|170751535|ref|YP_001757795.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170658057|gb|ACB27112.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 308

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 88/207 (42%), Gaps = 17/207 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +T R+L+ + ++   + +        +    + +P + ++  +  + +L   +  F  
Sbjct: 108 LASTGRVLAGLALAASLSILVGVGIRYFKLFERLTLPTITLLAPVSPIAWLPVAIFMFGI 167

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                       AIF +F +  + M  S  Q +  + R+   V+R+   +  Q +  + V
Sbjct: 168 GN--------APAIFMVFIALFFTMVLSTIQQIDGVNRNYINVARTMGATKRQIYARVIV 219

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +PGL+  + +++ G W  V+ +E   VG       G+G  I LA    +   + + +
Sbjct: 220 PAILPGLLAVLRLNLFGAWMVVLVAEATGVG------YGLGQVIMLARNTFNPSLVFFTI 273

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNK 269
             +  + F +D   +L+ R ++ W  +
Sbjct: 274 TLIGLLGFAFDLLFRLVQRRLLYWLPR 300



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 13/217 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +      + V+     +  RV+  + +A+ + I VG+ I +         P   LLA   
Sbjct: 94  NTGPSPAMAVLITVLASTGRVLAGLALAASLSILVGVGIRYFKLFERLTLPTITLLAPVS 153

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              + P+ +          N     ++     + ++ + I        ++  VA +   T
Sbjct: 154 PIAWLPVAIFMFGIG----NAPAIFMVFIALFFTMVLSTIQQIDGVNRNYINVARTMGAT 209

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + +  +I+P I P  +        GAW   +V+E    G+      GLG  I  +   
Sbjct: 210 KRQIYARVIVPAILPGLLAVLRLNLFGAWMVVLVAEATGVGY------GLGQVIMLARNT 263

Query: 550 GSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583
            +   V   + ++     A +   R +   L  +  R
Sbjct: 264 FNPSLVFFTITLIGLLGFAFDLLFRLVQRRLLYWLPR 300


>gi|226945009|ref|YP_002800082.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           [Azotobacter vinelandii DJ]
 gi|226719936|gb|ACO79107.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Azotobacter vinelandii DJ]
          Length = 285

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 10/204 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++  +       ++     + +R    + I     + + +  G      + I    Q+  
Sbjct: 73  LITGYDMLANGTLLPHWLASAWRAWWGLGIGVAAAVLLALASGLTRIGEASIDSLVQIKR 132

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL +  +             L+       +  N  A          E+A + 
Sbjct: 133 AIPTLALIPLAILWLGIGET----MKIALIAGSVFVPVYINTHAAIKGIDIRHVELARTL 188

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +    + R I+LPG  P + TG   +    W + +V E  +       T G+G  +  +
Sbjct: 189 GLGKAVFIRRIVLPGALPGFFTGLRLSVTSCWASLVVLEQIN------TTQGIGYLMNRA 242

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
            + G    +V+G++I     LA +
Sbjct: 243 RDYGQTEIIVVGLVIYMVLGLASD 266



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P   +      L   +L  +   +  R    + I +    + A  +  +R     + 
Sbjct: 66  LAAPSTALITGYDMLANGTLLPHWLASAWRAWWGLGIGVAAAVLLALASGLTRIGEASID 125

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ I ++IP L  +   +++            E   I  I  S    +  + + ++  I
Sbjct: 126 SLVQIKRAIPTLALIPLAILWLGIG--------ETMKIALIAGSVFVPVYINTHAAIKGI 177

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++R+  L        + +P ++PG    + +S++  W  +V  E I        
Sbjct: 178 DIRHVELARTLGLGKAVFIRRIVLPGALPGFFTGLRLSVTSCWASLVVLEQI------NT 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             GIG  +  A        I+  ++  + +    D
Sbjct: 232 TQGIGYLMNRARDYGQTEIIVVGLVIYMVLGLASD 266


>gi|33595054|ref|NP_882697.1| hypothetical protein BPP0342 [Bordetella parapertussis 12822]
 gi|33565131|emb|CAE35926.1| putative membrane protein [Bordetella parapertussis]
          Length = 260

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 92/255 (36%), Gaps = 17/255 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P I  ++  +L    I I          P  +++ + I         +   T    + 
Sbjct: 9   LYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNALRIGYVEGQYWPHFLFTLQSTVY 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I      V  T+ A+S      + P +  +QS P +      +V+F      KV+  
Sbjct: 69  GYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASKVVMV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L + F         M  +    +      + ++ ++F+ S    F+++ +P +   +  
Sbjct: 129 ALMSFF--------PMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFA 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAILYAMLTMLGV 251
            + +S+       V SE I          G+G  I  A    D   + A L++++ +   
Sbjct: 181 GLQISVVLSLIGAVVSEFISSS------LGLGYLIQSASVNMDVATMFACLFSLVAIGLT 234

Query: 252 IFLYDQLLFRPMIVW 266
                + L R ++ W
Sbjct: 235 GTNLIRFLHRKLVFW 249



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 28/254 (11%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHF-----TYQDVLYVIWLG----------CITMFRVV 391
           F + ++ GV + I W +   I +       T + VL  + +G            T+   V
Sbjct: 8   FLYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNALRIGYVEGQYWPHFLFTLQSTV 67

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
              +I   + + VG  +         I P+   L + P     PL++    +   +    
Sbjct: 68  YGYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASK--- 124

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +++   + + +  N + G         ++  +F  +    + ++ LP    +   G  
Sbjct: 125 -VVMVALMSFFPMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFAGLQ 183

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVLA 568
            +   +   ++VSE  S       + GLG  I  ++       +      ++ +      
Sbjct: 184 ISVVLSLIGAVVSEFIS------SSLGLGYLIQSASVNMDVATMFACLFSLVAIGLTGTN 237

Query: 569 LNRFLWHPLYLYGT 582
           L RFL   L  +  
Sbjct: 238 LIRFLHRKLVFWEQ 251


>gi|304437014|ref|ZP_07396977.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369965|gb|EFM23627.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 248

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ V ++ A  +  P+GI +G+   ++  + P   L    P     P+
Sbjct: 49  GTIAIHAAYSLMRIAVGVLAAVAVGYPLGILMGYFRRVNHLLAPILYLTYPIPKIALLPV 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+        +      LL+     + ++  V    +A P            +  +  R+
Sbjct: 109 VMLLFGVGETSK----LLLVFLIIVFQVIVTVRDAVAAIPPATYFPLRVLGASFGQMVRH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P   P ++T    A   A +    +E            G+G YI ++  + ++ ++ 
Sbjct: 165 IIVPASLPKFITAVRVAMATAISVLFFTETFG------TQYGIGYYIMDAWLRVNYLDMY 218

Query: 557 LGVLIMCCFV 566
            G++++    
Sbjct: 219 AGIVVLSAIG 228



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++  +A+ + +R+   ++ ++   +    L    RR+  +L PIL +   IP +  L  
Sbjct: 49  GTIAIHAAYSLMRIAVGVLAAVAVGYPLGILMGYFRRVNHLLAPILYLTYPIPKIALLPV 108

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F      K++   L  +F +  +        +  ++  IP       R    S  Q
Sbjct: 109 VMLLFGVGETSKLLLVFLIIVFQVIVT--------VRDAVAAIPPATYFPLRVLGASFGQ 160

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KE 235
              ++ VP S+P  +  + ++M+       A  ++   +T     GIG YI  A      
Sbjct: 161 MVRHIIVPASLPKFITAVRVAMA------TAISVLFFTETFGTQYGIGYYIMDAWLRVNY 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            D+ A +  +  +  ++F+   L  R +  W
Sbjct: 215 LDMYAGIVVLSAIGLLLFILLDLAERRLCAW 245


>gi|262282511|ref|ZP_06060279.1| ABC transporter membrane-spanning permease [Streptococcus sp.
           2_1_36FAA]
 gi|262261802|gb|EEY80500.1| ABC transporter membrane-spanning permease [Streptococcus sp.
           2_1_36FAA]
          Length = 506

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  AVTALVIYAIFPILENTVTALNGIDPSLEEAGVAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPAVTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGVAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|166154199|ref|YP_001654317.1| ABC transporter permease [Chlamydia trachomatis 434/Bu]
 gi|166155074|ref|YP_001653329.1| ABC transporter permease [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335445|ref|ZP_07223689.1| ABC transporter permease [Chlamydia trachomatis L2tet1]
 gi|165930187|emb|CAP03671.1| ABC transporter permease [Chlamydia trachomatis 434/Bu]
 gi|165931062|emb|CAP06625.1| ABC transporter permease [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 589

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L P+  ++Q +P+       V++F             A I     S  + +  +++Q +
Sbjct: 87  LLHPLCVLVQCLPMFTLAPLIVLWFGWG--------TRAVIIPTALSIFFPLALTIHQGI 138

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            N P +L E    ++ + WQK + L +P  +P +   + ++MS   F  +A E +     
Sbjct: 139 KNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA---- 194

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276
                G+G  I  + +  D+   L    +LT+L +   Y  LL      +   FR+E+T+
Sbjct: 195 --TQSGLGILILESRRNYDMAMALAGLFVLTVLTLSLFYSVLLLERSTFFF--FRMEKTS 250

Query: 277 GIYPADSWVLYLF 289
                  WV  L 
Sbjct: 251 KRSFGKKWVFALI 263



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSTQGLLHPLCVLVQCLPMFTLAPLIVLWFGWGTRAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  + +  T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLYLY 580
                  +GLG  I ES         + G+ ++          VL L R  F +  +   
Sbjct: 195 -----TQSGLGILILESRRNYDMAMALAGLFVLTVLTLSLFYSVLLLERSTFFFFRMEKT 249

Query: 581 GTRCL 585
             R  
Sbjct: 250 SKRSF 254


>gi|229097433|ref|ZP_04228395.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-29]
 gi|229116429|ref|ZP_04245819.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock1-3]
 gi|228667261|gb|EEL22713.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock1-3]
 gi|228686244|gb|EEL40160.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock3-29]
          Length = 282

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 12/228 (5%)

Query: 348 WFCVV--CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V   +    +   +          +     I++FR      I   + + +G
Sbjct: 45  WQLAGVFGLVTKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGVILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA        +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFNKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGVILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    +  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFNKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 SFKGET 280


>gi|118471557|ref|YP_886972.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118172844|gb|ABK73740.1| ABC transporter permease protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 297

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T +  V+  +IA+I+   V + + +   +   + P        P     PL +  + + 
Sbjct: 96  VTTWETVIGFVIAAIVGELVAVVMIYSAGVEKTVYPLILFAQVVPKIAIAPLFIVWLGFG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +P + +++LM     + I+ + +AG  +   +  E+ S+   + ++ +  I  P   P
Sbjct: 156 P-SPKILVAVLM---AFFPIVISGLAGLRSVDPEILELTSTMGASRFKTFLKIRFPASLP 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++G   A   A   ++V E            GLG  I ++        +   ++IM  
Sbjct: 212 QLMSGLKVAATLAVTGAVVGEFVG------ANEGLGYVILQANGNVDTAMLFAALIIMSL 265

Query: 565 FVLAL 569
             +AL
Sbjct: 266 LGIAL 270



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 14/211 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P      +    +   L      TT   +   VI+ +   + A +   S  +   + P++
Sbjct: 74  PSPADTWLAAHDNAAYLAHNTWVTTWETVIGFVIAAIVGELVAVVMIYSAGVEKTVYPLI 133

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q +P +      +V+       K++ A L A F         +  S    L ++  +
Sbjct: 134 LFAQVVPKIAIAPLFIVWLGFGPSPKILVAVLMAFF--------PIVISGLAGLRSVDPE 185

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + E++ +   S ++ F  +  P S+P L+  + ++        +A    VVG+ V    G
Sbjct: 186 ILELTSTMGASRFKTFLKIRFPASLPQLMSGLKVA------ATLAVTGAVVGEFVGANEG 239

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +G  I  A    D   +  A++ M  +    
Sbjct: 240 LGYVILQANGNVDTAMLFAALIIMSLLGIAL 270


>gi|330821401|ref|YP_004350263.1| putative sulfonates ABC transporter permease [Burkholderia gladioli
           BSR3]
 gi|327373396|gb|AEA64751.1| putative sulfonates ABC transporter permease [Burkholderia gladioli
           BSR3]
          Length = 375

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   +      ++  + V +   + I   VG+ +G+   I   + P  ++L   P
Sbjct: 165 EVYLDDAPRLAGSALNSLKLLGVGVATGAAIGFLVGVSVGWSRAIGYWVHPVLRVLGPLP 224

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    PL          +       L+   T + +     +G ++    + +VA +    
Sbjct: 225 ATALLPLAFYLFP----SSWSAAVFLIALATGFPVAVLTWSGVASVGKAYYDVARTLGAN 280

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +PG  P    G     G ++   +V+E+          +GLG Y+  +   
Sbjct: 281 SRFLVLRVAIPGALPQVFVGLFMGLGASFTVLVVAEMMG------VKSGLGWYLTWAQGW 334

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLW 574
            S+  +   +++M      L   L+
Sbjct: 335 ASYTNMYAALIVMALLFSGLITLLF 359



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 75/204 (36%), Gaps = 14/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L   A  +   +   +       F+       SR +G  + P+L ++  +P    L
Sbjct: 170 DAPRLAGSALNSLKLLGVGVATGAAIGFLVGVSVGWSRAIGYWVHPVLRVLGPLPATALL 229

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  AA+F I  +  + +    +  + ++ +   +V+R+   + 
Sbjct: 230 PLAFYLF--------PSSWSAAVFLIALATGFPVAVLTWSGVASVGKAYYDVARTLGANS 281

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 282 RFLVLRVAIPGALPQVFVGLFMGLGASFTVLVVAEMMGVKS------GLGWYLTWAQGWA 335

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               +  A++ M  +      LLF
Sbjct: 336 SYTNMYAALIVMALLFSGLITLLF 359


>gi|238926155|ref|ZP_04657915.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
 gi|238885835|gb|EEQ49473.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
          Length = 248

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      ++ R+ V +++A  +  P+GI +G+   ++  + P   L    P     P+
Sbjct: 49  GTIAIHAAYSLMRIAVGVLVAVAVGYPLGILMGYFRRVNHLLAPILYLTYPIPKIALLPI 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+        +      LL+     + ++  V    +A P            +  +  R+
Sbjct: 109 VMLLFGVGETSK----LLLVFLIIVFQVIVTVRDAVAAIPPATYFPLRVLGASFGQMVRH 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           II+P   P ++T    A   A +    +E            G+G YI ++  + ++ ++ 
Sbjct: 165 IIVPASLPKFITAVRVAMATAISVLFFTETFG------TQYGIGYYIMDAWLRVNYLDMY 218

Query: 557 LGVLIMCCFV 566
            G++++    
Sbjct: 219 AGIVVLSAIG 228



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 86/211 (40%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++  +A+ + +R+   +++++   +    L    RR+  +L PIL +   IP +  L  
Sbjct: 49  GTIAIHAAYSLMRIAVGVLVAVAVGYPLGILMGYFRRVNHLLAPILYLTYPIPKIALLPI 108

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F      K++   L  +F +  +        +  ++  IP       R    S  Q
Sbjct: 109 VMLLFGVGETSKLLLVFLIIVFQVIVT--------VRDAVAAIPPATYFPLRVLGASFGQ 160

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KE 235
              ++ VP S+P  +  + ++M+       A  ++   +T     GIG YI  A      
Sbjct: 161 MVRHIIVPASLPKFITAVRVAMA------TAISVLFFTETFGTQYGIGYYIMDAWLRVNY 214

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            D+ A +  +  +  ++F+   L  R +  W
Sbjct: 215 LDMYAGIVVLSAIGLLLFILLDLAERRLCAW 245


>gi|221215174|ref|ZP_03588140.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221164858|gb|EED97338.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 340

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + +       +   VG+ IG+   I   + P  ++L   PA    
Sbjct: 135 DWPRLAGSAVNTLKLLALGFAYGVAVGFTVGVSIGWSRRIGYWVHPVLRVLGPVPATALL 194

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +       + L+   T + +     +G ++    + +VA +F  +     
Sbjct: 195 PLTFYFFPTSYS----AAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTFGASARFLV 250

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P+   G       ++   +V+E+          +GLG Y++ +    S+  
Sbjct: 251 LRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQGWASYVN 304

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      L   L+
Sbjct: 305 MYAALIVMALLFSGLIALLF 324



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  LV+    I          P        I +   D   L   A  T   +      
Sbjct: 97  LVALPLVLAAWEIATAKTGWLPTPFFAPPQALIEVYVDDWPRLAGSAVNTLKLLALGFAY 156

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F        SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 157 GVAVGFTVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PTSYSAA 208

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  + ++ R   +V+R+F  S       + +P ++P +   + M
Sbjct: 209 AFLIALATGFPVAVLTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFM 268

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 269 GLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLIAL 322

Query: 259 LF 260
           LF
Sbjct: 323 LF 324


>gi|194290023|ref|YP_002005930.1| ABC transporter permease [Cupriavidus taiwanensis LMG 19424]
 gi|193223858|emb|CAQ69867.1| putative ABC-type transport system, permease component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 263

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I ++  + VG+W+   P  S+ + P+ + + + P  +  P+       
Sbjct: 64  GVTLIETVLAFGIGTVAGLGVGLWLALSPMTSAILDPYVKAMNSMPRVILAPIFAVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A        +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANQKQLLRHVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN 570
            F L L+
Sbjct: 234 AFALVLD 240



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  + A  I  +         A S     +L P +  M S+P +       V+F
Sbjct: 62  HLGVTLIETVLAFGIGTVAGLGVGLWLALSPMTSAILDPYVKAMNSMPRVILAPIFAVWF 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   +   +R    +  Q   ++
Sbjct: 122 GLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANQKQLLRHV 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 174 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFA 227

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 228 GIVVLTAFALVLDWMVGIGEKRLMKWQPK 256


>gi|167632888|ref|ZP_02391214.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0442]
 gi|254743505|ref|ZP_05201190.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           Kruger B]
 gi|167531700|gb|EDR94365.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus anthracis str.
           A0442]
          Length = 503

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 81/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P+       
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPL------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P      L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPLLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|323144630|ref|ZP_08079218.1| ABC transporter, substrate-binding protein, QAT family
           [Succinatimonas hippei YIT 12066]
 gi|322415639|gb|EFY06385.1| ABC transporter, substrate-binding protein, QAT family
           [Succinatimonas hippei YIT 12066]
          Length = 527

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 87/240 (36%), Gaps = 23/240 (9%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +   +       A+ ISL+       +  K +RL   ++   +++QSIP +  L F 
Sbjct: 14  ELSELFIQHMNMTAIAVFISLMIGVPLGIIVTKHKRLADFVIGFANVLQSIPSIALLAFA 73

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V +            E  AI  +    +  +  + Y  +  I   + EV+R   +S  Q+
Sbjct: 74  VPFVGIG--------ERPAILMVIVYSLLPILKNTYTGIKGIAPKMLEVARGLGMSTCQR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + +  P +   ++  + +S        VA+   +         G+G +I L +  Q++ 
Sbjct: 126 LFKIESPLTASYIMSGIRIS-------AVAAVGTMTIAAFAGAGGLGWFINLGLNSQNVN 178

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
            +L   +    +   +D +L         K     T       S +  + +K   ++   
Sbjct: 179 LVLLGAIPASCLALFFDYIL--------GKLEKVVTPEGLLPASQIKNIDKKKRRMQRFS 230



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + I+ +I +P+GI +     ++  +  FA +L + P+       V  V         
Sbjct: 27  AIAVFISLMIGVPLGIIVTKHKRLADFVIGFANVLQSIPSIALLAFAVPFVGIGER---- 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++I  +   IL N   G         EVA    ++  +    I  P    Y ++G 
Sbjct: 83  PAILMVIVYSLLPILKNTYTGIKGIAPKMLEVARGLGMSTCQRLFKIESPLTASYIMSGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A     ++  A  G +         +I       +   V+LG +   C  L  +
Sbjct: 143 RISAVAAVGTMTIAAFAGAGGLG-------WFINLGLNSQNVNLVLLGAIPASCLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 YIL 198


>gi|317404830|gb|EFV85205.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 254

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     ++ R +   +IA +I +P+G+ +G        ++       + P++   PL +
Sbjct: 56  LLGDFLASVSRTLQAFVIAGVIGVPLGVLLGSNEKAYRSVEFLVDFFRSTPSSALIPLFL 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  +N       +  F     ILFN   G           A     + W+ ++ ++
Sbjct: 116 MIFGVTDMNK----IAIAAFAAVLVILFNSAYGVINARKQRVMAARVMGASRWQIFKDVL 171

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +         G  +    A    IV+E+          +GLG  I  + +  +  ++   
Sbjct: 172 IWESLQPTFVGLRSGVSMALVIVIVAEMFIGSD-----SGLGNRIINAQQVLNVRDMYAS 226

Query: 559 VLIMCCFVLALNRFL 573
           +L        LN   
Sbjct: 227 ILAAGALGYVLNILF 241



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P I  L  +V+   ++ + L        P   +  +   +    L      +  R L
Sbjct: 9   RLLPLIGPLALYVVWDLVVRLQLVSPVLLPTPGATLVALAKGMAGGPLLGDFLASVSRTL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A VI+ +       L   + +    +  ++D  +S P    +   ++ F      K+  
Sbjct: 69  QAFVIAGVIGVPLGVLLGSNEKAYRSVEFLVDFFRSTPSSALIPLFLMIFGVTDMNKIAI 128

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A  AA+  I         F+    + N  +     +R    S WQ F  + +  S+    
Sbjct: 129 AAFAAVLVI--------LFNSAYGVINARKQRVMAARVMGASRWQIFKDVLIWESLQPTF 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  D+     G+G+ I  A +  ++  +  ++L    + +
Sbjct: 181 VGLRSGVSMALVIVIVAEMFIGSDS-----GLGNRIINAQQVLNVRDMYASILAAGALGY 235

Query: 254 LYDQLLF---RPMIVWSNK 269
           + + L     + ++ WS +
Sbjct: 236 VLNILFLVLEKRVVHWSGR 254


>gi|229017594|ref|ZP_04174488.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1273]
 gi|228743663|gb|EEL93769.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           AH1273]
          Length = 544

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       +  +  R+   ++    +MQ++P        
Sbjct: 14  ELLSALSEHLQISLISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +R+  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAARAMGMNSWKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGIILTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  W+    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAARAMGMNSWKRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|196046908|ref|ZP_03114129.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus 03BB108]
 gi|196022283|gb|EDX60969.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus 03BB108]
          Length = 503

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +  A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKTPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V        +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKTPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|322516867|ref|ZP_08069766.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322124567|gb|EFX96044.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 506

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 26/197 (13%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++      A   +  +R+   ++ +  + Q+IP +  L         L+   +    L A
Sbjct: 33  AIFLAVPLAIYLSTRKRVSNWVLQLAGVFQTIPSMALL--------GLFIPIMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   LEE   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLRGIDPSLEEAGVAFGMTKWEQLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ MI+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVMIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAFLAIAF 194

Query: 256 DQLLFRPMIVWSNKFRL 272
           + LL      W  K +L
Sbjct: 195 NLLL-----KWMEKAKL 206



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  + +P+ I++  R  +S+ +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFLAVPLAIYLSTRKRVSNWVLQLAGVFQTIPSMALLGLFIPIMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLRGIDPSLEEAGVAFGMTKWEQLKKFEIPLAMPVIMSGIRTAAVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAFLAIAFNLLL 198


>gi|268680333|ref|YP_003304764.1| binding-protein-dependent transporters inner membrane component
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618364|gb|ACZ12729.1| binding-protein-dependent transport systems inner membrane
           component [Sulfurospirillum deleyianum DSM 6946]
          Length = 250

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV +  ++  ++ I VGI +G    I   ++P   LL   P   + PL++  +    
Sbjct: 61  SFARVAIGYLLGGLLGIVVGILMGMNVMIEKSLKPLISLLLPIPTLGWLPLMMLWIGINE 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P      L+     + + +  + G    P ++   A S   + W     ++LP   P 
Sbjct: 121 ALP----ITLIFICAFFPVAYATLLGIKEIPYEYINTAKSLGASSWYILIRVMLPLAAPT 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG     G  W   + SE+ +        TG+G+ + ++        +++ ++++   
Sbjct: 177 IFTGLRLEAGMVWKTVLASEMFAIP------TGIGSMMIQAESLIRVDIIMVSLMLLAFM 230

Query: 566 VLALNR 571
             +  +
Sbjct: 231 SFSFEK 236



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 14/200 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    + +  S +  R+    ++  L   V   L   +  +   L P++ ++  IP LG+
Sbjct: 49  LYSGIIIENLSHSFARVAIGYLLGGLLGIVVGILMGMNVMIEKSLKPLISLLLPIPTLGW 108

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +++            E   I  IF    + + ++    +  IP +    ++S   S
Sbjct: 109 LPLMMLWIGIN--------EALPITLIFICAFFPVAYATLLGIKEIPYEYINTAKSLGAS 160

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W     + +P + P +   + +     W  V+ASEM  +        GIGS +  A   
Sbjct: 161 SWYILIRVMLPLAAPTIFTGLRLEAGMVWKTVLASEMFAIPT------GIGSMMIQAESL 214

Query: 236 QDLLAILYAMLTMLGVIFLY 255
             +  I+ +++ +  + F +
Sbjct: 215 IRVDIIMVSLMLLAFMSFSF 234


>gi|326386867|ref|ZP_08208482.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208670|gb|EGD59472.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 337

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 71/207 (34%), Gaps = 10/207 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V      D   +      ++  ++    I + +   +G+ IG+   +     P  + +  
Sbjct: 125 VLEVFTDDWAKLAESALASLVLLIPGYAIGAALGFSLGVAIGWSRAVHYWAHPILRFVGP 184

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA  + P+   C      +     + L+   + + +     +G ++    + ++A +  
Sbjct: 185 LPATAWLPIAFFCFP----STRSASTFLIALASGFPVAVLTSSGVASVARAYYDIARNLG 240

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                  R + +P   P    G     G ++   + +E+           GLG Y+  + 
Sbjct: 241 ADPRFLVRKVAVPAALPSVFVGLFMGLGASFVVLVTAEMIG------VKAGLGFYLQWAQ 294

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLW 574
              ++  +   +++M      L   L+
Sbjct: 295 GWAAYANIYAALIVMAFLFSGLIGLLF 321



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 14/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L + A  + + ++    I     F        SR +     PIL  +  +P   +L
Sbjct: 132 DWAKLAESALASLVLLIPGYAIGAALGFSLGVAIGWSRAVHYWAHPILRFVGPLPATAWL 191

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F             A+ F I  +  + +       + ++ R   +++R+     
Sbjct: 192 PIAFFCF--------PSTRSASTFLIALASGFPVAVLTSSGVASVARAYYDIARNLGADP 243

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP ++P +   + M +   +  +V +EMI V        G+G Y+  A    
Sbjct: 244 RFLVRKVAVPAALPSVFVGLFMGLGASFVVLVTAEMIGVKA------GLGFYLQWAQGWA 297

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               I  A++ M  +      LLF
Sbjct: 298 AYANIYAALIVMAFLFSGLIGLLF 321


>gi|113868355|ref|YP_726844.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527131|emb|CAJ93476.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 263

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I ++  + VG+W+   P  S+ + P+ + + + P  +  P+       
Sbjct: 64  GVTLIETVLAFGIGTVAGLGVGLWLALSPMTSAILDPYVKAMNSMPRVILAPIFAVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A        +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANQKQLLRHVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN 570
            F L L+
Sbjct: 234 AFALVLD 240



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  + A  I  +         A S     +L P +  M S+P +       V+F
Sbjct: 62  HLGVTLIETVLAFGIGTVAGLGVGLWLALSPMTSAILDPYVKAMNSMPRVILAPIFAVWF 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   +   +R    +  Q   ++
Sbjct: 122 GLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANQKQLLRHV 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 174 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFA 227

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 228 GIVVLTAFALVLDWMVGMGEKRLMKWQPK 256


>gi|301053817|ref|YP_003792028.1| glycine betaine/choline ABC transporter ATP-binding protein
           [Bacillus anthracis CI]
 gi|300375986|gb|ADK04890.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 503

 Score = 92.7 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVEIPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + +P   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVEIPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|228914885|ref|ZP_04078490.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228844681|gb|EEM89727.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 503

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+  +++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVEIPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDVVL 198



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAELIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + +P   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVEIPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 VVL 198


>gi|195541998|gb|ACF98195.1| putative binding-protein-dependent transport systems inner membrane
           component [uncultured bacterium 1114]
          Length = 270

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 21/268 (7%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P   L     +  + +  +     +   A       +   +    +  +   +  G
Sbjct: 13  RPSLPARLLGHPVGRFAARLAIVLIIFALWEYAPLSRPLRLWVSMPSAIFVQLWQWLADG 72

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            I      T+  +++  ++ S   I  G+ +G  P  +  + PF     + P     PL 
Sbjct: 73  TIWIHMGATLLAMILGYLLGSSTGIGAGLVLGCLPRTARVLSPFLVAFYSLPKIALAPLF 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     +       L+     + +  + I G      D     +    T     R +
Sbjct: 133 IIFIGIGIGSK----VALVATTVFFLVFSSTIDGVRDADRDLIRSLTLMGATPLEIIRKV 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P+  TG   A   A+  +++SE+           GLG  I  S+          
Sbjct: 189 LIPSALPWIFTGMRIAVRYAFTNTLLSEMIG------SNRGLGFLIESSSGMFDSTGSYA 242

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            + ++  F + LN  L      +  R +
Sbjct: 243 AIFVIIIFSVTLNELL-----TWAERKM 265



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 87/269 (32%), Gaps = 27/269 (10%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--------LDVHS 60
           P +  R+  +     A  L I +I   L      + P  +   +P          L   +
Sbjct: 14  PSLPARLLGHPVGRFAARLAIVLIIFALWEYAPLSRPLRLWVSMPSAIFVQLWQWLADGT 73

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +  +   T L M+   ++          +     R   VL P L    S+P +      +
Sbjct: 74  IWIHMGATLLAMILGYLLGSSTGIGAGLVLGCLPRTARVLSPFLVAFYSLPKIALAPLFI 133

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       KV        F +F+        S    + +  RDL         +  +  
Sbjct: 134 IFIGIGIGSKVALVATTVFFLVFS--------STIDGVRDADRDLIRSLTLMGATPLEII 185

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P +   M +++   +   + SEMI          G+G  I  +    D   
Sbjct: 186 RKVLIPSALPWIFTGMRIAVRYAFTNTLLSEMIGSN------RGLGFLIESSSGMFDSTG 239

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              A+  ++      ++LL      W+ +
Sbjct: 240 SYAAIFVIIIFSVTLNELL-----TWAER 263


>gi|323692543|ref|ZP_08106776.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum
           WAL-14673]
 gi|323503409|gb|EGB19238.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum
           WAL-14673]
          Length = 251

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 12/210 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++  +     +T+   +  I+I+ I+ + +GI +   P I   + P   +    P  V
Sbjct: 46  FSELDTLGGHAAVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLYPVLVVTQTVPMIV 105

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+++  +  + + P +   +LM F   + I  +   G +    ++  +  S+    W+
Sbjct: 106 LAPILIIYMG-FGVAPKILTVVLMCF---FPIAVSFSDGLAQVDEEYVHLVRSYGAGRWK 161

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +R + +P   P  ++G   +   + + ++V E            GLG Y+         
Sbjct: 162 TYRLVKIPAAVPSLLSGLKVSATYSISGAVVGEWIGSQK------GLGYYLLRVKNSYML 215

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
            +V   VL++    L +N  +   LY    
Sbjct: 216 DKVFACVLVIIFLSLCMNGLI--RLYQLAA 243



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 16/218 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++  +   LD  +L  +A+ T    LS +VISL+   +   +      +   L 
Sbjct: 35  LPSPVQVIRTLFSELD--TLGGHAAVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLY 92

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L + Q++P++      ++Y       K        I  +     + +  S    L  +
Sbjct: 93  PVLVVTQTVPMIVLAPILIIYMGFGVAPK--------ILTVVLMCFFPIAVSFSDGLAQV 144

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +   + RS+    W+ +  + +P ++P L+  + +S +      V  E I        
Sbjct: 145 DEEYVHLVRSYGAGRWKTYRLVKIPAAVPSLLSGLKVSATYSISGAVVGEWIG------S 198

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G Y+        L  +   +L ++ +    + L+
Sbjct: 199 QKGLGYYLLRVKNSYMLDKVFACVLVIIFLSLCMNGLI 236


>gi|222150724|ref|YP_002559877.1| ABC-type transporter periplasmic glycine betaine choline-binding
           protein homolog [Macrococcus caseolyticus JCSC5402]
 gi|222119846|dbj|BAH17181.1| ABC-type transporter periplasmic glycine betaine choline-binding
           protein homolog [Macrococcus caseolyticus JCSC5402]
          Length = 504

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 55/141 (39%), Gaps = 8/141 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L Q           A++I+ L          +  ++   ++ +  ++Q+IP L  L   
Sbjct: 14  ELLQALFEHIQISFIALLIATLIAIPIGIYLTRHTKVAEPIINVTAVLQTIPSLALLGLM 73

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F            + AI A+    +  +  + Y  +  +   L+E +    ++ +++
Sbjct: 74  IPLFGIG--------RVPAIIALVIYALLPILRNTYTGIKEVDPSLKEAASGIGMNTFRQ 125

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
              + +P +MP ++  +  +M
Sbjct: 126 LTKVEIPLAMPVIMAGIRTAM 146



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 4/138 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA++I IP+GI++     ++  I     +L   P+     L++       +   +
Sbjct: 27  FIALLIATLIAIPIGIYLTRHTKVAEPIINVTAVLQTIPSLALLGLMIPLFGIGRVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G        KE AS   +  +R    + +P   P  + G 
Sbjct: 87  ALVIYALL----PILRNTYTGIKEVDPSLKEAASGIGMNTFRQLTKVEIPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVAS 528
            TA       + ++    
Sbjct: 143 RTAMVLIIGTATLAAFIG 160


>gi|45862018|gb|AAS78792.1| putative ABC transporter permease component [Paracoccus
           pantotrophus]
          Length = 275

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 90/278 (32%), Gaps = 26/278 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           + + + K       + +  P +      +   +  L   WF V      G+ W    ++ 
Sbjct: 1   MLDRLTKARPARPGVSYGAPGDGSSALISLATAVALIALWFLVT-----GMGWVRPLFLP 55

Query: 369 NHFTYQDVLYVIWL-----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           +         +                 ++ RV+    +A  I +PVGI +G    I   
Sbjct: 56  SPAAVWGKFVLAATEGVSNSTLAQHTLASLGRVLGAFFLALAIAVPVGILMGVNRVIRGL 115

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P  +     P   + PL++  +             L+       +     AG  +   
Sbjct: 116 LDPVIEFYRPLPPLAYLPLIIIWLGIG----EFPKVFLIFLAIFAPMAIAARAGVRSVSI 171

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +    A +   +  +   ++IL    P   TG     G  W   + +E+ +         
Sbjct: 172 EQIHAAYAMGASKLQVIFHVILKAALPEIFTGMRIGIGVGWTTLVAAEMVA------AHR 225

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           GLG  +  S E  +   V++G++++     A +  +  
Sbjct: 226 GLGFMVLNSAEYLASDAVIMGIIVIGILAFAFDLLIRR 263



 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 90/216 (41%), Gaps = 17/216 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L Q+   +  R+L A  ++L        L   +R +  +L P+++  + +P L +L
Sbjct: 73  SNSTLAQHTLASLGRVLGAFFLALAIAVPVGILMGVNRVIRGLLDPVIEFYRPLPPLAYL 132

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++            E   +F IF +    M  +    + ++  +    + +   S 
Sbjct: 133 PLIIIWLGIG--------EFPKVFLIFLAIFAPMAIAARAGVRSVSIEQIHAAYAMGASK 184

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  +++ +  ++P +   M + +  GW  +VA+EM+          G+G  +  + +  
Sbjct: 185 LQVIFHVILKAALPEIFTGMRIGIGVGWTTLVAAEMVA------AHRGLGFMVLNSAEYL 238

Query: 237 DLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
              A++  ++ +  + F +D L+    R +I W  K
Sbjct: 239 ASDAVIMGIIVIGILAFAFDLLIRRIERALIPWKGK 274


>gi|94984219|ref|YP_603583.1| ABC transporter related [Deinococcus geothermalis DSM 11300]
 gi|94554500|gb|ABF44414.1| ABC transporter related protein [Deinococcus geothermalis DSM
           11300]
          Length = 493

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 14/170 (8%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                AKSR L   L P +   QS PI+      + +F            + A+     S
Sbjct: 320 IGYPLAKSRPLERFLSPFVVASQSAPIVVLAPLLITWFG--------FGTVPAVLVSALS 371

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            ++ +  +    +  +P    E+  +   + WQ+   L +P ++P ++  + +++S    
Sbjct: 372 ALYPVMVATIVGVREVPATSYELFATLGATPWQRLTRLELPAALPVMLGGLRLALSLALI 431

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             V  E +         PG+G  +  A    +      A+  ++G+  L 
Sbjct: 432 GAVVWEFVS------NQPGLGFAVNQARAYYNTPRQFAAIALLIGLGVLL 475



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 10/166 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G  +     +   + PF     + P  V  PL+++   +      +   L+      + 
Sbjct: 320 IGYPLAKSRPLERFLSPFVVASQSAPIVVLAPLLITWFGFG----TVPAVLVSALSALYP 375

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++   I G    P    E+ ++   T W+    + LP   P  + G   A   A   ++V
Sbjct: 376 VMVATIVGVREVPATSYELFATLGATPWQRLTRLELPAALPVMLGGLRLALSLALIGAVV 435

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E  S         GLG  + ++    + P     + ++    + L
Sbjct: 436 WEFVS------NQPGLGFAVNQARAYYNTPRQFAAIALLIGLGVLL 475


>gi|222095877|ref|YP_002529934.1| glycine betaine/choline ABC transporter , ATP-binding protein
           [Bacillus cereus Q1]
 gi|221239935|gb|ACM12645.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus cereus Q1]
          Length = 503

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|225181928|ref|ZP_03735362.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Dethiobacter alkaliphilus AHT 1]
 gi|225167368|gb|EEG76185.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Dethiobacter alkaliphilus AHT 1]
          Length = 521

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             AM +++           +S +L   ++ +  + Q+IP L  +   V +    +     
Sbjct: 26  FVAMFLAVAIAVPIGIYLTRSEKLANPVIGVAGVFQTIPSLALVALMVPFIGIGF----- 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+F   +  +  + Y  +  +   L+E  R   ++  Q    + +P ++P +
Sbjct: 81  ---WPAIIALFLYSLLPILRNTYTGIKGVNPALKEAGRGMGMTDRQVLVMVELPLALPVI 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  ++      +V +  +    T+I   G+G +I   +       IL   +    + 
Sbjct: 138 MAGIRTAV----VLIVGAATLA---TLIGAGGLGEFIFRGLAMSIDSLILLGAIPAALLA 190

Query: 253 FLYDQLL 259
            L ++ L
Sbjct: 191 ILVERAL 197



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V + +A  I +P+GI++     +++ +   A +    P+     L+V  +         
Sbjct: 26  FVAMFLAVAIAVPIGIYLTRSEKLANPVIGVAGVFQTIPSLALVALMVPFIGIGF----W 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G        KE      +T  +    + LP   P  + G 
Sbjct: 82  PAIIALFLYSLLPILRNTYTGIKGVNPALKEAGRGMGMTDRQVLVMVELPLALPVIMAGI 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA      A+ ++ +   G       GLG +I           ++LG +      + + 
Sbjct: 142 RTAVVLIVGAATLATLIGAG-------GLGEFIFRGLAMSIDSLILLGAIPAALLAILVE 194

Query: 571 RFL 573
           R L
Sbjct: 195 RAL 197


>gi|326406394|gb|ADZ63465.1| glycine betaine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 500

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 19/202 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L ++   + + +  A++IS+        L    +    VL  +  I Q+IP L  L 
Sbjct: 16  WQALLEHIQISLISIFIAILISIPLAL---LLRRLPKIAEPVLQ-VTGIFQTIPSLALLG 71

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             L AI A+    ++ +  + Y  L  I   L E + +F ++  
Sbjct: 72  LLIPFIGIG--------SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAAIAFGMNRR 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++     +  +MP ++  +  S          + +I  G       G+G++I L I   D
Sbjct: 124 ERLMKFELSLAMPFIMAGIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMND 176

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  IL   ++   +  ++  LL
Sbjct: 177 VSLILIGAISSALLAIIFSSLL 198



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%)

Query: 398 SIIWIPVGIWIGFRPHIS-----SKIQPFAQ---LLAAFPANVFFPLVVSCVSYYHLNPN 449
           S+I I + I I     +         +P  Q   +    P+     L++  +       +
Sbjct: 26  SLISIFIAILISIPLALLLRRLPKIAEPVLQVTGIFQTIPSLALLGLLIPFIGIG----S 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   + ++    + I+ N   G         E A +F +          L    P+ + G
Sbjct: 82  LPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAAIAFGMNRRERLMKFELSLAMPFIMAG 141

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++ +   G       GLG +I           +++G +      +  
Sbjct: 142 IRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMNDVSLILIGAISSALLAIIF 194

Query: 570 NRFL 573
           +  L
Sbjct: 195 SSLL 198


>gi|226309305|ref|YP_002769265.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188422|dbj|BAH36526.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 290

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P +  +     +    +      T   ++ A +++                L  ++ P 
Sbjct: 73  TPGEAWNYFTAAVQSGEISTNLRATMTAVVIAWILASAVGVAVGLSLGLLPTLERIMSPF 132

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           LD   ++P L      +V F      KV  A     F + +S            + ++  
Sbjct: 133 LDAANAMPRLALAPLLIVIFGITMTAKVALAFTLVFFIVCSSA--------RAGVKSVDD 184

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +   +S     S  Q FW++ +P + PG+   + + +      VV SE+I   D      
Sbjct: 185 EWLRLSTVLNASKTQVFWHILLPVATPGIFAGLRLGLIYSLLGVVGSELISSRD------ 238

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
           G+G  +++   +  + A+   ++ +  V  + +Q +    R ++ W  
Sbjct: 239 GLGQLVSIYSAQFRMEAVYAILILLAIVAVVLNQAMNFAERYLLRWQP 286



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            TM  VV+  I+AS + + VG+ +G  P +   + PF     A P     PL++      
Sbjct: 96  ATMTAVVIAWILASAVGVAVGLSLGLLPTLERIMSPFLDAANAMPRLALAPLLIVIFGIT 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+ F     +  +  AG  +  +++  +++  + +  + + +I+LP   P
Sbjct: 156 MTAKVALAFTLVFFI----VCSSARAGVKSVDDEWLRLSTVLNASKTQVFWHILLPVATP 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G       +    + SE+ S         GLG  ++  + +     V   ++++  
Sbjct: 212 GIFAGLRLGLIYSLLGVVGSELISSRD------GLGQLVSIYSAQFRMEAVYAILILLAI 265

Query: 565 FVLALNRFL 573
             + LN+ +
Sbjct: 266 VAVVLNQAM 274


>gi|329943091|ref|ZP_08291865.1| NMT1/THI5 like family protein [Chlamydophila psittaci Cal10]
 gi|328814638|gb|EGF84628.1| NMT1/THI5 like family protein [Chlamydophila psittaci Cal10]
          Length = 594

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +     L    +    +L P   ++Q  P+       V++F             A I   
Sbjct: 56  SIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL--------NAVIVPT 107

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +T ++YQ + + P +L E     + +  Q F  L +P ++P +   + ++M  
Sbjct: 108 ALTVFFPLTITIYQGITSTPEELLEQFILHQATKQQIFIKLRLPHALPHIFSGLKIAMGS 167

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFR 261
             F  +A E +          G+G  I  + +  D+      +  +  + F L+  +L  
Sbjct: 168 AGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAGLFALTLLTFTLFQSILLI 221

Query: 262 PMIVWSNKFRLERTTGIYP 280
             + ++  FR+E+TT  Y 
Sbjct: 222 EKLTFA-LFRIEKTTKKYR 239



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +    C T+  ++    +A ++ I + I +         + PF  L+   P     PL+V
Sbjct: 34  IFSSSCYTLQGILGGFFLALLLSIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIV 93

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      +  +L + F     +   +  G ++ P +  E       T  + +  + 
Sbjct: 94  LWFGWGLNAVIVPTALTVFF----PLTITIYQGITSTPEELLEQFILHQATKQQIFIKLR 149

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  +G   A G A  A+I  E  +        +GLG  I ES           G
Sbjct: 150 LPHALPHIFSGLKIAMGSAGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAG 203

Query: 559 VLIMCCFVLAL 569
           +  +      L
Sbjct: 204 LFALTLLTFTL 214


>gi|331697969|ref|YP_004334208.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952658|gb|AEA26355.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 288

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 17/254 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +LV   +  L        VP  IVD +   L       +   T    L   +I + 
Sbjct: 46  FVVLILVWQFLIPLFVDDYVLPVPSSIVDSLIQQLTDPLFWGHLEVTLRESLIGFLIGVG 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T  ++ R +   L+P +   Q++P +      VV+F      K++ A + + F 
Sbjct: 106 SAILLGTAISQVRLVEKTLMPYVVAFQTVPKVALAPLFVVWFGFGLTSKIVMAAVISFF- 164

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   M  ++ + L     D  ++   F  S  Q F  + +P +MP +   + + + 
Sbjct: 165 -------PMLINVIEGLRAADADRIQMLTVFGASKLQIFRMVRLPSAMPFIFAGLDIGIV 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258
                 V  E I   +      G+G  +       D+  +   ++ +  +        + 
Sbjct: 218 FAILGAVVGEFIGAKE------GLGYLLLQTNYNFDIAGMFAVLVVLSVLGLLAHFLIRF 271

Query: 259 LFRPMIVWSNKFRL 272
             R +  W+ + R+
Sbjct: 272 AQRKIAFWAEESRV 285



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 81/245 (33%), Gaps = 14/245 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIW 401
           +L + W  ++              IV+    Q    + W    +T+   ++  +I     
Sbjct: 48  VLILVWQFLIPLFVDDYVLPVPSSIVDSLIQQLTDPLFWGHLEVTLRESLIGFLIGVGSA 107

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I +G  I     +   + P+       P     PL V    +   +      ++    + 
Sbjct: 108 ILLGTAISQVRLVEKTLMPYVVAFQTVPKVALAPLFVVWFGFGLTSK----IVMAAVISF 163

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +L NVI G  A   D  ++ + F  +  + +R + LP   P+   G       A   +
Sbjct: 164 FPMLINVIEGLRAADADRIQMLTVFGASKLQIFRMVRLPSAMPFIFAGLDIGIVFAILGA 223

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA---LNRFLWHPLY 578
           +V E            GLG  + ++        +   ++++    L    L RF    + 
Sbjct: 224 VVGEFIG------AKEGLGYLLLQTNYNFDIAGMFAVLVVLSVLGLLAHFLIRFAQRKIA 277

Query: 579 LYGTR 583
            +   
Sbjct: 278 FWAEE 282


>gi|310639345|ref|YP_003944104.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
 gi|308752921|gb|ADO44065.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
          Length = 295

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 13/207 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            Y++    +T   ++     A +I   +G+ +G        + P+   +   P   F PL
Sbjct: 87  GYMLPALWMTTQEILWGFFFAILIGFSLGVLVGETTFGERAVLPYLVAIDTMPKVAFAPL 146

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++ + +   +       L  F   + I+    AG  A   + + +  S   + W+    
Sbjct: 147 FLAWLGFGISSK----VALAAFIATFPIVVGTAAGLHAADENARMMFRSLGASRWQTLVR 202

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P   P+  TG      G    +I +E    G       G G  I  +  +   P V 
Sbjct: 203 MKIPAGLPHIFTGLKIGAVGVMAGAITAEFLGGGK------GFGELIRVAASQLQTPRVF 256

Query: 557 LGVLIMCCFVLAL---NRFLWHPLYLY 580
             +L +     AL      L   L  +
Sbjct: 257 SLILYLSVLGFALFWSVVLLERRLVFW 283



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 17/203 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT  +L     ++L  F    L  ++      ++P L  + ++P + F    + +     
Sbjct: 96  TTQEILWGFFFAILIGFSLGVLVGETTFGERAVLPYLVAIDTMPKVAFAPLFLAWLGFGI 155

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A   A F         +       L     +   + RS   S WQ    + +P 
Sbjct: 156 SSKVALAAFIATF--------PIVVGTAAGLHAADENARMMFRSLGASRWQTLVRMKIPA 207

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +   + +   G     + +E +  G       G G  I +A  +     +   +L 
Sbjct: 208 GLPHIFTGLKIGAVGVMAGAITAEFLGGGK------GFGELIRVAASQLQTPRVFSLILY 261

Query: 248 MLGVIFLY---DQLLFRPMIVWS 267
           +  + F       LL R ++ W 
Sbjct: 262 LSVLGFALFWSVVLLERRLVFWH 284


>gi|239813638|ref|YP_002942548.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239800215|gb|ACS17282.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 258

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 10/211 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  + W  +    A+  A     + V   T Q    ++  G  T    +   I+A ++ I
Sbjct: 20  LALVLWQAICVFAALPTAVLPTPWQVLQATVQYWPALVEDGWTTFKATLYGFILALVLGI 79

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+ + +     I+    P    L + P     PL++  +     +      L+      +
Sbjct: 80  PLAVAVSTFRLINLMFYPLLVALQSVPKVALAPLLLVWLGTGMESKLAIAWLV----AFF 135

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +  AG  + P +  E+A S   + W+ +  +  P   P+ VTGA  A   A   ++
Sbjct: 136 PIVVDTAAGLQSTPKELLELARSLRASPWQLFAKVRFPAALPFVVTGAKVAVTLAVIGAV 195

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           + E          + GLG  +  +T + + P
Sbjct: 196 IGEFVG------SSEGLGFLLLSATSQINTP 220



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 82/217 (37%), Gaps = 14/217 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L   LV+     +   +    +P     +        +L +    T    L   +++L+ 
Sbjct: 18  LGLALVLWQAICVFAALPTAVLPTPWQVLQATVQYWPALVEDGWTTFKATLYGFILALVL 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A   +  R + ++  P+L  +QS+P +      +V+       K+  A L A F  
Sbjct: 78  GIPLAVAVSTFRLINLMFYPLLVALQSVPKVALAPLLLVWLGTGMESKLAIAWLVAFF-- 135

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  +       L + P++L E++RS R S WQ F  +  P ++P +V    ++++ 
Sbjct: 136 ------PIVVDTAAGLQSTPKELLELARSLRASPWQLFAKVRFPAALPFVVTGAKVAVTL 189

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                V  E +   +      G+G  +  A  + +  
Sbjct: 190 AVIGAVIGEFVGSSE------GLGFLLLSATSQINTP 220


>gi|119508973|ref|ZP_01628125.1| Binding-protein-dependent transport systems inner membrane
           component [Nodularia spumigena CCY9414]
 gi|119466502|gb|EAW47387.1| Binding-protein-dependent transport systems inner membrane
           component [Nodularia spumigena CCY9414]
          Length = 524

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                   L+++ I+++   +   +  + +++   ++ I  ++Q+IP +  L F +    
Sbjct: 19  TIEHLGLTLASLSIAIVIGVLVGIILTRYKQVANNVIGIAGMIQTIPSVALLGFMLPVLG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        AI A+F   +  +  + +  +  +   ++E ++   +   Q    + 
Sbjct: 79  IGVTP--------AIVALFLYALLPIIRNTFIGIEEVDDSIKEAAKGMGMPSSQILLKVE 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P +   +  +            +I  G       G+G +I   I   +   IL  
Sbjct: 131 LPLATPVIFAGIRTAAVTNVGVATLCALIASG-------GLGQFIFRGIALNNTDMILAG 183

Query: 245 MLTMLGVIFLYDQLL 259
            +   G+  + D LL
Sbjct: 184 AIPSAGLALMLDFLL 198



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + IA +I + VGI +     +++ +   A ++   P+      ++  +         
Sbjct: 27  LASLSIAIVIGVLVGIILTRYKQVANNVIGIAGMIQTIPSVALLGFMLPVLGIG----VT 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       I+ N   G     +  KE A    +   +    + LP   P    G 
Sbjct: 83  PAIVALFLYALLPIIRNTFIGIEEVDDSIKEAAKGMGMPSSQILLKVELPLATPVIFAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + +  + + G       GLG +I       +   ++ G +      L L+
Sbjct: 143 RTAAVTNVGVATLCALIASG-------GLGQFIFRGIALNNTDMILAGAIPSAGLALMLD 195

Query: 571 RFL 573
             L
Sbjct: 196 FLL 198


>gi|319793182|ref|YP_004154822.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315595645|gb|ADU36711.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 277

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++     +    +      T+   V+   I +++ +  G+W+   P  S  + P+ +   
Sbjct: 61  LLFPEGLKGNADIYRHLGTTLLETVLAFGIGTVMGLACGLWLALAPTASLILDPYIKAAN 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P  +  P+          +       L+ F     + FNV  G           A   
Sbjct: 121 SMPRVILAPIFALWFGLGIWSKVALAVTLVFFI----VFFNVYQGVREVSPVVLANAKML 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                +  R + LP    +  +   T+ G A+  ++V E            G+G  I ++
Sbjct: 177 GANQRQLLRTVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQA 230

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   V  G++++  F LAL+  +
Sbjct: 231 EGTFDVNTVFAGIVVLTAFALALDGLV 257



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   T L  + A  I  +         A +    ++L P +    S+P +       ++
Sbjct: 75  RHLGTTLLETVLAFGIGTVMGLACGLWLALAPTASLILDPYIKAANSMPRVILAPIFALW 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   ++    +  Q    
Sbjct: 135 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPVVLANAKMLGANQRQLLRT 186

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 187 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDVNTVF 240

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             ++ +       D    L+ + ++ W  +
Sbjct: 241 AGIVVLTAFALALDGLVGLIEKRLMKWQPR 270


>gi|328542732|ref|YP_004302841.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326412479|gb|ADZ69542.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 258

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R +    +++ + + +G  +G        + P  +   A P     PL +  +    
Sbjct: 62  SLWRTLAGFALSAALAVSLGTVLGLSRRTRLAVTPLVEFFRALPPPALLPLTLLVLGVGD 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+     + IL N IAG S      ++ A  + I       ++ILPG  P 
Sbjct: 122 S----AKVLLIALVCVFPILLNTIAGVSGIDPTLRDTARMYGIGRRDMLVHVILPGALPS 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  T+   A    ++SE  +       + G+G  I ++      P +  G+L++   
Sbjct: 178 IFAGLRTSLSLAVIMMVISEFVA------ASNGIGFGIWKAKRMFDIPSMWAGILLLGLL 231

Query: 566 VLALNRFL 573
             ALN  L
Sbjct: 232 GYALNMAL 239



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R L+   +S        T+   SRR  + + P+++  ++              + L 
Sbjct: 62  SLWRTLAGFALSAALAVSLGTVLGLSRRTRLAVTPLVEFFRA--------LPPPALLPLT 113

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +   + A +  I    V+ +  +    +  I   L + +R + +       ++ +P 
Sbjct: 114 LLVLGVGDSAKVLLIALVCVFPILLNTIAGVSGIDPTLRDTARMYGIGRRDMLVHVILPG 173

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   +  S+S     +V SE +   +      GIG  I  A +  D+ ++   +L 
Sbjct: 174 ALPSIFAGLRTSLSLAVIMMVISEFVAASN------GIGFGIWKAKRMFDIPSMWAGILL 227

Query: 248 MLGVIFLYDQLL 259
           +  + +  +  L
Sbjct: 228 LGLLGYALNMAL 239


>gi|319795220|ref|YP_004156860.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315597683|gb|ADU38749.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 256

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 73/241 (30%), Gaps = 14/241 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----VIWLGCITMFRVVV 392
            +   ++L +    +   +  G       +      +         +      T +  + 
Sbjct: 8   ERWSPWLLLVAVILLWQIICAGFEVSDFIFPSPWRIWTQFWEFKEIIAGHAWRTFWVTMA 67

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A ++ + +G  IG      + I P      A P   F P++V              
Sbjct: 68  GFGLAIVVGVLMGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAG----PA 123

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L     + + I+ N+  G +    + ++V        W     I LP   PY+      
Sbjct: 124 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKV 183

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   A+  + VSE+           G+G  +  +           G++++    + +   
Sbjct: 184 AITLAFVGTTVSEM------TAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYEL 237

Query: 573 L 573
            
Sbjct: 238 F 238



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 87/242 (35%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL  V+++  I      + +   P               +  +A RT    ++   
Sbjct: 11  SPWLLLVAVILLWQIICAGFEVSDFIFPSPWRIWTQFWEFKEIIAGHAWRTFWVTMAGFG 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++   +   +   SR     + P++    ++P   F+   VV+F              
Sbjct: 71  LAIVVGVLMGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGP-------- 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ 
Sbjct: 123 AILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLK 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +  L  +
Sbjct: 183 VAITLAFVGTTVSEMTAANE------GIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYE 236

Query: 258 LL 259
           L 
Sbjct: 237 LF 238


>gi|284045524|ref|YP_003395864.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949745|gb|ADB52489.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 281

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++  + V + +A ++ I +G+ +G+   +   + P    L A P     PL++     
Sbjct: 84  LYSLQNLAVGLALAIVVGIVLGLAMGWFRILQFTVAPLMWGLYATPTVALAPLIILGFGL 143

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L+   + + I+ N + G    P+     A  F   G    R ++LP  F
Sbjct: 144 GDTSK----IVLVFIMSVFPIMLNTMEGVQTVPDSLVRAARVFGANGTALGRKVVLPATF 199

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ + G       A+   I+ E            G+G  +  +T      + +  V++M 
Sbjct: 200 PFLLVGLQRGVALAFIGEILGEFLGG------AGGIGHMLEMATFDFRMADALAIVVVMV 253

Query: 564 CFV 566
             +
Sbjct: 254 LVI 256



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP----- 62
           P   +R +      L+A VLV   +  L+    E   P  +     I   +  L      
Sbjct: 20  PRRGTRSMLWWRLALVAEVLVFLGLWQLVVAQFEWIRPTMLPPPTEIASALGELVTDDGF 79

Query: 63  -QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +   +   + ++++   V        R L   + P++  + + P +      ++
Sbjct: 80  FDALLYSLQNLAVGLALAIVVGIVLGLAMGWFRILQFTVAPLMWGLYATPTVALAPLIIL 139

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F      K        I  +F   V+ +  +  + +  +P  L   +R F  +G     
Sbjct: 140 GFGLGDTSK--------IVLVFIMSVFPIMLNTMEGVQTVPDSLVRAARVFGANGTALGR 191

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P L+  +   ++  +   +  E +          GIG  + +A  +  +   
Sbjct: 192 KVVLPATFPFLLVGLQRGVALAFIGEILGEFLGGAG------GIGHMLEMATFDFRMADA 245

Query: 242 LYAMLTMLGVI---FLYDQLLFRPMIVWSN 268
           L  ++ M+ VI    +   LL R    W +
Sbjct: 246 LAIVVVMVLVINAALIVLALLRRRFTPWHD 275


>gi|13242051|gb|AAK16531.1|AF331043_11 transporter permease 2 [Arthrobacter keyseri]
          Length = 264

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  VV+  +IA+ +  P+G  IG    + +   P      A P  +FFP+++      
Sbjct: 75  ATLQAVVIGFLIAAAVGFPLGYAIGRSKFLGAVFDPLVAGAFAIPRVIFFPILLQIFGVG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +   +L  +F     I+ +  AG  A      ++A S  ++  +    I +P + P
Sbjct: 135 VGAQSAMAALAAVF----PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       A+   I++E  +         GLG     +      P +   ++++  
Sbjct: 191 SLMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAA 244

Query: 565 FVLALNRFLW 574
             LA N  LW
Sbjct: 245 IALAGNLVLW 254



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 94/249 (37%), Gaps = 14/249 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R I  N++     V ++ +  +L         P D ++ +       S+ ++ + T   
Sbjct: 20  ARVIRDNVWRAAVLVALVLLWALLSTMSDLVASPADSLNALAERFADGSIYRHLNATLQA 79

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   +I+    F       +S+ LG V  P++    +IP + F    +  F      + 
Sbjct: 80  VVIGFLIAAAVGFPLGYAIGRSKFLGAVFDPLVAGAFAIPRVIFFPILLQIFGVGVGAQS 139

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A LAA+F         +  S    +  I   L +++RS  LS  Q    + +P   P 
Sbjct: 140 AMAALAAVF--------PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAPS 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + +  S  +  V+ +E            G+G     A    DL  +   ++ +  +
Sbjct: 192 LMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAAI 245

Query: 252 IFLYDQLLF 260
               + +L+
Sbjct: 246 ALAGNLVLW 254


>gi|307705530|ref|ZP_07642383.1| choline transporter [Streptococcus mitis SK597]
 gi|307620916|gb|EFN99999.1| choline transporter [Streptococcus mitis SK597]
          Length = 506

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I IP+ +++ +   ++  +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFISIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVL 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 21/184 (11%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++  +   A       +L   ++ I  I Q+IP L  L         L+   +    L A
Sbjct: 33  AIFISIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   L+E   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ +I+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVLIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAF 194

Query: 256 DQLL 259
           + LL
Sbjct: 195 NFLL 198


>gi|239617904|ref|YP_002941226.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
 gi|239506735|gb|ACR80222.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
          Length = 249

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 12/198 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L        T  + V+ + +A I  +  G  +G    I +  +P   ++ + P   +  L
Sbjct: 49  LEFYLTVFTTFSKAVLGLALALIAGVLAGFSMGLSRTIYTLFRPLVIVMQSVPIVSWLAL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            V        +P     + ++F T + I+  N++ G         E+A  F ++  R ++
Sbjct: 109 AVLWWGIGFRSP-----VYIVFLTLFPIITLNIVEGVRNVDVKLVEMAKVFSVSKSRIFK 163

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I      P+  +    + G  W +  V+E        + TTG+G  I ++       +V
Sbjct: 164 DIYFGSTLPFIASSLRISVGVMWKSVAVAEFM------VGTTGIGRKIFDAKSYLETTDV 217

Query: 556 VLGVLIMCCFVLALNRFL 573
               L++    +   + L
Sbjct: 218 FAYTLVLVILGILSEKML 235



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 95/238 (39%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  + +  +  + +        P      +               T  + +  + ++L+
Sbjct: 12  ILIILGIWELAYLAVGNSLLLPGPITTFKRLGELCTNLEFYLTVFTTFSKAVLGLALALI 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR +  +  P++ +MQS+PI+ +L   V+++   +           ++ 
Sbjct: 72  AGVLAGFSMGLSRTIYTLFRPLVIVMQSVPIVSWLALAVLWWGIGFRSP--------VYI 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F +    +T ++ + + N+   L E+++ F +S  + F  +    ++P +  ++ +S+ 
Sbjct: 124 VFLTLFPIITLNIVEGVRNVDVKLVEMAKVFSVSKSRIFKDIYFGSTLPFIASSLRISVG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  V  +E +V         GIG  I  A    +   +    L ++ +  L +++L
Sbjct: 184 VMWKSVAVAEFMVGTT------GIGRKIFDAKSYLETTDVFAYTLVLVILGILSEKML 235


>gi|324326312|gb|ADY21572.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 503

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|83954393|ref|ZP_00963113.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
 gi|83841430|gb|EAP80600.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
          Length = 257

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 19/251 (7%)

Query: 23  LAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           LA +L +G+    +LL       +P              +L + A  TT+ +L  ++I  
Sbjct: 8   LAILLGLGLWQGAVLLTDAPHYILPSPWRVAQAAYRARETLIENAWVTTVEVLLGLLIGT 67

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V A   A S+    +L+P+L   Q++P+        ++F      K++ A L   F
Sbjct: 68  ALGAVTAIHLALSKTAERLLLPLLVFTQAVPVFALAPLLTLWFGYGMGSKIVMAVLIIYF 127

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +T + +  L  +P    ++++S      +   Y+ +P ++P L   + ++ 
Sbjct: 128 --------PVTSAFHDGLTRVPDGYRDLAQSMGARPLRFMRYVQIPHALPSLATGLRLA- 178

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQ 257
                 V A    V+G+ V    G+G  + LA     +  +  A++ +  +  L      
Sbjct: 179 -----AVYAPIGAVIGEWVGASKGLGYLMLLANGRAKIDLMFAALIVLACLTVLLHLSVG 233

Query: 258 LLFRPMIVWSN 268
           LL + +  ++ 
Sbjct: 234 LLAQRLTRYAE 244



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 13/203 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   V++ ++I + +     I +         + P      A P     PL+     Y 
Sbjct: 54  VTTVEVLLGLLIGTALGAVTAIHLALSKTAERLLLPLLVFTQAVPVFALAPLLTLWFGYG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +   L++ F     +      G +  P+ ++++A S      R+ RY+ +P   P
Sbjct: 114 MGSKIVMAVLIIYF----PVTSAFHDGLTRVPDGYRDLAQSMGARPLRFMRYVQIPHALP 169

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   A   +++ E          + GLG  +  +  +     +   ++++ C
Sbjct: 170 SLATGLRLAAVYAPIGAVIGEWVG------ASKGLGYLMLLANGRAKIDLMFAALIVLAC 223

Query: 565 FVLAL---NRFLWHPLYLYGTRC 584
             + L      L   L  Y    
Sbjct: 224 LTVLLHLSVGLLAQRLTRYAEGR 246


>gi|332287674|ref|YP_004422575.1| putative ABC transporter permease [Chlamydophila psittaci 6BC]
 gi|313848247|emb|CBY17248.1| putative ABC transporter permease component [Chlamydophila psittaci
           RD1]
 gi|325506774|gb|ADZ18412.1| putative ABC transporter permease [Chlamydophila psittaci 6BC]
          Length = 610

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +     L    +    +L P   ++Q  P+       V++F             A I   
Sbjct: 72  SIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL--------NAVIVPT 123

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +T ++YQ + + P +L E     + +  Q F  L +P ++P +   + ++M  
Sbjct: 124 ALTVFFPLTITIYQGITSTPEELLEQFILHQATKQQIFIKLRLPHALPHIFSGLKIAMGS 183

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFR 261
             F  +A E +          G+G  I  + +  D+      +  +  + F L+  +L  
Sbjct: 184 AGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAGLFALTLLTFTLFQSILLI 237

Query: 262 PMIVWSNKFRLERTTGIYP 280
             + ++  FR+E+TT  Y 
Sbjct: 238 EKLTFA-LFRIEKTTKKYR 255



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +    C T+  ++    +A ++ I + I +         + PF  L+   P     PL+V
Sbjct: 50  IFSSSCYTLQGILGGFFLALLLSIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIV 109

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      +  +L + F     +   +  G ++ P +  E       T  + +  + 
Sbjct: 110 LWFGWGLNAVIVPTALTVFF----PLTITIYQGITSTPEELLEQFILHQATKQQIFIKLR 165

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  +G   A G A  A+I  E  +        +GLG  I ES           G
Sbjct: 166 LPHALPHIFSGLKIAMGSAGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAG 219

Query: 559 VLIMCCFVLAL 569
           +  +      L
Sbjct: 220 LFALTLLTFTL 230


>gi|217959791|ref|YP_002338343.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH187]
 gi|229138985|ref|ZP_04267562.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST26]
 gi|217066853|gb|ACJ81103.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Bacillus cereus AH187]
 gi|228644340|gb|EEL00595.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           BDRD-ST26]
          Length = 503

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ A+ A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKIPAVIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +P ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I+   +    +   +D +L
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVL 198



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    +   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKIPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 IVL 198


>gi|323357872|ref|YP_004224268.1| glycine/betaine ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323274243|dbj|BAJ74388.1| ABC-type proline/glycine betaine transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 326

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 93/234 (39%), Gaps = 16/234 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++VI +  +L   ++   +    V    + L +      A +T   +L A V+++  + 
Sbjct: 50  IIVVIVVAALLAWLLRSWKLALGTVVGFALILAMGQ-WVTAMQTLALVLVATVVAVAISV 108

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                +A++  +  VL PILD MQ++P   +L   + +F     G V G     IFA+  
Sbjct: 109 PLGIWSARNPTVRAVLKPILDFMQTMPAFVYLIPAITFFS---IGVVPGVVSTVIFALPP 165

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                        +  +  +  E   +F  +  Q    + +P +MP ++  +   +    
Sbjct: 166 G-----VRLTELGIRGVDSETVEAGHAFGATPGQILRGIQLPLAMPTIMAGVNQVIMLAL 220

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              V + ++          G+G  +  +I   +L   + A L+++ +    D+L
Sbjct: 221 SMAVVAGIV-------GADGLGKEVVQSISTVNLPKGVEAGLSVVILAVYLDRL 267



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 16/238 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLI 394
           +S +L      VV  VA  +AW    + +   T      ++ +G       T+  V+V  
Sbjct: 41  LSDVLLAAPIIVVIVVAALLAWLLRSWKLALGTVVGFALILAMGQWVTAMQTLALVLVAT 100

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A  I +P+GIW    P + + ++P    +   PA V+    ++  S   +   +   +
Sbjct: 101 VVAVAISVPLGIWSARNPTVRAVLKPILDFMQTMPAFVYLIPAITFFSIGVVPGVVSTVI 160

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                     +     G     ++  E   +F  T  +  R I LP   P  + G     
Sbjct: 161 F----ALPPGVRLTELGIRGVDSETVEAGHAFGATPGQILRGIQLPLAMPTIMAGVNQVI 216

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             A + ++V+ +           GLG  + +S    + P+ V   L +    + L+R 
Sbjct: 217 MLALSMAVVAGIVG-------ADGLGKEVVQSISTVNLPKGVEAGLSVVILAVYLDRL 267


>gi|157151096|ref|YP_001450210.1| ABC transporter membrane-spanning permease [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157075890|gb|ABV10573.1| ABC transporter membrane-spanning permease [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 506

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      +++   ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKVANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  +++  IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNVSLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++     +++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKVANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNVSLILIGAISSAVLAILFNSLL 198


>gi|73538791|ref|YP_299158.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72122128|gb|AAZ64314.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 187

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 6/154 (3%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V  PL +        +    L  ++I    W +  N  AG  + P   +    ++ + G
Sbjct: 35  PVLLPLALLWFGLGSKS----LIFVLIHSVLWPLALNTYAGFRSVPETLRMAGRNYGLRG 90

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R+   I++P   P  ++G       AW   I +E+           GLG +I ++  + 
Sbjct: 91  VRYVVLILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASS--GQGGLGWFIFQNRNEL 148

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
               V  G+  +    L +   ++  L     R 
Sbjct: 149 YTDRVFAGLATVILIGLLVEGLVFTTLERLTVRR 182



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +++F             + IF +  S +W +  + Y    ++P  L    R++ 
Sbjct: 36  VLLPLALLWFGLG--------SKSLIFVLIHSVLWPLALNTYAGFRSVPETLRMAGRNYG 87

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+G +I    
Sbjct: 88  LRGVRYVVLILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASS--GQGGLGWFIFQNR 145

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            E     +   + T++ +  L + L+F  +   + +
Sbjct: 146 NELYTDRVFAGLATVILIGLLVEGLVFTTLERLTVR 181


>gi|94311058|ref|YP_584268.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93354910|gb|ABF08999.1| ABC-type transporter, permease component: TauT family [Cupriavidus
           metallidurans CH34]
          Length = 263

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I ++  + VG+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLLETVLAFGIGTVSGLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A        +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANKRQLLRHVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN 570
            F L L+
Sbjct: 234 AFALVLD 240



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L  + A  I  +         A S     VL P +    S+P +       V+F
Sbjct: 62  HLGVTLLETVLAFGIGTVSGLGVGLWLALSPFTSAVLDPYVKAANSMPRVILAPIFAVWF 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   +   +R    +  Q   ++
Sbjct: 122 GLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANKRQLLRHV 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 174 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFA 227

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            ++ +     + D ++    + ++ W  K
Sbjct: 228 GIVVLTAFALVLDWMVTVGEKRLMRWQPK 256


>gi|312963529|ref|ZP_07778011.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
 gi|311282335|gb|EFQ60934.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
          Length = 239

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 8/154 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    T  ++L A ++ ++       +AA       ++ P+LD+MQ++P   +L  T+ 
Sbjct: 88  WQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMMRPVLDLMQTVPTFVYLIPTLT 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G V G     +FAI            Y  + ++P++L +   +F  S  Q   
Sbjct: 148 LFGL---GVVPGLISTVVFAIAAP-----IRLTYLGIRDVPQELMDAGLAFGCSRRQLLS 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            + +P +MP +   +   +      VV + ++  
Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLSMVVIAALVGA 233



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 4/168 (2%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W    +++  F     L        T+ +V+   ++  +I +P+GI    +P   + ++P
Sbjct: 69  WGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMMRP 128

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              L+   P  V+    +  ++ + L     L   ++F     I      G    P +  
Sbjct: 129 VLDLMQTVPTFVYL---IPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELM 184

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +   +F  +  +    I LP   P    G       + +  +++ +  
Sbjct: 185 DAGLAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVG 232


>gi|257086036|ref|ZP_05580397.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           D6]
 gi|256994066|gb|EEU81368.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           D6]
 gi|315025722|gb|EFT37654.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2137]
          Length = 505

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +   +  AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGQPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGQP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|86608833|ref|YP_477595.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557375|gb|ABD02332.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 257

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 96/250 (38%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +   LV+  + + L  +    +P     +  +      + +++  T    L A  ++L+
Sbjct: 22  TIVLTLVLWQVGVGLFNVPRFILPAPTQILAAMNQWSPVILRHSLTTLTSTLLAFALALV 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  ++   SR   + L P+L    +IP +  +    ++F            + A+  
Sbjct: 82  GGILLGSIIGSSRLAHLCLYPLLVGFNTIPKVALVPLLAIWFGLG--------TIPAVIT 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  ++   L  +  ++ +V RS   S W+ F  +G+P SMP L  ++ +++S
Sbjct: 134 AFLLAFFPIAVNVAVGLETVEAEMRDVLRSLGASSWEIFTKVGLPHSMPYLFASLKVAIS 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +   V SE +          G+G  I  A    D+      +  +  +  L       
Sbjct: 194 FAFVGSVISETVASNQ------GLGYLIVSASSSFDVPLAFAGLAALGIMGILLYTFFAA 247

Query: 259 LFRPMIVWSN 268
           L R ++ W  
Sbjct: 248 LERYVLSWRQ 257



 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 56/181 (30%), Gaps = 10/181 (5%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A +  I +G  IG        + P        P     PL+            +  
Sbjct: 75  AFALALVGGILLGSIIGSSRLAHLCLYPLLVGFNTIPKVALVPLLAIWFGLG----TIPA 130

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +       + I  NV  G      + ++V  S   + W  +  + LP   PY       
Sbjct: 131 VITAFLLAFFPIAVNVAVGLETVEAEMRDVLRSLGASSWEIFTKVGLPHSMPYLFASLKV 190

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   A+  S++SE  +         GLG  I  ++     P    G+  +    + L  F
Sbjct: 191 AISFAFVGSVISETVA------SNQGLGYLIVSASSSFDVPLAFAGLAALGIMGILLYTF 244

Query: 573 L 573
            
Sbjct: 245 F 245


>gi|222102208|ref|YP_002546798.1| ABC transporter component C [Agrobacterium radiobacter K84]
 gi|221728325|gb|ACM31334.1| ABC transporter component C [Agrobacterium radiobacter K84]
          Length = 255

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              +L ++       +   +    I      F        +     T++  V  ++IA++
Sbjct: 15  GIGILALWAGANALNLVESVLPPVIDVGRQFFAVLARPEFLVGFGATVYDAVRGLLIAAL 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + IP+GI IG  P +    +       +FP     P+ V           + + +     
Sbjct: 75  LAIPIGILIGMFPKLEVATRMLVDFGRSFPVIALLPVFVLLFGATQTMKVVAIGI----A 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + IL   I GA        +   SF I     +  ++LP   P+  TG   A   +  
Sbjct: 131 CFFPILLQTIYGARNLDPTIVDTVRSFRIPPHLRFFKVLLPAAGPFIATGLRIATTVSIL 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++  E+ S       T G+G  IA S      P     ++      + +    
Sbjct: 191 VAVGVEIVS------VTPGIGREIALSRSYNETPTTYAYIIYAGLLGVVITLLW 238



 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 19/255 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + +    N L           D+       L           T    +  ++I+ L 
Sbjct: 16  IGILALWAGANALNLVESVLPPVIDVGRQFFAVLARPEFLVGFGATVYDAVRGLLIAALL 75

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L     +L +    ++D  +S P++  L   V+ F      KV+   +A  F  
Sbjct: 76  AIPIGILIGMFPKLEVATRMLVDFGRSFPVIALLPVFVLLFGATQTMKVVAIGIACFF-- 133

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  +         N+   + +  RSFR+    +F+ + +P + P +   + ++ + 
Sbjct: 134 ------PILLQTIYGARNLDPTIVDTVRSFRIPPHLRFFKVLLPAAGPFIATGLRIATTV 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD----LLAILYAMLTMLGVIFLYDQL 258
                V  E++ V       PGIG  IAL+    +       I+YA L +  VI L   L
Sbjct: 188 SILVAVGVEIVSV------TPGIGREIALSRSYNETPTTYAYIIYAGL-LGVVITLLWDL 240

Query: 259 LFRPMIVWSNKFRLE 273
               ++ W  + ++E
Sbjct: 241 AEARLLHWHIRSKVE 255


>gi|160941502|ref|ZP_02088836.1| hypothetical protein CLOBOL_06392 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435586|gb|EDP13353.1| hypothetical protein CLOBOL_06392 [Clostridium bolteae ATCC
           BAA-613]
          Length = 261

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV++ ++IA    I  GI IG+     +      +++   P   + P+V+      
Sbjct: 71  ASLRRVLMALLIAWAFGISFGILIGWNKKCKAFFGSIFEVIRPIPPIAWIPIVIMWFGIG 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    LL+  GT   ++ N   G         +V   F     +    I++P   P
Sbjct: 131 ----EFPKVLLVFIGTFVPLVINTSTGIEMVDKINLDVGHVFGGNNRQILTDIVIPTALP 186

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G  T+    W   + +E+           GLGA +    +      V++ V+ +  
Sbjct: 187 SIFAGIRTSVSSGWTTVLAAEMLGAQK------GLGALVTRGWQGSDMALVLVSVITIAI 240

Query: 565 FVLAL 569
               L
Sbjct: 241 IGALL 245



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 98/239 (41%), Gaps = 20/239 (8%)

Query: 23  LAFVLVIGIINILLHGIQE--TTVPRDI----VDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +  +L+I +  +L  G        P D+    V      +   SL  +A  +  R+L A+
Sbjct: 21  VLAILMIAVGWVLFSGSHPELMPAPADVWARFVKTFTKPIAKTSLAGHAWASLRRVLMAL 80

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I+  F   +  L   +++       I ++++ IP + ++   +++F           E 
Sbjct: 81  LIAWAFGISFGILIGWNKKCKAFFGSIFEVIRPIPPIAWIPIVIMWFGIG--------EF 132

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +  +F      +  +    +  + +   +V   F  +  Q    + +P ++P +   +
Sbjct: 133 PKVLLVFIGTFVPLVINTSTGIEMVDKINLDVGHVFGGNNRQILTDIVIPTALPSIFAGI 192

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             S+S GW  V+A+EM+          G+G+ +    +  D+  +L +++T+  +  L 
Sbjct: 193 RTSVSSGWTTVLAAEMLG------AQKGLGALVTRGWQGSDMALVLVSVITIAIIGALL 245


>gi|167034265|ref|YP_001669496.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166860753|gb|ABY99160.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 331

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 73/205 (35%), Gaps = 10/205 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   +      +++ ++  ++I        G+ IG+   I   + P  ++L   P
Sbjct: 121 EVFVDDWSRLGESLLHSLWLLLNGVVIGGAAGFIAGVAIGWSHRIGYWVHPVLRILGPVP 180

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    P+          +       L+   T + +     +G ++    + EVA +   +
Sbjct: 181 STALLPICFFFFP----SSWSASVFLIALATWFPVTVLTWSGVASVDKAYYEVARTLGAS 236

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G      + +P   P+   G     G +++  +V+E+           GLG Y+  +   
Sbjct: 237 GRFLVWRVAIPAALPHVFVGLFMGLGASFSVLVVAEMMG------VKAGLGWYLQWAQGW 290

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLW 574
            ++  +   +L+M      L   L+
Sbjct: 291 AAYANMYAALLVMALLCSGLITLLF 315



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 14/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L +    +   +L+ +VI     F+       S R+G  + P+L I+  +P    L
Sbjct: 126 DWSRLGESLLHSLWLLLNGVVIGGAAGFIAGVAIGWSHRIGYWVHPVLRILGPVPSTALL 185

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +F          +  A++F I  +  + +T   +  + ++ +   EV+R+   SG
Sbjct: 186 PICFFFF--------PSSWSASVFLIALATWFPVTVLTWSGVASVDKAYYEVARTLGASG 237

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               W + +P ++P +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 238 RFLVWRVAIPAALPHVFVGLFMGLGASFSVLVVAEMMGVKA------GLGWYLQWAQGWA 291

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               +  A+L M  +      LLF
Sbjct: 292 AYANMYAALLVMALLCSGLITLLF 315


>gi|300312619|ref|YP_003776711.1| ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300075404|gb|ADJ64803.1| ABC-type transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 257

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 22/255 (8%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI-------------WL 382
           S+QR    +      V+  V I + WQ   + +  F    V  V                
Sbjct: 2   SSQRRVTGIRKKLAMVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRLA 61

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +++R+ +    A ++ I  G+           ++    +L + P+  + PL +  + 
Sbjct: 62  LFGSLYRLGMGYGSALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMG 121

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +     NL + +++     +    +V+    +        A     +     R + LP +
Sbjct: 122 FG----NLPIVVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAV 177

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +TGA  A G AW A I +E+           GLG  +A S E      V+  +L +
Sbjct: 178 MPELITGAQLAFGNAWRALISAEMLVGFGK-----GLGRTLAYSGETADMVGVMANILTI 232

Query: 563 CCFVLALNRFLWHPL 577
                 +++ +   L
Sbjct: 233 AILAALIDQVILENL 247



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 96/260 (36%), Gaps = 14/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    +  ++  +L+  I    L       VP     +    +   +       +  R+
Sbjct: 11  RKKLAMVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWE-EVQSSNFRLALFGSLYRL 69

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                 +L+    +  + A       VL   + I+QSIP + ++   ++           
Sbjct: 70  GMGYGSALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMG-------- 121

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L  +  +  +  +    S+  +  ++ +     +R    S       + +P  MP L
Sbjct: 122 FGNLPIVVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPEL 181

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    ++    W  ++++EM+V         G+G  +A + +  D++ ++  +LT+  + 
Sbjct: 182 ITGAQLAFGNAWRALISAEMLVGFGK-----GLGRTLAYSGETADMVGVMANILTIAILA 236

Query: 253 FLYDQLLFRPMIVWSNKFRL 272
            L DQ++   +     K++ 
Sbjct: 237 ALIDQVILENLKHRLLKYQY 256


>gi|228921579|ref|ZP_04084900.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228838096|gb|EEM83416.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 282

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQDLIKTGELFGHLSISVFRAAAGFFIGGGLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQDLIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|332361875|gb|EGJ39678.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK355]
          Length = 508

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|282857473|ref|ZP_06266705.1| putative binding-protein-dependent transport systems inner membrane
           component [Pyramidobacter piscolens W5455]
 gi|282584692|gb|EFB90028.1| putative binding-protein-dependent transport systems inner membrane
           component [Pyramidobacter piscolens W5455]
          Length = 257

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +      +   +      +M  ++  I ++  + + VG  +G    +   + P   + + 
Sbjct: 45  IRKVFAGEGRTMFVNLLASMKLMIPSIAVSLGVALFVGTVLGMNERLRDALYPVIYMFSV 104

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+ +  P  +     +          L+++GT W  LF  I G       + + A++  
Sbjct: 105 VPSILLSPFALLLAPDFWS----ASVFLIVYGTVWSTLFAAITGIMTIDKRYLDKAATLE 160

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G++    +ILP   P  + G + +    +   + SE+      +    G+G ++ +  
Sbjct: 161 LKGFKRLVKVILPAASPAILAGFVNSLRSTFVMLVYSEM------YGAQYGMGFFVKKYA 214

Query: 548 EKGSFPEVVLG 558
           E G +     G
Sbjct: 215 EFGLYDYTWAG 225



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 81/212 (38%), Gaps = 17/212 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +   M+ ++ +SL       T+   + RL   L P++ +   +P +    F ++   
Sbjct: 60  LLASMKLMIPSIAVSLGVALFVGTVLGMNERLRDALYPVIYMFSVVPSILLSPFALLL-- 117

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       A++F I    VW+  F+    +  I +   + + +  L G+++   + 
Sbjct: 118 ------APDFWSASVFLIVYGTVWSTLFAAITGIMTIDKRYLDKAATLELKGFKRLVKVI 171

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++   + S+   +  +V SEM           G+G ++    +          
Sbjct: 172 LPAASPAILAGFVNSLRSTFVMLVYSEMYG------AQYGMGFFVKKYAEFGLYDYTWAG 225

Query: 245 MLTMLGVIFLYDQLLF---RPMIVWSNKFRLE 273
            L M+ V+ +  Q      + ++ W+   R +
Sbjct: 226 FLFMVLVLVVVMQFFEQIKKRLLRWTTNARAQ 257


>gi|206971885|ref|ZP_03232834.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|206733270|gb|EDZ50443.1| putative sulfonate ABC transporter, permease protein [Bacillus
           cereus AH1134]
          Length = 282

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 81/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR V    I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAVAGFFIGGGLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R ++   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAVAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|325694353|gb|EGD36266.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK150]
          Length = 508

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|325696601|gb|EGD38490.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK160]
          Length = 506

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|288961131|ref|YP_003451470.1| alkanesulfonate ABC transporter permease protein [Azospirillum sp.
           B510]
 gi|288913439|dbj|BAI74926.1| alkanesulfonate ABC transporter permease protein [Azospirillum sp.
           B510]
          Length = 350

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   ++     ++  +V    + SI+ +  G+ IG+   +   + P  +L+   P
Sbjct: 140 EVYLDDWPRLLDCFAASLRLLVTGYAVGSILGVVTGVAIGWSRAVGYWVHPVLRLIGPLP 199

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A  + P+                  L+   +   +     +G +   + + ++A +   +
Sbjct: 200 ATAWLPIAFFAFPTSWS----ASVFLIALASGVPVTILTWSGVAGVNSAYYDIARTLGAS 255

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +P   P+   G     G A+   +V+E+          +G+G Y+  +   
Sbjct: 256 NRFLVLKVAVPAAMPHVFVGLFMGLGAAFAVLVVAEMLG------VKSGVGWYLQWAQGW 309

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            ++  +   +L+M      L   L+ 
Sbjct: 310 AAYGNMYAALLVMALLCSGLVTLLFR 335



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L    + +   +++   +  +   V       SR +G  + P+L ++  +P   +L
Sbjct: 145 DWPRLLDCFAASLRLLVTGYAVGSILGVVTGVAIGWSRAVGYWVHPVLRLIGPLPATAWL 204

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A++F I  +    +T   +  +  +     +++R+   S 
Sbjct: 205 PIAFFAF--------PTSWSASVFLIALASGVPVTILTWSGVAGVNSAYYDIARTLGASN 256

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + VP +MP +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 257 RFLVLKVAVPAAMPHVFVGLFMGLGAAFAVLVVAEMLGVKS------GVGWYLQWAQGWA 310

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267
               +  A+L M  +      LLFR    ++ W 
Sbjct: 311 AYGNMYAALLVMALLCSGLVTLLFRVRDRLLAWQ 344


>gi|330468486|ref|YP_004406229.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328811457|gb|AEB45629.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 278

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 10/139 (7%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  Q+    P     PL++  V             L+  G  + + FN  AG   
Sbjct: 113 DDLVDPPVQMARMLPHLGLVPLLIIWVGIG----ESLKISLVALGAFFPLYFNTYAGIRD 168

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E A +  +      R+++LPG  P    G   A G AW + +V E  +      
Sbjct: 169 IDERLVEAARTCGLGALARLRHVVLPGALPALFLGLRLAIGAAWLSLVVGEQVN------ 222

Query: 535 RTTGLGAYIAESTEKGSFP 553
             TG+G  + E+ E     
Sbjct: 223 AQTGIGFLMMEAREFSQTD 241



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 89/234 (38%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +   ++   P  ++          +L  +   +  R    ++I      +   LA   R 
Sbjct: 52  VLAAEKLPAPSAVLATGWRLTRDGTLLTHLLDSLTRAGVGLLIGGGLAVLLGALAGLLRI 111

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
              ++ P + + + +P LG +   +++       K+    L A F         + F+ Y
Sbjct: 112 GDDLVDPPVQMARMLPHLGLVPLLIIWVGIGESLKISLVALGAFF--------PLYFNTY 163

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + +I   L E +R+  L    +  ++ +P ++P L   + +++   W  +V      V
Sbjct: 164 AGIRDIDERLVEAARTCGLGALARLRHVVLPGALPALFLGLRLAIGAAWLSLV------V 217

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           G+ V    GIG  +  A +      ++  +L    +  L D   +++ R  + W
Sbjct: 218 GEQVNAQTGIGFLMMEAREFSQTDVVVLGLLVYALLGLLSDVAIRIVERRTLTW 271


>gi|327473988|gb|EGF19401.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK408]
          Length = 506

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|310659580|ref|YP_003937301.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308826358|emb|CBH22396.1| putative ABC transporter, permease protein [Clostridium
           sticklandii]
          Length = 254

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 87/235 (37%), Gaps = 11/235 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
           +     + W      V   +   +   + +  T        W+  + +++RV + +I++ 
Sbjct: 17  IIGFWIMVWQIGYIIVGRDLYLPAPFQVFSRLTELGAEKAFWMSIMYSVYRVGLGVILSI 76

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           I+ I VGI  G    +   + P    + + P   F  L +   S    N  +++  LM F
Sbjct: 77  ILGIAVGIISGMNDLVYEILNPAMVAIKSTPVMSFIILALIWFS--STNSPIFICFLMCF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W    N +AG         E+A  + ++  +  + I L  + PY+V+ ++ A G  W
Sbjct: 135 PLVWT---NTVAGIRNVDKKLLEMAHIYDVSKKQIIKKIYLLSLKPYFVSSSVQALGLGW 191

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++ +EV S          +G  +  +      P +    + +         F 
Sbjct: 192 KVTVAAEVLSNPRHS-----IGGNLYAAKAYLDIPGLFAWTITVIGLSYVFEVFF 241



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 92/234 (39%), Gaps = 14/234 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V  I  I++        P  +   +       +       +  R+   +++S++    
Sbjct: 22  IMVWQIGYIIVGRDLYLPAPFQVFSRLTELGAEKAFWMSIMYSVYRVGLGVILSIILGIA 81

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              ++  +  +  +L P +  ++S P++ F+   +++F +           + IF  F  
Sbjct: 82  VGIISGMNDLVYEILNPAMVAIKSTPVMSFIILALIWFSSTN---------SPIFICFLM 132

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  +    + N+ + L E++  + +S  Q    + +    P  V + + ++  GW 
Sbjct: 133 CFPLVWTNTVAGIRNVDKKLLEMAHIYDVSKKQIIKKIYLLSLKPYFVSSSVQALGLGWK 192

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VA+E++           IG  +  A    D+  +    +T++G+ ++++   
Sbjct: 193 VTVAAEVLSNPRHS-----IGGNLYAAKAYLDIPGLFAWTITVIGLSYVFEVFF 241


>gi|148257244|ref|YP_001241829.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409417|gb|ABQ37923.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 255

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+      + I   I + +G+ +G    +S  ++   + +   P+    P+ +  + + +
Sbjct: 60  TLASAFAGLAIGGAIGLVLGVALGLSHVLSRLMEVTIEAIRPIPSVALLPIALIALGFGY 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++ F   W +L    A          EVA    +T     R I+LP   P 
Sbjct: 120 R----MEIAIVAFACVWPVLIVTRAAVGGIEPRLIEVARVLRLTQLDRIRKIVLPAALPR 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V     A G A   ++  E+A      +   GLGA I  + +      ++  ++ +   
Sbjct: 176 IVLAFRLAAGIALIVAVTVEIA------INPLGLGAGIMTAQQALRPDLMLAYLVWIGVT 229

Query: 566 VLALN 570
             ALN
Sbjct: 230 GFALN 234



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 14/226 (6%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +          P  I   +   L   SL      T     + + I      V       S
Sbjct: 26  LAAVQSDSLAPPSAIALALADALADGSLLAATRDTLASAFAGLAIGGAIGLVLGVALGLS 85

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L  ++   ++ ++ IP +  L   ++     Y  +        I  +  + VW +   
Sbjct: 86  HVLSRLMEVTIEAIRPIPSVALLPIALIALGFGYRME--------IAIVAFACVWPVLIV 137

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              ++  I   L EV+R  RL+   +   + +P ++P +V    ++        V  E+ 
Sbjct: 138 TRAAVGGIEPRLIEVARVLRLTQLDRIRKIVLPAALPRIVLAFRLAAGIALIVAVTVEIA 197

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 I   G+G+ I  A +      +L  ++ +    F  +  L
Sbjct: 198 ------INPLGLGAGIMTAQQALRPDLMLAYLVWIGVTGFALNAAL 237


>gi|170704140|ref|ZP_02894747.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170130952|gb|EDS99672.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 238

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++     T+  + +       +   VG+ IG+   I   + P  ++L   PA    
Sbjct: 33  DWPRLVGSVGNTLKLLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALL 92

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +       + L+   T + +     +G ++    + +VA +         
Sbjct: 93  PLTFYFFPTSYS----AAAFLIALSTGFPVAVLTWSGVASVNRQYYDVARTLGANARFLV 148

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P+   G       ++   +V+E+          +GLG Y++ +    S+  
Sbjct: 149 LRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQGWASYVN 202

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      L   L+
Sbjct: 203 MYAALIVMALLFSGLIALLF 222



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 14/204 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      T   +       +   F        SRR+G  + P+L ++  +P    L
Sbjct: 33  DWPRLVGSVGNTLKLLALGFAYGVAVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALL 92

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             T  +F          +  AA F I  S  + +    +  + ++ R   +V+R+   + 
Sbjct: 93  PLTFYFF--------PTSYSAAAFLIALSTGFPVAVLTWSGVASVNRQYYDVARTLGANA 144

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P +   + M +S  +  +V +EM+ V        G+G Y++ A    
Sbjct: 145 RFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWA 198

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
             + +  A++ M  +      LLF
Sbjct: 199 SYVNMYAALIVMALLFSGLIALLF 222


>gi|229018230|ref|ZP_04175102.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1273]
 gi|229024414|ref|ZP_04180865.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1272]
 gi|228736875|gb|EEL87419.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1272]
 gi|228742998|gb|EEL93126.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1273]
          Length = 282

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 81/243 (33%), Gaps = 37/243 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R     +I      +   +   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHISISVFRAAVGFLIGGSLGIILGAIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V  E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVVELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFR 271
            F+
Sbjct: 275 NFK 277



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 391 VVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   I  S+    VG  IG            F       + P  Q+L   P     PL V
Sbjct: 78  LFGHISISVFRAAVGFLIGGSLGIILGAIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFV 137

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +   +      LL+  G  + +  N   G     +   +VA     +  +    +I
Sbjct: 138 LWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLI 193

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + GA  + G AW + +V E+         T G+G  I ++ +  +   V +G
Sbjct: 194 LPAALPNLLLGARLSLGVAWVSLVVVELMG------STEGIGYMIMDARQFSNTDIVFVG 247

Query: 559 VLIMCCFVLALNRFL 573
           ++I        +  +
Sbjct: 248 IIIFAFVGKFSDSLV 262


>gi|229494700|ref|ZP_04388458.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
 gi|229318367|gb|EEN84230.1| taurine transport system permease protein TauC [Rhodococcus
           erythropolis SK121]
          Length = 260

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 15/223 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            D+       L   SL     +T       + + L+       L A    L +    ++D
Sbjct: 44  SDVAVAFVNELGTSSLWTSLGQTVTTTAIGLALCLVIGIPAGLLLAAHPFLTVSSRFVID 103

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             +++P L  +   ++             +  A+  I    VW +       + N+  +L
Sbjct: 104 FCRTVPPLAIIPLFLLIMGP--------TQRMAVALIVAVSVWPILLQTIHGVRNVDPEL 155

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +RSFRL  W++   +  P SMP +   + +S +      + +E+I        +PG+
Sbjct: 156 LATARSFRLPLWRRLALVVAPASMPYIFTGIRISATLSLLLTIGAELIAG------VPGL 209

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-LFRPMIVWS 267
           G  I L+    D +  L  +  +LG++  +  + +   ++ W 
Sbjct: 210 GKEILLSQSVPDRMFALIIVAGLLGMLLAFAVMAIENRLLAWH 252



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 12/184 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + + +  +I IP G+ +   P ++   +         P     PL +  +    
Sbjct: 66  TVTTTAIGLALCLVIGIPAGLLLAAHPFLTVSSRFVIDFCRTVPPLAIIPLFLLIMGPTQ 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L++  + W IL   I G      +    A SF +  WR    ++ P   PY
Sbjct: 126 R----MAVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPY 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   +   +   +I +E+ +         GLG  I  S        +   +++    
Sbjct: 182 IFTGIRISATLSLLLTIGAELIAG------VPGLGKEILLSQSVPD--RMFALIIVAGLL 233

Query: 566 VLAL 569
            + L
Sbjct: 234 GMLL 237


>gi|323484482|ref|ZP_08089848.1| ABC transporter [Clostridium symbiosum WAL-14163]
 gi|323402260|gb|EGA94592.1| ABC transporter [Clostridium symbiosum WAL-14163]
          Length = 251

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 12/210 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++  +     +T+   +  I+I+ I+ + +GI +   P I   + P   +    P  V
Sbjct: 46  FSELDTLGGHAVVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLYPVLVVTQTVPMIV 105

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+++  +  + + P +   +LM F   + I  +   G +    ++  +  S+    W+
Sbjct: 106 LAPILIIYMG-FGVAPKILTVVLMCF---FPIAVSFSDGLAQVDEEYVHLVRSYGAGRWK 161

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +R + +P   P  ++G   +   + + ++V E            GLG Y+         
Sbjct: 162 TYRLVKIPAAVPSLLSGLKVSATYSISGAVVGEWIGSQK------GLGYYLLRVKNSYML 215

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
            +V   VL++    L +N  +   LY    
Sbjct: 216 DKVFACVLVIIFLSLCMNGLI--RLYQLAA 243



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 16/218 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++  +   LD  +L  +A  T    LS +VISL+   +   +      +   L 
Sbjct: 35  LPSPVQVIRTLFSELD--TLGGHAVVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLY 92

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L + Q++P++      ++Y       K        I  +     + +  S    L  +
Sbjct: 93  PVLVVTQTVPMIVLAPILIIYMGFGVAPK--------ILTVVLMCFFPIAVSFSDGLAQV 144

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +   + RS+    W+ +  + +P ++P L+  + +S +      V  E I        
Sbjct: 145 DEEYVHLVRSYGAGRWKTYRLVKIPAAVPSLLSGLKVSATYSISGAVVGEWIG------S 198

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G Y+        L  +   +L ++ +    + L+
Sbjct: 199 QKGLGYYLLRVKNSYMLDKVFACVLVIIFLSLCMNGLI 236


>gi|168702980|ref|ZP_02735257.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Gemmata obscuriglobus UQM
           2246]
          Length = 503

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG--- 114
              + +        +L +++ ++L       LAA+   LG V +    ++Q++P L    
Sbjct: 300 AGRVLETTREHLKLVLPSLLAAVLVAVPLGVLAARRPALGRVALGATGVLQTVPSLALLL 359

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F+   + + ++   G        AI A+F   +  +  + +  L +IP  L E + +  L
Sbjct: 360 FMIPVMKWLVDEGTGPAP-----AIAALFLYSLLPIVRNAHAGLTSIPAPLRESAAALGL 414

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMS 199
           S W   W + +P + P ++  +  +
Sbjct: 415 SPWAILWRIELPLAAPTILAGVRTA 439



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 6/191 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS---CVSYYHL 446
           V+  ++ A ++ +P+G+    RP +         +L   P+      ++     +     
Sbjct: 314 VLPSLLAAVLVAVPLGVLAARRPALGRVALGATGVLQTVPSLALLLFMIPVMKWLVDEGT 373

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P   ++ L    +   I+ N  AG ++ P   +E A++  ++ W     I LP   P  
Sbjct: 374 GPAPAIAAL-FLYSLLPIVRNAHAGLTSIPAPLRESAAALGLSPWAILWRIELPLAAPTI 432

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  TA       A++   + + G+      G+  +      +G+ P  VL + I   F
Sbjct: 433 LAGVRTAAVINVGTATLGGFIGAGGYGRPILRGIDKFDVPLMLEGAIPAAVLALAIEGLF 492

Query: 566 VLALNRFLWHP 576
              + R +   
Sbjct: 493 G-LVERAVARR 502


>gi|163856716|ref|YP_001631014.1| putative transport system permease protein [Bordetella petrii DSM
           12804]
 gi|163260444|emb|CAP42746.1| putative transport system permease protein [Bordetella petrii]
          Length = 262

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 10/145 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                S +    Q++   P     PLV+                L+  G  + +  N   
Sbjct: 93  SRLAESLLDTTLQMVRNIPVLALIPLVILWFGIEEAAKLS----LLALGVFFPVYLNTFH 148

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  +      E+  S+ ++GWR +R +ILPG  P  + G   A G  W   IV+E  S  
Sbjct: 149 GIRSVDPALIEMGRSYGLSGWRLYRDVILPGALPSMLVGLRFALGLVWVILIVTETIS-- 206

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEV 555
                 +G+G     + E      V
Sbjct: 207 ----AQSGIGYMTMNAREFLQTDVV 227



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 100/263 (38%), Gaps = 17/263 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR  P +  +L          +     +    P  +            L ++   + LR
Sbjct: 12  RRRALPWLVPVLVLAAWQASAQVGWLSSRVLPAPWAVARAGWSLALSGELWEHLRVSALR 71

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L  +++          L   SR    +L   L ++++IP+L  +   +++F      K+
Sbjct: 72  ALWGLLLGGGLGLALGLLNGASRLAESLLDTTLQMVRNIPVLALIPLVILWFGIEEAAKL 131

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L   F ++         + +  + ++   L E+ RS+ LSGW+ +  + +P ++P 
Sbjct: 132 SLLALGVFFPVY--------LNTFHGIRSVDPALIEMGRSYGLSGWRLYRDVILPGALPS 183

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  ++   W  ++ +E I          GIG     A +      +L  +L    +
Sbjct: 184 MLVGLRFALGLVWVILIVTETIS------AQSGIGYMTMNAREFLQTDVVLLGILLYALL 237

Query: 252 IFLYD---QLLFRPMIVWSNKFR 271
             L D   + L + ++ W+  +R
Sbjct: 238 GKLADLCARGLEQSLLPWNPAYR 260


>gi|325687926|gb|EGD29946.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK72]
          Length = 506

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|319443191|ref|ZP_07992347.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Corynebacterium variabile DSM 44702]
          Length = 305

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 16/232 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V       +   + Q   +TT   ++ ++I+ +   V+A + A+S+R    L 
Sbjct: 86  MPPPDQVVTEGLFGPNAGEMWQALWQTTKIAMTGLLIAAVIGIVWAIVMAQSKRAETALF 145

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    +Q IP+L  +     +F   +         A +F      ++ M  +    L ++
Sbjct: 146 PYAVFLQCIPVLALVPLIGFWFGFGF--------SARVFVCVLIALFPMVSNTLFGLQSV 197

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + ++    + S       L +P +MP +   +  S        V   ++        
Sbjct: 198 DPGMRDLFALHKPSRLTVLRKLEMPAAMPSIFVGLRTSGGLA----VVGAIVGDFFFKQG 253

Query: 222 LPGIGSYIALAIKEQD----LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            PGIG  +              AI+ A L  + V  ++  +  R +  W  K
Sbjct: 254 TPGIGVLLDNYRSRLQSPDLFAAIILASLLGVVVFLVFGLIGNRVVGRWYGK 305



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 69/196 (35%), Gaps = 11/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++   +W    T    +  ++IA++I I   I +       + + P+A  L   P    
Sbjct: 103 GEMWQALWQ---TTKIAMTGLLIAAVIGIVWAIVMAQSKRAETALFPYAVFLQCIPVLAL 159

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+     +           + +    + ++ N + G  +     +++ +    +    
Sbjct: 160 VPLIGFWFGFGFS----ARVFVCVLIALFPMVSNTLFGLQSVDPGMRDLFALHKPSRLTV 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + +P   P    G  T+ G A   +IV +          T G+G  +     +   P
Sbjct: 216 LRKLEMPAAMPSIFVGLRTSGGLAVVGAIVGDFF----FKQGTPGIGVLLDNYRSRLQSP 271

Query: 554 EVVLGVLIMCCFVLAL 569
           ++   +++     + +
Sbjct: 272 DLFAAIILASLLGVVV 287


>gi|257415245|ref|ZP_05592239.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           AR01/DG]
 gi|257157073|gb|EEU87033.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           ARO1/DG]
          Length = 505

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQLALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQLALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|315636350|ref|ZP_07891600.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
 gi|315479439|gb|EFU70122.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Arcobacter butzleri JV22]
          Length = 260

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 98/249 (39%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L +  +   L+G      P+D    +   L   S  +    T  R       SL  
Sbjct: 25  IFLFLALWDLGNQLYGNLVLPSPKDTFTTLFFILTDDSTIENVFITIKRAFLGFGTSLAI 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   LA       ++  PI+ I+  +P + ++   +++F          +++  IF +
Sbjct: 85  GSILGLLAGLFVTASIMSRPIVTILVGMPPIAWIVLAMIWFG--------MSDMTVIFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +     Q    I  DL++++ SF L    K + L +P     +    + ++  
Sbjct: 137 IIASFPIIFVGALQGTRTIEGDLKQMADSFHLPFTMKIFDLYLPHIFSYIFPAYISALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  VV +E++   +      GIG+ +A+A  + D    L  ++ M+G +   + L+F P
Sbjct: 197 SWKIVVMAELLSSSN------GIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEP 250

Query: 263 MIVWSNKFR 271
           +      +R
Sbjct: 251 IKREVEAWR 259



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 10/260 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R +  I   FP        +    ++    W          +           F      
Sbjct: 2   RFILKIFKDFPAYLWSGWGSLASIFLFLALWDLGNQLYGNLVLPSPKDTFTTLFFILTDD 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             I    IT+ R  +    +  I   +G+  G     S   +P   +L   P   +  L 
Sbjct: 62  STIENVFITIKRAFLGFGTSLAIGSILGLLAGLFVTASIMSRPIVTILVGMPPIAWIVLA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +       +     +   +I  +   I    + G      D K++A SFH+        +
Sbjct: 122 MIWFGMSDMT----VIFTVIIASFPIIFVGALQGTRTIEGDLKQMADSFHLPFTMKIFDL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP IF Y     I+A G +W   +++E+ S       + G+GA +A +  +   P  + 
Sbjct: 178 YLPHIFSYIFPAYISALGMSWKIVVMAELLS------SSNGIGASLAIARSQLDTPVALA 231

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            V+IM   +L +   ++ P+
Sbjct: 232 LVVIMIGSLLFIEYLIFEPI 251


>gi|225377072|ref|ZP_03754293.1| hypothetical protein ROSEINA2194_02716 [Roseburia inulinivorans DSM
           16841]
 gi|225211090|gb|EEG93444.1| hypothetical protein ROSEINA2194_02716 [Roseburia inulinivorans DSM
           16841]
          Length = 261

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 14/243 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           +FW+ +    +   A+Q++  +     T  D   +      ++  VV   ++  +I +PV
Sbjct: 27  LFWYILSIIPSTSRAFQNVVVVCQSIKTMIDRGVLGTDILSSLISVVAGYVLGFVIALPV 86

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            I + +   +   I+P+ Q +   P   + PL+V               +++       +
Sbjct: 87  AILMAWYKPVRYIIEPWIQFIRNIPPLAYVPLIVIAAGVGRKPQ----IIVITIACFLTM 142

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
              +  G         + A     T    +  +I P   P+ +T        A    I +
Sbjct: 143 CITIYQGVINVDETLIKAARVLGATDKDIFIRVIAPATLPFILTAVRLGASVALTTLIAA 202

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF---LWHPLYLYG 581
           E          T GLG  I           ++L ++I+    +++ +    L   L  + 
Sbjct: 203 E------STGATAGLGMRIRSLNNSFESAPMLLYIIIIGILGISMEKLIKYLERRLTSWQ 256

Query: 582 TRC 584
            + 
Sbjct: 257 EKR 259



 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 93/254 (36%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +      +L   I++I+    +       +   +   +D   L      + + +++  V+
Sbjct: 19  LISFAVAMLFWYILSIIPSTSRAFQNVVVVCQSIKTMIDRGVLGTDILSSLISVVAGYVL 78

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +     A L A  + +  ++ P +  +++IP L ++   V+                 
Sbjct: 79  GFVIALPVAILMAWYKPVRYIIEPWIQFIRNIPPLAYVPLIVIAAGVG--------RKPQ 130

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +    M  ++YQ + N+   L + +R    +    F  +  P ++P ++  + +
Sbjct: 131 IIVITIACFLTMCITIYQGVINVDETLIKAARVLGATDKDIFIRVIAPATLPFILTAVRL 190

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             S     ++A+E      +     G+G  I       +   +L  ++ +  +    ++L
Sbjct: 191 GASVALTTLIAAE------STGATAGLGMRIRSLNNSFESAPMLLYIIIIGILGISMEKL 244

Query: 259 ---LFRPMIVWSNK 269
              L R +  W  K
Sbjct: 245 IKYLERRLTSWQEK 258


>gi|148257245|ref|YP_001241830.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409418|gb|ABQ37924.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 255

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 10/178 (5%)

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +    ++AS+  I +G  IG    +   + P  +LL   P +   P+ ++         
Sbjct: 66  HMAYGWLLASVAGIALGAMIGSSKAMRIYVAPTLELLRPLPVSAIIPVAIAAFGL----N 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 ++ FG+ W +L   I G +A      EVA   H++       I LP   P  + 
Sbjct: 122 QSMALFVIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPDILA 181

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           G   +   A   ++V E+ +         GLG ++  S       ++  GV+++    
Sbjct: 182 GMRLSLTVALILAVVCEMLAG------LDGLGQWVLLSARAFRSADLFAGVMLLGIIG 233



 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 72/183 (39%), Gaps = 14/183 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M    +++ +       +   S+ + + + P L++++ +P+   +   +  F        
Sbjct: 67  MAYGWLLASVAGIALGAMIGSSKAMRIYVAPTLELLRPLPVSAIIPVAIAAFGLN----- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +  A+F I    +W M          +   L EV+R   +S     + + +P + P 
Sbjct: 122 ---QSMALFVIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPD 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M +S++      V  EM+        L G+G ++ L+ +      +   ++ +  +
Sbjct: 179 ILAGMRLSLTVALILAVVCEMLAG------LDGLGQWVLLSARAFRSADLFAGVMLLGII 232

Query: 252 IFL 254
            ++
Sbjct: 233 GYI 235


>gi|258654459|ref|YP_003203615.1| binding-protein-dependent transporters inner membrane component
           [Nakamurella multipartita DSM 44233]
 gi|258557684|gb|ACV80626.1| binding-protein-dependent transport systems inner membrane
           component [Nakamurella multipartita DSM 44233]
          Length = 311

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 10/250 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P++    +  R               + S   +  +L  +    V  ++          +
Sbjct: 39  PVTVITGRSTRAGRPRARRARVPRWVIKSISPLLLILLWYVLSAVGWLSANTLASPQRVV 98

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V          +      +  RV + +       +   +  G        I    Q+L  
Sbjct: 99  VKAGELLRTGELQEAIVASAQRVGLGLFFGVTAALVAALIAGLFKVGEDIIDAPIQMLRT 158

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++          +    +L+  G  + +  N+ AG         E   +  
Sbjct: 159 VPVVGLIPLLIIWFGIG----DQPKLILIALGVFFPLYLNLFAGIRGTDPALIEAGRTLG 214

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +      R++ILP   P  + G   + G +W   + +E  +       TTG+G  +  + 
Sbjct: 215 LRKLGLIRHVILPAAVPSGLVGLRYSIGVSWLILVFAETIN------ATTGIGFLVNTAR 268

Query: 548 EKGSFPEVVL 557
           E      +VL
Sbjct: 269 EFFETDTIVL 278



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 87/243 (35%), Gaps = 17/243 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +  +          P+ +V      L    L +    +  R+   +   +    V A +A
Sbjct: 80  LSAVGWLSANTLASPQRVVVKAGELLRTGELQEAIVASAQRVGLGLFFGVTAALVAALIA 139

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
              +    ++   + +++++P++G +   +++F      K+I   L   F         +
Sbjct: 140 GLFKVGEDIIDAPIQMLRTVPVVGLIPLLIIWFGIGDQPKLILIALGVFF--------PL 191

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +++  +      L E  R+  L       ++ +P ++P  +  +  S+   W  +V +
Sbjct: 192 YLNLFAGIRGTDPALIEAGRTLGLRKLGLIRHVILPAAVPSGLVGLRYSIGVSWLILVFA 251

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA---MLTMLGVIFLYDQLLFRPMIVWS 267
           E I          GIG  +  A +  +   I+        +  +  L  + L R ++ W 
Sbjct: 252 ETINATT------GIGFLVNTAREFFETDTIVLCLVLYALLGLLADLIVRGLERVLLAWR 305

Query: 268 NKF 270
             F
Sbjct: 306 PSF 308


>gi|328956693|ref|YP_004374079.1| putative glycine/betaine/carnitine/choline ABC transporter,
           substrate binding and membrane-spanning subunits
           [Carnobacterium sp. 17-4]
 gi|328673017|gb|AEB29063.1| putative glycine/betaine/carnitine/choline ABC transporter,
           substrate binding and membrane-spanning subunits
           [Carnobacterium sp. 17-4]
          Length = 505

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 25/206 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             ++ I+++     A    K ++   V++ I  I Q+IP L  L  
Sbjct: 13  SDLLTALIEHMQLSFISLFIAVIIAIPLAIYLTKHKKSATVMIQITSIFQTIPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               + AI A+    +  +  + Y  +  +   L E + +  ++ W+
Sbjct: 73  MIPLVGIG--------SVPAIIALVLYALLPILRNAYTGIMEVDPSLIEAADAMGMNRWR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           K   + +P +MP ++  +  +M           ++++G   I    IG+      I L I
Sbjct: 125 KLAKVQIPLAMPIIMAGIRNAM-----------VLIIGTGTIAAL-IGAGGLGSLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   IL   +    +   +D LL
Sbjct: 173 DRGNNYLILLGAIPAALLAIFFDYLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA II IP+ I++      ++ +     +    P+     L++  V       ++
Sbjct: 27  FISLFIAVIIAIPLAIYLTKHKKSATVMIQITSIFQTIPSLALLGLMIPLVGIG----SV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         E A +  +  WR    + +P   P  + G 
Sbjct: 83  PAIIALVLYALLPILRNAYTGIMEVDPSLIEAADAMGMNRWRKLAKVQIPLAMPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A         ++ +   G +               ++G+   ++LG +      +  +
Sbjct: 143 RNAMVLIIGTGTIAALIGAGGLGSLIL-------LGIDRGNNYLILLGAIPAALLAIFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 YLL 198


>gi|229030597|ref|ZP_04186632.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1271]
 gi|228730764|gb|EEL81709.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH1271]
          Length = 282

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 22/244 (9%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------------LYVIWLGCITMFR 389
            +L       +  + I         +        +              +     +++FR
Sbjct: 29  KVLVRAITIPIIVLIIWQLAGVFDLVSKTILPTPLDIFLAFQELIKTGELFGHLSVSVFR 88

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
                 I   + I +G  +GF       + P  Q+L   P     PL V    +   +  
Sbjct: 89  AAAGFFIGGGLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK- 147

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + G
Sbjct: 148 ---VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLG 204

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  + G AW + +V+E+         T G+G  I ++ +  +   V +G++I        
Sbjct: 205 ARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFS 258

Query: 570 NRFL 573
           +  +
Sbjct: 259 DSLV 262



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSVSVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|152991333|ref|YP_001357055.1| sulfonate/nitrate ABC transporter permease [Nitratiruptor sp.
           SB155-2]
 gi|151423194|dbj|BAF70698.1| sulfonate/nitrate ABC transporter, permease [Nitratiruptor sp.
           SB155-2]
          Length = 260

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 14/236 (5%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           ++G      P      V             S T  R++    +SL    +   +A     
Sbjct: 38  IYGDMILPSPLQSFQTVLELFKDKEFLDNLSITIDRVIVGFGLSLTIGTILGLIAGFFIT 97

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
             +   PI+ I+  +P + ++   +++F           ++   F +F + +  +     
Sbjct: 98  ASVASRPIITILMGMPPIAWIVLAMIWFGMG--------DMTVEFTVFVASMPIVFIGAL 149

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q    +    EE++ +F++    KF  + +P     +  + + ++   W  VV +E++  
Sbjct: 150 QGTRTLEDKFEEMADTFKVPKLMKFTDIYLPHIFSYIFPSWVSALGMAWKIVVMAELLAT 209

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            D      GIG+ +A+A  + D    L  ++ M+ ++ + + +   P+     K+R
Sbjct: 210 SD------GIGAALAMARSQLDTKTALALVVIMIALLMIVEYIFLEPIKKEVEKWR 259



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 10/251 (3%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
           FP+       +    ++    W          I    +               +    IT
Sbjct: 11  FPKFLWGGWGSIAAIFLFIAAWDVGNQIYGDMILPSPLQSFQTVLELFKDKEFLDNLSIT 70

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + RV+V   ++  I   +G+  GF    S   +P   +L   P   +  L +       +
Sbjct: 71  IDRVIVGFGLSLTIGTILGLIAGFFITASVASRPIITILMGMPPIAWIVLAMIWFGMGDM 130

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +   +   +    + G     + F+E+A +F +     +  I LP IF Y 
Sbjct: 131 TVE----FTVFVASMPIVFIGALQGTRTLEDKFEEMADTFKVPKLMKFTDIYLPHIFSYI 186

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
               ++A G AW   +++E+ +       + G+GA +A +  +      +  V+IM   +
Sbjct: 187 FPSWVSALGMAWKIVVMAELLA------TSDGIGAALAMARSQLDTKTALALVVIMIALL 240

Query: 567 LALNRFLWHPL 577
           + +      P+
Sbjct: 241 MIVEYIFLEPI 251


>gi|332671831|ref|YP_004454839.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
 gi|332340869|gb|AEE47452.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
          Length = 284

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  R    + +  +    + +  G      + +    Q+  A P+    PL++  +  
Sbjct: 89  AVSAGRASAGLALGIVAGTLLALLSGLSRWGEALVDGPVQVKRAIPSLALLPLLILWLGI 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     + ++ G    +  +   G       + E+A +  ++ W++ R ++LPG  
Sbjct: 149 GET----MKVVTILLGVLVPVYIHTHNGLRTIDARYVELAETIGLSRWQFVRRVVLPGAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P ++ G   A  GAW + +V E  +       T G+G  +  +   G    +V+G+++  
Sbjct: 205 PGFLLGLRFAVTGAWLSLVVVEQING------TAGIGYMMELARTYGQTDVIVVGLVLYG 258

Query: 564 CFVL---ALNRFLWHPLYLY 580
                  AL R +      +
Sbjct: 259 LLGFGSDALVRLVQRRALAW 278



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 17/230 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +  + P  +V      L    L +  + +  R  + + + ++   + A L+  SR    +
Sbjct: 63  RTLSAPWTVVTTARDLLADGRLQENLAVSAGRASAGLALGIVAGTLLALLSGLSRWGEAL 122

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           +   + + ++IP         +  + L    +   E   +  I    +  +    +  L 
Sbjct: 123 VDGPVQVKRAIPS--------LALLPLLILWLGIGETMKVVTILLGVLVPVYIHTHNGLR 174

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            I     E++ +  LS WQ    + +P ++PG +  +  +++G W  +V  E I      
Sbjct: 175 TIDARYVELAETIGLSRWQFVRRVVLPGALPGFLLGLRFAVTGAWLSLVVVEQI------ 228

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
               GIG  + LA        I+  ++    + F  D   +L+ R  + W
Sbjct: 229 NGTAGIGYMMELARTYGQTDVIVVGLVLYGLLGFGSDALVRLVQRRALAW 278


>gi|315149413|gb|EFT93429.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0012]
          Length = 505

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|229491739|ref|ZP_04385560.1| putative binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
 gi|229321420|gb|EEN87220.1| putative binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
          Length = 290

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 17/205 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   ++ A +++                L  ++ P LD   ++P L      +V F   
Sbjct: 96  ATMTAVVIAWILASAVGVAVGLSLGLLPTLERIMSPFLDAANAMPRLALAPLLIVIFGIT 155

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV  A     F + +S            + ++  +   +S     S  Q FW++ +P
Sbjct: 156 MTAKVALAFTLVFFIVCSSA--------RAGVKSVDDEWLRLSTVLNASKTQVFWHILLP 207

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + PG+   + + +      VV SE+I   D      G+G  +++   +  + A+   ++
Sbjct: 208 VATPGIFAGLRLGLIYSLLGVVGSELISSRD------GLGQLVSIYSAQFRMEAVYAILI 261

Query: 247 TMLGVIFLYDQLL---FRPMIVWSN 268
            +  V  + +Q +    R ++ W  
Sbjct: 262 LLAIVAVVLNQAMNFAERYLLRWQP 286



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 18/262 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF--WFCVVCGVAIGIAWQSIGYIVNHF 371
            +  R+   +        + L      ++ L     W   V     G AW      V   
Sbjct: 29  ARQRRSGTRLTIRVRLAQVALLLVLLGAWQLVASQGWIEPVLAKTPGEAWAYFTAAVQS- 87

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +      TM  VV+  I+AS + + VG+ +G  P +   + PF     A P  
Sbjct: 88  -----GEISTNLRATMTAVVIAWILASAVGVAVGLSLGLLPTLERIMSPFLDAANAMPRL 142

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++                L+ F     +  +  AG  +  +++  +++  + +  
Sbjct: 143 ALAPLLIVIFGITMTAKVALAFTLVFFI----VCSSARAGVKSVDDEWLRLSTVLNASKT 198

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + + +I+LP   P    G       +    + SE+ S         GLG  ++  + +  
Sbjct: 199 QVFWHILLPVATPGIFAGLRLGLIYSLLGVVGSELISSRD------GLGQLVSIYSAQFR 252

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V   ++++    + LN+ +
Sbjct: 253 MEAVYAILILLAIVAVVLNQAM 274


>gi|297567629|ref|YP_003686600.1| ABC transporter related protein [Meiothermus silvanus DSM 9946]
 gi|296852078|gb|ADH65092.1| ABC transporter related protein [Meiothermus silvanus DSM 9946]
          Length = 257

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F +     +     IT   +++  +I +++ + +G+W+   P +S+ + P+ + L A P 
Sbjct: 46  FRWFAEGEIYRHLWITSLEMLLTFLIGTLLGVVMGLWLALFPGVSAVLDPYIKALNAIPR 105

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V  P+         L+       L+ F       FN   G           A      G
Sbjct: 106 IVLAPIFTLWFGLGVLSKVALGVTLVFFVAF----FNTYQGVKEVSPVVLANARLLGAGG 161

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +  R++ LP    +  +   T+ G A   ++V E            GLG  IA++    
Sbjct: 162 GQLLRHVYLPSAASWIFSSLRTSIGFAVIGAVVGEYLG------AAAGLGYLIAQAEGVF 215

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               V  G++++  FVL L+  +
Sbjct: 216 DTTGVFAGMVVLMVFVLILDALV 238



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 88/230 (38%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P ++   V        + ++   T+L ML   +I  L   V     A    +  VL P
Sbjct: 36  SRPSEVAQRVFRWFAEGEIYRHLWITSLEMLLTFLIGTLLGVVMGLWLALFPGVSAVLDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +       ++F      KV        F  F        F+ YQ +  + 
Sbjct: 96  YIKALNAIPRIVLAPIFTLWFGLGVLSKVALGVTLVFFVAF--------FNTYQGVKEVS 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R     G Q   ++ +P +   +  ++  S+    F V+ +   VVG+ +   
Sbjct: 148 PVVLANARLLGAGGGQLLRHVYLPSAASWIFSSLRTSIG---FAVIGA---VVGEYLGAA 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
            G+G  IA A    D   +   M+ ++  + + D L+    R ++VW  +
Sbjct: 202 AGLGYLIAQAEGVFDTTGVFAGMVVLMVFVLILDALVGTVERRLLVWRPR 251


>gi|311105661|ref|YP_003978514.1| binding-protein-dependent transporter inner membrane component
           family protein 30 [Achromobacter xylosoxidans A8]
 gi|310760350|gb|ADP15799.1| binding-protein-dependent transport system inner membrane component
           family protein 30 [Achromobacter xylosoxidans A8]
          Length = 258

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 92/234 (39%), Gaps = 17/234 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +  ++   +P      + +  + +    +A+ T +  L+   +++      A +   SR 
Sbjct: 31  IFQVRAIMLPLPGQVALELAAEWNWYAGHAAYTLMTTLAGFALAVAAGVAIAVMLVGSRW 90

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               + P++  + S+P +      V++       K+  A L A+FA        M     
Sbjct: 91  FERFVYPLIVALNSVPKVAIAPLFVIWMGTGAEPKIAIAFLIAVFA--------MIVDTV 142

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L ++P+D+ ++ R  + S    F+ + +P ++P ++  M +S+S      +  E +  
Sbjct: 143 HGLRSVPQDVLDLGRVLKASRRDFFFKVRLPSALPSILAGMKVSISLALVGAIVGEFVS- 201

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
                   G+G  I  A    D + +  A+  +  +  L   L   L R +  W
Sbjct: 202 -----SQRGLGYVIMSAQGTFDTVRVFAAIFVLALMGMLLFALLVWLERRVTPW 250



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 65/200 (32%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +  +       T+   +    +A    + + + +         + P    L + P    
Sbjct: 51  AEWNWYAGHAAYTLMTTLAGFALAVAAGVAIAVMLVGSRWFERFVYPLIVALNSVPKVAI 110

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL V  +      P + ++ L+     + ++ + + G  + P D  ++      +   +
Sbjct: 111 APLFVIWMGTG-AEPKIAIAFLI---AVFAMIVDTVHGLRSVPQDVLDLGRVLKASRRDF 166

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + LP   P  + G   +   A   +IV E  S         GLG  I  +       
Sbjct: 167 FFKVRLPSALPSILAGMKVSISLALVGAIVGEFVS------SQRGLGYVIMSAQGTFDTV 220

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V   + ++    + L   L
Sbjct: 221 RVFAAIFVLALMGMLLFALL 240


>gi|46446220|ref|YP_007585.1| hypothetical protein pc0586 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399861|emb|CAF23310.1| hypothetical protein pc0586 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 557

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 84/239 (35%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  + V    +     +     P   +    I         +   T   +L    ++  
Sbjct: 7   FLFILFVWEFFSYFNPNLIWVLPPPSQIFNQLIE-KPDCFLFHTGVTLKEILGGFALAFS 65

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F  A +          L P   I+Q IP+       +++F   Y        +A    
Sbjct: 66  VAFPLAWIMDHFSIARNFLQPFFVIIQCIPMFTLAPIMIMWFGWSY--------IAIAIP 117

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +T +++Q L ++P++L +       + WQ F  L +P+S+P L   + +S +
Sbjct: 118 TALMIFFPLTITLFQGLRSVPKELTDYFMINHATHWQIFCKLKLPWSLPHLFSGLRLSAA 177

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                 +A E     +      G+G  +  + ++ DL     A+  +  + +L   ++ 
Sbjct: 178 IAGIAAIAGEWAGAQN------GLGVLMVESRRDMDLATNFAALFCLTLLSYLIYSIIL 230



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            ++   +T+  ++    +A  +  P+   +       + +QPF  ++   P     P+++
Sbjct: 45  FLFHTGVTLKEILGGFALAFSVAFPLAWIMDHFSIARNFLQPFFVIIQCIPMFTLAPIMI 104

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               + ++   +  +L++ F     +   +  G  + P +  +     H T W+ +  + 
Sbjct: 105 MWFGWSYIAIAIPTALMIFF----PLTITLFQGLRSVPKELTDYFMINHATHWQIFCKLK 160

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  +G   +   A  A+I  E A          GLG  + ES            
Sbjct: 161 LPWSLPHLFSGLRLSAAIAGIAAIAGEWAG------AQNGLGVLMVESRRDMDLATNFAA 214

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +  +      +   +    Y    +  
Sbjct: 215 LFCLTLLSYLIYSIILLIEYFILKKRF 241


>gi|326775239|ref|ZP_08234504.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655572|gb|EGE40418.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 287

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 10/159 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P        P     PL V  + +          L+ +    + ++ +++ 
Sbjct: 112 SSTVERTLYPILLFAQVVPKIAIAPLFVVWLGFG----IAPKILIAVLIAFFPVVISMVT 167

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A   +  +++++     W+ +  I  P   P+  +G   A   A   ++V E     
Sbjct: 168 GLKAVDPEMLQLSATMGAKPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVG-- 225

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  GLG  I ++      P +  G+L+M    + L
Sbjct: 226 ----ANEGLGYVILQANGNLDTPMLFAGLLVMSLIGVVL 260



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           I+   VP     +  +T     L Q+   TT   L   VI++    + A +   S  +  
Sbjct: 58  IEPYLVPSPGATLDVLTSKTGYLWQHTWVTTYETLLGFVIAVAVGVLAAVVMVYSSTVER 117

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L PIL   Q +P +      VV+       K++ A L A F         +  SM   L
Sbjct: 118 TLYPILLFAQVVPKIAIAPLFVVWLGFGIAPKILIAVLIAFF--------PVVISMVTGL 169

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  ++ ++S +     WQ F  +  P S+P L   + ++++      V  E +   + 
Sbjct: 170 KAVDPEMLQLSATMGAKPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVGANE- 228

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIVWS 267
                G+G  I  A    D   +   +L M     V+F+  ++  + ++ W 
Sbjct: 229 -----GLGYVILQANGNLDTPMLFAGLLVMSLIGVVLFVVVEIAEKLLLPWH 275


>gi|154247682|ref|YP_001418640.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161767|gb|ABS68983.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 256

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 13/211 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    +T++  +    IA +  I +G+ +G+   I   + P      + P     P
Sbjct: 49  WWPLLKNSFVTLWTTMAGFAIAVVFGIALGMVVGWSRTIYRGLYPVMIGFNSVPKVAVVP 108

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++           +   L     + + I+ NV  G +    + ++V  +   +     R
Sbjct: 109 ILIMWFGIG----EIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMR 164

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + +P   PY           A+  ++VSE            G+G  + ++      P V
Sbjct: 165 KVGIPRTGPYLFGALKVGITLAFVGAVVSETIG------ANAGVGHLMVQAGSNFQMPLV 218

Query: 556 VLGVLIMCCFVLALNRFLW---HPLYLYGTR 583
             G+L +    + +          +  +  R
Sbjct: 219 FAGLLALAVEGILMYAIFAAFERRMVAWAFR 249



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 19/263 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
             +  I P  F +  FV+      +          P DI   +        L + +  T 
Sbjct: 3   LSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAM--GKYWWPLLKNSFVTL 60

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
              ++   I+++F      +   SR +   L P++    S+P +  +   +++F      
Sbjct: 61  WTTMAGFAIAVVFGIALGMVVGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIG--- 117

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E+ AI   F    + +  ++   L     +LE+V R+   S       +G+P + 
Sbjct: 118 -----EIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTG 172

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L   + + ++  +   V SE I          G+G  +  A     +  +   +L + 
Sbjct: 173 PYLFGALKVGITLAFVGAVVSETIGANA------GVGHLMVQAGSNFQMPLVFAGLLALA 226

Query: 250 GVIFLYDQLLF---RPMIVWSNK 269
               L   +     R M+ W+ +
Sbjct: 227 VEGILMYAIFAAFERRMVAWAFR 249


>gi|328914925|gb|AEB55758.1| ABC transporter permease [Chlamydophila psittaci 6BC]
          Length = 630

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +     L    +    +L P   ++Q  P+       V++F             A I   
Sbjct: 92  SIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL--------NAVIVPT 143

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +T ++YQ + + P +L E     + +  Q F  L +P ++P +   + ++M  
Sbjct: 144 ALTVFFPLTITIYQGITSTPEELLEQFILHQATKQQIFIKLRLPHALPHIFSGLKIAMGS 203

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFR 261
             F  +A E +          G+G  I  + +  D+      +  +  + F L+  +L  
Sbjct: 204 AGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAGLFALTLLTFTLFQSILLI 257

Query: 262 PMIVWSNKFRLERTTGIYP 280
             + ++  FR+E+TT  Y 
Sbjct: 258 EKLTFA-LFRIEKTTKKYR 275



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +    C T+  ++    +A ++ I + I +         + PF  L+   P     PL+V
Sbjct: 70  IFSSSCYTLQGILGGFFLALLLSIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIV 129

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      +  +L + F     +   +  G ++ P +  E       T  + +  + 
Sbjct: 130 LWFGWGLNAVIVPTALTVFF----PLTITIYQGITSTPEELLEQFILHQATKQQIFIKLR 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+  +G   A G A  A+I  E  +        +GLG  I ES           G
Sbjct: 186 LPHALPHIFSGLKIAMGSAGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAG 239

Query: 559 VLIMCCFVLAL 569
           +  +      L
Sbjct: 240 LFALTLLTFTL 250


>gi|294627378|ref|ZP_06705963.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598333|gb|EFF42485.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 489

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L Q+       +  ++  +LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGVTPASETDSRLTRLLQHTREHLALVGISLGFALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 369 IVRNTHAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 422

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I  +I+  DL  IL   +    V+ L  Q LF  +  W+
Sbjct: 423 VGTATLG-ALIGAGGYGQPILTSIRLDDLGLILEGAIP-AAVLALLVQALFEGVERWA 478



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 11/164 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++                 +   +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG S+ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 434

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G       G G  I  S        ++ G +      L +    
Sbjct: 435 G-------GYGQPILTSIRLDDLGLILEGAIPAAVLALLVQALF 471


>gi|78486128|ref|YP_392053.1| binding-protein dependent transport system inner membrane protein
           [Thiomicrospira crunogena XCL-2]
 gi|78364414|gb|ABB42379.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Thiomicrospira crunogena XCL-2]
          Length = 326

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +      + +  +P+G+  G     S  I+PF +     PA  F  L V+ +  Y 
Sbjct: 135 SIQIIAWGFFWSMVFGLPLGLLAGTYDSASRLIEPFTEFFRYLPAPAFGALAVAILGIYD 194

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  GT + ++               E + +    G    R +I+PG+ P 
Sbjct: 195 APK----ISIIFIGTFFQMVLISANTTRKLNMALIEASLTLGCKGISMIRQVIIPGVLPD 250

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                    G AW   IV+E+         ++G+  +I +     +F  V   
Sbjct: 251 LYRDMRILLGWAWTYLIVAELIG------TSSGITWFITQQARYKNFDNVFAA 297



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    +   +      S++F      LA        ++ P  +  + +P   F    V  
Sbjct: 130 ESLGHSIQIIAWGFFWSMVFGLPLGLLAGTYDSASRLIEPFTEFFRYLPAPAFGALAVAI 189

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                  K        I  IF    + M      +   +   L E S +    G      
Sbjct: 190 LGIYDAPK--------ISIIFIGTFFQMVLISANTTRKLNMALIEASLTLGCKGISMIRQ 241

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P  +P L  +M + +   W +++ +E+I          GI  +I    + ++   + 
Sbjct: 242 VIIPGVLPDLYRDMRILLGWAWTYLIVAELIGTSS------GITWFITQQARYKNFDNVF 295

Query: 243 YAMLTMLGVIFLYDQLLFR---PMIVWS 267
            A+L +  +  + D +L R    +  W 
Sbjct: 296 AAILIIGFIGIITDMILARIGKRLFPWH 323


>gi|83943260|ref|ZP_00955720.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
 gi|83846268|gb|EAP84145.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
          Length = 257

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 19/251 (7%)

Query: 23  LAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           LA +L +G+    +LL       +P              +L + A  TT+ +L  ++I  
Sbjct: 8   LAILLGLGLWQAAVLLTDAPHYILPSPWRVAQAAYRARETLIENAWVTTVEVLLGLLIGT 67

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V A   A S+    +L+P+L   Q++P+        ++F      K++ A L   F
Sbjct: 68  ALGAVTAIHLALSKTAERLLLPLLVFTQAVPVFALAPLLTLWFGYGMGSKIVMAVLIIYF 127

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +T + +  L  +P    ++++S      +   Y+ +P ++P L   + ++ 
Sbjct: 128 --------PVTSAFHDGLTRVPDGYRDLAQSMGTRPLRFMRYVQIPHALPSLATGLRLA- 178

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQ 257
                 V A    V+G+ V    G+G  + LA     +  +  A++ +  +  L      
Sbjct: 179 -----AVYAPIGAVIGEWVGASKGLGYLMLLANGRAKIDLMFAALIMLACLTVLLHLSVG 233

Query: 258 LLFRPMIVWSN 268
           LL + +  ++ 
Sbjct: 234 LLAQRLTRYAE 244



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 13/203 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   V++ ++I + +     I +         + P      A P     PL+     Y 
Sbjct: 54  VTTVEVLLGLLIGTALGAVTAIHLALSKTAERLLLPLLVFTQAVPVFALAPLLTLWFGYG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +   L++ F     +      G +  P+ ++++A S      R+ RY+ +P   P
Sbjct: 114 MGSKIVMAVLIIYF----PVTSAFHDGLTRVPDGYRDLAQSMGTRPLRFMRYVQIPHALP 169

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   A   +++ E          + GLG  +  +  +     +   ++++ C
Sbjct: 170 SLATGLRLAAVYAPIGAVIGEWVG------ASKGLGYLMLLANGRAKIDLMFAALIMLAC 223

Query: 565 FVLAL---NRFLWHPLYLYGTRC 584
             + L      L   L  Y    
Sbjct: 224 LTVLLHLSVGLLAQRLTRYAEGR 246


>gi|296156915|ref|ZP_06839752.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295892801|gb|EFG72582.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 314

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 91/234 (38%), Gaps = 16/234 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F + + +  +++  +    +    + I  + + V  +   A  T   +++A+V   +   
Sbjct: 54  FPIFVLVCALVVWRVAGKAIAAFTL-IGLVVIAVLGVWSDAITTIALIVTAIVFCAVIGI 112

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                 A+S R+  ++ PILDIMQ+ P   +L   V+ F     G V G       A+  
Sbjct: 113 PVGVACARSERVWRIVQPILDIMQTTPTFVYLVPVVMLFGV---GTVPGE-----VAVVI 164

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           + +  +       +  +  +L E   +F     Q  W + +P ++P ++  +  ++    
Sbjct: 165 AAMPPLIRFTNLGIRMVDHELVEAGLAFGADRRQLLWEVQLPLAVPTILGGLNQTVLTAM 224

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              V   MI          G+G  +   +   D+       + ++ +  + D++
Sbjct: 225 VMSVVISMI-------GAEGLGLVVLQGLGRLDVGQAAIGGIAIVLLAMMLDRV 271



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 16/260 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              L +        +      +     L    F +   V   + W+  G  +  FT   +
Sbjct: 22  WIALNLRPIFLVIKWPIQKLLEANIDALHAVPFPIFVLVCALVVWRVAGKAIAAFTLIGL 81

Query: 377 LYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           + +  LG       T+  +V  I+  ++I IPVG+       +   +QP   ++   P  
Sbjct: 82  VVIAVLGVWSDAITTIALIVTAIVFCAVIGIPVGVACARSERVWRIVQPILDIMQTTPTF 141

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V+   VV       +   +     ++      ++     G     ++  E   +F     
Sbjct: 142 VYLVPVVMLFGVGTVPGEVA----VVIAAMPPLIRFTNLGIRMVDHELVEAGLAFGADRR 197

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP   P  + G       A   S+V  +           GLG  + +   +  
Sbjct: 198 QLLWEVQLPLAVPTILGGLNQTVLTAMVMSVVISMIG-------AEGLGLVVLQGLGRLD 250

Query: 552 FPEVVLGVLIMCCFVLALNR 571
             +  +G + +    + L+R
Sbjct: 251 VGQAAIGGIAIVLLAMMLDR 270


>gi|110634871|ref|YP_675079.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285855|gb|ABG63914.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 314

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 18/231 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           ++ IL   +      R I     I L       +   A  T   + +A+    L      
Sbjct: 56  LVVILFTALAYMLASRKIAIFTAIVLVLVAAMGVWDPAMTTLSLITTAIFFCALIGLPVG 115

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
              A+S R   ++ PILDIMQ+ P   +L   V+ F        +   +AA+  +     
Sbjct: 116 IWCARSDRAWSIVRPILDIMQTTPTFVYLVPVVMLFGVGTVPGQVAVVVAAVPPLIRF-- 173

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                     +  + R++ E   +F  S  Q  W + +P ++P ++  +  ++       
Sbjct: 174 ------TNLGIRMVDREIVEAGIAFGASSRQLLWEIQIPMAIPTILGGLNQTVLTAMVMS 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V   MI          G+G  +   I   D+   +   + ++ +  + D++
Sbjct: 228 VVVAMI-------GAEGLGLVVLQGIGRLDVGRAVIGGIAIVLLAMMLDRI 271



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  +   I   ++I +PVGIW        S ++P   ++   P  V+   VV    
Sbjct: 93  AMTTLSLITTAIFFCALIGLPVGIWCARSDRAWSIVRPILDIMQTTPTFVYLVPVVMLFG 152

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +   + + +         ++     G      +  E   +F  +  +    I +P  
Sbjct: 153 VGTVPGQVAVVVAA----VPPLIRFTNLGIRMVDREIVEAGIAFGASSRQLLWEIQIPMA 208

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G       A   S+V  +           GLG  + +   +      V+G + +
Sbjct: 209 IPTILGGLNQTVLTAMVMSVVVAMIG-------AEGLGLVVLQGIGRLDVGRAVIGGIAI 261

Query: 563 CCFVLALNRF 572
               + L+R 
Sbjct: 262 VLLAMMLDRI 271


>gi|319947241|ref|ZP_08021474.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus australis
           ATCC 700641]
 gi|319746483|gb|EFV98743.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus australis
           ATCC 700641]
          Length = 505

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 26/197 (13%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++  +   A   +  +R    ++ +  I Q+IP +  L         L+   +    L A
Sbjct: 33  AIFLSVPLAIYLSTRKRASNWVLQLAGIFQTIPSMALL--------GLFIPIMGIGTLPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +  +    L  I   LEE   +F ++ W++     +P +MP ++  +  
Sbjct: 85  LTALVIYAIFPILQNTITGLQGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIMSGIR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ MI+   T   +I   G+GS+I L I   +   IL   L+   +   +
Sbjct: 144 ---------TAAVMIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAFLAIAF 194

Query: 256 DQLLFRPMIVWSNKFRL 272
           + LL      W  K +L
Sbjct: 195 NLLL-----KWMEKAKL 206



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  + +P+ I++  R   S+ +   A +    P+     L +  +    L     L +  
Sbjct: 33  AIFLSVPLAIYLSTRKRASNWVLQLAGIFQTIPSMALLGLFIPIMGIGTLPALTALVIYA 92

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           IF     IL N I G        +E   +F +T W   +   +P   P  ++G  TA   
Sbjct: 93  IF----PILQNTITGLQGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIMSGIRTAAVM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 149 IIGTATLAALIGAG-------GLGSFILLGIDRNNASLILIGALSSAFLAIAFNLLL 198


>gi|182434722|ref|YP_001822441.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178463238|dbj|BAG17758.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 287

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T +  ++  IIA  + +   + + +   +   + P        P     PL V  + + 
Sbjct: 86  VTTYETLLGFIIAVAVGVLAAVVMVYSSTVERTLYPILLFAQVVPKIAIAPLFVVWLGFG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L+ +    + ++ +++ G  A   +  +++++     W+ +  I  P   P
Sbjct: 146 ----IAPKILIAVLIAFFPVVISMVTGLKAVDPEMLQLSATMGAKPWQTFVKIRFPASLP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +G   A   A   ++V E            GLG  I ++      P +  G+L+M  
Sbjct: 202 HLFSGLKVAVTLAVTGAVVGEFVG------ANEGLGYVILQANGNLDTPMLFAGLLVMSL 255

Query: 565 FVLAL 569
             + L
Sbjct: 256 IGVVL 260



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           I+   VP     +  +T     L Q+   TT   L   +I++    + A +   S  +  
Sbjct: 58  IEPYLVPSPGATLDVLTSKTGYLWQHTWVTTYETLLGFIIAVAVGVLAAVVMVYSSTVER 117

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L PIL   Q +P +      VV+       K++ A L A F         +  SM   L
Sbjct: 118 TLYPILLFAQVVPKIAIAPLFVVWLGFGIAPKILIAVLIAFF--------PVVISMVTGL 169

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  ++ ++S +     WQ F  +  P S+P L   + ++++      V  E +   + 
Sbjct: 170 KAVDPEMLQLSATMGAKPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVGANE- 228

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIVWS 267
                G+G  I  A    D   +   +L M     V+F+  ++  + ++ W 
Sbjct: 229 -----GLGYVILQANGNLDTPMLFAGLLVMSLIGVVLFVVVEIAEKLLLPWH 275


>gi|15807190|ref|NP_295919.1| ABC transporter permease [Deinococcus radiodurans R1]
 gi|6460000|gb|AAF11746.1|AE002053_1 ABC transporter, permease protein, CysTW family [Deinococcus
           radiodurans R1]
          Length = 276

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 81/201 (40%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+L+  V ++    V   L      L   L   L  +QS+P + F+ F
Sbjct: 72  GKLLAAIGGSLRRVLTGYVAAVALGGVIGLLMGAWLPLRATLGAYLTGLQSVPSIAFVPF 131

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E A +  +       +  ++  +L N+P  L    R+   +G +
Sbjct: 132 AILFFGLN--------ERAVLAVVILEGFIPVALAVSGALLNVPPTLRTAGRTLGANGLE 183

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  +  + S  W  +V  E+++ G        +G  + +     ++
Sbjct: 184 LLLRVSLPAALPNVLSGLRTAWSFAWRALVGGELLIAGAKS-----LGEQLEIGRNTANV 238

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  +L +  +  ++D LL
Sbjct: 239 ALVLSTILIIGVIGGVFDALL 259



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G  W  I Y +     QD   +  +G  ++ RV+   + A  +   +G+ +G    + + 
Sbjct: 54  GAVWTEISYGLWGTGPQDGKLLAAIGG-SLRRVLTGYVAAVALGGVIGLLMGAWLPLRAT 112

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  +   L + P+  F P  +             +  ++I      +   V       P 
Sbjct: 113 LGAYLTGLQSVPSIAFVPFAILFFGL----NERAVLAVVILEGFIPVALAVSGALLNVPP 168

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +    +    G      + LP   P  ++G  TA   AW A +  E+   G       
Sbjct: 169 TLRTAGRTLGANGLELLLRVSLPAALPNVLSGLRTAWSFAWRALVGGELLIAGAKS---- 224

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            LG  +       +   V+  +LI+       +  L
Sbjct: 225 -LGEQLEIGRNTANVALVLSTILIIGVIGGVFDALL 259


>gi|115359066|ref|YP_776204.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284354|gb|ABI89870.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 316

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 15/205 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + + V  +   A  T   +++A+    +         A+S R+  V+ PILDIMQ+ P  
Sbjct: 82  LAIAVLGVWSDAMTTLALIVTAIAFCAVIGIPIGIACARSERVWRVVQPILDIMQTTPTF 141

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +L   V+ F            ++   A+ T+ +  +       +  +  +L E   +F 
Sbjct: 142 VYLVPVVMLFGVG--------TVSGEVAVVTAAMPPLIRFTNLGIRMVDHELVEAGLAFG 193

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               Q  W + +P ++  ++  +  ++       V   MI          G+G  +   +
Sbjct: 194 ADRRQLLWEVQLPLAVSTILGGLNQTVLTAMVMSVVISMI-------GAEGLGLVVLQGL 246

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL 258
              D+       + ++ +  + D++
Sbjct: 247 GRLDVGQAAIGGVAIVMLAMMLDRV 271



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 16/264 (6%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
                  L +        +      +     L    F + C V   +AW+  G  +  FT
Sbjct: 18  AAVQWIALHLRPLFLVIKWPIQKLLEANIDALHAVPFPLFCLVCALLAWRFAGRAIGAFT 77

Query: 373 YQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              +L +  LG       T+  +V  I   ++I IP+GI       +   +QP   ++  
Sbjct: 78  LLGLLAIAVLGVWSDAMTTLALIVTAIAFCAVIGIPIGIACARSERVWRVVQPILDIMQT 137

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V+   VV       ++  +     ++      ++     G     ++  E   +F 
Sbjct: 138 TPTFVYLVPVVMLFGVGTVSGEVA----VVTAAMPPLIRFTNLGIRMVDHELVEAGLAFG 193

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
               +    + LP      + G       A   S+V  +           GLG  + +  
Sbjct: 194 ADRRQLLWEVQLPLAVSTILGGLNQTVLTAMVMSVVISMIG-------AEGLGLVVLQGL 246

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
            +    +  +G + +    + L+R
Sbjct: 247 GRLDVGQAAIGGVAIVMLAMMLDR 270


>gi|34557298|ref|NP_907113.1| hypothetical protein WS0908 [Wolinella succinogenes DSM 1740]
 gi|34483014|emb|CAE10013.1| ABCB PROTEIN [Wolinella succinogenes]
          Length = 260

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 105/249 (42%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   + +  +   L+G      P +  + + + L    + ++ S T  R L  ++ISL  
Sbjct: 25  ILLFVALWNVAHQLYGSLILPSPLETFEKLTLLLGDPRIQEHLSLTLHRALKGLLISLAL 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   LA   +   ++  PI+ I+  IP + ++   +++F           E   +F I
Sbjct: 85  GSLLGFLAGLFKTASLLARPIVTILVGIPPIAWIVLAMIWFGLG--------EGTVLFTI 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +     +    I  + +E+  +F LS  QK ++L +P     L  + + ++  
Sbjct: 137 IIASFPIVFVGALEGSRAIEGESQEMCDAFSLSWIQKLFHLYIPHLFSYLFPSYIAALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  V+ +E++   D      GIG+ +A+A    + +  L  +  M+G + + + L+  P
Sbjct: 197 SWKIVIMAELLSSSD------GIGAELAIARSHLETITALALVCMMVGTLLIIEYLILEP 250

Query: 263 MIVWSNKFR 271
           +      +R
Sbjct: 251 IKREVQSWR 259



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 84/253 (33%), Gaps = 12/253 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             P        +     +    W          I    +              +     +
Sbjct: 10  ELPWTLWSGWGSVASILLFVALWNVAHQLYGSLILPSPLETFEKLTLLLGDPRIQEHLSL 69

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R +  ++I+  +   +G   G     S   +P   +L   P   +  L +       
Sbjct: 70  TLHRALKGLLISLALGSLLGFLAGLFKTASLLARPIVTILVGIPPIAWIVLAMIWFGLGE 129

Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                   L  I    + I+F   + G+ A   + +E+  +F ++  +   ++ +P +F 
Sbjct: 130 GT-----VLFTIIIASFPIVFVGALEGSRAIEGESQEMCDAFSLSWIQKLFHLYIPHLFS 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y     I A G +W   I++E+ S       + G+GA +A +         +  V +M  
Sbjct: 185 YLFPSYIAALGMSWKIVIMAELLS------SSDGIGAELAIARSHLETITALALVCMMVG 238

Query: 565 FVLALNRFLWHPL 577
            +L +   +  P+
Sbjct: 239 TLLIIEYLILEPI 251


>gi|222102602|ref|YP_002539641.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739203|gb|ACM39936.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 285

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 99/242 (40%), Gaps = 18/242 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAM 76
            + +   L    + ++   +    V   +       L    +  L + + +T   +  ++
Sbjct: 43  IETILLFLPFYAVILITVALAAVFVTLRVAVTSAFALSFCFLSGLWEASMQTLALVTVSV 102

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            IS+L  F    LA++ RR+  ++ P+LDIMQ++P   +L   V+ F            +
Sbjct: 103 CISVLIAFPLGILASRHRRVETIIRPLLDIMQTVPPWVYLIPAVMIFSLG--------RV 154

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            AI A     +  M      +   +P+DL E+ ++   S     + + +P + P L+  +
Sbjct: 155 PAIIATIVYGIPPMLRLTTLAFNQVPKDLLELGQATGASPRAILFKIEIPAATPTLLVGL 214

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                     ++ S  IVV   ++   G+G+ +   +   ++   L A L ++ V    D
Sbjct: 215 NQ-------CILLSLAIVVLAGLVGAGGLGAEVTRGLTRMEMGLGLRAGLAIVAVAIFLD 267

Query: 257 QL 258
           +L
Sbjct: 268 RL 269



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 4/213 (1%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           + +S   + +P  + +               E  L       +           V   A+
Sbjct: 6   VWFSPGAYLAPAVDWLNANFHPFFNTVTKIIEAVLGSIETILLFLPFYAVILITVALAAV 65

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +  +         ++  +  +      T+  V V + I+ +I  P+GI       + + 
Sbjct: 66  FVTLRVAVTSAFALSFCFLSGLWEASMQTLALVTVSVCISVLIAFPLGILASRHRRVETI 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I+P   ++   P  V+    V   S   +   +   +  I      +L       +  P 
Sbjct: 126 IRPLLDIMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI----PPMLRLTTLAFNQVPK 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           D  E+  +   +       I +P   P  + G 
Sbjct: 182 DLLELGQATGASPRAILFKIEIPAATPTLLVGL 214


>gi|322832883|ref|YP_004212910.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168084|gb|ADW73783.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 269

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 12/230 (5%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLG 383
             P   + +     +  +L + W       AI      +     +   +      +    
Sbjct: 15  RLPSRKVFVGIAVTLFVILFLAWGLATRSGAIPPIFLPKLTDVWLKMVSLAQDGTLWSDI 74

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++R+ +   I+S++ I +G+  G      +  +P    +   P   F PL +     
Sbjct: 75  KSSLYRISIAFAISSVMSIVIGVLAGCYGFFKALTEPLVDFIRYMPVVAFVPLTILWTG- 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                ++   L++  GT +  +  VI      P DF  +  +  +   +    I+LPG  
Sbjct: 134 ---TDDVQKFLIIWIGTFFQQVLMVIDAVKRVPGDFVGLGRTLGMPDRKILFRIVLPGAL 190

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           P        + G AW   +++E+ +       T+GLG  I  S       
Sbjct: 191 PGIWDALRISLGWAWTWLVLAELVA------STSGLGYRIVVSQRFFQTD 234



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 101/253 (39%), Gaps = 23/253 (9%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITLDV------HSLPQYAS 66
            P+    +   + + +I  L  G+        P  +  +  + L +       +L     
Sbjct: 16  LPSRKVFVGIAVTLFVILFLAWGLATRSGAIPPIFLPKLTDVWLKMVSLAQDGTLWSDIK 75

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R+  A  IS + + V   LA        +  P++D ++ +P++ F+  T+++    
Sbjct: 76  SSLYRISIAFAISSVMSIVIGVLAGCYGFFKALTEPLVDFIRYMPVVAFVPLTILWTGTD 135

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   ++     I+    +     +  ++  +P D   + R+  +   +  + + +P
Sbjct: 136 --------DVQKFLIIWIGTFFQQVLMVIDAVKRVPGDFVGLGRTLGMPDRKILFRIVLP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++PG+   + +S+   W ++V +E++          G+G  I ++ +      I+  +L
Sbjct: 188 GALPGIWDALRISLGWAWTWLVLAELVA------STSGLGYRIVVSQRFFQTDTIIGYIL 241

Query: 247 TMLGVIFLYDQLL 259
            +  +  + DQ++
Sbjct: 242 LLGILGLISDQIM 254


>gi|228908673|ref|ZP_04072510.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis IBL 200]
 gi|228851014|gb|EEM95831.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis IBL 200]
          Length = 282

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|294667621|ref|ZP_06732835.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602616|gb|EFF46053.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 489

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L Q+       +  ++  +LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGVTPASETDSRLTRLLQHTREHLALVGISLGFALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 369 IVRNTHAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 422

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  DL  IL   +    V+ L  Q LF  +  W+
Sbjct: 423 VGTATLG-ALIGAGGYGQPILTGIRLDDLGLILEGAIP-AAVLALLVQALFEGVERWA 478



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 48/164 (29%), Gaps = 11/164 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++                 +   +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG S+ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 434

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G       G G  I           ++ G +      L +    
Sbjct: 435 G-------GYGQPILTGIRLDDLGLILEGAIPAAVLALLVQALF 471


>gi|228953251|ref|ZP_04115305.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229080103|ref|ZP_04212631.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock4-2]
 gi|229179202|ref|ZP_04306556.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 172560W]
 gi|228604100|gb|EEK61567.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus 172560W]
 gi|228703227|gb|EEL55685.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus Rock4-2]
 gi|228806478|gb|EEM53043.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 282

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|229191017|ref|ZP_04318007.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus ATCC 10876]
 gi|228592415|gb|EEK50244.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus ATCC 10876]
          Length = 282

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 348 WFCVVC--GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           W        V+  +    +   +          +     I++FR      I   + I +G
Sbjct: 45  WQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILG 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +GF       + P  Q+L   P     PL V    +   +      LL+  G  + + 
Sbjct: 105 TIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFFPLY 160

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G     +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E
Sbjct: 161 VNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 221 LMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 262



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 37/246 (15%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGGLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + +++++P L      V++F      KV+     A F         +  + +  +  +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++        
Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMG------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT-------------MLGVIFLYDQLLFRPMIVWSN 268
             GIG  I  A +  +   +   ++              +L V            + W +
Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEV----------KFLRWRD 274

Query: 269 KFRLER 274
            F+ E 
Sbjct: 275 NFKGET 280


>gi|262198259|ref|YP_003269468.1| binding-protein-dependent transporters inner membrane component
           [Haliangium ochraceum DSM 14365]
 gi|262081606|gb|ACY17575.1| binding-protein-dependent transport systems inner membrane
           component [Haliangium ochraceum DSM 14365]
          Length = 259

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 99/259 (38%), Gaps = 15/259 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           Y  LP    +    +   +L  + +  ++  + L        P D +      L   +L 
Sbjct: 5   YLALPVAGPKATLLSASGILGLIALWFLLPTLGLVKSAFIPTPVDTLGAFWTMLSDGTLL 64

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +  R+L ++ +S +             R+  VL  I+   ++ PI+ F+   ++ 
Sbjct: 65  SDGWPSVRRVLLSVSMSAVVGIPIGIAMGAFGRVEAVLKWIIFPFRTAPIVAFIPIFMLI 124

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F           E   ++ +F   V  +    + ++  +P +  + +  +  S     W+
Sbjct: 125 FGIE--------EEMKVWFLFFGTVVYIIPLTFDAIRAVPHEYVDAAVDYGFSPLGSLWH 176

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             +P + P +   + +     W ++VA+E+I V D      G+G  +  A + Q+   + 
Sbjct: 177 FIIPAAWPRIFDAIKVCTGIAWTYLVAAEIINVTD------GLGKVVQQAQRFQNTPKVW 230

Query: 243 YAMLTMLGVIFLYDQLLFR 261
             +L +L +  + D  L +
Sbjct: 231 AGILLILLIGNITDFALGK 249



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 84/229 (36%), Gaps = 10/229 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                L ++  +  +   F    +  V        +  +   +T      ++  G  ++ 
Sbjct: 13  PKATLLSASGILGLIALWFLLPTLGLVKSAFIPTPVDTLGAFWTMLSDGTLLSDGWPSVR 72

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV++ + +++++ IP+GI +G    + + ++         P   F P+ +          
Sbjct: 73  RVLLSVSMSAVVGIPIGIAMGAFGRVEAVLKWIIFPFRTAPIVAFIPIFMLIFGIE---- 128

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  + FGT  YI+        A P+++ + A  +  +      + I+P  +P    
Sbjct: 129 EEMKVWFLFFGTVVYIIPLTFDAIRAVPHEYVDAAVDYGFSPLGSLWHFIIPAAWPRIFD 188

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                 G AW   + +E+ +       T GLG  + ++    + P+V  
Sbjct: 189 AIKVCTGIAWTYLVAAEIIN------VTDGLGKVVQQAQRFQNTPKVWA 231


>gi|210631765|ref|ZP_03297007.1| hypothetical protein COLSTE_00892 [Collinsella stercoris DSM 13279]
 gi|210159885|gb|EEA90856.1| hypothetical protein COLSTE_00892 [Collinsella stercoris DSM 13279]
          Length = 260

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 95/259 (36%), Gaps = 18/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGI-INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RI   ++  ++ +  + + + +          P ++           +L  +   +  R+
Sbjct: 12  RIPNGVWMAISLLCAVALWLFVSAELPAVFAPPAEVWAAFVERATGGTLWAHTWASLSRV 71

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   ++ + +   A L A       ++ P +  +++IP L ++   + +       K  
Sbjct: 72  LTGFGLAFVTSIPVAFLMAWYDPFRHIIEPWIQFIRNIPPLAYVFLLIAWLGIGNESK-- 129

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +  IF +       ++YQ +  +   L + +R         F+ + +P + P +
Sbjct: 130 ------VAVIFIASFLVQVVTIYQGIKGVDTTLIKAARVLGAKQSDIFFKVTIPATTPFI 183

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    + +S     ++ASE++          G+G  I  A     +  +L  ++ +  + 
Sbjct: 184 LVAARLGLSTSLTTLMASEIVGG------DRGLGMMIQQASGYYQMDVVLLGIIMLGIIG 237

Query: 253 FLY---DQLLFRPMIVWSN 268
            L+    + L R    W  
Sbjct: 238 ILFEKIVRFLERRFTGWQE 256



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 68/202 (33%), Gaps = 13/202 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RV+    +A +  IPV   + +       I+P+ Q +   P   +  L+++ +   
Sbjct: 66  ASLSRVLTGFGLAFVTSIPVAFLMAWYDPFRHIIEPWIQFIRNIPPLAYVFLLIAWLGIG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               N     ++   +    +  +  G         + A          +  + +P   P
Sbjct: 126 ----NESKVAVIFIASFLVQVVTIYQGIKGVDTTLIKAARVLGAKQSDIFFKVTIPATTP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + +  A      +    + SE+           GLG  I +++       V+LG++++  
Sbjct: 182 FILVAARLGLSTSLTTLMASEIVGGD------RGLGMMIQQASGYYQMDVVLLGIIMLGI 235

Query: 565 FVLALN---RFLWHPLYLYGTR 583
             +      RFL      +   
Sbjct: 236 IGILFEKIVRFLERRFTGWQET 257


>gi|327489209|gb|EGF21002.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1058]
          Length = 506

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|256376748|ref|YP_003100408.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255921051|gb|ACU36562.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 288

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 99/256 (38%), Gaps = 16/256 (6%)

Query: 17  PNIFD-LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           P ++  L   ++V+G +           +P        +T D       A  T    +  
Sbjct: 38  PKVWSPLAVMLVVLGFVWERTAETMPYLLPHLNKVGAALTKDPAKFFDNAWWTLQEAMVG 97

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++I     FV A L ++       ++PI  ++   P++      VV F      K+I   
Sbjct: 98  LLIGFTAAFVLAVLTSEWGVARRAVMPIAVVLNVTPLVAIAPVLVVAFGFGPEPKLIVTA 157

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L   F         +  ++   L ++P  + +V ++ R S W+  W + +P ++P +   
Sbjct: 158 LICFFT--------LLINISTGLRSVPPAVLQVYQTVRASRWEMLWRIRIPNALPYIFAG 209

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVI 252
           + ++        V +EM   G ++    G+G+ I+++     L  +  ++     M  ++
Sbjct: 210 LRIAFPLSIVGAVVAEMSAPGASL----GLGTIISISSSMNRLDMVFASITILAVMGSLL 265

Query: 253 FLYDQLLFRPMIVWSN 268
            L    + R ++ W  
Sbjct: 266 LLVVTTVERKVLHWHE 281



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 81/243 (33%), Gaps = 14/243 (5%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCIT 386
           +L +         +    VV G       +++ Y++ H         +D          T
Sbjct: 31  KLKAALHPKVWSPLAVMLVVLGFVWERTAETMPYLLPHLNKVGAALTKDPAKFFDNAWWT 90

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +V ++I       + +           + P A +L   P     P++V    +   
Sbjct: 91  LQEAMVGLLIGFTAAFVLAVLTSEWGVARRAVMPIAVVLNVTPLVAIAPVLVVAFGFGP- 149

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  ++      + +L N+  G  + P    +V  +   + W     I +P   PY 
Sbjct: 150 ---EPKLIVTALICFFTLLINISTGLRSVPPAVLQVYQTVRASRWEMLWRIRIPNALPYI 206

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   +   ++V+E+++ G     + GLG  I+ S+       V   + I+    
Sbjct: 207 FAGLRIAFPLSIVGAVVAEMSAPG----ASLGLGTIISISSSMNRLDMVFASITILAVMG 262

Query: 567 LAL 569
             L
Sbjct: 263 SLL 265


>gi|158421648|ref|YP_001522940.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158328537|dbj|BAF86022.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 256

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W        I          +     Q    ++    +T++  V    +A +  I
Sbjct: 16  GLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTLWTTVAGFALAVVFGI 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G+   I   + P      + P     P+++           +   L     + +
Sbjct: 76  ALGLVVGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIG----EIPAILTAFLISFF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ NV  G +    + ++V  +   +     R + +P   PY       A   A+  ++
Sbjct: 132 PIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTAPYLFGSLKVAITLAFVGAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           VSE            G+G  + ++      P V  G+L +    + +
Sbjct: 192 VSETIG------ANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFM 232



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 84/215 (39%), Gaps = 17/215 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L + +  T    ++   ++++F      +   SR +   L P++    SIP +  + 
Sbjct: 49  WWPLLRNSFVTLWTTVAGFALAVVFGIALGLVVGWSRAIYRGLYPVMIGFNSIPKVAVVP 108

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F           E+ AI   F    + +  ++   L     +LE+V R+   S  
Sbjct: 109 ILIMWFGIG--------EIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL 160

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                +G+P + P L  ++ ++++  +   V SE I          G+G  +  A     
Sbjct: 161 DIMRKVGIPRTAPYLFGSLKVAITLAFVGAVVSETIGANA------GVGHLMVQAGSNFQ 214

Query: 238 LLAILYAMLTMLG-VIFLYDQL--LFRPMIVWSNK 269
           +  +   +L +    IF+Y     L R M  W+ +
Sbjct: 215 MPLVFAGLLALAVQGIFMYAVFAVLERRMAGWAFR 249


>gi|134293005|ref|YP_001116741.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|161521321|ref|YP_001584748.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189352511|ref|YP_001948138.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|134136162|gb|ABO57276.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|160345371|gb|ABX18456.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189336533|dbj|BAG45602.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|225421119|gb|ACN89828.1| OphG [Burkholderia cepacia]
          Length = 270

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 104/260 (40%), Gaps = 15/260 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            +RI   I      ++   + ++        ++P    D+     D  +L +    T   
Sbjct: 24  RKRIAGTIASFAVLLIGWQLFSLTQPSYVFPSLPHIAQDMASFAND-GTLWRATWATLKS 82

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++  + SL+   +        +R      P+L+  Q++P + +   ++++F        
Sbjct: 83  VVAGSIASLVVGTLAGFAL---KRHEAFFGPLLNFAQTVPYVVWALMSMIWFGL------ 133

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             ++ + IF IF +    + +++   L  I R L E++ S   +    F ++ +P   P 
Sbjct: 134 --SQASVIFTIFIAGFTIIAYNVSAGLHQIDRQLLEMAESVSANRLMTFRHITLPSLTPY 191

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LV      ++  W  VV +E+   G +   +      + +  +      +    + ++ +
Sbjct: 192 LVSGSRTMIAICWKIVVLAELFAGGASGGGIG---YNLYVGWEFNRTNEVFAWTVWLVVL 248

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
           + L D L+  P+  ++ +++
Sbjct: 249 MLLTDWLIIAPIDRFATRWK 268



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 10/256 (3%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
                ++        +L I W          +         +  ++ +   +      T+
Sbjct: 21  RAQRKRIAGTIASFAVLLIGWQLFSLTQPSYVFPSLPHIAQDMASFANDGTLWRATWATL 80

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             VV   I + ++    G  +       +   P        P  V+  + +        +
Sbjct: 81  KSVVAGSIASLVVGTLAGFAL---KRHEAFFGPLLNFAQTVPYVVWALMSMIWFGLSQAS 137

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +   +       I +NV AG         E+A S        +R+I LP + PY V
Sbjct: 138 ----VIFTIFIAGFTIIAYNVSAGLHQIDRQLLEMAESVSANRLMTFRHITLPSLTPYLV 193

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G+ T     W   +++E+ + G            +    E     EV    + +   +L
Sbjct: 194 SGSRTMIAICWKIVVLAELFAGGASGGGIG---YNLYVGWEFNRTNEVFAWTVWLVVLML 250

Query: 568 ALNRFLWHPLYLYGTR 583
             +  +  P+  + TR
Sbjct: 251 LTDWLIIAPIDRFATR 266


>gi|218678225|ref|ZP_03526122.1| ABC transporter, membrane spanning protein [Rhizobium etli CIAT
           894]
          Length = 222

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 15/201 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  L + + +T   +  ++ IS+L  F    LA++ R+    + P+LDIMQ++P   +L 
Sbjct: 22  LAGLWEASMQTLALVTVSVCISVLIAFPLGILASRYRKFEAAIRPVLDIMQTVPPWVYLI 81

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+ F            + AI A     V  M      +   +P+DL E+ ++   S  
Sbjct: 82  PAVMIFSLG--------RVPAIIATIVYGVPPMLRLTTLAFSQVPKDLLELGQATGASPR 133

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
              + + +P + P L+  +          ++ S  IVV   ++   G+G+ +   +   +
Sbjct: 134 AILFKIEIPAATPTLLVGLNQ-------CILLSLAIVVLAGLVGAGGLGAEVTRGLTRME 186

Query: 238 LLAILYAMLTMLGVIFLYDQL 258
           +   L A L ++ V    D+L
Sbjct: 187 MGLGLRAGLAIVAVAIFLDRL 207



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 4/125 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V V + I+ +I  P+GI         + I+P   ++   P  V+    V   S   
Sbjct: 32  TLALVTVSVCISVLIAFPLGILASRYRKFEAAIRPVLDIMQTVPPWVYLIPAVMIFSLGR 91

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +  I      +L       S  P D  E+  +   +       I +P   P 
Sbjct: 92  ----VPAIIATIVYGVPPMLRLTTLAFSQVPKDLLELGQATGASPRAILFKIEIPAATPT 147

Query: 506 YVTGA 510
            + G 
Sbjct: 148 LLVGL 152


>gi|113866498|ref|YP_724987.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525274|emb|CAJ91619.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 257

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +V   +A  + + +G+ +G    + +   P      A P   F P++V       
Sbjct: 66  TFWTTMVGFGVAIAVGVLLGLAMGSSRLLYAASYPLMTAFNALPKAAFVPILVVWFGLGA 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ N+  G +    + ++V              + LP   PY
Sbjct: 126 G----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRRDVLFKVGLPRAMPY 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+      +    G+G  +  +      P    G++++   
Sbjct: 182 FFASLKVAITLAFVGTTVSEM------NAANEGIGYLLVSAGSAMKMPLAFAGLVVIAVM 235

Query: 566 VLALNRFL 573
            +A+    
Sbjct: 236 AMAMYELF 243



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 86/238 (36%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +  G+ +  +P     +  +      +  +A RT    +    +++    +       SR
Sbjct: 33  MAFGVSDFILPTPSAIVASLVEYADVIAGHAWRTFWTTMVGFGVAIAVGVLLGLAMGSSR 92

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L     P++    ++P   F+   VV+F              AI   F    + +  ++
Sbjct: 93  LLYAASYPLMTAFNALPKAAFVPILVVWFGLGAGP--------AILTAFLISFFPIMVNI 144

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +  +LE+V R          + +G+P +MP    ++ ++++  +     SEM  
Sbjct: 145 ATGLATLEPELEDVLRVLGAKRRDVLFKVGLPRAMPYFFASLKVAITLAFVGTTVSEMNA 204

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
             +      GIG  +  A     +      ++ +  +     +L   + + M  W+++
Sbjct: 205 ANE------GIGYLLVSAGSAMKMPLAFAGLVVIAVMAMAMYELFAVVEKRMTGWAHR 256


>gi|257089104|ref|ZP_05583465.1| ABC transporter permease [Enterococcus faecalis CH188]
 gi|312904306|ref|ZP_07763468.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|256997916|gb|EEU84436.1| ABC transporter permease [Enterococcus faecalis CH188]
 gi|310632402|gb|EFQ15685.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0635]
 gi|315161990|gb|EFU06007.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0645]
 gi|315578748|gb|EFU90939.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0630]
          Length = 505

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|163792220|ref|ZP_02186197.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159181925|gb|EDP66434.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 271

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 14/202 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P +++  + +     +L  +   +  R+ S   +                      +
Sbjct: 57  APAPSEVLAALGVIAADGTLAVHLGASLGRIGSGWALGTATGLAAGLAMGMFSLARAAGL 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++  +  IP +  L   +++F    P KV    L   F            + + ++  +
Sbjct: 117 PVVSALFPIPKIALLPLLILWFGIGEPSKVATIALGTFF--------PTAIATFSAVDGV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR L  +++SF +   +  W + +P ++PG++    ++ S     VVA+EMI        
Sbjct: 169 PRSLIRMAQSFGVPAPRIVWSIVLPGALPGILAGFRITASIALILVVAAEMIG------A 222

Query: 222 LPGIGSYIALAIKEQDLLAILY 243
             GIG++I  A        +L 
Sbjct: 223 EFGIGAFILQAGNLMRTDQLLA 244



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 16/210 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   A      ++G I    T             ++ R+     + +   +  G+ 
Sbjct: 51  WISALMAPAPSEVLAALGVIAADGTLA------VHLGASLGRIGSGWALGTATGLAAGLA 104

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G      +   P    L   P     PL++        +    ++     GT +     
Sbjct: 105 MGMFSLARAAGLPVVSALFPIPKIALLPLLILWFGIGEPSKVATIA----LGTFFPTAIA 160

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             +     P     +A SF +   R    I+LPG  P  + G       A    + +E+ 
Sbjct: 161 TFSAVDGVPRSLIRMAQSFGVPAPRIVWSIVLPGALPGILAGFRITASIALILVVAAEMI 220

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                     G+GA+I ++       +++ 
Sbjct: 221 G------AEFGIGAFILQAGNLMRTDQLLA 244


>gi|91788145|ref|YP_549097.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91697370|gb|ABE44199.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 279

 Score = 91.5 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 10/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +      T+   V+   I +++ +  G+W+   P  S+ + P+ +   + P  
Sbjct: 68  GLPGNADIYLHLGTTLLETVLAFGIGTVLGLVCGLWLALAPTASAILDPYIKAANSMPRV 127

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           +  P+          +       L+ F     + FNV  G           A        
Sbjct: 128 ILAPIFALWFGLGIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGANHR 183

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R + LP    +  +   T+ G A+  ++V E            G+G  I ++     
Sbjct: 184 QLLRTVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFD 237

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V  G+ ++  F L L+  +
Sbjct: 238 VNTVFAGIAVLTAFALVLDGIV 259



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L  + A  I  +   V     A +     +L P +    S+P +       ++F
Sbjct: 78  HLGTTLLETVLAFGIGTVLGLVCGLWLALAPTASAILDPYIKAANSMPRVILAPIFALWF 137

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A     F +F        F++YQ +  +   +   +R    +  Q    +
Sbjct: 138 GLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANHRQLLRTV 189

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  +  
Sbjct: 190 YLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDVNTVFA 243

Query: 244 AMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            +  +     + D +   L + ++ W  +
Sbjct: 244 GIAVLTAFALVLDGIVGKLEKRLMKWQPR 272


>gi|319796043|ref|YP_004157683.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315598506|gb|ADU39572.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 268

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 89/252 (35%), Gaps = 6/252 (2%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
                      ++     +  +L   W  +V  + +        Y++      D   +  
Sbjct: 4   RTPLLNQPRVQRVLYPVLIGVVLVALWQWMVVAMELPSYLVPSPYLMMQTLVTDWAPLGN 63

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+   V+   +A++  + +         I + + P+A LL   P     PL++  V
Sbjct: 64  ALLVTLKITVLSFALATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWV 123

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                NP   +++       + I+ N   G  +   D +        T W+    + +P 
Sbjct: 124 K----NPVAAMTVCAALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPS 179

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             PY+  G   + G A   ++V+E  +         GL   I ++  + + P +   +L+
Sbjct: 180 ALPYFFGGLRISSGLALIGAVVAEFVAG--TGGSGAGLAYQILQAGFQLNIPRMFAALLL 237

Query: 562 MCCFVLALNRFL 573
           +    +AL   +
Sbjct: 238 ISLTGVALFVLM 249



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 92/247 (37%), Gaps = 11/247 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R+   +   +  V +   + + +  +    VP   + +  +  D   L      T    
Sbjct: 14  QRVLYPVLIGVVLVALWQWMVVAME-LPSYLVPSPYLMMQTLVTDWAPLGNALLVTLKIT 72

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + +  ++ +   + + L  +S+R+   L P   ++Q  PI+      +++  N      +
Sbjct: 73  VLSFALATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAAMTV 132

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L A+F I +        +    L +I  DL+   +  R + WQ+   L +P ++P  
Sbjct: 133 CAALVALFPIIS--------NTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYF 184

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S        V +E +          G+   I  A  + ++  +  A+L +    
Sbjct: 185 FGGLRISSGLALIGAVVAEFVAGTGGSGA--GLAYQILQAGFQLNIPRMFAALLLISLTG 242

Query: 253 FLYDQLL 259
                L+
Sbjct: 243 VALFVLM 249


>gi|260223440|emb|CBA34010.1| hypothetical protein Csp_B21890 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 255

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 81/245 (33%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +  ++  +   +  +  + W  +     +          +    ++    +      T +
Sbjct: 3   KKQIETWAPWVLLVVFILLWQLLCSVFEVSEFVFPSPARIWTQFWEFKGIIAGHAWRTFW 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    IA ++ + +G  IG      + + P      A P   F P++V       + P
Sbjct: 63  VTMAGFGIAIVVGVLLGFVIGSSRLAYAAVYPLMTAFNALPKAAFVPILVVWFGIG-VGP 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  + L+   + + I+ N+  G +    + ++V        W     + LP   PY+  
Sbjct: 122 AILTAFLI---SFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLVKVGLPRSMPYFYG 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  + VSE+           G+G  +  +           G++++    + 
Sbjct: 179 SLKVAITLAFVGTTVSEM------TAANEGIGYLLISAGSAMQMGLAFAGLVVVGAMAMV 232

Query: 569 LNRFL 573
           +    
Sbjct: 233 MYELF 237



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + LL   +++  +   +  + E   P               +  +A RT    ++   I
Sbjct: 11  PWVLLVVFILLWQLLCSVFEVSEFVFPSPARIWTQFWEFKGIIAGHAWRTFWVTMAGFGI 70

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   +   +   SR     + P++    ++P   F+   VV+F              A
Sbjct: 71  AIVVGVLLGFVIGSSRLAYAAVYPLMTAFNALPKAAFVPILVVWFGIGVGP--------A 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ +
Sbjct: 123 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLVKVGLPRSMPYFYGSLKV 182

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +++  +     SEM    +      GIG  +  A     +      ++ +  +  +  +L
Sbjct: 183 AITLAFVGTTVSEMTAANE------GIGYLLISAGSAMQMGLAFAGLVVVGAMAMVMYEL 236

Query: 259 ---LFRPMIVWSNK 269
              + +    W+++
Sbjct: 237 FSAIEKHTTAWAHR 250


>gi|260597897|ref|YP_003210468.1| hypothetical protein CTU_21050 [Cronobacter turicensis z3032]
 gi|260217074|emb|CBA30817.1| hypothetical protein CTU_21050 [Cronobacter turicensis z3032]
          Length = 285

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 87/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
              +      +    LP     +   +L    I  +   V++ LA  ++    +L  +  
Sbjct: 66  LQTLRAFSEDMHSGELPAKIFNSLGTLLKGYAIGSVLALVFSALAISTQLGRDLLSTLTA 125

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++  +P +  L   +++F             + IF +  S +W +  + +    ++P  L
Sbjct: 126 MLNPLPAIALLPLALLWFGLGQG--------SLIFVLVHSVMWPIALNTWSGFQSVPETL 177

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ LSG +    + +P ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 178 RMAGRNYGLSGPRLVLNILIPAALPSIISGLKIGWAFAWRTLIAAELVFGASS--GDGGL 235

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   + T++ +  L + L+F
Sbjct: 236 GWYIFQNRNELFTDRVFAGLATVIIIGLLVEGLVF 270



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W I  N  +G  + P   +    ++ ++G R    I++P   P  ++G  
Sbjct: 150 LIFVLVHSVMWPIALNTWSGFQSVPETLRMAGRNYGLSGPRLVLNILIPAALPSIISGLK 209

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 210 IGWAFAWRTLIAAELVFGASS--GDGGLGWYIFQNRNELFTDRVFAGLATVIIIGLLVEG 267

Query: 572 FLWHPLYLYGTRC 584
            ++  L     R 
Sbjct: 268 LVFATLEKATVRR 280


>gi|256957453|ref|ZP_05561624.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           DS5]
 gi|307269709|ref|ZP_07551039.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|256947949|gb|EEU64581.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           DS5]
 gi|306513819|gb|EFM82421.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4248]
 gi|315034499|gb|EFT46431.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0027]
 gi|315147009|gb|EFT91025.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4244]
 gi|329576824|gb|EGG58309.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TX1467]
          Length = 505

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|163854716|ref|YP_001629014.1| ABC transporter permease protein [Bordetella petrii DSM 12804]
 gi|163258444|emb|CAP40743.1| ABC transporter permease protein [Bordetella petrii]
          Length = 293

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 10/207 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L   +L   A  +   +L      +    +   LA  +R    +L  +  +   +P + 
Sbjct: 83  GLVHGTLLLKAWTSIRVLLVGYAAGISLAALLTVLAITTRLGTDLLETLTSMFNPLPAIA 142

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F           E + +F +  S +W +  + +    ++   L  V R++ L
Sbjct: 143 LLPLALIWFGLG--------EGSVVFVLIHSVLWAVALNTHSGFLSVSMTLRMVGRNYGL 194

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           SG+     + +P + P ++  + +  +  W  ++A+E++    +       G +I     
Sbjct: 195 SGFGYVRRILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIYENKN 252

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
             ++  +   + T++ +  L + ++FR
Sbjct: 253 LLEIPNVFAGLFTVILIGLLVENVIFR 279



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 7/218 (3%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSK 417
           + + + G  V       V   + L   T  RV+ V       +   + +        +  
Sbjct: 68  LLFPTFGATVGALYDGLVHGTLLLKAWTSIRVLLVGYAAGISLAALLTVLAITTRLGTDL 127

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++    +    PA    PL +        +    +  ++I    W +  N  +G  +   
Sbjct: 128 LETLTSMFNPLPAIALLPLALIWFGLGEGS----VVFVLIHSVLWAVALNTHSGFLSVSM 183

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             + V  ++ ++G+ + R I++P  FP  +TG       AW   I +E+           
Sbjct: 184 TLRMVGRNYGLSGFGYVRRILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL 243

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             G +I E+      P V  G+  +    L +   ++ 
Sbjct: 244 --GWFIYENKNLLEIPNVFAGLFTVILIGLLVENVIFR 279


>gi|226309354|ref|YP_002769314.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188471|dbj|BAH36575.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 263

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 15/223 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            D+   +   L   SL     +T       + + L+       L A    L +    ++D
Sbjct: 47  SDVAVALVNELGTSSLWTSLGQTVTTTAIGLALCLVVGIPAGLLLAAHPFLTVSSRFVID 106

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             +++P L  +   ++             +  A+  I    VW +       + N+  +L
Sbjct: 107 FCRTVPPLAIIPLFLLIMGP--------TQRMAVALIVAVSVWPILLQTIHGVRNVDPEL 158

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +RSFRL  W++   +  P SMP +   + +S +      + +E+I        +PG+
Sbjct: 159 LATARSFRLPLWRRLALVVAPASMPYIFTGIRISATLSLLLTIGAELIAG------VPGL 212

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-LFRPMIVWS 267
           G  I L+    D +  L  +  +LG++  +  + +   ++ W 
Sbjct: 213 GKEILLSQSVPDRMFALIIVAGLLGMLLAFAVMAIENRLLAWH 255



 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 12/184 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + + +  ++ IP G+ +   P ++   +         P     PL +  +    
Sbjct: 69  TVTTTAIGLALCLVVGIPAGLLLAAHPFLTVSSRFVIDFCRTVPPLAIIPLFLLIMGPTQ 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L++  + W IL   I G      +    A SF +  WR    ++ P   PY
Sbjct: 129 R----MAVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPY 184

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   +   +   +I +E+ +         GLG  I  S        +   +++    
Sbjct: 185 IFTGIRISATLSLLLTIGAELIAG------VPGLGKEILLSQSVPD--RMFALIIVAGLL 236

Query: 566 VLAL 569
            + L
Sbjct: 237 GMLL 240


>gi|17545919|ref|NP_519321.1| transmembrane permease ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17428214|emb|CAD14902.1| probable cog0600, abc-type nitrate/sulfonate/bicarbonate transport
           system, permease component abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 263

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASRRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
            F L L+      L     + L
Sbjct: 234 VFALVLD-----WLVGLAEKRL 250



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASRRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++ +     + D L+    + ++ W  K
Sbjct: 227 AGIVVLTVFALVLDWLVGLAEKRLMRWQPK 256


>gi|288958486|ref|YP_003448827.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288910794|dbj|BAI72283.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 266

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 12/247 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLG 383
             P   + L     V  +  + W  +     +   +      V   ++ D     + +  
Sbjct: 7   RLPSRPVILLLQLGVLIVFFLVWHVLTDMKILSPFFFGTPGAVLARSWADFASGVIWYHL 66

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+    +  +I ++  I  G W    P +S    P+ + + A P  V  P+    +  
Sbjct: 67  GITLLETALAFVIGTVAGIAFGFWFARAPLVSVVFDPYIKAVNALPRVVLAPIFALWLGL 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +    +R++ LP   
Sbjct: 127 GIWSKVALGVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASSRDLFRHVYLPSAL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   TA G A   ++V E            GLG  I ++        V  G+L++ 
Sbjct: 183 SWVFSSLHTAVGFAMVGAVVGEYLG------SAAGLGYRIHQAEGVFDTVGVFSGMLVLT 236

Query: 564 CFVLALN 570
            FV+ ++
Sbjct: 237 IFVVLID 243



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 87/249 (34%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F LV  ++  + +        P  ++           +  +   T L    A VI  
Sbjct: 22  LIVFFLVWHVLTDMKILSPFFFGTPGAVLARSWADFASGVIWYHLGITLLETALAFVIGT 81

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +    A++  + +V  P +  + ++P +       ++       KV        F
Sbjct: 82  VAGIAFGFWFARAPLVSVVFDPYIKAVNALPRVVLAPIFALWLGLGIWSKVALGVTLVFF 141

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F        F++YQ +  +   +   +R    S    F ++ +P ++  +  ++  ++
Sbjct: 142 IVF--------FNVYQGVKEVSPVVLANARMLGASSRDLFRHVYLPSALSWVFSSLHTAV 193

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---Q 257
                  V  E +          G+G  I  A    D + +   ML +   + L D    
Sbjct: 194 GFAMVGAVVGEYLG------SAAGLGYRIHQAEGVFDTVGVFSGMLVLTIFVVLIDAAVT 247

Query: 258 LLFRPMIVW 266
           ++ R ++ W
Sbjct: 248 MIERRLLHW 256


>gi|229546503|ref|ZP_04435228.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|256854465|ref|ZP_05559829.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|307277039|ref|ZP_07558145.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|307289946|ref|ZP_07569875.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|229308403|gb|EEN74390.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX1322]
 gi|256710025|gb|EEU25069.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|306499012|gb|EFM68501.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0411]
 gi|306506283|gb|EFM75447.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2134]
 gi|315030587|gb|EFT42519.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX4000]
 gi|315159708|gb|EFU03725.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0312]
 gi|323479859|gb|ADX79298.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Enterococcus faecalis 62]
          Length = 505

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|320011943|gb|ADW06793.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 294

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L ++   +  R+       +L   V   L      + +V  P +  ++++P L + + 
Sbjct: 94  HTLVEHLGISLRRIAIGAGAGVLAGLVAGILMGTLPWVRVVFEPAVAFLRTLPPLAYFSL 153

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+    +AA+  +  +    +  +           L E +R+      Q
Sbjct: 154 LIIWFGIDEAPKLWLLAIAAMPPVAVATASAVASAPAS--------LVEAARAIGARRSQ 205

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + ++    +  VVA+E +        LPGIG  I  A +    
Sbjct: 206 VVASVVLPSALPEILVGVRLAFGIAYSSVVAAETV------NGLPGIGGMIRDAQRYNQS 259

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  +  +     L D LL
Sbjct: 260 DVVVLGLFAIGVSGLLIDALL 280



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 19/203 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R+ +      +  +  GI +G  P +    +P    L   P   +F L++     
Sbjct: 101 GISLRRIAIGAGAGVLAGLVAGILMGTLPWVRVVFEPAVAFLRTLPPLAYFSLLIIWFGI 160

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L++         +     +  ++ P    E A +      +    ++LP   
Sbjct: 161 DEAPKLWLLAI----AAMPPVAVATASAVASAPASLVEAARAIGARRSQVVASVVLPSAL 216

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G A+++ + +E  +         G+G  I ++        VVLG+  + 
Sbjct: 217 PEILVGVRLAFGIAYSSVVAAETVNG------LPGIGGMIRDAQRYNQSDVVVLGLFAIG 270

Query: 564 CFVLALNRFL---------WHPL 577
              L ++  L         W  L
Sbjct: 271 VSGLLIDALLRGAENRLAPWRRL 293


>gi|260886451|ref|ZP_05897714.1| ABC transporter, permease protein [Selenomonas sputigena ATCC
           35185]
 gi|330838786|ref|YP_004413366.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260863833|gb|EEX78333.1| ABC transporter, permease protein [Selenomonas sputigena ATCC
           35185]
 gi|329746550|gb|AEB99906.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 245

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            + +L   W+ +   +A+ I       +V+      +  +      ++ R+ + +++A  
Sbjct: 10  AAAILFFVWWVLSFFLALPIVPNPWS-VVSCLQSIFLSSIAIHAIYSLGRIALGLVLAVG 68

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I  P+GI++G+         PF  L+   P     P+++       ++  L L L+++F 
Sbjct: 69  IGYPIGIFMGYAARADRIFSPFVYLMYPVPKIALLPILMLLAGVGEISKVLMLFLIIVF- 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++  V     A P +      S   + +  +R+++ P   P ++T    A   A +
Sbjct: 128 ---QVIIAVRDAVRAIPQETYMPLLSLGASFFSIFRHVLWPASLPKFITAVRVAMATAIS 184

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
               +E            GLG +I ++  + ++ E+  G+++
Sbjct: 185 VLFFTETFG------SQYGLGYFIMDAWLRVNYLEMYAGIVV 220



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 76/193 (39%), Gaps = 14/193 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           ++ + S+  +A  +  R+   +V+++   +        + R   +  P + +M  +P + 
Sbjct: 42  SIFLSSIAIHAIYSLGRIALGLVLAVGIGYPIGIFMGYAARADRIFSPFVYLMYPVPKIA 101

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++        KV+   L  +F +          ++  ++  IP++      S   
Sbjct: 102 LLPILMLLAGVGEISKVLMLFLIIVFQVI--------IAVRDAVRAIPQETYMPLLSLGA 153

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +  F ++  P S+P  +  + ++M+       A  ++   +T     G+G +I  A  
Sbjct: 154 SFFSIFRHVLWPASLPKFITAVRVAMA------TAISVLFFTETFGSQYGLGYFIMDAWL 207

Query: 235 EQDLLAILYAMLT 247
             + L +   ++ 
Sbjct: 208 RVNYLEMYAGIVV 220


>gi|238061072|ref|ZP_04605781.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
 gi|237882883|gb|EEP71711.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
          Length = 286

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 89/242 (36%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +   ++   +  +   L  +    +P     +   T     + ++   T L +L    +S
Sbjct: 43  VAGLLVAFAVWWLTARLELVHPAALPTPGSVLSAFTDKPDRMLEHTLDTMLEILIGFALS 102

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +   +     A SR +  +  P+L  + ++P +      VV             +   +
Sbjct: 103 AVAGVLLGLSLAASRTVERMFTPLLVAVNAVPKITLGPLLVVALGWG--------QKPIL 154

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F    + +  S    L   P DL E+ RS+  S WQ F  +  P ++P +   + ++
Sbjct: 155 TMVFLLCFFPIVLSTATGLTTTPSDLAELVRSWNASWWQAFRKVRFPAALPQIFVGLKVA 214

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-IFLYDQL 258
           M        A+   V+G+      G+G  I       D      A++ +  V I LY  L
Sbjct: 215 MPL------AAIGAVIGEFQAGESGLGYVITQYAGIGDTATAWAAIMLVALVSILLYSAL 268

Query: 259 LF 260
           +F
Sbjct: 269 VF 270



 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 85/227 (37%), Gaps = 11/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              ++W      +    A  + G +++ FT      ++     TM  +++   ++++  +
Sbjct: 49  AFAVWWLTARLELVHPAALPTPGSVLSAFT-DKPDRMLEHTLDTMLEILIGFALSAVAGV 107

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +     +     P    + A P     PL+V  + +        +  ++     +
Sbjct: 108 LLGLSLAASRTVERMFTPLLVAVNAVPKITLGPLLVVALGWGQK----PILTMVFLLCFF 163

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +   G +  P+D  E+  S++ + W+ +R +  P   P    G   A   A   ++
Sbjct: 164 PIVLSTATGLTTTPSDLAELVRSWNASWWQAFRKVRFPAALPQIFVGLKVAMPLAAIGAV 223

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E  +        +GLG  I +    G        ++++    + L
Sbjct: 224 IGEFQAGE------SGLGYVITQYAGIGDTATAWAAIMLVALVSILL 264


>gi|329924175|ref|ZP_08279375.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328940825|gb|EGG37137.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 277

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   T    +   ++  L   + A L   S  L  VL P + +  S+P +     
Sbjct: 80  GELWGHLGVTVGETVVGFLLGTLVGTLMAVLIWWSPFLNKVLDPYMVVFNSMPKVALGPI 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F   +         A +    +  V   T  +Y S   +  +L +V R+F  +  Q
Sbjct: 140 FIVMFGAGFT--------AIVVTTLSITVIVTTLVVYNSFNEVDSNLIKVVRTFGGTKRQ 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S P +V  + +++   W  V+  E +V         G+G  I    +  + 
Sbjct: 192 VFQRVILPASYPAIVSTLKVNVGMAWVGVIVGEFLVAKS------GLGYLIMYGFQVFNF 245

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L +  V     Q++
Sbjct: 246 TLVLSSLLIIAVVATAMYQIV 266



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   VV  ++ +++   + + I + P ++  + P+  +  + P     P+ +     
Sbjct: 87  GVTVGETVVGFLLGTLVGTLMAVLIWWSPFLNKVLDPYMVVFNSMPKVALGPIFIVMFGA 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +    + +  T       V    +   ++  +V  +F  T  + ++ +ILP  +
Sbjct: 147 GFTAIVVTTLSITVIVT----TLVVYNSFNEVDSNLIKVVRTFGGTKRQVFQRVILPASY 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V+      G AW   IV E        +  +GLG  I    +  +F  V+  +LI+ 
Sbjct: 203 PAIVSTLKVNVGMAWVGVIVGEFL------VAKSGLGYLIMYGFQVFNFTLVLSSLLIIA 256

Query: 564 CFVLALNRFL 573
               A+ + +
Sbjct: 257 VVATAMYQIV 266


>gi|329945601|ref|ZP_08293334.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328528604|gb|EGF55569.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 360

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 88/289 (30%), Gaps = 13/289 (4%)

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L RK +       +     + ++  +    R               + +         +
Sbjct: 70  DLLRKGSTTPVTVLAGTWLIALIAWTLTARVRPASSAARSLTHFLPWINA---AGVWFIV 126

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +         +   + +   ++      D   ++     +    ++     S++    G+
Sbjct: 127 WQLTTSKLGLLTPPYFAAPEVLIASFLGDWRLLLSCLGASALLFIIGYTAGSVLGFFTGL 186

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+         P  Q +   PA      ++              + ++ FG  + +  
Sbjct: 187 LMGWSRRADYWFHPLLQTIGPVPAAS----LLPLALLLIPTTYASAAFIVGFGAWFPMAT 242

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              AG  +   D+ ++A +         R + +P   P  +TG  T  G +  A + +E+
Sbjct: 243 MTRAGVRSVRRDYIDMARTLGADELFLIRRVAVPSALPDMLTGLFTGLGTSLAALMTAEL 302

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                      GL  YI        +P + +G++ +  F   L   L+ 
Sbjct: 303 ------TGVDKGLAWYINWVKGWADYPRMYVGLITLVTFCRTLMVLLFK 345



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 84/270 (31%), Gaps = 21/270 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITL--DVHSL 61
           + P   + R   +    +    V  I+  L         P      +++  +   D   L
Sbjct: 100 VRPASSAARSLTHFLPWINAAGVWFIVWQLTTSKLGLLTPPYFAAPEVLIASFLGDWRLL 159

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 + L  +       +  F    L   SRR      P+L  +  +           
Sbjct: 160 LSCLGASALLFIIGYTAGSVLGFFTGLLMGWSRRADYWFHPLLQTIGPV--------PAA 211

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + L    +     +A F +     + M       + ++ RD  +++R+          
Sbjct: 212 SLLPLALLLIPTTYASAAFIVGFGAWFPMATMTRAGVRSVRRDYIDMARTLGADELFLIR 271

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP ++P ++  +   +      ++ +E+  V        G+  YI       D   +
Sbjct: 272 RVAVPSALPDMLTGLFTGLGTSLAALMTAELTGVDK------GLAWYINWVKGWADYPRM 325

Query: 242 LYAMLTMLGVIFLYDQLLFRP---MIVWSN 268
              ++T++        LLF+    ++ W  
Sbjct: 326 YVGLITLVTFCRTLMVLLFKIRSSLLAWQQ 355


>gi|325965363|ref|YP_004243268.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471450|gb|ADX75134.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 264

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V +  +IA+ I  P+G  IG    + +   P      A P  +FFP+++      
Sbjct: 75  ATLQAVAIGFLIAAAIGFPLGYGIGRSKFLGAVFDPLVAGAFAIPRVIFFPILLQIFGVG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +   +L  +F     I+ +  AG  A      ++A S  ++  +    I +P + P
Sbjct: 135 VGAQSAMAALAAVF----PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       A+   I++E  +         GLG     +      P +   ++++  
Sbjct: 191 SLMVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAA 244

Query: 565 FVLALNRFLW 574
             LA N  LW
Sbjct: 245 IALAGNLVLW 254



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 14/248 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R I  N++     V ++ +  +L         P D +D +       S+ ++ + T   +
Sbjct: 21  RVIRDNVWRAAVLVALVLLWALLSTMSDLVASPADSLDALAERFADGSIYRHLNATLQAV 80

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +I+    F       +S+ LG V  P++    +IP + F    +  F      +  
Sbjct: 81  AIGFLIAAAIGFPLGYGIGRSKFLGAVFDPLVAGAFAIPRVIFFPILLQIFGVGVGAQSA 140

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A LAA+F         +  S    +  I   L +++RS  LS  Q    + +P   P L
Sbjct: 141 MAALAAVF--------PIMVSTTAGVRAINPLLPKLARSLSLSPLQTVTKIYIPAMAPSL 192

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +  S  +  V+ +E            G+G     A    DL  +   ++ +  + 
Sbjct: 193 MVGIRIGFSIAFINVIIAEFFA------ARAGLGLLALRAYGMLDLPTMYGIIVLLAAIA 246

Query: 253 FLYDQLLF 260
              + +L+
Sbjct: 247 LAGNLVLW 254


>gi|148258796|ref|YP_001243381.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410969|gb|ABQ39475.1| putative ABC transporter permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 282

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 87/254 (34%), Gaps = 17/254 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I +          P  +   +          Q+   T   +L   +       V     
Sbjct: 30  VIRVFGIAPFILPAPSAVAQALWRGFANGPFLQHTLTTVAEVLLGFIFGSAVGLVLGVGI 89

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A +R +   + P + +  S+P +      V++F      K++ A L   F +        
Sbjct: 90  ALNRHIAYFVYPYIVMFLSMPKVALAPLIVLWFGLGITSKIVTAALVTFFPVMV------ 143

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L    RD  ++ RS   +  Q F  L +P ++P +V  + ++M+      V +
Sbjct: 144 --NTIAGLNAADRDGIDLIRSLGGTERQIFTMLRLPAALPMIVAGLEIAMTLSLIGTVVA 201

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
           E+I          G+G  +       D   +   ++ +  V  + +Q L    R MI W 
Sbjct: 202 ELIG------AEQGLGMLMQSMNFSMDTAGVFSILIVLAIVGLVLNQALKSARRRMIFWE 255

Query: 268 NKFRLERTTGIYPA 281
           N  R   T     +
Sbjct: 256 NAGRASSTPSRRAS 269



 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  V++  I  S + + +G+ I    HI+  + P+  +  + P     PL+V     
Sbjct: 65  LTTVAEVLLGFIFGSAVGLVLGVGIALNRHIAYFVYPYIVMFLSMPKVALAPLIVLWFGL 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  +  +L+    T + ++ N IAG +A   D  ++  S   T  + +  + LP   
Sbjct: 125 GITSKIVTAALV----TFFPVMVNTIAGLNAADRDGIDLIRSLGGTERQIFTMLRLPAAL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V G   A   +   ++V+E+           GLG  +           V   ++++ 
Sbjct: 181 PMIVAGLEIAMTLSLIGTVVAELIG------AEQGLGMLMQSMNFSMDTAGVFSILIVLA 234

Query: 564 CFVLALNRFL 573
              L LN+ L
Sbjct: 235 IVGLVLNQAL 244


>gi|222102537|ref|YP_002539576.1| taurine uptake ABC transporter permease protein [Agrobacterium
           vitis S4]
 gi|221739138|gb|ACM39871.1| taurine uptake ABC transporter permease protein [Agrobacterium
           vitis S4]
          Length = 261

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++FR+ V  I+A    IP+G+ +G        +    +     P   + PL++  +  
Sbjct: 68  GASLFRIGVAAILAIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPLMIIWLGI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +++       I  +  AG  + P +    A S     W+ +  I+ P   
Sbjct: 128 GETSK----IMVLFLAMFAPICLSAQAGVKSVPIERVNAARSLGANRWQLFSSIVFPSAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG     G  W   + +E+ +       T G+G  I  +++  +   V +G+ I+ 
Sbjct: 184 PEILTGIRIGLGIGWGTLVAAELIA------STRGIGYMIMSASQFLATDVVFVGIAIIS 237

Query: 564 CFVLAL---NRFLWHPLYLY 580
               A     R L   L  +
Sbjct: 238 VCAFAFGAAIRLLERVLVPW 257



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 17/214 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+  +   +  R+  A ++++        L   +R    +L   ++    +P L +L  
Sbjct: 61  ASIGDHVGASLFRIGVAAILAIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++            E + I  +F +    +  S    + ++P +    +RS   + WQ
Sbjct: 121 MIIWLGIG--------ETSKIMVLFLAMFAPICLSAQAGVKSVPIERVNAARSLGANRWQ 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +  P ++P ++  + + +  GW  +VA+E+I          GIG  I  A +    
Sbjct: 173 LFSSIVFPSALPEILTGIRIGLGIGWGTLVAAELIA------STRGIGYMIMSASQFLAT 226

Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269
             +   +  +    F +    +LL R ++ W  K
Sbjct: 227 DVVFVGIAIISVCAFAFGAAIRLLERVLVPWKGK 260


>gi|220936239|ref|YP_002515138.1| binding-protein-dependent transport systems inner membrane
           component [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997549|gb|ACL74151.1| binding-protein-dependent transport systems inner membrane
           component [Thioalkalivibrio sp. HL-EbGR7]
          Length = 319

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 10/171 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +     ++S+I +P+GI  G    +S   +PF +     PA  F  L V+ +  + 
Sbjct: 126 SIQVIFWGFFLSSLIGVPLGILAGTYVAVSRLTEPFVEFFRYLPAPAFGALAVAILGIHD 185

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++  GT +  +  V            E A +           +++PGI   
Sbjct: 186 APK----IAIIFIGTFFQQVLVVANTTRKLDPALLEAAMTLGARNAGLLFKVVIPGIASD 241

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
                    G AW   IV+E+         ++G+  +I +     +F  V 
Sbjct: 242 LYRDMRILLGWAWTYLIVAEMIG------ASSGITWFITQQARYKNFDNVF 286



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 71/229 (31%), Gaps = 17/229 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T         P   +   L +  + +   +     +S L       LA     +  +  
Sbjct: 100 ATALYTAFTTEPQRRNEKWLHESLADSIQVIFWGFFLSSLIGVPLGILAGTYVAVSRLTE 159

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P ++  + +P   F    V              +   I  IF    +     +  +   +
Sbjct: 160 PFVEFFRYLPAPAFGALAVAILGI--------HDAPKIAIIFIGTFFQQVLVVANTTRKL 211

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E + +         + + +P     L  +M + +   W +++ +EMI        
Sbjct: 212 DPALLEAAMTLGARNAGLLFKVVIPGIASDLYRDMRILLGWAWTYLIVAEMIGASS---- 267

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
             GI  +I    + ++   +  A+L +  +    D +   L R +  W 
Sbjct: 268 --GITWFITQQARYKNFDNVFAAILIIGIIGLTTDLILAWLGRRLFPWQ 314


>gi|302553673|ref|ZP_07306015.1| glycine betaine ABC transport system integral membrane protein
           [Streptomyces viridochromogenes DSM 40736]
 gi|302471291|gb|EFL34384.1| glycine betaine ABC transport system integral membrane protein
           [Streptomyces viridochromogenes DSM 40736]
          Length = 662

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 21/258 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++   +    A  S R+   L PILD MQ +P   +L   V+ F 
Sbjct: 144 TMQTLALMVVAVLASVVVGVLLGLAAGLSDRMDRALRPILDTMQVLPAFAYLLPVVLVFG 203

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L    + + E   S   +  Q+     
Sbjct: 204 IGVP--------AAVLATVIYAAPPMARLTSLGLRGADKSVLEAVESLGSTARQRLLTAR 255

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   L+  +  ++       V + +I  G       G+G  +  A+   D+ A L A
Sbjct: 256 IPLARKELLLGVNQTIMMALSMAVIAAVIGAG-------GLGDRVYQALASVDVGAALAA 308

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
            + ++ +  + D+      +  +   RL      +    W+  L  +    R        
Sbjct: 309 GIPIVLLAVVLDR------VTGAAGERLGAEPEPHSGRGWLYALAERRRRGRRRTPHGPP 362

Query: 305 FFSPLSNNVKKLCRTLGV 322
             +   +   +  R  G 
Sbjct: 363 RLARDLDRRHRRTRQPGR 380



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 90/286 (31%), Gaps = 22/286 (7%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLC-----RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
            +    + +F +PL+     +        L +  F    N + +        +L I W  
Sbjct: 48  TWPSALTLDFSAPLAKASDWIIDNRDSHPLFLYFFGHVSNVVVIAVRAVYLTLLAIGWAG 107

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405
           V    A+ +AW+  G  +   T    L    LG       T+  +VV ++ + ++ + +G
Sbjct: 108 VTALGAL-VAWRVAGVKLALGTAVAFLACGLLGMWVPTMQTLALMVVAVLASVVVGVLLG 166

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +  G    +   ++P    +   PA  +   VV               L  +      + 
Sbjct: 167 LAAGLSDRMDRALRPILDTMQVLPAFAYLLPVVLVFGIG----VPAAVLATVIYAAPPMA 222

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G         E   S   T  +      +P      + G       A + ++++ 
Sbjct: 223 RLTSLGLRGADKSVLEAVESLGSTARQRLLTARIPLARKELLLGVNQTIMMALSMAVIAA 282

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           V   G       GLG  + ++         +   + +    + L+R
Sbjct: 283 VIGAG-------GLGDRVYQALASVDVGAALAAGIPIVLLAVVLDR 321


>gi|156978036|ref|YP_001448942.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Vibrio harveyi ATCC BAA-1116]
 gi|156529630|gb|ABU74715.1| hypothetical protein VIBHAR_06840 [Vibrio harveyi ATCC BAA-1116]
          Length = 266

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L   
Sbjct: 32  AVILGLWQLVVVIFDMPSFILPSPIEVLDRLVTRYDVLLKHTWVTAQEILLGLALGLSMG 91

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F + 
Sbjct: 92  LLFAFQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVT 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++   
Sbjct: 152 TCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV--- 200

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   L 
Sbjct: 201 ---VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL 257

Query: 261 RPMIVWSNK 269
           +  I W +K
Sbjct: 258 KKAIPWESK 266



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +     +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFAFQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAV 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|219855452|ref|YP_002472574.1| hypothetical protein CKR_2109 [Clostridium kluyveri NBRC 12016]
 gi|219569176|dbj|BAH07160.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 260

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 10/232 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + + I+  C V      +       + +        Y       ++ RV++ I+++ II 
Sbjct: 33  FWILIWHVCSVFINEELLLPSPFQVLKSLVLLMGKFYFWKSVLSSVIRVIIGILLSVIIG 92

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I  G+  G    +   ++P    + A P      + +        N +  +    I    
Sbjct: 93  IVFGLTAGLNKFVEELLEPVVITVKATPVISIIIIALVWF-----NSSNVVIFTAILICF 147

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  NV+ G  +      ++A+ F +      + I LP I  Y V+G +   G  W  S
Sbjct: 148 PIVYTNVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNYIVSGILMCMGIGWKVS 207

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + SEV S          +G  +  +       E+    +++        +  
Sbjct: 208 VASEVLSIPRYS-----IGLNLLSAKTTLETAELFAWTIVVVILSFMFEKVF 254



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 86/197 (43%), Gaps = 9/197 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+  + ++ ++       P  ++  + + +      +    + +R++  +++S++   V
Sbjct: 35  ILIWHVCSVFINEELLLPSPFQVLKSLVLLMGKFYFWKSVLSSVIRVIIGILLSVIIGIV 94

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   A  ++ +  +L P++  +++ P++  +   +V+F +             IF     
Sbjct: 95  FGLTAGLNKFVEELLEPVVITVKATPVISIIIIALVWFNSSN---------VVIFTAILI 145

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  ++ Q + +I + L +++  F++        + +P     +V  ++M M  GW 
Sbjct: 146 CFPIVYTNVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNYIVSGILMCMGIGWK 205

Query: 206 FVVASEMIVVGDTVIPL 222
             VASE++ +    I L
Sbjct: 206 VSVASEVLSIPRYSIGL 222


>gi|171321953|ref|ZP_02910840.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171092752|gb|EDT38032.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 262

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 91/260 (35%), Gaps = 17/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71
           RR    +      +      +      Q   VP   V    + L     L      +  R
Sbjct: 14  RRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGATLVELTRSGELATDLGASLRR 73

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               +   + F  V+    A+S     +  P    ++ +P+LG +    ++         
Sbjct: 74  TTLGLGFGVAFGLVFGAAMARSPLARKLGEPTFQALRYVPLLGLIPLLSLWAGTG----- 128

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F I  +  + MT + +  L  +     E+++S RL+    +  + +P ++P 
Sbjct: 129 ---EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSCRLTRIDLWRDVLIPGALPD 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   ++ ++   W    +SE++          G+GS +  A        +L  +L +  +
Sbjct: 186 LFAGVLQAVPFAWITATSSELLFNTGA-----GVGSLMQNAQAGARADVLLVCVLGVTAL 240

Query: 252 IFLYDQL---LFRPMIVWSN 268
                 L   + +  + W +
Sbjct: 241 AVGMSALCERIAQRALRWRD 260



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 71/253 (28%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYV 379
           V R        +      V  +L   W     G A                        +
Sbjct: 4   VTRTFSLAPLRRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGATLVELTRSGEL 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R  + +       +  G  +   P      +P  Q L   P     PL+  
Sbjct: 64  ATDLGASLRRTTLGLGFGVAFGLVFGAAMARSPLARKLGEPTFQALRYVPLLGLIPLLSL 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          ++     + +      G       + E+A S  +T    WR +++
Sbjct: 124 WAGTG----EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSCRLTRIDLWRDVLI 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G + A   AW  +  SE+           G+G+ +  +        +++ V
Sbjct: 180 PGALPDLFAGVLQAVPFAWITATSSELL-----FNTGAGVGSLMQNAQAGARADVLLVCV 234

Query: 560 LIMCCFVLALNRF 572
           L +    + ++  
Sbjct: 235 LGVTALAVGMSAL 247


>gi|87309567|ref|ZP_01091701.1| ABC transporter permease protein [Blastopirellula marina DSM 3645]
 gi|87287331|gb|EAQ79231.1| ABC transporter permease protein [Blastopirellula marina DSM 3645]
          Length = 517

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 74/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LPQ  +        A++I    +       ++ +R   V + +  I+Q+IP L  L   V
Sbjct: 13  LPQRLAGHIFLSFMALLIGGAISLPLGVWCSRRKRAEQVALTVASIIQTIPSLALLAAMV 72

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             +  +           A+ A+    +  M  +    + ++     E ++   +S  Q+ 
Sbjct: 73  FAWGKIG-------WFPALVALVLYSLLPMLRNTITGIQSVDPACLEAAQGLGMSDRQRL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P +V  +  +    W    A+    VG T      +G+YI   ++  + +A
Sbjct: 126 RLVELPLAAPTIVAGIRTA--AVWVVGAATIAQPVGATS-----LGNYIFAGLQTLNPVA 178

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +         +    D LL
Sbjct: 179 LGVGCFFSAALALSIDALL 197



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++I   I +P+G+W   R          A ++   P+     L     ++  +    
Sbjct: 25  FMALLIGGAISLPLGVWCSRRKRAEQVALTVASIIQTIPSLAL--LAAMVFAWGKIGWFP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L  L+++ +   +L N I G  +      E A    ++  +  R + LP   P  V G 
Sbjct: 83  ALVALVLY-SLLPMLRNTITGIQSVDPACLEAAQGLGMSDRQRLRLVELPLAAPTIVAGI 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA      A+ +++           T LG YI    +  +   + +G        L+++
Sbjct: 142 RTAAVWVVGAATIAQPVG-------ATSLGNYIFAGLQTLNPVALGVGCFFSAALALSID 194

Query: 571 RFL 573
             L
Sbjct: 195 ALL 197


>gi|257418290|ref|ZP_05595284.1| ABC transporter [Enterococcus faecalis T11]
 gi|257160118|gb|EEU90078.1| ABC transporter [Enterococcus faecalis T11]
          Length = 505

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|239945675|ref|ZP_04697612.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239992144|ref|ZP_04712808.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291449133|ref|ZP_06588523.1| ABC transporter permease protein [Streptomyces roseosporus NRRL
           15998]
 gi|291352080|gb|EFE78984.1| ABC transporter permease protein [Streptomyces roseosporus NRRL
           15998]
          Length = 287

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 10/159 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P        P     PL V  + +          L+ +    + ++ +++ 
Sbjct: 112 SSTVERTLYPILLFAQVVPKIAIAPLFVVWLGFG----IAPKILIAVLIAFFPVVISMVT 167

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A   +  +++++     W+ +  I  P   P+  +G   A   A   ++V E     
Sbjct: 168 GLKAVDPEMLQLSATMGAKPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVG-- 225

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  GLG  I ++      P +  G+L+M    + L
Sbjct: 226 ----ANEGLGYVILQANGNLDTPMLFAGLLVMSLIGVVL 260



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 17/232 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           I+   VP     +  +T     L Q+   TT   L    I+++   + A +   S  +  
Sbjct: 58  IEAYLVPSPGATLDVLTSKAGYLWQHTWVTTYETLLGFAIAVVVGVLAAVVMVYSSTVER 117

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L PIL   Q +P +      VV+       K++ A L A F         +  SM   L
Sbjct: 118 TLYPILLFAQVVPKIAIAPLFVVWLGFGIAPKILIAVLIAFF--------PVVISMVTGL 169

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  ++ ++S +     WQ F  +  P S+P L   + ++++      V  E +   + 
Sbjct: 170 KAVDPEMLQLSATMGAKPWQTFVKIRFPASLPHLFSGLKVAVTLAVTGAVVGEFVGANE- 228

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIVWS 267
                G+G  I  A    D   +   +L M     V+F+  ++  + ++ W 
Sbjct: 229 -----GLGYVILQANGNLDTPMLFAGLLVMSLIGVVLFVVVEIAEKLLLPWH 275


>gi|118593747|ref|ZP_01551116.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118433657|gb|EAV40320.1| Binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 283

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 22/259 (8%)

Query: 16  FPNIFDLLAFVLVIGI----INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            P +  L+ FVL++ +      +          P  I+     ++      ++   T   
Sbjct: 34  MPIVLPLITFVLILIVWEAGTRLFAVPSFVLPAPSRILGGFE-SVTAGRWFEHIWATLRV 92

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    +S + +   A   AKSR L     P+L ++QS+P++      +V        + 
Sbjct: 93  ALIGYAVSFVISLPIAVGLAKSRLLSGAFYPLLVVIQSVPVVAVAPIIIVVLGTGDAPR- 151

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +   F    + +  SM   L   P +L E+SRS R   +++   + +P++ P 
Sbjct: 152 -------VVITFMISFFPLVVSMTTGLAATPPELIELSRSLRAPSFREITQIRLPYATPY 204

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTM 248
           +   M +S++      V SE +          GIG +I  +     L    A L  ++ M
Sbjct: 205 IFSGMKISITLSVIGAVVSEFVA------AEKGIGYFIQFSTSMFKLPQAWAGLVILVIM 258

Query: 249 LGVIFLYDQLLFRPMIVWS 267
             V+F    LL R    WS
Sbjct: 259 SLVLFQLVSLLQRVFFPWS 277



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 77/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   ++ +I +P+ + +     +S    P   ++ + P     P+++  +   
Sbjct: 88  ATLRVALIGYAVSFVISLPIAVGLAKSRLLSGAFYPLLVVIQSVPVVAVAPIIIVVLGTG 147

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++    + + ++ ++  G +A P +  E++ S     +R    I LP   P
Sbjct: 148 DA----PRVVITFMISFFPLVVSMTTGLAATPPELIELSRSLRAPSFREITQIRLPYATP 203

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  +G   +   +   ++VSE  +         G+G +I  ST     P+   G++I+  
Sbjct: 204 YIFSGMKISITLSVIGAVVSEFVAAEK------GIGYFIQFSTSMFKLPQAWAGLVILVI 257

Query: 565 FVLALNRFL 573
             L L + +
Sbjct: 258 MSLVLFQLV 266


>gi|327459791|gb|EGF06131.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1057]
          Length = 506

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 78/198 (39%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L   +               L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGI--------LP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNANLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGILPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNANLILIGAISSAVLAILFNSLL 198


>gi|322805685|emb|CBZ03250.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Clostridium botulinum H04402 065]
          Length = 253

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   RKNKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P      + +  +   
Sbjct: 67  KSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWLK-- 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 125 SSSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 99/228 (43%), Gaps = 9/228 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +V +  + ++ ++       P+ + + + I            ++ +R++  ++IS++
Sbjct: 22  IIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISIV 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +A  +  +  +L P++  +++ P++  +   +V+         + +   AIF 
Sbjct: 82  LGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVW---------LKSSSVAIFT 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++   + ++ + L E++  + +        + +P + P ++  ++M + 
Sbjct: 133 SILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            GW   VASE++      I L  + +   LA +E     I+  +L+++
Sbjct: 193 IGWKVSVASEVLSTPRYSIGLNLLNAKATLATEELFAWTIVVVLLSLI 240


>gi|170736373|ref|YP_001777633.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169818561|gb|ACA93143.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 262

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 89/250 (35%), Gaps = 14/250 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71
           RR    +      +      +      Q   VP   V    + L     L      +  R
Sbjct: 14  RRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGATLVELARSGELATDLGASLRR 73

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               +   + F  V+    A+S     +  P    ++ +P+LG +    ++         
Sbjct: 74  TTLGLGFGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSLWAGTG----- 128

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F I  + ++ MT + +  L  +     E+++S+RL+    +  + +P ++P 
Sbjct: 129 ---EFAKVFIIALAALYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLIPGALPD 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   ++ ++   W    +SE++          G+GS +  A        +L  +L +  +
Sbjct: 186 LFAGVLQAVPFAWITATSSELLFNTGA-----GVGSLMQNAQAGARADVLLVCVLGVTAL 240

Query: 252 IFLYDQLLFR 261
                 L  R
Sbjct: 241 AVGMSSLCER 250



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 71/253 (28%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYV 379
           V R        +      V  +L   W     G A                        +
Sbjct: 4   VTRVASLAPLRRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGATLVELARSGEL 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R  + +       +  G  +          +P  Q L   P     PL+  
Sbjct: 64  ATDLGASLRRTTLGLGFGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSL 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          ++     + +      G       + E+A S+ +T    WR +++
Sbjct: 124 WAGTG----EFAKVFIIALAALYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLI 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G + A   AW  +  SE+           G+G+ +  +        +++ V
Sbjct: 180 PGALPDLFAGVLQAVPFAWITATSSELL-----FNTGAGVGSLMQNAQAGARADVLLVCV 234

Query: 560 LIMCCFVLALNRF 572
           L +    + ++  
Sbjct: 235 LGVTALAVGMSSL 247


>gi|317404024|gb|EFV84483.1| alkanesulfonate transporter [Achromobacter xylosoxidans C54]
          Length = 260

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                 + +    Q++   P     PLV+             LS     G  + +  N  
Sbjct: 90  SSRTAETLLDTTLQMIRNIPVLALIPLVILWFGIEETAKLALLS----LGVFFPVYLNTF 145

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  +      E+  S+ +TGWR +R +ILPG  P  + G   A G  W   IV+E  S 
Sbjct: 146 HGIRSVDPALIEMGRSYGLTGWRLYRDVILPGALPSTLVGLRFALGLVWVILIVTETIS- 204

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEV 555
                  +G+G     + E      V
Sbjct: 205 -----AQSGIGYMTMNAREFLQTDVV 225



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 63/149 (42%), Gaps = 14/149 (9%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR    +L   L ++++IP+L  +   +++F      K+    L   F ++         
Sbjct: 91  SRTAETLLDTTLQMIRNIPVLALIPLVILWFGIEETAKLALLSLGVFFPVY--------L 142

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           + +  + ++   L E+ RS+ L+GW+ +  + +P ++P  +  +  ++   W  ++ +E 
Sbjct: 143 NTFHGIRSVDPALIEMGRSYGLTGWRLYRDVILPGALPSTLVGLRFALGLVWVILIVTET 202

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           I          GIG     A +      +
Sbjct: 203 IS------AQSGIGYMTMNAREFLQTDVV 225


>gi|310816037|ref|YP_003964001.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308754772|gb|ADO42701.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 255

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 72/195 (36%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+  +++  +++ ++ IP+G+ +      S  I P    L AFP     P++V
Sbjct: 53  IFSNTFATLKTILMGFLLSCLVGIPLGVAVSVNRLTSEAIYPLIVFLNAFPTVAIAPILV 112

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          +++     + I+     G    P++  ++A     +  R    + 
Sbjct: 113 VIFG----PDETTRLIIVTLTAFFPIMVATATGIMDTPDEMMDLARVAGASPLRAVITVR 168

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    +   G       A   ++V+E  +         GLG  +  ST + + P  +  
Sbjct: 169 LPHAVSFIFGGLRVGVTVAVIGAVVAEFVN------ANRGLGFLVTSSTAQFAIPTAMAC 222

Query: 559 VLIMCCFVLALNRFL 573
           V+++    + L   +
Sbjct: 223 VVMLALISVILYELV 237



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 70/195 (35%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T   +L   ++S L         + +R     + P++  + + P +      VV F 
Sbjct: 57  TFATLKTILMGFLLSCLVGIPLGVAVSVNRLTSEAIYPLIVFLNAFPTVAIAPILVVIFG 116

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                ++I   L A F         +  +    + + P ++ +++R    S  +    + 
Sbjct: 117 PDETTRLIIVTLTAFF--------PIMVATATGIMDTPDEMMDLARVAGASPLRAVITVR 168

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  +   + + ++      V +E +          G+G  +  +  +  +   +  
Sbjct: 169 LPHAVSFIFGGLRVGVTVAVIGAVVAEFVNAN------RGLGFLVTSSTAQFAIPTAMAC 222

Query: 245 MLTMLGVIFLYDQLL 259
           ++ +  +  +  +L+
Sbjct: 223 VVMLALISVILYELV 237


>gi|307289632|ref|ZP_07569576.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|306499446|gb|EFM68819.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0109]
 gi|315164548|gb|EFU08565.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1302]
          Length = 505

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|29375273|ref|NP_814426.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecalis V583]
 gi|227554789|ref|ZP_03984836.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229548621|ref|ZP_04437346.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|255971135|ref|ZP_05421721.1| ABC transporter permease [Enterococcus faecalis T1]
 gi|255973759|ref|ZP_05424345.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256761446|ref|ZP_05502026.1| ABC transporter permease [Enterococcus faecalis T3]
 gi|256964486|ref|ZP_05568657.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           HIP11704]
 gi|257077549|ref|ZP_05571910.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           JH1]
 gi|257420938|ref|ZP_05597928.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294780459|ref|ZP_06745824.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|300861927|ref|ZP_07108007.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|307272487|ref|ZP_07553740.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
 gi|307284563|ref|ZP_07564725.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|312900268|ref|ZP_07759580.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
 gi|312953059|ref|ZP_07771909.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|29342732|gb|AAO80497.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecalis V583]
 gi|227176088|gb|EEI57060.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis HH22]
 gi|229306252|gb|EEN72248.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis ATCC 29200]
 gi|255962153|gb|EET94629.1| ABC transporter permease [Enterococcus faecalis T1]
 gi|255966631|gb|EET97253.1| ABC transporter permease [Enterococcus faecalis T2]
 gi|256682697|gb|EEU22392.1| ABC transporter permease [Enterococcus faecalis T3]
 gi|256954982|gb|EEU71614.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           HIP11704]
 gi|256985579|gb|EEU72881.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           JH1]
 gi|257162762|gb|EEU92722.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294452458|gb|EFG20895.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis PC1.1]
 gi|295114103|emb|CBL32740.1| Periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system (osmoprotectant binding
           protein) [Enterococcus sp. 7L76]
 gi|300848452|gb|EFK76209.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecalis TUSoD Ef11]
 gi|306503240|gb|EFM72494.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0860]
 gi|306510772|gb|EFM79789.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0855]
 gi|310628968|gb|EFQ12251.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0102]
 gi|311292629|gb|EFQ71185.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0470]
 gi|315031419|gb|EFT43351.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0017]
 gi|315144503|gb|EFT88519.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX2141]
 gi|315154029|gb|EFT98045.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0031]
 gi|315156673|gb|EFU00690.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX0043]
 gi|315166869|gb|EFU10886.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1341]
 gi|315170759|gb|EFU14776.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1342]
 gi|315173991|gb|EFU18008.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis TX1346]
 gi|315575303|gb|EFU87494.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309B]
 gi|315581470|gb|EFU93661.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis
           TX0309A]
          Length = 505

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|116691626|ref|YP_837159.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|116649626|gb|ABK10266.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 262

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 17/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71
           RR    +      +      +      Q   VP   V    + L     L      +  R
Sbjct: 14  RRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGAALVELARSGELTTDLGASLRR 73

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               +   + F  V+    A+S     +  P    ++ +P+LG +    ++         
Sbjct: 74  TTLGLGFGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSLWAGTG----- 128

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +F I  +  + MT + +  L  +     E+++S+RL+    +  + +P ++P 
Sbjct: 129 ---EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLIPGALPD 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   ++ ++   W    +SE++          G+GS +  A        +L  +L +  +
Sbjct: 186 LFAGVLQAVPFAWITATSSELLFNTGA-----GVGSLMQNAQAGARADVLLVCVLGVTAL 240

Query: 252 IFLYDQL---LFRPMIVWSN 268
                 L   + +  + W +
Sbjct: 241 AVGMSTLCERIAQRALRWRD 260



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 71/253 (28%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYV 379
           V R        +      V  +L   W     G A                        +
Sbjct: 4   VTRVASLAPLRRRARGLVVPALLLAAWQTASSGDAAHQYAFVPLQQVGAALVELARSGEL 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R  + +       +  G  +          +P  Q L   P     PL+  
Sbjct: 64  TTDLGASLRRTTLGLGFGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSL 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          ++     + +      G       + E+A S+ +T    WR +++
Sbjct: 124 WAGTG----EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLI 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G + A   AW  +  SE+           G+G+ +  +        +++ V
Sbjct: 180 PGALPDLFAGVLQAVPFAWITATSSELL-----FNTGAGVGSLMQNAQAGARADVLLVCV 234

Query: 560 LIMCCFVLALNRF 572
           L +    + ++  
Sbjct: 235 LGVTALAVGMSTL 247


>gi|256959807|ref|ZP_05563978.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           Merz96]
 gi|293384995|ref|ZP_06630829.1| choline transporter [Enterococcus faecalis R712]
 gi|293389265|ref|ZP_06633727.1| choline transporter [Enterococcus faecalis S613]
 gi|312905984|ref|ZP_07764997.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|312909330|ref|ZP_07768186.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
 gi|256950303|gb|EEU66935.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           Merz96]
 gi|291077673|gb|EFE15037.1| choline transporter [Enterococcus faecalis R712]
 gi|291081429|gb|EFE18392.1| choline transporter [Enterococcus faecalis S613]
 gi|310627979|gb|EFQ11262.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           512]
 gi|311290354|gb|EFQ68910.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           substrate-binding protein [Enterococcus faecalis DAPTO
           516]
          Length = 505

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRSPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRS 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|260904594|ref|ZP_05912916.1| ABC-type proline/glycine betaine transport system, permease
           component [Brevibacterium linens BL2]
          Length = 298

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++I ++ ++   ++   +    V  +   L +      + +T   +L A VI+++    
Sbjct: 51  LVIIVLLALIGWVLRSWQMALGTVITMFFILTMDQ-WVASMQTLALVLIAAVIAVIIAVP 109

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              LAA++     V+ P+LD MQ++P   +L   V +F     G V G     IFA+   
Sbjct: 110 VGILAARNDAASTVIKPVLDFMQTMPSFVYLIPAVTFFG---IGVVPGLVATVIFALPPG 166

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             +         +  +  +  E  +SF  +  Q    + +P + P ++  +   +     
Sbjct: 167 VRF-----TELGIRGVDSETVEAGQSFGATPGQILRGVQLPLATPTIMAGINQVIMLALA 221

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             V + M+          G+G  +  AI  Q+L   + A L ++ +    D++
Sbjct: 222 MAVIAGMV-------GADGLGKNVVEAIATQNLPLGVEAGLGVVIIAVYLDRV 267



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 15/274 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           IG      F  L  NV      +  +   F E    +  +     ++ +         + 
Sbjct: 8   IGAWVDTAFDWLKENVAWFFDAVTWLFNFFIEILTDVLVDLHPLVIIVLLALIGWVLRSW 67

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +A  ++  +    T    +        T+  V++  +IA II +PVGI        S+ 
Sbjct: 68  QMALGTVITMFFILTMDQWV----ASMQTLALVLIAAVIAVIIAVPVGILAARNDAASTV 123

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I+P    +   P+ V+    V+      +   +   +  +     +       G     +
Sbjct: 124 IKPVLDFMQTMPSFVYLIPAVTFFGIGVVPGLVATVIFALPPGVRF----TELGIRGVDS 179

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  E   SF  T  +  R + LP   P  + G       A   ++++ +           
Sbjct: 180 ETVEAGQSFGATPGQILRGVQLPLATPTIMAGINQVIMLALAMAVIAGMVG-------AD 232

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           GLG  + E+    + P  V   L +    + L+R
Sbjct: 233 GLGKNVVEAIATQNLPLGVEAGLGVVIIAVYLDR 266


>gi|62185329|ref|YP_220114.1| putative ABC transporter permease component [Chlamydophila abortus
           S26/3]
 gi|62148396|emb|CAH64163.1| putative ABC transporter permease component [Chlamydophila abortus
           S26/3]
          Length = 610

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +     L    +    +L P   ++Q  P+       V++F             A I   
Sbjct: 72  SIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL--------NAVIVPT 123

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +T ++YQ + + P +  E     + +  Q F  L +P ++P +   + ++M  
Sbjct: 124 ALTVFFPLTITIYQGITSTPEEFLEQFILHQATKQQIFIKLRLPHALPHIFSGLKIAMGS 183

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFR 261
             F  +A E +          G+G  I  + +  D+      +  +  + F L+  +L  
Sbjct: 184 AGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAGLFALTLLTFTLFQSILLI 237

Query: 262 PMIVWSNKFRLERTTGIYP 280
             + ++  FR+E+TT  Y 
Sbjct: 238 EKLTFA-LFRIEKTTKKYR 255



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  ++    +A ++ I + I +         + PF  L+   P     PL+V    +  
Sbjct: 57  TLQGILGGFFLALLLSIGLVILMLAYKPAKDLLNPFFILVQCTPMFTLAPLIVLWFGWGL 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +  +L + F     +   +  G ++ P +F E       T  + +  + LP   P+
Sbjct: 117 NAVIVPTALTVFF----PLTITIYQGITSTPEEFLEQFILHQATKQQIFIKLRLPHALPH 172

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   A G A  A+I  E  +        +GLG  I ES           G+  +   
Sbjct: 173 IFSGLKIAMGSAGFAAIAGEWLA------SQSGLGILILESRRNYDMEMTFAGLFALTLL 226

Query: 566 VLAL 569
              L
Sbjct: 227 TFTL 230


>gi|307130327|ref|YP_003882343.1| Taurine transport system permease tauC [Dickeya dadantii 3937]
 gi|306527856|gb|ADM97786.1| Taurine transport system permease protein tauC [Dickeya dadantii
           3937]
          Length = 288

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 93/230 (40%), Gaps = 12/230 (5%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDV--HSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
                   +  +P  +  +     D     LPQ  + +   +L   VI  +   + +TLA
Sbjct: 54  AAARWQNNDMMLPGFLQTLQAFQQDWLSGELPQKTAVSLGTLLKGYVIGSVLALLLSTLA 113

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
              +    +L  +  ++  +P +  L   +++F           E + +F +  S +W M
Sbjct: 114 VSVQLGRDLLALLTAMLNPLPAIALLPLALLWFGLG--------EKSLVFVLVHSVMWPM 165

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             + Y     +   L    R++ L+GW+    + +P ++P ++  + +  +  W  ++A+
Sbjct: 166 ALNAYSGFLGVSDTLRMAGRNYGLTGWRYVARILIPAALPAIISGLKIGWAFAWRTLIAA 225

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           E++    +     G+G YI     E     +   + +++ +  L + L+F
Sbjct: 226 ELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLASVILIGLLVEGLIF 273



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 6/201 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++  ++   +I S++ + +             +     +L   PA    PL +     
Sbjct: 89  AVSLGTLLKGYVIGSVLALLLSTLAVSVQLGRDLLALLTAMLNPLPAIALLPLALLWFGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    L  +++    W +  N  +G     +  +    ++ +TGWR+   I++P   
Sbjct: 149 GEKS----LVFVLVHSVMWPMALNAYSGFLGVSDTLRMAGRNYGLTGWRYVARILIPAAL 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G       AW   I +E+           GLG YI ++  +     V  G+  + 
Sbjct: 205 PAIISGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLASVI 262

Query: 564 CFVLALNRFLWHPLYLYGTRC 584
              L +   ++  L     R 
Sbjct: 263 LIGLLVEGLIFATLERLTVRK 283


>gi|256617563|ref|ZP_05474409.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           ATCC 4200]
 gi|256597090|gb|EEU16266.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           ATCC 4200]
          Length = 505

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 29/204 (14%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYA-TLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           + +L ++   +      +++ + L     A  L + S+    +L  +  I Q+IP     
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHSKLAESLLQ-VTGIFQTIPS---- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S 
Sbjct: 67  ----LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSK 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALA 232
            +K +   +  ++P ++  +             + ++++G       I   G+G++I L 
Sbjct: 123 KEKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLG 171

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD 256
           I   +L  I    L+   +  L++
Sbjct: 172 IDRNNLSLIFIGALSSAALAVLFN 195



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHSKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|255282445|ref|ZP_05347000.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255267029|gb|EET60234.1| taurine ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 261

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 11/199 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASIIWIPV 404
           + WF +  G A G ++     +V          V W    +    V +   +  +  +PV
Sbjct: 28  LVWFLLSIGEATGRSFPFADKVVPAVGTMVERGVFWKDIASSMTCVGIGFGLGFVTALPV 87

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
              + +   +   I+P+   +   PA  + PL+V               +L+   T   +
Sbjct: 88  AFLMAWYTPVQKIIEPWINFIRNIPALAYAPLLVITFGVGQK----PAVILIWICTFMTM 143

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
              +  G         + A       +  +  II P   P+ +T      G A    + +
Sbjct: 144 SITIYQGIKNIDVTLIKAARVLGANDFDIFWKIICPATVPFIITAIRLGLGAALTTLLAA 203

Query: 525 EVASWGHIHLRTTGLGAYI 543
           E            G+G  I
Sbjct: 204 E------STGAQAGIGMRI 216



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 97/254 (38%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +   LA +LV  +++I     +       +V  V   ++     +  + +   +     +
Sbjct: 20  LISFLAAMLVWFLLSIGEATGRSFPFADKVVPAVGTMVERGVFWKDIASSMTCVGIGFGL 79

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +     A L A    +  ++ P ++ +++IP L +    V+ F           +  A
Sbjct: 80  GFVTALPVAFLMAWYTPVQKIIEPWINFIRNIPALAYAPLLVITFGVG--------QKPA 131

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I+      M+ ++YQ + NI   L + +R    + +  FW +  P ++P ++  + +
Sbjct: 132 VILIWICTFMTMSITIYQGIKNIDVTLIKAARVLGANDFDIFWKIICPATVPFIITAIRL 191

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---Y 255
            +      ++A+E      +     GIG  I       +   +L  ++ +  +  +    
Sbjct: 192 GLGAALTTLLAAE------STGAQAGIGMRIRSLSNSFESAPMLMYIILLGIIGLILVKI 245

Query: 256 DQLLFRPMIVWSNK 269
             ++ R +  W  K
Sbjct: 246 VDIIERKLTGWQEK 259


>gi|221635738|ref|YP_002523614.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Thermomicrobium roseum DSM 5159]
 gi|221158182|gb|ACM07300.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Thermomicrobium roseum DSM 5159]
          Length = 269

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 97/230 (42%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +       ++  +   T  R+ +  ++  +   +   +A+ S  L +VL 
Sbjct: 54  LPSPVSVFRQLVTLFVDGTVWTHVGATLYRVTAGFLLGTVLALLLGLVASSSPVLRLVLR 113

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  I+ +  +  ++   +++F           + A IF      +  +  ++++++ ++
Sbjct: 114 DLSSILNATSVFVWIVLALIWFGL--------TDRAPIFTTLMITIPVLMSNVFEAIDSL 165

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++  +R +   +F ++  P  +P L   M ++ + G    V +E+  V      
Sbjct: 166 DRRLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFGVST---- 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             G+G  +  A       A+    L ++ ++ L D ++F P++ W  ++R
Sbjct: 222 --GVGYMMNFARDTLRTDAVFAWALILITMMLLVDNIIFSPLLRWLTRWR 269



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 10/226 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +    +       T      V      T++RV    ++ +++ + +G+     P +   
Sbjct: 52  YVLPSPVSVFRQLVTLFVDGTVWTHVGATLYRVTAGFLLGTVLALLLGLVASSSPVLRLV 111

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++  + +L A    V+  L +         P        +  T   ++ NV     +   
Sbjct: 112 LRDLSSILNATSVFVWIVLALIWFGLTDRAP----IFTTLMITIPVLMSNVFEAIDSLDR 167

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E+AS +  T    + +I  P + PY   G   A       S+V+E+         +T
Sbjct: 168 RLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFG------VST 221

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           G+G  +  + +      V    LI+   +L ++  ++ PL  + TR
Sbjct: 222 GVGYMMNFARDTLRTDAVFAWALILITMMLLVDNIIFSPLLRWLTR 267


>gi|330993876|ref|ZP_08317808.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Gluconacetobacter sp. SXCC-1]
 gi|329759144|gb|EGG75656.1| Putative aliphatic sulfonates transport permease protein ssuC
           [Gluconacetobacter sp. SXCC-1]
          Length = 254

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 20/250 (8%)

Query: 15  IFPNIFDLLAFVLVIGI----INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +   I      V++ G+    I +          P  +       +   +  Q    +  
Sbjct: 8   LLRPILGAAGLVVLFGVWEASIRLGWVPSGLLPAPTSLGPAWLEEVRSGAWTQAIRDSLT 67

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L+ ++   +   +   L      L  +L  ++ +++ IP L ++ F +++F     G 
Sbjct: 68  HYLTGLLAGSVLGTLLGLLCGAVPLLDGLLSGVVRVLRPIPGLAWVPFAILWFGLNTAG- 126

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSM 189
                  A F I  S  W   ++ Y ++ +I  DL EV+ SF   G W +   + +P S 
Sbjct: 127 -------ATFVIAISVFWINFYAAYGAVQSIDPDLYEVAASFGHGGFWARLRTVVIPASA 179

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++  +   +   W  VVA+E+  V       PGIG+ +  A        ++  MLTM 
Sbjct: 180 PGVLAGLRTGLGQAWMSVVAAELFGV-------PGIGARMMQASSLLATDLVVVYMLTMA 232

Query: 250 GVIFLYDQLL 259
            +  L D L 
Sbjct: 233 LLYALTDTLF 242



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 83/245 (33%), Gaps = 14/245 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFR 389
           L+         +L   W   +    +          +     ++V    W   I  ++  
Sbjct: 9   LRPILGAAGLVVLFGVWEASIRLGWVPSGLLPAPTSLGPAWLEEVRSGAWTQAIRDSLTH 68

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            +  ++  S++   +G+  G  P +   +    ++L   P   + P  +           
Sbjct: 69  YLTGLLAGSVLGTLLGLLCGAVPLLDGLLSGVVRVLRPIPGLAWVPFAILWFGL----NT 124

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVT 508
              + ++     W   +       +   D  EVA+SF   G W   R +++P   P  + 
Sbjct: 125 AGATFVIAISVFWINFYAAYGAVQSIDPDLYEVAASFGHGGFWARLRTVVIPASAPGVLA 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  T  G AW + + +E+           G+GA + +++   +   VV+ +L M      
Sbjct: 185 GLRTGLGQAWMSVVAAELFG-------VPGIGARMMQASSLLATDLVVVYMLTMALLYAL 237

Query: 569 LNRFL 573
            +   
Sbjct: 238 TDTLF 242


>gi|291303050|ref|YP_003514328.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290572270|gb|ADD45235.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 265

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 92/262 (35%), Gaps = 13/262 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            IR      + +L +      +  + W  V    ++         +           ++ 
Sbjct: 5   AIRPRRRVPWARLLATPLSLAIGALAWEIVGQAASVRFFPPLSAVLARLAEMVGNGQILA 64

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++  +V+   I+ +  + +G  +G    + + +  +   L   P+ VF P+  S +
Sbjct: 65  NLGDSLVNLVLGFGISLVGGLVIGAAMGRYRKVEAALGVYVYALLTAPSLVFAPIFFSLL 124

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +    +  +++    + I+ N  +   + P    E+A S+  + W+    I+LP 
Sbjct: 125 GEGRAS----IVAVVVTYAMFVIVINTASAMRSVPGHLIEMARSYGASEWQILTRIMLPA 180

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G     G A    I  E+       +   GLG  + ++  +     V+  +L+
Sbjct: 181 ATPMIMAGVRLGVGRAVIGMINGEMF------IAVVGLGRVVTQAGGRFDGAGVLAVLLV 234

Query: 562 MCCFVLALNRFLW---HPLYLY 580
           +    LA    +      L  +
Sbjct: 235 IIAVALAAVGLVQAVDRRLTRW 256



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASR 67
            RR+           L IG +   + G   +      +  V   L        +      
Sbjct: 9   RRRVPWARLLATPLSLAIGALAWEIVGQAASVRFFPPLSAVLARLAEMVGNGQILANLGD 68

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + + ++    ISL+   V      + R++   L   +  + + P L F      +F  L 
Sbjct: 69  SLVNLVLGFGISLVGGLVIGAAMGRYRKVEAALGVYVYALLTAPSLVFAPI---FFSLLG 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+      + +  + T  ++ +  +   ++ ++P  L E++RS+  S WQ    + +P 
Sbjct: 126 EGR-----ASIVAVVVTYAMFVIVINTASAMRSVPGHLIEMARSYGASEWQILTRIMLPA 180

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  + + +      ++  EM       I + G+G  +  A    D   +L  +L 
Sbjct: 181 ATPMIMAGVRLGVGRAVIGMINGEMF------IAVVGLGRVVTQAGGRFDGAGVLAVLLV 234

Query: 248 MLGVIFL---YDQLLFRPMIVW 266
           ++ V        Q + R +  W
Sbjct: 235 IIAVALAAVGLVQAVDRRLTRW 256


>gi|296128154|ref|YP_003635404.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296019969|gb|ADG73205.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 261

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 86/229 (37%), Gaps = 11/229 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVA-IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +       +  +L + W     G   + +   +        T+ D   +      ++ R 
Sbjct: 9   VPAAYAAGLPLLLVVGWALATQGTTNLYLPSPARVLQAFTRTWLDPDTLTGDVLPSLGRF 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V ++++ +I I  G  IG  P + + ++P  +   A P  V    +V  +       + 
Sbjct: 69  AVGVLLSIVIGIVAGTAIGATPWLRALLEPMLEFFRAIPPVV----LVPVLMLLLGIDDS 124

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +++ G+ W +L N + G         + + S+ + G   +RY++LP   P  + G 
Sbjct: 125 MKLAVIVSGSVWPVLLNTVEGVRGTDPVLVDTSRSYRVRGLLAYRYVVLPAASPQIMAGI 184

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                      ++SE+ +       ++GLG  I     +    E+  G+
Sbjct: 185 RLCLSIGLILMVISEMFA------SSSGLGYQIVYFQRQYMVAEMWGGI 227



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 107/264 (40%), Gaps = 23/264 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPIT---LDVHSLPQYAS 66
           ++RR+           L++ +   L   G     +P     +   T   LD  +L     
Sbjct: 3   VARRVLVPAAYAAGLPLLLVVGWALATQGTTNLYLPSPARVLQAFTRTWLDPDTLTGDVL 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +  R    +++S++   V  T    +  L  +L P+L+  ++I          V  + +
Sbjct: 63  PSLGRFAVGVLLSIVIGIVAGTAIGATPWLRALLEPMLEFFRAI--------PPVVLVPV 114

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +   +   +  I +  VW +  +  + +      L + SRS+R+ G   + Y+ +P
Sbjct: 115 LMLLLGIDDSMKLAVIVSGSVWPVLLNTVEGVRGTDPVLVDTSRSYRVRGLLAYRYVVLP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P ++  + + +S G   +V SEM           G+G  I    + Q ++A ++  +
Sbjct: 175 AASPQIMAGIRLCLSIGLILMVISEMFASSS------GLGYQIVY-FQRQYMVAEMWGGI 227

Query: 247 TMLGVIFLYD----QLLFRPMIVW 266
            +LGV+ +      QL+ R ++ W
Sbjct: 228 LLLGVVGVVVAAVFQLVERRVLHW 251


>gi|148379346|ref|YP_001253887.1| ABC transporter permease [Clostridium botulinum A str. ATCC 3502]
 gi|153932069|ref|YP_001383721.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|153935138|ref|YP_001387270.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. Hall]
 gi|148288830|emb|CAL82914.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|152928113|gb|ABS33613.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|152931052|gb|ABS36551.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. Hall]
          Length = 253

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              ++ S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   RKNKIISKLVRRTLIIIFWAFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ ++ I +GI  G    +   ++P    + A P      + +  +   
Sbjct: 67  KSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWLK-- 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 125 SSSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 98/228 (42%), Gaps = 9/228 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +  +  + ++ ++       P+ + + + I            ++ +R++  ++IS++
Sbjct: 22  IIFWAFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISIV 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +A  +  +  +L P++  +++ P++  +   +V+         + +   AIF 
Sbjct: 82  LGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVW---------LKSSSVAIFT 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++   + ++ + L E++  + +        + +P + P ++  ++M + 
Sbjct: 133 SILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            GW   VASE++      I L  + +   LA +E     I+  +L+++
Sbjct: 193 IGWKVSVASEVLSTPRYSIGLNLLNAKATLATEELFAWTIVVVLLSLI 240


>gi|77164065|ref|YP_342590.1| ABC transporter inner membrane/substrate-binding proteins
           [Nitrosococcus oceani ATCC 19707]
 gi|254435500|ref|ZP_05049007.1| ABC transporter, QAT family, substrate-binding protein
           [Nitrosococcus oceani AFC27]
 gi|300115080|ref|YP_003761655.1| glycine betaine ABC transporter substrate-binding protein
           [Nitrosococcus watsonii C-113]
 gi|76882379|gb|ABA57060.1| ABC transporter, fused inner membrane component and
           substrate-binding domain [Nitrosococcus oceani ATCC
           19707]
 gi|207088611|gb|EDZ65883.1| ABC transporter, QAT family, substrate-binding protein
           [Nitrosococcus oceani AFC27]
 gi|299541017|gb|ADJ29334.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Nitrosococcus watsonii C-113]
          Length = 501

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 20/207 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++     + +  ++  +++       +AA   RLG +++ I  I+Q+IP L  L F +  
Sbjct: 301 RHTKEHLVLVGISLTSAIVVAIPLGVIAAYRPRLGSIILSIAGIIQTIPALALLVFMIPL 360

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P         A+ A+F   +  +  + +  L +I   L E + +  LS   +   
Sbjct: 361 LGIGGPP--------AVVALFLYSLLPILRNTHTGLHDISPQLRESAVALGLSTGARLRL 412

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   ++  +  S       V+      +G  +I   G G  I   I+  D+  IL
Sbjct: 413 VELPMASRAILAGIKTS------AVINVGTATLG-ALIGAGGYGQPILTGIRLDDVSLIL 465

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              +   G+  L   L       W+++
Sbjct: 466 EGAIPAAGLAMLVQGLF-----EWADR 487



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 5/205 (2%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q+ G+                    +  V + +  A ++ IP+G+   +RP + S I   
Sbjct: 282 QTFGHRPQASPVTAWQRFYRHTKEHLVLVGISLTSAIVVAIPLGVIAAYRPRLGSIILSI 341

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A ++   PA      ++  +            + +   +   IL N   G        +E
Sbjct: 342 AGIIQTIPALALLVFMIPLLGIGG----PPAVVALFLYSLLPILRNTHTGLHDISPQLRE 397

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTGLG 540
            A +  ++     R + LP      + G  T+       + +  +   G       TG+ 
Sbjct: 398 SAVALGLSTGARLRLVELPMASRAILAGIKTSAVINVGTATLGALIGAGGYGQPILTGIR 457

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCF 565
                   +G+ P   L +L+   F
Sbjct: 458 LDDVSLILEGAIPAAGLAMLVQGLF 482


>gi|312127760|ref|YP_003992634.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor hydrothermalis 108]
 gi|311777779|gb|ADQ07265.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor hydrothermalis 108]
          Length = 253

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 96/221 (43%), Gaps = 14/221 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +++     L  ++L      T  RML   +I+++   V      KS  L   L P
Sbjct: 34  PSPISVIETFVRLLSDNTLTVAMIATVRRMLIGYLIAVVIGVVVGLAIVKSEFLDKNLRP 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q++P + +L F ++++          +E A IF      ++++T ++   + N+ 
Sbjct: 94  LILGFQTLPSVCWLPFAILWYGL--------SEKAIIFVTAIGSIFSITLAVESGIKNVN 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               + +++   +G + +  + +P S+P ++  M    S  +  ++A EM+         
Sbjct: 146 PLYIKAAKTMGATGLRLYLNVIIPASLPYVISGMKQGWSFAFRALMAGEML------FAT 199

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G  + +     D+  ++  M+  +    + ++ +F P+
Sbjct: 200 KGLGQVLMVGRDLADMSQVISVMIVTIIFGLVVEKAIFGPL 240



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 78/199 (39%), Gaps = 10/199 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+ R+++  +IA +I + VG+ I     +   ++P        P+  + P  +
Sbjct: 52  LTVAMIATVRRMLIGYLIAVVIGVVVGLAIVKSEFLDKNLRPLILGFQTLPSVCWLPFAI 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  +   G+ + I   V +G       + + A +   TG R +  +I
Sbjct: 112 LWYGLSEK----AIIFVTAIGSIFSITLAVESGIKNVNPLYIKAAKTMGATGLRLYLNVI 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY ++G       A+ A +  E+         T GLG  +    +     +V+  
Sbjct: 168 IPASLPYVISGMKQGWSFAFRALMAGEML------FATKGLGQVLMVGRDLADMSQVISV 221

Query: 559 VLIMCCFVLALNRFLWHPL 577
           +++   F L + + ++ PL
Sbjct: 222 MIVTIIFGLVVEKAIFGPL 240


>gi|288957394|ref|YP_003447735.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288909702|dbj|BAI71191.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 275

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +   SL      +  R+    V+      +             V V
Sbjct: 61  LPPPSAVARALAGMVADGSLWLNLKASLARIAVGWVLGTAAGMLVGFSMGIFSTARAVGV 120

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++     IP +  L   +++F    P K         F            + Y ++  +
Sbjct: 121 PLVSAFFPIPKIALLPLFILWFGIGEPSKFATIGFGVFF--------PTVIATYSAIDQV 172

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PR+L  +++SF L        + +P ++PG++    ++ S     VVA+EMI        
Sbjct: 173 PRNLIRMAQSFGLPWRAILRSIVLPGALPGILAGFRITASIALILVVAAEMIG------A 226

Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             GIG+++ +A   ++   LLA +  +  +   I      L R ++ W
Sbjct: 227 EYGIGAFVLMAGNLMQTDTLLAGVLVLSLLGLAIGTVLSQLERRLLNW 274



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ V  ++ +   + VG  +G      +   P        P     PL +      
Sbjct: 86  ASLARIAVGWVLGTAAGMLVGFSMGIFSTARAVGVPLVSAFFPIPKIALLPLFILWFGIG 145

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +     FG  +  +    +     P +   +A SF +      R I+LPG  P
Sbjct: 146 EPSKFATIG----FGVFFPTVIATYSAIDQVPRNLIRMAQSFGLPWRAILRSIVLPGALP 201

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             + G       A    + +E+           G+GA++  +        ++ 
Sbjct: 202 GILAGFRITASIALILVVAAEMIG------AEYGIGAFVLMAGNLMQTDTLLA 248


>gi|126733030|ref|ZP_01748788.1| putative ABC transporter protein [Sagittula stellata E-37]
 gi|126706513|gb|EBA05592.1| putative ABC transporter protein [Sagittula stellata E-37]
          Length = 250

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 96/250 (38%), Gaps = 14/250 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +++  +   L         P  ++           LP +   T LR++ A  +++ 
Sbjct: 13  LFGLLVLWVVAAWLTADATVLPQPWSLLRPFWRETVSGELPYHLGATLLRVVWAFTLAMA 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +  +   +   L P L I  ++P L  +    ++            E AAI A
Sbjct: 73  IGVTLGLVMGRYPAVNHWLDPWLVIFLNLPALVLIVLCYLWIGLN--------ETAAILA 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +++ N+   + +    +   ++ +++ +R+S W +  ++ +P   P +       ++
Sbjct: 125 VTLNKIPNVATVIREGARALDPQIDAMAKVYRMSAWARLRHVTLPQLAPFIAAAARSGIA 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  V+  E +          G+G  I L  +  D+  +L    + + V+ + + L+ +
Sbjct: 185 VIWKIVLVVEFLG------RSSGVGFQIHLYFQLFDVRMVLVYAFSFITVMLVVEWLVLQ 238

Query: 262 PMIVWSNKFR 271
           P      ++R
Sbjct: 239 PWERRVRRWR 248



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 82/243 (33%), Gaps = 11/243 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASII 400
           + L + W       A          ++  F  + V   + +    T+ RVV    +A  I
Sbjct: 14  FGLLVLWVVAAWLTADATVLPQPWSLLRPFWRETVSGELPYHLGATLLRVVWAFTLAMAI 73

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +G+ +G  P ++  + P+  +    PA V   L    +            L +    
Sbjct: 74  GVTLGLVMGRYPAVNHWLDPWLVIFLNLPALVLIVLCYLWIGL----NETAAILAVTLNK 129

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +   +  GA A       +A  + ++ W   R++ LP + P+    A +     W  
Sbjct: 130 IPNVATVIREGARALDPQIDAMAKVYRMSAWARLRHVTLPQLAPFIAAAARSGIAVIWKI 189

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
            +V E         R++G+G  I    +      V++        +L +   +  P    
Sbjct: 190 VLVVEFLG------RSSGVGFQIHLYFQLFDVRMVLVYAFSFITVMLVVEWLVLQPWERR 243

Query: 581 GTR 583
             R
Sbjct: 244 VRR 246


>gi|297626297|ref|YP_003688060.1| Binding-protein-dependent transport systems inner membrane
           component [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922062|emb|CBL56626.1| Binding-protein-dependent transport systems inner membrane
           component [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 296

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 12/251 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-- 378
                H     +++ +   V  +L + W  VV    + +        V      D+++  
Sbjct: 4   SRFTRHPAPTGVRIGAPLVVGALLLLAWHAVVSTHTVPLTLLPTPGSVWSRLVHDIVHGE 63

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     T++  V+  I+A++  +PVG  +       + I P+     A PA    PL+V
Sbjct: 64  LLARTATTIWEAVLGCIVATVFALPVGYLVARVRLAEAAISPYLAASQAIPAVALAPLLV 123

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V Y      L  SL++ F     +L + + G  +  ++  E A     +GWR  RYI 
Sbjct: 124 IWVGYGLTPIVLLCSLIVFF----PLLLSTVLGLRSIDHEVVEAAELDGASGWRMIRYIE 179

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P      ++G       +   ++V E    G      TGLG  ++  +       +   
Sbjct: 180 APLSRAALLSGVRNGFTLSVTGAVVGEFVMGG------TGLGLVVSMQSASADTTGLFST 233

Query: 559 VLIMCCFVLAL 569
           ++++C   + +
Sbjct: 234 LIVLCVLAMVI 244



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 16/281 (5%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +   P     RI   +      +L    +++     +     P  +   +   +    L 
Sbjct: 6   FTRHPAPTGVRIGAPLVVGALLLLAWHAVVSTHTVPLTLLPTPGSVWSRLVHDIVHGELL 65

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
              + T    +   +++ +F      L A+ R     + P L   Q+IP +      V++
Sbjct: 66  ARTATTIWEAVLGCIVATVFALPVGYLVARVRLAEAAISPYLAASQAIPAVALAPLLVIW 125

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                   V+   L   F         +  S    L +I  ++ E +     SGW+   Y
Sbjct: 126 VGYGLTPIVLLCSLIVFF--------PLLLSTVLGLRSIDHEVVEAAELDGASGWRMIRY 177

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P S   L+  +    +      V  E ++ G       G+G  +++     D    L
Sbjct: 178 IEAPLSRAALLSGVRNGFTLSVTGAVVGEFVMGGT------GLGLVVSMQSASADTT-GL 230

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
           ++ L +L V+ +   L    +  +++ +R+ R     P ++
Sbjct: 231 FSTLIVLCVLAMVIYLGLIAVERFTDPYRVPRAAHPVPLET 271


>gi|325689872|gb|EGD31876.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK115]
          Length = 506

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLQSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLQSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|257869324|ref|ZP_05648977.1| glycine betaine transporter [Enterococcus gallinarum EG2]
 gi|257803488|gb|EEV32310.1| glycine betaine transporter [Enterococcus gallinarum EG2]
          Length = 514

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 70/166 (42%), Gaps = 15/166 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           +R+   ++ I  I+Q+IP L  L   + +             + A+ A+    +  +  +
Sbjct: 51  KRMAEFVLQITSILQTIPSLALLGLLIPFVGIG--------TVPALIALVVYALLPIFQN 102

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  L  I   +EE + +F +S  +K + + +P +MP ++  +  ++         + +I
Sbjct: 103 TYIGLSEIDPSIEEAADAFGMSRLRKLFKVELPIAMPVIISGVRTALVLIIGTATLAALI 162

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G       G+G++I L I   D    L   ++   +  L+  L+
Sbjct: 163 GAG-------GLGTFILLGIDRNDPSLTLIGAVSSALLAILFSGLI 201



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             ++  +     +L   P+     L++  V    +   + L +  +      I  N   G
Sbjct: 51  KRMAEFVLQITSILQTIPSLALLGLLIPFVGIGTVPALIALVVYALL----PIFQNTYIG 106

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S      +E A +F ++  R    + LP   P  ++G  TA       + ++ +   G 
Sbjct: 107 LSEIDPSIEEAADAFGMSRLRKLFKVELPIAMPVIISGVRTALVLIIGTATLAALIGAG- 165

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLG +I    ++      ++G +      +  +  +
Sbjct: 166 ------GLGTFILLGIDRNDPSLTLIGAVSSALLAILFSGLI 201


>gi|78063458|ref|YP_373366.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77971343|gb|ABB12722.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 262

 Score = 91.1 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 14/256 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYA 65
            P    RR    +      V      +      Q   VP   V    + L     L    
Sbjct: 8   FPFAALRRRARGLVVPALLVAAWQYASSGDAAHQYAFVPLQQVCAALVELARSGELATDL 67

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R    +   + F  V+    A+S     +  P    ++ +P+LG +    ++   
Sbjct: 68  GASLRRTTLGLAAGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSLWAGT 127

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A +F I  +  + MT + +  L  +     E+++S+RL+    +  + +
Sbjct: 128 G--------EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLI 179

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P L   ++ ++   W    +SE++          G+GS +  A        +L  +
Sbjct: 180 PGALPDLFAGVLQAVPFAWITATSSELLFNAGA-----GVGSLMQNAQAGARADVLLVCV 234

Query: 246 LTMLGVIFLYDQLLFR 261
           L +  +      L  R
Sbjct: 235 LGVTALAVGMSALCER 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 70/253 (27%), Gaps = 11/253 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYV 379
            +         +      V  +L   W     G A                        +
Sbjct: 4   ALPAFPFAALRRRARGLVVPALLVAAWQYASSGDAAHQYAFVPLQQVCAALVELARSGEL 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 ++ R  + +       +  G  +          +P  Q L   P     PL+  
Sbjct: 64  ATDLGASLRRTTLGLAAGVAFGLVFGAAMARSTLARKLGEPAFQALRYVPLLGLIPLLSL 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                          ++     + +      G       + E+A S+ +T    WR +++
Sbjct: 124 WAGTG----EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLI 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           PG  P    G + A   AW  +  SE+           G+G+ +  +        +++ V
Sbjct: 180 PGALPDLFAGVLQAVPFAWITATSSELLFNAG-----AGVGSLMQNAQAGARADVLLVCV 234

Query: 560 LIMCCFVLALNRF 572
           L +    + ++  
Sbjct: 235 LGVTALAVGMSAL 247


>gi|153832682|ref|ZP_01985349.1| ABC transporter permease protein [Vibrio harveyi HY01]
 gi|148871027|gb|EDL69911.1| ABC transporter permease protein [Vibrio harveyi HY01]
          Length = 266

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L   
Sbjct: 32  AVILGLWQLVVVIFDMPSFILPSPIEVLDRLVTRYDVLLKHTWVTAQEILLGLALGLSMG 91

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F + 
Sbjct: 92  LLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVT 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++   
Sbjct: 152 TCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV--- 200

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   L 
Sbjct: 201 ---VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL 257

Query: 261 RPMIVWSNK 269
           +  I W +K
Sbjct: 258 KKAIPWESK 266



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAV 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|91780224|ref|YP_555431.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692884|gb|ABE36081.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 292

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 99/258 (38%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF---DLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLP 62
           P  + +R+    +    L+A VL+ G          +  +P            +    L 
Sbjct: 30  PLPLGKRLLAQSWLRKTLIALVLIAGWEVAARVVDNDLLLPTFGATFSAFVQGVWSGELL 89

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  + +   +L   ++     FV  +LA  +R    +L  +  +   +P +  L   +++
Sbjct: 90  QKTAVSMSVLLRGYLLGAALAFVLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPLALLW 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +F +  S +W +  + Y    ++P  L    R++ L+G +    
Sbjct: 150 FGLGTG--------SLLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLL 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP ++P ++  + +  +  W  ++A+E++    +       G YI     E     + 
Sbjct: 202 ILVPAALPSILAGLRVGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYTDRVF 259

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +  ++ +  L + L+F
Sbjct: 260 AGLAAVIVIGLLIEHLVF 277



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 12/294 (4%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              L  +         PL   V +    LG                  ++ +L   W   
Sbjct: 5   ATLLPPVREEYERPLEPLGELVLEAPLPLGKRLL-----AQSWLRKTLIALVLIAGWEVA 59

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
              V   +   + G   + F        ++    ++M  ++   ++ + +   +      
Sbjct: 60  ARVVDNDLLLPTFGATFSAFVQGVWSGELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVS 119

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  +     +    P+    PL +        +    L  +++    W +  N  +
Sbjct: 120 TRVGRDLLSMLTAMFNPLPSIALLPLALLWFGLGTGS----LLFVLVHSVLWPLALNTYS 175

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  + P   +    ++ +TG R    I++P   P  + G       AW   I +E+    
Sbjct: 176 GFQSVPATLRMTGRNYGLTGMRHVLLILVPAALPSILAGLRVGWAFAWRTLIAAELVFGA 235

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                    G YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 236 SSGSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLIEHLVFDTLERITVRR 287


>gi|323499592|ref|ZP_08104561.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sinaloensis DSM 21326]
 gi|323315332|gb|EGA68374.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sinaloensis DSM 21326]
          Length = 266

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 16/225 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++ +          P D++D +    D+  L ++   T   +L  + + L    ++A   
Sbjct: 41  VVVVFAMPSFILPAPIDVLDRLISRHDI--LLKHTWVTAQEILLGLALGLSMGLLFALQM 98

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
                L   L+PIL   Q+IP+       +++       KV+ A +   F + T      
Sbjct: 99  LMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVTTCC---- 154

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
               Y  L N P    +++++   S WQ+  ++ +P ++P L   + +++      V+A 
Sbjct: 155 ----YDGLRNTPTGYLDLAKTMGASKWQRLRHIQLPAALPTLASGIRVAV------VIAP 204

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              VVG+ V    G+G  +  A     +  +  A+  +  +    
Sbjct: 205 IGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAALSIAL 249



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 81/221 (36%), Gaps = 12/221 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             VV  +   I    I  +    +  D+L  +    +T   +++ + +   + +   + +
Sbjct: 41  VVVVFAMPSFILPAPIDVLDRLISRHDIL--LKHTWVTAQEILLGLALGLSMGLLFALQM 98

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   + P      A P     P+++  + Y   +  +  ++++ F     +    
Sbjct: 99  LMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCC 154

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G    P  + ++A +   + W+  R+I LP   P   +G   A   A   ++V E   
Sbjct: 155 YDGLRNTPTGYLDLAKTMGASKWQRLRHIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG 214

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  + ++  +    E+   + I+    +AL
Sbjct: 215 ------SSEGLGYLMLQANARMIIDEMFAALFILAALSIAL 249


>gi|261406189|ref|YP_003242430.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261282652|gb|ACX64623.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 277

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   T    +   ++  L   + A L   S  L  VL P + +  S+P +     
Sbjct: 80  GELWGHLGVTVGETVVGFLLGTLVGTLMAVLIWWSPFLNKVLDPYMVVFNSMPKVALGPI 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F   +         A +    +  V   T  +Y S   +  +L +V R+F  +  Q
Sbjct: 140 FIVMFGAGFT--------AIVVTTLSITVIVTTLVVYNSFNEVDSNLIKVVRTFGGTKRQ 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S P +V  + +++   W  V+  E +V         G+G  I    +  + 
Sbjct: 192 VFQRVILPASYPAIVSTLKVNVGMAWVGVIVGEFLVAKS------GLGYLIMYGFQVFNF 245

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L +  V     Q++
Sbjct: 246 TLVLSSLLIIAVVATAMYQIV 266



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   VV  ++ +++   + + I + P ++  + P+  +  + P     P+ +     
Sbjct: 87  GVTVGETVVGFLLGTLVGTLMAVLIWWSPFLNKVLDPYMVVFNSMPKVALGPIFIVMFGA 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +    + +  T       V    +   ++  +V  +F  T  + ++ +ILP  +
Sbjct: 147 GFTAIVVTTLSITVIVT----TLVVYNSFNEVDSNLIKVVRTFGGTKRQVFQRVILPASY 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V+      G AW   IV E        +  +GLG  I    +  +F  V+  +LI+ 
Sbjct: 203 PAIVSTLKVNVGMAWVGVIVGEFL------VAKSGLGYLIMYGFQVFNFTLVLSSLLIIA 256

Query: 564 CFVLALNRFL 573
               A+ + +
Sbjct: 257 VVATAMYQIV 266


>gi|153953666|ref|YP_001394431.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346547|gb|EDK33083.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
          Length = 262

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 66/165 (40%), Gaps = 10/165 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+   +    +P  ++ +     + F + +  +        +   +++ +   W I+FN 
Sbjct: 85  GWFSKLELIAEPVIEIFSQVNPFILFHVALLFLGIG----EITKVVVIAWTCIWPIMFNT 140

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           I G     +   + A  F +  W+ +  +++P I P    G   + G ++   I +E+  
Sbjct: 141 IYGIRNMDSLILKAARGFGLKRWKLFYKVVIPSILPSVFVGIRISAGYSFFMLIAAEMMG 200

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++GLG  I  + E  +  ++    +++    L ++  +
Sbjct: 201 ------ASSGLGWLILNNQENYAINKIFAVAIVIAILGLFVDIII 239



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L     +L ++  P+++I   +         +++            E+  +  I  + +W
Sbjct: 83  LGGWFSKLELIAEPVIEIFSQVNPFILFHVALLFLGIG--------EITKVVVIAWTCIW 134

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            + F+    + N+   + + +R F L  W+ F+ + +P  +P +   + +S    +F ++
Sbjct: 135 PIMFNTIYGIRNMDSLILKAARGFGLKRWKLFYKVVIPSILPSVFVGIRISAGYSFFMLI 194

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           A+EM+          G+G  I    +   +  I    + +  +    D ++
Sbjct: 195 AAEMMGASS------GLGWLILNNQENYAINKIFAVAIVIAILGLFVDIII 239


>gi|295698942|ref|YP_003606835.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295438155|gb|ADG17324.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 292

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 91/238 (38%), Gaps = 10/238 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +    I   +++           +      +    L    + +   +L   ++   F
Sbjct: 50  LVLIAAWEIAARVINNDLLLPTFGATLSAFVQGVCSGELLAKTAVSMSVLLRGYLLGAGF 109

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+  +LA  +R    +L  +  +   +P +  L   +++F             + +F +
Sbjct: 110 AFMLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPLALLWFGLGTG--------SLLFVL 161

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +W +  + Y    ++P  L+   R++ L+G +    + VP ++P ++  + +  + 
Sbjct: 162 VHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALPSILAGLRVGWAF 221

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            W  ++A+E++    +       G YI     E     +   +  ++ +  L + L+F
Sbjct: 222 AWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLVF 277



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 81/277 (29%), Gaps = 16/277 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L        E  L           L      +V   A  IA + I   +   T+   L
Sbjct: 17  RPLEAPGDLAIEAPLPAAGRIFAHGWLRKSLIALVLIAAWEIAARVINNDLLLPTFGATL 76

Query: 378 YVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                G           ++M  ++   ++ +     +             +     +   
Sbjct: 77  SAFVQGVCSGELLAKTAVSMSVLLRGYLLGAGFAFMLTSLAVSTRVGRDLLSMLTAMFNP 136

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    PL +        +    L  +++    W +  N  +G  + P   K    ++ 
Sbjct: 137 LPSIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALNTYSGFQSVPATLKMTGRNYG 192

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +TG R    I++P   P  + G       AW   I +E+             G YI ++ 
Sbjct: 193 LTGLRHVLLILVPAALPSILAGLRVGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNR 250

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +     V  G+  +    L +   ++  L     R 
Sbjct: 251 NELYTDRVFAGLAAVIVIGLLVEHLVFDTLERVTVRR 287


>gi|257083604|ref|ZP_05577965.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           Fly1]
 gi|256991634|gb|EEU78936.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           Fly1]
 gi|327534265|gb|AEA93099.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis OG1RF]
          Length = 505

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    ++   +  L++
Sbjct: 173 DRNNLSLIFIGAISSAALAVLFN 195



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G +      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGAISSAALAVLFN 195


>gi|322385502|ref|ZP_08059146.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
 gi|321270240|gb|EFX53156.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
          Length = 506

 Score = 90.8 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKAANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|227517637|ref|ZP_03947686.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
 gi|227074894|gb|EEI12857.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecalis TX0104]
          Length = 505

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|159046711|ref|YP_001542379.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157914470|gb|ABV95898.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 253

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+  + +   +A I+ IP GI +G  P     +QP+   + + P  V  PL+V      
Sbjct: 61  ITVQALFLGYFLAVIVGIPFGIAMGALPRFGDILQPYLYAIFSTPRVVVVPLIVVWFGIG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+ F +   I  N   G      D  EVA SF  +  +  R++++PG  P
Sbjct: 121 F----EARLFLVFFWSMIAISVNTAQGVRHARPDLVEVAHSFQASRLQMARHVLIPGAIP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + V+G       A    I+ E+       L+  GLG  I + + +    +++  V ++  
Sbjct: 177 FVVSGLRIGAERAIVGVIIGEMF------LQIVGLGGVITKGSTELLPAKMLCAVAVIAV 230

Query: 565 FVLAL 569
               +
Sbjct: 231 LGTII 235



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P ++       +    L      T   +     ++++    +        R G +L P
Sbjct: 37  APPSEVARQFGELMRSGELLDATKITVQALFLGYFLAVIVGIPFGIAMGALPRFGDILQP 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  + S P +  +   VV+F   +         A +F +F   +  ++ +  Q + +  
Sbjct: 97  YLYAIFSTPRVVVVPLIVVWFGIGF--------EARLFLVFFWSMIAISVNTAQGVRHAR 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            DL EV+ SF+ S  Q   ++ +P ++P +V  + +        V+  EM       + +
Sbjct: 149 PDLVEVAHSFQASRLQMARHVLIPGAIPFVVSGLRIGAERAIVGVIIGEMF------LQI 202

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I     E     +L A+  +  +  +    L
Sbjct: 203 VGLGGVITKGSTELLPAKMLCAVAVIAVLGTIIVTAL 239


>gi|163792395|ref|ZP_02186372.1| ABC transporter, membrane spanning protein [alpha proteobacterium
           BAL199]
 gi|159182100|gb|EDP66609.1| ABC transporter, membrane spanning protein [alpha proteobacterium
           BAL199]
          Length = 256

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 15/212 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q    V+    +T++  +V   +A    I +G+ +G+   I   I P        P    
Sbjct: 47  QYWRPVLRHSLVTLWTTMVGFGLAVAFGIVLGLIVGWSRTIYRGIYPVMIGFNTIPKVAV 106

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++V           +   L     + + I+ NV  G +    + ++V  +        
Sbjct: 107 VPILVIWFGIG----EVPAILTAFLISFFPIVVNVATGLATMEPELEDVLRALGARKLDI 162

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   PY       A   A+  S+VSE  +         G+G  +A++      P
Sbjct: 163 MLKVGIPRALPYLFGSLKVAITLAFVGSVVSETIA------ANAGIGFLMAQAGSNFQMP 216

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            V  G++ +    +A+     + L+    R +
Sbjct: 217 LVFAGLMALAVEGIAM-----YALFALVERRM 243



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 19/259 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P  F +  F +      +L         P +++  +        + +++  T    +
Sbjct: 7   RLVPLWFTIGLFAVWEATCRLLDVDPFILPAPSEVLAALVQYWRP--VLRHSLVTLWTTM 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +++ F  V   +   SR +   + P++    +IP +  +   V++F          
Sbjct: 65  VGFGLAVAFGIVLGLIVGWSRTIYRGIYPVMIGFNTIPKVAVVPILVIWFGIG------- 117

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E+ AI   F    + +  ++   L  +  +LE+V R+           +G+P ++P L 
Sbjct: 118 -EVPAILTAFLISFFPIVVNVATGLATMEPELEDVLRALGARKLDIMLKVGIPRALPYLF 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++  +   V SE I          GIG  +A A     +  +   ++ +     
Sbjct: 177 GSLKVAITLAFVGSVVSETIAANA------GIGFLMAQAGSNFQMPLVFAGLMALAVEGI 230

Query: 254 LYD---QLLFRPMIVWSNK 269
                  L+ R M  W+ +
Sbjct: 231 AMYALFALVERRMTRWAFR 249


>gi|282601208|ref|ZP_05981080.2| taurine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282569703|gb|EFB75238.1| taurine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 261

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  L A ++V  I++++    +        +  + +  D   L      + + + +  +I
Sbjct: 19  LISLAAALVVWTILSVIPVTSRSFPNVIVTIQEIKVMYDRGVLLTDIGSSLISVFAGYLI 78

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             + +   A L A    +  +L P +  +++IP L ++   V+        +        
Sbjct: 79  GFIISLPVAILMAWYVPVRNILQPWISFIRNIPPLAYVPLIVLSAGIGRRPQ-------- 130

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +    M  ++YQ + NI   L   +R         F  +  P S+P ++  + +
Sbjct: 131 IITITIATFLIMCITIYQGVMNIDDTLIRAARVLGAKDRDIFIRVIAPASLPFIMTAIRL 190

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---Y 255
             S     ++A+E      +   + G+G  I       D   +L  ++ +  +  +    
Sbjct: 191 GASTALTTLIAAE------STGAMAGLGMRIRTLNANFDTDPMLLYIIIIGIIGLIIEKV 244

Query: 256 DQLLFRPMIVWSNK 269
                R +  W  K
Sbjct: 245 IDFAERKLTGWQEK 258



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 16/225 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRV 390
             +V  ++ +    VV  +   I   S  +     T Q++  +   G +      ++  V
Sbjct: 13  PTKVWLLISLAAALVVWTILSVIPVTSRSFPNVIVTIQEIKVMYDRGVLLTDIGSSLISV 72

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
               +I  II +PV I + +   + + +QP+   +   P   + PL+V            
Sbjct: 73  FAGYLIGFIISLPVAILMAWYVPVRNILQPWISFIRNIPPLAYVPLIVLSAGIGRRPQ-- 130

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   T   +   +  G     +     A          +  +I P   P+ +T  
Sbjct: 131 --IITITIATFLIMCITIYQGVMNIDDTLIRAARVLGAKDRDIFIRVIAPASLPFIMTAI 188

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
                 A    I +E            GLG  I           +
Sbjct: 189 RLGASTALTTLIAAE------STGAMAGLGMRIRTLNANFDTDPM 227


>gi|86748607|ref|YP_485103.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86571635|gb|ABD06192.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 253

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 10/199 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +            ++ RVV   ++ + I +  G+  G    ISS   P   +L   P   
Sbjct: 52  WIKSGEFAVDLAYSVARVVSGYLLGASIGVVFGVLTGQFQMISSLFSPVFHILRPIPPIA 111

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F P+V+                L+ +G  + +      G           A        R
Sbjct: 112 FVPIVILWFGLSETGK----IFLVFWGVFFTVWLTTHIGVQKIDRGLIRAALMLGTPRRR 167

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I+L G  PY   G  TA   ++   + +E+A          G+   I  + +    
Sbjct: 168 MLTEIVLFGALPYIAVGLRTAVSISFYTLVAAELAG------AFAGIVYRIEIAQQNLQT 221

Query: 553 PEVVLGVLIMCCFVLALNR 571
            +V+ G++ +       +R
Sbjct: 222 GQVMGGLVALGAISFLADR 240



 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 100/253 (39%), Gaps = 18/253 (7%)

Query: 18  NIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +I  +  F+LV  +++   +  I     P  +   +   +         + +  R++S  
Sbjct: 14  SILSIPLFLLVWELVSRSQIVNIILFPPPTVVAVAMGEWIKSGEFAVDLAYSVARVVSGY 73

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++      V+  L  + + +  +  P+  I++ IP + F+   +++F     GK      
Sbjct: 74  LLGASIGVVFGVLTGQFQMISSLFSPVFHILRPIPPIAFVPIVILWFGLSETGK------ 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             IF +F    + +  + +  +  I R L   +        +    + +  ++P +   +
Sbjct: 128 --IFLVFWGVFFTVWLTTHIGVQKIDRGLIRAALMLGTPRRRMLTEIVLFGALPYIAVGL 185

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++S  ++ +VA+E+           GI   I +A +      ++  ++ +  + FL D
Sbjct: 186 RTAVSISFYTLVAAELAG------AFAGIVYRIEIAQQNLQTGQVMGGLVALGAISFLAD 239

Query: 257 Q---LLFRPMIVW 266
           +    L + ++ W
Sbjct: 240 RGFSALTQRLVWW 252


>gi|118467527|ref|YP_886801.1| transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118168814|gb|ABK69710.1| transporter permease 2, putative [Mycobacterium smegmatis str. MC2
           155]
          Length = 262

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 14/255 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G+ R+        + +      ML ++         I    Q+ G +V++ +    L+ +
Sbjct: 16  GLPRWRTLLGNQAVGATLLALLMLVVWEIFSDLTFVIPSPVQTFGVLVDNLSDPAYLFDL 75

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T   V +  +I + I   +G+ +G    +    +P   +L   P  V +P+++  
Sbjct: 76  R---VTAQSVFLAFVIGTAIGGGLGLLLGLSERLRVMFEPMLIILNGIPKIVLYPVLLPI 132

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            S       + +         + +L NV  G    P  + ++A S     W+   +II+P
Sbjct: 133 FSLTGSKVVMGVLF-----ALFPVLINVSTGVQEIPRVYWKLARSVRAGRWQTLTHIIIP 187

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            I    +TG   A   A    ++SE  +         GLG  + +S   G +P +V  ++
Sbjct: 188 AIRRPLLTGIRLAVSLAVVGVVLSEFFA------TRRGLGRVVLQSYSHGDYPSMVATIM 241

Query: 561 IMCCFVLALNRFLWH 575
           ++      ++  LW 
Sbjct: 242 LLITISFGISIVLWQ 256



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 15/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P     ++   L   +       T   +  A VI          L   S RL ++  P
Sbjct: 53  PSPVQTFGVLVDNLSDPAYLFDLRVTAQSVFLAFVIGTAIGGGLGLLLGLSERLRVMFEP 112

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L I+  IP +      +  F       V+G   A         ++ +  ++   +  IP
Sbjct: 113 MLIILNGIPKIVLYPVLLPIFSLTGSKVVMGVLFA---------LFPVLINVSTGVQEIP 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R   +++RS R   WQ   ++ +P     L+  + +++S     VV SE           
Sbjct: 164 RVYWKLARSVRAGRWQTLTHIIIPAIRRPLLTGIRLAVSLAVVGVVLSEFFA------TR 217

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  +  +    D  +++  ++ ++ + F    +L++
Sbjct: 218 RGLGRVVLQSYSHGDYPSMVATIMLLITISFGISIVLWQ 256


>gi|303326087|ref|ZP_07356530.1| putative nitrate ABC transporter, permease protein [Desulfovibrio
           sp. 3_1_syn3]
 gi|302864003|gb|EFL86934.1| putative nitrate ABC transporter, permease protein [Desulfovibrio
           sp. 3_1_syn3]
          Length = 259

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 102/245 (41%), Gaps = 17/245 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTL 70
           R    +  + AFV++ G++++ +      +  +   + V +        ++  +   +  
Sbjct: 10  RWLAPVASIGAFVVLWGLVSLNVDPDFLPSPLKVWQEFVRLFNHPVGGTTILGHVGFSLR 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+L A  +++L       L   +R    ++ PI ++++ IP + ++   +++        
Sbjct: 70  RVLIAFGLAVLLGLPLGLLMGWNRTCEKIVAPIFEVLRPIPPIAWIPIAILWLGV----- 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              AE + IF  F      M  + Y  +  +   L + +RSF  S  Q+F+ + VP  MP
Sbjct: 125 ---AEGSKIFICFVGAFVIMILNSYTGMRYVDPLLIDAARSFGASRSQQFFNVAVPACMP 181

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   +  S+S  W  V+A+EM+          G+G  I   +       IL  M+ +  
Sbjct: 182 SIFAGVQNSLSMAWMCVLAAEMVG------AREGVGYIIIQGMDLNKSSMILVGMVLIGI 235

Query: 251 VIFLY 255
           V  L 
Sbjct: 236 VGSLL 240



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 77/210 (36%), Gaps = 12/210 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ    + NH        ++     ++ RV++   +A ++ +P+G+ +G+       + 
Sbjct: 43  VWQEFVRLFNH--PVGGTTILGHVGFSLRRVLIAFGLAVLLGLPLGLLMGWNRTCEKIVA 100

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P  ++L   P   + P+ +  +     +       +   G    ++ N   G        
Sbjct: 101 PIFEVLRPIPPIAWIPIAILWLGVAEGSK----IFICFVGAFVIMILNSYTGMRYVDPLL 156

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A SF  +  + +  + +P   P    G   +   AW   + +E+           G+
Sbjct: 157 IDAARSFGASRSQQFFNVAVPACMPSIFAGVQNSLSMAWMCVLAAEMVG------AREGV 210

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G  I +  +      +++G++++      L
Sbjct: 211 GYIIIQGMDLNKSSMILVGMVLIGIVGSLL 240


>gi|282857682|ref|ZP_06266892.1| putative aliphatic sulfonates transport permease protein SsuC
           [Pyramidobacter piscolens W5455]
 gi|282584467|gb|EFB89825.1| putative aliphatic sulfonates transport permease protein SsuC
           [Pyramidobacter piscolens W5455]
          Length = 253

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 83/237 (35%), Gaps = 15/237 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F L                 P  +           +L      +  R+     IS   
Sbjct: 15  LLFALWWWGSARQWWSPYVLPSPVQVWRAFWSMTRSGALLGDLWASVRRVAVGFSISFAL 74

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F     +A +RR       +++ ++ +P L  +   +++F           E +    I
Sbjct: 75  AFTLGLASAWTRRTEYYGH-LVEFLRHVPPLSLIPLLILWFGIG--------EKSKTVLI 125

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  S+++        L EV R+   S W+ F  +  P ++P ++  M + +  
Sbjct: 126 VLATFFPIYMSVHKGFVTANTKLMEVGRTMGFSKWRLFSRIMFPCAVPDILVGMRIGIGY 185

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W  ++++EMI          G+G  I  A +      ++  +  +  V +L D  L
Sbjct: 186 SWRAIISAEMIAAAS------GLGYMILDAQQMSRSDKVVAGVFVIGLVGYLTDAAL 236



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 78/225 (34%), Gaps = 11/225 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            +W       +  +    +      ++      ++     ++ RV V   I+  +   +G
Sbjct: 20  WWWGSARQWWSPYVLPSPVQVWRAFWSMTRSGALLGDLWASVRRVAVGFSISFALAFTLG 79

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +   +            + L   P     PL++        +     ++L++  T + I 
Sbjct: 80  LASAWTRRTEYYGH-LVEFLRHVPPLSLIPLLILWFGIGEKSK----TVLIVLATFFPIY 134

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +V  G         EV  +   + WR +  I+ P   P  + G     G +W A I +E
Sbjct: 135 MSVHKGFVTANTKLMEVGRTMGFSKWRLFSRIMFPCAVPDILVGMRIGIGYSWRAIISAE 194

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +        +GLG  I ++ +     +VV GV ++       +
Sbjct: 195 MIA------AASGLGYMILDAQQMSRSDKVVAGVFVIGLVGYLTD 233


>gi|87301750|ref|ZP_01084590.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701]
 gi|87283967|gb|EAQ75921.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701]
          Length = 248

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 23/256 (8%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----------VIWLGCITMF 388
           R  ++L      VV  V   I+       +   +   V            ++     ++ 
Sbjct: 2   RNPWLLGPLGIGVVLLVWSLISLSGAVDPLFLPSPPAVWQAASDQFQGGILVGDAIASIR 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV +   +++ + +P+GI +G  P I   ++P   L+   PA  F PL++       L  
Sbjct: 62  RVFLGFALSAALALPLGIAMGSNPLICRLLEPLLGLIRYMPAPAFIPLLIIYFGLGEL-- 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                LL+  GT ++    ++      P +  E A +    G      ++ P I P  + 
Sbjct: 120 --PKVLLIFVGTFFFNTLMIMDAVKFVPPELIETALTLGGRGLPILTRVVAPFIAPQVID 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                   AWN  IV+E+ +         GLG  I+ +       E+ +G++++    L 
Sbjct: 178 AYRINMASAWNLVIVAELVA------ANEGLGKRISLAQRFLRTDEIFVGLIVIGLIGLI 231

Query: 569 LN---RFLWHPLYLYG 581
           ++   RFL      + 
Sbjct: 232 IDLGFRFLLRRSCAWA 247



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 92/255 (36%), Gaps = 18/255 (7%)

Query: 18  NIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
               +   +LV  +I++           P  +            L   A  +  R+    
Sbjct: 8   GPLGIGVVLLVWSLISLSGAVDPLFLPSPPAVWQAASDQFQGGILVGDAIASIRRVFLGF 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            +S             +  +  +L P+L +++ +P   F+   ++YF           EL
Sbjct: 68  ALSAALALPLGIAMGSNPLICRLLEPLLGLIRYMPAPAFIPLLIIYFGLG--------EL 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +  IF    +  T  +  ++  +P +L E + +    G      +  PF  P ++   
Sbjct: 120 PKVLLIFVGTFFFNTLMIMDAVKFVPPELIETALTLGGRGLPILTRVVAPFIAPQVIDAY 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++M+  W  V+ +E++   +      G+G  I+LA +      I   ++ +  +  + D
Sbjct: 180 RINMASAWNLVIVAELVAANE------GLGKRISLAQRFLRTDEIFVGLIVIGLIGLIID 233

Query: 257 ---QLLFRPMIVWSN 268
              + L R    W+N
Sbjct: 234 LGFRFLLRRSCAWAN 248


>gi|153955011|ref|YP_001395776.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146347869|gb|EDK34405.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
          Length = 258

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 10/232 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + + I+  C V      +       + +        Y       ++ RV++ I+++ II 
Sbjct: 31  FWILIWHVCSVFINEELLLPSPFQVLKSLVLLMGKFYFWKSVLSSVIRVIIGILLSVIIG 90

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I  G+  G    +   ++P    + A P      + +        N +  +    I    
Sbjct: 91  IVFGLTAGLNKFVEELLEPVVITVKATPVISIIIIALVWF-----NSSNVVIFTAILICF 145

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  NV+ G  +      ++A+ F +      + I LP I  Y V+G +   G  W  S
Sbjct: 146 PIVYTNVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNYIVSGILMCMGIGWKVS 205

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + SEV S     +    L A     T      E+    +++        +  
Sbjct: 206 VASEVLSIPRYSIGLNLLSAKTTLETA-----ELFAWTIVVVILSFMFEKVF 252



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 86/197 (43%), Gaps = 9/197 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L+  + ++ ++       P  ++  + + +      +    + +R++  +++S++   V
Sbjct: 33  ILIWHVCSVFINEELLLPSPFQVLKSLVLLMGKFYFWKSVLSSVIRVIIGILLSVIIGIV 92

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +   A  ++ +  +L P++  +++ P++  +   +V+F +             IF     
Sbjct: 93  FGLTAGLNKFVEELLEPVVITVKATPVISIIIIALVWFNSSN---------VVIFTAILI 143

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  ++ Q + +I + L +++  F++        + +P     +V  ++M M  GW 
Sbjct: 144 CFPIVYTNVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNYIVSGILMCMGIGWK 203

Query: 206 FVVASEMIVVGDTVIPL 222
             VASE++ +    I L
Sbjct: 204 VSVASEVLSIPRYSIGL 220


>gi|15672830|ref|NP_267004.1| choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12723774|gb|AAK04946.1|AE006318_9 choline ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
          Length = 500

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 19/202 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L ++   + + +  A++IS+        L    +    VL  +  I Q+IP L  L 
Sbjct: 16  WQALLEHIQISLISIFIAILISIPLAL---LLRRLPKIAEPVLQ-VTGIFQTIPSLALLG 71

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             L AI A+    ++ +  + Y  L  I   L E + +F ++  
Sbjct: 72  LLIPFIGIG--------SLPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNRR 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++     +  +M  ++  +  S          + +I  G       G+G++I L I   D
Sbjct: 124 ERLMKFELSLAMHFIMAGIRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMND 176

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  IL   ++   +  ++  LL
Sbjct: 177 VSLILIGAISSALLAIIFSSLL 198



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%)

Query: 398 SIIWIPVGIWIGFRPHIS-----SKIQPFAQ---LLAAFPANVFFPLVVSCVSYYHLNPN 449
           S+I I + I I     +         +P  Q   +    P+     L++  +       +
Sbjct: 26  SLISIFIAILISIPLALLLRRLPKIAEPVLQVTGIFQTIPSLALLGLLIPFIGIG----S 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   + ++    + I+ N   G         E A++F +          L     + + G
Sbjct: 82  LPAIVALVVYAIFPIVQNTYTGLEQIEPSLIEAATAFGMNRRERLMKFELSLAMHFIMAG 141

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++ +   G       GLG +I           +++G +      +  
Sbjct: 142 IRTSTVMVIGTATLAALIGAG-------GLGNFILLGINMNDVSLILIGAISSALLAIIF 194

Query: 570 NRFL 573
           +  L
Sbjct: 195 SSLL 198


>gi|27375222|ref|NP_766751.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27348358|dbj|BAC45376.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 282

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 17/259 (6%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R         + ++ R    + +     +   A      +  ++         +Y + 
Sbjct: 23  ATRRVRFRGAGFVPASSRFGGWIALALVIAIWQAAGSAGLVNPLFLPAPLAIVRAIYELA 82

Query: 382 LGCI-------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+ V  ++ +   + VG  IG      S    F   L   P     
Sbjct: 83  MSGALWQHLSASLLRIGVGWLLGTAAGVAVGFAIGLSRLARSVGITFISALFPIPKIALL 142

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++  +              +  G  +    +V +G  A P +   +A SF++      
Sbjct: 143 PLLILWLGIG----EEPKIATIALGVFFSTAISVYSGVDAVPRNLIRMAQSFNVPFATIV 198

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +I PG  P  + G       A    + +E+           G+GA++ ++       +
Sbjct: 199 RKVIWPGALPAILAGFRITASVALLLVVSAEMIG------AQYGIGAFVLQAGNLMQTDQ 252

Query: 555 VVLGVLIMCCFVLALNRFL 573
           ++ GV+I+  F LA+ + +
Sbjct: 253 LLAGVVILSVFGLAVGKVI 271



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 88/253 (34%), Gaps = 21/253 (8%)

Query: 21  DLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
             +A  LVI I                 P  IV  +       +L Q+ S + LR+    
Sbjct: 43  GWIALALVIAIWQAAGSAGLVNPLFLPAPLAIVRAIYELAMSGALWQHLSASLLRIGVGW 102

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++              SR    V +  +  +  IP +  L   +++            E 
Sbjct: 103 LLGTAAGVAVGFAIGLSRLARSVGITFISALFPIPKIALLPLLILWLGIG--------EE 154

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I  I     ++   S+Y  +  +PR+L  +++SF +        +  P ++P ++   
Sbjct: 155 PKIATIALGVFFSTAISVYSGVDAVPRNLIRMAQSFNVPFATIVRKVIWPGALPAILAGF 214

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL-- 254
            ++ S     VV++EMI          GIG+++  A        +L  ++ +        
Sbjct: 215 RITASVALLLVVSAEMIG------AQYGIGAFVLQAGNLMQTDQLLAGVVILSVFGLAVG 268

Query: 255 -YDQLLFRPMIVW 266
               LL   ++ W
Sbjct: 269 KVINLLETRLLHW 281


>gi|219854288|ref|YP_002471410.1| hypothetical protein CKR_0945 [Clostridium kluyveri NBRC 12016]
 gi|219568012|dbj|BAH05996.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 263

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 66/165 (40%), Gaps = 10/165 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+   +    +P  ++ +     + F + +  +        +   +++ +   W I+FN 
Sbjct: 86  GWFSKLELIAEPVIEIFSQVNPFILFHVALLFLGIG----EITKVVVIAWTCIWPIMFNT 141

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           I G     +   + A  F +  W+ +  +++P I P    G   + G ++   I +E+  
Sbjct: 142 IYGIRNMDSLILKAARGFGLKRWKLFYKVVIPSILPSVFVGIRISAGYSFFMLIAAEMMG 201

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++GLG  I  + E  +  ++    +++    L ++  +
Sbjct: 202 ------ASSGLGWLILNNQENYAINKIFAVAIVIAILGLFVDIII 240



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L     +L ++  P+++I   +         +++            E+  +  I  + +W
Sbjct: 84  LGGWFSKLELIAEPVIEIFSQVNPFILFHVALLFLGIG--------EITKVVVIAWTCIW 135

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            + F+    + N+   + + +R F L  W+ F+ + +P  +P +   + +S    +F ++
Sbjct: 136 PIMFNTIYGIRNMDSLILKAARGFGLKRWKLFYKVVIPSILPSVFVGIRISAGYSFFMLI 195

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           A+EM+          G+G  I    +   +  I    + +  +    D ++
Sbjct: 196 AAEMMGASS------GLGWLILNNQENYAINKIFAVAIVIAILGLFVDIII 240


>gi|91783643|ref|YP_558849.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia xenovorans LB400]
 gi|91687597|gb|ABE30797.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia xenovorans LB400]
          Length = 292

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q  + +   +L   ++     FV  +LA  +R    VL  +  +   +P +  L  
Sbjct: 86  GELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVSTRLGRDVLSMLTAMFNPLPSIALLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S +W +  + Y    ++P  L    R++ L+G +
Sbjct: 146 ALLWFGLGTG--------SLLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIR 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + +  +  W  ++A+E++    +       G YI     E   
Sbjct: 198 HVLLILVPAALPAILAGLRVGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYT 255

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +   +  ++ +  L + L+F
Sbjct: 256 DRVFAGLAAVIVIGLLIEHLVF 277



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 12/292 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            L  +         PL   V +    LG   F              ++ +L   W     
Sbjct: 7   LLPPVREEYERPLEPLGELVLEAPLPLGKRIF-----AQGWVRKTLIALVLIGIWEIAAR 61

Query: 354 GVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            +   +   + G   + F        ++    ++M  ++   ++ + +   +        
Sbjct: 62  AIDNDLLLPTFGATFSAFVQGVWSGELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVSTR 121

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                +     +    P+    PL +        +    L  +++    W +  N  +G 
Sbjct: 122 LGRDVLSMLTAMFNPLPSIALLPLALLWFGLGTGS----LLFVLVHSVLWPLALNTYSGF 177

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            + P   +    ++ +TG R    I++P   P  + G       AW   I +E+      
Sbjct: 178 QSVPATLRMTGRNYGLTGIRHVLLILVPAALPAILAGLRVGWAFAWRTLIAAELVFGASS 237

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                  G YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 238 GSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLIEHLVFDTLERVTVRR 287


>gi|294633688|ref|ZP_06712246.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. e14]
 gi|292830330|gb|EFF88681.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. e14]
          Length = 649

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 15/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +T   M+ A++ S++        A  S RL   L P+LD MQ +P   +L   V+ F 
Sbjct: 140 TMQTLALMVVAVLASVVLGTFLGLAAGLSDRLERALRPVLDTMQVLPAFAYLLPVVLVFG 199

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P        AA+ A        M       L +    + E   S   +  Q+     
Sbjct: 200 IGVP--------AAVLATVVYAAPPMARLTSLGLRSADPGVMEAVESLGATFRQRLLTAR 251

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   ++  +  ++       V + MI  G       G+G  +  A+   D+ A L A
Sbjct: 252 LPLARKEIMLGVNQTIMMALSMAVIASMIGAG-------GLGDRVYQALASVDVGAALAA 304

Query: 245 MLTMLGVIFLYDQL 258
            + ++ +  + D++
Sbjct: 305 GIPIVLLAVVLDRV 318


>gi|332360370|gb|EGJ38182.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK49]
          Length = 506

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|328469976|gb|EGF40887.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio parahaemolyticus 10329]
          Length = 266

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 17/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L  
Sbjct: 31  AAVILGLWQLIVVVFDMPSFILPSPIEVLDRLITRYDVLLKHTWVTAQEILLGLALGLSM 90

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F +
Sbjct: 91  GLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPV 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++  
Sbjct: 151 TTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV-- 200

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               V+A    VVG+ V    G+G  +  A     +  +  A+  +  +          L
Sbjct: 201 ----VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAALSIALYFTTDKL 256

Query: 260 FRPMIVWSNK 269
            +  I W NK
Sbjct: 257 LKKAIPWENK 266



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAA 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|239815319|ref|YP_002944229.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239801896|gb|ACS18963.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 277

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 10/243 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           +     NQ++++ L           +  + ++    ++     +    +      T+   
Sbjct: 25  WHLASRNQQIAFFLGEPIQVAGRIWSWFLPFEVPPNLLFPEGLKGNADIYRHLGTTLLET 84

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+   I +++ +  G+W+   P  S  + P+ +   + P  +  P+          +   
Sbjct: 85  VLAFGIGTVLGLACGLWLALAPTASLILDPYIKAANSMPRVILAPIFALWFGLGIWSKVA 144

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+ F     + FNV  G           A        +  R + LP    +  +  
Sbjct: 145 LAVTLVFFI----VFFNVYQGVREVSPVVLANAKMLGANQRQLLRTVYLPSATSWVFSSL 200

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+ G A+  ++V E            G+G  I ++        V  G++++  F L L+
Sbjct: 201 HTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDVNTVFAGIVVLTAFALLLD 254

Query: 571 RFL 573
             +
Sbjct: 255 GLV 257



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 73/210 (34%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   T L  + A  I  +         A +    ++L P +    S+P +       ++
Sbjct: 75  RHLGTTLLETVLAFGIGTVLGLACGLWLALAPTASLILDPYIKAANSMPRVILAPIFALW 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   ++    +  Q    
Sbjct: 135 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPVVLANAKMLGANQRQLLRT 186

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 187 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDVNTVF 240

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             ++ +     L D    L+ + ++ W  +
Sbjct: 241 AGIVVLTAFALLLDGLVGLIEKRLMKWQPR 270


>gi|108760529|ref|YP_628865.1| glycine betaine/L-proline ABC transporter permease and
           substrate-binding protein [Myxococcus xanthus DK 1622]
 gi|108464409|gb|ABF89594.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Myxococcus xanthus DK 1622]
          Length = 498

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 15/185 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +        +  +++ ++        LAA+  RLG  ++ +  ++Q++P L  L   + 
Sbjct: 294 WKRTREHLFLVGVSLLAAMALAVPLGVLAARRPRLGRGVLGLTGVIQTVPSLALLVVMIP 353

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                           AI A+F   +  +  +    L  IP ++ E + +  L    + W
Sbjct: 354 LLGIGSRP--------AIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPALARLW 405

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P ++  +  +       V+      +G  ++   G G  I   I+  D+  I
Sbjct: 406 RIELPMAAPSILAGIQTA------AVINVGTATLG-ALVGAGGYGQPILTGIRLDDVRLI 458

Query: 242 LYAML 246
           L   +
Sbjct: 459 LEGAI 463



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 77/223 (34%), Gaps = 11/223 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +   + L   L +       + ++L +  R+  + +          A+G+  +  G  + 
Sbjct: 231 ARAPEALAAMLRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLA 290

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              ++     ++L  +++       + A  + +P+G+    RP +   +     ++   P
Sbjct: 291 SRVWKRTREHLFLVGVSL-------LAAMALAVPLGVLAARRPRLGRGVLGLTGVIQTVP 343

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +     +++  +       +      +   +   I+ N  AG +  P + +E A +  + 
Sbjct: 344 SLALLVVMIPLLGIG----SRPAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLP 399

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                  I LP   P  + G  TA       + +  +   G  
Sbjct: 400 ALARLWRIELPMAAPSILAGIQTAAVINVGTATLGALVGAGGY 442


>gi|46907650|ref|YP_014039.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|226224023|ref|YP_002758130.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes Clip81459]
 gi|254992616|ref|ZP_05274806.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes FSL J2-064]
 gi|46880918|gb|AAT04216.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|225876485|emb|CAS05194.1| Putative glycine betaine/carnitine/choline ABC transporter
           (membrane protein) [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
          Length = 504

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVELPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVELPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|23099146|ref|NP_692612.1| choline ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22777374|dbj|BAC13647.1| choline ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 508

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 78/201 (38%), Gaps = 15/201 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ I+++       +  + +RL   ++ +  I+Q+IP L  L F + ++         
Sbjct: 27  LLSLAIAIILAVPIGIILTRYKRLAEPIIGVSAILQTIPSLAVLAFLIPFYGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  +  + Y  +  +   L E +R   ++  ++   + +P +MP +
Sbjct: 81  --TTPAIIALVLYGLLPILRNTYTGIVEVDPALREAARGMGMNTVKRLLKVELPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  SM         + +I  G     +           +  D+  +L   +    + 
Sbjct: 139 MAGIRTSMVLIVGTTTIAALIGAGGLGDLIL------LGLDRGGDIPLVLLGAIPAALLA 192

Query: 253 FLYDQLLFRPMIVWSNKFRLE 273
            + D +L R     S K+ ++
Sbjct: 193 IILDVIL-RLFEKLSKKYGIQ 212



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + IA I+ +P+GI +     ++  I   + +L   P+      ++           +
Sbjct: 27  LLSLAIAIILAVPIGIILTRYKRLAEPIIGVSAILQTIPSLAVLAFLIPFYGIGTTPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      IL N   G        +E A    +   +    + LP   P  + G 
Sbjct: 87  ALVLYGLL----PILRNTYTGIVEVDPALREAARGMGMNTVKRLLKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G +                 G  P V+LG +      + L+
Sbjct: 143 RTSMVLIVGTTTIAALIGAGGLGDLIL------LGLDRGGDIPLVLLGAIPAALLAIILD 196

Query: 571 RFLWHPLYLYGTRCL 585
             L   L+   ++  
Sbjct: 197 VIL--RLFEKLSKKY 209


>gi|148256233|ref|YP_001240818.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408406|gb|ABQ36912.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 281

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 91/268 (33%), Gaps = 9/268 (3%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R L            ++     ++ +  +        + +    Q++  + +   ++++
Sbjct: 17  ARRLHWSALRRSAMVRRVLVLATLALLWQLAATFTASPLLLPSFTQTMTALWDGLLHENL 76

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                     + +  +L ++  +I++ +             +     +    PA    PL
Sbjct: 77  ASATAASLGILIKGYLLALLLGLIFVSLATA---NALCREALITLTAMFNPLPAIALLPL 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W        G  + P+  + V  ++ +TG R+   
Sbjct: 134 AMLWFGLGETS----LIFVLVHSVLWPFALATFTGFQSVPDTHRLVGRNYGLTGARYVGS 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  ++G       AW   I +E+     +     GLG +I  +  +    +V 
Sbjct: 190 ILIPSALPSILSGLKIGWAFAWRTLIAAELVFG--VSASQGGLGWFIFRNRNELFTDKVF 247

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G++++    L +   L+  +     R 
Sbjct: 248 AGLIMVILIGLIVEFGLFRAIEAVTVRR 275



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 87/206 (42%), Gaps = 10/206 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L    + +   ++   +++LL   ++ +LA  +      L+ +  +   +P +  L   
Sbjct: 75  NLASATAASLGILIKGYLLALLLGLIFVSLATANALCREALITLTAMFNPLPAIALLPLA 134

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F           E + IF +  S +W    + +    ++P     V R++ L+G + 
Sbjct: 135 MLWFGLG--------ETSLIFVLVHSVLWPFALATFTGFQSVPDTHRLVGRNYGLTGARY 186

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  + +  +  W  ++A+E++          G+G +I     E    
Sbjct: 187 VGSILIPSALPSILSGLKIGWAFAWRTLIAAELVFGVSASQG--GLGWFIFRNRNELFTD 244

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIV 265
            +   ++ ++ +  + +  LFR +  
Sbjct: 245 KVFAGLIMVILIGLIVEFGLFRAIEA 270


>gi|238784823|ref|ZP_04628824.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia bercovieri ATCC 43970]
 gi|238714239|gb|EEQ06250.1| Glycine betaine/L-proline transport system permease protein proW
           [Yersinia bercovieri ATCC 43970]
          Length = 170

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 15/152 (9%)

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           MQ+ P   +L   V+ F     G V G  +  IFA     +  +       +  +P DL 
Sbjct: 1   MQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-----LPPIVRLTILGIKQVPEDLI 52

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E + SF  +  Q  + + +P +MP ++  +  ++      VV + MI VG       G+G
Sbjct: 53  EAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLG 105

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +   I   D+       + ++ +  + D+L
Sbjct: 106 QMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 137



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 11/144 (7%)

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA V+   +V          N+   ++ I      I+   I G    P D  E A SF  
Sbjct: 5   PAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIKQVPEDLIEAAESFGA 60

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              +    + LP   P  + G       A +  +++ + + G       GLG  +     
Sbjct: 61  NPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIG 113

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
           +       +G + +    + L+R 
Sbjct: 114 RLDMGLAAVGGVGIVILAIILDRL 137


>gi|187923484|ref|YP_001895126.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gi|187714678|gb|ACD15902.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 247

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 17/244 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSA 75
           + + ++F +VIG++         T                     L      T   + + 
Sbjct: 4   LIETVSFWIVIGLVWEFGVRWTGTREYVLPALSQVFAAGWEMRGQLLADTLATAWEVFAG 63

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             ++L+       LA+ S      L P++  +QS+P +      +V+F   +  K+  A 
Sbjct: 64  FALALVGGLAIGLLASMSSIARRTLFPLVTALQSMPKIALAPLLIVWFGYGFASKLAAAV 123

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L A F         +  +    L  +PR+L+E  R+   S  + FW+L +P ++P L+  
Sbjct: 124 LFAFF--------PIVIATMGGLAGVPRNLDEHFRALGASPARTFWHLRLPAALPALIDG 175

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++M       +  E I          G+G  I  A           A+L +  +  L+
Sbjct: 176 LKIAMPLAVIGAIVGEFIG------SESGLGHLIVFATSNAQTALSFAAILMVTALAMLF 229

Query: 256 DQLL 259
              +
Sbjct: 230 YWAV 233



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 10/198 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            ++    ++     T + V     +A +  + +G+           + P    L + P  
Sbjct: 42  GWEMRGQLLADTLATAWEVFAGFALALVGGLAIGLLASMSSIARRTLFPLVTALQSMPKI 101

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++    Y   +      L       + I+   + G +  P +  E   +   +  
Sbjct: 102 ALAPLLIVWFGYGFASKLAAAVLF----AFFPIVIATMGGLAGVPRNLDEHFRALGASPA 157

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R + ++ LP   P  + G   A   A   +IV E           +GLG  I  +T    
Sbjct: 158 RTFWHLRLPAALPALIDGLKIAMPLAVIGAIVGEFIG------SESGLGHLIVFATSNAQ 211

Query: 552 FPEVVLGVLIMCCFVLAL 569
                  +L++    +  
Sbjct: 212 TALSFAAILMVTALAMLF 229


>gi|326333818|ref|ZP_08200051.1| aliphatic sulfonates ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325948400|gb|EGD40507.1| aliphatic sulfonates ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 92/266 (34%), Gaps = 22/266 (8%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--- 376
           +GV+     +  +          +    W   V  + + I   + G +      +     
Sbjct: 12  VGVVSEKVTDQRVVRRRLGPGPRVPGTLWIGPVLLLGLWIVASATGLLDPRTLSEPWVVV 71

Query: 377 ---------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                      +      + +R  + ++I   + + + +  G      + I    Q+  A
Sbjct: 72  ETAQRLIADGRLPEALATSAYRAALGLVIGVGVGLALALVSGLSRAGEALIDGPVQVKRA 131

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+    PL++  +            + +  G    I  +   G     + + E+A +  
Sbjct: 132 IPSLALMPLLILWLGIG----EPMKVITIALGVLIPIYIHTHNGLRGIDSRYAELAETVS 187

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +    + R+++LPG  P ++ G   A   A  A +V E  +       T+G+G  I  ++
Sbjct: 188 LGRGAFIRHVVLPGATPGFLLGLRFAVLNALLALVVVEQVN------ATSGIGHMITLAS 241

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
             G    +V+G+++     L  +  +
Sbjct: 242 SYGQTEIIVVGLVVYALLGLVADGIV 267



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 92/261 (35%), Gaps = 19/261 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P +   ++     LL   +V     +L    +  + P  +V+     +    LP+  + +
Sbjct: 33  PRVPGTLWIGPVLLLGLWIVASATGLLDP--RTLSEPWVVVETAQRLIADGRLPEALATS 90

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R    +VI +      A ++  SR    ++   + + ++IP L  +   +++     P
Sbjct: 91  AYRAALGLVIGVGVGLALALVSGLSRAGEALIDGPVQVKRAIPSLALMPLLILWLGIGEP 150

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KVI         I    +  +    +  L  I     E++ +  L       ++ +P +
Sbjct: 151 MKVI--------TIALGVLIPIYIHTHNGLRGIDSRYAELAETVSLGRGAFIRHVVLPGA 202

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG +  +  ++      +V  E +          GIG  I LA        I+  ++  
Sbjct: 203 TPGFLLGLRFAVLNALLALVVVEQV------NATSGIGHMITLASSYGQTEIIVVGLVVY 256

Query: 249 LGVIFLYD---QLLFRPMIVW 266
             +  + D   +   R  + W
Sbjct: 257 ALLGLVADGIVRFTERKALAW 277


>gi|160896588|ref|YP_001562170.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160362172|gb|ABX33785.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 255

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 86/241 (35%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + LL  V+++  +      + E   P        +      +  +A RT    ++   I
Sbjct: 11  PWVLLLAVILLWQVICSAFEVSEFIFPSPWAIGRQLAEFSGIIAAHAWRTYWVTMAGFGI 70

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   +   L   SR       P++    ++P   F+   VV+F              A
Sbjct: 71  AIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGAGP--------A 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ +
Sbjct: 123 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSMPYFYGSLKV 182

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +++  +     SEM    +      GIG  +  A     +      ++ +  +  +  +L
Sbjct: 183 AITLAFVGTTVSEMTAANE------GIGYLLVSAGSSMQMGLAFAGLIVVGAMAMVMYEL 236

Query: 259 L 259
            
Sbjct: 237 F 237



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +    IA ++ + +G  IG      +   P      A P   F P++V       
Sbjct: 60  TYWVTMAGFGIAIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGA 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ N+  G +    + ++V        W     + LP   PY
Sbjct: 120 G----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSMPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+           G+G  +  +           G++++   
Sbjct: 176 FYGSLKVAITLAFVGTTVSEM------TAANEGIGYLLVSAGSSMQMGLAFAGLIVVGAM 229

Query: 566 VLALNRFL 573
            + +    
Sbjct: 230 AMVMYELF 237


>gi|262039220|ref|ZP_06012538.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Leptotrichia goodfellowii F0264]
 gi|261746714|gb|EEY34235.1| glycine betaine/choline ABC transporter, ATP-binding protein
           [Leptotrichia goodfellowii F0264]
          Length = 505

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+VI+LL         +  +++  +++ +  ++Q++P L  L   + +          
Sbjct: 27  FLALVIALLIAVPLGIYLSYHKKIAEIVIGVTAVLQTVPSLALLGLLIPFVGIG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+ A+    +  +  + Y  +  +       SR+  ++  Q+   + +P +MP +
Sbjct: 81  --TVPAVIALVIYALLPILRNTYTGISEVDPVYLLASRALGMNKVQQLLKIQIPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +          + +I  G     +        L +   +   IL   +    + 
Sbjct: 139 MAGIRTATVLIIGTATLASLIGAGGLGSLI-------LLGLDRNNNNLILLGAVPAALLA 191

Query: 253 FLYDQLLFR 261
             +DQ+L R
Sbjct: 192 VFFDQVLKR 200



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 72/201 (35%), Gaps = 20/201 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA +I +P+GI++ +   I+  +     +L   P+     L++  V    +   +
Sbjct: 27  FLALVIALLIAVPLGIYLSYHKKIAEIVIGVTAVLQTVPSLALLGLLIPFVGIGTVPAVI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G S     +   + +  +   +    I +P   P  + G 
Sbjct: 87  ALVIYALL----PILRNTYTGISEVDPVYLLASRALGMNKVQQLLKIQIPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 143 RTATVLIIGTATLASLIGAGGLGSLIL-------LGLDRNNNNLILLGAVPAALLAVFFD 195

Query: 571 RFL-------WHP--LYLYGT 582
           + L       W    +Y++  
Sbjct: 196 QVLKRLEKKDWKKTLIYMFAA 216


>gi|297203734|ref|ZP_06921131.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197711783|gb|EDY55817.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 257

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 10/159 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P++        + L   P+    PL V        +    + LL+++ + W +L   + G
Sbjct: 86  PYLREATASTIEFLRPIPSVALIPLAVLLYGSELRS----VLLLVVYASFWQVLIQTLYG 141

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                    E A S+ +  W   RY++ P   PY +TG   A   A   +I  E+     
Sbjct: 142 VQDVDPVADETARSYGLGAWARIRYVLWPTALPYVMTGVRLAAAVALILAITGELV---- 197

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   GLGA IA +    + PE+   +++     L +N
Sbjct: 198 --IGAPGLGARIAVAQNSQAVPEMYALIVVTGVLGLLIN 234



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 83/229 (36%), Gaps = 17/229 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           I   +   L   +       T       + I+     V   + +    L       ++ +
Sbjct: 40  IARALADELSDGTFWTALGDTLTGWALGLAIAASAGIVIGVIVSVVPYLREATASTIEFL 99

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           + IP +  +   V+ + +           + +  +  +  W +       + ++    +E
Sbjct: 100 RPIPSVALIPLAVLLYGSELR--------SVLLLVVYASFWQVLIQTLYGVQDVDPVADE 151

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +RS+ L  W +  Y+  P ++P ++  + ++ +      +  E++      I  PG+G+
Sbjct: 152 TARSYGLGAWARIRYVLWPTALPYVMTGVRLAAAVALILAITGELV------IGAPGLGA 205

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
            IA+A   Q +  +   ++    +  L +   + + R  + W    R E
Sbjct: 206 RIAVAQNSQAVPEMYALIVVTGVLGLLINVGARTVERRALAWHQSVRGE 254


>gi|27379319|ref|NP_770848.1| hypothetical protein bll4208 [Bradyrhizobium japonicum USDA 110]
 gi|27352470|dbj|BAC49473.1| bll4208 [Bradyrhizobium japonicum USDA 110]
          Length = 256

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T   ++    + + + I + +   + P +S  + P    L   P     PL++   SY
Sbjct: 62  LVTAIEILGGFALGAFVGITLAVIFSWAPLVSMVLLPLFVTLNMIPKVALGPLLIVWFSY 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             + PN+ ++  + F   + IL     G      D  ++  S   + W  +R I LPG  
Sbjct: 122 G-IVPNILIAFSICF---FPILLTTARGLREVEPDLLDLVKSLRGSRWTLFRKIQLPGSL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY  +G       A   +IV E  +         GLG  + +       P +V+ V+++ 
Sbjct: 178 PYVFSGMKVGAILAVAGAIVGEFIA------SERGLGYLMIQVQSSLDTPAMVMAVVLLT 231

Query: 564 CFVLALNRFL 573
              +AL   +
Sbjct: 232 LLGVALYGLV 241



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 95/247 (38%), Gaps = 14/247 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R F  I  +   VLV+  + +    + +  +P  +  +  +    ++       T + +L
Sbjct: 10  RSFAIILIVHLAVLVLWQVAVDAFHVPKFILPSPLATVQTLGTASYAWGSNTLVTAIEIL 69

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +        A + + +  + MVL+P+   +  IP +      +V+F          
Sbjct: 70  GGFALGAFVGITLAVIFSWAPLVSMVLLPLFVTLNMIPKVALGPLLIVWFSYGI------ 123

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +  I   F+   + +  +  + L  +  DL ++ +S R S W  F  + +P S+P + 
Sbjct: 124 --VPNILIAFSICFFPILLTTARGLREVEPDLLDLVKSLRGSRWTLFRKIQLPGSLPYVF 181

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             M +        ++A    +VG+ +    G+G  +       D  A++ A++ +  +  
Sbjct: 182 SGMKVG------AILAVAGAIVGEFIASERGLGYLMIQVQSSLDTPAMVMAVVLLTLLGV 235

Query: 254 LYDQLLF 260
               L+ 
Sbjct: 236 ALYGLVL 242


>gi|305662629|ref|YP_003858917.1| ABC-type anion transport system duplicated permease component
           [Ignisphaera aggregans DSM 17230]
 gi|304377198|gb|ADM27037.1| ABC-type anion transport system duplicated permease component
           [Ignisphaera aggregans DSM 17230]
          Length = 263

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 2/193 (1%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
            +  Y L I    +   + +     +I     +              +++ RV ++I I+
Sbjct: 34  SKYVYRLTISTSIIALIILLYYFLHNILLGNINIFEYPWTEATIALLLSLSRVTIVIFIS 93

Query: 398 -SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
            ++I +      G   +    +   +++L++  A +++P+    +    L P +    +M
Sbjct: 94  FTVISLAAFYVYGKSKYAKYILVLLSEILSSISAFLWWPIFSLALLNNILPPLIVSLFIM 153

Query: 457 IFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             GT WYI+FNV ++  S       E+AS + ++G++ +  I +P + P  + G   A G
Sbjct: 154 FQGTAWYIVFNVPLSPPSESEKRLLEMASVYRLSGFKKFSKIFIPSMMPRILAGLSAAWG 213

Query: 516 GAWNASIVSEVAS 528
           GAWN++I +E AS
Sbjct: 214 GAWNSTIAAEYAS 226



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 8/188 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +I +I +L + +    +    +   P T    +L    SR T+ +  +  +  L  F   
Sbjct: 46  IIALIILLYYFLHNILLGNINIFEYPWTEATIALLLSLSRVTIVIFISFTVISLAAF--- 102

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            +  KS+    +LV + +I+ SI    +       F       ++   + ++F +F    
Sbjct: 103 YVYGKSKYAKYILVLLSEILSSISAFLWWPI----FSLALLNNILPPLIVSLFIMFQGTA 158

Query: 148 WNMTFSMYQSLCNI-PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           W + F++  S  +   + L E++  +RLSG++KF  + +P  MP ++  +  +  G W  
Sbjct: 159 WYIVFNVPLSPPSESEKRLLEMASVYRLSGFKKFSKIFIPSMMPRILAGLSAAWGGAWNS 218

Query: 207 VVASEMIV 214
            +A+E   
Sbjct: 219 TIAAEYAS 226


>gi|254227574|ref|ZP_04921006.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262396163|ref|YP_003288016.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sp. Ex25]
 gi|151940186|gb|EDN59012.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339757|gb|ACY53551.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio sp. Ex25]
          Length = 266

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 26/279 (9%)

Query: 1   MFLYNILPPFISRR---IFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVP 53
           M  YN +   IS++     P +  L++  +++G+  +++            P +++D + 
Sbjct: 4   MTQYNSVSARISKKERVTHPALRLLISAAVILGLWQLIVVVFDMPSFILPSPIEVLDRLV 63

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
              DV  L ++   T   +L  + + L    ++A        L   L+PIL   Q+IP+ 
Sbjct: 64  TRYDV--LLKHTWVTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVF 121

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +++       KV+ A +   F + T          Y  L N P    +++++  
Sbjct: 122 AIAPVLMLWLGYGIASKVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMG 173

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S WQ   ++ +P ++P L   + +++      V+A    VVG+ V    G+G  +  A 
Sbjct: 174 ASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQAN 227

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
               +  +  A+  +  +          L +  I W NK
Sbjct: 228 ARMIIDEMFAALFILAALSIALYFTTDKLLKKAIPWENK 266



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAA 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|158313026|ref|YP_001505534.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158108431|gb|ABW10628.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 367

 Score = 90.8 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 12/243 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +P I  L  F+LV  I+             P D +      L          RT  R  
Sbjct: 73  TWPKIAALALFLLVWQIVVWSGWKPTYVLPGPGDTLPEFFDQLGTAEFWDAFGRTLTRAG 132

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++++   V   + A+   L   +   +  +Q++P + ++   ++ F          
Sbjct: 133 EGYAVAVVLGGVVGLVVARFGLLRAAVGSFITALQTMPSVVWVPLAILLFKLN------- 185

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +F +      ++   +   +  +P  L  V RS    G+  + ++  P + P ++
Sbjct: 186 -ESAIMFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGARGFSLYRHVVAPAAFPSVL 244

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +    +  W  ++A E+IV+   V   P IG+ +  A    D + ++ +MLT+  +  
Sbjct: 245 AGLKQGWAFAWRSLMAGELIVI---VPGHPSIGADLQNARDLSDTVGVMVSMLTIFVIGV 301

Query: 254 LYD 256
             D
Sbjct: 302 AVD 304



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 85/258 (32%), Gaps = 14/258 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIW 381
           +             +     +  +  F +V  + +   W+    +     T  +    + 
Sbjct: 57  LPVSSGRPTAGRIWSVTWPKIAALALFLLVWQIVVWSGWKPTYVLPGPGDTLPEFFDQLG 116

Query: 382 LGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     T+ R      +A ++   VG+ +     + + +  F   L   P+ V+ P
Sbjct: 117 TAEFWDAFGRTLTRAGEGYAVAVVLGGVVGLVVARFGLLRAAVGSFITALQTMPSVVWVP 176

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +             +  +++ G    +   VI G    P     V  S    G+  +R
Sbjct: 177 LAILLFKL----NESAIMFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGARGFSLYR 232

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++ P  FP  + G       AW + +  E+      H     +GA +  + +      V
Sbjct: 233 HVVAPAAFPSVLAGLKQGWAFAWRSLMAGELIVIVPGHPS---IGADLQNARDLSDTVGV 289

Query: 556 VLGVLIMCCFVLALNRFL 573
           ++ +L +    +A++   
Sbjct: 290 MVSMLTIFVIGVAVDAVF 307


>gi|28899989|ref|NP_799644.1| ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363283|ref|ZP_05776152.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
 gi|260880570|ref|ZP_05892925.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
 gi|260898477|ref|ZP_05906973.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28808272|dbj|BAC61477.1| ABC transporter permease protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085008|gb|EFO34703.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308091930|gb|EFO41625.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
 gi|308112043|gb|EFO49583.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
          Length = 266

 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 26/279 (9%)

Query: 1   MFLYNILPPFISRR---IFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVP 53
           M  YN +   IS++     P +  L++  +++G+  +++            P +++D + 
Sbjct: 4   MTQYNSVSARISKKERVTHPVLRLLISAAVILGLWQLIVVVFDMPNFILPSPIEVLDRLI 63

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
              DV  L ++   T   +L  + + L    ++A        L   L+PIL   Q+IP+ 
Sbjct: 64  TRYDV--LLKHTWVTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVF 121

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +++       KV+ A +   F + T          Y  L N P    +++++  
Sbjct: 122 AIAPVLMLWLGYGIASKVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMG 173

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S WQ   ++ +P ++P L   + +++      V+A    VVG+ V    G+G  +  A 
Sbjct: 174 ASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQAN 227

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
               +  +  A+  +  +          L +  I W NK
Sbjct: 228 ARMIIDEMFAALFILAALSIALYFTTDKLLKKAIPWENK 266



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAA 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|220922935|ref|YP_002498237.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947542|gb|ACL57934.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 273

 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 17/249 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
             +  L         P  ++  +          ++   T    L    + +    V  T+
Sbjct: 30  AAVWTLAIPAYILPPPSAVLTALYRGFASTLYLEHIWVTLYETLLGFFLGVALAVVLGTV 89

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A +R +   L P + + Q++P +      +V+F      KV+ A L A F         
Sbjct: 90  VALNRTVEYFLYPFIVMFQAMPKVALAPLIIVWFGLGLTSKVVNAALVAFF--------P 141

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    L +   D   + RS   +  Q FW L +P +MP +   + ++M       + 
Sbjct: 142 LMVNTIVGLRSAEEDRLNLMRSLAATRTQIFWMLQLPNAMPYIFAGLEIAMIFALIGAIV 201

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
           +E +          G+G  I       D+      +L +  +   ++ ++    R ++ W
Sbjct: 202 AEFVG------AQAGLGMLIQSMNFSLDVAGQFSVLLILSVMGLAFNSMIVFARRRVLFW 255

Query: 267 SNKFRLERT 275
               + +  
Sbjct: 256 DENQKKDTD 264



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 75/227 (33%), Gaps = 13/227 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W   +    +      +  +   F     L  IW   +T++  ++   +   + + +G 
Sbjct: 32  VWTLAIPAYILPPPSAVLTALYRGFASTLYLEHIW---VTLYETLLGFFLGVALAVVLGT 88

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +     +   + PF  +  A P     PL++        +  +  +L+      + ++ 
Sbjct: 89  VVALNRTVEYFLYPFIVMFQAMPKVALAPLIIVWFGLGLTSKVVNAALV----AFFPLMV 144

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G  +   D   +  S   T  + +  + LP   PY   G   A   A   +IV+E 
Sbjct: 145 NTIVGLRSAEEDRLNLMRSLAATRTQIFWMLQLPNAMPYIFAGLEIAMIFALIGAIVAEF 204

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      GLG  I               +LI+    LA N  +
Sbjct: 205 VG------AQAGLGMLIQSMNFSLDVAGQFSVLLILSVMGLAFNSMI 245


>gi|91780183|ref|YP_555390.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692843|gb|ABE36040.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 352

 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +   +    ++ ++     G+ IG+   +S  + P  +L+   PA  + PL         
Sbjct: 158 SFGLLAYGYVLGAVAGFVTGVSIGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFFFPSSF 217

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+   T + +     +G ++    + ++A +           + +P   P 
Sbjct: 218 S----ASVFLIALATAFPVAVLTWSGVASVNPAYYDIARTLGARPSFLILRVAIPAALPS 273

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +++  IV+E+           GLG Y+  +    ++  +   +L+M   
Sbjct: 274 VFVGLFMGLGASFSVLIVAEMMG------VKAGLGWYLQWAQGWAAYSNMYAALLVMALM 327

Query: 566 VLALNRFLWH 575
              L   L+ 
Sbjct: 328 CSGLITLLFR 337



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 87/252 (34%), Gaps = 22/252 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLRMLSAMVI 78
              L +G+        Q   +PR         +     D   L      +   +    V+
Sbjct: 109 LLALALGVSAWEAVTAQLEWLPRPFFAPPQALIGVFAEDYPRLGSSVVHSFGLLAYGYVL 168

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +  FV       S+ +   + P+L ++  +P   +L     +           +  A+
Sbjct: 169 GAVAGFVTGVSIGWSQAVSYWVHPVLRLIGPLPATAWLPLAFFF--------FPSSFSAS 220

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  + ++     +++R+           + +P ++P +   + M
Sbjct: 221 VFLIALATAFPVAVLTWSGVASVNPAYYDIARTLGARPSFLILRVAIPAALPSVFVGLFM 280

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  ++ +EM+ V        G+G Y+  A        +  A+L M  +      L
Sbjct: 281 GLGASFSVLIVAEMMGVKA------GLGWYLQWAQGWAAYSNMYAALLVMALMCSGLITL 334

Query: 259 LFR---PMIVWS 267
           LFR    ++ W 
Sbjct: 335 LFRVRDRLLAWQ 346


>gi|254486618|ref|ZP_05099823.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043487|gb|EEB84125.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 257

 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 77/232 (33%), Gaps = 10/232 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +   + W  +   + +          +    +     ++     T++  +   ++   I 
Sbjct: 16  FGFFLMWEVLCVLLNVSDLVLPRPSEILVTLWVKFPILLPHIIQTLYSTLTGFVLGVGIG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ +G      +   P     ++ P     P+ V               L  +    
Sbjct: 76  VALGVIVGTSKVAYAVAYPLLVGFSSIPKVAVVPIFVLWFGSGTT----PAILTAMVICV 131

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + I+ N+  G +A   D ++V  +   +       + LP   PY+      A   ++  +
Sbjct: 132 FPIVVNIATGLAATEPDLEDVLKTLGASKSEILWNVGLPRTMPYFFAALKVAITLSFVGA 191

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++SE  +         G+G  +  ++       V  G++I+    +AL    
Sbjct: 192 VLSETVA------SNRGIGNVMMTASSNFQVSLVFAGLIILALLGVALYALF 237



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 98/251 (39%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  F L+  ++ +LL  + +  +PR    +V + +    L  +  +T    L+  V+ + 
Sbjct: 15  LFGFFLMWEVLCVLL-NVSDLVLPRPSEILVTLWVKFPILLPHIIQTLYSTLTGFVLGVG 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    V  P+L    SIP +  +   V++F +            AI  
Sbjct: 74  IGVALGVIVGTSKVAYAVAYPLLVGFSSIPKVAVVPIFVLWFGSG--------TTPAILT 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                V+ +  ++   L     DLE+V ++   S  +  W +G+P +MP     + ++++
Sbjct: 126 AMVICVFPIVVNIATGLAATEPDLEDVLKTLGASKSEILWNVGLPRTMPYFFAALKVAIT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +   V SE +          GIG+ +  A     +  +   ++ +  +      L   
Sbjct: 186 LSFVGAVLSETVASN------RGIGNVMMTASSNFQVSLVFAGLIILALLGVALYALFSV 239

Query: 259 LFRPMIVWSNK 269
           L R +  W+ +
Sbjct: 240 LERRVTGWATR 250


>gi|46203697|ref|ZP_00051132.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 193

 Score = 90.8 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 17/182 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
                   +   I+ +++ IP L ++ F +++F             AA+F I     W +
Sbjct: 27  GMFGWFESLTAGIVRLLRPIPGLAWVPFAIIWFGV--------QPSAAVFIIAVGVFWIV 78

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
            F+   ++  + RDL EV+++F   G W +   + +P + PG++  +  ++   W  VVA
Sbjct: 79  FFATQGAVRGVDRDLIEVAKAFGFRGAWPRLTKILLPAATPGILVGLRTALGQAWMAVVA 138

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +E+  V       PGIG+ +  A        ++  MLTM  +  L+D   F  +  W  +
Sbjct: 139 AEIFGV-------PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFDT-GFVALQGWLLR 190

Query: 270 FR 271
           +R
Sbjct: 191 WR 192



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 12/163 (7%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G      S      +LL   P   + P  +                ++  G  W + F  
Sbjct: 27  GMFGWFESLTAGIVRLLRPIPGLAWVPFAIIWFGVQPS----AAVFIIAVGVFWIVFFAT 82

Query: 469 IAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                    D  EVA +F   G W     I+LP   P  + G  TA G AW A + +E+ 
Sbjct: 83  QGAVRGVDRDLIEVAKAFGFRGAWPRLTKILLPAATPGILVGLRTALGQAWMAVVAAEIF 142

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                     G+GA + +++   S   VV+ +L M       +
Sbjct: 143 G-------VPGIGARMMQASSLLSTDIVVVYMLTMAALYGLFD 178


>gi|288958181|ref|YP_003448522.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288910489|dbj|BAI71978.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 250

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 100/253 (39%), Gaps = 17/253 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            + +I  +   ++ F+L    +    +   +    P  +        +  +       + 
Sbjct: 3   TTHKIALSALGVVVFLLAWEAVARSGVVPARLLPSPSAVPAAFFTEFNSGTWQAMVLASL 62

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
              L  + +       + T AA   +       ++ +++ IP + ++ F +++F      
Sbjct: 63  SHYLVGLSLGTFLGVSFGTAAALWIKWDAFQAWVVRMLRPIPAIAWIPFAIIWFGV---- 118

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW-QKFWYLGVPFS 188
               +E AA F I  +  W   ++ Y ++  + +DL E+  +F   G   + + + +P +
Sbjct: 119 ----SEGAASFLIALTVFWINYYASYAAVRGVDKDLIELGYAFGQGGLVPRLFKIILPGA 174

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PG++  +   +  GW  VVA+E+  +        G+G  +  A        ++  M+T+
Sbjct: 175 LPGILSGLRAGLGQGWMTVVAAELFGIS-------GLGMRMMEASGLLATHIVVLYMVTI 227

Query: 249 LGVIFLYDQLLFR 261
             +  + D L  +
Sbjct: 228 ALLYGVSDFLFMQ 240



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 12/193 (6%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           +   ++   +V + + + + +  G          +      ++L   PA  + P  +   
Sbjct: 57  MVLASLSHYLVGLSLGTFLGVSFGTAAALWIKWDAFQAWVVRMLRPIPAIAWIPFAIIWF 116

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILP 500
                      S L+     W   +   A       D  E+  +F   G       IILP
Sbjct: 117 GVSEG----AASFLIALTVFWINYYASYAAVRGVDKDLIELGYAFGQGGLVPRLFKIILP 172

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  ++G     G  W   + +E+          +GLG  + E++   +   VVL ++
Sbjct: 173 GALPGILSGLRAGLGQGWMTVVAAELFGI-------SGLGMRMMEASGLLATHIVVLYMV 225

Query: 561 IMCCFVLALNRFL 573
            +       +   
Sbjct: 226 TIALLYGVSDFLF 238


>gi|78062608|ref|YP_372516.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77970493|gb|ABB11872.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 364

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 91/289 (31%), Gaps = 17/289 (5%)

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             + F  ++    F+  +  +  L      +    P    +L   +     L      + 
Sbjct: 70  RVVGFSDWAYTGEFAVGAWTIAALLLVAATLGHLVPATRTRLARVRPAGPWLVALPLVLA 129

Query: 353 CG--VAIGIAWQSIGYIVNH-----FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V     W    +             D   ++     T+  + +      ++   VG
Sbjct: 130 AWEIVTAKTGWLPTPFFAPPQALIEVYADDWPRLLGSAGNTLKLLGLGFAYGVVVGFAVG 189

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + IG+   I   + P  ++L   PA    PL        +       + L+   T + + 
Sbjct: 190 VSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFFPSSYS----AAAFLIALATGFPVA 245

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +G ++    + +VA +           + +P   P+   G       ++   +V+E
Sbjct: 246 VLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAE 305

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +          +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 306 MMG------VKSGLGWYLSWAQGWASYVNMYAALIVMALLFSGLIALLF 348



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 94/250 (37%), Gaps = 17/250 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTL 70
           R+ P    L+A  LV+    I+         P        I +   D   L   A  T  
Sbjct: 113 RVRPAGPWLVALPLVLAAWEIVTAKTGWLPTPFFAPPQALIEVYADDWPRLLGSAGNTLK 172

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       ++  F        SRR+G  + P+L ++  +P    L  T  +F       
Sbjct: 173 LLGLGFAYGVVVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF------- 225

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              +  AA F I  +  + +    +  + ++ +   +V+R+   +       + +P ++P
Sbjct: 226 -PSSYSAAAFLIALATGFPVAVLTWSGVASVNKQYYDVARTLGANARFLVLRVAIPAALP 284

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + M +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  
Sbjct: 285 HVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMAL 338

Query: 251 VIFLYDQLLF 260
           +      LLF
Sbjct: 339 LFSGLIALLF 348


>gi|315658931|ref|ZP_07911798.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
 gi|315496055|gb|EFU84383.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
          Length = 504

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 76/191 (39%), Gaps = 26/191 (13%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                +  K++R+  +++ I  ++Q+IP L  L   +  F            + AI A+ 
Sbjct: 38  VPLGIVLTKAKRISEIVMNIAAVLQTIPSLALLGLMIPLFGIG--------RVPAIIALV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  +  +   L E ++   +  +++   + +P +MP ++  +  +M   
Sbjct: 90  VYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGIRTAM--- 146

Query: 204 WFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                   ++++G   +    IG+      I L I   +   IL   +    +  ++D +
Sbjct: 147 --------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNPSLILIGAIPAALLAIIFDVI 197

Query: 259 LFRPMIVWSNK 269
           L R M   S K
Sbjct: 198 L-RLMAKLSYK 207



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 12/186 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI +     IS  +   A +L   P+     L++       +   + L +  +    
Sbjct: 38  VPLGIVLTKAKRISEIVMNIAAVLQTIPSLALLGLMIPLFGIGRVPAIIALVVYALL--- 94

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N   G         E A    +  +R    + LP   P  + G  TA       +
Sbjct: 95  -PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGIRTAMVLIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++ +   G +               ++ +   +++G +      +  +  L   +    
Sbjct: 154 TLAALIGAGGLGDLIL-------LGIDRNNPSLILIGAIPAALLAIIFDVIL-RLMAKLS 205

Query: 582 TRCLRL 587
            + L L
Sbjct: 206 YKKLML 211


>gi|254517780|ref|ZP_05129836.1| glycine betaine/L-proline ABC transporter [Clostridium sp.
           7_2_43FAA]
 gi|226911529|gb|EEH96730.1| glycine betaine/L-proline ABC transporter [Clostridium sp.
           7_2_43FAA]
          Length = 527

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 67/176 (38%), Gaps = 15/176 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                    K+++L   ++   ++ Q+IP L  L F +                 AI  +
Sbjct: 37  GVPLGIFITKNKKLASGVIGFANLTQAIPSLAILGFLIPVIGIG--------SAPAITMV 88

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  + Y  + NI  D+ E ++   ++  Q    + +P +MP ++  + M+   
Sbjct: 89  VLYSMLPIIKNTYTGITNINPDMLEAAKGLGMTSGQTLKLIKIPLAMPVMMAGIRMA--- 145

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               V A  ++ +    +   G+G  +   I+  D   IL+  +    +  + D +
Sbjct: 146 ---AVTAVGLMTIAAF-VGAGGLGYLVFSGIQTVDNNLILFGAIPAAILALVIDWI 197



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 11/170 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI+I     ++S +  FA L  A P+      ++  +       +     +++  +
Sbjct: 37  GVPLGIFITKNKKLASGVIGFANLTQAIPSLAILGFLIPVIGIG----SAPAITMVVLYS 92

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N   G +    D  E A    +T  +  + I +P   P  + G   A   A   
Sbjct: 93  MLPIIKNTYTGITNINPDMLEAAKGLGMTSGQTLKLIKIPLAMPVMMAGIRMAAVTAVGL 152

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             ++     G       GLG  +    +      ++ G +      L ++
Sbjct: 153 MTIAAFVGAG-------GLGYLVFSGIQTVDNNLILFGAIPAAILALVID 195


>gi|229819722|ref|YP_002881248.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229565635|gb|ACQ79486.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 288

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 90/245 (36%), Gaps = 16/245 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
               N      F +V  I+  +    +   +       + +   +  L   A  T   +L
Sbjct: 41  DFLANALGAPPFYVVAVILVAIAFLARGWKLAAGSAVGLFVIYGMG-LWSSAMDTLALVL 99

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A  I+L         AA++  +  +L P++D +Q++P   +L  TV+ F+    G V G
Sbjct: 100 LASFIALAIGIPLGIWAARNATVSRILRPVMDFLQTLPAFVYLIPTVIIFL---TGAVPG 156

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                IFAI     +         +  +  ++ E   +F  S  +    + +P +MP ++
Sbjct: 157 IVATVIFAIAPGVRF-----TELGIRQVDSEVVEAGEAFGSSRGRILRQIQIPLAMPTIM 211

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +      VV + ++  G            +  A++   +     A L ++ +  
Sbjct: 212 AGVNQVIMLALSMVVVAGLVGAGGLGND-------VVSALQRVRIGPGFEAGLAVVILAI 264

Query: 254 LYDQL 258
             D++
Sbjct: 265 FLDRV 269



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 4/182 (2%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           +N   +    +    +V    +   W+              + +      T+  V++   
Sbjct: 44  ANALGAPPFYVVAVILVAIAFLARGWKLAAGSAVGLFVIYGMGLWSSAMDTLALVLLASF 103

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           IA  I IP+GIW      +S  ++P    L   PA V+    V       +   +   + 
Sbjct: 104 IALAIGIPLGIWAARNATVSRILRPVMDFLQTLPAFVYLIPTVIIFLTGAVPGIVATVIF 163

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            I     +       G     ++  E   +F  +  R  R I +P   P  + G      
Sbjct: 164 AIAPGVRF----TELGIRQVDSEVVEAGEAFGSSRGRILRQIQIPLAMPTIMAGVNQVIM 219

Query: 516 GA 517
            A
Sbjct: 220 LA 221


>gi|300691821|ref|YP_003752816.1| ABC-type transport system, permease [Ralstonia solanacearum PSI07]
 gi|299078881|emb|CBJ51542.1| putative ABC-type transport system, permease component [Ralstonia
           solanacearum PSI07]
          Length = 263

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P +S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFGIGTATGLGAGLWLALSPSVSAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L L+     +   L  +
Sbjct: 234 VFALLLDWLVGLVEKRLMRW 253



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S  +  VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFGIGTATGLGAGLWLALSPSVSAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
             ++ +     L D    L+ + ++ W  K
Sbjct: 227 AGIVVLTVFALLLDWLVGLVEKRLMRWQPK 256


>gi|159045085|ref|YP_001533879.1| binding-protein-dependent transport system protein [Dinoroseobacter
           shibae DFL 12]
 gi|157912845|gb|ABV94278.1| binding-protein-dependent transport system protein [Dinoroseobacter
           shibae DFL 12]
          Length = 287

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 16/246 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSI-GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           +     +  F +V  + +   W+++   I          Y++    IT+  V+    +A 
Sbjct: 43  IGTWQLVTSFGLVSPIILPTPWETLKDMIFVGQNLLSGGYMLGALWITVKEVIYGFALAI 102

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            I   +G+ +G        + P+   +   P   F PL V+ + +   +       L  F
Sbjct: 103 AIGFSLGVLVGETAFGEKAVMPYLVAIDTMPKVAFAPLFVAWLGFGIESK----VALAAF 158

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              + I+    AG  A   + + +  +   +  +    + LP   P   TG      G  
Sbjct: 159 IATFPIVVGTAAGLHAADENARMLFKTMGASRMQTLIKMKLPTGLPQIFTGLKIGAVGVM 218

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             +I  E    G       G G  I  +  + + P V   +L +    L L   +     
Sbjct: 219 AGAITGEFLGGGK------GFGELIRVAASQLNTPRVFSLILYLSLVGLTLYLLV----- 267

Query: 579 LYGTRC 584
            +  R 
Sbjct: 268 QWTQRR 273



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 64/204 (31%), Gaps = 14/204 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +      T   ++    +++   F    L  ++      ++P L  + ++P + F
Sbjct: 78  LSGGYMLGALWITVKEVIYGFALAIAIGFSLGVLVGETAFGEKAVMPYLVAIDTMPKVAF 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               V +       KV  A   A F         +       L     +   + ++   S
Sbjct: 138 APLFVAWLGFGIESKVALAAFIATF--------PIVVGTAAGLHAADENARMLFKTMGAS 189

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P  +P +   + +   G     +  E +  G       G G  I +A  +
Sbjct: 190 RMQTLIKMKLPTGLPQIFTGLKIGAVGVMAGAITGEFLGGGK------GFGELIRVAASQ 243

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            +   +   +L +  V      L+
Sbjct: 244 LNTPRVFSLILYLSLVGLTLYLLV 267


>gi|326777382|ref|ZP_08236647.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326657715|gb|EGE42561.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 296

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 85/211 (40%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L ++   +  R+L      +    V   L      + +VL P +  ++++P L + + 
Sbjct: 96  HTLIEHLGISLRRILVGAGAGVAAGLVTGVLMGTLPWVRVVLEPAVAFLRTLPPLAYFSL 155

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E   ++ +  + +  +  +   ++ + P  L E +R+      Q
Sbjct: 156 LIIWFGID--------EAPKLWLLAIAAMPPVAVATASAVASAPTALVEAARAIGARRGQ 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + ++    +  VVA+E +        LPGIG  I  A +    
Sbjct: 208 VVTSVVLPSALPEILVGVRLAFGIAYSSVVAAETV------NGLPGIGGLIRDAQRYNQS 261

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +  +     L D   +LL   +  W
Sbjct: 262 DTVVLGLFAIGISGLLIDAALRLLSDRLAPW 292



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R++V         +  G+ +G  P +   ++P    L   P   +F L++     
Sbjct: 103 GISLRRILVGAGAGVAAGLVTGVLMGTLPWVRVVLEPAVAFLRTLPPLAYFSLLIIWFGI 162

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L++         +     +  ++ P    E A +      +    ++LP   
Sbjct: 163 DEAPKLWLLAI----AAMPPVAVATASAVASAPTALVEAARAIGARRGQVVTSVVLPSAL 218

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G A+++ + +E  +         G+G  I ++        VVLG+  + 
Sbjct: 219 PEILVGVRLAFGIAYSSVVAAETVNG------LPGIGGLIRDAQRYNQSDTVVLGLFAIG 272

Query: 564 CFVLALN---RFLWHPLYLY 580
              L ++   R L   L  +
Sbjct: 273 ISGLLIDAALRLLSDRLAPW 292


>gi|315303149|ref|ZP_07873820.1| BilEB [Listeria ivanovii FSL F6-596]
 gi|313628480|gb|EFR96942.1| BilEB [Listeria ivanovii FSL F6-596]
          Length = 504

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + RRL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHRRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHRRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|153838468|ref|ZP_01991135.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810]
 gi|260902296|ref|ZP_05910691.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|149748144|gb|EDM59003.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810]
 gi|308110544|gb|EFO48084.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
          Length = 266

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 17/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L  
Sbjct: 31  AAVILGLWQLIVVVFDMPSFILPSPIEVLNRLVTRYDVLLKHTWVTAQEILLGLALGLSM 90

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F +
Sbjct: 91  GLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYSIASKVVMAAIIIFFPV 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++  
Sbjct: 151 TTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV-- 200

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               V+A    VVG+ V    G+G  +  A     +  +  A+  +  +          L
Sbjct: 201 ----VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAALSIALYFTTDKL 256

Query: 260 FRPMIVWSNK 269
            +  I W NK
Sbjct: 257 LKKAIPWENK 266



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYS 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAA 244

Query: 565 FVLAL 569
             +AL
Sbjct: 245 LSIAL 249


>gi|307331031|ref|ZP_07610161.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306883328|gb|EFN14384.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 314

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 74/214 (34%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+       +    L  Y   T    L+   I +        L A+S      L 
Sbjct: 101 LPAPLDLARHFLDDVLHGDLVDYTKETVWEALAGSGIGIGVALPLGYLIARSELAAAALQ 160

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +       ++         +   L   F         +  +    L ++
Sbjct: 161 PYVAASQAMPAVALAPLLALWIGYGLLPIAVLCALLVFF--------PILVNTVLGLRSL 212

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D+   +R   +  W   WY+ +P ++P ++  +   ++      V  E ++ GD    
Sbjct: 213 DPDVMGAARVDGVGWWGMLWYIELPLALPSVLAGVRNGLTLSITGAVVGEFVMGGD---- 268

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  +++  +E D + +   ++ +  +  + 
Sbjct: 269 --GLGQLLSVQRQEADTIGLFSTLVMLGLLAAVL 300



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 19/254 (7%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMF 388
           F  +        +L + W  V    A+   +      +      DVL+  ++     T++
Sbjct: 70  FRGVLPPLVFGLLLLVVWDIVTRTGAVAEFYLPAPLDLARHFLDDVLHGDLVDYTKETVW 129

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    I   + +P+G  I      ++ +QP+     A PA    PL+   + Y  L  
Sbjct: 130 EALAGSGIGIGVALPLGYLIARSELAAAALQPYVAASQAMPAVALAPLLALWIGYGLLPI 189

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +LL+ F     IL N + G  +   D    A    +  W    YI LP   P  + 
Sbjct: 190 AVLCALLVFF----PILVNTVLGLRSLDPDVMGAARVDGVGWWGMLWYIELPLALPSVLA 245

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC---- 564
           G       +   ++V E    G       GLG  ++   ++     +   ++++      
Sbjct: 246 GVRNGLTLSITGAVVGEFVMGGD------GLGQLLSVQRQEADTIGLFSTLVMLGLLAAV 299

Query: 565 ---FVLALNRFLWH 575
               V  + R +  
Sbjct: 300 LYGVVRLVERLVQR 313


>gi|21240957|ref|NP_640539.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21106240|gb|AAM35075.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 489

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L Q+       + S++  +LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGVTPASDTDSRLTRLLQHTREHLALVGSSLGFALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 369 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 422

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  DL  IL   +    V+ L  Q LF  +  W+
Sbjct: 423 VGTATLG-ALIGAGGYGQPILAGIRLDDLGLILEGAIP-AAVLALLVQALFEGVERWA 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 11/164 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++                 +   +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 434

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G       G G  I           ++ G +      L +    
Sbjct: 435 G-------GYGQPILAGIRLDDLGLILEGAIPAAVLALLVQALF 471


>gi|188591202|ref|YP_001795802.1| ABC transporter inner membrane protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938096|emb|CAP63080.1| putative ABC transport system, inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 258

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +V   +A  + + +G+ +G    + +   P      A P   F P++V       
Sbjct: 67  TFWTTMVGFGVAIGVGVLLGLAMGSSRLLYAASYPLMTAFNALPKAAFVPILVVWFGLGA 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ N+  G +    + ++V              + LP   PY
Sbjct: 127 G----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRRDVLFKVGLPRALPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+      +    G+G  +  +      P    G++++   
Sbjct: 183 FFASLKVAITLAFVGTTVSEM------NAANEGIGYLLVSAGSAMKMPLAFAGLVVIAVM 236

Query: 566 VLALNRFL 573
            +A+    
Sbjct: 237 AMAMYELF 244



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 85/238 (35%), Gaps = 17/238 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +   + +  +P     +  +      +  +A RT    +    +++    +       SR
Sbjct: 34  MAFDVSDFILPTPSAIVAALADYADVIAGHAWRTFWTTMVGFGVAIGVGVLLGLAMGSSR 93

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L     P++    ++P   F+   VV+F              AI   F    + +  ++
Sbjct: 94  LLYAASYPLMTAFNALPKAAFVPILVVWFGLGAGP--------AILTAFLISFFPIMVNI 145

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +  +LE+V R          + +G+P ++P    ++ ++++  +     SEM  
Sbjct: 146 ATGLATLEPELEDVLRVLGAKRRDVLFKVGLPRALPYFFASLKVAITLAFVGTTVSEMNA 205

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
             +      GIG  +  A     +      ++ +  +     +L   + + M  W+++
Sbjct: 206 ANE------GIGYLLVSAGSAMKMPLAFAGLVVIAVMAMAMYELFAVVEKRMTGWAHR 257


>gi|167757644|ref|ZP_02429771.1| hypothetical protein CLORAM_03194 [Clostridium ramosum DSM 1402]
 gi|167702641|gb|EDS17220.1| hypothetical protein CLORAM_03194 [Clostridium ramosum DSM 1402]
          Length = 523

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 61/173 (35%), Gaps = 11/173 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI I +       +   A ++ A P+      ++  +            +++I  +
Sbjct: 40  GVPLGIIITYFKPSKKPVMAIANIIQAIPSMALLGFMIPLLGIGTK----PAIVMVILYS 95

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N +AG  +  +D  E A    +T  +    + +P   P  + G   +   +   
Sbjct: 96  LLPIIKNTVAGLDSINSDTLEAAKGIGLTPMQVLYKVQIPLAAPVIMAGVRISAVSSVGL 155

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++     G       GLG  +       +  +++ G +  C   L ++   
Sbjct: 156 MTLAAFIGAG-------GLGYLVYAGIRTVNNAQILAGAIPACILALLIDYIF 201



 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +    +     ++ I +I+Q+IP +  L F +                 AI  +
Sbjct: 40  GVPLGIIITYFKPSKKPVMAIANIIQAIPSMALLGFMIPLLGIG--------TKPAIVMV 91

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +    L +I  D  E ++   L+  Q  + + +P + P ++  + +S   
Sbjct: 92  ILYSLLPIIKNTVAGLDSINSDTLEAAKGIGLTPMQVLYKVQIPLAAPVIMAGVRIS--- 148

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V+S  ++     I   G+G  +   I+  +   IL   +    +  L D + 
Sbjct: 149 ----AVSSVGLMTLAAFIGAGGLGYLVYAGIRTVNNAQILAGAIPACILALLIDYIF 201


>gi|327538162|gb|EGF24846.1| ABC transporter, permease protein putative membrane protein
           [Rhodopirellula baltica WH47]
          Length = 271

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 88/247 (35%), Gaps = 6/247 (2%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           IR +  E      +   V+ +    W  VV    +        + V    +Q    ++  
Sbjct: 12  IRGNRSEWAWTAFAVIVVAALGIAAWHFVVKLFDLPKLLLPTPWQVAEAGWQHRDVLLKS 71

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G IT++   V + +A II   V I       +   + P+   L   P     PL+V    
Sbjct: 72  GWITLWTATVSLFVAVIIGGAVSILFSQSRLLRRALFPYVVFLQTVPIVAIAPLLVIWSG 131

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y      +   ++      + I+ NV  G ++   +  ++   +  T W+    + +P  
Sbjct: 132 YEFRTAVIATVII----CLFPIVNNVTTGLTSVRPEHNDLLRMYGATRWQRLCRVQIPTA 187

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ V GA  + G A   +IV+E            GLGA +     +     ++  + + 
Sbjct: 188 IPFLVLGARISSGLAVIGAIVAEFFVSNGADYE--GLGAVMTGWQARTMTDALMAALAVS 245

Query: 563 CCFVLAL 569
               L L
Sbjct: 246 TLLGLIL 252



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 93/254 (36%), Gaps = 22/254 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----------L 61
           S+ I  N  +       + ++  L        V    +  + +                L
Sbjct: 9   SKSIRGNRSEWAWTAFAVIVVAALGIAAWHFVVKLFDLPKLLLPTPWQVAEAGWQHRDVL 68

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T      ++ ++++     + L ++SR L   L P +  +Q++PI+      V+
Sbjct: 69  LKSGWITLWTATVSLFVAVIIGGAVSILFSQSRLLRRALFPYVVFLQTVPIVAIAPLLVI 128

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +          A+ A     ++ +  ++   L ++  +  ++ R +  + WQ+  
Sbjct: 129 WSGYEFR--------TAVIATVIICLFPIVNNVTTGLTSVRPEHNDLLRMYGATRWQRLC 180

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLL 239
            + +P ++P LV    +S        + +E  V         G+G+ +    A    D L
Sbjct: 181 RVQIPTAIPFLVLGARISSGLAVIGAIVAEFFVSNGADYE--GLGAVMTGWQARTMTDAL 238

Query: 240 AILYAMLTMLGVIF 253
               A+ T+LG+I 
Sbjct: 239 MAALAVSTLLGLIL 252


>gi|327461351|gb|EGF07682.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1]
          Length = 506

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGVAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGVAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|237735192|ref|ZP_04565673.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229381968|gb|EEO32059.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 523

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 61/173 (35%), Gaps = 11/173 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI I +       +   A ++ A P+      ++  +            +++I  +
Sbjct: 40  GVPLGIIITYFKPSKKPVMAIANIIQAIPSMALLGFMIPLLGIGTK----PAIVMVILYS 95

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N +AG  +  +D  E A    +T  +    + +P   P  + G   +   +   
Sbjct: 96  LLPIIKNTVAGLDSINSDTLEAAKGIGLTPMQVLYKVQIPLAAPVIMAGVRISAVSSVGL 155

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++     G       GLG  +       +  +++ G +  C   L ++   
Sbjct: 156 MTLAAFIGAG-------GLGYLVYAGIRTVNNAQILAGAIPACILALLIDYIF 201



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 +    +     ++ I +I+Q+IP +  L F +                 AI  +
Sbjct: 40  GVPLGIIITYFKPSKKPVMAIANIIQAIPSMALLGFMIPLLGIG--------TKPAIVMV 91

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +    L +I  D  E ++   L+  Q  + + +P + P ++  + +S   
Sbjct: 92  ILYSLLPIIKNTVAGLDSINSDTLEAAKGIGLTPMQVLYKVQIPLAAPVIMAGVRIS--- 148

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V+S  ++     I   G+G  +   I+  +   IL   +    +  L D + 
Sbjct: 149 ----AVSSVGLMTLAAFIGAGGLGYLVYAGIRTVNNAQILAGAIPACILALLIDYIF 201


>gi|303232824|ref|ZP_07319508.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302481014|gb|EFL44090.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 262

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 83/227 (36%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W   V    I          V H   QD   +      T+   +  ++   I+  
Sbjct: 23  VLIALWQFSVDCGLIANFLLPTPLQVCHAAVQDCALLCQHAQTTLLEALYGLVFGCILGF 82

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            V + +     I   + P   +    P     PL+V  + Y  L       +L+I  T +
Sbjct: 83  VVAVIMDVCAPIRYALSPLITVSQTVPTIAIAPLLVLWLGYGLLPK----VVLVILTTFF 138

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  ++ AG  +   D   +  +   T ++ + Y+ +PG   +  +G   +   A  A++
Sbjct: 139 PITISLTAGFQSVSPDMLNLMKTMGATPFQLFWYVKIPGAIEHAFSGLTISATYAIVAAV 198

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E            GLG Y+    +  S+  +   ++++    LAL
Sbjct: 199 IAEWLGG------YAGLGVYMIRVRKSFSYDRMFAVIVLISALSLAL 239



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 75/199 (37%), Gaps = 14/199 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L Q+A  T L  L  +V   +  FV A +      +   L P++ + Q++P +   
Sbjct: 55  DCALLCQHAQTTLLEALYGLVFGCILGFVVAVIMDVCAPIRYALSPLITVSQTVPTIAIA 114

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++             L  +  +  +  + +T S+     ++  D+  + ++   + 
Sbjct: 115 PLLVLWLGYGL--------LPKVVLVILTTFFPITISLTAGFQSVSPDMLNLMKTMGATP 166

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q FWY+ +P ++      + +S +      V +E +          G+G Y+    K  
Sbjct: 167 FQLFWYVKIPGAIEHAFSGLTISATYAIVAAVIAEWLGG------YAGLGVYMIRVRKSF 220

Query: 237 DLLAILYAMLTMLGVIFLY 255
               +   ++ +  +    
Sbjct: 221 SYDRMFAVIVLISALSLAL 239


>gi|324993085|gb|EGC25005.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK405]
 gi|324995609|gb|EGC27521.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK678]
 gi|332361434|gb|EGJ39238.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1056]
          Length = 506

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|296274328|ref|YP_003656959.1| binding-protein-dependent transporter inner membrane component
           [Arcobacter nitrofigilis DSM 7299]
 gi|296098502|gb|ADG94452.1| binding-protein-dependent transport systems inner membrane
           component [Arcobacter nitrofigilis DSM 7299]
          Length = 245

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 105/245 (42%), Gaps = 15/245 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF  + F+++   +++L++     ++  DIV  +   +    L      T  R+  A  I
Sbjct: 8   IFSFMLFLILWQALSLLINSDLFPSI-IDIVKSLEEHIKNKDLFWNLFITLYRVFVAFFI 66

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++    ++  L    +++      +L +  +IP L  +    ++F           + +A
Sbjct: 67  TMSIGIIFGLLMGFYKKVDDFFDFLLILGLNIPALVTIIICYIWFGL--------TDFSA 118

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I A+  ++V  +  ++ +      +   + ++ ++LS  + F  + +P   P L+    +
Sbjct: 119 ILAVVINKVPIVIVNIREGTKAFDKKYMDFAKIYKLSRKEIFLNIYLPQLYPYLLATTRL 178

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+S  W  V+  E++          GIG  I++  +  D+ +IL      + VI L +  
Sbjct: 179 SLSLIWKIVLVVELLG------RSDGIGFQISMFYQYFDISSILAYSFAFISVILLIEHK 232

Query: 259 LFRPM 263
           + +P+
Sbjct: 233 ILKPI 237



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 10/235 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I W  +   +   +    I  + +   +     + W   IT++RV V   I   I I
Sbjct: 13  LFLILWQALSLLINSDLFPSIIDIVKSLEEHIKNKDLFWNLFITLYRVFVAFFITMSIGI 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G+ +GF   +         L    PA V   +          +      L ++     
Sbjct: 73  IFGLLMGFYKKVDDFFDFLLILGLNIPALVTIIICYIWFGLTDFS----AILAVVINKVP 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++ N+  G  AF   + + A  + ++    +  I LP ++PY +     +    W   +
Sbjct: 129 IVIVNIREGTKAFDKKYMDFAKIYKLSRKEIFLNIYLPQLYPYLLATTRLSLSLIWKIVL 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           V E+        R+ G+G  I+   +      ++         +L +   +  P+
Sbjct: 189 VVELLG------RSDGIGFQISMFYQYFDISSILAYSFAFISVILLIEHKILKPI 237


>gi|296159209|ref|ZP_06842035.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295890468|gb|EFG70260.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 292

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q  + +   +L   ++     FV  +LA  +R    VL  +  +   +P +  L  
Sbjct: 86  GELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVSTRLGRDVLSMLTAMFNPLPSIALLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S +W +  + Y    ++P  L    R++ L+G +
Sbjct: 146 ALLWFGLGTG--------SLLFVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIR 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + +  +  W  ++A+E++    +       G YI     E   
Sbjct: 198 HVLLILVPAALPAILAGLRVGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYT 255

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +   +  ++ +  L + L+F
Sbjct: 256 DRVFAGLAAVIVIGLLIEHLVF 277



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 87/294 (29%), Gaps = 12/294 (4%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
              L  +         PL   V +    LG   F              ++ +L   W   
Sbjct: 5   ATLLPPVREEYERPLEPLGELVLEAPLPLGKRIF-----AQGWVRKTLIALVLIGIWEIA 59

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
              +   +   + G   + F        ++    ++M  ++   ++ + +   +      
Sbjct: 60  ARAIDNDLLLPTFGATFSAFVQGVWSGELLQKTAVSMSVLLRGYLLGAALAFVLTSLAVS 119

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  +     +    P+    PL +        +    L  +++    W +  N  +
Sbjct: 120 TRLGRDVLSMLTAMFNPLPSIALLPLALLWFGLGTGS----LLFVLVHSVLWPLALNTYS 175

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  + P   +    ++ +TG R    I++P   P  + G       AW   I +E+    
Sbjct: 176 GFQSVPATLRMTGRNYGLTGIRHVLLILVPAALPAILAGLRVGWAFAWRTLIAAELVFGA 235

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                    G YI ++  +     V  G+  +    L +   ++  L     R 
Sbjct: 236 SSGSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLIEHLVFDTLERVTVRR 287


>gi|269959816|ref|ZP_06174194.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835429|gb|EEZ89510.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 266

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L   
Sbjct: 32  AVILGLWQLVVVIFDMPSFILPSPIEVLDRLVTRYDVLLKHTWVTAQEILLGLALGLSMG 91

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F + 
Sbjct: 92  LLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVT 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++   
Sbjct: 152 TCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV--- 200

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   L 
Sbjct: 201 ---VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL 257

Query: 261 RPMIVWSNK 269
           +  I W +K
Sbjct: 258 KKAIPWESK 266



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAV 244

Query: 565 FVLAL 569
             ++L
Sbjct: 245 LSISL 249


>gi|295680673|ref|YP_003609247.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295440568|gb|ADG19736.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 347

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 10/201 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+  +      +   +    +  ++    +G+ IG+   +   + P  +L+   PA  + 
Sbjct: 142 DLPRLASSVGHSFVLLAYGYVCGALTGFVIGVSIGWSKAVGYWLHPVLRLVGPLPATAWL 201

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL                  L+     + +     +G ++  + + +VA +         
Sbjct: 202 PLAFFFFPSSFS----ASVFLIALAAAFPVAVLTWSGVASVSSAYYDVARTLGARPSFLI 257

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G     G ++   IV+E+           GLG Y+  +    ++  
Sbjct: 258 LRVAIPAALPSVFVGLFMGLGASFAVLIVAEMMG------VKAGLGWYLQWAQGWAAYSN 311

Query: 555 VVLGVLIMCCFVLALNRFLWH 575
           +   +L+M      L   L+ 
Sbjct: 312 MYAALLVMALMCSGLVTLLFR 332



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 90/243 (37%), Gaps = 17/243 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVI 78
           LLA  + +    ++   ++    P        + +    LP+ A     + + +    V 
Sbjct: 104 LLALSIGLTAWEVVTAQLEWLPRPFFAPPQALLAVYADDLPRLASSVGHSFVLLAYGYVC 163

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  FV       S+ +G  L P+L ++  +P   +L     +F + +   V    LAA
Sbjct: 164 GALTGFVIGVSIGWSKAVGYWLHPVLRLVGPLPATAWLPLAFFFFPSSFSASVFLIALAA 223

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +            +  + ++     +V+R+           + +P ++P +   + M
Sbjct: 224 AFPVAVL--------TWSGVASVSSAYYDVARTLGARPSFLILRVAIPAALPSVFVGLFM 275

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  ++ +EM+ V        G+G Y+  A        +  A+L M  +      L
Sbjct: 276 GLGASFAVLIVAEMMGVKA------GLGWYLQWAQGWAAYSNMYAALLVMALMCSGLVTL 329

Query: 259 LFR 261
           LFR
Sbjct: 330 LFR 332


>gi|269964845|ref|ZP_06179082.1| ABC transporter permease protein [Vibrio alginolyticus 40B]
 gi|269830505|gb|EEZ84727.1| ABC transporter permease protein [Vibrio alginolyticus 40B]
          Length = 266

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L   
Sbjct: 32  AVILGLWQLVVVIFDMPNFILPSPIEVLDRLVTRYDVLLKHTWVTAQEILLGLALGLSMG 91

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F + 
Sbjct: 92  LLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVT 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++   
Sbjct: 152 TCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV--- 200

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   L 
Sbjct: 201 ---VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL 257

Query: 261 RPMIVWSNK 269
           +  I W +K
Sbjct: 258 KKAIPWESK 266



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAV 244

Query: 565 FVLAL 569
             ++L
Sbjct: 245 LSISL 249


>gi|206562414|ref|YP_002233177.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198038454|emb|CAR54412.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 259

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 80/213 (37%), Gaps = 16/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R    +   + F   +    A+S     +  P    ++ +P+LG +  
Sbjct: 58  GELATDLGASLRRTTLGLGFGVAFGLAFGAAMARSSLARKLGEPAFQALRYVPLLGLIPL 117

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++            E A +F I  +  + MT + +  L  +     E+++S+RL+   
Sbjct: 118 LSLWAGTG--------EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIG 169

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P ++P L   ++ ++   W    +SE++          G+GS +  A      
Sbjct: 170 LWRDVLIPGALPDLFAGVLQAVPFAWITATSSELLFNTGA-----GVGSLMQNAQAGARA 224

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             +L  +L +  +        + + R  + W +
Sbjct: 225 DVLLVCVLGVTALAVGMSASCERIARRALRWRD 257



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 9/186 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R  + +       +  G  +          +P  Q L   P     PL+      
Sbjct: 65  GASLRRTTLGLGFGVAFGLAFGAAMARSSLARKLGEPAFQALRYVPLLGLIPLLSLWAGT 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++     + +      G       + E+A S+ +T    WR +++PG  
Sbjct: 125 G----EFAKVFIIALAAFYPMTTASFDGLRRVDPRYVELAQSYRLTRIGLWRDVLIPGAL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G + A   AW  +  SE+           G+G+ +  +        +++ VL + 
Sbjct: 181 PDLFAGVLQAVPFAWITATSSELL-----FNTGAGVGSLMQNAQAGARADVLLVCVLGVT 235

Query: 564 CFVLAL 569
              + +
Sbjct: 236 ALAVGM 241


>gi|329912728|ref|ZP_08275795.1| Hydroxymethylpyrimidine ABC transporter, transmembrane component
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545558|gb|EGF30738.1| Hydroxymethylpyrimidine ABC transporter, transmembrane component
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 257

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 69/226 (30%), Gaps = 10/226 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  +    ++          +     +    +      T +  +    IA  + + +G  
Sbjct: 24  WQAICSVFSVSEFIFPSPLAIGQAMVEYAGPIAGHAWRTYWVTMAGFGIAVAVGVLLGFS 83

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG    + S   P      A P   F P++V               L       + I+ N
Sbjct: 84  IGSSAFLYSAAYPLMTAFNALPKAAFVPILVVWFGIGAG----PAILTAFLIAFFPIMVN 139

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G +    + ++V              + LP   PY+      A   A+  S VSE+ 
Sbjct: 140 IATGLATMEPEMEDVLRVLGARRIDVLLKVGLPRSMPYFFASLKVAITLAFVGSTVSEM- 198

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +    G+G  +  +      P    G++++    +A+    
Sbjct: 199 -----NASNEGIGYLLVSAGSSMKMPLAFAGLVVIGAMAMAMYELF 239



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 82/237 (34%), Gaps = 17/237 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +  + E   P  +     +      +  +A RT    ++   I++    +       S  
Sbjct: 30  VFSVSEFIFPSPLAIGQAMVEYAGPIAGHAWRTYWVTMAGFGIAVAVGVLLGFSIGSSAF 89

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L     P++    ++P   F+   VV+F              AI   F    + +  ++ 
Sbjct: 90  LYSAAYPLMTAFNALPKAAFVPILVVWFGIGAGP--------AILTAFLIAFFPIMVNIA 141

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L  +  ++E+V R            +G+P SMP    ++ ++++  +     SEM   
Sbjct: 142 TGLATMEPEMEDVLRVLGARRIDVLLKVGLPRSMPYFFASLKVAITLAFVGSTVSEMNAS 201

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            +      GIG  +  A     +      ++ +  +     +L   + R    W+++
Sbjct: 202 NE------GIGYLLVSAGSSMKMPLAFAGLVVIGAMAMAMYELFAVIERRTTGWAHR 252


>gi|289551422|ref|YP_003472326.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus lugdunensis HKU09-01]
 gi|289180953|gb|ADC88198.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus lugdunensis HKU09-01]
          Length = 504

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 76/191 (39%), Gaps = 26/191 (13%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                +  K++R+  +++ I  ++Q+IP L  L   +  F            + AI A+ 
Sbjct: 38  VPLGIVLTKAKRISEIVMNIAAVLQTIPSLALLGLMIPLFGIG--------RVPAIIALV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  +  +   L E ++   +  +++   + +P +MP ++  +  +M   
Sbjct: 90  VYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGIRTAM--- 146

Query: 204 WFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                   ++++G   +    IG+      I L I   +   IL   +    +  ++D +
Sbjct: 147 --------VLIIGTATLAAL-IGAGGLGDLILLGIDRNNPSLILIGAIPAALLAIIFDVI 197

Query: 259 LFRPMIVWSNK 269
           L R M   S K
Sbjct: 198 L-RLMAKLSYK 207



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 12/186 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI +     IS  +   A +L   P+     L++       +   + L +  +    
Sbjct: 38  VPLGIVLTKAKRISEIVMNIAAVLQTIPSLALLGLMIPLFGIGRVPAIIALVVYALL--- 94

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N   G         E A    +  +R    + LP   P  + G  TA       +
Sbjct: 95  -PILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGIRTAMVLIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++ +   G +               ++ +   +++G +      +  +  L   +    
Sbjct: 154 TLAALIGAGGLGDLIL-------LGIDRNNPSLILIGAIPAALLAIIFDVIL-RLMAKLS 205

Query: 582 TRCLRL 587
            + L L
Sbjct: 206 YKKLML 211


>gi|261868165|ref|YP_003256087.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|293391893|ref|ZP_06636227.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|261413497|gb|ACX82868.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|290952427|gb|EFE02546.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 503

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 11/145 (7%)

Query: 58  VHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             +LP+            LSA++I+++     A L ++ R +  +++   +++Q+IP L 
Sbjct: 6   PFTLPEVGAMLLTHLWLSLSALLIAVVIAVPIAVLLSRKRHMAEIVLQFTNVLQTIPSLA 65

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   + +     P  +I   L A+  IF         + Y  L  I + +++   +F L
Sbjct: 66  LLGLLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLSQIDQSIQDAYTAFGL 117

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMS 199
           S WQ  W + +P ++P ++  +  +
Sbjct: 118 SRWQSLWRIELPMALPAMMSGIRTA 142



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 75/198 (37%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  V  +    ++  +  ++IA +I +P+ + +  + H++  +  F  +L   P+     
Sbjct: 9   LPEVGAMLLTHLWLSLSALLIAVVIAVPIAVLLSRKRHMAEIVLQFTNVLQTIPSLALLG 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  V        + L+L  +      I  N   G S      ++  ++F ++ W+   
Sbjct: 69  LLIPFVGIGSPPVLIALTLYALL----PIFQNTYLGLSQIDQSIQDAYTAFGLSRWQSLW 124

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I LP   P  ++G  TA       + ++ +   G +               ++ +   +
Sbjct: 125 RIELPMALPAMMSGIRTAAVLIIGTATLAALIGAGGLGSLIL-------LGIDRNNMVMI 177

Query: 556 VLGVLIMCCFVLALNRFL 573
             G L+     + ++  +
Sbjct: 178 FTGALLSALLAVGVSGLI 195


>gi|323351745|ref|ZP_08087399.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|322122231|gb|EFX93957.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
          Length = 506

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|163760515|ref|ZP_02167596.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
 gi|162282130|gb|EDQ32420.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
          Length = 273

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+   +  A++  + VG+ +GF P++ S + PF   ++  P     P++   V    
Sbjct: 78  SLIRLAAGMGAATLFALIVGVLVGFLPYVRSTLSPFIASISLIPPITILPILFIMVGLGE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      LL+  GT   +  +V       P +    A +   + W+    ++LP + P 
Sbjct: 138 TSK----ILLIALGTAPVMTRSVAQAVMDLPKELIIKAQTLGASTWQMMTRVVLPQVLPN 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +T        AW   I +E  +       T+GLG  I       +   ++  VL +   
Sbjct: 194 LITAMRLGLVPAWIFLISAEAIA------STSGLGYRIFLVRRFLAMDVILPYVLWITFL 247

Query: 566 VLALNRFL 573
              ++R L
Sbjct: 248 AYLIDRLL 255



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 14/200 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+ + M  + LF  +   L      +   L P +  +  IP +  L    
Sbjct: 71  LWGDTIDSLIRLAAGMGAATLFALIVGVLVGFLPYVRSTLSPFIASISLIPPITILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       MT S+ Q++ ++P++L   +++   S WQ  
Sbjct: 131 IMVGLG--------ETSKILLIALGTAPVMTRSVAQAVMDLPKELIIKAQTLGASTWQMM 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  M + +   W F++++E I          G+G  I L  +   +  
Sbjct: 183 TRVVLPQVLPNLITAMRLGLVPAWIFLISAEAIA------STSGLGYRIFLVRRFLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           IL  +L +  + +L D+LL 
Sbjct: 237 ILPYVLWITFLAYLIDRLLL 256


>gi|111018598|ref|YP_701570.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110818128|gb|ABG93412.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 273

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 14/201 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           ++  +AS T    L    +SLLF +  A L   S  L    VP+  + Q++PI+      
Sbjct: 69  AISGHASATLQVTLIGFAVSLLFAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLM 128

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F            L  I  I  +  + MT  + +      R+   + RS   S WQ+
Sbjct: 129 IIWFGFGL--------LPKILVIALATFFPMTIGLIEGFAAADREAGALLRSMGASRWQE 180

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F Y+ +P ++P     + + ++      V +E +          G+G Y+A         
Sbjct: 181 FRYVRLPSAIPRFFTALRIGITYAVVGAVFAEYVG------ATSGLGIYMATQKNSFRTD 234

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            +L A+L    +      L F
Sbjct: 235 LVLAAVLVTAVISVSLYLLTF 255



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+   ++   ++ +    + + + F P +     P   +    P     PL++    
Sbjct: 74  ASATLQVTLIGFAVSLLFAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L       L++   T + +   +I G +A   +   +  S   + W+ +RY+ LP  
Sbjct: 134 FGLL----PKILVIALATFFPMTIGLIEGFAAADREAGALLRSMGASRWQEFRYVRLPSA 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P + T        A   ++ +E          T+GLG Y+A          V+  VL+ 
Sbjct: 190 IPRFFTALRIGITYAVVGAVFAEYVG------ATSGLGIYMATQKNSFRTDLVLAAVLVT 243

Query: 563 CCFVLAL 569
               ++L
Sbjct: 244 AVISVSL 250


>gi|304404419|ref|ZP_07386080.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304346226|gb|EFM12059.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 287

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 90/248 (36%), Gaps = 26/248 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------------HSLPQYASRTTLR 71
           A  +V  ++ IL  G+ E       +D +  +                ++  +   T   
Sbjct: 40  AVFVVRTVLLILFIGLWEAAGRNKWIDPLLFSFPSRIMNLLGDMVRDGTIWSHVGMTVGE 99

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +   ++      + A L      +  VL P L ++ S+P +      +V     +    
Sbjct: 100 TIGGFILGTALGTLIAALLWLFPFVSRVLDPYLVVLNSMPKVALGPIFIVVLGPGF---- 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L+ +    +  V   T ++Y     +     +V R F  S  + FWY+ VP S P 
Sbjct: 156 ----LSIVVTTLSVTVIITTLNIYNQFREVEEGYIKVVRLFGASRLRTFWYVIVPASFPV 211

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++   W  V+  E +V         G+G  I    +  +   +L ++  +  V
Sbjct: 212 IISTLKVNVGLSWVGVIVGEFLV------AKLGLGYLIIYGFQVFNFTLVLASLFVIAIV 265

Query: 252 IFLYDQLL 259
             +  QL+
Sbjct: 266 ATIMYQLV 273



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   +   I+ + +   +   +   P +S  + P+  +L + P     P+ +  +  
Sbjct: 94  GMTVGETIGGFILGTALGTLIAALLWLFPFVSRVLDPYLVVLNSMPKVALGPIFIVVLGP 153

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+  +    + +  T      N+          + +V   F  +  R + Y+I+P  F
Sbjct: 154 GFLSIVVTTLSVTVIIT----TLNIYNQFREVEEGYIKVVRLFGASRLRTFWYVIVPASF 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++      G +W   IV E        +   GLG  I    +  +F  V+  + ++ 
Sbjct: 210 PVIISTLKVNVGLSWVGVIVGEFL------VAKLGLGYLIIYGFQVFNFTLVLASLFVIA 263

Query: 564 CFVLALNRFL 573
                + + +
Sbjct: 264 IVATIMYQLV 273


>gi|182436787|ref|YP_001824506.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465303|dbj|BAG19823.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 296

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R++V         +  G+ +G  P +   ++P    L   P   +F L++     
Sbjct: 103 GISLRRILVGAGAGVAAGLVTGVLMGTLPWVRVVLEPAVAFLRTLPPLAYFSLLIIWFGI 162

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   L++         +     +  ++ P    E A +      +    ++LP   
Sbjct: 163 DEAPKLWLLAI----AAMPPVAVATASAVASAPTALVEAARAIGARRGQVVTSVVLPSAL 218

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A G A+++ + +E  +         G+G  I ++        VVLG+  + 
Sbjct: 219 PEILVGVRLAFGIAYSSVVAAETVNG------LPGIGGLIRDAQRYNQSDTVVLGLFAIG 272

Query: 564 CFVLALN---RFLWHPLYLY 580
              L ++   R L   L  +
Sbjct: 273 LSGLLIDAALRLLSDRLAPW 292



 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 85/211 (40%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L ++   +  R+L      +    V   L      + +VL P +  ++++P L + + 
Sbjct: 96  HTLIEHLGISLRRILVGAGAGVAAGLVTGVLMGTLPWVRVVLEPAVAFLRTLPPLAYFSL 155

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E   ++ +  + +  +  +   ++ + P  L E +R+      Q
Sbjct: 156 LIIWFGID--------EAPKLWLLAIAAMPPVAVATASAVASAPTALVEAARAIGARRGQ 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + ++    +  VVA+E +        LPGIG  I  A +    
Sbjct: 208 VVTSVVLPSALPEILVGVRLAFGIAYSSVVAAETV------NGLPGIGGLIRDAQRYNQS 261

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  +  +     L D   +LL   +  W
Sbjct: 262 DTVVLGLFAIGLSGLLIDAALRLLSDRLAPW 292


>gi|284035250|ref|YP_003385180.1| binding-protein-dependent transporters inner membrane component
           [Spirosoma linguale DSM 74]
 gi|283814543|gb|ADB36381.1| binding-protein-dependent transport systems inner membrane
           component [Spirosoma linguale DSM 74]
          Length = 519

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +           +++++LL         A+  RL   ++ +  ++Q++P +  L F +
Sbjct: 15  LLEQTLTHIGLTFVSLLLALLIGVPLGIFIARKTRLANGVLGVAGVLQTVPSVALLGFLI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                            A+ A+F   +  +  + +  +  +   ++E +R   ++  Q  
Sbjct: 75  PLLGIGVGP--------ALVALFLYALLPIIRNTFVGITEVSPLIKEAARGVGMTENQIL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P +   +  +        V +  +      +   G+G +I   I   ++  
Sbjct: 127 TKVELPLALPVIFAGVRTA-------TVINVGVATLAAYVAAGGLGEFIFSGIALSNVNM 179

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L   +    +   +D  L R
Sbjct: 180 MLSGAIPAALLAIGFDFGLAR 200



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 12/197 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V +++A +I +P+GI+I  +  +++ +   A +L   P+      ++  +    + P L
Sbjct: 27  FVSLLLALLIGVPLGIFIARKTRLANGVLGVAGVLQTVPSVALLGFLIPLLGIG-VGPAL 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L        I+ N   G +      KE A    +T  +    + LP   P    G 
Sbjct: 86  VALFLY---ALLPIIRNTFVGITEVSPLIKEAARGVGMTENQILTKVELPLALPVIFAGV 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++   + G       GLG +I       +   ++ G +      +  +
Sbjct: 143 RTATVINVGVATLAAYVAAG-------GLGEFIFSGIALSNVNMMLSGAIPAALLAIGFD 195

Query: 571 RFLWHPLYLYGTRCLRL 587
            F    L     + LR+
Sbjct: 196 -FGLARLQHLSGKKLRV 211


>gi|297620815|ref|YP_003708952.1| putative transporter/thiamine biosynthesis protein [Waddlia
           chondrophila WSU 86-1044]
 gi|297376116|gb|ADI37946.1| putative transporter/thiamine biosynthesis protein [Waddlia
           chondrophila WSU 86-1044]
          Length = 539

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 23/236 (9%)

Query: 29  IGIINILLHGIQETTVPRDIV--DIVPITLDVHSLPQYASR-------TTLRMLSAMVIS 79
           I +I +   G +   +  D++   + P +  ++SL  Y  R       T   M     ++
Sbjct: 11  IALICLFWLGWEWMCLTSDLLQFSLPPPSKIINSLWTYRGRFLFHTISTFKEMAGGFALA 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +  F  A L A+ + +  VL P+    Q IP+       V++F          + LA I
Sbjct: 71  SVCAFPLAWLMARWKVMRAVLQPLFIFTQCIPMFALAPLMVLWF--------DWSYLAVI 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
                   + +T ++Y+ L + P+ L +  R    +  Q FW L  P+++P +   + +S
Sbjct: 123 VPTALMIFFPLTMNLYRGLVSTPQHLLDFFRLHEATSMQIFWKLRFPWAVPYMWAGLRIS 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +      VA E            G+G  +  + +  ++  +  A+  +  + F  
Sbjct: 183 AAVAGIGAVAGE------WAGAQSGLGILMLESRRAAEIDVMFGALFCLSAMSFAL 232



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 21/232 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFT-----------YQDVLYVIWLGCITMFRVVVLIIIA 397
             ++C   +G  W  +   +  F+           +      ++    T   +     +A
Sbjct: 11  IALICLFWLGWEWMCLTSDLLQFSLPPPSKIINSLWTYRGRFLFHTISTFKEMAGGFALA 70

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           S+   P+   +     + + +QP        P     PL+V    + +L   +  +L++ 
Sbjct: 71  SVCAFPLAWLMARWKVMRAVLQPLFIFTQCIPMFALAPLMVLWFDWSYLAVIVPTALMIF 130

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           F     +  N+  G  + P    +       T  + +  +  P   PY   G   +   A
Sbjct: 131 F----PLTMNLYRGLVSTPQHLLDFFRLHEATSMQIFWKLRFPWAVPYMWAGLRISAAVA 186

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              ++  E A         +GLG  + ES        +   +  +     AL
Sbjct: 187 GIGAVAGEWAG------AQSGLGILMLESRRAAEIDVMFGALFCLSAMSFAL 232


>gi|295680512|ref|YP_003609086.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295440407|gb|ADG19575.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 277

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 90/238 (37%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  + V  + + L    +     P  ++           L      +  R    ++I   
Sbjct: 39  VLLIAVWQLASSLGVASEFVLPSPASVLAAYRELWQSGDLQDALKVSLARAALGLLIGGG 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    +  S+        +L ++++IP +  +   VV+F           E++ +  
Sbjct: 99  AGMLLGVASGLSKSAERGFDSVLQMLRTIPFIALVPIFVVWFGIG--------EVSKVAL 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +  M  S Y ++  I   L E+ R+FRL+   +   + +P S+PG++  +  + +
Sbjct: 151 IVGAAISPMYLSTYHAIRGIDPKLLELGRTFRLTRAHQVRLIILPMSLPGILVGVRYAAA 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +VA+E I          GIG  +  A + Q    I+  +L    +    D LL
Sbjct: 211 ISLLALVAAEQINASA------GIGYILNNANQFQRTDIIIAGILVYAALGISVDALL 262



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 76/236 (32%), Gaps = 12/236 (5%)

Query: 340 VSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           V  +L   W     +   +  +       +  +        +     +++ R  + ++I 
Sbjct: 37  VPVLLIAVWQLASSLGVASEFVLPSPASVLAAYRELWQSGDLQDALKVSLARAALGLLIG 96

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
               + +G+  G             Q+L   P     P+ V       ++       L++
Sbjct: 97  GGAGMLLGVASGLSKSAERGFDSVLQMLRTIPFIALVPIFVVWFGIGEVSK----VALIV 152

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +  +             E+  +F +T     R IILP   P  + G   A   +
Sbjct: 153 GAAISPMYLSTYHAIRGIDPKLLELGRTFRLTRAHQVRLIILPMSLPGILVGVRYAAAIS 212

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             A + +E  +       + G+G  +  + +      ++ G+L+     ++++  L
Sbjct: 213 LLALVAAEQIN------ASAGIGYILNNANQFQRTDIIIAGILVYAALGISVDALL 262


>gi|229541672|ref|ZP_04430732.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229326092|gb|EEN91767.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 262

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 89/244 (36%), Gaps = 14/244 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
                  N  ++    IF   V  GV  G              +Q++  + W+    +++
Sbjct: 7   KRRSRFVNTALTAAWLIFLLFVWQGVTAGFHISEWMLPKPTEVWQELKSLQWMVWPNIWQ 66

Query: 390 ----VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
               V++ +  + +I   + +++   P     ++P   +    P     PL++    +  
Sbjct: 67  TAKEVLIGLAFSIVIGAAIAVFMDMVPVFRMLVRPLLVVSQTIPIVAIAPLLIVWFGFGL 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +++I    + +  +++ G     +D  ++  + H + W+ +R +  P + PY
Sbjct: 127 QSK----IIVVILICFFPLALSILEGFQTVDDDLVKLLKTMHASKWQLYRKVKFPAVLPY 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      +     ++   
Sbjct: 183 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFMTARLFAISAVIIGL 236

Query: 566 VLAL 569
              L
Sbjct: 237 TFLL 240



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F+L +         I E  +P+       +      +     +T   +L  +  S++
Sbjct: 21  WLIFLLFVWQGVTAGFHISEWMLPKPTEVWQELKSLQWMVWPNIWQTAKEVLIGLAFSIV 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A          M++ P+L + Q+IPI+      +V+F      K        I  
Sbjct: 81  IGAAIAVFMDMVPVFRMLVRPLLVVSQTIPIVAIAPLLIVWFGFGLQSK--------IIV 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  S+ +    +  DL ++ ++   S WQ +  +  P  +P     + ++++
Sbjct: 133 VILICFFPLALSILEGFQTVDDDLVKLLKTMHASKWQLYRKVKFPAVLPYFFSGLKIAVT 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 +  E +   +      G+G  +  A K      +      ++G+ FL 
Sbjct: 193 YSVMGAIIGEWLGASE------GLGVMLTRATKSFMTARLFAISAVIIGLTFLL 240


>gi|114763250|ref|ZP_01442674.1| putative ABC transporter protein [Pelagibaca bermudensis HTCC2601]
 gi|114544048|gb|EAU47058.1| putative ABC transporter protein [Roseovarius sp. HTCC2601]
          Length = 267

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 96/252 (38%), Gaps = 14/252 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             L   VL+  +   L    Q    P D+++     L    L  +  RT  R+  A V++
Sbjct: 29  ISLCGLVLLWVLAATLTDDAQVLPQPWDLIEPFVQALSSGELLFHLGRTLGRVAWAFVLA 88

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +           +   L   L P L I  ++P L  +    ++            E AAI
Sbjct: 89  MSLGIALGLAMGRLPALDRWLDPWLVIFLNLPALVLIVLCYLWIGL--------TETAAI 140

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+  +++ N+   + +    +   L++++  +R+    +  ++ +P   P +       
Sbjct: 141 AAVTLNKIPNVATVIREGARALDPGLDDMAGVYRMPWATRMRHVVLPQLAPFVTAAARSG 200

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++  W  V+  E +   +      G+G  I L  +  D+  +L    + + V+   + L+
Sbjct: 201 VAVIWKIVLVVEFLGRSN------GVGFQIHLYFQLFDVAMVLVYAFSFIAVMLAVEWLV 254

Query: 260 FRPMIVWSNKFR 271
            +P      ++R
Sbjct: 255 LQPWERRVRRWR 266



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 78/241 (32%), Gaps = 10/241 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ ++           +  Q    I           +++    T+ RV    ++A  + I
Sbjct: 34  LVLLWVLAATLTDDAQVLPQPWDLIEPFVQALSSGELLFHLGRTLGRVAWAFVLAMSLGI 93

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G  P +   + P+  +    PA V   L    +              +      
Sbjct: 94  ALGLAMGRLPALDRWLDPWLVIFLNLPALVLIVLCYLWIGLTET----AAIAAVTLNKIP 149

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  GA A      ++A  + +      R+++LP + P+    A +     W   +
Sbjct: 150 NVATVIREGARALDPGLDDMAGVYRMPWATRMRHVVLPQLAPFVTAAARSGVAVIWKIVL 209

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
           V E         R+ G+G  I    +      V++        +LA+   +  P      
Sbjct: 210 VVEFLG------RSNGVGFQIHLYFQLFDVAMVLVYAFSFIAVMLAVEWLVLQPWERRVR 263

Query: 583 R 583
           R
Sbjct: 264 R 264


>gi|16306464|gb|AAL17617.1|AF432069_2 BilEB [Listeria monocytogenes]
          Length = 504

 Score = 90.4 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|266622575|ref|ZP_06115510.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288865701|gb|EFC97999.1| taurine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 267

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 10/172 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M  V++  I+  +  +P+   + +   +   ++P+ Q +   P   + PLVV       
Sbjct: 74  SMISVILGFILGFVTAVPIAFLMAWYRPVRYIVEPWIQFIRNIPPLAYVPLVVIAAGVGR 133

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +++   T   +   +  G         + A          +  +I P   P+
Sbjct: 134 KPQ----VIVIWMATFLIMCVTIYQGVRNVDETLIKAARVLGAKDRDIFVKVIFPATTPF 189

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +T        A    I +E            GLG  I         P ++L
Sbjct: 190 IITAVRLGVSVALTTLIAAE------STGAVAGLGMRIRSLNNSFDVPPMLL 235



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 84/229 (36%), Gaps = 19/229 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +  L    ++ I       +  +T        ++V  +   ++   L    S + + ++ 
Sbjct: 21  WGWLLISFMVAIALWFWLSVNPSTARSFPFLPEVVKSLKTMIERGVLWNDFSSSMISVIL 80

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             ++  +     A L A  R +  ++ P +  +++IP L ++   V+             
Sbjct: 81  GFILGFVTAVPIAFLMAWYRPVRYIVEPWIQFIRNIPPLAYVPLVVIAAGVG-------- 132

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +  I+ +    M  ++YQ + N+   L + +R         F  +  P + P ++ 
Sbjct: 133 RKPQVIVIWMATFLIMCVTIYQGVRNVDETLIKAARVLGAKDRDIFVKVIFPATTPFIIT 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            + + +S     ++A+E      +   + G+G  I       D+  +L 
Sbjct: 193 AVRLGVSVALTTLIAAE------STGAVAGLGMRIRSLNNSFDVPPMLL 235


>gi|218673738|ref|ZP_03523407.1| amino acid ABC transporter permease [Rhizobium etli GR56]
          Length = 570

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 99/279 (35%), Gaps = 25/279 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGI----INILLHGIQETTVPRDIVDIV----PITLDV 58
           L     R      + +   V VIG+     N+        + P  +++ +          
Sbjct: 305 LKAMHRRNTLVRFWQIAILVFVIGMWELASNMQWIDPFFYSSPSGVLERLYEWATEGTTE 364

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 365 GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 424

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 425 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 476

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 477 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 530

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V  + +    L+   +  W  + +L+ 
Sbjct: 531 AGMFAAILLVMVVTLVAEYIMTLIENRLAKWRPQQQLDT 569



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 373 VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 432

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + L+ +M+F   + +  N   G      +    A     + W+  R +++P    
Sbjct: 433 -LPSKVALAFIMVF---FVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 488

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 489 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 542

Query: 565 FVLALNRFL---------WHP 576
             L     +         W P
Sbjct: 543 VTLVAEYIMTLIENRLAKWRP 563


>gi|296186487|ref|ZP_06854890.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|296048934|gb|EFG88365.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 239

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 103/237 (43%), Gaps = 14/237 (5%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           IG+  + +        P D++  +      ++L      +  R++   ++S++       
Sbjct: 5   IGVDVLSIWKPYTFPSPVDVIKSLYFLSIDNTLLIAVGASMERLMIGYLLSVIIGIPLGI 64

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + + +G  +  I+  +Q++P + +L F ++++          +E   IF I    ++
Sbjct: 65  LIVRYKYVGENIKSIILGLQTLPSICWLPFAILWYGL--------SEKTIIFVIAMGSIF 116

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            ++ +   ++ N+     + +++    G++ +  + +P S+P ++  +    S  W  ++
Sbjct: 117 AISIATEGAINNVYPLYIKAAKTMGAKGFKLYLNVVMPASLPSIIAGLKQGWSFAWRALM 176

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           A EM+V         G+G  + +     D+  +L  M+ ++ +  L D ++F  +  
Sbjct: 177 AGEMLV------ATKGLGQVLMIGRDLADISQVLAVMIVIIAIGLLLDNVVFGRIEA 227



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 80/209 (38%), Gaps = 10/209 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     +M R+++  +++ II IP+GI I    ++   I+     L   P+  + P  +
Sbjct: 37  LLIAVGASMERLMIGYLLSVIIGIPLGILIVRYKYVGENIKSIILGLQTLPSICWLPFAI 96

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  ++  G+ + I        +     + + A +    G++ +  ++
Sbjct: 97  LWYGLSEKT----IIFVIAMGSIFAISIATEGAINNVYPLYIKAAKTMGAKGFKLYLNVV 152

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G       AW A +  E+       + T GLG  +    +     +V+  
Sbjct: 153 MPASLPSIIAGLKQGWSFAWRALMAGEML------VATKGLGQVLMIGRDLADISQVLAV 206

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++    L L+  ++  +     +   L
Sbjct: 207 MIVIIAIGLLLDNVVFGRIEASIRQKWGL 235


>gi|114778546|ref|ZP_01453373.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1]
 gi|114551135|gb|EAU53695.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1]
          Length = 262

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 76/187 (40%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + ++++I   VG+  G  P++ + + PF ++L+  P     P++      
Sbjct: 65  ASSLSRLAMGVGVSAVIGFFVGVACGVVPYVRANLSPFVRVLSMVPPIALLPILFIVFGL 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G   +I  +V       P++    A +   + W+    +++P + 
Sbjct: 125 GEVSK----VVLIVLGIAPFIARDVQQRVEELPHEQMIKAQTLGASTWQIIIRVVIPQVM 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +       T GLG  I           ++  V+ + 
Sbjct: 181 PRLLNAVRLSLGPAWLFLIAAEAIA------STDGLGYRIFLVRRYLDMETILPYVVWIT 234

Query: 564 CFVLALN 570
                ++
Sbjct: 235 LLAYLMD 241



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 77/196 (39%), Gaps = 14/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + +  R+   + +S +  F           +   L P + ++  +P +  L    
Sbjct: 60  LWVDTASSLSRLAMGVGVSAVIGFFVGVACGVVPYVRANLSPFVRVLSMVPPIALLPILF 119

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E++ +  I       +   + Q +  +P +    +++   S WQ  
Sbjct: 120 IVFGLG--------EVSKVVLIVLGIAPFIARDVQQRVEELPHEQMIKAQTLGASTWQII 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  MP L+  + +S+   W F++A+E I   D      G+G  I L  +  D+  
Sbjct: 172 IRVVIPQVMPRLLNAVRLSLGPAWLFLIAAEAIASTD------GLGYRIFLVRRYLDMET 225

Query: 241 ILYAMLTMLGVIFLYD 256
           IL  ++ +  + +L D
Sbjct: 226 ILPYVVWITLLAYLMD 241


>gi|15891015|ref|NP_356687.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15159340|gb|AAK89472.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 283

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 22/257 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            + ++L    +  ++P  F L+A   ++    I L     T +                L
Sbjct: 35  LIESVLGAIEAVLLYPPAFALIAIATLLAFFAINLKAAIVTMLALAFCFF-------AGL 87

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              + +T   +  A++IS+   F    LA++++R    L P+LDIMQ++P   +L   V+
Sbjct: 88  WTQSMQTLALVTVAVIISVSIAFPLGILASRNKRFETALRPLLDIMQTVPPWVYLIPAVM 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F            + AI A     V  M      +   +P+DL E+ ++   S      
Sbjct: 148 IFSLG--------RVPAIIATIVYGVPPMLRLTTLAFNQVPKDLLELGQASGASPRAILL 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P L+  +          ++ S  +VV   ++   G+G+ +   +   ++   
Sbjct: 200 KIEIPSATPTLLVGLNQ-------CILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEMGPG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A L ++ +  L D+L
Sbjct: 253 LRAGLAIVAIAILLDRL 269



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 9/173 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397
           +L       +  +A  +A+ +I       T   + +  + G       T+  V V +II+
Sbjct: 46  VLLYPPAFALIAIATLLAFFAINLKAAIVTMLALAFCFFAGLWTQSMQTLALVTVAVIIS 105

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             I  P+GI         + ++P   ++   P  V+    V   S       +   +  I
Sbjct: 106 VSIAFPLGILASRNKRFETALRPLLDIMQTVPPWVYLIPAVMIFSLGR----VPAIIATI 161

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                 +L       +  P D  E+  +   +       I +P   P  + G 
Sbjct: 162 VYGVPPMLRLTTLAFNQVPKDLLELGQASGASPRAILLKIEIPSATPTLLVGL 214


>gi|328946046|gb|EGG40192.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1087]
          Length = 506

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 81/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      +++   ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKVANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++     +++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKVANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|299067251|emb|CBJ38448.1| putative ABC-type transport system, permease component [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFGIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASRRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
              L L+      L     + L
Sbjct: 234 VCALVLD-----WLVGLAEKRL 250



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFGIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASRRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             ++ +     + D L+    + ++ W  K
Sbjct: 227 AGIVVLTVCALVLDWLVGLAEKRLMRWQPK 256


>gi|154251347|ref|YP_001412171.1| binding-protein-dependent transport systems inner membrane
           component [Parvibaculum lavamentivorans DS-1]
 gi|154155297|gb|ABS62514.1| binding-protein-dependent transport systems inner membrane
           component [Parvibaculum lavamentivorans DS-1]
          Length = 268

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 5/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L++     V       W  +V    I          +      +   ++    +T+ 
Sbjct: 9   ARSLRIVVPVAVGIAFLCLWEVLVRVNGIQPFVLPAPSRIAESLAANFGSLMGSLWVTLR 68

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   ++A++  + + +      HI   + P+A +L   P     PL++  V Y   N 
Sbjct: 69  VTIAAFLLAAVGGVGLAVLFSQSRHIEMALFPYAIVLQVTPVVSIAPLILIWVGY--DNV 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              L +L      + IL N   G  +  ++ +++   +  + W+    + LP   PY + 
Sbjct: 127 EFALLILAWIVAFFPILSNTTLGLRSADHNLRDLFRLYGASRWQVLMELQLPSALPYILA 186

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G A   ++V+E  +        TGL   I E+  +   P +   + ++    + 
Sbjct: 187 GLKISGGLALIGAVVAEFVAGSG---AATGLAWRIVEAGNRLDIPRMFAALFLLSTLGIC 243

Query: 569 L 569
           +
Sbjct: 244 I 244



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 100/261 (38%), Gaps = 14/261 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S RI   +   +AF+ +  ++  + +GIQ   +P        +  +  SL      T   
Sbjct: 11  SLRIVVPVAVGIAFLCLWEVLVRV-NGIQPFVLPAPSRIAESLAANFGSLMGSLWVTLRV 69

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++A +++ +     A L ++SR + M L P   ++Q  P++      +++         
Sbjct: 70  TIAAFLLAAVGGVGLAVLFSQSRHIEMALFPYAIVLQVTPVVSIAPLILIWVGYDN---- 125

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A +   +    + +  +    L +   +L ++ R +  S WQ    L +P ++P 
Sbjct: 126 --VEFALLILAWIVAFFPILSNTTLGLRSADHNLRDLFRLYGASRWQVLMELQLPSALPY 183

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TM 248
           ++  + +S        V +E +          G+   I  A    D+  +  A+    T+
Sbjct: 184 ILAGLKISGGLALIGAVVAEFVAGSG---AATGLAWRIVEAGNRLDIPRMFAALFLLSTL 240

Query: 249 LGVIFLYDQLLF-RPMIVWSN 268
              IF    LL  R +  W  
Sbjct: 241 GICIFFGLTLLEKRILQRWHE 261


>gi|83954704|ref|ZP_00963415.1| hypothetical protein NAS141_15823 [Sulfitobacter sp. NAS-14.1]
 gi|83840988|gb|EAP80159.1| hypothetical protein NAS141_15823 [Sulfitobacter sp. NAS-14.1]
          Length = 249

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 76/234 (32%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + +   + W  +   + +          +    +     ++     T++  +   ++   
Sbjct: 6   LIFGFFLIWEVLCVLLDVSDLVLPRPSEILVTLWIKFPILVPHILQTLYSTLTGFVLGVA 65

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I   +G+ +G      +   P     ++ P     P+ V               L  +  
Sbjct: 66  IGTALGVMVGTSKVAYAVASPLLVGFSSIPKVAVVPIFVLWFGSGTT----PAVLTAMVI 121

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + I+ N+  G +    D ++V  +   +       + LP   PY+      A   ++ 
Sbjct: 122 CVFPIVVNIATGLATTEPDLEDVLKTLGASKREILWNVGLPRTMPYFFAALKVAITLSFV 181

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +++SE  +         G+G  +  ++       V  G++I+    +AL    
Sbjct: 182 GAVLSETVA------SNRGIGNVMMTASSNFQVSLVFAGLIILALLGVALYSLF 229



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 98/251 (39%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F L+  ++ +LL  + +  +PR    +V + +    L  +  +T    L+  V+ + 
Sbjct: 7   IFGFFLIWEVLCVLLD-VSDLVLPRPSEILVTLWIKFPILVPHILQTLYSTLTGFVLGVA 65

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    V  P+L    SIP +  +   V++F +            A+  
Sbjct: 66  IGTALGVMVGTSKVAYAVASPLLVGFSSIPKVAVVPIFVLWFGSG--------TTPAVLT 117

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                V+ +  ++   L     DLE+V ++   S  +  W +G+P +MP     + ++++
Sbjct: 118 AMVICVFPIVVNIATGLATTEPDLEDVLKTLGASKREILWNVGLPRTMPYFFAALKVAIT 177

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             +   V SE +          GIG+ +  A     +  +   ++ +  +         L
Sbjct: 178 LSFVGAVLSETVASN------RGIGNVMMTASSNFQVSLVFAGLIILALLGVALYSLFSL 231

Query: 259 LFRPMIVWSNK 269
           L R +  W+ +
Sbjct: 232 LERRVTGWATR 242


>gi|222099160|ref|YP_002533728.1| ABC transporter, permease protein, cysTW family [Thermotoga
           neapolitana DSM 4359]
 gi|221571550|gb|ACM22362.1| ABC transporter, permease protein, cysTW family [Thermotoga
           neapolitana DSM 4359]
          Length = 250

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              LV  ++      + +  +P+    +  +      L  ++  T    LS + I L+  
Sbjct: 11  WIFLVATLVVWEFSNVPQYLLPKPSSIVSQMISQWRILLVHSLYTIAESLSGLAIGLVIG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L    + +  +L P+L + Q+IPI+      V++F      K        +  + 
Sbjct: 71  VGLAVLMDTFQFIREILYPVLIVSQAIPIVAVAPLVVIWFGLGIGTK--------VGVVA 122

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +  +    I  D  ++ R  + +  Q + YL +P ++P +   + +S    
Sbjct: 123 FVTLFPVALNTLEGFRTIDPDALDLFRVMKATRTQIYRYLIIPHTLPYVFSGLKIS---A 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLF 260
            + VV++   V+G+ +    G+G Y+  A+       +  +++ ++ +   +F    LL 
Sbjct: 180 TYAVVSA---VIGEWLGAEKGLGIYMIRAMNTFRADRLFVSIVIVVILSVAVFKMVDLLS 236

Query: 261 RPMIVW 266
           R    W
Sbjct: 237 RRFTPW 242



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 19/246 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           W  +V  + +        Y++   +            ++     T+   +  + I  +I 
Sbjct: 11  WIFLVATLVVWEFSNVPQYLLPKPSSIVSQMISQWRILLVHSLYTIAESLSGLAIGLVIG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + +     I   + P   +  A P     PLVV                ++ F T 
Sbjct: 71  VGLAVLMDTFQFIREILYPVLIVSQAIPIVAVAPLVVIWFGLGIGTKVG----VVAFVTL 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N + G      D  ++      T  + +RY+I+P   PY  +G   +   A  ++
Sbjct: 127 FPVALNTLEGFRTIDPDALDLFRVMKATRTQIYRYLIIPHTLPYVFSGLKISATYAVVSA 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---VLALNRFLWHPLY 578
           ++ E            GLG Y+  +        + + ++I+      V  +   L     
Sbjct: 187 VIGEWLGAEK------GLGIYMIRAMNTFRADRLFVSIVIVVILSVAVFKMVDLLSRRFT 240

Query: 579 LYGTRC 584
            +    
Sbjct: 241 PWFEER 246


>gi|16800529|ref|NP_470797.1| hypothetical protein lin1461 [Listeria innocua Clip11262]
 gi|16413934|emb|CAC96692.1| lin1461 [Listeria innocua Clip11262]
          Length = 504

 Score = 90.0 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|255029765|ref|ZP_05301716.1| hypothetical protein LmonL_13144 [Listeria monocytogenes LO28]
          Length = 499

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|16803462|ref|NP_464947.1| hypothetical protein lmo1422 [Listeria monocytogenes EGD-e]
 gi|224499724|ref|ZP_03668073.1| hypothetical protein LmonF1_08539 [Listeria monocytogenes Finland
           1988]
 gi|224501636|ref|ZP_03669943.1| hypothetical protein LmonFR_03817 [Listeria monocytogenes FSL
           R2-561]
 gi|254829819|ref|ZP_05234474.1| hypothetical protein Lmon1_00620 [Listeria monocytogenes 10403S]
 gi|284801808|ref|YP_003413673.1| hypothetical protein LM5578_1563 [Listeria monocytogenes 08-5578]
 gi|284994950|ref|YP_003416718.1| hypothetical protein LM5923_1515 [Listeria monocytogenes 08-5923]
 gi|16410851|emb|CAC99500.1| lmo1422 [Listeria monocytogenes EGD-e]
 gi|284057370|gb|ADB68311.1| hypothetical protein LM5578_1563 [Listeria monocytogenes 08-5578]
 gi|284060417|gb|ADB71356.1| hypothetical protein LM5923_1515 [Listeria monocytogenes 08-5923]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|168187592|ref|ZP_02622227.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum C str. Eklund]
 gi|169294545|gb|EDS76678.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum C str. Eklund]
          Length = 269

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT F  ++  ++++I+   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHISITCFETILGFLLSTILGTVIAILLWWSDFACKVLDPYLVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    + N+++G      D  ++  +F  + ++  RY
Sbjct: 128 IIFWVG----NGTSAIVLITVLISIVVTILNILSGFKEIDEDKIKLLKTFGASKFQILRY 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G +W   I+ E        +  +GLG  I    +      V+
Sbjct: 184 LVIPATIPTIIASLKINVGLSWVGVIMGEFL------VAKSGLGFLIIFGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLALNRFL 573
           + +LI+      +   +
Sbjct: 238 MSILILSILAFLMYELV 254



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 88/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++ S T    +   ++S +   V A L   S     VL 
Sbjct: 51  TSTPSRMWKSLIKIYSEGTLFKHISITCFETILGFLLSTILGTVIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N     V+   L +I             ++      I
Sbjct: 111 PYLVVLNALPKVALAPIIIFWVGNGTSAIVLITVLISIVV--------TILNILSGFKEI 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  S +Q   YL +P ++P ++ ++ +++   W  V+  E +V       
Sbjct: 163 DEDKIKLLKTFGASKFQILRYLVIPATIPTIIASLKINVGLSWVGVIMGEFLVAKS---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  + FL  +L+
Sbjct: 219 --GLGFLIIFGGQISQLDMVMMSILILSILAFLMYELV 254


>gi|241662740|ref|YP_002981100.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|309782337|ref|ZP_07677063.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|240864767|gb|ACS62428.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
 gi|308918873|gb|EFP64544.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 263

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L L+     +   L  +
Sbjct: 234 VFALVLDWLVGLMEKRLMRW 253



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
             ++ +     + D    L+ + ++ W  K
Sbjct: 227 AGIVVLTVFALVLDWLVGLMEKRLMRWQPK 256


>gi|119387604|ref|YP_918638.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378179|gb|ABL72942.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 259

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 10/200 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     +     IT+    +  +I ++  +  G W+  RP +++   P+ +   A P 
Sbjct: 51  VAWFRSGEIWRHLWITLIEAALAFVIGAVAAMIAGFWLARRPKLAAVFDPYVKAANALPR 110

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V  P+          +       L+ F     + FNV  G         + A    ++ 
Sbjct: 111 VVLAPIFTLWFGLGIWSKVALGFTLVFFI----VFFNVYQGVKEVNRTVLQNARMLGMSE 166

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +  R++ LP    +  +    + G A   ++V E          + GLG  IA++    
Sbjct: 167 RQLLRHVYLPSALSWVFSSLHVSIGFAVVGAVVGEYLG------SSAGLGYLIAQAEGMF 220

Query: 551 SFPEVVLGVLIMCCFVLALN 570
               V  G+ ++  FVL ++
Sbjct: 221 DIAGVFAGMFVLSAFVLLID 240



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 91/229 (39%), Gaps = 17/229 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P D+   +        + ++   T +    A VI  +   +     A+  +L  V  P
Sbjct: 41  STPADVFWQIVAWFRSGEIWRHLWITLIEAALAFVIGAVAAMIAGFWLARRPKLAAVFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    ++P +       ++F      KV        F +F        F++YQ +  + 
Sbjct: 101 YVKAANALPRVVLAPIFTLWFGLGIWSKVALGFTLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R + + +R   +S  Q   ++ +P ++  +  ++ +S+    F VV +   VVG+ +   
Sbjct: 153 RTVLQNARMLGMSERQLLRHVYLPSALSWVFSSLHVSIG---FAVVGA---VVGEYLGSS 206

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSN 268
            G+G  IA A    D+  +   M  +   + L D    ++ R ++VW  
Sbjct: 207 AGLGYLIAQAEGMFDIAGVFAGMFVLSAFVLLIDWGVTMVERKLLVWQP 255


>gi|47095373|ref|ZP_00232983.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254827710|ref|ZP_05232397.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL N3-165]
 gi|254898412|ref|ZP_05258336.1| hypothetical protein LmonJ_01315 [Listeria monocytogenes J0161]
 gi|254912097|ref|ZP_05262109.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes J2818]
 gi|254936424|ref|ZP_05268121.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes F6900]
 gi|47016194|gb|EAL07117.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258600089|gb|EEW13414.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL N3-165]
 gi|258609016|gb|EEW21624.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes F6900]
 gi|293590065|gb|EFF98399.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes J2818]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|312868033|ref|ZP_07728237.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parasanguinis F0405]
 gi|311096437|gb|EFQ54677.1| ABC transporter, substrate-binding protein, QAT family
           [Streptococcus parasanguinis F0405]
          Length = 506

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 20/203 (9%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ +  I Q+IP +  L   + +             L 
Sbjct: 32  VAIFLTIPLAVYLNSYKKAANWVLQVAGIFQTIPSMALLGLFIPFMGIG--------TLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAILAILFNL 196

Query: 258 LLFRPMIVWSNKFRLERTTGIYP 280
           +L      W  K +L      + 
Sbjct: 197 IL-----KWLEKAKLRTIVAAFA 214



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAVYLNSYKKAANWVLQVAGIFQTIPSMALLGLFIPFMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 92  AIF----PILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAILAILFNLIL 198


>gi|296110685|ref|YP_003621066.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc kimchii IMSNU 11154]
 gi|295832216|gb|ADG40097.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc kimchii IMSNU 11154]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 19/197 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L Q+   T      A+VI+ L     A  A   +R     + I  I Q++P L  L 
Sbjct: 13  LAALWQHVQLTV----IAVVIAALIAIPLAIWAEHHKRYAEWFLQITGIFQTLPSLAVLG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +       P        AA+ A+    +  +  + Y  L  + +D+ +  R+  L  +
Sbjct: 69  LLIPIVGIGTP--------AALIALIIYALLPIFQNTYLGLSGVEQDILDGGRALGLPRY 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P +MP ++  +  +          + +I  G       G+G +I L I   +
Sbjct: 121 ILLRKIQLPLAMPSIIAGIRTATVLIIGTATLASLIGAG-------GLGDFILLGIDRNN 173

Query: 238 LLAILYAMLTMLGVIFL 254
              IL   +    +  +
Sbjct: 174 TNLILIGAIASAALAIM 190



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 11/178 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++IA++I IP+ IW       +        +    P+     L++  V        +
Sbjct: 24  VIAVVIAALIAIPLAIWAEHHKRYAEWFLQITGIFQTLPSLAVLGLLIPIVGIGTPAALI 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G S    D  +   +  +  +   R I LP   P  + G 
Sbjct: 84  ALIIYALL----PIFQNTYLGLSGVEQDILDGGRALGLPRYILLRKIQLPLAMPSIIAGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            TA       + ++ +   G       GLG +I    ++ +   +++G +      + 
Sbjct: 140 RTATVLIIGTATLASLIGAG-------GLGDFILLGIDRNNTNLILIGAIASAALAIM 190


>gi|290509174|ref|ZP_06548545.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|289778568|gb|EFD86565.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 291

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 91/263 (34%), Gaps = 6/263 (2%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P S       +      +     FL++     V+  + + W   V    I         
Sbjct: 11  RPASPVWSHNMKNTTSTPWVQHPRFLKILYPTLVAVAVVLLWQGAVSYFRIPAFLVPSPL 70

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++    +  +  ++     T+   ++  +++ +I   V   +     + + + P+   L 
Sbjct: 71  VMLESLWTHLTPLLLALLFTLKITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQ 130

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++  V    L+  +  +L+      + I+ N   G  +            
Sbjct: 131 VTPIVAIAPLIIIWVKDATLSLVVCATLM----AVFPIISNTTQGLRSVSPGLLSYFRLN 186

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           H + W+    + +P   PY+      + G +   ++V+E  +        TGL   I ++
Sbjct: 187 HASRWQTLVRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGTNTGLAYQILQA 244

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             +   P +   +L++    +AL
Sbjct: 245 GYQLDIPLMFAALLLISLAGIAL 267



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L + ++S++     A +  ++R +   L P +  +Q  PI+      +++  +      
Sbjct: 94  TLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKD------ 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A L+ +       V+ +  +  Q L ++   L    R    S WQ    L +P ++P 
Sbjct: 148 --ATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIPSALPY 205

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM--- 248
               + +S        V +E +          G+   I  A  + D+  +  A+L +   
Sbjct: 206 FFGALRISSGLSLIGAVVAEFVAGTGGTNT--GLAYQILQAGYQLDIPLMFAALLLISLA 263

Query: 249 -LGVIFLYDQLLFRPMIVWSN 268
            + +  +   +  R +  W  
Sbjct: 264 GIALFGVMSWVSRRALSAWHE 284


>gi|261415500|ref|YP_003249183.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371956|gb|ACX74701.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327119|gb|ADL26320.1| ABC transporter, permease protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 320

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +   +V   +  +      G+ +GF    +  I P+ +L+   PA ++ P+ ++      
Sbjct: 126 STKLLVTGFLYGAGFGFITGVLLGFNKKFNYWINPYIKLIGPIPATIWIPISLTIFPTTF 185

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++     + +     +   A P  + EV+ +   +       + +P   P 
Sbjct: 186 G----ASVFIIALSVWFSVALMTSSAIQAVPKAYFEVSRTLGASSAFQIFRVGIPAAMPS 241

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       A+ A + +E+           G+G YI+       +  V  G++++  +
Sbjct: 242 IFLGVFYGIISAFLALMTAEMFG------VKYGIGWYISWQKAMLVYSGVYAGIIVIAVY 295

Query: 566 VLALNRFLWH 575
            + +   L+ 
Sbjct: 296 CMLILTLLFK 305



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +T  +++  +    F F+   L   +++    + P + ++  IP   ++  ++  F   
Sbjct: 125 HSTKLLVTGFLYGAGFGFITGVLLGFNKKFNYWINPYIKLIGPIPATIWIPISLTIFPTT 184

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +         A++F I  S  +++      ++  +P+   EVSR+   S   + + +G+P
Sbjct: 185 FG--------ASVFIIALSVWFSVALMTSSAIQAVPKAYFEVSRTLGASSAFQIFRVGIP 236

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP +   +   +   +  ++ +EM  V        GIG YI+          +   ++
Sbjct: 237 AAMPSIFLGVFYGIISAFLALMTAEMFGVK------YGIGWYISWQKAMLVYSGVYAGII 290

Query: 247 TMLGVIFLYDQLLFR 261
            +     L   LLF+
Sbjct: 291 VIAVYCMLILTLLFK 305


>gi|300704429|ref|YP_003746032.1| ABC transporter permease [Ralstonia solanacearum CFBP2957]
 gi|299072093|emb|CBJ43425.1| putative ABC-type transport system, permease component [Ralstonia
           solanacearum CFBP2957]
          Length = 263

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L L+     +   L  +
Sbjct: 234 VFALVLDWLVGLVEKRLMRW 253



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
             ++ +     + D    L+ + ++ W  K
Sbjct: 227 AGIVVLTVFALVLDWLVGLVEKRLMRWQPK 256


>gi|91226673|ref|ZP_01261362.1| ABC transporter permease protein [Vibrio alginolyticus 12G01]
 gi|91188970|gb|EAS75253.1| ABC transporter permease protein [Vibrio alginolyticus 12G01]
          Length = 266

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 17/249 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L +  + +++  +    +P  I  +  +      L ++   T   +L  + + L   
Sbjct: 32  AVILGLWQLVVVIFDMPSFILPSPIEVLDRLVTRYDVLLKHTWVTAQEILLGLALGLSMG 91

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            ++A        L   L+PIL   Q+IP+       +++       KV+ A +   F + 
Sbjct: 92  LLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFFPVT 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++   
Sbjct: 152 TCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV--- 200

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   L 
Sbjct: 201 ---VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL 257

Query: 261 RPMIVWSNK 269
           +  I W +K
Sbjct: 258 KKAIPWESK 266



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +++ + +   + +   + +     +   + P      A P     P+++  + Y 
Sbjct: 75  VTAQEILLGLALGLSMGLLFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  ++++ F     +      G    P  + ++A +   + W+  R+I LP   P
Sbjct: 135 IASKVVMAAIIIFF----PVTTCCYDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  + ++  +    E+   + I+  
Sbjct: 191 TLASGIRVAVVIAPIGAVVGEWVG------SSEGLGYLMLQANARMIIDEMFAALFILAV 244

Query: 565 FVLAL 569
             ++L
Sbjct: 245 LSISL 249


>gi|47092712|ref|ZP_00230498.1| glycine betaine/carnitine/choline ABC [Listeria monocytogenes str.
           4b H7858]
 gi|254824518|ref|ZP_05229519.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL J1-194]
 gi|254852535|ref|ZP_05241883.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL R2-503]
 gi|254932607|ref|ZP_05265966.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes HPB2262]
 gi|255521343|ref|ZP_05388580.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes FSL J1-175]
 gi|300765775|ref|ZP_07075751.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL N1-017]
 gi|47018900|gb|EAL09647.1| glycine betaine/carnitine/choline ABC [Listeria monocytogenes str.
           4b H7858]
 gi|258605843|gb|EEW18451.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL R2-503]
 gi|293584166|gb|EFF96198.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes HPB2262]
 gi|293593757|gb|EFG01518.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL J1-194]
 gi|300513550|gb|EFK40621.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL N1-017]
 gi|328465469|gb|EGF36698.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes 1816]
 gi|328475019|gb|EGF45811.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes 220]
 gi|332311863|gb|EGJ24958.1| Similiar to glycine betaine/carnitine/choline ABC transporter
           [Listeria monocytogenes str. Scott A]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|300311840|ref|YP_003775932.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300074625|gb|ADJ64024.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 289

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 6/165 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +  ++    +    PA    PL +        +    +  +++    W +  N  
Sbjct: 116 SSRIGNDLLETLTSMFNPLPAIALLPLALIWFGLGTGS----IIFVLVHSVLWAVALNTH 171

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  A  N  + V  ++ +  +   + I++P  FP  +TG       AW   I +E+   
Sbjct: 172 GGFRAVSNTLRMVGQNYGLRRFSLVKSILIPAAFPSILTGLKVGWAFAWRTLIAAELVFG 231

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
             +     GLG YI E+  +     V  G+  +    L +   ++
Sbjct: 232 --VSSGAGGLGWYIFENRNQLETANVFSGLFFVIIIGLVVENLIF 274



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 90/239 (37%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL    +  +    L          + V      +    L Q A+ +   +L    + +L
Sbjct: 46  LLVLAAIWEVYGRWLDNALLFPSFSETVQAFLSGIGSGVLLQRAAVSMQTLLVGYGLGIL 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+A  SR    +L  +  +   +P +  L   +++F             + IF 
Sbjct: 106 LAGLLTTVAISSRIGNDLLETLTSMFNPLPAIALLPLALIWFGLGTG--------SIIFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     +   L  V +++ L  +     + +P + P ++  + +  +
Sbjct: 158 LVHSVLWAVALNTHGGFRAVSNTLRMVGQNYGLRRFSLVKSILIPAAFPSILTGLKVGWA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G YI     + +   +   +  ++ +  + + L+F
Sbjct: 218 FAWRTLIAAELVFGVSS--GAGGLGWYIFENRNQLETANVFSGLFFVIIIGLVVENLIF 274


>gi|313608809|gb|EFR84610.1| BilEB [Listeria monocytogenes FSL F2-208]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|313905553|ref|ZP_07838916.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313469616|gb|EFR64955.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 251

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             + +R+++  I+  +  +PVG+ +G +  +         LL   P  VF P++V  +  
Sbjct: 54  AASFYRIILGTILGLLFSVPVGLLLGTKKKVDHVAGQLFNLLYPIPKVVFLPVIVVVMGI 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L        L+     + +   +   A   P+   +   S   +  ++ R++++PG  
Sbjct: 114 GDL----PKIFLIALVLFFQLTIVIRDSAKKLPDTLYDSMKSLDASELQFLRHLVIPGCM 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T   ++ G      I + +         T+G+G +I +S +   +  +  GV+ + 
Sbjct: 170 PDILTSVRSSIG------ISTAMLFITENFAATSGIGYFITKSMDARDYERMYAGVIALG 223

Query: 564 CFVLALNRFL 573
              ++L   +
Sbjct: 224 VLGVSLYLLI 233



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 94/247 (38%), Gaps = 16/247 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRM 72
           +   I  + A  +V+ +  +    +Q    P   D V  +   +    +  + + +  R+
Sbjct: 1   MLSKIRKIAALPMVLILWELASRALQRPFFPGVSDSVKTLAELMIDGVIWDHIAASFYRI 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   ++ LLF+     L    +++  V   + +++  IP + FL   VV           
Sbjct: 61  ILGTILGLLFSVPVGLLLGTKKKVDHVAGQLFNLLYPIPKVVFLPVIVVVMGIG------ 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L  IF I     + +T  +  S   +P  L +  +S   S  Q   +L +P  MP +
Sbjct: 115 --DLPKIFLIALVLFFQLTIVIRDSAKKLPDTLYDSMKSLDASELQFLRHLVIPGCMPDI 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           + ++  S+      +  +E            GIG +I  ++  +D   +   ++ +  + 
Sbjct: 173 LTSVRSSIGISTAMLFITENFA------ATSGIGYFITKSMDARDYERMYAGVIALGVLG 226

Query: 253 FLYDQLL 259
                L+
Sbjct: 227 VSLYLLI 233


>gi|289669834|ref|ZP_06490909.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 490

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 19/237 (8%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L  +       + S++ ++LL       L
Sbjct: 258 QVKLERQSEAAVAAHWLGVTPASETDSRVTRLLVHTREHLALVGSSLGLALLLALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPVFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q +F  +  W
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQAVFEGLERW 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 5/157 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 320 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPVFGIG-AKPAIAALFLY---SLLPIVRNTH 375

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 376 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 435

Query: 530 GHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G       TG+         +G+ P  VL +L+   F
Sbjct: 436 GGYGQPILTGIRLDDIGLILEGAIPAAVLALLVQAVF 472


>gi|289665040|ref|ZP_06486621.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 490

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 19/237 (8%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L  +       + S++ ++LL       L
Sbjct: 258 QVKLERQSEAAVAAHWLGVTPASETDSRVTRLLVHTREHLALVGSSLGLALLLALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPVFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q +F  +  W
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQAVFEGLERW 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 5/157 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 320 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPVFGIG-AKPAIAALFLY---SLLPIVRNTH 375

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 376 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 435

Query: 530 GHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G       TG+         +G+ P  VL +L+   F
Sbjct: 436 GGYGQPILTGIRLDDIGLILEGAIPAAVLALLVQAVF 472


>gi|254787385|ref|YP_003074814.1| ABC transporter permease [Teredinibacter turnerae T7901]
 gi|237684872|gb|ACR12136.1| ABC transporter, permease protein [Teredinibacter turnerae T7901]
          Length = 274

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +  + +  R+   + IS     +   L          L P++  +  +P +  L    
Sbjct: 71  LWRDTASSLGRLAVGVSISAACALILGVLMGAIPFARAKLSPLVTAISLVPPMAILPVLF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E++ I  I       MT  + Q +  IP +    +++   + WQ  
Sbjct: 131 IVFGLG--------EVSKIVLIVIGITPFMTRDLLQRVREIPTEQIIKAQTLGANTWQII 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  MP L+  + +S+   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 VRVILPQIMPRLIAAVRLSLGAAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  ++ +  + F+ D LL R
Sbjct: 237 ILPYVIWITFLAFVVDYLLRR 257



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ V + I++   + +G+ +G  P   +K+ P    ++  P     P++      
Sbjct: 76  ASSLGRLAVGVSISAACALILGVLMGAIPFARAKLSPLVTAISLVPPMAILPVLFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G   ++  +++      P +    A +     W+    +ILP I 
Sbjct: 136 GEVSK----IVLIVIGITPFMTRDLLQRVREIPTEQIIKAQTLGANTWQIIVRVILPQIM 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIAAVRLSLGAAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVIWIT 245

Query: 564 CFVLALNRFLWH 575
                ++  L  
Sbjct: 246 FLAFVVDYLLRR 257


>gi|217964430|ref|YP_002350108.1| similiar to glycine betaine/carnitine/choline ABC transporter
           [Listeria monocytogenes HCC23]
 gi|217333700|gb|ACK39494.1| similiar to glycine betaine/carnitine/choline ABC transporter
           [Listeria monocytogenes HCC23]
 gi|307571005|emb|CAR84184.1| bile exclusion locus B [Listeria monocytogenes L99]
          Length = 504

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|15888390|ref|NP_354071.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156072|gb|AAK86856.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 272

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 10/238 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
               +    +  L   W  +V  + +          V     Q    +      T++   
Sbjct: 23  WVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKNSLQTLYTTT 82

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   IA    + +G++IG+   I + + P      A P     P++V           + 
Sbjct: 83  LGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIG----TVP 138

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L     + + I+ NV  G +    + ++V  +           + +P   PY+     
Sbjct: 139 AVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDIMLKVGIPRSMPYFFGSLK 198

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A   A+  S+VSE  +         GLG  ++ +  + + P V  G+L++    +A+
Sbjct: 199 IAITLAFVGSVVSETVA------SNYGLGNMMSSAQSQFNVPLVFAGLLMLAVEGIAM 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 101/273 (36%), Gaps = 19/273 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ--ETTVPRDIVDIVPITLDVHSLPQY 64
             P I R  +      L  + +  +  +L++ ++   T +P  I     I      + + 
Sbjct: 14  RKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKN 73

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + +T         I++            S+ +   L P++    +IP +  +   V++F 
Sbjct: 74  SLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFG 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      + A+   F    + +  ++   L  I  + E+V R+           +G
Sbjct: 134 IG--------TVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDIMLKVG 185

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P SMP    ++ ++++  +   V SE +          G+G+ ++ A  + ++  +   
Sbjct: 186 IPRSMPYFFGSLKIAITLAFVGSVVSETVASN------YGLGNMMSSAQSQFNVPLVFAG 239

Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFRLER 274
           +L +         +   L + M  W+++  + +
Sbjct: 240 LLMLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ 272


>gi|324990838|gb|EGC22773.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK353]
          Length = 506

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|257467783|ref|ZP_05631879.1| substrate-binding region of ABC-type glycine betaine transport
           system [Fusobacterium ulcerans ATCC 49185]
 gi|317062075|ref|ZP_07926560.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313687751|gb|EFS24586.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 523

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 70/186 (37%), Gaps = 15/186 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             +++++++       +    ++    ++   +++Q++P +    F +            
Sbjct: 26  FMSIIMAVVIGIPMGIVITYYQKARKTILGATNVIQAVPSMALFGFLIPLIGIG------ 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +L AI  +    +  +  + Y  L  I     E +    ++ +Q    + +P ++P +
Sbjct: 80  --KLPAIIIVVLYSLLPIVKNTYIGLDGINPLTIEAAEGIGMTKFQILQKVQLPLALPVI 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++       VV S  ++     +   G+G  +   I+  +   IL   +    + 
Sbjct: 138 MGGVRIA-------VVTSVGLMTIAAFVGAGGLGYLVFSGIRTINNYQILAGAIPACILA 190

Query: 253 FLYDQL 258
            L D L
Sbjct: 191 LLIDYL 196



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 11/195 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            + +  C  +F   + II+A +I IP+GI I +       I     ++ A P+   F  +
Sbjct: 13  EIFFFSCEHIFLSFMSIIMAVVIGIPMGIVITYYQKARKTILGATNVIQAVPSMALFGFL 72

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        L   ++++  +   I+ N   G         E A    +T ++  + +
Sbjct: 73  IPLIGIG----KLPAIIIVVLYSLLPIVKNTYIGLDGINPLTIEAAEGIGMTKFQILQKV 128

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G   A   +     ++     G       GLG  +       +  +++ 
Sbjct: 129 QLPLALPVIMGGVRIAVVTSVGLMTIAAFVGAG-------GLGYLVFSGIRTINNYQILA 181

Query: 558 GVLIMCCFVLALNRF 572
           G +  C   L ++  
Sbjct: 182 GAIPACILALLIDYL 196


>gi|148252140|ref|YP_001236725.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146404313|gb|ABQ32819.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 287

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 6/159 (3%)

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++    +    PA    PL +        +    L  ++I    W +  N  +G  +  
Sbjct: 121 FLETVTAMFNPLPAIALLPLALIWFGLGSGS----LVFVLIHSVLWPVALNTHSGFKSVS 176

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           N  + V  ++ +TG+ +   I++P  F   +TG       AW   I +E+     +    
Sbjct: 177 NTLRMVGRNYGLTGFSYVIRILIPAGFGAILTGLKIGWAFAWRTLIAAELVFG--VSSGQ 234

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            GLG +I E+      P V  G+L +    L +   ++ 
Sbjct: 235 GGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENLIFR 273



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 90/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++    +       L          D +  +   +   ++P  A  +   +       + 
Sbjct: 44  IVVLAAIWQAYGSYLDNPLLFPTFSDTIAALWEKVRDGTIPMRAWTSLKVLFMGYAAGIA 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 104 LAAILTVLAISTRIGTDFLETVTAMFNPLPAIALLPLALIWFGLGSG--------SLVFV 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +    ++   L  V R++ L+G+     + +P     ++  + +  +
Sbjct: 156 LIHSVLWPVALNTHSGFKSVSNTLRMVGRNYGLTGFSYVIRILIPAGFGAILTGLKIGWA 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I       ++ A+   +LT++ +  + + L+FR
Sbjct: 216 FAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENLIFR 273


>gi|312116232|ref|YP_004013828.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221361|gb|ADP72729.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 251

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 14/205 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +  TL    L  + S +  R+     +  +   +       S  L  +     
Sbjct: 36  PALVAQTIGETLGSGELWMHLSASLQRIAVGFALGAVAGLLLGAAIGASPSLRALFRTPF 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +M  +  L  L   V+ F           E   +F I  +    +  +  Q +  +   
Sbjct: 96  LVMTQLHALAMLPLIVLVFGID--------EEMKLFVIGWATFIPVVLNTAQGIREVCPA 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             EV R      W +   + +P + P +   +   ++  W  ++ +E+    +      G
Sbjct: 148 WLEVGRVLGFDPWYQATRVVLPAAAPSIFTGIREGLANAWQALILAELFASSE------G 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G  I    +   L  +L A+LT+ 
Sbjct: 202 LGYLIVWGRQLFQLDLVLTAILTIA 226



 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ V   + ++  + +G  IG  P + +  +    ++    A    PL+V      
Sbjct: 58  ASLQRIAVGFALGAVAGLLLGAAIGASPSLRALFRTPFLVMTQLHALAMLPLIVLVFGI- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++ + T   ++ N   G       + EV        W     ++LP   P
Sbjct: 117 ---DEEMKLFVIGWATFIPVVLNTAQGIREVCPAWLEVGRVLGFDPWYQATRVVLPAAAP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG       AW A I++E+ +       + GLG  I    +      V+  +L +  
Sbjct: 174 SIFTGIREGLANAWQALILAELFA------SSEGLGYLIVWGRQLFQLDLVLTAILTIAL 227

Query: 565 FVLALNRFLW---HPLYLY 580
             L LN  L      LY +
Sbjct: 228 VGLLLNGVLGIAERRLYRW 246


>gi|257468775|ref|ZP_05632869.1| glycine betaine transport system permease protein [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063030|ref|ZP_07927515.1| glycine betaine transport system permease [Fusobacterium ulcerans
           ATCC 49185]
 gi|313688706|gb|EFS25541.1| glycine betaine transport system permease [Fusobacterium ulcerans
           ATCC 49185]
          Length = 512

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 67/187 (35%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +A++I+ +          + R    +++  ++ + +IP +  L F + +          
Sbjct: 28  FTAVIIAAVIGLGIGIFIERFRYTSKIVLLAVNFLYTIPSIALLGFLIPFSGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + Y  L N+   + E S+    + WQ  + +  P + P +
Sbjct: 82  --NKTAITALIIYAMLPMVRNTYIGLANVSPAILEASKGMGSTKWQTLFRIKFPLAFPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                         V  +  +    + I   G+G  I   I   + +  +   L +  + 
Sbjct: 140 FSGFR-------SMVTMTIALAGIASFIGAGGLGVAIYRGITTNNPIMTMAGSLLIALLA 192

Query: 253 FLYDQLL 259
             +D +L
Sbjct: 193 IFFDTIL 199



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +IIA++I + +GI+I    + S  +      L   P+      ++      +     
Sbjct: 28  FTAVIIAAVIGLGIGIFIERFRYTSKIVLLAVNFLYTIPSIALLGFLIPFSGIGNKTAIT 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E +     T W+    I  P  FP   +G 
Sbjct: 88  ALIIYAML----PMVRNTYIGLANVSPAILEASKGMGSTKWQTLFRIKFPLAFPVIFSGF 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +          ++   +     +   GLG  I       +    + G L++    +  +
Sbjct: 144 RS-------MVTMTIALAGIASFIGAGGLGVAIYRGITTNNPIMTMAGSLLIALLAIFFD 196

Query: 571 RFL 573
             L
Sbjct: 197 TIL 199


>gi|187928137|ref|YP_001898624.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|187725027|gb|ACD26192.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
          Length = 263

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN---RFLWHPLYLY 580
            F L L+     +   L  +
Sbjct: 234 VFALVLDWLVGLMEKRLMRW 253



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             ++ +     + D L+    + ++ W  K
Sbjct: 227 AGIVVLTVFALVLDWLVGLMEKRLMRWQPK 256


>gi|296161510|ref|ZP_06844316.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295888325|gb|EFG68137.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 275

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 83/218 (38%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++           L      +  R    ++I      +    A  S+       
Sbjct: 57  LPAPASVLTAYRELWQSGDLQDALKISLARAALGLLIGGGAGLLLGVAAGLSKSAERGFD 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +L ++++IP +  +   VV+F           EL+ +  I  + +  M  S Y ++  I
Sbjct: 117 TVLQMLRTIPFIALVPIFVVWFGIG--------ELSKVALIVGAAISPMYLSTYHAIRGI 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E+ R+FRL+   +   + +P ++PG++  +  S +     +VA+E I        
Sbjct: 169 DPKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQINASA---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             GIG  +  A + Q    I+  +L    +    D LL
Sbjct: 225 --GIGFILNNANQFQRTDIIIAGILVYAALGIAVDALL 260



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 10/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                       Q+L   P     P+ V       L+       L++      +  +   
Sbjct: 108 SKSAERGFDTVLQMLRTIPFIALVPIFVVWFGIGELSK----VALIVGAAISPMYLSTYH 163

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     E+  +F +T     R IILP   P  + G   +   +  A + +E  +  
Sbjct: 164 AIRGIDPKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQIN-- 221

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + G+G  +  + +      ++ G+L+     +A++  L
Sbjct: 222 ----ASAGIGFILNNANQFQRTDIIIAGILVYAALGIAVDALL 260


>gi|182417120|ref|ZP_02948495.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium butyricum 5521]
 gi|237668164|ref|ZP_04528148.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378962|gb|EDT76468.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium butyricum 5521]
 gi|237656512|gb|EEP54068.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 280

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 96/241 (39%), Gaps = 17/241 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAW-------QSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           VS +L +  F  +  +A  + W            I +  +  +   +     IT +  ++
Sbjct: 38  VSRILILIVFIGLWQIAADLKWIDPFLTSSPSRVIKSCISLYEDGTLFKHIGITCYETIL 97

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              + +I+ + + + + + P +S  + P+  +L A P     P+++  +     N    +
Sbjct: 98  GFSLGTILGVIIAVILWWYPTVSKILDPYLVVLNALPKVALAPIIIFWIG----NGMPAI 153

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++ +  +    + +V++G +   N+   +  +F  +  +  RY+I P   P +++    
Sbjct: 154 IVIALLISIVTTIISVLSGFNEIDNEKIMLMKTFKASKLQILRYLIFPYSIPVFISALKI 213

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G +W   I+ E        +  +GLG  I    +      V++ ++I+      +   
Sbjct: 214 NVGLSWVGVIMGEFL------VAKSGLGFLIVYGGQVAQLDTVMMSIVILSVIAFLMYEI 267

Query: 573 L 573
           +
Sbjct: 268 V 268



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 89/239 (37%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+ +  I   L       T     V    I+L +  +L ++   T    +    +  
Sbjct: 44  LIVFIGLWQIAADLKWIDPFLTSSPSRVIKSCISLYEDGTLFKHIGITCYETILGFSLGT 103

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   + A +      +  +L P L ++ ++P +      + +  N  P        A I 
Sbjct: 104 ILGVIIAVILWWYPTVSKILDPYLVVLNALPKVALAPIIIFWIGNGMP--------AIIV 155

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                 +     S+      I  +   + ++F+ S  Q   YL  P+S+P  +  + +++
Sbjct: 156 IALLISIVTTIISVLSGFNEIDNEKIMLMKTFKASKLQILRYLIFPYSIPVFISALKINV 215

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W  V+  E +V         G+G  I    +   L  ++ +++ +  + FL  +++
Sbjct: 216 GLSWVGVIMGEFLVAKS------GLGFLIVYGGQVAQLDTVMMSIVILSVIAFLMYEIV 268


>gi|262044213|ref|ZP_06017283.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259038443|gb|EEW39644.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 330

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 88/271 (32%), Gaps = 11/271 (4%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R   +S     +  +     L               L       +  +L   W  +    
Sbjct: 45  RRWPFSEGWALAQFTLGGGLLLALSYRYWRARGARVLHAGKWLALLPVLFAVWEGLTAKT 104

Query: 356 AIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           A+  + + +    +    + D   ++     ++  + + +++ +      G+ IG+   I
Sbjct: 105 AVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIGWSQRI 164

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  +LL   P+    PL +                L+   T + +     +G   
Sbjct: 165 GYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPVTVLTWSGVMG 220

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
               + +VA +   +       + +P   P    G     G +++  IV+E+        
Sbjct: 221 IDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVG------ 274

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G+G Y+  +    ++P +   +L+M   
Sbjct: 275 VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 305



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 151 GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 202

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 203 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 262

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 263 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 316

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 317 RDRLLSWQ 324


>gi|89901519|ref|YP_523990.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
 gi|89346256|gb|ABD70459.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
          Length = 283

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 13/191 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              I +++ + VG+W+   P  S+ + P+ +   + P  +  P+          +     
Sbjct: 93  AFGIGTVMGLGVGLWLALSPLTSAILDPYIKAANSMPRVILAPIFGMWFGLGIWSKVALA 152

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+ F     + FNV  G           A        +  R + LP    +  +   T
Sbjct: 153 ITLVFFI----VFFNVYQGVKEVSPVVLANARMLGANARQLLRSVYLPSATSWVFSSLHT 208

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN-- 570
           + G A+  +IV E            G+G  I ++        V  G+L++  F L L+  
Sbjct: 209 SVGLAFVGAIVGEYMG------SARGVGYLILQAEGTFDINTVFAGILVLTLFALVLDGA 262

Query: 571 -RFLWHPLYLY 580
              +   L  +
Sbjct: 263 VGLVEKRLMKW 273



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +  +   T    L A  I  +         A S     +L P +    S+P +    
Sbjct: 76  PGEIYSHLLITLTETLLAFGIGTVMGLGVGLWLALSPLTSAILDPYIKAANSMPRVILAP 135

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      KV  A     F +F        F++YQ +  +   +   +R    +  
Sbjct: 136 IFGMWFGLGIWSKVALAITLVFFIVF--------FNVYQGVKEVSPVVLANARMLGANAR 187

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P +   +  ++  S+   +   +      VG+ +    G+G  I  A    D
Sbjct: 188 QLLRSVYLPSATSWVFSSLHTSVGLAFVGAI------VGEYMGSARGVGYLILQAEGTFD 241

Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           +  +   +L +     + D    L+ + ++ W  K
Sbjct: 242 INTVFAGILVLTLFALVLDGAVGLVEKRLMKWQPK 276


>gi|89053964|ref|YP_509415.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863513|gb|ABD54390.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 283

 Score = 90.0 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            ++R    E   +      V  +    W  VV    I         +V    + D   + 
Sbjct: 18  RIVRRKKTEAIARWVIPLLVMGLAIYAWHRVVAVNEIPHYVLPGPGLVLETLWTDRDILF 77

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+   ++ ++IA +  + + I             PFA +L   P     PL+   
Sbjct: 78  PALLVTLRITMLALLIAIVGGVGLAILFAQSKFAEMSFSPFAVILQVTPIVSIAPLIFIY 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    +   L   ++      + +L N   G  +  ++ +++ S +  + W+   ++ LP
Sbjct: 138 IENRLVGLLLCAWIV----AFFPVLANTTLGLKSADHNLRDLFSIYRASRWQRLVHLQLP 193

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY++ G   A G A   ++V+E  +        +GL   I E+  + + P +   ++
Sbjct: 194 SALPYFLGGLKIAGGLALIGAVVAEYVAGSGGL--ASGLAFRILEAGYRLNIPRMFAALI 251

Query: 561 IMCCFVLAL 569
           ++    + +
Sbjct: 252 LIAATGVVI 260



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 77/200 (38%), Gaps = 10/200 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D   L      T    + A++I+++     A L A+S+   M   P   I+Q  PI+  
Sbjct: 71  TDRDILFPALLVTLRITMLALLIAIVGGVGLAILFAQSKFAEMSFSPFAVILQVTPIVSI 130

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                +Y  N   G ++ A + A F +          +    L +   +L ++   +R S
Sbjct: 131 APLIFIYIENRLVGLLLCAWIVAFFPVLA--------NTTLGLKSADHNLRDLFSIYRAS 182

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ+  +L +P ++P  +  + ++        V +E +     +    G+   I  A   
Sbjct: 183 RWQRLVHLQLPSALPYFLGGLKIAGGLALIGAVVAEYVAGSGGL--ASGLAFRILEAGYR 240

Query: 236 QDLLAILYAMLTMLGVIFLY 255
            ++  +  A++ +     + 
Sbjct: 241 LNIPRMFAALILIAATGVVI 260


>gi|317053575|ref|YP_004118709.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952680|gb|ADU72153.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 288

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 86/206 (41%), Gaps = 10/206 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            +    LP  A  +   +L   ++  L   +++ LA  +R    +L  +  +   +P + 
Sbjct: 78  DIASGELPNRAWLSVSLLLKGYILGTLLALLFSALAISTRIGRDLLSTLTAMFNPLPAIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L  ++++F             + +F I  S +W M  + +     +   L+   R++ L
Sbjct: 138 LLPLSLLWFGLGN--------ASLVFVIVHSVIWPMALNTWSGFMGVSDTLKMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            GW+   ++ +P ++P L+  + +  +  W  ++A+E++    +       G YI     
Sbjct: 190 KGWRYVAWILIPAALPALLSGLKIGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRN 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
           E     +   ++T+  +  L + L+F
Sbjct: 248 EMYTDRVFAGLVTVTVIGLLVEGLVF 273



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 9/224 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ+   +       ++    WL    + +     I+ +++ +               +  
Sbjct: 69  WQTFTALREDIASGELPNRAWLSVSLLLK---GYILGTLLALLFSALAISTRIGRDLLST 125

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +    PA    PL +      + +    L  +++    W +  N  +G     +  K
Sbjct: 126 LTAMFNPLPAIALLPLSLLWFGLGNAS----LVFVIVHSVIWPMALNTWSGFMGVSDTLK 181

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
               ++ + GWR+  +I++P   P  ++G       AW   I +E+             G
Sbjct: 182 MAGRNYGLKGWRYVAWILIPAALPALLSGLKIGWAFAWRTLIAAELVFGASSGSGGL--G 239

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            YI ++  +     V  G++ +    L +   ++  L     + 
Sbjct: 240 WYIFQNRNEMYTDRVFAGLVTVTVIGLLVEGLVFSTLEKLTIKR 283


>gi|283781062|ref|YP_003371817.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Pirellula staleyi DSM 6068]
 gi|283439515|gb|ADB17957.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Pirellula staleyi DSM 6068]
          Length = 516

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 19/212 (8%)

Query: 52  VPITLDVHSLPQYASRTTLR----MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +P       L +   RTTL     +  ++  +++        + +  +LG V++  + I+
Sbjct: 302 LPTDSRWGKLARDLLRTTLEHLRLVAISLFAAIVIAIPLGIASFRYPKLGYVILGAVGII 361

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           Q++P L  L F +               L AI A+F   +  +  S Y  L +IP +L E
Sbjct: 362 QTLPSLAVLVFMIPLLGLG--------ALPAIAALFLYSLLPIVRSTYTGLRDIPANLRE 413

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +    L    + W + +P +   ++  +  +       V+      +G  +I   G G 
Sbjct: 414 SATVLGLDQRAQLWQVELPLASRSILSGIKTA------AVINVGAATIG-ALIGAGGYGQ 466

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            I   I+  D+  +L   +    +  + D L 
Sbjct: 467 PILTGIRLNDVGLLLQGAVPAAILATVVDALF 498



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 6/185 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + +  A +I IP+GI     P +   I     ++   P+      ++  +    L   
Sbjct: 326 VAISLFAAIVIAIPLGIASFRYPKLGYVILGAVGIIQTLPSLAVLVFMIPLLGLGAL--- 382

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 +   +   I+ +   G    P + +E A+   +        + LP      ++G
Sbjct: 383 -PAIAALFLYSLLPIVRSTYTGLRDIPANLRESATVLGLDQRAQLWQVELPLASRSILSG 441

Query: 510 AITACGGAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             TA      A+ +  +   G       TG+         +G+ P  +L  ++   F  A
Sbjct: 442 IKTAAVINVGAATIGALIGAGGYGQPILTGIRLNDVGLLLQGAVPAAILATVVDALFGYA 501

Query: 569 LNRFL 573
             RF+
Sbjct: 502 -ERFI 505


>gi|260588477|ref|ZP_05854390.1| putative ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|331082246|ref|ZP_08331373.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540952|gb|EEX21521.1| putative ABC transporter, permease protein [Blautia hansenii DSM
           20583]
 gi|330403040|gb|EGG82605.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 255

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 93/247 (37%), Gaps = 15/247 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI-----WLGCITMFRV 390
            N+++     +FW  V    ++ +  + +         +   ++         C ++FR+
Sbjct: 9   KNRKIKLWAVLFWLLVWEIASLWLGQEILLVSPVAVLKRLGSFIFEASFWKTICFSLFRI 68

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +    +A +  +  G      P I     P    + + P   F  L++  V   +L+  +
Sbjct: 69  IGGFFLAVLAGVLGGSIASRLPKIQELFAPLILAMKSVPVASFVILILIWVPSENLS--V 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +S LM+F     I  NV+ G      +  E+A  F ++G    RYI L  + P++  G 
Sbjct: 127 TISFLMVFPV---IYTNVLNGIQNTDKNLLEMAQVFQVSGKNKIRYIYLSEVLPFFRAGC 183

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + G  W A + +EV       +     G  + E+      P++    +++    +   
Sbjct: 184 SVSLGLCWKAGVAAEVIGIPDGSM-----GERLYEAKVYLDTPDLFAWTMVILIVSMIFE 238

Query: 571 RFLWHPL 577
           +     L
Sbjct: 239 KIFLAAL 245



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 110/254 (43%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ +L ++LV  I ++ L        P  ++  +   +   S  +    +  R++    +
Sbjct: 15  LWAVLFWLLVWEIASLWLGQEILLVSPVAVLKRLGSFIFEASFWKTICFSLFRIIGGFFL 74

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++L   +  ++A++  ++  +  P++  M+S+P+  F+   +++         + +E  +
Sbjct: 75  AVLAGVLGGSIASRLPKIQELFAPLILAMKSVPVASFVILILIW---------VPSENLS 125

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F      +  ++   + N  ++L E+++ F++SG  K  Y+ +   +P       +
Sbjct: 126 VTISFLMVFPVIYTNVLNGIQNTDKNLLEMAQVFQVSGKNKIRYIYLSEVLPFFRAGCSV 185

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+   W   VA+E+I + D  +     G  +  A    D   +    + +L V  +++++
Sbjct: 186 SLGLCWKAGVAAEVIGIPDGSM-----GERLYEAKVYLDTPDLFAWTMVILIVSMIFEKI 240

Query: 259 LFRPM---IVWSNK 269
               +   + W  +
Sbjct: 241 FLAALDKAVSWVER 254


>gi|296128155|ref|YP_003635405.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296019970|gb|ADG73206.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 286

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 13/174 (7%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P +        + L   P+    PL V               +++++   W +   V+
Sbjct: 113 LVPFLRRATHTTVEFLRPIPSVAIIPLAVLLAGLSR----EAALVIVVYAPFWQVFVQVL 168

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G         + A SF +  W+  R+++LP   PY +TG   A   A   +I +E+   
Sbjct: 169 YGVGDVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLAASIALVLTITAELV-- 226

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
               +   G+G  I         P +   VL+     L +N   R +   +  +
Sbjct: 227 ----IGNPGIGRQIDVYRSNADAPGLYALVLVTGGLGLLVNLATRLVERRVLHW 276



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 75/186 (40%), Gaps = 17/186 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L       ++ ++ IP +  +   V+            +  AA+  +  +  W +   
Sbjct: 115 PFLRRATHTTVEFLRPIPSVAIIPLAVLLAGL--------SREAALVIVVYAPFWQVFVQ 166

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   + ++    ++ +RSF L  WQ+  ++ +P ++P ++    ++ S      + +E++
Sbjct: 167 VLYGVGDVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLAASIALVLTITAELV 226

Query: 214 VVGDTVIPLPGIGSYIALAIKEQD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           +        PGIG  I +     D   L A++     +  ++ L  +L+ R ++ W    
Sbjct: 227 IGN------PGIGRQIDVYRSNADAPGLYALVLVTGGLGLLVNLATRLVERRVLHWHPSV 280

Query: 271 RLERTT 276
           R E   
Sbjct: 281 RKEGVA 286


>gi|315282310|ref|ZP_07870745.1| BilEB [Listeria marthii FSL S4-120]
 gi|313614046|gb|EFR87755.1| BilEB [Listeria marthii FSL S4-120]
          Length = 504

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|326204185|ref|ZP_08194045.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
 gi|325985696|gb|EGD46532.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
          Length = 244

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    I++ R+   +IIA ++   +G  +      +  + P   L    P     P+++
Sbjct: 49  MLLHISISLCRIFAGVIIALLLGSLIGYKMAVSDIWNKILNPLVFLTYPIPKTALLPIIM 108

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +       +  + +++++IF     I+  V    +    +      S   +  +   ++I
Sbjct: 109 TIFGLGGASKIILITMIIIFQ----IIITVRDSVTRIDKECIYNVRSMGASQRQILYHVI 164

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P I P  +TG     G A +     E       +  + G+G YI ++  +  +  +  G
Sbjct: 165 IPDIIPGILTGLRVTIGTALSILFFCEA------YGTSWGMGYYILDAWTRIDYISMYKG 218

Query: 559 VLIMCCFVLAL 569
           +L++    +AL
Sbjct: 219 ILVLSVVGIAL 229



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 82/210 (39%), Gaps = 17/210 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           ++  + S +  R+ + ++I+LL   +     A S     +L P++ +   IP    L   
Sbjct: 48  AMLLHISISLCRIFAGVIIALLLGSLIGYKMAVSDIWNKILNPLVFLTYPIPKTALLPII 107

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F      K+I   +  IF I  +        +  S+  I ++     RS   S  Q 
Sbjct: 108 MTIFGLGGASKIILITMIIIFQIIIT--------VRDSVTRIDKECIYNVRSMGASQRQI 159

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +++ +P  +PG++  + +++      +   E            G+G YI  A    D +
Sbjct: 160 LYHVIIPDIIPGILTGLRVTIGTALSILFFCEAYG------TSWGMGYYILDAWTRIDYI 213

Query: 240 AILYAMLTMLGVIFLY---DQLLFRPMIVW 266
           ++   +L +  V         +L + ++ W
Sbjct: 214 SMYKGILVLSVVGIALFSSIDILEQKIVKW 243


>gi|330971803|gb|EGH71869.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 288

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 96/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +  +L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAALLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|290894091|ref|ZP_06557064.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL J2-071]
 gi|290556346|gb|EFD89887.1| glycine betaine/carnitine/choline ABC transporter [Listeria
           monocytogenes FSL J2-071]
          Length = 520

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|271970443|ref|YP_003344639.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270513618|gb|ACZ91896.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 291

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 77/217 (35%), Gaps = 9/217 (4%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYA 65
           L P I  R++P    +   + +   +             P ++V ++   L      +  
Sbjct: 31  LAPRIWGRVWPMALAVGMVLAIWQAVVWAGFWPDYVFAGPSEVVPVLADRLTSGEYWEAI 90

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R ++   +S+L   V   L ++ R L      ++  +Q++P + +    ++ F  
Sbjct: 91  GVTMRRAVTGFAVSVLVGLVLGALVSRIRVLRAAFGSLITGLQTMPSIAWFPLAILLFGL 150

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E A  F +      ++   +   +   P  L            Q + ++ +
Sbjct: 151 --------TESAITFVVILGAAPSIANGLIGGVDYTPPILLRAGHVLGFRRLQLYRHVIL 202

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           P S+P  +  +    +  W  ++A E++V+      L
Sbjct: 203 PASLPSFLAGLKQGWAFAWRSLMAGELVVIIAHQSSL 239



 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 76/247 (30%), Gaps = 10/247 (4%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +    R     R       + L     ++    + W             + +  + +  T
Sbjct: 23  LGGGTRGGLAPRIWGRVWPMALAVGMVLAIWQAVVWAGFWPDYVFAGPSEVVPVLADRLT 82

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +    I    +TM R V    ++ ++ + +G  +     + +        L   P+  
Sbjct: 83  SGEYWEAIG---VTMRRAVTGFAVSVLVGLVLGALVSRIRVLRAAFGSLITGLQTMPSIA 139

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +FPL +             ++ ++I G    I   +I G    P               +
Sbjct: 140 WFPLAILLFGLT----ESAITFVVILGAAPSIANGLIGGVDYTPPILLRAGHVLGFRRLQ 195

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +R++ILP   P ++ G       AW + +  E+          + LG  +    E    
Sbjct: 196 LYRHVILPASLPSFLAGLKQGWAFAWRSLMAGELVVI---IAHQSSLGERLYYDRELADS 252

Query: 553 PEVVLGV 559
             ++  +
Sbjct: 253 AGLLATM 259


>gi|326773279|ref|ZP_08232562.1| nitrate ABC transporter, permease protein [Actinomyces viscosus
           C505]
 gi|326636509|gb|EGE37412.1| nitrate ABC transporter, permease protein [Actinomyces viscosus
           C505]
          Length = 358

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 90/289 (31%), Gaps = 13/289 (4%)

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L RK +       +     + ++  +    R               + +         +
Sbjct: 68  DLLRKESTTPVAVLAGAWLTALIAWTLTARVRPASSAATSLTHFLPWINA---AGAWFIV 124

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +         +   + +   ++      D   ++     +    ++     S++    G+
Sbjct: 125 WQLTTSKLGLLTPPYFAAPEVLIASFLGDWRLLLSCLGASALLFIIGYTAGSVLGFFTGL 184

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+       + P  Q +   PA      ++              + ++ FG  + +  
Sbjct: 185 LMGWSRRADYWLHPLLQTIGPVPAAS----LLPLALLLLPTTYTSAAFIVGFGAWFPMAT 240

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              AG  +   D+ ++A +         R + +P   P  +TG  T  G +  A + +E+
Sbjct: 241 MTRAGVRSVRRDYIDMARTLGADELFLIRRVAVPSALPDMLTGLFTGLGTSLAALMTAEL 300

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                      GL  YI        +P + +G++I+  F   L   L+ 
Sbjct: 301 ------TGVDKGLAWYINWVKGWADYPRMYVGLIILVTFCRTLMVLLFK 343



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 78/248 (31%), Gaps = 17/248 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A+ +V  +    L  +         V I     D   L      + L  +       +  
Sbjct: 120 AWFIVWQLTTSKLGLLTPPYFAAPEVLIASFLGDWRLLLSCLGASALLFIIGYTAGSVLG 179

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           F    L   SRR    L P+L  +  +             + L    +     +A F + 
Sbjct: 180 FFTGLLMGWSRRADYWLHPLLQTIGPV--------PAASLLPLALLLLPTTYTSAAFIVG 231

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + M       + ++ RD  +++R+           + VP ++P ++  +   +   
Sbjct: 232 FGAWFPMATMTRAGVRSVRRDYIDMARTLGADELFLIRRVAVPSALPDMLTGLFTGLGTS 291

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP- 262
              ++ +E+  V        G+  YI       D   +   ++ ++        LLF+  
Sbjct: 292 LAALMTAELTGVDK------GLAWYINWVKGWADYPRMYVGLIILVTFCRTLMVLLFKIR 345

Query: 263 --MIVWSN 268
             ++ W  
Sbjct: 346 SSLLAWQQ 353


>gi|111225127|ref|YP_715921.1| putative ABC transporter transmembrane subunit [Frankia alni
           ACN14a]
 gi|111152659|emb|CAJ64400.1| putative ABC transporter transmembrane subunit [Frankia alni
           ACN14a]
          Length = 357

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 98/243 (40%), Gaps = 12/243 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
            +P I  L+ F+L+  ++             P   +      L         +RT +R L
Sbjct: 54  TWPKIGALVLFLLLWQVVVWSGWKPSYVLPGPGKALSEFGSRLGTSHFWDALARTLVRAL 113

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++++   V     ++S  L   +   +  +Q++P + +    ++ F          
Sbjct: 114 EGYALAVVIGVVVGVAVSRSTILRTAVGSFITALQTMPSIVWFPLAILLFKL-------- 165

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +E A  F +      ++   +   +  +P  L  V RS    G+  + Y+  P ++P ++
Sbjct: 166 SESAITFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGARGFSLYRYVVAPAALPSVL 225

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +    +  W  ++A E++V+   V   P +G+ +  + +  D + ++ +M+T+  +  
Sbjct: 226 AGLKQGWAFAWRSLMAGELLVI---VPGHPSVGADLQNSRELLDTVGVMASMITIFVIGV 282

Query: 254 LYD 256
           + D
Sbjct: 283 IVD 285



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 14/255 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI------VNHFTYQDV 376
           I       F           +  +  F ++  V +   W+    +      ++ F  +  
Sbjct: 38  IPTAQRRPFAARAWAATWPKIGALVLFLLLWQVVVWSGWKPSYVLPGPGKALSEFGSRLG 97

Query: 377 LYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
               W     T+ R +    +A +I + VG+ +     + + +  F   L   P+ V+FP
Sbjct: 98  TSHFWDALARTLVRALEGYALAVVIGVVVGVAVSRSTILRTAVGSFITALQTMPSIVWFP 157

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +             ++ +++ G    +   VI G    P     V  S    G+  +R
Sbjct: 158 LAILLFKLS----ESAITFVVVLGAAPSVANGVIYGVDYVPPLLVRVGRSMGARGFSLYR 213

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y++ P   P  + G       AW + +  E+      H      GA +  S E      V
Sbjct: 214 YVVAPAALPSVLAGLKQGWAFAWRSLMAGELLVIVPGHPSV---GADLQNSRELLDTVGV 270

Query: 556 VLGVLIMCCFVLALN 570
           +  ++ +    + ++
Sbjct: 271 MASMITIFVIGVIVD 285


>gi|116872855|ref|YP_849636.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116741733|emb|CAK20857.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 504

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|309388777|gb|ADO76657.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 250

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 101/255 (39%), Gaps = 15/255 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           + F  L     + + +       +   ++G  +Q++  IV   +            IT+ 
Sbjct: 7   KPFWLLLLLILLIWEISAAGLNSLTLPSVGETYQALSEIVLSGSLSHSF------LITLK 60

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           R ++   +A ++ I + + +     ++  ++P   ++ A P  ++  L V       ++ 
Sbjct: 61  RTLIAYTLAVLVGITLALLLHRFQLLAKTLRPLITIIQATPPVLWVSLAVVWFG---VSA 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +L    L+   +   I  N+         D  E+A ++    ++  + I LP + P  V+
Sbjct: 118 DLTPIFLIFIVSVPVIFVNIFQALEEMNTDLIEMAHAYSTPSFKILKEIYLPALLPALVS 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   AW +S+ +E  +       ++G+G  ++ +    +  ++    +I+  F+L 
Sbjct: 178 ALSIAFAFAWKSSVFAEFIA------SSSGIGYQLSRANAMLATDKLFAWAIILISFMLL 231

Query: 569 LNRFLWHPLYLYGTR 583
           +       L  Y +R
Sbjct: 232 VEYLFLEKLKSYVSR 246



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 94/213 (44%), Gaps = 13/213 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T  R L A  +++L     A L  + + L   L P++ I+Q+ P + +++ 
Sbjct: 49  GSLSHSFLITLKRTLIAYTLAVLVGITLALLLHRFQLLAKTLRPLITIIQATPPVLWVSL 108

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            VV+F        + A+L  IF IF   V  +  +++Q+L  +  DL E++ ++    ++
Sbjct: 109 AVVWFG-------VSADLTPIFLIFIVSVPVIFVNIFQALEEMNTDLIEMAHAYSTPSFK 161

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P  +P LV  + ++ +  W   V +E I          GIG  ++ A      
Sbjct: 162 ILKEIYLPALLPALVSALSIAFAFAWKSSVFAEFIASSS------GIGYQLSRANAMLAT 215

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             +    + ++  + L + L    +  + ++++
Sbjct: 216 DKLFAWAIILISFMLLVEYLFLEKLKSYVSRWK 248


>gi|218133139|ref|ZP_03461943.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992012|gb|EEC58016.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+      A +  +  G+  G+   +     P    + A P   F  LV+      +
Sbjct: 14  SLIRIFAGYTAAFVTAVLAGLAAGYVRAVRIMSAPLISAMQALPVTAFIILVLMIAGAKN 73

Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                 +S ++ F   + +++  ++ G      +  ++A  F+I G R +RYI L    P
Sbjct: 74  ------VSAVIAFIVVFPVVYHGMVQGIDNMDKNLAQMADVFNIHGMRRFRYISLMQCMP 127

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  T   ++ G  W A   +EV       L    +G  +  +        ++   +I+  
Sbjct: 128 YIRTAVKSSAGMCWKAGAAAEVIG-----LTRNSIGEQMYLAKLYLETDVLLSWGIIIII 182

Query: 565 FVLALNRFL 573
             +   + L
Sbjct: 183 ASVVFEKLL 191



 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 82/196 (41%), Gaps = 14/196 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+ +    + +   +    A   R + ++  P++  MQ++P+  F+   ++   
Sbjct: 11  TMHSLIRIFAGYTAAFVTAVLAGLAAGYVRAVRIMSAPLISAMQALPVTAFIILVLM--- 67

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 + GA+  +    F      +   M Q + N+ ++L +++  F + G ++F Y+ 
Sbjct: 68  ------IAGAKNVSAVIAFIVVFPVVYHGMVQGIDNMDKNLAQMADVFNIHGMRRFRYIS 121

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +   MP +   +  S    W    A+E+I +         IG  + LA    +   +L  
Sbjct: 122 LMQCMPYIRTAVKSSAGMCWKAGAAAEVIGLTRNS-----IGEQMYLAKLYLETDVLLSW 176

Query: 245 MLTMLGVIFLYDQLLF 260
            + ++    ++++LL 
Sbjct: 177 GIIIIIASVVFEKLLL 192


>gi|209516867|ref|ZP_03265717.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209502683|gb|EEA02689.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 292

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 94/241 (39%), Gaps = 12/241 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           L+AFVL+            +  +P     +      +    L    + +   +L   ++ 
Sbjct: 47  LIAFVLIAAWEIAARVINNDLLLPTFGATLTAFVQGVWSGELLVKTAVSMSVLLRGYLLG 106

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               FV  +LA  +R    +L  +  +   +P +  L   +++F             + +
Sbjct: 107 AALAFVLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPLALLWFGLGTG--------SLL 158

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  + +W +  + Y    ++P  L+   R++ L+G +    + VP ++P ++  + + 
Sbjct: 159 FVLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALPSILAGLRVG 218

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  W  ++A+E++    +       G YI     E     +   +  ++ +  L + L+
Sbjct: 219 WAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLVEHLV 276

Query: 260 F 260
           F
Sbjct: 277 F 277



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 79/254 (31%), Gaps = 7/254 (2%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRV 390
                   ++++L   W      +   +   + G  +  F        ++    ++M  +
Sbjct: 40  HGWLRKTLIAFVLIAAWEIAARVINNDLLLPTFGATLTAFVQGVWSGELLVKTAVSMSVL 99

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   ++ + +   +             +     +    P+    PL +        +   
Sbjct: 100 LRGYLLGAALAFVLTSLAVSTRVGRDLLSMLTAMFNPLPSIALLPLALLWFGLGTGS--- 156

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L  +++    W +  N  +G  + P   K    ++ +TG R    I++P   P  + G 
Sbjct: 157 -LLFVLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALPSILAGL 215

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 AW   I +E+             G YI ++  +     V  G+  +    L + 
Sbjct: 216 RVGWAFAWRTLIAAELVFGASSGSGGL--GWYIFQNRNELYTDRVFAGLAAVIVIGLLVE 273

Query: 571 RFLWHPLYLYGTRC 584
             ++  L     R 
Sbjct: 274 HLVFDTLERVTVRR 287


>gi|85704603|ref|ZP_01035705.1| hypothetical protein ROS217_05974 [Roseovarius sp. 217]
 gi|85671011|gb|EAQ25870.1| hypothetical protein ROS217_05974 [Roseovarius sp. 217]
          Length = 249

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +      T++  +    +  II + +G+ IG          P     ++ P   
Sbjct: 39  WTRFPVLWPHILQTLYSTLTGFTLGVIIGVSIGVMIGTSRVAYGVAYPLLVGFSSIPKVA 98

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ V               L  +    + I+ N+  G +    D ++V  +   +   
Sbjct: 99  VVPIFVLWFGSGTT----PAILTAMVICVFPIVVNISTGLATTEPDLEDVLKTLGASKRE 154

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   PY+      A   ++  +++SE  +         G+G  +  ++     
Sbjct: 155 ILWNVGLPRTMPYFFASLKVAITLSFVGAVLSETVA------SNRGIGNVMMTASSNFQV 208

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V  G++++    +AL  F 
Sbjct: 209 SLVFAGLIVLALMGVALYAFF 229



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 96/251 (38%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F L+   + ILL  + +  +PR    +V +      L  +  +T    L+   + ++
Sbjct: 7   IVGFFLMWEGLCILL-NVSDLILPRPSEILVTLWTRFPVLWPHILQTLYSTLTGFTLGVI 65

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   SR    V  P+L    SIP +  +   V++F +            AI  
Sbjct: 66  IGVSIGVMIGTSRVAYGVAYPLLVGFSSIPKVAVVPIFVLWFGSG--------TTPAILT 117

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                V+ +  ++   L     DLE+V ++   S  +  W +G+P +MP    ++ ++++
Sbjct: 118 AMVICVFPIVVNISTGLATTEPDLEDVLKTLGASKREILWNVGLPRTMPYFFASLKVAIT 177

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             +   V SE +          GIG+ +  A     +  +   ++ +  +          
Sbjct: 178 LSFVGAVLSETVASN------RGIGNVMMTASSNFQVSLVFAGLIVLALMGVALYAFFSF 231

Query: 259 LFRPMIVWSNK 269
           L   +  W+ +
Sbjct: 232 LESRVTGWATR 242


>gi|311696049|gb|ADP98922.1| binding-protein-dependent transport systems inner membrane
           component [marine bacterium HP15]
          Length = 269

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 18/236 (7%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+++ T   D +           L  Q  + +  R+   + I+     V   L    
Sbjct: 42  LLPGLEQMTAAVDRMAFQEDRRSGDYLMWQDTTASLARLGMGVGIAASLALVVGILNGVL 101

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             +   L P++  +  +P L  L    + F           EL+ +  I       M   
Sbjct: 102 PLVRANLAPLVSALSMVPPLAILPILFIVFGLG--------ELSKVMLIVIGTAPIMMRD 153

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q +  +P +     ++   + WQ    + +P  +P L+  + +S+   W F++A+E I
Sbjct: 154 VAQRVRELPGEQLIKIQTLGANSWQVITRMALPQVLPRLIDAVRLSLGPAWLFLIAAEAI 213

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
                     G+G  I L  +   +  IL  ++ +  +  + DQ L    R +  W
Sbjct: 214 A------STEGLGYRIFLVRRYLAMDVILPYVIWITILAIVIDQCLRLANRRLFPW 263



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 75/199 (37%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ + + IA+ + + VGI  G  P + + + P    L+  P     P++       
Sbjct: 75  ASLARLGMGVGIAASLALVVGILNGVLPLVRANLAPLVSALSMVPPLAILPILFIVFGLG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      +L++ GT   ++ +V       P +      +     W+    + LP + P
Sbjct: 135 ELSK----VMLIVIGTAPIMMRDVAQRVRELPGEQLIKIQTLGANSWQVITRMALPQVLP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +     + G AW   I +E  +       T GLG  I       +   ++  V+ +  
Sbjct: 191 RLIDAVRLSLGPAWLFLIAAEAIA------STEGLGYRIFLVRRYLAMDVILPYVIWITI 244

Query: 565 FVLALN---RFLWHPLYLY 580
             + ++   R     L+ +
Sbjct: 245 LAIVIDQCLRLANRRLFPW 263


>gi|221632619|ref|YP_002521840.1| ABC transporter permease [Thermomicrobium roseum DSM 5159]
 gi|221155738|gb|ACM04865.1| ABC transporter, permease protein [Thermomicrobium roseum DSM 5159]
          Length = 252

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            +D   +++   +TM  + + +I++ ++ I + I I     I   + P      A P   
Sbjct: 44  LRDYRLLLFHLSVTMQEIGLGLIVSIVLAIVLAIGIVASRLIERSVYPLVVASQAIPIVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL++    Y          ++++    + I  N++ G     ++  ++  S   + W+
Sbjct: 104 LAPLLLIWFGYGLTPK----VIVVVLICFFPIAVNMVDGLRGVDHELIDMVRSLGASKWQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ LP   P + +G   A   +   +++ E          + GLG  +  +  +   
Sbjct: 160 TLRFVRLPAALPAFFSGLRVAAAVSVIGALIGEWIG------ASAGLGYLMIRAAAQFHT 213

Query: 553 PEVVLGVLIMCCFVLAL 569
             V   VL+     +AL
Sbjct: 214 DRVFAAVLVSALVSIAL 230



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 19/263 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P++  LL   L    +   +  + +  +P     +  +  D   L  + S T   + 
Sbjct: 5   RVLPSL--LLITALFAWELACRVFAVPDWVLPPPSAILAALLRDYRLLLFHLSVTMQEIG 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++S++   V A     SR +   + P++   Q+IPI+      +++F      KVI 
Sbjct: 63  LGLIVSIVLAIVLAIGIVASRLIERSVYPLVVASQAIPIVALAPLLLIWFGYGLTPKVIV 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L   F         +  +M   L  +  +L ++ RS   S WQ   ++ +P ++P   
Sbjct: 123 VVLICFF--------PIAVNMVDGLRGVDHELIDMVRSLGASKWQTLRFVRLPAALPAFF 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-- 251
             + ++ +      V+    ++G+ +    G+G  +  A  +     +  A+L    V  
Sbjct: 175 SGLRVAAA------VSVIGALIGEWIGASAGLGYLMIRAAAQFHTDRVFAAVLVSALVSI 228

Query: 252 -IFLYDQLLFRPMIVWSNKFRLE 273
            +F     L R  + W  + R E
Sbjct: 229 ALFASVTWLERQTLPWRTRPRTE 251


>gi|32474748|ref|NP_867742.1| ABC transporter permease [Rhodopirellula baltica SH 1]
 gi|32445287|emb|CAD75289.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1]
          Length = 271

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 6/247 (2%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           IR +  E      +   V+ +    W  VV    +        + V    +Q    ++  
Sbjct: 12  IRGNRCEWAWTAFAVIMVAALGIAAWHFVVKLFDLPKLLLPTPWQVAEAGWQHRDVLLKS 71

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G IT++   V + +A II   V I       +   + P+   L   P     PL+V    
Sbjct: 72  GWITLWTATVSLFVAVIIGGSVSILFSQSRLLRRALFPYVVFLQTVPIVAIAPLLVIWSG 131

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y      +   ++      + I+ NV  G ++   +  ++   +  T W+    + +P  
Sbjct: 132 YEFRTAVIATVII----CLFPIVNNVTTGLTSVRPEHNDLLRMYGATRWQRLCRVQIPTA 187

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ V GA  + G A   +IV+E       +    GLGA +     +     ++  + + 
Sbjct: 188 IPFLVLGARISSGLAVIGAIVAEFFVSNGANYE--GLGAVMTGWQARTMTDALMAALAVS 245

Query: 563 CCFVLAL 569
               L L
Sbjct: 246 TLLGLIL 252



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 93/254 (36%), Gaps = 22/254 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----------L 61
           S+ I  N  +       + ++  L        V    +  + +                L
Sbjct: 9   SKSIRGNRCEWAWTAFAVIMVAALGIAAWHFVVKLFDLPKLLLPTPWQVAEAGWQHRDVL 68

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T      ++ ++++     + L ++SR L   L P +  +Q++PI+      V+
Sbjct: 69  LKSGWITLWTATVSLFVAVIIGGSVSILFSQSRLLRRALFPYVVFLQTVPIVAIAPLLVI 128

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +          A+ A     ++ +  ++   L ++  +  ++ R +  + WQ+  
Sbjct: 129 WSGYEFR--------TAVIATVIICLFPIVNNVTTGLTSVRPEHNDLLRMYGATRWQRLC 180

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLL 239
            + +P ++P LV    +S        + +E  V         G+G+ +    A    D L
Sbjct: 181 RVQIPTAIPFLVLGARISSGLAVIGAIVAEFFVSNGANYE--GLGAVMTGWQARTMTDAL 238

Query: 240 AILYAMLTMLGVIF 253
               A+ T+LG+I 
Sbjct: 239 MAALAVSTLLGLIL 252


>gi|187479061|ref|YP_787086.1| ABC transporter permease [Bordetella avium 197N]
 gi|115423648|emb|CAJ50193.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 258

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 11/247 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--CIT 386
           +             +L + W   V    +                Q +     LG    +
Sbjct: 8   KRDFGRWLPLIGPLVLFVVWDLTVRLALVSPVLLPTPVATITALLQGMAGGPLLGDFAAS 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           + R +   ++A++I +P+G+ +G    +   ++       + P++   PL +       +
Sbjct: 68  VSRTLQAFVLAAVIGVPLGVLLGSNERLYRSVEFLIDFFRSTPSSALIPLFLMIFGVTDM 127

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           N     +    F     ILFN   G           A     + WR ++ ++L     Y 
Sbjct: 128 NKVAIAA----FAALLVILFNSAYGVINARKQRVMAARVMGASRWRIFKDVLLWESLQYT 183

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G       A    IV+E+           GLG  I  + +  +  ++   +L      
Sbjct: 184 FVGLRGGISMALVIVIVAEMFIGAE-----NGLGNRIINAQQVLNVRDMYAAILAAGALG 238

Query: 567 LALNRFL 573
            ALN   
Sbjct: 239 YALNILF 245



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P I  L+ FV+    + + L        P   +  +   +    L    + +  R L
Sbjct: 13  RWLPLIGPLVLFVVWDLTVRLALVSPVLLPTPVATITALLQGMAGGPLLGDFAASVSRTL 72

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A V++ +       L   + RL   +  ++D  +S P    +   ++ F      KV  
Sbjct: 73  QAFVLAAVIGVPLGVLLGSNERLYRSVEFLIDFFRSTPSSALIPLFLMIFGVTDMNKVAI 132

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A  AA+  I         F+    + N  +     +R    S W+ F  + +  S+    
Sbjct: 133 AAFAALLVI--------LFNSAYGVINARKQRVMAARVMGASRWRIFKDVLLWESLQYTF 184

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +   +S     V+ +EM +  +      G+G+ I  A +  ++  +  A+L    + +
Sbjct: 185 VGLRGGISMALVIVIVAEMFIGAEN-----GLGNRIINAQQVLNVRDMYAAILAAGALGY 239

Query: 254 LYDQLLF---RPMIVWSNK 269
             + L     + ++ WS +
Sbjct: 240 ALNILFLVIEKSVVHWSGR 258


>gi|294782447|ref|ZP_06747773.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
 gi|294481088|gb|EFG28863.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA]
          Length = 257

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + + F  + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLALGIFFACLLAIIMDSFEMINKIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIIISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  ++L +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHLKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +       + I +     I+  + P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLALGIFFACLLAIIMDSFEMINKIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIIISILDGFRHCDKDAIQLLKLMNASRWQILYHLKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|317121602|ref|YP_004101605.1| binding-protein-dependent transporters inner membrane component
           [Thermaerobacter marianensis DSM 12885]
 gi|315591582|gb|ADU50878.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter marianensis DSM 12885]
          Length = 297

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A +T   +L+A V+++         A++S  L  VL P+LD+MQ++P    L   V+
Sbjct: 90  WEAAMQTLALVLAATVVAVAIGIPAGIAASRSPVLRAVLRPVLDLMQTLPAFVHLLPAVL 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F     G V G     +FA+  +            +  +P D+ E  R+F  +  Q   
Sbjct: 150 FFGA---GVVPGLLATVVFAVPPA-----IRLTDLGIRQVPADVVEAGRAFGSTPNQILR 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +   +      VV + M          PG+G+ +   +   D+   
Sbjct: 202 KIQLPLALPTIMAGVNQVIMLALSMVVIAGMA-------GAPGLGAEVVRGLTALDIPLG 254

Query: 242 LYAMLTMLGVIFLYDQL 258
           + + L ++ +    D++
Sbjct: 255 VESGLAVVLLAVYLDRI 271



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 77/227 (33%), Gaps = 16/227 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVG 405
           VV  V  G+AW   G     FT    + +  +G       T+  V+   ++A  I IP G
Sbjct: 56  VVIAVLAGLAWWLRGRGFGLFTAAAFVLIWAMGEWEAAMQTLALVLAATVVAVAIGIPAG 115

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I     P + + ++P   L+   PA V     V       +   L   +          +
Sbjct: 116 IAASRSPVLRAVLRPVLDLMQTLPAFVHLLPAVLFFGAGVVPGLLATVVF----AVPPAI 171

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P D  E   +F  T  +  R I LP   P  + G       A +  +++ 
Sbjct: 172 RLTDLGIRQVPADVVEAGRAFGSTPNQILRKIQLPLALPTIMAGVNQVIMLALSMVVIAG 231

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +A          GLGA +         P  V   L +    + L+R 
Sbjct: 232 MAG-------APGLGAEVVRGLTALDIPLGVESGLAVVLLAVYLDRI 271


>gi|281411706|ref|YP_003345785.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
 gi|281372809|gb|ADA66371.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
          Length = 250

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              LV  ++      + +  +P+    +  +      L  ++  T    LS + I L+  
Sbjct: 11  WIFLVATLVVWEFSNVPQYLLPKPSSIVSQMISQWRILLVHSLYTIAESLSGLAIGLVIG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L    + +  +L P+L + Q+IPI+      V++F      K        +  + 
Sbjct: 71  VGLAVLIDTFQFIREILYPVLIVSQAIPIVAVAPLVVIWFGLGIGTK--------VGVVA 122

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +  +    I  D  ++ R  + +  Q + YL +P ++P +   + +S    
Sbjct: 123 FVTLFPVALNTLEGFRTIDPDALDLFRVMKATRTQIYRYLIIPHTLPYVFSGLKIS---A 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLF 260
            + VV++   V+G+ +    G+G Y+  A+       +  +++ ++ +   +F    LL 
Sbjct: 180 TYAVVSA---VIGEWLGAEKGLGIYMIRAMNTFRADRLFVSIVIVVILSVAVFKMVDLLS 236

Query: 261 RPMIVW 266
           R    W
Sbjct: 237 RRFTPW 242



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 19/246 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           W  +V  + +        Y++   +            ++     T+   +  + I  +I 
Sbjct: 11  WIFLVATLVVWEFSNVPQYLLPKPSSIVSQMISQWRILLVHSLYTIAESLSGLAIGLVIG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + I     I   + P   +  A P     PLVV                ++ F T 
Sbjct: 71  VGLAVLIDTFQFIREILYPVLIVSQAIPIVAVAPLVVIWFGLGIGTKVG----VVAFVTL 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N + G      D  ++      T  + +RY+I+P   PY  +G   +   A  ++
Sbjct: 127 FPVALNTLEGFRTIDPDALDLFRVMKATRTQIYRYLIIPHTLPYVFSGLKISATYAVVSA 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---VLALNRFLWHPLY 578
           ++ E            GLG Y+  +        + + ++I+      V  +   L     
Sbjct: 187 VIGEWLGAEK------GLGIYMIRAMNTFRADRLFVSIVIVVILSVAVFKMVDLLSRRFT 240

Query: 579 LYGTRC 584
            +    
Sbjct: 241 PWFEER 246


>gi|239817721|ref|YP_002946631.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239804298|gb|ACS21365.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 267

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 90/251 (35%), Gaps = 6/251 (2%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
                     ++     +  +L   W  +V  + +        +++      D   +   
Sbjct: 4   PPLLSQPRVQRVLYPLLIGVVLVALWQWMVVAMELPPYLVPSPFLMVQTLVTDWAPLGSA 63

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   ++  ++A++  + +         I + + P+A LL   P     PL++  V 
Sbjct: 64  LLVTLKITLLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVK 123

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               NP   +++       + I+ N   G  +   D +        T W+    + +P  
Sbjct: 124 ----NPVAAMTVCAALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSA 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY+  G   + G A   ++V+E  +         GL   I ++  + + P +   +L++
Sbjct: 180 LPYFFGGLRISSGLALIGAVVAEFVAG--TGGSGAGLAYQILQAGFQLNIPRMFAALLLI 237

Query: 563 CCFVLALNRFL 573
               +AL   +
Sbjct: 238 SLTGVALFVLM 248



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 92/249 (36%), Gaps = 17/249 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQ-------ETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
                + + L+IG++ + L              VP   + +  +  D   L      T  
Sbjct: 10  PRVQRVLYPLLIGVVLVALWQWMVVAMELPPYLVPSPFLMVQTLVTDWAPLGSALLVTLK 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L + +++ +   + + L  +S+R+   L P   ++Q  PI+      +++  N     
Sbjct: 70  ITLLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAAM 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            + A L A+F I +        +    L +I  DL+   +  R + WQ+   L +P ++P
Sbjct: 130 TVCAALVALFPIIS--------NTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALP 181

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                + +S        V +E +          G+   I  A  + ++  +  A+L +  
Sbjct: 182 YFFGGLRISSGLALIGAVVAEFVAGTGGSGA--GLAYQILQAGFQLNIPRMFAALLLISL 239

Query: 251 VIFLYDQLL 259
                  L+
Sbjct: 240 TGVALFVLM 248


>gi|207723148|ref|YP_002253547.1| cog0600, abc-type nitrate/sulfonate/bicarbonate transport system,
           permease component protein [Ralstonia solanacearum
           MolK2]
 gi|206588342|emb|CAQ35305.1| cog0600, abc-type nitrate/sulfonate/bicarbonate transport system,
           permease component protein [Ralstonia solanacearum
           MolK2]
          Length = 263

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+   I +   +  G+W+   P  S+ + P+ +   + P  +  P+       
Sbjct: 64  GVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVWFGL 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A     +  +  R++ LP   
Sbjct: 124 GIWSKVALAVTLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSAT 179

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A+  ++V E            G+G  I ++        V  G++++ 
Sbjct: 180 SWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLT 233

Query: 564 CFVLALN---RFLWHPLYLYGTR 583
            F L L+     +   L  +  R
Sbjct: 234 VFALVLDWLVGLVEKRLMRWQPR 256



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A  I            A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVW 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 121 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 173 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 226

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             ++ +     + D L+    + ++ W  +
Sbjct: 227 AGIVVLTVFALVLDWLVGLVEKRLMRWQPR 256


>gi|323343018|ref|ZP_08083249.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463082|gb|EFY08277.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 263

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 20/234 (8%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ----------DVLYVIWLGCITMFRVVVLIIIASI 399
            ++  + +     S+G I                 D   +++    T+    + +    +
Sbjct: 16  AILGLLVLWQGLSSLGVIPRFMLPAPSDVVKAFNNDFSLLMYHARTTLLEAFLGLTFGVL 75

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +     + +           P   L    P     PL+V  + Y  L        L+I  
Sbjct: 76  LGFIFAVVMDHVSWFHKMFYPLIILTQTIPTVALAPLLVLWMGYGLLPK----ITLIILT 131

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + I    + G  +   D   +  S     ++ +R+I  P   PY+ +G   +   +  
Sbjct: 132 SFFPITMGCMNGFQSCDKDALNLMKSMGANTFQTFRHIKFPHALPYFFSGLKISVSYSLI 191

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++V+E           +GLG Y+    +  SF ++   +  +    L L  F+
Sbjct: 192 GAVVAEWLGG------YSGLGVYMTRVRKSYSFDKMFAVIFFISFLSLVLMGFV 239



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 86/249 (34%), Gaps = 22/249 (8%)

Query: 22  LLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L  +++   ++ L    +     P D+V        +  L  +A  T L     +   +
Sbjct: 17  ILGLLVLWQGLSSLGVIPRFMLPAPSDVVKAFNNDFSL--LMYHARTTLLEAFLGLTFGV 74

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L  F++A +         +  P++ + Q+IP +      V++             L  I 
Sbjct: 75  LLGFIFAVVMDHVSWFHKMFYPLIILTQTIPTVALAPLLVLWMGYGL--------LPKIT 126

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +T        +  +D   + +S   + +Q F ++  P ++P     + +S+
Sbjct: 127 LIILTSFFPITMGCMNGFQSCDKDALNLMKSMGANTFQTFRHIKFPHALPYFFSGLKISV 186

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           S      V +E +          G+G Y+    K      +   +         +  L+ 
Sbjct: 187 SYSLIGAVVAEWLGG------YSGLGVYMTRVRKSYSFDKMFAVIF-----FISFLSLVL 235

Query: 261 RPMIVWSNK 269
              + W  K
Sbjct: 236 MGFVSWLQK 244


>gi|298245614|ref|ZP_06969420.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297553095|gb|EFH86960.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 272

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM   V+ + +A+++ + + + I     +   + P        P     PL++    +  
Sbjct: 64  TMVETVLGLALATVLGVAIAVAIDLSSWLRRALYPLLVASQTIPMVALAPLLLVWFGF-- 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +L++    + I      G  +   D   +  S   + W+    + LPG  P 
Sbjct: 122 --DILPKVILVVLYCFFPITVACADGLLSVDPDLVRLMRSMRASRWQILWLVRLPGAMPS 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E            GLG ++  S    +   V   ++I    
Sbjct: 180 FFSGLRIAATYSVTGAIIGEYVG------AEQGLGIFMQTSANAHAIVLVFAAIVITTVL 233

Query: 566 VLAL 569
            LAL
Sbjct: 234 SLAL 237



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 93/240 (38%), Gaps = 17/240 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + +    I  T VP     +  +      L  ++ +T +  +  + ++ +     A    
Sbjct: 28  VGVRAGRIDATLVPAPSAILAALENKRDVLLTHSIQTMVETVLGLALATVLGVAIAVAID 87

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S  L   L P+L   Q+IP++      +V+F            L  +  +     + +T
Sbjct: 88  LSSWLRRALYPLLVASQTIPMVALAPLLLVWFGFDI--------LPKVILVVLYCFFPIT 139

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L ++  DL  + RS R S WQ  W + +P +MP     + ++     + V  + 
Sbjct: 140 VACADGLLSVDPDLVRLMRSMRASRWQILWLVRLPGAMPSFFSGLRIA---ATYSVTGA- 195

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQLLFRPMIVWSN 268
             ++G+ V    G+G ++  +     ++ +  A++    +   +F    L+   ++ W  
Sbjct: 196 --IIGEYVGAEQGLGIFMQTSANAHAIVLVFAAIVITTVLSLALFALVSLVEHIVLPWQE 253


>gi|304394773|ref|ZP_07376671.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
 gi|303293072|gb|EFL87474.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
          Length = 276

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 84/230 (36%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+    + W   V  + +         ++     Q    +      T++  ++   +A +
Sbjct: 36  VTIGFLLVWEFSVWALDVAKFILPAPSVIFGAIVQYWPAIWSNSLQTLYTTLLGFGLAIV 95

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G+ IG+   + + + P      A P     P++V  +            +     
Sbjct: 96  FGLGLGLAIGWSKAVYAGLYPLMIGFNAIPKVAVVPILVIWMGIGTG----PAVVTAFLI 151

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + I+ NV  G +    + ++V  +   +       + +P   PY+      A   A+ 
Sbjct: 152 AFFPIVVNVATGLATIEPESEDVLRALGASKLDVMWKVGIPRSMPYFFGSLKIAITLAFV 211

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            S+++E  +        +GLG  +  +  + + P V  G++++    +A+
Sbjct: 212 GSVIAETIA------ANSGLGHLMLAAQSQFNVPLVFAGLVMLAIEGIAM 255



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 82/238 (34%), Gaps = 15/238 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
                + F+LV       L   +       ++    +      +   + +T    L    
Sbjct: 33  PWLVTIGFLLVWEFSVWALDVAKFILPAPSVIFGAIVQYWPA-IWSNSLQTLYTTLLGFG 91

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++F          S+ +   L P++    +IP +  +   V++               
Sbjct: 92  LAIVFGLGLGLAIGWSKAVYAGLYPLMIGFNAIPKVAVVPILVIWMGIGTGP-------- 143

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+   F    + +  ++   L  I  + E+V R+   S     W +G+P SMP    ++ 
Sbjct: 144 AVVTAFLIAFFPIVVNVATGLATIEPESEDVLRALGASKLDVMWKVGIPRSMPYFFGSLK 203

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++++  +   V +E I          G+G  +  A  + ++  +   ++ +       
Sbjct: 204 IAITLAFVGSVIAETIAANS------GLGHLMLAAQSQFNVPLVFAGLVMLAIEGIAM 255


>gi|296877218|ref|ZP_06901258.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 15912]
 gi|296431738|gb|EFH17545.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 15912]
          Length = 506

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 20/203 (9%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      +++   ++ +  I Q+IP +  L   + +             L 
Sbjct: 32  VAIFLTIPLAVYLNSHKKVANWVLQVAGIFQTIPSMALLGLFIPFMGIGI--------LP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAILAILFNL 196

Query: 258 LLFRPMIVWSNKFRLERTTGIYP 280
           +L      W  K +L      + 
Sbjct: 197 IL-----KWLEKAKLRTIVAAFA 214



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++     +++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAVYLNSHKKVANWVLQVAGIFQTIPSMALLGLFIPFMGIGILPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 92  AIF----PILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAILAILFNLIL 198


>gi|293570300|ref|ZP_06681369.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Enterococcus faecium E980]
 gi|291609707|gb|EFF38968.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Enterococcus faecium E980]
          Length = 512

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|209546597|ref|YP_002278515.1| ABC transporter permease [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537841|gb|ACI57775.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 299

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 19/250 (7%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  R + +     P    +L     + + L I    +V     G A   I   +    + 
Sbjct: 26  RAARPIDLPDSAGPRARRRLGPGPAIPFGLQIGPALLVLAWVAGSALGWIDPRILSAPWT 85

Query: 375 DVLYVIWLG---------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            V     L            +  R ++ + I  +I   + +  G      + I    Q+ 
Sbjct: 86  VVEAFARLLEQGRLQDNFLTSATRALLGLSIGLLIGTVLAVIAGLSRIGEALIDGPVQIK 145

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P     PL++             + L +I      I  +      +  + + E+A +
Sbjct: 146 RAIPTLALIPLLILWFGIGESMKVTTIVLAVIV----PIYIHTHNALRSIDSRYVELAET 201

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +    +   ++LPG  P ++ G   A    W + +V E  +       T+GLG  I  
Sbjct: 202 LRMRQKDFILQVVLPGALPGFLLGLRFAVTLCWVSLVVVEQIN------ATSGLGYMIDL 255

Query: 546 STEKGSFPEV 555
           +   G    +
Sbjct: 256 ARNYGQTDVI 265



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 25/269 (9%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--------TVPRDIVDIVPITLDVHS 60
           P   RR+ P         +   ++ +                + P  +V+     L+   
Sbjct: 39  PRARRRLGPGPAIPFGLQIGPALLVLAWVAGSALGWIDPRILSAPWTVVEAFARLLEQGR 98

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R L  + I LL   V A +A  SR    ++   + I ++IP L  +   +
Sbjct: 99  LQDNFLTSATRALLGLSIGLLIGTVLAVIAGLSRIGEALIDGPVQIKRAIPTLALIPLLI 158

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV    LA I  I+           + +L +I     E++ + R+      
Sbjct: 159 LWFGIGESMKVTTIVLAVIVPIY--------IHTHNALRSIDSRYVELAETLRMRQKDFI 210

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++PG +  +  +++  W  +V  E I          G+G  I LA        
Sbjct: 211 LQVVLPGALPGFLLGLRFAVTLCWVSLVVVEQI------NATSGLGYMIDLARNYGQTDV 264

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           IL  ++  + +  + D   +L+ R  + W
Sbjct: 265 ILVGLVVYVLLGLVSDGLVRLIERRALSW 293


>gi|83648076|ref|YP_436511.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83636119|gb|ABC32086.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 273

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 75/203 (36%), Gaps = 13/203 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + +++++ + +G+ +G    + S   P    +A  P     P++   +  
Sbjct: 81  LASLQRLAIGLALSTLVALIIGLNMGAFNGLYSLGNPILTFIAMIPPLALLPILFISLGI 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L        L+  G    +  ++     +FP +    A +   +       I+LP + 
Sbjct: 141 GELGK----VALIFIGVFPIMTRDMALSVRSFPREQVVKAKTLGASDLAVVYKILLPQMM 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T    + G AW   I SE  +       T GLG  I       S   ++  V+ + 
Sbjct: 197 PRLITALRLSIGSAWLFLIASEAIA------ATEGLGYRIFLVRRYLSMDVIIPYVIWIT 250

Query: 564 CFVLALN---RFLWHPLYLYGTR 583
                ++   R +    Y +  +
Sbjct: 251 LLGFLMDWALRLILKWRYKWYEQ 273



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+   + +S L   +          L  +  PIL  +  IP L  L    +   
Sbjct: 80  TLASLQRLAIGLALSTLVALIIGLNMGAFNGLYSLGNPILTFIAMIPPLALLPILFISLG 139

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL  +  IF      MT  M  S+ + PR+    +++   S     + + 
Sbjct: 140 IG--------ELGKVALIFIGVFPIMTRDMALSVRSFPREQVVKAKTLGASDLAVVYKIL 191

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  MP L+  + +S+   W F++ASE I          G+G  I L  +   +  I+  
Sbjct: 192 LPQMMPRLITALRLSIGSAWLFLIASEAIA------ATEGLGYRIFLVRRYLSMDVIIPY 245

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKF 270
           ++ +  + FL D  L R ++ W  K+
Sbjct: 246 VIWITLLGFLMDWAL-RLILKWRYKW 270


>gi|295110029|emb|CBL23982.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ruminococcus obeum A2-162]
          Length = 273

 Score = 89.6 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
            + P+       +  +     + W      +   I      +I+     Q      WL C
Sbjct: 11  ANAPKQEKNRVKSALIILFWLVVWEIADRVIDNRIILSGPVHIIASLAQQVQQADFWLIC 70

Query: 385 -ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +  R+ V  I++ +    + +       I   ++P   +L   P   F  +++  V  
Sbjct: 71  GASFLRIAVGFILSFVAGFLLALVCHRFKLIRDFLEPIIVMLKTVPMISFVIMLLIWVGN 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L   ++LS L++      I  N + G +       EVA  +H+  W+ + +I  P   
Sbjct: 131 QALT--IYLSFLIVLPI---IYTNTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFM 185

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ ++ +  A G +W + I++EV            +G  +  +       ++    +++ 
Sbjct: 186 PFVLSASKLALGMSWKSGIMAEVIGTPKPS-----IGREMYAAKSYLQTADLFAWTVVVV 240

Query: 564 CFVLALNRFL 573
              +   +  
Sbjct: 241 ILSVIFEKAF 250



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 102/234 (43%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L +++V  I + ++      + P  I+  +   +           + LR+    ++S +
Sbjct: 27  ILFWLVVWEIADRVIDNRIILSGPVHIIASLAQQVQQADFWLICGASFLRIAVGFILSFV 86

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A +  + + +   L PI+ +++++P++ F+   +++         +G +   I+ 
Sbjct: 87  AGFLLALVCHRFKLIRDFLEPIIVMLKTVPMISFVIMLLIW---------VGNQALTIYL 137

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  +  Q L N+   L EV++ + ++ W+KF ++  P  MP ++    +++ 
Sbjct: 138 SFLIVLPIIYTNTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFMPFVLSASKLALG 197

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             W   + +E+I       P P IG  +  A        +    + ++ +  ++
Sbjct: 198 MSWKSGIMAEVIGT-----PKPSIGREMYAAKSYLQTADLFAWTVVVVILSVIF 246


>gi|226360717|ref|YP_002778495.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239202|dbj|BAH49550.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 273

 Score = 89.6 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 88/229 (38%), Gaps = 14/229 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + + + GI+   +P  +  I        ++  +AS T    L    +SLL  +  A L  
Sbjct: 41  VYVTVSGIRPQVLPSPLRVIQQGWRARDAISGHASATLQVTLIGFAVSLLCAWALAVLVD 100

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S  L    VP+  + Q++PI+      +++F            L  +  I  +  + MT
Sbjct: 101 FSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGL--------LPKVLVIALATFFPMT 152

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             + +      R+   + RS   S WQ+F Y+ +P ++P     + + ++      V +E
Sbjct: 153 IGLIEGFAAADREAGALLRSMGASRWQEFRYVRLPSAIPRFFTALRIGITYAVVGAVFAE 212

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +          G+G Y+A          +L A+L    +      L F
Sbjct: 213 YVG------ATSGLGIYMATQKNSFRTDLVLAAVLVTAVISVSLYLLTF 255



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+   ++   ++ +    + + + F P +     P   +    P     PL++    
Sbjct: 74  ASATLQVTLIGFAVSLLCAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L       L++   T + +   +I G +A   +   +  S   + W+ +RY+ LP  
Sbjct: 134 FGLL----PKVLVIALATFFPMTIGLIEGFAAADREAGALLRSMGASRWQEFRYVRLPSA 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P + T        A   ++ +E          T+GLG Y+A          V+  VL+ 
Sbjct: 190 IPRFFTALRIGITYAVVGAVFAEYVG------ATSGLGIYMATQKNSFRTDLVLAAVLVT 243

Query: 563 CCFVLAL 569
               ++L
Sbjct: 244 AVISVSL 250


>gi|283797245|ref|ZP_06346398.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium sp.
           M62/1]
 gi|291075094|gb|EFE12458.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Clostridium sp.
           M62/1]
 gi|295092390|emb|CBK78497.1| Periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system (osmoprotectant binding
           protein) [Clostridium cf. saccharolyticum K10]
          Length = 526

 Score = 89.6 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 75/188 (39%), Gaps = 13/188 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T L    A+V ++L       L A  R     ++   +++Q++P +  L   +
Sbjct: 22  LVEHIELTVL----ALVAAILIGVPLGILIAYIRPASKPVLAFANVVQAVPSMALLGLAI 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F              AIF +    +  +  + Y  L NI   + E +    L+  Q  
Sbjct: 78  PVFGIGM--------KPAIFLVVIYSLLPIIKNTYAGLMNISDQMLEAAEGIGLTKSQIL 129

Query: 181 WYLGVPFSMPGLVWNMMMS-MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           + + +P ++P ++  + +S +S      +A+ +   G   +   GI +   + I    + 
Sbjct: 130 FKVRLPMALPVIMTGVRISAVSAVGLMTLAAYVGGGGLGYLVFSGIRTVSNVMILAGAIP 189

Query: 240 AILYAMLT 247
           A + A+L 
Sbjct: 190 ACILALLV 197



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 5/172 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++ A +I +P+GI I +    S  +  FA ++ A P+     L +            
Sbjct: 30  VLALVAAILIGVPLGILIAYIRPASKPVLAFANVVQAVPSMALLGLAIPVFGIG----MK 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L++  +   I+ N  AG     +   E A    +T  +    + LP   P  +TG 
Sbjct: 86  PAIFLVVIYSLLPIIKNTYAGLMNISDQMLEAAEGIGLTKSQILFKVRLPMALPVIMTGV 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRT-TGLGAYIAESTEKGSFPEVVLGVLI 561
             +   A     ++     G +     +G+          G+ P  +L +L+
Sbjct: 146 RISAVSAVGLMTLAAYVGGGGLGYLVFSGIRTVSNVMILAGAIPACILALLV 197


>gi|295706022|ref|YP_003599097.1| putative glycine/betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein Opu [Bacillus
           megaterium DSM 319]
 gi|294803681|gb|ADF40747.1| putative glycine/betaine/carnitine/choline ABC transporter,
           permease/substrate-binding protein Opu [Bacillus
           megaterium DSM 319]
          Length = 507

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   + L    A+VI++L +        +  R+   ++ +  ++Q+IP       
Sbjct: 17  QALLEHIQISVL----ALVIAVLISVPLGLYLTRHDRIAEPIIGVTAVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V      A+ A+F   +  +  + Y  +  +   L E S++  ++ W+
Sbjct: 67  --LALLGLLIPLVGIGTFPAVIALFLYSLLPIVRNTYTGIKEVDPSLIEASKAMGMNSWR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P ++P ++  +  +M           ++++G   I    IG+      I L I
Sbjct: 125 RLIKVELPLALPVIMAGIRTAM-----------VLIIGTATIVAL-IGAGGLGSLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D   IL   +    +  ++D +L
Sbjct: 173 DRSDNSLILLGAIPAALLALIFDGIL 198



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++IA +I +P+G+++     I+  I     +L   P+     L++  V         
Sbjct: 27  VLALVIAVLISVPLGLYLTRHDRIAEPIIGVTAVLQTIPSLALLGLLIPLVGIG----TF 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   I+ N   G         E + +  +  WR    + LP   P  + G 
Sbjct: 83  PAVIALFLYSLLPIVRNTYTGIKEVDPSLIEASKAMGMNSWRRLIKVELPLALPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + +  +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIIGTATIVALIGAGGLGSLIL-------LGIDRSDNSLILLGAIPAALLALIFD 195

Query: 571 RFL 573
             L
Sbjct: 196 GIL 198


>gi|255523551|ref|ZP_05390519.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|255512808|gb|EET89080.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
          Length = 243

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 103/237 (43%), Gaps = 14/237 (5%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           IG+  + +        P D++  +      ++L      +  R++   ++S++       
Sbjct: 9   IGVDVLSIWKPYTFPSPVDVIKSLYFLSIDNTLLIAVGASMERLMIGYLLSVIIGIPLGI 68

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + + +G  +  I+  +Q++P + +L F ++++          +E   IF I    ++
Sbjct: 69  LIVRYKYVGENIKSIILGLQTLPSICWLPFAILWYGL--------SEKTIIFVIAMGSIF 120

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            ++ +   ++ N+     + +++    G++ +  + +P S+P ++  +    S  W  ++
Sbjct: 121 AISIATEGAINNVYPLYIKAAKTMGAKGFKLYLNVVMPASLPSIIAGLKQGWSFAWRALM 180

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           A EM+V         G+G  + +     D+  +L  M+ ++ +  L D ++F  +  
Sbjct: 181 AGEMLV------ATKGLGQVLMIGRDLADISQVLAVMIVIIAIGLLLDNVVFGRIEA 231



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 80/209 (38%), Gaps = 10/209 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     +M R+++  +++ II IP+GI I    ++   I+     L   P+  + P  +
Sbjct: 41  LLIAVGASMERLMIGYLLSVIIGIPLGILIVRYKYVGENIKSIILGLQTLPSICWLPFAI 100

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  ++  G+ + I        +     + + A +    G++ +  ++
Sbjct: 101 LWYGLSEKT----IIFVIAMGSIFAISIATEGAINNVYPLYIKAAKTMGAKGFKLYLNVV 156

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  + G       AW A +  E+       + T GLG  +    +     +V+  
Sbjct: 157 MPASLPSIIAGLKQGWSFAWRALMAGEML------VATKGLGQVLMIGRDLADISQVLAV 210

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           ++++    L L+  ++  +     +   L
Sbjct: 211 MIVIIAIGLLLDNVVFGRIEASIRQKWGL 239


>gi|317403258|gb|EFV83777.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 339

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 87/284 (30%), Gaps = 17/284 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G++SW +          L   L +       +   + +  R    L      V      
Sbjct: 50  VGFTSWGYTREFGVAALVLAALLLLAAVAGAAHRRPVRALHRAGPWLLALAVAVGLWEVA 109

Query: 358 GIAWQSIGYI-------VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                 +          +      D   +      +++ +     + +      G+ IG+
Sbjct: 110 TAKLALLPSPFFAPPQSLIEVYVSDYKRLADSLANSLWLLANGFGLGAAAGFLTGVAIGW 169

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P  + L   P+    P+          +       L+   T + +     +
Sbjct: 170 SRGLGYWVHPVLRFLGPVPSTALLPMAFFFFP----SSWSAAVFLIALATWFPVTVLTWS 225

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G +     + +VA +   + W     + +P   P    G     G +++  + +E+    
Sbjct: 226 GVAGVNRAYYDVARTMGASEWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVAAEMMG-- 283

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                 +GLG Y++ +    S+  +   +++M      L   L+
Sbjct: 284 ----VKSGLGWYLSWAQGWASYANMYGALIVMALVFSGLITLLF 323



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 91/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           LLA  + +G+  +    +     P        I +   D   L    + +   + +   +
Sbjct: 96  LLALAVAVGLWEVATAKLALLPSPFFAPPQSLIEVYVSDYKRLADSLANSLWLLANGFGL 155

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                F+       SR LG  + P+L  +  +P    L     +F          +  AA
Sbjct: 156 GAAAGFLTGVAIGWSRGLGYWVHPVLRFLGPVPSTALLPMAFFFF--------PSSWSAA 207

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +T   +  +  + R   +V+R+   S W     + +P ++P +   + M
Sbjct: 208 VFLIALATWFPVTVLTWSGVAGVNRAYYDVARTMGASEWFLVLRVAIPAALPQVFVGLFM 267

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +VA+EM+ V        G+G Y++ A        +  A++ M  V      L
Sbjct: 268 GLGASFSVLVAAEMMGVKS------GLGWYLSWAQGWASYANMYGALIVMALVFSGLITL 321

Query: 259 LF 260
           LF
Sbjct: 322 LF 323


>gi|293377161|ref|ZP_06623369.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
 gi|292644181|gb|EFF62283.1| ABC transporter, substrate-binding protein, QAT family
           [Enterococcus faecium PC4.1]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|152996716|ref|YP_001341551.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150837640|gb|ABR71616.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 263

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 91/244 (37%), Gaps = 15/244 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R  P +F  +  VL+  ++    +           +      ++      +   T   
Sbjct: 15  ANRFAPGLF-FIGLVLLWELVCRFGNVPNYILPSPSAIFTAFFDVEFSRWLTHLWATLRV 73

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L    +S++     +    +S  +  VL P L ++QS P++      +V      P +V
Sbjct: 74  ALMGFALSIVIAIPLSIGMMRSELMNRVLYPALIVIQSTPVVAVAPLIIVLLGTDDPSRV 133

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   L   F         +  S    +   P ++ E+S+S R   +++ W + +P+++P 
Sbjct: 134 LITCLITFF--------PLVVSTTTGMLETPPEMIELSQSLRAPRYRETWQIRIPYAIPH 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +S++      V +E +   +      G+G +I  +     +      ++ +  +
Sbjct: 186 IFSGLRVSITLAIIGAVVAEFVAAEE------GLGYFIQFSTSFFKIPQAFAGLIFLSVI 239

Query: 252 IFLY 255
             L 
Sbjct: 240 SLLL 243



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   ++ +I IP+ I +     ++  + P   ++ + P     PL++  +   
Sbjct: 69  ATLRVALMGFALSIVIAIPLSIGMMRSELMNRVLYPALIVIQSTPVVAVAPLIIVLLG-- 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +    L+    T + ++ +   G    P +  E++ S     +R    I +P   P
Sbjct: 127 --TDDPSRVLITCLITFFPLVVSTTTGMLETPPEMIELSQSLRAPRYRETWQIRIPYAIP 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +G   +   A   ++V+E  +         GLG +I  ST     P+   G++ +  
Sbjct: 185 HIFSGLRVSITLAIIGAVVAEFVA------AEEGLGYFIQFSTSFFKIPQAFAGLIFLSV 238

Query: 565 FVLAL 569
             L L
Sbjct: 239 ISLLL 243


>gi|84685715|ref|ZP_01013612.1| hypothetical protein 1099457000253_RB2654_07079 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666381|gb|EAQ12854.1| hypothetical protein RB2654_07079 [Rhodobacterales bacterium
           HTCC2654]
          Length = 276

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 22/244 (9%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P  F L+A V V G       G  +T +   +       +D   L   + +T   +L 
Sbjct: 44  LLPPPFVLIALVAVAG----YALGGVKTAILAALCLAYCWVMD---LWDASMQTIALVLV 96

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ I++   F     AA+ RRL  V+ PILD MQ++P   +L   V+ F           
Sbjct: 97  AVTIAVGIAFPLGIYAARHRRLEAVVRPILDAMQTVPPWVYLIPAVIIFSLG-------- 148

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + A+ A     V  M      +   +P DL+E+ ++         + + +P + P LV 
Sbjct: 149 TVPAVIATIVYGVPPMLRLTTLAFRGVPTDLKELGQAIGAKPRTILFKIELPAATPTLVV 208

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          ++ S  +VV   ++   G+G+ +   +   ++   L A L ++ V  L
Sbjct: 209 GLNQ-------CILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEMGLGLRAGLAIVAVALL 261

Query: 255 YDQL 258
            D+L
Sbjct: 262 LDRL 265



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 62/214 (28%), Gaps = 4/214 (1%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +      F +P  + +      L  +     E  L       +     +    V     
Sbjct: 1   MMRLDPGAFLAPAVDWLNANFHPLFAVITDVIEAVLGGIEWLFLLPPPFVLIALVAVAGY 60

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
                ++         Y  V+ +      T+  V+V + IA  I  P+GI+      + +
Sbjct: 61  ALGGVKTAILAALCLAYCWVMDLWDASMQTIALVLVAVTIAVGIAFPLGIYAARHRRLEA 120

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P    +   P  V+    V   S   +   +   +  +      +L          P
Sbjct: 121 VVRPILDAMQTVPPWVYLIPAVIIFSLGTVPAVIATIVYGV----PPMLRLTTLAFRGVP 176

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            D KE+  +           I LP   P  V G 
Sbjct: 177 TDLKELGQAIGAKPRTILFKIELPAATPTLVVGL 210


>gi|319791731|ref|YP_004153371.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315594194|gb|ADU35260.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 289

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 92/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++  +     +              +   L    L +    +   +L   +  ++
Sbjct: 46  LIVIAVLWELAARWQNNDLLLPTFTATASALFDGLASGELIEKVRISLAVLLQGYLAGVV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F             + +F 
Sbjct: 106 LAFALTTLAVSTQIGRDLLDTLTSMFNPLPAIALLPLALLWFGLGRG--------SLVFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +P  L    R++ L G +    + VP ++P ++  + +  +
Sbjct: 158 LIHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQILVPAALPSILSGLKIGWA 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L F+
Sbjct: 218 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLAMVVLIGLLVESLGFK 275

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 276 TLERLTVR 283



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 87/277 (31%), Gaps = 16/277 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--WQSIGYIVNHFTYQD 375
           RTL        E  L L +       +      +V  V   +A  WQ+   ++  FT   
Sbjct: 14  RTLEPFTEVPLERTLPLPARIWAQAGVRKGLILIVIAVLWELAARWQNNDLLLPTFTATA 73

Query: 376 VLYVIWLGC--------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                 L          I++  ++   +   ++   +             +     +   
Sbjct: 74  SALFDGLASGELIEKVRISLAVLLQGYLAGVVLAFALTTLAVSTQIGRDLLDTLTSMFNP 133

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA    PL +        +    L  ++I    W +  N  AG    P   +    ++ 
Sbjct: 134 LPAIALLPLALLWFGLGRGS----LVFVLIHSVLWPLALNTYAGFQGVPETLRMAGRNYG 189

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + G R+   I++P   P  ++G       AW   I +E+           GLG YI ++ 
Sbjct: 190 LKGLRYVLQILVPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNR 247

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +     V  G+ ++    L +    +  L     R 
Sbjct: 248 NELYTDRVFAGLAMVVLIGLLVESLGFKTLERLTVRR 284


>gi|257898796|ref|ZP_05678449.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium Com15]
 gi|257836708|gb|EEV61782.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium Com15]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|81429479|ref|YP_396480.1| putative glycine/betaine/carnitine/choline ABC transporter,
           substrate binding and membrane-spanning subunits
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78611122|emb|CAI56175.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           substrate binding and membrane-spanning subunits
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 508

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 86/208 (41%), Gaps = 16/208 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +T     L Q   +     L A++I+ +     A +    ++L   ++ +  ++Q+IP  
Sbjct: 10  LTTQSGELLQALGQHLEISLLALLIAAVIGIPLAIILTAHQKLAEAMLQVTSVLQTIPS- 68

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                  +  + L    V    + A+  +    +  +  + Y  L  I   L+E   +F 
Sbjct: 69  -------LALLGLLIPLVGIGTVPAVITLVLYALMPIFQNTYAGLSGIDPALKEAEIAFG 121

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           L   ++   + +P +MP ++  + +++      ++ +  +     +I   G+G++I + I
Sbjct: 122 LPRAKRLLRIELPLAMPLIISGLRIAL----VMIIGTATLAA---LIGAGGLGTFILVGI 174

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +  +  A+L    T+  V+ L    L R
Sbjct: 175 QSNN-NALLVVGATLSAVLALVVSALIR 201



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 14/186 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IA++I IP+ I +     ++  +     +L   P+     L++  V    +   +
Sbjct: 29  LLALLIAAVIGIPLAIILTAHQKLAEAMLQVTSVLQTIPSLALLGLLIPLVGIGTVPAVI 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      I  N  AG S      KE   +F +   +    I LP   P  ++G 
Sbjct: 89  TLVLYALM----PIFQNTYAGLSGIDPALKEAEIAFGLPRAKRLLRIELPLAMPLIISGL 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG---VLIMCCFVL 567
             A       + ++ +   G       GLG +I    +  +   +V+G     ++   V 
Sbjct: 145 RIALVMIIGTATLAALIGAG-------GLGTFILVGIQSNNNALLVVGATLSAVLALVVS 197

Query: 568 ALNRFL 573
           AL R+L
Sbjct: 198 ALIRWL 203


>gi|302539017|ref|ZP_07291359.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. C]
 gi|302447912|gb|EFL19728.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces sp. C]
          Length = 640

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 70/491 (14%), Positives = 137/491 (27%), Gaps = 43/491 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
                     G++   L G +   V      +  +      +     +T   M  A++ S
Sbjct: 84  LGWAGVTAAAGLLAWRLAGTRLALVSVAAFAVCGL----LGMWVPTMQTLALMAVAVLAS 139

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L   +    A  S RL  VL P+LD MQ +P   +L   V+ F    P        AA+
Sbjct: 140 VLLGALLGLAAGLSDRLDRVLRPVLDTMQVLPAFAYLLPVVLVFGIGVP--------AAV 191

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A        M       L      + E + S   +G Q+     +P +   L+  +  +
Sbjct: 192 LATVVYAAPPMARLTALGLRGADPGVMEAAASLGATGRQRLLTARLPLARKELLLGVNQA 251

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +       V + +I  G       G+G  +  A+   D+ A L A + ++ +  + D++ 
Sbjct: 252 IMMALGMAVIASVIGAG-------GLGDRVYQALASVDVGAALAAGVPIVLLAVVLDRVT 304

Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
                   +                          +   G+ +     P +  V      
Sbjct: 305 AAAGARIGSAPAAGPAGRGRTPALASAVAVAVVAAVAAAGHLTGRLGWPRTWAVDTAGPV 364

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
              + +     +  +      +     F   V+  +  G+ W     ++       +L  
Sbjct: 365 NRAVDWMTAHLYSGVPVVGGTADWAARFTTGVLNPLRSGLQWLPWWSVLLAVGALALLIG 424

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIW--------------------IGFRPHISSKIQ 419
            W    T    +  I +  +    +                             +   ++
Sbjct: 425 TWRTAATAVLAMAAIGVLGVWGPALDTLSQVLAAVAATLLLGLALGAAAARGGRLDRVLR 484

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   +    P  V+   VV+              +  +             G  A     
Sbjct: 485 PVLDVFQTLPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI----TAQGLRAVDPGA 540

Query: 480 KEVASSFHITG 490
            E A S   TG
Sbjct: 541 MESARSLGATG 551



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 84/306 (27%), Gaps = 33/306 (10%)

Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325
           W      + +  +  A  W++          +      NF       V  L  TLG    
Sbjct: 30  WPGGLTADVSVPLDRAGDWIIDNRDDHPLFLYFLGHVSNFVVVSVRAVYLLLLTLGWAGV 89

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
                 L          ++ +  F V   + + +                          
Sbjct: 90  TAAAGLLAWRLAGTRLALVSVAAFAVCGLLGMWVP----------------------TMQ 127

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + V ++ + ++   +G+  G    +   ++P    +   PA  +   VV       
Sbjct: 128 TLALMAVAVLASVLLGALLGLAAGLSDRLDRVLRPVLDTMQVLPAFAYLLPVVLVFGIG- 186

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L  +      +      G         E A+S   TG +      LP     
Sbjct: 187 ---VPAAVLATVVYAAPPMARLTALGLRGADPGVMEAAASLGATGRQRLLTARLPLARKE 243

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A   A   ++++ V   G       GLG  + ++         +   + +   
Sbjct: 244 LLLGVNQAIMMALGMAVIASVIGAG-------GLGDRVYQALASVDVGAALAAGVPIVLL 296

Query: 566 VLALNR 571
            + L+R
Sbjct: 297 AVVLDR 302


>gi|91777725|ref|YP_552933.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91690385|gb|ABE33583.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 275

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 96/258 (37%), Gaps = 19/258 (7%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            L  +  P +   I   +  L      +G+++  +        P  ++           L
Sbjct: 22  RLATLREPLLRAAIPVLLIALWQLASTLGVVSEFV-----LPAPASVLTAYRELWQSGDL 76

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +  R    ++I      +    A  S+        +L ++++IP +  +   VV
Sbjct: 77  QDALKISLARAALGLLIGGGAGLLLGVAAGLSKSAERGFDTVLQMLRTIPFIALVPIFVV 136

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F           EL+ +  I  + +  M  S Y ++  I   L E+ R+FRL+   +  
Sbjct: 137 WFGIG--------ELSKVALIVGAAISPMYLSTYHAIRGIDPKLLELGRTFRLTRGHQIR 188

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++PG++  +  S +     +VA+E I          GIG  +  A + Q    I
Sbjct: 189 LIILPTALPGILVGVRYSAAISLLALVAAEQINASA------GIGFILNNANQFQRTDII 242

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +  +L    +    D LL
Sbjct: 243 IAGILVYAALGIAVDALL 260



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 10/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                       Q+L   P     P+ V       L+       L++      +  +   
Sbjct: 108 SKSAERGFDTVLQMLRTIPFIALVPIFVVWFGIGELSK----VALIVGAAISPMYLSTYH 163

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     E+  +F +T     R IILP   P  + G   +   +  A + +E  +  
Sbjct: 164 AIRGIDPKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQIN-- 221

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + G+G  +  + +      ++ G+L+     +A++  L
Sbjct: 222 ----ASAGIGFILNNANQFQRTDIIIAGILVYAALGIAVDALL 260


>gi|322388356|ref|ZP_08061960.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
 gi|321141028|gb|EFX36529.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
          Length = 506

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 20/203 (9%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ +  I Q+IP +  L   + +             L 
Sbjct: 32  VAIFLTIPLAVYLNGHKKAAAWVLQVAGIFQTIPSMALLGLFIPFMGIG--------TLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTITALNGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSALLAILFNI 196

Query: 258 LLFRPMIVWSNKFRLERTTGIYP 280
           +L      W  K +L      + 
Sbjct: 197 IL-----KWLEKAKLRTIVSTFA 214



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAVYLNGHKKAAAWVLQVAGIFQTIPSMALLGLFIPFMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 92  AIF----PILENTITALNGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSALLAILFNIIL 198


>gi|257080920|ref|ZP_05575281.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           E1Sol]
 gi|256988950|gb|EEU76252.1| ABC transporter membrane-spanning permease [Enterococcus faecalis
           E1Sol]
          Length = 505

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 27/203 (13%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L ++   +      +++ + L     A      R+L   L+ +  I Q+IP      
Sbjct: 16  LQALIEHMQLS----FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPS----- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    +      AI A+    ++ +  + Y  L  I   LEE + +F +S  
Sbjct: 67  ---LALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDLSLEEAAEAFGMSKK 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV----IPLPGIGSYIALAI 233
           +K +   +  ++P ++  +             + ++++G       I   G+G++I L I
Sbjct: 124 EKLFKFELQMALPFIISGIRT-----------ATVLIIGTATLAALIGAGGLGTFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
              +L  I    L+   +  L++
Sbjct: 173 DRNNLSLIFIGALSSAALAVLFN 195



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++ A++I IP+ I++     ++  +     +    P+      ++  +         
Sbjct: 27  FISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLA----LLGLLIPLIGIGRP 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++    + IL N   G +      +E A +F ++         L    P+ ++G 
Sbjct: 83  PAIVALVIYALFPILQNTYTGLTEIDLSLEEAAEAFGMSKKEKLFKFELQMALPFIISGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G       GLG +I    ++ +   + +G L      +  N
Sbjct: 143 RTATVLIIGTATLAALIGAG-------GLGTFILLGIDRNNLSLIFIGALSSAALAVLFN 195


>gi|237740469|ref|ZP_04570950.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 2_1_31]
 gi|229422486|gb|EEO37533.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 2_1_31]
          Length = 257

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + + F  + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLALGIFFACLLAIIMDSFEIINKIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIIISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  ++L +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHLKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +       + I +     I+  + P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLALGIFFACLLAIIMDSFEIINKIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIIISILDGFRHCDKDAIQLLKLMNASRWQILYHLKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|269218501|ref|ZP_06162355.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269211612|gb|EEZ77952.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 255

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 10/180 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            Y+      T+   ++   +A+ + +P+G  +      +  +QP+     A PA    PL
Sbjct: 51  GYLASAAWATLKEALLGASLAAAVGVPLGYALARWRAFARTVQPYIGASQAIPAVAVAPL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   + Y  ++  +  +++++F     ++    AG S    D    A      G R  R 
Sbjct: 111 LTIWIGYGAVSITVLCAIMVVF----PMIVTTAAGISRVDADVLGAARLDGAHGLRLARS 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G  T    ++  ++V E+ + G       GLG  +  +        + 
Sbjct: 167 VELPMAAPSILAGLRTGFTLSFTGAVVGEMVTGGD------GLGLTLTSAQHSADVTGMF 220



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 66/224 (29%), Gaps = 14/224 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +        P ++       L    L   A  T    L    ++           A+ R 
Sbjct: 28  VVNANFLPAPVEVAKRAYEGLRDGYLASAAWATLKEALLGASLAAAVGVPLGYALARWRA 87

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               + P +   Q+IP +       ++             ++         V+ M  +  
Sbjct: 88  FARTVQPYIGASQAIPAVAVAPLLTIWIGYG--------AVSITVLCAIMVVFPMIVTTA 139

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  +  D+   +R     G +    + +P + P ++  +    +  +   V  EM+  
Sbjct: 140 AGISRVDADVLGAARLDGAHGLRLARSVELPMAAPSILAGLRTGFTLSFTGAVVGEMVTG 199

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GD      G+G  +  A    D+  +  A+  +         L 
Sbjct: 200 GD------GLGLTLTSAQHSADVTGMFAAIALLAACAMCVYTLF 237


>gi|119387470|ref|YP_918504.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378045|gb|ABL72808.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 275

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 22/256 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L  +    +   + P  +     V ++    + L     T V         I      L 
Sbjct: 34  LEGLYDGVLWLSMLPPFYLAAVLVGLLAWRVLNLWAGIATAVAL-------IACAAMGLW 86

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                T   +++A +I+L  +     LA    RL   LVP+LD++Q++P   +L   +  
Sbjct: 87  PETMETLALVIAASIIALAISLPLGVLAGLMPRLDRALVPVLDLIQTMPPYIYLLPAIAL 146

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          A+ A     +          +   P +  E+  +  ++  Q FW 
Sbjct: 147 LG--------FGPATALVATVIVAMPPAIRLTSLGIRQTPNEFIELGHASGVTPAQMFWK 198

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +PF+MP ++  +  S+   +  VV + ++  G       G+G  I  AI+  D+   +
Sbjct: 199 IRLPFAMPSIMAGVNQSLMMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSI 251

Query: 243 YAMLTMLGVIFLYDQL 258
            A + ++ +  + D++
Sbjct: 252 NASIAIVVLTMVLDRV 267



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 86/237 (36%), Gaps = 16/237 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394
           V ++  +  F +   +   +AW+ +       T   ++    +G       T+  V+   
Sbjct: 41  VLWLSMLPPFYLAAVLVGLLAWRVLNLWAGIATAVALIACAAMGLWPETMETLALVIAAS 100

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           IIA  I +P+G+  G  P +   + P   L+   P  ++    ++ + +      +   +
Sbjct: 101 IIALAISLPLGVLAGLMPRLDRALVPVLDLIQTMPPYIYLLPAIALLGFGPATALVATVI 160

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +         +     G    PN+F E+  +  +T  + +  I LP   P  + G   + 
Sbjct: 161 V----AMPPAIRLTSLGIRQTPNEFIELGHASGVTPAQMFWKIRLPFAMPSIMAGVNQSL 216

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             A+   +++ +   G       GLG  I  +         +   + +    + L+R
Sbjct: 217 MMAFGMVVIAGIVGSG-------GLGETIYGAIRTLDIATSINASIAIVVLTMVLDR 266


>gi|69249960|ref|ZP_00605071.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|257878046|ref|ZP_05657699.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,230,933]
 gi|257881169|ref|ZP_05660822.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,502]
 gi|257889757|ref|ZP_05669410.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,410]
 gi|257892306|ref|ZP_05671959.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,408]
 gi|258616459|ref|ZP_05714229.1| Glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Enterococcus faecium DO]
 gi|260559095|ref|ZP_05831281.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium C68]
 gi|261207630|ref|ZP_05922315.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium TC 6]
 gi|293556792|ref|ZP_06675355.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Enterococcus faecium E1039]
 gi|293563448|ref|ZP_06677897.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium E1162]
 gi|293568139|ref|ZP_06679475.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium E1071]
 gi|294623602|ref|ZP_06702442.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium U0317]
 gi|314938059|ref|ZP_07845369.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|314941955|ref|ZP_07848816.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|314948791|ref|ZP_07852163.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
 gi|314951810|ref|ZP_07854849.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|314991784|ref|ZP_07857242.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|314995825|ref|ZP_07860912.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|68194049|gb|EAN08599.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Enterococcus faecium DO]
 gi|257812274|gb|EEV41032.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,230,933]
 gi|257816827|gb|EEV44155.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,502]
 gi|257826117|gb|EEV52743.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,410]
 gi|257828685|gb|EEV55292.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,408]
 gi|260074852|gb|EEW63168.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium C68]
 gi|260078013|gb|EEW65719.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium TC 6]
 gi|291589129|gb|EFF20941.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium E1071]
 gi|291596985|gb|EFF28196.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium U0317]
 gi|291601124|gb|EFF31413.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Enterococcus faecium E1039]
 gi|291604709|gb|EFF34194.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein [Enterococcus
           faecium E1162]
 gi|313589929|gb|EFR68774.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a01]
 gi|313593595|gb|EFR72440.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133B]
 gi|313596089|gb|EFR74934.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133A]
 gi|313599207|gb|EFR78052.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0133C]
 gi|313642634|gb|EFS07214.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium
           TX0133a04]
 gi|313644857|gb|EFS09437.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Enterococcus faecium TX0082]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|294500672|ref|YP_003564372.1| putative glycine/betaine/carnitine/choline ABC transporter
           permease/substrate-binding protein Opu [Bacillus
           megaterium QM B1551]
 gi|294350609|gb|ADE70938.1| putative glycine/betaine/carnitine/choline ABC transporter,
           permease/substrate-binding protein Opu [Bacillus
           megaterium QM B1551]
          Length = 506

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L ++   + L    A+VI++L +        +  R+   ++ +  ++Q+IP       
Sbjct: 17  QALLEHIQISVL----ALVIAVLISVPLGLYLTRHDRIAEPIIGVTAVLQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V      A+ A+F   +  +  + Y  +  +   L E S++  ++ W+
Sbjct: 67  --LALLGLLIPLVGIGTFPAVIALFLYSLLPIVRNTYTGIKEVDPSLIEASKAMGMNSWR 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P ++P ++  +  +M           ++++G   I    IG+      I L I
Sbjct: 125 RLIKVELPLALPVIMAGIRTAM-----------VLIIGTATIVAL-IGAGGLGSLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D   IL   +    +  ++D +L
Sbjct: 173 DRSDNSLILLGAIPAALLALIFDGIL 198



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ ++IA +I +P+G+++     I+  I     +L   P+     L++  V         
Sbjct: 27  VLALVIAVLISVPLGLYLTRHDRIAEPIIGVTAVLQTIPSLALLGLLIPLVGIG----TF 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   I+ N   G         E + +  +  WR    + LP   P  + G 
Sbjct: 83  PAVIALFLYSLLPIVRNTYTGIKEVDPSLIEASKAMGMNSWRRLIKVELPLALPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + +  +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIIGTATIVALIGAGGLGSLIL-------LGIDRSDNSLILLGAIPAALLALIFD 195

Query: 571 RFL 573
             L
Sbjct: 196 GIL 198


>gi|227551217|ref|ZP_03981266.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecium TX1330]
 gi|257896160|ref|ZP_05675813.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium Com12]
 gi|227179685|gb|EEI60657.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecium TX1330]
 gi|257832725|gb|EEV59146.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium Com12]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|294619252|ref|ZP_06698727.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Enterococcus faecium
           E1679]
 gi|291594503|gb|EFF25905.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Enterococcus faecium
           E1679]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|15613773|ref|NP_242076.1| ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10173826|dbj|BAB04929.1| ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 252

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 15/210 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L      +  R+     I+++       L A S+     L  ++  +QS+P + +
Sbjct: 47  FETGILTVATFESLSRIAIGFTIAVVVGSCLGILLALSKIADETLGSLVIALQSVPSIVW 106

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +V               A IF I     W MT +M   + N+   L   +R+    
Sbjct: 107 LPIALVVLQTGNT--------AIIFIIVLGGTWAMTMNMRMGIKNVQPLLIRAARTMGYR 158

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G +  W + +P S+P  +  M ++ + GW  ++A E++  G     L         A   
Sbjct: 159 GAELVWKVMIPASIPSALTGMRLAWAFGWRALIAGELLGRGGLGRTL-------LDARDF 211

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            ++  ++  M+ +  V  + + L+F P+  
Sbjct: 212 FNMELVIAIMMIIAVVGLIVEYLIFNPIER 241



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 78/217 (35%), Gaps = 11/217 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + ++  +  + +   +      ++ R+ +   IA ++   +GI +         +    
Sbjct: 36  LLSFVELYKGFFETGILTVATFESLSRIAIGFTIAVVVGSCLGILLALSKIADETLGSLV 95

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P+ V+ P+ +  +       N  +  +++ G  W +  N+  G           
Sbjct: 96  IALQSVPSIVWLPIALVVLQTG----NTAIIFIIVLGGTWAMTMNMRMGIKNVQPLLIRA 151

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +    G      +++P   P  +TG   A    W A I  E+   G +          
Sbjct: 152 ARTMGYRGAELVWKVMIPASIPSALTGMRLAWAFGWRALIAGELLGRGGLGRTL------ 205

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             ++ +  +   V+  ++I+    L +   +++P+  
Sbjct: 206 -LDARDFFNMELVIAIMMIIAVVGLIVEYLIFNPIER 241


>gi|310815037|ref|YP_003963001.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
 gi|308753772|gb|ADO41701.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
          Length = 254

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----TMFRVVVLII 395
           V  +  + + C+   +     W +                 +L       T++R VV ++
Sbjct: 9   VPILSIVVFLCLWELLVWVNQWPNYRMASPSDLPPAFWRFRYLFLEMSWQTLWRTVVGLL 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A I+   +G+ +GF   +   + P      A P     P++       H   +    L+
Sbjct: 69  LAVIVGTFLGMIMGFSRVLREALYPLLVGFNAVPKATLVPIISLLFIGQH---DFNTILM 125

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
               + + I  ++  G S    +++++  S   +    +R I LP   P +      A  
Sbjct: 126 AFMISFFPIAVSISIGLSTLEPEYRDILRSLGASRLTIFRKIALPKTLPEFFGALKVAVT 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A+  + + E+ S         GLGA        G +P +   ++ +    + L
Sbjct: 186 LAFIGTNLVEIVSPHGR-----GLGALFNSGAINGDYPLMFAVLIALAALGILL 234



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 90/260 (34%), Gaps = 16/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++I   I  ++ F+ +  ++  +             +           L + + +T  R 
Sbjct: 5   QKIAVPILSIVVFLCLWELLVWVNQWPNYRMASPSDLPPAFWRFRYLFL-EMSWQTLWRT 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  ++++++       +   SR L   L P+L    ++P    +    + F+  +     
Sbjct: 64  VVGLLLAVIVGTFLGMIMGFSRVLREALYPLLVGFNAVPKATLVPIISLLFIGQH----- 118

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +   I   F    + +  S+   L  +  +  ++ RS   S    F  + +P ++P  
Sbjct: 119 --DFNTILMAFMISFFPIAVSISIGLSTLEPEYRDILRSLGASRLTIFRKIALPKTLPEF 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++++  +      E++          G+G+         D   +   ++ +  + 
Sbjct: 177 FGALKVAVTLAFIGTNLVEIVS-----PHGRGLGALFNSGAINGDYPLMFAVLIALAALG 231

Query: 253 FLY---DQLLFRPMIVWSNK 269
            L      +L +    W+ +
Sbjct: 232 ILLYYGVVVLEKIFAGWAER 251


>gi|225018511|ref|ZP_03707703.1| hypothetical protein CLOSTMETH_02458 [Clostridium methylpentosum
           DSM 5476]
 gi|224948712|gb|EEG29921.1| hypothetical protein CLOSTMETH_02458 [Clostridium methylpentosum
           DSM 5476]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+VI++LF      L +  ++     + +++++ +IP +  L F + +          
Sbjct: 28  LIAIVIAILFGGFVGILISTFQKTSKPTLGVINLLYTIPSISMLGFLIPFSGIGN----- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  M  + +  + N+   + E ++    +  Q  + + +P +MP +
Sbjct: 83  ---ATAVIALTIYALLPMVRNTHTGMTNVDPGILEAAKGMGSTRLQILFKIKLPLAMPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          V  +  +    + I   G+G  I   I   +    +   L +  + 
Sbjct: 140 LSGIR-------SMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTMAGSLLIALLA 192

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 193 LVMDFLL 199



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 63/196 (32%), Gaps = 16/196 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I+IA +    VGI I      S        LL   P+      ++      +    +
Sbjct: 28  LIAIVIAILFGGFVGILISTFQKTSKPTLGVINLLYTIPSISMLGFLIPFSGIGNATAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G +       E A     T  +    I LP   P  ++G 
Sbjct: 88  ALTIYALL----PMVRNTHTGMTNVDPGILEAAKGMGSTRLQILFKIKLPLAMPVILSGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +          ++   +     +   GLG  I       +    + G L++    L ++
Sbjct: 144 RS-------MVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTMAGSLLIALLALVMD 196

Query: 571 RFLWHPLYLYGTRCLR 586
             L      +  R ++
Sbjct: 197 FLL-----GFIERRMK 207


>gi|312139011|ref|YP_004006347.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888350|emb|CBH47662.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 271

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A  T    L    +SL+  +  A L   S  L    VP+  + Q++PI+      +++F
Sbjct: 69  HAWATLQVTLIGFAVSLVVAWALAILVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                       L  +  I  +  + M   + +   +  R+   + RS   S WQ+F Y+
Sbjct: 129 GFGL--------LPKVLVIALATFFPMAIGLIEGFASADREAGALLRSMGASKWQQFRYV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + + ++      V +E +          G+G Y+++         +L 
Sbjct: 181 RLPSALPRFFTALRIGVTYAVVGAVFAEYVGASS------GLGIYMSVQKNSFRTDLVLA 234

Query: 244 AML---TMLGVIFLYDQLLFRPMIVW 266
           A+L   T+   ++L    + R +  W
Sbjct: 235 AVLVTATISVALYLCTFAIERVVAPW 260



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            +     +      T+   ++   ++ ++   + I + F P +     P   +    P  
Sbjct: 59  GWAHRDDIAVHAWATLQVTLIGFAVSLVVAWALAILVDFSPWLRRAFVPLFVVSQTLPII 118

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++    +  L       L++   T + +   +I G ++   +   +  S   + W
Sbjct: 119 AIAPLMIIWFGFGLL----PKVLVIALATFFPMAIGLIEGFASADREAGALLRSMGASKW 174

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +RY+ LP   P + T        A   ++ +E          ++GLG Y++       
Sbjct: 175 QQFRYVRLPSALPRFFTALRIGVTYAVVGAVFAEYVG------ASSGLGIYMSVQKNSFR 228

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+  VL+     +AL
Sbjct: 229 TDLVLAAVLVTATISVAL 246


>gi|311105500|ref|YP_003978353.1| binding-protein-dependent transporter inner membrane component
           family protein 29 [Achromobacter xylosoxidans A8]
 gi|310760189|gb|ADP15638.1| binding-protein-dependent transport system inner membrane component
           family protein 29 [Achromobacter xylosoxidans A8]
          Length = 338

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 67/189 (35%), Gaps = 10/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++ +    ++ +      G+ IG+   +   + P  + L   P+    P+         
Sbjct: 144 SLWLLANGFLLGAAAGFLTGVAIGWSRGLGYWVHPVLRFLGPVPSTALLPMAFFFFP--- 200

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+   T + +     +G +     + +VA +     W     + +P   P 
Sbjct: 201 -SSWSAAVFLIALATWFPVTVLTWSGVAGVNRAYYDVARTMGANEWFLVLRVAIPAALPQ 259

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G +++  + +E+          +GLG Y++ +    S+  +   +++M   
Sbjct: 260 VFVGLFMGLGASFSVLVAAEMMG------VKSGLGWYLSWAQGWASYANMYGALIVMALV 313

Query: 566 VLALNRFLW 574
              L   L+
Sbjct: 314 FSGLITLLF 322



 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 14/206 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D   L    + +   + +  ++     F+       SR LG  + P+L  +  +P   
Sbjct: 131 ATDYKRLADSLANSLWLLANGFLLGAAAGFLTGVAIGWSRGLGYWVHPVLRFLGPVPSTA 190

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L     +F          +  AA+F I  +  + +T   +  +  + R   +V+R+   
Sbjct: 191 LLPMAFFFF--------PSSWSAAVFLIALATWFPVTVLTWSGVAGVNRAYYDVARTMGA 242

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + W     + +P ++P +   + M +   +  +VA+EM+ V        G+G Y++ A  
Sbjct: 243 NEWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVAAEMMGVKS------GLGWYLSWAQG 296

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
                 +  A++ M  V      LLF
Sbjct: 297 WASYANMYGALIVMALVFSGLITLLF 322


>gi|257884832|ref|ZP_05664485.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,501]
 gi|257820670|gb|EEV47818.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,231,501]
          Length = 512

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|260221661|emb|CBA30448.1| hypothetical protein Csp_C23600 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 297

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L  +   T    L   V+      + + L   SR L   L+P +   Q++P+L   
Sbjct: 90  SPRNLIYHVIVTGQSTLLGFVMGTALGLLLSVLIVHSRTLDKALLPWIVASQTVPVLAIA 149

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V   +L             F       + +T +M Q L +  +   E+  ++  S 
Sbjct: 150 PIVLVVLGSLG----FSGTAPKAFIAMYLCFFPVTVAMVQGLRSPQKIETEMMHTYAASR 205

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ  W L +P ++P L   + + ++ G    + +E+           G+G+ +       
Sbjct: 206 WQSLWLLRLPAALPFLFPALRVGVAAGLVGAMVAELPTGAQA-----GLGARLLTGSYYG 260

Query: 237 DLLAILYAM-------LTMLGVIFLYDQLLFR 261
               I  A+       L + G++   ++L+ R
Sbjct: 261 QTTQIWSALVMSALLGLALTGIVAGVERLVLR 292



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 71/195 (36%), Gaps = 5/195 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+   +T    ++  ++ + + + + + I     +   + P+       P     P+V+
Sbjct: 94  LIYHVIVTGQSTLLGFVMGTALGLLLSVLIVHSRTLDKALLPWIVASQTVPVLAIAPIVL 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +     + + ++   + +   ++ G  +      E+  ++  + W+    + 
Sbjct: 154 VVLGSLGFSGTAPKAFIAMYLCFFPVTVAMVQGLRSPQKIETEMMHTYAASRWQSLWLLR 213

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P+               ++V+E+ +         GLGA +   +  G   ++   
Sbjct: 214 LPAALPFLFPALRVGVAAGLVGAMVAELPTGAQ-----AGLGARLLTGSYYGQTTQIWSA 268

Query: 559 VLIMCCFVLALNRFL 573
           +++     LAL   +
Sbjct: 269 LVMSALLGLALTGIV 283


>gi|257887665|ref|ZP_05667318.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,141,733]
 gi|257823719|gb|EEV50651.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium 1,141,733]
          Length = 512

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|16263930|ref|NP_436722.1| putative ABC transporter protein [Sinorhizobium meliloti 1021]
 gi|15140054|emb|CAC48582.1| putative ABC transporter protein [Sinorhizobium meliloti 1021]
          Length = 259

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     +   +LP +   T  R++ A V +++       L  +   +   L 
Sbjct: 42  LPQPWALWEPFVQAVSSGALPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLD 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P L  +    ++            E AAI A+  +++ N+   + +    +
Sbjct: 102 PWLVVFLNLPALVLIVLCYIWIGLN--------ETAAITAVVLNKIPNVATLLREGARAL 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL+ ++  +R+    +  ++ +P   P +       ++  W  V+  E +        
Sbjct: 154 DPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAVIWKIVLVVEFLG------R 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I    +  ++  +L   L+ +GV+ L +    +P      ++R
Sbjct: 208 SSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAERRVRRWR 257



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 14/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +T++RV+   + A +I + +G  +G    +   + P+  +    PA V   L  
Sbjct: 61  LPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCY 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +              ++      +   +  GA A   D   +A+ + +      R++I
Sbjct: 121 IWIGL----NETAAITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVI 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P+    A +     W   +V E         R++G+G  I    +  +   V++ 
Sbjct: 177 MPQLAPFIAAAARSGIAVIWKIVLVVEFLG------RSSGIGFQIHFYFQLFNVAMVLVY 230

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            L     +L +  F   P      R +R
Sbjct: 231 ALSFIGVMLLVEAFFLQP----AERRVR 254


>gi|170745108|ref|YP_001766565.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170658709|gb|ACB27763.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 271

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 85/226 (37%), Gaps = 20/226 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W +   +V   ++   L       IT+ R+   + +A+++ +P+G+ +G  P +    +
Sbjct: 57  VWHTWLGLVATPSFAADL------GITLGRIGAGLALAALVGLPLGLLLGASPRLGRFFE 110

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   +     + ++    +          N     ++       IL NV  G      + 
Sbjct: 111 PVLTVTNTVSSAIWAIFALIWFGLS----NWTTIFVVFMTAMPLILTNVWQGTRTVSAEH 166

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E+A +F +   +    I LP I P + +GA  A G      +V+E          ++G+
Sbjct: 167 LELARTFRMPRHKVLTKIYLPTILPAFFSGARLAIGFGARVVLVAESLG------ASSGI 220

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G  + ++ +     +V    L +   ++ L   +  P      + L
Sbjct: 221 GYRLRQAADLVQTDQVFAWTLTLVALMIGLETLVLKP----AEQRL 262



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+ + + ++ L       L   S RLG    P+L +  ++    +  F +++F    
Sbjct: 77  TLGRIGAGLALAALVGLPLGLLLGASPRLGRFFEPVLTVTNTVSSAIWAIFALIWFGL-- 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 +    IF +F + +  +  +++Q    +  +  E++R+FR+   +    + +P 
Sbjct: 135 ------SNWTTIFVVFMTAMPLILTNVWQGTRTVSAEHLELARTFRMPRHKVLTKIYLPT 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P       +++  G   V+ +E +          GIG  +  A        +    LT
Sbjct: 189 ILPAFFSGARLAIGFGARVVLVAESLGASS------GIGYRLRQAADLVQTDQVFAWTLT 242

Query: 248 MLGVIFLYDQLLFRP 262
           ++ ++   + L+ +P
Sbjct: 243 LVALMIGLETLVLKP 257


>gi|293606605|ref|ZP_06688961.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814990|gb|EFF74115.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 270

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 9/195 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++W    ++ R +   +IA +I +P+G+ +G        ++       + P++   PL +
Sbjct: 72  LLWDFLSSLNRTLQAFVIAGVIGVPLGVLLGSNEKAYRSVEFLVDFFRSTPSSALIPLFL 131

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  +N       +  F     ILFN   G           A     + W+ ++ ++
Sbjct: 132 MIFGVTDMNK----IAIAAFAAVLVILFNSAYGVINARKQRVMAARVMGASRWQIFKDVL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +         G  +    A    IV+E+          +GLG  I  + +  +  E+   
Sbjct: 188 IWESLQPTFVGLRSGVSMALVIVIVAEMFIGSD-----SGLGNRIINAQQVLNVREMYAA 242

Query: 559 VLIMCCFVLALNRFL 573
           +L        LN   
Sbjct: 243 ILAAGALGYVLNILF 257



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 16/263 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F   R  P I  L  FV+   ++ + L        P   +  +   L    L      + 
Sbjct: 21  FNGARFLPLIGPLALFVIWDLVVRLQLVSPVLLPTPSATIVALAKGLAGGPLLWDFLSSL 80

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R L A VI+ +       L   + +    +  ++D  +S P    +   ++ F      
Sbjct: 81  NRTLQAFVIAGVIGVPLGVLLGSNEKAYRSVEFLVDFFRSTPSSALIPLFLMIFGVTDMN 140

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K+  A  AA+  I         F+    + N  +     +R    S WQ F  + +  S+
Sbjct: 141 KIAIAAFAAVLVI--------LFNSAYGVINARKQRVMAARVMGASRWQIFKDVLIWESL 192

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
                 +   +S     V+ +EM +  D+     G+G+ I  A +  ++  +  A+L   
Sbjct: 193 QPTFVGLRSGVSMALVIVIVAEMFIGSDS-----GLGNRIINAQQVLNVREMYAAILAAG 247

Query: 250 GVIFLYDQLLF---RPMIVWSNK 269
            + ++ + L     + ++ WS +
Sbjct: 248 ALGYVLNILFLVLEKRVVHWSGR 270


>gi|209886471|ref|YP_002290328.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209874667|gb|ACI94463.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 272

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 91/267 (34%), Gaps = 18/267 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           ++     R   P +   +  +++    +     I    +P             H L  ++
Sbjct: 20  LITGPRVRDATPPVLTFVGLLILWEA-SCRYFEIPRWLLPSPADIYQAFRESGHELWGHS 78

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T    L    +S+      A +   S  L   + P+L  +QS+P +       ++   
Sbjct: 79  LITLYETLVGFALSIAVALPLAVIIVWSPILRRTVYPVLLALQSVPKVAVAPLLALWIG- 137

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L+ +  +F    + +       L ++   + ++ RS   +  Q F  +  
Sbjct: 138 -------FGTLSKVLVVFLICFFPIVVGATTGLASVQPAVMDLIRSLSATQMQTFIKIRF 190

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + ++++      V  E +          G+G  I ++  +        A+
Sbjct: 191 PTAMPHIFVGLKIAITLAVIGAVIGEFVG------SEEGLGYIILVSSSQARTPLAFAAL 244

Query: 246 LTMLGVIFLY---DQLLFRPMIVWSNK 269
           + +  +  +     + + + ++ W+ +
Sbjct: 245 VLLTVMSVILYYIVEFVEKILVPWAPR 271



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             IT++  +V   ++  + +P+ + I + P +   + P    L + P     PL+   + 
Sbjct: 78  SLITLYETLVGFALSIAVALPLAVIIVWSPILRRTVYPVLLALQSVPKVAVAPLLALWIG 137

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L+      L++     + I+     G ++      ++  S   T  + +  I  P  
Sbjct: 138 FGTLSK----VLVVFLICFFPIVVGATTGLASVQPAVMDLIRSLSATQMQTFIKIRFPTA 193

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL-- 560
            P+   G   A   A   +++ E            GLG  I  S+ +   P     ++  
Sbjct: 194 MPHIFVGLKIAITLAVIGAVIGEFVG------SEEGLGYIILVSSSQARTPLAFAALVLL 247

Query: 561 -IMCCFVLALNRFLWHPLYLYGTR 583
            +M   +  +  F+   L  +  R
Sbjct: 248 TVMSVILYYIVEFVEKILVPWAPR 271


>gi|157371363|ref|YP_001479352.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157323127|gb|ABV42224.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 255

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 89/230 (38%), Gaps = 19/230 (8%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P        +  D   L  +   T   +   ++  +L   V A     S RL   L+P
Sbjct: 38  LLPSPSSVAQALWNDRAYLGYHTLITAAEIACGLLAGVLLGAVLALCMIYSPRLQRWLMP 97

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q+IP+       V++F      KV+ A L   F         +T + +  L  + 
Sbjct: 98  LVLTSQAIPVFALAPLLVLWFGFGMSAKVVMAVLVIFF--------PVTSAFFDGLRRVN 149

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  +++R+ R S W +  ++ +  ++P     + M+ +      VA    ++G+ V   
Sbjct: 150 NDYLDLARTLRASPWAQLRHVRLMAALPAFGSGLRMAAA------VAPIGAIIGEWVGSA 203

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY----DQLLFRPMIVWSN 268
            G+G  +  A           A+  ++ +  L     D LL R +I W+ 
Sbjct: 204 EGLGYVMLNANARMQTDVCFAALFILVLMTVLLWVTVDALLLR-LIDWAP 252



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + D  Y+ +   IT   +   ++   ++   + + + + P +   + P      A
Sbjct: 45  VAQALWNDRAYLGYHTLITAAEIACGLLAGVLLGAVLALCMIYSPRLQRWLMPLVLTSQA 104

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V    +      +   L++ F     +      G     ND+ ++A +  
Sbjct: 105 IPVFALAPLLVLWFGFGMSAKVVMAVLVIFF----PVTSAFFDGLRRVNNDYLDLARTLR 160

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W   R++ L    P + +G   A   A   +I+ E            GLG  +  + 
Sbjct: 161 ASPWAQLRHVRLMAALPAFGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLNAN 214

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +         + I+    + L
Sbjct: 215 ARMQTDVCFAALFILVLMTVLL 236


>gi|289424093|ref|ZP_06425879.1| ABC transporter, permease protein [Peptostreptococcus anaerobius
           653-L]
 gi|289155518|gb|EFD04197.1| ABC transporter, permease protein [Peptostreptococcus anaerobius
           653-L]
          Length = 267

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 10/195 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +     +T+   ++  +I+ +  + VGI + F P I     P   +    P     
Sbjct: 67  DYRLLFMHSMVTLEETIIGFLISIVFALFVGILMDFIPIIKKCFYPIMYITQMIPTITIA 126

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V    +   +      L ++    + +L N +AG  +   D+  +      +    +
Sbjct: 127 PLLVIWFGFGIKSK----VLCVVLTCFFPVLINFMAGIESIDRDYLNLFKVMKSSKINTF 182

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++  P     + TG   +   A+ A+ V+E          + GLG Y+  +    +  +
Sbjct: 183 IHLKFPMSMDKFFTGLTISSTYAFVAATVAEWLGG------SIGLGVYMVRAKSSYALDK 236

Query: 555 VVLGVLIMCCFVLAL 569
           V    +++  F L  
Sbjct: 237 VFACTILVVIFSLIF 251



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            I   ++ + V  +I + +  +    +P+     +    D   L  ++  T    +   +
Sbjct: 29  PIITFISLLFVWELICVKM-SVPSYILPKPSDIGLEFRDDYRLLFMHSMVTLEETIIGFL 87

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS++F      L      +     PI+ I Q IP +      V++F      KV+   L 
Sbjct: 88  ISIVFALFVGILMDFIPIIKKCFYPIMYITQMIPTITIAPLLVIWFGFGIKSKVLCVVLT 147

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F         +  +    + +I RD   + +  + S    F +L  P SM      + 
Sbjct: 148 CFF--------PVLINFMAGIESIDRDYLNLFKVMKSSKINTFIHLKFPMSMDKFFTGLT 199

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S +  +     +E +          G+G Y+  A     L  +    + ++    ++  
Sbjct: 200 ISSTYAFVAATVAEWLGGSI------GLGVYMVRAKSSYALDKVFACTILVVIFSLIFVG 253

Query: 258 LL 259
           ++
Sbjct: 254 II 255


>gi|229190362|ref|ZP_04317363.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus ATCC
           10876]
 gi|228593146|gb|EEK50964.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus ATCC
           10876]
          Length = 503

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 28/211 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    S      L ++  +++       L  +  R+   ++    +MQ++P        
Sbjct: 14  ELLTALSEHLQISLISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   +L AI A+    +  +  + Y  +  +   L E +++  ++ W++
Sbjct: 67  -LALLGLLIPLVGIGKLPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSWRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            W + +  ++P ++  +  +M           +++VG   +    IG+      I L I 
Sbjct: 126 LWKVELTLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRP 262
             D   I+   +    +   +D   ++L RP
Sbjct: 174 RNDHALIILGAVPAALLALFFDIVLRILERP 204



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 14/189 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A II +P+GI +  +  ++  I   + ++   P+     L++  V    L   +
Sbjct: 27  LISLFFAVIIAVPLGILLTRKERMAEFIIGTSAVMQTVPSLALLGLLIPLVGIGKLPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E A +  +  WR    + L    P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIRELDESLIEAAKAMGMNSWRRLWKVELTLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIILGAVPAALLALFFD 195

Query: 571 ---RFLWHP 576
              R L  P
Sbjct: 196 IVLRILERP 204


>gi|283768868|ref|ZP_06341779.1| ABC transporter, substrate-binding protein, QAT family [Bulleidia
           extructa W1219]
 gi|283104654|gb|EFC06027.1| ABC transporter, substrate-binding protein, QAT family [Bulleidia
           extructa W1219]
          Length = 513

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 79/205 (38%), Gaps = 19/205 (9%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +  ++ L ++   T     +A+VI+++         ++  ++   ++ +++I  +IP + 
Sbjct: 14  SFYLNLLTEHIMIT----FTAVVIAIVVGLSIGIFISQKPKMAGYVISVVNIAYTIPSIA 69

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L F +                 AI A+    +  +  S Y  +  I   + E SR+   
Sbjct: 70  LLGFLISLTGIGNT--------TAIIALTIYALLPIVRSTYVGITTIDPKIIEASRAMGS 121

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
             +Q  + + +P + P +  ++M         V  +  +    + +   G+G  I   I 
Sbjct: 122 KEFQILYKIKLPLAFPVIFSSIM-------NMVTMTIALAGIASFVGAGGLGVAIYRGIT 174

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             + + IL   + +  +    D +L
Sbjct: 175 TNNEVLILIGSVLIAILALTVDGVL 199



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++IA ++ + +GI+I  +P ++  +     +    P+      ++S     +    +
Sbjct: 28  FTAVVIAIVVGLSIGIFISQKPKMAGYVISVVNIAYTIPSIALLGFLISLTGIGNTTAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      I+ +   G +       E + +     ++    I LP  FP   +  
Sbjct: 88  ALTIYALL----PIVRSTYVGITTIDPKIIEASRAMGSKEFQILYKIKLPLAFPVIFSSI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +       N   ++   +     +   GLG  I       +   +++G +++    L ++
Sbjct: 144 M-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNEVLILIGSVLIAILALTVD 196

Query: 571 RFL 573
             L
Sbjct: 197 GVL 199


>gi|24379126|ref|NP_721081.1| putative ABC transporter, permease protein [Streptococcus mutans
           UA159]
 gi|24377030|gb|AAN58387.1|AE014909_3 putative ABC transporter, permease protein [Streptococcus mutans
           UA159]
          Length = 328

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++     ++  + +   I   + +  GI +G+    +  + P  ++L   P+  F PL 
Sbjct: 126 FILKCDLFSLRLLAISWAIGIALGLLTGILVGWFTSFNYWLDPIVKILGPIPSTAFVPLA 185

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++               L+     + +     +G       + EVA +   T ++   ++
Sbjct: 186 LTAFPTSFA----ASIFLISLSVWFPVTILTNSGIQNVKKTYFEVADTLGATTFQKIAHV 241

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P    G       ++   + +E+           G+G YI    E   +  V  
Sbjct: 242 ALPASLPNVFVGIFNGACTSFITLMTAEMLG------VKYGIGWYINWQREVLGYANVYA 295

Query: 558 GVLIMCCFVLALNRFLWH 575
           G++ +      +   L+ 
Sbjct: 296 GLITIAVTFSLIITLLFK 313



 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +  +  I +    +   L          L PI+ I+  IP   F+   +  F  
Sbjct: 132 LFSLRLLAISWAIGIALGLLTGILVGWFTSFNYWLDPIVKILGPIPSTAFVPLALTAF-- 189

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +  A+IF I  S  + +T      + N+ +   EV+ +   + +QK  ++ +
Sbjct: 190 ------PTSFAASIFLISLSVWFPVTILTNSGIQNVKKTYFEVADTLGATTFQKIAHVAL 243

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+P +   +       +  ++ +EM+ V        GIG YI    +      +   +
Sbjct: 244 PASLPNVFVGIFNGACTSFITLMTAEMLGVK------YGIGWYINWQREVLGYANVYAGL 297

Query: 246 LTMLGVIFLYDQLLFR---PMIVWSNKF 270
           +T+     L   LLF+    ++ W   F
Sbjct: 298 ITIAVTFSLIITLLFKVRDRLLSWQKGF 325


>gi|325921963|ref|ZP_08183770.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
 gi|325547552|gb|EGD18599.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas gardneri ATCC 19865]
          Length = 294

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 93/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  V +  I   ++                   L    L +    +   +     + ++
Sbjct: 51  LVVLVAIWEIAARVVGDDLMLPSALQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVV 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   LAA +R    VL  +  +   +P +  L   +++F             + +F 
Sbjct: 111 LAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFV 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +P  L    R++ L G +    L +P ++P ++  + +  +
Sbjct: 163 LVHSVLWPLALTTYAGFQAVPETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWA 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + ++F+
Sbjct: 223 FAWRTLIAAELVFGATS--GQGGLGWYIFQNRNELYTDRVFAGLAMVIVLGLLVEGVVFQ 280

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 281 AIERLTVR 288



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 83/267 (31%), Gaps = 9/267 (3%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVL 377
            +I    P  +      ++   ++ +     +    +G   +   ++      +      
Sbjct: 29  ALIASAAPARWQAPPWLRKALVLVVLVAIWEIAARVVGDDLMLPSALQTARAFYDGLLSG 88

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++  +     +  ++   +             +     +    PA    PL 
Sbjct: 89  ELLRRVGASLRVLAQGYALGVVLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLA 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +    L  +++    W +     AG  A P   +    ++ + G R+   +
Sbjct: 149 LLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPETLRMAGRNYGLRGPRYVAQL 204

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++G       AW   I +E+           GLG YI ++  +     V  
Sbjct: 205 LIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTDRVFA 262

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRC 584
           G+ ++    L +   ++  +     R 
Sbjct: 263 GLAMVIVLGLLVEGVVFQAIERLTVRR 289


>gi|153011883|ref|YP_001373096.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151563771|gb|ABS17267.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 257

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 10/223 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W   V   AI          V    ++   + ++   +T+   ++  ++A +  + + I
Sbjct: 24  VWELSVRFFAISPILLPSPSAVWAEFWRMPSFFLYNAGVTLAVTLIGFLLAMVFGVLLAI 83

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            I     +   +  F   L + P     PL V  +            +L IF     I+ 
Sbjct: 84  VIVSSKTLERPVFSFLVALNSVPKVALAPLFVVWMGIGPEPKIAIAVMLAIFA----IVI 139

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           + + G  +   D   +A     + W+    I LP   P    G   A   A   +I+ E 
Sbjct: 140 DTVLGLRSVDPDMVNLARVGRASKWQILTKIRLPCALPSMFAGLKVAISLALIGAIIGEF 199

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                    ++GLG  I  +  +   P + + + ++      L
Sbjct: 200 VGG------SSGLGFAILSAQGQFDTPGLFVSLALLIAMGSLL 236



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 15/245 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I+ R+ P    L++ + V  +       I    +P                   A  T  
Sbjct: 7   IAARLLPGFVMLVSALAVWELSVRF-FAISPILLPSPSAVWAEFWRMPSFFLYNAGVTLA 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L   +++++F  + A +   S+ L   +   L  + S+P +      VV+       K
Sbjct: 66  VTLIGFLLAMVFGVLLAIVIVSSKTLERPVFSFLVALNSVPKVALAPLFVVWMGIGPEPK 125

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  A + AIFAI    V          L ++  D+  ++R  R S WQ    + +P ++P
Sbjct: 126 IAIAVMLAIFAIVIDTV--------LGLRSVDPDMVNLARVGRASKWQILTKIRLPCALP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + +++S      +  E +          G+G  I  A  + D   +  ++  ++ 
Sbjct: 178 SMFAGLKVAISLALIGAIIGEFVGGSS------GLGFAILSAQGQFDTPGLFVSLALLIA 231

Query: 251 VIFLY 255
           +  L 
Sbjct: 232 MGSLL 236


>gi|160940742|ref|ZP_02088084.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436262|gb|EDP14029.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC
           BAA-613]
          Length = 249

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  R+ +  + A  + I +G      P +   + P   L+ + P   F  L +  +    
Sbjct: 63  SFARISLGFLGAFALSILLGSLAYLFPLVKELLDPVMLLIKSVPVASFVILALIWIG--S 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  ++ S L++    +    + ++G         E+A  F +  W+   YI +P + PY
Sbjct: 121 RNLAVFTSFLVVVPMVY---VSTLSGLKHTDKKLLEMARVFRMPMWKRIHYIYVPALLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G  TA G +W + + +EV            +G  +  S        +     ++   
Sbjct: 178 LVNGCRTALGMSWKSGVAAEVIGIPEGS-----IGEQLYYSKLYLDTAGLFAWTFVIIII 232

Query: 566 VLALNRFL 573
                RF 
Sbjct: 233 SALFERFF 240



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 99/239 (41%), Gaps = 14/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L ++ V    N+L+H       P D+V  +       +       +  R+    + +  
Sbjct: 17  WLFWIAVWQTANLLIHNNIIFVGPLDMVKALAEQAADPAFWATILNSFARISLGFLGAFA 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            + +  +LA     +  +L P++ +++S+P+  F+   +++         IG+   A+F 
Sbjct: 77  LSILLGSLAYLFPLVKELLDPVMLLIKSVPVASFVILALIW---------IGSRNLAVFT 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   V  +  S    L +  + L E++R FR+  W++  Y+ VP  +P LV     ++ 
Sbjct: 128 SFLVVVPMVYVSTLSGLKHTDKKLLEMARVFRMPMWKRIHYIYVPALLPYLVNGCRTALG 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W   VA+E+I + +       IG  +  +    D   +      ++ +  L+++   
Sbjct: 188 MSWKSGVAAEVIGIPEGS-----IGEQLYYSKLYLDTAGLFAWTFVIIIISALFERFFL 241


>gi|76574790|gb|ABA47264.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas cichorii]
          Length = 343

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   ++     +   +   + + ++     G+ IG+   I   + P  + L   P+   
Sbjct: 137 EDWPRLLESLLHSALLLGTGVALGAVTGFVAGVAIGWSSSIGYWLHPVLRTLGPVPSTAL 196

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL                  L+   T + +     +G ++    + +VA +        
Sbjct: 197 LPLCFFLFPTSWS----ASVFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGARPGFL 252

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P+   G     G +++  +V+E+           G+G Y+  +    ++ 
Sbjct: 253 IFNVAIPAALPHVFVGLFMGLGASFSTLVVAEMMG------VKAGIGWYLQWAQGWAAYA 306

Query: 554 EVVLGVLIMCC 564
            +   +LIM  
Sbjct: 307 NMYAALLIMAL 317



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 99/269 (36%), Gaps = 20/269 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLP 62
                + RR+      L+A  +++GI  +L   +    VP        + +   D   L 
Sbjct: 84  RWSDGLGRRVQAVGPWLIALPVLLGIWEVLTAKLGLLPVPFFAPPQALLDVYVEDWPRLL 143

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    + L + + + +  +  FV       S  +G  L P+L  +  +P    L      
Sbjct: 144 ESLLHSALLLGTGVALGAVTGFVAGVAIGWSSSIGYWLHPVLRTLGPVPSTALLPLCFFL 203

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F          +  A++F I  +  + +T   +  + ++ +   +V+R+         + 
Sbjct: 204 F--------PTSWSASVFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGARPGFLIFN 255

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   + M +   +  +V +EM+ V        GIG Y+  A        + 
Sbjct: 256 VAIPAALPHVFVGLFMGLGASFSTLVVAEMMGVKA------GIGWYLQWAQGWAAYANMY 309

Query: 243 YAMLTMLGV---IFLYDQLLFRPMIVWSN 268
            A+L M      +     L+   ++ W  
Sbjct: 310 AALLIMALACSGLITALFLIRDRLLAWQQ 338


>gi|315640922|ref|ZP_07896018.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           italicus DSM 15952]
 gi|315483340|gb|EFU73840.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           italicus DSM 15952]
          Length = 212

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 79/185 (42%), Gaps = 15/185 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+V+ +L    +  L  + +++  V++ +   +Q+IP L  L   +  F           
Sbjct: 26  ALVLGVLVAVPFGVLLTRFKKIANVVISLTSALQTIPSLALLALMIPIFGVG-------- 77

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           +  AI A+F   +  +  + Y  + N+ RD  +V++   ++  Q  + + +P +MP ++ 
Sbjct: 78  KTPAIVALFIYSLLPILRNTYIGMKNVSRDYVDVAKGMGMTNVQSIFSVELPLAMPTIMA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++      +V+A   +    + I   G+G  I   +       I    + +  +  L
Sbjct: 138 GIRLAA----VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPALIFAGTIPVTILALL 190

Query: 255 YDQLL 259
            D LL
Sbjct: 191 ADYLL 195



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 59/187 (31%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     +++  ++ +P G+ +     I++ +      L   P+     L++        
Sbjct: 20  LYISAFALVLGVLVAVPFGVLLTRFKKIANVVISLTSALQTIPSLALLALMIPIFGVG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +   +   IL N   G      D+ +VA    +T  +    + LP   P  
Sbjct: 78  --KTPAIVALFIYSLLPILRNTYIGMKNVSRDYVDVAKGMGMTNVQSIFSVELPLAMPTI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A       + ++     G       GLG  I           +  G + +    
Sbjct: 136 MAGIRLAAVYVIAWATLASYIGAG-------GLGDLIFSGLNNYQPALIFAGTIPVTILA 188

Query: 567 LALNRFL 573
           L  +  L
Sbjct: 189 LLADYLL 195


>gi|206576191|ref|YP_002238052.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|206565249|gb|ACI07025.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
          Length = 331

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 85/271 (31%), Gaps = 11/271 (4%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC-G 354
           R+     W        +   L                       +  +L   W  +    
Sbjct: 46  RWPFSEGWALAQFTLGSGLLLLALSYRYWRARGARVRHAGKWLALLPVLFAVWEGLTAKS 105

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
             + + + +    +    + D   ++     ++  + + +++ +      G+ IG+   I
Sbjct: 106 AVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIGWSQRI 165

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  +LL   P+    PL +                L+   T + +     +G   
Sbjct: 166 GYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPVTVLTWSGVMG 221

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
               + +VA +   +       + +P   P    G     G +++  IV+E+        
Sbjct: 222 IDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVG------ 275

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G+G Y+  +    ++P +   +L+M   
Sbjct: 276 VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 306



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 152 GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 203

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 204 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 263

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 264 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 317

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 318 RDRLLSWQ 325


>gi|159186541|ref|NP_396148.2| ABC transporter, membrane spanning protein (glycine
           betaine/L-proline) [Agrobacterium tumefaciens str. C58]
 gi|159141601|gb|AAK90589.2| ABC transporter, membrane spanning protein (glycine
           betaine/L-proline) [Agrobacterium tumefaciens str. C58]
          Length = 307

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 87/236 (36%), Gaps = 16/236 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F + + +  ++ + +    +      I  + +    +   +  T   + +A+VIS + 
Sbjct: 52  IPFPIFLVLSFLIAYRLASLGIAI-FTAISFVVIASLGVWDESMTTLSLISTAIVISTVI 110

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A +  +  V+ P+LDIMQ+ P   +L   V+ F     G V G       A+
Sbjct: 111 GIPVGIWCAINNSVWQVVRPVLDIMQTTPTFVYLVPVVMLFGV---GTVPGE-----VAV 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +       +  +  ++ E   +F     Q  W +  P ++P ++  +  ++  
Sbjct: 163 VIAAAPPLIRFTNLGIRMVETEMVEAGLAFGADRRQLLWEIQFPLAIPTILGGLNQTVLT 222

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                V   MI          G+G  +   +   D+       + ++ +  + D++
Sbjct: 223 AMVMSVVVAMI-------GAEGLGLVVLQGLGRLDVGRAAVGGIAIILLAMILDRI 271



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 84/261 (32%), Gaps = 16/261 (6%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              L +        +          ++L    F +   ++  IA++     +  FT    
Sbjct: 22  WIALNLRPLFVAIKWPIENLLAFNDHILHAIPFPIFLVLSFLIAYRLASLGIAIFTAISF 81

Query: 377 LYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           + +  LG       T+  +   I+I+++I IPVGIW      +   ++P   ++   P  
Sbjct: 82  VVIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNSVWQVVRPVLDIMQTTPTF 141

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V+   VV       +   +     ++      ++     G      +  E   +F     
Sbjct: 142 VYLVPVVMLFGVGTVPGEVA----VVIAAAPPLIRFTNLGIRMVETEMVEAGLAFGADRR 197

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    I  P   P  + G       A   S+V  +           GLG  + +   +  
Sbjct: 198 QLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIG-------AEGLGLVVLQGLGRLD 250

Query: 552 FPEVVLGVLIMCCFVLALNRF 572
                +G + +    + L+R 
Sbjct: 251 VGRAAVGGIAIILLAMILDRI 271


>gi|295690692|ref|YP_003594385.1| glycine betaine ABC transporter substrate-binding protein
           [Caulobacter segnis ATCC 21756]
 gi|295432595|gb|ADG11767.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Caulobacter segnis ATCC 21756]
          Length = 515

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 15/210 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  LP+          SA+V+ L         AA+S RL  V +    ++Q+IP L  L 
Sbjct: 9   LAVLPERLGWHVALSASALVLGLAIALPLGIAAARSPRLKWVALGGAGLVQTIPSLALLA 68

Query: 118 F--TVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
               V+  ++    +V G        L ++ A+    +  +  +    +  I   + E +
Sbjct: 69  LFYPVLLLLSGLAERVFGQGFSALGFLPSLLALTLYSMLPILRNAAAGVSGIDPAVVEAA 128

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++  Q+ W + +P + P ++  +  +    W    A+    VG T      +G YI
Sbjct: 129 RGVGMTDRQRLWRVELPLAAPVIMAGVRTA--AVWTIGAATLSTPVGQTS-----LGDYI 181

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              ++ +D +A+L       G+  + D LL
Sbjct: 182 FSGLQTEDWVAVLVGCAASAGLAIVVDALL 211



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 19/195 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV----FFPLVVSCVSYYHL 446
              +++   I +P+GI     P +       A L+   P+      F+P+++        
Sbjct: 24  ASALVLGLAIALPLGIAAARSPRLKWVALGGAGLVQTIPSLALLALFYPVLLLLSGLAER 83

Query: 447 NPNLWLSLLMIFGTQW--------YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 S L    +           IL N  AG S       E A    +T  +    + 
Sbjct: 84  VFGQGFSALGFLPSLLALTLYSMLPILRNAAAGVSGIDPAVVEAARGVGMTDRQRLWRVE 143

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G  TA      A+ +S         +  T LG YI    +   +  V++G
Sbjct: 144 LPLAAPVIMAGVRTAAVWTIGAATLS-------TPVGQTSLGDYIFSGLQTEDWVAVLVG 196

Query: 559 VLIMCCFVLALNRFL 573
                   + ++  L
Sbjct: 197 CAASAGLAIVVDALL 211


>gi|327469521|gb|EGF14990.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK330]
          Length = 506

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 79/198 (39%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++    I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQFAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +  FA +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQFAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|328542413|ref|YP_004302522.1| nitrate/sulfonate/bicarbonate ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326412160|gb|ADZ69223.1| Probable nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 290

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 95/283 (33%), Gaps = 24/283 (8%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----- 374
           +   +   P              +       ++  + +  AW    Y V H+        
Sbjct: 12  VTPAKLDEPAPIAPRAEGLGERLLKIAVPLTMLALLIVVWAWYVSAYDVPHYILPSPSRV 71

Query: 375 ------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                 D   +     IT+   +  + IA +  + + I +     I   + P+A +L   
Sbjct: 72  LQSLIDDWGTLSGALLITLKITLTALGIALVGGVGIAILMAQSRWIELALYPYAVILQVT 131

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL++           +   ++      + IL N   G  +  ++   +   +  
Sbjct: 132 PIVAIAPLILIYAPTTQAALLICAWIV----AFFPILSNTTQGLKSTDHNLLNLFELYGA 187

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W+    + +P   PY++ G   A G A  A++V+E A+        +GL   + ES  
Sbjct: 188 SRWQTLMLLKIPNALPYFLAGLRIAGGLALIAAVVAEFAAGSA--GAQSGLAYRLLESQF 245

Query: 549 KGSFPEVVLGVLIMCCFVL-------ALNRFLWHPLYLYGTRC 584
           + + P +   ++++    +        ++  L    +    + 
Sbjct: 246 RLNIPRLFAALILLSVTGVVIFFVTSLISHLLLRRWHESALKR 288



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 88/234 (37%), Gaps = 10/234 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA ++V+    +  + +    +P     +  +  D  +L      T    L+A+ I+L+
Sbjct: 43  MLALLIVVWAWYVSAYDVPHYILPSPSRVLQSLIDDWGTLSGALLITLKITLTALGIALV 102

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L A+SR + + L P   I+Q  PI+      ++Y            + A +  
Sbjct: 103 GGVGIAILMAQSRWIELALYPYAVILQVTPIVAIAPLILIY--------APTTQAALLIC 154

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +    + +  +  Q L +   +L  +   +  S WQ    L +P ++P  +  + ++  
Sbjct: 155 AWIVAFFPILSNTTQGLKSTDHNLLNLFELYGASRWQTLMLLKIPNALPYFLAGLRIAGG 214

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E      +     G+   +  +    ++  +  A++ +     + 
Sbjct: 215 LALIAAVVAEF--AAGSAGAQSGLAYRLLESQFRLNIPRLFAALILLSVTGVVI 266


>gi|40787264|gb|AAR90181.1| putative transporter permease [Rhodococcus sp. DK17]
          Length = 271

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 86/245 (35%), Gaps = 16/245 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFR 389
           S +    +L I     + GV   IA  S        +   V  +   G I      TM  
Sbjct: 26  SQRWTDNLLRILIVIGLIGVWALIAATSELVPSPGASMSAVWGLFADGFIYRNLNATMSA 85

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V +  +IA+ +  P G  IG    +     P      A P  +FFP+++          +
Sbjct: 86  VGLGFVIATAVGFPTGYIIGRSKFLGDVFDPIIAGAFAIPRVIFFPILLQIFGLGLGAQS 145

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              +L  +F     I+ +  AG  A      ++  +   +  +    I++P + P  + G
Sbjct: 146 AMAALAAVF----PIIVSTAAGVRAINPILLKLGRATGASPLQTMSKIVVPAMAPSLMVG 201

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A+   +++E  +         GLG     +  K   P +   ++++    L  
Sbjct: 202 IRIGFSIAFINVLIAEFFA------TRAGLGQMAMLAYGKLDLPTMYGVIMLLVSMALMG 255

Query: 570 NRFLW 574
           N  LW
Sbjct: 256 NIALW 260



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 95/252 (37%), Gaps = 14/252 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +S+R   N+  +L  + +IG+  ++    +    P   +  V        + +  + T
Sbjct: 23  FRLSQRWTDNLLRILIVIGLIGVWALIAATSELVPSPGASMSAVWGLFADGFIYRNLNAT 82

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +    VI+    F    +  +S+ LG V  PI+    +IP + F    +  F     
Sbjct: 83  MSAVGLGFVIATAVGFPTGYIIGRSKFLGDVFDPIIAGAFAIPRVIFFPILLQIFGLGLG 142

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            +   A LAA+F         +  S    +  I   L ++ R+   S  Q    + VP  
Sbjct: 143 AQSAMAALAAVF--------PIIVSTAAGVRAINPILLKLGRATGASPLQTMSKIVVPAM 194

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P L+  + +  S  +  V+ +E            G+G    LA  + DL  +   ++ +
Sbjct: 195 APSLMVGIRIGFSIAFINVLIAEFFA------TRAGLGQMAMLAYGKLDLPTMYGVIMLL 248

Query: 249 LGVIFLYDQLLF 260
           + +  + +  L+
Sbjct: 249 VSMALMGNIALW 260


>gi|315604188|ref|ZP_07879254.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313894|gb|EFU61945.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 257

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T    V   ++ S + +P    I     +++ ++PF     A PA    P++V  V Y 
Sbjct: 66  VTGAEAVAGCLLGSAVALPSAYVIYRSRLLAAAVEPFLGATQALPAIAIAPILVLWVGYG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                +  +L++ F     IL + + G      +  E A+    TGW    ++ LP   P
Sbjct: 126 FTAIVVLCALMVFF----PILVSTVVGLRHIDRELLEAAALDGATGWTMAWHMELPLAAP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       +   ++V E+   G      +GLG  + +         + + ++I+C 
Sbjct: 182 AILGGLRNGFALSVTGAVVGEMVMGG------SGLGQVLTQMRNNVDTAGMFVVIIILCT 235

Query: 565 FVLALNRFLWH 575
               L   ++ 
Sbjct: 236 MATLLYTIVYR 246



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 14/254 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P      + P +F  +          +          P  ++    + L + +       
Sbjct: 7   PGGALTVVAPILFLAVLAAGWWLSTTLTGIEAWRLPHPMSVISKGSVILVLPTTWHRVQV 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  ++        A +  +SR L   + P L   Q++P +      V++    +
Sbjct: 67  TGAEAVAGCLLGSAVALPSAYVIYRSRLLAAAVEPFLGATQALPAIAIAPILVLWVGYGF 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A +        + +  S    L +I R+L E +     +GW   W++ +P 
Sbjct: 127 T--------AIVVLCALMVFFPILVSTVVGLRHIDRELLEAAALDGATGWTMAWHMELPL 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++  +    +      V  EM++ G       G+G  +       D   +   ++ 
Sbjct: 179 AAPAILGGLRNGFALSVTGAVVGEMVMGGS------GLGQVLTQMRNNVDTAGMFVVIII 232

Query: 248 MLGVIFLYDQLLFR 261
           +  +  L   +++R
Sbjct: 233 LCTMATLLYTIVYR 246


>gi|218662135|ref|ZP_03518065.1| taurine uptake ABC transporter, permease protein [Rhizobium etli
           IE4771]
          Length = 188

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 69/180 (38%), Gaps = 10/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           +VV  +IA    IP+G+ +G        +    +     P   + PL++  +     +  
Sbjct: 1   IVVAALIAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGIGETSK- 59

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                L++      I  +  AG  + P +    A S      + +  I+LP   P  +TG
Sbjct: 60  ---ITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGANRLQLFIDIVLPSALPEILTG 116

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A G  W+  + +E+ +       T G+G  I  +++  +   V +G+ I+       
Sbjct: 117 IRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIAIIAVCAFTF 170



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 17/201 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++ A +I++        L   +R    VL   ++    +P L +L   +++         
Sbjct: 1   IVVAALIAISAGIPLGLLMGLNRWAKGVLDAPIEFYWPLPPLSYLPLMIIWLGIG----- 55

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + I  +  +    +  S    + ++P +    +RS   +  Q F  + +P ++P 
Sbjct: 56  ---ETSKITLLVLAMFAPICLSAQAGVRSLPIERVNAARSLGANRLQLFIDIVLPSALPE 112

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++  GW  +VA+E+I          GIG  I  A +      +   +  +   
Sbjct: 113 ILTGIRIALGVGWSTLVAAELIA------STRGIGFMIMSASQFLATDVVFVGIAIIAVC 166

Query: 252 IFLY---DQLLFRPMIVWSNK 269
            F +    + L   ++ W  K
Sbjct: 167 AFTFSSAIRFLETYLVPWKGK 187


>gi|328542621|ref|YP_004302730.1| Aliphatic sulfonates transport permease [polymorphum gilvum
           SL003B-26A1]
 gi|326412367|gb|ADZ69430.1| Aliphatic sulfonates transport permease protein, putative
           [Polymorphum gilvum SL003B-26A1]
          Length = 255

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++D++       +L  + S T LR+L++  I++    +   L  +SR     L 
Sbjct: 36  LPSPAAVLDVLWREARNGNLWTHLSATLLRVLASFAIAMSIGTLLGLLMGRSRLANTWLN 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L  + ++P L  +    ++        V+   +  I  +        T  + +    +
Sbjct: 96  PWLIALLNLPALVAIVLAYIWIGLNEVAAVVAVAVNKIPVV--------TVMLREGTRAL 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L+E++RSFR+    +  ++ VP   P +       +S  W  V+  E +   +    
Sbjct: 148 DPRLDEMARSFRMPTLTRLRHVVVPQLAPHVASASRAGISLIWKIVLVVEFLGRSN---- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I L  +  ++  +L   ++ + V+   +  + +P     +++R
Sbjct: 204 --GIGFQIHLYFELFNVAYVLAYAISFIVVMLTVEYAVLQPWEQRVSRWR 251



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+ RV+    IA  I   +G+ +G     ++ + P+   L   PA V   L    +   
Sbjct: 61  ATLLRVLASFAIAMSIGTLLGLLMGRSRLANTWLNPWLIALLNLPALVAIVLAYIWIGLN 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            +   + +++  I      +   +  G  A      E+A SF +      R++++P + P
Sbjct: 121 EVAAVVAVAVNKIPV----VTVMLREGTRALDPRLDEMARSFRMPTLTRLRHVVVPQLAP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  + +       W   +V E         R+ G+G  I    E  +   V+   +    
Sbjct: 177 HVASASRAGISLIWKIVLVVEFLG------RSNGIGFQIHLYFELFNVAYVLAYAISFIV 230

Query: 565 FVLALNRFLWHPL 577
            +L +   +  P 
Sbjct: 231 VMLTVEYAVLQPW 243


>gi|319957569|ref|YP_004168832.1| binding-protein-dependent transport systems inner membrane
           component [Nitratifractor salsuginis DSM 16511]
 gi|319419973|gb|ADV47083.1| binding-protein-dependent transport systems inner membrane
           component [Nitratifractor salsuginis DSM 16511]
          Length = 260

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 93/249 (37%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   + +  +   L+G      P      V             S T  R+     +SL+ 
Sbjct: 25  IFLFIALWDLGSQLYGDMILPSPLHSFQTVVTLFHNDEFLANLSLTIERVAVGFAVSLVI 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   LA       +   PI+ I+  +P + ++   +++F            +   F +
Sbjct: 85  GTLLGLLAGFFVTASITSRPIITILMGMPPIAWIVLAMIWFGMG--------NMTVEFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  +     Q    +    +E++ +F++    KF  + +P     +    + ++  
Sbjct: 137 IVASLPIVFIGALQGTRTLEDKFDEMADTFKVPRMMKFTDIYLPHIFSYIFPAWVSALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  VV +E++   D      GIG+ +A+A  + D    +  ++ M+G + + + +   P
Sbjct: 197 AWKIVVMAELLAASD------GIGAALAMARSQLDTDTAMALVVIMIGSLMIVEYIFLEP 250

Query: 263 MIVWSNKFR 271
           +     K+R
Sbjct: 251 IKREVEKWR 259



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 90/265 (33%), Gaps = 10/265 (3%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            L  I   FP             ++    W          I    +       T      
Sbjct: 3   ALKKIIRDFPAFLWGGWGALAAIFLFIALWDLGSQLYGDMILPSPLHSFQTVVTLFHNDE 62

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +    +T+ RV V   ++ +I   +G+  GF    S   +P   +L   P   +  L +
Sbjct: 63  FLANLSLTIERVAVGFAVSLVIGTLLGLLAGFFVTASITSRPIITILMGMPPIAWIVLAM 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 ++         +I  +   +    + G     + F E+A +F +     +  I 
Sbjct: 123 IWFGMGNMTVE----FTVIVASLPIVFIGALQGTRTLEDKFDEMADTFKVPRMMKFTDIY 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP IF Y     ++A G AW   +++E+ +       + G+GA +A +  +      +  
Sbjct: 179 LPHIFSYIFPAWVSALGMAWKIVVMAELLA------ASDGIGAALAMARSQLDTDTAMAL 232

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
           V+IM   ++ +      P+     +
Sbjct: 233 VVIMIGSLMIVEYIFLEPIKREVEK 257


>gi|294616228|ref|ZP_06696022.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Enterococcus faecium E1636]
 gi|291590910|gb|EFF22625.1| glycine betaine/carnitine/choline ABC transporter,
           substrate-binding protein [Enterococcus faecium E1636]
          Length = 512

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIR--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVW 266
            + +I  G       G+G++I L I           +LT++G I      ++F  +I W
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTP------VLTLIGAISSALLAIIFSGLIRW 200



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIRTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|229827739|ref|ZP_04453808.1| hypothetical protein GCWU000182_03129 [Abiotrophia defectiva ATCC
           49176]
 gi|229787938|gb|EEP24052.1| hypothetical protein GCWU000182_03129 [Abiotrophia defectiva ATCC
           49176]
          Length = 259

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 97/254 (38%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F  +  +++  ++++     +        ++ +   +D        + + + +    ++
Sbjct: 17  LFSFIVAMILWYLLSLNPQTARSFPNVVLTLESIKTMMDRGVFFTDITSSLISVSVGFLL 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             + +   A L A    +  ++ P +  +++IP L ++   V+                 
Sbjct: 77  GFVLSLPTAILMAWYAPVRNIIEPWIQFIRNIPPLAYVPLVVI--------SAGVGRKPQ 128

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +    MT ++YQ + N+   L + +R    +    F+ +  P ++P ++  + +
Sbjct: 129 IIVITIATFLIMTVTIYQGVVNVDETLIKAARVLGATDRDIFFRVIAPATLPFIITAIRL 188

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             S     ++A+E      +   + G+G  I       +   +L  ++ +  +  L ++L
Sbjct: 189 GSSTALTTLIAAE------STGAVAGLGMRIRSLNNSFESAPMLMYIIIIGIIGMLVEKL 242

Query: 259 ---LFRPMIVWSNK 269
              L R    W  K
Sbjct: 243 VKYLERRFTSWQEK 256



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIW 381
           +   +L +  +  ++L  F   ++    + +  Q+     N         T  D      
Sbjct: 2   KKTGKLAAIPKWLWLLFSFIVAMILWYLLSLNPQTARSFPNVVLTLESIKTMMDRGVFFT 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               ++  V V  ++  ++ +P  I + +   + + I+P+ Q +   P   + PLVV   
Sbjct: 62  DITSSLISVSVGFLLGFVLSLPTAILMAWYAPVRNIIEPWIQFIRNIPPLAYVPLVVISA 121

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                       +++   T   +   +  G         + A     T    +  +I P 
Sbjct: 122 GVGRKPQ----IIVITIATFLIMTVTIYQGVVNVDETLIKAARVLGATDRDIFFRVIAPA 177

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             P+ +T        A    I +E            GLG  I
Sbjct: 178 TLPFIITAIRLGSSTALTTLIAAE------STGAVAGLGMRI 213


>gi|322390806|ref|ZP_08064316.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
 gi|321142476|gb|EFX37944.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
          Length = 506

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 20/203 (9%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      +++   ++ +  I Q+IP +  L   + +             L 
Sbjct: 32  VAIFLTIPLAVYLNSHKKVANWVLQVAGIFQTIPSMALLGLFIPFMGIG--------TLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTITALNGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAILAILFNV 196

Query: 258 LLFRPMIVWSNKFRLERTTGIYP 280
           +L      W  K +L      + 
Sbjct: 197 IL-----KWLEKAKLRTIVAAFA 214



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++     +++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAVYLNSHKKVANWVLQVAGIFQTIPSMALLGLFIPFMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 92  AIF----PILENTITALNGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAILAILFNVIL 198


>gi|289434706|ref|YP_003464578.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289170950|emb|CBH27492.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313633278|gb|EFS00141.1| BilEB [Listeria seeligeri FSL N1-067]
          Length = 504

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +R+   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRIAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     I+   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRIA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|311109678|ref|YP_003982531.1| binding-protein-dependent transporter inner membrane component
           family protein 69 [Achromobacter xylosoxidans A8]
 gi|310764367|gb|ADP19816.1| binding-protein-dependent transport system inner membrane component
           family protein 69 [Achromobacter xylosoxidans A8]
          Length = 292

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 85/239 (35%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L     +  +                        +    L   A ++   +       + 
Sbjct: 49  LALLAGIWELAARYTDNDLLLPSATQTAVAFVQGIAGGELLARAGQSLRVLAQGYAAGVA 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV  TLA  +R    +L  +  +   +P +  L   +++F           E + +F 
Sbjct: 109 LAFVLTTLAVSTRFGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------EGSLVFV 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +   L    R++ L+G +    + VP ++P ++  + +  +
Sbjct: 161 LIHSVLWALALNTYAGFLGVSETLRMAGRNYGLTGLRYVLQILVPAALPAILAGLRIGWA 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 221 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLAAVVIIGLLVENLVF 277



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  ++I    W +  N  AG        +    ++ +TG R+   I++P   P  + G  
Sbjct: 157 LVFVLIHSVLWALALNTYAGFLGVSETLRMAGRNYGLTGLRYVLQILVPAALPAILAGLR 216

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 217 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLAAVVIIGLLVEN 274

Query: 572 FLWHPLYLYGTRC 584
            ++  +     R 
Sbjct: 275 LVFDTVERVTVRR 287


>gi|294786455|ref|ZP_06751709.1| choline transporter [Parascardovia denticolens F0305]
 gi|315226025|ref|ZP_07867813.1| choline ABC superfamily ATP binding cassette transporter,
           osmoprotectant binding protein [Parascardovia
           denticolens DSM 10105]
 gi|294485288|gb|EFG32922.1| choline transporter [Parascardovia denticolens F0305]
 gi|315120157|gb|EFT83289.1| choline ABC superfamily ATP binding cassette transporter,
           osmoprotectant binding protein [Parascardovia
           denticolens DSM 10105]
          Length = 545

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 74/199 (37%), Gaps = 26/199 (13%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++     A      +R    ++ +  I Q+IP         +  + L    +    + A
Sbjct: 33  AIVIAIPLAIWLYNKKRASEAILQVTGIFQTIPS--------LALLGLLIPLMGIGTVPA 84

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    ++ +       L  I   L E   +F ++  ++     +P +MP ++  +  
Sbjct: 85  VTALVIYALFPIVQGTVTGLRGIDPSLVEAGEAFGMTQGERLRKYEIPLAMPVIIAGVR- 143

Query: 199 SMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                     A+ MI+   T   +I   G+G +I L I   D   IL   ++   +  L+
Sbjct: 144 ---------TAAIMIIGTATLASLIGAGGLGDFILLGIDRNDNSLILIGAISAALLAILF 194

Query: 256 DQLLFRPMIVWSNKFRLER 274
             L+      W  K  L++
Sbjct: 195 STLI-----HWLEKQSLKK 208



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 11/177 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I IP+ IW+  +   S  I     +    P+     L+   +    +     ++ L+
Sbjct: 33  AIVIAIPLAIWLYNKKRASEAILQVTGIFQTIPSLA---LLGLLIPLMGIGTVPAVTALV 89

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I+   + I+   + G         E   +F +T     R   +P   P  + G  TA   
Sbjct: 90  IY-ALFPIVQGTVTGLRGIDPSLVEAGEAFGMTQGERLRKYEIPLAMPVIIAGVRTAAIM 148

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++ +   G       GLG +I    ++     +++G +      +  +  +
Sbjct: 149 IIGTATLASLIGAG-------GLGDFILLGIDRNDNSLILIGAISAALLAILFSTLI 198


>gi|229541806|ref|ZP_04430866.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229326226|gb|EEN91901.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 217

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 19/207 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +     ++A+++ ++          K RR   +++ I  ++Q+ P L  L
Sbjct: 11  NWSELLFKTWQHFYISITAVILGIVVAVPLGIWLTKYRRAANIVMGIAGVIQTFPSLAIL 70

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F +  F           +L AI A+F   V  +  + Y  +  I   L E  R   ++G
Sbjct: 71  AFFIPIFGIG--------KLPAIAALFFYSVLPILRNTYTGVKGIDPKLVEAGRGMGMTG 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           W++  +L +P ++P ++  + +S     GW  +          + I   G+G YI   + 
Sbjct: 123 WERVIHLELPLAIPVIMAGIRLSTVYLIGWATL---------ASFIGAGGLGDYIFSGLN 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
                 I    + +  +  + D L  +
Sbjct: 174 LYQPEMIAAGAVPVTILALIVDYLFGK 200



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 14/201 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++L+  W      +  +  +I+  ++ +P+GIW+      ++ +   A ++  FP+  
Sbjct: 12  WSELLFKTWQH---FYISITAVILGIVVAVPLGIWLTKYRRAANIVMGIAGVIQTFPSLA 68

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                +           L     + F +   IL N   G         E      +TGW 
Sbjct: 69  ILAFFIPIFGIG----KLPAIAALFFYSVLPILRNTYTGVKGIDPKLVEAGRGMGMTGWE 124

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              ++ LP   P  + G   +       + ++     G       GLG YI         
Sbjct: 125 RVIHLELPLAIPVIMAGIRLSTVYLIGWATLASFIGAG-------GLGDYIFSGLNLYQP 177

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             +  G + +    L ++   
Sbjct: 178 EMIAAGAVPVTILALIVDYLF 198


>gi|33595338|ref|NP_882981.1| putative transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33599633|ref|NP_887193.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33565415|emb|CAE36222.1| putative transport system permease protein [Bordetella
           parapertussis]
 gi|33567229|emb|CAE31143.1| putative transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 261

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+   +        L  +   TT   +   V+      V   L A+ R L  ++ 
Sbjct: 36  LPPPLDVFRALWHGYSTGLLWPHLLTTTAETIGGFVLGCSVAVVVGGLVAEFRLLERMVY 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +  +QS+P +      +V+F      KV+   L   F         M  ++   L   
Sbjct: 96  PYVVALQSMPKVALAPLLIVWFGFGLMSKVVLVALICFF--------PMFVNVVTGLRGA 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++L ++  +F  S +Q F  + +P ++P +   + +++       V  E +        
Sbjct: 148 RQELIDLYTAFSASRFQIFRDIKLPSALPSIFAGLQIALVLSLLGAVVGEFVA------S 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSN 268
             G+GS I  A    DL  +   +LT   M  +  L      R ++ W  
Sbjct: 202 QKGLGSLIQAASLNFDLPIMFACILTLAFMGAMATLVVNWAQRRLLFWHE 251



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   + P+   L + P     PL++    +  ++      +L+     + +  NV+ G
Sbjct: 88  RLLERMVYPYVVALQSMPKVALAPLLIVWFGFGLMSK----VVLVALICFFPMFVNVVTG 143

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 +  ++ ++F  + ++ +R I LP   P    G   A   +   ++V E  +   
Sbjct: 144 LRGARQELIDLYTAFSASRFQIFRDIKLPSALPSIFAGLQIALVLSLLGAVVGEFVASQK 203

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFVLALNRFLWHPLYLYGTR 583
                 GLG+ I  ++     P +   +L    M      +  +    L  +   
Sbjct: 204 ------GLGSLIQAASLNFDLPIMFACILTLAFMGAMATLVVNWAQRRLLFWHET 252


>gi|310815891|ref|YP_003963855.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
 gi|308754626|gb|ADO42555.1| ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare
           Y25]
          Length = 278

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 96/248 (38%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +L+ G+  +    G      P  +           ++P+   +T   +++  VIS +
Sbjct: 37  IAVLLLAGMYALNGAQGNLVMPRPDAVARQFVAMTLDGTIPRALGQTLTVLVAGFVISAV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   +      +G V+ P ++ +   P   F+   + +F      K+    LAA F 
Sbjct: 97  TGVLGGIILGGFPTIGRVMEPFVNAINVTPSAAFIPLLIAWFSLYTEAKIALVWLAAFF- 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +    + N  +DL E++++F       FW + VP ++P ++  + + ++
Sbjct: 156 -------PILLNTTSGIANANKDLTEMAQAFGARRRALFWSVMVPDALPSILTGLRIGVA 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTMLGVIFLYDQL 258
                 V +E+       +   G+G  +  A     +    A++  ++ +  +I    + 
Sbjct: 209 ISTIGTVIAEL------TMAQSGLGGLLTAAGNRFQMDRYFAVVVVLMALGILITSGIRR 262

Query: 259 LFRPMIVW 266
           + R    W
Sbjct: 263 VERHFGRW 270



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  +V   +I+++  +  GI +G  P I   ++PF   +   P+  F PL+++  S Y 
Sbjct: 83  TLTVLVAGFVISAVTGVLGGIILGGFPTIGRVMEPFVNAINVTPSAAFIPLLIAWFSLY- 141

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    L+     + IL N  +G +    D  E+A +F       +  +++P   P 
Sbjct: 142 ---TEAKIALVWLAAFFPILLNTTSGIANANKDLTEMAQAFGARRRALFWSVMVPDALPS 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG       +   ++++E+       +  +GLG  +  +  +         V+++   
Sbjct: 199 ILTGLRIGVAISTIGTVIAEL------TMAQSGLGGLLTAAGNRFQMDRYFAVVVVLMAL 252

Query: 566 VLALNRFLWH 575
            + +   +  
Sbjct: 253 GILITSGIRR 262


>gi|56964647|ref|YP_176378.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus clausii KSM-K16]
 gi|56910890|dbj|BAD65417.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus clausii KSM-K16]
          Length = 265

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 96/242 (39%), Gaps = 17/242 (7%)

Query: 23  LAFVLVIGIINILLHGIQET---TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + F LVIG        + +    ++P  IV ++   +   +L  +   T    +   ++ 
Sbjct: 28  IVFALVIGWETASRLALIDPLLFSMPSRIVSLLYEHIVAGTLWLHTGVTMFETVLGFLLG 87

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +   + A L   S+RL  +L P L I+ S+P +      +V         +    L ++
Sbjct: 88  TVAGTLLAALLWWSKRLAEILDPFLVILNSMPKVAIGPILIVGLGPNMTSVIAMGMLVSV 147

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
                      T  +Y +   +  +  +V ++F  S WQ+F ++  P ++P +V  + M+
Sbjct: 148 II--------TTMVVYTAFKEVDGNYLKVLQTFSASKWQQFRHVVYPATIPVIVSTLKMN 199

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   W  V+  E +V         G+G  I    +  +   +  ++L +  +  L    +
Sbjct: 200 VGLSWVGVIVGEFLV------SKQGLGYLIIYGFQVFNFNLVFMSLLVIAILATLMYMAV 253

Query: 260 FR 261
            R
Sbjct: 254 ER 255



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 93/243 (38%), Gaps = 13/243 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITM 387
           + F++L     V  ++  +       +   + +     IV+      V   +WL   +TM
Sbjct: 18  KRFIRLTQLAIVFALVIGWETASRLALIDPLLFSMPSRIVSLLYEHIVAGTLWLHTGVTM 77

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           F  V+  ++ ++    +   + +   ++  + PF  +L + P     P+++       L 
Sbjct: 78  FETVLGFLLGTVAGTLLAALLWWSKRLAEILDPFLVILNSMPKVAIGPILIV-----GLG 132

Query: 448 PNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           PN+   + M +  +       V         ++ +V  +F  + W+ +R+++ P   P  
Sbjct: 133 PNMTSVIAMGMLVSVIITTMVVYTAFKEVDGNYLKVLQTFSASKWQQFRHVVYPATIPVI 192

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V+      G +W   IV E        +   GLG  I    +  +F  V + +L++    
Sbjct: 193 VSTLKMNVGLSWVGVIVGEFL------VSKQGLGYLIIYGFQVFNFNLVFMSLLVIAILA 246

Query: 567 LAL 569
             +
Sbjct: 247 TLM 249


>gi|325292427|ref|YP_004278291.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060280|gb|ADY63971.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 272

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 13/213 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q    +      T++   +   IA    + +G++IG+   I + + P      A P    
Sbjct: 65  QYWSPIWKNSLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVAL 124

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++V           +   L     + + I+ NV  G +    + ++V  +        
Sbjct: 125 VPILVIWFGIG----TVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGARKMDI 180

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   PY+      A   A+  S+VSE  +         GLG  ++ +  + + P
Sbjct: 181 MLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVA------SNYGLGNMMSSAQSQFNVP 234

Query: 554 EVVLGVLIM---CCFVLALNRFLWHPLYLYGTR 583
            V  G+L++      + A+  +L   +  +  R
Sbjct: 235 LVFAGLLMLAVEGIVMYAIMAWLEKRMTGWAHR 267



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 103/271 (38%), Gaps = 19/271 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ--ETTVPRDIVDIVPITLDVHSLPQYAS 66
           P I+R  +      L  + +  +  +L++ ++   T +P  +     I      + + + 
Sbjct: 16  PLIARVNWVKAAPWLYTLALFAMWELLVYALKMPPTILPSPVRVGQAIVQYWSPIWKNSL 75

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T         I++            S+ +   L P++    +IP +  +   V++F   
Sbjct: 76  QTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIG 135

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                    + A+   F    + +  ++   L  I  + E+V R+           +G+P
Sbjct: 136 --------TVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGARKMDIMLKVGIP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            SMP    ++ ++++  +   V SE +          G+G+ ++ A  + ++  +   +L
Sbjct: 188 RSMPYFFGSLKIAITLAFVGSVVSETVASN------YGLGNMMSSAQSQFNVPLVFAGLL 241

Query: 247 TMLGVIFLYDQL---LFRPMIVWSNKFRLER 274
            +     +   +   L + M  W+++  + +
Sbjct: 242 MLAVEGIVMYAIMAWLEKRMTGWAHRSTMGQ 272


>gi|254302634|ref|ZP_04969992.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148322826|gb|EDK88076.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 257

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINKIIYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +  +I   + I +     I+  I P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLSLGILIASLLAIIMDSFETINKIIYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|148254140|ref|YP_001238725.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406313|gb|ABQ34819.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 255

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 84/237 (35%), Gaps = 22/237 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------------CIT 386
           R +    +    +V  + +     S GY         V   + +G              T
Sbjct: 5   RTTNEWLLGAAPIVLVLLLWQGLVSFGYAPATLLPPPVQVFLRMGQQLASATFQQDIAAT 64

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +FR+     IA ++ + +GI     P +++ ++P  ++LA  P    +P  +  + + H 
Sbjct: 65  LFRLFAGFAIAVVLGVSIGIAAAVSPPVNAVVRPIVRVLAPLPKVALYPAFLLLLGFNHE 124

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      +L+     + IL +   GA+         A +           ++LP   P  
Sbjct: 125 SK----IMLVAADALFPILLSTYYGATIVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSI 180

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +TG       +     ++E+ +       T GLG  +  +       ++ + ++ + 
Sbjct: 181 LTGCRIGLVISCIVVFLAEMIT------STDGLGHVLVTAARTFQAVDMFVPLITIS 231



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 82/227 (36%), Gaps = 14/227 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L  G+++           P  +   +   L   +  Q  + T  R+ +   I+++
Sbjct: 18  VLVLLLWQGLVSFGYAPATLLPPPVQVFLRMGQQLASATFQQDIAATLFRLFAGFAIAVV 77

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   AA S  +  V+ PI+ ++  +P +      ++     +  K        I  
Sbjct: 78  LGVSIGIAAAVSPPVNAVVRPIVRVLAPLPKVALYPAFLLLLGFNHESK--------IML 129

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +  S Y     + + L   + +         W + +P +MP ++    + + 
Sbjct: 130 VAADALFPILLSTYYGATIVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSILTGCRIGLV 189

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                V  +EMI   D      G+G  +  A +    + +   ++T+
Sbjct: 190 ISCIVVFLAEMITSTD------GLGHVLVTAARTFQAVDMFVPLITI 230


>gi|254504342|ref|ZP_05116493.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222440413|gb|EEE47092.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 254

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 84/245 (34%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            +     +    +  L + W   V    I +        +   T +    +      T++
Sbjct: 3   SSRWITAAPWLWAIGLFVLWEGSVQVFDIPVIILPAPSDIWAATVKYWSPIWKNSVQTLY 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             VV  ++A +  + +G+ IG+   I + + P      + P     P++V          
Sbjct: 63  TTVVGFVMAVVGGMALGLAIGWSRSIYAGLYPIMIGFNSIPKVAVVPILVIWFGIG---- 118

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   +       + I+ NV  G +    + ++V  +           + +P   PY   
Sbjct: 119 TIPAVITAFLIAFFPIVVNVATGLATIEPEMEDVLRALGAKKHDIMLKVGIPRAMPYLFG 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A+  S++SE  +        +GLG  +  +  + + P V  G++ +    + 
Sbjct: 179 SMKVAITLAFVGSVISESIA------ANSGLGYMMQLAQSQFNVPLVWAGLVALAVLGII 232

Query: 569 LNRFL 573
           +   +
Sbjct: 233 MYALM 237



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 94/243 (38%), Gaps = 16/243 (6%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P ++ +  FVL  G + +    +     P DI            + + + +T    +   
Sbjct: 11  PWLWAIGLFVLWEGSVQVFDIPVIILPAPSDIWAATVKYWSP--IWKNSVQTLYTTVVGF 68

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V++++           SR +   L PI+    SIP +  +   V++F            +
Sbjct: 69  VMAVVGGMALGLAIGWSRSIYAGLYPIMIGFNSIPKVAVVPILVIWFGIG--------TI 120

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+   F    + +  ++   L  I  ++E+V R+           +G+P +MP L  +M
Sbjct: 121 PAVITAFLIAFFPIVVNVATGLATIEPEMEDVLRALGAKKHDIMLKVGIPRAMPYLFGSM 180

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++++  +   V SE I          G+G  + LA  + ++  +   ++ +  +  +  
Sbjct: 181 KVAITLAFVGSVISESIAANS------GLGYMMQLAQSQFNVPLVWAGLVALAVLGIIMY 234

Query: 257 QLL 259
            L+
Sbjct: 235 ALM 237


>gi|167565404|ref|ZP_02358320.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia oklahomensis EO147]
          Length = 246

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + +  +  +I+   VG+ IG+   I   + P  ++L   PA    
Sbjct: 41  DWPRLAGSAGNTLKLLGIGFLYGAIVGFLVGVSIGWSRRIGYWVHPVLRVLGPVPATALL 100

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +       + L+   T + +     +G ++  N + +VA +         
Sbjct: 101 PLTFYFFPSSYS----AAAFLIALATGFPVAVLTWSGVASVNNAYYDVARTLGANARFLV 156

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G       ++   + +E+          +GLG Y++ +    S+  
Sbjct: 157 LRVAIPAALPQVFVGLFMGLSASFTVLVTAEMMG------VKSGLGWYLSWAQGWASYVN 210

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      L   L+
Sbjct: 211 MYAALIVMALLFSGLITLLF 230



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  + +    IL         P        I +   D   L   A  T   +    + 
Sbjct: 3   LVALPVGLAAWEILTAKTALLPTPFFAPPQALIEVYADDWPRLAGSAGNTLKLLGIGFLY 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 63  GAIVGFLVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PSSYSAA 114

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  + ++     +V+R+   +       + +P ++P +   + M
Sbjct: 115 AFLIALATGFPVAVLTWSGVASVNNAYYDVARTLGANARFLVLRVAIPAALPQVFVGLFM 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 175 GLSASFTVLVTAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLITL 228

Query: 259 LF 260
           LF
Sbjct: 229 LF 230


>gi|92114056|ref|YP_573984.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91797146|gb|ABE59285.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 255

 Score = 88.8 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 101/259 (38%), Gaps = 18/259 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R++P +  L+A + +   + ++  G+    +P  +  +  +      L  +   T + +
Sbjct: 5   KRLWPAMLGLVALLGLWQGL-VVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITVIEI 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++ + I  L   + A   A+   L   L+PIL I Q+IP+       +++       K++
Sbjct: 64  VAGLFIGCLSGLLTALALARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTAKIV 123

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         Y  L   P+   +++++      ++   + +P ++P L
Sbjct: 124 MATLIIYFPVASTC--------YDGLRQTPQGWLDLAQTLGADRRRRLLRIQLPAALPAL 175

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              M M+ S      V  E +          G+G  +  A     +  +  A+L ++   
Sbjct: 176 ASGMRMAASAAPIGAVIGEWVGSSQ------GLGYLMLNANARMQVDLMFAALLILVTFG 229

Query: 253 FLYDQ---LLFRPMIVWSN 268
                    L R ++ W  
Sbjct: 230 VALYFAMDALMRHLMPWHE 248



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 23/240 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-------------GCITMFR 389
           +L   W  ++  VA+   WQ +        Y     +  +               IT+  
Sbjct: 3   LLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITVIE 62

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           +V  + I  +  +   + +     +   + P   +  A P     P+++  + Y      
Sbjct: 63  IVAGLFIGCLSGLLTALALARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTAKI 122

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +  +L++ F     +      G    P  + ++A +      R    I LP   P   +G
Sbjct: 123 VMATLIIYF----PVASTCYDGLRQTPQGWLDLAQTLGADRRRRLLRIQLPAALPALASG 178

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A   A   +++ E          + GLG  +  +  +     +   +LI+  F +AL
Sbjct: 179 MRMAASAAPIGAVIGEWVG------SSQGLGYLMLNANARMQVDLMFAALLILVTFGVAL 232


>gi|312196907|ref|YP_004016968.1| ABC binding protein permease [Frankia sp. EuI1c]
 gi|311228243|gb|ADP81098.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 309

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 90/273 (32%), Gaps = 21/273 (7%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +       G++R           S  RV   ++     V+      +A  +        
Sbjct: 33  ILAVAAPARGLVRLPTRRPGEAAGSRWRVPRGVERLAGVVLLFAGWQLASSAGWLSPRVL 92

Query: 372 -TYQDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                V+ V W              +++RV+  + +   I + + +  G        +  
Sbjct: 93  AGPSAVVTVGWDLARDGTLWAALQASLWRVLWGLGLGVPIGVVLALASGLTRVGDDLVDA 152

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             Q+L   P     PL++  +             L++ G  + I  N      +    ++
Sbjct: 153 NIQMLRFVPIIGIQPLLILWLGLGET----AKISLIVMGVAFPIYVNTSVAIKSLHPGYR 208

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E+A    ++     R++++PG  P ++ G   A   AW   + +E  +        +G+G
Sbjct: 209 ELADVAGLSRAGLIRHVVIPGALPSFLVGLRLAAAVAWLLLVFAEQLN------AHSGIG 262

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  +        +VL ++I     L  +  +
Sbjct: 263 YLMIRAQTFFQSDVIVLCLVIYALLGLVTDGLI 295



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V +        +L      +  R+L  + + +    V A  +  +R    ++ 
Sbjct: 92  LAGPSAVVTVGWDLARDGTLWAALQASLWRVLWGLGLGVPIGVVLALASGLTRVGDDLVD 151

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             + +++ +PI+G     +++            E A I  I     + +  +   ++ ++
Sbjct: 152 ANIQMLRFVPIIGIQPLLILWLGLG--------ETAKISLIVMGVAFPIYVNTSVAIKSL 203

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++    LS      ++ +P ++P  +  + ++ +  W  +V +E +        
Sbjct: 204 HPGYRELADVAGLSRAGLIRHVVIPGALPSFLVGLRLAAAVAWLLLVFAEQL------NA 257

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
             GIG  +  A        I+  ++    +  + D   +LL R ++ W  
Sbjct: 258 HSGIGYLMIRAQTFFQSDVIVLCLVIYALLGLVTDGLIRLLDRRVLRWQP 307


>gi|94309339|ref|YP_582549.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93353191|gb|ABF07280.1| ABC-type transporter, permease component: TauT family [Cupriavidus
           metallidurans CH34]
          Length = 259

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +V   +A  + + +G+ +G      +   P      A P   F P++V       
Sbjct: 68  TFWTTMVGFGLAIAVGVVLGMLMGSSKLAYAATYPLMTAFNALPKAAFVPILVVWFGLGA 127

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ N+  G +    + ++V              + LP   P+
Sbjct: 128 G----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRRDVLLKVGLPRAMPF 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+      +    G+G  +  +      P    G++++   
Sbjct: 184 FFASLKVAITLAFVGTTVSEM------NAANEGIGYLLVSAGSAMKMPLAFAGLVVIAIM 237

Query: 566 VLALNRFL 573
            + +    
Sbjct: 238 AMGMYELF 245



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 85/241 (35%), Gaps = 17/241 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  L   + +  +P     +  +      +  +A RT    +    +++    V   L  
Sbjct: 32  VACLAFNVSDFILPSPSSIVASMAEYGDVIAAHAWRTFWTTMVGFGLAIAVGVVLGMLMG 91

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S+       P++    ++P   F+   VV+F              AI   F    + + 
Sbjct: 92  SSKLAYAATYPLMTAFNALPKAAFVPILVVWFGLGAGP--------AILTAFLISFFPIM 143

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++   L  +  +LE+V R            +G+P +MP    ++ ++++  +     SE
Sbjct: 144 VNIATGLATLEPELEDVLRVLGAKRRDVLLKVGLPRAMPFFFASLKVAITLAFVGTTVSE 203

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268
           M    +      GIG  +  A     +      ++ +  +     +L   L + M  W++
Sbjct: 204 MNAANE------GIGYLLVSAGSAMKMPLAFAGLVVIAIMAMGMYELFSVLEKRMTGWAH 257

Query: 269 K 269
           +
Sbjct: 258 R 258


>gi|328478216|gb|EGF48044.1| ABC transporter permease [Lactobacillus rhamnosus MTCC 5462]
          Length = 207

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 70/213 (32%), Gaps = 17/213 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391
           ++   L    F +    A+   W +   I    T       +W          I+++R  
Sbjct: 5   KILPWLVPLAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNIAISLYRAT 64

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               I   +   +G+  G    I + +    Q+L   P     PL++  +          
Sbjct: 65  AGFAIGGSVGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGIG----EPA 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              L+  G  + +  N   G      +  E+  ++ ++    +  ++ PG     + G  
Sbjct: 121 KIALVAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPGALANILMGVR 180

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            A G  W   IV+E  S       T+GLG    
Sbjct: 181 YALGVMWTTLIVAETIS------ATSGLGYMAT 207



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 9/194 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLL 81
           LAF++                     V    I+L     LP+  + +  R  +   I   
Sbjct: 13  LAFLMSWQAAVSFNWVTSSLIPAPSTVIQDGISLWQSGELPKNIAISLYRATAGFAIGGS 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    +    + +  +L   + ++++IP L  +   ++      P        A I  
Sbjct: 73  VGFALGLINGLVKPIRALLDSPIQMLRNIPHLSLIPLMIILMGIGEP--------AKIAL 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ M  + YQ +     +L E+ R++ LS    F  +  P ++  ++  +  ++ 
Sbjct: 125 VAIGVMFPMYINTYQGIVGADPELLEMGRAYGLSRRALFTRVVFPGALANILMGVRYALG 184

Query: 202 GGWFFVVASEMIVV 215
             W  ++ +E I  
Sbjct: 185 VMWTTLIVAETISA 198


>gi|319790966|ref|YP_004152606.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593429|gb|ADU34495.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 275

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 14/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++R +   +IA+++ +P+G+ +G        ++       + P++   PL +     
Sbjct: 82  AMTVWRTLQAFVIAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGV 141

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +N       +  FG    ++FN   G           A     + W+ ++ +++    
Sbjct: 142 SDVNK----IAIAAFGALLIVVFNSAYGVINARKQRVMAAKVMGASRWQVFKDVLIWESL 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                G  +A   A    IV+E+          TGLG  I ++ +  +   +   +L   
Sbjct: 198 QPSFVGLRSAVSMALVIVIVAEMFIGSD-----TGLGHRIIDAQQVLNVKSMYAAILAAG 252

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
               ALN      L+L   R +
Sbjct: 253 ALGYALNI-----LFLLAERRI 269



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 97/264 (36%), Gaps = 16/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P +  R+ P I  +  F+    ++ +          P D +  +   L    L    + T
Sbjct: 25  PPLRDRLLPFIGPVALFIAWDLVVRLGFIKPILLPSPADTIAALITGLAGGPLLTDFAMT 84

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L A VI+ +       L   + +    +  ++D  +S P    +   ++ F     
Sbjct: 85  VWRTLQAFVIAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGVSDV 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K+  A   A+  +         F+    + N  +     ++    S WQ F  + +  S
Sbjct: 145 NKIAIAAFGALLIV--------VFNSAYGVINARKQRVMAAKVMGASRWQVFKDVLIWES 196

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +      +  ++S     V+ +EM +  DT     G+G  I  A +  ++ ++  A+L  
Sbjct: 197 LQPSFVGLRSAVSMALVIVIVAEMFIGSDT-----GLGHRIIDAQQVLNVKSMYAAILAA 251

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             + +  + L     R ++ WS +
Sbjct: 252 GALGYALNILFLLAERRIVHWSGR 275


>gi|255022636|ref|ZP_05294622.1| similiar to glycine betaine/carnitine/choline ABC transporter
           [Listeria monocytogenes FSL J1-208]
          Length = 482

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|300856694|ref|YP_003781678.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
           13528]
 gi|300436809|gb|ADK16576.1| predicted ABC transporter, permease component [Clostridium
           ljungdahlii DSM 13528]
          Length = 267

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  ++++++   + I + +   IS  + P+  +L A P     P+
Sbjct: 68  GTLFRHIGITCYETILGFLLSTVLGTIIAILLWWSDFISDVLDPYIVVLNALPKIALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        N    + ++ I  +    + NV  G      D   +  +F  +  +   Y
Sbjct: 128 IIFWAG----NGMSTIIVITILISVIVTIINVFHGFKTVDRDKIRLLKTFGASKLQILTY 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPSSVPTLISALKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDTVM 237

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+      + R +
Sbjct: 238 VSIIILSILAYLMYRAV 254



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 92/246 (37%), Gaps = 15/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRML 73
           I   I  L+AF  +  I   L       T     +    I L    +L ++   T    +
Sbjct: 23  ILSRIIILIAFFALWEIAGDLGWIDPFLTSTPSRMWKNLIKLYAEGTLFRHIGITCYETI 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              ++S +   + A L   S  +  VL P + ++ ++P +      + +  N        
Sbjct: 83  LGFLLSTVLGTIIAILLWWSDFISDVLDPYIVVLNALPKIALAPIIIFWAGNGM------ 136

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I       V     +++     + RD   + ++F  S  Q   YL +P S+P L+
Sbjct: 137 --STIIVITILISVIVTIINVFHGFKTVDRDKIRLLKTFGASKLQILTYLIIPSSVPTLI 194

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++   W  V+  E +V  +      G+G  I    +   L  ++ +++ +  + +
Sbjct: 195 SALKINVGLSWVGVIMGEFLVAKE------GLGFLIIYGGQISQLDTVMVSIIILSILAY 248

Query: 254 LYDQLL 259
           L  + +
Sbjct: 249 LMYRAV 254


>gi|315503773|ref|YP_004082660.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|315410392|gb|ADU08509.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 294

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 13/253 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P    +L S     +        +   V      +          + D+   +   
Sbjct: 27  REKGPSRVRRLWSATWPKFAALALAVAIWQAVVWSGWKEPWALPGPAVVFGDLGDYLLSS 86

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T  R  V    A  + + +G+ +     + + +      L   P+  +FPL 
Sbjct: 87  ALWEGLATTARRAAVGFAAAVAVGLLLGLGVARVKVLRAALGSMITALQTMPSIAWFPLA 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +  +++ G    +   VI G    P        +    G   +RY+
Sbjct: 147 ILLFQLS----EQAIFFVVVLGAAPSVANGVIHGVDYVPPLLVRAGRNLGARGLNLYRYV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P  V G       AW + +  E+     +    T +GA +  + E    P ++ 
Sbjct: 203 IAPAALPAIVAGLKQGWAFAWRSLMAGELLV---VIATRTSIGAQLTYARELSEAPRLMA 259

Query: 558 GVLIMCCFVLALN 570
            ++++    L ++
Sbjct: 260 IMIVILVVGLLVD 272



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 92/256 (35%), Gaps = 15/256 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQ 63
           P  + R          A  L + I   ++    +       P  +   +   L   +L +
Sbjct: 31  PSRVRRLWSATWPKFAALALAVAIWQAVVWSGWKEPWALPGPAVVFGDLGDYLLSSALWE 90

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + T  R       ++    +     A+ + L   L  ++  +Q++P + +    ++ F
Sbjct: 91  GLATTARRAAVGFAAAVAVGLLLGLGVARVKVLRAALGSMITALQTMPSIAWFPLAILLF 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +E A  F +      ++   +   +  +P  L    R+    G   + Y+
Sbjct: 151 QL--------SEQAIFFVVVLGAAPSVANGVIHGVDYVPPLLVRAGRNLGARGLNLYRYV 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P +V  +    +  W  ++A E++VV  T      IG+ +  A +  +   ++ 
Sbjct: 203 IAPAALPAIVAGLKQGWAFAWRSLMAGELLVVIATRTS---IGAQLTYARELSEAPRLMA 259

Query: 244 AMLTMLGVIFLYDQLL 259
            M+ +L V  L D   
Sbjct: 260 IMIVILVVGLLVDTAF 275


>gi|298291048|ref|YP_003692987.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927559|gb|ADH88368.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 249

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 109/261 (41%), Gaps = 15/261 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
            + R+      L   VLV  I  ++         P  +V  +    +  +L    + T  
Sbjct: 3   TATRLLLTAASLAGLVLVWQIAALIA-ASPLLPGPAAVVAAMARAAESGALQANIAITLA 61

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+ ++ +I++           +S +L  +  P + ++ ++P L  +    V+F       
Sbjct: 62  RVAASFLIAMAIGSAIGIALGRSVQLNELFGPWVVVLLNLPALVVIILCYVWFGL----- 116

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E AAI A+  +++ N+  +M +    + RDL+E++R +RL   +    + +P  +P
Sbjct: 117 ---TEAAAITAVAINKIPNVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLVP 173

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
               +    ++  W  V+  E++   +      G+G  +  A +  D+  IL   L    
Sbjct: 174 FFAASARSGLALTWKIVLVVELLGRSN------GVGFELQTAFQLFDVATILAYALAFTA 227

Query: 251 VIFLYDQLLFRPMIVWSNKFR 271
           V+ L +  L +P    +N++R
Sbjct: 228 VVQLIELGLLQPWERRANRWR 248



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 79/251 (31%), Gaps = 10/251 (3%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L         L + W       A  +       +       +   +     IT+ RV  
Sbjct: 6   RLLLTAASLAGLVLVWQIAALIAASPLLPGPAAVVAAMARAAESGALQANIAITLARVAA 65

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +IA  I   +GI +G    ++    P+  +L   PA V   L                
Sbjct: 66  SFLIAMAIGSAIGIALGRSVQLNELFGPWVVVLLNLPALVVIILCYVWFGLTEA----AA 121

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +       +   +  GA+A   D  E+A  + +   +  R + LP + P++   A +
Sbjct: 122 ITAVAINKIPNVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLVPFFAASARS 181

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                W   +V E+        R+ G+G  +  + +      ++   L     V  +   
Sbjct: 182 GLALTWKIVLVVELLG------RSNGVGFELQTAFQLFDVATILAYALAFTAVVQLIELG 235

Query: 573 LWHPLYLYGTR 583
           L  P      R
Sbjct: 236 LLQPWERRANR 246


>gi|289670967|ref|ZP_06492042.1| permease [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 294

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   LAA +R    VL 
Sbjct: 71  LPSALQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + L+F+ +   S +
Sbjct: 241 QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGLVFQAIERLSVR 288



 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L  T   + +  P    +      +  + +I    V   + +  A Q+     +    
Sbjct: 28  PALVATATPMGWQAPPWLRKALVLVVLVAVWEIAARVVGDDLMLPSALQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P   +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPETLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGLVFQAIERLSVRR 289


>gi|90418613|ref|ZP_01226524.1| possible permease protein, ABC-type nitrate/sulfonate/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90336693|gb|EAS50398.1| possible permease protein, ABC-type nitrate/sulfonate/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 218

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 13/208 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +  +       +    +W    +++   V +++     + VGI +G    +    +P+ 
Sbjct: 8   IVRALARLLGSAEFYVNLW---ASLYETAVALLVGGGAGLFVGIALGGSRFLGRAFEPYL 64

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L   P  +FFP+++        +       +      + +  +V  G  A P+    V
Sbjct: 65  YYLGPTPKIIFFPIMIMWFGVGPGSKMA----MGAMSCFFPVALSVAVGMRAIPSILIRV 120

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             SF  +  +    I LP +    V G     G A    +++E        L   GLG  
Sbjct: 121 GQSFRASQAQMVTKIYLPAMREPVVNGFRLGFGIALIGVLLAE------TKLSNQGLGFL 174

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + ++ ++   P +   ++ +    +  N
Sbjct: 175 VIQNYQRFDMPAMYALLIAVFALSILAN 202



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +      A+++              SR LG    P L  +   P + F    +++F   
Sbjct: 27  ASLYETAVALLVGGGAGLFVGIALGGSRFLGRAFEPYLYYLGPTPKIIFFPIMIMWFGVG 86

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+    ++  F         +  S+   +  IP  L  V +SFR S  Q    + +P
Sbjct: 87  PGSKMAMGAMSCFF--------PVALSVAVGMRAIPSILIRVGQSFRASQAQMVTKIYLP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                +V    +        V+ +E      T +   G+G  +    +  D+ A+   ++
Sbjct: 139 AMREPVVNGFRLGFGIALIGVLLAE------TKLSNQGLGFLVIQNYQRFDMPAMYALLI 192

Query: 247 TMLGVIFLYDQLLFR 261
            +  +  L +  + R
Sbjct: 193 AVFALSILANAGISR 207


>gi|332366539|gb|EGJ44285.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1059]
          Length = 506

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 79/198 (39%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++      A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLIIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 11/172 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+ I++      ++ +   A +    P+     L +  +    L     L +  IF   
Sbjct: 38  IPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIYAIF--- 94

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N +   +      +E   +F +T W   +   LP   P  V+G  TA       +
Sbjct: 95  -PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFELPLAMPVIVSGIRTATVMIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 154 TLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|296875553|ref|ZP_06899625.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 15912]
 gi|296433477|gb|EFH19252.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 15912]
          Length = 252

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 98/244 (40%), Gaps = 17/244 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV+  +   L+ + +  +P  +        D   L  ++  T    L  +VI +L    
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +A L    + +  ++ P + ++Q+IP +      V++F            L  +  I  +
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYGM--------LPKLVLIIIT 131

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V+ +  S+     +  +D+  + +  + + +Q   +  +P ++P     + +S+S  + 
Sbjct: 132 VVFPIVVSLLDGFRHCDQDILRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFI 191

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             V SE +          G+G Y+  +    +   + AI+  +  +  +       L +P
Sbjct: 192 STVVSEWLGG------FDGLGVYMIQSKKLFQYDTMFAIIVLISAISLLGMFLVDQLEKP 245

Query: 263 MIVW 266
           ++ W
Sbjct: 246 ILKW 249



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W        +          + +   +D   +I     T+   ++ ++I  ++   
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             I +     ++  + PF  ++   P     P++V    Y      L   +L+I    + 
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYG----MLPKLVLIIITVVFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   +        ++   +  +P   PY+  G   +   A+ +++V
Sbjct: 136 IVVSLLDGFRHCDQDILRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFISTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           SE            GLG Y+ +S +   +  +   ++++    L 
Sbjct: 196 SEWLGGFD------GLGVYMIQSKKLFQYDTMFAIIVLISAISLL 234


>gi|226312686|ref|YP_002772580.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226095634|dbj|BAH44076.1| putative ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 252

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 14/226 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             +  F+LV       L        P   V +    L    +  +   T   +L  + IS
Sbjct: 9   ISIAIFLLVWEAGCRFLGVQPFILPPPSAVIVSLWDLRASLIGVHLWATLKEVLLGLSIS 68

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++F    A    +SR +  ++ P + I Q+IPI+      +++F     GK        I
Sbjct: 69  IVFGISLAFAMIRSRIVERLVYPYIVISQTIPIIALSPVFILWFGYDLSGK--------I 120

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
                   + +  + Y  L +  +++ ++ ++   +  Q F  L +P S+P     + ++
Sbjct: 121 AVTILFTFFPIVVNAYDGLRSTDKEMLQLLKTMGATNGQIFTKLQLPASLPHFFSGLKVA 180

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
                    +     +G+ +    G+G +   A       A+  ++
Sbjct: 181 ------ATYSVAGATIGEWLGASEGLGYFGRRASGNFQAPALFASV 220



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V++ + I+ +  I +   +     +   + P+  +    P     P+ +    Y 
Sbjct: 56  ATLKEVLLGLSISIVFGISLAFAMIRSRIVERLVYPYIVISQTIPIIALSPVFILWFGY- 114

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     + I  T + I+ N   G  +   +  ++  +   T  + +  + LP   P
Sbjct: 115 ---DLSGKIAVTILFTFFPIVVNAYDGLRSTDKEMLQLLKTMGATNGQIFTKLQLPASLP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           ++ +G   A   +   + + E          + GLG +   ++     P +   V
Sbjct: 172 HFFSGLKVAATYSVAGATIGEWLG------ASEGLGYFGRRASGNFQAPALFASV 220


>gi|325673711|ref|ZP_08153402.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|325555732|gb|EGD25403.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 271

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +A  T    L    +SL+  +  A L   S  L    VP+  + Q++PI+      +++F
Sbjct: 69  HAWATLQVTLIGFAVSLVVAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                       L  +  I  +  + M   + +   +  R+   + RS   S WQ+F Y+
Sbjct: 129 GFGL--------LPKVLVIALATFFPMAIGLVEGFASADREAGALLRSMGASKWQQFRYV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + + ++      V +E +          G+G Y+++         +L 
Sbjct: 181 RLPSALPRFFTALRIGVTYAVVGAVFAEYVGASS------GLGIYMSVQKNSFRTDLVLA 234

Query: 244 AML---TMLGVIFLYDQLLFRPMIVW 266
           A+L   T+   ++L    + R +  W
Sbjct: 235 AVLVTATISVALYLCTFAIERVVAPW 260



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   ++ ++   + + + F P +     P   +    P     PL++    + 
Sbjct: 72  ATLQVTLIGFAVSLVVAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFG 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L       L++   T + +   ++ G ++   +   +  S   + W+ +RY+ LP   P
Sbjct: 132 LL----PKVLVIALATFFPMAIGLVEGFASADREAGALLRSMGASKWQQFRYVRLPSALP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + T        A   ++ +E          ++GLG Y++          V+  VL+   
Sbjct: 188 RFFTALRIGVTYAVVGAVFAEYVG------ASSGLGIYMSVQKNSFRTDLVLAAVLVTAT 241

Query: 565 FVLAL 569
             +AL
Sbjct: 242 ISVAL 246


>gi|167574562|ref|ZP_02367436.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia oklahomensis C6786]
          Length = 248

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + +  +  +I+   VG+ IG+   I   + P  ++L   PA    
Sbjct: 43  DWPRLAGSAGNTLRLLGIGFLYGAIVGFLVGVSIGWSRRIGYWVHPVLRVLGPVPATALL 102

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +       + L+   T + +     +G ++  N + +VA +         
Sbjct: 103 PLTFYFFPSSYS----AAAFLIALATGFPVAVLTWSGVASVNNAYYDVARTLGANARFLV 158

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G       ++   + +E+          +GLG Y++ +    S+  
Sbjct: 159 LRVAIPAALPQVFVGLFMGLSASFTVLVTAEMMG------VKSGLGWYLSWAQGWASYVN 212

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      L   L+
Sbjct: 213 MYAALIVMALLFSGLITLLF 232



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  + +    IL         P        I +   D   L   A  T   +    + 
Sbjct: 5   LVALPVGLAAWEILTAKTALLPTPFFAPPQALIEVYADDWPRLAGSAGNTLRLLGIGFLY 64

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 65  GAIVGFLVGVSIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PSSYSAA 116

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  + ++     +V+R+   +       + +P ++P +   + M
Sbjct: 117 AFLIALATGFPVAVLTWSGVASVNNAYYDVARTLGANARFLVLRVAIPAALPQVFVGLFM 176

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 177 GLSASFTVLVTAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLITL 230

Query: 259 LF 260
           LF
Sbjct: 231 LF 232


>gi|307823541|ref|ZP_07653770.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
 gi|307735526|gb|EFO06374.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacter tundripaludum SV96]
          Length = 248

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 111/262 (42%), Gaps = 15/262 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            I+ + F +   LL F+ +   + + L        P  +  +  +      LP +   T 
Sbjct: 1   MINLKRFLSTLSLLVFLGIWQGVAVYL-NSNTLPTPEAVAKVFWLGCVSGQLPFHLGVTL 59

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           LR++ +  +++L       +  ++++L       L I  +IP L  +    V+F      
Sbjct: 60  LRLVVSFSVAMLLGCAIGIVLGRNKKLDAFFDNWLVIFLNIPALVTIILCYVWFGL---- 115

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                E AAI A+  +++ N+  ++ +    + +DL +++R +     +   ++  P   
Sbjct: 116 ----VESAAILAVVINKLPNVIVTIREGTRALDQDLLDMARCYHFGKRKTLIHVIWPQLH 171

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++      ++  W  ++  E++   +      G+G  + L  +  D+ +IL   +  +
Sbjct: 172 PFVMGATRSGLALIWKIILVVELLGRSN------GMGYQLHLFFQLFDVASILAYTVAFV 225

Query: 250 GVIFLYDQLLFRPMIVWSNKFR 271
            VI L + L+ +P+   + ++R
Sbjct: 226 AVIQLIELLILKPLDKKALRWR 247



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 23/249 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCI----------TMFRVVVLI 394
           +   +  +     WQ +   +N     T + V  V WLGC+          T+ R+VV  
Sbjct: 7   FLSTLSLLVFLGIWQGVAVYLNSNTLPTPEAVAKVFWLGCVSGQLPFHLGVTLLRLVVSF 66

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            +A ++   +GI +G    + +    +  +    PA V   L                 L
Sbjct: 67  SVAMLLGCAIGIVLGRNKKLDAFFDNWLVIFLNIPALVTIILCYVWFGLV----ESAAIL 122

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            ++      ++  +  G  A   D  ++A  +H    +   ++I P + P+ +    +  
Sbjct: 123 AVVINKLPNVIVTIREGTRALDQDLLDMARCYHFGKRKTLIHVIWPQLHPFVMGATRSGL 182

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
              W   +V E+        R+ G+G  +    +      ++   +     +  +   + 
Sbjct: 183 ALIWKIILVVELLG------RSNGMGYQLHLFFQLFDVASILAYTVAFVAVIQLIELLIL 236

Query: 575 HPLYLYGTR 583
            PL     R
Sbjct: 237 KPLDKKALR 245


>gi|125717820|ref|YP_001034953.1| choline ABC transporter permease [Streptococcus sanguinis SK36]
 gi|125497737|gb|ABN44403.1| ABC-type choline transporter, membrane-spanning permease, putative
           [Streptococcus sanguinis SK36]
          Length = 506

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ I  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFKLPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +  L++ 
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAVLAILFNS 196

Query: 258 LLFRPMIVWSNKFRLERT 275
           LL      W  K +L   
Sbjct: 197 LL-----KWMEKAKLRTV 209



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ I++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAIYLHSHKKTANWVLQIAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N +   +      +E   +F +T W   +   LP   P  V+G  TA  
Sbjct: 92  AIF----PILENTVTALNGIDPSLEEAGIAFGMTKWERLKKFKLPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAVLAILFNSLL 198


>gi|288555637|ref|YP_003427572.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           pseudofirmus OF4]
 gi|288546797|gb|ADC50680.1| ABC permease nitrate/sulfonate/bicarbonate [Bacillus pseudofirmus
           OF4]
          Length = 246

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 18/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I D + I+L       +   T   +++ +VIS +     A    +   +   L 
Sbjct: 32  MPGPLAITDKL-ISLHSTLFFTHLPATLEVVITGLVISTILGVTVAICMHRCPVIERALY 90

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L I Q+IPI+      V++F             + +        + +T +MY  L + 
Sbjct: 91  PLLVISQTIPIIALAPIFVLWFGYSV--------WSKVVVTVLITFFPITVNMYDGLKST 142

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++L+E+ ++   S +  F  L VP S+P  +  M +++      VV +    +G+ +  
Sbjct: 143 PKELKELFQTMNASPFATFMKLYVPHSLPSFLSGMKVAVPLS---VVGA---AIGEWLGA 196

Query: 222 LPGIGSY---IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             G+G +   +        + A +  +  +  + FL   +L R ++ W
Sbjct: 197 EAGLGYFSRRMMTQFDGAGVFAPIVWLALIGIIGFLLITILERYLLRW 244



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 73/199 (36%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V+  ++I++I+ + V I +   P I   + P   +    P     P+ V    Y 
Sbjct: 56  ATLEVVITGLVISTILGVTVAICMHRCPVIERALYPLLVISQTIPIIALAPIFVLWFGYS 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N+  G  + P + KE+  + + + +  +  + +P   P
Sbjct: 116 ----VWSKVVVTVLITFFPITVNMYDGLKSTPKELKELFQTMNASPFATFMKLYVPHSLP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV---VLGVLI 561
            +++G   A   +   + + E            GLG +      +     V   ++ + +
Sbjct: 172 SFLSGMKVAVPLSVVGAAIGEWLG------AEAGLGYFSRRMMTQFDGAGVFAPIVWLAL 225

Query: 562 MCCFVLALNRFLWHPLYLY 580
           +      L   L   L  +
Sbjct: 226 IGIIGFLLITILERYLLRW 244


>gi|288935038|ref|YP_003439097.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288889747|gb|ADC58065.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 331

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 90/281 (32%), Gaps = 19/281 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F      +   +       + +     G++       + +    +       +    V+ 
Sbjct: 36  FTLAWPDAGRRWPFSEGWALAQFTLGGGLLLLALSYRYWRARGARVRHAGKWLALLPVLF 95

Query: 354 GVAIGIAWQSIGYIVNHFTYQ---------DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            V  G+  +S    V  F            D   ++     ++  + + +++ +      
Sbjct: 96  AVWEGLTAKSAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFIT 155

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG+   I   + P  +LL   P+    PL +                L+   T + +
Sbjct: 156 GLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPV 211

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                +G       + +VA +   +       + +P   P    G     G +++  IV+
Sbjct: 212 TVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVA 271

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           E+          +G+G Y+  +    ++P +   +L+M   
Sbjct: 272 EMVG------VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 306



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 152 GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 203

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 204 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 263

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 264 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 317

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 318 RDRLLSWQ 325


>gi|330962060|gb|EGH62320.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 288

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 96/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPGFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV  TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFVLTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|313637868|gb|EFS03198.1| BilEB [Listeria seeligeri FSL S4-171]
          Length = 504

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +R+   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRIAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     I+   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRIA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + LP   P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|289663579|ref|ZP_06485160.1| permease [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 294

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   LAA +R    VL 
Sbjct: 71  LPSALQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + L+F+ +   + +
Sbjct: 241 QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGLVFQAIERLTVR 288



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 9/293 (3%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
            N +  I      +   L+     L  T   + +  P    +      +  + +I    V
Sbjct: 6   ANAVPPIPPVRSEYEVALTPLDPALVATATPMGWQAPPWLRKALVLVVLVAVWEIAARVV 65

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
              + +  A Q+     +     ++L        ++  +     +  ++   +       
Sbjct: 66  GDDLMLPSALQTARAFYDGLLSGELL---RRVGASLRVLAQGYALGVLLAFVLTALAAST 122

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 +     +    PA    PL +        +    L  +++    W +     AG
Sbjct: 123 RWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAG 178

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P   +    ++ + G R+   +++P   P  ++G       AW   I +E+     
Sbjct: 179 FQAVPETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA- 237

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                 GLG YI ++  +    +V  G+ ++    L +   ++  +     R 
Sbjct: 238 -TSGQGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGLVFQAIERLTVRR 289


>gi|39935698|ref|NP_947974.1| ABC transport permease [Rhodopseudomonas palustris CGA009]
 gi|39649551|emb|CAE28073.1| ABC transport permease protein, possibly for nitrate
           [Rhodopseudomonas palustris CGA009]
          Length = 332

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 16/286 (5%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
               + + S + F+ ++  V  +   L V   H P    ++  +     ++   W  V  
Sbjct: 44  LPDVVPWGSASLFAWITAGVAAIFLALSVT-VHRPGRAGEVLVHYGPWVIVVGIWLAVWE 102

Query: 354 GVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                  W    +             D   ++     T+    +  +   ++   VG+ +
Sbjct: 103 LTTAKFGWLPKPFFSPPHGLLNVYVTDGSRLLICIGYTLRLWALGFLSGIVVGYGVGVAL 162

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+    S    P  +L+   PA  + P                   ++   +   +    
Sbjct: 163 GWSRRFSYWGMPLLKLIGPVPATAWIPCTFYFFPTTFG----ASIFIVALASGIPVAILT 218

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +G  +    + +V            R + +P   P+   G   A   ++   +V+E+  
Sbjct: 219 ASGVGSVNRAYYDVGRILGADSRYLIRRVAIPAAMPHVFVGLFMALYYSFAVLVVAEMLG 278

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                    GLG YI   T    +  V   +LIM      + R L+
Sbjct: 279 ------AKYGLGWYIQFQTAYSGYANVYAALLIMALLCAGIIRLLF 318



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 17/218 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D   L      T        +  ++  +        SRR     +P+L ++  +P   +
Sbjct: 128 TDGSRLLICIGYTLRLWALGFLSGIVVGYGVGVALGWSRRFSYWGMPLLKLIGPVPATAW 187

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  T  +F   +         A+IF +  +    +       + ++ R   +V R     
Sbjct: 188 IPCTFYFFPTTFG--------ASIFIVALASGIPVAILTASGVGSVNRAYYDVGRILGAD 239

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P +MP +   + M++   +  +V +EM+          G+G YI      
Sbjct: 240 SRYLIRRVAIPAAMPHVFVGLFMALYYSFAVLVVAEMLG------AKYGLGWYIQFQTAY 293

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
                +  A+L M  +     +LLF     ++ W   F
Sbjct: 294 SGYANVYAALLIMALLCAGIIRLLFVVRDRLLNWQEGF 331


>gi|330012750|ref|ZP_08307475.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328533710|gb|EGF60403.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 331

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 11/271 (4%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R+     W            L               L       +  +L   W  +    
Sbjct: 46  RWPFSEGWALAQFTLGGGLLLLALSYRYWRARGARVLHAGKWLALLPVLFAVWEGLTAKT 105

Query: 356 AIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           A+  + + +    +    + D   ++     ++  + + +++ +      G+ IG+   I
Sbjct: 106 AVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIGWSQRI 165

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              + P  +LL   P+    PL +                L+   T + +     +G   
Sbjct: 166 GYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPVTVLTWSGVMG 221

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
               + +VA +   +       + +P   P    G     G +++  IV+E+        
Sbjct: 222 IDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVG------ 275

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G+G Y+  +    ++P +   +L+M   
Sbjct: 276 VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 306



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 152 GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 203

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 204 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 263

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 264 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 317

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 318 RDRLLSWQ 325


>gi|307323830|ref|ZP_07603039.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306890279|gb|EFN21256.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 13/220 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V           +     T+      + +A  + IP+G+ +G  P      +   + L
Sbjct: 51  VLVRAVELGGDTAFLNGVGATLEAWATGLALACALAIPLGLLLGSVPAAGQAARVLIEFL 110

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P+    PLV   +       +   + L+ +   W +LFN + G        K+   +
Sbjct: 111 RPVPSVALIPLVSLLLGAG----SETTTALVTYACVWPVLFNTVYGLGETDPLAKDTLRA 166

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F            LP   P+   G   A   A   ++  E+ +         GLG +IA+
Sbjct: 167 FGFGRLAVLLRAGLPSAAPFIAAGVRIAAATALILAVAGEILAGFGE-----GLGIFIAQ 221

Query: 546 STEKGS-FPEVVLGVLIMCCFVLALNRFLW---HPLYLYG 581
           +        +V+ GV+      L +N  L      L+ + 
Sbjct: 222 AGMATDGTRDVLAGVVWAGALGLVVNLALTAVERRLFPWA 261



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 69/214 (32%), Gaps = 17/214 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T     + + ++         L       G     +++ ++ +P +  +    +    
Sbjct: 69  GATLEAWATGLALACALAIPLGLLLGSVPAAGQAARVLIEFLRPVPSVALIPLVSLLLGA 128

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                           +  + VW + F+    L       ++  R+F           G+
Sbjct: 129 G--------SETTTALVTYACVWPVLFNTVYGLGETDPLAKDTLRAFGFGRLAVLLRAGL 180

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + ++ +      VA E++          G+G +IA A    D    + A 
Sbjct: 181 PSAAPFIAAGVRIAAATALILAVAGEILAGFGE-----GLGIFIAQAGMATDGTRDVLAG 235

Query: 246 L----TMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
           +     +  V+ L    + R +  W+ + R  RT
Sbjct: 236 VVWAGALGLVVNLALTAVERRLFPWAPEHRGSRT 269


>gi|319649284|ref|ZP_08003442.1| hypothetical protein HMPREF1013_00046 [Bacillus sp. 2_A_57_CT2]
 gi|317398918|gb|EFV79598.1| hypothetical protein HMPREF1013_00046 [Bacillus sp. 2_A_57_CT2]
          Length = 505

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 25/208 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L A+  ++L         A  +++   ++ +  ++Q++P L  L  
Sbjct: 13  GQLLSVLIEHIQISLIALFFAVLIAIPLGIYLANKQKIAEGIIGVTAVLQTVPSLALLGL 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+    +  +  + Y  +  +   + E +R+  ++  +
Sbjct: 73  LIPLFGIG--------KVPAIIALVVYALLPILRNTYTGIKEVDDSIIEAARAMGMNRRK 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           +   + +P +MP ++  +  +M           +++VG   +    IG+      I L I
Sbjct: 125 RLLKVELPLAMPVIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGELILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +   I+   +    +  L+D LL R
Sbjct: 173 DRNNTALIVLGAIPAAILAILFDMLLRR 200



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A +I IP+GI++  +  I+  I     +L   P+     L++           +
Sbjct: 27  LIALFFAVLIAIPLGIYLANKQKIAEGIIGVTAVLQTVPSLALLGLLIPLFGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G     +   E A +  +   +    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIKEVDDSIIEAARAMGMNRRKRLLKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   +VLG +      +  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGELIL-------LGIDRNNTALIVLGAIPAAILAILFD 195

Query: 571 RFLWH 575
             L  
Sbjct: 196 MLLRR 200


>gi|152970656|ref|YP_001335765.1| ABC-type transport system, permease component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955505|gb|ABR77535.1| ABC-type transport system, permease component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 331

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 91/281 (32%), Gaps = 19/281 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F      +   +       + +     G++       + +    + +     +    V+ 
Sbjct: 36  FTLAWPDAGRRWPFSEGWALAQFTLGGGLLLLALSYRYWRARGARVLHAGKWLALLPVLF 95

Query: 354 GVAIGIAWQSIGYIVNHFTYQ---------DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            V  G+  ++    V  F            D   ++     ++  + + +++ +      
Sbjct: 96  AVWEGLTAKTAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFIT 155

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG+   I   + P  +LL   P+    PL +                L+   T + +
Sbjct: 156 GLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPV 211

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                +G       + +VA +   +       + +P   P    G     G +++  IV+
Sbjct: 212 TVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVA 271

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           E+          +G+G Y+  +    ++P +   +L+M   
Sbjct: 272 EMVG------VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 306



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 152 GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 203

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 204 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 263

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 264 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 317

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 318 RDRLLSWQ 325


>gi|323357697|ref|YP_004224093.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Microbacterium testaceum StLB037]
 gi|323274068|dbj|BAJ74213.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 296

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 81/257 (31%), Gaps = 13/257 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV----NHFTYQDVL 377
             R  F      +     V  +L   W+ V   ++       +          F    V 
Sbjct: 32  ARRRGFGARAASILPPLGVLIVLLGAWYGVSIALSASGKGFLMPMPHEMFTQGFFNPQVG 91

Query: 378 YVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             IW+       V +  + IA +I I   I +     +      +A +L   P     PL
Sbjct: 92  SDIWIALFRTTGVALTGLAIAMVIGIGWAIAMSLARWVERSTYAYAVMLQCIPILALVPL 151

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V     Y  L       ++ +    + ++ N + G  +     +E+        W     
Sbjct: 152 VGFWFGYEFL----ARVIVCVLIALFPMVSNTLFGLQSVDKSQRELFRLQKADKWTVLTK 207

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P    G  T+ G +   +IV +            G+G+ I+    +    E+ 
Sbjct: 208 LTLPAALPSIFVGMRTSAGLSVIGAIVGDYF----FRRGEPGIGSLISNYQSRLQSAELF 263

Query: 557 LGVLIMCCFVLALNRFL 573
             +L  C   +A+  F 
Sbjct: 264 AAILAACLLGVAIFAFF 280



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 16/245 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHS-LPQYASRTTL 70
           I P +  L+  +     ++I L    +     +P ++         V S +     RTT 
Sbjct: 44  ILPPLGVLIVLLGAWYGVSIALSASGKGFLMPMPHEMFTQGFFNPQVGSDIWIALFRTTG 103

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L+ + I+++    +A   + +R +         ++Q IPIL  +     +F   +   
Sbjct: 104 VALTGLAIAMVIGIGWAIAMSLARWVERSTYAYAVMLQCIPILALVPLVGFWFGYEF--- 160

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                LA +       ++ M  +    L ++ +   E+ R  +   W     L +P ++P
Sbjct: 161 -----LARVIVCVLIALFPMVSNTLFGLQSVDKSQRELFRLQKADKWTVLTKLTLPAALP 215

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   M  S        +  +           PGIGS I+          +  A+L    
Sbjct: 216 SIFVGMRTSAGLSVIGAIVGDYF----FRRGEPGIGSLISNYQSRLQSAELFAAILAACL 271

Query: 251 VIFLY 255
           +    
Sbjct: 272 LGVAI 276


>gi|158423575|ref|YP_001524867.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system
           permease component [Azorhizobium caulinodans ORS 571]
 gi|158330464|dbj|BAF87949.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system
           permease component [Azorhizobium caulinodans ORS 571]
          Length = 288

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 85/214 (39%), Gaps = 10/214 (4%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           + +  +   +    +PQ    +   +L    I ++   +  TLA  SR    +L  +  +
Sbjct: 70  ETLTALIDNIANGVIPQRVLVSLQTLLIGYGIGIVLAAILTTLAIGSRLGADLLEALTSM 129

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
              +P +  L   +++F             + IF +  S +W +  + +    ++   + 
Sbjct: 130 FNPLPAIALLPLALIWFGLGQG--------SVIFVLVHSVLWAIALNTHSGFRSVSNTMR 181

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
            V  ++ L G +    + +P + P ++  + +  +  W  ++A+E++    +       G
Sbjct: 182 MVGMNYGLRGLKLVRLILIPAAFPAILTGLKVGWAFAWRTLIAAELVFGVSSGSGGL--G 239

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +I     + +   +   +LT++ +  + + + F
Sbjct: 240 WFIFENRNQLETSNVFAGLLTVILIGLIVENVGF 273



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 6/187 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++  +++   I  ++   +          +  ++    +    PA    PL +     
Sbjct: 89  LVSLQTLLIGYGIGIVLAAILTTLAIGSRLGADLLEALTSMFNPLPAIALLPLALIWFGL 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  +++    W I  N  +G  +  N  + V  ++ + G +  R I++P  F
Sbjct: 149 GQGS----VIFVLVHSVLWAIALNTHSGFRSVSNTMRMVGMNYGLRGLKLVRLILIPAAF 204

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG       AW   I +E+             G +I E+  +     V  G+L + 
Sbjct: 205 PAILTGLKVGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENRNQLETSNVFAGLLTVI 262

Query: 564 CFVLALN 570
              L + 
Sbjct: 263 LIGLIVE 269


>gi|221369162|ref|YP_002520258.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|332560772|ref|ZP_08415090.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|221162214|gb|ACM03185.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|332274570|gb|EGJ19886.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 300

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   I    L+           +  +  ++    L   A  +   +++   + +L
Sbjct: 57  LVVLALAWEIYGRTLNNDLLFPSFSQTIAALWDSVLNGGLLMRALASLKVLVTGYAVGIL 116

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   LA  SR     L  +  +   +P +  L   +++F            ++ +F 
Sbjct: 117 LAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPLALIWFGLGN--------MSLVFV 168

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S  W +  + +     + R L+ V R++ L GW     + +P + P ++  + +  +
Sbjct: 169 LVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITKILIPAAFPSILTGLKIGWA 228

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +       G +I       ++  +   +LT++ +  + + L+F
Sbjct: 229 FAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVFAGLLTVIIIGLVVENLIF 285



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 6/198 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++  +V    +  ++   +             ++    +    PA    PL
Sbjct: 94  GGLLMRALASLKVLVTGYAVGILLAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPL 153

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +      +++    L  +++    W I  N  +G        K V  ++ + GW +   
Sbjct: 154 ALIWFGLGNMS----LVFVLVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITK 209

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P  FP  +TG       AW   I +E+             G +I E+        V 
Sbjct: 210 ILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVF 267

Query: 557 LGVLIMCCFVLALNRFLW 574
            G+L +    L +   ++
Sbjct: 268 AGLLTVIIIGLVVENLIF 285


>gi|290580861|ref|YP_003485253.1| putative ABC transporter permease [Streptococcus mutans NN2025]
 gi|254997760|dbj|BAH88361.1| putative ABC transporter permease protein [Streptococcus mutans
           NN2025]
          Length = 328

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +++     ++  + +   I   + +  GI +G+    +  + P  ++L   P+  F PL 
Sbjct: 126 FILKCDLFSLRLLAISWAIGIALGLLTGILVGWFTSFNYWLDPIVKILGPIPSTAFVPLA 185

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++               L+     + +     +G       + EVA +   T ++   ++
Sbjct: 186 LTAFPTSFA----ASIFLISLSVWFPVTILTNSGIQNVKKTYFEVADTLGATTFQKIAHV 241

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P    G       ++   + +E+           G+G YI    E   +  V  
Sbjct: 242 ALPASLPNVFVGIFNGACTSFITLMTAEMLG------VKYGIGWYINWQREVLGYANVYA 295

Query: 558 GVLIMCCFVLALNRFLWH 575
           G++ +      +   L+ 
Sbjct: 296 GLITIAVTFSLIITLLFK 313



 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +  +  I +    +   L          L PI+ I+  IP   F+   +  F  
Sbjct: 132 LFSLRLLAISWAIGIALGLLTGILVGWFTSFNYWLDPIVKILGPIPSTAFVPLALTAF-- 189

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +  A+IF I  S  + +T      + N+ +   EV+ +   + +QK  ++ +
Sbjct: 190 ------PTSFAASIFLISLSVWFPVTILTNSGIQNVKKTYFEVADTLGATTFQKIAHVAL 243

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+P +   +       +  ++ +EM+ V        GIG YI    +      +   +
Sbjct: 244 PASLPNVFVGIFNGACTSFITLMTAEMLGVK------YGIGWYINWQREVLGYANVYAGL 297

Query: 246 LTMLGVIFLYDQLLFR---PMIVWSNKF 270
           +T+     L   LLF+    ++ W   F
Sbjct: 298 ITIAVTFSLIITLLFKVRDRLLSWQKGF 325


>gi|114769443|ref|ZP_01447069.1| glycine betaine/proline ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550360|gb|EAU53241.1| glycine betaine/proline ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 379

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 82/202 (40%), Gaps = 19/202 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++SA+V+++L     A  AA+S +    ++   D  Q+ P   +L   ++ F    
Sbjct: 189 TLYTVISAVVLAMLIGLPMAIWAARSDKWSRRILLFCDTAQTFPSFIYLLPAIMLFGIN- 247

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  ++A IF+I    +  +     + L  +P ++ E +     S +QK   + +P 
Sbjct: 248 -------DVAVIFSILIFTLVPLVRYTVEGLRGVPPEMTEAADMAGASRFQKLINVQLPL 300

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +      ++   +F V+ +  I   D       +G  +   +   DL       L 
Sbjct: 301 ALPTMAVGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKNFVLGLC 353

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
           +  +   +DQ +    + W+ K
Sbjct: 354 VSLMALTFDQTI----MSWTEK 371



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/391 (13%), Positives = 120/391 (30%), Gaps = 38/391 (9%)

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK--F 270
           +VV    I +PG+G+ +   +    L       +T++ V  + D+L       W  K   
Sbjct: 1   MVVLTAFIGMPGLGAKLLAMMNSFKLGRSFEIGVTIVLVAVMLDRLS----KAWVVKQPV 56

Query: 271 RLERTTGIYPADSWVLYLF----------RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
             ER    +    ++L              +  F   IG           + + K    +
Sbjct: 57  HFERGAPWWERHFFLLAAVVAFFGFLLFSMEVQFADQIGRKQHFSKGKEIDGLIKGFLDI 116

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             ++         L +   + +   + W      +     +           Y  + +  
Sbjct: 117 DGVQAVTGWLRWFLITKVLIPFRDTLLWIPTSSFILFITVFSLWLGGKKPAIYAFLFFCF 176

Query: 381 WL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                      IT++ V+  +++A +I +P+ IW       S +I  F      FP+ ++
Sbjct: 177 VASTGWWDRSVITLYTVISAVVLAMLIGLPMAIWAARSDKWSRRILLFCDTAQTFPSFIY 236

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
               +          ++ +   ++  T   ++   + G    P +  E A     + ++ 
Sbjct: 237 LLPAIMLFGI----NDVAVIFSILIFTLVPLVRYTVEGLRGVPPEMTEAADMAGASRFQK 292

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P    G   A   A+   I++              LG  +  +       
Sbjct: 293 LINVQLPLALPTMAVGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLG 345

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +  +  L +    L  ++ +      +  + 
Sbjct: 346 KNFVLGLCVSLMALTFDQTI----MSWTEKR 372


>gi|126464628|ref|YP_001045741.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126106439|gb|ABN78969.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 303

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   I    L+           +  +  ++    L   A  +   +++   + +L
Sbjct: 60  LVVLALAWEIYGRTLNNDLLFPSFSQTIAALWDSVLNGGLLMRALASLKVLVTGYAVGIL 119

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   LA  SR     L  +  +   +P +  L   +++F            ++ +F 
Sbjct: 120 LAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPLALIWFGLGN--------MSLVFV 171

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S  W +  + +     + R L+ V R++ L GW     + +P + P ++  + +  +
Sbjct: 172 LVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITKILIPAAFPSILTGLKIGWA 231

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +       G +I       ++  +   +LT++ +  + + L+F
Sbjct: 232 FAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVFAGLLTVIIIGLVVENLIF 288



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 6/198 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++  +V    +  ++   +             ++    +    PA    PL
Sbjct: 97  GGLLMRALASLKVLVTGYAVGILLAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPL 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +      +++    L  +++    W I  N  +G        K V  ++ + GW +   
Sbjct: 157 ALIWFGLGNMS----LVFVLVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P  FP  +TG       AW   I +E+             G +I E+        V 
Sbjct: 213 ILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVF 270

Query: 557 LGVLIMCCFVLALNRFLW 574
            G+L +    L +   ++
Sbjct: 271 AGLLTVIIIGLVVENLIF 288


>gi|222081719|ref|YP_002541084.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726398|gb|ACM29487.1| glycine betaine/L-proline ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 283

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 16/231 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           VI ++ I    +    V       +   L    L   + +T   +  A++IS++  F   
Sbjct: 55  VIALVVIFAFSVAGWRVAILAACALGFCLT-ADLWVPSIQTISLVTVAVLISVVIAFPLG 113

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LA+++R +  ++ PILDIMQ++P   +L   V+ F            + AI A     V
Sbjct: 114 ILASRNRSIEALIRPILDIMQTVPPWVYLIPAVMIFSLG--------RVPAIIATIVYGV 165

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             M      +   +P DL+E+ ++   S       + +P + P LV  +   +      V
Sbjct: 166 PPMLRLTTLAFRQVPNDLKELGQAIGASPTSILLKIEIPSAKPTLVVGLNQCILLSLAMV 225

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V + ++  G            +   +   ++   L A L ++ V  L D+L
Sbjct: 226 VLAGLVGAGGLGAE-------VTRGLTRMEMGLGLRAGLCIVAVALLLDRL 269



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 4/214 (1%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            + YS     +P    +      L        E  L       +S         VV    
Sbjct: 5   ILDYSPGVLLAPAVEWLNTNFHPLFATISAVIEAVLNAIEAVLLSLPPYAVIALVVIFAF 64

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
               W+          +     +      T+  V V ++I+ +I  P+GI       I +
Sbjct: 65  SVAGWRVAILAACALGFCLTADLWVPSIQTISLVTVAVLISVVIAFPLGILASRNRSIEA 124

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            I+P   ++   P  V+    V   S       +   +  I      +L          P
Sbjct: 125 LIRPILDIMQTVPPWVYLIPAVMIFSLGR----VPAIIATIVYGVPPMLRLTTLAFRQVP 180

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           ND KE+  +   +       I +P   P  V G 
Sbjct: 181 NDLKELGQAIGASPTSILLKIEIPSAKPTLVVGL 214


>gi|229915806|ref|YP_002884452.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sp. AT1b]
 gi|229467235|gb|ACQ69007.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Exiguobacterium sp. AT1b]
          Length = 501

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +         + +++I++L          + +++    + +  I+Q+IP L  L  
Sbjct: 10  GQLVEALIEHLQLSVVSLLIAVLIAVPLGIWLTRRKKIAETAIGVTAIIQTIPSLALLGL 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               L AI A+    +  +  + +  L  + + L E +R+  +   Q
Sbjct: 70  MIPLVGIG--------ALPAIIALVLYALLPILRNTFTGLNEVDKSLLEAARACGMKPNQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  +  +M        A+   +VG   +        I L I   D 
Sbjct: 122 SLMKVELPLALPVIMAGIRTAM--VLIVGTATLAALVGAGGLGTL-----ILLGINRNDN 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             IL   +    +  L+D LL
Sbjct: 175 YLILLGAIPAAILALLFDFLL 195



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++IA +I +P+GIW+  R  I+        ++   P+     L++  V    L   +
Sbjct: 24  VVSLLIAVLIAVPLGIWLTRRKKIAETAIGVTAIIQTIPSLALLGLMIPLVGIGALPAII 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      IL N   G +       E A +  +   +    + LP   P  + G 
Sbjct: 84  ALVLYALL----PILRNTFTGLNEVDKSLLEAARACGMKPNQSLMKVELPLALPVIMAGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +                +     ++LG +      L  +
Sbjct: 140 RTAMVLIVGTATLAALVGAGGLGTLIL-------LGINRNDNYLILLGAIPAAILALLFD 192

Query: 571 RFLWH 575
             L  
Sbjct: 193 FLLRQ 197


>gi|330502313|ref|YP_004379182.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
 gi|328916599|gb|AEB57430.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina NK-01]
          Length = 271

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL    +     D +           L  Q  + +  R+   + I+ L   V    A   
Sbjct: 44  LLPSASQMVDAIDRLAFTEDKRSGQYLFWQDTASSLQRLGLGLGIAALLGLVLGIAAGSV 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
              G  L P+L ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PLFGAPLSPLLTVLSMIPPLAILPILFIVFGLG--------ELSKVMLIVIGITPCIARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IP +L   +++   + W     L +P  MP L+ ++ + +   W F++A+E I
Sbjct: 156 IEQRAREIPGELLIKAQTLGANSWTLILRLVLPQLMPRLLISLRLMLGSAWLFLIAAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              D      G+G  I L  +   +  IL  ++ +  + +L D  L + +
Sbjct: 216 ASTD------GLGYRIFLVRRYMAMDVILPYVVWITLLAWLMDLGLRQVL 259



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 11/201 (5%)

Query: 378 YVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ W    + + R+ + + IA+++ + +GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWQDTASSLQRLGLGLGIAALLGLVLGIAAGSVPLFGAPLSPLLTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    I  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLGELSK----VMLIVIGITPCIARDIEQRAREIPGELLIKAQTLGANSWTLILR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P  +       G AW   I +E  +       T GLG  I       +   ++
Sbjct: 185 LVLPQLMPRLLISLRLMLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYMAMDVIL 238

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
             V+ +      ++  L   L
Sbjct: 239 PYVVWITLLAWLMDLGLRQVL 259


>gi|262067526|ref|ZP_06027138.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291378789|gb|EFE86307.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 257

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + + F  + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLALGIFFACLLAVIMDGFEMINKIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIIISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  ++L +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHLKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +       + + +     I+  + P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLALGIFFACLLAVIMDGFEMINKIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIIISILDGFRHCDKDAIQLLKLMNASRWQILYHLKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|260495624|ref|ZP_05815748.1| nitrate ABC transporter, permease [Fusobacterium sp. 3_1_33]
 gi|260196807|gb|EEW94330.1| nitrate ABC transporter, permease [Fusobacterium sp. 3_1_33]
          Length = 257

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L     + + +L   + A +      L  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEAFIGLSLGILIASLLAIIMDSFEILNRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM    + + +  +I   + I +     ++  + P        P     P++V  + Y 
Sbjct: 58  ITMLEAFIGLSLGILIASLLAIIMDSFEILNRIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|302869745|ref|YP_003838382.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|302572604|gb|ADL48806.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
          Length = 294

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 80/253 (31%), Gaps = 13/253 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P    +L S     +        V   V      +          + D+   +   
Sbjct: 27  REKGPSRVRRLWSATWPKFAALALAVAVWQAVVWSGWKEPWALPGPAVVFGDLGDYLLSS 86

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T  R  V    A  + + +G+ +     + + +      L   P+  +FPL 
Sbjct: 87  ALWEGLATTARRAAVGFAAAVAVGLLLGLGVARVKVLRAALGSMITALQTMPSIAWFPLA 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +  +++ G    +   VI G    P        +    G   +RY+
Sbjct: 147 ILLFQLS----EQAIFFVVVLGAAPSVANGVIHGVDYVPPLLVRAGRNLGARGLNLYRYV 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P  V G       AW + +  E+     +    T +GA +  + E    P ++ 
Sbjct: 203 IAPAALPAIVAGLKQGWAFAWRSLMAGELLV---VIATRTSIGAQLTYARELSEAPRLMA 259

Query: 558 GVLIMCCFVLALN 570
            ++++    L ++
Sbjct: 260 IMIVILVVGLLVD 272



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
                P  +   +   L   +L +  + T  R       ++    +     A+ + L   
Sbjct: 67  WALPGPAVVFGDLGDYLLSSALWEGLATTARRAAVGFAAAVAVGLLLGLGVARVKVLRAA 126

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L  ++  +Q++P + +    ++ F          +E A  F +      ++   +   + 
Sbjct: 127 LGSMITALQTMPSIAWFPLAILLFQL--------SEQAIFFVVVLGAAPSVANGVIHGVD 178

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P  L    R+    G   + Y+  P ++P +V  +    +  W  ++A E++VV  T 
Sbjct: 179 YVPPLLVRAGRNLGARGLNLYRYVIAPAALPAIVAGLKQGWAFAWRSLMAGELLVVIATR 238

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                IG+ +  A +  +   ++  M+ +L V  L D   
Sbjct: 239 TS---IGAQLTYARELSEAPRLMAIMIVILVVGLLVDTAF 275


>gi|298290237|ref|YP_003692176.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296926748|gb|ADH87557.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 265

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 10/196 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +++    ++ R    +  A ++ + VG+ +         + P  Q+    P +   P+
Sbjct: 66  GDLLYNTARSVSRAAAGLGAAVVVGVVVGLMMAQFRAARLLVNPIVQIFYPMPKSALIPV 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+  +     +      LL+  G    ++     GA          ASS   +       
Sbjct: 126 VMIWLGLGDSSK----ILLIFLGCLLPVVVGTYNGARGVNPFLLWSASSLGASRLDVLHE 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P  + G  TA   ++   + SE        + T G+G  I+   + G +P + 
Sbjct: 182 VVLPAAMPDILNGCRTALAFSFILMVSSEFV------IATDGVGFMISSLGDGGQYPAMF 235

Query: 557 LGVLIMCCFVLALNRF 572
             +  +     A +R 
Sbjct: 236 AAIFFVAGIGFAADRI 251



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 90/251 (35%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +L   +    + +     Q+      +I       L    L    +R+  R  + +  ++
Sbjct: 28  VLVLAVFWEFLGLSGIVSQQMLPGLMEIFAAFVDMLVNGDLLYNTARSVSRAAAGLGAAV 87

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   V   + A+ R   +++ PI+ I   +P    +   +++       K        I 
Sbjct: 88  VVGVVVGLMMAQFRAARLLVNPIVQIFYPMPKSALIPVVMIWLGLGDSSK--------IL 139

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF   +  +    Y     +   L   + S   S       + +P +MP ++     ++
Sbjct: 140 LIFLGCLLPVVVGTYNGARGVNPFLLWSASSLGASRLDVLHEVVLPAAMPDILNGCRTAL 199

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
           +  +  +V+SE +      I   G+G  I+         A+  A+  + G+ F  D++  
Sbjct: 200 AFSFILMVSSEFV------IATDGVGFMISSLGDGGQYPAMFAAIFFVAGIGFAADRIYA 253

Query: 259 -LFRPMIVWSN 268
            L R M+ W  
Sbjct: 254 MLARHMLRWRE 264


>gi|312866870|ref|ZP_07727083.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311097653|gb|EFQ55884.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 252

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 96/244 (39%), Gaps = 17/244 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV+  +   L+ + +  +P  +        D   L  ++  T    L  +VI +L    
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +A L    + +  ++ P + ++Q+IP +      V++F            L  +  I  +
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYGM--------LPKLVLIIIT 131

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V+ +  S      +  +D+  + +  + + +Q   +  +P ++P     + +S+S  + 
Sbjct: 132 VVFPIVVSFLDGFRHCDQDVLRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFI 191

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             V SE +          G+G Y+  +    +   + AI+  +  +  +       L R 
Sbjct: 192 STVVSEWLGG------FDGLGVYMIQSKKLFQYDTMFAIIVLISAISLLGMFLVDQLERT 245

Query: 263 MIVW 266
           ++ W
Sbjct: 246 ILKW 249



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 80/225 (35%), Gaps = 10/225 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W        +          + +   +D   +I     T+   ++ ++I  ++   
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             I +     ++  + PF  ++   P     P++V    Y      L   +L+I    + 
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYG----MLPKLVLIIITVVFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ + + G      D   +        ++   +  +P   PY+  G   +   A+ +++V
Sbjct: 136 IVVSFLDGFRHCDQDVLRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFISTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           SE            GLG Y+ +S +   +  +   ++++    L 
Sbjct: 196 SEWLGGFD------GLGVYMIQSKKLFQYDTMFAIIVLISAISLL 234


>gi|256846267|ref|ZP_05551724.1| nitrate ABC transporter, permease [Fusobacterium sp. 3_1_36A2]
 gi|256718036|gb|EEU31592.1| nitrate ABC transporter, permease [Fusobacterium sp. 3_1_36A2]
          Length = 257

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  RD
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDRD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 79/210 (37%), Gaps = 10/210 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
             + +   +D    ++   ITM   ++ + +  +I   + I +     I+  + P     
Sbjct: 39  LEIANAFVRDKALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINRIVYPLLIFT 98

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     P++V  + Y          +L++  T + I+ +++ G      D  ++   
Sbjct: 99  QTIPTIALAPILVLWLGY----DMTPKIVLIVINTTFPIVISILDGFRHCDRDAIQLLKL 154

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            + + W+   ++ +P    Y+  G   +   A+ +++VSE            GLG ++  
Sbjct: 155 MNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIR 208

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           + +   +  +   ++++    L     +  
Sbjct: 209 AKKAFDYDTMFAIIILVSAISLISMELVKR 238


>gi|269120673|ref|YP_003308850.1| binding-protein-dependent transporters inner membrane component
           [Sebaldella termitidis ATCC 33386]
 gi|268614551|gb|ACZ08919.1| binding-protein-dependent transport systems inner membrane
           component [Sebaldella termitidis ATCC 33386]
          Length = 254

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 84/199 (42%), Gaps = 14/199 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L ++A  T    L+  + +++   +   L    R L  +L P++ I Q +P++   
Sbjct: 51  DKSVLGEHALITFGEALAGFIAAVISGIILGGLLGYFRLLRNILYPLILISQMVPLIAVA 110

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F            +  I  + T  ++    S    L NI  +L  + ++ + + 
Sbjct: 111 PVILIWFG--------FGIMPKILIVLTVCIFPCILSFLDGLDNIDNELISLMKTMKANE 162

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F+ L +P S+  L+  + +S     + ++ +   V+G+ +    G+G Y+  AI   
Sbjct: 163 IQIFFKLKLPASLQSLLSGLKIS---AVYSIMGA---VIGEWLGAEKGLGIYMTRAISSF 216

Query: 237 DLLAILYAMLTMLGVIFLY 255
              A+  ++  ++ +    
Sbjct: 217 RTDALFASIFLIIILSLAV 235



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + D   +     IT    +   I A I  I +G  +G+   + + + P   +   
Sbjct: 44  VISVLWNDKSVLGEHALITFGEALAGFIAAVISGIILGGLLGYFRLLRNILYPLILISQM 103

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P+++    +      +   L+++    +  + + + G     N+   +  +  
Sbjct: 104 VPLIAVAPVILIWFGFG----IMPKILIVLTVCIFPCILSFLDGLDNIDNELISLMKTMK 159

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
               + +  + LP      ++G   +   +   +++ E            GLG Y+  + 
Sbjct: 160 ANEIQIFFKLKLPASLQSLLSGLKISAVYSIMGAVIGEWLGAEK------GLGIYMTRAI 213

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                  +   + ++    LA+
Sbjct: 214 SSFRTDALFASIFLIIILSLAV 235


>gi|330468083|ref|YP_004405826.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328811054|gb|AEB45226.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 290

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 80/270 (29%), Gaps = 22/270 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
                    G +    P  + Q   N R            +  +A  +  +         
Sbjct: 7   RPSAPTSPSGQLLRPPPPTWSQRLRNNRWLSFYTSPLLIALFLLAWKLYVEITDLSRFVL 66

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------------RPHISSKIQ 419
              + ++  ++  IT   V    I  +   + +G+ +               P      +
Sbjct: 67  PPPEAVFTSFIEQITDPFVWQTHIWTTFYEVMMGLALAIVLGVGLGLLIGKSPLFDRIAR 126

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           PF       P     PL +  + +   +  +  +LL      + +L N   G  + P   
Sbjct: 127 PFIVATQVVPKVALVPLFILWLGFGPSSKVVMAALL----AFFPLLINTSFGIRSVPGSM 182

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            ++ ++   + W  +    LP   P+ + G   A   A   +IV E            GL
Sbjct: 183 HDLMTTLKASRWERFWRADLPYTMPFILAGMELAVVQATIGAIVGEYLGGDK------GL 236

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G Y           ++   +LIM  F   L
Sbjct: 237 GRYAVNLQNGLQVDKLFGAILIMALFGFTL 266



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 27/281 (9%)

Query: 8   PPFISRRIFPNIFD--------LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--LD 57
           PP  S+R+  N +         +  F+L   +   +    +    P + V    I    D
Sbjct: 23  PPTWSQRLRNNRWLSFYTSPLLIALFLLAWKLYVEITDLSRFVLPPPEAVFTSFIEQITD 82

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
                 +   T   ++  + ++++       L  KS     +  P +   Q +P +  + 
Sbjct: 83  PFVWQTHIWTTFYEVMMGLALAIVLGVGLGLLIGKSPLFDRIARPFIVATQVVPKVALVP 142

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++       KV+ A L A F         +  +    + ++P  + ++  + + S W
Sbjct: 143 LFILWLGFGPSSKVVMAALLAFF--------PLLINTSFGIRSVPGSMHDLMTTLKASRW 194

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++FW   +P++MP ++  M +++      V A+   +VG+ +    G+G Y         
Sbjct: 195 ERFWRADLPYTMPFILAGMELAV------VQATIGAIVGEYLGGDKGLGRYAVNLQNGLQ 248

Query: 238 LLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERT 275
           +  +  A+L M    F    ++    R +I W    +  RT
Sbjct: 249 VDKLFGAILIMALFGFTLYSIVTGARRLLIPWHESVQPRRT 289


>gi|118444719|ref|YP_877785.1| ABC transporter permease [Clostridium novyi NT]
 gi|118135175|gb|ABK62219.1| ABC transporter, permease protein, cysTW family, putative
           [Clostridium novyi NT]
          Length = 269

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT F  ++  ++++II   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIYITCFETILGFLLSTIIGTIIAILLWWSDFACKVLDPYLVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    + N+++G      D  ++  +F  +  +  RY
Sbjct: 128 IIFWVG----NGTSAIVLITVLISIVVTILNILSGFKEIDEDKIKLLKTFGASKCQILRY 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LVIPATIPTIIASLKINVGLSWVGVIMGEFL------VAKNGLGFLIIFGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLALNRFL 573
           + +LI+      +   +
Sbjct: 238 MSILILSILAFLMYELV 254



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 87/218 (39%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   ++S +   + A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIYITCFETILGFLLSTIIGTIIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N     V+   L +I             ++      I
Sbjct: 111 PYLVVLNALPKVALAPIIIFWVGNGTSAIVLITVLISIVV--------TILNILSGFKEI 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  S  Q   YL +P ++P ++ ++ +++   W  V+  E +V  +    
Sbjct: 163 DEDKIKLLKTFGASKCQILRYLVIPATIPTIIASLKINVGLSWVGVIMGEFLVAKN---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  + FL  +L+
Sbjct: 219 --GLGFLIIFGGQISQLDMVMMSILILSILAFLMYELV 254


>gi|118467860|ref|YP_886840.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169147|gb|ABK70043.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner
           membrane subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 288

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 102/280 (36%), Gaps = 25/280 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV--- 368
              +  R+        P   +          +L I +F  V  +A   A   +  +    
Sbjct: 18  RTSRAARSGVPRYVRPPATRVLALPAGVWRLILIIAFFGGVEILAQSGAVPRLSLVPVSE 77

Query: 369 ----NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                     D  +++     +   VVV  ++AS + + V   +     + S ++P+  +
Sbjct: 78  MAVQAGELLTDTDFLVNDLLRSAGIVVVSFVVASGLGVAVAYLMWRSAVVRSALEPYLSV 137

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
             A P    +P++V             + +L    +   ++ N +AG  + P    ++  
Sbjct: 138 FYAVPTFAVYPILVVLFGVG----VWPIVVLASTFSIVVVILNSLAGFDSVPEVVSKLDR 193

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S  +T W+ +R I+LP   P    G       +  A++  E        L + GLG +IA
Sbjct: 194 SLKLTRWQSFRLILLPSAMPDIAAGVKLCMAYSVIATLAMEFI------LASDGLGNFIA 247

Query: 545 ESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLWHP 576
           ++ +  +  E+   +LI+    L        ALNR  W  
Sbjct: 248 DAYDSFAVAEMYGAILIVGALALIANLGISAALNRLDWRR 287



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDV 58
           Y   P      +   ++ L+  +   G + IL        +    V  + +       D 
Sbjct: 30  YVRPPATRVLALPAGVWRLILIIAFFGGVEILAQSGAVPRLSLVPVSEMAVQAGELLTDT 89

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     R+   ++ + V++       A L  +S  +   L P L +  ++P       
Sbjct: 90  DFLVNDLLRSAGIVVVSFVVASGLGVAVAYLMWRSAVVRSALEPYLSVFYAVPTFAVYPI 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            VV F       V+ A   +I  +          +      ++P  + ++ RS +L+ WQ
Sbjct: 150 LVVLFGVGVWPIVVLASTFSIVVVI--------LNSLAGFDSVPEVVSKLDRSLKLTRWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P +MP +   + + M+      +A E I+  D      G+G++IA A     +
Sbjct: 202 SFRLILLPSAMPDIAAGVKLCMAYSVIATLAMEFILASD------GLGNFIADAYDSFAV 255

Query: 239 LAILYAMLTMLGVIFLYD 256
             +  A+L +  +  + +
Sbjct: 256 AEMYGAILIVGALALIAN 273


>gi|91779632|ref|YP_554840.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692292|gb|ABE35490.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 258

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
           AI   W+++   V+  +  D    ++   +T F      +I++I  + +G+ +G R    
Sbjct: 43  AITTPWRTLERAVHIVSDPDFPASLY---VTAFAFGSAFLISAIGGVCLGMLLGARKLAG 99

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             ++P      + P    +P+V+               +  +      I    +      
Sbjct: 100 DVMEPLMMGFYSIPKVTLYPVVLLAFGLG----LWAKIVFGVMHGIVPITIFTMNAVRNM 155

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  +   A ++ ++ + + R+++LP   P  V G           +++ E+ +       
Sbjct: 156 PPIYTRAARTYRLSPFAFARHVLLPACVPEVVAGLRIGFSLTLLGTLIGEMFA------S 209

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHP 576
            +G+G  +  +  +     ++   L++  F   +N  L  W  
Sbjct: 210 QSGIGHMLMIAMNRSETSTIMALALMLFVFATLVNLLLLAWQR 252



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 95/252 (37%), Gaps = 15/252 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +RR    +  ++   ++  +++ LL     TT  R +   V I  D    P     T
Sbjct: 12  PRHTRRWLDGVVLIVVLAVLWQVLSELLGPDAITTPWRTLERAVHIVSDPD-FPASLYVT 70

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
                SA +IS +       L    +  G V+ P++    SIP +      ++ F     
Sbjct: 71  AFAFGSAFLISAIGGVCLGMLLGARKLAGDVMEPLMMGFYSIPKVTLYPVVLLAFG---- 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              +G     +F +    V  +T     ++ N+P      +R++RLS +    ++ +P  
Sbjct: 127 ---LGLWAKIVFGVMHGIV-PITIFTMNAVRNMPPIYTRAARTYRLSPFAFARHVLLPAC 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +V  + +  S      +  EM           GIG  + +A+   +   I+   L +
Sbjct: 183 VPEVVAGLRIGFSLTLLGTLIGEMFA------SQSGIGHMLMIAMNRSETSTIMALALML 236

Query: 249 LGVIFLYDQLLF 260
                L + LL 
Sbjct: 237 FVFATLVNLLLL 248


>gi|239834906|ref|ZP_04683234.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822969|gb|EEQ94538.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 358

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 10/205 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   ++     +   +    ++ +I     G+ IG+   I   + P  + L   P
Sbjct: 148 EVYLDDWPRLLDSLYNSFKLLASGFVLGAIAGFLTGVSIGWVQAIGYWVHPVLRFLGPIP 207

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    P+                  L+   T + +     +G ++    + +VA +   +
Sbjct: 208 STALLPMAFYFFPSGFS----AAVFLIALATWFPLTVLTWSGVASVDKAYYDVARTLGAS 263

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +P   P+   G     G +++  + +E+          +GLG Y+  +   
Sbjct: 264 QLFLILRVAIPAALPHVFVGLFMGLGASFSVLVAAEMMG------VKSGLGWYLQWAQGW 317

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLW 574
            ++  +   ++IM      L   L+
Sbjct: 318 AAYNNLYGALIIMAIVFSGLITLLF 342



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 99/261 (37%), Gaps = 18/261 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVH 59
           L  + P F  R ++ + + L A  +  G+  +L        VP        + +   D  
Sbjct: 97  LVAVHPVFGKRLVYWSPW-LTALAIFFGVWELLTAKFAVLPVPFFQPPSSLLEVYLDDWP 155

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L      +   + S  V+  +  F+        + +G  + P+L  +  IP    L   
Sbjct: 156 RLLDSLYNSFKLLASGFVLGAIAGFLTGVSIGWVQAIGYWVHPVLRFLGPIPSTALLPMA 215

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +F + +         AA+F I  +  + +T   +  + ++ +   +V+R+   S    
Sbjct: 216 FYFFPSGF--------SAAVFLIALATWFPLTVLTWSGVASVDKAYYDVARTLGASQLFL 267

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P +   + M +   +  +VA+EM+ V        G+G Y+  A       
Sbjct: 268 ILRVAIPAALPHVFVGLFMGLGASFSVLVAAEMMGVKS------GLGWYLQWAQGWAAYN 321

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            +  A++ M  V      LLF
Sbjct: 322 NLYGALIIMAIVFSGLITLLF 342


>gi|77465167|ref|YP_354670.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389585|gb|ABA80769.1| ABC nitrate/sulfonate/bicarbonate transporter family, inner
           membrane subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 303

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   I    L+           +  +  ++    L   A  +   +++   + +L
Sbjct: 60  LVVLALAWEIYGRTLNNDLLFPSFSQTIAALWDSVLNGGLLMRALASLKVLVTGYAVGIL 119

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   LA  SR     L  +  +   +P +  L   +++F            ++ +F 
Sbjct: 120 LAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPLALIWFGLGN--------MSLVFV 171

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S  W +  + +     + R L+ V R++ L GW     + +P + P ++  + +  +
Sbjct: 172 LVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITKILIPAAFPSILTGLKIGWA 231

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +       G +I       ++  +   +LT++ +  + + L+F
Sbjct: 232 FAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVFAGLLTVIIIGLVVENLIF 288



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 6/198 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++  +V    +  ++   +             ++    +    PA    PL
Sbjct: 97  GGLLMRALASLKVLVTGYAVGILLAAVLTALAIASRIGRDFLEIMTSMFNPLPAIALLPL 156

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +      +++    L  +++    W I  N  +G        K V  ++ + GW +   
Sbjct: 157 ALIWFGLGNMS----LVFVLVHSVTWAIALNTHSGFLGVSRTLKMVGRNYGLKGWGFITK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P  FP  +TG       AW   I +E+             G +I E+        V 
Sbjct: 213 ILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIFENKNLLEISNVF 270

Query: 557 LGVLIMCCFVLALNRFLW 574
            G+L +    L +   ++
Sbjct: 271 AGLLTVIIIGLVVENLIF 288


>gi|15890391|ref|NP_356063.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15158612|gb|AAK88848.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 267

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y +V  V      T+  +V+  ++A ++   + + + +     +   P   +L   P   
Sbjct: 51  YNNVPVVFTASLYTLQPMVLGFLVAVVMGTLLALLVVYSRAFEAIFYPLLVILQIIPKIA 110

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +  V +   +      LL+   + + I+ N I    +   D  ++A S+     +
Sbjct: 111 IAPLFIIWVGFGLPSK----ILLVFLLSFFPIVVNSIVAFKSIEPDVYDLAKSYRAGRLK 166

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LPG  P    G   A   +  A++V+E  +  +      GLG  +       + 
Sbjct: 167 IFWKVELPGALPSLFAGFKVAAALSATAAVVAEFVASDN------GLGYLLLNYNGNMNT 220

Query: 553 PEVVLGVLI 561
                 +++
Sbjct: 221 SMTFAVIIV 229



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T   M+   +++++   + A L   SR    +  P+L I+Q IP +      +++  
Sbjct: 61  SLYTLQPMVLGFLVAVVMGTLLALLVVYSRAFEAIFYPLLVILQIIPKIAIAPLFIIWVG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P K        I  +F    + +  +   +  +I  D+ ++++S+R    + FW + 
Sbjct: 121 FGLPSK--------ILLVFLLSFFPIVVNSIVAFKSIEPDVYDLAKSYRAGRLKIFWKVE 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L     ++ +      V +E +   +      G+G  +       +       
Sbjct: 173 LPGALPSLFAGFKVAAALSATAAVVAEFVASDN------GLGYLLLNYNGNMNTSMTFAV 226

Query: 245 MLTMLGVIFL---YDQLLFRPMIVWSNKFRLER 274
           ++ +  +  L     +L+ R  I W    R E 
Sbjct: 227 IIVLSLLGLLLYGIVELIERFAIPWHVSQRRED 259


>gi|33600430|ref|NP_887990.1| transmembrane permease ABC transporter protein [Bordetella
           bronchiseptica RB50]
 gi|33568029|emb|CAE31942.1| probable transmembrane permease ABC transporter protein [Bordetella
           bronchiseptica RB50]
          Length = 264

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   V+   I ++  +  G+W+G  P  S+ + P+ +   + P  +  P+        
Sbjct: 66  VTLSETVLAFFIGTVSGLGFGLWLGLSPGASAILDPYIKAANSMPRVILAPIFGMWFGLG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G         + A        +  R++ LP    
Sbjct: 126 IWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGARRRQLLRHVYLPSATS 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++  
Sbjct: 182 WVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIVVLTA 235

Query: 565 FVLALNRFL 573
           F L L+  +
Sbjct: 236 FALLLDYVV 244



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 17/225 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
              I    +    +  +   T    + A  I  +    +      S     +L P +   
Sbjct: 47  WGRIWAWFVSNGDIYGHLWVTLSETVLAFFIGTVSGLGFGLWLGLSPGASAILDPYIKAA 106

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            S+P +       ++F      KV  A     F +F        F++YQ +  +   L +
Sbjct: 107 NSMPRVILAPIFGMWFGLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLD 158

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R       Q   ++ +P +   +  ++  S+   +   V  E +          G+G 
Sbjct: 159 NARMLGARRRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGY 212

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            I  A    D+  +   ++ +     L D ++    + ++ W  K
Sbjct: 213 LILQAEGTFDVNTVFAGIVVLTAFALLLDYVVGMGEKRLMKWQPK 257


>gi|163733729|ref|ZP_02141171.1| ABC transporter, membrane spanning protein [Roseobacter litoralis
           Och 149]
 gi|161392840|gb|EDQ17167.1| ABC transporter, membrane spanning protein [Roseobacter litoralis
           Och 149]
          Length = 257

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 74/226 (32%), Gaps = 10/226 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  +   + +          +    +     +      T++  ++   +  +I + +G+ 
Sbjct: 22  WEVLCIVLNVSDLVLPRPSEILVTMWTRFPVLWPHILQTLYSTLIGFSLGVMIGVTLGVI 81

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G      +   P     ++ P     P+ V               L  +    + I+ N
Sbjct: 82  VGTSKVAYAVAYPLLVGFSSIPKVAVVPIFVLWFGSGTT----PAILTAMVICVFPIVVN 137

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G +    + ++V  +   +       + LP   PY+      A   A+  +++SE  
Sbjct: 138 IATGLATTEPELEDVLKTLGASKSEILWNVGLPRAMPYFFASLKVAITLAFVGAVLSETV 197

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +         G+G  +  ++       V  G++I+    +AL    
Sbjct: 198 A------SNMGIGNVMMTASSNFQVSLVFAGLIILALMGVALYALF 237



 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 91/238 (38%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F L   ++ I+L  + +  +PR    +V +      L  +  +T    L    + ++
Sbjct: 15  IIGFFLTWEVLCIVL-NVSDLVLPRPSEILVTMWTRFPVLWPHILQTLYSTLIGFSLGVM 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   S+    V  P+L    SIP +  +   V++F +            AI  
Sbjct: 74  IGVTLGVIVGTSKVAYAVAYPLLVGFSSIPKVAVVPIFVLWFGSG--------TTPAILT 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                V+ +  ++   L     +LE+V ++   S  +  W +G+P +MP    ++ ++++
Sbjct: 126 AMVICVFPIVVNIATGLATTEPELEDVLKTLGASKSEILWNVGLPRAMPYFFASLKVAIT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   V SE +          GIG+ +  A     +  +   ++ +  +      L 
Sbjct: 186 LAFVGAVLSETVASN------MGIGNVMMTASSNFQVSLVFAGLIILALMGVALYALF 237


>gi|222099457|ref|YP_002534025.1| ABC transporter, permease protein, cysTW family [Thermotoga
           neapolitana DSM 4359]
 gi|221571847|gb|ACM22659.1| ABC transporter, permease protein, cysTW family [Thermotoga
           neapolitana DSM 4359]
          Length = 243

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 73/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+++  +  ++   + +PVG  +G    +   ++P   ++ A P   +  +V+     
Sbjct: 50  LSTLWKGALSTVVVIAVGLPVGFLMGTSDRVYEFLRPVITVIQAVPVISWLAVVIFLWGI 109

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               P +   L ++       +F  ++G  +      EV   + +   +  + + L  ++
Sbjct: 110 GWQGPVVISILSLLPVA----IFTTVSGVRSVDRKLVEVMRVYRVPRTKVLKEVYLGSLW 165

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ ++    + G  W A +++E            GLG  I+ + +    P V    +   
Sbjct: 166 PFVLSILEVSSGNVWKAIVMAEYLCGD------RGLGVLISWARQYVDVPRVYALTIFTV 219

Query: 564 CFVLALNRFL 573
              ++  R +
Sbjct: 220 ALGISFERLV 229



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 99/239 (41%), Gaps = 15/239 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++  + V  ++++L         P +   ++  T++  +L +    T  +   + V+ +
Sbjct: 6   GIVFVLFVWYLLHLLFPSSLILPGPLETFKVLVETMNRETL-EAFLSTLWKGALSTVVVI 64

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   L   S R+   L P++ ++Q++P++ +L   +  +   + G V+ + L+ + 
Sbjct: 65  AVGLPVGFLMGTSDRVYEFLRPVITVIQAVPVISWLAVVIFLWGIGWQGPVVISILSLLP 124

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                      F+    + ++ R L EV R +R+   +    + +    P ++  + +S 
Sbjct: 125 VAI--------FTTVSGVRSVDRKLVEVMRVYRVPRTKVLKEVYLGSLWPFVLSILEVSS 176

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W  +V +E +          G+G  I+ A +  D+  +    +  + +   +++L+
Sbjct: 177 GNVWKAIVMAEYL------CGDRGLGVLISWARQYVDVPRVYALTIFTVALGISFERLV 229


>gi|332289872|ref|YP_004420724.1| taurine transporter subunit [Gallibacterium anatis UMN179]
 gi|330432768|gb|AEC17827.1| taurine transporter subunit [Gallibacterium anatis UMN179]
          Length = 251

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 14/212 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            IL+  +    +P        +      L Q+   T L +   + +  +F    A L + 
Sbjct: 24  AILVWDLPHYLLPTPSDVFQQLASRHQLLWQHTMVTLLEIFLGLFLGFIFGLFSAILLSI 83

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S R+   L+P+L I Q+IP+       V++       KV    L   F +  +       
Sbjct: 84  SNRIATFLLPLLLISQAIPVFAIAPLLVLWLGYGLASKVAMTILIIYFPVTAAC------ 137

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             Y  L N P    E++++ +++ WQ  + + +P ++P L   + +++S      V  E 
Sbjct: 138 --YDGLRNTPEIWLELAQTMQITRWQMLFKVRLPAALPALASGLRIAVSIAPIGAVIGEW 195

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +          G+G  +  A     +  +  A
Sbjct: 196 VGANQ------GLGYLMLHANARMQVDLMFSA 221



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+  + + + +  I  +   I +     I++ + P   +  A P     PL+V  + Y
Sbjct: 57  MVTLLEIFLGLFLGFIFGLFSAILLSISNRIATFLLPLLLISQAIPVFAIAPLLVLWLGY 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      L++ F     +      G    P  + E+A +  IT W+    + LP   
Sbjct: 117 GLASKVAMTILIIYF----PVTAACYDGLRNTPEIWLELAQTMQITRWQMLFKVRLPAAL 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           P   +G   A   A   +++ E            GLG  +  +  +     +   
Sbjct: 173 PALASGLRIAVSIAPIGAVIGEWVG------ANQGLGYLMLHANARMQVDLMFSA 221


>gi|319936800|ref|ZP_08011212.1| ABC glycine betaine transporter permease [Coprobacillus sp. 29_1]
 gi|319808068|gb|EFW04640.1| ABC glycine betaine transporter permease [Coprobacillus sp. 29_1]
          Length = 517

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 70/174 (40%), Gaps = 15/174 (8%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A++++   +++ I+  + +IP +  L F +       P   IG   +AI A+   
Sbjct: 41  LGIFIAENKKTSPIVLGIVSFLYTIPSISMLGFLI-------PVTGIG-NKSAIIALSLY 92

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  + Y  +  + +D+ E ++    +  Q  + + +P + P ++            
Sbjct: 93  ALLPIIRNTYTGIQGVDKDILEAAKGMGSTRKQILFQIKLPLAFPVILSGFK-------N 145

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             V +  +    + I   G+G  I   I   ++   L   LT+  + FL D L+
Sbjct: 146 MTVMTIALAGIASFIGAGGLGVAIYRGITTNNITMTLAGSLTVAILAFLADFLI 199



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 11/170 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI+I      S  +      L   P+      ++      + +  + LSL  +      
Sbjct: 41  LGIFIAENKKTSPIVLGIVSFLYTIPSISMLGFLIPVTGIGNKSAIIALSLYALL----P 96

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ N   G      D  E A     T  +    I LP  FP  ++G         N +++
Sbjct: 97  IIRNTYTGIQGVDKDILEAAKGMGSTRKQILFQIKLPLAFPVILSGFK-------NMTVM 149

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   +     +   GLG  I       +    + G L +       +  +
Sbjct: 150 TIALAGIASFIGAGGLGVAIYRGITTNNITMTLAGSLTVAILAFLADFLI 199


>gi|313887820|ref|ZP_07821500.1| choline transport system permease protein opuBB [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846163|gb|EFR33544.1| choline transport system permease protein opuBB [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 211

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 79/205 (38%), Gaps = 19/205 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +   +    L    ++ + +L       L  +S++   +++ I  ++Q++P    L
Sbjct: 8   NSGEILSKSMEHLLIATISLALGILVAVPLGILLNRSKQAAKIVMAIASVLQTVPSFALL 67

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F           +  AI A+F   +  +  + Y  +  +  +L + ++   ++ 
Sbjct: 68  ALMIPLFGVG--------KKPAIVALFIYSLLPIMRNTYLGIAGVNENLIDAAKGMGMTR 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            Q  + + +P +MP ++  + +S      W  + A          +   G+G +I   + 
Sbjct: 120 SQILFKVQIPMAMPVIMGGIRLSGVYVLAWTTLAA---------YVGAGGLGDFIFNGLT 170

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              +  +++  + +  +  + D L 
Sbjct: 171 NAIMPMVVWGTIPVTLMAIIVDFLF 195



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 67/204 (32%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +F  ++   ++      +    + + +  ++ +P+GI +      +  +   A +L   P
Sbjct: 3   NFLLENSGEILSKSMEHLLIATISLALGILVAVPLGILLNRSKQAAKIVMAIASVLQTVP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +     L++               + +   +   I+ N   G +    +  + A    +T
Sbjct: 63  SFALLALMIPLFGVG----KKPAIVALFIYSLLPIMRNTYLGIAGVNENLIDAAKGMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + +P   P  + G   +       + ++     G       GLG +I      
Sbjct: 119 RSQILFKVQIPMAMPVIMGGIRLSGVYVLAWTTLAAYVGAG-------GLGDFIFNGLTN 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
              P VV G + +    + ++   
Sbjct: 172 AIMPMVVWGTIPVTLMAIIVDFLF 195


>gi|296131613|ref|YP_003638860.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola sp. JR]
 gi|296030191|gb|ADG80959.1| binding-protein-dependent transport systems inner membrane
           component [Thermincola potens JR]
          Length = 269

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 10/251 (3%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
               + E +L +       ++L +FW   V   AI          +    +Q    ++  
Sbjct: 13  FWAGWKEQWLSVLLPGLTLFLLLVFWEIFVRQAAIEKWLLPSPLQIVQSLWQSKELILQH 72

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+    +  I+A    I     I     +   + P   +    P     PL +    
Sbjct: 73  SLQTLAETALGFIVAVAAGITAATLIDLSTLLRKAVYPLLVISQTIPIIAVAPLFIIWFG 132

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y  L       +++     + I  N+  G      +   + +++  T  + +R + +P  
Sbjct: 133 YGLL----PKVVVVALVCFFPITVNLADGYRQVDPEMLRLMAAWGATRSQVFRIVKIPAA 188

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P++ +G   A   +   +++ E          + GLG  +  S++      V   ++++
Sbjct: 189 MPFFFSGLRIAGTYSVMGAVIGEWLG------ASKGLGILMTRSSQSFLTDRVFATIMVI 242

Query: 563 CCFVLALNRFL 573
               L +   +
Sbjct: 243 SLLSLLVIALI 253



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 94/235 (40%), Gaps = 17/235 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
            I++  +P  +  +  +      + Q++ +T        ++++      ATL   S  L 
Sbjct: 46  AIEKWLLPSPLQIVQSLWQSKELILQHSLQTLAETALGFIVAVAAGITAATLIDLSTLLR 105

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             + P+L I Q+IPI+      +++F      KV+   L   F         +T ++   
Sbjct: 106 KAVYPLLVISQTIPIIAVAPLFIIWFGYGLLPKVVVVALVCFF--------PITVNLADG 157

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
              +  ++  +  ++  +  Q F  + +P +MP     + ++   G + V+ +   V+G+
Sbjct: 158 YRQVDPEMLRLMAAWGATRSQVFRIVKIPAAMPFFFSGLRIA---GTYSVMGA---VIGE 211

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
            +    G+G  +  + +      +   ++ +  +  L   L   L R ++ W  +
Sbjct: 212 WLGASKGLGILMTRSSQSFLTDRVFATIMVISLLSLLVIALIEGLARVVMPWYYR 266


>gi|257126210|ref|YP_003164324.1| substrate-binding region of ABC-type glycine betaine transporter
           [Leptotrichia buccalis C-1013-b]
 gi|257050149|gb|ACV39333.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Leptotrichia buccalis C-1013-b]
          Length = 506

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+VI+L+            +++  +++ +  +MQ++P L  L   +            
Sbjct: 28  FYALVIALIIAIPLGIYLTYKKKIAEIIIGLTAVMQTVPSLALLGLLIPIMGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  +  + Y  +  +       SR+  ++  Q+ + + +P +MP +
Sbjct: 82  --RKPAITALVIYALLPLLRNTYTGINGVDPMYMVASRAMGMNKIQQLFKVQLPLAMPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +          + +I  G     +        L +   ++  IL   +    + 
Sbjct: 140 MAGIRTATVLIIGTATLASLIGAGGLGKLI-------LLGLDRNNMDLILLGAIPSALLA 192

Query: 253 FLYDQLL 259
            L+D +L
Sbjct: 193 VLFDFVL 199



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++IA II IP+GI++ ++  I+  I     ++   P+     L++  +         
Sbjct: 28  FYALVIALIIAIPLGIYLTYKKKIAEIIIGLTAVMQTVPSLALLGLLIPIMGIGRKPAIT 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      +L N   G +     +   + +  +   +    + LP   P  + G 
Sbjct: 88  ALVIYALL----PLLRNTYTGINGVDPMYMVASRAMGMNKIQQLFKVQLPLAMPVIMAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 144 RTATVLIIGTATLASLIGAGGLGKLIL-------LGLDRNNMDLILLGAIPSALLAVLFD 196

Query: 571 RFLWHPL 577
            F+   L
Sbjct: 197 -FVLKKL 202


>gi|297571432|ref|YP_003697206.1| binding-protein-dependent transporters inner membrane component
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931779|gb|ADH92587.1| binding-protein-dependent transport systems inner membrane
           component [Arcanobacterium haemolyticum DSM 20595]
          Length = 250

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 76/206 (36%), Gaps = 12/206 (5%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +V   A+         +V   +   +L   W    T+   V+  + A++I IPVG  I  
Sbjct: 28  LVSAFALPDPVSVFTRLVRGISDGYLLASAWQ---TLHVAVIGSLTAALIGIPVGFGIAH 84

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S+ ++PF     A PA  F PL+V  V Y        + LL +    + I+ N   
Sbjct: 85  FAPFSAALEPFLAASQAIPAVAFAPLLVLWVGYGTT----PIVLLCVLMVVFPIIINTAV 140

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      D    A     +G R   YI  P   P  + G  T    +   ++V E+   G
Sbjct: 141 GVRDVDPDLIAAARLDGASGMRLMSYIEFPLALPGILAGIRTGFTLSVTGAVVGELVIGG 200

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVV 556
                  GLG  ++ +      P + 
Sbjct: 201 QR-----GLGIELSTAQHLTDAPGMF 221



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 68/207 (32%), Gaps = 13/207 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L        P  +   +   +    L   A +T    +   + + L         A    
Sbjct: 28  LVSAFALPDPVSVFTRLVRGISDGYLLASAWQTLHVAVIGSLTAALIGIPVGFGIAHFAP 87

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               L P L   Q+IP + F    V++        V+   L  +F         +  +  
Sbjct: 88  FSAALEPFLAASQAIPAVAFAPLLVLWVGYGTTPIVLLCVLMVVF--------PIIINTA 139

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             + ++  DL   +R    SG +   Y+  P ++PG++  +    +      V  E+++ 
Sbjct: 140 VGVRDVDPDLIAAARLDGASGMRLMSYIEFPLALPGILAGIRTGFTLSVTGAVVGELVIG 199

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
           G       G+G  ++ A    D   + 
Sbjct: 200 GQR-----GLGIELSTAQHLTDAPGMF 221


>gi|296163408|ref|ZP_06846163.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295886349|gb|EFG66212.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 258

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 90/256 (35%), Gaps = 15/256 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +R      +L       V  +L      ++   AI   W+++   V+  +  D    ++ 
Sbjct: 10  VRPRHTRRWLDGVVLIVVLAVLWQVLSEMLGPDAITTPWRTLERAVHIVSDPDFPASLY- 68

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T F      +I++I  + +G+ +G R      ++P      + P    +P+V+    
Sbjct: 69  --VTAFAFGSAFLISAIGGVCLGMLLGARKLAGDVMEPLMMGFYSIPKVTLYPVVLLAFG 126

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      +  +      I    +      P  +   A ++ ++ +   R+++LP  
Sbjct: 127 LG----LWAKIVFGVMHGIVPITIFTMNAVRNMPPIYTRAARTYRLSPFALARHVLLPAC 182

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  V G           +++ E+ +        +G+G  +  +  +     ++   L++
Sbjct: 183 VPEVVAGLRIGFSLTLLGTLIGEMFA------SQSGIGHMLMIAMNRSETSTIMALALML 236

Query: 563 CCFVLALNRFL--WHP 576
             F   +N  L  W  
Sbjct: 237 FVFATLVNLLLLAWQR 252



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 15/252 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P  +RR    +  ++   ++  +++ +L     TT  R +   V I  D    P     T
Sbjct: 12  PRHTRRWLDGVVLIVVLAVLWQVLSEMLGPDAITTPWRTLERAVHIVSDPD-FPASLYVT 70

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
                SA +IS +       L    +  G V+ P++    SIP +      ++ F     
Sbjct: 71  AFAFGSAFLISAIGGVCLGMLLGARKLAGDVMEPLMMGFYSIPKVTLYPVVLLAFG---- 126

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              +G     +F +    V  +T     ++ N+P      +R++RLS +    ++ +P  
Sbjct: 127 ---LGLWAKIVFGVMHGIV-PITIFTMNAVRNMPPIYTRAARTYRLSPFALARHVLLPAC 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P +V  + +  S      +  EM           GIG  + +A+   +   I+   L +
Sbjct: 183 VPEVVAGLRIGFSLTLLGTLIGEMFA------SQSGIGHMLMIAMNRSETSTIMALALML 236

Query: 249 LGVIFLYDQLLF 260
                L + LL 
Sbjct: 237 FVFATLVNLLLL 248


>gi|170016809|ref|YP_001727728.1| glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Leuconostoc citreum KM20]
 gi|169803666|gb|ACA82284.1| Glycine betaine/carnitine/choline ABC transporter, substrate
           binding and permease protein [Leuconostoc citreum KM20]
          Length = 504

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 15/175 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A  + K RR    L+ I  + Q++P L  L   +       P        AA+ A+  
Sbjct: 36  PLAVWSEKHRRYAEWLLQITGVFQTLPSLAVLGLLIPLVGIGTP--------AALIALII 87

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  + Y  L  +P+D     ++  LS  +    + +P +MP ++  +  +     
Sbjct: 88  YALLPIFQNTYLGLTGVPQDTLNAGKALGLSRRRVLRLIQIPLAMPNIIAGIRTATVLII 147

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                + +I  G       G+G +I L I   +   IL   +    +  L  QL+
Sbjct: 148 GTATLASLIGAG-------GLGDFILLGIDRNNTDLILIGAIASAILAILGGQLI 195



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 55/166 (33%), Gaps = 11/166 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+ +W       +  +     +    P+     L++  V        + L +  +     
Sbjct: 36  PLAVWSEKHRRYAEWLLQITGVFQTLPSLAVLGLLIPLVGIGTPAALIALIIYALL---- 91

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G +  P D      +  ++  R  R I +P   P  + G  TA       + 
Sbjct: 92  PIFQNTYLGLTGVPQDTLNAGKALGLSRRRVLRLIQIPLAMPNIIAGIRTATVLIIGTAT 151

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           ++ +   G       GLG +I    ++ +   +++G +      + 
Sbjct: 152 LASLIGAG-------GLGDFILLGIDRNNTDLILIGAIASAILAIL 190


>gi|302189062|ref|ZP_07265735.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 288

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|229085221|ref|ZP_04217464.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-44]
 gi|228698088|gb|EEL50830.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus cereus
           Rock3-44]
          Length = 503

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 75/201 (37%), Gaps = 20/201 (9%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           L ++  +++          +  R+   ++    IMQ+IP        
Sbjct: 14  ELFHALLEHLQISLISLFFAVMIAVPLGIWLTRRERIAEFIIGTSAIMQTIPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ AI A+    +  +  + Y  +  +   L E +++  ++ +++
Sbjct: 67  -LALLGLLIPLVGIGKVPAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSFRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  +M           +++VG   +    IG+     +    + 
Sbjct: 126 LWKVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
              +A++ +  +      L F
Sbjct: 174 RNDHALIVLGAIPAALLALFF 194



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A +I +P+GIW+  R  I+  I   + ++   P+     L++  V        +
Sbjct: 27  LISLFFAVMIAVPLGIWLTRRERIAEFIIGTSAIMQTIPSLALLGLLIPLVGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         E A +  +  +R    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIRELDESLIEAAKAMGMNSFRRLWKVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +VLG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIVLGAIPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 GVL 198


>gi|33593903|ref|NP_881547.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|33563977|emb|CAE43241.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|332383322|gb|AEE68169.1| putative ABC transport proteins, inner membrane component
           [Bordetella pertussis CS]
          Length = 278

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 89/229 (38%), Gaps = 15/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +        +  +LP++ + T +  L    +S+L     A     S  L  V+ 
Sbjct: 64  TSYPSALWPTFFELWNHGNLPRHIAATVMATLVGFGLSMLIGVAVAAALWWSDFLYKVID 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P + F+    ++  + Y    +   +A    I           +Y     +
Sbjct: 124 PFLVVANAMPKIAFVPIFYLWLGSDYAVYGMAVAIAVFVTIMV---------VYAGFRGV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +++ +F  S WQ    + +P S+P L+  + M++      V+      VG+    
Sbjct: 175 DPNKMKLAYTFGASRWQVLTKVILPGSVPTLIAAVKMNIGLALVGVI------VGEFQSA 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  I    +   L  ++ A+  +  +  +   +++R     + ++
Sbjct: 229 DLGLGFLIMNGSQIFKLNIVMTAITLLALISSVMYLVIYRLEAAVARRY 277



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 12/215 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F   +   +      T+   +V   ++ +I + V   + +   +   I PF  +  A P 
Sbjct: 75  FELWNHGNLPRHIAATVMATLVGFGLSMLIGVAVAAALWWSDFLYKVIDPFLVVANAMPK 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             F P+    +   +    + +++ +        +  V AG      +  ++A +F  + 
Sbjct: 135 IAFVPIFYLWLGSDYAVYGMAVAIAVFV-----TIMVVYAGFRGVDPNKMKLAYTFGASR 189

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    +ILPG  P  +       G A    IV E  S         GLG  I   ++  
Sbjct: 190 WQVLTKVILPGSVPTLIAAVKMNIGLALVGVIVGEFQS------ADLGLGFLIMNGSQIF 243

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
               V+  + ++      +   + + L     R  
Sbjct: 244 KLNIVMTAITLLALISSVM-YLVIYRLEAAVARRY 277


>gi|90020770|ref|YP_526597.1| ABC transporter permease [Saccharophagus degradans 2-40]
 gi|89950370|gb|ABD80385.1| binding-protein-dependent transport systems inner membrane
           component [Saccharophagus degradans 2-40]
          Length = 271

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 14/200 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q    +  RML  + I+ L       L      LG  L P++  +  IP +  L    +
Sbjct: 73  WQDTKSSLKRMLMGLAIAALIGLTIGLLTGAIPMLGANLTPLVTAISLIPPMAILPILFI 132

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F           EL+ +  I       MT  +YQ    +PR+    +++      Q   
Sbjct: 133 VFGLG--------ELSKVVLIVIGIAPFMTRDIYQRTKELPREQLVKAQTLGAHSGQIIV 184

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P  +P L+  + +S+   W F++A+E I   D      G+G  I L  +   +  I
Sbjct: 185 RVLLPQILPRLIDAVRLSLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYMSMDVI 238

Query: 242 LYAMLTMLGVIFLYDQLLFR 261
           L  ++ +  + FL D +L R
Sbjct: 239 LPYVIWITFLAFLLDWMLVR 258



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 11/210 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
            +I  +    + +   YV W    + + R+++ + IA++I + +G+  G  P + + + P
Sbjct: 54  HAIDRLAFTPSKRTGEYVFWQDTKSSLKRMLMGLAIAALIGLTIGLLTGAIPMLGANLTP 113

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               ++  P     P++        L+      +L++ G   ++  ++       P +  
Sbjct: 114 LVTAISLIPPMAILPILFIVFGLGELSK----VVLIVIGIAPFMTRDIYQRTKELPREQL 169

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A +      +    ++LP I P  +     + G AW   I +E  +       T GLG
Sbjct: 170 VKAQTLGAHSGQIIVRVLLPQILPRLIDAVRLSLGSAWLFLIAAEAIA------STDGLG 223

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             I       S   ++  V+ +      L+
Sbjct: 224 YRIFLVRRYMSMDVILPYVIWITFLAFLLD 253


>gi|309388576|gb|ADO76456.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 258

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 92/244 (37%), Gaps = 15/244 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           FP I   +  ++   +I   L  I+   +P      + I      L Q++ RT    +  
Sbjct: 12  FPVIIFFVLSLISWELIVRFLE-IKSWILPAPSAIFMEIINTRSLLIQHSFRTLFEAIGG 70

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + IS L   +   +  + + L   L P++ I Q++PI+  +   V++F      K++   
Sbjct: 71  LTISALAGLLVGAIIFRFKILARTLYPLMVISQTVPIVVLIPLLVIWFGFGILPKLLIVI 130

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA  F         +  +    L    +    + ++   S WQ F  L VP ++P +   
Sbjct: 131 LACFF--------PVAVNTVDGLNQADQAKINLLKAMGASTWQIFLKLRVPTALPMIFSG 182

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S +      V +E       +    G+G +I  +        +   +  +     + 
Sbjct: 183 LKISATYSVMAAVVAE------WMGSDLGLGVFIVRSSNSYLTSRVFAGIALVSLFSIIL 236

Query: 256 DQLL 259
            QL+
Sbjct: 237 FQLV 240



 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 75/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     T+F  +  + I+++  + VG  I     ++  + P   +    P  V  PL+V
Sbjct: 56  LIQHSFRTLFEAIGGLTISALAGLLVGAIIFRFKILARTLYPLMVISQTVPIVVLIPLLV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      L   L++I    + +  N + G +        +  +   + W+ +  + 
Sbjct: 116 IWFGFG----ILPKLLIVILACFFPVAVNTVDGLNQADQAKINLLKAMGASTWQIFLKLR 171

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P   +G   +   +  A++V+E            GLG +I  S+       V  G
Sbjct: 172 VPTALPMIFSGLKISATYSVMAAVVAEWMG------SDLGLGVFIVRSSNSYLTSRVFAG 225

Query: 559 VLIMCCFVLALNRFL 573
           + ++  F + L + +
Sbjct: 226 IALVSLFSIILFQLV 240


>gi|91780946|ref|YP_556153.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693606|gb|ABE36803.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 255

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 105/259 (40%), Gaps = 15/259 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RRI P++      ++V   +   LH      V      ++ I     +L Q    T  RM
Sbjct: 5   RRIVPSVLFFAVLIVVWEGMARSLHSPLVPDVRAIYAQLLEIVETGAALVQ-IWVTFSRM 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +++L+         A+S+ +   + P + +  ++P L +    V++F         
Sbjct: 64  ALGFLLALVVALPIGIATARSKAISRFVEPGITLGLTVPGLVWALLCVIWFGTSL----- 118

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L+ + ++    + ++  S+ + + ++  +L E+++ FRL        + +P     +
Sbjct: 119 ---LSPVISVALGVLPSLVISVQEGIRSLSGELVEMTQVFRLKRITVLRKIWLPVLYAFI 175

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V    +  S  W  +V  E+  + D      G+G  +      Q++  ++   +     +
Sbjct: 176 VPGTRVGFSIAWKVIVLVEIFGMSD------GVGYQLNAQFSTQNVEGVIAWTVAFWATM 229

Query: 253 FLYDQLLFRPMIVWSNKFR 271
            + + L+F P+   +N+++
Sbjct: 230 LVVENLIFAPIERHANRWK 248



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 10/252 (3%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            ++  +     +L + W  +   +   +               +    +    +T  R+ 
Sbjct: 5   RRIVPSVLFFAVLIVVWEGMARSLHSPLVPDVRAIYAQLLEIVETGAALVQIWVTFSRMA 64

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +  ++A ++ +P+GI       IS  ++P   L    P  V+  L V       L+P   
Sbjct: 65  LGFLLALVVALPIGIATARSKAISRFVEPGITLGLTVPGLVWALLCVIWFGTSLLSP--- 121

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + +  G    ++ +V  G  +   +  E+   F +      R I LP ++ + V G  
Sbjct: 122 -VISVALGVLPSLVISVQEGIRSLSGELVEMTQVFRLKRITVLRKIWLPVLYAFIVPGTR 180

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   ++ E+           G+G  +       +   V+   +     +L +  
Sbjct: 181 VGFSIAWKVIVLVEIFGMSD------GVGYQLNAQFSTQNVEGVIAWTVAFWATMLVVEN 234

Query: 572 FLWHPLYLYGTR 583
            ++ P+  +  R
Sbjct: 235 LIFAPIERHANR 246


>gi|13475671|ref|NP_107238.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026427|dbj|BAB53024.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 275

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 83/252 (32%), Gaps = 10/252 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R        +            +  +  + W  VV   AI          +         
Sbjct: 13  RPESRFASSWGAATGSWLPAVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWG 72

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    +T   ++   +++ ++ I + + I     +   + P   L    P     P+ 
Sbjct: 73  TLMQATLVTAGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIF 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +    Y  L P + L L++     + +  +++AG  +       + +S   +  +    I
Sbjct: 133 ILWFGYG-LAPKIGLILVI---AFFPVTLSMLAGMQSVDRSLLSLMNSVGASRTQILFRI 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  + G   A   +   +IV E A        + GLG  I  ++ +     V  
Sbjct: 189 RVPHSLPNLMAGTKIAATLSVIGAIVGEFAG------ASDGLGYVIQFASTQLDTALVFA 242

Query: 558 GVLIMCCFVLAL 569
            +L++    +A 
Sbjct: 243 ALLLVSVLGIAF 254



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   +V+    + +  I    +P        +     +L Q    T   +L   ++S++
Sbjct: 35  LLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLVTAGEILFGFLVSVV 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +  +   LG  L P++ + Q++P +      +++F      K        I  
Sbjct: 95  VGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPK--------IGL 146

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T SM   + ++ R L  +  S   S  Q  + + VP S+P L+    ++  
Sbjct: 147 ILVIAFFPVTLSMLAGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIA-- 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                V+ +   +VG+      G+G  I  A  + D   +  A+L +  +   +    ++
Sbjct: 205 -ATLSVIGA---IVGEFAGASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAFYYAAEI 260

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W+ KF 
Sbjct: 261 LERIVVPWAPKFS 273


>gi|111024953|ref|YP_707373.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|111026273|ref|YP_708556.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110823932|gb|ABG99215.1| probable ABC transporter, permease component 2 [Rhodococcus jostii
           RHA1]
 gi|110825116|gb|ABH00398.1| ABC transporter, permease component 2 [Rhodococcus jostii RHA1]
          Length = 271

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 82/251 (32%), Gaps = 12/251 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           RF   + +        +   L   W   +      +       +   +       +    
Sbjct: 22  RFRLSQRWADNVLRILIVIGLIGVW--ALIAATSELVPSPGASMSAVWGLFADGSIYRNL 79

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             TM  V +  +IA+ +  P G  IG    +     P      A P  +FFP+++     
Sbjct: 80  NATMSAVGLGFVIATAVGFPTGYIIGRSKFLGDVFDPIIAGAFAIPRVIFFPILLQIFGL 139

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +   +L  +F     I+ +  AG  A      ++  +   +  +    I++P + 
Sbjct: 140 GLGAQSAMAALAAVF----PIIVSTAAGVRAINPILLKLGRATGASPLQAMSKIVVPAMA 195

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       A+   +++E  +         GLG     +  K   P +   ++++ 
Sbjct: 196 PSLMVGIRIGFSIAFINVLIAEFFA------TRAGLGQMAMLAYGKLDLPTMYGVIMLLV 249

Query: 564 CFVLALNRFLW 574
              L  N  LW
Sbjct: 250 SMALVGNIALW 260



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 14/252 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +S+R   N+  +L  + +IG+  ++    +    P   +  V       S+ +  + T
Sbjct: 23  FRLSQRWADNVLRILIVIGLIGVWALIAATSELVPSPGASMSAVWGLFADGSIYRNLNAT 82

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +    VI+    F    +  +S+ LG V  PI+    +IP + F    +  F     
Sbjct: 83  MSAVGLGFVIATAVGFPTGYIIGRSKFLGDVFDPIIAGAFAIPRVIFFPILLQIFGLGLG 142

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            +   A LAA+F         +  S    +  I   L ++ R+   S  Q    + VP  
Sbjct: 143 AQSAMAALAAVF--------PIIVSTAAGVRAINPILLKLGRATGASPLQAMSKIVVPAM 194

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P L+  + +  S  +  V+ +E            G+G    LA  + DL  +   ++ +
Sbjct: 195 APSLMVGIRIGFSIAFINVLIAEFFA------TRAGLGQMAMLAYGKLDLPTMYGVIMLL 248

Query: 249 LGVIFLYDQLLF 260
           + +  + +  L+
Sbjct: 249 VSMALVGNIALW 260


>gi|299822927|ref|ZP_07054813.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Listeria grayi DSM 20601]
 gi|299816456|gb|EFI83694.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Listeria grayi DSM 20601]
          Length = 504

 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 80/206 (38%), Gaps = 25/206 (12%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +       A+ I+++         A+ +R+   ++ +  I+Q+IP       
Sbjct: 13  GELLTALLQHVQISFIALFIAVIIALPLGIYLARHQRIAEPIIQVAAILQTIPS------ 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    V    L AI A+F   +  +  + Y  +  +   L E S +  ++  +
Sbjct: 67  --LALLGLLIPLVGIGILPAIIALFIYALLPILRNTYTGIKEVDPALVEASEAMGMNRSK 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAI 233
           + + + +P +MP ++  +  +M           ++++G   +    IG+      I L I
Sbjct: 125 RLFKVQLPLAMPVIMAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              D   IL   +    +  ++D +L
Sbjct: 173 DRNDNYLILLGAIPAALLAIVFDAIL 198



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA II +P+GI++     I+  I   A +L   P+     L++  V        L
Sbjct: 27  FIALFIAVIIALPLGIYLARHQRIAEPIIQVAAILQTIPSLALLGLLIPLVGIG----IL 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       IL N   G         E + +  +   +    + LP   P  + G 
Sbjct: 83  PAIIALFIYALLPILRNTYTGIKEVDPALVEASEAMGMNRSKRLFKVQLPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNYLILLGAIPAALLAIVFD 195

Query: 571 RFL 573
             L
Sbjct: 196 AIL 198


>gi|293192809|ref|ZP_06609704.1| ABC transporter, ATP-binding protein [Actinomyces odontolyticus
           F0309]
 gi|292820056|gb|EFF79054.1| ABC transporter, ATP-binding protein [Actinomyces odontolyticus
           F0309]
          Length = 257

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T    V   ++ S++ +P    I     +++ ++PF     A PA    P++V  V Y 
Sbjct: 66  VTGAEAVAGCLLGSVVALPSAYVIYRSRILAAAVEPFLGATQALPAIAIAPILVLWVGYG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++  +  +L++ F     IL + + G      +  E A+    TGW    Y+ LP   P
Sbjct: 126 FMSIVVLCALMVFF----PILVSTVVGLRHIDRELLEAAALDGATGWTMALYMELPLAAP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       +   ++V E+   G      +GLG  + +         + + ++I+C 
Sbjct: 182 AILGGLRNGFALSVTGAVVGEMVMGG------SGLGQVLTQMRNNVDTAGMFVIIIILCT 235

Query: 565 FVLALNRFLWH 575
               L   ++ 
Sbjct: 236 MATLLYTIVYR 246



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 84/245 (34%), Gaps = 14/245 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P IF  +          +          P  ++    + L + S       T    ++  
Sbjct: 16  PVIFLAVLLAGWWLSTTLTGIEAWRLPNPMSVISKGSVILALPSTWHKVQVTGAEAVAGC 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++  +     A +  +SR L   + P L   Q++P +      V++    +        +
Sbjct: 76  LLGSVVALPSAYVIYRSRILAAAVEPFLGATQALPAIAIAPILVLWVGYGF--------M 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  S    L +I R+L E +     +GW    Y+ +P + P ++  +
Sbjct: 128 SIVVLCALMVFFPILVSTVVGLRHIDRELLEAAALDGATGWTMALYMELPLAAPAILGGL 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
               +      V  EM++ G       G+G  +       D   +   ++ +  +  L  
Sbjct: 188 RNGFALSVTGAVVGEMVMGGS------GLGQVLTQMRNNVDTAGMFVIIIILCTMATLLY 241

Query: 257 QLLFR 261
            +++R
Sbjct: 242 TIVYR 246


>gi|289674562|ref|ZP_06495452.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
          Length = 288

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|330899999|gb|EGH31418.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330938732|gb|EGH42278.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330982630|gb|EGH80733.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 288

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|121609086|ref|YP_996893.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121553726|gb|ABM57875.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 255

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  +    +A ++ + +G  IG      + + P      A P     P+ V       
Sbjct: 60  TLWVTLAGFGLAIVVGVLLGFVIGSSRLAYAALYPLMTAFNALPKAALVPIFVVWFGIGA 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ NV  G +    + ++V      T       + LP   PY
Sbjct: 120 G----PAILTAFLISFFPIMVNVATGLATLEPELQDVLRVLGATRRDLLLKVGLPRSLPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      A   A+  + VSE+           G+G  +  +           G++++   
Sbjct: 176 FFGALKVAITLAFVGTTVSEM------TAANEGIGYLLISAGASMQMGLAFAGLIVVGAL 229

Query: 566 VLALNRFL 573
            +A+    
Sbjct: 230 AMAMYALF 237



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 88/255 (34%), Gaps = 17/255 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           + + LL    V+  I   +  + E   P        +      +  +A RT    L+   
Sbjct: 10  SPWLLLLGTTVLWQIICSVFEVSEFIFPSPWAIATQLAEFGSVIAGHAWRTLWVTLAGFG 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++   +   +   SR     L P++    ++P    +   VV+F              
Sbjct: 70  LAIVVGVLLGFVIGSSRLAYAALYPLMTAFNALPKAALVPIFVVWFGIGAGP-------- 121

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI   F    + +  ++   L  +  +L++V R    +       +G+P S+P     + 
Sbjct: 122 AILTAFLISFFPIMVNVATGLATLEPELQDVLRVLGATRRDLLLKVGLPRSLPYFFGALK 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++  +     SEM    +      GIG  +  A     +      ++ +  +      
Sbjct: 182 VAITLAFVGTTVSEMTAANE------GIGYLLISAGASMQMGLAFAGLIVVGALAMAMYA 235

Query: 258 L---LFRPMIVWSNK 269
           L   +      W+++
Sbjct: 236 LFHAIETRTTAWAHR 250


>gi|78045723|ref|YP_361898.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78034153|emb|CAJ21798.1| ABC transporter permease and substrate-binding protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 490

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 19/237 (8%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L ++       +  ++ ++LL       L
Sbjct: 258 QVKLERQSEAAVAARWLGVTPASETDSRLTRLLRHTREHLALVGISLGLALLLALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                +G  +I   G G  I   I+  D+  IL   +    V+ L  Q +F     W
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIP-AAVLALLVQAVFEGAERW 478



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 5/157 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++                 +   +   I+ N  
Sbjct: 320 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTH 375

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 376 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 435

Query: 530 GHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G       TG+         +G+ P  VL +L+   F
Sbjct: 436 GGYGQPILTGIRLDDIGLILEGAIPAAVLALLVQAVF 472


>gi|218248512|ref|YP_002373883.1| glycine betaine ABC transporter substrate binding protein
           [Cyanothece sp. PCC 8801]
 gi|218168990|gb|ACK67727.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. PCC 8801]
          Length = 520

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  + Q      + +  AM  ++        + AK  +L   ++ + + +Q+IP L    
Sbjct: 10  LQEIIQRTVEHLILVSIAMGAAIAVGIPLGIIIAKQPKLADPILGVANAIQTIPSLAIFG 69

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +   +    GK+      AI A+    +  +  + Y  +  + + ++E + +  ++  
Sbjct: 70  FLITVPIIGGIGKIP-----AIVALILYALLPIIRNTYTGIKQVDKGVKEAAIALGMTNR 124

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++  ++  + +S        V    I      I   G+G +I   I   +
Sbjct: 125 QILLLIEIPLALGIILAGVRVS-------TVICVGITTIAAAIGAGGLGVFIFRGISMVN 177

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
              IL   +    +    D 
Sbjct: 178 NQIILAGAIPSAIIALAADW 197



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 8/184 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + +  A  + IP+GI I  +P ++  I   A  +   P+   F  +++      +
Sbjct: 21  LILVSIAMGAAIAVGIPLGIIIAKQPKLADPILGVANAIQTIPSLAIFGFLITVPIIGGI 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +I      I+ N   G        KE A +  +T  +    I +P      
Sbjct: 81  G-KIPAIVALILYALLPIIRNTYTGIKQVDKGVKEAAIALGMTNRQILLLIEIPLALGII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       +++    +     +   GLG +I       +   ++ G +      
Sbjct: 140 LAGVRVS-------TVICVGITTIAAAIGAGGLGVFIFRGISMVNNQIILAGAIPSAIIA 192

Query: 567 LALN 570
           LA +
Sbjct: 193 LAAD 196


>gi|119946032|ref|YP_943712.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864636|gb|ABM04113.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 265

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 92/248 (37%), Gaps = 19/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   ++            P ++   +    DV  L ++   T   ++  + + L 
Sbjct: 32  LIILGLWQAVVVFFEMPSFILPAPLEVFARLLQRYDV--LLKHTLVTAQEIILGLFLGLF 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A      + +   L+PIL   Q+IP+       +++       K++ A L   F 
Sbjct: 90  MGLFFALQMLLFKPVKHWLLPILIASQAIPVFALAPVLMLWLGYGIASKIVMAALIIFFP 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + T          Y  L N P    +++++   + WQ   ++  P S+P L   + +++ 
Sbjct: 150 VTTCC--------YDGLRNTPSGYLDLAQTMGATKWQMLRHIQFPASLPTLASGIRVAV- 200

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
                V+A    + G+ V    G+G  +  A     +  +  A+  +  +  L   +   
Sbjct: 201 -----VIAPIGAIAGEWVGSSEGLGYLMLQANARMMIDEMFAALFILSLLSVLLYFVAEK 255

Query: 259 LFRPMIVW 266
           L +  I W
Sbjct: 256 LLKKFIPW 263



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++   W  VV    +          V     Q    ++    +T   +++ + +   + +
Sbjct: 33  IILGLWQAVVVFFEMPSFILPAPLEVFARLLQRYDVLLKHTLVTAQEIILGLFLGLFMGL 92

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + +     +   + P      A P     P+++  + Y   +  +  +L++ F    
Sbjct: 93  FFALQMLLFKPVKHWLLPILIASQAIPVFALAPVLMLWLGYGIASKIVMAALIIFF---- 148

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +      G    P+ + ++A +   T W+  R+I  P   P   +G   A   A   +I
Sbjct: 149 PVTTCCYDGLRNTPSGYLDLAQTMGATKWQMLRHIQFPASLPTLASGIRVAVVIAPIGAI 208

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             E          + GLG  + ++  +    E+   + I+    + L
Sbjct: 209 AGEWVG------SSEGLGYLMLQANARMMIDEMFAALFILSLLSVLL 249


>gi|33598399|ref|NP_886042.1| putative ABC transport proteins, inner membrane component
           [Bordetella parapertussis 12822]
 gi|33603338|ref|NP_890898.1| putative ABC transport proteins, inner membrane component
           [Bordetella bronchiseptica RB50]
 gi|33574528|emb|CAE39174.1| putative ABC transport proteins, inner membrane component
           [Bordetella parapertussis]
 gi|33577462|emb|CAE34727.1| putative ABC transport proteins, inner membrane component
           [Bordetella bronchiseptica RB50]
          Length = 278

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 88/229 (38%), Gaps = 15/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +        +  +LP++ + T +  L    +S+L     A     S  L  V+ 
Sbjct: 64  TSYPSALWPTFFELWNHGNLPRHIAATVMATLVGFGLSMLIGVAVAAALWWSDFLYKVID 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P + F+    ++  + Y    +   +A    I           +Y     +
Sbjct: 124 PFLVVANAMPKIAFVPIFYLWLGSDYAVYGMAVAIAVFVTIMV---------VYAGFRGV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +++ +F  S WQ    + +P S+P L+  + M++      V+      VG+    
Sbjct: 175 DPNKMKLAYTFGASRWQVLTKVILPGSVPTLIAAVKMNIGLALVGVI------VGEFQSA 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  I    +   L  ++ A+  +  +  +    ++R     + ++
Sbjct: 229 DLGLGFLIMNGSQIFKLNIVMTAITLLALISSVMYLAIYRLEAAVARRY 277



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 12/215 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F   +   +      T+   +V   ++ +I + V   + +   +   I PF  +  A P 
Sbjct: 75  FELWNHGNLPRHIAATVMATLVGFGLSMLIGVAVAAALWWSDFLYKVIDPFLVVANAMPK 134

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             F P+    +   +    + +++ +        +  V AG      +  ++A +F  + 
Sbjct: 135 IAFVPIFYLWLGSDYAVYGMAVAIAVFV-----TIMVVYAGFRGVDPNKMKLAYTFGASR 189

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    +ILPG  P  +       G A    IV E  S         GLG  I   ++  
Sbjct: 190 WQVLTKVILPGSVPTLIAAVKMNIGLALVGVIVGEFQS------ADLGLGFLIMNGSQIF 243

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
               V+  + ++      +   ++  L     R  
Sbjct: 244 KLNIVMTAITLLALISSVMYLAIYR-LEAAVARRY 277


>gi|222151709|ref|YP_002560865.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Macrococcus caseolyticus JCSC5402]
 gi|222120834|dbj|BAH18169.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Macrococcus caseolyticus JCSC5402]
          Length = 214

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L +         L +++ +++       +  KS +L  +++ I  ++Q++P L  L
Sbjct: 8   NQAELLEKTWEHISISLLSLLAAIIVAVPLGIVLTKSDKLAKIVLSITSVLQTVPSLAIL 67

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              + +F            + A+ A+F   +  +  + Y  + ++ +D  E  R+  ++ 
Sbjct: 68  AMMIPFFGIG--------TVPAVIALFLYVLLPILNNTYLGIQSVNKDAREAGRAMGMTQ 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P ++P ++  + +S      +   +  I  G       G+G +I   +   
Sbjct: 120 NQLLRMVELPLAVPVIMSGIRLSAVYAISWATLASYIGAG-------GLGDFIFNGLNLY 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               I+   + +  +  + D +L
Sbjct: 173 QPKLIIVGAVVVTLLALVTDFVL 195



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 70/180 (38%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A I+ +P+GI +     ++  +     +L   P+     +++       +   +
Sbjct: 24  LLSLLAAIIVAVPLGIVLTKSDKLAKIVLSITSVLQTVPSLAILAMMIPFFGIGTVPAVI 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L ++      IL N   G  +   D +E   +  +T  +  R + LP   P  ++G 
Sbjct: 84  ALFLYVLL----PILNNTYLGIQSVNKDAREAGRAMGMTQNQLLRMVELPLAVPVIMSGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A + + ++     G       GLG +I           +++G +++    L  +
Sbjct: 140 RLSAVYAISWATLASYIGAG-------GLGDFIFNGLNLYQPKLIIVGAVVVTLLALVTD 192


>gi|332978069|gb|EGK14807.1| sulfonate ABC superfamily ATP binding cassette transporter,
           membrane protein [Desmospora sp. 8437]
          Length = 279

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I ++    L   +L      T L  +   ++      V ATL   S  L  VL P
Sbjct: 62  SSPVRIWNLFLEMLSGGNLIHDIGVTILETVIGFILGTAAGIVLATLIWASPFLSRVLDP 121

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V F   +   ++      I           T  ++ S  ++ 
Sbjct: 122 YLVVLNSMPKVALGPLFIVTFGAGFGSILMMGVAITIIIT--------TLVIHNSFQSVS 173

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  +++RSF  + WQ +  +  P  +P ++  + +++   W  V+  E +V  +     
Sbjct: 174 TDYLKLARSFGATRWQLYTRIIFPACIPDMIAALKVNVGLAWVGVIVGEFLVSKN----- 228

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  I    +  +L  ++ +++ +     +  + + R
Sbjct: 229 -GLGYLIMYGFQVFNLTLVIMSLVIVAICATVMYEAVSR 266



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I    +T+   V+  I+ +   I +   I   P +S  + P+  +L + P     PL +
Sbjct: 80  LIHDIGVTILETVIGFILGTAAGIVLATLIWASPFLSRVLDPYLVVLNSMPKVALGPLFI 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +  +    + I  T   I  +      +   D+ ++A SF  T W+ +  II
Sbjct: 140 VTFGAGFGSILMMGVAITIIITTLVIHNSF----QSVSTDYLKLARSFGATRWQLYTRII 195

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P  +       G AW   IV E        +   GLG  I    +  +   V++ 
Sbjct: 196 FPACIPDMIAALKVNVGLAWVGVIVGEFL------VSKNGLGYLIMYGFQVFNLTLVIMS 249

Query: 559 VLIMCC 564
           ++I+  
Sbjct: 250 LVIVAI 255


>gi|194292308|ref|YP_002008215.1| nitrate-sulfonate transport system, inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193226212|emb|CAQ72161.1| putative nitrate-sulfonate transport system, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 319

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + + +    +    VG+ IG+   I   + P  ++L   P+    
Sbjct: 114 DWPRLGESALNTLKLLGLGVGYGGLAGFLVGVSIGWSRRIGYWVHPVLRVLGPLPSTALL 173

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +         L+   T + +     +G +     + +VA +   +GW   
Sbjct: 174 PLTFYFFPSSYS----AAVFLIALATAFPVAVLTWSGVAGVNKSYYDVARTLGASGWFLV 229

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G     G +++  + +E+          +GLG Y+  +    S+  
Sbjct: 230 LRVAIPAALPQVFVGLFMGLGASFSVLVTAEMMG------VKSGLGWYLTWAQGWASYVN 283

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      +   L+
Sbjct: 284 MYAALIVMALLFSGVITLLF 303



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 92/242 (38%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  + +    IL         P        I +   D   L + A  T   +   +  
Sbjct: 76  LVALPVALSAWEILTAKTAILPTPFFAPPQALIEVYADDWPRLGESALNTLKLLGLGVGY 135

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 136 GGLAGFLVGVSIGWSRRIGYWVHPVLRVLGPLPSTALLPLTFYFF--------PSSYSAA 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I  +  + +    +  +  + +   +V+R+   SGW     + +P ++P +   + M
Sbjct: 188 VFLIALATAFPVAVLTWSGVAGVNKSYYDVARTLGASGWFLVLRVAIPAALPQVFVGLFM 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +V +EM+ V        G+G Y+  A      + +  A++ M  +      L
Sbjct: 248 GLGASFSVLVTAEMMGVKS------GLGWYLTWAQGWASYVNMYAALIVMALLFSGVITL 301

Query: 259 LF 260
           LF
Sbjct: 302 LF 303


>gi|148253998|ref|YP_001238583.1| putative alkanesulfonate ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146406171|gb|ABQ34677.1| putative alkanesulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 334

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 16/239 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI------VNHFTYQDVLYVIWLGCIT 386
            L    R ++++ I  F  V  +A                 +      ++  +      +
Sbjct: 81  PLRVAHRAAWLIVIGLFLTVWELASAKFRWLPLPFFPPPQELLEVYTDELPKLAENVAAS 140

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
              +V    I + +    G+ IG+       + P  +L+   PA  + P+          
Sbjct: 141 AKLLVTGYAIGAALGFVTGVSIGWSVTAGYWVHPLLRLIGPLPATAWLPIAFFAFPSGWS 200

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                   L+     + +     +G ++ P  + +V  +     W     + +P   P+ 
Sbjct: 201 G----SIFLIALAAGFPVTVLTWSGIASVPTAYYDVTRTLGGGPWFLVFRVAIPAALPHV 256

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             G   A G A++  +V+E+           G+G Y+ ++    S+  V   ++++   
Sbjct: 257 FVGLFMALGSAFSVLMVAELLG------VKAGIGFYLQKAQGWASYGNVYAALVVLALL 309



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 80/200 (40%), Gaps = 14/200 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +  + +   +++   I     FV       S   G  + P+L ++  +P   +L    
Sbjct: 133 LAENVAASAKLLVTGYAIGAALGFVTGVSIGWSVTAGYWVHPLLRLIGPLPATAWLPIAF 192

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F + + G        +IF I  +  + +T   +  + ++P    +V+R+     W   
Sbjct: 193 FAFPSGWSG--------SIFLIALAAGFPVTVLTWSGIASVPTAYYDVTRTLGGGPWFLV 244

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P +   + M++   +  ++ +E++ V        GIG Y+  A        
Sbjct: 245 FRVAIPAALPHVFVGLFMALGSAFSVLMVAELLGVKA------GIGFYLQKAQGWASYGN 298

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           +  A++ +  +      +LF
Sbjct: 299 VYAALVVLALLCSGTITILF 318


>gi|307243880|ref|ZP_07526005.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492702|gb|EFM64730.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 253

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 72/199 (36%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +     +T+   V+ + ++ +I + +G+ + F P I     P   +    P     
Sbjct: 54  DWQVLAMHSRVTLEETVIGLSLSVLISLFIGMIMDFVPFIKKCFHPIMYVTQMIPTITIA 113

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V    +   +      + +I    + +L N + G  +   D   +           +
Sbjct: 114 PLLVIWFGFGIKSK----VICVILTCFFPMLINFMDGMDSIDRDLINLFKIMKAKRLDTF 169

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++  P     + TG   +   A+ A+ V+E          + GLG Y+  +    +  +
Sbjct: 170 IHLKFPMAMDKFFTGLKISSTYAFIAATVAEWLGG------SAGLGVYMVRAKSSYALDK 223

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V    +++  F L     +
Sbjct: 224 VFACTILVVLFSLLFVGLI 242



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 14/234 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++  + +    I    +P      +    D   L  ++  T    +  + +S+L +  
Sbjct: 23  LIILWELAVDRFSIPSYILPSPRDIYLEFVNDWQVLAMHSRVTLEETVIGLSLSVLISLF 82

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +      +     PI+ + Q IP +      V++F      KVI   L   F     
Sbjct: 83  IGMIMDFVPFIKKCFHPIMYVTQMIPTITIAPLLVIWFGFGIKSKVICVILTCFF----- 137

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M  +    + +I RDL  + +  +      F +L  P +M      + +S +  + 
Sbjct: 138 ---PMLINFMDGMDSIDRDLINLFKIMKAKRLDTFIHLKFPMAMDKFFTGLKISSTYAFI 194

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               +E +          G+G Y+  A     L  +    + ++    L+  L+
Sbjct: 195 AATVAEWLGGSA------GLGVYMVRAKSSYALDKVFACTILVVLFSLLFVGLI 242


>gi|253578372|ref|ZP_04855644.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850690|gb|EES78648.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 262

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 91/237 (38%), Gaps = 15/237 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLG-CITMFRVVVLI 394
           +  +  +FW  +    ++ +  + +      ++            W     +  R+V   
Sbjct: 20  IRILAVLFWIAIWQFASMYLKQEILLASPVSVIRKLFELIFSGNFWQSVGFSFVRIVTGF 79

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A ++ I + +W  +   +     P   ++ + P   F  L +  +   +L+  +++S 
Sbjct: 80  LLAVLLGIFLAVWAYWSKTVEILTAPVIAVVKSTPVASFIILCLIWIPSKNLS--VFISF 137

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           LM+      I  N++ G         E+A  F +   R  RYI +  + PY+++    + 
Sbjct: 138 LMVLPV---IYTNILEGIRQTDRKILEMAKVFRVNLRRQIRYIYVSQVLPYFLSACRLSL 194

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           G  W A + +EV       + +  +G  +  +    + P++    +++        +
Sbjct: 195 GMCWKAGVAAEVIG-----VPSGSIGEKLYNAKIYLNTPDLFAWTIVIIVISFVFEK 246



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 102/234 (43%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L ++ +    ++ L        P  ++  +   +   +  Q    + +R+++  ++++L
Sbjct: 25  VLFWIAIWQFASMYLKQEILLASPVSVIRKLFELIFSGNFWQSVGFSFVRIVTGFLLAVL 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A  A  S+ + ++  P++ +++S P+  F+   +++         I ++  ++F 
Sbjct: 85  LGIFLAVWAYWSKTVEILTAPVIAVVKSTPVASFIILCLIW---------IPSKNLSVFI 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  ++ + +    R + E+++ FR++  ++  Y+ V   +P  +    +S+ 
Sbjct: 136 SFLMVLPVIYTNILEGIRQTDRKILEMAKVFRVNLRRQIRYIYVSQVLPYFLSACRLSLG 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             W   VA+E+I V         IG  +  A    +   +    + ++ + F++
Sbjct: 196 MCWKAGVAAEVIGVPSGS-----IGEKLYNAKIYLNTPDLFAWTIVIIVISFVF 244


>gi|154508793|ref|ZP_02044435.1| hypothetical protein ACTODO_01302 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798427|gb|EDN80847.1| hypothetical protein ACTODO_01302 [Actinomyces odontolyticus ATCC
           17982]
          Length = 257

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T    V   ++ S++ +P    I     +++ ++PF     A PA    P++V  V Y 
Sbjct: 66  VTGAEAVAGCLLGSVVALPSAYVIYRSRILAAAVEPFLGATQALPAIAIAPILVLWVGYG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++  +  +L++ F     IL + + G      +  E A+    TGW    Y+ LP   P
Sbjct: 126 FMSIVVLCALMVFF----PILVSTVVGLRHIDRELLEAAALDGATGWTMALYMELPLAAP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G       +   ++V E+   G      +GLG  + +         + + ++I+C 
Sbjct: 182 AILGGLRNGFALSVTGAVVGEMVMGG------SGLGQVLTQMRNNVDTAGMFVIIIILCT 235

Query: 565 FVLALNRFLWH 575
               L   ++ 
Sbjct: 236 MATLLYTIVYR 246



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 84/245 (34%), Gaps = 14/245 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P IF  +          +          P  ++    + L + S       T    ++  
Sbjct: 16  PIIFLAVLLAGWWLSTTLTGIEAWRLPNPMSVISKGSVILALPSTWHKVQVTGAEAVAGC 75

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++  +     A +  +SR L   + P L   Q++P +      V++    +        +
Sbjct: 76  LLGSVVALPSAYVIYRSRILAAAVEPFLGATQALPAIAIAPILVLWVGYGF--------M 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  S    L +I R+L E +     +GW    Y+ +P + P ++  +
Sbjct: 128 SIVVLCALMVFFPILVSTVVGLRHIDRELLEAAALDGATGWTMALYMELPLAAPAILGGL 187

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
               +      V  EM++ G       G+G  +       D   +   ++ +  +  L  
Sbjct: 188 RNGFALSVTGAVVGEMVMGGS------GLGQVLTQMRNNVDTAGMFVIIIILCTMATLLY 241

Query: 257 QLLFR 261
            +++R
Sbjct: 242 TIVYR 246


>gi|315426845|dbj|BAJ48466.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
 gi|315428054|dbj|BAJ49642.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 259

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 76/217 (35%), Gaps = 13/217 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                +   +I     T+   ++   ++ +  + +G+ +G+   I   + P        P
Sbjct: 53  EVMLANFPIIIRHSYATLEATLIGFGLSIVFGLLLGLAVGYSSIIYRAVYPLLVAFNTIP 112

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V           +   L     + + I+ NV    +    + ++V  S   +
Sbjct: 113 KVAIVPILVIWFGIG----KVPAVLTAFLISFFPIVVNVAVALATIEPEIRDVLRSLGAS 168

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + +  I +P   PY+      A   A+  +++SE  +         G G  +  ++ +
Sbjct: 169 KTQLFVKIGVPRSMPYFFGSLKVASTLAFVGAVISESVA------SNEGTGYLMIAASSR 222

Query: 550 GSFPEVVLGVLIMCCFVL---ALNRFLWHPLYLYGTR 583
              P V  G+L++    +    +   L   L  +  R
Sbjct: 223 FDVPLVFAGLLVISFIGISLFLVFALLEKRLVGWAYR 259



 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 99/251 (39%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              F L+   +  +   I E  +P     +  +  +   + +++  T    L    +S++
Sbjct: 24  FAGFFLLWEAVTRI-FAIPEFILPSPSRTVEVMLANFPIIIRHSYATLEATLIGFGLSIV 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  +       S  +   + P+L    +IP +  +   V++F           ++ A+  
Sbjct: 83  FGLLLGLAVGYSSIIYRAVYPLLVAFNTIPKVAIVPILVIWFGIG--------KVPAVLT 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  ++  +L  I  ++ +V RS   S  Q F  +GVP SMP    ++ ++ +
Sbjct: 135 AFLISFFPIVVNVAVALATIEPEIRDVLRSLGASKTQLFVKIGVPRSMPYFFGSLKVAST 194

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI---FLYDQL 258
             +   V SE +   +      G G  +  A    D+  +   +L +  +    FL   L
Sbjct: 195 LAFVGAVISESVASNE------GTGYLMIAASSRFDVPLVFAGLLVISFIGISLFLVFAL 248

Query: 259 LFRPMIVWSNK 269
           L + ++ W+ +
Sbjct: 249 LEKRLVGWAYR 259


>gi|260575642|ref|ZP_05843639.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259022040|gb|EEW25339.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 259

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 95/245 (38%), Gaps = 14/245 (5%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V     IL         P  + +     +   +LP +   T  R++ A  +++       
Sbjct: 28  VWVGAAILTADASVLPAPWALAEPFGREMASGALPFHLGMTLWRVVWAFALAMSIGMALG 87

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
               +   L   L P L +  ++P L  +    ++            E AAI A+  +++
Sbjct: 88  LAMGRYPGLDRWLDPWLVVFLNLPALVLIVLCYLWIGLN--------ETAAITAVVLNKI 139

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
            N+T  + +    +  DL  ++R +R+    +  ++ +P   P +       ++  W  V
Sbjct: 140 PNVTTLLREGARALSPDLAAMARVYRMGRLARLRHVVLPQLAPFITGAARSGIAVIWKIV 199

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           +  E +   +      GIG  I L  +  ++  +L   L+ + V+ + + LL +P     
Sbjct: 200 LVVEFLGRSN------GIGFQIHLYFQLYNVGMVLVYALSFIVVMLVVEWLLLQPAEARV 253

Query: 268 NKFRL 272
            ++RL
Sbjct: 254 RRWRL 258



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 13/258 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +L   +   P   ++  S   +  +             +   W              + +
Sbjct: 4   SLPPNKAQTPAAVVRALSLGLLLLVWVGAAILTADASVLPAPWALAEPFGREMASGALPF 63

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            + +   T++RVV    +A  I + +G+ +G  P +   + P+  +    PA V   L  
Sbjct: 64  HLGM---TLWRVVWAFALAMSIGMALGLAMGRYPGLDRWLDPWLVVFLNLPALVLIVLCY 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +              ++      +   +  GA A   D   +A  + +      R+++
Sbjct: 121 LWIGL----NETAAITAVVLNKIPNVTTLLREGARALSPDLAAMARVYRMGRLARLRHVV 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + P+    A +     W   +V E         R+ G+G  I    +  +   V++ 
Sbjct: 177 LPQLAPFITGAARSGIAVIWKIVLVVEFLG------RSNGIGFQIHLYFQLYNVGMVLVY 230

Query: 559 VLIMCCFVLALNRFLWHP 576
            L     +L +   L  P
Sbjct: 231 ALSFIVVMLVVEWLLLQP 248


>gi|149375827|ref|ZP_01893595.1| aliphatic sulfonates transport permease protein, putative
           [Marinobacter algicola DG893]
 gi|149359952|gb|EDM48408.1| aliphatic sulfonates transport permease protein, putative
           [Marinobacter algicola DG893]
          Length = 244

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 111/250 (44%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L  FVL    I  L+        P D++D +       +L  +   T  R++ A  +++L
Sbjct: 3   LPLFVLFWAAIAWLIKSPL-LPTPLDVLDTLMQESASGALWHHLGVTLGRVVVAFALAML 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +  +S+    +  P+L ++ ++P L  +    V+F  +         +AA+ A
Sbjct: 62  LGTGIGIVMGRSQTTNALFDPLLVLLLNLPALVTIILMYVWFGLVE--------VAAVMA 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  ++V N+  ++ +   ++   LEE++  +  + WQ+F  + VP   P L+      ++
Sbjct: 114 VVINKVPNVAVTVREGARSLDHRLEEMATVYEFTQWQRFREVWVPQLFPYLMAATRGGLA 173

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  V+  E++          G+G  + +A +  D+  IL   L  + V+ L +  + +
Sbjct: 174 LIWKIVLVVELLG------RSSGVGFQLHMAFQVFDVATILAYSLAFIAVVQLIELAILQ 227

Query: 262 PMIVWSNKFR 271
           P+   S+++R
Sbjct: 228 PLERRSSRWR 237



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 10/244 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +  +FW  +   +   +    +  +           +     +T+ RVVV   +A +
Sbjct: 2   VLPLFVLFWAAIAWLIKSPLLPTPLDVLDTLMQESASGALWHHLGVTLGRVVVAFALAML 61

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +GI +G     ++   P   LL   PA V   L+        +   + + +     
Sbjct: 62  LGTGIGIVMGRSQTTNALFDPLLVLLLNLPALVTIILMYVWFGLVEVAAVMAVVI----N 117

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +   V  GA +  +  +E+A+ +  T W+ +R + +P +FPY +          W 
Sbjct: 118 KVPNVAVTVREGARSLDHRLEEMATVYEFTQWQRFREVWVPQLFPYLMAATRGGLALIWK 177

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             +V E+        R++G+G  +  + +      ++   L     V  +   +  PL  
Sbjct: 178 IVLVVELLG------RSSGVGFQLHMAFQVFDVATILAYSLAFIAVVQLIELAILQPLER 231

Query: 580 YGTR 583
             +R
Sbjct: 232 RSSR 235


>gi|315655372|ref|ZP_07908272.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315490312|gb|EFU79937.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 267

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 12/260 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG--VAIGIAWQSIGYIVNHFTYQD 375
           R     R       L + +   ++ ++   WF       +   I  +    + +      
Sbjct: 7   RATPPFRAVSGFRPLNVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLS 66

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     T+       ++  I+ +P+   I     +++ +QPF     A PA    P
Sbjct: 67  GKTFWVCLGNTLLAAAGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAP 126

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +      P L +++L      + IL +   G         E A       W   R
Sbjct: 127 LLLIWLP----TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLR 182

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ +P + P  + G       +   ++V E+   G       G+G  I   +     P +
Sbjct: 183 YMEIPLVLPSLLGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGM 236

Query: 556 VLGVLIMCCFVLALNRFLWH 575
            + ++++C     +   ++ 
Sbjct: 237 FVSLIMICTVAALIYLGVYR 256



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 19/249 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           N+   L+  L+I  +  L              P D+V      L   +       T L  
Sbjct: 22  NVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLSGKTFWVCLGNTLLAA 81

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               V+ L+ +   +      R L   + P L   Q++P +      +++          
Sbjct: 82  AGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLLIWL--------P 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA          + +  S    L ++   + E ++      W    Y+ +P  +P L
Sbjct: 134 TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSL 193

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +   ++      V  EM++ G       G+G+ I L     D   +  +++ +  V 
Sbjct: 194 LGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGMFVSLIMICTVA 247

Query: 253 FLYDQLLFR 261
            L    ++R
Sbjct: 248 ALIYLGVYR 256


>gi|260221610|emb|CBA30347.1| hypothetical protein Csp_C23090 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 599

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +   PA  F PLV+  V             ++  GT + ++  V       P    E A
Sbjct: 446 FIRYMPAVAFIPLVMLWVGI----DEGAKVAIIFIGTFFQMVLMVAEDVRRVPMAQIEAA 501

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   T       +ILP   P  +       G AW   +V+E+ +        +GLG  I
Sbjct: 502 QTMGATRREVVEKVILPSAKPALLDTLRVTMGWAWTYLVVAELVA------ANSGLGFAI 555

Query: 544 AESTEKGSFPEVV 556
            ++       ++ 
Sbjct: 556 LKAQRFLQTDKIF 568



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 61/154 (39%), Gaps = 14/154 (9%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++ +P + F+   +++            E A +  IF    + M   + + +  +P   
Sbjct: 446 FIRYMPAVAFIPLVMLWVGID--------EGAKVAIIFIGTFFQMVLMVAEDVRRVPMAQ 497

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +++   +  +    + +P + P L+  + ++M   W ++V +E++          G+
Sbjct: 498 IEAAQTMGATRREVVEKVILPSAKPALLDTLRVTMGWAWTYLVVAELVAANS------GL 551

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G  I  A +      I   +L +  +    DQL 
Sbjct: 552 GFAILKAQRFLQTDKIFAGILLIGLIGLAIDQLF 585


>gi|260459618|ref|ZP_05807872.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034420|gb|EEW35677.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 281

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R    E   +      +  +    W  +     I         +V    Y D   + 
Sbjct: 15  RRVRQERFERIGRWVLPLAIMILAIWLWDRICVWNGIPQYILPRPGVVLWTLYNDAGLLF 74

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+    + + +A I  + + +       +     PFA +L   P    FPL    
Sbjct: 75  SSLLVTLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPL---- 130

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++ Y  N    L L       + IL N   G ++   + +++      T W+  RY+ LP
Sbjct: 131 INIYVDNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDLFKLNGATRWQQLRYLRLP 190

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY++ G   A G +   ++V+E  +      +++GL + I E+  + + P +   + 
Sbjct: 191 AAMPYFLGGLKIAGGLSLIGAVVAEFVAG--TTGQSSGLASRIIEAGYRLNAPRLFAALF 248

Query: 561 IMCCFVLAL 569
           ++    + +
Sbjct: 249 LISLTGILI 257



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 91/244 (37%), Gaps = 17/244 (6%)

Query: 19  IFDLLAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
                   L I I+ I L        GI +  +PR  V +  +  D   L      T   
Sbjct: 24  RIGRWVLPLAIMILAIWLWDRICVWNGIPQYILPRPGVVLWTLYNDAGLLFSSLLVTLRI 83

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
              ++ ++++     + L A+S+ + M   P   ++Q  PI+       +Y  N     +
Sbjct: 84  TFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPLINIYVDNQTTKLL 143

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           + A + A F I +        +    L ++ R+L ++ +    + WQ+  YL +P +MP 
Sbjct: 144 LCAWIVAFFPILS--------NTTLGLNSVDRNLRDLFKLNGATRWQQLRYLRLPAAMPY 195

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  + ++        V +E   V  T     G+ S I  A    +   +  A+  +   
Sbjct: 196 FLGGLKIAGGLSLIGAVVAEF--VAGTTGQSSGLASRIIEAGYRLNAPRLFAALFLISLT 253

Query: 252 IFLY 255
             L 
Sbjct: 254 GILI 257


>gi|327441788|dbj|BAK18153.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 264

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 84/213 (39%), Gaps = 14/213 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + PR +  +    +   SL  + + T    +   ++  LF  + A     S+    V+ P
Sbjct: 51  SSPRAVGSLFITKITDGSLFPHIAITMFETVVGFILGTLFGTLLAISLWSSKTFANVMDP 110

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F            LA +       V   T  ++ +   + 
Sbjct: 111 YLVVLNAMPKVAIGPMILVVFGPNM--------LAVLVMGVLISVIISTIVIFSAFQQVN 162

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V + FR S ++ F ++ +P S P ++  + +++   W  V+  E +V        
Sbjct: 163 ENYIKVMQLFRASKYETFRHVILPASTPTIISTLKVNVGLSWVGVIVGEFLVSSS----- 217

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            G+G  I    +  +   +  A+L ++ +  + 
Sbjct: 218 -GLGYLIISGFQVFNFTLVFLALLIIIVLATIM 249



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 77/194 (39%), Gaps = 12/194 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     ITMF  VV  I+ ++    + I +      ++ + P+  +L A P     P+
Sbjct: 67  GSLFPHIAITMFETVVGFILGTLFGTLLAISLWSSKTFANVMDPYLVVLNAMPKVAIGPM 126

Query: 437 VVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++         PN+   L+M +  +       + +       ++ +V   F  + +  +R
Sbjct: 127 ILVVFG-----PNMLAVLVMGVLISVIISTIVIFSAFQQVNENYIKVMQLFRASKYETFR 181

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ILP   P  ++      G +W   IV E        + ++GLG  I    +  +F  V
Sbjct: 182 HVILPASTPTIISTLKVNVGLSWVGVIVGEFL------VSSSGLGYLIISGFQVFNFTLV 235

Query: 556 VLGVLIMCCFVLAL 569
            L +LI+      +
Sbjct: 236 FLALLIIIVLATIM 249


>gi|330810501|ref|YP_004354963.1| glycine betaine ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327378609|gb|AEA69959.1| Glycine betaine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 282

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   + +T   +  A++IS+   F    +AA+ +R+   L+PIL+IMQ++P   +L  
Sbjct: 84  AGLWVASLQTVALVCVAVLISVTIAFPLGVVAARVKRVDDALMPILNIMQTVPPWVYLIP 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+ F            + AI A     +  M      +   +P+DL E+ ++   S   
Sbjct: 144 AVMLFSLG--------RVPAIIATIVYGIPPMLRLTTLAFKQLPKDLLELGQASGASPKD 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P + P L+  +   +      VV + ++  G            +   +   ++
Sbjct: 196 ILFKIELPTAAPTLLVGLNQCILMSLAMVVLAGLVGAGGLGAE-------VTRGLSRMEM 248

Query: 239 LAILYAMLTMLGVIFLYDQL 258
              L A L ++ +  L D+L
Sbjct: 249 GLGLRAGLGIVAIALLLDRL 268



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 61/217 (28%), Gaps = 4/217 (1%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
               I +S   + +P  + +      L        E  L       ++    +F   V  
Sbjct: 1   MTTQIQFSPGEYLAPAVDWLNANLHGLFSGISLVIEAVLGAVEGVLLAPHPYVFIGIVFA 60

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
                   +   +      +     +      T+  V V ++I+  I  P+G+       
Sbjct: 61  AAFFFANKRVAVFAALMLAFCLFAGLWVASLQTVALVCVAVLISVTIAFPLGVVAARVKR 120

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   ++   P  V+    V   S   +   +   +  I      +L        
Sbjct: 121 VDDALMPILNIMQTVPPWVYLIPAVMLFSLGRVPAIIATIVYGI----PPMLRLTTLAFK 176

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             P D  E+  +   +       I LP   P  + G 
Sbjct: 177 QLPKDLLELGQASGASPKDILFKIELPTAAPTLLVGL 213


>gi|292492596|ref|YP_003528035.1| glycine/betaine ABC transporter substrate-binding protein
           [Nitrosococcus halophilus Nc4]
 gi|291581191|gb|ADE15648.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Nitrosococcus halophilus Nc4]
          Length = 501

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 15/222 (6%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
                                    ++       +  +++ +++       +AA   RLG
Sbjct: 276 AGHFLEQTLGYPPQTASVTAWQRFYRHTKEHLALVGISLLSAIIVAIPLGVIAAYRPRLG 335

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +++ I  I+Q+IP L  L F +       P         A+ A+F   +  +  + Y  
Sbjct: 336 QMILSIAGIIQTIPALALLVFMIPLLGIGGPP--------AMVALFLYSLLPILRNTYTG 387

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L +IP  L E   +  LS   +   + +P +   ++  +  S       V+      +G 
Sbjct: 388 LRDIPPQLLESGAALGLSAAARLRLVELPMASRAILAGIKTS------AVINVGTATLG- 440

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +I   G G  I   I+  D+  IL   +   G+  L   L 
Sbjct: 441 ALIGAGGYGQPILSGIRLDDVGLILEGAIPAAGLALLVQGLF 482



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 5/205 (2%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++GY     +              +  V + ++ A I+ IP+G+   +RP +   I   
Sbjct: 282 QTLGYPPQTASVTAWQRFYRHTKEHLALVGISLLSAIIVAIPLGVIAAYRPRLGQMILSI 341

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A ++   PA      ++  +        + L       +   IL N   G    P    E
Sbjct: 342 AGIIQTIPALALLVFMIPLLGIGGPPAMVAL----FLYSLLPILRNTYTGLRDIPPQLLE 397

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTGLG 540
             ++  ++     R + LP      + G  T+       + +  +   G       +G+ 
Sbjct: 398 SGAALGLSAAARLRLVELPMASRAILAGIKTSAVINVGTATLGALIGAGGYGQPILSGIR 457

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCF 565
                   +G+ P   L +L+   F
Sbjct: 458 LDDVGLILEGAIPAAGLALLVQGLF 482


>gi|291296263|ref|YP_003507661.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290471222|gb|ADD28641.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 307

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 12/213 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
             +++P  A+ T    +  ++++ +  F +A     SR     L+P +   Q++PI+   
Sbjct: 79  SPNAIPVNAAVTAFETVVGLLLAAVVGFFFAIGMVASRAFERALLPWIVASQTVPIIAIA 138

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV          +   + A +  F    + +T  + + L +      ++ +++  S 
Sbjct: 139 PMLVVLLGQYGVQGWLPKAIIAAYIAF----FPITIGVAKGLKSPDPMALDLMKTYNASH 194

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ +  L  P S+P L     ++M+      + +E+     + I   GIG  +A   +  
Sbjct: 195 WQTYLKLRFPASVPYLFTAFKVAMTAALIGAIVAEI-----STISFQGIGKMLAENSRAS 249

Query: 237 DLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           D++A+   ML+   +  L   L   L R +  W
Sbjct: 250 DVVAMWVIMLSSAVLGILLVALVNWLERLLTPW 282



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 80/214 (37%), Gaps = 7/214 (3%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W   G ++      + + V     +T F  VV +++A+++     I +         + 
Sbjct: 66  LWNGFGNLMFPLNSPNAIPV--NAAVTAFETVVGLLLAAVVGFFFAIGMVASRAFERALL 123

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+       P     P++V  +  Y +   L  +++  +   + I   V  G  +     
Sbjct: 124 PWIVASQTVPIIAIAPMLVVLLGQYGVQGWLPKAIIAAYIAFFPITIGVAKGLKSPDPMA 183

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            ++  +++ + W+ +  +  P   PY  T    A   A   +IV+E+       +   G+
Sbjct: 184 LDLMKTYNASHWQTYLKLRFPASVPYLFTAFKVAMTAALIGAIVAEI-----STISFQGI 238

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  +AE++       + + +L      + L   +
Sbjct: 239 GKMLAENSRASDVVAMWVIMLSSAVLGILLVALV 272


>gi|222109730|ref|YP_002551994.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
 gi|221729174|gb|ACM31994.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
          Length = 300

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 80/215 (37%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                     +    L    + +   +L   +  +   FV  TLA  ++    +L  +  
Sbjct: 81  LQTAQAFAQGVASGELLHKTALSLAVLLKGYLAGIACAFVLTTLAVSTQLGRDLLSTLTA 140

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F             + +F +  S +W +  + Y     +P  L
Sbjct: 141 MFNPLPAIALLPLALLWFGLGQG--------SLVFVLVHSVLWPLALNTYAGFQGVPETL 192

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    L VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 193 RMAGRNYGLKGLRYVLQLLVPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GQGGL 250

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +    + L F
Sbjct: 251 GWYIFQNRNELYTDKVFAGLAMVIAIGLAVENLGF 285



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG    P   +    ++ + G R+   +++P   P  ++G  
Sbjct: 165 LVFVLVHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPSILSGLK 224

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    LA+  
Sbjct: 225 IGWAFAWRTLIAAELVFGASS--GQGGLGWYIFQNRNELYTDKVFAGLAMVIAIGLAVEN 282

Query: 572 FLWHPLYLYGTRC 584
             +H L     R 
Sbjct: 283 LGFHTLERLTVRR 295


>gi|119488909|ref|ZP_01621871.1| Binding-protein-dependent transport systems inner membrane
           component [Lyngbya sp. PCC 8106]
 gi|119455070|gb|EAW36212.1| Binding-protein-dependent transport systems inner membrane
           component [Lyngbya sp. PCC 8106]
          Length = 270

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++      D   +     +T+   VV  I A+++ + + + +     I   + P+A +L 
Sbjct: 52  LILKTLIADWYLLAPALIVTLKITVVAFITAAVLGLLIAMLMAQSKWIEKSLYPYAVILQ 111

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++  +        +  + ++     + I+ N   G ++  ++ +++   +
Sbjct: 112 TVPLAAIAPLIIIWLRNNTFAALVLCAWIV---AFFPIISNTTFGLNSVDSNLRDLFRLY 168

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+   Y+ LP   PYY++    + G +   ++V+E  +        +GL   +  +
Sbjct: 169 KASRWQTMLYLRLPSALPYYLSALRISGGLSLIGAVVAEFVAG--TGGTNSGLAYQMLIA 226

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           +     P +   ++I+    + +
Sbjct: 227 SYNLEIPRMFAALVIISVLGIVI 249



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 95/250 (38%), Gaps = 10/250 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
            L   +S      +   +  +L     ++ +  I    +P   + +  +  D + L    
Sbjct: 10  RLNYLVSLDFLAPVAVGIVVLLTWE-SSVKIANIPPYLLPSPSLILKTLIADWYLLAPAL 68

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T    + A + + +   + A L A+S+ +   L P   I+Q++P+       +++  N
Sbjct: 69  IVTLKITVVAFITAAVLGLLIAMLMAQSKWIEKSLYPYAVILQTVPLAAIAPLIIIWLRN 128

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                      A +   +    + +  +    L ++  +L ++ R ++ S WQ   YL +
Sbjct: 129 N-------TFAALVLCAWIVAFFPIISNTTFGLNSVDSNLRDLFRLYKASRWQTMLYLRL 181

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P  +  + +S        V +E   V  T     G+   + +A    ++  +  A+
Sbjct: 182 PSALPYYLSALRISGGLSLIGAVVAEF--VAGTGGTNSGLAYQMLIASYNLEIPRMFAAL 239

Query: 246 LTMLGVIFLY 255
           + +  +  + 
Sbjct: 240 VIISVLGIVI 249


>gi|304404188|ref|ZP_07385850.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
 gi|304347166|gb|EFM12998.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus curdlanolyticus YK9]
          Length = 255

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 93/260 (35%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+I P    L   V+V  ++ +    ++   +P     +         L  + S T    
Sbjct: 6   RKIVPPAIVLALIVIVWQLV-VDGGAVERWELPSPTDIVHEAASIAPRLLDHTSATLQLA 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   +I      V A            + P+L + Q+IPI+      V++F      K++
Sbjct: 65  LIGFMIGAAAGIVLAAFLHLIPGAREAISPLLILSQNIPIIVLAPLLVLWFGFGLTPKIV 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +  S +          L      L E  R      W+ F  L +P+S+P +
Sbjct: 125 LVTLVCFFPVAVSMLT--------GLRERDARLAEYLRMLGAGRWRLFASLELPYSIPYV 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      V +E +          G+G ++ L+ K      +  A++ ++ + 
Sbjct: 177 FSGLKIAATYSMTSAVVAEWVG------ADRGLGYFMQLSRKGFMAPRVFAAVIIIVAIS 230

Query: 253 FLY---DQLLFRPMIVWSNK 269
                   L+ R MI W  K
Sbjct: 231 LALYSVIVLIERLMIRWRPK 250



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 10/241 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            N+ ++     V  ++ I W  VV G A+          + H        ++     T+ 
Sbjct: 3   SNWRKIVPPAIVLALIVIVWQLVVDGGAVERWELPSPTDIVHEAASIAPRLLDHTSATLQ 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++  +I +   I +  ++   P     I P   L    P  V  PL+V    +     
Sbjct: 63  LALIGFMIGAAAGIVLAAFLHLIPGAREAISPLLILSQNIPIIVLAPLLVLWFGFGLTPK 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                +L+     + +  +++ G         E         WR +  + LP   PY  +
Sbjct: 123 ----IVLVTLVCFFPVAVSMLTGLRERDARLAEYLRMLGAGRWRLFASLELPYSIPYVFS 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   +  +++V+E            GLG ++  S +    P V   V+I+    LA
Sbjct: 179 GLKIAATYSMTSAVVAEWVG------ADRGLGYFMQLSRKGFMAPRVFAAVIIIVAISLA 232

Query: 569 L 569
           L
Sbjct: 233 L 233


>gi|163735588|ref|ZP_02143020.1| aliphatic sulfonates transport permease protein, putative
           [Roseobacter litoralis Och 149]
 gi|161391208|gb|EDQ15545.1| aliphatic sulfonates transport permease protein, putative
           [Roseobacter litoralis Och 149]
          Length = 232

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 97/243 (39%), Gaps = 14/243 (5%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             +  +L    Q    P  ++  +   L    L  +   T +R++ A  +++    +   
Sbjct: 2   WVVAAMLTQDAQILPTPWQLLPPLRQELASGELWTHLGATIVRVIWAFALAMSLGTILGL 61

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +  +S  +   L P L +  ++P L  +    ++            E AAI A+  ++V 
Sbjct: 62  IMGRSVAVNRWLDPWLVVFLNLPALVLIVLCYLWIGL--------TEAAAITAVTLNKVP 113

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           N+   + +    +  DL+ +S+ +R+S W +  ++  P   P +       ++  W  V+
Sbjct: 114 NVAVVIREGARALDPDLDALSKVYRMSWWTRMRHVVFPQLAPFVAAASRSGLAVIWKIVL 173

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
             E +          G+G  I L  +  D+  +L    + + V+ L + ++ +P      
Sbjct: 174 VVEFLG------RSSGVGFQIHLYFQLFDVAMVLVYAFSFITVMLLVEWIILQPFERHVA 227

Query: 269 KFR 271
           ++R
Sbjct: 228 RWR 230



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 76/223 (34%), Gaps = 13/223 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           WQ +  +       ++   +     T+ RV+    +A  +   +G+ +G    ++  + P
Sbjct: 19  WQLLPPLRQELASGELWTHLG---ATIVRVIWAFALAMSLGTILGLIMGRSVAVNRWLDP 75

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +  +    PA V   L    +              +       +   +  GA A   D  
Sbjct: 76  WLVVFLNLPALVLIVLCYLWIGLTEA----AAITAVTLNKVPNVAVVIREGARALDPDLD 131

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            ++  + ++ W   R+++ P + P+    + +     W   +V E         R++G+G
Sbjct: 132 ALSKVYRMSWWTRMRHVVFPQLAPFVAAASRSGLAVIWKIVLVVEFLG------RSSGVG 185

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             I    +      V++        +L +   +  P   +  R
Sbjct: 186 FQIHLYFQLFDVAMVLVYAFSFITVMLLVEWIILQPFERHVAR 228


>gi|293603299|ref|ZP_06685727.1| nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding
           cassette transporter, membrane protein [Achromobacter
           piechaudii ATCC 43553]
 gi|292818209|gb|EFF77262.1| nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding
           cassette transporter, membrane protein [Achromobacter
           piechaudii ATCC 43553]
          Length = 278

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 22  LLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+    I+  + +     T+ P  +        +   L  +   T    L    +S+
Sbjct: 43  LIVFLCAWEILPRMHILNPLLTSYPSALWPTFIELWNNGHLATHIMTTLSATLVGFTLSM 102

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               V A     S  L  VL P L +  ++P + F+    ++  + Y    +   +A   
Sbjct: 103 AIGIVVAAALWWSDFLYKVLDPFLVVANAMPKIAFVPIFYLWLGSDYAVYGMAVAIAVFV 162

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I           +Y     I ++  +++ +F  S WQ    + +P S+P L+  + M++
Sbjct: 163 TIMV---------VYAGFRGIDQNKVKLAHTFGASRWQVLTKVVLPGSVPTLIAAVKMNI 213

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                 V+      VG+      G+G  I    +   L  ++ A+  +  +  +   +++
Sbjct: 214 GLALVGVI------VGEFQSADSGLGFLIMNGSQVFKLNIVMTAIAMLALISSVMYLIIY 267

Query: 261 RPMIVWSNKF 270
           R     + ++
Sbjct: 268 RVEAAVARRY 277



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 11/211 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +  ++      T+   +V   ++  I I V   + +   +   + PF  +  A P   
Sbjct: 77  LWNNGHLATHIMTTLSATLVGFTLSMAIGIVVAAALWWSDFLYKVLDPFLVVANAMPKIA 136

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F P+    +   +    + +++ +        +  V AG      +  ++A +F  + W+
Sbjct: 137 FVPIFYLWLGSDYAVYGMAVAIAVFV-----TIMVVYAGFRGIDQNKVKLAHTFGASRWQ 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LPG  P  +       G A    IV E  S        +GLG  I   ++    
Sbjct: 192 VLTKVVLPGSVPTLIAAVKMNIGLALVGVIVGEFQS------ADSGLGFLIMNGSQVFKL 245

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V+  + ++      +   ++        R
Sbjct: 246 NIVMTAIAMLALISSVMYLIIYRVEAAVARR 276


>gi|158424340|ref|YP_001525632.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331229|dbj|BAF88714.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 279

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 86/265 (32%), Gaps = 15/265 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           TL       P   L           + I     +   A  + WQ+   +   FT     +
Sbjct: 8   TLRPRPLPRPSLSLPRLWRHTGVRRIVILALLALIWQAAAL-WQNNPLLFPTFTDTVKAF 66

Query: 379 V--------IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +        +W    ++  ++    IA  + + +       P +   +Q    +    PA
Sbjct: 67  IEATTSEGMLWSALASLTVLLKGYAIAIALALALVSGAVAIPFLRDVLQTLTSMFNPLPA 126

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL +  +        L L   +     W      ++G    P   + V  ++ + G
Sbjct: 127 IALLPLAMMWLGLGEPALLLVLVHAV----LWPFALATLSGFEQVPETQRLVGRNYGLRG 182

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
             +  +I+LP   P  ++G   +   AW   I +E+     +     GLG +I  +  + 
Sbjct: 183 PAYVVHILLPAALPSILSGLKISWAFAWRTLIAAELVFG--VSSSQGGLGWFIYRNRNEL 240

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWH 575
               V  G+  +    L +   ++ 
Sbjct: 241 LTDRVFAGLATVILIGLVVEMVVFR 265



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 84/240 (35%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L+     +  +         D V           +   A  +   +L    I++ 
Sbjct: 36  LALLALIWQAAALWQNNPLLFPTFTDTVKAFIEATTSEGMLWSALASLTVLLKGYAIAIA 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                 + A     L  VL  +  +   +P +  L   +++     P  ++    A    
Sbjct: 96  LALALVSGAVAIPFLRDVLQTLTSMFNPLPAIALLPLAMMWLGLGEPALLLVLVHA---- 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +W    +       +P     V R++ L G     ++ +P ++P ++  + +S +
Sbjct: 152 ----VLWPFALATLSGFEQVPETQRLVGRNYGLRGPAYVVHILLPAALPSILSGLKISWA 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G +I     E     +   + T++ +  + + ++FR
Sbjct: 208 FAWRTLIAAELVFGVSSSQG--GLGWFIYRNRNELLTDRVFAGLATVILIGLVVEMVVFR 265


>gi|78222218|ref|YP_383965.1| binding-protein dependent transport system inner membrane protein
           [Geobacter metallireducens GS-15]
 gi|78193473|gb|ABB31240.1| Binding-protein-dependent transport systems inner membrane
           component [Geobacter metallireducens GS-15]
          Length = 260

 Score = 87.7 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            Y++     T+ R+     +A+ I + +G+ +G  P  +   +     L   P   + P+
Sbjct: 55  GYLLPSVEATLVRMGKGFTLAAAIGLSIGLVMGVSPITNLCFKSLFLGLQTLPTAAWVPI 114

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +  ++I  +   +     +G    P  +   A +     +     
Sbjct: 115 SLLIYGLSERG----IYFVIIMSSVPAMALATSSGILQIPPLYLRAAKTLGTPWYAMPAR 170

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  VTG        W+  + +E+         T GLG  +    E     +V+
Sbjct: 171 VILPAALPAIVTGLKLGWTLGWHGGVSAELIK------STIGLGFLLYMGRELNDAAQVM 224

Query: 557 LGVLIMCCFVLALNRFLW 574
             +++   F L L+RF +
Sbjct: 225 GIMVVTILFGLLLDRFFF 242



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 14/202 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T +RM     ++         +   S    +    +   +Q++P   ++  
Sbjct: 55  GYLLPSVEATLVRMGKGFTLAAAIGLSIGLVMGVSPITNLCFKSLFLGLQTLPTAAWVPI 114

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           +++ +     G          F I  S V  M  +    +  IP      +++     + 
Sbjct: 115 SLLIYGLSERGIY--------FVIIMSSVPAMALATSSGILQIPPLYLRAAKTLGTPWYA 166

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +V  + +  + GW   V++E+I          G+G  + +  +  D 
Sbjct: 167 MPARVILPAALPAIVTGLKLGWTLGWHGGVSAELI------KSTIGLGFLLYMGRELNDA 220

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             ++  M+  +    L D+  F
Sbjct: 221 AQVMGIMVVTILFGLLLDRFFF 242


>gi|326793665|ref|YP_004311485.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326544429|gb|ADZ89649.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 263

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +F  +  + +  ++  + +           +      +++     +   T    L
Sbjct: 17  RFAPALF-FIVLIALWELVCQVGNVPNYILPAPSAIVSAFFDVEISRWLTHLWATLRVAL 75

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +S+L     +    +S  L   L P L ++QS P++      +V      P +V+ 
Sbjct: 76  MGFALSILIAIPLSIGMIRSELLNRTLYPALIVIQSTPVVAVAPLIIVLLGTDDPSRVLI 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L   F         +  S    +   P ++ E+S+S R   +++ W + +P+++P + 
Sbjct: 136 TCLITFF--------PLVVSTTTGMLETPPEMIELSQSLRAPRYRETWQIRIPYAIPHIF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S++      V +E +          G+G +I  +     +      ++ +  +  
Sbjct: 188 SGLRVSITLAIIGAVVAEFVA------AEKGLGYFIQFSTSFFKIPQAFAGLIFLAAISL 241

Query: 254 LY 255
           L 
Sbjct: 242 LL 243



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           IV+ F   ++   +     T+   ++   ++ +I IP+ I +     ++  + P   ++ 
Sbjct: 51  IVSAFFDVEISRWLTHLWATLRVALMGFALSILIAIPLSIGMIRSELLNRTLYPALIVIQ 110

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     PL++  +       +    L+    T + ++ +   G    P +  E++ S 
Sbjct: 111 STPVVAVAPLIIVLLG----TDDPSRVLITCLITFFPLVVSTTTGMLETPPEMIELSQSL 166

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               +R    I +P   P+  +G   +   A   ++V+E  +         GLG +I  S
Sbjct: 167 RAPRYRETWQIRIPYAIPHIFSGLRVSITLAIIGAVVAEFVAAEK------GLGYFIQFS 220

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           T     P+   G++ +    L L
Sbjct: 221 TSFFKIPQAFAGLIFLAAISLLL 243


>gi|187935334|ref|YP_001887112.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum B str. Eklund 17B]
 gi|187723487|gb|ACD24708.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum B str. Eklund 17B]
          Length = 523

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 19/199 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T+L +     ++++         +  +++   ++ I +I+Q+IP +  L F +
Sbjct: 19  LIEHIKLTSLSV----GLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFAI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +               AI  +    +  +  +    + +I     E +R   L+ +Q  
Sbjct: 75  PFLGIG--------TTPAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQIL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+  +   
Sbjct: 127 VKVQLPLALPVIMSGVRIS------AVTAVGLMTMAAF-IGGGGLGYLVFSGIRTVNNYQ 179

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL   +    +    D L 
Sbjct: 180 ILAGAIPACILALAVDFLF 198



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +  L    +    + + +A II +P+GI I +   ++  +   A ++ A P+       
Sbjct: 14  QIFMLLIEHIKLTSLSVGLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFA 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            ++++  +   I+ N   G  +      E A    +T ++    +
Sbjct: 74  IPFLGIGTT----PAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQILVKV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G   +   A     ++     G       GLG  +       +  +++ 
Sbjct: 130 QLPLALPVIMSGVRISAVTAVGLMTMAAFIGGG-------GLGYLVFSGIRTVNNYQILA 182

Query: 558 GVLIMCCFVLALNRFL 573
           G +  C   LA++   
Sbjct: 183 GAIPACILALAVDFLF 198


>gi|167757174|ref|ZP_02429301.1| hypothetical protein CLORAM_02724 [Clostridium ramosum DSM 1402]
 gi|167703349|gb|EDS17928.1| hypothetical protein CLORAM_02724 [Clostridium ramosum DSM 1402]
          Length = 513

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+ +   +   + ++ ++    ++ I++ M +IP +  L F + +          
Sbjct: 28  LIAIIIATVIGLILGVIISEYKKSSKTILGIINFMYTIPSISLLGFLIPFSGIGN----- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + Y  + NI  ++ E +     + WQ  + + +P ++P +
Sbjct: 83  ---STAIIALSVYALLPMVRNTYTGIINIDDNIIEAATGMGSTRWQILYKIKLPLALPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +             V  +  +    + I   G+G  I   I   +    L   L +  + 
Sbjct: 140 MSGFR-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTLTGSLLIAILA 192

Query: 253 FLYDQLL 259
            + D +L
Sbjct: 193 LITDIVL 199



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ IIIA++I + +G+ I      S  I      +   P+      ++      +    +
Sbjct: 28  LIAIIIATVIGLILGVIISEYKKSSKTILGIINFMYTIPSISLLGFLIPFSGIGNSTAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            LS+  +      ++ N   G     ++  E A+    T W+    I LP   P  ++G 
Sbjct: 88  ALSVYALL----PMVRNTYTGIINIDDNIIEAATGMGSTRWQILYKIKLPLALPVIMSGF 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N   ++   +     +   GLG  I       +    + G L++    L  +
Sbjct: 144 R-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTLTGSLLIAILALITD 196

Query: 571 RFL 573
             L
Sbjct: 197 IVL 199


>gi|239813286|ref|YP_002942196.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799863|gb|ACS16930.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 276

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 14/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++R +    IA+++ +P+G+ +G        ++       + P++   PL +     
Sbjct: 83  AMTVWRTLQAFAIAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGV 142

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +N     +    FG    ++FN   G           A     + W+ ++ +++    
Sbjct: 143 SDVNKVAIAA----FGALLIVVFNSAYGVINARKQRVMAARVMGASRWQIFKDVLVWESL 198

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                G  +A   A    IV+E+          TGLG  I ++ +  +   +   +L   
Sbjct: 199 QPSFVGLRSAVSMALVIVIVAEMFIGSD-----TGLGHRIIDAQQVLNVKSMYAAILAAG 253

Query: 564 CFVLALNRFLWHPLYLYGTRCL 585
               ALN      L+L   R +
Sbjct: 254 ALGYALNI-----LFLIAERRI 270



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 96/264 (36%), Gaps = 16/264 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P +  R+ P I  L  F++    + +          P D V  +   L    L    + T
Sbjct: 26  PPLRDRLLPFIGPLALFIVWDLAVRLGFIKPILLPTPADTVAALITGLAGGPLLTDFAMT 85

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L A  I+ +       L   + +    +  ++D  +S P    +   ++ F     
Sbjct: 86  VWRTLQAFAIAAVVGVPLGVLLGSNEKAYRSVEFLIDFFRSTPSSALIPLFLLIFGVSDV 145

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV  A   A+  +         F+    + N  +     +R    S WQ F  + V  S
Sbjct: 146 NKVAIAAFGALLIV--------VFNSAYGVINARKQRVMAARVMGASRWQIFKDVLVWES 197

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +      +  ++S     V+ +EM +  DT     G+G  I  A +  ++ ++  A+L  
Sbjct: 198 LQPSFVGLRSAVSMALVIVIVAEMFIGSDT-----GLGHRIIDAQQVLNVKSMYAAILAA 252

Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269
             + +  + L     R ++ WS +
Sbjct: 253 GALGYALNILFLIAERRIVHWSGR 276


>gi|317495803|ref|ZP_07954166.1| inner membrane binding protein [Gemella moribillum M424]
 gi|316913980|gb|EFV35463.1| inner membrane binding protein [Gemella moribillum M424]
          Length = 504

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 21/179 (11%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                + + ++++    + I  + Q+IP L  L   + +             + A+ A+ 
Sbjct: 37  VPLGIILSNNKKISEWFLQITGVFQTIPSLALLGLFIPFMGIG--------TVPAVVALV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  S    L  I   LEE + +F ++ W+K     +  SMP L+  +       
Sbjct: 89  IYALFPILQSTLTGLSEIDSSLEEAATAFGMTKWEKLKKYQLALSMPILMGGVR------ 142

Query: 204 WFFVVASEMIVVGDTV---IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                AS MI+   T+   I   G+GS+I L I   +   IL   ++   +  ++  L+
Sbjct: 143 ----TASIMIIGTATLAALIGAGGLGSFILLGIDRNNSALILIGAISSAVLAIIFGALI 197



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 68/175 (38%), Gaps = 14/175 (8%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI +     IS        +    P+     L +  +    +   + L +       
Sbjct: 37  VPLGIILSNNKKISEWFLQITGVFQTIPSLALLGLFIPFMGIGTVPAVVALVIY----AL 92

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL + + G S   +  +E A++F +T W   +   L    P  + G  TA       +
Sbjct: 93  FPILQSTLTGLSEIDSSLEEAATAFGMTKWEKLKKYQLALSMPILMGGVRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFVLALNRFL 573
            ++ +   G       GLG++I    ++ +   +++G +   ++     AL +FL
Sbjct: 153 TLAALIGAG-------GLGSFILLGIDRNNSALILIGAISSAVLAIIFGALIKFL 200


>gi|187776908|ref|ZP_02993381.1| hypothetical protein CLOSPO_00447 [Clostridium sporogenes ATCC
           15579]
 gi|187775567|gb|EDU39369.1| hypothetical protein CLOSPO_00447 [Clostridium sporogenes ATCC
           15579]
          Length = 267

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGTFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDIVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGTFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDIVMFSIIILAILAYLM 250


>gi|329930489|ref|ZP_08284029.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328934867|gb|EGG31357.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 258

 Score = 87.7 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 78/223 (34%), Gaps = 13/223 (5%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
            V  + +    Q    + N F   ++   ++   +T+   V    IA+I  + VG+ +  
Sbjct: 35  AVSSLYLPAPSQVFRELFNLFGDGEIWKHLY---VTLAEFVAGYGIAAIGGLAVGMAMVL 91

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P      +P+   L A P     PL+   +     +       ++     + I  N + 
Sbjct: 92  IPWAERFFRPYLSALMAIPKVTIVPLLALWLGIGITHK----ISIVFLFCFFTITVNTMT 147

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G     ++  +VA  F  T ++    +ILP   P        +       ++  E+ +  
Sbjct: 148 GIKQTADNHLKVAKVFEATRYQTIMKVILPSAAPTIFAALRISAATGLVGALFGEMLASK 207

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG  + ++T   +  +    V ++    + +   +
Sbjct: 208 D------GLGNILVKATSLYNTAQAFAIVALVTVVSVLIISLI 244



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 73/238 (30%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   +   ++            P  +   +        + ++   T    ++   I+ +
Sbjct: 21  LVILGICEILVRTEAVSSLYLPAPSQVFRELFNLFGDGEIWKHLYVTLAEFVAGYGIAAI 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                               P L  + +IP +  +    ++       K+    L   F 
Sbjct: 81  GGLAVGMAMVLIPWAERFFRPYLSALMAIPKVTIVPLLALWLGIGITHKISIVFLFCFFT 140

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I        T +    +     +  +V++ F  + +Q    + +P + P +   + +S +
Sbjct: 141 I--------TVNTMTGIKQTADNHLKVAKVFEATRYQTIMKVILPSAAPTIFAALRISAA 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G    +  EM+   D      G+G+ +  A    +       +  +  V  L   L+
Sbjct: 193 TGLVGALFGEMLASKD------GLGNILVKATSLYNTAQAFAIVALVTVVSVLIISLI 244


>gi|260771104|ref|ZP_05880031.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
 gi|260613701|gb|EEX38893.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
          Length = 260

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 13/206 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I       + +  L  +W    T+   +    ++  + IP+ I +     ++  I P   
Sbjct: 45  IALAFTQVSAERWLDNLW---ATLRIALFGFALSFALSIPLAIMMVNSKFLTRAIFPLLV 101

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++ + P     PL++  +             +    T + ++ +   G  A P +  E++
Sbjct: 102 VIQSTPVVAIAPLLIVILGTGDA----PRLAITCLITFFPLVVSATTGMLATPPELIELS 157

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S +++  +    I LP   P+  +G   A   A   S+++E  +         GLG  +
Sbjct: 158 RSLNVSNHKTIWQIRLPYAIPHIFSGVKVAITLAVIGSVIAEFVAAEK------GLGYLV 211

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
             ST     P+    ++ +    + L
Sbjct: 212 QFSTSYFKIPQAFAALVFLSVVSMVL 237



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 14/189 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L    +S   +   A +   S+ L   + P+L ++QS P++      +V     
Sbjct: 63  ATLRIALFGFALSFALSIPLAIMMVNSKFLTRAIFPLLVVIQSTPVVAIAPLLIVILGTG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              ++    L   F         +  S    +   P +L E+SRS  +S  +  W + +P
Sbjct: 123 DAPRLAITCLITFF--------PLVVSATTGMLATPPELIELSRSLNVSNHKTIWQIRLP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +++P +   + ++++      V +E +          G+G  +  +     +     A++
Sbjct: 175 YAIPHIFSGVKVAITLAVIGSVIAEFVA------AEKGLGYLVQFSTSYFKIPQAFAALV 228

Query: 247 TMLGVIFLY 255
            +  V  + 
Sbjct: 229 FLSVVSMVL 237


>gi|256371469|ref|YP_003109293.1| binding-protein-dependent transport systems inner membrane
           component [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008053|gb|ACU53620.1| binding-protein-dependent transport systems inner membrane
           component [Acidimicrobium ferrooxidans DSM 10331]
          Length = 271

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 96/255 (37%), Gaps = 22/255 (8%)

Query: 23  LAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +A  +V+ +   +            T P DIV          +L      TT R+    V
Sbjct: 28  IATPIVLLVAWQIAASTHAIDTRIFTPPSDIVRTAGSLATNGTLGADLGITTARLAVGYV 87

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I  +   V        R L   L P+   + ++P +  L   +V F      K+I     
Sbjct: 88  IGAVLGVVVGLALGVVRPLRSALSPLFAALYAVPQIALLPLLLVIFGLGETAKIITVAAV 147

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +          +   ++  +P +L E  +++  + W++F ++ VP + PG+   + 
Sbjct: 148 TFFVV--------ELNTLGAVRRVPPELLEAGQAYGATRWRRFVHVLVPATAPGIFTGLR 199

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++++     V A+E +          G+G  +  + +  +   +   ++ +  +  +   
Sbjct: 200 VAVALALVVVTATEFVAANS------GLGYLVWNSWQLFEPADMYVGLVVIALLGVVATG 253

Query: 258 L---LFRPMIVWSNK 269
           +   + R ++ W+ +
Sbjct: 254 IVVGVERLVLPWTRR 268



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT  R+ V  +I +++ + VG+ +G    + S + P    L A P     PL++     
Sbjct: 76  GITTARLAVGYVIGAVLGVVVGLALGVVRPLRSALSPLFAALYAVPQIALLPLLLVIFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 + ++ +    T + +  N +      P +  E   ++  T WR + ++++P   
Sbjct: 136 GETAKIITVAAV----TFFVVELNTLGAVRRVPPELLEAGQAYGATRWRRFVHVLVPATA 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   A   A      +E  +        +GLG  +  S +     ++ +G++++ 
Sbjct: 192 PGIFTGLRVAVALALVVVTATEFVA------ANSGLGYLVWNSWQLFEPADMYVGLVVIA 245

Query: 564 CFVLA 568
              + 
Sbjct: 246 LLGVV 250


>gi|290509100|ref|ZP_06548471.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|289778494|gb|EFD86491.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 331

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 90/281 (32%), Gaps = 19/281 (6%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F      +   +       + +     G++       + +    +       +    V+ 
Sbjct: 36  FTLAWPDAGRRWPFSEGWALAQFTLGGGLLLLALSYRYWRARGARVRHAGKWLALLPVLF 95

Query: 354 GVAIGIAWQSIGYIVNHFTYQ---------DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            V  G+  +S    V  F            D   ++     ++  + + +++ +      
Sbjct: 96  AVWEGLTAKSAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFIT 155

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG+   I   + P  +LL   P+    PL +                L+   T + +
Sbjct: 156 GLSIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG----ASVFLIALSTWFPV 211

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                +G       + +VA +   +       + +P   P    G     G +++  IV+
Sbjct: 212 TVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVA 271

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           E+          +G+G Y+  +    ++P +   +L+M   
Sbjct: 272 EMVG------VKSGIGFYLQWAQGWAAYPNMYAALLVMALL 306



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 152 GFITGLSIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 203

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 204 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 263

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV--IFLYDQLLF 260
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +    +    + 
Sbjct: 264 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFML 317

Query: 261 R-PMIVWS 267
           R  ++ W 
Sbjct: 318 RDRLLSWQ 325


>gi|317152298|ref|YP_004120346.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316942549|gb|ADU61600.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 251

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 12/201 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ R +  ++ A    + +G+  G  P     I P    L + P  ++  L++  V  
Sbjct: 53  AITIARGLTGLVAALACALVLGVAAGSSPTAMRMITPLVAALQSCPPILWITLLMVWVGT 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                   +++ ++F + +  LF N+  G  A      ++A  + I   R    ++LPG+
Sbjct: 113 GST-----VAVTVVFASVFPPLFANIAQGCMALDRRLFDMARLYRIPKVRMLARVVLPGL 167

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY + G   A   +W  + V+E          +TG+GA +  +      P +     I+
Sbjct: 168 APYLLAGLSYAAATSWKITAVAEFLG------SSTGIGAKVFWAYRMLEIPRLFAWAGIV 221

Query: 563 CCFVLALNRFLWHPLYLYGTR 583
               +AL   +  PL      
Sbjct: 222 ILLGVALELLVIAPLRKSAET 242



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 87/238 (36%), Gaps = 14/238 (5%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
             L  G      P  +   + I           + T  R L+ +V +L    V    A  
Sbjct: 20  ASLTFGAMLVPTPASVCRELGIMALQLETWTTLAITIARGLTGLVAALACALVLGVAAGS 79

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S     ++ P++  +QS P + ++T  +V+               A+  +F S    +  
Sbjct: 80  SPTAMRMITPLVAALQSCPPILWITLLMVWVGTG--------STVAVTVVFASVFPPLFA 131

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           ++ Q    + R L +++R +R+   +    + +P   P L+  +  + +  W     +E 
Sbjct: 132 NIAQGCMALDRRLFDMARLYRIPKVRMLARVVLPGLAPYLLAGLSYAAATSWKITAVAEF 191

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           +          GIG+ +  A +  ++  +      ++ +    + L+  P+   +  F
Sbjct: 192 LGSST------GIGAKVFWAYRMLEIPRLFAWAGIVILLGVALELLVIAPLRKSAETF 243


>gi|300717291|ref|YP_003742094.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Erwinia
           billingiae Eb661]
 gi|299063127|emb|CAX60247.1| nitrate/sulfonate/bicarbonate ABC transporter, permease component
           [Erwinia billingiae Eb661]
          Length = 271

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 87/247 (35%), Gaps = 6/247 (2%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
             +     F ++     V+ ++ + W   V    I         ++    + +   ++  
Sbjct: 7   TPWASNPTFRKILYPAVVAVVVILLWQGWVSYFKIPQFLVPSPVVMLQSLWTNFGSLMMS 66

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+   ++  +++ +I   V   +     + + + P+   L   P     PL++  V 
Sbjct: 67  LLFTLKITLISFVLSIVIGCAVAFVLVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVK 126

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+  +  +L+      + I+ N   G  +            H +  +    + +P  
Sbjct: 127 DTTLSLVVCSTLM----AVFPIISNTTQGLRSVSPGLLSYFQLSHASRLQILVRLRIPSA 182

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY+      + G +   ++V+E  +        TGL   I ++  +   P +   +L++
Sbjct: 183 LPYFFGALRISSGLSLIGAVVAEFVAG--TGGNNTGLAYQILQAGYQLDIPLMFAALLLI 240

Query: 563 CCFVLAL 569
               +AL
Sbjct: 241 SLTGIAL 247



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 95/260 (36%), Gaps = 15/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+I       +  +L+     +    I +  VP  +V +  +  +  SL      T    
Sbjct: 16  RKILYPAVVAVVVILLWQG-WVSYFKIPQFLVPSPVVMLQSLWTNFGSLMMSLLFTLKIT 74

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L + V+S++     A +  ++R +   L P +  +Q  PI+      +++  +     V+
Sbjct: 75  LISFVLSIVIGCAVAFVLVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDTTLSLVV 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + L A+F I +        +  Q L ++   L    +    S  Q    L +P ++P  
Sbjct: 135 CSTLMAVFPIIS--------NTTQGLRSVSPGLLSYFQLSHASRLQILVRLRIPSALPYF 186

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM----LTM 248
              + +S        V +E +          G+   I  A  + D+  +  A+    LT 
Sbjct: 187 FGALRISSGLSLIGAVVAEFVAGTGGNNT--GLAYQILQAGYQLDIPLMFAALLLISLTG 244

Query: 249 LGVIFLYDQLLFRPMIVWSN 268
           + +  +   +  R +  W  
Sbjct: 245 IALFGVMSWISRRALSAWHE 264


>gi|270262667|ref|ZP_06190938.1| transporter [Serratia odorifera 4Rx13]
 gi|270043351|gb|EFA16444.1| transporter [Serratia odorifera 4Rx13]
          Length = 271

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 85/248 (34%), Gaps = 6/248 (2%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
              +     F ++     V+ ++ + W   V    I         ++    +     +  
Sbjct: 6   ASPWINNPTFRKVLYPAVVAVVVILLWQGSVSYFNIPQFLVPSPVVMLQSLWTHFGSLTM 65

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T+   ++  +++ +I   V   +     + + + P+   L   P     PL++  V
Sbjct: 66  SLLFTLKITLISFLLSIVIGAAVAFVLVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWV 125

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               L+  +  +L+      + I+ N   G  +            H +  +    + +P 
Sbjct: 126 KDTTLSLVVCSTLM----AVFPIISNTTQGLRSVSPGLLSYFQLNHASRLQILIRLRIPS 181

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             PY+      + G +   ++V+E  +        TGL   I ++  +   P +   +L+
Sbjct: 182 ALPYFFGALRISSGLSLIGAVVAEFVAG--TGGNNTGLAYQILQAGYQLDIPLMFAALLL 239

Query: 562 MCCFVLAL 569
           +    +AL
Sbjct: 240 ISLTGIAL 247



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 15/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R++       +  +L+    ++    I +  VP  +V +  +     SL      T    
Sbjct: 16  RKVLYPAVVAVVVILLWQG-SVSYFNIPQFLVPSPVVMLQSLWTHFGSLTMSLLFTLKIT 74

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L + ++S++     A +  ++R +   L P +  +Q  PI+      +++  +     V+
Sbjct: 75  LISFLLSIVIGAAVAFVLVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDTTLSLVV 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + L A+F I +        +  Q L ++   L    +    S  Q    L +P ++P  
Sbjct: 135 CSTLMAVFPIIS--------NTTQGLRSVSPGLLSYFQLNHASRLQILIRLRIPSALPYF 186

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM----LTM 248
              + +S        V +E +          G+   I  A  + D+  +  A+    LT 
Sbjct: 187 FGALRISSGLSLIGAVVAEFVAGTGGNNT--GLAYQILQAGYQLDIPLMFAALLLISLTG 244

Query: 249 LGVIFLYDQLLFRPMIVWSN 268
           + +  +   +  R +  W  
Sbjct: 245 IALFGVMSWMSRRVLSAWHE 264


>gi|13471349|ref|NP_102915.1| ATP-binding protein of ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022091|dbj|BAB48701.1| ATP-binding protein of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 282

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R    E   +      +  +    W  +     I         +V    Y D   + 
Sbjct: 16  RRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRPGVVLQTLYNDAGLLF 75

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+    + + +A I  + + +       +     PFA +L   P    FPL    
Sbjct: 76  SSLLVTLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPL---- 131

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++ Y  N    L L       + IL N   G ++   + +++      T W+  RY+ LP
Sbjct: 132 INIYVNNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDLFKLNGATRWQQLRYLRLP 191

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY++ G   A G +   ++V+E  +      +++GL + I E+  + + P +   + 
Sbjct: 192 AAMPYFLGGLKIAGGLSLIGAVVAEFVAGA--TGQSSGLASRIIEAGYRLNAPRLFAALF 249

Query: 561 IMCCFVLAL 569
           ++    + +
Sbjct: 250 LISLTGILI 258



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 82/215 (38%), Gaps = 10/215 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +  +PR  V +  +  D   L      T      ++ ++++     + L A+S+ + M  
Sbjct: 54  QYILPRPGVVLQTLYNDAGLLFSSLLVTLRITFLSLALAVIGGVGLSVLFAQSKWVEMSF 113

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P   ++Q  PI+       +Y  N     ++ A + A F I +        +    L +
Sbjct: 114 FPFAIVLQVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILS--------NTTLGLNS 165

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + R+L ++ +    + WQ+  YL +P +MP  +  + ++        V +E +       
Sbjct: 166 VDRNLRDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQS 225

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              G+ S I  A    +   +  A+  +     L 
Sbjct: 226 S--GLASRIIEAGYRLNAPRLFAALFLISLTGILI 258


>gi|320322132|gb|EFW78228.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330768|gb|EFW86742.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 288

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 96/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +              V   L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAVYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|28872308|ref|NP_794927.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969377|ref|ZP_03397514.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301386637|ref|ZP_07235055.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062693|ref|ZP_07254234.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302133861|ref|ZP_07259851.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28855562|gb|AAO58622.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213925748|gb|EEB59306.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|330874011|gb|EGH08160.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331016103|gb|EGH96159.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 288

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|260584819|ref|ZP_05852564.1| choline transporter [Granulicatella elegans ATCC 700633]
 gi|260157476|gb|EEW92547.1| choline transporter [Granulicatella elegans ATCC 700633]
          Length = 506

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 11/176 (6%)

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            +I IPV + +     IS  +   A ++   P+     L +  +    L     L L  +
Sbjct: 34  VVIAIPVAVLVSPSKKISGFLLQIAGIIQTLPSLALIGLFIPLMGIGTLPALTTLVLYAL 93

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL N I G         E   +F +T +   +   +    P  ++G  TA    
Sbjct: 94  L----PILQNTITGLQGIDESLVEAGIAFGMTKFERLKKFEIAIAMPVIMSGIRTAAVFI 149

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 150 IGTATLAALIGAG-------GLGSFILLGIDRNNSSLILIGAISAAILAILFNFLL 198



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 75/180 (41%), Gaps = 15/180 (8%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++     A L + S+++   L+ I  I+Q++P L  +         L+   +    L A+
Sbjct: 34  VVIAIPVAVLVSPSKKISGFLLQIAGIIQTLPSLALI--------GLFIPLMGIGTLPAL 85

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +  +    L  I   L E   +F ++ +++     +  +MP ++  +  +
Sbjct: 86  TTLVLYALLPILQNTITGLQGIDESLVEAGIAFGMTKFERLKKFEIAIAMPVIMSGIRTA 145

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 F++ +  +     +I   G+GS+I L I   +   IL   ++   +  L++ LL
Sbjct: 146 A----VFIIGTATLAA---LIGAGGLGSFILLGIDRNNSSLILIGAISAAILAILFNFLL 198


>gi|158424093|ref|YP_001525385.1| ABC transporter [Azorhizobium caulinodans ORS 571]
 gi|158330982|dbj|BAF88467.1| ABC transporter [Azorhizobium caulinodans ORS 571]
          Length = 246

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V     + W  +  GVA       +  +                  T +   V +++++ 
Sbjct: 13  VILAGLVAWEALHLGVANSSLPSPLETLRQMGVLLGDPTFWKQAGQTFYAFAVAVVLSTA 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             I +G+ +G +       +P    L + P    +PLV+                  I  
Sbjct: 73  AGITLGVLLGMKRLAGEVAEPILVNLYSLPKVTLYPLVLLIFGLG----ISARIAFGIMH 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +    +         ++  A+   +T W+    +ILP I P  +TGA         
Sbjct: 129 GLIPLTLFTMNAILQLKPVYRRSAAVMGLTSWQTAVSVILPAILPQVITGARLGVSLCLL 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++ E+ +  +      GLG  +  + E+G  P V+   L++    L  N  L
Sbjct: 189 GVLIGEMFASRN------GLGYMVTHAMERGDMPTVLAVALLIAIVALVANGLL 236



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 90/248 (36%), Gaps = 15/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R +   +  +LA ++    +++          P + +  + + L   +  + A +T    
Sbjct: 5   RHVLGPLLVILAGLVAWEALHL-GVANSSLPSPLETLRQMGVLLGDPTFWKQAGQTFYAF 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+V+S         L    R  G V  PIL  + S+P +      ++ F        +
Sbjct: 64  AVAVVLSTAAGITLGVLLGMKRLAGEVAEPILVNLYSLPKVTLYPLVLLIFG-------L 116

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G      F I    +  +T     ++  +       +    L+ WQ    + +P  +P +
Sbjct: 117 GISARIAFGIMHGLI-PLTLFTMNAILQLKPVYRRSAAVMGLTSWQTAVSVILPAILPQV 175

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +    + +S     V+  EM    +      G+G  +  A++  D+  +L   L +  V 
Sbjct: 176 ITGARLGVSLCLLGVLIGEMFASRN------GLGYMVTHAMERGDMPTVLAVALLIAIVA 229

Query: 253 FLYDQLLF 260
            + + LL 
Sbjct: 230 LVANGLLL 237


>gi|66043608|ref|YP_233449.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63254315|gb|AAY35411.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 311

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 68  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 127

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 128 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 179

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 180 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 239

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 240 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 297

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 298 NIERLTVK 305



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 176 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 235

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 236 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 293

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 294 LLFANIERLTVKR 306


>gi|323483913|ref|ZP_08089288.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Clostridium symbiosum WAL-14163]
 gi|323402751|gb|EGA95074.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Clostridium symbiosum WAL-14163]
          Length = 275

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 99/239 (41%), Gaps = 14/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L ++++  I++  ++       P D++  + + +      +    ++ R+    + +  
Sbjct: 25  FLFWLILWQILSSSINNSIIFVGPADVLASLAVQITTPEFWKTIGLSSFRIFIGFLSAFF 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA +   L  +L P++ + +SIP+  F+   +++          G+E  ++F 
Sbjct: 85  CGIMTGCLAFRFSFLDELLAPVMLLAKSIPVASFVILALIW---------TGSENLSVFI 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            FT  +     +    L +    L E++  FR S  +K   +  P  +P L+ ++  ++ 
Sbjct: 136 AFTIVLPMSYTATLSGLKSTDEKLLEMAFVFRFSFPRKVKAVYFPALLPYLMTSVRTALG 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             +   VA+E+I V         IG  + +A    D   +    L ++ V FL + L  
Sbjct: 196 MSFKSGVAAEVIGVPSHS-----IGEQLYMAKIYLDTAGLFSWTLVIIAVTFLIENLFL 249



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFRVVVLIIIASIIW 401
              I W  +   +   I +     ++     Q      W    ++ FR+ +  + A    
Sbjct: 27  FWLILWQILSSSINNSIIFVGPADVLASLAVQITTPEFWKTIGLSSFRIFIGFLSAFFCG 86

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I  G        +   + P   L  + P   F  L +      +L+  +  ++++     
Sbjct: 87  IMTGCLAFRFSFLDELLAPVMLLAKSIPVASFVILALIWTGSENLSVFIAFTIVLPMS-- 144

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
                  ++G  +      E+A  F  +  R  + +  P + PY +T   TA G ++ + 
Sbjct: 145 ---YTATLSGLKSTDEKLLEMAFVFRFSFPRKVKAVYFPALLPYLMTSVRTALGMSFKSG 201

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +EV       + +  +G  +  +        +    L++      +    
Sbjct: 202 VAAEVIG-----VPSHSIGEQLYMAKIYLDTAGLFSWTLVIIAVTFLIENLF 248


>gi|188589170|ref|YP_001922048.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum E3 str. Alaska E43]
 gi|188499451|gb|ACD52587.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum E3 str. Alaska E43]
          Length = 523

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 19/199 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T+L +     ++++         +  +++   ++ I +I+Q+IP +  L F +
Sbjct: 19  LIEHIKLTSLSV----GLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFAI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +               AI  +    +  +  +    + +I     E +R   L+ +Q  
Sbjct: 75  PFLGIG--------TTPAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQIL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+  +   
Sbjct: 127 VKVQLPLALPVIMSGVRIS------AVTAVGLMTMAAF-IGGGGLGYLVFSGIRTVNNYQ 179

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL   +    +    D L 
Sbjct: 180 ILAGAIPACILALAVDFLF 198



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +  L    +    + + +A II +P+GI I +   ++  +   A ++ A P+       
Sbjct: 14  QIFMLLIEHIKLTSLSVGLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFA 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            ++++  +   I+ N   G  +      E A    +T ++    +
Sbjct: 74  IPFLGIGTT----PAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQILVKV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G   +   A     ++     G       GLG  +       +  +++ 
Sbjct: 130 QLPLALPVIMSGVRISAVTAVGLMTMAAFIGGG-------GLGYLVFSGIRTVNNYQILA 182

Query: 558 GVLIMCCFVLALNRFL 573
           G +  C   LA++   
Sbjct: 183 GAIPACILALAVDFLF 198


>gi|237798034|ref|ZP_04586495.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020885|gb|EGI00942.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 288

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|15615244|ref|NP_243547.1| ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10175302|dbj|BAB06400.1| ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 250

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 11/211 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +    I  ++      + L+   L   T+  + + + ++ ++ I + + + +   +   
Sbjct: 32  YLLPSPIQIVMRTIDLSESLFFTHLPA-TLAIISIGLALSIVLGILLSLLMFWNERVERA 90

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P        P     P+ V    Y   +      LL    T + I  N   G  +   
Sbjct: 91  VYPLLVASQTIPVIALAPIFVLWFGYSIWSKVAVTVLL----TFFPITVNTYDGLKSTNR 146

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            ++E+  +   T  + +  + +P   P ++TG   A   A   + V E            
Sbjct: 147 QYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAVPLAVIGAAVGEWLG------ANE 200

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           GLG +      +   P V   + I+    + 
Sbjct: 201 GLGYFSRRMMTQFDGPGVFAPIFILSLLGIL 231



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 96/251 (38%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  +++  I   ++        P  IV +  I L       +   T   +   + +S++
Sbjct: 14  FLMLMVIWEISARMIGQPYLLPSPIQIV-MRTIDLSESLFFTHLPATLAIISIGLALSIV 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + + L   + R+   + P+L   Q+IP++      V++F          +  + +  
Sbjct: 73  LGILLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWFGY--------SIWSKVAV 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +T + Y  L +  R  EE+  +   +  Q F+ L VP ++P  +  + +++ 
Sbjct: 125 TVLLTFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAVP 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQL 258
                V+ +    VG+ +    G+G +    + + D   +   +     +  + F   + 
Sbjct: 185 LA---VIGA---AVGEWLGANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFAAIKK 238

Query: 259 LFRPMIVWSNK 269
           L   ++ W  K
Sbjct: 239 LENILLPWRKK 249


>gi|87125044|ref|ZP_01080891.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. RS9917]
 gi|86167364|gb|EAQ68624.1| ABC transporter, glycine betaine/proline family, membrane component
           [Synechococcus sp. RS9917]
          Length = 298

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 15/198 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T   +L+A +++L+       L+A+   +  ++ P LD+MQ++P   +L   V
Sbjct: 90  LWAPMITTLSLVLAASLLALIVGLPLGILSARHAMVWRLVRPGLDLMQTMPAFVYLIPAV 149

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F            + +I A     +  +       L  +P DL E  RSF  S  Q  
Sbjct: 150 MLFSTG--------AVPSIIATLIFAMPPVVRLTQLGLSQVPADLLEAGRSFGCSERQLL 201

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P ++P ++  +  ++      VV + MI  G            +   I++ D+  
Sbjct: 202 WKVQMPSALPTVMTGVNQTIMLSLSMVVIASMIGGGGLGDV-------VLRGIQQLDVGL 254

Query: 241 ILYAMLTMLGVIFLYDQL 258
                + ++ +  + D+L
Sbjct: 255 GFEGGIAVVILAVILDRL 272



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 92/285 (32%), Gaps = 15/285 (5%)

Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347
           LF   +   ++G +     + L  + + L + +  +          +       +   + 
Sbjct: 3   LFAAAHQAGWLGKAVDAAVAWLLTHAQVLFQAINGVVLAIVAATEAVLQWPSAWFFALLV 62

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
               +  V  G A   +  +    +      +I     T+  V+   ++A I+ +P+GI 
Sbjct: 63  ALLGLWRVNGGFALFVLLGLNLVLSMDLWAPMI----TTLSLVLAASLLALIVGLPLGIL 118

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                 +   ++P   L+   PA V+    V   S   +   +   +         ++  
Sbjct: 119 SARHAMVWRLVRPGLDLMQTMPAFVYLIPAVMLFSTGAVPSIIATLIF----AMPPVVRL 174

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G S  P D  E   SF  +  +    + +P   P  +TG       + +  +++ + 
Sbjct: 175 TQLGLSQVPADLLEAGRSFGCSERQLLWKVQMPSALPTVMTGVNQTIMLSLSMVVIASMI 234

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G +          +    ++        G + +    + L+R 
Sbjct: 235 GGGGLGDV-------VLRGIQQLDVGLGFEGGIAVVILAVILDRL 272


>gi|257064067|ref|YP_003143739.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
 gi|256791720|gb|ACV22390.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Slackia heliotrinireducens DSM 20476]
          Length = 249

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+    V + +  ++   V + +     +   ++P   +    P     
Sbjct: 45  DWQLLAHHAATTLLEAAVGLALGVLLGFIVAVAMDRFETLYLALEPVVTISQTVPTIAIA 104

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V  + Y  L       +L+I  T + I  ++++G  +   D  ++  + + + W+ +
Sbjct: 105 PLLVLWLGYGLL----PKIVLIIVTTFFPITVSLVSGFKSVDPDVVDLMRTMNASRWQIF 160

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            Y  +P     +  G   +   A   ++++E            GLG Y+    +  S+  
Sbjct: 161 LYAKIPAASDQFFAGLKISATYAIVGAVIAEWLGG------NAGLGVYMTRVRKSFSYDR 214

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +   ++++    L L + +
Sbjct: 215 MFAVIIVISALSLVLMKLI 233



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 91/247 (36%), Gaps = 15/247 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +RI   +  L   +LV          I    +P     +  +  D   L  +A+ T L  
Sbjct: 2   KRIAVPLATLALILLVWQGSVDFGF-IPNFLLPTPTQVVASLANDWQLLAHHAATTLLEA 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              + + +L  F+ A    +   L + L P++ I Q++P +      V++          
Sbjct: 61  AVGLALGVLLGFIVAVAMDRFETLYLALEPVVTISQTVPTIAIAPLLVLWLGYGL----- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L  I  I  +  + +T S+     ++  D+ ++ R+   S WQ F Y  +P +    
Sbjct: 116 ---LPKIVLIIVTTFFPITVSLVSGFKSVDPDVVDLMRTMNASRWQIFLYAKIPAASDQF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      V +E +          G+G Y+    K      +   ++ +  + 
Sbjct: 173 FAGLKISATYAIVGAVIAEWLGGNA------GLGVYMTRVRKSFSYDRMFAVIIVISALS 226

Query: 253 FLYDQLL 259
            +  +L+
Sbjct: 227 LVLMKLI 233


>gi|115377307|ref|ZP_01464515.1| ABC transporter, permease [Stigmatella aurantiaca DW4/3-1]
 gi|115365685|gb|EAU64712.1| ABC transporter, permease [Stigmatella aurantiaca DW4/3-1]
          Length = 224

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   +  +I++ I+ + V   +   P ++  + P        P     PL +    Y 
Sbjct: 30  ITLAETLAGLIVSVILGVAVAAAMHLSPVVNRLVYPVIVASQTIPVIALSPLFLFWFGYS 89

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     +++  T + +  N   G  +   +      +     WR  R +  P   P
Sbjct: 90  FAQK----VAVVVLITFFPVAVNTADGLRSADRELLAWMRASGADRWRILRMVEAPNAMP 145

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           ++ TG   A   +   +++ E           +GLG +   ++     PE+   V+++  
Sbjct: 146 HFFTGLKQAATISVIGAVIGEWLGG------QSGLGIFGRRASSSLKTPELFASVILLAV 199

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
               L       L  +  R  
Sbjct: 200 MGGLL-----FSLVSWAERRF 215



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 76/209 (36%), Gaps = 19/209 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T    L+ +++S++     A     S  +  ++ P++   Q+IP++      +
Sbjct: 24  LLEHLPITLAETLAGLIVSVILGVAVAAAMHLSPVVNRLVYPVIVASQTIPVIALSPLFL 83

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F   +  K        +  +     + +  +    L +  R+L    R+     W+  
Sbjct: 84  FWFGYSFAQK--------VAVVVLITFFPVAVNTADGLRSADRELLAWMRASGADRWRIL 135

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P +MP     +  +        ++    V+G+ +    G+G +   A        
Sbjct: 136 RMVEAPNAMPHFFTGLKQA------ATISVIGAVIGEWLGGQSGLGIFGRRASSSLKTPE 189

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +++ +  +  L   L     + W+ +
Sbjct: 190 LFASVILLAVMGGLLFSL-----VSWAER 213


>gi|291303052|ref|YP_003514330.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290572272|gb|ADD45237.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 268

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 26/253 (10%)

Query: 347 FWFCVVCGVAIGIAWQSI-----GYIVNHFTYQDVLYVIWLGCITMFR--------VVVL 393
             + +   V    AW+       G ++  FT   V  V  LG   ++R        +V+ 
Sbjct: 19  LPYQLATLVVFAAAWEIYARVSGGLLIPSFTETAVATVELLGTAELWRAVYVSNQALVLG 78

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
              A +I IPVGI +G    +   +  +  +L   P     PL+V  V +   +  + ++
Sbjct: 79  FGAAVVIGIPVGILLGRFRLLERYLDVYLNILLITPMAAIIPLLVMSVGFGLASRVILVA 138

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  I      ++ N   G         E+A SF  +  + W  I+LPG  P  +TG    
Sbjct: 139 VFAIVM----VVVNARTGVRQVDPALIEMARSFGASERQIWTRILLPGALPAIMTGIRLG 194

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV---VLGVLIMCCFVLALN 570
            G A    ++ E+       + +T LG  I E       P +   ++ +L     ++++ 
Sbjct: 195 IGRAITGMVIVELL------MVSTALGGLILEYRGLFKAPLLYGTIVIILAEAILLISVA 248

Query: 571 RFLWHPLYLYGTR 583
           R+    L  +   
Sbjct: 249 RWGERKLTRWAET 261



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    L +    +   ++     +++       L  + R L   L   L+I+   P+   
Sbjct: 59  LGTAELWRAVYVSNQALVLGFGAAVVIGIPVGILLGRFRLLERYLDVYLNILLITPMAAI 118

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+        +VI   + AI  +          +    +  +   L E++RSF  S
Sbjct: 119 IPLLVMSVGFGLASRVILVAVFAIVMV--------VVNARTGVRQVDPALIEMARSFGAS 170

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q +  + +P ++P ++  + + +      +V  E+++V         +G  I      
Sbjct: 171 ERQIWTRILLPGALPAIMTGIRLGIGRAITGMVIVELLMVSTA------LGGLILEYRGL 224

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
                    +L    VI L + +L   +  W  +
Sbjct: 225 FKAP-----LLYGTIVIILAEAILLISVARWGER 253


>gi|159029962|emb|CAO90341.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 509

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 12/203 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +             AM +  L       L ++   L   ++ I++ +Q+IP L     
Sbjct: 10  GEIAFRTGEHLFLTGIAMAMGSLIGIPLGILISRQAILAQPIIAIVNTLQTIPSLALF-- 67

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               F+   P      ++ AI A+    +  +  + Y  +  +  +L+    S  ++  Q
Sbjct: 68  ---GFLISVPFLGGIGKIPAIVALTLYTLLPIVLNTYLGIKKVDPELKLAGLSLGMTDGQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P +   ++  + ++        V +  +      I   G+G +I   I   + 
Sbjct: 125 ILRYIELPLAGATILAGVRIA-------TVIAIGVATIAAAIGGGGLGVFIFRGIATVNN 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   +    +  + D  L R
Sbjct: 178 QLILAGAIPAAFLALVADWSLGR 200



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 8/193 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F       + +     +F   + + + S+I IP+GI I  +  ++  I      L  
Sbjct: 1   MDSFWLDYGGEIAFRTGEHLFLTGIAMAMGSLIGIPLGILISRQAILAQPIIAIVNTLQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F  ++S      +   +   + +   T   I+ N   G      + K    S  
Sbjct: 61  IPSLALFGFLISVPFLGGIG-KIPAIVALTLYTLLPIVLNTYLGIKKVDPELKLAGLSLG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T  +  RYI LP      + G   A       ++++   +     +   GLG +I    
Sbjct: 120 MTDGQILRYIELPLAGATILAGVRIA-------TVIAIGVATIAAAIGGGGLGVFIFRGI 172

Query: 548 EKGSFPEVVLGVL 560
              +   ++ G +
Sbjct: 173 ATVNNQLILAGAI 185


>gi|284028182|ref|YP_003378113.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283807475|gb|ADB29314.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 285

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 90/258 (34%), Gaps = 22/258 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           P  F      +++  I  +         +  + P  +V      +    L      +T R
Sbjct: 36  PIRFGAAIGPVLLLAIWSIGSAAGWLDPRVLSAPWTVVTTTGDLIADGRLQSNLLTSTQR 95

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               + + +L   V A  +  SR    VL   + I ++IP         +  + L    +
Sbjct: 96  AFVGLGLGILLGTVLALASGLSRIGEAVLDGPIQIKRAIPS--------LALLPLLILWL 147

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E   I  I       +    +  L  I     E++++  LS W     + +P ++PG
Sbjct: 148 GIGETMKITTITLGVFVPIYIHTHNGLRTIDSRYVELAQTVGLSRWTFVRRVVLPGALPG 207

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +  +++G W  +V  E I          GIG  + LA        I+  ++    +
Sbjct: 208 FLLGLRFAVTGAWLSLVVVEQI------NSTSGIGYMMELARTYGQTDIIIVGLVLYGIL 261

Query: 252 IFLYD---QLLFRPMIVW 266
             L D   +L+ R  + W
Sbjct: 262 GLLSDGAVRLIQRKALSW 279



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 19/265 (7%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  R    +         +L   + + +   I    ++   +IG A   +   V    + 
Sbjct: 12  RAKREQQAVTTRPVRRRRRLGPGKPIRFGAAIGPVLLLAIWSIGSAAGWLDPRVLSAPWT 71

Query: 375 DVLYVIWLG---------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            V     L            +  R  V + +  ++   + +  G      + +    Q+ 
Sbjct: 72  VVTTTGDLIADGRLQSNLLTSTQRAFVGLGLGILLGTVLALASGLSRIGEAVLDGPIQIK 131

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P+    PL++  +              +  G    I  +   G     + + E+A +
Sbjct: 132 RAIPSLALLPLLILWLGIGET----MKITTITLGVFVPIYIHTHNGLRTIDSRYVELAQT 187

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++ W + R ++LPG  P ++ G   A  GAW + +V E  +       T+G+G  +  
Sbjct: 188 VGLSRWTFVRRVVLPGALPGFLLGLRFAVTGAWLSLVVVEQIN------STSGIGYMMEL 241

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN 570
           +   G    +++G+++     L  +
Sbjct: 242 ARTYGQTDIIIVGLVLYGILGLLSD 266


>gi|322392409|ref|ZP_08065870.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
 gi|321144944|gb|EFX40344.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
          Length = 505

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 20/203 (9%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++  T   A      ++    ++ +  I Q+IP +  L         L+   +    L 
Sbjct: 32  VAIFLTIPLAVYLNSHKKAANWVLQVAGIFQTIPSMALL--------GLFIPLMGIGTLP 83

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    ++ +  +   +L  I   LEE   +F ++ W++     +P +MP +V  + 
Sbjct: 84  ALTALVIYAIFPILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVR 143

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                    ++ +  +     ++   G+GS+I L I  ++   IL   ++   +      
Sbjct: 144 T----ATVMIIGTATLAA---LVGAGGLGSFILLGIDRRNASLILIGAISSAILAI---- 192

Query: 258 LLFRPMIVWSNKFRLERTTGIYP 280
            LF  ++ W  K +L      + 
Sbjct: 193 -LFNAVLKWLEKAKLRTIVAAFA 214



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++      ++ +   A +    P+     L +  +    L     L + 
Sbjct: 32  VAIFLTIPLAVYLNSHKKAANWVLQVAGIFQTIPSMALLGLFIPLMGIGTLPALTALVIY 91

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            IF     IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 92  AIF----PILENTITALNGIDPSLEEAGVAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNASLILIGAISSAILAILFNAVL 198


>gi|322390493|ref|ZP_08064011.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
 gi|321142767|gb|EFX38227.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
          Length = 252

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 97/244 (39%), Gaps = 17/244 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV+  +   L+ + +  +P  +        D   L  ++  T    L  +VI +L    
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +A L    + +  ++ P + ++Q+IP +      V++F            L  +  I  +
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYGM--------LPKLVLIIIT 131

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            V+ +  S+     +  +D+  + +  + + +Q   +  +P ++P     + +S+S  + 
Sbjct: 132 VVFPIVVSLLDGFRHCDQDILRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFI 191

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             V SE +          G+G Y+  +    +   + AI+  +  +  +       L R 
Sbjct: 192 STVVSEWLGG------FDGLGVYMIQSKKLFQYDTMFAIIVLISAISLLGMFLVDQLERT 245

Query: 263 MIVW 266
           ++ W
Sbjct: 246 ILKW 249



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W        +          + +   +D   +I     T+   ++ ++I  ++   
Sbjct: 20  LLVLWQLAGFLNILPKFVLPTPLEIGNAFVRDRALLIHHSLSTLQVALIGLVIGVLLAAG 79

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             I +     ++  + PF  ++   P     P++V    Y      L   +L+I    + 
Sbjct: 80  FAILMDSFQWVNDLVYPFMVVIQTIPTIALAPILVLWFGYG----MLPKLVLIIITVVFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   +        ++   +  +P   PY+  G   +   A+ +++V
Sbjct: 136 IVVSLLDGFRHCDQDILRLFQIMQANRFQTLVHYKIPAALPYFFAGLRVSVSYAFISTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           SE            GLG Y+ +S +   +  +   ++++    L 
Sbjct: 196 SEWLGGFD------GLGVYMIQSKKLFQYDTMFAIIVLISAISLL 234


>gi|251799370|ref|YP_003014101.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546996|gb|ACT04015.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 249

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++  ++ +  + +  +   IWI         I P        P     P++V    Y
Sbjct: 57  ALTLWEALLGLAFSVVFGVLSAIWIDSSSLARKTIYPLIVASQTIPIIALSPIMVMWFGY 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       ++I  T + +  N   G      +  E+  S      + +    +P   
Sbjct: 117 EIGSK----ISVVILFTFFPVAVNTADGFRVADREIGELLRSMGAGKAQLFLKWKIPSAL 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P + TG   A   +   + + E           +GLG Y   +       +V  GVL++ 
Sbjct: 173 PSFFTGLKMAAAISVGGATLGEWLGGE------SGLGVYTKRAANMLRGDDVFAGVLLLS 226

Query: 564 CFVLAL 569
              +AL
Sbjct: 227 LMGIAL 232



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++ + T    L  +  S++F  + A     S      + P++   Q+IPI+      V++
Sbjct: 54  KHFALTLWEALLGLAFSVVFGVLSAIWIDSSSLARKTIYPLIVASQTIPIIALSPIMVMW 113

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      K        I  +     + +  +         R++ E+ RS      Q F  
Sbjct: 114 FGYEIGSK--------ISVVILFTFFPVAVNTADGFRVADREIGELLRSMGAGKAQLFLK 165

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             +P ++P     + M+ +      ++     +G+ +    G+G Y   A        + 
Sbjct: 166 WKIPSALPSFFTGLKMAAA------ISVGGATLGEWLGGESGLGVYTKRAANMLRGDDVF 219

Query: 243 YAMLTMLGVIFLY 255
             +L +  +    
Sbjct: 220 AGVLLLSLMGIAL 232


>gi|33595899|ref|NP_883542.1| transmembrane permease ABC transporter protein [Bordetella
           parapertussis 12822]
 gi|33565978|emb|CAE36529.1| probable transmembrane permease ABC transporter protein [Bordetella
           parapertussis]
          Length = 264

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   V+   I ++  +  G+W+G  P  S+ + P+ +   + P  +  P+        
Sbjct: 66  VTLSETVLAFFIGTVSGLGFGLWLGLSPGTSAILDPYIKAANSMPRVILAPIFGMWFGLG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G         + A        +  R++ LP    
Sbjct: 126 IWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGARRRQLLRHVYLPSATS 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++  
Sbjct: 182 WVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIVVLTA 235

Query: 565 FVLALNRFL 573
           F L L+  +
Sbjct: 236 FALLLDYVV 244



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 17/225 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
              I    +    +  +   T    + A  I  +    +      S     +L P +   
Sbjct: 47  WGRIWAWFVSNGDIYGHLWVTLSETVLAFFIGTVSGLGFGLWLGLSPGTSAILDPYIKAA 106

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            S+P +       ++F      KV  A     F +F        F++YQ +  +   L +
Sbjct: 107 NSMPRVILAPIFGMWFGLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLD 158

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R       Q   ++ +P +   +  ++  S+   +   V  E +          G+G 
Sbjct: 159 NARMLGARRRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGY 212

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            I  A    D+  +   ++ +     L D ++    + ++ W  K
Sbjct: 213 LILQAEGTFDVNTVFAGIVVLTAFALLLDYVVGMGEKRLMKWQPK 257


>gi|307244485|ref|ZP_07526594.1| ABC transporter, substrate-binding protein, QAT family
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492178|gb|EFM64222.1| ABC transporter, substrate-binding protein, QAT family
           [Peptostreptococcus stomatis DSM 17678]
          Length = 513

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
             +++ I+++         ++  ++   ++ +++I  +IP +  L F +           
Sbjct: 27  TFTSVFIAIIVGLFIGIFISQKPKIAAYIISVVNIAYTIPSIALLGFLISITGIGNT--- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI A+    +  +  S Y  +  I  ++ E SR+     +Q  + + +P + P 
Sbjct: 84  -----TAIIALSIYALLPIVRSTYIGISTIDPNIIEASRAMGSKEFQILYKIKLPLAFPV 138

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +  ++M         V  +  +    + +   G+G  I   I   + + IL     +  +
Sbjct: 139 IFSSIM-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNDVLILIGSFLIALL 191

Query: 252 IFLYDQLL 259
             + D +L
Sbjct: 192 ALVVDGIL 199



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + IA I+ + +GI+I  +P I++ I     +    P+      ++S     + 
Sbjct: 24  IYITFTSVFIAIIVGLFIGIFISQKPKIAAYIISVVNIAYTIPSIALLGFLISITGIGNT 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + LS+  +      I+ +   G S    +  E + +     ++    I LP  FP  
Sbjct: 84  TAIIALSIYALL----PIVRSTYIGISTIDPNIIEASRAMGSKEFQILYKIKLPLAFPVI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            +  +       N   ++   +     +   GLG  I       +   +++G  ++    
Sbjct: 140 FSSIM-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNDVLILIGSFLIALLA 192

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 193 LVVDGIL 199


>gi|237735738|ref|ZP_04566219.1| ABC glycine betaine transporter permease [Mollicutes bacterium D7]
 gi|229381483|gb|EEO31574.1| ABC glycine betaine transporter permease [Coprobacillus sp. D7]
          Length = 513

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++I+ +   +   + ++ ++    ++ I++ M +IP +  L F + +          
Sbjct: 28  LIAIIIATVIGLILGVIISEYKKSSKTILGIINFMYTIPSISLLGFLIPFSGIGN----- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + Y  + NI  ++ E +     + WQ  + + +P ++P +
Sbjct: 83  ---STAIIALSVYALLPMVRNTYTGIINIDDNIIEAATGMGSTRWQILYKIKLPLALPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +             V  +  +    + I   G+G  I   I   +    L   L +  + 
Sbjct: 140 MSGFR-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTLTGSLLIAILA 192

Query: 253 FLYDQLL 259
            + D +L
Sbjct: 193 LITDIVL 199



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ IIIA++I + +G+ I      S  I      +   P+      ++      +    +
Sbjct: 28  LIAIIIATVIGLILGVIISEYKKSSKTILGIINFMYTIPSISLLGFLIPFSGIGNSTAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            LS+  +      ++ N   G     ++  E A+    T W+    I LP   P  ++G 
Sbjct: 88  ALSVYALL----PMVRNTYTGIINIDDNIIEAATGMGSTRWQILYKIKLPLALPVIMSGF 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N   ++   +     +   GLG  I       +    + G L++    L  +
Sbjct: 144 R-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTLTGSLLIAILALITD 196

Query: 571 RFL 573
             L
Sbjct: 197 IVL 199


>gi|210617726|ref|ZP_03291720.1| hypothetical protein CLONEX_03944 [Clostridium nexile DSM 1787]
 gi|210149168|gb|EEA80177.1| hypothetical protein CLONEX_03944 [Clostridium nexile DSM 1787]
          Length = 252

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 10/165 (6%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G  +G    +   + P     +  P+ +  P V+                L+++   W  
Sbjct: 82  GTIMGLNQRVREILHPVIYAFSVVPSILLSPFVLLLAPTLFS----ASVFLIVYNIVWAT 137

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           LF  I G       + + A++  + G +    +ILP   P  + G + +   ++   + +
Sbjct: 138 LFATITGIMTIDKRYLDKAATLELKGMKRITKVILPAASPSILAGFVNSLRSSFVMLVYA 197

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           E+   G       G+G ++ +  E G F    +G + M   ++ +
Sbjct: 198 EMYGAGE------GMGYFVKKYAELGIFANTWVGFVFMVIILVIV 236



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 75/184 (40%), Gaps = 17/184 (9%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            T+   ++R+  +L P++     +P +    F ++               A++F I  + 
Sbjct: 82  GTIMGLNQRVREILHPVIYAFSVVPSILLSPFVLLL--------APTLFSASVFLIVYNI 133

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           VW   F+    +  I +   + + +  L G ++   + +P + P ++   + S+   +  
Sbjct: 134 VWATLFATITGIMTIDKRYLDKAATLELKGMKRITKVILPAASPSILAGFVNSLRSSFVM 193

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPM 263
           +V +EM   G+      G+G ++    +           + M+ ++ +  Q   LL + +
Sbjct: 194 LVYAEMYGAGE------GMGYFVKKYAELGIFANTWVGFVFMVIILVIVMQAFELLKKHL 247

Query: 264 IVWS 267
           + W+
Sbjct: 248 LKWT 251


>gi|116255813|ref|YP_771646.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260461|emb|CAK03565.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 264

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+  F+       +     T+   ++   ++ +I IP+ + +   P +S  + P   ++ 
Sbjct: 52  ILGSFSSIGFERWMGHIAATLRVALIGYAMSIVIAIPLAVVMMRSPFLSRTLYPLLVVVQ 111

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+++  +            ++    T + ++ +   G +A P +  E++ S 
Sbjct: 112 STPVVAIAPIIIVVLGAGDA----PRIVITCLITFFPLVVSTATGLAATPPELIELSRSL 167

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +G+R    I LP   PY  +    +   A   ++V+E  +         G+G +I  S
Sbjct: 168 RASGFREITQIRLPFAVPYIFSALKISITLAVIGAVVAEFCA------SEAGVGYFIQLS 221

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           T     P+   G+L++    L L
Sbjct: 222 TSLFKLPQAWAGLLVLAAMSLLL 244



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L+      LL        P   +     ++       + + T    L    +S++
Sbjct: 25  LIGTALLWEAAARLLSIPTYLLPPPSAILGSFSSIGFERWMGHIAATLRVALIGYAMSIV 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +  +S  L   L P+L ++QS P++      +V        +        I  
Sbjct: 85  IAIPLAVVMMRSPFLSRTLYPLLVVVQSTPVVAIAPIIIVVLGAGDAPR--------IVI 136

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +  S    L   P +L E+SRS R SG+++   + +PF++P +   + +S++
Sbjct: 137 TCLITFFPLVVSTATGLAATPPELIELSRSLRASGFREITQIRLPFAVPYIFSALKISIT 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V +E            G+G +I L+     L      +L +  +  L  Q +
Sbjct: 197 LAVIGAVVAEFCA------SEAGVGYFIQLSTSLFKLPQAWAGLLVLAAMSLLLFQAV 248


>gi|315425079|dbj|BAJ46751.1| sulfonate/nitrate/taurine transport system permease protein
           [Candidatus Caldiarchaeum subterraneum]
          Length = 229

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 76/217 (35%), Gaps = 13/217 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                +   +I     T+   ++   ++ +  + +G+ +G+   I   + P        P
Sbjct: 23  EVMLANFPIIIRHSYATLEATLIGFGLSIVFGLLLGLAVGYSSIIYRAVYPLLVAFNTIP 82

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V           +   L     + + I+ NV    +    + ++V  S   +
Sbjct: 83  KVAIVPILVIWFGIG----KVPAVLTAFLISFFPIVVNVAVALATIEPEIRDVLRSLGAS 138

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + +  I +P   PY+      A   A+  +++SE  +         G G  +  ++ +
Sbjct: 139 KTQLFVKIGVPRSMPYFFGSLKVASTLAFVGAVISESVA------SNEGTGYLMIAASSR 192

Query: 550 GSFPEVVLGVLIMCCFVL---ALNRFLWHPLYLYGTR 583
              P V  G+L++    +    +   L   L  +  R
Sbjct: 193 FDVPLVFAGLLVISFIGISLFLVFALLEKRLVGWAYR 229



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 17/243 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G     +  I E  +P     +  +  +   + +++  T    L    +S++F  +    
Sbjct: 1   GQAVTRIFAIPEFILPSPSRTVEVMLANFPIIIRHSYATLEATLIGFGLSIVFGLLLGLA 60

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S  +   + P+L    +IP +  +   V++F           ++ A+   F    + 
Sbjct: 61  VGYSSIIYRAVYPLLVAFNTIPKVAIVPILVIWFGIG--------KVPAVLTAFLISFFP 112

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  ++  +L  I  ++ +V RS   S  Q F  +GVP SMP    ++ ++ +  +   V 
Sbjct: 113 IVVNVAVALATIEPEIRDVLRSLGASKTQLFVKIGVPRSMPYFFGSLKVASTLAFVGAVI 172

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI---FLYDQLLFRPMIVW 266
           SE +   +      G G  +  A    D+  +   +L +  +    FL   LL + ++ W
Sbjct: 173 SESVASNE------GTGYLMIAASSRFDVPLVFAGLLVISFIGISLFLVFALLEKRLVGW 226

Query: 267 SNK 269
           + +
Sbjct: 227 AYR 229


>gi|307300218|ref|ZP_07580003.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|306905107|gb|EFN35690.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 253

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     +   +LP +   T  R++ A V +++       L  +   +   L 
Sbjct: 36  LPQPWSLWEPFVQAVSSGALPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLD 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P L  +    ++            E AAI A+  +++ N+   + +    +
Sbjct: 96  PWLVVFLNLPALVLIVLCYIWIGLN--------ETAAITAVVLNKIPNVATLLREGARAL 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL+ ++  +R+    +  ++ +P   P +       ++  W  V+  E +        
Sbjct: 148 DPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAVIWKIVLVVEFLG------R 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I    +  ++  +L   L+ +GV+ L +    +P      ++R
Sbjct: 202 SSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAERRVRRWR 251



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 14/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +T++RV+   + A +I + +G  +G    +   + P+  +    PA V   L  
Sbjct: 55  LPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCY 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +              ++      +   +  GA A   D   +A+ + +      R++I
Sbjct: 115 IWIGL----NETAAITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVI 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P+    A +     W   +V E         R++G+G  I    +  +   V++ 
Sbjct: 171 MPQLAPFIAAAARSGIAVIWKIVLVVEFLG------RSSGIGFQIHFYFQLFNVAMVLVY 224

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            L     +L +  F   P      R +R
Sbjct: 225 ALSFIGVMLLVEAFFLQP----AERRVR 248


>gi|317154922|ref|YP_004122970.1| binding-protein-dependent transporter inner membrane component
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316945173|gb|ADU64224.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio aespoeensis Aspo-2]
          Length = 256

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 77/241 (31%), Gaps = 10/241 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
             C     + ML + W+       +          V      D    I     T+ + ++
Sbjct: 7   PRCGGYAFAAMLILVWWAGTASNVLARGQIPSPGDVLLALTDDPRLFINAIFKTVRQTMI 66

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              I +   + +G+  G  P + +   P  + L   P+    P+ +  V       +   
Sbjct: 67  AFAIGAAAGLTLGLCHGVFPTLRNTTGPCIEGLRPLPSIALIPIAIVFVGMG----DSLN 122

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             +  F   W I  N   G         + A +  IT  R ++ +IL    P  +TG   
Sbjct: 123 VTIAAFACAWPIFINTHDGVKGINPLLFDTAFTIGITRRRLFQSVILQAALPMAMTGLRI 182

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G A+   +  E+       +  TG+GA    +   G    +   +       L LN+ 
Sbjct: 183 GLGIAFAVEVSVEMV------IPKTGIGALATTAALSGHNALLYATIAAAAMTGLMLNQA 236

Query: 573 L 573
            
Sbjct: 237 F 237



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 17/250 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETT---VPRDIVDIVPITLDVHSLPQYASRTT 69
           R          AF  ++ ++              +P     ++ +T D         +T 
Sbjct: 2   RMSLSPRCGGYAFAAMLILVWWAGTASNVLARGQIPSPGDVLLALTDDPRLFINAIFKTV 61

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            + + A  I                 L     P ++ ++ +P +  +   +V+       
Sbjct: 62  RQTMIAFAIGAAAGLTLGLCHGVFPTLRNTTGPCIEGLRPLPSIALIPIAIVFVG----- 116

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +G  L    A F    W +  + +  +  I   L + + +  ++  + F  + +  ++
Sbjct: 117 --MGDSLNVTIAAFACA-WPIFINTHDGVKGINPLLFDTAFTIGITRRRLFQSVILQAAL 173

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P  +  + + +   +   V+ EM+      IP  GIG+    A        +   +    
Sbjct: 174 PMAMTGLRIGLGIAFAVEVSVEMV------IPKTGIGALATTAALSGHNALLYATIAAAA 227

Query: 250 GVIFLYDQLL 259
               + +Q  
Sbjct: 228 MTGLMLNQAF 237


>gi|315179291|gb|ADT86205.1| binding-protein-dependent transport systems inner membrane
           component [Vibrio furnissii NCTC 11218]
          Length = 260

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 13/206 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I       + +  L  +W    T+   +    ++  + IP+ I +     ++  I P   
Sbjct: 45  IALAFTQVSAERWLDNLW---ATLRIALFGFALSFALSIPLAIMMVNSKFLTRAIFPLLV 101

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++ + P     PL++  +             +    T + ++ +   G  A P +  E++
Sbjct: 102 VIQSTPVVAIAPLLIVILGTGDA----PRLAITCLITFFPLVVSATTGMLATPPELIELS 157

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S +++  +    I LP   P+  +G   A   A   S+++E  +         GLG  +
Sbjct: 158 RSLNVSNHKTIWQIRLPYAIPHIFSGVKVAITLAVIGSVIAEFVAAEK------GLGYLV 211

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
             ST     P+    ++ +    + L
Sbjct: 212 QFSTSYFKIPQAFAALVFLSVVSMVL 237



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 14/189 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L    +S   +   A +   S+ L   + P+L ++QS P++      +V     
Sbjct: 63  ATLRIALFGFALSFALSIPLAIMMVNSKFLTRAIFPLLVVIQSTPVVAIAPLLIVILGTG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              ++    L   F         +  S    +   P +L E+SRS  +S  +  W + +P
Sbjct: 123 DAPRLAITCLITFF--------PLVVSATTGMLATPPELIELSRSLNVSNHKTIWQIRLP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +++P +   + ++++      V +E +          G+G  +  +     +     A++
Sbjct: 175 YAIPHIFSGVKVAITLAVIGSVIAEFVA------AEKGLGYLVQFSTSYFKIPQAFAALV 228

Query: 247 TMLGVIFLY 255
            +  V  + 
Sbjct: 229 FLSVVSMVL 237


>gi|319783021|ref|YP_004142497.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168909|gb|ADV12447.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 283

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 92/249 (36%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R    E   +      +  +    W  +     I         +V    Y D   + 
Sbjct: 17  RRVRQARFERIGRWVLPLAIMILAIWLWDRICVWNEIPQYILPRPGVVLWTLYNDAGLLF 76

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+    + + +A I  + + +       +     PFA +L   P    FPL    
Sbjct: 77  SSLLVTLRITFLSLALAVIGGVGLAVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPL---- 132

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           ++ Y  +    L L       + IL N   G ++   + +++      T W+  RY+ LP
Sbjct: 133 INIYVNDQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDMFKLNGATRWQQLRYLRLP 192

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY++ G   A G +   ++V+E  +      +++GL + I E+  + + P +   + 
Sbjct: 193 AAMPYFLGGLKIAGGLSLIGAVVAEFVAG--TTGQSSGLASRIIEAGYRLNAPRLFAALF 250

Query: 561 IMCCFVLAL 569
           ++    + +
Sbjct: 251 LISLTGILI 259



 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 83/215 (38%), Gaps = 10/215 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +  +PR  V +  +  D   L      T      ++ ++++     A L A+S+ + M  
Sbjct: 55  QYILPRPGVVLWTLYNDAGLLFSSLLVTLRITFLSLALAVIGGVGLAVLFAQSKWVEMSF 114

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P   ++Q  PI+       +Y  +     ++ A + A F I +        +    L +
Sbjct: 115 FPFAIVLQVTPIVAIFPLINIYVNDQTTKLLLCAWIVAFFPILS--------NTTLGLNS 166

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + R+L ++ +    + WQ+  YL +P +MP  +  + ++        V +E   V  T  
Sbjct: 167 VDRNLRDMFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEF--VAGTTG 224

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              G+ S I  A    +   +  A+  +     L 
Sbjct: 225 QSSGLASRIIEAGYRLNAPRLFAALFLISLTGILI 259


>gi|257481881|ref|ZP_05635922.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331009513|gb|EGH89569.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 288

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|166365577|ref|YP_001657850.1| glycine/betaine transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166087950|dbj|BAG02658.1| glycine/betaine transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 509

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 71/204 (34%), Gaps = 12/204 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +             AM +  L       L ++   L   ++ I++ +Q+IP L    
Sbjct: 9   AGEIAFRTGEHLFLTGIAMAMGSLIGIPLGILISRQAILAPPIIAIVNTLQTIPSLALF- 67

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                F+   P      ++ AI A+    +  +  + Y  +  +  +L+    S  ++  
Sbjct: 68  ----GFLISVPFLGGIGKIPAIVALTLYTLLPIVLNTYLGIKKVDPELKLAGLSLGMTDG 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q   Y+ +P +   ++  + ++        V +  +      I   G+G +I   I   +
Sbjct: 124 QILRYIELPLARATILAGVRIA-------TVIAIGVATIAAAIGGGGLGVFIFRGIATVN 176

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
              IL   +    +  + D  L R
Sbjct: 177 NQLILAGAIPAAFLALVADWSLGR 200



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 8/193 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F       + +     +F   + + + S+I IP+GI I  +  ++  I      L  
Sbjct: 1   MDSFWLDYAGEIAFRTGEHLFLTGIAMAMGSLIGIPLGILISRQAILAPPIIAIVNTLQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F  ++S      +   +   + +   T   I+ N   G      + K    S  
Sbjct: 61  IPSLALFGFLISVPFLGGIG-KIPAIVALTLYTLLPIVLNTYLGIKKVDPELKLAGLSLG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T  +  RYI LP      + G   A       ++++   +     +   GLG +I    
Sbjct: 120 MTDGQILRYIELPLARATILAGVRIA-------TVIAIGVATIAAAIGGGGLGVFIFRGI 172

Query: 548 EKGSFPEVVLGVL 560
              +   ++ G +
Sbjct: 173 ATVNNQLILAGAI 185


>gi|229591154|ref|YP_002873273.1| putative inner membrane component of binding-protein-dependent
           transport system [Pseudomonas fluorescens SBW25]
 gi|229363020|emb|CAY49984.1| putative inner membrane component of binding-protein-dependent
           transport system [Pseudomonas fluorescens SBW25]
          Length = 336

 Score = 87.3 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 65/179 (36%), Gaps = 10/179 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +   +   + + +I     G+ IG+   I   + P  ++L   P+    PL         
Sbjct: 142 SALLLGSGVALGAITGFIAGVAIGWSTRIGYWLHPVLRILGPVPSTALLPLCFFLFP--- 198

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+   T + +     +G ++    + +VA +           + +P   P+
Sbjct: 199 -SSWSASVFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGAKQGFLIFKVAIPAALPH 257

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              G     G +++  +V+E+          +G+G Y+  +    ++  +   +LIM  
Sbjct: 258 VFVGLFMGLGASFSTLVVAEMMG------VKSGIGWYLQWAQGWAAYANMYAALLIMAL 310



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      + L + S + +  +  F+       S R+G  L P+L I+  +P    L
Sbjct: 131 DYARLADSLLHSALLLGSGVALGAITGFIAGVAIGWSTRIGYWLHPVLRILGPVPSTALL 190

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F          +  A++F I  +  + +T   +  + ++ +   +V+R+     
Sbjct: 191 PLCFFLF--------PSSWSASVFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGAKQ 242

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P ++P +   + M +   +  +V +EM+ V        GIG Y+  A    
Sbjct: 243 GFLIFKVAIPAALPHVFVGLFMGLGASFSTLVVAEMMGVKS------GIGWYLQWAQGWA 296

Query: 237 DLLAILYAMLTMLGV--IFLYDQLLFR-PMIVWS 267
               +  A+L M       +    L R  ++ W 
Sbjct: 297 AYANMYAALLIMALACSGLITGLFLVRDRLLAWQ 330


>gi|34763224|ref|ZP_00144187.1| Hydroxymethylpyrimidine transport system permease protein
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27887104|gb|EAA24212.1| Hydroxymethylpyrimidine transport system permease protein
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 257

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 83/233 (35%), Gaps = 10/233 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W        +          + +   +D    ++   ITM   ++ + +  +I  
Sbjct: 16  ILIAIWQVCGNLGLLPKFIFPTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIAS 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     I+  + P        P     P++V  + Y          +L++  T +
Sbjct: 76  LLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWLGY----DMTPKIVLIVINTTF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D  ++    + + W+   ++ +P    Y+  G   +   A+ +++
Sbjct: 132 PIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           VSE            GLG ++  + +   +  +   ++++    L     +  
Sbjct: 192 VSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238


>gi|291561138|emb|CBL39937.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 259

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 85/214 (39%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++ + +        + ++   T   +L   VI ++   V   + AK R +  +++
Sbjct: 37  LPGPAELANSMVKLFVSGDVMKHIRVTMEEILVGTVIGIVIGLVLGYIMAKIRFIERLIM 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + I+Q+ P +      +++       K     L   F         +  +   ++ +I
Sbjct: 97  PFVIIIQTAPKISLAPLFILWMGLGIESKAALVILVVSF--------PIMINEVSAIRSI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             ++  + +  + S WQ F  + VP+S+  ++  + ++++      V  EMI        
Sbjct: 149 EDNVYNLMKVLKASKWQTFCKIEVPYSIEMMLSGIKLALTQAMTGAVIGEMIGAKA---- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  + L  +  D+  IL A++ +  +    
Sbjct: 205 --GLGYLLTLGSETYDIKMILNAVILLSVIGLAL 236



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V+    +TM  ++V  +I  +I + +G  +     I   I PF  ++   P     PL
Sbjct: 54  GDVMKHIRVTMEEILVGTVIGIVIGLVLGYIMAKIRFIERLIMPFVIIIQTAPKISLAPL 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +     +     + L+I    + I+ N ++   +  ++   +      + W+ +  
Sbjct: 114 FILWMGLGIESK----AALVILVVSFPIMINEVSAIRSIEDNVYNLMKVLKASKWQTFCK 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I +P      ++G   A   A   +++ E+           GLG  +   +E      ++
Sbjct: 170 IEVPYSIEMMLSGIKLALTQAMTGAVIGEMIG------AKAGLGYLLTLGSETYDIKMIL 223

Query: 557 LGVLIMCCFVLAL 569
             V+++    LAL
Sbjct: 224 NAVILLSVIGLAL 236


>gi|226308524|ref|YP_002768484.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226187641|dbj|BAH35745.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 333

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P    +      +   L      T   +L A V++     V         R    L P 
Sbjct: 116 TPSQSWNYFTGAAESGELWSNTKATMAAVLIAWVLASAVGVVVGVALGLLPRTERALTPY 175

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L+   ++P +      +V F      KV  A    +F +  S            + +   
Sbjct: 176 LEAANAMPRIALAPLFIVAFGISMSAKVALASTLVVFIVLASA--------RAGVRSTDA 227

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +   +S     S +Q F+ + +P + P +   + + +      V+ SE+I   D      
Sbjct: 228 EWLRLSTVLGASKFQVFYKVLLPVATPAIFSALRLGLIYSLLGVIGSELISARD------ 281

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268
           G+G  IA       + A+   ++ +  +    +QL   + R ++ W  
Sbjct: 282 GLGQLIATYSATFRMEAVYAILIMLAIIAVALNQLMGAIERRLLRWQP 329



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 98/294 (33%), Gaps = 23/294 (7%)

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
           ++ W    P S+ V+ L   L   R        +   +  +  +  +    V+  +    
Sbjct: 44  FAYWESSMPSSDTVQTLSPPLAGKRDRPSAKRSRPNRDTTIVRVAQVGIGIVLVWLWNFG 103

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIG 409
                   V   T                       TM  V++  ++AS + + VG+ +G
Sbjct: 104 TTHGWVAPVLAKTPSQSWNYFTGAAESGELWSNTKATMAAVLIAWVLASAVGVVVGVALG 163

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P     + P+ +   A P     PL +              S L++F     +L +  
Sbjct: 164 LLPRTERALTPYLEAANAMPRIALAPLFIVAFGISMSAKVALASTLVVFI----VLASAR 219

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG  +   ++  +++    + ++ +  ++LP   P   +        +    I SE+ S 
Sbjct: 220 AGVRSTDAEWLRLSTVLGASKFQVFYKVLLPVATPAIFSALRLGLIYSLLGVIGSELISA 279

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLY 580
                   GLG  IA  +       V   ++++    +ALN+ +      L  +
Sbjct: 280 RD------GLGQLIATYSATFRMEAVYAILIMLAIIAVALNQLMGAIERRLLRW 327


>gi|21241597|ref|NP_641179.1| permease [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106954|gb|AAM35715.1| permease [Xanthomonas axonopodis pv. citri str. 306]
          Length = 294

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 91/248 (36%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V    I   L+                   L    L +    +   +     + +L
Sbjct: 51  LAVLVAAWEIAARLVGDDLMLPGAGQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVL 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   LAA +R    VL  +  +   +P +  L   +++F             + +F 
Sbjct: 111 LAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFV 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +P  L    R++ L G +    L +P ++P ++  + +  +
Sbjct: 163 LVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWA 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + ++F+
Sbjct: 223 FAWRTLIAAELVFGATS--GQGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQ 280

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 281 AVERLTVR 288



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 85/271 (31%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L       R+  P    +      +    +I    V   + +  A Q+     +    
Sbjct: 28  PALVAATTPTRWQAPPWLRKTLVLAVLVAAWEIAARLVGDDLMLPGAGQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAVERLTVRR 289


>gi|289625091|ref|ZP_06458045.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289650243|ref|ZP_06481586.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485151|ref|ZP_07003246.1| Taurine transport system permease protein tauC [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160316|gb|EFI01342.1| Taurine transport system permease protein tauC [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330865648|gb|EGH00357.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330886103|gb|EGH20004.1| ABC transporter permease [Pseudomonas syringae pv. mori str.
           301020]
          Length = 288

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|254519752|ref|ZP_05131808.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226913501|gb|EEH98702.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 258

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 17/235 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           GI++  +P     I  +  D  ++  +   T    +   +I++  + + A +      + 
Sbjct: 32  GIEKYILPAPTDVIEVLIKDFKTMIPHILATLYEGMVGFLIAIALSIILAVIMDMVPLIK 91

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             L P+L I Q+IP +      +++F            L  I  +     + +  S+   
Sbjct: 92  RALYPVLVISQTIPTVALAPLFIIWFG--------FGALPKIIVVVIVCFFPIVISIVDG 143

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  + +DL    +    S    F +L +P+ M      M ++ +      V  E +    
Sbjct: 144 LEGVDKDLINHFKLMGASKLNVFLHLKLPYGMINFFSGMRIAATYSIMGAVIGEWLGGDK 203

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLFRPMIVWSNK 269
                 G+G Y+  A     L  +  +++ ++ +   IFL   L+ +    W+NK
Sbjct: 204 ------GLGVYMTRARSAYALDKMFASIVIIVVISMGIFLLVSLMEKLFTPWNNK 252



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V     +D   +I     T++  +V  +IA  + I + + +   P I   + P   +   
Sbjct: 44  VIEVLIKDFKTMIPHILATLYEGMVGFLIAIALSIILAVIMDMVPLIKRALYPVLVISQT 103

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL +    +  L       ++++    + I+ +++ G      D         
Sbjct: 104 IPTVALAPLFIIWFGFGAL----PKIIVVVIVCFFPIVISIVDGLEGVDKDLINHFKLMG 159

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +    + ++ LP     + +G   A   +   +++ E            GLG Y+  + 
Sbjct: 160 ASKLNVFLHLKLPYGMINFFSGMRIAATYSIMGAVIGEWLGGDK------GLGVYMTRAR 213

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
              +  ++   ++I+    + +
Sbjct: 214 SAYALDKMFASIVIIVVISMGI 235


>gi|49083186|gb|AAT50967.1| PA2307 [synthetic construct]
          Length = 289

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 99/256 (38%), Gaps = 15/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQY 64
            +S+R++   +     +L +  +   L    +               +   L    LP  
Sbjct: 28  PLSQRLWQQSWLRKGLILALPALAWELAARVQGNDLLLPGFLQTARALGEGLASGELPAK 87

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  + L +    ++ ++  FV  +LA  ++    +L  +  +   +P +  L   +++F 
Sbjct: 88  AGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFG 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + + IF +  S +W +  + Y     +   L    R++ L G +    + 
Sbjct: 148 LG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLIL 199

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     +   
Sbjct: 200 VPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAG 257

Query: 245 MLTMLGVIFLYDQLLF 260
           +  ++ +  L + L+F
Sbjct: 258 LAVVVLIGLLVENLVF 273



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|297172826|gb|ADI23789.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured gamma proteobacterium
           HF4000_47G05]
          Length = 174

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 15/171 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L A +    M+L PILD MQ++P   +L   +++F         G  ++A+ AI    
Sbjct: 2   GVLTAINDTFEMLLRPILDAMQTLPAFVYLIPVLMFFG--------GNVVSAVIAIMIYS 53

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +       +  +  +  E S SF  +  Q    + +P ++P ++  +  S+      
Sbjct: 54  LPPIIRLTNLGIREVSGEAIEASHSFGATFRQTLAKVRLPLALPSIMMGVNQSVMMVLAM 113

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++ + MI  G       G+G  + L +   +    L A L ++ +  + D+
Sbjct: 114 LIITPMIGGG-------GLGREVFLGLNTANTGIALQAGLAIVFLAIILDR 157



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 11/168 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+           ++P    +   PA V+   V+           +   + ++  +   
Sbjct: 1   MGVLTAINDTFEMLLRPILDAMQTLPAFVYLIPVLMFFG----GNVVSAVIAIMIYSLPP 56

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+     G      +  E + SF  T  +    + LP   P  + G   +        I+
Sbjct: 57  IIRLTNLGIREVSGEAIEASHSFGATFRQTLAKVRLPLALPSIMMGVNQSVMMVLAMLII 116

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + +   G       GLG  +       +    +   L +    + L+R
Sbjct: 117 TPMIGGG-------GLGREVFLGLNTANTGIALQAGLAIVFLAIILDR 157


>gi|218260367|ref|ZP_03475723.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224558|gb|EEC97208.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii
           DSM 18315]
          Length = 464

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 18/206 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R  + + I+ +  + V         +    +P   ++ A P   F  L +  +  
Sbjct: 59  MATVLRGTIGMSISLMAAVGVSFLFYKCEWMYELFRPLLAIMRAIPVISFILLALIFL-- 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                   + L++ F T + +L  N+  G  +   +   +A  F I  W     +  P +
Sbjct: 117 ----NAESIPLIIAFLTMFPLLTENLTKGIRSRRKELSIMARQFKIGRWNRLTQVTYPQL 172

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+  +G  +A G  W A I+ EV +       + G+G  + ++    + PE++   +I 
Sbjct: 173 KPFLYSGLASALGFGWRAIIMGEVLA-----QCSPGIGGEMKQAQVFIAVPELIAWTVIA 227

Query: 563 CCFVLALNRFL-WHPLYLYGTRCLRL 587
                  +R + W        R   +
Sbjct: 228 ILISYLFDRGISW-----LAKRRFSI 248



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 94/230 (40%), Gaps = 14/230 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
              ++ +L+           ++  +       S  Q    T LR    M ISL+     +
Sbjct: 21  AWQLLAMLVRLPDLVPSVPRLLSTLAALFASGSFYQSVMATVLRGTIGMSISLMAAVGVS 80

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  K   +  +  P+L IM++IP++ F+   +++         + AE   +   F +  
Sbjct: 81  FLFYKCEWMYELFRPLLAIMRAIPVISFILLALIF---------LNAESIPLIIAFLTMF 131

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +T ++ + + +  ++L  ++R F++  W +   +  P   P L   +  ++  GW  +
Sbjct: 132 PLLTENLTKGIRSRRKELSIMARQFKIGRWNRLTQVTYPQLKPFLYSGLASALGFGWRAI 191

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +  E++         PGIG  +  A     +  ++   +  + + +L+D+
Sbjct: 192 IMGEVLA-----QCSPGIGGEMKQAQVFIAVPELIAWTVIAILISYLFDR 236


>gi|116254839|ref|YP_770675.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259487|emb|CAK10625.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 276

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 19/251 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +   R +       P    +L     + + L I    +V    +G A   I   +    +
Sbjct: 2   RAGSRLVKPAGSTGPRARRRLGPGPAIPFGLQIGPVLLVLTWVVGSALGWIDPRILSAPW 61

Query: 374 QDVLYVIWLG---------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             V   + L            +  R ++ + I  +I   + +  G      + I    Q+
Sbjct: 62  TVVEAFVRLIEQGRLQDNFVTSATRALLGLSIGLLIGTILAVIAGLSRIGEALIDGPVQI 121

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
             A P     PL++             ++L +I      I  +      +  + + E+A 
Sbjct: 122 KRAIPTLALIPLLILWFGIGESMKVTTIALAVIV----PIYIHTHNALRSIDSRYVELAE 177

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +  ++   +   ++LPG  P ++ G   A    W + +V E  +       T+GLG  I 
Sbjct: 178 TLRMSQKDFILQVVLPGALPGFLLGLRFAVTLCWVSLVVVEQIN------ATSGLGYMID 231

Query: 545 ESTEKGSFPEV 555
            +   G    +
Sbjct: 232 LARNYGQTDVI 242



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 20/248 (8%)

Query: 25  FVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +LV+  +     G  +    + P  +V+     ++   L      +  R L  + I LL
Sbjct: 37  VLLVLTWVVGSALGWIDPRILSAPWTVVEAFVRLIEQGRLQDNFVTSATRALLGLSIGLL 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A +A  SR    ++   + I ++IP L  +   +++F      KV    LA I  
Sbjct: 97  IGTILAVIAGLSRIGEALIDGPVQIKRAIPTLALIPLLILWFGIGESMKVTTIALAVIVP 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I+           + +L +I     E++ + R+S       + +P ++PG +  +  +++
Sbjct: 157 IY--------IHTHNALRSIDSRYVELAETLRMSQKDFILQVVLPGALPGFLLGLRFAVT 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258
             W  +V  E I          G+G  I LA        IL  ++  + +  + D   +L
Sbjct: 209 LCWVSLVVVEQI------NATSGLGYMIDLARNYGQTDVILVGLVVYVLLGLVSDGLVRL 262

Query: 259 LFRPMIVW 266
           L R  + W
Sbjct: 263 LERRTLSW 270


>gi|71734851|ref|YP_272625.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555404|gb|AAZ34615.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|330986764|gb|EGH84867.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 288

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|218961821|ref|YP_001741596.1| Hydroxymethylpyrimidine transport system permease protein
           [Candidatus Cloacamonas acidaminovorans]
 gi|167730478|emb|CAO81390.1| Hydroxymethylpyrimidine transport system permease protein
           [Candidatus Cloacamonas acidaminovorans]
          Length = 259

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +  +   T +  +S ++IS++   + A     SR +  ++ P L I Q++PI+    
Sbjct: 48  PGLIWHHLKPTLIEAISGLLISIVLGSITAIAMNLSRLIKQIIYPYLIISQTVPIIAVAP 107

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F             A IFA+     + +   +Y    ++  D   +  S   + +
Sbjct: 108 LLIIWFGYGI--------SAKIFAVVLMCFFPIALGLYDGFRSVSIDQIRLLTSMGATPY 159

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + F  L +P ++P     + +S +      V  E +          G+G Y+  A     
Sbjct: 160 KIFRLLKIPSALPNFFTGLKLSATYSVMGAVIGEWLGG------TSGLGIYMTRATNVHQ 213

Query: 238 LLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
              I   ++  + V         LL R ++ W
Sbjct: 214 TAHIFAVIIVFVAVSLALFGIVALLDRILLKW 245



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +  ++I+ ++     I +     I   I P+  +    P     PL++    Y  
Sbjct: 58  TLIEAISGLLISIVLGSITAIAMNLSRLIKQIIYPYLIISQTVPIIAVAPLLIIWFGYG- 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                     ++    + I   +  G  +   D   + +S   T ++ +R + +P   P 
Sbjct: 117 ---ISAKIFAVVLMCFFPIALGLYDGFRSVSIDQIRLLTSMGATPYKIFRLLKIPSALPN 173

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + TG   +   +   +++ E          T+GLG Y+  +T       +   +++    
Sbjct: 174 FFTGLKLSATYSVMGAVIGEWLGG------TSGLGIYMTRATNVHQTAHIFAVIIVFVAV 227

Query: 566 VLAL 569
            LAL
Sbjct: 228 SLAL 231


>gi|312143140|ref|YP_003994586.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
 gi|311903791|gb|ADQ14232.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
          Length = 250

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 76/194 (39%), Gaps = 9/194 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+ R ++   +A  + I + + +    +     +P   ++ A P  V+  L +     
Sbjct: 56  MITLRRTLIAYSLAVAVGIILALLMHRFEYFKRSFRPLITMIQATPPVVWIALAIIWFGV 115

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    L+   +   I  N+  G      +  E+A ++     R  + I  P + 
Sbjct: 116 AE---DLTPIFLIFIVSMPVIFVNLFQGIDDLNTELVEMAEAYSTPRLRIIKEIYFPALL 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V+    A   AW +S+ +E          ++G+G  ++ +    +  ++    +I+ 
Sbjct: 173 PALVSALSIAFAFAWKSSVFAEFIG------SSSGIGYQLSRANSMLATDKLFAWTIILL 226

Query: 564 CFVLALNRFLWHPL 577
            F++ +  +L   L
Sbjct: 227 LFMIFVEYYLLEKL 240



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 84/195 (43%), Gaps = 14/195 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R L A  +++    + A L  +         P++ ++Q+ P + ++   +++F    
Sbjct: 58  TLRRTLIAYSLAVAVGIILALLMHRFEYFKRSFRPLITMIQATPPVVWIALAIIWFG--- 114

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +  +L  IF IF   +  +  +++Q + ++  +L E++ ++     +    +  P 
Sbjct: 115 ----VAEDLTPIFLIFIVSMPVIFVNLFQGIDDLNTELVEMAEAYSTPRLRIIKEIYFPA 170

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAML 246
            +P LV  + ++ +  W   V +E I          GIG  ++ A        +  + ++
Sbjct: 171 LLPALVSALSIAFAFAWKSSVFAEFIGSSS------GIGYQLSRANSMLATDKLFAWTII 224

Query: 247 TMLGVIFLYDQLLFR 261
            +L +IF+   LL +
Sbjct: 225 LLLFMIFVEYYLLEK 239


>gi|294784649|ref|ZP_06749938.1| ABC transporter, permease protein [Fusobacterium sp. 3_1_27]
 gi|294487865|gb|EFG35224.1| ABC transporter, permease protein [Fusobacterium sp. 3_1_27]
          Length = 257

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  RD
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDRD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 83/233 (35%), Gaps = 10/233 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W        +          + +   +D    ++   ITM   ++ + +  +I  
Sbjct: 16  ILIAIWQVCGNLGLLPKFIFPTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIAS 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     I+  + P        P     P++V  + Y          +L++  T +
Sbjct: 76  LLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWLGY----DMTPKIVLIVINTTF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D  ++    + + W+   ++ +P    Y+  G   +   A+ +++
Sbjct: 132 PIVISILDGFRHCDRDAIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           VSE            GLG ++  + +   +  +   ++++    L     +  
Sbjct: 192 VSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238


>gi|226950600|ref|YP_002805691.1| ABC transporter, permease protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226840991|gb|ACO83657.1| ABC transporter, permease protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 267

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVILNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + I+ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVILNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDMVMFSIIILAILAYLM 250


>gi|310823024|ref|YP_003955382.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|309396096|gb|ADO73555.1| ABC transporter, permease [Stigmatella aurantiaca DW4/3-1]
          Length = 251

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   +  +I++ I+ + V   +   P ++  + P        P     PL +    Y 
Sbjct: 57  ITLAETLAGLIVSVILGVAVAAAMHLSPVVNRLVYPVIVASQTIPVIALSPLFLFWFGYS 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     +++  T + +  N   G  +   +      +     WR  R +  P   P
Sbjct: 117 FAQK----VAVVVLITFFPVAVNTADGLRSADRELLAWMRASGADRWRILRMVEAPNAMP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           ++ TG   A   +   +++ E           +GLG +   ++     PE+   V+++  
Sbjct: 173 HFFTGLKQAATISVIGAVIGEWLGG------QSGLGIFGRRASSSLKTPELFASVILLAV 226

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
               L       L  +  R  
Sbjct: 227 MGGLL-----FSLVSWAERRF 242



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 83/248 (33%), Gaps = 19/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              F+ V  ++                +     T     L ++   T    L+ +++S++
Sbjct: 12  FAGFIGVWEVLCRWAGMPSFILPAPSQIATAFWTWREALLLEHLPITLAETLAGLIVSVI 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A     S  +  ++ P++   Q+IP++      + +F   +  K        +  
Sbjct: 72  LGVAVAAAMHLSPVVNRLVYPVIVASQTIPVIALSPLFLFWFGYSFAQK--------VAV 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  +    L +  R+L    R+     W+    +  P +MP     +  +  
Sbjct: 124 VVLITFFPVAVNTADGLRSADRELLAWMRASGADRWRILRMVEAPNAMPHFFTGLKQA-- 181

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                 ++    V+G+ +    G+G +   A        +  +++ +  +  L   L   
Sbjct: 182 ----ATISVIGAVIGEWLGGQSGLGIFGRRASSSLKTPELFASVILLAVMGGLLFSL--- 234

Query: 262 PMIVWSNK 269
             + W+ +
Sbjct: 235 --VSWAER 240


>gi|163748251|ref|ZP_02155544.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161378477|gb|EDQ02953.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 292

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 70/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   V+V  +IA  I + +G+ +G        + P+   +   P   F PL VS + + 
Sbjct: 93  VTTQEVLVGFVIAVSIGVSLGVLVGETTIGERAVMPYIVAIDTMPKLAFAPLFVSWLGFG 152

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L  F + + I+    AG  A   + + +  S   +  +    + +P   P
Sbjct: 153 IGSK----VALAAFISVFPIVVGTAAGLHAADANSRMLFQSIGASRMQTLIKLKIPSGLP 208

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + TG   A       ++  E+   G       G G  I  +  + S   V   ++ +  
Sbjct: 209 QFFTGLKIASISVVGGAVAGELLGGGQ------GFGELIRAAAAQLSTARVFSLIIYLSL 262

Query: 565 FVLALNRFL 573
             + +  F+
Sbjct: 263 LGVLMFGFV 271



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 14/188 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           TT  +L   VI++        L  ++      ++P +  + ++P L F    V +     
Sbjct: 94  TTQEVLVGFVIAVSIGVSLGVLVGETTIGERAVMPYIVAIDTMPKLAFAPLFVSWLGFGI 153

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A   ++F         +       L     +   + +S   S  Q    L +P 
Sbjct: 154 GSKVALAAFISVF--------PIVVGTAAGLHAADANSRMLFQSIGASRMQTLIKLKIPS 205

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P     + ++        VA E++  G       G G  I  A  +     +   ++ 
Sbjct: 206 GLPQFFTGLKIASISVVGGAVAGELLGGGQ------GFGELIRAAAAQLSTARVFSLIIY 259

Query: 248 MLGVIFLY 255
           +  +  L 
Sbjct: 260 LSLLGVLM 267


>gi|153938149|ref|YP_001392523.1| ABC transporter, permease protein [Clostridium botulinum F str.
           Langeland]
 gi|168179179|ref|ZP_02613843.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|152934045|gb|ABS39543.1| ABC transporter, permease protein [Clostridium botulinum F str.
           Langeland]
 gi|182669973|gb|EDT81949.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916]
 gi|295320509|gb|ADG00887.1| ABC transporter, permease protein [Clostridium botulinum F str.
           230613]
          Length = 267

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDMVMFSIIILAILAYLM 250


>gi|293402329|ref|ZP_06646466.1| osmoprotectant ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304176|gb|EFE45428.1| osmoprotectant ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 517

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 15/178 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                     + +RL  +++ ++  + +IP +  L F + +              +AI A
Sbjct: 37  IGVSLGIFIHEKKRLSPIVLGLVSFLYTIPSISMLGFLIPFSGIGN--------KSAIIA 88

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +  + +  L N+  D+ E +R    +  Q  + + +P +MP ++        
Sbjct: 89  LTIYALLPIIRATFTGLENVDADIIEAARGMGSTRKQILFQIKLPLAMPVMLSGFK---- 144

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V +  +    + I   G+G  I   I   ++   +   L +  + FL D L+
Sbjct: 145 ---NMTVMTIALAGIASFIGAGGLGVAIYRGITTNNMTMTIAGSLAVALLAFLSDILI 199



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 58/176 (32%), Gaps = 11/176 (6%)

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           ++I + +GI+I  +  +S  +      L   P+      ++      + +  + L++  +
Sbjct: 35  TMIGVSLGIFIHEKKRLSPIVLGLVSFLYTIPSISMLGFLIPFSGIGNKSAIIALTIYAL 94

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I+     G      D  E A     T  +    I LP   P  ++G        
Sbjct: 95  L----PIIRATFTGLENVDADIIEAARGMGSTRKQILFQIKLPLAMPVMLSGFK------ 144

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            N ++++   +     +   GLG  I       +    + G L +       +  +
Sbjct: 145 -NMTVMTIALAGIASFIGAGGLGVAIYRGITTNNMTMTIAGSLAVALLAFLSDILI 199


>gi|15805538|ref|NP_294234.1| ABC transporter ATP-binding protein [Deinococcus radiodurans R1]
 gi|6458201|gb|AAF10090.1|AE001910_3 ABC transporter, ATP-binding protein [Deinococcus radiodurans R1]
          Length = 498

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 10/177 (5%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           I     +   + PF     + P  V  PL+VS + +     +L   L+      + +L +
Sbjct: 329 IAKSRALERFLSPFIVASQSTPIVVLAPLLVSWLGFG----SLPAVLVSALSALYPVLVS 384

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G     + + E+  S   T W+    + LPG  P  + G   A   A   ++V    
Sbjct: 385 TLIGVREVDHAYHELFHSLRATPWQRLTRLELPGALPVMLGGLRLAASLALIGAVV---- 440

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            W        GLG  + E+            + ++  F + L   +   L  +  R 
Sbjct: 441 -WEFTDPNQKGLGFRVQEAGIYQDKAGQFAAIALLIVFGVLLYGAV-TALERWAARR 495



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            AKSR L   L P +   QS PI+      V +             L A+     S ++ 
Sbjct: 329 IAKSRALERFLSPFIVASQSTPIVVLAPLLVSWLG--------FGSLPAVLVSALSALYP 380

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  S    +  +     E+  S R + WQ+   L +P ++P ++  + ++ S      V 
Sbjct: 381 VLVSTLIGVREVDHAYHELFHSLRATPWQRLTRLELPGALPVMLGGLRLAASLALIGAVV 440

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            E      T     G+G  +  A   QD      A+  ++    L    +   +  W+ +
Sbjct: 441 WEF-----TDPNQKGLGFRVQEAGIYQDKAGQFAAIALLIVFGVLLYGAV-TALERWAAR 494

Query: 270 FR 271
            R
Sbjct: 495 RR 496


>gi|326693856|ref|ZP_08230861.1| glycine betaine/carnitine/choline ABC transporter, substratebinding
           and permease protein [Leuconostoc argentinum KCTC 3773]
          Length = 504

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A  A   RR    L+ +  + Q++P L  L   +       P        AA+ A+  
Sbjct: 36  PLAIWAENHRRYAEWLLQLTGLFQTLPSLAVLGLLIPVVGIGAP--------AALIALVI 87

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  + Y  L  + +D+ +  R+  LS  Q    + +P + P ++  +  ++    
Sbjct: 88  YALLPIFQNTYLGLTEVDQDVLDGGRALGLSRRQVLRRIQIPLAQPSIMAGLRTAIVLII 147

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                + +I  G       G+G +I L I   +   IL      + +  +
Sbjct: 148 GTATLAALIGAG-------GLGDFILLGINRNNTDLILIGAFASVALALI 190



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 17/171 (9%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+ IW       +  +     L    P+     L++  V        + L +  +     
Sbjct: 36  PLAIWAENHRRYAEWLLQLTGLFQTLPSLAVLGLLIPVVGIGAPAALIALVIYALL---- 91

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  N   G +    D  +   +  ++  +  R I +P   P  + G  TA       + 
Sbjct: 92  PIFQNTYLGLTEVDQDVLDGGRALGLSRRQVLRRIQIPLAQPSIMAGLRTAIVLIIGTAT 151

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG------VLIMCCFVL 567
           ++ +   G       GLG +I     + +   +++G      + ++  F +
Sbjct: 152 LAALIGAG-------GLGDFILLGINRNNTDLILIGAFASVALALIGSFGV 195


>gi|170739103|ref|YP_001767758.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168193377|gb|ACA15324.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 273

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 14/230 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++  L            ++  +   +      ++   T    L    + +   F   T+
Sbjct: 30  GVVWALAIPAYILPPASAVLTALYRGIASTLYLKHIWVTLYETLLGFALGVTLAFALGTV 89

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A +R +   L P + + QS+P +      +V+F      KV+ A L A F         
Sbjct: 90  VALNRTVEYFLYPFIVMFQSMPKVALAPLIIVWFGLGLTSKVVNAALVAFF--------P 141

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    L +   D   + RS   +  Q FW L +P ++P +   + ++M       + 
Sbjct: 142 LMVNTIVGLRSAEEDRLNLMRSLAATRTQIFWMLQLPNALPYIFAGLEIAMIFALIGAIV 201

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +E +          G+G  I       D+      ++ +  +  + + ++
Sbjct: 202 AEFVG------AQAGLGMLIQSMNFSLDVAGQFSVLIILSLMGLVLNSVI 245



 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 13/225 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W   +    +  A   +  +         L  IW   +T++  ++   +   +   +G
Sbjct: 31  VVWALAIPAYILPPASAVLTALYRGIASTLYLKHIW---VTLYETLLGFALGVTLAFALG 87

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             +     +   + PF  +  + P     PL++        +  +  +L+      + ++
Sbjct: 88  TVVALNRTVEYFLYPFIVMFQSMPKVALAPLIIVWFGLGLTSKVVNAALV----AFFPLM 143

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G  +   D   +  S   T  + +  + LP   PY   G   A   A   +IV+E
Sbjct: 144 VNTIVGLRSAEEDRLNLMRSLAATRTQIFWMLQLPNALPYIFAGLEIAMIFALIGAIVAE 203

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                       GLG  I               ++I+    L LN
Sbjct: 204 FVG------AQAGLGMLIQSMNFSLDVAGQFSVLIILSLMGLVLN 242


>gi|258651891|ref|YP_003201047.1| binding-protein-dependent transporters inner membrane component
           [Nakamurella multipartita DSM 44233]
 gi|258555116|gb|ACV78058.1| binding-protein-dependent transport systems inner membrane
           component [Nakamurella multipartita DSM 44233]
          Length = 288

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +LV   + ++L   +   +P  +  +    L+   L ++   T    L    +SL 
Sbjct: 42  IVALLLVGWQLAVVLTDARPQILPSPLRVVQQGWLNRDDLTRHGLATLGVTLVGFTVSLA 101

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            ++  A        L   LVP+L   Q++PI+      +++F            L  +  
Sbjct: 102 VSWAVAITVDFVPWLRRALVPLLVGSQTLPIIAIAPLMIIWFGFGL--------LPKVLV 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +   + +   +  R+   +  S   S  Q+F YL +P +MP     + + ++
Sbjct: 154 IILTTFFPVAIGLIEGFSSADRETGRLLASMGASRGQQFRYLRLPGAMPRFFTALRIGIT 213

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQL 258
                 + +E +          G+G Y+++         +L A+     +   +F    L
Sbjct: 214 YAVVAAIFAEYVG------ATSGLGIYMSMQKNSFRTDLVLAAVGVTAIISITLFALTFL 267

Query: 259 LFRPMIVWSNKFRLERTTGI 278
           L R +  W    R  R TG 
Sbjct: 268 LERLVCPWQRASRPHRETGG 287



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 84/246 (34%), Gaps = 23/246 (9%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-------------VNHFTYQDVLYVIWLG 383
             R   +L       +    + + WQ    +             V    + +   +   G
Sbjct: 26  RSRGRRLLATVGPAALIVALLLVGWQLAVVLTDARPQILPSPLRVVQQGWLNRDDLTRHG 85

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+   +V   ++  +   V I + F P +   + P        P     PL++    +
Sbjct: 86  LATLGVTLVGFTVSLAVSWAVAITVDFVPWLRRALVPLLVGSQTLPIIAIAPLMIIWFGF 145

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       L++I  T + +   +I G S+   +   + +S   +  + +RY+ LPG  
Sbjct: 146 GLL----PKVLVIILTTFFPVAIGLIEGFSSADRETGRLLASMGASRGQQFRYLRLPGAM 201

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P + T        A  A+I +E          T+GLG Y++          V+  V +  
Sbjct: 202 PRFFTALRIGITYAVVAAIFAEYVG------ATSGLGIYMSMQKNSFRTDLVLAAVGVTA 255

Query: 564 CFVLAL 569
              + L
Sbjct: 256 IISITL 261


>gi|157146325|ref|YP_001453644.1| hypothetical protein CKO_02083 [Citrobacter koseri ATCC BAA-895]
 gi|157083530|gb|ABV13208.1| hypothetical protein CKO_02083 [Citrobacter koseri ATCC BAA-895]
          Length = 288

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 2/136 (1%)

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           N  L  ++I    W I  N  +G S+ P   +    ++ ++G R+   I++P   P  ++
Sbjct: 150 NASLIFVLIHSVMWPIALNTWSGFSSVPETLRMAGRNYGLSGPRYVITILIPASLPAILS 209

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G       AW   I +E+           GLG YI ++  +     V  G+L +    L 
Sbjct: 210 GLKIGWAFAWRTLIAAELVFGASSGEG--GLGWYIFQNRNELFTDRVFAGLLTVIAIGLL 267

Query: 569 LNRFLWHPLYLYGTRC 584
           +   ++  L     + 
Sbjct: 268 VEGVVFASLEKITVKR 283



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 100/258 (38%), Gaps = 15/258 (5%)

Query: 8   PPFISRRIFPNIF-----DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           P  +++R++   +      +   + +  I   +             +      +    LP
Sbjct: 26  PLPLNQRLWNQTWLRKCLIVALVLALWEIAARIQQNDLMLPGVLQTLQAFSEDMRNGELP 85

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +    +   +L   +       + + LA  ++    +L  +  ++  +P +  L   +++
Sbjct: 86  EKIVNSLSTLLKGYLAGSALALIASALAVTTQFGRDLLSTLTAMLNPLPAIALLPLALLW 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + IF +  S +W +  + +    ++P  L    R++ LSG +    
Sbjct: 146 FGLGN--------ASLIFVLIHSVMWPIALNTWSGFSSVPETLRMAGRNYGLSGPRYVIT 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+P ++  + +  +  W  ++A+E++    +     G+G YI     E     + 
Sbjct: 198 ILIPASLPAILSGLKIGWAFAWRTLIAAELVFGASS--GEGGLGWYIFQNRNELFTDRVF 255

Query: 243 YAMLTMLGVIFLYDQLLF 260
             +LT++ +  L + ++F
Sbjct: 256 AGLLTVIAIGLLVEGVVF 273


>gi|219849602|ref|YP_002464035.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
 gi|219543861|gb|ACL25599.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
          Length = 267

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L    + I  +       P  +       L    L Q+ + T    L    ++LL
Sbjct: 32  LALLTLWQAGVTISGYPAFILPSPALVATRFGQALSSGLLWQHTAATLSAALGGFALALL 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   + A  R L   L P+L   Q+IP++      +++F      K++ A L     
Sbjct: 92  VALVLGYILAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKILVAALITFL- 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +   ++ +IPR+L E++     +  Q   Y+ VP ++P L   +   ++
Sbjct: 151 -------PILINTIVAIRSIPRELIEMAHISGANRRQLLRYVEVPLALPVLFGGVRTGLA 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY---AMLTMLGVIFLYDQL 258
                 V  E +          G+G+ I +A    D   I      +  +   +++   L
Sbjct: 204 LATTGAVVGEFVAGRT------GLGALINIARGLFDTPLIFVALTTLALITLTLYVLAGL 257

Query: 259 LFRPMIVW 266
           L R ++ W
Sbjct: 258 LERLLVRW 265



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 73/228 (32%), Gaps = 11/228 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFR 389
           +  L     +  +L ++   V           S   +   F       ++W     T+  
Sbjct: 22  WSALGLPVTLLALLTLWQAGVTISGYPAFILPSPALVATRFGQALSSGLLWQHTAATLSA 81

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            +    +A ++ + +G  +     +   + P      A P     PL++        +  
Sbjct: 82  ALGGFALALLVALVLGYILAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSK- 140

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               L+    T   IL N I    + P +  E+A        +  RY+ +P   P    G
Sbjct: 141 ---ILVAALITFLPILINTIVAIRSIPRELIEMAHISGANRRQLLRYVEVPLALPVLFGG 197

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             T    A   ++V E  +        TGLGA I  +      P + +
Sbjct: 198 VRTGLALATTGAVVGEFVAGR------TGLGALINIARGLFDTPLIFV 239


>gi|288917427|ref|ZP_06411793.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288351130|gb|EFC85341.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 286

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 72/213 (33%), Gaps = 17/213 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T   +L+A V++     V       + R+  VL P LD   ++P +     
Sbjct: 84  GELWSNTRATLKAVLAAWVLAGAAGTVAGVALGLAPRVERVLTPYLDAANAMPRIALAPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V        KV  A     F   +             + +   +   +S        Q
Sbjct: 144 FIVALGINTSAKVALASTLVFFIALSGA--------RAGVRSTDAEWLRLSTVLGAGKRQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P +   + + +      VV SE+I   D      G+G  IA       +
Sbjct: 196 LFVKVLIPVATPAIFAALRLGLIYSLLGVVGSELISARD------GLGQLIAYYSSTFRM 249

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
            A+   +L +  V    +QL+    R ++ W  
Sbjct: 250 EAVYGILLLLGLVAVTLNQLMGLAERRLLRWQP 282



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 18/224 (8%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q+  Y+ +     ++         T+  V+   ++A       G+ +G  P +   + P+
Sbjct: 72  QTASYLFDAAGSGELWSNTR---ATLKAVLAAWVLAGAAGTVAGVALGLAPRVERVLTPY 128

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
                A P     PL +  +           S L+ F      L    AG  +   ++  
Sbjct: 129 LDAANAMPRIALAPLFIVALGINTSAKVALASTLVFFIA----LSGARAGVRSTDAEWLR 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +++       + +  +++P   P            +    + SE+ S         GLG 
Sbjct: 185 LSTVLGAGKRQLFVKVLIPVATPAIFAALRLGLIYSLLGVVGSELISARD------GLGQ 238

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            IA  +       V   +L++    + LN+ +         R L
Sbjct: 239 LIAYYSSTFRMEAVYGILLLLGLVAVTLNQLM-----GLAERRL 277


>gi|251780296|ref|ZP_04823216.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084611|gb|EES50501.1| glycine betaine/carnitine/choline transport system permease protein
           opucb [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 523

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 19/199 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T+L +     ++++         +  +++   ++ I +I+Q+IP +  L F +
Sbjct: 19  LIEHIKLTSLSV----GLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFAI 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +               AI  +    +  +  +    + +I     E +R   L+ +Q  
Sbjct: 75  PFLGIG--------TTPAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQIL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + +S       V A  ++ +    I   G+G  +   I+  +   
Sbjct: 127 VKVQLPLALPVIMSGVRIS------AVTAVGLMTMAAF-IGGGGLGYLVFSGIRTVNNYQ 179

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL   +    +    D L 
Sbjct: 180 ILAGAIPACILALAVDFLF 198



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +  L    +    + + +A II +P+GI I +   ++  +   A ++ A P+       
Sbjct: 14  QIFMLLIEHIKLTSLSVGLAIIIAMPLGICISYIKQMNKPVIAIANIIQAIPSMALLGFA 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +            ++++  +   I+ N   G  +      E A    +T ++    +
Sbjct: 74  IPFLGIGTT----PAIVMVVLYSLLPIIKNTNTGIKSINPQTLEAARGIGLTKFQILVKV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G   +   A     ++     G       GLG  +       +  +++ 
Sbjct: 130 QLPLALPVIMSGVRISAVTAVGLMTMAAFIGGG-------GLGYLVFSGIRTVNNYQILA 182

Query: 558 GVLIMCCFVLALNRFL 573
           G +  C   LA++   
Sbjct: 183 GAIPACILALAVDFLF 198


>gi|170755136|ref|YP_001782811.1| ABC transporter, permease protein [Clostridium botulinum B1 str.
           Okra]
 gi|169120348|gb|ACA44184.1| ABC transporter, permease protein [Clostridium botulinum B1 str.
           Okra]
          Length = 267

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDMVMFSIIILAILAYLM 250


>gi|23099773|ref|NP_693239.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22778003|dbj|BAC14274.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 266

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++       SL  +   T L  +   +I  +   + ATL   SRR   V+ P
Sbjct: 51  SSPSRVFHLIIQRFANGSLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDP 110

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L IM ++P +      +V     Y        L+ I   F   V   T  +Y +   + 
Sbjct: 111 YLVIMNAMPKVALGPILIVALGPGY--------LSIIAMGFIISVIVTTLVVYSAFNEVD 162

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + ++V  SF  + WQ F     P ++P ++  + +++   W  V+  E +V        
Sbjct: 163 PNYQKVMLSFGATRWQCFKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLV------SK 216

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  I    +  D   ++ +++ +  +  +  +++ +
Sbjct: 217 QGLGYLIIYGFQVFDFTLVMSSLVIIAVLATIMYKVVEK 255



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   ++  +I +I  I +   +      +  + P+  ++ A P     P+
Sbjct: 67  GSLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPI 126

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +   +L+    +  +    +       V +  +    ++++V  SF  T W+ ++ 
Sbjct: 127 LIVALGPGYLS----IIAMGFIISVIVTTLVVYSAFNEVDPNYQKVMLSFGATRWQCFKE 182

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            I P   P  ++      G +W   IV E        +   GLG  I    +   F  V+
Sbjct: 183 AIFPSALPAIISTLKVNVGLSWVGVIVGEYL------VSKQGLGYLIIYGFQVFDFTLVM 236

Query: 557 LGVLIMCCFVLALNRFL 573
             ++I+      + + +
Sbjct: 237 SSLVIIAVLATIMYKVV 253


>gi|148381120|ref|YP_001255661.1| ABC transporter permease [Clostridium botulinum A str. ATCC 3502]
 gi|153934072|ref|YP_001385495.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936956|ref|YP_001388901.1| ABC transporter, permease protein [Clostridium botulinum A str.
           Hall]
 gi|148290604|emb|CAL84733.1| putative ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|152930116|gb|ABS35616.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932870|gb|ABS38369.1| ABC transporter, permease protein [Clostridium botulinum A str.
           Hall]
          Length = 267

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDMVMFSIIILAILAYLM 250


>gi|150016959|ref|YP_001309213.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149903424|gb|ABR34257.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 260

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             IT+   ++ +I + II I   + I    ++S  + P        P     P++V    
Sbjct: 56  SLITLGEALLGLIASVIIGISCALSIYLWRNVSKTLYPIIIFSQTIPTIALSPIMVMWFG 115

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y           ++I    + I+ + + G ++   D ++V  +     ++ +  + +  +
Sbjct: 116 YT----IWSKVAVVILFCFFPIVISTLDGLNSVDRDLEDVLKALGGNRFQIFFKLHMNSV 171

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P +++    A   + + + + E            GLG YI  +        V  GVL++
Sbjct: 172 LPNFLSSFKIAATYSISGATIGEWLGAEK------GLGIYIKRAAGMLQADSVFAGVLVL 225

Query: 563 CCFVLAL 569
               L L
Sbjct: 226 SFLGLIL 232



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 22/197 (11%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           +++  T    L  ++ S++     A      R +   L PI+   Q+IP +      V++
Sbjct: 54  KHSLITLGEALLGLIASVIIGISCALSIYLWRNVSKTLYPIIIFSQTIPTIALSPIMVMW 113

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F             + +  +     + +  S    L ++ RDLE+V ++   + +Q F+ 
Sbjct: 114 FGYTI--------WSKVAVVILFCFFPIVISTLDGLNSVDRDLEDVLKALGGNRFQIFFK 165

Query: 183 LGVPFSMPGLVWNMMM----SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           L +   +P  + +  +    S+SG            +G+ +    G+G YI  A      
Sbjct: 166 LHMNSVLPNFLSSFKIAATYSISGA----------TIGEWLGAEKGLGIYIKRAAGMLQA 215

Query: 239 LAILYAMLTMLGVIFLY 255
            ++   +L +  +  + 
Sbjct: 216 DSVFAGVLVLSFLGLIL 232


>gi|170760937|ref|YP_001788492.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407926|gb|ACA56337.1| ABC transporter, permease protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 267

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDIVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 78.0 bits (191), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + WQ   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDIVMFSIIILAILAYLM 250


>gi|237741131|ref|ZP_04571612.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 4_1_13]
 gi|229430663|gb|EEO40875.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 4_1_13]
          Length = 257

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFETINRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  RD
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDRD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 83/233 (35%), Gaps = 10/233 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W        +          + +   +D    ++   ITM   ++ + +  +I  
Sbjct: 16  ILIAIWQVCGNLGLLPKFIFPTPLEIANAFVRDKALFLFHFKITMLEALIGLSLGILIAS 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     I+  + P        P     P++V  + Y          +L++  T +
Sbjct: 76  LLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWLGY----DMTPKIVLIVINTTF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D  ++    + + W+   ++ +P    Y+  G   +   A+ +++
Sbjct: 132 PIVISILDGFRHCDRDAIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           VSE            GLG ++  + +   +  +   ++++    L     +  
Sbjct: 192 VSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238


>gi|255525861|ref|ZP_05392789.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185104|ref|ZP_06853514.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255510425|gb|EET86737.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049938|gb|EFG89362.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 247

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++   +I   ++F L+   I   +        P  I+       D      +   T    
Sbjct: 2   KKYTSSIIVGISFFLIWEAIARKIDAAYILPSPSKILQRTWELRDPL-FTVHLPATLWVT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              +VISL+F    A L + + ++   + P++ I Q++PI       V++F         
Sbjct: 61  FLGLVISLIFGVFLAILMSLNGKIQNAIYPLVVITQTVPITALAPIFVLWFGY------- 113

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +  + + A      + +T ++Y  L +  R++EE+  ++  +    F  L +P ++P  
Sbjct: 114 -SIWSKVLATILMTFFPITINVYDGLRSTKREMEELLITYGATKKDIFIKLKLPSALPYF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY--AMLTMLG 250
              + +S+         SE +          G+G +    + + D   +     +L+++ 
Sbjct: 173 FSALKISVPLSVIGAAISEWLG------AQSGLGYFSKRMMTQLDGAGVFAPIVILSLIA 226

Query: 251 VIFLY-DQLLFRPMIVWSN 268
           VIF++   +L   +I W N
Sbjct: 227 VIFVFIIDILENKLIKWRN 245



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++   + ++I+ I  + + I +     I + I P   +    P     P+ V    Y 
Sbjct: 55  ATLWVTFLGLVISLIFGVFLAILMSLNGKIQNAIYPLVVITQTVPITALAPIFVLWFGYS 114

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L  I  T + I  NV  G  +   + +E+  ++  T    +  + LP   P
Sbjct: 115 ----IWSKVLATILMTFFPITINVYDGLRSTKREMEELLITYGATKKDIFIKLKLPSALP 170

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    +   +   + +SE           +GLG +      +     V   ++I+  
Sbjct: 171 YFFSALKISVPLSVIGAAISEWLG------AQSGLGYFSKRMMTQLDGAGVFAPIVILSL 224

Query: 565 FVLAL 569
             +  
Sbjct: 225 IAVIF 229


>gi|254471300|ref|ZP_05084702.1| abcb protein [Pseudovibrio sp. JE062]
 gi|211959446|gb|EEA94644.1| abcb protein [Pseudovibrio sp. JE062]
          Length = 256

 Score = 86.9 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 109/260 (41%), Gaps = 16/260 (6%)

Query: 14  RIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++     L    L+  +  I     G      P + +  +   + + S  +Y   T  R
Sbjct: 8   KLWSGWGTLAGVFLIFALWQIGFEAFGSLVLPAPMEALGRLIDLVALPSGFEYILITAKR 67

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
             +  +++  F   +  +A  S  L ++  P + +   +P + ++   +++F        
Sbjct: 68  AFAGFLLASAFGISFGLIAGWSNTLSLLCKPFITVALGVPPIAWIVLALLWFG------- 120

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G +   IF +F S +  +     Q +    ++L+E+++SF +   Q+FW +  P  +  
Sbjct: 121 -GDDGTPIFTVFISTLPLIFAGALQGVRMREKELDEMAQSFHVPLIQRFWQVQAPQIVSY 179

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L      ++   W  VV +E++          GIG+ +A A    D  + +  ++ ++G+
Sbjct: 180 LFPAWATALGLSWKVVVMAELLS------STRGIGAGLAEARVNIDTASTMAWIVVVVGL 233

Query: 252 IFLYDQLLFRPMIVWSNKFR 271
           + + + +L  P+  +   ++
Sbjct: 234 LLVIEGMLLNPVKDYVEGWK 253



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 83/253 (32%), Gaps = 10/253 (3%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
                       +++   W          +    +  +        +        IT  R
Sbjct: 8   KLWSGWGTLAGVFLIFALWQIGFEAFGSLVLPAPMEALGRLIDLVALPSGFEYILITAKR 67

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
                ++AS   I  G+  G+   +S   +PF  +    P   +  L +         P 
Sbjct: 68  AFAGFLLASAFGISFGLIAGWSNTLSLLCKPFITVALGVPPIAWIVLALLWFGGDDGTP- 126

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 +   T   I    + G      +  E+A SFH+   + +  +  P I  Y    
Sbjct: 127 ---IFTVFISTLPLIFAGALQGVRMREKELDEMAQSFHVPLIQRFWQVQAPQIVSYLFPA 183

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA G +W   +++E+ S       T G+GA +AE+         +  ++++   +L +
Sbjct: 184 WATALGLSWKVVVMAELLS------STRGIGAGLAEARVNIDTASTMAWIVVVVGLLLVI 237

Query: 570 NRFLWHPLYLYGT 582
              L +P+  Y  
Sbjct: 238 EGMLLNPVKDYVE 250


>gi|330951234|gb|EGH51494.1| ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 288

 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A  ++  +   L +                  L    LP     +   ++   +I ++
Sbjct: 45  MIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +        R++ L G +  W++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWAVALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + LLF 
Sbjct: 217 FAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFA 274

Query: 262 PMIVWSNK 269
            +   + K
Sbjct: 275 NIERLTVK 282



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+  +I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWAVALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            L+  +     + 
Sbjct: 271 LLFANIERLTVKR 283


>gi|325926563|ref|ZP_08187879.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas perforans 91-118]
 gi|325543071|gb|EGD14518.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas perforans 91-118]
          Length = 294

 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   LAA +R    VL 
Sbjct: 71  LPGAVQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L VP ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 241 QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVR 288



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 86/271 (31%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L       R+H P    +      +    +I    V   + +  A Q+     +    
Sbjct: 28  PALGAATTPTRWHAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAVQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAIERLTVRR 289


>gi|289548484|ref|YP_003473472.1| binding-protein-dependent transporters inner membrane component
           [Thermocrinis albus DSM 14484]
 gi|289182101|gb|ADC89345.1| binding-protein-dependent transport systems inner membrane
           component [Thermocrinis albus DSM 14484]
          Length = 254

 Score = 86.9 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 11/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W      +   +    I          +  ++      ++ R+ +  +IA +   
Sbjct: 19  LIFMLWSISSKMIESPLFPSLIDIYKALLNAFEEGFLFSDLKTSIIRITIGWLIAILTGT 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI + +     + +          P   F PL +        +       L+  G   
Sbjct: 79  IIGILVSYYRWF-TPLDYINDFFRYLPVPAFLPLTLMWFGIGETSK----IFLIFLGVFV 133

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++  V      FP ++ EV  S  +   +   +IIL GI P          G AW   +
Sbjct: 134 QVIAMVANEIRNFPYEYIEVGRSLGMNRHQILYHIILEGIKPNLWDIYRINLGWAWTYLL 193

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V EVA+         GLG  + +S        +   ++++    L  + F 
Sbjct: 194 VGEVAA------ANEGLGYRLIKSQRFLQMDMIYAYLIVIGLIGLLSDSFF 238



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 21/248 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVP------RDIVDIVPITLDVHSLPQYASRTTLR 71
           N   L    + +G+I +L     +           DI   +    +   L      + +R
Sbjct: 6   NYVILFLLFIYVGLIFMLWSISSKMIESPLFPSLIDIYKALLNAFEEGFLFSDLKTSIIR 65

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +    +I++L   +   L +  R     L  I D  + +P+  FL  T+++F        
Sbjct: 66  ITIGWLIAILTGTIIGILVSYYRWFTP-LDYINDFFRYLPVPAFLPLTLMWFGIG----- 119

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E + IF IF      +   +   + N P +  EV RS  ++  Q  +++ +    P 
Sbjct: 120 ---ETSKIFLIFLGVFVQVIAMVANEIRNFPYEYIEVGRSLGMNRHQILYHIILEGIKPN 176

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L     +++   W +++  E+    +      G+G  +  + +   +  I   ++ +  +
Sbjct: 177 LWDIYRINLGWAWTYLLVGEVAAANE------GLGYRLIKSQRFLQMDMIYAYLIVIGLI 230

Query: 252 IFLYDQLL 259
             L D   
Sbjct: 231 GLLSDSFF 238


>gi|239928414|ref|ZP_04685367.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291436741|ref|ZP_06576131.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339636|gb|EFE66592.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 266

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+ IG         Q         PA    PL +               +L++    W
Sbjct: 86  PVGLLIGADERARRSTQLILDFGRTVPAIALLPLFLLMFGATRS----LGLVLIVVSAVW 141

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++              + V  ++H+T W   R++I P + P+   G   A   +   +I
Sbjct: 142 PVIIQTSYAVGEISPQLRRVGQAYHLTRWHRLRHLIAPSMLPFVFVGLRIAATISLLMAI 201

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            SE            GLG  + ++ +        +
Sbjct: 202 SSEFLGGSD------GLGYLLLQAMQINDTHRAFV 230



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 14/235 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR+   +  LL   +V  +             P + ++               + +    
Sbjct: 14  RRLVNRLLALLVAFVVWHLFARGPGSSSGFPTPLESMESAVDLAGTSVYWSNIATSVETA 73

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  + +++L       L     R       ILD  +++P +  L   ++ F         
Sbjct: 74  LLGLGLAVLVGLPVGLLIGADERARRSTQLILDFGRTVPAIALLPLFLLMFGA------- 126

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +  I  S VW +      ++  I   L  V +++ L+ W +  +L  P  +P +
Sbjct: 127 -TRSLGLVLIVVSAVWPVIIQTSYAVGEISPQLRRVGQAYHLTRWHRLRHLIAPSMLPFV 185

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
              + ++ +      ++SE +   D      G+G  +  A++  D         T
Sbjct: 186 FVGLRIAATISLLMAISSEFLGGSD------GLGYLLLQAMQINDTHRAFVYSFT 234


>gi|283798405|ref|ZP_06347558.1| ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291073990|gb|EFE11354.1| ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295092851|emb|CBK78958.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Clostridium cf. saccharolyticum K10]
          Length = 253

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 10/201 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +   G +T+   ++ + I+ ++ + +GI +     +   + P   +    P  V 
Sbjct: 46  ADRSVLFSHGLVTVSEALLGMGISLVLAVLLGILMDAFAPVRRCVYPILVVTQTVPMIVL 105

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+++  +  + L P +   +LM F   + +  +   G +    ++  +  SF    W  
Sbjct: 106 SPILIIYLG-FGLAPKILTVVLMCF---FPVAVSFTDGMAQLDPEYMYLVRSFGAGKWEA 161

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R + +P   P  ++G   A   + + ++V E            GLG Y+          
Sbjct: 162 YRLVKIPAAIPSLLSGLKVAATYSISGAVVGEWIGAQK------GLGYYLLRVKNGYMLD 215

Query: 554 EVVLGVLIMCCFVLALNRFLW 574
           +V   VL++    L +N  +W
Sbjct: 216 KVFACVLVIVFLSLCMNLAIW 236



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P     ++ +  D   L  +   T    L  M ISL+   +   L      +   + PIL
Sbjct: 35  PSPAKVVLALAADRSVLFSHGLVTVSEALLGMGISLVLAVLLGILMDAFAPVRRCVYPIL 94

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            + Q++P++      ++Y       K        I  +     + +  S    +  +  +
Sbjct: 95  VVTQTVPMIVLSPILIIYLGFGLAPK--------ILTVVLMCFFPVAVSFTDGMAQLDPE 146

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
              + RSF    W+ +  + +P ++P L+  + ++ +      V  E I          G
Sbjct: 147 YMYLVRSFGAGKWEAYRLVKIPAAIPSLLSGLKVAATYSISGAVVGEWIG------AQKG 200

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +G Y+        L  +   +L ++ +    +  ++
Sbjct: 201 LGYYLLRVKNGYMLDKVFACVLVIVFLSLCMNLAIW 236


>gi|307325743|ref|ZP_07604943.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306888531|gb|EFN19517.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 269

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 83/272 (30%), Gaps = 16/272 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF---CVVCGVAIGIAWQSIGYIVNHFTYQ 374
           R LG  R                 +++ +  +       G+   +  +         T  
Sbjct: 2   RRLGKRRLRVDLRARPELLLAPAVFVVTMLAWEFAVPAFGIDDYVLPRPSQIFDALRTQL 61

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                     +T+   +   ++     + +G  I     I     P+       P     
Sbjct: 62  ADPLFWGHLKVTVLESLYGFLLGVAAALVLGTAISQVRLIERTFMPYVVAFQTVPKVALA 121

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V    +   +  +  +++    + + +L NVI G  +   D  ++ + F    ++ +
Sbjct: 122 PLFVVWFGFGMTSKVVMAAVI----SFFPVLINVIEGLRSADADRIQMLTVFGAGRFQVF 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P+   G       A   ++V E            GLG  + ++        
Sbjct: 178 RMVRLPSALPFLFAGLDIGIVFAILGAVVGEFIG------AKEGLGYLLLQTNYNFDIAG 231

Query: 555 VVLGVLIMCCFVLA---LNRFLWHPLYLYGTR 583
           +   ++++    L    + RF    L  +   
Sbjct: 232 MFAVLVVLSVLGLIAHFIIRFAQKRLVFWAEE 263



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 85/234 (36%), Gaps = 17/234 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I D +   L       +   T L  L   ++ +    V  T  ++ R +    +
Sbjct: 47  LPRPSQIFDALRTQLADPLFWGHLKVTVLESLYGFLLGVAAALVLGTAISQVRLIERTFM 106

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +      VV+F      KV+ A + + F         +  ++ + L + 
Sbjct: 107 PYVVAFQTVPKVALAPLFVVWFGFGMTSKVVMAAVISFF--------PVLINVIEGLRSA 158

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++   F    +Q F  + +P ++P L   + + +       V  E I   +    
Sbjct: 159 DADRIQMLTVFGAGRFQVFRMVRLPSALPFLFAGLDIGIVFAILGAVVGEFIGAKE---- 214

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNKFRL 272
             G+G  +       D+  +   ++ +  +  +     +   + ++ W+ + R+
Sbjct: 215 --GLGYLLLQTNYNFDIAGMFAVLVVLSVLGLIAHFIIRFAQKRLVFWAEENRV 266


>gi|302340533|ref|YP_003805739.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637718|gb|ADK83145.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 240

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 97/237 (40%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  + V GI++ +   +   T+P   V IV I +    + Q    +  R+++A+ +  +
Sbjct: 12  LVLVIGVWGILSFIYPPLVIPTIPSVCVKIVEI-MTHADMLQIILVSFTRLITALTVGTI 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F    L  K      +  P++ ++Q IP +  L   +++F              AIF 
Sbjct: 71  AGFAIGILCGKFTVFREITGPLIGVLQVIPPVALLILAILWFGFNG--------KPAIFI 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +    M  S+   + NI     E+  +FRL+    F  + +P   P L     +S+ 
Sbjct: 123 ASMAIFPIMVISVQHGIMNIDPKTLEMGETFRLTKRSMFLDIIIPSIRPSLTSGWRISLG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  A + +V+G+ +    GIG  ++ A    +   ++   +  + + ++ D L
Sbjct: 183 L------ACKTMVMGEVLTTPTGIGGALSQARMNLEPETVIAWTVITVLIFYVIDWL 233



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++   W  +       +        V          ++ +  ++  R++  + + +I   
Sbjct: 14  LVIGVWGILSFIYPPLVIPTIPSVCVKIVEIMTHADMLQIILVSFTRLITALTVGTIAGF 73

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI  G          P   +L   P      L +    +         ++ +     +
Sbjct: 74  AIGILCGKFTVFREITGPLIGVLQVIPPVALLILAILWFGFNGKP-----AIFIASMAIF 128

Query: 463 YI-LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            I + +V  G         E+  +F +T    +  II+P I P   +G   + G A    
Sbjct: 129 PIMVISVQHGIMNIDPKTLEMGETFRLTKRSMFLDIIIPSIRPSLTSGWRISLGLACKTM 188

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           ++ EV +        TG+G  ++++        V+   +I       ++
Sbjct: 189 VMGEVLT------TPTGIGGALSQARMNLEPETVIAWTVITVLIFYVID 231


>gi|311696072|gb|ADP98945.1| binding-protein-dependent transport systems inner membrane
           component [marine bacterium HP15]
          Length = 237

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 107/245 (43%), Gaps = 15/245 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           ++  +   LL        P  ++D +        L  +   T  R++ A V+++      
Sbjct: 1   MLWALTAWLLQSPL-LPTPVSVLDTLVRESASGELWHHLGATLARVVVAFVLAMAIGTAI 59

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             +  +S+    +  P+L ++ ++P L  +    V+F  +         +AA+ A+  ++
Sbjct: 60  GIVMGRSQTTNALFDPLLVLLLNLPALVTIILMYVWFGLVE--------VAAVMAVVINK 111

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V N+  ++ +   ++   LEE++  +  + WQ+   + VP   P L+      ++  W  
Sbjct: 112 VPNVAVTVREGARSLDYRLEEMATVYEFTRWQRLREVWVPQLFPYLMAATRGGLALIWKI 171

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           V+  E++          G+G  + +A +  D+ AIL   L  + V+ L +  + +P+   
Sbjct: 172 VLVVELLG------RSSGVGFQLHMAFQVFDVAAILAYSLAFIAVVQLIELAILQPLERR 225

Query: 267 SNKFR 271
           S+++R
Sbjct: 226 SSRWR 230



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 83/238 (34%), Gaps = 10/238 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W      +   +    +  +           +      T+ RVVV  ++A  I   +G
Sbjct: 1   MLWALTAWLLQSPLLPTPVSVLDTLVRESASGELWHHLGATLARVVVAFVLAMAIGTAIG 60

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +G     ++   P   LL   PA V   L+        +   + + +         + 
Sbjct: 61  IVMGRSQTTNALFDPLLVLLLNLPALVTIILMYVWFGLVEVAAVMAVVI----NKVPNVA 116

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             V  GA +     +E+A+ +  T W+  R + +P +FPY +          W   +V E
Sbjct: 117 VTVREGARSLDYRLEEMATVYEFTRWQRLREVWVPQLFPYLMAATRGGLALIWKIVLVVE 176

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +        R++G+G  +  + +      ++   L     V  +   +  PL    +R
Sbjct: 177 LLG------RSSGVGFQLHMAFQVFDVAAILAYSLAFIAVVQLIELAILQPLERRSSR 228


>gi|168183488|ref|ZP_02618152.1| ABC transporter, permease protein [Clostridium botulinum Bf]
 gi|237796627|ref|YP_002864179.1| ABC transporter permease [Clostridium botulinum Ba4 str. 657]
 gi|182673351|gb|EDT85312.1| ABC transporter, permease protein [Clostridium botulinum Bf]
 gi|229263954|gb|ACQ54987.1| ABC transporter, permease protein [Clostridium botulinum Ba4 str.
           657]
          Length = 267

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  ++  I  +++   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V+ G     ND   +  +F  T W+   +
Sbjct: 128 IIFWVG----NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWKILIH 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPATIPTLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLAL 569
             ++I+      +
Sbjct: 238 FSIIILAILAYLM 250



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +   +   L     A L   S     VL 
Sbjct: 51  TSTPSRMWKSLVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     ++ A L +I             S+      +
Sbjct: 111 PYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++F  + W+   +L +P ++P L+  + +++   W  V+  E +V  +    
Sbjct: 163 DNDKIRLMKTFGATKWKILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++++++ +  + +L 
Sbjct: 219 --GLGFLIIYGGQISQLDMVMFSIIILAILAYLM 250


>gi|221070042|ref|ZP_03546147.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220715065|gb|EED70433.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 301

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 91/253 (35%), Gaps = 6/253 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
               +       ++     V  +L + W  +V G+ +         ++      D + + 
Sbjct: 36  AATPWLLQPKVQRVLLPALVGLVLLLVWQALVTGLELPPYLVPSPLLMLQTLMTDWVALG 95

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+   ++   +A++  + +         I + + P+A LL   P     PL++  
Sbjct: 96  LSLWVTVKITLLAFALATVAGVLISFVFVQSKLIETALFPYAVLLQVTPIVAVAPLIIIW 155

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V     +P L + +       + I+ N   G  +   D          T  +    + +P
Sbjct: 156 VK----DPVLSMVICAALVALFPIISNTTLGLRSVEPDLLAYFKLNRATRLQVLMRLRIP 211

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY+  G   + G A   ++V+E  +      +  GL   I ++  + + P +   +L
Sbjct: 212 SALPYFFGGLRISSGLALIGAVVAEFVAG--TGGQGAGLAYQILQAGFQLNIPRMFAALL 269

Query: 561 IMCCFVLALNRFL 573
           ++    +AL   +
Sbjct: 270 LISLTGVALFVLM 282



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 10/217 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            VP  ++ +  +  D  +L      T    L A  ++ +   + + +  +S+ +   L P
Sbjct: 76  LVPSPLLMLQTLMTDWVALGLSLWVTVKITLLAFALATVAGVLISFVFVQSKLIETALFP 135

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
              ++Q  PI+      +++  +     VI A L A+F I +        +    L ++ 
Sbjct: 136 YAVLLQVTPIVAVAPLIIIWVKDPVLSMVICAALVALFPIIS--------NTTLGLRSVE 187

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            DL    +  R +  Q    L +P ++P     + +S        V +E +         
Sbjct: 188 PDLLAYFKLNRATRLQVLMRLRIPSALPYFFGGLRISSGLALIGAVVAEFVAGTGGQGA- 246

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+   I  A  + ++  +  A+L +         L+
Sbjct: 247 -GLAYQILQAGFQLNIPRMFAALLLISLTGVALFVLM 282


>gi|319942082|ref|ZP_08016401.1| hypothetical protein HMPREF9464_01620 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804466|gb|EFW01344.1| hypothetical protein HMPREF9464_01620 [Sutterella wadsworthensis
           3_1_45B]
          Length = 249

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 80/238 (33%), Gaps = 23/238 (9%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------------YVIWLGCITMFRVV 391
            IF       VA+ + WQ     +      D L               I    ++++R++
Sbjct: 4   SIFIRYFCGSVAVLLLWQLGSVTLGSDILPDPLRALGGFWDALKDPEFIGHIGLSLYRLL 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             + +A  +  P+G+ +G          P   +    P  V  P+  + +     +    
Sbjct: 64  TALALAIAVSFPLGVLLGHSKAADWLGAPVTFITLPLPKIVLLPVFFTILGLGDSS---- 119

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             LL+   T + IL  V   A A    ++    S   +      ++ +P   P       
Sbjct: 120 RILLIALATGYQILVIVRESALALNPSYELAMRSMGASTAERVLHVYIPAALPSLFMALK 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A   A     ++E  +         GLG YI  +   G    + +G+L MC   +AL
Sbjct: 180 AASSTAVAVLFLAESFA------TDAGLGWYIMNAWGLGDMDGMFVGILGMCVLGVAL 231



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A +L+  + ++ L G      P   +      L       +   +  R+L+A+ +++  
Sbjct: 14  VAVLLLWQLGSVTL-GSDILPDPLRALGGFWDALKDPEFIGHIGLSLYRLLTALALAIAV 72

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F    L   S+    +  P+  I   +P +  L             +        I  I
Sbjct: 73  SFPLGVLLGHSKAADWLGAPVTFITLPLPKIVLLPVFFTILGLGDSSR--------ILLI 124

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +   + +S   +    E   RS   S  ++  ++ +P ++P L   +  + S 
Sbjct: 125 ALATGYQILVIVRESALALNPSYELAMRSMGASTAERVLHVYIPAALPSLFMALKAASST 184

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLL 259
               +  +E            G+G YI  A    D+  +   +L M  +         LL
Sbjct: 185 AVAVLFLAESFA------TDAGLGWYIMNAWGLGDMDGMFVGILGMCVLGVALYAGIGLL 238

Query: 260 FRPMIVWS 267
            R    W+
Sbjct: 239 ERLACPWA 246


>gi|188992975|ref|YP_001904985.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167734735|emb|CAP52945.1| ABC transporter permease [Xanthomonas campestris pv. campestris]
          Length = 286

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P          L    L +    +   +    V+ ++  FV   LAA +R    +L 
Sbjct: 63  LPSPWQTAQAFYTGLLSGELLRRVGTSLRVLAQGYVVGVVLAFVLTALAASTRWGRDLLG 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 123 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 175 PDTLRMAGRNYGLRGPRYVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 232

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 233 QGGLGWYIFQNRNELYTDRVFAGLAMVIALGLLVEGVVFQAIERLTVR 280



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 11/272 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L +     R+  P    +      +     +        + +   WQ+          
Sbjct: 20  PALLQVHAQARWQAPGWLRKALVLAVLVAAWYVAARVAADDLMLPSPWQTAQAFYTGLLS 79

Query: 374 QDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            ++L  +     T  RV+    ++  ++   +             +     +    PA  
Sbjct: 80  GELLRRVG----TSLRVLAQGYVVGVVLAFVLTALAASTRWGRDLLGTLTAMFNPLPAIA 135

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +        +    L  +++    W +     AG  A P+  +    ++ + G R
Sbjct: 136 LLPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPR 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           +   +++P   P  ++G       AW   I +E+           GLG YI ++  +   
Sbjct: 192 YVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYT 249

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             V  G+ ++    L +   ++  +     R 
Sbjct: 250 DRVFAGLAMVIALGLLVEGVVFQAIERLTVRR 281


>gi|126649773|ref|ZP_01722009.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905]
 gi|126593492|gb|EAZ87437.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905]
          Length = 309

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +       +   +L  +   T +  +   +   L     A L   S  L  VL P
Sbjct: 50  SSPTQVWHTFIEKVTDGTLTLHVGVTLMETVIGFIAGTLLGTFIAILLWWSPFLSKVLDP 109

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V      PG      + A+ +I  +     T  +Y +   + 
Sbjct: 110 YLVILNAMPKVALGPILIVALG---PGYFSIIAMGALISIIIT-----TIVVYTAFKGVD 161

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  S WQ F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 162 PNYSKVLQTFGASRWQIFREVILPASFPTIISTLKVNVGLSWVGVIVGEFLVASK----- 216

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++L +     +  Q++
Sbjct: 217 -GLGYLIIYGFQVFNFNLVLMSLLIIAFFATIMYQVV 252



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   V+  I  +++   + I + + P +S  + P+  +L A P     P+
Sbjct: 66  GTLTLHVGVTLMETVIGFIAGTLLGTFIAILLWWSPFLSKVLDPYLVILNAMPKVALGPI 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +   + +    +  +    +       V         ++ +V  +F  + W+ +R 
Sbjct: 126 LIVALGPGYFS----IIAMGALISIIITTIVVYTAFKGVDPNYSKVLQTFGASRWQIFRE 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP  FP  ++      G +W   IV E        + + GLG  I    +  +F  V+
Sbjct: 182 VILPASFPTIISTLKVNVGLSWVGVIVGEFL------VASKGLGYLIIYGFQVFNFNLVL 235

Query: 557 LGVLIMCCFVLAL 569
           + +LI+  F   +
Sbjct: 236 MSLLIIAFFATIM 248


>gi|226311814|ref|YP_002771708.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226094762|dbj|BAH43204.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 268

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 14/213 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I     + L   SL  +   T    +   ++  +   V AT+   S  L  VL P L
Sbjct: 56  PTKIWAQFWLQLQDGSLLPHVGLTVWETIIGFLLGTILGTVMATIIWWSPFLSRVLEPYL 115

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I  S+P +      +V F            L+ I       V   T ++Y S   + ++
Sbjct: 116 VIANSMPKVALGPVFIVGFGPGL--------LSVIAMGCAISVIITTINVYTSFKEVNQN 167

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             +V ++   S  Q F  + +P ++P L+  + +++   W  V+  E +V         G
Sbjct: 168 YVKVVQTLGGSKRQIFTLVILPATIPTLLATLKVNVGLSWVGVIVGEFLV------SQQG 221

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +G  I    +  +   ++ ++  +  +  L  Q
Sbjct: 222 LGYLIIYGFQVFNFTLVMMSLAIIAVIATLMYQ 254



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T++  ++  ++ +I+   +   I + P +S  ++P+  +  + P     P+
Sbjct: 70  GSLLPHVGLTVWETIIGFLLGTILGTVMATIIWWSPFLSRVLEPYLVIANSMPKVALGPV 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       L+    +  +    +      NV         ++ +V  +   +  + +  
Sbjct: 130 FIVGFGPGLLS----VIAMGCAISVIITTINVYTSFKEVNQNYVKVVQTLGGSKRQIFTL 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  +       G +W   IV E        +   GLG  I    +  +F  V+
Sbjct: 186 VILPATIPTLLATLKVNVGLSWVGVIVGEFL------VSQQGLGYLIIYGFQVFNFTLVM 239

Query: 557 LGVLIMCCFVLAL 569
           + + I+      +
Sbjct: 240 MSLAIIAVIATLM 252


>gi|317053650|ref|YP_004118784.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952755|gb|ADU72228.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 281

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 13/202 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+ +  +I+S++ I +G+  G      +  +P    +   P   F PL +       
Sbjct: 89  SLYRIAIAFVISSLMSIVIGVMAGCYGLFKAIFEPLVDFIRYMPVVAFVPLTILWTG--- 145

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              ++   L++  GT +  +  ++      P DF  +  +  +   +    I+LP   P 
Sbjct: 146 -TDDVQKFLVIWIGTFFQQVLMMMDAVKRVPVDFIGLGRTLGMPDRKILLRIVLPAALPA 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                  + G AW   +++E+ +       T+GLG  I  S        ++  +L++   
Sbjct: 205 IWDALRISLGWAWTWLVLAELVA------STSGLGYRIVVSQRYFQTDTIIGYILLLGLL 258

Query: 566 VLALNRFLW---HPLYLYGTRC 584
            L  ++ +      L+ Y  R 
Sbjct: 259 GLITDQLMRAAERVLFRYNRRR 280



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 84/201 (41%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L      +  R+  A VIS L + V   +A        +  P++D ++ +P++ F+  
Sbjct: 80  GTLWSDVQSSLYRIAIAFVISSLMSIVIGVMAGCYGLFKAIFEPLVDFIRYMPVVAFVPL 139

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           T+++            ++     I+    +     M  ++  +P D   + R+  +   +
Sbjct: 140 TILWTGTD--------DVQKFLVIWIGTFFQQVLMMMDAVKRVPVDFIGLGRTLGMPDRK 191

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +   + +S+   W ++V +E++          G+G  I ++ +    
Sbjct: 192 ILLRIVLPAALPAIWDALRISLGWAWTWLVLAELVA------STSGLGYRIVVSQRYFQT 245

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+  +L +  +  + DQL+
Sbjct: 246 DTIIGYILLLGLLGLITDQLM 266


>gi|15597503|ref|NP_250997.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9948340|gb|AAG05695.1|AE004657_2 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 288

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    LP  A  + L +    ++ ++  FV  +LA  ++    +L  +  
Sbjct: 69  LQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTA 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVF 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|254240746|ref|ZP_04934068.1| hypothetical protein PA2G_01411 [Pseudomonas aeruginosa 2192]
 gi|126194124|gb|EAZ58187.1| hypothetical protein PA2G_01411 [Pseudomonas aeruginosa 2192]
          Length = 288

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    LP  A  + L +    ++ ++  FV  +LA  ++    +L  +  
Sbjct: 69  LQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTA 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVF 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|107101753|ref|ZP_01365671.1| hypothetical protein PaerPA_01002797 [Pseudomonas aeruginosa PACS2]
 gi|218891719|ref|YP_002440586.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254235317|ref|ZP_04928640.1| hypothetical protein PACG_01217 [Pseudomonas aeruginosa C3719]
 gi|126167248|gb|EAZ52759.1| hypothetical protein PACG_01217 [Pseudomonas aeruginosa C3719]
 gi|218771945|emb|CAW27724.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 288

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    LP  A  + L +    ++ ++  FV  +LA  ++    +L  +  
Sbjct: 69  LQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTA 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVF 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|241554188|ref|YP_002979401.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240863494|gb|ACS61156.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 296

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 19/237 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---- 383
           P    +L     + + L I    +V    +G A   I   +    +      + L     
Sbjct: 36  PRARRRLGPGPAIPFGLQIGPALLVLTWVVGSALGWIDPRILSAPWTVAEAFVRLIEQGR 95

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  +  R ++ + I  +I   + +  G      + I    Q+  A P     PL++
Sbjct: 96  LQDNFVTSATRALLGLSIGLLIGTILALIAGLSRIGEALIDGPVQIKRAIPTLALIPLLI 155

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        ++L +I      I  +      +  + + E+A +  ++   +   ++
Sbjct: 156 LWFGIGESMKVTTIALAVIV----PIYIHTHNALRSIDSRYVELAETLRMSQKDFILQVV 211

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           LPG  P ++ G   A    W + +V E  +       T+GLG  I  +   G    +
Sbjct: 212 LPGALPGFLLGLRFAVTLCWVSLVVVEQIN------ATSGLGYMIDLARNYGQTDVI 262



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 102/269 (37%), Gaps = 25/269 (9%)

Query: 9   PFISRRIFPNIFDLLAF-----VLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHS 60
           P   RR+ P             +LV+  +     G  +    + P  + +     ++   
Sbjct: 36  PRARRRLGPGPAIPFGLQIGPALLVLTWVVGSALGWIDPRILSAPWTVAEAFVRLIEQGR 95

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R L  + I LL   + A +A  SR    ++   + I ++IP L  +   +
Sbjct: 96  LQDNFVTSATRALLGLSIGLLIGTILALIAGLSRIGEALIDGPVQIKRAIPTLALIPLLI 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV    LA I  I+           + +L +I     E++ + R+S     
Sbjct: 156 LWFGIGESMKVTTIALAVIVPIY--------IHTHNALRSIDSRYVELAETLRMSQKDFI 207

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++PG +  +  +++  W  +V  E I          G+G  I LA        
Sbjct: 208 LQVVLPGALPGFLLGLRFAVTLCWVSLVVVEQI------NATSGLGYMIDLARNYGQTDV 261

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           IL  ++  + +  + D   +LL R  + W
Sbjct: 262 ILVGLVVYVLLGLVSDGLVRLLERRALSW 290


>gi|219667959|ref|YP_002458394.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219538219|gb|ACL19958.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 340

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 107/267 (40%), Gaps = 19/267 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           +LP   ++ ++ +     A +LV  +    +     +   VP     +  +T ++ +L  
Sbjct: 82  LLPKLRAKMLYLSWLLTAAVLLVAALDMATLKTGHFRLPFVPSPDKILSSVTSNLETLAV 141

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +   + + +VI ++   +   L   S+      +P+L ++  +P   +L   +V F
Sbjct: 142 SLYFSMKLLFTGIVIGIISGMISGILLGWSQICNYWFMPVLKMIGPVPSAAWLPIVMVLF 201

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +  A++F I  S  + +T  +  ++ +  + L E +R           ++
Sbjct: 202 AT--------SRQASVFLIVLSIWFPLTLMVSSAIRDTDKRLVETARVLGAGEVYIMLHV 253

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + M +S  +  ++ +EM+ V        G+G YI  A    +   I  
Sbjct: 254 ALPAALPAMFTGLFMGLSSSFGALIIAEMLGV------EAGLGWYIKWAEAWGEYAKIFS 307

Query: 244 AMLTMLGVIFLYDQLLFR---PMIVWS 267
            +   + + F+    LFR    ++ W 
Sbjct: 308 TVGIFIIIFFILMDTLFRLRNRLLKWQ 334



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 10/173 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M  +   I+I  I  +  GI +G+    +    P  +++   P+  + P+V+   + 
Sbjct: 144 YFSMKLLFTGIVIGIISGMISGILLGWSQICNYWFMPVLKMIGPVPSAAWLPIVMVLFA- 202

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++    + +   V +          E A            ++ LP   
Sbjct: 203 ---TSRQASVFLIVLSIWFPLTLMVSSAIRDTDKRLVETARVLGAGEVYIMLHVALPAAL 259

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           P   TG       ++ A I++E+           GLG YI  +   G + ++ 
Sbjct: 260 PAMFTGLFMGLSSSFGALIIAEMLG------VEAGLGWYIKWAEAWGEYAKIF 306


>gi|296389283|ref|ZP_06878758.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
          Length = 288

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 87/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                ++   L    LP  A  + L +    ++ ++  FV  +LA  ++    +L  +  
Sbjct: 69  LQTARVLGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTA 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVF 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|302024269|ref|ZP_07249480.1| ABC-type glycine betaine transport system protein [Streptococcus
           suis 05HAS68]
          Length = 503

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                + +  +RL    + I  I Q+IP L  L   + +             L A+ A+ 
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIG--------TLPAVVALV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +       L  I   LEE + +F ++ W+K     +  +MP L+  +       
Sbjct: 89  IYAIFPILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIR------ 142

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                AS MI+   T   ++   G+GS+I L I   D   IL   ++   +  L+
Sbjct: 143 ----TASIMIIGTATLAALVGAGGLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +  +  ++        +    P+     L +  +    L   + L +  IF   
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIF--- 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL   + G        +E A++F +  W   +   L    P  ++G  TA       +
Sbjct: 94  -PILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++ +   G       GLG++I    ++     +++G +      +  
Sbjct: 153 TLAALVGAG-------GLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193


>gi|260889808|ref|ZP_05901071.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Leptotrichia
           hofstadii F0254]
 gi|260860414|gb|EEX74914.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Leptotrichia
           hofstadii F0254]
          Length = 506

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+VI+L+            +++  +++ +  IMQ++P L  L   +            
Sbjct: 28  FYALVIALIIAIPLGIYLTYKKKIAEIIIGLTAIMQTVPSLALLGLLIPIMGIG------ 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  +  + Y  +  +       SR+  ++  Q+ + + +P +MP +
Sbjct: 82  --RKPAITALVIYALLPLLRNTYTGINGVDPVYMVASRAMGMNKMQQLFKVQLPLAMPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +          + +I  G     +        L +   ++  IL   +    + 
Sbjct: 140 MAGIRTATVLIIGTATLASLIGAGGLGKLI-------LLGLDRNNMNLILLGAIPSALLA 192

Query: 253 FLYDQLL 259
            L+D +L
Sbjct: 193 VLFDFVL 199



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++IA II IP+GI++ ++  I+  I     ++   P+     L++  +         
Sbjct: 28  FYALVIALIIAIPLGIYLTYKKKIAEIIIGLTAIMQTVPSLALLGLLIPIMGIGRKPAIT 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      +L N   G +     +   + +  +   +    + LP   P  + G 
Sbjct: 88  ALVIYALL----PLLRNTYTGINGVDPVYMVASRAMGMNKMQQLFKVQLPLAMPVIMAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++ +   ++LG +      +  +
Sbjct: 144 RTATVLIIGTATLASLIGAGGLGKLIL-------LGLDRNNMNLILLGAIPSALLAVLFD 196

Query: 571 RFLWHPL 577
            F+   L
Sbjct: 197 -FVLKKL 202


>gi|111023357|ref|YP_706329.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
 gi|110822887|gb|ABG98171.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
          Length = 293

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 91/278 (32%), Gaps = 8/278 (2%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
           T     +        +P   +     R    +       F  L     ++    + WF +
Sbjct: 2   TEAPAVLPLPVATARTPAVTDTGSQARRPRTVTVATGLLFPVLSLAGALALWSAVSWFVL 61

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
                  +   +     +   ++ +  ++    +T    +V  ++A ++ +  G+ +   
Sbjct: 62  SPERQFLLPPPNRVLTQSLLDWKHLSPMLEALAVTARVALVGFVVAVLVGVGTGVLMSRA 121

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             I   I P+A +L   P     PL+     Y         +L+ +    + I+ N   G
Sbjct: 122 KWIERIIYPYAVVLQVIPILAIVPLIGLWFGYG----MTARTLVCVLIAAFPIITNTHFG 177

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +      E+ +    + W     + L    P  + G  TA G     +I+ ++     
Sbjct: 178 LQSVDRGLHELFTLGRASRWDRLVKLELRAALPAVLAGIRTASGLVVVGAIIGDMF---- 233

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 G+G  +     +    +++  ++I   F +A+
Sbjct: 234 FAKGEPGIGTLLDVFRSRLQSEDLIAAIVIASVFGVAV 271



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 15/235 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL--PQYASRTTLRM-LSAMVISL 80
           A  L   +   +L   ++  +P     +    LD   L     A   T R+ L   V+++
Sbjct: 49  ALALWSAVSWFVLSPERQFLLPPPNRVLTQSLLDWKHLSPMLEALAVTARVALVGFVVAV 108

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       L ++++ +  ++ P   ++Q IPIL  +    ++F      + +   L A F
Sbjct: 109 LVGVGTGVLMSRAKWIERIIYPYAVVLQVIPILAIVPLIGLWFGYGMTARTLVCVLIAAF 168

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I T        + +  L ++ R L E+    R S W +   L +  ++P ++  +  + 
Sbjct: 169 PIIT--------NTHFGLQSVDRGLHELFTLGRASRWDRLVKLELRAALPAVLAGIRTAS 220

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 VV   +I         PGIG+ + +         ++ A++         
Sbjct: 221 GL----VVVGAIIGDMFFAKGEPGIGTLLDVFRSRLQSEDLIAAIVIASVFGVAV 271


>gi|116050251|ref|YP_790932.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|313110797|ref|ZP_07796651.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|115585472|gb|ABJ11487.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|310883153|gb|EFQ41747.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 288

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    LP  A  + L +    ++ ++  FV  +LA  ++    +L  +  
Sbjct: 69  LQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTA 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +    + VP ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVF 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R+   I++P   P  + G  
Sbjct: 153 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVEN 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFGSIERLTVKR 283


>gi|222087619|ref|YP_002546156.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725067|gb|ACM28223.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 293

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 107/277 (38%), Gaps = 23/277 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDV 58
           L     R+     + +   V ++G+  +               T +   + + V    + 
Sbjct: 28  LKAITKRKYVVLFWQVAILVAILGVWQLASDLHWIDPFFYSSPTAIGYRLYEWVTEGTEN 87

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T    L   VI  +   +      +++    +L   +  + SIP +     
Sbjct: 88  GSLWYHLGVTMEEALIGFVIGSVTGVLVGVALGRNKLASDILSIYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FVMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASNWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S S   F ++ +   +VG+ V  L GIG  I++A    D 
Sbjct: 200 VTRNVILPSAMSWIFASLHVSFS---FAIIGA---IVGEFVGSLAGIGYLISIAKGTYD- 252

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            A LYA + ++ V+ L  + +   +     ++R +++
Sbjct: 253 AAGLYAAIILVMVVTLGAEYVMTLVENRITRWRPQQS 289



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 68/200 (34%), Gaps = 10/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   + +   +TM   ++  +I S+  + VG+ +G     S  +  + + + + P  V 
Sbjct: 85  TENGSLWYHLGVTMEEALIGFVIGSVTGVLVGVALGRNKLASDILSIYIKAINSIPRVVL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+ V  +     +      +++ F     +  N   G      +    A     + W+ 
Sbjct: 145 APIFVMIMGLGLPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASNWQV 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R +ILP    +       +   A   +IV E            G+G  I+ +       
Sbjct: 201 TRNVILPSAMSWIFASLHVSFSFAIIGAIVGEFVG------SLAGIGYLISIAKGTYDAA 254

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +   ++++    L     +
Sbjct: 255 GLYAAIILVMVVTLGAEYVM 274


>gi|257463203|ref|ZP_05627602.1| putative choline ABC transporter, osmoprotectant binding protein
           [Fusobacterium sp. D12]
 gi|317060791|ref|ZP_07925276.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313686467|gb|EFS23302.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 507

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +  ++L   ++ I  ++Q+IP L  L F + +             + A+ A+    ++ +
Sbjct: 45  SHRKKLSEWILHITGVIQTIPSLALLGFFIPFLGIGM--------VPAVLALVLYAIFPI 96

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +   +L  I   LEE + +F ++ W+K     +  +MP ++  +  S       ++ +
Sbjct: 97  LQNTITALQEIDPSLEEAATAFGMTKWEKLKKFELTLAMPIIISGVRTSA----VMIIGT 152

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             +     +I   G+GS+I L I   +   IL   +T   +  L++
Sbjct: 153 ATLAA---LIGAGGLGSFILLGIDRNNGNLILMGAMTSACLAILFN 195



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 11/160 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           R  +S  I     ++   P+       +  +        +   L ++    + IL N I 
Sbjct: 47  RKKLSEWILHITGVIQTIPSLALLGFFIPFLGIG----MVPAVLALVLYAIFPILQNTIT 102

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                    +E A++F +T W   +   L    P  ++G  T+       + ++ +   G
Sbjct: 103 ALQEIDPSLEEAATAFGMTKWEKLKKFELTLAMPIIISGVRTSAVMIIGTATLAALIGAG 162

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                  GLG++I    ++ +   +++G +   C  +  N
Sbjct: 163 -------GLGSFILLGIDRNNGNLILMGAMTSACLAILFN 195


>gi|24021277|gb|AAN40987.1| TauC protein [Bradyrhizobium japonicum]
          Length = 263

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 19/202 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+   ++  +I S+  + +G W   +P +++   P+ +++ A P  V  P+    +  
Sbjct: 65  GITLAESILAFVIGSLSGVLIGFWFARQPLVAAVFDPYVKMVNALPRVVLAPIFALWLGL 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G         +      ++  +  +++  P   
Sbjct: 125 GIWSKVALGVTLVFFI----VFFNVYQGVKEVSRTVLDNGRMLGMSERQLMQHVYWPSAL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T    A   ++V E            GLG  I ++        V  G+ ++ 
Sbjct: 181 SWMFSSLHTVGSFAVVGAVVGEYLG------SAAGLGYLIQQAEGVFDVAGVFAGMFVLS 234

Query: 564 CFVLALN---------RFLWHP 576
            FV+ ++           +W P
Sbjct: 235 AFVILIDFGVTLVERRLLVWRP 256



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P         +       ++   T    + A VI  L   +     A+   +  V  P +
Sbjct: 44  PVRRASPNRKSFASGVTWKHLGITLAESILAFVIGSLSGVLIGFWFARQPLVAAVFDPYV 103

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++ ++P +       ++       KV        F +F        F++YQ +  + R 
Sbjct: 104 KMVNALPRVVLAPIFALWLGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSRT 155

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + +  R   +S  Q   ++  P ++  +  ++      G F VV +   VVG+ +    G
Sbjct: 156 VLDNGRMLGMSERQLMQHVYWPSALSWMFSSLHT---VGSFAVVGA---VVGEYLGSAAG 209

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
           +G  I  A    D+  +   M  +   + L D    L+ R ++VW
Sbjct: 210 LGYLIQQAEGVFDVAGVFAGMFVLSAFVILIDFGVTLVERRLLVW 254


>gi|293602690|ref|ZP_06685131.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818881|gb|EFF77921.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 292

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 89/242 (36%), Gaps = 10/242 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F L     +  +                        +    L   AS++   ++   + 
Sbjct: 46  LFILALLAGLWELAARYTDNDLLLPGAWQTAQAFVQGIANGELLARASQSLRVLVQGYLA 105

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F   TLA  +R    +L  +  +   +P +  L   +++F           E + 
Sbjct: 106 GVALAFALTTLAVSTRFGRDLLSTLTAMFNPLPAIALLPLALLWFGLG--------EGSL 157

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F +  S +W +  +MY     +   L    R++ L+G +    + VP ++P ++  + +
Sbjct: 158 VFVLIHSVLWALALNMYAGFLGVSETLRMAGRNYGLTGLRYVLQILVPAALPAILAGLKI 217

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L
Sbjct: 218 GWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLAAVVVIGLLVENL 275

Query: 259 LF 260
            F
Sbjct: 276 AF 277



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 15/278 (5%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG------VAIGIAWQSIGY 366
           +  L          + E   Q  + +++  +  +     +        + +  AWQ+   
Sbjct: 19  LPPLPPQAAQTPLPWQERLWQHAALRKLFILALLAGLWELAARYTDNDLLLPGAWQTAQA 78

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
            V      ++L        ++  +V   +    +   +             +     +  
Sbjct: 79  FVQGIANGELLA---RASQSLRVLVQGYLAGVALAFALTTLAVSTRFGRDLLSTLTAMFN 135

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             PA    PL +        +    L  ++I    W +  N+ AG        +    ++
Sbjct: 136 PLPAIALLPLALLWFGLGEGS----LVFVLIHSVLWALALNMYAGFLGVSETLRMAGRNY 191

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +TG R+   I++P   P  + G       AW   I +E+           GLG YI ++
Sbjct: 192 GLTGLRYVLQILVPAALPAILAGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQN 249

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +     V  G+  +    L +    +        R 
Sbjct: 250 RNELYTDRVFAGLAAVVVIGLLVENLAFDTQERLTVRR 287


>gi|307942185|ref|ZP_07657536.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307774471|gb|EFO33681.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 253

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 103/230 (44%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +  ++        L Q+   T LR+L+A  +++ +  V+  +  +++++   L 
Sbjct: 36  LPGPIVVAGLIASEAVNGPLFQHMGATLLRVLAAFTLAMSYGLVFGLVMGRAKKVDRWLD 95

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L I  ++P L  +    ++            E+AA+ A+  +++  +T  + +    +
Sbjct: 96  PWLVIFLNLPALVTIVLCYLWIGL--------TEVAAVLAVAINKIPMVTTMIREGARAL 147

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L+++++ +R+    +  ++ +P   P +  +     +  W  V+  E +   +    
Sbjct: 148 DPELDDMAQIYRMPLGARARHVLLPQLSPQIAASARTGTALIWKIVLVVEFLGRSN---- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I L  +  D+  +L   L  + V+ L + ++ +P  V +N++R
Sbjct: 204 --GIGFQIHLYFQLFDVPMVLAYSLAFVMVMLLIELVILQPWEVRANRWR 251



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 72/205 (35%), Gaps = 10/205 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+ RV+    +A    +  G+ +G    +   + P+  +    PA V   L  
Sbjct: 55  LFQHMGATLLRVLAAFTLAMSYGLVFGLVMGRAKKVDRWLDPWLVIFLNLPALVTIVLCY 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    +   L +++  I      +   +  GA A   +  ++A  + +      R+++
Sbjct: 115 LWIGLTEVAAVLAVAINKIPM----VTTMIREGARALDPELDDMAQIYRMPLGARARHVL 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + P     A T     W   +V E         R+ G+G  I    +    P V+  
Sbjct: 171 LPQLSPQIAASARTGTALIWKIVLVVEFLG------RSNGIGFQIHLYFQLFDVPMVLAY 224

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
            L     +L +   +  P  +   R
Sbjct: 225 SLAFVMVMLLIELVILQPWEVRANR 249


>gi|146306397|ref|YP_001186862.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145574598|gb|ABP84130.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 271

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL    +     D +           L  Q  + +  R+   + I+ L   V    A   
Sbjct: 44  LLPSASQMVDAIDRLAFTEDKRSGQYLFWQDTASSLQRLGMGLGIAALLGLVLGIAAGSI 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
              G  L P+L ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PLFGAPLSPLLTVLSMIPPLAILPILFIVFGLG--------ELSKVMLIAIGITPCIARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IP +L   +++   + W     L +P  +P L+ ++ + +   W F++A+E I
Sbjct: 156 IEQRAREIPGELLIKAQTLGANTWTLILRLVLPQLLPRLLISLRLMLGSAWLFLIAAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              D      G+G  I L  +   +  IL  ++ +  + +L D  L + +
Sbjct: 216 ASTD------GLGYRIFLVRRYMAMDVILPYVVWITLLAWLMDLGLRQVL 259



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 75/201 (37%), Gaps = 11/201 (5%)

Query: 378 YVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ W    + + R+ + + IA+++ + +GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWQDTASSLQRLGMGLGIAALLGLVLGIAAGSIPLFGAPLSPLLTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+  + +++ +       I  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLGELSKVMLIAIGITPC----IARDIEQRAREIPGELLIKAQTLGANTWTLILR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P  +       G AW   I +E  +       T GLG  I       +   ++
Sbjct: 185 LVLPQLLPRLLISLRLMLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYMAMDVIL 238

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
             V+ +      ++  L   L
Sbjct: 239 PYVVWITLLAWLMDLGLRQVL 259


>gi|312116233|ref|YP_004013829.1| binding-protein-dependent transporters inner membrane component
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221362|gb|ADP72730.1| binding-protein-dependent transport systems inner membrane
           component [Rhodomicrobium vannielii ATCC 17100]
          Length = 252

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 78/217 (35%), Gaps = 13/217 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++      +   +LP   + T  R +  + I +     +  L   S+    ++ 
Sbjct: 35  LPSPHAVLARGWTEVTTGTLPADLAATLSRHIQGLGIGVSAALAFGLLLGLSKLANRLIG 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+    + I +  ++    ++F         G E   I  I  +    M  S ++    I
Sbjct: 95  PLFLGFRQIALFAWVPLLSLWFG--------GNEAGKIAFIAVAAFTPMVVSTWRGTSEI 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                E++    L        + +P ++P ++     S+   W   V +E+      +  
Sbjct: 147 SPAHHELAAVLTLGRLDYVRLIALPSALPQVLTGFRSSLIASWLATVGAELF-----LNV 201

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            PG+G  +    +   +  +L  ++ ++ +  +Y +L
Sbjct: 202 APGLGGRLNEGRETFQMDLLLAMLIVLVAIGMIYQRL 238



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 62/189 (32%), Gaps = 9/189 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R +  + I     +  G+ +G     +  I P            + PL+      
Sbjct: 59  AATLSRHIQGLGIGVSAALAFGLLLGLSKLANRLIGPLFLGFRQIALFAWVPLLSLWFG- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +       ++ +   G S       E+A+   +    + R I LP   
Sbjct: 118 ---GNEAGKIAFIAVAAFTPMVVSTWRGTSEISPAHHELAAVLTLGRLDYVRLIALPSAL 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +TG  ++   +W A++ +E+           GLG  + E  E      ++  ++++ 
Sbjct: 175 PQVLTGFRSSLIASWLATVGAELFLN-----VAPGLGGRLNEGRETFQMDLLLAMLIVLV 229

Query: 564 CFVLALNRF 572
              +   R 
Sbjct: 230 AIGMIYQRL 238


>gi|120401149|ref|YP_950978.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119953967|gb|ABM10972.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
          Length = 292

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+L+ + I ++   +   +      +  VL P L  ++++P L +    V
Sbjct: 94  LWEHLYMTLRRVLAGVAIGVVLGVLLGLVMGSVSWVRSVLEPWLTFLRALPPLAYFFLLV 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+     +    +  +           L+E +R+   S  Q  
Sbjct: 154 IWLGIDEAPKITLLALAALPPAAVATTAAVVAAPVG--------LQEAARALGASRRQVI 205

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP ++P     + +++   +  VVA+E+         +PG+G  +  A    +   
Sbjct: 206 RDVVVPSALPETFTGIRLAVGMAYSSVVAAELF------NGIPGVGGLVKDASNYNNTPV 259

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +L  +  +     + D LL    R  + W  K
Sbjct: 260 VLVGIFAIGFSGLVIDGLLRAAERRAVPWRGK 291



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 106/283 (37%), Gaps = 29/283 (10%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +    R+ G  +      LS  V  +          + + F+   +    +++       
Sbjct: 25  RPGRSRWRGRVTRAALPLLSLLVFGVVWQFAAASGVWNQTFVPYPATVWGAFVDVSTTHD 84

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
            V G A  + W+ +                    +T+ RV+  + I  ++ + +G+ +G 
Sbjct: 85  GVRGYAGYLLWEHLY-------------------MTLRRVLAGVAIGVVLGVLLGLVMGS 125

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              + S ++P+   L A P   +F L+V  +          L+L  +            A
Sbjct: 126 VSWVRSVLEPWLTFLRALPPLAYFFLLVIWLGIDEAPKITLLALAALPPAAVA----TTA 181

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
              A P   +E A +   +  +  R +++P   P   TG   A G A+++ + +E+ +  
Sbjct: 182 AVVAAPVGLQEAARALGASRRQVIRDVVVPSALPETFTGIRLAVGMAYSSVVAAELFNG- 240

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  G+G  + +++   + P V++G+  +    L ++  L
Sbjct: 241 -----IPGVGGLVKDASNYNNTPVVLVGIFAIGFSGLVIDGLL 278


>gi|78060763|ref|YP_367338.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965313|gb|ABB06694.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 247

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 17/240 (7%)

Query: 19  IFDLLAFVLVIGIINILLH---GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           + + +AF  ++G+   +     G +E  +P     +         L      T   + + 
Sbjct: 4   LIETVAFWAIVGVAWEVGVRWTGAREYVLPSLSSVLAAGWEMRAQLLADTLTTAWEVFAG 63

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             +++        LA+ S  +   L+P +  +QS+P +      +V+F   +  K+  A 
Sbjct: 64  FALAVAGGLAIGLLASASNLVRRTLLPFVTALQSMPKIALAPLLIVWFGYGFASKLAAAV 123

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L A F         +  +    L  +PR L+E  R+   S    FW+L +P ++P L+  
Sbjct: 124 LFAFF--------PIVVATMGGLAGVPRHLDEHFRALGASAAHTFWHLRLPAALPALMDG 175

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++M       +  E I          G+G  I  A           A+L +  +  L+
Sbjct: 176 LKIAMPLAVIGAIVGEFIG------AEAGLGHLIVFATSNAQTPLCFAAILMVTALAMLF 229



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 17/230 (7%)

Query: 347 FWFCVVCGVAIGIAWQSIG-YIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASI 399
           FW  V     +G+ W     Y++          ++    ++     T + V     +A  
Sbjct: 10  FWAIVGVAWEVGVRWTGAREYVLPSLSSVLAAGWEMRAQLLADTLTTAWEVFAGFALAVA 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G+       +   + PF   L + P     PL++    Y   +      L     
Sbjct: 70  GGLAIGLLASASNLVRRTLLPFVTALQSMPKIALAPLLIVWFGYGFASKLAAAVLF---- 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + I+   + G +  P    E   +   +    + ++ LP   P  + G   A   A  
Sbjct: 126 AFFPIVVATMGGLAGVPRHLDEHFRALGASAAHTFWHLRLPAALPALMDGLKIAMPLAVI 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +IV E            GLG  I  +T     P     +L++    +  
Sbjct: 186 GAIVGEFIG------AEAGLGHLIVFATSNAQTPLCFAAILMVTALAMLF 229


>gi|295397201|ref|ZP_06807303.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
 gi|294974561|gb|EFG50286.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
          Length = 529

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 20/202 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ I+ +     A   +  R+    ++    I+Q+IP L       +    +  G V 
Sbjct: 44  LLALFIACVIAIPLAIWLSDHRKYAEPVLQFASILQTIPSLA---LLGLLIPLVGIGSVP 100

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 ++AI       +  + Y     I   +EE + +F +   ++ + + +P +MP +
Sbjct: 101 ALIALVVYAIL-----PILQNTYIGFVEIDPTIEEAAIAFGMPRRRRLFKVELPIAMPVV 155

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  S+         + +I  G       G+GS I L I   D    L   +    + 
Sbjct: 156 ISGIRTSLVLTIGTATLATLIGAG-------GLGSLIMLGIDRNDSNLTLIGAIASSLLA 208

Query: 253 FLYDQLLFRPMIVWSNKFRLER 274
                 +F  +I W    +++ 
Sbjct: 209 I-----IFGALIKWLENKKMKT 225



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + IA +I IP+ IW+      +  +  FA +L   P+     L++  V    +   +
Sbjct: 44  LLALFIACVIAIPLAIWLSDHRKYAEPVLQFASILQTIPSLALLGLLIPLVGIGSVPALI 103

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  I      IL N   G        +E A +F +   R    + LP   P  ++G 
Sbjct: 104 ALVVYAIL----PILQNTYIGFVEIDPTIEEAAIAFGMPRRRRLFKVELPIAMPVVISGI 159

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++ +   G       GLG+ I    ++      ++G +      +   
Sbjct: 160 RTSLVLTIGTATLATLIGAG-------GLGSLIMLGIDRNDSNLTLIGAIASSLLAIIFG 212

Query: 571 RFL 573
             +
Sbjct: 213 ALI 215


>gi|294616231|ref|ZP_06696025.1| ABC transporter, substrate-binding protein [Enterococcus faecium
           E1636]
 gi|291590913|gb|EFF22628.1| ABC transporter, substrate-binding protein [Enterococcus faecium
           E1636]
          Length = 583

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + I W+   +I+            D   ++     T+   V+ ++IAS++  
Sbjct: 13  FILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLSHSVTTLNEAVLGLVIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 90/234 (38%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +++  I    +P        +  D   L  ++  T    +  +VI+ + 
Sbjct: 11  MAFILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLSHSVTTLNEAVLGLVIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             + V  +   VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ATYCVSGA---VVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|257061579|ref|YP_003139467.1| substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. PCC 8802]
 gi|256591745|gb|ACV02632.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. PCC 8802]
          Length = 520

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 12/200 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  + Q      + +  AM  ++        + AK  +L   ++ + + +Q+IP L    
Sbjct: 10  LQEIIQRTVEHLILVSIAMGAAIAVGIPLGIIIAKQPKLADPILGVANAIQTIPSLAIFG 69

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +   +    GK+      AI A+    +  +  + Y  +  + + ++E + +  +   
Sbjct: 70  FLITVPIIGGIGKIP-----AIVALILYALLPIIRNTYTGIKQVDKGVKEAAIALGMKNR 124

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++  ++  + +S        V    I      I   G+G +I   I   +
Sbjct: 125 QILLLIEIPLALGIILAGVRVS-------TVICVGITTIAAAIGAGGLGVFIFRGISMVN 177

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
              IL   +    +    D 
Sbjct: 178 NQIILAGAIPSAIIALAADW 197



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 8/184 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + +  A  + IP+GI I  +P ++  I   A  +   P+   F  +++      +
Sbjct: 21  LILVSIAMGAAIAVGIPLGIIIAKQPKLADPILGVANAIQTIPSLAIFGFLITVPIIGGI 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +I      I+ N   G        KE A +  +   +    I +P      
Sbjct: 81  G-KIPAIVALILYALLPIIRNTYTGIKQVDKGVKEAAIALGMKNRQILLLIEIPLALGII 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       +++    +     +   GLG +I       +   ++ G +      
Sbjct: 140 LAGVRVS-------TVICVGITTIAAAIGAGGLGVFIFRGISMVNNQIILAGAIPSAIIA 192

Query: 567 LALN 570
           LA +
Sbjct: 193 LAAD 196


>gi|169832593|ref|YP_001695228.1| choline transporter [Streptococcus pneumoniae Hungary19A-6]
 gi|168995095|gb|ACA35707.1| choline transporter [Streptococcus pneumoniae Hungary19A-6]
          Length = 506

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALMIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L+ LMI+   + IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLP---ALTALMIY-AIFPIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|206579262|ref|YP_002238126.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|288935104|ref|YP_003439163.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|206568320|gb|ACI10096.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|288889813|gb|ADC58131.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 271

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 87/241 (36%), Gaps = 6/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             FL++     V+  + + W   V    I         ++    +  +  ++     T+ 
Sbjct: 13  PRFLKILYPTLVAVAVVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLTPLLLALLFTLK 72

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++  +++ +I   V   +     + + + P+   L   P     PL++  V    L+ 
Sbjct: 73  ITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDATLSL 132

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +L+      + I+ N   G  +            H + W+    + +P   PY+  
Sbjct: 133 VVCATLM----AVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIPSALPYFFG 188

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               + G +   ++V+E  +        TGL   I ++  +   P +   +L++    +A
Sbjct: 189 ALRISSGLSLIGAVVAEFVAG--TGGTNTGLAYQILQAGYQLDIPLMFAALLLISLAGIA 246

Query: 569 L 569
           L
Sbjct: 247 L 247



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L + ++S++     A +  ++R +   L P +  +Q  PI+      +++  +      
Sbjct: 74  TLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKD------ 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A L+ +       V+ +  +  Q L ++   L    R    S WQ    L +P ++P 
Sbjct: 128 --ATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIPSALPY 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM--- 248
               + +S        V +E +          G+   I  A  + D+  +  A+L +   
Sbjct: 186 FFGALRISSGLSLIGAVVAEFVAGTGGTNT--GLAYQILQAGYQLDIPLMFAALLLISLA 243

Query: 249 -LGVIFLYDQLLFRPMIVWSN 268
            + +  +   +  R +  W  
Sbjct: 244 GIALFGVMSWVSRRALSAWHE 264


>gi|168487331|ref|ZP_02711839.1| choline transporter [Streptococcus pneumoniae CDC1087-00]
 gi|183569815|gb|EDT90343.1| choline transporter [Streptococcus pneumoniae CDC1087-00]
          Length = 506

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 21/171 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAV 147

Query: 212 MIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I+   T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 148 LIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|83310963|ref|YP_421227.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82945804|dbj|BAE50668.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 255

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 12/192 (6%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +     ++      ++I S++ I +G+     P + +  +  A+LL   P   + P  + 
Sbjct: 60  LTYVVASLGHYSAGVLIGSVLGITLGVASALWPLVEASQEGIARLLRPIPPIAWIPFAII 119

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498
                        + ++  G  W   F              E+A +F      +    ++
Sbjct: 120 WFGVTEG----AAAFIIAIGVFWLNYFAANTAVKGVDRGLIELAHAFGQGSLVKRLLKVV 175

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P   +G     G  W A + +E+          +G+G  + E++   +   V+L 
Sbjct: 176 LPGAAPGLFSGLRAGLGMGWIAVLAAELFGI-------SGIGQRMMEASGVLATDIVLLY 228

Query: 559 VLIMCCFVLALN 570
           +  +       +
Sbjct: 229 MATIALLYAIFD 240



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 18/252 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           P   SR   P +F  +A  L +        L        P  +V              Y 
Sbjct: 4   PVTASRSRRPAMFAGIAVFLGLWEAAARTGLIPAILVPPPSSVVAAFQKEAGSGMWLTYV 63

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +     + ++I  +        +A    +      I  +++ IP + ++ F +++F  
Sbjct: 64  VASLGHYSAGVLIGSVLGITLGVASALWPLVEASQEGIARLLRPIPPIAWIPFAIIWFGV 123

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW-QKFWYLG 184
                    E AA F I     W   F+   ++  + R L E++ +F      ++   + 
Sbjct: 124 --------TEGAAAFIIAIGVFWLNYFAANTAVKGVDRGLIELAHAFGQGSLVKRLLKVV 175

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + PGL   +   +  GW  V+A+E+  +        GIG  +  A        +L  
Sbjct: 176 LPGAAPGLFSGLRAGLGMGWIAVLAAELFGIS-------GIGQRMMEASGVLATDIVLLY 228

Query: 245 MLTMLGVIFLYD 256
           M T+  +  ++D
Sbjct: 229 MATIALLYAIFD 240


>gi|168494224|ref|ZP_02718367.1| choline transporter [Streptococcus pneumoniae CDC3059-06]
 gi|183575807|gb|EDT96335.1| choline transporter [Streptococcus pneumoniae CDC3059-06]
          Length = 506

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 21/171 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAV 147

Query: 212 MIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I+   T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 148 LIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|154492129|ref|ZP_02031755.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC
           43184]
 gi|154087354|gb|EDN86399.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC
           43184]
          Length = 469

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 98/254 (38%), Gaps = 19/254 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I  +   +L   ++ +L+           +   +       S  Q    T LR    M I
Sbjct: 17  ILSITILILAWQLLTMLVRLPDLVPSIPHLFSTLVALFASGSFYQSVMATVLRGTIGMSI 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+     + L  K   +  +  P+L IM+SIP++ F+   +++         + AE   
Sbjct: 77  SLMAAMGVSLLFYKCEWIYELFRPLLAIMRSIPVISFILLALIF---------LNAESIP 127

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F +    +T ++ + +    ++   ++R FR+  W K   +  P   P L   +  
Sbjct: 128 LIIAFLTMFPLLTENLTKGIRGQRKEFSIMARQFRIGRWNKLTQVVYPQLKPFLYSGLAS 187

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +   GW  ++  E++         PGIG  +  A     +  ++   +  + + +L+D+ 
Sbjct: 188 ASGFGWRAIIMGEVLA-----QCSPGIGGEMKQAQVFIAVPELIAWTIIAILISYLFDRG 242

Query: 259 LFRPMIVWSNKFRL 272
           +      W  K R 
Sbjct: 243 I-----SWLAKQRF 251



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +L + W  +   V +     SI ++ +                 T+ R  + + I+ +  
Sbjct: 22  ILILAWQLLTMLVRLPDLVPSIPHLFSTLVALFASGSFYQSVMATVLRGTIGMSISLMAA 81

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + V +       I    +P   ++ + P   F  L +  +          + L++ F T 
Sbjct: 82  MGVSLLFYKCEWIYELFRPLLAIMRSIPVISFILLALIFL------NAESIPLIIAFLTM 135

Query: 462 WYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           + +L  N+  G      +F  +A  F I  W     ++ P + P+  +G  +A G  W A
Sbjct: 136 FPLLTENLTKGIRGQRKEFSIMARQFRIGRWNKLTQVVYPQLKPFLYSGLASASGFGWRA 195

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            I+ EV +       + G+G  + ++    + PE++   +I        +R
Sbjct: 196 IIMGEVLA-----QCSPGIGGEMKQAQVFIAVPELIAWTIIAILISYLFDR 241


>gi|154247140|ref|YP_001418098.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161225|gb|ABS68441.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 271

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 19/202 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+    +  II +   + VG W   +  +++   P+ ++  A P  V  P+    +  
Sbjct: 74  GVTLLETTLAFIIGAAGGVLVGFWFARKALLAAVFDPYVKMANALPRVVLAPIFALWLGL 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A    ++  +  R++  P   
Sbjct: 134 GIWSKVALGVTLVFFI----VFFNVYQGVKEVSPTLLSNARMLGMSERQLMRHVFWPSAL 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   TA G A   ++V E            GLG  I ++        V  G+L++ 
Sbjct: 190 TWMFSSLHTAVGFALVGAVVGEYLG------SAAGLGYRIHQAEGVFDVTGVFSGMLVLA 243

Query: 564 CFVLALNR---------FLWHP 576
            FV+ ++           +W P
Sbjct: 244 LFVIVIDTGVSAIENRLLVWRP 265



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 81/229 (35%), Gaps = 23/229 (10%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  + +          +  +   T L    A +I      +     A+   L  V  P
Sbjct: 51  STPLAVFERTWRDFATGVIWYHLGVTLLETTLAFIIGAAGGVLVGFWFARKALLAAVFDP 110

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +  ++P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 111 YVKMANALPRVVLAPIFALWLGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVS 162

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L   +R   +S  Q   ++  P ++  +  ++  ++    F +V +   VVG+ +   
Sbjct: 163 PTLLSNARMLGMSERQLMRHVFWPSALTWMFSSLHTAVG---FALVGA---VVGEYLGSA 216

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---------LLFRP 262
            G+G  I  A    D+  +   ML +   + + D          L++RP
Sbjct: 217 AGLGYRIHQAEGVFDVTGVFSGMLVLALFVIVIDTGVSAIENRLLVWRP 265


>gi|323693496|ref|ZP_08107703.1| hypothetical protein HMPREF9475_02566 [Clostridium symbiosum
           WAL-14673]
 gi|323502453|gb|EGB18308.1| hypothetical protein HMPREF9475_02566 [Clostridium symbiosum
           WAL-14673]
          Length = 275

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 98/240 (40%), Gaps = 15/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L ++++  I++  ++       P D++  +   +      +    ++ R+    + +  
Sbjct: 25  FLFWLILWQILSSSINNSIIFVGPADVLASLAAQITTPEFWKTIGLSSFRIFIGFLSAFF 84

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA +   L  +L P++ + +SIP+  F+   +++          G+E  ++F 
Sbjct: 85  CGIMTGCLAFRFSFLDELLAPVMLLAKSIPVASFVILALIW---------TGSENLSVFI 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            FT  +     +    L +    L E++  FR S  +K   +  P  +P L+ ++  ++ 
Sbjct: 136 AFTIVLPMSYTATLSGLKSTDEKLLEMAFVFRFSFPRKVKAVYFPALLPYLMTSVRTALG 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIFLYDQLLF 260
             +   VA+E+I V         IG  + +A    D   +  + ++ +     + +  LF
Sbjct: 196 MSFKSGVAAEVIGVPSHS-----IGEQLYIAKIYLDTAGLFSWTLVIIAVTFLIENIFLF 250



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I    +   +        +  +    T  +    I L   + FR+ +  + A    I
Sbjct: 31  LWQILSSSINNSIIFVGPADVLASLAAQITTPEFWKTIGL---SSFRIFIGFLSAFFCGI 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G        +   + P   L  + P   F  L +      +L+  +  ++++      
Sbjct: 88  MTGCLAFRFSFLDELLAPVMLLAKSIPVASFVILALIWTGSENLSVFIAFTIVLPMS--- 144

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                 ++G  +      E+A  F  +  R  + +  P + PY +T   TA G ++ + +
Sbjct: 145 --YTATLSGLKSTDEKLLEMAFVFRFSFPRKVKAVYFPALLPYLMTSVRTALGMSFKSGV 202

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +EV       + +  +G  +  +        +    L++      +    
Sbjct: 203 AAEVIG-----VPSHSIGEQLYIAKIYLDTAGLFSWTLVIIAVTFLIENIF 248


>gi|225859623|ref|YP_002741133.1| choline transporter [Streptococcus pneumoniae 70585]
 gi|225721706|gb|ACO17560.1| choline transporter [Streptococcus pneumoniae 70585]
          Length = 506

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 21/171 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAV 147

Query: 212 MIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I+   T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 148 LIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|150376081|ref|YP_001312677.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150030628|gb|ABR62744.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 259

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 90/230 (39%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +       L   +LP +   T  R++ A V +++       L  +   +   L 
Sbjct: 42  LPQPWALWTPFLQALGSGALPYHLGMTLWRVVCAFVPAMIIGVAVGFLMGRFASVDRWLD 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P L  +    ++            E AAI A+  +++ N+   + +    +
Sbjct: 102 PWLVVFLNLPALVLIVLCYIWIGLN--------ETAAITAVVLNKIPNVATLLREGTRAL 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +L+ ++  +R+    +  ++ +P   P +  +    ++  W  V+  E +        
Sbjct: 154 DPNLDSMAAVYRMRPLARLRHVIMPQLAPFIAASARAGIAVIWKIVLVVEFLG------R 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I    +  ++  +L   L+ +GV+ L + L  +P      ++R
Sbjct: 208 SSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEALFLQPAERRVRRWR 257



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 14/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +T++RVV   + A II + VG  +G    +   + P+  +    PA V   L  
Sbjct: 61  LPYHLGMTLWRVVCAFVPAMIIGVAVGFLMGRFASVDRWLDPWLVVFLNLPALVLIVLCY 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +              ++      +   +  G  A   +   +A+ + +      R++I
Sbjct: 121 IWIGL----NETAAITAVVLNKIPNVATLLREGTRALDPNLDSMAAVYRMRPLARLRHVI 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P+    A       W   +V E         R++G+G  I    +  +   V++ 
Sbjct: 177 MPQLAPFIAASARAGIAVIWKIVLVVEFLG------RSSGIGFQIHFYFQLFNVAMVLVY 230

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            L     +L +      P      R +R
Sbjct: 231 ALSFIGVMLLVEALFLQP----AERRVR 254


>gi|109898184|ref|YP_661439.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
 gi|109700465|gb|ABG40385.1| binding-protein-dependent transport systems inner membrane
           component [Pseudoalteromonas atlantica T6c]
          Length = 256

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 14/257 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
                +RR        +  V  I           +      ++  +   L    +     
Sbjct: 3   FLSQATRRWLFIRIGTVLLVGAIWQAAAWFVASPDFPSCTGVLSSIHFHLTQGDMLLNLW 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T  R+  + VIS+L   V   L     +L  +    L I  ++P L  +    ++F   
Sbjct: 63  VTLKRVAISFVISMLIGVVIGVLMGTYSKLNRLTDTALIIALNVPALVTILLCYIWFGL- 121

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   E AAI A+  +++  +   + +    +  DL  V++ +RLS  + F+ + +P
Sbjct: 122 -------VESAAIAAVVLNKIPTVVVMIREGARVVDHDLLAVAKIYRLSPRRTFFKVFLP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P ++ +    +S  W  V+  E++          G+G  +    +  D+  IL    
Sbjct: 175 QLYPFIMASARSGLSLIWKIVLVVELLG------RSDGVGFALNTQFQFFDITGILAYTC 228

Query: 247 TMLGVIFLYDQLLFRPM 263
             + +I   + ++FRP+
Sbjct: 229 AFISIILCIEAVVFRPL 245



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 13/221 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +  I  H T  D+L  +W   +T+ RV +  +I+ +I + +G+ +G    ++       
Sbjct: 44  VLSSIHFHLTQGDMLLNLW---VTLKRVAISFVISMLIGVVIGVLMGTYSKLNRLTDTAL 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +    PA V   L                   ++      ++  +  GA    +D   V
Sbjct: 101 IIALNVPALVTILLCYIWFGLV----ESAAIAAVVLNKIPTVVVMIREGARVVDHDLLAV 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A  + ++  R +  + LP ++P+ +  A +     W   +V E+        R+ G+G  
Sbjct: 157 AKIYRLSPRRTFFKVFLPQLYPFIMASARSGLSLIWKIVLVVELLG------RSDGVGFA 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
           +    +      ++         +L +   ++ PL     R
Sbjct: 211 LNTQFQFFDITGILAYTCAFISIILCIEAVVFRPLDRLIAR 251


>gi|317130019|ref|YP_004096301.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315474967|gb|ADU31570.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 268

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 87/217 (40%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  + ++    +   SL  + S T    ++  ++  +   + A +   S  L  VL P
Sbjct: 53  SSPTRVWELFVSRVQDGSLFMHTSVTLFETIAGFLLGTVLGTMMAAILWWSPFLSRVLDP 112

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ S+P +      +V F   +   +    L ++           T  +Y +   + 
Sbjct: 113 YLVILNSMPKVALGPILIVAFGTGFTSIIAMGALISVVI--------TTLVVYNAFKGVD 164

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V +SF  +  Q F+ +  P S P ++  + +++   W  V+  E +V        
Sbjct: 165 ENYLKVIQSFGATKKQSFFSVIFPASYPTIISTLKVNVGLAWVGVIVGEFLV------SK 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   ++ +++ +  +  +  QL+
Sbjct: 219 QGLGYMIVYGFQVFNFTLVMLSLIIIAILATIMYQLV 255



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+F  +   ++ +++   +   + + P +S  + P+  +L + P     P+
Sbjct: 69  GSLFMHTSVTLFETIAGFLLGTVLGTMMAAILWWSPFLSRVLDPYLVILNSMPKVALGPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++        +     +L+ +  T   +++N   G      ++ +V  SF  T  + +  
Sbjct: 129 LIVAFGTGFTSIIAMGALISVVITT-LVVYNAFKGV---DENYLKVIQSFGATKKQSFFS 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P  +P  ++      G AW   IV E        +   GLG  I    +  +F  V+
Sbjct: 185 VIFPASYPTIISTLKVNVGLAWVGVIVGEFL------VSKQGLGYMIVYGFQVFNFTLVM 238

Query: 557 LG 558
           L 
Sbjct: 239 LS 240


>gi|78046436|ref|YP_362611.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034866|emb|CAJ22511.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 294

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   LAA +R    VL 
Sbjct: 71  LPGAVQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRCGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L VP ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 241 QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVR 288



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 86/271 (31%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L       R+H P    +      +    +I    V   + +  A Q+     +    
Sbjct: 28  PALGAATTPTRWHAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAVQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRCGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAIERLTVRR 289


>gi|148998724|ref|ZP_01826162.1| choline transporter [Streptococcus pneumoniae SP11-BS70]
 gi|307068475|ref|YP_003877441.1| ABC transporter periplasmic glycine betaine/choline-binding
           (lipo)protein [Streptococcus pneumoniae AP200]
 gi|147755418|gb|EDK62467.1| choline transporter [Streptococcus pneumoniae SP11-BS70]
 gi|306410012|gb|ADM85439.1| periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system [Streptococcus pneumoniae
           AP200]
          Length = 506

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 21/171 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAV 147

Query: 212 MIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I+   T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 148 LIIGTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|315223172|ref|ZP_07865033.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus anginosus
           F0211]
 gi|315187604|gb|EFU21358.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Streptococcus anginosus
           F0211]
          Length = 510

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 65/186 (34%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +++++L+         +  +    V++ I++I+ +IP +  L   +             
Sbjct: 28  LSILLALILGVGLGIFISFKKSWAGVVIGIVNILYTIPSIALLGILISITGIGN------ 81

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+    +  M  S Y  +  +   L E +     +  Q    + +P + P ++
Sbjct: 82  --KTAIVALTLYALLPMVRSTYTGITGVDPLLVEAAEGMGSTRKQILTKVQLPLAFPVMM 139

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                        V  +  +    + +   G+G  I   I   +    L   + +  +  
Sbjct: 140 SGFR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNQTLTLVGSILVALLAL 192

Query: 254 LYDQLL 259
           ++D LL
Sbjct: 193 VFDFLL 198



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 11/182 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + I++A I+ + +GI+I F+   +  +     +L   P+     +++S     +    + 
Sbjct: 28  LSILLALILGVGLGIFISFKKSWAGVVIGIVNILYTIPSIALLGILISITGIGNKTAIVA 87

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L+L  +      ++ +   G +       E A     T  +    + LP  FP  ++G  
Sbjct: 88  LTLYALL----PMVRSTYTGITGVDPLLVEAAEGMGSTRKQILTKVQLPLAFPVMMSGFR 143

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                  N   ++   +     +   GLG  I       +    ++G +++    L  + 
Sbjct: 144 -------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNQTLTLVGSILVALLALVFDF 196

Query: 572 FL 573
            L
Sbjct: 197 LL 198


>gi|268680177|ref|YP_003304608.1| binding-protein-dependent transporters inner membrane component
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618208|gb|ACZ12573.1| binding-protein-dependent transport systems inner membrane
           component [Sulfurospirillum deleyianum DSM 6946]
          Length = 260

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 91/260 (35%), Gaps = 10/260 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R L  +   FP        +    ++    W          +         +  T     
Sbjct: 2   RFLLKVIKDFPWFLWSGWGSIASIFLFLALWEFGFQTYGELVLPSPKVVFESMGTLFSDA 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                  +T+ R ++   ++ ++   +G+  G+    S   +P   +L   P   +  L 
Sbjct: 62  SFHTDLYLTIKRGLIGFGVSLVVGTFLGLLAGYFITASVMSRPIVTILVGIPPIAWIVLA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +       +     +   +I  +   +    + G+     D KE+  SFHI  ++  R +
Sbjct: 122 MIWFGLGDMT----VMFTVIIASFPIVFVGALQGSRTIEGDLKEMMESFHIGFFQKVRDL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P +F Y     ++A G +W   I++E+ S       + G+GA +A +      P  + 
Sbjct: 178 YFPHLFSYLFPSWVSALGMSWKIVIMAELLS------SSDGIGASLAIARSHLDTPLALA 231

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            V ++   +  +   +  P+
Sbjct: 232 LVSVIIGVLFFVEYIILEPM 251



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L +       +G      P+ + + +       S       T  R L    +SL+ 
Sbjct: 25  IFLFLALWEFGFQTYGELVLPSPKVVFESMGTLFSDASFHTDLYLTIKRGLIGFGVSLVV 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LA       ++  PI+ I+  IP + ++   +++F           ++  +F +
Sbjct: 85  GTFLGLLAGYFITASVMSRPIVTILVGIPPIAWIVLAMIWFGLG--------DMTVMFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +     Q    I  DL+E+  SF +  +QK   L  P     L  + + ++  
Sbjct: 137 IIASFPIVFVGALQGSRTIEGDLKEMMESFHIGFFQKVRDLYFPHLFSYLFPSWVSALGM 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  V+ +E++   D      GIG+ +A+A    D    L  +  ++GV+F  + ++  P
Sbjct: 197 SWKIVIMAELLSSSD------GIGASLAIARSHLDTPLALALVSVIIGVLFFVEYIILEP 250

Query: 263 MIVWSNKFR 271
           M      +R
Sbjct: 251 MKREIESWR 259


>gi|228991262|ref|ZP_04151220.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           pseudomycoides DSM 12442]
 gi|228997361|ref|ZP_04156983.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides
           Rock3-17]
 gi|229004992|ref|ZP_04162719.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides
           Rock1-4]
 gi|228756340|gb|EEM05658.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides
           Rock1-4]
 gi|228762453|gb|EEM11378.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus mycoides
           Rock3-17]
 gi|228768486|gb|EEM17091.1| Glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Bacillus
           pseudomycoides DSM 12442]
          Length = 503

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 76/201 (37%), Gaps = 20/201 (9%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           L ++  +++       L  +  R+   ++    +MQ+IP        
Sbjct: 14  ELLSALIEHLQISLISLFFAVMIAVPLGILLTRRERIAEFIIGTSAVMQTIPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ AI A+    +  +  + Y  +  +   L E +R+  ++ +++
Sbjct: 67  -LALLGLLIPLVGIGKVPAIIALVVYALLPILRNTYTGIRKLDASLIEAARAMGMNSFRR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P ++  +  +M           +++VG   +    IG+     +    + 
Sbjct: 126 LWRVELPLALPIIMAGIRTAM-----------VLIVGTATLAAL-IGAGGLGKLILLGID 173

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
              +A++ +  V      L F
Sbjct: 174 RNDHALIVLGAVPAALLALFF 194



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +  A +I +P+GI +  R  I+  I   + ++   P+     L++  V        +
Sbjct: 27  LISLFFAVMIAVPLGILLTRRERIAEFIIGTSAVMQTIPSLALLGLLIPLVGIG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         E A +  +  +R    + LP   P  + G 
Sbjct: 83  PAIIALVVYALLPILRNTYTGIRKLDASLIEAARAMGMNSFRRLWRVELPLALPIIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     +VLG +      L  +
Sbjct: 143 RTAMVLIVGTATLAALIGAGGLGKLIL-------LGIDRNDHALIVLGAVPAALLALFFD 195

Query: 571 RFL 573
             L
Sbjct: 196 GVL 198


>gi|15901688|ref|NP_346292.1| choline transporter [Streptococcus pneumoniae TIGR4]
 gi|111658202|ref|ZP_01408897.1| hypothetical protein SpneT_02000636 [Streptococcus pneumoniae
           TIGR4]
 gi|5579396|gb|AAD45530.1|AF162656_1 choline transporter [Streptococcus pneumoniae]
 gi|14973362|gb|AAK75932.1| choline transporter [Streptococcus pneumoniae TIGR4]
          Length = 506

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|239834709|ref|ZP_04683037.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822772|gb|EEQ94341.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 282

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    +     + +   IT+   ++   I +I  + +G W   +P +++   P+ +   +
Sbjct: 68  VRISKWFAEGTIWYHLGITLLEAMLAFAIGAIGGVLIGFWFARKPLLAAIFDPYVKAANS 127

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 128 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLANARMLG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP    +  +   TA G A   ++V E          + GLG  I ++ 
Sbjct: 184 MNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLG------SSAGLGYLIHQAE 237

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G+L++  FVL ++           +W P
Sbjct: 238 GVFDVTGVFAGMLVLTAFVLVIDWGVSIIEARLLVWRP 275



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+   +       ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 61  ATPGDVAVRISKWFAEGTIWYHLGITLLEAMLAFAIGAIGGVLIGFWFARKPLLAAIFDP 120

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 121 YVKAANSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 172

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   ++  Q    + +P ++  +  ++  ++       V  E +         
Sbjct: 173 QTVLANARMLGMNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSA----- 227

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   ML +   + + D    ++   ++VW  K
Sbjct: 228 -GLGYLIHQAEGVFDVTGVFAGMLVLTAFVLVIDWGVSIIEARLLVWRPK 276


>gi|150015506|ref|YP_001307760.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149901971|gb|ABR32804.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 311

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R    ++ A +I + VG        I    +P  ++ +        P+ ++      
Sbjct: 68  TLWRFTFGLLSAVLIGVAVGSIFAKYNDIYLMFEPLIRIFSKVNPFSLIPVFIAFFGTGE 127

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     +  + +F     IL   + G      D  +   + +I+ +     + +      
Sbjct: 128 MVRLAAIIWVGVF----PILLGTLNGIKQIDKDLIKNVKAMNISLFDIIFKVYIQASAHS 183

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE-STEKGSFPEVVLGVLIMCC 564
              G   +    +   IV E+          +GLG  +   +      P+V    +I+  
Sbjct: 184 IFAGIRISVQMTFFIIIVGEMLG------VNSGLGYLLHNGAHHYFDAPKVYASCVIIII 237

Query: 565 FVLALNRFL 573
             + +NRF 
Sbjct: 238 LGVIINRFF 246



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 14/184 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T  R    ++ ++L      ++ AK   + ++  P++ I   +     +   +
Sbjct: 61  LYMHIMSTLWRFTFGLLSAVLIGVAVGSIFAKYNDIYLMFEPLIRIFSKVNPFSLIPVFI 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +F           E+  + AI    V+ +       +  I +DL +  ++  +S +   
Sbjct: 121 AFFGTG--------EMVRLAAIIWVGVFPILLGTLNGIKQIDKDLIKNVKAMNISLFDII 172

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +  S   +   + +S+   +F ++  EM+ V        G+G  +           
Sbjct: 173 FKVYIQASAHSIFAGIRISVQMTFFIIIVGEMLGVNS------GLGYLLHNGAHHYFDAP 226

Query: 241 ILYA 244
            +YA
Sbjct: 227 KVYA 230


>gi|300870088|ref|YP_003784959.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira pilosicoli 95/1000]
 gi|300687787|gb|ADK30458.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira pilosicoli 95/1000]
          Length = 241

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 9/195 (4%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++ F+ +   I++ ++          I   +   +           T +R++   V+S 
Sbjct: 11  GIILFIAIWSFISLKINSEIIFPSIDKIFLDLINIISQKDFYSNLLYTFIRVIVTFVLSF 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L       +A   + +  +L+PI++ +++IP +  +   V++F N      I   L  IF
Sbjct: 71  LLAITLGIIAGIFKSVRYILMPIINFIRTIPTIPLILIAVLWFNNNLVP--IFVSLFVIF 128

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I    V N        + NI ++L E+S S+ +S   +   L +P   P ++ ++  SM
Sbjct: 129 PIIYDAVVN-------GIINIDKNLIEMSNSYNVSFKNQLITLYIPSIKPYILTSISQSM 181

Query: 201 SGGWFFVVASEMIVV 215
              W  V+ASE+I +
Sbjct: 182 GMTWKSVLASEIITL 196



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 69/175 (39%), Gaps = 12/175 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T  RV+V  +++ ++ I +GI  G    +   + P    +   P      + V     
Sbjct: 56  LYTFIRVIVTFVLSFLLAITLGIIAGIFKSVRYILMPIINFIRTIPTIPLILIAVLWF-- 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                N  + + +     + I++  V+ G      +  E+++S++++       + +P I
Sbjct: 114 ----NNNLVPIFVSLFVIFPIIYDAVVNGIINIDKNLIEMSNSYNVSFKNQLITLYIPSI 169

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            PY +T    + G  W + + SE+       L T GLG  + ES    +   +  
Sbjct: 170 KPYILTSISQSMGMTWKSVLASEII-----TLPTLGLGTKLYESHLYLNTVSLFA 219


>gi|158425519|ref|YP_001526811.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158332408|dbj|BAF89893.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 257

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 92/230 (40%), Gaps = 15/230 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR   +   ++ F ++     ++ H I+E  +PR    +  + L   ++  +  +T    
Sbjct: 6   RRRLSSTAVIIGFFVLWEAACVIFH-IKEIVLPRPSQVLATLWLQAPAIWPHTVQTLYTT 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    + ++   +   +   SR       P+L    SIP +  +   V++F         
Sbjct: 65  LIGFALGIVSGVLLGVVIGSSRLAYDTGYPLLIGFSSIPKVAVVPIFVLWFGAG------ 118

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + A+       ++ +  ++   L     +LE+V ++ R +     + +G+P +MP  
Sbjct: 119 --TVPAVLTAMIMSLFPIVVNVATGLATTEPELEDVMKALRATKLDILFNVGLPRAMPYF 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             ++ +S++  +   V +E +          GIG+ + +A    D+  + 
Sbjct: 177 FASLKVSVTLAFVGTVIAETVASN------RGIGNLMMIASSSFDVPLVF 220



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 70/225 (31%), Gaps = 10/225 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            +  S+  V     + W        I          V    +     +      T++  +
Sbjct: 6   RRRLSSTAVIIGFFVLWEAACVIFHIKEIVLPRPSQVLATLWLQAPAIWPHTVQTLYTTL 65

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   +  +  + +G+ IG          P     ++ P     P+ V           + 
Sbjct: 66  IGFALGIVSGVLLGVVIGSSRLAYDTGYPLLIGFSSIPKVAVVPIFVLWFGAG----TVP 121

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L  +  + + I+ NV  G +    + ++V  +   T       + LP   PY+     
Sbjct: 122 AVLTAMIMSLFPIVVNVATGLATTEPELEDVMKALRATKLDILFNVGLPRAMPYFFASLK 181

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +   A+  ++++E  +         G+G  +  ++     P V 
Sbjct: 182 VSVTLAFVGTVIAETVA------SNRGIGNLMMIASSSFDVPLVF 220


>gi|332306215|ref|YP_004434066.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173544|gb|AEE22798.1| binding-protein-dependent transport systems inner membrane
           component [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 283

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 93/237 (39%), Gaps = 15/237 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           ++   +  L+    +      ++  +   +    +      T  R+  + VIS+L   + 
Sbjct: 51  IIWQAVAWLV-ASPDFPSCIAVLSSIHFHITQGEMLLNLWVTLKRVAVSFVISMLLGVLI 109

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             L     R   +    L I  ++P L  +    ++F           E AAI A+  ++
Sbjct: 110 GVLMGTYTRFNKLTDTALIIALNVPALVTILLCYIWFGL--------VESAAIAAVVLNK 161

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V  +   + +    +  DL  V++ +RLS W+ F  + +P   P ++ +    +S  W  
Sbjct: 162 VPTVVVMIREGARVVDSDLLAVAKVYRLSPWRTFLKVFLPQLYPFIMASARSGLSLIWKI 221

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           V+  E++          G+G  +    +  D+  IL      + +I   + ++FRP+
Sbjct: 222 VLVVELLG------RSDGVGFALNTQFQYFDITGILAYTCAFISIILCVEAVVFRPI 272



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 94/278 (33%), Gaps = 10/278 (3%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           F+  S   + L   +  +     E    L +       + I W  V   VA       I 
Sbjct: 11  FASKSVMKRLLFARVLPVSLVTHEATRWLLARLANLLAVGIIWQAVAWLVASPDFPSCIA 70

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            + +   +     ++    +T+ RV V  +I+ ++ + +G+ +G     +        + 
Sbjct: 71  VLSSIHFHITQGEMLLNLWVTLKRVAVSFVISMLLGVLIGVLMGTYTRFNKLTDTALIIA 130

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              PA V   L                   ++      ++  +  GA    +D   VA  
Sbjct: 131 LNVPALVTILLCYIWFGLV----ESAAIAAVVLNKVPTVVVMIREGARVVDSDLLAVAKV 186

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           + ++ WR +  + LP ++P+ +  A +     W   +V E+        R+ G+G  +  
Sbjct: 187 YRLSPWRTFLKVFLPQLYPFIMASARSGLSLIWKIVLVVELLG------RSDGVGFALNT 240

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +      ++         +L +   ++ P+     R
Sbjct: 241 QFQYFDITGILAYTCAFISIILCVEAVVFRPIDKLIAR 278


>gi|225575132|ref|ZP_03783742.1| hypothetical protein RUMHYD_03221 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037691|gb|EEG47937.1| hypothetical protein RUMHYD_03221 [Blautia hydrogenotrophica DSM
           10507]
          Length = 261

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 86/257 (33%), Gaps = 26/257 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----------------DV 376
           Q+   Q+  + L  +   ++  + I + W S   +                         
Sbjct: 3   QISRKQKSIHNLLYWGLPILAVLLIIVGWVSFSGVHPELMPAPQEVGARFVKTFTKPIAK 62

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           + +I     ++ RV++ +++A    I  GI IG+     +      +++   P   + P+
Sbjct: 63  VTLIGHAWASLRRVLLALLVAWAFGILFGILIGWNRKARAFFGSIFEVIRPIPPIAWIPI 122

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++               LL+  GT   ++ N  AG          V   F     +  + 
Sbjct: 123 IIMWFGIG----EFPKVLLVFIGTFVPLVINTSAGIEMVDRINIHVGKIFGGNNRQILKD 178

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P    G  T+    W   + +E+           GLG+ +    +      V+
Sbjct: 179 IVIPTALPSIFAGIRTSVSSGWTTVLAAEMLG------AKEGLGSLVTRGWQGSDLALVL 232

Query: 557 LGVLIMCCFVLALNRFL 573
           + V+ +      L+  L
Sbjct: 233 VSVITIAIIGALLSVIL 249



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 103/242 (42%), Gaps = 18/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDI----VDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           L   ++++G ++      +    P+++    V      +   +L  +A  +  R+L A++
Sbjct: 22  LAVLLIIVGWVSFSGVHPELMPAPQEVGARFVKTFTKPIAKVTLIGHAWASLRRVLLALL 81

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++  F  ++  L   +R+       I ++++ IP + ++   +++F           E  
Sbjct: 82  VAWAFGILFGILIGWNRKARAFFGSIFEVIRPIPPIAWIPIIIMWFGIG--------EFP 133

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +  +F      +  +    +  + R    V + F  +  Q    + +P ++P +   + 
Sbjct: 134 KVLLVFIGTFVPLVINTSAGIEMVDRINIHVGKIFGGNNRQILKDIVIPTALPSIFAGIR 193

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            S+S GW  V+A+EM+   +      G+GS +    +  DL  +L +++T+  +  L   
Sbjct: 194 TSVSSGWTTVLAAEMLGAKE------GLGSLVTRGWQGSDLALVLVSVITIAIIGALLSV 247

Query: 258 LL 259
           +L
Sbjct: 248 IL 249


>gi|187926633|ref|YP_001892978.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|241666145|ref|YP_002984504.1| binding-protein-dependent transporters inner membrane component
           [Ralstonia pickettii 12D]
 gi|187728387|gb|ACD29551.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12J]
 gi|240868172|gb|ACS65832.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia pickettii 12D]
          Length = 345

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 72/206 (34%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               +D   +      T+  + +  ++ ++    VG+ IG+   +   + P  ++L   P
Sbjct: 135 EVYSEDWPRLGDSVLNTLKLLGIGYLLGALTGFLVGVSIGWSRAVGYWVHPVLRILGPLP 194

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    P+        +      ++L   F     +     +G +     + +VA +   +
Sbjct: 195 ATALLPITFYFFPSSYSAAAFLIALAAGF----PVAVLTWSGVAGVSKSYYDVARTLGAS 250

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +P   P    G     G ++   + +E+          +GLG Y+  +   
Sbjct: 251 NAFLVLRVAIPAALPQVFVGLFMGLGASFTVLVTAEMMG------VKSGLGWYLTWAQGW 304

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            S+  +   +++M     ++   L+ 
Sbjct: 305 ASYVNMYAALIVMALLFSSIITLLFK 330



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 88/243 (36%), Gaps = 17/243 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI---TLDVHSLPQYASRTTLRMLSAMVI 78
           L+A   V+ +  +L         P        I   + D   L      T   +    ++
Sbjct: 102 LIAVPAVLALWEVLTAKSGALPTPFFAPPQALIEVYSEDWPRLGDSVLNTLKLLGIGYLL 161

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SR +G  + P+L I+  +P    L  T  +F + Y        LAA
Sbjct: 162 GALTGFLVGVSIGWSRAVGYWVHPVLRILGPLPATALLPITFYFFPSSYSAAAFLIALAA 221

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +            +  +  + +   +V+R+   S       + +P ++P +   + M
Sbjct: 222 GFPVAVL--------TWSGVAGVSKSYYDVARTLGASNAFLVLRVAIPAALPQVFVGLFM 273

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +V +EM+ V        G+G Y+  A      + +  A++ M  +      L
Sbjct: 274 GLGASFTVLVTAEMMGVKS------GLGWYLTWAQGWASYVNMYAALIVMALLFSSIITL 327

Query: 259 LFR 261
           LF+
Sbjct: 328 LFK 330


>gi|220921065|ref|YP_002496366.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219945671|gb|ACL56063.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 266

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 22/223 (9%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +       T  ++   +W   IT+   V+  +  ++  I  G        +++   P+ 
Sbjct: 50  VLKRTWAEMTNPEIWSHLW---ITLQETVLAFVFGALGGIAFGFLFARNALLAAVFDPYI 106

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           +   A P  V  P+          +       L+ F     + FNV  G           
Sbjct: 107 KAANALPRVVLAPIFALWFGLGIWSKVALGFTLVFFI----VFFNVYQGVREVSPVVLNN 162

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    +      R++  P    +  +   TA G A   ++V E          + GLG  
Sbjct: 163 ARMLGMNECGLLRHVYWPSALTWMFSSLHTAVGFALVGAVVGEYLG------SSAGLGYK 216

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNR---------FLWHP 576
           I E+        V  G+LI+  FV+ ++           +W P
Sbjct: 217 IHEAESVFDVTGVFAGMLILTVFVIVIDAVVTLIENRLLVWRP 259



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 91/266 (34%), Gaps = 31/266 (11%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQET--------------TVPRDIVDIVPITLDVHSLPQ 63
           N   LLA  +++G+  + +  +                 + P D++      +    +  
Sbjct: 6   NRLGLLALQILVGLAILAVWHVLTVYPILGQPRQIQFFFSTPVDVLKRTWAEMTNPEIWS 65

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + A V   L    +  L A++  L  V  P +    ++P +       ++F
Sbjct: 66  HLWITLQETVLAFVFGALGGIAFGFLFARNALLAAVFDPYIKAANALPRVVLAPIFALWF 125

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV        F +F        F++YQ +  +   +   +R   ++      ++
Sbjct: 126 GLGIWSKVALGFTLVFFIVF--------FNVYQGVREVSPVVLNNARMLGMNECGLLRHV 177

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++  +  ++  ++       V  E +          G+G  I  A    D+  +  
Sbjct: 178 YWPSALTWMFSSLHTAVGFALVGAVVGEYLGSSA------GLGYKIHEAESVFDVTGVFA 231

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVW 266
            ML +   + + D    L+   ++VW
Sbjct: 232 GMLILTVFVIVIDAVVTLIENRLLVW 257


>gi|86748247|ref|YP_484743.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86571275|gb|ABD05832.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 294

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 91/248 (36%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+          ++L            +  +        L      +   +L+  VI  +
Sbjct: 51  LVLLAAAWQGYAMVLQNDLLLPSFWASLTALYDAFVHGPLLWRMLYSIQVLLTGYVIGAV 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V  +LA  ++    +L  +  ++  +P +  L   +++F               +F 
Sbjct: 111 LAGVLVSLAVSTQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSM--------VFV 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S +W +  +      ++   L     +F L   +  + + VP + P ++  + +  +
Sbjct: 163 IVHSVLWAVALNAQTGFQSVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWA 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     GIG +I       +   +   +LT++ +  L D L+FR
Sbjct: 223 FAWRTLIAAELVFGATS--RSGGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFR 280

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 281 AIERRTVR 288



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++W    ++  ++   +I +++   +          S  +     +L   PA    PL +
Sbjct: 90  LLWRMLYSIQVLLTGYVIGAVLAGVLVSLAVSTQWGSDLLATLTAMLNPLPAIALLPLAL 149

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +    +  +++    W +  N   G  +     +    +F +   R+   I+
Sbjct: 150 LWFGLGMSS----MVFVIVHSVLWAVALNAQTGFQSVSETLRMAGHNFGLRNMRYIFGIL 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P  FP  + G       AW   I +E+        R+ G+G +I E+        V  G
Sbjct: 206 VPAAFPSILNGLKIGWAFAWRTLIAAELVFGA--TSRSGGIGWFIFENRNSLETANVFAG 263

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L +    L ++  ++  +     R 
Sbjct: 264 LLTVIVIGLLVDGLIFRAIERRTVRR 289


>gi|152970590|ref|YP_001335699.1| putative ABC transporter, ATP-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|330015325|ref|ZP_08308142.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955439|gb|ABR77469.1| putative ABC transporter, ATP-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|328531810|gb|EGF58635.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 271

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 89/252 (35%), Gaps = 6/252 (2%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           +      +     FL++     V+  + + W   V    I         ++    +  + 
Sbjct: 2   KNTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLT 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T+   ++  +++ +I   V   +     + + + P+   L   P     PL+
Sbjct: 62  PLLLALLFTLKITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLI 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V    L+  +  +L+      + I+ N   G  +            H + W+    +
Sbjct: 122 IIWVKDATLSLVVCATLM----AVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY+      + G +   ++V+E  +        TGL   I ++  +   P +  
Sbjct: 178 RIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGTNTGLAYQILQAGYQLDIPLMFA 235

Query: 558 GVLIMCCFVLAL 569
            +L++    +AL
Sbjct: 236 ALLLISLAGIAL 247



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L + ++S++     A +  ++R +   L P +  +Q  PI+      +++  +      
Sbjct: 74  TLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKD------ 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A L+ +       V+ +  +  Q L ++   L    R    S WQ    L +P ++P 
Sbjct: 128 --ATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIPSALPY 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM--- 248
               + +S        V +E +          G+   I  A  + D+  +  A+L +   
Sbjct: 186 FFGALRISSGLSLIGAVVAEFVAGTGGTNT--GLAYQILQAGYQLDIPLMFAALLLISLA 243

Query: 249 -LGVIFLYDQLLFRPMIVWSN 268
            + +  +   +  R +  W  
Sbjct: 244 GIALFGVMSWVSRRALSAWHE 264


>gi|333001231|gb|EGK20799.1| putative aliphatic sulfonates transport permease protein ssuC
           [Shigella flexneri VA-6]
          Length = 215

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 10/140 (7%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PLV+                L+  GT + I  N   G         E+A S+ ++G
Sbjct: 62  LALIPLVILWFGI----DESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSG 117

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              + ++ILP   P  + G   A G  W   IV+E  S        +G+G     + E  
Sbjct: 118 IPLFIHVILPDALPSIMVGVRFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFL 171

Query: 551 SFPEVVLGVLIMCCFVLALN 570
               VV+ +++        +
Sbjct: 172 QTDVVVVAIILYALLGKLAD 191



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 17/167 (10%)

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   +++F           E A IF +    ++ +  + +  + NI R L E++RS+
Sbjct: 62  LALIPLVILWFGID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSY 113

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            LSG   F ++ +P ++P ++  +  ++   W  ++ +E I          GIG     A
Sbjct: 114 GLSGIPLFIHVILPDALPSIMVGVRFALGLMWLTLIVAETISANS------GIGYLAMNA 167

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
            +      ++ A++    +  L D   QLL R  + W+  + L+  T
Sbjct: 168 REFLQTDVVVVAIILYALLGKLADVSAQLLERLWLSWNPAYHLKEAT 214


>gi|309782774|ref|ZP_07677495.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia sp. 5_7_47FAA]
 gi|308918552|gb|EFP64228.1| binding-protein-dependent transport systems inner membrane
           component [Ralstonia sp. 5_7_47FAA]
          Length = 345

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 72/206 (34%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               +D   +      T+  + +  ++ ++    VG+ IG+   +   + P  ++L   P
Sbjct: 135 EVYSEDWPRLGDSVLNTLKLLGIGYLLGALTGFLVGVSIGWSRAVGYWVHPVLRILGPLP 194

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    P+        +      ++L   F     +     +G +     + +VA +   +
Sbjct: 195 ATALLPITFYFFPSSYSAAAFLIALAAGF----PVAVLTWSGVAGVSKSYYDVARTLGAS 250

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +P   P    G     G ++   + +E+          +GLG Y+  +   
Sbjct: 251 NAFLVLRVAIPAALPQVFVGLFMGLGASFTVLVTAEMMG------VKSGLGWYLTWAQGW 304

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            S+  +   +++M     ++   L+ 
Sbjct: 305 ASYVNMYAALIVMALLFSSIITLLFK 330



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 17/243 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI---TLDVHSLPQYASRTTLRMLSAMVI 78
           L+A  +V+ +  +L         P        I   + D   L      T   +    ++
Sbjct: 102 LIAVPVVLALWEVLTAKSGALPTPFFAPPQALIEVYSEDWPRLGDSVLNTLKLLGIGYLL 161

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SR +G  + P+L I+  +P    L  T  +F + Y        LAA
Sbjct: 162 GALTGFLVGVSIGWSRAVGYWVHPVLRILGPLPATALLPITFYFFPSSYSAAAFLIALAA 221

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +            +  +  + +   +V+R+   S       + +P ++P +   + M
Sbjct: 222 GFPVAVL--------TWSGVAGVSKSYYDVARTLGASNAFLVLRVAIPAALPQVFVGLFM 273

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   +  +V +EM+ V        G+G Y+  A      + +  A++ M  +      L
Sbjct: 274 GLGASFTVLVTAEMMGVKS------GLGWYLTWAQGWASYVNMYAALIVMALLFSSIITL 327

Query: 259 LFR 261
           LF+
Sbjct: 328 LFK 330


>gi|254439788|ref|ZP_05053282.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198255234|gb|EDY79548.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 289

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V     +D   +     +T+   ++ + +A +  + + +       +     P A +L 
Sbjct: 69  LVFETLIKDWAMLFAALLVTLQITLMALAVAVLGGVGLAVLFTQSRWMEMSFYPIAVILQ 128

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL+   V     +    L L       + +L N   G ++  +  +++   +
Sbjct: 129 VTPIVAIAPLIFIYV----DSRMAGLLLCAWLVAFFPVLSNTTLGLNSADHGLRDLFRIY 184

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+  R++ LP   PY++ G   A G +   ++V+E  +        +GL   I E+
Sbjct: 185 GATRWQKLRFLQLPSALPYFLGGLRIAGGLSLIGAVVAEYVAG--TGGIGSGLAFRILEA 242

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             + + P +   ++++    + +
Sbjct: 243 GYRLNIPRMFAALILIAVSGVVI 265



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 94/242 (38%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
             + L   ++++G++     ++ + I    +P   +    +  D   L      T    L
Sbjct: 34  GKWVLPVVMMILGLMLWDRVVVWNEIPHYILPGPALVFETLIKDWAMLFAALLVTLQITL 93

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ +++L     A L  +SR + M   PI  I+Q  PI+       +Y  +   G ++ 
Sbjct: 94  MALAVAVLGGVGLAVLFTQSRWMEMSFYPIAVILQVTPIVAIAPLIFIYVDSRMAGLLLC 153

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L A F + +        +    L +    L ++ R +  + WQK  +L +P ++P  +
Sbjct: 154 AWLVAFFPVLS--------NTTLGLNSADHGLRDLFRIYGATRWQKLRFLQLPSALPYFL 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++        V +E +     +    G+   I  A    ++  +  A++ +     
Sbjct: 206 GGLRIAGGLSLIGAVVAEYVAGTGGIGS--GLAFRILEAGYRLNIPRMFAALILIAVSGV 263

Query: 254 LY 255
           + 
Sbjct: 264 VI 265


>gi|170690210|ref|ZP_02881377.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170144645|gb|EDT12806.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 282

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 84/249 (33%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                      ++  +   V  ++   W        + +      + +      D   + 
Sbjct: 20  PRRPLLQRPGAMKALAPWVVGVLMLSMWEAACAVFDVPVYLVPAPHDIARQLVVDAPMLF 79

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T+   ++   +A+++ + + +     P I +   P+A LL   P     PL++  
Sbjct: 80  AALFATLRITLLAFALATVLGVAIALVFAQSPLIEASFFPYAILLQVTPIVAIAPLIIIW 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V     +    L +       + I+ N   G  +       +      T W+    + +P
Sbjct: 140 VK----DTTFALVICATLVALFPIISNTALGLRSVNPGLVNLFRINRATRWQTLTRLRVP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY+  G   + G +   ++V+E  +        +GL   I ++  + + P +   ++
Sbjct: 196 SALPYFFGGLRISSGLSLIGAVVAEFVAG--TGGTGSGLAYQILQAGFQLNIPRLFAALM 253

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 254 LITVTGVVL 262



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 12/213 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P DI   + +  D   L      T    L A  ++ +     A + A+S  +     P
Sbjct: 62  PAPHDIARQLVV--DAPMLFAALFATLRITLLAFALATVLGVAIALVFAQSPLIEASFFP 119

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
              ++Q  PI+      +++  +     VI A L A+F I +        +    L ++ 
Sbjct: 120 YAILLQVTPIVAIAPLIIIWVKDTTFALVICATLVALFPIIS--------NTALGLRSVN 171

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L  + R  R + WQ    L VP ++P     + +S        V +E +         
Sbjct: 172 PGLVNLFRINRATRWQTLTRLRVPSALPYFFGGLRISSGLSLIGAVVAEFVAGTGGTGS- 230

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            G+   I  A  + ++  +  A++ +     + 
Sbjct: 231 -GLAYQILQAGFQLNIPRLFAALMLITVTGVVL 262


>gi|319938795|ref|ZP_08013159.1| glycine betaine transport system permease [Streptococcus anginosus
           1_2_62CV]
 gi|319811845|gb|EFW08111.1| glycine betaine transport system permease [Streptococcus anginosus
           1_2_62CV]
          Length = 510

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 65/186 (34%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +++++L+         +  +    V++ +++I+ +IP +  L   +             
Sbjct: 28  LSILLALILGVGLGIFISFKKSWAGVVIGLVNILYTIPSIALLGILISITGIG------- 80

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+    +  M  S Y  +  +   L E +     +  Q    + +P + P ++
Sbjct: 81  -NKTAIVALTLYALLPMVRSTYTGISGVDPLLIEAAEGMGSTRKQILTKVQLPLAFPVMM 139

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                        V  +  +    + +   G+G  I   I   +    L   + +  +  
Sbjct: 140 AGFR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNQTLTLVGSVLVALLAL 192

Query: 254 LYDQLL 259
           ++D LL
Sbjct: 193 VFDFLL 198



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 73/204 (35%), Gaps = 18/204 (8%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F +  V   IW+  ++       I++A I+ + +GI+I F+   +  +     +L   P
Sbjct: 13  QFLFSLVWDHIWISGLS-------ILLALILGVGLGIFISFKKSWAGVVIGLVNILYTIP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +     +++S     +    + L+L  +      ++ +   G S       E A     T
Sbjct: 66  SIALLGILISITGIGNKTAIVALTLYALL----PMVRSTYTGISGVDPLLIEAAEGMGST 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + LP  FP  + G         N   ++   +     +   GLG  I      
Sbjct: 122 RKQILTKVQLPLAFPVMMAGFR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITT 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +    ++G +++    L  +  L
Sbjct: 175 NNQTLTLVGSVLVALLALVFDFLL 198


>gi|15903719|ref|NP_359269.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae R6]
 gi|116516671|ref|YP_817092.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae D39]
 gi|15459351|gb|AAL00480.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae R6]
 gi|116077247|gb|ABJ54967.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae D39]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 21/171 (12%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I   L+E   +F ++ W++     +P +MP ++  +            A+ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAV 147

Query: 212 MIVVG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I+      T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 148 LIIGTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|54023117|ref|YP_117359.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
 gi|54014625|dbj|BAD55995.1| putative ABC transporter membrane protein [Nocardia farcinica IFM
           10152]
          Length = 282

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 93/229 (40%), Gaps = 15/229 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +       L    L  +A  + +R    + I +    +   ++  S     ++  
Sbjct: 63  AGPPAVWTAFTELLGNGQLIDFALASFVRAALGVGIGVSAGLLLGLVSGLSALGEELVDS 122

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + I++++P L  +   + +F           EL  I  I  + V  M    Y  + N+ 
Sbjct: 123 TMQILRAVPFLALVPLFIAWFGID--------ELYKILLIAVATVAPMYAYTYLGVRNVD 174

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R + E +R F LSG +    + +P ++PG++  + + +S     ++A+E +         
Sbjct: 175 RKMVEAARGFGLSGARLVREVVLPSALPGVLMALRVCLSISITGLIAAEQVG------TR 228

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            G+G  + LA +      ++  ++    +  ++D L+ R +  ++  +R
Sbjct: 229 EGVGYLVTLAQEYNRTDYMVLCVVLYALLGLVFDGLV-RLLERFAMPWR 276



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 75/267 (28%), Gaps = 11/267 (4%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P +     L           P            +  +  +W     G            +
Sbjct: 9   PATAQATPLTAPRARTERSRPAWVSVPLRFLLPALFVAAWWIGSATGAISERVIAGPPAV 68

Query: 368 VNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
              FT       +I     +  R  + + I     + +G+  G        +    Q+L 
Sbjct: 69  WTAFTELLGNGQLIDFALASFVRAALGVGIGVSAGLLLGLVSGLSALGEELVDSTMQILR 128

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P     PL ++          L+  LL+   T   +      G         E A  F
Sbjct: 129 AVPFLALVPLFIAWFGI----DELYKILLIAVATVAPMYAYTYLGVRNVDRKMVEAARGF 184

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++G R  R ++LP   P  +         +    I +E            G+G  +  +
Sbjct: 185 GLSGARLVREVVLPSALPGVLMALRVCLSISITGLIAAEQVG------TREGVGYLVTLA 238

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E      +VL V++     L  +  +
Sbjct: 239 QEYNRTDYMVLCVVLYALLGLVFDGLV 265


>gi|238895085|ref|YP_002919820.1| putative ABC transport system inner membrane component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262041754|ref|ZP_06014942.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|238547402|dbj|BAH63753.1| putative ABC transport system inner membrane component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259040886|gb|EEW41969.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 271

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 90/252 (35%), Gaps = 6/252 (2%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           +T     +     FL++     V+  + + W   V    I         ++    +  + 
Sbjct: 2   KTTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLT 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T+   ++  +++ +I   V   +     + + + P+   L   P     PL+
Sbjct: 62  PLLLALLFTLKITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLI 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V    L+  +  +L+      + I+ N   G  +            H + W+    +
Sbjct: 122 IIWVKDATLSLVVCATLM----AVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY+      + G +   ++V+E  +        TGL   I ++  +   P +  
Sbjct: 178 RIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGTNTGLAYQILQAGYQLDIPLMFA 235

Query: 558 GVLIMCCFVLAL 569
            +L++    +AL
Sbjct: 236 ALLLISLAGIAL 247



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L + ++S++     A +  ++R +   L P +  +Q  PI+      +++  +      
Sbjct: 74  TLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKD------ 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A L+ +       V+ +  +  Q L ++   L    R    S WQ    L +P ++P 
Sbjct: 128 --ATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIPSALPY 185

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM--- 248
               + +S        V +E +          G+   I  A  + D+  +  A+L +   
Sbjct: 186 FFGALRISSGLSLIGAVVAEFVAGTGGTNT--GLAYQILQAGYQLDIPLMFAALLLISLA 243

Query: 249 -LGVIFLYDQLLFRPMIVWSN 268
            + +  +   +  R +  W  
Sbjct: 244 GIALFGVMSWVSRRALSAWHE 264


>gi|111223651|ref|YP_714445.1| putative ABC transporter permease [Frankia alni ACN14a]
 gi|111151183|emb|CAJ62894.1| putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 293

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 17/263 (6%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--------- 370
           +   R         L S   +   +   +  +   V+ G+      +++           
Sbjct: 22  VTPARPRSRRRGAGLVSFVLLPGAVFAVFIGLWYAVSDGVLNDQQRFMLPPPHEVVRVGF 81

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             + +   ++    +T       + I+ +I + V + +     + + + P+A ++   P 
Sbjct: 82  LDWSNFTTMMSALRLTCEVTFSGLAISIVIGVAVAVAMSQAKWVENSLYPWAVVIQTVPI 141

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P++     +   +      ++ +    + I+ N + G  +      E+ S  H   
Sbjct: 142 LALTPVLSFFFGFALTS----RIIVCVIIAFFPIVSNTLFGLQSVDRGMHELFSLHHTGR 197

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 + LP   P   TG   A G +   +IV E            GLG  ++  T + 
Sbjct: 198 LTRLWKLQLPAALPSMFTGFRNAAGLSVIGAIVGEFF----FKQGEPGLGTNLSVFTSRL 253

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               +    L      +A+  F 
Sbjct: 254 EGERLWATTLTASLLGVAVFVFF 276



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVL 100
              P ++V +  +     +    A R T  +  S + IS++     A   ++++ +   L
Sbjct: 70  LPPPHEVVRVGFLDWSNFTTMMSALRLTCEVTFSGLAISIVIGVAVAVAMSQAKWVENSL 129

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P   ++Q++PIL        +F      ++I   + A F I ++ ++         L +
Sbjct: 130 YPWAVVIQTVPILALTPVLSFFFGFALTSRIIVCVIIAFFPIVSNTLF--------GLQS 181

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + R + E+          + W L +P ++P +      +        +  E         
Sbjct: 182 VDRGMHELFSLHHTGRLTRLWKLQLPAALPSMFTGFRNAAGLSVIGAIVGEFF----FKQ 237

Query: 221 PLPGIGSYIALAIKEQD----LLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             PG+G+ +++     +        L A L  + V   +  L  R +  W
Sbjct: 238 GEPGLGTNLSVFTSRLEGERLWATTLTASLLGVAVFVFFGWLARRVVGRW 287


>gi|88604210|ref|YP_504388.1| phosphate ABC transporter permease [Methanospirillum hungatei JF-1]
 gi|88189672|gb|ABD42669.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanospirillum hungatei JF-1]
          Length = 649

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 81/487 (16%), Positives = 170/487 (34%), Gaps = 37/487 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L  + AMV ++ F    A   A+  S R+  +L P ++++  IP + +    L   V 
Sbjct: 84  TLLVTMGAMVFAVPFGIACAIFIAELASPRMRNILKPAVELLAGIPSVVYGFFGLAILVK 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +L       + LA    +    +  +      ++ ++PR L+E S +   + WQ   
Sbjct: 144 FLQDLLSVPSGESVLAGSILLGIMSLPTIISVSEDAISSVPRYLKEGSLALGATHWQTIS 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--GIGSYIALAIKEQDLL 239
            + VP ++ G+   +++ +       +A  M+     +IP P   I S +        + 
Sbjct: 204 QVIVPAALSGITAAVILGIGRAVGETMAVIMVTGNAAIIPSPIWNILSPVRTLTGTLGIE 263

Query: 240 AILYAMLTM------LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
               A+ ++         + L    L   +   +   RL+ +     + + V      T+
Sbjct: 264 MGEVAVGSLHYHALFGVAVILLLITLIINLTALTVMKRLKSSQTGGCSRTGVFSCLMITD 323

Query: 294 FLRFI--------GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
            L  I              F   +          +  +     + +    + Q++ + L 
Sbjct: 324 RLSGIIPYLPIGVTAILGLFLLLIGLWQGAAGILILYLIARLVDRYCIRQTVQKIWFSLI 383

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIWLGCITMFRVVVLII 395
                +V  + I I +      + + T                +      T + V+  I+
Sbjct: 384 TIMMGIVTFILIFILYDIFSNGLPYVTLDFLTESPRNLGRGGGIFPAIIGTFYLVIGSIL 443

Query: 396 IASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNL 450
           IA  + I   I++        ++  I+    LL   P+ VF  F      +        L
Sbjct: 444 IALPLGIGAAIYLVEYTKENILTRFIRTATDLLNGTPSIVFGLFGFTFLVLFLGFGISLL 503

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       ++        + P+  +E + +   T W+  R ++LP   P  +TGA
Sbjct: 504 AGMITLALMVLPTVIRTTEEALKSVPDSLREGSYALGATRWQTVRRVVLPPSVPGIITGA 563

Query: 511 ITACGGA 517
           I + G A
Sbjct: 564 ILSIGRA 570



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 70/189 (37%), Gaps = 9/189 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +   +V  I+  +L+ I    +P   +D +  +              +     ++ S+L
Sbjct: 384 TIMMGIVTFILIFILYDIFSNGLPYVTLDFLTESPRNLGRGGGIFPAIIGTFYLVIGSIL 443

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
                   AA       K   L   +    D++   P + F  F   + +      +  +
Sbjct: 444 IALPLGIGAAIYLVEYTKENILTRFIRTATDLLNGTPSIVFGLFGFTFLVLFLGFGI--S 501

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA +  +    +  +  +  ++L ++P  L E S +   + WQ    + +P S+PG++ 
Sbjct: 502 LLAGMITLALMVLPTVIRTTEEALKSVPDSLREGSYALGATRWQTVRRVVLPPSVPGIIT 561

Query: 195 NMMMSMSGG 203
             ++S+   
Sbjct: 562 GAILSIGRA 570


>gi|229822266|ref|YP_002883792.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229568179|gb|ACQ82030.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 317

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 93/250 (37%), Gaps = 18/250 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDV-HSLPQYASRTT 69
           ++ P +  L   V V  ++++++           P ++V       +V   +     +T 
Sbjct: 63  KVGPIVAALAGIVAVWYLVSLVVLSPDRRFLLPPPHEVVANTLGNPNVMGPMLAALGQTV 122

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           L  L+ + I+++    YA + ++S     VL P   I+Q+IPIL  +    ++    +P 
Sbjct: 123 LVALAGLAIAVVLGLAYAVVMSQSVWAERVLYPYAVILQTIPILALVPLIGIWLGYGFP- 181

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                  A I       ++ M  +    L +      ++    + + WQ+   L  P ++
Sbjct: 182 -------ARIVVCVIIALFPMISNTLFGLLSASPAAHDLFTLNKATRWQRLGKLQFPAAL 234

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--T 247
           P +   +  +        +  +           PGIG  +       ++ A+  A++   
Sbjct: 235 PSIFTGLRNAAGLSVIGAIVGDFF----FQQGSPGIGGLLRTYTLRLNMDALFMAIILTA 290

Query: 248 MLGVIFLYDQ 257
           + GV+     
Sbjct: 291 VFGVVVFSIF 300



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 74/205 (36%), Gaps = 15/205 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +  + IA ++ +   + +         + P+A +L   P     PL+   + Y  
Sbjct: 121 TVLVALAGLAIAVVLGLAYAVVMSQSVWAERVLYPYAVILQTIPILALVPLIGIWLGYGF 180

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   ++ +    + ++ N + G  +      ++ +    T W+    +  P   P 
Sbjct: 181 ----PARIVVCVIIALFPMISNTLFGLLSASPAAHDLFTLNKATRWQRLGKLQFPAALPS 236

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A G +   +IV +          + G+G  +   T + +   + + +++   F
Sbjct: 237 IFTGLRNAAGLSVIGAIVGDFF----FQQGSPGIGGLLRTYTLRLNMDALFMAIILTAVF 292

Query: 566 VL-------ALNRFLWHPLYLYGTR 583
            +       AL+R +    Y +  R
Sbjct: 293 GVVVFSIFAALDRAVIGRWYGHTAR 317


>gi|225855295|ref|YP_002736807.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae JJA]
 gi|225723126|gb|ACO18979.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae JJA]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|149024984|ref|ZP_01836364.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP23-BS72]
 gi|147929477|gb|EDK80472.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP23-BS72]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|148984313|ref|ZP_01817608.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP3-BS71]
 gi|147923602|gb|EDK74715.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP3-BS71]
 gi|301800642|emb|CBW33285.1| ABC-type glycine betaine transport system protein [Streptococcus
           pneumoniae OXC141]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|149006485|ref|ZP_01830184.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP18-BS74]
 gi|168483392|ref|ZP_02708344.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae CDC1873-00]
 gi|225861655|ref|YP_002743164.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|147761783|gb|EDK68746.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP18-BS74]
 gi|172043323|gb|EDT51369.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae CDC1873-00]
 gi|225726883|gb|ACO22734.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390023|gb|EGE88368.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA04375]
 gi|332199881|gb|EGJ13956.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA41317]
 gi|332200416|gb|EGJ14489.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA47368]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|323137123|ref|ZP_08072202.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
 gi|322397481|gb|EFY00004.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
          Length = 251

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 101/247 (40%), Gaps = 14/247 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               LA +L +  I   +   +    P  + + +       +L    + T  R++++  +
Sbjct: 3   RIVSLALLLGVWQIGAWMSDPRRLPGPSLVFEAIYEEARSGALFSNLAITLARVIASFAL 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++        L  ++R    +L P L  + ++P L  +    V+            E+AA
Sbjct: 63  AMSLGAAIGYLMGRNRLADRLLDPWLVALLNLPALVVIVLAYVWAGL--------TEVAA 114

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I A+  +++ N    + +    +   LEE++++F  S   +F +L +P   P L      
Sbjct: 115 IGAVALNKLPNAVVVVREGARALDPQLEEMAQAFHFSRATRFRHLVLPQLAPYLAAATRS 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  W  V+  E++   +      G+G  I +A +  D+  +L   L  + ++   + L
Sbjct: 175 GLSLVWKVVLVVELLGRSN------GVGFEINMAFQLFDMKLLLAYALPFVALMLGVETL 228

Query: 259 LFRPMIV 265
           L +P+  
Sbjct: 229 LVQPLER 235



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT+ RV+    +A  +   +G  +G        + P+   L   PA V   L  
Sbjct: 45  LFSNLAITLARVIASFALAMSLGAAIGYLMGRNRLADRLLDPWLVALLNLPALVVIVLAY 104

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +     +        +  V  GA A     +E+A +FH +    +R+++
Sbjct: 105 VWAGLT----EVAAIGAVALNKLPNAVVVVREGARALDPQLEEMAQAFHFSRATRFRHLV 160

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + PY      +     W   +V E+        R+ G+G  I  + +      ++  
Sbjct: 161 LPQLAPYLAAATRSGLSLVWKVVLVVELLG------RSNGVGFEINMAFQLFDMKLLLAY 214

Query: 559 VLIMCCFVLALNRFLWHPLYL 579
            L     +L +   L  PL  
Sbjct: 215 ALPFVALMLGVETLLVQPLER 235


>gi|146342391|ref|YP_001207439.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195197|emb|CAL79222.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 261

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 79/222 (35%), Gaps = 19/222 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +        +     +     IT++  ++   I S+  + VG W   +P +++   P+ +
Sbjct: 44  VDVAAQVVKWFATGAIWKHLAITLWESILAFAIGSLGGVLVGFWFARKPLVAAVFDPYVK 103

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P  V  P+    +     +       L+ F     + FNV  G        ++ A
Sbjct: 104 MANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSTVVRDNA 159

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++  +  R++  P    +  +   T+ G A   ++V E            GLG  I
Sbjct: 160 RMLGMSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAGLGYLI 213

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNR---------FLWHP 576
            ++        V  G+ ++  FV+ ++           +W P
Sbjct: 214 QQAEGVFDVAGVFAGMFVLSAFVILIDICVTLVERRLLVWRP 255



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 80/225 (35%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+   V       ++ ++ + T    + A  I  L   +     A+   +  V  P +
Sbjct: 43  PVDVAAQVVKWFATGAIWKHLAITLWESILAFAIGSLGGVLVGFWFARKPLVAAVFDPYV 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  ++P +       ++       KV        F +F        F++YQ +  +   
Sbjct: 103 KMANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSTV 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + + +R   +S  Q   ++  P ++  +  ++  S+       V  E +          G
Sbjct: 155 VRDNARMLGMSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAG 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +G  I  A    D+  +   M  +   + L D    L+ R ++VW
Sbjct: 209 LGYLIQQAEGVFDVAGVFAGMFVLSAFVILIDICVTLVERRLLVW 253


>gi|330466132|ref|YP_004403875.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328809103|gb|AEB43275.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 255

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 13/174 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +        + L   P+    PL V               +++I+ + W +   VI G
Sbjct: 84  PFLRRATHTMIEFLRPIPSVALIPLAVLMFGI----QMQAALVIIIYASFWQVFVQVIYG 139

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +      ++ A SF +T      +++LP   PY +TG   A   A   +I +E+     
Sbjct: 140 VADVDAVARDTARSFGLTRREQLTHLVLPTALPYLMTGVRLAAAVALILAITAEMV---- 195

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
             +   GLG  I  S   G    +   V++     LA+N   RF+      +  
Sbjct: 196 --IGNPGLGRMIELSRSAGDSVGLYAFVVVTGLLGLAVNLVFRFVERRTLSWHE 247



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 98/267 (36%), Gaps = 18/267 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLR 71
           R+    +  L  F++V  +I  L     +      D+   +       +  +    T   
Sbjct: 2   RKALLGLTGLAGFLVVWQLIPTLGLINSQYLPYVTDVFARLAEESVDLAFWRRLGSTMKS 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               + ++     V  T+      L      +++ ++ IP +  +   V+ F        
Sbjct: 62  WAIGLTVATFAAVVLGTVVGLVPFLRRATHTMIEFLRPIPSVALIPLAVLMFGIQM---- 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                AA+  I  +  W +   +   + ++     + +RSF L+  ++  +L +P ++P 
Sbjct: 118 ----QAALVIIIYASFWQVFVQVIYGVADVDAVARDTARSFGLTRREQLTHLVLPTALPY 173

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAILYAMLTM 248
           L+  + ++ +      + +EM++        PG+G  I L+    D   L A +     +
Sbjct: 174 LMTGVRLAAAVALILAITAEMVIGN------PGLGRMIELSRSAGDSVGLYAFVVVTGLL 227

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERT 275
              + L  + + R  + W    R E+ 
Sbjct: 228 GLAVNLVFRFVERRTLSWHESIRGEQA 254


>gi|227327210|ref|ZP_03831234.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 288

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 85/206 (41%), Gaps = 10/206 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    LPQ    +   +L   VI  L     + LA  +R    +L  +  +   +P + 
Sbjct: 78  DLASGELPQKMVVSLGTLLKGYVIGSLLALALSALAVSTRFGRDLLGTLTSMFNPLPAIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F           E + +F +  S +W M  + Y     +   L    R++ L
Sbjct: 138 LLPLALLWFGLG--------EKSLVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G++    + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 190 TGFRYISAILIPAALPSIISGLKIGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRN 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
           E     +   + +++ +  L + L+F
Sbjct: 248 ELYTDRVFAGLASVIIIGLLVEGLVF 273



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G        +    ++ +TG+R+   I++P   P  ++G  
Sbjct: 153 LVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYISAILIPAALPSIISGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFSTIEKVTVKR 283


>gi|163851146|ref|YP_001639189.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163662751|gb|ABY30118.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 264

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 79/249 (31%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V   +   W     G A+         ++     Q+   ++
Sbjct: 1   MRRPLIQDPRVQAALPPLLVGIAVLSLWEAACRGFAVPEYLFPAPTVIAASLVQNGPDLL 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T+   ++   +++++   V         I     P+A +L   P     PL++  
Sbjct: 61  RALWSTLRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIIL 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V        +  +++ IF     ++ N   G  +       +   +  +  +    + +P
Sbjct: 121 VRDTQAALVICATIIAIF----PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRLRIP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               Y+  G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + 
Sbjct: 177 SALGYFFAGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALS 234

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 235 LITAAGILL 243



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 85/252 (33%), Gaps = 12/252 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQ 63
             P     R+   +  LL  + V+ +      G            ++  +L  +   L +
Sbjct: 2   RRPLIQDPRVQAALPPLLVGIAVLSLWEAACRGFAVPEYLFPAPTVIAASLVQNGPDLLR 61

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               T    L A  +S +   + A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTLRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF         M  +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQAALVICATIIAIF--------PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITAAGILL 243


>gi|148989653|ref|ZP_01820985.1| choline transporter [Streptococcus pneumoniae SP6-BS73]
 gi|147924970|gb|EDK76052.1| choline transporter [Streptococcus pneumoniae SP6-BS73]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|192291281|ref|YP_001991886.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285030|gb|ACF01411.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 332

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 86/286 (30%), Gaps = 16/286 (5%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
               + + S + F+ ++  V  +   L V          ++  +     ++   W  +  
Sbjct: 44  LPDVVPWGSASLFASITAGVAAIFLALSVTVHRL-GRAGEVLVHYGPWVIVVGIWLAIWE 102

Query: 354 GVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                  W    +             D   ++     T+    +  +   ++   VG+ +
Sbjct: 103 LTTAKFGWLPKPFFSPPHGLLNVYVTDGSRLLICIGYTLRLWALGFLSGIVVGYGVGVAL 162

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+    S    P  +L+   PA  + P                   ++   +   +    
Sbjct: 163 GWSRRFSYWGMPLLKLIGPVPATAWIPCTFYFFPTTFG----ASIFIVALASGIPVAILT 218

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +G  +    + +V            R + +P   P+   G   A   ++   +V+E+  
Sbjct: 219 ASGVGSVNRAYYDVGRILGADSRYLIRRVAIPAAMPHVFVGLFMALYYSFAVLVVAEMLG 278

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                    GLG YI   T    +  V   +LIM      + R L+
Sbjct: 279 ------AKYGLGWYIQFQTAYSGYANVYAALLIMALLCAGIIRLLF 318



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 17/218 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D   L      T        +  ++  +        SRR     +P+L ++  +P   +
Sbjct: 128 TDGSRLLICIGYTLRLWALGFLSGIVVGYGVGVALGWSRRFSYWGMPLLKLIGPVPATAW 187

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  T  +F   +         A+IF +  +    +       + ++ R   +V R     
Sbjct: 188 IPCTFYFFPTTFG--------ASIFIVALASGIPVAILTASGVGSVNRAYYDVGRILGAD 239

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                  + +P +MP +   + M++   +  +V +EM+          G+G YI      
Sbjct: 240 SRYLIRRVAIPAAMPHVFVGLFMALYYSFAVLVVAEMLG------AKYGLGWYIQFQTAY 293

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270
                +  A+L M  +     +LLF     ++ W   F
Sbjct: 294 SGYANVYAALLIMALLCAGIIRLLFVVRDRLLNWQEGF 331


>gi|322377543|ref|ZP_08052034.1| choline transporter [Streptococcus sp. M334]
 gi|321281743|gb|EFX58752.1| choline transporter [Streptococcus sp. M334]
          Length = 511

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 47  VYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 102

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 103 QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIRTAAVLIIGTATLAA 162

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 163 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNILL 203



 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 54  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 105

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 106 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVMMSGIR----------TAAVLII 155

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 156 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNILL 203


>gi|303254630|ref|ZP_07340732.1| choline transporter [Streptococcus pneumoniae BS455]
 gi|303258806|ref|ZP_07344786.1| choline transporter [Streptococcus pneumoniae SP-BS293]
 gi|303261969|ref|ZP_07347915.1| choline transporter [Streptococcus pneumoniae SP14-BS292]
 gi|303263831|ref|ZP_07349753.1| choline transporter [Streptococcus pneumoniae BS397]
 gi|303265634|ref|ZP_07351533.1| choline transporter [Streptococcus pneumoniae BS457]
 gi|303268743|ref|ZP_07354532.1| choline transporter [Streptococcus pneumoniae BS458]
 gi|301802552|emb|CBW35313.1| ABC-type glycine betaine transport system protein [Streptococcus
           pneumoniae INV200]
 gi|302598342|gb|EFL65386.1| choline transporter [Streptococcus pneumoniae BS455]
 gi|302637052|gb|EFL67541.1| choline transporter [Streptococcus pneumoniae SP14-BS292]
 gi|302640307|gb|EFL70762.1| choline transporter [Streptococcus pneumoniae SP-BS293]
 gi|302641699|gb|EFL72057.1| choline transporter [Streptococcus pneumoniae BS458]
 gi|302644761|gb|EFL75009.1| choline transporter [Streptococcus pneumoniae BS457]
 gi|302646869|gb|EFL77094.1| choline transporter [Streptococcus pneumoniae BS397]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|221195060|ref|ZP_03568116.1| glycine betaine transport system permease protein [Atopobium rimae
           ATCC 49626]
 gi|221184963|gb|EEE17354.1| glycine betaine transport system permease protein [Atopobium rimae
           ATCC 49626]
          Length = 513

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +A+VI+++   +   L +  +R     + +++ + +IP +  L F + +          
Sbjct: 30  FAAVVIAIIVGGITGILISHFQRTAKPTLAVINFLYTIPSISMLGFLIPFSGIGN----- 84

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  M  + +  L NI   L E +     +  Q    + +P ++P +
Sbjct: 85  ---ATAVIALTVYALLPMVINTHTGLTNIDPLLVEAAEGMGSTTLQTLVKIKIPLALPVI 141

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +           V +  +    + I   G+G  I   I   +    +   L +  + 
Sbjct: 142 MSGIR-------SMTVMTIALGGIASFIGAGGLGVAIYRGITTNNSAMTMDGSLLIAFLA 194

Query: 253 FLYDQLL 259
              D LL
Sbjct: 195 LTVDFLL 201



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++IA I+    GI I      +         L   P+      ++      +    +
Sbjct: 30  FAAVVIAIIVGGITGILISHFQRTAKPTLAVINFLYTIPSISMLGFLIPFSGIGNATAVI 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  +      ++ N   G +       E A     T  +    I +P   P  ++G 
Sbjct: 90  ALTVYALL----PMVINTHTGLTNIDPLLVEAAEGMGSTTLQTLVKIKIPLALPVIMSGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +        ++++         +   GLG  I       +    + G L++    L ++
Sbjct: 146 RS-------MTVMTIALGGIASFIGAGGLGVAIYRGITTNNSAMTMDGSLLIAFLALTVD 198

Query: 571 RFL 573
             L
Sbjct: 199 FLL 201


>gi|332201271|gb|EGJ15342.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA47901]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|254560841|ref|YP_003067936.1| permease component of ABC transporter [Methylobacterium extorquens
           DM4]
 gi|254268119|emb|CAX23995.1| putative permease component of ABC transporter [Methylobacterium
           extorquens DM4]
          Length = 264

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 78/249 (31%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V   +   W     G A+         ++     Q+   ++
Sbjct: 1   MRRPLIQDPRVQAALPPLLVGLAVLSLWEAACRGFAVPEYLFPAPSVIAASLIQNGPDLL 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                TM   ++   +++++   V         I     P+A +L   P     PL++  
Sbjct: 61  RALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIIL 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V     +  + L +       + ++ N   G  +       +   +  +  +    + +P
Sbjct: 121 VR----DTQIALVICATIIAIFPMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRLRIP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               Y+  G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + 
Sbjct: 177 SALGYFFAGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALS 234

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 235 LITAAGILL 243



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 85/252 (33%), Gaps = 12/252 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQ 63
             P     R+   +  LL  + V+ +      G            ++  +L  +   L +
Sbjct: 2   RRPLIQDPRVQAALPPLLVGLAVLSLWEAACRGFAVPEYLFPAPSVIAASLIQNGPDLLR 61

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               T    L A  +S +   + A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF         M  +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQIALVICATIIAIF--------PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITAAGILL 243


>gi|229826647|ref|ZP_04452716.1| hypothetical protein GCWU000182_02023 [Abiotrophia defectiva ATCC
           49176]
 gi|229789517|gb|EEP25631.1| hypothetical protein GCWU000182_02023 [Abiotrophia defectiva ATCC
           49176]
          Length = 515

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 62/173 (35%), Gaps = 15/173 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
              + +I+++         +   +L   ++ I++++ +IP +  L F + +         
Sbjct: 27  TFVSAIIAIIIGLSVGIWISTKPKLANYVISIVNVVYTIPSIALLGFLISFTGIGNT--- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI A+    +  +  S Y  +  I   + E  R+     +Q  + + +P + P 
Sbjct: 84  -----TAIIALIIYALLPIVRSTYVGITTIDPKIIEAGRAMGSKEFQVLYKIKLPLAFPV 138

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +  ++          V  +  +    + +   G+G  I   I   + + I   
Sbjct: 139 IFVSIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSVLIFIG 184



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V  IIA II + VGIWI  +P +++ +     ++   P+      ++S     +    +
Sbjct: 28  FVSAIIAIIIGLSVGIWISTKPKLANYVISIVNVVYTIPSIALLGFLISFTGIGNTTAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I+ +   G +       E   +     ++    I LP  FP      
Sbjct: 88  ALIIYALL----PIVRSTYVGITTIDPKIIEAGRAMGSKEFQVLYKIKLPLAFPVIFVSI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                   N   ++   +     +   GLG  I       +   + +G
Sbjct: 144 R-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSVLIFIG 184


>gi|146328799|ref|YP_001209178.1| ABC transporter [Dichelobacter nodosus VCS1703A]
 gi|146232269|gb|ABQ13247.1| ABC transporter domain protein [Dichelobacter nodosus VCS1703A]
          Length = 244

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 82/222 (36%), Gaps = 14/222 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +  +  +  D   L +++  T L +  ++ I+ +F    A +   + RL   L P++
Sbjct: 34  PSPLAVLQCLYTDFDVLWRHSRVTVLEIALSLGIASVFGTATALILMINARLRRWLQPLI 93

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            + Q++P+       +++F      K+I   L   F         +T + +  L   P  
Sbjct: 94  LVSQTMPVYALAPILMLWFGYGLTPKIIVTVLIVYF--------PITTATFDGLQQTPPA 145

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
              ++++   +  Q  W + +P ++P L   + +  +      +  E +   D      G
Sbjct: 146 YLRLAQTLGANPRQILWRIRMPAALPHLASGLRVGAAMAPIGAIIGEYVGGSD------G 199

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +G  +   I    +     A+  M  +       +   +  W
Sbjct: 200 LGYLMQYGINRSQVALTFAALFVMTLLTLAIYYGIDALLKKW 241



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y D   +     +T+  + + + IAS+      + +     +   +QP   +    P   
Sbjct: 44  YTDFDVLWRHSRVTVLEIALSLGIASVFGTATALILMINARLRRWLQPLILVSQTMPVYA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+++    Y  L P + +++L+++   + I      G    P  +  +A +      +
Sbjct: 104 LAPILMLWFGYG-LTPKIIVTVLIVY---FPITTATFDGLQQTPPAYLRLAQTLGANPRQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I +P   P+  +G       A   +I+ E            GLG  +     +   
Sbjct: 160 ILWRIRMPAALPHLASGLRVGAAMAPIGAIIGEYVGGSD------GLGYLMQYGINRSQV 213

Query: 553 PEVVLGVLIMCCFVLAL 569
                 + +M    LA+
Sbjct: 214 ALTFAALFVMTLLTLAI 230


>gi|293570303|ref|ZP_06681372.1| ABC transporter, substrate-binding protein [Enterococcus faecium
           E980]
 gi|291609710|gb|EFF38971.1| ABC transporter, substrate-binding protein [Enterococcus faecium
           E980]
          Length = 583

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + + W+   +I+            D   ++     T+   V+ + IAS++  
Sbjct: 13  FILIIWQIVVLVWKIPAFILPGPAAVFSALTADAHVLLSHSVTTLNEAVIGLAIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLAGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 91/234 (38%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +L+  I    +P        +T D H L  ++  T    +  + I+ + 
Sbjct: 11  MAFILIIWQIVVLVWKIPAFILPGPAAVFSALTADAHVLLSHSVTTLNEAVIGLAIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLAGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             + V  +   VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ATYCVSGA---VVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|237799630|ref|ZP_04588091.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022485|gb|EGI02542.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 146

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + +  I     + +  +   ++  I R L EV + +  + ++    + +P ++PGL  
Sbjct: 9   ETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFNRYRLTRRILLPAALPGLFT 68

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   MS  W F+VA+E+I          G+G  ++   +      +L A++ +  +  L
Sbjct: 69  GLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKL 122

Query: 255 YDQLLF---RPMIVWSNKFR 271
            D +L    +  + W + F+
Sbjct: 123 SDSVLAGLEKRFLAWRDTFK 142



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +     +      +L+  G  + +  N +A          EV   +    +R  R 
Sbjct: 1   MLLWLGIGETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFNRYRLTRR 56

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P   TG  +    AW   + +E+ +       T GLG  +++  E      V+
Sbjct: 57  ILLPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVL 110

Query: 557 LGVLIMCCFVLALNRFL 573
             ++++       +  L
Sbjct: 111 AAIIVLATLGKLSDSVL 127


>gi|288553858|ref|YP_003425793.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus pseudofirmus OF4]
 gi|288545018|gb|ADC48901.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Bacillus pseudofirmus OF4]
          Length = 271

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 85/217 (39%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           ++P  I +++   +   +L  + S T    +   +I  L   + A +   S     VL P
Sbjct: 58  SMPSRIFNLLVTRITDGTLITHTSVTLFETVLGFIIGTLAGTILAAVLWWSPFTSKVLDP 117

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ S+P +      +V     +   +    L ++           T  +Y +   + 
Sbjct: 118 YLVILNSMPKVALGPILIVGLGPGFTSIIAMGALISVII--------TTMVVYTAFKEVD 169

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F+ S  Q F  + +P  +P ++  + +++   W  V+  E +V        
Sbjct: 170 ANYIKVMQTFQASKRQTFQSVILPACVPTIISTLKVNVGLSWVGVIVGEFLV------SK 223

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++  +  +  +  + +
Sbjct: 224 QGLGYLIIYGFQVFNFTLVLMSLFVIAILATIMYKAV 260



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I    +T+F  V+  II ++    +   + + P  S  + P+  +L + P     P+
Sbjct: 74  GTLITHTSVTLFETVLGFIIGTLAGTILAAVLWWSPFTSKVLDPYLVILNSMPKVALGPI 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +     +     +L+ +  T       V         ++ +V  +F  +  + ++ 
Sbjct: 134 LIVGLGPGFTSIIAMGALISVIIT----TMVVYTAFKEVDANYIKVMQTFQASKRQTFQS 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++      G +W   IV E        +   GLG  I    +  +F  V+
Sbjct: 190 VILPACVPTIISTLKVNVGLSWVGVIVGEFL------VSKQGLGYLIIYGFQVFNFTLVL 243

Query: 557 LGVLIMCCFVLALNRFL 573
           + + ++      + + +
Sbjct: 244 MSLFVIAILATIMYKAV 260


>gi|194397596|ref|YP_002038450.1| ABC transporter substrate-binding/permease [Streptococcus
           pneumoniae G54]
 gi|194357263|gb|ACF55711.1| ABC transporter, substrate-binding/permease protein [Streptococcus
           pneumoniae G54]
          Length = 506

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|21230246|ref|NP_636163.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|77761291|ref|YP_244523.2| permease [Xanthomonas campestris pv. campestris str. 8004]
 gi|21111790|gb|AAM40087.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913]
          Length = 293

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P          L    L +    +   +    V+ ++  FV   LAA +R    +L 
Sbjct: 70  LPSPWQTAQAFYTGLLSGELLRRVGTSLRVLAQGYVVGVVLAFVLTALAASTRWGRDLLG 129

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 130 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYARFQAV 181

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 182 PDTLRMAGRNYGLRGPRYVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 239

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 240 QGGLGWYIFQNRNELYTDRVFAGLAMVIALGLLVEGVVFQAIERLTVR 287



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 89/295 (30%), Gaps = 11/295 (3%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +   L         +   L      L +     R+  P    +      +     +    
Sbjct: 4   RGTALPATPPVRPEYEVALQPLDPALLQVHAQARWQAPGWLRKALVLAVLVAAWYVAARV 63

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIG 409
           V   + +   WQ+           ++L  +     T  RV+    ++  ++   +     
Sbjct: 64  VADDLMLPSPWQTAQAFYTGLLSGELLRRVG----TSLRVLAQGYVVGVVLAFVLTALAA 119

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                   +     +    PA    PL +        +    L  +++    W +     
Sbjct: 120 STRWGRDLLGTLTAMFNPLPAIALLPLALLWFGLGTGS----LVFVLVHSVLWPLALTTY 175

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A   A P+  +    ++ + G R+   +++P   P  ++G       AW   I +E+   
Sbjct: 176 ARFQAVPDTLRMAGRNYGLRGPRYVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFG 235

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                   GLG YI ++  +     V  G+ ++    L +   ++  +     R 
Sbjct: 236 A--TSGQGGLGWYIFQNRNELYTDRVFAGLAMVIALGLLVEGVVFQAIERLTVRR 288


>gi|219851146|ref|YP_002465578.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanosphaerula palustris E1-9c]
 gi|219545405|gb|ACL15855.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanosphaerula palustris E1-9c]
          Length = 645

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 89/546 (16%), Positives = 195/546 (35%), Gaps = 41/546 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VHSLPQYA 65
           +  ++  +++ + A   V+ +I ILL   +++ +    + I+P         V ++P Y 
Sbjct: 23  LKEKVIESLWLICALFSVLTVIFILLFLFKDSYLGFVQIGILPFLTGMTWNPVAAIPSYG 82

Query: 66  SR-----TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF--- 115
                  T L  L +MVI++  +   A   ++    R+ +++ P ++++  IP + +   
Sbjct: 83  IAPLIVGTLLVTLGSMVIAVPLSIGTAVYISELAPPRVKLIIKPAIELLAGIPSVVYGFF 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L     +   L+      + LA    +    +  +T     ++ ++P++  E S +   
Sbjct: 143 GLMVMTNWLRVLFDQPSGESWLAGSLLLGIMALPTITSVAEDAIRSVPQEYREGSLAVGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------- 223
           + WQ    + VP ++ G+   +++ M       +A  M+     VIP P           
Sbjct: 203 TRWQTISKVVVPAALSGITAAIILGMGRAIGETMAVMMVTGNSAVIPSPIFNVLSPVRTL 262

Query: 224 ----GI--GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
               GI  G   + ++    L  +   +L +  ++ L   L+ + +          +   
Sbjct: 263 TGTLGIEMGEVASGSLHYHALFGVAVVLLLITLIVNLGAVLILKRLNAQRPASMFLKNAP 322

Query: 278 IYPADSWVLY-LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                   L  L   T  +  IG          +  +  + + L          F     
Sbjct: 323 ALVRRGLKLVPLLVVTVIIYAIGGIIGVGLLACAGVLWLVAQRLSPKTAQRIAFFFLHLG 382

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
              V  +L I  F +V      I+W+ +            ++   +G  T++ V   I+ 
Sbjct: 383 VGLVLLVLGIILFDIVSHGLPAISWEFLTTAPRDLGRAGGIFPAIVG--TLYLVAGSILF 440

Query: 397 ASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWL 452
           A    +   I++       +++  I+    LL   P+ VF        V Y  +  ++  
Sbjct: 441 ALPFGVGAAIYLNEYRMEGYLTQMIRTGIDLLNGTPSIVFGLFGFTFLVLYLDIGVSMLA 500

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L +       +           P+  +E + +   T W+    ++LP      +TG I
Sbjct: 501 GQLTLGLMVLPTIIRTTEEALKNVPSSLREGSLALGATRWQTISRVVLPSAVAGIITGTI 560

Query: 512 TACGGA 517
            + G A
Sbjct: 561 LSIGRA 566


>gi|134301036|ref|YP_001114532.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134053736|gb|ABO51707.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 265

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 11/242 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITM 387
                      ++  + +  + +   V+   AW   G      +   V  ++W  G  T+
Sbjct: 9   RRDFATIFLPGLTLFMLLVLWELGVKVSKVEAWILPGPSQIVTSLWQVRELLWQHGVQTI 68

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +   +   +A I+ I +   I +   +   I P   +    P     PL++    Y  L 
Sbjct: 69  YETFLGFSLAIIVGIALATVIDWSETLRKAIYPLLIISQTIPIIAVAPLLIIWFGYGLLP 128

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 L++     + I  N+  G      +   + S+      R +  + LP   P++ 
Sbjct: 129 K----ILVVALVCFFPITINLADGYRLVDREMIRLMSAMGAGPGRIFTMVKLPAALPFFF 184

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   A   +   +++ E          + GLG ++  S++      V   ++++ C  L
Sbjct: 185 SGLRIAGTYSVMGAVIGEWLG------ASKGLGIFMTRSSQSYLTDRVFAAIILITCLSL 238

Query: 568 AL 569
            +
Sbjct: 239 LI 240



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 102/253 (40%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  +LV+  + + +  ++   +P     +  +      L Q+  +T         ++++
Sbjct: 21  TLFMLLVLWELGVKVSKVEAWILPGPSQIVTSLWQVRELLWQHGVQTIYETFLGFSLAII 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                AT+   S  L   + P+L I Q+IPI+      +++F      K++   L   F 
Sbjct: 81  VGIALATVIDWSETLRKAIYPLLIISQTIPIIAVAPLLIIWFGYGLLPKILVVALVCFF- 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T ++      + R++  +  +      + F  + +P ++P     + ++  
Sbjct: 140 -------PITINLADGYRLVDREMIRLMSAMGAGPGRIFTMVKLPAALPFFFSGLRIA-- 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML---GVIFLYDQL 258
            G + V+ +   V+G+ +    G+G ++  + +      +  A++ +     +IFL  + 
Sbjct: 191 -GTYSVMGA---VIGEWLGASKGLGIFMTRSSQSYLTDRVFAAIILITCLSLLIFLIIEG 246

Query: 259 LFRPMIVWSNKFR 271
             R ++ W  + R
Sbjct: 247 AARLIMPWYYRQR 259


>gi|307128056|ref|YP_003880087.1| choline ABC transporter membrane-spanning permeaseer [Streptococcus
           pneumoniae 670-6B]
 gi|306485118|gb|ADM91987.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae 670-6B]
 gi|332072200|gb|EGI82685.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA17545]
          Length = 506

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|182684804|ref|YP_001836551.1| choline transporter [Streptococcus pneumoniae CGSP14]
 gi|182630138|gb|ACB91086.1| choline transporter [Streptococcus pneumoniae CGSP14]
          Length = 511

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 54  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 105

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 106 ITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 155

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 156 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 203



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 47  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 102

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 103 QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 162

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 163 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 203


>gi|84684432|ref|ZP_01012333.1| ABC transporter, inner membrane subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667411|gb|EAQ13880.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2654]
          Length = 272

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 8/228 (3%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +FW  +V          +    +     +     I +G  T++R VV +++A I+ + +G
Sbjct: 37  VFWELLVWVNGWPNYVMASPSDLPPAYAKYWGLFITMGWQTLWRTVVGLVLAVIVGLFLG 96

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +GF   +   + P      A P     P+V       H   N    L+    + + I 
Sbjct: 97  MIMGFSRLMRDALYPLLVGFNAIPKATVVPIVALMFVGEH---NFNTILMAFMISFFPIA 153

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +V  G S    +++++  +        +  I LP   P +      A   A+  + + E
Sbjct: 154 VSVSIGLSTLEPEYRDILRALGAKQATIFWKIALPKTLPEFFGALKVAVTLAFIGTNLME 213

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S         GLGA          +P +   ++ +    + L   +
Sbjct: 214 IVSPHGR-----GLGALFDSGKTNSDYPLMFAVLIALALLGIVLYYIV 256



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 88/265 (33%), Gaps = 18/265 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
              SR +   I  ++ F++   ++  +          P D+                  +
Sbjct: 19  ALTSRAVLAPIAAMVVFLVFWELLVWVNGWPNYVMASPSDLPPAYAKY--WGLFITMGWQ 76

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R +  +V++++       +   SR +   L P+L    +IP    +    + F+  +
Sbjct: 77  TLWRTVVGLVLAVIVGLFLGMIMGFSRLMRDALYPLLVGFNAIPKATVVPIVALMFVGEH 136

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      I   F    + +  S+   L  +  +  ++ R+        FW + +P 
Sbjct: 137 -------NFNTILMAFMISFFPIAVSVSIGLSTLEPEYRDILRALGAKQATIFWKIALPK 189

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P     + ++++  +      E++          G+G+         D   +   ++ 
Sbjct: 190 TLPEFFGALKVAVTLAFIGTNLMEIVS-----PHGRGLGALFDSGKTNSDYPLMFAVLIA 244

Query: 248 MLGVIFLYDQL---LFRPMIVWSNK 269
           +  +  +   +   L +    W+ +
Sbjct: 245 LALLGIVLYYIVVALEKIFAGWAER 269


>gi|168491824|ref|ZP_02715967.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae CDC0288-04]
 gi|183573879|gb|EDT94407.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae CDC0288-04]
          Length = 506

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|148993318|ref|ZP_01822858.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP9-BS68]
 gi|168489862|ref|ZP_02714061.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae SP195]
 gi|221232597|ref|YP_002511751.1| glycine/betaine ABC transporter [Streptococcus pneumoniae ATCC
           700669]
 gi|225857449|ref|YP_002738960.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae P1031]
 gi|298230333|ref|ZP_06964014.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254719|ref|ZP_06978305.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503585|ref|YP_003725525.1| ABC superfamily transporter membrane protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|147928085|gb|EDK79104.1| choline transporter (glycine betaine transport system permease
           protein) [Streptococcus pneumoniae SP9-BS68]
 gi|183571698|gb|EDT92226.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae SP195]
 gi|220675059|emb|CAR69637.1| ABC-type glycine betaine transport system protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225725436|gb|ACO21288.1| ABC transporter membrane-spanning permease - choline transporter
           [Streptococcus pneumoniae P1031]
 gi|298239180|gb|ADI70311.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|301794824|emb|CBW37280.1| ABC-type glycine betaine transport system protein [Streptococcus
           pneumoniae INV104]
 gi|332072684|gb|EGI83167.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA17570]
          Length = 506

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I   L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 T+I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLATLIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G        +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPSLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAT 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|304397344|ref|ZP_07379222.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304354962|gb|EFM19331.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 271

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 88/252 (34%), Gaps = 6/252 (2%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           +T     +     F ++     V+ ++ + W   V    I         ++    +    
Sbjct: 2   KTQNASPWINNPTFRKVLYPAVVAVVVILLWQGWVSYFNIPQFLVPSPVVMLQSLWTHCG 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T+   ++  +++ +I   V   +     I + + P+   L   P     PL+
Sbjct: 62  SLMTSLLFTLKITLISFLLSIVIGAVVAFVLVQNRFIETALFPYIVFLQVTPIVAIAPLI 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V    L+  +  +L+      + I+ N   G  +            H +  +    +
Sbjct: 122 IIWVKDTTLSLVVCSTLM----AVFPIISNTTQGLRSVSPGLLSYFQLNHASRLQILIRL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY+      + G +   ++V+E  +        TGL   I ++  +   P +  
Sbjct: 178 RIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGNNTGLAYQILQAGYQLDIPLMFA 235

Query: 558 GVLIMCCFVLAL 569
            +L++    +AL
Sbjct: 236 ALLLISLTGIAL 247



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 94/260 (36%), Gaps = 15/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R++       +  +L+     +    I +  VP  +V +  +     SL      T    
Sbjct: 16  RKVLYPAVVAVVVILLWQG-WVSYFNIPQFLVPSPVVMLQSLWTHCGSLMTSLLFTLKIT 74

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L + ++S++   V A +  ++R +   L P +  +Q  PI+      +++  +     V+
Sbjct: 75  LISFLLSIVIGAVVAFVLVQNRFIETALFPYIVFLQVTPIVAIAPLIIIWVKDTTLSLVV 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + L A+F I +        +  Q L ++   L    +    S  Q    L +P ++P  
Sbjct: 135 CSTLMAVFPIIS--------NTTQGLRSVSPGLLSYFQLNHASRLQILIRLRIPSALPYF 186

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM----LTM 248
              + +S        V +E +          G+   I  A  + D+  +  A+    LT 
Sbjct: 187 FGALRISSGLSLIGAVVAEFVAGTGGNNT--GLAYQILQAGYQLDIPLMFAALLLISLTG 244

Query: 249 LGVIFLYDQLLFRPMIVWSN 268
           + +      +  R +  W  
Sbjct: 245 IALFGAMSWISRRVLSAWHE 264


>gi|220920108|ref|YP_002495409.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219944714|gb|ACL55106.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 292

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 76/202 (37%), Gaps = 10/202 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +P  A  +   +     I +    +  T+A  SR    +L  +  +   +P +  L  
Sbjct: 86  GEIPAKALISLQTLAIGYGIGIALAAILTTIAIGSRIGTDLLETLTAMFNPLPAIALLPL 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S +W +  + +    ++   L  V  ++ L   +
Sbjct: 146 ALIWFGLGQG--------SVVFVLVHSVLWAIALNTHAGFRSVSNTLRMVGLNYGLRNLR 197

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P ++  + +  +  W  ++A+E++    +       G YI       + 
Sbjct: 198 LVRAILIPAAFPSILTGLKVGWAFAWRTLIAAELVFGVSSGSGGL--GWYIFENRNALET 255

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             +   + T++ +    + ++F
Sbjct: 256 TNVFAGLFTVILIGLFVENVVF 277



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 8/193 (4%)

Query: 383 GCITMFRVVVLIIIA-SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
             I++  + +   I  ++  I   I IG     +  ++    +    PA    PL +   
Sbjct: 92  ALISLQTLAIGYGIGIALAAILTTIAIG-SRIGTDLLETLTAMFNPLPAIALLPLALIWF 150

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +    +  +++    W I  N  AG  +  N  + V  ++ +   R  R I++P 
Sbjct: 151 GLGQGS----VVFVLVHSVLWAIALNTHAGFRSVSNTLRMVGLNYGLRNLRLVRAILIPA 206

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            FP  +TG       AW   I +E+             G YI E+        V  G+  
Sbjct: 207 AFPSILTGLKVGWAFAWRTLIAAELVFGVSSGSGGL--GWYIFENRNALETTNVFAGLFT 264

Query: 562 MCCFVLALNRFLW 574
           +    L +   ++
Sbjct: 265 VILIGLFVENVVF 277


>gi|148253996|ref|YP_001238581.1| putative alkanesulfonate ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146406169|gb|ABQ34675.1| putative alkanesulfonate ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 337

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++  + + + I + +    G++ G+ P IS  IQP  +L+   P     PL +      
Sbjct: 142 ASLVLLGLGMTIGASVGFLSGLFTGWSPRISYWIQPVLRLIGPIPTTALIPLALFLFPTT 201

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     L+   T + +     +G ++    + +VA +   +      +I +P   P
Sbjct: 202 FS----ASLFLLALATWFPVAVLTSSGVASVSTAYYDVARTLGASNRFLLLHIAIPASLP 257

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           +   G     G A    +V+E+           GLG Y+  +   G++  +   ++IM
Sbjct: 258 HVFVGLFMGLGHAIAVLVVAEMIG------VKAGLGYYLDWAQGWGAYGHLYAALIIM 309



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 14/228 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   + +  +        ++   P     +    +D   L +    + + +   M I   
Sbjct: 97  IAVLLTIWQVATAKTGYWRQPYFPPPQKIVEAYVVDHARLLESIRASLVLLGLGMTIGAS 156

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+       S R+   + P+L ++  IP    +   +  F   +         A++F 
Sbjct: 157 VGFLSGLFTGWSPRISYWIQPVLRLIGPIPTTALIPLALFLFPTTF--------SASLFL 208

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + +       + ++     +V+R+   S      ++ +P S+P +   + M + 
Sbjct: 209 LALATWFPVAVLTSSGVASVSTAYYDVARTLGASNRFLLLHIAIPASLPHVFVGLFMGLG 268

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
                +V +EMI V        G+G Y+  A        +  A++ M+
Sbjct: 269 HAIAVLVVAEMIGVKA------GLGYYLDWAQGWGAYGHLYAALIIMM 310


>gi|260430507|ref|ZP_05784480.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260418536|gb|EEX11793.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 290

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 20/237 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV----------LYVIWLGCITMFRVVV 392
            L +    +  G+        I       T+ D+           YV+     T   V+ 
Sbjct: 40  GLMVLILGIWFGLTATGLVSPIILPGPGETWDDIVFVGRNMVTGGYVLEAMWTTSRTVLY 99

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A+ +   +G+ +G        + P+   +   P   F PL ++ + +   +     
Sbjct: 100 AFALATTLGFSLGVLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGFGISSK---- 155

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L  F   + I+ +  AG  A   + + +  S   T  +    + LP   PY+ TG   
Sbjct: 156 VALATFIATFPIVVSTAAGLYAASENERMLFKSIGATRMQTLLRLKLPTGLPYFFTGLKI 215

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A  G    +I  E    G       G+GA I  S  + + P V   ++ +    LAL
Sbjct: 216 AAVGVMAGAITGEFLGGGE------GVGALIRVSASQLNTPRVFSLIIYLSFLGLAL 266



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 18/206 (8%)

Query: 65  ASRTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  TT R +L A  ++    F    L  +++     ++P L  + ++P + F    + + 
Sbjct: 89  AMWTTSRTVLYAFALATTLGFSLGVLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWL 148

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV  A   A F         +  S    L     +   + +S   +  Q    L
Sbjct: 149 GFGISSKVALATFIATF--------PIVVSTAAGLYAASENERMLFKSIGATRMQTLLRL 200

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P  +P     + ++  G     +  E +  G+      G+G+ I ++  + +   +  
Sbjct: 201 KLPTGLPYFFTGLKIAAVGVMAGAITGEFLGGGE------GVGALIRVSASQLNTPRVFS 254

Query: 244 AMLT---MLGVIFLYDQLLFRPMIVW 266
            ++    +   +FL    L R ++ W
Sbjct: 255 LIIYLSFLGLALFLMVVWLERTLVFW 280


>gi|88854366|ref|ZP_01129033.1| putative transporter [marine actinobacterium PHSC20C1]
 gi|88816174|gb|EAR26029.1| putative transporter [marine actinobacterium PHSC20C1]
          Length = 295

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 83/256 (32%), Gaps = 14/256 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVL 377
           R   P    +L  N   S         V+      +   +  Y++            D  
Sbjct: 30  RRFSPLATAKLKQNLSWSTWAPAVITFVIAAALWQVTAIANPYVIPTIDQVWLSLINDAD 89

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                  +T   V+V      I    + I +     +   I P   ++   P     P +
Sbjct: 90  TYWKNMLVTGLEVLVGASSGIIAGFILAIIMAEFQIMERAIMPLVVVVMVTPIVAIAPAL 149

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    +      +  +L++ F     +L N +AG     +   +V  + H + W  +R +
Sbjct: 150 VVAFGFGMTPKFIVTALVVFF----PMLVNSLAGLRDVDDRTLDVMKTLHASRWEIFRDL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
              G  PY   G   A   A   + V+E  + G       GLG+ +  +  + + P    
Sbjct: 206 RFTGSMPYVFAGLRIALPLAIVGAAVAEFVAAGQQ----AGLGSLVTIAAAQANLPVTWA 261

Query: 558 GVLIMCCFVLALNRFL 573
            + ++C   + L   L
Sbjct: 262 SIALLCLMGVILISML 277



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 19/268 (7%)

Query: 6   ILPPFISRRIFPNI-FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHS 60
              P  + ++  N+ +   A  ++  +I   L  +     P  I  I  + L    D  +
Sbjct: 31  RFSPLATAKLKQNLSWSTWAPAVITFVIAAALWQVTAIANPYVIPTIDQVWLSLINDADT 90

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
             +    T L +L      ++  F+ A + A+ + +   ++P++ ++   PI+      V
Sbjct: 91  YWKNMLVTGLEVLVGASSGIIAGFILAIIMAEFQIMERAIMPLVVVVMVTPIVAIAPALV 150

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V F      K I   L   F         M  +    L ++     +V ++   S W+ F
Sbjct: 151 VAFGFGMTPKFIVTALVVFF--------PMLVNSLAGLRDVDDRTLDVMKTLHASRWEIF 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L    SMP +   + +++         +E +  G       G+GS + +A  + +L  
Sbjct: 203 RDLRFTGSMPYVFAGLRIALPLAIVGAAVAEFVAAGQQA----GLGSLVTIAAAQANLPV 258

Query: 241 ILY--AMLTMLGVIFLYDQLLFRPMIVW 266
                A+L ++GVI +    L R  ++W
Sbjct: 259 TWASIALLCLMGVILISMLALVRKRVLW 286


>gi|304389468|ref|ZP_07371431.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315656714|ref|ZP_07909601.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|304327278|gb|EFL94513.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315492669|gb|EFU82273.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 269

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 86/260 (33%), Gaps = 12/260 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG--VAIGIAWQSIGYIVNHFTYQD 375
           R             L + +   ++ ++   WF       +   I  +    + +      
Sbjct: 9   RATPTFHAVSGFRPLNVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLS 68

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     T+       ++  I+ +P+   I     +++ +QPF     A PA    P
Sbjct: 69  GKTFWVCLGNTLLAAAGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAP 128

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +      P L +++L      + IL +   G         E A       W   R
Sbjct: 129 LLLIWLP----TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLR 184

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ +P + P  + G       +   ++V E+   G       G+G  I   +     P +
Sbjct: 185 YMEIPLVLPSLLGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGM 238

Query: 556 VLGVLIMCCFVLALNRFLWH 575
            + ++++C     +   ++ 
Sbjct: 239 FVSLIMICTVAALIYLGVYR 258



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 19/249 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           N+   L+  L+I  +  L              P D+V      L   +       T L  
Sbjct: 24  NVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLSGKTFWVCLGNTLLAA 83

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               V+ L+ +   +      R L   + P L   Q++P +      +++          
Sbjct: 84  AGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLLIWL--------P 135

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA          + +  S    L ++   + E ++      W    Y+ +P  +P L
Sbjct: 136 TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSL 195

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +   ++      V  EM++ G       G+G+ I L     D   +  +++ +  V 
Sbjct: 196 LGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGMFVSLIMICTVA 249

Query: 253 FLYDQLLFR 261
            L    ++R
Sbjct: 250 ALIYLGVYR 258


>gi|253574509|ref|ZP_04851850.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846214|gb|EES74221.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 256

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 87/241 (36%), Gaps = 15/241 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I+P +  ++ F+L+        H I++  +P  +           SL ++ + T   M  
Sbjct: 10  IWPPLVAVILFLLIWQGATAWFH-IEKWILPSPVDIGREAAAGAASLGEHTAATLRLMFI 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I  L   + A +      L   L P++ + Q++P +      +++F           
Sbjct: 69  GFAIGTLVGLLTAFVLHYVPFLKASLYPLIILSQNVPTIALAPLLMIWFG--------FG 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  I  I     + +T +    L    R + +  R    S    F  L VP+++P ++ 
Sbjct: 121 ILPKIIVITLVCFFPVTVAAMDGLSRTDRAMLDYMRMIGASKADIFRKLEVPYAIPSIMS 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ +      V +E I          GIG Y+ L         I  A+  ++ +   
Sbjct: 181 GVKIAATYSVMGAVIAEWIG------ADKGIGYYMMLQKASFRTDKIFVAIAIIVAISLA 234

Query: 255 Y 255
            
Sbjct: 235 M 235



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  + +   I +++ +     + + P + + + P   L    P     PL++    +
Sbjct: 60  AATLRLMFIGFAIGTLVGLLTAFVLHYVPFLKASLYPLIILSQNVPTIALAPLLMIWFGF 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   +++     + +    + G S       +       +    +R + +P   
Sbjct: 120 G----ILPKIIVITLVCFFPVTVAAMDGLSRTDRAMLDYMRMIGASKADIFRKLEVPYAI 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G   A   +   ++++E            G+G Y+          ++ + + I+ 
Sbjct: 176 PSIMSGVKIAATYSVMGAVIAEWIGADK------GIGYYMMLQKASFRTDKIFVAIAIIV 229

Query: 564 CFVLAL 569
              LA+
Sbjct: 230 AISLAM 235


>gi|104779443|ref|YP_605941.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108430|emb|CAK13124.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 287

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 106/265 (40%), Gaps = 15/265 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGII---NILLHGIQETTVPRDIVDIVPI--TLDVHSLPQY 64
            +++R++   +   A +L +       +  +   +  +P  +     +   L    LP  
Sbjct: 27  PVAQRLWQQGWLRKALILALLAGIWEAVARYTGNDLLLPSCLQTATALWDGLASGELPAK 86

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + + +L   V+ ++  F   +LA  ++    +L  +  +   +P +  L   +++F 
Sbjct: 87  VGVSLVVLLKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPLALLWFG 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + + IF +  S +W +  + Y     +   L    R++ L G +   ++ 
Sbjct: 147 LG--------DNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRLVLHIL 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     +   
Sbjct: 199 VPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAG 256

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  ++ +  L + L+F  +   + +
Sbjct: 257 LAVVILIGLLVEGLVFNTLERLTVR 281



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R   +I++P   P  ++G  
Sbjct: 152 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRLVLHILVPAALPSILSGLK 211

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 212 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEG 269

Query: 572 FLWHPLYLYGTRC 584
            +++ L     R 
Sbjct: 270 LVFNTLERLTVRR 282


>gi|312194252|ref|YP_004014313.1| ABC transporter permease [Frankia sp. EuI1c]
 gi|311225588|gb|ADP78443.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 279

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 17/258 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR  P    L+A +    +  ++             V    +     +L      T   +
Sbjct: 29  RRYGPAAVVLVAILAAWELATVVFGVEDYILPAPSAVVRALVDRWNGTLASATWVTLTEV 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I++    V A+    SR     L P L   Q++P++       + F      K+I
Sbjct: 89  LLGFAIAVAAGLVTASCLHFSRIARAALYPWLIGSQTVPVVVIAPVLAIIFGYTLTPKLI 148

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +  +    L  +  DL  + R+   S W  F  + +P ++P +
Sbjct: 149 LVALLCFF--------PIVVATLDGLAAVEPDLVRLMRTLYGSRWAIFRRVELPAALPSM 200

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TML 249
              + +S +      V       G+      G+G  +  A+ +     +  A+     M 
Sbjct: 201 FTGLRLSAAYAATAAV------FGEYSGSSDGLGHVMRQAVPQLQSALVFAAIALLSAMS 254

Query: 250 GVIFLYDQLLFRPMIVWS 267
             +F+   +L R ++ W+
Sbjct: 255 VALFVLVTVLERLLVGWA 272



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 24/253 (9%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--------------LYVI 380
               R+  +   +    V  VAI  AW+    +     Y                   + 
Sbjct: 19  GRQGRLVRVFRRYGPAAVVLVAILAAWELATVVFGVEDYILPAPSAVVRALVDRWNGTLA 78

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T+  V++   IA    +     + F     + + P+       P  V  P++   
Sbjct: 79  SATWVTLTEVLLGFAIAVAAGLVTASCLHFSRIARAALYPWLIGSQTVPVVVIAPVLAII 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             Y      + ++LL      + I+   + G +A   D   +  + + + W  +R + LP
Sbjct: 139 FGYTLTPKLILVALL----CFFPIVVATLDGLAAVEPDLVRLMRTLYGSRWAIFRRVELP 194

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P   TG   +   A  A++  E          + GLG  + ++  +     V   + 
Sbjct: 195 AALPSMFTGLRLSAAYAATAAVFGEY------SGSSDGLGHVMRQAVPQLQSALVFAAIA 248

Query: 561 IMCCFVLALNRFL 573
           ++    +AL   +
Sbjct: 249 LLSAMSVALFVLV 261


>gi|83749064|ref|ZP_00946070.1| Transporter [Ralstonia solanacearum UW551]
 gi|83724254|gb|EAP71426.1| Transporter [Ralstonia solanacearum UW551]
          Length = 613

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 25/243 (10%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTFVYA 87
              +         T   R    +   +  +   L +   R    + ++   ++L      
Sbjct: 380 FARVASQFLAGHGTPPARADAPVHAFSARLTDGLWRLTRRHLALVAASTGAAVLIGVPLG 439

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LAA+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +
Sbjct: 440 LLAAR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------AVPALIALTLYAL 491

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  +    L  +P  L + + +  L+  Q+   + +P ++P ++  +           
Sbjct: 492 LPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVILAGIKT--------- 542

Query: 208 VASEMIVVGDTVIPLP----GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             + +I VG   I       G G  IA  +   D  A L A      V+ L  Q  F   
Sbjct: 543 --AAVISVGTATIAAFIGAGGYGERIATGLALND-SATLLAGAIPAAVLALLVQGAFEAT 599

Query: 264 IVW 266
             W
Sbjct: 600 ERW 602



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 5/180 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V      A +I +P+G+    R  I   +     +L   P+     +++  V     
Sbjct: 421 LALVAASTGAAVLIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGA 479

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +  +T  +  R + LP   P  
Sbjct: 480 VPAL---IALTLYALLPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVI 536

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  TA   +   A+I + + + G+     TGL    + +   G+ P  VL +L+   F
Sbjct: 537 LAGIKTAAVISVGTATIAAFIGAGGYGERIATGLALNDSATLLAGAIPAAVLALLVQGAF 596


>gi|284045544|ref|YP_003395884.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949765|gb|ADB52509.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 273

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 77/258 (29%), Gaps = 21/258 (8%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY-IVNHFTYQDVLYVIW 381
           +R       L+            +     +  + +   W              DV   +W
Sbjct: 5   VRATRAGRGLRGWVGDNQRLTGILLRTMSIVVLLLVWEWYGSDPDHFATPPPSDVFPAMW 64

Query: 382 LGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            G            T+  V   + I+ ++ + +G+ I   P   + I P      A P  
Sbjct: 65  DGITSGRLIEATLGTLTTVFTGVGISIVLGVALGLAIALFPWARNTIDPLIDAAYAMPVT 124

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           +  P++              +   ++      I+ +   G    P D  E   +F + G 
Sbjct: 125 MLIPVIGVYTGLDFRGRVFIVITYVLLV----IVMSTATGVRDVPRDLMETGRAFGLRGR 180

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             WR ++LP    +  +G  T        ++ +E+            LGA I ES     
Sbjct: 181 ALWRAVVLPSASSHIASGVATGVARGMRGAVTAELLLIASD------LGALILESGAILD 234

Query: 552 FPEVVLGVLIMCCFVLAL 569
              ++  ++        L
Sbjct: 235 TRAMLAAIVWTLLMGYVL 252



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 89/228 (39%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T  P D+   +   +    L +    T   + + + IS++         A        + 
Sbjct: 53  TPPPSDVFPAMWDGITSGRLIEATLGTLTTVFTGVGISIVLGVALGLAIALFPWARNTID 112

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++D   ++P+   +    VY    + G+        +F + T  +  +  S    + ++
Sbjct: 113 PLIDAAYAMPVTMLIPVIGVYTGLDFRGR--------VFIVITYVLLVIVMSTATGVRDV 164

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           PRDL E  R+F L G   +  + +P +   +   +   ++ G    V +E++++      
Sbjct: 165 PRDLMETGRAFGLRGRALWRAVVLPSASSHIASGVATGVARGMRGAVTAELLLIASD--- 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
              +G+ I  +    D  A+L A++  L + ++       + R  + W
Sbjct: 222 ---LGALILESGAILDTRAMLAAIVWTLLMGYVLYSGALAVERRALRW 266


>gi|77463152|ref|YP_352656.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387570|gb|ABA78755.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 266

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 7/195 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++      +  A ++ IP+G  +G    +   +  F   LAA P   F PL++  +    
Sbjct: 73  SLLTYGTGLGAAVLVGIPLGALMGMVRLLGRTLDLFVFALAATPRVAFIPLIIVLLGLG- 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  ++++  G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+
Sbjct: 132 ---TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPF 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G           ++V+E+ +            A    +     +  +VL +  +   
Sbjct: 189 LVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADYFVIVLALAAIGVI 245

Query: 566 VLALNRFLWHPLYLY 580
           V    R L   L  +
Sbjct: 246 VTESLRLLEGRLSRW 260



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 11/208 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     ++ L   + +  ++L       L    R LG  L   +  + + P + F+  
Sbjct: 64  GRLQTAIGQSLLTYGTGLGAAVLVGIPLGALMGMVRLLGRTLDLFVFALAATPRVAFIPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V               A    +F   V  +  + Y  +     +L E++RS   S  +
Sbjct: 124 IIVLLGLG--------TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAAR 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P LV  + +  + G    V +E+      +  L    +      +  D 
Sbjct: 176 IQLHIVLPGALPFLVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADY 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             I+ A+  +  ++    +LL   +  W
Sbjct: 233 FVIVLALAAIGVIVTESLRLLEGRLSRW 260


>gi|195541996|gb|ACF98193.1| putative binding-protein-dependent transport systems inner membrane
           component [uncultured bacterium 1114]
          Length = 259

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 76/186 (40%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  +++ + I + + +  GI +G  P +S+ ++P      + P     PL++     
Sbjct: 65  ATTLTEMILGLAIGTTLGVLAGITLGRSPLLSTLLRPLIVAAYSVPLIALVPLIIMFFGI 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L   + +S+++ F     +LFN  +G  A   D          T    ++ +I P   
Sbjct: 125 DMLPKIVLISIVVFF----LLLFNTFSGVQAIDKDMIASIQIMGSTQREEFQKVIAPAAM 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + + G  TA   A  A+   E+ +        +G+G  +    ++   P +  G+L++ 
Sbjct: 181 AWIIGGVKTALPYALVAATTGEMLA------SRSGVGFLVMRGAQRFDMPALYAGLLVLM 234

Query: 564 CFVLAL 569
              L +
Sbjct: 235 IIGLLI 240



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 15/208 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + T   M+  + I      +      +S  L  +L P++    S+P++  +   +++F
Sbjct: 63  HVATTLTEMILGLAIGTTLGVLAGITLGRSPLLSTLLRPLIVAAYSVPLIALVPLIIMFF 122

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                       L  I  I     + + F+ +  +  I +D+    +    +  ++F  +
Sbjct: 123 GIDM--------LPKIVLISIVVFFLLLFNTFSGVQAIDKDMIASIQIMGSTQREEFQKV 174

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P +M  ++  +  ++          EM+          G+G  +    +  D+ A+  
Sbjct: 175 IAPAAMAWIIGGVKTALPYALVAATTGEMLA------SRSGVGFLVMRGAQRFDMPALYA 228

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            +L ++ +  L   +  R +  W  ++R
Sbjct: 229 GLLVLMIIGLLISDIATR-IEKWMLRWR 255


>gi|239626006|ref|ZP_04669037.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520236|gb|EEQ60102.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 261

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 10/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           +   W   V    I          V      +   ++    ITM    + ++        
Sbjct: 25  ILAVWQAAVSLGCIEGFMLPSPVQVLRTFISEFPILMDNAGITMAEAALGLLFGIATGFA 84

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             +++           P   L    PA    PL+V    Y          +L++  T + 
Sbjct: 85  AAVFMDRFERAYQAFYPIVVLTQTVPAVAMAPLLVLWFGYE----MTPKVILIVITTFFP 140

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   ++ G  +   D   +  +      + +RY+ LPG    + +    +   A   +++
Sbjct: 141 ITVGLLTGFKSADPDAVNLLRAMGAGRMQIFRYLKLPGAMNQFFSSLKISASYAVVGAVI 200

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           SE            GLG Y+    +  SF ++   + ++    L L R +
Sbjct: 201 SEWLGGFG------GLGVYMTRVRKAFSFDKMFAVIFLISVISLLLMRAV 244



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 16/249 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + I   I+   A   ++ +    + L  I+   +P  +  +     +   L   A  T  
Sbjct: 10  QNITSKIWSFSAAACILAVWQAAVSLGCIEGFMLPSPVQVLRTFISEFPILMDNAGITMA 69

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
                ++  +   F  A    +  R      PI+ + Q++P +      V++F      K
Sbjct: 70  EAALGLLFGIATGFAAAVFMDRFERAYQAFYPIVVLTQTVPAVAMAPLLVLWFGYEMTPK 129

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VI         I  +  + +T  +     +   D   + R+      Q F YL +P +M 
Sbjct: 130 VI--------LIVITTFFPITVGLLTGFKSADPDAVNLLRAMGAGRMQIFRYLKLPGAMN 181

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
               ++ +S S      V SE +          G+G Y+    K      +   +  +  
Sbjct: 182 QFFSSLKISASYAVVGAVISEWLGG------FGGLGVYMTRVRKAFSFDKMFAVIFLISV 235

Query: 251 VIFLYDQLL 259
           +  L  + +
Sbjct: 236 ISLLLMRAV 244


>gi|253756053|ref|YP_003029193.1| glycine/betaine ABC transporter [Streptococcus suis BM407]
 gi|251818517|emb|CAZ56347.1| ABC-type glycine betaine transport system protein [Streptococcus
           suis BM407]
          Length = 503

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                + +  +RL    + I  I Q+IP L  L   + +             L A+ A+ 
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIG--------TLPAVVALV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +       L  I   LEE + +F ++ W+K     +  +MP L+  +       
Sbjct: 89  IYAIFPILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIR------ 142

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                AS MI+   T   ++   G+GS+I L I   D   IL   ++   +  L+
Sbjct: 143 ----TASIMIIGTATLAALVGAGGLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +  +  ++        +    P+     L +  +    L   + L +  IF   
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIF--- 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL   + G        +E A++F +  W   +   L    P  ++G  TA       +
Sbjct: 94  -PILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++ +   G       GLG++I    ++     +++G +      +  
Sbjct: 153 TLAALVGAG-------GLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193


>gi|261408813|ref|YP_003245054.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261285276|gb|ACX67247.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 258

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 13/222 (5%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           V  + +    Q    ++  F   ++   ++   +T+   V    IA+I  + VG+ +   
Sbjct: 36  VSSLYLPAPSQVFRELLKLFGDGEIWKHLY---VTLAEFVAGYGIAAIGGLVVGMALVLI 92

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P      +P+   L A P     PL+   +     +       ++     + I  N + G
Sbjct: 93  PWAERFFRPYLSALMAIPKVTIVPLLALWLGIGITHK----ISIVFLFCFFTITVNTMTG 148

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                ++  +VA  F  T ++    +ILP   P        +       ++  E+ +   
Sbjct: 149 IKQTADNHLKVAKVFEATRYQTIMKVILPSAAPTIFAALRISAATGLVGALFGEMLASKD 208

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLG  + ++T   +  +    V ++    + +   +
Sbjct: 209 ------GLGNILVKATSLYNTAQAFAIVALVTVVSVLIISLI 244



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 78/241 (32%), Gaps = 18/241 (7%)

Query: 23  LAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
              ++++GI  +L+            P  +   +        + ++   T    ++   I
Sbjct: 18  ALLLVILGICEVLVRTETVSSLYLPAPSQVFRELLKLFGDGEIWKHLYVTLAEFVAGYGI 77

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + +   V                P L  + +IP +  +    ++       K+    L  
Sbjct: 78  AAIGGLVVGMALVLIPWAERFFRPYLSALMAIPKVTIVPLLALWLGIGITHKISIVFLFC 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I        T +    +     +  +V++ F  + +Q    + +P + P +   + +
Sbjct: 138 FFTI--------TVNTMTGIKQTADNHLKVAKVFEATRYQTIMKVILPSAAPTIFAALRI 189

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S + G    +  EM+   D      G+G+ +  A    +       +  +  V  L   L
Sbjct: 190 SAATGLVGALFGEMLASKD------GLGNILVKATSLYNTAQAFAIVALVTVVSVLIISL 243

Query: 259 L 259
           +
Sbjct: 244 I 244


>gi|110635867|ref|YP_676075.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286851|gb|ABG64910.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 253

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  + + +  AS++   +G+ IG  P          + L A P  V  PL V  + Y 
Sbjct: 57  ATLSLIGLSLAAASLVGFVLGLVIGTLPGFRHWTSLVLEYLRALPPPVIIPLAVLLLGYT 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     ++ F   W ++ N IAG S   N   +VA S  +T +     ++LP   P
Sbjct: 117 ----MTMKVSVIAFAAFWPVMLNTIAGVSQIHNLTFDVARSLRMTWFETLSKVVLPATIP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   A   +   ++V E+ +        +G+G+ +  +    +  EV   + +M  
Sbjct: 173 SLLLGIRIALPQSVVVTLVVEMFTGE------SGIGSLMIAAQRNFNAAEVFGLLAVMGL 226

Query: 565 FVLAL 569
           F   L
Sbjct: 227 FGYGL 231



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 17/232 (7%)

Query: 25  FVLVIGIINILLHGIQET---TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             LVI I      G +E+     P      +   +   +     + T   +  ++  + L
Sbjct: 12  LPLVIAIGVWQYAGDKESALFPPPATWWPAIADLIAADTFFPALNATLSLIGLSLAAASL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   +             +L+ ++++P    +   V+        KV          
Sbjct: 72  VGFVLGLVIGTLPGFRHWTSLVLEYLRALPPPVIIPLAVLLLGYTMTMKVS--------V 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  W +  +    +  I     +V+RS R++ ++    + +P ++P L+  + +++ 
Sbjct: 124 IAFAAFWPVMLNTIAGVSQIHNLTFDVARSLRMTWFETLSKVVLPATIPSLLLGIRIALP 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 +  EM           GIGS +  A +  +   +   +  M    +
Sbjct: 184 QSVVVTLVVEMFTGES------GIGSLMIAAQRNFNAAEVFGLLAVMGLFGY 229


>gi|118472663|ref|YP_884900.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118173950|gb|ABK74846.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
          Length = 277

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 16/259 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R   P    +      +   + +         A   +  S  +      +  +    
Sbjct: 16  PRRRTSTPSPGRRRVILHALQGGIVLSALAAWELGARSGSISSFLFGSPSAVWNVLYKRA 75

Query: 381 WLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
             G       +T   V++  ++ ++    +G+ + +   ++    PF   + + P     
Sbjct: 76  VSGELWSDIGVTSSEVILGFLVGAVGGSALGLLLWYSQFVADLTAPFIAAIGSIPVLAVA 135

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL +        +      +++ F      L    +GA     D   +  SF  T  + +
Sbjct: 136 PLTIIWFGTEMTSK----VVIVAFSCVVVSLTTSYSGARRTDPDLVNLMKSFGATRSQIF 191

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +++P    + V+G     G A   +IV E  S         G+G  I   +   +   
Sbjct: 192 RKLVVPSAMSWVVSGLKLNIGFALVGAIVGEYIS------SDAGVGHMILRGSSNFTITL 245

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+ G+ I+   VL  N  +
Sbjct: 246 VIAGIAIVMVMVLVFNILV 264



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 79/216 (36%), Gaps = 14/216 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  + +++        L      T+  ++   ++  +       L   S+ +  +  P 
Sbjct: 63  SPSAVWNVLYKRAVSGELWSDIGVTSSEVILGFLVGAVGGSALGLLLWYSQFVADLTAPF 122

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +  + SIP+L     T+++F      KV+    + +    T+         Y        
Sbjct: 123 IAAIGSIPVLAVAPLTIIWFGTEMTSKVVIVAFSCVVVSLTTS--------YSGARRTDP 174

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           DL  + +SF  +  Q F  L VP +M  +V  + +++       +  E I          
Sbjct: 175 DLVNLMKSFGATRSQIFRKLVVPSAMSWVVSGLKLNIGFALVGAIVGEYIS------SDA 228

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G  I        +  ++  +  ++ ++ +++ L+
Sbjct: 229 GVGHMILRGSSNFTITLVIAGIAIVMVMVLVFNILV 264


>gi|325068860|ref|ZP_08127533.1| binding-protein-dependent transport systems inner membrane
           component [Actinomyces oris K20]
          Length = 313

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 90/289 (31%), Gaps = 13/289 (4%)

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L RK +       +     + ++  +    R               + +         +
Sbjct: 23  DLLRKESTTPVAVLAGAWLTALIAWTLTARVRPASSAARSLTHFLPWINA---AGAWFIV 79

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +         +   + +   I+      D   ++     +    ++     S++    G+
Sbjct: 80  WQLTTSKLGLLTPPYFAAPEILIASFLGDWRLLLSCLGASALLFIIGYTAGSVLGFFTGL 139

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G+       + P  Q +   PA      ++              + ++ FG  + +  
Sbjct: 140 LMGWSRRADYWLHPLLQTVGPVPAAS----LLPLALLLLPTTYTSAAFIVGFGAWFPMAT 195

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              AG  +   D+ ++A +         R + +P   P  +TG  T  G +  A + +E+
Sbjct: 196 MTRAGIRSVRRDYIDMARTLGADELFLIRRVAVPSALPDMLTGLFTGLGTSLAALMTAEL 255

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                      GL  YI        +P + +G++I+  F   L   L+ 
Sbjct: 256 ------TGVDKGLAWYINWVKGWADYPRMYVGLIILVTFCRTLMVLLFK 298



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 83/270 (30%), Gaps = 21/270 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITL--DVHSL 61
           + P   + R   +    +       I+  L         P      +I+  +   D   L
Sbjct: 53  VRPASSAARSLTHFLPWINAAGAWFIVWQLTTSKLGLLTPPYFAAPEILIASFLGDWRLL 112

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 + L  +       +  F    L   SRR    L P+L  +  +           
Sbjct: 113 LSCLGASALLFIIGYTAGSVLGFFTGLLMGWSRRADYWLHPLLQTVGPV--------PAA 164

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + L    +     +A F +     + M       + ++ RD  +++R+          
Sbjct: 165 SLLPLALLLLPTTYTSAAFIVGFGAWFPMATMTRAGIRSVRRDYIDMARTLGADELFLIR 224

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP ++P ++  +   +      ++ +E+  V        G+  YI       D   +
Sbjct: 225 RVAVPSALPDMLTGLFTGLGTSLAALMTAELTGVDK------GLAWYINWVKGWADYPRM 278

Query: 242 LYAMLTMLGVIFLYDQLLFRP---MIVWSN 268
              ++ ++        LLF+    ++ W  
Sbjct: 279 YVGLIILVTFCRTLMVLLFKIRSSLLAWQQ 308


>gi|163857860|ref|YP_001632158.1| transmembrane permease ABC transporter protein [Bordetella petrii
           DSM 12804]
 gi|163261588|emb|CAP43890.1| probable transmembrane permease ABC transporter protein [Bordetella
           petrii]
          Length = 264

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   V+   I ++  +  G+W+G     S+ + P+ +   + P  +  P+        
Sbjct: 66  VTLAETVLAFFIGTVSGLGFGLWLGLSNTASAILDPYIKAANSMPRVILAPIFGMWFGLG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G         + A        +  R++ LP    
Sbjct: 126 IWSKVALAVTLVFFI----VFFNVYQGVREVSPTLLDNARMLGAGRRQLLRHVYLPSATS 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   T+ G A+  ++V E           +G+G  I ++        V  G++++  
Sbjct: 182 WVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTFDVNTVFAGIVVLTA 235

Query: 565 FVLALNRFL 573
           F L L+  +
Sbjct: 236 FALLLDYIV 244



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 75/225 (33%), Gaps = 17/225 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
              I    +    + ++   T    + A  I  +    +      S     +L P +   
Sbjct: 47  WGRIWAWFITNGDIYRHLWVTLAETVLAFFIGTVSGLGFGLWLGLSNTASAILDPYIKAA 106

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            S+P +       ++F      KV  A     F +F        F++YQ +  +   L +
Sbjct: 107 NSMPRVILAPIFGMWFGLGIWSKVALAVTLVFFIVF--------FNVYQGVREVSPTLLD 158

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R       Q   ++ +P +   +  ++  S+   +   V  E +          G+G 
Sbjct: 159 NARMLGAGRRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSAS------GVGY 212

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            I  A    D+  +   ++ +     L D ++    + ++ W  K
Sbjct: 213 LILQAEGTFDVNTVFAGIVVLTAFALLLDYIVGLGEQRLMKWQPK 257


>gi|146319254|ref|YP_001198966.1| periplasmic glycine betaine/choline-binding (lipo)protein of an ABC
           transporter (osmoprotectant binding protein)
           [Streptococcus suis 05ZYH33]
 gi|146321457|ref|YP_001201168.1| periplasmic glycine betaine/choline-binding (lipo)protein of an ABC
           transporter (osmoprotectant binding protein)
           [Streptococcus suis 98HAH33]
 gi|253752293|ref|YP_003025434.1| glycine/betaine ABC transporter [Streptococcus suis SC84]
 gi|253754119|ref|YP_003027260.1| glycine/betaine ABC transporter [Streptococcus suis P1/7]
 gi|145690060|gb|ABP90566.1| Periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system (osmoprotectant binding
           protein) [Streptococcus suis 05ZYH33]
 gi|145692263|gb|ABP92768.1| Periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system (osmoprotectant binding
           protein) [Streptococcus suis 98HAH33]
 gi|251816582|emb|CAZ52219.1| ABC-type glycine betaine transport system protein [Streptococcus
           suis SC84]
 gi|251820365|emb|CAR46942.1| ABC-type glycine betaine transport system protein [Streptococcus
           suis P1/7]
 gi|292558886|gb|ADE31887.1| putative osmoprotectant-binding protein [Streptococcus suis GZ1]
 gi|319758687|gb|ADV70629.1| periplasmic glycine betaine/choline-binding (lipo)protein of an
           ABC-type transport system (osmoprotectant binding
           protein) [Streptococcus suis JS14]
          Length = 503

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                + +  +RL    + I  I Q+IP L  L   + +             L A+ A+ 
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIG--------TLPAVVALV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +       L  I   LEE + +F ++ W+K     +  +MP L+  +       
Sbjct: 89  IYAIFPILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIR------ 142

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                AS MI+   T   ++   G+GS+I L I   D   IL   ++   +  L+
Sbjct: 143 ----TASIMIIGTATLAALVGAGGLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +  +  ++        +    P+     L +  +    L   + L +  IF   
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIF--- 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL   + G        +E A++F +  W   +   L    P  ++G  TA       +
Sbjct: 94  -PILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++ +   G       GLG++I    ++     +++G +      +  
Sbjct: 153 TLAALVGAG-------GLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193


>gi|332967757|gb|EGK06863.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Desmospora sp. 8437]
          Length = 218

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 79/189 (41%), Gaps = 19/189 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+++ +L       L +++ +   +++ I+ ++Q+ P L  L F +            
Sbjct: 27  LIAVLLGILVAIPLGILLSRAPKAAGLVMGIVGVVQTFPSLAILAFFIPILGVG------ 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+F   V  +  + Y  +  + + L E  R   ++GWQ+  Y+ VP +MP +
Sbjct: 81  --TVPAIVALFLYSVLPILRNTYTGIRGVNQGLLEAGRGMGMTGWQRIRYVEVPLAMPII 138

Query: 193 VWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +  + +S     GW  +          + I   G+G +I   +       I+   + +  
Sbjct: 139 MAGIRLSTVYLIGWATL---------ASFIGAGGLGDFIFNGLNLFRTDYIVAGAVPVTL 189

Query: 251 VIFLYDQLL 259
           +  + D  L
Sbjct: 190 LALVTDFFL 198



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +++  ++ IP+GI +   P  +  +     ++  FP+       +  +     
Sbjct: 23  LYISLIAVLLGILVAIPLGILLSRAPKAAGLVMGIVGVVQTFPSLAILAFFIPILGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G         E      +TGW+  RY+ +P   P  
Sbjct: 81  --TVPAIVALFLYSVLPILRNTYTGIRGVNQGLLEAGRGMGMTGWQRIRYVEVPLAMPII 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           +V G + +    
Sbjct: 139 MAGIRLSTVYLIGWATLASFIGAG-------GLGDFIFNGLNLFRTDYIVAGAVPVTLLA 191

Query: 567 LALNRFL 573
           L  + FL
Sbjct: 192 LVTDFFL 198


>gi|220918469|ref|YP_002493773.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956323|gb|ACL66707.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 489

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                + +  A+  ++L       LAA+  RLG +++ I+ ++Q++P L  L F +    
Sbjct: 293 TLEHLVLVAVALTGAILAAVPLGILAARRPRLGRLVLAIVGVVQTVPSLALLVFMIPLLG 352

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        AI A+F   +  +  + +  L  +  +L E + +  L    +   + 
Sbjct: 353 IGARP--------AIAALFLYGLLPIVRNTHAGLTGLAPELRESAEALGLPPLARLRRVE 404

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  S       V+      +G  ++   G G  I   I+   +  IL  
Sbjct: 405 LPLATPAILAGVKTS------AVITVGTATLG-ALVGAGGYGQPILTGIRLLSVPLILEG 457

Query: 245 MLTMLGVIFLYDQLL 259
            +    +      L 
Sbjct: 458 AVPAALLALGVQGLF 472



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V +  A +  +P+GI    RP +   +     ++   P+      ++  +     
Sbjct: 297 LVLVAVALTGAILAAVPLGILAARRPRLGRLVLAIVGVVQTVPSLALLVFMIPLLGIGAR 356

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      I+ N  AG +    + +E A +  +      R + LP   P  
Sbjct: 357 PAIAALFLYGLL----PIVRNTHAGLTGLAPELRESAEALGLPPLARLRRVELPLATPAI 412

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + +  +   G       G G  I       S P ++ G +      
Sbjct: 413 LAGVKTSAVITVGTATLGALVGAG-------GYGQPILTGIRLLSVPLILEGAVPAALLA 465

Query: 567 LALNRFL 573
           L +    
Sbjct: 466 LGVQGLF 472


>gi|121999135|ref|YP_001003922.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
 gi|121590540|gb|ABM63120.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
          Length = 274

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 15/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+   + ++     +   L            P +  +  IP L  L    
Sbjct: 72  LWLDTGASLGRLGMGVALAAAIGLLVGILNGCLPYARRTFSPFVTAVAMIPPLAVLPILF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           ELA +  I       +   + Q +  +PR+    +++   S WQ  
Sbjct: 132 IAFGVG--------ELAKVMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIV 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L+    +S+   W F++ASE I          G+G  I L  +  D+  
Sbjct: 184 LRVILPQTLPRLIDATRLSLGAAWLFLIASEAIA------ATEGLGYRIFLVRRYLDMET 237

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           IL  +  +  + FL+D L  R +  W
Sbjct: 238 ILPYVAWITLLAFLFD-LTLRGVNRW 262



 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + +A+ I + VGI  G  P+      PF   +A  P     P++      
Sbjct: 77  GASLGRLGMGVALAAAIGLLVGILNGCLPYARRTFSPFVTAVAMIPPLAVLPILFIAFGV 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +L++FG   +I+ ++       P +    A +   + W+    +ILP   
Sbjct: 137 GEL----AKVMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIVLRVILPQTL 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I SE  +       T GLG  I           ++  V  + 
Sbjct: 193 PRLIDATRLSLGAAWLFLIASEAIA------ATEGLGYRIFLVRRYLDMETILPYVAWIT 246

Query: 564 CFVLALN 570
                 +
Sbjct: 247 LLAFLFD 253


>gi|332558026|ref|ZP_08412348.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332275738|gb|EGJ21053.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 266

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 7/195 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++      +  A ++ IP+G  +G    +   +  F   LAA P   F PL++  +    
Sbjct: 73  SLLTYGTGLGAAVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLG- 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  ++++  G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+
Sbjct: 132 ---TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPF 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G           ++V+E+ +            A    +     +  +VL +  +   
Sbjct: 189 LVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADYFVIVLALAAIGVI 245

Query: 566 VLALNRFLWHPLYLY 580
           V    R L   L  +
Sbjct: 246 VTESLRLLEGRLSRW 260



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 11/208 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     ++ L   + +  ++L       L    R LG  L   +  + + P + F+  
Sbjct: 64  GRLQTAIGQSLLTYGTGLGAAVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V               A    +F   V  +  + Y  +     +L E++RS   S  +
Sbjct: 124 IIVLLGLG--------TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAAR 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P LV  + +  + G    V +E+      +  L    +      +  D 
Sbjct: 176 IQLHIVLPGALPFLVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADY 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             I+ A+  +  ++    +LL   +  W
Sbjct: 233 FVIVLALAAIGVIVTESLRLLEGRLSRW 260


>gi|228473306|ref|ZP_04058060.1| glycine betaine transport system permease protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275208|gb|EEK14006.1| glycine betaine transport system permease protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 513

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  LSA+V++ L   +     ++ R+    L+  ++++ +IP +  L        
Sbjct: 19  TVEHLLISLSAIVVASLIGVLLGIFISEYRKYAAWLLGAVNMLYTIPSIALL-------- 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +        L A+ A+    +  +  S Y  + +I   + E + +   + WQ  W + 
Sbjct: 71  GFFISITGVGNLTALIALILYALLPIIRSTYTGITHINPLIIEAAEAMGSTRWQLLWKIK 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +    L  
Sbjct: 131 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTLVG 183

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  +   +D  L +
Sbjct: 184 SVLIALLALGFDFFLAK 200



 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++     +  + + L    +   +  I++AS+I + +GI+I      ++ +     +L  
Sbjct: 4   LSTLLRDEAPFFLHLTVEHLLISLSAIVVASLIGVLLGIFISEYRKYAAWLLGAVNMLYT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+       +S     +L   + L L  +      I+ +   G +       E A +  
Sbjct: 64  IPSIALLGFFISITGVGNLTALIALILYALL----PIIRSTYTGITHINPLIIEAAEAMG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T W+    I LP   P  ++G         N   ++   +     +   GLG  I    
Sbjct: 120 STRWQLLWKIKLPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGI 172

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              +    ++G +++    L  + FL
Sbjct: 173 TTNNSAMTLVGSVLIALLALGFDFFL 198


>gi|66575093|gb|AAY50503.1| permease [Xanthomonas campestris pv. campestris str. 8004]
          Length = 286

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P          L    L +    +   +    V+ ++  FV   LAA +R    +L 
Sbjct: 63  LPSPWQTAQAFYTGLLSGELLRRVGTSLRVLAQGYVVGVVLAFVLTALAASTRWGRDLLG 122

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 123 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYARFQAV 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 175 PDTLRMAGRNYGLRGPRYVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 232

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G YI     E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 233 QGGLGWYIFQNRNELYTDRVFAGLAMVIALGLLVEGVVFQAIERLTVR 280



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 11/272 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L +     R+  P    +      +     +    V   + +   WQ+          
Sbjct: 20  PALLQVHAQARWQAPGWLRKALVLAVLVAAWYVAARVVADDLMLPSPWQTAQAFYTGLLS 79

Query: 374 QDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            ++L  +     T  RV+    ++  ++   +             +     +    PA  
Sbjct: 80  GELLRRVG----TSLRVLAQGYVVGVVLAFVLTALAASTRWGRDLLGTLTAMFNPLPAIA 135

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +        +    L  +++    W +     A   A P+  +    ++ + G R
Sbjct: 136 LLPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYARFQAVPDTLRMAGRNYGLRGPR 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           +   +++P   P  ++G       AW   I +E+           GLG YI ++  +   
Sbjct: 192 YVVQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYT 249

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             V  G+ ++    L +   ++  +     R 
Sbjct: 250 DRVFAGLAMVIALGLLVEGVVFQAIERLTVRR 281


>gi|294665684|ref|ZP_06730959.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292604526|gb|EFF47902.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 294

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    L +    +   +     + +L  FV   LAA +R    VL  +  +   +P + 
Sbjct: 84  GLLSGELLRRVDASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIA 143

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F             + +F +  S +W +  + Y     +P  L    R++ L
Sbjct: 144 LLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGL 195

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G +    L +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 196 RGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--GQGGLGWYIFQNRN 253

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 254 ELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVR 288



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L       R+  P    +      +    +I    V   + +  A Q+     +    
Sbjct: 28  PALVAATTPTRWQAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAGQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L  +     ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELLRRVD---ASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAVERLTVRR 289


>gi|92115060|ref|YP_574988.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91798150|gb|ABE60289.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 400

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  + +A+  +L        LA +S R+   L  +L++ Q+IP +      V    
Sbjct: 192 LLTHLGLVGAALGPALAIGVPLGLLAHRSARVRGTLFSVLNVFQTIPSIALFALLVAPLS 251

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AEL         AI A+    +  +  + +  L  +P    E +R   ++ 
Sbjct: 252 ALGNAFPFLAELGIKGIGAAPAIIALVMYALLPVVRNTHAGLKGVPPATVEAARGMGMTQ 311

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  W + +P ++P ++  + +         V +  + V   +I   G+G++I   + + 
Sbjct: 312 RQVLWRVEIPLALPVMLSGLRI-------VTVQAIGLTVVAALIGAGGLGAFIFQGLGQY 364

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L   +  + +  + D +L
Sbjct: 365 AIDLVLLGAIPTIVLAVIADFML 387



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 16/240 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGY--IVNHFTYQDVLYVIWLGCIT-MFRVVVLI 394
           +  S  +    +  + G A+     S  +  +     Y ++        +T +  V   +
Sbjct: 144 RHASGWITRLGYAALAGGAVAFLLASGHFRELSIMREYANIRDTFSDQLLTHLGLVGAAL 203

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452
             A  I +P+G+       +   +     +    P+   F L+V+ +S            
Sbjct: 204 GPALAIGVPLGLLAHRSARVRGTLFSVLNVFQTIPSIALFALLVAPLSALGNAFPFLAEL 263

Query: 453 ----------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      + ++      ++ N  AG    P    E A    +T  +    + +P  
Sbjct: 264 GIKGIGAAPAIIALVMYALLPVVRNTHAGLKGVPPATVEAARGMGMTQRQVLWRVEIPLA 323

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-TGLGAYIAESTEKGSFPEVVLGVLI 561
            P  ++G       A   ++V+ +   G +      GLG Y  +    G+ P +VL V+ 
Sbjct: 324 LPVMLSGLRIVTVQAIGLTVVAALIGAGGLGAFIFQGLGQYAIDLVLLGAIPTIVLAVIA 383


>gi|325914997|ref|ZP_08177328.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas vesicatoria ATCC 35937]
 gi|325538785|gb|EGD10450.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Xanthomonas vesicatoria ATCC 35937]
          Length = 294

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 92/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +    I   ++                   L    L +    +   +     + +L
Sbjct: 51  LVVLMAAWEIAARVVGDDLMLPSAWQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVL 110

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV   LAA +R    VL  +  +   +P +  L   +++F             + +F 
Sbjct: 111 LAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFV 162

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +P  L    R++ L G +    L +P ++P ++  + +  +
Sbjct: 163 LVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWA 222

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + ++F+
Sbjct: 223 FAWRTLIAAELVFGATS--GQGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQ 280

Query: 262 PMIVWSNK 269
            +   + +
Sbjct: 281 AIERLTVR 288



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L  T    R+  P    +      +    +I    V   + +  AWQ+     +    
Sbjct: 28  PALVATAAPARWRAPPWVRKALVLVVLMAAWEIAARVVGDDLMLPSAWQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAIERLTVRR 289


>gi|218529997|ref|YP_002420813.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218522300|gb|ACK82885.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 264

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 80/249 (32%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V   +   W     G AI         ++     Q+   ++
Sbjct: 1   MRRPLIQDPRVQAALPPLLVGIAVLSLWEAACRGFAIPEYLFPAPSVIAASLVQNGPDLL 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                TM   ++   +++++   V         I     P+A +L   P     PL++  
Sbjct: 61  RALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIIL 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V    +   +  +++ IF     ++ N   G  +       +   +  +  +    + +P
Sbjct: 121 VRDTQVALVICATIIAIF----PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRLRIP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               Y+  G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + 
Sbjct: 177 SALGYFFAGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALS 234

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 235 LITAAGILL 243



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  +T+R+ L A  +S +   + A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF         M  +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQVALVICATIIAIF--------PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITAAGILL 243


>gi|148557856|ref|YP_001257321.1| ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148369141|gb|ABQ62013.1| ABC transporter, permease protein [Brucella ovis ATCC 25840]
          Length = 263

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + +     + +   IT+   ++   I ++  + +G W   +P +++   P+ +   +
Sbjct: 48  LRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDPYVKAANS 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 108 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLSNARMLG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++  +  R + LP    +  +   TA G A   ++V E          + GLG  I ++ 
Sbjct: 164 MSERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLG------SSAGLGYLIHQAE 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G+L++  FVL ++           +W P
Sbjct: 218 GVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRP 255



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+           ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 41  ATPGDVALRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 101 YVKAANSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   +S  Q    + +P ++  +  ++  ++       V  E +         
Sbjct: 153 QTVLSNARMLGMSERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   ML +   + L D    ++ + ++VW  K
Sbjct: 208 -GLGYLIHQAEGVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRPK 256


>gi|126463361|ref|YP_001044475.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332559413|ref|ZP_08413735.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|126105025|gb|ABN77703.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332277125|gb|EGJ22440.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 254

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLII 395
           V     + +  +  G+     W +                    + +G  T++R V  + 
Sbjct: 9   VPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAYARYWELFLKMGWQTLWRTVAGLG 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A I    +G+ +GF       + P      A P     P++       H    + ++ L
Sbjct: 69  LAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQHDFNTVLMAFL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   + + I  +V  G S    +++++  S   +    +  I LP   P +      +  
Sbjct: 129 I---SFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPEFFGALKVSVT 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A+  + + E+ S         GLGA        G +P +   ++ +    + L
Sbjct: 186 LAFIGTNLVEIVSPHGR-----GLGALFKSGETNGDYPLMFAVLIALAFLGILL 234



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 18/261 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R+I   +  +L F+ +  GI+        +   P D+              +   +T  R
Sbjct: 5   RKIGVPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAYARY--WELFLKMGWQTLWR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++ + ++++F  +   +   SR     L P+L    +IP    +    + F+  +    
Sbjct: 63  TVAGLGLAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQH---- 118

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +   +   F    + +  S+   L  +  +  ++ RS   S    FW + +P ++P 
Sbjct: 119 ---DFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPE 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + +S++  +      E++          G+G+         D   +   ++ +  +
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIVS-----PHGRGLGALFKSGETNGDYPLMFAVLIALAFL 230

Query: 252 IFLY---DQLLFRPMIVWSNK 269
             L       L R    W+ +
Sbjct: 231 GILLYYAVVALERIFAGWAER 251


>gi|312199687|ref|YP_004019748.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311231023|gb|ADP83878.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 298

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 92/260 (35%), Gaps = 26/260 (10%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW---------------QSIGYIVNH 370
             P + L + +  R+          VV  V +  A+                   Y+   
Sbjct: 26  RSPGSLLLVTALARLGRTFGQVLASVVVIVILWYAFLKVFHLNPLVAKDPKAVYHYLFTV 85

Query: 371 FTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               +  +VI+ G + T+   +   +  ++  I V +       +     P A +L + P
Sbjct: 86  PKAHEHRHVIFHGLLETLLDALYGYVAGTVAAIVVSVLFVLYRPVEQAFLPVAMVLRSVP 145

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++        +   +   +++ F      L N++ G  + P    ++ +++  +
Sbjct: 146 LVAMTPIITLVFGRAVMGVTVIAGIVVFF----PSLVNIVFGLRSTPKAAADLVTAYGGS 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            +   R + +P   P     A  A  GA   ++++E  + G        LG Y+  S + 
Sbjct: 202 PFTVLRKVAIPSALPALFASARIAVPGAIIGALLAEWLATGKA------LGYYMEHSQQV 255

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
             +  V   V+++    +AL
Sbjct: 256 FDYGGVWASVIVITAVSVAL 275



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 74/191 (38%), Gaps = 14/191 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T L  L   V   +   V + L    R +    +P+  +++S+P++       + F 
Sbjct: 99  LLETLLDALYGYVAGTVAAIVVSVLFVLYRPVEQAFLPVAMVLRSVPLVAMTPIITLVFG 158

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V+G  + A   +F   + N+ F     L + P+   ++  ++  S +     + 
Sbjct: 159 RA----VMGVTVIAGIVVFFPSLVNIVF----GLRSTPKAAADLVTAYGGSPFTVLRKVA 210

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L  +  +++ G     + +E +  G        +G Y+  + +  D   +  +
Sbjct: 211 IPSALPALFASARIAVPGAIIGALLAEWLATGKA------LGYYMEHSQQVFDYGGVWAS 264

Query: 245 MLTMLGVIFLY 255
           ++ +  V    
Sbjct: 265 VIVITAVSVAL 275


>gi|188580360|ref|YP_001923805.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343858|gb|ACB79270.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 264

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 81/242 (33%), Gaps = 6/242 (2%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
                       V  ++   W     G AI         ++     Q+   ++     T+
Sbjct: 8   DPRVQAALPPLLVGILVLGLWEAACRGFAIPDYLFPAPSVIAASLVQNGPDLLRALWSTL 67

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              ++   +++++   V         I     P+A +L   P     PL++  V    + 
Sbjct: 68  RVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILVRDTQVA 127

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +  +++ IF     ++ N   G  +       +   +  +  +    + +P    Y+ 
Sbjct: 128 LVICATIIAIF----PVISNTTVGLRSVDPGLSNLMRVYRASRMQTLLRLRIPSALGYFF 183

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + ++    +
Sbjct: 184 AGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALSLITLAGI 241

Query: 568 AL 569
            L
Sbjct: 242 LL 243



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 11/192 (5%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  +TLR+ L A  +S +   + A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTLRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF + +        +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQVALVICATIIAIFPVIS--------NTTVGLRSVDPGLSNLMRVYRASRMQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITLAGILL 243


>gi|116249198|ref|YP_765039.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253848|emb|CAK12243.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 283

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 22/257 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            +  +L  F +  +F   + L+A V+V+  + + L       +      ++        L
Sbjct: 35  LIEAVLSGFEALLLFVPPYGLIAMVVVLAFVAVGLRAAILAGLCLGFCLLM-------GL 87

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              + +T   +  A++IS+L  F    L ++ + L  ++ P+LD+MQ++P   +L   V+
Sbjct: 88  WTASMQTLSLVTVAVLISVLIAFPIGVLCSRHKTLEAMVRPVLDVMQTVPPWVYLIPAVM 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F            + AI A     +  M      +   +PR+  E+  +         W
Sbjct: 148 IFSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPREFVELGSAIGAPPRSVLW 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   L+  +          ++ S  +VV   ++   G+G+ +   +   ++   
Sbjct: 200 KIEIPLARQTLLVGLNQ-------CILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEMGLG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A L ++ V  L D+L
Sbjct: 253 LRAGLAIVAVALLLDRL 269



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 60/171 (35%), Gaps = 6/171 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V     I    V+  VA+G+    +  +     +  ++ +      T+  V V ++I+ +
Sbjct: 50  VPPYGLIAMVVVLAFVAVGLRAAILAGLC--LGFCLLMGLWTASMQTLSLVTVAVLISVL 107

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I  P+G+       + + ++P   ++   P  V+    V   S   +   +   +  I  
Sbjct: 108 IAFPIGVLCSRHKTLEAMVRPVLDVMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI-- 165

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               +L       +  P +F E+ S+           I +P      + G 
Sbjct: 166 --PPMLRLTTLAFNQVPREFVELGSAIGAPPRSVLWKIEIPLARQTLLVGL 214


>gi|117928095|ref|YP_872646.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
 gi|117648558|gb|ABK52660.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
          Length = 276

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 10/216 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P              ++   W  VV   A     + IG + +                T+
Sbjct: 26  PWWCRPAVLRIAAGVLILAVWQFVVGSWAPHYVARPIGVVRDLPKVLTDNVFYHDLGSTL 85

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           F V+V ++IA +    +G+ +G    +   +  +   L A P     PL+     Y    
Sbjct: 86  FAVIVGLLIALVGGSLLGLVVGRLSDVQRVLGMYVSGLYAMPIIALVPLITVWFGYSATT 145

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 ++++      I+++V  GA A P    EV+  +    WR W  ++LP   PY +
Sbjct: 146 ----RLVVIVIEAGLPIVYSVAEGARAVPVMHIEVSRLYRAPWWRVWGGVVLPAAVPYVL 201

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            G   A G A   ++ +E  +         GLG Y+
Sbjct: 202 AGVDLAIGRALIGAVAAEFIA------AVHGLGYYV 231



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 87/220 (39%), Gaps = 16/220 (7%)

Query: 17  PNIFDLLAFVLVIGIINILL--HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           P +  + A VL++ +   ++          P  +V  +P  L  +        T   ++ 
Sbjct: 31  PAVLRIAAGVLILAVWQFVVGSWAPHYVARPIGVVRDLPKVLTDNVFYHDLGSTLFAVIV 90

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++I+L+   +   +  +   +  VL   +  + ++PI+  +    V+F      ++   
Sbjct: 91  GLLIALVGGSLLGLVVGRLSDVQRVLGMYVSGLYAMPIIALVPLITVWFGYSATTRL--- 147

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  I       + +S+ +    +P    EVSR +R   W+ +  + +P ++P ++ 
Sbjct: 148 -----VVIVIEAGLPIVYSVAEGARAVPVMHIEVSRLYRAPWWRVWGGVVLPAAVPYVLA 202

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            + +++       VA+E I        + G+G Y+   + 
Sbjct: 203 GVDLAIGRALIGAVAAEFIA------AVHGLGYYVLSHVN 236


>gi|240138299|ref|YP_002962771.1| putative permease component of ABC transporter [Methylobacterium
           extorquens AM1]
 gi|240008268|gb|ACS39494.1| putative permease component of ABC transporter [Methylobacterium
           extorquens AM1]
          Length = 264

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 80/249 (32%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V   +   W     G A+         ++     Q+   ++
Sbjct: 1   MRRPLIQDPRVQAALPPLLVGLAVLSLWEAACRGFAVPEYLFPAPSVIAASLVQNGPDLL 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                TM   ++   +++++   V         I     P+A +L   P     PL++  
Sbjct: 61  RALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIIL 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V    +   +  +++ IF     ++ N   G  +       +   +  +  +    + +P
Sbjct: 121 VRDTQVALVICATIIAIF----PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRLRIP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               Y+  G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + 
Sbjct: 177 SALGYFFAGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALS 234

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 235 LITAAGILL 243



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 85/252 (33%), Gaps = 12/252 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQ 63
             P     R+   +  LL  + V+ +      G            ++  +L  +   L +
Sbjct: 2   RRPLIQDPRVQAALPPLLVGLAVLSLWEAACRGFAVPEYLFPAPSVIAASLVQNGPDLLR 61

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               T    L A  +S +   + A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTMRVTLIAFALSTVLGTLVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF         M  +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQVALVICATIIAIF--------PMISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITAAGILL 243


>gi|298346827|ref|YP_003719514.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063]
 gi|298236888|gb|ADI68020.1| ABC superfamily ATP binding cassette transporter, membrane
           component [Mobiluncus curtisii ATCC 43063]
          Length = 267

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 86/260 (33%), Gaps = 12/260 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG--VAIGIAWQSIGYIVNHFTYQD 375
           R             L + +   ++ ++   WF       +   I  +    + +      
Sbjct: 7   RATPTFHAVSGFRPLNVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLS 66

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     T+       ++  I+ +P+   I     +++ +QPF     A PA    P
Sbjct: 67  GKTFWVCLGNTLLAAAGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAP 126

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  +      P L +++L      + IL +   G         E A       W   R
Sbjct: 127 LLLIWLP----TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLR 182

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y+ +P + P  + G       +   ++V E+   G       G+G  I   +     P +
Sbjct: 183 YMEIPLVLPSLLGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGM 236

Query: 556 VLGVLIMCCFVLALNRFLWH 575
            + ++++C     +   ++ 
Sbjct: 237 FVSLIMICTVAALIYLGVYR 256



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 19/249 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           N+   L+  L+I  +  L              P D+V      L   +       T L  
Sbjct: 22  NVIAPLSLALLIVAVWFLATSSGNIPTFILPRPSDVVSSGVELLSGKTFWVCLGNTLLAA 81

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               V+ L+ +   +      R L   + P L   Q++P +      +++          
Sbjct: 82  AGGTVLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLLIWL--------P 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              LA          + +  S    L ++   + E ++      W    Y+ +P  +P L
Sbjct: 134 TPRLAIAMLCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSL 193

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +   ++      V  EM++ G       G+G+ I L     D   +  +++ +  V 
Sbjct: 194 LGGIRNGVTLSITGAVVGEMVIGG------HGMGTLITLQSHNVDTPGMFVSLIMICTVA 247

Query: 253 FLYDQLLFR 261
            L    ++R
Sbjct: 248 ALIYLGVYR 256


>gi|114762765|ref|ZP_01442199.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114544675|gb|EAU47681.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601]
          Length = 254

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 80/232 (34%), Gaps = 13/232 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-----TMFRVVVLIIIA 397
           +  I  F ++    + +       + +     D     W   +     T++R V  + +A
Sbjct: 11  VGAIVIFLLLWEFLVWVNGWPNYVMASPSDLPDAYIRFWSLFVEGSWQTLWRTVAGLALA 70

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            I    +G+ +GF       + P      A P     P++       H   N    L+  
Sbjct: 71  VIFGTALGMVMGFSRIARDALYPLLVGFNAIPKATLVPVLALLFIGQH---NFNTVLMAF 127

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + + I  +V  G S    +++++  S   +    +R I LP   P +      +   A
Sbjct: 128 LISFFPIAVSVGIGLSTLEPEYRDILRSLGASRLTIFRKIALPKTLPEFFGALKVSVTLA 187

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +  + + E+ S         GLGA         ++P +   ++ +    + L
Sbjct: 188 FIGTNLVEIISPHGR-----GLGALFLSGQTNSNYPLMFAVLIALAVLGIIL 234



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 91/261 (34%), Gaps = 18/261 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++   +  ++ F+L+   +  +          P D+ D            + + +T  R
Sbjct: 5   QKVAVPVGAIVIFLLLWEFLVWVNGWPNYVMASPSDLPDAYIRF--WSLFVEGSWQTLWR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++ + ++++F      +   SR     L P+L    +IP    +    + F+  +    
Sbjct: 63  TVAGLALAVIFGTALGMVMGFSRIARDALYPLLVGFNAIPKATLVPVLALLFIGQH---- 118

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +   F    + +  S+   L  +  +  ++ RS   S    F  + +P ++P 
Sbjct: 119 ---NFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASRLTIFRKIALPKTLPE 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + +S++  +      E+I          G+G+         +   +   ++ +  +
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIIS-----PHGRGLGALFLSGQTNSNYPLMFAVLIALAVL 230

Query: 252 IFLY---DQLLFRPMIVWSNK 269
             +      +L +    W+ +
Sbjct: 231 GIILYYAVVMLEKIFAGWAER 251


>gi|46204032|ref|ZP_00209223.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 264

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 78/249 (31%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                              V   +   W     G AI         ++     Q+   ++
Sbjct: 1   MKTPLIQDPRVQAALPPLLVGIAVLSLWEVACRGFAIPDYLFPAPSVIAASLVQNGPDLM 60

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T+   ++   +++++   V         I     P+A +L   P     PL++  
Sbjct: 61  RALWSTIRVTLIAFALSTVLGTAVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIIL 120

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V     +  + L +       + ++ N   G  +       +   +  +  +    + +P
Sbjct: 121 VR----DTQIALVICATIIAIFPVISNTTVGLRSVDPGLVNLMRVYRASRLQTLLRLRIP 176

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
               Y+  G   + G A   ++V+E  +      R+ GL   I ++  +   P +   + 
Sbjct: 177 SALGYFFAGLRISSGLALIGAVVAEFVAG--TGGRSAGLAYEILQAGFQLDIPRMFAALS 234

Query: 561 IMCCFVLAL 569
           ++    + L
Sbjct: 235 LITAAGILL 243



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 65  ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  +T+R+ L A  +S +     A L  +SR +     P   ++Q  P++      ++  
Sbjct: 62  ALWSTIRVTLIAFALSTVLGTAVAFLFVQSRFIERGFFPYAVMLQVTPVVAVAPLIIILV 121

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +     VI A + AIF + +        +    L ++   L  + R +R S  Q    L
Sbjct: 122 RDTQIALVICATIIAIFPVIS--------NTTVGLRSVDPGLVNLMRVYRASRLQTLLRL 173

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++      + +S        V +E   V  T     G+   I  A  + D+  +  
Sbjct: 174 RIPSALGYFFAGLRISSGLALIGAVVAEF--VAGTGGRSAGLAYEILQAGFQLDIPRMFA 231

Query: 244 AMLTMLGVIFLY 255
           A+  +     L 
Sbjct: 232 ALSLITAAGILL 243


>gi|320093631|ref|ZP_08025515.1| hypothetical protein HMPREF9005_0127 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319979419|gb|EFW10897.1| hypothetical protein HMPREF9005_0127 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 280

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 89/277 (32%), Gaps = 23/277 (8%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI----------AW 361
            V++    L  +R   PE       ++    +  +     +    +G           AW
Sbjct: 3   GVRRAPGVLFAVRTRMPERDTVARGSKPRGALAVVAPLAFLAICLLGWWATTSATGIEAW 62

Query: 362 QS---IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +                         +T    +    I + + +P+   +     +S+ +
Sbjct: 63  RLPSPAAVAARAVQLAHNPQTWSRAAVTGGEALAGCAIGTAVALPLAYVVYRSRLVSAAV 122

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
           +PF     A PA    P+VV    Y  L+  L  +L++ F     IL + + G      +
Sbjct: 123 EPFLGATQALPAIAIAPIVVLWTGYGPLSVALLCALMVFF----PILVSSVVGLRHIDPE 178

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E A+    +G      + LP      + G       +   ++V E+   G      TG
Sbjct: 179 LLEAAALDGASGATMALTMELPLAAHSILGGLRNGFTLSVTGAVVGEMVMGG------TG 232

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           LG  + +         + + + ++C     L   ++ 
Sbjct: 233 LGQVLVQMRTNVDTAGMFVVIALLCLMATVLYAVIYR 269



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 14/247 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P  F  +  +      +           P  +                A+ T    L+
Sbjct: 37  VAPLAFLAICLLGWWATTSATGIEAWRLPSPAAVAARAVQLAHNPQTWSRAAVTGGEALA 96

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I        A +  +SR +   + P L   Q++P +      V++         +  
Sbjct: 97  GCAIGTAVALPLAYVVYRSRLVSAAVEPFLGATQALPAIAIAPIVVLWTGYGPLSVALLC 156

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F I  S V          L +I  +L E +     SG      + +P +   ++ 
Sbjct: 157 ALMVFFPILVSSV--------VGLRHIDPELLEAAALDGASGATMALTMELPLAAHSILG 208

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +    +      V  EM++ G       G+G  +       D   +   +  +  +  +
Sbjct: 209 GLRNGFTLSVTGAVVGEMVMGGT------GLGQVLVQMRTNVDTAGMFVVIALLCLMATV 262

Query: 255 YDQLLFR 261
              +++R
Sbjct: 263 LYAVIYR 269


>gi|83747933|ref|ZP_00944964.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207743460|ref|YP_002259852.1| cog0600, abc-type nitrate/sulfonate/bicarbonate transport system,
           permease component protein [Ralstonia solanacearum
           IPO1609]
 gi|83725351|gb|EAP72498.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206594857|emb|CAQ61784.1| cog0600, abc-type nitrate/sulfonate/bicarbonate transport system,
           permease component protein [Ralstonia solanacearum
           IPO1609]
          Length = 261

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +   +   +  G+W+   P  S+ + P+ +   + P  +  P+          +      
Sbjct: 72  LAFGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALAV 131

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L+ F     + FNV  G           A     +  +  R++ LP    +  +   T+
Sbjct: 132 TLVFFI----VFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSATSWVFSSLHTS 187

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN--- 570
            G A+  ++V E            G+G  I ++        V  G++++  F L L+   
Sbjct: 188 VGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLDWLV 241

Query: 571 RFLWHPLYLYGTR 583
             +   L  +  R
Sbjct: 242 GLVEKRLMRWQPR 254



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 19/210 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q+   T    + A               A S     VL P +    S+P +       V+
Sbjct: 61  QHLGVTLAETVLAF--GTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILAPIFGVW 118

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F      KV  A     F +F        F++YQ +  +   +   +R    S  Q   +
Sbjct: 119 FGLGIWSKVALAVTLVFFIVF--------FNVYQGVKEVSPVVLANARMLGASQRQLLRF 170

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   +  ++  S+   +   V  E +          G+G  I  A    D+  + 
Sbjct: 171 VYLPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SARGVGYLILQAEGTFDINTVF 224

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             ++ +     + D L+    + ++ W  +
Sbjct: 225 AGIVVLTVFALVLDWLVGLVEKRLMRWQPR 254


>gi|332637706|ref|ZP_08416569.1| glycine betaine ABC transporter periplasmic protein [Weissella
           cibaria KACC 11862]
          Length = 507

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 22/202 (10%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L  L A+VI+ +     A      RR G  ++ +  ++Q+IP L  L         L P
Sbjct: 24  ILLSLMAIVIATVIALPLAIALMNHRRAGEWVLQVAGVIQTIPSLAIL-------GALIP 76

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              IG   A I  +  + +  +  + Y  L  I   L E + +F LS   K + + +P +
Sbjct: 77  LVGIGTVPAVIALVLYA-IMPIFQNAYAGLTGIDPILLEAADAFGLSKRFKLFRVQLPLA 135

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILY 243
           +P ++  + ++M      ++ +  +        L    ++I L I+  +     + AIL 
Sbjct: 136 LPMIMSGLRIAM----VMIIGTATLAALIGGGGLG---TFIMLGIQTNNNAELLIGAILS 188

Query: 244 AMLTMLG--VIFLYDQLLFRPM 263
           A+L +     I L  +L  R +
Sbjct: 189 AVLALAFSWGIRLLSKLSVRRI 210



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I+IA++I +P+ I +         +   A ++   P+      ++  V    +   +
Sbjct: 28  LMAIVIATVIALPLAIALMNHRRAGEWVLQVAGVIQTIPSLAILGALIPLVGIGTVPAVI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  AG +       E A +F ++       + LP   P  ++G 
Sbjct: 88  ALVLYAIM----PIFQNAYAGLTGIDPILLEAADAFGLSKRFKLFRVQLPLALPMIMSGL 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A        I +   +             +I    +  +  E+++G ++     LA 
Sbjct: 144 RIAM----VMIIGTATLAALIGGGGLG---TFIMLGIQTNNNAELLIGAILSAVLALAF 195


>gi|311103869|ref|YP_003976722.1| binding-protein-dependent transporter inner membrane component
           family protein 8 [Achromobacter xylosoxidans A8]
 gi|310758558|gb|ADP14007.1| binding-protein-dependent transport system inner membrane component
           family protein 8 [Achromobacter xylosoxidans A8]
          Length = 278

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +        +   L ++   T    L    +S+    V A     S  L  VL 
Sbjct: 64  TSYPSALWPTFIELWNNGQLGKHIMTTLSATLVGFGLSMAIGIVVAAALWWSDFLYKVLD 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P + F+    ++  + Y    +   +A    I           +Y     I
Sbjct: 124 PFLVVANAMPKIAFVPIFYLWLGSDYAVYGMAVAIAVFVTIMV---------IYAGFRGI 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +++ +F  S WQ    + +P S+P L+  + M++      V+      VG+    
Sbjct: 175 DLNKVKLAHTFGASRWQVLTKVVLPGSVPTLIAAVKMNIGLALVGVI------VGEFQSA 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  I    +   L  ++ A+  +  +  +   +++R     + ++
Sbjct: 229 DSGLGFLIMNGSQVFKLNIVMTAIAILALISSVMYLIVYRIEAAIARRY 277



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 11/211 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   +      T+   +V   ++  I I V   + +   +   + PF  +  A P   
Sbjct: 77  LWNNGQLGKHIMTTLSATLVGFGLSMAIGIVVAAALWWSDFLYKVLDPFLVVANAMPKIA 136

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F P+    +   +    + +++ +        +  + AG      +  ++A +F  + W+
Sbjct: 137 FVPIFYLWLGSDYAVYGMAVAIAVFV-----TIMVIYAGFRGIDLNKVKLAHTFGASRWQ 191

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LPG  P  +       G A    IV E  S        +GLG  I   ++    
Sbjct: 192 VLTKVVLPGSVPTLIAAVKMNIGLALVGVIVGEFQS------ADSGLGFLIMNGSQVFKL 245

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             V+  + I+      +   ++        R
Sbjct: 246 NIVMTAIAILALISSVMYLIVYRIEAAIARR 276


>gi|307316429|ref|ZP_07595872.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306897627|gb|EFN28370.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 244

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 89/230 (38%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + +     +   +LP +   T  R++ A V +++       L  +   +   L 
Sbjct: 27  LPQPWALWEPFVQAVSSGALPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLD 86

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P L  +    ++            E AAI A+  +++ N+   + +    +
Sbjct: 87  PWLVVFLNLPALVLIVLCYIWIGLN--------ETAAITAVVLNKIPNVATLLREGARAL 138

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL+ ++  +R+    +  ++ +P   P +       ++  W  V+  E +        
Sbjct: 139 DPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAVIWKIVLVVEFLG------R 192

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             GIG  I    +  ++  +L   L+ +GV+ L +    +P      ++R
Sbjct: 193 SSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAERRVRRWR 242



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 14/208 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +T++RV+   + A +I + +G  +G    +   + P+  +    PA V   L  
Sbjct: 46  LPYHLGMTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCY 105

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +              ++      +   +  GA A   D   +A+ + +      R++I
Sbjct: 106 IWIGL----NETAAITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVI 161

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P+    A +     W   +V E         R++G+G  I    +  +   V++ 
Sbjct: 162 MPQLAPFIAAAARSGIAVIWKIVLVVEFLG------RSSGIGFQIHFYFQLFNVAMVLVY 215

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            L     +L +  F   P      R +R
Sbjct: 216 ALSFIGVMLLVEAFFLQP----AERRVR 239


>gi|229823438|ref|ZP_04449507.1| hypothetical protein GCWU000282_00736 [Catonella morbi ATCC 51271]
 gi|229787213|gb|EEP23327.1| hypothetical protein GCWU000282_00736 [Catonella morbi ATCC 51271]
          Length = 292

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 94/263 (35%), Gaps = 10/263 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             ++ L R   V        + +          L   W        +          V  
Sbjct: 21  WVLRILNRKETVTIKQRVHRWFESSVAWLTGLGLLALWEVTARLGMLPRFIIPAPSAVLA 80

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +QD   +     +T+ +  + + I  ++   + + +     +   + P   +    P 
Sbjct: 81  AIWQDAPNLWRNSRVTLIQAFIGLGIGIVLAFMLAVIMDRFKWVHRALYPLLIVSQTVPT 140

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P++V  + Y          +L++  T + I+ ++++G +    D  ++ +    + 
Sbjct: 141 VAIAPILVLALGYE----MTPKIVLVVLTTIFPIIMSILSGFAHCDQDALQLLNMMGASH 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+  RY+ +P    ++ +G   +   A+ +S+V+E            GLG Y+ ++ +  
Sbjct: 197 WQTLRYVKIPTSLHFFFSGLKVSVSYAFVSSVVAEWLGGFE------GLGVYMIQTKKAF 250

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           ++ ++   + ++    L     +
Sbjct: 251 AYDKMFAVIFLISALSLIFMGLV 273



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 99/252 (39%), Gaps = 22/252 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASRTTLRMLSAMV 77
           +A++  +G++ +     +   +PR I+      L     D  +L + +  T ++    + 
Sbjct: 46  VAWLTGLGLLALWEVTARLGMLPRFIIPAPSAVLAAIWQDAPNLWRNSRVTLIQAFIGLG 105

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I ++  F+ A +  + + +   L P+L + Q++P +      V+        K       
Sbjct: 106 IGIVLAFMLAVIMDRFKWVHRALYPLLIVSQTVPTVAIAPILVLALGYEMTPK------- 158

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  +  + ++ +  S+     +  +D  ++      S WQ   Y+ +P S+      + 
Sbjct: 159 -IVLVVLTTIFPIIMSILSGFAHCDQDALQLLNMMGASHWQTLRYVKIPTSLHFFFSGLK 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFL 254
           +S+S  +   V +E +          G+G Y+     A     + A+++ +  +  +   
Sbjct: 218 VSVSYAFVSSVVAEWLGG------FEGLGVYMIQTKKAFAYDKMFAVIFLISALSLIFMG 271

Query: 255 YDQLLFRPMIVW 266
              L+ R  + W
Sbjct: 272 LVALIERLALPW 283


>gi|114761146|ref|ZP_01441061.1| putative transporter [Pelagibaca bermudensis HTCC2601]
 gi|114545394|gb|EAU48396.1| putative transporter [Roseovarius sp. HTCC2601]
          Length = 282

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+  ++V   +A ++   +GI +G          PF       P     PL +  + + 
Sbjct: 87  ITVTEILVGFGLAVVVGAGLGILLGRSKLFERIASPFIVASQVTPKVALMPLFLLWMGFG 146

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    + LL    + + ++   I G  +  ++ +++ +      W+    + +P + P
Sbjct: 147 MQSKIAMVVLL----SFFPVMKATILGVRSIGSEQRDLFTVIRAPVWKRLLSLDVPAVLP 202

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y +TG  TA   A   +IV E            GLGA +  +       ++   ++ +  
Sbjct: 203 YLLTGIETASVLAVTGAIVGEYLGG------NEGLGAMVVMTLNAMRVDQMFATIVALAI 256

Query: 565 FVLAL 569
           F    
Sbjct: 257 FGFLF 261



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 88/235 (37%), Gaps = 15/235 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVISL 80
           LLAF+ +  +  ++L        P + V +  + L          R T   +L    +++
Sbjct: 41  LLAFIALWKLYVVVLDISPFMLPPPEAVALALVELLQEPFFWNFFRITVTEILVGFGLAV 100

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L  +S+    +  P +   Q  P +  +   +++       K+    L + F
Sbjct: 101 VVGAGLGILLGRSKLFERIASPFIVASQVTPKVALMPLFLLWMGFGMQSKIAMVVLLSFF 160

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  + +          + +I  +  ++    R   W++   L VP  +P L+  +  + 
Sbjct: 161 PVMKATI--------LGVRSIGSEQRDLFTVIRAPVWKRLLSLDVPAVLPYLLTGIETA- 211

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V+A    +VG+ +    G+G+ + + +    +  +   ++ +    FL+
Sbjct: 212 -----SVLAVTGAIVGEYLGGNEGLGAMVVMTLNAMRVDQMFATIVALAIFGFLF 261


>gi|223933132|ref|ZP_03625124.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptococcus suis 89/1591]
 gi|330833225|ref|YP_004402050.1| glycine betaine ABC transporter substrate-binding protein
           [Streptococcus suis ST3]
 gi|223898193|gb|EEF64562.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptococcus suis 89/1591]
 gi|329307448|gb|AEB81864.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptococcus suis ST3]
          Length = 503

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                + +  +RL    + I  I Q+IP L  L   + +             L A+ A+ 
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIG--------TLPAVVALV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +       L  I   LEE + +F ++ W+K     +  +MP L+  +       
Sbjct: 89  IYAIFPILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIR------ 142

Query: 204 WFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                AS MI+   T   ++   G+GS+I L I   D   IL   ++   +  L+
Sbjct: 143 ----TASIMIIGTATLAALVGAGGLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ +  +  ++        +    P+     L +  +    L   + L +  IF   
Sbjct: 37  VPLGLILSSKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIF--- 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL   + G        +E A++F +  W   +   L    P  ++G  TA       +
Sbjct: 94  -PILQGTLTGLGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++ +   G       GLG++I    ++     +++G +      +  
Sbjct: 153 TLAALVGAG-------GLGSFILLGIDRNDSALILIGAVSSAVLAVLF 193


>gi|297624474|ref|YP_003705908.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297165654|gb|ADI15365.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 274

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 10/169 (5%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A I+ + + + I     +   + P+       P     PL++    +  L      
Sbjct: 59  GFALALIVGVSLALLIDLSTTLRRALYPWLVASRTVPIVALAPLMLIWFGFGLL----PK 114

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            LL+ F   + I      G +    +  +V  S   +  +   +   P   P   +G   
Sbjct: 115 VLLVAFFCFFPIAVATTDGLARTDPELLKVFRSVRASRTQTLWWARWPSALPSLFSGVRI 174

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           A   + +A+I +E            GLG  I  +    + P V   +++
Sbjct: 175 AAAYSVSAAIFAEYVGG------FAGLGVLIQSAANARATPLVFAAIVV 217



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 19/218 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T L+ L    ++L+     A L   S  L   L P L   +++PI+      +
Sbjct: 45  LAHHTLTTLLQTLLGFALALIVGVSLALLIDLSTTLRRALYPWLVASRTVPIVALAPLML 104

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F            L  +  +     + +  +    L     +L +V RS R S  Q  
Sbjct: 105 IWFGFGL--------LPKVLLVAFFCFFPIAVATTDGLARTDPELLKVFRSVRASRTQTL 156

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W+   P ++P L   + ++ +      + +E +          G+G  I  A   +    
Sbjct: 157 WWARWPSALPSLFSGVRIAAAYSVSAAIFAEYVGG------FAGLGVLIQSAANARATPL 210

Query: 241 ILYAMLTMLGV---IFLYDQLLFRPMIVWSNKFRLERT 275
           +  A++         F    +L R  + W  ++R ERT
Sbjct: 211 VFAAIVVTACASWCFFALVGVLERRALPW--RYRKERT 246


>gi|269798733|ref|YP_003312633.1| substrate-binding region of ABC-type glycine betaine transporter
           [Veillonella parvula DSM 2008]
 gi|269095362|gb|ACZ25353.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Veillonella parvula DSM 2008]
          Length = 510

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 70/187 (37%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A V++++   +   L  + +RL   ++ +++ + +IP +  L   +            
Sbjct: 27  VLASVVAIIIGGLLGVLIYEYKRLAAPVMVMVNFLYTIPSISMLGLLLYVSGVGNT---- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + +  L  I + + E   +  L+  Q+ W + +P +MP +
Sbjct: 83  ----TAIIALVIYALLPMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I        +   L +  + 
Sbjct: 139 MAGIRT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLA 191

Query: 253 FLYDQLL 259
              D L 
Sbjct: 192 ITVDALF 198



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 16/197 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  ++A II   +G+ I     +++ +      L   P+     L++      +    +
Sbjct: 27  VLASVVAIIIGGLLGVLIYEYKRLAAPVMVMVNFLYTIPSISMLGLLLYVSGVGNTTAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E   +  +T  +    I +P   P  + G 
Sbjct: 87  ALVIYALL----PMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         +++   +     +   GLG  I            + G L++    + ++
Sbjct: 143 RT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAITVD 195

Query: 571 RFLWHPLYLYGTRCLRL 587
                 L+  G R  R+
Sbjct: 196 -----ALFSLGERVTRI 207


>gi|197118115|ref|YP_002138542.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197087475|gb|ACH38746.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 295

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 87/216 (40%), Gaps = 15/216 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +   +++   I      + A  A  +R    ++  +      +P +  L  
Sbjct: 89  GELLGRVGHSLRTLVTGYAIGATLAALLAVAAYSTRFGNDLMEILTATFNPLPPIALLPV 148

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           ++++F           + + +F +  + +W M  + +     I   +  V R++ L+GW+
Sbjct: 149 SLIWFGLG--------QASIVFVLVHAVLWPMALNAHTGFTGITPTIRMVGRNYGLTGWR 200

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W +  P + P L+  + +  + GW  ++A+E++    +       G +I     + + 
Sbjct: 201 FAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSSGSGGI--GWFIYENKNQLET 258

Query: 239 LAILYAMLTMLGVIFLYDQLLF-----RPMIVWSNK 269
            ++   +LT++ +    + LLF     R ++ W  K
Sbjct: 259 ASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMK 294



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 6/163 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              +  ++         P     P+ +        +    +  +++    W +  N   G
Sbjct: 124 RFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQAS----IVFVLVHAVLWPMALNAHTG 179

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +      + V  ++ +TGWR+   I+ P  FP  +TG        W + I +E+     
Sbjct: 180 FTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVS 239

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                   G +I E+  +     V  G+L +    LA+   L+
Sbjct: 240 SGSGGI--GWFIYENKNQLETASVFAGLLTIILIGLAVENLLF 280


>gi|83945649|ref|ZP_00957995.1| Substrate-binding region and inner membrane component of
           ABC-typeglycine betaine transport system [Oceanicaulis
           alexandrii HTCC2633]
 gi|83851015|gb|EAP88874.1| Substrate-binding region and inner membrane component of
           ABC-typeglycine betaine transport system [Oceanicaulis
           alexandrii HTCC2633]
          Length = 517

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 13/202 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +LP Y        ++A++ +L  +     LAA++  +    + +  +MQ+IP L  L 
Sbjct: 9   IATLPAYLGGHMRLSVAALLAALAISLPLGILAARNPGVARPALGVASVMQTIPALALLA 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V     +           A FA+    V  +  +    L  +   + E +R   +S  
Sbjct: 69  LMVPLLGGMIG------FAPAFFALTLYGVLPVLRNTIVGLQGVDPVVREAARGVGMSTR 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P + P ++  +  +    W    A+    VG T      +G+YI   ++ + 
Sbjct: 123 QSLLRVELPLAAPTIIAGIRTA--TVWVVGAATLATPVGATS-----LGNYIFSGLQTRT 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
             A+++  L   G+  L DQL+
Sbjct: 176 WAAVIFGCLCSAGLALLLDQLI 197



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 9/169 (5%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI     P ++      A ++   PA     L+V  +    +        L ++G    +
Sbjct: 38  GILAARNPGVARPALGVASVMQTIPALALLALMVPLLG-GMIGFAPAFFALTLYGVL-PV 95

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L N I G        +E A    ++  +    + LP   P  + G  TA      A+ ++
Sbjct: 96  LRNTIVGLQGVDPVVREAARGVGMSTRQSLLRVELPLAAPTIIAGIRTATVWVVGAATLA 155

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    +  T LG YI    +  ++  V+ G L      L L++ +
Sbjct: 156 -------TPVGATSLGNYIFSGLQTRTWAAVIFGCLCSAGLALLLDQLI 197


>gi|262195262|ref|YP_003266471.1| binding-protein-dependent transporters inner membrane component
           [Haliangium ochraceum DSM 14365]
 gi|262078609|gb|ACY14578.1| binding-protein-dependent transport systems inner membrane
           component [Haliangium ochraceum DSM 14365]
          Length = 275

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T   V +    A+++ +   + + +   +   + PF   L   P     P++V
Sbjct: 71  LLRATAVTTLSVAIGFGAATVLGVATAVVLAWSRLLERALYPFTVFLQTVPLVAIAPMLV 130

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +          +S+       + ++ N + G  + P    E+ + +  +  +  R + 
Sbjct: 131 LWLDPG----VPAVSVCAFIVCLFPVITNTLIGIRSIPRAQVELFALYGASRLQTLRKLS 186

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           LPG  P  +TG   A G +   ++V E  +      +  G+
Sbjct: 187 LPGALPSILTGLRVAAGLSVIGAVVGEFVAGQMGTQQGLGI 227



 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 10/177 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L +  + TTL +      + +     A + A SR L   L P    +Q++P++      
Sbjct: 70  TLLRATAVTTLSVAIGFGAATVLGVATAVVLAWSRLLERALYPFTVFLQTVPLVAIAPML 129

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++     P   + A +  +F + T        +    + +IPR   E+   +  S  Q 
Sbjct: 130 VLWLDPGVPAVSVCAFIVCLFPVIT--------NTLIGIRSIPRAQVELFALYGASRLQT 181

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
              L +P ++P ++  + ++        V  E   V   +    G+G  + +A ++ 
Sbjct: 182 LRKLSLPGALPSILTGLRVAAGLSVIGAVVGEF--VAGQMGTQQGLGILVVVAARQS 236


>gi|108759782|ref|YP_631043.1| ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108463662|gb|ABF88847.1| ABC transporter, permease protein [Myxococcus xanthus DK 1622]
          Length = 260

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 10/214 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
             VP           +  SL   A  T    L    +S +   + A L A SR +   L 
Sbjct: 35  WLVPPPSAIGAAGAQEASSLLGAAVTTGRSALVGFGLSAVLGVLVAVLLASSRMVERALY 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    +Q++PI+      V++F             A   + F   ++ +  +    L ++
Sbjct: 95  PYTLFLQTVPIVAIAPLLVLWFGPG--------PRAVAVSSFIVSLFPVIANTLTGLRSV 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L ++ R +        W L +P +MP L   + ++        +  E   V      
Sbjct: 147 EPSLRDMFRLYGARRLATLWKLELPAAMPHLFTGLRIASGLAVIGAIVGEF--VAGFSEG 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  +  A ++     +  A+L   G+  + 
Sbjct: 205 TAGLGILVLAAYRQLRTDLLFAAVLAASGLGLVL 238



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 6/202 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     Q+   ++     T    +V   +++++ + V + +     +   + P+   L  
Sbjct: 43  IGAAGAQEASSLLGAAVTTGRSALVGFGLSAVLGVLVAVLLASSRMVERALYPYTLFLQT 102

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V           +   ++    + + ++ N + G  +     +++   + 
Sbjct: 103 VPIVAIAPLLVLWFGPGPRAVAVSSFIV----SLFPVIANTLTGLRSVEPSLRDMFRLYG 158

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    + LP   P+  TG   A G A   +IV E  +       T GLG  +  + 
Sbjct: 159 ARRLATLWKLELPAAMPHLFTGLRIASGLAVIGAIVGEFVAG--FSEGTAGLGILVLAAY 216

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +     +   VL      L L
Sbjct: 217 RQLRTDLLFAAVLAASGLGLVL 238


>gi|225593160|gb|ACN96077.1| nitrate transport protein [Fischerella sp. MV11]
          Length = 191

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 27/196 (13%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     ++  + V  I A++  I +G  IG  P +    +   Q+  + P   F PL 
Sbjct: 4   SILLNFLSSLQLLFVGFIPAAVAGILLGSAIGINPLLYQLCKRLLQIPYSIPPIAFVPLA 63

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                       +  S+++ F   W ++ N   G                   +R     
Sbjct: 64  FIFFK----EVEVAASIVVFFSAIWAVIINTATGMRKSR---------LQDNNFRV---- 106

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                  Y      T    AW   I  E+ + G       GLG  I      G++ +++ 
Sbjct: 107 ----AINYIFDALRTGLWIAWFTVIAIEMLTIG------RGLGFLIWNGYRGGNYNKIIE 156

Query: 558 GVLIMCCFVLALNRFL 573
           G++ +      L++ L
Sbjct: 157 GLIYIGTIGFLLDQLL 172



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 31/194 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   +    + + +   +  +    +  L  +   +L I  SIP + F+    ++F  
Sbjct: 10  LSSLQLLFVGFIPAAVAGILLGSAIGINPLLYQLCKRLLQIPYSIPPIAFVPLAFIFFKE 69

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    E+AA   +F S +W +  +    +                    +      
Sbjct: 70  --------VEVAASIVVFFSAIWAVIINTATGMRK-----------------SRLQDNNF 104

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
             ++  +   +   +   WF V+A EM+ +G       G+G  I    +  +   I+  +
Sbjct: 105 RVAINYIFDALRTGLWIAWFTVIAIEMLTIG------RGLGFLIWNGYRGGNYNKIIEGL 158

Query: 246 LTMLGVIFLYDQLL 259
           + +  + FL DQLL
Sbjct: 159 IYIGTIGFLLDQLL 172


>gi|270262547|ref|ZP_06190818.1| transporter [Serratia odorifera 4Rx13]
 gi|270043231|gb|EFA16324.1| transporter [Serratia odorifera 4Rx13]
          Length = 255

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 85/230 (36%), Gaps = 19/230 (8%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P        +      L  +   T   +   + I +L     A     S RL   L+P
Sbjct: 38  LLPSPSAVAQALWSGRAYLAYHTLITASEIACGLGIGVLLGAALALCMIYSPRLQRWLMP 97

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q+IP+       V++F      KV  A L   F         +T + +  L  + 
Sbjct: 98  LVLTSQAIPVFALAPLLVLWFGFGMSAKVAMAVLVIFF--------PVTSAFFDGLRRVN 149

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  +++R+   S W +  ++ +  ++P     + M+ +      VA    ++G+ V   
Sbjct: 150 NDYLDLARTMGASPWAQLRHVRLMAALPAFGSGLRMAAA------VAPIGAIIGEWVGSA 203

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY----DQLLFRPMIVWSN 268
            G+G  +  A           A+  ++ +  L     D LL R +I W+ 
Sbjct: 204 EGLGYVMLNANARMQTDVCFAALFILVLMTVLLWMTVDALLLR-LIDWAP 252



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 74/202 (36%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    +    Y+ +   IT   +   + I  ++   + + + + P +   + P      A
Sbjct: 45  VAQALWSGRAYLAYHTLITASEIACGLGIGVLLGAALALCMIYSPRLQRWLMPLVLTSQA 104

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V     + ++  + +++L+IF   + +      G     ND+ ++A +  
Sbjct: 105 IPVFALAPLLVLWFG-FGMSAKVAMAVLVIF---FPVTSAFFDGLRRVNNDYLDLARTMG 160

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W   R++ L    P + +G   A   A   +I+ E            GLG  +  + 
Sbjct: 161 ASPWAQLRHVRLMAALPAFGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLNAN 214

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +         + I+    + L
Sbjct: 215 ARMQTDVCFAALFILVLMTVLL 236


>gi|227495437|ref|ZP_03925753.1| binding-protein-dependent transport systems inner membrane
           component [Actinomyces coleocanis DSM 15436]
 gi|226830984|gb|EEH63367.1| binding-protein-dependent transport systems inner membrane
           component [Actinomyces coleocanis DSM 15436]
          Length = 249

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 15/204 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   ++  ++ + + +P+   I  R  I++ ++PF     A PA    PL+V  + Y
Sbjct: 59  AVTLLTAILGSLLGAGVALPLAYLIYRRRLIAAAVEPFLGATQAIPAIALAPLLVLWLGY 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L      SLL+ F     IL +   G      +  E A     +GW   R + +P   
Sbjct: 119 GLLPIVALCSLLVFF----PILVSTTVGFRHLDQEVLEAAVLDGASGWTLLRNMEVPLAL 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G       +   ++V E+   G+      GLGA +           + + + ++C
Sbjct: 175 PSILGGFRNGFTLSVTGAVVGELVMGGN------GLGAILTAQRNAVDTIGMFVTIALLC 228

Query: 564 CFVLALNRFLWHPLYLYGTRCLRL 587
              ++    ++     Y  R  ++
Sbjct: 229 TLAMSFYSVIY-----YTERRTKI 247



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 78/231 (33%), Gaps = 14/231 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             + N L         P+D  + + I L    +    + T L  +   ++        A 
Sbjct: 22  WALTNYLEVAEWILPSPQDFWNRLLIELQRPQIWSATAVTLLTAILGSLLGAGVALPLAY 81

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L  + R +   + P L   Q+IP +      V++        V    L   F        
Sbjct: 82  LIYRRRLIAAAVEPFLGATQAIPAIALAPLLVLWLGYGLLPIVALCSLLVFF-------- 133

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S      ++ +++ E +     SGW     + VP ++P ++       +      V
Sbjct: 134 PILVSTTVGFRHLDQEVLEAAVLDGASGWTLLRNMEVPLALPSILGGFRNGFTLSVTGAV 193

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             E+++ G+      G+G+ +       D + +   +  +  +   +  ++
Sbjct: 194 VGELVMGGN------GLGAILTAQRNAVDTIGMFVTIALLCTLAMSFYSVI 238


>gi|146338492|ref|YP_001203540.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146191298|emb|CAL75303.1| putative ABC transporter; permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 288

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 88/239 (36%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A   +     + L          D +      +    +P     +   +L    + + 
Sbjct: 45  LVALAALWQAYGVWLGNPLLFPTFTDTLSAFFENIANGVIPARTLVSLETLLIGYGVGIA 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V  T+A  SR    +L  +  +   +P +  L   +++F             + IF 
Sbjct: 105 LAAVLTTIAIGSRIGADLLEALTSMFNPLPAIALLPLALIWFGLGKG--------SIIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +     +   L  V  ++ L G +   ++ +P + P ++  + +  +
Sbjct: 157 LVHSVLWAIALNTHSGFRAVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +       G +I     + +   +   + T++ +  + + ++F
Sbjct: 217 FAWRTLIAAELVFGVSSGSGGL--GWFIFENRNQLETANVFAGLFTVIIIGLVIENVVF 273



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 79/247 (31%), Gaps = 14/247 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I    +         W     +   FT     +   +    +    ++ +   +I   VG
Sbjct: 43  IILVALAALWQAYGVWLGNPLLFPTFTDTLSAFFENIANGVIPARTLVSLETLLIGYGVG 102

Query: 406 IWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           I +              +  ++    +    PA    PL +        +    +  +++
Sbjct: 103 IALAAVLTTIAIGSRIGADLLEALTSMFNPLPAIALLPLALIWFGLGKGS----IIFVLV 158

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               W I  N  +G  A  N  + V  ++ + G +  R+I++P  FP  +TG       A
Sbjct: 159 HSVLWAIALNTHSGFRAVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWAFA 218

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           W   I +E+             G +I E+  +     V  G+  +    L +   ++  +
Sbjct: 219 WRTLIAAELVFGVSSGSGGL--GWFIFENRNQLETANVFAGLFTVIIIGLVIENVVFATI 276

Query: 578 YLYGTRC 584
                R 
Sbjct: 277 ERKTVRR 283


>gi|332715638|ref|YP_004443104.1| ABC transporter membrane spanning protein [Agrobacterium sp. H13-3]
 gi|325062323|gb|ADY66013.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 267

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 10/189 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + ++  V      T+  +V+  ++A ++   + + + +     +   P   +L   P   
Sbjct: 51  FNNISIVFTASLYTLQPMVLGFLVAVVMGTLLALLVVYSRPFEAIFYPLLVILQIIPKIA 110

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +  V +   +      LL+   + + I+ N I    +   +  ++A S+     +
Sbjct: 111 IAPLFIIWVGFGLPSK----ILLVFLLSFFPIVVNSIVAFKSIEPEVYDLAKSYRAGRLK 166

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LPG  P    G   A   +  A++V+E  +  +      GLG  +       + 
Sbjct: 167 IFWKVELPGALPSLFAGFKVAAALSATAAVVAEFVASDN------GLGYLLLNYNGNMNT 220

Query: 553 PEVVLGVLI 561
                 +++
Sbjct: 221 SMTFAVIIV 229



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 83/213 (38%), Gaps = 17/213 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T   M+   +++++   + A L   SR    +  P+L I+Q IP +      +++  
Sbjct: 61  SLYTLQPMVLGFLVAVVMGTLLALLVVYSRPFEAIFYPLLVILQIIPKIAIAPLFIIWVG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P K        I  +F    + +  +   +  +I  ++ ++++S+R    + FW + 
Sbjct: 121 FGLPSK--------ILLVFLLSFFPIVVNSIVAFKSIEPEVYDLAKSYRAGRLKIFWKVE 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L     ++ +      V +E +   +      G+G  +       +       
Sbjct: 173 LPGALPSLFAGFKVAAALSATAAVVAEFVASDN------GLGYLLLNYNGNMNTSMTFAV 226

Query: 245 MLTMLGVIFL---YDQLLFRPMIVWSNKFRLER 274
           ++ +  +  L     +L+ R  I W    R + 
Sbjct: 227 IIVLSLLGLLLYGIVELIERFAIPWHVSQRRDD 259


>gi|315646570|ref|ZP_07899688.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315278213|gb|EFU41533.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 277

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I   +   +    L  +   T    +   ++  L   + A L   S  L  VL P +
Sbjct: 66  PSKIFSNIWGNMVSGELWGHLGITVGETVVGFLLGTLVGTLLAVLIWWSPFLNKVLDPYM 125

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  S+P +      +V F   +         A +    +  V   T  +Y S   +  +
Sbjct: 126 VVFNSMPKVALGPIFIVMFGAGFT--------AIVITTLSITVIVTTLVVYNSFNEVDSN 177

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +V R+F  +  Q F  + +P S P +V  + +++   W  V+  E +V         G
Sbjct: 178 LIKVVRTFGGTKRQVFQRVILPASYPAIVSTLKVNVGMAWVGVIVGEFLVAKS------G 231

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  I    +  +   +L ++L +  V     Q++
Sbjct: 232 LGYLIMYGFQVFNFTLVLSSLLIIAVVATAMYQIV 266



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+   VV  ++ +++   + + I + P ++  + P+  +  + P     P+ +     
Sbjct: 87  GITVGETVVGFLLGTLVGTLLAVLIWWSPFLNKVLDPYMVVFNSMPKVALGPIFIVMFGA 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +    + +  T       V    +   ++  +V  +F  T  + ++ +ILP  +
Sbjct: 147 GFTAIVITTLSITVIVT----TLVVYNSFNEVDSNLIKVVRTFGGTKRQVFQRVILPASY 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V+      G AW   IV E        +  +GLG  I    +  +F  V+  +LI+ 
Sbjct: 203 PAIVSTLKVNVGMAWVGVIVGEFL------VAKSGLGYLIMYGFQVFNFTLVLSSLLIIA 256

Query: 564 CFVLALNRFL 573
               A+ + +
Sbjct: 257 VVATAMYQIV 266


>gi|253681505|ref|ZP_04862302.1| ABC transporter, permease protein [Clostridium botulinum D str.
           1873]
 gi|253561217|gb|EES90669.1| ABC transporter, permease protein [Clostridium botulinum D str.
           1873]
          Length = 269

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT    ++  ++++I+   + I + +       + P+  +L A P     P+
Sbjct: 68  GTLFKHISITCLETILGFLLSTILGTIIAILLWWSDFACKVLDPYLVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    + N++ G      D  ++  +F  T ++  RY
Sbjct: 128 IIFWVG----NGTSAIVLITVLISIVVTILNILNGFKEIDEDKIKLLKTFEATKFQILRY 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G +W   I+ E        +  +GLG  I    +      V+
Sbjct: 184 LVIPATIPTIIASLKINVGLSWVGVIMGEFL------VAKSGLGFLIIFGGQISQLDMVM 237

Query: 557 LGVLIMCCFVLALNRFL 573
           + +LI+      + + +
Sbjct: 238 MSILILSLLAFLMYKLV 254



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++ S T L  +   ++S +   + A L   S     VL 
Sbjct: 51  TSTPSRMWKSLIKIYSEGTLFKHISITCLETILGFLLSTILGTIIAILLWWSDFACKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N     V+   L +I             ++      I
Sbjct: 111 PYLVVLNALPKVALAPIIIFWVGNGTSAIVLITVLISIVV--------TILNILNGFKEI 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  + +Q   YL +P ++P ++ ++ +++   W  V+  E +V       
Sbjct: 163 DEDKIKLLKTFEATKFQILRYLVIPATIPTIIASLKINVGLSWVGVIMGEFLVAKS---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  + FL  +L+
Sbjct: 219 --GLGFLIIFGGQISQLDMVMMSILILSLLAFLMYKLV 254


>gi|242238740|ref|YP_002986921.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242130797|gb|ACS85099.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 288

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 16/227 (7%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +LL G  +T             +    LPQ  + +   +L   VI  L   + +TLA   
Sbjct: 63  MLLPGFWQTLQAFR------QDIFSGELPQKIAISLGTLLKGYVIGSLLALLLSTLAVSV 116

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    +L  +  ++  +P +  L   +++F           E + IF +  S +W M  +
Sbjct: 117 RFGRDLLALLTSMLNPLPAIALLPLALLWFGLG--------EKSLIFVLVHSVMWPMALN 168

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y     +P  L    R++ L+GW+    + +P ++P ++  + +  +  W  ++A+E++
Sbjct: 169 AYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAIISGLKIGWAFAWRTLIAAELV 228

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
               +     G+G YI     E     +   + +++ +  L + L F
Sbjct: 229 FGASS--GKGGLGWYIFQNRNELYTDRVFAGLASVILIGLLVEGLFF 273



 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G    P   +    ++ +TGWR+   I++P   P  ++G  
Sbjct: 153 LIFVLVHSVMWPMALNAYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAIISGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDRVFAGLASVILIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
             +  L     R 
Sbjct: 271 LFFSTLERLTVRK 283


>gi|322832602|ref|YP_004212629.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321167803|gb|ADW73502.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 271

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 73/204 (35%), Gaps = 6/204 (2%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            ++    + +   +      T+   ++  +++ +I   V   +     + + + P+   L
Sbjct: 50  VVMLESLWTNFGTLTMSLLFTLKITLISFLLSIVIGSVVAFVLVQNRFVETALFPYIVFL 109

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++  V    L+  +  +L+      + I+ N   G  +           
Sbjct: 110 QVTPIVAIAPLIIIWVKDTTLSLVVCSTLM----AVFPIISNTTQGLRSVSPGLLSYFQL 165

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  +    + +P   PY+      + G +   ++V+E  +        TGL   I +
Sbjct: 166 SRASRLQILIRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGNNTGLAYQILQ 223

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           +  +   P +   +L++    +AL
Sbjct: 224 AGYQLDIPLMFAALLLISLTGIAL 247



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 14/232 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +  VP  +V +  +  +  +L      T    L + ++S++   V A +  ++R +   L
Sbjct: 43  QFLVPSPVVMLESLWTNFGTLTMSLLFTLKITLISFLLSIVIGSVVAFVLVQNRFVETAL 102

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +  +Q  PI+      +++  +     V+ + L A+F I +        +  Q L +
Sbjct: 103 FPYIVFLQVTPIVAIAPLIIIWVKDTTLSLVVCSTLMAVFPIIS--------NTTQGLRS 154

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L    +  R S  Q    L +P ++P     + +S        V +E +       
Sbjct: 155 VSPGLLSYFQLSRASRLQILIRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAGTGGNN 214

Query: 221 PLPGIGSYIALAIKEQDLLAILYAM----LTMLGVIFLYDQLLFRPMIVWSN 268
              G+   I  A  + D+  +  A+    LT + +  +   +  R +  W  
Sbjct: 215 T--GLAYQILQAGYQLDIPLMFAALLLISLTGIALFGVMSWISRRALSAWHE 264


>gi|253578431|ref|ZP_04855703.1| binding-protein-dependent transport system inner membrane component
           [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850749|gb|EES78707.1| binding-protein-dependent transport system inner membrane component
           [Ruminococcus sp. 5_1_39BFAA]
          Length = 240

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 11/231 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-CITMFRVVVLIIIASII 400
           +     W      +   I   S   +V            W     +  R+V   ++A  +
Sbjct: 4   FFWITIWQFASMYLGQEILLASPVSVVRKLFELSFTGNFWQSVGFSFVRIVTGFLLAMFL 63

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I + +   +   +   I P   ++ + P   F  L +  +     N ++++S LM+   
Sbjct: 64  GIFLAVLAYWSKTVEILIVPVIAVVKSTPVASFIILCLIWIP--SRNLSVFISFLMVLPV 121

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I  N++ G     +   E+A  F +   R  RYI +  + PY+++    + G  W A
Sbjct: 122 ---IYTNILEGIRQTDSKILEMAKVFQVNPGRKIRYIYVSQVLPYFLSACRLSLGMCWKA 178

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            + +EV       + +  +G  +  +    + P++    +++        +
Sbjct: 179 GVAAEVIG-----VPSGSIGEKLYNAKIYLNTPDLFAWTIVIIVISFVFEK 224



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +    ++ L        P  +V  +       +  Q    + +R+++  ++++     
Sbjct: 7   ITIWQFASMYLGQEILLASPVSVVRKLFELSFTGNFWQSVGFSFVRIVTGFLLAMFLGIF 66

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A LA  S+ + +++VP++ +++S P+  F+   +++         I +   ++F  F  
Sbjct: 67  LAVLAYWSKTVEILIVPVIAVVKSTPVASFIILCLIW---------IPSRNLSVFISFLM 117

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  ++ + +      + E+++ F+++  +K  Y+ V   +P  +    +S+   W 
Sbjct: 118 VLPVIYTNILEGIRQTDSKILEMAKVFQVNPGRKIRYIYVSQVLPYFLSACRLSLGMCWK 177

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             VA+E+I V         IG  +  A    +   +    + ++ + F++
Sbjct: 178 AGVAAEVIGVPSGS-----IGEKLYNAKIYLNTPDLFAWTIVIIVISFVF 222


>gi|313897747|ref|ZP_07831288.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312957282|gb|EFR38909.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 255

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  V+    ++ +  I VG  IG  PHI     P        P     P+ +     
Sbjct: 61  LYTLSEVLFGFALSVLFGIIVGYCIGKHPHIKQLSMPLLVFFQVSPKIALIPIFIIWFGL 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +       ++   + + I+  V+ G    P +        +    + +  +  P   
Sbjct: 121 GYGSK----LFIVFIMSFFPIIEGVLLGLGHIPKEMYAYMQVLNADRRQIFTQLEFPCCI 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY ++    +   A   + V+E  +         G+G   + ++     P ++ G+L   
Sbjct: 177 PYLLSSFKISILQAIIGATVAEWMAG------QLGIGYLQSFASSTFDSPLLISGILFTI 230

Query: 564 CFVLALNR---FLWHPLYLYGT 582
              + L      L   L  Y  
Sbjct: 231 LLGILLYAAVNLLEQRLQRYQE 252



 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 15/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   L      +    T   +L    +S+LF  +      K   +  + +
Sbjct: 37  LPTPTAVAKEMVFQLTQMDFYKNLLYTLSEVLFGFALSVLFGIIVGYCIGKHPHIKQLSM 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L   Q  P +  +   +++F   Y  K+        F +F    + +   +   L +I
Sbjct: 97  PLLVFFQVSPKIALIPIFIIWFGLGYGSKL--------FIVFIMSFFPIIEGVLLGLGHI 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+++    +       Q F  L  P  +P L+ +  +S+         +E +        
Sbjct: 149 PKEMYAYMQVLNADRRQIFTQLEFPCCIPYLLSSFKISILQAIIGATVAEWMAG------ 202

Query: 222 LPGIGSYIALAIKEQDLLAILYAML-TMLGVIFLY 255
             GIG   + A    D   ++  +L T+L  I LY
Sbjct: 203 QLGIGYLQSFASSTFDSPLLISGILFTILLGILLY 237


>gi|328476073|gb|EGF46783.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus MTCC 5462]
          Length = 221

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 19/202 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L  +  ++I+ +         A+ R L   ++ I +++Q+IP L  L+  ++    
Sbjct: 26  ARHFLISIYGVLIAAVIGIPVGLAIARHRTLSNTVIGIANVIQTIPSLAMLSIIMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+ ++L + ++   ++ WQ  + + +
Sbjct: 86  GV--------NTVIVTVFLYSLLPIIKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P SM  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 138 PLSMSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIVRGTNATNGGAIILAG 190

Query: 246 ----LTMLGVIFLYDQLLFRPM 263
                 M  +  L    L R +
Sbjct: 191 ALPTALMAIISDLALGFLERRL 212



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 19/222 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ   Y + +     +        I+++     ++IA++I IPVG+ I     +S+ + 
Sbjct: 6   TWQQFWYYLANNGSYVLSQFARHFLISIY----GVLIAAVIGIPVGLAIARHRTLSNTVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +   +   I+ N   G      + 
Sbjct: 62  GIANVIQTIPSLAMLSIIMLGLGLGVNT----VIVTVFLYSLLPIIKNTYTGMQNVDKNL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A    +T W+    + +P      + G   A   A   + +      G       GL
Sbjct: 118 MDAAKGMGMTRWQSLYMVEIPLSMSVIMAGIRNALVVAIGITAIGAFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
           G  I   T   +   ++L       +M         FL   L
Sbjct: 171 GDIIVRGTNATNGGAIILAGALPTALMAIISDLALGFLERRL 212


>gi|317053497|ref|YP_004118631.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952602|gb|ADU72075.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 249

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             TM  V    I A +I IPVGI I    +    + PF       P ++F P+ +     
Sbjct: 58  ASTMIVVFSSFITAVVIGIPVGIMIVSNCYWKKVLMPFVMFPLGIPKSIFLPVFLLVFGI 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                        +F   + ++ N     S+        A ++  +  +  RYI LP + 
Sbjct: 118 GFGQ----RFAFGVFSAIFLVIMNCGTAISSVQPSHLFTARAYGASMGQISRYIYLPAML 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G            I++E+      +   TG+G  +    E      ++ G+L++ 
Sbjct: 174 PTILEGLRLTMIFTQTGVILAEM------YASRTGVGTLLNNWGEAYQISNLLAGILLIS 227

Query: 564 CFVLALNR-FLW 574
            F + +N  F+W
Sbjct: 228 LFSICINEAFIW 239



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 84/228 (36%), Gaps = 15/228 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL-RMLSAMVISL 80
           L+   L+  +++       +   P   V +    L      Q    +T+  + S+ + ++
Sbjct: 13  LVVLALIWELVSQSGWVSSQLLPPLSEVTLTAYQLIQTEEVQINLASTMIVVFSSFITAV 72

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       +   +     VL+P +     IP   FL   ++ F   +  +      +AIF
Sbjct: 73  VIGIPVGIMIVSNCYWKKVLMPFVMFPLGIPKSIFLPVFLLVFGIGFGQRFAFGVFSAIF 132

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +          +   ++ ++       +R++  S  Q   Y+ +P  +P ++  + ++M
Sbjct: 133 LVI--------MNCGTAISSVQPSHLFTARAYGASMGQISRYIYLPAMLPTILEGLRLTM 184

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                 V+ +EM           G+G+ +    +   +  +L  +L +
Sbjct: 185 IFTQTGVILAEMYA------SRTGVGTLLNNWGEAYQISNLLAGILLI 226


>gi|298294093|ref|YP_003696032.1| ABC transporter inner membrane protein [Starkeya novella DSM 506]
 gi|296930604|gb|ADH91413.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 276

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 11/260 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS-IGYIV 368
           +N   +  R      F    +  +    +  S  L    + +   + I  A+ + +  + 
Sbjct: 7   ANGSSRAVRPAEASSFWRKLSGHRTALWRIASIGLFFLAWEIAGRIPISFAFPTFLETLR 66

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              T       +     T+  +V+ I I+++I + +GI +G        I P   +L A 
Sbjct: 67  AFVTMTLDGSFVAAYAETLQPLVIGIAISAVIGVGLGIVMGLSRFAEWLIAPVFIVLQAA 126

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL+        ++  L + +L        I  N              +  SF  
Sbjct: 127 PMAALIPLITFMYGIGLVSKTLAVIML----ALPVIALNGYKAVRNANPSLVAMCYSFQG 182

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+    II+P   P    G        +   I++E+       +  TG+G  I     
Sbjct: 183 TWWQRIVKIIIPDASPVIFAGLRLGLAAGFIGVILAELL------ITPTGIGDLITYHRS 236

Query: 549 KGSFPEVVLGVLIMCCFVLA 568
             ++ E+   V+ +      
Sbjct: 237 VANYAEMYAAVVSIILVSTL 256



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 77/189 (40%), Gaps = 14/189 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T   ++  + IS +       +   SR    ++ P+  ++Q+ P+   +      +  
Sbjct: 82  AETLQPLVIGIAISAVIGVGLGIVMGLSRFAEWLIAPVFIVLQAAPMAALIPLITFMYGI 141

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K +        A+    +  +  + Y+++ N    L  +  SF+ + WQ+   + +
Sbjct: 142 GLVSKTL--------AVIMLALPVIALNGYKAVRNANPSLVAMCYSFQGTWWQRIVKIII 193

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + + ++ G+  V+ +E++      I   GIG  I       +   +  A+
Sbjct: 194 PDASPVIFAGLRLGLAAGFIGVILAELL------ITPTGIGDLITYHRSVANYAEMYAAV 247

Query: 246 LTMLGVIFL 254
           ++++ V  L
Sbjct: 248 VSIILVSTL 256


>gi|119387469|ref|YP_918503.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378044|gb|ABL72807.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 279

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   + +T   ++ A+ I++   F    LAA+  R+   L PILD+MQ++P   +L   
Sbjct: 81  GLWTGSMQTIALVVVAVAIAVAIAFPLGILAARRPRVEAALRPILDVMQTVPPWVYLIPA 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F           ++ AI A     V  M      +   +P+DL+E+  +        
Sbjct: 141 VMIFSLG--------KVPAIIATIVYGVPPMLRLTTLAFRGVPKDLKELGEAIGAKPGTI 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W +  P + P L+  +          ++ S  +VV   ++   G+G+ +   +   ++ 
Sbjct: 193 LWKIEFPAATPTLLVGLNQ-------CILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEMG 245

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ V  L D+L
Sbjct: 246 LGLRAGLAIVAVALLMDRL 264



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 4/108 (3%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI    RP + + ++P   ++   P  V+    V   S       +   +  I     
Sbjct: 106 PLGILAARRPRVEAALRPILDVMQTVPPWVYLIPAVMIFSLG----KVPAIIATIVYGVP 161

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +L          P D KE+  +           I  P   P  + G 
Sbjct: 162 PMLRLTTLAFRGVPKDLKELGEAIGAKPGTILWKIEFPAATPTLLVGL 209


>gi|302390752|ref|YP_003826573.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302201380|gb|ADL08950.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 254

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 6/231 (2%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W  V                V    + +   ++     ++  +   +  A ++ + 
Sbjct: 14  LAVLWEAVRIAGGYSELLLPSLSSVISSFWAERAELLKNVLFSLRIIGTGLSTAVVLAMV 73

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + +           I     ++   P     P+ +             +  +++F   W 
Sbjct: 74  LTLLCMNGRLFPGVITDIMAIMHPLPGIAILPVAILWFGIG----VKAVLFVIVFSAVWP 129

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  +   G  + P +  E+  +  ++G +    ++LP  FP+ + G  +    AW AS+ 
Sbjct: 130 LTNHFYTGFRSIPKNQLEIGRNLGLSGIKLVLSVMLPASFPHILGGLRSGWARAWQASVA 189

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           +E+             G Y+ +       P V  G+L++    L +   ++
Sbjct: 190 AELVFGAAGGHGGL--GWYLYKKRFMMETPGVFAGMLVIIVIGLIVEYLIF 238



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 10/204 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L +    +   + + +  +++   V   L    R    V+  I+ IM  +P +  L
Sbjct: 45  ERAELLKNVLFSLRIIGTGLSTAVVLAMVLTLLCMNGRLFPGVITDIMAIMHPLPGIAIL 104

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F             A +F I  S VW +T   Y    +IP++  E+ R+  LSG
Sbjct: 105 PVAILWFGIGV--------KAVLFVIVFSAVWPLTNHFYTGFRSIPKNQLEIGRNLGLSG 156

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +    + +P S P ++  +    +  W   VA+E++            G Y+       
Sbjct: 157 IKLVLSVMLPASFPHILGGLRSGWARAWQASVAAELVFGAAGGHGGL--GWYLYKKRFMM 214

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
           +   +   ML ++ +  + + L+F
Sbjct: 215 ETPGVFAGMLVIIVIGLIVEYLIF 238


>gi|70733647|ref|YP_257287.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347946|gb|AAY95552.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5]
          Length = 288

 Score = 85.0 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 85/215 (39%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    L      + + +L   +I ++  F   TLA  +R    +L  +  
Sbjct: 69  LQTASALYQGLLSGELLGKVGISLVVLLKGYLIGIVLAFALTTLAVSTRLGRDLLSTLTS 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  + Y     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNTYAGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +   ++ +P ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLKGLRLVLFILIPAALPSILAGLKIGWAFAWRTLIAAELVFGATS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVILIGLLVENLIF 273



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 6/208 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    I++  ++   +I  ++   +             +     +    PA    PL
Sbjct: 82  GELLGKVGISLVVLLKGYLIGIVLAFALTTLAVSTRLGRDLLSTLTSMFNPLPAIALLPL 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  AG        +    ++ + G R   +
Sbjct: 142 ALLWFGLGQNS----LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLF 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  + G       AW   I +E+           GLG YI ++  +    +V 
Sbjct: 198 ILIPAALPSILAGLKIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTDKVF 255

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+ ++    L +   ++  L     + 
Sbjct: 256 AGLAVVILIGLLVENLIFDTLERITVKR 283


>gi|289645172|ref|ZP_06477188.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
 gi|289505016|gb|EFD26098.1| binding-protein-dependent transport systems inner membrane
           component [Frankia symbiont of Datisca glomerata]
          Length = 298

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 8/198 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            +     ++     T    +V + IA+ + +   + +     +     P+A +L   P  
Sbjct: 87  DWPTFHEILTGLGETAQVALVGLAIAAALGMLFAVLMSQARWVERSFYPWAVVLQTIPIL 146

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL+   + Y         +++ +    + I+ N + G S+      ++ +    + W
Sbjct: 147 AIVPLIGFWLGYGF----WSRTVVCVLIALFPIITNTLFGLSSVDATHHDLFTLRRASRW 202

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               ++ +P   P   TG   + G +   +IV +            G+G+ I + T    
Sbjct: 203 ARLVHLEIPSALPAVFTGLRISAGLSVIGAIVGDFF----FREGRPGIGSLIDDYTRGLE 258

Query: 552 FPEVVLGVLIMCCFVLAL 569
              +   +++   F LA+
Sbjct: 259 SAPLFAAIIVSSLFGLAV 276



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 12/191 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T    L  + I+     ++A L +++R +     P   ++Q+IPIL  +     +  
Sbjct: 98  LGETAQVALVGLAIAAALGMLFAVLMSQARWVERSFYPWAVVLQTIPILAIVPLIGFWLG 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  + +   L A+F I T+ ++         L ++     ++    R S W +  +L 
Sbjct: 158 YGFWSRTVVCVLIALFPIITNTLF--------GLSSVDATHHDLFTLRRASRWARLVHLE 209

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + +S        +  +           PGIGS I    +  +   +  A
Sbjct: 210 IPSALPAVFTGLRISAGLSVIGAIVGDFF----FREGRPGIGSLIDDYTRGLESAPLFAA 265

Query: 245 MLTMLGVIFLY 255
           ++         
Sbjct: 266 IIVSSLFGLAV 276


>gi|303256855|ref|ZP_07342869.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|330998897|ref|ZP_08322624.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
 gi|302860346|gb|EFL83423.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329576111|gb|EGG57630.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 278

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L +     +T+   V+  I  +   + VG+W+   P  ++   P+ + L + P  +  P+
Sbjct: 72  LEIYPNLAVTLTETVLAFIFGTAAGLLVGLWLALAPTAAAIADPYIKGLNSMPRVILAPI 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                     +       L+ F     + FNV  G      +    A        +  R+
Sbjct: 132 FGVWFGLGIGSKVALGITLVFFI----VFFNVYQGVREVSPNVLASARMLGANKTQLLRF 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP    +  +   ++ G A+  ++V E           +G+G  I ++        V+
Sbjct: 188 VYLPSAMSWVFSSLHSSVGMAFVGAVVGEYLG------SASGVGYLILQAESTFDINTVM 241

Query: 557 LGVLIMCCFVLALN 570
            G+L++  F L L+
Sbjct: 242 AGILVLTAFALVLD 255



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    + A +       +     A +     +  P +  + S+P +       V+F    
Sbjct: 81  TLTETVLAFIFGTAAGLLVGLWLALAPTAAAIADPYIKGLNSMPRVILAPIFGVWFGLGI 140

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV        F +F        F++YQ +  +  ++   +R    +  Q   ++ +P 
Sbjct: 141 GSKVALGITLVFFIVF--------FNVYQGVREVSPNVLASARMLGANKTQLLRFVYLPS 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +M  +  ++  S+   +   V  E +          G+G  I  A    D+  ++  +L 
Sbjct: 193 AMSWVFSSLHSSVGMAFVGAVVGEYLGSAS------GVGYLILQAESTFDINTVMAGILV 246

Query: 248 MLGVIFLYDQLL 259
           +     + D ++
Sbjct: 247 LTAFALVLDWMV 258


>gi|229490049|ref|ZP_04383902.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
 gi|229323150|gb|EEN88918.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
          Length = 267

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +A  T    L    +SL+  ++ A +   S  L   LVP+  + Q++PI+      +++
Sbjct: 67  GHAWSTLQVTLVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIW 126

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F            L  +  I  +  + MT  + +      R+   + RS   + WQ+F Y
Sbjct: 127 FGFGL--------LPKVLVIALATFFPMTIGLIEGFAAADREAGALLRSMGSTRWQEFRY 178

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P     + + ++      V SE +          G+G Y++          +L
Sbjct: 179 VRLPSAIPRFFTALRIGITYAVVGAVFSEYVG------ATSGLGIYMSTQKNSFRTDLVL 232

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWS 267
            A+L    +      L F   R +  W+
Sbjct: 233 AAVLVTALISVTLYLLTFAIERIVAPWA 260



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 10/198 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            + +   +      T+   +V   ++ ++   + + + F P +S  + P   +    P  
Sbjct: 58  GWDNREIISGHAWSTLQVTLVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPII 117

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL++    +  L       L++   T + +   +I G +A   +   +  S   T W
Sbjct: 118 AIAPLMIIWFGFGLLPK----VLVIALATFFPMTIGLIEGFAAADREAGALLRSMGSTRW 173

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +RY+ LP   P + T        A   ++ SE          T+GLG Y++       
Sbjct: 174 QEFRYVRLPSAIPRFFTALRIGITYAVVGAVFSEYVG------ATSGLGIYMSTQKNSFR 227

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+  VL+     + L
Sbjct: 228 TDLVLAAVLVTALISVTL 245


>gi|86606006|ref|YP_474769.1| ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab]
 gi|86554548|gb|ABC99506.1| ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab]
          Length = 265

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 89/238 (37%), Gaps = 5/238 (2%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L + +   V  +  + W   V    +         +V     ++   +     IT+   V
Sbjct: 9   LDVIAPGIVGILFLVGWEVAVRLTGVPPYLLPGPILVAQTLVREWGSLFPSLLITLQITV 68

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V  ++A++  + + I       I   + P+A +L   P     PL++  +        + 
Sbjct: 69  VAFLLATVSGLLLAILFAQSKWIERSLFPYAVILQTTPIVSIAPLIIIWLRNNTFAAMVV 128

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            + ++     + I+ N   G ++  ++   +   +    W+   Y+ LP   PY++ G  
Sbjct: 129 CAWIV---AFFPIISNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSALPYFLGGLR 185

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            + G +   ++V+E  +      +  G+   I  S+     P +   ++++    + +
Sbjct: 186 ISGGLSLIGAVVAEFVAG--TGGQRAGIAYQILISSFNLQVPRMFAALVLVTGLGILI 241



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 91/232 (39%), Gaps = 9/232 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              LV   + + L G+    +P  I+    +  +  SL      T    + A +++ +  
Sbjct: 19  ILFLVGWEVAVRLTGVPPYLLPGPILVAQTLVREWGSLFPSLLITLQITVVAFLLATVSG 78

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A L A+S+ +   L P   I+Q+ PI+      +++  N           A +   +
Sbjct: 79  LLLAILFAQSKWIERSLFPYAVILQTTPIVSIAPLIIIWLRNN-------TFAAMVVCAW 131

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + +  +    L ++  +L  + + ++ + WQ   YL +P ++P  +  + +S    
Sbjct: 132 IVAFFPIISNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSALPYFLGGLRISGGLS 191

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               V +E   V  T     GI   I ++     +  +  A++ + G+  L 
Sbjct: 192 LIGAVVAEF--VAGTGGQRAGIAYQILISSFNLQVPRMFAALVLVTGLGILI 241


>gi|32034639|ref|ZP_00134786.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208013|ref|YP_001053238.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae L20]
 gi|126096805|gb|ABN73633.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 249

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +    +    +P  +     I      L Q+   T + +++ + +  L   + A   + 
Sbjct: 22  VVTGFALPHYMLPAPLTVFEQIDNQFPLLWQHGQVTFIEIIAGLSLGFLLGVMSALALSL 81

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S+ L   L+P+L I Q+IP+       V++       K+    L   F +  +       
Sbjct: 82  SKWLNGFLLPLLVISQAIPVFAIAPLLVLWLGYGMASKIAMTVLIIYFPVTAAC------ 135

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             Y  L N P+   E++++  +        + +P ++P L   + +++S      V    
Sbjct: 136 --YDGLRNTPKAYLELAKTLEIKPLAILLRVRLPAALPALASGLRIAVS------VVPIG 187

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            VVG+ V    G+G  +  A        +  A+  +L +      +  R +  W
Sbjct: 188 AVVGEWVGSSQGLGYLMLHANARMQTDLLFAALTVLLLMTLCLYFITDRLLRRW 241



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 14/199 (7%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           G +T   ++  + +  ++ +   + +     ++  + P   +  A P     PL+V  + 
Sbjct: 54  GQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPVFAIAPLLVLWLG 113

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y   +      L++ F     +      G    P  + E+A +  I        + LP  
Sbjct: 114 YGMASKIAMTVLIIYF----PVTAACYDGLRNTPKAYLELAKTLEIKPLAILLRVRLPAA 169

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   +G   A       ++V E          + GLG  +  +  +     +   + ++
Sbjct: 170 LPALASGLRIAVSVVPIGAVVGEWVG------SSQGLGYLMLHANARMQTDLLFAALTVL 223

Query: 563 CCFVLAL----NRFLWHPL 577
               L L    +R L   L
Sbjct: 224 LLMTLCLYFITDRLLRRWL 242


>gi|254720007|ref|ZP_05181818.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. 83/13]
 gi|265985017|ref|ZP_06097752.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306837859|ref|ZP_07470720.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
 gi|306840875|ref|ZP_07473619.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|264663609|gb|EEZ33870.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306289078|gb|EFM60336.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306407029|gb|EFM63247.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
          Length = 263

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + +     + +   IT+   ++   I ++  + +G W   +P +++   P+ +   +
Sbjct: 48  LRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDPYVKAANS 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 108 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLSNARMLG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP    +  +   TA G A   ++V E          + GLG  I ++ 
Sbjct: 164 MNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLG------SSAGLGYLIHQAE 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G++++  FVL ++           +W P
Sbjct: 218 GVFDVTGVFAGMIVLTAFVLLIDWGVSIIEQRLLVWRP 255



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+           ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 41  ATPGDVALRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 101 YVKAANSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   ++  Q    + +P ++  +  ++  ++       V  E +         
Sbjct: 153 QTVLSNARMLGMNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   M+ +   + L D    ++ + ++VW  K
Sbjct: 208 -GLGYLIHQAEGVFDVTGVFAGMIVLTAFVLLIDWGVSIIEQRLLVWRPK 256


>gi|167841519|ref|ZP_02468203.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia thailandensis MSMB43]
          Length = 256

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 10/200 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T+  + +     ++    VG  IG+   I   + P  ++L   PA    
Sbjct: 51  DWPRLAGSAGNTLKLLGIGNAYGALTGFLVGASIGWSRRIGYWVHPVLRVLGPVPATALL 110

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL        +       + L+   T + +     +G +     + +VA +         
Sbjct: 111 PLTFYFFPSSYS----AAAFLIALATGFPVAVLTWSGVAGVNKAYYDVARTLGANARFLV 166

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G       ++   + +E+          +GLG Y++ +    S+  
Sbjct: 167 LRVAIPAALPQVFVGLFMGLSASFTVLVTAEMMG------VKSGLGWYLSWAQGWASYVN 220

Query: 555 VVLGVLIMCCFVLALNRFLW 574
           +   +++M      L   L+
Sbjct: 221 MYAALIVMALLFSGLITLLF 240



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 89/242 (36%), Gaps = 17/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78
           L+A  L +    IL         P        I +   D   L   A  T   +      
Sbjct: 13  LVALPLGLAAWEILTAKTALLPTPFFAPPQALIEVYVDDWPRLAGSAGNTLKLLGIGNAY 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L  F+       SRR+G  + P+L ++  +P    L  T  +F          +  AA
Sbjct: 73  GALTGFLVGASIGWSRRIGYWVHPVLRVLGPVPATALLPLTFYFF--------PSSYSAA 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +  + +    +  +  + +   +V+R+   +       + +P ++P +   + M
Sbjct: 125 AFLIALATGFPVAVLTWSGVAGVNKAYYDVARTLGANARFLVLRVAIPAALPQVFVGLFM 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  +  +V +EM+ V        G+G Y++ A      + +  A++ M  +      L
Sbjct: 185 GLSASFTVLVTAEMMGVKS------GLGWYLSWAQGWASYVNMYAALIVMALLFSGLITL 238

Query: 259 LF 260
           LF
Sbjct: 239 LF 240


>gi|220922642|ref|YP_002497944.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947249|gb|ACL57641.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 290

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 93/242 (38%), Gaps = 12/242 (4%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            L+   L +    +      +  +P     +  +   +    L      +   +    + 
Sbjct: 44  GLIIAALALAWEGLARWQNNDLLLPGCLATLSALTEGVASGELLDRVRISLTVLAQGYLC 103

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   F+  TLA  ++    +L  +  +   +P +  L   +++F             + 
Sbjct: 104 GIGLAFLLTTLAVSTQAGRDLLSTLTAMFNPLPAIALLPLALLWFGLGSG--------SL 155

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +  S VW +  + +    ++P  L    R++ L+G    W + +P ++P ++  + +
Sbjct: 156 IFVLIHSVVWPLALNTFAGFQSVPETLRMAGRNYGLTGLAYVWQILIPAALPAILSGLKI 215

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  W  ++A+E++    +     G+G Y+     E     +   +L ++ +  + + +
Sbjct: 216 GWAFAWRTLIAAELVFGAAS--GRGGLGWYVFQNRNELYTDRVFAGLLLVIAIGLVVENI 273

Query: 259 LF 260
           +F
Sbjct: 274 VF 275



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  ++I    W +  N  AG  + P   +    ++ +TG  +   I++P   P  ++G  
Sbjct: 155 LIFVLIHSVVWPLALNTFAGFQSVPETLRMAGRNYGLTGLAYVWQILIPAALPAILSGLK 214

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG Y+ ++  +     V  G+L++    L +  
Sbjct: 215 IGWAFAWRTLIAAELVFGAAS--GRGGLGWYVFQNRNELYTDRVFAGLLLVIAIGLVVEN 272

Query: 572 FLWHPLYLYGTRC 584
            ++       TR 
Sbjct: 273 IVFATFERLTTRR 285


>gi|90422375|ref|YP_530745.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90104389|gb|ABD86426.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 291

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 14/207 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++        + D  +V     IT+ R+ V + +A  + + +G+ +G    I   ++   
Sbjct: 78  TVWAAARELFFADPYHV----GITLIRLTVAVGVAMSLGVLLGLAMGTVRWIRPYLKAII 133

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +    PA  +  + V        NP   +  +++     +   NV  G  A P D  ++
Sbjct: 134 LIDTGIPALSWMLIAVFWFK----NPETRIFFILLVILLPFYALNVYEGVRALPKDLVDM 189

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             SF  + W+  RY+ILP I PY      +  G A    I +E+ +         G+GA 
Sbjct: 190 IESFRPSRWQVLRYLILPHIVPYIFLTTKSVIGYAIRMVIFAELVA------SAVGIGAR 243

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +  +       +V+     +    L L
Sbjct: 244 MNLAQSTFRIDQVLAWTFFLVILNLVL 270



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 18/248 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----PQYASR 67
            +R   N  DL A  +V+ ++ I +           +   V +      L    P +   
Sbjct: 37  PQRNPENRRDLFATAVVVIVMLIAMEITSRYVPDYIMPSPVTVWAAARELFFADPYHVGI 96

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R+  A+ +++    +        R +   L  I+ I   IP L ++   V +F N  
Sbjct: 97  TLIRLTVAVGVAMSLGVLLGLAMGTVRWIRPYLKAIILIDTGIPALSWMLIAVFWFKN-- 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E    F +    +     ++Y+ +  +P+DL ++  SFR S WQ   YL +P 
Sbjct: 155 ------PETRIFFILLVILLPFYALNVYEGVRALPKDLVDMIESFRPSRWQVLRYLILPH 208

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +P +       +      V+ +E++          GIG+ + LA     +  +L     
Sbjct: 209 IVPYIFLTTKSVIGYAIRMVIFAELVA------SAVGIGARMNLAQSTFRIDQVLAWTFF 262

Query: 248 MLGVIFLY 255
           ++ +  + 
Sbjct: 263 LVILNLVL 270


>gi|309389675|gb|ADO77555.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium praevalens DSM 2228]
          Length = 256

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 69/174 (39%), Gaps = 6/174 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               +  I+    L    P     PL++             + L++I    W ++ N+  
Sbjct: 84  STTAAGLIETLTALAHPLPGIALMPLILIWFGSG----KNAILLVIIHSVLWPLILNLST 139

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G ++ P  +  +A ++ +    +   I++P   PY+++G   +   +W A I +E+    
Sbjct: 140 GFNSIPEIYTLIAKNYRLNKIDFMFKILIPASLPYFISGLKISWARSWRALISAEMLFGA 199

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
              L   GLG YI +       P V  G++++    + +  F++  +     + 
Sbjct: 200 VNSLG--GLGWYIFQKRVFFDLPGVFAGIIVIIIIGVLVEDFVFKKIEKVTVKK 251



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 90/207 (43%), Gaps = 10/207 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L   SL +    +   +L  + ++ +   + A ++  S     ++  +  +   +P + 
Sbjct: 46  SLSDGSLLKQIIFSFSIILQGLFLATVAALLLALISYFSTTAAGLIETLTALAHPLPGIA 105

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            +   +++F +         + A +  I  S +W +  ++     +IP     +++++RL
Sbjct: 106 LMPLILIWFGSG--------KNAILLVIIHSVLWPLILNLSTGFNSIPEIYTLIAKNYRL 157

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +     + + +P S+P  +  + +S +  W  ++++EM+        L G+G YI     
Sbjct: 158 NKIDFMFKILIPASLPYFISGLKISWARSWRALISAEMLFGAVN--SLGGLGWYIFQKRV 215

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
             DL  +   ++ ++ +  L +  +F+
Sbjct: 216 FFDLPGVFAGIIVIIIIGVLVEDFVFK 242


>gi|163841344|ref|YP_001625749.1| sulfate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954820|gb|ABY24335.1| sulfate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 177

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 71/176 (40%), Gaps = 10/176 (5%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A+ R L     P++  +Q +P + ++   +++F                F +    + +
Sbjct: 1   MAQVRPLPTAFGPLISGLQVLPSVAWVPAAIIWFGLSDG--------TVYFVLLMGAIPS 52

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +   +   +  +P     +      S  +  + +  P ++PG +  +    +  W  ++A
Sbjct: 53  IINGLISGVDQVPPQFRSMGSVLGASKLEMAFRIIWPAALPGYLSGLKQGWAFSWRLLMA 112

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           +E+I VG       G+GS +       D+  ++ A+L +L V  + +  +F P+  
Sbjct: 113 AEIIAVGGNFG--FGLGSLLQRGRDLSDMGVVMAAILAILVVGIVVELAVFAPIER 166



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 60/172 (34%), Gaps = 6/172 (3%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     + +   P    L   P+  + P  +             +  +++ G    I+  
Sbjct: 1   MAQVRPLPTAFGPLISGLQVLPSVAWVPAAIIWFGLSDGT----VYFVLLMGAIPSIING 56

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +I+G    P  F+ + S    +       II P   P Y++G       +W   + +E+ 
Sbjct: 57  LISGVDQVPPQFRSMGSVLGASKLEMAFRIIWPAALPGYLSGLKQGWAFSWRLLMAAEII 116

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           + G       GLG+ +    +      V+  +L +    + +   ++ P+  
Sbjct: 117 AVGGNF--GFGLGSLLQRGRDLSDMGVVMAAILAILVVGIVVELAVFAPIER 166


>gi|257784196|ref|YP_003179413.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium parvulum DSM 20469]
 gi|257472703|gb|ACV50822.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium parvulum DSM 20469]
          Length = 257

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 101/261 (38%), Gaps = 18/261 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  L +F+ +  ++ ++   I    VP  I  +  +  D   L  +   T L     + I
Sbjct: 11  VISLTSFLALWQLVIVVGI-IPNYLVPTPIQVVFALVKDFQLLMTHTGITLLESFVGLAI 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +L  F+ A      + L  +L P++ I Q+IP++      V++             L  
Sbjct: 70  GVLIGFLLAVFMDFFKTLDKLLSPLITISQTIPVVTIAPLLVLWLGYGL--------LPK 121

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +  S  + +T ++  +   I  D+ ++  +   +  Q FW++ +  + P     + M
Sbjct: 122 IVLVAISTFFPITVALNSAFKAIDPDMVDLMTTMGATRMQVFWHVKLAAAAPQFFSGLKM 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLY 255
           S++      V +E +          G+G Y+     A     + A +  +  +  V+   
Sbjct: 182 SVTYAVIGAVIAEWLGGDA------GLGVYMTRVRKAFAYDRMFAAIVVVSALSLVLMKL 235

Query: 256 DQLLFRPMIVWSNKFRLERTT 276
            +L+ +  + W     ++ + 
Sbjct: 236 VELIQKCALPWDTSQNVKESA 256



 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++    IT+    V + I  +I   + +++ F   +   + P   +    P     
Sbjct: 48  DFQLLMTHTGITLLESFVGLAIGVLIGFLLAVFMDFFKTLDKLLSPLITISQTIPVVTIA 107

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V  + Y  L       +L+   T + I   + +   A   D  ++ ++   T  + +
Sbjct: 108 PLLVLWLGYGLL----PKIVLVAISTFFPITVALNSAFKAIDPDMVDLMTTMGATRMQVF 163

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ L    P + +G   +   A   ++++E            GLG Y+    +  ++  
Sbjct: 164 WHVKLAAAAPQFFSGLKMSVTYAVIGAVIAEWLGGD------AGLGVYMTRVRKAFAYDR 217

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +   ++++    L L + +
Sbjct: 218 MFAAIVVVSALSLVLMKLV 236


>gi|1477571|gb|AAB41655.1| ORF5 [Mycobacterium smegmatis]
          Length = 233

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+++   +A+++ I +G+ +G        ++PF +L+   PA    PL +     
Sbjct: 100 LASLQRILLGFGLAAVVGIALGVLVGRSEVARMTLRPFIELIRPIPAIALVPLTILLFP- 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +  +  F   + ++ + I    + P  ++E A +          ++I+PG  
Sbjct: 159 ---SSEQGIVFITFFAAFFPVVVSTIHAMDSMPKVWEEAAKTMGAGRMSLLIHVIIPGRC 215

Query: 504 PYYVTGAI---TACGGAW 518
           P +         + G AW
Sbjct: 216 PAFSPACRWRWASRGSAW 233



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 3   LYNILPPFISRRIFP---NIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPIT 55
           L + LP  + RR+      +  +  F+    ++     +          P  ++  +   
Sbjct: 30  LVDHLPKSVVRRVPAVVLPLIPIAVFLTAWHLLTANNVVAWLRFNRMPSPDSVLQALLAR 89

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +   S       +  R+L    ++ +       L  +S    M L P +++++ IP +  
Sbjct: 90  ISSGSYYDDLLASLQRILLGFGLAAVVGIALGVLVGRSEVARMTLRPFIELIRPIPAIAL 149

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +  T++ F          +E   +F  F +  + +  S   ++ ++P+  EE +++    
Sbjct: 150 VPLTILLF--------PSSEQGIVFITFFAAFFPVVVSTIHAMDSMPKVWEEAAKTMGAG 201

Query: 176 GWQKFWYLGVPFSMP 190
                 ++ +P   P
Sbjct: 202 RMSLLIHVIIPGRCP 216


>gi|210632334|ref|ZP_03297301.1| hypothetical protein COLSTE_01195 [Collinsella stercoris DSM 13279]
 gi|210159650|gb|EEA90621.1| hypothetical protein COLSTE_01195 [Collinsella stercoris DSM 13279]
          Length = 244

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 73/226 (32%), Gaps = 10/226 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W  V     +          V      D   +      ++    + +     +   
Sbjct: 6   LLLAWQAVCSAGLVPPFMLPSPVSVAQALVTDWPLLASHAATSLAEAGLGLGAGVALGFV 65

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           V + +     +     P   L    P     PL+V    Y      L   +L++  T + 
Sbjct: 66  VALAMDRFELLYRAFYPIVVLTQTIPTVAIAPLLVLWFGYG----MLPKVVLIVVTTFFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   ++ G  +   D  ++  +   + W+  R+  LP   P    G   +   A   +++
Sbjct: 122 ITVGLLEGLRSVDPDEIDLMRAMGASRWQIMRHAKLPAALPQLFGGLKISAAYAIVGAVI 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +E           +GLG Y+    +  SF ++   + ++    L L
Sbjct: 182 AEWLGG------FSGLGVYMTRVRKAYSFDKMFAVIFLISALSLVL 221



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 85/227 (37%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P  +     +  D   L  +A+ +       +   +   FV A    +   L     P
Sbjct: 23  MLPSPVSVAQALVTDWPLLASHAATSLAEAGLGLGAGVALGFVVALAMDRFELLYRAFYP 82

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ + Q+IP +      V++F            L  +  I  +  + +T  + + L ++ 
Sbjct: 83  IVVLTQTIPTVAIAPLLVLWFGYGM--------LPKVVLIVVTTFFPITVGLLEGLRSVD 134

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  ++ R+   S WQ   +  +P ++P L   + +S +      V +E +         
Sbjct: 135 PDEIDLMRAMGASRWQIMRHAKLPAALPQLFGGLKISAAYAIVGAVIAEWLGG------F 188

Query: 223 PGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            G+G Y+     A     + A+++ +  +  V+      L R ++ W
Sbjct: 189 SGLGVYMTRVRKAYSFDKMFAVIFLISALSLVLMWVVDALRRAVMPW 235


>gi|153011191|ref|YP_001372405.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151563079|gb|ABS16576.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 280

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 93/246 (37%), Gaps = 6/246 (2%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R    E  L++        +    W  +V    +         +V     +D   +    
Sbjct: 17  RLARRERTLRIMMPTLAIIIALGIWEGLVRYYQVPHYLIPAPSLVAETLIKDGPSLTASM 76

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+   ++ +  A I  + +G+       I     PFA +L   P     PL++  V  
Sbjct: 77  WFTVKLTLISLACAIIGGVLLGMIFALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRD 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +   ++      + IL N + G  +  ++ +++   +  + W+  RY++ P   
Sbjct: 137 TFSALLICAWIV----AFFPILSNTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSAL 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY++     A G +   ++V+E  +      ++TGL + I ES+ +   P +   + ++ 
Sbjct: 193 PYFMAALKIAGGLSLIGAVVAEFVAG--TAGQSTGLASRILESSFRNEIPRMFAALFLVS 250

Query: 564 CFVLAL 569
              + +
Sbjct: 251 LLGIVI 256



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 102/260 (39%), Gaps = 16/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R + P +  ++A  +  G++    + +    +P   +    +  D  SL      T    
Sbjct: 26  RIMMPTLAIIIALGIWEGLVR--YYQVPHYLIPAPSLVAETLIKDGPSLTASMWFTVKLT 83

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++  +++   +   + A SR + M   P   I+Q  P++      ++Y  + +   +I
Sbjct: 84  LISLACAIIGGVLLGMIFALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLI 143

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A + A F I +        +    L +   +L ++ R +R S WQ+  YL  P ++P  
Sbjct: 144 CAWIVAFFPILS--------NTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYF 195

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TML 249
           +  + ++        V +E   V  T     G+ S I  +    ++  +  A+     + 
Sbjct: 196 MAALKIAGGLSLIGAVVAEF--VAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLG 253

Query: 250 GVIFLYDQLLFR-PMIVWSN 268
            VIFL    L R  +  W  
Sbjct: 254 IVIFLVTSWLSRLVLGRWHE 273


>gi|17989307|ref|NP_541940.1| taurine transport permease protein TAUC [Brucella melitensis bv. 1
           str. 16M]
 gi|62317790|ref|YP_223643.1| ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|83269771|ref|YP_419062.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189023043|ref|YP_001932784.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225628742|ref|ZP_03786776.1| taurine transport permease protein TAUC [Brucella ceti str. Cudo]
 gi|225686131|ref|YP_002734103.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|237817330|ref|ZP_04596322.1| taurine transport permease protein TAUC [Brucella abortus str. 2308
           A]
 gi|254691290|ref|ZP_05154544.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 6 str. 870]
 gi|254695409|ref|ZP_05157237.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 3 str. Tulya]
 gi|254699081|ref|ZP_05160909.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699573|ref|ZP_05161401.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|254706174|ref|ZP_05168002.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254711530|ref|ZP_05173341.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254712126|ref|ZP_05173937.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254715197|ref|ZP_05177008.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|254732524|ref|ZP_05191102.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|256015069|ref|YP_003105078.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|256029836|ref|ZP_05443450.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256043203|ref|ZP_05446142.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256059483|ref|ZP_05449683.1| binding-protein-dependent transport systems inner membrane
           component [Brucella neotomae 5K33]
 gi|256111808|ref|ZP_05452773.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256158006|ref|ZP_05455924.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|256253036|ref|ZP_05458572.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
 gi|256256476|ref|ZP_05462012.1| binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 9 str. C68]
 gi|256262743|ref|ZP_05465275.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260167059|ref|ZP_05753870.1| ABC transporter, permease protein [Brucella sp. F5/99]
 gi|260545025|ref|ZP_05820846.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260564419|ref|ZP_05834904.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260756897|ref|ZP_05869245.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260760329|ref|ZP_05872677.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260763569|ref|ZP_05875901.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882712|ref|ZP_05894326.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261215787|ref|ZP_05930068.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|261216916|ref|ZP_05931197.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261220131|ref|ZP_05934412.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261313614|ref|ZP_05952811.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261319146|ref|ZP_05958343.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261319785|ref|ZP_05958982.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261323453|ref|ZP_05962650.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261750029|ref|ZP_05993738.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261756451|ref|ZP_06000160.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265986852|ref|ZP_06099409.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265989633|ref|ZP_06102190.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993265|ref|ZP_06105822.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|265996520|ref|ZP_06109077.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|294853296|ref|ZP_06793968.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297249834|ref|ZP_06933535.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|306845590|ref|ZP_07478159.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|17985173|gb|AAL54204.1| taurine transport permease protein tauc [Brucella melitensis bv. 1
           str. 16M]
 gi|62197983|gb|AAX76282.1| ABC transporter, permease protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82940045|emb|CAJ13084.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|189021617|gb|ACD74338.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225616588|gb|EEH13636.1| taurine transport permease protein TAUC [Brucella ceti str. Cudo]
 gi|225642236|gb|ACO02149.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|237788143|gb|EEP62359.1| taurine transport permease protein TAUC [Brucella abortus str. 2308
           A]
 gi|255997729|gb|ACU49416.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|260098296|gb|EEW82170.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260152062|gb|EEW87155.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260670647|gb|EEX57587.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260673990|gb|EEX60811.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677005|gb|EEX63826.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260872240|gb|EEX79309.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|260917394|gb|EEX84255.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260918715|gb|EEX85368.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|260922005|gb|EEX88573.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261292475|gb|EEX95971.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261298369|gb|EEY01866.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261299433|gb|EEY02930.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261302640|gb|EEY06137.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261736435|gb|EEY24431.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261739782|gb|EEY27708.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|262550817|gb|EEZ06978.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|262764135|gb|EEZ10167.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263000302|gb|EEZ12992.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092549|gb|EEZ16784.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|264659049|gb|EEZ29310.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|294818951|gb|EFG35951.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297173703|gb|EFH33067.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|306273911|gb|EFM55738.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|326410465|gb|ADZ67529.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326553757|gb|ADZ88396.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 263

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + +     + +   IT+   ++   I ++  + +G W   +P +++   P+ +   +
Sbjct: 48  LRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDPYVKAANS 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 108 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLSNARMLG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP    +  +   TA G A   ++V E          + GLG  I ++ 
Sbjct: 164 MNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLG------SSAGLGYLIHQAE 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G+L++  FVL ++           +W P
Sbjct: 218 GVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRP 255



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+           ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 41  ATPGDVALRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 101 YVKAANSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   ++  Q    + +P ++  +  ++  ++       V  E +         
Sbjct: 153 QTVLSNARMLGMNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   ML +   + L D    ++ + ++VW  K
Sbjct: 208 -GLGYLIHQAEGVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRPK 256


>gi|295397623|ref|ZP_06807698.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
 gi|294974086|gb|EFG49838.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
          Length = 216

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 77/189 (40%), Gaps = 15/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ + ++       L ++  ++  +++ I+ ++Q+IP L  L   + +          
Sbjct: 24  LISLGLGVIVAVPLGILLSQVPKVANIVISIVSVLQTIPTLALLALMIPFLGVG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             ++ AI A+F   +  +  + Y  + N+  DL + ++   L   Q    + +P ++P +
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYLGMSNVNPDLLDAAKGMGLKRMQIIRQVQLPLAVPVI 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S      +   +  I  G       G+G  I   +       IL   + +  + 
Sbjct: 136 MAGIRLSTVYVIAWTTLASYIGGG-------GLGDMIFNGLNLFRPDLILGGTIPVTILA 188

Query: 253 FLYDQLLFR 261
            + D ++ R
Sbjct: 189 VIVDLVMAR 197



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 69/203 (33%), Gaps = 11/203 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F       VI L    ++  ++ + +  I+ +P+GI +   P +++ +     +L  
Sbjct: 1   MQEFIASQGSEVIRLLWEHIYMSLISLGLGVIVAVPLGILLSQVPKVANIVISIVSVLQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P      L++  +        +   + +   +   IL N   G S    D  + A    
Sbjct: 61  IPTLALLALMIPFLGVG----KVPAIVALFIYSLLPILRNTYLGMSNVNPDLLDAAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP   P  + G   +       + ++     G       GLG  I    
Sbjct: 117 LKRMQIIRQVQLPLAVPVIMAGIRLSTVYVIAWTTLASYIGGG-------GLGDMIFNGL 169

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
                  ++ G + +    + ++
Sbjct: 170 NLFRPDLILGGTIPVTILAVIVD 192


>gi|331269083|ref|YP_004395575.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum BKT015925]
 gi|329125633|gb|AEB75578.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum BKT015925]
          Length = 227

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT F  ++  ++++I+   + I + +       + P+  +L A P     P+
Sbjct: 26  GTLFKHISITCFETILGFLLSTILGTIIAILLWWSDFACKVLDPYLVVLNALPKVALAPI 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    + N++ G      D  ++  +F  T ++  RY
Sbjct: 86  IIFWVG----NGTSAIVLITVLISIVVTILNILNGFKEIDEDKIKLLKTFGATKFQILRY 141

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G +W   I+ E        +   GLG  I    +      V+
Sbjct: 142 LVIPATIPTIIASLKINVGLSWVGVIMGEFL------VAKNGLGFLIIFGGQISQLDMVM 195

Query: 557 LGVLIMCCFVLALNRFL 573
           + +LI+      +   +
Sbjct: 196 MSILILSILAFLMYELV 212



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 89/218 (40%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++ S T    +   ++S +   + A L   S     VL 
Sbjct: 9   TSTPSRMWKSLIKIYSEGTLFKHISITCFETILGFLLSTILGTIIAILLWWSDFACKVLD 68

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N     V+   L +I             ++      I
Sbjct: 69  PYLVVLNALPKVALAPIIIFWVGNGTSAIVLITVLISIVV--------TILNILNGFKEI 120

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  + +Q   YL +P ++P ++ ++ +++   W  V+  E +V  +    
Sbjct: 121 DEDKIKLLKTFGATKFQILRYLVIPATIPTIIASLKINVGLSWVGVIMGEFLVAKN---- 176

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  + FL  +L+
Sbjct: 177 --GLGFLIIFGGQISQLDMVMMSILILSILAFLMYELV 212


>gi|325685676|gb|EGD27756.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 220

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L  +  ++I+ +         A+ R L   ++ I +++Q+IP L  L+  ++    
Sbjct: 26  ARHFLISIYGVLIAAVIGIPVGLAIARHRTLSNTVIGIANVIQTIPSLAMLSIIMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+ ++L + ++   ++ WQ  + + +
Sbjct: 86  GV--------NTVIVTVFLYSLLPIIKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P SM  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 138 PLSMSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATNGGAIILAG 190

Query: 246 LTMLGVIFLYDQLLF 260
                ++ +   L+ 
Sbjct: 191 ALPTALMAIISDLVL 205



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 19/222 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ   Y + +     +        I+++     ++IA++I IPVG+ I     +S+ + 
Sbjct: 6   TWQQFWYYLANNGSYVLSQFARHFLISIY----GVLIAAVIGIPVGLAIARHRTLSNTVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +   +   I+ N   G      + 
Sbjct: 62  GIANVIQTIPSLAMLSIIMLGLGLGVNT----VIVTVFLYSLLPIIKNTYTGMQNVDKNL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A    +T W+    + +P      + G   A   A   + +      G       GL
Sbjct: 118 MDAAKGMGMTRWQSLYMVEIPLSMSVIMAGIRNALVVAIGITAIGAFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
           G  I   T   +   ++L       +M      +  FL   L
Sbjct: 171 GDIIIRGTNATNGGAIILAGALPTALMAIISDLVLGFLERRL 212


>gi|311031582|ref|ZP_07709672.1| putative glycine/betaine/carnitine/choline ABC transporter,
           permease/substrate-binding protein Opu [Bacillus sp.
           m3-13]
          Length = 507

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 25/205 (12%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           + A+ I++  +     L  +  R+   ++ I  +MQ+IP L  L   
Sbjct: 14  QLWTALLEHIQISVIALAIAVFISVPLGVLLTRKERIAEPIIGITAVMQTIPSLALLGLL 73

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +      +        + A+ A+F   +  +  + Y  +  +   L E +++  ++  ++
Sbjct: 74  IPLVGIGF--------VPAVIALFLYALLPILRNTYTGIKEVDPSLREAAKAMGMTSMKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIK 234
            + + +P ++P ++  +  +M           ++++G   I    IG+      I L I 
Sbjct: 126 LFRVELPLALPVIMAGIRTAM-----------VLIIGTATIVAL-IGAGGLGSLILLGID 173

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   IL   +    +  L+D +L
Sbjct: 174 RNDNALILLGAIPAALLAILFDIIL 198



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 13/194 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ + IA  I +P+G+ +  +  I+  I     ++   P+     L++  V        +
Sbjct: 27  VIALAIAVFISVPLGVLLTRKERIAEPIIGITAVMQTIPSLALLGLLIPLVGIGF----V 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       IL N   G        +E A +  +T  +    + LP   P  + G 
Sbjct: 83  PAVIALFLYALLPILRNTYTGIKEVDPSLREAAKAMGMTSMKRLFRVELPLALPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + +  +   G +               ++     ++LG +      +  +
Sbjct: 143 RTAMVLIIGTATIVALIGAGGLGSLIL-------LGIDRNDNALILLGAIPAALLAILFD 195

Query: 571 RFLWHPLYLYGTRC 584
             L   +     R 
Sbjct: 196 IIL--RMIETAARK 207


>gi|225181395|ref|ZP_03734839.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167976|gb|EEG76783.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 271

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 10/200 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +    +  +   +     IT+F  VV   + ++I   + + + +   IS+ + P+  +
Sbjct: 62  RVMRTLVSLHNEGNLYMHTGITVFETVVGFTLGTVIGTVIAVILWWSKFISAVLDPYLVV 121

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P     P+++             +  + +  +    +  V +G S    +  ++  
Sbjct: 122 LNSLPKIALGPIIIVWAGQG----MTAIIAMALLISVVVTILGVYSGFSQVDANKIKLLQ 177

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           SF  + W+  + +ILP   P  ++      G +W   IV E        +   GLG  I 
Sbjct: 178 SFGASRWQILKKVILPASVPTIISALKINVGLSWVGVIVGEFL------VSRAGLGYLIV 231

Query: 545 ESTEKGSFPEVVLGVLIMCC 564
              +      V+ GV+I+  
Sbjct: 232 YGGQVFRLDLVMTGVIILSV 251



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 94/255 (36%), Gaps = 21/255 (8%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLP 62
              +RI+      +  +L++G I +      +       T+ P  ++  +    +  +L 
Sbjct: 18  LRRQRIYRLQIFAVQILLLLGFIALWEVAATQRWIDPFITSQPSRVMRTLVSLHNEGNLY 77

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +   T    +    +  +   V A +   S+ +  VL P L ++ S+P +      +V+
Sbjct: 78  MHTGITVFETVVGFTLGTVIGTVIAVILWWSKFISAVLDPYLVVLNSLPKIALGPIIIVW 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                   +  A L ++              +Y     +  +  ++ +SF  S WQ    
Sbjct: 138 AGQGMTAIIAMALLISVVV--------TILGVYSGFSQVDANKIKLLQSFGASRWQILKK 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+P ++  + +++   W  V+  E +V         G+G  I    +   L  ++
Sbjct: 190 VILPASVPTIISALKINVGLSWVGVIVGEFLV------SRAGLGYLIVYGGQVFRLDLVM 243

Query: 243 YAMLTMLGVIFLYDQ 257
             ++ +     +  Q
Sbjct: 244 TGVIILSVAAAVMYQ 258


>gi|170738422|ref|YP_001767077.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168192696|gb|ACA14643.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 292

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 85/239 (35%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L A  ++  +    L            V+     +    +P+ A  +   +     I + 
Sbjct: 49  LAALAILWEVYGRWLDNPLLFPTFGATVEAFGSAILSGEIPRKALISLETLAIGYGIGIG 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+A  SR    +L  +  +   +P +  L   +++F             + +F 
Sbjct: 109 LAALLTTIAIGSRIGTDLLETLTAMFNPLPAIALLPLALIWFGLGQG--------SVVFV 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + +    ++   L  V  ++ L        + +P + P ++  + +  +
Sbjct: 161 LVHSVLWAIALNTHAGFRSVSNTLRMVGLNYGLRNLSLVRAILIPAAFPSILTGLKVGWA 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +       G YI       +   +   + T++ +    + ++F
Sbjct: 221 FAWRTLIAAELVFGVSSGSGGL--GWYIFENRNALETTNVFAGLFTVILIGLFVENVIF 277



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 9/234 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIA-SII 400
            L I W      +   + + + G  V  F    +   +     I++  + +   I   + 
Sbjct: 51  ALAILWEVYGRWLDNPLLFPTFGATVEAFGSAILSGEIPRKALISLETLAIGYGIGIGLA 110

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +   I IG     +  ++    +    PA    PL +        +    +  +++   
Sbjct: 111 ALLTTIAIG-SRIGTDLLETLTAMFNPLPAIALLPLALIWFGLGQGS----VVFVLVHSV 165

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W I  N  AG  +  N  + V  ++ +      R I++P  FP  +TG       AW  
Sbjct: 166 LWAIALNTHAGFRSVSNTLRMVGLNYGLRNLSLVRAILIPAAFPSILTGLKVGWAFAWRT 225

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
            I +E+             G YI E+        V  G+  +    L +   ++
Sbjct: 226 LIAAELVFGVSSGSGGL--GWYIFENRNALETTNVFAGLFTVILIGLFVENVIF 277


>gi|145589364|ref|YP_001155961.1| binding-protein-dependent transport systems inner membrane
           component [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047770|gb|ABP34397.1| binding-protein-dependent transport systems inner membrane
           component [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 271

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 15/243 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +    I  ++ F  +  I+       +     P  I      ++  +S+      T    
Sbjct: 18  KSLIQILSVVIFFAIWQILAEFGFISEFLVGTPFGIWKRFIASVMDYSIFIDTGYTLWEA 77

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   VI  L       L   S+ +  ++ P +  + S+P +      +++F         
Sbjct: 78  LLGFVIGTLVGTSIGLLLWYSKWISQIVEPFIVAINSVPKIALAPIILLWFGTGLG---- 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A +  + +        + +Q+     +DL+ +  S      Q F  + VP SMP +
Sbjct: 134 ----AKVVLVVSMTAIIALIAAHQATKEADKDLQSLLYSMGADRKQIFRQVVVPSSMPAI 189

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V N  +++  G    V  E I          G+G  I  A    +L ++   +  ++ V 
Sbjct: 190 VSNFRINVGFGLVGAVVGEFIS------SKAGLGHMIYNASSLYELNSVWVGLFMLMIVG 243

Query: 253 FLY 255
           F  
Sbjct: 244 FFL 246



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 10/192 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T++  ++  +I +++   +G+ + +   IS  ++PF   + + P     P++
Sbjct: 65  SIFIDTGYTLWEALLGFVIGTLVGTSIGLLLWYSKWISQIVEPFIVAINSVPKIALAPII 124

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +           + +  +         L            D + +  S      + +R +
Sbjct: 125 LLWFGTGLGAKVVLVVSMTAIIA----LIAAHQATKEADKDLQSLLYSMGADRKQIFRQV 180

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  V+      G     ++V E  S         GLG  I  ++       V +
Sbjct: 181 VVPSSMPAIVSNFRINVGFGLVGAVVGEFIS------SKAGLGHMIYNASSLYELNSVWV 234

Query: 558 GVLIMCCFVLAL 569
           G+ ++      L
Sbjct: 235 GLFMLMIVGFFL 246


>gi|319781750|ref|YP_004141226.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167638|gb|ADV11176.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 271

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 10/225 (4%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            + W   V   AI          +          ++    +T   ++   +++ ++ I +
Sbjct: 36  IVLWEAAVRIFAISAFIIPAPSEIAKSLVAQWGTLMQATLVTAGEILFGFLVSVVVGIAI 95

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            + I     +   + P   L    P     P+ +    Y  L P + L L++     + +
Sbjct: 96  ALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYG-LAPKIGLILVI---AFFPV 151

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             +++AG  +       + +S   +  +    I +P   P  + G   A   +   +IV 
Sbjct: 152 TLSMLAGMQSVDRSLLSLMNSVGASPTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVG 211

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           E A        + GLG  I  ++ +     V   +L++    +A 
Sbjct: 212 EFAG------ASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAF 250



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 96/253 (37%), Gaps = 17/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL   +V+    + +  I    +P        +     +L Q    T   +L   ++S++
Sbjct: 31  LLLVTIVLWEAAVRIFAISAFIIPAPSEIAKSLVAQWGTLMQATLVTAGEILFGFLVSVV 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +  +   LG  L P++ + Q++P +      +++F      K        I  
Sbjct: 91  VGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPK--------IGL 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T SM   + ++ R L  +  S   S  Q  + + VP S+P L+    ++ +
Sbjct: 143 ILVIAFFPVTLSMLAGMQSVDRSLLSLMNSVGASPTQILFRIRVPHSLPNLMAGTKIAAT 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
                 +  E     D      G+G  I  A  + D   +  A+L +  +   +     +
Sbjct: 203 LSVIGAIVGEFAGASD------GLGYVIQFASTQLDTALVFAALLLVSVLGIAFYYAAEI 256

Query: 259 LFRPMIVWSNKFR 271
           L R ++ W+ KF 
Sbjct: 257 LERIVVPWAPKFS 269


>gi|221640431|ref|YP_002526693.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221161212|gb|ACM02192.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 254

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLII 395
           V     + +  +  G+     W +                    + +G  T++R V  + 
Sbjct: 9   VPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAYARYWELFLTMGWQTLWRTVAGLG 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A I    +G+ +GF       + P      A P     P++       H    + ++ L
Sbjct: 69  LAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQHDFNTVLMAFL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   + + I  +V  G S    +++++  S   +    +  I LP   P +      +  
Sbjct: 129 I---SFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPEFFGALKVSVT 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A+  + + E+ S         GLGA        G +P +   ++ +    + L
Sbjct: 186 LAFIGTNLVEIVSPHGR-----GLGALFKSGETNGDYPLMFAVLIALAFLGILL 234



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 91/261 (34%), Gaps = 18/261 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R+I   +  +L F+ +  GI+        +   P D+                  +T  R
Sbjct: 5   RKIGVPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAYARY--WELFLTMGWQTLWR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++ + ++++F  +   +   SR     L P+L    +IP    +    + F+  +    
Sbjct: 63  TVAGLGLAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQH---- 118

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +   +   F    + +  S+   L  +  +  ++ RS   S    FW + +P ++P 
Sbjct: 119 ---DFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPE 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + +S++  +      E++          G+G+         D   +   ++ +  +
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIVS-----PHGRGLGALFKSGETNGDYPLMFAVLIALAFL 230

Query: 252 IFLY---DQLLFRPMIVWSNK 269
             L       L R    W+ +
Sbjct: 231 GILLYYAVVALERIFAGWAER 251


>gi|167465079|ref|ZP_02330168.1| glycine/betaine transport system permease protein [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 209

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 15/184 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +   L        L +   +  +L+       LAA+ +RL  V++ I +I+Q  P L
Sbjct: 8   IRENWVDLLSLTYDHILMVFIGIFSALVVGIPLGMLAARRKRLAPVIMTIGNILQVFPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   ++ F   +   VIG        +F   +  +  + Y  L  +   + E  R   
Sbjct: 68  AMLVLLMIVFGLGFKTVVIG--------LFLYSLMPIIRNTYVGLKQVDPSITEAGRGVG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  Q  + + +P S+P ++  + ++          + ++  G       G+G  I   I
Sbjct: 120 MSSTQLLFKVQLPLSLPFIMTGIRVAAVIAIGVATIAPLVGGG-------GLGREIYSGI 172

Query: 234 KEQD 237
              +
Sbjct: 173 NMDN 176



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 4/165 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  ++  ++ + ++ L    +  V + I  A ++ IP+G+    R  ++  I     +L 
Sbjct: 3   LFWNYIRENWVDLLSLTYDHILMVFIGIFSALVVGIPLGMLAARRKRLAPVIMTIGNILQ 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            FP+     L++           + L       +   I+ N   G         E     
Sbjct: 63  VFPSLAMLVLLMIVFGLGFKTVVIGL----FLYSLMPIIRNTYVGLKQVDPSITEAGRGV 118

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            ++  +    + LP   P+ +TG   A   A   + ++ +   G 
Sbjct: 119 GMSSTQLLFKVQLPLSLPFIMTGIRVAAVIAIGVATIAPLVGGGG 163


>gi|126462024|ref|YP_001043138.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126103688|gb|ABN76366.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 266

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 7/195 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++      +  A ++ IP+G  +G    +   +  F   LAA P   F PL++  +    
Sbjct: 73  SLLTYGTGLGAAVLVGIPLGALMGMMRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLG- 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  ++++  G    I+ N  AG  A   +  E+A S   +  R   +I+LPG  P+
Sbjct: 132 ---TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPF 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G           ++V+E+ +            A    +     +  +VL +  +   
Sbjct: 189 LVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADYFVIVLALAAIGVI 245

Query: 566 VLALNRFLWHPLYLY 580
           V    R L   L  +
Sbjct: 246 VTESLRLLEGRLSRW 260



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 11/208 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     ++ L   + +  ++L       L    R LG  L   +  + + P + F+  
Sbjct: 64  GRLQTAIVQSLLTYGTGLGAAVLVGIPLGALMGMMRLLGRTLDIFVFALAATPRVAFIPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V               A    +F   V  +  + Y  +     +L E++RS   S  +
Sbjct: 124 IIVLLGLG--------TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAAR 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P LV  + +  + G    V +E+      +  L    +      +  D 
Sbjct: 176 IQLHIVLPGALPFLVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADY 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             I+ A+  +  ++    +LL   +  W
Sbjct: 233 FVIVLALAAIGVIVTESLRLLEGRLSRW 260


>gi|310642439|ref|YP_003947197.1| abc transporter permease protein [Paenibacillus polymyxa SC2]
 gi|309247389|gb|ADO56956.1| ABC transporter permease protein [Paenibacillus polymyxa SC2]
          Length = 277

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I   +        L  +   T    ++  ++  L   + A L   S  L  VL P +
Sbjct: 63  PSKIFTQIGKDAVSGELWGHVGVTVGETMAGFLLGTLLGTLLAVLIWWSPFLSRVLDPYM 122

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  S+P +      +V F   +         A +    +  V   T  +Y S   +  +
Sbjct: 123 VVFNSMPKVALGPIFIVMFGAGFT--------AILMTTLSITVIITTLVVYNSFQEVDPN 174

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +V R+F  +    F  + +P S P +V  + +++   W  V+  E +V  +      G
Sbjct: 175 LVKVVRTFGGTRRDTFQKVILPASFPAIVSTLKVNVGMAWVGVIVGEFLVAKN------G 228

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  I    +  +   ++ ++L +  V  L  Q +
Sbjct: 229 LGYLIIYGFQVFNFTLVMSSLLIIAVVATLMYQAV 263



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 14/259 (5%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY---IVNHF 371
           +  + L             L +  +++ +L +F    + G    I      Y   I    
Sbjct: 11  RWIQGLHQTYLRNRRMQQWLVTGVQIAILLLLFVLWEIAGRLKWIDVLLFSYPSKIFTQI 70

Query: 372 TYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               V   +W    +T+   +   ++ +++   + + I + P +S  + P+  +  + P 
Sbjct: 71  GKDAVSGELWGHVGVTVGETMAGFLLGTLLGTLLAVLIWWSPFLSRVLDPYMVVFNSMPK 130

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+ +           +    + +  T       V         +  +V  +F  T 
Sbjct: 131 VALGPIFIVMFGAGFTAILMTTLSITVIIT----TLVVYNSFQEVDPNLVKVVRTFGGTR 186

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              ++ +ILP  FP  V+      G AW   IV E        +   GLG  I    +  
Sbjct: 187 RDTFQKVILPASFPAIVSTLKVNVGMAWVGVIVGEFL------VAKNGLGYLIIYGFQVF 240

Query: 551 SFPEVVLGVLIMCCFVLAL 569
           +F  V+  +LI+      +
Sbjct: 241 NFTLVMSSLLIIAVVATLM 259


>gi|240144324|ref|ZP_04742925.1| ABC transporter permease [Roseburia intestinalis L1-82]
 gi|257203666|gb|EEV01951.1| ABC transporter permease [Roseburia intestinalis L1-82]
 gi|291535559|emb|CBL08671.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis M50/1]
 gi|291540796|emb|CBL13907.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Roseburia intestinalis XB6B4]
          Length = 285

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--- 381
               ++  +     R   +L      +   V+  + W    Y  +         V W   
Sbjct: 23  RREEKHRRKQKKGIRAGRILLGVAILLFWEVSARLGWIDDYYWSSPSLIAQTAIVQWKEK 82

Query: 382 ----LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   T    +   +  ++    +G+   +    +   +P+  +  A P     P++
Sbjct: 83  NLAYDIYFTSMSTIGGFLAGTLGGAVLGLSFWWSKTFAKIFEPYLVMFNAIPKLALAPIL 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +  +   L+ +           ++G        + +  S     W+ +  +
Sbjct: 143 IVLFGIGFSSKVMLAFLMTVISCA----LATVSGVENVDESMETLLYSLGAARWQVFGKV 198

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P + P+ +         A   +IV E  + G       GLG  +  +        V +
Sbjct: 199 VVPAVLPWMLGSLRINISLALAGAIVGEFIASG------HGLGRMVIYAGTILDTTLVWV 252

Query: 558 GVLIMCCFVLAL 569
           GV+++    + +
Sbjct: 253 GVIVLSLLAMVM 264



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  I     +     +L      T++  +   +   L   V       S+    +  
Sbjct: 65  WSSPSLIAQTAIVQWKEKNLAYDIYFTSMSTIGGFLAGTLGGAVLGLSFWWSKTFAKIFE 124

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  +IP L      +V F   +  KV+          F   V +   +    + N+
Sbjct: 125 PYLVMFNAIPKLALAPILIVLFGIGFSSKVM--------LAFLMTVISCALATVSGVENV 176

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              +E +  S   + WQ F  + VP  +P ++ ++ +++S      +  E I  G     
Sbjct: 177 DESMETLLYSLGAARWQVFGKVVVPAVLPWMLGSLRINISLALAGAIVGEFIASG----- 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  +  A    D   +   ++ +  +  +    +
Sbjct: 232 -HGLGRMVIYAGTILDTTLVWVGVIVLSLLAMVMYFAV 268


>gi|284990966|ref|YP_003409520.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284064211|gb|ADB75149.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 285

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 10/168 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + + IAS+  I  GI IG    +        + L   P+    PL         
Sbjct: 88  TLQGWALGLAIASVAGIVSGIVIGSSHLLRQLTASTIEFLRPIPSVALIPLAALLFGTAI 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+++   W +L  V+ G        ++ A ++  + W   RY+  P   PY
Sbjct: 148 ESK----LMLVVYAAFWQVLIQVLYGVQDVDPVAQDTARAYRFSAWARIRYVTWPTALPY 203

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            +TG   A   A   ++ +E+       +   GLG+ +A +   G+  
Sbjct: 204 VITGLRLAAAVALILAVTAELV------IGNPGLGSRLAVAQSSGAVA 245



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 73/194 (37%), Gaps = 14/194 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
               +I   +   L   +       T       + I+ +   V   +   S  L  +   
Sbjct: 63  PTSSEIASALAGELAEVAFWTALLDTLQGWALGLAIASVAGIVSGIVIGSSHLLRQLTAS 122

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ ++ IP +  +    + F      K++         +  +  W +   +   + ++ 
Sbjct: 123 TIEFLRPIPSVALIPLAALLFGTAIESKLM--------LVVYAAFWQVLIQVLYGVQDVD 174

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
              ++ +R++R S W +  Y+  P ++P ++  + ++ +      V +E+++        
Sbjct: 175 PVAQDTARAYRFSAWARIRYVTWPTALPYVITGLRLAAAVALILAVTAELVIGN------ 228

Query: 223 PGIGSYIALAIKEQ 236
           PG+GS +A+A    
Sbjct: 229 PGLGSRLAVAQSSG 242


>gi|259418325|ref|ZP_05742243.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259345720|gb|EEW57564.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 258

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 93/223 (41%), Gaps = 14/223 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + L G+ +  +P  I+       +V  + ++   T   +L  ++I ++   + A   A 
Sbjct: 34  VVSLTGLPKFILPGPIIVAEAWWDNVAIIAEHTLVTASEVLIGLLIGVILGVITAVQLAT 93

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR   +++ PIL   Q++P+        ++F      K+  A L   F         +T 
Sbjct: 94  SRIARVLVQPILVFTQALPVFALAPILTLWFGFGLWSKIAMAVLIIYF--------PVTA 145

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           S +  L   P+   +++R+ + S  +  W++ +P ++P L   + ++       V A   
Sbjct: 146 SFFDGLMRTPQGYLDLARTMQASPSRILWHIRIPAALPSLASGIRLA------AVYAPIG 199

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            V+G+ V    G+G  + LA        +  AMLT+     L 
Sbjct: 200 AVIGEWVGASRGLGYLMLLANGRAKTDLMFAAMLTLGVFSVLL 242



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 75/222 (33%), Gaps = 10/222 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  VV    +         IV    + +V  +     +T   V++ ++I  I+ +   + 
Sbjct: 31  WQAVVSLTGLPKFILPGPIIVAEAWWDNVAIIAEHTLVTASEVLIGLLIGVILGVITAVQ 90

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +         +QP      A P     P++     +   +      L++ F     +  +
Sbjct: 91  LATSRIARVLVQPILVFTQALPVFALAPILTLWFGFGLWSKIAMAVLIIYF----PVTAS 146

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G    P  + ++A +   +  R   +I +P   P   +G   A   A   +++ E  
Sbjct: 147 FFDGLMRTPQGYLDLARTMQASPSRILWHIRIPAALPSLASGIRLAAVYAPIGAVIGEWV 206

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   + GLG  +  +  +     +   +L +  F + L
Sbjct: 207 G------ASRGLGYLMLLANGRAKTDLMFAAMLTLGVFSVLL 242


>gi|88854325|ref|ZP_01128992.1| putative ABC transporter membrane protein [marine actinobacterium
           PHSC20C1]
 gi|88816133|gb|EAR25988.1| putative ABC transporter membrane protein [marine actinobacterium
           PHSC20C1]
          Length = 276

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 81/266 (30%), Gaps = 23/266 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------ 381
           P+      SN      L +     +      +AW  +          +V           
Sbjct: 14  PDRRPIKTSNTTWRIRLTLVILAFLLIWQAAVAWFKLIPSNFLPAPTEVSVAFGELVVNP 73

Query: 382 ----LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   ++  + V + +A  + + VGI +G  P +   + PF  LL + P     P+ 
Sbjct: 74  NFWSALAFSLGNMAVGLAMAIGVGVFVGIALGLSPALRITVAPFLWLLYSTPKVALAPIF 133

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     +       L+     + +L N + G           A  +  + +     I
Sbjct: 134 ILALGLGSASK----IGLVFLLAVFPVLLNTMEGTLTVSPSLVNAARVYGASRFSVGWKI 189

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P   P+ + G   A    +   I+ E            G+G  +  +  K    E + 
Sbjct: 190 IAPATLPFSLVGIQRAVALGFTGEILGEFLGG------AGGIGHMLEYAAYKFLMDEALA 243

Query: 558 GVLIMCCF---VLALNRFLWHPLYLY 580
            V +M       L L   +   L  +
Sbjct: 244 IVFVMVIVSNLSLGLISIVRRKLAPW 269



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 85/269 (31%), Gaps = 21/269 (7%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVI----GIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           +  P   S   +     L+    ++     +    L        P ++       +   +
Sbjct: 15  DRRPIKTSNTTWRIRLTLVILAFLLIWQAAVAWFKLIPSNFLPAPTEVSVAFGELVVNPN 74

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                + +   M   + +++            S  L + + P L ++ S P +      +
Sbjct: 75  FWSALAFSLGNMAVGLAMAIGVGVFVGIALGLSPALRITVAPFLWLLYSTPKVALAPIFI 134

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +        K        I  +F   V+ +  +  +    +   L   +R +  S +   
Sbjct: 135 LALGLGSASK--------IGLVFLLAVFPVLLNTMEGTLTVSPSLVNAARVYGASRFSVG 186

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W +  P ++P  +  +  +++ G+   +  E +          GIG  +  A  +  +  
Sbjct: 187 WKIIAPATLPFSLVGIQRAVALGFTGEILGEFLGGAG------GIGHMLEYAAYKFLMDE 240

Query: 241 ILYAMLTMLGVIFL---YDQLLFRPMIVW 266
            L  +  M+ V  L      ++ R +  W
Sbjct: 241 ALAIVFVMVIVSNLSLGLISIVRRKLAPW 269


>gi|146283236|ref|YP_001173389.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
 gi|145571441|gb|ABP80547.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
          Length = 278

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 14/238 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
                    +  +LV      LL            +      + + +  ++   T    L
Sbjct: 30  DRLAPWLAFVVLLLVWEAACRLLTLPSFVLPSPSAILAATQKVGLGAWAEHIFATLRVTL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +S+L     A   A SR +   L P+L I+QS          +V    +    +  
Sbjct: 90  MGYGLSILIGIPLAIALASSRLMSRTLYPLLVIVQST--------PIVAVAPIIVVVMGA 141

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L  +F  F    + +  S    L   P +L E+SRS   S  +++  + +P+++P L 
Sbjct: 142 GDLPRVFITFLIAFFPIVVSCVTGLLATPEELVELSRSLGASKAREYRNIRLPYAIPHLF 201

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + +S++      V +E +          G+G +I  +     +     A++ ++ +
Sbjct: 202 SALRISITLAVIGAVVAEFVA------AEKGLGYFINFSTSMFQVPQAFAALMMLVVI 253



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 88/259 (33%), Gaps = 15/259 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            +     +  +       + L+  +++   ++  +    V       +   S        
Sbjct: 5   TISAARSSRTMPTIKPRTHRLKTQADRLAPWLAFVVLLLVWEAACRLLTLPSFVLPSPSA 64

Query: 372 TYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                  V           T+   ++   ++ +I IP+ I +     +S  + P   ++ 
Sbjct: 65  ILAATQKVGLGAWAEHIFATLRVTLMGYGLSILIGIPLAIALASSRLMSRTLYPLLVIVQ 124

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P++V  +    L        +      + I+ + + G  A P +  E++ S 
Sbjct: 125 STPIVAVAPIIVVVMGAGDL----PRVFITFLIAFFPIVVSCVTGLLATPEELVELSRSL 180

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  R +R I LP   P+  +    +   A   ++V+E  +         GLG +I  S
Sbjct: 181 GASKAREYRNIRLPYAIPHLFSALRISITLAVIGAVVAEFVAAEK------GLGYFINFS 234

Query: 547 TEKGSFPEVVLGVLIMCCF 565
           T     P+    ++++   
Sbjct: 235 TSMFQVPQAFAALMMLVVI 253


>gi|146279005|ref|YP_001169164.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145557246|gb|ABP71859.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 254

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 82/242 (33%), Gaps = 12/242 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITM 387
           + L     V     + +  +  G+     W +                    + +G  T+
Sbjct: 1   MDLARKIGVPLAAILMFLALWEGIVWWNGWPNYKMASPSDLPPAYARYWELFLTMGWQTL 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +R V  + +A +    +G+ +GF       + P      A P     P++       H  
Sbjct: 61  WRTVAGLGLAVLFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQHDF 120

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + ++ L+   + + I  +V  G S    +++++  S   +    +  I LP   P + 
Sbjct: 121 NTVLMAFLI---SFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPEFF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                +   A+  + + E+ S         GLGA        G +P +   ++ +    +
Sbjct: 178 GALKVSVTLAFIGTNLVEIVSPHGR-----GLGALFKSGETNGDYPLMFAVLIALAFLGI 232

Query: 568 AL 569
            L
Sbjct: 233 LL 234



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 93/263 (35%), Gaps = 18/263 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           ++R+I   +  +L F+ +  GI+        +   P D+                  +T 
Sbjct: 3   LARKIGVPLAAILMFLALWEGIVWWNGWPNYKMASPSDLPPAYARY--WELFLTMGWQTL 60

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            R ++ + +++LF  +   +   SR     L P+L    +IP    +    + F+  +  
Sbjct: 61  WRTVAGLGLAVLFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQH-- 118

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                +   +   F    + +  S+   L  +  +  ++ RS   S    FW + +P ++
Sbjct: 119 -----DFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTL 173

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P     + +S++  +      E++          G+G+         D   +   ++ + 
Sbjct: 174 PEFFGALKVSVTLAFIGTNLVEIVS-----PHGRGLGALFKSGETNGDYPLMFAVLIALA 228

Query: 250 GVIFLY---DQLLFRPMIVWSNK 269
            +  L       L R    W+ +
Sbjct: 229 FLGILLYYAVVALERIFAGWAER 251


>gi|294677185|ref|YP_003577800.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294476005|gb|ADE85393.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 272

 Score = 84.6 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 90/234 (38%), Gaps = 14/234 (5%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
                P+ ++  +   L    +      T  R+ ++  +++L   V   +   SRR+   
Sbjct: 53  SHAPGPQQVLPQLAEGLVSGRMLPDLGATLARVGASFALAMLAGTVLGIVLGLSRRVNDW 112

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
             P L I  +IP L  +    ++            E AAI A+  ++V  +   + + + 
Sbjct: 113 FDPWLTIWNNIPALVLIVLCYLWIGLN--------ETAAITAVALNKVPLVAVILREGVR 164

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
                L E++R F +    +  ++ +P  MP L+      +S  W  V+  E +      
Sbjct: 165 ARDPALSEMARVFGMGFVARHRHILIPQLMPHLIAAARAGVSLIWKVVLVVEFLAART-- 222

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
               G    I L  +  D+  +L      + V+   + L+  P+   +N++R E
Sbjct: 223 ----GSAFRIHLNFQMFDIAEVLAWAAAFVCVMLAVEWLILAPLSGRANRWRRE 272



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ RV     +A +    +GI +G    ++    P+  +    PA V   L    +  
Sbjct: 79  GATLARVGASFALAMLAGTVLGIVLGLSRRVNDWFDPWLTIWNNIPALVLIVLCYLWIGL 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +       +   +  G  A      E+A  F +      R+I++P + 
Sbjct: 139 ----NETAAITAVALNKVPLVAVILREGVRARDPALSEMARVFGMGFVARHRHILIPQLM 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +  A       W   +V E  +        TG    I  + +     EV+       
Sbjct: 195 PHLIAAARAGVSLIWKVVLVVEFLA------ARTGSAFRIHLNFQMFDIAEVLAWAAAFV 248

Query: 564 CFVLALNRFLWHPLYLYGTR 583
           C +LA+   +  PL     R
Sbjct: 249 CVMLAVEWLILAPLSGRANR 268


>gi|113475315|ref|YP_721376.1| binding-protein-dependent transport systems inner membrane
           component [Trichodesmium erythraeum IMS101]
 gi|110166363|gb|ABG50903.1| binding-protein-dependent transport systems inner membrane
           component [Trichodesmium erythraeum IMS101]
          Length = 285

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 76/200 (38%), Gaps = 5/200 (2%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+   +      T+   VV +++A    + + I       I   + P+A +L   P    
Sbjct: 71  QEWNALFMSLITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAVILQTTPIVAI 130

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +        +  + ++     + I+ N   G ++   +  ++   +  + W+ 
Sbjct: 131 SPLIIIWLRDNTFGALILCAWIV---AFFPIISNTTLGLNSVDKNLSDMFKLYGASPWQT 187

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             Y+  P   PY++ G   + G A   ++V+E  +        +G+   I  S+     P
Sbjct: 188 LIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAG--TGGTRSGIAYQILMSSYNLQIP 245

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +   + +     +A+  F 
Sbjct: 246 RMFAALFLTTGLGIAIFVFF 265



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 103/261 (39%), Gaps = 17/261 (6%)

Query: 3   LYNILPPFISRRIFPNIFDL-LAFVLVIGIINILLH-------GIQETTVPRDIVDIVPI 54
           L  ++      RI   +F + +   +++GII +L          I    +P  I+ I  +
Sbjct: 10  LQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLPGPILVIKTM 69

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             + ++L      T    + A+V+++    + + L A+++ +   L P   I+Q+ PI+ 
Sbjct: 70  IQEWNALFMSLITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAVILQTTPIVA 129

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +++  +   G +I       F       + +  +    L ++ ++L ++ + +  
Sbjct: 130 ISPLIIIWLRDNTFGALILCAWIVAF-------FPIISNTTLGLNSVDKNLSDMFKLYGA 182

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S WQ   YL  P ++P  +  + +S        V +E   V  T     GI   I ++  
Sbjct: 183 SPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEF--VAGTGGTRSGIAYQILMSSY 240

Query: 235 EQDLLAILYAMLTMLGVIFLY 255
              +  +  A+    G+    
Sbjct: 241 NLQIPRMFAALFLTTGLGIAI 261


>gi|237745335|ref|ZP_04575816.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 7_1]
 gi|256028282|ref|ZP_05442116.1| ABC transporter permease protein [Fusobacterium sp. D11]
 gi|289766214|ref|ZP_06525592.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. D11]
 gi|229432564|gb|EEO42776.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. 7_1]
 gi|289717769|gb|EFD81781.1| hydroxymethylpyrimidine transport system permease [Fusobacterium
           sp. D11]
          Length = 257

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + +L   + A +      L  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLSLGILIASLLAIIMDSFEILNRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +  +I   + I +     ++  + P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLSLGILIASLLAIIMDSFEILNRIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|190894435|ref|YP_001984728.1| putative nitrate/sulfonate/bicarbonate ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700096|gb|ACE94178.1| probable nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 278

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 92/238 (38%), Gaps = 6/238 (2%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L++     V  +L + W+  V    +          V +    D   +     +T     
Sbjct: 23  LRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKITF 82

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A +  +   I++     I     P A +L   P     PL++     Y  +  + 
Sbjct: 83  LSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILI----YAPSTQVA 138

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L +       + IL N++ G  +  ++   +   +  + W+   Y+ LP   PY++TG  
Sbjct: 139 LLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLR 198

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              G A  A++V+E A+          L   + E+  + + P +   +L++    +A+
Sbjct: 199 IGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAI 254



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 10/234 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +++I    + L G+    +P           D  +L      TT     +++++L+
Sbjct: 31  VIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKITFLSLMLALV 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A    +SR + +   P+  I+Q  PI+      ++Y            ++A +  
Sbjct: 91  GGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIY--------APSTQVALLIC 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  +M Q L ++  +L  +   +  S WQ   YL +P + P  +  + +   
Sbjct: 143 AFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLRIGGG 202

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E             +   +  A    ++  +  A+L +  +    
Sbjct: 203 LALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAI 254


>gi|148257315|ref|YP_001241900.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409488|gb|ABQ37994.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 261

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 78/222 (35%), Gaps = 19/222 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +        +     +     IT++  ++   I S+  + VG W   +P +++   P+ +
Sbjct: 44  VDVFAQVVKWFASGAIWKHLAITLWESILAFAIGSLGGVLVGFWFARKPLVAAVFDPYVK 103

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P  V  P+    +     +       L+ F     + FNV  G        ++ A
Sbjct: 104 MANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSTVVRDNA 159

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +   +  R++  P    +  +   T+ G A   ++V E            GLG  I
Sbjct: 160 RMLGMNERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAGLGYLI 213

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNR---------FLWHP 576
            ++        V  G+ ++  FV+ ++           +W P
Sbjct: 214 QQAEGVFDVAGVFAGMFVLSAFVILIDIGVTLVERRLLVWRP 255



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 90/251 (35%), Gaps = 20/251 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ LLA V V G I +          P D+   V       ++ ++ + T    + A  I
Sbjct: 20  LWQLLATVPVFGRILLPPFFFSN---PVDVFAQVVKWFASGAIWKHLAITLWESILAFAI 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L   +     A+   +  V  P + +  ++P +       ++       KV       
Sbjct: 77  GSLGGVLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLWLGLGIWSKVALGVTLV 136

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +F        F++YQ +  +   + + +R   ++  Q   ++  P ++  +  ++  
Sbjct: 137 FFIVF--------FNVYQGVKEVSTVVRDNARMLGMNERQLMRHVYWPSALSWMFSSLHT 188

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD-- 256
           S+       V  E +          G+G  I  A    D+  +   M  +   + L D  
Sbjct: 189 SVGFAVVGAVVGEYLG------SAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILIDIG 242

Query: 257 -QLLFRPMIVW 266
             L+ R ++VW
Sbjct: 243 VTLVERRLLVW 253


>gi|330992789|ref|ZP_08316733.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329760267|gb|EGG76767.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 267

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T   ++    I +I+ I +G+ IG    +     P+       P     P++V  + Y
Sbjct: 67  LVTCEEILAGFGIGAIVGIGLGVLIGQSRFLEQVFYPYLVAAQTVPKVAIAPILVIWLGY 126

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      ++      +  L N I G  A P +  E+  +   T W+ +     P   
Sbjct: 127 GLSSK----IVITATIAFFPALSNTIVGLQATPREQMEMLRACTATQWQIFCMARFPQAL 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY   G   A   +   +IV E            GLG  I +         V   +L++C
Sbjct: 183 PYIFAGLDVAAVLSVIGAIVGEFVG------ARAGLGYLILQMNFSFDMAGVFSILLVLC 236

Query: 564 CFVLAL---NRFLWHPLYLYGT 582
              + L      +   +  +  
Sbjct: 237 LIGICLHLAVGLVRRRVLFWAA 258



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 87/241 (36%), Gaps = 17/241 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G +  L         P  +V  + + +    L  +   T   +L+   I  +       L
Sbjct: 31  GAVRALHVPAIVLPAPSAVVQALWLEIRSGILWPHFLVTCEEILAGFGIGAIVGIGLGVL 90

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             +SR L  V  P L   Q++P +      V++       K++     A F   +     
Sbjct: 91  IGQSRFLEQVFYPYLVAAQTVPKVAIAPILVIWLGYGLSSKIVITATIAFFPALS----- 145

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
              +    L   PR+  E+ R+   + WQ F     P ++P +   + ++       V++
Sbjct: 146 ---NTIVGLQATPREQMEMLRACTATQWQIFCMARFPQALPYIFAGLDVA------AVLS 196

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
               +VG+ V    G+G  I       D+  +   +L +  +     L   L+ R ++ W
Sbjct: 197 VIGAIVGEFVGARAGLGYLILQMNFSFDMAGVFSILLVLCLIGICLHLAVGLVRRRVLFW 256

Query: 267 S 267
           +
Sbjct: 257 A 257


>gi|332286299|ref|YP_004418210.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330430252|gb|AEC21586.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 292

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 83/218 (38%), Gaps = 10/218 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            + V  +   +    L   A  +   +L      +    V   LA  +R    +L  +  
Sbjct: 73  IETVKALFEGIASGGLLLKAWTSIRVLLVGYAAGIGLAAVLTVLAITTRIGTDILETLTA 132

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           E + +F +  S +W +  + +    ++   L
Sbjct: 133 MFNPLPAIALLPLALIWFGLG--------EGSLVFVLVHSVLWAVALNTHSGFLSVSPTL 184

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
             V R++ L+G+     + +P +   ++  + +  +  W  ++A+E++    +       
Sbjct: 185 RMVGRNYGLTGFSYVRQILIPAAFASILSGLKIGWAFAWRTLIAAELVFGVSSGSGGL-- 242

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           G +I       ++ ++   +  ++ +    + ++F  +
Sbjct: 243 GWFIYENKNMLEIPSVFAGLFMVILIGLFVENVIFNSL 280



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 19/239 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           IF   +    A+     S G ++  +T   VL V +   I +  V+ ++ I + I     
Sbjct: 68  IFPTFIETVKALFEGIASGGLLLKAWTSIRVLLVGYAAGIGLAAVLTVLAITTRIGT--- 124

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
                       ++    +    PA    PL +        +    L  +++    W + 
Sbjct: 125 ----------DILETLTAMFNPLPAIALLPLALIWFGLGEGS----LVFVLVHSVLWAVA 170

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  +G  +     + V  ++ +TG+ + R I++P  F   ++G       AW   I +E
Sbjct: 171 LNTHSGFLSVSPTLRMVGRNYGLTGFSYVRQILIPAAFASILSGLKIGWAFAWRTLIAAE 230

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +             G +I E+      P V  G+ ++    L +   +++ L     R 
Sbjct: 231 LVFGVSSGSGGL--GWFIYENKNMLEIPSVFAGLFMVILIGLFVENVIFNSLEKCTIRR 287


>gi|261821082|ref|YP_003259188.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605095|gb|ACX87581.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 288

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 10/206 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    LP     +   +L   VI  L     + LA  +R    +L  +  +   +P + 
Sbjct: 78  DLASGELPHKMVVSLGTLLKGYVIGSLLALALSALAVSTRFGRDLLGTLTSMFNPLPAIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F           E + +F +  S +W M  + Y     +   L    R++ L
Sbjct: 138 LLPLALLWFGLG--------EKSLVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G++    + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 190 TGFRYISAILIPAALPSIISGLKIGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRN 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
           E     +   + +++ +  L + L+F
Sbjct: 248 ELYTDRVFAGLASVIIIGLLVEGLVF 273



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G        +    ++ +TG+R+   I++P   P  ++G  
Sbjct: 153 LVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYISAILIPAALPSIISGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFSTIERVTVKR 283


>gi|221639009|ref|YP_002525271.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221159790|gb|ACM00770.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 245

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 7/233 (3%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W      V  G+                   +      ++      +  A ++ IP+G  
Sbjct: 14  WGVASATVPRGLIPSPAATAEAAARLWAEGRLQTAIGQSLLTYGTGLGAAVLVGIPLGAL 73

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    +   +  F   LAA P   F PL++  +           ++++  G    I+ N
Sbjct: 74  MGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLG----TEAKAMIVFLGAVMPIVLN 129

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG  A   +  E+A S   +  R   +I+LPG  P+ V G           ++V+E+ 
Sbjct: 130 TYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVGLRLGATIGLINTVVAELY 189

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           +            A    +     +  +VL +  +   V    R L   L  +
Sbjct: 190 TAVTGLGGLL---ALYGNTFRMADYFVIVLALAAIGVIVTESLRLLEGRLSRW 239



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 11/208 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     ++ L   + +  ++L       L    R LG  L   +  + + P + F+  
Sbjct: 43  GRLQTAIGQSLLTYGTGLGAAVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPL 102

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V               A    +F   V  +  + Y  +     +L E++RS   S  +
Sbjct: 103 IIVLLGLG--------TEAKAMIVFLGAVMPIVLNTYAGVLARDGELIEMARSTGASAAR 154

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ +P ++P LV  + +  + G    V +E+      +  L    +      +  D 
Sbjct: 155 IQLHIVLPGALPFLVVGLRLGATIGLINTVVAELYTAVTGLGGLL---ALYGNTFRMADY 211

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             I+ A+  +  ++    +LL   +  W
Sbjct: 212 FVIVLALAAIGVIVTESLRLLEGRLSRW 239


>gi|162148425|ref|YP_001602886.1| nitrate transport permease nrtB [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161787002|emb|CAP56587.1| putative nitrate transport permease protein nrtB [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 331

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   +      ++  + V     + + I  G+ +G          PF +L+   P
Sbjct: 121 DVFLTDWKRLGDSLLHSLGLLAVGYATGATLGIATGVGLGRSRRFRYWALPFVRLIGPLP 180

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                PL +       L        LM  G+ + I     +G +A    + +VA +    
Sbjct: 181 PVALLPLAMVLFPSNWLASEA----LMTLGSGFPITVLTWSGVAAVDPAYYDVARTMGAR 236

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P    G     G ++   +V+E+          +GLG Y+  +   
Sbjct: 237 DRFLVLRVALPAAMPQIFVGLFMGLGMSFVVLVVAEMLG------VKSGLGFYMQWAQGW 290

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            ++P +   +L+M      L   L+ 
Sbjct: 291 AAYPNMYAALLVMSLMCTGLVTILFK 316



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 19/242 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VHSLPQYASRTTLRMLSAMVIS 79
             L +G+    +   +   +PR         LD        L      +   +       
Sbjct: 89  IALGLGLAAWEVAQAKLLLLPRPFFGTPQDLLDVFLTDWKRLGDSLLHSLGLLAVGYATG 148

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                       +SRR     +P + ++  +P +  L   +V F            LA+ 
Sbjct: 149 ATLGIATGVGLGRSRRFRYWALPFVRLIGPLPPVALLPLAMVLF--------PSNWLASE 200

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +     + +T   +  +  +     +V+R+           + +P +MP +   + M 
Sbjct: 201 ALMTLGSGFPITVLTWSGVAAVDPAYYDVARTMGARDRFLVLRVALPAAMPQIFVGLFMG 260

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   +  +V +EM+ V        G+G Y+  A        +  A+L M  +      +L
Sbjct: 261 LGMSFVVLVVAEMLGVKS------GLGFYMQWAQGWAAYPNMYAALLVMSLMCTGLVTIL 314

Query: 260 FR 261
           F+
Sbjct: 315 FK 316


>gi|329767733|ref|ZP_08259249.1| hypothetical protein HMPREF0428_00946 [Gemella haemolysans M341]
 gi|328838834|gb|EGF88428.1| hypothetical protein HMPREF0428_00946 [Gemella haemolysans M341]
          Length = 504

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 21/190 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I++        + + +++     + I  I Q+IP L  L   + +          
Sbjct: 26  LLSLIIAIFIAVPLGIIISGNKKTSEWFLQITGIFQTIPSLALLGLFIPFMGIG------ 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  S    L  I   LEE + +F ++  +K     +  +MP L
Sbjct: 80  --TLPAVVALVIYAIFPILQSTITGLSEIDPSLEEAATAFGMTKLEKLKKFKLALAMPIL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +  +            AS MI+   T   +I   G+GS+I L I   +   IL   ++  
Sbjct: 138 MSGVR----------TASIMIIGTATLAALIGAGGLGSFILLGIDRNNSALILIGAISSA 187

Query: 250 GVIFLYDQLL 259
            +  L+  L+
Sbjct: 188 ILAILFGLLI 197



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 14/186 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +IIA  I +P+GI I      S        +    P+     L +  +    L   +
Sbjct: 26  LLSLIIAIFIAVPLGIIISGNKKTSEWFLQITGIFQTIPSLALLGLFIPFMGIGTLPAVV 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL + I G S      +E A++F +T     +   L    P  ++G 
Sbjct: 86  ALVIYAIF----PILQSTITGLSEIDPSLEEAATAFGMTKLEKLKKFKLALAMPILMSGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFVL 567
            TA       + ++ +   G       GLG++I    ++ +   +++G +   I+     
Sbjct: 142 RTASIMIIGTATLAALIGAG-------GLGSFILLGIDRNNSALILIGAISSAILAILFG 194

Query: 568 ALNRFL 573
            L RFL
Sbjct: 195 LLIRFL 200


>gi|196233669|ref|ZP_03132510.1| binding-protein-dependent transport systems inner membrane
           component [Chthoniobacter flavus Ellin428]
 gi|196222339|gb|EDY16868.1| binding-protein-dependent transport systems inner membrane
           component [Chthoniobacter flavus Ellin428]
          Length = 346

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  +    ++  +I +  G+ IG+ P       P  +++   P     PL +       
Sbjct: 152 SLLLLTEGYLLGVLIGVVTGVCIGWFPGARYWGMPILKVVGPIPVTALIPLSMVVAP--- 208

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  +    L+     + +     +G S     + +VA +   +       + +P   P 
Sbjct: 209 -STTISAISLVALAVWFPVTMLTASGISNTRASYLDVARTLGASRSYLIFRVAIPAAMPN 267

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G     G ++   +V+E           +GLG Y+  +     + +V   ++IM  F
Sbjct: 268 IFIGLFMGLGTSFLTLVVAETVG------VKSGLGWYVGWAQGWAEYGKVYAALIIMAAF 321



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 14/245 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P I   L  + V  II   LH +     P     +  +  D   L      + L +    
Sbjct: 101 PIIAAALLLLSVAEIITAGLHLLPLPYFPSPASVLFELISDYDVLFDCTWHSLLLLTEGY 160

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++ +L   V               +PIL ++  IP+   +  ++V              +
Sbjct: 161 LLGVLIGVVTGVCIGWFPGARYWGMPILKVVGPIPVTALIPLSMVV--------APSTTI 212

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +AI  +  +  + +T      + N      +V+R+   S     + + +P +MP +   +
Sbjct: 213 SAISLVALAVWFPVTMLTASGISNTRASYLDVARTLGASRSYLIFRVAIPAAMPNIFIGL 272

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            M +   +  +V +E + V        G+G Y+  A    +   +  A++ M        
Sbjct: 273 FMGLGTSFLTLVVAETVGVKS------GLGWYVGWAQGWAEYGKVYAALIIMAAFFSTVM 326

Query: 257 QLLFR 261
            +LF+
Sbjct: 327 TVLFK 331


>gi|227114849|ref|ZP_03828505.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 288

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 10/206 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    LP     +   +L   VI  L     + LA  +R    +L  +  +   +P + 
Sbjct: 78  DLASGELPHKMVVSLGTLLKGYVIGSLLALALSALAVSTRFGRDLLGTLTSMFNPLPAIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F           E + +F +  S +W M  + Y     +   L    R++ L
Sbjct: 138 LLPLALLWFGLG--------EKSLVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G++    + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 190 TGFRYINAILIPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRN 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
           E     +   + +++ +  L + L+F
Sbjct: 248 ELYTDRVFAGLASVIIIGLLVEGLVF 273



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G        +    ++ +TG+R+   I++P   P  ++G  
Sbjct: 153 LVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYINAILIPAALPSILSGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFSTIEKVTVKR 283


>gi|166710140|ref|ZP_02241347.1| ABC transporter amino acid permease [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 489

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L ++       +  ++ ++LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGVTPASETDSRVARLLRHTREHLALVGISLGLALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 369 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 422

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  DL  IL   L    V+ L  Q  F  +  W+
Sbjct: 423 VGTATLG-ALIGAGGYGQPILTGIRLDDLGLILEGALP-AAVLALLVQAAFEGLERWA 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG-AKPAIAALFLY---SLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 434

Query: 530 GHI 532
           G  
Sbjct: 435 GGY 437


>gi|253687789|ref|YP_003016979.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754367|gb|ACT12443.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 288

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 10/206 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    LP     +   +L   VI  L     + LA  +R    +L  +  +   +P + 
Sbjct: 78  DLASGELPHKMVVSLGTLLKGYVIGSLLALALSALAVSTRFGRDLLGTLTSMFNPLPAIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F           E + +F +  S +W M  + Y     +   L    R++ L
Sbjct: 138 LLPLALLWFGLG--------EKSLVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGL 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G++    + +P ++P ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 190 TGFRYINAILIPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRN 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF 260
           E     +   + +++ +  L + L+F
Sbjct: 248 ELYTDRVFAGLASVIIIGLLVEGLVF 273



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G        +    ++ +TG+R+   I++P   P  ++G  
Sbjct: 153 LVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYINAILIPAALPSILSGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFSTIEKVTVKR 283


>gi|188574536|ref|YP_001911465.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188518988|gb|ACD56933.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 489

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L +Y       +  ++ ++LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGLTPASETDSRVARLLRYTREHLALVGISLGLALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 369 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 422

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  DL  IL   L    V+ L  Q  F  +  W+
Sbjct: 423 VGTATLG-ALIGAGGYGQPILTGIRLDDLGLILEGALP-AAVLALLVQAAFEGLERWA 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG-AKPAIAALFLY---SLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 434

Query: 530 GHI 532
           G  
Sbjct: 435 GGY 437


>gi|77464521|ref|YP_354025.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77388939|gb|ABA80124.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 254

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLII 395
           V     + +  +  G+     W +                    + +G  T++R V  + 
Sbjct: 9   VPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAFARYWELFLTMGWQTLWRTVAGLG 68

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A I    +G+ +GF       + P      A P     P++       H    + ++ L
Sbjct: 69  LAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQHDFNTVLMAFL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   + + I  +V  G S    +++++  S   +    +  I LP   P +      +  
Sbjct: 129 I---SFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPEFFGALKVSVT 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A+  + + E+ S         GLGA        G +P +   ++ +    + L
Sbjct: 186 LAFIGTNLVEIVSPHGR-----GLGALFKSGETNGDYPLMFAVLIALAFLGILL 234



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 90/261 (34%), Gaps = 18/261 (6%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R+I   +  +L F+ +  GI+        +   P D+                  +T  R
Sbjct: 5   RKIGVPLAAILIFLALWEGIVWWNGWPNYKMASPSDLPPAFARY--WELFLTMGWQTLWR 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++ + ++++F  +   +   SR     L P+L    +IP    +    + F+  +    
Sbjct: 63  TVAGLGLAVIFGTLLGMVMGFSRIARDGLYPLLVGFNAIPKATLVPVLALIFIGQHDFN- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +   F    + +  S+   L  +  +  ++ RS   S    FW + +P ++P 
Sbjct: 122 ------TVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKLTIFWKIALPKTLPE 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + +S++  +      E++          G+G+         D   +   ++ +  +
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIVS-----PHGRGLGALFKSGETNGDYPLMFAVLIALAFL 230

Query: 252 IFLY---DQLLFRPMIVWSNK 269
             L       L R    W+ +
Sbjct: 231 GILLYYAVVALERIFAGWAER 251


>gi|332284071|ref|YP_004415982.1| putative permease of ABC transporter [Pusillimonas sp. T7-7]
 gi|330428024|gb|AEC19358.1| putative permease of ABC transporter [Pusillimonas sp. T7-7]
          Length = 257

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 90/253 (35%), Gaps = 20/253 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWLGCIT--MFRVVVL 393
            +  +     +       AW    +++          ++D+    +   ++  + R+   
Sbjct: 13  KLAMVVAIAAILLFWQIAAWSLPDFLMPGVPSVMVRLWEDIQSADFRAALSGSLVRLGFG 72

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
              A    +  G+  G        ++    +L + P+  + PL +  + +     N+ + 
Sbjct: 73  YGAALAFGVGFGLVGGVLFFFREVLKSAIIILQSIPSIAWVPLFLIMMGFG----NMPII 128

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++     +    +V+    +  N     A     + W   + + LP + P  +TGA  A
Sbjct: 129 VVIALSAFFPAALSVMNATESVLNVHVSAARVMGASRWDMLKRVYLPAVMPELITGAQLA 188

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G AW A I +E+           GLG  +A + E      V+  +L +      +++ +
Sbjct: 189 FGNAWRALISAEMLIGFGQ-----GLGRSLAYAGETADMMGVMANILTIAILATLIDQVI 243

Query: 574 WHPLYLYGTRCLR 586
              L     R LR
Sbjct: 244 ---LENLKRRVLR 253



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 94/251 (37%), Gaps = 14/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A +L   I    L       VP  +V +    +         S + +R+      +L 
Sbjct: 20  IAAILLFWQIAAWSLPDFLMPGVPSVMVRLWE-DIQSADFRAALSGSLVRLGFGYGAALA 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F   +  +         VL   + I+QSIP + ++   ++              +  I  
Sbjct: 79  FGVGFGLVGGVLFFFREVLKSAIIILQSIPSIAWVPLFLIMMG--------FGNMPIIVV 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  S  +    S+  +  ++       +R    S W     + +P  MP L+    ++  
Sbjct: 131 IALSAFFPAALSVMNATESVLNVHVSAARVMGASRWDMLKRVYLPAVMPELITGAQLAFG 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++++EM++         G+G  +A A +  D++ ++  +LT+  +  L DQ++  
Sbjct: 191 NAWRALISAEMLIGFGQ-----GLGRSLAYAGETADMMGVMANILTIAILATLIDQVILE 245

Query: 262 PMIVWSNKFRL 272
            +     +++ 
Sbjct: 246 NLKRRVLRYQY 256


>gi|298241583|ref|ZP_06965390.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297554637|gb|EFH88501.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 291

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 14/230 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           + P +   +A ++   + +   +        P D++D +               T    L
Sbjct: 48  VVPPLILAVALLIGWFVSSAYGYVNTLFLPAPADVLDSLSSGFSSGIYLSNLWVTVQESL 107

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +++L        +  KSR L   + P L   Q+IP++      V++    +   +  
Sbjct: 108 VGFLLALALALPLGYVLTKSRVLAAAIHPYLAAGQAIPVVVIAPLLVLWLGYGWVPNMYV 167

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  +F         M  +    +  I R L + +R    +GW  F ++  P ++P ++
Sbjct: 168 CALVVVF--------PMVVNTMLGVQTIDRALTDAARVEGAAGWAMFAHIEFPLALPSII 219

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +   ++      +  E +  GD      G+GS + +A  + +   +  
Sbjct: 220 AGVRTGLTLSVMGALVGEFVQGGDQ-----GLGSLLLVAKNQYNTPLMFA 264



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 16/246 (6%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                R               V  ++      +   V+    + +  ++       D L 
Sbjct: 28  RRSASRASQAPRRNFTWMLSVVPPLILAVALLIGWFVSSAYGYVNTLFLPAPADVLDSLS 87

Query: 379 VIWLGCI-------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             +   I       T+   +V  ++A  + +P+G  +     +++ I P+     A P  
Sbjct: 88  SGFSSGIYLSNLWVTVQESLVGFLLALALALPLGYVLTKSRVLAAAIHPYLAAGQAIPVV 147

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           V  PL+V  + Y  +      +L+++F     ++ N + G         + A      GW
Sbjct: 148 VIAPLLVLWLGYGWVPNMYVCALVVVF----PMVVNTMLGVQTIDRALTDAARVEGAAGW 203

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             + +I  P   P  + G  T    +   ++V E    G       GLG+ +  +  + +
Sbjct: 204 AMFAHIEFPLALPSIIAGVRTGLTLSVMGALVGEFVQGGDQ-----GLGSLLLVAKNQYN 258

Query: 552 FPEVVL 557
            P +  
Sbjct: 259 TPLMFA 264


>gi|170749183|ref|YP_001755443.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170655705|gb|ACB24760.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 245

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA +L    I  L  G +    P  ++  +    +   L      T LR+  +  ++++ 
Sbjct: 10  LAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVAISFTVAMIL 69

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V      +S+   ++L   L ++ + P L       V+            E AAI A+
Sbjct: 70  GVVLGVALGRSKAADLILDTPLLVLLNTPALVITVLAYVWVGL--------TETAAILAV 121

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +++ N+   + +   N+   L+E++R++RL        + +P   P +V      +S 
Sbjct: 122 VLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWALDILIPQLQPYMVTAARSGLSL 181

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            W  V+  E++          G+G  I    ++  D+ AI+   L  + V+   D LL +
Sbjct: 182 AWKIVLVVELLG------RPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQ 235

Query: 262 PMIVWSNKFR 271
            +  +  ++R
Sbjct: 236 RLEAYVRRWR 245



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 11/242 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W          +    +  +       +   +     +T+ RV +   +A I+ +
Sbjct: 12  VLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVAISFTVAMILGV 71

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G        +     +L   PA V   L    V            L ++     
Sbjct: 72  VLGVALGRSKAADLILDTPLLVLLNTPALVITVLAYVWVGLTET----AAILAVVLNKLP 127

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   V  GA        E+A ++ +    W   I++P + PY VT A +    AW   +
Sbjct: 128 NVAVIVREGARNLDPGLDEMARAYRLDRRSWALDILIPQLQPYMVTAARSGLSLAWKIVL 187

Query: 523 VSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
           V E+           G+G  I     +      ++   L+    ++ ++  L   L  Y 
Sbjct: 188 VVELLGRPD------GVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAYV 241

Query: 582 TR 583
            R
Sbjct: 242 RR 243


>gi|217970220|ref|YP_002355454.1| binding-protein-dependent transporters inner membrane component
           [Thauera sp. MZ1T]
 gi|217507547|gb|ACK54558.1| binding-protein-dependent transport systems inner membrane
           component [Thauera sp. MZ1T]
          Length = 263

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 95/249 (38%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +L       L +G      PR     +   +D  +     + T  R L+   +S++ 
Sbjct: 25  LCLLLAAWEAVSLAYGPLVMPDPRAAFATLWGLIDSGAAWPELAATARRALTGYALSVVA 84

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V   +A  S    M+  P++ ++   P + +L   +++F               +F +
Sbjct: 85  GSVLGLVAGLSMTASMMARPLVTVLMGTPPIAWLVLAMLWFGASDGTP--------VFTV 136

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F +    +     Q    +   L  ++ +FRL        + +P  +  L    + ++  
Sbjct: 137 FVASFPVIFIGALQGTRTLDNQLHGMAAAFRLPRRMMLTDVYLPHVVSYLFPAWIAALGT 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  VV +E++          G+G+ +A++    D  A +  +  ++G++   + L+  P
Sbjct: 197 AWKVVVMAELLA------TQDGVGAALAVSRSHLDTAATMGWIAAVVGLLLAVEYLVLEP 250

Query: 263 MIVWSNKFR 271
           +     ++R
Sbjct: 251 IKREVERWR 259



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 75/264 (28%), Gaps = 10/264 (3%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L       P              +L   W  V       +           +   D    
Sbjct: 4   LRAWLAGLPAYLWSGWGAIASLCLLLAAWEAVSLAYGPLVMPDPRAAFATLWGLIDSGAA 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T  R +    ++ +    +G+  G     S   +P   +L   P   +  L + 
Sbjct: 64  WPELAATARRALTGYALSVVAGSVLGLVAGLSMTASMMARPLVTVLMGTPPIAWLVLAML 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                   P       +   +   I    + G     N    +A++F +        + L
Sbjct: 124 WFGASDGTP----VFTVFVASFPVIFIGALQGTRTLDNQLHGMAAAFRLPRRMMLTDVYL 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P +  Y     I A G AW   +++E+ +         G+GA +A S         +  +
Sbjct: 180 PHVVSYLFPAWIAALGTAWKVVVMAELLA------TQDGVGAALAVSRSHLDTAATMGWI 233

Query: 560 LIMCCFVLALNRFLWHPLYLYGTR 583
             +   +LA+   +  P+     R
Sbjct: 234 AAVVGLLLAVEYLVLEPIKREVER 257


>gi|89099800|ref|ZP_01172673.1| ABC transporter, permease component [Bacillus sp. NRRL B-14911]
 gi|89085547|gb|EAR64675.1| ABC transporter, permease component [Bacillus sp. NRRL B-14911]
          Length = 254

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 15/245 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++ + +     LL   ++      L         P   +    +         + + T L
Sbjct: 4   VAVKGWKPAAVLLLLFILWEAAVRLAEVPAWLLPPPSDIMAESVE-SWARFSGHLASTVL 62

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L+   +  +F    A +  +   +   + P+L + Q++P++      V++F       
Sbjct: 63  LSLAGFALGTVFGLTAAIILHRLPAVRESVYPLLILSQNVPVIVLAPLLVIWFGFGL--- 119

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L     I     + +T +       +P +L+        +  Q FW L  P S+P
Sbjct: 120 -----LPKFIVIILVCFFPITVAALDGFRQVPAELKHYMAMSGATKRQLFWKLEWPGSLP 174

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   + +S +      V SE +          GIG ++ LA        +  A+  ++ 
Sbjct: 175 SLFSGLKISATYSVMGAVISEWLG------SEKGIGVFMTLASSSFRTDRVFVAIFAIMI 228

Query: 251 VIFLY 255
           +  ++
Sbjct: 229 LSLIF 233



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 74/238 (31%), Gaps = 10/238 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++      V  +L I W   V    +          +   + +           T+   +
Sbjct: 6   VKGWKPAAVLLLLFILWEAAVRLAEVPAWLLPPPSDIMAESVESWARFSGHLASTVLLSL 65

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               + ++  +   I +   P +   + P   L    P  V  PL+V    +  L     
Sbjct: 66  AGFALGTVFGLTAAIILHRLPAVRESVYPLLILSQNVPVIVLAPLLVIWFGFGLLPK--- 122

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +++I    + I    + G    P + K   +    T  + +  +  PG  P   +G  
Sbjct: 123 -FIVIILVCFFPITVAALDGFRQVPAELKHYMAMSGATKRQLFWKLEWPGSLPSLFSGLK 181

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +   +   +++SE            G+G ++  ++       V + +  +    L  
Sbjct: 182 ISATYSVMGAVISEWLGSEK------GIGVFMTLASSSFRTDRVFVAIFAIMILSLIF 233


>gi|158321119|ref|YP_001513626.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
 gi|158141318|gb|ABW19630.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
          Length = 274

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 93/249 (37%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+L+  +   L       T+ P DIV ++       SL ++A  +    + ++ +  
Sbjct: 38  LIIFLLLWEVAASLKWIDPFFTSKPSDIVTLIGKLAMDGSLFKHAVVSITETVISLFLGT 97

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   V A +   S     VL P L ++ ++P +      +++      G ++ A   +I 
Sbjct: 98  ILGTVIAIILWWSDFAARVLDPYLVVLNAMPKIALGPIIIIWAGAGMSGIIVTALTISIV 157

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       S Y     +  +  ++  +F  S +Q    +  P S+P ++    +++
Sbjct: 158 V--------TILSTYNGFKEVDTEKIKLLTTFGASKFQTLQKVIFPASIPTMINTFKINI 209

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257
              W  V+  E +V         G+G  I    +   L  ++  ++ +     +  Q   
Sbjct: 210 GMAWVGVIVGEFLVSKS------GLGYLIVYGGQVFRLDIVMAGVIVLSLSTAIMYQFIS 263

Query: 258 LLFRPMIVW 266
            L    + W
Sbjct: 264 FLENRFLKW 272



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++   V+ + + +I+   + I + +    +  + P+  +L A P     P+
Sbjct: 76  GSLFKHAVVSITETVISLFLGTILGTVIAIILWWSDFAARVLDPYLVVLNAMPKIALGPI 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++             + +  +  +    + +   G      +  ++ ++F  + ++  + 
Sbjct: 136 IIIWAGAGMSG----IIVTALTISIVVTILSTYNGFKEVDTEKIKLLTTFGASKFQTLQK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P  +       G AW   IV E        +  +GLG  I    +      V+
Sbjct: 192 VIFPASIPTMINTFKINIGMAWVGVIVGEFL------VSKSGLGYLIVYGGQVFRLDIVM 245

Query: 557 LGVLIMCCFVLALNRFL 573
            GV+++      + +F+
Sbjct: 246 AGVIVLSLSTAIMYQFI 262


>gi|308069377|ref|YP_003870982.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Paenibacillus polymyxa E681]
 gi|305858656|gb|ADM70444.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Paenibacillus polymyxa E681]
          Length = 277

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I   +        L  +   T    ++  ++  L   + A L   S  L  VL P +
Sbjct: 63  PSKIFTQIGKDAVSGELWGHVGVTVGETMAGFLLGTLLGTLLAVLIWWSPFLSRVLDPYM 122

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  S+P +      +V F   +         A +    +  V   T  +Y S   +  +
Sbjct: 123 VVFNSMPKVALGPIFIVMFGAGFT--------AILMTTLSITVIITTLVVYNSFQEVDSN 174

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +V R+F  S    F  + +P S P +V  + +++   W  V+  E +V  +      G
Sbjct: 175 LIKVVRTFGGSRRDTFQKVILPASFPAIVSTLKVNVGMAWVGVIVGEFLVAKN------G 228

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  I    +  +   ++ ++L +  V  L  Q +
Sbjct: 229 LGYLIIYGFQVFNFTLVMSSLLIIAVVATLMYQAV 263



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 85/251 (33%), Gaps = 12/251 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI-GYIVNHFTYQDVLYV 379
             +R    + +L       +  +L + W        I +   S    I        V   
Sbjct: 19  AYLRSRRSQRWLVTGVQTAILLLLFVLWEIAGRLKWIDVLLFSYPSKIFTQIGKDAVSGE 78

Query: 380 IWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +W    +T+   +   ++ +++   + + I + P +S  + P+  +  + P     P+ +
Sbjct: 79  LWGHVGVTVGETMAGFLLGTLLGTLLAVLIWWSPFLSRVLDPYMVVFNSMPKVALGPIFI 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +    + +  T       V        ++  +V  +F  +    ++ +I
Sbjct: 139 VMFGAGFTAILMTTLSITVIIT----TLVVYNSFQEVDSNLIKVVRTFGGSRRDTFQKVI 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP  FP  V+      G AW   IV E        +   GLG  I    +  +F  V+  
Sbjct: 195 LPASFPAIVSTLKVNVGMAWVGVIVGEFL------VAKNGLGYLIIYGFQVFNFTLVMSS 248

Query: 559 VLIMCCFVLAL 569
           +LI+      +
Sbjct: 249 LLIIAVVATLM 259


>gi|270261509|ref|ZP_06189782.1| transporter [Serratia odorifera 4Rx13]
 gi|270044993|gb|EFA18084.1| transporter [Serratia odorifera 4Rx13]
          Length = 212

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 13/176 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
               +  +P    +   P   F PL +          ++   L++  GT +  +  VI  
Sbjct: 46  RFFKAVTEPLVDFVRYMPVVAFVPLTILWTG----TDDVQKFLIIWIGTFFQQVLMVIDT 101

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P DF  +  +  +        I+LP   P        + G AW   +++E+ +   
Sbjct: 102 VKRVPGDFVGLGRTLGMPDRNILFKIVLPSTLPGIWDALRISLGWAWTWLVLAELVA--- 158

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584
               T+GLG  I  S        ++  +L++    L  ++ +      L+ Y  R 
Sbjct: 159 ---STSGLGYRIVVSQRFFQTDTIIGYILLLGLLGLITDQLMRAAERVLFRYNARR 211



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 72/166 (43%), Gaps = 14/166 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    V  P++D ++ +P++ F+  T+++            ++     I+    +     
Sbjct: 46  RFFKAVTEPLVDFVRYMPVVAFVPLTILWTGTD--------DVQKFLIIWIGTFFQQVLM 97

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +  ++  +P D   + R+  +      + + +P ++PG+   + +S+   W ++V +E++
Sbjct: 98  VIDTVKRVPGDFVGLGRTLGMPDRNILFKIVLPSTLPGIWDALRISLGWAWTWLVLAELV 157

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I ++ +      I+  +L +  +  + DQL+
Sbjct: 158 A------STSGLGYRIVVSQRFFQTDTIIGYILLLGLLGLITDQLM 197


>gi|168574951|ref|ZP_02720914.1| choline transporter [Streptococcus pneumoniae MLV-016]
 gi|183578802|gb|EDT99330.1| choline transporter [Streptococcus pneumoniae MLV-016]
          Length = 506

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|118470106|ref|YP_886800.1| transporter permease 1 [Mycobacterium smegmatis str. MC2 155]
 gi|118171393|gb|ABK72289.1| transporter permease 1 [Mycobacterium smegmatis str. MC2 155]
          Length = 282

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 89/284 (31%), Gaps = 19/284 (6%)

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI--FWF 349
           T+ +    + +     P +    +  R LG          L L     ++ +      W 
Sbjct: 3   TSIVAQQDHPTAEAMEPATGEPPRRKRKLGNFAISGISTVLLLAVLLALAEIGARAGLWT 62

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
             V      I  + +        + D          T   V   I+  SI+    G+   
Sbjct: 63  TQVLPAPSVITAELLTIFGEPQFWGDAGR-------TGVEVACAIVFGSILGFVAGLIFW 115

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P +    +P+     A P  +F+P+++  V    ++    + +L        +  N  
Sbjct: 116 KVPTVGRIFEPYLVSFYAVPLVLFYPVMIVLVGINAMS----VIILATVMAAIPMALNTA 171

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G ++ P  + ++A S   +  +    I +P   PY V G   A   A   +I  E    
Sbjct: 172 VGLNSMPAVYLKLARSLKASPKQTLFAIAIPAAGPYIVAGLRLAVVYALIGTIAMEF--- 228

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   GLG  I    E     ++   + ++      L   L
Sbjct: 229 ---TTAQAGLGYRIRYLYEIFDNNQMFAYIAVVLILSCLLTVLL 269



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 84/237 (35%), Gaps = 17/237 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L   Q    P  I   +            A RT + +  A+V   +  FV   +  K   
Sbjct: 60  LWTTQVLPAPSVITAELLTIFGEPQFWGDAGRTGVEVACAIVFGSILGFVAGLIFWKVPT 119

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +G +  P L    ++P++ F    +V              ++ I          M  +  
Sbjct: 120 VGRIFEPYLVSFYAVPLVLFYPVMIVLVGIN--------AMSVIILATVMAAIPMALNTA 171

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L ++P    +++RS + S  Q  + + +P + P +V  + +++       +A E    
Sbjct: 172 VGLNSMPAVYLKLARSLKASPKQTLFAIAIPAAGPYIVAGLRLAVVYALIGTIAME---- 227

Query: 216 GDTVIPLPGIGS---YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
                   G+G    Y+        + A +  +L +  ++ +   L+ R ++   N+
Sbjct: 228 --FTTAQAGLGYRIRYLYEIFDNNQMFAYIAVVLILSCLLTVLLALVERILLKGRNR 282


>gi|187478403|ref|YP_786427.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422989|emb|CAJ49519.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 269

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 10/248 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              +       +  +  ++   W   V  + +          +     +    ++    +
Sbjct: 19  RLSQALRAATPSIMLVVLILAVWEVCVWVLDVSAFVLPAPSSIFAVLLERQAELLQASLV 78

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   ++   + + I+ I V + +           P   L    P     PL++    Y  
Sbjct: 79  TGAEILYGFVYSCIVGIAVALLVDRFAWFGRASYPLIVLFQNVPKIALAPLLILWFGY-- 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L    L++    + +  N++ G  A   +   +  S   T  +    + +P   P 
Sbjct: 137 --DLLPKVALIVIMAFFPVTLNMLVGLRAADANLVSLLQSIGATPNQVLARVKIPASLPA 194

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A   +   +IV E          + GLG  I  ++ +     V   ++ +   
Sbjct: 195 LMAGMKVAITLSVIGAIVGEFVG------ASAGLGYMIQFASSQMDTALVFAALVQVSVL 248

Query: 566 VLALNRFL 573
            +     +
Sbjct: 249 GVVFYYII 256



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 18/258 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   P+I  ++  + V  +   +L            +  V +      L Q +  T   +
Sbjct: 25  RAATPSIMLVVLILAVWEVCVWVLDVSAFVLPAPSSIFAVLLE-RQAELLQASLVTGAEI 83

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   V S +     A L  +    G    P++ + Q++P +      +++F         
Sbjct: 84  LYGFVYSCIVGIAVALLVDRFAWFGRASYPLIVLFQNVPKIALAPLLILWFGYDL----- 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L  +  I     + +T +M   L     +L  + +S   +  Q    + +P S+P L
Sbjct: 139 ---LPKVALIVIMAFFPVTLNMLVGLRAADANLVSLLQSIGATPNQVLARVKIPASLPAL 195

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TML 249
           +  M ++++      +  E +          G+G  I  A  + D   +  A++    + 
Sbjct: 196 MAGMKVAITLSVIGAIVGEFVGASA------GLGYMIQFASSQMDTALVFAALVQVSVLG 249

Query: 250 GVIFLYDQLLFRPMIVWS 267
            V +   +LL    + W+
Sbjct: 250 VVFYYIIELLEARFLAWA 267


>gi|199599186|ref|ZP_03212589.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus rhamnosus HN001]
 gi|229551031|ref|ZP_04439756.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|258507070|ref|YP_003169821.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|258538258|ref|YP_003172757.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|199589939|gb|EDY98042.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus rhamnosus HN001]
 gi|229315626|gb|EEN81599.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|257146997|emb|CAR85970.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|257149934|emb|CAR88906.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|259648440|dbj|BAI40602.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           component [Lactobacillus rhamnosus GG]
          Length = 220

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 19/202 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L  +  ++I+ +         A+ R L   ++ I +++Q+IP L  L+  ++    
Sbjct: 26  ARHFLISIYGVLIAAVIGIPVGLAIARHRTLSNTVIGIANVIQTIPSLAMLSIIMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+ ++L + ++   ++ WQ  + + +
Sbjct: 86  GV--------NTVIVTVFLYSLLPIIKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P SM  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 138 PLSMSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIVRGTNATNGGAIILAG 190

Query: 246 ----LTMLGVIFLYDQLLFRPM 263
                 M  +  L    L R +
Sbjct: 191 ALPTALMAIISDLALGFLERRL 212



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 19/222 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ   Y + +     +        I+++     ++IA++I IPVG+ I     +S+ + 
Sbjct: 6   TWQQFWYYLANNGSYVLSQFARHFLISIY----GVLIAAVIGIPVGLAIARHRTLSNTVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +   +   I+ N   G      + 
Sbjct: 62  GIANVIQTIPSLAMLSIIMLGLGLGVNT----VIVTVFLYSLLPIIKNTYTGMQNVDKNL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A    +T W+    + +P      + G   A   A   + +      G       GL
Sbjct: 118 MDAAKGMGMTRWQSLYMVEIPLSMSVIMAGIRNALVVAIGITAIGAFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
           G  I   T   +   ++L       +M         FL   L
Sbjct: 171 GDIIVRGTNATNGGAIILAGALPTALMAIISDLALGFLERRL 212


>gi|91780826|ref|YP_556033.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693486|gb|ABE36683.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 298

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 98/257 (38%), Gaps = 14/257 (5%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  R LGV R   P+  + L +       L + W  VV    +          +      
Sbjct: 30  RAPRVLGVPRALLPKIGVPLVT----GIALLVLWEAVVRAAGVPSFILPAPSDIFGALID 85

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +         IT+   +  + +A ++ + + I       +     P+A +L   P     
Sbjct: 86  NWASFAGALWITLSISLAALSLAIVVGLLLAILFTQSKWMELAFFPYAVVLQVTPVVSIA 145

Query: 435 PLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           PL++          N+ +SLL+       + IL N   G ++  ++  ++   +  + W+
Sbjct: 146 PLIIIWA------NNVVVSLLVCAWLVAFFPILSNTTLGLNSADHNLADLFQLYKASRWQ 199

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ LP   PY++ G   + G +   ++V+E  +        +GL + I ES  +   
Sbjct: 200 TLRYLRLPSAAPYFLAGVRISGGLSLIGAVVAEFVAG--TGGTKSGLASRILESGYQLQI 257

Query: 553 PEVVLGVLIMCCFVLAL 569
           P +   + ++    + +
Sbjct: 258 PRMFAALFLVSMCGVVI 274



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 95/249 (38%), Gaps = 14/249 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             + +   P +  +   VL   ++            P DI   +    +  S       T
Sbjct: 40  ALLPKIGVPLVTGIALLVLWEAVVRAAGVPSFILPAPSDIFGALID--NWASFAGALWIT 97

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               L+A+ ++++   + A L  +S+ + +   P   ++Q  P++      +++  N+  
Sbjct: 98  LSISLAALSLAIVVGLLLAILFTQSKWMELAFFPYAVVLQVTPVVSIAPLIIIWANNVVV 157

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             ++ A L A F I +        +    L +   +L ++ + ++ S WQ   YL +P +
Sbjct: 158 SLLVCAWLVAFFPILS--------NTTLGLNSADHNLADLFQLYKASRWQTLRYLRLPSA 209

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--ML 246
            P  +  + +S        V +E +          G+ S I  +  +  +  +  A  ++
Sbjct: 210 APYFLAGVRISGGLSLIGAVVAEFVAGTGGTKS--GLASRILESGYQLQIPRMFAALFLV 267

Query: 247 TMLGVIFLY 255
           +M GV+   
Sbjct: 268 SMCGVVIFV 276


>gi|229828063|ref|ZP_04454132.1| hypothetical protein GCWU000342_00112 [Shuttleworthia satelles DSM
           14600]
 gi|229792657|gb|EEP28771.1| hypothetical protein GCWU000342_00112 [Shuttleworthia satelles DSM
           14600]
          Length = 462

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 97/244 (39%), Gaps = 18/244 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  ++L+    ++++H       P      +          +    + LR+   + +  L
Sbjct: 13  IFIWLLLWQAASLMIHNEILLVGPLSAGRELLRLSANPIFTKSVLFSLLRIAGGIFLGSL 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                +  + +S  +   L P + +++++P+  F+   +++F         G++  A+  
Sbjct: 73  LGLSASFASWRSHLVRDFLSPFVTMIKAVPVAAFVILLLIWF---------GSDNIALVI 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  +  Q+L  +   ++E++ +FRL  + +  Y+ +P S+P L+    +++ 
Sbjct: 124 SLLVTFPILYINSLQALDALDPQMQEMAAAFRLPRFSRLRYILLPESLPALLSAFSLAIG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G    VA+E+I  G T   L         A+    +      +L    VI L   LL +
Sbjct: 184 MGIKSGVAAEVI--GQTSFSLG-------NALYRSKIYLETGQLLAWTAVIILLSWLLEK 234

Query: 262 PMIV 265
             I 
Sbjct: 235 GWIA 238



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   I + S++ +           +   + PF  ++ A P   F  L++     
Sbjct: 57  LFSLLRIAGGIFLGSLLGLSASFASWRSHLVRDFLSPFVTMIKAVPVAAFVILLLIWFG- 115

Query: 444 YHLNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                +  ++L++     + IL  N +    A     +E+A++F +  +   RYI+LP  
Sbjct: 116 -----SDNIALVISLLVTFPILYINSLQALDALDPQMQEMAAAFRLPRFSRLRYILLPES 170

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++    A G    + + +EV         +  LG  +  S       +++    ++
Sbjct: 171 LPALLSAFSLAIGMGIKSGVAAEVIG-----QTSFSLGNALYRSKIYLETGQLLAWTAVI 225

Query: 563 CCFVLALNR 571
                 L +
Sbjct: 226 ILLSWLLEK 234


>gi|154687191|ref|YP_001422352.1| YtlD [Bacillus amyloliquefaciens FZB42]
 gi|154353042|gb|ABS75121.1| YtlD [Bacillus amyloliquefaciens FZB42]
          Length = 270

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 70/189 (37%), Gaps = 16/189 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   V+  +  +++   +   + +   ++  + P+  +L A P     P+++  +  
Sbjct: 79  GVTLGETVLGFLFGTLLGTCLAALLWWSNRLARVLDPYLVILNAMPKVALGPILIVALGP 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILP 500
              +       ++  G    ++   I           ++ +V  +F       ++ +ILP
Sbjct: 139 NFTS-------IVAMGAVISVIITTIVVFTAFQEVDENYIKVMKTFGAKRSIMFKEVILP 191

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  ++      G +W   IV E        +   GLG  I    +  +F  V L +L
Sbjct: 192 ACAPAIISALKVNVGLSWVGVIVGEFL------VSEKGLGYMIIYGFQVFNFTLVFLSLL 245

Query: 561 IMCCFVLAL 569
           I+  F   +
Sbjct: 246 IIAIFATLM 254



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   +   SL  +   T    +   +   L     A L   S RL  VL P
Sbjct: 56  SSPSAVCRLLVEKIADGSLAAHIGVTLGETVLGFLFGTLLGTCLAALLWWSNRLARVLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   V    + ++           T  ++ +   + 
Sbjct: 116 YLVILNAMPKVALGPILIVALGPNFTSIVAMGAVISVII--------TTIVVFTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F       F  + +P   P ++  + +++   W  V+  E +V        
Sbjct: 168 ENYIKVMKTFGAKRSIMFKEVILPACAPAIISALKVNVGLSWVGVIVGEFLV------SE 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++L +     L  Q
Sbjct: 222 KGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLMYQ 256


>gi|86750206|ref|YP_486702.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86573234|gb|ABD07791.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 259

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 68/241 (28%), Gaps = 10/241 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                  +   V  +L   W   V    I         IV      + ++       T++
Sbjct: 5   RRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSLYTLY 64

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                 +IA I  +   I I     I            + P     PL V  +       
Sbjct: 65  VTTAGFLIALIGGVLAAIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTGGAPK 124

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
               +++ IF     I+ N   G  A  +D  ++A S   +       +  P   P    
Sbjct: 125 IAIAAIIAIF----PIVINTTVGLRAIDHDMIDLARSARASRLDIMMKVRFPNALPSLFA 180

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           GA      A   +IV E  +         GLG  I  S    +       ++++      
Sbjct: 181 GAKIGVSFALIGAIVGEFVAGEQ------GLGYVILTSQATFNSTRAFAAIVVLGILGTI 234

Query: 569 L 569
           +
Sbjct: 235 M 235



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 94/267 (35%), Gaps = 19/267 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           RR  P    ++   ++  I  +++ L GI+   +P   + I  I  +     + +  T  
Sbjct: 5   RRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSLYTLY 64

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              +  +I+L+   + A     S  +      +L    SIP +      V++       K
Sbjct: 65  VTTAGFLIALIGGVLAAIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTGGAPK 124

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  A + AIF         +  +    L  I  D+ +++RS R S       +  P ++P
Sbjct: 125 IAIAAIIAIF--------PIVINTTVGLRAIDHDMIDLARSARASRLDIMMKVRFPNALP 176

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L     + +S      +  E +          G+G  I  +    +      A++ +  
Sbjct: 177 SLFAGAKIGVSFALIGAIVGEFVAG------EQGLGYVILTSQATFNSTRAFAAIVVLGI 230

Query: 251 VIFLYDQL---LFRPMIVWSNKFRLER 274
           +  +       + R M+ W    R + 
Sbjct: 231 LGTIMFFAIEWIERWMLPWHVSQRAKT 257


>gi|321312598|ref|YP_004204885.1| putative permease [Bacillus subtilis BSn5]
 gi|320018872|gb|ADV93858.1| putative permease of ABC transporter [Bacillus subtilis BSn5]
          Length = 270

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   L   SL  +   T    +   ++        A L   S RL  +L P
Sbjct: 56  SSPSAVWRLLLEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLAALLWWSNRLARILDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVILNAMPKVALGPILIVALGPSFISIIAMGAIISVIITTIV--------VYTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F    W  F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ENYTKVMKTFGAKKWVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++L +     L  Q
Sbjct: 222 VGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLMYQ 256



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   +    W+ +              ++    +T+F  V+  ++ + +   +   
Sbjct: 49  WIDPLIFSSPSAVWRLL------LEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLAAL 102

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           + +   ++  + P+  +L A P     P+++  +    ++    +  +    +       
Sbjct: 103 LWWSNRLARILDPYLVILNAMPKVALGPILIVALGPSFIS----IIAMGAIISVIITTIV 158

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V         ++ +V  +F    W  ++ +ILP   P  ++      G +W   IV E  
Sbjct: 159 VYTAFQEVDENYTKVMKTFGAKKWVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFL 218

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 +   GLG  I    +  +F  V L +LI+  F   +
Sbjct: 219 ------VSKVGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLM 254


>gi|58584134|ref|YP_203150.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428728|gb|AAW77765.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 490

 Score = 84.2 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 19/238 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L +Y       +  ++ ++LL       L
Sbjct: 258 QVKLERQSEAAVAAHWLGLTPASETDSRVARLLRYTREHLALVGISLGLALLLALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +  +       V+ 
Sbjct: 370 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA------AVIN 423

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
                +G  +I   G G  I   I+  DL  IL   L    V+ L  Q  F  +  W+
Sbjct: 424 VGTATLG-ALIGAGGYGQPILTGIRLDDLGLILEGALP-AAVLALLVQAAFEGLERWA 479



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 320 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG-AKPAIAALFLY---SLLPIVRNTH 375

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 376 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGA 435

Query: 530 GHI 532
           G  
Sbjct: 436 GGY 438


>gi|209964747|ref|YP_002297662.1| binding-protein-dependent transport systems inner membrane
           component, putative [Rhodospirillum centenum SW]
 gi|209958213|gb|ACI98849.1| binding-protein-dependent transport systems inner membrane
           component, putative [Rhodospirillum centenum SW]
          Length = 263

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 92/227 (40%), Gaps = 5/227 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++   W   V   A+ +       ++      D   ++    +T+   V   ++A +  +
Sbjct: 16  VVLAVWEGAVRVAAVPVFVLPPPSLILQSLVADAGILLPSLRVTVLITVQAFVLAVVSGV 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + +       +++ + P+A +L   P     PLVV  V Y  ++  L L +L      +
Sbjct: 76  ALAVLFSRSRLLAAALYPYAVILQVTPVVAIAPLVVIWVGYERID--LALLILAWIVAFF 133

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N   G S+   + +++      + W+    + +P   PY + G   + G A   ++
Sbjct: 134 PILSNATLGLSSVDPNLRDLFRLHGASRWQTLWRLQIPSALPYILAGMKVSGGLALIGAV 193

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           V+E  +        +GL   I ES  + + P +   +L++    +A+
Sbjct: 194 VAEFVAGSGT---ASGLAWRIVESGNRLAIPRLFAALLLLSLLGIAI 237



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 6/178 (3%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P   + +  +  D   L      T L  + A V++++     A L ++SR L   L P  
Sbjct: 36  PPPSLILQSLVADAGILLPSLRVTVLITVQAFVLAVVSGVALAVLFSRSRLLAAALYPYA 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I+Q  P++      V++            +LA +   +    + +  +    L ++  +
Sbjct: 96  VILQVTPVVAIAPLVVIWVGYER------IDLALLILAWIVAFFPILSNATLGLSSVDPN 149

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           L ++ R    S WQ  W L +P ++P ++  M +S        V +E +    T   L
Sbjct: 150 LRDLFRLHGASRWQTLWRLQIPSALPYILAGMKVSGGLALIGAVVAEFVAGSGTASGL 207


>gi|163749546|ref|ZP_02156793.1| ABC transporter permease protein [Shewanella benthica KT99]
 gi|161330656|gb|EDQ01593.1| ABC transporter permease protein [Shewanella benthica KT99]
          Length = 265

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 19/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   ++ IL         P D+ D +    DV  L ++   T   ++  +++ L 
Sbjct: 32  LVIIGLRQAVVVILAMPSFILPAPLDVFDRLIQRHDV--LLKHTLVTAQEIVLGLLLGLA 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A     S  +   L+PIL   Q++P+       +++       K++   L   F 
Sbjct: 90  MGLFFALQMLLSNPIKRWLLPILIASQAVPVFAIAPVLMLWLGYGMASKIVMTALIIFFP 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + T          Y  L N P    +++++   + WQ   ++  P S+P L   + +++ 
Sbjct: 150 VTTCC--------YDGLRNTPTGYLDLAQTMGATRWQMLRHIQFPASLPTLASGIRVAV- 200

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
                V+A    V G+ V    G+G  +  A     +  +  A+L +  +      +   
Sbjct: 201 -----VIAPIGAVAGEWVGSSEGLGYLMLQANARMLIDEMFAALLILSALSVSLYFVTDK 255

Query: 259 LFRPMIVW 266
           L + +I W
Sbjct: 256 LLKKLIPW 263



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 79/221 (35%), Gaps = 12/221 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V+  +   I    +          DVL  +    +T   +V+ +++   + +   + +
Sbjct: 41  VVVILAMPSFILPAPLDVFDRLIQRHDVL--LKHTLVTAQEIVLGLLLGLAMGLFFALQM 98

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                I   + P      A P     P+++  + Y   +  +  +L++ F     +    
Sbjct: 99  LLSNPIKRWLLPILIASQAVPVFAIAPVLMLWLGYGMASKIVMTALIIFF----PVTTCC 154

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G    P  + ++A +   T W+  R+I  P   P   +G   A   A   ++  E   
Sbjct: 155 YDGLRNTPTGYLDLAQTMGATRWQMLRHIQFPASLPTLASGIRVAVVIAPIGAVAGEWVG 214

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  + ++  +    E+   +LI+    ++L
Sbjct: 215 ------SSEGLGYLMLQANARMLIDEMFAALLILSALSVSL 249


>gi|160902586|ref|YP_001568167.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160360230|gb|ABX31844.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 218

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 75/190 (39%), Gaps = 8/190 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  + + +  +  I +P GI+I   P  ++ +   A +L   P+   F ++V  +S +  
Sbjct: 22  LKIIGLSLPFSIGIGVPTGIFISRHPKAANIVIYIASILMTIPSLALFGIMVVILSPFGA 81

Query: 447 NPNL-WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +    + +I  +   I+ N +    A      E A    +T  +    I LP   P 
Sbjct: 82  GLGVTPAVIALIIYSLLPIIRNTLTAIQALDPQMIEAAKGMGMTESQILFKIRLPLSIPT 141

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G         NA ++    +     + + GLG +I     +  +P V+ GV+++   
Sbjct: 142 IMSGVR-------NAVVMGVGVATLGYFVASGGLGYFIFAGLSRSRYPMVITGVILVSIL 194

Query: 566 VLALNRFLWH 575
            +  N  L  
Sbjct: 195 GVLANYLLLK 204



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++  S+          ++  +   +++ I  I+ +IP L      VV       G  + 
Sbjct: 27  LSLPFSIGIGVPTGIFISRHPKAANIVIYIASILMTIPSLALFGIMVVILSPFGAGLGV- 85

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A+ A+    +  +  +   ++  +   + E ++   ++  Q  + + +P S+P ++
Sbjct: 86  --TPAVIALIIYSLLPIIRNTLTAIQALDPQMIEAAKGMGMTESQILFKIRLPLSIPTIM 143

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +          VV    +      +   G+G +I   +       ++  ++ +  +  
Sbjct: 144 SGVR-------NAVVMGVGVATLGYFVASGGLGYFIFAGLSRSRYPMVITGVILVSILGV 196

Query: 254 LYDQLLFR 261
           L + LL +
Sbjct: 197 LANYLLLK 204


>gi|317402577|gb|EFV83139.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 278

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 88/229 (38%), Gaps = 15/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +           +L ++ + T    L    +S++   + A     S  L  VL 
Sbjct: 64  TSYPSALWPTFLELWSQGNLARHIATTLSATLVGFTLSMVIGIIVAAALWWSDFLYKVLD 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P + F+    ++  + Y    +   +A    I           +Y     I
Sbjct: 124 PFLVVANAMPKIAFVPIFYLWLGSDYAVYGMAVAIAVFVTIMV---------VYAGFRAI 174

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +++R+F  S WQ    + +P S+P L+  + M++      V+      VG+    
Sbjct: 175 DLNKVKLARTFGASRWQVLTKVVLPGSVPTLIAAVKMNIGLALVGVI------VGEFQSA 228

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  I    +   L  ++ A+  +  +  +   +++R     + ++
Sbjct: 229 DSGLGFLIMNGSQVFKLNIVMTAIAMLALISSVMYLVVYRIEAAVARRY 277



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 11/205 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+   +V   ++ +I I V   + +   +   + PF  +  A P   F P+  
Sbjct: 83  LARHIATTLSATLVGFTLSMVIGIIVAAALWWSDFLYKVLDPFLVVANAMPKIAFVPIFY 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   +    + +++ +        +  V AG  A   +  ++A +F  + W+    ++
Sbjct: 143 LWLGSDYAVYGMAVAIAVFV-----TIMVVYAGFRAIDLNKVKLARTFGASRWQVLTKVV 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LPG  P  +       G A    IV E  S        +GLG  I   ++      V+  
Sbjct: 198 LPGSVPTLIAAVKMNIGLALVGVIVGEFQS------ADSGLGFLIMNGSQVFKLNIVMTA 251

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
           + ++      +   ++        R
Sbjct: 252 IAMLALISSVMYLVVYRIEAAVARR 276


>gi|190894445|ref|YP_001984738.1| putative ABC transporter permease [Rhizobium etli CIAT 652]
 gi|218510519|ref|ZP_03508397.1| putative ABC transporter, permease protein [Rhizobium etli Brasil
           5]
 gi|190700106|gb|ACE94188.1| putative ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 272

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + I++ I + +G+ IG  P++ + + PF  +++  P     P++   +  
Sbjct: 76  GASLIRLLSGLGISTAIALLIGMLIGMLPYLRALLAPFIAVISMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G    ++ ++   A   P +    A +   + W+    I+LP I 
Sbjct: 136 GETSK----IALIFIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRIVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G AW   I +E  S        +GLG  I       S   +   V+ + 
Sbjct: 192 PRLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDIIFPYVIWIT 245

Query: 564 CFVLALNRFL 573
              + +N  L
Sbjct: 246 LLAVVMNALL 255



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+LS + IS     +   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDTGASLIRLLSGLGISTAIALLIGMLIGMLPYLRALLAPFIAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  IF      M   +      +PR+    + +   S WQ  
Sbjct: 131 IVMGLG--------ETSKIALIFIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRIVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           I   ++ +  +  + + LL R
Sbjct: 237 IFPYVIWITLLAVVMNALLDR 257


>gi|330808052|ref|YP_004352514.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376160|gb|AEA67510.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 271

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q  + +  R+   + IS L        A      G  L P+L ++  +P L  L    
Sbjct: 71  LWQDTASSLSRLAIGLGISALAGLCLGIAAGTLPLFGAPLSPLLTVVSMVPPLAILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q    IP +L   +++   S W   
Sbjct: 131 IVFGLG--------ELSKVMLIVIGITPCLARDLEQRAREIPPELLIKAQTLGASTWTLL 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ + +   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRVVLPQLLPRLLISLRLMLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  ++ +  + +L D  L R
Sbjct: 237 ILPYVVWITLLAWLMDWGLKR 257



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I+++  + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  ASSLSRLAIGLGISALAGLCLGIAAGTLPLFGAPLSPLLTVVSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPCLARDLEQRAREIPPELLIKAQTLGASTWTLLLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLLISLRLMLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|226304314|ref|YP_002764272.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226183429|dbj|BAH31533.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 285

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 85/252 (33%), Gaps = 16/252 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--- 385
           +   +    Q  S +  +  F ++  VA G    +          +++   I  G +   
Sbjct: 29  KKRQRKSWIQTSSRLGAVVVFLILWSVAAGTLVDTFYLPEPTAVAEEIWDWILDGSLWTN 88

Query: 386 ---TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              TM       +I  I  + +G        +S  ++PF       P     PL++  + 
Sbjct: 89  IMATMVPAAQGFLIGGISALVLGYLFAMSKTVSMVLEPFVAAAYGIPVVALVPLLILWLG 148

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                     ++++ F     I +NV  G      +F +       + W     + LP  
Sbjct: 149 IGRSLAVGVSAIVVFF----LIFYNVYFGIKDVKQEFIDQVRIAGASQWDLVMRVRLPSA 204

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             + V     A   A    +V+E  +       + GLG  ++ +  + +       V+++
Sbjct: 205 LVWVVASLKLAVPHALVGVVVAEFLTG------SEGLGFMLSSNAAQFNAAGTFASVVVL 258

Query: 563 CCFVLALNRFLW 574
                AL+R ++
Sbjct: 259 AAISFALDRIVF 270



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 97/250 (38%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F+++  +    L        P  + + +   +   SL      T +      +I  +
Sbjct: 46  VVVFLILWSVAAGTLVDTFYLPEPTAVAEEIWDWILDGSLWTNIMATMVPAAQGFLIGGI 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   L A S+ + MVL P +     IP++  +   +++        V  + +   F 
Sbjct: 106 SALVLGYLFAMSKTVSMVLEPFVAAAYGIPVVALVPLLILWLGIGRSLAVGVSAIVVFFL 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF         ++Y  + ++ ++  +  R    S W     + +P ++  +V ++ +++ 
Sbjct: 166 IFY--------NVYFGIKDVKQEFIDQVRIAGASQWDLVMRVRLPSALVWVVASLKLAVP 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
                VV +E +   +      G+G  ++    + +      +++ +  + F  D+++F 
Sbjct: 218 HALVGVVVAEFLTGSE------GLGFMLSSNAAQFNAAGTFASVVVLAAISFALDRIVFM 271

Query: 261 --RPMIVWSN 268
             R  ++W  
Sbjct: 272 ISRRALMWKE 281


>gi|260469843|ref|ZP_05813994.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259028385|gb|EEW29710.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 284

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 14/204 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T + +LS   I      V A +  +      ++ P + ++ + P+L  +   ++ F
Sbjct: 91  HLGYTLVELLSGFAIGAAVGLVLAAVITQFPFAEKIVAPYILLLVTTPMLALVPLLILRF 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              Y  ++I   LAA   +          +       +      ++RS+  S  Q FW +
Sbjct: 151 GFGYTPRIIAVALAAGPMVM--------INAATGFRRVDSAKIALARSYGASTLQIFWKI 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P ++  +M+    G    V +EM+  G       G+G+ +        +     
Sbjct: 203 RAPMALPMILVGLMIGAIFGLLTAVGAEMVGGG------FGLGNRLTTYSSMIQMPQFFA 256

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS 267
            +L +  +  L   L F     W+
Sbjct: 257 VVLILSTLGILIYVLFFLIGKKWA 280



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 10/207 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +  + +   +      T+  ++    I + + + +   I   P     + P+  LL  
Sbjct: 77  IAYALFDEFPLIAPHLGYTLVELLSGFAIGAAVGLVLAAVITQFPFAEKIVAPYILLLVT 136

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++    + +        + +       ++ N   G     +    +A S+ 
Sbjct: 137 TPMLALVPLLILRFGFGYT----PRIIAVALAAGPMVMINAATGFRRVDSAKIALARSYG 192

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  + +  I  P   P  + G +         ++ +E+   G       GLG  +   +
Sbjct: 193 ASTLQIFWKIRAPMALPMILVGLMIGAIFGLLTAVGAEMVGGG------FGLGNRLTTYS 246

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLW 574
                P+    VLI+    + +    +
Sbjct: 247 SMIQMPQFFAVVLILSTLGILIYVLFF 273


>gi|269123352|ref|YP_003305929.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptobacillus moniliformis DSM 12112]
 gi|268314678|gb|ACZ01052.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Streptobacillus moniliformis DSM 12112]
          Length = 503

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 21/179 (11%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                     ++    L+ +  I Q+IP L  L   + +             L A+  + 
Sbjct: 37  VPLGIFVINYKKTKEWLLQVTGIFQTIPSLALLGLFIPFIGIG--------TLPAVVTLV 88

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  S    L  I   LEE + +F ++ W+K     +  SM  L+  +       
Sbjct: 89  IYAIFPIMQSTITGLSEIDSSLEEAATAFGMTKWEKLKKYQLALSMGILMSGVR------ 142

Query: 204 WFFVVASEMIVVGDTV---IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                AS MI+   T+   +   G+GS+I L I   +   I    ++   +  ++  L+
Sbjct: 143 ----TASIMIIGTATLAALVGAGGLGSFILLGIDRNNTELIFIGAISSAILAIIFGGLI 197



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 11/172 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI++         +     +    P+     L +  +    L   + L +  IF   
Sbjct: 37  VPLGIFVINYKKTKEWLLQVTGIFQTIPSLALLGLFIPFIGIGTLPAVVTLVIYAIF--- 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ + I G S   +  +E A++F +T W   +   L       ++G  TA       +
Sbjct: 94  -PIMQSTITGLSEIDSSLEEAATAFGMTKWEKLKKYQLALSMGILMSGVRTASIMIIGTA 152

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +   G       GLG++I    ++ +   + +G +      +     +
Sbjct: 153 TLAALVGAG-------GLGSFILLGIDRNNTELIFIGAISSAILAIIFGGLI 197


>gi|149002157|ref|ZP_01827111.1| choline transporter [Streptococcus pneumoniae SP14-BS69]
 gi|237649640|ref|ZP_04523892.1| choline transporter [Streptococcus pneumoniae CCRI 1974]
 gi|237822107|ref|ZP_04597952.1| choline transporter [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759966|gb|EDK66956.1| choline transporter [Streptococcus pneumoniae SP14-BS69]
          Length = 506

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|34541065|ref|NP_905544.1| ABC transporter permease [Porphyromonas gingivalis W83]
 gi|34397380|gb|AAQ66443.1| ABC transporter, permease protein [Porphyromonas gingivalis W83]
          Length = 249

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 75/186 (40%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ I IA ++   V + +    +    +  F       P     P+++     
Sbjct: 57  LASLLRIVIGISIALVLGFIVALSMFRYKNFGRVMDSFVYFCYPIPKLALLPIIMLLAGL 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   + + L++IF        N+         +   V +S   T  +  R+++LP I 
Sbjct: 117 GDVTKIIMIVLIIIFQII----VNLRDSLRNISKESFLVLTSLGATHAQLMRHLVLPAIT 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++    A G A +   V+E       +    G+G +I ++  + S+ E+ +G++++ 
Sbjct: 173 PEALSTLRVAIGTAISVLFVTE------TYGTNKGMGFFIVDAWMRISYTEMYVGIVVLG 226

Query: 564 CFVLAL 569
                L
Sbjct: 227 MAGFFL 232



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+  +   + LR++  + I+L+  F+ A    + +  G V+   +     IP L  L  
Sbjct: 50  QSMSAHLLASLLRIVIGISIALVLGFIVALSMFRYKNFGRVMDSFVYFCYPIPKLALLPI 109

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++             ++  I  I    ++ +  ++  SL NI ++   V  S   +  Q
Sbjct: 110 IMLLAGLG--------DVTKIIMIVLIIIFQIIVNLRDSLRNISKESFLVLTSLGATHAQ 161

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +L +P   P  +  + +++        A  ++ V +T     G+G +I  A      
Sbjct: 162 LMRHLVLPAITPEALSTLRVAIG------TAISVLFVTETYGTNKGMGFFIVDAWMRISY 215

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +   ++ +    F    L+
Sbjct: 216 TEMYVGIVVLGMAGFFLFLLV 236


>gi|303246777|ref|ZP_07333054.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302491794|gb|EFL51674.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 254

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+ R +  + IA+ + +P+G+ +G    ++  + P  +LL   P     P  +
Sbjct: 50  LPLQAGQTLTRALAGLGIAAAVAVPLGLGMGVSRRLARLLSPTVELLRPVPPPAIIPAAM 109

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +         + IL   + GA A P  F+  A+++ ++ +     ++
Sbjct: 110 LLFGIGSGMKVFVVFF----ACFFPILVGAMDGARAVPPQFRLTAAAYGLSRFDTLARVM 165

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G  TA   A   +++SE+         T+G+G YI       + PE+  G
Sbjct: 166 LPAAGPSVAAGFRTAVPMALIVAVLSEMIG------ATSGIGHYILRMQRTFAIPEMYAG 219

Query: 559 VLIMCCFVLALN 570
           V ++    L LN
Sbjct: 220 VAMLGILGLGLN 231



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 18/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRM 72
           R    +   +A   +   ++ L         P  I+ +    L V   LP  A +T  R 
Sbjct: 2   RRVSGLIVFVALACLWEAVSRLGIVSHLYFPPVSIIAVTFWKLTVSGLLPLQAGQTLTRA 61

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+ + I+             SRRL  +L P +++++ +P    +   ++ F      KV 
Sbjct: 62  LAGLGIAAAVAVPLGLGMGVSRRLARLLSPTVELLRPVPPPAIIPAAMLLFGIGSGMKVF 121

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A  F I    +             +P      + ++ LS +     + +P + P +
Sbjct: 122 VVFFACFFPILVGAM--------DGARAVPPQFRLTAAAYGLSRFDTLARVMLPAAGPSV 173

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 ++       V SEMI          GIG YI    +   +  +   +  +  + 
Sbjct: 174 AAGFRTAVPMALIVAVLSEMIG------ATSGIGHYILRMQRTFAIPEMYAGVAMLGILG 227

Query: 253 FLYDQLLFR---PMIVWSN 268
              +  + R    ++ W +
Sbjct: 228 LGLNAAVERVTARLLRWHD 246


>gi|238895155|ref|YP_002919890.1| putative ABC-type transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238547472|dbj|BAH63823.1| putative ABC-type transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 251

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 70/196 (35%), Gaps = 10/196 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + D   ++     ++  + + +++ +      G+ IG+   I   + P  +LL   P
Sbjct: 41  EVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIGWSQRIGYWVHPVLRLLGPVP 100

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +                L+   T + +     +G       + +VA +   +
Sbjct: 101 STALLPLCLFIFPSSFG----ASVFLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGAS 156

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + +P   P    G     G +++  IV+E+          +G+G Y+  +   
Sbjct: 157 QRFLILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVG------VKSGIGFYLQWAQGW 210

Query: 550 GSFPEVVLGVLIMCCF 565
            ++P +   +L+M   
Sbjct: 211 AAYPNMYAALLVMALL 226



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 69/169 (40%), Gaps = 14/169 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+       S+R+G  + P+L ++  +P    L   +  F + +         A++F I
Sbjct: 72  GFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFG--------ASVFLI 123

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             S  + +T   +  +  I +   +V+R+   S       + +P ++P +   + M +  
Sbjct: 124 ALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMGLGA 183

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  ++ +EM+ V        GIG Y+  A        +  A+L M  +
Sbjct: 184 SFSVLIVAEMVGVKS------GIGFYLQWAQGWAAYPNMYAALLVMALL 226


>gi|86748058|ref|YP_484554.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86571086|gb|ABD05643.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 261

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 84/257 (32%), Gaps = 15/257 (5%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           + F   +             +  I  F V    A G             T +D    IW 
Sbjct: 1   MPFAVSKTTAARVRRASELAVGPILLFGVWWLAARGGWVNRDLLPSPVDTLRDTAANIWS 60

Query: 383 GCIT------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           G +T      + RV   I IA I  +P+GI +G +  +   ++       + PA   FPL
Sbjct: 61  GSMTEDFWSTLVRVGYSIAIAIIAGVPIGIVLGAKATVYRSVEFIIDFFRSTPATAMFPL 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       L      +          I+FNV  G           A S   +  R +R 
Sbjct: 121 FLLLFGLGDLAKVAVAAFAAWLV----IVFNVAYGVMNARQTRILAARSMGASSLRIFRD 176

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I     P    G  TA   A    IV+E+         T G+G  I ++    S  ++ 
Sbjct: 177 VIFFETLPQTFIGLRTAVSLALVVIIVAEMFIGA-----TDGMGHRIIDAQISYSLTDMY 231

Query: 557 LGVLIMCCFVLALNRFL 573
             +LI       LN  L
Sbjct: 232 GSILIAGAMGYGLNLIL 248



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 90/254 (35%), Gaps = 20/254 (7%)

Query: 23  LAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  +L+ G+  +   G          P D +      +   S+ +    T +R+  ++ I
Sbjct: 21  VGPILLFGVWWLAARGGWVNRDLLPSPVDTLRDTAANIWSGSMTEDFWSTLVRVGYSIAI 80

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++       +      +   +  I+D  +S P        ++ F      KV  A  AA
Sbjct: 81  AIIAGVPIGIVLGAKATVYRSVEFIIDFFRSTPATAMFPLFLLLFGLGDLAKVAVAAFAA 140

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I         F++   + N  +     +RS   S  + F  +    ++P     +  
Sbjct: 141 WLVI--------VFNVAYGVMNARQTRILAARSMGASSLRIFRDVIFFETLPQTFIGLRT 192

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++S     ++ +EM +         G+G  I  A     L  +  ++L    + +  + +
Sbjct: 193 AVSLALVVIIVAEMFIGATD-----GMGHRIIDAQISYSLTDMYGSILIAGAMGYGLNLI 247

Query: 259 LF---RPMIVWSNK 269
           L    R +I WS K
Sbjct: 248 LLFLERSVIHWSGK 261


>gi|148252738|ref|YP_001237323.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146404911|gb|ABQ33417.1| putative ABC transporter permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 279

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 27/254 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGC------ 384
               ++R+     I W  +   +   IA   +  I ++     + V+  +W G       
Sbjct: 16  PTKPSRRLGLGSPIAWIGLAVLILSWIAAVKLLNIPSYILPKPEAVVRALWSGLAVSPAS 75

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGF----RPHISSKIQPFAQLLAAFPANVFFP 435
                + ++  +    +   I + +G+ IG        I   + P+A  L + P     P
Sbjct: 76  PLGYYLPLWSTLSNAAVGCAIGVGLGLVIGSLMAEVEAIERLVMPYAFALQSLPKVAIAP 135

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V    +   +     +LL    + + +L N   G  A   +  ++  S   +    +R
Sbjct: 136 LIVIWFGFGDGSKIAISALL----SFFPVLINSFTGLRAVEPERLDLMRSLSASRLETYR 191

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P+   G   A   A   +IV+E            G+G  I ++        V
Sbjct: 192 IVKLPNAAPFIFAGLDMAVVYALLGAIVAEFLG------AQRGMGVVITQAQAVSDVAGV 245

Query: 556 VLGVLIMCCFVLAL 569
              ++I+    + L
Sbjct: 246 FAALIILGVLGIVL 259



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T         I +    V  +L A+   +  +++P    +QS+P +      V++F    
Sbjct: 86  TLSNAAVGCAIGVGLGLVIGSLMAEVEAIERLVMPYAFALQSLPKVAIAPLIVIWFGFGD 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  + L + F         +  + +  L  +  +  ++ RS   S  + +  + +P 
Sbjct: 146 GSKIAISALLSFF--------PVLINSFTGLRAVEPERLDLMRSLSASRLETYRIVKLPN 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + M++       + +E +          G+G  I  A    D+  +  A++ 
Sbjct: 198 AAPFIFAGLDMAVVYALLGAIVAEFLG------AQRGMGVVITQAQAVSDVAGVFAALII 251

Query: 248 MLGVIFLY 255
           +  +  + 
Sbjct: 252 LGVLGIVL 259


>gi|110633165|ref|YP_673373.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110284149|gb|ABG62208.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 258

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +   F+     GV+  +    +    +         +     +T++ V     ++++
Sbjct: 25  VALLALWFFATEFGGVSRFLLPSPVSVADSLVQMIADGTIAGELAVTLYEVFSAFGLSAV 84

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + +G ++    ++     P    L A P  +    ++                  I  
Sbjct: 85  VGLGIGFFVARSAYLVEVFTPVFSALFAVPVIL----LLPLFVLLLGLGPESKIAAGIAS 140

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + I+ + I G       +   A S   + W+ +  I++P   P  ++G       ++ 
Sbjct: 141 CFFPIVLSAIVGFGKIDRIYMLAARSMGASHWQLFARIMMPAALPAILSGLRLGFVISFL 200

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + + +E  +        +GLG  I E++E     ++   ++++      LN  +
Sbjct: 201 SVLGAETIA------ARSGLGRAIVEASENLRIDKMFALIVVVVFLAFLLNLLV 248



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 90/251 (35%), Gaps = 19/251 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQYASRT 68
           R  P     + F++ +  +                 P  + D +   +   ++    + T
Sbjct: 12  RNRPATVVQIGFLVALLALWFFATEFGGVSRFLLPSPVSVADSLVQMIADGTIAGELAVT 71

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              + SA  +S +         A+S  L  V  P+   + ++P        V+  + L+ 
Sbjct: 72  LYEVFSAFGLSAVVGLGIGFFVARSAYLVEVFTPVFSALFAVP--------VILLLPLFV 123

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +     + I A   S  + +  S       I R     +RS   S WQ F  + +P +
Sbjct: 124 LLLGLGPESKIAAGIASCFFPIVLSAIVGFGKIDRIYMLAARSMGASHWQLFARIMMPAA 183

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + +     +  V+ +E I          G+G  I  A +   +  +   ++ +
Sbjct: 184 LPAILSGLRLGFVISFLSVLGAETIA------ARSGLGRAIVEASENLRIDKMFALIVVV 237

Query: 249 LGVIFLYDQLL 259
           + + FL + L+
Sbjct: 238 VFLAFLLNLLV 248


>gi|313894364|ref|ZP_07827929.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           sp. oral taxon 158 str. F0412]
 gi|313441188|gb|EFR59615.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           sp. oral taxon 158 str. F0412]
          Length = 510

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A VI+ +   +      + +RL + ++ +++ + +IP +  L   +            
Sbjct: 27  VLASVIATIIGGLLGMFIYEYKRLAVPVMVVVNFLYTIPSISMLGLLLYVSGVGNT---- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + +  L  I + + E   +  L+  Q+ W + +P +MP +
Sbjct: 83  ----TAIIALVIYALLPMVRNTFTGLNQIDQSMCEAGIALGLTRIQRLWNIEIPLAMPTI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I        +   L +  + 
Sbjct: 139 MAGIRT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIVGSLLIALLA 191

Query: 253 FLYDQLL 259
              D L 
Sbjct: 192 ITVDALF 198



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 16/197 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  +IA+II   +G++I     ++  +      L   P+     L++      +    +
Sbjct: 27  VLASVIATIIGGLLGMFIYEYKRLAVPVMVVVNFLYTIPSISMLGLLLYVSGVGNTTAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E   +  +T  +    I +P   P  + G 
Sbjct: 87  ALVIYALL----PMVRNTFTGLNQIDQSMCEAGIALGLTRIQRLWNIEIPLAMPTIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         +++   +     +   GLG  I            ++G L++    + ++
Sbjct: 143 RT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIVGSLLIALLAITVD 195

Query: 571 RFLWHPLYLYGTRCLRL 587
                 L+  G R  R+
Sbjct: 196 -----ALFSLGERVTRI 207


>gi|52144867|ref|YP_081963.1| ABC transporter, permease [Bacillus cereus E33L]
 gi|51978336|gb|AAU19886.1| ABC transporter, permease [Bacillus cereus E33L]
          Length = 265

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ ++ A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 70  TLQEVIIGLLFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 129 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQIYQKVKFPAVLPY 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 186 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 238

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 239 VTLCLYFI 246



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 95/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  ++ ++L
Sbjct: 24  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLTNTMQTLQEVIIGLLFAIL 83

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 84  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 143 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQIYQKVKFPAVLPYFFSGLKIAVT 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 196 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 246


>gi|300855715|ref|YP_003780699.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
           13528]
 gi|300435830|gb|ADK15597.1| putative ABC transporter, permease component [Clostridium
           ljungdahlii DSM 13528]
          Length = 247

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 95/247 (38%), Gaps = 15/247 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R   +I   L F  +   + + +  +     P  I++ +   L       +   T L  
Sbjct: 2   KRYRSSIIVALLFFAIWQALAMYIDAMYILPSPTAILEKI-WELKDILFLVHLPATLLIT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  ++IS++   V A     S R+   L PI+ + Q++PI       +++F      KV+
Sbjct: 61  IEGLLISIVLGVVLAVAMNISERIQRALYPIVIVTQTVPITALAPIFILWFGYGIWSKVL 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +T ++Y  L +  +D+EE+  ++  S    F  L  P S+P  
Sbjct: 121 VTVLITFF--------PITINVYDGLRSTRKDMEEILITYGASKKDIFMKLKFPASLPYF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + M++         SE +          G+G +    + + D   +   ++ +    
Sbjct: 173 FSALKMAVPLSVVGAAVSEWLG------AEAGLGYFSKRMMTQMDGAGVFAPIVILSLAA 226

Query: 253 FLYDQLL 259
            +  ++L
Sbjct: 227 LILVEIL 233



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 87/243 (35%), Gaps = 16/243 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
              R S ++ + +F +   +A+ I            +   +  +D+L+++ L   T+   
Sbjct: 2   KRYRSSIIVALLFFAIWQALAMYIDAMYILPSPTAILEKIWELKDILFLVHLPA-TLLIT 60

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++I+ ++ + + + +     I   + P   +    P     P+ +    Y       
Sbjct: 61  IEGLLISIVLGVVLAVAMNISERIQRALYPIVIVTQTVPITALAPIFILWFGYG----IW 116

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L+ +  T + I  NV  G  +   D +E+  ++  +    +  +  P   PY+ +  
Sbjct: 117 SKVLVTVLITFFPITINVYDGLRSTRKDMEEILITYGASKKDIFMKLKFPASLPYFFSAL 176

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   +   + VSE            GLG +      +     V   ++I+    L L 
Sbjct: 177 KMAVPLSVVGAAVSEWLG------AEAGLGYFSKRMMTQMDGAGVFAPIVILSLAALILV 230

Query: 571 RFL 573
             L
Sbjct: 231 EIL 233


>gi|332073012|gb|EGI83492.1| substrate binding domain of ABC-type glycine betaine transport
           system family protein [Streptococcus pneumoniae GA41301]
          Length = 506

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ +  + 
Sbjct: 49  KLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPILQNT 100

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  I  +L+E   +F ++ W++     +P +MP ++  +            A+ +I+
Sbjct: 101 ITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIR----------TAAVLII 150

Query: 215 VGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              T   +I   G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 151 GTATLAALIGAGGLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDLNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|319790811|ref|YP_004152451.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315593274|gb|ADU34340.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 256

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+    + ++I +++ I +G+ +G     +       ++L   P+    PL +    +
Sbjct: 62  GFTLGTAALGLLIGAVLGIALGLVLGLSRRAAQLGSVSIEVLRPVPSVALIPLAMLAFGF 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++ F T W +L  V +          EV+    ++       I+LP I 
Sbjct: 122 G----VRMELAIVAFATFWPLLVLVQSAVQQIEPRLLEVSRVLGLSARERAFKIVLPAIV 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P            A   ++  E+A+  +      G+G  +  + +      ++  +  + 
Sbjct: 178 PRLFVALRLGVAVALVVAVTVEIAANPN------GMGYAMMIAQQSFDPALMLAWLGWIG 231

Query: 564 CFVLALN 570
               A+N
Sbjct: 232 VVGFAVN 238



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 14/228 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
                    G      P              SL Q    T       ++I  +       
Sbjct: 25  WYARRAAALGSDALAPPSAAAKAFAGAALDGSLWQATGFTLGTAALGLLIGAVLGIALGL 84

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +   SRR   +    +++++ +P +  +   ++ F      ++          +  +  W
Sbjct: 85  VLGLSRRAAQLGSVSIEVLRPVPSVALIPLAMLAFGFGVRMELA--------IVAFATFW 136

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +   +  ++  I   L EVSR   LS  ++ + + +P  +P L   + + ++      V
Sbjct: 137 PLLVLVQSAVQQIEPRLLEVSRVLGLSARERAFKIVLPAIVPRLFVALRLGVAVALVVAV 196

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             E+    +      G+G  + +A +  D   +L  +  +  V F  +
Sbjct: 197 TVEIAANPN------GMGYAMMIAQQSFDPALMLAWLGWIGVVGFAVN 238


>gi|297180099|gb|ADI16323.1| ABC-type proline/glycine betaine transport system, permease
           component [uncultured bacterium HF0070_11A08]
          Length = 691

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 14/194 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  T   +  ++ +++L  F     A  SRR    ++P+LDI+Q++P   +L   ++ F 
Sbjct: 124 SMNTLSLVAISVPMAILLGFGLGVWAFYSRRAERAIMPLLDILQTVPAFAYLLLILMLFG 183

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      +  + A        M  +    L  +  ++ E       +G Q FW + 
Sbjct: 184 --------FGTVVGLIASVLYSFPPMVRNTIVGLRRVAAEVIESGLMSGATGRQLFWQVR 235

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP +   L+  +  +       V+ + +I           IG  +   I++      L A
Sbjct: 236 VPSAKRQLLLGVNQATMASLSMVIIASIIGGTAD------IGWEVLSQIRKAQFGESLLA 289

Query: 245 MLTMLGVIFLYDQL 258
            L +  +  + D++
Sbjct: 290 GLVIALMAMVIDRV 303



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 15/200 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V  +   A  +      A++IS +        AA +  +  +L PI D +Q++P+   L 
Sbjct: 489 VTGIWPEAMLSVYLCSIAVIISFILGAGLGIWAASNDTVSAILRPINDTLQTMPLFVILI 548

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+ F           E  A+ AI    +          L N+P  + E ++    S  
Sbjct: 549 PFVMIFKIG--------EFTALLAIVAYAIVPAIRYTEHGLRNLPEGVIEAAQMMGCSHR 600

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P ++P ++  +  ++  G   +V + ++          G+   + + + + +
Sbjct: 601 QMLWSVKIPLALPVMMLGLNQTIMYGIAMLVIAALVGTN-------GLEQIVYIGLSDGN 653

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
               L A +++  +  + D+
Sbjct: 654 FGLGLIAGISLAIIAMIADR 673



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 89/281 (31%), Gaps = 13/281 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV---SYMLDIFWFC 350
              +       F   L+  +  L   LG +               RV   +    +  F 
Sbjct: 32  LAAYPKDLIIPFADWLNAIMDWLVTHLGWLFMGMSWLLEWPIKGVRVVLQALPWSVTGFL 91

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
                 I   W+   + +    Y  ++        T+  V + + +A ++   +G+W  +
Sbjct: 92  FCLVAYIASGWRLAVFTLASCLYMVIIGYWPESMNTLSLVAISVPMAILLGFGLGVWAFY 151

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  I P   +L   PA  +  L++    +  +   +   L     +   ++ N I 
Sbjct: 152 SRRAERAIMPLLDILQTVPAFAYLLLILMLFGFGTVVGLIASVLY----SFPPMVRNTIV 207

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      +  E       TG + +  + +P      + G   A   + +  I++ +    
Sbjct: 208 GLRRVAAEVIESGLMSGATGRQLFWQVRVPSAKRQLLLGVNQATMASLSMVIIASIIGGT 267

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                   +G  +     K  F E +L  L++    + ++R
Sbjct: 268 AD------IGWEVLSQIRKAQFGESLLAGLVIALMAMVIDR 302



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 16/235 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396
           + L    +  +  +    AW+  G  +   T+  + +++  G      ++++   + +II
Sbjct: 450 FGLTKMPWPALLLIYSYAAWRIGGTRLGLGTFFGLGFIVVTGIWPEAMLSVYLCSIAVII 509

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + I+   +GIW      +S+ ++P    L   P  V     V           L +    
Sbjct: 510 SFILGAGLGIWAASNDTVSAILRPINDTLQTMPLFVILIPFVMIFKIGEFTALLAIVAYA 569

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I     Y       G    P    E A     +  +    + +P   P  + G       
Sbjct: 570 IVPAIRY----TEHGLRNLPEGVIEAAQMMGCSHRQMLWSVKIPLALPVMMLGLNQTIMY 625

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                +++ +         T GL   +      G+F   ++  + +    +  +R
Sbjct: 626 GIAMLVIAALVG-------TNGLEQIVYIGLSDGNFGLGLIAGISLAIIAMIADR 673


>gi|327481631|gb|AEA84941.1| ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166]
          Length = 264

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 14/238 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
                    +  +LV      LL            +      + + +  ++   T    L
Sbjct: 16  DRLAPWLAFVVLLLVWEAACRLLKLPSFVLPSPSAILAATQKVGLGAWAEHIFATLRVTL 75

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +S+L     A   A SR +   L P+L I+QS          +V    +    +  
Sbjct: 76  MGYGLSILIGIPLAIALASSRVMSRTLYPLLVIVQST--------PIVAVAPIIVVVMGA 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L  +F  F    + +  S    L   P +L E+SRS   S  +++  + +P+++P L 
Sbjct: 128 GDLPRVFITFLIAFFPIVVSCVTGLLATPEELVELSRSLGASKAREYRNIRLPYAIPHLF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + +S++      V +E +          G+G +I  +     +     A++ ++ +
Sbjct: 188 SALRISITLAVIGAVVAEFVA------AEKGLGYFINFSTSMFQVPQAFAALMMLVVI 239



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 85/246 (34%), Gaps = 15/246 (6%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG- 383
                + L+  +++   ++  +    V       +   S               V     
Sbjct: 4   IKPRTHRLKTQADRLAPWLAFVVLLLVWEAACRLLKLPSFVLPSPSAILAATQKVGLGAW 63

Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+   ++   ++ +I IP+ I +     +S  + P   ++ + P     P++V 
Sbjct: 64  AEHIFATLRVTLMGYGLSILIGIPLAIALASSRVMSRTLYPLLVIVQSTPIVAVAPIIVV 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +    L        +      + I+ + + G  A P +  E++ S   +  R +R I L
Sbjct: 124 VMGAGDL----PRVFITFLIAFFPIVVSCVTGLLATPEELVELSRSLGASKAREYRNIRL 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P+  +    +   A   ++V+E  +         GLG +I  ST     P+    +
Sbjct: 180 PYAIPHLFSALRISITLAVIGAVVAEFVAAEK------GLGYFINFSTSMFQVPQAFAAL 233

Query: 560 LIMCCF 565
           +++   
Sbjct: 234 MMLVVI 239


>gi|154247381|ref|YP_001418339.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154161466|gb|ABS68682.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 296

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 6/162 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +   +     +    PA    PL +  +     +    L L+M+    W      + G
Sbjct: 126 PFLKEVLLTLTAMFNPLPAIALLPLAMLWLGLGEAS----LLLVMVHAVLWPFALAALTG 181

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P   + V  ++ + G  +   I++P   P  ++G   A   AW   I +E+     
Sbjct: 182 FEQVPETQRLVGRNYGLKGLHYVALILIPAALPSLLSGLKIAWAFAWRTLIAAELVFG-- 239

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  R  GLG +I  +  +     V  G++ +    LA+    
Sbjct: 240 VSSRAGGLGWFIYRNRNELLTDRVFAGLVTVIVIGLAVEVLF 281



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 81/213 (38%), Gaps = 10/213 (4%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D +  +   L    L   A  +   ++   V+++    V  + A     L  VL+ +  +
Sbjct: 79  DTMSALASALSEGDLLPTALASLAVLVKGYVLAVALALVLVSAAIAVPFLKEVLLTLTAM 138

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
              +P +  L   +++            E + +  +  + +W    +       +P    
Sbjct: 139 FNPLPAIALLPLAMLWLGLG--------EASLLLVMVHAVLWPFALAALTGFEQVPETQR 190

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
            V R++ L G      + +P ++P L+  + ++ +  W  ++A+E++    +     G+G
Sbjct: 191 LVGRNYGLKGLHYVALILIPAALPSLLSGLKIAWAFAWRTLIAAELVFGVSS--RAGGLG 248

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +I     E     +   ++T++ +    + L 
Sbjct: 249 WFIYRNRNELLTDRVFAGLVTVIVIGLAVEVLF 281


>gi|332283348|ref|YP_004415259.1| binding-protein-dependent transport systems inner membrane
           component [Pusillimonas sp. T7-7]
 gi|330427301|gb|AEC18635.1| binding-protein-dependent transport systems inner membrane
           component [Pusillimonas sp. T7-7]
          Length = 253

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT+   V+  +I ++  +  G+W+G     S+ + P+     + P  +  P+  
Sbjct: 49  IYRHLGITLTETVLAFVIGTVAGLGFGLWLGLSRGASALLDPYITAANSMPRVILAPIFG 108

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   +       L+ F     + FNV  G     +   + A        +  R++ 
Sbjct: 109 MWFGLGIWSKVALAVTLVFFI----VFFNVYQGVREVSSTLLDNARMLGANRKQLLRHVY 164

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    +  +   T+ G A+  ++V E           +G+G  I ++        V  G
Sbjct: 165 IPSATSWVFSSLHTSVGLAFVGAVVGEYLG------SASGVGYLILQAEGTLDVNTVFAG 218

Query: 559 VLIMCCFVLALNRFL 573
           ++++  F L L+  +
Sbjct: 219 IVVLTVFALLLDGLV 233



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 89/252 (35%), Gaps = 18/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+  ++    +++  +       P ++  ++    +    + ++   T    + A VI  
Sbjct: 9   LVIVLVAWHYLSLDRNFAFFFGQPVEVARVIWAWFVTNADIYRHLGITLTETVLAFVIGT 68

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +    +      SR    +L P +    S+P +       ++F      KV  A     F
Sbjct: 69  VAGLGFGLWLGLSRGASALLDPYITAANSMPRVILAPIFGMWFGLGIWSKVALAVTLVFF 128

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F        F++YQ +  +   L + +R    +  Q   ++ +P +   +  ++  S+
Sbjct: 129 IVF--------FNVYQGVREVSSTLLDNARMLGANRKQLLRHVYIPSATSWVFSSLHTSV 180

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258
              +   V  E +          G+G  I  A    D+  +   ++ +     L D L  
Sbjct: 181 GLAFVGAVVGEYLGSAS------GVGYLILQAEGTLDVNTVFAGIVVLTVFALLLDGLVT 234

Query: 259 -LFRPMIVWSNK 269
            +   ++ W  K
Sbjct: 235 VVEDRLLAWKPK 246


>gi|209543034|ref|YP_002275263.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530711|gb|ACI50648.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
          Length = 331

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                D   +      ++  + V     + + I  G+ +G          PF +L+   P
Sbjct: 121 DVFLTDWKRLGDSLLHSLGLLAVGYATGATLGIATGLGLGRSRRFRYWALPFVRLIGPLP 180

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                PL +       L        LM  G+ + I     +G +A    + +VA +    
Sbjct: 181 PVALLPLAMVLFPSNWLASEA----LMTLGSGFPITVLTWSGVAAVDPAYYDVARTMGAR 236

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P    G     G ++   +V+E+          +GLG Y+  +   
Sbjct: 237 DRFLVLRVALPAAMPQIFVGLFMGLGMSFVVLVVAEMLG------VKSGLGFYMQWAQGW 290

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575
            ++P +   +L+M      L   L+ 
Sbjct: 291 AAYPNMYAALLVMSLMCTGLVTILFK 316



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 19/242 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VHSLPQYASRTTLRMLSAMVIS 79
             L +G+    +   +   +PR         LD        L      +   +       
Sbjct: 89  IALGLGLAAWEVAQAKLLLLPRPFFGTPQDLLDVFLTDWKRLGDSLLHSLGLLAVGYATG 148

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                       +SRR     +P + ++  +P +  L   +V F            LA+ 
Sbjct: 149 ATLGIATGLGLGRSRRFRYWALPFVRLIGPLPPVALLPLAMVLF--------PSNWLASE 200

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +     + +T   +  +  +     +V+R+           + +P +MP +   + M 
Sbjct: 201 ALMTLGSGFPITVLTWSGVAAVDPAYYDVARTMGARDRFLVLRVALPAAMPQIFVGLFMG 260

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   +  +V +EM+ V        G+G Y+  A        +  A+L M  +      +L
Sbjct: 261 LGMSFVVLVVAEMLGVKS------GLGFYMQWAQGWAAYPNMYAALLVMSLMCTGLVTIL 314

Query: 260 FR 261
           F+
Sbjct: 315 FK 316


>gi|153010911|ref|YP_001372125.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151562799|gb|ABS16296.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 262

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 79/218 (36%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + +     + +   IT+   ++   I +I  + +G W   +P +++   P+ + L +
Sbjct: 48  LRIYKWFADGTIWYHLGITLLEAMLAFAIGAIGGVLIGFWFARKPLLAAIFDPYVKALNS 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 108 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLANARMLG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP    +  +   TA G A   ++V E          + GLG  I ++ 
Sbjct: 164 MNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLG------SSAGLGYLIHQAE 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G+L++  FVL ++           +W P
Sbjct: 218 GVFDVTGVFAGMLVLTGFVLIIDWCVTIVEERLLVWRP 255



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+   +       ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 41  ATPGDVALRIYKWFADGTIWYHLGITLLEAMLAFAIGAIGGVLIGFWFARKPLLAAIFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 101 YVKALNSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   ++  Q    + +P ++  +  ++  ++       V  E +         
Sbjct: 153 QTVLANARMLGMNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGEYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   ML + G + + D    ++   ++VW  K
Sbjct: 208 -GLGYLIHQAEGVFDVTGVFAGMLVLTGFVLIIDWCVTIVEERLLVWRPK 256


>gi|264677370|ref|YP_003277276.1| probable ABC transporter permease HI0355 [Comamonas testosteroni
           CNB-2]
 gi|299533068|ref|ZP_07046454.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni S44]
 gi|262207882|gb|ACY31980.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni CNB-2]
 gi|298718953|gb|EFI59924.1| probable ABC transporter permease protein HI0355 [Comamonas
           testosteroni S44]
          Length = 253

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 14/178 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++ + T    L    +++      A    +S+ L  +++P L ++QS PI+      VV
Sbjct: 54  LEHVTATLQVALIGYALAIALAIPLAIAITRSQLLSKIIMPWLVVIQSTPIVAVAPIIVV 113

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                   +V+   L A F         +  S    L ++P +L E+SRS R +  +++W
Sbjct: 114 TLGAGLLPRVVITTLIAFF--------PLVVSTALGLASVPAELVELSRSLRATTSRQYW 165

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + +PF++P +   + +S++      V +E +          G+G  I  A     + 
Sbjct: 166 QIRMPFAVPYVFSALKVSITLAIVGAVVAEFVA------AEKGLGYLILFATSSFKVP 217



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   +A  + IP+ I I     +S  I P+  ++ + P     P++V  +   
Sbjct: 59  ATLQVALIGYALAIALAIPLAIAITRSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L       ++      + ++ +   G ++ P +  E++ S   T  R +  I +P   P
Sbjct: 119 LL----PRVVITTLIAFFPLVVSTALGLASVPAELVELSRSLRATTSRQYWQIRMPFAVP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           Y  +    +   A   ++V+E  +         GLG  I  +T     P
Sbjct: 175 YVFSALKVSITLAIVGAVVAEFVAAEK------GLGYLILFATSSFKVP 217


>gi|296445427|ref|ZP_06887384.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
 gi|296256993|gb|EFH04063.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
          Length = 251

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 94/230 (40%), Gaps = 14/230 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +       +L    + T  R+ +A ++++           +   +  +L 
Sbjct: 26  LPGPAPVFAAMLEQAQSGALFSNLAATLGRVAAAFLLAMSLGSALGYAMGRRALVDRLLD 85

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P L  +    ++            E AAI A+  +++ N    M +   ++
Sbjct: 86  PWVVVLLNLPALVVIVLAYLWAGL--------TEAAAIGAVALNKLPNAIVVMREGARSL 137

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L+E++ +FR S   +  ++  P   P +  +    +S  W  V+  E+I   +    
Sbjct: 138 DARLDEMAEAFRFSPATRLRHVVAPQLAPYIAASTRSGLSLVWKIVLVVELIGRSN---- 193

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             G+G  I +A +  D+  +L   +  + ++   + LL +P+    +++R
Sbjct: 194 --GVGFEINMAFQLFDVRLLLAYAIPFVLLMLGVETLLVQPLERHVSRWR 241



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 10/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +      T+ RV    ++A  +   +G  +G R  +   + P+  +L   PA V 
Sbjct: 40  AQSGALFSNLAATLGRVAAAFLLAMSLGSALGYAMGRRALVDRLLDPWVVVLLNLPALVV 99

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L               ++L  +       +  +  GA +      E+A +F  +    
Sbjct: 100 IVLAYLWAGLTEAAAIGAVALNKLPNA----IVVMREGARSLDARLDEMAEAFRFSPATR 155

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+++ P + PY      +     W   +V E+        R+ G+G  I  + +     
Sbjct: 156 LRHVVAPQLAPYIAASTRSGLSLVWKIVLVVELIG------RSNGVGFEINMAFQLFDVR 209

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            ++   +     +L +   L  PL  + +R
Sbjct: 210 LLLAYAIPFVLLMLGVETLLVQPLERHVSR 239


>gi|282849643|ref|ZP_06259027.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           parvula ATCC 17745]
 gi|282580580|gb|EFB85979.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           parvula ATCC 17745]
          Length = 510

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A VI+ +   +      + +RL   ++ +++ + +IP +  L   +            
Sbjct: 27  VLASVIATIIGGLLGVFIYEYKRLAAPVMVVVNFLYTIPSISMLGLLLYVSGVGNT---- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + +  L  I + + E   +  L+  Q+ W + +P +MP +
Sbjct: 83  ----TAIIALVIYALLPMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I        +   L +  + 
Sbjct: 139 MAGIRT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLA 191

Query: 253 FLYDQLL 259
              D L 
Sbjct: 192 ITVDALF 198



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 16/197 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  +IA+II   +G++I     +++ +      L   P+     L++      +    +
Sbjct: 27  VLASVIATIIGGLLGVFIYEYKRLAAPVMVVVNFLYTIPSISMLGLLLYVSGVGNTTAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E   +  +T  +    I +P   P  + G 
Sbjct: 87  ALVIYALL----PMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         +++   +     +   GLG  I            + G L++    + ++
Sbjct: 143 RT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAITVD 195

Query: 571 RFLWHPLYLYGTRCLRL 587
                 L+  G R  R+
Sbjct: 196 -----ALFSLGERVTRI 207


>gi|271968809|ref|YP_003343005.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270511984|gb|ACZ90262.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 248

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +I L   T+  ++   ++A+++ +  G  IG    ++  ++P+   L + P 
Sbjct: 40  VRLAHDGDLISLVAGTVATLLGGWVLAAVLGVLTGFLIGRHHLLAVALEPYLVALYSVPL 99

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL++            +L   ++  T   ++F    G       + E+A ++ +TG
Sbjct: 100 IALVPLMIIWFGIGQG----FLLATIVLSTGIMLVFPAATGTRESVRAYGELARAYRVTG 155

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R    ++LPG  PY   G   +   A  A +V +            GLG  ++++  + 
Sbjct: 156 HRLLLKVVLPGALPYIAAGLRISVQRALMAVVVGQFLVGH------PGLGTLLSDARARL 209

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
              EV    L+       L   +
Sbjct: 210 DADEVFAVALVSLAVGALLTALV 232



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 82/211 (38%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + T   +L   V++ +   +   L  +   L + L P L  + S+P++  +  
Sbjct: 46  GDLISLVAGTVATLLGGWVLAAVLGVLTGFLIGRHHLLAVALEPYLVALYSVPLIALVPL 105

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F               + +     V+       +S+        E++R++R++G +
Sbjct: 106 MIIWFGIGQG----FLLATIVLSTGIMLVFPAATGTRESVRA----YGELARAYRVTGHR 157

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P +   + +S+      VV      VG  ++  PG+G+ ++ A    D 
Sbjct: 158 LLLKVVLPGALPYIAAGLRISVQRALMAVV------VGQFLVGHPGLGTLLSDARARLDA 211

Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +    L  L V  L   L+    R +  W
Sbjct: 212 DEVFAVALVSLAVGALLTALVGWAGRRLSAW 242


>gi|170724212|ref|YP_001751900.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169762215|gb|ACA75531.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 287

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 105/261 (40%), Gaps = 15/261 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGII---NILLHGIQETTVPRDIVDIVPI--TLDVHSLPQY 64
            +++R++   +   A +LV+       I  +   +  +P  +     +   L    LP  
Sbjct: 27  PLAQRLWQQGWLRKAVILVVIAALWEAIARYQGNDLLLPSFLQTAAALWDGLRSGELPAK 86

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + + +L   V+ ++  F   +LA  ++    +L  +  +   +P +  L   +++F 
Sbjct: 87  VGVSLVILLKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPLALLWFG 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + + IF +  S +W +  + Y     +   L    R++ L G +   ++ 
Sbjct: 147 LG--------DNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHIL 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     +   
Sbjct: 199 VPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAG 256

Query: 245 MLTMLGVIFLYDQLLFRPMIV 265
           +  ++ +  L + L+F  +  
Sbjct: 257 LAVVILIGLLVEGLVFNTLER 277



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 85/275 (30%), Gaps = 9/275 (3%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           ++ L            +   Q    ++   ++ I           G       ++     
Sbjct: 14  LEPLLSVPLERNLPLAQRLWQQGWLRKAVILVVIAALWEAIARYQGNDLLLPSFLQTAAA 73

Query: 373 YQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             D L    L     +++  ++   ++  ++   +             +     +    P
Sbjct: 74  LWDGLRSGELPAKVGVSLVILLKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLP 133

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    PL +        +    L  +++    W +  N  AG        +    ++ + 
Sbjct: 134 AIALLPLALLWFGLGDNS----LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLK 189

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R   +I++P   P  ++G       AW   I +E+           GLG YI ++  +
Sbjct: 190 GLRLVLHILVPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNE 247

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
               +V  G+ ++    L +   +++ L     R 
Sbjct: 248 LYTDKVFAGLAVVILIGLLVEGLVFNTLERVTVRR 282


>gi|241888804|ref|ZP_04776110.1| periplasmic glycine betaine/choline-binding [Gemella haemolysans
           ATCC 10379]
 gi|241864480|gb|EER68856.1| periplasmic glycine betaine/choline-binding [Gemella haemolysans
           ATCC 10379]
          Length = 504

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 21/190 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++I++        + + +R+     + I  I Q+IP L  L   + +          
Sbjct: 26  LLSLIIAVFIAVPLGIIISGNRKTSEWFLQITGIFQTIPSLALLGLFIPFMGIG------ 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A+ A+    ++ +  S    L  I   LEE + +F ++  +K     +  +MP L
Sbjct: 80  --TLPAVVALVIYAIFPILQSTITGLSEIDPSLEEAATAFGMTKLEKLKKFKLALAMPIL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDT---VIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +  +            AS MI+   T   +I   G+GS+I L I   +   IL   ++  
Sbjct: 138 MSGVR----------TASIMIIGTATLAALIGAGGLGSFILLGIDRNNSALILIGAISSA 187

Query: 250 GVIFLYDQLL 259
            +  ++  L+
Sbjct: 188 VLAIIFGLLI 197



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 14/186 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +IIA  I +P+GI I      S        +    P+     L +  +    L   +
Sbjct: 26  LLSLIIAVFIAVPLGIIISGNRKTSEWFLQITGIFQTIPSLALLGLFIPFMGIGTLPAVV 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  IF     IL + I G S      +E A++F +T     +   L    P  ++G 
Sbjct: 86  ALVIYAIF----PILQSTITGLSEIDPSLEEAATAFGMTKLEKLKKFKLALAMPILMSGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFVL 567
            TA       + ++ +   G       GLG++I    ++ +   +++G +   ++     
Sbjct: 142 RTASIMIIGTATLAALIGAG-------GLGSFILLGIDRNNSALILIGAISSAVLAIIFG 194

Query: 568 ALNRFL 573
            L +FL
Sbjct: 195 LLIKFL 200


>gi|260889117|ref|ZP_05900380.1| ABC transporter, permease protein [Leptotrichia hofstadii F0254]
 gi|260861177|gb|EEX75677.1| ABC transporter, permease protein [Leptotrichia hofstadii F0254]
          Length = 268

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 77/208 (37%), Gaps = 10/208 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           + V      D   ++    IT+    + + +  ++   V + +    +    I P   + 
Sbjct: 42  FEVVKAFISDFPLLMEHTKITLIEAFLGLGLGIVLGFVVAVVMDRFEYAYKMIYPVLVIT 101

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL+V  + Y      L    L++  + + I   ++ G  +   D   +  +
Sbjct: 102 QTIPTVAIAPLLVLWLGYG----ILPKITLIVMTSFFPITIGLLDGFRSADKDMLNLLKT 157

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T ++ + ++ LPG   Y+  G   +   +   ++V+E           +GLG Y+  
Sbjct: 158 MGATPFQNFVHVKLPGSLGYFFAGLRISVSYSIIGAVVAEWLGG------FSGLGVYMTR 211

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +  SF ++   + ++    L L   +
Sbjct: 212 VRKSYSFDKMFAVIFLISAISLLLMYLV 239



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 75/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T +     + + ++  FV A +  +      ++ P+L I Q+IP +      V
Sbjct: 55  LMEHTKITLIEAFLGLGLGIVLGFVVAVVMDRFEYAYKMIYPVLVITQTIPTVAIAPLLV 114

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++             L  I  I  +  + +T  +     +  +D+  + ++   + +Q F
Sbjct: 115 LWLGYGI--------LPKITLIVMTSFFPITIGLLDGFRSADKDMLNLLKTMGATPFQNF 166

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+      + +S+S      V +E +          G+G Y+    K      
Sbjct: 167 VHVKLPGSLGYFFAGLRISVSYSIIGAVVAEWLGG------FSGLGVYMTRVRKSYSFDK 220

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   +  +  +  L   L+
Sbjct: 221 MFAVIFLISAISLLLMYLV 239


>gi|294794370|ref|ZP_06759506.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Veillonella sp.
           3_1_44]
 gi|294454700|gb|EFG23073.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Veillonella sp.
           3_1_44]
          Length = 513

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A VI+ +   +      + +RL   ++ +++ + +IP +  L   +            
Sbjct: 30  VLASVIATIIGGLLGVFIYEYKRLAAPVMVVVNFLYTIPSISMLGLLLYVSGVGNT---- 85

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + +  L  I + + E   +  L+  Q+ W + +P +MP +
Sbjct: 86  ----TAIIALVIYALLPMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTI 141

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I        +   L +  + 
Sbjct: 142 MAGIRT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLA 194

Query: 253 FLYDQLL 259
              D L 
Sbjct: 195 ITVDALF 201



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 16/197 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  +IA+II   +G++I     +++ +      L   P+     L++      +    +
Sbjct: 30  VLASVIATIIGGLLGVFIYEYKRLAAPVMVVVNFLYTIPSISMLGLLLYVSGVGNTTAII 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E   +  +T  +    I +P   P  + G 
Sbjct: 90  ALVIYALL----PMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         +++   +     +   GLG  I            + G L++    + ++
Sbjct: 146 RT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAITVD 198

Query: 571 RFLWHPLYLYGTRCLRL 587
                 L+  G R  R+
Sbjct: 199 -----ALFSLGERVTRI 210


>gi|51244353|ref|YP_064237.1| ABC transporter, permease protein [Desulfotalea psychrophila LSv54]
 gi|50875390|emb|CAG35230.1| probable ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 248

 Score = 83.8 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 14/234 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L++  + +++       +P  +     I     +L  +   T   ++  +++       
Sbjct: 13  LLLLWQLVVIITDAPHYILPGPLPVFHAIIDHWSTLMGHLQTTLTEIIFGILLGTALGIS 72

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A     S  L   L+P+L I Q+IP+       V++F      K+  A L   F     
Sbjct: 73  AALTMTFSPLLKRWLLPVLVISQAIPVFALAPILVLWFGYGMASKIAMAVLIIFF----- 127

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +T S Y  +      L E++R    S  +   Y+ +P +MP     + ++ +    
Sbjct: 128 ---PVTSSFYYGMQRTEPQLLELARIMNGSPMRIMRYIVIPAAMPAFASGLRLAAA---- 180

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             VA    V+G+ V    G+G Y+  A     +  +  A+  +  V  L   L+
Sbjct: 181 --VAPIGAVIGEWVGSSSGLGFYMIHANARMQIDVMFAALTILSVVSLLLYFLV 232



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   L + W  VV               V H        ++     T+  ++  I++ + 
Sbjct: 9   LGTGLLLLWQLVVIITDAPHYILPGPLPVFHAIIDHWSTLMGHLQTTLTEIIFGILLGTA 68

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I   + + F P +   + P   +  A P     P++V    Y   +      L++ F 
Sbjct: 69  LGISAALTMTFSPLLKRWLLPVLVISQAIPVFALAPILVLWFGYGMASKIAMAVLIIFF- 127

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  +   G         E+A   + +  R  RYI++P   P + +G   A   A  
Sbjct: 128 ---PVTSSFYYGMQRTEPQLLELARIMNGSPMRIMRYIVIPAAMPAFASGLRLAAAVAPI 184

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +++ E          ++GLG Y+  +  +     +   + I+    L L
Sbjct: 185 GAVIGEWVG------SSSGLGFYMIHANARMQIDVMFAALTILSVVSLLL 228


>gi|302340292|ref|YP_003805498.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301637477|gb|ADK82904.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 251

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 6/192 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +I +     +             +     LL   P     PLVV             +
Sbjct: 60  GALIGTAGAALLVFLASLGRRARQGVGLLNALLHPLPGIALLPLVVLWAGTG----TPAV 115

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L+M+    W +  N+ +G    P  ++E+A+++ +T  +   +++LP IFP  ++G  T
Sbjct: 116 LLVMVHSALWPVYLNLQSGIDEIPPRYREMAANWEMTMTQRLFHLVLPSIFPSLLSGLKT 175

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A    W A I +E+       L     G YI E         +  G+L++     A++RF
Sbjct: 176 AWARCWRALIAAEMVFGAAGFLGGL--GWYIFERRVYMDTAGLYAGLLLVMLSGAAVDRF 233

Query: 573 LWHPLYLYGTRC 584
           L+  L  +    
Sbjct: 234 LFGSLRRFTDCR 245



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSA 75
           ++ FV+   +I   L  +     P  +  +  I            LP     + L +   
Sbjct: 1   MIFFVIAAVLILWQLLSVSGLVSPILVPSLFSIGKALVRDTLSGLLPAQLLFSLLLVALG 60

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I      +   LA+  RR    +  +  ++  +P +  L   V++     P       
Sbjct: 61  ALIGTAGAALLVFLASLGRRARQGVGLLNALLHPLPGIALLPLVVLWAGTGTP------- 113

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A +  +  S +W +  ++   +  IP    E++ ++ ++  Q+ ++L +P   P L+  
Sbjct: 114 -AVLLVMVHSALWPVYLNLQSGIDEIPPRYREMAANWEMTMTQRLFHLVLPSIFPSLLSG 172

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  + +  W  ++A+EM+      +     G YI       D   +   +L ++      
Sbjct: 173 LKTAWARCWRALIAAEMVFGAAGFLGGL--GWYIFERRVYMDTAGLYAGLLLVMLSGAAV 230

Query: 256 DQLLFRPMIVWSN 268
           D+ LF  +  +++
Sbjct: 231 DRFLFGSLRRFTD 243


>gi|329767850|ref|ZP_08259365.1| hypothetical protein HMPREF0428_01062 [Gemella haemolysans M341]
 gi|328838769|gb|EGF88366.1| hypothetical protein HMPREF0428_01062 [Gemella haemolysans M341]
          Length = 261

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  ++  T L  +  + + ++  ++ A +          + P+L + Q+IP +      V
Sbjct: 55  LIFHSKITLLEAIIGLFLGIVIAWLLALIMDSIPIFNKTIYPLLVLTQTIPTIAIAPILV 114

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K        I  I  +  + +  S+     N  +D+  + R    S +Q  
Sbjct: 115 LWLGYGLTPK--------IVLIVLTTTFPIVVSILDGFRNCDKDMITLLRLMNASKFQIL 166

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W++ +P S+      + +S+S  +   V +E +          G+G Y+  A K  +   
Sbjct: 167 WHVKIPTSLSYFYAGLRVSVSYAFIAAVVAEWLGG------FEGLGVYMIKAKKLFEYDT 220

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   ++ +  +  L  +L+
Sbjct: 221 MFAIIILVSVISLLSIELV 239



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 77/195 (39%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+   IT+   ++ + +  +I   + + +   P  +  I P   L    P     P++V
Sbjct: 55  LIFHSKITLLEAIIGLFLGIVIAWLLALIMDSIPIFNKTIYPLLVLTQTIPTIAIAPILV 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + Y          +L++  T + I+ +++ G      D   +    + + ++   ++ 
Sbjct: 115 LWLGYGLT----PKIVLIVLTTTFPIVVSILDGFRNCDKDMITLLRLMNASKFQILWHVK 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    Y+  G   +   A+ A++V+E            GLG Y+ ++ +   +  +   
Sbjct: 171 IPTSLSYFYAGLRVSVSYAFIAAVVAEWLGGFE------GLGVYMIKAKKLFEYDTMFAI 224

Query: 559 VLIMCCFVLALNRFL 573
           ++++    L     +
Sbjct: 225 IILVSVISLLSIELV 239


>gi|313906584|ref|ZP_07839911.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313468591|gb|EFR63966.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 251

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 94/242 (38%), Gaps = 15/242 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R + P +      + +  + + +++       P +I+      L      +    T   +
Sbjct: 6   RNLLPPVLLTFCLLALWQVGSGVVNIEHIFPGPLEILKKT-WELRETLFMKQLPSTLTTI 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   +++     V ATL   S     +L P L I Q+IP++      V++F      ++I
Sbjct: 65  VGGWLLAAALGIVLATLMHFSSVAEAMLHPALVITQTIPVMCISPLFVLWFGYTVEARLI 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L+  FAI        T + +  L    R+  E+ +S        F+ + VP ++P  
Sbjct: 125 AVVLSTFFAI--------TLNTFDGLQRADREKIELMKSMGAGRRDIFFSMEVPSAVPMF 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + M++   W  + A+    V + +    G+G +    I   D  A+   +L +  + 
Sbjct: 177 ITGLKMTLP--WAVIDAA----VAEWLGATQGLGYFSRRMIIRMDGAAVFAPVLILTVLA 230

Query: 253 FL 254
            L
Sbjct: 231 LL 232



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  +V   ++A+ + I +   + F     + + P   +    P     PL V    Y  
Sbjct: 60  TLTTIVGGWLLAAALGIVLATLMHFSSVAEAMLHPALVITQTIPVMCISPLFVLWFGYT- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   + ++  T + I  N   G      +  E+  S        +  + +P   P 
Sbjct: 119 ---VEARLIAVVLSTFFAITLNTFDGLQRADREKIELMKSMGAGRRDIFFSMEVPSAVPM 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           ++TG       A   + V+E          T GLG +      +     V   VLI+   
Sbjct: 176 FITGLKMTLPWAVIDAAVAEWLG------ATQGLGYFSRRMIIRMDGAAVFAPVLILTVL 229

Query: 566 VLA 568
            L 
Sbjct: 230 ALL 232


>gi|225017761|ref|ZP_03706953.1| hypothetical protein CLOSTMETH_01690 [Clostridium methylpentosum
           DSM 5476]
 gi|224949412|gb|EEG30621.1| hypothetical protein CLOSTMETH_01690 [Clostridium methylpentosum
           DSM 5476]
          Length = 257

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P           D  +L  +   T       + + +  +FV A L  +   L   + P
Sbjct: 38  MLPSPTDVAAAFAGDFSALMGHLGTTLYEAFFGLALGVGLSFVVAFLMDRFSFLYKSVYP 97

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +L I Q+IP +      V++       KV    +   F         +T  +        
Sbjct: 98  LLVITQTIPAIAIAPLLVLWMGYDIAPKVTLVVIVCFF--------PVTVGLLDGFRTAD 149

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D   + RS     WQ F ++ +P SM      + ++++      V +E +   +     
Sbjct: 150 PDTVNLLRSMGAGRWQIFRHIKLPSSMGHFFAGLRVAVAYSVVGAVIAEWLGGYN----- 204

Query: 223 PGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            G+G Y+     +     + A+++ +  +  V+     LL + ++ W
Sbjct: 205 -GLGVYMIRVKKSYAYDKMFAVIFLISIISLVLMKGVSLLQKRVMPW 250



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     T++     + +   +   V   +     +   + P   +    PA   
Sbjct: 51  GDFSALMGHLGTTLYEAFFGLALGVGLSFVVAFLMDRFSFLYKSVYPLLVITQTIPAIAI 110

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V  + Y           L++    + +   ++ G      D   +  S     W+ 
Sbjct: 111 APLLVLWMGY----DIAPKVTLVVIVCFFPVTVGLLDGFRTADPDTVNLLRSMGAGRWQI 166

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R+I LP    ++  G   A   +   ++++E     +      GLG Y+    +  ++ 
Sbjct: 167 FRHIKLPSSMGHFFAGLRVAVAYSVVGAVIAEWLGGYN------GLGVYMIRVKKSYAYD 220

Query: 554 EVVLGVLIMCCFVLAL 569
           ++   + ++    L L
Sbjct: 221 KMFAVIFLISIISLVL 236


>gi|304395044|ref|ZP_07376928.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357297|gb|EFM21660.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 251

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 17/229 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P      + +  +   L  +   T   +LS M + +L   V A     S  L   ++P
Sbjct: 34  LLPSPAAVAIALWQNADYLSYHTLITLTEILSGMALGVLLGGVLALGMTYSPWLQRWMMP 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q+IP+       V++F      KV  A L   F         +T S +  L  + 
Sbjct: 94  LVITSQAIPVFALAPLLVLWFGFGMSAKVAMAVLVIFF--------PVTSSFFDGLRRVT 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +++R+   S   +  ++ +P ++P L   + M+ +      VA    ++G+ V   
Sbjct: 146 PGYLDLARTMGASPSAQLRHVRLPAALPALGSGLRMAAA------VAPIGAIIGEWVGSA 199

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVWSN 268
            G+G  +  A           A+  ++ +          L R +I W+ 
Sbjct: 200 EGLGFVMLNANARMQSDLCFAALFILVLMTLALWLTIDRLLRRLISWAP 248



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 17/245 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           + ++  +W   +  +   +        +    +Q+  Y+ +   IT+  ++  + +  ++
Sbjct: 16  AGLIAAWWLATLTCIPAFLLPSPAAVAIA--LWQNADYLSYHTLITLTEILSGMALGVLL 73

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
              + + + + P +   + P      A P     PL+V    +          L++ F  
Sbjct: 74  GGVLALGMTYSPWLQRWMMPLVITSQAIPVFALAPLLVLWFGFGMSAKVAMAVLVIFF-- 131

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +  +   G       + ++A +   +     R++ LP   P   +G   A   A   
Sbjct: 132 --PVTSSFFDGLRRVTPGYLDLARTMGASPSAQLRHVRLPAALPALGSGLRMAAAVAPIG 189

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL----NRFLWHP 576
           +I+ E            GLG  +  +  +         + I+    LAL    +R L   
Sbjct: 190 AIIGEWVG------SAEGLGFVMLNANARMQSDLCFAALFILVLMTLALWLTIDRLL-RR 242

Query: 577 LYLYG 581
           L  + 
Sbjct: 243 LISWA 247


>gi|255322994|ref|ZP_05364130.1| abcb protein [Campylobacter showae RM3277]
 gi|255299856|gb|EET79137.1| abcb protein [Campylobacter showae RM3277]
          Length = 265

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 76/193 (39%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ R +V +  A  I I +G+  G     ++ ++P    L + P  ++  L +    + 
Sbjct: 74  ITLVRSLVGVGTACAIGITLGLVAGAYKSFAAFLKPVITTLLSMPPIIWIVLAIFWFGFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + +        +I         + + G  +   + KE+  ++ +   +  R++ +P +  
Sbjct: 134 NAS----TIFTIIITVLPLTFASSMVGMMSVSEELKEMFDAYKLGVCKKIRHLYVPHLTS 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + ++    A G      I+ E+           G+GA IA +       EV+  V++   
Sbjct: 190 HIISSLSVAVGMGVKIVIMGELLG------ANDGMGAKIASARVMLDTTEVMAYVVLTIA 243

Query: 565 FVLALNRFLWHPL 577
            ++     +  PL
Sbjct: 244 IIMLFEYLVIEPL 256



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 84/196 (42%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R L  +  +         +A   +     L P++  + S+P + ++   + +F    
Sbjct: 75  TLVRSLVGVGTACAIGITLGLVAGAYKSFAAFLKPVITTLLSMPPIIWIVLAIFWFG--- 131

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    + IF I  + +     S    + ++  +L+E+  +++L   +K  +L VP 
Sbjct: 132 -----FGNASTIFTIIITVLPLTFASSMVGMMSVSEELKEMFDAYKLGVCKKIRHLYVPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ +++  G   V+  E++   D      G+G+ IA A    D   ++  ++ 
Sbjct: 187 LTSHIISSLSVAVGMGVKIVIMGELLGAND------GMGAKIASARVMLDTTEVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
            + +I L++ L+  P+
Sbjct: 241 TIAIIMLFEYLVIEPL 256


>gi|84625907|ref|YP_453279.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84369847|dbj|BAE71005.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 489

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 27/242 (11%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     V  L +Y       +  ++ ++LL       L
Sbjct: 257 QVKLERQSEAAVAAHWLGLTPASETDSRVARLLRYTREHLALVGISLGLALLLALPLGVL 316

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 317 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 368

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  L +IPR+L + + +  L  W + W + +P +   +V  +             
Sbjct: 369 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQT----------- 417

Query: 210 SEMIVVGDTV----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           + +I VG T     I   G G  I   I+  DL  IL   L    V+ L  Q  F  +  
Sbjct: 418 AAVINVGTTTLGALIGAGGYGQPILTGIRLDDLGLILEGALP-AAVLALLVQAAFEGLER 476

Query: 266 WS 267
           W+
Sbjct: 477 WA 478



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 319 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG-AKPAIAALFLY---SLLPIVRNTH 374

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG ++ P + ++ A +  +  W     + LP      V G  TA       + +  +   
Sbjct: 375 AGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTTTLGALIGA 434

Query: 530 GHI 532
           G  
Sbjct: 435 GGY 437


>gi|16080114|ref|NP_390940.1| permease [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311001|ref|ZP_03592848.1| hypothetical protein Bsubs1_16661 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315327|ref|ZP_03597132.1| hypothetical protein BsubsN3_16572 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320244|ref|ZP_03601538.1| hypothetical protein BsubsJ_16493 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324527|ref|ZP_03605821.1| hypothetical protein BsubsS_16637 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669149|sp|O34649|YTLD_BACSU RecName: Full=Uncharacterized ABC transporter permease protein ytlD
 gi|2293295|gb|AAC00373.1| YtlD [Bacillus subtilis]
 gi|2635546|emb|CAB15040.1| putative permease of ABC transporter [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291485499|dbj|BAI86574.1| hypothetical protein BSNT_04457 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 270

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   L   SL  +   T    +   ++        A L   S RL  +L P
Sbjct: 56  SSPSAVWRLLLEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLAALLWWSNRLARILDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVILNAMPKVALGPILIVALGPSFISIIAMGAIISVIITTIV--------VYTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F    W  F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ENYTKVMKTFGAKKWVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++L +     L  Q
Sbjct: 222 VGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLMYQ 256



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   +    W+ +              ++    +T+F  V+  ++ + +   +   
Sbjct: 49  WIDPLIFSSPSAVWRLL------LEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLAAL 102

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           + +   ++  + P+  +L A P     P+++  +    ++    +  +    +       
Sbjct: 103 LWWSNRLARILDPYLVILNAMPKVALGPILIVALGPSFIS----IIAMGAIISVIITTIV 158

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V         ++ +V  +F    W  ++ +ILP   P  ++      G +W   IV E  
Sbjct: 159 VYTAFQEVDENYTKVMKTFGAKKWVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFL 218

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 +   GLG  I    +  +F  V L +LI+  F   +
Sbjct: 219 ------VSKVGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLM 254


>gi|298247444|ref|ZP_06971249.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297550103|gb|EFH83969.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 271

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 90/264 (34%), Gaps = 15/264 (5%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-----TVPRDIVDIVPIT 55
           M L    P        P      A  + + +I  L   +          P   +  +   
Sbjct: 1   MRLSISQPATSRTTTLPGWLRYTAIAIGLLVIWQLYISLSGVNPLLVASPLSSMQALITD 60

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                LP     +   +   + I +    + A+L+        +L  +  +   +P +  
Sbjct: 61  TSNGQLPGAVLVSLQNLAIGIGIGITIGLILASLSIFFPFGRDLLTVLTAVFSPLPGIAI 120

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L  T+++F          +  + IF +  S +W ++ +       I      V+ +  LS
Sbjct: 121 LPLTMIWFGL--------SSSSIIFVVVFSSIWPISANTDTGFRTISNTTRMVALNLGLS 172

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P ++P ++  + ++ + GW  VV +E++            G YI  A   
Sbjct: 173 RTQTVRDVFLPAALPYILSGLRLAWAFGWRTVVGAEIVFGVSGSSGGL--GWYINNARYF 230

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            +  AI   ++ +  +  L D   
Sbjct: 231 LNPPAIFAGLVVISLLGILLDTFF 254



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 6/162 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P     +     + +  P     PL +        +    +  +++F + W I  N   G
Sbjct: 99  PFGRDLLTVLTAVFSPLPGIAILPLTMIWFGLSSSS----IIFVVVFSSIWPISANTDTG 154

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                N  + VA +  ++  +  R + LP   PY ++G   A    W   + +E+     
Sbjct: 155 FRTISNTTRMVALNLGLSRTQTVRDVFLPAALPYILSGLRLAWAFGWRTVVGAEIVFGVS 214

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   G YI  +    + P +  G++++    + L+ F 
Sbjct: 215 GSSGGL--GWYINNARYFLNPPAIFAGLVVISLLGILLDTFF 254


>gi|168186541|ref|ZP_02621176.1| putative taurine ABC transporter, permease protein [Clostridium
           botulinum C str. Eklund]
 gi|169295451|gb|EDS77584.1| putative taurine ABC transporter, permease protein [Clostridium
           botulinum C str. Eklund]
          Length = 253

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 86/239 (35%), Gaps = 16/239 (6%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLI 394
                I  + ++ G         + +     T+  +L +I           ++ RV++ +
Sbjct: 10  RRAFTILLWLLIWGAVYHYINNQVLFPSPRETFDALLNLIVKKYFWITVFSSVSRVLIGL 69

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           + + ++ + +G++ G   ++   + PF   + A P      L +      +++       
Sbjct: 70  LFSIVLGVILGLFSGMNVYLEEILMPFISSIKATPVMSIIILALVWFKASNVS-----IF 124

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             I      I  N + G  +   +  ++A+ +++      + I +P I  Y V+G +   
Sbjct: 125 TTILICFPIIYTNAVEGIKSTDLNLLQMANVYNVKKIYIVKDIYIPTIKSYVVSGILMCL 184

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G A+  S+ SEV S          +G  I  S       E+    +++    L      
Sbjct: 185 GLAFKVSVASEVLSTPKYS-----IGVNILNSKAMLETEELFAWTIVVIILSLLFELIF 238



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 91/230 (39%), Gaps = 9/230 (3%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F +L ++L+ G +   ++       PR+  D +   +           +  R+L  ++ S
Sbjct: 13  FTILLWLLIWGAVYHYINNQVLFPSPRETFDALLNLIVKKYFWITVFSSVSRVLIGLLFS 72

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++   +    +  +  L  +L+P +  +++ P++  +   +V+F              +I
Sbjct: 73  IVLGVILGLFSGMNVYLEEILMPFISSIKATPVMSIIILALVWFKASN---------VSI 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F         +  +  + + +   +L +++  + +        + +P     +V  ++M 
Sbjct: 124 FTTILICFPIIYTNAVEGIKSTDLNLLQMANVYNVKKIYIVKDIYIPTIKSYVVSGILMC 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +   +   VASE++      I +  + S   L  +E     I+  +L++L
Sbjct: 184 LGLAFKVSVASEVLSTPKYSIGVNILNSKAMLETEELFAWTIVVIILSLL 233


>gi|54302366|ref|YP_132359.1| putative ABC transporter permease protein [Photobacterium profundum
           SS9]
 gi|46915788|emb|CAG22559.1| putative ABC transporter permease protein [Photobacterium profundum
           SS9]
          Length = 292

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +A  T   ++  +++ L     +A        L   L+PIL   Q+IP+       +
Sbjct: 94  LLSHAWVTASEVILGLLLGLSMGLFFALQMLLFNPLRRWLLPILIASQAIPVFAIAPILM 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   F + T          Y  L + P    +++++   S WQ  
Sbjct: 154 LWLGYGIASKIVMAALIIFFPVTTCC--------YDGLRHTPTGYLDLAKTMGASKWQLL 205

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P L   + +++      VVA    VVG+ V    G+G  +  A     +  
Sbjct: 206 RHVRLPAALPALASGIRVAV------VVAPIGAVVGEWVGSSEGLGYLMLQANARMMIDE 259

Query: 241 ILYAMLTML---GVIFLYDQLLFRPMIVWSNK 269
           +  A+L +      ++    LL +  I W +K
Sbjct: 260 MFAALLILATFSITLYFAADLLLKRAIPWQSK 291



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 129 LRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFF----PVTTCCYDGLR 184

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  R++ LP   P   +G   A   A   ++V E        
Sbjct: 185 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAVVVAPIGAVVGEWVG----- 239

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   +LI+  F + L
Sbjct: 240 -SSEGLGYLMLQANARMMIDEMFAALLILATFSITL 274


>gi|317046652|ref|YP_004114300.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316948269|gb|ADU67744.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 267

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 6/246 (2%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
                  F Q       + +L + W  +V  + +         +V     Q+   +    
Sbjct: 5   PLAAQRKFQQWLFPALFAIVLLLLWQFLVTTLKVPAFLVPSPLVVAQSLVQNFPTLFMSL 64

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+   V+  ++A +I   V   +     I S + P+   L   P     PL++  V  
Sbjct: 65  LYTLKITVISFVVAIVIGSIVAFLLVQNRFIESALFPYIVFLQVTPIVAIAPLIIIWVKD 124

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++  +  +L+      + I+ N   G  +            H +  +    + +P   
Sbjct: 125 TTMSLVVCATLM----AVFPIISNTTQGLRSVSPGLLSYFKLNHASRLQILLRLRIPSAL 180

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY+      + G +   ++V+E  +        TGL   I ++  + + P +   +L++ 
Sbjct: 181 PYFFGALRISSGLSLIGAVVAEFVAG--TGGTDTGLAYQILQAGYQLNIPLMFAALLLIS 238

Query: 564 CFVLAL 569
                L
Sbjct: 239 LAGFLL 244



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 96/267 (35%), Gaps = 17/267 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYA 65
           P  ++R F        F +V+ ++   L    +      P  +V    +  +  +L    
Sbjct: 5   PLAAQRKFQQWLFPALFAIVLLLLWQFLVTTLKVPAFLVPSPLVVAQSLVQNFPTLFMSL 64

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T    + + V++++   + A L  ++R +   L P +  +Q  PI+      +++  +
Sbjct: 65  LYTLKITVISFVVAIVIGSIVAFLLVQNRFIESALFPYIVFLQVTPIVAIAPLIIIWVKD 124

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                V+ A L A+F I +        +  Q L ++   L    +    S  Q    L +
Sbjct: 125 TTMSLVVCATLMAVFPIIS--------NTTQGLRSVSPGLLSYFKLNHASRLQILLRLRI 176

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P     + +S        V +E +          G+   I  A  + ++  +  A+
Sbjct: 177 PSALPYFFGALRISSGLSLIGAVVAEFVAGTGGTDT--GLAYQILQAGYQLNIPLMFAAL 234

Query: 246 LTMLGVIFLY----DQLLFRPMIVWSN 268
           L +    FL       L  R +  W  
Sbjct: 235 LLISLAGFLLFALMSWLTRRVLAAWHE 261


>gi|188583007|ref|YP_001926452.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179346505|gb|ACB81917.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 177

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 57/179 (31%), Gaps = 12/179 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G    I   I+       + PA   FPL +       L+       +  F     +LFN
Sbjct: 8   VGSSQRIYRSIEFLIDFFRSTPATALFPLFMIIFGLGELSK----IAVAAFSAFLIVLFN 63

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V  G           A     +  R +R + +    P    G  TA   A    IV+E+ 
Sbjct: 64  VAYGVMNARPTRMLAAQVMGASRLRIFRDVTIYESLPQTFIGVRTAVSLALVVIIVAEMF 123

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTR 583
                     GLG  I +S      P +   +L+      A N  L+     L  +  R
Sbjct: 124 IGSD-----NGLGKRIIDSQITFDMPGLYGTILLTGALGYAFNLALFALESRLVHWAGR 177



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 67/183 (36%), Gaps = 16/183 (8%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S+R+   +  ++D  +S P        ++ F           EL+ I     S    
Sbjct: 8   VGSSQRIYRSIEFLIDFFRSTPATALFPLFMIIFGLG--------ELSKIAVAAFSAFLI 59

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           + F++   + N        ++    S  + F  + +  S+P     +  ++S     ++ 
Sbjct: 60  VLFNVAYGVMNARPTRMLAAQVMGASRLRIFRDVTIYESLPQTFIGVRTAVSLALVVIIV 119

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
           +EM +  D      G+G  I  +    D+  +   +L    + + ++  LF     ++ W
Sbjct: 120 AEMFIGSDN-----GLGKRIIDSQITFDMPGLYGTILLTGALGYAFNLALFALESRLVHW 174

Query: 267 SNK 269
           + +
Sbjct: 175 AGR 177


>gi|77456368|ref|YP_345873.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77380371|gb|ABA71884.1| putative ABC transport system, permease [Pseudomonas fluorescens
           Pf0-1]
          Length = 288

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 93/239 (38%), Gaps = 10/239 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++  ++  + +              +   L    L      + + ++   +I ++
Sbjct: 45  LILLAVLWEVVARVQNNDLLLPSFLQTSHALYDGLLSGELLGKVWISLVVLIKGYLIGIV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 105 LAFALTTLAVSTQVGRDLLSTLTSMFNPLPAIALLPLALLWFGLG--------QNSLIFV 156

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +   L    R++ L G +   ++ +P ++P ++  + +  +
Sbjct: 157 LVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGMRFVLFILIPAALPSILAGLKIGWA 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F
Sbjct: 217 FAWRTLIAAELVFGATS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVENLVF 273



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 85/268 (31%), Gaps = 13/268 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG----VAIGIAWQSIGYIVNHFTYQDV 376
             +                +  +L + W  V       + +    Q+   + +     ++
Sbjct: 25  RELPLGQRLWQQGWLRKSVILILLAVLWEVVARVQNNDLLLPSFLQTSHALYDGLLSGEL 84

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  +W+  + + +     +I  ++   +             +     +    PA    PL
Sbjct: 85  LGKVWISLVVLIK---GYLIGIVLAFALTTLAVSTQVGRDLLSTLTSMFNPLPAIALLPL 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  AG        +    ++ + G R+  +
Sbjct: 142 ALLWFGLGQNS----LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGMRFVLF 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  + G       AW   I +E+           GLG YI ++  +    +V 
Sbjct: 198 ILIPAALPSILAGLKIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTDKVF 255

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+ ++    L +   ++  L     + 
Sbjct: 256 AGLAVVILIGLLVENLVFDTLERVTVKR 283


>gi|329928634|ref|ZP_08282488.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328937597|gb|EGG34012.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 252

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 77/230 (33%), Gaps = 15/230 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P +  +L F+ V     + +  I+   +P               L Q+   T    L 
Sbjct: 9   VWPPVAAVLFFLTVWQA-AVSVFDIEPYILPAPTAIGHEAATGASGLFQHTLATLQLTLV 67

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I      V +        L   L P+L + Q++P +      +++F      KVI  
Sbjct: 68  GFMIGTAIGLVISLALHLVPFLKTALYPLLILSQNVPTIALAPLLMIWFGFGMLPKVIVI 127

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F +  + +          L    R +    +    + WQ F  L +P ++P +  
Sbjct: 128 TLVCFFPVAVAAL--------DGLARTDRTMMNYMQMAGATSWQIFTKLELPHALPSIFS 179

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            + ++ +      V  E I          GIG Y+ L         +  A
Sbjct: 180 GIRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 223



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 64/229 (27%), Gaps = 10/229 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
            +  +             W   V    I          + H        +      T+  
Sbjct: 5   WWSSVWPPVAAVLFFLTVWQAAVSVFDIEPYILPAPTAIGHEAATGASGLFQHTLATLQL 64

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            +V  +I + I + + + +   P + + + P   L    P     PL++    +      
Sbjct: 65  TLVGFMIGTAIGLVISLALHLVPFLKTALYPLLILSQNVPTIALAPLLMIWFGFG----M 120

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   +++     + +    + G +               T W+ +  + LP   P   +G
Sbjct: 121 LPKVIVITLVCFFPVAVAALDGLARTDRTMMNYMQMAGATSWQIFTKLELPHALPSIFSG 180

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
              A   +   +++ E            G+G Y+           V + 
Sbjct: 181 IRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 223


>gi|315644908|ref|ZP_07898037.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315279850|gb|EFU43151.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 251

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 15/230 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P +  +L F+LV     + +  I++  +P               L Q+   T    L 
Sbjct: 8   VWPPVVAVLFFLLVWQA-AVSIFDIEKFILPAPTAIGSEAVTGAAGLFQHTLATLQLTLI 66

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I      V +        L   L P+L + Q++P +      +++F      KVI  
Sbjct: 67  GFIIGTAIGLVISLALHMVPFLKTALYPLLILSQNVPTIALAPLLMIWFGFGMLPKVIVI 126

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F +  + +          L    R +    +    + WQ F  L +P ++P +  
Sbjct: 127 TLVCFFPVAVAAL--------DGLARTDRTMMNYMQMAGATSWQIFTKLELPHALPSIFS 178

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            + ++ +      V  E I          GIG Y+ L         +  A
Sbjct: 179 GIRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 222



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 64/231 (27%), Gaps = 10/231 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
              +  +           + W   V    I          +          +      T+
Sbjct: 2   RSWWSSVWPPVVAVLFFLLVWQAAVSIFDIEKFILPAPTAIGSEAVTGAAGLFQHTLATL 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              ++  II + I + + + +   P + + + P   L    P     PL++    +    
Sbjct: 62  QLTLIGFIIGTAIGLVISLALHMVPFLKTALYPLLILSQNVPTIALAPLLMIWFGFG--- 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L   +++     + +    + G +               T W+ +  + LP   P   
Sbjct: 119 -MLPKVIVITLVCFFPVAVAALDGLARTDRTMMNYMQMAGATSWQIFTKLELPHALPSIF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +G   A   +   +++ E            G+G Y+           V + 
Sbjct: 178 SGIRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 222


>gi|83308739|emb|CAJ01649.1| abc transporter permease protein, similar to blr6193 of
           Bradyrhizobium japonicum [Methylocapsa acidiphila]
          Length = 246

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 101/241 (41%), Gaps = 14/241 (5%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +  G +    P  ++ ++       +L    + T LR++++  +++           + +
Sbjct: 20  VFAGPRALPAPLAVLAVIDAEARSGALFFNLAATLLRVVASFTLAMALGTALGLAMGRHK 79

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +     P L I+ ++P L  +    ++            E AAI A+  +++   T ++
Sbjct: 80  PVDRFCDPWLIILLNLPALVVIVLAYIWIGLN--------ETAAIGAVALNKLPIATATV 131

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            +    +   L+E++R F +    +  ++ +P   P L   M   +S  W  V+  E++ 
Sbjct: 132 REGARALDASLDEMARVFAMPLGVRVRHVLLPQLAPYLAAAMRSGLSLVWKVVLVVELLG 191

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
             +      G+G  I +A +  D+  +L   L  +G++   +  + +P+    +++R  R
Sbjct: 192 RSN------GVGFEIGVAFQLFDVTKLLAYALPFVGLMLAIETFIVQPIERHVSRWRPGR 245

Query: 275 T 275
           T
Sbjct: 246 T 246



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +    T+ RVV    +A  +   +G+ +G    +     P+  +L   PA V   L  
Sbjct: 46  LFFNLAATLLRVVASFTLAMALGTALGLAMGRHKPVDRFCDPWLIILLNLPALVVIVLAY 105

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +          ++L  +          V  GA A      E+A  F +      R+++
Sbjct: 106 IWIGLNETAAIGAVALNKLPIA----TATVREGARALDASLDEMARVFAMPLGVRVRHVL 161

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP + PY      +     W   +V E+        R+ G+G  I  + +     +++  
Sbjct: 162 LPQLAPYLAAAMRSGLSLVWKVVLVVELLG------RSNGVGFEIGVAFQLFDVTKLLAY 215

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583
            L     +LA+  F+  P+  + +R
Sbjct: 216 ALPFVGLMLAIETFIVQPIERHVSR 240


>gi|326799969|ref|YP_004317788.1| glycine/betaine ABC transporter periplasmic protein
           [Sphingobacterium sp. 21]
 gi|326550733|gb|ADZ79118.1| ABC-type glycine betaine transport, periplasmic subunit
           [Sphingobacterium sp. 21]
          Length = 523

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 73/186 (39%), Gaps = 15/186 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +       +++I++L       L A++R L  +++  + I+Q+IP +  L F +
Sbjct: 19  LLVQTLQHIGLTFISLLIAVLLGLPLGILIARNRNLSGIVLGTVGILQTIPSIALLGFLI 78

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                            AI A+F   +  +  + Y  +  I   ++E + +  L+  Q  
Sbjct: 79  PVLGIG--------AKPAIVALFLYALLPIIRNTYTGITGINPTVKEAAIALGLNKQQLL 130

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +MP ++  +  +        V +  +    + I   G+G +I   I   +   
Sbjct: 131 LQVELPLAMPVILAGIRTA-------TVINVGVATLASYIAAGGLGEFIFGGISLNNTNM 183

Query: 241 ILYAML 246
           IL   +
Sbjct: 184 ILGGAI 189



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 11/193 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + HF +Q    ++      +    + ++IA ++ +P+GI I    ++S  +     +L  
Sbjct: 8   LWHFMWQQADKLLVQTLQHIGLTFISLLIAVLLGLPLGILIARNRNLSGIVLGTVGILQT 67

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+      ++  +            + +       I+ N   G +      KE A +  
Sbjct: 68  IPSIALLGFLIPVLGIGAK----PAIVALFLYALLPIIRNTYTGITGINPTVKEAAIALG 123

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +    + LP   P  + G  TA       + ++   + G       GLG +I    
Sbjct: 124 LNKQQLLLQVELPLAMPVILAGIRTATVINVGVATLASYIAAG-------GLGEFIFGGI 176

Query: 548 EKGSFPEVVLGVL 560
              +   ++ G +
Sbjct: 177 SLNNTNMILGGAI 189


>gi|302548572|ref|ZP_07300914.1| putative ABC transporter, permease protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302466190|gb|EFL29283.1| putative ABC transporter, permease protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 276

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 13/202 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+       ++     + +G  I     I     P+       P     PL V    + 
Sbjct: 79  VTVLESGYGFLLGVAAALVLGTAISQVRLIERTFMPYVVAFQTVPKVALAPLFVVWFGFG 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  +++    + + +L NVI G  +   D  ++   F     + +R + LP   P
Sbjct: 139 MTSKVVMAAVI----SFFPVLVNVIEGLRSADADRIQMLMVFGAGRIQVFRMVRLPSALP 194

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +   G       +   ++V E            GLG  + ++        +   ++++  
Sbjct: 195 FIFAGLDIGIVFSILGAVVGEFIG------AKEGLGYLLLQTNYNFDIAGMFAVLVVLSV 248

Query: 565 FVLA---LNRFLWHPLYLYGTR 583
             L    + RF    L  +   
Sbjct: 249 LGLIAHFIIRFAQKRLVFWAEE 270



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 83/234 (35%), Gaps = 17/234 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I D +   L       +   T L      ++ +    V  T  ++ R +    +
Sbjct: 54  LPRPSQIFDALRTQLADPLFWGHLKVTVLESGYGFLLGVAAALVLGTAISQVRLIERTFM 113

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +      VV+F      KV+ A + + F +          ++ + L + 
Sbjct: 114 PYVVAFQTVPKVALAPLFVVWFGFGMTSKVVMAAVISFFPVLV--------NVIEGLRSA 165

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++   F     Q F  + +P ++P +   + + +       V  E I   +    
Sbjct: 166 DADRIQMLMVFGAGRIQVFRMVRLPSALPFIFAGLDIGIVFSILGAVVGEFIGAKE---- 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNKFRL 272
             G+G  +       D+  +   ++ +  +  +     +   + ++ W+ + R+
Sbjct: 222 --GLGYLLLQTNYNFDIAGMFAVLVVLSVLGLIAHFIIRFAQKRLVFWAEENRV 273


>gi|241113195|ref|YP_002973030.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861403|gb|ACS59069.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 283

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 22/257 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            +  +L  F +  +F   + L+A V+V+  + + L       +      ++        L
Sbjct: 35  LIEAVLSGFEALLLFVPPYGLIAIVVVLAFVAVGLRAAILAGLCLGFCLLM-------GL 87

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              + +T   +  A++IS+L  F    L ++ + L  ++ P LD+MQ++P   +L   V+
Sbjct: 88  WTASMQTLSLVTVAVLISVLIAFPIGVLCSRHKTLEAMVRPALDVMQTVPPWVYLIPAVM 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F            + AI A     +  M      +   +PR+  E+  +         W
Sbjct: 148 IFSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPREFVELGSAIGAPPSSVLW 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   L+  +          ++ S  +VV   ++   G+G+ +   +   ++   
Sbjct: 200 KIEIPLARQTLLVGLNQ-------CILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEMGLG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A L ++ V  L D+L
Sbjct: 253 LRAGLAIVAVALLLDRL 269



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 4/214 (1%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            + +S   F +P  + +      L     +  E  L       +          VV    
Sbjct: 5   ILQFSPGAFLAPSVDWLNTNLHPLFAAISYLIEAVLSGFEALLLFVPPYGLIAIVVVLAF 64

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +  ++         +  ++ +      T+  V V ++I+ +I  P+G+       + +
Sbjct: 65  VAVGLRAAILAGLCLGFCLLMGLWTASMQTLSLVTVAVLISVLIAFPIGVLCSRHKTLEA 124

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            ++P   ++   P  V+    V   S   +   +   +  I      +L       +  P
Sbjct: 125 MVRPALDVMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI----PPMLRLTTLAFNQVP 180

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +F E+ S+           I +P      + G 
Sbjct: 181 REFVELGSAIGAPPSSVLWKIEIPLARQTLLVGL 214


>gi|258404898|ref|YP_003197640.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257797125|gb|ACV68062.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 222

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 8/194 (4%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             ++L    M+ V + + IA++I +PVGI I     ++ ++   A +    P+   F L+
Sbjct: 13  QALYLTWEHMWIVGLSVGIATVIGVPVGILITKYETLAKRVINAANIFMTIPSIALFGLM 72

Query: 438 VSCVSYYHLNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +  +S +      +   + ++  +Q  I+ N        P           ++ W+  + 
Sbjct: 73  LPMLSLFGHGLGKVPAVIALVLYSQLPIIRNTYVAIKNVPPAVVNAGRGMGMSNWQLLKE 132

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G  TA       + ++     G       GLG YI +  ++     +V
Sbjct: 133 VELPIAIPVILAGLRTAAVMNIGIAAIATFVGAG-------GLGVYIQQGIDRVYDEMIV 185

Query: 557 LGVLIMCCFVLALN 570
            G +++  F + ++
Sbjct: 186 AGAILVSVFAIVVD 199



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 10/195 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                     +  ++ I+ +       L  K   L   ++   +I  +IP +      + 
Sbjct: 15  LYLTWEHMWIVGLSVGIATVIGVPVGILITKYETLAKRVINAANIFMTIPSIALFGLMLP 74

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                  G  +G   A I  +  SQ+  +  + Y ++ N+P  +    R   +S WQ   
Sbjct: 75  MLSLFGHG--LGKVPAVIALVLYSQL-PIIRNTYVAIKNVPPAVVNAGRGMGMSNWQLLK 131

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  +        V +  I    T +   G+G YI   I       I
Sbjct: 132 EVELPIAIPVILAGLRTA-------AVMNIGIAAIATFVGAGGLGVYIQQGIDRVYDEMI 184

Query: 242 LYAMLTMLGVIFLYD 256
           +   + +     + D
Sbjct: 185 VAGAILVSVFAIVVD 199


>gi|150389092|ref|YP_001319141.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
 gi|149948954|gb|ABR47482.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
          Length = 273

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 92/239 (38%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+L+  ++  L       T+ P  I  ++   +   S+ ++ + +    + A VI  
Sbjct: 37  LVGFILLWELVVTLRWIDPFFTSKPSAIFALITRLVQDGSIFKHTAVSVTEAVIAFVIGT 96

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   V AT    S  +  VL P L ++ ++P +      +++      G         I 
Sbjct: 97  LLGTVLATALWWSEFVARVLDPYLVVLHALPKIALGPIIIIWAGAGMRG--------IIV 148

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                 +     S Y     +  +  ++ ++F  +  Q F  +  P S+P ++  M +++
Sbjct: 149 TALMISLVVTILSTYNGYKEVDEEKVKMLQTFGATKLQIFQKVIFPASIPTMINTMKINI 208

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W  V+  E +V         G+G  I    +   L  ++  ++ +     +  QL+
Sbjct: 209 GMTWVGVIVGEFLV------SKAGLGYLIVYGGQVFRLDIVMAGVIILAIATAIMYQLI 261



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +++   V+  +I +++   +   + +   ++  + P+  +L A P     P+
Sbjct: 75  GSIFKHTAVSVTEAVIAFVIGTLLGTVLATALWWSEFVARVLDPYLVVLHALPKIALGPI 134

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++             + +  +  +    + +   G      +  ++  +F  T  + ++ 
Sbjct: 135 IIIWAGAGMRG----IIVTALMISLVVTILSTYNGYKEVDEEKVKMLQTFGATKLQIFQK 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P  +       G  W   IV E        +   GLG  I    +      V+
Sbjct: 191 VIFPASIPTMINTMKINIGMTWVGVIVGEFL------VSKAGLGYLIVYGGQVFRLDIVM 244

Query: 557 LGVLIMCCFVLALNRFL 573
            GV+I+      + + +
Sbjct: 245 AGVIILAIATAIMYQLI 261


>gi|49183395|ref|YP_026647.1| ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|49476908|ref|YP_034707.1| ABC transporter permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49177322|gb|AAT52698.1| ABC transporter, permease protein, putative [Bacillus anthracis
           str. Sterne]
 gi|49328464|gb|AAT59110.1| ABC transporter, permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 265

 Score = 83.4 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 70  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 129 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 186 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 238

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 239 VTLCLYFI 246



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 24  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 83

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 84  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 143 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 196 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 246


>gi|331001952|ref|ZP_08325472.1| hypothetical protein HMPREF0491_00334 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411748|gb|EGG91153.1| hypothetical protein HMPREF0491_00334 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 512

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 66/179 (36%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F  +     ++ ++   + + +++ + +IP +  L F + +               AI 
Sbjct: 36  VFGGIVGIFISEFQKSAKLTLGVINFLYTIPSISMLGFLIPFSGIGN--------ATAII 87

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+    +  M  + Y  + N+   + E ++    +  Q  + + +P +MP ++  +    
Sbjct: 88  ALTIYALLPMVRNTYTGMINVDAGILEAAKGMGSTKKQILFRVQIPLAMPVIISGIR--- 144

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V  +  +    + I   G+G  I   I   +    +   L +  +    D +L
Sbjct: 145 ----NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNAAMTITGSLLIAVLALAVDFIL 199



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 11/175 (6%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +    VGI+I      +         L   P+      ++      +    + L++  + 
Sbjct: 36  VFGGIVGIFISEFQKSAKLTLGVINFLYTIPSISMLGFLIPFSGIGNATAIIALTIYALL 95

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++ N   G         E A     T  +    + +P   P  ++G         
Sbjct: 96  ----PMVRNTYTGMINVDAGILEAAKGMGSTKKQILFRVQIPLAMPVIISGIR------- 144

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           N   ++   +     +   GLG  I       +    + G L++    LA++  L
Sbjct: 145 NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNAAMTITGSLLIAVLALAVDFIL 199


>gi|294497654|ref|YP_003561354.1| ABC transporter permease [Bacillus megaterium QM B1551]
 gi|294347591|gb|ADE67920.1| ABC transporter, permease protein [Bacillus megaterium QM B1551]
          Length = 247

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 78/237 (32%), Gaps = 19/237 (8%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---------TMFRVVV 392
                    V+   A  I  + + Y     T   +L  +W   +         T+  VV+
Sbjct: 3   KYGASVILVVILLAAWEIGARIVNYPFILPTPTGILTKLWDLRMDLLFKHLPATLSIVVI 62

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++I+ ++ + + +W+ + P I     P        P     P+ V    Y         
Sbjct: 63  GLLISVVLGVLLAVWMNWSPLIERAFYPLIIASQMIPTIAIAPVFVLWFGYS----IWSK 118

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++ +  T + I  +   G  +   + KE+  +   T    +  + +P   P++ +G   
Sbjct: 119 VIVTVLITFFPITVSTFDGLRSTNKELKELMLTMGATKKDIFFKLNIPSALPHFYSGLKV 178

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   +   + + E            GLG +      +     V   ++I+    +  
Sbjct: 179 AVTFSIIGAAIGEWLG------AQAGLGYFSRRMMTQFDAAGVFAPIVILSALGILF 229



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 94/238 (39%), Gaps = 19/238 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPI-----TLDVHSLPQYASRTTLRMLSAMV 77
            + +LV+ ++     G +    P  +     I      L +  L ++   T   ++  ++
Sbjct: 6   ASVILVVILLAAWEIGARIVNYPFILPTPTGILTKLWDLRMDLLFKHLPATLSIVVIGLL 65

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS++   + A     S  +     P++   Q IP +      V++F          +  +
Sbjct: 66  ISVVLGVLLAVWMNWSPLIERAFYPLIIASQMIPTIAIAPVFVLWFGY--------SIWS 117

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +        + +T S +  L +  ++L+E+  +   +    F+ L +P ++P     + 
Sbjct: 118 KVIVTVLITFFPITVSTFDGLRSTNKELKELMLTMGATKKDIFFKLNIPSALPHFYSGLK 177

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++++   F ++ +    +G+ +    G+G +    + + D   +   ++ +  +  L+
Sbjct: 178 VAVT---FSIIGA---AIGEWLGAQAGLGYFSRRMMTQFDAAGVFAPIVILSALGILF 229


>gi|329946409|ref|ZP_08293976.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527385|gb|EGF54383.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 260

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 12/255 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R      +           +  + W+                         D   + W  
Sbjct: 5   RPSSLTRWRARLLWWAGIGLAVLIWYWAALNQPEYALPGPETTWHAFLGLIDDGDLGWTL 64

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R V+ + ++ +I +P G  +G    +   +  + Q+L A P     P+V+  V  
Sbjct: 65  WLTLSRAVIGLGLSCLIGVPTGWALGTWTWLRELLDSWVQVLMAVP-----PIVLVVVGM 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             L P   + +L++      +L  ++         D  E+A+ F  +     R I+LP +
Sbjct: 120 IWLGPTAGVVILVVTLVTLPLLVASMRDAVLNVDGDLLEMATVFSKSHPWTIRRIVLPAV 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++    A G +   ++++E+          TGLGA + ++       +V    +IM
Sbjct: 180 APPVLSALTVAVGQSVRVTVMAELLG------TPTGLGAEVQQARTNLETADVFALSVIM 233

Query: 563 CCFVLALNRFLWHPL 577
               L L   +  PL
Sbjct: 234 AALTLLLELCVLRPL 248



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 81/245 (33%), Gaps = 14/245 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            +  +   ++I     L         P          +D   L      T  R +  + +
Sbjct: 18  WWAGIGLAVLIWYWAALNQPEYALPGPETTWHAFLGLIDDGDLGWTLWLTLSRAVIGLGL 77

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S L              L  +L   + ++ ++P +  +   +++        ++   L  
Sbjct: 78  SCLIGVPTGWALGTWTWLRELLDSWVQVLMAVPPIVLVVVGMIWLGPTAGVVILVVTLVT 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +          +  SM  ++ N+  DL E++  F  S       + +P   P ++  + +
Sbjct: 138 LPL--------LVASMRDAVLNVDGDLLEMATVFSKSHPWTIRRIVLPAVAPPVLSALTV 189

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++       V +E++          G+G+ +  A    +   +    + M  +  L +  
Sbjct: 190 AVGQSVRVTVMAELLG------TPTGLGAEVQQARTNLETADVFALSVIMAALTLLLELC 243

Query: 259 LFRPM 263
           + RP+
Sbjct: 244 VLRPL 248


>gi|320102189|ref|YP_004177780.1| binding-protein-dependent transport systems inner membrane
           component [Isosphaera pallida ATCC 43644]
 gi|319749471|gb|ADV61231.1| binding-protein-dependent transport systems inner membrane
           component [Isosphaera pallida ATCC 43644]
          Length = 308

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 85/241 (35%), Gaps = 11/241 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R ++P++  L+  VL      ++   I    VPR          D  SL   A  T    
Sbjct: 36  RTVWPSLTVLILVVLAWD-RAVVWGEIPSYLVPRPEAVARAAWNDRTSLASAAGLTAQAA 94

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    +SL+   + A   A    +     P    +Q++PI+          +NLYPG   
Sbjct: 95  LCGFALSLVVGSLTALAFATWSWVRRSCYPYAIFLQTVPIVAIAPL-----INLYPGPGF 149

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   + +   +   ++ +       L  +P +  E+ R +    W   W L +P ++P L
Sbjct: 150 G---SVVLLSWMISLFPIVTGGTTGLTRVPPEWLELFRLYGAGRWTILWKLRIPNAVPHL 206

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V     S+       V  EM           G+G +I    +  +        LT  G+ 
Sbjct: 207 VTAAKTSVGLAVIGAVVGEMFCASSKSGY--GLGYWIQATSRTLEADRAFAYFLTSTGLA 264

Query: 253 F 253
            
Sbjct: 265 L 265



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 21/254 (8%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY-------------IVNHFTYQDVLYV 379
           +   N RV++++   W  +   + + +AW                   V    + D   +
Sbjct: 24  RTWWNGRVTHLVRTVWPSLTVLILVVLAWDRAVVWGEIPSYLVPRPEAVARAAWNDRTSL 83

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                +T    +    ++ ++     +       +     P+A  L   P     PL+  
Sbjct: 84  ASAAGLTAQAALCGFALSLVVGSLTALAFATWSWVRRSCYPYAIFLQTVPIVAIAPLINL 143

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +    + LL    + + I+     G +  P ++ E+   +    W     + +
Sbjct: 144 YPGPGFGS----VVLLSWMISLFPIVTGGTTGLTRVPPEWLELFRLYGAGRWTILWKLRI 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P+ VT A T+ G A   ++V E+  +        GLG +I  ++            
Sbjct: 200 PNAVPHLVTAAKTSVGLAVIGAVVGEM--FCASSKSGYGLGYWIQATSRTLEADRAFA-- 255

Query: 560 LIMCCFVLALNRFL 573
             +    LAL+ FL
Sbjct: 256 YFLTSTGLALSIFL 269


>gi|226307497|ref|YP_002767457.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226186614|dbj|BAH34718.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 259

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +A  T    L    +SL+  ++ A +   S  L   LVP+  + Q++PI+      +++
Sbjct: 59  GHAWSTLQVTLVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIW 118

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F            L  +  I  +  + MT  + +      R+   + RS   + WQ+F Y
Sbjct: 119 FGFGL--------LPKVLVIALATFFPMTIGLIEGFAAADREAGALLRSMGSTRWQEFRY 170

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P     + + ++      V SE +          G+G Y++          +L
Sbjct: 171 VRLPSAIPRFFTALRIGITYAVVGAVFSEYVG------ATSGLGIYMSTQKNSFRTDLVL 224

Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWS 267
            A+L    +      L F   R +  W+
Sbjct: 225 AAVLVTALISVTLYLLTFAIERIVAPWA 252



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +V   ++ ++   + + + F P +S  + P   +    P     PL++    +  
Sbjct: 64  TLQVTLVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIWFGFGL 123

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       L++   T + +   +I G +A   +   +  S   T W+ +RY+ LP   P 
Sbjct: 124 LPK----VLVIALATFFPMTIGLIEGFAAADREAGALLRSMGSTRWQEFRYVRLPSAIPR 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + T        A   ++ SE          T+GLG Y++          V+  VL+    
Sbjct: 180 FFTALRIGITYAVVGAVFSEYVG------ATSGLGIYMSTQKNSFRTDLVLAAVLVTALI 233

Query: 566 VLAL 569
            + L
Sbjct: 234 SVTL 237


>gi|223039087|ref|ZP_03609378.1| abcb protein [Campylobacter rectus RM3267]
 gi|222879726|gb|EEF14816.1| abcb protein [Campylobacter rectus RM3267]
          Length = 265

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 79/193 (40%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+ R +V +  A  I I +G+  G     ++ ++P    L + P  ++  L +    + 
Sbjct: 74  ITLVRSLVGVGTACAIGITLGLVAGAYRSFAAFLKPVITTLLSMPPIIWIVLAIFWFGFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + +    + + ++  T      + + G  +   + KE+  ++ +   +  R++ +P +  
Sbjct: 134 NASTVFTIIITVLPLTF----ASSMVGMMSVSEELKEMFDAYKLGVCKKIRHLYVPHLTS 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + ++    A G      I+ E+           G+GA IA +       EV+  V++   
Sbjct: 190 HIISSLSVAVGMGVKIVIMGELLG------ANDGMGAKIASARVMLDTTEVMAYVVLTIA 243

Query: 565 FVLALNRFLWHPL 577
            ++     +  PL
Sbjct: 244 IIMLFEYLVIEPL 256



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 84/196 (42%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R L  +  +         +A   R     L P++  + S+P + ++   + +F    
Sbjct: 75  TLVRSLVGVGTACAIGITLGLVAGAYRSFAAFLKPVITTLLSMPPIIWIVLAIFWFG--- 131

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    + +F I  + +     S    + ++  +L+E+  +++L   +K  +L VP 
Sbjct: 132 -----FGNASTVFTIIITVLPLTFASSMVGMMSVSEELKEMFDAYKLGVCKKIRHLYVPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ +++  G   V+  E++   D      G+G+ IA A    D   ++  ++ 
Sbjct: 187 LTSHIISSLSVAVGMGVKIVIMGELLGAND------GMGAKIASARVMLDTTEVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
            + +I L++ L+  P+
Sbjct: 241 TIAIIMLFEYLVIEPL 256


>gi|302339637|ref|YP_003804843.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636822|gb|ADK82249.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 250

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 99/238 (41%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +++    + +++       P  ++  +    D  +  ++ + +  R+  + + SL+
Sbjct: 16  VVLLLIIWEAASSIVNADIILPTPFAVLRRLIAIGDRRTFFRHIAASGERVAVSFLFSLI 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    +  S      L P +  M+++P++  +   +++F          + +  IFA
Sbjct: 76  VGILLGIGSGLSSAFRAFLSPFVHTMRTVPVMAVILIAILWF---------PSTVVPIFA 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +  ++ + +  I   L E++  FR+   ++   + +P  +P ++    +++ 
Sbjct: 127 AVLMALPVVIGAVERGILEIDSKLVEMAHIFRVPPVERLRRVIIPQLVPSILTAAHLTLG 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  VVA E+       IP  G+G+ + LA    +  A+    + ++    L   LL
Sbjct: 187 LCWKVVVAGEIFT-----IPRSGVGAQMQLAQLSLESEAVFAWTVVVVISAALSQALL 239



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQS-IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +L I W      V   I   +    +       D          +  RV V  + + I+ 
Sbjct: 18  LLLIIWEAASSIVNADIILPTPFAVLRRLIAIGDRRTFFRHIAASGERVAVSFLFSLIVG 77

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I +GI  G      + + PF   +   P      + +         P+  + +       
Sbjct: 78  ILLGIGSGLSSAFRAFLSPFVHTMRTVPVMAVILIAILWF------PSTVVPIFAAVLMA 131

Query: 462 WYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             ++   +  G     +   E+A  F +      R +I+P + P  +T A    G  W  
Sbjct: 132 LPVVIGAVERGILEIDSKLVEMAHIFRVPPVERLRRVIIPQLVPSILTAAHLTLGLCWKV 191

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +  E+       +  +G+GA +  +        V    +++  
Sbjct: 192 VVAGEIF-----TIPRSGVGAQMQLAQLSLESEAVFAWTVVVVI 230


>gi|298290231|ref|YP_003692170.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296926742|gb|ADH87551.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 291

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++  V   +I S I I + +  G        I P+   L   P     P+V++ + +
Sbjct: 78  GVTLWEAVAGFVIGSAIGIGLAVAAGLNESFRRYISPYIIALQVTPRIALAPIVIAWLGF 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +    +      +    N + G      D  E+  S      + +  ++LP   
Sbjct: 138 G----MMPKIAIGALICFFPPFINTLTGLLNVDEDANEMFRSLGARKRQIFFSLMLPNAM 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G  TA   A   +IV E  S       + G+G  +   T   +       ++I+ 
Sbjct: 194 PIIMAGLKTAISLALIGAIVGEFIS------ASEGMGVLMQRYTFALNMASSFAVLVILT 247

Query: 564 CFVLAL 569
                L
Sbjct: 248 AMGYVL 253



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 18/239 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   ++  +   T    ++  VI        A  A  +      + P +  +Q  P +  
Sbjct: 68  LYQGTVWFHLGVTLWEAVAGFVIGSAIGIGLAVAAGLNESFRRYISPYIIALQVTPRIAL 127

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + +       K+    L   F  F         +    L N+  D  E+ RS    
Sbjct: 128 APIVIAWLGFGMMPKIAIGALICFFPPF--------INTLTGLLNVDEDANEMFRSLGAR 179

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL---A 232
             Q F+ L +P +MP ++  +  ++S      +  E I   +      G+G  +     A
Sbjct: 180 KRQIFFSLMLPNAMPIIMAGLKTAISLALIGAIVGEFISASE------GMGVLMQRYTFA 233

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           +      A+L  +  M  V+FL  +     ++ W +  R+        A +W     R+
Sbjct: 234 LNMASSFAVLVILTAMGYVLFLLMEWADNWLVYWRHDARM-TAISRKKARAWGGVTGRR 291


>gi|316933359|ref|YP_004108341.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315601073|gb|ADU43608.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 278

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 86/265 (32%), Gaps = 15/265 (5%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +L      ++    +             +  +  F V    A G             T +
Sbjct: 10  RLIIRESAVQTAISKATTARLRRATELAIGPVLLFGVWWLAARGGWVNKDLLPSPVDTLR 69

Query: 375 DVLYVIWLGCIT------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           D    IW G +T      M RV   I IA +  +PVGI +G +  +   ++       + 
Sbjct: 70  DTTVAIWSGSMTKDIWHTMVRVGYSIAIAIVAGVPVGIVLGAKAAVYRSVEFIVDFFRST 129

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           PA   FPL +       L      +          I+FNV  G           A S   
Sbjct: 130 PATAMFPLFLLLFGLGDLAKIAVAAFAAWLV----IVFNVAYGVMNARQTRILAARSMGA 185

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  R +R +I     P    G  TA   A    IV+E+         T G+G  I ++  
Sbjct: 186 SSLRIFRDVIFFETLPQTFIGLRTAVSLALVVIIVAEMFIGA-----TDGMGHRIIDAQI 240

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
             S  ++   +LI       LN  L
Sbjct: 241 SYSLTDMYGSILIAGALGYGLNLIL 265



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 90/251 (35%), Gaps = 14/251 (5%)

Query: 23  LAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  VL+ G+  +   G          P D +    + +   S+ +    T +R+  ++ I
Sbjct: 38  IGPVLLFGVWWLAARGGWVNKDLLPSPVDTLRDTTVAIWSGSMTKDIWHTMVRVGYSIAI 97

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++       +      +   +  I+D  +S P        ++ F      K+  A  AA
Sbjct: 98  AIVAGVPVGIVLGAKAAVYRSVEFIVDFFRSTPATAMFPLFLLLFGLGDLAKIAVAAFAA 157

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I         F++   + N  +     +RS   S  + F  +    ++P     +  
Sbjct: 158 WLVI--------VFNVAYGVMNARQTRILAARSMGASSLRIFRDVIFFETLPQTFIGLRT 209

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++S     ++ +EM +     +    I + I+ ++ +     ++   L     + L    
Sbjct: 210 AVSLALVVIIVAEMFIGATDGMGHRIIDAQISYSLTDMYGSILIAGALGYGLNLILL--F 267

Query: 259 LFRPMIVWSNK 269
           L R ++ WS K
Sbjct: 268 LERSIVHWSGK 278


>gi|158423986|ref|YP_001525278.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330875|dbj|BAF88360.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 274

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT     +   I ++  I VG W   R  +++   P+ ++  A P  V  P+    +  
Sbjct: 76  GITALETALAFAIGALGGILVGFWFARRQIVAAVFDPYVKMANALPRVVLAPIFALWLGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A    ++  +  R++  P   
Sbjct: 136 GIWSKVALGVSLVFFI----VFFNVYQGVKEVSPTVLANARMLGMSERQLLRHVYWPSAL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   T+ G A   ++V E            GLG  I ++        V  G+ ++ 
Sbjct: 192 TWMFSSLHTSVGFALVGAVVGEYLG------SAAGLGYRIHQAEGVFDVTGVFSGMFVLA 245

Query: 564 CFVLALNRFL 573
            FV+ ++  +
Sbjct: 246 VFVILIDAVV 255



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +            +  +   T L    A  I  L   +     A+ + +  V  P
Sbjct: 53  STPIAVFQRTWQDFATGVIWYHLGITALETALAFAIGALGGILVGFWFARRQIVAAVFDP 112

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +  ++P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 113 YVKMANALPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVS 164

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R   +S  Q   ++  P ++  +  ++  S+    F +V +   VVG+ +   
Sbjct: 165 PTVLANARMLGMSERQLLRHVYWPSALTWMFSSLHTSVG---FALVGA---VVGEYLGSA 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  A    D+  +   M  +   + L D ++
Sbjct: 219 AGLGYRIHQAEGVFDVTGVFSGMFVLAVFVILIDAVV 255


>gi|308234346|ref|ZP_07665083.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Atopobium vaginae DSM 15829]
 gi|328943323|ref|ZP_08240788.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
 gi|327491292|gb|EGF23066.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
          Length = 253

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +L   W   V   AI          V     +D   +   G  T+   ++ +    +
Sbjct: 18  VTLLLICIWEAAVDTGAIANFLLPSPLQVLSAMIRDKDLLCAHGITTITEAILGLFWGCV 77

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   V I +   P I + + P   +    P     PL+V  + Y      L   +L+I  
Sbjct: 78  LGFIVAILMDSSPLIHAALNPLITISQTIPTIAIAPLLVLWLGY----DLLPKVVLVIIT 133

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  +++ G ++  +    +    +   W+ + ++ LP    ++ +G   +   A  
Sbjct: 134 TFFPITISLVTGFASVDSQTINLMKIMNARPWQVFLHVKLPCALSHFFSGLSISATYAII 193

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++++E           +GLG Y+    +  S+ ++   + +     L L
Sbjct: 194 GAVIAEWLGG------ISGLGVYMIRVRKSFSYDKMFAVIFLTSALSLVL 237



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 83/251 (33%), Gaps = 15/251 (5%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
            +     +++I   +   L  + +     +    I    +P  +  +  +  D   L  +
Sbjct: 2   ELRKALPTKQIIIPVVVTLLLICIWEA-AVDTGAIANFLLPSPLQVLSAMIRDKDLLCAH 60

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T    +  +    +  F+ A L   S  +   L P++ I Q+IP +      V++  
Sbjct: 61  GITTITEAILGLFWGCVLGFIVAILMDSSPLIHAALNPLITISQTIPTIAIAPLLVLWLG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      L  +  +  +  + +T S+     ++      + +      WQ F ++ 
Sbjct: 121 YDL--------LPKVVLVIITTFFPITISLVTGFASVDSQTINLMKIMNARPWQVFLHVK 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++      + +S +      V +E +        + G+G Y+    K      +   
Sbjct: 173 LPCALSHFFSGLSISATYAIIGAVIAEWLGG------ISGLGVYMIRVRKSFSYDKMFAV 226

Query: 245 MLTMLGVIFLY 255
           +     +  + 
Sbjct: 227 IFLTSALSLVL 237


>gi|205374200|ref|ZP_03226999.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coahuilensis m4-4]
          Length = 217

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 77/196 (39%), Gaps = 10/196 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             + T+ +  A++++LL           +  L   ++ I  +M +IP +      +  F 
Sbjct: 19  TIQHTVLVGLAIIVALLIAVPLGIYLTTNDDLAETVLQIASVMLTIPSIALFGIMIPIFS 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +  G      + A  A+       +  + Y ++ N+  ++ + ++   +  +Q+ W + 
Sbjct: 79  QINQGI---GFVPAFVALVLYSQLPIIRNTYTAIKNVSPEMRDAAKGVGMKTFQRLWRVE 135

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  +       VV +  I V    I   G+G  I   I   D   I+  
Sbjct: 136 IPNAFPIIMAGIRTA-------VVLNIGIGVIAAYIGAGGLGVLITQGITRGDNYLIITG 188

Query: 245 MLTMLGVIFLYDQLLF 260
            + +  +  + D +L 
Sbjct: 189 SVAVAILAMIADGILL 204



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 8/185 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + II+A +I +P+GI++     ++  +   A ++   P+   F +++   S  +    
Sbjct: 26  VGLAIIVALLIAVPLGIYLTTNDDLAETVLQIASVMLTIPSIALFGIMIPIFSQINQGIG 85

Query: 450 LWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              + + ++  +Q  I+ N          + ++ A    +  ++    + +P  FP  + 
Sbjct: 86  FVPAFVALVLYSQLPIIRNTYTAIKNVSPEMRDAAKGVGMKTFQRLWRVEIPNAFPIIMA 145

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA        +++     G       GLG  I +   +G    ++ G + +    + 
Sbjct: 146 GIRTAVVLNIGIGVIAAYIGAG-------GLGVLITQGITRGDNYLIITGSVAVAILAMI 198

Query: 569 LNRFL 573
            +  L
Sbjct: 199 ADGIL 203


>gi|229544166|ref|ZP_04433225.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229325305|gb|EEN90981.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 254

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 61/185 (32%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V +  +++    + +G+ +           PF  +    P     P+ +    Y 
Sbjct: 62  ATVEEVGIGFLLSVAGGVMIGVIMYVSKTAEKIFYPFLVISQTIPLVAVSPVFMMWFGYS 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     +++    + I+ +   G       +  +  +   + W  +R + +P   P
Sbjct: 122 ----VWSKVAIIVLTAIFPIVISTFDGLKTVDPAYLNLFRTMGASRWDIFRKLSVPMALP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +++G   +     + + + E          T GLG +    +       V   V ++  
Sbjct: 178 QFLSGLKLSVVYCVSGAAIGEWLG------ATAGLGFFSKRMSGYLQSDAVFSAVFLLAA 231

Query: 565 FVLAL 569
           F + L
Sbjct: 232 FGMGL 236



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +    ++S+    +   +   S+    +  P L I Q+IP++      +++F
Sbjct: 59  HLPATVEEVGIGFLLSVAGGVMIGVIMYVSKTAEKIFYPFLVISQTIPLVAVSPVFMMWF 118

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 KV    L AIF         +  S +  L  +      + R+   S W  F  L
Sbjct: 119 GYSVWSKVAIIVLTAIF--------PIVISTFDGLKTVDPAYLNLFRTMGASRWDIFRKL 170

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP ++P  +  + +S+      V       +G+ +    G+G +           A+  
Sbjct: 171 SVPMALPQFLSGLKLSV------VYCVSGAAIGEWLGATAGLGFFSKRMSGYLQSDAVFS 224

Query: 244 AMLTMLGVIFLYDQLL 259
           A+  +         L+
Sbjct: 225 AVFLLAAFGMGLFLLI 240


>gi|148653247|ref|YP_001280340.1| binding-protein-dependent transport systems inner membrane
           component [Psychrobacter sp. PRwf-1]
 gi|148572331|gb|ABQ94390.1| binding-protein-dependent transport systems inner membrane
           component [Psychrobacter sp. PRwf-1]
          Length = 259

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 98/238 (41%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +L++  + +    I +  +P  +  +     D   L ++A  T    +    I L+
Sbjct: 23  LVILILLVWQLCVQFEIIPDYLLPSPLQIVQAFIEDFGLLMEHAKYTLATAIIGTTIGLI 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +FV +     S+ +  ++ P++ + Q+IP +      +++       KV+   LA  F 
Sbjct: 83  VSFVLSICMDLSKTIRDLVYPVILLNQTIPTIAIAPLLIIWLGYGITPKVVLVILAVFF- 141

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T ++     ++ R+   + +S + S +Q + +L +P +M      + +++S
Sbjct: 142 -------PITIALIDGYQSVSREHLNLFKSMKASTYQLYRHLKIPSAMGSFFTGLKVALS 194

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V +E +          G+G Y+    K  DL ++   +  +  +  L   L+
Sbjct: 195 YALISAVIAEWLGG------YHGLGVYMTRVRKSYDLDSMFAVIFLISFLTILLIALV 246



 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 85/256 (33%), Gaps = 15/256 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +  L L  +  +  ++ + W   V    I          +     +D   ++     T+ 
Sbjct: 12  KQALTLIKSHVLVILILLVWQLCVQFEIIPDYLLPSPLQIVQAFIEDFGLLMEHAKYTLA 71

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++   I  I+   + I +     I   + P   L    P     PL++  + Y     
Sbjct: 72  TAIIGTTIGLIVSFVLSICMDLSKTIRDLVYPVILLNQTIPTIAIAPLLIIWLGYG---- 127

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                +L+I    + I   +I G  +   +   +  S   + ++ +R++ +P     + T
Sbjct: 128 ITPKVVLVILAVFFPITIALIDGYQSVSREHLNLFKSMKASTYQLYRHLKIPSAMGSFFT 187

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   A  +++++E            GLG Y+    +      +   + ++    + 
Sbjct: 188 GLKVALSYALISAVIAEWLGG------YHGLGVYMTRVRKSYDLDSMFAVIFLISFLTIL 241

Query: 569 LNRFLWHPLYLYGTRC 584
           L   +      +  R 
Sbjct: 242 LIALV-----KWLERR 252


>gi|37520459|ref|NP_923836.1| ABC transporter permease [Gloeobacter violaceus PCC 7421]
 gi|35211453|dbj|BAC88831.1| glr0890 [Gloeobacter violaceus PCC 7421]
          Length = 496

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L + +++++ +         AA    L  V++  + I+Q+IP L  L F +    
Sbjct: 302 TFEHLLLVFASLLVGVAVGVPLGIWAAAKPALSQVILSGVGIIQTIPSLALLAFLIPVLQ 361

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +         + A+ A+F   +  +  + Y  L +IP  L E   +  L    +   + 
Sbjct: 362 QIG-------TVPALVALFLYSLLPIVRNTYTGLMDIPPGLRESGLALGLPAGARLRLIE 414

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQDLLA 240
           +P +   ++  +             + +I VG   I       G G  IA  +   D   
Sbjct: 415 LPLASRTILAGIKT-----------AAVINVGTATIAAFIGAGGFGERIATGLALNDNAT 463

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +L   +   G+  L  Q  F  +  W
Sbjct: 464 LLAGAIPAAGLALLV-QFAFDLLERW 488



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 10/174 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V   +++   + +P+GIW   +P +S  I     ++   P+      ++  +     
Sbjct: 306 LLLVFASLLVGVAVGVPLGIWAAAKPALSQVILSGVGIIQTIPSLALLAFLIPVLQQIGT 365

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L    L    +   I+ N   G    P   +E   +  +      R I LP      
Sbjct: 366 VPALVALFLY---SLLPIVRNTYTGLMDIPPGLRESGLALGLPAGARLRLIELPLASRTI 422

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           + G  TA       + ++     G       G G  IA          ++ G +
Sbjct: 423 LAGIKTAAVINVGTATIAAFIGAG-------GFGERIATGLALNDNATLLAGAI 469


>gi|118476134|ref|YP_893285.1| ABC transporter permease [Bacillus thuringiensis str. Al Hakam]
 gi|118415359|gb|ABK83778.1| ABC transporter, permease component [Bacillus thuringiensis str. Al
           Hakam]
          Length = 265

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 70  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTVPIVVLAPLFIIWFGYG- 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 129 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 186 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 238

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 239 VTLCLYFI 246



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 24  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 83

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q++PI+      +++F      KV+   L   F 
Sbjct: 84  IGTSIAILMDVIPLFRILINPLLVISQTVPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 143 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 195

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 196 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 246


>gi|222080807|ref|YP_002542535.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221725486|gb|ACM28575.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 272

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+   + I+++  + +G+ IG  P++ + + PF  +++  P     P++   +   
Sbjct: 77  ASLIRLFAGLGISTLTALLIGMLIGMLPYLRALLAPFVAVISMVPPLALLPILFIVMGLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L++ G    ++ ++   A   P +    A +   + W+    ++LP I P
Sbjct: 137 ETSK----IALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIALRVVLPQILP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T      G AW   I +E  S        +GLG  I       S   +   V+ +  
Sbjct: 193 RLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDIIFPYVVWITL 246

Query: 565 FVLALNRFL 573
             +  N  L
Sbjct: 247 LAVLTNYIL 255



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+ + + IS L   +   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDTWASLIRLFAGLGISTLTALLIGMLIGMLPYLRALLAPFVAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 131 IVMGLG--------ETSKIALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           I   ++ +  +  L + +L R  I 
Sbjct: 237 IFPYVVWITLLAVLTNYILDRIRIA 261


>gi|307155278|ref|YP_003890662.1| Substrate-binding region of ABC-type glycine betaine transporter
           [Cyanothece sp. PCC 7822]
 gi|306985506|gb|ADN17387.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. PCC 7822]
          Length = 507

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 60/141 (42%), Gaps = 8/141 (5%)

Query: 62  PQYASRT---TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           P+   RT    + +  AM I++        L  +  +L   ++ + + +Q+IP L     
Sbjct: 8   PEILLRTGEHLMLVAIAMGIAITIGIPLGILITRQPKLAQPILALANAIQTIPSLAIF-- 65

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               F+   P      ++ AI A+    +  +  + Y  + ++   + E  ++  ++ WQ
Sbjct: 66  ---GFLISLPFIGGIGKIPAIVALTLYALLPLIRNTYIGIKSVDPAIREAGKAMGMTDWQ 122

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
             + + +P ++  ++  + ++
Sbjct: 123 LLFQVEIPLALGVILAGVRVA 143



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + + IA  I IP+GI I  +P ++  I   A  +   P+   F  ++S      +
Sbjct: 18  LMLVAIAMGIAITIGIPLGILITRQPKLAQPILALANAIQTIPSLAIFGFLISLPFIGGI 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +       ++ N   G  +     +E   +  +T W+    + +P      
Sbjct: 78  G-KIPAIVALTLYALLPLIRNTYIGIKSVDPAIREAGKAMGMTDWQLLFQVEIPLALGVI 136

Query: 507 VTGAITA 513
           + G   A
Sbjct: 137 LAGVRVA 143


>gi|170691773|ref|ZP_02882937.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143057|gb|EDT11221.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 241

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 10/200 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ S+ +        +   +  ++L           + R   V++ +  I+ +IP +   
Sbjct: 10  NLASIIRLTVEHIEIVGVGVGFAILTGVPLGIAITANERAARVVLYLAAILMTIPSVALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      L  +  +F      +  + Y ++ NI   L E +R   ++ 
Sbjct: 70  GLMIPVLSLIGQGI---GFLPTVITLFLYSQLPIVRNTYTAITNIDPALREAARGIGMTT 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+ W + +P ++P ++  + M+       VV +  I      I   G+G  I+  I + 
Sbjct: 127 RQRLWKVEIPIALPIIMAGVRMA-------VVINVGIAAVAAYIGAGGLGKLISRGISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYD 256
           D   ++   + +  +    D
Sbjct: 180 DPRQLIAGAILVSVLAIAAD 199



 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 8/201 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F   ++  +I L    +  V V +  A +  +P+GI I      +  +   A +L   P+
Sbjct: 6   FMIDNLASIIRLTVEHIEIVGVGVGFAILTGVPLGIAITANERAARVVLYLAAILMTIPS 65

Query: 431 NVFFPLVVSCVSYYHLNPNLW-LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              F L++  +S            + +   +Q  I+ N     +      +E A    +T
Sbjct: 66  VALFGLMIPVLSLIGQGIGFLPTVITLFLYSQLPIVRNTYTAITNIDPALREAARGIGMT 125

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + +P   P  + G   A       + V+     G       GLG  I+    +
Sbjct: 126 TRQRLWKVEIPIALPIIMAGVRMAVVINVGIAAVAAYIGAG-------GLGKLISRGISQ 178

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
               +++ G +++    +A +
Sbjct: 179 SDPRQLIAGAILVSVLAIAAD 199


>gi|124485937|ref|YP_001030553.1| hypothetical protein Mlab_1117 [Methanocorpusculum labreanum Z]
 gi|124363478|gb|ABN07286.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanocorpusculum labreanum Z]
          Length = 627

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 77/481 (16%), Positives = 165/481 (34%), Gaps = 28/481 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      T   M+ A+ + ++     A LA   +++  ++ P ++++  IP + +  F +
Sbjct: 73  IIDTLLVTFGAMIFAVPLGIISAVFLAYLA--PQKVRDIVKPAIELLAGIPSVVYGFFGM 130

Query: 121 VYFMNLYPGKVI----GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           V   +     +      + LAA   +    +  +      +L  +P+D +E S     + 
Sbjct: 131 VVLCSFLQSTLNIPSGFSWLAASILLGIMALPTIVSVSEDALYVVPKDYKEASLGLGATK 190

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP------------- 223
           WQ    + +P +  G+   +++ +       +A  M+     VIP P             
Sbjct: 191 WQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWDVLSPVRTLTA 250

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
            +G  +            L+ +  +L +I L   LL   +       R   +        
Sbjct: 251 TLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPVFSVPAKIKTF 310

Query: 284 WVL--YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341
             L   +   +  +  IG         ++  +  +   L           L       V 
Sbjct: 311 LKLCGAILLISFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFGLIYAGTFIVI 370

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            +L +    +       I+W+ +    ++   +  ++   +G  T+  V   I+IA  I 
Sbjct: 371 GILVLILGNIFINGIPAISWEFLTTSPSNMGLEGGIFPAIIG--TLQLVGGAILIALPIG 428

Query: 402 IPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           I   I++        ++  ++    LLA  P+ VF  F      +        L   + +
Sbjct: 429 IGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVCLLAGMVCL 488

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  I+        + PN  +E +     T W+  + ++LP   P  +TG I + G 
Sbjct: 489 ALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILTGTILSIGR 548

Query: 517 A 517
           A
Sbjct: 549 A 549



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 69/188 (36%), Gaps = 9/188 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               +VIGI+ ++L  I    +P    + +  +     L        +  L  +  ++L 
Sbjct: 364 AGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNMGLEGGIFPAIIGTLQLVGGAILI 423

Query: 83  TFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
                  +A       +   L  +L    D++   P + F  F   + +      V    
Sbjct: 424 ALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGV--CL 481

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA +  +    +  +  +  ++L ++P  L E S     + WQ    + +P + PG++  
Sbjct: 482 LAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILTG 541

Query: 196 MMMSMSGG 203
            ++S+   
Sbjct: 542 TILSIGRA 549



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 14/234 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R     +    ++     +    S ++ I  + V+  + I       G+  N        
Sbjct: 4   RITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNPTGS 63

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPAN 431
              +     +   +++   A I  +P+GI             +   ++P  +LLA  P+ 
Sbjct: 64  TPSYGIATLIIDTLLVTFGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGIPSV 123

Query: 432 VFFPLVVSCVSYY---HLNPNLWLSLLMIFGTQWYILFNVIAGASA-----FPNDFKEVA 483
           V+    +  +  +    LN     S L        +    I   S       P D+KE +
Sbjct: 124 VYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMALPTIVSVSEDALYVVPKDYKEAS 183

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                T W+    +++P          I   G A   ++   + +     + + 
Sbjct: 184 LGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSP 237


>gi|77918466|ref|YP_356281.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
 gi|77544549|gb|ABA88111.1| ABC-type transport system, permease component [Pelobacter
           carbinolicus DSM 2380]
          Length = 245

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 87/243 (35%), Gaps = 12/243 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W+         +       +         L       IT+FR V+ + I+    +
Sbjct: 9   ILLGIWYAGTLFFGANLVPTPTQTLACLAELTTTLNFWANIAITIFRGVLALGISVTTAL 68

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+  G      +   P    L A P  ++  L++  V      P     + ++  +  
Sbjct: 69  VLGLAAGRSKRAMALTGPLVAALQASPPILWITLLMVWVGTGSKVP-----ITVVVASLL 123

Query: 463 YILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             LF  +A  A+   +   E+AS + +   R    I+L GI+P  + G   A G  W  +
Sbjct: 124 PPLFATVAQSAAVVDHRLFELASVYRVKRSRILTDILLRGIYPSLLGGFSYALGSCWKIA 183

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            V+E          + G+GA I  S    + PE+     ++    +A+   L  PL    
Sbjct: 184 AVAEFLG------SSQGIGARIYWSYRMLNMPELFAWATVLVGLGMAVELGLIRPLRNRA 237

Query: 582 TRC 584
              
Sbjct: 238 ETR 240



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 93/249 (37%), Gaps = 16/249 (6%)

Query: 22  LLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           L +F +++GI     L  G      P   +  +       +     + T  R + A+ IS
Sbjct: 4   LFSFCILLGIWYAGTLFFGANLVPTPTQTLACLAELTTTLNFWANIAITIFRGVLALGIS 63

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +    V    A +S+R   +  P++  +Q+ P + ++T  +V+                I
Sbjct: 64  VTTALVLGLAAGRSKRAMALTGPLVAALQASPPILWITLLMVWVGTG--------SKVPI 115

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S +  +  ++ QS   +   L E++  +R+   +    + +    P L+     +
Sbjct: 116 TVVVASLLPPLFATVAQSAAVVDHRLFELASVYRVKRSRILTDILLRGIYPSLLGGFSYA 175

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   W     +E +          GIG+ I  + +  ++  +      ++G+    +  L
Sbjct: 176 LGSCWKIAAVAEFLGSSQ------GIGARIYWSYRMLNMPELFAWATVLVGLGMAVELGL 229

Query: 260 FRPMIVWSN 268
            RP+   + 
Sbjct: 230 IRPLRNRAE 238


>gi|167031211|ref|YP_001666442.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166857699|gb|ABY96106.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 287

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 108/265 (40%), Gaps = 15/265 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGII---NILLHGIQETTVPRDIVDIVPI--TLDVHSLPQY 64
            +++R++   +   A +L++  +    +  +   +  +P  +     +   L    LP  
Sbjct: 27  PLAQRLWQQGWLRKALILLVIAVLWEAVARYQDNDLLLPSFLQTAAALWDGLVSGELPAK 86

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + + +L   V+ ++  F   +LA  ++    +L  +  +   +P +  L   +++F 
Sbjct: 87  VGVSLVILLKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPLALLWFG 146

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     + + IF +  S +W +  + Y     +   L    R++ L G +   ++ 
Sbjct: 147 LG--------DNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHIL 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E     +   
Sbjct: 199 VPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAG 256

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  ++ +  L + L+F  +   + +
Sbjct: 257 LAVVILIGLLVEGLVFNTLERLTVR 281



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R   +I++P   P  ++G  
Sbjct: 152 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHILVPAALPSILSGLK 211

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 212 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEG 269

Query: 572 FLWHPLYLYGTRC 584
            +++ L     R 
Sbjct: 270 LVFNTLERLTVRR 282


>gi|221194585|ref|ZP_03567642.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium rimae ATCC 49626]
 gi|221185489|gb|EEE17879.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium rimae ATCC 49626]
          Length = 257

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 86/244 (35%), Gaps = 10/244 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
              ++        +L + W  VV    +        Y V     +D   +     +T+  
Sbjct: 3   KLKRVLLPALTIVVLLVLWQIVVVLNIVPNYLVPSPYQVFLALIRDAGLLASHTLVTLEE 62

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            ++ + I  +I   + + +     +     P   +    P     PL+V  + +      
Sbjct: 63  SLLGLAIGVVIGFVIAVLMDRFEGLYHAFSPLITVSQTIPVVAIAPLLVLWMGFG----I 118

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   +L+   T + +   +I+   +  +D  ++  +      + +R++ LP     + +G
Sbjct: 119 LPKVVLVAISTFFPVTVALISAFRSVDSDVIDLMRTMGAHRVQIFRHVKLPAAARQFFSG 178

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +   A   ++++E            GLG Y+    +  ++  +   ++++    L L
Sbjct: 179 LQISVTYAVIGAVIAEWLGGDM------GLGVYMTRVRKAFAYDRMFAAIVVVSALSLLL 232

Query: 570 NRFL 573
             F+
Sbjct: 233 MWFV 236



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 91/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +LV+  I ++L+ +    VP      + +  D   L  +   T    L  + I ++
Sbjct: 13  TIVVLLVLWQIVVVLNIVPNYLVPSPYQVFLALIRDAGLLASHTLVTLEESLLGLAIGVV 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A L  +   L     P++ + Q+IP++      V++             L  +  
Sbjct: 73  IGFVIAVLMDRFEGLYHAFSPLITVSQTIPVVAIAPLLVLWMG--------FGILPKVVL 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S  + +T ++  +  ++  D+ ++ R+      Q F ++ +P +       + +S++
Sbjct: 125 VAISTFFPVTVALISAFRSVDSDVIDLMRTMGAHRVQIFRHVKLPAAARQFFSGLQISVT 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V +E +          G+G Y+    K      +  A++ +  +  L    +
Sbjct: 185 YAVIGAVIAEWLGG------DMGLGVYMTRVRKAFAYDRMFAAIVVVSALSLLLMWFV 236


>gi|254250444|ref|ZP_04943763.1| amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|124879578|gb|EAY66934.1| amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
          Length = 323

 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 31/240 (12%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV  ++ I+  G          +           L  YA +  L ++ +M +++      
Sbjct: 93  LVGSLVAIIAVGWALARG----IGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPA 148

Query: 87  ATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
             L ++ R   +    +  + +I  +IP L  L   +  F            + AI A+F
Sbjct: 149 GVLLSRPRFQHQAERFMQ-VFNIGNTIPSLAVLAIALGIFGIG--------NVPAIVALF 199

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +  +T + Y+ + N+P  L E ++   ++GWQ    + +P ++P +V  +  +++  
Sbjct: 200 LASLLPVTRNAYEGMKNVPAALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALA-- 257

Query: 204 WFFVVASEMIVVGDT----VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                    I VG      +I    +GS I   I   +   +L        +  + D ++
Sbjct: 258 ---------INVGTAPLAYLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALVLDGIV 308



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 80/245 (32%), Gaps = 15/245 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            +  S +R+                I + W     I     +Q    + +     M  VV
Sbjct: 76  RRTESRRRIFMTRRTVQLVGSLVAIIAVGWALARGIGAETFHQRADDLAYYAGQHMLLVV 135

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNP 448
             + +A  + +P G+ +  RP    + + F Q+       P+     + +          
Sbjct: 136 YSMTLAIAVGVPAGVLL-SRPRFQHQAERFMQVFNIGNTIPSLAVLAIALGIFGIG---- 190

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           N+   + +   +   +  N   G    P   +E A    +TGW+    + LP   P  V 
Sbjct: 191 NVPAIVALFLASLLPVTRNAYEGMKNVPAALREAAKGIGMTGWQSLVRVELPNALPIIVG 250

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA       + ++         +    LG+ I       + P ++LG  +     L 
Sbjct: 251 GVRTALAINVGTAPLA-------YLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALV 303

Query: 569 LNRFL 573
           L+  +
Sbjct: 304 LDGIV 308


>gi|255523879|ref|ZP_05390843.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185930|ref|ZP_06854335.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255512441|gb|EET88717.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049198|gb|EFG88627.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 247

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 105/238 (44%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ ++L+  + ++ ++       P ++++++   +      + A  + LR+++ + +S+ 
Sbjct: 15  LIFWMLIWELCSLFINNSLLLPSPLEVIEVLVQLVKKIYFWECAFNSVLRVIAGVSLSIG 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +AA ++ +  +L P++  +++ P++  +   +V+F               IF 
Sbjct: 75  IGIFIGIIAAVNKFIEELLEPLIVCIKATPVMSIIILALVWFKASN---------VVIFT 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +    +  ++ + +  + ++L E++  +++        + +P+    +V  ++M + 
Sbjct: 126 SVLTCFPIIYTNVLEGIKAVDKNLIEMASVYKVKNKYIIKDIYLPYIKHYIVSGVLMCLG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GW   VASE++ +         IG  +  A    +   +    + ++ + F+++ + 
Sbjct: 186 MGWKVSVASEVLSIPKYS-----IGLNLLNAKSTLETAELFAWTIVIVALSFIFEIIF 238



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 12/192 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ RV+  + ++  I I +GI       I   ++P    + A P      L +    
Sbjct: 58  AFNSVLRVIAGVSLSIGIGIFIGIIAAVNKFIEELLEPLIVCIKATPVMSIIILALVWFK 117

Query: 443 YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             +      + +     T + I++ NV+ G  A   +  E+AS + +      + I LP 
Sbjct: 118 ASN------VVIFTSVLTCFPIIYTNVLEGIKAVDKNLIEMASVYKVKNKYIIKDIYLPY 171

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I  Y V+G +   G  W  S+ SEV S          +G  +  +       E+    ++
Sbjct: 172 IKHYIVSGVLMCLGMGWKVSVASEVLSIPKYS-----IGLNLLNAKSTLETAELFAWTIV 226

Query: 562 MCCFVLALNRFL 573
           +           
Sbjct: 227 IVALSFIFEIIF 238


>gi|296331963|ref|ZP_06874427.1| putative permease of ABC transporter [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675643|ref|YP_003867315.1| putative permease of ABC transporter [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150734|gb|EFG91619.1| putative permease of ABC transporter [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413887|gb|ADM39006.1| putative permease of ABC transporter [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 270

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   L   SL  +   T    +   ++        A L   S RL  +L P
Sbjct: 56  SSPSAVWHLLLEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLAALLWWSNRLARILDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVILNAMPKVALGPILIVALGPSFISIIAMGAIISVIITTIV--------VYTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F    W  F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ENYIKVMKTFGAKKWVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++L +     L  Q
Sbjct: 222 VGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLMYQ 256



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T+F  V+  ++ + +   +   + +   ++  + P+  +L A P     P+
Sbjct: 72  GSLLSHIGVTLFETVLGFLLGTFMGTCLAALLWWSNRLARILDPYLVILNAMPKVALGPI 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +    ++    +  +    +       V         ++ +V  +F    W  ++ 
Sbjct: 132 LIVALGPSFIS----IIAMGAIISVIITTIVVYTAFQEVDENYIKVMKTFGAKKWVIFKE 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++      G +W   IV E        +   GLG  I    +  +F  V 
Sbjct: 188 VILPASSPAIISTLKVNVGLSWVGVIVGEFL------VSKVGLGYMIIYGFQVFNFTLVF 241

Query: 557 LGVLIMCCFVLAL 569
           L +LI+  F   +
Sbjct: 242 LSLLIIAIFATLM 254


>gi|50120459|ref|YP_049626.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49610985|emb|CAG74430.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 288

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 58/126 (46%), Gaps = 2/126 (1%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + +F +  S +W M  + Y     +   L    R++ L+G++    + +P ++P ++ 
Sbjct: 150 EKSLVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYISAILIPAALPSILS 209

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +  +  W  ++A+E++    +     G+G YI     E     +   + +++ +  L
Sbjct: 210 GLKIGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLL 267

Query: 255 YDQLLF 260
            + L+F
Sbjct: 268 VEGLVF 273



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  +G        +    ++ +TG+R+   I++P   P  ++G  
Sbjct: 153 LVFVLVHSVMWPMALNTYSGFLGVSETLRMAGRNYGLTGFRYISAILIPAALPSILSGLK 212

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +     V  G+  +    L +  
Sbjct: 213 IGWAFAWRTLIAAELVFGASS--GNGGLGWYIFQNRNELYTDRVFAGLASVIIIGLLVEG 270

Query: 572 FLWHPLYLYGTRC 584
            ++  +     + 
Sbjct: 271 LVFSTIEKVTVKR 283


>gi|295703024|ref|YP_003596099.1| ABC transporter permease [Bacillus megaterium DSM 319]
 gi|294800683|gb|ADF37749.1| ABC transporter, permease protein [Bacillus megaterium DSM 319]
          Length = 247

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 78/237 (32%), Gaps = 19/237 (8%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---------TMFRVVV 392
                    V+   A  I  + + Y     T   +L  +W   +         T+  VV+
Sbjct: 3   KYGASVILVVILLAAWEIGARIVNYPFILPTPTGILTKLWDLRMDLLFKHLPATLSIVVI 62

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++I+ ++ + + +W+ + P I     P        P     P+ V    Y         
Sbjct: 63  GLVISVVLGVLLAVWMNWSPLIERAFYPLIIASQMIPTIAIAPVFVLWFGYS----IWSK 118

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++ +  T + I  +   G  +   + KE+  +   T    +  + +P   P++ +G   
Sbjct: 119 VIVTVLITFFPITVSTFDGLRSTNKELKELMLTMGATKKDIFFKLNIPSALPHFYSGLKV 178

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   +   + + E            GLG +      +     V   ++I+    +  
Sbjct: 179 AVTFSIIGAAIGEWLG------AQAGLGYFSRRMMTQFDAAGVFAPIVILSALGILF 229



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 19/238 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPI-----TLDVHSLPQYASRTTLRMLSAMV 77
            + +LV+ ++     G +    P  +     I      L +  L ++   T   ++  +V
Sbjct: 6   ASVILVVILLAAWEIGARIVNYPFILPTPTGILTKLWDLRMDLLFKHLPATLSIVVIGLV 65

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           IS++   + A     S  +     P++   Q IP +      V++F          +  +
Sbjct: 66  ISVVLGVLLAVWMNWSPLIERAFYPLIIASQMIPTIAIAPVFVLWFGY--------SIWS 117

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +        + +T S +  L +  ++L+E+  +   +    F+ L +P ++P     + 
Sbjct: 118 KVIVTVLITFFPITVSTFDGLRSTNKELKELMLTMGATKKDIFFKLNIPSALPHFYSGLK 177

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++++   F ++ +    +G+ +    G+G +    + + D   +   ++ +  +  L+
Sbjct: 178 VAVT---FSIIGA---AIGEWLGAQAGLGYFSRRMMTQFDAAGVFAPIVILSALGILF 229


>gi|260776831|ref|ZP_05885725.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606497|gb|EEX32771.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio coralliilyticus ATCC BAA-450]
          Length = 266

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 97/248 (39%), Gaps = 19/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L   ++ +          P D+ + +    DV  L ++   T   ++  +++ L 
Sbjct: 32  VIILGLWQLVVVMFDMPSFILPTPLDVFERLVSRFDV--LMKHTLVTGQEIVLGLLLGLS 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A      + L   L+PIL   Q+IP+       +++       KV+ A +   F 
Sbjct: 90  MGLFFALQMLLFKPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAMIIFFP 149

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + T          Y  L N P    +++++   S WQ   ++ +P ++P L   + +++ 
Sbjct: 150 VTTCC--------YDGLRNTPTGYLDLAKTMGASKWQMLKHIQLPAALPTLASGIRVAV- 200

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
                V+A    VVG+ V    G+G  +  A     +  +  A+  +  +      +   
Sbjct: 201 -----VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILALLSVSLYFITDK 255

Query: 259 LFRPMIVW 266
           L + +I W
Sbjct: 256 LLKKLIPW 263



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   + P      A P     P+++  + Y   +  +  ++++ F     +     
Sbjct: 100 LFKPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAMIIFF----PVTTCCY 155

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P  + ++A +   + W+  ++I LP   P   +G   A   A   ++V E    
Sbjct: 156 DGLRNTPTGYLDLAKTMGASKWQMLKHIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG- 214

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 + GLG  + ++  +    E+   + I+    ++L
Sbjct: 215 -----SSEGLGYLMLQANARMIIDEMFAALFILALLSVSL 249


>gi|209549273|ref|YP_002281190.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535029|gb|ACI54964.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 287

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 93/251 (37%), Gaps = 6/251 (2%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                     +  L++     V  +L + W   V    +          V +    D   
Sbjct: 19  NPSAAGARRRDLALRIAIPFLVIGLLILIWNAYVKLSGVPPYILPGPAAVANAFVTDWGT 78

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +T    ++ +++A +  +   I++     I     P A +L   P     PL++
Sbjct: 79  LAPALWVTTKITLLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPVVAISPLIL 138

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                Y  +  + L +       + IL N++ G  +  ++   +   +  + W+   ++ 
Sbjct: 139 I----YAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLFLK 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY++TG     G A  A++V+E A+          L   + E+  + + P +   
Sbjct: 195 LPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAA 252

Query: 559 VLIMCCFVLAL 569
           +L++    +A+
Sbjct: 253 LLMLSLLGVAI 263



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 87/237 (36%), Gaps = 10/237 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F ++  +++I    + L G+    +P           D  +L      TT   L ++++
Sbjct: 37  PFLVIGLLILIWNAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVTTKITLLSLML 96

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+    +A    +SR + +   P+  I+Q  P++      ++Y            ++A 
Sbjct: 97  ALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPVVAISPLILIY--------APSTQVAL 148

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F    + +  +M Q L ++  +L  +   +  S WQ   +L +P + P  +  + +
Sbjct: 149 LICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLFLKLPAAQPYFMTGLRI 208

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V +E             +   +  A    ++  +  A+L +  +    
Sbjct: 209 GGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAI 263


>gi|322386470|ref|ZP_08060097.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
 gi|321269389|gb|EFX52322.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
          Length = 250

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 9   RQQISLLGMLGILVIWQVMGCLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + + ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLALGVILACILAVLMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 233

Query: 254 L 254
           L
Sbjct: 234 L 234



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  + C   +          +     +D  ++      T+   ++ + +  I+  
Sbjct: 19  GILVIWQVMGCLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLALGVILAC 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 79  ILAVLMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 134

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 135 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 194

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 195 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 239


>gi|315651560|ref|ZP_07904580.1| glycine/betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315486215|gb|EFU76577.1| glycine/betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 512

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 66/179 (36%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F  +     ++ ++   + + +++ + +IP +  L F + +               AI 
Sbjct: 36  VFGGIVGIFISEFQKSAKLTLGVINFLYTIPSISMLGFLIPFSGIGN--------ATAII 87

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+    +  M  + Y  + N+   + E ++    +  Q  + + +P +MP ++  +    
Sbjct: 88  ALTIYALLPMVRNTYTGMINVDAGILEAAKGMGSTKKQILFRVQIPLAMPVIISGIR--- 144

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V  +  +    + I   G+G  I   I   +    +   L +  +    D +L
Sbjct: 145 ----NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNAAMTITGSLLIAVLALAVDFIL 199



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 11/175 (6%)

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +    VGI+I      +         L   P+      ++      +    + L++  + 
Sbjct: 36  VFGGIVGIFISEFQKSAKLTLGVINFLYTIPSISMLGFLIPFSGIGNATAIIALTIYALL 95

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++ N   G         E A     T  +    + +P   P  ++G         
Sbjct: 96  ----PMVRNTYTGMINVDAGILEAAKGMGSTKKQILFRVQIPLAMPVIISGIR------- 144

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           N   ++   +     +   GLG  I       +    + G L++    LA++  L
Sbjct: 145 NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNAAMTITGSLLIAVLALAVDFIL 199


>gi|300814418|ref|ZP_07094689.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511526|gb|EFK38755.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 208

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 73/186 (39%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++ + +L          +S+ +  + + +  ++Q++P    L   +  F          
Sbjct: 25  ISLGLGILIAVPIGIFLIRSQVIAKIFMALASVLQTVPSFALLAIMIPIFGVG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +  AI A+F   +  +  + Y  +  +  +L + +    ++  Q  + + +P +MP ++
Sbjct: 78  -KKPAICALFIYSLLPIMRNTYLGIEAVDSNLIDAALGMGMTKSQLLFKVQLPMAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G +I   +    +  +++  + +  +  
Sbjct: 137 SGIRLSAVYVLSWATLASYIGGG-------GMGDFIFNGLNNAIMPMVVWGTIPVTLLAI 189

Query: 254 LYDQLL 259
           L D LL
Sbjct: 190 LADFLL 195



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + +  +I +P+GI++     I+      A +L   P+     +++        
Sbjct: 20  LYISTISLGLGILIAVPIGIFLIRSQVIAKIFMALASVLQTVPSFALLAIMIPIFGVG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +   +   I+ N   G  A  ++  + A    +T  +    + LP   P  
Sbjct: 78  --KKPAICALFIYSLLPIMRNTYLGIEAVDSNLIDAALGMGMTKSQLLFKVQLPMAMPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       G+G +I         P VV G + +    
Sbjct: 136 MSGIRLSAVYVLSWATLASYIGGG-------GMGDFIFNGLNNAIMPMVVWGTIPVTLLA 188

Query: 567 LALNRFLWH 575
           +  +  L  
Sbjct: 189 ILADFLLRK 197


>gi|296123110|ref|YP_003630888.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces limnophilus DSM 3776]
 gi|296015450|gb|ADG68689.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces limnophilus DSM 3776]
          Length = 277

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 6/186 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T    VV   ++ ++   VG        I S   P+A  L   P     PL++     
Sbjct: 74  LLTGGSAVVGFSLSVLVGTLVGCLFSQSTIIRSSGYPYAIFLQTVPIIAVAPLIILWFGR 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  +    + + ++ N  AG      D  ++      + W+    + LP   
Sbjct: 134 GFGG----VVAVAFVISLFPMIANATAGMVQIDPDLFDLFKLNDASRWQILFKLRLPNSV 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TGA T+ G A   +IV E   +     +  GLG  I  +T++     +   V++  
Sbjct: 190 PSLCTGARTSSGLAVVGAIVGEF--YAGYGSKHFGLGYIIRLTTDQAKTDALFAAVMVST 247

Query: 564 CFVLAL 569
              + +
Sbjct: 248 LLGILI 253



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 10/242 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R       L   VL+     +   GI+   +P     +  I      L +    T    +
Sbjct: 22  RTIVPPLVLFVIVLMAWDGAVRFWGIKPYILPGPWRVLSAIVSSQEELTKAFLLTGGSAV 81

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +S+L   +   L ++S  +     P    +Q++PI+      +++F   + G    
Sbjct: 82  VGFSLSVLVGTLVGCLFSQSTIIRSSGYPYAIFLQTVPIIAVAPLIILWFGRGFGG---- 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                +   F   ++ M  +    +  I  DL ++ +    S WQ  + L +P S+P L 
Sbjct: 138 ----VVAVAFVISLFPMIANATAGMVQIDPDLFDLFKLNDASRWQILFKLRLPNSVPSLC 193

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                S        +  E      +     G+G  I L   +    A+  A++    +  
Sbjct: 194 TGARTSSGLAVVGAIVGEFYAGYGS--KHFGLGYIIRLTTDQAKTDALFAAVMVSTLLGI 251

Query: 254 LY 255
           L 
Sbjct: 252 LI 253


>gi|221068441|ref|ZP_03544546.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220713464|gb|EED68832.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 253

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 14/178 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++ + T    L    +++      A    +S+ L  +++P L ++QS PI+      VV
Sbjct: 54  LEHVTATLQVALIGYALAIALAIPLAIAITRSQLLSKIIMPWLVVIQSTPIVAVAPIIVV 113

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                   +V+   L A F         +  S    L ++P +L E+SRS R +  +++W
Sbjct: 114 TLGAGLLPRVVITTLIAFF--------PLVVSTALGLASVPAELVELSRSLRATTSRQYW 165

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + +PF++P +   + +S++      V +E +          G+G  I  A     + 
Sbjct: 166 QIRMPFAVPYVFSALKVSITLAIVGAVVAEFVA------AEKGLGYLILFATSSFKVP 217



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   +A  + IP+ I I     +S  I P+  ++ + P     P++V  +   
Sbjct: 59  ATLQVALIGYALAIALAIPLAIAITRSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L       ++      + ++ +   G ++ P +  E++ S   T  R +  I +P   P
Sbjct: 119 LL----PRVVITTLIAFFPLVVSTALGLASVPAELVELSRSLRATTSRQYWQIRMPFAVP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           Y  +    +   A   ++V+E  +         GLG  I  +T     P
Sbjct: 175 YVFSALKVSITLAIVGAVVAEFVAAEK------GLGYLILFATSSFKVP 217


>gi|331082190|ref|ZP_08331317.1| hypothetical protein HMPREF0992_00241 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402984|gb|EGG82549.1| hypothetical protein HMPREF0992_00241 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 269

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 84/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I+D +   +   SL ++ S T    L +  +  L   + A +     R+  +L P
Sbjct: 55  SSPSQILDTMFKMISDGSLTKHISVTLTETLISFALVTLLGILCAVILWIFPRVSSILEP 114

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  +     +I     AIF            ++Y   C I 
Sbjct: 115 YLVVLNSLPKSALAPLLIVWLGSNMKTIIIAGISVAIFGA--------VLNLYTGFCEID 166

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  ++ ++   +       + +P S+P ++  M +++      +V  EMI         
Sbjct: 167 SDKLKLIQTLGGNKKDALIKVILPASIPLILSVMKVNIGLSLIGIVIGEMIG------SK 220

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  + +   L  ++ A++ +  +  L    +
Sbjct: 221 QGLGYLIIYSSQVFQLTTMIMAIVILCVIAILLYGFI 257



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++   + +++ I   + +   P +SS ++P+  +L + P +   PL++  +   
Sbjct: 79  VTLTETLISFALVTLLGILCAVILWIFPRVSSILEPYLVVLNSLPKSALAPLLIVWLGSN 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                +    + IFG     + N+  G     +D  ++  +           +ILP   P
Sbjct: 139 MKTIIIAGISVAIFGA----VLNLYTGFCEIDSDKLKLIQTLGGNKKDALIKVILPASIP 194

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G +    ++ E+           GLG  I  S++      +++ ++I+C 
Sbjct: 195 LILSVMKVNIGLSLIGIVIGEMIG------SKQGLGYLIIYSSQVFQLTTMIMAIVILCV 248

Query: 565 FVLALNRFL 573
             + L  F+
Sbjct: 249 IAILLYGFI 257


>gi|192362314|ref|YP_001983178.1| ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190688479|gb|ACE86157.1| ABC transporter, permease protein [Cellvibrio japonicus Ueda107]
          Length = 272

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 84/228 (36%), Gaps = 15/228 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL    +       +   P       L  Q    +  R+   ++I+    F    L    
Sbjct: 45  LLPSFSQMGDAIKTLAFEPSKRTGEYLFWQDTLSSLERLGLGILIAAALGFSIGILTGAI 104

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L     P+L I+  +P +  L    + F           E++ +  I       +   
Sbjct: 105 PTLHAPFAPLLTIISLVPPMALLPILFIVFGLG--------EVSKVALIVIGVAPFIARD 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +    IP +    +++   S WQ    + +P  +P L+  + +S+  GW F++A+E I
Sbjct: 157 IQRCTQEIPLEQLVKAQTLGASSWQILLRVLIPQLLPRLINAVRLSLGAGWLFLIAAEAI 216

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              D      G+G  I L  +   +  IL  +  +  + F+ D LL +
Sbjct: 217 ASTD------GLGYRIFLVRRYLSMDVILPYVAWITLLAFVIDWLLAK 258



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)

Query: 378 YVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ W   ++ + R+ + I+IA+ +   +GI  G  P + +   P   +++  P     P+
Sbjct: 70  YLFWQDTLSSLERLGLGILIAAALGFSIGILTGAIPTLHAPFAPLLTIISLVPPMALLPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        ++       L++ G   +I  ++       P +    A +   + W+    
Sbjct: 130 LFIVFGLGEVSK----VALIVIGVAPFIARDIQRCTQEIPLEQLVKAQTLGASSWQILLR 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P + P  +     + G  W   I +E  +       T GLG  I       S   ++
Sbjct: 186 VLIPQLLPRLINAVRLSLGAGWLFLIAAEAIA------STDGLGYRIFLVRRYLSMDVIL 239

Query: 557 LGVLIMCCFVLALNRFL 573
             V  +      ++  L
Sbjct: 240 PYVAWITLLAFVIDWLL 256


>gi|89894235|ref|YP_517722.1| hypothetical protein DSY1489 [Desulfitobacterium hafniense Y51]
 gi|219668640|ref|YP_002459075.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|89333683|dbj|BAE83278.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538900|gb|ACL20639.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 258

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 17/245 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIA-----WQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
              + +     + W  +    ++ +         +  +       +V         ++ R
Sbjct: 11  GKPRIIKVWAVLLWVALWQAGSMALGQEILLVSPVSVLQRLVVLAEVADFWHSIAFSLGR 70

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           +    ++A+   + +         I   + P    + A P   F  LV+  V      P+
Sbjct: 71  IASGFLLATAAGVILAALSARFQRIQELLAPAMLTIKAIPVASFIILVLIWV------PS 124

Query: 450 LWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
             LS+L+ F     I++ NV+ G  A      E+A  F +   R  RYI L  + P++  
Sbjct: 125 RNLSVLISFLMVLPIIYTNVLDGIKATDPQLLEMARLFDLPPGRTMRYIYLSQVLPFFRA 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                 G  W + I +EV            +G  +  +      P++    L++    L 
Sbjct: 185 ACSVTLGLCWKSGIAAEVIGIPQGS-----IGEKLYHAKIYLDTPDLFAWTLVIVLISLV 239

Query: 569 LNRFL 573
             +  
Sbjct: 240 FEKLF 244



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 99/242 (40%), Gaps = 14/242 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ +L +V +    ++ L        P  ++  + +  +V       + +  R+ S  ++
Sbjct: 18  VWAVLLWVALWQAGSMALGQEILLVSPVSVLQRLVVLAEVADFWHSIAFSLGRIASGFLL 77

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +     + A L+A+ +R+  +L P +  +++IP+  F+   +++         + +   +
Sbjct: 78  ATAAGVILAALSARFQRIQELLAPAMLTIKAIPVASFIILVLIW---------VPSRNLS 128

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F   +  +  ++   +      L E++R F L   +   Y+ +   +P       +
Sbjct: 129 VLISFLMVLPIIYTNVLDGIKATDPQLLEMARLFDLPPGRTMRYIYLSQVLPFFRAACSV 188

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W   +A+E+I      IP   IG  +  A    D   +    L ++ +  ++++L
Sbjct: 189 TLGLCWKSGIAAEVIG-----IPQGSIGEKLYHAKIYLDTPDLFAWTLVIVLISLVFEKL 243

Query: 259 LF 260
             
Sbjct: 244 FL 245


>gi|299065888|emb|CBJ37067.1| putative ABC-type glycine betaine transport system,
           Substrate-binding inner membrane component [Ralstonia
           solanacearum CMR15]
          Length = 520

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 16/236 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +    L G        +      +      L +   R    +  +   + L       LA
Sbjct: 290 VAARFLAGQSMPAARAEAPTHAFLAQLSDGLWRLTRRHLALVAISTGAAALIGVPLGLLA 349

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +  +
Sbjct: 350 AR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------VVPALIALTLYALLPI 401

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L  +P  L + + +   +  Q+   + +P ++P ++  +  +          +
Sbjct: 402 VRNTIVGLEQVPDGLRDAALALGFTPAQRTRVVDLPLALPVILAGIKTAAVISVGTATIA 461

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             I  G       G G  IA  +   D  AIL A      V+ L  Q  F  +  W
Sbjct: 462 AFIGAG-------GYGERIATGLALND-SAILLAGAIPAAVLALLVQGAFEAVESW 509



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 13/276 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
           F R+     +    P  +  +    T    R H  E      + +             + 
Sbjct: 237 FPRYDAVVLYRLDVPARHAAQWRAITALAGRIHRDEMVAMNAAVELEGQPFARVAARFLA 296

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G ++  A              D L+   L    +  V +    A++I +P+G+    R  
Sbjct: 297 GQSMPAARAEAPTHAFLAQLSDGLW--RLTRRHLALVAISTGAAALIGVPLGLL-AARRR 353

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           I   +     +L   P+     +++  V    + P L   + +       I+ N I G  
Sbjct: 354 IQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGVVPAL---IALTLYALLPIVRNTIVGLE 410

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P+  ++ A +   T  +  R + LP   P  + G  TA   +   + ++     G   
Sbjct: 411 QVPDGLRDAALALGFTPAQRTRVVDLPLALPVILAGIKTAAVISVGTATIAAFIGAG--- 467

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               G G  IA          ++ G +      L +
Sbjct: 468 ----GYGERIATGLALNDSAILLAGAIPAAVLALLV 499


>gi|300868509|ref|ZP_07113128.1| phosphate ABC transporter permease (modular protein) [Oscillatoria
           sp. PCC 6506]
 gi|300333498|emb|CBN58316.1| phosphate ABC transporter permease (modular protein) [Oscillatoria
           sp. PCC 6506]
          Length = 638

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 68/472 (14%), Positives = 168/472 (35%), Gaps = 32/472 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF----LTFTVV 121
            L    I++ F      LAA        + +  +L P L+ +  IP + +    L F   
Sbjct: 92  TLLTTAIAMTFAMPIGLLAAIYLSEYAPQTVRYILKPSLETLAGIPTVVYGYFALLFVTP 151

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               + P     + L+A        V  ++     ++ ++P    E + +  L+  +   
Sbjct: 152 LLQKIIPNLAGFSPLSAGLVTGVMIVPIISSLSEDAINSVPNKFREGAYALGLTKREVIT 211

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIALAIK 234
            + +P + PG++ +  ++ S      + + +         L  +          I L++ 
Sbjct: 212 KIVLPIAFPGIIASFTLAASRSLGETLIASIAAGQTPQFTLNPLEPVSTMTAFIIQLSLG 271

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK-FRLERTTGIYPADSWVLYLFRKTN 293
           +    ++ + ++  +G++     L    +  W  + +R + +  + P++   + +   ++
Sbjct: 272 DVPFNSLEFHIIFTVGMVIFLLTLTLNILSYWLVRNYRNQLSEVVVPSEIAEVQIVINSS 331

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
                  S      P +       R L           + + +      +L + +F +  
Sbjct: 332 SNTTGFDSQKKCIKPETFLPYFYQRNL----LDQIFKTITIAATLVGILVLFLLFFDIGI 387

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-- 411
                + W+ I    +       +Y   +G  T + + +  I A+ I +   I++     
Sbjct: 388 DGFFRLDWEFITTFSSRKPEDSGIYAALIG--TFWLLGLTAIFATPIGVGAAIYLEEYIP 445

Query: 412 -PHISSKIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               S  ++     LAA P+ ++      + V  + ++    ++  + L +      +L 
Sbjct: 446 DNIFSQFLEINIANLAAMPSIIYGLLGLGVFVHALGFFTGESSILSASLTLSVIILPLLI 505

Query: 467 -NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               +     P   +E   +  +T W+   YI+LP   P  +TG + +  GA
Sbjct: 506 IATRSALRTVPYSLREAGYATGMTRWQVLFYIVLPSSLPGILTGTLLSLSGA 557


>gi|158423602|ref|YP_001524894.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system
           permease component [Azorhizobium caulinodans ORS 571]
 gi|158330491|dbj|BAF87976.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system
           permease component [Azorhizobium caulinodans ORS 571]
          Length = 293

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     I   + P+A  L + P     PLVV    +   +     +LL      + +L N
Sbjct: 122 MAESRVIEKLLMPYAFALQSLPKVAIAPLVVIWFGFGDGSKIAISALL----AFFPMLIN 177

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G  +   +  ++  S   + +  +R + LP   PY   G   A   A   +IV+E  
Sbjct: 178 SFTGLRSVEPERIDLMRSLSASRFETYRIVKLPNAAPYIFAGLDMAVVYALLGTIVAEFL 237

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                     G+G  I ++        V   ++I+    + L
Sbjct: 238 G------AQQGMGVVITQAQAVTDVAGVFAALVILGAMGILL 273



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 76/183 (41%), Gaps = 17/183 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
            A+SR +  +L+P    +QS+P +      V++F      K+  + L A F         
Sbjct: 122 MAESRVIEKLLMPYAFALQSLPKVAIAPLVVIWFGFGDGSKIAISALLAFF--------P 173

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M  + +  L ++  +  ++ RS   S ++ +  + +P + P +   + M++       + 
Sbjct: 174 MLINSFTGLRSVEPERIDLMRSLSASRFETYRIVKLPNAAPYIFAGLDMAVVYALLGTIV 233

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
           +E +          G+G  I  A    D+  +  A++ +  +  L     + L   ++ W
Sbjct: 234 AEFLG------AQQGMGVVITQAQAVTDVAGVFAALVILGAMGILLHGIVRGLEARVVHW 287

Query: 267 SNK 269
           +++
Sbjct: 288 ADR 290


>gi|86360399|ref|YP_472287.1| putative ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284501|gb|ABC93560.1| putative ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 272

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + I++ I + +G+ IG  P++ + + PF  +++  P     P++   +  
Sbjct: 76  GASLVRLLSGLGISTAIALIIGMLIGMLPYLRALLAPFIAVISMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ G    ++ ++   A   P +    A +   + W+    I+LP I 
Sbjct: 136 GETSK----IALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRIVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G AW   I +E  S        +GLG  I       S   +   V+ + 
Sbjct: 192 PRLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDIIFPYVVWIT 245

Query: 564 CFVLALNRFL 573
              + +N  L
Sbjct: 246 LLAVVMNALL 255



 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+LS + IS     +   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDTGASLVRLLSGLGISTAIALIIGMLIGMLPYLRALLAPFIAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 131 IVMGLG--------ETSKIALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRIVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           I   ++ +  +  + + LL R
Sbjct: 237 IFPYVVWITLLAVVMNALLDR 257


>gi|313623801|gb|EFR93932.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Listeria innocua FSL
           J1-023]
          Length = 504

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 25/192 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP         +  + L    V 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPS--------LALLGLLIPLVG 78

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +   MP +
Sbjct: 79  IGIVPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLXXXMPVI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQDLLAILYAMLT 247
           +  +  +M           ++++G   +    IG+      I L I   D   IL   + 
Sbjct: 139 MAGIRTAM-----------VLIIGTATLAAL-IGAGGLGDLILLGIDRNDNSLILLGAIP 186

Query: 248 MLGVIFLYDQLL 259
              +  L+D LL
Sbjct: 187 AALLAILFDFLL 198



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLN 447
            V + IA +I +P+GI++     ++   +P  Q+ A     P+     L++  V    + 
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLA---EPIIQVAAIFQTIPSLALLGLLIPLVGIGIVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L +  +      IL N   G         E + +  +  W+    + L    P  +
Sbjct: 84  AIIALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLXXXMPVIM 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + ++ +   G +               ++     ++LG +      +
Sbjct: 140 AGIRTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAI 192

Query: 568 ALNRFLWHPL 577
             + FL   L
Sbjct: 193 LFD-FLLRFL 201


>gi|298293328|ref|YP_003695267.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296929839|gb|ADH90648.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 272

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           A    W +I  +          Y++W    +++ R+ + + I++++ + +GI +GF P++
Sbjct: 48  AFASFWATIVRMATTIDVATKQYLLWWDTWLSLQRLFLGLGISALMGLVLGIVVGFIPYL 107

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            S  +PF    +  P     P++        ++      +L++FG   +I+ +V+   +A
Sbjct: 108 RSTFEPFFAAFSLIPPLAVLPILFIIFGLGEVSK----IVLIVFGIAPFIIRDVMLRVAA 163

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P +    A +   + W+    ++LP + P  +     + G AW   I +E  +      
Sbjct: 164 IPTEQIIKAQTLGGSTWQMITGVVLPQVMPRLIDSVRLSLGAAWLFVIAAEAIT------ 217

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
              GLG  I       +   ++  V  +      ++  L  
Sbjct: 218 AEGGLGYRIFLVRRYLAMDVILPYVAWITLLAFLMDYGLRR 258



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 76/214 (35%), Gaps = 14/214 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +   + +    + L      +  R+   + IS L   V   +      L     P     
Sbjct: 59  MATTIDVATKQYLLWWDTWLSLQRLFLGLGISALMGLVLGIVVGFIPYLRSTFEPFFAAF 118

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
             IP L  L    + F           E++ I  I       +   +   +  IP +   
Sbjct: 119 SLIPPLAVLPILFIIFGLG--------EVSKIVLIVFGIAPFIIRDVMLRVAAIPTEQII 170

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +++   S WQ    + +P  MP L+ ++ +S+   W FV+A+E I          G+G 
Sbjct: 171 KAQTLGGSTWQMITGVVLPQVMPRLIDSVRLSLGAAWLFVIAAEAIT------AEGGLGY 224

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            I L  +   +  IL  +  +  + FL D  L R
Sbjct: 225 RIFLVRRYLAMDVILPYVAWITLLAFLMDYGLRR 258


>gi|251796609|ref|YP_003011340.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247544235|gb|ACT01254.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 288

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  I++ +  ++   S+  +   T    +   ++  L     A L      L  VL P L
Sbjct: 74  PTKIINQLWNSMADGSIWPHIGMTVSETIIGFLLGTLVGTGIAALLWWFPFLSRVLDPYL 133

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++ S+P +      +V     +         + +    +  V   T ++Y     I   
Sbjct: 134 VVLNSLPKVALGPLFIVTLGPGFT--------SIVAVTLSVTVIITTINIYNRFREIEAG 185

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             +V R F  S  Q F  + +P S P ++  + +++   W  V+  E +V         G
Sbjct: 186 YIKVVRLFGASRAQLFRLVILPASFPVIISALKVNVGLAWIGVIVGEFLV------AKLG 239

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  +    +  +   +L  ++ +  V  +  QL+
Sbjct: 240 LGYLMIYGFQVFNFTLVLSTLIVIAVVATIMYQLV 274



 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   ++  ++ +++   +   + + P +S  + P+  +L + P     PL +  +  
Sbjct: 95  GMTVSETIIGFLLGTLVGTGIAALLWWFPFLSRVLDPYLVVLNSLPKVALGPLFIVTLGP 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       + +  T      N+          + +V   F  +  + +R +ILP  F
Sbjct: 155 GFTSIVAVTLSVTVIIT----TINIYNRFREIEAGYIKVVRLFGASRAQLFRLVILPASF 210

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++      G AW   IV E        +   GLG  +    +  +F  V+  ++++ 
Sbjct: 211 PVIISALKVNVGLAWIGVIVGEFL------VAKLGLGYLMIYGFQVFNFTLVLSTLIVIA 264

Query: 564 CFVLALNRFL 573
                + + +
Sbjct: 265 VVATIMYQLV 274


>gi|294626088|ref|ZP_06704696.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292599624|gb|EFF43753.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 294

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 85/215 (39%), Gaps = 10/215 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L    L +    +   +     + +L  FV   LAA +R    VL  +  +   +P + 
Sbjct: 84  GLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIA 143

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +++F             + +F +  S +W +  + Y     +P  L    R++ L
Sbjct: 144 LLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGL 195

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G +    L +P ++  ++  + +  +  W  ++A+E++    +     G+G YI     
Sbjct: 196 RGPRYVAQLLIPAALSAILSGLKIGWAFAWRTLIAAELVFGATS--GQGGLGWYIFQNRN 253

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           E     +   +  ++ +  L + ++F+ +   + +
Sbjct: 254 ELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVR 288



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 84/271 (30%), Gaps = 9/271 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L       R+  P    +      +    +I    V   + +  A Q+     +    
Sbjct: 28  PALVAATTPTRWQAPPWLRKALVLAVLVAAWEIAARLVGDDLMLPSAGQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P+  +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P      ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALSAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +V  G+ ++    L +   ++  +     R 
Sbjct: 259 KVFAGLAMVIVLGLLVEGVVFQAVERLTVRR 289


>gi|325521537|gb|EGD00340.1| putative binding-protein-dependent transport system protein
           [Burkholderia sp. TJI49]
          Length = 238

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L  YA R  L +  +MV++++       L ++ R        + + +I  +IP L  L  
Sbjct: 38  LTYYAGRHMLLVGYSMVLAIVVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAVLAI 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+F + +  +T + Y+ + N+P  L E ++   ++GWQ
Sbjct: 98  ALGIFGIG--------DVPAIVALFLASLLPITRNTYEGVKNVPAALREAAKGIGMTGWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSG 202
               + +P ++P +V  +  +++ 
Sbjct: 150 SLLRVELPNALPIIVGGVRTALAI 173



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSY 443
           M  V   +++A ++ +P G+ +  RP    + + F Q+       P+     + +     
Sbjct: 46  MLLVGYSMVLAIVVGVPAGVLL-SRPRFQRQAERFMQVFNIGNTIPSLAVLAIALGIFGI 104

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                ++   + +   +   I  N   G    P   +E A    +TGW+    + LP   
Sbjct: 105 G----DVPAIVALFLASLLPITRNTYEGVKNVPAALREAAKGIGMTGWQSLLRVELPNAL 160

Query: 504 PYYVTGAITACGG 516
           P  V G  TA   
Sbjct: 161 PIIVGGVRTALAI 173


>gi|254451371|ref|ZP_05064808.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198265777|gb|EDY90047.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 229

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 15/216 (6%)

Query: 47  DIVDIVPITLDVHSLP-QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             + +    LD   L  + A  T   ++  ++   +     A   A S RL  +++P+L 
Sbjct: 20  SPLRVAQAALDNRVLIAENALVTATEVILGLITGTVLGAFTAVQLANSDRLHRLVMPLLI 79

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
             Q++P+        ++F      KV+ A L   F         +T + Y  L  +P D+
Sbjct: 80  FTQAVPVFALAPILTLWFGYGIASKVVMAVLIIYF--------PVTSAFYDGLTRVPADI 131

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +++++   +  Q    + +P ++P L   + ++       V A    V+G+ V    G+
Sbjct: 132 LDMAKTMGGTKRQIMRRIKIPHALPSLGTGLKLA------AVYAPIGAVIGEWVGASKGL 185

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G  + LA        +  ++ T++ +  L    + +
Sbjct: 186 GYLMLLANGRAKTDLMFASLFTLVAMTLLLSLAVTK 221



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 10/224 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W  +V    +          V      + + +     +T   V++ +I  +++     
Sbjct: 2   LLWQGIVWLTGVPSFILPSPLRVAQAALDNRVLIAENALVTATEVILGLITGTVLGAFTA 61

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +     +   + P      A P     P++     Y   +  +   L++ F     + 
Sbjct: 62  VQLANSDRLHRLVMPLLIFTQAVPVFALAPILTLWFGYGIASKVVMAVLIIYF----PVT 117

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G +  P D  ++A +   T  +  R I +P   P   TG   A   A   +++ E
Sbjct: 118 SAFYDGLTRVPADILDMAKTMGGTKRQIMRRIKIPHALPSLGTGLKLAAVYAPIGAVIGE 177

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                     + GLG  +  +  +     +   +  +    L L
Sbjct: 178 WVG------ASKGLGYLMLLANGRAKTDLMFASLFTLVAMTLLL 215


>gi|212715511|ref|ZP_03323639.1| hypothetical protein BIFCAT_00409 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661593|gb|EEB22168.1| hypothetical protein BIFCAT_00409 [Bifidobacterium catenulatum DSM
           16992]
          Length = 282

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 85/243 (34%), Gaps = 15/243 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR  P +  ++  + V      + +           +    +     +L      T +  
Sbjct: 30  RRSIPTVIAVVLLLAVWETWVRIGNVPSTMIAAPSEIAQATVET-WSTLWPATQVTLIEG 88

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               + ++LF  +   L   SR     L P+L   Q++P++      +++F     GK  
Sbjct: 89  TIGFLFAVLFGILIGILLYCSRIANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGK-- 146

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 147 ------IVIVTVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQI 200

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S  G + F  A+    +G       G+G ++  A        I  A L ++ + 
Sbjct: 201 YGGIRVS--GAYIFATAATAEYLGARK----GLGIWLQAAYNSFRTPLIFSATLVIIVIT 254

Query: 253 FLY 255
            + 
Sbjct: 255 GIL 257



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             VV  +A+   W  IG + +            T +    +     +T+    +  + A 
Sbjct: 37  IAVVLLLAVWETWVRIGNVPSTMIAAPSEIAQATVETWSTLWPATQVTLIEGTIGFLFAV 96

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  I +GI +      ++ + P        P     PL +    +      + +++  +F
Sbjct: 97  LFGILIGILLYCSRIANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGKIVIVTVFGLF 156

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    I G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 157 ----PIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQIYGGIRVSGAYIF 212

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    L++      L
Sbjct: 213 ATAATAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIVITGIL 257


>gi|229543447|ref|ZP_04432507.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229327867|gb|EEN93542.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 268

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   L+  SL  +   T    +   ++  +     A +   S  L  +L P
Sbjct: 55  SSPSKVWALLVAKLEDGSLYVHLGITVFETVMGFILGTVLGAALAAVLWWSPFLSKILDP 114

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V     +   V    + ++           T  +Y +  ++ 
Sbjct: 115 YLVVLNAMPKVALGPILIVSMGPGFSSIVAMGVIISVIV--------TTIVIYTAFRDVD 166

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  SF  S  Q F     P S+P ++  + +++   W  V+  E +V        
Sbjct: 167 PNYTKVLHSFGASRLQVFREAIFPASIPVIISTLKVNVGLAWVGVIVGEYLVSSK----- 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   ++ +M+ +  V  +  QL+
Sbjct: 222 -GLGYMIIYGFQVFNFTLVMLSMILIAIVATIMYQLV 257



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 78/199 (39%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +     IT+F  V+  I+ +++   +   + + P +S  + P+  +L A P     
Sbjct: 69  EDGSLYVHLGITVFETVMGFILGTVLGAALAAVLWWSPFLSKILDPYLVVLNAMPKVALG 128

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+++  +     +      ++ +  T   I+            ++ +V  SF  +  + +
Sbjct: 129 PILIVSMGPGFSSIVAMGVIISVIVTT--IVIYTAF--RDVDPNYTKVLHSFGASRLQVF 184

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R  I P   P  ++      G AW   IV E        + + GLG  I    +  +F  
Sbjct: 185 REAIFPASIPVIISTLKVNVGLAWVGVIVGEYL------VSSKGLGYMIIYGFQVFNFTL 238

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+L ++++      + + +
Sbjct: 239 VMLSMILIAIVATIMYQLV 257


>gi|39935564|ref|NP_947840.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|39649417|emb|CAE27939.1| possible ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 292

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++AF L+  +   +    +     P  I       L   SL   +  T    L   V+  
Sbjct: 47  VVAFFLLWELGVRMGWISEFLVGKPSGIWARFETQLLDGSLFVDSGYTLYEALIGFVVGT 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   V       S  +  ++ P +  + S+P +      +++F            L+ + 
Sbjct: 107 IVGSVLGLAMWYSIFVARMVEPFIVALNSVPKIALAPVILLWFGTGL--------LSKVV 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + +        + YQ+  +  +DL+ +  S   S  Q F+ + VP S+P ++    +++
Sbjct: 159 LVVSMTALVALIAAYQAAKDSDKDLQSLMLSMGGSKHQIFYSVVVPSSLPAIIATFRINI 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQ 257
                  V  E I          G+G  +  A    DL ++   +  ++ + F+      
Sbjct: 219 GFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVWVGLFVLMFMGFVLYHAID 272

Query: 258 LLFRPMIVW 266
            L R ++ W
Sbjct: 273 ALERYLLPW 281



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T++  ++  ++ +I+   +G+ + +   ++  ++PF   L + P     P+
Sbjct: 85  GSLFVDSGYTLYEALIGFVVGTIVGSVLGLAMWYSIFVARMVEPFIVALNSVPKIALAPV 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L+  + +  +         L      A     D + +  S   +  + +  
Sbjct: 145 ILLWFGTGLLSKVVLVVSMTALVA----LIAAYQAAKDSDKDLQSLMLSMGGSKHQIFYS 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G A   ++V E  S         GLG  +  ++       V 
Sbjct: 201 VVVPSSLPAIIATFRINIGFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVW 254

Query: 557 LGVLIMCCFVLAL 569
           +G+ ++      L
Sbjct: 255 VGLFVLMFMGFVL 267


>gi|269795034|ref|YP_003314489.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097219|gb|ACZ21655.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 325

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 97/254 (38%), Gaps = 19/254 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLSAMVIS 79
           +A  L   +  ++L   +   +P     +    LD   L       + T    L+ +VI+
Sbjct: 83  VAIGLWYAMTYLVLPEGRRFLLPPPHQVLTESVLDWSKLEPMLVALALTAQVALTGLVIA 142

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++     A L +++R L   L P   I+Q+IPIL  +    ++F   +  +VI   + A+
Sbjct: 143 VVLGISQAILMSQARWLERSLYPYAVILQTIPILALVPLIGLWFGFGFTSRVIVCVIIAL 202

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F         M  +    + +      ++    + +  Q+ W L +P ++P +   + +S
Sbjct: 203 F--------PMISNTLFGIQSAEPAAHDLFTLNKATRAQRLWKLQMPAAVPSIFAGLKIS 254

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYI----ALAIKEQDLLAILYAMLTMLGVIFLY 255
                   +  +M          PGIGS +    A    E  L AI  A L  + V   +
Sbjct: 255 AGLAVIGAIVGDMF----FRQGAPGIGSLLDVYRARVESENLLTAIGLASLFGVLVFAFF 310

Query: 256 DQLLFRPMIVWSNK 269
             +    +  W  K
Sbjct: 311 TAVDKAVLSRWYGK 324



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 71/203 (34%), Gaps = 8/203 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +  +  ++    +T    +  ++IA ++ I   I +     +   + P+A +L   P 
Sbjct: 116 LDWSKLEPMLVALALTAQVALTGLVIAVVLGISQAILMSQARWLERSLYPYAVILQTIPI 175

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL+     +   +      ++ +    + ++ N + G  +      ++ +    T 
Sbjct: 176 LALVPLIGLWFGFGFTS----RVIVCVIIALFPMISNTLFGIQSAEPAAHDLFTLNKATR 231

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + +P   P    G   + G A   +IV ++           G+G+ +     + 
Sbjct: 232 AQRLWKLQMPAAVPSIFAGLKISAGLAVIGAIVGDMF----FRQGAPGIGSLLDVYRARV 287

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               ++  + +   F + +  F 
Sbjct: 288 ESENLLTAIGLASLFGVLVFAFF 310


>gi|23500040|ref|NP_699480.1| ABC transporter permease [Brucella suis 1330]
 gi|161620361|ref|YP_001594247.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|254702695|ref|ZP_05164523.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|260568398|ref|ZP_05838867.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261753283|ref|ZP_05996992.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|23463628|gb|AAN33485.1| ABC transporter, permease protein [Brucella suis 1330]
 gi|161337172|gb|ABX63476.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260155063|gb|EEW90144.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261743036|gb|EEY30962.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 263

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  + +     + +   IT+   ++   I ++  + +G W   +P +++   P+ +   +
Sbjct: 48  LRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDPYVKAANS 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V  P+    +     +       L+ F     + FNV  G           A    
Sbjct: 108 LPRVVLAPIFALWLGLGIWSKVALGVSLVFFI----VFFNVYQGVKEVNQTVLSNARMLG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +   +  R + LP    +  +   TA G A   ++V +          + GLG  I ++ 
Sbjct: 164 MNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGKYLG------SSAGLGYLIHQAE 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
                  V  G+L++  FVL ++           +W P
Sbjct: 218 GVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRP 255



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P D+           ++  +   T L  + A  I  +   +     A+   L  +  P
Sbjct: 41  ATPGDVALRTYKWFVDGTIWYHLGITLLEAMLAFAIGAVGGVLIGFWFARKPLLAAIFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    S+P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 101 YVKAANSLPRVVLAPIFALWLGLGIWSKVALGVSLVFFIVF--------FNVYQGVKEVN 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +   +R   ++  Q    + +P ++  +  ++  ++       V  + +         
Sbjct: 153 QTVLSNARMLGMNERQLLRNVYLPSALSWMFSSLHTAVGFAVVGAVVGKYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
            G+G  I  A    D+  +   ML +   + L D    ++ + ++VW  K
Sbjct: 208 -GLGYLIHQAEGVFDVTGVFAGMLVLTAFVLLIDWGVSIIEQRLLVWRPK 256


>gi|269861941|ref|XP_002650642.1| taurine transport system permease protein tauC [Enterocytozoon
           bieneusi H348]
 gi|220065841|gb|EED43415.1| taurine transport system permease protein tauC [Enterocytozoon
           bieneusi H348]
          Length = 152

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 60/157 (38%), Gaps = 10/157 (6%)

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P   + PL++      +++    + L++     + +   +  G  +        A + 
Sbjct: 2   AIPPIAWAPLIMIIFGLGYVS----IVLVIFIAAMFPMAVTIQEGVQSIRGGEVRAARTL 57

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+   ++ LP   P+            W A + +E+         + G+G  ++  
Sbjct: 58  GANPWQLLAHVYLPASLPFVTAALRIGFSQGWRALVAAEMIG------ASQGIGWMVSTG 111

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            + G+  +V+LG++++      +  F++  +  +  +
Sbjct: 112 GQIGNSSQVLLGIVLIGLIAWLMESFVFRRIERHYQK 148



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 75/165 (45%), Gaps = 14/165 (8%)

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           +IP + +    ++ F   Y        ++ +  IF + ++ M  ++ + + +I       
Sbjct: 2   AIPPIAWAPLIMIIFGLGY--------VSIVLVIFIAAMFPMAVTIQEGVQSIRGGEVRA 53

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +R+   + WQ   ++ +P S+P +   + +  S GW  +VA+EMI          GIG  
Sbjct: 54  ARTLGANPWQLLAHVYLPASLPFVTAALRIGFSQGWRALVAAEMIGASQ------GIGWM 107

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           ++   +  +   +L  ++ +  + +L +  +FR +     K+R++
Sbjct: 108 VSTGGQIGNSSQVLLGIVLIGLIAWLMESFVFRRIERHYQKWRVQ 152


>gi|218438210|ref|YP_002376539.1| substrate-binding region of ABC-type glycine betaine transporter
           [Cyanothece sp. PCC 7424]
 gi|218170938|gb|ACK69671.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. PCC 7424]
          Length = 512

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 75/200 (37%), Gaps = 12/200 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+  +    +   L +  A+ +++        +  +  +L   ++ + + +Q+IP L   
Sbjct: 3   DLTEIWWRTAEHLLLVALAIGVAIAVGLPLGIVITRYPKLVKPVLGVANGIQTIPSLAIF 62

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F +   +    GK+      AI A+    +  +  + Y  + ++   + E ++   ++ 
Sbjct: 63  GFLLSVPLLGGIGKIP-----AIVALILYALLPIIRNTYTGITSVDPAIREAAKGMGMNE 117

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P ++  ++  + +S        V    I      I   G+G +I   I   
Sbjct: 118 KQILLQVEIPLALGIILAGVRIS-------TVICVGIATIAAAIGGGGLGVFIFRGIATV 170

Query: 237 DLLAILYAMLTMLGVIFLYD 256
           +   IL   +    +  L D
Sbjct: 171 NNQLILAGAIPAAVIALLAD 190



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 72/216 (33%), Gaps = 11/216 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D+  + W     +  V + I +A  + +P+GI I   P +   +   A  +   P+   F
Sbjct: 3   DLTEIWWRTAEHLLLVALAIGVAIAVGLPLGIVITRYPKLVKPVLGVANGIQTIPSLAIF 62

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             ++S      +   +   + +I      I+ N   G ++     +E A    +   +  
Sbjct: 63  GFLLSVPLLGGIG-KIPAIVALILYALLPIIRNTYTGITSVDPAIREAAKGMGMNEKQIL 121

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P      + G   +       + ++     G + +       +I       +   
Sbjct: 122 LQVEIPLALGIILAGVRISTVICVGIATIAAAIGGGGLGV-------FIFRGIATVNNQL 174

Query: 555 VVLGVLIMCCFVLALNRFL-W--HPLYLYGTRCLRL 587
           ++ G +      L  +  + W    L     + LR+
Sbjct: 175 ILAGAIPAAVIALLADGGIGWLEKRLTPPYRQKLRV 210


>gi|326318882|ref|YP_004236554.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375718|gb|ADX47987.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 307

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 85/225 (37%), Gaps = 14/225 (6%)

Query: 23  LAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           LA + V+ ++  L    Q+              +   L    L    + +   +L   + 
Sbjct: 61  LAILAVLAVLWELAARWQDNDLLLPTFLQTARALGEGLASGELVAKTAISLSVLLKGYLA 120

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   FV  TLA  ++    +L  +  +   +P +  L   +++F             + 
Sbjct: 121 GIAGAFVLTTLAVSTQFGRDLLGTLTSMFNPLPAVALLPLALLWFGLGQG--------SL 172

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F +  S +W +  + Y     +P  L    R++ L+G +    + VP ++P ++  + +
Sbjct: 173 VFVLVHSVLWPLALNTYAGFQAVPETLRMAGRNYGLTGIRYVLQILVPAALPAILSGLKI 232

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +  W  ++A+E++    +     G+G YI     E     +  
Sbjct: 233 GWAFAWRTLIAAELVFGASS--GQGGLGWYIFQNRNELYTDKVFA 275



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG  A P   +    ++ +TG R+   I++P   P  ++G  
Sbjct: 172 LVFVLVHSVLWPLALNTYAGFQAVPETLRMAGRNYGLTGIRYVLQILVPAALPAILSGLK 231

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G++++    L +  
Sbjct: 232 IGWAFAWRTLIAAELVFGASS--GQGGLGWYIFQNRNELYTDKVFAGLVLVILIGLLVEG 289

Query: 572 FLWHPLYLYGTRC 584
             +  L     R 
Sbjct: 290 LGFQTLERLTVRR 302


>gi|269926328|ref|YP_003322951.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
 gi|269789988|gb|ACZ42129.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 246

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 17/251 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L++  + +   G+ +T +P     +  +      L      T L     + IS++
Sbjct: 7   FIILMLLVWEVYVRAAGVDQTVLPSPSRIVAALWYARSDLLNNTLYTLLETAIGLTISII 66

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L   S+ +   L P+L + Q+IP++      V++F      KVI   L   F 
Sbjct: 67  VGSFLAILIDISKLVDRTLYPVLVVSQTIPMVALAPLLVLWFGFGLAPKVIVVVLVTFFP 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + V          L +  R+L ++ ++   +  Q    + +P S+P L   + + ++
Sbjct: 127 IVVAMV--------DGLRSTDRELIKLLKTMGANRLQTLTKVQLPASLPYLFSGIKVGVT 178

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258
            G   V+ +   + G+ V    G+G  I  A        +  A+     +   +F    L
Sbjct: 179 YG---VIGA---IFGEYVGAYQGLGILIQTAKNSFRTDLVFAAICVTALLSIGLFWLTNL 232

Query: 259 LFRPMIVWSNK 269
           + R +I W  K
Sbjct: 233 VERKLIPWHAK 243



 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 10/179 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + I+ I+   + I I     +   + P   +    P     PL+V    +       
Sbjct: 58  AIGLTISIIVGSFLAILIDISKLVDRTLYPVLVVSQTIPMVALAPLLVLWFGFGLAPK-- 115

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++  T + I+  ++ G  +   +  ++  +      +    + LP   PY  +G 
Sbjct: 116 --VIVVVLVTFFPIVVAMVDGLRSTDRELIKLLKTMGANRLQTLTKVQLPASLPYLFSGI 173

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                     +I  E            GLG  I  +        V   + +     + L
Sbjct: 174 KVGVTYGVIGAIFGEYVG------AYQGLGILIQTAKNSFRTDLVFAAICVTALLSIGL 226


>gi|188994723|ref|YP_001928975.1| probable ABC transporter permease protein [Porphyromonas gingivalis
           ATCC 33277]
 gi|188594403|dbj|BAG33378.1| probable ABC transporter permease protein [Porphyromonas gingivalis
           ATCC 33277]
          Length = 249

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 75/186 (40%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+V+ I IA ++   V + +    +    +  F       P     P+++     
Sbjct: 57  MASLLRIVIGISIALVLGFMVALSMFRYKNFGRVMDSFVYFCYPIPKLALLPIIMLLAGL 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   + + L++IF        N+         +   V +S   T  +  R++ILP I 
Sbjct: 117 GDVTKIIMIVLIIIFQII----VNLRDSLRNISKESFLVLTSLGATHAQLMRHLILPAIT 172

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++    A G A +   V+E       +    G+G +I ++  + S+ E+ +G++++ 
Sbjct: 173 PEALSTLRVAIGTAISVLFVTE------TYGTNKGMGFFIVDAWMRISYTEMYVGIVVLG 226

Query: 564 CFVLAL 569
                L
Sbjct: 227 MAGFFL 232



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+  +   + LR++  + I+L+  F+ A    + +  G V+   +     IP L  L  
Sbjct: 50  QSMSAHLMASLLRIVIGISIALVLGFMVALSMFRYKNFGRVMDSFVYFCYPIPKLALLPI 109

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++             ++  I  I    ++ +  ++  SL NI ++   V  S   +  Q
Sbjct: 110 IMLLAGLG--------DVTKIIMIVLIIIFQIIVNLRDSLRNISKESFLVLTSLGATHAQ 161

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              +L +P   P  +  + +++        A  ++ V +T     G+G +I  A      
Sbjct: 162 LMRHLILPAITPEALSTLRVAIG------TAISVLFVTETYGTNKGMGFFIVDAWMRISY 215

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +   ++ +    F    L+
Sbjct: 216 TEMYVGIVVLGMAGFFLFLLV 236


>gi|118589847|ref|ZP_01547251.1| putative ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437344|gb|EAV43981.1| putative ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 273

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R+   + +++++ +  GI IGF PH+ S + P+    +  P     P++        
Sbjct: 78  SLWRLGTGMAVSTLLALSFGIAIGFIPHVRSALAPYLATFSLIPPITILPILFITFGLGE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L        L++ GT   ++ +        P +    A +   + W+    ++LP + P+
Sbjct: 138 L----AKIALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMVTRLVLPQVLPH 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +T    +   AW   I +E  +       T+GLG  I       +   ++  V+ + 
Sbjct: 194 LITSLRLSLVPAWIFLISAEAIA------STSGLGYRIFLVRRYLAMDVILPYVVWIT 245



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 14/188 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   +  +  R+ + M +S L    +         +   L P L     IP +  L    
Sbjct: 71  LWLDSFDSLWRLGTGMAVSTLLALSFGIAIGFIPHVRSALAPYLATFSLIPPITILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           ELA I  I       M  S  Q++ +IPR++   + +   S WQ  
Sbjct: 131 ITFGLG--------ELAKIALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMV 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P  +P L+ ++ +S+   W F++++E I          G+G  I L  +   +  
Sbjct: 183 TRLVLPQVLPHLITSLRLSLVPAWIFLISAEAIA------STSGLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTM 248
           IL  ++ +
Sbjct: 237 ILPYVVWI 244


>gi|331702353|ref|YP_004399312.1| glycine betaine ABC transporter periplasmic protein [Lactobacillus
           buchneri NRRL B-30929]
 gi|329129696|gb|AEB74249.1| ABC-type glycine betaine transport, periplasmic subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 507

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 62/146 (42%), Gaps = 8/146 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +  ++ Q   +     L A++I+++     A       ++G ++  I  ++Q+IP L
Sbjct: 9   VDKNAAAIIQALWQHIEISLIAILITIVIAIPLAICLVNRPKIGEIISQIAGVIQTIPSL 68

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             + AI A+    +  +  + Y  L +I   L E + +  
Sbjct: 69  AVLGILIPFVGIG--------TVPAIIALVLYAIMPIFQNTYAGLTHIDPVLLEAADALG 120

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS 199
           ++   K + + +P +MP ++  + ++
Sbjct: 121 VTKRFKLFRIELPLAMPMILSGIRIA 146



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 4/123 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I+I  +I IP+ I +  RP I   I   A ++   P+     +++  V    +   +
Sbjct: 28  LIAILITIVIAIPLAICLVNRPKIGEIISQIAGVIQTIPSLAVLGILIPFVGIGTVPAII 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  I      I  N  AG +       E A +  +T       I LP   P  ++G 
Sbjct: 88  ALVLYAIM----PIFQNTYAGLTHIDPVLLEAADALGVTKRFKLFRIELPLAMPMILSGI 143

Query: 511 ITA 513
             A
Sbjct: 144 RIA 146


>gi|239625705|ref|ZP_04668736.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519935|gb|EEQ59801.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 275

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 76/215 (35%), Gaps = 15/215 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +      +     +T+   +V   + ++  +   + +     ++  ++PF  LL + P 
Sbjct: 72  VSMTRDGSLFLHTGVTLLETLVSFALCTVFGLACALLLWSSKSVAQVLEPFLVLLNSLPK 131

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +        +    + +FG+    +  +  G +    +  ++  S     
Sbjct: 132 SALAPLLIVWLGNNMKTIIVAAVSVAVFGS----ILTLYTGFTQMDTEKIKLIYSLGGNR 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LPG  P  ++      G      I+ E  S         GLG  I   ++  
Sbjct: 188 KDVLVKVLLPGSLPMLISNMKVNIGLCLVGVIIGEFLS------AKAGLGYLITYGSQTF 241

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +   VV  ++I+C     L + +      Y  + +
Sbjct: 242 AMTMVVTSIVILCIVSGVLYQII-----AYAEKRI 271



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I   +       SL  +   T L  L +  +  +F    A L   S+ +  VL P
Sbjct: 62  SSPTMIAKCLVSMTRDGSLFLHTGVTLLETLVSFALCTVFGLACALLLWSSKSVAQVLEP 121

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  N     ++ A   A+F            ++Y     + 
Sbjct: 122 FLVLLNSLPKSALAPLLIVWLGNNMKTIIVAAVSVAVFGSI--------LTLYTGFTQMD 173

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++  S   +       + +P S+P L+ NM +++      V+  E +         
Sbjct: 174 TEKIKLIYSLGGNRKDVLVKVLLPGSLPMLISNMKVNIGLCLVGVIIGEFLSAKA----- 228

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   +  ++ +++ +  V  +  Q++
Sbjct: 229 -GLGYLITYGSQTFAMTMVVTSIVILCIVSGVLYQII 264


>gi|89068073|ref|ZP_01155490.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
 gi|89046312|gb|EAR52369.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
          Length = 258

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 15/257 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            P F           +   +L+      +L        P  +V  +   +    L +  +
Sbjct: 5   RPRFRQGAGLAEWISIPLLLLIWHAAATILQDPT-VPSPVAVVAELVAQVVDGRLLEDFA 63

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T  R+ +A  +S+L       L  + R    +  P + I  +IP +       ++    
Sbjct: 64  KTLARVAAAFAVSMLLGCAIGALLGRVRFADGLFAPWIVIGLNIPAIVVAIVCYIWMGL- 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  +E+A + A+  ++   +  +M + +  +  +  E+++ +R+S W++   + +P
Sbjct: 123 -------SEIALVTAVAINKTPLVATTMREGVRALSAEYRELAQVYRMSPWRRLRLVELP 175

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             MP L+      +S  W  V+  E++          G+G  I +     D+ AIL   L
Sbjct: 176 QLMPYLLTAARTGLSLIWKIVLVFEVLGSDG------GVGFRIGIFFGFFDMTAILAYTL 229

Query: 247 TMLGVIFLYDQLLFRPM 263
             + V+F  +    RP+
Sbjct: 230 AFICVVFAVEYGAMRPL 246



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 76/238 (31%), Gaps = 10/238 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              +L + W      +        +  +           ++     T+ RV     ++ +
Sbjct: 19  SIPLLLLIWHAAATILQDPTVPSPVAVVAELVAQVVDGRLLEDFAKTLARVAAAFAVSML 78

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +G  +G          P+  +    PA V   +    +        + L   +   
Sbjct: 79  LGCAIGALLGRVRFADGLFAPWIVIGLNIPAIVVAIVCYIWMGLS----EIALVTAVAIN 134

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +   +  G  A   +++E+A  + ++ WR  R + LP + PY +T A T     W 
Sbjct: 135 KTPLVATTMREGVRALSAEYRELAQVYRMSPWRRLRLVELPQLMPYLLTAARTGLSLIWK 194

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
             +V EV           G+G  I           ++   L   C V A+      PL
Sbjct: 195 IVLVFEVLG------SDGGVGFRIGIFFGFFDMTAILAYTLAFICVVFAVEYGAMRPL 246


>gi|192291156|ref|YP_001991761.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284905|gb|ACF01286.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 292

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++AF L+  +   +    +     P  I       L   SL   +  T    L   V+  
Sbjct: 47  VVAFFLLWELGVRMGWISEFLVGKPSGIWARFETQLLDGSLFVDSGYTLYEALIGFVVGT 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   V       S  +  ++ P +  + S+P +      +++F            L+ + 
Sbjct: 107 IVGSVLGLAMWYSIFVARMVEPFIVALNSVPKIALAPVILLWFGTGL--------LSKVV 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + +        + YQ+  +  +DL+ +  S   S  Q F+ + VP S+P ++    +++
Sbjct: 159 LVVSMTALVALIAAYQAAKDSDKDLQSLMLSMGGSKHQIFYSVVVPSSLPAIIATFRINI 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQ 257
                  V  E I          G+G  +  A    DL ++   +  ++ + F+      
Sbjct: 219 GFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVWVGLFVLMFMGFVLYHAID 272

Query: 258 LLFRPMIVW 266
            L R ++ W
Sbjct: 273 ALERYLLPW 281



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T++  ++  ++ +I+   +G+ + +   ++  ++PF   L + P     P+
Sbjct: 85  GSLFVDSGYTLYEALIGFVVGTIVGSVLGLAMWYSIFVARMVEPFIVALNSVPKIALAPV 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L+  + +  +         L      A     D + +  S   +  + +  
Sbjct: 145 ILLWFGTGLLSKVVLVVSMTALVA----LIAAYQAAKDSDKDLQSLMLSMGGSKHQIFYS 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P  +       G A   ++V E  S         GLG  +  ++       V 
Sbjct: 201 VVVPSSLPAIIATFRINIGFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVW 254

Query: 557 LGVLIMCCFVLAL 569
           +G+ ++      L
Sbjct: 255 VGLFVLMFMGFVL 267


>gi|86609983|ref|YP_478745.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558525|gb|ABD03482.1| ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 265

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 88/238 (36%), Gaps = 5/238 (2%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L++ +   V  +  + W   V    +         +V     +D   +     IT+   V
Sbjct: 9   LEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSLLITVQITV 68

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V  + A++  + V I       I     P+A +L   P     PL++  +        + 
Sbjct: 69  VAFLAATVSGLLVAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRNNTFAAMVV 128

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            + ++     + IL N   G ++  ++   +   +    W+   Y+ LP   PY++ G  
Sbjct: 129 CAWIV---AFFPILSNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSAMPYFMGGLR 185

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            + G +   ++V+E  +      +  G+   I  S+     P +   ++++    + +
Sbjct: 186 ISGGLSLIGAVVAEFVAG--TGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGILI 241



 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 94/249 (37%), Gaps = 13/249 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              LV   + + + G+    +P  I+ +  +  D  +L      T    + A + + +  
Sbjct: 19  ILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSLLITVQITVVAFLAATVSG 78

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A +  +S+ +     P   I+Q++PI+      +++  N           A +   +
Sbjct: 79  LLVAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRNN-------TFAAMVVCAW 131

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + +  +    L ++  +L  + + ++ + WQ   YL +P +MP  +  + +S    
Sbjct: 132 IVAFFPILSNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSAMPYFMGGLRISGGLS 191

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL----YDQLL 259
               V +E   V  T     GI   I ++     +  +  A++ + G+  L       L 
Sbjct: 192 LIGAVVAEF--VAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGILIFISLSALS 249

Query: 260 FRPMIVWSN 268
            R +  W  
Sbjct: 250 DRVLGKWHE 258


>gi|330836323|ref|YP_004410964.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta coccoides DSM 17374]
 gi|329748226|gb|AEC01582.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta coccoides DSM 17374]
          Length = 271

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 83/233 (35%), Gaps = 11/233 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-CITMFRVVVLIIIAS 398
            +    + W+         I   S   +     +       WL   ++   V   ++   
Sbjct: 32  SAIFWILVWYAAYRLTGQDILVASPSRVAGRLWFLAGTSSFWLTVLVSFLHVAEGLVTGC 91

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  I + +           ++P   ++ A P   F  L +  +    + P   +++LM+ 
Sbjct: 92  VAGIVLAVLTWRCRLCDIVVRPAIGIIKAAPVTSFIILALFWLGRESVAP--LITMLMVL 149

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W    NV  G      +   +A ++     +  R++I+P + PY++    +A G AW
Sbjct: 150 PIVWG---NVTEGLGTLDRNLMVMARTYRFGRGKTLRFVIVPSLMPYFIAALSSAIGFAW 206

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A I +E+ +     +     G  I ++       ++    +++    + L +
Sbjct: 207 KAGIAAELLANDGRAV-----GGRINQAKIYLETEDLFAWTIVVIVLSIILEK 254



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 18/262 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I       + ++LV      L         P  +   +       S       + L +  
Sbjct: 26  ILRGAISAIFWILVWYAAYRLTGQDILVASPSRVAGRLWFLAGTSSFWLTVLVSFLHVAE 85

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +V   +   V A L  + R   +V+ P + I+++ P+  F+   + +         +G 
Sbjct: 86  GLVTGCVAGIVLAVLTWRCRLCDIVVRPAIGIIKAAPVTSFIILALFW---------LGR 136

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E  A        +  +  ++ + L  + R+L  ++R++R    +   ++ VP  MP  + 
Sbjct: 137 ESVAPLITMLMVLPIVWGNVTEGLGTLDRNLMVMARTYRFGRGKTLRFVIVPSLMPYFIA 196

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++   W   +A+E++            G  +   I +  +      +     V+ +
Sbjct: 197 ALSSAIGFAWKAGIAAELLAND---------GRAVGGRINQAKIYLETEDLFAWTIVVIV 247

Query: 255 YDQLLFRPMIVWSNKFRLERTT 276
              +L +  + +  + R+    
Sbjct: 248 LSIILEKSTVHFLGRVRMTEAE 269


>gi|55821315|ref|YP_139757.1| choline/proline/glycine betaine ABC uptake transporter
           membrane-spanning protein [Streptococcus thermophilus
           LMG 18311]
 gi|55823227|ref|YP_141668.1| proline/glycine betaine ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|55737300|gb|AAV60942.1| choline/proline/glycine betaine ABC uptake transporter
           membrane-spanning protein [Streptococcus thermophilus
           LMG 18311]
 gi|55739212|gb|AAV62853.1| proline/glycine betaine ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 219

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 5/181 (2%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA +I  P+G     +P +      F Q L   P+     +++  +    L   + L
Sbjct: 31  ALMIALVIGFPLGYLSYSKPKLRQAASFFTQGLRVIPSLGLLFILIPFIGVGRLPAIIAL 90

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L I      IL N I G +  P    E A+   +T W+    + LP   P+ + G   
Sbjct: 91  VFLAIP----PILLNTIVGFNEVPQSLIETATGLGMTKWQKLYKVSLPLASPHILNGIKL 146

Query: 513 ACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           A      +A++ + + + G   +  TGLG Y  +    G     +L  + M  F L ++R
Sbjct: 147 ALIEVIASATLATYIGAGGLGTIIFTGLGLYRYDLLIIGGGSVALLSFISMILFDLLISR 206

Query: 572 F 572
            
Sbjct: 207 L 207



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 19/203 (9%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++I+L+  F    L+    +L          ++ IP LG L   + +            
Sbjct: 31  ALMIALVIGFPLGYLSYSKPKLRQAASFFTQGLRVIPSLGLLFILIPFIGVG-------- 82

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L AI A+    +  +  +       +P+ L E +    ++ WQK + + +P + P ++ 
Sbjct: 83  RLPAIIALVFLAIPPILLNTIVGFNEVPQSLIETATGLGMTKWQKLYKVSLPLASPHILN 142

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVI 252
            + +++      V+AS  +    T I   G+G+ I   +     DLL I    + +L  I
Sbjct: 143 GIKLAL----IEVIASATLA---TYIGAGGLGTIIFTGLGLYRYDLLIIGGGSVALLSFI 195

Query: 253 --FLYDQLLFRPMIVWSNKFRLE 273
              L+D L+ R  I    K   E
Sbjct: 196 SMILFDLLISRLPIEKHKKRSYE 218


>gi|110678119|ref|YP_681126.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109454235|gb|ABG30440.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 247

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 87/231 (37%), Gaps = 14/231 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VLV+    I   G+    +P   +    I      L ++A  T   +L  +V+     F
Sbjct: 13  LVLVLWQTVIWATGVARFILPPPALVGQTIWESRALLTEHALVTMAEVLIGLVLGAALGF 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V A     S     ++ PIL   Q++P+        ++       KV  A +   F    
Sbjct: 73  VSAIGLVASPTARALVRPILVFSQAVPVFALAPILTLWLGFGLWSKVTMAIIIIYF---- 128

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +T S + +L    RD   +++    S  +  W++ +P ++PG    + ++     
Sbjct: 129 ----PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWHIRIPAALPGFASGLRLA----- 179

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             V A    ++G+ V    G+G  + LA        +  A++ +  +  L 
Sbjct: 180 -AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILL 229



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  V+    +         +V    ++    +     +TM  V++ +++ + +  
Sbjct: 13  LVLVLWQTVIWATGVARFILPPPALVGQTIWESRALLTEHALVTMAEVLIGLVLGAALGF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I +   P   + ++P      A P     P++   + +   +      +++ F    
Sbjct: 73  VSAIGLVASPTARALVRPILVFSQAVPVFALAPILTLWLGFGLWSKVTMAIIIIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +          D+  +A     +  R   +I +P   P + +G   A   A   +I
Sbjct: 129 PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWHIRIPAALPGFASGLRLAAVYAPIGAI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          + GLG  +  +  +     +   ++++    + L
Sbjct: 189 IGEWVG------ASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILL 229


>gi|307942259|ref|ZP_07657610.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307774545|gb|EFO33755.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 307

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 9/225 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +         +        SL  +   T    L   +I      + A     SR
Sbjct: 77  VLPAPHQVAQEIWKTTVEKKVTSKRSLVYHTGITLSSTLLGFLIGTTLGILLAVGIVHSR 136

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L   ++P +   Q+IPIL      +V    +    ++   + + +  F    + +T  M
Sbjct: 137 VLDKSMMPWVISSQTIPILAIAPMIIVVLNAVGISGLLPKAMISTYLSF----FPVTVGM 192

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +      ++  ++  + WQ FW L +P+++P L  +M + M+      +  E+  
Sbjct: 193 VKGLRSPEVIHMDLMHTYSATRWQTFWKLRLPYAVPYLFTSMKIGMAASLVGAIVGEL-- 250

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  + G+G+ +         + I  A+L    +      L+
Sbjct: 251 ---PTGAVAGLGARLLAGSYYGQTVQIWSALLMAAFLAGALVALI 292



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 77/196 (39%), Gaps = 5/196 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++  +I + + I + + I     +   + P+       P     P++
Sbjct: 102 SLVYHTGITLSSTLLGFLIGTTLGILLAVGIVHSRVLDKSMMPWVISSQTIPILAIAPMI 161

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + +   ++ G  +      ++  ++  T W+ +  +
Sbjct: 162 IVVLNAVGISGLLPKAMISTYLSFFPVTVGMVKGLRSPEVIHMDLMHTYSATRWQTFWKL 221

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY  T        +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 222 RLPYAVPYLFTSMKIGMAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIWS 276

Query: 558 GVLIMCCFVLALNRFL 573
            +L+      AL   +
Sbjct: 277 ALLMAAFLAGALVALI 292


>gi|26987607|ref|NP_743032.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24982285|gb|AAN66496.1|AE016278_7 glycine betaine/carnitine/choline ABC transporter, permease
           protein, putative [Pseudomonas putida KT2440]
          Length = 247

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 89/247 (36%), Gaps = 30/247 (12%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M       P +++R    +    A ++++ ++                + I  I      
Sbjct: 1   MLADYTRSPPVAKRYGKGLLGWAAVLVILALLV-------------HWIGIDTIARYRDD 47

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L  Y     + +L++M  +L          ++  R+      +   ++  +IP L  L  
Sbjct: 48  LGFYLQAHLVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAI 107

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                 AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q
Sbjct: 108 ALSILGIGAGP--------AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQ 159

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + W + +P ++P +V  + +++        A    ++G        +GS I   I   + 
Sbjct: 160 QLWQVELPNAVPIIVGGVRVAL--ALNVGTAPLAFLIGANS-----LGSLIFPGIALNNQ 212

Query: 239 LAILYAM 245
             +L   
Sbjct: 213 PQLLLGA 219



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 18/234 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            ++ +     +      + W  V+  +A+ + W  I  I     Y+D L       + + 
Sbjct: 3   ADYTRSPPVAKRYGKGLLGWAAVLVILALLVHWIGIDTIAR---YRDDLGFYLQAHLVL- 58

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            V+  +  A  + IP GI +     +        F  +    P      + +S +     
Sbjct: 59  -VLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG 117

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +   +   I+ N   G    P   KE A+   +T  +    + LP   P  
Sbjct: 118 ----PAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPII 173

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           V G   A       + ++ +            LG+ I       + P+++LG  
Sbjct: 174 VGGVRVALALNVGTAPLAFLIG-------ANSLGSLIFPGIALNNQPQLLLGAA 220


>gi|295397621|ref|ZP_06807696.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Aerococcus viridans ATCC
           11563]
 gi|294974084|gb|EFG49836.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Aerococcus viridans ATCC
           11563]
          Length = 221

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 80/200 (40%), Gaps = 16/200 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     R  L     +V +++         A  R+    ++ + +I+Q++P L  L+  V
Sbjct: 24  LLSQFFRQLLMTSYGVVFAIIVAVPLGFFIAHKRKTSSFILGLANIIQTVPNLALLS-VV 82

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  M L P  V       +F IF   +  +  + Y  + ++   + +V +   ++ WQ  
Sbjct: 83  MLVMGLGPNLV-------VFTIFLYSILPILRNTYTGVISVDDTMVDVGKGMGMTPWQVI 135

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-LL 239
           + + +P ++  ++  +  +   G         I    T +   G+G  +   +   D   
Sbjct: 136 YKVELPLALSVIMGGIRNAFITGI-------GISTIGTFVGAGGLGDVLQRGVNASDGTS 188

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A++ +  +  L D LL
Sbjct: 189 IIIAAVIPISLMSILADWLL 208



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 12/201 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+ +Y++      +      ++ A I+ +P+G +I  +   SS I   A ++   P    
Sbjct: 19  QNGMYLLSQFFRQLLMTSYGVVFAIIVAVPLGFFIAHKRKTSSFILGLANIIQTVPNLAL 78

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +V+  +          +   +   +   IL N   G  +  +   +V     +T W+ 
Sbjct: 79  LSVVMLVMGLGPN----LVVFTIFLYSILPILRNTYTGVISVDDTMVDVGKGMGMTPWQV 134

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-F 552
              + LP      + G   A       S +      G       GLG  +          
Sbjct: 135 IYKVELPLALSVIMGGIRNAFITGIGISTIGTFVGAG-------GLGDVLQRGVNASDGT 187

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             ++  V+ +    +  +  L
Sbjct: 188 SIIIAAVIPISLMSILADWLL 208


>gi|262381424|ref|ZP_06074562.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296601|gb|EEY84531.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 452

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 82/236 (34%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+ R V+ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRGVLGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFLYSGLASATG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    S PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFISVPELLAWTIVAVFISFFFDK 234



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T LR 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  VLGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASATGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFISVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|327440570|dbj|BAK16935.1| ABC-type proline/glycine betaine transport systems, permease
           component [Solibacillus silvestris StLB046]
          Length = 215

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 80/191 (41%), Gaps = 19/191 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            SA+++ ++       L +K++ +  +++ +  ++Q++P L  L   + +          
Sbjct: 24  FSALLLGVIIAVPLGILLSKTKTVAKIVLTVTSVLQTVPSLALLAIMIPFLGVG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             ++ AIFA+    +  +  + +  + ++ ++++    +  ++  Q    + +P +MP +
Sbjct: 78  --KVPAIFALCIYSLLPILNNTFIGMQSVNQNIKAAGTAMGMTPLQSMRMVELPLAMPII 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +  +          + A  +I      + I   G+G +I   +       I+   L +  
Sbjct: 136 MSGIR---------LCAVYVISWATLASYIGAGGLGDFIFNGLNLYKTELIVGGALIVTA 186

Query: 251 VIFLYDQLLFR 261
           +  L D LL R
Sbjct: 187 LALLVDFLLSR 197



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +     +++  II +P+GI +     ++  +     +L   P+     +++  +     
Sbjct: 20  FYISFSALLLGVIIAVPLGILLSKTKTVAKIVLTVTSVLQTVPSLALLAIMIPFLGVG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +     +   +   IL N   G  +   + K   ++  +T  +  R + LP   P  
Sbjct: 78  --KVPAIFALCIYSLLPILNNTFIGMQSVNQNIKAAGTAMGMTPLQSMRMVELPLAMPII 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G         + + ++     G       GLG +I           +V G LI+    
Sbjct: 136 MSGIRLCAVYVISWATLASYIGAG-------GLGDFIFNGLNLYKTELIVGGALIVTALA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LLVDFLL 195


>gi|217978740|ref|YP_002362887.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217504116|gb|ACK51525.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 272

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ + + I+ + + V          L ++L P + ++  IP L  L    
Sbjct: 71  LWSDTLASLTRLCAGLAIATVTSCVIGLTVGLLPYLRVLLTPFIAVLSMIPPLAILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E + I  I       MT  +   +  +P +    +++   + WQ  
Sbjct: 131 IMFGLG--------EASKIVLIVIGIAPFMTRDLALRVSELPAEQLIKAQTLGATTWQIL 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  MP L+ ++ +S+   W +++A+E I          G+G  I L  +   +  
Sbjct: 183 TRVVAPQMMPRLIDSVRLSLGAAWLYLIAAEAIA------SESGLGFRIFLMRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  +  +  + FL+D +L R
Sbjct: 237 ILPYVAWITFLAFLFDFILRR 257



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 73/194 (37%), Gaps = 11/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + IA++    +G+ +G  P++   + PF  +L+  P     P++      
Sbjct: 76  LASLTRLCAGLAIATVTSCVIGLTVGLLPYLRVLLTPFIAVLSMIPPLAILPILFIMFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +L++ G   ++  ++    S  P +    A +   T W+    ++ P + 
Sbjct: 136 GEASK----IVLIVIGIAPFMTRDLALRVSELPAEQLIKAQTLGATTWQILTRVVAPQMM 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +        +GLG  I       +   ++  V  + 
Sbjct: 192 PRLIDSVRLSLGAAWLYLIAAEAIA------SESGLGFRIFLMRRYLAMDVILPYVAWIT 245

Query: 564 CFVLALNRFLWHPL 577
                 + F+   L
Sbjct: 246 FLAFLFD-FILRRL 258


>gi|241888760|ref|ZP_04776066.1| putative ABC transporter permease protein [Gemella haemolysans ATCC
           10379]
 gi|241864436|gb|EER68812.1| putative ABC transporter permease protein [Gemella haemolysans ATCC
           10379]
          Length = 258

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  ++  T L  +  + + ++  ++ A +          + P+L + Q+IP +      V
Sbjct: 52  LIFHSKITLLEAIIGLFLGIVIAWLLALIMDSIPIFNKSIYPLLVLTQTIPTIAIAPILV 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K        I  I  +  + +  S+     N  +D+  + +    S  Q  
Sbjct: 112 LWLGYGLTPK--------IVLIVLTTTFPIVVSILDGFRNCDKDMITLLQLMNASKLQIL 163

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W++ +P S+      + +S+S  +   V +E +          G+G Y+  A K  +   
Sbjct: 164 WHVKIPTSLSYFYAGLRVSVSYAFIAAVVAEWLGG------FEGLGVYMIKAKKLFEYDT 217

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   ++ +  +  L  +L+
Sbjct: 218 MFAIIILVSVISLLSIELV 236



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I+   IT+   ++ + +  +I   + + +   P  +  I P   L    P     P++V
Sbjct: 52  LIFHSKITLLEAIIGLFLGIVIAWLLALIMDSIPIFNKSIYPLLVLTQTIPTIAIAPILV 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + Y          +L++  T + I+ +++ G      D   +    + +  +   ++ 
Sbjct: 112 LWLGYGLTPK----IVLIVLTTTFPIVVSILDGFRNCDKDMITLLQLMNASKLQILWHVK 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    Y+  G   +   A+ A++V+E            GLG Y+ ++ +   +  +   
Sbjct: 168 IPTSLSYFYAGLRVSVSYAFIAAVVAEWLGGFE------GLGVYMIKAKKLFEYDTMFAI 221

Query: 559 VLIMCCFVLALNRFL 573
           ++++    L     +
Sbjct: 222 IILVSVISLLSIELV 236


>gi|169826967|ref|YP_001697125.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           sphaericus C3-41]
 gi|168991455|gb|ACA38995.1| Putative aliphatic sulfonates transport permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 264

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L  +   T +  +   +   L   + A L   S  L  VL P L I+ ++P +     
Sbjct: 66  GTLTLHVGVTLMETVIGFIAGTLLGTLIAILLWWSPFLSKVLDPYLVILNAMPKVALGPI 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V      PG      + A+ +I  +     T  +Y +   +  +  +V ++F  + WQ
Sbjct: 126 LIVALG---PGYFSIIAMGALISIIIT-----TIVVYTAFKGVDPNYSKVLQTFGATRWQ 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S P ++  + +++   W  V+  E +V         G+G  I    +  + 
Sbjct: 178 IFREVILPASFPTIISTLKVNVGLSWVGVIVGEFLVASK------GLGYLIIYGFQVFNF 231

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L +     +  Q++
Sbjct: 232 NLVLMSLLIIAFFATIMYQVV 252



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   V+  I  +++   + I + + P +S  + P+  +L A P     P+
Sbjct: 66  GTLTLHVGVTLMETVIGFIAGTLLGTLIAILLWWSPFLSKVLDPYLVILNAMPKVALGPI 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +   + +    +  +    +       V         ++ +V  +F  T W+ +R 
Sbjct: 126 LIVALGPGYFS----IIAMGALISIIITTIVVYTAFKGVDPNYSKVLQTFGATRWQIFRE 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP  FP  ++      G +W   IV E        + + GLG  I    +  +F  V+
Sbjct: 182 VILPASFPTIISTLKVNVGLSWVGVIVGEFL------VASKGLGYLIIYGFQVFNFNLVL 235

Query: 557 LGVLIMCCFVLAL 569
           + +LI+  F   +
Sbjct: 236 MSLLIIAFFATIM 248


>gi|218671314|ref|ZP_03520984.1| putative permease component of ABC transporter protein [Rhizobium
           etli GR56]
          Length = 264

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I+++  + +G+ IG  P++ + + PF  +++  P     P++   +  
Sbjct: 68  AASLVRLFAGLGISTVTALVIGMLIGMLPYLRALLSPFVAVVSMVPPLALLPILFIAMGL 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G    ++ ++   A   P +    A +   + W+    ++LP I 
Sbjct: 128 GEASK----IALIAIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRVVLPQIL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G AW   I +E  S        +GLG  I       S   +   V+ + 
Sbjct: 184 PRLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDVIFPYVVWIT 237

Query: 564 CFVLALNRFL 573
              + +N  L
Sbjct: 238 LLAVVMNYIL 247



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 14/205 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + + +R+ + + IS +   V   L      L  +L P + ++  +P L  L    
Sbjct: 63  LWSDTAASLVRLFAGLGISTVTALVIGMLIGMLPYLRALLSPFVAVVSMVPPLALLPILF 122

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 123 IAMGLG--------EASKIALIAIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 174

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 175 LRVVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDV 228

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           I   ++ +  +  + + +L R  I 
Sbjct: 229 IFPYVVWITLLAVVMNYILDRIRIA 253


>gi|148545450|ref|YP_001265552.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148509508|gb|ABQ76368.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
          Length = 287

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 98/251 (39%), Gaps = 14/251 (5%)

Query: 23  LAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
              +LVI ++   +   Q+              +   +    LP     + + +L   V+
Sbjct: 41  AVILLVIAVLWEAVARYQDNDLLLPSFLQTATALWDGMISGELPAKVGVSLVILLKGYVL 100

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++  F   +LA  ++    +L  +  +   +P +  L   +++F           + + 
Sbjct: 101 GIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPLALLWFGLG--------DNSL 152

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +  S +W +  + Y     +   L    R++ L G +   ++ VP ++P ++  + +
Sbjct: 153 IFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHILVPAALPSILSGLKI 212

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L
Sbjct: 213 GWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEGL 270

Query: 259 LFRPMIVWSNK 269
           +F  +   + +
Sbjct: 271 VFNTLERLTVR 281



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R   +I++P   P  ++G  
Sbjct: 152 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHILVPAALPSILSGLK 211

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 212 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEG 269

Query: 572 FLWHPLYLYGTRC 584
            +++ L     R 
Sbjct: 270 LVFNTLERLTVRR 282


>gi|299534624|ref|ZP_07047956.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           fusiformis ZC1]
 gi|298729997|gb|EFI70540.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus
           fusiformis ZC1]
          Length = 264

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +       +   SL  + S T +  +   +   L   + A +   S  L  VL P
Sbjct: 50  SSPTHVWHTFIEKVSDGSLTLHVSVTLMETVIGFLAGTLLGTLIAVVLWWSPLLSKVLDP 109

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V      PG      + A+ +I  +     T  +Y +   + 
Sbjct: 110 YLVILNAMPKVALGPILIVALG---PGYFSIIAMGALISIIIT-----TIVVYTAFKGVD 161

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  + WQ F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 162 PNYSKVLQTFGATRWQIFREVILPASFPTIISTLKVNVGLSWVGVIVGEFLVASK----- 216

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++L +     +  Q++
Sbjct: 217 -GLGYLIIYGFQVFNFNLVLMSLLIIAFFATIMYQVV 252



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 78/193 (40%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   V+  +  +++   + + + + P +S  + P+  +L A P     P+
Sbjct: 66  GSLTLHVSVTLMETVIGFLAGTLLGTLIAVVLWWSPLLSKVLDPYLVILNAMPKVALGPI 125

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +   + +    +  +    +       V         ++ +V  +F  T W+ +R 
Sbjct: 126 LIVALGPGYFS----IIAMGALISIIITTIVVYTAFKGVDPNYSKVLQTFGATRWQIFRE 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP  FP  ++      G +W   IV E        + + GLG  I    +  +F  V+
Sbjct: 182 VILPASFPTIISTLKVNVGLSWVGVIVGEFL------VASKGLGYLIIYGFQVFNFNLVL 235

Query: 557 LGVLIMCCFVLAL 569
           + +LI+  F   +
Sbjct: 236 MSLLIIAFFATIM 248


>gi|254303281|ref|ZP_04970639.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148323473|gb|EDK88723.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding
           cassette transporter membrane protein [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 260

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 15/237 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I   L  +L   I++ +   I   +V +    I  I LD  +L +    T +R+      
Sbjct: 10  ILSFLLIILFWFILSKIYPPIVVPSVSQVWESIKGILLD-TTLLKEILTTIIRLFIGFSF 68

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            L+F+ +++ +  +S+ LG +  PI++ +Q +P + +L   +++               A
Sbjct: 69  GLIFSIIFSLIITRSKLLGDIFYPIIEFLQVVPPISWLILAILWLGLNG--------KPA 120

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +  S    MT S+  S+ NI + L EV+  F L+ ++K+ Y+ VP   P     +++
Sbjct: 121 ILIVSISIFCIMTISLVNSINNIDKKLLEVADVFHLTKFKKWKYIIVPSLYPAFETALIV 180

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +  G   VV +E++ +        GIG  I  A    +   ++   + ++G+ F+ 
Sbjct: 181 CLGTGVKLVVMAEVLTIDS------GIGGQITNARINIETEMVIAWSVIIVGIYFIL 231



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ +FWF +       +         +         ++     T+ R+ +      I  I
Sbjct: 15  LIILFWFILSKIYPPIVVPSVSQVWESIKGILLDTTLLKEILTTIIRLFIGFSFGLIFSI 74

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + I     +     P  + L   P   +  L +  +        L +S+ +      
Sbjct: 75  IFSLIITRSKLLGDIFYPIIEFLQVVPPISWLILAILWLGLNGKPAILIVSISIFCI--- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +++   +       EVA  FH+T ++ W+YII+P ++P + T  I   G      +
Sbjct: 132 -MTISLVNSINNIDKKLLEVADVFHLTKFKKWKYIIVPSLYPAFETALIVCLGTGVKLVV 190

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++EV +        +G+G  I  +        V+   +I+      L
Sbjct: 191 MAEVLTID------SGIGGQITNARINIETEMVIAWSVIIVGIYFIL 231


>gi|322391253|ref|ZP_08064724.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
 gi|321145857|gb|EFX41247.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
          Length = 245

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +  +    + +  +P  +  +     D   L  ++  T    L
Sbjct: 2   RRHISLLGFLGVLSIWQLAGLFQL-LPKFILPTPLEILQSFVRDREFLWYHSWATLRVAL 60

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 61  LGLILGVVIACIMAILMDSLSWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 114

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P   
Sbjct: 115 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFY 172

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 173 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSLISL 226

Query: 254 L 254
           L
Sbjct: 227 L 227



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +I+  +I   + I +     ++  I P   ++   P     P++V  + Y 
Sbjct: 54  ATLRVALLGLILGVVIACIMAILMDSLSWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 114 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 169

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +   ++++  
Sbjct: 170 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSL 223

Query: 565 FVLALNRFL 573
             L   + +
Sbjct: 224 ISLLGMKLV 232


>gi|271969016|ref|YP_003343212.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270512191|gb|ACZ90469.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component-like protein [Streptosporangium roseum DSM
           43021]
          Length = 330

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 93/255 (36%), Gaps = 21/255 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHSLPQY 64
           SRR  P +   +   + + ++    +G             P  ++  +   +    L  Y
Sbjct: 73  SRRRRPAVSTAVRVTVPLLLVAAWWYGTGSGAISPDVLAGPGAVLGALGELVATGQLGDY 132

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R    ++       +   +A  S     ++ P + + +++P L  +   + +F 
Sbjct: 133 LLASARRAGLGVLAGGGIGLLLGVVAGLSALGEELIDPTMQMKRAVPFLALVPLFISWFG 192

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +  I  + V  M    Y  +  + R   E +R F L+G +    + 
Sbjct: 193 VE--------ETFKVVLIAVAAVGPMYAYSYLGVRGVDRKTVEAARGFGLTGARLALGVI 244

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + + +S     ++A+E I   +      GIG  + LA +      ++  
Sbjct: 245 IPTALPNILMALRICLSVSLTGLIAAEQIGATE------GIGYLVTLAQQYYRSDYMVLC 298

Query: 245 MLTMLGVIFLYDQLL 259
           +L    +  L D  +
Sbjct: 299 ILIYAVLGLLIDLAI 313



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 77/258 (29%), Gaps = 24/258 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI--------GIAWQSIGYIVNHFT 372
             +        +       V  +L   W+      AI        G    ++G +V    
Sbjct: 69  RYLGSRRRRPAVSTAVRVTVPLLLVAAWWYGTGSGAISPDVLAGPGAVLGALGELVATGQ 128

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             D L        +  R  + ++    I + +G+  G        I P  Q+  A P   
Sbjct: 129 LGDYL------LASARRAGLGVLAGGGIGLLLGVVAGLSALGEELIDPTMQMKRAVPFLA 182

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL +S           +  +L+       +      G         E A  F +TG R
Sbjct: 183 LVPLFISWFGVEET----FKVVLIAVAAVGPMYAYSYLGVRGVDRKTVEAARGFGLTGAR 238

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               +I+P   P  +         +    I +E          T G+G  +  + +    
Sbjct: 239 LALGVIIPTALPNILMALRICLSVSLTGLIAAEQIG------ATEGIGYLVTLAQQYYRS 292

Query: 553 PEVVLGVLIMCCFVLALN 570
             +VL +LI     L ++
Sbjct: 293 DYMVLCILIYAVLGLLID 310


>gi|146277962|ref|YP_001168121.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145556203|gb|ABP70816.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 266

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 7/195 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++      +  A ++ IP+G  +G        +  F   LAA P   F PL++  +    
Sbjct: 73  SLITYGTGLGAAILVGIPLGALMGMVRLFGRTVDVFVFALAATPRVAFIPLIILLLGLGI 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  ++++  G    I+ N  AG  A   +  E+A S   +  R   +++LPG  P+
Sbjct: 133 ----EAKAMIVFLGAVMPIILNTYAGVQARDEELIEMARSTGASATRIQIHVVLPGALPF 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G           ++V+E+ +            A    +     +  +VL +  +   
Sbjct: 189 LVVGLRLGATIGLINTVVAELYTAVSGLGGLL---ALYGNTFRMAEYFVIVLALAAIGVI 245

Query: 566 VLALNRFLWHPLYLY 580
           V    R L   L  +
Sbjct: 246 VTESLRLLEGRLSRW 260



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 78/224 (34%), Gaps = 11/224 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P   V+     L    L     ++ +   + +  ++L       L    R  G  +  
Sbjct: 48  PSPAATVEAAGRLLSEGRLQGALGQSLITYGTGLGAAILVGIPLGALMGMVRLFGRTVDV 107

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + + P + F+   ++         +     A    +F   V  +  + Y  +    
Sbjct: 108 FVFALAATPRVAFIPLIIL--------LLGLGIEAKAMIVFLGAVMPIILNTYAGVQARD 159

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +L E++RS   S  +   ++ +P ++P LV  + +  + G    V +E+      +  L
Sbjct: 160 EELIEMARSTGASATRIQIHVVLPGALPFLVVGLRLGATIGLINTVVAELYTAVSGLGGL 219

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
               +      +  +   I+ A+  +  ++    +LL   +  W
Sbjct: 220 L---ALYGNTFRMAEYFVIVLALAAIGVIVTESLRLLEGRLSRW 260


>gi|90414042|ref|ZP_01222026.1| putative ABC transporter permease protein [Photobacterium profundum
           3TCK]
 gi|90324964|gb|EAS41485.1| putative ABC transporter permease protein [Photobacterium profundum
           3TCK]
          Length = 273

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +A  T   ++  +++ L     +A        L   L+PIL   Q+IP+       +
Sbjct: 75  LLSHAWVTASEVILGLLLGLSMGLFFALQMLLFNPLRRWLLPILIASQAIPVFAIAPILM 134

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   F + T          Y  L + P    +++++   S WQ  
Sbjct: 135 LWLGYGIASKIVMAALIIFFPVTTCC--------YDGLRHTPTGYLDLAKTMGASKWQLL 186

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P ++P L   + +++      VVA    VVG+ V    G+G  +  A     +  
Sbjct: 187 RHVRLPAALPALASGIRVAV------VVAPIGAVVGEWVGSSEGLGYLMLQANARMMIDE 240

Query: 241 ILYAMLTML---GVIFLYDQLLFRPMIVWSNK 269
           +  A+L +      ++    LL +  I W +K
Sbjct: 241 MFAALLILATFSITLYFAADLLLKRAIPWQSK 272



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 110 LRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFF----PVTTCCYDGLR 165

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  R++ LP   P   +G   A   A   ++V E        
Sbjct: 166 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAVVVAPIGAVVGEWVG----- 220

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   +LI+  F + L
Sbjct: 221 -SSEGLGYLMLQANARMMIDEMFAALLILATFSITL 255


>gi|260588535|ref|ZP_05854448.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Blautia hansenii DSM 20583]
 gi|260541010|gb|EEX21579.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Blautia hansenii DSM 20583]
          Length = 271

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 84/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I+D +   +   SL ++ S T    L +  +  L   + A +     R+  +L P
Sbjct: 57  SSPSQILDTMFKMISDGSLTKHISVTLTETLISFALVTLLGILCAVILWIFPRVSSILEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  +     +I     AIF            ++Y   C I 
Sbjct: 117 YLVVLNSLPKSALAPLLIVWLGSNMKTIIIAGISVAIFGA--------VLNLYTGFCEID 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  ++ ++   +       + +P S+P ++  M +++      +V  EMI         
Sbjct: 169 SDKLKLIQTLGGNKKDALIKVILPASIPLILSVMKVNIGLSLIGIVIGEMIG------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  + +   L  ++ A++ +  +  L    +
Sbjct: 223 QGLGYLIIYSSQVFQLTTMIMAIVILCVIAILLYGFI 259



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++   + +++ I   + +   P +SS ++P+  +L + P +   PL++  +   
Sbjct: 81  VTLTETLISFALVTLLGILCAVILWIFPRVSSILEPYLVVLNSLPKSALAPLLIVWLGSN 140

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                +    + IFG     + N+  G     +D  ++  +           +ILP   P
Sbjct: 141 MKTIIIAGISVAIFGA----VLNLYTGFCEIDSDKLKLIQTLGGNKKDALIKVILPASIP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G +    ++ E+           GLG  I  S++      +++ ++I+C 
Sbjct: 197 LILSVMKVNIGLSLIGIVIGEMIG------SKQGLGYLIIYSSQVFQLTTMIMAIVILCV 250

Query: 565 FVLALNRFL 573
             + L  F+
Sbjct: 251 IAILLYGFI 259


>gi|223984599|ref|ZP_03634726.1| hypothetical protein HOLDEFILI_02022 [Holdemania filiformis DSM
           12042]
 gi|223963446|gb|EEF67831.1| hypothetical protein HOLDEFILI_02022 [Holdemania filiformis DSM
           12042]
          Length = 251

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 97/239 (40%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +++  ++ + ++      +P D+   +   +   +       T  RML    ISL+
Sbjct: 16  IVILMILWQLLALSVNNDILIPMPLDVARRMLADVSQPAFYAQTLSTLGRMLKGFGISLI 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V    AA    +  ++ P+  I+++IP L ++   +++  +   G V+      +F 
Sbjct: 76  LALVCGFAAAMQPVIRRLIEPLEVIVKTIPNLSYIMIFLIWLGSE--GSVMVTSFCVLFP 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F + V         S   +  +L++V R +       FW + +P ++P L+  M     
Sbjct: 134 VFYTAV-------LLSQDLLDSELQDVLRCYPERSVSVFWKVRLPQALPHLLAAMKTGFG 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK-EQDLLAILYAMLTMLGVIFLYDQLL 259
            G    V +E++          GIG  ++ A +   D+  +    L ++ +    D L 
Sbjct: 187 LGLRVCVMAEVLT-----QVRIGIGRQMSYAARIALDMTGLFAWTLWIILISAAADGLF 240



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 64/194 (32%), Gaps = 13/194 (6%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T+ R++    I+ I+ +  G     +P I   I+P   ++   P   +  + +  +
Sbjct: 58  QTLSTLGRMLKGFGISLILALVCGFAAAMQPVIRRLIEPLEVIVKTIPNLSYIMIFLIWL 117

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA-FPNDFKEVASSFHITGWRWWRYIILP 500
                  +    ++  F   + + +  +  +     ++ ++V   +       +  + LP
Sbjct: 118 G------SEGSVMVTSFCVLFPVFYTAVLLSQDLLDSELQDVLRCYPERSVSVFWKVRLP 171

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE-KGSFPEVVLGV 559
              P+ +    T  G      +++EV           G+G  ++ +         +    
Sbjct: 172 QALPHLLAAMKTGFGLGLRVCVMAEVL-----TQVRIGIGRQMSYAARIALDMTGLFAWT 226

Query: 560 LIMCCFVLALNRFL 573
           L +     A +   
Sbjct: 227 LWIILISAAADGLF 240


>gi|311069553|ref|YP_003974476.1| putative permease [Bacillus atrophaeus 1942]
 gi|310870070|gb|ADP33545.1| putative permease of ABC transporter [Bacillus atrophaeus 1942]
          Length = 273

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 72/186 (38%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+F  V+  ++ + +   +   + +   ++  + P+  +L A P     P+++  +  
Sbjct: 79  GVTLFETVLGFLLGTFLGTCLAALLWWSNKLAQILDPYLVVLNAMPKVALGPILIVALGP 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++     +++ +  T       V         ++ +V ++F       ++ +ILP   
Sbjct: 139 SFISIIAMGAVISVIITA----IVVYTAFQEVDENYLKVMNTFGAKKRVIFKEVILPASS 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++      G +W   IV E        +   GLG  I    +  +F  V L + I+ 
Sbjct: 195 PAIISTLKVNVGLSWVGVIVGEFL------VSAKGLGYMIIYGFQVFNFTLVFLSLFIIA 248

Query: 564 CFVLAL 569
            F   +
Sbjct: 249 IFATLM 254



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   SL ++   T    +   ++        A L   S +L  +L P
Sbjct: 56  SSPSAVWSLFIEKITDGSLGEHIGVTLFETVLGFLLGTFLGTCLAALLWWSNKLAQILDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVVLNAMPKVALGPILIVALGPSFISIIAMGAVISVII--------TAIVVYTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F       F  + +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ENYLKVMNTFGAKKRVIFKEVILPASSPAIISTLKVNVGLSWVGVIVGEFLV------SA 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++  +     L  Q
Sbjct: 222 KGLGYMIIYGFQVFNFTLVFLSLFIIAIFATLMYQ 256


>gi|298292355|ref|YP_003694294.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296928866|gb|ADH89675.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 269

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT+   ++   I ++  + VG W   +  +++   P+ ++  A P  V  P+    +  
Sbjct: 71  GITLLETLLAFAIGALGGVLVGFWFARKQLVAAVFDPYVKMANALPRVVLAPIFALWLGL 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+ F     + FNV  G           A    +   +  R +  P   
Sbjct: 131 GIWSKVALGVTLVFFI----VFFNVYQGVREVSPTVLANARMLGMNERQLMRNVYWPSAL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +  +   TA G A   ++V E            GLG  I ++        V  G+L++ 
Sbjct: 187 TWMFSSLHTAVGFALVGAVVGEYLG------SAAGLGYRIHQAEGVFDVTGVFSGMLVLA 240

Query: 564 CFVLALNRFL 573
            FV+ ++  +
Sbjct: 241 IFVIIIDTLV 250



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P D+            +  +   T L  L A  I  L   +     A+ + +  V  P
Sbjct: 48  STPIDVFQRTWRDFYTGVIWYHLGITLLETLLAFAIGALGGVLVGFWFARKQLVAAVFDP 107

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +  ++P +       ++       KV        F +F        F++YQ +  + 
Sbjct: 108 YVKMANALPRVVLAPIFALWLGLGIWSKVALGVTLVFFIVF--------FNVYQGVREVS 159

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R   ++  Q    +  P ++  +  ++  ++    F +V +   VVG+ +   
Sbjct: 160 PTVLANARMLGMNERQLMRNVYWPSALTWMFSSLHTAVG---FALVGA---VVGEYLGSA 213

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  A    D+  +   ML +   + + D L+
Sbjct: 214 AGLGYRIHQAEGVFDVTGVFSGMLVLAIFVIIIDTLV 250


>gi|291561135|emb|CBL39934.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 260

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 87/237 (36%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L    + +          P  +   +       ++  +   TT  ++   VI    
Sbjct: 23  VFIALWWIYVAVKHVPAYILPSPPKVWSSLVKMFVKGTVYAHLWTTTYEVILGFVIGAFL 82

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V   +  K   L  +L+P L  +Q+ P +  +   VV+F            ++ +  I
Sbjct: 83  GIVLGYVFIKIDALKTMLMPYLIFLQTAPKIALVPLFVVWFGIGL--------VSKVVLI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            +  ++ +   M   L +IP D+  + +  + S WQ F  + + +S+P L  ++ + +  
Sbjct: 135 ISMVLFPVLSGMMLGLESIPPDVRNLMKILKASKWQVFSQVEMQYSLPALFASLKVGIVQ 194

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                + +E +          G+G  +  A    D   +L  ++  + +     Q++
Sbjct: 195 AVIGAIVAEWMSGKQ------GLGYILTYASSTYDTPMLLAGIIVTIILGIATYQVI 245



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 13/229 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++          V    +    +    +V  F    V   +W    T + V++  +I + 
Sbjct: 25  IALWWIYVAVKHVPAYILPSPPKVWSSLVKMFVKGTVYAHLW---TTTYEVILGFVIGAF 81

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I +G        + + + P+   L   P     PL V       ++      +L+I  
Sbjct: 82  LGIVLGYVFIKIDALKTMLMPYLIFLQTAPKIALVPLFVVWFGIGLVSK----VVLIISM 137

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +L  ++ G  + P D + +      + W+ +  + +    P            A  
Sbjct: 138 VLFPVLSGMMLGLESIPPDVRNLMKILKASKWQVFSQVEMQYSLPALFASLKVGIVQAVI 197

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            +IV+E  S         GLG  +  ++     P ++ G+++     +A
Sbjct: 198 GAIVAEWMSGKQ------GLGYILTYASSTYDTPMLLAGIIVTIILGIA 240


>gi|294792583|ref|ZP_06757730.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Veillonella sp.
           6_1_27]
 gi|294456482|gb|EFG24845.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Veillonella sp.
           6_1_27]
          Length = 513

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A VI+++   +      + +RL   ++  ++ + +IP +  L   +            
Sbjct: 30  VLASVIAIIIGGLLGVFIYEYKRLATPVMVGVNFLYTIPSISMLGLLLYVSGVGNT---- 85

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI A+    +  M  + +  L  I + + E   +  L+  Q+ W + +P +MP +
Sbjct: 86  ----TAIIALVIYALLPMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTI 141

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          +V +  +    + I   G+G  I   I        +   L +  + 
Sbjct: 142 MAGIRT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLA 194

Query: 253 FLYDQLL 259
              D L 
Sbjct: 195 ITVDALF 201



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  +IA II   +G++I     +++ +      L   P+     L++      +    +
Sbjct: 30  VLASVIAIIIGGLLGVFIYEYKRLATPVMVGVNFLYTIPSISMLGLLLYVSGVGNTTAII 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       E   +  +T  +    I +P   P  + G 
Sbjct: 90  ALVIYALL----PMVRNTFTGLNQIDQAMCEAGIALGLTRIQRLWNIEIPLAMPTIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T         +++   +     +   GLG  I            + G L++    + ++
Sbjct: 146 RT-------MLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAITVD 198

Query: 571 RFL 573
              
Sbjct: 199 ALF 201


>gi|77457569|ref|YP_347074.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77381572|gb|ABA73085.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf0-1]
          Length = 271

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q  + +  R+   + I+ L        A      G  L P+L ++  +P L  L    
Sbjct: 71  LWQDTASSLQRLAIGLGIAALAGLCLGMAAGTLPLFGAPLSPLLTVLSMVPPLAILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q   +IP +L   +++   S W   
Sbjct: 131 IVFGLG--------ELSKVMLIVIGITPALARDLEQRARDIPVELLIKAQTLGASTWTLM 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ + +   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRVVLPQLLPRLLISLRLMLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +L D  L
Sbjct: 237 ILPYVVWITLLAWLMDWGL 255



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + IA++  + +G+  G  P   + + P   +L+  P     P++      
Sbjct: 76  ASSLQRLAIGLGIAALAGLCLGMAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPALARDLEQRARDIPVELLIKAQTLGASTWTLMLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLLISLRLMLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|152974206|ref|YP_001373723.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152022958|gb|ABS20728.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 256

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 11/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     T+  V+  +  A ++   + I +   P     + P   +    P  V  PL +
Sbjct: 54  LLPNITKTLQEVISGLFFAILLGTSIAIMMDVIPIFRLLMNPLLVISQTIPIVVLAPLFI 113

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               Y      L   +++I    + I  +++ G         ++  +   + W+ ++ + 
Sbjct: 114 IWFGYG----MLPKVMVVILVCFFPIALSILEGFQTVDKSMLKLLQTMRASKWQMYQKVK 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P + PY+ +G   A   +   +I+ E          + GLG  +  +T+      V  G
Sbjct: 170 FPAVLPYFFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-G 222

Query: 559 VLIMCCFVLALNRFL 573
           +  M   V     F+
Sbjct: 223 IAAMIVIVTLFLYFI 237



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 95/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    I  +      L    ++T   ++S +  ++L
Sbjct: 15  WLILLIAIWEGSVSLFHIEPWILPKPSTIIQELIGMKELLLPNITKTLQEVISGLFFAIL 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F            L  +  
Sbjct: 75  LGTSIAIMMDVIPIFRLLMNPLLVISQTIPIVVLAPLFIIWFGYGM--------LPKVMV 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  S+ +    + + + ++ ++ R S WQ +  +  P  +P     + ++++
Sbjct: 127 VILVCFFPIALSILEGFQTVDKSMLKLLQTMRASKWQMYQKVKFPAVLPYFFSGLKIAVT 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  M+ ++ L+   +
Sbjct: 187 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGIAAMIVIVTLFLYFI 237


>gi|302335464|ref|YP_003800671.1| binding-protein-dependent transport systems inner membrane
           component [Olsenella uli DSM 7084]
 gi|301319304|gb|ADK67791.1| binding-protein-dependent transport systems inner membrane
           component [Olsenella uli DSM 7084]
          Length = 253

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 89/233 (38%), Gaps = 15/233 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR F  +   LA ++   +  +L   +    +P     +V +  D   L  +++ T L 
Sbjct: 4   ARRTFIPLTATLALLVAWQLAVMLGL-VPNFLLPSPTQVVVALIEDASLLVSHSAATLLE 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               ++I     FV A L  +   +G+ L P++ + Q+IP +      V++F      K 
Sbjct: 63  AFLGLLIGCAVGFVVAVLMDRFEAVGLALDPLVTLSQTIPTVAIAPLLVLWFGYGLAPK- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +  +  S  + +T S+     +   D+ ++ R+     WQ FW + +P +   
Sbjct: 122 -------VVLVIISTFFPITVSLVSGFRSADADMIDLMRTMNAGDWQIFWQVKIPAAAEQ 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
               + +S +      V +E +          G+G Y+    K      +   
Sbjct: 175 FFGGLRISATYAIVGAVIAEWLGG------FSGLGVYMTRVRKSFSYDRMFAV 221



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 10/215 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W   V    +          V     +D   ++     T+    + ++I   +  
Sbjct: 16  ALLVAWQLAVMLGLVPNFLLPSPTQVVVALIEDASLLVSHSAATLLEAFLGLLIGCAVGF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            V + +     +   + P   L    P     PL+V    Y          +L+I  T +
Sbjct: 76  VVAVLMDRFEAVGLALDPLVTLSQTIPTVAIAPLLVLWFGYGLA----PKVVLVIISTFF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I  ++++G  +   D  ++  + +   W+ +  + +P     +  G   +   A   ++
Sbjct: 132 PITVSLVSGFRSADADMIDLMRTMNAGDWQIFWQVKIPAAAEQFFGGLRISATYAIVGAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++E           +GLG Y+    +  S+  +  
Sbjct: 192 IAEWLGG------FSGLGVYMTRVRKSFSYDRMFA 220


>gi|218676848|ref|YP_002395667.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
 gi|218325116|emb|CAV26975.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 283

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            R++ P +  L++  +++G+  + +++  +    +P      + +      L ++   T 
Sbjct: 35  PRQMNPVMRLLISSAVILGLWQLVVVIFEMPSFILPAPAEVFLKLIERYDVLLKHTWVTA 94

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +L  +++ L     +A        L   L+PIL   Q+IP+       +++       
Sbjct: 95  QEILLGLLLGLSMGLFFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIAS 154

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV+ A +   F + T          Y  L N P    +++++   S WQ   Y+ +P ++
Sbjct: 155 KVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRYIQLPAAL 206

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L   + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  + 
Sbjct: 207 PTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILA 260

Query: 250 GV 251
            +
Sbjct: 261 VL 262



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 121 LKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCYDGLR 176

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  RYI LP   P   +G   A   A   ++V E        
Sbjct: 177 NTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG----- 231

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 232 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSISL 266


>gi|116248976|ref|YP_764817.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253626|emb|CAK12019.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 281

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 92/238 (38%), Gaps = 6/238 (2%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L++     V  +L + W+  V    +          V +    D   +     +T     
Sbjct: 26  LRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVTTKITF 85

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A +  +   I++     +     P A +L   P     PL++     Y  +  + 
Sbjct: 86  MSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQVTPIVAISPLILI----YAPSTQVA 141

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L +       + IL N++ G  +  ++   +   +  + W+   ++ +P   PY++TG  
Sbjct: 142 LLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLIHLKIPAAQPYFMTGLR 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              G A  A++V+E A+          L   + E+  + + P +   +L++    +A+
Sbjct: 202 IGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRMNIPRLFAALLMLSMLGVAI 257



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 90/248 (36%), Gaps = 12/248 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F ++A ++++    + L G+    +P           D  +L      TT     ++++
Sbjct: 31  PFLVIALLILVWYAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVTTKITFMSLML 90

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+    +A    +SR + +   P+  I+Q  PI+      ++Y            ++A 
Sbjct: 91  ALVGGVGFAIFLVQSRWVELAFYPLAVILQVTPIVAISPLILIY--------APSTQVAL 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F    + +  +M Q L ++  +L  +   +  S WQ   +L +P + P  +  + +
Sbjct: 143 LICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLIHLKIPAAQPYFMTGLRI 202

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    V +E             +   +  A    ++  +  A+L +  +       
Sbjct: 203 GGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRMNIPRLFAALLMLSMLGVAI--F 258

Query: 259 LFRPMIVW 266
               +I W
Sbjct: 259 GLTTLIAW 266


>gi|26986916|ref|NP_742341.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24981525|gb|AAN65805.1|AE016209_4 ABC transporter, permease protein [Pseudomonas putida KT2440]
          Length = 287

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP     + + +L   V+ ++  F   +LA  ++    +L  +  +   +P +  L  
Sbjct: 81  GELPAKVGVSLVILLKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           + + IF +  S +W +  + Y     +   L    R++ L G +
Sbjct: 141 ALLWFGLG--------DNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLR 192

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              ++ VP ++P ++  + +  +  W  ++A+E++    +     G+G YI     E   
Sbjct: 193 LVLHILVPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYT 250

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  L + L+F  +   + +
Sbjct: 251 DKVFAGLAVVILIGLLVEGLVFNTLERLTVR 281



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  +++    W +  N  AG        +    ++ + G R   +I++P   P  ++G  
Sbjct: 152 LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLHILVPAALPSILSGLK 211

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AW   I +E+           GLG YI ++  +    +V  G+ ++    L +  
Sbjct: 212 IGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEG 269

Query: 572 FLWHPLYLYGTRC 584
            +++ L     R 
Sbjct: 270 LVFNTLERLTVRR 282


>gi|320534803|ref|ZP_08035222.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320132982|gb|EFW25511.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 260

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 87/242 (35%), Gaps = 12/242 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R      +           +  + W+                         D   + W  
Sbjct: 5   RSSAFRRWRARLLWWAGIGLAILIWYWAALDQPEYALPGPGTTWHAFLGLIDDGGLGWTL 64

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R V+ + ++ +I IP G  +G    +   +  + Q+L A P     P+V+  V  
Sbjct: 65  WLTLSRAVIGLGLSCLIGIPTGWVLGTWTWLRELLDSWVQVLMAVP-----PIVLVVVGM 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             L P   + +L++      +L  ++         D  E+A+ F  +     R +ILP +
Sbjct: 120 IWLGPTAGVVILVVTLVTLPLLVASMRDAVLNVDGDLLEMATVFSKSRPWTIRRLILPAV 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++    A G +   ++++E+ S        TGLGA + ++       +V     +M
Sbjct: 180 APPVLSALTVAVGQSVRVTVMAELLS------TPTGLGAEVQQARTNLETADVFALSAMM 233

Query: 563 CC 564
             
Sbjct: 234 AA 235



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 14/245 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
               F   R     +  +   ++I     L         P          +D   L    
Sbjct: 5   RSSAFRRWRARLLWWAGIGLAILIWYWAALDQPEYALPGPGTTWHAFLGLIDDGGLGWTL 64

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R +  + +S L       +      L  +L   + ++ ++P +  +   +++   
Sbjct: 65  WLTLSRAVIGLGLSCLIGIPTGWVLGTWTWLRELLDSWVQVLMAVPPIVLVVVGMIWLGP 124

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                ++   L  +          +  SM  ++ N+  DL E++  F  S       L +
Sbjct: 125 TAGVVILVVTLVTLPL--------LVASMRDAVLNVDGDLLEMATVFSKSRPWTIRRLIL 176

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P ++  + +++       V +E++          G+G+ +  A    +   +    
Sbjct: 177 PAVAPPVLSALTVAVGQSVRVTVMAELLS------TPTGLGAEVQQARTNLETADVFALS 230

Query: 246 LTMLG 250
             M  
Sbjct: 231 AMMAA 235


>gi|302548097|ref|ZP_07300439.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces hygroscopicus ATCC
           53653]
 gi|302465715|gb|EFL28808.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Streptomyces himastatinicus ATCC
           53653]
          Length = 288

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 10/166 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  +       + + +  G        I    Q+    P     PL++            
Sbjct: 100 VSGLAYGVAAGLVLALIAGLSRLGEGVIDGPVQIKRGIPTLALIPLLILWFGIG----ES 155

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       +  +   G       + E+A +  ++  R+  +I+LPG  P ++ G 
Sbjct: 156 MKVITIALSAFVPVYIHTHNGLRTIDARYVELAETLGLSRPRFLLHIVLPGALPGFLLGM 215

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             A   AW A  V E  +       T+G+G     +   G    ++
Sbjct: 216 RFAVTAAWLALAVVEQVN------ATSGIGYMTGLARTYGQTDIII 255



 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 14/221 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   +  G     L   +  + P  +V      +    L      +    +S +   + 
Sbjct: 49  VLLLAIWSGGSATGLIDARNLSAPWTVVATAGDLIADGRLQTNVWTSAELAVSGLAYGVA 108

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A +A  SR    V+   + I + IP L  +   +++F      KVI   L+A   
Sbjct: 109 AGLVLALIAGLSRLGEGVIDGPVQIKRGIPTLALIPLLILWFGIGESMKVITIALSAFVP 168

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++           +  L  I     E++ +  LS  +   ++ +P ++PG +  M  +++
Sbjct: 169 VY--------IHTHNGLRTIDARYVELAETLGLSRPRFLLHIVLPGALPGFLLGMRFAVT 220

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             W  +   E +          GIG    LA        I+
Sbjct: 221 AAWLALAVVEQV------NATSGIGYMTGLARTYGQTDIII 255


>gi|255013295|ref|ZP_05285421.1| putative ABC transporter [Bacteroides sp. 2_1_7]
          Length = 452

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 82/236 (34%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+ R V+ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRGVLGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFLYSGLASAAG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    + PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFISFFFDK 234



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T LR 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  VLGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASAAGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|254489258|ref|ZP_05102462.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214042266|gb|EEB82905.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 236

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 95/232 (40%), Gaps = 14/232 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           AF L++    + + G+    +P  +        +   + + A  T   ++  ++I  +  
Sbjct: 5   AFALLLWQGVVWITGVPAFILPSPLRVAQAAIANRALIAENALVTATEVILGLMIGTVLG 64

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A S RL  V++P+L   Q++P+        ++       KV+ A L   F   
Sbjct: 65  AITAVPLAGSARLHRVVMPLLIFTQAVPVFALAPILTLWLGYGVASKVVMAVLIIYF--- 121

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T + Y  L  +P D+ +++R+   +  Q    + +P ++P L   + ++    
Sbjct: 122 -----PVTSAFYDGLTRVPADILDMARTMGGTKGQIMRRIKIPHALPSLGTGLRLA---- 172

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              V A    V+G+ V    G+G  + LA        +  ++L ++ +  L 
Sbjct: 173 --AVYAPIGAVIGEWVGASKGLGYLMLLANGRAKTDLMFASLLALVVMTLLL 222



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 10/224 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W  VV    +          V      +   +     +T   V++ ++I +++     
Sbjct: 9   LLWQGVVWITGVPAFILPSPLRVAQAAIANRALIAENALVTATEVILGLMIGTVLGAITA 68

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +     +   + P      A P     P++   + Y   +  +   L++ F     + 
Sbjct: 69  VPLAGSARLHRVVMPLLIFTQAVPVFALAPILTLWLGYGVASKVVMAVLIIYF----PVT 124

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G +  P D  ++A +   T  +  R I +P   P   TG   A   A   +++ E
Sbjct: 125 SAFYDGLTRVPADILDMARTMGGTKGQIMRRIKIPHALPSLGTGLRLAAVYAPIGAVIGE 184

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                     + GLG  +  +  +     +   +L +    L L
Sbjct: 185 WVG------ASKGLGYLMLLANGRAKTDLMFASLLALVVMTLLL 222


>gi|116332962|ref|YP_794489.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus brevis ATCC 367]
 gi|116098309|gb|ABJ63458.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus brevis ATCC 367]
          Length = 220

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 78/194 (40%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T L  +  +++  +         ++ RRL  V++ I +++Q+IP L  L+  ++     
Sbjct: 27  QTFLVSIYGVLLGAIVGIPLGIWISQYRRLSPVIIGIANVIQTIPSLAMLSILMLGLGLG 86

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   +   I  +F   +  +  + Y  + ++ RD+ +  +   ++G+Q    + +P
Sbjct: 87  --------QTTVIVTVFLYSLLPIIKNTYTGMLSVDRDVLDAGKGMGMTGFQIMKTIRLP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+  ++  +          +V    I V  + I   G+G  I       D  AI+ A  
Sbjct: 139 LSLSVIIAGIR-------NALVIGIGITVIGSFIGSGGLGDIIVRGTNATDGGAIILAGA 191

Query: 247 TMLGVIFLYDQLLF 260
               ++ +   L+ 
Sbjct: 192 LPTALMAIITDLVL 205



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 15/211 (7%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +   + +YV+     T    +  +++ +I+ IP+GIWI     +S  I   A ++   P+
Sbjct: 13  YFSHNGMYVLSQFNQTFLVSIYGVLLGAIVGIPLGIWISQYRRLSPVIIGIANVIQTIPS 72

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                +++  +          + + +   +   I+ N   G  +   D  +      +TG
Sbjct: 73  LAMLSILMLGLGLGQTT----VIVTVFLYSLLPIIKNTYTGMLSVDRDVLDAGKGMGMTG 128

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++  + I LP      + G   A       +++      G       GLG  I   T   
Sbjct: 129 FQIMKTIRLPLSLSVIIAGIRNALVIGIGITVIGSFIGSG-------GLGDIIVRGTNAT 181

Query: 551 SFPEVVLG----VLIMCCFVLALNRFLWHPL 577
               ++L       +M      +  F+   L
Sbjct: 182 DGGAIILAGALPTALMAIITDLVLSFIEKRL 212


>gi|256394738|ref|YP_003116302.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256360964|gb|ACU74461.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 302

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 85/263 (32%), Gaps = 14/263 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + +  R   V      +      +   V  +    WF     V      Q  G     +
Sbjct: 26  RLDERTRRATVAFRRRKQQIWGARALLAVVVIGGWQWFTAAGWVDKFFYAQPSGIWNRLW 85

Query: 372 TY----QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            Y     +          TM   +   +I + + + +G+ +G    ++  + P+ +++ A
Sbjct: 86  DYFQNGTEFGSYPAQIETTMQEALYGFLIGTGVGVVLGVALGMNRFLAEVLDPYIKIVNA 145

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V   + +           L  ++L+ F     + FN   G      +    A    
Sbjct: 146 VPRIVLGSIFIVAFGVGMAPKVLLAAVLVFFI----VFFNAFQGVREVDRNVLNNAKVLG 201

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W   R++I+P    + +    +A G A   ++V EV           GLG  I  + 
Sbjct: 202 ASRWHTIRHVIIPSALTWIIASLHSAFGFAIVGAVVGEVLGAQK------GLGLLIKSAQ 255

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
                  V   + ++   VL + 
Sbjct: 256 GNFDPYGVFANMFVIAALVLIVE 278



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 98/284 (34%), Gaps = 27/284 (9%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI---------- 54
                   RR    I+   A + V+ I                      I          
Sbjct: 31  TRRATVAFRRRKQQIWGARALLAVVVIGGWQWFTAAGWVDKFFYAQPSGIWNRLWDYFQN 90

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             +  S P     T    L   +I      V       +R L  VL P + I+ ++P + 
Sbjct: 91  GTEFGSYPAQIETTMQEALYGFLIGTGVGVVLGVALGMNRFLAEVLDPYIKIVNAVPRIV 150

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  +V F      KV+ A +   F +F        F+ +Q +  + R++   ++    
Sbjct: 151 LGSIFIVAFGVGMAPKVLLAAVLVFFIVF--------FNAFQGVREVDRNVLNNAKVLGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S W    ++ +P ++  ++ ++  +     F +V +   VVG+ +    G+G  I  A  
Sbjct: 203 SRWHTIRHVIIPSALTWIIASLHSAFG---FAIVGA---VVGEVLGAQKGLGLLIKSAQG 256

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRLERT 275
             D   +   M  +  ++ + + ++    R ++ W  K + E  
Sbjct: 257 NFDPYGVFANMFVIAALVLIVEFVIERVERRLLAWRPKVQSETV 300


>gi|190149839|ref|YP_001968364.1| ABC transporter permease [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307245387|ref|ZP_07527475.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249732|ref|ZP_07531711.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307254342|ref|ZP_07536180.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258800|ref|ZP_07540532.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260979|ref|ZP_07542661.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263161|ref|ZP_07544782.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914970|gb|ACE61222.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306853728|gb|EFM85945.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858240|gb|EFM90317.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306862641|gb|EFM94597.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867151|gb|EFM99007.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869281|gb|EFN01076.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871523|gb|EFN03246.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 249

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 82/206 (39%), Gaps = 14/206 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   T + +++ + +  L   + A   + S+ L   L+P+L I Q+IP+       V
Sbjct: 50  LWQHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPVFAIAPLLV 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    L   F +  +         Y  L N P+   E++++  +      
Sbjct: 110 LWLGYGMASKIAMTVLIIYFPVTAAC--------YDGLRNTPKAYLELAKTLEIKPLAML 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L   + +++S      VA    VVG+ V    G+G  +  A        
Sbjct: 162 LLVRLPAALPALASGLRIAVS------VAPIGAVVGEWVGSSQGLGYLMLHANARMQTDL 215

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +  A+  +L +      +  R +  W
Sbjct: 216 LFAALTVLLLMTLCLYFITDRLLRRW 241



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 14/251 (5%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F +L     +S +L + W  VV G A+          V          +   G +T   +
Sbjct: 2   FKRLFKIGGLSLLLILLWQAVVTGFALPHYMLPAPLTVFEQIVNQFPLLWQHGQVTFIEI 61

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + +  ++ +   + +     ++  + P   +  A P     PL+V  + Y   +   
Sbjct: 62  IAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPVFAIAPLLVLWLGYGMASKIA 121

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++ F     +      G    P  + E+A +  I        + LP   P   +G 
Sbjct: 122 MTVLIIYF----PVTAACYDGLRNTPKAYLELAKTLEIKPLAMLLLVRLPAALPALASGL 177

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL- 569
             A   A   ++V E          + GLG  +  +  +     +   + ++    L L 
Sbjct: 178 RIAVSVAPIGAVVGEWVG------SSQGLGYLMLHANARMQTDLLFAALTVLLLMTLCLY 231

Query: 570 ---NRFLWHPL 577
              +R L   L
Sbjct: 232 FITDRLLRRWL 242


>gi|163760225|ref|ZP_02167308.1| ATP-binding protein of ABC transporter [Hoeflea phototrophica
           DFL-43]
 gi|162282624|gb|EDQ32912.1| ATP-binding protein of ABC transporter [Hoeflea phototrophica
           DFL-43]
          Length = 284

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V     +D   +     +T+   V+ + +A I  + + +       +   + PFA +L 
Sbjct: 64  VVLDTLIKDAALLFSSLLVTLRITVLSLALAVIGGVGLAVLFTQSRFVEMSLFPFAIVLQ 123

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P    FPL    ++ Y  +    L L       + IL N   G ++   +  +     
Sbjct: 124 VTPIVAIFPL----INIYVDDQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLIDYFRLN 179

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+   ++ LP   PY++ G   A G A   ++V+E  +      +++GL + I E+
Sbjct: 180 GATRWQTLWHLRLPAAMPYFLGGLKIAGGLALIGAVVAEFVAG--TAGQSSGLASRIIEA 237

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             + + P +   ++++    + +
Sbjct: 238 GYRLNAPRLFAALILISLTGIVI 260



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 84/215 (39%), Gaps = 10/215 (4%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +  +PR  V +  +  D   L      T    + ++ ++++     A L  +SR + M L
Sbjct: 56  QYILPRPGVVLDTLIKDAALLFSSLLVTLRITVLSLALAVIGGVGLAVLFTQSRFVEMSL 115

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P   ++Q  PI+       +Y  +     ++ A + A F I +        +    L +
Sbjct: 116 FPFAIVLQVTPIVAIFPLINIYVDDQTTKLLLCAWIVAFFPILS--------NTTLGLNS 167

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + R+L +  R    + WQ  W+L +P +MP  +  + ++        V +E   V  T  
Sbjct: 168 VDRNLIDYFRLNGATRWQTLWHLRLPAAMPYFLGGLKIAGGLALIGAVVAEF--VAGTAG 225

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              G+ S I  A    +   +  A++ +     + 
Sbjct: 226 QSSGLASRIIEAGYRLNAPRLFAALILISLTGIVI 260


>gi|297584884|ref|YP_003700664.1| binding-protein-dependent transporter inner membrane component
           [Bacillus selenitireducens MLS10]
 gi|297143341|gb|ADI00099.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus selenitireducens MLS10]
          Length = 254

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 85/225 (37%), Gaps = 15/225 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              F+ V      L         P  I+ +    L    +  +   T   +L+ ++IS +
Sbjct: 18  TAVFLAVWETGARLYDRSFILPAPSAII-VRLYELADVLMLVHLPATLAVILTGLLISTV 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F    A     S        PI+   Q+IPI+      V++F          +  + +  
Sbjct: 77  FGVALAVWMTMSPTAERTFYPIIIASQTIPIIALAPIFVLWFGY--------SMWSKVAV 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +T + +  +  + RD++++ ++   S  Q F  L VP S+P     + ++++
Sbjct: 129 TVLITFFPITVNTFDGIRQVNRDMQDLLKTMGASKRQLFMKLTVPASLPAFYSGLKVAVT 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                V+ +    +G+ +    G+G +    + + D   +   ++
Sbjct: 189 LS---VIGA---AIGEWLGASRGLGYFSRRMMTQMDGAGVFAPIV 227



 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 11/196 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             IV  +   DVL ++ L   T+  ++  ++I+++  + + +W+   P       P    
Sbjct: 43  AIIVRLYELADVLMLVHLPA-TLAVILTGLLISTVFGVALAVWMTMSPTAERTFYPIIIA 101

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P     P+ V    Y           + +  T + I  N   G      D +++  
Sbjct: 102 SQTIPIIALAPIFVLWFGYS----MWSKVAVTVLITFFPITVNTFDGIRQVNRDMQDLLK 157

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   +  + +  + +P   P + +G   A   +   + + E          + GLG +  
Sbjct: 158 TMGASKRQLFMKLTVPASLPAFYSGLKVAVTLSVIGAAIGEWLG------ASRGLGYFSR 211

Query: 545 ESTEKGSFPEVVLGVL 560
               +     V   ++
Sbjct: 212 RMMTQMDGAGVFAPIV 227


>gi|225181817|ref|ZP_03735254.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167490|gb|EEG76304.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 245

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 17/206 (8%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPI 112
            L   ++ +Y     + +++AMV+++L       +  +   RR+G V+   ++I Q++P 
Sbjct: 42  ALTYPNVLRYLREHVVLVIAAMVLAVLVGIPVGIMLTRPKLRRIGKVIETFVNIGQTVPS 101

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  L    VY    +          A+FA++   +  +  + Y  + +I  ++ E +R  
Sbjct: 102 LAILALFFVYLGLGF--------NTALFALWLYSILPILRNTYAGITSIEPEILEAARGM 153

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            ++ W+  + + +P ++P L+  +  S        V         T I    +G  I   
Sbjct: 154 GMTPWRTLYKIELPLALPVLMAGVRTS-------TVICVGTATLATFIGGGALGDLIKTG 206

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
           I+ +  + +         +  L D L
Sbjct: 207 IQVRRDILVFTGAGLSALLAILLDYL 232



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 13/185 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           V+  +++A ++ IPVGI +       I   I+ F  +    P+     L    +      
Sbjct: 59  VIAAMVLAVLVGIPVGIMLTRPKLRRIGKVIETFVNIGQTVPSLAILALFFVYLGLGFNT 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               L L  I      IL N  AG ++   +  E A    +T WR    I LP   P  +
Sbjct: 119 ALFALWLYSIL----PILRNTYAGITSIEPEILEAARGMGMTPWRTLYKIELPLALPVLM 174

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  T+       + ++     G        LG  I    +      V  G  +     +
Sbjct: 175 AGVRTSTVICVGTATLATFIGGGA-------LGDLIKTGIQVRRDILVFTGAGLSALLAI 227

Query: 568 ALNRF 572
            L+  
Sbjct: 228 LLDYL 232


>gi|126730549|ref|ZP_01746360.1| ABC transporter, inner membrane subunit [Sagittula stellata E-37]
 gi|126709282|gb|EBA08337.1| ABC transporter, inner membrane subunit [Sagittula stellata E-37]
          Length = 253

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 81/234 (34%), Gaps = 12/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLII 395
              +  I +  +   +   + W +                    + +G  T++R V  ++
Sbjct: 8   TPVVAVIVFLLLWELLVWAMGWPNYKMASPSDLLPAYTRYWELFLVMGWQTLWRTVAGLL 67

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A ++ + +G+ +GF   +   + P      A P     P++       H   +    L+
Sbjct: 68  LAIVVGVAIGMVMGFSRTMRDALYPLLVGFNAIPKATVVPIIALMFVGMH---DFNTVLI 124

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
               + + I  ++  G S    +++++  S   +    +  I LP   P +      +  
Sbjct: 125 AFMISFFPIAVSISIGLSTLEPEYRDILRSLGASQTTIFWKIALPKTLPEFFGALKVSVT 184

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A+  + + E+ S         GLGA          +P +   ++ +    + L
Sbjct: 185 LAFIGTNLMEIVSPHGR-----GLGALFDSGKTNSDYPLMFAVLIALAFLGIVL 233



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 97/261 (37%), Gaps = 18/261 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +     +  ++ F+L+  ++   +     +   P D++       ++  +  +  +T  R
Sbjct: 4   KAFLTPVVAVIVFLLLWELLVWAMGWPNYKMASPSDLLPAYTRYWELFLVMGW--QTLWR 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++ ++++++       +   SR +   L P+L    +IP    +    + F+ ++    
Sbjct: 62  TVAGLLLAIVVGVAIGMVMGFSRTMRDALYPLLVGFNAIPKATVVPIIALMFVGMH---- 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              +   +   F    + +  S+   L  +  +  ++ RS   S    FW + +P ++P 
Sbjct: 118 ---DFNTVLIAFMISFFPIAVSISIGLSTLEPEYRDILRSLGASQTTIFWKIALPKTLPE 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
               + +S++  +      E++          G+G+         D   +   ++ +  +
Sbjct: 175 FFGALKVSVTLAFIGTNLMEIVS-----PHGRGLGALFDSGKTNSDYPLMFAVLIALAFL 229

Query: 252 IFLYDQL---LFRPMIVWSNK 269
             +   +   L +    W+ +
Sbjct: 230 GIVLYYVVVALEKIFAGWAER 250


>gi|114327931|ref|YP_745088.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316105|gb|ABI62165.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 330

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 10/201 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      ++  + +   + +      G+ IG+   +     P  +LL   PA  + 
Sbjct: 125 DWPRLGNSIGHSLILLGLGYGLGAATGFVTGVAIGWSRAVGYWAHPVLRLLGPLPATAWL 184

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL                  L+   + + +     +G S+    + ++A +         
Sbjct: 185 PLAFFFFPSSFS----ASIFLIALASGFPVAVLTWSGVSSVAAAYYDIARTLGAKPRFLV 240

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P    G     G +++  +V+E+           GLG Y+  +    ++  
Sbjct: 241 LKVAIPAAMPSVFVGLFMGLGASFSVLVVAEMMG------VKAGLGWYLTWAQGWAAYAN 294

Query: 555 VVLGVLIMCCFVLALNRFLWH 575
           +   +L+M      L   L+ 
Sbjct: 295 MYAALLLMALMCSGLIALLFR 315



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 14/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      + + +     +     FV       SR +G    P+L ++  +P   +L
Sbjct: 125 DWPRLGNSIGHSLILLGLGYGLGAATGFVTGVAIGWSRAVGYWAHPVLRLLGPLPATAWL 184

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +F + +   +    LA+ F +            +  + ++     +++R+     
Sbjct: 185 PLAFFFFPSSFSASIFLIALASGFPVAVL--------TWSGVSSVAAAYYDIARTLGAKP 236

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P +MP +   + M +   +  +V +EM+ V        G+G Y+  A    
Sbjct: 237 RFLVLKVAIPAAMPSVFVGLFMGLGASFSVLVVAEMMGVKA------GLGWYLTWAQGWA 290

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               +  A+L M  +      LLFR
Sbjct: 291 AYANMYAALLLMALMCSGLIALLFR 315


>gi|116249737|ref|YP_765575.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254385|emb|CAK04016.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 272

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++I  + +G+ IG  P++ + + PF  +++  P     P++   +  
Sbjct: 76  GASLIRLFAGLGISTITALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILFIAMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ G    ++ ++   A   P +    A +   + W+    ++LP I 
Sbjct: 136 GEASK----IALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G AW   I +E  S        +GLG  I       S   +   V+ + 
Sbjct: 192 PRLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDIIFPYVVWIT 245

Query: 564 CFVLALNRFL 573
              + +N  L
Sbjct: 246 LLAVIMNYIL 255



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+ + + IS +   V   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDTGASLIRLFAGLGISTITALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 131 IAMGLG--------EASKIALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           I   ++ +  +  + + +L R  I 
Sbjct: 237 IFPYVVWITLLAVIMNYILDRIRIA 261


>gi|15643251|ref|NP_228295.1| ABC transporter permease [Thermotoga maritima MSB8]
 gi|4980996|gb|AAD35570.1|AE001726_4 ABC transporter, permease protein, cysTW family [Thermotoga
           maritima MSB8]
          Length = 250

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 87/214 (40%), Gaps = 14/214 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
               +  I       + +  +P+    ++        L  ++  T L   S +VI L+  
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L    + +  V+ PIL I Q+IPI+      +++F      K        I  + 
Sbjct: 71  VGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK--------IGIVA 122

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +  +    I +D  ++ +  + +  Q + YL +P ++P ++  + +S    
Sbjct: 123 FVTLFPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKIS---A 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            + VV++   V+G+ +    G+G Y+  A+    
Sbjct: 180 TYAVVSA---VIGEWLGAEKGLGIYMIRAMNTFR 210



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           W   +  + +    +   Y++                ++     T+      ++I  ++ 
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + +     +   + P   +  A P     PLV+                ++ F T 
Sbjct: 71  VGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK----IGIVAFVTL 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N + G      D  ++      T  + +RY++LP   PY ++G   +   A  ++
Sbjct: 127 FPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKISATYAVVSA 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAES 546
           ++ E            GLG Y+  +
Sbjct: 187 VIGEWLGAEK------GLGIYMIRA 205


>gi|39936446|ref|NP_948722.1| taurine transport system permease [Rhodopseudomonas palustris
           CGA009]
 gi|39650301|emb|CAE28824.1| possible taurine transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 82/234 (35%), Gaps = 16/234 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCIT------MFRVVVLIIIASI 399
                +  +A    W +   + +   T +D    IW G +T      M RV   I IA +
Sbjct: 24  LLLFGIWWLAARGGWVNKDLLPSPVDTLRDTAAAIWSGSMTKDFWHTMVRVAYSIAIAIV 83

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +PVGI +G +  +   ++       + PA   FPL +       L      +      
Sbjct: 84  AGVPVGIVLGAKAAVYRSVEFIVDFFRSTPATAMFPLFLLLFGLGDLAKIAVAAFAAWLV 143

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+FNV  G           A S   +  R +R +I     P    G  TA   A  
Sbjct: 144 ----IVFNVAYGVMNARQTRILAARSMGASSLRIFRDVIFFETLPQTFIGLRTAVSLALV 199

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             IV+E+         T G+G  I ++    S  ++   +LI       LN  L
Sbjct: 200 VIIVAEMFIGA-----TDGMGHRIIDAQISYSLTDMYGSILIAGAMGYGLNLIL 248



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 96/274 (35%), Gaps = 20/274 (7%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDV 58
           +   +    + R+   I   +  +L+ GI  +   G          P D +      +  
Sbjct: 1   MQTAISKVSTARLRRAIELAVGPLLLFGIWWLAARGGWVNKDLLPSPVDTLRDTAAAIWS 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+ +    T +R+  ++ I+++       +      +   +  I+D  +S P       
Sbjct: 61  GSMTKDFWHTMVRVAYSIAIAIVAGVPVGIVLGAKAAVYRSVEFIVDFFRSTPATAMFPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F      K+  A  AA   I         F++   + N  +     +RS   S  +
Sbjct: 121 FLLLFGLGDLAKIAVAAFAAWLVI--------VFNVAYGVMNARQTRILAARSMGASSLR 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +    ++P     +  ++S     ++ +EM +         G+G  I  A     L
Sbjct: 173 IFRDVIFFETLPQTFIGLRTAVSLALVVIIVAEMFIGATD-----GMGHRIIDAQISYSL 227

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             +  ++L    + +  + +L    R ++ WS K
Sbjct: 228 TDMYGSILIAGAMGYGLNLILLFIERSIVHWSGK 261


>gi|284992594|ref|YP_003411148.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284065839|gb|ADB76777.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 307

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 93/236 (39%), Gaps = 19/236 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + +++V  ++ +L+ G     +   +  ++ ++L+   L     +T   +L A VI+   
Sbjct: 49  VVWIVVFTLVALLVRGW-GLALYTVLAFLLVVSLE---LWVETMQTLALVLVAAVIATAI 104

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LAA++R L +V+ P+LD MQ+ P+  +L   V               +  + A 
Sbjct: 105 GVPIGILAARNRALSVVVRPVLDSMQTTPVFVYLIPAVF--------FFGVGVVPGVVAT 156

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  + R++ E + +F     Q    + +P ++P ++  +   +  
Sbjct: 157 ILFAIPPGVRLTELGIRQVDREVVEAAHAFGARPGQILREVQLPLALPSIMAGINQVIML 216

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + ++        +         A+ + D+ +     L ++ +    D++
Sbjct: 217 ALSMVVTAGLLGAAGLGAVV-------VRAVTQLDVASGFEGGLAVVLLAIFLDRV 265



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 72/225 (32%), Gaps = 8/225 (3%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +G    +F   L   V  L   +  +     +   +  +       + +F    +     
Sbjct: 6   LGQWVSDFIDWLLATVPWLFDAISAVMQVLVDGLTEALATPPPVVWIVVFTLVALLVRGW 65

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+A  ++   +   + +  +  +     T+  V+V  +IA+ I +P+GI       +S  
Sbjct: 66  GLALYTVLAFLLVVSLELWVETMQ----TLALVLVAAVIATAIGVPIGILAARNRALSVV 121

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P    +   P  V+    V       +   +   L  I             G      
Sbjct: 122 VRPVLDSMQTTPVFVYLIPAVFFFGVGVVPGVVATILFAIPPGVRL----TELGIRQVDR 177

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +  E A +F     +  R + LP   P  + G       A +  +
Sbjct: 178 EVVEAAHAFGARPGQILREVQLPLALPSIMAGINQVIMLALSMVV 222


>gi|197123695|ref|YP_002135646.1| substrate-binding region of ABC-type glycine betaine transporter
           [Anaeromyxobacter sp. K]
 gi|196173544|gb|ACG74517.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Anaeromyxobacter sp. K]
          Length = 490

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                + +  A+  ++L       LAA+  RLG +++ ++ ++Q++P L  L F +    
Sbjct: 294 TLEHLVLVAVALTGAILAAVPLGVLAARRPRLGRLVLALVGVVQTVPSLALLVFMIPLLG 353

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        AI A+F   +  +  + +  L  +  +L E + +  L    +   + 
Sbjct: 354 IGARP--------AIAALFLYGLLPIVRNTHAGLTGLAPELRESAEALGLPPLARLRLVE 405

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P + P ++  +  S       V+      +G  ++   G G  I   I+   +  IL  
Sbjct: 406 LPLATPAILAGVKTS------AVITVGTATLG-ALVGAGGYGQPILTGIRLLSVPLILEG 458

Query: 245 MLTMLGVIFLYDQLL 259
            +    +      L 
Sbjct: 459 AVPAALLALGVQGLF 473



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 16/199 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V +  A +  +P+G+    RP +   +     ++   P+      ++  +     
Sbjct: 298 LVLVAVALTGAILAAVPLGVLAARRPRLGRLVLALVGVVQTVPSLALLVFMIPLLGIGAR 357

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      I+ N  AG +    + +E A +  +      R + LP   P  
Sbjct: 358 PAIAALFLYGLL----PIVRNTHAGLTGLAPELRESAEALGLPPLARLRLVELPLATPAI 413

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + +  +   G       G G  I       S P ++ G +      
Sbjct: 414 LAGVKTSAVITVGTATLGALVGAG-------GYGQPILTGIRLLSVPLILEGAVPAALLA 466

Query: 567 LALNRFLWHPLYLYGTRCL 585
           L +       L+    + L
Sbjct: 467 LGV-----QGLFDLAEKVL 480


>gi|160902607|ref|YP_001568188.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160360251|gb|ABX31865.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 244

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 88/231 (38%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +   F F +     +    + +  ++N  +       +W    T+++ ++++ ++S I I
Sbjct: 13  LWYFFSFVIGSSFVLPFPHEVLVNLINQLSTPRFYVALWN---TVWKTLIVLFLSSFIGI 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G  +G    I    +P   ++ A P   +   VV         P L  ++ ++  T  
Sbjct: 70  ILGFLMGMSDTIYEIFRPMLMMIQAIPVVSWLAFVVFLWGVGWRGPILISTMAILPNT-- 127

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +F   +G         E+   + ++  + +R++ L  I P+ +     + G  W   +
Sbjct: 128 --VFTTASGIKNIDRKLLEMVHLYKVSRSKIFRHVYLASIVPFVIAAVEVSIGNVWKVVL 185

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E    G+      GLG  +A + +    P +    +I     +   R  
Sbjct: 186 VTEFLVGGN------GLGVELAWARQYVEVPRIYAITIIAVILGITTERVF 230



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF ++  VL+    + ++        P +++  +   L           T  + L  + +
Sbjct: 4   IFGIVLIVLLWYFFSFVIGSSFVLPFPHEVLVNLINQLSTPRFYVALWNTVWKTLIVLFL 63

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S     +   L   S  +  +  P+L ++Q+IP++ +L F V  +   + G ++ + +A 
Sbjct: 64  SSFIGIILGFLMGMSDTIYEIFRPMLMMIQAIPVVSWLAFVVFLWGVGWRGPILISTMAI 123

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
                   + N  F+    + NI R L E+   +++S  + F ++ +   +P ++  + +
Sbjct: 124 --------LPNTVFTTASGIKNIDRKLLEMVHLYKVSRSKIFRHVYLASIVPFVIAAVEV 175

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+   W  V+ +E +V G+      G+G  +A A +  ++  I    +  + +    +++
Sbjct: 176 SIGNVWKVVLVTEFLVGGN------GLGVELAWARQYVEVPRIYAITIIAVILGITTERV 229

Query: 259 L 259
            
Sbjct: 230 F 230


>gi|134282421|ref|ZP_01769126.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|134246459|gb|EBA46548.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 313

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|56476604|ref|YP_158193.1| putative ABC transporter, permease protein [Aromatoleum aromaticum
           EbN1]
 gi|56312647|emb|CAI07292.1| putative ABC transporter, permease protein [Aromatoleum aromaticum
           EbN1]
          Length = 265

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 14/237 (5%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
            ++G      P      +   +   +     + T  R L  + I++         A  S 
Sbjct: 39  AIYGSLILPDPLTTFATLADLVTTGAAWPELAVTARRALIGLAIAVAIGTALGLAAGVSV 98

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
              M+  P++ ++   P + +L   +++F       V    +A    IF   +       
Sbjct: 99  TASMMSRPLVTVLLGTPPIAWLVLAMLWFGASDGTPVFTVVVACFPVIFVGAL------- 151

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            Q    +   L++++ +FRL    KF+ L +P  +  L    + ++   W  VV +E++ 
Sbjct: 152 -QGTRTLDHHLKDMAHAFRLPARMKFFDLYLPHVVSYLFPAWITALGTAWKVVVMAELLS 210

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
             D      G+G+ +A+     D    L  +  ++G +   + L+  P+     ++R
Sbjct: 211 SSD------GVGAALAVTRSHLDTAGTLAWICAVVGSLLAVEYLMLEPVKREVERWR 261



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 80/264 (30%), Gaps = 10/264 (3%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L       P              +L   W          I    +               
Sbjct: 6   LRAWIGGLPAYLWSGWGAIASLLLLLAAWEGGSAIYGSLILPDPLTTFATLADLVTTGAA 65

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                +T  R ++ + IA  I   +G+  G     S   +P   +L   P   +  L + 
Sbjct: 66  WPELAVTARRALIGLAIAVAIGTALGLAAGVSVTASMMSRPLVTVLLGTPPIAWLVLAML 125

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                   P       ++      I    + G     +  K++A +F +     +  + L
Sbjct: 126 WFGASDGTP----VFTVVVACFPVIFVGALQGTRTLDHHLKDMAHAFRLPARMKFFDLYL 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P +  Y     ITA G AW   +++E+ S       + G+GA +A +         +  +
Sbjct: 182 PHVVSYLFPAWITALGTAWKVVVMAELLS------SSDGVGAALAVTRSHLDTAGTLAWI 235

Query: 560 LIMCCFVLALNRFLWHPLYLYGTR 583
             +   +LA+   +  P+     R
Sbjct: 236 CAVVGSLLAVEYLMLEPVKREVER 259


>gi|145221319|ref|YP_001131997.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|145213805|gb|ABP43209.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
          Length = 273

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T  R+ + ++I +    +   L      L  VL P L  ++++P L +    V
Sbjct: 75  LWEHLYMTLRRVFAGVLIGVALGVLLGLLMGSVPWLRSVLEPWLTFLRALPPLAYFFLLV 134

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    LAA+ A        +  +           L E +R+   S  Q  
Sbjct: 135 IWLGIDEAPKITLLALAALPAAAVPTTAAVVAAPVG--------LTEAARALGASRGQVI 186

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P     + +++   +  VVA+E+         +PG+G  +  A    +   
Sbjct: 187 RDVVIPSALPETFTGIRLAVGMAYSAVVAAELF------NGIPGVGGLVKDASNYNNTPV 240

Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           +L  +  +     + D LL    R  + W
Sbjct: 241 VLVGIFAIGISGLVIDGLLRAAERRSVPW 269



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 14/267 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P      +L R    +        +   +     +      +      A      +   
Sbjct: 7   RPARQWRSRLARAALPLLSVVVFGVVWQLAAASGIWNQTFVPYPATVWNAFVDVSTTHDG 66

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +  +  Y    ++     +T+ RV   ++I   + + +G+ +G  P + S ++P+   L 
Sbjct: 67  VRGYAGYLLWEHL----YMTLRRVFAGVLIGVALGVLLGLLMGSVPWLRSVLEPWLTFLR 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P   +F L+V  +          L+L  +            A   A P    E A + 
Sbjct: 123 ALPPLAYFFLLVIWLGIDEAPKITLLALAALPAAAVP----TTAAVVAAPVGLTEAARAL 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +  R +++P   P   TG   A G A++A + +E+ +         G+G  + ++
Sbjct: 179 GASRGQVIRDVVIPSALPETFTGIRLAVGMAYSAVVAAELFNG------IPGVGGLVKDA 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   + P V++G+  +    L ++  L
Sbjct: 233 SNYNNTPVVLVGIFAIGISGLVIDGLL 259


>gi|254179876|ref|ZP_04886475.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|184210416|gb|EDU07459.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
          Length = 313

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|323697512|ref|ZP_08109424.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323457444|gb|EGB13309.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 262

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 12/220 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +    W+         I    +      +       V     +T  R +    +A+++  
Sbjct: 24  LFLALWWVGSLCYGPFILPSPLEACRALWRLTLEGAVGKAALVTAGRALGGFAVAAVLGS 83

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            VGI  G  P ++  ++P   +L   P   +  L +       L P   + +     T  
Sbjct: 84  TVGILAGLHPALARTLRPITAMLLGIPPIAWIVLAMLWFGTTGLTPVFTVVV-----TAL 138

Query: 463 YILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            I+F V   GA       +++  SF       +  + LP I  Y   G +TA G +W  +
Sbjct: 139 PIVFAVAVEGARTRDRGLEDMGRSFDTPPAMLFLDVRLPHILSYLFPGWVTALGLSWKVA 198

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           +++E+ +       T G+GA +A +       +V+  +++
Sbjct: 199 VMAELLA------STDGIGADLALARVNLETADVLAWIIV 232



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 14/225 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A  L +  +  L +G      P +    +       ++ + A  T  R L    ++ + 
Sbjct: 22  VALFLALWWVGSLCYGPFILPSPLEACRALWRLTLEGAVGKAALVTAGRALGGFAVAAVL 81

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 LA     L   L PI  ++  IP + ++   +++F       V    + A+  +
Sbjct: 82  GSTVGILAGLHPALARTLRPITAMLLGIPPIAWIVLAMLWFGTTGLTPVFTVVVTALPIV 141

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   V        +      R LE++ RSF       F  + +P  +  L    + ++  
Sbjct: 142 FAVAV--------EGARTRDRGLEDMGRSFDTPPAMLFLDVRLPHILSYLFPGWVTALGL 193

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            W   V +E++   D      GIG+ +ALA    +   +L  ++ 
Sbjct: 194 SWKVAVMAELLASTD------GIGADLALARVNLETADVLAWIIV 232


>gi|296327651|ref|ZP_06870194.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
 gi|296155241|gb|EFG96015.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
          Length = 257

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + ++   + A +      +  ++ P+L
Sbjct: 36  PTPLEIANAFVRDRALFLFHFKITMLEALIGLALGIIIASLLAIIMDSFETINRIVYPLL 95

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 96  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 147

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 148 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 201

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 202 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 238



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +  II   + I +     I+  + P        P     P++V  + Y 
Sbjct: 58  ITMLEALIGLALGIIIASLLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWLGY- 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 117 ---DMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALT 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 227

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 228 ISLISMELVKR 238


>gi|256832834|ref|YP_003161561.1| binding-protein-dependent transport systems inner membrane
           component [Jonesia denitrificans DSM 20603]
 gi|256686365|gb|ACV09258.1| binding-protein-dependent transport systems inner membrane
           component [Jonesia denitrificans DSM 20603]
          Length = 295

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 22/242 (9%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P  F ++  ++V+G++         + V   ++  V            A  T   +L A 
Sbjct: 49  PPAFVIIGAIVVLGLLARGWLFALLSGVGLVLIMAVDQ-------WDNAMDTFALVLVAA 101

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I++L        AAK + + MV+ P +D +Q++P   +L   ++ F             
Sbjct: 102 TIAILLAVPLGIAAAKVQWVSMVVRPFMDFLQTMPAFVYLIPALLLFRVGVAPG------ 155

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I A     +          +  + R+  E  ++F  +  +    + +P +MP ++  +
Sbjct: 156 --IVATILFAMPPGVRLTELGIRGVNRETVEAGQAFGATPGRILRQIQLPLAMPSIMAGI 213

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
              +      VV + ++  G            I  A+   D    + A L+++ +  + D
Sbjct: 214 NQVIMLSLSMVVIAGLVGAGGLGGD-------IIAALNRLDTALGVEAGLSVVILAMVLD 266

Query: 257 QL 258
           +L
Sbjct: 267 RL 268



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 76/262 (29%), Gaps = 12/262 (4%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             V       GV+R  F   +  +           I    VV G+ +   W         
Sbjct: 19  WVVANASAFFGVLRSIFLGAYDGVNWVLATPPAFVIIGAIVVLGL-LARGWLFALLSGVG 77

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                 +        T   V+V   IA ++ +P+GI       +S  ++PF   L   PA
Sbjct: 78  LVLIMAVDQWDNAMDTFALVLVAATIAILLAVPLGIAAAKVQWVSMVVRPFMDFLQTMPA 137

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+    +           +   L          +     G      +  E   +F  T 
Sbjct: 138 FVYLIPALLLFRVGVAPGIVATILF----AMPPGVRLTELGIRGVNRETVEAGQAFGATP 193

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R  R I LP   P  + G       + +  +++ +   G +          I  +  + 
Sbjct: 194 GRILRQIQLPLAMPSIMAGINQVIMLSLSMVVIAGLVGAGGLGGD-------IIAALNRL 246

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
                V   L +    + L+R 
Sbjct: 247 DTALGVEAGLSVVILAMVLDRL 268


>gi|52081951|ref|YP_080742.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus licheniformis ATCC 14580]
 gi|52787335|ref|YP_093164.1| OpuCB [Bacillus licheniformis ATCC 14580]
 gi|319647814|ref|ZP_08002032.1| OpuCB protein [Bacillus sp. BT1B_CT2]
 gi|52005162|gb|AAU25104.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Bacillus licheniformis ATCC 14580]
 gi|52349837|gb|AAU42471.1| OpuCB [Bacillus licheniformis ATCC 14580]
 gi|317390155|gb|EFV70964.1| OpuCB protein [Bacillus sp. BT1B_CT2]
          Length = 217

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 83/203 (40%), Gaps = 19/203 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +           + A+++ ++F      +  + ++   V++ +++I+Q++P L  L F
Sbjct: 13  GEMLYKTWEHLYISIFAVLLGIIFAVPLGVVLTRMKKGAGVVIGVVNIIQTLPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ AI A+F   V  +  + Y  +  + ++L E  +   ++ W+
Sbjct: 73  FIPLLGVG--------KIPAIVALFFYSVLPILRNTYTGVKGVNQNLLESGKGIGMTAWE 124

Query: 179 KFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +   + +P S+P ++  +  S     GW  + A          I   G+G YI + +   
Sbjct: 125 QIRLVELPLSVPVIMAGIRTSTVYLIGWATLSA---------FIGGGGLGDYIFIGLNLY 175

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               I+   + +  +  + D +L
Sbjct: 176 QPEYIIAGAVPVTILAIVIDYIL 198



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 62/187 (33%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +  +++  I  +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISIFAVLLGIIFAVPLGVVLTRMKKGAGVVIGVVNIIQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +T W   R + LP   P  
Sbjct: 81  --KIPAIVALFFYSVLPILRNTYTGVKGVNQNLLESGKGIGMTAWEQIRLVELPLSVPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + +S     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSTVYLIGWATLSAFIGGG-------GLGDYIFIGLNLYQPEYIIAGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 IVIDYIL 198


>gi|148261714|ref|YP_001235841.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|146403395|gb|ABQ31922.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
          Length = 272

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + IA+ I   +GI +G  P++   + PF    +  P     P++      
Sbjct: 76  LASLRRILSGLAIATAISFGLGILVGMVPYLRKLLLPFITAFSMVPPLAVLPILFIIAGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++ GT  YI+ +++      P      A +   + W+    +++P + 
Sbjct: 136 GET----AKVALIVIGTAPYIVRDLVLRVEELPRAQMIKAQTLGASSWQIALRVVVPQMA 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +         GLG  I       +   ++  VL + 
Sbjct: 192 PRLIDSLRLSLGPAWLYLISAEAIA------AQDGLGYRIFLVRRYFAMDIIIPYVLWIT 245

Query: 564 CFVLALN 570
              +  +
Sbjct: 246 LLAVVFD 252



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 89/232 (38%), Gaps = 20/232 (8%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+  +  +  G++E  + RD+          + L      +  R+LS + I+   +F   
Sbjct: 44  VLPTLAQMAAGMREMALTRDMATGQ------YPLLADTLASLRRILSGLAIATAISFGLG 97

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L      L  +L+P +     +P L  L    +             E A +  I     
Sbjct: 98  ILVGMVPYLRKLLLPFITAFSMVPPLAVLPILFIIAGIG--------ETAKVALIVIGTA 149

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +   +   +  +PR     +++   S WQ    + VP   P L+ ++ +S+   W ++
Sbjct: 150 PYIVRDLVLRVEELPRAQMIKAQTLGASSWQIALRVVVPQMAPRLIDSLRLSLGPAWLYL 209

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +++E I   D      G+G  I L  +   +  I+  +L +  +  ++D  L
Sbjct: 210 ISAEAIAAQD------GLGYRIFLVRRYFAMDIIIPYVLWITLLAVVFDAAL 255


>gi|260425362|ref|ZP_05779342.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
 gi|260423302|gb|EEX16552.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
          Length = 254

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 8/184 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R V  + IA +    +G+ +GF       + P      A P     P++       H
Sbjct: 59  TLWRTVAGLGIAVVAGTLIGMVMGFSRIARDGLYPLLVGFNAVPKATLVPVLALLFIGQH 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N    L+    + + I  +V  G S    +++++  S   + +  +R I LP   P 
Sbjct: 119 ---NFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASRFTIFRKIALPKTLPE 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      +   A+  + + E+ S         GLGA         ++P +   ++ +   
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIISPHGK-----GLGALFLSGQTNSNYPLMFAVLIALAVL 230

Query: 566 VLAL 569
            + L
Sbjct: 231 GILL 234



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 73/206 (35%), Gaps = 15/206 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T  R ++ + I+++   +   +   SR     L P+L    ++P    +    + F+  
Sbjct: 58  QTLWRTVAGLGIAVVAGTLIGMVMGFSRIARDGLYPLLVGFNAVPKATLVPVLALLFIGQ 117

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +           +   F    + +  S+   L  +  +  ++ RS   S +  F  + +P
Sbjct: 118 H-------NFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASRFTIFRKIALP 170

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P     + +S++  +      E+I          G+G+         +   +   ++
Sbjct: 171 KTLPEFFGALKVSVTLAFIGTNLVEIISPHGK-----GLGALFLSGQTNSNYPLMFAVLI 225

Query: 247 TMLGVIFLY---DQLLFRPMIVWSNK 269
            +  +  L       L R    W+ +
Sbjct: 226 ALAVLGILLYYAVVALERIFAGWAER 251


>gi|30260548|ref|NP_842925.1| ABC transporter, permease protein, putative [Bacillus anthracis
           str. Ames]
 gi|47525652|ref|YP_017001.1| ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor']
 gi|65317811|ref|ZP_00390770.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|196034759|ref|ZP_03102167.1| putative ABC transporter, permease protein [Bacillus cereus W]
 gi|196040160|ref|ZP_03107462.1| putative ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196045216|ref|ZP_03112448.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218901582|ref|YP_002449416.1| putative ABC transporter, permease protein [Bacillus cereus AH820]
 gi|225862420|ref|YP_002747798.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|254686770|ref|ZP_05150628.1| ABC transporter, permease [Bacillus anthracis str. CNEVA-9066]
 gi|254724846|ref|ZP_05186629.1| ABC transporter, permease [Bacillus anthracis str. A1055]
 gi|254739007|ref|ZP_05196709.1| ABC transporter, permease [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744594|ref|ZP_05202273.1| ABC transporter, permease [Bacillus anthracis str. Kruger B]
 gi|254756149|ref|ZP_05208178.1| ABC transporter, permease [Bacillus anthracis str. Vollum]
 gi|254761967|ref|ZP_05213816.1| ABC transporter, permease [Bacillus anthracis str. Australia 94]
 gi|300118999|ref|ZP_07056710.1| ABC transporter, permease [Bacillus cereus SJ1]
 gi|30253916|gb|AAP24411.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Ames]
 gi|47500800|gb|AAT29476.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|195992802|gb|EDX56762.1| putative ABC transporter, permease protein [Bacillus cereus W]
 gi|196023800|gb|EDX62475.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|196029015|gb|EDX67620.1| putative ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|218537403|gb|ACK89801.1| putative ABC transporter, permease protein [Bacillus cereus AH820]
 gi|225788759|gb|ACO28976.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|298723615|gb|EFI64346.1| ABC transporter, permease [Bacillus cereus SJ1]
          Length = 257

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F            L  +  
Sbjct: 76  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGM--------LPKVMV 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 128 VILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|326405207|ref|YP_004285289.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052069|dbj|BAJ82407.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 272

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + IA+ I   +GI +G  P++   + PF    +  P     P++      
Sbjct: 76  LASLRRILSGLAIATAISFGLGILVGMVPYLRKLLLPFITAFSMVPPLAVLPILFIIAGI 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++ GT  YI+ +++      P      A +   + W+    +++P + 
Sbjct: 136 GET----AKVALIVIGTAPYIVRDLVLRVEELPRAQMIKAQTLGASSWQIALRVVVPQMA 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +         GLG  I       +   ++  VL + 
Sbjct: 192 PRLIDSLRLSLGPAWLYLISAEAIA------AQDGLGYRIFLVRRYFAMDIIIPYVLWIT 245

Query: 564 CFVLALN 570
              +  +
Sbjct: 246 LLAVVFD 252



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 89/232 (38%), Gaps = 20/232 (8%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+  +  +  G++E  + RD+          + L      +  R+LS + I+   +F   
Sbjct: 44  VLPTLAQMAAGMREMALTRDMATGQ------YPLLADTLASLRRILSGLAIATAISFGLG 97

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L      L  +L+P +     +P L  L    +             E A +  I     
Sbjct: 98  ILVGMVPYLRKLLLPFITAFSMVPPLAVLPILFIIAGIG--------ETAKVALIVIGTA 149

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +   +   +  +PR     +++   S WQ    + VP   P L+ ++ +S+   W ++
Sbjct: 150 PYIVRDLVLRVEELPRAQMIKAQTLGASSWQIALRVVVPQMAPRLIDSLRLSLGPAWLYL 209

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +++E I   D      G+G  I L  +   +  I+  +L +  +  ++D  L
Sbjct: 210 ISAEAIAAQD------GLGYRIFLVRRYFAMDIIIPYVLWITLLAVVFDAAL 255


>gi|163734334|ref|ZP_02141774.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
 gi|161392342|gb|EDQ16671.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
          Length = 247

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 14/231 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VLV+    I   G+    +P   +    I      L ++A  T   +L  +++     F
Sbjct: 13  LVLVLWQTVIWATGVARFILPPPALVGQTIWESRALLTEHALVTMAEVLIGLMLGAALGF 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V A     S     ++ PIL   Q++P+        ++       KV  A +   F    
Sbjct: 73  VSAIGLVASPTARALVRPILVFSQAVPVFALAPILTLWLGFGLWSKVTMAIIIIYF---- 128

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +T S + +L    RD   +++    S  +  W++ +P ++PG    + ++     
Sbjct: 129 ----PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWHIRIPAALPGFASGLRLA----- 179

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             V A    ++G+ V    G+G  + LA        +  A++ +  +  L 
Sbjct: 180 -AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKTDLMFAALIVLAVLTVLL 229



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  V+    +         +V    ++    +     +TM  V++ +++ + +  
Sbjct: 13  LVLVLWQTVIWATGVARFILPPPALVGQTIWESRALLTEHALVTMAEVLIGLMLGAALGF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I +   P   + ++P      A P     P++   + +   +      +++ F    
Sbjct: 73  VSAIGLVASPTARALVRPILVFSQAVPVFALAPILTLWLGFGLWSKVTMAIIIIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +          D+  +A     +  R   +I +P   P + +G   A   A   +I
Sbjct: 129 PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWHIRIPAALPGFASGLRLAAVYAPIGAI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          + GLG  +  +  +     +   ++++    + L
Sbjct: 189 IGEWVG------ASKGLGYLMLLANGRAKTDLMFAALIVLAVLTVLL 229


>gi|256423944|ref|YP_003124597.1| glycine/betaine ABC transporter ATP-binding protein [Chitinophaga
           pinensis DSM 2588]
 gi|256038852|gb|ACU62396.1| binding-protein-dependent transport systems inner membrane
           component [Chitinophaga pinensis DSM 2588]
          Length = 522

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 15/204 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L +   +       +++I+++       L  + ++L   ++ I  ++Q+IP +  L 
Sbjct: 15  AGKLLEQTLQHIGLTFISLLIAVVIGVPLGILITRKKKLAGAILGIAGVLQTIPSIALLG 74

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +                 AI A+F   +  +  + Y  +  +   + + +    +S  
Sbjct: 75  FMIPLLGIG--------AKPAIVALFLYALLPIIRNTYTGILQVDPTVIDAATGMGMSQQ 126

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P +MP ++  +  +        V +  +      I   G+G +I   I   +
Sbjct: 127 QLLLKVQLPLAMPVILAGIRTA-------TVINVGVATLAAYIAAGGLGEFIFGGIALNN 179

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
              IL   +    +  L+D  + R
Sbjct: 180 TNMILAGAIPAALLAILFDAGVAR 203



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 67/203 (33%), Gaps = 11/203 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
              F  Q    ++      +    + ++IA +I +P+GI I  +  ++  I   A +L  
Sbjct: 7   FPEFVQQQAGKLLEQTLQHIGLTFISLLIAVVIGVPLGILITRKKKLAGAILGIAGVLQT 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+      ++  +            + +       I+ N   G         + A+   
Sbjct: 67  IPSIALLGFMIPLLGIGAK----PAIVALFLYALLPIIRNTYTGILQVDPTVIDAATGMG 122

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++  +    + LP   P  + G  TA       + ++   + G       GLG +I    
Sbjct: 123 MSQQQLLLKVQLPLAMPVILAGIRTATVINVGVATLAAYIAAG-------GLGEFIFGGI 175

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
              +   ++ G +      +  +
Sbjct: 176 ALNNTNMILAGAIPAALLAILFD 198


>gi|225619832|ref|YP_002721089.1| putative ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214651|gb|ACN83385.1| putative ABC transporter, permease protein [Brachyspira
           hyodysenteriae WA1]
          Length = 242

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + LR+L    +S L  F+    A     L   L+PI++ +++IP +  +   +++F 
Sbjct: 56  LLSSLLRVLITFALSFLSAFIIGISAGIFLPLRYTLIPIINFIRTIPTIPLILVAIIWFD 115

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N      I   +  IF I    + N        + N+ + L E+S S+ +S   +   L 
Sbjct: 116 NN--TVPIFVSMLVIFPIIYDSITN-------GIINVDKKLIEMSISYNVSIKTQIINLY 166

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P+  P +   +  SM   W  ++A+E++ +     P  GIG+ +  +    D +++   
Sbjct: 167 IPYIKPYIFTGISQSMGITWKSILAAEILAL-----PALGIGTKLYESHLYLDSVSLFAY 221

Query: 245 MLTMLGVIFLYDQLL 259
            L  +    +++ ++
Sbjct: 222 CLIAIIFNGIFEIII 236



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 12/191 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++   ++ +    +GI  G    +   + P    +   P     PL++  + +
Sbjct: 57  LSSLLRVLITFALSFLSAFIIGISAGIFLPLRYTLIPIINFIRTIPT---IPLILVAIIW 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  N    + + +     + I++ ++  G         E++ S++++       + +P I
Sbjct: 114 FDNN---TVPIFVSMLVIFPIIYDSITNGIINVDKKLIEMSISYNVSIKTQIINLYIPYI 170

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY  TG   + G  W + + +E+ +     L   G+G  + ES        +    LI 
Sbjct: 171 KPYIFTGISQSMGITWKSILAAEILA-----LPALGIGTKLYESHLYLDSVSLFAYCLIA 225

Query: 563 CCFVLALNRFL 573
             F       +
Sbjct: 226 IIFNGIFEIII 236


>gi|163793083|ref|ZP_02187059.1| Binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
 gi|159181729|gb|EDP66241.1| Binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
          Length = 255

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + +  I+  L             V    +      L  +A  T   +L  +V+    
Sbjct: 15  VGLIALWQIVVWLTAAPPYILPGPARVAAAWVERSPI-LLHHAGITVTEILLGLVLGATV 73

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               AT+    R +   L+P+L + Q+IP+       V++       KV+ A L   F +
Sbjct: 74  GLSTATVLHTFRPVRPWLLPVLVVSQAIPVFALAPLLVLWLGYGLASKVVMAALIIFFPV 133

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T+         Y  L  +     + +R+    G Q F  + +P ++P L   + ++ + 
Sbjct: 134 TTA--------FYDGLRRVEPLWIDAARTLGCQGPQLFRRVRIPAALPALASGLRVATA- 184

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL--- 259
                VA    VVG+ V    G+G  +  A     +  +  A+ T+  +       +   
Sbjct: 185 -----VAPIGAVVGEWVGSSAGLGYLMLHANGRMQIDLMFAALFTLAILSVALYTAVDAG 239

Query: 260 FRPMIVWS 267
            R  + W 
Sbjct: 240 LRRAMPWQ 247



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 80/237 (33%), Gaps = 10/237 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L     ++  L   W  VV   A           V     +    ++    IT+  +++
Sbjct: 6   RLARPATIAVGLIALWQIVVWLTAAPPYILPGPARVAAAWVERSPILLHHAGITVTEILL 65

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +++ + + +     +     +   + P   +  A P     PL+V  + Y   +  +  
Sbjct: 66  GLVLGATVGLSTATVLHTFRPVRPWLLPVLVVSQAIPVFALAPLLVLWLGYGLASKVVMA 125

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L++ F     +      G       + + A +    G + +R + +P   P   +G   
Sbjct: 126 ALIIFF----PVTTAFYDGLRRVEPLWIDAARTLGCQGPQLFRRVRIPAALPALASGLRV 181

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   A   ++V E          + GLG  +  +  +     +   +  +    +AL
Sbjct: 182 ATAVAPIGAVVGEWVG------SSAGLGYLMLHANGRMQIDLMFAALFTLAILSVAL 232


>gi|315223567|ref|ZP_07865422.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Capnocytophaga ochracea F0287]
 gi|314946483|gb|EFS98477.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Capnocytophaga ochracea F0287]
          Length = 513

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            +   L  L A+VI+     +     ++ R+  + L+  ++++ +IP +  L F +    
Sbjct: 19  TAEHLLISLLAIVIATFIGVLLGIFISEYRKYAVWLLGAVNVLYTIPSIALLGFFITITG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      L A+ A+    +  +  S Y  +  I   + E + +   +  Q  W + 
Sbjct: 79  VG--------NLTALIALILYALLPIIRSTYTGITQINPLIVEAAEAMGSTRRQLLWKIK 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +    L  
Sbjct: 131 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTLIG 183

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  +   +D LL +
Sbjct: 184 SVLIALLALGFDFLLAK 200



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               ++  + + L    +   ++ I+IA+ I + +GI+I      +  +     +L   P
Sbjct: 6   TLLREEAPFFLHLTAEHLLISLLAIVIATFIGVLLGIFISEYRKYAVWLLGAVNVLYTIP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +       ++     +L   + L L  +      I+ +   G +       E A +   T
Sbjct: 66  SIALLGFFITITGVGNLTALIALILYALL----PIIRSTYTGITQINPLIVEAAEAMGST 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    I LP   P  ++G         N   ++   +     +   GLG  I      
Sbjct: 122 RRQLLWKIKLPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITT 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +    ++G +++    L  +  L
Sbjct: 175 NNSAMTLIGSVLIALLALGFDFLL 198


>gi|150008007|ref|YP_001302750.1| putative ABC transporter [Parabacteroides distasonis ATCC 8503]
 gi|149936431|gb|ABR43128.1| putative ABC transporter [Parabacteroides distasonis ATCC 8503]
          Length = 452

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 83/236 (35%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+FR ++ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATIFRGILGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKRSNVLFQIIYPQLKPFLYSGLASAAG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    + PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFISFFFDK 234



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T  R 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATIFRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  ILGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKRSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASAAGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|167634844|ref|ZP_02393163.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
 gi|167641258|ref|ZP_02399511.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|170688982|ref|ZP_02880183.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|170707145|ref|ZP_02897601.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|177654543|ref|ZP_02936399.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|229600518|ref|YP_002864997.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
 gi|167510766|gb|EDR86159.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|167529918|gb|EDR92666.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
 gi|170127923|gb|EDS96794.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|170667083|gb|EDT17845.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|172080655|gb|EDT65738.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|229264926|gb|ACQ46563.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
          Length = 258

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 63  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 122 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 179 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 231

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 232 VTLCLYFI 239



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 17  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 77  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 136 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 189 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 239


>gi|192292232|ref|YP_001992837.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285981|gb|ACF02362.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 261

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 82/234 (35%), Gaps = 16/234 (6%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCIT------MFRVVVLIIIASI 399
                +  +A    W +   + +   T +D    IW G +T      M RV   I IA +
Sbjct: 24  LLLFGIWWLAARGGWVNKDLLPSPVDTLRDTAAAIWFGSMTKDFWHTMVRVAYSIAIAIV 83

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +PVGI +G +  +   ++       + PA   FPL +       L      +      
Sbjct: 84  AGVPVGIVLGAKAAVYRSVEFIVDFFRSTPATAMFPLFLLLFGLGDLAKIAVAAFAAWLV 143

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I+FNV  G           A S   +  R +R +I     P    G  TA   A  
Sbjct: 144 ----IVFNVAYGVMNARQTRILAARSMGASSLRIFRDVIFFETLPQTFIGLRTAVSLALV 199

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             IV+E+         T G+G  I ++    S  ++   +LI       LN  L
Sbjct: 200 VIIVAEMFIGA-----TDGMGHRIIDAQISYSLTDMYGSILIAGAMGYGLNLIL 248



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 96/274 (35%), Gaps = 20/274 (7%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDV 58
           +   +    + R+   I   +  +L+ GI  +   G          P D +      +  
Sbjct: 1   MQTAISKVSTARLRRAIELAVGPLLLFGIWWLAARGGWVNKDLLPSPVDTLRDTAAAIWF 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+ +    T +R+  ++ I+++       +      +   +  I+D  +S P       
Sbjct: 61  GSMTKDFWHTMVRVAYSIAIAIVAGVPVGIVLGAKAAVYRSVEFIVDFFRSTPATAMFPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F      K+  A  AA   I         F++   + N  +     +RS   S  +
Sbjct: 121 FLLLFGLGDLAKIAVAAFAAWLVI--------VFNVAYGVMNARQTRILAARSMGASSLR 172

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +    ++P     +  ++S     ++ +EM +         G+G  I  A     L
Sbjct: 173 IFRDVIFFETLPQTFIGLRTAVSLALVVIIVAEMFIGATD-----GMGHRIIDAQISYSL 227

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             +  ++L    + +  + +L    R ++ WS K
Sbjct: 228 TDMYGSILIAGAMGYGLNLILLFIERSIVHWSGK 261


>gi|237812161|ref|YP_002896612.1| permease [Burkholderia pseudomallei MSHR346]
 gi|237505663|gb|ACQ97981.1| permease [Burkholderia pseudomallei MSHR346]
          Length = 313

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWQRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|146343560|ref|YP_001208608.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146196366|emb|CAL80393.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 273

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 13/201 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++II + +G+ IG  P   +       +L+  P     P++      
Sbjct: 77  AASLQRLALGLGISAIIGLTLGLAIGLLPVAGAGFGTLVAVLSMIPPMAVLPVLFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L+I G    ++ ++       P +    A +   + W+    ++LP I 
Sbjct: 137 GELSK----VVLIIIGVTPTLVRDLSLEVQNMPREQLIKAQTLGGSTWQVAIRVVLPQIM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G A+   I +E  +         GLG  I       S   ++  V+ + 
Sbjct: 193 PRLIQGLRLMIGPAFLFLISAEAIA------SDVGLGYRIFLVRRYLSMDVILPYVVWIT 246

Query: 564 CFVLALNR-FLW--HPLYLYG 581
                 +   +W     + + 
Sbjct: 247 LLAYVFDYALVWFGQRAFPWA 267



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + +  R+   + IS +               G     ++ ++  IP +  L    
Sbjct: 72  LWSDTAASLQRLALGLGISAIIGLTLGLAIGLLPVAGAGFGTLVAVLSMIPPMAVLPVLF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   +   + N+PR+    +++   S WQ  
Sbjct: 132 IVFGLG--------ELSKVVLIIIGVTPTLVRDLSLEVQNMPREQLIKAQTLGGSTWQVA 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  MP L+  + + +   + F++++E I          G+G  I L  +   +  
Sbjct: 184 IRVVLPQIMPRLIQGLRLMIGPAFLFLISAEAIA------SDVGLGYRIFLVRRYLSMDV 237

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +++D  L
Sbjct: 238 ILPYVVWITLLAYVFDYAL 256


>gi|271963355|ref|YP_003337551.1| ABC transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506530|gb|ACZ84808.1| ABC-type transporter, permease protein [Streptosporangium roseum
           DSM 43021]
          Length = 262

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + +++  +I +P G  +G  P   + ++P  + L   P+      ++       
Sbjct: 65  TLGAWALGLLLTVMIAVPAGFVLGTLPRAETALRPVLEFLRPIPSLA----LIPLALALF 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+++   W +L N + G        KE   SF          + LP   P+
Sbjct: 121 SDRFDMKITLIVYAATWPVLMNTLYGLKDVDPLAKETLRSFGFGPLSVLWRVSLPSTAPF 180

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCC 564
             TG   A   A   +I  E+ + G     + G+G ++ E          ++   +    
Sbjct: 181 VATGVRLASAIALIVAISVELLAGG-----SDGIGVFLIEVGGSPDAMVYIIATAIWAGV 235

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
             L  +      L++   R +
Sbjct: 236 IGLVTD-----SLFVLAERRI 251



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 17/204 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T       ++++++       +     R    L P+L+ ++ IP L  +   +  F + +
Sbjct: 65  TLGAWALGLLLTVMIAVPAGFVLGTLPRAETALRPVLEFLRPIPSLALIPLALALFSDRF 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K        I  I  +  W +  +    L ++    +E  RSF        W + +P 
Sbjct: 125 DMK--------ITLIVYAATWPVLMNTLYGLKDVDPLAKETLRSFGFGPLSVLWRVSLPS 176

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + ++ +      ++ E++  G       GIG ++       D +  + A   
Sbjct: 177 TAPFVATGVRLASAIALIVAISVELLAGGSD-----GIGVFLIEVGGSPDAMVYIIATAI 231

Query: 248 MLGVIFLYDQLLF----RPMIVWS 267
             GVI L    LF    R +  W 
Sbjct: 232 WAGVIGLVTDSLFVLAERRIFRWH 255


>gi|30018633|ref|NP_830264.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus ATCC 14579]
 gi|29894174|gb|AAP07465.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus ATCC 14579]
          Length = 255

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 60  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      D  ++  +   T W+ ++ +  P + PY
Sbjct: 119 ---MLPKVMVVILVCFFPIALSILEGFQTVDKDMLKLLQTMKATKWQVYQKVKFPAVLPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 176 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 228

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 229 VTLCLYFI 236



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 14  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 74  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +D+ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 133 -------PIALSILEGFQTVDKDMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 186 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 236


>gi|241258731|ref|YP_002978615.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240863201|gb|ACS60864.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 272

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++I  + +G+ IG  P++ + + PF  +++  P     P++   +  
Sbjct: 76  GASLIRLFAGLGISTITALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILFIAMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ G    ++ ++   A   P +    A +   + W+    ++LP I 
Sbjct: 136 GEASK----IALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G AW   I +E  S        +GLG  I       S   +   V+ + 
Sbjct: 192 PRLITCLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDVIFPYVVWIT 245

Query: 564 CFVLALNRFL 573
              + +N  L
Sbjct: 246 LLAVIMNYIL 255



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+ + + IS +   V   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDTGASLIRLFAGLGISTITALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 131 IAMGLG--------EASKIALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLITCLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           I   ++ +  +  + + +L R  I 
Sbjct: 237 IFPYVVWITLLAVIMNYILDRIRIA 261


>gi|206974334|ref|ZP_03235251.1| putative ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217957974|ref|YP_002336518.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
 gi|222094174|ref|YP_002528231.1| ABC transporter , permease protein, putative [Bacillus cereus Q1]
 gi|206747574|gb|EDZ58964.1| putative ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217065760|gb|ACJ80010.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
 gi|221238229|gb|ACM10939.1| ABC transporter, permease protein, putative [Bacillus cereus Q1]
          Length = 257

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ +  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSVFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 76  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 135 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|326803524|ref|YP_004321342.1| choline transport system permease protein opuBB [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650950|gb|AEA01133.1| choline transport system permease protein opuBB [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 213

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ + ++         ++ ++     + ++ I+Q+IP +  L   + +F         
Sbjct: 24  LISLALGIIVAIPLGVFLSQHQKYAGGFISLVSILQTIPTMALLALMIPFFGVGRTP--- 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                +I A+F   +  +  + Y  + ++  DL +  +   L+ WQ  W + +P + P +
Sbjct: 81  -----SIIALFLYSLLPILRNTYLGMTSVSADLLDAGKGMGLTSWQLIWKVQLPLATPVI 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S      +   +  I  G       G+G  I   +       I    + +  + 
Sbjct: 136 MAGVRLSAVYVIAWTTLAAYIGGG-------GLGEMIFNGLNLFRADLIFGGTIPVTILA 188

Query: 253 FLYDQLLFR 261
            + D ++ +
Sbjct: 189 LVVDFIMGK 197



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 64/201 (31%), Gaps = 11/201 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F  Q+   ++ L    +   ++ + +  I+ IP+G+++      +        +L   P
Sbjct: 3   EFLQQEGDEILRLLGQHISISLISLALGIIVAIPLGVFLSQHQKYAGGFISLVSILQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 L++               + +   +   IL N   G ++   D  +      +T
Sbjct: 63  TMALLALMIPFFGVGRT----PSIIALFLYSLLPILRNTYLGMTSVSADLLDAGKGMGLT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+    + LP   P  + G   +       + ++     G       GLG  I      
Sbjct: 119 SWQLIWKVQLPLATPVIMAGVRLSAVYVIAWTTLAAYIGGG-------GLGEMIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
                +  G + +    L ++
Sbjct: 172 FRADLIFGGTIPVTILALVVD 192


>gi|207725141|ref|YP_002255538.1| abc type transporter : periplasmic glycine betaine /
           choline-binding lipoprotein and permease components
           [Ralstonia solanacearum MolK2]
 gi|206590373|emb|CAQ37334.1| abc type transporter : periplasmic glycine betaine /
           choline-binding lipoprotein and permease components
           [Ralstonia solanacearum MolK2]
          Length = 520

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 17/239 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTFVYA 87
              +         T   R    +   +  +   L +   R    + ++   ++L      
Sbjct: 287 FARVASQFLAGHGTPPARADAPVHAFSARLTDGLWRLTRRHLALVAASTGAAVLIGVPLG 346

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LAA+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +
Sbjct: 347 LLAAR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------VVPALIALTLYAL 398

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  +    L  +P  L + + +  L+  Q+   + +P ++P ++  +  +   G    
Sbjct: 399 LPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVILAGIKTAAVIGVGTA 458

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +  I  G       G G  IA  +   D  A L A      V+ L  Q  F     W
Sbjct: 459 TIAAFIGAG-------GYGERIATGLALND-SATLLAGAIPAAVLALLVQGAFEAAERW 509



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V      A +I +P+G+    R  I   +     +L   P+     +++  V    +
Sbjct: 328 LALVAASTGAAVLIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGV 386

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +  +T  +  R + LP   P  
Sbjct: 387 VPAL---IALTLYALLPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVI 443

Query: 507 VTGAIT-ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  T A  G   A+I + + + G+     TGL    + +   G+ P  VL +L+   F
Sbjct: 444 LAGIKTAAVIGVGTATIAAFIGAGGYGERIATGLALNDSATLLAGAIPAAVLALLVQGAF 503


>gi|330981471|gb|EGH79574.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 98/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P    R I     F LL F   +G    L     +  +P      D V  +  
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPSDKLLPSAVQMADAVKRMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
             D  S    L Q ++ +  R+     IS L        A      G  L P+L ++  +
Sbjct: 61  VADPRSGDYLLWQDSASSLQRLAIGFGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVILPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWSL 255



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ +   I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLQRLAIGFGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     +ILP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|288919826|ref|ZP_06414150.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288348741|gb|EFC82994.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 258

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 17/258 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  P    +LA +    +   +    +      D V    I     +L      T   +
Sbjct: 9   RQYGPAGVIVLAVLGAWKLATSVFGVEEYILPAPDEVITTLIDRWDRTLSSATWVTLKEV 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +    I++    + A     S      + P+L   Q+IP++       + F      K+I
Sbjct: 69  VVGFAIAVAAGLLIACALHFSAIARRAIYPLLIGSQTIPVVVIAPILAIIFGYSITPKLI 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +       L  +   L  + R+   + W  F  +  P ++P +
Sbjct: 129 LVALLCFF--------PIVVGTLDGLAAVDPQLTRMMRTLYGNRWSIFLRVEFPSALPSM 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTML 249
              + +S +      V       G+      G+G  +  A+ +     +  A+     M 
Sbjct: 181 FTGLRLSAAYAATAAV------FGEYSGSTDGLGHVMRQAVPQLQSSLVFAAITLLTAMS 234

Query: 250 GVIFLYDQLLFRPMIVWS 267
             +F+   LL   ++ W+
Sbjct: 235 VALFVLVTLLENVLVPWA 252



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  VVV   IA    + +   + F       I P        P  V  P++     Y 
Sbjct: 63  VTLKEVVVGFAIAVAAGLLIACALHFSAIARRAIYPLLIGSQTIPVVVIAPILAIIFGYS 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + ++LL      + I+   + G +A       +  + +   W  +  +  P   P
Sbjct: 123 ITPKLILVALL----CFFPIVVGTLDGLAAVDPQLTRMMRTLYGNRWSIFLRVEFPSALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   +   A  A++  E          T GLG  + ++  +     V   + ++  
Sbjct: 179 SMFTGLRLSAAYAATAAVFGEY------SGSTDGLGHVMRQAVPQLQSSLVFAAITLLTA 232

Query: 565 FVLALNRFL 573
             +AL   +
Sbjct: 233 MSVALFVLV 241


>gi|229815942|ref|ZP_04446265.1| hypothetical protein COLINT_02997 [Collinsella intestinalis DSM
           13280]
 gi|229808495|gb|EEP44274.1| hypothetical protein COLINT_02997 [Collinsella intestinalis DSM
           13280]
          Length = 250

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     ++    + +     +     + +     +     P   L    P    
Sbjct: 43  GDWPLLVGHAATSLAEAGLGLAAGVALGFIAALAMDRFDLLYRAFYPIVVLTQTIPTVAI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V    Y      L   +L++  T + I   ++ G  +   D  ++  +   T  + 
Sbjct: 103 APLLVLWFGYG----MLPKVVLIVVATFFPITVGMLEGLRSIDPDEIDLMRAMGATRLQI 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R++ LP   P + +G   +   A   ++++E           +GLG Y+    +  SF 
Sbjct: 159 LRHVKLPAAMPQFFSGLKISAAYAIVGAVIAEWLGG------FSGLGVYMTRVRKAYSFD 212

Query: 554 EVVLGVLIMCCFVLAL 569
           ++   + ++    L L
Sbjct: 213 KMFAVIFLISGLSLVL 228



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 18/256 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA + +  +             P  I     +  D   L  +A+ +       +   + 
Sbjct: 10  ILALLAIWQLACSAGLVPPFML-PSPIRVGQALAGDWPLLVGHAATSLAEAGLGLAAGVA 68

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A    +   L     PI+ + Q+IP +      V++F            L  +  
Sbjct: 69  LGFIAALAMDRFDLLYRAFYPIVVLTQTIPTVAIAPLLVLWFGYGM--------LPKVVL 120

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +T  M + L +I  D  ++ R+   +  Q   ++ +P +MP     + +S +
Sbjct: 121 IVVATFFPITVGMLEGLRSIDPDEIDLMRAMGATRLQILRHVKLPAAMPQFFSGLKISAA 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 V +E +          G+G Y+     A     + A+++ +  +  V+      
Sbjct: 181 YAIVGAVIAEWLGG------FSGLGVYMTRVRKAYSFDKMFAVIFLISGLSLVLMWAVDA 234

Query: 259 LFRPMIVWSNKFRLER 274
           + R  + W  +   ER
Sbjct: 235 VRRIAMPWERRSDSER 250


>gi|326773331|ref|ZP_08232614.1| ABC transporter, taurine uptake transporter (TauT) family, permease
           protein [Actinomyces viscosus C505]
 gi|326636561|gb|EGE37464.1| ABC transporter, taurine uptake transporter (TauT) family, permease
           protein [Actinomyces viscosus C505]
          Length = 262

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 75/218 (34%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +++ + + L    L  YA  T    L   +++ +F    A      R     ++
Sbjct: 40  LPSPLAVINRMWLGLTQAGLGSYAGVTLKEALLGCLLAAVFALPLAWALHHWRFFSRAVL 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +      V++             L  +        + +T ++   L  +
Sbjct: 100 PYVAASQAVPGIALAPLLVLWIGYG--------TLPVVILCAFMVFFPITITVLLGLRGL 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D+ + +R     G     ++ +P ++P +   +    +      V  EMI+ GD    
Sbjct: 152 DTDVIDAARLDGAHGLSMLVHMELPMTLPAIYTGLRTGFTLSITGAVVGEMIMGGD---- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  ++    + D   +   +  +  +       L
Sbjct: 208 --GLGMLLSTQRDKVDTTGMFSTITLLCLLATTIHWAL 243



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 85/237 (35%), Gaps = 25/237 (10%)

Query: 348 WFCVVCGVAIGIAWQSIGY-----IVNHFTYQDVLYVIWLGC----------ITMFRVVV 392
           W   + G  + +AWQ+         +   +   V+  +WLG           +T+   ++
Sbjct: 13  WPAFLLGATLLVAWQAAATSGAVPAIFLPSPLAVINRMWLGLTQAGLGSYAGVTLKEALL 72

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++A++  +P+   +      S  + P+     A P     PL+V  + Y  L   +  
Sbjct: 73  GCLLAAVFALPLAWALHHWRFFSRAVLPYVAASQAVPGIALAPLLVLWIGYGTLPVVILC 132

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + ++ F     I   V+ G      D  + A      G     ++ LP   P   TG  T
Sbjct: 133 AFMVFF----PITITVLLGLRGLDTDVIDAARLDGAHGLSMLVHMELPMTLPAIYTGLRT 188

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               +   ++V E+   G       GLG  ++   +K     +   + ++C     +
Sbjct: 189 GFTLSITGAVVGEMIMGGD------GLGMLLSTQRDKVDTTGMFSTITLLCLLATTI 239


>gi|126441809|ref|YP_001058904.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126221302|gb|ABN84808.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
          Length = 323

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 116 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 175

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 176 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 227

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 228 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 285

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 286 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 316



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 52  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 111

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 112 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 168

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 169 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 224

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 225 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 283 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 317


>gi|42779571|ref|NP_976818.1| ABC transporter, permease protein, putative [Bacillus cereus ATCC
           10987]
 gi|42735487|gb|AAS39426.1| ABC transporter, permease protein, putative [Bacillus cereus ATCC
           10987]
 gi|324324477|gb|ADY19737.1| ABC transporter permease [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 257

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 76  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 135 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|327478688|gb|AEA81998.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas stutzeri DSM 4166]
          Length = 263

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 93/235 (39%), Gaps = 14/235 (5%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
           +G      P +    +   +D  +       T+ R L    +S+    V    A  S   
Sbjct: 39  YGALVLPAPLETFSRLLQLIDEGAAWPELLATSRRGLLGFALSVAVGSVLGLAAGVSMTA 98

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
            M+  P++ ++  +P + +L   +++F       V    +A+   +F   +        Q
Sbjct: 99  SMMARPLVTVLMGMPPIAWLVLAMLWFGASDGTPVFTVFIASFPLVFVGAL--------Q 150

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
               +   L++++ +FRL        + +P  +  L    + +++  W  VV +E++   
Sbjct: 151 GTRTLDNQLKDMALAFRLPRRMLLLDVYLPHVVSYLFPAWITALAMAWKIVVMAELLA-- 208

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                  G+G+ +A++    D  A +  +  ++G++   + LL  P+     ++R
Sbjct: 209 ----TQDGVGAALAVSRSHLDTSATMAWITAVVGLLLAVEYLLLEPIKREVERWR 259



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 70/243 (28%), Gaps = 10/243 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           L       P             ++L   W  V       +    +          D    
Sbjct: 4   LRSWLTSLPGYLWSGWGALASLFLLLAAWEAVASHYGALVLPAPLETFSRLLQLIDEGAA 63

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T  R ++   ++  +   +G+  G     S   +P   +L   P   +  L + 
Sbjct: 64  WPELLATSRRGLLGFALSVAVGSVLGLAAGVSMTASMMARPLVTVLMGMPPIAWLVLAML 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                   P       +   +   +    + G     N  K++A +F +        + L
Sbjct: 124 WFGASDGTP----VFTVFIASFPLVFVGALQGTRTLDNQLKDMALAFRLPRRMLLLDVYL 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P +  Y     ITA   AW   +++E+ +         G+GA +A S         +  +
Sbjct: 180 PHVVSYLFPAWITALAMAWKIVVMAELLA------TQDGVGAALAVSRSHLDTSATMAWI 233

Query: 560 LIM 562
             +
Sbjct: 234 TAV 236


>gi|86750212|ref|YP_486708.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86573240|gb|ABD07797.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 261

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+F ++   ++  +  + VG  I   P +   I P+   L   P     PL +    Y 
Sbjct: 63  ATLFEILSGFVLGVLAGLVVGALISLIPVLERLIYPYLVALQTLPKVAIAPLFIIWFGYG 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  +L+      + +L +VIAG  +   D  ++  +F  T W+    + +P    
Sbjct: 123 LTSKVVITALV----CFFPVLVSVIAGFHSTDKDQLDMMKAFGATKWQTLVRLRIPSALV 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A   A   +IV E            GLG  +           V   ++++  
Sbjct: 179 LIFAGLEIAAVLAVIGAIVGEFVG------AQVGLGYLVVTLNFSLDVAGVFAVLIVLSA 232

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
             LA+     H +  Y  R  
Sbjct: 233 IGLAM-----HAITRYAARRY 248



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 14/222 (6%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +          P  I   +   +   ++  +   T   +LS  V+ +L   V   L +  
Sbjct: 30  LFGISQLVLPPPSAIAVRLQSLVFGGTIWPHLWATLFEILSGFVLGVLAGLVVGALISLI 89

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L  ++ P L  +Q++P +      +++F      KV+   L   F         +  S
Sbjct: 90  PVLERLIYPYLVALQTLPKVAIAPLFIIWFGYGLTSKVVITALVCFF--------PVLVS 141

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +     +  +D  ++ ++F  + WQ    L +P ++  +   + ++       V+A    
Sbjct: 142 VIAGFHSTDKDQLDMMKAFGATKWQTLVRLRIPSALVLIFAGLEIA------AVLAVIGA 195

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +VG+ V    G+G  +       D+  +   ++ +  +    
Sbjct: 196 IVGEFVGAQVGLGYLVVTLNFSLDVAGVFAVLIVLSAIGLAM 237


>gi|302188278|ref|ZP_07264951.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P    R I     F LL F   +G    L     +  +P      D V  +  
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPSDKLLPSAVQMADAVKRMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
             D  S    L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  VADPRSGDYLLWQDSASSLQRLAIGLGISALLGLCLGIAAGIMPLCGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVILPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLQRLAIGLGISALLGLCLGIAAGIMPLCGAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     +ILP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|302385389|ref|YP_003821211.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302196017|gb|ADL03588.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 252

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 76/244 (31%), Gaps = 10/244 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              ++      +      L I W  +     +          V      +   +   G I
Sbjct: 3   RKSQSITSRLWSWSAVLGLLILWQGITAFGLVDRFLLPSPISVGKAFVTEFPILACHGGI 62

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    + + +       + + +     +     P   L    P     PL+V    Y  
Sbjct: 63  TLLEAFLGLFLGVATGFVIAVVMDHFNGLYRAFYPLIVLTQTVPTVAIAPLLVLWFGYG- 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +L+I  T + I   ++ G  +   D   +  S      + +RYI LPG    
Sbjct: 122 ---MVPKVILIILTTFFPITVGLLTGFKSVNPDAVNLLRSMGAGKMKIFRYIKLPGAMGQ 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      +   A   +++SE            GLG Y+    +  +F ++   + ++   
Sbjct: 179 FFASLRISVSYAVVGAVISEWLGGFG------GLGVYMTRVKKSFAFDKMFAVIFLISAV 232

Query: 566 VLAL 569
            L L
Sbjct: 233 SLLL 236



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 18/250 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +++   I      +    +P  I        +   L  +   T L     + + + 
Sbjct: 18  VLGLLILWQGITAFGL-VDRFLLPSPISVGKAFVTEFPILACHGGITLLEAFLGLFLGVA 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A +      L     P++ + Q++P +      V++F            +  +  
Sbjct: 77  TGFVIAVVMDHFNGLYRAFYPLIVLTQTVPTVAIAPLLVLWFGYGM--------VPKVIL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +  + +T  +     ++  D   + RS      + F Y+ +P +M     ++ +S+S
Sbjct: 129 IILTTFFPITVGLLTGFKSVNPDAVNLLRSMGAGKMKIFRYIKLPGAMGQFFASLRISVS 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                 V SE +          G+G Y+    K      +   +  +  V  L      L
Sbjct: 189 YAVVGAVISEWLGG------FGGLGVYMTRVKKSFAFDKMFAVIFLISAVSLLLMKGVDL 242

Query: 259 LFRPMIVWSN 268
           L R  + W  
Sbjct: 243 LSRKCMPWEE 252


>gi|78063457|ref|YP_373365.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. 383]
 gi|77971342|gb|ABB12721.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia sp. 383]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AFV +  + +       +  VP D +   +   LD   L      T  R+     I   
Sbjct: 33  VAFVALWWLASAQRWFPPQLLVPPDRLAATLRTLLDTGELRDNLLITLHRLALGFAIGAT 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L A+SR     L P  D+++ +P L  +   ++      P K++    A  F 
Sbjct: 93  GGAAFGILLARSRLFADYLRPTFDLLRQVPTLTLIPLLILLIGVDEPLKLVVVGKAVFF- 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + Y  + + PRDL E++R + L  +     + +P ++P L+  + ++++
Sbjct: 152 -------PVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDVLLPAALPPLLTGVRIALA 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  +VA E++          GIG  + LA +   L  +L  +  +  + F  D+   L
Sbjct: 205 RAWLALVAVELLSADS------GIGQMMELARQMLRLDVVLIDVAVIGLIGFAIDRSIAL 258

Query: 259 LFRPMIVWS 267
           + R  + W 
Sbjct: 259 VQRYALRWQ 267



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 21/253 (8%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------ 383
             L+L    R+  +   +   V       +A     +        D L            
Sbjct: 12  RALRLPGMARLGGLALWWATPVAFVALWWLASAQRWFPPQLLVPPDRLAATLRTLLDTGE 71

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                 IT+ R+ +   I +      GI +      +  ++P   LL   P       ++
Sbjct: 72  LRDNLLITLHRLALGFAIGATGGAAFGILLARSRLFADYLRPTFDLLRQVPTLT----LI 127

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +            +++     + +      G    P D  E+A  + +  +   R ++
Sbjct: 128 PLLILLIGVDEPLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDVL 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  +TG   A   AW A +  E+ S        +G+G  +  + +      V++ 
Sbjct: 188 LPAALPPLLTGVRIALARAWLALVAVELLS------ADSGIGQMMELARQMLRLDVVLID 241

Query: 559 VLIMCCFVLALNR 571
           V ++     A++R
Sbjct: 242 VAVIGLIGFAIDR 254


>gi|323466568|gb|ADX70255.1| Glycine betaine/choline ABC transporter permease component
           [Lactobacillus helveticus H10]
          Length = 226

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 5/184 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F     ++IA+II  P+G        I++  + FAQ+L   P+     +++  +     
Sbjct: 36  LFLSFTSLLIAAIIAFPLGYLGSKNKVIAAFCESFAQILRIIPSLALLFILIPFIGTGVA 95

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L        ++ N + G +  P D +EV  S  +T     + I LP   PY 
Sbjct: 96  PALIALVVL----ALPPLVVNTVLGFNEVPKDLEEVGLSLGMTNMDLLKQISLPLALPYI 151

Query: 507 VTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A      +AS+ + + + G   L  TGLG Y  +    G     +L +L M  F
Sbjct: 152 LNGIKLALVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVVIGGVSVALLSLLAMIIF 211

Query: 566 VLAL 569
            L +
Sbjct: 212 DLII 215



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 75/192 (39%), Gaps = 15/192 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q   +      ++++I+ +  F    L +K++ +         I++ IP L  L   + +
Sbjct: 30  QDVGQHLFLSFTSLLIAAIIAFPLGYLGSKNKVIAAFCESFAQILRIIPSLALLFILIPF 89

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          A+ A+    +  +  +       +P+DLEEV  S  ++       
Sbjct: 90  IGTGV--------APALIALVVLALPPLVVNTVLGFNEVPKDLEEVGLSLGMTNMDLLKQ 141

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  + +++      V+AS  +    T I   G+G  I   +    +  ++
Sbjct: 142 ISLPLALPYILNGIKLAL----VEVIASASLA---TYIGAGGLGQLIMTGLGLYKMQYVV 194

Query: 243 YAMLTMLGVIFL 254
              +++  +  L
Sbjct: 195 IGGVSVALLSLL 206


>gi|301052095|ref|YP_003790306.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374264|gb|ADK03168.1| ABC transporter, permease [Bacillus cereus biovar anthracis str.
           CI]
          Length = 255

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 60  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 119 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 176 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 228

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 229 VTLCLYFI 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 14  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 74  IGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 133 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 186 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 236


>gi|239628147|ref|ZP_04671178.1| transport protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518293|gb|EEQ58159.1| transport protein [Clostridiales bacterium 1_7_47FAA]
          Length = 251

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  ++ +  + A I+ I +G      P +   ++P   L+ + P   F  L +  +    
Sbjct: 65  SFAKISIGFLGAFILSILLGCLAYAVPLVKDLLEPMMMLIKSVPVASFVILALIWIG--S 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N  ++ S L++      I  + ++G         E+A  F +   +  RYI +P + PY
Sbjct: 123 HNLAVFTSFLVVVPM---IYVSTLSGLEHTDRKLLEMAMVFRMPLLKQVRYIYIPAVLPY 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G  TA G +W + + +EV            +G  +  S        +     ++   
Sbjct: 180 LISGCRTALGMSWKSGVAAEVIGIPEGS-----IGEQLYYSKLYLDTAGLFAWTFVIIIA 234

Query: 566 VLALNRFL 573
                R  
Sbjct: 235 SAVFERLF 242



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 87/202 (43%), Gaps = 9/202 (4%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F  L ++ V    N+L+H       P D+V  +   +   S       +  ++    + +
Sbjct: 17  FIWLFWIAVWQAANMLIHNNIIFVGPVDMVKALLELVRDSSFWASVFNSFAKISIGFLGA 76

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            + + +   LA     +  +L P++ +++S+P+  F+   +++         IG+   A+
Sbjct: 77  FILSILLGCLAYAVPLVKDLLEPMMMLIKSVPVASFVILALIW---------IGSHNLAV 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F  F   V  +  S    L +  R L E++  FR+   ++  Y+ +P  +P L+     +
Sbjct: 128 FTSFLVVVPMIYVSTLSGLEHTDRKLLEMAMVFRMPLLKQVRYIYIPAVLPYLISGCRTA 187

Query: 200 MSGGWFFVVASEMIVVGDTVIP 221
           +   W   VA+E+I + +  I 
Sbjct: 188 LGMSWKSGVAAEVIGIPEGSIG 209


>gi|146342318|ref|YP_001207366.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195124|emb|CAL79149.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 245

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +   L G  +   P  ++ +        +L  +   T  R+  A  +S+           
Sbjct: 16  VAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAFTLSMAIGSALGYWMG 75

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +  P L ++ ++P L  +    ++            E+AAI AI  +++    
Sbjct: 76  RSRLANRLGDPWLILLLNLPALVVIVLAYIWAGL--------TEVAAIAAIAINKLPTAV 127

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++ +    +   L+E+++ F L   +   ++ +P   P +       +S  W  V+ +E
Sbjct: 128 VTLREGARALDPSLDEMAKVFALPRSRILRHVLLPQLAPYIAAAARSGLSLVWKIVLVAE 187

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           ++          GIG  I +A +  D+  +L   L+   V+ + + L  +P    ++++R
Sbjct: 188 LLG------RPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRWR 241

Query: 272 L 272
           L
Sbjct: 242 L 242



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 10/236 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W+                 +           +      T+ RV +   ++  I   +G W
Sbjct: 14  WWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAFTLSMAIGSALGYW 73

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G     +    P+  LL   PA V   L         +     +++  +       +  
Sbjct: 74  MGRSRLANRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAINKLPTA----VVT 129

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  GA A      E+A  F +   R  R+++LP + PY    A +     W   +V+E+ 
Sbjct: 130 LREGARALDPSLDEMAKVFALPRSRILRHVLLPQLAPYIAAAARSGLSLVWKIVLVAELL 189

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                  R  G+G  I  + +    P ++   L     VL +      P     +R
Sbjct: 190 G------RPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASR 239


>gi|50084640|ref|YP_046150.1| ABC transporter permease [Acinetobacter sp. ADP1]
 gi|49530616|emb|CAG68328.1| putative permease protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 264

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 84/245 (34%), Gaps = 6/245 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             F ++ +   +   L + W   +  + + +        + H        +     +T+ 
Sbjct: 9   PKFRRVAAPLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHALVSQSGLLFGSLWVTLK 68

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++  I A +I   +         I +   P+A L    P     PLV+  +     N 
Sbjct: 69  VTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQ----NT 124

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L L +  +    + IL N   G  +       +      + W+    + +P   PY+  
Sbjct: 125 TLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFG 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G A   ++VSE  +       + GL   I ++  +   P +   + ++ C  L 
Sbjct: 185 GLRISSGLALIGAVVSEFVAG--TGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLV 242

Query: 569 LNRFL 573
           L   +
Sbjct: 243 LFILM 247



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 17/249 (6%)

Query: 18  NIFDLLAFVLVIGIINILLH--GIQETTVPR----DIVDIVPITLDVHSLPQYASRTTLR 71
             F  +A  L +G+  +L+    +Q+  VP        DI    +    L   +   TL+
Sbjct: 9   PKFRRVAAPLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHALVSQSGLLFGSLWVTLK 68

Query: 72  M-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           + L A + +++   + A L  +SR +    +P   + Q  PI+      +++  N     
Sbjct: 69  VTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLAL 128

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+ A L AIF I T        +    L ++   L  + +  + S WQ    L VP ++P
Sbjct: 129 VVCAMLVAIFPILT--------NTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALP 180

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                + +S        V SE +          G+   I  A  + DL  +  A+  +  
Sbjct: 181 YFFGGLRISSGLALIGAVVSEFVAGTGGTSA--GLAYQILQAGFQLDLPLMFAALFLITC 238

Query: 251 VIFLYDQLL 259
              +   L+
Sbjct: 239 TGLVLFILM 247


>gi|253573772|ref|ZP_04851115.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847300|gb|EES75305.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 279

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 92/246 (37%), Gaps = 12/246 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV--NHFTYQDVLYVIWLGCITM 387
               +   + V +++ I  + ++ G A    W S   ++            + +   IT+
Sbjct: 33  RSTTVWIGRLVVFIVIIGLWELLSGTAFNSFWLSKPSLIIKRIIDMTASGDLWFHMSITL 92

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +V +II  +    +GI + F       + P+   L + P     PL +        +
Sbjct: 93  QESIVGLIIGMLGGTLLGILLAFSGIFQKWVYPYIMALYSLPRVSLAPLFIVWFGIGMTS 152

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L +  ++IF   +    N   G      D  ++ S+F        R+++LP I  + +
Sbjct: 153 KILMVVAMVIFVAFY----NAYEGVRNIDKDLMDMMSTFKAKWTHKLRWVVLPSITVWIL 208

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           T      G A   S+++E+           GLG YI  S+       +  G++++    +
Sbjct: 209 TSLRLNIGMALIGSVIAELVG------SNRGLGYYITYSSNMLDTTGIFTGLVLIMIIAV 262

Query: 568 ALNRFL 573
            L + +
Sbjct: 263 VLEQII 268



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 92/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  +++         + P  I+  +        L  + S T    +  ++I +L
Sbjct: 45  FIVIIGLWELLSGTAFNSFWLSKPSLIIKRIIDMTASGDLWFHMSITLQESIVGLIIGML 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L A S      + P +  + S+P +      +V+F      K++      IF 
Sbjct: 105 GGTLLGILLAFSGIFQKWVYPYIMALYSLPRVSLAPLFIVWFGIGMTSKILMVVAMVIFV 164

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F         + Y+ + NI +DL ++  +F+     K  ++ +P     ++ ++ +++ 
Sbjct: 165 AFY--------NAYEGVRNIDKDLMDMMSTFKAKWTHKLRWVVLPSITVWILTSLRLNIG 216

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V +E++          G+G YI  +    D   I   ++ ++ +  + +Q++
Sbjct: 217 MALIGSVIAELVGSN------RGLGYYITYSSNMLDTTGIFTGLVLIMIIAVVLEQII 268


>gi|148252327|ref|YP_001236912.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146404500|gb|ABQ33006.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 273

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I+++I + +G+ IG  P   +       +L+  P     P++      
Sbjct: 77  AASLQRLALGLGISAVIGLVLGLAIGLLPIAGAGFGTLVAVLSMIPPMAVLPVLFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L+I G    ++ ++       P +    A +   + W+    ++LP I 
Sbjct: 137 GELSK----VVLIIIGVTPTLVRDLSLEVQNMPREQLIKAQTLGASTWQVAIRVVLPQIM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G     G A+   I +E  +         GLG  I       S   ++  V+ + 
Sbjct: 193 PRLIQGLRLMIGPAFLFLISAEAIA------SDVGLGYRIFLVRRYLSMDVILPYVVWIT 246

Query: 564 CFVLALNR-FLW 574
                 +   +W
Sbjct: 247 LLAYIFDYALIW 258



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + +  R+   + IS +   V           G     ++ ++  IP +  L    
Sbjct: 72  LWSDTAASLQRLALGLGISAVIGLVLGLAIGLLPIAGAGFGTLVAVLSMIPPMAVLPVLF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   +   + N+PR+    +++   S WQ  
Sbjct: 132 IVFGLG--------ELSKVVLIIIGVTPTLVRDLSLEVQNMPREQLIKAQTLGASTWQVA 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  MP L+  + + +   + F++++E I          G+G  I L  +   +  
Sbjct: 184 IRVVLPQIMPRLIQGLRLMIGPAFLFLISAEAIA------SDVGLGYRIFLVRRYLSMDV 237

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +++D  L
Sbjct: 238 ILPYVVWITLLAYIFDYAL 256


>gi|327480625|gb|AEA83935.1| ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 15/228 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL    + +   + +   P       L  Q  + +  R+ S + I+ +        A   
Sbjct: 44  LLPSFGQMSAAVERLAFTPDKRSGDYLFWQDTASSLKRLGSGLAIAAVAGLCLGVAAGTL 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
              G  L P+L ++  +P L  L    + F           EL+ +  I       +   
Sbjct: 104 PLFGAPLSPLLTVLSMVPPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IPR+L   +++   + W     L +P  +P L+ ++ + +   W F++A+E I
Sbjct: 156 LEQRAREIPRELLIKAQTLGANTWTLILRLVLPQLLPRLLISLRLVLGSAWLFLIAAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              D      G+G  I L  +   +  IL  +  +  + +  D  L R
Sbjct: 216 ASTD------GLGYRIFLVRRYMAMDVILPYVAWITLLAWAMDFSLRR 257



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + IA++  + +G+  G  P   + + P   +L+  P     P++      
Sbjct: 76  ASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +     W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILRLVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V  + 
Sbjct: 192 PRLLISLRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYMAMDVILPYVAWIT 245

Query: 564 CFVLALNRFLWHPLYLY 580
               A++ F    L   
Sbjct: 246 LLAWAMD-FSLRRLTQL 261


>gi|317057977|gb|ADU90694.1| putative integral membrane subunit [Collimonas sp. MPS11E8]
          Length = 404

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q   R    +L +++ +++       L+ +S+RL  +L P+L+++Q+IP +      +  
Sbjct: 197 QALLRHLQLVLFSVLPAVVIGSSLGVLSFRSQRLSRLLFPLLNVIQTIPSIALFGLLIGP 256

Query: 123 FMNLYPGKVIGAE-----LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              L                A+ A+    +  MT S    L  +P  + E +R   +S W
Sbjct: 257 LTLLGLLLPRTGISGVGMAPALLALMLYSLLPMTRSAVAGLEQVPASVREAARGIGMSAW 316

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F+ + +P ++P  +  + ++       V  + +I  G       G G+ +   +    
Sbjct: 317 QIFFRVELPLALPVFLNGVRVTTVQAVGLVEVAALIGAG-------GFGTLMFQGMASSA 369

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
           L  +L  ++ ++ +  + D 
Sbjct: 370 LDLVLLGVIPVVLLAIVVDT 389



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 16/193 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+  ++ A +I   +G+       +S  + P   ++   P+   F L++  ++   L
Sbjct: 203 LQLVLFSVLPAVVIGSSLGVLSFRSQRLSRLLFPLLNVIQTIPSIALFGLLIGPLTLLGL 262

Query: 447 NPNLWLSLLMIFGTQW---------YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                    +                +  + +AG    P   +E A    ++ W+ +  +
Sbjct: 263 LLPRTGISGVGMAPALLALMLYSLLPMTRSAVAGLEQVPASVREAARGIGMSAWQIFFRV 322

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P ++ G       A     V+ +   G       G G  + +     +   V+L
Sbjct: 323 ELPLALPVFLNGVRVTTVQAVGLVEVAALIGAG-------GFGTLMFQGMASSALDLVLL 375

Query: 558 GVLIMCCFVLALN 570
           GV+ +    + ++
Sbjct: 376 GVIPVVLLAIVVD 388


>gi|217077210|ref|YP_002334928.1| W family [Thermosipho africanus TCF52B]
 gi|217037065|gb|ACJ75587.1| W family [Thermosipho africanus TCF52B]
          Length = 243

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 98/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ L+ F+L+  I +I++        P  +  +    +   +L      T L+ + A+  
Sbjct: 4   LYGLILFILIWWIFSIIIDSQLILPTPISVGRVFIDLVQTKTLWSSLLSTVLKGIIALAF 63

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++  F +  L      L  +  P   I QS+P++ +L   +  +   + G         
Sbjct: 64  TIILGFFFGFLMGIFDVLYELFRPAFTIFQSVPVISWLVLVIFVWGIGFKGP-------- 115

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I     S + N TF++ Q + N  + L E++  +++   +    + +   +P L   + +
Sbjct: 116 IVITVLSLLPNTTFAIAQGVKNTDKKLIEMAYVYKVPKKRIVKDIYIGSVIPFLFTALEV 175

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                W  ++ SE +   +      GIG  IA A +  ++  +    +  + +    ++L
Sbjct: 176 ISGNIWKVIIVSEYLAGNE------GIGVQIAWARQYVNVPKVYALTIFAILLGISSERL 229

Query: 259 L 259
           +
Sbjct: 230 I 230



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + I+W   +   +  I    I              +      T+ + ++ +    I+  
Sbjct: 10  FILIWWIFSIIIDSQLILPTPISVGRVFIDLVQTKTLWSSLLSTVLKGIIALAFTIILGF 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             G  +G    +    +P   +  + P   +  LV+         P +   L ++  T +
Sbjct: 70  FFGFLMGIFDVLYELFRPAFTIFQSVPVISWLVLVIFVWGIGFKGPIVITVLSLLPNTTF 129

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I      G         E+A  + +   R  + I +  + P+  T      G  W   I
Sbjct: 130 AI----AQGVKNTDKKLIEMAYVYKVPKKRIVKDIYIGSVIPFLFTALEVISGNIWKVII 185

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE  +         G+G  IA + +  + P+V    +      ++  R +
Sbjct: 186 VSEYLAG------NEGIGVQIAWARQYVNVPKVYALTIFAILLGISSERLI 230


>gi|301309906|ref|ZP_07215845.1| putative ABC transporter, ATP-binding protein [Bacteroides sp.
           20_3]
 gi|300831480|gb|EFK62111.1| putative ABC transporter, ATP-binding protein [Bacteroides sp.
           20_3]
          Length = 452

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+ R ++ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRGILGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKRSNVLFQIIYPQLKPFLYSGLASAAG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    + PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFISFFFDK 234



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T LR 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  ILGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKRSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASAAGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|126730659|ref|ZP_01746469.1| Binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126708825|gb|EBA07881.1| Binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 269

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 95/248 (38%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   ++      +    ++E  +P     +  +      +  +   T + +     I   
Sbjct: 34  VAIVIIGGAEFLLRFFEVKEFVMPTPSAIVTALFEHSGEIAPHLGYTLVELAVGYTIGAS 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A +  +   +  ++ P + ++ + P+L  +   ++ F   Y  ++I   LAA   
Sbjct: 94  IGMILAAVITQFPFVEKIITPYILLLVTTPMLALVPLLILNFGFGYAPRIIAVALAAGPM 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +          +       + +D   ++RS+  + +Q F  + VP +MP ++  +MM   
Sbjct: 154 VM--------INSATGFRRVDQDKIALARSYGATTFQIFTKIRVPMAMPMIIVGLMMGAI 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 + +EM   G       G+GS +   +  ++  +  A++  +  M   I+++   
Sbjct: 206 FSVITAIGAEMSGGG------FGLGSKLTTFSSTLRTAEFFAVILILAIMGICIYVFFSW 259

Query: 259 LFRPMIVW 266
           L + +  W
Sbjct: 260 LGKKLAGW 267



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    ++    +      T+  + V   I + I + +   I   P +   I P+  LL  
Sbjct: 62  IVTALFEHSGEIAPHLGYTLVELAVGYTIGASIGMILAAVITQFPFVEKIITPYILLLVT 121

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++    + +        + +       ++ N   G      D   +A S+ 
Sbjct: 122 TPMLALVPLLILNFGFGYA----PRIIAVALAAGPMVMINSATGFRRVDQDKIALARSYG 177

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T ++ +  I +P   P  + G +     +   +I +E++  G       GLG+ +   +
Sbjct: 178 ATTFQIFTKIRVPMAMPMIIVGLMMGAIFSVITAIGAEMSGGG------FGLGSKLTTFS 231

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
                 E    +LI+    + +  F 
Sbjct: 232 STLRTAEFFAVILILAIMGICIYVFF 257


>gi|229546709|ref|ZP_04435434.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX1322]
 gi|256854287|ref|ZP_05559651.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|307292455|ref|ZP_07572309.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|229308169|gb|EEN74156.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX1322]
 gi|256709847|gb|EEU24891.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|306496486|gb|EFM66049.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315029034|gb|EFT40966.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 211

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 69/178 (38%), Gaps = 15/178 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+++ +           +  ++  +++ +   +Q++P L  L   +  F         
Sbjct: 24  FFALLLGVAIAVPVGVWLTRLPKVANIVIGLTSALQTVPSLALLALMIPIFGVG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +  AI A+F   +  +  + Y  + N+  +  +V++   ++  Q  + + +P +MP +
Sbjct: 78  --KTPAIIALFIYSLLPILRNTYIGMKNVDENYRDVAKGMGMTNLQSIFSVELPIAMPTI 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +  + ++      +V+A   +    + I   G+G  I   +       I    + +  
Sbjct: 136 MAGIRLAA----VYVIAWATLA---SYIGAGGLGDMIFSGLNNYQPELIFGGTIPVTI 186



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 15/172 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +++   I +PVG+W+   P +++ +      L   P+     L++            
Sbjct: 24  FFALLLGVAIAVPVGVWLTRLPKVANIVIGLTSALQTVPSLALLALMIPIFGVG----KT 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G      ++++VA    +T  +    + LP   P  + G 
Sbjct: 80  PAIIALFIYSLLPILRNTYIGMKNVDENYRDVAKGMGMTNLQSIFSVELPIAMPTIMAGI 139

Query: 511 ITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             A     AW              ++   GLG  I           +  G +
Sbjct: 140 RLAAVYVIAWATL---------ASYIGAGGLGDMIFSGLNNYQPELIFGGTI 182


>gi|206579849|ref|YP_002238453.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|206568907|gb|ACI10683.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQY-ASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+ +     D +   P       L       +  R+L+ + +S L        A   
Sbjct: 44  LLPGLSQMVAAIDRMAFTPDKRSGEYLLWADTLISLSRLLTGLAVSSLIGLGIGIAAGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P+L ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PMYRAALSPLLTVVSMIPPLAILPVLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IP +L   +++   + W     + +P  +  L+ ++ + +   W F++++E I
Sbjct: 156 LEQRTREIPAELFIKAQTLGANSWTLVLRVVLPQLLSRLITSLRLLLGSAWLFLISAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  I+  ++ +  + +L D  L
Sbjct: 216 S------ATAGLGYRIFLVRRYMAMDVIIPYVIWITLLAWLMDLAL 255



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R++  + ++S+I + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  LISLSRLLTGLAVSSLIGLGIGIAAGVFPMYRAALSPLLTVVSMIPPLAILPVLFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++       P +    A +     W     ++LP + 
Sbjct: 136 DELSK----VMLIVIGITPMLARDLEQRTREIPAELFIKAQTLGANSWTLVLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +T      G AW   I +E  S       T GLG  I       +   ++  V+ + 
Sbjct: 192 SRLITSLRLLLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVIIPYVIWIT 245

Query: 564 CFVLALNRFLWH 575
                ++  L  
Sbjct: 246 LLAWLMDLALRQ 257


>gi|221134506|ref|ZP_03560811.1| putative sulfonate ABC transporter, permease protein [Glaciecola
           sp. HTCC2999]
          Length = 259

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 95/255 (37%), Gaps = 15/255 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             ++R     I   L  ++   ++ +      +     + +           L      T
Sbjct: 12  SLVARTTLIKISVFLCLLIGWQLLAM-GLDSPDFPSFINTLAAFHYHASQGDLLNNVFIT 70

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R+  +  +++L   V   L        ++   +L I+ +IP L  +  + ++      
Sbjct: 71  VTRVGISFTLAMLLGSVMGILMGARAWFNIITDSVLIILLNIPALVVIILSYIWIGL--- 127

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 E AAI A+  +++  +   + +        L E++R + +S ++   Y+ +P  
Sbjct: 128 -----VEAAAITAVVINKIPTVAVMLREGARTTDPKLTELARVYNISWFRYLRYIYLPQL 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P L+      +S  W  V+  E++          G+G  +    +  D+  IL   +  
Sbjct: 183 YPFLLAAARNGLSLIWKIVLVVELLG------RSDGVGFALHSMFQFFDIAGILAYTMAF 236

Query: 249 LGVIFLYDQLLFRPM 263
           + V+FL + + F+P 
Sbjct: 237 ITVVFLIELVCFKPF 251



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 10/233 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L I W  +  G+        I  +     +     ++    IT+ RV +   +A ++   
Sbjct: 28  LLIGWQLLAMGLDSPDFPSFINTLAAFHYHASQGDLLNNVFITVTRVGISFTLAMLLGSV 87

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI +G R   +        +L   PA V   L    +              ++      
Sbjct: 88  MGILMGARAWFNIITDSVLIILLNIPALVVIILSYIWIGLVEA----AAITAVVINKIPT 143

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +   +  GA        E+A  ++I+ +R+ RYI LP ++P+ +  A       W   +V
Sbjct: 144 VAVMLREGARTTDPKLTELARVYNISWFRYLRYIYLPQLYPFLLAAARNGLSLIWKIVLV 203

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
            E+        R+ G+G  +    +      ++   +     V  +    + P
Sbjct: 204 VELLG------RSDGVGFALHSMFQFFDIAGILAYTMAFITVVFLIELVCFKP 250


>gi|89896246|ref|YP_519733.1| hypothetical protein DSY3500 [Desulfitobacterium hafniense Y51]
 gi|89335694|dbj|BAE85289.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 267

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 105/258 (40%), Gaps = 16/258 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           +LP   ++ ++ +     A +LV  +    +     +   VP     +  +T ++ +L  
Sbjct: 9   LLPKLRAKMLYLSWLLTAAVLLVAALDMATLKTGHFRLPFVPSPDKILSSVTSNLETLAV 68

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               +   + + +VI ++   +   L   S+      +P+L ++  +P   +L   +V F
Sbjct: 69  SLYFSMKLLFTGIVIGIISGMISGILLGWSQICNYWFMPVLKMIGPVPSAAWLPIVMVLF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +  A++F I  S  + +T  +  ++ +  + L E +R    S      ++
Sbjct: 129 AT--------SRQASVFLIVLSIWFPLTLMVSSAIRDTDKRLVETARVLGASEVYIMLHV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P +   + M +S  +  ++ +EM+ V        G+G YI  A    +   I  
Sbjct: 181 ALPAALPAMFTGLFMGLSSSFSALIIAEMLGV------EAGLGWYIKWAEAWGEYAKIFS 234

Query: 244 AMLTMLGVIFLYDQLLFR 261
            +   + + F+    LFR
Sbjct: 235 TVGIFIIIFFILMDTLFR 252



 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M  +   I+I  I  +  GI +G+    +    P  +++   P+  + P+V+   + 
Sbjct: 71  YFSMKLLFTGIVIGIISGMISGILLGWSQICNYWFMPVLKMIGPVPSAAWLPIVMVLFA- 129

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++    + +   V +          E A     +      ++ LP   
Sbjct: 130 ---TSRQASVFLIVLSIWFPLTLMVSSAIRDTDKRLVETARVLGASEVYIMLHVALPAAL 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG       +++A I++E+           GLG YI  +   G + ++   V I  
Sbjct: 187 PAMFTGLFMGLSSSFSALIIAEMLG------VEAGLGWYIKWAEAWGEYAKIFSTVGIFI 240

Query: 564 CFVLALNRFLWH 575
                L   L+ 
Sbjct: 241 IIFFILMDTLFR 252


>gi|224531579|ref|ZP_03672211.1| phosphate ABC transporter, permease protein [Borrelia valaisiana
           VS116]
 gi|224511044|gb|EEF81450.1| phosphate ABC transporter, permease protein [Borrelia valaisiana
           VS116]
          Length = 478

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPVFGMGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPVFGMGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMILIINLTSKFLINKLYR 476


>gi|71279687|ref|YP_268659.1| putative sulfonate ABC transporter permease [Colwellia
           psychrerythraea 34H]
 gi|71145427|gb|AAZ25900.1| putative sulfonate ABC transporter, permease protein [Colwellia
           psychrerythraea 34H]
          Length = 255

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 102/245 (41%), Gaps = 14/245 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
              ++  +  +      +    +      +++ V   L+   +      T  R+L + +I
Sbjct: 14  RLGVIIVISALWQGLAWVIASPDFPSLFAVINSVQFHLNEGEMVTNILITLRRVLLSFII 73

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++L   +   +   + R+  +   +L IM +IP L  +    ++F           E AA
Sbjct: 74  AMLLGGIIGIMMGVNARINKLSDSLLIIMLNIPALVTILLCYIWFGL--------VESAA 125

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I A+  +++  +   + +    + +DL  V++ ++LS  + F+ + +P   P ++ +   
Sbjct: 126 IAAVVINKIPTVVVMIREGARAVDKDLLAVAKIYQLSASKTFFNVFLPQLYPFIIASARS 185

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +S  W  V+  E++          G+G  +    +  D+  IL   L  + +I L + L
Sbjct: 186 GLSLIWKIVLVVELLG------RSDGVGFALNTLFQFFDIAGILAYTLVFVVIILLIEAL 239

Query: 259 LFRPM 263
           +F+P 
Sbjct: 240 IFKPF 244



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 88/247 (35%), Gaps = 10/247 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  ++   W  +   +A          I +   + +   ++    IT+ RV++  IIA +
Sbjct: 17  VIIVISALWQGLAWVIASPDFPSLFAVINSVQFHLNEGEMVTNILITLRRVLLSFIIAML 76

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   +GI +G    I+        ++   PA V   L                   ++  
Sbjct: 77  LGGIIGIMMGVNARINKLSDSLLIIMLNIPALVTILLCYIWFGLV----ESAAIAAVVIN 132

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++  +  GA A   D   VA  + ++  + +  + LP ++P+ +  A +     W 
Sbjct: 133 KIPTVVVMIREGARAVDKDLLAVAKIYQLSASKTFFNVFLPQLYPFIIASARSGLSLIWK 192

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             +V E+        R+ G+G  +    +      ++   L+    +L +   ++ P   
Sbjct: 193 IVLVVELLG------RSDGVGFALNTLFQFFDIAGILAYTLVFVVIILLIEALIFKPFDK 246

Query: 580 YGTRCLR 586
              R  R
Sbjct: 247 LVARGTR 253


>gi|194015757|ref|ZP_03054373.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Bacillus pumilus ATCC 7061]
 gi|194013161|gb|EDW22727.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Bacillus pumilus ATCC 7061]
          Length = 229

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 77/212 (36%), Gaps = 19/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +   R  L     ++ + +         A  R+L   +  I +++Q+IP L  L+ 
Sbjct: 16  SYVLEEFYRHFLMSAYGVLFAAIVGIPVGIFVAHYRKLSNWIFAITNVIQTIPALAMLSV 75

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++                 I ++F   +  +  + Y  + +I     E  ++  ++ WQ
Sbjct: 76  LMLVLGLG--------ANTVIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKWQ 127

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++  ++  +  +       +V +  I    T +   G+G  I       + 
Sbjct: 128 VLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIIRGSNATNG 180

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
            AI+ A      ++ +   L+    + W  ++
Sbjct: 181 TAIILAGAIPTALMAIIADLV----MGWLERY 208



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 11/190 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+I+ IPVGI++     +S+ I     ++   PA     +++  +         
Sbjct: 30  AYGVLFAAIVGIPVGIFVAHYRKLSNWIFAITNVIQTIPALAMLSVLMLVLGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   +   I+ N   G  +  + + E   +  +T W+  R + LP      + G 
Sbjct: 87  -VIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKWQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA   A   + +      G       GLG  I   +   +   ++L   I    +  + 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDIIIRGSNATNGTAIILAGAIPTALMAIIA 198

Query: 571 RFLWHPLYLY 580
             +   L  Y
Sbjct: 199 DLVMGWLERY 208


>gi|66047200|ref|YP_237041.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63257907|gb|AAY39003.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330937679|gb|EGH41581.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 271

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P    R I     F LL F   +G    L     +  +P      D V  +  
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPSDKLLPSAVQMADAVKRMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
             D  S    L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  VADPRSGDYLLWQDSASSLQRLAIGLGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVILPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLQRLAIGLGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     +ILP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|165870724|ref|ZP_02215377.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|190567463|ref|ZP_03020376.1| putative ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813050|ref|YP_002813059.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
 gi|164713558|gb|EDR19082.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|190561250|gb|EDV15222.1| putative ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227005190|gb|ACP14933.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
          Length = 230

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 35  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 93

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 94  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 150

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 151 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 203

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 204 VTLCLYFI 211



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        +++ P+L I Q+IPI+      +
Sbjct: 28  LLPNTMQTLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFI 87

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 88  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 139

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 140 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 192

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 193 RVFGVAAIIVMVTLCLYFI 211


>gi|157693792|ref|YP_001488254.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus pumilus SAFR-032]
 gi|157682550|gb|ABV63694.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Bacillus pumilus
           SAFR-032]
          Length = 229

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 77/212 (36%), Gaps = 19/212 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +   R  L     ++ + +         A  R+L   +  I +++Q+IP L  L+ 
Sbjct: 16  SYVLEEFYRHFLMSAYGVLFAAIVGIPVGIFVAHYRKLSNWIFAITNVIQTIPALAMLSV 75

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++                 I ++F   +  +  + Y  + +I     E  ++  ++ WQ
Sbjct: 76  LMLVLGLG--------SNTVILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKWQ 127

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++  ++  +  +       +V +  I    T +   G+G  I       + 
Sbjct: 128 VLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIIRGSNATNG 180

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
            AI+ A      ++ +   L+    + W  ++
Sbjct: 181 TAIILAGAIPTALMAIIADLV----MGWLERY 208



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 11/190 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+I+ IPVGI++     +S+ I     ++   PA     +++  +         
Sbjct: 30  AYGVLFAAIVGIPVGIFVAHYRKLSNWIFAITNVIQTIPALAMLSVLMLVLGLGSNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T W+  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKWQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA   A   + +      G       GLG  I   +   +   ++L   I    +  + 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDIIIRGSNATNGTAIILAGAIPTALMAIIA 198

Query: 571 RFLWHPLYLY 580
             +   L  Y
Sbjct: 199 DLVMGWLERY 208


>gi|124385635|ref|YP_001026342.1| permease [Burkholderia mallei NCTC 10229]
 gi|126450587|ref|YP_001080384.1| permease [Burkholderia mallei NCTC 10247]
 gi|254178339|ref|ZP_04884994.1| permease [Burkholderia mallei ATCC 10399]
 gi|254358544|ref|ZP_04974817.1| permease [Burkholderia mallei 2002721280]
 gi|124293655|gb|ABN02924.1| permease [Burkholderia mallei NCTC 10229]
 gi|126243457|gb|ABO06550.1| permease [Burkholderia mallei NCTC 10247]
 gi|148027671|gb|EDK85692.1| permease [Burkholderia mallei 2002721280]
 gi|160699378|gb|EDP89348.1| permease [Burkholderia mallei ATCC 10399]
          Length = 313

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|291543214|emb|CBL16323.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ruminococcus sp. 18P13]
          Length = 269

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 79/184 (42%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R  +  +I +++   + + +     +     P+  ++   P     P++++     +
Sbjct: 77  TLSRAAIGFLIGTVLGYLLALLMNLSGIVEKIAFPYLMIIQMIPILGMAPIILAITGDIN 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  +  ++L    T + +  N +AG  A   +  E+  S+  + ++ +   I+P   PY
Sbjct: 137 TSRIVIAAIL----TFYPVSTNTLAGFKAVEKEKHELMYSYAASKFQHYIKTIIPSSIPY 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + TG   +   A  ASI+ +    G+      GLG  +++S + G    V   ++++   
Sbjct: 193 FFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGGMSRLVFWDIVLISAV 246

Query: 566 VLAL 569
           +  L
Sbjct: 247 IGIL 250



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 76/194 (39%), Gaps = 14/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T  R     +I  +  ++ A L   S  +  +  P L I+Q IPILG     +    +
Sbjct: 75  AETLSRAAIGFLIGTVLGYLLALLMNLSGIVEKIAFPYLMIIQMIPILGMAPIILAITGD 134

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           +   +++ A +   + + T        +       + ++  E+  S+  S +Q +    +
Sbjct: 135 INTSRIVIAAILTFYPVST--------NTLAGFKAVEKEKHELMYSYAASKFQHYIKTII 186

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+P     + +S        +  + +  G+      G+G  ++ ++K      + + +
Sbjct: 187 PSSIPYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGGMSRLVFWDI 240

Query: 246 LTMLGVIFLYDQLL 259
           + +  VI +    L
Sbjct: 241 VLISAVIGILSFYL 254


>gi|90420892|ref|ZP_01228797.1| ABC-transporter permease component [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334867|gb|EAS48639.1| ABC-transporter permease component [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 244

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 14/246 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L    I  ++   +    P  + D          L  + + T +R+ +A  I+++    
Sbjct: 9   LLAAWWIAAVIADSRVLPTPPAVFDAFWRDAVTGELFYHLAMTLMRVAAAFAIAMIIGSA 68

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                    R      P L +  +IP L  +    ++F           E AA+ AI  +
Sbjct: 69  IGVGLGMDARADRFFDPWLILFLNIPALVVIALAYIWFGLN--------EAAAVGAIAIN 120

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           ++ N+  +M +   ++ R L E++  +R   W+    + +P   P         ++  W 
Sbjct: 121 KIPNVVVTMREGARSLDRGLSEMASVYRFGRWRTLRDVVLPQLQPYFAAASRSGIALIWK 180

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
             +  E++   +      G+G  I L  +  D+ AIL   L  + ++ L + LL +P+  
Sbjct: 181 IALVVELLGRSN------GVGFQIHLYFQLFDVAAILAYTLAFVAIMLLIEFLLVQPLEA 234

Query: 266 WSNKFR 271
            + ++R
Sbjct: 235 HATRWR 240



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 75/207 (36%), Gaps = 10/207 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   +T+ RV     IA II   +G+ +G          P+  L    PA V   L
Sbjct: 42  GELFYHLAMTLMRVAAAFAIAMIIGSAIGVGLGMDARADRFFDPWLILFLNIPALVVIAL 101

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                          +++         ++  +  GA +      E+AS +    WR  R 
Sbjct: 102 AYIWFGLNEAAAVGAIAI----NKIPNVVVTMREGARSLDRGLSEMASVYRFGRWRTLRD 157

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + PY+   + +     W  ++V E+        R+ G+G  I    +      ++
Sbjct: 158 VVLPQLQPYFAAASRSGIALIWKIALVVELLG------RSNGVGFQIHLYFQLFDVAAIL 211

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
              L     +L +   L  PL  + TR
Sbjct: 212 AYTLAFVAIMLLIEFLLVQPLEAHATR 238


>gi|126464641|ref|YP_001045754.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332560785|ref|ZP_08415103.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|126106452|gb|ABN78982.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332274583|gb|EGJ19899.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 281

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   + G   + + ++  +       Y++     T   V    ++A+ I   +G+ 
Sbjct: 48  WVSPIILPSPGETLEDLIFVGRNLLTG--GYMLEALWTTTRTVFWAFLLATGIGFSLGVL 105

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G        + P+   +   P   F PL ++ + +           L  F   + I+ +
Sbjct: 106 VGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGF----DIASKVALAAFIATFPIVVS 161

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG  +   + + +  +   +  +    + LP   P+  TG   A  G    +I  E  
Sbjct: 162 TAAGLYSASENERMLFKAMGASRLQTLLRLKLPNGLPHIFTGLKIAAVGVMAGAITGEFL 221

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             G       G GA I +S  +   P V  
Sbjct: 222 GGG------RGFGALIRQSASQMDTPRVFA 245



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 24/237 (10%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----------LDVHSLPQYAS 66
           P    +LA  +V+  I  L         P  +                 L    + +   
Sbjct: 23  PRWVAMLALAVVVVAIWDLATARMGWVSPIILPSPGETLEDLIFVGRNLLTGGYMLEALW 82

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TT  +  A +++    F    L  +++     ++P L  + ++P + F    + +    
Sbjct: 83  TTTRTVFWAFLLATGIGFSLGVLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGFD 142

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV  A   A F         +  S    L +   +   + ++   S  Q    L +P
Sbjct: 143 IASKVALAAFIATF--------PIVVSTAAGLYSASENERMLFKAMGASRLQTLLRLKLP 194

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +P +   + ++  G     +  E +  G       G G+ I  +  + D   +  
Sbjct: 195 NGLPHIFTGLKIAAVGVMAGAITGEFLGGG------RGFGALIRQSASQMDTPRVFA 245


>gi|94310540|ref|YP_583750.1| substrate-binding region of ABC-type glycine betaine transport
           system [Cupriavidus metallidurans CH34]
 gi|93354392|gb|ABF08481.1| ABC-type transporter: periplasmic glycine betaine/choline-binding
           lipoprotein and permease components transmembrane
           [Cupriavidus metallidurans CH34]
          Length = 516

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 27/195 (13%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             R    +  ++  + L       +AA+ RR G VL+ ++ ++Q+IP L  L   +    
Sbjct: 318 TVRHLALVGGSVGAATLVGVPLGVVAARRRRFGQVLLALVGMLQTIPSLALLAMLIPALG 377

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +           A+ A+F   +  +  +    L  +P  + + + +  +   Q  WY+ 
Sbjct: 378 RIGI-------WPALVALFLYALLPIVRNACTGLQEVPAGMRDAALALGMRPLQVLWYVE 430

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQDL-- 238
           +P S+P L+  +             + +I VG   I       G G  I   +   D   
Sbjct: 431 LPLSLPVLLAGIKT-----------AAIISVGTATIAAFVGAGGYGERIVTGLALNDATQ 479

Query: 239 ---LAILYAMLTMLG 250
               AI  A+L ++ 
Sbjct: 480 LLGGAIPAALLALVV 494



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 8/185 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V   +  A+++ +P+G+    R      +     +L   P+     +++  +    +
Sbjct: 322 LALVGGSVGAATLVGVPLGVVAARRRRFGQVLLALVGMLQTIPSLALLAMLIPALGRIGI 381

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L    L        I+ N   G    P   ++ A +  +   +   Y+ LP   P  
Sbjct: 382 WPALVALFLY---ALLPIVRNACTGLQEVPAGMRDAALALGMRPLQVLWYVELPLSLPVL 438

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEK--GSFPEVVLGVLIMC 563
           + G  TA   +   A+I + V + G+     TGL   + ++T+   G+ P  +L +++  
Sbjct: 439 LAGIKTAAIISVGTATIAAFVGAGGYGERIVTGL--ALNDATQLLGGAIPAALLALVVQG 496

Query: 564 CFVLA 568
            F LA
Sbjct: 497 GFGLA 501


>gi|330953585|gb|EGH53845.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 203

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 8/198 (4%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-AIGIAWQSI 364
           F  ++   +      G  R+  P + L+L S   +    ++     +  V  I    Q  
Sbjct: 13  FLVVNKPAQGRASQPGRPRWQVPGSVLRLLSPLALLLFWELASHTGLLPVRVIAAPSQIG 72

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
           G + +     ++ + +W   +++ R ++ + I   I +   +  G        +    Q+
Sbjct: 73  GTLWSMIVSGELAHHLW---VSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQM 129

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +   P+    PL +                L++ GT + +  N+ +G         E A+
Sbjct: 130 MRTVPSLALVPLFILWFGIG----EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAAN 185

Query: 485 SFHITGWRWWRYIILPGI 502
           +  ++      ++ILPG 
Sbjct: 186 TLGLSRRELIWHVILPGS 203



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 8/146 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +    L  +   +  R L  + I +    V A +   SRR  +VL  
Sbjct: 66  AAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDS 125

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + +M+++P L  +   +++F           E   +  I     + +  +++  + NI 
Sbjct: 126 PMQMMRTVPSLALVPLFILWFGIG--------EFTKVALIVMGTTFPVYLNLFSGIRNID 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFS 188
             L E + +  LS  +  W++ +P S
Sbjct: 178 PKLIEAANTLGLSRRELIWHVILPGS 203


>gi|257784753|ref|YP_003179970.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium parvulum DSM 20469]
 gi|257473260|gb|ACV51379.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium parvulum DSM 20469]
          Length = 293

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 18/263 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIWLG 383
           +   ++ S+  V   + +FW  +   VA+      +    I  I   F+   +       
Sbjct: 38  QTIRKIISSWGVRLGVLVFWLAIWQIVAVAINQDIVLTSPIQTIQTLFSLAQLREFWVSI 97

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R+ V   +A      +         +    +P    + + P   F  L++  V  
Sbjct: 98  GLSLLRIFVGGALAFTAGSLLAFLSFKYKLVKLLFEPLISTIKSIPVASFVILLLIWVRT 157

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +L+ ++             I   V+ G         E+A+ + I GW   + I L  + 
Sbjct: 158 PYLSISIS-----FLMALPIIYIAVLEGLLGTDQKLIEMANVYQIHGWYRVKAIYLSQLM 212

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T    A G  W + I +EV       L T  +G ++  +      P +    L++ 
Sbjct: 213 PSLKTATSLAMGFCWKSGIAAEVIG-----LPTFSIGEHLYNAKVYLDTPALFAWTLVVI 267

Query: 564 CFVLALNRFL-WHPLYLYGTRCL 585
              +   + + W  L  +    L
Sbjct: 268 VMSVLGEKIVMW--LVSWAATRL 288



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 103/246 (41%), Gaps = 15/246 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ ++ +  I+ + ++     T P   +  +     +         + LR+     ++  
Sbjct: 54  LVFWLAIWQIVAVAINQDIVLTSPIQTIQTLFSLAQLREFWVSIGLSLLRIFVGGALAFT 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A L+ K + + ++  P++  ++SIP+  F+   +++    Y          +I  
Sbjct: 114 AGSLLAFLSFKYKLVKLLFEPLISTIKSIPVASFVILLLIWVRTPY---------LSISI 164

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  ++ + L    + L E++  +++ GW +   + +   MP L     ++M 
Sbjct: 165 SFLMALPIIYIAVLEGLLGTDQKLIEMANVYQIHGWYRVKAIYLSQLMPSLKTATSLAMG 224

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   +A+E+I +     P   IG ++  A    D  A+    L ++ +  L ++++  
Sbjct: 225 FCWKSGIAAEVIGL-----PTFSIGEHLYNAKVYLDTPALFAWTLVVIVMSVLGEKIVM- 278

Query: 262 PMIVWS 267
            ++ W+
Sbjct: 279 WLVSWA 284


>gi|226196363|ref|ZP_03791945.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|254297716|ref|ZP_04965169.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157807769|gb|EDO84939.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|225931580|gb|EEH27585.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 313

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|239833499|ref|ZP_04681827.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239821562|gb|EEQ93131.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 530

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 65/554 (11%), Positives = 164/554 (29%), Gaps = 62/554 (11%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              + + +  + +  I       I +  +P     +  + +D    P +   T     + 
Sbjct: 17  LSTLRNWIILLAIWEICGRFSL-IADGALPAPSAILARLWIDRADYPAHILATLEGAGAG 75

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I  L       L A       +   +   + ++P +      V+ F  + P       
Sbjct: 76  FIIGNLIAVAAGILFALFPAAAKLGRGVNIAIFALPPIAISPILVLTFSGMTPR------ 129

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              I        +    +    +    R + ++ R++  + W+      +  ++P ++  
Sbjct: 130 ---ITLAALGCYFITMAATVTGISQTDRRMIDIVRAYGGNRWKVLRLAQLRSALPSILAG 186

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++        + +E    G   +    IGS      +   L  I      + G+ +  
Sbjct: 187 LRIAAPNAVLGSILAEFGGGGRFGLGAYLIGSL--GRAEPTRLWGIGLCATLLAGLAYAL 244

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
             ++ + +           T  I    S    +  ++  L ++          L   +  
Sbjct: 245 FSVVAKVLT--------GSTKAITVPASAPDVVQHRSRGLNYVLTVCSVALPFLLWWLLL 296

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           +      +    P                 +F +  +   A     + +  ++       
Sbjct: 297 VVMGTPAMIAKTPA---------------GLFDYLFLAPSATAAQTKLLTALLQTLPLT- 340

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                           + +    +    + I    +P I     P A +    P     P
Sbjct: 341 ---------------FLGMAAGILFAFALAIASVAKPAIVRGFMPVALVTQTMPLVALTP 385

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  +     +  LW+++ +   T +     +  G +  P    +V  ++    W+  R
Sbjct: 386 LLVLLLGRGP-SVILWITISV---TFFPAFVTMAQGMALVPRAALDVPRAYGANVWKQIR 441

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + +P   PY       A   A    +++E  + G      TGLG  + +S     +  +
Sbjct: 442 LVSVPASLPYLFAAIRLAVPRALLGVMIAEWLATG------TGLGNLLNQSRGYLDYG-M 494

Query: 556 VLGVLIMCCFVLAL 569
           +  V ++   +   
Sbjct: 495 IWAVAVVSVMLSVF 508



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 81/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T       M   +LF F  A  +     +    +P+  + Q++P++  LT  +
Sbjct: 329 LLTALLQTLPLTFLGMAAGILFAFALAIASVAKPAIVRGFMPVALVTQTMPLVA-LTPLL 387

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V  +   P  ++   ++  F       +    +M Q +  +PR   +V R++  + W++ 
Sbjct: 388 VLLLGRGPSVILWITISVTF-------FPAFVTMAQGMALVPRAALDVPRAYGANVWKQI 440

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP S+P L   + +++      V+ +E +  G       G+G+ +  +    D   
Sbjct: 441 RLVSVPASLPYLFAAIRLAVPRALLGVMIAEWLATGT------GLGNLLNQSRGYLDYGM 494

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I    +  + +   + Q++
Sbjct: 495 IWAVAVVSVMLSVFFYQIV 513


>gi|88854326|ref|ZP_01128993.1| permease protein of ABC transporter [marine actinobacterium
           PHSC20C1]
 gi|88816134|gb|EAR25989.1| permease protein of ABC transporter [marine actinobacterium
           PHSC20C1]
          Length = 277

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++   VV   +A +I IP+G+ +G    +   + P A  + A P+  + PL  +   + 
Sbjct: 83  ASLQAWVVGFGLALVIAIPLGLLLGVSLPVDRIVGPIAWAIYATPSVAYQPLAKAWFGFG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +  L++    + I+FN+ AG           A  +  + +R +  I LP   P
Sbjct: 143 IG----PVVFLVLVSAVFPIMFNLAAGIRTTNTSIISAAKVYGASKFRLYPAIYLPSTVP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +   G       A    +V+E+           G+GA I  ST      +    ++++  
Sbjct: 199 FLFAGLRQGVVLATIGMMVAEL------SGAAVGMGALIIRSTNTYQVGQAFAAIMLVVI 252

Query: 565 FVLAL 569
           F +++
Sbjct: 253 FTISM 257



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 90/259 (34%), Gaps = 19/259 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           RI     +++  + +  ++  +   I       P  I   +   L   ++   A  +   
Sbjct: 28  RILLISAEVVVMLALWQLVVGVFRWINPVFVPAPLSIFSGLGDILSSGAVAANAPASLQA 87

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    ++L+       L   S  +  ++ PI   + + P + +      +F        
Sbjct: 88  WVVGFGLALVIAIPLGLLLGVSLPVDRIVGPIAWAIYATPSVAYQPLAKAWFGFGIGP-- 145

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +F +  S V+ + F++   +      +   ++ +  S ++ +  + +P ++P 
Sbjct: 146 ------VVFLVLVSAVFPIMFNLAAGIRTTNTSIISAAKVYGASKFRLYPAIYLPSTVPF 199

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   +   +      ++ +E+           G+G+ I  +     +     A++ ++  
Sbjct: 200 LFAGLRQGVVLATIGMMVAEL------SGAAVGMGALIIRSTNTYQVGQAFAAIMLVVIF 253

Query: 252 IFLYDQ---LLFRPMIVWS 267
                Q   L+ R +  W+
Sbjct: 254 TISMVQVTTLVERWVAPWT 272


>gi|309789819|ref|ZP_07684398.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308228123|gb|EFO81772.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 259

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 22  LLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           LL  +++   +++   +       P  + D    T     L ++ S T +  L    I+L
Sbjct: 23  LLGLLVLWQAVVSWGNYRAFILPAPSQVWDRFVATAMSGLLWRHTSATLVEALGGFSIAL 82

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       + A    L   + PIL   Q++P++      +++F      K++ A L    
Sbjct: 83  MLGLSLGYVLAHIPWLERAISPILAASQAVPVVAIAPLIILWFGPGLQSKLLIAALITFL 142

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  S   +L +I  +L E++     S WQ   Y+    ++P L   +   +
Sbjct: 143 --------PILLSTVIALRSIAPELREMALISGASRWQMLRYVESALALPVLFGGVRTGL 194

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +      V  E +   +      G+G+ I +A    D   I  
Sbjct: 195 ALATTGAVVGEFVAGRE------GLGALINIARGLFDTPLIFV 231



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 11/238 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
                    +   L     +  +L ++   V  G        +   + + F    +  ++
Sbjct: 4   AARPLRRRFDLHWLGLPVALLGLLVLWQAVVSWGNYRAFILPAPSQVWDRFVATAMSGLL 63

Query: 381 WL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           W     T+   +    IA ++ + +G  +   P +   I P      A P     PL++ 
Sbjct: 64  WRHTSATLVEALGGFSIALMLGLSLGYVLAHIPWLERAISPILAASQAVPVVAIAPLIIL 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +      L+    T   IL + +    +   + +E+A     + W+  RY+  
Sbjct: 124 WFGPGLQSK----LLIAALITFLPILLSTVIALRSIAPELREMALISGASRWQMLRYVES 179

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
               P    G  T    A   ++V E  +         GLGA I  +      P + +
Sbjct: 180 ALALPVLFGGVRTGLALATTGAVVGEFVAGRE------GLGALINIARGLFDTPLIFV 231


>gi|255526488|ref|ZP_05393398.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296185857|ref|ZP_06854263.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255509807|gb|EET86137.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296049525|gb|EFG88953.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 265

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT    +   ++++I+   + I + +   +   + P+  +L A P     P+++
Sbjct: 70  LFNNIGITCIETIFGFLLSTILGTLIAILLWWSDFVCKVLDPYIVVLNALPKIALAPIII 129

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V     N    + ++ +       + +V+ G      D  ++  +F  +  +   ++I
Sbjct: 130 FWVG----NGIKAIVVVTLLIAIVVTIISVLNGFKEVDTDKIKLLRTFGASKLQILIHLI 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  V+      G +W   I+ E        +   GLG  I    +      V+L 
Sbjct: 186 IPSSVPTLVSSLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDTVMLS 239

Query: 559 VLIMCCFVLAL 569
           +LI+      +
Sbjct: 240 ILILSILAYVM 250



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L      T +  +   ++S +   + A L   S  +  VL 
Sbjct: 51  TSTPSRMWKSLLKLYSEGALFNNIGITCIETIFGFLLSTILGTLIAILLWWSDFVCKVLD 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      + +  N     V+   L AI             S+      +
Sbjct: 111 PYIVVLNALPKIALAPIIIFWVGNGIKAIVVVTLLIAIVV--------TIISVLNGFKEV 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ R+F  S  Q   +L +P S+P LV ++ +++   W  V+  E +V  +    
Sbjct: 163 DTDKIKLLRTFGASKLQILIHLIIPSSVPTLVSSLKINVGLSWVGVIMGEFLVAKE---- 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   L  ++ ++L +  + ++ 
Sbjct: 219 --GLGFLIIYGGQISQLDTVMLSILILSILAYVM 250


>gi|296127455|ref|YP_003634707.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
 gi|296019271|gb|ADG72508.1| binding-protein-dependent transport systems inner membrane
           component [Brachyspira murdochii DSM 12563]
          Length = 242

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 92/191 (48%), Gaps = 15/191 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+ +A ++S L  F++  L+     L  +L+PI++ +++IP +  +   V++F 
Sbjct: 56  LMYSIVRVFAAFILSFLSAFLFGVLSGIFLPLRYILMPIINFIRTIPTIPLILVAVIWF- 114

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  I   +  IF I    + N        + N+ ++L E+S S+ +S   +   L 
Sbjct: 115 -DNDTVPIFVSMLVIFPIIYDAITN-------GIINVDKNLIEMSLSYNVSLKNQIINLY 166

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-Y 243
           +P+  P ++  +  SM   W  ++A+E++ +     P  GIGS +  +    D +++  Y
Sbjct: 167 IPYIKPYVLTALSQSMGITWKSILAAEILAL-----PSFGIGSRLYESHLYLDTVSLFAY 221

Query: 244 AMLTMLGVIFL 254
           +++ ++    L
Sbjct: 222 SLIAVIFNAVL 232



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ RV    I++ +     G+  G    +   + P    +   P      + V       
Sbjct: 59  SIVRVFAAFILSFLSAFLFGVLSGIFLPLRYILMPIINFIRTIPTIPLILVAVIWF---- 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              N  + + +     + I+++ I  G      +  E++ S++++       + +P I P
Sbjct: 115 --DNDTVPIFVSMLVIFPIIYDAITNGIINVDKNLIEMSLSYNVSLKNQIINLYIPYIKP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y +T    + G  W + + +E+ +     L + G+G+ + ES        +    LI   
Sbjct: 173 YVLTALSQSMGITWKSILAAEILA-----LPSFGIGSRLYESHLYLDTVSLFAYSLIAVI 227

Query: 565 FVLALNRFL 573
           F   L   +
Sbjct: 228 FNAVLEIII 236


>gi|53719435|ref|YP_108421.1| hypothetical protein BPSL1822 [Burkholderia pseudomallei K96243]
 gi|52209849|emb|CAH35821.1| putative membrane protein [Burkholderia pseudomallei K96243]
          Length = 323

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 116 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 175

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 176 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 227

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 228 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 285

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 286 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 316



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 52  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 111

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 112 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 168

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 169 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 224

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 225 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 283 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 317


>gi|300088009|ref|YP_003758531.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527742|gb|ADJ26210.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 396

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 15/205 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL-----T 117
           Q   R  +    ++  + L        AA+ RR    +  + +I Q+IP L         
Sbjct: 182 QELFRHLMLAGVSVGAAALAGVSLGVWAARHRRSEKFIFAVTNITQTIPSLALFGLMIAP 241

Query: 118 FTVVYFMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            + + F   +    G        A+ A+F   +  +  + +  L  I   + +  R   +
Sbjct: 242 LSFLSFQFPFLREIGIRGIGVAPAVIALFIYSLLPIVRNTFIGLRQIDAGVMDAGRGMGM 301

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q F  + +P +MP ++  + ++        V +  +     +I   G+G +I   + 
Sbjct: 302 SRGQLFRRIEIPLAMPLILEGLRIA-------SVQAVGLTAVAALIGAGGLGWFIFQGLG 354

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
           +     IL   L ++ +  + D ++
Sbjct: 355 QAAPDMILLGTLPIIALALVVDAVM 379



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 66/194 (34%), Gaps = 19/194 (9%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V +  A++  + +G+W          I     +    P+   F L+++ +S+        
Sbjct: 193 VSVGAAALAGVSLGVWAARHRRSEKFIFAVTNITQTIPSLALFGLMIAPLSFLSFQFPFL 252

Query: 452 ------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                         + +   +   I+ N   G         +      ++  + +R I +
Sbjct: 253 REIGIRGIGVAPAVIALFIYSLLPIVRNTFIGLRQIDAGVMDAGRGMGMSRGQLFRRIEI 312

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G   A   A   + V+ +   G       GLG +I +   + +   ++LG 
Sbjct: 313 PLAMPLILEGLRIASVQAVGLTAVAALIGAG-------GLGWFIFQGLGQAAPDMILLGT 365

Query: 560 LIMCCFVLALNRFL 573
           L +    L ++  +
Sbjct: 366 LPIIALALVVDAVM 379


>gi|269961326|ref|ZP_06175691.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833877|gb|EEZ87971.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 276

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 77/195 (39%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            S + +R+   + IS L              +   L P++  +  IP +  L    + F 
Sbjct: 76  TSASLVRLGWGIGISALLGLSLGIATGIIPLVRSSLSPVITAVSLIPPMAILPILFISFG 135

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E++ +  I       +   +   + ++P +    +++   + WQ    + 
Sbjct: 136 VG--------EVSKVVLIVVGVCPIIIRDIQLRVQSLPDEQLIKAQTLGANSWQIIVRVI 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  MP L+  + +++   W F++A+E IV  +      G+G  I L  +   +  IL  
Sbjct: 188 LPQIMPKLIEAVRLTLGSAWLFLIAAEAIVATE------GLGYRIFLVRRYLSMDVILPY 241

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  + +  D LL
Sbjct: 242 VLWITILAYCMDWLL 256



 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+   I I++++ + +GI  G  P + S + P    ++  P     P++       
Sbjct: 78  ASLVRLGWGIGISALLGLSLGIATGIIPLVRSSLSPVITAVSLIPPMAILPILFISFGVG 137

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            ++      +L++ G    I+ ++     + P++    A +     W+    +ILP I P
Sbjct: 138 EVSK----VVLIVVGVCPIIIRDIQLRVQSLPDEQLIKAQTLGANSWQIIVRVILPQIMP 193

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +       G AW   I +E        + T GLG  I       S   ++  VL +  
Sbjct: 194 KLIEAVRLTLGSAWLFLIAAEAI------VATEGLGYRIFLVRRYLSMDVILPYVLWITI 247

Query: 565 FVLALNRFL 573
               ++  L
Sbjct: 248 LAYCMDWLL 256


>gi|121599597|ref|YP_993010.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|126454363|ref|YP_001066146.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242316273|ref|ZP_04815289.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|121228407|gb|ABM50925.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|126228005|gb|ABN91545.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|242139512|gb|EES25914.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
          Length = 323

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 116 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 175

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 176 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 227

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 228 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 285

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 286 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 316



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 52  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 111

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 112 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 168

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 169 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 224

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 225 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 283 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 317


>gi|86357663|ref|YP_469555.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rhizobium
           etli CFN 42]
 gi|86281765|gb|ABC90828.1| probable nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 280

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 94/251 (37%), Gaps = 19/251 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-------------QDVLY 378
           +Q  ++ R   +       ++    + + W +   +     Y              D   
Sbjct: 12  VQTTASARRRELALRVLTPLLVIACLVLVWYAYVRLSGVPPYILPGPAAVASTFVTDWGT 71

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +T    ++ +++A +  +   I++     I     P A +L   P     PL++
Sbjct: 72  LAPALWVTTKITLISLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLIL 131

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                Y  +  + L +       + IL N++ G  +  ++   +   +  + W+   ++ 
Sbjct: 132 I----YAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLFLK 187

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY++TG     G A  A++V+E A+          L   + E+  + + P +   
Sbjct: 188 LPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAA 245

Query: 559 VLIMCCFVLAL 569
           +L++    +A+
Sbjct: 246 LLMLSLLGVAI 256



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++ R+   +  +   VLV     + L G+    +P           D  +L      TT 
Sbjct: 23  LALRVLTPLLVIACLVLVW-YAYVRLSGVPPYILPGPAAVASTFVTDWGTLAPALWVTTK 81

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L +++++L+    +A    +SR + +   P+  I+Q  PI+      ++Y        
Sbjct: 82  ITLISLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIY-------- 133

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               ++A +   F    + +  +M Q L ++  +L  +   +  S WQ   +L +P + P
Sbjct: 134 APSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLFLKLPAAQP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  + +         V +E             +   +  A    ++  +  A+L +  
Sbjct: 194 YFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSL 251

Query: 251 VIFLY 255
           +    
Sbjct: 252 LGVAI 256


>gi|260430437|ref|ZP_05784410.1| putative binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260418466|gb|EEX11723.1| putative binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 251

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 18/248 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMV 77
           ++   L   I   +L   +    P+D++  +   L           +A  T LR+L+A  
Sbjct: 8   VVGIGLWWTITTFVLVQPRLFPPPQDVLAELLRILSNDGPLGPTYAHAGATLLRLLTAWS 67

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+ +   +   LA + R +   +   + I  S+P + ++   +V F       V    L 
Sbjct: 68  IAFVIGTLLGVLAGRRRLVFDFMANPVWIAMSVPSVVWVFILLVLFGIENIVPVSALVLL 127

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               +F            + +  I +DL E+  S+ + GWQ+     +P     +V N  
Sbjct: 128 LSAPVF--------LGTAEGVRAISKDLLEMCDSYHVRGWQRLTGFYLPSIASYMVANAR 179

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S + G   V+ +E+I + +      G+G  +A       +  I+   + +  V    D 
Sbjct: 180 VSFAYGIRIVLIAEVIGLPN------GVGILVAYWSDTLFMAPIVAWGILLTAVGMAVDL 233

Query: 258 LLFRPMIV 265
           L+F P+  
Sbjct: 234 LVFGPLQR 241



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+ R++    IA +I   +G+  G R  +   +     +  + P+ V+  +++    
Sbjct: 55  AGATLLRLLTAWSIAFVIGTLLGVLAGRRRLVFDFMANPVWIAMSVPSVVWVFILLVLFG 114

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             ++ P   L LL+       +      G  A   D  E+  S+H+ GW+      LP I
Sbjct: 115 IENIVPVSALVLLLSA----PVFLGTAEGVRAISKDLLEMCDSYHVRGWQRLTGFYLPSI 170

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             Y V  A  +        +++EV    +      G+G  +A  ++      +V   +++
Sbjct: 171 ASYMVANARVSFAYGIRIVLIAEVIGLPN------GVGILVAYWSDTLFMAPIVAWGILL 224

Query: 563 CCFVLALNRFLWHPLYL 579
               +A++  ++ PL  
Sbjct: 225 TAVGMAVDLLVFGPLQR 241


>gi|229171225|ref|ZP_04298817.1| ABC transporter, permease protein [Bacillus cereus MM3]
 gi|228612242|gb|EEK69472.1| ABC transporter, permease protein [Bacillus cereus MM3]
          Length = 207

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVLIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +V+ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSVLEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   +L  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVLIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSVLEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|225550151|ref|ZP_03771111.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           118a]
 gi|225369263|gb|EEG98716.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           118a]
          Length = 478

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++  F++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVFIINLTSKFLINKLYR 476


>gi|221369178|ref|YP_002520274.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221162230|gb|ACM03201.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 281

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   +   + G   + + ++  +       Y++     T   V    ++A+ I   +G+ 
Sbjct: 48  WVSPIILPSPGETLEDLIFVGRNLLTG--GYMLEALWTTTRTVFWAFLLATGIGFSLGVL 105

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G        + P+   +   P   F PL ++ + +           L  F   + I+ +
Sbjct: 106 VGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGF----DIASKVALAAFIATFPIVVS 161

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG  +   + + +  +   +  +    + LP   P+  TG   A  G    +I  E  
Sbjct: 162 TAAGLYSASENERMLFKAMGASRLQTLLRLKLPNGLPHIFTGLKIAAVGVMAGAITGEFL 221

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             G       G GA I +S  +   P V  
Sbjct: 222 GGG------RGFGALIRQSASQMDTPRVFA 245



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 24/237 (10%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----------LDVHSLPQYAS 66
           P    +LA  +V+  I  L         P  +                 L    + +   
Sbjct: 23  PRWVAMLALAVVVVAIWDLATARMGWVSPIILPSPGETLEDLIFVGRNLLTGGYMLEALW 82

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TT  +  A +++    F    L  +++     ++P L  + ++P + F    + +    
Sbjct: 83  TTTRTVFWAFLLATGIGFSLGVLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGFD 142

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV  A   A F         +  S    L +   +   + ++   S  Q    L +P
Sbjct: 143 IASKVALAAFIATF--------PIVVSTAAGLYSASENERMLFKAMGASRLQTLLRLKLP 194

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +P +   + ++  G     +  E +  G       G G+ I  +  + D   +  
Sbjct: 195 NGLPHIFTGLKIAAVGVMAGAITGEFLGGG------RGFGALIRQSASQMDTPRVFA 245


>gi|126735363|ref|ZP_01751109.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Roseobacter sp. CCS2]
 gi|126715918|gb|EBA12783.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Roseobacter sp. CCS2]
          Length = 250

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 84/234 (35%), Gaps = 15/234 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +  +++  ++   I + L GI    +P     +  +  +   L      T     
Sbjct: 3   RGVPAVLSVVSAFVIWE-IYVRLSGISPLMLPAPTRVLDQMVQNRVLLWDNTLPTLTATF 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   +SL   F  + +      +   L PI  + Q++P++      V++F      KV+ 
Sbjct: 62  AGFALSLTVAFGLSIMLDFMPHVRRALFPIFVVSQTLPLVAIAPLVVLWFGFDLTPKVLL 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L   F         M  ++     +   ++E++ RS   +  Q F     P +MP   
Sbjct: 122 VALVTFF--------PMLVALVDGYASTDPEIEDLMRSMGATRGQIFRAARFPSAMPYFF 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             + +S++      + +E +          G+G  I  A        +L A++ 
Sbjct: 174 AGLRISITYAVVAAIFAEYVG------ARAGLGIVILNAKNSFRPDIVLAAVVI 221



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+        ++  +   + I + F PH+   + P   +    P     PLVV    +  
Sbjct: 56  TLTATFAGFALSLTVAFGLSIMLDFMPHVRRALFPIFVVSQTLPLVAIAPLVVLWFGF-- 113

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+   T + +L  ++ G ++   + +++  S   T  + +R    P   PY
Sbjct: 114 --DLTPKVLLVALVTFFPMLVALVDGYASTDPEIEDLMRSMGATRGQIFRAARFPSAMPY 171

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +  G   +   A  A+I +E            GLG  I  +      P++VL  +++ 
Sbjct: 172 FFAGLRISITYAVVAAIFAEYVG------ARAGLGIVILNAKNSFR-PDIVLAAVVIS 222


>gi|330950080|gb|EGH50340.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 244

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q ++ +  R+   + IS L        A      G  L P+L ++  +P L  L    
Sbjct: 44  LWQDSASSLQRLAIGLGISALLGLCLGIAAGILPLCGATLSPLLTVLSMVPPLAILPILF 103

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q    IP +L   +++   S W   
Sbjct: 104 IVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLI 155

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 156 LRVILPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 209

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +L D  L
Sbjct: 210 ILPYVVWITLLAWLMDWGL 228



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 48  SASSLQRLAIGLGISALLGLCLGIAAGILPLCGATLSPLLTVLSMVPPLAILPILFIVFG 107

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     +ILP +
Sbjct: 108 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQL 163

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 164 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 217

Query: 563 CCFVLALN 570
                 ++
Sbjct: 218 TLLAWLMD 225


>gi|225164830|ref|ZP_03727055.1| putative ABC-type sulfonate import system, permease component
           [Opitutaceae bacterium TAV2]
 gi|224800561|gb|EEG18932.1| putative ABC-type sulfonate import system, permease component
           [Opitutaceae bacterium TAV2]
          Length = 280

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 74/195 (37%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +++ R+ + + +A +   P+G+ +G+   +     P  Q+LA  P   + PL +
Sbjct: 82  LVRHIGVSLLRLSLGLGLAILTAFPIGVLMGWNIFVRKHALPLFQILAPVPPPAWVPLTI 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +           + L+  G  + ILFN   G       +   A  F  + +   R + 
Sbjct: 142 VVLGVG----LPMQTFLIFLGAFYPILFNTYQGVKDTDPRYLASARVFGASEFTLIRKVY 197

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +       + G            I++E+      H   +G+G  + ES E      +V+ 
Sbjct: 198 VWHALGSVIMGVKIGIALGLVMLIIAEM------HGGNSGIGYLLVESKEYFQIDRMVVA 251

Query: 559 VLIMCCFVLALNRFL 573
           ++++      L   +
Sbjct: 252 MVLLGALGWFLIEVM 266



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  +       L    L ++   + LR+   + +++L  F    L   +  +    +P
Sbjct: 64  PPPSRVAVAFWELLTHKDLVRHIGVSLLRLSLGLGLAILTAFPIGVLMGWNIFVRKHALP 123

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  I+  +P   ++  T+V      P +         F IF    + + F+ YQ + +  
Sbjct: 124 LFQILAPVPPPAWVPLTIVVLGVGLPMQT--------FLIFLGAFYPILFNTYQGVKDTD 175

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                 +R F  S +     + V  ++  ++  + + ++ G   ++ +EM          
Sbjct: 176 PRYLASARVFGASEFTLIRKVYVWHALGSVIMGVKIGIALGLVMLIIAEM------HGGN 229

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            GIG  +  + +   +  ++ AM+ +  + +   +++
Sbjct: 230 SGIGYLLVESKEYFQIDRMVVAMVLLGALGWFLIEVM 266


>gi|170739727|ref|YP_001768382.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168194001|gb|ACA15948.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 260

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   V+     ++  I  G        +++   P+ +   A P  V  P+        
Sbjct: 65  ITLQETVLAFAFGALGGIAFGFLFARNALLAAVFDPYIKAANALPRVVLAPIFALWFGLG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F     + FNV  G           A    +      R++  P    
Sbjct: 125 IWSKVALGFTLVFFI----VFFNVYQGVREVSPVVLANARMLGLNERGLLRHVYWPSALT 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   TA G A   ++V E          + GLG  I E+        V  G+LI+  
Sbjct: 181 WMFSSLHTAVGFALVGAVVGEYLG------SSAGLGYKIHEAESVFDVTGVFAGMLILTV 234

Query: 565 FVLALNR---------FLWHP 576
           FV+ ++           +W P
Sbjct: 235 FVIVIDAAVTLIERRLLVWRP 255



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P D++      +    +  +   T    + A     L    +  L A++  L  V  P
Sbjct: 41  STPVDVLKRTWAEMSNPEIWGHLWITLQETVLAFAFGALGGIAFGFLFARNALLAAVFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +    ++P +       ++F      KV        F +F        F++YQ +  + 
Sbjct: 101 YIKAANALPRVVLAPIFALWFGLGIWSKVALGFTLVFFIVF--------FNVYQGVREVS 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +   +R   L+      ++  P ++  +  ++  ++       V  E +         
Sbjct: 153 PVVLANARMLGLNERGLLRHVYWPSALTWMFSSLHTAVGFALVGAVVGEYLGSSA----- 207

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
            G+G  I  A    D+  +   ML +   + + D    L+ R ++VW
Sbjct: 208 -GLGYKIHEAESVFDVTGVFAGMLILTVFVIVIDAAVTLIERRLLVW 253


>gi|170743816|ref|YP_001772471.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168198090|gb|ACA20037.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 244

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 14/233 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++    P  +   V        LP+    T LR+ ++ ++++    V   L  +SR    
Sbjct: 26  LRTLPSPEAVTAFVWREAQGGDLPRNVGITLLRVAASFLLAMTTGAVLGILLGRSRAADR 85

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L   L ++ + P L       ++            E AAI A+  +++ N+   M +  
Sbjct: 86  LLDTPLIVLLNTPALVITVLAYIWLGL--------TETAAILAVALNKMPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L+E++++FR        ++ +P   P  V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLQEMAQAFRFDRRTWIRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I+   +  D+ A++   L    V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGYAISYYFQLFDVAALIGYSLVFSAVMLAVDLLLLQPLDAHVRRWR 244



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 10/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     IT+ RV    ++A      +GI +G        +     +L   PA V 
Sbjct: 43  AQGGDLPRNVGITLLRVAASFLLAMTTGAVLGILLGRSRAADRLLDTPLIVLLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            L +       +   +  GA       +E+A +F      W
Sbjct: 103 TVLAYIWLGLTET----AAILAVALNKMPNVAVIMREGARGLDPGLQEMAQAFRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+++LP + P+ V  A +    AW   +V E+        R  G+G  I+   +     
Sbjct: 159 IRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG------RPNGVGYAISYYFQLFDVA 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            ++   L+    +LA++  L  PL  +  R
Sbjct: 213 ALIGYSLVFSAVMLAVDLLLLQPLDAHVRR 242


>gi|224477418|ref|YP_002635024.1| putative glycine betaine/carnitine/choline transport system
           permease [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222422025|emb|CAL28839.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 211

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 87/209 (41%), Gaps = 16/209 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q         + +++I+++       L +K+++L  V++ +  ++Q+IP L  L  
Sbjct: 10  GELLQKTGEHFYISIVSLLIAIIIAVPLGILLSKTKKLASVVLTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  D+ +   S  ++  Q
Sbjct: 70  MIPIFGVG--------KTPAIIALFIYVLLPILNNTVLGVQNINPDIRQAGISMGMTKLQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G ++   +   D 
Sbjct: 122 LMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFVFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           L I+ A + +  +  + D LL R +  W+
Sbjct: 175 LMIISAAVLVTALALIVDYLL-RVVEKWA 202



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  +V ++IA II +P+GI +     ++S +   A +L   P      +++        
Sbjct: 20  FYISIVSLLIAIIIAVPLGILLSKTKKLASVVLTVAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      D ++   S  +T  +  + + LP   P  
Sbjct: 80  PAIIALFIYVLL----PILNNTVLGVQNINPDIRQAGISMGMTKLQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +     + + ++     G       GLG ++           ++   +++    
Sbjct: 136 LGGIRLSSVYVISWATLASYVGAG-------GLGDFVFNGLNLYDPLMIISAAVLVTALA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYLL 195


>gi|77465180|ref|YP_354683.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77389598|gb|ABA80782.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 281

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 73/212 (34%), Gaps = 12/212 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W   +   + G     + ++  +       Y++     T   V    ++A+ I   +G
Sbjct: 46  MAWVSPIILPSPGETLDDLIFVGKNLLSG--GYMLEALWTTTRTVFWAFLLATGIGFSLG 103

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +G        + P+   +   P   F PL ++ + +           L  F   + I+
Sbjct: 104 VLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGF----DIASKVALAAFIATFPIV 159

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +  AG  +   + + +  +   +  +    + LP   P+  TG   A  G    +I  E
Sbjct: 160 VSTAAGLYSASENERMLFKAMGASRLQTLLRLKLPNGLPHIFTGLKIAAVGVMAGAITGE 219

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
               G       G GA I +S  +   P V  
Sbjct: 220 FLGGG------RGFGALIRQSASQMDTPRVFA 245



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 24/237 (10%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----------LDVHSLPQYAS 66
           P    +LA  +V+  I  L         P  +                 L    + +   
Sbjct: 23  PRWVAMLALAVVVVAIWDLATARMAWVSPIILPSPGETLDDLIFVGKNLLSGGYMLEALW 82

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            TT  +  A +++    F    L  +++     ++P L  + ++P + F    + +    
Sbjct: 83  TTTRTVFWAFLLATGIGFSLGVLVGETKFGERAVMPYLVAIDTMPKVAFAPLFIAWLGFD 142

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KV  A   A F         +  S    L +   +   + ++   S  Q    L +P
Sbjct: 143 IASKVALAAFIATF--------PIVVSTAAGLYSASENERMLFKAMGASRLQTLLRLKLP 194

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +P +   + ++  G     +  E +  G       G G+ I  +  + D   +  
Sbjct: 195 NGLPHIFTGLKIAAVGVMAGAITGEFLGGG------RGFGALIRQSASQMDTPRVFA 245


>gi|116493382|ref|YP_805117.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103532|gb|ABJ68675.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pediococcus pentosaceus ATCC 25745]
          Length = 210

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 76/189 (40%), Gaps = 19/189 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ + ++       L  ++ ++   ++ +  +MQ+IP L  L   +  F           
Sbjct: 26  ALALGIIVAVPLGMLLIRAPKISGFVIGLASVMQTIPALALLAMMIPIFGIG-------- 77

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              AI A+F   +  +  + Y  L ++   L + ++   ++ +Q+ W + +  ++P ++ 
Sbjct: 78  STPAIVALFIYSLLPILRNTYLGLDSVDPALVDAAKGMGMNSFQRLWKVELQLALPVIMS 137

Query: 195 NMMMSMS--GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + +S +    W  +          + I   G+G  I   +       IL   + ++ + 
Sbjct: 138 GIRLSATYVIAWTAL---------ASYIGAGGLGDLIFNGLNLYRPDLILAGSIPVIILA 188

Query: 253 FLYDQLLFR 261
            + D LL +
Sbjct: 189 LVADLLLGK 197



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 7/184 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + +  I+ +P+G+ +   P IS  +   A ++   PA     +++          + 
Sbjct: 24  AFALALGIIVAVPLGMLLIRAPKISGFVIGLASVMQTIPALALLAMMIPIFGIG----ST 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G  +      + A    +  ++    + L    P  ++G 
Sbjct: 80  PAIVALFIYSLLPILRNTYLGLDSVDPALVDAAKGMGMNSFQRLWKVELQLALPVIMSGI 139

Query: 511 ITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             +     AW A   S + + G   L   GL  Y  +    GS P ++L ++        
Sbjct: 140 RLSATYVIAWTAL-ASYIGAGGLGDLIFNGLNLYRPDLILAGSIPVIILALVADLLLGKL 198

Query: 569 LNRF 572
            ++ 
Sbjct: 199 EDKL 202


>gi|328545752|ref|YP_004305861.1| Binding-protein-dependent transporters inner membrane component
           [polymorphum gilvum SL003B-26A1]
 gi|326415492|gb|ADZ72555.1| Binding-protein-dependent transport systems inner membrane
           component [Polymorphum gilvum SL003B-26A1]
          Length = 521

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 77/559 (13%), Positives = 170/559 (30%), Gaps = 71/559 (12%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + R F  + + L  +L+  +I  L         P   + I     D    P +   T   
Sbjct: 3   AERRFAGVRNALILLLLWEVIGQLGLVAGGALPPPSDILIRLWQ-DRGDYPGHIIATLQA 61

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++  VI  +       + A S  +  +   I     ++P +       +    + P ++
Sbjct: 62  SVAGFVIGNVVAVAAGVIFALSPPMLRLFRGINIAAFALPPIAIAPILALTLSGMAP-RI 120

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             A L   F   T+ V          +       ++V R++  S WQ    +    ++P 
Sbjct: 121 TLAALGVYFVTMTATV--------IGIAQADSRAKDVVRAYGGSRWQVLRLVQFRGAVPS 172

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++        + +E    G   +    +GS        +     L+ +  +  +
Sbjct: 173 ILAGLRIAAPNAVLGAILAEFGGGGRWGLGTYLLGSL------GRGEPDRLWGIGLIATL 226

Query: 252 IFLYDQ----LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFF 306
           I         LL R ++  +    L         DS  L+           + ++ W   
Sbjct: 227 IAGLSYAGFALLSRKLLGATKAVTLNAAVPTGKGDSGPLWARIGMALASVALPFALWWAL 286

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             LS     + +T G +  +         +  ++   L         G+  G+A+     
Sbjct: 287 IKLSGAPSMIAKTPGDVFTYLFLAPSAETAQAKLLAALAQTLPITFIGMVAGLAFAFALA 346

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I++                                          P   S   P A +  
Sbjct: 347 ILSK---------------------------------------LSPRFISGFMPVALITQ 367

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL+V  +     +  LW+++ +   T +     +  G +  P   +++  ++
Sbjct: 368 TMPLVALTPLLVLILGRG-TSLTLWITISV---TFFPAFVTLAQGLALVPRSAEDLPRAY 423

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W   R + +P   PY           A    +++E  + G       G+G  + +S
Sbjct: 424 GASRWTELRMVTIPASLPYLFAATRLTVPRALLGVMIAEWLATG------RGIGNLLNQS 477

Query: 547 TEKGSFPEVVLGVLIMCCF 565
                +  ++  V  +   
Sbjct: 478 RGYLDYG-MIWSVAAVSVI 495


>gi|325970476|ref|YP_004246667.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025714|gb|ADY12473.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 199

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L    +     +  AMV + +       L+   R+LG  ++ + +I+Q+IP L  L   
Sbjct: 3   ELMHAIAEHLSIVAVAMVFATIIGIALGVLSYWKRKLGSFIISLAEIIQTIPSLALLALL 62

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F           +L    A+    +  +  + Y SL  +P  + + +R   +S  Q+
Sbjct: 63  MIIFGLG--------DLTMGVALVLYALLPIIRNTYTSLTQLPPYIIDAARGMGMSRAQR 114

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+P +   + ++       +V S  I V   +I   G+G  I   I+++++ 
Sbjct: 115 LVKVEIPLSIPMIFGGIKVA-------LVNSLSIAVMGVLIGSGGLGYIIYRGIQQRNME 167

Query: 240 AILYAMLTMLGVIFLYDQ 257
            IL   + ++ +  ++D 
Sbjct: 168 RILLGAIPVVVIALIFDW 185



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V ++ A+II I +G+   ++  + S I   A+++   P+     L++       L
Sbjct: 12  LSIVAVAMVFATIIGIALGVLSYWKRKLGSFIISLAEIIQTIPSLALLALLMIIFGLGDL 71

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      I+ N     +  P    + A    ++  +    + +P   P  
Sbjct: 72  TMGVALVLYALL----PIIRNTYTSLTQLPPYIIDAARGMGMSRAQRLVKVEIPLSIPMI 127

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   + + +++  +   G       GLG  I    ++ +   ++LG + +    
Sbjct: 128 FGGIKVALVNSLSIAVMGVLIGSG-------GLGYIIYRGIQQRNMERILLGAIPVVVIA 180

Query: 567 LALN 570
           L  +
Sbjct: 181 LIFD 184


>gi|223888776|ref|ZP_03623367.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           64b]
 gi|223885592|gb|EEF56691.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           64b]
          Length = 478

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|29375452|ref|NP_814606.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecalis V583]
 gi|227520111|ref|ZP_03950160.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX0104]
 gi|227554976|ref|ZP_03985023.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis HH22]
 gi|229548802|ref|ZP_04437527.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis ATCC 29200]
 gi|255971319|ref|ZP_05421905.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T1]
 gi|255973938|ref|ZP_05424524.1| peptide ABC transporter permease [Enterococcus faecalis T2]
 gi|256617737|ref|ZP_05474583.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256761623|ref|ZP_05502203.1| ABC transporter [Enterococcus faecalis T3]
 gi|256957274|ref|ZP_05561445.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256959992|ref|ZP_05564163.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|256964312|ref|ZP_05568483.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|257077752|ref|ZP_05572113.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|257081112|ref|ZP_05575473.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis E1Sol]
 gi|257083781|ref|ZP_05578142.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis Fly1]
 gi|257086206|ref|ZP_05580567.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|257089278|ref|ZP_05583639.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257415431|ref|ZP_05592425.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis AR01/DG]
 gi|257418462|ref|ZP_05595456.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257421113|ref|ZP_05598103.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|293383743|ref|ZP_06629650.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis R712]
 gi|293388781|ref|ZP_06633274.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis S613]
 gi|294781277|ref|ZP_06746623.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859899|ref|ZP_07105987.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307267943|ref|ZP_07549331.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307271864|ref|ZP_07553132.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307277300|ref|ZP_07558402.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278439|ref|ZP_07559514.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307286673|ref|ZP_07566759.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312901593|ref|ZP_07760865.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904424|ref|ZP_07763584.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907042|ref|ZP_07766038.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312952866|ref|ZP_07771727.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312978702|ref|ZP_07790429.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|29342912|gb|AAO80676.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecalis V583]
 gi|227072455|gb|EEI10418.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX0104]
 gi|227175885|gb|EEI56857.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis HH22]
 gi|229306031|gb|EEN72027.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis ATCC 29200]
 gi|255962337|gb|EET94813.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T1]
 gi|255966810|gb|EET97432.1| peptide ABC transporter permease [Enterococcus faecalis T2]
 gi|256597264|gb|EEU16440.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256682874|gb|EEU22569.1| ABC transporter [Enterococcus faecalis T3]
 gi|256947770|gb|EEU64402.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256950488|gb|EEU67120.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|256954808|gb|EEU71440.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|256985782|gb|EEU73084.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|256989142|gb|EEU76444.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis E1Sol]
 gi|256991811|gb|EEU79113.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis Fly1]
 gi|256994236|gb|EEU81538.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|256998090|gb|EEU84610.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257157259|gb|EEU87219.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ARO1/DG]
 gi|257160290|gb|EEU90250.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257162937|gb|EEU92897.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|291078819|gb|EFE16183.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis R712]
 gi|291081938|gb|EFE18901.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis S613]
 gi|294451613|gb|EFG20069.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295113930|emb|CBL32567.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterococcus sp. 7L76]
 gi|300850717|gb|EFK78466.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306502151|gb|EFM71435.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504945|gb|EFM74140.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306506007|gb|EFM75175.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511370|gb|EFM80372.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306515584|gb|EFM84111.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310627027|gb|EFQ10310.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629169|gb|EFQ12452.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632251|gb|EFQ15534.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311288409|gb|EFQ66965.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291314|gb|EFQ69870.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315027052|gb|EFT38984.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315032352|gb|EFT44284.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034389|gb|EFT46321.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145167|gb|EFT89183.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148024|gb|EFT92040.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315149625|gb|EFT93641.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153151|gb|EFT97167.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315155170|gb|EFT99186.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315157704|gb|EFU01721.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315163075|gb|EFU07092.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165061|gb|EFU09078.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315167872|gb|EFU11889.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315171769|gb|EFU15786.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174891|gb|EFU18908.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315574097|gb|EFU86288.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577225|gb|EFU89416.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315581754|gb|EFU93945.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|323480047|gb|ADX79486.1| glycine betaine/carnitine/choline transport protein OpuB
           [Enterococcus faecalis 62]
 gi|327534447|gb|AEA93281.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis OG1RF]
 gi|329577856|gb|EGG59277.1| choline transport system permease protein opuBB [Enterococcus
           faecalis TX1467]
          Length = 211

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 69/178 (38%), Gaps = 15/178 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+++ +           +  ++  +++ +   +Q++P L  L   +  F         
Sbjct: 24  FFALLLGVAIAVPVGVWLTRLPKVANIVIGLTSALQTVPSLALLALMIPIFGVG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +  AI A+F   +  +  + Y  + N+  +  +V++   ++  Q  + + +P +MP +
Sbjct: 78  --KTPAIIALFIYSLLPILRNTYIGMKNVDENYRDVAKGMGMTNLQSIFSVELPIAMPTI 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +  + ++      +V+A   +    + I   G+G  I   +       I    + +  
Sbjct: 136 MAGIRLAA----VYVIAWATLA---SYIGAGGLGDMIFSGLNNYQPELIFGGTIPVTI 186



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 15/172 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +++   I +PVG+W+   P +++ +      L   P+     L++            
Sbjct: 24  FFALLLGVAIAVPVGVWLTRLPKVANIVIGLTSALQTVPSLALLALMIPIFGVG----KT 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G      ++++VA    +T  +    + LP   P  + G 
Sbjct: 80  PAIIALFIYSLLPILRNTYIGMKNVDENYRDVAKGMGMTNLQSIFSVELPIAMPTIMAGI 139

Query: 511 ITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             A     AW              ++   GLG  I           +  G +
Sbjct: 140 RLAAVYVIAWATL---------ASYIGAGGLGDMIFSGLNNYQPELIFGGTI 182


>gi|217421757|ref|ZP_03453261.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|217395499|gb|EEC35517.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 313

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 106 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 165

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 166 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 218 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 275

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 276 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 306



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 42  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 101

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 102 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 158

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 159 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 215 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 272

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 273 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 307


>gi|254188718|ref|ZP_04895229.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157936397|gb|EDO92067.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 323

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 116 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 175

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 176 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 227

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 228 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 285

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 286 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 316



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 52  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 111

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 112 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 168

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 169 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 224

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 225 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 283 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 317


>gi|256840818|ref|ZP_05546326.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256738090|gb|EEU51416.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 452

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 83/236 (35%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+FR ++ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATIFRGILGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKHSNVLFQIIYPQLKPFLYSGLASAAG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    S PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFISVPELLAWTIVAVFISFFFDK 234



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T  R 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATIFRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  ILGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIKHSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASAAGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFISVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|312958227|ref|ZP_07772749.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311287493|gb|EFQ66052.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 282

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 94/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++   +                 + +   L    L    S + + ++   +I ++
Sbjct: 39  LIVLAILWEAVARYQDNDLLLPSFLQTFNALYDGLLSGELLSKVSISLVVLIKGYLIGIV 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 99  LAFALTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPLALLWFGLG--------QNSLIFV 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +   L    R++ L G +   ++ +P ++P ++  + +  +
Sbjct: 151 LVHSVLWALALNTYSGFLGVSETLRMAGRNYGLKGMRFVLFILIPAALPSILAGLKIGWA 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F 
Sbjct: 211 FAWRTLIAAELVFGATS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVENLVFD 268

Query: 262 PMIVWSNK 269
                + K
Sbjct: 269 TFERLTVK 276



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 83/268 (30%), Gaps = 13/268 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG----VAIGIAWQSIGYIVNHFTYQDV 376
             +                +  +L I W  V       + +    Q+   + +     ++
Sbjct: 19  RELPLRQRLWQQGWLRKGLILIVLAILWEAVARYQDNDLLLPSFLQTFNALYDGLLSGEL 78

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  + +  + + +     +I  ++   +             +     +    PA    PL
Sbjct: 79  LSKVSISLVVLIK---GYLIGIVLAFALTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  +G        +    ++ + G R+  +
Sbjct: 136 ALLWFGLGQNS----LIFVLVHSVLWALALNTYSGFLGVSETLRMAGRNYGLKGMRFVLF 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  + G       AW   I +E+           GLG YI ++  +    +V 
Sbjct: 192 ILIPAALPSILAGLKIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTDKVF 249

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+ ++    L +   ++        + 
Sbjct: 250 AGLAVVILIGLLVENLVFDTFERLTVKR 277


>gi|256828729|ref|YP_003157457.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
 gi|256577905|gb|ACU89041.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
          Length = 249

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 14/203 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T   +L  + +  +     A +   S  L   ++P+L + Q+IP+       V
Sbjct: 48  LLSHLGTTLTEILLGLALGTILGTGAALIMILSPLLKRWMLPVLVVSQAIPVFALAPILV 107

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       KV  A L   F + +        S Y  +     DL E++R          
Sbjct: 108 LWLGYGMASKVGMAVLIIFFPVAS--------SFYSGMQRTEPDLLELARIMGAKPLAVL 159

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P     + ++ +      VA    VVG+ V    G+G Y+  A     +  
Sbjct: 160 RTIIIPSALPAFASGLRVATA------VAPIGAVVGEWVGSSAGLGFYMLHANARMQIDV 213

Query: 241 ILYAMLTMLGVIFLYDQLLFRPM 263
           +  A+  +         L+ R +
Sbjct: 214 MFAALTVLAVTSLALYFLIDRLL 236



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 10/204 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
             V H        ++     T+  +++ + + +I+     + +   P +   + P   + 
Sbjct: 35  LPVGHALLDKFPLLLSHLGTTLTEILLGLALGTILGTGAALIMILSPLLKRWMLPVLVVS 94

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P     P++V  + Y   +      L++ F     +  +  +G      D  E+A  
Sbjct: 95  QAIPVFALAPILVLWLGYGMASKVGMAVLIIFF----PVASSFYSGMQRTEPDLLELARI 150

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                    R II+P   P + +G   A   A   ++V E          + GLG Y+  
Sbjct: 151 MGAKPLAVLRTIIIPSALPAFASGLRVATAVAPIGAVVGEWVG------SSAGLGFYMLH 204

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           +  +     +   + ++    LAL
Sbjct: 205 ANARMQIDVMFAALTVLAVTSLAL 228


>gi|269959992|ref|ZP_06174369.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835291|gb|EEZ89373.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 146

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 15/152 (9%)

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           MQ++P   +L  T+V F     G V G     IFAI            Y  +  +P +L 
Sbjct: 1   MQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFAIAAP-----IRLTYLGITKVPEELI 52

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E  ++F  S  +  + + +P ++P ++  +   +      VV + ++          G+G
Sbjct: 53  EAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALV-------GADGLG 105

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  A+   ++     A L ++ V  + D+L
Sbjct: 106 KPVVRALNTVNISQGFEAGLAIVLVAIILDRL 137



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 8/136 (5%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +  + L     L   +IF     I      G +  P +  E   +F  +  +    
Sbjct: 10  LIPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGITKVPEELIEAGKAFGASRMKLLFK 68

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G       + +  +++ +           GLG  +  +    +  +  
Sbjct: 69  VELPAALPSIMAGVTQCIMLSLSMVVIAALVG-------ADGLGKPVVRALNTVNISQGF 121

Query: 557 LGVLIMCCFVLALNRF 572
              L +    + L+R 
Sbjct: 122 EAGLAIVLVAIILDRL 137


>gi|319780636|ref|YP_004140112.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166524|gb|ADV10062.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 286

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 14/204 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T + ++S   I  +   V A +  +      ++ P + ++ + P+L  +   ++ F
Sbjct: 93  HLGYTLVELVSGFTIGAIIGLVLAAVITQFPFAEKIVAPYILLLVTTPMLALVPLLILRF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              Y  ++I   LAA   +          +       +      ++RS+  S  Q FW +
Sbjct: 153 GFGYTPRIIAVALAAGPMVM--------INAATGFRRVDSAKIALARSYGASTLQIFWKI 204

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++P ++  +M+    G    V +EM+  G       G+G+ +        +     
Sbjct: 205 RAPMALPMILVGLMIGAIFGLLTAVGAEMVGGG------FGLGNRLTTYSSMIQMPQFFA 258

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS 267
            +L +  +  L   L F     W+
Sbjct: 259 VVLILSTLGILIYVLFFLIGKKWA 282



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 69/207 (33%), Gaps = 10/207 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +  + +   +      T+  +V    I +II + +   I   P     + P+  LL  
Sbjct: 79  IAYALFDEFPLIAPHLGYTLVELVSGFTIGAIIGLVLAAVITQFPFAEKIVAPYILLLVT 138

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++    + +        + +       ++ N   G     +    +A S+ 
Sbjct: 139 TPMLALVPLLILRFGFGYT----PRIIAVALAAGPMVMINAATGFRRVDSAKIALARSYG 194

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  + +  I  P   P  + G +         ++ +E+   G       GLG  +   +
Sbjct: 195 ASTLQIFWKIRAPMALPMILVGLMIGAIFGLLTAVGAEMVGGG------FGLGNRLTTYS 248

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLW 574
                P+    VLI+    + +    +
Sbjct: 249 SMIQMPQFFAVVLILSTLGILIYVLFF 275


>gi|229587703|ref|YP_002869822.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359569|emb|CAY46410.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 282

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 94/248 (37%), Gaps = 10/248 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   ++   +    +              +   L    L    S + + ++   +I ++
Sbjct: 39  LIVLAILWEAVARYQNNDLLLPSFLQTFHALYDGLLSGELLSKVSISLVVLIKGYLIGIV 98

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F   TLA  ++    +L  +  +   +P +  L   +++F           + + IF 
Sbjct: 99  LAFALTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPLALLWFGLG--------QNSLIFV 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  S +W +  + Y     +   L    R++ L G +   ++ +P ++P ++  + +  +
Sbjct: 151 LVHSVLWALALNTYSGFLGVSETLRMAGRNYGLKGMRFVLFILIPAALPSILAGLKIGWA 210

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L+F 
Sbjct: 211 FAWRTLIAAELVFGATS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVENLVFD 268

Query: 262 PMIVWSNK 269
                + K
Sbjct: 269 TFERLTVK 276



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 83/268 (30%), Gaps = 13/268 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG----VAIGIAWQSIGYIVNHFTYQDV 376
             +                +  +L I W  V       + +    Q+   + +     ++
Sbjct: 19  RELPLRQRLWQQGWLRKGLILIVLAILWEAVARYQNNDLLLPSFLQTFHALYDGLLSGEL 78

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L  + +  + + +     +I  ++   +             +     +    PA    PL
Sbjct: 79  LSKVSISLVVLIK---GYLIGIVLAFALTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPL 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +    L  +++    W +  N  +G        +    ++ + G R+  +
Sbjct: 136 ALLWFGLGQNS----LIFVLVHSVLWALALNTYSGFLGVSETLRMAGRNYGLKGMRFVLF 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I++P   P  + G       AW   I +E+           GLG YI ++  +    +V 
Sbjct: 192 ILIPAALPSILAGLKIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTDKVF 249

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G+ ++    L +   ++        + 
Sbjct: 250 AGLAVVILIGLLVENLVFDTFERLTVKR 277


>gi|225568762|ref|ZP_03777787.1| hypothetical protein CLOHYLEM_04841 [Clostridium hylemonae DSM
           15053]
 gi|225162261|gb|EEG74880.1| hypothetical protein CLOHYLEM_04841 [Clostridium hylemonae DSM
           15053]
          Length = 511

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 68/178 (38%), Gaps = 15/178 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  +   L ++  R     + ++  + +IP       +++ F+  + G      + A+ A
Sbjct: 36  FGGLSGILISEYERASRPTLGVIGFLYTIPS-----ISMLGFLIPFSGV---GNVTAVIA 87

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  M  + +  + N+   + E ++    + +Q  + + +P +MP ++  +     
Sbjct: 88  LTVYALLPMVRATHTGITNVDAGILEAAKGMGSTRFQMLYKIKIPLAMPVIMSGIR---- 143

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V  +  +    + I   G+G  I   I   +    +   L +  +  + D +L
Sbjct: 144 ---NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTMAGSLLIAVLALVVDFIL 198



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 11/169 (6%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI I      S         L   P+      ++      ++   + L++  +      +
Sbjct: 41  GILISEYERASRPTLGVIGFLYTIPSISMLGFLIPFSGVGNVTAVIALTVYALL----PM 96

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G +       E A     T ++    I +P   P  ++G         N   ++
Sbjct: 97  VRATHTGITNVDAGILEAAKGMGSTRFQMLYKIKIPLAMPVIMSGIR-------NMVTMT 149

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +     +   GLG  I       +    + G L++    L ++  L
Sbjct: 150 IALAGIASFIGAGGLGVAIYRGITTNNTAMTMAGSLLIAVLALVVDFIL 198


>gi|207742524|ref|YP_002258916.1| abc type transporter : periplasmic glycine betaine /
           choline-binding lipoprotein and permease components
           [Ralstonia solanacearum IPO1609]
 gi|206593916|emb|CAQ60843.1| abc type transporter : periplasmic glycine betaine /
           choline-binding lipoprotein and permease components
           [Ralstonia solanacearum IPO1609]
          Length = 520

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTFVYA 87
              +         T   R    +   +  +   L +   R    + ++   ++L      
Sbjct: 287 FARVASQFLAGHGTPPARADAPVHAFSARLTDGLWRLTRRHLALVAASTGAAVLIGVPLG 346

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LAA+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +
Sbjct: 347 LLAAR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------AVPALIALTLYAL 398

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  +    L  +P  L + + +  L+  Q+   + +P ++P ++  +  +        
Sbjct: 399 LPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVILAGIKTAAVISVGTA 458

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +  I  G       G G  IA  +   D  A L A      V+ L  Q  F     W
Sbjct: 459 TIAAFIGAG-------GYGERIATGLALND-SATLLAGAIPAAVLALLVQGAFEATERW 509



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 5/180 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V      A +I +P+G+    R  I   +     +L   P+     +++  V     
Sbjct: 328 LALVAASTGAAVLIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGA 386

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +  +T  +  R + LP   P  
Sbjct: 387 VPAL---IALTLYALLPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVI 443

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  TA   +   A+I + + + G+     TGL    + +   G+ P  VL +L+   F
Sbjct: 444 LAGIKTAAVISVGTATIAAFIGAGGYGERIATGLALNDSATLLAGAIPAAVLALLVQGAF 503


>gi|298376643|ref|ZP_06986598.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_19]
 gi|298266521|gb|EFI08179.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_19]
          Length = 452

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 26/236 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFT--------------YQDVLYVIWLGCITMFRVVVLIII 396
           +V    +   WQ    I N                 +            T+ R ++ + I
Sbjct: 10  IVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRGILGMSI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +  I +         +    +P   ++ + P   F  L +       LNP   + L++
Sbjct: 70  SFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF-----LNPES-IPLMI 123

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F T + +L  N+  G          +A  FHI        II P + P+  +G  +A G
Sbjct: 124 AFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFLYSGLASATG 183

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
             W A I+ EV S         G+G+ +  +    + PE++   ++        ++
Sbjct: 184 FGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFISFFFDK 234



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 14/244 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+    I      +    +  ++ +  +       +V  +   L   S  Q    T LR 
Sbjct: 4   RKTITTIVATAILLAGWQLFAVIANQPELIPSLPRLVRTLCEWLVSGSFYQSVGATILRG 63

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  M IS +     A L A+   +  +  P+L IM+SIP++ F+   +++         +
Sbjct: 64  ILGMSISFVCAIGMAGLFARFEWVYELFRPLLAIMRSIPVISFILLALIF---------L 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   +   F +    +T ++ + + ++   L  ++R F +      + +  P   P L
Sbjct: 115 NPESIPLMIAFLTMFPLLTENLTRGILDLRPGLSIMARQFHIRRSNVLFQIIYPQLKPFL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +   GW  ++  E++          GIGS +  A     +  +L   +  + + 
Sbjct: 175 YSGLASATGFGWRAIIMGEVLS-----QCAFGIGSEMKRAQNFIAVPELLAWTIVAVFIS 229

Query: 253 FLYD 256
           F +D
Sbjct: 230 FFFD 233


>gi|110633166|ref|YP_673374.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110284150|gb|ABG62209.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 277

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +++   +  +  +     IT F V V  ++A  I + VGI +GF   ++    P   L+
Sbjct: 68  VVLSLPKFFQIRNMTLALGITAFEVAVAFVMAVAIGVAVGIALGFSRVLNQTFMPIVLLI 127

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P  VF PL +        +   +          + I+  V AG +         A S
Sbjct: 128 YATPNAVFLPLFMLLFGLGVTSKIAY----GFAHGVFPIIITVAAGVANLKPVLLASARS 183

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              + ++  R++I P + P +               I+SE+       +   G+G +   
Sbjct: 184 MGASRYQILRHVIFPHMLPNFFAAMRLGMATTLLGVILSELF------VSQAGIGHFARL 237

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +       +   +L++    + +N  L  
Sbjct: 238 FSMTFQTVNLYALILLVTTIAIIINEILRR 267



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F     I        +      ++V  +P    + ++      T   +  A V+++ 
Sbjct: 42  VIGFFAAWEIYASFFANPRFLPPISEVVLSLPKFFQIRNMTLALGITAFEVAVAFVMAVA 101

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      SR L    +PI+ ++ + P   FL   ++ F      K+       +F 
Sbjct: 102 IGVAVGIALGFSRVLNQTFMPIVLLIYATPNAVFLPLFMLLFGLGVTSKIAYGFAHGVF- 160

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++   + N+   L   +RS   S +Q   ++  P  +P     M + M+
Sbjct: 161 -------PIIITVAAGVANLKPVLLASARSMGASRYQILRHVIFPHMLPNFFAAMRLGMA 213

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                V+ SE+ V         GIG + A           LYA++ ++  I +    + R
Sbjct: 214 TTLLGVILSELFV------SQAGIGHF-ARLFSMTFQTVNLYALILLVTTIAIIINEILR 266

Query: 262 PMIVWSNKFR 271
                 +K+R
Sbjct: 267 RQEARLSKWR 276


>gi|254451362|ref|ZP_05064799.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198265768|gb|EDY90038.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 247

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VLV+    I   G+    +P  +     I      L ++A  T   +L  +V+   F F
Sbjct: 13  LVLVLWQTVIWTTGVARFILPPPVSVAQTIWESRELLAEHAVITMAEVLIGLVLGAAFGF 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A     S  +  ++ PIL   Q++P+        ++              + I     
Sbjct: 73  MSAIGLVASPTVRALVRPILVFSQAVPVFALAPILTLWLGFGL--------WSKITMTII 124

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + +T S + +L    RD   +++    S  +  WY+ VP +MPG    + ++     
Sbjct: 125 IIYFPVTSSFFDALMRTNRDWIGLAKVMGASPARIMWYIRVPAAMPGFASGLRLA----- 179

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             V A    ++G+ V    G+G  + LA        +  A++ +  +  L    + R
Sbjct: 180 -AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILLHSAVNR 235



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 77/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  V+    +          V    ++    +     ITM  V++ +++ +    
Sbjct: 13  LVLVLWQTVIWTTGVARFILPPPVSVAQTIWESRELLAEHAVITMAEVLIGLVLGAAFGF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I +   P + + ++P      A P     P++   + +   +      +++ F    
Sbjct: 73  MSAIGLVASPTVRALVRPILVFSQAVPVFALAPILTLWLGFGLWSKITMTIIIIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +          D+  +A     +  R   YI +P   P + +G   A   A   +I
Sbjct: 129 PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWYIRVPAAMPGFASGLRLAAVYAPIGAI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          + GLG  +  +  +     +   ++++    + L
Sbjct: 189 IGEWVG------ASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILL 229


>gi|167919055|ref|ZP_02506146.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
          Length = 279

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 72  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 131

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 132 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 183

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 184 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 241

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 242 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 272



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 6/161 (3%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +    P+    PL +        +    L  +++    W +  +  AG  A P   + V 
Sbjct: 119 MFNPLPSIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVG 174

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++ +TG R    I++P   P  + G   A   AW   I +E+             G YI
Sbjct: 175 RNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYI 232

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++  +     V  G+  +    L +   ++  L     + 
Sbjct: 233 FQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 273


>gi|52081548|ref|YP_080339.1| putative sulfonate transport system permease YtlD [Bacillus
           licheniformis ATCC 14580]
 gi|52004759|gb|AAU24701.1| putative sulfonate transport system permease protein YtlD [Bacillus
           licheniformis ATCC 14580]
          Length = 272

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 81/224 (36%), Gaps = 16/224 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W   +   +    W                 +     +T+F  ++  +  +++   + 
Sbjct: 49  LAWIDPLIFSSPSAVWALF------LEKMGDGSLPGHIGVTVFETILGFLAGTLLGTFLA 102

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             + + P +S  + P+  +L A P     P+++  +     +     +++ +  T   + 
Sbjct: 103 ALLWWFPRLSKILDPYLVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITTIVVY 162

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +          ++ +V  +F  T    ++ +ILP   P  ++      G +W   IV E
Sbjct: 163 TSF----QEIDENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGE 218

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   +   GLG  I    +  +F  V+L +LI+  F   +
Sbjct: 219 FL------VSAQGLGYMIIYGFQVFNFNLVMLSLLIIAVFATLM 256



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 16/216 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   SLP +   T    +   +   L     A L     RL  +L P
Sbjct: 58  SSPSAVWALFLEKMGDGSLPGHIGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDP 117

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNI 161
            L ++ ++P +      +V          IG  L +I A+     V   T  +Y S   I
Sbjct: 118 YLVVLNAMPKVALGPILIVA---------IGPSLTSIIAMGAIISVIITTIVVYTSFQEI 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +V ++F  +  + F  + +P S+P ++  + +++   W  V+  E +V       
Sbjct: 169 DENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLV------S 222

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G  I    +  +   ++ ++L +     L  Q
Sbjct: 223 AQGLGYMIIYGFQVFNFNLVMLSLLIIAVFATLMYQ 258


>gi|254452081|ref|ZP_05065518.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198266487|gb|EDY90757.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 247

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 14/237 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            VLV+    I   G+    +P  +     I      L ++A  T   +L  +V+   F F
Sbjct: 13  LVLVLWQTVIWTTGVARFILPPPVSVAQTIWESRALLAEHAVITMAEVLIGLVLGAAFGF 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A     S  +  ++ PIL   Q++P+        ++              + I     
Sbjct: 73  MSAIGLVASPTVRALVRPILVFSQAVPVFALAPILTLWLGFGL--------WSKITMTII 124

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + +T S + +L    RD   +++    S  +  WY+ VP +MPG    + ++     
Sbjct: 125 IIYFPVTSSFFDALMRTNRDWIGLAKVMGASPARIMWYIRVPAAMPGFASGLRLA----- 179

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             V A    ++G+ V    G+G  + LA        +  A++ +  +  L    + R
Sbjct: 180 -AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILLHSAVNR 235



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 77/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  V+    +          V    ++    +     ITM  V++ +++ +    
Sbjct: 13  LVLVLWQTVIWTTGVARFILPPPVSVAQTIWESRALLAEHAVITMAEVLIGLVLGAAFGF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I +   P + + ++P      A P     P++   + +   +      +++ F    
Sbjct: 73  MSAIGLVASPTVRALVRPILVFSQAVPVFALAPILTLWLGFGLWSKITMTIIIIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +          D+  +A     +  R   YI +P   P + +G   A   A   +I
Sbjct: 129 PVTSSFFDALMRTNRDWIGLAKVMGASPARIMWYIRVPAAMPGFASGLRLAAVYAPIGAI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          + GLG  +  +  +     +   ++++    + L
Sbjct: 189 IGEWVG------ASKGLGYLMLLANGRAKTDLMFAALIVLAVLTILL 229


>gi|256378901|ref|YP_003102561.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255923204|gb|ACU38715.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 258

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 12/244 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWF--CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
           P     L +      +    W+    +  V   +       +    T      +      
Sbjct: 7   PARGTALLAGLVSLAVGIAAWWTAASLPVVPDYVLPSPGELVSRAVTLFRSGGLGVHLAQ 66

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+  ++I ++  + + +       +   + P   ++   P     PL+V  +    
Sbjct: 67  TLAEVLQGVLIGTVAGVLLAVLFVRLRWLEKLLMPVIVVVQVTPKISIAPLIVLWLGLGI 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L+   T + IL NV+A     P  F +++    ++G R  R + LP   P 
Sbjct: 127 GSK----ITLIALVTFYPILVNVVAKLRGMPTAFDDLSVVLGMSGARKARVLQLPFALPA 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A  A+++ E            GLG    ++ +      V + ++++C  
Sbjct: 183 LLAGLRVGVLQAVTAAVIGEFIG------AQAGLGYLEKQAQDNDDIQVVFITLILLCLI 236

Query: 566 VLAL 569
              L
Sbjct: 237 GWVL 240



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 86/214 (40%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++V           L  + ++T   +L  ++I  +   + A L  + R L  +L+
Sbjct: 41  LPSPGELVSRAVTLFRSGGLGVHLAQTLAEVLQGVLIGTVAGVLLAVLFVRLRWLEKLLM 100

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ ++Q  P +      V++       K        I  I     + +  ++   L  +
Sbjct: 101 PVIVVVQVTPKISIAPLIVLWLGLGIGSK--------ITLIALVTFYPILVNVVAKLRGM 152

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P   +++S    +SG +K   L +PF++P L+  + + +      + A    V+G+ +  
Sbjct: 153 PTAFDDLSVVLGMSGARKARVLQLPFALPALLAGLRVGV------LQAVTAAVIGEFIGA 206

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G     A    D+  +   ++ +  + ++ 
Sbjct: 207 QAGLGYLEKQAQDNDDIQVVFITLILLCLIGWVL 240


>gi|119382790|ref|YP_913846.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119372557|gb|ABL68150.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 243

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 85/238 (35%), Gaps = 10/238 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W  ++    +          V    + +   +      T+  VV+   + S +   + 
Sbjct: 13  LLWQGIIWLAGMPPFLLPSPLRVLDALWLNRAEIARHAGFTLTEVVLGFALGSALGAALA 72

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +GF   ++  ++P        P     P++   +  + + P + +++L++F   + + 
Sbjct: 73  VAMGFSQKLTGVLRPILTFSQTIPVFALAPILTLWLG-FGMAPKIAMTVLIVF---FPVA 128

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              + G    P    ++A     +  R  R++ +P   P   TG   A   A   +++ E
Sbjct: 129 SAFLDGLMRTPQAALDLAQVMGASRIRIMRHLRIPAALPSLATGLRLAAVYAPIGAVIGE 188

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                       GLGA +  +  +     V   +L++    +   R +   L+    R
Sbjct: 189 WVGG------ARGLGALMIHANGRMKTDLVFAALLVLSVMTVIFARAVAIALHRLLRR 240



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 92/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  VL++    I L G+    +P  +  +  + L+   + ++A  T   ++    +   
Sbjct: 7   LIVTVLLLWQGIIWLAGMPPFLLPSPLRVLDALWLNRAEIARHAGFTLTEVVLGFALGSA 66

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A     S++L  VL PIL   Q+IP+        ++       K+    L   F 
Sbjct: 67  LGAALAVAMGFSQKLTGVLRPILTFSQTIPVFALAPILTLWLGFGMAPKIAMTVLIVFFP 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + ++            L   P+   ++++    S  +   +L +P ++P L   + ++  
Sbjct: 127 VASA--------FLDGLMRTPQAALDLAQVMGASRIRIMRHLRIPAALPSLATGLRLA-- 176

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V A    V+G+ V    G+G+ +  A        +  A+L +  +  ++ + +
Sbjct: 177 ----AVYAPIGAVIGEWVGGARGLGALMIHANGRMKTDLVFAALLVLSVMTVIFARAV 230


>gi|229125874|ref|ZP_04254899.1| ABC transporter, permease protein [Bacillus cereus BDRD-Cer4]
 gi|228657532|gb|EEL13345.1| ABC transporter, permease protein [Bacillus cereus BDRD-Cer4]
          Length = 207

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      D  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKDMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +D+ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKDMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|157694458|ref|YP_001488920.1| glycine betaine/L-proline ABC transporter binding protein [Bacillus
           pumilus SAFR-032]
 gi|157683216|gb|ABV64360.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Bacillus pumilus SAFR-032]
          Length = 505

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 71/192 (36%), Gaps = 20/192 (10%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           L A+ +++L          +  +L   ++ +  ++Q+IP        
Sbjct: 14  QLGHALLEHIQISLIALFLAILIAIPLGIYLTRVPKLAEWVIGVTAVLQTIPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ AI A+    +  +  + Y  +  +   L E + +  ++  ++
Sbjct: 67  -LALLGLLIPLVGIGQVPAIIALVVYALLPILRNTYTGIQEVDPSLREAALAMGMNHRKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P +MP ++  +   M           +++VG   +    IG+    ++    + 
Sbjct: 126 LLKVELPLAMPVIMAGIRTGM-----------VLIVGTATLAAL-IGAGGLGSLILLGID 173

Query: 240 AILYAMLTMLGV 251
               A++ +  +
Sbjct: 174 RNDMALIVIGAI 185



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + +A +I IP+GI++   P ++  +     +L   P+     L++  V    +   +
Sbjct: 27  LIALFLAILIAIPLGIYLTRVPKLAEWVIGVTAVLQTIPSLALLGLLIPLVGIGQVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G        +E A +  +   +    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIQEVDPSLREAALAMGMNHRKRLLKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            T        + ++ +   G +               ++     +V+G +
Sbjct: 143 RTGMVLIVGTATLAALIGAGGLGSLIL-------LGIDRNDMALIVIGAI 185


>gi|148269575|ref|YP_001244035.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
 gi|147735119|gb|ABQ46459.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
          Length = 250

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
               +  I       + +  +P+    ++        L  ++  T L   S +VI L+  
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L    + +  V+ PIL I Q+IPI+      +++F      K        I  + 
Sbjct: 71  MGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK--------IGIVA 122

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +  +    I +D  ++ +  + +  Q + YL +P ++P ++  + +S    
Sbjct: 123 FVTLFPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKIS---A 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            + VV++   V+G+ +    G+G Y+  A+       + 
Sbjct: 180 TYAVVSA---VIGEWLGAEKGLGIYMIRAMNTFRADRLF 215



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 71/215 (33%), Gaps = 16/215 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           W   +  + +    +   Y++                ++     T+      ++I  ++ 
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + +     +   + P   +  A P     PLV+                ++ F T 
Sbjct: 71  MGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK----IGIVAFVTL 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N + G      D  ++      T  + +RY++LP   PY ++G   +   A  ++
Sbjct: 127 FPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKISATYAVVSA 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ E            GLG Y+  +        + 
Sbjct: 187 VIGEWLGAEK------GLGIYMIRAMNTFRADRLF 215


>gi|228913126|ref|ZP_04076765.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925632|ref|ZP_04088721.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944185|ref|ZP_04106564.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089499|ref|ZP_04220768.1| ABC transporter, permease protein [Bacillus cereus Rock3-42]
 gi|229120038|ref|ZP_04249293.1| ABC transporter, permease protein [Bacillus cereus 95/8201]
 gi|229137239|ref|ZP_04265856.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
 gi|229182765|ref|ZP_04310005.1| ABC transporter, permease protein [Bacillus cereus BGSC 6E1]
 gi|228600738|gb|EEK58318.1| ABC transporter, permease protein [Bacillus cereus BGSC 6E1]
 gi|228646234|gb|EEL02451.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26]
 gi|228663504|gb|EEL19089.1| ABC transporter, permease protein [Bacillus cereus 95/8201]
 gi|228693806|gb|EEL47500.1| ABC transporter, permease protein [Bacillus cereus Rock3-42]
 gi|228815574|gb|EEM61816.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228834110|gb|EEM79658.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846531|gb|EEM91544.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 207

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|42523496|ref|NP_968876.1| ABC-type nitrate transporter, permease protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39575702|emb|CAE79869.1| ABC-type nitrate transporter, permease protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 253

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 89/232 (38%), Gaps = 16/232 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P     +   L + I+      + ET +P   + +  +             T + +
Sbjct: 2   KRFLPAFISFIVLTLSLEILVRGGW-VSETLLPSPSMIVATLQELRADFAVAFKETLINV 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+ + +S+L   + + + + S  L   ++P     Q++PI+      V+YF    P    
Sbjct: 61  LAGLGLSVLVGGLISFVFSMSETLKRAILPFAVFFQTVPIIAIAPLLVIYFGFGAP---- 116

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I + F   ++ +  +    L ++    +++ R +R +  Q  W L +P +   +
Sbjct: 117 ----TVIASSFIVSLFPIIANTLMGLESVSESQKDLFRIYRATRMQTLWKLKLPHAYSYI 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
              + +S        +A E +  G       G+G+ I  A  +Q +  +  A
Sbjct: 173 YSGLKISTGLSIIGAIAGEFVAGG-------GLGALIDSARTQQRVDIVFGA 217



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 11/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V+  + ++ ++   +         +   I PFA      P     PL+V    +  
Sbjct: 56  TLINVLAGLGLSVLVGGLISFVFSMSETLKRAILPFAVFFQTVPIIAIAPLLVIYFGFGA 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P +  S  ++  + + I+ N + G  +     K++   +  T  +    + LP  + Y
Sbjct: 116 --PTVIASSFIV--SLFPIIANTLMGLESVSESQKDLFRIYRATRMQTLWKLKLPHAYSY 171

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             +G   + G +   +I  E  + G       GLGA I  +  +     V   
Sbjct: 172 IYSGLKISTGLSIIGAIAGEFVAGG-------GLGALIDSARTQQRVDIVFGA 217


>gi|146282371|ref|YP_001172524.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
 gi|145570576|gb|ABP79682.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501]
          Length = 271

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 15/228 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL    + +   + +   P       L  Q  + +  R+ S + I+ +        A   
Sbjct: 44  LLPSFGQMSAAVERLAFTPDKRSGDYLFWQDTASSLKRLGSGLAIAAVAGLCLGVAAGTL 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
              G  L P+L ++  +P L  L    + F           EL+ +  I       +   
Sbjct: 104 PLFGAPLSPLLTVLSMVPPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IPR+L   +++   + W     L +P  +P L+ ++ + +   W F++A+E I
Sbjct: 156 LEQRAREIPRELLIKAQTLGANTWTLILRLVLPQLLPRLLISLRLVLGSAWLFLIAAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              D      G+G  I L  +   +  IL  +  +  + +  D  L R
Sbjct: 216 ASTD------GLGYRIFLVRRYMAMDVILPYVAWITLLAWAMDLSLRR 257



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + IA++  + +G+  G  P   + + P   +L+  P     P++      
Sbjct: 76  ASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +     W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILRLVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V  + 
Sbjct: 192 PRLLISLRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYMAMDVILPYVAWIT 245

Query: 564 CFVLALNRFLWH 575
               A++  L  
Sbjct: 246 LLAWAMDLSLRR 257


>gi|52786927|ref|YP_092756.1| YtlD [Bacillus licheniformis ATCC 14580]
 gi|319647458|ref|ZP_08001679.1| YtlD protein [Bacillus sp. BT1B_CT2]
 gi|52349429|gb|AAU42063.1| YtlD [Bacillus licheniformis ATCC 14580]
 gi|317390504|gb|EFV71310.1| YtlD protein [Bacillus sp. BT1B_CT2]
          Length = 274

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 81/224 (36%), Gaps = 16/224 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W   +   +    W                 +     +T+F  ++  +  +++   + 
Sbjct: 51  LAWIDPLIFSSPSAVWALF------LEKMGDGSLPGHIGVTVFETILGFLAGTLLGTFLA 104

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             + + P +S  + P+  +L A P     P+++  +     +     +++ +  T   + 
Sbjct: 105 ALLWWFPRLSKILDPYLVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITTIVVY 164

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +          ++ +V  +F  T    ++ +ILP   P  ++      G +W   IV E
Sbjct: 165 TSF----QEIDENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGE 220

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   +   GLG  I    +  +F  V+L +LI+  F   +
Sbjct: 221 FL------VSAQGLGYMIIYGFQVFNFNLVMLSLLIIAVFATLM 258



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 16/216 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   SLP +   T    +   +   L     A L     RL  +L P
Sbjct: 60  SSPSAVWALFLEKMGDGSLPGHIGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDP 119

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNI 161
            L ++ ++P +      +V          IG  L +I A+     V   T  +Y S   I
Sbjct: 120 YLVVLNAMPKVALGPILIVA---------IGPSLTSIIAMGAIISVIITTIVVYTSFQEI 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +V ++F  +  + F  + +P S+P ++  + +++   W  V+  E +V       
Sbjct: 171 DENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLV------S 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G  I    +  +   ++ ++L +     L  Q
Sbjct: 225 AQGLGYMIIYGFQVFNFNLVMLSLLIIAVFATLMYQ 260


>gi|87119899|ref|ZP_01075795.1| putative ABC transporter permease protein [Marinomonas sp. MED121]
 gi|86164601|gb|EAQ65870.1| putative ABC transporter permease protein [Marinomonas sp. MED121]
          Length = 253

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 88/223 (39%), Gaps = 16/223 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I      +L   ++ I          P  +   +    DV  L  +   T + ++  +V+
Sbjct: 14  IVSFAIILLWWALVAITQVPSFILPSPEKVFSRLWQLTDV--LYPHFLVTLIEIIFGVVL 71

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +    ++A L    + + + L+P+L   Q+IP+       V++F      KVI A +  
Sbjct: 72  GVSAGLIFAILMVYFKPVRLWLLPVLLFSQAIPVFAIAPILVLWFGYGIASKVIMAAVII 131

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I  +         +  L    +D  E+++S R +     + + +P ++P +     M
Sbjct: 132 FFPILMTS--------FDGLRQSSKDYLELAQSMRANRLSILFRIQLPAALPVMASGFRM 183

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           +M      VVA    ++G+ V    G+G ++  A     +  +
Sbjct: 184 AM------VVAPIGAIIGEWVGSSQGLGYFMLYANARMQVADM 220



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 74/216 (34%), Gaps = 10/216 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           VS+ + + W+ +V    +          V    +Q    +     +T+  ++  +++   
Sbjct: 15  VSFAIILLWWALVAITQVPSFILPSPEKVFSRLWQLTDVLYPHFLVTLIEIIFGVVLGVS 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             +   I + +   +   + P      A P     P++V    Y   +  +  ++++ F 
Sbjct: 75  AGLIFAILMVYFKPVRLWLLPVLLFSQAIPVFAIAPILVLWFGYGIASKVIMAAVIIFF- 133

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL     G      D+ E+A S           I LP   P   +G   A   A  
Sbjct: 134 ---PILMTSFDGLRQSSKDYLELAQSMRANRLSILFRIQLPAALPVMASGFRMAMVVAPI 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +I+ E          + GLG ++  +  +    ++
Sbjct: 191 GAIIGEWVG------SSQGLGYFMLYANARMQVADM 220


>gi|330992817|ref|ZP_08316760.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329759971|gb|EGG76472.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 253

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 85/240 (35%), Gaps = 14/240 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W+      +I          V H  +Q  + +      T   + + ++I +++  
Sbjct: 14  VLIGAWWAATRLASIPFYLLPQPPAVLHALWQQRVLLASATLTTFSEMALGLVIGTLLGS 73

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + F P +   I P   L  A PA    PL+V    +   +  +  ++++ F    
Sbjct: 74  LCALAMAFSPRLQRWIMPLLLLSQAIPAFALAPLLVLWFGFGMASKVVMATIVIFF---- 129

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +      G       + ++A +   +     R++ LP   P + +G   A   A   +I
Sbjct: 130 PVAAAFSDGLRHTDPGWMDLAHTMGASPGAILRHVRLPAAMPAFASGLRVATAIAPIGAI 189

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL----NRFLWHPLY 578
           V E          + GLG  +  +  +     +   + ++    + +    +R L   LY
Sbjct: 190 VGEWVG------ASAGLGYVMLNANARIQTDVMFAALFVLALMTVLIWTVVDRVLRRILY 243



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 82/211 (38%), Gaps = 17/211 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T   M   +VI  L   + A   A S RL   ++P+L + Q+IP        V
Sbjct: 50  LASATLTTFSEMALGLVIGTLLGSLCALAMAFSPRLQRWIMPLLLLSQAIPAFALAPLLV 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+ A +   F +  +            L +      +++ +   S     
Sbjct: 110 LWFGFGMASKVVMATIVIFFPVAAA--------FSDGLRHTDPGWMDLAHTMGASPGAIL 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQD 237
            ++ +P +MP     + ++ +      +A    +VG+ V    G+G  +  A   I+   
Sbjct: 162 RHVRLPAAMPAFASGLRVATA------IAPIGAIVGEWVGASAGLGYVMLNANARIQTDV 215

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           + A L+ +  M  +I+     + R ++ W+ 
Sbjct: 216 MFAALFVLALMTVLIWTVVDRVLRRILYWAP 246


>gi|229083677|ref|ZP_04216001.1| ABC transporter, permease protein [Bacillus cereus Rock3-44]
 gi|228699640|gb|EEL52301.1| ABC transporter, permease protein [Bacillus cereus Rock3-44]
          Length = 220

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 25  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 83

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 84  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMRATKWQVYQKVKFPAVLPY 140

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  G+  +   
Sbjct: 141 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GIAAIIVM 193

Query: 566 VLALNRFL 573
           V  L  F+
Sbjct: 194 VTLLLYFI 201



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 18  LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ R + WQ +
Sbjct: 78  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMRATKWQVY 129

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 130 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 182

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 183 RVFGIAAIIVMVTLLLYFI 201


>gi|222149610|ref|YP_002550567.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221736592|gb|ACM37555.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 285

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 92/247 (37%), Gaps = 6/247 (2%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +     E  L++     V   L + W   V    +          V    Y D   +   
Sbjct: 21  LFARHGETVLRVLIPFAVVAALVLVWHIGVTVSEVPQYILPGPLAVAKALYTDWGILGPA 80

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T    ++ + +A I  + + +++     I +   P A +L   P     PL++    
Sbjct: 81  LWVTTKITLMSLALALIGGVGIAVFLVQSKWIETAFYPIAVILQVTPVVAISPLILI--- 137

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            Y  +  + L +       + IL N++ G  +  ++   +   +  +  +   Y+ LP  
Sbjct: 138 -YAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLLNLFDLYGASRLQTLLYLKLPAS 196

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY++TG     G A  A++V+E A+          L   + ES  + + P +   + ++
Sbjct: 197 LPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLESQFRLNIPRLFAALFLL 254

Query: 563 CCFVLAL 569
            C  + +
Sbjct: 255 SCLGVVI 261



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 91/259 (35%), Gaps = 15/259 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+      + A VLV   I + +  + +  +P  +     +  D   L      TT   L
Sbjct: 31  RVLIPFAVVAALVLVWH-IGVTVSEVPQYILPGPLAVAKALYTDWGILGPALWVTTKITL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++ ++L+     A    +S+ +     PI  I+Q  P++      ++Y           
Sbjct: 90  MSLALALIGGVGIAVFLVQSKWIETAFYPIAVILQVTPVVAISPLILIY--------APS 141

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++A +   F    + +  +M Q L ++  +L  +   +  S  Q   YL +P S+P  +
Sbjct: 142 TQVALLICAFLVAFFPILSNMVQGLKSVDHNLLNLFDLYGASRLQTLLYLKLPASLPYFM 201

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM----L 249
             + +         V +E             +   +  +    ++  +  A+  +    +
Sbjct: 202 TGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLESQFRLNIPRLFAALFLLSCLGV 259

Query: 250 GVIFLYDQLLFRPMIVWSN 268
            +  +   + +  +  W  
Sbjct: 260 VIFAITSFISWLALHRWHE 278


>gi|85713470|ref|ZP_01044460.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter sp. Nb-311A]
 gi|85699374|gb|EAQ37241.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter sp. Nb-311A]
          Length = 279

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 90/257 (35%), Gaps = 13/257 (5%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----- 373
           +        PE  ++     R+   L +    ++   AI   +    Y++          
Sbjct: 6   SFAPADNEPPEEGVRTTPVARMLLPLAVLGASILVWHAIVDLYDIPPYVLPGPGLVAVTL 65

Query: 374 -QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            +D   +      T+   V     A++  I + +       +     P+A +L   P   
Sbjct: 66  LEDWPILWRSLLTTLLTTVEGFAAAAVGGIGLALLFNQSKWLEQAFLPYAIVLQVTPVIA 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL++      +L  +  + +       + +L N   G ++       +   +  +  +
Sbjct: 126 IAPLLLI-----YLPQHTAVVVCAWIVAFFPVLSNTTLGLNSVDRGLVGLFQLYGASRLQ 180

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             RY+ LP   PY   G   A G +   ++V+E+A+          L   IAES  + + 
Sbjct: 181 TLRYLKLPAALPYIFGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNI 238

Query: 553 PEVVLGVLIMCCFVLAL 569
           P +   +L++    + +
Sbjct: 239 PRMFAALLLLSVAGIVI 255



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 89/250 (35%), Gaps = 13/250 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           +    ++R + P    +L   +++    + L+ I    +P   +  V +  D   L +  
Sbjct: 19  VRTTPVARMLLP--LAVLGASILVWHAIVDLYDIPPYVLPGPGLVAVTLLEDWPILWRSL 76

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T L  +     + +     A L  +S+ L    +P   ++Q  P++      ++Y   
Sbjct: 77  LTTLLTTVEGFAAAAVGGIGLALLFNQSKWLEQAFLPYAIVLQVTPVIAIAPLLLIY--- 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 +    A +   +    + +  +    L ++ R L  + + +  S  Q   YL +
Sbjct: 134 ------LPQHTAVVVCAWIVAFFPVLSNTTLGLNSVDRGLVGLFQLYGASRLQTLRYLKL 187

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +   + ++        V +E+            +   IA +    ++  +  A+
Sbjct: 188 PAALPYIFGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAAL 245

Query: 246 LTMLGVIFLY 255
           L +     + 
Sbjct: 246 LLLSVAGIVI 255


>gi|229154142|ref|ZP_04282267.1| ABC transporter, permease protein [Bacillus cereus ATCC 4342]
 gi|228629422|gb|EEK86124.1| ABC transporter, permease protein [Bacillus cereus ATCC 4342]
          Length = 207

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQIYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQIY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|330806888|ref|YP_004351350.1| ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327374996|gb|AEA66346.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 288

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 86/215 (40%), Gaps = 10/215 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
                 +   L    L      + + +L   ++ ++  F   TLA  ++    +L  +  
Sbjct: 69  LQTASALYDGLLSGELLGKVWISLVVLLKGYLLGIVLAFGLTTLAVSTQFGRDLLSTLTS 128

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +   +P +  L   +++F           + + IF +  S +W +  +MY     +   L
Sbjct: 129 MFNPLPAIALLPLALLWFGLG--------QNSLIFVLVHSVLWALALNMYSGFLGVSETL 180

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R++ L G +   ++ +P ++P ++  + +  +  W  ++A+E++    +     G+
Sbjct: 181 RMAGRNYGLKGLRFVLFILIPAALPSILAGLKIGWAFAWRTLIAAELVFGATS--GKGGL 238

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           G YI     E     +   +  ++ +  L + L+F
Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVILIGLLVENLVF 273



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 77/224 (34%), Gaps = 9/224 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
            Q+   + +     ++L  +W+  + + +     ++  ++   +             +  
Sbjct: 69  LQTASALYDGLLSGELLGKVWISLVVLLK---GYLLGIVLAFGLTTLAVSTQFGRDLLST 125

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +    PA    PL +        +    L  +++    W +  N+ +G        +
Sbjct: 126 LTSMFNPLPAIALLPLALLWFGLGQNS----LIFVLVHSVLWALALNMYSGFLGVSETLR 181

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
               ++ + G R+  +I++P   P  + G       AW   I +E+           GLG
Sbjct: 182 MAGRNYGLKGLRFVLFILIPAALPSILAGLKIGWAFAWRTLIAAELVFGA--TSGKGGLG 239

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            YI ++  +    +V  G+ ++    L +   ++  L     + 
Sbjct: 240 WYIFQNRNELYTDKVFAGLAVVILIGLLVENLVFDSLERVTVKR 283


>gi|330989055|gb|EGH87158.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 271

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 96/269 (35%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           M L N  P    R I     F LL F   +G    L     +  +P  +     +     
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAVQMADAVKRMAF 60

Query: 60  S---------LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           +         L Q  + +  R+   + IS L        A      G  L P+L +M  +
Sbjct: 61  TADTRSGDYLLWQDTASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 71/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++++ + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  ASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|304393309|ref|ZP_07375237.1| probable ABC transporter permease protein [Ahrensia sp. R2A130]
 gi|303294316|gb|EFL88688.1| probable ABC transporter permease protein [Ahrensia sp. R2A130]
          Length = 282

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 23/253 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH------SLPQYASRTTLRMLSAMVIS 79
           + VI ++  +         P   +   P+ +          L  +A  T   ++  +++ 
Sbjct: 40  LAVIAVLVAIWWAGVAIFQPAPFILPGPVAVATTLFEQGPYLLWHAGITLTEIILGLILG 99

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +     A            ++P++   Q++P+       +++F      K+  A L   
Sbjct: 100 SVLGIATALAVNAFPAGRRFVMPVVMASQALPVFAIAPLLILWFGLGLGSKIAMATLIIY 159

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F + ++        +   L      L +++R +  S WQ      +P +MP L   + ++
Sbjct: 160 FPVASA--------LNDGLTRAQGHLIDLARLWGASPWQTLTRFRLPAAMPSLASGLRVA 211

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---D 256
                   +A    VVG+ V    GIG  I  A        +   ++ ++ ++       
Sbjct: 212 ------ATIAPIGAVVGEWVGAAGGIGFVINQANARMQTDTVFAGLVLLMIMVVALRAAV 265

Query: 257 QLLFRPMIVWSNK 269
                 ++ W+ +
Sbjct: 266 DFALDRLVHWAPR 278



 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 13/255 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L       V  +L   W+  V               V    ++   Y++W   IT+  ++
Sbjct: 34  LGAGRALAVIAVLVAIWWAGVAIFQPAPFILPGPVAVATTLFEQGPYLLWHAGITLTEII 93

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +I+ S++ I   + +   P     + P      A P     PL++        +    
Sbjct: 94  LGLILGSVLGIATALAVNAFPAGRRFVMPVVMASQALPVFAIAPLLILWFGLGLGSKIAM 153

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L++ F     +   +  G +       ++A  +  + W+      LP   P   +G  
Sbjct: 154 ATLIIYF----PVASALNDGLTRAQGHLIDLARLWGASPWQTLTRFRLPAAMPSLASGLR 209

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL-- 569
            A   A   ++V E            G+G  I ++  +     V  G++++   V+AL  
Sbjct: 210 VAATIAPIGAVVGEWVG------AAGGIGFVINQANARMQTDTVFAGLVLLMIMVVALRA 263

Query: 570 -NRFLWHPLYLYGTR 583
              F    L  +  R
Sbjct: 264 AVDFALDRLVHWAPR 278


>gi|319649866|ref|ZP_08004017.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317398446|gb|EFV79133.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 255

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 92/260 (35%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+ +     LL   +   +   L         P   + +  I+        +   T +  
Sbjct: 6   RKGWRPAAVLLLLFIAWEMAVNLAEVPAWLLPPPTEIVLEAIS-GWEGFSHHLQSTVMLS 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I  +   + A +      +   + P+L + Q++PI+      VV+F      K+I
Sbjct: 65  LLGFAIGTVIGLITAVILHLLPFIRESVYPLLILSQNVPIIVLAPLLVVWFGFGILPKLI 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +T +        P +L         S  Q FW L +P+S+P L
Sbjct: 125 VITLVCFF--------PITVAALDGFRQTPGELRHYMLMAGASKGQLFWKLELPYSLPSL 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      V SE +   +      GIG Y+ LA        +  A+  ++ + 
Sbjct: 177 FSGLKISATYSVMGAVISEWLGAKE------GIGVYMTLASSSFRTDRVFVAIFAIMLLS 230

Query: 253 FLY---DQLLFRPMIVWSNK 269
            L+     L  R +I W ++
Sbjct: 231 LLFFGGILLAERLLIKWKSR 250



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 72/239 (30%), Gaps = 10/239 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F +      V  +L I W   V    +          +                 T+   
Sbjct: 5   FRKGWRPAAVLLLLFIAWEMAVNLAEVPAWLLPPPTEIVLEAISGWEGFSHHLQSTVMLS 64

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I ++I +   + +   P I   + P   L    P  V  PL+V    +      L
Sbjct: 65  LLGFAIGTVIGLITAVILHLLPFIRESVYPLLILSQNVPIIVLAPLLVVWFGFG----IL 120

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++     + I    + G    P + +        +  + +  + LP   P   +G 
Sbjct: 121 PKLIVITLVCFFPITVAALDGFRQTPGELRHYMLMAGASKGQLFWKLELPYSLPSLFSGL 180

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +   +   +++SE            G+G Y+  ++       V + +  +    L  
Sbjct: 181 KISATYSVMGAVISEWLG------AKEGIGVYMTLASSSFRTDRVFVAIFAIMLLSLLF 233


>gi|47567202|ref|ZP_00237916.1| ABC transporter, permease protein, cysTW family [Bacillus cereus
           G9241]
 gi|47556045|gb|EAL14382.1| ABC transporter, permease protein, cysTW family [Bacillus cereus
           G9241]
          Length = 257

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    I  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIEPWILPKPTAIIQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 76  IGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 135 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|188590106|ref|YP_001921765.1| ABC transporter, permease protein [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500387|gb|ACD53523.1| ABC transporter, permease protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 266

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T +  ++   + +++   + + + + P  S  + P+  +L A P     P+
Sbjct: 65  GTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLDPYLVVLNALPKVALAPI 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V++G +   +D   +  +F  +  +  R+
Sbjct: 125 IIFWVG----NGTTAIIVIALLISIVTTIISVLSGFNEIDSDKIMLMKTFRASKLQILRH 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P +++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 181 LIFPYSIPVFISALKINVGLSWVGVIMGEFL------VAREGLGFLIVYGGQIAQLDMVM 234

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+      +   +
Sbjct: 235 MSIVILSVIAFIMYEIV 251



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +    +  +     A +         VL 
Sbjct: 48  TSTPSRMYKSLVSFYADGTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLD 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N           A I       +     S+      I
Sbjct: 108 PYLVVLNALPKVALAPIIIFWVGNG--------TTAIIVIALLISIVTTIISVLSGFNEI 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++FR S  Q   +L  P+S+P  +  + +++   W  V+      +G+ ++ 
Sbjct: 160 DSDKIMLMKTFRASKLQILRHLIFPYSIPVFISALKINVGLSWVGVI------MGEFLVA 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  + F+  +++
Sbjct: 214 REGLGFLIVYGGQIAQLDMVMMSIVILSVIAFIMYEIV 251


>gi|294101271|ref|YP_003553129.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
 gi|293616251|gb|ADE56405.1| binding-protein-dependent transport systems inner membrane
           component [Aminobacterium colombiense DSM 12261]
          Length = 248

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +   +T   +++ I  +    IP+ + +   P +     P      A P     PL++
Sbjct: 52  LAYHAAMTGIEIILGIFFSITAAIPLAVVMFVYPSVEQAFSPLLVASQAIPVFALAPLLI 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               Y   +     ++++ F     I+ N++ G  +  +D++++        ++ +RY+ 
Sbjct: 112 VWFGYGIWSKVFMAAIIIFF----PIVVNLLEGLKSCDSDYRKLFHLMGAPFFQSFRYLY 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY++ G       A   +++ E            GLG  + +S  +     V   
Sbjct: 168 WPWALPYFLAGLKVGVSVATIGAVIGEWVG------AQRGLGYLMIQSNARLRVDLVFAS 221

Query: 559 VLIMCCFVLALNRFL 573
           +L +    + L   +
Sbjct: 222 ILWLTAIGIFLWILV 236



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +A+ T + ++  +  S+      A +      +     P+L   Q+IP+       +
Sbjct: 52  LAYHAAMTGIEIILGIFFSITAAIPLAVVMFVYPSVEQAFSPLLVASQAIPVFALAPLLI 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F             + +F       + +  ++ + L +   D  ++        +Q F
Sbjct: 112 VWFGYGI--------WSKVFMAAIIIFFPIVVNLLEGLKSCDSDYRKLFHLMGAPFFQSF 163

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            YL  P+++P  +  + + +S      VA+   V+G+ V    G+G  +  +     +  
Sbjct: 164 RYLYWPWALPYFLAGLKVGVS------VATIGAVIGEWVGAQRGLGYLMIQSNARLRVDL 217

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +  ++L +  +      L+
Sbjct: 218 VFASILWLTAIGIFLWILV 236


>gi|297566508|ref|YP_003685480.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
 gi|296850957|gb|ADH63972.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
          Length = 275

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 9/199 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
             +++P  A  T L  +  + ++ +  F +A     SR     L+P +   Q++PI+   
Sbjct: 70  SPNAIPLNALVTALETVVGLALAAIVGFFFAIGIVASRAFERSLLPWIVASQTVPIIAIA 129

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV          I   + A +  F    + +T  + + L +      ++ +++  S 
Sbjct: 130 PMLVVVLGQYGVQGWIPKAIIAAYIAF----FPITIGVAKGLRSPDPLSLDLMKTYNASS 185

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ +  L  P S+P L     ++M+      + +E+     + I   GIG  +A   +  
Sbjct: 186 WQTYLKLRFPASLPYLFTAFKVAMTAALIGAIVAEI-----STISFQGIGKMLAENSRAS 240

Query: 237 DLLAILYAMLTMLGVIFLY 255
           D++A+   M+    +  L 
Sbjct: 241 DVVAMWVIMIASAFLGILL 259



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 5/207 (2%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            +G+    F       +     +T    VV + +A+I+     I I         + P+ 
Sbjct: 58  LLGFRNLMFPLNSPNAIPLNALVTALETVVGLALAAIVGFFFAIGIVASRAFERSLLPWI 117

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                 P     P++V  +  Y +   +  +++  +   + I   V  G  +      ++
Sbjct: 118 VASQTVPIIAIAPMLVVVLGQYGVQGWIPKAIIAAYIAFFPITIGVAKGLRSPDPLSLDL 177

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ + W+ +  +  P   PY  T    A   A   +IV+E+       +   G+G  
Sbjct: 178 MKTYNASSWQTYLKLRFPASLPYLFTAFKVAMTAALIGAIVAEI-----STISFQGIGKM 232

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +AE++       + + ++      + L
Sbjct: 233 LAENSRASDVVAMWVIMIASAFLGILL 259


>gi|149181230|ref|ZP_01859729.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           sp. SG-1]
 gi|148851129|gb|EDL65280.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           sp. SG-1]
          Length = 250

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 10/228 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L I W              + G I+        + +      T+  +++ + ++ I+ 
Sbjct: 15  FLLLIIWQIGASTYDKPFILPAPGGILAELWELKEILITRHLPATLLIILIGLTMSIILG 74

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + + F   +     P        P     P+ V    Y          ++ I  T 
Sbjct: 75  VSLAMAMNFSRTVERAFYPILIASQTIPIIALAPIFVLWFGYS----IWSKVVVTILITF 130

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + I  +   G  +   D +E+  +     W  +  + +P   PY+ +G   A   +   +
Sbjct: 131 FPITVSTFDGLKSVNKDLRELMLTMGAGKWAIFHNVSVPTALPYFFSGLKVAVTLSVIGA 190

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            + E            GLG +      + +   V   ++++    + L
Sbjct: 191 AIGEWLG------AEAGLGYFSRRMMTQFNGAAVFAPIVLLSIAGILL 232



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 91/238 (38%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +L+I  I    +           +      L    + ++   T L +L  + +S++
Sbjct: 13  LVFLLLIIWQIGASTYDKPFILPAPGGILAELWELKEILITRHLPATLLIILIGLTMSII 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A     SR +     PIL   Q+IPI+      V++F          +  + +  
Sbjct: 73  LGVSLAMAMNFSRTVERAFYPILIASQTIPIIALAPIFVLWFGY--------SIWSKVVV 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +T S +  L ++ +DL E+  +     W  F  + VP ++P     + ++++
Sbjct: 125 TILITFFPITVSTFDGLKSVNKDLRELMLTMGAGKWAIFHNVSVPTALPYFFSGLKVAVT 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V+ +    +G+ +    G+G +    + + +  A+   ++ +     L   L+
Sbjct: 185 LS---VIGA---AIGEWLGAEAGLGYFSRRMMTQFNGAAVFAPIVLLSIAGILLFLLV 236


>gi|320534380|ref|ZP_08034866.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133422|gb|EFW25884.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 193

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 10/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++     S++    G+ +G+       + P  Q +   PA      ++            
Sbjct: 4   IIGYTAGSVLGFFTGLLMGWSRRADYWLHPLLQTIGPVPAAS----LLPLALLLLPTTYA 59

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             + ++ FG  + +     AG  +   D+ ++A +         R + +P   P  +TG 
Sbjct: 60  SAAFIVGFGAWFPMATMTRAGVRSVRRDYIDMARTLGADELFLIRRVAVPSALPDMLTGL 119

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T  G +  A + +E+           GL  YI        +P + +G++I+  F   L 
Sbjct: 120 FTGLGTSLAALMTAEL------TGVDKGLAWYINWVKGWADYPRMYVGLVILVAFCRTLM 173

Query: 571 RFLWH 575
             L+ 
Sbjct: 174 VLLFK 178



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +       +  F    L   SRR    L P+L  +  +             + L    + 
Sbjct: 4   IIGYTAGSVLGFFTGLLMGWSRRADYWLHPLLQTIGPV--------PAASLLPLALLLLP 55

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +A F +     + M       + ++ RD  +++R+           + VP ++P +
Sbjct: 56  TTYASAAFIVGFGAWFPMATMTRAGVRSVRRDYIDMARTLGADELFLIRRVAVPSALPDM 115

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +   +      ++ +E+  V        G+  YI       D   +   ++ ++   
Sbjct: 116 LTGLFTGLGTSLAALMTAELTGVDK------GLAWYINWVKGWADYPRMYVGLVILVAFC 169

Query: 253 FLYDQLLFRP---MIVWSN 268
                LLF+    ++ W  
Sbjct: 170 RTLMVLLFKIRSSLLAWQQ 188


>gi|291619629|ref|YP_003522371.1| TauC [Pantoea ananatis LMG 20103]
 gi|291154659|gb|ADD79243.1| TauC [Pantoea ananatis LMG 20103]
 gi|327396660|dbj|BAK14081.1| taurine transport system permease protein TauC [Pantoea ananatis
           AJ13355]
          Length = 271

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 15/223 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQY-ASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+ +     D +   P       L       +  R+L  + +S L        A   
Sbjct: 44  LLPGLSQMIEAIDRMAFTPDKRSGEYLLWADTFISLSRLLMGLALSSLIGLCLGIAAGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P++ ++  +P L  L    + F           EL+ +  I       +   
Sbjct: 104 PMSRAALSPLMTVVSMVPPLAILPVLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IP +L   +++   + W     + +P  +  L+ ++ + +   W F+++SE I
Sbjct: 156 LEQRAREIPAELLIKAQTLGANSWTVVLRVVLPQLLSRLITSVRLLLGSAWLFLISSEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                     G+G  I L  +   +  I+  ++ +  + +L D
Sbjct: 216 S------ATAGLGYRIFLVRRYMAMDVIIPYVIWITLLAWLMD 252



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R+++ + ++S+I + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  FISLSRLLMGLALSSLIGLCLGIAAGVFPMSRAALSPLMTVVSMVPPLAILPVLFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +     W     ++LP + 
Sbjct: 136 DELSK----VMLIVIGITPMLARDLEQRAREIPAELLIKAQTLGANSWTVVLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +T      G AW   I SE  S       T GLG  I       +   ++  V+ + 
Sbjct: 192 SRLITSVRLLLGSAWLFLISSEAIS------ATAGLGYRIFLVRRYMAMDVIIPYVIWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|228931880|ref|ZP_04094776.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827860|gb|EEM73598.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 207

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TMQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQIYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTMQEVIIGLFFAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQIY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|17230779|ref|NP_487327.1| nitrate transport protein [Nostoc sp. PCC 7120]
 gi|17132382|dbj|BAB74986.1| nitrate transport protein [Nostoc sp. PCC 7120]
          Length = 190

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 27/196 (13%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++ ++ V  I A+I    +G  IG    +   ++   Q+  + P     PL 
Sbjct: 4   SIFLDVLTSLQKLFVGYIPAAIFGSFIGYLIGINVAVYQLMRRIFQIPNSIPPIAILPLT 63

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +++++   + W I+ N   G   F                  +R +
Sbjct: 64  LVIFQ----ESESAVAVVIFMASLWTIIINTAVGIQHFRRQNNN------------FRAV 107

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I      +           AW   I  E+       L + GLGA +  S + G+   ++ 
Sbjct: 108 IF-----HTSHALKVGIWVAWFTVIAVEML------LASKGLGALLWNSYKSGNSNYIIE 156

Query: 558 GVLIMCCFVLALNRFL 573
           G+L +      L++F+
Sbjct: 157 GILYIGIIGFLLDQFI 172



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 70/195 (35%), Gaps = 33/195 (16%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  ++    + + +F      L   +  +  ++  I  I  SIP +  L  T+V F  
Sbjct: 10  LTSLQKLFVGYIPAAIFGSFIGYLIGINVAVYQLMRRIFQIPNSIPPIAILPLTLVIFQE 69

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV-SRSFRLSGWQKFWYLG 184
                   +E A    IF + +W +  +    + +  R      +  F  S         
Sbjct: 70  --------SESAVAVVIFMASLWTIIINTAVGIQHFRRQNNNFRAVIFHTSH-------- 113

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                      + + +   WF V+A EM+      +   G+G+ +  + K  +   I+  
Sbjct: 114 ----------ALKVGIWVAWFTVIAVEML------LASKGLGALLWNSYKSGNSNYIIEG 157

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  + FL DQ +
Sbjct: 158 ILYIGIIGFLLDQFI 172


>gi|225549006|ref|ZP_03769981.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           94a]
 gi|225370232|gb|EEG99670.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           94a]
          Length = 478

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   ++    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++  F++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVFIINLTSKFLINKLYR 476


>gi|218515706|ref|ZP_03512546.1| nitrate ABC transporter, permease protein [Rhizobium etli 8C-3]
          Length = 105

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V+   RL+  + FW + +P + P +   + + +   W  +VA+EM+  G       GIG 
Sbjct: 1   VAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGF 54

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I  A     L  I+ A+  +  V F  D+L+
Sbjct: 55  FIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 86



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           VA    +    ++  I+LP   PY  TG     G +W A + +E+ + G       G+G 
Sbjct: 1   VAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGF 54

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +I ++      P++++ +  +     AL++ +
Sbjct: 55  FIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 86


>gi|187934166|ref|YP_001886821.1| ABC transporter permease [Clostridium botulinum B str. Eklund 17B]
 gi|187722319|gb|ACD23540.1| ABC transporter, permease protein [Clostridium botulinum B str.
           Eklund 17B]
          Length = 266

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T +  ++   + +++   + + + + P  S  + P+  +L A P     P+
Sbjct: 65  GTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLDPYLVVLNALPKVALAPI 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V++G +   +D   +  +F  +  +  R+
Sbjct: 125 IIFWVG----NGTTAIIVIALLISIVTTIISVLSGFNEIDSDKIMLMKTFRASKLQILRH 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P +++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 181 LIFPYSIPVFISALKINVGLSWVGVIMGEFL------VAREGLGFLIVYGGQIAQLDMVM 234

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+      +   +
Sbjct: 235 MSIIILSVIAFIMYEIV 251



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +    +  +     A +         VL 
Sbjct: 48  TSTPSRMYKSLLAFYADGTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLD 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N           A I       +     S+      I
Sbjct: 108 PYLVVLNALPKVALAPIIIFWVGNG--------TTAIIVIALLISIVTTIISVLSGFNEI 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++FR S  Q   +L  P+S+P  +  + +++   W  V+      +G+ ++ 
Sbjct: 160 DSDKIMLMKTFRASKLQILRHLIFPYSIPVFISALKINVGLSWVGVI------MGEFLVA 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  + F+  +++
Sbjct: 214 REGLGFLIVYGGQIAQLDMVMMSIIILSVIAFIMYEIV 251


>gi|191636889|ref|YP_001986055.1| Putative osmoprotectant ABC transporter; permease protein
           [Lactobacillus casei BL23]
 gi|190711191|emb|CAQ65197.1| Putative osmoprotectant ABC transporter; permease protein
           [Lactobacillus casei BL23]
 gi|327380920|gb|AEA52396.1| ABC transporter, fused inner membrane component and
           substrate-binding domain [Lactobacillus casei LC2W]
          Length = 211

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + +L       +  +  +   V++ +  ++Q++P L  L   +  F          
Sbjct: 27  IALGLGVLVAVPLGIVLTRFPKTAKVVIGLASMLQTVPSLALLALMIPIFGIG------- 79

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L AI A+F   +  +  + Y  + ++   L + ++   ++  Q    + VP +MP ++
Sbjct: 80  -KLPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTALQSIRQVEVPLAMPVIM 138

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   + +  +  
Sbjct: 139 AGVRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILAL 191

Query: 254 LYDQLLFR 261
           L D LL R
Sbjct: 192 LVDWLLGR 199



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + +  ++ +P+GI +   P  +  +   A +L   P+     L++        
Sbjct: 22  LYISAIALGLGVLVAVPLGIVLTRFPKTAKVVIGLASMLQTVPSLALLALMIPIFGIG-- 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              L   + +   +   IL N   G         + A    +T  +  R + +P   P  
Sbjct: 80  --KLPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTALQSIRQVEVPLAMPVI 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG  I           ++ G + +    
Sbjct: 138 MAGVRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILA 190

Query: 567 LALNRFLWH 575
           L ++  L  
Sbjct: 191 LLVDWLLGR 199


>gi|116493637|ref|YP_805371.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus casei ATCC 334]
 gi|227533457|ref|ZP_03963506.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239630875|ref|ZP_04673906.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065199|ref|YP_003787222.1| glycine betaine/carnitine/choline ABC transporter permease
           [Lactobacillus casei str. Zhang]
 gi|116103787|gb|ABJ68929.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus casei ATCC 334]
 gi|227188907|gb|EEI68974.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239527158|gb|EEQ66159.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300437606|gb|ADK17372.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus casei str. Zhang]
 gi|327384092|gb|AEA55566.1| ABC transporter, fused inner membrane component and
           substrate-binding domain [Lactobacillus casei BD-II]
          Length = 209

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + +L       +  +  +   V++ +  ++Q++P L  L   +  F          
Sbjct: 25  IALGLGVLVAVPLGIVLTRFPKTAKVVIGLASMLQTVPSLALLALMIPIFGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L AI A+F   +  +  + Y  + ++   L + ++   ++  Q    + VP +MP ++
Sbjct: 78  -KLPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTALQSIRQVEVPLAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   + +  +  
Sbjct: 137 AGVRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILAL 189

Query: 254 LYDQLLFR 261
           L D LL R
Sbjct: 190 LVDWLLGR 197



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + +  ++ +P+GI +   P  +  +   A +L   P+     L++        
Sbjct: 20  LYISAIALGLGVLVAVPLGIVLTRFPKTAKVVIGLASMLQTVPSLALLALMIPIFGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              L   + +   +   IL N   G         + A    +T  +  R + +P   P  
Sbjct: 78  --KLPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTALQSIRQVEVPLAMPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG  I           ++ G + +    
Sbjct: 136 MAGVRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILA 188

Query: 567 LALNRFLWH 575
           L ++  L  
Sbjct: 189 LLVDWLLGR 197


>gi|298527825|ref|ZP_07015229.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511477|gb|EFI35379.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
          Length = 214

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 80/200 (40%), Gaps = 17/200 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFT 119
           P Y       +L  M I++L     + +  +   RR    ++ + +  Q+IP L  +   
Sbjct: 17  PPYILEHLNLVLIPMCIAVLIALPTSIMLTRPAYRRFTSRIMAVFNAGQTIPPLAVIAIF 76

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +    Y          AI A+    +  +  +   ++ ++P+D++E +R   ++ W+ 
Sbjct: 77  FPFLGLGY--------APAILALSIYALLPIARNTITAISSVPQDVKEAARGMGMTPWEV 128

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P S+PG++  +  S        V + ++          G+G+ I   I      
Sbjct: 129 LRKVELPLSVPGIMTGIKTSAVLTVSTAVLAALVGG-------KGMGAVIFAGINFFQAE 181

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL   + +  +  L +++L
Sbjct: 182 LILAGTVYIGIMAVLIERML 201



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 13/186 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           V++ + IA +I +P  I +        +S+I          P      +    +   +  
Sbjct: 27  VLIPMCIAVLIALPTSIMLTRPAYRRFTSRIMAVFNAGQTIPPLAVIAIFFPFLGLGYAP 86

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L LS+  +      I  N I   S+ P D KE A    +T W   R + LP   P  +
Sbjct: 87  AILALSIYALL----PIARNTITAISSVPQDVKEAARGMGMTPWEVLRKVELPLSVPGIM 142

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           TG  T+     + ++++ +           G+GA I           ++ G + +    +
Sbjct: 143 TGIKTSAVLTVSTAVLAALVGG-------KGMGAVIFAGINFFQAELILAGTVYIGIMAV 195

Query: 568 ALNRFL 573
            + R L
Sbjct: 196 LIERML 201


>gi|224534052|ref|ZP_03674635.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           CA-11.2a]
 gi|224512751|gb|EEF83119.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           CA-11.2a]
          Length = 478

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   ++    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++  F++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVFIINLTSKFLINKLYR 476


>gi|27381311|ref|NP_772840.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354478|dbj|BAC51465.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 245

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 93/240 (38%), Gaps = 14/240 (5%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  L  G  +   P  ++ ++       +L  +   T  R+  A V+++        L  
Sbjct: 16  LAALFVGGAKLPSPPAVLTVIIAEASSGALFLHLGATLARVALAFVLAMSLGSAIGYLMG 75

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + +    +  P L ++ ++P L  +    ++        +    +  +     +      
Sbjct: 76  RVKLADRLGDPWLILLLNLPALVVIVLAYIWAGLTEAAAIAAIAINKLPTAIVT------ 129

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             + +    + R L+E++  F +  W+ F ++ +P   P +  +    +S  W  V+ +E
Sbjct: 130 --LREGTRALDRSLDEMASVFAMPRWRAFRHVVLPQLAPYIAASARSGLSLVWKIVLVAE 187

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           ++          G+G  I +A +  D   +L   LT   V+ + + +L +P    + ++R
Sbjct: 188 LLG------RPNGVGFEIGVAFQLFDTPRLLAYSLTFAAVVLVIETVLVQPFEARATRWR 241



 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 10/236 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W+     V           +           +      T+ RV +  ++A  +   +G  
Sbjct: 14  WWLAALFVGGAKLPSPPAVLTVIIAEASSGALFLHLGATLARVALAFVLAMSLGSAIGYL 73

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G          P+  LL   PA V   L               +++  +       +  
Sbjct: 74  MGRVKLADRLGDPWLILLLNLPALVVIVLAYIWAGLTEAAAIAAIAINKLPTA----IVT 129

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G  A      E+AS F +  WR +R+++LP + PY    A +     W   +V+E+ 
Sbjct: 130 LREGTRALDRSLDEMASVFAMPRWRAFRHVVLPQLAPYIAASARSGLSLVWKIVLVAELL 189

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                  R  G+G  I  + +    P ++   L     VL +   L  P     TR
Sbjct: 190 G------RPNGVGFEIGVAFQLFDTPRLLAYSLTFAAVVLVIETVLVQPFEARATR 239


>gi|89092868|ref|ZP_01165820.1| putative sulfonate ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
 gi|89082893|gb|EAR62113.1| putative sulfonate ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
          Length = 254

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 106/258 (41%), Gaps = 15/258 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  + A ++V  +I+ ++        P D++  +   L+ + L      T  R+ 
Sbjct: 7   RLADQLLAIAALMVVWWVISFIVSNPL-LPSPVDVLSSINTELNENRLISNVLATLQRVA 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            +   ++L       L     R+     P L I+ +IP L  +    ++F  +       
Sbjct: 66  ISFTFAMLLGGTLGILMGAVPRINRFFDPFLIILLNIPALVIIILLYIWFGLVE------ 119

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +AA+ A+  +++ N+  ++ +        L E++  ++ S  QK  +L  P   P  +
Sbjct: 120 --VAAVAAVIINKLPNVAVTIREGGRLFDSKLNEMANLYKFSFSQKIAHLWWPQIFPYFM 177

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 ++  W  V+  E++          G+G  + LA +  D+  IL   L  + ++ 
Sbjct: 178 VATRGGLALIWKIVLVVELLG------RSDGVGFQLHLAFQMFDVSTILAYSLVFISIVQ 231

Query: 254 LYDQLLFRPMIVWSNKFR 271
           + +  + +P+   + +++
Sbjct: 232 VIEWCILQPLDHKAQRWQ 249



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 10/259 (3%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   +L         L + W+ +   V+  +    +  + +  T  +   +I     T+ 
Sbjct: 3   QARNRLADQLLAIAALMVVWWVISFIVSNPLLPSPVDVLSSINTELNENRLISNVLATLQ 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV +    A ++   +GI +G  P I+    PF  +L   PA V   L+           
Sbjct: 63  RVAISFTFAMLLGGTLGILMGAVPRINRFFDPFLIILLNIPALVIIILLYIWFGLV---- 118

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +     +I      +   +  G   F +   E+A+ +  +  +   ++  P IFPY++ 
Sbjct: 119 EVAAVAAVIINKLPNVAVTIREGGRLFDSKLNEMANLYKFSFSQKIAHLWWPQIFPYFMV 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                    W   +V E+        R+ G+G  +  + +      ++   L+    V  
Sbjct: 179 ATRGGLALIWKIVLVVELLG------RSDGVGFQLHLAFQMFDVSTILAYSLVFISIVQV 232

Query: 569 LNRFLWHPLYLYGTRCLRL 587
           +   +  PL     R  R+
Sbjct: 233 IEWCILQPLDHKAQRWQRV 251


>gi|114763328|ref|ZP_01442752.1| probable permease of ABC transporter [Pelagibaca bermudensis
           HTCC2601]
 gi|114544126|gb|EAU47136.1| probable permease of ABC transporter [Roseovarius sp. HTCC2601]
          Length = 523

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 73/547 (13%), Positives = 170/547 (31%), Gaps = 57/547 (10%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L++ ++ ++   +      +      P  + +  +  +A     R  +  + + +  FV+
Sbjct: 16  LIVALLAVVAWEVVARLTAQSFFIAAPSAI-LAHMVDHAGL-LWRAFAVTLWAAVRGFVW 73

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             LA     L +VLVP  + + S   L      +V    +        E   +     + 
Sbjct: 74  GNLAGVLMALLVVLVPRAERLVSTLALLVFCLPLVATGPILRVLYGPGEGPQVTLAALAV 133

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
            +     +   L   P+   ++ RS+          + +P ++P LV  + ++    +  
Sbjct: 134 YYTTFLPVLVGLRAAPQGWFDLVRSYGRGRLVALREVRLPAALPYLVAGLQIAAPAAFL- 192

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                  +VG+      G+G     A++  DL A        + VI     +L    + W
Sbjct: 193 -----GAMVGEFTGAERGLGVLTVRALRALDLPATWS-----IAVIASAVSVLAFAAVGW 242

Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFH 326
           + + RL+         + +    R++ +            + +          L      
Sbjct: 243 AGR-RLDLAPPQVLLAAPLET--RQSRWRGPGEALLALVVTLVLWKGAMELFALPRFFAK 299

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
            PE+      +   +               +G   +++ +    +     L       +T
Sbjct: 300 RPEDVWAYMVSGPGAEAHR--------AKLLGAMAETLAFTAPGYLAGLALGAGLAVALT 351

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +                        P  ++   P A  L + P     PL+V  +     
Sbjct: 352 LA-----------------------PRAAALTMPVAIALRSIPIVATAPLIVWALGREAA 388

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +++++ F      L   + G +  P    ++   +    WR      LP + P +
Sbjct: 389 GTIAVVAVMIFF----PTLVACLHGLARTPRAVLDLFEVYAAGRWRRMLGAQLPAMLPAF 444

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
              A  A   A  A   +E  + G       G+GA +A       +  +   + ++    
Sbjct: 445 FASARMAIPAAILAVTTAEWLATG------RGVGALMATVASTSDYGMLWSAIALIGLVA 498

Query: 567 LALNRFL 573
           + ++  +
Sbjct: 499 VCVHGLV 505



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 15/208 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + T        +  L      A     + R   + +P+   ++SIPI+     
Sbjct: 319 AKLLGAMAETLAFTAPGYLAGLALGAGLAVALTLAPRAAALTMPVAIALRSIPIVATAPL 378

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V        G         I  +     +    +    L   PR + ++   +    W+
Sbjct: 379 IVWALGREAAG--------TIAVVAVMIFFPTLVACLHGLARTPRAVLDLFEVYAAGRWR 430

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +     +P  +P    +  M++      V  +E +  G       G+G+ +A      D 
Sbjct: 431 RMLGAQLPAMLPAFFASARMAIPAAILAVTTAEWLATG------RGVGALMATVASTSDY 484

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +L++ + ++G++ +    L   +  W
Sbjct: 485 G-MLWSAIALIGLVAVCVHGLVAALERW 511



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 74/239 (30%), Gaps = 10/239 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
              ++  +  +  +L +  + VV  +     + +    +          +     +T++ 
Sbjct: 7   RVARVPGSGLIVALLAVVAWEVVARLTAQSFFIAAPSAILAHMVDHAGLLWRAFAVTLWA 66

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            V   +  ++  + + + +   P     +   A L+   P     P++            
Sbjct: 67  AVRGFVWGNLAGVLMALLVVLVPRAERLVSTLALLVFCLPLVATGPILRVLYGPGEGPQV 126

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              +L + + T   +L     G  A P  + ++  S+        R + LP   PY V G
Sbjct: 127 TLAALAVYYTTFLPVL----VGLRAAPQGWFDLVRSYGRGRLVALREVRLPAALPYLVAG 182

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
              A   A+  ++V E            GLG     +      P      +I     + 
Sbjct: 183 LQIAAPAAFLGAMVGEF------TGAERGLGVLTVRALRALDLPATWSIAVIASAVSVL 235


>gi|51891896|ref|YP_074587.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51855585|dbj|BAD39743.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 258

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 74/233 (31%), Gaps = 11/233 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + W               +              ++    +T  R +    +A ++    G
Sbjct: 20  VAWHLAARRYPPWAVPTPVDVARELVRLAGEGALLQAVAVTTVRTLSGFGLAVLLGGVSG 79

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +  G    +   + P    +   P      + +         P   +++ ++      I+
Sbjct: 80  LLAGLLRPLGQALAPVVTAVQGVPPVALIIVALLWFDANSTAPVFTIAVAVL-----PII 134

Query: 466 FNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           F     G  +      E+A+ F          + LP +  Y     ++  G AW  ++++
Sbjct: 135 FAAALEGTRSVDRGLIEMATVFRTPRRMLVTEVYLPHLLSYLFPALVSGLGLAWKVALLA 194

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           E+ +        +G+GA +  +    +   +   + ++   +L +   +  PL
Sbjct: 195 ELMAGSR-----SGMGAGLGAARVNLNVAGMFAWIAVVVILLLVMENLVLRPL 242



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 92/224 (41%), Gaps = 13/224 (5%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
                P D+   +       +L Q  + TT+R LS   +++L   V   LA   R LG  
Sbjct: 32  WAVPTPVDVARELVRLAGEGALLQAVAVTTVRTLSGFGLAVLLGGVSGLLAGLLRPLGQA 91

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P++  +Q +P +  +   +++F       V    +A +  IF + +        +   
Sbjct: 92  LAPVVTAVQGVPPVALIIVALLWFDANSTAPVFTIAVAVLPIIFAAAL--------EGTR 143

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++ R L E++  FR         + +P  +  L   ++  +   W   + +E++    + 
Sbjct: 144 SVDRGLIEMATVFRTPRRMLVTEVYLPHLLSYLFPALVSGLGLAWKVALLAELMAGSRS- 202

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
               G+G+ +  A    ++  +   +  ++ ++ + + L+ RP+
Sbjct: 203 ----GMGAGLGAARVNLNVAGMFAWIAVVVILLLVMENLVLRPL 242


>gi|322383296|ref|ZP_08057096.1| glycine betaine/carnitine/choline/choline sulfate ABC
           transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152416|gb|EFX45215.1| glycine betaine/carnitine/choline/choline sulfate ABC
           transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 185

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +   +  +L+       LAA+ +RL  V++ I +I+Q  P L  L   ++ F   +   
Sbjct: 1   MVFIGIFSALVVGIPLGMLAARRKRLAPVIMTIGNILQVFPSLAMLVLLMIVFGLGFKTV 60

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           VIG        +F   +  +  + Y  L  +   + E  R   +S  Q  + + +P S+P
Sbjct: 61  VIG--------LFLYSLMPIIRNTYVGLKQVDPSITEAGRGVGMSSTQLLFKVQLPLSLP 112

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            ++  + ++          + ++  G       G+G  I   I   +
Sbjct: 113 FIMTGIRVAAVIAIGVATIAPLVGGG-------GLGREIYSGINMDN 152



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 4/142 (2%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + I  A ++ IP+G+    R  ++  I     +L  FP+     L++           
Sbjct: 2   VFIGIFSALVVGIPLGMLAARRKRLAPVIMTIGNILQVFPSLAMLVLLMIVFGLGFKTVV 61

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L       +   I+ N   G         E      ++  +    + LP   P+ +TG
Sbjct: 62  IGL----FLYSLMPIIRNTYVGLKQVDPSITEAGRGVGMSSTQLLFKVQLPLSLPFIMTG 117

Query: 510 AITACGGAWNASIVSEVASWGH 531
              A   A   + ++ +   G 
Sbjct: 118 IRVAAVIAIGVATIAPLVGGGG 139


>gi|76811495|ref|YP_333431.1| permease [Burkholderia pseudomallei 1710b]
 gi|254197270|ref|ZP_04903692.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|254259471|ref|ZP_04950525.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|76580948|gb|ABA50423.1| permease [Burkholderia pseudomallei 1710b]
 gi|169654011|gb|EDS86704.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|254218160|gb|EET07544.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 323

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 116 GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 175

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 176 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 227

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 228 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 285

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 286 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 316



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 52  AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 111

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 112 GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 168

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 169 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 224

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 225 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 282

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 283 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 317


>gi|226321192|ref|ZP_03796729.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           29805]
 gi|226233389|gb|EEH32133.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           29805]
          Length = 478

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   ++    IS+        + A+   ++    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|163793176|ref|ZP_02187152.1| ATP-binding protein of ABC transporter [alpha proteobacterium
           BAL199]
 gi|159181822|gb|EDP66334.1| ATP-binding protein of ABC transporter [alpha proteobacterium
           BAL199]
          Length = 285

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V      D   +     +T+   V+ +++A+   + + +       +     P+A +L 
Sbjct: 65  LVLDSLVNDWETLWPSLLVTLEITVLALVVATFGGLLLAVLFTQSKWVELSFFPYAVVLQ 124

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++  V   H    +   ++      + IL N   G ++   +   +   +
Sbjct: 125 VTPVIAIAPLILIYVDNVHAALLICAWIV----AFFPILSNTTLGLNSADRNLLALYRLY 180

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+  RY+ LP   PY++ G   A G A   +IV+E A+       ++GL   I ES
Sbjct: 181 GATRWQTLRYLRLPSAMPYFLAGLRIAGGLALIGAIVAEFAAGSAGT--SSGLAYRILES 238

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             +   P +   + ++    + +
Sbjct: 239 GYRLEIPRMFAALFLISLTGIVI 261



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 95/244 (38%), Gaps = 20/244 (8%)

Query: 26  VLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            LV+G+I +          GI    +P   + +  +  D  +L      T    + A+V+
Sbjct: 35  PLVVGLIALAAWDLIVRVNGIPPYILPGPALVLDSLVNDWETLWPSLLVTLEITVLALVV 94

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +     + A L  +S+ + +   P   ++Q  P++      ++Y  N++   +I A + A
Sbjct: 95  ATFGGLLLAVLFTQSKWVELSFFPYAVVLQVTPVIAIAPLILIYVDNVHAALLICAWIVA 154

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I +        +    L +  R+L  + R +  + WQ   YL +P +MP  +  + +
Sbjct: 155 FFPILS--------NTTLGLNSADRNLLALYRLYGATRWQTLRYLRLPSAMPYFLAGLRI 206

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVIFLY 255
           +        + +E            G+   I  +    ++  +  A+  +     VIFL 
Sbjct: 207 AGGLALIGAIVAEFAAGSAGTSS--GLAYRILESGYRLEIPRMFAALFLISLTGIVIFLM 264

Query: 256 DQLL 259
             LL
Sbjct: 265 FTLL 268


>gi|16800534|ref|NP_470802.1| hypothetical protein lin1466 [Listeria innocua Clip11262]
 gi|16413939|emb|CAC96697.1| opuCB [Listeria innocua Clip11262]
          Length = 218

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPVGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIINVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALVVEFALGK 200



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 65/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +PVGI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPVGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIINVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LVVEFALGKLEYRLTPKAIR 211


>gi|170741766|ref|YP_001770421.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196040|gb|ACA17987.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 257

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 96/257 (37%), Gaps = 22/257 (8%)

Query: 23  LAFVLVIGIINI-----LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           LA ++++G         +  G+ +  +PR    +  +      L  +  +T    +   V
Sbjct: 11  LALLMILGFFAAWEVLCVALGVSDLVLPRPSQILATLVARAPVLWPHMLQTLGTTMLGFV 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + +L   V   +   SR       P+L    SIP +  +   V++F +          + 
Sbjct: 71  LGVLTGLVIGAVIGVSRLAYDTAYPLLIGFSSIPKVAVVPIFVLWFGSG--------TVP 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+        + +  ++   L     +LE+V ++   S     W +G+P +MP    ++ 
Sbjct: 123 AVLTSLVICFFPIVVNIATGLATTEPELEDVLKALGASKLDILWNVGLPRTMPFFFASLK 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256
           ++++  +   V SE +          GIG+ +  A    D+      +  + G+      
Sbjct: 183 VAVTYAFVGTVLSETVASN------RGIGNVMMAASSNFDVPLAFAGLFILAGLGIALYA 236

Query: 257 --QLLFRPMIVWSNKFR 271
              L+   +  W+ + R
Sbjct: 237 AFSLVEARVTGWATRKR 253



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+   ++  ++  +  + +G  IG          P     ++ P     P+ V    
Sbjct: 58  MLQTLGTTMLGFVLGVLTGLVIGAVIGVSRLAYDTAYPLLIGFSSIPKVAVVPIFVLWFG 117

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              + P +  SL++ F   + I+ N+  G +    + ++V  +   +       + LP  
Sbjct: 118 SGTV-PAVLTSLVICF---FPIVVNIATGLATTEPELEDVLKALGASKLDILWNVGLPRT 173

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P++      A   A+  +++SE  +         G+G  +  ++     P    G+ I+
Sbjct: 174 MPFFFASLKVAVTYAFVGTVLSETVA------SNRGIGNVMMAASSNFDVPLAFAGLFIL 227

Query: 563 CCFVLAL 569
               +AL
Sbjct: 228 AGLGIAL 234


>gi|13021750|gb|AAK11546.1| aliphatic sulfonate transport permease protein SsuBAC-like protein
           [Brucella abortus]
          Length = 190

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 6/113 (5%)

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +   +L+ FGT    +                +  SF ++ W   R I+LPG FP  +
Sbjct: 84  DEMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAIL 143

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           +G   +   A    + +E+           G+G+YI E+       ++  GV 
Sbjct: 144 SGLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGVA 190



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E++    I          + Y ++ N+ R L  + +SF LS W     + +P + P ++ 
Sbjct: 85  EMSKYMLIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILS 144

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            + +S+S     +VA+EM+          G+GSYI  A    DL  +   +
Sbjct: 145 GLRVSISIAIILLVAAEMLG------AQYGVGSYILEAGSLYDLEKLFAGV 189


>gi|251779113|ref|ZP_04822033.1| ABC transporter, permease protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083428|gb|EES49318.1| ABC transporter, permease protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 266

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 79/197 (40%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T +  ++   + +++   + + + + P  S  + P+  +L A P     P+
Sbjct: 65  GTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLDPYLVVLNALPKVALAPI 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + ++ +  +    + +V++G +   +D   +  +F  +  +  R+
Sbjct: 125 IIFWVG----NGTTAIIVIALLISIVTTIISVLSGFNEIDSDKIMLMKTFRASKLQILRH 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I P   P +++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 181 LIFPYSIPVFISALKINVGLSWVGVIMGEFL------VAREGLGFLIVYGGQIAQLDMVM 234

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+      +   +
Sbjct: 235 MSIVILSVIAFIMYEIV 251



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  +   +       +L ++   T    +    +  +     A +         VL 
Sbjct: 48  TSTPSRMYKSLLAFYADGTLLRHIWVTCYETILGFTLGTVLGTAIAVILWWCPFASKVLD 107

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +      + +  N           A I       +     S+      I
Sbjct: 108 PYLVVLNALPKVALAPIIIFWVGNG--------TTAIIVIALLISIVTTIISVLSGFNEI 159

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D   + ++FR S  Q   +L  P+S+P  +  + +++   W  V+      +G+ ++ 
Sbjct: 160 DSDKIMLMKTFRASKLQILRHLIFPYSIPVFISALKINVGLSWVGVI------MGEFLVA 213

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +  + F+  +++
Sbjct: 214 REGLGFLIVYGGQIAQLDMVMMSIVILSVIAFIMYEIV 251


>gi|56965506|ref|YP_177239.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
 gi|56911751|dbj|BAD66278.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus
           clausii KSM-K16]
          Length = 287

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 9/202 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
             +R     I   + FV    +I ++L  I    +P+    +         L +  S T 
Sbjct: 29  RFTRYFLGPIIAFIVFVSTWQLIPLMLD-IPHYILPKPTDVVASAASQWPLLSEAVSVTV 87

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +      ++S +     + L A S+ +   + P   I+Q++P++      V++F   +  
Sbjct: 88  VVSAIGFLLSAVIGVGISILLASSKVIERSIYPYAIILQTLPVVAIAPIIVIWFGAGF-- 145

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                  A +   F    + +  +    L ++ + ++E+   +  S WQK W L VP ++
Sbjct: 146 ------NAIVVVSFLIGFFPIVSNTLMGLNSVNKQMDELFSLYNASKWQKMWRLRVPAAL 199

Query: 190 PGLVWNMMMSMSGGWFFVVASE 211
           P ++  + +S +      +  E
Sbjct: 200 PFMMAGLKISATLSIVGAIVGE 221



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 17/212 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------------- 373
             +   Q       +     F   ++  +     WQ I  +++   Y             
Sbjct: 14  VSKRSPQRKPQLASNRFTRYFLGPIIAFIVFVSTWQLIPLMLDIPHYILPKPTDVVASAA 73

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     +T+    +  +++++I + + I +     I   I P+A +L   P    
Sbjct: 74  SQWPLLSEAVSVTVVVSAIGFLLSAVIGVGISILLASSKVIERSIYPYAIILQTLPVVAI 133

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++V             + ++      + I+ N + G ++      E+ S ++ + W+ 
Sbjct: 134 APIIVIWFGAGFN----AIVVVSFLIGFFPIVSNTLMGLNSVNKQMDELFSLYNASKWQK 189

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              + +P   P+ + G   +   +   +IV E
Sbjct: 190 MWRLRVPAALPFMMAGLKISATLSIVGAIVGE 221


>gi|27381598|ref|NP_773127.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354766|dbj|BAC51752.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 19/222 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
                    +     +     IT+   ++  +I S+  + +G W   +P +++   P+ +
Sbjct: 44  FDVFSQIVKWFASGVIWKHLGITLAESILAFVIGSLGGVLIGFWFARQPLVAAVFDPYVK 103

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++ A P  V  P+    +     +       L+ F     + FNV  G         +  
Sbjct: 104 MVNALPRVVLAPIFALWLGLGIWSKVALGVTLVFFI----VFFNVYQGVKEVSRTVLDNG 159

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++  +  +++  P    +  +   T+ G A   ++V E            GLG  I
Sbjct: 160 RMLGMSERQLMQHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAGLGYLI 213

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
            ++        V  G+ ++  FV+ ++           +W P
Sbjct: 214 QQAEGVFDVAGVFAGMFVLSAFVILIDFGVTLVERRLLVWRP 255



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+   +        + ++   T    + A VI  L   +     A+   +  V  P +
Sbjct: 43  PFDVFSQIVKWFASGVIWKHLGITLAESILAFVIGSLGGVLIGFWFARQPLVAAVFDPYV 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++ ++P +       ++       KV        F +F        F++YQ +  + R 
Sbjct: 103 KMVNALPRVVLAPIFALWLGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSRT 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + +  R   +S  Q   ++  P ++  +  ++  S+       V  E +          G
Sbjct: 155 VLDNGRMLGMSERQLMQHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAG 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
           +G  I  A    D+  +   M  +   + L D    L+ R ++VW
Sbjct: 209 LGYLIQQAEGVFDVAGVFAGMFVLSAFVILIDFGVTLVERRLLVW 253


>gi|310780431|ref|YP_003968763.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
 gi|309749754|gb|ADO84415.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
          Length = 243

 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 99/242 (40%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N   ++  ++V   I++ L  +     P  I+++    +           T  R   A  
Sbjct: 5   NFKGIIFLLIVWQGISMKLDPLI-LPSPISILNVFRNNILTGKGIAETCITLYRFFMAYS 63

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +S+    +   L  K+  +   L P + I+QS P++ ++   +++F    P ++I   + 
Sbjct: 64  VSVSLGILCGMLIFKNSTVKSFLWPFITILQSTPVISWVLLALLWF----PSEIIPYFIL 119

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            IF +       +  + +  L +    L E++ ++ +   Q F  + +P  +  L+  + 
Sbjct: 120 GIFTLPV-----IIINTFNGLMSTDEKLLEMASAYGIEEKQVFSKIMLPSMLSSLMGGIK 174

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++ +     +  +E+I          GIG  +  A    +  ++L   + ++ +  L ++
Sbjct: 175 ITANSSLKVLATAEIIG-----RLPRGIGGEMNTAWINIETDSLLAWTIYLIILTGLLEK 229

Query: 258 LL 259
           L+
Sbjct: 230 LI 231



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 78/240 (32%), Gaps = 10/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
              N +    L I W  +   +   I    I  +            I   CIT++R  + 
Sbjct: 2   PGKNFKGIIFLLIVWQGISMKLDPLILPSPISILNVFRNNILTGKGIAETCITLYRFFMA 61

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             ++  + I  G+ I     + S + PF  +L + P   +  L +           +   
Sbjct: 62  YSVSVSLGILCGMLIFKNSTVKSFLWPFITILQSTPVISWVLLALLWF-----PSEIIPY 116

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            ++   T   I+ N   G  +      E+AS++ I   + +  I+LP +    + G    
Sbjct: 117 FILGIFTLPVIIINTFNGLMSTDEKLLEMASAYGIEEKQVFSKIMLPSMLSSLMGGIKIT 176

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +      +E+           G+G  +  +        ++   + +      L + +
Sbjct: 177 ANSSLKVLATAEIIG-----RLPRGIGGEMNTAWINIETDSLLAWTIYLIILTGLLEKLI 231


>gi|296330400|ref|ZP_06872881.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675995|ref|YP_003867667.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152668|gb|EFG93536.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414239|gb|ADM39358.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 217

 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           L A+V+ ++          + ++    ++ +++I+Q++P L
Sbjct: 8   LQTNGGELLYKTGEHLYISLIAVVLGIIVAVPLGVALTRMKKGAGAIIGVVNIVQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++GW++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTGWEQIRLVEIPLAIPIIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D +L
Sbjct: 173 NLYQPEYIIGGAVPVTILAIIIDYVL 198



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F   +   +++     ++  ++ +++  I+ +P+G+ +      +  I     ++   P
Sbjct: 6   TFLQTNGGELLYKTGEHLYISLIAVVLGIIVAVPLGVALTRMKKGAGAIIGVVNIVQTLP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +       +  +        +   + + F +   IL N   G      +  E      +T
Sbjct: 66  SLAILAFFIPLLGVG----KVPAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIGMT 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW   R + +P   P  + G  T+       + ++     G       GLG YI      
Sbjct: 122 GWEQIRLVEIPLAIPIIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNL 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                ++ G + +    + ++  L
Sbjct: 175 YQPEYIIGGAVPVTILAIIIDYVL 198


>gi|319442027|ref|ZP_07991183.1| putative ABC transporter permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 258

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   +  + +     + +G+  G  P + +   P      + P  V  P+    + Y 
Sbjct: 60  VTLAETLAGMALGIAAALLIGVAAGLLPVVGNAFSPLLVASQSIPTIVIGPVFTIALGYG 119

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L++     + +  N+++G  +      +   S H +    +  +  P   P
Sbjct: 120 ----MAPKVLVVALACFFPVAMNLLSGIRSADPVLIDTMRSLHASRSALFWRVRFPSALP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G       A  A++ SE          T GLG  + ++  +     V   V+++  
Sbjct: 176 SAFAGLRITATYAPVAAVFSEY------TGSTDGLGYLLLQAVPRLQTDFVFALVIVLTV 229

Query: 565 FVLAL 569
              AL
Sbjct: 230 MSAAL 234



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 19/262 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASR 67
             + +++ P +  ++       +        ++  +P        +  +    L      
Sbjct: 2   TRLRQQVLPPLVTVVLIAAAW-VFATTGGRTEDYILPSPGSVFAALGDNWSDRLGPATWV 60

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    L+ M + +    +    A     +G    P+L   QSIP +       +      
Sbjct: 61  TLAETLAGMALGIAAALLIGVAAGLLPVVGNAFSPLLVASQSIPTIVIGPVFTIALGYGM 120

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+   LA  F         +  ++   + +    L +  RS   S    FW +  P 
Sbjct: 121 APKVLVVALACFF--------PVAMNLLSGIRSADPVLIDTMRSLHASRSALFWRVRFPS 172

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYA 244
           ++P     + ++ +      V SE            G+G  +  A+         A++  
Sbjct: 173 ALPSAFAGLRITATYAPVAAVFSEY------TGSTDGLGYLLLQAVPRLQTDFVFALVIV 226

Query: 245 MLTMLGVIFLYDQLLFRPMIVW 266
           +  M   + L    L R    W
Sbjct: 227 LTVMSAALLLTVTALERLCCPW 248


>gi|219856276|ref|YP_002473398.1| hypothetical protein CKR_2933 [Clostridium kluyveri NBRC 12016]
 gi|219570000|dbj|BAH07984.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 274

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 78/210 (37%), Gaps = 15/210 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT F  ++  ++++ +   + I + +   IS  + P+  +L A P     P+
Sbjct: 75  GTLFTHIGITCFETILGFLLSTALGTLIAIILWWSEFISDILDPYIVVLNALPKVALAPI 134

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    +  V+ G      D   +  +F  +  +    
Sbjct: 135 IIFWVG----NGISAIILVTVLISIIVTILTVLNGFKEVDKDKITLLKTFGSSKLQILTN 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 191 LIIPSSVPTLISSLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDTVM 244

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + ++I+     A+   +      +  + LR
Sbjct: 245 VSIIILSILAYAMYASI-----SFAEKKLR 269



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 89/235 (37%), Gaps = 15/235 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           L+AF ++  I   L       T     +    I L +  +L  +   T    +   ++S 
Sbjct: 37  LIAFFVLWEIAGDLGWIDPFLTSTPSRMYKNLIALYLEGTLFTHIGITCFETILGFLLST 96

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               + A +   S  +  +L P + ++ ++P +      + +  N     ++   L +I 
Sbjct: 97  ALGTLIAIILWWSEFISDILDPYIVVLNALPKVALAPIIIFWVGNGISAIILVTVLISII 156

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               + +             + +D   + ++F  S  Q    L +P S+P L+ ++ +++
Sbjct: 157 VTILTVL--------NGFKEVDKDKITLLKTFGSSKLQILTNLIIPSSVPTLISSLKINV 208

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              W  V+  E +V  +      G+G  I    +   L  ++ +++ +  + +  
Sbjct: 209 GLSWVGVIMGEFLVAKE------GLGFLIIYGGQISQLDTVMVSIIILSILAYAM 257


>gi|94499479|ref|ZP_01306016.1| ABC transporter, permease protein [Oceanobacter sp. RED65]
 gi|94428233|gb|EAT13206.1| ABC transporter, permease protein [Oceanobacter sp. RED65]
          Length = 277

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 11/194 (5%)

Query: 378 YVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           YV W    + + R+ + + IA+ I + +G+  G  P  SS + P   +++  P     P+
Sbjct: 70  YVFWQDTASSLTRLALGVAIAATIGLMIGLLAGSLPLFSSWLSPLLTVVSLIPPLAILPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L+  G   +I  +++      P++    A +      +    
Sbjct: 130 LFIVFGLGELSK----VMLIAIGITPFIARDILRRTQEVPSEQLVKAQTLGANTSQILIR 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP I P  +     + G  W   I +E  +       T GLG  I       +   ++
Sbjct: 186 VLLPQIMPKLIDAVRLSLGAGWLFLIAAEAVA------ATDGLGYRIFLVRRYMAMDVIL 239

Query: 557 LGVLIMCCFVLALN 570
             V  +      ++
Sbjct: 240 PYVAWITLLAFLID 253



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q  + +  R+   + I+     +   LA         L P+L ++  IP L  L    +
Sbjct: 73  WQDTASSLTRLALGVAIAATIGLMIGLLAGSLPLFSSWLSPLLTVVSLIPPLAILPILFI 132

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F           EL+ +  I       +   + +    +P +    +++   +  Q   
Sbjct: 133 VFGLG--------ELSKVMLIAIGITPFIARDILRRTQEVPSEQLVKAQTLGANTSQILI 184

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P  MP L+  + +S+  GW F++A+E +   D      G+G  I L  +   +  I
Sbjct: 185 RVLLPQIMPKLIDAVRLSLGAGWLFLIAAEAVAATD------GLGYRIFLVRRYMAMDVI 238

Query: 242 LYAMLTMLGVIFLYD 256
           L  +  +  + FL D
Sbjct: 239 LPYVAWITLLAFLID 253


>gi|307719593|ref|YP_003875125.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306533319|gb|ADN02853.1| transporter [Spirochaeta thermophila DSM 6192]
          Length = 271

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 15/233 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R         +  + V    + L             V    +      LP +   T L  
Sbjct: 6   RSTASPFLTGVGLLAVWEAASRLGAVSPFLLPAPSAVLAELVRQAPLLLP-HLGATLLSG 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   ++ +      A +     RL   L P L I Q+IPI+      +++F      K++
Sbjct: 65  LGGFLVGVFLGVGLALVLDAFPRLRAALYPFLVISQTIPIIFLYPLFLIWFGYGLTSKLM 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +          S+   L ++  +L ++  S R   WQ FW +  P ++P L
Sbjct: 125 VVVLVCFFPVIV--------SLLDGLASVDPELLDLFASMRAGWWQTFWLVRFPAALPSL 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
              + +S +      V  E +          G+G Y+  A K      +  A+
Sbjct: 177 FSGLTVSATYSIMGAVIGEWLG------APRGLGVYMLRAYKTFSTARVFAAI 223



 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 77/232 (33%), Gaps = 10/232 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
             ++    S       L   W       A+          V     +    ++     T+
Sbjct: 2   RRSWRSTASPFLTGVGLLAVWEAASRLGAVSPFLLPAPSAVLAELVRQAPLLLPHLGATL 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +   ++   + + + + +   P + + + PF  +    P    +PL +    Y   +
Sbjct: 62  LSGLGGFLVGVFLGVGLALVLDAFPRLRAALYPFLVISQTIPIIFLYPLFLIWFGYGLTS 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 ++++    + ++ +++ G ++   +  ++ +S     W+ +  +  P   P   
Sbjct: 122 K----LMVVVLVCFFPVIVSLLDGLASVDPELLDLFASMRAGWWQTFWLVRFPAALPSLF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           +G   +   +   +++ E            GLG Y+  + +  S   V   +
Sbjct: 178 SGLTVSATYSIMGAVIGEWLG------APRGLGVYMLRAYKTFSTARVFAAI 223


>gi|84499512|ref|ZP_00997800.1| ABC transporter, inner membrane subunit [Oceanicola batsensis
           HTCC2597]
 gi|84392656|gb|EAQ04867.1| ABC transporter, inner membrane subunit [Oceanicola batsensis
           HTCC2597]
          Length = 254

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 8/184 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++R V  + +A I    +G+ +GF       + P      A P     P++       H
Sbjct: 59  TLWRTVAGLGLAVIFGTLLGMIMGFSRIARDGLYPLLVGFNAVPKATLVPVLALLFIGQH 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              N    L+    + + I  +V  G S    +++++  S   +    +R I LP   P 
Sbjct: 119 ---NFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKVTIFRKIALPKTLPE 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +      +   A+  + + E+ S         GLGA         ++P +   ++ +   
Sbjct: 176 FFGALKVSVTLAFIGTNLVEIISPHGR-----GLGALFLSGQTNSNYPLMFAVLIALAVL 230

Query: 566 VLAL 569
            + L
Sbjct: 231 GILL 234



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 74/208 (35%), Gaps = 15/208 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T  R ++ + ++++F  +   +   SR     L P+L    ++P    +    + F+  
Sbjct: 58  QTLWRTVAGLGLAVIFGTLLGMIMGFSRIARDGLYPLLVGFNAVPKATLVPVLALLFIGQ 117

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +           +   F    + +  S+   L  +  +  ++ RS   S    F  + +P
Sbjct: 118 H-------NFNTVLMAFLISFFPIAVSVGIGLSTLEPEYRDILRSLGASKVTIFRKIALP 170

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P     + +S++  +      E+I          G+G+         +   +   ++
Sbjct: 171 KTLPEFFGALKVSVTLAFIGTNLVEIIS-----PHGRGLGALFLSGQTNSNYPLMFAVLI 225

Query: 247 TMLGVIFLY---DQLLFRPMIVWSNKFR 271
            +  +  L       L +    W+ + +
Sbjct: 226 ALAVLGILLYYGVVALEKIFAGWAERLQ 253


>gi|270290098|ref|ZP_06196324.1| osmoprotectant transport system permease [Pediococcus acidilactici
           7_4]
 gi|304385643|ref|ZP_07367987.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pediococcus
           acidilactici DSM 20284]
 gi|270281635|gb|EFA27467.1| osmoprotectant transport system permease [Pediococcus acidilactici
           7_4]
 gi|304328147|gb|EFL95369.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pediococcus
           acidilactici DSM 20284]
          Length = 211

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 76/190 (40%), Gaps = 19/190 (10%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + ++       L  ++ ++   ++ +  +MQ+IP L  L   +  F          
Sbjct: 25  VALALGIIVAVPLGMLLTRAPKISGAVIGLASVMQTIPALALLAIMIPIFGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+F   +  +  + Y  L ++   L + ++   ++ +Q+ W + +  ++P ++
Sbjct: 78  -STPAIVALFIYSLLPILRNTYLGLTSVDPALIDAAKGMGMNSFQRMWKVELQLALPVIM 136

Query: 194 WNMMMSMS--GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + +S +    W  +          + I   G+G  I   +       IL   + ++ +
Sbjct: 137 AGVRLSATYVIAWTAL---------ASYIGAGGLGDLIFNGLNLYRSDLILGGSIPVIIL 187

Query: 252 IFLYDQLLFR 261
             + D LL +
Sbjct: 188 ALVADFLLGK 197



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 7/173 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V + +  I+ +P+G+ +   P IS  +   A ++   PA     +++          + 
Sbjct: 24  AVALALGIIVAVPLGMLLTRAPKISGAVIGLASVMQTIPALALLAIMIPIFGIG----ST 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G ++      + A    +  ++    + L    P  + G 
Sbjct: 80  PAIVALFIYSLLPILRNTYLGLTSVDPALIDAAKGMGMNSFQRMWKVELQLALPVIMAGV 139

Query: 511 ITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             +     AW A   S + + G   L   GL  Y ++    GS P ++L ++ 
Sbjct: 140 RLSATYVIAWTAL-ASYIGAGGLGDLIFNGLNLYRSDLILGGSIPVIILALVA 191


>gi|167770261|ref|ZP_02442314.1| hypothetical protein ANACOL_01604 [Anaerotruncus colihominis DSM
           17241]
 gi|167667583|gb|EDS11713.1| hypothetical protein ANACOL_01604 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 16/253 (6%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLP 62
            + P   SR I      +   +L I  +   +  +     + P  I+    + L   +L 
Sbjct: 35  ELHPGRRSRIIRAGRAAVAVLLLFIWEVFTRIGWLDPYYWSRPSTILKTAAVQLSQGTLL 94

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
              + T+   +   V+  +           S+    +  P L ++ ++P L      V+ 
Sbjct: 95  MDIAYTSGSTILGFVLGTVIGSALGLTFWWSKTYAGISEPYLIVLNALPKLALAPVLVIL 154

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F   +P KVI          F+  V     S Y  + ++   +E +  S   + WQ F  
Sbjct: 155 FGIGFPSKVI--------LAFSMTVIVSALSAYSGVKSVDPAMETLLYSLGANRWQVFSK 206

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP+SMP +V ++ ++++      +  E I          G+G  +  A    D+  + 
Sbjct: 207 VVVPWSMPWMVSSLRVNIALALAGAIVGEFIASS------HGVGRMVIYAGTILDINLVW 260

Query: 243 YAMLTMLGVIFLY 255
             ++ +  +    
Sbjct: 261 VGVMVLSILSMAM 273



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 82/247 (33%), Gaps = 14/247 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV----LYVIWL 382
            P    ++    R +  + + +   V      +                V      ++  
Sbjct: 37  HPGRRSRIIRAGRAAVAVLLLFIWEVFTRIGWLDPYYWSRPSTILKTAAVQLSQGTLLMD 96

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T    ++  ++ ++I   +G+   +    +   +P+  +L A P     P++V    
Sbjct: 97  IAYTSGSTILGFVLGTVIGSALGLTFWWSKTYAGISEPYLIVLNALPKLALAPVLVILFG 156

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +  +    + +  +      +  +G  +     + +  S     W+ +  +++P  
Sbjct: 157 IGFPSKVILAFSMTVIVSA----LSAYSGVKSVDPAMETLLYSLGANRWQVFSKVVVPWS 212

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ V+        A   +IV E  +       + G+G  +  +        V +GV+++
Sbjct: 213 MPWMVSSLRVNIALALAGAIVGEFIA------SSHGVGRMVIYAGTILDINLVWVGVMVL 266

Query: 563 CCFVLAL 569
               +A+
Sbjct: 267 SILSMAM 273


>gi|13471705|ref|NP_103272.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14022449|dbj|BAB49058.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 273

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 90/247 (36%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +L+   +     GI+ T +P          L+  +L   A  T    L     SL  
Sbjct: 27  VGLLLMAWELYATYSGIKPTILPAPSRVFEQAMLNRDALIDNAIPTIRATLIGFACSLGA 86

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F  + L    + L   L P+  + Q++P++      V++F      K++   L   F  
Sbjct: 87  AFTLSMLVDFFQPLRRALFPVFIVSQTLPLVAIAPLVVLWFGFGLTPKIMLVALVTFF-- 144

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M  ++ Q       ++ ++ R+     W+ F    +P ++P     + +S++ 
Sbjct: 145 ------PMLVALVQGYEATEVEIGQMLRAMGAGRWRVFVLARLPSALPYFFAGLRISITY 198

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQLL 259
                + +E            G+G Y+  A        +L A+   + +  ++F    LL
Sbjct: 199 AVVGAIFAEYAGAAK------GLGIYMLNAKNNFRPDLVLAAVGVSVALTLILFGLTVLL 252

Query: 260 FRPMIVW 266
            R  + W
Sbjct: 253 QRLAMPW 259



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 66/200 (33%), Gaps = 13/200 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     T+   ++    +      + + + F   +   + P   +    P     PLVV
Sbjct: 65  LIDNAIPTIRATLIGFACSLGAAFTLSMLVDFFQPLRRALFPVFIVSQTLPLVAIAPLVV 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +          +L+   T + +L  ++ G  A   +  ++  +     WR +    
Sbjct: 125 LWFGFGLTPK----IMLVALVTFFPMLVALVQGYEATEVEIGQMLRAMGAGRWRVFVLAR 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY+  G   +   A   +I +E A          GLG Y+  +        V+  
Sbjct: 181 LPSALPYFFAGLRISITYAVVGAIFAEYAG------AAKGLGIYMLNAKNNFRPDLVLAA 234

Query: 559 V---LIMCCFVLALNRFLWH 575
           V   + +   +  L   L  
Sbjct: 235 VGVSVALTLILFGLTVLLQR 254


>gi|158424119|ref|YP_001525411.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331008|dbj|BAF88493.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 266

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 17/280 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           ++    +     G  R   P           +   L   W   V    + +        V
Sbjct: 1   MAMAPARTLPHRGGWRVAMPSPSRVALYQIALLLALLALWEAGVALGWLPVFLYGRPSGV 60

Query: 369 NHFTYQDVLY--VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
               +Q +L   +     +T +  +    I +++    G+ +   P  ++ ++P+   L 
Sbjct: 61  IAKGWQLILSGELARDAALTAWEAISGFAIGTVLGSAAGLTLWLFPTGAAVLRPYMIALN 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++        +     +++         L     GA     D  ++  S 
Sbjct: 121 GLPKIALAPLIIVWFGIGLGSKIAIAAIITFIVA----LITAQQGAKEVDADLVKLMRSL 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  R WR +I+PG  P+ V+      G A   ++V E  +         GLG  I  +
Sbjct: 177 GASRLRTWRTVIVPGAMPWIVSAFRLNVGFALIGAVVGEYIA------SKEGLGYMIYYA 230

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                   V +G+  +    LA+   +         R LR
Sbjct: 231 GVLYDLNAVWVGIAALMGVALAMYGVI-----DLIERRLR 265



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  ++      +    L + A+ T    +S   I  +                 VL P +
Sbjct: 57  PSGVIAKGWQLILSGELARDAALTAWEAISGFAIGTVLGSAAGLTLWLFPTGAAVLRPYM 116

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +  +P +      +V+F      K+  A +        +          Q    +  D
Sbjct: 117 IALNGLPKIALAPLIIVWFGIGLGSKIAIAAIITFIVALITA--------QQGAKEVDAD 168

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L ++ RS   S  + +  + VP +MP +V    +++       V  E I   +      G
Sbjct: 169 LVKLMRSLGASRLRTWRTVIVPGAMPWIVSAFRLNVGFALIGAVVGEYIASKE------G 222

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +G  I  A    DL A+   +  ++GV    
Sbjct: 223 LGYMIYYAGVLYDLNAVWVGIAALMGVALAM 253


>gi|319651945|ref|ZP_08006067.1| YtlD protein [Bacillus sp. 2_A_57_CT2]
 gi|317396344|gb|EFV77060.1| YtlD protein [Bacillus sp. 2_A_57_CT2]
          Length = 269

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 78/203 (38%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T      ++     T+   V   I+ + +   +   + + P +S    P+  +L + P 
Sbjct: 65  LTKIQDGTLMVDLGYTLSETVFGFILGTFLGTLLAAILWWSPMLSKIADPYLVVLNSMPK 124

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+++  +     +     +++ I  T   +  +          ++ +V  +F    
Sbjct: 125 VALGPILIVALGPSFTSIVAMGAIISIIITTIVVYTSF----KEVDPNYIKVLQTFGANR 180

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++ +R  ILP  FP  ++      G +W   IV E        + + GLG  I    +  
Sbjct: 181 FQIFREAILPASFPTIISTLKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVF 234

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           +F  V+L +L++  F   + + +
Sbjct: 235 NFTLVMLSLLVIAVFATVMYQLV 257



 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   +L      T    +   ++      + A +   S  L  +  P
Sbjct: 55  SSPSKVWGLFLTKIQDGTLMVDLGYTLSETVFGFILGTFLGTLLAAILWWSPMLSKIADP 114

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V     +   V    + +I              +Y S   + 
Sbjct: 115 YLVVLNSMPKVALGPILIVALGPSFTSIVAMGAIISIIITTIV--------VYTSFKEVD 166

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 167 PNYIKVLQTFGANRFQIFREAILPASFPTIISTLKVNVGLSWVGVIVGEFLVSSK----- 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   ++ ++L +     +  QL+
Sbjct: 222 -GLGYMIIYGFQVFNFTLVMLSLLVIAVFATVMYQLV 257


>gi|205372754|ref|ZP_03225564.1| ABC transporter permease [Bacillus coahuilensis m4-4]
          Length = 252

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 80/234 (34%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  + +   I+ ++  I    +P     I        S  +    T+       +I   
Sbjct: 14  VLLLLFIFWEISTVIWDIPAWMLPAPSSIIQEFFSIWDSFKEDVWSTSYLTFMGFIIGCS 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V + L      L     P+L + Q+IPI+      V++F            L  I  
Sbjct: 74  IGIVTSILLHLVPSLREAFYPLLILSQNIPIIVLAPLLVIWFGFGL--------LPKIIV 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  +    L   P +     +    +  Q FW + VP S+P L   + +S +
Sbjct: 126 ITLVCFFPVAVATLDGLRQTPDEYLHYMKMAGATKRQIFWKVEVPSSLPSLFSGLKISAT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V SE +          GIG ++ LA        +  A+  ++ +  ++
Sbjct: 186 YSVMGAVISEWLGAKA------GIGVFMTLASSSFRTDRVFVAIFLIMILSMVF 233



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 61/184 (33%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +   +  II   I I   I +   P +     P   L    P  V  PL+V    +  
Sbjct: 60  TSYLTFMGFIIGCSIGIVTSILLHLVPSLREAFYPLLILSQNIPIIVLAPLLVIWFGFGL 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +++     + +    + G    P+++         T  + +  + +P   P 
Sbjct: 120 L----PKIIVITLVCFFPVAVATLDGLRQTPDEYLHYMKMAGATKRQIFWKVEVPSSLPS 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   +   +   +++SE            G+G ++  ++       V + + ++   
Sbjct: 176 LFSGLKISATYSVMGAVISEWLG------AKAGIGVFMTLASSSFRTDRVFVAIFLIMIL 229

Query: 566 VLAL 569
            +  
Sbjct: 230 SMVF 233


>gi|332969277|gb|EGK08304.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Desmospora sp. 8437]
          Length = 266

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 17/232 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++   +P        +      L ++   T         + +    + A        L  
Sbjct: 35  VEAWLLPAPSRIAASLVESWELLLRHTGPTLTEAALGFGLGIGVALLLAVGIELFPWLRR 94

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            + P+L   Q++P++      +++F      KV+   L   F         +  S    L
Sbjct: 95  GVYPLLITSQTVPVIAVAPLLILWFGYGLLPKVLIVALVTFF--------PVVVSTVDGL 146

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +   D+  + +S     W+ F  +  P ++P     M ++ + G    V +E +   + 
Sbjct: 147 RSADPDMVRLLKSMGAGEWRVFRMVRFPHALPSFFSGMKIAATYGILGAVIAEWLGASE- 205

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTML---GVIFLYDQLLFRPMIVWS 267
                G+G ++  +        +  A+  +     ++F   Q+L R    W+
Sbjct: 206 -----GLGVFLIRSQNSFAADRVFVAIAAITFWSLILFGLVQVLARWAAPWA 252



 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 79/256 (30%), Gaps = 11/256 (4%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
                  +       ++L   W      V +          +     +    ++     T
Sbjct: 5   LRNRLRGIFPPLLTLFLLLAVWEAGARLVKVEAWLLPAPSRIAASLVESWELLLRHTGPT 64

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +    +   +   + + + + I   P +   + P        P     PL++    Y  L
Sbjct: 65  LTEAALGFGLGIGVALLLAVGIELFPWLRRGVYPLLITSQTVPVIAVAPLLILWFGYGLL 124

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L++   T + ++ + + G  +   D   +  S     WR +R +  P   P +
Sbjct: 125 ----PKVLIVALVTFFPVVVSTVDGLRSADPDMVRLLKSMGAGEWRVFRMVRFPHALPSF 180

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            +G   A       ++++E          + GLG ++  S    +   V + +  +  + 
Sbjct: 181 FSGMKIAATYGILGAVIAEWLG------ASEGLGVFLIRSQNSFAADRVFVAIAAITFWS 234

Query: 567 LALNRFLWHPLYLYGT 582
           L L   +   L  +  
Sbjct: 235 LILFGLV-QVLARWAA 249


>gi|167747514|ref|ZP_02419641.1| hypothetical protein ANACAC_02235 [Anaerostipes caccae DSM 14662]
 gi|167652876|gb|EDR97005.1| hypothetical protein ANACAC_02235 [Anaerostipes caccae DSM 14662]
          Length = 254

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 10/195 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++    +T+    + +++  +I   + + +     +     P   L    P     
Sbjct: 52  DFPLLMANARVTILESFIGLLMGVVIGFLMAVLMDHFDKLYKAFYPLIVLTQTVPTVAIA 111

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V    Y      L   +L++  T + I  +++ G  +   D   +  S   +  + +
Sbjct: 112 PLLVLWFGYE----MLPKVILIVIVTFFPITVSLLDGFRSADKDTISLMRSMGASKLQIF 167

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+  PG    +      +   A   +++SE            GLG Y+    +  +F +
Sbjct: 168 RYVKFPGSLSQFFASLRISASYAVVGAVISEWLGGFE------GLGVYMIRVKKGFAFDK 221

Query: 555 VVLGVLIMCCFVLAL 569
           +   + ++    L L
Sbjct: 222 MFAVIFMISAISLLL 236



 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 84/239 (35%), Gaps = 16/239 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++   A ++++ +           +  +P  +  +     D   L   A  T L     +
Sbjct: 12  LWPAAAILVILAMWQTASGTGMVSKFLLPSPVDVVRAFVNDFPLLMANARVTILESFIGL 71

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++ ++  F+ A L     +L     P++ + Q++P +      V++F            L
Sbjct: 72  LMGVVIGFLMAVLMDHFDKLYKAFYPLIVLTQTVPTVAIAPLLVLWFGYEM--------L 123

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +  I     + +T S+     +  +D   + RS   S  Q F Y+  P S+     ++
Sbjct: 124 PKVILIVIVTFFPITVSLLDGFRSADKDTISLMRSMGASKLQIFRYVKFPGSLSQFFASL 183

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +S S      V SE +          G+G Y+    K      +   +  +  +  L 
Sbjct: 184 RISASYAVVGAVISEWLGG------FEGLGVYMIRVKKGFAFDKMFAVIFMISAISLLL 236


>gi|292669576|ref|ZP_06603002.1| choline transporter [Selenomonas noxia ATCC 43541]
 gi|292648785|gb|EFF66757.1| choline transporter [Selenomonas noxia ATCC 43541]
          Length = 513

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 20/196 (10%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+ I+++       L  K  R     +  ++ + +IP +  L F + +F          
Sbjct: 31  AAIGIAIVLGGAAGILIHKYERAAAPTLGTVNFLYTIPSISMLGFLIPFFGIGNR----- 85

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              +AI A+    +  M  + +  L  +   L E +     S +    ++ +P +MP ++
Sbjct: 86  ---SAIIALTIYALLPMVRATHTGLTQVQSSLREAAIGLGGSAFYTLTHVQLPIAMPVIM 142

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +             +  +    + I   G+G  I   I   +    +   L +  +  
Sbjct: 143 TGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNTALTIAGSLLIAILAL 195

Query: 254 LYDQLLFRPMIVWSNK 269
             D +L      W+ +
Sbjct: 196 AVDGVL-----GWAER 206



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 16/208 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    ++     I IA ++    GI I      ++        L   P+      +
Sbjct: 17  FFLQLMIEHLWISGAAIGIAIVLGGAAGILIHKYERAAAPTLGTVNFLYTIPSISMLGFL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      + +  + L++  +      ++     G +   +  +E A     + +    ++
Sbjct: 77  IPFFGIGNRSAIIALTIYALL----PMVRATHTGLTQVQSSLREAAIGLGGSAFYTLTHV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  +TG         N + ++   +     +   GLG  I       +    + 
Sbjct: 133 QLPIAMPVIMTGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNTALTIA 185

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G L++    LA++  L      +  R +
Sbjct: 186 GSLLIAILALAVDGVL-----GWAERRM 208


>gi|71736040|ref|YP_276107.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257486539|ref|ZP_05640580.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|71556593|gb|AAZ35804.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325545|gb|EFW81607.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320327168|gb|EFW83182.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330882805|gb|EGH16954.1| ABC transporter permease [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330889477|gb|EGH22138.1| ABC transporter permease [Pseudomonas syringae pv. mori str.
           301020]
 gi|331010023|gb|EGH90079.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 271

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q  + +  R+   + IS L        A      G  L P+L +M  +P L  L    
Sbjct: 71  LWQDTASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMVPPLAILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q    IP +L   +++   S W   
Sbjct: 131 IVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +L D  L
Sbjct: 237 ILPYVVWITLLAWLMDWGL 255



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 71/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++++ + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  ASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|187735788|ref|YP_001877900.1| binding-protein-dependent transporters inner membrane component
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187425840|gb|ACD05119.1| binding-protein-dependent transport systems inner membrane
           component [Akkermansia muciniphila ATCC BAA-835]
          Length = 259

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P  I   +   +  +SL      T  R+    +  +        L+A+ + +   +  
Sbjct: 37  PAPSTISGYLEEAIRDNSLWSATFVTIRRLFLGYLAGISIGIPAGLLSARFQIIRNTIGV 96

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +    Q +P + ++   +++F           E A +F +    VW++  +    L NIP
Sbjct: 97  LALGFQGLPSVCWVPLAILWFGQE--------EAAILFVVIMGTVWSVILATENGLANIP 148

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
                 +R+          ++ +P S P +V  M    +  W  ++++E+ V   T + L
Sbjct: 149 PIYARAARTMGAGSAYTLLFVTLPASAPFIVSGMKQGWAFSWRSLMSAEIFVPILTGLGL 208

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
                 +    +   +  ++  M  ++ +  L D+L+F P+
Sbjct: 209 G---QLLHFGRELNSMEQVMGIMFVIILLGLLSDKLIFSPL 246



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 7/194 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R+ +  +    I IP G+       I + I   A      P+  + PL +     
Sbjct: 60  FVTIRRLFLGYLAGISIGIPAGLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFG- 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  ++I GT W ++     G +  P  +   A +          ++ LP   
Sbjct: 119 ---QEEAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGAGSAYTLLFVTLPASA 175

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ V+G       +W + + +E+       L    L  +     E  S  +V+  + ++ 
Sbjct: 176 PFIVSGMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHF---GRELNSMEQVMGIMFVII 232

Query: 564 CFVLALNRFLWHPL 577
              L  ++ ++ PL
Sbjct: 233 LLGLLSDKLIFSPL 246


>gi|187477249|ref|YP_785273.1| ABC transporter permease [Bordetella avium 197N]
 gi|115421835|emb|CAJ48353.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 275

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 19/229 (8%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  +       +    L ++A  T        V+              S     V+ PI
Sbjct: 53  SPAGVAQAAWKMMLSGELLEHAGYTLWASALGFVVGTAVGTAPGLGLWYSPYAAKVVEPI 112

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKV-IGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           L  + S+P + F    +++F      KV +   L AI A+          + +Q+  +  
Sbjct: 113 LVAVNSVPKIAFAPLIILWFGTGLISKVALSISLTAIVAL---------LAAFQAAKDTD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D++ +  S   +  Q F  + VP ++P ++    +++       V  E I         
Sbjct: 164 PDIQRMMASLGATRNQVFGKVVVPAALPYIISTFRINIGFALVGTVVGEFIS------SK 217

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268
            GIG  I +A    DL  +   + T++ + F+      +  + ++ W +
Sbjct: 218 YGIGHVIFVASSLYDLNTVWVGIFTLMLLGFVLSAGVDIAEKRLLRWKD 266



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 81/243 (33%), Gaps = 12/243 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCIT 386
                L +   +  +L   W   V    I          V    ++ +L   ++     T
Sbjct: 18  PRPPVLAAQLLILVLLFGAWELGVSAGYINGFLFGSPAGVAQAAWKMMLSGELLEHAGYT 77

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   +  ++ + +    G+ + + P+ +  ++P    + + P   F PL++       +
Sbjct: 78  LWASALGFVVGTAVGTAPGLGLWYSPYAAKVVEPILVAVNSVPKIAFAPLIILWFGTGLI 137

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       L         L      A     D + + +S   T  + +  +++P   PY 
Sbjct: 138 SKVALSISLTAIVA----LLAAFQAAKDTDPDIQRMMASLGATRNQVFGKVVVPAALPYI 193

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++      G A   ++V E  S         G+G  I  ++       V +G+  +    
Sbjct: 194 ISTFRINIGFALVGTVVGEFIS------SKYGIGHVIFVASSLYDLNTVWVGIFTLMLLG 247

Query: 567 LAL 569
             L
Sbjct: 248 FVL 250


>gi|296162837|ref|ZP_06845619.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295886933|gb|EFG66769.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 307

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 84/232 (36%), Gaps = 16/232 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIWLGCITMFRVVVLIIIA 397
           W   V  +A   AW  +  +  +             QD   +      T+   ++   +A
Sbjct: 62  WVVGVVVLAAWQAWCVVMKVPAYLVPSPSAIVSELVQDAPLLFGSLLATLKITLLAFALA 121

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ + + +     P I + + P+A LL   P     PL++  V     + +  L L   
Sbjct: 122 TLLGVVIALLFVQSPLIEASLFPYAILLQVTPVVAIAPLIIIWVK----DMDAALVLCAT 177

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               + I+ N   G  +       +      T W+    + +P   PY+  G   + G +
Sbjct: 178 LVALFPIISNTALGLRSVNPGLINLFRINRATRWQTLVRLRIPSALPYFFGGLRISSGLS 237

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              ++V+E  +         GL   I ++  + + P +   +L++    + L
Sbjct: 238 LIGAVVAEFVAG--TGGSGAGLAYQILQAGFQLNIPRLFAALLLITVTGVVL 287



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 10/237 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + +   VL       ++  +    VP     +  +  D   L      T    L A  +
Sbjct: 61  PWVVGVVVLAAWQAWCVVMKVPAYLVPSPSAIVSELVQDAPLLFGSLLATLKITLLAFAL 120

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L   V A L  +S  +   L P   ++Q  P++      +++  ++    V+ A L A
Sbjct: 121 ATLLGVVIALLFVQSPLIEASLFPYAILLQVTPVVAIAPLIIIWVKDMDAALVLCATLVA 180

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I +        +    L ++   L  + R  R + WQ    L +P ++P     + +
Sbjct: 181 LFPIIS--------NTALGLRSVNPGLINLFRINRATRWQTLVRLRIPSALPYFFGGLRI 232

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           S        V +E +          G+   I  A  + ++  +  A+L +     + 
Sbjct: 233 SSGLSLIGAVVAEFVAGTGGSGA--GLAYQILQAGFQLNIPRLFAALLLITVTGVVL 287


>gi|239834160|ref|ZP_04682488.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239822223|gb|EEQ93792.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 280

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V     +D   ++     T+   ++ +  A I  I +G+       I     PFA +L 
Sbjct: 60  LVAQTLIKDGPSLMASMWFTVKLTLISLGCAIIGGILLGMIFALSRPIEMAFFPFAVILQ 119

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++  V        +   ++      + IL N + G  +  ++ +++   +
Sbjct: 120 VTPVIAIAPLILIYVRDTFSALLICAWIV----AFFPILSNTVIGLRSADHNLRDLFRLY 175

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+  RY++ P   PY++     A G +   ++V+E  +      ++TGL + I ES
Sbjct: 176 RASPWQRLRYLLAPSALPYFMAALKIAGGLSLIGAVVAEFVAG--TAGQSTGLASRILES 233

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           + +   P +   + ++    + +
Sbjct: 234 SFRNEIPRMFAALFLVSLLGIVI 256



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 101/258 (39%), Gaps = 16/258 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +  ++A  +  G++    + +    +P   +    +  D  SL      T    L 
Sbjct: 28  VMPTLAIIIALGIWEGLVR--YYQVPHYLIPAPSLVAQTLIKDGPSLMASMWFTVKLTLI 85

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++  +++   +   + A SR + M   P   I+Q  P++      ++Y  + +   +I A
Sbjct: 86  SLGCAIIGGILLGMIFALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLICA 145

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + A F I +        +    L +   +L ++ R +R S WQ+  YL  P ++P  + 
Sbjct: 146 WIVAFFPILS--------NTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYFMA 197

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGV 251
            + ++        V +E   V  T     G+ S I  +    ++  +  A+     +  V
Sbjct: 198 ALKIAGGLSLIGAVVAEF--VAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLGIV 255

Query: 252 IFLYDQLLFR-PMIVWSN 268
           IFL    L R  +  W  
Sbjct: 256 IFLVTSWLSRLVLGRWHE 273


>gi|307727957|ref|YP_003911170.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
 gi|307588482|gb|ADN61879.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1003]
          Length = 284

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 91/260 (35%), Gaps = 20/260 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R     F ++AF  +      +          P  I   +   +  H L      T    
Sbjct: 31  RAALQFFAVIAFFAIWEGAARVGWVSNFLVGSPSKIFAALVRDVHSHQLFIDTGYTLFEA 90

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV- 131
           +   V+      V       S  +  ++ P +  + S+P + F    +++F      KV 
Sbjct: 91  ILGFVLGTAVGSVCGLALWYSPFVARLIEPFIVAINSVPKIAFAPIVILWFGTGLISKVA 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   L AI A+          + Y++  +   DL+ +  +   +    F  + VPF++P 
Sbjct: 151 LAVSLTAIVAL---------IAAYEAAKDADPDLQALLVTLGANKNDVFMKVVVPFTLPY 201

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++    +++  G    V  E I          G+G  I  A    DL  +   +  ++ +
Sbjct: 202 VISTFRINVGFGLVGAVVGEFIS------SEKGLGHMIFTASSLYDLNTVWEGLFVLMAI 255

Query: 252 IFLYDQL---LFRPMIVWSN 268
            F+   L   L R ++ W  
Sbjct: 256 GFVLYFLIDMLERKLLPWRQ 275



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 78/265 (29%), Gaps = 12/265 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSI 364
           + +  +          +RF     + +              W     V  V+  +     
Sbjct: 5   ASIGKSAPAQRAAKPRVRFVLDSGWGRAALQFFAVIAFFAIWEGAARVGWVSNFLVGSPS 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
                         +      T+F  ++  ++ + +    G+ + + P ++  I+PF   
Sbjct: 65  KIFAALVRDVHSHQLFIDTGYTLFEAILGFVLGTAVGSVCGLALWYSPFVARLIEPFIVA 124

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           + + P   F P+V+       ++       L         L      A     D + +  
Sbjct: 125 INSVPKIAFAPIVILWFGTGLISKVALAVSLTAIVA----LIAAYEAAKDADPDLQALLV 180

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +        +  +++P   PY ++      G     ++V E  S         GLG  I 
Sbjct: 181 TLGANKNDVFMKVVVPFTLPYVISTFRINVGFGLVGAVVGEFISSEK------GLGHMIF 234

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++       V  G+ ++      L
Sbjct: 235 TASSLYDLNTVWEGLFVLMAIGFVL 259


>gi|84516873|ref|ZP_01004231.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
 gi|84509341|gb|EAQ05800.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
          Length = 253

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 12/216 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLIIIASIIW 401
           + +      +   + W +                    + +G  T++R V  +++A +  
Sbjct: 14  LIFLAAWEALVWVMGWPTFKMAAPSDLPPAYAKYWELFLTMGWQTLWRTVAGLLLAVVFG 73

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
             +G+ +GF   +   + P      A P     P+V      +H   +    L+    + 
Sbjct: 74  TALGMVMGFSRTMRDALYPLLVGFNAVPKATVVPIVALMFVGWH---DFNTVLIAFMISF 130

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + I  +V  G S    +++++  S   +    +  I LP   P +      +   A+  +
Sbjct: 131 FPIAVSVSIGLSTLEPEYRDILRSLGASQSTIFWKIALPKTLPEFFGALKVSVTLAFIGT 190

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            + E+ S         GLGA          +P +  
Sbjct: 191 NLMEIVSPHGR-----GLGALFDSGKTNSDYPLMFA 221



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 96/264 (36%), Gaps = 18/264 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             +R+++  +  LL F+     ++ ++     +   P D+                  +T
Sbjct: 1   MTARQVYVPVAALLIFLAAWEALVWVMGWPTFKMAAPSDLPPAYAKY--WELFLTMGWQT 58

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R ++ ++++++F      +   SR +   L P+L    ++P    +    + F+  + 
Sbjct: 59  LWRTVAGLLLAVVFGTALGMVMGFSRTMRDALYPLLVGFNAVPKATVVPIVALMFVGWH- 117

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +   +   F    + +  S+   L  +  +  ++ RS   S    FW + +P +
Sbjct: 118 ------DFNTVLIAFMISFFPIAVSVSIGLSTLEPEYRDILRSLGASQSTIFWKIALPKT 171

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P     + +S++  +      E++          G+G+         D   +   ++ +
Sbjct: 172 LPEFFGALKVSVTLAFIGTNLMEIVS-----PHGRGLGALFDSGKTNSDYPLMFAVLIAL 226

Query: 249 LGVIFLYDQL---LFRPMIVWSNK 269
             +  L   +   L +    W+++
Sbjct: 227 ALLGILLYYIVVALEKTFAGWADR 250


>gi|296330439|ref|ZP_06872919.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675985|ref|YP_003867657.1| choline ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|1109687|gb|AAB01535.1| ProZ [Bacillus subtilis]
 gi|296152442|gb|EFG93311.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414229|gb|ADM39348.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 223

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 19/205 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       L A  RRL   +  + +++Q+IP L  L   ++    
Sbjct: 23  GRHFLMSVYGVLFAAVVGVPVGILIAHYRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +
Sbjct: 83  G--------ANTVIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 135 PLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAG 187

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
            T   V+ +   L+    + W  +F
Sbjct: 188 ATPTAVMAIGADLI----MAWIERF 208



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ A+++ +PVGI I     +S+ +     ++   PA     +++  +         
Sbjct: 30  VYGVLFAAVVGVPVGILIAHYRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   +   +   ++L 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILA 186


>gi|293376206|ref|ZP_06622451.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645193|gb|EFF63258.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 272

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++  +V +II +   + + I + +   ++    PF  +L A P     P+
Sbjct: 71  GEIFKHLGISLYETIVGLIIGTCSGLFIAICLWWSEKLAKIFDPFLVVLNALPKTALAPI 130

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V        +   +  I  T    + +     S    D  ++  SF  + ++    
Sbjct: 131 LIVWVGTGVKGIVVISIITSIAVT----ILSAYNYFSTVDEDKIKLMKSFGASKFQILTK 186

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP      +       G  W   IV E  +         GLG  I    +  +   V+
Sbjct: 187 LVLPSNTSNMINLLKINIGMVWVGVIVGEFIA------SRAGLGYLIVYGGQVFNLSLVM 240

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L++    L + + L
Sbjct: 241 MGILVLAICTLLMYQLL 257



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           IF L+AF++   +   L        + P  + +I+   +    + ++   +    +  ++
Sbjct: 30  IFLLVAFLIFWEVGAQLGFIDDFLFSKPSAVWNILVKYVSNGEIFKHLGISLYETIVGLI 89

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I        A     S +L  +  P L ++ ++P        +V+      G V+ + + 
Sbjct: 90  IGTCSGLFIAICLWWSEKLAKIFDPFLVVLNALPKTALAPILIVWVGTGVKGIVVISIIT 149

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +I             S Y     +  D  ++ +SF  S +Q    L +P +   ++  + 
Sbjct: 150 SIAV--------TILSAYNYFSTVDEDKIKLMKSFGASKFQILTKLVLPSNTSNMINLLK 201

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   W  V+  E I          G+G  I    +  +L  ++  +L +     L  Q
Sbjct: 202 INIGMVWVGVIVGEFIA------SRAGLGYLIVYGGQVFNLSLVMMGILVLAICTLLMYQ 255

Query: 258 LL 259
           LL
Sbjct: 256 LL 257


>gi|317130903|ref|YP_004097185.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315475851|gb|ADU32454.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 249

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 74/240 (30%), Gaps = 10/240 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +N+    +   +  ++ I W      + +     S   I+          ++     T+ 
Sbjct: 2   KNWKDFIAPTVIVLIVLIAWEISAKAIGMAFILPSPTQIIVRLWELRGSLLLVHMPATLT 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            ++  + ++  + + + + +     +   + P        P     P+ V    Y     
Sbjct: 62  VILTGLSLSIFLGVGLAVLMNVSKTLEKALYPIIISSQTIPVIALAPIFVLWFGYS---- 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 + +  T + I  N   G  +   D K++  +        +  + +P   P++ +
Sbjct: 118 IWSKVAVTLLITFFPITVNTYDGLKSSNKDLKDLLLTMGARKRDIFFKLDIPSALPHFYS 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   +   + + E            GLG +      +     V   +L++    + 
Sbjct: 178 GLKVAVTLSVIGAAIGEWLG------AQAGLGYFSRRMMTQFDGAGVFAPILLLSLIGIT 231



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 90/232 (38%), Gaps = 14/232 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  VL+   I+    G+         + +    L    L  +   T   +L+ + +S+ 
Sbjct: 13  IVLIVLIAWEISAKAIGMAFILPSPTQIIVRLWELRGSLLLVHMPATLTVILTGLSLSIF 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L   S+ L   L PI+   Q+IP++      V++F          +  + +  
Sbjct: 73  LGVGLAVLMNVSKTLEKALYPIIISSQTIPVIALAPIFVLWFGY--------SIWSKVAV 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +T + Y  L +  +DL+++  +        F+ L +P ++P     + ++++
Sbjct: 125 TLLITFFPITVNTYDGLKSSNKDLKDLLLTMGARKRDIFFKLDIPSALPHFYSGLKVAVT 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                V+ +    +G+ +    G+G +    + + D   +   +L +  +  
Sbjct: 185 LS---VIGA---AIGEWLGAQAGLGYFSRRMMTQFDGAGVFAPILLLSLIGI 230


>gi|312147768|gb|ADQ30427.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           JD1]
          Length = 478

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   S+    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ +    ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V  +    L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|293602166|ref|ZP_06684617.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819436|gb|EFF78466.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 273

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 14/213 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +  +L    L  +   T   ML  ++I            A+S  L  VL 
Sbjct: 55  LPAPSAVATTLWSSLTSGYLWPHIGATLAEMLLGLLIGGAAGLGLGVALAESALLDRVLK 114

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q +P L      V++F       V+   L   F         +  +   SL  +
Sbjct: 115 PYVIVSQVVPKLALAPLFVLWFGFGMAPTVVMTALICFF--------PLMENTLTSLRQV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  ++ R    +  Q    L +P  +PG++  + +++       V  E I        
Sbjct: 167 DPNRLQLFRMLGATRAQVLLRLKLPSGLPGILAGLRVALVLALVGAVVGEFIGAS----- 221

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             G+G+ I  A    D   +  A++ +  +  L
Sbjct: 222 -RGLGAVIIAAQGMMDTPLMFAALVAIAAIGLL 253



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 17/173 (9%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   ++P+  +    P     PL V    +          ++      + ++ N + 
Sbjct: 106 SALLDRVLKPYVIVSQVVPKLALAPLFVLWFGFG----MAPTVVMTALICFFPLMENTLT 161

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                  +  ++      T  +    + LP   P  + G   A   A   ++V E     
Sbjct: 162 SLRQVDPNRLQLFRMLGATRAQVLLRLKLPSGLPGILAGLRVALVLALVGAVVGEFIG-- 219

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA-------LNRFLWHP 576
                + GLGA I  +      P +   ++ +    L        L R L  P
Sbjct: 220 ----ASRGLGAVIIAAQGMMDTPLMFAALVAIAAIGLLGYQATLMLERRLLRP 268


>gi|288935430|ref|YP_003439489.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|290509477|ref|ZP_06548848.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|288890139|gb|ADC58457.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
 gi|289778871|gb|EFD86868.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 271

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQY-ASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+ +     D +   P       L       +  R+L+ + +S L        A   
Sbjct: 44  LLPGLSQMVAAIDRMAFTPDKRSGEYLLWADTLISLSRLLTGLAVSSLIGLGIGIAAGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P++ ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PMYRAALSPLMTVVSMIPPLAILPVLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q    IP +L   +++   + W     + +P  +  L+ ++ + +   W F++++E I
Sbjct: 156 LEQRAKEIPAELFIKAQTLGANSWTLVLRVVLPQLLSRLITSLRLLLGSAWLFLISAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  I+  ++ +  + +L D  L
Sbjct: 216 S------ATAGLGYRIFLVRRYMAMDVIIPYVIWITLLAWLMDLAL 255



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 72/192 (37%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I++ R++  + ++S+I + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  LISLSRLLTGLAVSSLIGLGIGIAAGVFPMYRAALSPLMTVVSMIPPLAILPVLFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +     W     ++LP + 
Sbjct: 136 DELSK----VMLIVIGITPMLARDLEQRAKEIPAELFIKAQTLGANSWTLVLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +T      G AW   I +E  S       T GLG  I       +   ++  V+ + 
Sbjct: 192 SRLITSLRLLLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVIIPYVIWIT 245

Query: 564 CFVLALNRFLWH 575
                ++  L  
Sbjct: 246 LLAWLMDLALRQ 257


>gi|283783130|ref|YP_003373884.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298253892|ref|ZP_06977479.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis 5-1]
 gi|283441189|gb|ADB13655.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297532035|gb|EFH71010.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis 5-1]
          Length = 263

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 86/242 (35%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P +F ++  ++         + I E  +P            + +L   A  TT   +
Sbjct: 12  KYLPTVFSVIVLLVFWQY-ACEYYKISENLIPTPSSIAQSTADALPTLLPAALITTQETV 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               I+++   +   +    + +   L P+L   Q++P++      +++F     GK   
Sbjct: 71  IGFSIAIVVGILLGVIFHVCKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEISGK--- 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I  +    ++ +     + L  +P    +V+ +   S     W++ +  +   + 
Sbjct: 128 -----IVIVMVFSMFPIAVQTIRGLDAVPSFYTDVALTCGASRTWTLWHVKLRVAARQIF 182

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +     +E +   D      G+G ++  A        I  A + ++ +  
Sbjct: 183 GGIRISAAYVFGTASTAEYLGAKD------GLGIWLQFAYNSFRTPLIFSATIVIIILTA 236

Query: 254 LY 255
           L 
Sbjct: 237 LL 238



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L +FW        I          +   T   +  ++    IT    V+   IA ++ I
Sbjct: 22  VLLVFWQYACEYYKISENLIPTPSSIAQSTADALPTLLPAALITTQETVIGFSIAIVVGI 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+       + S + P        P     P+ +    +          ++++  + +
Sbjct: 82  LLGVIFHVCKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEISGK----IVIVMVFSMF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I    I G  A P+ + +VA +   +      ++ L         G   +    +  + 
Sbjct: 138 PIAVQTIRGLDAVPSFYTDVALTCGASRTWTLWHVKLRVAARQIFGGIRISAAYVFGTAS 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            GLG ++  +      P +    +++      L
Sbjct: 198 TAEYLG------AKDGLGIWLQFAYNSFRTPLIFSATIVIIILTALL 238


>gi|255655933|ref|ZP_05401342.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
 gi|296450645|ref|ZP_06892398.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP08]
 gi|296879238|ref|ZP_06903233.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
 gi|296260489|gb|EFH07331.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP08]
 gi|296429781|gb|EFH15633.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
          Length = 256

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 85/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + I W  VV  + +          + +  ++D   +     +T+   V+  I+A II +
Sbjct: 22  FILILWQSVVGVLEVPQYILPTPVDIINVFFKDYQNLSMHSVVTIGEAVLGFIVAIIISL 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI + F   I   + P   +    P  +  PL +    +  +       L+++    +
Sbjct: 82  VIGILMDFVSIIKKCLYPIMLVTQMIPTIIIAPLFMIWFGFGTMPK----VLMVMLTCFF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL + + G      D+  +  + +      + ++  P     + +G   +   A  A+ 
Sbjct: 138 PILISFVDGIENIDKDYLNLFKTMNSNKVNTFIHLKFPMAMDKFFSGLKISATYAVMAAT 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E          T GLG Y+  S    +  +V    +++  F L     +
Sbjct: 198 VAEWLGG------TKGLGVYMLRSKSAYALDKVFASTILVVIFSLMFVGIV 242



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 87/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              F+L++    + +  + +  +P  +  I     D  +L  ++  T    +   +++++
Sbjct: 19  TFLFILILWQSVVGVLEVPQYILPTPVDIINVFFKDYQNLSMHSVVTIGEAVLGFIVAII 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            + V   L      +   L PI+ + Q IP +      +++F            +  +  
Sbjct: 79  ISLVIGILMDFVSIIKKCLYPIMLVTQMIPTIIIAPLFMIWFG--------FGTMPKVLM 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + +  S    + NI +D   + ++   +    F +L  P +M      + +S +
Sbjct: 131 VMLTCFFPILISFVDGIENIDKDYLNLFKTMNSNKVNTFIHLKFPMAMDKFFSGLKISAT 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   +E +          G+G Y+  +     L  +  + + ++    ++  ++
Sbjct: 191 YAVMAATVAEWLGG------TKGLGVYMLRSKSAYALDKVFASTILVVIFSLMFVGIV 242


>gi|299822923|ref|ZP_07054809.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Listeria grayi
           DSM 20601]
 gi|299816452|gb|EFI83690.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Listeria grayi
           DSM 20601]
          Length = 217

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 88/211 (41%), Gaps = 15/211 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           HSL     +     L A++++++       +  +S +L  +++ I+ ++Q++P L  L F
Sbjct: 13  HSLLVQTWQHLYISLLAVLLAIVIAVPVGIMLTRSPKLANIVIGIVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L A+ ++F   +  +  + +  +  + ++L E  +   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAVVSLFIYALLPILRNTFIGVKGVDKNLIESGKGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +++A   +    + I   G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSA----VYIIAWATLA---SYIGAGGLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             IL   + +  +  L +  L +     + K
Sbjct: 178 DLILGGAIPVTILALLVEFALGKLEYRMTPK 208



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +++A +I +PVGI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LYISLLAVLLAIVIAVPVGIMLTRSPKLANIVIGIVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  +      IL N   G      +  E      +T W+    + +P      
Sbjct: 83  PAVVSLFIYALL----PILRNTFIGVKGVDKNLIESGKGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYIIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LLVEFALGKLEYRMTPKAIR 211


>gi|121611418|ref|YP_999225.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121556058|gb|ABM60207.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 270

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +P+ A  + + +L    I ++   + A LAA +R    +L  +  ++  +P +  L  
Sbjct: 63  GVIPRRAGYSLMILLQGYAIGIVLAMLLAGLAATTRIGADLLDLLCALLNPLPAIALLPL 122

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  S VW M  +++     +   L  V  ++ L GW+
Sbjct: 123 ALMWFGLGNG--------SLVFVLVHSVVWPMALNVHSGFRAVSPTLRMVGHNYGLRGWR 174

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP + P L+  + +  +  W  ++A+E++    +       G +I     + D+
Sbjct: 175 HTAAILVPAAFPSLLAGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIYERKNQLDI 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
            ++   +L ++ +  + + +LFR
Sbjct: 233 GSVFAGLLGVILIGLIVEGVLFR 255



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 6/149 (4%)

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             PA    PL +      + +    L  +++    W +  NV +G  A     + V  ++
Sbjct: 113 PLPAIALLPLALMWFGLGNGS----LVFVLVHSVVWPMALNVHSGFRAVSPTLRMVGHNY 168

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + GWR    I++P  FP  + G       AW   I +E+             G +I E 
Sbjct: 169 GLRGWRHTAAILVPAAFPSLLAGLKIGWAFAWRTLIAAELVFGVSSGSGGL--GWFIYER 226

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +     V  G+L +    L +   L+ 
Sbjct: 227 KNQLDIGSVFAGLLGVILIGLIVEGVLFR 255


>gi|17547235|ref|NP_520637.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
 gi|17429537|emb|CAD16223.1| putative abc type transporter : periplasmic glycine betaine /
           choline-binding lipoprotein and permease components
           transmembrane [Ralstonia solanacearum GMI1000]
          Length = 520

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 17/239 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTFVYA 87
              +             R           +   L +   R    +  +   + L      
Sbjct: 287 FARVAARFLAGHGMPAARAEAPTRAFLAQLGDGLWRLTRRHLALVAISTGAAALIGVPLG 346

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LAA+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +
Sbjct: 347 LLAAR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------VVPALIALTLYAL 398

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  +    L  +P  L + + +   +  Q+   + +P ++P ++  +  +        
Sbjct: 399 LPIVRNTIVGLEQVPDGLRDAALALGFTPAQRTRVVDLPLALPVILAGIKTAAVISVGTA 458

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +  I  G       G G  IA  +   D  AIL A      V+ L  Q  F     W
Sbjct: 459 TIAAFIGAG-------GYGERIATGLALND-SAILLAGAIPAAVLALLVQGAFEAAEGW 509



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V +    A++I +P+G+    R  I   +     +L   P+     +++  V    +
Sbjct: 328 LALVAISTGAAALIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGV 386

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +   T  +  R + LP   P  
Sbjct: 387 VPAL---IALTLYALLPIVRNTIVGLEQVPDGLRDAALALGFTPAQRTRVVDLPLALPVI 443

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA   +   + ++     G       G G  IA          ++ G +      
Sbjct: 444 LAGIKTAAVISVGTATIAAFIGAG-------GYGERIATGLALNDSAILLAGAIPAAVLA 496

Query: 567 LAL 569
           L +
Sbjct: 497 LLV 499


>gi|154245174|ref|YP_001416132.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159259|gb|ABS66475.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 270

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 75/187 (40%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++ I + VG+ +G  P + S + PF  +++  P     P++   +  
Sbjct: 76  LASLERLFSALAISTAIALLVGVLVGMLPIVRSFLAPFVAMVSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G   Y++ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GEASK----IALITIGITPYLIRDLAMRVEELPREQMIKAQTLGASTWQMALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   + G A+   I +E  +        +GLG  I       +   ++  V  + 
Sbjct: 192 PRLMDGLRLSLGPAFLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVILPYVAWIT 245

Query: 564 CFVLALN 570
              +A++
Sbjct: 246 LLAVAMD 252



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ SA+ IS     +   L      +   L P + ++  +P L  L    
Sbjct: 71  LWTDTLASLERLFSALAISTAIALLVGVLVGMLPIVRSFLAPFVAMVSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       +   +   +  +PR+    +++   S WQ  
Sbjct: 131 IVMGLG--------EASKIALITIGITPYLIRDLAMRVEELPREQMIKAQTLGASTWQMA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + +S+   + F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLMDGLRLSLGPAFLFLIAAEAIASDS------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  +  +  +    D  L R
Sbjct: 237 ILPYVAWITLLAVAMDFALVR 257


>gi|152977144|ref|YP_001376661.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025896|gb|ABS23666.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 268

 Score = 80.7 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 79/189 (41%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +   + + P ++  + P+  +L A P     P+++       
Sbjct: 77  TLLETGVGFILGTVLGTIIATILWWIPLVARVLDPYLVVLNAMPKVALGPIIIVIFG--- 133

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +       ++ +V  +F    W+ ++ +ILP  FP
Sbjct: 134 --PNITSSIAMGVIISIIITILVIYSAFQEVDANYIKVMHTFGANKWQTYQQVILPASFP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G +W   I  E+       +   GLG  I+   +  +F  ++L VL+ C 
Sbjct: 192 TIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNFTLILLSVLLTCV 245

Query: 565 FVLALNRFL 573
               +  F+
Sbjct: 246 LATLMYVFV 254



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T L      ++  +   + AT+      +  VL P L ++ ++P +     
Sbjct: 68  GSLWAHIWTTLLETGVGFILGTVLGTIIATILWWIPLVARVLDPYLVVLNAMPKVALGPI 127

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F       +    + +I              +Y +   +  +  +V  +F  + WQ
Sbjct: 128 IIVIFGPNITSSIAMGVIISIIITILV--------IYSAFQEVDANYIKVMHTFGANKWQ 179

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P S P ++  + +++   W  V+  E++V         G+G  I+   +  + 
Sbjct: 180 TYQQVILPASFPTIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNF 233

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             IL ++L    +  L    +
Sbjct: 234 TLILLSVLLTCVLATLMYVFV 254


>gi|260769331|ref|ZP_05878264.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
 gi|260614669|gb|EEX39855.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio furnissii CIP 102972]
          Length = 266

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 23/264 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRT 68
           R   P +   ++  +++G+  +++   Q        P D++  +    DV  L  +   T
Sbjct: 19  RVTHPMLRVAISTAVILGLWQLIVVAFQMPSFILPAPVDVLHRLVSRYDV--LLAHTWVT 76

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +L  + + L    ++A        L   L+P+L   Q+IP+       +++      
Sbjct: 77  AQEILLGLGLGLSMGLLFALQMLLFEPLKRWLLPLLIASQAIPVFAIAPVLMLWLGYGIA 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+ A +   F + T          Y  L N P    +++++   S WQ   ++ +P +
Sbjct: 137 SKVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAT 188

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L   + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  +
Sbjct: 189 LPTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFIL 242

Query: 249 LGVIFLYDQL---LFRPMIVWSNK 269
             +      +   L +  I W NK
Sbjct: 243 AVLSIALYFITDKLLKTAIPWENK 266



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 104 LKRWLLPLLIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCYDGLR 159

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  R+I LP   P   +G   A   A   ++V E        
Sbjct: 160 NTPTGYLDLAKTMGASKWQLLRHIQLPATLPTLASGIRVAVVIAPIGAVVGEWVG----- 214

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    +AL
Sbjct: 215 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSIAL 249


>gi|317473519|ref|ZP_07932811.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316899030|gb|EFV21052.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 254

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 10/195 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++    +T+    + +++  +I   + + +     +     P   L    P     
Sbjct: 52  DFPLLMANARVTILESFIGLLMGVVIGFLMAVLMDHFDKLYKAFYPLIVLTQTVPTVAIA 111

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+V    Y      L   +L++  T + I  +++ G  +   D   +  S   +  + +
Sbjct: 112 PLLVLWFGYE----MLPKVILIVIVTFFPITVSLLDGFRSADKDTISLMRSMGASKLQIF 167

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RY+  PG    +      +   A   +++SE            GLG Y+    +  +F +
Sbjct: 168 RYVKFPGSLSQFFASLRISASYAVVGAVISEWLGGFE------GLGVYMIRVKKGFAFDK 221

Query: 555 VVLGVLIMCCFVLAL 569
           +   + ++    L L
Sbjct: 222 MFAVIFMISAISLLL 236



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 16/239 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           ++   A ++++ I           +  +P  +  +     D   L   A  T L     +
Sbjct: 12  LWPAAAILVILAIWQTASGTGMVSKFLLPSPVDVVRAFVNDFPLLMANARVTILESFIGL 71

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++ ++  F+ A L     +L     P++ + Q++P +      V++F            L
Sbjct: 72  LMGVVIGFLMAVLMDHFDKLYKAFYPLIVLTQTVPTVAIAPLLVLWFGYEM--------L 123

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +  I     + +T S+     +  +D   + RS   S  Q F Y+  P S+     ++
Sbjct: 124 PKVILIVIVTFFPITVSLLDGFRSADKDTISLMRSMGASKLQIFRYVKFPGSLSQFFASL 183

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +S S      V SE +          G+G Y+    K      +   +  +  +  L 
Sbjct: 184 RISASYAVVGAVISEWLGG------FEGLGVYMIRVKKGFAFDKMFAVIFMISAISLLL 236


>gi|317054032|ref|YP_004118057.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952027|gb|ADU71501.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 245

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 18  NIFDLLAFVLVIGIINILLH--GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           N+F  +  + V+    +L    G+    +P     +  + L    L  +   T   ++ A
Sbjct: 4   NLFSAVYLLAVLLSAWLLARHSGVPNFLLPAPQAVLAALWLHRALLWHHLLFTLAEIVLA 63

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +++ +    V A L A S  +  +L P++   Q+IP+       V++       KV+ A 
Sbjct: 64  LLLGVGAGIVLAVLMAGSPTVRRLLFPLVTASQAIPVFALAPLLVLWLGFGIASKVVVAA 123

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L   F         +  S++  LC  P    E++++   S  + FW +  P ++P     
Sbjct: 124 LILFF--------PLCLSLFDGLCRTPPGWIELAQTLNASRLRLFWQVRWPAALPQFFSG 175

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + M++      VV  E +   +      G+G  +  +    +
Sbjct: 176 LQMAVVLAPIGVVIGEWVGASE------GLGYLMMQSNARLE 211



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+  +V+ +++     I + + +   P +   + P      A P     PL+V  + +
Sbjct: 54  LFTLAEIVLALLLGVGAGIVLAVLMAGSPTVRRLLFPLVTASQAIPVFALAPLLVLWLGF 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  +  +L++ F     +  ++  G    P  + E+A + + +  R +  +  P   
Sbjct: 114 GIASKVVVAALILFF----PLCLSLFDGLCRTPPGWIELAQTLNASRLRLFWQVRWPAAL 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           P + +G   A   A    ++ E          + GLG  + +S  +    
Sbjct: 170 PQFFSGLQMAVVLAPIGVVIGEWVG------ASEGLGYLMMQSNARLETA 213


>gi|222081667|ref|YP_002541032.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726346|gb|ACM29435.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 255

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 10/219 (4%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            A       +        +     + +   +T+   ++   I +I  +  G W   RP +
Sbjct: 35  TAAFFFADPLKVAARIVKWFADGSIWYHLWVTLSESLLAFFIGAIGGVAFGFWFARRPVV 94

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++   P+ +   A P  V  P+          +       L+ F     + FNV  G   
Sbjct: 95  AAVFDPYVKAANALPRVVLAPIFALWFGLGIWSKVALGVTLVFFI----VFFNVYQGVKE 150

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                   A    +   +  R++ +P    +  +   T+ G A   ++V E         
Sbjct: 151 VSPTVLANARMLGMNERQLLRHVYIPSALSWMFSSLHTSVGFAVVGAVVGEYLG------ 204

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              GLG  I ++        V  G+ ++  FVL ++  +
Sbjct: 205 SAAGLGYLIQQAEGVFDVTGVFAGMFVLMAFVLIVDWLM 243



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +       S+  +   T    L A  I  +    +    A+   +  V  P +
Sbjct: 43  PLKVAARIVKWFADGSIWYHLWVTLSESLLAFFIGAIGGVAFGFWFARRPVVAAVFDPYV 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               ++P +       ++F      KV        F +F        F++YQ +  +   
Sbjct: 103 KAANALPRVVLAPIFALWFGLGIWSKVALGVTLVFFIVF--------FNVYQGVKEVSPT 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R   ++  Q   ++ +P ++  +  ++  S+       V  E +          G
Sbjct: 155 VLANARMLGMNERQLLRHVYIPSALSWMFSSLHTSVGFAVVGAVVGEYLG------SAAG 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
           +G  I  A    D+  +   M  ++  + + D L+    R M+ W
Sbjct: 209 LGYLIQQAEGVFDVTGVFAGMFVLMAFVLIVDWLMTKVERHMLRW 253


>gi|218249881|ref|YP_002374742.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           ZS7]
 gi|221217742|ref|ZP_03589210.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           72a]
 gi|226321535|ref|ZP_03797061.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           Bol26]
 gi|218165069|gb|ACK75130.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           ZS7]
 gi|221192419|gb|EEE18638.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           72a]
 gi|226232724|gb|EEH31477.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           Bol26]
          Length = 478

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   S+    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ +    ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V  +    L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|167815902|ref|ZP_02447582.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
          Length = 277

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 70  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 130 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 181

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 182 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 239

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 240 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 270



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 6   AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 65

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 66  GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 122

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 123 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 178

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 179 GLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 236

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 237 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 271


>gi|325840827|ref|ZP_08167191.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325490197|gb|EGC92534.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 273

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++  +V +II +   + + I + +   ++    PF  +L A P     P+
Sbjct: 72  GEIFKHLGISLYETIVGLIIGTCSGLFIAICLWWSEKLAKIFDPFLVVLNALPKTALAPI 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V        +   +  I  T    + +     S    D  ++  SF  + ++    
Sbjct: 132 LIVWVGTGVKGIVVISIITSIAVT----ILSAYNYFSTVDEDKIKLMKSFGASKFQILTK 187

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP      +       G  W   IV E  +         GLG  I    +  +   V+
Sbjct: 188 LVLPSNTSNMINLLKINIGMVWVGVIVGEFIA------SRAGLGYLIVYGGQVFNLSLVM 241

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+L++    L + + L
Sbjct: 242 MGILVLAICTLLMYQLL 258



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           IF L+AF++   +   L        + P  + +I+   +    + ++   +    +  ++
Sbjct: 31  IFLLVAFLIFWEVGAQLGFIDDFLFSKPSAVWNILVKYVSNGEIFKHLGISLYETIVGLI 90

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I        A     S +L  +  P L ++ ++P        +V+      G V+ + + 
Sbjct: 91  IGTCSGLFIAICLWWSEKLAKIFDPFLVVLNALPKTALAPILIVWVGTGVKGIVVISIIT 150

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +I             S Y     +  D  ++ +SF  S +Q    L +P +   ++  + 
Sbjct: 151 SIAV--------TILSAYNYFSTVDEDKIKLMKSFGASKFQILTKLVLPSNTSNMINLLK 202

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   W  V+  E I          G+G  I    +  +L  ++  +L +     L  Q
Sbjct: 203 INIGMVWVGVIVGEFIA------SRAGLGYLIVYGGQVFNLSLVMMGILVLAICTLLMYQ 256

Query: 258 LL 259
           LL
Sbjct: 257 LL 258


>gi|329297691|ref|ZP_08255027.1| binding-protein-dependent transporter inner membrane component
           [Plautia stali symbiont]
          Length = 230

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 6/204 (2%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V     Q+   +      T+   V+  ++A++I   +   +     I + + P+   L
Sbjct: 10  LVVAQSLAQNFPTLFMSLLYTLKITVISFVLATVIGSIIAFLLVQNRFIETALFPYIVFL 69

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++  V    ++  +  +L+      + I+ N   G  +           
Sbjct: 70  QVTPIVAIAPLIIIWVKDTTMSLVVCATLM----AVFPIISNTTQGLRSVSPGLLSYFRL 125

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            H +  +    + +P   PY+      + G +   ++V+E  +        TGL   I +
Sbjct: 126 NHASRLQILIRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAG--TGGTDTGLAYQILQ 183

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           +  + + P +   +L++      L
Sbjct: 184 AGYQLNIPLMFAALLLISLAGFLL 207



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 14/230 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            VP  +V    +  +  +L      T    + + V++ +   + A L  ++R +   L P
Sbjct: 5   LVPSPLVVAQSLAQNFPTLFMSLLYTLKITVISFVLATVIGSIIAFLLVQNRFIETALFP 64

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  +Q  PI+      +++  +     V+ A L A+F I +        +  Q L ++ 
Sbjct: 65  YIVFLQVTPIVAIAPLIIIWVKDTTMSLVVCATLMAVFPIIS--------NTTQGLRSVS 116

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L    R    S  Q    L +P ++P     + +S        V +E +         
Sbjct: 117 PGLLSYFRLNHASRLQILIRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAGTGGTDT- 175

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY----DQLLFRPMIVWSN 268
            G+   I  A  + ++  +  A+L +    FL       L  R +  W  
Sbjct: 176 -GLAYQILQAGYQLNIPLMFAALLLISLAGFLLFALMSWLTRRVLAAWHE 224


>gi|328543913|ref|YP_004304022.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326413657|gb|ADZ70720.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 306

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 84/225 (37%), Gaps = 9/225 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +  V      +        SL  +A  T    L   VI      + A     SR
Sbjct: 76  VLPAPHQVIVEIWDTTVNKAVTSRRSLVYHAGITLSSTLLGFVIGTALGILLAVGIVHSR 135

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L   L+P +   Q+IPIL      +V    +    ++   + + +  F    + +T  M
Sbjct: 136 VLDKSLMPWVISSQTIPILAIAPMIIVVLNAIGISGLLPKAMISTYLSF----FPVTVGM 191

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +      ++ R++  S  Q FW L  P+++P L  +M + ++      +  E+  
Sbjct: 192 VKGLRSPELIHLDLMRTYSASRGQTFWKLRFPYAVPYLFTSMKVGIAASLVGAIVGEL-- 249

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  + G+G+ +         + I  A++T   +  L   L+
Sbjct: 250 ---PTGAVAGLGARLLAGSYYGQTVQIWSALITAAVLAGLLVTLV 291



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 73/196 (37%), Gaps = 5/196 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++  +I + + I + + I     +   + P+       P     P++
Sbjct: 101 SLVYHAGITLSSTLLGFVIGTALGILLAVGIVHSRVLDKSLMPWVISSQTIPILAIAPMI 160

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + +   ++ G  +      ++  ++  +  + +  +
Sbjct: 161 IVVLNAIGISGLLPKAMISTYLSFFPVTVGMVKGLRSPELIHLDLMRTYSASRGQTFWKL 220

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   PY  T        +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 221 RFPYAVPYLFTSMKVGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIWS 275

Query: 558 GVLIMCCFVLALNRFL 573
            ++        L   +
Sbjct: 276 ALITAAVLAGLLVTLV 291


>gi|153955934|ref|YP_001396699.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146348792|gb|EDK35328.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
          Length = 267

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 78/210 (37%), Gaps = 15/210 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT F  ++  ++++ +   + I + +   IS  + P+  +L A P     P+
Sbjct: 68  GTLFTHIGITCFETILGFLLSTALGTLIAIILWWSEFISDILDPYIVVLNALPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V     N    + L+ +  +    +  V+ G      D   +  +F  +  +    
Sbjct: 128 IIFWVG----NGISAIILVTVLISIIVTILTVLNGFKEVDKDKITLLKTFGSSKLQILTN 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 184 LIIPSSVPTLISSLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDTVM 237

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + ++I+     A+   +      +  + LR
Sbjct: 238 VSIIILSILAYAMYASI-----SFAEKKLR 262



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 89/235 (37%), Gaps = 15/235 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80
           L+AF ++  I   L       T     +    I L +  +L  +   T    +   ++S 
Sbjct: 30  LIAFFVLWEIAGDLGWIDPFLTSTPSRMYKNLIALYLEGTLFTHIGITCFETILGFLLST 89

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               + A +   S  +  +L P + ++ ++P +      + +  N     ++   L +I 
Sbjct: 90  ALGTLIAIILWWSEFISDILDPYIVVLNALPKVALAPIIIFWVGNGISAIILVTVLISII 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               + +             + +D   + ++F  S  Q    L +P S+P L+ ++ +++
Sbjct: 150 VTILTVL--------NGFKEVDKDKITLLKTFGSSKLQILTNLIIPSSVPTLISSLKINV 201

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              W  V+  E +V  +      G+G  I    +   L  ++ +++ +  + +  
Sbjct: 202 GLSWVGVIMGEFLVAKE------GLGFLIIYGGQISQLDTVMVSIIILSILAYAM 250


>gi|315282316|ref|ZP_07870750.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria marthii FSL S4-120]
 gi|313614037|gb|EFR87747.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria marthii FSL S4-120]
          Length = 218

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 82/203 (40%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ ++       L  +S R+   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIVVAVPTGILLTRSPRVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISIIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALVVEFALGK 200



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+  ++ +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIVVAVPTGILLTRSPRVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISII 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LVVEFALGKLEYRLTPKAIR 211


>gi|312602692|ref|YP_004022537.1| hypothetical protein RBRH_02812 [Burkholderia rhizoxinica HKI 454]
 gi|312170006|emb|CBW77018.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 217

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 10/206 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            + +   L     +    + +A+  ++L       L  +   L   L+    I+ ++P +
Sbjct: 7   FSNNWQELASLTLQHLALVGTAVGCAILVGVPLGILINRCAWLAGPLLGCATIVLTLPSI 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +        G        AI A+F   +  +  + Y +L N+   + E      
Sbjct: 67  ALFGLMIPLLSRWGAGIGP---APAIVAVFLYSLLPIMRNTYLALRNVDPSIREAGTGIG 123

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G  +  AI
Sbjct: 124 MTRWQRLRLVELPLAVPVIIGGVRTAVVMNIGVMTIAAVIGAG-------GLGELVLRAI 176

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
            + ++  ++   + +  +  + D LL
Sbjct: 177 SQSNMTRLVIGAVLVSVLAIVADLLL 202



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 8/205 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +   +  L    +  V   +  A ++ +P+GI I     ++  +   A ++   P
Sbjct: 5   NYFSNNWQELASLTLQHLALVGTAVGCAILVGVPLGILINRCAWLAGPLLGCATIVLTLP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++  +S +        +++ +   +   I+ N            +E  +   +
Sbjct: 65  SIALFGLMIPLLSRWGAGIGPAPAIVAVFLYSLLPIMRNTYLALRNVDPSIREAGTGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R + LP   P  + G  TA         ++ V   G       GLG  +  +  
Sbjct: 125 TRWQRLRLVELPLAVPVIIGGVRTAVVMNIGVMTIAAVIGAG-------GLGELVLRAIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
           + +   +V+G +++    +  +  L
Sbjct: 178 QSNMTRLVIGAVLVSVLAIVADLLL 202


>gi|300703220|ref|YP_003744822.1| glycine betaine ABC transporter substrate-binding inner membrane
           component [Ralstonia solanacearum CFBP2957]
 gi|299070883|emb|CBJ42185.1| putative ABC-type glycine betaine transport system,
           Substrate-binding inner membrane component [Ralstonia
           solanacearum CFBP2957]
          Length = 520

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 86/240 (35%), Gaps = 24/240 (10%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           + +  L G        D      I      L +   R    + ++   ++L       LA
Sbjct: 290 VASQFLTGHGTPPARVDAPVQAFIARLTDDLWRLTRRHLALVAASTGAAVLIGVPLGLLA 349

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+ RR+   ++ I+ ++Q+IP L  L   +    ++         + A+ A+    +  +
Sbjct: 350 AR-RRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIG-------VVPALIALTLYALLPI 401

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L  +P  L + + +  L+  Q+   + +P ++P ++  +             +
Sbjct: 402 VRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVILAGIKT-----------A 450

Query: 211 EMIVVGDTVIPLP----GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            +I VG   I       G G  IA  +   D  A L A      V+ L  Q  F     W
Sbjct: 451 AVISVGTATIAAFIGAGGYGERIATGLALND-SATLLAGAIPAAVLALLVQGAFEAAEGW 509



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V      A +I +P+G+    R  I   +     +L   P+     +++  V    +
Sbjct: 328 LALVAASTGAAVLIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGV 386

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +  +T  +  R + LP   P  
Sbjct: 387 VPAL---IALTLYALLPIVRNTIVGLEQVPDGLRDAALALGLTPAQRTRVVDLPLALPVI 443

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  TA   +   A+I + + + G+     TGL    + +   G+ P  VL +L+   F
Sbjct: 444 LAGIKTAAVISVGTATIAAFIGAGGYGERIATGLALNDSATLLAGAIPAAVLALLVQGAF 503


>gi|296535923|ref|ZP_06898075.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296263748|gb|EFH10221.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 252

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 81/220 (36%), Gaps = 14/220 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G+    +P      V +      L  +A  T   ++  M+I  L     A L A  R 
Sbjct: 20  LSGVPPFLLPSPWRVGVVLVERWDILWGHALTTLTEIVLGMLIGSLAGMAVALLLAAWRG 79

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               L+P+L   Q+IP+       V++       KV  A +   F + T+         Y
Sbjct: 80  GRRWLLPLLIASQAIPVFAIAPLLVLWLGFGLASKVAMASIIIFFPVATA--------FY 131

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L        +++ +   S +   W + VP ++PGL   + ++ +      VA    VV
Sbjct: 132 DGLRRTEPGWLDLAATMGASRFAVLWRIRVPAALPGLASGLRVAAA------VAPIGAVV 185

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G+ V    G+G  +  A        +  A+  + G+    
Sbjct: 186 GEWVGASAGLGYVMLQANGRSQTDMMFAALAILAGMAMAL 225



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  +V+ ++I S+  + V + +         + P      A P     PL+V  + 
Sbjct: 49  ALTTLTEIVLGMLIGSLAGMAVALLLAAWRGGRRWLLPLLIASQAIPVFAIAPLLVLWLG 108

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +   +     S+++ F     +      G       + ++A++   + +     I +P  
Sbjct: 109 FGLASKVAMASIIIFF----PVATAFYDGLRRTEPGWLDLAATMGASRFAVLWRIRVPAA 164

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P   +G   A   A   ++V E          + GLG  + ++  +     +   + I+
Sbjct: 165 LPGLASGLRVAAAVAPIGAVVGEWVG------ASAGLGYVMLQANGRSQTDMMFAALAIL 218

Query: 563 CCFVLAL 569
               +AL
Sbjct: 219 AGMAMAL 225


>gi|225552180|ref|ZP_03773120.1| phosphate ABC transporter, permease protein [Borrelia sp. SV1]
 gi|225371178|gb|EEH00608.1| phosphate ABC transporter, permease protein [Borrelia sp. SV1]
          Length = 514

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGTYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|326204700|ref|ZP_08194555.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
 gi|325985071|gb|EGD45912.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
          Length = 272

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +   V  +  +++   + + + +   +S  ++P+  +L + P     P+
Sbjct: 74  GQLFHHIGITCWETFVGFVAGTVLGTLIAVVLWWSEFLSKVLEPYLVILNSLPKIALGPI 133

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +  +    + I  +    +  V+ G +A   +  ++  +F  + ++ +  
Sbjct: 134 FIVWFGAGTTSIIIIALAISIVVS----ILEVLNGFTATDEEQIKLVKTFGASKFQVFTK 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ P   P  +       G +W   IV E        +  +GLG  I    +      V+
Sbjct: 190 VVFPANLPVIINSLKINVGLSWVGVIVGEFL------VSKSGLGYLIVYGGQVFKLDLVM 243

Query: 557 LGVLIMCC 564
             V+I+C 
Sbjct: 244 ASVIILCI 251



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 80/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  IV+ +        L  +   T        V   +   + A +   S  L  VL 
Sbjct: 57  TSQPSRIVNTIINLYREGQLFHHIGITCWETFVGFVAGTVLGTLIAVVLWWSEFLSKVLE 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L I+ S+P +      +V+F       +I A   +I              +       
Sbjct: 117 PYLVILNSLPKIALGPIFIVWFGAGTTSIIIIALAISIVVSI--------LEVLNGFTAT 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  ++ ++F  S +Q F  +  P ++P ++ ++ +++   W  V+  E +V       
Sbjct: 169 DEEQIKLVKTFGASKFQVFTKVVFPANLPVIINSLKINVGLSWVGVIVGEFLVSKS---- 224

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +     +  Q +
Sbjct: 225 --GLGYLIVYGGQVFKLDLVMASVIILCIAAGIMYQAV 260


>gi|269968439|ref|ZP_06182454.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269826938|gb|EEZ81257.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 223

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 80/205 (39%), Gaps = 10/205 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L          +  A+ +++L       L  ++ R   V++ +  I+ +IP +   
Sbjct: 15  NLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERAAKVVLYVASIIITIPSIALF 74

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      + A+  +       +  + Y ++ N+   L E +R   ++ 
Sbjct: 75  GLMIPLLSTIGHGI---GYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGMTP 131

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q+   + +P ++P ++  +  ++      +  +  I  G       G+G +I+  I + 
Sbjct: 132 FQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGISQS 184

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D   ++   + +  +  + D  L R
Sbjct: 185 DPRQLIVGAIAVSLLAIIADYGLIR 209



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +FT  ++  +  L    +  V + + +A +  +P+GI I      +  +   A ++   P
Sbjct: 10  NFTIDNLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERAAKVVLYVASIIITIP 69

Query: 430 ANVFFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++  +S   H    +   + ++  +Q  I+ N            +E A    +
Sbjct: 70  SIALFGLMIPLLSTIGHGIGYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGM 129

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T ++  + + +P   P  + G  TA         ++     G       GLG +I+    
Sbjct: 130 TPFQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGIS 182

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +    ++++G + +    +  +  L  
Sbjct: 183 QSDPRQLIVGAIAVSLLAIIADYGLIR 209


>gi|315303154|ref|ZP_07873825.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria ivanovii FSL F6-596]
 gi|313628485|gb|EFR96947.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria ivanovii FSL F6-596]
          Length = 218

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S R+   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPRVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALVVEFALGK 200



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPTGILLTRSPRVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LVVEFALGKLEYRLTPKAIR 211


>gi|297243630|ref|ZP_06927561.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis AMD]
 gi|296888381|gb|EFH27122.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis AMD]
          Length = 263

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 87/242 (35%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P +F ++  ++         + I E  +P     +      + +L   A  TT   +
Sbjct: 12  KYLPTVFSVIVLLVFWQY-ACEYYKISENLIPTPSSIVQSTADALPTLLPAALITTQETV 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               I+++   +   +    + +   L P+L   Q++P++      +++F     GK   
Sbjct: 71  IGFSIAIVVGILLGVIFHVCKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEISGK--- 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I  +    ++ +     + L  +P    +V+ +   S     W++ +  +   + 
Sbjct: 128 -----IVIVMVFSMFPIAVQTIRGLDAVPSFYTDVALTCGASRTWTLWHVKLRVAARQIF 182

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +     +E +   D      G+G ++  A        I  A + ++ +  
Sbjct: 183 GGIRISAAYVFGTASTAEYLGAKD------GLGIWLQFAYNSFRTPLIFSATIVIIILTA 236

Query: 254 LY 255
           L 
Sbjct: 237 LL 238



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L +FW        I          +   T   +  ++    IT    V+   IA ++ I
Sbjct: 22  VLLVFWQYACEYYKISENLIPTPSSIVQSTADALPTLLPAALITTQETVIGFSIAIVVGI 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+       + S + P        P     P+ +    +          ++++  + +
Sbjct: 82  LLGVIFHVCKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEISGK----IVIVMVFSMF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I    I G  A P+ + +VA +   +      ++ L         G   +    +  + 
Sbjct: 138 PIAVQTIRGLDAVPSFYTDVALTCGASRTWTLWHVKLRVAARQIFGGIRISAAYVFGTAS 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            GLG ++  +      P +    +++      L
Sbjct: 198 TAEYLG------AKDGLGIWLQFAYNSFRTPLIFSATIVIIILTALL 238


>gi|289434711|ref|YP_003464583.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170955|emb|CBH27497.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313633270|gb|EFS00134.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria seeligeri FSL N1-067]
 gi|313637858|gb|EFS03189.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria seeligeri FSL S4-171]
          Length = 218

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPAGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIVALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  L +  L +
Sbjct: 178 DLILGGAIPVTILALLVEFALGK 200



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPAGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  +      IL N   G      +  E      +T W+    + +P      
Sbjct: 83  PAIVALFIYALL----PILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LLVEFALGKLEYRLTPKAIR 211


>gi|225028383|ref|ZP_03717575.1| hypothetical protein EUBHAL_02656 [Eubacterium hallii DSM 3353]
 gi|224954295|gb|EEG35504.1| hypothetical protein EUBHAL_02656 [Eubacterium hallii DSM 3353]
          Length = 223

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 14/187 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P  +  I  +  D+ ++ ++AS T       + I +   FV ATL    + L   L P
Sbjct: 1   MLPSPVQVIKALVTDLPTILEHASVTLQEAFYGLCIGVGLAFVMATLMDHFQILNKALYP 60

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           IL I Q+IP +      V++       K        I  +  +  + +T  +     ++ 
Sbjct: 61  ILIITQTIPTIAIAPLLVLWMGFYMAPK--------ITLVVITTFFPITVGLLDGYKSVD 112

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +D  ++ R+   +  Q F+++  P ++P     + +S S      V SE +         
Sbjct: 113 KDSIDLMRAMGATKIQIFFHVKFPTALPQFFSGLKISASYAVVGAVISEWLGG------F 166

Query: 223 PGIGSYI 229
            G+G Y+
Sbjct: 167 EGLGVYM 173



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D+  ++    +T+      + I   +   +   +     ++  + P   +    P    
Sbjct: 14  TDLPTILEHASVTLQEAFYGLCIGVGLAFVMATLMDHFQILNKALYPILIITQTIPTIAI 73

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V  + +Y          L++  T + I   ++ G  +   D  ++  +   T  + 
Sbjct: 74  APLLVLWMGFY----MAPKITLVVITTFFPITVGLLDGYKSVDKDSIDLMRAMGATKIQI 129

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           + ++  P   P + +G   +   A   +++SE            GLG Y+   ++  +F 
Sbjct: 130 FFHVKFPTALPQFFSGLKISASYAVVGAVISEWLGGFE------GLGVYMTRVSKAYAFD 183

Query: 554 EVVLGVLIMCCFVLAL 569
           ++   ++ +    L L
Sbjct: 184 KMFAVIIFIVIISLLL 199


>gi|222148837|ref|YP_002549794.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
 gi|221735823|gb|ACM36786.1| ABC transporter membrane spanning protein (aliphatic sulphonate)
           [Agrobacterium vitis S4]
          Length = 272

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ S + ISLL              L  +L P +  +  +P L  L    
Sbjct: 71  LWTDTLASLTRLFSGLGISLLIALTIGMAIGMLPYLRALLSPFVAAISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E++ I  I       M   +  +   +PR+    + +   S WQ  
Sbjct: 131 IAMGLG--------EVSKITLIVIGVAPIMIRDLALTALALPREQIIKAETLGGSSWQVA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   + F++A+E I          G+G  I L  +   +  
Sbjct: 183 IRVVLPQILPRLITCLRLQLGPAFLFLIAAEAISSDS------GLGYRIFLVRRYLSMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           I   +L +  +  + D LL R
Sbjct: 237 IFPYVLWITLIAVVADVLLDR 257



 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I+ +I + +G+ IG  P++ + + PF   ++  P     P++   +  
Sbjct: 76  LASLTRLFSGLGISLLIALTIGMAIGMLPYLRALLSPFVAAISMVPPLALLPILFIAMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++       L++ G    ++ ++   A A P +    A +   + W+    ++LP I 
Sbjct: 136 GEVSK----ITLIVIGVAPIMIRDLALTALALPREQIIKAETLGGSSWQVAIRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +T      G A+   I +E  S        +GLG  I       S   +   VL + 
Sbjct: 192 PRLITCLRLQLGPAFLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDVIFPYVLWIT 245

Query: 564 CFVLALNRFL 573
              +  +  L
Sbjct: 246 LIAVVADVLL 255


>gi|160879300|ref|YP_001558268.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
 gi|160427966|gb|ABX41529.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
          Length = 254

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 89/250 (35%), Gaps = 15/250 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLG 383
              L+     ++     IF    +  +   I W     + +         ++   ++   
Sbjct: 2   RKKLRNTIRTKLPSFSAIFGILALWQIVSSIGWVPKYMLPSPVDVVLAFVKEFPLLMSHM 61

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+      +++ +++   + +W+   P +     P   +    P     PL+V  + Y
Sbjct: 62  RVTLVEAFFGLLLGTLLGFTIAVWMERFPKVYQAFYPVIVITQTVPTVAIAPLLVLWLGY 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+I  T + I   ++ G  +   D  ++  S   T ++ +R I LP   
Sbjct: 122 G----MAPKIVLIIIVTFFPITVGLLDGFHSADKDAIQLLRSMGATKFQIFRQIKLPSSL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y+      +   +   +++SE            GLG Y+    +  +F ++   + ++ 
Sbjct: 178 SYFFASLKISASYSVVGAVISEWLGG------FHGLGVYMTRVKKSYAFDKMFAVIFLIS 231

Query: 564 CFVLALNRFL 573
              L L + +
Sbjct: 232 AISLLLMKLV 241



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 87/247 (35%), Gaps = 15/247 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   P+   +   + +  I++ +    +    P  +  ++    +   L  +   T +  
Sbjct: 10  RTKLPSFSAIFGILALWQIVSSIGWVPKYML-PSPVDVVLAFVKEFPLLMSHMRVTLVEA 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              +++  L  F  A    +  ++     P++ I Q++P +      V++       K  
Sbjct: 69  FFGLLLGTLLGFTIAVWMERFPKVYQAFYPVIVITQTVPTVAIAPLLVLWLGYGMAPK-- 126

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  I     + +T  +     +  +D  ++ RS   + +Q F  + +P S+   
Sbjct: 127 ------IVLIIIVTFFPITVGLLDGFHSADKDAIQLLRSMGATKFQIFRQIKLPSSLSYF 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++ +S S      V SE +          G+G Y+    K      +   +  +  + 
Sbjct: 181 FASLKISASYSVVGAVISEWLGG------FHGLGVYMTRVKKSYAFDKMFAVIFLISAIS 234

Query: 253 FLYDQLL 259
            L  +L+
Sbjct: 235 LLLMKLV 241


>gi|303252162|ref|ZP_07338330.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247499|ref|ZP_07529544.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648945|gb|EFL79133.1| putative ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306856002|gb|EFM88160.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 249

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   T + +++ + +  L   + A   + S+ L   L+P+L I Q+IP+       V
Sbjct: 50  LWQHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPVFAIAPLLV 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K+    L   F +  +         Y  L N P+   E++++  +      
Sbjct: 110 LWLGYGMASKIAMTVLIIYFPVTAAC--------YDGLRNTPKAYLELAKTLEIKPLAML 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L   + +++S      V     VVG+ V    G+G  +  A        
Sbjct: 162 LLVRLPAALPVLASGLRIAVS------VVPIGAVVGEWVGSSQGLGYLMLHANARMQTDL 215

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +  A+  +L +      +  R +  W
Sbjct: 216 LFAALTVLLLMTLCLYFITDRLLRRW 241



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 14/251 (5%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F +L     +S +L + W  VV G A+          V          +   G +T   +
Sbjct: 2   FKRLFKIGGLSLLLILLWQAVVTGFALPHYMLPAPLTVFEQIVNQFPLLWQHGQVTFIEI 61

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + +  ++ +   + +     ++  + P   +  A P     PL+V  + Y   +   
Sbjct: 62  IAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPVFAIAPLLVLWLGYGMASKIA 121

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++ F     +      G    P  + E+A +  I        + LP   P   +G 
Sbjct: 122 MTVLIIYF----PVTAACYDGLRNTPKAYLELAKTLEIKPLAMLLLVRLPAALPVLASGL 177

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL- 569
             A       ++V E          + GLG  +  +  +     +   + ++    L L 
Sbjct: 178 RIAVSVVPIGAVVGEWVG------SSQGLGYLMLHANARMQTDLLFAALTVLLLMTLCLY 231

Query: 570 ---NRFLWHPL 577
              +R L   L
Sbjct: 232 FITDRLLRRWL 242


>gi|15834863|ref|NP_296622.1| ABC transporter, permease protein, putative [Chlamydia muridarum
           Nigg]
 gi|270285030|ref|ZP_06194424.1| ABC transporter, permease protein, putative [Chlamydia muridarum
           Nigg]
 gi|270289055|ref|ZP_06195357.1| ABC transporter, permease protein, putative [Chlamydia muridarum
           Weiss]
 gi|301336428|ref|ZP_07224630.1| ABC transporter, permease protein, putative [Chlamydia muridarum
           MopnTet14]
 gi|8163173|gb|AAF73540.1| ABC transporter, permease protein, putative [Chlamydia muridarum
           Nigg]
          Length = 587

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 20/194 (10%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             +  VL P+  ++Q +P+       V++F             A I     S  + +  +
Sbjct: 82  PSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGAR--------AVIIPTALSIFFPLALT 133

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           ++Q + N P +L E     + + WQ    L +P  +P +   + ++MS   F  +A E +
Sbjct: 134 IHQGIKNPPEELLEQFTLCQATTWQTLIKLRIPHGLPHIFSGLKIAMSAAGFATIAGEWV 193

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQLLFRPMIVWSNKF 270
                     G+G  I  + +  D+   L  +     +   +F    LL R +  +   F
Sbjct: 194 A------AQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSVFSF---F 244

Query: 271 RLERTTGIYPADSW 284
           R E+++   P   W
Sbjct: 245 RTEKSSRKSPQKQW 258



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 10/150 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P I   + P   L+   P     PL+V    +      +  +L + F     +   + 
Sbjct: 80  LFPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVIIPTALSIFF----PLALTIH 135

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P +  E  +    T W+    + +P   P+  +G   A   A  A+I  E  + 
Sbjct: 136 QGIKNPPEELLEQFTLCQATTWQTLIKLRIPHGLPHIFSGLKIAMSAAGFATIAGEWVA- 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                  +GLG  I ES         + G+
Sbjct: 195 -----AQSGLGILILESRRNYDMAMALAGI 219


>gi|229028226|ref|ZP_04184366.1| ABC transporter, permease protein [Bacillus cereus AH1271]
 gi|228733100|gb|EEL83942.1| ABC transporter, permease protein [Bacillus cereus AH1271]
          Length = 207

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVLIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   +L  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVLIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|312149683|gb|ADQ29754.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           N40]
          Length = 478

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   S+    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ +    ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V  +    L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|199599184|ref|ZP_03212587.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus rhamnosus HN001]
 gi|229551029|ref|ZP_04439754.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|258507072|ref|YP_003169823.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|258538260|ref|YP_003172759.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|199589937|gb|EDY98040.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus rhamnosus HN001]
 gi|229315624|gb|EEN81597.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|257146999|emb|CAR85972.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus GG]
 gi|257149936|emb|CAR88908.1| Binding-protein-dependent transport systems inner membrane
           component [Lactobacillus rhamnosus Lc 705]
 gi|259648442|dbj|BAI40604.1| glycine betaine/carnitine/choline ABC transporter permease
           component [Lactobacillus rhamnosus GG]
          Length = 209

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + ++       L  +  +   V++ +  ++Q++P L  L   +  F          
Sbjct: 25  IALGLGVIVAVPLGILLTRFPKTAKVVIGLASMLQTVPSLALLALMIPLFGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ AI A+F   +  +  + Y  + ++   L + ++   ++  Q    + VP +MP ++
Sbjct: 78  -KVPAIVALFIYSLLPILRNTYIGMEDVDPVLMDAAKGMGMTAMQSIRQVEVPLAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   + +  +  
Sbjct: 137 AGIRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILAL 189

Query: 254 LYDQLLFR 261
           + D LL R
Sbjct: 190 IVDWLLGR 197



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + +  I+ +P+GI +   P  +  +   A +L   P+     L++        
Sbjct: 20  LYISAIALGLGVIVAVPLGILLTRFPKTAKVVIGLASMLQTVPSLALLALMIPLFGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G         + A    +T  +  R + +P   P  
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYIGMEDVDPVLMDAAKGMGMTAMQSIRQVEVPLAMPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG  I           ++ G + +    
Sbjct: 136 MAGIRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILA 188

Query: 567 LALNRFLWH 575
           L ++  L  
Sbjct: 189 LIVDWLLGR 197


>gi|325290917|ref|YP_004267098.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324966318|gb|ADY57097.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 361

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 61/147 (41%), Gaps = 5/147 (3%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPL 436
           +++     T++R++V I++A ++ +P+G  +G+  P  +  + P  ++L          +
Sbjct: 58  HLLGHVLATLWRLMVGIVLAVLLAVPLGAVLGYWLPGAAVALNPLFRILGQINPFSLMTV 117

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +            +++ +   W ++ + I G      D  + A S  ++  R +  
Sbjct: 118 FFLFLGVGEK----AKLVVVTWVAFWPLIHHTITGIQTVEPDLIKAARSMGMSRGRLFLN 173

Query: 497 IILPGIFPYYVTGAITACGGAWNASIV 523
           ++LPG  P  + G  ++        + 
Sbjct: 174 VLLPGTVPAILLGIRSSAVLLLAILVA 200



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 85/249 (34%), Gaps = 11/249 (4%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVIS 79
            +    ++  ++  +         P  +V      L +   L  +   T  R++  +V++
Sbjct: 18  GIFLVAVLWELLPRIGIVNHTFLPPLSVVLQEVAHLILTQHLLGHVLATLWRLMVGIVLA 77

Query: 80  LLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L       +         + L P+  I+  I     +T   ++            E A 
Sbjct: 78  VLLAVPLGAVLGYWLPGAAVALNPLFRILGQINPFSLMTVFFLFLGVG--------EKAK 129

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  +     W +       +  +  DL + +RS  +S  + F  + +P ++P ++  +  
Sbjct: 130 LVVVTWVAFWPLIHHTITGIQTVEPDLIKAARSMGMSRGRLFLNVLLPGTVPAILLGIRS 189

Query: 199 SMSGGWFFVVA-SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           S       +VA   +  +      L   GSY         + A+   +  +   + +  +
Sbjct: 190 SAVLLLAILVAGEMLGGLAGLGWLLHWAGSYYVYPYATAPIFAVGLCISLVGVGLGVSLR 249

Query: 258 LLFRPMIVW 266
            + + ++ W
Sbjct: 250 QIEKGLLFW 258


>gi|86145795|ref|ZP_01064124.1| ABC transporter permease protein [Vibrio sp. MED222]
 gi|85836494|gb|EAQ54623.1| ABC transporter permease protein [Vibrio sp. MED222]
          Length = 271

 Score = 80.4 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 99/249 (39%), Gaps = 16/249 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTT 69
            R++ P +  L++  +++G+  +++   +  +        V I L      L ++   T 
Sbjct: 23  PRQMNPVMRLLISSAVILGLWQMVVVIFEMPSFILPAPAEVFIKLIERYDVLLKHTWVTA 82

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +L  +++ L     +A        L   L+PIL   Q+IP+       +++       
Sbjct: 83  QEILLGLLLGLSMGLFFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIAS 142

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           KV+ A +   F + T          Y  L N P    +++++   S WQ   Y+ +P ++
Sbjct: 143 KVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRYIQLPAAL 194

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L   + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  + 
Sbjct: 195 PTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILA 248

Query: 250 GVIFLYDQL 258
            +      +
Sbjct: 249 VLSISLYFI 257



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 109 LKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  RYI LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSISL 254


>gi|302545095|ref|ZP_07297437.1| ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302462713|gb|EFL25806.1| ABC transporter, permease [Streptomyces himastatinicus ATCC 53653]
          Length = 296

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 88/265 (33%), Gaps = 16/265 (6%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64
                + R + P +   LA +LV  I+             P D+       +   SL  Y
Sbjct: 46  RRTGVMFRGVLPPLVFGLALLLVWDIVTRTGAVAEFYLPGPVDLARYFIDQVLHDSLVDY 105

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T    L+   + +        L A+S      L P +   Q+           V   
Sbjct: 106 TWETVREALAGSGMGIGVALPLGYLIARSDLAAAALQPYIAASQA--------VPAVALA 157

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +    L           + +  +    L  +  ++   +R   +  W   WY+ 
Sbjct: 158 PLLALWLGYGLLPIAVLCALLVFFPILVNTVLGLRGLDPEVLGAARVDGVGWWGMLWYIE 217

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +   ++      V  E ++ GD      G+G  +++  +  D    L++
Sbjct: 218 LPLALPSILAGVRNGLTLSITGAVVGEFVMGGD------GLGQLLSVQRQAAD-TIGLFS 270

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269
            L ML ++      + R +   + +
Sbjct: 271 TLVMLALLAAGLYGVVRLVERLAQR 295



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 88/269 (32%), Gaps = 25/269 (9%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-------- 367
             R     R    +   +    +R   M       +V G+A+ + W  +           
Sbjct: 24  PRREPHSPRPPRVDKTRETGGGRRTGVMFRGVLPPLVFGLALLLVWDIVTRTGAVAEFYL 83

Query: 368 -----VNHFTYQDVLY--VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                +  +    VL+  ++     T+   +    +   + +P+G  I      ++ +QP
Sbjct: 84  PGPVDLARYFIDQVLHDSLVDYTWETVREALAGSGMGIGVALPLGYLIARSDLAAAALQP 143

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +     A PA    PL+   + Y  L   +  +LL+ F     IL N + G      +  
Sbjct: 144 YIAASQAVPAVALAPLLALWLGYGLLPIAVLCALLVFF----PILVNTVLGLRGLDPEVL 199

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A    +  W    YI LP   P  + G       +   ++V E    G       GLG
Sbjct: 200 GAARVDGVGWWGMLWYIELPLALPSILAGVRNGLTLSITGAVVGEFVMGGD------GLG 253

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             ++   +      +   ++++      L
Sbjct: 254 QLLSVQRQAADTIGLFSTLVMLALLAAGL 282


>gi|319761936|ref|YP_004125873.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|317116497|gb|ADU98985.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
          Length = 268

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 100/255 (39%), Gaps = 17/255 (6%)

Query: 20  FDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +   A +L+   +  L   L+G      P D +  +   +         + T  R L+ +
Sbjct: 19  WGAAASLLLFVALWELGAGLYGPLILPTPLDTLATLRGLVRAGEAWPELAITARRALTGL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++         LA  S    M+  P + ++  +P + +L   +++F       V    +
Sbjct: 79  LLAAGVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLAMLWFGAGDGTPVFTVFV 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A +  +F   +        Q    +   L++++R++RL    + + L +P     L    
Sbjct: 139 ACLPVVFIGAL--------QGTRTLDHHLKDMARAYRLPWRMRLFDLYLPHVAAYLFPAW 190

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           + ++   W   V +E++   D      G+G+ +A+     D  A L  +  ++G + + +
Sbjct: 191 ITALGSSWKVAVMAELLATSD------GVGAALAVTRSHLDTSASLAWICAVVGSLLVLE 244

Query: 257 QLLFRPMIVWSNKFR 271
             L  P+     ++R
Sbjct: 245 YALLEPVKRELERWR 259



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 10/266 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           + L  +    P              +    W          I    +  +          
Sbjct: 2   KLLWRLLRGMPAYLWSGWGAAASLLLFVALWELGAGLYGPLILPTPLDTLATLRGLVRAG 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                  IT  R +  +++A+ +   +G+  G     S   +P+  LL   P   +  L 
Sbjct: 62  EAWPELAITARRALTGLLLAAGVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +         P       +       +    + G     +  K++A ++ +        +
Sbjct: 122 MLWFGAGDGTP----VFTVFVACLPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLFDL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP +  Y     ITA G +W  ++++E+ +       + G+GA +A +         + 
Sbjct: 178 YLPHVAAYLFPAWITALGSSWKVAVMAELLA------TSDGVGAALAVTRSHLDTSASLA 231

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583
            +  +   +L L   L  P+     R
Sbjct: 232 WICAVVGSLLVLEYALLEPVKRELER 257


>gi|226953182|ref|ZP_03823646.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. ATCC 27244]
 gi|226836049|gb|EEH68432.1| binding-protein-dependent transport systems inner membrane
           component [Acinetobacter sp. ATCC 27244]
          Length = 266

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +T+   ++    A II   +         + +   P+A L    P     PLV+
Sbjct: 61  LFGSLWVTLKITLLAFACAVIIGTLIAFLFVQSRVVEACFMPYAILFQVTPIVAIAPLVI 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     N  L L +  +    + IL N   G  +       +      + W+    + 
Sbjct: 121 IWIQ----NTTLALVVCAMLVAVFPILTNTTLGLRSVNKGLLNLFQINKASRWQILMRLR 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY+  G   +CG A   ++VSE  +       + GL   I ++  +   P +   
Sbjct: 177 VPNALPYFFGGLRISCGLALIGAVVSEFVAGAGGT--SAGLAYQILQAGFQLDLPLMFAA 234

Query: 559 VLIMCCFVLALNRFL 573
           + ++ C  L L   +
Sbjct: 235 LFLITCTGLGLFVLM 249



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 15/226 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
             DIV   ++  SL   +   TL++ L A   +++   + A L  +SR +    +P   +
Sbjct: 47  PSDIVMALMNQSSLLFGSLWVTLKITLLAFACAVIIGTLIAFLFVQSRVVEACFMPYAIL 106

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            Q  PI+      +++  N          LA +       V+ +  +    L ++ + L 
Sbjct: 107 FQVTPIVAIAPLVIIWIQN--------TTLALVVCAMLVAVFPILTNTTLGLRSVNKGLL 158

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
            + +  + S WQ    L VP ++P     + +S        V SE +          G+ 
Sbjct: 159 NLFQINKASRWQILMRLRVPNALPYFFGGLRISCGLALIGAVVSEFVAGAGGTSA--GLA 216

Query: 227 SYIALAIKEQDLLAILYAMLTM---LGVIFLYDQLLFRPMIV-WSN 268
             I  A  + DL  +  A+  +      +F+   LL R  +  W  
Sbjct: 217 YQILQAGFQLDLPLMFAALFLITCTGLGLFVLMSLLSRVFLRKWHE 262


>gi|313884977|ref|ZP_07818729.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619668|gb|EFR31105.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Eremococcus coleocola ACS-139-V-Col8]
          Length = 212

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++++ +       L A+  +L   ++ + +++Q+IP L  ++  ++    
Sbjct: 26  MRHFLLSIEGVLLAAIVGIPLGILIARYHKLSDWVIGVANVIQTIPSLAMMSIIMLVAGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  +  ++ + S+   ++ +Q+   + +
Sbjct: 86  GAR--------TVIITVFLYSLLPIIKNTYTGMQTLDPNIMDASKGIGMTSFQRLRLVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           P SM  ++  +          +V +  IV   + I   G+G  I       D
Sbjct: 138 PLSMSVIMAGIR-------NALVVAIGIVAIGSFIGSGGLGDIIIRGTNATD 182



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +++A+I+ IP+GI I     +S  +   A ++   P+     +++             +
Sbjct: 35  GVLLAAIVGIPLGILIARYHKLSDWVIGVANVIQTIPSLAMMSIIMLVAGLGART----V 90

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            + +   +   I+ N   G      +  + +    +T ++  R + LP      + G   
Sbjct: 91  IITVFLYSLLPIIKNTYTGMQTLDPNIMDASKGIGMTSFQRLRLVELPLSMSVIMAGIRN 150

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           A   A     +      G       GLG  I   T    
Sbjct: 151 ALVVAIGIVAIGSFIGSG-------GLGDIIIRGTNATD 182


>gi|311069899|ref|YP_003974822.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
 gi|310870416|gb|ADP33891.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
          Length = 217

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 84/206 (40%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   +           + A+++ +L       + A+ ++    ++ I++I+Q++P L
Sbjct: 8   LQTNGGEMLYKTWEHLYISIIAVILGILVAVPLGVVLARMKKGAGTIIGIVNIVQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++GW++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTGWEQIRLVELPLAVPIIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D LL
Sbjct: 173 NLYQPEYIIGGAVPVTILAIIIDYLL 198



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +I+  ++ +P+G+ +      +  I     ++   P+       +  +     
Sbjct: 23  LYISIIAVILGILVAVPLGVVLARMKKGAGTIIGIVNIVQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +TGW   R + LP   P  
Sbjct: 81  --KVPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIGMTGWEQIRLVELPLAVPII 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 IIIDYLL 198


>gi|309798834|ref|ZP_07693096.1| choline transporter [Streptococcus infantis SK1302]
 gi|308117536|gb|EFO54950.1| choline transporter [Streptococcus infantis SK1302]
          Length = 506

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 115 FLT-FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           +L  +++  F+ L+   +    L A+ A+    ++ +  +   +L  I   LEE   +F 
Sbjct: 60  YLPDYSLNGFVGLFIPFMGIGTLPALTALVIYAIFPILENTITALNGIDPSLEEAGIAFG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ W++     +P +MP +V  +          ++ +  +     ++   G+GS+I L I
Sbjct: 120 MTKWERLKKFEIPLAMPVIVSGVRT----ATVMIIGTATLAA---LVGAGGLGSFILLGI 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
             ++   IL   ++   +  L++ +L      W  K +L      + 
Sbjct: 173 DRRNTSLILIGAISSAILAILFNVIL-----KWLEKAKLRTIVSAFA 214



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 66/178 (37%), Gaps = 11/178 (6%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A  + IP+ +++      S      A      P       V   + +  +     L+ L
Sbjct: 32  VAIFLTIPLAVYLNGHKKSSDLG---ATSCRYLPDYSLNGFVGLFIPFMGIGTLPALTAL 88

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I+   + IL N I   +      +E   +F +T W   +   +P   P  V+G  TA  
Sbjct: 89  VIY-AIFPILENTITALNGIDPSLEEAGIAFGMTKWERLKKFEIPLAMPVIVSGVRTATV 147

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + ++ +   G       GLG++I    ++ +   +++G +      +  N  L
Sbjct: 148 MIIGTATLAALVGAG-------GLGSFILLGIDRRNTSLILIGAISSAILAILFNVIL 198


>gi|289628121|ref|ZP_06461075.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649912|ref|ZP_06481255.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330871264|gb|EGH05973.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 271

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q  + +  R+   + IS L        A      G  L P+L +M  +P L  L    
Sbjct: 71  LWQDTASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMVPPLAILPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q    IP +L   +++   S W   
Sbjct: 131 IVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPIELLIKAQTLGASTWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + +L D  L
Sbjct: 237 ILPYVVWITLLAWLMDWGL 255



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 71/187 (37%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++++ + +GI  G  P   + + P   +++  P     P++      
Sbjct: 76  ASSLQRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVMSMVPPLAILPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 GELSK----VMLIVIGITPILARDLEQRAREIPIELLIKAQTLGASTWTLILRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 192 PRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN 570
                ++
Sbjct: 246 LLAWLMD 252


>gi|284163958|ref|YP_003402237.1| binding-protein-dependent transporters inner membrane component
           [Haloterrigena turkmenica DSM 5511]
 gi|284013613|gb|ADB59564.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 299

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 81/259 (31%), Gaps = 17/259 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +R        ++     V  +L   W   V    +          V     +    ++  
Sbjct: 46  VRDRVAPVGKRVGPPALVLVVLLAAWQAAVVATGLPTLLLPSPTDVATALLETYPTLLGD 105

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T       ++   ++   +   + +    +  + P+   L   P     PL+     
Sbjct: 106 AVVTGVTAAAGLLAGGLVGFALAFAMTYSRTATRTLVPYVVALRIAPLIAVAPLLFLWFG 165

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                     +LL+   T + +    + G    P  + ++A S   +    + ++ +P  
Sbjct: 166 RG----IPARALLVATLTVFPMTIAALDGLRETPAAYLDLADSVGASRLETFLFVRVPAA 221

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  V G   A   +   ++V+E  +         GLG  + ++       E    ++++
Sbjct: 222 APSVVAGFKIAATLSVIGAVVAEFVTLR------AGLGYRVFDTATYLETAETYAALVVL 275

Query: 563 CCFV-------LALNRFLW 574
                      +AL R LW
Sbjct: 276 AALGIGFYLVPVALERLLW 294



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 85/247 (34%), Gaps = 15/247 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
               + +R+ P    L+  +       ++  G+    +P        +     +L   A 
Sbjct: 49  RVAPVGKRVGPPALVLVVLLAAWQA-AVVATGLPTLLLPSPTDVATALLETYPTLLGDAV 107

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T +   + ++   L  F  A     SR     LVP +  ++  P++       ++F   
Sbjct: 108 VTGVTAAAGLLAGGLVGFALAFAMTYSRTATRTLVPYVVALRIAPLIAVAPLLFLWFGRG 167

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P + +         + T  V+ MT +    L   P    +++ S   S  + F ++ VP
Sbjct: 168 IPARAL--------LVATLTVFPMTIAALDGLRETPAAYLDLADSVGASRLETFLFVRVP 219

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P +V    ++ +      V +E + +        G+G  +       +      A++
Sbjct: 220 AAAPSVVAGFKIAATLSVIGAVVAEFVTL------RAGLGYRVFDTATYLETAETYAALV 273

Query: 247 TMLGVIF 253
            +  +  
Sbjct: 274 VLAALGI 280


>gi|149910642|ref|ZP_01899279.1| ABC transporter permease protein [Moritella sp. PE36]
 gi|149806269|gb|EDM66245.1| ABC transporter permease protein [Moritella sp. PE36]
          Length = 268

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T   ++  +++ L     +A      + +   L+PIL   Q+IP+       +
Sbjct: 72  LLKHTLVTAQEIVFGLLLGLFMGLFFALQMLLFKPIKHWLLPILIASQAIPVFAIAPVLM 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   F + T          Y  L N P    +++++   + WQ  
Sbjct: 132 LWLGYGMASKIVMAALIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGATKWQLL 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+P L   + +++      V+A    V G+ V    G+G  +  A     +  
Sbjct: 184 RHIQLPASLPTLASGIRVAV------VIAPIGAVAGEWVGSSAGLGYLMLQANARMMIDE 237

Query: 241 ILYAMLTMLGVIFLY 255
           +  A+L +  +  L 
Sbjct: 238 MFAALLILSALSVLL 252



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 10/160 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               I   + P      A P     P+++  + Y   +  +  +L++ F     +     
Sbjct: 103 LFKPIKHWLLPILIASQAIPVFAIAPVLMLWLGYGMASKIVMAALIIFF----PVTTCCY 158

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P  + ++A +   T W+  R+I LP   P   +G   A   A   ++  E    
Sbjct: 159 DGLRNTPTGYLDLAKTMGATKWQLLRHIQLPASLPTLASGIRVAVVIAPIGAVAGEWVG- 217

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 + GLG  + ++  +    E+   +LI+    + L
Sbjct: 218 -----SSAGLGYLMLQANARMMIDEMFAALLILSALSVLL 252


>gi|73661761|ref|YP_300542.1| glycine/betaine ABC transporter ATPase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72494276|dbj|BAE17597.1| ABC-type proline glycine betaine transport system permease
           component [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 211

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++I+++       + +K +R   +++ I  ++Q+IP L  L  
Sbjct: 10  GQLISKTVEHFYISMIALLIAIVVAVPLGIILSKMKRTSNIVLTIAGVLQTIPTLAVLAV 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +L AI A+F   +  +  +    + NI  +L+E + S  ++ +Q
Sbjct: 70  MIPIFGVG--------KLPAIVALFIYVLLPILNNTVLGVKNIDSNLKEAAISMGMTRFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G ++   +   D 
Sbjct: 122 LMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFVFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +  + D LL
Sbjct: 175 LMIVSAAVLVTALALIVDVLL 195



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      S+ +   A +L   P      +++       L
Sbjct: 20  FYISMIALLIAIVVAVPLGIILSKMKRTSNIVLTIAGVLQTIPTLAVLAVMIPIFGVGKL 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G     ++ KE A S  +T ++  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDSNLKEAAISMGMTRFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +     + + ++     G       GLG ++           +V   +++    
Sbjct: 136 LGGIRLSSVYVISWATLASYVGAG-------GLGDFVFNGLNLYDPLMIVSAAVLVTALA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDVLL 195


>gi|241896505|ref|ZP_04783801.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241870227|gb|EER73978.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 520

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 20/171 (11%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A      RR G +++ I  ++Q+IP L  L   + +             + AI A+ 
Sbjct: 53  VPLAIALMNHRRAGELVLQIAGVIQTIPSLAVLGALIPFVGIG--------TVPAIIALV 104

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  L  I  +L E + +F  S   K + + +P +MP ++  + +     
Sbjct: 105 LYAIMPIFQNTYAGLTEIDPNLTEATEAFGFSRPFKLFKIQLPLAMPMILSGLRI----A 160

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-----LLAILYAMLTML 249
              V+ +  +        L    ++I + I+  D     L AIL A+L ++
Sbjct: 161 TVMVIGTATLAALIGGGGLG---TFIMIGIQTNDNAQLLLGAILSALLALI 208



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 51/168 (30%), Gaps = 11/168 (6%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+ I +         +   A ++   P+      ++  V    +   + L L  I    
Sbjct: 53  VPLAIALMNHRRAGELVLQIAGVIQTIPSLAVLGALIPFVGIGTVPAIIALVLYAIM--- 109

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I  N  AG +    +  E   +F  +       I LP   P  ++G   A        
Sbjct: 110 -PIFQNTYAGLTEIDPNLTEATEAFGFSRPFKLFKIQLPLAMPMILSGLRIAT----VMV 164

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I +   +             +I    +     +++LG ++     L  
Sbjct: 165 IGTATLAALIGGGGLG---TFIMIGIQTNDNAQLLLGAILSALLALIF 209


>gi|319938396|ref|ZP_08012791.1| hypothetical protein HMPREF9488_03627 [Coprobacillus sp. 29_1]
 gi|319806484|gb|EFW03148.1| hypothetical protein HMPREF9488_03627 [Coprobacillus sp. 29_1]
          Length = 240

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 100/238 (42%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L+  ++ ++++       P D+   +   L   +  Q    T   ++  + IS L
Sbjct: 8   VVYILLLWQLVAVIVNKEVIVPYPLDVFQRMIDMLTDFNFYQTLFITLSHVIIVVAISAL 67

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A L  +   +   + P+L ++Q+IP + F+   +V+  +L               
Sbjct: 68  IAFVLAYLGYQKPLIDEYVSPLLTMIQAIPNISFIILVLVWVSSLQ---------TVYIV 118

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F      +  +  Q   +I  DL +V   +  + ++K++ + +P   P  +  M  S+S
Sbjct: 119 LFLVVFPLLYNNFIQGFKSIDHDLRDVILLYHPTCFEKYFKVYLPLIRPSFLSGMKSSLS 178

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G    V +E++          G+G  I  +  + D++ +    + ++ +I   D +L
Sbjct: 179 LGVKVAVMAEILAGLPY-----GVGRAINYSRIQFDMVGVFAWTVWLVIMILFIDYIL 231



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 12/235 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V Y+L ++    V      I    +                    IT+  V++++ I+++
Sbjct: 8   VVYILLLWQLVAVIVNKEVIVPYPLDVFQRMIDMLTDFNFYQTLFITLSHVIIVVAISAL 67

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I   +      +P I   + P   ++ A P   F  LV+  VS      +L    +++F 
Sbjct: 68  IAFVLAYLGYQKPLIDEYVSPLLTMIQAIPNISFIILVLVWVS------SLQTVYIVLFL 121

Query: 460 TQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
             + +L+N  I G  +  +D ++V   +H T +  +  + LP I P +++G  ++     
Sbjct: 122 VVFPLLYNNFIQGFKSIDHDLRDVILLYHPTCFEKYFKVYLPLIRPSFLSGMKSSLSLGV 181

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             ++++E+ +         G+G  I  S  +     V    + +   +L ++  L
Sbjct: 182 KVAVMAEILAG-----LPYGVGRAINYSRIQFDMVGVFAWTVWLVIMILFIDYIL 231


>gi|296501204|ref|YP_003662904.1| hydroxymethylpyrimidine transport system permease [Bacillus
           thuringiensis BMB171]
 gi|296322256|gb|ADH05184.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis BMB171]
          Length = 257

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F            L  +  
Sbjct: 76  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGM--------LPKVMV 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 128 VILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|228983634|ref|ZP_04143838.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776119|gb|EEM24481.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 207

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILIGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|316934350|ref|YP_004109332.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315602064|gb|ADU44599.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 292

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 88/249 (35%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++AF LV      +    +     P  I       +   SL   +  T    +   V+  
Sbjct: 47  VVAFFLVWEFGVHMGWISEFLVGKPSGIWLRFETQMLDGSLIVDSGYTLYEAILGFVVGT 106

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   +       S  +  +  P +  + S+P +      +++F            L+ + 
Sbjct: 107 IIGSILGLAMWYSVFVARMTEPFIVALNSVPKIALAPVILLWFGTGL--------LSKVV 158

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + +        + YQ+  +  +DL+ +  S   S  Q F+ + +P S+P ++    +++
Sbjct: 159 LVVSMTALVALIAAYQAAKDSDKDLQSLMISMGGSKHQIFYSVIIPSSLPAIIATFRINI 218

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQ 257
                  V  E I          G+G  +  A    DL ++   +  ++ + F+      
Sbjct: 219 GFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVWVGLFVLMFMCFVLYHGID 272

Query: 258 LLFRPMIVW 266
            L R ++ W
Sbjct: 273 ALERYLLPW 281



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +I     T++  ++  ++ +II   +G+ + +   ++   +PF   L + P     P+
Sbjct: 85  GSLIVDSGYTLYEAILGFVVGTIIGSILGLAMWYSVFVARMTEPFIVALNSVPKIALAPV 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++       L+  + +  +         L      A     D + +  S   +  + +  
Sbjct: 145 ILLWFGTGLLSKVVLVVSMTALVA----LIAAYQAAKDSDKDLQSLMISMGGSKHQIFYS 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P  +       G A   ++V E  S         GLG  +  ++       V 
Sbjct: 201 VIIPSSLPAIIATFRINIGFALVGAVVGEFIS------SKRGLGHLVYNASSLYDLNSVW 254

Query: 557 LGVLIMCCFVLAL 569
           +G+ ++      L
Sbjct: 255 VGLFVLMFMCFVL 267


>gi|317048040|ref|YP_004115688.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949657|gb|ADU69132.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 251

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 15/249 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++R++ P +  +L+ +L+      L   IQ   +P     ++ I  +  SL      T +
Sbjct: 7   VTRKLLPPLVGVLSLILLWEGSIWL-FNIQPFVLPSLHSIVLAIINNGSSLWISMGWTLV 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             LS  V+ LL     A L    R L  +L+P+   + S+P + ++   +++F      K
Sbjct: 66  EALSGFVLGLLAGLALAILMTVFRTLEAMLLPLAVAINSVPTVAWIPLALIWFGMGALSK 125

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           ++   LA  F I  + +          L      +  + RSF  S       L +P ++P
Sbjct: 126 IVLVILAVSFVILVNSL--------HGLKQADPQMINLMRSFGASRLTIMRKLQLPAALP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +V  + + +       + +EM+          GIG  I  + ++ DLL +  A++    
Sbjct: 178 NIVSGLRVGLVRSIIVAIVAEMLG------AYQGIGWTIFQSTQQVDLLTVWAAVVVSSL 231

Query: 251 VIFLYDQLL 259
           V      LL
Sbjct: 232 VSIALYGLL 240



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   ++  +  + + I +     + + + P A  + + P   + PL +       
Sbjct: 63  TLVEALSGFVLGLLAGLALAILMTVFRTLEAMLLPLAVAINSVPTVAWIPLALIWFGMGA 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      +L+I    + IL N + G          +  SF  +     R + LP   P 
Sbjct: 123 LSK----IVLVILAVSFVILVNSLHGLKQADPQMINLMRSFGASRLTIMRKLQLPAALPN 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+G       +   +IV+E+           G+G  I +ST++     V   V++    
Sbjct: 179 IVSGLRVGLVRSIIVAIVAEMLG------AYQGIGWTIFQSTQQVDLLTVWAAVVVSSLV 232

Query: 566 VLALNRFL 573
            +AL   L
Sbjct: 233 SIALYGLL 240


>gi|218232888|ref|YP_002365224.1| putative ABC transporter, permease protein [Bacillus cereus B4264]
 gi|218160845|gb|ACK60837.1| putative ABC transporter, permease protein [Bacillus cereus B4264]
          Length = 257

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIETWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F            L  +  
Sbjct: 76  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGM--------LPKVMV 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 128 VILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 238


>gi|325272568|ref|ZP_08138935.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324102301|gb|EGB99780.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 287

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 102/251 (40%), Gaps = 14/251 (5%)

Query: 23  LAFVLVIGII--NILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMVI 78
            A +LVI ++   +  +   +  +P  +   V +   L    L      + + ++   V+
Sbjct: 41  AALLLVIAVLWEAVARYQSNDLLLPGFLQTAVALWDGLVSGELLAKVGVSLVILIKGYVL 100

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++  F   +LA  ++    +L  +  +   +P +  L   +++F           + + 
Sbjct: 101 GIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLPAIALLPLALLWFGLG--------DNSL 152

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF +  S +W +  + Y     +   L    R++ L G +   Y+ VP ++P ++  + +
Sbjct: 153 IFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLKGLRLVLYILVPAALPSILSGLKI 212

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  W  ++A+E++    +     G+G YI     E     +   +  ++ +  L + L
Sbjct: 213 GWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVEGL 270

Query: 259 LFRPMIVWSNK 269
           +F  +   + +
Sbjct: 271 VFNTLERLTVR 281



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 88/275 (32%), Gaps = 9/275 (3%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           ++ L       +    +   Q    ++ + +L I                  G++     
Sbjct: 14  LQPLLSVPVERQLPLAQRLWQQGWLRKAALLLVIAVLWEAVARYQSNDLLLPGFLQTAVA 73

Query: 373 YQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             D L    ++    +++  ++   ++  ++   +             +     +    P
Sbjct: 74  LWDGLVSGELLAKVGVSLVILIKGYVLGIVLAFGLTSLAVSTQLGRDLLGTLTSMFNPLP 133

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A    PL +        +    L  +++    W +  N  AG        +    ++ + 
Sbjct: 134 AIALLPLALLWFGLGDNS----LIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLK 189

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R   YI++P   P  ++G       AW   I +E+           GLG YI ++  +
Sbjct: 190 GLRLVLYILVPAALPSILSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNE 247

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
               +V  G+ ++    L +   +++ L     R 
Sbjct: 248 LYTDKVFAGLAVVILIGLLVEGLVFNTLERLTVRR 282


>gi|241113026|ref|YP_002972861.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861234|gb|ACS58900.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 284

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----------D 375
            P       + +R   +     F V+  + I      +   V  +              D
Sbjct: 13  SPPGSRPANARRRELALRIAVPFLVITVLIIAWELYVVLSDVPPYILPGPGAVAAAFIND 72

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +     +T     + +++A I  +   I++     I     P A +L   P     P
Sbjct: 73  WGTLAPALWVTTKITFISLMLALIGGVGFAIFLVQSRWIEIAFYPLAVILQVTPIVAISP 132

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++     Y  +  + L +       + IL N++ G  +  ++   +   +  + W+   
Sbjct: 133 LILI----YAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLL 188

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ LP   PY++TG     G A  A++V+E A+          L   + E+  + + P +
Sbjct: 189 FLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRMNIPRL 246

Query: 556 VLGVLIMCCFVLAL 569
              +L++    +A+
Sbjct: 247 FAALLMLSMLGVAI 260



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 14/253 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLP 62
            P    RR       +   V+ + II   L+ +     P  +     +      D  +L 
Sbjct: 18  RPANARRRELALRIAVPFLVITVLIIAWELYVVLSDVPPYILPGPGAVAAAFINDWGTLA 77

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                TT     +++++L+    +A    +SR + +   P+  I+Q  PI+      ++Y
Sbjct: 78  PALWVTTKITFISLMLALIGGVGFAIFLVQSRWIEIAFYPLAVILQVTPIVAISPLILIY 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       ++A +   F    + +  +M Q L ++  +L  +   +  S WQ   +
Sbjct: 138 --------APSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLLF 189

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P + P  +  + +         V +E             +   +  A    ++  + 
Sbjct: 190 LKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRMNIPRLF 247

Query: 243 YAMLTMLGVIFLY 255
            A+L +  +    
Sbjct: 248 AALLMLSMLGVAI 260


>gi|289523667|ref|ZP_06440521.1| glycine betaine/L-proline ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503359|gb|EFD24523.1| glycine betaine/L-proline ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 221

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + +  ++       A+  ++L          +  +   ++V I + +Q++P L  L F 
Sbjct: 19  QILELTTQHLYLTFIAVFFAVLVAVPLGITITRFEKAAGIVVGIANAVQALPSLALLGFL 78

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +                 +I  IF   +  +  + Y  L N+ R + E  R   ++ WQ 
Sbjct: 79  IPILGIG--------SKPSIVMIFLYSLLPIIKNTYTGLTNVDRAILEAGRGMGMTNWQL 130

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  + +S        V +  +     +I   G+G  I   I   +  
Sbjct: 131 MKMVQLPLALPVIMAGIRIS-------AVTAVGLTTIAALIGAGGLGQLIYRGISMVNNR 183

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+   +  + +  + D LL
Sbjct: 184 MIIAGAVPAMILTLVIDFLL 203



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++ L    ++   + +  A ++ +P+GI I      +  +   A  + A P+      +
Sbjct: 19  QILELTTQHLYLTFIAVFFAVLVAVPLGITITRFEKAAGIVVGIANAVQALPSLALLGFL 78

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +       +    +++   +   I+ N   G +       E      +T W+  + +
Sbjct: 79  IPILGIG----SKPSIVMIFLYSLLPIIKNTYTGLTNVDRAILEAGRGMGMTNWQLMKMV 134

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G   +   A   + ++ +   G       GLG  I       +   ++ 
Sbjct: 135 QLPLALPVIMAGIRISAVTAVGLTTIAALIGAG-------GLGQLIYRGISMVNNRMIIA 187

Query: 558 GVLIMCCFVLALNRFL 573
           G +      L ++  L
Sbjct: 188 GAVPAMILTLVIDFLL 203


>gi|289549916|ref|YP_003470820.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus lugdunensis HKU09-01]
 gi|315659455|ref|ZP_07912317.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
 gi|289179448|gb|ADC86693.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus lugdunensis HKU09-01]
 gi|315495438|gb|EFU83771.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
          Length = 211

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 79/201 (39%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K+++   +++ I  ++Q+IP L  L  
Sbjct: 10  SQLVSKTIEHFQISIIALLLAIVIAVPLGILLSKTKKTANIVLTIAGVLQTIPTLAILAL 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI +++ +   S  ++  Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFVYVLLPILNNTILGVKNIDKNVIQAGTSMGMTRLQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G  +   +     
Sbjct: 122 LMKDVQLPLALPMIISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A + +  +  + D LL
Sbjct: 175 PMIITAAILVTAIALIVDFLL 195



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A +I +P+GI +      ++ +   A +L   P      L++           +
Sbjct: 24  IIALLLAIVIAVPLGILLSKTKKTANIVLTIAGVLQTIPTLAILALMIPIFGVGKTPAIV 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L + ++      IL N I G      +  +  +S  +T  +  + + LP   P  ++G 
Sbjct: 84  ALFVYVLL----PILNNTILGVKNIDKNVIQAGTSMGMTRLQLMKDVQLPLALPMIISGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +     + + ++     G       GLG  +         P ++   +++    L ++
Sbjct: 140 RLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIITAAILVTAIALIVD 192

Query: 571 RFL 573
             L
Sbjct: 193 FLL 195


>gi|150377221|ref|YP_001313816.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031768|gb|ABR63883.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 220

 Score = 80.4 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A+ I++           +S+     ++ +  +M ++P +      +     +  G  
Sbjct: 25  VFLAVGIAIATAVPIGIAITQSKSTADTILYLASMMITVPSIALFGLMIPLLSPIGHGI- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A+ A+       +  + Y ++ N+   L E ++   +S WQ+   + +P ++P 
Sbjct: 84  --GYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPV 141

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  +       VV +  +      I   G+G++I+  I + D   ++   L +  +
Sbjct: 142 IMAGVRTA-------VVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLL 194

Query: 252 IFLYDQLL 259
               D  L
Sbjct: 195 AIAADLFL 202



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 8/185 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNP 448
           V + + IA    +P+GI I      +  I   A ++   P+   F L++  +S   H   
Sbjct: 25  VFLAVGIAIATAVPIGIAITQSKSTADTILYLASMMITVPSIALFGLMIPLLSPIGHGIG 84

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   + +I  +Q  I+ N     +      +E A    ++ W+  R + +P   P  + 
Sbjct: 85  YVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPVIMA 144

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA       + ++     G       GLG +I+    +    ++V G L +    +A
Sbjct: 145 GVRTAVVMNIGVTAIAAYIGAG-------GLGTFISRGISQSDPRQLVTGALAVSLLAIA 197

Query: 569 LNRFL 573
            + FL
Sbjct: 198 ADLFL 202


>gi|316934790|ref|YP_004109772.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315602504|gb|ADU45039.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 264

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 75/201 (37%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   ++  +I S+  + VG W   +P +++   P+ +++ A P  V  P+    +   
Sbjct: 65  ITLQESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYVKMVNALPRVVLAPIFTLWLGLG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F   + +      G     +   + A    ++  +  R++  P    
Sbjct: 125 IWSKVALGVTLVFFVVFFNVY----QGVKETSSTLVDNARMLGMSERQMMRHVFWPSALS 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   TA G A   ++V E            GLG  I ++        V  G+ ++  
Sbjct: 181 WMFSSLHTAIGFAVVGAVVGEYLG------AAAGLGYLIQQAEGTFDVAGVFAGMFVLSV 234

Query: 565 FVLALN---------RFLWHP 576
           FV+ ++           +W P
Sbjct: 235 FVILIDLAVSLVERRLLVWRP 255



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 93/253 (36%), Gaps = 23/253 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +  + V  ++  +    +    P       D+   V        + ++   T    L A 
Sbjct: 15  IVALAVWQVLTTVPIAGRLLLPPFFFSTPVDVAKQVIAWFASGMIWKHLWITLQESLLAF 74

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VI  +   +     A+  R+  V  P + ++ ++P +       ++              
Sbjct: 75  VIGSVAGVLVGFWFARQPRVAAVFDPYVKMVNALPRVVLAPIFTLWLGLGI--------W 126

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +    T   + + F++YQ +      L + +R   +S  Q   ++  P ++  +  ++
Sbjct: 127 SKVALGVTLVFFVVFFNVYQGVKETSSTLVDNARMLGMSERQMMRHVFWPSALSWMFSSL 186

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++    F VV +   VVG+ +    G+G  I  A    D+  +   M  +   + L D
Sbjct: 187 HTAIG---FAVVGA---VVGEYLGAAAGLGYLIQQAEGTFDVAGVFAGMFVLSVFVILID 240

Query: 257 Q---LLFRPMIVW 266
               L+ R ++VW
Sbjct: 241 LAVSLVERRLLVW 253


>gi|260459308|ref|ZP_05807563.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034862|gb|EEW36118.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 255

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 102/249 (40%), Gaps = 19/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LLA VL   I   +    +    P  +V ++        L  +   +  R+ +++  ++L
Sbjct: 20  LLAMVLTWQIAASIAAN-RLFPGPVQVVSVLLHEAVRGELLYHLGISLARVAASLGAAIL 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V    A +SRR  + + P + ++ ++P L  +    ++           A+ A + A
Sbjct: 79  IGAVLGYAAGRSRRADVWMRPWIVLLLNMPALITVILIYIWLGL--------ADTALVLA 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +++ N+  ++ +    + +D  E++  +R        Y+ +P   P  +  +   ++
Sbjct: 131 VALNKIPNVVVTIREGAGRLDKDFAEMAELYRFGRAAMLRYVVLPQLAPFFLVTLRNGLA 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
             W  V+ +E++   +      G+G  + +  +  D+  IL   ++   V+   +  L  
Sbjct: 191 LTWKIVLLAELLGRSN------GVGFQLQVYFQNFDVTHILAYAISFGVVMLAIEYGLLV 244

Query: 261 ---RPMIVW 266
              R ++ W
Sbjct: 245 PLERRLLAW 253



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 23/245 (9%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-------------IWLGCITMFRVVVLI 394
           W      +A+ + WQ    I  +  +   + V             ++   I++ RV   +
Sbjct: 14  WQSAAALLAMVLTWQIAASIAANRLFPGPVQVVSVLLHEAVRGELLYHLGISLARVAASL 73

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
             A +I   +G   G        ++P+  LL   PA +   L+   +          L L
Sbjct: 74  GAAILIGAVLGYAAGRSRRADVWMRPWIVLLLNMPALITVILIYIWLGLADT----ALVL 129

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +       ++  +  GA     DF E+A  +        RY++LP + P+++       
Sbjct: 130 AVALNKIPNVVVTIREGAGRLDKDFAEMAELYRFGRAAMLRYVVLPQLAPFFLVTLRNGL 189

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
              W   +++E+        R+ G+G  +    +      ++   +     +LA+   L 
Sbjct: 190 ALTWKIVLLAELLG------RSNGVGFQLQVYFQNFDVTHILAYAISFGVVMLAIEYGLL 243

Query: 575 HPLYL 579
            PL  
Sbjct: 244 VPLER 248


>gi|229846444|ref|ZP_04466552.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 7P49H1]
 gi|229810537|gb|EEP46255.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 7P49H1]
          Length = 245

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 95/234 (40%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L++  +   L        P        +      L Q+   T L +   +++  L
Sbjct: 11  IVGVLLMLWQMVATLGSFPHYIFPSPQAVGQQLFTHAELLWQHTQVTVLEICLGLLLGFL 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  + A L + SR++  +L+PIL I Q+IP+       V++F      K++ + L   F 
Sbjct: 71  FGLISALLLSFSRQISALLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFP 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +         Y  L N P+   +++++F +S  +    + +P ++P     + +++S
Sbjct: 131 VTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V  E +   +      G+G  +  A     +  +  A+L ++ +    
Sbjct: 183 VAPIGTVVGEWVGSSE------GLGYLMIHANARMQVDLMFAALLILVAISLCL 230



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 18/198 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  + + +++  +  +   + + F   IS+ + P   +  A P     PL+V    Y 
Sbjct: 56  VTVLEICLGLLLGFLFGLISALLLSFSRQISALLLPILVISQAIPVFAIAPLLVLWFGYG 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +   L++ F     +      G    P  + ++A +F+I+  R    + LP   P
Sbjct: 116 MASKIVMSVLIIYF----PVTAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALP 171

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + +G   A   A   ++V E          + GLG  +  +  +     +   +LI+  
Sbjct: 172 AFASGLRIAVSVAPIGTVVGEWVG------SSEGLGYLMIHANARMQVDLMFAALLILVA 225

Query: 565 FVL--------ALNRFLW 574
             L         L+RF+W
Sbjct: 226 ISLCLYFSIDWLLHRFIW 243


>gi|46907655|ref|YP_014044.1| glycine betaine/L-proline ABC transporter permease [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47092717|ref|ZP_00230503.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217964425|ref|YP_002350103.1| OpuCB [Listeria monocytogenes HCC23]
 gi|226224028|ref|YP_002758135.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes Clip81459]
 gi|254824513|ref|ZP_05229514.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|254852530|ref|ZP_05241878.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254932612|ref|ZP_05265971.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|254992611|ref|ZP_05274801.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes FSL J2-064]
 gi|255522455|ref|ZP_05389692.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes FSL J1-175]
 gi|284801813|ref|YP_003413678.1| hypothetical protein LM5578_1568 [Listeria monocytogenes 08-5578]
 gi|284994955|ref|YP_003416723.1| hypothetical protein LM5923_1520 [Listeria monocytogenes 08-5923]
 gi|290894096|ref|ZP_06557069.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|46880923|gb|AAT04221.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018905|gb|EAL09652.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217333695|gb|ACK39489.1| OpuCB [Listeria monocytogenes HCC23]
 gi|225876490|emb|CAS05199.1| Putative glycine betaine/carnitine/choline ABC transporter
           (membrane protein) [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258605838|gb|EEW18446.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|284057375|gb|ADB68316.1| hypothetical protein LM5578_1568 [Listeria monocytogenes 08-5578]
 gi|284060422|gb|ADB71361.1| hypothetical protein LM5923_1520 [Listeria monocytogenes 08-5923]
 gi|290556351|gb|EFD89892.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293584171|gb|EFF96203.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|293593752|gb|EFG01513.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|307571010|emb|CAR84189.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes L99]
 gi|313608799|gb|EFR84603.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria monocytogenes FSL F2-208]
 gi|328465474|gb|EGF36703.1| hypothetical protein LM1816_05995 [Listeria monocytogenes 1816]
 gi|332311868|gb|EGJ24963.1| Permease [Listeria monocytogenes str. Scott A]
          Length = 218

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIINVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALVVEFALGK 200



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIINVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LVVEFALGKLEYRLTPKAIR 211


>gi|229491021|ref|ZP_04384854.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
 gi|229322137|gb|EEN87925.1| ABC transporter, permease component [Rhodococcus erythropolis
           SK121]
          Length = 301

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 84/259 (32%), Gaps = 26/259 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH------------------ 370
               Q     R+  +     + ++       AW  + Y+V                    
Sbjct: 27  RAQSQPGRPSRMRALGTFLLYPLLSLAGAVAAWSIVSYLVLSPERRFLLPPPSQVLTKSL 86

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             ++ +  ++    +T    +V  ++A  + +  G+ +     I   + P+A +L   P 
Sbjct: 87  LDWKHLSPMLEALAVTAQVALVGFVVAVAVGVGTGVLMSQAKWIERIVYPYAVVLQVIPI 146

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL      Y         +L+ +    + I+ N   G  +      E+ +    + 
Sbjct: 147 LAIVPLSGLWFGYG----MTARTLVCVLIAAFPIITNTHFGLQSVDRGLHELFTLGRASR 202

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W     + L    P  +TG  TA G     +I+ ++           G+G  +     + 
Sbjct: 203 WDRLVKLELRAAMPAILTGIRTASGLVVVGAIIGDMF----FAKGQPGIGTLLDVYRSRL 258

Query: 551 SFPEVVLGVLIMCCFVLAL 569
              +++  ++I   F + +
Sbjct: 259 QSEDLIAAIVIASVFGVLV 277



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 67/167 (40%), Gaps = 12/167 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L ++++ +  ++ P   ++Q IPIL  +  + ++F      + +   L A F I T    
Sbjct: 123 LMSQAKWIERIVYPYAVVLQVIPILAIVPLSGLWFGYGMTARTLVCVLIAAFPIIT---- 178

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
               + +  L ++ R L E+    R S W +   L +  +MP ++  +  +       VV
Sbjct: 179 ----NTHFGLQSVDRGLHELFTLGRASRWDRLVKLELRAAMPAILTGIRTASGL----VV 230

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              +I         PGIG+ + +         ++ A++       L 
Sbjct: 231 VGAIIGDMFFAKGQPGIGTLLDVYRSRLQSEDLIAAIVIASVFGVLV 277


>gi|262201340|ref|YP_003272548.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262084687|gb|ACY20655.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 287

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 97/276 (35%), Gaps = 20/276 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +   S + +   +  +     +L V    +    +     +     L   W   V     
Sbjct: 18  VRGPSGSRWRRAATTIGLPLVSLAVFLVAWQIAAVSGIWTETFVPRLGTVWDAFVDMSTT 77

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
               +        + + + LY      +T+ RV   ++I   I + +G+ +G    +   
Sbjct: 78  HDGVRGY----ADYFWWEHLY------MTLRRVAAGVVIGVAIGVTLGLAMGTIGWLRRL 127

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P+   L A P   +F L+V  +          L+L  +          V A       
Sbjct: 128 LEPWLTFLRALPPLAYFFLLVIWLGIDEAPKVTLLALAALPPAAVATTAAVSAAPLG--- 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A +           +++P   P   TG   + G A+++ + +E+ +         
Sbjct: 185 -LIEAARALGARRREVITDVVIPSALPETFTGIRLSVGIAYSSVVAAELFNG------IP 237

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  + +++   + P V++G+ ++    L ++  L
Sbjct: 238 GIGGVVKDASNYNNTPVVLVGIALIGLSGLVIDGVL 273



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 78/211 (36%), Gaps = 17/211 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   T  R+ + +VI +               L  +L P L  ++++P L +    V+
Sbjct: 90  WEHLYMTLRRVAAGVVIGVAIGVTLGLAMGTIGWLRRLLEPWLTFLRALPPLAYFFLLVI 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +       KV    LAA+     +    ++ +           L E +R+      +   
Sbjct: 150 WLGIDEAPKVTLLALAALPPAAVATTAAVSAAPLG--------LIEAARALGARRREVIT 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P     + +S+   +  VVA+E+         +PGIG  +  A    +   +
Sbjct: 202 DVVIPSALPETFTGIRLSVGIAYSSVVAAELF------NGIPGIGGVVKDASNYNNTPVV 255

Query: 242 LYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           L  +  +     + D   + +   ++ W  K
Sbjct: 256 LVGIALIGLSGLVIDGVLRAIEHRVVPWRGK 286


>gi|16263254|ref|NP_436047.1| inner-membrane permease [Sinorhizobium meliloti 1021]
 gi|307304427|ref|ZP_07584178.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307318135|ref|ZP_07597571.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|14523927|gb|AAK65459.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306896176|gb|EFN26926.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306902629|gb|EFN33223.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 220

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A+ I++           +S+     ++ +  +M ++P +      +     +  G  
Sbjct: 25  VFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLSPIGHGI- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A+ A+       +  + Y ++ N+   L E ++   +S WQ+   + +P ++P 
Sbjct: 84  --GYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPV 141

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  +       VV +  +      I   G+G++I+  I + D   ++   L +  +
Sbjct: 142 IMAGVRTA-------VVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLL 194

Query: 252 IFLYDQLL 259
               D  L
Sbjct: 195 AIAADLFL 202



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 8/185 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNP 448
           V + + IA    +P+G+ I      +  +   A ++   P+   F L++  +S   H   
Sbjct: 25  VFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLSPIGHGIG 84

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   + +I  +Q  I+ N     +      +E A    ++ W+  R + +P   P  + 
Sbjct: 85  YVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPVIMA 144

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA       + ++     G       GLG +I+    +    ++V G L +    +A
Sbjct: 145 GVRTAVVMNIGVTAIAAYIGAG-------GLGTFISRGISQSDPRQLVTGALAVSLLAIA 197

Query: 569 LNRFL 573
            + FL
Sbjct: 198 ADLFL 202


>gi|323439676|gb|EGA97395.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O11]
 gi|323442659|gb|EGB00286.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O46]
          Length = 211

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +   +D LL
Sbjct: 175 LMIVTATVLVTALALGFDALL 195



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L  +  L
Sbjct: 172 YDPLMIVTATVLVTALALGFDALL 195


>gi|251798894|ref|YP_003013625.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546520|gb|ACT03539.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 250

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           ++F L   I+  L   + +  V         +++   SL  +   T +  L   V++ + 
Sbjct: 12  ISFALGFIILWELAVRLFDVPVYLLPAPSAVLSVIDGSLSSHMLVTLMEALVGFVLANIL 71

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V A +   S+ +   + P+   +++ P++      VV+    Y  KV+ + L   F  
Sbjct: 72  GMVTAVIFVHSKSIEKGVFPLAIALKTTPLVALAPLLVVWMGTGYSSKVVASMLICFF-- 129

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  +  +  + L  I  +  E+  +++ +  + FW L +P S+P +   + +S S 
Sbjct: 130 ------PILVNSVKGLKAIEHEAWELFSTYKGTKAEIFWKLRLPTSLPYVFSALKISSSL 183

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLL 259
               +V +   +VG+ V    G+G  + ++    D   +  A++       L      LL
Sbjct: 184 A---IVGA---IVGEFVGANKGLGYVVLVSSYHMDTPIMFSAIIASAVCGLLLFWGISLL 237

Query: 260 FRPMIVWS 267
            + ++ W 
Sbjct: 238 EKKVVFWQ 245



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   +V  ++A+I+ +   +       I   + P A  L   P     PL+V  + 
Sbjct: 54  MLVTLMEALVGFVLANILGMVTAVIFVHSKSIEKGVFPLAIALKTTPLVALAPLLVVWMG 113

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             + +  +      +    + IL N + G  A  ++  E+ S++  T    +  + LP  
Sbjct: 114 TGYSSKVVAS----MLICFFPILVNSVKGLKAIEHEAWELFSTYKGTKAEIFWKLRLPTS 169

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY  +    +   A   +IV E            GLG  +  S+     P +   ++  
Sbjct: 170 LPYVFSALKISSSLAIVGAIVGEFVG------ANKGLGYVVLVSSYHMDTPIMFSAIIAS 223

Query: 563 CCFVLAL 569
               L L
Sbjct: 224 AVCGLLL 230


>gi|229159527|ref|ZP_04287542.1| ABC transporter, permease protein [Bacillus cereus R309803]
 gi|228623932|gb|EEK80743.1| ABC transporter, permease protein [Bacillus cereus R309803]
          Length = 207

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|227875387|ref|ZP_03993528.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris ATCC 35243]
 gi|227843941|gb|EEJ54109.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris ATCC 35243]
          Length = 266

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 14/241 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +F L+                     P  +           +   Y   T +  L+
Sbjct: 23  VAPAVFGLILLGAWFATTAGGRIPAFILPTPTAVFRAAGELFATPNFWPYLGNTLVSALA 82

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             ++ LLF+   A        L   + P L   Q+IP +      +++           +
Sbjct: 83  GTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWL--------PAS 134

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA +        + +  S    L ++P ++ E ++    + WQ   ++ +P  +P L+ 
Sbjct: 135 WLAIVVLCAIMVFFPILVSTTVGLRHLPVEVLEAAKLDGANTWQLLRHMELPLVLPSLMG 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   ++      V  E+++ G       G+G+ I L     D   +  ++ T+  +   
Sbjct: 195 GIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTLATA 248

Query: 255 Y 255
            
Sbjct: 249 I 249



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   ++  +  +P+   I     +++ +QPF     A PA    PL++  +    
Sbjct: 76  TLVSALAGTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWLPASW 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   +  ++++ F     IL +   G    P +  E A       W+  R++ LP + P 
Sbjct: 136 LAIVVLCAIMVFF----PILVSTTVGLRHLPVEVLEAAKLDGANTWQLLRHMELPLVLPS 191

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       +   ++V E+   G       G+G  I   +       + + +  +C  
Sbjct: 192 LMGGIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTL 245

Query: 566 VLAL 569
             A+
Sbjct: 246 ATAI 249


>gi|218673573|ref|ZP_03523242.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli GR56]
          Length = 268

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 15/222 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +    AF+    +  + L GI+ + +P     +    L+  +L      T    L
Sbjct: 17  RATPALLAGFAFLAAWEL-YVDLSGIKPSILPAPSRILTQGWLNREALISNTWPTLGATL 75

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F FV + L      +   L+PI    Q++P++      V++F          
Sbjct: 76  GGFALSLAFAFVSSILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGL------ 129

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q      RD+ E+  S + S W+ F    +P S+P   
Sbjct: 130 --LPKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPYFF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             + +S++      + +E            G+G YI  A   
Sbjct: 188 AGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNN 223



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 70  TLGATLGGFALSLAFAFVSSILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGL 129

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R   LP   PY
Sbjct: 130 L----PKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPY 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           +  G   +   A   +I +E A          GLG YI  +   
Sbjct: 186 FFAGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNN 223


>gi|206967681|ref|ZP_03228637.1| putative ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|206736601|gb|EDZ53748.1| putative ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|326938164|gb|AEA14060.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 257

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 62  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 121 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 177

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 178 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVI 230

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 231 VTLCLYFI 238



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 89/238 (37%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 16  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 76  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 135 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K      +      ++ V      ++
Sbjct: 188 YSVMGAIIGEWLGASE------GLGVMLTRATKSFLTARVFGVAAIIVIVTLCLYFIV 239


>gi|167738678|ref|ZP_02411452.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
          Length = 277

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 70  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 130 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 181

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 182 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 239

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 240 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 270



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 6   AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 65

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 66  GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 122

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 123 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 178

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 179 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 236

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 237 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 271


>gi|86359445|ref|YP_471337.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CFN 42]
 gi|86283547|gb|ABC92610.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 268

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 17/236 (7%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L GI+ + +P     +V   L+   L      T    L    +SL F F  + L      
Sbjct: 41  LSGIKPSILPAPSRILVQGWLNREGLMSNTWPTLGATLGGFALSLAFAFASSILMDFMPF 100

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L+PI    Q++P++      V++F            L  I  +     + +  ++ 
Sbjct: 101 MRRALLPIFIASQTLPLVAIAPLVVLWFGFGL--------LPKILLVALVTFFPLLVALL 152

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q      RD+ E+  S + S W+ F     P S+P     + +S++      + +E    
Sbjct: 153 QGYEATDRDIAELLNSMKASRWRIFRLARFPSSLPYFFAGLRISITYAVVGAIFAEYAGA 212

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSN 268
                   G+G YI  A        +L A++    +   +F    ++ R ++ W  
Sbjct: 213 AS------GLGIYILNAKNNFRPDLVLAAVIVSALLTLCLFALTLVIQRFVMPWQP 262



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 73  TLGATLGGFALSLAFAFASSILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGL 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R    P   PY
Sbjct: 133 LPK----ILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARFPSSLPY 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G   +   A   +I +E A         +GLG YI  +        V+  V++    
Sbjct: 189 FFAGLRISITYAVVGAIFAEYAG------AASGLGIYILNAKNNFRPDLVLAAVIVSALL 242

Query: 566 VLAL 569
            L L
Sbjct: 243 TLCL 246


>gi|170288251|ref|YP_001738489.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
 gi|170175754|gb|ACB08806.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
          Length = 222

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 89/222 (40%), Gaps = 14/222 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
               +  I       + +  +P+    ++        L  ++  T L   S +VI L+  
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A L    + +  V+ PIL I Q+IPI+      +++F      K        I  + 
Sbjct: 71  MGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK--------IGIVA 122

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +  +    I +D  ++ +  + +  Q + YL +P ++P ++  + +S    
Sbjct: 123 FVTLFPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKIS---A 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            + VV++   V+G+ +    G+G Y+  A+       +  + 
Sbjct: 180 TYAVVSA---VIGEWLGAEKGLGIYMIRAMNTFRADRLFLSG 218



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 72/217 (33%), Gaps = 16/217 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           W   +  + +    +   Y++                ++     T+      ++I  ++ 
Sbjct: 11  WLFFIALIFVWEFSKVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAFSGLVIGLVLG 70

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + + + +     +   + P   +  A P     PLV+                ++ F T 
Sbjct: 71  MGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTK----IGIVAFVTL 126

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N + G      D  ++      T  + +RY++LP   PY ++G   +   A  ++
Sbjct: 127 FPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKISATYAVVSA 186

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           ++ E            GLG Y+  +        + L 
Sbjct: 187 VIGEWLGAEK------GLGIYMIRAMNTFRADRLFLS 217


>gi|160881959|ref|YP_001560927.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
 gi|160430625|gb|ABX44188.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
          Length = 286

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            ++ +  I+A +  + + +       +        +++ + P   F  L +  V   +L+
Sbjct: 93  LKISLGFILAVVTGVLLSLGAYHNVFLKEFFTVAMRVIKSIPVASFVILALLWVRARNLS 152

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + +S LM+      I  NV+ G  +      E+A+ FH++G R  ++I LP + PY+V
Sbjct: 153 --ILISFLMVLPI---IYTNVLKGVESADQGLLEMAAVFHMSGLRKLKFIYLPAVMPYFV 207

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +      G  W + I +EV    +       +G  + E+       E+    +++    +
Sbjct: 208 SACSVGLGFCWKSGIAAEVIGLPNNS-----IGEQLYEAKLYLMTKEMFAWTVVIIGISV 262

Query: 568 ALN 570
              
Sbjct: 263 VFE 265



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 96/234 (41%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  ++++  + +I+++       P  +V  +   +   S     S + L++    +++++
Sbjct: 45  IAIWLILWQVASIVINSNILIASPIQVVTTLAKLIFEKSFWFSISSSFLKISLGFILAVV 104

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + +  A  +  L       + +++SIP+  F+   +++               +I  
Sbjct: 105 TGVLLSLGAYHNVFLKEFFTVAMRVIKSIPVASFVILALLWVRARN---------LSILI 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  ++ + + +  + L E++  F +SG +K  ++ +P  MP  V    + + 
Sbjct: 156 SFLMVLPIIYTNVLKGVESADQGLLEMAAVFHMSGLRKLKFIYLPAVMPYFVSACSVGLG 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             W   +A+E+I + +       IG  +  A        +    + ++G+  ++
Sbjct: 216 FCWKSGIAAEVIGLPNNS-----IGEQLYEAKLYLMTKEMFAWTVVIIGISVVF 264


>gi|75759175|ref|ZP_00739278.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493337|gb|EAO56450.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 258

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 63  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 122 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 179 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 231

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 232 VTLCLYFI 239



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 17  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIRMKDLLLPNTMQTLQEVIIGLFFAIL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 77  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 136 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 189 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 239


>gi|148974933|ref|ZP_01811913.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3]
 gi|145965442|gb|EDK30691.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3]
          Length = 271

 Score = 80.4 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 100/250 (40%), Gaps = 16/250 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETT--VPRDIVDIVPITLDVHSLPQYASRT 68
             R++ P +  +++  +++G+  +++   +  +  +P      + +      L ++   T
Sbjct: 22  HPRQMNPVMRLVISSAVILGLWQMVVVIFEMPSFILPAPAEVFLKLIERYDVLLKHTWVT 81

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +L  +++ L     +A        L   L+PIL   Q+IP+       +++      
Sbjct: 82  AQEILLGLLLGLSMGLFFALQMLMFDPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIA 141

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+ A +   F + T          Y  L N P    +++++   S WQ   ++ +P +
Sbjct: 142 SKVVMAAIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRHIQLPAA 193

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L   + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  +
Sbjct: 194 LPTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFIL 247

Query: 249 LGVIFLYDQL 258
             +      +
Sbjct: 248 AVLSISLYFI 257



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 109 LKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  R+I LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSISL 254


>gi|229195052|ref|ZP_04321827.1| ABC transporter, permease [Bacillus cereus m1293]
 gi|228588281|gb|EEK46324.1| ABC transporter, permease [Bacillus cereus m1293]
          Length = 250

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTLHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VAISIVLGVGLAMLMNASDWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFFKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASDWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F+ L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFFKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|313884651|ref|ZP_07818408.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620110|gb|EFR31542.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 256

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V         ++     IT+  V V + I+ +  I +G+ I +       + PF  +   
Sbjct: 44  VISLLVDQAGFIWEQSLITLQEVAVGLGISLVAGIGLGVLIYYSDWARRALYPFVLISQT 103

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P+ V    Y  L        ++     + ++ +V  G S    D+  +  +  
Sbjct: 104 IPTIALSPIFVMWFGYGMLTK----VAVIFLFCFFPLVVSVYDGLSLTDADYLALFRNMQ 159

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+ +  +      P  ++G   A   A   + + E                YI   +
Sbjct: 160 ASPWQTFYRLEWQMALPSILSGIKLAVIYALMGATIGEWLGGNGGLG------YYIRRMS 213

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
                  V  G+L++    L L  F+
Sbjct: 214 SSLKADGVFAGILVLSLIGLILFGFV 239



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 78/246 (31%), Gaps = 17/246 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTT 69
           +      +  +  +++I  +     G               I+L       + + +  T 
Sbjct: 4   KDFIKQYYPFILVLILISALAEYTVGAGLIPAFIIPQPSQVISLLVDQAGFIWEQSLITL 63

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +   + ISL+       L   S      L P + I Q+IP +      V++F      
Sbjct: 64  QEVAVGLGISLVAGIGLGVLIYYSDWARRALYPFVLISQTIPTIALSPIFVMWFGYGM-- 121

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                 L  +  IF    + +  S+Y  L     D   + R+ + S WQ F+ L    ++
Sbjct: 122 ------LTKVAVIFLFCFFPLVVSVYDGLSLTDADYLALFRNMQASPWQTFYRLEWQMAL 175

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + +++          E +     +        YI           +   +L + 
Sbjct: 176 PSILSGIKLAVIYALMGATIGEWLGGNGGLG------YYIRRMSSSLKADGVFAGILVLS 229

Query: 250 GVIFLY 255
            +  + 
Sbjct: 230 LIGLIL 235


>gi|293379283|ref|ZP_06625429.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|292642079|gb|EFF60243.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 245

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 29  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 89  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 141 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 193

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 194 ALPTALMAIITDWLL 208



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 23  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 83  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 139 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 191

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 192 AGALPTALMAIITDWLL 208


>gi|222055585|ref|YP_002537947.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
 gi|221564874|gb|ACM20846.1| binding-protein-dependent transport systems inner membrane
           component [Geobacter sp. FRC-32]
          Length = 319

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 13/169 (7%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +  I+P  ++L+        P+ +                ++ +   W +LF  I  +  
Sbjct: 89  AEAIEPLLRVLSQVNPFTLMPVFILFFGIGET----AKVAVVAWVCLWPVLFYTITASRH 144

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 + A+S  I+       +I+PG  P    G        +   + +E+   G    
Sbjct: 145 VEAIQIKTAASMGISTVDMMLKVIVPGALPTIFVGIRIGACLTFYILVAAEMLGAG---- 200

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLY 580
              GLG  +  S      P +  G   +      LNRFL      L+ +
Sbjct: 201 --AGLGWLVHNSAMNYLIPRIYAGATFIVVLGFLLNRFLLYLERALFSW 247



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 65/173 (37%), Gaps = 17/173 (9%)

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             + P+L ++  +     +   +++F           E A +  +    +W + F    +
Sbjct: 90  EAIEPLLRVLSQVNPFTLMPVFILFFGIG--------ETAKVAVVAWVCLWPVLFYTITA 141

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
             ++     + + S  +S       + VP ++P +   + +     ++ +VA+EM+  G 
Sbjct: 142 SRHVEAIQIKTAASMGISTVDMMLKVIVPGALPTIFVGIRIGACLTFYILVAAEMLGAGA 201

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
                 G+G  +  +     +  I      ++ + FL ++ L    R +  W 
Sbjct: 202 ------GLGWLVHNSAMNYLIPRIYAGATFIVVLGFLLNRFLLYLERALFSWQ 248


>gi|238927240|ref|ZP_04659000.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
 gi|238884915|gb|EEQ48553.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
          Length = 555

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+ I+++       L  +  R     + +++ + +IP +  L F + +F          
Sbjct: 72  AAIGIAIIVGGTAGILIYRYERAVAPTLGMVNFLYTIPSISMLGFLIPFFGIGNT----- 126

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AAI A+    +  M  + +  L  IP  L E   S   S +     + +P +MP ++
Sbjct: 127 ---AAIIALTIYALLPMVRATHTGLAQIPASLSEAGASLGGSDFYVMTRVQLPLAMPIIM 183

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +             +  +    + I   G+G  I   I   +    +   L +  +  
Sbjct: 184 AGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNPALTIAGSLLIAVLAL 236

Query: 254 LYDQLLFR 261
             D +L R
Sbjct: 237 SADAVLGR 244



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 11/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    ++     I IA I+    GI I       +        L   P+      +
Sbjct: 58  FFLQLMIEHLWISGAAIGIAIIVGGTAGILIYRYERAVAPTLGMVNFLYTIPSISMLGFL 117

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + L++  +      ++     G +  P    E  +S   + +     +
Sbjct: 118 IPFFGIGNTAAIIALTIYALL----PMVRATHTGLAQIPASLSEAGASLGGSDFYVMTRV 173

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G         N + ++   +     +   GLG  I       +    + 
Sbjct: 174 QLPLAMPIIMAGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNPALTIA 226

Query: 558 GVLIMCCFVLALNRFLWH 575
           G L++    L+ +  L  
Sbjct: 227 GSLLIAVLALSADAVLGR 244


>gi|167463273|ref|ZP_02328362.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 255

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/238 (11%), Positives = 69/238 (28%), Gaps = 10/238 (4%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
           + E + +         +L   W   V    I          +    +  +  +      T
Sbjct: 6   WTEMWRKGWPPVGTVILLLFLWQAAVSWFGIESFMLPGPLQIVTELWDQLPRISGHLSFT 65

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   ++   I +   I +   +   P +     P   L    P     PL++    +  L
Sbjct: 66  LEITLIGFAIGTSTGIILACILHLIPGVKQAFYPLLLLSQNIPMIALAPLLMIWFGFGLL 125

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  +++     + I  + + G +               +  + +  +  PG  P  
Sbjct: 126 ----PKVIVITLVCFFPIAVSAMDGFAQADRSIMNYMKMIGASKLQLFTKVEFPGALPSL 181

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +G   +   +   ++++E            G+G Y+  +        V + + I+  
Sbjct: 182 FSGVKISATYSIMGAVIAEWLGSDK------GIGVYMLLAKSSFRTDRVFVSMFIIVI 233



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+ +P +  ++  + +     +   GI+   +P  +  +  +   +  +  + S T    
Sbjct: 11  RKGWPPVGTVILLLFLWQA-AVSWFGIESFMLPGPLQIVTELWDQLPRISGHLSFTLEIT 69

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      + A +      +     P+L + Q+IP++      +++F      KVI
Sbjct: 70  LIGFAIGTSTGIILACILHLIPGVKQAFYPLLLLSQNIPMIALAPLLMIWFGFGLLPKVI 129

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F I  S +               R +    +    S  Q F  +  P ++P L
Sbjct: 130 VITLVCFFPIAVSAM--------DGFAQADRSIMNYMKMIGASKLQLFTKVEFPGALPSL 181

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
              + +S +      V +E +          GIG Y+ LA        +  +M  ++ 
Sbjct: 182 FSGVKISATYSIMGAVIAEWLG------SDKGIGVYMLLAKSSFRTDRVFVSMFIIVI 233


>gi|19703582|ref|NP_603144.1| ABC transporter permease protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19713684|gb|AAL94443.1| ABC transporter permease protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 241

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +        D      +   T L  L  + + ++   + A +      +  ++ P+L
Sbjct: 20  PTPLEIANAFVRDRALFLFHFKITMLEALIGLSLGIIIASLLAIIMDSFETINRIVYPLL 79

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP +      V++       K        I  I  +  + +  S+     +  +D
Sbjct: 80  IFTQTIPTIALAPILVLWLGYDMTPK--------IVLIVINTTFPIVISILDGFRHCDKD 131

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ +    S WQ  +++ +P ++      + +S+S  +   V SE +          G
Sbjct: 132 AIQLLKLMNASRWQILYHVKIPTALTYFYAGLRVSVSYAFISAVVSEWLGG------FEG 185

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +G ++  A K  D   +   ++ +  +  +  +L+ R
Sbjct: 186 LGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKR 222



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ITM   ++ + +  II   + I +     I+  + P        P     P++V  + Y 
Sbjct: 42  ITMLEALIGLSLGIIIASLLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWLGY- 100

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L++  T + I+ +++ G      D  ++    + + W+   ++ +P    
Sbjct: 101 ---DMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALT 157

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+ +++VSE            GLG ++  + +   +  +   ++++  
Sbjct: 158 YFYAGLRVSVSYAFISAVVSEWLGGFE------GLGVFMIRAKKAFDYDTMFAIIILVSA 211

Query: 565 FVLALNRFLWH 575
             L     +  
Sbjct: 212 ISLISMELVKR 222


>gi|289523649|ref|ZP_06440503.1| ABC transporter, taurine uptake transporter family, permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503341|gb|EFD24505.1| ABC transporter, taurine uptake transporter family, permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 247

 Score = 80.0 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 78/226 (34%), Gaps = 10/226 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + + W  VV  + +         IV   T      +     +T   + + + ++  I +P
Sbjct: 13  ILVIWELVVRLLDVPKFILPPPTIVLQTTLLQAPLLAGHALVTALEIGLGLCLSLAISLP 72

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + I +   P I + + PF     A P     PL+V    Y  L+  +  ++++ F     
Sbjct: 73  LSIVMFKHPSIDAALTPFLVASQAIPVFAVAPLLVVWFGYGLLSKIVMATIVIFF----P 128

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +  +  +G      D + +         +  R +  P   P + +G   A   A   +++
Sbjct: 129 LTVSTYSGFKQVDPDLEIIFDLLDAPFRKKMRLLYWPAALPSFFSGLKVAVAVATIGAVL 188

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E            GLG  + +   +     +   ++ +    + L
Sbjct: 189 GEWVG------AQRGLGYLMIQMNARLRTDMLFAALVWLSLMGMGL 228



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 15/237 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +++  ++  LL   +    P  IV    + L    L  +A  T L +   + +SL  + 
Sbjct: 13  ILVIWELVVRLLDVPKFILPPPTIVLQTTL-LQAPLLAGHALVTALEIGLGLCLSLAISL 71

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             + +  K   +   L P L   Q+IP+       VV+F      K++ A +   F    
Sbjct: 72  PLSIVMFKHPSIDAALTPFLVASQAIPVFAVAPLLVVWFGYGLLSKIVMATIVIFF---- 127

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +T S Y     +  DLE +         +K   L  P ++P     + ++++   
Sbjct: 128 ----PLTVSTYSGFKQVDPDLEIIFDLLDAPFRKKMRLLYWPAALPSFFSGLKVAVA--- 180

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              VA+   V+G+ V    G+G  +           +  A++ +  +      L+ R
Sbjct: 181 ---VATIGAVLGEWVGAQRGLGYLMIQMNARLRTDMLFAALVWLSLMGMGLWLLVSR 234


>gi|320534056|ref|ZP_08034600.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133725|gb|EFW26129.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 270

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 83/237 (35%), Gaps = 15/237 (6%)

Query: 16  FPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
            P +    A +++  ++             P  +V  + + L    L   A  T    L 
Sbjct: 21  LPAVVLGAALLIIWQLVAGSGAVPEIFLPSPWAVVTRLWLNLTQAGLGWRAWITLREALL 80

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +++ +F    A    + R     ++P +   Q++P +      V++            
Sbjct: 81  GCLLAAVFALPLAWALYRWRLFSRTVLPYVAASQAVPGIAVAPLMVLWIGYG-------- 132

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  +        + +T ++   L ++  D+ + +R     G +   ++ +P ++P +  
Sbjct: 133 ALPIVVLCAFMVFFPITITVLLGLRSLDADVMDAARLDGAHGLRMLIHMELPMALPAIYT 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +    +      V  E+I+ G+      G+G+ ++      D   +   +  +  +
Sbjct: 193 GLRTGFTLSVTGAVVGELIMGGE------GLGTVLSTQQSRGDTTGVFATITLLCVL 243



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 12/229 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMFRVVVLIIIASII 400
            L I W  V    A+   +    + V    + ++    + W   IT+   ++  ++A++ 
Sbjct: 29  ALLIIWQLVAGSGAVPEIFLPSPWAVVTRLWLNLTQAGLGWRAWITLREALLGCLLAAVF 88

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+   +      S  + P+     A P     PL+V  + Y  L   +  + ++ F  
Sbjct: 89  ALPLAWALYRWRLFSRTVLPYVAASQAVPGIAVAPLMVLWIGYGALPIVVLCAFMVFF-- 146

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I   V+ G  +   D  + A      G R   ++ LP   P   TG  T    +   
Sbjct: 147 --PITITVLLGLRSLDADVMDAARLDGAHGLRMLIHMELPMALPAIYTGLRTGFTLSVTG 204

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++V E+   G       GLG  ++    +G    V   + ++C    ++
Sbjct: 205 AVVGELIMGGE------GLGTVLSTQQSRGDTTGVFATITLLCVLATSI 247


>gi|196250021|ref|ZP_03148716.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
 gi|196210535|gb|EDY05299.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
          Length = 269

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 14/227 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I  +    +  +SL  +   T    +   +I  +   +   L     RL   L P
Sbjct: 56  SSPSAIGKLFIEKIGDYSLLTHTWATLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + AI              +Y S   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVIAIIITTIV--------VYASFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V R+F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 PNYLKVLRTFGATRYQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  I    +  +   +L ++L +  +  L  QL+      WSN+
Sbjct: 222 QGLGYLIIYGFQVFNFTLVLMSLLIVAVLSTLMYQLVAMIEKKWSNR 268



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 92/263 (34%), Gaps = 21/263 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             ++K  R + V +      F  +         +D   F     +      +   Y +  
Sbjct: 17  AALRKERRVIRVWQVALLIAFFAVWEAASHFRWVDPLLFSSPSAIGKLFIEKIGDYSLLT 76

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T+            T+F  ++  II ++    +G  + + P ++  + P+  +  A P 
Sbjct: 77  HTWA-----------TLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDPYLVVFNAMPK 125

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+++  +     +    +  + +          V A       ++ +V  +F  T 
Sbjct: 126 VALGPILIVALGPGFTS----IIAMGVVIAIIITTIVVYASFQEVDPNYLKVLRTFGATR 181

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++ ++  +LP  FP  ++      G AW   I  E        +   GLG  I    +  
Sbjct: 182 YQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFL------VSKQGLGYLIIYGFQVF 235

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           +F  V++ +LI+      + + +
Sbjct: 236 NFTLVLMSLLIVAVLSTLMYQLV 258


>gi|16080435|ref|NP_391262.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311332|ref|ZP_03593179.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315659|ref|ZP_03597464.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221320575|ref|ZP_03601869.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221324859|ref|ZP_03606153.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321312924|ref|YP_004205211.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis BSn5]
 gi|7387982|sp|O34878|OPUCB_BACSU RecName: Full=Glycine betaine/carnitine/choline transport system
           permease protein opuCB
 gi|2271390|gb|AAB63769.1| transmembrane protein [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|2635895|emb|CAB15387.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. subtilis str. 168]
 gi|291485910|dbj|BAI86985.1| glycine betaine/carnitine/choline ABC transporter, membrane protein
           [Bacillus subtilis subsp. natto BEST195]
 gi|320019198|gb|ADV94184.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis BSn5]
          Length = 217

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 81/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           L A+V+ ++          + ++    ++  ++I+Q++P L
Sbjct: 8   LQTNGGELLYKTGEHLYISLIAVVLGIIVAVPLGVALTRMKKGAGAVIGFVNIVQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++GW++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTGWEQIRLVEIPLAIPIIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D +L
Sbjct: 173 NLYQPEYIIGGAVPVTILAIIIDYVL 198



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F   +   +++     ++  ++ +++  I+ +P+G+ +      +  +  F  ++   P
Sbjct: 6   TFLQTNGGELLYKTGEHLYISLIAVVLGIIVAVPLGVALTRMKKGAGAVIGFVNIVQTLP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +       +  +        +   + + F +   IL N   G      +  E      +T
Sbjct: 66  SLAILAFFIPLLGVG----KVPAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIGMT 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           GW   R + +P   P  + G  T+       + ++     G       GLG YI      
Sbjct: 122 GWEQIRLVEIPLAIPIIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNL 174

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                ++ G + +    + ++  L
Sbjct: 175 YQPEYIIGGAVPVTILAIIIDYVL 198


>gi|229089791|ref|ZP_04221046.1| ABC transporter, permease [Bacillus cereus Rock3-42]
 gi|228693416|gb|EEL47122.1| ABC transporter, permease [Bacillus cereus Rock3-42]
          Length = 250

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L I+         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|239828114|ref|YP_002950738.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. WCH70]
 gi|239808407|gb|ACS25472.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. WCH70]
          Length = 269

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I ++    +  HSL  +   T    +   +I  L       L     RL   L P
Sbjct: 56  SSPSAIWNLFAQKIADHSLITHTLVTLFETVLGFIIGTLAGACLGALLWWFPRLSKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVVFNAMPKVALAPILIVALGTGFTSIIAMGVIISVIITTIV--------VYSAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ANYLKVLKTFGATRYQCFKEAVLPSSFPTIISTLKVNVGLSWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++L +  +  +  Q +
Sbjct: 222 QGLGYMIIYGFQVFNFTLVLMSLLVIALLSTVMYQAV 258



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I    +T+F  V+  II ++    +G  + + P +S  + P+  +  A P     P++
Sbjct: 73  SLITHTLVTLFETVLGFIIGTLAGACLGALLWWFPRLSKTLDPYLVVFNAMPKVALAPIL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     +    +  + +  +       V +       ++ +V  +F  T ++ ++  
Sbjct: 133 IVALGTGFTS----IIAMGVIISVIITTIVVYSAFQEVDANYLKVLKTFGATRYQCFKEA 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP  FP  ++      G +W   I  E        +   GLG  I    +  +F  V++
Sbjct: 189 VLPSSFPTIISTLKVNVGLSWVGVITGEFL------VSKQGLGYMIIYGFQVFNFTLVLM 242

Query: 558 GVLIMCCFVLAL 569
            +L++      +
Sbjct: 243 SLLVIALLSTVM 254


>gi|116750910|ref|YP_847597.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116699974|gb|ABK19162.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 283

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 10/166 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G  P + +    F   ++  P     P++                +L+  GT   I   
Sbjct: 112 MGLFPGVRNLSLAFITFVSIIPPLAILPILFIVFGVEET----AKVVLIFIGTFPMITRG 167

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V   A   P +    A +   + +     I+LP I P  +     + G AW   I SE  
Sbjct: 168 VYLAARKIPTEQIFKALTLGASQFAVAYRIVLPQIMPCLIDSTRLSLGAAWLFLIASEAI 227

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       T GLG  I       +   ++  VL +       +R L
Sbjct: 228 A------STDGLGYRIYLVRRYLAMDIIIPYVLWITLLGFLFDRLL 267



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ + +  + +   +          +  + +  +  +  IP L  L    
Sbjct: 83  LWDDTLSSLKRLGTGIGCAAVLALLAGLNMGLFPGVRNLSLAFITFVSIIPPLAILPILF 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E A +  IF      +T  +Y +   IP +    + +   S +   
Sbjct: 143 IVFGVE--------ETAKVVLIFIGTFPMITRGVYLAARKIPTEQIFKALTLGASQFAVA 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P  MP L+ +  +S+   W F++ASE I   D      G+G  I L  +   +  
Sbjct: 195 YRIVLPQIMPCLIDSTRLSLGAAWLFLIASEAIASTD------GLGYRIYLVRRYLAMDI 248

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+  +L +  + FL+D+LL
Sbjct: 249 IIPYVLWITLLGFLFDRLL 267


>gi|99078629|ref|YP_611887.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99035767|gb|ABF62625.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 245

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 14/238 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F L +    + L G+ +  +P  ++       ++  + +    T   +L  +VI +   
Sbjct: 11  VFALFLWQAIVSLTGLPKFILPGPVIVAQAWWDNLAVIAENTLVTAAEVLIGLVIGVALG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A SR   +++ PIL   Q++P+        ++       K+  A L   F   
Sbjct: 71  VLTALHLATSRTARLLVQPILVFTQALPVFALAPILTLWLGFGLWSKIAMAVLIIYF--- 127

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T S +  L   P+   +++R+ + +  +  W++ VP ++P L   + ++    
Sbjct: 128 -----PVTASFFDGLMRTPQGYLDLARTMQATPLRVLWHIRVPAALPSLASGIRLA---- 178

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              V A    V+G+ V    G+G  + LA        +  AMLT+     L   ++ R
Sbjct: 179 --AVYAPIGAVIGEWVGASRGLGYLMLLANGRAKTDLMFAAMLTLGVFSVLLHLVVRR 234



 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 11/255 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++       +      W  +V    +         IV    + ++  +     +T   V+
Sbjct: 1   MKPWPVLAATVFALFLWQAIVSLTGLPKFILPGPVIVAQAWWDNLAVIAENTLVTAAEVL 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + ++I   + +   + +         +QP      A P     P++   + +   +    
Sbjct: 61  IGLVIGVALGVLTALHLATSRTARLLVQPILVFTQALPVFALAPILTLWLGFGLWSKIAM 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++ F     +  +   G    P  + ++A +   T  R   +I +P   P   +G  
Sbjct: 121 AVLIIYF----PVTASFFDGLMRTPQGYLDLARTMQATPLRVLWHIRVPAALPSLASGIR 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A   A   +++ E          + GLG  +  +  +     +   +L +  F + L  
Sbjct: 177 LAAVYAPIGAVIGEWVG------ASRGLGYLMLLANGRAKTDLMFAAMLTLGVFSVLL-H 229

Query: 572 FLWHPLYLYGTRCLR 586
            +   L     R +R
Sbjct: 230 LVVRRLTRDLGRHVR 244


>gi|315181864|gb|ADT88777.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Vibrio furnissii NCTC 11218]
          Length = 266

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 104/264 (39%), Gaps = 23/264 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRT 68
           R   P +   ++  +++G+  +++            P D++  +    DV  L  +   T
Sbjct: 19  RVTHPMLRVAISTAVILGLWQLIVVAFNMPSFILPAPVDVLHRLVSRYDV--LLAHTWIT 76

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +L  + + L    ++A        L   L+P+L   Q+IP+       +++      
Sbjct: 77  AQEILLGLGLGLSMGLLFALQMLLFEPLKRWLLPLLIASQAIPVFAIAPVLMLWLGYGIT 136

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+ A +   F + T          Y  L N P    +++++   S WQ   ++ +P +
Sbjct: 137 SKVVMAAIIIFFPVTTCC--------YDGLRNTPIGYLDLAKTMGASKWQLLRHIQLPAA 188

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L   + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  +
Sbjct: 189 LPTLASGIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFIL 242

Query: 249 LGVIFLYDQL---LFRPMIVWSNK 269
             +  +   +   L +  I W NK
Sbjct: 243 AVLSIVLYFITDKLLKTAIPWENK 266



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 104 LKRWLLPLLIASQAIPVFAIAPVLMLWLGYGITSKVVMAAIIIFF----PVTTCCYDGLR 159

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  R+I LP   P   +G   A   A   ++V E        
Sbjct: 160 NTPIGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG----- 214

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    + L
Sbjct: 215 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSIVL 249


>gi|218895498|ref|YP_002443909.1| putative ABC transporter, permease protein [Bacillus cereus G9842]
 gi|218545911|gb|ACK98305.1| putative ABC transporter, permease protein [Bacillus cereus G9842]
          Length = 255

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 60  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 119 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 176 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 228

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 229 VTLCLYFI 236



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 14  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 74  LGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 133 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 186 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 236


>gi|148252824|ref|YP_001237409.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146404997|gb|ABQ33503.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 262

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 6/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E F+++ +   V  ++   W       A+ +        +     Q    ++    +T+ 
Sbjct: 4   EAFIRIAAPLGVGIVMVGLWEIGFRLAAVPVYLFPKPSDIVASFMQHGPALLRALLVTLR 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +     A ++   +         I   + P+A LL   P     PL++  V    L+ 
Sbjct: 64  ITLQAFAAAVLLGTLIAFMFVQSRAIEISLFPYAVLLQVTPVVAIAPLIIILVKNTQLSL 123

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +L+      + I+ N   G  +              +  +    + +PG  PY+  
Sbjct: 124 TICATLV----ALFPIISNTTLGLRSVDPGLANYFRMNRASRLKTLIKLRIPGALPYFFG 179

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G A   ++V+E  +      R++GL   I ++      P +   + ++    +A
Sbjct: 180 GLRISSGLALIGAVVAEFVAG--TGGRSSGLAYEILDAGFTLDIPRMFAALFLITLTGVA 237

Query: 569 L 569
           L
Sbjct: 238 L 238



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L +    T    L A   ++L   + A +  +SR + + L P   ++Q  P++      
Sbjct: 53  ALLRALLVTLRITLQAFAAAVLLGTLIAFMFVQSRAIEISLFPYAVLLQVTPVVAIAPLI 112

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++   N      I A L A+F I +        +    L ++   L    R  R S  + 
Sbjct: 113 IILVKNTQLSLTICATLVALFPIIS--------NTTLGLRSVDPGLANYFRMNRASRLKT 164

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              L +P ++P     + +S        V +E   V  T     G+   I  A    D+ 
Sbjct: 165 LIKLRIPGALPYFFGGLRISSGLALIGAVVAEF--VAGTGGRSSGLAYEILDAGFTLDIP 222

Query: 240 AILYAMLTMLGVIFLY 255
            +  A+  +       
Sbjct: 223 RMFAALFLITLTGVAL 238


>gi|260463810|ref|ZP_05812007.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259030407|gb|EEW31686.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 250

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +LV   +     GI+ TT+P          L+  +L   A  T    L     SL  
Sbjct: 3   VGLLLVAWELYATYSGIKPTTLPAPSRVFEQAMLNRDALVDNAIPTIRATLIGFAFSLSA 62

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F  + L    + L   L P+  I Q++P++      V++F      K++   L   F  
Sbjct: 63  AFALSMLVDFFQPLRRALFPVFIISQTLPLVAIAPLVVLWFGFGLAPKIMLVALVTFF-- 120

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M  ++ +       ++ ++ R+     W+ F    +P ++P     + +S++ 
Sbjct: 121 ------PMLVALVEGYEATEPEIGQMLRAMGAGRWRVFVLARLPSALPYFFAGLRISITY 174

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQLL 259
                + +E            G+G Y+  A        +L A+     +  ++F    LL
Sbjct: 175 AVVGAIFAEYAGAAK------GLGIYMLNAKNNFRPDLVLAAVGVSAALTLILFGLTVLL 228

Query: 260 FRPMIVW 266
            R  + W
Sbjct: 229 QRLAMPW 235



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   ++    +      + + + F   +   + P   +    P     PLVV    +  
Sbjct: 48  TIRATLIGFAFSLSAAFALSMLVDFFQPLRRALFPVFIISQTLPLVAIAPLVVLWFGFGL 107

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+   T + +L  ++ G  A   +  ++  +     WR +    LP   PY
Sbjct: 108 APK----IMLVALVTFFPMLVALVEGYEATEPEIGQMLRAMGAGRWRVFVLARLPSALPY 163

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G   +   A   +I +E A          GLG Y+  +        V+  V +    
Sbjct: 164 FFAGLRISITYAVVGAIFAEYAG------AAKGLGIYMLNAKNNFRPDLVLAAVGVSAAL 217

Query: 566 VLAL 569
            L L
Sbjct: 218 TLIL 221


>gi|90407797|ref|ZP_01215974.1| ABC transporter permease protein [Psychromonas sp. CNPT3]
 gi|90311062|gb|EAS39170.1| ABC transporter permease protein [Psychromonas sp. CNPT3]
          Length = 262

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 17/249 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +L I    +L   +    +P  +     +      L ++A  T + ++  + + L  
Sbjct: 28  ALVILSIWQAAVLFFALPNFILPSPLAVFERLCFRYDVLLRHAWITFIEIVLGLGLGLSM 87

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             ++A      + L   L+PIL   Q+ P+       +++       KV+ A L   F I
Sbjct: 88  GMLFALQMLLFKPLKRWLMPILIASQAFPVFAIAPILMLWLGYGIASKVVMAALIIFFPI 147

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T          Y  L N P+   ++ ++   S WQ   Y+ +P S+P L   + +++  
Sbjct: 148 CTCC--------YDGLRNTPQGYLDLVKTMGASKWQVLRYIQLPASLPTLASGIRVAV-- 197

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259
               V+A    V G+ V    G+G  +  A     +  +  A+  +  +      L   L
Sbjct: 198 ----VIAPIGAVAGEWVGSSEGLGYLMLQANARMLIDEMFAALFILSALSVGLYFLTDIL 253

Query: 260 FRPMIVWSN 268
            R +I W +
Sbjct: 254 LRKLIHWQD 262



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 23/245 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQS--IGYIVNHFTYQDVLYVI-----------WLGC 384
           +R   M    +  ++  + I   WQ+  + + + +F     L V                
Sbjct: 12  KRSRNMFAAAFRFLISALVILSIWQAAVLFFALPNFILPSPLAVFERLCFRYDVLLRHAW 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT   +V+ + +   + +   + +     +   + P      AFP     P+++  + Y 
Sbjct: 72  ITFIEIVLGLGLGLSMGMLFALQMLLFKPLKRWLMPILIASQAFPVFAIAPILMLWLGYG 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  +L++ F     I      G    P  + ++  +   + W+  RYI LP   P
Sbjct: 132 IASKVVMAALIIFF----PICTCCYDGLRNTPQGYLDLVKTMGASKWQVLRYIQLPASLP 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++  E          + GLG  + ++  +    E+   + I+  
Sbjct: 188 TLASGIRVAVVIAPIGAVAGEWVG------SSEGLGYLMLQANARMLIDEMFAALFILSA 241

Query: 565 FVLAL 569
             + L
Sbjct: 242 LSVGL 246


>gi|257461050|ref|ZP_05626148.1| abcb protein [Campylobacter gracilis RM3268]
 gi|257441424|gb|EEV16569.1| abcb protein [Campylobacter gracilis RM3268]
          Length = 265

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 99/250 (39%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A +  +     +     E   P  + +   +      + +  +      +  R L
Sbjct: 21  LWGGFASLGAVCFFIAVWQVASEAYGPLILPEPAAVFSKACEILKNFAANDLVLSLKRAL 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   ++L         A   + L   L P++ ++ S P + ++   + +F          
Sbjct: 81  AGTFLALFAGICSGLAAGYFKSLRAFLNPLITVLLSTPPIVWIVLAIFWFH--------F 132

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            + + +F +          S  Q++ ++  +  E+  S++ S ++K  YL  P  +  L+
Sbjct: 133 GDTSVLFTVVIVVAPMTFASAAQAMASVSAEYTELFDSYKSSFFKKLRYLYAPHLIERLL 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S G   +V +E++   D      GIG+ IA A    D + ++  +   +    
Sbjct: 193 PAIYVAVSNGAKVLVMAELLGAND------GIGAKIAEARVNIDTVEVMAYVCLAIAFTA 246

Query: 254 LYDQLLFRPM 263
           L+D L+ +P+
Sbjct: 247 LFDYLVTKPL 256



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 10/196 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ R +    +A    I  G+  G+   + + + P   +L + P  V+  L +    + 
Sbjct: 74  LSLKRALAGTFLALFAGICSGLAAGYFKSLRAFLNPLITVLLSTPPIVWIVLAIFWFHFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    + +++   T      +     ++   ++ E+  S+  + ++  RY+  P +  
Sbjct: 134 DTSVLFTVVIVVAPMTF----ASAAQAMASVSAEYTELFDSYKSSFFKKLRYLYAPHLIE 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +     A        +++E+           G+GA IAE+       EV+  V +   
Sbjct: 190 RLLPAIYVAVSNGAKVLVMAELLG------ANDGIGAKIAEARVNIDTVEVMAYVCLAIA 243

Query: 565 FVLALNRFLWHPLYLY 580
           F    +  +  PL + 
Sbjct: 244 FTALFDYLVTKPLQIL 259


>gi|323342333|ref|ZP_08082565.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463445|gb|EFY08639.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 213

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 76/188 (40%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++ A+ +  +   V A++ ++ + +   ++PI+ + Q+IP + F    V++       K 
Sbjct: 20  VVVAVTLGSIIAIVLASILSRFKTISKYIMPIIGLFQTIPGIVF--IGVLFVYTGMRPKT 77

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   L A        ++ +  + Y  + ++     E +R   ++ WQ    + +P ++P 
Sbjct: 78  IYIALTA------YAIFPVLKNTYAGILDVNASYVEAARGIGMTQWQSLLKVELPMAVPS 131

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + MS      + V + MI  G       G+G +I   I       IL   +    +
Sbjct: 132 IFAGIRMSTVYTVSWAVLAAMIGQG-------GLGVFIYRGIDTNVQETILIGAIPSAIL 184

Query: 252 IFLYDQLL 259
             L    +
Sbjct: 185 AILMGYFV 192



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VVV + + SII I +   +     IS  I P   L    P  VF   +     Y  + P 
Sbjct: 20  VVVAVTLGSIIAIVLASILSRFKTISKYIMPIIGLFQTIPGIVF---IGVLFVYTGMRPK 76

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                L  +   + +L N  AG       + E A    +T W+    + LP   P    G
Sbjct: 77  TIYIALTAY-AIFPVLKNTYAGILDVNASYVEAARGIGMTQWQSLLKVELPMAVPSIFAG 135

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +     + ++++ +   G       GLG +I    +      +++G +      + +
Sbjct: 136 IRMSTVYTVSWAVLAAMIGQG-------GLGVFIYRGIDTNVQETILIGAIPSAILAILM 188

Query: 570 NRFL 573
             F+
Sbjct: 189 GYFV 192


>gi|84385167|ref|ZP_00988199.1| ABC transporter permease protein [Vibrio splendidus 12B01]
 gi|84379764|gb|EAP96615.1| ABC transporter permease protein [Vibrio splendidus 12B01]
          Length = 271

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 16/244 (6%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLS 74
           P +  L++  +++G+  +++   +  +        V I L      L ++   T   +L 
Sbjct: 28  PVMRLLISSAVILGLWQMVVVIFEMPSFILPAPAEVFIKLIERYDVLLKHTWVTAQEILL 87

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +++ L     +A        L   L+PIL   Q+IP+       +++       KV+ A
Sbjct: 88  GLLLGLSMGLFFALQMLMFEPLKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMA 147

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +   F + T          Y  L N P    +++++   S WQ   Y+ +P ++P L  
Sbjct: 148 AIIIFFPVTTCC--------YDGLRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLAS 199

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++      V+A    VVG+ V    G+G  +  A     +  +  A+  +  +   
Sbjct: 200 GIRVAV------VIAPIGAVVGEWVGSSEGLGYLMLQANARMIIDEMFAALFILAVLSIS 253

Query: 255 YDQL 258
              +
Sbjct: 254 LYFI 257



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  ++++ F     +      G  
Sbjct: 109 LKRWLLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W+  RYI LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSEGLGYLMLQANARMIIDEMFAALFILAVLSISL 254


>gi|329912974|ref|ZP_08275856.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327545472|gb|EGF30676.1| binding-protein-dependent transport systems inner membrane
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 64

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 36/64 (56%)

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
           ++E  +WG   L   GLG+YI + T+ G F  + LG+ +MC FV+ LNRF W  LY    
Sbjct: 1   MAEYVTWGKTTLIADGLGSYIKQMTDAGDFHRIALGIGVMCVFVMLLNRFFWRKLYSLAE 60

Query: 583 RCLR 586
              R
Sbjct: 61  DRSR 64



 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%)

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +E +  G T +   G+GSYI       D   I   +  M   + L ++  +R +   + 
Sbjct: 2   AEYVTWGKTTLIADGLGSYIKQMTDAGDFHRIALGIGVMCVFVMLLNRFFWRKLYSLAE 60


>gi|72161710|ref|YP_289367.1| ABC transporter permease [Thermobifida fusca YX]
 gi|71915442|gb|AAZ55344.1| ABC transporter, permease component [Thermobifida fusca YX]
          Length = 286

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 88/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +    +    L     T+ P ++       +    L  +AS T       ++    
Sbjct: 46  IVVLLASWELSAGRLIDDLLTSRPSEVFPTFWSWVVSGELLYHASSTFKDAFLGLLAGGG 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   +  +S+ L  V  P +    ++P    +   +++       +V+ A     F 
Sbjct: 106 LGLVVGCVLGQSQWLARVCEPFITAFYTMPKHALIPLFIMWVGIGSELRVLTAAAIVFFL 165

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F         + +  + ++ ++L +  R    + +   + + +P ++  +   + +++ 
Sbjct: 166 VFY--------NTFFGIRDVSKNLVDSVRVMGGTAFDVLFRVMLPSALIWVFAALKLAVP 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                VV +EM+          G+G  +A+     +      A+  +L V FL D+L+
Sbjct: 218 QAIVGVVVAEMLAG------DRGLGFLVAMHAGTFNSDGTFAAIFALLIVGFLVDRLM 269



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 10/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              ++   +PF       P +   PL +  V        L  + ++ F     + +N   
Sbjct: 117 SQWLARVCEPFITAFYTMPKHALIPLFIMWVGIGSELRVLTAAAIVFF----LVFYNTFF 172

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      +  +       T +     ++LP    +       A   A    +V+E+ +  
Sbjct: 173 GIRDVSKNLVDSVRVMGGTAFDVLFRVMLPSALIWVFAALKLAVPQAIVGVVVAEMLAGD 232

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG  +A      +       +  +      ++R +
Sbjct: 233 ------RGLGFLVAMHAGTFNSDGTFAAIFALLIVGFLVDRLM 269


>gi|294341766|emb|CAZ90192.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 276

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 92/245 (37%), Gaps = 6/245 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L++ +   V  +  + W  VV    I         ++          + +   +T+ 
Sbjct: 20  PRVLRVAAPLGVGVLFLLIWQLVVEVGHIPSYLLPGPLLIAQALVAHAPTLFFALLMTLK 79

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                 + A+++     +       +   + P+A +L   P     PL++  +    L  
Sbjct: 80  VTFFAFLAATLLGTLAALLFAQSRWLEMSLFPYAVMLQVTPIVAIAPLIIIWIKNTELAL 139

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +++ IF     I+ N   G ++   +   + + +  + W+    + +PG  PY+  
Sbjct: 140 VVCATIIAIF----PIISNTTLGLNSVSGNLNNLFTLYRASRWQRLVRLRIPGALPYFFG 195

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   + G A   ++V+E  +      + +GL   I +S      PE+   ++++    +A
Sbjct: 196 GLRISSGLALIGAVVAEFVAG--TGGQGSGLAYQILQSGYNLQIPEMFAALILLTLAGVA 253

Query: 569 LNRFL 573
           L   +
Sbjct: 254 LFVLM 258



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 91/246 (36%), Gaps = 11/246 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +   + F+L+  ++  + H I    +P  ++    +     +L      T     
Sbjct: 24  RVAAPLGVGVLFLLIWQLVVEVGH-IPSYLLPGPLLIAQALVAHAPTLFFALLMTLKVTF 82

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A + + L   + A L A+SR L M L P   ++Q  PI+      +++  N        
Sbjct: 83  FAFLAATLLGTLAALLFAQSRWLEMSLFPYAVMLQVTPIVAIAPLIIIWIKN-------- 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ELA +       ++ +  +    L ++  +L  +   +R S WQ+   L +P ++P   
Sbjct: 135 TELALVVCATIIAIFPIISNTTLGLNSVSGNLNNLFTLYRASRWQRLVRLRIPGALPYFF 194

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S        V +E +          G+   I  +     +  +  A++ +     
Sbjct: 195 GGLRISSGLALIGAVVAEFVAGTGGQGS--GLAYQILQSGYNLQIPEMFAALILLTLAGV 252

Query: 254 LYDQLL 259
               L+
Sbjct: 253 ALFVLM 258


>gi|209552358|ref|YP_002284273.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539470|gb|ACI59402.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 272

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+   + I++I  + +G+ IG  P++ + + PF  +++  P     P++   + 
Sbjct: 75  SGASLIRLFAGLGISTIAALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILFIAMG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +       L++ G    ++ ++   A   P +    A +   + W+    ++LP I
Sbjct: 135 LGEASK----IALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIGLRVVLPQI 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  S        +GLG  I       S   +   V+ +
Sbjct: 191 LPRLIACLRLQLGPAWLFLIAAEAIS------SDSGLGYRIFLVRRYLSMDIIFPYVVWI 244

Query: 563 CCFVLALNRFL 573
               + +N  L
Sbjct: 245 TLLAVVMNYIL 255



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 14/205 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   +  + +R+ + + IS +   V   L      L  +L P + ++  +P L  L    
Sbjct: 71  LWSDSGASLIRLFAGLGISTIAALVIGMLIGMLPYLRALLSPFVAVISMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   +      +PR+    + +   S WQ  
Sbjct: 131 IAMGLG--------EASKIALIVIGVAPTMIRDLALKALELPREQIVKAETLGGSSWQIG 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+  + + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLIACLRLQLGPAWLFLIAAEAISSDS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           I   ++ +  +  + + +L R  I 
Sbjct: 237 IFPYVVWITLLAVVMNYILDRIRIA 261


>gi|16803467|ref|NP_464952.1| hypothetical protein lmo1427 [Listeria monocytogenes EGD-e]
 gi|47095378|ref|ZP_00232988.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224499720|ref|ZP_03668069.1| hypothetical protein LmonF1_08509 [Listeria monocytogenes Finland
           1988]
 gi|224501632|ref|ZP_03669939.1| hypothetical protein LmonFR_03787 [Listeria monocytogenes FSL
           R2-561]
 gi|254827715|ref|ZP_05232402.1| opuCB [Listeria monocytogenes FSL N3-165]
 gi|254829814|ref|ZP_05234469.1| hypothetical protein Lmon1_00595 [Listeria monocytogenes 10403S]
 gi|254898407|ref|ZP_05258331.1| hypothetical protein LmonJ_01290 [Listeria monocytogenes J0161]
 gi|254912102|ref|ZP_05262114.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|254936429|ref|ZP_05268126.1| opuCB [Listeria monocytogenes F6900]
 gi|9651976|gb|AAF91340.1|AF249729_2 membrane permease OpuCB [Listeria monocytogenes]
 gi|16410856|emb|CAC99505.1| opuCB [Listeria monocytogenes EGD-e]
 gi|47016199|gb|EAL07122.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258600094|gb|EEW13419.1| opuCB [Listeria monocytogenes FSL N3-165]
 gi|258609021|gb|EEW21629.1| opuCB [Listeria monocytogenes F6900]
 gi|293590070|gb|EFF98404.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
          Length = 218

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALVVEFALGK 200



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LVVEFALGKLEYRLTPKAIR 211


>gi|319782687|ref|YP_004142163.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168575|gb|ADV12113.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 250

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 89/247 (36%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +L+   +     GI+ T +P          L+  +L   A  T    L     SL  
Sbjct: 4   AGLLLLAWELYATYSGIRATILPAPSRVFEQAMLNREALADNAVPTIRATLLGFACSLSA 63

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            FV + L    + L   L P+  + Q++P++      V++F      K++   L   F  
Sbjct: 64  AFVLSMLVDFFQPLRRALFPVFIVSQTLPLVAVAPLVVLWFGFGLAPKIMLVALVTFF-- 121

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  M  ++ +       ++ ++ R+     W+ F    +P ++P     + +S++ 
Sbjct: 122 ------PMLVALVEGYEATEAEIGQMLRAMGAGRWRIFLLARLPSALPYFFAGLRISITY 175

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQLL 259
                + +E            G+G Y+  A        +L A+     +  V+F    LL
Sbjct: 176 AVVGAIFAEYAGAAK------GLGIYMLNAKNNFRPDLVLAAVGVSAALTLVLFGLTVLL 229

Query: 260 FRPMIVW 266
            R  + W
Sbjct: 230 QRLAMPW 236



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   ++    +      + + + F   +   + P   +    P     PLVV    +  
Sbjct: 49  TIRATLLGFACSLSAAFVLSMLVDFFQPLRRALFPVFIVSQTLPLVAVAPLVVLWFGFGL 108

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   +L+   T + +L  ++ G  A   +  ++  +     WR +    LP   PY
Sbjct: 109 APK----IMLVALVTFFPMLVALVEGYEATEAEIGQMLRAMGAGRWRIFLLARLPSALPY 164

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G   +   A   +I +E A          GLG Y+  +        V+  V +    
Sbjct: 165 FFAGLRISITYAVVGAIFAEYAG------AAKGLGIYMLNAKNNFRPDLVLAAVGVSAAL 218

Query: 566 VLAL 569
            L L
Sbjct: 219 TLVL 222


>gi|121997010|ref|YP_001001797.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
 gi|121588415|gb|ABM60995.1| binding-protein-dependent transport systems inner membrane
           component [Halorhodospira halophila SL1]
          Length = 253

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 95/242 (39%), Gaps = 16/242 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASR 67
              RR++ +       + V+ +     H + ++ +P   V  + +  TL           
Sbjct: 1   MSRRRVWSSWPPWAGLLGVVALWMAAAHQVPDSILPDPWVVTLELGGTLHSGDHWANTGV 60

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++ + ++SLL        AA+S  L   L PI+ ++++ P + +L   V++     
Sbjct: 61  TLRNVVVSFLLSLLGGVALGLWAARSPTLQRALHPIIVLIEAAPHIAWLVLAVLWLGIGV 120

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V+     A+  I+         +    +  I R + +++  ++L  +++  ++ +P 
Sbjct: 121 GPPVLVGVSMALPLIY--------MATSHGIAQIDRGIMDMAHIYQLGWYKRLTHILLPH 172

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               L      ++S  W  V+ +E            G+G  +  +    ++ A+   +L 
Sbjct: 173 LALTLAGAASGALSVSWRAVIMAEAFA------SDAGLGQSLWGSYLYGEVTAVYAQVLW 226

Query: 248 ML 249
           ++
Sbjct: 227 IV 228



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 10/259 (3%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
                            +   W      V   I        +                +T
Sbjct: 2   SRRRVWSSWPPWAGLLGVVALWMAAAHQVPDSILPDPWVVTLELGGTLHSGDHWANTGVT 61

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  VVV  +++ +  + +G+W    P +   + P   L+ A P   +  L V  +     
Sbjct: 62  LRNVVVSFLLSLLGGVALGLWAARSPTLQRALHPIIVLIEAAPHIAWLVLAVLWLGIGVG 121

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P     L+ +      I      G +       ++A  + +  ++   +I+LP +    
Sbjct: 122 PP----VLVGVSMALPLIYMATSHGIAQIDRGIMDMAHIYQLGWYKRLTHILLPHLALTL 177

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
              A  A   +W A I++E  +         GLG  +  S   G    V   VL +    
Sbjct: 178 AGAASGALSVSWRAVIMAEAFA------SDAGLGQSLWGSYLYGEVTAVYAQVLWIVLLG 231

Query: 567 LALNRFLWHPLYLYGTRCL 585
           LAL   L HP      R L
Sbjct: 232 LALEYLLIHPGRQLIERRL 250


>gi|216264233|ref|ZP_03436225.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           156a]
 gi|215980706|gb|EEC21513.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           156a]
          Length = 478

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   ++    IS+        + A+   S+    +L   +
Sbjct: 251 ILSIPRDSGAYGGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSSKIFYKILSMSV 310

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ +    ++   + +   I       +  +  ++   IP+ 
Sbjct: 311 DILSSIPAIIFGLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 366

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 367 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 415

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 416 MGTNLGLATNLNEPSRTLTVHLLML 440



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 262 GGISYLILNTFYVIILTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIF 321

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V  +    L+  +  SL+++      I+          P  +K  + +    
Sbjct: 322 GLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 377

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 378 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 437

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 438 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 476


>gi|154484346|ref|ZP_02026794.1| hypothetical protein EUBVEN_02059 [Eubacterium ventriosum ATCC
           27560]
 gi|149734823|gb|EDM50740.1| hypothetical protein EUBVEN_02059 [Eubacterium ventriosum ATCC
           27560]
          Length = 201

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 64/148 (43%), Gaps = 8/148 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +   ++  +++ +    V+++L+  S     +   I+ +   IP +  +   +++   
Sbjct: 3   LHSLSLIIKGLIVGIALALVFSSLSVISETFYTIYNMIVSMCDLIPGIALIPVAILWIGV 62

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                      A IF +  + VW M+ S+      +P    EV R+  LS  +  + + +
Sbjct: 63  GDG--------AIIFMVIHAVVWPMSRSIIDGFNAVPELYLEVGRNIGLSPVKLIFGVFL 114

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           P ++P +   + +  +  W  ++++EMI
Sbjct: 115 PAALPRIFSGIKVGWARAWRGLISAEMI 142



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 49/146 (33%), Gaps = 4/146 (2%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           +   ++  ++  +I+   + +             +       +    P     P+ +  +
Sbjct: 1   MVLHSLSLIIKGLIVGIALALVFSSLSVISETFYTIYNMIVSMCDLIPGIALIPVAILWI 60

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                     +  ++I    W +  ++I G +A P  + EV  +  ++  +    + LP 
Sbjct: 61  GVGDG----AIIFMVIHAVVWPMSRSIIDGFNAVPELYLEVGRNIGLSPVKLIFGVFLPA 116

Query: 502 IFPYYVTGAITACGGAWNASIVSEVA 527
             P   +G       AW   I +E+ 
Sbjct: 117 ALPRIFSGIKVGWARAWRGLISAEMI 142


>gi|33600006|ref|NP_887566.1| transmembrane permease ABC transporter protein [Bordetella
           bronchiseptica RB50]
 gi|33567604|emb|CAE31517.1| probable transmembrane permease ABC transporter protein [Bordetella
           bronchiseptica RB50]
          Length = 250

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 10/231 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             ++           + +    Q +        +     +     +T+   ++   + S 
Sbjct: 11  AGFLAAWHLLSETGVLPVFFFGQPVEVARTVADWFASGEIYPHLLVTLAETLLSFGLGSA 70

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + VG+W+   P  ++   PF + + + P  VF P+          +       L+ F 
Sbjct: 71  TGLAVGLWLALHPFWAAVFDPFIKAINSMPRVVFAPIFAVWFGLGIGSKVALGVTLVFFV 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                 FNV  G      +    A           R++ LP    +  +    A G A+ 
Sbjct: 131 VF----FNVYQGVRDVNPNVVASARMLGARPRDLLRHVYLPSATSWLFSSLHNAVGMAFV 186

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +++ E          + G+G  I ++        V  G++++  F + L+
Sbjct: 187 GAVIGEYLG------SSAGVGYLILQAEGVFDINTVFAGIVVLTLFAVILD 231



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 73/228 (32%), Gaps = 17/228 (7%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P ++   V        +  +   T    L +  +            A       V  P 
Sbjct: 33  QPVEVARTVADWFASGEIYPHLLVTLAETLLSFGLGSATGLAVGLWLALHPFWAAVFDPF 92

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +  + S+P + F     V+F      KV            T   + + F++YQ + ++  
Sbjct: 93  IKAINSMPRVVFAPIFAVWFGLGIGSKVALG--------VTLVFFVVFFNVYQGVRDVNP 144

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           ++   +R           ++ +P +   L  ++  ++   +   V  E +          
Sbjct: 145 NVVASARMLGARPRDLLRHVYLPSATSWLFSSLHNAVGMAFVGAVIGEYLGSSA------ 198

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
           G+G  I  A    D+  +   ++ +     + D ++    + ++ W  
Sbjct: 199 GVGYLILQAEGVFDINTVFAGIVVLTLFAVILDFVVSIAEKRLLSWQP 246


>gi|325528389|gb|EGD05530.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. TJI49]
          Length = 246

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 85/240 (35%), Gaps = 14/240 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLL 81
            A V      +      Q   VP   V    + L     L      +  R    + + + 
Sbjct: 8   AALVAAWQFASHGDAAHQYAFVPLQQVGSALLELARSGELATDLGASLRRTTLGLGVGIA 67

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A+S  +  +  P    ++ +P+LG +    ++            E A IF 
Sbjct: 68  AGLALGAAMARSTLVRKLCEPAFQALRYVPLLGLIPLLSLWAGTG--------EFAKIFI 119

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + MT + +  L  +     E+++S+RL+    +  + +P ++P L   ++ ++ 
Sbjct: 120 VALAAFYPMTTASFDGLSRVDPRYVELAQSYRLTRVGLWRDVLIPGALPDLFTGVLQAVP 179

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W    +SE++          G+G+ +  A        +L  +L +  +      L  R
Sbjct: 180 FAWITATSSELLFNAGA-----GVGNLMQNAQAGARADVLLVCVLGVTALAAGMSMLCER 234



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 9/189 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R  + + +     + +G  +     +    +P  Q L   P     PL+      
Sbjct: 52  GASLRRTTLGLGVGIAAGLALGAAMARSTLVRKLCEPAFQALRYVPLLGLIPLLSLWAGT 111

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++     + +      G S     + E+A S+ +T    WR +++PG  
Sbjct: 112 G----EFAKIFIVALAAFYPMTTASFDGLSRVDPRYVELAQSYRLTRVGLWRDVLIPGAL 167

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG + A   AW  +  SE+           G+G  +  +        +++ VL + 
Sbjct: 168 PDLFTGVLQAVPFAWITATSSELLFNAG-----AGVGNLMQNAQAGARADVLLVCVLGVT 222

Query: 564 CFVLALNRF 572
                ++  
Sbjct: 223 ALAAGMSML 231


>gi|238025063|ref|YP_002909295.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237879728|gb|ACR32060.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 238

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 61/146 (41%), Gaps = 10/146 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFL 116
             L  Y  R  + +  +M +++L         ++          + + +I  ++P L  L
Sbjct: 36  GDLVYYTGRHLMLVGYSMALAILVGIPAGVALSRPSAARHAERFMQVFNIGNTVPSLAVL 95

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F           E  AI A+F + +  +T + Y+ + N+P  L E +R   ++ 
Sbjct: 96  AIALGIFGIG--------EAPAIVALFLASLLPITRNAYEGMRNVPAALREAARGIGMTP 147

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSG 202
           WQ    + +P ++P ++  +  +++ 
Sbjct: 148 WQSLVRVELPNALPIIIGGVRTALAI 173



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 11/180 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + I    ++  + +G   Q+IG        Q    +++     +  V   + +A +
Sbjct: 2   TRRTVRIAGSLLLAIIVLGWIAQAIG---ADTWRQYSGDLVYYTGRHLMLVGYSMALAIL 58

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + IP G+ +  RP  +   + F Q+       P+     + +               + +
Sbjct: 59  VGIPAGVAL-SRPSAARHAERFMQVFNIGNTVPSLAVLAIALGIFGIGEA----PAIVAL 113

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              +   I  N   G    P   +E A    +T W+    + LP   P  + G  TA   
Sbjct: 114 FLASLLPITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNALPIIIGGVRTALAI 173


>gi|242399860|ref|YP_002995285.1| Osmoprotection protein (proW-1) [Thermococcus sibiricus MM 739]
 gi|242266254|gb|ACS90936.1| Osmoprotection protein (proW-1) [Thermococcus sibiricus MM 739]
          Length = 205

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 77/191 (40%), Gaps = 15/191 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +   +   +++ +S++     A L+ KS+R+  +++   +++Q+IP    +   V     
Sbjct: 12  TEHLMLTYASLFLSIVVGIPLAVLSLKSKRVASIIMGFANLVQAIPSFAVVAIVVPLLGI 71

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +          A+FAIF   +  +  + Y  L  +   + + +R   L+ W+   Y+  
Sbjct: 72  GFTP--------AVFAIFLRALLPIVKNTYVGLNEVNEAMIDAARGIGLTEWEIIRYVRF 123

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   +        F  V +  I +   +I   G+GS +   +   +   I+   
Sbjct: 124 PHAYPAMFAGIK-------FAAVLANSIAILTAIIGSGGLGSLVFEGLASFNTDKIIAGS 176

Query: 246 LTMLGVIFLYD 256
           L  + +    D
Sbjct: 177 LPAILMAVFID 187



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + ++ ++ IP+ +       ++S I  FA L+ A P+     +VV  +     
Sbjct: 15  LMLTYASLFLSIVVGIPLAVLSLKSKRVASIIMGFANLVQAIPSFAVVAIVVPLLGIGFT 74

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +       I+ N   G +       + A    +T W   RY+  P  +P  
Sbjct: 75  ----PAVFAIFLRALLPIVKNTYVGLNEVNEAMIDAARGIGLTEWEIIRYVRFPHAYPAM 130

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   A + +I++ +   G       GLG+ + E     +  +++ G L      
Sbjct: 131 FAGIKFAAVLANSIAILTAIIGSG-------GLGSLVFEGLASFNTDKIIAGSLPAILMA 183

Query: 567 LALN 570
           + ++
Sbjct: 184 VFID 187


>gi|229820542|ref|YP_002882068.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229566455|gb|ACQ80306.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 266

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 74/221 (33%), Gaps = 9/221 (4%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             V+  +       + +         ++    +T    ++   +A +  +P+   IG   
Sbjct: 44  GAVSAALLPSPADVLRSLGELAATGDLLPAVGVTAGEALIGAALAFVCALPLAWLIGHSR 103

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             ++ ++P+     A PA    PL+V  + Y      +  +LL+ F     I+   + G 
Sbjct: 104 LAAAALEPYVAASQAIPAVALAPLLVLWIGYGLRPIAVLCALLVFF----PIVIATLLGL 159

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                D    A       W   R+I  P   P  + G       +   ++V E    G  
Sbjct: 160 RTLDRDVVAAARVDGAGRWSLVRWIEFPLALPSILAGVRNGVTLSVTGAVVGEFVIGGRT 219

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            L        +    ++     +   +L++C   ++L   +
Sbjct: 220 GLGLL-----LTTQRDRSDASGMFATLLVLCALAMSLYGLV 255



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 8/173 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D++  +        L      T    L    ++ +     A L   SR     L 
Sbjct: 51  LPSPADVLRSLGELAATGDLLPAVGVTAGEALIGAALAFVCALPLAWLIGHSRLAAAALE 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q+IP +      V++         +   L   F         +  +    L  +
Sbjct: 111 PYVAASQAIPAVALAPLLVLWIGYGLRPIAVLCALLVFF--------PIVIATLLGLRTL 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            RD+   +R      W    ++  P ++P ++  +   ++      V  E ++
Sbjct: 163 DRDVVAAARVDGAGRWSLVRWIEFPLALPSILAGVRNGVTLSVTGAVVGEFVI 215


>gi|325685678|gb|EGD27758.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 209

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + ++       L  +  +   V++ I  ++Q++P L  L   +  F          
Sbjct: 25  IALALGVIVAVPLGILLTRFPKTAKVVIGIASMLQTVPSLALLALMIPLFGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + AI A+F   +  +  + Y  + ++   L + ++   ++  Q    + VP +MP ++
Sbjct: 78  -TVPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTAMQSIRQVEVPLAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   + +  +  
Sbjct: 137 AGIRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILAL 189

Query: 254 LYDQLLFR 261
           + D LL R
Sbjct: 190 VIDWLLGR 197



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + +  I+ +P+GI +   P  +  +   A +L   P+     L++        
Sbjct: 20  LYISAIALALGVIVAVPLGILLTRFPKTAKVVIGIASMLQTVPSLALLALMIPLFGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G         + A    +T  +  R + +P   P  
Sbjct: 78  --TVPAIVALFIYSLLPILRNTYIGMEDVDPVLIDAAKGMGMTAMQSIRQVEVPLAMPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG  I           ++ G + +    
Sbjct: 136 MAGIRLSAIYVIAWATLASYIGAG-------GLGDLIFNGLNLFQPDLIIGGTIPVTILA 188

Query: 567 LALNRFLWH 575
           L ++  L  
Sbjct: 189 LVIDWLLGR 197


>gi|227893677|ref|ZP_04011482.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
 gi|227864537|gb|EEJ71958.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
          Length = 210

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 5/186 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F     +IIA +I +PVG        +++  + FAQ+L   P+     +++  +     
Sbjct: 24  LFLSFSSLIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALLFILIPFIGTGIG 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L        ++ N I G +  P D +EV  S  ++ W+  + I LP   P+ 
Sbjct: 84  PALIALVVL----ALPPLVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISLPLALPFI 139

Query: 507 VTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A      +AS+ + + + G   L  TGLG Y  +    G     +L +L M  F
Sbjct: 140 LNGIKLALVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVIIGGVSVALLSLLAMFIF 199

Query: 566 VLALNR 571
            L + +
Sbjct: 200 DLIIKK 205



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 79/189 (41%), Gaps = 15/189 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +      S+++I+L+       L +K+R +         I++ IP L  L F ++ F+ 
Sbjct: 21  GQHLFLSFSSLIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALL-FILIPFIG 79

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G        A+ A+    +  +  +       +P DLEEV  S  +S WQ    + +
Sbjct: 80  TGIGP-------ALIALVVLALPPLVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + +++      V+AS  +    T I   G+G  I   +    +  ++   
Sbjct: 133 PLALPFILNGIKLAL----VEVIASASLA---TYIGAGGLGQLIMTGLGLYKMQYVIIGG 185

Query: 246 LTMLGVIFL 254
           +++  +  L
Sbjct: 186 VSVALLSLL 194


>gi|197294981|ref|YP_002153522.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944460|emb|CAR57062.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 217

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 82/203 (40%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ I  ++ ++P +   
Sbjct: 10  SWPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              + +F     G        AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPFFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALHNVDAGIKEAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D+LL
Sbjct: 180 SMMKLLVGAVLVSLLAIVADRLL 202



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    ++ V + +  A +  +P+GI I     ++  +   A L+   P+   F 
Sbjct: 11  WPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   S +        ++  +   +   I+ N            KE  +   +T W+  
Sbjct: 71  LMIPFFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALHNVDAGIKEAGTGIGMTSWQRL 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA         ++ V   G       GLG  I  +  + S  +
Sbjct: 131 RLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQSSMMK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +++G +++    +  +R L
Sbjct: 184 LLVGAVLVSLLAIVADRLL 202


>gi|254824515|ref|ZP_05229516.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|293593754|gb|EFG01515.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
          Length = 223

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   LL 
Sbjct: 189 IPTAVMAILADLLL 202



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + +      G       GLG  I   T   +   ++L   I    +  L 
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 571 RFL 573
             L
Sbjct: 199 DLL 201


>gi|171742453|ref|ZP_02918260.1| hypothetical protein BIFDEN_01565 [Bifidobacterium dentium ATCC
           27678]
 gi|306822363|ref|ZP_07455742.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium dentium ATCC 27679]
 gi|309802134|ref|ZP_07696243.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278067|gb|EDT45728.1| hypothetical protein BIFDEN_01565 [Bifidobacterium dentium ATCC
           27678]
 gi|304554361|gb|EFM42269.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium dentium ATCC 27679]
 gi|308221214|gb|EFO77517.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 292

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 81/242 (33%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P I  ++  +++      L H           +    +     +L      T L   
Sbjct: 41  RRVPTIAAIVLLLVIWEAWVRLGHVPSTMIAAPSEIAQATVETWP-TLWPATQVTLLEGT 99

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              + ++    +   L   SR     L P+L   Q++P++      +++F     GK   
Sbjct: 100 VGFLFAVACGILIGILLYCSRTANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGK--- 156

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   + 
Sbjct: 157 -----IVIVTVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQIY 211

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +     +E +          G+G ++  A        I  A L ++ +  
Sbjct: 212 GGIRVSAAYIFATAATAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATLVIIVITG 265

Query: 254 LY 255
           + 
Sbjct: 266 ML 267



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             +V  + I  AW  +G++ +            T +    +     +T+    V  + A 
Sbjct: 47  AAIVLLLVIWEAWVRLGHVPSTMIAAPSEIAQATVETWPTLWPATQVTLLEGTVGFLFAV 106

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++ + P        P     PL +    +      + +++  +F
Sbjct: 107 ACGILIGILLYCSRTANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGKIVIVTVFGLF 166

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    I G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 167 ----PIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQIYGGIRVSAAYIF 222

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    L++      L
Sbjct: 223 ATAATAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIVITGML 267


>gi|254229368|ref|ZP_04922784.1| ABC-type proline/glycine betaine transport systems, permease
           component [Vibrio sp. Ex25]
 gi|151938059|gb|EDN56901.1| ABC-type proline/glycine betaine transport systems, permease
           component [Vibrio sp. Ex25]
          Length = 222

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 81/205 (39%), Gaps = 10/205 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L          +  A+ +++L       L  ++ R+  V++ +  I+ +IP +   
Sbjct: 15  NLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERVAKVVLYVASIIITIPSIALF 74

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      + A+  +       +  + Y ++ N+   L E +R   ++ 
Sbjct: 75  GLMIPLLSTIGHGI---GYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGMTP 131

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q+   + +P ++P ++  +  ++      +  +  I  G       G+G +I+  I + 
Sbjct: 132 FQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGISQS 184

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D   ++   + +  +  + D  L R
Sbjct: 185 DPRQLIVGAIAVSLLAIIADYGLIR 209



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 80/207 (38%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +FT  ++  +  L    +  V + + +A +  +P+GI I     ++  +   A ++   P
Sbjct: 10  NFTIDNLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERVAKVVLYVASIIITIP 69

Query: 430 ANVFFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++  +S   H    +   + ++  +Q  I+ N            +E A    +
Sbjct: 70  SIALFGLMIPLLSTIGHGIGYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGM 129

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T ++  + + +P   P  + G  TA         ++     G       GLG +I+    
Sbjct: 130 TPFQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGIS 182

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +    ++++G + +    +  +  L  
Sbjct: 183 QSDPRQLIVGAIAVSLLAIIADYGLIR 209


>gi|195941427|ref|ZP_03086809.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           80a]
          Length = 514

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|218530102|ref|YP_002420918.1| ABC transporter inner membrane protein [Methylobacterium
           chloromethanicum CM4]
 gi|218522405|gb|ACK82990.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 244

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +   +       SL      T  R+  + VI++    +      +SR    +
Sbjct: 27  RTLPAPSAVFAFILREAQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRL 86

Query: 100 LV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L  P+L ++ + P L       V+            E AAI A+  +++ N+   M +  
Sbjct: 87  LDTPLLVVLNT-PALVITVLAYVWLGL--------TETAAIVAVALNKLPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   LEE++ ++R        ++ +P   P +V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLEEMATTYRFDRRTWITHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I       D+ A++   L  + V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVMLALDSLLLQPLDAHVRRWR 244



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                + +   +T+ RV V  +IA  + + +GI +G        +     ++   PA V 
Sbjct: 43  AQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            + +       +   +  GA       +E+A+++      W
Sbjct: 103 TVLAYVWLGLTET----AAIVAVALNKLPNVAVIMREGARGLDPGLEEMATTYRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LP + P+ V  A +    AW   +V E+        R  G+G  I          
Sbjct: 159 ITHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG------RPNGVGFAINYYFTLFDVT 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            V+   L+    +LAL+  L  PL  +  R
Sbjct: 213 AVIGYSLVFMSVMLALDSLLLQPLDAHVRR 242


>gi|254976811|ref|ZP_05273283.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-66c26]
 gi|255094196|ref|ZP_05323674.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile CIP 107932]
 gi|255315950|ref|ZP_05357533.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-76w55]
 gi|255518608|ref|ZP_05386284.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-97b34]
 gi|255651728|ref|ZP_05398630.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-37x79]
 gi|260684758|ref|YP_003216043.1| putative osmoprotectant ABC transporter substrate-binding/permease
           [Clostridium difficile CD196]
 gi|260688416|ref|YP_003219550.1| putative osmoprotectant ABC transporter substrate-binding/permease
           [Clostridium difficile R20291]
 gi|306521526|ref|ZP_07407873.1| putative osmoprotectant ABC transporter, substrate-binding/permease
           protein [Clostridium difficile QCD-32g58]
 gi|260210921|emb|CBA66152.1| putative osmoprotectant ABC transporter, substrate-binding/permease
           protein [Clostridium difficile CD196]
 gi|260214433|emb|CBE06872.1| putative osmoprotectant ABC transporter, substrate-binding/permease
           protein [Clostridium difficile R20291]
          Length = 511

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ + +IP +  L F + +               A+ A+    +  M  + Y  + N+ 
Sbjct: 58  TINFLYTIPSISMLGFLIPFSGIGNT--------TAVIALTIYALLPMVRNTYTGITNVD 109

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +++ E +R    + +Q  + + +P ++P ++  +          V+ +  +    + I  
Sbjct: 110 KNILEAARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGA 162

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I   I   +    +   + +  +  ++D +L
Sbjct: 163 GGLGVAIYRGITTNNTAMTISGSILIALLALIFDFIL 199



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P+      ++      +    + L++  +      ++ N   G +    +  E
Sbjct: 59  INFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALL----PMVRNTYTGITNVDKNILE 114

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     T ++    I LP   P  ++G         N  I++   +     +   GLG 
Sbjct: 115 AARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGAGGLGV 167

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I       +    + G +++    L  +  L
Sbjct: 168 AIYRGITTNNTAMTISGSILIALLALIFDFIL 199


>gi|300690614|ref|YP_003751609.1| ABC-type glycine betaine transport system, Substrate-binding inner
           membrane component [Ralstonia solanacearum PSI07]
 gi|299077674|emb|CBJ50310.1| putative ABC-type glycine betaine transport system,
           Substrate-binding inner membrane component [Ralstonia
           solanacearum PSI07]
          Length = 502

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 16/207 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +   R    +  +   + L       LAA+ RR+   ++ I+ ++Q+IP L  L   
Sbjct: 301 GLWRLTQRHLALVAISTGAAALIGVPLGLLAAR-RRIQQPVLAIVGVLQTIPSLALLAML 359

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +    ++         + A+ A+    +  +  +    L  +P  L + + +   +  Q+
Sbjct: 360 IPLVGSIG-------VVPALIALTLYALLPIVRNTIVGLEQVPAGLRDAALALGFTPAQR 412

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  +          +  I  G       G G  IA  +   D  
Sbjct: 413 TRVVDLPLALPVILAGIKTAAVISVGTATIAAFIGAG-------GYGERIATGLALND-S 464

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVW 266
           A L A      V+ L  Q  F     W
Sbjct: 465 ATLLAGAIPAAVLALLVQGAFEVAERW 491



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 5/183 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V +    A++I +P+G+    R  I   +     +L   P+     +++  V    +
Sbjct: 310 LALVAISTGAAALIGVPLGLL-AARRRIQQPVLAIVGVLQTIPSLALLAMLIPLVGSIGV 368

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P   ++ A +   T  +  R + LP   P  
Sbjct: 369 VPAL---IALTLYALLPIVRNTIVGLEQVPAGLRDAALALGFTPAQRTRVVDLPLALPVI 425

Query: 507 VTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  TA   +   A+I + + + G+     TGL    + +   G+ P  VL +L+   F
Sbjct: 426 LAGIKTAAVISVGTATIAAFIGAGGYGERIATGLALNDSATLLAGAIPAAVLALLVQGAF 485

Query: 566 VLA 568
            +A
Sbjct: 486 EVA 488


>gi|269977358|ref|ZP_06184331.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris 28-1]
 gi|306818700|ref|ZP_07452422.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|269934661|gb|EEZ91222.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris 28-1]
 gi|304648386|gb|EFM45689.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
          Length = 266

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 81/241 (33%), Gaps = 14/241 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P  F L+                     P  +           +   Y   T +  L+
Sbjct: 23  VAPAFFGLILLGAWFATTAGGRIPAFILPTPTAVFRAAGELFATPNFWPYLGNTLVSALA 82

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             ++ LLF+   A        L   + P L   Q+IP +      +++           +
Sbjct: 83  GTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWL--------PAS 134

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA +        + +  S    L ++P ++ E ++    + WQ   ++ +P  +P L+ 
Sbjct: 135 WLAIVVLCAIMVFFPILVSTTVGLRHLPVEVLEAAKLDGANTWQLLRHMELPLVLPSLMG 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   ++      V  E+++ G       G+G+ I L     D   +  ++ T+  +   
Sbjct: 195 GIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTLATA 248

Query: 255 Y 255
            
Sbjct: 249 I 249



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   ++  +  +P+   I     +++ +QPF     A PA    PL++  +    
Sbjct: 76  TLVSALAGTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWLPASW 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   +  ++++ F     IL +   G    P +  E A       W+  R++ LP + P 
Sbjct: 136 LAIVVLCAIMVFF----PILVSTTVGLRHLPVEVLEAAKLDGANTWQLLRHMELPLVLPS 191

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       +   ++V E+   G       G+G  I   +       + + +  +C  
Sbjct: 192 LMGGIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTL 245

Query: 566 VLAL 569
             A+
Sbjct: 246 ATAI 249


>gi|167031930|ref|YP_001667161.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166858418|gb|ABY96825.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 237

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 17/202 (8%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPI 103
              + I  I      L  Y     + +L++M  +L          ++  R+      +  
Sbjct: 23  IHWIGIDTIARYRDDLGFYLQAHLILVLASMAAALAVGIPAGIALSRPHRVDKAERFMQF 82

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
            ++  +IP L  L   +                 AIFA+F + +  +  + Y+ L N+P 
Sbjct: 83  FNVGNTIPPLAVLAIALSILGIGAGP--------AIFALFLASLLPIVRNTYEGLKNVPA 134

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L+E +    ++  Q+ W + +P ++P +V  + +++        A    ++G       
Sbjct: 135 SLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVAL--ALNVGTAPLAFLIGANS---- 188

Query: 224 GIGSYIALAIKEQDLLAILYAM 245
            +GS I   I   +   +L   
Sbjct: 189 -LGSLIFPGIALNNQPQLLLGA 209



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 65/214 (30%), Gaps = 18/214 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V+  +A+ I W  I  I  +           L       V+  +  A  + IP GI +
Sbjct: 13  ATVLVILALLIHWIGIDTIARYRDDLGFYLQAHLIL-----VLASMAAALAVGIPAGIAL 67

Query: 409 GFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                +        F  +    P      + +S +              +   +   I+ 
Sbjct: 68  SRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G    P   KE A+   +T  +    + LP   P  V G   A       + ++ +
Sbjct: 124 NTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAPLAFL 183

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                       LG+ I       + P+++LG  
Sbjct: 184 IG-------ANSLGSLIFPGIALNNQPQLLLGAA 210


>gi|51598478|ref|YP_072666.1| phosphate ABC transporter, permease protein [Borrelia garinii PBi]
 gi|51573049|gb|AAU07074.1| phosphate ABC transporter, permease protein [Borrelia garinii PBi]
          Length = 456

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 229 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 288

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 289 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 344

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 345 YKYASFALGANKTETIIKIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 393

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 394 MGTNLGLATNLNEPSRTLTVHLLML 418



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 240 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 299

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 300 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 355

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 356 KTETIIKIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 415

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 416 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 454


>gi|332529796|ref|ZP_08405750.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332040817|gb|EGI77189.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 297

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 6/137 (4%)

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT----GWRWWRYIILPGIFPYYV 507
           L  +++    W +  N  AG    P+  +    ++ +     G R+  +I+LP   P  +
Sbjct: 158 LVFVLVHSVLWPLALNTYAGFQGVPDTLRMAGRNYGLHQQWFGLRYVLHILLPAALPAIL 217

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G       AW   I +E+           GLG YI ++  +    +V  G+ ++    L
Sbjct: 218 SGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAMVILIGL 275

Query: 568 ALNRFLWHPLYLYGTRC 584
            +    +  L     R 
Sbjct: 276 LVEGLGFQTLERLTVRR 292



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS----GWQKFWYLGVPFSMPGL 192
           + +F +  S +W +  + Y     +P  L    R++ L     G +   ++ +P ++P +
Sbjct: 157 SLVFVLVHSVLWPLALNTYAGFQGVPDTLRMAGRNYGLHQQWFGLRYVLHILLPAALPAI 216

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +  +  W  ++A+E++    +     G+G YI     E     +   +  ++ + 
Sbjct: 217 LSGLKIGWAFAWRTLIAAELVFGASS--GKGGLGWYIFQNRNELYTDKVFAGLAMVILIG 274

Query: 253 FLYDQLLFRPMIVWSNK 269
            L + L F+ +   + +
Sbjct: 275 LLVEGLGFQTLERLTVR 291


>gi|256378899|ref|YP_003102559.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255923202|gb|ACU38713.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 267

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 10/248 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
              R  F               +     +  +  V   +         +         + 
Sbjct: 13  PKARGRFDLRRAGTAVLYLAVVLGVWHLYVTLADVPQYLLPAPGAVAESLAGLASSGELW 72

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                T+  +V+ ++   +I   +G  +   P     + P+  L  A P     PL+V  
Sbjct: 73  PHLGYTVRNIVIGLVSGILIGCALGWVLASSPRARMLLAPYVVLFQAAPKIAVAPLLVLW 132

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +    + +L      + ++  +  G     +D + +     +   R+   + LP
Sbjct: 133 FGLGLGSQLTLVVML----AFFPMMIAMTLGLGEVTDDMRALGRVLAMDRKRFLLRVQLP 188

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P    GA  A   A   + ++E  S         GLG  +         P+++  VL
Sbjct: 189 AALPALFAGARIAVIDAMTGAFLAEYLS------AKQGLGYLMVMGKSTYDTPQLLAAVL 242

Query: 561 IMCCFVLA 568
           +     L 
Sbjct: 243 LTVVVGLT 250



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 17/228 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  + + +        L  +   T   ++  +V  +L       + A S R  M+L 
Sbjct: 52  LPAPGAVAESLAGLASSGELWPHLGYTVRNIVIGLVSGILIGCALGWVLASSPRARMLLA 111

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q+ P +      V++F      ++    + A F         M  +M   L  +
Sbjct: 112 PYVVLFQAAPKIAVAPLLVLWFGLGLGSQLTLVVMLAFF--------PMMIAMTLGLGEV 163

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D+  + R   +   +    + +P ++P L     +++         +E +        
Sbjct: 164 TDDMRALGRVLAMDRKRFLLRVQLPAALPALFAGARIAVIDAMTGAFLAEYLSAKQ---- 219

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             G+G  + +     D   +L A+L  + V         L+ R  + W
Sbjct: 220 --GLGYLMVMGKSTYDTPQLLAAVLLTVVVGLTGFGLVGLVERIALPW 265


>gi|300309803|ref|YP_003773895.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300072588|gb|ADJ61987.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 80/231 (34%), Gaps = 6/231 (2%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
              F ++ +   +   L + W  V   + +         ++      D   ++    +T+
Sbjct: 11  RPGFWRVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTL 70

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
               +   +A ++ + +         I   + P+A +L   P     PL++  V      
Sbjct: 71  KITFLAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAA 130

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +  +++      + I+ N   G  +       +      T W+  R + +P   PY+ 
Sbjct: 131 LTVCATIM----ALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFF 186

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            G   + G A   ++V+E  +        +GL   I ++  + + P +   
Sbjct: 187 GGLRISSGLALIGAVVAEFVAG--TGGTGSGLAYQILQAGFQLNIPRLFAA 235



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 86/231 (37%), Gaps = 11/231 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +   +A +L+  I+  LL  +    VP   + +  +  D   L      T     
Sbjct: 16  RVAAPLIIGIALLLMWQIVCTLLE-VPPYLVPTPALIVKTLAADWSMLMASLLVTLKITF 74

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A  ++++     A +  +SR + + L P   I+Q  PI+      +++  +      + 
Sbjct: 75  LAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVC 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A + A+F I +        +    L ++   L  + R  + + WQ    L +P ++P   
Sbjct: 135 ATIMALFPIIS--------NTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFF 186

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             + +S        V +E +          G+   I  A  + ++  +  A
Sbjct: 187 GGLRISSGLALIGAVVAEFVAGTGGTGS--GLAYQILQAGFQLNIPRLFAA 235


>gi|254302261|ref|ZP_04969619.1| glycine betaine ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322453|gb|EDK87703.1| glycine betaine ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 514

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ RR   +++  ++I+ +IP +  L F +    
Sbjct: 21  TIEHILISLLAISIASVLGIILGIIISEYRRFSGLILGTVNILYTIPSIALLGFFITITG 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  + NI   + E S     +  Q+ + + 
Sbjct: 81  VGNT--------TALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVK 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 133 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 185

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 186 SLLIAILALIFDFIL 200



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 49  YRRFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 104

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + LP   P  ++G         N   ++   +  
Sbjct: 105 GIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVLMSGIR-------NMVTMTIALAGI 157

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  +     ++
Sbjct: 158 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALIFDFILGLIEKRLTNHKRVKYKV 217


>gi|75911136|ref|YP_325432.1| binding-protein dependent transport system inner membrane protein
           [Anabaena variabilis ATCC 29413]
 gi|75704861|gb|ABA24537.1| Binding-protein-dependent transport systems inner membrane
           component [Anabaena variabilis ATCC 29413]
          Length = 190

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 27/196 (13%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      ++ ++ V  I A+I    +G  IG    +   ++   Q+  + P     PL 
Sbjct: 4   SIFLDVLTSLQKLFVGYIPAAIFGSFIGYLIGINVAVYQLMRRIFQIPNSIPPIAVLPLT 63

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             +++++   + W I  N   G   F                  +R +
Sbjct: 64  LVIFQ----ESESAIAVVIFMASLWTITINTAMGIQHFRRQNNN------------FRAV 107

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I      +           AW   I  E+       L + GLGA +  S + G+   ++ 
Sbjct: 108 IF-----HTSHALKVGIWVAWFTVIAIEML------LASKGLGALLWNSYKSGNSNYIIE 156

Query: 558 GVLIMCCFVLALNRFL 573
           G+L +      L++F+
Sbjct: 157 GILYIGIIGFLLDQFI 172



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 33/195 (16%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  ++    + + +F      L   +  +  ++  I  I  SIP +  L  T+V F  
Sbjct: 10  LTSLQKLFVGYIPAAIFGSFIGYLIGINVAVYQLMRRIFQIPNSIPPIAVLPLTLVIFQE 69

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV-SRSFRLSGWQKFWYLG 184
                   +E A    IF + +W +T +    + +  R      +  F  S         
Sbjct: 70  --------SESAIAVVIFMASLWTITINTAMGIQHFRRQNNNFRAVIFHTSH-------- 113

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                      + + +   WF V+A EM+      +   G+G+ +  + K  +   I+  
Sbjct: 114 ----------ALKVGIWVAWFTVIAIEML------LASKGLGALLWNSYKSGNSNYIIEG 157

Query: 245 MLTMLGVIFLYDQLL 259
           +L +  + FL DQ +
Sbjct: 158 ILYIGIIGFLLDQFI 172


>gi|186681910|ref|YP_001865106.1| binding-protein-dependent transporters inner membrane component
           [Nostoc punctiforme PCC 73102]
 gi|186464362|gb|ACC80163.1| binding-protein-dependent transport systems inner membrane
           component [Nostoc punctiforme PCC 73102]
          Length = 186

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 27/195 (13%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      ++ R+ V  I A+++   +G  IG    I    +   Q+  + P     P+ +
Sbjct: 1   MFLDILASLQRLFVGYIPAAVLGSFIGYLIGMNSMIYQLFRLMFQIPHSIPPIALLPIAL 60

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                         + ++  GT W ++ N   G   F                  +R  I
Sbjct: 61  IVFQ----ESESAATTVVFLGTLWTMIINTAIGMQHFRRQNNN------------FRVAI 104

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                 +       +   AW   I  E+ +         GLG  + E+ + G+   ++  
Sbjct: 105 F-----HIFHALKVSIWVAWFIVISIEMLTGPK------GLGFTLWEAYKAGNADYIIQV 153

Query: 559 VLIMCCFVLALNRFL 573
           +L +      L++ L
Sbjct: 154 ILYIGIIGFLLDQLL 168



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 31/194 (15%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+    + + +       L   +  +  +   +  I  SIP +  L   ++ F  
Sbjct: 6   LASLQRLFVGYIPAAVLGSFIGYLIGMNSMIYQLFRLMFQIPHSIPPIALLPIALIVFQE 65

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   +E AA   +F   +W M  +    + +  R                 + +  
Sbjct: 66  --------SESAATTVVFLGTLWTMIINTAIGMQHFRRQNNN-------------FRV-- 102

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
             ++  +   + +S+   WF V++ EM+          G+G  +  A K  +   I+  +
Sbjct: 103 --AIFHIFHALKVSIWVAWFIVISIEMLTG------PKGLGFTLWEAYKAGNADYIIQVI 154

Query: 246 LTMLGVIFLYDQLL 259
           L +  + FL DQLL
Sbjct: 155 LYIGIIGFLLDQLL 168


>gi|330877457|gb|EGH11606.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 271

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           M L N  P    R I     F LL F   +G    L     +  +P  +     +     
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAVQMADAVNRMAF 60

Query: 60  S---------LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           +         L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  TADTRTGDYLLWQDSASSLKRLAIGLGISALLGLCLGIAAGILPLFGTPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLKRLAIGLGISALLGLCLGIAAGILPLFGTPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     ++LP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVVLPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|194017836|ref|ZP_03056445.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
 gi|194010488|gb|EDW20061.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
          Length = 264

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT+F  V+  ++ +   I +   + +   +++ + P+  +L A P     P+
Sbjct: 68  GSLMNHMSITLFETVLGFLLGTFCGILLAAALWWSTRLANVLDPYLVILNAMPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +    ++     +++ +  T       +         ++ +V  +F       +R 
Sbjct: 128 LIVALGPGMISIVAMGAIISVIITT----IVIYTAFQEVDENYLKVMKTFGAKKSVVFRE 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++      G +W   IV E        + + GLG  I    +  +F  V 
Sbjct: 184 VILPASIPTMISAIKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLVF 237

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           L + I+  F   + + +      +  R  
Sbjct: 238 LSLFIIAVFATIMYQLV-----EWLERRF 261



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   SL  + S T    +   ++      + A     S RL  VL P
Sbjct: 52  SSPSAVCQLFVQKIQDGSLMNHMSITLFETVLGFLLGTFCGILLAAALWWSTRLANVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V      PG +    + AI ++  +     T  +Y +   + 
Sbjct: 112 YLVILNAMPKVALAPILIVALG---PGMISIVAMGAIISVIIT-----TIVIYTAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F       F  + +P S+P ++  + +++   W  V+  E +V        
Sbjct: 164 ENYLKVMKTFGAKKSVVFREVILPASIPTMISAIKVNVGLSWVGVIVGEFLVSSK----- 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +  ++  +     +  QL+
Sbjct: 219 -GLGYMIIYGFQVFNFTLVFLSLFIIAVFATIMYQLV 254


>gi|171321952|ref|ZP_02910839.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171092751|gb|EDT38031.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 271

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 100/249 (40%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AF  +  + +       +  VP   +   +   LD   L    S T  R+     I   
Sbjct: 33  VAFAALWWLASAQRWFPPQIVVPPGRLAATLRTLLDTGELRDNLSITLHRLALGFAIGAT 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L A+SR     L P  D+++ +P L  +   ++      P K++    A  F 
Sbjct: 93  GGAAFGILLARSRLFADYLRPTFDLLRQLPTLTLIPLLILLIGVDEPLKLVVVGKAVFF- 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + Y  + + PRDL E++R + L  +     + +P ++P L+  + ++++
Sbjct: 152 -------PVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDVLLPAALPPLLTGVRIALA 204

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  +VA E++          GIG  + LA +   L  +L  +  +  + F  D+   L
Sbjct: 205 RAWLALVAVELLSADS------GIGQMMELARQMLRLDVVLVDVAAIGLIGFALDRSIAL 258

Query: 259 LFRPMIVWS 267
           + R  + W 
Sbjct: 259 VQRYALRWQ 267



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 83/263 (31%), Gaps = 17/263 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----- 370
             R L                 +   + +    F  +  +A    W     +V       
Sbjct: 2   AIRALAPNGLRAVRLPSVARLGEHALWWITPVAFAALWWLASAQRWFPPQIVVPPGRLAA 61

Query: 371 --FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
              T  D   +     IT+ R+ +   I +      GI +      +  ++P   LL   
Sbjct: 62  TLRTLLDTGELRDNLSITLHRLALGFAIGATGGAAFGILLARSRLFADYLRPTFDLLRQL 121

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P       ++  +            +++     + +      G    P D  E+A  + +
Sbjct: 122 PTLT----LIPLLILLIGVDEPLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMARHYGL 177

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +   R ++LP   P  +TG   A   AW A +  E+ S        +G+G  +  + +
Sbjct: 178 GRFALLRDVLLPAALPPLLTGVRIALARAWLALVAVELLS------ADSGIGQMMELARQ 231

Query: 549 KGSFPEVVLGVLIMCCFVLALNR 571
                 V++ V  +     AL+R
Sbjct: 232 MLRLDVVLVDVAAIGLIGFALDR 254


>gi|157693794|ref|YP_001488256.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus pumilus SAFR-032]
 gi|194015623|ref|ZP_03054239.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Bacillus pumilus ATCC 7061]
 gi|157682552|gb|ABV63696.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Bacillus pumilus
           SAFR-032]
 gi|194013027|gb|EDW22593.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Bacillus pumilus ATCC 7061]
          Length = 217

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 81/205 (39%), Gaps = 19/205 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L A+V+ ++       +  + +R    ++ +++I Q++P L  L F
Sbjct: 13  GELLTKMWEHLYISLIAVVLGIIVAVPLGVVLTRMKRGAGFVIGVVNIFQTLPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ AI A+F   V  +  + Y  +  + ++L E  +   ++ W+
Sbjct: 73  FIPILGVG--------KIPAIVALFFYSVLPILRNTYAGVQGVNKNLLESGKGIGMTTWE 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +   + +P ++P ++  +  S     GW  + A          I   G+G YI + ++  
Sbjct: 125 QIRLVELPLAVPIIMAGVRTSTIYLIGWTTLAA---------FIGGGGLGDYILIGLQLY 175

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
               I+   + +  +  + D  L +
Sbjct: 176 QPEYIIAGAIPVTILAVIIDFTLMK 200



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +++  I+ +P+G+ +      +  +     +    P+       +  +     
Sbjct: 23  LYISLIAVVLGIIVAVPLGVVLTRMKRGAGFVIGVVNIFQTLPSLAILAFFIPILGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N  AG      +  E      +T W   R + LP   P  
Sbjct: 81  --KIPAIVALFFYSVLPILRNTYAGVQGVNKNLLESGKGIGMTTWEQIRLVELPLAVPII 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI    +      ++ G + +    
Sbjct: 139 MAGVRTSTIYLIGWTTLAAFIGGG-------GLGDYILIGLQLYQPEYIIAGAIPVTILA 191

Query: 567 LALN 570
           + ++
Sbjct: 192 VIID 195


>gi|111221009|ref|YP_711803.1| putative ABC transporter permease [Frankia alni ACN14a]
 gi|111148541|emb|CAJ60213.1| putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 252

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 80/256 (31%), Gaps = 17/256 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P++   +  +     +  +LH  +      D V          +L      T   ++ 
Sbjct: 1   MWPSVLVGIVLLGAWEFVTRVLHVEEYILPAPDQVATTLADRWDSTLRSATWVTGTEIVL 60

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              +S+            S      L P+L   Q++P++       + F      K+I  
Sbjct: 61  GFALSVAGGLALGCALHFSAAARRALYPLLIGSQTVPVVVLAPILAIIFGYSITPKLILV 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F         +       L ++  +L  + R+        F  +  P ++P +  
Sbjct: 121 ALICFF--------PVVVGTLDGLASVDPELVRMMRTLHGRRVAIFTRVEFPAALPSVFT 172

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGV 251
            + ++ +      V       G+      G+G  +   + +     +  A++    M   
Sbjct: 173 GLRLAAAYAATGAV------FGEYSGASDGLGHVMRQGVPQLQSALVFAAIVLLTAMSVA 226

Query: 252 IFLYDQLLFRPMIVWS 267
           +F       R ++ W 
Sbjct: 227 LFAIVNGAERLLVPWH 242



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 60/185 (32%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   +V+   ++    + +G  + F       + P        P  V  P++     Y 
Sbjct: 53  VTGTEIVLGFALSVAGGLALGCALHFSAAARRALYPLLIGSQTVPVVVLAPILAIIFGYS 112

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    +L+     + ++   + G ++   +   +  + H      +  +  P   P
Sbjct: 113 ----ITPKLILVALICFFPVVVGTLDGLASVDPELVRMMRTLHGRRVAIFTRVEFPAALP 168

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   A   A   ++  E          + GLG  + +   +     V   ++++  
Sbjct: 169 SVFTGLRLAAAYAATGAVFGEY------SGASDGLGHVMRQGVPQLQSALVFAAIVLLTA 222

Query: 565 FVLAL 569
             +AL
Sbjct: 223 MSVAL 227


>gi|28871381|ref|NP_794000.1| ABC transporter permease [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213971140|ref|ZP_03399259.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301381843|ref|ZP_07230261.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059012|ref|ZP_07250553.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302132811|ref|ZP_07258801.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28854632|gb|AAO57695.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213924129|gb|EEB57705.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato
           T1]
 gi|331015579|gb|EGH95635.1| ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 271

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           M L N  P    R I     F LL F   +G    L     +  +P  +     +     
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAVQMADAVNRMAF 60

Query: 60  S---------LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           +         L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  TADTRTGDYLLWQDSASSLKRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPIELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLKRLAIGLGISALLGLCLGIAAGILPLFGAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     ++LP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPIELLIKAQTLGASTWTLILRVVLPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|228989857|ref|ZP_04149834.1| ABC transporter, permease [Bacillus pseudomycoides DSM 12442]
 gi|228769792|gb|EEM18378.1| ABC transporter, permease [Bacillus pseudomycoides DSM 12442]
          Length = 228

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 66/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     I     P        P     PL V    Y 
Sbjct: 36  ATLYVVLIGVVISIVLGVGLAMSMNASKWIERAFYPLLVASQTIPITALAPLFVLWFGYS 95

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 96  ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALP 151

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 152 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 205

Query: 565 FVLALNRFL 573
             +    F+
Sbjct: 206 LAILFVLFV 214



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T   +L  +VIS++     A     S+ +     P+L   Q+IPI       V
Sbjct: 30  LTVHLPATLYVVLIGVVISIVLGVGLAMSMNASKWIERAFYPLLVASQTIPITALAPLFV 89

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F          +  + +        + +  + Y  L +  ++ EE+  ++  +    F
Sbjct: 90  LWFGY--------SIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIF 141

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   
Sbjct: 142 LKLKLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAG 195

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   ++ +  +  L+   +
Sbjct: 196 VFAPIVLLSLLAILFVLFV 214


>gi|169828509|ref|YP_001698667.1| ABC transporter permease [Lysinibacillus sphaericus C3-41]
 gi|168992997|gb|ACA40537.1| Hypothetical ABC transporter permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 257

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +AF+L I  + + +  +    +P   + +        +   +A  T    L  + I + 
Sbjct: 13  FIAFLLFIWELVVHIADVPPWLLPAPSIILKEGFQSYQTFLPHALATVELALLGLAIGVG 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +  +   +  +  PIL + Q+IPIL      +++F      K+I   L   F 
Sbjct: 73  CGLTVAIVLHRFTFIRSLFYPILIMSQNIPILVLAPLLIIWFGFGLLPKLIIICLVCFFP 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +                +L+        +  Q FW L  P + P +   + ++ +
Sbjct: 133 IVIAAM--------DGFRQTAPELKHYFEMIGATKAQTFWKLEWPHAYPAIFSGIKIAAT 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E +          GIG Y+ LA        +  A+  ++ +  + 
Sbjct: 185 YSVMGAVIAEWLGAKK------GIGVYMTLAQSSFRTDRVFVAIFAIVLLSLML 232



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 10/241 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +  LQ          L   W  VV    +         I+    +Q     +     T+ 
Sbjct: 2   KRALQKGRTIMFIAFLLFIWELVVHIADVPPWLLPAPSIILKEGFQSYQTFLPHALATVE 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++ + I     + V I +     I S   P   +    P  V  PL++    +  L  
Sbjct: 62  LALLGLAIGVGCGLTVAIVLHRFTFIRSLFYPILIMSQNIPILVLAPLLIIWFGFGLL-- 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                +++     + I+   + G      + K        T  + +  +  P  +P   +
Sbjct: 120 --PKLIIICLVCFFPIVIAAMDGFRQTAPELKHYFEMIGATKAQTFWKLEWPHAYPAIFS 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   +   ++++E            G+G Y+  +        V + +  +    L 
Sbjct: 178 GIKIAATYSVMGAVIAEWLG------AKKGIGVYMTLAQSSFRTDRVFVAIFAIVLLSLM 231

Query: 569 L 569
           L
Sbjct: 232 L 232


>gi|323138299|ref|ZP_08073370.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
 gi|322396382|gb|EFX98912.1| binding-protein-dependent transport systems inner membrane
           component [Methylocystis sp. ATCC 49242]
          Length = 268

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 77/185 (41%), Gaps = 7/185 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   +  ++IA++  + + + +     +   + PFA +L   P     PL++      
Sbjct: 67  VTLGETLKALVIATVCGVALALLLAQSKWLERALLPFAIVLQVTPIIAIAPLLLV----- 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +L P   + +       + IL N   G ++  +  +++   +  + W+   Y+ LP   P
Sbjct: 122 YLQPRTAVLVCAFLVAFFPILSNTSLGLASVDHGLRDLFDLYRASPWQKLVYLRLPAALP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            ++TG     G +   +IV+E+A+              I E+  +   P +   + ++  
Sbjct: 182 QFLTGLRIGGGLSLIGAIVAELAAGAAGQGTGLA--FRIVEAGFRLDIPRMFAALALISV 239

Query: 565 FVLAL 569
             LA+
Sbjct: 240 TGLAI 244



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 11/188 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    L A+VI+ +     A L A+S+ L   L+P   ++Q  PI+      +VY     
Sbjct: 68  TLGETLKALVIATVCGVALALLLAQSKWLERALLPFAIVLQVTPIIAIAPLLLVYLQ--- 124

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A +   F    + +  +    L ++   L ++   +R S WQK  YL +P 
Sbjct: 125 ------PRTAVLVCAFLVAFFPILSNTSLGLASVDHGLRDLFDLYRASPWQKLVYLRLPA 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P  +  + +   GG   + A    +         G+   I  A    D+  +  A+  
Sbjct: 179 ALPQFLTGLRI--GGGLSLIGAIVAELAAGAAGQGTGLAFRIVEAGFRLDIPRMFAALAL 236

Query: 248 MLGVIFLY 255
           +       
Sbjct: 237 ISVTGLAI 244


>gi|88813585|ref|ZP_01128817.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Nitrococcus mobilis Nb-231]
 gi|88789147|gb|EAR20282.1| ABC transproter, fused inner membrane component and
           substrate-binding domain [Nitrococcus mobilis Nb-231]
          Length = 510

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 15/196 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
            +    +     L             A+ ++ L     +    +S RL  +++ +  ++Q
Sbjct: 297 GESATQSHRWSRLGTNLIEHLQLTGIALGLACLVGLPLSLAVYRSPRLARIVLYVAGLLQ 356

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           +IP +  L   +  F            L A+ A+F   +  +  +   +L  +   L  V
Sbjct: 357 TIPSIALLALMIPLFGIGV--------LPAVIALFLYSLLPIVRAAITALLTVDPLLVNV 408

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +    L+  ++  ++ +P +MP L+  +  +          +  I  G       G+G  
Sbjct: 409 ASGIGLTKAEQLRHVILPLAMPNLLTGIRTAAIINIGTATLAAFIGAG-------GLGEP 461

Query: 229 IALAIKEQDLLAILYA 244
           I   +   D   +LY 
Sbjct: 462 IVTGLALNDYQLVLYG 477



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 11/167 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + + +A ++ +P+ + +   P ++  +   A LL   P+     L++           L 
Sbjct: 322 IALGLACLVGLPLSLAVYRSPRLARIVLYVAGLLQTIPSIALLALMIPLFGIG----VLP 377

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + +   +   I+   I            VAS   +T     R++ILP   P  +TG  
Sbjct: 378 AVIALFLYSLLPIVRAAITALLTVDPLLVNVASGIGLTKAEQLRHVILPLAMPNLLTGIR 437

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           TA       + ++     G       GLG  I        +  V+ G
Sbjct: 438 TAAIINIGTATLAAFIGAG-------GLGEPIVTGLALNDYQLVLYG 477


>gi|49484664|ref|YP_041888.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|82752043|ref|YP_417784.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
 gi|257423930|ref|ZP_05600359.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426613|ref|ZP_05603015.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429248|ref|ZP_05605635.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257431894|ref|ZP_05608257.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257434855|ref|ZP_05610906.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258425010|ref|ZP_05687881.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus A9635]
 gi|282902363|ref|ZP_06310256.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906791|ref|ZP_06314639.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282909767|ref|ZP_06317576.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282915308|ref|ZP_06323085.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282921031|ref|ZP_06328749.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925937|ref|ZP_06333585.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|283959231|ref|ZP_06376672.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293497703|ref|ZP_06665557.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293511283|ref|ZP_06669979.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus M809]
 gi|293549891|ref|ZP_06672563.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|295429036|ref|ZP_06821658.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297589472|ref|ZP_06948113.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|49242793|emb|CAG41518.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82657574|emb|CAI82018.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
 gi|257272948|gb|EEV05050.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276244|gb|EEV07695.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279729|gb|EEV10316.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257282773|gb|EEV12905.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257285451|gb|EEV15567.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257844844|gb|EEV68887.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus A9635]
 gi|282312766|gb|EFB43170.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|282315446|gb|EFB45830.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282321029|gb|EFB51363.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282326341|gb|EFB56645.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282329690|gb|EFB59211.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282596822|gb|EFC01781.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|283788823|gb|EFC27650.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290918938|gb|EFD96014.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291096634|gb|EFE26892.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291465909|gb|EFF08439.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus M809]
 gi|295126795|gb|EFG56439.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297577983|gb|EFH96696.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|315194948|gb|EFU25336.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 211

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGVDALL 195



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|312198429|ref|YP_004018490.1| ABC transporter permease [Frankia sp. EuI1c]
 gi|311229765|gb|ADP82620.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 309

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 11/261 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYA 65
            F++R + P +   +       +  + L   Q   +P     +     D  +L    +  
Sbjct: 51  GFVNRFLLPLVVFAVFIGGWYLVTWLALTPQQRFMLPFPHEVVRVGFFDWSNLKAILEAL 110

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T +     + IS++   + A L  +++ L   L P   ++Q++PIL        +F  
Sbjct: 111 KYTCIVTFIGLGISIVLGVLAAILMNQAKWLENGLYPWAVVLQTVPILALTPVLSFFFGF 170

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               + I   + A F I ++ ++         L ++ R + E+    R     + W L +
Sbjct: 171 ALTSRTIVCVIIAFFPIVSNTLF--------GLQSVDRGMHELFSLHRTGRLTRLWKLQL 222

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +     ++        +  E             +  Y +    E+     + A 
Sbjct: 223 PAAMPAMFAGFRVAAGLSVIGAIVGEFFFKQGNAGLGTNLSVYSSRLEGERLWATTIVAS 282

Query: 246 LTMLGVIFLYDQLLFRPMIVW 266
           L  + V   +  L  R +  W
Sbjct: 283 LLGIAVFVFFGWLSRRVVGRW 303



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 82/260 (31%), Gaps = 8/260 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R  G + F        +     +     + W  +       + +      V  F +
Sbjct: 41  AGAFRLRGAVGFVNRFLLPLVVFAVFIGGWYLVTWLALTPQQRFMLPFPHEVVRVGFFDW 100

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++  ++     T     + + I+ ++ +   I +     + + + P+A +L   P    
Sbjct: 101 SNLKAILEALKYTCIVTFIGLGISIVLGVLAAILMNQAKWLENGLYPWAVVLQTVPILAL 160

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++     +   +     +++ +    + I+ N + G  +      E+ S         
Sbjct: 161 TPVLSFFFGFALTS----RTIVCVIIAFFPIVSNTLFGLQSVDRGMHELFSLHRTGRLTR 216

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P    G   A G +   +IV E            GLG  ++  + +    
Sbjct: 217 LWKLQLPAAMPAMFAGFRVAAGLSVIGAIVGEFF----FKQGNAGLGTNLSVYSSRLEGE 272

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +    ++     +A+  F 
Sbjct: 273 RLWATTIVASLLGIAVFVFF 292


>gi|187929853|ref|YP_001900340.1| glycine betaine ABC transporter substrate-binding protein
           [Ralstonia pickettii 12J]
 gi|187726743|gb|ACD27908.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Ralstonia pickettii 12J]
          Length = 504

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 29/244 (11%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P               L +   R  + +  +  +++L       +AA+      +L  
Sbjct: 286 NAPAATPTRAFFARLTDGLGRLTQRHLVLVGISTGVAVLLGVPLGLVAARRPIKQPILA- 344

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ ++Q+IP L  L   +    ++         + A+ A+    +  +  +    L  +P
Sbjct: 345 IVGVLQTIPSLALLAMLIPVVGSIG-------VVPALIALAVYALLPIVRNTIVGLEQVP 397

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L + + +  L+  Q+   + +P ++P ++  +             + +I VG   I  
Sbjct: 398 DGLRDAALALGLTPSQRTRVVDLPLALPVILAGVKT-----------AAVISVGTATIAA 446

Query: 223 P----GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278
                G G  IA  +   D  A L A      V+ L  Q  F  +  W    RL R +G 
Sbjct: 447 FIGAGGYGERIATGLALND-SATLLAGAIPAAVLALLVQAAF-ELAEW----RLRRRSGS 500

Query: 279 YPAD 282
            P  
Sbjct: 501 TPPR 504



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V +   +A ++ +P+G+    RP I   I     +L   P+     +++  V    +
Sbjct: 312 LVLVGISTGVAVLLGVPLGLVAARRP-IKQPILAIVGVLQTIPSLALLAMLIPVVGSIGV 370

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +  +T  +  R + LP   P  
Sbjct: 371 VPAL---IALAVYALLPIVRNTIVGLEQVPDGLRDAALALGLTPSQRTRVVDLPLALPVI 427

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA   +   + ++     G       G G  IA          ++ G +      
Sbjct: 428 LAGVKTAAVISVGTATIAAFIGAG-------GYGERIATGLALNDSATLLAGAIPAAVLA 480

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +        +      LR
Sbjct: 481 LLV-----QAAFELAEWRLR 495


>gi|149197461|ref|ZP_01874512.1| ABC transporter, permease protein [Lentisphaera araneosa HTCC2155]
 gi|149139479|gb|EDM27881.1| ABC transporter, permease protein [Lentisphaera araneosa HTCC2155]
          Length = 254

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 6/227 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L + W  V+   +I          +     +    ++     +    +   +++ I   
Sbjct: 12  LLLLTWEAVIHLFSINPFILPFPITIVKTCIEYKSELLKASLNSGLIAICGFLLSLIGGS 71

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +   +     I + + P+A  L + P     P+ +        +    + L+    + +
Sbjct: 72  LISFCMSQSKLIENSLYPYAIFLQSVPIVAIAPIFILWFGAGTQS----MILIAFIVSLF 127

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+  V  G +        +   +    W     I +P   P  VTGA T+ G A   SI
Sbjct: 128 PIITTVTTGLTRIDTQLLSLMKFYKARKWDIMIKIRIPSAIPNLVTGAKTSAGLAVVGSI 187

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           V E  +   +   + GL   I  + +  ++P +             +
Sbjct: 188 VGEYFTG--LSGESRGLAYLIQSNQQNANYPYLFASSFCAAFLGWLI 232



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 10/225 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                  +L+     I L  I    +P  I  +         L + +  + L  +   ++
Sbjct: 6   PLSFFILLLLTWEAVIHLFSINPFILPFPITIVKTCIEYKSELLKASLNSGLIAICGFLL 65

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SL+   + +   ++S+ +   L P    +QS+PI+      +++F       ++ A + +
Sbjct: 66  SLIGGSLISFCMSQSKLIENSLYPYAIFLQSVPIVAIAPIFILWFGAGTQSMILIAFIVS 125

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I T+        +   L  I   L  + + ++   W     + +P ++P LV     
Sbjct: 126 LFPIITT--------VTTGLTRIDTQLLSLMKFYKARKWDIMIKIRIPSAIPNLVTGAKT 177

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           S        +  E            G+   I    +  +   +  
Sbjct: 178 SAGLAVVGSIVGEYFTGLSGESR--GLAYLIQSNQQNANYPYLFA 220


>gi|283471668|emb|CAQ50879.1| OpuCB [Staphylococcus aureus subsp. aureus ST398]
          Length = 211

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDIELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGVDALL 195



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + I LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDIELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|221198865|ref|ZP_03571910.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221205125|ref|ZP_03578141.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221174916|gb|EEE07347.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221181316|gb|EEE13718.1| nitrate/sulfonate/taurine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 274

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 6/252 (2%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           +    +      +  +      ++  L + W  V     +          ++    +D  
Sbjct: 5   KRARRMPLMQRPHVQRAAIPAMLALALLLVWQTVSVVGHVPSYLVPSPLEISTTLVRDWA 64

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T+   ++    A ++ + +         I + + P+A LL   P     PL+
Sbjct: 65  LLGASLLFTLKITLLSFFTAVVVGVLLAFVFVQSRMIETALFPYAVLLQVTPIVAIAPLI 124

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +       L   +  +L+      + I+ N   G  +              +  +    +
Sbjct: 125 IIWAQNTTLALVICSTLV----AVFPIISNTTLGLRSVSPGLLAYFRLQRASRLQVLLRL 180

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY+      A G A   ++V+E  +        TGL   I ++  + + P +  
Sbjct: 181 RVPCALPYFFGALRIAGGLALIGAVVAEFVAG--TGGSNTGLAYQILQAGYQMNIPRLFA 238

Query: 558 GVLIMCCFVLAL 569
            ++++    + L
Sbjct: 239 ALVLISLVGITL 250



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 76/213 (35%), Gaps = 10/213 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            VP  +     +  D   L      T    L +   +++   + A +  +SR +   L P
Sbjct: 48  LVPSPLEISTTLVRDWALLGASLLFTLKITLLSFFTAVVVGVLLAFVFVQSRMIETALFP 107

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
              ++Q  PI+      +++  N     VI + L A+F I +        +    L ++ 
Sbjct: 108 YAVLLQVTPIVAIAPLIIIWAQNTTLALVICSTLVAVFPIIS--------NTTLGLRSVS 159

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L    R  R S  Q    L VP ++P     + ++        V +E   V  T    
Sbjct: 160 PGLLAYFRLQRASRLQVLLRLRVPCALPYFFGALRIAGGLALIGAVVAEF--VAGTGGSN 217

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            G+   I  A  + ++  +  A++ +  V    
Sbjct: 218 TGLAYQILQAGYQMNIPRLFAALVLISLVGITL 250


>gi|149190075|ref|ZP_01868352.1| ABC transporter permease protein [Vibrio shilonii AK1]
 gi|148836105|gb|EDL53065.1| ABC transporter permease protein [Vibrio shilonii AK1]
          Length = 268

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 104/253 (41%), Gaps = 19/253 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAMVIS 79
           L++F++++G+   ++   +  +      + V + L      L ++   TT  +L  +++ 
Sbjct: 30  LVSFLIILGLWKAIVVLFELPSFILPAPEAVLVKLVERQDVLLKHTWVTTQEILLGLLLG 89

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L     +A      + +   L+PIL   Q+IP+       +++       KV+ A L   
Sbjct: 90  LSMGLFFALQMLLFQPVKRWLLPILITSQAIPVFALAPILMLWLGYGIASKVVMAALIIF 149

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F + T          Y  L N P    ++S++   S +++ W++ +P S+P L   + ++
Sbjct: 150 FPVTTCC--------YDGLRNTPVGYLDLSQTMGASRFRQLWHIRLPASLPVLASGIRVA 201

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL- 258
           +      VVA    V G+ V    G+G  +  A     +  +  A+  +  V        
Sbjct: 202 V------VVAPIGAVAGEWVGSSEGLGYLMLQANARMLIDEMFAALFILASVSVALYFFT 255

Query: 259 --LFRPMIVWSNK 269
               + +I W NK
Sbjct: 256 DWGLKRLIPWENK 268



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 106 VKRWLLPILITSQAIPVFALAPILMLWLGYGIASKVVMAALIIFF----PVTTCCYDGLR 161

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + +++ +   + +R   +I LP   P   +G   A   A   ++  E        
Sbjct: 162 NTPVGYLDLSQTMGASRFRQLWHIRLPASLPVLASGIRVAVVVAPIGAVAGEWVG----- 216

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    +AL
Sbjct: 217 -SSEGLGYLMLQANARMLIDEMFAALFILASVSVAL 251


>gi|78060665|ref|YP_367240.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965215|gb|ABB06596.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 217

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 82/203 (40%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ I  I+ ++P +   
Sbjct: 10  SWPELLQLTLQHIWLVGIAVGCAIVAGVPLGILINRHDWLAGPLLGIATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              + +F     G        AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPFFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALHNVDAGIKEAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + ++  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVVGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D+LL
Sbjct: 180 SMMKLLVGAVLVSLLAIVADRLL 202



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    ++ V + +  A +  +P+GI I     ++  +   A ++   P+   F 
Sbjct: 11  WPELLQLTLQHIWLVGIAVGCAIVAGVPLGILINRHDWLAGPLLGIATIVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   S +        ++  +   +   I+ N            KE  +   +T W+  
Sbjct: 71  LMIPFFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALHNVDAGIKEAGTGIGMTSWQRL 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA         ++ V   G       GLG  I  +  + S  +
Sbjct: 131 RLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVVGAG-------GLGTLILRAIGQSSMMK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +++G +++    +  +R L
Sbjct: 184 LLVGAVLVSLLAIVADRLL 202


>gi|322807486|emb|CBZ05061.1| hydroxymethylpyrimidine ABC transporter,transmembrane component
           [Clostridium botulinum H04402 065]
          Length = 198

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT +  ++  I  +++   + I + +       + P+  +L A P     P+++  V   
Sbjct: 7   ITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPIIIFWVG-- 64

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N    + ++ +  +    + +V+ G     ND   +  +F  T W+   ++I+P   P
Sbjct: 65  --NGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQILIHLIIPATIP 122

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G +W   I+ E        +   GLG  I    +      V+  ++I+  
Sbjct: 123 TLISTLKINVGLSWVGVIMGEFL------VAKEGLGFLIIYGGQISQLDMVMFSIIILAI 176

Query: 565 FVLAL 569
               +
Sbjct: 177 LAYLM 181



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 14/193 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++   T    +   +   L     A L   S     VL P + ++ ++P +      + +
Sbjct: 3   KHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPIIIFW 62

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N     ++ A L +I             S+      +  D   + ++F  + WQ   +
Sbjct: 63  VGNGTNAIIMIALLISIVV--------TIISVLNGFKEVDNDKIRLMKTFGATKWQILIH 114

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P ++P L+  + +++   W  V+  E +V  +      G+G  I    +   L  ++
Sbjct: 115 LIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKE------GLGFLIIYGGQISQLDMVM 168

Query: 243 YAMLTMLGVIFLY 255
           ++++ +  + +L 
Sbjct: 169 FSIIILAILAYLM 181


>gi|167719687|ref|ZP_02402923.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 270

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 63  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 122

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 123 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGLR 174

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 175 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 232

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 233 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 263



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 83/273 (30%), Gaps = 9/273 (3%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + +L   LGV R    +   +      +    +I    V   + +     +     +  
Sbjct: 1   PLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAHGV 60

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              ++   I +    + R      +   +   +             +     +    P+ 
Sbjct: 61  ANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSI 117

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL +        +    L  +++    W +  +  AG  A P   + V  ++ +TG 
Sbjct: 118 ALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGL 173

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R    I++P   P  + G   A   AW   I +E+             G YI ++  +  
Sbjct: 174 RHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELY 231

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
              V  G+  +    L +   ++  L     + 
Sbjct: 232 TDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 264


>gi|91225725|ref|ZP_01260754.1| Probable inner-membrane permease [Vibrio alginolyticus 12G01]
 gi|91189614|gb|EAS75889.1| Probable inner-membrane permease [Vibrio alginolyticus 12G01]
          Length = 218

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 80/205 (39%), Gaps = 10/205 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L          +  A+ +++L       L  ++ R   V++ +  I+ +IP +   
Sbjct: 10  NLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERAAKVVLYVASIIITIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      + A+  +       +  + Y ++ N+   L E +R   ++ 
Sbjct: 70  GLMIPLLSTIGHGI---GYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGMTP 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q+   + +P ++P ++  +  ++      +  +  I  G       G+G +I+  I + 
Sbjct: 127 FQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D   ++   + +  +  + D  L R
Sbjct: 180 DPRQLIVGAIAVSLLAIIADYGLIR 204



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           +FT  ++  +  L    +  V + + +A +  +P+GI I      +  +   A ++   P
Sbjct: 5   NFTIDNLALLGTLTMEHISLVALAVGLAILTGVPIGILITQNERAAKVVLYVASIIITIP 64

Query: 430 ANVFFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++  +S   H    +   + ++  +Q  I+ N            +E A    +
Sbjct: 65  SIALFGLMIPLLSTIGHGIGYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T ++  + + +P   P  + G  TA         ++     G       GLG +I+    
Sbjct: 125 TPFQRLKMVEIPLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +    ++++G + +    +  +  L  
Sbjct: 178 QSDPRQLIVGAIAVSLLAIIADYGLIR 204


>gi|59713501|ref|YP_206276.1| taurine transporter permease subunit [Vibrio fischeri ES114]
 gi|59481749|gb|AAW87388.1| taurine transporter permease subunit [Vibrio fischeri ES114]
          Length = 272

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 95/254 (37%), Gaps = 20/254 (7%)

Query: 18  NIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           N+   +  + +   I +           P  +   +    DV  L +++  T   +L  +
Sbjct: 32  NVISAIVILGLWQFIVMAFALPSFILPSPFSVFSQLIERYDV--LLEHSWITAQEILLGL 89

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + L    ++A        L   L+PIL   Q+IP+       +++       KV+ A L
Sbjct: 90  GLGLSMGLLFALQMLLFDPLRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAAL 149

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
              F + T          Y  L N P    +++ +   S W    Y+ +P ++P L   +
Sbjct: 150 IIFFPVTTCC--------YDGLRNTPTGYLDLAHTMGASKWAILKYVRLPAALPTLASGI 201

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      VVA    VVG+ V    G+G  +  A     +  +  A+  + G+     
Sbjct: 202 RVAV------VVAPIGAVVGEWVGSSKGLGYLMLQANARMMIDEMFAALFILAGLSVSLY 255

Query: 257 QL---LFRPMIVWS 267
            L   L + +I W 
Sbjct: 256 FLADVLIKKLIPWQ 269



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 109 LRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAALIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W   +Y+ LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPTGYLDLAHTMGASKWAILKYVRLPAALPTLASGIRVAVVVAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSKGLGYLMLQANARMMIDEMFAALFILAGLSVSL 254


>gi|49480279|ref|YP_034982.1| ABC transporter permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118476402|ref|YP_893553.1| hydroxymethylpyrimidine ABC transporter permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|196046683|ref|ZP_03113906.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|225862705|ref|YP_002748083.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|228913416|ref|ZP_04077047.1| ABC transporter, permease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229183059|ref|ZP_04310289.1| ABC transporter, permease [Bacillus cereus BGSC 6E1]
 gi|49331835|gb|AAT62481.1| ABC transporter, permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118415627|gb|ABK84046.1| hydroxymethylpyrimidine ABC transporter, permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|196022395|gb|EDX61079.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|225786103|gb|ACO26320.1| putative ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|228600198|gb|EEK57788.1| ABC transporter, permease [Bacillus cereus BGSC 6E1]
 gi|228846167|gb|EEM91188.1| ABC transporter, permease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 250

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L I+         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|332364133|gb|EGJ41910.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK49]
          Length = 281

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 95/242 (39%), Gaps = 16/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 40  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 98

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 99  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 153 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFY 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 211 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIILVSVIS 263

Query: 254 LY 255
           L 
Sbjct: 264 LL 265



 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 50  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 109

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 110 ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 165

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 166 PIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 225

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 226 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 270


>gi|260432017|ref|ZP_05785988.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415845|gb|EEX09104.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 244

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 14/244 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F L I    + L G+ +  +P   +       +   + ++   T + +L  +    +  
Sbjct: 11  LFALAIWQAIVTLTGLPKFILPGPALVAETWWQNRWLIAEHTWITAIEVLIGLACGTVLG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A SR   +++ P+L   Q++P+        ++       KV  A L   F   
Sbjct: 71  VITALQLANSRAARVLVQPMLVFTQALPVFALAPLLTLWLGYGLWSKVAMAVLIIYF--- 127

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T S +  L   P+   +++R+ + S     W + +P ++P L   M ++    
Sbjct: 128 -----PITSSFFDGLMRTPQGYLDLARTMQASPRSVLWNIRIPAALPSLASGMRLA---- 178

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              V A    V+G+ V    G+G  + LA        +  AMLT+     L    + R  
Sbjct: 179 --AVYAPIGAVIGEWVGSSQGLGYLMLLANGRAKTDLMFAAMLTLGVFSILLHLAVRRAT 236

Query: 264 IVWS 267
              +
Sbjct: 237 ARMA 240



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 79/250 (31%), Gaps = 10/250 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++  S    +      W  +V    +         +V    +Q+   +     IT   V+
Sbjct: 1   MKTLSAIAATLFALAIWQAIVTLTGLPKFILPGPALVAETWWQNRWLIAEHTWITAIEVL 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +   +++ +   + +         +QP      A P     PL+   + Y   +    
Sbjct: 61  IGLACGTVLGVITALQLANSRAARVLVQPMLVFTQALPVFALAPLLTLWLGYGLWSKVAM 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++ F     I  +   G    P  + ++A +   +       I +P   P   +G  
Sbjct: 121 AVLIIYF----PITSSFFDGLMRTPQGYLDLARTMQASPRSVLWNIRIPAALPSLASGMR 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A   A   +++ E          + GLG  +  +  +     +   +L +  F + L+ 
Sbjct: 177 LAAVYAPIGAVIGEWVG------SSQGLGYLMLLANGRAKTDLMFAAMLTLGVFSILLHL 230

Query: 572 FLWHPLYLYG 581
            +        
Sbjct: 231 AVRRATARMA 240


>gi|291299833|ref|YP_003511111.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290569053|gb|ADD42018.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 261

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 11/208 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  I      +      WL    T+      ++IA +  +  G+ I   P + +      
Sbjct: 41  VSRIAAALGTELGQSGFWLAVADTLAAWAQGLLIAVVAGVVCGVVIASVPGLRAATASTI 100

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           + L   P+      ++               LL+++ + W +L  VIAG +   +   + 
Sbjct: 101 EFLRPIPSVA----LIPLAILLLGTGIESTLLLVVYASFWQVLIQVIAGINDIDSVAADT 156

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A SF ++  R   ++ LP   PY +TG   A   A   ++ +E+       +   GLG  
Sbjct: 157 ARSFRLSAARRVWHLALPSALPYILTGVRLAASVALVLAVTAELV------IGAPGLGHE 210

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570
           I+ +    + P +   + +     +A+N
Sbjct: 211 ISVAKTSAAVPRMYALIAVTGILGVAVN 238



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 88/237 (37%), Gaps = 17/237 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +       I   +   L         + T       ++I+++   V   + A    L   
Sbjct: 36  RHLPPVSRIAAALGTELGQSGFWLAVADTLAAWAQGLLIAVVAGVVCGVVIASVPGLRAA 95

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
               ++ ++ IP       +V            G E + +  +  +  W +   +   + 
Sbjct: 96  TASTIEFLRPIP-------SVALIPLAILLLGTGIE-STLLLVVYASFWQVLIQVIAGIN 147

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           +I     + +RSFRLS  ++ W+L +P ++P ++  + ++ S      V +E++      
Sbjct: 148 DIDSVAADTARSFRLSAARRVWHLALPSALPYILTGVRLAASVALVLAVTAELV------ 201

Query: 220 IPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           I  PG+G  I++A        + A++     +   + L  +   R ++ W    R E
Sbjct: 202 IGAPGLGHEISVAKTSAAVPRMYALIAVTGILGVAVNLAARGAERRLLRWHPSIRQE 258


>gi|255657167|ref|ZP_05402576.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-23m63]
 gi|296451995|ref|ZP_06893710.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Clostridium difficile
           NAP08]
 gi|296879609|ref|ZP_06903588.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
 gi|296259186|gb|EFH06066.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, binding protein [Clostridium difficile
           NAP08]
 gi|296429412|gb|EFH15280.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
          Length = 511

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ + +IP +  L F + +               A+ A+    +  M  + Y  + N+ 
Sbjct: 58  TINFLYTIPSISMLGFLIPFSGIGNT--------TAVIALTIYALLPMVRNTYTGITNVD 109

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +++ E +R    + +Q  + + +P ++P ++  +          V+ +  +    + I  
Sbjct: 110 KNILEAARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGA 162

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I   I   + +  +   + +  +  ++D +L
Sbjct: 163 GGLGVAIYRGITTNNTVMTITGSILIALLALIFDFIL 199



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P+      ++      +    + L++  +      ++ N   G +    +  E
Sbjct: 59  INFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALL----PMVRNTYTGITNVDKNILE 114

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     T ++    I LP   P  ++G         N  I++   +     +   GLG 
Sbjct: 115 AARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGAGGLGV 167

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I       +    + G +++    L  +  L
Sbjct: 168 AIYRGITTNNTVMTITGSILIALLALIFDFIL 199


>gi|210621165|ref|ZP_03292507.1| hypothetical protein CLOHIR_00450 [Clostridium hiranonis DSM 13275]
 gi|210154902|gb|EEA85908.1| hypothetical protein CLOHIR_00450 [Clostridium hiranonis DSM 13275]
          Length = 235

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    + D   +I    IT+F  +   ++A +I + +GI + F   I   + P   +   
Sbjct: 27  IIEVFFTDYENLINHSIITIFESISGFMLAVLIALLMGILMDFVDIIRKCLYPLMLITQM 86

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V    +      L  +L++I    + IL + + G      D+  +  + +
Sbjct: 87  IPTITIAPLLVIWFGFG----ILPKTLMVILTCFFPILVSFVDGLENVDKDYLNLFKTMN 142

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +    + ++  P       +G   +   A  A+ V+E          T GLG Y+  S 
Sbjct: 143 ASKLDTFIHLKFPMSIEKLFSGLKISATYAVMAATVAEWLGG------TVGLGVYMVRSK 196

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
           +  +  +V    +++  F L  
Sbjct: 197 KAYALDKVFASTILIVIFSLIF 218



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 14/231 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++ +    ++   I +  +P     I     D  +L  ++  T    +S  ++++L   
Sbjct: 2   VIIAVWQFAVVQFDIPQYLLPAPTDIIEVFFTDYENLINHSIITIFESISGFMLAVLIAL 61

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +   L      +   L P++ I Q IP +      V++F      K +   L   F    
Sbjct: 62  LMGILMDFVDIIRKCLYPLMLITQMIPTITIAPLLVIWFGFGILPKTLMVILTCFF---- 117

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +  S    L N+ +D   + ++   S    F +L  P S+  L   + +S +   
Sbjct: 118 ----PILVSFVDGLENVDKDYLNLFKTMNASKLDTFIHLKFPMSIEKLFSGLKISATYAV 173

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                +E +          G+G Y+  + K   L  +  + + ++    ++
Sbjct: 174 MAATVAEWLGG------TVGLGVYMVRSKKAYALDKVFASTILIVIFSLIF 218


>gi|21284100|ref|NP_647188.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49487230|ref|YP_044451.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|282917801|ref|ZP_06325551.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283767532|ref|ZP_06340447.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|297209732|ref|ZP_06926128.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300910744|ref|ZP_07128194.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|21205543|dbj|BAB96236.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49245673|emb|CAG44152.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|282318086|gb|EFB48446.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283461411|gb|EFC08495.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|296885405|gb|EFH24342.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|298695715|gb|ADI98937.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300887724|gb|EFK82919.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 211

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGVDALL 195



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|295402360|ref|ZP_06812315.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
 gi|294975633|gb|EFG51256.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus thermoglucosidasius C56-YS93]
          Length = 269

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+    L  HSL  +   T L  +   +I  +    +  L     RL   L P
Sbjct: 56  SSPSAIWDLFVQKLADHSLVTHTFVTLLETMLGFIIGTVAGACFGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIIAMGVIISVIITTIV--------VYSAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ANYLKVLKTFGATRYQCFKEAVLPSSFPTIISTLKVNVGLSWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++L +  +  +  Q +
Sbjct: 222 LGLGYMIIYGFQVFNFTLVLMSLLVIALLSTIMYQAV 258



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 86/257 (33%), Gaps = 20/257 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           IR    +        +R+     +  F     +    +       +   +   +  +   
Sbjct: 8   IRSFHQQYIASRKKEKRLIRFFQLILFVTFFLLWEAASRYHWVDPLLFSSPSAIWDLFVQ 67

Query: 383 ----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                       +T+   ++  II ++     G  + + P ++  + P+  +  A P   
Sbjct: 68  KLADHSLVTHTFVTLLETMLGFIIGTVAGACFGALLWWFPRLAKTLDPYLVVFNAMPKVA 127

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+++  +     +    +  + +  +       V +       ++ +V  +F  T ++
Sbjct: 128 LGPILIVALGPGFTS----IIAMGVIISVIITTIVVYSAFQEVDANYLKVLKTFGATRYQ 183

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            ++  +LP  FP  ++      G +W   I  E        +   GLG  I    +  +F
Sbjct: 184 CFKEAVLPSSFPTIISTLKVNVGLSWVGVITGEFL------VSKLGLGYMIIYGFQVFNF 237

Query: 553 PEVVLGVLIMCCFVLAL 569
             V++ +L++      +
Sbjct: 238 TLVLMSLLVIALLSTIM 254


>gi|15893906|ref|NP_347255.1| ABC transporter permease [Clostridium acetobutylicum ATCC 824]
 gi|15023489|gb|AAK78595.1|AE007577_5 Uncharacterised permease, similar to ABC transporter (permease)
           [Clostridium acetobutylicum ATCC 824]
 gi|325508033|gb|ADZ19669.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 264

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT F  VV  ++++I+   + I + +    S  + P+  +L + P     P+++
Sbjct: 69  LFTHIGITCFETVVGFLLSTILGTFIAILLWWSDFASKVLDPYLVVLNSLPKIALAPIII 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     N    + ++ +  +    +  V+       ++  ++  +F    ++  +++I
Sbjct: 129 FWMG----NGIKAIIVITVLISIVVTIITVLNSFKEVEDEKIKLMKTFGANKFQILKHLI 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   P  ++      G +W   I+ E        +   GLG  I    +      V++ 
Sbjct: 185 IPSSIPTLMSALKINVGLSWVGVIMGEFL------VAKEGLGFLIVYGGQISELDMVMMS 238

Query: 559 VLIMCCFVLAL 569
           ++I+      +
Sbjct: 239 IIILSILAYLM 249



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 85/214 (39%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  ++  +       +L  +   T    +   ++S +     A L   S     VL 
Sbjct: 50  TSTPSRMLQSLIKIYGEGALFTHIGITCFETVVGFLLSTILGTFIAILLWWSDFASKVLD 109

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ S+P +      + +  N     ++   L +I     + +         S   +
Sbjct: 110 PYLVVLNSLPKIALAPIIIFWMGNGIKAIIVITVLISIVVTIITVL--------NSFKEV 161

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  ++ ++F  + +Q   +L +P S+P L+  + +++   W  V+  E +V  +    
Sbjct: 162 EDEKIKLMKTFGANKFQILKHLIIPSSIPTLMSALKINVGLSWVGVIMGEFLVAKE---- 217

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +  +L  ++ +++ +  + +L 
Sbjct: 218 --GLGFLIVYGGQISELDMVMMSIIILSILAYLM 249


>gi|306821657|ref|ZP_07455255.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550402|gb|EFM38395.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 212

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 79/195 (40%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +         A+  RL  +++   +++Q++P L  ++  +++   
Sbjct: 21  FRHFLISIYGVIFASIVAIPIGFFIARRYRLSGIVISTANVIQTVPSLAMISILMIFMGL 80

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I A+F   +  +  + Y  + ++  +L +V++S  +S  Q    + +
Sbjct: 81  GV--------NTVIMAVFLYSLLPIIKNTYTGVKSVDENLIDVAKSMGMSKKQVIMKIEL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P SM  ++  +          +V +  +    T I   G+G  I   IK  +  AI+ A 
Sbjct: 133 PLSMSIIMAGIR-------NALVMAVGVTAIGTFIGAGGLGDIITRGIKVSNGSAIIMAG 185

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 186 ALPTALMAVISDFLL 200



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 11/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV+          +  +I ASI+ IP+G +I  R  +S  +   A ++   P+     ++
Sbjct: 15  YVLHQFFRHFLISIYGVIFASIVAIPIGFFIARRYRLSGIVISTANVIQTVPSLAMISIL 74

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G  +   +  +VA S  ++  +    I
Sbjct: 75  MIFMGLGVNT----VIMAVFLYSLLPIIKNTYTGVKSVDENLIDVAKSMGMSKKQVIMKI 130

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G         NA +++   +     +   GLG  I    +  +   +++
Sbjct: 131 ELPLSMSIIMAGIR-------NALVMAVGVTAIGTFIGAGGLGDIITRGIKVSNGSAIIM 183

Query: 558 GVLIMCCFVLALNRFLWH 575
              +    +  ++ FL  
Sbjct: 184 AGALPTALMAVISDFLLQ 201


>gi|298717391|ref|YP_003730033.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361580|gb|ADI78361.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 271

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+ +     D +   P       L    +  +  R+L+ + +S +        A   
Sbjct: 44  LLPGLSQMIAAIDRMAFTPDKRSGEYLLWADTWISLTRLLTGLALSSVIGLCIGIAAGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P + ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PMTRAALSPFMTVVSMIPPLALLPMLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +      IP +L   +++   + W     + +P  +  L+ ++ + +   W F++++E I
Sbjct: 156 LEHRAREIPAELFIKAQTLGANSWTVVLRVVLPQLLSRLITSLRLLLGSAWLFLISAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  I+  ++ +  + +L D  L
Sbjct: 216 S------ATAGLGYRIFLVRRYMAMDVIIPYVIWITLLAWLMDLAL 255



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R++  + ++S+I + +GI  G  P   + + PF  +++  P     P++       
Sbjct: 77  ISLTRLLTGLALSSVIGLCIGIAAGVFPMTRAALSPFMTVVSMIPPLALLPMLFIVFGLD 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      +L++ G    +  ++   A   P +    A +     W     ++LP +  
Sbjct: 137 ELSK----VMLIVIGITPMLARDLEHRAREIPAELFIKAQTLGANSWTVVLRVVLPQLLS 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T      G AW   I +E  S       T GLG  I       +   ++  V+ +  
Sbjct: 193 RLITSLRLLLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVIIPYVIWITL 246

Query: 565 FVLALNRFLWH 575
               ++  L  
Sbjct: 247 LAWLMDLALRQ 257


>gi|253734129|ref|ZP_04868294.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253727824|gb|EES96553.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|329730362|gb|EGG66752.1| choline transport system permease protein opuBB [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 211

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R+  +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRIANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGVDALL 195



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +     I++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRIANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|15925437|ref|NP_372971.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15928026|ref|NP_375559.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus subsp. aureus N315]
 gi|57652262|ref|YP_187251.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87162395|ref|YP_495027.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88196381|ref|YP_501204.1| amino acid ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268884|ref|YP_001247827.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|150394958|ref|YP_001317633.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|151222558|ref|YP_001333380.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156980762|ref|YP_001443021.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|161510646|ref|YP_001576305.1| glycine betaine/choline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221140793|ref|ZP_03565286.1| glycine betaine/choline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253314783|ref|ZP_04837996.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|253730125|ref|ZP_04864290.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter opuCB [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|255007222|ref|ZP_05145823.2| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257794787|ref|ZP_05643766.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258407467|ref|ZP_05680610.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|258422205|ref|ZP_05685117.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|258439597|ref|ZP_05690343.1| amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|258442846|ref|ZP_05691406.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A8115]
 gi|258446453|ref|ZP_05694608.1| amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|258450430|ref|ZP_05698522.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A6224]
 gi|258451247|ref|ZP_05699280.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A5948]
 gi|258455193|ref|ZP_05703153.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|262048849|ref|ZP_06021730.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus D30]
 gi|262051586|ref|ZP_06023807.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus 930918-3]
 gi|269204080|ref|YP_003283349.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893898|ref|ZP_06302130.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8117]
 gi|282920436|ref|ZP_06328159.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9765]
 gi|282928484|ref|ZP_06336085.1| osmoprotectant transport system permease [Staphylococcus aureus
           A10102]
 gi|284025468|ref|ZP_06379866.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus 132]
 gi|294848997|ref|ZP_06789742.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9754]
 gi|295405142|ref|ZP_06814955.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8819]
 gi|296275607|ref|ZP_06858114.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297244197|ref|ZP_06928087.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8796]
 gi|304379647|ref|ZP_07362380.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|13702397|dbj|BAB43538.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus subsp. aureus N315]
 gi|14248221|dbj|BAB58609.1| probable glycine betaine/carnitine/choline ABC transporter
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|57286448|gb|AAW38542.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87128369|gb|ABD22883.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87203939|gb|ABD31749.1| amino acid ABC transporter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147741953|gb|ABQ50251.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|149947410|gb|ABR53346.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|150375358|dbj|BAF68618.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156722897|dbj|BAF79314.1| probable glycine betaine/carnitine/choline ABC transporter
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369455|gb|ABX30426.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253726153|gb|EES94882.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter opuCB [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257788759|gb|EEV27099.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257840979|gb|EEV65430.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|257841636|gb|EEV66073.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|257847373|gb|EEV71375.1| amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|257851967|gb|EEV75901.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A8115]
 gi|257854521|gb|EEV77469.1| amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|257856522|gb|EEV79431.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A6224]
 gi|257861039|gb|EEV83854.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A5948]
 gi|257862404|gb|EEV85172.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|259160570|gb|EEW45593.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus 930918-3]
 gi|259163107|gb|EEW47668.1| probable glycine betaine/carnitine/choline ABC transporter opuCB
           [Staphylococcus aureus D30]
 gi|262076370|gb|ACY12343.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269942029|emb|CBI50441.1| putative glycine betaine/carnitine/cholinetransport system permease
           protein [Staphylococcus aureus subsp. aureus TW20]
 gi|282589879|gb|EFB94963.1| osmoprotectant transport system permease [Staphylococcus aureus
           A10102]
 gi|282594382|gb|EFB99368.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9765]
 gi|282763956|gb|EFC04084.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8117]
 gi|285818108|gb|ADC38595.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCB [Staphylococcus aureus 04-02981]
 gi|294824376|gb|EFG40800.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9754]
 gi|294970087|gb|EFG46105.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8819]
 gi|297178975|gb|EFH38220.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8796]
 gi|302752317|gb|ADL66494.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304341823|gb|EFM07729.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312830792|emb|CBX35634.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130916|gb|EFT86901.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|315197343|gb|EFU27680.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320139154|gb|EFW31036.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142592|gb|EFW34400.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329315133|gb|AEB89546.1| Binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus T0131]
 gi|329723743|gb|EGG60272.1| choline transport system permease protein opuBB [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329726680|gb|EGG63141.1| choline transport system permease protein opuBB [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 211

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIVLTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGVDALL 195



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ +   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIVLTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|169334753|ref|ZP_02861946.1| hypothetical protein ANASTE_01159 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257491|gb|EDS71457.1| hypothetical protein ANASTE_01159 [Anaerofustis stercorihominis DSM
           17244]
          Length = 269

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 95/244 (38%), Gaps = 16/244 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           +   +L   LV+  +   L  I +  T+ P  + + +   +  HSL  +   TT   ++ 
Sbjct: 29  SRIGILVLFLVLWEMAARLGWINQFITSSPSRVFETIVDLIKTHSLYNHLFVTTFETVAG 88

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             +  +F  + A +   S RL  +L P L ++ ++P +      +V+        +I   
Sbjct: 89  FTLGTVFGTIIAMMLWWSERLAKILDPYLVVLNALPKVALGPVIIVWAGAGMGSILIMTL 148

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             +I A            +Y        +   + ++F  S  Q F     P S+  ++  
Sbjct: 149 AISIVA--------TIIGVYSGFMQASEEKIILLKTFNASKMQIFTKAVFPSSIKNIINA 200

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +++   W  V+      +G+ ++   G+G  I    +  +L  ++  ++ +  V  L 
Sbjct: 201 LKINVGLSWVGVI------MGEFLVSKAGLGYLIVYGSQVFNLDLVMAGVVILSVVAGLM 254

Query: 256 DQLL 259
             L+
Sbjct: 255 YFLV 258



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 66/186 (35%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T F  V    + ++    + + + +   ++  + P+  +L A P     P+++     
Sbjct: 79  FVTTFETVAGFTLGTVFGTIIAMMLWWSERLAKILDPYLVVLNALPKVALGPVIIVWAGA 138

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  +    + I  T    +  V +G      +   +  +F+ +  + +   + P   
Sbjct: 139 GMGSILIMTLAISIVAT----IIGVYSGFMQASEEKIILLKTFNASKMQIFTKAVFPSSI 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +       G +W   I+ E        +   GLG  I   ++  +   V+ GV+I+ 
Sbjct: 195 KNIINALKINVGLSWVGVIMGEFL------VSKAGLGYLIVYGSQVFNLDLVMAGVVILS 248

Query: 564 CFVLAL 569
                +
Sbjct: 249 VVAGLM 254


>gi|301052372|ref|YP_003790583.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374541|gb|ADK03445.1| ABC transporter, permease [Bacillus cereus biovar anthracis str.
           CI]
          Length = 250

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTMWEVGARIVDEMYILPSPSAIVMKMWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|157693452|ref|YP_001487914.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
 gi|157682210|gb|ABV63354.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus SAFR-032]
          Length = 264

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT+F  V+  ++ +   I +   + +   +++ + P+  +L A P     P+
Sbjct: 68  GSLMNHMSITLFETVLGFLLGTFCGILLAAALWWSTRLANVLDPYLVILNAMPKVALAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +    ++     +++ +  T       +         ++ +V  +F       +R 
Sbjct: 128 LIVALGPGMISIVAMGAIISVIITT----IVIYTAFQEVDENYLKVMKTFGARKSVVFRE 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++      G +W   IV E        + + GLG  I    +  +F  V 
Sbjct: 184 VILPASIPTMISAIKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLVF 237

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           L + I+  F   + + +      +  R  
Sbjct: 238 LSLFIIAVFATIMYQLV-----EWLERRF 261



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +    +   SL  + S T    +   ++      + A     S RL  VL P
Sbjct: 52  SAPSAVCQLFVQKIQDGSLMNHMSITLFETVLGFLLGTFCGILLAAALWWSTRLANVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V      PG +    + AI ++  +     T  +Y +   + 
Sbjct: 112 YLVILNAMPKVALAPILIVALG---PGMISIVAMGAIISVIIT-----TIVIYTAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F       F  + +P S+P ++  + +++   W  V+  E +V        
Sbjct: 164 ENYLKVMKTFGARKSVVFREVILPASIPTMISAIKVNVGLSWVGVIVGEFLVSSK----- 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +  ++  +     +  QL+
Sbjct: 219 -GLGYMIIYGFQVFNFTLVFLSLFIIAVFATIMYQLV 254


>gi|258542372|ref|YP_003187805.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256633450|dbj|BAH99425.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636509|dbj|BAI02478.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639562|dbj|BAI05524.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642618|dbj|BAI08573.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645673|dbj|BAI11621.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648726|dbj|BAI14667.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256651779|dbj|BAI17713.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654770|dbj|BAI20697.1| nitrate/sulfonate/bicarbonate transporter permease protein
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 255

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 74/202 (36%), Gaps = 6/202 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    + ++  +      T+   +  + ++ ++ + V   +   P I   + P+  L+  
Sbjct: 42  IARSLFSNIDTLGHALYSTLTVTLAALCVSVVLGVLVAFVLVQHPLIERSLMPYVVLMQV 101

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++  V    L     L + +     + I+ N + G  +     +       
Sbjct: 102 TPVVALAPLIIILVKTTLL----ALVVCVTLIAIFPIISNTLQGLKSVDPGLEAFFRMHK 157

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    + +P   P ++ G   + G A   ++V+E  +       + GL   I ++ 
Sbjct: 158 ASRLKTLLRLQIPSALPMFMAGLQISSGLALVGAVVAEFVAG--TGGNSAGLAYEILQAG 215

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +   P +   + ++    LAL
Sbjct: 216 FQMDIPRMFAALFMITLTGLAL 237



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 13/242 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           IF  +   + F+L+   I    H        P DI   +   +D  +L      T    L
Sbjct: 8   IFAPLAVGILFLLLWQGICYFWHIPPYLMPAPSDIARSLFSNID--TLGHALYSTLTVTL 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+ +S++   + A +  +   +   L+P + +MQ  P++      ++         V+ 
Sbjct: 66  AALCVSVVLGVLVAFVLVQHPLIERSLMPYVVLMQVTPVVALAPLIIILVKTTLLALVVC 125

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L AIF I +        +  Q L ++   LE   R  + S  +    L +P ++P  +
Sbjct: 126 VTLIAIFPIIS--------NTLQGLKSVDPGLEAFFRMHKASRLKTLLRLQIPSALPMFM 177

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S        V +E +          G+   I  A  + D+  +  A+  +     
Sbjct: 178 AGLQISSGLALVGAVVAEFVAGTGGNSA--GLAYEILQAGFQMDIPRMFAALFMITLTGL 235

Query: 254 LY 255
             
Sbjct: 236 AL 237


>gi|312109849|ref|YP_003988165.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y4.1MC1]
 gi|311214950|gb|ADP73554.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y4.1MC1]
          Length = 269

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+    L  HSL  +   T L  +   +I  +    +  L     RL   L P
Sbjct: 56  SSPSAIWDLFVQKLADHSLVTHTFVTLLETMLGFIIGTIAGACFGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIIAMGVIISVIITTIV--------VYSAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 ANYLKVLKTFGATRYQCFKEAVLPSSFPTIISTLKVNVGLSWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   +L ++L +  +  +  Q +
Sbjct: 222 LGLGYMIIYGFQVFNFTLVLMSLLVIALLSTIMYQAV 258



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 86/257 (33%), Gaps = 20/257 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           IR    +        +R+     +  F     +    +       +   +   +  +   
Sbjct: 8   IRSFHQQYIASRKKEKRLIRFFQLILFVTFFLLWEAASRYHWVDPLLFSSPSAIWDLFVQ 67

Query: 383 ----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                       +T+   ++  II +I     G  + + P ++  + P+  +  A P   
Sbjct: 68  KLADHSLVTHTFVTLLETMLGFIIGTIAGACFGALLWWFPRLAKTLDPYLVVFNAMPKVA 127

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+++  +     +    +  + +  +       V +       ++ +V  +F  T ++
Sbjct: 128 LGPILIVALGPGFTS----IIAMGVIISVIITTIVVYSAFQEVDANYLKVLKTFGATRYQ 183

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            ++  +LP  FP  ++      G +W   I  E        +   GLG  I    +  +F
Sbjct: 184 CFKEAVLPSSFPTIISTLKVNVGLSWVGVITGEFL------VSKLGLGYMIIYGFQVFNF 237

Query: 553 PEVVLGVLIMCCFVLAL 569
             V++ +L++      +
Sbjct: 238 TLVLMSLLVIALLSTIM 254


>gi|242237496|ref|YP_002985677.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242129553|gb|ACS83855.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 292

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               +L  +   T    L+   + L      A     SR L   L+P +   Q++P+L  
Sbjct: 84  TSPRNLLLHTWVTASAALTGFFMGLALGLGLAVCIVHSRTLDKALLPWIVASQTVPVLAI 143

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   +L    ++     A++  F    + +T +  Q L    +   E+  ++  S
Sbjct: 144 APIVLVILGSLGITGMLPKATIAMYLCF----FPVTIATVQGLRAPQKLEMELVHTYAAS 199

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               FW + +P S+P L     ++++ G    + +E+           G+GS +      
Sbjct: 200 RIDTFWLVRLPSSLPYLFPAFRVAIASGLVGTMVAELPTGAQA-----GLGSRLLTGSYY 254

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            + + I  A++    +      L+
Sbjct: 255 GNTVQIWSALVMASLLGLGLTALV 278



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 67/195 (34%), Gaps = 5/195 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T    +    +   + + + + I     +   + P+       P     P+V+
Sbjct: 89  LLLHTWVTASAALTGFFMGLALGLGLAVCIVHSRTLDKALLPWIVASQTVPVLAIAPIVL 148

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    +   L  + + ++   + +    + G  A      E+  ++  +    +  + 
Sbjct: 149 VILGSLGITGMLPKATIAMYLCFFPVTIATVQGLRAPQKLEMELVHTYAASRIDTFWLVR 208

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY       A       ++V+E+ +         GLG+ +   +  G+  ++   
Sbjct: 209 LPSSLPYLFPAFRVAIASGLVGTMVAELPTGAQ-----AGLGSRLLTGSYYGNTVQIWSA 263

Query: 559 VLIMCCFVLALNRFL 573
           +++     L L   +
Sbjct: 264 LVMASLLGLGLTALV 278


>gi|138896393|ref|YP_001126846.1| ABC transporter permease [Geobacillus thermodenitrificans NG80-2]
 gi|134267906|gb|ABO68101.1| ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2]
          Length = 269

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 14/227 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I  +    +  +SL  +   T    +   +I  +   +   L     RL   L P
Sbjct: 56  SSPSAIGKLFIEKIGDYSLLTHTWATLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + AI              +Y S   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVIAIIITTIV--------VYASFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V R+F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 SNYLKVLRTFGATRYQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  I    +  +   +L ++L +  +  L  QL+      WSN+
Sbjct: 222 QGLGYLIIYGFQVFNFTLVLMSLLIVAVLSTLMYQLVAMIEKKWSNR 268



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 93/263 (35%), Gaps = 21/263 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             ++K  R + V +      F  +         +D   F     +      +   Y +  
Sbjct: 17  AALRKERRVIRVWQVALLIAFFAVWEAASHFRWVDPLLFSSPSAIGKLFIEKIGDYSLLT 76

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T+            T+F  ++  II ++    +G  + + P ++  + P+  +  A P 
Sbjct: 77  HTWA-----------TLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDPYLVVFNAMPK 125

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+++  +     +    +  + +          V A      +++ +V  +F  T 
Sbjct: 126 VALGPILIVALGPGFTS----IIAMGVVIAIIITTIVVYASFQEVDSNYLKVLRTFGATR 181

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++ ++  +LP  FP  ++      G AW   I  E        +   GLG  I    +  
Sbjct: 182 YQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFL------VSKQGLGYLIIYGFQVF 235

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           +F  V++ +LI+      + + +
Sbjct: 236 NFTLVLMSLLIVAVLSTLMYQLV 258


>gi|240138387|ref|YP_002962859.1| ABC transporter permease component (subunit B) [Methylobacterium
           extorquens AM1]
 gi|240008356|gb|ACS39582.1| ABC transporter permease component (subunit B) [Methylobacterium
           extorquens AM1]
          Length = 244

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +   +       SL      T  R+  + VI++    +      +SR    +
Sbjct: 27  RTLPAPSAVFAFMLREAQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRL 86

Query: 100 LV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L  P+L ++ + P L       V+            E AAI A+  +++ N+   M +  
Sbjct: 87  LDTPLLVVLNT-PALVITVLAYVWLGL--------TETAAIVAVALNKLPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   LEE++ ++R        ++ +P   P +V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLEEMATTYRFDRRTWIAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I       D+ A++   L  + V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVMLALDSLLLQPLDAHVRRWR 244



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                + +   +T+ RV V  +IA  + + +GI +G        +     ++   PA V 
Sbjct: 43  AQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            + +       +   +  GA       +E+A+++      W
Sbjct: 103 TVLAYVWLGLTET----AAIVAVALNKLPNVAVIMREGARGLDPGLEEMATTYRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LP + P+ V  A +    AW   +V E+        R  G+G  I          
Sbjct: 159 IAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG------RPNGVGFAINYYFTLFDVT 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            V+   L+    +LAL+  L  PL  +  R
Sbjct: 213 AVIGYSLVFMSVMLALDSLLLQPLDAHVRR 242


>gi|261404472|ref|YP_003240713.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261280935|gb|ACX62906.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 255

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 16/232 (6%)

Query: 15  IFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIV-DIVPITLDVHSLPQYASRTTLRM 72
           ++P    +L F+ V    +++          P  I  +          L Q+   T    
Sbjct: 9   VWPPAAAVLFFLTVWQAAVSVFDIEPYILPAPTAIGHEAATGATGASGLFQHTLATLQLT 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   +I      V +        L   L P+L + Q++P +      +++F      KVI
Sbjct: 69  LVGFMIGTAIGLVISLALHLVPFLKTALYPLLILSQNVPTIALAPLLMIWFGFGMLPKVI 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +  + +          L    R +    +    + WQ F  L +P ++P +
Sbjct: 129 VITLVCFFPVAVAAL--------DGLARTDRTMMNYMQMAGATSWQIFTKLELPHALPSI 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
              + ++ +      V  E I          GIG Y+ L         +  A
Sbjct: 181 FSGIRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 226



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 57/180 (31%), Gaps = 10/180 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+   +V  +I + I + + + +   P + + + P   L    P     PL++
Sbjct: 57  LFQHTLATLQLTLVGFMIGTAIGLVISLALHLVPFLKTALYPLLILSQNVPTIALAPLLM 116

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      L   +++     + +    + G +               T W+ +  + 
Sbjct: 117 IWFGFG----MLPKVIVITLVCFFPVAVAALDGLARTDRTMMNYMQMAGATSWQIFTKLE 172

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P   +G   A   +   +++ E            G+G Y+           V + 
Sbjct: 173 LPHALPSIFSGIRIAATYSVMGAVIGEWIG------SDRGIGYYMMLQKSGYRTDRVFVA 226


>gi|219685948|ref|ZP_03540745.1| phosphate ABC transporter, permease protein [Borrelia garinii
           Far04]
 gi|219672513|gb|EED29555.1| phosphate ABC transporter, permease protein [Borrelia garinii
           Far04]
          Length = 514

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIIKIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIIKIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|218901922|ref|YP_002449756.1| putative ABC transporter, permease protein [Bacillus cereus AH820]
 gi|218539224|gb|ACK91622.1| putative ABC transporter, permease protein [Bacillus cereus AH820]
          Length = 250

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTMWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|220928322|ref|YP_002505231.1| binding-protein-dependent transporters inner membrane component
           [Clostridium cellulolyticum H10]
 gi|219998650|gb|ACL75251.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulolyticum H10]
          Length = 274

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT +  VV  +  +++   + + + +   +S   +P+  +L + P     P+
Sbjct: 76  GQLFHHIGITCWETVVGFVAGTVLGTLIAVVLWWSEFLSKVFEPYLVILNSLPKIALGPI 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +        +  +    + I  +    +  V+ G  A   +  ++  +F  + ++ +  
Sbjct: 136 FIVWFGAGTTSIIIIALAISIVVS----ILEVLNGFMATDEEQVKLVKTFGASRFQVFTK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ P   P  +       G +W   IV E        +  +GLG  I    +      V+
Sbjct: 192 VVFPANLPVIINSLKVNVGLSWVGVIVGEFL------VSKSGLGYLIVYGGQVFKLDLVM 245

Query: 557 LGVLIMC 563
             V+I+C
Sbjct: 246 ASVIILC 252



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  I + +        L  +   T    +   V   +   + A +   S  L  V  
Sbjct: 59  TSQPSRIANTIINLYSEGQLFHHIGITCWETVVGFVAGTVLGTLIAVVLWWSEFLSKVFE 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L I+ S+P +      +V+F       +I A   +I              +       
Sbjct: 119 PYLVILNSLPKIALGPIFIVWFGAGTTSIIIIALAISIVVSI--------LEVLNGFMAT 170

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  ++ ++F  S +Q F  +  P ++P ++ ++ +++   W  V+  E +V       
Sbjct: 171 DEEQVKLVKTFGASRFQVFTKVVFPANLPVIINSLKVNVGLSWVGVIVGEFLVSKS---- 226

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ +++ +     +  Q +
Sbjct: 227 --GLGYLIVYGGQVFKLDLVMASVIILCFAAGIMYQAV 262


>gi|42779874|ref|NP_977121.1| ABC transporter, permease protein, putative [Bacillus cereus ATCC
           10987]
 gi|42735791|gb|AAS39729.1| ABC transporter, permease protein, putative [Bacillus cereus ATCC
           10987]
          Length = 250

 Score = 79.6 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VAISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAILFVILI 236



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +  L+  L+
Sbjct: 221 PIVLLSLLAILFVILI 236


>gi|228899099|ref|ZP_04063371.1| ABC transporter, permease protein [Bacillus thuringiensis IBL 4222]
 gi|228919309|ref|ZP_04082679.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228950933|ref|ZP_04113054.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228956840|ref|ZP_04118625.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228963487|ref|ZP_04124644.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|229042293|ref|ZP_04190045.1| ABC transporter, permease protein [Bacillus cereus AH676]
 gi|229068130|ref|ZP_04201437.1| ABC transporter, permease protein [Bacillus cereus F65185]
 gi|229077734|ref|ZP_04210364.1| ABC transporter, permease protein [Bacillus cereus Rock4-2]
 gi|229095094|ref|ZP_04226090.1| ABC transporter, permease protein [Bacillus cereus Rock3-29]
 gi|229101196|ref|ZP_04231962.1| ABC transporter, permease protein [Bacillus cereus Rock3-28]
 gi|229108047|ref|ZP_04237673.1| ABC transporter, permease protein [Bacillus cereus Rock1-15]
 gi|229114048|ref|ZP_04243474.1| ABC transporter, permease protein [Bacillus cereus Rock1-3]
 gi|229143167|ref|ZP_04271599.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST24]
 gi|229148778|ref|ZP_04277028.1| ABC transporter, permease protein [Bacillus cereus m1550]
 gi|229176967|ref|ZP_04304362.1| ABC transporter, permease protein [Bacillus cereus 172560W]
 gi|228606442|gb|EEK63868.1| ABC transporter, permease protein [Bacillus cereus 172560W]
 gi|228634786|gb|EEK91365.1| ABC transporter, permease protein [Bacillus cereus m1550]
 gi|228640248|gb|EEK96646.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST24]
 gi|228669507|gb|EEL24923.1| ABC transporter, permease protein [Bacillus cereus Rock1-3]
 gi|228675447|gb|EEL30665.1| ABC transporter, permease protein [Bacillus cereus Rock1-15]
 gi|228682324|gb|EEL36435.1| ABC transporter, permease protein [Bacillus cereus Rock3-28]
 gi|228688424|gb|EEL42306.1| ABC transporter, permease protein [Bacillus cereus Rock3-29]
 gi|228705675|gb|EEL58031.1| ABC transporter, permease protein [Bacillus cereus Rock4-2]
 gi|228714944|gb|EEL66812.1| ABC transporter, permease protein [Bacillus cereus F65185]
 gi|228727084|gb|EEL78289.1| ABC transporter, permease protein [Bacillus cereus AH676]
 gi|228796181|gb|EEM43632.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228802881|gb|EEM49714.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228808660|gb|EEM55158.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228840416|gb|EEM85687.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228860540|gb|EEN04928.1| ABC transporter, permease protein [Bacillus thuringiensis IBL 4222]
          Length = 207

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|148257216|ref|YP_001241801.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409389|gb|ABQ37895.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 245

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 97/241 (40%), Gaps = 14/241 (5%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I   + G  +   P  ++ +        +L  +   T  R+  A  +S+           
Sbjct: 16  IAAAVAGSVKLPPPSAVLAVAIAEAQSGALFLHLGATLARVTLAFTLSMAIGSALGYWMG 75

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR    +  P L ++ ++P L  +    ++            E+AAI AI  +++    
Sbjct: 76  RSRLANRLGDPWLILLLNLPALVVIVLAYIWAGL--------TEVAAIAAIAINKLPTAV 127

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++ +    +   L+E+++ F     +   ++ +P   P +       +S  W  V+ +E
Sbjct: 128 VTLREGARALDPALDEMAKVFAFPRGRILRHVLLPQLAPYIAAAARSGLSLVWKIVLVAE 187

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           ++          GIG  I +A +  D+  +L   L+   V+ + + ++ +P    ++++R
Sbjct: 188 LLG------RPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEAVIVQPFERRASRWR 241

Query: 272 L 272
           L
Sbjct: 242 L 242



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 10/236 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W+                 +           +      T+ RV +   ++  I   +G W
Sbjct: 14  WWIAAAVAGSVKLPPPSAVLAVAIAEAQSGALFLHLGATLARVTLAFTLSMAIGSALGYW 73

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G     +    P+  LL   PA V   L         +     +++  +       +  
Sbjct: 74  MGRSRLANRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAINKLPTA----VVT 129

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  GA A      E+A  F     R  R+++LP + PY    A +     W   +V+E+ 
Sbjct: 130 LREGARALDPALDEMAKVFAFPRGRILRHVLLPQLAPYIAAAARSGLSLVWKIVLVAELL 189

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
                  R  G+G  I  + +    P ++   L     VL +   +  P     +R
Sbjct: 190 G------RPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEAVIVQPFERRASR 239


>gi|325108444|ref|YP_004269512.1| binding-protein-dependent transporters inner membrane component
           [Planctomyces brasiliensis DSM 5305]
 gi|324968712|gb|ADY59490.1| binding-protein-dependent transport systems inner membrane
           component [Planctomyces brasiliensis DSM 5305]
          Length = 258

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 74/202 (36%), Gaps = 6/202 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V          +      T+F   V  +++      + +       +     P+A  L  
Sbjct: 45  VAKVLLGRSQELFSATVHTLFNAGVGFLLSLACGTVIAVMFAEFRWLRISCYPYAIFLHT 104

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+++   Y   +    + ++    + + ++     G  +   + KE+ + +H
Sbjct: 105 VPIVAISPLIITWFGYGSQS----VIVITFIVSLFPVITGATNGLLSASTELKELFALYH 160

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+    +  P   P  VTGA TA G A   +IV E   +        GLG YI  + 
Sbjct: 161 ASRWQTLLKLKFPAAVPQLVTGAQTASGMAVVGAIVGEF--FAGYDSGAYGLGYYIFAAQ 218

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +     ++  VL+     +AL
Sbjct: 219 GQFRTDVLLAAVLLSTLLGIAL 240



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      T        ++SL    V A + A+ R L +   P    + ++PI+     
Sbjct: 54  QELFSATVHTLFNAGVGFLLSLACGTVIAVMFAEFRWLRISCYPYAIFLHTVPIVAISPL 113

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +F             + I   F   ++ +       L +   +L+E+   +  S WQ
Sbjct: 114 IITWFGYG--------SQSVIVITFIVSLFPVITGATNGLLSASTELKELFALYHASRWQ 165

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               L  P ++P LV     +        +  E            G+G YI  A  +   
Sbjct: 166 TLLKLKFPAAVPQLVTGAQTASGMAVVGAIVGEFFA--GYDSGAYGLGYYIFAAQGQFRT 223

Query: 239 LAILYAMLTMLGVIFLY 255
             +L A+L    +    
Sbjct: 224 DVLLAAVLLSTLLGIAL 240


>gi|302334073|gb|ADL24266.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 211

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++++++       L +K++R   +++ +  ++Q+IP L  L  
Sbjct: 10  GQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D 
Sbjct: 122 LMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           L I+ A + +  +    D LL
Sbjct: 175 LMIVTATVLVTALALGIDALL 195



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++    ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGIDALL 195


>gi|284043890|ref|YP_003394230.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948111|gb|ADB50855.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 255

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 12/253 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           + +        L        +    W       A+  +  +   +         L   W 
Sbjct: 1   MNWRAAPPDWALRVLAAFLVVGTWAWLSTRVSPALLPSPGATWDVGWEMVTDGTLGTAW- 59

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +  +++  ++IAS + + + I +G+   +     P   +L   P   F PL+   + 
Sbjct: 60  -KESAVQILFGMVIASTLGVSLAIVVGWYQAVDRVTSPVVTILFLTPRIAFVPLLAIWLG 118

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y     +L    L++  + + I   V  G  A  + + E++ S+ I      R +I P +
Sbjct: 119 Y----DDLAKIALIVLFSFFEIFLTVKRGVQAVEDSYIELSRSYSIPDRDLLRKVIFPAV 174

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY   G       +    +++          +  G+G  I ++       E+++ V  +
Sbjct: 175 TPYVAAGLRLGLLASLVGVVLA------GFFFQVNGIGGLIYQAGSTFRTAELLVAVGSL 228

Query: 563 CCFVLALNRFLWH 575
               L ++  L  
Sbjct: 229 SVVALTISTGLRR 241



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 88/252 (34%), Gaps = 18/252 (7%)

Query: 14  RIFPNIFDL--LAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTT 69
           R  P  + L  LA  LV+G    L   +    +P      D+    +   +L      + 
Sbjct: 4   RAAPPDWALRVLAAFLVVGTWAWLSTRVSPALLPSPGATWDVGWEMVTDGTLGTAWKESA 63

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +++L  MVI+       A +    + +  V  P++ I+   P + F+    ++       
Sbjct: 64  VQILFGMVIASTLGVSLAIVVGWYQAVDRVTSPVVTILFLTPRIAFVPLLAIWLGYD--- 120

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                +LA I  I     + +  ++ + +  +     E+SRS+ +        +  P   
Sbjct: 121 -----DLAKIALIVLFSFFEIFLTVKRGVQAVEDSYIELSRSYSIPDRDLLRKVIFPAVT 175

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + + +      VV +           + GIG  I  A        +L A+ ++ 
Sbjct: 176 PYVAAGLRLGLLASLVGVVLAGFF------FQVNGIGGLIYQAGSTFRTAELLVAVGSLS 229

Query: 250 GVIFLYDQLLFR 261
            V       L R
Sbjct: 230 VVALTISTGLRR 241


>gi|260438039|ref|ZP_05791855.1| ABC transporter, permease protein, cysTW family [Butyrivibrio
           crossotus DSM 2876]
 gi|292809518|gb|EFF68723.1| ABC transporter, permease protein, cysTW family [Butyrivibrio
           crossotus DSM 2876]
          Length = 254

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 106/261 (40%), Gaps = 11/261 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           + R+       ++ ++++  II+ ++        P   V+ +   L   +  +  S +  
Sbjct: 1   MKRKTLYTFISIIIWLVLWQIISAVISSPVFLPSPLQTVNALFSLLKTSAYYKSLSYSLF 60

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +       L    V A  A+ +  L  V+   + I++SIP+  F+   +++  + +   
Sbjct: 61  NISIGFFTGLFAGVVLAVAASVNTFLQSVIEVPVKIIRSIPVASFIILALLWVDSAH--- 117

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                  + F    + +  +  + +  + +    ++E++  F  S ++K  Y+ +P++ P
Sbjct: 118 ------LSTFIAAITIMPVIYTNTFSGIAHTDSQMKEMAGVFHFSPFKKLVYIYMPYAAP 171

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  + +S    W   +A+E+I +    I      S I L         I   +L+++ 
Sbjct: 172 HFLSGVKLSCGFAWKSGIAAEIIGLVRHSIGNNIYKSKIYLETDNLFAWTISLIVLSIIF 231

Query: 251 --VIFLYDQLLFRPMIVWSNK 269
             ++ L   L+F+     ++K
Sbjct: 232 EKIVLLILNLIFKRTGSINDK 252



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 77/193 (39%), Gaps = 8/193 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++F + +         + + +       + S I+   +++ + P   F  L +  V   H
Sbjct: 58  SLFNISIGFFTGLFAGVVLAVAASVNTFLQSVIEVPVKIIRSIPVASFIILALLWVDSAH 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+  +    +M       I  N  +G +   +  KE+A  FH + ++   YI +P   P+
Sbjct: 118 LSTFIAAITIMPV-----IYTNTFSGIAHTDSQMKEMAGVFHFSPFKKLVYIYMPYAAPH 172

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIM 562
           +++G   +CG AW + I +E+       +      + I   T+     +   +VL ++  
Sbjct: 173 FLSGVKLSCGFAWKSGIAAEIIGLVRHSIGNNIYKSKIYLETDNLFAWTISLIVLSIIFE 232

Query: 563 CCFVLALNRFLWH 575
              +L LN     
Sbjct: 233 KIVLLILNLIFKR 245


>gi|325293739|ref|YP_004279603.1| nitrate ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325061592|gb|ADY65283.1| nitrate ABC transporter, membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 291

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 9/225 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +         +        SL  +A  T    L    I  +   + A     +R
Sbjct: 61  VLPAPHQIIAELWDTTVNKAITSKRSLVYHAGVTLSATLLGFAIGAVLGILLAVAIIHNR 120

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   ++P +   Q+IPIL      +V   ++    ++   L + +  F    + +   M
Sbjct: 121 AMDRSVMPWIIASQTIPILAVAPMIIVVLNSIGISGLLPKALISTYLSF----FPIVVGM 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +      ++  ++  S  Q FW L  P ++P L  ++ ++++      +  E+  
Sbjct: 177 VKGLRSPETIQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGEL-- 234

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  + G+G+ +         + I  A+    GV  +   ++
Sbjct: 235 ---PTGAVAGLGARLLSGSYYGQTVQIWAALFMAAGVAAILVSII 276



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 75/192 (39%), Gaps = 5/192 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++   I +++ I + + I     +   + P+       P     P++
Sbjct: 86  SLVYHAGVTLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAVAPMI 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + I+  ++ G  +      ++  +++ +  + +  +
Sbjct: 146 IVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGLRSPETIQLDLMHTYNASPAQIFWKL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   PY  T    A   A   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 206 RWPSALPYLFTSLKIAIAIALVGAIVGELPTGA-----VAGLGARLLSGSYYGQTVQIWA 260

Query: 558 GVLIMCCFVLAL 569
            + +       L
Sbjct: 261 ALFMAAGVAAIL 272


>gi|324989548|gb|EGC21494.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK353]
          Length = 281

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 95/242 (39%), Gaps = 16/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 40  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 98

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 99  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 153 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 211 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIILVSVIS 263

Query: 254 LY 255
           L 
Sbjct: 264 LL 265



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 50  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 109

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 110 ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 165

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 166 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 225

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 226 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 270


>gi|329119723|ref|ZP_08248403.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464172|gb|EGF10477.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Neisseria bacilliformis ATCC BAA-1200]
          Length = 265

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 100/247 (40%), Gaps = 18/247 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAM 76
                 + +  + +   G                      L Q+ +     +  R  + +
Sbjct: 24  GFAGLGVAMAAVALWAWGSAVFGAFMLPAPSEVFAHAWDLLKQFQTAEIGVSLWRAAAGI 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            I+L+        A + +    +L P++ ++ ++P + ++   + +F    P        
Sbjct: 84  GIALVSGVAAGLAAGRFKTAMALLKPLMTVLLAMPPIIWVVMALFWFGFGNP-------- 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +FA+          S    + ++ +  EE+  ++RL   +K  YL +P     L+ ++
Sbjct: 136 SVLFAVIVLVAPLTFASAAVGMASVDKKNEELFDAYRLGRLKKIRYLYLPHLTGYLISSI 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++++ G   V+ +E++   +      GIG+ IA A    +  A++  ++ ++  + L+D
Sbjct: 196 GVAVAMGVKVVIMAELLGASE------GIGARIADARAMLETSAVMAYVVLVIAFVALFD 249

Query: 257 QLLFRPM 263
            L+ +P+
Sbjct: 250 YLIIKPL 256



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++++R    I IA +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GVSLWRAAAGIGIALVSGVAAGLAAGRFKTAMALLKPLMTVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ LP + 
Sbjct: 133 GNPSVLFAVIVLVAPLTF----ASAAVGMASVDKKNEELFDAYRLGRLKKIRYLYLPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYLISSIGVAVAMGVKVVIMAELLG------ASEGIGARIADARAMLETSAVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV   +  +  PL
Sbjct: 243 AFVALFDYLIIKPL 256


>gi|228996048|ref|ZP_04155700.1| ABC transporter, permease [Bacillus mycoides Rock3-17]
 gi|229003664|ref|ZP_04161476.1| ABC transporter, permease [Bacillus mycoides Rock1-4]
 gi|228757501|gb|EEM06734.1| ABC transporter, permease [Bacillus mycoides Rock1-4]
 gi|228763615|gb|EEM12510.1| ABC transporter, permease [Bacillus mycoides Rock3-17]
          Length = 228

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 66/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     I     P        P     PL V    Y 
Sbjct: 36  ATLYVVLIGVVISIVLGVGLAMSMNASKWIERAFYPLLVASQTIPITALAPLFVLWFGYS 95

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 96  ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALP 151

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 152 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 205

Query: 565 FVLALNRFL 573
             +    F+
Sbjct: 206 LAILFVLFV 214



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 77/199 (38%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T   +L  +VIS++     A     S+ +     P+L   Q+IPI       V
Sbjct: 30  LTVHLPATLYVVLIGVVISIVLGVGLAMSMNASKWIERAFYPLLVASQTIPITALAPLFV 89

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F          +  + +        + +  + Y  L +  ++ EE+  ++  +    F
Sbjct: 90  LWFGY--------SIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIF 141

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   
Sbjct: 142 LKLKLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAG 195

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +   ++ +  +  L+   +
Sbjct: 196 VFAPIVLLSLLAILFVLFV 214


>gi|150015821|ref|YP_001308075.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149902286|gb|ABR33119.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 263

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 91/237 (38%), Gaps = 17/237 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAW-------QSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++ +L +  F  +  +A  + W            I +  +  +   +I    +T +  ++
Sbjct: 21  ITRILILVIFIALWQIAANLKWIDPFLTSSPTRVIESFVSLYEGGGLIKHIAVTCYETIL 80

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              + +I+   + + + + P +S  + P+  +L A P     P+++  +     N    +
Sbjct: 81  GFSLGTILGALIAVILWWSPFVSKILDPYLVVLNALPKVALAPIIIFWIG----NGIPAI 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++ +  +    +  V+ G +    +   + ++F  T  +  RY+I P   P  ++    
Sbjct: 137 IVIALLISVITTIIGVLTGFNEIDKEKIMLMNTFRATKIQILRYLIFPYSIPILISALKI 196

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             G +W   I+ E        +   GLG  I    +      V++ ++I+      +
Sbjct: 197 NVGLSWVGVIMGEFL------VAKNGLGFLIVYGGQVAQLDMVMMSIVILSAIAFIM 247



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 95/251 (37%), Gaps = 16/251 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRT 68
             R+I      +L   + +  I   L  I    T+ P  +++      +   L ++ + T
Sbjct: 15  TKRKILITRILILVIFIALWQIAANLKWIDPFLTSSPTRVIESFVSLYEGGGLIKHIAVT 74

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               +    +  +   + A +   S  +  +L P L ++ ++P +      + +  N  P
Sbjct: 75  CYETILGFSLGTILGALIAVILWWSPFVSKILDPYLVVLNALPKVALAPIIIFWIGNGIP 134

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A I       V      +      I ++   +  +FR +  Q   YL  P+S
Sbjct: 135 --------AIIVIALLISVITTIIGVLTGFNEIDKEKIMLMNTFRATKIQILRYLIFPYS 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L+  + +++   W  V+  E +V  +      G+G  I    +   L  ++ +++ +
Sbjct: 187 IPILISALKINVGLSWVGVIMGEFLVAKN------GLGFLIVYGGQVAQLDMVMMSIVIL 240

Query: 249 LGVIFLYDQLL 259
             + F+  +++
Sbjct: 241 SAIAFIMYEVV 251


>gi|154252336|ref|YP_001413160.1| binding-protein-dependent transport systems inner membrane
           component [Parvibaculum lavamentivorans DS-1]
 gi|154156286|gb|ABS63503.1| binding-protein-dependent transport systems inner membrane
           component [Parvibaculum lavamentivorans DS-1]
          Length = 273

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 76/198 (38%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + + +A++I    GI  G  P+  +    F  +L+  P     P++        
Sbjct: 79  SLTRLGIGVAVATVIGGIFGILQGLVPYFRATFNAFTGVLSMIPPLAVLPILFIIFGLGE 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       +L+  G   +I+ ++    +  P++    A +   + W+    +++P + P 
Sbjct: 139 L----AKVVLVAVGITPFIIRDLALRTAEIPHEEIIKAQTLGASTWQIILRVVVPQMLPR 194

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   + G AW   I +E  +        +GLG  I       +   ++  V  +   
Sbjct: 195 LIDGVRLSLGAAWLFLIAAEAIA------SDSGLGYRIFLMRRYLAMDVILPYVAWITIL 248

Query: 566 VLALN---RFLWHPLYLY 580
             +L+   R      + +
Sbjct: 249 AFSLDLALRLFQRVAFRW 266



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 17/212 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+   + ++ +   ++  L                ++  IP L  L    
Sbjct: 72  LWSDTVSSLTRLGIGVAVATVIGGIFGILQGLVPYFRATFNAFTGVLSMIPPLAVLPILF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           ELA +  +       +   +      IP +    +++   S WQ  
Sbjct: 132 IIFGLG--------ELAKVVLVAVGITPFIIRDLALRTAEIPHEEIIKAQTLGASTWQII 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP  +P L+  + +S+   W F++A+E I          G+G  I L  +   +  
Sbjct: 184 LRVVVPQMLPRLIDGVRLSLGAAWLFLIAAEAIASDS------GLGYRIFLMRRYLAMDV 237

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
           IL  +  +  + F  D   +L  R    W  +
Sbjct: 238 ILPYVAWITILAFSLDLALRLFQRVAFRWMYR 269


>gi|110634428|ref|YP_674636.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285412|gb|ABG63471.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 248

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 15/241 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
                G      P          +    + +    +     +  +++++       L   
Sbjct: 20  ASFAVGPNLVPTPLSTASAALELMRDGKISEPLLSSLTIYFTGYLLAVIVGIPIGMLMGG 79

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
            R LG  L   +  + + P + F+   +++              A I  +F   V  +  
Sbjct: 80  IRDLGRTLDIYVSALMATPRVAFIPLIILFLGLG--------PEAKIAVVFLGAVIPILI 131

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
             Y  + N   +L E++RS   +  Q +W + +P ++  +V  + +  + G    V +E+
Sbjct: 132 GTYSGILNSDAELIEMARSMGATRSQIYWRIMLPGALGFVVMGLRIGATIGLINTVVAEL 191

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
                 +  L       AL      +      +L +  +  L  Q L R +  WS ++R+
Sbjct: 192 YTAASGLGGLL------ALYGNTFQMARYFVVVLALALIGGLVSQGL-RALEAWSGRWRV 244

Query: 273 E 273
            
Sbjct: 245 T 245



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 7/220 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W+     V   +    +              +      ++       ++A I+ IP+G+
Sbjct: 16  IWWAASFAVGPNLVPTPLSTASAALELMRDGKISEPLLSSLTIYFTGYLLAVIVGIPIGM 75

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G    +   +  +   L A P   F PL++  +             ++  G    IL 
Sbjct: 76  LMGGIRDLGRTLDIYVSALMATPRVAFIPLIILFLGLGP----EAKIAVVFLGAVIPILI 131

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
              +G      +  E+A S   T  + +  I+LPG   + V G           ++V+E+
Sbjct: 132 GTYSGILNSDAELIEMARSMGATRSQIYWRIMLPGALGFVVMGLRIGATIGLINTVVAEL 191

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            +            A    + +   +  VVL + ++   V
Sbjct: 192 YTAASGLGGLL---ALYGNTFQMARYFVVVLALALIGGLV 228


>gi|327189801|gb|EGE56941.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 293

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLVAEYIM 274



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V  + +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLVAEYIMTLVENRLAKWRPQQHLDT 292


>gi|305390407|gb|ADM52730.1| ABC transporter [Paenibacillus sabinae]
          Length = 164

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           I   + P  + L+     V F +++  +             ++ +   W I+F+ ++G  
Sbjct: 2   IRIALGPVLEWLSHINPFVVFHIIIVFIGAG----EPTKVSIIAWACIWPIMFSTLSGMI 57

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D  + A SF ++  R    ++LP  FP  +TG   A G A    I +E+       
Sbjct: 58  HADADTVKAARSFGLSRLRLTTKVLLPLAFPSILTGTRLAAGYALLFLIAAEMMG----- 112

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             T+GLG  I  +       ++  GVLI+    + L+  +
Sbjct: 113 -STSGLGFMIYTAQANYQIVQMFSGVLIIAVLAIVLDGIM 151



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 14/161 (8%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            L P+L+ +  I         +V+     P KV     A I        W + FS    +
Sbjct: 5   ALGPVLEWLSHINPFVVFHIIIVFIGAGEPTKVSIIAWACI--------WPIMFSTLSGM 56

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            +   D  + +RSF LS  +    + +P + P ++    ++      F++A+EM+     
Sbjct: 57  IHADADTVKAARSFGLSRLRLTTKVLLPLAFPSILTGTRLAAGYALLFLIAAEMMG---- 112

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G  I  A     ++ +   +L +  +  + D ++
Sbjct: 113 --STSGLGFMIYTAQANYQIVQMFSGVLIIAVLAIVLDGIM 151


>gi|228906484|ref|ZP_04070360.1| ABC transporter, permease [Bacillus thuringiensis IBL 200]
 gi|228853033|gb|EEM97811.1| ABC transporter, permease [Bacillus thuringiensis IBL 200]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVLI 236



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVVLI 236


>gi|313668963|ref|YP_004049247.1| ABC transporter, permease protein [Neisseria lactamica ST-640]
 gi|313006425|emb|CBN87888.1| putative ABC transporter, permease protein [Neisseria lactamica
           020-06]
          Length = 277

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 85  GISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 145 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 200

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 201 GYVISSIGVAAAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 254

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 255 VFVSLFEYLITKPL 268



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 102/250 (40%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 33  LWSGFAGLSVAMVVVALWAWGSAVFGGFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ ++ ++P + ++   + +F    P     
Sbjct: 93  VGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGNP----- 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 148 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++ + G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 205 SSIGVAAAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 258

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 259 LFEYLITKPL 268


>gi|302531612|ref|ZP_07283954.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
 gi|302440507|gb|EFL12323.1| nitrate ABC transporter, permease [Streptomyces sp. AA4]
          Length = 292

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
           +  S    +  +  R + ++R      +L L        +   FW            W+ 
Sbjct: 18  DILSRAKKSAGRHKRNVWLLRLAILVAWLGLWE------LAGRFWIDPFFYSMPSKIWER 71

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +       T  D   + +   +T+   V+  ++ ++  +  G+ +G   +++  + PF +
Sbjct: 72  LTEWFTTGT--DFGTIWYQILVTVEEAVIGFVLGAVAGVICGVILGRSAYLAEVLAPFIK 129

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
              A P  V   L V        +    + +L+ F       FN   GA     +  + A
Sbjct: 130 AANAMPRIVLAALFVIWFGLGLSSKVATVFVLVFFAVF----FNAFTGAREVDRNLIDNA 185

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                T W+  + I+LP    + ++    A G A   ++V E            G+G  I
Sbjct: 186 RILGATRWQVLQSIVLPSATSWILSSLHVAFGFALIGAVVGEY------TGAKAGMGFLI 239

Query: 544 AESTEKGSFPEVVLGVLIMCCFVL 567
           A +        V  G+L++    L
Sbjct: 240 ANAQGTFDTAGVYAGMLVIMVVAL 263



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 17/223 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
             D  ++      T    +   V+  +   +   +  +S  L  VL P +    ++P + 
Sbjct: 79  GTDFGTIWYQILVTVEEAVIGFVLGAVAGVICGVILGRSAYLAEVLAPFIKAANAMPRIV 138

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V++F      KV    +   FA+F +               + R+L + +R    
Sbjct: 139 LAALFVIWFGLGLSSKVATVFVLVFFAVFFNAFT--------GAREVDRNLIDNARILGA 190

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + WQ    + +P +   ++ ++ ++     F ++ +   VVG+      G+G  IA A  
Sbjct: 191 TRWQVLQSIVLPSATSWILSSLHVAFG---FALIGA---VVGEYTGAKAGMGFLIANAQG 244

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNKFRLER 274
             D   +   ML ++ V    + L+    R ++ W  +   + 
Sbjct: 245 TFDTAGVYAGMLVIMVVALFAEWLIGSAERKLLRWRPQMSADD 287


>gi|163938372|ref|YP_001643256.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
 gi|163860569|gb|ABY41628.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
          Length = 255

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     + P   +    P  V  PL +    Y  
Sbjct: 60  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFIIWFGYG- 118

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 119 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 176 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 228

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 229 VTLCLYFI 236



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 14  WLILLIAIWEGSVSLFKIEPWILPKPSAIVQELIGMKDLLLPNTVQTLQEVIIGLFFAIL 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 74  LGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ + + WQ +  +  P  +P     + ++++
Sbjct: 133 -------PIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 186 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGVAAIIVMVTLCLYFI 236


>gi|325528390|gb|EGD05531.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia sp. TJI49]
          Length = 234

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 17/227 (7%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I   + + ++   L      T  R+     I       +  L A SR     L P 
Sbjct: 18  PPERIASTLRVLIETGELRDNLLITLHRLALGFAIGATSGAAFGILLASSRLFSDYLRPT 77

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
            D+++  P L  +   V+      P K++    A  F         +  + +  + + PR
Sbjct: 78  FDLLRQGPTLTLIPLLVLLIGVDEPLKLVVVGKAVFF--------PVALAAFAGVHDTPR 129

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           DL E++R + +  +     + +P ++P L+  + ++++  W  +VA E++          
Sbjct: 130 DLVEMARHYGVGRFALLRDVLLPAALPPLLTGIRIALARAWLALVAVELLSADS------ 183

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
           GIG  + LA +   L  +L  +  +  + F  D+   L+ R  + W 
Sbjct: 184 GIGQMMELARQMLRLDVVLVDVAIIGLIGFALDRSIALVQRHALRWQ 230



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           WF     V       ++  ++     +D L       IT+ R+ +   I +      GI 
Sbjct: 10  WFPPQLVVPPERIASTLRVLIETGELRDNL------LITLHRLALGFAIGATSGAAFGIL 63

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +      S  ++P   LL   P       ++  +            +++     + +   
Sbjct: 64  LASSRLFSDYLRPTFDLLRQGPTLT----LIPLLVLLIGVDEPLKLVVVGKAVFFPVALA 119

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG    P D  E+A  + +  +   R ++LP   P  +TG   A   AW A +  E+ 
Sbjct: 120 AFAGVHDTPRDLVEMARHYGVGRFALLRDVLLPAALPPLLTGIRIALARAWLALVAVELL 179

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           S        +G+G  +  + +      V++ V I+     AL+R
Sbjct: 180 S------ADSGIGQMMELARQMLRLDVVLVDVAIIGLIGFALDR 217


>gi|296116592|ref|ZP_06835202.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
 gi|295976804|gb|EFG83572.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter hansenii ATCC 23769]
          Length = 261

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 14/210 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           ++    +      T+   +  +++       + + +   P +     P   L  A P   
Sbjct: 53  WRQRALLGDSALTTLVETLCGLVLGVCGGGALALLMALSPSVRRWTMPLVLLSQAVPVFA 112

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL+V    +   +  +   L++ F     +  +   G    P D+ ++A +   + WR
Sbjct: 113 LAPLLVLWFGFGMASKIVMAVLVIFF----PVTSSFADGLRQTPADWIDLARTMGASRWR 168

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              Y+ LP   P   +G   A   A   ++V E          ++GLG  +  +  +   
Sbjct: 169 VLLYVRLPAALPALASGMRVATAIAPIGAVVGEWVG------ASSGLGFLMQTANTRFET 222

Query: 553 PEVVLGVLIMCCFVLAL----NRFLWHPLY 578
             +   +L++    + L    +  L   LY
Sbjct: 223 DLMFAALLVLSAMTVLLWWGMDLMLRRALY 252



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 17/209 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  T +  L  +V+ +      A L A S  +    +P++ + Q++P+       V
Sbjct: 59  LGDSALTTLVETLCGLVLGVCGGGALALLMALSPSVRRWTMPLVLLSQAVPVFALAPLLV 118

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      K++ A L   F         +T S    L   P D  +++R+   S W+  
Sbjct: 119 LWFGFGMASKIVMAVLVIFF--------PVTSSFADGLRQTPADWIDLARTMGASRWRVL 170

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            Y+ +P ++P L   M ++ +      +A    VVG+ V    G+G  +  A    +   
Sbjct: 171 LYVRLPAALPALASGMRVATA------IAPIGAVVGEWVGASSGLGFLMQTANTRFETDL 224

Query: 241 ILYAMLTMLGVIFLY---DQLLFRPMIVW 266
           +  A+L +  +  L      L+ R  + W
Sbjct: 225 MFAALLVLSAMTVLLWWGMDLMLRRALYW 253


>gi|300767244|ref|ZP_07077156.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300495063|gb|EFK30219.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 209

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++ + ++       L  + + +  V++ I  ++Q+IP +  L   + +F           
Sbjct: 26  SLFLGIIVAVPIGILLTRVKPIANVVMSIASMLQTIPAIALLALMIPFFGIG-------- 77

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + AI A+F   +  +  + Y  L ++   L + ++   ++GWQ    + +P + P ++ 
Sbjct: 78  AIPAIIALFIYSLLPILRNTYLGLEDVDPALIDAAKGMGMTGWQSIVKVELPMAAPVIMA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S +    +V+A   +    + I   G+G +I   +       IL   + ++ +  +
Sbjct: 138 GIRLSAT----YVIAWAALA---SYIGAGGLGDFIFNGLNLYRTDLILGGSIPVIILALI 190

Query: 255 YDQLLFR 261
            D LL +
Sbjct: 191 VDWLLGK 197



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +  I+ +P+GI +     I++ +   A +L   PA     L++        
Sbjct: 20  LYISAFSLFLGIIVAVPIGILLTRVKPIANVVMSIASMLQTIPAIALLALMIPFFGIGA- 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G         + A    +TGW+    + LP   P  
Sbjct: 79  ---IPAIIALFIYSLLPILRNTYLGLEDVDPALIDAAKGMGMTGWQSIVKVELPMAAPVI 135

Query: 507 VTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + G   +     AW A            ++   GLG +I           ++ G + +  
Sbjct: 136 MAGIRLSATYVIAWAAL---------ASYIGAGGLGDFIFNGLNLYRTDLILGGSIPVII 186

Query: 565 FVLALNRFL 573
             L ++  L
Sbjct: 187 LALIVDWLL 195


>gi|209551217|ref|YP_002283134.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536973|gb|ACI56908.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 268

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 15/226 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +    AF+    +  + L GI+ + +P     ++   L+  +L      T    L
Sbjct: 20  RGLPALLAGCAFLAAWEL-YVDLSGIKPSILPAPSRIVIQGWLNREALISNTWPTLGATL 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F F  + L      +   L+PI    Q++P++      V++F          
Sbjct: 79  GGFALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGL------ 132

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q   +  RD+ E+  S + S W+ F    +P ++P   
Sbjct: 133 --LPKILLVALVTFFPLLVALLQGYESTDRDIAELLHSMKASRWRIFRLARLPSALPYFF 190

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             + +S++      + +E            G+G YI  A       
Sbjct: 191 AGLRISITYAVVGAIFAEYAGAAS------GLGIYILNAKNNFRPD 230



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 73  TLGATLGGFALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGL 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  +   D  E+  S   + WR +R   LP   PY
Sbjct: 133 LPK----ILLVALVTFFPLLVALLQGYESTDRDIAELLHSMKASRWRIFRLARLPSALPY 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           +  G   +   A   +I +E A         +GLG YI  +   
Sbjct: 189 FFAGLRISITYAVVGAIFAEYAG------AASGLGIYILNAKNN 226


>gi|331269803|ref|YP_004396295.1| putative ABC transporter permease [Clostridium botulinum BKT015925]
 gi|329126353|gb|AEB76298.1| putative ABC transporter, permease protein [Clostridium botulinum
           BKT015925]
          Length = 248

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 15/236 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSI----GYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIA 397
           ++ IFW  V    ++ I  Q +      ++       +    W   + ++ RV++ ++I+
Sbjct: 13  LILIFWLLVWEIFSLFINNQILFPSPNRVLKSLYELILQEYFWRCIVNSIIRVILGLLIS 72

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ + +GI+ G    +   + P    + A P      + +      +++         +
Sbjct: 73  ILLGMLLGIFSGLNRSLEEVLIPIITTIKAIPVMSIIIIALVWFKASNVS-----IFTTV 127

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I  NVI G  +       +A  + +      R   +P I  Y ++G +   G A
Sbjct: 128 LICLPIIYTNVIEGIKSSDIKLIHMAKVYKVKKRYLIREFYIPSIRNYAISGILMCLGLA 187

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           W  S+ SEV S     +    L +     TE     E+    +++    L      
Sbjct: 188 WKVSVASEVLSTPKYSIGLNLLNSKTTLETE-----ELFAWTIVVVMLSLLFELIF 238



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 105/249 (42%), Gaps = 15/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ ++LV  I ++ ++       P  ++  +   +      +    + +R++  ++IS+L
Sbjct: 15  LIFWLLVWEIFSLFINNQILFPSPNRVLKSLYELILQEYFWRCIVNSIIRVILGLLISIL 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +    +  +R L  VL+PI+  +++IP++  +   +V+F              +IF 
Sbjct: 75  LGMLLGIFSGLNRSLEEVLIPIITTIKAIPVMSIIIIALVWFKASN---------VSIFT 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +  ++ + + +    L  +++ +++          +P      +  ++M + 
Sbjct: 126 TVLICLPIIYTNVIEGIKSSDIKLIHMAKVYKVKKRYLIREFYIPSIRNYAISGILMCLG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   VASE++      I L  + S   L  +E     I+  ML++L       +L+FR
Sbjct: 186 LAWKVSVASEVLSTPKYSIGLNLLNSKTTLETEELFAWTIVVVMLSLLF------ELIFR 239

Query: 262 PMIVWSNKF 270
             +   NKF
Sbjct: 240 CCVNKRNKF 248


>gi|222086853|ref|YP_002545387.1| nitrate/sulfonate/bicarbonate ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221724301|gb|ACM27457.1| nitrate/sulfonate/bicarbonate ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 249

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 94/251 (37%), Gaps = 14/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  ++V+  + ++   I +  +P  +     +  D   L      TT     ++V++L+
Sbjct: 2   TVVVLIVLWQLLVVGADIPQYILPSPLAVAKALVSDWGILWPALWVTTQITFISLVLALI 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A    +SR + +   P+  I+Q  PI+      ++Y            E A +  
Sbjct: 62  GGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAIAPLILIY--------APTRESALLIC 113

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  +M Q L ++  +L  +   +  S WQ   +L +P + P  +  + +   
Sbjct: 114 GFLVAFFPILSNMVQGLKSVDHNLLNLFDLYGASRWQMLLHLKLPAAQPYFMTGLRIGGG 173

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM----LGVIFLYDQ 257
                 V +E         P  G+   +  A   Q++  +  A+L +    + +  L   
Sbjct: 174 LSLIASVVAEFAAGSGG--PNSGLAFRLLEAQYRQNMPRLFAALLLLSALGVAIFALTSF 231

Query: 258 LLFRPMIVWSN 268
           + +  +  W  
Sbjct: 232 ISWLSLHRWHE 242



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L + W  +V G  I          V      D   +     +T     + +++A I  +
Sbjct: 5   VLIVLWQLLVVGADIPQYILPSPLAVAKALVSDWGILWPALWVTTQITFISLVLALIGGV 64

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I++     I     P A +L   P     PL++     Y       L +       +
Sbjct: 65  GFAIFLVQSRWIELAFYPLAVILQVTPIVAIAPLILI----YAPTRESALLICGFLVAFF 120

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N++ G  +  ++   +   +  + W+   ++ LP   PY++TG     G +  AS+
Sbjct: 121 PILSNMVQGLKSVDHNLLNLFDLYGASRWQMLLHLKLPAAQPYFMTGLRIGGGLSLIASV 180

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPE---VVLGVLIMCCFVLALNRFL-WHPLY 578
           V+E A+        +GL   + E+  + + P     +L +  +   + AL  F+ W  L+
Sbjct: 181 VAEFAAGSG--GPNSGLAFRLLEAQYRQNMPRLFAALLLLSALGVAIFALTSFISWLSLH 238

Query: 579 LYGTRCLR 586
            +    L+
Sbjct: 239 RWHESSLK 246


>gi|324991897|gb|EGC23820.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK405]
 gi|324996213|gb|EGC28123.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK678]
 gi|327458522|gb|EGF04872.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1]
 gi|327490389|gb|EGF22175.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1058]
          Length = 281

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 95/242 (39%), Gaps = 16/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 40  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLRVAL 98

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 99  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 153 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 211 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIILVSVIS 263

Query: 254 LY 255
           L 
Sbjct: 264 LL 265



 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 50  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLRVALLGLVLGVILAC 109

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 110 ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 165

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 166 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 225

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 226 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 270


>gi|52144586|ref|YP_082242.1| ABC transporter, permease [Bacillus cereus E33L]
 gi|51978055|gb|AAU19605.1| ABC transporter, permease [Bacillus cereus E33L]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTMWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I+I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  IVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGIVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|328946954|ref|YP_004364291.1| ABC transporter [Treponema succinifaciens DSM 2489]
 gi|328447278|gb|AEB12994.1| ABC transporter related protein [Treponema succinifaciens DSM 2489]
          Length = 487

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 14/242 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +  F L+    ++++        P  +           +  +  + T  R+  A  I
Sbjct: 8   VFSIAFFFLLWKFFSLVIDSPLVLPSPESVAADFFSLAVEKNFLKSLAFTFFRVFCAFFI 67

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S     ++  L  K   L       L  ++S+P++  +   + +         +G++   
Sbjct: 68  SSFLGILFGFLCTKFSVLKFFFELPLTFIRSVPLVSVILIVLFW---------LGSDSVP 118

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +FA        M  S +       + +E V   F+++  QKF +L +P++   L   M  
Sbjct: 119 VFAAVLLSFPVMFTSAFSGFSFEDKKMENVCTIFKITEMQKFLFLKIPYAKEFLKDAMEN 178

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S    W  V A+E++ V     P   +GS +       ++  +    + ++ + FL +++
Sbjct: 179 SCGMIWKAVAAAEVLSV-----PKFALGSQLQNFQVVLEISKVFAVTIFIVLLGFLSEKI 233

Query: 259 LF 260
           L 
Sbjct: 234 LL 235



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 82/255 (32%), Gaps = 18/255 (7%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV------IWLGCITMFRV 390
           N++  ++  I +F ++      +    +          D   +      +     T FRV
Sbjct: 2   NKKKIFVFSIAFFFLLWKFFSLVIDSPLVLPSPESVAADFFSLAVEKNFLKSLAFTFFRV 61

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                I+S + I  G        +    +     + + P      +++        +  +
Sbjct: 62  FCAFFISSFLGILFGFLCTKFSVLKFFFELPLTFIRSVPLVSV--ILIVLFWLGSDSVPV 119

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           + ++L+ F   +   F+   G S      + V + F IT  + + ++ +P    +     
Sbjct: 120 FAAVLLSFPVMFTSAFS---GFSFEDKKMENVCTIFKITEMQKFLFLKIPYAKEFLKDAM 176

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +CG  W A   +EV S          LG+ +          +V    + +        
Sbjct: 177 ENSCGMIWKAVAAAEVLSVPKFA-----LGSQLQNFQVVLEISKVFAVTIFIVLLGFLSE 231

Query: 571 RFLWHPLYLYGTRCL 585
           + L   ++ +  +  
Sbjct: 232 KILL--IFFFALKKF 244


>gi|317133282|ref|YP_004092596.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315471261|gb|ADU27865.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 201

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                   + + I++L   +     ++       ++ I D++Q+IP L  L   ++ F  
Sbjct: 9   LEHLAMTAAGVAIAVLIGTLAGIWISRKTAFAGPVLYIADVIQTIPSLALLAILMIVFGL 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    +L  I  +    +  +  + Y  L  IP  + E +R   +S  Q    + +
Sbjct: 69  G--------DLTVIIGLCLYSLLPVIRNTYTGLTAIPPSIREAARGMGMSSIQSLIKVEL 120

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + ++        V   +I  G       G+G  I   I+  D   I+   
Sbjct: 121 PLAVPMILSGIRIAFVTALGTAVIGVLIGSG-------GLGYIIYRGIQALDWGMIIEGT 173

Query: 246 LTMLGVIFL 254
           + ++ +  L
Sbjct: 174 IPVVLLSLL 182



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA +I    GIWI  +   +  +   A ++   P+     +++       L
Sbjct: 12  LAMTAAGVAIAVLIGTLAGIWISRKTAFAGPVLYIADVIQTIPSLALLAILMIVFGLGDL 71

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                + + +   +   ++ N   G +A P   +E A    ++  +    + LP   P  
Sbjct: 72  T----VIIGLCLYSLLPVIRNTYTGLTAIPPSIREAARGMGMSSIQSLIKVELPLAVPMI 127

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   A   A   +++  +   G       GLG  I    +   +  ++ G + +    
Sbjct: 128 LSGIRIAFVTALGTAVIGVLIGSG-------GLGYIIYRGIQALDWGMIIEGTIPVVLLS 180

Query: 567 LALNRFLWHPLYLYGTRC 584
             L +++++ L     R 
Sbjct: 181 -LLAQYVFNKLQRLEKRR 197


>gi|229009866|ref|ZP_04167086.1| ABC transporter, permease protein [Bacillus mycoides DSM 2048]
 gi|229056218|ref|ZP_04195642.1| ABC transporter, permease protein [Bacillus cereus AH603]
 gi|229131378|ref|ZP_04260277.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST196]
 gi|229165379|ref|ZP_04293165.1| ABC transporter, permease protein [Bacillus cereus AH621]
 gi|228618083|gb|EEK75122.1| ABC transporter, permease protein [Bacillus cereus AH621]
 gi|228652069|gb|EEL08007.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST196]
 gi|228721120|gb|EEL72654.1| ABC transporter, permease protein [Bacillus cereus AH603]
 gi|228751484|gb|EEM01290.1| ABC transporter, permease protein [Bacillus mycoides DSM 2048]
          Length = 213

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     + P   +    P  V  PL +    Y  
Sbjct: 18  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFIIWFGYG- 76

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 77  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 133

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 134 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 186

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 187 VTLCLYFI 194



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 11  LLPNTVQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFI 70

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 71  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 122

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 123 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 175

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 176 RVFGVAAIIVMVTLCLYFI 194


>gi|219684625|ref|ZP_03539568.1| phosphate ABC transporter, permease protein [Borrelia garinii PBr]
 gi|219671987|gb|EED29041.1| phosphate ABC transporter, permease protein [Borrelia garinii PBr]
          Length = 514

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIIKIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIIKIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|149278703|ref|ZP_01884839.1| hypothetical protein PBAL39_23777 [Pedobacter sp. BAL39]
 gi|149230698|gb|EDM36081.1| hypothetical protein PBAL39_23777 [Pedobacter sp. BAL39]
          Length = 534

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 15/186 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +       +++ +LL       L A+ R+L   ++    ++Q+IP +  L F +
Sbjct: 30  LLTQTLQHVGLTFISLIFALLIGLPLGILIARKRKLSGSVLGFAGVLQTIPSIALLGFMI 89

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                            AI A+    +  +  + Y  +  I   + E +R+  +S  Q  
Sbjct: 90  PLIGIG--------AKPAIVALLIYALLPIIRNTYTGIIGIDPHVREAARAMGMSRQQIL 141

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +MP ++  +  +        V +  +    + I   G+G +I   I   +   
Sbjct: 142 VRVELPLAMPVILAGIRTA-------TVINVGVATLASYIAAGGLGEFIFGGISLNNTNM 194

Query: 241 ILYAML 246
           IL   +
Sbjct: 195 ILAGAI 200



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
             +  +S  +  FA +L   P+      ++  +        + L +  +      I+ N 
Sbjct: 60  ARKRKLSGSVLGFAGVLQTIPSIALLGFMIPLIGIGAKPAIVALLIYALL----PIIRNT 115

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G        +E A +  ++  +    + LP   P  + G  TA       + ++   +
Sbjct: 116 YTGIIGIDPHVREAARAMGMSRQQILVRVELPLAMPVILAGIRTATVINVGVATLASYIA 175

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            G       GLG +I       +   ++ G +
Sbjct: 176 AG-------GLGEFIFGGISLNNTNMILAGAI 200


>gi|310815495|ref|YP_003963459.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308754230|gb|ADO42159.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 313

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 16/216 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L    L  +  +T    L   V+  +     A     SR + + ++P   I Q+IPI+ 
Sbjct: 103 SLSNAGLVLHTLKTIETTLYGFVLGAVLGIALAVGIVYSRAMDLSVMPWAIISQTIPIVA 162

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V+   +     ++   + A +  F    + +   M + L        ++ R++  
Sbjct: 163 LAPMIVLLLSSAGITGLVPRAIIAAYLSF----FPVLVGMVKGLRAPDHMQLDLMRTYNA 218

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q FW L +P ++P L  ++ ++++G     + SE+     +     G+G+ +     
Sbjct: 219 SAAQGFWKLRLPMAVPYLFASLKVAIAGALVGAIVSEL-----STSSTQGLGARMLQGSY 273

Query: 235 EQDLLAIL-------YAMLTMLGVIFLYDQLLFRPM 263
               + I             M+GV+ + D+L+ R M
Sbjct: 274 YGQTVQIWAALLAAAILAAAMVGVVGVADRLVRRAM 309



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 83/206 (40%), Gaps = 12/206 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     T+   +   ++ +++ I + + I +   +   + P+A +    P     P++V
Sbjct: 109 LVLHTLKTIETTLYGFVLGAVLGIALAVGIVYSRAMDLSVMPWAIISQTIPIVALAPMIV 168

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +S   +   +  +++  + + + +L  ++ G  A  +   ++  +++ +  + +  + 
Sbjct: 169 LLLSSAGITGLVPRAIIAAYLSFFPVLVGMVKGLRAPDHMQLDLMRTYNASAAQGFWKLR 228

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV-- 556
           LP   PY       A  GA   +IVSE+         T GLGA + + +  G   ++   
Sbjct: 229 LPMAVPYLFASLKVAIAGALVGAIVSEL-----STSSTQGLGARMLQGSYYGQTVQIWAA 283

Query: 557 -----LGVLIMCCFVLALNRFLWHPL 577
                +    M   V   +R +   +
Sbjct: 284 LLAAAILAAAMVGVVGVADRLVRRAM 309


>gi|326404147|ref|YP_004284229.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325051009|dbj|BAJ81347.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 275

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--- 378
             R      F++  SN  +   L   W  +V    +          + H  ++  L    
Sbjct: 13  PPRRGRLAGFVRRHSNPLILIALLAIWQMLVGFGLVHNPAVPSPTAIAHSLWKGFLGPHH 72

Query: 379 -VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T+ R+++   IA +    +G+  G    I++ + P   L    P  V  P++
Sbjct: 73  ILAIATAATLGRLILGFAIALLAASALGLLAGRNDDIAAALNPLVALWIPLPGIVTIPVL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +          +   +IF     +    + GA +       VA S+  T W    +I
Sbjct: 133 SLWLGVGQA----VIVCTVIFSAWIPLYLGALQGARSVAARQLWVARSYGATRWSTVCHI 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I+P      +       G AW A I +E+           GLG  I  + +      +  
Sbjct: 189 IVPSALVQMLPALRVGMGYAWRAVIAAEII-----TQHGEGLGVTIFAARQFFDVATMYA 243

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           GV+++    L + + L+  L     +   L
Sbjct: 244 GVILIALLGLTIEKILFPQLERRTLKRWGL 273



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 91/251 (36%), Gaps = 18/251 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--LDVHS-LPQYASRTTL 70
           R   N   L+A + +  ++                +        L  H  L    + T  
Sbjct: 24  RRHSNPLILIALLAIWQMLVGFGLVHNPAVPSPTAIAHSLWKGFLGPHHILAIATAATLG 83

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R++    I+LL       LA ++  +   L P++ +   +P +  +    ++        
Sbjct: 84  RLILGFAIALLAASALGLLAGRNDDIAAALNPLVALWIPLPGIVTIPVLSLW-------- 135

Query: 131 VIGAELAAIFAIFTSQVW-NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +G   A I        W  +     Q   ++      V+RS+  + W    ++ VP ++
Sbjct: 136 -LGVGQAVIVCTVIFSAWIPLYLGALQGARSVAARQLWVARSYGATRWSTVCHIIVPSAL 194

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             ++  + + M   W  V+A+E+I          G+G  I  A +  D+  +   ++ + 
Sbjct: 195 VQMLPALRVGMGYAWRAVIAAEIIT-----QHGEGLGVTIFAARQFFDVATMYAGVILIA 249

Query: 250 GVIFLYDQLLF 260
            +    +++LF
Sbjct: 250 LLGLTIEKILF 260


>gi|228906164|ref|ZP_04070053.1| ABC transporter, permease protein [Bacillus thuringiensis IBL 200]
 gi|228937668|ref|ZP_04100305.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970557|ref|ZP_04131207.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977127|ref|ZP_04137528.1| ABC transporter, permease protein [Bacillus thuringiensis Bt407]
 gi|228782575|gb|EEM30752.1| ABC transporter, permease protein [Bacillus thuringiensis Bt407]
 gi|228789144|gb|EEM37073.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822042|gb|EEM68033.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228853573|gb|EEM98341.1| ABC transporter, permease protein [Bacillus thuringiensis IBL 200]
          Length = 207

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVI 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 74/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F            L  +  +     + +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGM--------LPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K      
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSFLTAR 170

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +      ++ V      ++
Sbjct: 171 VFGVAAIIVIVTLCLYFIV 189


>gi|242243449|ref|ZP_04797894.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
 gi|242233069|gb|EES35381.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
          Length = 211

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           + A+VI+++       L +K  +L  V + I  ++Q+IP L
Sbjct: 5   ISEHSGMLFTKTFEHLYISIVALVIAIIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F           +  AI A+F   +  +  +    + NI  +L E  RS  
Sbjct: 65  AVLALMIPLFGVG--------KTPAIIALFLYVLLPILNNTIIGIQNIDSNLREAGRSMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++P ++  + +S      +   +  +  G       G+G +I   +
Sbjct: 117 MTNFQLMKDVELPLALPLILSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   I+ A + +  +  + D +L
Sbjct: 170 ALFEPSMIITATILVTAIALIVDYVL 195



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +V ++IA I+ +P+GI +  +  +S      A +L   P      L++        
Sbjct: 20  LYISIVALVIAIIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTLAVLALMIPLFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L ++      IL N I G     ++ +E   S  +T ++  + + LP   P  
Sbjct: 80  PAIIALFLYVLL----PILNNTIIGIQNIDSNLREAGRSMGMTNFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG +I           ++   +++    
Sbjct: 136 LSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLALFEPSMIITATILVTAIA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYVL 195


>gi|223986520|ref|ZP_03636519.1| hypothetical protein HOLDEFILI_03834 [Holdemania filiformis DSM
           12042]
 gi|223961516|gb|EEF66029.1| hypothetical protein HOLDEFILI_03834 [Holdemania filiformis DSM
           12042]
          Length = 197

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 79/188 (42%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++A+ ++L+F      LA  ++   +V+  I D++Q+IP L  L   +++         
Sbjct: 13  VVAAICLTLVFGLPCGILAYFNKTFKVVIFKITDVLQTIPSLALLGIIMIFLG------- 65

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G +L  +  +F   +  +  + Y  L  I   ++E ++   +    +  ++ +P + P 
Sbjct: 66  -GNKLTVVVGLFLYSLLPVVRNTYTGLSGIDPAVKEAAKGMGMGKLYQLIHVELPIAFPV 124

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +++      + A+                  I   +   ++  IL+  ++++ +
Sbjct: 125 IFTGIRIAVINQ---ISAAVFGTFVGGGGLGT----VIYRGMANMNMKLILFGTVSLMIM 177

Query: 252 IFLYDQLL 259
              +D L+
Sbjct: 178 AVFFDTLM 185



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  I +  +  +P GI   F       I     +L   P+     +++  +        
Sbjct: 13  VVAAICLTLVFGLPCGILAYFNKTFKVVIFKITDVLQTIPSLALLGIIMIFLG----GNK 68

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L + + +   +   ++ N   G S      KE A    +       ++ LP  FP   TG
Sbjct: 69  LTVVVGLFLYSLLPVVRNTYTGLSGIDPAVKEAAKGMGMGKLYQLIHVELPIAFPVIFTG 128

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFV 566
              A     +A++       G +          I       +   ++ G +   IM  F 
Sbjct: 129 IRIAVINQISAAVFGTFVGGGGLGTV-------IYRGMANMNMKLILFGTVSLMIMAVFF 181

Query: 567 LALNRFLWHPLYL 579
             L  F+   LY 
Sbjct: 182 DTLMGFIEKRLYA 194


>gi|299132921|ref|ZP_07026116.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298593058|gb|EFI53258.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 272

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 18/259 (6%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P I DL+A   +  I            +  DI D +               T+LR+++ +
Sbjct: 28  PAIIDLIAVAALWQISTHYFSPAIVPPLK-DIGDAIWKIFSQGDNLVSLLATSLRVVAGL 86

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            IS +              +     P+L ++Q +P L ++ F V++F           E+
Sbjct: 87  TISFVLGAALGVTMGLFSGIRTYARPLLHMIQGVPALSWVVFAVIWFAQ--------VEI 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
              F +    +      +  ++ ++  DL  + ++ R +  Q    + +P  +P ++   
Sbjct: 139 RIAFILIIGTLPAFALYIDSAVKSVNLDLIHLGQALRANRLQILTKIIMPAIVPEIMSAW 198

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY- 255
            +++       V +E+I          G+G  +  A    D+   +   L+++ V+F+Y 
Sbjct: 199 TVNLGNAVRVAVIAELIGSTT------GVGFQLLQAQAVFDMAGAVAWTLSLVAVLFVYQ 252

Query: 256 --DQLLFRPMIVWSNKFRL 272
               L+   ++ W  +  +
Sbjct: 253 GIISLVESRLLAWRPRSEV 271



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T  RVV  + I+ ++   +G+ +G    I +  +P   ++   PA  +    V   + 
Sbjct: 76  LATSLRVVAGLTISFVLGAALGVTMGLFSGIRTYARPLLHMIQGVPALSWVVFAVIWFA- 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 + ++ ++I GT       + +   +   D   +  +      +    II+P I 
Sbjct: 135 ---QVEIRIAFILIIGTLPAFALYIDSAVKSVNLDLIHLGQALRANRLQILTKIIMPAIV 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++      G A   ++++E+         TTG+G  + ++         V   L + 
Sbjct: 192 PEIMSAWTVNLGNAVRVAVIAELIG------STTGVGFQLLQAQAVFDMAGAVAWTLSLV 245

Query: 564 CFVLALNRFL 573
             +      +
Sbjct: 246 AVLFVYQGII 255


>gi|282876710|ref|ZP_06285566.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|293367461|ref|ZP_06614119.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|281294361|gb|EFA86899.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|291318407|gb|EFE58795.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329732179|gb|EGG68533.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU144]
 gi|329735793|gb|EGG72073.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU045]
          Length = 211

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           + A+VI+++       L +K  +L  V + I  ++Q+IP L
Sbjct: 5   ISEHSGMLFAKTFEHLYISIVALVIAIIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F           +  AI A+F   +  +  +    + NI  +L E  RS  
Sbjct: 65  AVLALMIPLFGVG--------KTPAIIALFLYVLLPILNNTIIGIQNIDSNLREAGRSMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++P ++  + +S      +   +  +  G       G+G +I   +
Sbjct: 117 MTNFQLMKDVELPLALPLILSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   I+ A + +  +  + D +L
Sbjct: 170 ALFEPSMIITATILVTAIALIVDYVL 195



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +V ++IA I+ +P+GI +  +  +S      A +L   P      L++        
Sbjct: 20  LYISIVALVIAIIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTLAVLALMIPLFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L ++      IL N I G     ++ +E   S  +T ++  + + LP   P  
Sbjct: 80  PAIIALFLYVLL----PILNNTIIGIQNIDSNLREAGRSMGMTNFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG +I           ++   +++    
Sbjct: 136 LSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLALFEPSMIITATILVTAIA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYVL 195


>gi|30260875|ref|NP_843252.1| ABC transporter, permease protein, putative [Bacillus anthracis
           str. Ames]
 gi|47777846|ref|YP_017360.2| ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183717|ref|YP_026969.1| ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|65318153|ref|ZP_00391112.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165872467|ref|ZP_02217101.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|167635952|ref|ZP_02394259.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
 gi|167641326|ref|ZP_02399578.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|170689153|ref|ZP_02880351.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|170708579|ref|ZP_02899019.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|177654700|ref|ZP_02936488.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|190568809|ref|ZP_03021712.1| putative ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196036574|ref|ZP_03103968.1| putative ABC transporter, permease protein [Bacillus cereus W]
 gi|227816401|ref|YP_002816410.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
 gi|228925914|ref|ZP_04088995.1| ABC transporter, permease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228932158|ref|ZP_04095044.1| ABC transporter, permease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228944477|ref|ZP_04106848.1| ABC transporter, permease [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229120375|ref|ZP_04249622.1| ABC transporter, permease [Bacillus cereus 95/8201]
 gi|229602374|ref|YP_002865322.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
 gi|254683072|ref|ZP_05146933.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725859|ref|ZP_05187641.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A1055]
 gi|254735036|ref|ZP_05192747.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254739866|ref|ZP_05197558.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Kruger B]
 gi|254753205|ref|ZP_05205241.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Vollum]
 gi|254757119|ref|ZP_05209147.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Australia 94]
 gi|30254324|gb|AAP24738.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           Ames]
 gi|47551551|gb|AAT29835.2| putative ABC transporter, permease protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49177644|gb|AAT53020.1| ABC transporter, permease protein, putative [Bacillus anthracis
           str. Sterne]
 gi|164711792|gb|EDR17335.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|167510717|gb|EDR86111.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|167528624|gb|EDR91384.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
 gi|170126465|gb|EDS95352.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|170666901|gb|EDT17666.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|172080514|gb|EDT65599.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|190560046|gb|EDV14028.1| putative ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195990774|gb|EDX54748.1| putative ABC transporter, permease protein [Bacillus cereus W]
 gi|227006543|gb|ACP16286.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
 gi|228662960|gb|EEL18553.1| ABC transporter, permease [Bacillus cereus 95/8201]
 gi|228815145|gb|EEM61395.1| ABC transporter, permease [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228827454|gb|EEM73202.1| ABC transporter, permease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228833626|gb|EEM79182.1| ABC transporter, permease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229266782|gb|ACQ48419.1| putative ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   IPALTLSSILLTMWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|322384276|ref|ZP_08057985.1| aliphatic sulfonate ABC transporter-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321150924|gb|EFX44350.1| aliphatic sulfonate ABC transporter-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 247

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 67/234 (28%), Gaps = 10/234 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           + +         +L   W   V    I          +    +  +  +      T+   
Sbjct: 2   WRKGWPPVGTVILLLFLWQAAVSWFGIESFMLPGPLQIVTELWDQLPRISGHLSFTLEIT 61

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   I +   I +   +   P +     P   L    P     PL++    +  L    
Sbjct: 62  LIGFAIGTSTGIILACILHLIPGVKQAFYPLLLLSQNIPMIALAPLLMIWFGFGLL---- 117

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++     + I  + + G +               +  + +  +  PG  P   +G 
Sbjct: 118 PKVIVITLVCFFPIAVSAMDGFAQADRSIMNYMKMIGASKLQLFTKVEFPGALPSLFSGV 177

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +   +   ++++E            G+G Y+  +        V + + I+  
Sbjct: 178 KISATYSIMGAVIAEWLGSDK------GIGVYMLLAKSSFRTDRVFVSMFIIVI 225



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+ +P +  ++  + +     +   GI+   +P  +  +  +   +  +  + S T    
Sbjct: 3   RKGWPPVGTVILLLFLWQA-AVSWFGIESFMLPGPLQIVTELWDQLPRISGHLSFTLEIT 61

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      + A +      +     P+L + Q+IP++      +++F      KVI
Sbjct: 62  LIGFAIGTSTGIILACILHLIPGVKQAFYPLLLLSQNIPMIALAPLLMIWFGFGLLPKVI 121

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F I  S +               R +    +    S  Q F  +  P ++P L
Sbjct: 122 VITLVCFFPIAVSAM--------DGFAQADRSIMNYMKMIGASKLQLFTKVEFPGALPSL 173

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
              + +S +      V +E +          GIG Y+ LA        +  +M  ++ 
Sbjct: 174 FSGVKISATYSIMGAVIAEWLG------SDKGIGVYMLLAKSSFRTDRVFVSMFIIVI 225


>gi|289565141|ref|ZP_06445594.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium D344SRF]
 gi|289163148|gb|EFD10995.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecium D344SRF]
          Length = 324

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 72/171 (42%), Gaps = 15/171 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            AA  +++  VL+ I  ++Q+IP L  L   + +             + A+ A+    + 
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIG--------TVPALIALVIYALL 94

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  L  I   +EE + +F +S  ++   + +P ++P ++  +  ++        
Sbjct: 95  PIFQNTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTAT 154

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            + +I  G       G+G++I L I     +  L   ++   +  ++  L+
Sbjct: 155 LAALIGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           W      ++  +     +L   P+     L++  V    +   + L +  +      I  
Sbjct: 43  WAANHKKMAEVLLQITGVLQTIPSLALLGLLIPFVGIGTVPALIALVIYALL----PIFQ 98

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      +E A +F ++  R    + LP   P  ++G  TA       + ++ +
Sbjct: 99  NTYIGLAEIDPSIEEAAVAFGMSRMRRLLKVELPIALPVIISGIRTALVLIIGTATLAAL 158

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G       GLG +I    ++ +    ++G +      +  +  +
Sbjct: 159 IGAG-------GLGTFILLGIDRNTPVLTLIGAISSALLAIIFSGLI 198


>gi|57865716|ref|YP_189905.1| amino acid ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|57636374|gb|AAW53162.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
          Length = 211

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           + A+VI+++       L +K  +L  V + I  ++Q+IP L
Sbjct: 5   ISEHSGMLFAKTFEHLYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIASVLQTIPTL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F           +  AI A+F   +  +  +    + NI  +L E  RS  
Sbjct: 65  AVLALMIPLFGVG--------KTPAIIALFLYVLLPILNNTIIGIQNIDSNLREAGRSMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++P ++  + +S      +   +  +  G       G+G +I   +
Sbjct: 117 MTNFQLMKDVELPLALPLILSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   I+ A + +  +  + D +L
Sbjct: 170 ALFEPSMIITATILVTAIALIVDYVL 195



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +V ++IA I+ +P+GI +  +  +S      A +L   P      L++        
Sbjct: 20  LYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIASVLQTIPTLAVLALMIPLFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L ++      IL N I G     ++ +E   S  +T ++  + + LP   P  
Sbjct: 80  PAIIALFLYVLL----PILNNTIIGIQNIDSNLREAGRSMGMTNFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG +I           ++   +++    
Sbjct: 136 LSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLALFEPSMIITATILVTAIA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYVL 195


>gi|330821336|ref|YP_004350198.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327373331|gb|AEA64686.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 238

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 17/203 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFL 116
             L  Y  R  + +  +MV+++          ++          + + +I  ++P L  L
Sbjct: 36  GDLVYYTGRHLMLVGCSMVLAIAVGIPAGVALSRPALARQAERFMQVFNIGNTVPSLAVL 95

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F           ++ AI A+F + +  +T + Y+ + N+P  L E +R   ++ 
Sbjct: 96  AIALGIFGIG--------DMPAIVALFLASLLPITRNAYEGMRNVPASLREAARGIGMTP 147

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ    + +P ++P +V  +  +++        + +I           +G+ I   I   
Sbjct: 148 WQSLTRVELPNALPIIVGGVRTALAINVGTAPLAYLIGADS-------LGTLIFPGIYLD 200

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           +   +L    +   +  L D ++
Sbjct: 201 NQQMLLLGAASTAVLALLLDAIV 223



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 77/237 (32%), Gaps = 18/237 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               + +    ++  +  G    +IG        Q    +++     +  V   +++A  
Sbjct: 2   TRRTVRLAGSLLLAVILFGWIASAIG---ADTWRQHSGDLVYYTGRHLMLVGCSMVLAIA 58

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + IP G+ +  RP ++ + + F Q+       P+     + +       +       + +
Sbjct: 59  VGIPAGVAL-SRPALARQAERFMQVFNIGNTVPSLAVLAIALGIFGIGDM----PAIVAL 113

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              +   I  N   G    P   +E A    +T W+    + LP   P  V G  TA   
Sbjct: 114 FLASLLPITRNAYEGMRNVPASLREAARGIGMTPWQSLTRVELPNALPIIVGGVRTALAI 173

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               + ++         +    LG  I       +   ++LG        L L+  +
Sbjct: 174 NVGTAPLA-------YLIGADSLGTLIFPGIYLDNQQMLLLGAASTAVLALLLDAIV 223


>gi|167894390|ref|ZP_02481792.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
          Length = 271

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 64  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 123

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 124 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 175

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 176 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 233

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 234 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 264



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 83/274 (30%), Gaps = 9/274 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             + +L   LGV R    +   +      +    +I    V   + +     +     + 
Sbjct: 1   APLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAHG 60

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               ++   I +    + R      +   +   +             +     +    P+
Sbjct: 61  VANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPS 117

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               PL +        +    L  +++    W +  +  AG  A P   + V  ++ +TG
Sbjct: 118 IALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTG 173

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            R    I++P   P  + G   A   AW   I +E+             G YI ++  + 
Sbjct: 174 VRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNEL 231

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
               V  G+  +    L +   ++  L     + 
Sbjct: 232 YTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 265


>gi|56964794|ref|YP_176525.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
 gi|56911037|dbj|BAD65564.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
          Length = 213

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 74/190 (38%), Gaps = 19/190 (10%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L            +A+++ +L +        +  R+   L+ ++ I+Q++P L  L F
Sbjct: 10  HDLLFKTGEHLFISFTAILLGVLVSVPLGIALTRVPRVADRLISVIGILQTVPSLAILAF 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ AI A+F   V  +  + Y  +  +   + E  +   ++  +
Sbjct: 70  FIPIFGAG--------KVPAIIALFFYSVLPILRNTYTGVKGVNPSVLEAGKGMGMNNIE 121

Query: 179 KFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
             + + +P ++P ++  + ++     GW  + A    V G       G+G +I   +   
Sbjct: 122 SIFKIEIPLALPVIMAGIRLATVYLIGWATLAA---FVGGG------GLGDFIFDGLNLF 172

Query: 237 DLLAILYAML 246
               I+   L
Sbjct: 173 QPALIIAGTL 182



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 11/174 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F     I++  ++ +P+GI +   P ++ ++     +L   P+       +        
Sbjct: 20  LFISFTAILLGVLVSVPLGIALTRVPRVADRLISVIGILQTVPSLAILAFFIPIFGAG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G         E      +        I +P   P  
Sbjct: 78  --KVPAIIALFFYSVLPILRNTYTGVKGVNPSVLEAGKGMGMNNIESIFKIEIPLALPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           + G   A       + ++     G       GLG +I +         ++ G L
Sbjct: 136 MAGIRLATVYLIGWATLAAFVGGG-------GLGDFIFDGLNLFQPALIIAGTL 182


>gi|56421392|ref|YP_148710.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
           [Geobacillus kaustophilus HTA426]
 gi|56381234|dbj|BAD77142.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter (permease)
           [Geobacillus kaustophilus HTA426]
          Length = 269

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 81/227 (35%), Gaps = 14/227 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I  +    +  HSL  +   T    L    I      +   L     RL   L P
Sbjct: 56  SSPSAIAKLFVEKMSDHSLFAHTWATLFETLLGFFIGTAGGALIGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   V    + +I              +Y +   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIVAMGVVISIIITTIV--------VYSAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V R+F  + +Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 PNYLKVLRTFGATRYQCFQEAVLPASFPAIISTLKVNVGLAWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  I    +  +   +L ++L +  +  +  QL+      W N+
Sbjct: 222 QGLGYLIIYGFQVFNFTLVLMSLLIVALLSTVMYQLVALIEKKWGNR 268



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+F  ++   I +     +G  + + P ++  + P+  +  A P     P+++  +   
Sbjct: 80  ATLFETLLGFFIGTAGGALIGALLWWFPRLAKTLDPYLVVFNAMPKVALGPILIVALGPG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +  + +  +       V +       ++ +V  +F  T ++ ++  +LP  FP
Sbjct: 140 FTS----IVAMGVVISIIITTIVVYSAFQEVDPNYLKVLRTFGATRYQCFQEAVLPASFP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G AW   I  E        +   GLG  I    +  +F  V++ +LI+  
Sbjct: 196 AIISTLKVNVGLAWVGVITGEFL------VSKQGLGYLIIYGFQVFNFTLVLMSLLIVAL 249

Query: 565 FVLALNRFL 573
               + + +
Sbjct: 250 LSTVMYQLV 258


>gi|159046710|ref|YP_001542378.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157914469|gb|ABV95897.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 251

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 15/238 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  +  F++V  I   ++           I+  +   +    L    S++   ++  + +
Sbjct: 14  LIGVAVFLVVWEITAQIIDRSLVLPPVTAILAALWDLILSGELIVALSQSIFLLIVGLFV 73

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + +  FV   L A+SR    +L P L  +   P +  +   +V+F   +PG+VI   LAA
Sbjct: 74  ATVIGFVLGALIARSRTAYWMLNPYLSALFVTPTIALVPLVLVWFGFGFPGRVIVVVLAA 133

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMM 197
           +          + FS+   L + P DL +V+RSF + G     + + +  ++P L+  + 
Sbjct: 134 VV--------PILFSVASGLRDSPGDLIDVARSFGVKGEIALLFKVRIRAALPVLLAGLR 185

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++   G   +  +E      T + L GIG  I           +  ++L +  +    
Sbjct: 186 LAAGRGVVGMAVAE------TYLRLGGIGGLIKSYGAMFQTDYVFASILPLSLLGIAM 237



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 87/244 (35%), Gaps = 17/244 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------T 386
           +     R   ++ +  F VV  +   I  +S+           +  +I  G +      +
Sbjct: 4   RTRKQVRRDQLIGVAVFLVVWEITAQIIDRSLVLPPVTAILAALWDLILSGELIVALSQS 63

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F ++V + +A++I   +G  I         + P+   L   P     PLV+    +   
Sbjct: 64  IFLLIVGLFVATVIGFVLGALIARSRTAYWMLNPYLSALFVTPTIALVPLVLVWFGFGFP 123

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPY 505
              + + L  +      ILF+V +G    P D  +VA SF + G       + +    P 
Sbjct: 124 GRVIVVVLAAVV----PILFSVASGLRDSPGDLIDVARSFGVKGEIALLFKVRIRAALPV 179

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G   A G       V+E       +LR  G+G  I           V   +L +   
Sbjct: 180 LLAGLRLAAGRGVVGMAVAE------TYLRLGGIGGLIKSYGAMFQTDYVFASILPLSLL 233

Query: 566 VLAL 569
            +A+
Sbjct: 234 GIAM 237


>gi|228937994|ref|ZP_04100615.1| ABC transporter, permease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970871|ref|ZP_04131508.1| ABC transporter, permease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977475|ref|ZP_04137867.1| ABC transporter, permease [Bacillus thuringiensis Bt407]
 gi|228782119|gb|EEM30305.1| ABC transporter, permease [Bacillus thuringiensis Bt407]
 gi|228788680|gb|EEM36622.1| ABC transporter, permease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821620|gb|EEM67624.1| ABC transporter, permease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938500|gb|AEA14396.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVLI 236



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVVLI 236


>gi|222094480|ref|YP_002528540.1| ABC transporter , permease protein, putative [Bacillus cereus Q1]
 gi|229137528|ref|ZP_04266135.1| ABC transporter, permease [Bacillus cereus BDRD-ST26]
 gi|221238538|gb|ACM11248.1| ABC transporter, permease protein, putative [Bacillus cereus Q1]
 gi|228645888|gb|EEL02115.1| ABC transporter, permease [Bacillus cereus BDRD-ST26]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+++ L   T++ V++ 
Sbjct: 8   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFMVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVLI 236



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVVLI 236


>gi|190894844|ref|YP_001985137.1| putative ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700505|gb|ACE94587.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 293

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLVAEYIM 274



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V  + +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLVAEYIMTLVENRLAKWRPQQHLDT 292


>gi|167824274|ref|ZP_02455745.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
          Length = 273

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 66  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 126 ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 178 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 235

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 236 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 266



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 2   AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 61

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 62  GVANGELPAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 118

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 119 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 174

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 175 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 232

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 233 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 267


>gi|163851234|ref|YP_001639277.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163662839|gb|ABY30206.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 244

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +   +       SL      T  R+  + VI++    +      +SR    +
Sbjct: 27  RTLPAPSAVFAFILREAQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRL 86

Query: 100 LV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L  P+L ++ + P L       V+            E AAI A+  +++ N+   M +  
Sbjct: 87  LDTPLLVVLNT-PALVITVLAYVWLGL--------TETAAIVAVALNKLPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   LEE++ ++R        ++ +P   P +V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLEEMATTYRFDRRTWIAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I       D+ A++   L  + V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVMLALDSLLLQPLDAHVRRWR 244



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                + +   +T+ RV V  +IA  + + +GI +G        +     ++   PA V 
Sbjct: 43  AQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            + +       +   +  GA       +E+A+++      W
Sbjct: 103 TVLAYVWLGLTET----AAIVAVALNKLPNVAVIMREGARGLDPGLEEMATTYRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LP + P+ V  A +    AW   +V E+        R  G+G  I          
Sbjct: 159 IAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG------RPNGVGFAINYYFTLFDVT 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            V+   L+    +LAL+  L  PL  +  R
Sbjct: 213 AVIGYSLVFMSVMLALDSLLLQPLDAHVRR 242


>gi|34496651|ref|NP_900866.1| binding-protein-dependent transport system [Chromobacterium
           violaceum ATCC 12472]
 gi|34102506|gb|AAQ58871.1| probable binding-protein-dependent transport system
           [Chromobacterium violaceum ATCC 12472]
          Length = 220

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +    +  A+ ++++          +       ++ +  ++ +IP +      +  F 
Sbjct: 23  AGQHLTLVGVAVSLAVVLGVPLGIAIVRFPAAADAVLSLATVLLTIPAIALFGLMIPLFS 82

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +  G      + A+ A F   +  +  + + +L  +   + E  R   L+ WQ+  ++ 
Sbjct: 83  LIGHGI---GAVPAVTAAFLYSLLPIVRNAHAALTQLEPGVREAGRGIGLTFWQRLRWVE 139

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   +  +       VV +  ++    ++   G+G+ I   I + D+  ++  
Sbjct: 140 LPLAVPVIFGGIRTA-------VVLNIGVMAIAAIVGAGGLGTLILHGISQSDIRKLIAG 192

Query: 245 MLTMLGVIFLYDQLLFR 261
            L +  +    D LL R
Sbjct: 193 ALAVSLLAVAMDWLLLR 209



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++ Y+  L    +  V V + +A ++ +P+GI I   P  +  +   A +L   PA  
Sbjct: 13  LANLSYIGALAGQHLTLVGVAVSLAVVLGVPLGIAIVRFPAAADAVLSLATVLLTIPAIA 72

Query: 433 FFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F L++   S   H    +         +   I+ N  A  +      +E      +T W
Sbjct: 73  LFGLMIPLFSLIGHGIGAVPAVTAAFLYSLLPIVRNAHAALTQLEPGVREAGRGIGLTFW 132

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R++ LP   P    G  TA         ++ +   G       GLG  I     +  
Sbjct: 133 QRLRWVELPLAVPVIFGGIRTAVVLNIGVMAIAAIVGAG-------GLGTLILHGISQSD 185

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             +++ G L +    +A++  L         + +R
Sbjct: 186 IRKLIAGALAVSLLAVAMDWLLLRAQRALTPKGIR 220


>gi|312278642|gb|ADQ63299.1| Proline/glycine betaine ABC transporter substrate-binding protein
           [Streptococcus thermophilus ND03]
          Length = 187

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           +IA +I  P+G     +P +      F Q L   P+     +++  +    L   + L  
Sbjct: 1   MIALVIGFPLGYLSYSKPKLRQAASFFTQGLRVIPSLGLLFILIPFIGVGRLPAIIALVF 60

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L I      IL N I G +  P    E A+   +T W+    + LP   P+ + G   A 
Sbjct: 61  LAIP----PILLNTIVGFNEVPQSLIETATGLGMTKWQKLYKVSLPLASPHILNGIKLAL 116

Query: 515 G-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +A++ + + + G   +  TGLG Y  +    G     +L  + M  F L ++R 
Sbjct: 117 IEVIASATLATYIGAGGLGTIIFTGLGLYRYDLLIIGGGSVALLSFISMILFDLLISRL 175



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 19/201 (9%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I+L+  F    L+    +L          ++ IP LG L   + +             L
Sbjct: 1   MIALVIGFPLGYLSYSKPKLRQAASFFTQGLRVIPSLGLLFILIPFIGVG--------RL 52

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            AI A+    +  +  +       +P+ L E +    ++ WQK + + +P + P ++  +
Sbjct: 53  PAIIALVFLAIPPILLNTIVGFNEVPQSLIETATGLGMTKWQKLYKVSLPLASPHILNGI 112

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVI-- 252
            +++      V+AS  +    T I   G+G+ I   +     DLL I    + +L  I  
Sbjct: 113 KLAL----IEVIASATLA---TYIGAGGLGTIIFTGLGLYRYDLLIIGGGSVALLSFISM 165

Query: 253 FLYDQLLFRPMIVWSNKFRLE 273
            L+D L+ R  I    K   E
Sbjct: 166 ILFDLLISRLPIEKHKKRSYE 186


>gi|163746782|ref|ZP_02154139.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161379896|gb|EDQ04308.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 250

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 103/261 (39%), Gaps = 16/261 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           PF   R++         + +  ++  L  G+    +P   + +  +  +   L Q A  +
Sbjct: 2   PFAGHRVWRGAVSFALAMAIWQLVVTLS-GVPRFILPGPWLVLQALGANAALLWQNALWS 60

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +   + + ++     A L   SRR   +L P+L + Q++P+        ++     P
Sbjct: 61  AGNLALGLGVGIILGVETAVLLTLSRRARWLLRPMLVVAQAVPVFALAPVITLWLGYGMP 120

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        I  I     + +  +++  L  +P  L ++SR    S W++   L +P +
Sbjct: 121 SK--------IVTIALVTYFPIASALFDRLMALPPGLSDLSRLAGASRWRETLLLRLPHA 172

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +PGL+  + +++  G   V+  E +          G+G  + +A        +  A++ +
Sbjct: 173 VPGLISGLRLAVVYGPLAVLIGEWVGSS------RGLGHLMLMANGRGQTALMFAALVVL 226

Query: 249 LGVIFLYDQLLFRPMIVWSNK 269
             +  +   ++   +  W+ +
Sbjct: 227 AALSLVL-WVVVEALARWAAR 246



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 83/257 (32%), Gaps = 11/257 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P    ++        +    W  VV    +        ++V      +   +      + 
Sbjct: 2   PFAGHRVWRGAVSFALAMAIWQLVVTLSGVPRFILPGPWLVLQALGANAALLWQNALWSA 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             + + + +  I+ +   + +         ++P   +  A P     P++   + Y   +
Sbjct: 62  GNLALGLGVGIILGVETAVLLTLSRRARWLLRPMLVVAQAVPVFALAPVITLWLGYGMPS 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + ++L+    T + I   +     A P    +++     + WR    + LP   P  +
Sbjct: 122 KIVTIALV----TYFPIASALFDRLMALPPGLSDLSRLAGASRWRETLLLRLPHAVPGLI 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   A      A ++ E          + GLG  +  +  +G    +   ++++    L
Sbjct: 178 SGLRLAVVYGPLAVLIGEWVG------SSRGLGHLMLMANGRGQTALMFAALVVLAALSL 231

Query: 568 ALNRFLWHPLYLYGTRC 584
            L   +   L  +  R 
Sbjct: 232 VLWVVV-EALARWAARR 247


>gi|332359527|gb|EGJ37346.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1056]
          Length = 266

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 35  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 94

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 95  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 150

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 151 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 210

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 211 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 255



 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 95/242 (39%), Gaps = 16/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 25  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 83

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 84  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 138 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 195

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 196 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIILVSVIS 248

Query: 254 LY 255
           L 
Sbjct: 249 LL 250


>gi|229015764|ref|ZP_04172743.1| ABC transporter, permease protein [Bacillus cereus AH1273]
 gi|229021970|ref|ZP_04178530.1| ABC transporter, permease protein [Bacillus cereus AH1272]
 gi|228739345|gb|EEL89781.1| ABC transporter, permease protein [Bacillus cereus AH1272]
 gi|228745521|gb|EEL95544.1| ABC transporter, permease protein [Bacillus cereus AH1273]
          Length = 213

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A I+   + I +   P     + P   +    P  V  PL +    Y  
Sbjct: 18  TLQEVIIGLFFAIILGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFIIWFGYG- 76

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 77  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQIYQKVKFPAVLPY 133

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 134 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 186

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 187 VTLCLYFI 194



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  +++     A +        +++ P+L I Q+IPI+      +
Sbjct: 11  LLPNTVQTLQEVIIGLFFAIILGTSIAIIMDVIPLFRILMNPLLVISQTIPIVVLAPLFI 70

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 71  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQIY 122

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 123 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 175

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 176 RVFGVAAIIVMVTLCLYFI 194


>gi|223986521|ref|ZP_03636520.1| hypothetical protein HOLDEFILI_03835 [Holdemania filiformis DSM
           12042]
 gi|223961517|gb|EEF66030.1| hypothetical protein HOLDEFILI_03835 [Holdemania filiformis DSM
           12042]
          Length = 212

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q        +L  + +  +   +   L ++  ++   ++P+L + Q+IP + F+  
Sbjct: 10  ADLIQAIITHLYYVLIPVALGFVIAVILGVLLSRVPKISGYILPVLSVFQTIPGIVFVGI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +Y                + A+    V+ +  + Y  L N+   ++E +R   +S  Q
Sbjct: 70  LFLYVGM--------VPATVLIALTIYAVFPILKNTYVGLLNVDEKVKEAARGCGMSPLQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +MP +   + +S      + V + MI +G       G+G +I   +   + 
Sbjct: 122 ILIKIELPLAMPNIFVGLRLSTIYTVSWAVLAAMIGLG-------GLGDFIYRGVGTNNN 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           + IL   +    +      L+
Sbjct: 175 MLILTGAIPAAILALSLGALV 195



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++ V++ + +  +I + +G+ +   P IS  I P   +    P  VF  ++   V     
Sbjct: 20  LYYVLIPVALGFVIAVILGVLLSRVPKISGYILPVLSVFQTIPGIVFVGILFLYVGMVPA 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L++       + IL N   G        KE A    ++  +    I LP   P  
Sbjct: 80  TVLIALTIY----AVFPILKNTYVGLLNVDEKVKEAARGCGMSPLQILIKIELPLAMPNI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   +     + ++++ +   G       GLG +I       +   ++ G +      
Sbjct: 136 FVGLRLSTIYTVSWAVLAAMIGLG-------GLGDFIYRGVGTNNNMLILTGAIPAAILA 188

Query: 567 LALNRFL 573
           L+L   +
Sbjct: 189 LSLGALV 195


>gi|330957829|gb|EGH58089.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 271

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P    R I     F LL F   +G    L     +  +P      D V  V  
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAMQMADAVKRVAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           T D  +    L Q ++ +  R+   + IS L        A         L P+L ++  +
Sbjct: 61  TADARTGDYLLWQDSASSLKRLAIGLGISALLGLCLGIAAGILPLFSAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   + W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGATTWTLILRVILPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P  S+ + P   +L+  P     P++     
Sbjct: 75  SASSLKRLAIGLGISALLGLCLGIAAGILPLFSAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   T W     +ILP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGATTWTLILRVILPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|28378308|ref|NP_785200.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254556515|ref|YP_003062932.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
 gi|308180458|ref|YP_003924586.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271143|emb|CAD64048.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254045442|gb|ACT62235.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
 gi|308045949|gb|ADN98492.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 209

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++ + ++       L  + + +  V++ I  ++Q+IP +  L   + +F           
Sbjct: 26  SLFLGIIVAVPIGILLTRVKPIANVVMSIASMLQTIPAMALLALMIPFFGIG-------- 77

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + AI A+F   +  +  + Y  L ++   L + ++   ++GWQ    + +P + P ++ 
Sbjct: 78  AIPAIIALFIYSLLPILRNTYLGLEDVDPALIDAAKGMGMTGWQSIVKVELPMAAPVIMA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S +    +V+A   +    + I   G+G +I   +       IL   + ++ +  +
Sbjct: 138 GIRLSAT----YVIAWAALA---SYIGAGGLGDFIFNGLNLYRTDLILGGSIPVIILALI 190

Query: 255 YDQLLFR 261
            D LL +
Sbjct: 191 VDWLLGK 197



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +  I+ +P+GI +     I++ +   A +L   PA     L++        
Sbjct: 20  LYISAFSLFLGIIVAVPIGILLTRVKPIANVVMSIASMLQTIPAMALLALMIPFFGIGA- 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G         + A    +TGW+    + LP   P  
Sbjct: 79  ---IPAIIALFIYSLLPILRNTYLGLEDVDPALIDAAKGMGMTGWQSIVKVELPMAAPVI 135

Query: 507 VTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + G   +     AW A            ++   GLG +I           ++ G + +  
Sbjct: 136 MAGIRLSATYVIAWAAL---------ASYIGAGGLGDFIFNGLNLYRTDLILGGSIPVII 186

Query: 565 FVLALNRFL 573
             L ++  L
Sbjct: 187 LALIVDWLL 195


>gi|320527072|ref|ZP_08028261.1| ABC transporter, permease protein [Solobacterium moorei F0204]
 gi|320132657|gb|EFW25198.1| ABC transporter, permease protein [Solobacterium moorei F0204]
          Length = 256

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 12/189 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  + +  ++A I+ I + I+          + P    + + P   F  LV+  V    
Sbjct: 63  SLVNISLGFVLAMIVGILMAIFAAKYNWFKQLLAPLVFTVKSIPVASFIILVLIWV---- 118

Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              +  LS+++ F   + I + NV  G   + +   E+A  F ++ +   RYI    I P
Sbjct: 119 --HSAQLSIVISFLMVFPIFYENVRKGIEMYNHQLLEMADVFELSNFARIRYIYTSSILP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A G AW + I +EV            +G ++ ++       ++    L++  
Sbjct: 177 YFQSACSLALGLAWKSGIAAEVIGLPKFS-----IGEHLQQAKVYFDTADLFAWTLVIII 231

Query: 565 FVLALNRFL 573
               L + +
Sbjct: 232 LSTVLEKLV 240



 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 98/241 (40%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I+ +L ++LV    +++L+       P  ++  +   L      Q   R+ + +    V+
Sbjct: 14  IWTMLFWLLVWQASSVILNQEILLVSPFTVILRLTELLKTVDFYQSILRSLVNISLGFVL 73

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   + A  AAK      +L P++  ++SIP+  F+   +++  +            +
Sbjct: 74  AMIVGILMAIFAAKYNWFKQLLAPLVFTVKSIPVASFIILVLIWVHSAQ---------LS 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F         ++ + +      L E++  F LS + +  Y+     +P       +
Sbjct: 125 IVISFLMVFPIFYENVRKGIEMYNHQLLEMADVFELSNFARIRYIYTSSILPYFQSACSL 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W   +A+E+I +     P   IG ++  A    D   +    L ++ +  + ++L
Sbjct: 185 ALGLAWKSGIAAEVIGL-----PKFSIGEHLQQAKVYFDTADLFAWTLVIIILSTVLEKL 239

Query: 259 L 259
           +
Sbjct: 240 V 240


>gi|299536172|ref|ZP_07049486.1| ABC transporter permease [Lysinibacillus fusiformis ZC1]
 gi|298728447|gb|EFI69008.1| ABC transporter permease [Lysinibacillus fusiformis ZC1]
          Length = 257

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   + +  +I                +    I      LP +A  T    L  + I + 
Sbjct: 14  IAFLLFIWELIVRFAEVPHWLLPAPSSILSEAIQSYQTFLP-HAFATVQLALLGLAIGIA 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +  +   +  +  PIL + Q++PIL      +++F      K+I   L   F 
Sbjct: 73  CGLTVAVVLHRFNFIRELFYPILIMSQNVPILVLAPLLIIWFGFGLLPKLIIICLVCFFP 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  + +                 L+        +  Q FW L  P++ P +   + ++ +
Sbjct: 133 IVIAAM--------DGFRQTAPALKHYFDMVGATKAQTFWKLEWPYAYPAIFSGIKIAAT 184

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E +          GIG Y+ LA        +  A+  ++ +  L 
Sbjct: 185 YSVMGAVIAEWLGAKK------GIGVYMTLAQSSFRTDRVFVAIFAIVLLSLLL 232



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +     T+   ++ + I     + V + +     I     P   +    P  V  PL++
Sbjct: 52  FLPHAFATVQLALLGLAIGIACGLTVAVVLHRFNFIRELFYPILIMSQNVPILVLAPLLI 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +  L       +++     + I+   + G        K        T  + +  + 
Sbjct: 112 IWFGFGLL----PKLIIICLVCFFPIVIAAMDGFRQTAPALKHYFDMVGATKAQTFWKLE 167

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P  +P   +G   A   +   ++++E            G+G Y+  +        V + 
Sbjct: 168 WPYAYPAIFSGIKIAATYSVMGAVIAEWLG------AKKGIGVYMTLAQSSFRTDRVFVA 221

Query: 559 VLIMCCFVLAL 569
           +  +    L L
Sbjct: 222 IFAIVLLSLLL 232


>gi|218661672|ref|ZP_03517602.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli IE4771]
          Length = 282

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +     F+    +  + L GI+ + +P     +    L+  +L      T    L
Sbjct: 31  RAIPALLAGFVFLAAWEL-YVDLSGIKPSILPAPSRILTQGWLNREALIANTWPTLGATL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F FV + L      +   L+PI    Q++P++      V++F          
Sbjct: 90  GGFALSLAFAFVSSILMDFMPSMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL------ 143

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q      RD+ E+  S + S W+ F    +P S+P   
Sbjct: 144 --LPKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPYFF 201

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             + +S++      + +E            G+G YI  A       
Sbjct: 202 AGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNNFRPD 241



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 84  TLGATLGGFALSLAFAFVSSILMDFMPSMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R   LP   PY
Sbjct: 144 L----PKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPY 199

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           +  G   +   A   +I +E A          GLG YI  +   
Sbjct: 200 FFAGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNN 237


>gi|116249332|ref|YP_765173.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253982|emb|CAK12378.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 293

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLFAEYIM 274



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 80/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V    +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDT 292


>gi|330826191|ref|YP_004389494.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329311563|gb|AEB85978.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 268

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 99/254 (38%), Gaps = 21/254 (8%)

Query: 20  FDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           +   A +L+   +  L   L+G      P D +  +   +         + T  R L+ +
Sbjct: 19  WGAAASLLLFVALWELGAGLYGPLILPTPLDTLATLRGLVRAGEAWPELAITARRALTGL 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++         LA  S    M+  P + ++  +P + +L   +++F             
Sbjct: 79  LLAAGVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLAMLWFGAGDGTP------ 132

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +F +F + +  +     Q    +   L++++R++RL    + + L +P     L    
Sbjct: 133 --VFTVFVACLPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLFDLYLPHVAAYLFPAW 190

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA----ILYAMLTMLGVI 252
           + ++   W   V +E++   D      G+G+ +A+     D  A    I   + ++L + 
Sbjct: 191 ITALGSSWKVAVMAELLATSD------GVGAALAVTRSHLDTSASLAWICAVVGSLLVLE 244

Query: 253 FLYDQLLFRPMIVW 266
           +   +L+ R +  W
Sbjct: 245 YALLELVKRELERW 258



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 79/256 (30%), Gaps = 10/256 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           + L  +    P              +    W          I    +  +          
Sbjct: 2   KLLWRLLRGMPAYLWSGWGAAASLLLFVALWELGAGLYGPLILPTPLDTLATLRGLVRAG 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                  IT  R +  +++A+ +   +G+  G     S   +P+  LL   P   +  L 
Sbjct: 62  EAWPELAITARRALTGLLLAAGVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLA 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +         P       +       +    + G     +  K++A ++ +        +
Sbjct: 122 MLWFGAGDGTP----VFTVFVACLPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLFDL 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP +  Y     ITA G +W  ++++E+ +       + G+GA +A +         + 
Sbjct: 178 YLPHVAAYLFPAWITALGSSWKVAVMAELLA------TSDGVGAALAVTRSHLDTSASLA 231

Query: 558 GVLIMCCFVLALNRFL 573
            +  +   +L L   L
Sbjct: 232 WICAVVGSLLVLEYAL 247


>gi|228995748|ref|ZP_04155409.1| ABC transporter, permease protein [Bacillus mycoides Rock3-17]
 gi|228763992|gb|EEM12878.1| ABC transporter, permease protein [Bacillus mycoides Rock3-17]
          Length = 207

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMRATKWQIYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  G+  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GIAAIIVM 180

Query: 566 VLALNRFL 573
           V  L  F+
Sbjct: 181 VTMLLYFI 188



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ R + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMRATKWQIY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ +    +
Sbjct: 170 RVFGIAAIIVMVTMLLYFI 188


>gi|257126380|ref|YP_003164494.1| binding-protein-dependent transporters inner membrane component
           [Leptotrichia buccalis C-1013-b]
 gi|257050319|gb|ACV39503.1| binding-protein-dependent transport systems inner membrane
           component [Leptotrichia buccalis C-1013-b]
          Length = 251

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 94/249 (37%), Gaps = 16/249 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I+ +I P+I  +   +++  I++++    +    P     +     D   L ++   T L
Sbjct: 7   ITDKIAPSII-IAVLLMIWQILSMVNIIPKFML-PSPFEVVKAFVYDFPLLMEHTKITLL 64

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
                + + ++  F  A +  +      ++ P+L I Q+IP +      V++        
Sbjct: 65  EAFLGLGLGIILGFAVAVVMDRFEYAYKMIYPVLVITQTIPTVAIAPLLVLWLGYGI--- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +T  +     +  +D+  + ++   + +Q F ++ +P S+ 
Sbjct: 122 -----LPKITLIVMTSFFPITIGLLDGFRSADKDMLNLLKTMGATPFQNFIHVKLPGSLG 176

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                + +S+S      V +E +          G+G Y+    K      +   +  +  
Sbjct: 177 YFFAGLRISVSYSIIGAVVAEWLGG------FSGLGVYMTRVRKSYSFDKMFAVIFLISA 230

Query: 251 VIFLYDQLL 259
           +  L   L+
Sbjct: 231 ISLLLMYLV 239



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +L + W  +     I        + V      D   ++    IT+    + + +  I
Sbjct: 16  IIAVLLMIWQILSMVNIIPKFMLPSPFEVVKAFVYDFPLLMEHTKITLLEAFLGLGLGII 75

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   V + +    +    I P   +    P     PL+V  + Y      L    L++  
Sbjct: 76  LGFAVAVVMDRFEYAYKMIYPVLVITQTIPTVAIAPLLVLWLGYG----ILPKITLIVMT 131

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + I   ++ G  +   D   +  +   T ++ + ++ LPG   Y+  G   +   +  
Sbjct: 132 SFFPITIGLLDGFRSADKDMLNLLKTMGATPFQNFIHVKLPGSLGYFFAGLRISVSYSII 191

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++V+E           +GLG Y+    +  SF ++   + ++    L L   +
Sbjct: 192 GAVVAEWLGG------FSGLGVYMTRVRKSYSFDKMFAVIFLISAISLLLMYLV 239


>gi|90419703|ref|ZP_01227612.1| putative permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335744|gb|EAS49492.1| putative permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 288

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 19/227 (8%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I       +   SL   A  TTL  +   ++              S  +  ++ P 
Sbjct: 66  QPSGIFANFARFIMDGSLFVDAGYTTLEAVVGFILGTTIGTSLGLSLWYSGGVARLVEPF 125

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKV-IGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  + S+P +      +++F   Y  K+ +   + AI A+ T+         YQ+  +  
Sbjct: 126 VIALNSVPKIALAPLIILWFGTGYTSKIALVVAMTAIVALITA---------YQAARDSD 176

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +DL+ +  S      + F+   VP S+P ++    +++       V  E I         
Sbjct: 177 KDLQRLLTSMGADKHRIFFKAVVPSSLPAVIATFRINIGFALVGAVVGEFIS------SQ 230

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
            G+G  +  A    DL  +   + +++ + F        + R ++ W
Sbjct: 231 HGLGHLVFTASNLYDLNTVWVGLFSLMILGFALYHIVNFIERRVLPW 277



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T    VV  I+ + I   +G+ + +   ++  ++PF   L + P     PL
Sbjct: 81  GSLFVDAGYTTLEAVVGFILGTTIGTSLGLSLWYSGGVARLVEPFVIALNSVPKIALAPL 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++      + +    +  +         L      A     D + + +S      R +  
Sbjct: 141 IILWFGTGYTSKIALVVAMTAIVA----LITAYQAARDSDKDLQRLLTSMGADKHRIFFK 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ++P   P  +       G A   ++V E  S         GLG  +  ++       V 
Sbjct: 197 AVVPSSLPAVIATFRINIGFALVGAVVGEFIS------SQHGLGHLVFTASNLYDLNTVW 250

Query: 557 LGVLIMCCFVLALNRFL 573
           +G+  +     AL   +
Sbjct: 251 VGLFSLMILGFALYHIV 267


>gi|325275909|ref|ZP_08141756.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324098959|gb|EGB96958.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 237

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 76/194 (39%), Gaps = 23/194 (11%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R    +    A ++++ ++                + I  I      L  Y     +
Sbjct: 1   MAKRYGKGLLGWAAVLVILALLV-------------HWIGIDTIARYRDDLGFYLQAHLV 47

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +L++M  +L          ++  R+      +   ++  +IP L  L   +        
Sbjct: 48  LVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG 107

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P +
Sbjct: 108 P--------AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNA 159

Query: 189 MPGLVWNMMMSMSG 202
           +P +V  + ++++ 
Sbjct: 160 VPIIVGGVRVALAL 173



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 11/171 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  V+  +A+ + W  I  I     Y+D L       + +  V+  +  A  + IP GI 
Sbjct: 12  WAAVLVILALLVHWIGIDTIAR---YRDDLGFYLQAHLVL--VLASMAAALAVGIPAGIA 66

Query: 408 IGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +     +        F  +    P      + +S +              +   +   I+
Sbjct: 67  LSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG----PAIFALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            N   G    P   KE A+   +T  +    + LP   P  V G   A   
Sbjct: 123 RNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALAL 173


>gi|228919577|ref|ZP_04082939.1| ABC transporter, permease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839931|gb|EEM85210.1| ABC transporter, permease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++    +    + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   LPALTLSSILLALWEVGAIIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VAISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|222149439|ref|YP_002550396.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221736422|gb|ACM37385.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 295

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   ITM   ++     SI  + VGI +G    +S     + + + + P  V  P+
Sbjct: 90  GSLWYNLGITMEEALIGFFSGSIAGVVVGIGLGRNKLLSDIFSVYIKAINSIPRVVLAPI 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +     +      +++ F     +  N   G      D    A     + W+  + 
Sbjct: 150 FIMIMGLGLASKVALAFIMVFFV----VFANAFQGVREADQDMIANARILGASDWQVTKA 205

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P    +       + G A   +IV E            G+G  I+ +        + 
Sbjct: 206 VIVPSAMSWIFASLHVSFGFAIIGAIVGEFVG------ARYGIGQLISIAKGTFDAAGMF 259

Query: 557 LGVLIMCCFVLALNRFL 573
             ++++    LA    +
Sbjct: 260 AAIVLVMIITLAAEYVM 276



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +   V      +++ L  +    +  + SIP +     
Sbjct: 90  GSLWYNLGITMEEALIGFFSGSIAGVVVGIGLGRNKLLSDIFSVYIKAINSIPRVVLAPI 149

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++        KV  A +   F +F         + +Q +    +D+   +R    S WQ
Sbjct: 150 FIMIMGLGLASKVALAFIMVFFVVFA--------NAFQGVREADQDMIANARILGASDWQ 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 202 VTKAVIVPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARYGIGQLISIAKGTFDA 255

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A++ ++ +    +    L+   +  W  +  L+ 
Sbjct: 256 AGMFAAIVLVMIITLAAEYVMTLIENRLAKWRPQQSLDT 294


>gi|206977200|ref|ZP_03238098.1| putative ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217958310|ref|YP_002336858.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
 gi|206744516|gb|EDZ55925.1| putative ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217067893|gb|ACJ82143.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
          Length = 251

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+++ L   T++ V++ 
Sbjct: 9   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFMVHLPA-TLYVVLIG 67

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 68  VAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 123

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 124 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 184 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVLI 237



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 56  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 116 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 168 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 221

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 222 PIVLLSLLAIFFVVLI 237


>gi|73541145|ref|YP_295665.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72118558|gb|AAZ60821.1| Binding-protein-dependent transport systems inner membrane
           component:Substrate-binding region of ABC-type glycine
           betaine transport system [Ralstonia eutropha JMP134]
          Length = 493

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  +  A++  +P+GI    R  +   +     +L   P+     +++  +    + P 
Sbjct: 303 VVGAVGAATLAGVPLGIVSARRRRLGQGVLGVVSMLQTVPSLALLAMLIPLLGRIGVWPA 362

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +    L        I+ N   G        ++ A +  +   +  RY+ LP   P  + G
Sbjct: 363 MVALFLY---ALLPIVRNTCTGLQQVSVSMRDAARALGLRDLQVLRYVELPLALPVVLAG 419

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             TA   +   + ++     G       G G  IA          ++ G +
Sbjct: 420 VKTAAIISVGTATIAAFVGAG-------GYGERIATGLALNDTVMLLAGAI 463



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 72/184 (39%), Gaps = 22/184 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R    ++ A+  + L       ++A+ RRLG  ++ ++ ++Q++P L  L   +     +
Sbjct: 298 RHVALVVGAVGAATLAGVPLGIVSARRRRLGQGVLGVVSMLQTVPSLALLAMLIPLLGRI 357

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                      A+ A+F   +  +  +    L  +   + + +R+  L   Q   Y+ +P
Sbjct: 358 G-------VWPAMVALFLYALLPIVRNTCTGLQQVSVSMRDAARALGLRDLQVLRYVELP 410

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQDLLAIL 242
            ++P ++  +             + +I VG   I       G G  IA  +   D + +L
Sbjct: 411 LALPVVLAGVKT-----------AAIISVGTATIAAFVGAGGYGERIATGLALNDTVMLL 459

Query: 243 YAML 246
              +
Sbjct: 460 AGAI 463


>gi|186472047|ref|YP_001859389.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184194379|gb|ACC72343.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 277

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 10/159 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                  + P+       P     PL+V    Y   +      ++      + +L N I 
Sbjct: 104 SALAEKILYPYVIAFQTVPKVAIAPLIVIWFGYGVTSK----VVITATIAFFPVLANTIV 159

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  + P D  ++  +F  + W  +RY+ +P   PY   G   A   A   +IV E     
Sbjct: 160 GLRSAPRDQIDLIVAFTGSKWHIFRYVKVPNALPYIFVGLDVAIVLAVIGAIVGEFVG-- 217

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  GLG  I +         V   +LI+    + L
Sbjct: 218 ----SQAGLGYLILQRNFSMDTAGVFAILLILSLMGIGL 252



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 14/211 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P      +       SL      T    +           +   +  +S     +L P
Sbjct: 54  PTPSSTATSLIQGFSDGSLLSNLGVTFYETMVGFFAGAGLGLLLGGIIGQSALAEKILYP 113

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +   Q++P +      V++F      KV+     A F +          +    L + P
Sbjct: 114 YVIAFQTVPKVAIAPLIVIWFGYGVTSKVVITATIAFFPVLA--------NTIVGLRSAP 165

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           RD  ++  +F  S W  F Y+ VP ++P +   + +++      V+A    +VG+ V   
Sbjct: 166 RDQIDLIVAFTGSKWHIFRYVKVPNALPYIFVGLDVAI------VLAVIGAIVGEFVGSQ 219

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            G+G  I       D   +   +L +  +  
Sbjct: 220 AGLGYLILQRNFSMDTAGVFAILLILSLMGI 250


>gi|222106461|ref|YP_002547252.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221737640|gb|ACM38536.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 251

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++  +++  I IP+ I +   P +S  + P   ++ + P     P+++  +   
Sbjct: 57  ATLRVAMIGYVLSIAIAIPLAIVMMRSPLLSKTLYPLLVVIQSTPVVAVAPIIIVVLGAG 116

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++    T + ++ +   G +A P +  E++ S     +R    I LP   P
Sbjct: 117 DA----PRVVITCLITFFPLVVSTATGLAATPPELIELSRSLRAPAFREITQIRLPFAVP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y  +    +   A   ++V+E  +         G+G +I  ST     P+   G+ ++  
Sbjct: 173 YIFSALKISITLAVIGAVVAEFCA------SEAGVGYFIQFSTSLFKLPQAWAGLFVLAA 226

Query: 565 FVLAL 569
             L L
Sbjct: 227 LSLIL 231



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 16/232 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + +    +      +          I +D   L  +   T    +   V+S+      A 
Sbjct: 21  LAVRLFAVPSYLLPSPSSIFNAFSSIGIDRWGL--HLWATLRVAMIGYVLSIAIAIPLAI 78

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +  +S  L   L P+L ++QS P++      +V        +V+   L   F        
Sbjct: 79  VMMRSPLLSKTLYPLLVVIQSTPVVAVAPIIIVVLGAGDAPRVVITCLITFF-------- 130

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S    L   P +L E+SRS R   +++   + +PF++P +   + +S++      V
Sbjct: 131 PLVVSTATGLAATPPELIELSRSLRAPAFREITQIRLPFAVPYIFSALKISITLAVIGAV 190

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +E            G+G +I  +     L      +  +  +  +  Q + 
Sbjct: 191 VAEFCA------SEAGVGYFIQFSTSLFKLPQAWAGLFVLAALSLILFQAVL 236


>gi|229095376|ref|ZP_04226367.1| ABC transporter, permease [Bacillus cereus Rock3-29]
 gi|228687922|gb|EEL41809.1| ABC transporter, permease [Bacillus cereus Rock3-29]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLVMWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|162453787|ref|YP_001616154.1| ABC transport system permease protein [Sorangium cellulosum 'So ce
           56']
 gi|161164369|emb|CAN95674.1| ABC transport system permease protein [Sorangium cellulosum 'So ce
           56']
          Length = 260

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 12/204 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+     +  +  +L   A  T    L+   +S     + A   A SR L   L 
Sbjct: 37  LPPPSDVARAGAV--NAATLLAGAVTTAKAALAGFFLSAAAGVLAAIALASSRPLERALY 94

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P    +Q++PI+      V++              A   + F   V+ +  +    L ++
Sbjct: 95  PYTVFLQTVPIVAIAPLLVLWCGPGLR--------AVAVSAFIVSVFPVIANTLAGLRSV 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L ++ R +    +     L +P ++P LV  + ++        +  E   V      
Sbjct: 147 EPALRDLFRLYGAGRFATLRKLELPSALPHLVTGLRIAAGLAVIGAIVGEF--VAGFSED 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAM 245
             G+G  +  A ++     +  A+
Sbjct: 205 AAGLGILVLSAYRQLRTDLLFAAV 228



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 74/232 (31%), Gaps = 6/232 (2%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P     +        +L + W  +   +++          V      +   ++     T 
Sbjct: 3   PTPLQAVAPPLAALVILLVLWEALARALSVPAYLLPPPSDVARAGAVNAATLLAGAVTTA 62

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +    +++   +   I +     +   + P+   L   P     PL+V         
Sbjct: 63  KAALAGFFLSAAAGVLAAIALASSRPLERALYPYTVFLQTVPIVAIAPLLVLWCGPGLR- 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +++     + + ++ N +AG  +     +++   +    +   R + LP   P+ V
Sbjct: 122 ---AVAVSAFIVSVFPVIANTLAGLRSVEPALRDLFRLYGAGRFATLRKLELPSALPHLV 178

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           TG   A G A   +IV E  +         GLG  +  +  +     +   V
Sbjct: 179 TGLRIAAGLAVIGAIVGEFVAG--FSEDAAGLGILVLSAYRQLRTDLLFAAV 228


>gi|154151458|ref|YP_001405076.1| phosphate ABC transporter, inner membrane subunit PstA [Candidatus
           Methanoregula boonei 6A8]
 gi|154000010|gb|ABS56433.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanoregula boonei 6A8]
          Length = 604

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 71/485 (14%), Positives = 160/485 (32%), Gaps = 35/485 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           T L  L AMV ++  +   A   ++  S R+  +L P  +++  IP + +  F ++   N
Sbjct: 41  TLLVTLGAMVFAVPLSLGCAIYISELASPRIKNILKPATELLAGIPSVVYGFFGMIVLSN 100

Query: 126 LYPGKVIGAE----LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                   +     LA    +    +  +      ++ ++PR+  E S +   + WQ   
Sbjct: 101 FIRVTFNISSGQTWLAGSILLGIMALPTIISVSEDAISSVPREYREGSLATGATRWQTIS 160

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--GIGSYIALAIKEQDLL 239
            + VP ++ G+   +++ +       +A  M+     +IP P   + S +        + 
Sbjct: 161 KVIVPAALSGIAAAIILGIGRAIGETMAVIMVTGNAAIIPSPIWNVLSSVRTLTGTLGIE 220

Query: 240 AILYAML-----TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV---LYLFRK 291
               A+       + GV  +   +     I           +       W+        +
Sbjct: 221 MGDVAIGSEHYHALFGVAVVLLLITLIINISAVAILSHLGKSAGRAKRPWLDIPALAPVR 280

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
                +       F + L   +     ++ ++      ++ +   ++R    +       
Sbjct: 281 EKLHPYSQKILLAFIALLFLAIGLWEVSIVIVLAAGAWHYGRERFSRRSIERVAFGCVIA 340

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV----------VVLIIIASIIW 401
                + I    +GYI+ +         +      + R           + L+  A +I 
Sbjct: 341 AAMAVLAILAIILGYIIINGLPAISWQFLTQSPTDLGRGGGIFPAIVGTLYLVAGAILIA 400

Query: 402 IPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWL 452
           +P+G+              I+  I+    LL   P+ VF  F      +        +  
Sbjct: 401 LPLGVGAAIYLIEYTREGRITKLIRTGVDLLNGTPSIVFGLFGFAFLVLFLNVGVSLIAG 460

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            + +       ++          P   +E + +   T W+  + +++P   P  VTGAI 
Sbjct: 461 MITLALMVLPTVIRTTEEALKNVPQSLREGSLALGATKWQTIKNVVIPPAVPGIVTGAIL 520

Query: 513 ACGGA 517
           + G A
Sbjct: 521 SIGRA 525



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 74/189 (39%), Gaps = 9/189 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A + V+ I+ I+L  I    +P      +  +              +  L  +  ++L
Sbjct: 339 IAAAMAVLAILAIILGYIIINGLPAISWQFLTQSPTDLGRGGGIFPAIVGTLYLVAGAIL 398

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
                   AA       +  R+  ++   +D++   P + F  F   + +      V  +
Sbjct: 399 IALPLGVGAAIYLIEYTREGRITKLIRTGVDLLNGTPSIVFGLFGFAFLVLFL--NVGVS 456

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +A +  +    +  +  +  ++L N+P+ L E S +   + WQ    + +P ++PG+V 
Sbjct: 457 LIAGMITLALMVLPTVIRTTEEALKNVPQSLREGSLALGATKWQTIKNVVIPPAVPGIVT 516

Query: 195 NMMMSMSGG 203
             ++S+   
Sbjct: 517 GAILSIGRA 525



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 67/198 (33%), Gaps = 14/198 (7%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--- 410
           G +I      + ++             +     +   +++ + A +  +P+ +       
Sbjct: 5   GYSIFETVGPLNFLFGTIWAPGAYVPSYGIAALIIGTLLVTLGAMVFAVPLSLGCAIYIS 64

Query: 411 ---RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGT 460
               P I + ++P  +LLA  P+ V+    +  +S +                 +++   
Sbjct: 65  ELASPRIKNILKPATELLAGIPSVVYGFFGMIVLSNFIRVTFNISSGQTWLAGSILLGIM 124

Query: 461 QWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               + +V     S+ P +++E + +   T W+    +I+P          I   G A  
Sbjct: 125 ALPTIISVSEDAISSVPREYREGSLATGATRWQTISKVIVPAALSGIAAAIILGIGRAIG 184

Query: 520 ASIVSEVASWGHIHLRTT 537
            ++   + +     + + 
Sbjct: 185 ETMAVIMVTGNAAIIPSP 202


>gi|47564659|ref|ZP_00235703.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus G9241]
 gi|47558032|gb|EAL16356.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus G9241]
          Length = 231

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 39  ATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 98

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 99  ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 154

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 155 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 208

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 209 LAIFFVILI 217



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 36  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 95

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 96  GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 147

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 148 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 201

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 202 PIVLLSLLAIFFVILI 217


>gi|309781445|ref|ZP_07676181.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Ralstonia sp. 5_7_47FAA]
 gi|308919858|gb|EFP65519.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [Ralstonia sp. 5_7_47FAA]
          Length = 518

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 23/200 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +   R  + +  +  +++L       +AA+ RR+   ++ ++ ++Q+IP L  L   
Sbjct: 317 GLGRLTQRHLMLVGISTGVAVLLGVPLGLMAAR-RRIKQPILAVVGVLQTIPSLALLAML 375

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +    ++         + A+ A+    +  +  +    L  +P  L + + +   +  Q+
Sbjct: 376 IPIVGSIG-------VVPALIALAVYALLPIVRNTIVGLEQVPDGLRDAALALGFTPSQR 428

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKE 235
              + +P ++P ++  +             + +I VG   I       G G  IA  +  
Sbjct: 429 TRVVDLPLALPVILAGVKT-----------AAVISVGTATIAAFIGAGGYGERIATGLAL 477

Query: 236 QDLLAILYAMLTMLGVIFLY 255
            D   +L   +   G+  L 
Sbjct: 478 NDSATLLAGAIPAAGLALLV 497



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 11/174 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V +   +A ++ +P+G  +  R  I   I     +L   P+     +++  V    +
Sbjct: 326 LMLVGISTGVAVLLGVPLG-LMAARRRIKQPILAVVGVLQTIPSLALLAMLIPIVGSIGV 384

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +   T  +  R + LP   P  
Sbjct: 385 VPAL---IALAVYALLPIVRNTIVGLEQVPDGLRDAALALGFTPSQRTRVVDLPLALPVI 441

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           + G  TA   +   + ++     G       G G  IA          ++ G +
Sbjct: 442 LAGVKTAAVISVGTATIAAFIGAG-------GYGERIATGLALNDSATLLAGAI 488


>gi|237798692|ref|ZP_04587153.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021545|gb|EGI01602.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 271

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 96/269 (35%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59
           M L N  P    R I     F LL F   +G    L     +  +P  +     +     
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPTDKLLPSAVQMADAVKRVAF 60

Query: 60  S---------LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           +         L Q ++ +  R+   + IS L        A         L P+L ++  +
Sbjct: 61  TADARTGDYLLWQDSASSLKRLAIGLGISALLGLCLGIAAGILPLFSAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   + W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGATTWTLILRVVLPQLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P  S+ + P   +L+  P     P++     
Sbjct: 75  SASSLKRLAIGLGISALLGLCLGIAAGILPLFSAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   T W     ++LP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGATTWTLILRVVLPQL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|254436696|ref|ZP_05050190.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198252142|gb|EDY76456.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 208

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L      T    L+   +SL   FV + +      +   L PI  + Q++P++  
Sbjct: 2   LNRALLWDNTLPTITATLAGFTLSLAVAFVLSIVLDFMPCVRRALFPIFVVSQTLPLVAI 61

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               V++F      K++   L   F         M  ++     +   ++E++ RS   S
Sbjct: 62  APLVVLWFGFDLTPKILLVALVTFF--------PMLVALVDGYESTDPEIEDLLRSMGAS 113

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F    +P +MP     + +S++      + +E +          G+G  I  A   
Sbjct: 114 RRVVFRTARLPSAMPYFFAGLRISITYAVVAAIFAEYVG------ARAGLGIVILNAKNS 167

Query: 236 QDLLAILYAML---TMLGVIFLYDQLLFRPMIVWSN 268
                +L A++    +  V+F     L R ++ W N
Sbjct: 168 FRPDLVLAAVVISSALTLVLFAITATLQRVVLRWRN 203



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++  +   + I + F P +   + P   +    P     PLVV    +  
Sbjct: 14  TITATLAGFTLSLAVAFVLSIVLDFMPCVRRALFPIFVVSQTLPLVAIAPLVVLWFGF-- 71

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   LL+   T + +L  ++ G  +   + +++  S   +    +R   LP   PY
Sbjct: 72  --DLTPKILLVALVTFFPMLVALVDGYESTDPEIEDLLRSMGASRRVVFRTARLPSAMPY 129

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G   +   A  A+I +E            GLG  I  +        V+  V+I    
Sbjct: 130 FFAGLRISITYAVVAAIFAEYVG------ARAGLGIVILNAKNSFRPDLVLAAVVISSAL 183

Query: 566 VLAL 569
            L L
Sbjct: 184 TLVL 187


>gi|159185190|ref|NP_355341.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140456|gb|AAK88126.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 291

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 9/225 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +         +        SL  +A  T    L    I  +   + A     +R
Sbjct: 61  VLPAPHQIAAELWDTTVNKAITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNR 120

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   ++P +   Q+IPIL      +V   ++    ++   L + +  F    + +   M
Sbjct: 121 AMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKALISTYLSF----FPIVVGM 176

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +      ++  ++  S  Q FW L  P ++P L  ++ ++++      +  E+  
Sbjct: 177 VKGLRSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGEL-- 234

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  + G+G+ +         + I  A+    GV  L   ++
Sbjct: 235 ---PTGAVAGLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSII 276



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 75/192 (39%), Gaps = 5/192 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   IT+   ++   I +++ I + + I     +   + P+       P     P++
Sbjct: 86  SLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAIAPMI 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + I+  ++ G  +      ++  +++ +  + +  +
Sbjct: 146 IVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQIFWKL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   PY  T    A   A   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 206 RWPSALPYLFTSLKIAIAIALVGAIVGELPTGA-----VAGLGARLLSGSYYGQTVQIWA 260

Query: 558 GVLIMCCFVLAL 569
            + +       L
Sbjct: 261 ALFMAAGVAALL 272


>gi|255030493|ref|ZP_05302444.1| hypothetical protein LmonL_17876 [Listeria monocytogenes LO28]
          Length = 207

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 2   HNLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 61

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 62  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 113

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 114 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 166

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 167 DLILGGAIPVTILALVVEFALGK 189



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 12  LFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 71

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 72  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 127

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 128 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 180

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 181 LVVEFALGKLEYRLTPKAIR 200


>gi|229028528|ref|ZP_04184645.1| ABC transporter, permease [Bacillus cereus AH1271]
 gi|228732746|gb|EEL83611.1| ABC transporter, permease [Bacillus cereus AH1271]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILI 236



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|84685622|ref|ZP_01013519.1| putative ABC transporter membrane protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666288|gb|EAQ12761.1| putative ABC transporter membrane protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 236

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 62/177 (35%), Gaps = 10/177 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+    +  + A+++ IP+G+ IG  P      +       AFP     PL V  +   
Sbjct: 44  ATLRDGFLGAVAAAVVAIPLGLLIGIFPAFELSTRKILDFGRAFPVVALLPLFVLIIGA- 102

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               +    L +     + IL   + GA        +    F I     +  +ILP   P
Sbjct: 103 ---NSQMKVLAIAIACFFPILVQTVYGARRLDPTILDTVRIFRIPFGLRFFRVILPSALP 159

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           Y  TG   A   +   ++ +EV       L   GLG  I  S      PE    V+ 
Sbjct: 160 YIATGLRIATTVSILVAVGTEVI------LPIDGLGYQINLSRIANRVPEAFAYVIY 210



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 86/247 (34%), Gaps = 18/247 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFT 83
            + V  + ++      +   P   V    + L      + A   TLR      V + +  
Sbjct: 1   MIFVWALGSVTGVFNPDVLPPVPDVAREMVALWSTPAFKGALWATLRDGFLGAVAAAVVA 60

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L        +    ILD  ++ P++  L   V+        KV+   +A  F I 
Sbjct: 61  IPLGLLIGIFPAFELSTRKILDFGRAFPVVALLPLFVLIIGANSQMKVLAIAIACFFPIL 120

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              V+            +   + +  R FR+    +F+ + +P ++P +   + ++ +  
Sbjct: 121 VQTVY--------GARRLDPTILDTVRIFRIPFGLRFFRVILPSALPYIATGLRIATTVS 172

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLF 260
               V +E+I      +P+ G+G  I L+     +      ++    +  L      LL 
Sbjct: 173 ILVAVGTEVI------LPIDGLGYQINLSRIANRVPEAFAYVIYAGLLGVLLTLGWELLE 226

Query: 261 RPMIVWS 267
           + ++ W 
Sbjct: 227 KRLLPWH 233


>gi|163846021|ref|YP_001634065.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222523749|ref|YP_002568219.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163667310|gb|ABY33676.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222447628|gb|ACM51894.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 272

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 10/248 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +R  +     +      +   L + W  +V   AI          +    +  +  +  
Sbjct: 17  AVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPPSRIVRTLFASLPVLAG 76

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T+   +    +A +    +GI +   P +   I P        P     PL+V   
Sbjct: 77  HTLATLTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTSQTVPIVAIAPLLVVGF 136

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            +  L       L++   T + I+ N I G  +   D + +  +   + W+  R + L  
Sbjct: 137 GFGLLPK----VLVVALITFFPIVVNTIDGLQSADRDQRRLLEAMGASYWQLLRLLRLRA 192

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   TG   +   +   ++++E          + GLG YIA S       +V +  L+
Sbjct: 193 ALPAIFTGIKVSITYSVIGAVLAEWIG------ASAGLGVYIARSLRAFRTDQVFVAALV 246

Query: 562 MCCFVLAL 569
                +AL
Sbjct: 247 TSLLTIAL 254



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++            P  IV  +  +L V  L  +   T    +    ++L+  F     
Sbjct: 45  GLVWFFAIPDWLLPPPSRIVRTLFASLPV--LAGHTLATLTVTIPGFALALVAGFSLGIA 102

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S  L   + P+L   Q++PI+      VV F            L  +  +     + 
Sbjct: 103 LDASPVLRRAIYPLLVTSQTVPIVAIAPLLVVGFGFGL--------LPKVLVVALITFFP 154

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    L +  RD   +  +   S WQ    L +  ++P +   + +S++      V 
Sbjct: 155 IVVNTIDGLQSADRDQRRLLEAMGASYWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVL 214

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVW 266
           +E I          G+G YIA +++      +  A L    +   +F    LL R ++ W
Sbjct: 215 AEWIGASA------GLGVYIARSLRAFRTDQVFVAALVTSLLTIALFTLVSLLERWIVFW 268


>gi|315640920|ref|ZP_07896016.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           italicus DSM 15952]
 gi|315483338|gb|EFU73838.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           italicus DSM 15952]
          Length = 237

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 73/195 (37%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +         +K R L   ++ + +I+Q++P L  ++  ++    
Sbjct: 40  LRHFLISIYGVLFAAIIAIPIGVAISKKRGLADWVIRLANIIQTVPSLAMVSILMIGLGL 99

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +    +  +  + Y  +  + RD+ +V +   ++  Q+ + + +
Sbjct: 100 GV--------NVVIVTVTLYSLLPIIKNTYTGMIQVDRDIIDVGKGMGMTATQRLFMIEL 151

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  AI+ A 
Sbjct: 152 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTAIILAG 204

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D +L
Sbjct: 205 ALPTALMAIMTDWVL 219



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV           +  ++ A+II IP+G+ I  +  ++  +   A ++   P+     ++
Sbjct: 34  YVFSQFLRHFLISIYGVLFAAIIAIPIGVAISKKRGLADWVIRLANIIQTVPSLAMVSIL 93

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      D  +V     +T  +    I
Sbjct: 94  MIGLGLG----VNVVIVTVTLYSLLPIIKNTYTGMIQVDRDIIDVGKGMGMTATQRLFMI 149

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 150 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTAIIL 202

Query: 558 G 558
            
Sbjct: 203 A 203


>gi|194016608|ref|ZP_03055222.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Bacillus pumilus ATCC
           7061]
 gi|194012081|gb|EDW21649.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, binding protein [Bacillus pumilus ATCC
           7061]
          Length = 505

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 53/141 (37%), Gaps = 8/141 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L             A+ +++L          +  +L   ++ +  ++Q+IP        
Sbjct: 14  QLGHALLEHIQISFIALFLAILIAIPLGIYLTRVPKLAEWVIGVTAVLQTIPS------- 66

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L    V   ++ AI A+    +  +  + Y  +  +   L E + +  ++  ++
Sbjct: 67  -LALLGLLIPLVGIGQVPAIIALVVYALLPILRNTYTGIQEVDPSLREAALAMGMNHRKR 125

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
              + +P +MP ++  +   M
Sbjct: 126 LLKVELPLAMPVIMAGIRTGM 146



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + +A +I IP+GI++   P ++  +     +L   P+     L++  V    +   +
Sbjct: 27  FIALFLAILIAIPLGIYLTRVPKLAEWVIGVTAVLQTIPSLALLGLLIPLVGIGQVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G        +E A +  +   +    + LP   P  + G 
Sbjct: 87  ALVVYALL----PILRNTYTGIQEVDPSLREAALAMGMNHRKRLLKVELPLAMPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            T        + ++ +   G +               ++     +V+G +
Sbjct: 143 RTGMVLIVGTATLAALIGAGGLGSLIL-------LGIDRNDMSLIVIGAI 185


>gi|228963831|ref|ZP_04124967.1| ABC transporter, permease [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228795810|gb|EEM43282.1| ABC transporter, permease [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 82/233 (35%), Gaps = 11/233 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           S +L ++         + I       ++  +  +D+L+ + L   T++ V++ ++I+ ++
Sbjct: 15  STLLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIGVVISIVL 73

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + + + +     +     P        P     PL V    Y          ++ +  T
Sbjct: 74  GVGLAMLMNVSTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKVVVTVLIT 129

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A   +   
Sbjct: 130 FFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIAVPLSVIG 189

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + + E            GLG +      +     V   ++++    +     +
Sbjct: 190 AAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNVSTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|27467141|ref|NP_763778.1| opuCB protein [Staphylococcus epidermidis ATCC 12228]
 gi|251811554|ref|ZP_04826027.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|27314683|gb|AAO03820.1|AE016744_223 opuCB protein [Staphylococcus epidermidis ATCC 12228]
 gi|251804932|gb|EES57589.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
          Length = 211

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           + A+VI+++       L +K  +L  V + I  ++Q+IP L
Sbjct: 5   ISEHSGMLFAKTFEHLYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F           +  AI A+F   +  +  +    + NI  +L E  RS  
Sbjct: 65  AVLALMIPLFGVG--------KTPAIIALFLYVLLPILNNTIIGIQNIDSNLREAGRSMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++P ++  + +S      +   +  +  G       G+G +I   +
Sbjct: 117 MTNFQLMKDVELPLALPLILSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   I+ A + +  +  + D +L
Sbjct: 170 ALFEPSMIITATILVTAIALIVDYVL 195



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +V ++IA I+ +P+GI +  +  +S      A +L   P      L++        
Sbjct: 20  LYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTLAVLALMIPLFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L ++      IL N I G     ++ +E   S  +T ++  + + LP   P  
Sbjct: 80  PAIIALFLYVLL----PILNNTIIGIQNIDSNLREAGRSMGMTNFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG +I           ++   +++    
Sbjct: 136 LSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLALFEPSMIITATILVTAIA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYVL 195


>gi|315303152|ref|ZP_07873823.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria ivanovii FSL F6-596]
 gi|313628483|gb|EFR96945.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria ivanovii FSL F6-596]
          Length = 223

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++   +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIVAIPLGVYIARKKRLAGWVIQTANIIQTIPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   LL 
Sbjct: 189 IPTAVMAILADLLL 202



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 15/191 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+I+ IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIVAIPLGVYIARKKRLAGWVIQTANIIQTIPALAMLAVLMLVMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG----VLIMCCFV 566
             A   A   + +      G       GLG  I   T   +   ++L       +M    
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 567 LALNRFLWHPL 577
             L  ++   L
Sbjct: 199 DLLLGWVERRL 209


>gi|304437239|ref|ZP_07397199.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369731|gb|EFM23396.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 514

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A+ I+++       L     R     + +++ + +IP +  L F + +F          
Sbjct: 31  AAIGIAIIVGGTAGILIYCYERAAAPTLGVVNFLYTIPSISMLGFLIPFFGIGNT----- 85

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AAI A+    +  M  + +  L  IP  L E   S   S +     + +P +MP ++
Sbjct: 86  ---AAIIALTVYALLPMVRATHTGLAQIPASLSEAGASLGGSDFYVLTRVQLPLAMPIIM 142

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +             +  +    + I   G+G  I   I   +    +   L +  +  
Sbjct: 143 AGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNPALTIAGSLLIAVLAL 195

Query: 254 LYDQLLFR 261
             D +L R
Sbjct: 196 SADAVLGR 203



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 11/198 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +   L    ++     I IA I+    GI I      ++        L   P+      +
Sbjct: 17  FFFQLMIEHLWISGAAIGIAIIVGGTAGILIYCYERAAAPTLGVVNFLYTIPSISMLGFL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + L++  +      ++     G +  P    E  +S   + +     +
Sbjct: 77  IPFFGIGNTAAIIALTVYALL----PMVRATHTGLAQIPASLSEAGASLGGSDFYVLTRV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G         N + ++   +     +   GLG  I       +    + 
Sbjct: 133 QLPLAMPIIMAGIR-------NMATMTIALAGIASFIGAGGLGVAIYRGITTNNPALTIA 185

Query: 558 GVLIMCCFVLALNRFLWH 575
           G L++    L+ +  L  
Sbjct: 186 GSLLIAVLALSADAVLGR 203


>gi|197337172|ref|YP_002157911.1| hydroxymethylpyrimidine transport system permease protein [Vibrio
           fischeri MJ11]
 gi|197314424|gb|ACH63873.1| hydroxymethylpyrimidine transport system permease protein [Vibrio
           fischeri MJ11]
          Length = 272

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 95/254 (37%), Gaps = 20/254 (7%)

Query: 18  NIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           N+   +  + +   I +           P  +   +    DV  L +++  T   +L  +
Sbjct: 32  NVISAIVILGLWQFIVMAFALPSFILPSPFSVFSQLIERYDV--LLEHSWITAQEILLGL 89

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            + L    ++A        L   L+PIL   Q+IP+       +++       KV+ A L
Sbjct: 90  GLGLSMGLLFALQMLLFDPLRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAAL 149

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
              F + T          Y  L N P    +++ +   S W    Y+ +P ++P L   +
Sbjct: 150 IIFFPVTTCC--------YDGLRNTPTGYLDLAHTMGASKWAILKYVRLPAALPTLASGI 201

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      VVA    VVG+ V    G+G  +  A     +  +  A+  + G+     
Sbjct: 202 RVAV------VVAPIGAVVGEWVGSSKGLGYLMLQANARMMIDEMFAALFILAGLSVSLY 255

Query: 257 QL---LFRPMIVWS 267
            L   L + +I W 
Sbjct: 256 FLADVLIKKLIPWQ 269



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 109 LRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAALIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   + W   +Y+ LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPTGYLDLAHTMGASKWAILKYVRLPAALPTLASGIRVAVVVAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSKGLGYLMLQANARMMIDEMFAALFILAGLSVSL 254


>gi|183603216|ref|ZP_02710815.2| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183570690|gb|EDT91218.1| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC1087-00]
          Length = 238

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  + + +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLTLGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 67/173 (38%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ + +  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 47  ATLRVALLGLTLGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 107 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 162

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 163 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|229114327|ref|ZP_04243745.1| ABC transporter, permease [Bacillus cereus Rock1-3]
 gi|228669006|gb|EEL24430.1| ABC transporter, permease [Bacillus cereus Rock1-3]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLVMWEIGARIVDEMYILPSPSAIVMKIWELKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----LWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GYTL--------WSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|329732798|gb|EGG69146.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU028]
          Length = 211

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           + A+VI+++       L +K  +L  V + I  ++Q+IP L
Sbjct: 5   ISEHSGMLFTKTFEHLYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F           +  AI A+F   +  +  +    + NI  +L E  RS  
Sbjct: 65  AVLALMIPLFGVG--------KTPAIIALFLYVLLPILNNTIIGIQNIDSNLREAGRSMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++P ++  + +S      +   +  +  G       G+G +I   +
Sbjct: 117 MTNFQLMKDVELPLALPLILSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGL 169

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   I+ A + +  +  + D +L
Sbjct: 170 ALFEPSMIITATILVTAIALIVDYVL 195



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +V ++IA I+ +P+GI +  +  +S      A +L   P      L++        
Sbjct: 20  LYISIVALVIAMIVAVPLGILLSKKEKLSKVSLTIAGVLQTIPTLAVLALMIPLFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L ++      IL N I G     ++ +E   S  +T ++  + + LP   P  
Sbjct: 80  PAIIALFLYVLL----PILNNTIIGIQNIDSNLREAGRSMGMTNFQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG +I           ++   +++    
Sbjct: 136 LSGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLALFEPSMIITATILVTAIA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDYVL 195


>gi|325521539|gb|EGD00342.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. TJI49]
          Length = 217

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ +  I+ ++P +   
Sbjct: 10  SWPELLQLTLQHIWLVGIAVGCAIVAGVPLGILINRHEWLAGPLLGLATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              + +F     G        AI A+F   +  +  + Y +L N+   + E      ++ 
Sbjct: 70  GLMIPFFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALRNVEPGIREAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D LL
Sbjct: 180 SMMKLLVGAVLVSVLAIVADLLL 202



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 8/207 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ +       ++ L    ++ V + +  A +  +P+GI I     ++  +   A ++  
Sbjct: 3   LSAYLASSWPELLQLTLQHIWLVGIAVGCAIVAGVPLGILINRHEWLAGPLLGLATIVLT 62

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N            +E  +  
Sbjct: 63  LPSIALFGLMIPFFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALRNVEPGIREAGTGI 122

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T W+  R + LP   P  + G  TA         ++ V   G       GLG  I  +
Sbjct: 123 GMTSWQRLRLVDLPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRA 175

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + S  ++++G +++    +  +  L
Sbjct: 176 IGQSSMMKLLVGAVLVSVLAIVADLLL 202


>gi|229074439|ref|ZP_04207468.1| ABC transporter, permease [Bacillus cereus Rock4-18]
 gi|228708559|gb|EEL60703.1| ABC transporter, permease [Bacillus cereus Rock4-18]
          Length = 250

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLVMWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|229194756|ref|ZP_04321546.1| ABC transporter, permease protein [Bacillus cereus m1293]
 gi|228588723|gb|EEK46751.1| ABC transporter, permease protein [Bacillus cereus m1293]
          Length = 207

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A +I   + I +           P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILIGTSIAILMDVISLFRILTNPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVM 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLCLYFI 188



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A L        ++  P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILIGTSIAILMDVISLFRILTNPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L    +
Sbjct: 170 RVFGVAAIIVMVTLCLYFI 188


>gi|227550872|ref|ZP_03980921.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecium TX1330]
 gi|257896506|ref|ZP_05676159.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
 gi|293379285|ref|ZP_06625431.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179970|gb|EEI60942.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecium TX1330]
 gi|257833071|gb|EEV59492.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
 gi|292642081|gb|EFF60245.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 213

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 67/167 (40%), Gaps = 15/167 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L  +  +   +++ +   +Q+IP L  L   +  F           +L AI A+F
Sbjct: 35  VPLGVLLTRFPKAATIVIGLTSALQTIPSLALLALMIPLFGVG--------KLPAIIALF 86

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  + N+  +  +V++   ++ +Q  + + +P +MP ++  + ++    
Sbjct: 87  IYSLLPILRNTYIGMKNVDWNYRDVAKGMGMTEFQSIFSVELPIAMPTIMAGIRLAA--- 143

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +V+A   +    + I   G+G  I   +       IL   + +  
Sbjct: 144 -VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPDLILAGTIPVTI 186



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F +Q    ++  G   ++   + +II  II +P+G+ +   P  ++ +      L  
Sbjct: 1   MQQFFHQHGSEILSKGFEHLYISGLALIIGIIIAVPLGVLLTRFPKAATIVIGLTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++           L   + +   +   IL N   G      ++++VA    
Sbjct: 61  IPSLALLALMIPLFGVG----KLPAIIALFIYSLLPILRNTYIGMKNVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +T ++    + LP   P  + G   A     AW              ++   GLG  I  
Sbjct: 117 MTEFQSIFSVELPIAMPTIMAGIRLAAVYVIAWATL---------ASYIGAGGLGDLIFS 167

Query: 546 STEKGSFPEVVLGVL 560
                    ++ G +
Sbjct: 168 GLNNYQPDLILAGTI 182


>gi|149912629|ref|ZP_01901163.1| Binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
 gi|149813035|gb|EDM72861.1| Binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
          Length = 253

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 19/241 (7%)

Query: 23  LAFVLVIGIINILLHGIQET-----TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +   L +G+I  +   I          P  ++ ++   L    L  +   T    L    
Sbjct: 9   IGLFLGLGLIWEIWVTISGVSSLLVPAPSAVLAVLWQGLTDGFLWPHIRVTFAETLLGFA 68

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  +  F +  L ++   L  VL P +   Q +P L      +V+F       VI   L 
Sbjct: 69  LGSVIGFAFGVLLSEVDVLRRVLWPYILASQVVPKLALGPIFIVWFGFGLTSIVIITALI 128

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +  + V          L + P D  ++ R    S  Q    L +P  +P ++  + 
Sbjct: 129 CFFPLLETTVT--------GLRSAPADQRDLFRMLGASRLQTLLRLKIPAGLPVILAGVR 180

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+       V  E I  G       G+G+ I  A    D   +    + +  +  L+ Q
Sbjct: 181 VSVVLALVGAVVGEFISGGQ------GLGASIIAAQGMMDTTLMFALFIVITVMGMLFYQ 234

Query: 258 L 258
           L
Sbjct: 235 L 235



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 72/232 (31%), Gaps = 12/232 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASII 400
            L + W   V    +          V    +Q +          +T    ++   + S+I
Sbjct: 14  GLGLIWEIWVTISGVSSLLVPAPSAVLAVLWQGLTDGFLWPHIRVTFAETLLGFALGSVI 73

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
               G+ +     +   + P+       P     P+ +    +   +    + ++     
Sbjct: 74  GFAFGVLLSEVDVLRRVLWPYILASQVVPKLALGPIFIVWFGFGLTS----IVIITALIC 129

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + +L   + G  + P D +++      +  +    + +P   P  + G   +   A   
Sbjct: 130 FFPLLETTVTGLRSAPADQRDLFRMLGASRLQTLLRLKIPAGLPVILAGVRVSVVLALVG 189

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++V E  S G       GLGA I  +        +    +++    +   + 
Sbjct: 190 AVVGEFISGGQ------GLGASIIAAQGMMDTTLMFALFIVITVMGMLFYQL 235


>gi|170735079|ref|YP_001774193.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169821117|gb|ACA95698.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 217

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ I  ++ ++P +   
Sbjct: 10  SWPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G        AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPLFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALHNVEAGIKEAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D+LL
Sbjct: 180 SMMKLLVGAVLVSLLAIVADRLL 202



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    ++ V + +  A +  +P+GI I     ++  +   A L+   P+   F 
Sbjct: 11  WPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   S +        ++  +   +   I+ N            KE  +   +T W+  
Sbjct: 71  LMIPLFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALHNVEAGIKEAGTGIGMTSWQRL 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA         ++ V   G       GLG  I  +  + S  +
Sbjct: 131 RLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQSSMMK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +++G +++    +  +R L
Sbjct: 184 LLVGAVLVSLLAIVADRLL 202


>gi|237743266|ref|ZP_04573747.1| glycine betaine transport system permease [Fusobacterium sp. 7_1]
 gi|229433045|gb|EEO43257.1| glycine betaine transport system permease [Fusobacterium sp. 7_1]
          Length = 513

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ RR   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHILISLLAISIASVLGIILGIIISEYRRFSGLILGTVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  + NI   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIAILALVFDFIL 199



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRRFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + LP   P  ++G         N   ++   +  
Sbjct: 104 GIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L        ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILELIEKRLTNRKRVKYKI 216


>gi|160940267|ref|ZP_02087612.1| hypothetical protein CLOBOL_05156 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436847|gb|EDP14614.1| hypothetical protein CLOBOL_05156 [Clostridium bolteae ATCC
           BAA-613]
          Length = 220

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V     ++   ++    IT+    + +++         + +           P   L   
Sbjct: 8   VAEAFIKEFPALMENARITLTEAGMGLVLGIATGFGAAVLMDRFDKAYKAFYPIIVLTQT 67

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA    PL+V    Y          +L++  T + I   ++ G  A   D   +  +  
Sbjct: 68  VPAVAIAPLLVLWFGYE----MTPKVILIVITTFFPITVGLLTGFRAADPDAVNLLKAMG 123

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              ++ + YI LPG    + +    +   A   +++SE            GLG Y+    
Sbjct: 124 AGRFQIFCYIKLPGAMGQFFSSLKISASYAVVGAVISEWLGGFG------GLGVYMTRVK 177

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
           +  SF ++   + ++    L L
Sbjct: 178 KAFSFDKMFAVIFLISAISLIL 199



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P  +        +  +L + A  T       +V+ +   F  A L  +  +      P
Sbjct: 1   MLPSPVQVAEAFIKEFPALMENARITLTEAGMGLVLGIATGFGAAVLMDRFDKAYKAFYP 60

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+ + Q++P +      V++F      KVI         I  +  + +T  +        
Sbjct: 61  IIVLTQTVPAVAIAPLLVLWFGYEMTPKVI--------LIVITTFFPITVGLLTGFRAAD 112

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D   + ++     +Q F Y+ +P +M     ++ +S S      V SE +         
Sbjct: 113 PDAVNLLKAMGAGRFQIFCYIKLPGAMGQFFSSLKISASYAVVGAVISEWLGG------F 166

Query: 223 PGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            G+G Y+     A     + A+++ +  +  ++    +LL +  + W
Sbjct: 167 GGLGVYMTRVKKAFSFDKMFAVIFLISAISLILMWAVELLQKKCMPW 213


>gi|241113401|ref|YP_002973236.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861609|gb|ACS59275.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 293

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 81/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +   V      ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVVVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVIIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V    +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDT 292



 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVVVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +I+P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVIIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLFAEYIM 274


>gi|304395160|ref|ZP_07377044.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357413|gb|EFM21776.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 271

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+ +     D +   P       L       +  R+L+ + IS L        A   
Sbjct: 44  LLPGLSQMIAAIDRMAFTPDKRSGEYLLWVDTWISLSRLLTGLAISSLIGLCIGIAAGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P + ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PMTRAALSPFMTVVSMIPPLALLPMLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +      IP +L   +++   + W     + +P  +  L+ ++ + +   W F++++E I
Sbjct: 156 LEHRAREIPAELFIKAQTLGANSWTVVLRVVLPQLLSRLITSLRLLLGSAWLFLISAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  I+  ++ +  + +L D  L
Sbjct: 216 S------ATAGLGYRIFLVRRYMAMDVIIPYVIWITLLAWLMDLAL 255



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I++ R++  + I+S+I + +GI  G  P   + + PF  +++  P     P++       
Sbjct: 77  ISLSRLLTGLAISSLIGLCIGIAAGVFPMTRAALSPFMTVVSMIPPLALLPMLFIVFGLD 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      +L++ G    +  ++   A   P +    A +     W     ++LP +  
Sbjct: 137 ELSK----VMLIVIGITPMLARDLEHRAREIPAELFIKAQTLGANSWTVVLRVVLPQLLS 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T      G AW   I +E  S       T GLG  I       +   ++  V+ +  
Sbjct: 193 RLITSLRLLLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVIIPYVIWITL 246

Query: 565 FVLALNRFLWH 575
               ++  L  
Sbjct: 247 LAWLMDLALRQ 257


>gi|317132134|ref|YP_004091448.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315470113|gb|ADU26717.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 267

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 79/227 (34%), Gaps = 10/227 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L  F+   V    +        + V     Q+   +     +T  R  +   + +++ 
Sbjct: 23  WELAAFFLQNVIHDPMAAKKLPYFHTVIAVLAQNGQDMAGDAAVTFSRAAIGFALGALVG 82

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I + I +     +     P+  +    P     P++ + V     + ++    +  + T 
Sbjct: 83  IILAILMSLSKIVEKIAFPYLIISQMIPVLGLAPIIFNIVR----DMDVSRIFIAAYITF 138

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + +  N+++G  +   D +E+  S     +  +R +++P   P   TG       A  AS
Sbjct: 139 FPVSVNMLSGLRSVEQDKRELLYSIATNKFEVYRKLMIPASLPQLFTGLKITAPMAVTAS 198

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           I+ ++         ++G+G  I  +            V I     + 
Sbjct: 199 ILVDMLG------SSSGIGVRILYALYSSMMDTFWAAVAISALMGII 239



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 98/262 (37%), Gaps = 23/262 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQYASR 67
           RRI   ++ L+  +LV  +    L  +    +    +      + V +     +   A+ 
Sbjct: 8   RRIVAVVW-LIGVILVWELAAFFLQNVIHDPMAAKKLPYFHTVIAVLAQNGQDMAGDAAV 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R      +  L   + A L + S+ +  +  P L I Q IP+LG          ++ 
Sbjct: 67  TFSRAAIGFALGALVGIILAILMSLSKIVEKIAFPYLIISQMIPVLGLAPIIFNIVRDM- 125

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  +++ IF       + ++ +M   L ++ +D  E+  S   + ++ +  L +P 
Sbjct: 126 -------DVSRIFIAAYITFFPVSVNMLSGLRSVEQDKRELLYSIATNKFEVYRKLMIPA 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P L   + ++        +  +M+          GIG  I  A+    +     A+  
Sbjct: 179 SLPQLFTGLKITAPMAVTASILVDMLGSSS------GIGVRILYALYSSMMDTFWAAVAI 232

Query: 248 ---MLGVIFLYDQLLFRPMIVW 266
              M  + +    +L R +I W
Sbjct: 233 SALMGIISYYVIVVLERFLIPW 254


>gi|46907653|ref|YP_014042.1| glycine betaine/L-proline ABC transporter permease [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47092715|ref|ZP_00230501.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217964427|ref|YP_002350105.1| glycine betaine/carnitine/choline transport system permeaseopuCD
           [Listeria monocytogenes HCC23]
 gi|226224026|ref|YP_002758133.1| betaine/carnitine/choline ABC transporter (membrane protein)
           [Listeria monocytogenes Clip81459]
 gi|254852532|ref|ZP_05241880.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254932610|ref|ZP_05265969.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|254992613|ref|ZP_05274803.1| betaine/carnitine/choline ABC transporter (membrane protein)
           [Listeria monocytogenes FSL J2-064]
 gi|255522555|ref|ZP_05389792.1| betaine/carnitine/choline ABC transporter (membrane protein)
           [Listeria monocytogenes FSL J1-175]
 gi|284801811|ref|YP_003413676.1| hypothetical protein LM5578_1566 [Listeria monocytogenes 08-5578]
 gi|284994953|ref|YP_003416721.1| hypothetical protein LM5923_1518 [Listeria monocytogenes 08-5923]
 gi|290894094|ref|ZP_06557067.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|300765778|ref|ZP_07075754.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|46880921|gb|AAT04219.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018903|gb|EAL09650.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217333697|gb|ACK39491.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Listeria monocytogenes HCC23]
 gi|225876488|emb|CAS05197.1| Putative betaine/carnitine/choline ABC transporter (membrane
           protein) [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605840|gb|EEW18448.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|284057373|gb|ADB68314.1| hypothetical protein LM5578_1566 [Listeria monocytogenes 08-5578]
 gi|284060420|gb|ADB71359.1| hypothetical protein LM5923_1518 [Listeria monocytogenes 08-5923]
 gi|290556349|gb|EFD89890.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293584169|gb|EFF96201.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|300513553|gb|EFK40624.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes FSL N1-017]
 gi|307571008|emb|CAR84187.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes L99]
 gi|313608803|gb|EFR84606.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria monocytogenes FSL F2-208]
 gi|328465472|gb|EGF36701.1| hypothetical protein LM1816_05985 [Listeria monocytogenes 1816]
 gi|328474947|gb|EGF45741.1| hypothetical protein LM220_03077 [Listeria monocytogenes 220]
 gi|332311866|gb|EGJ24961.1| Permease [Listeria monocytogenes str. Scott A]
          Length = 223

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   +L 
Sbjct: 189 IPTAVMAILADVLL 202



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
             A   A   + +      G       GLG  I   T   +    ++ G +      +  
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 570 NRFL 573
           +  L
Sbjct: 199 DVLL 202


>gi|69249041|ref|ZP_00604856.1| Binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium DO]
 gi|257878857|ref|ZP_05658510.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257881493|ref|ZP_05661146.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|257885765|ref|ZP_05665418.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|257890715|ref|ZP_05670368.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|257893325|ref|ZP_05672978.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
 gi|257899486|ref|ZP_05679139.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
 gi|258615072|ref|ZP_05712842.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecium DO]
 gi|260558422|ref|ZP_05830618.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|293560277|ref|ZP_06676774.1| OpuCB [Enterococcus faecium E1162]
 gi|293567790|ref|ZP_06679131.1| OpuCB [Enterococcus faecium E1071]
 gi|293573020|ref|ZP_06683962.1| OpuCB [Enterococcus faecium E980]
 gi|294618445|ref|ZP_06698015.1| OpuCB [Enterococcus faecium E1679]
 gi|294620890|ref|ZP_06700091.1| OpuCB [Enterococcus faecium U0317]
 gi|314938948|ref|ZP_07846213.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943501|ref|ZP_07850268.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314948205|ref|ZP_07851599.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314951565|ref|ZP_07854611.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991573|ref|ZP_07857049.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314994906|ref|ZP_07860033.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|68194300|gb|EAN08816.1| Binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium DO]
 gi|257813085|gb|EEV41843.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257817151|gb|EEV44479.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|257821621|gb|EEV48751.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|257827075|gb|EEV53701.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|257829704|gb|EEV56311.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
 gi|257837398|gb|EEV62472.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
 gi|260075596|gb|EEW63902.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|291589375|gb|EFF21182.1| OpuCB [Enterococcus faecium E1071]
 gi|291595286|gb|EFF26609.1| OpuCB [Enterococcus faecium E1679]
 gi|291599501|gb|EFF30517.1| OpuCB [Enterococcus faecium U0317]
 gi|291605727|gb|EFF35164.1| OpuCB [Enterococcus faecium E1162]
 gi|291606922|gb|EFF36302.1| OpuCB [Enterococcus faecium E980]
 gi|313590888|gb|EFR69733.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593857|gb|EFR72702.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313596259|gb|EFR75104.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597873|gb|EFR76718.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313641657|gb|EFS06237.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313645338|gb|EFS09918.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 213

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 67/167 (40%), Gaps = 15/167 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L  +  +   +++ +   +Q+IP L  L   +  F           +L AI A+F
Sbjct: 35  VPLGVLLTRFPKAATIVIGLTSALQTIPSLALLALMIPLFGVG--------KLPAIIALF 86

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  + N+  +  +V++   ++ +Q  + + +P +MP ++  + ++    
Sbjct: 87  IYSLLPILRNTYIGMKNVDWNYRDVAKGMGMTEFQSIFSVELPIAMPTIMAGIRLAA--- 143

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +V+A   +    + I   G+G  I   +       IL   + +  
Sbjct: 144 -VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPDLILAGTIPVTI 186



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F +Q    ++  G   ++   + +II  II +P+G+ +   P  ++ +      L  
Sbjct: 1   MQQFFHQHGSEILSKGFEHLYISGLALIIGIIIAVPLGVLLTRFPKAATIVIGLTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++           L   + +   +   IL N   G      ++++VA    
Sbjct: 61  IPSLALLALMIPLFGVG----KLPAIIALFIYSLLPILRNTYIGMKNVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +T ++    + LP   P  + G   A     AW              ++   GLG  I  
Sbjct: 117 MTEFQSIFSVELPIAMPTIMAGIRLAAVYVIAWATL---------ASYIGAGGLGDLIFS 167

Query: 546 STEKGSFPEVVLGVL 560
                    ++ G +
Sbjct: 168 GLNNYQPDLILAGTI 182


>gi|16803465|ref|NP_464950.1| hypothetical protein lmo1425 [Listeria monocytogenes EGD-e]
 gi|47095376|ref|ZP_00232986.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254827713|ref|ZP_05232400.1| opuCD [Listeria monocytogenes FSL N3-165]
 gi|254829816|ref|ZP_05234471.1| hypothetical protein Lmon1_00605 [Listeria monocytogenes 10403S]
 gi|254898409|ref|ZP_05258333.1| hypothetical protein LmonJ_01300 [Listeria monocytogenes J0161]
 gi|254912100|ref|ZP_05262112.1| membrane permease OpuCD [Listeria monocytogenes J2818]
 gi|254936427|ref|ZP_05268124.1| opuCD [Listeria monocytogenes F6900]
 gi|255030505|ref|ZP_05302456.1| hypothetical protein LmonL_17936 [Listeria monocytogenes LO28]
 gi|9651978|gb|AAF91342.1|AF249729_4 membrane permease OpuCD [Listeria monocytogenes]
 gi|16410854|emb|CAC99503.1| opuCD [Listeria monocytogenes EGD-e]
 gi|47016197|gb|EAL07120.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258600092|gb|EEW13417.1| opuCD [Listeria monocytogenes FSL N3-165]
 gi|258609019|gb|EEW21627.1| opuCD [Listeria monocytogenes F6900]
 gi|293590068|gb|EFF98402.1| membrane permease OpuCD [Listeria monocytogenes J2818]
          Length = 223

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   +L 
Sbjct: 189 IPTAVMAILADVLL 202



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
             A   A   + +      G       GLG  I   T   +    ++ G +      +  
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 570 NRFL 573
           +  L
Sbjct: 199 DVLL 202


>gi|116872858|ref|YP_849639.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741736|emb|CAK20860.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 223

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   +L 
Sbjct: 189 IPTAVMAILADVLL 202



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
             A   A   + +      G       GLG  I   T   +    ++ G +      +  
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 570 NRFL 573
           +  L
Sbjct: 199 DVLL 202


>gi|111219642|ref|YP_710436.1| hypothetical protein FRAAL0143 [Frankia alni ACN14a]
 gi|111147174|emb|CAJ58822.1| hypothetical protein; putative membrane protein; putative permease
           of ABC transporter [Frankia alni ACN14a]
          Length = 249

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
            +      +     T    +V + IA+ + +   + +     +     P+A  L   P  
Sbjct: 38  DWTTFHETLRGLGATAKVALVGLAIAATLGMVFAVLMSQAGWVERSFYPWAVALQTIPIL 97

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL+   + Y         +++ +    + I+ N + G  +   +  ++ +      W
Sbjct: 98  AIVPLIGFWLGYGF----WSRTVVCVLVALFPIITNTLFGLRSTDAEQHDLFTLRQAGRW 153

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
               ++  P   P   TG   + G +   +IV +            G+G+ I + T++  
Sbjct: 154 ARLVHLEFPSALPAVFTGLRISAGLSVIGAIVGDFF----FRQGQPGIGSLIDDYTQRLQ 209

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              +   +++   F LA     W  L+    R
Sbjct: 210 SAPLFAAIIVSSLFGLA---LFW--LFGLAAR 236



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 12/195 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T    L  + I+     V+A L +++  +     P    +Q+IPIL  +     +  
Sbjct: 49  LGATAKVALVGLAIAATLGMVFAVLMSQAGWVERSFYPWAVALQTIPILAIVPLIGFWLG 108

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  + +   L A+F I T+ ++         L +   +  ++    +   W +  +L 
Sbjct: 109 YGFWSRTVVCVLVALFPIITNTLF--------GLRSTDAEQHDLFTLRQAGRWARLVHLE 160

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P ++P +   + +S        +  +           PGIGS I    +      +  A
Sbjct: 161 FPSALPAVFTGLRISAGLSVIGAIVGDFF----FRQGQPGIGSLIDDYTQRLQSAPLFAA 216

Query: 245 MLTMLGVIFLYDQLL 259
           ++           L 
Sbjct: 217 IIVSSLFGLALFWLF 231


>gi|206579612|ref|YP_002238386.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|238894834|ref|YP_002919568.1| putative ABC transport system inner membrane component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|290509415|ref|ZP_06548786.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
 gi|206568670|gb|ACI10446.1| ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|238547150|dbj|BAH63501.1| putative ABC transport system inner membrane component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|289778809|gb|EFD86806.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp.
           1_1_55]
          Length = 246

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 87/231 (37%), Gaps = 16/231 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R++         +++ G+ +    GI    +P  +     + ++   L  +   T   +L
Sbjct: 4   RLWRGSMVFCGLMILWGLASR--SGIPHFLLPSPMAVAEALWVNRAYLGWHTLITLSEIL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S + + +      A     S RL   L+P++   Q+IP+       V++       KV  
Sbjct: 62  SGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQAIPVFALAPLLVLWLGFGMSAKVAM 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F         +T + +  L  + ++  +++RS   S   +  ++ +  ++P L 
Sbjct: 122 AVLVIFF--------PVTSAFFDGLRRVNQEYLDLARSMNASFGAQLRHVRLMAALPALG 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             + M+ +      VA    ++G+ V    G+G  +  A           A
Sbjct: 174 SGLRMAAA------VAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAA 218



 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + +  Y+ W   IT+  ++  + +   + + + + +   P +   + P      A
Sbjct: 38  VAEALWVNRAYLGWHTLITLSEILSGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQA 97

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V  +  + ++  + +++L+IF   + +      G      ++ ++A S +
Sbjct: 98  IPVFALAPLLVLWLG-FGMSAKVAMAVLVIF---FPVTSAFFDGLRRVNQEYLDLARSMN 153

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +     R++ L    P   +G   A   A   +I+ E            GLG  +  + 
Sbjct: 154 ASFGAQLRHVRLMAALPALGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLNAN 207

Query: 548 EKGSFPEVVLG 558
            +         
Sbjct: 208 ARLQTDICFAA 218


>gi|323490498|ref|ZP_08095704.1| glycine betaine/L-proline ABC transporter (permease), putative
           [Planococcus donghaensis MPA1U2]
 gi|323395764|gb|EGA88604.1| glycine betaine/L-proline ABC transporter (permease), putative
           [Planococcus donghaensis MPA1U2]
          Length = 212

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ + +        L  + RR    ++ +  + Q+IP L    F V       P    
Sbjct: 27  FVAVAVGIAIALPLGILITRYRRYAESIIGVTAVFQTIPSLALFGFLVPILGIGSP---- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  + Y  +  +     E  R   ++  Q    + +P ++P +
Sbjct: 83  ----TALIALIIYALLPILRNTYAGIAGVDGSTIEAGRGMGMTRTQILRQIELPLALPFI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +        V +  I    T +   G+G  I   ++  +   +L   L +  + 
Sbjct: 139 MAGIRTA-------TVLTVGIATLATFVGAGGLGDIIYRGLQSYNNSLVLAGALPVALLA 191

Query: 253 FLYDQLL 259
             +DQ+L
Sbjct: 192 IGFDQIL 198



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V + +   I +P+GI I      +  I     +    P+   F  +V  +        +
Sbjct: 27  FVAVAVGIAIALPLGILITRYRRYAESIIGVTAVFQTIPSLALFGFLVPILGIGSPTALI 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N  AG +       E      +T  +  R I LP   P+ + G 
Sbjct: 87  ALIIYALL----PILRNTYAGIAGVDGSTIEAGRGMGMTRTQILRQIELPLALPFIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       ++++   +     +   GLG  I    +  +   V+ G L +    +  +
Sbjct: 143 RTA-------TVLTVGIATLATFVGAGGLGDIIYRGLQSYNNSLVLAGALPVALLAIGFD 195

Query: 571 RFL 573
           + L
Sbjct: 196 QIL 198


>gi|312437132|gb|ADQ76203.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus TCH60]
          Length = 211

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           + A++++++       L +K++R   +++ +  ++Q+IP L  L   
Sbjct: 11  QLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAIM 70

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F           +  AI A+F   +  +  +    + NI  +++E  +S  ++ +Q 
Sbjct: 71  IPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQL 122

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D L
Sbjct: 123 MKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDPL 175

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A + +  +    D LL
Sbjct: 176 MIVTATVLVTALALGVDALL 195



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++  + ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGVQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPAIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|197303137|ref|ZP_03168182.1| hypothetical protein RUMLAC_01861 [Ruminococcus lactaris ATCC
           29176]
 gi|197297792|gb|EDY32347.1| hypothetical protein RUMLAC_01861 [Ruminococcus lactaris ATCC
           29176]
          Length = 291

 Score = 78.8 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 76/208 (36%), Gaps = 11/208 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     IT++  +      ++  + V + +     +S  ++P+  +L + P +   PL+
Sbjct: 95  SIFLHIGITLYETLASFACVTLFSLLVAVLLWSSRKLSEILEPYLVVLNSLPKSALAPLL 154

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + +FG+    + N+         +   +  + H         +
Sbjct: 155 IVWLGATPTTIIVAGMSVAVFGS----ILNLYTAFITVDEEKIRLIYTLHGKRQHILTKV 210

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   P  ++      G      ++ E  +        +GLG  I  +++      +++
Sbjct: 211 ILPSSIPAVISNMKVNIGLCLVGVVIGEFLA------AKSGLGYLIIYASQTFKMTWLLM 264

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            + I+C   +AL   + + L  +  R  
Sbjct: 265 SICILCLIAMALYALI-NALEKWYQRKY 291



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 15/206 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    L++     LF+ + A L   SR+L  +L P L ++ S+P        +V+ 
Sbjct: 99  HIGITLYETLASFACVTLFSLLVAVLLWSSRKLSEILEPYLVVLNSLPKSALAPLLIVWL 158

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     A+F            ++Y +   +  +   +  +           +
Sbjct: 159 GATPTTIIVAGMSVAVFGSI--------LNLYTAFITVDEEKIRLIYTLHGKRQHILTKV 210

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      VV  E +          G+G  I  A +   +  +L 
Sbjct: 211 ILPSSIPAVISNMKVNIGLCLVGVVIGEFLAAKS------GLGYLIIYASQTFKMTWLLM 264

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNK 269
           ++  +  +      L+   +  W  +
Sbjct: 265 SICILCLIAMALYALI-NALEKWYQR 289


>gi|167761066|ref|ZP_02433193.1| hypothetical protein CLOSCI_03464 [Clostridium scindens ATCC 35704]
 gi|167661300|gb|EDS05430.1| hypothetical protein CLOSCI_03464 [Clostridium scindens ATCC 35704]
          Length = 258

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 14/249 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITM 387
               ++           + W      +   I   S   +V   +   V    W     + 
Sbjct: 9   SRSSRITVRIMAVAFWLLVWQIGSMWLGQEILLASPVSVVRKLSDLLVTQEFWKSVWFSF 68

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R++   + A  I   + I       +     P    + + P   F  L +  +      
Sbjct: 69  GRIIGGFLSALAIGTLLAILSYRFGWVKILFHPLVTAVKSTPVASFIILCLIWI------ 122

Query: 448 PNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           P+  L++ + F   + +++ N++ G         E+A  F I   +   YI LP + PY 
Sbjct: 123 PSRNLAVFISFLIVFPVIYANLLEGLQRTDEQLLEMADVFSIGKVKRALYIYLPQVLPYL 182

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +T      G  W A   +EV            +G  +  +    + P++    L++    
Sbjct: 183 LTACSLGLGLCWKAGTAAEVIGVPEGS-----IGEKLYHAKIYLNTPDLFAWTLVIITIS 237

Query: 567 LALNR-FLW 574
               + FLW
Sbjct: 238 FLFEKCFLW 246



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 97/244 (39%), Gaps = 14/244 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S RI   I  +  ++LV  I ++ L        P  +V  +   L      +    +  R
Sbjct: 11  SSRITVRIMAVAFWLLVWQIGSMWLGQEILLASPVSVVRKLSDLLVTQEFWKSVWFSFGR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   + +L    + A L+ +   + ++  P++  ++S P+  F+   +++         
Sbjct: 71  IIGGFLSALAIGTLLAILSYRFGWVKILFHPLVTAVKSTPVASFIILCLIW--------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I +   A+F  F      +  ++ + L      L E++  F +   ++  Y+ +P  +P 
Sbjct: 122 IPSRNLAVFISFLIVFPVIYANLLEGLQRTDEQLLEMADVFSIGKVKRALYIYLPQVLPY 181

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    + +   W    A+E+I V +       IG  +  A    +   +    L ++ +
Sbjct: 182 LLTACSLGLGLCWKAGTAAEVIGVPEGS-----IGEKLYHAKIYLNTPDLFAWTLVIITI 236

Query: 252 IFLY 255
            FL+
Sbjct: 237 SFLF 240


>gi|116872860|ref|YP_849641.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741738|emb|CAK20862.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 218

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPAGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +               L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPLLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             IL   + +  +  + +  L +
Sbjct: 178 DLILGGAIPVTILALIVEFALGK 200



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPAGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPLLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L +   L    Y    + +R
Sbjct: 192 LIVEFALGKLEYRLTPKAIR 211


>gi|24380449|ref|NP_722404.1| putative osmoprotectant ABC transporter; permease protein
           [Streptococcus mutans UA159]
 gi|290581380|ref|YP_003485772.1| putative osmoprotectant ABC transporter permease [Streptococcus
           mutans NN2025]
 gi|24378477|gb|AAN59710.1|AE015033_5 putative osmoprotectant ABC transporter; permease protein
           [Streptococcus mutans UA159]
 gi|254998279|dbj|BAH88880.1| putative osmoprotectant ABC transporter permease protein
           [Streptococcus mutans NN2025]
          Length = 210

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + ++          +  +L  + + I  I+Q+IP L  L   + +F          
Sbjct: 25  IALCLGIIVAVPIGVALTRFPKLAKIFIGIASILQTIPSLALLAIMIPFFGIGRTP---- 80

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AI A+F   +  +  + Y  + N+   L++ ++   +   Q  + + +P ++P ++
Sbjct: 81  ----AIIALFVYSLLPIMRNTYIGMNNVDPILKDSAKGMGMKPIQSIFQVELPLAVPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   + ++ +  
Sbjct: 137 TGIRLSAIYVIAWATLASYIGAG-------GLGDLIFSGLSLFQPSLIIGGTIPVILLSL 189

Query: 254 LYDQLLFR 261
           + D LL R
Sbjct: 190 IVDYLLGR 197



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + +  I+ +P+G+ +   P ++      A +L   P+     +++            
Sbjct: 24  AIALCLGIIVAVPIGVALTRFPKLAKIFIGIASILQTIPSLALLAIMIPFFGIGRT---- 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   I+ N   G +      K+ A    +   +    + LP   P  +TG 
Sbjct: 80  PAIIALFVYSLLPIMRNTYIGMNNVDPILKDSAKGMGMKPIQSIFQVELPLAVPVIMTGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +       + ++     G       GLG  I           ++ G + +    L ++
Sbjct: 140 RLSAIYVIAWATLASYIGAG-------GLGDLIFSGLSLFQPSLIIGGTIPVILLSLIVD 192

Query: 571 RFLWH 575
             L  
Sbjct: 193 YLLGR 197


>gi|296163407|ref|ZP_06846162.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295886348|gb|EFG66211.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 252

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 13/182 (7%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ +   P +   + P      A P  V +P+++  +          L  +        +
Sbjct: 78  GVLLFRLPRVRRVLDPLLLSYYAVPVFVLYPILIVVLGL----NRWPLVGIGFLFAVVAM 133

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             N + G    P      A    +  +   R I LP   P+  TG       A+ A +  
Sbjct: 134 AVNTLNGLERVPRVLLRTARVCRLNTFDEIRLITLPSSLPFVFTGIKLTVVYAFIAVVAG 193

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH---PLYLYG 581
           E    G      +G G  IA +      P +   +++M  FV +LN  L      LY   
Sbjct: 194 EFVLSG------SGFGYQIAFAYNNFDNPTMYGLMVLMLLFVSSLNALLRTAEARLYRRI 247

Query: 582 TR 583
            R
Sbjct: 248 RR 249



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 92/242 (38%), Gaps = 21/242 (8%)

Query: 25  FVLVIGIINILLHGIQETT-------VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
             LV+G+I +L    +           P  +V      L          +T    L A+ 
Sbjct: 9   LGLVVGLIVLLEIASRAAWIDPISFIPPSRMVVSAVQLLLSGQYTTDILQTLGSALLAVA 68

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++++  F+   L  +  R+  VL P+L    ++P+       +V         V    L 
Sbjct: 69  LAVVAGFIGGVLLFRLPRVRRVLDPLLLSYYAVPVFVLYPILIVVLGLNRWPLVGIGFLF 128

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A        M  +    L  +PR L   +R  RL+ + +   + +P S+P +   + 
Sbjct: 129 AVVA--------MAVNTLNGLERVPRVLLRTARVCRLNTFDEIRLITLPSSLPFVFTGIK 180

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   +  VVA E ++ G       G G  IA A    D   +   M+ ML  +   + 
Sbjct: 181 LTVVYAFIAVVAGEFVLSGS------GFGYQIAFAYNNFDNPTMYGLMVLMLLFVSSLNA 234

Query: 258 LL 259
           LL
Sbjct: 235 LL 236


>gi|16800532|ref|NP_470800.1| hypothetical protein lin1464 [Listeria innocua Clip11262]
 gi|16413937|emb|CAC96695.1| opuCD [Listeria innocua Clip11262]
 gi|313618946|gb|EFR90795.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria innocua FSL S4-378]
 gi|313623804|gb|EFR93935.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria innocua FSL J1-023]
          Length = 223

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   +L 
Sbjct: 189 IPTAVMAILADVLL 202



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
             A   A   + +      G       GLG  I   T   +    ++ G +      +  
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 570 NRFL 573
           +  L
Sbjct: 199 DVLL 202


>gi|87120187|ref|ZP_01076082.1| Probable inner-membrane permease [Marinomonas sp. MED121]
 gi|86164290|gb|EAQ65560.1| Probable inner-membrane permease [Marinomonas sp. MED121]
          Length = 217

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 75/196 (38%), Gaps = 10/196 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +        +  A+ ++ +          ++ ++  +++ I  I+ +IP +      +
Sbjct: 14  LLKLTIEHISLVAVAVGLATVTGVPIGIAITQNEKMANIVLYIASIIITIPSIALFGLMI 73

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                +  G      L A+ A+       +  + Y ++ N+   L E +R   ++  Q+ 
Sbjct: 74  PILSVIGQGI---GYLPAVIAVLLYSQLPIIRNTYTAINNVDPALREAARGIGMNPMQRL 130

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  + +++      +  +  I  G       G+G  I+  I + D   
Sbjct: 131 RMVEIPLATPVIMAGIRIAVVMNIGVMAIASYIGAG-------GLGVLISRGISQSDPRQ 183

Query: 241 ILYAMLTMLGVIFLYD 256
           ++   + +  +  + D
Sbjct: 184 LIAGAIAVSVLAIIAD 199



 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +F +Q+   ++ L    +  V V + +A++  +P+GI I     +++ +   A ++  
Sbjct: 3   IINFLFQNQELLLKLTIEHISLVAVAVGLATVTGVPIGIAITQNEKMANIVLYIASIIIT 62

Query: 428 FPANVFFPLVVSCVSYYHLNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++  +S        L   + ++  +Q  I+ N     +      +E A   
Sbjct: 63  IPSIALFGLMIPILSVIGQGIGYLPAVIAVLLYSQLPIIRNTYTAINNVDPALREAARGI 122

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +   +  R + +P   P  + G   A         ++     G       GLG  I+  
Sbjct: 123 GMNPMQRLRMVEIPLATPVIMAGIRIAVVMNIGVMAIASYIGAG-------GLGVLISRG 175

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
             +    +++ G + +    +  +
Sbjct: 176 ISQSDPRQLIAGAIAVSVLAIIAD 199


>gi|288935365|ref|YP_003439424.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288890074|gb|ADC58392.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 246

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 87/231 (37%), Gaps = 16/231 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R++         +++ G+ +    GI    +P  +     + ++   L  +   T   +L
Sbjct: 4   RLWRGGMVFCGLMILWGLASR--SGIPHFLLPSPMAVAEALWVNRAYLGWHTLITLSEIL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S + + +      A     S RL   L+P++   Q+IP+       V++       KV  
Sbjct: 62  SGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQAIPVFALAPLLVLWLGFGMSAKVAM 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F         +T + +  L  + ++  +++RS   S   +  ++ +  ++P L 
Sbjct: 122 AVLVIFF--------PVTSAFFDGLRRVNQEYLDLARSMNASFGAQLRHVRLMAALPALG 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             + M+ +      VA    ++G+ V    G+G  +  A           A
Sbjct: 174 SGLRMAAA------VAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAA 218



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + +  Y+ W   IT+  ++  + +   + + + + +   P +   + P      A
Sbjct: 38  VAEALWVNRAYLGWHTLITLSEILSGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQA 97

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V  +  + ++  + +++L+IF   + +      G      ++ ++A S +
Sbjct: 98  IPVFALAPLLVLWLG-FGMSAKVAMAVLVIF---FPVTSAFFDGLRRVNQEYLDLARSMN 153

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +     R++ L    P   +G   A   A   +I+ E            GLG  +  + 
Sbjct: 154 ASFGAQLRHVRLMAALPALGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLNAN 207

Query: 548 EKGSFPEVVLG 558
            +         
Sbjct: 208 ARLQTDICFAA 218


>gi|190893710|ref|YP_001980252.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rhizobium
           etli CIAT 652]
 gi|190698989|gb|ACE93074.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 268

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 15/226 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +    AF+    +  + L G++ + +P     +    L+  +L      T    L
Sbjct: 20  RASPALLAGFAFLAAWEL-YVDLSGVKPSILPAPWRILTQGWLNREALISNTWPTLGATL 78

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F FV + L      +   L+PI    Q++P++      V++F          
Sbjct: 79  GGFALSLAFAFVSSILMDFMPFMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL------ 132

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q      RD+ E+  S + S W+ F    +P S+P   
Sbjct: 133 --LPKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPYFF 190

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             + +S++      + +E            G+G YI  A       
Sbjct: 191 AGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNNFRPD 230



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 73  TLGATLGGFALSLAFAFVSSILMDFMPFMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R   LP   PY
Sbjct: 133 L----PKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPY 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           +  G   +   A   +I +E A          GLG YI  +   
Sbjct: 189 FFAGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNN 226


>gi|329914088|ref|ZP_08276029.1| L-proline glycine betaine binding ABC transporter protein ProX /
           Osmotic adaptation [Oxalobacteraceae bacterium IMCC9480]
 gi|327545233|gb|EGF30496.1| L-proline glycine betaine binding ABC transporter protein ProX /
           Osmotic adaptation [Oxalobacteraceae bacterium IMCC9480]
          Length = 433

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V V I+ AS+I IP+G+   F   +   +     +L   PA     +++  +      P 
Sbjct: 244 VAVAILAASLIGIPLGVLAAFVRPLRQAVMALVGVLQTIPALALLAMLIPLLGRIGTTPA 303

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L    L        I+ N   G    P   +  A +  ++      +I LP   P  + G
Sbjct: 304 LIALFLY---ALLPIVRNTCTGVLQVPAGLRMAALALGLSRRDRLLHIDLPLALPVILAG 360

Query: 510 AITACGGAWNASIVSEVASWGHI 532
             TA   +   + ++     G  
Sbjct: 361 LKTAAVMSVGTATIAAFIGAGGY 383



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +  + +  A++ + L       LAA  R L   ++ ++ ++Q+IP L  L   +     +
Sbjct: 239 QHVVLVAVAILAASLIGIPLGVLAAFVRPLRQAVMALVGVLQTIPALALLAMLIPLLGRI 298

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                      A+ A+F   +  +  +    +  +P  L   + +  LS   +  ++ +P
Sbjct: 299 GTTP-------ALIALFLYALLPIVRNTCTGVLQVPAGLRMAALALGLSRRDRLLHIDLP 351

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            ++P ++  +  +          +  I  G       G G  IA+ +   D
Sbjct: 352 LALPVILAGLKTAAVMSVGTATIAAFIGAG-------GYGERIAIGLALND 395


>gi|241663964|ref|YP_002982324.1| glycine betaine ABC transporter substrate-binding protein
           [Ralstonia pickettii 12D]
 gi|240865991|gb|ACS63652.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Ralstonia pickettii 12D]
          Length = 518

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 23/200 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +   R  + +  +  +++L       +AA+ RR+   ++ ++ ++Q+IP L  L   
Sbjct: 317 GLGRLTQRHLMLVGISTGVAVLLGVPLGLMAAR-RRIKQPILAVVGVLQTIPSLALLAML 375

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +    ++         + A+ A+    +  +  +    L  +P  L + + +   +  Q+
Sbjct: 376 IPIVGSIG-------VVPALIALAVYALLPIVRNTIVGLEQVPDGLRDAALALGFTPSQR 428

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKE 235
              + +P ++P ++  +             + +I VG   I       G G  IA  +  
Sbjct: 429 TRVVDLPLALPVILAGVKT-----------AAVISVGTATIAAFIGAGGYGERIATGLAL 477

Query: 236 QDLLAILYAMLTMLGVIFLY 255
            D   +L   +   G+  L 
Sbjct: 478 NDSATLLAGAIPAAGLALLV 497



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 11/174 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V +   +A ++ +P+G  +  R  I   I     +L   P+     +++  V    +
Sbjct: 326 LMLVGISTGVAVLLGVPLG-LMAARRRIKQPILAVVGVLQTIPSLALLAMLIPIVGSIGV 384

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +       I+ N I G    P+  ++ A +   T  +  R + LP   P  
Sbjct: 385 VPAL---IALAVYALLPIVRNTIVGLEQVPDGLRDAALALGFTPSQRTRVVDLPLALPVI 441

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           + G  TA   +   + ++     G       G G  IA          ++ G +
Sbjct: 442 LAGVKTAAVISVGTATIAAFIGAG-------GYGERIATGLALNDSATLLAGAI 488


>gi|293556907|ref|ZP_06675468.1| OpuCB [Enterococcus faecium E1039]
 gi|291600991|gb|EFF31282.1| OpuCB [Enterococcus faecium E1039]
          Length = 213

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 67/167 (40%), Gaps = 15/167 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L  +  +   +++ +   +Q+IP L  L   +  F           +L AI A+F
Sbjct: 35  VPLGVLLTRFPKAATIVIGLTSALQTIPSLALLALMIPLFGVG--------KLPAIIALF 86

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  + N+  +  +V++   ++ +Q  + + +P +MP ++  + ++    
Sbjct: 87  IYSLLPILRNTYIGMKNVDWNYRDVAKGMGMTEFQSIFSVELPIAMPTIMAGIRLAA--- 143

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +V+A   +    + I   G+G  I   +       IL   + +  
Sbjct: 144 -VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPDLILAGTIPVTI 186



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F +Q    ++  G   ++   + +II  II +P+G+ +   P  ++ +      L  
Sbjct: 1   MQQFFHQHGSEILSKGFEHLYISGLALIIGIIIAVPLGVLLTRFPKAATIVIGLTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++           L   + +   +   IL N   G      ++++VA    
Sbjct: 61  IPSLALLALMIPLFGVG----KLPAIIALFIYSLLPILRNTYIGMKNVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +T ++    + LP   P  + G   A     AW              ++   GLG  I  
Sbjct: 117 MTEFQSIFSVELPIAMPTIMAGIRLAAVYVIAWATL---------ASYIGAGGLGDLIFS 167

Query: 546 STEKGSFPEVVLGVL 560
                    ++ G +
Sbjct: 168 GLNNYQPDLILAGTI 182


>gi|107028484|ref|YP_625579.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686479|ref|YP_839726.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105897648|gb|ABF80606.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652194|gb|ABK12833.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 217

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ I  ++ ++P +   
Sbjct: 10  SWPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G        AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPLFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALHNVEAGVKEAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D+LL
Sbjct: 180 SMMKLLVGAVLVSLLAIVADRLL 202



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    ++ V + +  A +  +P+GI I     ++  +   A L+   P+   F 
Sbjct: 11  WPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   S +        ++  +   +   I+ N            KE  +   +T W+  
Sbjct: 71  LMIPLFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALHNVEAGVKEAGTGIGMTSWQRL 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA         ++ V   G       GLG  I  +  + S  +
Sbjct: 131 RLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQSSMMK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +++G +++    +  +R L
Sbjct: 184 LLVGAVLVSLLAIVADRLL 202


>gi|218895783|ref|YP_002444194.1| putative ABC transporter, permease protein [Bacillus cereus G9842]
 gi|218542266|gb|ACK94660.1| putative ABC transporter, permease protein [Bacillus cereus G9842]
          Length = 251

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 59  ATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 119 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 175 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 228

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 229 LAIFFVILI 237



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 56  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 116 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 168 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 221

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 222 PIVLLSLLAIFFVILI 237


>gi|312865294|ref|ZP_07725522.1| choline transport system permease protein opuBB [Streptococcus
           downei F0415]
 gi|311099405|gb|EFQ57621.1| choline transport system permease protein opuBB [Streptococcus
           downei F0415]
          Length = 212

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+   +L      T+  +  +   +++ I  ++Q+IP L  L   +  F          
Sbjct: 25  LALAFGILIAIPLGTVLTRFPKTAKIVIGITGMLQTIPSLALLAMMIPLFGVG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +  A+ A+F   +  +  + Y  L N+   L + ++   ++  Q    + +P +MP ++
Sbjct: 78  -KAPAVAALFIYSLLPILRNTYVGLQNVDPSLTDSAKGMGMAPLQSILQVELPLAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G  I   +       I+   L ++ +  
Sbjct: 137 TGIRLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPKLIIGGTLPVILLSL 189

Query: 254 LYDQLL 259
           + D LL
Sbjct: 190 VSDYLL 195



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 53/183 (28%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + +    +I IP+G  +   P  +  +     +L   P+     +++            
Sbjct: 24  ALALAFGILIAIPLGTVLTRFPKTAKIVIGITGMLQTIPSLALLAMMIPLFGVG----KA 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                +   +   IL N   G         + A    +   +    + LP   P  +TG 
Sbjct: 80  PAVAALFIYSLLPILRNTYVGLQNVDPSLTDSAKGMGMAPLQSILQVELPLAMPVIMTGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +       + ++     G       GLG  I           ++ G L +    L  +
Sbjct: 140 RLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPKLIIGGTLPVILLSLVSD 192

Query: 571 RFL 573
             L
Sbjct: 193 YLL 195


>gi|296113427|ref|YP_003627365.1| ABC transporter permease protein [Moraxella catarrhalis RH4]
 gi|295921121|gb|ADG61472.1| ABC transporter permease protein [Moraxella catarrhalis RH4]
          Length = 250

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 14/240 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + L+  +LVI    + +  + +  +P     +  +  D   L  +A  T        VI 
Sbjct: 11  YSLVLIILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIG 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L  +FV + L   SR     + P++ + Q+IP +      V++             L  +
Sbjct: 71  LALSFVLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGI--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S  + MT ++     ++  D   +  S + + +Q + +L +P +M      + ++
Sbjct: 123 VLVVLSVFFPMTIALLDGYRSVSTDELNLFYSMKANTYQTYRHLKIPSAMGYFFTGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +S      V +E +          G+G Y+    K  +L  +   +  +  +      L+
Sbjct: 183 LSYALISAVVAEWLGG------YYGLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  VV    +        + + H    D   +      T+    +  +I   +  
Sbjct: 16  IILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIGLALSF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +    +    + P   L    P     PL+V  + Y  L   + + L + F    
Sbjct: 76  VLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGILPKVVLVVLSVFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  S     ++ +R++ +P    Y+ TG   A   A  +++
Sbjct: 132 PMTIALLDGYRSVSTDELNLFYSMKANTYQTYRHLKIPSAMGYFFTGLKVALSYALISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E     +      GLG Y+    +      +   + ++    LAL   +
Sbjct: 192 VAEWLGGYY------GLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236


>gi|329296373|ref|ZP_08253709.1| taurine transporter subunit [Plautia stali symbiont]
          Length = 219

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 10/167 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLYVIWL 382
           +P +     S   V+ +L ++W     G+   +      Q +  ++     Q  +     
Sbjct: 19  WPFSRQLSLSLLSVAVLLLLWWGVTALGLIAPLFLPPPQQVLHKLLVIAGPQGFMDATLW 78

Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                ++ R++V +  A++I IPVGI +G  P +   + P  +L    P   + PL+V  
Sbjct: 79  QHLGASLTRMLVALFFAALIGIPVGIAMGLSPAVRGLLDPLIELYRPVPPLAYLPLMVIW 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                 +      LL+       +  + +AG           A +  
Sbjct: 139 FGIGETSK----ILLIYLAIFAPVTLSTLAGVKNTQQVRIRAAQALG 181



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 56/150 (37%), Gaps = 13/150 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            G+  + L        P+ ++  +     P      +L Q+   +  RML A+  + L  
Sbjct: 40  WGVTALGLIAPLFLPPPQQVLHKLLVIAGPQGFMDATLWQHLGASLTRMLVALFFAALIG 99

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                    S  +  +L P++++ + +P L +L   V++F           E + I  I+
Sbjct: 100 IPVGIAMGLSPAVRGLLDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILLIY 151

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +T S    + N  +     +++  
Sbjct: 152 LAIFAPVTLSTLAGVKNTQQVRIRAAQALG 181


>gi|301155501|emb|CBW14967.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 265

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I IA +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGIAIALVAGLAAGLIAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +  W+  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAMGMASVNKQHEELFDAYKLGLWKKIRYLYVPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+           G+GA IA++        V+  VL++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ANEGVGARIADARAMLDTSTVMAYVLLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 101/242 (41%), Gaps = 15/242 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V+ +      L G      P D+       LD          +  R +  + I+L+
Sbjct: 30  VAMMVVALWAWGSALFGEFMLPAPSDVFQKALELLDHFQ-QNEIGISLWRSVVGIAIALV 88

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +A   +    +L P++ I+ ++P + ++   + +F    P        + +F 
Sbjct: 89  AGLAAGLIAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP--------SVLFT 140

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I          S    + ++ +  EE+  +++L  W+K  YL VP     ++ ++ ++++
Sbjct: 141 IIVLVAPLTFASAAMGMASVNKQHEELFDAYKLGLWKKIRYLYVPHLTGYVISSIGVAVA 200

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G   V+ +E++   +      G+G+ IA A    D   ++  +L ++  + L++ L+ +
Sbjct: 201 MGVKVVIMAELLGANE------GVGARIADARAMLDTSTVMAYVLLVIVFVSLFEYLITK 254

Query: 262 PM 263
           P+
Sbjct: 255 PL 256


>gi|228983929|ref|ZP_04144119.1| ABC transporter, permease [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229154429|ref|ZP_04282546.1| ABC transporter, permease [Bacillus cereus ATCC 4342]
 gi|228628827|gb|EEK85537.1| ABC transporter, permease [Bacillus cereus ATCC 4342]
 gi|228775749|gb|EEM24125.1| ABC transporter, permease [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 247

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 5   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 63

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 64  VAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 119

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 120 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 179

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 180 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 233



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 52  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 111

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 112 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 163

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 164 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 217

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 218 PIVLLSLLAIFFVILI 233


>gi|154245728|ref|YP_001416686.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159813|gb|ABS67029.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 253

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 94/235 (40%), Gaps = 14/235 (5%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
            +    P  ++  +        L    + T  R+  + V+++    V      + RRL  
Sbjct: 31  SRALPTPEAVLAFLSKEAASGDLFSNLAVTLARVAVSFVVAMAIGTVIGVAFGRMRRLDR 90

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V    L ++ + P L       ++            E AA+ A+  +++  +   + +  
Sbjct: 91  VFDTWLVVLLNTPALVITVLCYIWLGL--------TETAAVLAVALNKIPTVAVLLREGA 142

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  +L+E++ +FRLS   +  ++ +P   P L       ++  W  V+  E++     
Sbjct: 143 RALSPELDEMAGAFRLSFLDRMRHVVLPQLEPHLAGAARSGLALVWKIVLVVELLG---- 198

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
                G+G  I++  +  D+ A+L   L  + V+   +  + +P    + ++RLE
Sbjct: 199 --RPNGVGYAISVYFQLFDVAAVLGYSLAFMAVMLAIEYGVLQPFEAHARRWRLE 251



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 10/207 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+ RV V  ++A  I   +G+  G    +      +  +L   PA V   L
Sbjct: 51  GDLFSNLAVTLARVAVSFVVAMAIGTVIGVAFGRMRRLDRVFDTWLVVLLNTPALVITVL 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +            L +       +   +  GA A   +  E+A +F ++     R+
Sbjct: 111 CYIWLGLTET----AAVLAVALNKIPTVAVLLREGARALSPELDEMAGAFRLSFLDRMRH 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P+    A +     W   +V E+        R  G+G  I+   +      V+
Sbjct: 167 VVLPQLEPHLAGAARSGLALVWKIVLVVELLG------RPNGVGYAISVYFQLFDVAAVL 220

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
              L     +LA+   +  P   +  R
Sbjct: 221 GYSLAFMAVMLAIEYGVLQPFEAHARR 247


>gi|254560933|ref|YP_003068028.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254268211|emb|CAX24143.1| ABC transporter permease component (subunit B) [Methylobacterium
           extorquens DM4]
          Length = 244

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 16/233 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +   +       SL      T  R+  + VI++    +      +SR    +
Sbjct: 27  RTLPAPSAVFAFILREAQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRL 86

Query: 100 LV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L  P+L ++ + P L       V+            E AAI A+  +++ N+   M +  
Sbjct: 87  LDTPLLVVLNT-PALVITVLAYVWLGL--------TETAAIVAVALNKLPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   LEE++ ++R        ++ +P   P +V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLEEMATTYRFDRRTWIAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I       D+ A++   L  + V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVMLALDSLLLQPLDSHVRRWR 244



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 10/204 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                + +   +T+ RV V  +IA  + + +GI +G        +     ++   PA V 
Sbjct: 43  AQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            + +       +   +  GA       +E+A+++      W
Sbjct: 103 TVLAYVWLGLTET----AAIVAVALNKLPNVAVIMREGARGLDPGLEEMATTYRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LP + P+ V  A +    AW   +V E+        R  G+G  I          
Sbjct: 159 IAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG------RPNGVGFAINYYFTLFDVT 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
            V+   L+    +LAL+  L  PL
Sbjct: 213 AVIGYSLVFMSVMLALDSLLLQPL 236


>gi|116255222|ref|YP_771055.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259870|emb|CAK02964.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 275

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 86/262 (32%), Gaps = 23/262 (8%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-----YQD 375
              R        ++         L      ++ G+ + + WQ + +I    T       D
Sbjct: 4   SEARSAPASTPRKVAILDATIGTLSRNLPAILAGLGLVVLWQVVIWIFKIPTFMAPSPAD 63

Query: 376 VLYVIWLGCITMFR--------VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V+        T++R          +  +  +++ I + +W            P A  + A
Sbjct: 64  VVLAFRDNAATLWRNFLPTLLEATLGFLFGNLVAILLAVWFVHSTTAEKAFYPIAVFIKA 123

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++V       L P + ++ L+ F   +  L N++ G  A      ++     
Sbjct: 124 IPIIALAPILVLIFGNG-LAPKIIIAGLICF---FPTLVNMVQGLRAASPAMLDLMRVLS 179

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T       +  P   P+       A   +   +IV+E          + GLGA I E+T
Sbjct: 180 ATNSEILWKVRFPSSLPFLFAALKIAATSSVMGAIVAEWIG------SSFGLGALIIEAT 233

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                P +   V+I     + L
Sbjct: 234 YNFRSPLLYATVVIAALLAVVL 255



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 15/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P I   L  V++  ++  +         P     ++    +  +L +    T L   
Sbjct: 29  RNLPAILAGLGLVVLWQVVIWIFKIPTFM-APSPADVVLAFRDNAATLWRNFLPTLLEAT 87

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +   L   + A     S        PI   +++IPI+      V+ F N    K+I 
Sbjct: 88  LGFLFGNLVAILLAVWFVHSTTAEKAFYPIAVFIKAIPIIALAPILVLIFGNGLAPKIII 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F            +M Q L      + ++ R    +  +  W +  P S+P L 
Sbjct: 148 AGLICFF--------PTLVNMVQGLRAASPAMLDLMRVLSATNSEILWKVRFPSSLPFLF 199

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E I          G+G+ I  A        +   ++    +  
Sbjct: 200 AALKIAATSSVMGAIVAEWIGSS------FGLGALIIEATYNFRSPLLYATVVIAALLAV 253

Query: 254 LYDQLL 259
           +   L+
Sbjct: 254 VLFALV 259


>gi|148546145|ref|YP_001266247.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148510203|gb|ABQ77063.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313497240|gb|ADR58606.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 237

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 87/237 (36%), Gaps = 30/237 (12%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R    +    A ++++ ++                + I  I      L  Y     +
Sbjct: 1   MAKRYGKGLLGWAAVLVILALLV-------------HWIGIDTIARYRDDLGFYLQAHLV 47

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +L++M  +L          ++  R+      +   ++  +IP L  L   +        
Sbjct: 48  LVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG 107

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AIFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P +
Sbjct: 108 P--------AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNA 159

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +P +V  + +++        A    ++G        +GS I   I   +   +L   
Sbjct: 160 VPIIVGGVRVAL--ALNVGTAPLAFLIGANS-----LGSLIFPGIALNNQPQLLLGA 209



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 18/215 (8%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  V+  +A+ + W  I  I     Y+D L       + +  V+  +  A  + IP GI 
Sbjct: 12  WAAVLVILALLVHWIGIDTIAR---YRDDLGFYLQAHLVL--VLASMAAALAVGIPAGIA 66

Query: 408 IGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +     +        F  +    P      + +S +              +   +   I+
Sbjct: 67  LSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG----PAIFALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G    P   KE A+   +T  +    + LP   P  V G   A       + ++ 
Sbjct: 123 RNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAPLAF 182

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           +            LG+ I       + P+++LG  
Sbjct: 183 LIG-------ANSLGSLIFPGIALNNQPQLLLGAA 210


>gi|315925502|ref|ZP_07921712.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621043|gb|EFV01014.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 212

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 14/194 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           M  V+V + + +   + +GI +   P  S  I P   +    P   F  ++        +
Sbjct: 20  MLYVMVSVALGAAAGMILGIVLSRVPKWSVVILPILSVFQTIPGLAFIGILFLITGMKPI 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + LS+ +IF     +L N  AG  +  + + E A    +T ++    + LP   P  
Sbjct: 80  TVIIALSVYVIF----PVLKNTYAGILSVEDKYVEAAKGCGMTSFQTLMRVELPLASPTI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMC 563
           + G   A     + ++++ +   G       GLG +I + T   +   ++LG +   ++ 
Sbjct: 136 IAGLRMAVIYTVSWAVLAAMIGLG-------GLGDFIYQGTTSNNNTLILLGAIPAAVIA 188

Query: 564 CFVLALNRFLWHPL 577
             +  +   L   L
Sbjct: 189 IVLGLIIDVLQKRL 202



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 76/197 (38%), Gaps = 15/197 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L        L ++ ++ +      +   + ++  +  +V++PIL + Q+IP L F+  
Sbjct: 10  SMLLSAIGTHMLYVMVSVALGAAAGMILGIVLSRVPKWSVVILPILSVFQTIPGLAFIGI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +              +  I A+    ++ +  + Y  + ++     E ++   ++ +Q
Sbjct: 70  LFLI--------TGMKPITVIIALSVYVIFPVLKNTYAGILSVEDKYVEAAKGCGMTSFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P ++  + M++     + V + MI +G       G+G +I       + 
Sbjct: 122 TLMRVELPLASPTIIAGLRMAVIYTVSWAVLAAMIGLG-------GLGDFIYQGTTSNNN 174

Query: 239 LAILYAMLTMLGVIFLY 255
             IL   +    +  + 
Sbjct: 175 TLILLGAIPAAVIAIVL 191


>gi|229149066|ref|ZP_04277307.1| ABC transporter, permease [Bacillus cereus m1550]
 gi|228634265|gb|EEK90853.1| ABC transporter, permease [Bacillus cereus m1550]
          Length = 250

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLTVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 236



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 221 PIVLLSLLAIFFVVII 236


>gi|154687510|ref|YP_001422671.1| OpuCB [Bacillus amyloliquefaciens FZB42]
 gi|154353361|gb|ABS75440.1| OpuCB [Bacillus amyloliquefaciens FZB42]
          Length = 217

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           + A+++ ++          + ++    ++  ++I+Q++P L
Sbjct: 8   LQTNGGELLYKTWEHLYISIIAVILGIVVAVPLGVALTRMKKGAGAVIGAVNIVQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ W++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTVWEQIRLVELPLAVPVIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D LL
Sbjct: 173 NLYQPEYIIGGAVPVTILAIIIDYLL 198



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +I+  ++ +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISIIAVILGIVVAVPLGVALTRMKKGAGAVIGAVNIVQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +T W   R + LP   P  
Sbjct: 81  --KVPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIGMTVWEQIRLVELPLAVPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 IIIDYLL 198


>gi|182420329|ref|ZP_02951556.1| ABC transporter, permease [Clostridium butyricum 5521]
 gi|237668977|ref|ZP_04528961.1| hydroxymethylpyrimidine ABC transporter, permease [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182375816|gb|EDT73410.1| ABC transporter, permease [Clostridium butyricum 5521]
 gi|237657325|gb|EEP54881.1| hydroxymethylpyrimidine ABC transporter, permease [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 247

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 91/247 (36%), Gaps = 15/247 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++  P+I      +L+   I +++        P  I+  +   L    L  +   T    
Sbjct: 2   KKNLPSIILTTILLLIWQGIAMIIDAHYILPSPVQIMSKL-YELREPLLKVHLPATMGVT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  ++IS++     A     + ++   L PI+   Q+IP        V++F         
Sbjct: 61  ILGLIISIVLGISLAVFMDINEKVANALYPIIIASQTIPTTAIAPLFVLWFGYGI----- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               + +        + +T ++Y    +  R++EE+  ++  +    F  L +P ++P  
Sbjct: 116 ---WSKVLVTILITFFPITITLYDGFKSTKREMEELLITYGANKKDIFIKLKIPSALPYF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++ M++         +E +          G+G +    + + D   +   ++ +  V 
Sbjct: 173 FSSIKMAIPLSIIGAAIAEWLG------AQSGLGYFSKRMMTQLDGAGVFAPIVLLSVVA 226

Query: 253 FLYDQLL 259
            +   L+
Sbjct: 227 MVLVYLV 233



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 68/189 (35%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            TM   ++ +II+ ++ I + +++     +++ + P        P     PL V    Y 
Sbjct: 55  ATMGVTILGLIISIVLGISLAVFMDINEKVANALYPIIIASQTIPTTAIAPLFVLWFGYG 114

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    L+ I  T + I   +  G  +   + +E+  ++       +  + +P   P
Sbjct: 115 ----IWSKVLVTILITFFPITITLYDGFKSTKREMEELLITYGANKKDIFIKLKIPSALP 170

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + ++E           +GLG +      +     V   ++++  
Sbjct: 171 YFFSSIKMAIPLSIIGAAIAEWLG------AQSGLGYFSKRMMTQLDGAGVFAPIVLLSV 224

Query: 565 FVLALNRFL 573
             + L   +
Sbjct: 225 VAMVLVYLV 233


>gi|119026169|ref|YP_910014.1| ABC transporter permease [Bifidobacterium adolescentis ATCC 15703]
 gi|118765753|dbj|BAF39932.1| possible permease protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 267

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 85/245 (34%), Gaps = 15/245 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R  P +  ++  ++V      L H           +    +     +L      T L
Sbjct: 13  MAKRRIPTLIAVITLLVVWEAWVRLGHVPSTMIAAPSEIAQATVETWP-TLWPATQVTLL 71

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
                 ++++    +   L   SR     L P+L   Q++P++      +++F     GK
Sbjct: 72  EGTVGFLLAVACGILIGILLYCSRVANAALFPLLSAAQTMPLISIAPLFLIWFGFEVSGK 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +  
Sbjct: 132 --------IVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATRAWTLWHVKLRVAAR 183

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + +S +  +     +E +          G+G ++  A        I  A L ++ 
Sbjct: 184 QIYGGIRVSAAYIFATATTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATLVIIV 237

Query: 251 VIFLY 255
           +  + 
Sbjct: 238 ITGIL 242



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  + +  AW  +G++ +            T +    +     +T+    V  ++A 
Sbjct: 22  IAVITLLVVWEAWVRLGHVPSTMIAAPSEIAQATVETWPTLWPATQVTLLEGTVGFLLAV 81

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++ + P        P     PL +    +      + +++  +F
Sbjct: 82  ACGILIGILLYCSRVANAALFPLLSAAQTMPLISIAPLFLIWFGFEVSGKIVIVAVFGLF 141

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 142 ----PIAVQTVRGLEAVPQFYSDVALTCGATRAWTLWHVKLRVAARQIYGGIRVSAAYIF 197

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    L++      L
Sbjct: 198 ATATTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIVITGIL 242


>gi|260495111|ref|ZP_05815240.1| glycine betaine transport system permease [Fusobacterium sp.
           3_1_33]
 gi|260197554|gb|EEW95072.1| glycine betaine transport system permease [Fusobacterium sp.
           3_1_33]
          Length = 513

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ RR   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHILISLLAISIASVLGIILGIIISEYRRFSGLILGTVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  + NI   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIAILALVFDFIL 199



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRRFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + LP   P  ++G         N   ++   +  
Sbjct: 104 GIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  Y     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNYKRIKYKI 216


>gi|228989554|ref|ZP_04149538.1| ABC transporter, permease protein [Bacillus pseudomycoides DSM
           12442]
 gi|228770091|gb|EEM18671.1| ABC transporter, permease protein [Bacillus pseudomycoides DSM
           12442]
          Length = 244

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 49  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRVLINPLLVISQTIPIVVLAPLFIIWFGYG- 107

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 108 ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMRATKWQIYQKVKFPAVLPY 164

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  G+  +   
Sbjct: 165 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GIAAIIVM 217

Query: 566 VLALNRFL 573
           V  L  F+
Sbjct: 218 VTLLLYFI 225



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ I   ++ L  I+   +P+    +  +      L     +T   ++  +  ++L
Sbjct: 3   WLILLISIWEGSVSLFRIEPWILPKPSTIVQELIGMKDLLLPNTMQTLQEVIIGLFFAIL 62

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +        +++ P+L I Q+IPI+      +++F      KV+   L   F 
Sbjct: 63  LGTSIAIIMDVIPLFRVLINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVILVCFF- 121

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  S+ +    + +++ ++ ++ R + WQ +  +  P  +P     + ++++
Sbjct: 122 -------PIALSILEGFQTVDKNMLKLLQTMRATKWQIYQKVKFPAVLPYFFSGLKIAVT 174

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  E +   +      G+G  +  A K   L A ++ +  ++ ++ L    +
Sbjct: 175 YSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTARVFGIAAIIVMVTLLLYFI 225


>gi|34557488|ref|NP_907303.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483205|emb|CAE10203.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 270

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 73/187 (39%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + +II+ ++ + +G+ +G  P++ + + PF    +  P     P++      
Sbjct: 73  AASLERLGLGVIISVLLGLLIGVPLGLIPYLRAGLSPFVAAFSMVPPMAILPILFIIFGM 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+       L++ G    I  ++       P +    A +   + W     ++LP +F
Sbjct: 133 GELSK----VALIVIGVTPLIARDMQQRVQELPLEQLIKAQTLGGSTWNIALRVVLPQVF 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +       + GLG  I       S   ++  V+ + 
Sbjct: 189 PRLLDAVRLTLGTAWIFLISAEAIA------SSEGLGYRIFLVRRYLSMDVILPYVVWIT 242

Query: 564 CFVLALN 570
               AL+
Sbjct: 243 LLAFALD 249



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 14/213 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + +  R+   ++IS+L   +          L   L P +     +P +  L    + F 
Sbjct: 72  TAASLERLGLGVIISVLLGLLIGVPLGLIPYLRAGLSPFVAAFSMVPPMAILPILFIIFG 131

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   M Q +  +P +    +++   S W     + 
Sbjct: 132 MG--------ELSKVALIVIGVTPLIARDMQQRVQELPLEQLIKAQTLGGSTWNIALRVV 183

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P   P L+  + +++   W F++++E I   +      G+G  I L  +   +  IL  
Sbjct: 184 LPQVFPRLLDAVRLTLGTAWIFLISAEAIASSE------GLGYRIFLVRRYLSMDVILPY 237

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           ++ +  + F  D  + R        ++  R   
Sbjct: 238 VVWITLLAFALDFSIKRLTYALFPWYKAGREES 270


>gi|94985512|ref|YP_604876.1| binding-protein-dependent transport systems inner membrane
           component [Deinococcus geothermalis DSM 11300]
 gi|94555793|gb|ABF45707.1| ABC transporter, permease, aliphatic sulfonate [Deinococcus
           geothermalis DSM 11300]
          Length = 277

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+L     ++L   V   L    R L   +   L  +QS+P + F+ F
Sbjct: 73  GKLLTAIGNSLRRVLIGYASAVLLGGVVGLLMGAWRPLRDTVGAYLTGIQSVPSIAFVPF 132

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E A +F +       +  ++  +L N+   L    R+    G  
Sbjct: 133 AILFFGLN--------ERAVLFVVILEGFIPVALAVSGALMNVSPALRIAGRTLGARGLD 184

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P ++  +  + S  W  +V  E++V G        +G+ + +     ++
Sbjct: 185 LTTGVLLPASVPSILTGLRTAWSFAWRALVGGELLVSGSAS-----LGAQLEVGRNTANM 239

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++  +L +  +  L+D LL
Sbjct: 240 ALVIATILIIGIIGGLFDALL 260



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 71/215 (33%), Gaps = 10/215 (4%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             W  I Y +     QD   ++     ++ RV++    A ++   VG+ +G    +   +
Sbjct: 56  AVWTEISYGLWGNGPQD-GKLLTAIGNSLRRVLIGYASAVLLGGVVGLLMGAWRPLRDTV 114

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             +   + + P+  F P  +             +  ++I      +   V          
Sbjct: 115 GAYLTGIQSVPSIAFVPFAILFFGL----NERAVLFVVILEGFIPVALAVSGALMNVSPA 170

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +    +    G      ++LP   P  +TG  TA   AW A +  E+   G        
Sbjct: 171 LRIAGRTLGARGLDLTTGVLLPASVPSILTGLRTAWSFAWRALVGGELLVSGSAS----- 225

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LGA +       +   V+  +LI+       +  L
Sbjct: 226 LGAQLEVGRNTANMALVIATILIIGIIGGLFDALL 260


>gi|213158534|ref|YP_002319832.1| aliphatic sulfonates transport permease protein [Acinetobacter
           baumannii AB0057]
 gi|213057694|gb|ACJ42596.1| aliphatic sulfonates transport permease protein [Acinetobacter
           baumannii AB0057]
          Length = 142

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 66/137 (48%), Gaps = 7/137 (5%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E + I  I     +    +   ++ N+ + L EV + +RL+ +Q+   + +P + PG++ 
Sbjct: 8   EGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISIILPAASPGILT 67

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  S+S  W F++A+E+I          GIG  ++   +      ++ A++ +  +  +
Sbjct: 68  GLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRETSRPDIVIIAIILLALLGKI 121

Query: 255 YDQLLFRPMIVWSNKFR 271
            D L+ + +  W  ++R
Sbjct: 122 TDTLM-KLIENWLLRWR 137



 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+  G  +    N +A          EV   + +  ++    IILP   P  +TG   
Sbjct: 12  ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISIILPAASPGILTGLRN 71

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +   +W   I +E+ +       T G+G  +++  E
Sbjct: 72  SLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 101


>gi|190894908|ref|YP_001985201.1| putative glycine betaine/L-proline ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700569|gb|ACE94651.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 283

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   + +T   +  A+VIS+L  F    L ++ + L   + P+LD+MQ++P   +L   
Sbjct: 86  GLWTASMQTLALVTVAVVISVLIAFPIGVLCSRYKTLEAAVRPVLDVMQTVPPWVYLIPA 145

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F            + AI A     +  M      +   +P+   E+  +        
Sbjct: 146 VMIFSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPKVFIELGSAIGAPPRSI 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P +   L+  +   +      VV + ++  G            +   +   ++ 
Sbjct: 198 LWKIEMPLAKQTLLVGLNQCILLSLAMVVLAGLVGAGGLGAE-------VTRGLTRMEMG 250

Query: 240 AILYAMLTMLGVIFLYDQL 258
             L A L ++ V  L D+L
Sbjct: 251 LGLRAGLAIVAVALLLDRL 269



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 4/125 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V V ++I+ +I  P+G+       + + ++P   ++   P  V+    V   S   
Sbjct: 94  TLALVTVAVVISVLIAFPIGVLCSRYKTLEAAVRPVLDVMQTVPPWVYLIPAVMIFSLGR 153

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   +   +  I      +L       +  P  F E+ S+           I +P     
Sbjct: 154 VPAIIATIVYGI----PPMLRLTTLAFNQVPKVFIELGSAIGAPPRSILWKIEMPLAKQT 209

Query: 506 YVTGA 510
            + G 
Sbjct: 210 LLVGL 214


>gi|300717296|ref|YP_003742099.1| ABC transporter permease [Erwinia billingiae Eb661]
 gi|299063132|emb|CAX60252.1| ABC transporter, permease component [Erwinia billingiae Eb661]
          Length = 255

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 19/250 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + V   I            P  + D+  +      L  +   T   ++S +V  +L
Sbjct: 19  FIGLIAVWWAITRSGVPAFLLPTPMSVADV--LWTSRAYLAAHTLVTAAEIVSGLVAGVL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A     S RL   L+P++   Q+IP+       V++F      KV  A L   F 
Sbjct: 77  LGAILALCMMFSPRLQRWLMPLVLTSQAIPVFALAPLLVLWFGFGISAKVAMAVLVIFF- 135

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T + +  L  +  D  +++R+   S W    ++ +  ++P     + M+ +
Sbjct: 136 -------PVTSAFFDGLRRVNNDFLDLARTMGASRWALLRHVRLMAALPAFGSGLRMAAA 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259
                 +  E +  G+      G+G  +  A           A+  ++ +  L    +  
Sbjct: 189 VAPIGAIIGEWVGAGE------GLGYVMLNANARMQTELCFAALFILVLMTLLLWLAVDS 242

Query: 260 -FRPMIVWSN 268
             R +I W+ 
Sbjct: 243 ALRRLIRWAP 252



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 81/219 (36%), Gaps = 12/219 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ ++W     GV   +    +   V    +    Y+     +T   +V  ++   ++  
Sbjct: 22  LIAVWWAITRSGVPAFLLPTPMS--VADVLWTSRAYLAAHTLVTAAEIVSGLVAGVLLGA 79

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + + F P +   + P      A P     PL+V     + ++  + +++L+IF   +
Sbjct: 80  ILALCMMFSPRLQRWLMPLVLTSQAIPVFALAPLLVLWFG-FGISAKVAMAVLVIF---F 135

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +      G     NDF ++A +   + W   R++ L    P + +G   A   A   +I
Sbjct: 136 PVTSAFFDGLRRVNNDFLDLARTMGASRWALLRHVRLMAALPAFGSGLRMAAAVAPIGAI 195

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + E    G       GLG  +  +  +         + I
Sbjct: 196 IGEWVGAGE------GLGYVMLNANARMQTELCFAALFI 228


>gi|291288082|ref|YP_003504898.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885242|gb|ADD68942.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 256

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 85/245 (34%), Gaps = 10/245 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +  S       L + W  +   +   +       +++               +T++R+  
Sbjct: 12  KWVSTSVGVLALIVCWQVLSLFLHEIVVASPSDTLISLIRLLSDDEFYHSLFLTVYRLFA 71

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            I+  S+  + +GI  G    + + ++PF  +L + P  +   L +              
Sbjct: 72  GILAGSMAGLILGIAAGLNNTLKNILEPFGWVLMSIPPVIVTMLAMLWFGMGSFMVIFIA 131

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           SLL++     ++ FN + G     ++   +A  +    +   R+I LP I  + + G   
Sbjct: 132 SLLLVP----FVYFNALKGMEMVDDNLLSMAKLYKYNFFMLLRHIYLPAISSHVLAGMTI 187

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G      +++E+         + G+G  +  +        +    ++       L   
Sbjct: 188 VMGSGIRVVVLAELLG------ASDGIGFEVVTARSSIEVESIFAWAVVTLLIAACLEYV 241

Query: 573 LWHPL 577
           + +P+
Sbjct: 242 VLNPI 246



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 102/269 (37%), Gaps = 15/269 (5%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           + + +   +S +       +LA ++   ++++ LH I     P D +  +   L      
Sbjct: 1   MTDRIYRIVSEKWVSTSVGVLALIVCWQVLSLFLHEIV-VASPSDTLISLIRLLSDDEFY 59

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                T  R+ + ++   +   +    A  +  L  +L P   ++ SIP +      +++
Sbjct: 60  HSLFLTVYRLFAGILAGSMAGLILGIAAGLNNTLKNILEPFGWVLMSIPPVIVTMLAMLW 119

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F               IF      V  + F+  + +  +  +L  +++ ++ + +    +
Sbjct: 120 FGMG--------SFMVIFIASLLLVPFVYFNALKGMEMVDDNLLSMAKLYKYNFFMLLRH 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P     ++  M + M  G   VV +E++   D      GIG  +  A    ++ +I 
Sbjct: 172 IYLPAISSHVLAGMTIVMGSGIRVVVLAELLGASD------GIGFEVVTARSSIEVESIF 225

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
              +  L +    + ++  P+     +++
Sbjct: 226 AWAVVTLLIAACLEYVVLNPIQKRILRWK 254


>gi|315186604|gb|EFU20363.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta thermophila DSM 6578]
          Length = 271

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 80/233 (34%), Gaps = 15/233 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R         +  + V    + L             V +  +      LP +   T L  
Sbjct: 6   RSTGSPFLTTVGLLAVWEAASRLGAVSPFLLPAPSAVVVELVRQAPLLLP-HLGATLLSG 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   ++ +      A +     RL   L P+L I Q+IPI+      +++F      K++
Sbjct: 65  LGGFLVGVFLGVGLALVLDAFPRLRASLYPLLVISQTIPIIFLYPLFLIWFGYGLTSKLM 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +          S+   L ++  +L ++  S R   W  FW +  P ++P L
Sbjct: 125 VVVLVCFFPVIV--------SLLDGLASVDPELLDLFTSMRAGWWYTFWLVRFPSALPSL 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
              + +S +      V  E +          G+G Y+  A K      +  A+
Sbjct: 177 FSGLTVSATYSIMGAVIGEWLG------APRGLGVYMLRAYKTFSTARVFAAI 223



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/232 (10%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
             ++    S    +  L   W       A+          V     +    ++     T+
Sbjct: 2   RRSWRSTGSPFLTTVGLLAVWEAASRLGAVSPFLLPAPSAVVVELVRQAPLLLPHLGATL 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +   ++   + + + + +   P + + + P   +    P    +PL +    Y   +
Sbjct: 62  LSGLGGFLVGVFLGVGLALVLDAFPRLRASLYPLLVISQTIPIIFLYPLFLIWFGYGLTS 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 ++++    + ++ +++ G ++   +  ++ +S     W  +  +  P   P   
Sbjct: 122 K----LMVVVLVCFFPVIVSLLDGLASVDPELLDLFTSMRAGWWYTFWLVRFPSALPSLF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           +G   +   +   +++ E            GLG Y+  + +  S   V   +
Sbjct: 178 SGLTVSATYSIMGAVIGEWLG------APRGLGVYMLRAYKTFSTARVFAAI 223


>gi|253577122|ref|ZP_04854443.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843504|gb|EES71531.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 277

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 20/254 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQET------TVPRDIVDIVPITLDVHSLPQYA 65
            RR+   +  + A +LV+ +    L G          + P  +   +        L  + 
Sbjct: 27  KRRMSNYVVGVQALILVLFVGLWELAGRLRWIDVLIFSYPSKVGQQIVKDAVSGELWPHL 86

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T        ++  L   + A L   S  L  VL P + +  S+P +      +V F  
Sbjct: 87  AMTVGETAVGFLLGTLIGTLLAVLIWWSPFLSRVLDPYMVVFNSMPKVALGPIFIVLFGA 146

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +         A +    +  V   T  ++ S   +  +L +V R+F  +    F    +
Sbjct: 147 GFT--------AIVVTTLSITVIVTTLVVFNSFNEVDANLVKVIRTFGGTRRAVFMKAIL 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S P +V  + +++   W  V+  E +V         G+G  I    +  +   +L ++
Sbjct: 199 PASFPTIVSTLKVNVGMAWVGVIVGEFLVAKI------GLGYLIVYGFQVFNFTLVLSSL 252

Query: 246 LTMLGVIFLYDQLL 259
           + +  V     QL+
Sbjct: 253 VIIAIVATAMYQLV 266



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 12/191 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+    V  ++ ++I   + + I + P +S  + P+  +  + P     P+ +     
Sbjct: 87  AMTVGETAVGFLLGTLIGTLLAVLIWWSPFLSRVLDPYMVVFNSMPKVALGPIFIVLFGA 146

Query: 444 YHLNPNL-WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 +  LS+ +I  T   ++FN     +    +  +V  +F  T    +   ILP  
Sbjct: 147 GFTAIVVTTLSITVIVTTL--VVFNS---FNEVDANLVKVIRTFGGTRRAVFMKAILPAS 201

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  V+      G AW   IV E        +   GLG  I    +  +F  V+  ++I+
Sbjct: 202 FPTIVSTLKVNVGMAWVGVIVGEFL------VAKIGLGYLIVYGFQVFNFTLVLSSLVII 255

Query: 563 CCFVLALNRFL 573
                A+ + +
Sbjct: 256 AIVATAMYQLV 266


>gi|188581012|ref|YP_001924457.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179344510|gb|ACB79922.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 244

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 100/258 (38%), Gaps = 17/258 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +   +F L   + +   +++     +    P  ++  +       SL      T  R+  
Sbjct: 3   LLARLFSLAVLLALWQGVSVYAD-TRTLPAPSAVLAFILREAQSGSLFFNVGVTLGRVAV 61

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           + VI++    +      +SR    +L  P+L ++ + P L       V+           
Sbjct: 62  SFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNT-PALVITVLAYVWLGL-------- 112

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E AAI A+  +++ N+   M +    +   LEE+++++R        ++ +P   P +V
Sbjct: 113 TETAAIVAVALNKLPNVAVIMREGARGLDPGLEEMAKTYRFDRRTWTAHVLLPQLQPFMV 172

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 +S  W  V+  E++          G+G  I       D+ A++   L  + V+ 
Sbjct: 173 AAARSGISLAWKIVLVVELLG------RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVML 226

Query: 254 LYDQLLFRPMIVWSNKFR 271
             D LL +P+     ++R
Sbjct: 227 AIDALLLQPLDAHVRRWR 244



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 80/241 (33%), Gaps = 10/241 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W  V               +           + +   +T+ RV V  +IA  + +
Sbjct: 12  VLLALWQGVSVYADTRTLPAPSAVLAFILREAQSGSLFFNVGVTLGRVAVSFVIAMSLGV 71

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI +G        +     ++   PA V   L    +            + +      
Sbjct: 72  LLGIALGRSRLADRLLDTPLLVVLNTPALVITVLAYVWLGLTET----AAIVAVALNKLP 127

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  GA       +E+A ++      W  +++LP + P+ V  A +    AW   +
Sbjct: 128 NVAVIMREGARGLDPGLEEMAKTYRFDRRTWTAHVLLPQLQPFMVAAARSGISLAWKIVL 187

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
           V E+        R  G+G  I           V+   L+    +LA++  L  PL  +  
Sbjct: 188 VVELLG------RPNGVGFAINYYFTLFDVTAVIGYSLVFMSVMLAIDALLLQPLDAHVR 241

Query: 583 R 583
           R
Sbjct: 242 R 242


>gi|326803526|ref|YP_004321344.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650611|gb|AEA00794.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Aerococcus urinae ACS-120-V-Col10a]
          Length = 223

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 73/215 (33%), Gaps = 16/215 (7%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ + Y  +  +   +        + ++      I A ++ IP+G +I  R  +++ + 
Sbjct: 9   VWQQLLYYYSENSSYVISQFFQQMLMALY----GTIFACLLAIPLGFYIARREKLANVVI 64

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   PA     +++  +       +  + L +   +   IL N   G        
Sbjct: 65  SIANIIQTVPALALLSVLMLYLGLG----SNLVVLTVFLYSLLPILRNTYTGVRNIDAGI 120

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +V     +T  +    +  P  FP  + G   A   A   + +      G       GL
Sbjct: 121 IDVGKGMGMTKMQVILKVEFPLAFPVILGGIRNAFITAIGIATIGTFVGAG-------GL 173

Query: 540 GAYIAESTEKGS-FPEVVLGVLIMCCFVLALNRFL 573
           G+ +            ++ GV+ +    +  +  +
Sbjct: 174 GSILTRGVNASEGTSIILAGVIPIALMSIVADYLM 208



 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 81/208 (38%), Gaps = 19/208 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +  L  L   + + L         A+  +L  V++ I +I+Q++P L  L+  ++Y   
Sbjct: 29  FQQMLMALYGTIFACLLAIPLGFYIARREKLANVVISIANIIQTVPALALLSVLMLYLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  + NI   + +V +   ++  Q    +  
Sbjct: 89  G--------SNLVVLTVFLYSLLPILRNTYTGVRNIDAGIIDVGKGMGMTKMQVILKVEF 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  +  +      F+ A  +  +G   +   G+GS +   +   +  +I+ A 
Sbjct: 141 PLAFPVILGGIRNA------FITAIGIATIGTF-VGAGGLGSILTRGVNASEGTSIILAG 193

Query: 246 LT----MLGVIFLYDQLLFRPMIVWSNK 269
           +     M  V     +LL R +   ++K
Sbjct: 194 VIPIALMSIVADYLMELLERRLSPNASK 221


>gi|227550870|ref|ZP_03980919.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecium TX1330]
 gi|227179968|gb|EEI60940.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecium TX1330]
          Length = 225

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 29  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 89  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 141 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 193

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 194 ALPTALMAIITDWLL 208



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 23  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 83  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 139 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 191

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 192 AGALPTALMAIITDWLL 208


>gi|75762113|ref|ZP_00742016.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74490394|gb|EAO53707.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 251

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 59  ATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 119 ----IWSKVVITVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 175 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 228

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 229 LAIFFVILI 237



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 56  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 116 GY--------TIWSKVVITVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 168 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 221

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 222 PIVLLSLLAIFFVILI 237


>gi|160942225|ref|ZP_02089534.1| hypothetical protein CLOBOL_07111 [Clostridium bolteae ATCC
           BAA-613]
 gi|158434782|gb|EDP12549.1| hypothetical protein CLOBOL_07111 [Clostridium bolteae ATCC
           BAA-613]
          Length = 274

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 73/203 (35%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +      +     +T+   ++   + +I  +   + +     ++  ++PF  LL + P 
Sbjct: 71  VSMAKDGSLFLHTGVTLMETLISFAVCTIFGLACALLLWSSKSVAQVLEPFLVLLNSLPK 130

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +        +    + +FG+    +  +  G S    +  ++  S     
Sbjct: 131 SALAPLLIVWLGNNMRTIVVAAVSVAVFGS----ILTLYTGFSQMDTEQIKLIYSLGGGR 186

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LPG  P  ++      G      I+ E  S         GLG  I   ++  
Sbjct: 187 KDVLLKVLLPGSLPLVISNMKVNIGLCLVGVIIGEFLS------AKAGLGYLITYGSQTF 240

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           +   VV  ++I+C     L + +
Sbjct: 241 AMTMVVTSIVILCIVSGVLYQII 263



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T +  L +  +  +F    A L   S+ +  VL P L ++ S+P       
Sbjct: 77  GSLFLHTGVTLMETLISFAVCTIFGLACALLLWSSKSVAQVLEPFLVLLNSLPKSALAPL 136

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+  N     V+ A   A+F            ++Y     +  +  ++  S       
Sbjct: 137 LIVWLGNNMRTIVVAAVSVAVFGSI--------LTLYTGFSQMDTEQIKLIYSLGGGRKD 188

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P ++ NM +++      V+  E +          G+G  I    +   +
Sbjct: 189 VLLKVLLPGSLPLVISNMKVNIGLCLVGVIIGEFLSAKA------GLGYLITYGSQTFAM 242

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++ +++ +  V  +  Q++
Sbjct: 243 TMVVTSIVILCIVSGVLYQII 263


>gi|308175126|ref|YP_003921831.1| Glycine betaine/carnitine/choline transport system permease opuCB
           [Bacillus amyloliquefaciens DSM 7]
 gi|307607990|emb|CBI44361.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Bacillus amyloliquefaciens DSM 7]
 gi|328555095|gb|AEB25587.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Bacillus amyloliquefaciens TA208]
 gi|328913450|gb|AEB65046.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Bacillus amyloliquefaciens LL3]
          Length = 217

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           + A+++ +L          + ++    ++  ++I+Q++P L
Sbjct: 8   LQTNGGELLYKTWEHLYISIIAVILGILVAVPLGVALTRMKKGAGAVIGAVNIVQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KMPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ W++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTVWEQIRLVELPLAIPVIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D LL
Sbjct: 173 NLYQPEYIIGGAVPVTILAIIIDYLL 198



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +I+  ++ +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISIIAVILGILVAVPLGVALTRMKKGAGAVIGAVNIVQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +T W   R + LP   P  
Sbjct: 81  --KMPAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIGMTVWEQIRLVELPLAIPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 IIIDYLL 198


>gi|325579276|ref|ZP_08149232.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Haemophilus parainfluenzae ATCC 33392]
 gi|325159511|gb|EGC71645.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Haemophilus parainfluenzae ATCC 33392]
          Length = 265

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I IA +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGITIALVAGLAAGLIAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +  W+  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAMGMASVNKQHEELFDAYKLGLWKKIRYLYVPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+           G+GA IA++        V+  VL++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ANEGVGAQIADARAMLDTSTVMAYVLLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 90/196 (45%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + I+L+       +A   +    +L P++ I+ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGITIALVAGLAAGLIAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L  W+K  YL VP 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAMGMASVNKQHEELFDAYKLGLWKKIRYLYVPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ ++++ G   V+ +E++   +      G+G+ IA A    D   ++  +L 
Sbjct: 187 LTGYVISSIGVAVAMGVKVVIMAELLGANE------GVGAQIADARAMLDTSTVMAYVLL 240

Query: 248 MLGVIFLYDQLLFRPM 263
           ++  + L++ L+ +P+
Sbjct: 241 VIVFVSLFEYLITKPL 256


>gi|261418068|ref|YP_003251750.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y412MC61]
 gi|319767973|ref|YP_004133474.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y412MC52]
 gi|261374525|gb|ACX77268.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y412MC61]
 gi|317112839|gb|ADU95331.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y412MC52]
          Length = 269

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 16/228 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I  +    +  HSL  +   T    L    I      +   L     RL   L P
Sbjct: 56  SSPSAIAKLFVEKMSDHSLFAHTWATLFETLLGFFIGTAGGALIGALLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNI 161
            L +  ++P +      +V          +G  L +I A+     +   T  +Y +   +
Sbjct: 116 YLVVFNAMPKVALGPILIVA---------LGPGLTSIVAMGVVISIIITTIVVYSAFQEV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  +V R+F  + +Q F    +P S P ++  + +++   W  V+  E +V       
Sbjct: 167 DPNYLKVLRTFGATRYQCFQEAVLPASFPAIISTLKVNVGLAWVGVITGEFLV------S 220

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G  I    +  +   +L ++L +  +  L  QL+      W N+
Sbjct: 221 KQGLGYLIIYGFQVFNFTLVLMSLLIVALLSTLMYQLVALIEKKWGNR 268



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+F  ++   I +     +G  + + P ++  + P+  +  A P     P+++  +   
Sbjct: 80  ATLFETLLGFFIGTAGGALIGALLWWFPRLAKTLDPYLVVFNAMPKVALGPILIVALGPG 139

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    +  + +  +       V +       ++ +V  +F  T ++ ++  +LP  FP
Sbjct: 140 LTS----IVAMGVVISIIITTIVVYSAFQEVDPNYLKVLRTFGATRYQCFQEAVLPASFP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G AW   I  E        +   GLG  I    +  +F  V++ +LI+  
Sbjct: 196 AIISTLKVNVGLAWVGVITGEFL------VSKQGLGYLIIYGFQVFNFTLVLMSLLIVAL 249

Query: 565 FVLALNRFL 573
               + + +
Sbjct: 250 LSTLMYQLV 258


>gi|86361039|ref|YP_472926.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285141|gb|ABC94199.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 293

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLFAEYIM 274



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 80/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
             +  A+L ++ V    +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDT 292


>gi|269123256|ref|YP_003305833.1| binding-protein-dependent transport systems inner membrane
           component [Streptobacillus moniliformis DSM 12112]
 gi|268314582|gb|ACZ00956.1| binding-protein-dependent transport systems inner membrane
           component [Streptobacillus moniliformis DSM 12112]
          Length = 249

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 96/254 (37%), Gaps = 17/254 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + L+  +++   +    + + +  +P  I  +     D   + ++   T +   S + +
Sbjct: 10  RYYLIFLLIITWQLLSTFNVVPKFLLPSPIDVVNAFIKDFSLIMKHTKYTIIEAFSGLFL 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             LF F+ + +  +   +    +P+L I Q+IP +      V++F      K        
Sbjct: 70  GTLFAFILSIIMDRFDFMYKTTMPMLIITQTIPTVAIAPLLVLWFGYGMSSK-------- 121

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +  +  + +T ++     ++ ++   + +S   +  Q++ ++ +P S+        +
Sbjct: 122 ILLVIITTFFPITVALLDGYRSVDKESLILLKSMGANKLQEYVHVKLPSSLNYFFAGFRI 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+S      V +E +          G+G Y+    K      +   +  +  +      L
Sbjct: 182 SVSYSLIGAVVAEWLGG------FYGLGVYMTRVRKSYSFDKMFAVIFFISALSLFLITL 235

Query: 259 ---LFRPMIVWSNK 269
              L + ++ W  K
Sbjct: 236 VSKLEKYIVKWEEK 249



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + ++L I W  +     +          V +   +D   ++     T+      + + ++
Sbjct: 13  LIFLLIITWQLLSTFNVVPKFLLPSPIDVVNAFIKDFSLIMKHTKYTIIEAFSGLFLGTL 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
               + I +     +     P   +    P     PL+V    Y   +      LL+I  
Sbjct: 73  FAFILSIIMDRFDFMYKTTMPMLIITQTIPTVAIAPLLVLWFGYGMSSK----ILLVIIT 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I   ++ G  +   +   +  S      + + ++ LP    Y+  G   +   +  
Sbjct: 129 TFFPITVALLDGYRSVDKESLILLKSMGANKLQEYVHVKLPSSLNYFFAGFRISVSYSLI 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++V+E     +      GLG Y+    +  SF ++   +  +    L L   +
Sbjct: 189 GAVVAEWLGGFY------GLGVYMTRVRKSYSFDKMFAVIFFISALSLFLITLV 236


>gi|183602380|ref|ZP_02963746.1| possible permease protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|183218299|gb|EDT88944.1| possible permease protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
          Length = 264

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 89/255 (34%), Gaps = 15/255 (5%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M  +   P   + R +P +  ++A +L+  +     H           +    I +   +
Sbjct: 1   MRNHTDRPRRQAWRHWPTVVTVVALLLIWQVWVDAAHPPVTMVSSPTQIVRSAI-ISWPT 59

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T +  +    I+ +   +       SR     L P+L   Q++P++      +
Sbjct: 60  LWPATCMTFIEGVCGFAIACVLGVLLGIGIHCSRTAYAALFPLLTAAQTLPLISIAPLFL 119

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F     GK++   + AIF         +     + L  +P   ++V+ +   S     
Sbjct: 120 IWFGFEPVGKIVIVAVFAIF--------PIVVQTMRGLAAVPAFYDDVAMTCGASRAWTL 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +++ +  +   +   + +S +  +     +E +          G+G ++  A        
Sbjct: 172 FHVDLRVAARQIFGGVRVSAAYVFATAATAEYLG------ARSGLGIWLQAAYNSFQTPR 225

Query: 241 ILYAMLTMLGVIFLY 255
           I  A   ++ +  L 
Sbjct: 226 IFAATFVIIIMTGLL 240



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 74/244 (30%), Gaps = 23/244 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------------DVLYVIWLGCI 385
           R        W  VV  VA+ + WQ      +                      +    C+
Sbjct: 7   RPRRQAWRHWPTVVTVVALLLIWQVWVDAAHPPVTMVSSPTQIVRSAIISWPTLWPATCM 66

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T    V    IA ++ + +GI I       + + P        P     PL +    +  
Sbjct: 67  TFIEGVCGFAIACVLGVLLGIGIHCSRTAYAALFPLLTAAQTLPLISIAPLFLIWFGFEP 126

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   + +++  IF     I+   + G +A P  + +VA +   +      ++ L      
Sbjct: 127 VGKIVIVAVFAIF----PIVVQTMRGLAAVPAFYDDVAMTCGASRAWTLFHVDLRVAARQ 182

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   +    +  +  +E           +GLG ++  +      P +     ++   
Sbjct: 183 IFGGVRVSAAYVFATAATAEYLG------ARSGLGIWLQAAYNSFQTPRIFAATFVIIIM 236

Query: 566 VLAL 569
              L
Sbjct: 237 TGLL 240


>gi|261251981|ref|ZP_05944555.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio orientalis CIP 102891]
 gi|260938854|gb|EEX94842.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Vibrio orientalis CIP 102891]
          Length = 266

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITL 56
           + +         +   P    +++ ++++G+   ++            P +++  +    
Sbjct: 7   LKIAQRQSDMTRQMTHPVARIVISLLVILGLWQAVVVTFDMPSFILPAPMEVLSRLVTRF 66

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           DV  L ++   T   ++  +++ L    ++A      + L   L+P+L   Q+IP+    
Sbjct: 67  DV--LMKHTLVTGQEIILGLLLGLGMGLMFALQMLLFKPLKRWLLPVLIASQAIPVFAIA 124

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++       KV+ A +   F + T          Y  L N      +++++   S 
Sbjct: 125 PVLMLWLGYGIASKVVMAAIIIFFPVTTCC--------YDGLRNTLTGYLDLAKTMGASK 176

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ   ++ +P ++P L   + +++      V+A    VVG+ V    G+G  +  A    
Sbjct: 177 WQLLKHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWVGSSAGLGYLMLQANARM 230

Query: 237 DLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
            +  +  A+  +  +      +   L +  I W
Sbjct: 231 IIDEMFAALFILALLSVSLYFITDKLLKKFIPW 263



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 58/160 (36%), Gaps = 10/160 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   + P      A P     P+++  + Y   +  +  ++++ F     +     
Sbjct: 100 LFKPLKRWLLPVLIASQAIPVFAIAPVLMLWLGYGIASKVVMAAIIIFF----PVTTCCY 155

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G       + ++A +   + W+  ++I LP   P   +G   A   A   ++V E    
Sbjct: 156 DGLRNTLTGYLDLAKTMGASKWQLLKHIQLPAALPTLASGIRVAVVIAPIGAVVGEWVG- 214

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 + GLG  + ++  +    E+   + I+    ++L
Sbjct: 215 -----SSAGLGYLMLQANARMIIDEMFAALFILALLSVSL 249


>gi|229844555|ref|ZP_04464695.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 6P18H1]
 gi|229812804|gb|EEP48493.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 6P18H1]
          Length = 245

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVGQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVAISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVAISLCLYFSIDWLLHRFIW 243


>gi|229188646|ref|ZP_04315685.1| ABC transporter, permease protein [Bacillus cereus ATCC 10876]
 gi|228594835|gb|EEK52615.1| ABC transporter, permease protein [Bacillus cereus ATCC 10876]
          Length = 207

 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 11/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V++ +  A ++   + I +   P     I P   +    P  V  PL +    Y  
Sbjct: 12  TLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYG- 70

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++I    + I  +++ G      +  ++  +   T W+ ++ +  P + PY
Sbjct: 71  ---MLPKVMVVILVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPY 127

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + +G   A   +   +I+ E          + GLG  +  +T+      V  GV  +   
Sbjct: 128 FFSGLKIAVTYSVMGAIIGEWLG------ASEGLGVMLTRATKSFLTARVF-GVAAIIVI 180

Query: 566 VLALNRFL 573
           V     F+
Sbjct: 181 VTLFLYFI 188



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +T   ++  +  ++L     A +        +++ P+L I Q+IPI+      +
Sbjct: 5   LLPNTMQTLQEVIIGLFFAILLGTSIAIIMDVIPLFRILINPLLVISQTIPIVVLAPLFI 64

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   L   F         +  S+ +    + +++ ++ ++ + + WQ +
Sbjct: 65  IWFGYGMLPKVMVVILVCFF--------PIALSILEGFQTVDKNMLKLLQTMKATKWQVY 116

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P  +P     + ++++      +  E +   +      G+G  +  A K   L A
Sbjct: 117 QKVKFPAVLPYFFSGLKIAVTYSVMGAIIGEWLGASE------GLGVMLTRATKSF-LTA 169

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            ++ +  ++ ++ L+   +
Sbjct: 170 RVFGVAAIIVIVTLFLYFI 188


>gi|282912013|ref|ZP_06319809.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282323709|gb|EFB54025.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
          Length = 211

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 82/200 (41%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L           + A++++++       L +K++R   +++ +  ++Q+IP L  L   
Sbjct: 11  QLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIPTLAVLAIM 70

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F           +   I A+F   +  +  +    + NI  +++E  +S  ++ +Q 
Sbjct: 71  IPIFGVG--------KTPTIVALFIYVLLPILNNTVLGVQNIDSNIKEAGKSMGMTQFQL 122

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  + +S      +   +  +  G       G+G +I   +   D L
Sbjct: 123 MKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNLYDPL 175

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            I+ A + +  +    D LL
Sbjct: 176 MIVTATVLVTALALGVDALL 195



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F ++  + ++       +  +V +++A I+ +P+GI +      ++ I   A +L   P
Sbjct: 3   EFLHEHGVQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKTKRTANIILTVAGVLQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++           + L + ++      IL N + G     ++ KE   S  +T
Sbjct: 63  TLAVLAIMIPIFGVGKTPTIVALFIYVLL----PILNNTVLGVQNIDSNIKEAGKSMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  + + LP   P  + G   +     + + ++     G       GLG +I      
Sbjct: 119 QFQLMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAG-------GLGDFIFNGLNL 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                +V   +++    L ++  L
Sbjct: 172 YDPLMIVTATVLVTALALGVDALL 195


>gi|254250442|ref|ZP_04943761.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124879576|gb|EAY66932.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 217

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q   +    +  A+  +++       L  +   L   L+ I  ++ ++P +   
Sbjct: 10  SWPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G        AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPLFSRFGQGI---GAAPAITAVFLYSLLPIMRNTYLALHNVEAGIKEAGTGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D+LL
Sbjct: 180 SMMKLLVGAVLVSLLAIVADRLL 202



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    ++ V + +  A +  +P+GI I     ++  +   A L+   P+   F 
Sbjct: 11  WPELLQLTLQHVWLVAIAVGCAIVAGVPLGILINRHDWLAGPLLGIATLVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   S +        ++  +   +   I+ N            KE  +   +T W+  
Sbjct: 71  LMIPLFSRFGQGIGAAPAITAVFLYSLLPIMRNTYLALHNVEAGIKEAGTGIGMTSWQRL 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA         ++ V   G       GLG  I  +  + S  +
Sbjct: 131 RLVELPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGTLILRAIGQSSMMK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +++G +++    +  +R L
Sbjct: 184 LLVGAVLVSLLAIVADRLL 202


>gi|257870710|ref|ZP_05650363.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           gallinarum EG2]
 gi|257804874|gb|EEV33696.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           gallinarum EG2]
          Length = 211

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   +        +A+ + ++       L  +  +   +++ +   +Q++P L  L  
Sbjct: 10  GQLVTKSIEHLYISFAALFLGIVVAVPLGVLLTRFPKAASIVIGVTSALQTVPSLALLAL 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ AI A+F   +  +  + Y  +  +  +  +V++   ++ +Q
Sbjct: 70  MIPILGVG--------KVPAIVALFIYSLLPILRNTYIGMKKVDWNYRDVAKGMGMTNFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  I  G       G+G  I   +     
Sbjct: 122 SIISVELPLAIPTIMAGIRLSAVYVLAWATLASYIGAG-------GLGDLIFSGLNNYQP 174

Query: 239 LAILYAMLTMLG 250
             I    + +  
Sbjct: 175 ALIFAGTIPVTI 186



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 66/198 (33%), Gaps = 11/198 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F  +    ++      ++     + +  ++ +P+G+ +   P  +S +      L  
Sbjct: 1   MQSFFNEYGGQLVTKSIEHLYISFAALFLGIVVAVPLGVLLTRFPKAASIVIGVTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++  +        +   + +   +   IL N   G      ++++VA    
Sbjct: 61  VPSLALLALMIPILGVG----KVPAIVALFIYSLLPILRNTYIGMKKVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T ++    + LP   P  + G   +       + ++     G       GLG  I    
Sbjct: 117 MTNFQSIISVELPLAIPTIMAGIRLSAVYVLAWATLASYIGAG-------GLGDLIFSGL 169

Query: 548 EKGSFPEVVLGVLIMCCF 565
                  +  G + +  F
Sbjct: 170 NNYQPALIFAGTIPVTIF 187


>gi|228957147|ref|ZP_04118914.1| ABC transporter, permease [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229126154|ref|ZP_04255172.1| ABC transporter, permease [Bacillus cereus BDRD-Cer4]
 gi|229143451|ref|ZP_04271877.1| ABC transporter, permease [Bacillus cereus BDRD-ST24]
 gi|296501475|ref|YP_003663175.1| hydroxymethylpyrimidine transport system permease [Bacillus
           thuringiensis BMB171]
 gi|228639953|gb|EEK96357.1| ABC transporter, permease [Bacillus cereus BDRD-ST24]
 gi|228657146|gb|EEL12966.1| ABC transporter, permease [Bacillus cereus BDRD-Cer4]
 gi|228802474|gb|EEM49324.1| ABC transporter, permease [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296322527|gb|ADH05455.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           thuringiensis BMB171]
          Length = 250

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 236



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 221 PIVLLSLLAIFFVVII 236


>gi|293607987|ref|ZP_06690290.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828560|gb|EFF86922.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 264

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 6/181 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             + A +I   +         + +   P+A L    P     PLV+  +     N  L L
Sbjct: 73  AFVCAVVIGTLIAFVFVQSRVVEACFMPYAILFQVTPIVAIAPLVIIWIQ----NTTLAL 128

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +  +    + IL N   G  +       +      + W+    + +P   PY+  G   
Sbjct: 129 VVCAMLVAVFPILTNTTLGLRSVNKGLLNLFQINKASRWQILMRLRVPNALPYFFGGLRI 188

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + G A   ++VSE  +       + GL   I ++  +   P +   + ++ C  L L   
Sbjct: 189 SSGLALIGAVVSEFVAGAGGT--SAGLAYQILQAGFQLDLPLMFAALFLITCTGLGLFVL 246

Query: 573 L 573
           +
Sbjct: 247 M 247



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A V +++   + A +  +SR +    +P   + Q  PI+      +++  N         
Sbjct: 73  AFVCAVVIGTLIAFVFVQSRVVEACFMPYAILFQVTPIVAIAPLVIIWIQN--------T 124

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA +       V+ +  +    L ++ + L  + +  + S WQ    L VP ++P    
Sbjct: 125 TLALVVCAMLVAVFPILTNTTLGLRSVNKGLLNLFQINKASRWQILMRLRVPNALPYFFG 184

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML----TMLG 250
            + +S        V SE +          G+   I  A  + DL  +  A+     T LG
Sbjct: 185 GLRISSGLALIGAVVSEFVAGAGGTSA--GLAYQILQAGFQLDLPLMFAALFLITCTGLG 242

Query: 251 VIFLYDQLLFRPMIVWSN 268
           +  L   L    +  W  
Sbjct: 243 LFVLMSLLSHFFLSKWHE 260


>gi|167845820|ref|ZP_02471328.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
          Length = 239

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 32  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 91

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 92  ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 143

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 144 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 201

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 202 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 232



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 6/161 (3%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +    P+    PL +        +    L  +++    W +  +  AG  A P   + V 
Sbjct: 79  MFNPLPSIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVG 134

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++ +TG R    I++P   P  + G   A   AW   I +E+             G YI
Sbjct: 135 RNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYI 192

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++  +     V  G+  +    L +   ++  L     + 
Sbjct: 193 FQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 233


>gi|84502079|ref|ZP_01000237.1| putative ABC transport proteins, inner membrane component
           [Oceanicola batsensis HTCC2597]
 gi|84390074|gb|EAQ02708.1| putative ABC transport proteins, inner membrane component
           [Oceanicola batsensis HTCC2597]
          Length = 287

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 12/242 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITM 387
                      + +L I W  +V  + I  A       V    Y ++     +     TM
Sbjct: 32  RLRDFGIWLASAVVLLIVWQYLVVTLEISPAVFPTPVAVWDSLYVNMMDGTFVRDLWFTM 91

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             V++     + +   + + I     +   + P+     + P     P+ +    +   +
Sbjct: 92  KEVMIGFFGGATLGFLLALLISEFRPVRVLLYPYVIAFQSVPKTALAPMFLIWFGFGIES 151

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L++    + +L N +AG      D  ++  ++     R +  + LP   P   
Sbjct: 152 K----VALVVSTVFFPVLVNTLAGIERTDPDQLDLLRAYCGKRARVFMRVKLPSALPSVF 207

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A   ++VSE            GLG  I               ++++     
Sbjct: 208 AGLELGVVLALIMAVVSEFLG------AVGGLGYRIMIFNTNLDMAGQFAAIIVLSIVGY 261

Query: 568 AL 569
            L
Sbjct: 262 IL 263



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 87/238 (36%), Gaps = 15/238 (6%)

Query: 23  LAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  ++V   + + L         P  + D + + +   +  +    T   ++        
Sbjct: 44  VVLLIVWQYLVVTLEISPAVFPTPVAVWDSLYVNMMDGTFVRDLWFTMKEVMIGFFGGAT 103

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A L ++ R + ++L P +   QS+P        +++F      K        +  
Sbjct: 104 LGFLLALLISEFRPVRVLLYPYVIAFQSVPKTALAPMFLIWFGFGIESK--------VAL 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + ++  + +  +    +     D  ++ R++     + F  + +P ++P +   + + + 
Sbjct: 156 VVSTVFFPVLVNTLAGIERTDPDQLDLLRAYCGKRARVFMRVKLPSALPSVFAGLELGVV 215

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V SE +        + G+G  I +     D+     A++ +  V ++   ++
Sbjct: 216 LALIMAVVSEFLG------AVGGLGYRIMIFNTNLDMAGQFAAIIVLSIVGYILHFIV 267


>gi|167911037|ref|ZP_02498128.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
          Length = 239

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 83/211 (39%), Gaps = 10/211 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             LP   + +   +L    + +   F    LAA +R    +L  +  +   +P +  L  
Sbjct: 32  GELPAKIAVSLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPL 91

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F             + +F +  + +W +  S +     +P  L  V R++ L+G +
Sbjct: 92  ALLWFGLGTG--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVR 143

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP ++P ++  + ++ +  W  ++A+E++            G YI     E   
Sbjct: 144 HVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYT 201

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +   +  ++ +  + +  +F  +   S K
Sbjct: 202 DRVFAGLAAVIAIGLVVEHGVFDALERVSVK 232



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 6/161 (3%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +    P+    PL +        +    L  +++    W +  +  AG  A P   + V 
Sbjct: 79  MFNPLPSIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVG 134

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++ +TG R    I++P   P  + G   A   AW   I +E+             G YI
Sbjct: 135 RNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYI 192

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++  +     V  G+  +    L +   ++  L     + 
Sbjct: 193 FQNRNELYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 233


>gi|126699589|ref|YP_001088486.1| ABC transporter permease [Clostridium difficile 630]
 gi|254975576|ref|ZP_05272048.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
 gi|255092964|ref|ZP_05322442.1| ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255101109|ref|ZP_05330086.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
 gi|255306976|ref|ZP_05351147.1| ABC transporter, permease protein [Clostridium difficile ATCC
           43255]
 gi|255314705|ref|ZP_05356288.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
 gi|255517380|ref|ZP_05385056.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
 gi|255650486|ref|ZP_05397388.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
 gi|260683596|ref|YP_003214881.1| ABC transporter permease [Clostridium difficile CD196]
 gi|260687256|ref|YP_003218390.1| ABC transporter permease [Clostridium difficile R20291]
 gi|115251026|emb|CAJ68855.1| ABC-type transport system, permease [Clostridium difficile]
 gi|260209759|emb|CBA63554.1| ABC transporter, permease protein [Clostridium difficile CD196]
 gi|260213273|emb|CBE04809.1| ABC transporter, permease protein [Clostridium difficile R20291]
          Length = 256

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + I W  +V  + +          + +  ++D   +     +T+   ++  I+A II +
Sbjct: 22  FILILWQSMVGVLEVPQYILPTPVDIINVFFKDYQNLSMHAVVTIGEAILGFIVAIIISL 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI + F   I   + P   +    P  +  PL +    +  +       L+++    +
Sbjct: 82  VIGILMDFVSIIKKCLYPIMLVTQMIPTIIIAPLFMIWFGFGTMPK----VLMVMLTCFF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL + + G      D+  +  +        + ++  P     + +G   +   A  A+ 
Sbjct: 138 PILISFVDGIENIDKDYLNLFKTMDSNKVNTFIHLKFPMAMDKFFSGLKISATYAVMAAT 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E          T GLG Y+  S    +  +V    +++  F L     +
Sbjct: 198 VAEWLGG------TKGLGVYMLRSKSAYALDKVFASTILVVIFSLMFVGIV 242



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 87/238 (36%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
              F+L++    + +  + +  +P  +  I     D  +L  +A  T    +   +++++
Sbjct: 19  TFLFILILWQSMVGVLEVPQYILPTPVDIINVFFKDYQNLSMHAVVTIGEAILGFIVAII 78

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            + V   L      +   L PI+ + Q IP +      +++F            +  +  
Sbjct: 79  ISLVIGILMDFVSIIKKCLYPIMLVTQMIPTIIIAPLFMIWFG--------FGTMPKVLM 130

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  + +  S    + NI +D   + ++   +    F +L  P +M      + +S +
Sbjct: 131 VMLTCFFPILISFVDGIENIDKDYLNLFKTMDSNKVNTFIHLKFPMAMDKFFSGLKISAT 190

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   +E +          G+G Y+  +     L  +  + + ++    ++  ++
Sbjct: 191 YAVMAATVAEWLGG------TKGLGVYMLRSKSAYALDKVFASTILVVIFSLMFVGIV 242


>gi|89099685|ref|ZP_01172559.1| YtlD [Bacillus sp. NRRL B-14911]
 gi|89085628|gb|EAR64755.1| YtlD [Bacillus sp. NRRL B-14911]
          Length = 267

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  + ++    L   SL      T    +   V+      + A +   S  +  +L P
Sbjct: 55  SSPSKVWELFLSKLSDGSLLANLGITLSETVFGFVLGTFLGTLLAAILWWSPIIQKILDP 114

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   V    + ++              +Y S   + 
Sbjct: 115 YLVILNAMPKVALGPILIVALGPSFTSIVAMGAIISVIITTIV--------VYTSFKEVD 166

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F  +  Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 167 PNYLKVLQTFGATRAQCFKEAILPASFPVIISTLKVNVGLSWVGVIVGEFLVSSK----- 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +  +   ++ ++L +     +  QL+
Sbjct: 222 -GLGYMIIYGFQVFNFTLVMLSLLIIAVFATIMYQLV 257



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 78/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT+   V   ++ + +   +   + + P I   + P+  +L A P     P+
Sbjct: 71  GSLLANLGITLSETVFGFVLGTFLGTLLAAILWWSPIIQKILDPYLVILNAMPKVALGPI 130

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +     +     +++ +  T   +  +          ++ +V  +F  T  + ++ 
Sbjct: 131 LIVALGPSFTSIVAMGAIISVIITTIVVYTSF----KEVDPNYLKVLQTFGATRAQCFKE 186

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            ILP  FP  ++      G +W   IV E        + + GLG  I    +  +F  V+
Sbjct: 187 AILPASFPVIISTLKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLVM 240

Query: 557 LGVLIMCCFVLALNRFL 573
           L +LI+  F   + + +
Sbjct: 241 LSLLIIAVFATIMYQLV 257


>gi|307265805|ref|ZP_07547356.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919200|gb|EFN49423.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 270

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T      +     +T+   ++   + +II + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMMTLSQNGSLFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +      P + ++L +        + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMGNGEA-PIITMALAISLIV---TIISLQTGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     ILP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VLI+      +  F+
Sbjct: 233 GQIFKLDLVMTSVLILSILSALMYIFI 259



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       SL  +   T    +    +  +   + A L   S  L  V  P
Sbjct: 57  SQPSRMLKTMMTLSQNGSLFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLQTGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
            G+G  I    +   L  ++ ++L +  +  L       L + +I W
Sbjct: 223 AGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYIFIVYLEKKLIRW 269


>gi|168180040|ref|ZP_02614704.1| putative ABC transporter, permease protein [Clostridium botulinum
           NCTC 2916]
 gi|170757084|ref|YP_001781022.1| putative ABC transporter, permease protein [Clostridium botulinum
           B1 str. Okra]
 gi|226948648|ref|YP_002803739.1| putative ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|169122296|gb|ACA46132.1| putative ABC transporter, permease protein [Clostridium botulinum
           B1 str. Okra]
 gi|182668926|gb|EDT80902.1| putative ABC transporter, permease protein [Clostridium botulinum
           NCTC 2916]
 gi|226842358|gb|ACO85024.1| putative ABC transporter, permease protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 253

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   RENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ I+ I +GI  G    +   ++P    + A P      + +  +   
Sbjct: 67  KSIVRVVIGILISIILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWL--K 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  ++ S+LM F     I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 125 SSSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 99/228 (43%), Gaps = 9/228 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +V +  + ++ ++       P+ + + + I            ++ +R++  ++IS++
Sbjct: 22  IIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISII 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +A  +  +  +L P++  +++ P++  +   +V+         + +   AIF 
Sbjct: 82  LGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVW---------LKSSSVAIFT 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++   + ++ + L E++  + +        + +P + P ++  ++M + 
Sbjct: 133 SILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLG 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            GW   VASE++      I L  + +   LA +E     I+  +L+++
Sbjct: 193 IGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI 240


>gi|163760957|ref|ZP_02168035.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
 gi|162281738|gb|EDQ32031.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
          Length = 260

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 82/233 (35%), Gaps = 10/233 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +++L   W     G  + +       ++          +      T++  +V   +A   
Sbjct: 19  TFVLFALWEACSRGFDLPVYILPAPTVIAQSIVDYWPAIWKNSLQTLYTTLVGFALAVAG 78

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +G+ +G+   I + + P      A P     P++V           +   L      
Sbjct: 79  GLALGLLVGWSRFIYAGLYPLMIGFNAVPKVAVVPILVIWFGIG----TVPAILTAFLIA 134

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I+ NV  G +    + ++V  +           + +P   PY+      A   A+  
Sbjct: 135 FFPIVVNVATGLATIEPEMEDVLRALGAKKLDIMLKVGIPRSMPYFFGSLKVAITLAFVG 194

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           S++SE  +        +GLG  +  +  + + P V  G++++    + +   +
Sbjct: 195 SVISETVA------ANSGLGHMMLAAQSQFNVPLVFAGLVMLAIEGIVMYALM 241



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P   V    I     ++ + + +T    L    +++        L   SR +   L P++
Sbjct: 41  PAPTVIAQSIVDYWPAIWKNSLQTLYTTLVGFALAVAGGLALGLLVGWSRFIYAGLYPLM 100

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
               ++P +  +   V++F            + AI   F    + +  ++   L  I  +
Sbjct: 101 IGFNAVPKVAVVPILVIWFGIG--------TVPAILTAFLIAFFPIVVNVATGLATIEPE 152

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +E+V R+           +G+P SMP    ++ ++++  +   V SE +          G
Sbjct: 153 MEDVLRALGAKKLDIMLKVGIPRSMPYFFGSLKVAITLAFVGSVISETVAANS------G 206

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLER 274
           +G  +  A  + ++  +   ++ +     +   L   L   M  W+++  + R
Sbjct: 207 LGHMMLAAQSQFNVPLVFAGLVMLAIEGIVMYALMAWLEMRMTGWAHRSGMNR 259


>gi|118443973|ref|YP_878408.1| taurine ABC transporter permease [Clostridium novyi NT]
 gi|118134429|gb|ABK61473.1| taurine ABC transporter, permease protein, putative [Clostridium
           novyi NT]
          Length = 253

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 84/236 (35%), Gaps = 15/236 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD----VLYVIWLGCIT-MFRVVVLIIIA 397
            + +FW  +   V++ I  Q +               V    W+   + + RVV+ ++ +
Sbjct: 13  FIILFWLLIWGAVSLYINNQVLFPSPKATFISLLNLIVQKYFWITIFSSVSRVVMGLLFS 72

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
            ++ I +G+  G   ++   + P    + A P      L +      +++         I
Sbjct: 73  ILLGIILGLCSGINVYLEEILMPLISSIKATPVMSIIILALVWFKASNVS-----IFTTI 127

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I  NV+ G  +   +  ++A+ +++      + I +P I  Y  +  +   G A
Sbjct: 128 LICFPIIYTNVVEGIKSTDLNLLQMANIYNVKKIYIVKDIYIPNIKTYVESSILMCLGLA 187

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  S+ SEV S          +G  I  S       E+    +++    L      
Sbjct: 188 FKVSVASEVLSTPKYS-----IGLNILNSKSMLETEELFAWTIVVIILSLLFEVIF 238



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 93/230 (40%), Gaps = 9/230 (3%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F +L ++L+ G +++ ++       P+     +   +           +  R++  ++ S
Sbjct: 13  FIILFWLLIWGAVSLYINNQVLFPSPKATFISLLNLIVQKYFWITIFSSVSRVVMGLLFS 72

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L   +    +  +  L  +L+P++  +++ P++  +   +V+F              +I
Sbjct: 73  ILLGIILGLCSGINVYLEEILMPLISSIKATPVMSIIILALVWFKASN---------VSI 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F         +  ++ + + +   +L +++  + +        + +P     +  +++M 
Sbjct: 124 FTTILICFPIIYTNVVEGIKSTDLNLLQMANIYNVKKIYIVKDIYIPNIKTYVESSILMC 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           +   +   VASE++      I L  + S   L  +E     I+  +L++L
Sbjct: 184 LGLAFKVSVASEVLSTPKYSIGLNILNSKSMLETEELFAWTIVVIILSLL 233


>gi|209547288|ref|YP_002279206.1| betaine/proline ABC transporter permease [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209538532|gb|ACI58466.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 283

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 95/257 (36%), Gaps = 22/257 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            +  +L    +  +F   + L+A V V+    + L       +      +V        L
Sbjct: 35  LVETVLSAIEAALLFVPPYALIAIVAVVAFFAVSLRAAILAGLCLGFCLLV-------GL 87

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              + +T   +  A+VIS+L  F    L ++ + L  V+ PILD+MQ++P   +L   V+
Sbjct: 88  WTASMQTLALVSVAVVISVLIAFPIGVLCSRHKTLEAVVRPILDVMQTVPPWVYLIPAVM 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F            + AI A     +  M      +   +P+   E+  +         W
Sbjct: 148 IFSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPKVFIELGSAIGAPPRSILW 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P +   L+  +   +      VV + ++  G            +   +   ++   
Sbjct: 200 KIEIPLAKQTLLVGLNQCILLSLAMVVLAGLVGAGGLGAE-------VTRGLTRMEMGLG 252

Query: 242 LYAMLTMLGVIFLYDQL 258
           L A L ++ V  L D+L
Sbjct: 253 LRAGLAIVAVALLLDRL 269



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 4/216 (1%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           L  + +S   F +P  + +      L     +  E  L       +          V   
Sbjct: 3   LSTLQFSPGAFLAPSVDWLNTNLHPLFAAISYLVETVLSAIEAALLFVPPYALIAIVAVV 62

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
               ++ ++         +  ++ +      T+  V V ++I+ +I  P+G+       +
Sbjct: 63  AFFAVSLRAAILAGLCLGFCLLVGLWTASMQTLALVSVAVVISVLIAFPIGVLCSRHKTL 122

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            + ++P   ++   P  V+    V   S   +   +   +  I      +L       + 
Sbjct: 123 EAVVRPILDVMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI----PPMLRLTTLAFNQ 178

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            P  F E+ S+           I +P      + G 
Sbjct: 179 VPKVFIELGSAIGAPPRSILWKIEIPLAKQTLLVGL 214


>gi|324324769|gb|ADY20029.1| putative ABC transporter, permease protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 251

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 82/240 (34%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 9   LPALTLSSILLALWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 67

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 68  GAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 123

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 124 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 184 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVLI 237



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 73/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L    IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 56  HLPATLYVVLIGGAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 116 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 168 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 221

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 222 PIVLLSLLAIFFVVLI 237


>gi|229171510|ref|ZP_04299091.1| ABC transporter, permease [Bacillus cereus MM3]
 gi|228611948|gb|EEK69189.1| ABC transporter, permease [Bacillus cereus MM3]
          Length = 250

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 63/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLSVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILI 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLSVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|218232052|ref|YP_002365521.1| putative ABC transporter, permease protein [Bacillus cereus B4264]
 gi|229042589|ref|ZP_04190330.1| ABC transporter, permease [Bacillus cereus AH676]
 gi|229108335|ref|ZP_04237952.1| ABC transporter, permease [Bacillus cereus Rock1-15]
 gi|218160009|gb|ACK60001.1| putative ABC transporter, permease protein [Bacillus cereus B4264]
 gi|228674962|gb|EEL30189.1| ABC transporter, permease [Bacillus cereus Rock1-15]
 gi|228726682|gb|EEL77898.1| ABC transporter, permease [Bacillus cereus AH676]
          Length = 250

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 236



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 221 PIVLLSLLAIFFVVII 236


>gi|152974439|ref|YP_001373956.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152023191|gb|ABS20961.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cytotoxicus NVH 391-98]
          Length = 250

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 75/217 (34%), Gaps = 11/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + I       IV  +   D+L+ + L   T++ V + I I+ ++ + + + +     +  
Sbjct: 31  MYILPAPTAIIVKMWALHDILFTVHLPA-TLYVVFIGIAISIVLGVGLAMAMNASKWMER 89

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
              P        P     PL V    Y          ++ +  T + I  N+  G  +  
Sbjct: 90  SFYPLLVASQTIPITALAPLFVLWFGYS----IWSKVVVTVLITFFPIAVNMYDGLRSTK 145

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            D++E+  ++  T    +  + LP   PY+ +    A   +   + + E           
Sbjct: 146 KDWEELLVTYGATKQDIFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLG------AQ 199

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG +      +     V   ++++    +     +
Sbjct: 200 AGLGYFSKRMMTQLDGAGVFAPIVLLSLLAILFVLLV 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 76/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +   + IS++     A     S+ +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVFIGIAISIVLGVGLAMAMNASKWMERSFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +  + +        + +  +MY  L +  +D EE+  ++  +    F  L
Sbjct: 115 GY--------SIWSKVVVTVLITFFPIAVNMYDGLRSTKKDWEELLVTYGATKQDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +  L+  L+
Sbjct: 221 PIVLLSLLAILFVLLV 236


>gi|209547343|ref|YP_002279261.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538587|gb|ACI58521.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 293

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVL 567
             L
Sbjct: 266 VTL 268



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 80/219 (36%), Gaps = 17/219 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLER 274
             +  A+L ++ V    +    L+   +  W  +  L+ 
Sbjct: 254 AGMFAAILLVMVVTLFAEFIMTLVENRLAKWRPQQHLDT 292


>gi|154496978|ref|ZP_02035674.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC
           29799]
 gi|150273802|gb|EDN00919.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC
           29799]
          Length = 249

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 91/240 (37%), Gaps = 17/240 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
           +     + W  V    A+ +         I  +                  +M R+    
Sbjct: 7   LRPWAVLVWLLVWQIGAMALDQQILLVSPIQVLARLGELALQGSFWKAVGFSMLRITGGF 66

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++ +I+   +  +      +   + P    + + P   F  +++S + +   N ++ +S 
Sbjct: 67  LLGAIVGTVLAAFSARLRLVEELLAPLLLAIKSIPVASF--IILSLILFSSRNLSILISF 124

Query: 455 LMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LM+      +L++ V+ G  A  +   E+A  F I   R  RY+ LP + PY+    ++A
Sbjct: 125 LMVL----PVLYSGVLGGIRAMDSQMLEMAQLFRIPTLRRIRYVYLPQVLPYFQAACVSA 180

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G  W + I +EV       + T  +G  + ++      P++    L++    L   RF 
Sbjct: 181 LGLCWKSGIAAEVIG-----MPTGSIGERLQQAKVYLDTPDLFAWTLVIVLVSLLFERFF 235



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 97/242 (40%), Gaps = 14/242 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + +L ++LV  I  + L        P  ++  +       S  +    + LR+    ++
Sbjct: 9   PWAVLVWLLVWQIGAMALDQQILLVSPIQVLARLGELALQGSFWKAVGFSMLRITGGFLL 68

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +   V A  +A+ R +  +L P+L  ++SIP+  F+  +++ F +            +
Sbjct: 69  GAIVGTVLAAFSARLRLVEELLAPLLLAIKSIPVASFIILSLILFSSRN---------LS 119

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F   +  +   +   +  +   + E+++ FR+   ++  Y+ +P  +P      + 
Sbjct: 120 ILISFLMVLPVLYSGVLGGIRAMDSQMLEMAQLFRIPTLRRIRYVYLPQVLPYFQAACVS 179

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W   +A+E+I +         IG  +  A    D   +    L ++ V  L+++ 
Sbjct: 180 ALGLCWKSGIAAEVIGMPTGS-----IGERLQQAKVYLDTPDLFAWTLVIVLVSLLFERF 234

Query: 259 LF 260
             
Sbjct: 235 FL 236


>gi|146342346|ref|YP_001207394.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195152|emb|CAL79177.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 255

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+      + +   I + +GI +G    +S  ++   + +   P+    PL +  + + +
Sbjct: 60  TLASAFAGLALGGAIGLVLGITLGLSQILSRLMEVTIEAIRPIPSVALLPLALIALGFGY 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                    ++ F   W +L    A          EVA    +T       I++P   P 
Sbjct: 120 R----MEIAIVAFACVWPVLIMTRAAVGGIEPRLIEVARVLRLTQLDRVMKIVIPAALPR 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                  A G A   ++  E+A      +   GLGA I  + +      ++  ++ +   
Sbjct: 176 IFLAFRLAAGIALIVAVTVEIA------INPLGLGAGIMTAQQGLQPDLMLAYLVWIGVT 229

Query: 566 VLALN 570
             ALN
Sbjct: 230 GFALN 234



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 14/249 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +  RI P +  L A       + +          P  ++  +       SL      T  
Sbjct: 3   LPERIKPVLLPLAALFAFEAWMRLAAVQSDSLAPPSAVLLALLRAFTDGSLLIATRDTLA 62

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              + + +      V       S+ L  ++   ++ ++ IP +  L   ++     Y  +
Sbjct: 63  SAFAGLALGGAIGLVLGITLGLSQILSRLMEVTIEAIRPIPSVALLPLALIALGFGYRME 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   I  +  + VW +      ++  I   L EV+R  RL+   +   + +P ++P
Sbjct: 123 --------IAIVAFACVWPVLIMTRAAVGGIEPRLIEVARVLRLTQLDRVMKIVIPAALP 174

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +     ++        V  E+       I   G+G+ I  A +      +L  ++ +  
Sbjct: 175 RIFLAFRLAAGIALIVAVTVEIA------INPLGLGAGIMTAQQGLQPDLMLAYLVWIGV 228

Query: 251 VIFLYDQLL 259
             F  +  L
Sbjct: 229 TGFALNAAL 237


>gi|118470340|ref|YP_890707.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Mycobacterium smegmatis str. MC2 155]
 gi|118171627|gb|ABK72523.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner
           membrane subunit, putative [Mycobacterium smegmatis str.
           MC2 155]
          Length = 276

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 85/255 (33%), Gaps = 17/255 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383
           H P        + R   +  +     VC      AW     +         ++ I     
Sbjct: 17  HTPRRIAAPWLHHRRWLIASLTLILAVCAWGAVAAWVDDPILPRPADVGAQIFAIIASGA 76

Query: 384 -----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  ++ ++V    +A +  + VG  +G    +++       +L   P   +    +
Sbjct: 77  AVTNFAASITKIVAGFALAMVGGLVVGFVMGRSRFMAAYFSLPLFVLGNMPGLTYAVFGL 136

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                    P +  +L+       +I  NV  G  +      ++  +F  + +   R++ 
Sbjct: 137 LIFGVGAGGPIVVSALV----ALPFIAMNVAEGVRSIDGRLLDMCQAFERSHFDILRHLY 192

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP +  +   G       AW    ++EV   G      +G+G  I ++ ++    +++  
Sbjct: 193 LPALTTFVFAGVRYGFAMAWKVEALTEVFGAG------SGVGFMIRKAYQEFRVDDMLAW 246

Query: 559 VLIMCCFVLALNRFL 573
             +    ++ + R L
Sbjct: 247 TTLFIVAMVLIERAL 261



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 92/241 (38%), Gaps = 19/241 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
            + + +  L++ +                 P D+   +   +   +     + +  ++++
Sbjct: 31  RWLIASLTLILAVCAWGAVAAWVDDPILPRPADVGAQIFAIIASGAAVTNFAASITKIVA 90

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              ++++   V   +  +SR +       L ++ ++P L +  F ++ F     G ++ +
Sbjct: 91  GFALAMVGGLVVGFVMGRSRFMAAYFSLPLFVLGNMPGLTYAVFGLLIFGVGAGGPIVVS 150

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L A+  I          ++ + + +I   L ++ ++F  S +    +L +P     +  
Sbjct: 151 ALVALPFI--------AMNVAEGVRSIDGRLLDMCQAFERSHFDILRHLYLPALTTFVFA 202

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIF 253
            +    +  W     +E+   G       G+G  I  A +E  +  +L +  L ++ ++ 
Sbjct: 203 GVRYGFAMAWKVEALTEVFGAGS------GVGFMIRKAYQEFRVDDMLAWTTLFIVAMVL 256

Query: 254 L 254
           +
Sbjct: 257 I 257


>gi|297181639|gb|ADI17822.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [uncultured Rhodospirillales bacterium
           HF0200_01O14]
          Length = 311

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  ++  T    L       L   + A        L   L+P +   Q+IPIL  
Sbjct: 102 TSKRSLVYHSWVTLSSTLLGFASGTLLGIILAVGIVHVTTLEKSLMPWVISSQTIPILAI 161

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + + +  F    + +T SM + L +      ++ R++  S
Sbjct: 162 APMIIVVLGAIGIKGLVPKAVISTYLCF----FPVTISMVKGLRSPQTIQLDLMRTYNAS 217

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ FW L +P +MP L  ++ ++++      +  E+           G+G+ +      
Sbjct: 218 KWQTFWQLRLPSAMPYLFASLKVAIAISLVGAIIGELPTGAQA-----GLGARLLAGSYY 272

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              + I  A+ T   V  +   ++
Sbjct: 273 GQTIQIWSALFTAAFVAAMMVVIV 296



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 76/207 (36%), Gaps = 12/207 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++     +++ I + + I     +   + P+       P     P++
Sbjct: 106 SLVYHSWVTLSSTLLGFASGTLLGIILAVGIVHVTTLEKSLMPWVISSQTIPILAIAPMI 165

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  +   + +  +++ G  +      ++  +++ + W+ +  +
Sbjct: 166 IVVLGAIGIKGLVPKAVISTYLCFFPVTISMVKGLRSPQTIQLDLMRTYNASKWQTFWQL 225

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY       A   +   +I+ E+ +         GLGA +   +  G   ++  
Sbjct: 226 RLPSAMPYLFASLKVAIAISLVGAIIGELPTGAQ-----AGLGARLLAGSYYGQTIQIWS 280

Query: 558 GV-------LIMCCFVLALNRFLWHPL 577
            +        +M   V    R +   +
Sbjct: 281 ALFTAAFVAAMMVVIVGWCERRVLARM 307


>gi|192289991|ref|YP_001990596.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283740|gb|ACF00121.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 272

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++ + +  GI IG  P  ++ +  F  + +  P     P++   +  
Sbjct: 76  LASLERLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ GT   I+ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GENSK----IALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQIALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +        +GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIDSLRLQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVIIPYVVWIT 245

Query: 564 CFVLALN---RFLWHPLYLY 580
                ++   R +    + +
Sbjct: 246 LLAFLMDLALRLIQRKAFPW 265



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 17/216 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ +A+ IS     V+  +         +L   + +   +P L  L    
Sbjct: 71  LWSDTLASLERLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I    +  +   +   +  +PR+    +++   S WQ  
Sbjct: 131 IVMGLG--------ENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDS------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
           I+  ++ +  + FL D   +L+ R    W    R E
Sbjct: 237 IIPYVVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272


>gi|126658425|ref|ZP_01729574.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. CCY0110]
 gi|126620357|gb|EAZ91077.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Cyanothece sp. CCY0110]
          Length = 513

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 72/195 (36%), Gaps = 12/195 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +L AM+++         + ++  +L   ++ + + +Q+IP L    F +    
Sbjct: 17  TGEHITLVLIAMIVATGIGIPLGIIMSRYPKLANPILLVTNAVQTIPSLALFGFLITVPF 76

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               GK       AI A+    +  +  + Y  +  I + ++E  +S  L   +  + + 
Sbjct: 77  LGGIGKRP-----AIIALILYALLPIIKNTYIGITQIKKGVKEAGKSLGLDPLKILFLIE 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  ++  + ++        V    I      I   G+G +I   +   D   IL  
Sbjct: 132 LPLALKVILGGVRIA-------AVICVGIATIAAAIGGGGLGVFIFRGLSTVDNTMILAG 184

Query: 245 MLTMLGVIFLYDQLL 259
            +    +  L D  L
Sbjct: 185 AIPSAIIALLVDWGL 199



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 1/128 (0%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ +I+A+ I IP+GI +   P +++ I      +   P+   F  +++      +   
Sbjct: 24  VLIAMIVATGIGIPLGIIMSRYPKLANPILLVTNAVQTIPSLALFGFLITVPFLGGIGKR 83

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  L+++     I+ N   G +      KE   S  +   +    I LP      + G
Sbjct: 84  PAIIALILY-ALLPIIKNTYIGITQIKKGVKEAGKSLGLDPLKILFLIELPLALKVILGG 142

Query: 510 AITACGGA 517
              A    
Sbjct: 143 VRIAAVIC 150


>gi|297544157|ref|YP_003676459.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296841932|gb|ADH60448.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 270

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T     Y      +T+   ++   + +II + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMMTLSQNGYFFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +     N    +  + +  +    + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMG----NGEAPIITMALAISLIVTIISLQTGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     ILP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VLI+      +  F+
Sbjct: 233 GQIFKLDLVMTSVLILSILSALMYIFI 259



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    +    +  +   + A L   S  L  V  P L ++ S+P +      +V+  N  
Sbjct: 82  TLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLNSLPKIALGPIFIVWMGNG- 140

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E   I       +     S+      +  +  ++ ++F  +  Q      +P 
Sbjct: 141 -------EAPIITMALAISLIVTIISLQTGFKEVDEEKIKLLKTFGATKMQILTKCILPA 193

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+P ++  + +++   W  V+  E +V         G+G  I    +   L  ++ ++L 
Sbjct: 194 SVPTIISAIKINIGLSWVGVITGEFLV------SKAGLGYLIVYGGQIFKLDLVMTSVLI 247

Query: 248 MLGVIFLYDQLL 259
           +  +  L    +
Sbjct: 248 LSILSALMYIFI 259


>gi|30018903|ref|NP_830534.1| hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus ATCC 14579]
 gi|29894445|gb|AAP07735.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           cereus ATCC 14579]
          Length = 251

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 9   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 67

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 68  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 123

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 124 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 183

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 184 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 237



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 56  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 115

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 116 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 167

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 168 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 221

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 222 PIVLLSLLAIFFVVII 237


>gi|39934483|ref|NP_946759.1| taurine transport system permease [Rhodopseudomonas palustris
           CGA009]
 gi|39648332|emb|CAE26852.1| possible taurine transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 272

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++ + +  GI IG  P  ++ +  F  + +  P     P++   +  
Sbjct: 76  LASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ GT   I+ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GENSK----IALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQIALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +        +GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIDSLRLQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVIIPYVVWIT 245

Query: 564 CFVLALN---RFLWHPLYLY 580
                ++   R +    + +
Sbjct: 246 LLAFLMDLALRLIQRKAFPW 265



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 17/216 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ +A+ IS     V+  +         +L   + +   +P L  L    
Sbjct: 71  LWSDTLASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I    +  +   +   +  +PR+    +++   S WQ  
Sbjct: 131 IVMGLG--------ENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDS------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
           I+  ++ +  + FL D   +L+ R    W    R E
Sbjct: 237 IIPYVVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272


>gi|260913391|ref|ZP_05919872.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pasteurella dagmatis ATCC 43325]
 gi|260632622|gb|EEX50792.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Pasteurella dagmatis ATCC 43325]
          Length = 250

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 16/214 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P ++ D +    D+  L ++A  T L +   + + +    + A L + SR L   L+
Sbjct: 34  LPPPTEVFDQLASRYDL--LWEHAQVTLLEIGLGLFLGVTLGLISALLLSLSRHLSAFLL 91

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L I Q+IP+       V++F      K++   L   F +  +         Y  L N 
Sbjct: 92  PLLVISQAIPVFAIAPLLVLWFGYGLASKIVMTVLIIYFPVTAAC--------YDGLRNT 143

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P    E++++ ++S     + + +P ++P     + +++S      VA    +VG+ V  
Sbjct: 144 PNQWLELAKTMQISLLPMLFKVRLPAALPSFASGLRIAVS------VAPIGAIVGEWVGS 197

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  +  A     +  +  A+  ++ +    
Sbjct: 198 SQGLGYLMLHANARMQVDLMFAALFVLMIISLCL 231



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 10/154 (6%)

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           + + P   +  A P     PL+V    Y   +  +   L++ F     +      G    
Sbjct: 88  AFLLPLLVISQAIPVFAIAPLLVLWFGYGLASKIVMTVLIIYF----PVTAACYDGLRNT 143

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN + E+A +  I+       + LP   P + +G   A   A   +IV E          
Sbjct: 144 PNQWLELAKTMQISLLPMLFKVRLPAALPSFASGLRIAVSVAPIGAIVGEWVG------S 197

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + GLG  +  +  +     +   + ++    L L
Sbjct: 198 SQGLGYLMLHANARMQVDLMFAALFVLMIISLCL 231


>gi|304316377|ref|YP_003851522.1| sugar ABC transporter inner membrane protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777879|gb|ADL68438.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 269

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 69/201 (34%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   +     +T+   ++   + + I I + I + +    S   +P+  +L + P   
Sbjct: 68  LSEDGSLFTHIWVTLSETLIGFALGTFIGIAIAIMLWWSSFASKVAEPYLIVLNSLPKIA 127

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ +  +     N    +  + +  +    + ++  G      D  ++  +F  T ++
Sbjct: 128 LGPIFIVWMG----NGEAPIITMGLAISLIVTIISLETGFMQVDEDKIKLLKTFGATKYQ 183

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
                ILP   P  ++      G +W   I  E        +   GLG  I    +    
Sbjct: 184 ILTKCILPASIPTIMSAIKINMGLSWVGVITGEFL------VSKAGLGYLIVYGGQIFKL 237

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  VLI+      +   L
Sbjct: 238 DIVMSSVLILSVLAALMYVLL 258



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 80/218 (36%), Gaps = 16/218 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +    +  SL  +   T    L    +        A +   S     V  P
Sbjct: 56  SQPSRMLKTIINLSEDGSLFTHIWVTLSETLIGFALGTFIGIAIAIMLWWSSFASKVAEP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            L ++ S+P +      +V+  N   P   +G  ++ I  I          S+      +
Sbjct: 116 YLIVLNSLPKIALGPIFIVWMGNGEAPIITMGLAISLIVTI---------ISLETGFMQV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  + +Q      +P S+P ++  + ++M   W  V+  E +V       
Sbjct: 167 DEDKIKLLKTFGATKYQILTKCILPASIPTIMSAIKINMGLSWVGVITGEFLV------S 220

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  +  L   LL
Sbjct: 221 KAGLGYLIVYGGQIFKLDIVMSSVLILSVLAALMYVLL 258


>gi|152970353|ref|YP_001335462.1| binding-protein dependent transport system inner membrane protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|330010595|ref|ZP_08306826.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955202|gb|ABR77232.1| Binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|328534476|gb|EGF61066.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 246

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 16/231 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R++         +L+ G+ +    GI    +P  +     + ++   L  +   T   +L
Sbjct: 4   RLWRGGMVFGGLMLLWGLAS--RSGIPHFLLPSPLAVAEALWVNRAYLGWHTLITLSEIL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S + + +      A     S RL   L+P++   Q+IP+       V++       KV  
Sbjct: 62  SGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQAIPVFALAPLLVLWLGFGMSAKVAM 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F         +T + +  L  + ++  +++RS   S   +  ++ +  ++P L 
Sbjct: 122 AVLVIFF--------PVTSAFFDGLRRVNQEYLDLARSMNASFGAQLRHVRLMAALPALG 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             + M+ +      VA    ++G+ V    G+G  +  A           A
Sbjct: 174 SGLRMAAA------VAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAA 218



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
             V    + +  Y+ W   IT+  ++  + +   + + + + +   P +   + P     
Sbjct: 36  LAVAEALWVNRAYLGWHTLITLSEILSGLALGVTLGVTLALGMILSPRLQRWLMPLVLTS 95

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P     PL+V  +  + ++  + +++L+IF   + +      G      ++ ++A S
Sbjct: 96  QAIPVFALAPLLVLWLG-FGMSAKVAMAVLVIF---FPVTSAFFDGLRRVNQEYLDLARS 151

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
            + +     R++ L    P   +G   A   A   +I+ E            GLG  +  
Sbjct: 152 MNASFGAQLRHVRLMAALPALGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLN 205

Query: 546 STEKGSFPEVVLG 558
           +  +         
Sbjct: 206 ANARLQTDICFAA 218


>gi|310816280|ref|YP_003964244.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Ketogulonicigenium vulgare Y25]
 gi|308755015|gb|ADO42944.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Ketogulonicigenium vulgare Y25]
          Length = 284

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +     IT+      +++A +      +           + P+A +L   P    
Sbjct: 71  TDWPILWDALQITLLITFSALLLAIVGGALTALLFAQSRWAEIALYPYAVVLQVTPIVAI 130

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++     Y  +    L +       + IL N + G  +  ++  ++   +  +  + 
Sbjct: 131 APLLIV----YAPSTEAVLLICAFLVAFFPILSNTVQGLKSADHNLVDLFELYGASKSQQ 186

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + +P   PY+V G   A G A   S+V+E  +         GL   I E+  + + P
Sbjct: 187 LRLLKIPTALPYFVAGLNIAGGLALIGSVVAEFTAGAA--GSKAGLAFRILEAGRRLNIP 244

Query: 554 EVVLGVLIMCCFVLA-------LNRFLWHPLYLYGTRCLR 586
            +   +L++    +A       +++ L    +       R
Sbjct: 245 RLFAALLLITLTGVAIFILTSFISKLLLRRWHESAMTRER 284



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 11/241 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +   +  L+ F++      + ++ I    +PR    +     D   L      T L   S
Sbjct: 31  VLVPLATLIVFLIAWD-TTVRVNNIPPYILPRPWDVVTTFVTDWPILWDALQITLLITFS 89

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++++++   + A L A+SR   + L P   ++Q  PI+      +VY            
Sbjct: 90  ALLLAIVGGALTALLFAQSRWAEIALYPYAVVLQVTPIVAIAPLLIVY--------APST 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   +   F    + +  +  Q L +   +L ++   +  S  Q+   L +P ++P  V 
Sbjct: 142 EAVLLICAFLVAFFPILSNTVQGLKSADHNLVDLFELYGASKSQQLRLLKIPTALPYFVA 201

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++        V +E            G+   I  A +  ++  +  A+L +      
Sbjct: 202 GLNIAGGLALIGSVVAEFTAGAAGSKA--GLAFRILEAGRRLNIPRLFAALLLITLTGVA 259

Query: 255 Y 255
            
Sbjct: 260 I 260


>gi|225175441|ref|ZP_03729436.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225169193|gb|EEG77992.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 244

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 15/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     +      +A+   LL       +  + R+L  V++ I   + +IP+L F  F +
Sbjct: 18  ILGAMLQHLKLSATALGFILLLGIPLGIIITRVRKLAPVIIGITGFLYTIPVLAFFGFVI 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                         E  A+ A+    +  +  + +  +  + + + + +R    +  Q  
Sbjct: 78  PVLGIG--------ERPALVALVIYGLLPLVRNTFVGITEVDKSVIDAARGMGATNLQLL 129

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P +V              V +  I      I   G+G+ I   I       
Sbjct: 130 RDVEIPLALPTIVAGFRT-------VTVMTISIATIAAFIGAGGLGTIILRGITTYHPEL 182

Query: 241 ILYAMLTMLGVIFLYD 256
           IL   + +  +    D
Sbjct: 183 ILAGAIPVAFLAITAD 198



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 5/170 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +    ++ IP+GI I     ++  I      L   P   FF  V+  +        +
Sbjct: 30  ATALGFILLLGIPLGIIITRVRKLAPVIIGITGFLYTIPVLAFFGFVIPVLGIGERPALV 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      ++ N   G +       + A     T  +  R + +P   P  V G 
Sbjct: 90  ALVIYGLL----PLVRNTFVGITEVDKSVIDAARGMGATNLQLLRDVEIPLALPTIVAGF 145

Query: 511 IT-ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
            T        A+I + + + G   +   G+  Y  E    G+ P   L +
Sbjct: 146 RTVTVMTISIATIAAFIGAGGLGTIILRGITTYHPELILAGAIPVAFLAI 195


>gi|172035039|ref|YP_001801540.1| quaternary amine ABC transporter periplasmic substrate-binding
           protein [Cyanothece sp. ATCC 51142]
 gi|171696493|gb|ACB49474.1| putative quaternary amine uptake ABC transporter (QAT) family,
           periplasmic substrate-binding protein [Cyanothece sp.
           ATCC 51142]
          Length = 512

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 73/195 (37%), Gaps = 12/195 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +L AM+++         + ++  +L   ++ + + +Q+IP L    F +    
Sbjct: 17  TGEHITLVLIAMIVATGMGIPLGIIMSRYPKLANPILLVTNAVQTIPSLALFGFLITVPF 76

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               GK       AI A+    +  +  + Y  +  I + ++E  +S  L+  +  + + 
Sbjct: 77  LGGIGKRP-----AIIALILYALLPIIKNTYIGITQIRKGVKEAGKSLGLTPLKILFLIE 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  ++  + ++        V    I      I   G+G +I   +   D   IL  
Sbjct: 132 LPLALKVILGGVRIA-------AVICVGIATIAAAIGGGGLGVFIFRGLSTVDNTMILAG 184

Query: 245 MLTMLGVIFLYDQLL 259
            +    +  L D  L
Sbjct: 185 AIPSAIIALLVDWGL 199



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 1/128 (0%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ +I+A+ + IP+GI +   P +++ I      +   P+   F  +++      +   
Sbjct: 24  VLIAMIVATGMGIPLGIIMSRYPKLANPILLVTNAVQTIPSLALFGFLITVPFLGGIGKR 83

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  L+++     I+ N   G +      KE   S  +T  +    I LP      + G
Sbjct: 84  PAIIALILY-ALLPIIKNTYIGITQIRKGVKEAGKSLGLTPLKILFLIELPLALKVILGG 142

Query: 510 AITACGGA 517
              A    
Sbjct: 143 VRIAAVIC 150


>gi|228474635|ref|ZP_04059366.1| hypothetical protein STAHO0001_1106 [Staphylococcus hominis SK119]
 gi|228271298|gb|EEK12666.1| hypothetical protein STAHO0001_1106 [Staphylococcus hominis SK119]
          Length = 211

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +K++R   V++ I  ++Q++P L  L   +  F           +  AI 
Sbjct: 32  VVAVPLGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ E   S  ++  Q    + +P ++P ++  + +S 
Sbjct: 84  ALFIYVLLPILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLIISGIRLSS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  I  G       G+G  +   +   +   I+ A + +  +  L D LL
Sbjct: 144 VYVISWATLASYIGAG-------GLGDLVFNGLNLYEPPMIISAAILVTCLALLIDFLL 195



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 71/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      ++ +   A +L   P      L++        
Sbjct: 20  FYISIISLLIAIVVAVPLGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  E  +S  +T  +  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++ C  
Sbjct: 136 ISGIRLSSVYVISWATLASYIGAG-------GLGDLVFNGLNLYEPPMIISAAILVTCLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LLIDFLL 195


>gi|284047040|ref|YP_003397380.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283951261|gb|ADB54005.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 281

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++   +AS+I +  G+ IG+   ++    P A L  + P     P+V+  +   
Sbjct: 79  FTVKNYLIGFTVASVIGVTFGLMIGWFQLLNKLFAPLAWLAYSVPKVAIAPVVILGLGLG 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +    + LL++F        N + GA      +      F  T W+  R I++P   P
Sbjct: 139 ATSKIAMVFLLVVFVVL----TNTMEGARTVDRSYVWAGRVFGYTKWQVLRRIVMPASAP 194

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y       A        I++E           TG+G  +  +       + +  VL+M  
Sbjct: 195 YIFAALERAVILGMIGEILAEYLG------SKTGIGVTLQRAAFDFRMDDAMAVVLVMVI 248

Query: 565 FVLALNRFL 573
             +     L
Sbjct: 249 VTITARVLL 257



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 87/266 (32%), Gaps = 17/266 (6%)

Query: 19  IFDLLAFVLVIGIIN--ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           I +L A + +  +    + L        P DI+      +   +       T    L   
Sbjct: 29  ILELAALLTLWQLAATTLGLLDPAFLPPPLDILQAFRELIAEETFLSSLWFTVKNYLIGF 88

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++ +    +  +    + L  +  P+  +  S+P +      ++        K+    L
Sbjct: 89  TVASVIGVTFGLMIGWFQLLNKLFAPLAWLAYSVPKVAIAPVVILGLGLGATSKIAMVFL 148

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             +F + T        +  +    + R      R F  + WQ    + +P S P +   +
Sbjct: 149 LVVFVVLT--------NTMEGARTVDRSYVWAGRVFGYTKWQVLRRIVMPASAPYIFAAL 200

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             ++  G    + +E +          GIG  +  A  +  +   +  +L M+ V  +  
Sbjct: 201 ERAVILGMIGEILAEYLGSKT------GIGVTLQRAAFDFRMDDAMAVVLVMVIV-TITA 253

Query: 257 QLLFRPMIVWSNKFRLERTTGIYPAD 282
           ++L R  I W   + +    G     
Sbjct: 254 RVLLRWAIRWFAPWYVASPIGRPGPR 279


>gi|327463804|gb|EGF10120.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1057]
          Length = 259

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIISILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIISILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|262066122|ref|ZP_06025734.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291380217|gb|EFE87735.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 514

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +    
Sbjct: 21  TIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITG 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + 
Sbjct: 81  VGNT--------TALIALIIYALLPIIRSTYTGIVTINPLIIEASEGMGSTKLQQLFKIK 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 133 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 185

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 186 SLLIAILALVFDFIL 200



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 49  YRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 104

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    I LP   P  ++G         N   ++   +  
Sbjct: 105 GIVTINPLIIEASEGMGSTKLQQLFKIKLPLALPVLMSGIR-------NMVTMTIALAGI 157

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  +     ++
Sbjct: 158 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNHKRIKYKI 217


>gi|150020769|ref|YP_001306123.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
 gi|149793290|gb|ABR30738.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
          Length = 241

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 102/241 (42%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I+ +  F+++  I+ +++        P ++  I    +   +  +    T ++ +  +  
Sbjct: 4   IYGIFLFLIIWYILALIIQSPIILPTPLEVGRIFIALILSKNTWESIYNTLIKGIFVLFF 63

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L    ++  +    ++   +L P   I+QS+PI+ +L   +  +     G +I + L+ 
Sbjct: 64  TLTLGSIFGFIMGICKKCFELLRPTFTIIQSVPIISWLALVMFVWGIGLTGPIIISTLSL 123

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I         N+TFS+ Q + N  + L E+++++ +   +    +     +P L+  + +
Sbjct: 124 IP--------NVTFSVAQGVRNTDKKLLEMAKTYNVPKGKIIKDIYFGSIIPFLLSALEV 175

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                W  V+ SE +   +      GIG  I+ A +  D   +    +  + +    ++L
Sbjct: 176 ISGNLWKVVIVSEYLAGKE------GIGVQISWARQYVDTPKVYALTIIAVILGISTERL 229

Query: 259 L 259
           +
Sbjct: 230 I 230



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 83/235 (35%), Gaps = 11/235 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
             ++  I W+ +   +   I   +   +   F    +    W     T+ + + ++    
Sbjct: 6   GIFLFLIIWYILALIIQSPIILPTPLEVGRIFIALILSKNTWESIYNTLIKGIFVLFFTL 65

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            +    G  +G        ++P   ++ + P   +  LV+         P +  +L +I 
Sbjct: 66  TLGSIFGFIMGICKKCFELLRPTFTIIQSVPIISWLALVMFVWGIGLTGPIIISTLSLIP 125

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                + F+V  G         E+A ++++   +  + I    I P+ ++      G  W
Sbjct: 126 ----NVTFSVAQGVRNTDKKLLEMAKTYNVPKGKIIKDIYFGSIIPFLLSALEVISGNLW 181

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              IVSE  +         G+G  I+ + +    P+V    +I     ++  R +
Sbjct: 182 KVVIVSEYLAGKE------GIGVQISWARQYVDTPKVYALTIIAVILGISTERLI 230


>gi|229159806|ref|ZP_04287813.1| ABC transporter, permease [Bacillus cereus R309803]
 gi|228623545|gb|EEK80364.1| ABC transporter, permease [Bacillus cereus R309803]
          Length = 247

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +++L+ + L   T++ V++ 
Sbjct: 5   VPAITLSSILLVMWEIGARIVDEMYILPSPSAIVIKIWKLKEILFTVHLPA-TLYVVLIG 63

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +II+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 64  VIISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 119

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 120 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 179

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 180 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 233



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  ++IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 52  HLPATLYVVLIGVIISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 111

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 112 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 163

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 164 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 217

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 218 PIVLLSLLAIFFVILI 233


>gi|39935111|ref|NP_947387.1| putative ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|39648962|emb|CAE27483.1| putative ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 264

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   ++  +I S   + VG W   +P +++   P+ +++ A P  V  P+    +   
Sbjct: 65  ITLQESLLAFVIGSFAGVLVGFWFARQPRVAAVFDPYVKMVNALPRVVLAPIFTLWLGLG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F   + +      G         + A    ++  +  R++  P    
Sbjct: 125 IWSKVALGVTLVFFVVFFNVY----QGVKETSATLVDNARMLGMSERQMMRHVFWPSALS 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   TA G A   ++V E            GLG  I ++        V  G+ ++  
Sbjct: 181 WMFSSLHTAIGFAVVGAVVGEYLG------AAAGLGYLIQQAEGTFDVAGVFAGMFVLSV 234

Query: 565 FVLALN---------RFLWHP 576
           FV+ ++           +W P
Sbjct: 235 FVILIDLAVSLVERRLLVWRP 255



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 86/227 (37%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P D+   V        + ++   T    L A VI      +     A+  R+  V  P
Sbjct: 41  STPVDVAKQVIAWFASGVIWKHLWITLQESLLAFVIGSFAGVLVGFWFARQPRVAAVFDP 100

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++ ++P +       ++              + +    T   + + F++YQ +    
Sbjct: 101 YVKMVNALPRVVLAPIFTLWLGLGI--------WSKVALGVTLVFFVVFFNVYQGVKETS 152

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L + +R   +S  Q   ++  P ++  +  ++  ++    F VV +   VVG+ +   
Sbjct: 153 ATLVDNARMLGMSERQMMRHVFWPSALSWMFSSLHTAIG---FAVVGA---VVGEYLGAA 206

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
            G+G  I  A    D+  +   M  +   + L D    L+ R ++VW
Sbjct: 207 AGLGYLIQQAEGTFDVAGVFAGMFVLSVFVILIDLAVSLVERRLLVW 253


>gi|310657351|ref|YP_003935072.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium sticklandii DSM 519]
 gi|308824129|emb|CBH20167.1| Binding-protein-dependent transport systems inner membrane
           component [Clostridium sticklandii]
          Length = 206

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 11/204 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F       ++ +       V++ +II+ ++ + +GI I     ++  I   A +L  
Sbjct: 3   IIEFFISRWDAILQMTISHFSIVILAMIISIVLGVIIGILITNNKQLAKLILNIANILMT 62

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F +++  +          L L     TQ  I+ NV  G         E A    
Sbjct: 63  IPSLALFSVLIPIMGIGKAPAIAGLVLY----TQLPIIRNVYTGIITIDPSIIEAAKGMG 118

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++  +    I +P  FP  + G  TA         ++     G       GLG YI +  
Sbjct: 119 LSNSKIMLKIKIPLAFPVIMAGLRTATVMGIGIGAIAAYIGAG-------GLGEYIFQGI 171

Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571
            +G+   +++G +++    + +++
Sbjct: 172 NRGNDRMIIIGAIMVSLITILVDK 195



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 15/199 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             ++ Q        ++ AM+IS++   +   L   +++L  +++ I +I+ +IP L   +
Sbjct: 11  WDAILQMTISHFSIVILAMIISIVLGVIIGILITNNKQLAKLILNIANILMTIPSLALFS 70

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +              +  AI  +       +  ++Y  +  I   + E ++   LS  
Sbjct: 71  VLIPIMGIG--------KAPAIAGLVLYTQLPIIRNVYTGIITIDPSIIEAAKGMGLSNS 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P + P ++  +  +        V    I      I   G+G YI   I   +
Sbjct: 123 KIMLKIKIPLAFPVIMAGLRTA-------TVMGIGIGAIAAYIGAGGLGEYIFQGINRGN 175

Query: 238 LLAILYAMLTMLGVIFLYD 256
              I+   + +  +  L D
Sbjct: 176 DRMIIIGAIMVSLITILVD 194


>gi|316935664|ref|YP_004110646.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315603378|gb|ADU45913.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 279

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 15/202 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T    ++  +I SI     G+ +   P  ++ ++P    L   P     PL+V      
Sbjct: 91  VTAKESILGFLIGSIAGSAAGLLLWLSPTAAAVLRPLLIALNGLPKIALAPLIVVWFGVG 150

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +     +++         +    AG      D+ ++  +   + ++ +R +I PG  P
Sbjct: 151 IESKIAVAAIITFIVA----MITSYAGTQEIDGDYLKMLKALGASRFQMFRIVIAPGSLP 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +      G A   ++V E  S         GLG  I  +    +   V  G+L +  
Sbjct: 207 WIASAFRLNIGFAMIGAVVGEYIS------ADQGLGYQIYYAGTLYNLNAVWGGILALML 260

Query: 565 FVLALNRFLWHPLYLYGTRCLR 586
             L L+  +      +  R ++
Sbjct: 261 LALLLDGLV-----GWVERRMK 277



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 14/216 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I   +   L   SL      T    +   +I  +       L   S     VL P+
Sbjct: 68  QPTGIWRELAKGLTTGSLLNDTWVTAKESILGFLIGSIAGSAAGLLLWLSPTAAAVLRPL 127

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           L  +  +P +      VV+F      K+  A +        +         Y     I  
Sbjct: 128 LIALNGLPKIALAPLIVVWFGVGIESKIAVAAIITFIVAMITS--------YAGTQEIDG 179

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D  ++ ++   S +Q F  +  P S+P +     +++       V  E I          
Sbjct: 180 DYLKMLKALGASRFQMFRIVIAPGSLPWIASAFRLNIGFAMIGAVVGEYIS------ADQ 233

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+G  I  A    +L A+   +L ++ +  L D L+
Sbjct: 234 GLGYQIYYAGTLYNLNAVWGGILALMLLALLLDGLV 269


>gi|308175121|ref|YP_003921826.1| Glycine betaine/carnitine/choline transport system permease opuCD
           [Bacillus amyloliquefaciens DSM 7]
 gi|307607985|emb|CBI44356.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCD [Bacillus amyloliquefaciens DSM 7]
          Length = 217

 Score = 78.0 bits (191), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L A++  +L       L  + +R    ++ I++I+Q++P L  L F
Sbjct: 13  GELLYKTWEHLYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ A+ A+F   V  +  + Y  +  + R L E  +   ++ W+
Sbjct: 73  FIPLLGVG--------KVPAVAALFFYSVLPILRNTYTGILGVNRHLLESGKGIGMTAWE 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  +  S      +   +  I  G       G+G YI + +     
Sbjct: 125 QIRLVELPLAAPVIMAGIRTSAIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQP 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+   + +  +    D LL
Sbjct: 178 EYIIAGAVPVTMLAAAVDCLL 198



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 5/183 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ ++   +  +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +     + F +   IL N   G         E      +T W   R + LP   P  
Sbjct: 81  --KVPAVAALFFYSVLPILRNTYTGILGVNRHLLESGKGIGMTAWEQIRLVELPLAAPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G  T+       + ++     G +      GL  Y  E    G+ P  +L   + C  
Sbjct: 139 MAGIRTSAIYLIGWATLASFIGGGGLGDYIFIGLNLYQPEYIIAGAVPVTMLAAAVDCLL 198

Query: 566 VLA 568
            + 
Sbjct: 199 GMT 201


>gi|294668518|ref|ZP_06733615.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309481|gb|EFE50724.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 505

 Score = 78.0 bits (191), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF     
Sbjct: 40  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ---- 95

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
               + Y  L  I + +++   +F LS WQ  W + +P ++P ++  +  +
Sbjct: 96  ----NTYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTA 142



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 4/108 (3%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               R   +  +  F  +L   P+     L++  V        + L+L  +      I  
Sbjct: 40  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQ 95

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           N   G +      ++  ++F ++ W+    I LP   P  ++G  TA 
Sbjct: 96  NTYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTAA 143


>gi|282865836|ref|ZP_06274886.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282559480|gb|EFB65032.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 300

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  +V  II  +  + +GI +G    +S  + P+ ++L A P  V  P+ +       
Sbjct: 104 TLYEALVGWIIGVVAGVILGIALGRVRFLSDVLGPYIKVLNALPRIVLAPIFLIWFGLGP 163

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    A     +  +    +++P    +
Sbjct: 164 ASKIASAVVLVFFPVF----FNAFQGAREVDRNLVANARILGASNRQVTFQVVIPSATSW 219

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T    + G A   +IV E          T GLG  ++ S    +   V   ++I+   
Sbjct: 220 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNAAGVYAAMVILAVV 273

Query: 566 VLA---LNRFLWHPLYLY 580
            L    L  FL   L+ +
Sbjct: 274 ALLAEALLSFLERSLFRW 291



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +    T    L   +I ++   +      + R L  VL P + ++ ++P +     
Sbjct: 95  GTLWEQIWYTLYEALVGWIIGVVAGVILGIALGRVRFLSDVLGPYIKVLNALPRIVLAPI 154

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+  A +   F +         F+ +Q    + R+L   +R    S  Q
Sbjct: 155 FLIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGASNRQ 206

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +   +  ++ +S        +  E I          G+G  ++ +    + 
Sbjct: 207 VTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNA 260

Query: 239 LAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +  AM+ +  V  L       L R +  W
Sbjct: 261 AGVYAAMVILAVVALLAEALLSFLERSLFRW 291


>gi|170691738|ref|ZP_02882902.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143022|gb|EDT11186.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 285

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 20/252 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++AF  +      L          P  I D +   +  + L      T    +   V   
Sbjct: 40  VVAFFAIWEGAARLGWVSNFLVGSPAKIFDALLRDIRSYQLFVDTGYTLFEAILGFVFGT 99

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV-IGAELAAI 139
               V       S  +  ++ P +  + S+P + F    +++F      KV +   L AI
Sbjct: 100 AVGSVCGLALWYSPFVARLIEPFIVAINSVPKIAFAPIVILWFGTGLISKVALAISLTAI 159

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+          + Y++  +   DL+ +  +        F  + VPF++P ++    ++
Sbjct: 160 VAL---------IAAYEAAKDADPDLQALLVTLGADKNDVFMKVVVPFTLPYVISTFRIN 210

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYD 256
           +  G    V  E I          G+G  I  A    DL  +   L+ ++ +  V++   
Sbjct: 211 VGFGLVGAVVGEFIS------SEKGLGHMIFTASSLYDLNTVWEGLFVLMAIGFVLYFLI 264

Query: 257 QLLFRPMIVWSN 268
            L+ R ++ W  
Sbjct: 265 DLVERKLLPWRQ 276



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 17/242 (7%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------YVIWLGCITM 387
              + +  +  +  F  +   A  + W S   + +     D L        +      T+
Sbjct: 29  GWGRSLLQLAAVVAFFAIWEGAARLGWVSNFLVGSPAKIFDALLRDIRSYQLFVDTGYTL 88

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           F  ++  +  + +    G+ + + P ++  I+PF   + + P   F P+V+       ++
Sbjct: 89  FEAILGFVFGTAVGSVCGLALWYSPFVARLIEPFIVAINSVPKIAFAPIVILWFGTGLIS 148

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                  L         L      A     D + +  +        +  +++P   PY +
Sbjct: 149 KVALAISLTAIVA----LIAAYEAAKDADPDLQALLVTLGADKNDVFMKVVVPFTLPYVI 204

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +      G     ++V E  S         GLG  I  ++       V  G+ ++     
Sbjct: 205 STFRINVGFGLVGAVVGEFISSEK------GLGHMIFTASSLYDLNTVWEGLFVLMAIGF 258

Query: 568 AL 569
            L
Sbjct: 259 VL 260


>gi|251792793|ref|YP_003007519.1| glycine betaine [Aggregatibacter aphrophilus NJ8700]
 gi|247534186|gb|ACS97432.1| glycine betaine [Aggregatibacter aphrophilus NJ8700]
          Length = 491

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF     
Sbjct: 26  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ---- 81

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
               + Y  L  I + +++   +F LS WQ  W + +P ++P ++  +  +
Sbjct: 82  ----NTYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTA 128



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 58/179 (32%), Gaps = 13/179 (7%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               R   +  +  F  +L   P+     L++  V        + L+L  +      I  
Sbjct: 26  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQ 81

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      ++  ++F ++ W+    I LP   P  ++G  TA       + ++ +
Sbjct: 82  NTYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTAAVLIVGTATLAAL 141

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
              G +               ++ +      G L+     + ++  +   L     R L
Sbjct: 142 IGAGGLGNLIL-------LGIDRNNMTMTFTGALLSALLAVGVSGII--RLLQKSRRKL 191


>gi|160902588|ref|YP_001568169.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160360232|gb|ABX31846.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 216

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 17/197 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                    S+  I+++          +    + G + + I  I Q++P +  +    ++
Sbjct: 18  TMEHLYLFASSWAIAIVVGMAIGIYVTRPGKEKSGRIALSITGIAQAVPSIAVIALVFLF 77

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AIFA+F   +  +TF+    L  I + ++E +R   ++  +  W 
Sbjct: 78  MGIG--------PAPAIFALFLYSIVPITFNTASGLFGIDKGMKEAARGMGMTKREILWK 129

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P +   +  +          +  I  G       G+G  I + +       IL
Sbjct: 130 VEIPNAIPTIFSGIRNAAIINLGTATIASAIGAG-------GLGELIFIGLGTFKFEMIL 182

Query: 243 YAMLTMLGVIFLYDQLL 259
              + +  +  L D +L
Sbjct: 183 AGAIPVSIMAVLIDFIL 199



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 58/208 (27%), Gaps = 17/208 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI------SSKIQPFAQLL 425
            +  V   +    I     + L   +  I I VG+ IG                    + 
Sbjct: 3   FFTYVAENLGYMGIKTMEHLYLFASSWAIAIVVGMAIGIYVTRPGKEKSGRIALSITGIA 62

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P+     LV   +              +   +   I FN  +G        KE A  
Sbjct: 63  QAVPSIAVIALVFLFMGIGPA----PAIFALFLYSIVPITFNTASGLFGIDKGMKEAARG 118

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T       + +P   P   +G   A       + ++     G       GLG  I  
Sbjct: 119 MGMTKREILWKVEIPNAIPTIFSGIRNAAIINLGTATIASAIGAG-------GLGELIFI 171

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 F  ++ G + +    + ++  L
Sbjct: 172 GLGTFKFEMILAGAIPVSIMAVLIDFIL 199


>gi|329940018|ref|ZP_08289300.1| ABC-transport protein, membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329300844|gb|EGG44740.1| ABC-transport protein, membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 291

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 18/224 (8%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q+  +I +      +   IW    T+   ++  +   +  + +GI +G    ++  + P+
Sbjct: 76  QTWTWITHGTALGSLGEQIWY---TLQEALLGWVFGVVAGVVLGIALGRIAFLADILGPY 132

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            ++L + P  V  P+ V        +      +L+ F       FN   GA     +   
Sbjct: 133 IKVLNSIPRIVLAPIFVIWFGLGPASKIASAVVLVFFPVF----FNAFQGAREVDRNLVA 188

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A        R    +++P    +  T    + G A   +IV E          T G+G 
Sbjct: 189 NARILGAGDRRVTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGL 242

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            +A+S    +   V   ++I+    L     L      +  R +
Sbjct: 243 LVAQSQGTFNAAGVYAAMVILAAVALVAEGLL-----TFAERRI 281



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
              + SL +    T    L   V  ++   V      +   L  +L P + ++ SIP + 
Sbjct: 84  GTALGSLGEQIWYTLQEALLGWVFGVVAGVVLGIALGRIAFLADILGPYIKVLNSIPRIV 143

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V++F      K+  A +   F +         F+ +Q    + R+L   +R    
Sbjct: 144 LAPIFVIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGA 195

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
              +  + + +P +   +  ++ +S        +  E I          GIG  +A +  
Sbjct: 196 GDRRVTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVAQSQG 249

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +   +  AM+ +  V  + + LL    R +  W
Sbjct: 250 TFNAAGVYAAMVILAAVALVAEGLLTFAERRIFRW 284


>gi|315648305|ref|ZP_07901406.1| hypothetical protein PVOR_23664 [Paenibacillus vortex V453]
 gi|315276951|gb|EFU40294.1| hypothetical protein PVOR_23664 [Paenibacillus vortex V453]
          Length = 218

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q        +L +M+++++    +  L ++ + L  + +    I+Q+IP L  L F +
Sbjct: 21  LIQSLGVHIQLVLISMLLAVIIGIAFGILISRIKALKGITLGTAGILQTIPSLAMLGFMI 80

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F              AI A+F   +  +  + Y  +  + + + E +R   +   Q  
Sbjct: 81  PLFGIGM--------KTAIAALFLYSLLPIIRNTYAGITEVDKSVVEAARGMGMKSGQIL 132

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P +M  ++  +  +          +  I  G       G+G +I L I+      
Sbjct: 133 FKVQLPLAMSVIMAGIRTAAVINVGTATLAAFIGAG-------GLGEFIFLGIQRNIEAL 185

Query: 241 ILYAMLTMLGVIFLYDQLL 259
            L   +    +  + D LL
Sbjct: 186 TLMGAIPAALLALVIDYLL 204



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ +++A II I  GI I     +       A +L   P+      ++           
Sbjct: 32  VLISMLLAVIIGIAFGILISRIKALKGITLGTAGILQTIPSLAMLGFMIPLFGIG----M 87

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 +   +   I+ N  AG +       E A    +   +    + LP      + G
Sbjct: 88  KTAIAALFLYSLLPIIRNTYAGITEVDKSVVEAARGMGMKSGQILFKVQLPLAMSVIMAG 147

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA       + ++     G       GLG +I    ++      ++G +      L +
Sbjct: 148 IRTAAVINVGTATLAAFIGAG-------GLGEFIFLGIQRNIEALTLMGAIPAALLALVI 200

Query: 570 NRFL 573
           +  L
Sbjct: 201 DYLL 204


>gi|312866168|ref|ZP_07726389.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           downei F0415]
 gi|311098572|gb|EFQ56795.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           downei F0415]
          Length = 311

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 25/213 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S L    +A  AA        +R   +L P ++++  IP + +    L   V +
Sbjct: 92  FIVTILSALIATPFAIGAAIFMTEISPKRGARLLQPTIELLTGIPSVVYGFIGLQVVVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L+ G   G  L+ +F +F   +  +TF    SL ++PR   E S +   + WQ  W 
Sbjct: 152 VRTLFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRSVPRHYREASLAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +  + PG+   ++  M+  +   +A +M+V                 T +   GIG+ 
Sbjct: 211 VVLRAAKPGIFTAVVFGMARAFGEALAIQMVVGNSPVMPTSLITPASTLTSVLTMGIGNT 270

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   ++   L ++   +L M     +  + + R
Sbjct: 271 VMGTVQNNVLWSLALVLLIMSLAFNMLMKFITR 303



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 33/215 (15%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVF--------FPL 436
            ++ I++++I  P  +G  I          +  +QP  +LL   P+ V+         P 
Sbjct: 92  FIVTILSALIATPFAIGAAIFMTEISPKRGARLLQPTIELLTGIPSVVYGFIGLQVVVPF 151

Query: 437 VVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           V +      + +   +++  +MI  T   + F       + P  ++E + +   T W+  
Sbjct: 152 VRTLFGGTGFGILSGVFVLFVMILPT---VTFMTTDSLRSVPRHYREASLAMGATRWQTI 208

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------------GLG 540
             ++L    P   T  +     A+  ++  ++       + T+              G+G
Sbjct: 209 WRVVLRAAKPGIFTAVVFGMARAFGEALAIQMVVGNSPVMPTSLITPASTLTSVLTMGIG 268

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +  + +      + L +LIM      L +F+  
Sbjct: 269 NTVMGTVQNNVLWSLALVLLIMSLAFNMLMKFITR 303


>gi|297563424|ref|YP_003682398.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847872|gb|ADH69892.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 281

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 84/257 (32%), Gaps = 17/257 (6%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVV 392
           R+S  L      V+ G A     +   Y++           +D L  +     T+   + 
Sbjct: 30  RLSVWLPTAVAVVIVGFAWSATAEDQPYLLPPLAEVGGILVEDPLLFVNNAWATLSIALT 89

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +   +     + + +   P +   I P A +L   P     P +V    +         
Sbjct: 90  GVAFGAGTAFVLALLMSEIPLLRRAIMPLAVILNVTPVIAIAPALVVAFGFG----MTPK 145

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++    T + +L NV  G  +       V S+ H +       + +P   PY +     
Sbjct: 146 VIVTAIITFFPVLINVTTGLRSVSRPVLHVFSTLHASRLEVLLRLRIPSSLPYTLAALRV 205

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV---LIMCCFVLAL 569
               +   ++V+E  + G     ++GLG  I  S        V   V    +M   +LAL
Sbjct: 206 VFPLSIVGAVVAEFVAAG----SSSGLGTMIRNSAATARLEYVYAAVACLAVMGVLMLAL 261

Query: 570 NRFLWHPLYLYGTRCLR 586
              L   L  +     R
Sbjct: 262 ITVLERRLLFWHESQQR 278



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 15/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               V+++G         Q   +P        +  D       A  T    L+ +     
Sbjct: 37  TAVAVVIVGFAWSATAEDQPYLLPPLAEVGGILVEDPLLFVNNAWATLSIALTGVAFGAG 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A L ++   L   ++P+  I+   P++      VV F      KVI   +   F 
Sbjct: 97  TAFVLALLMSEIPLLRRAIMPLAVILNVTPVIAIAPALVVAFGFGMTPKVIVTAIITFF- 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++   L ++ R +  V  +   S  +    L +P S+P  +  + +   
Sbjct: 156 -------PVLINVTTGLRSVSRPVLHVFSTLHASRLEVLLRLRIPSSLPYTLAALRVVFP 208

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258
                 V +E +  G +     G+G+ I  +     L  +  A+     M  ++     +
Sbjct: 209 LSIVGAVVAEFVAAGSSS----GLGTMIRNSAATARLEYVYAAVACLAVMGVLMLALITV 264

Query: 259 LFRPMIVWSN 268
           L R ++ W  
Sbjct: 265 LERRLLFWHE 274


>gi|206968088|ref|ZP_03229044.1| putative ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|229068411|ref|ZP_04201712.1| ABC transporter, permease [Bacillus cereus F65185]
 gi|229078037|ref|ZP_04210645.1| ABC transporter, permease [Bacillus cereus Rock4-2]
 gi|229177256|ref|ZP_04304640.1| ABC transporter, permease [Bacillus cereus 172560W]
 gi|229188934|ref|ZP_04315964.1| ABC transporter, permease [Bacillus cereus ATCC 10876]
 gi|206737008|gb|EDZ54155.1| putative ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|228594537|gb|EEK52326.1| ABC transporter, permease [Bacillus cereus ATCC 10876]
 gi|228606135|gb|EEK63572.1| ABC transporter, permease [Bacillus cereus 172560W]
 gi|228705276|gb|EEL57654.1| ABC transporter, permease [Bacillus cereus Rock4-2]
 gi|228714553|gb|EEL66427.1| ABC transporter, permease [Bacillus cereus F65185]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 236



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 221 PIVLLSLLAIFFVVII 236


>gi|167902793|ref|ZP_02489998.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 280

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 80/202 (39%), Gaps = 10/202 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L    + +   F    LAA +R    +L  +  +   +P +  L   +++F    
Sbjct: 82  SLSMLLRGYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLPSIALLPLALLWFGLGT 141

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    + +F +  + +W +  S +     +P  L  V R++ L+G +    + VP 
Sbjct: 142 G--------SLLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPA 193

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  + ++ +  W  ++A+E++            G YI     E     +   +  
Sbjct: 194 ALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNELYTDRVFAGLAA 251

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
           ++ +  + +  +F  +   S K
Sbjct: 252 VIAIGLVVEHGVFDALERVSVK 273



 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 84/275 (30%), Gaps = 9/275 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +  + +L   LGV R    +   +      +    +I    V   + +     +     +
Sbjct: 9   AAPLARLYARLGVRRLRDAQWLRKTALALALIAAWEIVARVVDDDLLLPSFGATALAFAH 68

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                ++   I +    + R      +   +   +             +     +    P
Sbjct: 69  GVANGELQAKIAVSLSMLLR---GYALGVALAFALTALAATTRLGRDLLTMLTAMFNPLP 125

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +    PL +        +    L  +++    W +  +  AG  A P   + V  ++ +T
Sbjct: 126 SIALLPLALLWFGLGTGS----LLFVLVHAVLWPLALSTFAGFQAVPATLRMVGRNYGLT 181

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G R    I++P   P  + G   A   AW   I +E+             G YI ++  +
Sbjct: 182 GVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELVFGASAGGGGL--GWYIFQNRNE 239

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                V  G+  +    L +   ++  L     + 
Sbjct: 240 LYTDRVFAGLAAVIAIGLVVEHGVFDALERVSVKR 274


>gi|229165668|ref|ZP_04293436.1| ABC transporter, permease [Bacillus cereus AH621]
 gi|228617669|gb|EEK74726.1| ABC transporter, permease [Bacillus cereus AH621]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAIPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILV 236



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L A +L   ++ +   G +       +     I + + +L       +   T   +L  +
Sbjct: 8   LPALILSGILLALWEVGARIVDEMYILPSPSAIVMKIWALKDILFTVHLPATLYVVLIGV 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++     A L   S  +     P+L   Q+IPI       V++F             
Sbjct: 68  VISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGY--------TIW 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  + Y  L +  ++ EE+  ++  +    F  L +P ++P     +
Sbjct: 120 SKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALPYFFSAL 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   + 
Sbjct: 180 KIAIPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFV 233

Query: 257 QLL 259
            L+
Sbjct: 234 ILV 236


>gi|332981989|ref|YP_004463430.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
 gi|332699667|gb|AEE96608.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
          Length = 271

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 92/241 (38%), Gaps = 17/241 (7%)

Query: 22  LLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           L+   L+ G       GI +   T+ P  I+  +    +   L  +   T    +   ++
Sbjct: 33  LILIGLIAGWEAAADLGIIDPFITSQPSKILTTIIDLHNDGQLYNHIWATVAETMVGFIV 92

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              F  + A     S  +  +L P L ++ S+P        +V+  N         +LA 
Sbjct: 93  GTAFGTLIAIGLWWSDYVCKILDPYLVVLNSLPKPALGPILIVWLGNG--------KLAI 144

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I       +     ++      + ++  ++ ++F  S  Q    + +P S+P ++  + +
Sbjct: 145 IAMALLISLIVTIITVLNGFLEVDKNKIKLLQTFGASKAQILTKVILPASVPTVISALKI 204

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W  V+  E +V  +      G+G  I    +  +L  ++ +++ +  V  +  Q 
Sbjct: 205 NVGLSWVGVIMGEFLVSKE------GLGYLIIYGSQVFELDLVMSSVIILAIVAAIMYQA 258

Query: 259 L 259
           +
Sbjct: 259 V 259



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 68/181 (37%), Gaps = 10/181 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   +V  I+ +     + I + +  ++   + P+  +L + P     P+++  +   
Sbjct: 81  ATVAETMVGFIVGTAFGTLIAIGLWWSDYVCKILDPYLVVLNSLPKPALGPILIVWLG-- 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N  L +  + +  +    +  V+ G      +  ++  +F  +  +    +ILP   P
Sbjct: 139 --NGKLAIIAMALLISLIVTIITVLNGFLEVDKNKIKLLQTFGASKAQILTKVILPASVP 196

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             ++      G +W   I+ E        +   GLG  I   ++      V+  V+I+  
Sbjct: 197 TVISALKINVGLSWVGVIMGEFL------VSKEGLGYLIIYGSQVFELDLVMSSVIILAI 250

Query: 565 F 565
            
Sbjct: 251 V 251


>gi|262044449|ref|ZP_06017509.1| ABC superfamily ATP binding cassette transporter [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|259038203|gb|EEW39414.1| ABC superfamily ATP binding cassette transporter [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
          Length = 246

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 16/231 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R++         +L+ G+ +    GI    +P  +     + ++   L  +   T   +L
Sbjct: 4   RLWRGGMVFGGLMLLWGLASR--SGIPHFLLPSPMAVAEALWVNRAYLGWHTLITLSEIL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S + + +      A     S RL   L+P++   Q+IP+       V++       KV  
Sbjct: 62  SGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQAIPVFALAPLLVLWLGFGMSAKVAM 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F         +T + +  L  + ++  +++RS   S   +  ++ +  ++P L 
Sbjct: 122 AVLVIFF--------PVTSAFFDGLRRVNQEYLDLARSMNASFGAQLRHVRLMAALPALG 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             + M+ +      VA    ++G+ V    G+G  +  A           A
Sbjct: 174 SGLRMAAA------VAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAA 218



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + +  Y+ W   IT+  ++  + +   + + + + +   P +   + P      A
Sbjct: 38  VAEALWVNRAYLGWHTLITLSEILSGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQA 97

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+V  +  + ++  + +++L+IF   + +      G      ++ ++A S +
Sbjct: 98  IPVFALAPLLVLWLG-FGMSAKVAMAVLVIF---FPVTSAFFDGLRRVNQEYLDLARSMN 153

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +     R++ L    P   +G   A   A   +I+ E            GLG  +  + 
Sbjct: 154 ASFGAQLRHVRLMAALPALGSGLRMAAAVAPIGAIIGEWVG------SAEGLGYVMLNAN 207

Query: 548 EKGSFPEVVLG 558
            +         
Sbjct: 208 ARLQTDICFAA 218


>gi|332363574|gb|EGJ41355.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1059]
          Length = 259

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAVLMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIISILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAVLMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIISILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|254502632|ref|ZP_05114783.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222438703|gb|EEE45382.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 306

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 97/280 (34%), Gaps = 6/280 (2%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           ++   +  +  +     +P   +V      L   R    E   +      +  +   FW 
Sbjct: 9   QRRQQIMTLDIADKRAIAPAPQSVPLDAEELKRARAARREAIGRWVLPIVILVLSVYFWD 68

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +     I         +V      D   +      T+      ++IA++  + + +   
Sbjct: 69  RLCVWNEIPHYILPRPGLVFETLLADWGILSIALINTLKITFGALLIATLGGLGLAVLFT 128

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               I     PFA +L           +   +  Y  +    L +       + IL N  
Sbjct: 129 QSKWIEISFFPFAVILQ----VTPIIAIAPLILIYVDSITAGLLICAWIVAFFPILSNTT 184

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G ++  ++ + +   +  + W+  R++ LP   PY++ G   A G +   +IV+E  + 
Sbjct: 185 LGLNSADHNLQNLFRLYGASRWQTLRFLRLPASMPYFLGGLKIAGGLSLIGAIVAEFVAG 244

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  +GL   I E++ + + P +   ++++    + +
Sbjct: 245 SA--GSGSGLANQILEASYRLNMPRMFAALILISVTGVLI 282



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINI----LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
             + L   +LV+ +       + + I    +PR  +    +  D   L      T     
Sbjct: 51  GRWVLPIVILVLSVYFWDRLCVWNEIPHYILPRPGLVFETLLADWGILSIALINTLKITF 110

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A++I+ L     A L  +S+ + +   P   I+Q  PI+      ++Y  ++  G +I 
Sbjct: 111 GALLIATLGGLGLAVLFTQSKWIEISFFPFAVILQVTPIIAIAPLILIYVDSITAGLLIC 170

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A + A F I +        +    L +   +L+ + R +  S WQ   +L +P SMP  +
Sbjct: 171 AWIVAFFPILS--------NTTLGLNSADHNLQNLFRLYGASRWQTLRFLRLPASMPYFL 222

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++        + +E +          G+ + I  A    ++  +  A++ +     
Sbjct: 223 GGLKIAGGLSLIGAIVAEFVAGSAGSGS--GLANQILEASYRLNMPRMFAALILISVTGV 280

Query: 254 LY 255
           L 
Sbjct: 281 LI 282


>gi|256752429|ref|ZP_05493288.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914945|ref|ZP_07132261.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307723821|ref|YP_003903572.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
 gi|320116453|ref|YP_004186612.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|256748698|gb|EEU61743.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889880|gb|EFK85026.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307580882|gb|ADN54281.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
 gi|319929544|gb|ADV80229.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 270

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 83/242 (34%), Gaps = 16/242 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIG------IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +   + L I +F     VA+       +  Q    +    T      +     +T+   +
Sbjct: 28  RVTQFALLILFFATWEIVAMYKIVDPFLVSQPSRMLKTIITLSQNGSLFMHIWVTLSETI 87

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   + +II + + I + +   +S   +P+  +L + P     P+ +  +     N    
Sbjct: 88  IGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLNSLPKIALGPIFIVWMG----NGEAP 143

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  + +  +    + ++  G      +  ++  +F  T  +     ILP   P  ++   
Sbjct: 144 IITMALAISLIVTIISLQTGFKEVDEEKIKLLKTFGATKMQILTKCILPASVPTIISAIK 203

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G +W   I  E        +   GLG  I    +      V+  VLI+      +  
Sbjct: 204 INIGLSWVGVITGEFL------VSKAGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYI 257

Query: 572 FL 573
           F+
Sbjct: 258 FI 259



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       SL  +   T    +    +  +   + A L   S  L  V  P
Sbjct: 57  SQPSRMLKTIITLSQNGSLFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLQTGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ ++L +  +  L    +
Sbjct: 223 AGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYIFI 259


>gi|316932508|ref|YP_004107490.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315600222|gb|ADU42757.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 272

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+   + I++ + +  GI IG  P  ++ +  F  + +  P     P++   +  
Sbjct: 76  LASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ GT   ++ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GENSK----IALIVIGTLPAMIRDLAMRVMELPREQLIKAQTLGASTWQIALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +        +GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIDSLRLQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVIIPYVVWIT 245

Query: 564 CFVLALN---RFLWHPLYLY 580
                ++   R +    + +
Sbjct: 246 LLAFLMDLALRLIQRKAFPW 265



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 17/216 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ +A+ IS     V+  +         +L   + +   +P L  L    
Sbjct: 71  LWTDTLASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I    +  M   +   +  +PR+    +++   S WQ  
Sbjct: 131 IVMGLG--------ENSKIALIVIGTLPAMIRDLAMRVMELPREQLIKAQTLGASTWQIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ + +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDS------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLE 273
           I+  ++ +  + FL D   +L+ R    W    R E
Sbjct: 237 IIPYVVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272


>gi|257893323|ref|ZP_05672976.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
 gi|257829702|gb|EEV56309.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
          Length = 222

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 188

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 189 AGALPTALMAIITDWLL 205


>gi|289577868|ref|YP_003476495.1| binding-protein-dependent transporters inner membrane component
           [Thermoanaerobacter italicus Ab9]
 gi|289527581|gb|ADD01933.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter italicus Ab9]
          Length = 270

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 71/207 (34%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T            +T+   ++   + +II + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMMTLSQNGSFFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +     N    +  + +  +    + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMG----NGEAPIITMALAISLIVTIISLQTGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     ILP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VL++      +  F+
Sbjct: 233 GQIFKLDLVMTSVLMLSILSALMYIFI 259



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       S   +   T    +    +  +   + A L   S  L  V  P
Sbjct: 57  SQPSRMLKTMMTLSQNGSFFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLQTGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ ++L +  +  L    +
Sbjct: 223 AGLGYLIVYGGQIFKLDLVMTSVLMLSILSALMYIFI 259


>gi|229016056|ref|ZP_04173010.1| ABC transporter, permease [Bacillus cereus AH1273]
 gi|229022278|ref|ZP_04178819.1| ABC transporter, permease [Bacillus cereus AH1272]
 gi|228739017|gb|EEL89472.1| ABC transporter, permease [Bacillus cereus AH1272]
 gi|228745205|gb|EEL95253.1| ABC transporter, permease [Bacillus cereus AH1273]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 83/240 (34%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPALTLSSILLVMWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VAISIVLGVGLAMLMNASTWMERAFYPLLIASQTIPITALAPLFVLWFGYT----IWSKI 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILI 236



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASTWMERAFYPLLIASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + I        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKIVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  L+
Sbjct: 221 PIVLLSLLAIFFVILI 236


>gi|229131677|ref|ZP_04260554.1| ABC transporter, permease [Bacillus cereus BDRD-ST196]
 gi|228651731|gb|EEL07691.1| ABC transporter, permease [Bacillus cereus BDRD-ST196]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAIPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILV 236



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L A +L   ++ +   G +       +     I + + +L       +   T   +L  +
Sbjct: 8   LPALILSGILLALWEVGARIVDEMYILPSPSAIVMKIWALKDILFTVHLPATLYVVLIGV 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++     A L   S  +     P+L   Q+IPI       V++F             
Sbjct: 68  VISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGY--------TIW 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  + Y  L +  ++ EE+  ++  +    F  L +P ++P     +
Sbjct: 120 SKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSAL 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   + 
Sbjct: 180 KIAIPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFV 233

Query: 257 QLL 259
            L+
Sbjct: 234 ILV 236


>gi|288574112|ref|ZP_06392469.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569853|gb|EFC91410.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 225

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  ++ I++  +       +   R+  +++    I+ +IP L      V    ++  G  
Sbjct: 32  VGISVPIAICISLPLGIWISSRPRIARLVIYGSSILMTIPSLALFGIMVALLASIKMGLG 91

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   + A+ AI    +  +T + Y +L  +   + E +    LS  Q  W + +P ++P 
Sbjct: 92  V---VPAVLAISIYSLLPITRNTYTALNGVSPAIIEAATGIGLSRMQVLWKVRIPLALPV 148

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++  G      + ++  G       G+G +I   I   +++ +    L++  +
Sbjct: 149 IMAGVRLAVVMGISVAAFASLVGAG-------GLGGFIFSGIARSNIMMVGAGALSVALL 201

Query: 252 IFLYDQLLFR 261
             L + LL R
Sbjct: 202 GILANWLLLR 211



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 8/187 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + + IA  I +P+GIWI  RP I+  +   + +L   P+   F ++V+ ++   +   
Sbjct: 32  VGISVPIAICISLPLGIWISSRPRIARLVIYGSSILMTIPSLALFGIMVALLASIKMGLG 91

Query: 450 LWLSLLMIFG-TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  ++L I   +   I  N     +       E A+   ++  +    + +P   P  + 
Sbjct: 92  VVPAVLAISIYSLLPITRNTYTALNGVSPAIIEAATGIGLSRMQVLWKVRIPLALPVIMA 151

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A     + +  + +   G       GLG +I     + +   V  G L +    + 
Sbjct: 152 GVRLAVVMGISVAAFASLVGAG-------GLGGFIFSGIARSNIMMVGAGALSVALLGIL 204

Query: 569 LNRFLWH 575
            N  L  
Sbjct: 205 ANWLLLR 211


>gi|217966961|ref|YP_002352467.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
 gi|217336060|gb|ACK41853.1| binding-protein-dependent transport systems inner membrane
           component [Dictyoglomus turgidum DSM 6724]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 76/196 (38%), Gaps = 16/196 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +R    + I+L   F+   +  K++     +  I+DI QS P++ ++T  + +F
Sbjct: 54  HLFITFIRSTLGLFIALFSGFLLGYI--KNKFFYSTIRNIIDIFQSNPLIVWITIALFWF 111

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                          IF +F     N     Y ++ NIP++  E+ + + +S        
Sbjct: 112 G--------FGNKTIIFTVFIVLFPNFYLVTYNAINNIPKEYLELFKIYPISRKNYLIKF 163

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P+  P ++ N+  S          +E +          GIG  ++ A    ++  +  
Sbjct: 164 LIPYLKPFILPNLANSTISSLKITAMAEFLSGES------GIGFLLSYAKAFLNIEEVYA 217

Query: 244 AMLTMLGVIFLYDQLL 259
             + +  +  + + + 
Sbjct: 218 YAVILFILSKILELIF 233



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 70/190 (36%), Gaps = 12/190 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            IT  R  + + IA      +G          S I+    +  + P  V+  + +    +
Sbjct: 56  FITFIRSTLGLFIALFSGFLLGYI--KNKFFYSTIRNIIDIFQSNPLIVWITIALFWFGF 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    ++   +++F   + + +N I   +  P ++ E+   + I+   +    ++P + 
Sbjct: 114 GNKT-IIFTVFIVLFPNFYLVTYNAI---NNIPKEYLELFKIYPISRKNYLIKFLIPYLK 169

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ +     +   +   + ++E  S        +G+G  ++ +    +  EV    +I+ 
Sbjct: 170 PFILPNLANSTISSLKITAMAEFLSGE------SGIGFLLSYAKAFLNIEEVYAYAVILF 223

Query: 564 CFVLALNRFL 573
                L    
Sbjct: 224 ILSKILELIF 233


>gi|192290645|ref|YP_001991250.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284394|gb|ACF00775.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 264

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 19/201 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   ++  +I S   + VG W   +P +++   P+ +++ A P  V  P+    +   
Sbjct: 65  ITLQESLLAFVIGSFAGVLVGFWFARQPRVAAVFDPYVKMVNALPRVVLAPIFTLWLGLG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L+ F   + +      G         + A    ++  +  R++  P    
Sbjct: 125 IWSKVALGVTLVFFVVFFNVY----QGVKETSATLVDNARMLGMSERQMMRHVFWPSALS 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +   TA G A   ++V E            GLG  I ++        V  G+ ++  
Sbjct: 181 WMFSSLHTAIGFAVVGAVVGEYLG------AAAGLGYLIQQAEGTFDVAGVFAGMFVLSV 234

Query: 565 FVLALN---------RFLWHP 576
           FV+ ++           +W P
Sbjct: 235 FVILIDLAVSLVERRLLVWRP 255



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 93/257 (36%), Gaps = 23/257 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASRTTLRM 72
            F  +  + V  ++  +    +    P       D+   V        + ++   T    
Sbjct: 11  FFVAIVALTVWQVLTTVPIAGRLLLPPFFFSTPVDVAKQVIAWFASGVIWKHLWITLQES 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A VI      +     A+  R+  V  P + ++ ++P +       ++          
Sbjct: 71  LLAFVIGSFAGVLVGFWFARQPRVAAVFDPYVKMVNALPRVVLAPIFTLWLGLGI----- 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               + +    T   + + F++YQ +      L + +R   +S  Q   ++  P ++  +
Sbjct: 126 ---WSKVALGVTLVFFVVFFNVYQGVKETSATLVDNARMLGMSERQMMRHVFWPSALSWM 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++  ++    F VV +   VVG+ +    G+G  I  A    D+  +   M  +   +
Sbjct: 183 FSSLHTAIG---FAVVGA---VVGEYLGAAAGLGYLIQQAEGTFDVAGVFAGMFVLSVFV 236

Query: 253 FLYDQ---LLFRPMIVW 266
            L D    L+ R ++VW
Sbjct: 237 ILIDLAVSLVERRLLVW 253


>gi|75674531|ref|YP_316952.1| binding-protein dependent transport system inner membrane protein
           [Nitrobacter winogradskyi Nb-255]
 gi|74419401|gb|ABA03600.1| Binding-protein-dependent transport systems inner membrane
           component [Nitrobacter winogradskyi Nb-255]
          Length = 278

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 7/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              +++     V  +  + W  +V    I         +V     QD   +      T+ 
Sbjct: 21  RPAVRVLLPLAVLGVGVLAWDALVRFKDIPPYVLPGPGLVAATLVQDWPILWRSLLTTLL 80

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   I A+I  + + +       +   + P+A +L   P     PL++      +L  
Sbjct: 81  TTMEGFIAAAIGGVALALLFNQSKWLEQALLPYAIILQVTPVIAIAPLLLI-----YLPQ 135

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              + +       + +L N   G ++   +   +   +  +  +  RY+ LP   PY + 
Sbjct: 136 QTAVVVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASRMQTLRYLKLPAALPYILG 195

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G +   ++V+E+A+          L   IAES  + + P +   +L++    + 
Sbjct: 196 GLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALLLLSVAGIV 253

Query: 569 L 569
           +
Sbjct: 254 I 254



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 11/199 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L +    T L  +   + + +     A L  +S+ L   L+P   I+Q  P++   
Sbjct: 67  DWPILWRSLLTTLLTTMEGFIAAAIGGVALALLFNQSKWLEQALLPYAIILQVTPVIAIA 126

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++Y         +  + A +   +    + +  +    L ++ R+L  + R +  S 
Sbjct: 127 PLLLIY---------LPQQTAVVVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASR 177

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q   YL +P ++P ++  + ++        V +E+            +   IA +    
Sbjct: 178 MQTLRYLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRL 235

Query: 237 DLLAILYAMLTMLGVIFLY 255
           ++  +  A+L +     + 
Sbjct: 236 NIPRMFAALLLLSVAGIVI 254


>gi|257887876|ref|ZP_05667529.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
 gi|257823930|gb|EEV50862.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
          Length = 213

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 67/167 (40%), Gaps = 15/167 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L  +  +   +++ +   +Q+IP L  L   +  F           +L AI A+F
Sbjct: 35  VPLGVLLTRFPKAATIVIGLTSALQTIPSLALLALMIPLFGVG--------KLPAIIALF 86

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  + N+  +  +V++   ++ +Q  + + +P +MP ++  + ++    
Sbjct: 87  IYSLLPILRNTYIGMKNVDWNYRDVAKGMGMTEFQSIFSVELPIAMPTIMAGIRLAA--- 143

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +V+A   +    + I   G+G  I   +       IL   + +  
Sbjct: 144 -VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPDLILAGTIPVTI 186



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F +Q    ++  G   ++   + +II  II +P+G+ +   P  ++ +      L  
Sbjct: 1   MQQFFHQYGSEILSKGFEHLYISGLALIIGIIIAVPLGVLLTRFPKAATIVIGLTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++           L   + +   +   IL N   G      ++++VA    
Sbjct: 61  IPSLALLALMIPLFGVG----KLPAIIALFIYSLLPILRNTYIGMKNVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +T ++    + LP   P  + G   A     AW              ++   GLG  I  
Sbjct: 117 MTEFQSIFSVELPIAMPTIMAGIRLAAVYVIAWATL---------ASYIGAGGLGDLIFS 167

Query: 546 STEKGSFPEVVLGVL 560
                    ++ G +
Sbjct: 168 GLNNYQPDLILAGTI 182


>gi|261367285|ref|ZP_05980168.1| putative ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282570888|gb|EFB76423.1| putative ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 253

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 91/243 (37%), Gaps = 18/243 (7%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387
           + S  R   +  + W  V    A+ +    +       T + +  ++           + 
Sbjct: 1   MASKYRECLIAIVAWVIVWQIAAVTLGHGGLFLATPLQTLRALGLLLPTSAFWHRIAFSA 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            R+V   ++A +  + +G        +   + P  QL+ A P   F  L +  VS  +L 
Sbjct: 61  LRIVAGFVLAVVGGLVLGAAGARWHAVRVFVDPVMQLIRAMPVASFVILALLWVSGSNL- 119

Query: 448 PNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                S+++ F     +++  V+AG +       E+A  + +      RYI LPGIFP +
Sbjct: 120 -----SVIVSFTHVLPVVYAGVLAGIADTDPQLLEMARVYRLPWMARLRYIWLPGIFPSF 174

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
               I A G  W + + +EV       +     G  +  +    S P+V    L++    
Sbjct: 175 SESCIAAMGMCWKSGVSAEVIGLPDHSV-----GDALYRAKITLSTPDVFAWTLVIVLLS 229

Query: 567 LAL 569
             L
Sbjct: 230 ALL 232



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 22  LLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           ++A+V+V  I  + L HG      P   +  + + L   +     + + LR+++  V+++
Sbjct: 12  IVAWVIVWQIAAVTLGHGGLFLATPLQTLRALGLLLPTSAFWHRIAFSALRIVAGFVLAV 71

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   V     A+   + + + P++ +++++P+  F+   +++               ++ 
Sbjct: 72  VGGLVLGAAGARWHAVRVFVDPVMQLIRAMPVASFVILALLWVSGSN---------LSVI 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             FT  +  +   +   + +    L E++R +RL    +  Y+ +P   P    + + +M
Sbjct: 123 VSFTHVLPVVYAGVLAGIADTDPQLLEMARVYRLPWMARLRYIWLPGIFPSFSESCIAAM 182

Query: 201 SGGWFFVVASEMIVVGDTVIP 221
              W   V++E+I + D  + 
Sbjct: 183 GMCWKSGVSAEVIGLPDHSVG 203


>gi|68248959|ref|YP_248071.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae 86-028NP]
 gi|145628710|ref|ZP_01784510.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.1-21]
 gi|145640305|ref|ZP_01795889.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae R3021]
 gi|148825362|ref|YP_001290115.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae PittEE]
 gi|260582552|ref|ZP_05850342.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127]
 gi|319775776|ref|YP_004138264.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease [Haemophilus influenzae F3047]
 gi|319896686|ref|YP_004134879.1| abc-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Haemophilus influenzae F3031]
 gi|329123618|ref|ZP_08252178.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
 gi|68057158|gb|AAX87411.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 86-028NP]
 gi|144979180|gb|EDJ88866.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.1-21]
 gi|145274891|gb|EDK14753.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 22.4-21]
 gi|148715522|gb|ABQ97732.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittEE]
 gi|260094363|gb|EEW78261.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127]
 gi|317432188|emb|CBY80540.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae F3031]
 gi|317450367|emb|CBY86583.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae F3047]
 gi|327469817|gb|EGF15282.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 245

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVGQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|1074368|pir||F64149 nitrate transport protein nrtB homolog HI0355 - Haemophilus
           influenzae (strain Rd KW20)
          Length = 260

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 19  RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVRQQLFTHAELLWQHTQVTLLEIC 77

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 78  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 137

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 138 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 189

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 190 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 243

Query: 254 LY 255
             
Sbjct: 244 CL 245



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 92  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 147

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 148 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 207

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 208 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 258


>gi|327467656|gb|EGF13153.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK330]
          Length = 281

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 50  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 109

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 110 ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 165

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 166 PIIISILDGFRHCDWDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 225

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 226 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 270



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 94/242 (38%), Gaps = 16/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 40  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 98

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 99  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +   D   +    + + WQ  W+  +P S+P   
Sbjct: 153 --LPKIVLIILTTTFPIIISILDGFRHCDWDTLTLFELMQANRWQILWHFKIPASLPYFY 210

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 211 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIILVSVIS 263

Query: 254 LY 255
           L 
Sbjct: 264 LL 265


>gi|313905397|ref|ZP_07838762.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313469720|gb|EFR65057.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 308

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 79/198 (39%), Gaps = 10/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  V+     T+ R ++   I + +   + I +     +   + P+  L+   P     P
Sbjct: 64  LGVVLTGAQATLLRALLGFSIGTALGFFLAILMMLSGLVEKMLFPYLMLIQLIPVLGLAP 123

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++S     +++  +  ++L    + + +  N +AG  +   D  ++  ++       + 
Sbjct: 124 IILSITGDINVSRVVIAAIL----SFYPVATNTLAGLKSVGKDKYDLMFTYAARKSVIYG 179

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++P   PY  TG   A   A  ASI+ +            GLG  +++S +      V
Sbjct: 180 KVLIPSSVPYLFTGMKIAAPMAITASILVDTLQGDG------GLGCLLSQSLKHAMSIYV 233

Query: 556 VLGVLIMCCFVLALNRFL 573
              ++ +  F+   + +L
Sbjct: 234 FWLIVFVSAFIGIFSGYL 251



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T LR L    I     F  A L   S  +  +L P L ++Q IP+LG     +    
Sbjct: 71  AQATLLRALLGFSIGTALGFFLAILMMLSGLVEKMLFPYLMLIQLIPVLGLAPIILSITG 130

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++   +V+ A + + + + T        +    L ++ +D  ++  ++       +  + 
Sbjct: 131 DINVSRVVIAAILSFYPVAT--------NTLAGLKSVGKDKYDLMFTYAARKSVIYGKVL 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P L   M ++       + AS ++   DT+    G+G  ++ ++K    + + + 
Sbjct: 183 IPSSVPYLFTGMKIA---APMAITASILV---DTLQGDGGLGCLLSQSLKHAMSIYVFWL 236

Query: 245 MLTMLGVIFLYDQLLFRPMIVW 266
           ++ +   I ++   L   +  W
Sbjct: 237 IVFVSAFIGIFSGYLIGLVEKW 258


>gi|288961254|ref|YP_003451593.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
 gi|288913562|dbj|BAI75049.1| binding-protein-dependent transport systems inner membrane
           component [Azospirillum sp. B510]
          Length = 274

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + +A+   + +GI +G  P++   + PF  +L+  P     P++      
Sbjct: 77  LASLHRLGLGLGVATAAALVIGIAMGLIPYVRVGLSPFVAILSMVPPMAVLPVLFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G   +++ ++       P +    A +   + W+    ++LP + 
Sbjct: 137 DELSK----VVLIVVGVAPFLIRDLAMRTGELPAEQIIKAQTLGGSTWQIVLRVVLPQML 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V     + G AW   I +E  +       T GLG  I       +   ++  V  + 
Sbjct: 193 PRLVDAVRLSLGPAWLFLISAEAIA------ATEGLGYRIFLVRRYLAMDVILPYVAWIT 246

Query: 564 CFVLALNRFL 573
                 +  L
Sbjct: 247 LLAFVSDYLL 256



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +  R+   + ++     V          + + L P + I+  +P +  L    
Sbjct: 72  MWADTLASLHRLGLGLGVATAAALVIGIAMGLIPYVRVGLSPFVAILSMVPPMAVLPVLF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   +      +P +    +++   S WQ  
Sbjct: 132 IVFGLD--------ELSKVVLIVVGVAPFLIRDLAMRTGELPAEQIIKAQTLGGSTWQIV 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P LV  + +S+   W F++++E I          G+G  I L  +   +  
Sbjct: 184 LRVVLPQMLPRLVDAVRLSLGPAWLFLISAEAIA------ATEGLGYRIFLVRRYLAMDV 237

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  +  +  + F+ D LL
Sbjct: 238 ILPYVAWITLLAFVSDYLL 256


>gi|166710706|ref|ZP_02241913.1| permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 284

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 10/222 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +        +     + +L  FV   LAA +R    VL 
Sbjct: 71  LPSALQTARAFYDGLLSGELLRRIGAWLQVLAQGYALGVLLAFVLTALAASTRWGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  + Y     +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTYAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PETLRMAGRNYGLRGPRYVAQLLIPAALPTILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             G+G YI     E     +      ++ +   +    FR +
Sbjct: 241 KGGLGWYIFQNRNELYTDKVFAGRAMVIVLGGWWKAWCFRRL 282



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 79/264 (29%), Gaps = 9/264 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L        +  P           +  + +I    +   + +  A Q+     +    
Sbjct: 28  PALVAAAAPTPWQAPPWLRNALVLVVLVAVWEIAARVIGDDLMLPSALQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L  I      +  +     +  ++   +             +     +    PA   
Sbjct: 88  GELLRRIG---AWLQVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P   +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTYAGFQAVPETLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++G       AW   I +E+           GLG YI ++  +    
Sbjct: 201 VAQLLIPAALPTILSGLKIGWAFAWRTLIAAELVFGA--TSGKGGLGWYIFQNRNELYTD 258

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
           +V  G  ++         + +  L
Sbjct: 259 KVFAGRAMVIVLGGWWKAWCFRRL 282


>gi|121609861|ref|YP_997668.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121554501|gb|ABM58650.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 220

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 10/180 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +  A+ I++           +S+ L  +++ +  +M ++P +      +    
Sbjct: 18  TIEHVAIVAVAIGIAIATAVPIGIAITRSKGLADMVLRLASMMVTVPSIALFGLMMPLLS 77

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +  G  IG   A I  I  SQ+  +  + Y ++ NI   L E S+   +S WQ+   + 
Sbjct: 78  PMGHG--IGYVPAVIAVILYSQL-PIIRNTYTAIANIDPGLREASQGMGMSSWQRLRQVE 134

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +  +       VV +  +    T I   G+G++IA  I +     ++  
Sbjct: 135 IPLALPVIMAGVRTA-------VVMNIGVTAIATYIGAGGLGTFIARGISQSHPQQLIVG 187



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 8/173 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYH 445
           +  V V I IA    +P+GI I     ++  +   A ++   P+   F L++  +S   H
Sbjct: 22  VAIVAVAIGIAIATAVPIGIAITRSKGLADMVLRLASMMVTVPSIALFGLMMPLLSPMGH 81

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   + +I  +Q  I+ N     +      +E +    ++ W+  R + +P   P 
Sbjct: 82  GIGYVPAVIAVILYSQLPIIRNTYTAIANIDPGLREASQGMGMSSWQRLRQVEIPLALPV 141

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            + G  TA       + ++     G       GLG +IA    +    ++++G
Sbjct: 142 IMAGVRTAVVMNIGVTAIATYIGAG-------GLGTFIARGISQSHPQQLIVG 187


>gi|91976661|ref|YP_569320.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91683117|gb|ABE39419.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 272

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + I++ + +  GI +G  P  ++ +  F  + +  P     P++   +  
Sbjct: 76  FASLVRLLSALAISTSLALLFGIVVGLLPAANAMLGAFVSVTSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      L++ GT   ++ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GEN----AKIALIVIGTLPCMIRDLAMKVLELPREQLIKAQTLGASTWQIALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +        +GLG  I       +   ++  V  + 
Sbjct: 192 PRLIDSLRLQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVIIPYVAWIT 245

Query: 564 CFVLALN---RFLWHPLYLY 580
               A++   R +    + +
Sbjct: 246 LLAFAMDFALRLIQRKAFPW 265



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPF-ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N+ P   ++  +    F L+A   V+G    L     +  +P        V  +  
Sbjct: 1   MRLINLRPGRQLAFYMAALPFVLVAIAYVLGSEARLAENPNDKLLPALSSMAQAVKQMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
            +D  +    +      + +R+LSA+ IS     ++  +         +L   + +   +
Sbjct: 61  QVDARTGSYLMWSDTFASLVRLLSALAISTSLALLFGIVVGLLPAANAMLGAFVSVTSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    +             E A I  I    +  M   +   +  +PR+    ++
Sbjct: 121 PPLALLPILFIVMGLG--------ENAKIALIVIGTLPCMIRDLAMKVLELPREQLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S WQ    + +P  +P L+ ++ + +   W F++A+E I          G+G  I 
Sbjct: 173 TLGASTWQIALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDS------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  I+  +  +  + F  D  L
Sbjct: 227 LVRRYLAMDVIIPYVAWITLLAFAMDFAL 255


>gi|225075828|ref|ZP_03719027.1| hypothetical protein NEIFLAOT_00844 [Neisseria flavescens
           NRL30031/H210]
 gi|224952861|gb|EEG34070.1| hypothetical protein NEIFLAOT_00844 [Neisseria flavescens
           NRL30031/H210]
          Length = 265

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  + VG+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALVAGLAVGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSVGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 89/196 (45%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + ++L+       +A   +    +L P++ ++ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGISVALVAGLAVGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ 
Sbjct: 187 LTGYVISSVGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
           ++  + L++ L+ +P+
Sbjct: 241 VIVFVSLFEYLITKPL 256


>gi|225016356|ref|ZP_03705548.1| hypothetical protein CLOSTMETH_00259 [Clostridium methylpentosum
           DSM 5476]
 gi|224950899|gb|EEG32108.1| hypothetical protein CLOSTMETH_00259 [Clostridium methylpentosum
           DSM 5476]
          Length = 270

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 84/238 (35%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ FV +  I+  +             +      L  + L ++   T    L    + ++
Sbjct: 32  LVVFVALWEILADIGIIDSFIMSSPSRILRTFTNLSSNGLLEHLGVTLYETLVGFGLGVV 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + ATL   S     V  P L ++ S+P +      +++              A IF 
Sbjct: 92  IGLILATLLWWSDFFSKVSEPFLVVLNSLPKIALGPVIIIWVGAGTG--------AIIFM 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +      M     N    L  ++++F  +  Q F  +  P ++  L  ++ +++ 
Sbjct: 144 AVAISLIVTVLEMLNGFRNTNPQLVRMAQTFSANKRQIFTQIVFPSNLHTLFNSLKVNIG 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V+A E +V         G+G  I    +   L  ++ +++ +  V  +  +++
Sbjct: 204 LSLVGVIAGEFLV------SKAGLGYLIVYGGQVFKLDLVMASVIILAVVAAVLYEVV 255



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 83/265 (31%), Gaps = 17/265 (6%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R   + R       +++     +   + ++      G+       S   I+  FT     
Sbjct: 10  RRSYLKRKKHRRTAIRVTQLSILVVFVALWEILADIGIIDSFIMSSPSRILRTFTNLSSN 69

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    +T++  +V   +  +I + +   + +    S   +PF  +L + P     P++
Sbjct: 70  GLLEHLGVTLYETLVGFGLGVVIGLILATLLWWSDFFSKVSEPFLVVLNSLPKIALGPVI 129

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  V          +  + +  +    +  ++ G          +A +F     + +  I
Sbjct: 130 IIWVGAGTG----AIIFMAVAISLIVTVLEMLNGFRNTNPQLVRMAQTFSANKRQIFTQI 185

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           + P              G +    I  E        +   GLG  I    +      V+ 
Sbjct: 186 VFPSNLHTLFNSLKVNIGLSLVGVIAGEFL------VSKAGLGYLIVYGGQVFKLDLVMA 239

Query: 558 GVLIMCC-------FVLALNRFLWH 575
            V+I+          V+ L R +  
Sbjct: 240 SVIILAVVAAVLYEVVVILERLVTR 264


>gi|160878960|ref|YP_001557928.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
 gi|160427626|gb|ABX41189.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium phytofermentans ISDg]
          Length = 274

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 97/265 (36%), Gaps = 22/265 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIW 381
           + + +  +  R++  +    F ++  ++  + W +     +         T      V +
Sbjct: 22  KRYQKRVTKIRIAQWIIFLSFLILWELSTRVGWLNSFIFSSPSRVVKCFATMAKDGTVFY 81

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              IT+F   +   +   I + V + + +   ++  ++P+  +L + P +   P+ +  +
Sbjct: 82  HIGITLFETFISFGLVIGIGLLVAVLLWWNESVAKVLEPYLVVLNSLPKSALAPVFIVWL 141

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   +    + +FGT   +  N     ++   D  ++  +   T       ++LPG
Sbjct: 142 GNNMKTIIVAAVTVAVFGTIITLYTNF----NSTEQDKYKLIYTLGGTKKDVLFKVVLPG 197

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  ++      G +    I+ E  +         GLG  I   ++      V++ ++I
Sbjct: 198 NLPSIISCMKVNIGLSLVGVIIGEFLA------AKAGLGYLIVYGSQVFKLDWVIMSIVI 251

Query: 562 MCCFVLALNRFLWHPLYLYGTRCLR 586
           +C    AL   L      Y  R +R
Sbjct: 252 LCIIATALYGIL-----SYIERRVR 271



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 85/239 (35%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+F+++  +   +        + P  +V          ++  +   T      +  + +
Sbjct: 39  FLSFLILWELSTRVGWLNSFIFSSPSRVVKCFATMAKDGTVFYHIGITLFETFISFGLVI 98

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               + A L   +  +  VL P L ++ S+P        +V+  N             I 
Sbjct: 99  GIGLLVAVLLWWNESVAKVLEPYLVVLNSLPKSALAPVFIVWLGNNM--------KTIIV 150

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A  T  V+    ++Y +  +  +D  ++  +   +     + + +P ++P ++  M +++
Sbjct: 151 AAVTVAVFGTIITLYTNFNSTEQDKYKLIYTLGGTKKDVLFKVVLPGNLPSIISCMKVNI 210

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V+  E +          G+G  I    +   L  ++ +++ +  +      +L
Sbjct: 211 GLSLVGVIIGEFLAAKA------GLGYLIVYGSQVFKLDWVIMSIVILCIIATALYGIL 263


>gi|326559913|gb|EGE10313.1| ABC transporter permease protein [Moraxella catarrhalis 7169]
 gi|326561226|gb|EGE11590.1| ABC transporter permease protein [Moraxella catarrhalis 103P14B1]
 gi|326570082|gb|EGE20127.1| ABC transporter permease protein [Moraxella catarrhalis BC8]
 gi|326573596|gb|EGE23556.1| ABC transporter permease protein [Moraxella catarrhalis 101P30B1]
 gi|326576035|gb|EGE25958.1| ABC transporter permease protein [Moraxella catarrhalis CO72]
 gi|326576103|gb|EGE26020.1| ABC transporter permease protein [Moraxella catarrhalis O35E]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 14/240 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + L+  +LVI    + +  + +  +P     +  +  D   L  +A  T        VI 
Sbjct: 11  YSLVLIILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIG 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L  +FV + L   SR     + P++ + Q+IP +      V++             L  +
Sbjct: 71  LALSFVLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGI--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S  + MT ++     ++  D   +  S + + +Q + +L +P +M      + ++
Sbjct: 123 VLVVLSVFFPMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +S      V +E +          G+G Y+    K  +L  +   +  +  +      L+
Sbjct: 183 LSYALISAVVAEWLGG------YYGLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  VV    +        + + H    D   +      T+    +  +I   +  
Sbjct: 16  IILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIGLALSF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +    +    + P   L    P     PL+V  + Y  L   + + L + F    
Sbjct: 76  VLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGILPKVVLVVLSVFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  S     ++ +R++ +P    Y+ TG   A   A  +++
Sbjct: 132 PMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVALSYALISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E     +      GLG Y+    +      +   + ++    LAL   +
Sbjct: 192 VAEWLGGYY------GLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236


>gi|170723468|ref|YP_001751156.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169761471|gb|ACA74787.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 237

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL +  V+ I+ +L+H           + I  I      L  Y     + +L++M  +L
Sbjct: 8   GLLGWAAVLVILALLVH----------WIGIDTIARYRDDLGFYLQAHLVLVLASMAAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                     ++  R+      +   ++  +IP L  L   +                 A
Sbjct: 58  AVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRV 169

Query: 199 SMSG 202
           +++ 
Sbjct: 170 ALAL 173



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 11/171 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  V+  +A+ + W  I  I     Y+D L       + +  V+  +  A  + IP GI 
Sbjct: 12  WAAVLVILALLVHWIGIDTIAR---YRDDLGFYLQAHLVL--VLASMAAALAVGIPAGIA 66

Query: 408 IGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +     +        F  +    P      + +S +              +   +   I+
Sbjct: 67  LSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG----PAIFALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            N   G    P   KE A+   +T  +    + LP   P  V G   A   
Sbjct: 123 RNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALAL 173


>gi|326570823|gb|EGE20847.1| ABC transporter permease protein [Moraxella catarrhalis BC7]
          Length = 250

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 14/240 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + L+  +LVI    + +  + +  +P     +  +  D   L  +A  T        VI 
Sbjct: 11  YSLVLIILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIG 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L  +FV + L   SR     + P++ + Q+IP +      V++             L  +
Sbjct: 71  LALSFVLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGI--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S  + MT ++     ++  D   +  S + + +Q + +L +P +M      + ++
Sbjct: 123 VLVVLSVFFPMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +S      V +E +          G+G Y+    K  +L  +   +  +  +      L+
Sbjct: 183 LSYALISAVVAEWLGG------YYGLGVYMTRVRKSYELDNMFAVIFLISFLALALIALV 236



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  VV    +        + + H    D   +      T+    +  +I   +  
Sbjct: 16  IILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTVIGLALSF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +    +    + P   L    P     PL+V  + Y  L   + + L + F    
Sbjct: 76  VLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGILPKVVLVVLSVFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  S     ++ +R++ +P    Y+ TG   A   A  +++
Sbjct: 132 PMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVALSYALISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E     +      GLG Y+    +      +   + ++    LAL   +
Sbjct: 192 VAEWLGGYY------GLGVYMTRVRKSYELDNMFAVIFLISFLALALIALV 236


>gi|257866739|ref|ZP_05646392.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257872744|ref|ZP_05652397.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257876331|ref|ZP_05655984.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC20]
 gi|325567164|ref|ZP_08143831.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|257800697|gb|EEV29725.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257806908|gb|EEV35730.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257810497|gb|EEV39317.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           casseliflavus EC20]
 gi|325158597|gb|EGC70743.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 211

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   +        +A+++ +L       +  +  +   +++ I   +Q++P L  L  
Sbjct: 10  GQLVTKSLEHLYISFAALLLGILVAVPIGVILTRFPKAATIVIGITSALQTVPSLALLAL 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ AI A+F   +  +  + Y  +  +  +  +V++   ++  Q
Sbjct: 70  MIPILGVG--------KVPAIVALFIYSLLPILRNTYIGMKKVDWNYRDVAKGMGMTNLQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  I  G       G+G  I   +     
Sbjct: 122 SIISVELPLAIPTIMAGIRLSAVYVLAWATLASYIGAG-------GLGDLIFSGLNNYQP 174

Query: 239 LAILYAMLTMLG 250
             I    + +  
Sbjct: 175 PLIFAGTIPVTI 186



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 67/198 (33%), Gaps = 11/198 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F  +    ++      ++     +++  ++ +P+G+ +   P  ++ +      L  
Sbjct: 1   MQSFFNEYGGQLVTKSLEHLYISFAALLLGILVAVPIGVILTRFPKAATIVIGITSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++  +        +   + +   +   IL N   G      ++++VA    
Sbjct: 61  VPSLALLALMIPILGVG----KVPAIVALFIYSLLPILRNTYIGMKKVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T  +    + LP   P  + G   +       + ++     G       GLG  I    
Sbjct: 117 MTNLQSIISVELPLAIPTIMAGIRLSAVYVLAWATLASYIGAG-------GLGDLIFSGL 169

Query: 548 EKGSFPEVVLGVLIMCCF 565
                P +  G + +  F
Sbjct: 170 NNYQPPLIFAGTIPVTIF 187


>gi|163938649|ref|YP_001643533.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
 gi|163860846|gb|ABY41905.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
          Length = 251

 Score = 77.7 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 59  ATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 119 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 175 YFFSALKIAIPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 228

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 229 LAIFFVILV 237



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L A +L   ++ +   G +       +     I + + +L       +   T   +L  +
Sbjct: 9   LPALILSGILLALWEVGARIVDEMYILPSPSAIVMKIWALKDILFTVHLPATLYVVLIGV 68

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++     A L   S  +     P+L   Q+IPI       V++F             
Sbjct: 69  VISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGY--------TIW 120

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  + Y  L +  ++ EE+  ++  +    F  L +P ++P     +
Sbjct: 121 SKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSAL 180

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   + 
Sbjct: 181 KIAIPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFV 234

Query: 257 QLL 259
            L+
Sbjct: 235 ILV 237


>gi|326562632|gb|EGE12936.1| ABC transporter permease protein [Moraxella catarrhalis 46P47B1]
 gi|326569604|gb|EGE19656.1| ABC transporter permease protein [Moraxella catarrhalis BC1]
          Length = 250

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 91/240 (37%), Gaps = 14/240 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + L+  +LVI    + +  + +  +P     +  +  D   L  +A  T        +I 
Sbjct: 11  YSLVLIILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTIIG 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L  +FV + L   SR     + P++ + Q+IP +      V++             L  +
Sbjct: 71  LALSFVLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGI--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S  + MT ++     ++  D   +  S + + +Q + +L +P +M      + ++
Sbjct: 123 VLVVLSVFFPMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +S      V +E +          G+G Y+    K  +L  +   +  +  +      L+
Sbjct: 183 LSYALISAVVAEWLGG------YYGLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  VV    +        + + H    D   +      T+    +  II   +  
Sbjct: 16  IILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTIIGLALSF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +    +    + P   L    P     PL+V  + Y  L   + + L + F    
Sbjct: 76  VLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGILPKVVLVVLSVFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  S     ++ +R++ +P    Y+ TG   A   A  +++
Sbjct: 132 PMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVALSYALISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V+E     +      GLG Y+    +      +   + ++    LAL   +
Sbjct: 192 VAEWLGGYY------GLGVYMTRVRKSYELDNMFAVIFLISFLTLALIALV 236


>gi|225024938|ref|ZP_03714130.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC
           23834]
 gi|224942269|gb|EEG23478.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC
           23834]
          Length = 505

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 8/149 (5%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
              +      L Q           A++ ++      A L A+ +R    ++   +I+Q+I
Sbjct: 2   PTSLPFSPAELWQMLLTHLWLSGLALLAAVAIAVPAAVLFARRQRAAEAVLQFTNILQTI 61

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L   + +     P  +I   L A+  IF         + Y  L  I + +++   
Sbjct: 62  PSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLTQIDQSIQDAYT 113

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +F LS WQ  W + +P ++P ++  +  +
Sbjct: 114 AFGLSRWQSLWRIELPMALPAMISGIRTA 142



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 4/122 (3%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               R   +  +  F  +L   P+     L++  V        + L+L  +      I  
Sbjct: 40  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQ 95

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      ++  ++F ++ W+    I LP   P  ++G  TA       + ++ +
Sbjct: 96  NTYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTAAVLIVGTATLAAL 155

Query: 527 AS 528
             
Sbjct: 156 IG 157


>gi|170736372|ref|YP_001777632.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169818560|gb|ACA93142.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 272

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 18/249 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AF  +  + +       +  VP + +   +   LD   L    S T  R++    I   
Sbjct: 34  VAFAALWWLASAQRWFPPQLVVPPERLAATLRTLLDTGELRDNLSITLHRLVLGFAIGAT 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L A+SR     L P  D+++ +P L  +   ++      P K++    A  F 
Sbjct: 94  SGAAFGILLARSRLFADYLRPTFDLLRQLPTLTLIPLLILLIGVDEPLKLVVVGKAVFF- 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + Y  + + PRDL E++R + L  +     + +P ++P L+  + ++++
Sbjct: 153 -------PVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDVLLPAALPPLLTGVRIALA 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  +VA E++          GIG  + LA +   L  +L  +  +  + F  D+   L
Sbjct: 206 RAWLALVAVELLSADS------GIGQMMELARQMLRLDVVLVDVAVIGLIGFALDRSIAL 259

Query: 259 LFRPMIVWS 267
           + R  + W 
Sbjct: 260 VQRYALRWQ 268



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 87/265 (32%), Gaps = 24/265 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLD--IFWFCVVCGVAIGIAWQSIGYIVNHF------- 371
              R   P           V+ + D  ++W   V   A+     +  +            
Sbjct: 1   MATRALAPNGLRAAVRLPGVARLGDHALWWITPVAFAALWWLASAQRWFPPQLVVPPERL 60

Query: 372 -----TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                T  D   +     IT+ R+V+   I +      GI +      +  ++P   LL 
Sbjct: 61  AATLRTLLDTGELRDNLSITLHRLVLGFAIGATSGAAFGILLARSRLFADYLRPTFDLLR 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P       ++  +            +++     + +      G    P D  E+A  +
Sbjct: 121 QLPTLT----LIPLLILLIGVDEPLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMARHY 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +  +   R ++LP   P  +TG   A   AW A +  E+ S        +G+G  +  +
Sbjct: 177 GLGRFALLRDVLLPAALPPLLTGVRIALARAWLALVAVELLS------ADSGIGQMMELA 230

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNR 571
            +      V++ V ++     AL+R
Sbjct: 231 RQMLRLDVVLVDVAVIGLIGFALDR 255


>gi|332971624|gb|EGK10574.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Kingella kingae ATCC 23330]
          Length = 265

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 80/193 (41%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R  V I I+ ++ + +G+  G      +  +PF  +L A P  ++  + +    + 
Sbjct: 74  ISLWRAAVGIGISLVLGVVLGLIAGCFKTAMALFKPFITILLAMPPIIWVVMALFWFGFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + +    + +L+   T      +   G  +     +E+  ++ +   +  RY+ LP +  
Sbjct: 134 NASVLFTIIILVSPLTF----ASAAMGMMSVNAQHEELFDAYQLGWLKKIRYLYLPHLTG 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++    A        +++E+         + G+GA IA++        V+  V+++  
Sbjct: 190 YVISSLNIAVAMGVKVVVMAELLG------ASEGIGARIADARAMLDTETVMAYVVLVIA 243

Query: 565 FVLALNRFLWHPL 577
            V      +  PL
Sbjct: 244 LVSLFEYLITKPL 256



 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 98/247 (39%), Gaps = 18/247 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAM 76
              +  + + +I +   G               + L    L ++       +  R    +
Sbjct: 24  GFASLGIAMLLIALWAWGSVVFGEFMLPSPTTVLRLSWQLLNEFKLNQLDISLWRAAVGI 83

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ISL+   V   +A   +    +  P + I+ ++P + ++   + +F             
Sbjct: 84  GISLVLGVVLGLIAGCFKTAMALFKPFITILLAMPPIIWVVMALFWFG--------FGNA 135

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +F I          S    + ++    EE+  +++L   +K  YL +P     ++ ++
Sbjct: 136 SVLFTIIILVSPLTFASAAMGMMSVNAQHEELFDAYQLGWLKKIRYLYLPHLTGYVISSL 195

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++++ G   VV +E++   +      GIG+ IA A    D   ++  ++ ++ ++ L++
Sbjct: 196 NIAVAMGVKVVVMAELLGASE------GIGARIADARAMLDTETVMAYVVLVIALVSLFE 249

Query: 257 QLLFRPM 263
            L+ +P+
Sbjct: 250 YLITKPL 256


>gi|143563|gb|AAA22773.1| product and function unknown; putative [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
          Length = 203

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 19/205 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       L A  RRL   +  + +++Q+IP L  L   ++    
Sbjct: 3   GRHFLMSVYGVLFAAVVGVPVGILIAHYRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGL 62

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +
Sbjct: 63  G--------ANTVIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVEL 114

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 115 PLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAG 167

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270
            T   V+ +   L+    + W  +F
Sbjct: 168 ATPTAVMAIGADLI----MAWIERF 188



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ A+++ +PVGI I     +S+ +     ++   PA     +++  +         
Sbjct: 10  VYGVLFAAVVGVPVGILIAHYRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 66

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 67  -VIISLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 125

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   +   +   ++L 
Sbjct: 126 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILA 166


>gi|16126870|ref|NP_421434.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221235654|ref|YP_002518091.1| taurine transport system permease protein TauC [Caulobacter
           crescentus NA1000]
 gi|13424212|gb|AAK24602.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220964827|gb|ACL96183.1| taurine transport system permease protein tauC [Caulobacter
           crescentus NA1000]
          Length = 252

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 5/237 (2%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++ +   +   L   W      +A+          +          ++     T+   ++
Sbjct: 3   RILAPLILIAALLAGWELACKALAVPAYLLPPPSAIWEAFVASWPLLLGSAWATLSTALL 62

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +IIAS+I   + + +     +   ++P A  L   P     PLV       H  P   +
Sbjct: 63  ALIIASLIACGLALLVSLNGFLEDAVRPIAVTLQVTPLVAIAPLVTIWAGIDH--PERAV 120

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L      + I    ++G  +   D   +   +  T  +    + LP   P  + G   
Sbjct: 121 IGLAAVVAFFPIFSGALSGLKSVDPDLARLFDLYGATPLQRLVRLRLPSAVPALLEGHKV 180

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A G A   ++V+E  +         GL   I ES  +    +V   +  +    + L
Sbjct: 181 AAGLAVIGAVVAEFVAGSG---GAQGLAWRILESYNRLQTAKVFAALFTLALLGVVL 234



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 78/242 (32%), Gaps = 10/242 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI   +  + A +    +    L        P   +    +      L   A  T    L
Sbjct: 3   RILAPLILIAALLAGWELACKALAVPAYLLPPPSAIWEAFVA-SWPLLLGSAWATLSTAL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A++I+ L     A L + +  L   + PI   +Q  P++       ++    +P     
Sbjct: 62  LALIIASLIACGLALLVSLNGFLEDAVRPIAVTLQVTPLVAIAPLVTIWAGIDHP----- 116

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A I        + +       L ++  DL  +   +  +  Q+   L +P ++P L+
Sbjct: 117 -ERAVIGLAAVVAFFPIFSGALSGLKSVDPDLARLFDLYGATPLQRLVRLRLPSAVPALL 175

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
               ++        V +E +          G+   I  +        +  A+ T+  +  
Sbjct: 176 EGHKVAAGLAVIGAVVAEFVAGSG---GAQGLAWRILESYNRLQTAKVFAALFTLALLGV 232

Query: 254 LY 255
           + 
Sbjct: 233 VL 234


>gi|229010157|ref|ZP_04167367.1| ABC transporter, permease [Bacillus mycoides DSM 2048]
 gi|228751007|gb|EEM00823.1| ABC transporter, permease [Bacillus mycoides DSM 2048]
          Length = 250

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ I+I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGIVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILI 236



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L A +L   ++ +   G +       +     I + + +L       +   T   +L  +
Sbjct: 8   LPALILSGILLALWEVGARIVDEMYILPSPSAIVMKIWALKDILFTVHLPATLYVVLIGI 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++     A L   S  +     P+L   Q+IPI       V++F             
Sbjct: 68  VISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGY--------TIW 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  + Y  L +  ++ EE+  ++  +    F  L +P ++P     +
Sbjct: 120 SKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSAL 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   + 
Sbjct: 180 KIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFV 233

Query: 257 QLL 259
            L+
Sbjct: 234 ILI 236


>gi|328765666|gb|EGF75820.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Batrachochytrium dendrobatidis JAM81]
          Length = 199

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++   +       L A+  +L   ++ + +++Q+IP L  L+  ++  M L P  V   
Sbjct: 5   GVLFGAIVGIPLGILIARYHKLSPWVLSLANVIQTIPALAMLS-VLMLVMGLGPNTV--- 60

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +F++F   +  +  + Y  + N+   L E  ++  ++ +Q    + +P ++  ++ 
Sbjct: 61  ----VFSLFLYSLLPIIKNTYTGISNVDHALLESGKAMGMTKFQVLRMVELPLALAVIMA 116

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  +       VV +  +    T I   G+G  I       D  AI+ A      ++ +
Sbjct: 117 GLRTA-------VVVTIGVATIGTFIGAGGLGDIIIRGTNATDGTAIILAGAIPTALMAI 169

Query: 255 YDQLLF 260
               LF
Sbjct: 170 IADALF 175



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++  +I+ IP+GI I     +S  +   A ++   PA     +++  +         
Sbjct: 3   AYGVLFGAIVGIPLGILIARYHKLSPWVLSLANVIQTIPALAMLSVLMLVMGLGPNT--- 59

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +   +   I+ N   G S   +   E   +  +T ++  R + LP      + G 
Sbjct: 60  -VVFSLFLYSLLPIIKNTYTGISNVDHALLESGKAMGMTKFQVLRMVELPLALAVIMAGL 118

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA        +V+   +     +   GLG  I   T       ++L          AL 
Sbjct: 119 RTA-------VVVTIGVATIGTFIGAGGLGDIIIRGTNATDGTAIILA----GAIPTALM 167

Query: 571 RFLWHPLYLYGTRCL 585
             +   L+ +  R L
Sbjct: 168 AIIADALFGWLERKL 182


>gi|325689324|gb|EGD31330.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK115]
          Length = 259

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 83/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++   +  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVFLAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 90/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +    + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVFLACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|328945142|gb|EGG39297.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1087]
          Length = 259

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 83/231 (35%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++   +  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVFLAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 90/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +    + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVFLACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|167038044|ref|YP_001665622.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040909|ref|YP_001663894.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|166855149|gb|ABY93558.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|166856878|gb|ABY95286.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter pseudethanolicus ATCC
           33223]
          Length = 272

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 83/242 (34%), Gaps = 16/242 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIG------IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +   + L I +F     VA+       +  Q    +    T      +     +T+   +
Sbjct: 30  RVTQFALLILFFATWEIVAMYKIVDPFLVSQPSRMLKTIITLSQNGSLFMHIWVTLSETI 89

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +   + +II + + I + +   +S   +P+  +L + P     P+ +  +     N    
Sbjct: 90  IGFTLGTIIGMIIAILLWWSDFLSKVAEPYLVVLNSLPKIALGPIFIVWMG----NGEAP 145

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  + +  +    + ++  G      +  ++  +F  T  +     ILP   P  ++   
Sbjct: 146 IITMALAISLIVTIISLQTGFKEVDEEKIKLLKTFGATKMQILTKCILPASVPTIISAIK 205

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              G +W   I  E        +   GLG  I    +      V+  VLI+      +  
Sbjct: 206 INIGLSWVGVITGEFL------VSKAGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYI 259

Query: 572 FL 573
           F+
Sbjct: 260 FI 261



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       SL  +   T    +    +  +   + A L   S  L  V  P
Sbjct: 59  SQPSRMLKTIITLSQNGSLFMHIWVTLSETIIGFTLGTIIGMIIAILLWWSDFLSKVAEP 118

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 119 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLQTGFKEVD 170

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 171 EEKIKLLKTFGATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFLV------SK 224

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ ++L +  +  L    +
Sbjct: 225 AGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYIFI 261


>gi|307700924|ref|ZP_07637949.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
 gi|307613919|gb|EFN93163.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
          Length = 266

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 81/241 (33%), Gaps = 14/241 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +F L+                     P  +           +   Y   T +  L+
Sbjct: 23  VAPAVFGLILLGAWFATTAGGRIPAFILPTPTAVFRAAGELFATPNFWPYLGNTLVSALA 82

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             ++ LLF+   A        L   + P L   Q+IP +      +++           +
Sbjct: 83  GTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWL--------PAS 134

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA +        + +  S    L ++  ++ E ++    + WQ   ++ +P  +P L+ 
Sbjct: 135 WLAIVVLCAIMVFFPILVSTTVGLRHLSVEVLEAAKLDGANTWQLLRHMELPLVLPSLMG 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +   ++      V  E+++ G       G+G+ I L     D   +  ++ T+  +   
Sbjct: 195 GIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTLATA 248

Query: 255 Y 255
            
Sbjct: 249 I 249



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   ++  +  +P+   I     +++ +QPF     A PA    PL++  +    
Sbjct: 76  TLVSALAGTLLGLLFSVPLAFAIHHFHWLNAAVQPFLGASQAIPAVALAPLLLIWLPASW 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   +  ++++ F     IL +   G      +  E A       W+  R++ LP + P 
Sbjct: 136 LAIVVLCAIMVFF----PILVSTTVGLRHLSVEVLEAAKLDGANTWQLLRHMELPLVLPS 191

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       +   ++V E+   G       G+G  I   +       + + +  +C  
Sbjct: 192 LMGGIRNGITLSITGAVVGEIVIGG------HGMGTLITLQSHNVDTAGMFVSLFTICTL 245

Query: 566 VLAL 569
             A+
Sbjct: 246 ATAI 249


>gi|16272305|ref|NP_438518.1| ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580580|ref|ZP_05848408.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW]
 gi|2501390|sp|Q57306|Y355_HAEIN RecName: Full=Probable ABC transporter permease protein HI_0355
 gi|1573324|gb|AAC22015.1| ABC transporter, permease protein [Haemophilus influenzae Rd KW20]
 gi|260092922|gb|EEW76857.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW]
          Length = 245

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVRQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|323705927|ref|ZP_08117498.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534725|gb|EGB24505.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 269

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +   +     +T+   +V   + +   I + + + +    S   +P+  +L + P   
Sbjct: 68  LSEDGSLFTHIWVTLSETLVGFALGTFSGIVIAVLLWWSNFASKVAEPYLIVLNSLPKIA 127

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ +  +     N    +  + +  +    + ++  G      D  ++  +F  T ++
Sbjct: 128 LGPIFIVWMG----NGEAPIITMGLAISLIVTIISLETGFKQVDEDKIKLLKTFGATKFQ 183

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
                ILP   P  ++      G +W   I  E        +   GLG  I    +    
Sbjct: 184 ILTKCILPASIPTIMSAIKINMGLSWVGVITGEFL------VSKAGLGYLIVYGGQVFKL 237

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V+  VLI+      +   L
Sbjct: 238 DIVMTSVLILSILAALMYVLL 258



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 81/218 (37%), Gaps = 16/218 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +    +  SL  +   T    L    +      V A L   S     V  P
Sbjct: 56  SQPSRMIKTIINLSEDGSLFTHIWVTLSETLVGFALGTFSGIVIAVLLWWSNFASKVAEP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            L ++ S+P +      +V+  N   P   +G  ++ I  I          S+      +
Sbjct: 116 YLIVLNSLPKIALGPIFIVWMGNGEAPIITMGLAISLIVTI---------ISLETGFKQV 166

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++ ++F  + +Q      +P S+P ++  + ++M   W  V+  E +V       
Sbjct: 167 DEDKIKLLKTFGATKFQILTKCILPASIPTIMSAIKINMGLSWVGVITGEFLV------S 220

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   L  ++ ++L +  +  L   LL
Sbjct: 221 KAGLGYLIVYGGQVFKLDIVMTSVLILSILAALMYVLL 258


>gi|261207138|ref|ZP_05921827.1| inner membrane component transport system [Enterococcus faecium TC
           6]
 gi|289565259|ref|ZP_06445710.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Enterococcus faecium D344SRF]
 gi|294615103|ref|ZP_06694989.1| OpuCB [Enterococcus faecium E1636]
 gi|260078766|gb|EEW66468.1| inner membrane component transport system [Enterococcus faecium TC
           6]
 gi|289162915|gb|EFD10764.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCB [Enterococcus faecium D344SRF]
 gi|291592045|gb|EFF23668.1| OpuCB [Enterococcus faecium E1636]
          Length = 213

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                   +  +   +++ +   +Q+IP L  L   +  F           +L AI A+F
Sbjct: 35  VPLGVFLTRFPKAATIVIGLTSALQTIPSLALLALMIPLFGVG--------KLPAIIALF 86

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  + Y  + N+  +  +V++   ++ +Q  + + +P +MP ++  + ++    
Sbjct: 87  IYSLLPILRNTYIGMKNVDWNYRDVAKGMGMTEFQSIFSVELPIAMPTIMAGIRLAA--- 143

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +V+A   +    + I   G+G  I   +       IL   + +  
Sbjct: 144 -VYVIAWATLA---SYIGAGGLGDLIFSGLNNYQPDLILAGTIPVTI 186



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 15/195 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F +Q    ++  G   ++   + +II  II +P+G+++   P  ++ +      L  
Sbjct: 1   MQQFFHQHGSEILSKGFEHLYISGLALIIGIIIAVPLGVFLTRFPKAATIVIGLTSALQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     L++           L   + +   +   IL N   G      ++++VA    
Sbjct: 61  IPSLALLALMIPLFGVG----KLPAIIALFIYSLLPILRNTYIGMKNVDWNYRDVAKGMG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +T ++    + LP   P  + G   A     AW              ++   GLG  I  
Sbjct: 117 MTEFQSIFSVELPIAMPTIMAGIRLAAVYVIAWATL---------ASYIGAGGLGDLIFS 167

Query: 546 STEKGSFPEVVLGVL 560
                    ++ G +
Sbjct: 168 GLNNYQPDLILAGTI 182


>gi|90426006|ref|YP_534376.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90108020|gb|ABD90057.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 272

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + I++   +  GI IG  P  ++ +  F  + +  P     P++   +  
Sbjct: 76  LASLGRLLSALAISTTAALLFGIVIGLLPAANAMLGSFVSVTSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L++ GT   ++ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GENSK----IALIVIGTLPCLIRDLSMKVLELPREQLIKAQTLGASSWQIALRVVLPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G AW   I +E  +        +GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIDSLRLQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDIIIPYVIWIT 245

Query: 564 CFVLALN---RFLWHPLYLY 580
                ++   R L    + +
Sbjct: 246 LLAFLMDFALRLLQRKAFPW 265



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 100/269 (37%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPF-ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L NI P   ++  +    F L+A   V+G    L     +  +P        V  +  
Sbjct: 1   MRLINIRPGRQLALYMAALPFVLVAIGYVLGSEARLAENPNDKLLPALSSMAQAVKQMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
            LD  +    +      +  R+LSA+ IS     ++  +         +L   + +   +
Sbjct: 61  QLDARTGSYLMLSDTLASLGRLLSALAISTTAALLFGIVIGLLPAANAMLGSFVSVTSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    +             E + I  I    +  +   +   +  +PR+    ++
Sbjct: 121 PPLALLPILFIVMGLG--------ENSKIALIVIGTLPCLIRDLSMKVLELPREQLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S WQ    + +P  +P L+ ++ + +   W F++A+E I          G+G  I 
Sbjct: 173 TLGASSWQIALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDS------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  I+  ++ +  + FL D  L
Sbjct: 227 LVRRYLAMDIIIPYVIWITLLAFLMDFAL 255


>gi|295109747|emb|CBL23700.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ruminococcus obeum A2-162]
          Length = 264

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 17/247 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW-QSIGYIVNHFTYQDVL------YVIWL 382
              +  +  RVS  L    F ++  ++  + W  S  +      +   L       +   
Sbjct: 14  RVKREKNLIRVSRALLFLGFLILWEISARLGWIDSFIFSSPSEIWLTFLRMLKDQSLFTH 73

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             IT+   +V  +   ++ I   + +   P +S  ++P+  +L + P +   PL++  + 
Sbjct: 74  IGITLAETLVSFVFTVLLGIGTAVLLWACPRLSRVLEPYLVVLNSLPKSALAPLLIVWLG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  +    + IFG+    + N+  G      +  ++  +   +       I+LP  
Sbjct: 134 ANIQTIIVAGISVAIFGS----IINLYTGFREVDPEKLKLIQTLGGSKKDELTKIVLPSS 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  ++      G      I+ E            GLG  I   ++      V++ ++I+
Sbjct: 190 VPLILSVMKVNIGLCLVGVIIGEFIGARQ------GLGYLIIYGSQTFKLTWVLMSIVIL 243

Query: 563 CCFVLAL 569
           C   + L
Sbjct: 244 CVIAMGL 250



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 15/233 (6%)

Query: 22  LLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L F+++  I   L        + P +I       L   SL  +   T    L + V ++
Sbjct: 30  FLGFLILWEISARLGWIDSFIFSSPSEIWLTFLRMLKDQSLFTHIGITLAETLVSFVFTV 89

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L     A L     RL  VL P L ++ S+P        +V+        ++     AIF
Sbjct: 90  LLGIGTAVLLWACPRLSRVLEPYLVVLNSLPKSALAPLLIVWLGANIQTIIVAGISVAIF 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       ++Y     +  +  ++ ++   S   +   + +P S+P ++  M +++
Sbjct: 150 GSI--------INLYTGFREVDPEKLKLIQTLGGSKKDELTKIVLPSSVPLILSVMKVNI 201

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                 V+  E I          G+G  I    +   L  +L +++ +  +  
Sbjct: 202 GLCLVGVIIGEFIG------ARQGLGYLIIYGSQTFKLTWVLMSIVILCVIAM 248


>gi|262283693|ref|ZP_06061458.1| permease [Streptococcus sp. 2_1_36FAA]
 gi|262260750|gb|EEY79451.1| permease [Streptococcus sp. 2_1_36FAA]
          Length = 257

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 103/260 (39%), Gaps = 20/260 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++  ++  + V  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 16  RQQISLLGMVGLLAVWQVMGWLKL-LPKFILPTPLEICQAFVRDAELLAIHSWATLKVAL 74

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 75  LGLLLGVIIACLLAVLMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 128

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 129 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 186

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 187 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIVLVSVI- 238

Query: 254 LYDQLLFRPMIVWSNKFRLE 273
               LL   ++  S KF ++
Sbjct: 239 ---SLLGMKLVAISEKFVIK 255



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  II   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 68  ATLKVALLGLLLGVIIACLLAVLMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG 127

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   +        W+   +  +P   P
Sbjct: 128 ----ILPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLP 183

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +   ++++  
Sbjct: 184 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIVLVSV 237

Query: 565 FVLALNRFL 573
             L   + +
Sbjct: 238 ISLLGMKLV 246


>gi|238018393|ref|ZP_04598819.1| hypothetical protein VEIDISOL_00218 [Veillonella dispar ATCC 17748]
 gi|237864864|gb|EEP66154.1| hypothetical protein VEIDISOL_00218 [Veillonella dispar ATCC 17748]
          Length = 510

 Score = 77.7 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L  + +RL   ++  ++ + +IP +  L   +                 A+ A+    +
Sbjct: 42  VLIHEYKRLSGPVMLAVNFLYTIPSISMLGLLLYVSGVGNT--------TAVIALVIYAL 93

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             M  + +  L  I  D+ E   +  L+  Q+ W + +P +MP ++  +          +
Sbjct: 94  LPMVRNTFTGLNQIKSDMREAGIALGLTRLQRLWNIEIPLAMPTIMAGIRT-------ML 146

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V +  +    + I   G+G  I   I        +   L +  +  + D L 
Sbjct: 147 VMTIALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAIVVDALF 198



 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 59/182 (32%), Gaps = 16/182 (8%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + I     +S  +      L   P+     L++      +    + L +  +      ++
Sbjct: 42  VLIHEYKRLSGPVMLAVNFLYTIPSISMLGLLLYVSGVGNTTAVIALVIYALL----PMV 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G +   +D +E   +  +T  +    I +P   P  + G  T         +++ 
Sbjct: 98  RNTFTGLNQIKSDMREAGIALGLTRLQRLWNIEIPLAMPTIMAGIRT-------MLVMTI 150

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +     +   GLG  I            + G L++    + ++      L+  G R  
Sbjct: 151 ALTGIASFIGAGGLGVAIYRGITTNQSALTIAGSLLIALLAIVVD-----ALFSLGERVT 205

Query: 586 RL 587
           R+
Sbjct: 206 RI 207


>gi|219683305|ref|YP_002469688.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241191266|ref|YP_002968660.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196672|ref|YP_002970227.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|219620955|gb|ACL29112.1| possible permease protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240249658|gb|ACS46598.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251226|gb|ACS48165.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289177381|gb|ADC84627.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295794259|gb|ADG33794.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 270

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 89/255 (34%), Gaps = 15/255 (5%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           +  +   P   + R +P +  ++A +L+  +     H           +    I +   +
Sbjct: 7   LRNHTDRPRRQAWRHWPTVVTVVALLLIWQVWVDAAHPPVTMVSSPTQIVRSAI-ISWPT 65

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T +  +    I+ +   +       SR     L P+L   Q++P++      +
Sbjct: 66  LWPATCMTFIEGVCGFAIACVLGVLLGIGIHCSRTAYAALFPLLTAAQTLPLISIAPLFL 125

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F     GK++   + AIF         +     + L  +P   ++V+ +   S     
Sbjct: 126 IWFGFEPVGKIVIVAVFAIF--------PIVVQTMRGLAAVPAFYDDVAMTCGASRAWTL 177

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           +++ +  +   +   + +S +  +     +E +          G+G ++  A        
Sbjct: 178 FHVDLRVAARQIFGGVRVSAAYVFATAATAEYLG------ARSGLGIWLQAAYNSFQTPR 231

Query: 241 ILYAMLTMLGVIFLY 255
           I  A   ++ +  L 
Sbjct: 232 IFAATFVIIIMTGLL 246



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 74/244 (30%), Gaps = 23/244 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-------------DVLYVIWLGCI 385
           R        W  VV  VA+ + WQ      +                      +    C+
Sbjct: 13  RPRRQAWRHWPTVVTVVALLLIWQVWVDAAHPPVTMVSSPTQIVRSAIISWPTLWPATCM 72

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T    V    IA ++ + +GI I       + + P        P     PL +    +  
Sbjct: 73  TFIEGVCGFAIACVLGVLLGIGIHCSRTAYAALFPLLTAAQTLPLISIAPLFLIWFGFEP 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   + +++  IF     I+   + G +A P  + +VA +   +      ++ L      
Sbjct: 133 VGKIVIVAVFAIF----PIVVQTMRGLAAVPAFYDDVAMTCGASRAWTLFHVDLRVAARQ 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G   +    +  +  +E           +GLG ++  +      P +     ++   
Sbjct: 189 IFGGVRVSAAYVFATAATAEYLG------ARSGLGIWLQAAYNSFQTPRIFAATFVIIIM 242

Query: 566 VLAL 569
              L
Sbjct: 243 TGLL 246


>gi|281412260|ref|YP_003346339.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
 gi|281373363|gb|ADA66925.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
          Length = 243

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 78/229 (34%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I W+ +       +           F              T+ + +V   I   + +
Sbjct: 9   LVLIAWYLLHFLFPSSLILPGPVETFEVFIKMLNRETFEALLSTLLKGLVSTFIVIAVGL 68

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG  +G    +   ++P   ++ A P   +  +V+         P +  SL +I     
Sbjct: 69  PVGFVMGISDRVYEFLRPLITVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSLIPVA-- 126

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +F  I+G  +      EV   + +      + + L  I+P+ ++    + G  W A +
Sbjct: 127 --IFTTISGVRSVDRKLLEVMKVYRMPRRTILKEVYLGSIWPFVLSILEVSSGNVWKAVV 184

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + E            GLG  I+ + +    P V    +      ++  R
Sbjct: 185 MGEYLCGD------RGLGVLISWARQYVDVPRVYALTIFTVVLGISFER 227



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +L  ++   +++ L         P +  ++    L+  +  +    T L+ L +  I
Sbjct: 4   VFGILLVLIAWYLLHFLFPSSLILPGPVETFEVFIKMLNRETF-EALLSTLLKGLVSTFI 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        +   S R+   L P++ ++Q++P++ +L   +  +   + G V+ + L+ 
Sbjct: 63  VIAVGLPVGFVMGISDRVYEFLRPLITVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSL 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I            F+    + ++ R L EV + +R+        + +    P ++  + +
Sbjct: 123 IPVAI--------FTTISGVRSVDRKLLEVMKVYRMPRRTILKEVYLGSIWPFVLSILEV 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           S    W  VV      +G+ +    G+G  I+ A +  D+  +    LT+  V+ 
Sbjct: 175 SSGNVWKAVV------MGEYLCGDRGLGVLISWARQYVDVPRVYA--LTIFTVVL 221


>gi|145631810|ref|ZP_01787569.1| ABC transporter permease protein [Haemophilus influenzae R3021]
 gi|144982529|gb|EDJ90083.1| ABC transporter permease protein [Haemophilus influenzae R3021]
          Length = 245

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVRQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISSVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   ISS + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISSVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|309972484|gb|ADO95685.1| Probable ABC transporter permease protein [Haemophilus influenzae
           R2846]
          Length = 245

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVGQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLQRFIW 243


>gi|332882586|ref|ZP_08450198.1| ABC transporter, substrate-binding protein, QAT family
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679386|gb|EGJ52371.1| ABC transporter, substrate-binding protein, QAT family
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 530

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 73/197 (37%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            +   L  L A+VI+     +     ++ R+  + L+  ++++ +IP +  L F +    
Sbjct: 36  TAEHLLISLLAIVIATFIGVLLGIFISEYRKYAVWLLGAVNVLYTIPSIALLGFFITITG 95

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      L A+ A+    +  +  S Y  +  I   + E + +   +  Q  W + 
Sbjct: 96  VG--------NLTALIALILYALLPIIRSTYTGITQINPLIVEAAEAMGSTRRQLLWKIK 147

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +  ++P L+  +          V  +  +    + +   G+G  I   I   +    L  
Sbjct: 148 LSLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTLIG 200

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  +   +D LL +
Sbjct: 201 SVLIALLALGFDFLLAK 217



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
               ++  + + L    +   ++ I+IA+ I + +GI+I      +  +     +L   P
Sbjct: 23  SLLREEAPFFLHLTAEHLLISLLAIVIATFIGVLLGIFISEYRKYAVWLLGAVNVLYTIP 82

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +       ++     +L   + L L  +      I+ +   G +       E A +   T
Sbjct: 83  SIALLGFFITITGVGNLTALIALILYALL----PIIRSTYTGITQINPLIVEAAEAMGST 138

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    I L    P  ++G         N   ++   +     +   GLG  I      
Sbjct: 139 RRQLLWKIKLSLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITT 191

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            +    ++G +++    L  +  L
Sbjct: 192 NNSAMTLIGSVLIALLALGFDFLL 215


>gi|170692203|ref|ZP_02883366.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170142633|gb|EDT10798.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 268

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 10/207 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +G       +     V      T+   ++   I +   +  G+W+   P ++    PF +
Sbjct: 47  LGVARRIVEWFVTGSVFRHLYTTLLETMLAFAIGTASGLACGLWLALNPFLAVVFDPFIK 106

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            + + P  +F P+                  L +    + + FNV  G           +
Sbjct: 107 AMNSMPRLIFAPIFALWFGLG----IWSKVALGVTLVFFVVFFNVFQGVREVSPTVLSNS 162

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                +  +  R++ LP    +  +    A G A+  S+V E            G+G  I
Sbjct: 163 RMLGASSRQLMRHVYLPSATSWVFSSLHNAIGIAFVGSVVGEYLGSEK------GVGYLI 216

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
             +        V+ G+L++  F L L+
Sbjct: 217 LLAEGVFDINSVIAGILVLTVFALVLD 243



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 83/242 (34%), Gaps = 21/242 (8%)

Query: 25  FVLVIGIINILLHGIQETTV-------PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            V++ GI+ +   G  +  +       P  +   +       S+ ++   T L  + A  
Sbjct: 19  LVILFGILFLWWLGTSQKWLSPFFFGDPLGVARRIVEWFVTGSVFRHLYTTLLETMLAFA 78

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I            A +  L +V  P +  M S+P L F     ++F      KV      
Sbjct: 79  IGTASGLACGLWLALNPFLAVVFDPFIKAMNSMPRLIFAPIFALWFGLGIWSKVALGVTL 138

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +F +          Q +  +   +   SR    S  Q   ++ +P +   +  ++ 
Sbjct: 139 VFFVVFFNVF--------QGVREVSPTVLSNSRMLGASSRQLMRHVYLPSATSWVFSSLH 190

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            ++   +   V  E +          G+G  I LA    D+ +++  +L +     + D 
Sbjct: 191 NAIGIAFVGSVVGEYLG------SEKGVGYLILLAEGVFDINSVIAGILVLTVFALVLDT 244

Query: 258 LL 259
            +
Sbjct: 245 AV 246


>gi|301169059|emb|CBW28656.1| taurine transporter subunit [Haemophilus influenzae 10810]
          Length = 245

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVRQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRITVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G       A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRITVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|222874671|gb|EEF11802.1| predicted protein [Populus trichocarpa]
          Length = 202

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + LL  V+++  +      + E   P        +      +  +A RT    ++   I
Sbjct: 11  PWVLLLAVILLWQVICSAFEVSEFIFPSPWAIGRQLAEFSGIIAAHAWRTYWVTMAGFGI 70

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   +   L   SR       P++    ++P   F+   VV+F              A
Sbjct: 71  AIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGAGP--------A 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F    + +  ++   L  +  +LE+V R      W     +G+P SMP    ++ +
Sbjct: 123 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSMPYFYGSLKV 182

Query: 199 SMSGGWFFVVASEM 212
           +++  +     SE+
Sbjct: 183 AITLAFVGTTVSEI 196



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 4/141 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T +  +    IA ++ + +G  IG      +   P      A P   F P++V       
Sbjct: 60  TYWVTMAGFGIAIVVGVLLGFLIGSSRLAYAAFYPLMTAFNALPKAAFVPILVVWFGIGA 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   L     + + I+ N+  G +    + ++V        W     + LP   PY
Sbjct: 120 G----PAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGARRWDVLIKVGLPRSMPY 175

Query: 506 YVTGAITACGGAWNASIVSEV 526
           +      A   A+  + VSE+
Sbjct: 176 FYGSLKVAITLAFVGTTVSEI 196


>gi|116691627|ref|YP_837160.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|116649627|gb|ABK10267.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 272

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 18/248 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +AF  +  + +       +  VP + +   +   LD   L    S T  R++    I   
Sbjct: 34  VAFAALWWLASAQRWFPPQLVVPPERLAATLRTLLDTGELRDNLSITLHRLVLGFAIGAT 93

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +  L A+SR     L P  D+++ +P L  +   ++      P K++    A  F 
Sbjct: 94  SGAAFGILLARSRLFADYLRPTFDLLRQLPTLTLIPLLILLIGVDEPLKLVVVGKAVFF- 152

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  + Y  + + PRDL E++R + L  +     + +P ++P L+  + ++++
Sbjct: 153 -------PVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDVLLPAALPPLLTGVRIALA 205

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             W  +VA E++          GIG  + LA +   L  +L  +  +  + F  D+   L
Sbjct: 206 RAWLALVAVELLSADS------GIGQMMELARQMLRLDVVLVDVAVIGLIGFALDRSIAL 259

Query: 259 LFRPMIVW 266
           + R  + W
Sbjct: 260 VQRYALRW 267



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 87/268 (32%), Gaps = 16/268 (5%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
              +P           +  +  H       +             WF     V       +
Sbjct: 4   RALAPNGLRAAVRLPGVARLGHHALWWITPVAFAALWWLASAQRWFPPQLVVPPERLAAT 63

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  +++    +D L       IT+ R+V+   I +      GI +      +  ++P   
Sbjct: 64  LRTLLDTGELRDNLS------ITLHRLVLGFAIGATSGAAFGILLARSRLFADYLRPTFD 117

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           LL   P       ++  +            +++     + +      G    P D  E+A
Sbjct: 118 LLRQLPTLT----LIPLLILLIGVDEPLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMA 173

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + +  +   R ++LP   P  +TG   A   AW A +  E+ S        +G+G  +
Sbjct: 174 RHYGLGRFALLRDVLLPAALPPLLTGVRIALARAWLALVAVELLS------ADSGIGQMM 227

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNR 571
             + +      V++ V ++     AL+R
Sbjct: 228 ELARQMLRLDVVLVDVAVIGLIGFALDR 255


>gi|56694981|ref|YP_165327.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
 gi|56676718|gb|AAV93384.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
          Length = 258

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 75/254 (29%), Gaps = 10/254 (3%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             +       +      W  VV    +         +V    +Q    +     +T   V
Sbjct: 15  MTRWLPAVAATLFALAIWQAVVSLTDLPRFILPGPVLVAETWWQSRWLIAEHTAVTALEV 74

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +   +++ +   + +         +QP      A P     P++   + Y   +   
Sbjct: 75  LIGLACGAVLGVATALQLASSRIARVLVQPMLVFTQALPVFALAPILTLWLGYGLWSKVA 134

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++ F     I      G    P  + ++A +   +      +I +P   P   +G 
Sbjct: 135 MAVLIIYF----PITAAFFDGLMRTPVGYLDLARTMQASPRAVLWHIRVPAALPQLASGL 190

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   +++ E          + GLG  +  +  +     +   +L +    + L+
Sbjct: 191 RLAAVYAPIGAVIGEWVG------ASKGLGYLMLLANGRAKTDLMFAAMLTLGVLSVLLH 244

Query: 571 RFLWHPLYLYGTRC 584
             +           
Sbjct: 245 LAMRRATRRMAGER 258



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 15/248 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +   L  + +   +  L   +    +P  ++           + ++ + T L +L
Sbjct: 17  RWLPAVAATLFALAIWQAVVSLTD-LPRFILPGPVLVAETWWQSRWLIAEHTAVTALEVL 75

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +    +     A   A SR   +++ P+L   Q++P+        ++       KV  
Sbjct: 76  IGLACGAVLGVATALQLASSRIARVLVQPMLVFTQALPVFALAPILTLWLGYGLWSKVAM 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A L   F         +T + +  L   P    +++R+ + S     W++ VP ++P L 
Sbjct: 136 AVLIIYF--------PITAAFFDGLMRTPVGYLDLARTMQASPRAVLWHIRVPAALPQLA 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++       V A    V+G+ V    G+G  + LA        +  AMLT+  +  
Sbjct: 188 SGLRLA------AVYAPIGAVIGEWVGASKGLGYLMLLANGRAKTDLMFAAMLTLGVLSV 241

Query: 254 LYDQLLFR 261
           L    + R
Sbjct: 242 LLHLAMRR 249


>gi|260655141|ref|ZP_05860629.1| ABC transporter, permease protein, cysTW family [Jonquetella
           anthropi E3_33 E1]
 gi|260630063|gb|EEX48257.1| ABC transporter, permease protein, cysTW family [Jonquetella
           anthropi E3_33 E1]
          Length = 248

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  +V                IT  R++    IA +I   + +   +   + + + P   
Sbjct: 36  VRVVVKLGEMAGTSQFYRTVGITFGRILAGFSIAVLIGSVLSVLSVYSDAVQTLLFPVVS 95

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L + P   F  L +  V   +L   +   + +       I  N ++G  +      ++A
Sbjct: 96  VLKSIPVASFAVLCLMWVRTNNLPILISCVVNIPI-----IYINSLSGMKSADVKLLQMA 150

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             + +  +   RYI LP     ++     + G AW +++ +E+       L    +G+ +
Sbjct: 151 KVYRLKFFTRLRYIYLPAAKDQFLAAVSLSSGVAWKSAVAAEIIG-----LPAVAIGSAV 205

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +       E+    +++       ++ +
Sbjct: 206 QTAKVYLETGELFAWTVVILALSALFDKAV 235



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 94/240 (39%), Gaps = 14/240 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +    ++ +L         P  +V  +          +    T  R+L+   I++L
Sbjct: 12  VLCLIGFWQLLAVLTGEELILPSPVRVVVKLGEMAGTSQFYRTVGITFGRILAGFSIAVL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V + L+  S  +  +L P++ +++SIP+  F    +++                I  
Sbjct: 72  IGSVLSVLSVYSDAVQTLLFPVVSVLKSIPVASFAVLCLMWVRTNNLP---------ILI 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +  +    + +    L ++++ +RL  + +  Y+ +P +    +  + +S  
Sbjct: 123 SCVVNIPIIYINSLSGMKSADVKLLQMAKVYRLKFFTRLRYIYLPAAKDQFLAAVSLSSG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   VA+E+I +     P   IGS +  A    +   +    + +L +  L+D+ + +
Sbjct: 183 VAWKSAVAAEIIGL-----PAVAIGSAVQTAKVYLETGELFAWTVVILALSALFDKAVAK 237


>gi|294341776|emb|CAZ90205.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 311

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 91/210 (43%), Gaps = 11/210 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL      T    L   V+  LF +V A L   +R     L+P +   Q++P+L   
Sbjct: 102 SPRSLLLQTWITAQATLLGFVLGGLFGWVLAALMVHARTPERALMPWVVASQTVPVLALA 161

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++   +L    ++   + A++  F    + +T +M Q L    R   E+ +++  S 
Sbjct: 162 PIVLIILGSLGLSGLLPKAVIAMYLCF----FPVTVAMVQGLRAPQRIETELLQTYAASR 217

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ FW L +P ++P +   + ++++ G    + +E+     +     G+G+ +  A    
Sbjct: 218 WQTFWLLRMPSALPYVFPALKVAVAAGLVGAMVAEV-----STGAQGGLGARLLTASYYG 272

Query: 237 DLLAILYAML--TMLGVIFLYDQLLFRPMI 264
           ++L +  A++   +LG+       +   ++
Sbjct: 273 NILQMWAALVMAALLGLGLTAAVAVLERVV 302



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 72/192 (37%), Gaps = 5/192 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT    ++  ++  +    +   +         + P+       P     P+V
Sbjct: 105 SLLLQTWITAQATLLGFVLGGLFGWVLAALMVHARTPERALMPWVVASQTVPVLALAPIV 164

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    L+  L  +++ ++   + +   ++ G  A      E+  ++  + W+ +  +
Sbjct: 165 LIILGSLGLSGLLPKAVIAMYLCFFPVTVAMVQGLRAPQRIETELLQTYAASRWQTFWLL 224

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY       A       ++V+EV++         GLGA +  ++  G+  ++  
Sbjct: 225 RMPSALPYVFPALKVAVAAGLVGAMVAEVSTGAQ-----GGLGARLLTASYYGNILQMWA 279

Query: 558 GVLIMCCFVLAL 569
            +++     L L
Sbjct: 280 ALVMAALLGLGL 291


>gi|262396824|ref|YP_003288677.1| probable inner-membrane permease [Vibrio sp. Ex25]
 gi|262340418|gb|ACY54212.1| probable inner-membrane permease [Vibrio sp. Ex25]
          Length = 199

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 78/196 (39%), Gaps = 10/196 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                 +  A+ +++L       L  ++ R+  V++ +  I+ +IP +      +     
Sbjct: 1   MEHISLVALAVGLAILTGVPIGILITQNERVAKVVLYVASIIITIPSIALFGLMIPLLST 60

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           +  G      + A+  +       +  + Y ++ N+   L E +R   ++ +Q+   + +
Sbjct: 61  IGHGI---GYVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGMTPFQRLKMVEI 117

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  ++      +  +  I  G       G+G +I+  I + D   ++   
Sbjct: 118 PLAIPVIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGISQSDPRQLIVGA 170

Query: 246 LTMLGVIFLYDQLLFR 261
           + +  +  + D  L R
Sbjct: 171 IAVSLLAIIADYGLIR 186



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNP 448
           V + + +A +  +P+GI I     ++  +   A ++   P+   F L++  +S   H   
Sbjct: 7   VALAVGLAILTGVPIGILITQNERVAKVVLYVASIIITIPSIALFGLMIPLLSTIGHGIG 66

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   + ++  +Q  I+ N            +E A    +T ++  + + +P   P  + 
Sbjct: 67  YVPAVITVLLYSQLPIIRNTYTAIHNVEPSLREAARGIGMTPFQRLKMVEIPLAIPVIMA 126

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA         ++     G       GLG +I+    +    ++++G + +    + 
Sbjct: 127 GVRTAVVMNIGVMAIAAYIGAG-------GLGVFISRGISQSDPRQLIVGAIAVSLLAII 179

Query: 569 LNRFLWH 575
            +  L  
Sbjct: 180 ADYGLIR 186


>gi|308235057|ref|ZP_07665794.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114595|ref|YP_003985816.1| hydroxymethylpyrimidine ABC transporter membrane protein
           [Gardnerella vaginalis ATCC 14019]
 gi|310946089|gb|ADP38793.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Gardnerella vaginalis
           ATCC 14019]
          Length = 263

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 80/242 (33%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P +  +   +++                    +    I      LP  A  TT   +
Sbjct: 12  KCLPTVISIAIVLILWQFACQHYKISPNLIPAPTSIAQDTIESFPTLLPA-ALITTQETV 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++++   +       S+ +   L P+L   Q++P++      +++F     GK   
Sbjct: 71  IGFALAIICGILLGVFFHVSKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEMSGK--- 127

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I  +    ++ +     + L  +P    +V+ +   +     W++ +  +   + 
Sbjct: 128 -----IVIVMIFSMFPIAVQTVRGLDAVPSFYTDVALTCGANATWTLWHVKLRVAARQIF 182

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +        +E +   +      G+G ++  A        I  A + ++ +  
Sbjct: 183 GGIKISAAYVLGTAATAEYLGARN------GLGIWLQSAYNSFRTPLIFSATIAIIILTA 236

Query: 254 LY 255
           L 
Sbjct: 237 LL 238



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 67/227 (29%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I W        I          +   T +    ++    IT    V+   +A I  I
Sbjct: 22  IVLILWQFACQHYKISPNLIPAPTSIAQDTIESFPTLLPAALITTQETVIGFALAIICGI 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G++      + S + P        P     P+ +    +          ++++  + +
Sbjct: 82  LLGVFFHVSKLVKSALFPLLCAAQTMPLISIAPIFLIWFGFEMSGK----IVIVMIFSMF 137

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I    + G  A P+ + +VA +          ++ L         G   +       + 
Sbjct: 138 PIAVQTVRGLDAVPSFYTDVALTCGANATWTLWHVKLRVAARQIFGGIKISAAYVLGTAA 197

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            GLG ++  +      P +    + +      L
Sbjct: 198 TAEYLG------ARNGLGIWLQSAYNSFRTPLIFSATIAIIILTALL 238


>gi|225575680|ref|ZP_03784290.1| hypothetical protein RUMHYD_03773 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037137|gb|EEG47383.1| hypothetical protein RUMHYD_03773 [Blautia hydrogenotrophica DSM
           10507]
          Length = 254

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 81/238 (34%), Gaps = 23/238 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTY-------------QDVLYVIWLGCITMFRVVVLII 395
           + +     I + W+++  +    +Y              +   ++    +T+    + + 
Sbjct: 13  WSITALAVILVVWEAVSVLGIVPSYMLPSPVAVCQAFINEFPLLMENAKVTLAEAFLGLG 72

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              +    +   +     +   + P   +    P     PL+V    Y      L   +L
Sbjct: 73  CGVVAGFLMAAAMDHFAKLYQALYPLVVVTQTIPTVAIAPLLVLWFGYE----MLPKVIL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++  T + I   ++ G  +   D   +  S      + +RYI LPG    +      +  
Sbjct: 129 IVIVTFFPITVGLLNGFRSADKDAVNLLRSMGAGKIQIFRYIKLPGAMGQFFASLRISAS 188

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            A   +++SE            GLG Y+    +  +F ++   +L++    L L + +
Sbjct: 189 YAVVGAVISEWLGGFE------GLGVYMTRVKKSFAFDKMFAVILLISVISLILMKLV 240



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 88/251 (35%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   ++V   +++L         P  +        +   L + A  T       +   ++
Sbjct: 18  LAVILVVWEAVSVLGIVPSYML-PSPVAVCQAFINEFPLLMENAKVTLAEAFLGLGCGVV 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A       +L   L P++ + Q+IP +      V++F            L  +  
Sbjct: 77  AGFLMAAAMDHFAKLYQALYPLVVVTQTIPTVAIAPLLVLWFGYEM--------LPKVIL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +T  +     +  +D   + RS      Q F Y+ +P +M     ++ +S S
Sbjct: 129 IVIVTFFPITVGLLNGFRSADKDAVNLLRSMGAGKIQIFRYIKLPGAMGQFFASLRISAS 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 V SE +          G+G Y+     +     + A++  +  +  ++     L
Sbjct: 189 YAVVGAVISEWLGG------FEGLGVYMTRVKKSFAFDKMFAVILLISVISLILMKLVDL 242

Query: 259 LFRPMIVWSNK 269
           L +  + W +K
Sbjct: 243 LQKRCMAWESK 253


>gi|167750630|ref|ZP_02422757.1| hypothetical protein EUBSIR_01607 [Eubacterium siraeum DSM 15702]
 gi|167656309|gb|EDS00439.1| hypothetical protein EUBSIR_01607 [Eubacterium siraeum DSM 15702]
          Length = 273

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V      T+ R ++  II  ++   + + +     +     P+  ++   P     P+V+
Sbjct: 69  VFSSAAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           S          +  ++L    T + +  N +AG  +   +  E+  S+  + ++ +  ++
Sbjct: 129 SITGDISSARIIIAAIL----TFYPVSTNTLAGFKSVGRERHELMRSYGASKFQLYTKML 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    Y+ TG   +   A  ASI+ +    G+      GLG  +++S +      V   
Sbjct: 185 IPSAMSYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 559 VLIMCCFVLAL 569
           ++I    +  L
Sbjct: 239 IVIFSAVIGVL 249



 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A+ T  R L   +I ++  ++ A L   S  +  +  P L I+Q IPILG     +    
Sbjct: 73  AAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVLSITG 132

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++   ++I A +   + + T        +      ++ R+  E+ RS+  S +Q +  + 
Sbjct: 133 DISSARIIIAAILTFYPVST--------NTLAGFKSVGRERHELMRSYGASKFQLYTKML 184

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +M      + +S        +  + +  G+      G+G  ++ ++K      + + 
Sbjct: 185 IPSAMSYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 245 MLTMLGVIFLYDQLL 259
           ++    VI +    L
Sbjct: 239 IVIFSAVIGVLSFYL 253


>gi|153808501|ref|ZP_01961169.1| hypothetical protein BACCAC_02795 [Bacteroides caccae ATCC 43185]
 gi|149128823|gb|EDM20040.1| hypothetical protein BACCAC_02795 [Bacteroides caccae ATCC 43185]
          Length = 255

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L   ++          G     + P  I+ ++        LP +   T       ++  L
Sbjct: 11  LAVLLIAWEAYAKFQSGFSTMFSSPVRIITLLYEKTVSGDLPYHTFITAYESFVGLLFGL 70

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               +   +     +   +  P +  + SIP        +++F      K        I 
Sbjct: 71  FIGCIIGFILVYFPKCSKIAHPYIIALSSIPTFALAPLMIIWFGTGLKMK--------IV 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F S V+   F  Y+    I    +   +    +  Q+FW L  P S+  ++ ++ ++ 
Sbjct: 123 LAFLSTVFITAFQTYEGASKISESDDTFFKINHATNKQRFWMLSFPASLDWVIQSLKLNA 182

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               F V+ +    +G+ +    G+G  I  A    D   +  A++ ++ +   ++ L
Sbjct: 183 G---FCVLGA---FIGEFIASEAGLGYIILKASGLYDTTYVFAAIICIILLSMFFNLL 234



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 10/196 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             + +   IT +   V ++    I   +G  + + P  S    P+   L++ P     PL
Sbjct: 49  GDLPYHTFITAYESFVGLLFGLFIGCIIGFILVYFPKCSKIAHPYIIALSSIPTFALAPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++               +L    T +   F    GAS             H T  + +  
Sbjct: 109 MIIWFGTGLK----MKIVLAFLSTVFITAFQTYEGASKISESDDTFFKINHATNKQRFWM 164

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  P    + +       G     + + E  +         GLG  I +++       V 
Sbjct: 165 LSFPASLDWVIQSLKLNAGFCVLGAFIGEFIA------SEAGLGYIILKASGLYDTTYVF 218

Query: 557 LGVLIMCCFVLALNRF 572
             ++ +    +  N  
Sbjct: 219 AAIICIILLSMFFNLL 234


>gi|254505216|ref|ZP_05117367.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222441287|gb|EEE47966.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 258

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+   + +++++ I  GI IGF PHI S + P+    +  P     P++        
Sbjct: 63  SLMRLGTGMAVSTLLAIFFGIGIGFIPHIRSALAPYIATFSLIPPITILPILFITFGLGE 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           ++       L++ GT   ++          P +    A +   + W+    ++LP + P 
Sbjct: 123 VSK----IALIVIGTAPVMIRATAQAVLDIPREMIIKAETLGASVWQMITRLVLPQVLPK 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +T        AW   I +E  +       TTGLG  I       +   ++  V+ +   
Sbjct: 179 LITALRLGLVPAWIFLISAEAIA------STTGLGYRIFLVRRYLAMDVILPYVVWITLL 232

Query: 566 VLALNR 571
              L+R
Sbjct: 233 AFILDR 238



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 14/197 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + +R+ + M +S L    +         +   L P +     IP +  L    
Sbjct: 56  LWIDTFDSLMRLGTGMAVSTLLAIFFGIGIGFIPHIRSALAPYIATFSLIPPITILPILF 115

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E++ I  I       M  +  Q++ +IPR++   + +   S WQ  
Sbjct: 116 ITFGLG--------EVSKIALIVIGTAPVMIRATAQAVLDIPREMIIKAETLGASVWQMI 167

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P  +P L+  + + +   W F++++E I          G+G  I L  +   +  
Sbjct: 168 TRLVLPQVLPKLITALRLGLVPAWIFLISAEAIASTT------GLGYRIFLVRRYLAMDV 221

Query: 241 ILYAMLTMLGVIFLYDQ 257
           IL  ++ +  + F+ D+
Sbjct: 222 ILPYVVWITLLAFILDR 238


>gi|219670558|ref|YP_002460993.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219540818|gb|ACL22557.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 267

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 10/200 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +           ++    IT    +V  I+ +++   + I + +   IS   +P+  +
Sbjct: 56  RVLKTMINLHQEGVLLHHIAITCMETIVGFILGTVLGTMIAIVLWWSEFISKVSEPYLVI 115

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P     P+ +  +          + ++ +  +    +  V+ G  +   +  ++  
Sbjct: 116 LNSLPKIALGPIFIVWIGAGPA----AIIVMTLAISLIVTILEVLNGFLSIDQEKIKLVQ 171

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F  T  +    ++LP  FP  V       G +W   IV E        +   GLG  I 
Sbjct: 172 TFGGTKIQVLTKVLLPASFPTIVNALKINVGLSWVGVIVGEFL------VSKAGLGYLIV 225

Query: 545 ESTEKGSFPEVVLGVLIMCC 564
              +      V+  V I+  
Sbjct: 226 YGGQVFKLDLVMTSVFILGI 245



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  ++  +        L  + + T +  +   ++  +   + A +   S  +  V  
Sbjct: 51  TSQPSRVLKTMINLHQEGVLLHHIAITCMETIVGFILGTVLGTMIAIVLWWSEFISKVSE 110

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L I+ S+P +      +V+              A I       +      +     +I
Sbjct: 111 PYLVILNSLPKIALGPIFIVWIGAG--------PAAIIVMTLAISLIVTILEVLNGFLSI 162

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++  ++ ++F  +  Q    + +P S P +V  + +++   W  V+  E +V       
Sbjct: 163 DQEKIKLVQTFGGTKIQVLTKVLLPASFPTIVNALKINVGLSWVGVIVGEFLV------S 216

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G  I    +   L  ++ ++  +     L  Q
Sbjct: 217 KAGLGYLIVYGGQVFKLDLVMTSVFILGIAAALMYQ 252


>gi|89896140|ref|YP_519627.1| hypothetical protein DSY3394 [Desulfitobacterium hafniense Y51]
 gi|89335588|dbj|BAE85183.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 269

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 10/200 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
             +           ++    IT    +V  I+ +++   + I + +   IS   +P+  +
Sbjct: 58  RVLKTMINLHQEGVLLHHIAITCMETIVGFILGTVLGTMIAIVLWWSEFISKVSEPYLVI 117

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           L + P     P+ +  +          + ++ +  +    +  V+ G  +   +  ++  
Sbjct: 118 LNSLPKIALGPIFIVWIGAGPA----AIIVMTLAISLIVTILEVLNGFLSIDQEKIKLVQ 173

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +F  T  +    ++LP  FP  V       G +W   IV E        +   GLG  I 
Sbjct: 174 TFGGTKIQVLTKVLLPASFPTIVNALKINVGLSWVGVIVGEFL------VSKAGLGYLIV 227

Query: 545 ESTEKGSFPEVVLGVLIMCC 564
              +      V+  V I+  
Sbjct: 228 YGGQVFKLDLVMTSVFILGI 247



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  ++  +        L  + + T +  +   ++  +   + A +   S  +  V  
Sbjct: 53  TSQPSRVLKTMINLHQEGVLLHHIAITCMETIVGFILGTVLGTMIAIVLWWSEFISKVSE 112

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L I+ S+P +      +V+              A I       +      +     +I
Sbjct: 113 PYLVILNSLPKIALGPIFIVWIGAG--------PAAIIVMTLAISLIVTILEVLNGFLSI 164

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++  ++ ++F  +  Q    + +P S P +V  + +++   W  V+  E +V       
Sbjct: 165 DQEKIKLVQTFGGTKIQVLTKVLLPASFPTIVNALKINVGLSWVGVIVGEFLV------S 218

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G  I    +   L  ++ ++  +     L  Q
Sbjct: 219 KAGLGYLIVYGGQVFKLDLVMTSVFILGIAAALMYQ 254


>gi|282896350|ref|ZP_06304372.1| Probable ABC transporter permease protein [Raphidiopsis brookii D9]
 gi|281198846|gb|EFA73725.1| Probable ABC transporter permease protein [Raphidiopsis brookii D9]
          Length = 238

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 78/196 (39%), Gaps = 5/196 (2%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +     IT+   VV    A+++ + + + +     I   + P+A +L   P    
Sbjct: 24  SDWFILFPALLITIKITVVAFFYAAVLGLLISMIMAQSKWIEKSLYPYAVILQTMPIAAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++  +        +  + ++     + I+ N   G ++   + +++   +    W+ 
Sbjct: 84  APLIIIWLRNNTFAALVLCAWIV---AFFPIISNTTFGLNSIDPNLRDLFRLYKANPWQT 140

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             Y+ LP   PY+++    + G +   ++V+E  +        +GL   +  ++     P
Sbjct: 141 MVYLRLPSALPYFLSALRISGGLSLIGAVVAEFVAGSGGT--NSGLAYQMLMASYNLQIP 198

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    + +
Sbjct: 199 RMFAALIMISALGILI 214



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 9/226 (3%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           + + GI    +P     I  +  D   L      T    + A   + +   + + + A+S
Sbjct: 2   VKITGIPPYLLPSPSRIIQTLISDWFILFPALLITIKITVVAFFYAAVLGLLISMIMAQS 61

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           + +   L P   I+Q++PI       +++  N           A +   +    + +  +
Sbjct: 62  KWIEKSLYPYAVILQTMPIAAIAPLIIIWLRNN-------TFAALVLCAWIVAFFPIISN 114

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L +I  +L ++ R ++ + WQ   YL +P ++P  +  + +S        V +E +
Sbjct: 115 TTFGLNSIDPNLRDLFRLYKANPWQTMVYLRLPSALPYFLSALRISGGLSLIGAVVAEFV 174

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+   + +A     +  +  A++ +  +  L   +L
Sbjct: 175 AGSGGT--NSGLAYQMLMASYNLQIPRMFAALIMISALGILIFLIL 218


>gi|218674414|ref|ZP_03524083.1| glycine betaine/L-proline ABC transporter, permease protein
           [Rhizobium etli GR56]
          Length = 283

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 22/256 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +  +L    +  +F   + L+  V+V+    + L       +      +V        L 
Sbjct: 36  VETVLSAIEAALLFVPPYALIVIVVVLAFFAVSLRAAVLAGLCLGFCLLV-------GLW 88

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             + +T   +  A+VIS+L  F    L ++ + L   + P+LD+MQ++P   +L   V+ 
Sbjct: 89  TASMQTLALVTVAVVISVLIAFPIGVLCSRYKTLEAAVRPVLDVMQTVPPWVYLIPAVMI 148

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F            + AI A     +  M      +   +P+   E+  +         W 
Sbjct: 149 FSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPKVFIELGSAIGAPPRSILWK 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   L+  +   +      VV + ++  G            +   +   ++   L
Sbjct: 201 IEMPLAKQTLLVGLNQCILLSLAMVVLAGLVGAGGLGAE-------VTRGLTRMEMGLGL 253

Query: 243 YAMLTMLGVIFLYDQL 258
            A L ++ V  L D+L
Sbjct: 254 RAGLAIVAVALLLDRL 269



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 4/213 (1%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           + +S   F +P+ + +      L     +  E  L       +          VV     
Sbjct: 6   LQFSPGAFLAPVVDWLNTNFHPLFAAISYVVETVLSAIEAALLFVPPYALIVIVVVLAFF 65

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            ++ ++         +  ++ +      T+  V V ++I+ +I  P+G+       + + 
Sbjct: 66  AVSLRAAVLAGLCLGFCLLVGLWTASMQTLALVTVAVVISVLIAFPIGVLCSRYKTLEAA 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   ++   P  V+    V   S   +   +   +  I      +L       +  P 
Sbjct: 126 VRPVLDVMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI----PPMLRLTTLAFNQVPK 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            F E+ S+           I +P      + G 
Sbjct: 182 VFIELGSAIGAPPRSILWKIEMPLAKQTLLVGL 214


>gi|327471577|gb|EGF17020.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK408]
          Length = 259

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 90/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R       +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGFLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|317406840|gb|EFV86942.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Achromobacter xylosoxidans C54]
          Length = 233

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 16/213 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +        L      + +     +       F     AA   R  +    + 
Sbjct: 21  PFALPATLVQEWQSGRLLPAIGSSLVHYFWGLAAGTALGFAAGLAAATLPRFDLAQAYLA 80

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I++ IP L ++ F + +F   + G        A F I     W   F+ Y ++ N+   
Sbjct: 81  RILRPIPPLAWVVFAIAWFKVSHAG--------AAFVIAIGVFWVNYFATYGAVRNVDPR 132

Query: 165 LEEVSRSFRLSGWQ-KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             E++R+F   G+  +   + +P   PG +  +   +   W  ++A+E++ V       P
Sbjct: 133 YYELARAFGHGGYLARALGVTLPAIAPGALAGVRTGIGQAWMTLIAAELLGV-------P 185

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           G+G  +  A       A++  ML +  V  L D
Sbjct: 186 GMGQEMNAAAGVGAYDAVVVYMLIISLVYTLCD 218



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A++L   P   +    ++     H       + ++  G  W   F            + 
Sbjct: 79  LARILRPIPPLAWVVFAIAWFKVSHAG----AAFVIAIGVFWVNYFATYGAVRNVDPRYY 134

Query: 481 EVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           E+A +F   G       + LP I P  + G  T  G AW   I +E+           G+
Sbjct: 135 ELARAFGHGGYLARALGVTLPAIAPGALAGVRTGIGQAWMTLIAAELLG-------VPGM 187

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G  +  +   G++  VV+ +LI+       +
Sbjct: 188 GQEMNAAAGVGAYDAVVVYMLIISLVYTLCD 218


>gi|311031190|ref|ZP_07709280.1| putative sulfonate transport system permease protein YtlD [Bacillus
           sp. m3-13]
          Length = 268

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 12/198 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT+   +   I+ ++I   +   + + P IS  ++P+  +L A P     P+
Sbjct: 71  GTLLSNISITVTETIFGFILGTLIGTIMAAILWWSPMISRVLEPYLVILNAMPKVALGPI 130

Query: 437 VVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++  +      PN+   + M    +       V        +++ +V  +F  T  + ++
Sbjct: 131 LIVAIG-----PNMGSIITMGAIISVIITTIVVYTAFKEVDDNYLKVLRTFGATRRQLFQ 185

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             +LP  +P  ++      G AW   IV E        + + GLG  I    +  +F  V
Sbjct: 186 QAVLPASYPTIISTLKVNVGLAWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLV 239

Query: 556 VLGVLIMCCFVLALNRFL 573
           +L +LI+  F   + + +
Sbjct: 240 LLSLLIIAVFATIMYQLV 257



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L    S T    +   ++  L   + A +   S  +  VL P L I+ ++P +     
Sbjct: 71  GTLLSNISITVTETIFGFILGTLIGTIMAAILWWSPMISRVLEPYLVILNAMPKVALGPI 130

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V         +    + ++              +Y +   +  +  +V R+F  +  Q
Sbjct: 131 LIVAIGPNMGSIITMGAIISVIITTIV--------VYTAFKEVDDNYLKVLRTFGATRRQ 182

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F    +P S P ++  + +++   W  V+  E +V         G+G  I    +  + 
Sbjct: 183 LFQQAVLPASYPTIISTLKVNVGLAWVGVIVGEFLVSSK------GLGYMIIYGFQVFNF 236

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L +     +  QL+
Sbjct: 237 TLVLLSLLIIAVFATIMYQLV 257


>gi|238784090|ref|ZP_04628105.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           bercovieri ATCC 43970]
 gi|238715067|gb|EEQ07064.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           bercovieri ATCC 43970]
          Length = 384

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 80/196 (40%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128
           +L+ ++ +++       L  +SRR    +   L+I+Q+IP +      +     L     
Sbjct: 184 LLATLLPAVVIGIPLGLLCFRSRRFQNTIFSTLNIIQTIPSIALFGLLIAPLAGLAAIIP 243

Query: 129 -----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G        AI A+    +  +  S+   L ++P  + E ++   ++  Q F+++
Sbjct: 244 WLADHGVSGIGLAPAIIALVLYALLPLVRSVVAGLESVPDSVVESAQGMGMTRSQLFFWV 303

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP ++  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 304 QIPIAMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIMFQGLLSSALDLVLL 356

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 357 GVIPVIVMAVMVDSLF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 19/196 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++  ++ A +I IP+G+         + I     ++   P+   F L+++ ++       
Sbjct: 184 LLATLLPAVVIGIPLGLLCFRSRRFQNTIFSTLNIIQTIPSIALFGLLIAPLAGLAAIIP 243

Query: 450 LWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                           + ++      ++ +V+AG  + P+   E A    +T  + + ++
Sbjct: 244 WLADHGVSGIGLAPAIIALVLYALLPLVRSVVAGLESVPDSVVESAQGMGMTRSQLFFWV 303

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  ++G           ++V+ +   G       GLGA + +     +   V+L
Sbjct: 304 QIPIAMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIMFQGLLSSALDLVLL 356

Query: 558 GVLIMCCFVLALNRFL 573
           GV+ +    + ++   
Sbjct: 357 GVIPVIVMAVMVDSLF 372


>gi|203287675|ref|YP_002222690.1| phosphate ABC transporter, permease protein [Borrelia recurrentis
           A1]
 gi|201084895|gb|ACH94469.1| phosphate ABC transporter, permease protein [Borrelia recurrentis
           A1]
          Length = 512

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 68/163 (41%), Gaps = 8/163 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGF 115
             +      T   +L   +IS+L       + A+   ++     +   +DI+ SIP + F
Sbjct: 297 GGISYLILNTFYVILLTAIISILIGIGTGIMLAEYTSNKVFYKTVSMSVDILSSIPAIIF 356

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             F +++F+ ++   ++   + +   I       +  +  +SL +IP+  +  S +   +
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +    + +P + PG++  +++++        A  +  +G  
Sbjct: 413 KTETIIKILLPAANPGILTGIVLAIGRA-LGETAVLLFTMGTN 454



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++  II+ +I I  GI +            +     +L++ PA +F
Sbjct: 297 GGISYLILNTFYVILLTAIISILIGIGTGIMLAEYTSNKVFYKTVSMSVDILSSIPAIIF 356

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+        + P  +K  + +    
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGA 517
                  I+LP   P  +TG + A G A
Sbjct: 413 KTETIIKILLPAANPGILTGIVLAIGRA 440


>gi|34762738|ref|ZP_00143727.1| Glycine betaine transport system permease protein; Glycine
           betaine-binding protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887588|gb|EAA24668.1| Glycine betaine transport system permease protein; Glycine
           betaine-binding protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 513

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 72/187 (38%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LSA+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +            
Sbjct: 28  LSAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITGVGNT---- 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + +P ++P L
Sbjct: 84  ----TALIALIIYALLPIIRSTYTGIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVL 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          V  +  +    + +   G+G  I   I   +        L +  + 
Sbjct: 140 MSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILA 192

Query: 253 FLYDQLL 259
            ++D +L
Sbjct: 193 LVFDFIL 199



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + +P   P  ++G         N   ++   +  
Sbjct: 104 GIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  +     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNHKRIKYKI 216


>gi|92114473|ref|YP_574401.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91797563|gb|ABE59702.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 220

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 72/185 (38%), Gaps = 8/185 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V V + IA++  +P+GI I     I+  +   A ++   P+   F +++  +S       
Sbjct: 25  VGVAVGIATLTGVPIGIAITKNERIAKTVLYIASIIVTIPSIALFGIMIPILSIIGQGIG 84

Query: 450 -LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   + ++  +Q  I+ N     +      +E A    ++  +  R + +P   P  + 
Sbjct: 85  YMPAVIAVLLYSQLPIIRNTYTAINNVDPALREAARGVGMSQNQRLRMVEIPLAVPVIMA 144

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA         ++     G       GLG  I+    +    +++LG + +    + 
Sbjct: 145 GVRTAVVLNIGVMAIAAYIGAG-------GLGTLISRGISQSDPRQLILGAVAVSVLAII 197

Query: 569 LNRFL 573
           ++  L
Sbjct: 198 VDYAL 202



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A+ I+ L          K+ R+   ++ I  I+ +IP +      +     +  G  
Sbjct: 25  VGVAVGIATLTGVPIGIAITKNERIAKTVLYIASIIVTIPSIALFGIMIPILSIIGQGI- 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A+ A+       +  + Y ++ N+   L E +R   +S  Q+   + +P ++P 
Sbjct: 84  --GYMPAVIAVLLYSQLPIIRNTYTAINNVDPALREAARGVGMSQNQRLRMVEIPLAVPV 141

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +  +       VV +  ++     I   G+G+ I+  I + D   ++   + +  +
Sbjct: 142 IMAGVRTA-------VVLNIGVMAIAAYIGAGGLGTLISRGISQSDPRQLILGAVAVSVL 194

Query: 252 IFLYDQLLF 260
             + D  L 
Sbjct: 195 AIIVDYALL 203


>gi|229083959|ref|ZP_04216259.1| ABC transporter, permease [Bacillus cereus Rock3-44]
 gi|228699349|gb|EEL52034.1| ABC transporter, permease [Bacillus cereus Rock3-44]
          Length = 247

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S +L I W      V       S   I+        + +      T++ V++ I+I+ +
Sbjct: 10  LSSILLIAWEVGARIVDEMYILPSPTAILAKIWALRDILLTVHLPATLYVVLIGIVISIV 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + + + +     I     P        P     PL V    Y          ++ +  
Sbjct: 70  LGVGLAMAMNASKWIERAFYPLLVASQTIPITALAPLFVLWFGYS----IWSKVVVTVLI 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A   +  
Sbjct: 126 TFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALPYFFSALKIAVPLSVI 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + + E            GLG +      +     V   ++++    +     +
Sbjct: 186 GAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVLLV 233



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 91/245 (37%), Gaps = 15/245 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +      ++   +   ++  +     P  I+  +   L    L  +   T   +L 
Sbjct: 4   LLPALILSSILLIAWEVGARIVDEMYILPSPTAILAKI-WALRDILLTVHLPATLYVVLI 62

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +VIS++     A     S+ +     P+L   Q+IPI       V++F          +
Sbjct: 63  GIVISIVLGVGLAMAMNASKWIERAFYPLLVASQTIPITALAPLFVLWFGY--------S 114

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             + +        + +  + Y  L +  ++ EE+  ++  +    F  L +P ++P    
Sbjct: 115 IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKLPSALPYFFS 174

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   
Sbjct: 175 ALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIF 228

Query: 255 YDQLL 259
           +  L+
Sbjct: 229 FVLLV 233


>gi|70728254|ref|YP_258003.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas fluorescens Pf-5]
 gi|68342553|gb|AAY90159.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 280

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 65/158 (41%), Gaps = 10/158 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPIL 104
             + I  I      L  Y       +L++M+ +L+       + ++   +G     + + 
Sbjct: 66  HWIGITTIEHYRDDLLFYLQAHLFLVLASMLAALVVGIPAGIVLSRPSMVGRAERFMQVF 125

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+   
Sbjct: 126 NIGNTVPPLAVLAIALGILGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGS 177

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           L+E +    ++  Q  W + +P ++P ++  + ++++ 
Sbjct: 178 LKEAAVGIGMTPRQVLWKVELPNAVPIIIGGVRVALAI 215



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 9/205 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R     R             +R   +   +   ++ G A+      + + +   T + 
Sbjct: 16  FARIFPAARNGPATRESARRPTKRSPPVAIRYGKGLIGGAAVIALLALLVHWIGITTIEH 75

Query: 376 VLY-VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPAN 431
               +++     +F V+  ++ A ++ IP GI +  RP +  + + F Q+       P  
Sbjct: 76  YRDDLLFYLQAHLFLVLASMLAALVVGIPAGIVL-SRPSMVGRAERFMQVFNIGNTVPPL 134

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               + +  +              +   +   I+ N   G        KE A    +T  
Sbjct: 135 AVLAIALGILGIGSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPR 190

Query: 492 RWWRYIILPGIFPYYVTGAITACGG 516
           +    + LP   P  + G   A   
Sbjct: 191 QVLWKVELPNAVPIIIGGVRVALAI 215


>gi|16080433|ref|NP_391260.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311330|ref|ZP_03593177.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315657|ref|ZP_03597462.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221320573|ref|ZP_03601867.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221324857|ref|ZP_03606151.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus subtilis subsp. subtilis str. SMY]
 gi|7387986|sp|O34742|OPUCD_BACSU RecName: Full=Glycine betaine/carnitine/choline transport system
           permease protein opuCD
 gi|2271392|gb|AAB63771.1| transmembrane protein [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|2635893|emb|CAB15385.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. subtilis str. 168]
          Length = 229

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 77/205 (37%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   + Q   R  L  +  ++ + +       L A+ RRL   +  + +++Q+IP L 
Sbjct: 12  SQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQTIPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I ++F   +  +  + Y  + +I     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKFQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ A      ++ +   L+
Sbjct: 177 ATNGTAIILAGAIPTALMAVIADLV 201



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  +  Q+  YV+          V  ++ A+I+ IP+GI I     +S  +     ++  
Sbjct: 7   LGTYYSQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQT 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA     +++  +          + L +   +   I+ N   G  +  + + E   +  
Sbjct: 67  IPALAMLAVLMLVMGLGANT----VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMG 122

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T ++  R + LP      + G  TA   A   + +      G       GLG  I   +
Sbjct: 123 MTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAG-------GLGDIIVRGS 175

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   ++L   I    +  +   +
Sbjct: 176 NATNGTAIILAGAIPTALMAVIADLV 201


>gi|310816510|ref|YP_003964474.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308755245|gb|ADO43174.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 286

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 76/213 (35%), Gaps = 16/213 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   +  T    L+ +  S+        +  +   +   + P L  +QSIPI+  + 
Sbjct: 78  WAELGSRSLTTLTIALTGLAFSIPIGMALGIIMFRFFVMERAVYPFLVALQSIPIMAIIP 137

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                    +  KV+   L   FAI T+ +          L ++ + +  + R    S W
Sbjct: 138 LIQSALGFGFMPKVLIVILFTFFAIPTTLL--------LGLKSLDQGVLNLFRLQGASWW 189

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IK 234
                 G+P S P L     +S S      V SE+  +        G+G  +  A    K
Sbjct: 190 TMLRKAGLPSSAPALFAGFRISTSMAVIAAVTSELFFMAGR----GGLGQMLVNAKTDFK 245

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLF-RPMIVW 266
            + + A L A  T+   IF+   L+  R    W
Sbjct: 246 YEQMYAALIASTTLSISIFVVFTLVGNRIFASW 278



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 15/216 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      T+   +  +  +  I + +GI +     +   + PF   L + P     P
Sbjct: 78  WAELGSRSLTTLTIALTGLAFSIPIGMALGIIMFRFFVMERAVYPFLVALQSIPIMAIIP 137

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+ S + +  +       L++I  T + I   ++ G  +       +      + W   R
Sbjct: 138 LIQSALGFGFM----PKVLIVILFTFFAIPTTLLLGLKSLDQGVLNLFRLQGASWWTMLR 193

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
              LP   P    G   +   A  A++ SE+           GLG  +  +     + ++
Sbjct: 194 KAGLPSSAPALFAGFRISTSMAVIAAVTSELFFMAGR----GGLGQMLVNAKTDFKYEQM 249

Query: 556 VLGVLI-----MCCFVL--ALNRFLWHPLYLYGTRC 584
              ++      +  FV+   +   ++   Y    R 
Sbjct: 250 YAALIASTTLSISIFVVFTLVGNRIFASWYETAERK 285


>gi|283769434|ref|ZP_06342332.1| ABC transporter, permease protein [Bulleidia extructa W1219]
 gi|283103959|gb|EFC05344.1| ABC transporter, permease protein [Bulleidia extructa W1219]
          Length = 251

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 96/257 (37%), Gaps = 16/257 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------WLGCITMFR 389
            +++      I ++ ++  +   +  Q I  +     +Q +  ++      +L   +M R
Sbjct: 4   KSKKKWTWWVILFWLLIWEIGARLLNQEILLVSPFVVFQRLFQLLKDSHNWFLIGASMVR 63

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+   ++A I+ + +           + + P    + + P   F  L++  V    L P 
Sbjct: 64  VMSGFLLAMILGVLLAYLAYRWNWFKTLMNPVFYTVKSIPVASFVILILVWVKANALAPV 123

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +  S L+     +  +        +     +E++  FHI+  + +RY+ L  I PY  T 
Sbjct: 124 I--SFLVGLPIFYDQIL---KALESQNPSLEEMSIVFHISKKKKFRYLTLAQILPYLETA 178

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A G  W A + +EV            +G+ + E+        +    L++      +
Sbjct: 179 CSLAIGFCWKAGMAAEVIGLPDGA-----IGSQLHEAKVFLDTNSLFAWTLLVIILSSLM 233

Query: 570 NRFLWHPLYLYGTRCLR 586
           +R +   ++      LR
Sbjct: 234 DRMVQIGIHKMIKEVLR 250



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + +L ++L+  I   LL+       P  +   +   L           + +R++S  ++
Sbjct: 11  WWVILFWLLIWEIGARLLNQEILLVSPFVVFQRLFQLLKDSHNWFLIGASMVRVMSGFLL 70

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++   + A LA +      ++ P+   ++SIP+  F+   +V+        VI   +  
Sbjct: 71  AMILGVLLAYLAYRWNWFKTLMNPVFYTVKSIPVASFVILILVWVKANALAPVISFLVG- 129

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              IF  Q+        ++L +    LEE+S  F +S  +KF YL +   +P L     +
Sbjct: 130 -LPIFYDQI-------LKALESQNPSLEEMSIVFHISKKKKFRYLTLAQILPYLETACSL 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   W   +A+E+I + D       IGS +  A    D  ++    L ++ +  L D++
Sbjct: 182 AIGFCWKAGMAAEVIGLPDGA-----IGSQLHEAKVFLDTNSLFAWTLLVIILSSLMDRM 236

Query: 259 L 259
           +
Sbjct: 237 V 237


>gi|311069892|ref|YP_003974815.1| choline ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310870409|gb|ADP33884.1| choline ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 227

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 71/197 (36%), Gaps = 15/197 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
               R  L     ++ + +         A+ RR+   +  + +++Q++P L  L   ++ 
Sbjct: 20  YEFYRHFLMSAYGVLFAAIVGIPVGIFIARYRRVSGWVFAVTNVIQTVPALAMLAVLMLV 79

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                           I ++F   +  +  + Y  + +I     E  ++  ++ +Q    
Sbjct: 80  MGLG--------ANTVILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRM 131

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+
Sbjct: 132 VELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAII 184

Query: 243 YAMLTMLGVIFLYDQLL 259
            A      V+ +   LL
Sbjct: 185 LAGAIPTAVMAVAADLL 201



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 68/191 (35%), Gaps = 15/191 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+I+ IPVGI+I     +S  +     ++   PA     +++  +         
Sbjct: 30  AYGVLFAAIVGIPVGIFIARYRRVSGWVFAVTNVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG----VLIMCCFV 566
            TA   A   + +      G       GLG  I   +   +   ++L       +M    
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILAGAIPTAVMAVAA 198

Query: 567 LALNRFLWHPL 577
             L  +L   L
Sbjct: 199 DLLMAWLERAL 209


>gi|325698064|gb|EGD39945.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK160]
          Length = 259

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243


>gi|225569506|ref|ZP_03778531.1| hypothetical protein CLOHYLEM_05592 [Clostridium hylemonae DSM
           15053]
 gi|225161714|gb|EEG74333.1| hypothetical protein CLOHYLEM_05592 [Clostridium hylemonae DSM
           15053]
          Length = 261

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 81/253 (32%), Gaps = 11/253 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +   R        +  +           W      +   I   S   ++       V   
Sbjct: 3   ISTTRNKQGSRISRYAARVLAVCFWLGVWQTASMKLGQEILLASPASVLQKLAGLSVTLG 62

Query: 380 IWLG-CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W     +  R++    +A ++ + + +       I   + P    + + P   F  L +
Sbjct: 63  FWQAVGYSFVRIISGFFLALVLGMILAVLACRFSVIEILLTPLIVTVKSIPVASFIILCL 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     N ++++S L++      I  N++ G         E+A  F I   R   YI 
Sbjct: 123 IWLP--SRNLSVFISFLIVLPV---IYTNLLEGIRQTDEKLLEMADVFSIGWGRRILYIY 177

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           L  + PY +T    A G  W A + +EV            +G  +  +    + PE+   
Sbjct: 178 LSQLLPYLLTACTLALGLCWKAGVAAEVIGVPDGS-----IGEKLYHAKIYLNTPELFAW 232

Query: 559 VLIMCCFVLALNR 571
            +++        +
Sbjct: 233 TVVIVMISFVFEK 245



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 82/194 (42%), Gaps = 9/194 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V    ++ L        P  ++  +          Q    + +R++S   ++L+   + A
Sbjct: 30  VWQTASMKLGQEILLASPASVLQKLAGLSVTLGFWQAVGYSFVRIISGFFLALVLGMILA 89

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            LA +   + ++L P++  ++SIP+  F+   +++         + +   ++F  F   +
Sbjct: 90  VLACRFSVIEILLTPLIVTVKSIPVASFIILCLIW---------LPSRNLSVFISFLIVL 140

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  ++ + +      L E++  F +   ++  Y+ +   +P L+    +++   W   
Sbjct: 141 PVIYTNLLEGIRQTDEKLLEMADVFSIGWGRRILYIYLSQLLPYLLTACTLALGLCWKAG 200

Query: 208 VASEMIVVGDTVIP 221
           VA+E+I V D  I 
Sbjct: 201 VAAEVIGVPDGSIG 214


>gi|203284137|ref|YP_002221877.1| phosphate ABC transporter, permease protein [Borrelia duttonii Ly]
 gi|201083580|gb|ACH93171.1| phosphate ABC transporter, permease protein [Borrelia duttonii Ly]
          Length = 512

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 68/163 (41%), Gaps = 8/163 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGF 115
             +      T   +L   +IS+L       + A+   ++     +   +DI+ SIP + F
Sbjct: 297 GGISYLILNTFYVILLTAIISILIGIGTGIMLAEYTSNKVFYKTVSMSVDILSSIPAIIF 356

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             F +++F+ ++   ++   + +   I       +  +  +SL +IP+  +  S +   +
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +    + +P + PG++  +++++        A  +  +G  
Sbjct: 413 KTETIIKILLPAANPGILTGIVLAIGRA-LGETAVLLFTMGTN 454



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++  II+ +I I  GI +            +     +L++ PA +F
Sbjct: 297 GGISYLILNTFYVILLTAIISILIGIGTGIMLAEYTSNKVFYKTVSMSVDILSSIPAIIF 356

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+        + P  +K  + +    
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGA 517
                  I+LP   P  +TG + A G A
Sbjct: 413 KTETIIKILLPAANPGILTGIVLAIGRA 440


>gi|153938266|ref|YP_001390731.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. Langeland]
 gi|152934162|gb|ABS39660.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. Langeland]
 gi|295318804|gb|ADF99181.1| putative ABC transporter, permease protein [Clostridium botulinum F
           str. 230613]
          Length = 253

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 15/249 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----IVNHFTYQDVLYVIWLGCI 385
              +  S      ++ IFW  +    ++ I  + +      +        +    WL   
Sbjct: 7   REDKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVF 66

Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ RVV+ I+I+ I+ I +GI  G    +   ++P    + A P      + +      
Sbjct: 67  KSIVRVVIGILISIILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVW---- 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L  +       I      I  NV++G  +      E+A+ + +        I LP   P
Sbjct: 123 -LKSSSVAIFTSILMCCPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKP 181

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++G +   G  W  S+ SEV S     +    L A    +TE     E+    +++  
Sbjct: 182 YIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATE-----ELFAWTIVVVL 236

Query: 565 FVLALNRFL 573
             L   +  
Sbjct: 237 LSLIFEKIF 245



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 104/249 (41%), Gaps = 9/249 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M +  I       ++      ++ +V +  + ++ ++       P+ + + + I      
Sbjct: 1   MKISTIREDKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRY 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                 ++ +R++  ++IS++       +A  +  +  +L P++  +++ P++  +   +
Sbjct: 61  FWLSVFKSIVRVVIGILISIILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIAL 120

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+         + +   AIF         +  ++   + ++ + L E++  + +      
Sbjct: 121 VW---------LKSSSVAIFTSILMCCPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYIL 171

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  ++M +  GW   VASE++      I L  + +   LA +E     
Sbjct: 172 INIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWT 231

Query: 241 ILYAMLTML 249
           I+  +L+++
Sbjct: 232 IVVVLLSLI 240


>gi|293602754|ref|ZP_06685195.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818945|gb|EFF77985.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 284

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 100/280 (35%), Gaps = 29/280 (10%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIG----IINILLHGIQETTVPRDIVDIVPITL------ 56
               I RR+   ++ +L   +++G    +  I          P  I     + +      
Sbjct: 18  RRAGIKRRLRITLWQVLILAVILGSWETLTRIPWFTQNTLFDPFFISQPSRVAVRLWEWL 77

Query: 57  --DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                S+  +   T    +  +V+ +   F+     ++SR L  V  P +    S+P + 
Sbjct: 78  QPGPRSVWPHLWLTLQATMVGLVVGVGSGFIVGMTLSRSRFLADVFNPFIVAFNSMPRIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F+    ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   
Sbjct: 138 FVPLITMFFGLGLASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGA 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q  W + +P +       +  ++S     VV +E +          G+G  +  A+ 
Sbjct: 190 SPRQILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALA 243

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             +   +  A+  +  V          L R ++ W+ +FR
Sbjct: 244 TLNATDMFAAVTLLSIVGIALVYCVTWLERRLLHWAPEFR 283



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 13/181 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+ +     ++    PF     + P   F PL+         +  +    ++ F     
Sbjct: 109 VGMTLSRSRFLADVFNPFIVAFNSMPRIAFVPLITMFFGLGLASKVVTSWFVVFFLVF-- 166

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
             FN   G  +   +  +   +   +  +    + +P    +       A   A    ++
Sbjct: 167 --FNTYKGGRSVERELVDFCRTLGASPRQILWRVRIPTAAAWTFAALPNAISFALIGVVL 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL-W--HPLYLY 580
           +E          TTG+G  +  +    +  ++   V ++    +AL   + W    L  +
Sbjct: 225 AEFVG------STTGMGYLMITALATLNATDMFAAVTLLSIVGIALVYCVTWLERRLLHW 278

Query: 581 G 581
            
Sbjct: 279 A 279


>gi|218463358|ref|ZP_03503449.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli Kim 5]
          Length = 261

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +     F+     I + L GI+ + +P     +    L+  +L      T    L
Sbjct: 13  RAIPALLAGFVFLAAWE-IYVDLSGIKPSILPAPSRILTQGWLNREALISNTWPTLGATL 71

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F FV + L      +   L+PI    Q++P++      V++F          
Sbjct: 72  GGFALSLAFAFVSSILMDFMPSMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL------ 125

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q      RD+ E+  S + S W+ F    +P S+P   
Sbjct: 126 --LPKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPYFF 183

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             + +S++      + +E            G+G YI  A       
Sbjct: 184 AGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNNFRPD 223



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 66  TLGATLGGFALSLAFAFVSSILMDFMPSMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL 125

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R   LP   PY
Sbjct: 126 LPK----ILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPY 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           +  G   +   A   +I +E A          GLG YI  +   
Sbjct: 182 FFAGLRISITYAVVGAIFAEYAG------AARGLGIYILNAKNN 219


>gi|216263740|ref|ZP_03435734.1| phosphate ABC transporter, permease protein [Borrelia afzelii
           ACA-1]
 gi|215979784|gb|EEC20606.1| phosphate ABC transporter, permease protein [Borrelia afzelii
           ACA-1]
          Length = 474

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 247 ILSIPRDSGAYGGISYLIVNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 306

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 307 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 362

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 363 YKYASFALGANKTETIILIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 411

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 412 MGTNLGLATNLNEPSRTLTVHLLML 436



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 258 GGISYLIVNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 317

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 318 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 373

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 374 KTETIILIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 433

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 434 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 472


>gi|291521005|emb|CBK79298.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Coprococcus catus GD/7]
          Length = 272

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I  ++       SL  +   T    L + V+ L    + A L    R    +L P
Sbjct: 59  SSPTRIFKVMLQMAADKSLFYHIGITIGETLVSFVLVLTIGTLIAMLLWWCRSAADILEP 118

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
              ++ S+P        +V+  N             I    T  V++   ++Y +  +I 
Sbjct: 119 YFVVLNSLPKTALAPILIVWLGNNM--------KTIIVCGVTMAVFSTIINLYTAFIHID 170

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D   + R+   +      Y+ +P S+  +V N+ +++      V+  E +         
Sbjct: 171 SDKLLLIRTLGGTRRDILRYIVLPASISAIVSNLKVNIGLCLVGVIIGEFLAANA----- 225

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ +++ +  +  +  QLL
Sbjct: 226 -GLGYLIIYGSQVFRLDYVMLSIIILCILAMVLYQLL 261



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            + +   IT+   +V  ++   I   + + + +    +  ++P+  +L + P     P++
Sbjct: 76  SLFYHIGITIGETLVSFVLVLTIGTLIAMLLWWCRSAADILEPYFVVLNSLPKTALAPIL 135

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     N    + +  +    +  + N+        +D   +  +   T     RYI
Sbjct: 136 IVWLG----NNMKTIIVCGVTMAVFSTIINLYTAFIHIDSDKLLLIRTLGGTRRDILRYI 191

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP      V+      G      I+ E  +         GLG  I   ++      V+L
Sbjct: 192 VLPASISAIVSNLKVNIGLCLVGVIIGEFLA------ANAGLGYLIIYGSQVFRLDYVML 245

Query: 558 GVLIMCCFVLALNRFL 573
            ++I+C   + L + L
Sbjct: 246 SIIILCILAMVLYQLL 261


>gi|187479853|ref|YP_787878.1| ABC transporter permease [Bordetella avium 197N]
 gi|115424440|emb|CAJ50993.1| ABC transporter, permease component [Bordetella avium 197N]
          Length = 284

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+  +   T    L  + + +   FV     A++R L  +  P +    S+P + F+ 
Sbjct: 81  PQSVWPHLWLTLQATLLGLAVGVGSGFVVGLALARNRFLADIFNPFIVAFNSMPRIAFVP 140

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   S  
Sbjct: 141 LITMFFGLGMASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGGSPR 192

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P +       +  ++S     VV +E +          G+G  +  A+   +
Sbjct: 193 QILWRVQIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALATLN 246

Query: 238 LLAILYAMLTMLGVIFLY---DQLLFRPMIVWSNKFR 271
              +  A+  +  V  +       L R ++ W+ +FR
Sbjct: 247 ATDMFAAVTLLSIVGIVLVYCVTCLERRLLHWAPEFR 283



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 60/185 (32%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++ + +       VG+ +     ++    PF     + P   F PL+       
Sbjct: 90  LTLQATLLGLAVGVGSGFVVGLALARNRFLADIFNPFIVAFNSMPRIAFVPLITMFFGLG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +    ++ F       FN   G  +   +  +   +   +  +    + +P    
Sbjct: 150 MASKVVTSWFVVFFLVF----FNTYKGGRSVERELVDFCRTLGGSPRQILWRVQIPTAAA 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       A   A    +++E          TTG+G  +  +    +  ++   V ++  
Sbjct: 206 WTFAALPNAISFALIGVVLAEFVG------STTGMGYLMITALATLNATDMFAAVTLLSI 259

Query: 565 FVLAL 569
             + L
Sbjct: 260 VGIVL 264


>gi|104780260|ref|YP_606758.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas entomophila L48]
 gi|95109247|emb|CAK13944.1| putative glycine betaine/carnitine/choline ABC transporter,
           permease protein [Pseudomonas entomophila L48]
          Length = 237

 Score = 77.3 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL +  V+ I+ +L+H           + I  I      L  Y     + +L++M  +L
Sbjct: 8   GLLGWAAVLVILALLVH----------WIGIDTIARYRDDLGFYLQAHLVLVLASMAAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                     ++  R+      +   ++  +IP L  L   +                 A
Sbjct: 58  AVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSVLGIGAGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+P  L+E +    ++  Q+ W + +P ++P +V  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRV 169

Query: 199 SMSG 202
           +++ 
Sbjct: 170 ALAL 173



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 11/171 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  V+  +A+ + W  I  I  +           L       V+  +  A  + IP GI 
Sbjct: 12  WAAVLVILALLVHWIGIDTIARYRDDLGFYLQAHLVL-----VLASMAAALAVGIPAGIA 66

Query: 408 IGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +     +        F  +    P      + +S +              +   +   I+
Sbjct: 67  LSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSVLGIGAG----PAIFALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            N   G    P   KE A+   +T  +    + LP   P  V G   A   
Sbjct: 123 RNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALAL 173


>gi|220923336|ref|YP_002498638.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219947943|gb|ACL58335.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 258

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 10/203 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++     Q   Y +     T++  +    +A+++ + + I I     +   +      L 
Sbjct: 41  VIMSEFLQTPTYFLRQTAFTLYTTLAGFGLAALLGLVLAIGIVHSRLLEKTVYTLLVALN 100

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     PL V  +    + P + ++L++     + ++ + + G  +   D   +A   
Sbjct: 101 SVPKVALAPLFVIWMGTG-IEPKIGIALML---ALFSVVIDAVLGLRSVDPDMLNLARIS 156

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +       I LP   P    G   A   A   +IV E  +       + GLG  I  +
Sbjct: 157 RASQLAILAKIRLPNALPSIFAGLKVAISFALVGAIVGEFVAG------SEGLGFAILTA 210

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             +   P V + ++++      L
Sbjct: 211 QGQFDTPRVFVCLILLGILGTIL 233



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 85/238 (35%), Gaps = 14/238 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++  ++A    +    + L       +P   V +           +  + T    L+   
Sbjct: 10  SVLGIIAVAFALWEFGVWLIKPPPIILPAPSVIMSEFLQTPTYFLRQTAFTLYTTLAGFG 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ L   V A     SR L   +  +L  + S+P +      V++       K+  A + 
Sbjct: 70  LAALLGLVLAIGIVHSRLLEKTVYTLLVALNSVPKVALAPLFVIWMGTGIEPKIGIALML 129

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F++    V          L ++  D+  ++R  R S       + +P ++P +   + 
Sbjct: 130 ALFSVVIDAV--------LGLRSVDPDMLNLARISRASQLAILAKIRLPNALPSIFAGLK 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +++S      +  E +   +      G+G  I  A  + D   +   ++ +  +  + 
Sbjct: 182 VAISFALVGAIVGEFVAGSE------GLGFAILTAQGQFDTPRVFVCLILLGILGTIL 233


>gi|326331007|ref|ZP_08197306.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325951218|gb|EGD43259.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 275

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 19/262 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWL 382
               Q     R +Y L      VV G    +  + + Y+             D  Y +  
Sbjct: 20  RRLRQRARMLRPAYWLPFVLLLVVLGFGWEMGARRMPYLFAPLGDVASVLTGDPGYFLSN 79

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   +V + I  +    + + +     +   + P A +L+  P     PL+V  + 
Sbjct: 80  TLVTLGEALVGLGIGFVAAFVLAVVVSEIGVVRRAVMPLAVVLSVTPLVAIAPLLVVALG 139

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            + + P + L+ L+ F   + IL NV  G  A P    +V  +   +     R++ +P  
Sbjct: 140 -FGMGPKVVLTALVCF---FPILINVATGLRAVPGPVLQVYRTVAASRLEVLRHLRVPAS 195

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY           +   ++V+E+++ G       GLG+ I  ++ +     V   + ++
Sbjct: 196 LPYVFASLRIVFPLSMIGAVVAELSAAG----SADGLGSVIQVASSQNRLATVWAAIFVL 251

Query: 563 CCFVLALNRFLWHPLYLYGTRC 584
                      W  L     R 
Sbjct: 252 AALGSL---LFW--LVTLAERR 268



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 15/215 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D          T    L  + I  +  FV A + ++   +   ++P+  ++   P++   
Sbjct: 72  DPGYFLSNTLVTLGEALVGLGIGFVAAFVLAVVVSEIGVVRRAVMPLAVVLSVTPLVAIA 131

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV        KV+   L   F         +  ++   L  +P  + +V R+   S 
Sbjct: 132 PLLVVALGFGMGPKVVLTALVCFF--------PILINVATGLRAVPGPVLQVYRTVAASR 183

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +   +L VP S+P +  ++ +         V +E+   G       G+GS I +A  + 
Sbjct: 184 LEVLRHLRVPASLPYVFASLRIVFPLSMIGAVVAELSAAGSAD----GLGSVIQVASSQN 239

Query: 237 DLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSN 268
            L  +  A+  +  +  L   L+    R ++ W  
Sbjct: 240 RLATVWAAIFVLAALGSLLFWLVTLAERRVLHWHQ 274


>gi|299822925|ref|ZP_07054811.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Listeria grayi
           DSM 20601]
 gi|299816454|gb|EFI83692.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Listeria grayi
           DSM 20601]
          Length = 223

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +  ++ + +         A+ +RL   ++   +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSIYGVLFAAIIAIPVGIYIARHKRLANWVIQFANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + A+F   +  +  + Y  + N+   L E  ++  ++ +Q    + +P
Sbjct: 84  --------TTTVVVALFLYSLLPILKNTYTGIQNVDNALLESGKAMGMTKFQVLRMIELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T I   G+G  I       +  AI+ A  
Sbjct: 136 LALSVMMAGIR-------NALVVAIGVAAIGTFIGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               ++ +   LL 
Sbjct: 189 LPTALMAIITDLLL 202



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 11/189 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++ A+II IPVGI+I     +++ +  FA ++   PA     +++  +         
Sbjct: 30  IYGVLFAAIIAIPVGIYIARHKRLANWVIQFANIIQTIPALAMLAVLMLIMGLGTTT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   +   IL N   G     N   E   +  +T ++  R I LP      + G 
Sbjct: 87  -VVVALFLYSLLPILKNTYTGIQNVDNALLESGKAMGMTKFQVLRMIELPLALSVMMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   NA +V+   +     +   GLG  I   T   +   ++L   +    +  + 
Sbjct: 146 R-------NALVVAIGVAAIGTFIGAGGLGDIIVRGTNATNGTAIILAGALPTALMAIIT 198

Query: 571 RFLWHPLYL 579
             L   L  
Sbjct: 199 DLLLGWLER 207


>gi|91783797|ref|YP_559003.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91687751|gb|ABE30951.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 252

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 84/232 (36%), Gaps = 16/232 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIWLGCITMFRVVVLIIIA 397
           W   +  +A   AW  +  +  +             QD   +      T+   ++   +A
Sbjct: 7   WVVGLVVLASWQAWCVVMKVPAYLVPSPAAIVSELVQDAPLLFGSLLATLKITLLAFALA 66

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ + + +     P I + + P+A LL   P     PL++  V     +  + L L   
Sbjct: 67  TLLGVVIALLFVQSPLIEASLFPYAILLQVTPVVAIAPLIIIWVK----DMTVALVLCAT 122

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               + I+ N   G  +       +      T W+    + +P   PY+  G   + G A
Sbjct: 123 LVALFPIISNTALGLRSVNPGLINLFRINRATRWQTLVRLRIPSALPYFFGGLRISSGLA 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              ++V+E  +         GL   I ++  + + P +   +L++    + L
Sbjct: 183 LIGAVVAEFVAG--TGGSGAGLAYQILQAGFQLNIPRLFAALLLITVTGVVL 232



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 10/237 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            + +   VL       ++  +    VP     +  +  D   L      T    L A  +
Sbjct: 6   PWVVGLVVLASWQAWCVVMKVPAYLVPSPAAIVSELVQDAPLLFGSLLATLKITLLAFAL 65

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + L   V A L  +S  +   L P   ++Q  P++      +++  ++    V+ A L A
Sbjct: 66  ATLLGVVIALLFVQSPLIEASLFPYAILLQVTPVVAIAPLIIIWVKDMTVALVLCATLVA 125

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F I +        +    L ++   L  + R  R + WQ    L +P ++P     + +
Sbjct: 126 LFPIIS--------NTALGLRSVNPGLINLFRINRATRWQTLVRLRIPSALPYFFGGLRI 177

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           S        V +E +          G+   I  A  + ++  +  A+L +     + 
Sbjct: 178 SSGLALIGAVVAEFVAGTGGSGA--GLAYQILQAGFQLNIPRLFAALLLITVTGVVL 232


>gi|19705305|ref|NP_602800.1| glycine betaine transport system permease protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713272|gb|AAL94099.1| Glycine betaine transport system permease protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 513

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIITINPLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 IPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIAILALVFDFIL 199



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + +P   P  ++G         N   ++   +  
Sbjct: 104 GIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  +     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNHKRVKYKI 216


>gi|302337528|ref|YP_003802734.1| binding-protein-dependent transporters inner membrane component
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634713|gb|ADK80140.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta smaragdinae DSM 11293]
          Length = 211

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 8/185 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ I  + II +P+G +I  +P ++  I     +L   P+   F ++V  ++   L   
Sbjct: 11  VLLSIPFSIIISVPIGFFISGKPKLAKIIIYICSILMTIPSLALFGIMVVVLAPVKLGIG 70

Query: 450 LWLSLLMIFG-TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  ++L I   +   I+ N  A  ++      E A    +TG +    I LP   P  + 
Sbjct: 71  ITPAILAIMMYSLLPIIRNTYAALNSVSPRMIEAAKGIGLTGQQILFRIKLPLSIPVIMA 130

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G         NA ++    +     +   GLG +I     + +F  V+ G L++    + 
Sbjct: 131 GVR-------NAIVLGVSVATYASLVGAGGLGYFIFSGIGRANFLMVLSGALVVSALGIG 183

Query: 569 LNRFL 573
           +N  L
Sbjct: 184 INMLL 188



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 82/196 (41%), Gaps = 10/196 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +    +L ++  S++ +       +   +L  +++ I  I+ +IP L      VV    
Sbjct: 5   LQHLKVVLLSIPFSIIISVPIGFFISGKPKLAKIIIYICSILMTIPSLALFGIMVVV--- 61

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P K+      AI AI    +  +  + Y +L ++   + E ++   L+G Q  + + +
Sbjct: 62  LAPVKLGIGITPAILAIMMYSLLPIIRNTYAALNSVSPRMIEAAKGIGLTGQQILFRIKL 121

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+P ++  +  ++  G      + ++  G       G+G +I   I   + L +L   
Sbjct: 122 PLSIPVIMAGVRNAIVLGVSVATYASLVGAG-------GLGYFIFSGIGRANFLMVLSGA 174

Query: 246 LTMLGVIFLYDQLLFR 261
           L +  +    + LL +
Sbjct: 175 LVVSALGIGINMLLMK 190


>gi|254473093|ref|ZP_05086491.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211957814|gb|EEA93016.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 236

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + FV +  ++  +        +P               L  +A  T    +   +  +  
Sbjct: 1   MLFVAIWALVVWIGE-FPPFLLPGPAAVFTAFLNQGAFLLHHAGITAYETVLGFLFGVSA 59

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A L + SRR+ + L+P +   QS+P+       V++F      KV+ A +   F++
Sbjct: 60  GASLAILLSMSRRVRLFLLPPIAATQSLPVFAIAPLLVLWFGFGLASKVVMAVIVIFFSV 119

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            ++         +  L    + L ++ +   L+ WQ   Y+ +P +MP L   M ++   
Sbjct: 120 TST--------FFDGLRRTDQSLLDLGKLHGLNRWQMLRYIRIPAAMPSLASGMRIA--- 168

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               V A    VVG+ V    G+   +  +        +  A++ +  ++   
Sbjct: 169 ---AVFAPIGAVVGEWVGAKGGLAFIMLQSNARMQTATMFAALILLAVMVLSL 218



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 69/227 (30%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +    W  VV               V         +++    IT +  V+  +       
Sbjct: 2   LFVAIWALVVWIGEFPPFLLPGPAAVFTAFLNQGAFLLHHAGITAYETVLGFLFGVSAGA 61

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     +   + P      + P     PL+V    +   +  +   +++ F    
Sbjct: 62  SLAILLSMSRRVRLFLLPPIAATQSLPVFAIAPLLVLWFGFGLASKVVMAVIVIFFS--- 118

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +      G         ++     +  W+  RYI +P   P   +G   A   A   ++
Sbjct: 119 -VTSTFFDGLRRTDQSLLDLGKLHGLNRWQMLRYIRIPAAMPSLASGMRIAAVFAPIGAV 177

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           V E            GL   + +S  +     +   ++++   VL+L
Sbjct: 178 VGEWVG------AKGGLAFIMLQSNARMQTATMFAALILLAVMVLSL 218


>gi|158317436|ref|YP_001509944.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158112841|gb|ABW15038.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 284

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 82/237 (34%), Gaps = 16/237 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQ-----SIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIII 396
           ++   W+  +    +             Y+           VI  G   T+    V  + 
Sbjct: 39  VIVGLWYAFIEVFDLNALVAKDPGAVWKYLFTEPDAAQNRSVILDGLWHTLGDAAVGYVA 98

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
            ++  + V +       +   + P A +L + P     PL+        L  ++   +++
Sbjct: 99  GTLAALGVAVAFVLNRAVEQSLMPVAMMLRSVPLVAMTPLLTLVFGRGLLAVSVIAGIVV 158

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            F      L N++ G  + P    ++  +     +   R + LP   P     A  +  G
Sbjct: 159 FF----PSLVNLVFGLRSGPAAAADLVVAHGGGPFTVLRKVALPSSLPALFVSARISVPG 214

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A   ++++E  + G       GLG ++  + +   +  V   V+++    +A+   +
Sbjct: 215 AIIGALLAEWLATGK------GLGYFMQRAQQTFDYGGVWASVVVITTASVAVYALV 265



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 69/212 (32%), Gaps = 14/212 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +        +   +      T        V   L     A     +R +   L+P+  ++
Sbjct: 68  LFTEPDAAQNRSVILDGLWHTLGDAAVGYVAGTLAALGVAVAFVLNRAVEQSLMPVAMML 127

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +S+P++       + F        + A +   F            ++   L + P    +
Sbjct: 128 RSVPLVAMTPLLTLVFGRGLLAVSVIAGIVVFF--------PSLVNLVFGLRSGPAAAAD 179

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           +  +     +     + +P S+P L  +  +S+ G     + +E +  G       G+G 
Sbjct: 180 LVVAHGGGPFTVLRKVALPSSLPALFVSARISVPGAIIGALLAEWLATGK------GLGY 233

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++  A +  D   +  +++ +         L+
Sbjct: 234 FMQRAQQTFDYGGVWASVVVITTASVAVYALV 265


>gi|310779518|ref|YP_003967851.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
 gi|309748841|gb|ADO83503.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
          Length = 215

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 70/186 (37%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A++++++          K++++   ++   ++ Q++P L      +      +      
Sbjct: 30  IAVLLAVIVGVPLGIYITKNKKVSSAVLNTANVFQTLPSLALFGLIIPIMGIGF------ 83

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               AIF +F   +  +  + Y  + +I   + E  +   ++  Q    + +P ++P ++
Sbjct: 84  --KPAIFVLFLYALLPIIKNTYIGINSIEPSIIEAGKGMGMTKSQILTMVEIPLALPIIM 141

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S          + +I  G       G+G +I   I   +   IL   +    +  
Sbjct: 142 GGIRISTVINIGTATIAALIGAG-------GLGDFIFKGISMSNNNMILAGAVPTALLAI 194

Query: 254 LYDQLL 259
             D +L
Sbjct: 195 SIDFIL 200



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 67/182 (36%), Gaps = 11/182 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A I+ +P+GI+I     +SS +   A +    P+   F L++  +          
Sbjct: 30  IAVLLAVIVGVPLGIYITKNKKVSSAVLNTANVFQTLPSLALFGLIIPIMGIGFK----P 85

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              ++       I+ N   G ++      E      +T  +    + +P   P  + G  
Sbjct: 86  AIFVLFLYALLPIIKNTYIGINSIEPSIIEAGKGMGMTKSQILTMVEIPLALPIIMGGIR 145

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +       + ++ +   G       GLG +I +     +   ++ G +      ++++ 
Sbjct: 146 ISTVINIGTATIAALIGAG-------GLGDFIFKGISMSNNNMILAGAVPTALLAISIDF 198

Query: 572 FL 573
            L
Sbjct: 199 IL 200


>gi|308174735|ref|YP_003921440.1| ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307607599|emb|CBI43970.1| putative permease of ABC transporter [Bacillus amyloliquefaciens
           DSM 7]
 gi|328554667|gb|AEB25159.1| permease of ABC transporter [Bacillus amyloliquefaciens TA208]
 gi|328913075|gb|AEB64671.1| putative permease of ABC transporter [Bacillus amyloliquefaciens
           LL3]
          Length = 270

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 16/163 (9%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           +   ++  + P+  +L A P     P+++  +     +       ++  G    ++   I
Sbjct: 105 WSNRLARILDPYLVILNAMPKVALGPILIVALGPNFTS-------IVAMGAVISVIITTI 157

Query: 470 A---GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
                      ++ +V  +F       ++ +ILP   P  V+      G +W   IV E 
Sbjct: 158 VVFTAFQEVDENYIKVMKTFGAKRRIMFKEVILPACAPAIVSALKVNVGLSWVGVIVGEF 217

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  +   GLG  I    +  +F  V L +LI+  F   +
Sbjct: 218 L------VSEKGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLM 254



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  ++   +   SL  +   T    +   ++  L     A L   S RL  +L P
Sbjct: 56  SSPSAVCRLLVEKIADGSLAAHIGVTLGETVLGFLLGTLLGTCLAALLWWSNRLARILDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   V    + ++           T  ++ +   + 
Sbjct: 116 YLVILNAMPKVALGPILIVALGPNFTSIVAMGAVISVII--------TTIVVFTAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V ++F       F  + +P   P +V  + +++   W  V+  E +V        
Sbjct: 168 ENYIKVMKTFGAKRRIMFKEVILPACAPAIVSALKVNVGLSWVGVIVGEFLV------SE 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +  ++L +     L  Q
Sbjct: 222 KGLGYMIIYGFQVFNFTLVFLSLLIIAIFATLMYQ 256


>gi|297160226|gb|ADI09938.1| ABC transporter permease protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 290

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L +    T    L    I +    V      ++R L  VL P + ++ ++P + 
Sbjct: 81  GTAQGPLWEQVWTTLQEALIGWAIGVAAGVVLGIGLGRARFLADVLGPYIKVLNALPRIV 140

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +++F      KV  A +   F +         F+ +Q    + R+L   SR    
Sbjct: 141 LAPIFLIWFGLGPASKVASAVVLVFFPV--------FFNAFQGAREVDRNLVANSRILGA 192

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q    + +P +   +  ++ +S        +  E I          GIG  +A +  
Sbjct: 193 SNRQVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVATSQS 246

Query: 235 EQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +   +  AM+ +  V  L       L R +  W
Sbjct: 247 TFNAAGVYAAMVILAVVALLAEGLLTFLERRLFRW 281



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   ++   I     + +GI +G    ++  + P+ ++L A P  V  P+ +       
Sbjct: 94  TLQEALIGWAIGVAAGVVLGIGLGRARFLADVLGPYIKVLNALPRIVLAPIFLIWFGLGP 153

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    +     +  +    +++P    +
Sbjct: 154 ASKVASAVVLVFFPVF----FNAFQGAREVDRNLVANSRILGASNRQVTLQVVIPSATSW 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T    + G A   +IV E          T G+G  +A S    +   V   ++I+   
Sbjct: 210 IFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVATSQSTFNAAGVYAAMVILAVV 263

Query: 566 VLA---LNRFLWHPLYLY 580
            L    L  FL   L+ +
Sbjct: 264 ALLAEGLLTFLERRLFRW 281


>gi|291531979|emb|CBK97564.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Eubacterium siraeum 70/3]
          Length = 273

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 79/195 (40%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A+ T  R L   +I ++  ++ A L   S  +  +  P L I+Q IPILG     +    
Sbjct: 73  AAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVLSITG 132

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++   ++I A +   + + T        +      ++ R+  E+ RS+  S  Q +  + 
Sbjct: 133 DISSARIIIAAILTFYPVST--------NTLAGFKSVGRERHELMRSYGASKLQLYTKML 184

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +M      + +S        +  + +  G+      G+G  ++ ++K      + + 
Sbjct: 185 IPSAMSYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 245 MLTMLGVIFLYDQLL 259
           ++    VI +    L
Sbjct: 239 IVIFSAVIGVLSFYL 253



 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V      T+ R ++  II  ++   + + +     +     P+  ++   P     P+V+
Sbjct: 69  VFSSAAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           S          +  ++L    T + +  N +AG  +   +  E+  S+  +  + +  ++
Sbjct: 129 SITGDISSARIIIAAIL----TFYPVSTNTLAGFKSVGRERHELMRSYGASKLQLYTKML 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    Y+ TG   +   A  ASI+ +    G+      GLG  +++S +      V   
Sbjct: 185 IPSAMSYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 559 VLIMCCFVLAL 569
           ++I    +  L
Sbjct: 239 IVIFSAVIGVL 249


>gi|257870708|ref|ZP_05650361.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           gallinarum EG2]
 gi|257804872|gb|EEV33694.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           gallinarum EG2]
          Length = 220

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 72/192 (37%), Gaps = 15/192 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +  ++ + +         +K  R+   ++ I +I+Q+IP L  ++  ++     
Sbjct: 27  RHFLISIYGVLFAAIVGIPLGIWISKKMRMADWVIRIANIIQTIPSLAMISILMIGMGLG 86

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I  IF   +  +  + Y  +  + R+  +V +   ++ WQ+ + + +P
Sbjct: 87  V--------NVVILTIFLYSLLPIIKNTYTGMRQVDRNTLDVGKGMGMTSWQRLYMIELP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+  ++  +          +V +  I      +   G+G  I       +  +I+ A  
Sbjct: 139 LSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATNGASIILAGA 191

Query: 247 TMLGVIFLYDQL 258
               ++ +   L
Sbjct: 192 LPTALMAIITDL 203



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 15/208 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++  YV           +  ++ A+I+ IP+GIWI  +  ++  +   A ++   P+   
Sbjct: 16  ENGGYVFAQFVRHFLISIYGVLFAAIVGIPLGIWISKKMRMADWVIRIANIIQTIPSLAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + L +   +   I+ N   G      +  +V     +T W+ 
Sbjct: 76  ISILMIGMGLG----VNVVILTIFLYSLLPIIKNTYTGMRQVDRNTLDVGKGMGMTSWQR 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP      + G   A   A   + +      G       GLG  I   T   +  
Sbjct: 132 LYMIELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATNGA 184

Query: 554 EVVLG----VLIMCCFVLALNRFLWHPL 577
            ++L       +M         F+   L
Sbjct: 185 SIILAGALPTALMAIITDLGLGFIERRL 212


>gi|225569526|ref|ZP_03778551.1| hypothetical protein CLOHYLEM_05619 [Clostridium hylemonae DSM
           15053]
 gi|225161734|gb|EEG74353.1| hypothetical protein CLOHYLEM_05619 [Clostridium hylemonae DSM
           15053]
          Length = 265

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 11/198 (5%)

Query: 373 YQDVLYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           Y D LYV+     IT+ RVV  + I     +  GI IG +P +     P  ++L   P  
Sbjct: 62  YADALYVLVSNSLITVKRVVTGLFIGGAAGVVTGIIIGLQPVLRGMFYPVVKILRNIPLL 121

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L +           + + + + FG       N+I             A +      
Sbjct: 122 ALIALFLVWFG----GEEIGIIVYIAFGLWIIYTTNIIEAIDNTDRIRINFARTLGAKNM 177

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +  +I+P I P  +     A G AW  ++  E  +         GLG  +  S +   
Sbjct: 178 DVYTNVIIPMIVPNIINATKVALGVAWAIALGGEFLA------AQDGLGRLLIVSQQYME 231

Query: 552 FPEVVLGVLIMCCFVLAL 569
              +++ +++        
Sbjct: 232 TGRMLIILIVFIVLTAIF 249



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   +  T  R+++ + I      V   +      L  +  P++ I+++IP+L  +   +
Sbjct: 69  LVSNSLITVKRVVTGLFIGGAAGVVTGIIIGLQPVLRGMFYPVVKILRNIPLLALIALFL 128

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+F         G E+  I  I        T ++ +++ N  R     +R+        +
Sbjct: 129 VWFG--------GEEIGIIVYIAFGLWIIYTTNIIEAIDNTDRIRINFARTLGAKNMDVY 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P ++    +++   W       + + G+ +    G+G  + ++ +  +   
Sbjct: 181 TNVIIPMIVPNIINATKVALGVAWA------IALGGEFLAAQDGLGRLLIVSQQYMETGR 234

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L  ++  + +  ++  ++
Sbjct: 235 MLIILIVFIVLTAIFGWIV 253


>gi|320450140|ref|YP_004202236.1| binding-protein-dependent transport systems inner membrane
           component [Thermus scotoductus SA-01]
 gi|320150309|gb|ADW21687.1| binding-protein-dependent transport systems inner membrane
           component [Thermus scotoductus SA-01]
          Length = 255

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 75/228 (32%), Gaps = 23/228 (10%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-------------LYVIWLGCITMFRV 390
           L ++   ++        W S    ++ F +                  +     IT   +
Sbjct: 6   LRLWQVGLLLLFLAWWEWASRTGRLDPFFFSQPSEIAGRVWRWFSTGEIYPHLYITTLEM 65

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++   + +++ + +G+W+   P +++ + P+ + L A P  V  P+         L+   
Sbjct: 66  LLAFFLGTLLGVVLGLWLALAPSVAAVLDPYIKALNAIPRVVLAPIFTLWFGLGVLSKVA 125

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+ F       FN   G         + A           R++ LP    +  +  
Sbjct: 126 LGVTLVFFVAF----FNTYQGVKEVSPVVLQNARLLGARPGHLLRHVYLPSAASWIFSSL 181

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            T+ G A   ++V E            GLG  IA++        V  G
Sbjct: 182 RTSIGFAVIGAVVGEYLG------SAAGLGYVIAQAEGVFDTTGVFAG 223



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 87/234 (37%), Gaps = 17/234 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P +I   V        +  +   TTL ML A  +  L   V     A +  +  VL P
Sbjct: 36  SQPSEIAGRVWRWFSTGEIYPHLYITTLEMLLAFFLGTLLGVVLGLWLALAPSVAAVLDP 95

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + +IP +       ++F      KV        F  F        F+ YQ +  + 
Sbjct: 96  YIKALNAIPRVVLAPIFTLWFGLGVLSKVALGVTLVFFVAF--------FNTYQGVKEVS 147

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             + + +R           ++ +P +   +  ++  S+    F V+ +   VVG+ +   
Sbjct: 148 PVVLQNARLLGARPGHLLRHVYLPSAASWIFSSLRTSIG---FAVIGA---VVGEYLGSA 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFRLE 273
            G+G  IA A    D   +   M+ ++  + L D ++ +    ++ W  K   E
Sbjct: 202 AGLGYVIAQAEGVFDTTGVFAGMVVLMVFVLLLDAVVGQVEGRLVRWRPKMEAE 255


>gi|310816315|ref|YP_003964279.1| ABC transporter, permease component [Ketogulonicigenium vulgare
           Y25]
 gi|308755050|gb|ADO42979.1| ABC transporter, permease component [Ketogulonicigenium vulgare
           Y25]
          Length = 270

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 82/247 (33%), Gaps = 16/247 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385
             N L    N  +S+ L       +       +  +  +     T   +  +I  G +  
Sbjct: 14  RPNILSRIWNASLSWKLLSVAIFALIWEMAARSGFNFAFPTFTATMAAMAQMIGDGSMGR 73

Query: 386 ----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               TM  +V+ + I+  + I  GI +G +        P   ++ A P     PLV    
Sbjct: 74  AFLRTMEPLVIGLAISLSVGISAGIAMGLKKSFEWFTLPMFIVMQAAPMAALIPLVTFVY 133

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +  + + +L    +   I  N              +  SF  + W+    IILP 
Sbjct: 134 GIGLASKVVAVVML----SMPVIAMNSYKAVRNVSPSLVAMCHSFTGSRWQQITRIILPA 189

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P    G        ++ ++++E+       +  TG+G  I       +F  +   +L 
Sbjct: 190 ASPMMFAGLRLGVAEGFSGAVLAELL------ITPTGIGDLITYHRSVANFAHMYATILA 243

Query: 562 MCCFVLA 568
           +  F + 
Sbjct: 244 IVLFAII 250



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 83/233 (35%), Gaps = 15/233 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F L+  +           T    +  +  +  D  S+ +   RT   ++  + ISL 
Sbjct: 33  VAIFALIWEMAARSGFNFAFPTFTATMAAMAQMIGD-GSMGRAFLRTMEPLVIGLAISLS 91

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                       +      +P+  +MQ+ P+   +      +      K        + A
Sbjct: 92  VGISAGIAMGLKKSFEWFTLPMFIVMQAAPMAALIPLVTFVYGIGLASK--------VVA 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +  + Y+++ N+   L  +  SF  S WQ+   + +P + P +   + + ++
Sbjct: 144 VVMLSMPVIAMNSYKAVRNVSPSLVAMCHSFTGSRWQQITRIILPAASPMMFAGLRLGVA 203

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            G+   V +E++      I   GIG  I       +   +   +L ++    +
Sbjct: 204 EGFSGAVLAELL------ITPTGIGDLITYHRSVANFAHMYATILAIVLFAII 250


>gi|307299503|ref|ZP_07579303.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914902|gb|EFN45289.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 373

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 94/258 (36%), Gaps = 17/258 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F +RR   +   L + +++I I +  +           I+       D     +   R  
Sbjct: 106 FAARRKLKDKRILSSLLVLIPIASFAVLLGSGHLRELAIMKEYANRSDR--FLEETVRHL 163

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           L    A+V  ++        A    ++   +  +++ +Q+IP +      +     L   
Sbjct: 164 LIAGGAVVAGVIIGVPLGVAANSLPKVEKPVFGVVNFIQTIPSIALFGLLIAPLSYLSRS 223

Query: 130 KVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                EL         A+ A+    +  +  + Y SL  IP D  E +R+  +S  Q   
Sbjct: 224 LPFLRELGITGVGWAPAMIALVLYSLLPIVRNTYSSLKVIPADTVEAARAMGMSRLQVLG 283

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P S+P ++  +  +          + +I  G       G+G ++   + +  +  +
Sbjct: 284 KVEIPISLPVVLAGVRTAAVQAVGNTTMAALIGAG-------GLGVFVFQGLGQAAMDLV 336

Query: 242 LYAMLTMLGVIFLYDQLL 259
           L   L ++ +  + D L+
Sbjct: 337 LLGALPIVALALIVDSLM 354



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      ++   II +P+G+     P +   +      +   P+   F L+++ +SY   
Sbjct: 163 LLIAGGAVVAGVIIGVPLGVAANSLPKVEKPVFGVVNFIQTIPSIALFGLLIAPLSYLSR 222

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +                  + ++  +   I+ N  +     P D  E A +  ++  +  
Sbjct: 223 SLPFLRELGITGVGWAPAMIALVLYSLLPIVRNTYSSLKVIPADTVEAARAMGMSRLQVL 282

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             + +P   P  + G  TA   A  N ++ + + + G       GLG    +    G+ P
Sbjct: 283 GKVEIPISLPVVLAGVRTAAVQAVGNTTMAALIGAGGLGVFVFQGLGQAAMDLVLLGALP 342

Query: 554 EVVLGVLIMCCFVLAL 569
            V L +++     L +
Sbjct: 343 IVALALIVDSLMQLLI 358


>gi|229056495|ref|ZP_04195903.1| ABC transporter, permease [Bacillus cereus AH603]
 gi|228720820|gb|EEL72375.1| ABC transporter, permease [Bacillus cereus AH603]
          Length = 250

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ ++I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  +  P   P
Sbjct: 118 ----IWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKFPSALP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+ +    A   +   + + E            GLG +      +     V   ++++  
Sbjct: 174 YFFSALKIAVPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSL 227

Query: 565 FVLALNRFL 573
             +     +
Sbjct: 228 LAIFFVILI 236



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 19/243 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-----YASRTTLRMLSAM 76
           L A +L   ++ +   G +       +     I + + +L       +   T   +L  +
Sbjct: 8   LPALILSGILLALWEVGARIVDEMYILPSPSAIVMKIWALKDILFTVHLPATLYVVLIGV 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           VIS++     A L   S  +     P+L   Q+IPI       V++F             
Sbjct: 68  VISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGY--------TIW 119

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +        + +  + Y  L +  ++ EE+  ++  +    F  L  P ++P     +
Sbjct: 120 SKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDIFLKLKFPSALPYFFSAL 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      V+ +    +G+ +    G+G +    + + D   +   ++ +  +   + 
Sbjct: 180 KIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFV 233

Query: 257 QLL 259
            L+
Sbjct: 234 ILI 236


>gi|255601958|ref|XP_002537784.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB, putative [Ricinus communis]
 gi|223515085|gb|EEF24600.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB, putative [Ricinus communis]
          Length = 196

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++  II S+  + VG+ +G     S  +  + + + + P  V  P+ V  +     +   
Sbjct: 5   LIGFIIGSVTGVLVGVALGRNKLASDILSIYIKAINSIPRVVLAPIFVMIMGLGLASKVA 64

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++ F     +  N   G      +    A     + W+  R +ILP    +     
Sbjct: 65  LAFIMVFFV----VFANAFQGVREADRNMIANARILGASNWQVTRKVILPSAMSWIFASL 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +   A   +IV E            G+G  I+ +        +   ++++    L   
Sbjct: 121 HISFSFAIIGAIVGEFVG------SLAGIGYLISIAKGTYDAAGLYAAIILVMIVTLGAE 174

Query: 571 RFL 573
             +
Sbjct: 175 YVM 177



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 85/203 (41%), Gaps = 15/203 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   +I  +   +      +++    +L   +  + SIP +      V+        KV 
Sbjct: 5   LIGFIIGSVTGVLVGVALGRNKLASDILSIYIKAINSIPRVVLAPIFVMIMGLGLASKVA 64

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A +   F +F         + +Q +    R++   +R    S WQ    + +P +M  +
Sbjct: 65  LAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASNWQVTRKVILPSAMSWI 116

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
             ++ +S S   F ++ +   +VG+ V  L GIG  I++A    D  A LYA + ++ ++
Sbjct: 117 FASLHISFS---FAIIGA---IVGEFVGSLAGIGYLISIAKGTYD-AAGLYAAIILVMIV 169

Query: 253 FLYDQLLFRPMIVWSNKFRLERT 275
            L  + +   +     ++R +++
Sbjct: 170 TLGAEYVMTLIENRITRWRPQQS 192


>gi|290508903|ref|ZP_06548274.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
 gi|289778297|gb|EFD86294.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
          Length = 226

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 11/227 (4%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +   +  ++     +     ++      ++ V+V + +A  I +P+GI +G+    +  +
Sbjct: 7   LLLATFHWLTQPEHWLGDEGILLRLGQHLYYVLVSMAVACAIALPLGIALGYWRKGAFVV 66

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
                L  A P+     L +    +  +     L  L    +   IL N   G       
Sbjct: 67  INLFNLGRAIPSLGLILLCIIVFGFNDIPVLAALIAL----SIPPILTNTWVGIYHADRP 122

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A +  +T W+    + +P   P  + G  TA       ++V+  A  G       G
Sbjct: 123 LCDAAIALGMTPWQSLWQVRIPLAAPLILAGVRTALVQLIATAVVAAYAGLG-------G 175

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           LG ++ +   +   P+V+ G L++    +               R +
Sbjct: 176 LGRFLIDGLGQRDIPQVIGGSLVVSLLAIGGELLFARCAGRLVHRRI 222



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 90/232 (38%), Gaps = 22/232 (9%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++ +LL      T P   +    I L +     Y       +L +M ++          
Sbjct: 3   GMMTLLLATFHWLTQPEHWLGDEGILLRLGQHLYY-------VLVSMAVACAIALPLGIA 55

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
               R+   V++ + ++ ++IP LG +   ++ F           ++  + A+    +  
Sbjct: 56  LGYWRKGAFVVINLFNLGRAIPSLGLILLCIIVFGFN--------DIPVLAALIALSIPP 107

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  + +  + +  R L + + +  ++ WQ  W + +P + P ++  +  ++       V 
Sbjct: 108 ILTNTWVGIYHADRPLCDAAIALGMTPWQSLWQVRIPLAAPLILAGVRTALVQLIATAVV 167

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +    +G       G+G ++   + ++D+  ++   L +  +    + L  R
Sbjct: 168 AAYAGLG-------GLGRFLIDGLGQRDIPQVIGGSLVVSLLAIGGELLFAR 212


>gi|228951226|ref|ZP_04113338.1| ABC transporter, permease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808424|gb|EEM54931.1| ABC transporter, permease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 250

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLAVWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +    A
Sbjct: 123 VVTVLITCFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALKIA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   + + E            GLG +      +     V   ++++    +     +
Sbjct: 183 VPLSVIGAAIGEWLG------AQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVII 236



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GY--------TIWSKVVVTVLITCFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKL 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P     + +++      V+ +    +G+ +    G+G +    + + D   +  
Sbjct: 167 KLPSALPYFFSALKIAVPLS---VIGA---AIGEWLGAQAGLGYFSKRMMTQLDGAGVFA 220

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ +  +   +  ++
Sbjct: 221 PIVLLSLLAIFFVVII 236


>gi|317046332|ref|YP_004113980.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316947949|gb|ADU67424.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 270

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 83/217 (38%), Gaps = 15/217 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY-ASRTTLRMLSAMVISLLFTFV 85
           L++   + LL G        + +   P       L     + + +R+LS ++IS +    
Sbjct: 37  LILNAADKLLPGFNAMGDAINRMAFQPSPRTGEYLLWTDTAASLIRLLSGVLISAMLALA 96

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                     +  VL P++ +   +P L  L    + F           E++ +  I   
Sbjct: 97  LGLFTGALPVVRAVLAPLVTLFALVPPLAILPILFICFGLG--------EVSKVVLIVIG 148

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +   +   +  IPR+    +++      Q  W + +P  MP L   + +S+S  W 
Sbjct: 149 ITPLIARDLQLQVEKIPREQLVKAQTLGGHSAQILWRVILPQLMPRLFDAVRLSLSSAWL 208

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           F++A+E IV  +      G+G  I L  +   +  IL
Sbjct: 209 FLIAAEAIVATE------GLGYRIFLMRRYLAMDVIL 239



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 10/180 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  ++I++++ + +G++ G  P + + + P   L A  P     P++  C   
Sbjct: 77  AASLIRLLSGVLISAMLALALGLFTGALPVVRAVLAPLVTLFALVPPLAILPILFICFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G    I  ++       P +    A +      +    +ILP + 
Sbjct: 137 GEVSK----VVLIVIGITPLIARDLQLQVEKIPREQLVKAQTLGGHSAQILWRVILPQLM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P        +   AW   I +E        + T GLG  I       +   ++  V  + 
Sbjct: 193 PRLFDAVRLSLSSAWLFLIAAEAI------VATEGLGYRIFLMRRYLAMDVILPYVAWIT 246


>gi|294618447|ref|ZP_06698017.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1679]
 gi|291595288|gb|EFF26611.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1679]
          Length = 223

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 77/195 (39%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 29  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 89  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 141 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 193

Query: 246 -LTMLGVIFLYDQLL 259
            L    ++ + D LL
Sbjct: 194 ALPTALMVIVTDWLL 208



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 23  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 83  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 139 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 191

Query: 557 LGVLIMCCFVLALNRFL 573
            G L     V+  +  L
Sbjct: 192 AGALPTALMVIVTDWLL 208


>gi|321312917|ref|YP_004205204.1| choline ABC transporter permease [Bacillus subtilis BSn5]
 gi|320019191|gb|ADV94177.1| choline ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 226

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L     ++ + +       L A  RRL   +  + +++Q+IP L  L   ++    
Sbjct: 23  SRHFLMSAYGVLFAAVVGVPVGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +
Sbjct: 83  G--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 135 PLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAG 187

Query: 246 LTMLGVIFLYDQLL 259
                V+ +   LL
Sbjct: 188 AIPTAVMAVGADLL 201



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 62/168 (36%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+++ +PVGI I     +S+ +     ++   PA     +++  +         
Sbjct: 30  AYGVLFAAVVGVPVGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   +   +   ++L 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILA 186


>gi|294085534|ref|YP_003552294.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665109|gb|ADE40210.1| ABC transporter, permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 247

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 89/235 (37%), Gaps = 15/235 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++V  +I  L  G+    +P  +  +  +      + ++A  T + +L  +VI      
Sbjct: 14  VIIVWQMIVSLT-GLPGYILPAPMRVLDTLWGSRALIAEHAVVTLIEVLVGLVIGAGLGV 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A   A S    + L PIL   Q++P+        ++       K+  A L   F    
Sbjct: 73  ITAIQLAMSASARLFLRPILVFSQALPVFALAPILTLWLGYGLGSKIAMAVLIIFF---- 128

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +T + +  L   PR   +++++   +       + +P ++P L   + ++     
Sbjct: 129 ----PVTSAFFDGLMKTPRGYLDLAQTMGANTRHIMLKIRIPAALPSLASGLKLA----- 179

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             V A     +G+ V    G+G  + LA        +  AMLT+  +      L+
Sbjct: 180 -AVYAPIGATIGEWVGSSQGLGYLMLLANGRVKTDLMFAAMLTLGVMSVTLYALI 233



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 10/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + I W  +V    +          V    +     +     +T+  V+V ++I + + + 
Sbjct: 14  VIIVWQMIVSLTGLPGYILPAPMRVLDTLWGSRALIAEHAVVTLIEVLVGLVIGAGLGVI 73

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             I +         ++P      A P     P++   + Y  L   + +++L+IF   + 
Sbjct: 74  TAIQLAMSASARLFLRPILVFSQALPVFALAPILTLWLGYG-LGSKIAMAVLIIF---FP 129

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +      G    P  + ++A +           I +P   P   +G   A   A   + +
Sbjct: 130 VTSAFFDGLMKTPRGYLDLAQTMGANTRHIMLKIRIPAALPSLASGLKLAAVYAPIGATI 189

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E          + GLG  +  +  +     +   +L +    + L   +
Sbjct: 190 GEWVG------SSQGLGYLMLLANGRVKTDLMFAAMLTLGVMSVTLYALI 233


>gi|119873094|ref|YP_931101.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
 gi|119674502|gb|ABL88758.1| binding-protein-dependent transport systems inner membrane
           component [Pyrobaculum islandicum DSM 4184]
          Length = 240

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 91/249 (36%), Gaps = 27/249 (10%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQ-----------DVLYVIWLGCITMFRVVVLIIIA 397
           + +   VA+ I WQ + Y++N                D   ++     T+ RV + + IA
Sbjct: 3   YYITALVALFILWQILAYVINKPYLPLFTDVVIYMAEDAQILLRNLVATLARVFISVAIA 62

Query: 398 SIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            +I    G+   +      ++ ++    L    P     P+++               +L
Sbjct: 63  LVIGFVGGLAATWLSERVSANLLRAAILLTYPIPHVALLPILLHLFGI-----ETSKIVL 117

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           M     + I  +V+     FP D   +            +Y+++P   P  +TG   A  
Sbjct: 118 MSLIAFYPIALSVMEWTQRFPRDLATLIHIMGGGRRDIVKYVVMPSALPGILTGLKIAFN 177

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL---ALNRF 572
            A++ S ++E  +       T GLGA I +S  +  + ++   +L +    +   AL   
Sbjct: 178 TAYSVSFIAESLAL------TDGLGALIYDSWHRLDYLQMYAAILTLSGAGVATYALMSL 231

Query: 573 LWHPLYLYG 581
           L   L  + 
Sbjct: 232 LERKLIKWA 240



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 20/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A V +  +  IL + I +  +P     ++ +  D   L +    T  R+  ++ I+L+
Sbjct: 5   ITALVALFILWQILAYVINKPYLPLFTDVVIYMAEDAQILLRNLVATLARVFISVAIALV 64

Query: 82  FTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
             FV    A     R    +L   + +   IP +  L   +  F         G E + I
Sbjct: 65  IGFVGGLAATWLSERVSANLLRAAILLTYPIPHVALLPILLHLF---------GIETSKI 115

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +     + +  S+ +     PRDL  +             Y+ +P ++PG++  + ++
Sbjct: 116 VLMSLIAFYPIALSVMEWTQRFPRDLATLIHIMGGGRRDIVKYVVMPSALPGILTGLKIA 175

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYD 256
            +  +     +E + + D      G+G+ I  +    D L +  A+LT+ G         
Sbjct: 176 FNTAYSVSFIAESLALTD------GLGALIYDSWHRLDYLQMYAAILTLSGAGVATYALM 229

Query: 257 QLLFRPMIVWS 267
            LL R +I W+
Sbjct: 230 SLLERKLIKWA 240


>gi|312958931|ref|ZP_07773450.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
 gi|311286701|gb|EFQ65263.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas fluorescens WH6]
          Length = 238

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPIL 104
             + I  I L    L  Y     + +L +M+ +L+       L ++   +G     + I 
Sbjct: 24  HWIGINTIELYRDDLLFYLQAHLILVLVSMLAALIVGIPAGILLSRPNWVGRAERFMQIF 83

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+   
Sbjct: 84  NIGNTVPPLAVLAIALGVLGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGS 135

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           L+E +    ++  Q  + + +P ++P ++  + ++++ 
Sbjct: 136 LKEAATGIGMTPRQVLFRVELPNAVPIIIGGVRVALAI 173



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 6/140 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPANVFFPL 436
           +++     +  V+V ++ A I+ IP GI +     +           +    P      +
Sbjct: 38  LLFYLQAHLILVLVSMLAALIVGIPAGILLSRPNWVGRAERFMQIFNIGNTVPPLAVLAI 97

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +              +   +   I+ N   G        KE A+   +T  +    
Sbjct: 98  ALGVLGIGSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAATGIGMTPRQVLFR 153

Query: 497 IILPGIFPYYVTGAITACGG 516
           + LP   P  + G   A   
Sbjct: 154 VELPNAVPIIIGGVRVALAI 173


>gi|291299834|ref|YP_003511112.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290569054|gb|ADD42019.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 276

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 13/259 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R     R      +  L        +L I+W            W S+  I++ FT   
Sbjct: 8   PGRLTVAWRPIRTLLWRLLLWFGLPVALLTIWWLASDGSRDFY--WPSLRDILHTFTQLW 65

Query: 376 VLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
            L       + ++ R+      AS + I +G+ IG    I +  +P  +   A P  V  
Sbjct: 66  TLDRWRADILPSLARLAAGYAAASALGIALGVLIGLNWRIRALCEPVLEFFRAVPPPV-- 123

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             +V  +  +    +   +++++ G  W IL N + G        ++  + F +      
Sbjct: 124 --LVPVIMLFTGVGDTMKAVVIVSGCVWPILLNTVTGVRGIDPVQRDTCAVFALRPLTRL 181

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P+  TG   A        +VSE+ +        +GLG  I +       PE
Sbjct: 182 RRLVLPAAAPHIATGMRQALSIGIILMVVSEMFA------AHSGLGFAIVQFQRGFQIPE 235

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +  G++++    + L+   
Sbjct: 236 MWSGIILLGLIGVTLSLLF 254



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 17/186 (9%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L   + R+  +  P+L+  +++P    +   +++       K           I 
Sbjct: 93  IALGVLIGLNWRIRALCEPVLEFFRAVPPPVLVPVIMLFTGVGDTMKA--------VVIV 144

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +  VW +  +    +  I     +    F L    +   L +P + P +   M  ++S G
Sbjct: 145 SGCVWPILLNTVTGVRGIDPVQRDTCAVFALRPLTRLRRLVLPAAAPHIATGMRQALSIG 204

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LF 260
              +V SEM           G+G  I    +   +  +   ++ +  +      L   + 
Sbjct: 205 IILMVVSEMFA------AHSGLGFAIVQFQRGFQIPEMWSGIILLGLIGVTLSLLFTVVE 258

Query: 261 RPMIVW 266
           R ++ W
Sbjct: 259 RRVLAW 264


>gi|325695730|gb|EGD37629.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK150]
          Length = 259

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243



 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 248


>gi|254511998|ref|ZP_05124065.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535709|gb|EEE38697.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 244

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 10/250 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++  S    +      W  +V    +         +V    +Q    +      T   V+
Sbjct: 1   MRYLSALAATVFAIAIWQGIVSVAGLPKFILPGPAVVAETWWQSRWLIATHTWTTAIEVL 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +   + + +   + +         +QP      A P     PL+   + Y   +    
Sbjct: 61  IGLACGTALGVITALQLASSRAARVLVQPMLVFTQALPVFALAPLLTLWLGYGLWSKVAM 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++ F     I  +   G    P  + ++A +  ++      +I +P   P   +G  
Sbjct: 121 AVLIIYF----PITSSFFDGLMRTPPGYLDLARTMQVSKRSILWHIRIPAALPSLASGMR 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A   A   +++ E          + GLG  +  +  +     +   +L +  F + L+ 
Sbjct: 177 LAAVYAPIGAVIGEWVG------SSQGLGYLMLLANGRAKTDLMFAAMLTLGVFSILLHM 230

Query: 572 FLWHPLYLYG 581
            +        
Sbjct: 231 AVRRATARMA 240



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 92/248 (37%), Gaps = 14/248 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            F + I    + + G+ +  +P   V           +  +   T + +L  +       
Sbjct: 11  VFAIAIWQGIVSVAGLPKFILPGPAVVAETWWQSRWLIATHTWTTAIEVLIGLACGTALG 70

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A SR   +++ P+L   Q++P+        ++       KV  A L   F   
Sbjct: 71  VITALQLASSRAARVLVQPMLVFTQALPVFALAPLLTLWLGYGLWSKVAMAVLIIYF--- 127

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T S +  L   P    +++R+ ++S     W++ +P ++P L   M ++    
Sbjct: 128 -----PITSSFFDGLMRTPPGYLDLARTMQVSKRSILWHIRIPAALPSLASGMRLA---- 178

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              V A    V+G+ V    G+G  + LA        +  AMLT+     L    + R  
Sbjct: 179 --AVYAPIGAVIGEWVGSSQGLGYLMLLANGRAKTDLMFAAMLTLGVFSILLHMAVRRAT 236

Query: 264 IVWSNKFR 271
              + + R
Sbjct: 237 ARMAGEVR 244


>gi|218462090|ref|ZP_03502181.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli Kim 5]
          Length = 309

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+           GI
Sbjct: 205 LDLMRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGATA-----GI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTVDIWAALVAGSLLAGILVAIV 293



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N                  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +       T G+G+ 
Sbjct: 208 MRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----TAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTVDIWAALVAGSLLAGIL 289


>gi|219849977|ref|YP_002464410.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
 gi|219544236|gb|ACL25974.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
          Length = 272

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 89/269 (33%), Gaps = 15/269 (5%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            S    +P++   + L   +             L     +     + WF  V    +   
Sbjct: 1   MSEEASAPITPPTRPLSVQVTWRIRLAEYGPPALLVIGLLLLWEGLVWFWTVPVWLLPPP 60

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
            + +  ++          ++     T+   +    +A +    +G+ +   P +   + P
Sbjct: 61  SRIVTTLLGSLP-----VLVEHILATLTVTIPGFALALVTGFGLGVALDASPLLRRALYP 115

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                   P     PL+V    +  L       L++   T + I+ N I G  +   D +
Sbjct: 116 LLVTSQTVPIVAIAPLLVVGFGFGLLPK----VLVVALITFFPIVVNTIDGLQSADRDQR 171

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +  +   T W+  R + L    P   TG   A   +   ++++E          + GLG
Sbjct: 172 RLLEAMGATYWQLLRLLRLRAALPMIFTGIKVAITYSVIGAVLAEWIG------ASAGLG 225

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            YIA S       +V +  L+     +AL
Sbjct: 226 VYIARSLRAFRTDQVFVAALVTSLLTIAL 254



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 87/240 (36%), Gaps = 19/240 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++      +     P  IV  +  +L V  L ++   T    +    ++L+  F     
Sbjct: 45  GLVWFWTVPVWLLPPPSRIVTTLLGSLPV--LVEHILATLTVTIPGFALALVTGFGLGVA 102

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S  L   L P+L   Q++PI+      VV F            L  +  +     + 
Sbjct: 103 LDASPLLRRALYPLLVTSQTVPIVAIAPLLVVGFGFGL--------LPKVLVVALITFFP 154

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    L +  RD   +  +   + WQ    L +  ++P +   + ++++      V 
Sbjct: 155 IVVNTIDGLQSADRDQRRLLEAMGATYWQLLRLLRLRAALPMIFTGIKVAITYSVIGAVL 214

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVW 266
           +E I          G+G YIA +++      +  A L    +   +F    LL R ++ W
Sbjct: 215 AEWIGASA------GLGVYIARSLRAFRTDQVFVAALVTSLLTIALFSLVSLLERWIVFW 268


>gi|237742950|ref|ZP_04573431.1| glycine betaine transport system permease [Fusobacterium sp.
           4_1_13]
 gi|229430598|gb|EEO40810.1| glycine betaine transport system permease [Fusobacterium sp.
           4_1_13]
          Length = 513

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 71/187 (37%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +            
Sbjct: 28  LLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITGVGNT---- 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + +P ++P L
Sbjct: 84  ----TALIALIIYALLPIIRSTYTGIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVL 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          V  +  +    + +   G+G  I   I   +        L +  + 
Sbjct: 140 MSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILA 192

Query: 253 FLYDQLL 259
            ++D +L
Sbjct: 193 LVFDFIL 199



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + +P   P  ++G         N   ++   +  
Sbjct: 104 GIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  +     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNHKRIKYKI 216


>gi|159044487|ref|YP_001533281.1| putative ABC transporter permease [Dinoroseobacter shibae DFL 12]
 gi|157912247|gb|ABV93680.1| putative ABC transporter permease protein [Dinoroseobacter shibae
           DFL 12]
          Length = 273

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 8/228 (3%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +FW  +V          +    +     +     + +G  T++R VV +++A ++ + +G
Sbjct: 38  LFWEGLVWINDWPNFVMASPSDLPPAYARYWELFLIMGWQTLWRTVVGLLLAVVVGVGIG 97

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +GF   +   + P      A P     P+V       H   +    L+    + + I 
Sbjct: 98  MLMGFSRVMRDALYPLLVGFNAIPKATVVPIVALLFVGQH---DFNTILIAFMISFFPIA 154

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            ++  G S    +++++  S   +    +  I LP   P +      +   A+  + + E
Sbjct: 155 VSISIGLSTLEPEYRDILRSLGASKTTIFWKIALPKTLPEFFGALKVSVTLAFIGTNLME 214

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S         GLGA          +P +   ++ +    + L   +
Sbjct: 215 IVSPHGR-----GLGALFDSGKTNSDYPLMFAVLIALAFLGIVLYYIV 257



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 98/270 (36%), Gaps = 18/270 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
            +++    SR +   +  ++ F+L   G++ I          P D+        ++  + 
Sbjct: 15  QSLVKTLTSRAVLAPLGAVIVFLLFWEGLVWINDWPNFVMASPSDLPPAYARYWELFLIM 74

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            +  +T  R +  ++++++       L   SR +   L P+L    +IP    +    + 
Sbjct: 75  GW--QTLWRTVVGLLLAVVVGVGIGMLMGFSRVMRDALYPLLVGFNAIPKATVVPIVALL 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +       +   I   F    + +  S+   L  +  +  ++ RS   S    FW 
Sbjct: 133 FVGQH-------DFNTILIAFMISFFPIAVSISIGLSTLEPEYRDILRSLGASKTTIFWK 185

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P     + +S++  +      E++          G+G+         D   + 
Sbjct: 186 IALPKTLPEFFGALKVSVTLAFIGTNLMEIVS-----PHGRGLGALFDSGKTNSDYPLMF 240

Query: 243 YAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
             ++ +  +  +   +   L R    W+ +
Sbjct: 241 AVLIALAFLGIVLYYIVVALERIFAGWAER 270


>gi|302342633|ref|YP_003807162.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Desulfarculus baarsii DSM 2075]
 gi|301639246|gb|ADK84568.1| binding-protein-dependent transport systems inner membrane
           component [Desulfarculus baarsii DSM 2075]
          Length = 252

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 81/253 (32%), Gaps = 22/253 (8%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------------YVIWLGCITMFRVVVL 393
           ++ F V   V + + W +   +         L             +      T+ R +  
Sbjct: 4   LWPFAVSLAVMLALGWLATWLLGPELAPPPPLVCAEMWRLCLDGQMFGEMGATVVRALAG 63

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  A+++ + +G+  G  P     + P    L A P  V+  L +       L P L   
Sbjct: 64  VAAANLLGLGLGLAAGLWPAALRALAPLVAALQACPPVVWISLAMIWAGTGSLVPMLA-- 121

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
             +   T   +  NV  G  A      +++  + +      R   LPG+ PY++      
Sbjct: 122 --VFAATLPPLFLNVAQGVLALDRRLFDMSRLYDVPAATRLRRFWLPGVRPYWLAAFSQT 179

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               W  + V+E            G GA I  +  +    ++      +    + L   L
Sbjct: 180 LASGWKVAAVAEFLGSHQ------GAGARIFWAYRRMDLVDLYAWTGALVLLGVVLEYGL 233

Query: 574 WHPLYLYGTRCLR 586
             PL     R  R
Sbjct: 234 VAPLRQAAGRNGR 246



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 96/257 (37%), Gaps = 15/257 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R++P    L   + +  +   LL        P    ++  + LD   +      T +R 
Sbjct: 2   KRLWPFAVSLAVMLALGWLATWLLGPELAPPPPLVCAEMWRLCLD-GQMFGEMGATVVRA 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+ +  + L        A         L P++  +Q+ P + +++  +++          
Sbjct: 61  LAGVAAANLLGLGLGLAAGLWPAALRALAPLVAALQACPPVVWISLAMIWAGTG------ 114

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L  + A+F + +  +  ++ Q +  + R L ++SR + +    +     +P   P  
Sbjct: 115 --SLVPMLAVFAATLPPLFLNVAQGVLALDRRLFDMSRLYDVPAATRLRRFWLPGVRPYW 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +     +++ GW     +E +          G G+ I  A +  DL+ +      ++ + 
Sbjct: 173 LAAFSQTLASGWKVAAVAEFLG------SHQGAGARIFWAYRRMDLVDLYAWTGALVLLG 226

Query: 253 FLYDQLLFRPMIVWSNK 269
            + +  L  P+   + +
Sbjct: 227 VVLEYGLVAPLRQAAGR 243


>gi|222081003|ref|YP_002540366.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221725682|gb|ACM28771.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 224

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   +   ++  ++ +P+G+ +     +    +P+   +AA P  + +PL +     
Sbjct: 34  AVTVGETLAAGLLILLVGMPIGLLLYRFGRLRLAFEPWLAAMAAAPLVLAYPLFLVLFGR 93

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L     + ++        +    I G ++      +V  SF +T  + +R I+LP   
Sbjct: 94  SSLT----IIVIGFAAGVAPVALKTIEGFASTRRVLIDVGRSFRLTPAQEFRKILLPAAL 149

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G            +  E        +   GLG  I +  E+   P     +  + 
Sbjct: 150 PQIFVGLRLGLIFCLINVVGVEFL------INLGGLGQLINDLAERYDLPGTYAAICFVV 203

Query: 564 CFVLAL 569
              +  
Sbjct: 204 LVSILF 209



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P DI   +   +    +P   + T    L+A ++ LL       L  +  RL +   P
Sbjct: 11  PLPTDIAASLWRVVVEEGIPGRFAVTVGETLAAGLLILLVGMPIGLLLYRFGRLRLAFEP 70

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L  M + P++      +V F          + L  I   F + V  +     +   +  
Sbjct: 71  WLAAMAAAPLVLAYPLFLVLFGR--------SSLTIIVIGFAAGVAPVALKTIEGFASTR 122

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R L +V RSFRL+  Q+F  + +P ++P +   + + +      VV  E +      I L
Sbjct: 123 RVLIDVGRSFRLTPAQEFRKILLPAALPQIFVGLRLGLIFCLINVVGVEFL------INL 176

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  I    +  DL     A+  ++ V  L+  +L R
Sbjct: 177 GGLGQLINDLAERYDLPGTYAAICFVVLVSILFFAILDR 215


>gi|84686260|ref|ZP_01014155.1| Binding-protein-dependent transport systems inner membrane
           component [Maritimibacter alkaliphilus HTCC2654]
 gi|84665787|gb|EAQ12262.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2654]
          Length = 270

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +  + + LR+L  + I+ L + +   L          L   + ++  +P L  L    
Sbjct: 71  LWRDTAASLLRLLGGVGIAALTSLILGMLIGLLPYARRGLSGFVAVLSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E A I  I       MT  + Q + +IP +    +++   S W   
Sbjct: 131 IVFGLG--------ETAKIVLIVIGITPFMTRDLSQRVLDIPHEQIVKAQTLGASTWVIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ N+ +S+   W F++A+E +          G+G  I L  +   +  
Sbjct: 183 ARVALPQILPRLIANVRLSLGSAWLFLIAAEAVA------SDVGLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + FL D  L
Sbjct: 237 ILTYVIWITLLAFLIDWAL 255



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 73/202 (36%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + IA++  + +G+ IG  P+    +  F  +L+  P     P++      
Sbjct: 76  AASLLRLLGGVGIAALTSLILGMLIGLLPYARRGLSGFVAVLSMVPPLALLPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L++ G   ++  ++       P++    A +   + W     + LP I 
Sbjct: 136 GET----AKIVLIVIGITPFMTRDLSQRVLDIPHEQIVKAQTLGASTWVIAARVALPQIL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +         GLG  I       +   ++  V+ + 
Sbjct: 192 PRLIANVRLSLGSAWLFLIAAEAVA------SDVGLGYRIFLVRRYLAMDVILTYVIWIT 245

Query: 564 CFVLALN---RFLWHPLYLYGT 582
                ++   R L    + +  
Sbjct: 246 LLAFLIDWALRLLTRKAFPWME 267


>gi|329946686|ref|ZP_08294098.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328526497|gb|EGF53510.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 250

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 81/237 (34%), Gaps = 15/237 (6%)

Query: 16  FPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
            P +    A +++  ++             P  +V  + + L    L   A  T    L 
Sbjct: 1   MPAVVLGAALLIIWQLVAGSGAVPEIFLPSPWAVVTRLWLNLTQAGLGWRAWITLREALL 60

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +++ +F    A    + R     ++P +   Q++P +      V++            
Sbjct: 61  GCLLAAVFALPLAWALYRWRLFSRTILPYVAASQAVPGIAVAPLMVLWIGYG-------- 112

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  +        + +T ++   L  +  D+ + +R     G     ++ +P ++P +  
Sbjct: 113 TLPIVVLCAFMVFFPITITVLLGLRGLDADVMDAARLDGAHGLSMLIHMELPMALPAVYT 172

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +    +      V  E+I+ G+      G+G+ ++      D   +   +  +  +
Sbjct: 173 GLRTGFTLSVTGAVVGELIMGGE------GLGTVLSTQQSRGDTTGVFATITLLCVL 223



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 12/229 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMFRVVVLIIIASII 400
            L I W  V    A+   +    + V    + ++    + W   IT+   ++  ++A++ 
Sbjct: 9   ALLIIWQLVAGSGAVPEIFLPSPWAVVTRLWLNLTQAGLGWRAWITLREALLGCLLAAVF 68

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+   +      S  I P+     A P     PL+V  + Y  L   +  + ++ F  
Sbjct: 69  ALPLAWALYRWRLFSRTILPYVAASQAVPGIAVAPLMVLWIGYGTLPIVVLCAFMVFF-- 126

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I   V+ G      D  + A      G     ++ LP   P   TG  T    +   
Sbjct: 127 --PITITVLLGLRGLDADVMDAARLDGAHGLSMLIHMELPMALPAVYTGLRTGFTLSVTG 184

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++V E+   G       GLG  ++    +G    V   + ++C    ++
Sbjct: 185 AVVGELIMGGE------GLGTVLSTQQSRGDTTGVFATITLLCVLATSI 227


>gi|153010300|ref|YP_001371514.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151562188|gb|ABS15685.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 523

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 71/559 (12%), Positives = 156/559 (27%), Gaps = 63/559 (11%)

Query: 16  FPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
              + + +  + V  I     L        P  ++  + I  D    P +   T     +
Sbjct: 10  LSTLRNWVILLAVWEICGRFSLIAGGALPAPSAVLARLWI--DRADYPAHILATLQGAGA 67

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             VI  L       L A       +   +   + ++P +      V+ F  + P      
Sbjct: 68  GFVIGNLVAVAAGILFALFPAAAKLGRGVNIAIFALPPIAISPILVLTFSGMTPR----- 122

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               I        +    +    +    R + ++ R++  + W+      +  ++P ++ 
Sbjct: 123 ----ITLAALGCYFITMAATMTGISQTDRRMVDIVRAYGGNRWKVLRLAQLRSALPSILA 178

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++        + +E    G   +    IGS +  A   +     L A L       L
Sbjct: 179 GLRIAAPNAVLGSILAEFGGGGRFGLGAYLIGS-LGRAEPTRLWGIGLCATLLAGLAYAL 237

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314
           +  L          K     T  I    +      R +  L FI          +   + 
Sbjct: 238 FSIL---------AKMLTGSTKAITVPANAPNTAPRDSRGLNFILVICSIALPFVLWWLL 288

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
            +      +    P            + + D  +       A      ++          
Sbjct: 289 LVFMGTPAMIAKTP------------AGLFDYLFLAPSAAPAQAKLLTALS--------- 327

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                      T+    + +    +    + I    +P I     P A +    P     
Sbjct: 328 ----------QTLPLTFLGMAAGILFAFALAIASVAKPAIVRGFMPVALVTQTMPLVA-- 375

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L    V      P++ L + +   T +     +  G +  P    +V  ++  + W   
Sbjct: 376 -LTPLLVLLLGRGPSVILWITVSV-TFFPAFVTMAQGMALVPRAALDVPRAYGASIWTQI 433

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   PY       A   A    +++E  + G      TGLG  + +S     +  
Sbjct: 434 HLVSVPASLPYLFAAIRLAVPRALLGVMIAEWLATG------TGLGNLLNQSRGYLDYGM 487

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +    ++     +   + +
Sbjct: 488 IWAVAVVSVMLSVIFYQIV 506


>gi|94309746|ref|YP_582956.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93353598|gb|ABF07687.1| Putative glycine betaine/carnitine/choline ABC transporter,
           permease component: QAT family [Cupriavidus
           metallidurans CH34]
          Length = 216

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L +        + SA+ ++++       L  + R L   ++ +  ++ ++P +   
Sbjct: 10  SWPTLLRLTGEHLALVGSAVGLAIVIGVPLGILITRHRFLAGPMLALATVVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F            L A+ A+F   +  +  + Y +L NI   ++E  R   ++ 
Sbjct: 70  GLMIPIFARFGHAL---GYLPAVTAVFLYSLLPIMRNTYTALANIDPGIQEAGRGIGMTT 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++         + +I  G       G+G  I  AI + 
Sbjct: 127 WQRMRLVDLPLAVPVILGGVRTAVVMNIGVATIAAVIGAG-------GLGVLILQAISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  +    + +  +  + D  L
Sbjct: 180 NMSKLAVGAVLVSLLAIVADACL 202



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 76/202 (37%), Gaps = 8/202 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            + +     ++ L    +  V   + +A +I +P+GI I     ++  +   A ++   P
Sbjct: 5   TYLHHSWPTLLRLTGEHLALVGSAVGLAIVIGVPLGILITRHRFLAGPMLALATVVLTLP 64

Query: 430 ANVFFPLVVSCVSYYHLNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   + +      L     +   +   I+ N     +      +E      +
Sbjct: 65  SIALFGLMIPIFARFGHALGYLPAVTAVFLYSLLPIMRNTYTALANIDPGIQEAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R + LP   P  + G  TA       + ++ V   G       GLG  I ++  
Sbjct: 125 TTWQRMRLVDLPLAVPVILGGVRTAVVMNIGVATIAAVIGAG-------GLGVLILQAIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           + +  ++ +G +++    +  +
Sbjct: 178 QSNMSKLAVGAVLVSLLAIVAD 199


>gi|320546803|ref|ZP_08041111.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus equinus ATCC 9812]
 gi|320448549|gb|EFW89284.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus equinus ATCC 9812]
          Length = 316

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 29/267 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMV 77
             ++V  +  IL+   Q+      +  + PIT       D  S    A    L      +
Sbjct: 42  LVLIVFIVAMILIFVAQKGLSTFFVDGVNPITFLFGSKWDPSSGSFGALPMILGSFIVTI 101

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTF---TVVYFMNLYP 128
           +S L     A  AA        +    +L P ++++  IP + +       +V F  L  
Sbjct: 102 LSALIATPIAIGAAVFMTEISPKYGAKILQPAIELLTGIPSVVYGFIGLQVIVPFTRLIF 161

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G      L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  +
Sbjct: 162 GGTGFGILSGVCVLFVMILPTVTFMTIDSLKAVPRHYKEASLAMGATRWQTIWRVILNAA 221

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAIK 234
            PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   ++
Sbjct: 222 RPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPSSLTTPAATLTSVLTMGIGNTVMGTVQ 281

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
              L ++   +L M     +  + + R
Sbjct: 282 NNVLWSLALVLLIMSLGFNMLVKFITR 308



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 25/217 (11%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFP 429
                   + +   +    ++  +IA+ I I   +++    P   +  +QP  +LL   P
Sbjct: 82  PSSGSFGALPMILGSFIVTILSALIATPIAIGAAVFMTEISPKYGAKILQPAIELLTGIP 141

Query: 430 ANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + V+         P                + +L +      + F  I    A P  +KE
Sbjct: 142 SVVYGFIGLQVIVPFTRLIFGGTGFGILSGVCVLFVMI-LPTVTFMTIDSLKAVPRHYKE 200

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH---------- 531
            + +   T W+    +IL    P   T  I     A+  ++  ++               
Sbjct: 201 ASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPSSLTTP 260

Query: 532 ----IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 + T G+G  +  + +      + L +LIM  
Sbjct: 261 AATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 297


>gi|306844472|ref|ZP_07477062.1| ABC transporter, permease protein [Brucella sp. BO1]
 gi|306275285|gb|EFM57035.1| ABC transporter, permease protein [Brucella sp. BO1]
          Length = 258

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANAGLIAENAAATIGEVLGGLVLGSAVGIATAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVTVLMIF---FPVVSTFFDGMRRTETSLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIHIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTVLLHGLV 243



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P D+V  +    +   + + A+ T   +L  +V+        A     S     +++
Sbjct: 42  LPGPLDVVHALVA--NAGLIAENAAATIGEVLGGLVLGSAVGIATAIGLMMSPLAQRLVM 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++   Q+IPI        ++       K+    L   F + ++         +  +   
Sbjct: 100 PVMVFSQAIPIFALAPILTLWLGYGPASKIAVTVLMIFFPVVST--------FFDGMRRT 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L + +           + + +P + P L   + ++       V A    VVG+ V  
Sbjct: 152 ETSLIDAAEILGAGRMAILFRIHIPSAFPALASGLSLA------AVYAPIGAVVGEWVGA 205

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
             G+G  + LA     +  +   +  +     L   L+    R +  W  K
Sbjct: 206 SRGLGYLMLLANGRAKVDLMFACLFVLAAFTVLLHGLVSHFARKLAAWPKK 256


>gi|20807134|ref|NP_622305.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515629|gb|AAM23909.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
          Length = 270

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 73/207 (35%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T      ++    +T+   VV   + ++  + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMLTLNQNGTLLMHIWVTLSETVVGFTLGTVAGMFIAILLWWSDFLSQVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +      P + ++L +        + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMGNGEA-PIITMALAISLIV---TIISLATGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     +LP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCVLPASVPTIMSAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VLI+      +  F+
Sbjct: 233 GQIFKLDMVMTSVLILSILSALMYVFI 259



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 17/227 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       +L  +   T    +    +  +     A L   S  L  V  P
Sbjct: 57  SQPSRMLKTMLTLNQNGTLLMHIWVTLSETVVGFTLGTVAGMFIAILLWWSDFLSQVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLATGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCVLPASVPTIMSAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
            G+G  I    +   L  ++ ++L +  +  L       L + +I W
Sbjct: 223 AGLGYLIVYGGQIFKLDMVMTSVLILSILSALMYVFIVYLEKKLIRW 269


>gi|319943601|ref|ZP_08017882.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lautropia mirabilis ATCC 51599]
 gi|319742834|gb|EFV95240.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lautropia mirabilis ATCC 51599]
          Length = 278

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 101/258 (39%), Gaps = 20/258 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------HSLPQYASRTTLRML 73
           +  +A +L+   +   L       V    ++   + L +       +L    + T  R  
Sbjct: 28  WGAIASLLLGMALWEALAAWYGPLVLPTPLETAQMLLQLMQGHGAEALWPQLAVTARRAF 87

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           + + ++L+   V    A  S    M+  P + ++   P + +L   +++F       V  
Sbjct: 88  AGLSLALVLGSVLGVAAGMSMTAAMMARPWVTVLLGTPPIAWLVLAMLWFGTGDGTPVFT 147

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +A    +F   +        Q    + +   +++ ++RL    +   L VP  +  L 
Sbjct: 148 VFIAGFPIVFAGGL--------QGARTLEKRWRDLADAYRLPWHMRILDLYVPHVLSYLF 199

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
              ++++   W  VV +E++ V D      G+G+ +A++  + D+   L  +  ++ V+ 
Sbjct: 200 PVWIVALGSAWKVVVMAELLSVSD------GVGAALAVSRAQLDMSGTLAWISAVVLVLL 253

Query: 254 LYDQLLFRPMIVWSNKFR 271
             + L+  P+      +R
Sbjct: 254 GLEYLVLEPIKREIEGWR 271



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 92/269 (34%), Gaps = 12/269 (4%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
            +   KL R        +  +     ++  +   L          + +    ++   ++ 
Sbjct: 6   RDTFMKLLRAWLGALPGYLWSGWGAIASLLLGMALWEALAAWYGPLVLPTPLETAQMLLQ 65

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    +     +T  R    + +A ++   +G+  G     +   +P+  +L   P
Sbjct: 66  LMQGHGAEALWPQLAVTARRAFAGLSLALVLGSVLGVAAGMSMTAAMMARPWVTVLLGTP 125

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHI 488
              +  L +         P     +  +F   + I+F   + GA      ++++A ++ +
Sbjct: 126 PIAWLVLAMLWFGTGDGTP-----VFTVFIAGFPIVFAGGLQGARTLEKRWRDLADAYRL 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                   + +P +  Y     I A G AW   +++E+ S       + G+GA +A S  
Sbjct: 181 PWHMRILDLYVPHVLSYLFPVWIVALGSAWKVVVMAELLS------VSDGVGAALAVSRA 234

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +      +  +  +   +L L   +  P+
Sbjct: 235 QLDMSGTLAWISAVVLVLLGLEYLVLEPI 263


>gi|297160134|gb|ADI09846.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces bingchenggensis BCW-1]
          Length = 241

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 84/254 (33%), Gaps = 21/254 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +F L   ++    I            P D+       L    L  Y   T    L+
Sbjct: 2   LPPLVFGLAVLIVWDLAIRTGAVDTFYLPAPYDLAKYFVDELLHGDLRDYTKETVWEALA 61

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              + L        L A+S      L P +   Q            V    L    +   
Sbjct: 62  GSGMGLGVALPLGYLIARSDLAASALQPYVAASQ--------AVPAVALAPLLALWLGYG 113

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L           + +  +    L ++  D+   +R   +  W   WY+ +P ++P ++ 
Sbjct: 114 LLPIAVLCALLVFFPILVNTVLGLRSLDPDVMGAARVDGVGWWGMLWYIELPLALPSILA 173

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-----LAILYAMLTML 249
            +    +      V  E ++ G+      G+G  +++  +E D        ++ A+L   
Sbjct: 174 GVRNGFTLSITGAVVGEFVMGGE------GLGQLLSVQRQEADTIGLFSTLVMLALLAAG 227

Query: 250 --GVIFLYDQLLFR 261
             GVI L ++L+ R
Sbjct: 228 FYGVIRLVERLVQR 241



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 12/226 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMFRVVVLIIIASIIWIP 403
           I W   +   A+   +    Y +  +   ++L+  +      T++  +    +   + +P
Sbjct: 13  IVWDLAIRTGAVDTFYLPAPYDLAKYFVDELLHGDLRDYTKETVWEALAGSGMGLGVALP 72

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G  I      +S +QP+     A PA    PL+   + Y  L   +  +LL+ F     
Sbjct: 73  LGYLIARSDLAASALQPYVAASQAVPAVALAPLLALWLGYGLLPIAVLCALLVFF----P 128

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL N + G  +   D    A    +  W    YI LP   P  + G       +   ++V
Sbjct: 129 ILVNTVLGLRSLDPDVMGAARVDGVGWWGMLWYIELPLALPSILAGVRNGFTLSITGAVV 188

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E    G       GLG  ++   ++     +   ++++       
Sbjct: 189 GEFVMGGE------GLGQLLSVQRQEADTIGLFSTLVMLALLAAGF 228


>gi|317132693|ref|YP_004092007.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315470672|gb|ADU27276.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 283

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  I+    I +   +L +  + T+   L   V   LF  +       S+R   +  
Sbjct: 64  WSRPSTILHTAYIQMVKGTLLRDMAYTSGSTLLGFVFGTLFGSILGLSFWWSKRYAAITE 123

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L +  ++P L      V+ F   +         + +   F   V     S Y  + ++
Sbjct: 124 PYLIVFNALPKLALAPVLVILFGIGF--------FSKVALAFLMTVVVTALSAYGGVKSV 175

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             ++E +  S   +  Q F  + VP+SMP +V ++ ++++      +  E I        
Sbjct: 176 DPEMETLLYSLGATRLQVFGKVVVPWSMPWIVSSLRINIALALAGAIVGEFIASNQ---- 231

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  +  A    D+  +   +  +  +  + 
Sbjct: 232 --GVGRMVIYAGTILDINLVWVGVFVLSILSLVM 263



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 82/248 (33%), Gaps = 25/248 (10%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDVLYVIWLGCI--------- 385
             R S    + +  +  G+AI + W+    I  ++ + +     ++    I         
Sbjct: 26  KARASKKRAVLFGRIAVGMAIVVVWEVFTRIGWMDPYYWSRPSTILHTAYIQMVKGTLLR 85

Query: 386 ----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T    ++  +  ++    +G+   +    ++  +P+  +  A P     P++V   
Sbjct: 86  DMAYTSGSTLLGFVFGTLFGSILGLSFWWSKRYAAITEPYLIVFNALPKLALAPVLVILF 145

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +       L    T      +   G  +   + + +  S   T  + +  +++P 
Sbjct: 146 GIGFFSK----VALAFLMTVVVTALSAYGGVKSVDPEMETLLYSLGATRLQVFGKVVVPW 201

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P+ V+        A   +IV E  +         G+G  +  +        V +GV +
Sbjct: 202 SMPWIVSSLRINIALALAGAIVGEFIA------SNQGVGRMVIYAGTILDINLVWVGVFV 255

Query: 562 MCCFVLAL 569
           +    L +
Sbjct: 256 LSILSLVM 263


>gi|222111853|ref|YP_002554117.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
 gi|221731297|gb|ACM34117.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax ebreus TPSY]
          Length = 263

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 98/265 (36%), Gaps = 20/265 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----- 67
           R I   ++        + +   L         P  + D +     +  L Q         
Sbjct: 9   RGIPAYLWSGWGAAASLLLFVALWELGAGLYGPLILPDPMTTFATLWGLVQSGVAWPELA 68

Query: 68  -TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T  R L+ +++++        LA  S    M+  P + ++  +P + +L   +++F   
Sbjct: 69  VTARRALAGLLLAVTVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLAMLWFGAG 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       +F +F + +  +     Q    +   L++++R++RL    +   L +P
Sbjct: 129 DGTP--------VFTVFVACLPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLTDLYLP 180

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
                L    + ++   W   V +E++   D      G+G+ +A+     D  A L  + 
Sbjct: 181 HVAAYLFPAWITALGSSWKVAVMAELLATSD------GVGAALAVTRSHLDTGASLAWIC 234

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271
            ++G + + +  L  P+     ++R
Sbjct: 235 AVVGSLLVLEYALLEPIKRELERWR 259



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 78/262 (29%), Gaps = 10/262 (3%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
                 P              +    W          I    +      +          
Sbjct: 6   RWLRGIPAYLWSGWGAAASLLLFVALWELGAGLYGPLILPDPMTTFATLWGLVQSGVAWP 65

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T  R +  +++A  +   +G+  G     S   +P+  LL   P   +  L +   
Sbjct: 66  ELAVTARRALAGLLLAVTVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLAMLWF 125

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                 P       +       +    + G     +  K++A ++ +        + LP 
Sbjct: 126 GAGDGTP----VFTVFVACLPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLTDLYLPH 181

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           +  Y     ITA G +W  ++++E+ +       + G+GA +A +         +  +  
Sbjct: 182 VAAYLFPAWITALGSSWKVAVMAELLA------TSDGVGAALAVTRSHLDTGASLAWICA 235

Query: 562 MCCFVLALNRFLWHPLYLYGTR 583
           +   +L L   L  P+     R
Sbjct: 236 VVGSLLVLEYALLEPIKRELER 257


>gi|226356352|ref|YP_002786092.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318342|gb|ACO46338.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 278

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L    + +  R+L+  +++++   +   L      L   L   L  +QSIP + F+ F
Sbjct: 74  GKLLAAIAGSLRRVLTGYLVAVVLGGLTGLLMGAWLPLRATLGAYLTGLQSIPSIAFVPF 133

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E A +F +       +  ++  +L N+P  L    R+    G  
Sbjct: 134 AILFFGLN--------ERAVLFVVILEGFIPVALAVSGALLNVPPALRIAGRTLGARGLA 185

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P S+P L+  +  + S  W  +V  E+++ G        +G  + +     ++
Sbjct: 186 LTWRVLLPASVPNLLTGLRTAWSFAWRALVGGELLIAGAKS-----LGEQLEVGRNTANV 240

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  ++ +  +  L+D LL
Sbjct: 241 ALVLSTIIIIGLIGGLFDSLL 261



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 14/230 (6%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---------IAWQSIG 365
           +L   L          +  L        ++   W+ V   + +            W  I 
Sbjct: 4   RLNPDLTRPETRGLSRWQVLSWQVSGLALILAIWWLVTDILKLYPPYVFPGPKAVWTEIS 63

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y +     QD   ++     ++ RV+   ++A ++    G+ +G    + + +  +   L
Sbjct: 64  YGLWGTGPQD-GKLLAAIAGSLRRVLTGYLVAVVLGGLTGLLMGAWLPLRATLGAYLTGL 122

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            + P+  F P  +             +  ++I      +   V       P   +    +
Sbjct: 123 QSIPSIAFVPFAILFFGL----NERAVLFVVILEGFIPVALAVSGALLNVPPALRIAGRT 178

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
               G      ++LP   P  +TG  TA   AW A +  E+   G   L 
Sbjct: 179 LGARGLALTWRVLLPASVPNLLTGLRTAWSFAWRALVGGELLIAGAKSLG 228


>gi|291485908|dbj|BAI86983.1| glycine betaine/carnitine/choline ABC transporter, membrane protein
           [Bacillus subtilis subsp. natto BEST195]
          Length = 224

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 77/205 (37%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   + Q   R  L  +  ++ + +       L A+ RRL   +  + +++Q+IP L 
Sbjct: 12  SQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQTIPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I ++F   +  +  + Y  + +I     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKFQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ A      ++ +   L+
Sbjct: 177 ATNGTAIILAGAIPTALMAVIADLV 201



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  +  Q+  YV+          V  ++ A+I+ IP+GI I     +S  +     ++  
Sbjct: 7   LGTYYSQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQT 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA     +++  +          + L +   +   I+ N   G  +  + + E   +  
Sbjct: 67  IPALAMLAVLMLVMGLGANT----VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMG 122

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T ++  R + LP      + G  TA   A   + +      G       GLG  I   +
Sbjct: 123 MTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAG-------GLGDIIVRGS 175

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   ++L   I    +  +   +
Sbjct: 176 NATNGTAIILAGAIPTALMAVIADLV 201


>gi|39933545|ref|NP_945821.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris CGA009]
 gi|39647391|emb|CAE25912.1| putative ATP-binding protein of ABC transporter [Rhodopseudomonas
           palustris CGA009]
          Length = 274

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 87/241 (36%), Gaps = 7/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L++     V     + W  VV    I         +V     QD   +      T++
Sbjct: 17  RAGLRVALPIVVLLAAIVAWDLVVRLNQIPPYVLPGPLLVASTLMQDWPVLFGSLLTTLW 76

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   + A++  I + +       +   + P+A +L   P     PL++      +L  
Sbjct: 77  TTLEGFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLI-----YLPQ 131

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              + +       + +L N   G ++   +   +   +  + W+    + LP   PY + 
Sbjct: 132 ETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASRWQTLLRLKLPAALPYILG 191

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G +   ++V+E+A+          L   IAES  + + P +   +L++    + 
Sbjct: 192 GLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALLLLSTAGIV 249

Query: 569 L 569
           +
Sbjct: 250 I 250



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 12/249 (4%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
                  R+   I  LLA ++   ++  L   I    +P  ++    +  D   L     
Sbjct: 14  FGARAGLRVALPIVVLLAAIVAWDLVVRLNQ-IPPYVLPGPLLVASTLMQDWPVLFGSLL 72

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L   V + +     A L  +SR L   L P   ++Q  P++      ++Y    
Sbjct: 73  TTLWTTLEGFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLIY---- 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +  E A I   +    + +  +    L ++ R+L  + R +  S WQ    L +P
Sbjct: 129 -----LPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASRWQTLLRLKLP 183

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  + ++        V +E+            +   IA +    ++  +  A+L
Sbjct: 184 AALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALL 241

Query: 247 TMLGVIFLY 255
            +     + 
Sbjct: 242 LLSTAGIVI 250


>gi|319637736|ref|ZP_07992502.1| ABC transporter [Neisseria mucosa C102]
 gi|317400891|gb|EFV81546.1| ABC transporter [Neisseria mucosa C102]
          Length = 265

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ ++ ++P + ++   + +F    P     
Sbjct: 81  VGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|317495855|ref|ZP_07954218.1| inner membrane binding protein [Gemella moribillum M424]
 gi|316914032|gb|EFV35515.1| inner membrane binding protein [Gemella moribillum M424]
          Length = 261

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 93/237 (39%), Gaps = 14/237 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A +L+I      L+ + +  +P  I        +   L  ++  T L  +  + + ++ 
Sbjct: 17  MAILLIIWQGAGYLNLLPKYIIPTPIEIAKAFVKNYQLLIFHSKITLLEAIIGLALGIII 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            ++ A +          + P+L + Q+IP +      V++       K        I  I
Sbjct: 77  AWMLALIMDSIPLFNKAVYPLLVLTQTIPTIAIAPILVLWLGYGLTPK--------IVLI 128

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +  + +  S+     N  +D+  + +  + S +Q  W++ +P S+      + +S+S 
Sbjct: 129 VITTTFPIVVSILDGFRNCDKDMITLLKLMKASKFQILWHVKIPTSLSYFYAGLRVSVSY 188

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +   V +E +          G+G Y+  A K  +   +   ++ +  +  L  +L+
Sbjct: 189 AFIAAVVAEWLGG------FEGLGVYMIKAKKLFEYDTMFAIIILVSVISLLSIELV 239



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 87/238 (36%), Gaps = 23/238 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYI-------------VNHFTYQDVLYVIWLGCITMFRVVVLII 395
              +    + I WQ  GY+             +     ++   +I+   IT+   ++ + 
Sbjct: 12  AATISMAILLIIWQGAGYLNLLPKYIIPTPIEIAKAFVKNYQLLIFHSKITLLEAIIGLA 71

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +  II   + + +   P  +  + P   L    P     P++V  + Y          +L
Sbjct: 72  LGIIIAWMLALIMDSIPLFNKAVYPLLVLTQTIPTIAIAPILVLWLGYGLTPK----IVL 127

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++  T + I+ +++ G      D   +      + ++   ++ +P    Y+  G   +  
Sbjct: 128 IVITTTFPIVVSILDGFRNCDKDMITLLKLMKASKFQILWHVKIPTSLSYFYAGLRVSVS 187

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            A+ A++V+E            GLG Y+ ++ +   +  +   ++++    L     +
Sbjct: 188 YAFIAAVVAEWLGGFE------GLGVYMIKAKKLFEYDTMFAIIILVSVISLLSIELV 239


>gi|56964796|ref|YP_176527.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
 gi|56911039|dbj|BAD65566.1| proline/glycine betaine ABC transporter permease [Bacillus clausii
           KSM-K16]
          Length = 220

 Score = 76.9 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 76/194 (39%), Gaps = 15/194 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   +     R  L     ++ + + +     L AK  RL   ++ + +I+Q+IP L
Sbjct: 11  VSQNSGYIAAQFYRHFLMAAYGVLFAAIVSIPLGVLIAKYGRLSGWVLAVGNIIQTIPAL 70

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G +   ++  + L P         A+  +F   +  +T + Y  +  + + L E  R+  
Sbjct: 71  G-MIAVIMLVLGLGPN-------TAVMTLFLYSILPITQNTYVGMKGVDQALVEAGRASG 122

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q    + +P ++  ++  +          +V    I      +   G+G  I    
Sbjct: 123 MTRFQLLRMVELPLAISVIMAGLR-------NALVVGIGIAAIGAFVGAGGLGEIILTGT 175

Query: 234 KEQDLLAILYAMLT 247
              D +AI+ A   
Sbjct: 176 NATDGMAIILAGAI 189



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 15/219 (6%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +  Q+  Y+              ++ A+I+ IP+G+ I     +S  +     ++   P
Sbjct: 9   TYVSQNSGYIAAQFYRHFLMAAYGVLFAAIVSIPLGVLIAKYGRLSGWVLAVGNIIQTIP 68

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A     +++  +            + +   +   I  N   G         E   +  +T
Sbjct: 69  ALGMIAVIMLVLGLGPNT----AVMTLFLYSILPITQNTYVGMKGVDQALVEAGRASGMT 124

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            ++  R + LP      + G   A       + +      G       GLG  I   T  
Sbjct: 125 RFQLLRMVELPLAISVIMAGLRNALVVGIGIAAIGAFVGAG-------GLGEIILTGTNA 177

Query: 550 GSFPEVVLG----VLIMCCFVLALNRFLWHPLYLYGTRC 584
                ++L        M      L  ++   L+ +    
Sbjct: 178 TDGMAIILAGAIPTAFMAIIADMLMGWIERKLHPFKQSK 216


>gi|296328553|ref|ZP_06871072.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154362|gb|EFG95161.1| glycine betaine/proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 513

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGAVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIITINPLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 IPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIAILALVFDFIL 199



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 14/220 (6%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
              +D  + + L    +   ++ I IAS++ I +GI I      S  I     +L   P+
Sbjct: 8   LLTEDFKFFLNLTIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGAVNILYTIPS 67

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                  ++     +    + L +  +      I+ +   G         E +     T 
Sbjct: 68  IALLGFFITITGVGNTTALIALIIYALL----PIIRSTYTGIITINPLIIEASEGMGSTK 123

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + +P   P  ++G         N   ++   +     +   GLG  I       
Sbjct: 124 LQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTN 176

Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
           +     LG L++    L  +     +   L  +     ++
Sbjct: 177 NSAMTFLGSLLIAILALVFDFILGLIEKRLTNHKRVKYKI 216


>gi|242372099|ref|ZP_04817673.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W1]
 gi|242350211|gb|EES41812.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W1]
          Length = 228

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK +RL  +++ I +++Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPVGIFIAKYKRLSWIVITIANVIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQVLRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IPVGI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPVGIFIAKYKRLSWIVITIANVIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G     ++ K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGMTGNQVL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|255655879|ref|ZP_05401288.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
 gi|296450723|ref|ZP_06892476.1| nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding
           cassette transporter, membrane protein [Clostridium
           difficile NAP08]
 gi|296879160|ref|ZP_06903155.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
 gi|296260567|gb|EFH07409.1| nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding
           cassette transporter, membrane protein [Clostridium
           difficile NAP08]
 gi|296429703|gb|EFH15555.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Clostridium difficile NAP07]
          Length = 266

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+++  ++  + +      + P DI ++         L ++   +    +  +VI  
Sbjct: 32  LIGFIVIWELLADLNVINTFLFSKPSDIYNLFIQYASSGQLFKHIGISVYETVLGLVIGT 91

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   + A     S +L  +L P L ++ ++P        +V+      G V+ A   ++ 
Sbjct: 92  VLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPIIIVWVGAGIEGIVVTAVTISVV 151

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       S Y    NI  +  ++ +SF  S  Q  + L +P +   L+    +++
Sbjct: 152 V--------TILSAYNYFMNIDEEKIKMLKSFGASKSQILFKLILPANTGNLINLTKINI 203

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
              W  V+  E +V         GIG  I    +   L  ++  +  +  
Sbjct: 204 GMAWVGVIVGEFLV------SRYGIGYLIVYGSQVFKLDLVMMGVFVLAI 247



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             Y     +     I+++  V+ ++I +++ I V I + +   +S  + PF  +L A P 
Sbjct: 64  IQYASSGQLFKHIGISVYETVLGLVIGTVLGILVAIALWWSEKLSKILDPFLVVLNALPK 123

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+++  V          + +  +  +    + +          +  ++  SF  + 
Sbjct: 124 TALAPIIIVWVGAG----IEGIVVTAVTISVVVTILSAYNYFMNIDEEKIKMLKSFGASK 179

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    +ILP      +       G AW   IV E        +   G+G  I   ++  
Sbjct: 180 SQILFKLILPANTGNLINLTKINIGMAWVGVIVGEFL------VSRYGIGYLIVYGSQVF 233

Query: 551 SFPEVVLGVLIMCC 564
               V++GV ++  
Sbjct: 234 KLDLVMMGVFVLAI 247


>gi|257887878|ref|ZP_05667531.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
 gi|257896504|ref|ZP_05676157.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
 gi|257823932|gb|EEV50864.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
 gi|257833069|gb|EEV59490.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
          Length = 219

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 23  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 83  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 135 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 187

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 188 ALPTALMAIITDWLL 202



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 17  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 77  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 133 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 185

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 186 AGALPTALMAIITDWLL 202


>gi|258647698|ref|ZP_05735167.1| ABC transporter, permease protein [Prevotella tannerae ATCC 51259]
 gi|260852532|gb|EEX72401.1| ABC transporter, permease protein [Prevotella tannerae ATCC 51259]
          Length = 260

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 79/230 (34%), Gaps = 10/230 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W      +   +         +  T      +      ++ R+ + + ++ ++ + 
Sbjct: 28  LHLLWIFGAEALRSDLLPAPWVVYQHLPTLTGEASLFHHLAESLLRLAIGLALSVLLALA 87

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             + + F       +      +   P  +  P+++      + +    L L+++F     
Sbjct: 88  GAVGMYFFKSFRYVLDGLLYFVYPIPKLILLPIIMVLCGLGNASKVTMLVLVLVF----Q 143

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++ N+    +A P  +  V  S      +  R+++LP I P   +    A G A +   V
Sbjct: 144 LMVNIRDALAAVPQRYVAVIVSLRGNRRQLLRHVLLPAIAPTLFSSVRVALGTAISVLFV 203

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +E       +    G+G  I +   +  +  +   ++++      L    
Sbjct: 204 TE------TYGTDAGVGYLIVDLWMRMDYTAMYGAIVMLALTGFLLFILF 247



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +P      SL  + + + LR+   + +S+L     A      +    VL 
Sbjct: 44  LPAPWVVYQHLPTLTGEASLFHHLAESLLRLAIGLALSVLLALAGAVGMYFFKSFRYVLD 103

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +L  +  IP L  L   +V        KV    L  +F         +  ++  +L  +
Sbjct: 104 GLLYFVYPIPKLILLPIIMVLCGLGNASKVTMLVLVLVF--------QLMVNIRDALAAV 155

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P+    V  S R +  Q   ++ +P   P L  ++ +++        A  ++ V +T   
Sbjct: 156 PQRYVAVIVSLRGNRRQLLRHVLLPAIAPTLFSSVRVALG------TAISVLFVTETYGT 209

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I       D  A+  A++ +    FL   L 
Sbjct: 210 DAGVGYLIVDLWMRMDYTAMYGAIVMLALTGFLLFILF 247


>gi|254479265|ref|ZP_05092608.1| ABC transporter, permease protein, putative [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034803|gb|EEB75534.1| ABC transporter, permease protein, putative [Carboxydibrachium
           pacificum DSM 12653]
          Length = 270

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 72/207 (34%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +    T      ++    +T+   VV   + ++  + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMLTLNQNGTLLMHIWVTLSETVVGFTLGTVAGMFIAILLWWSDFLSQVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +     N    +  + +  +    + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMG----NGEAPIITMALAISLIVTIISLATGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     +LP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCVLPASVPTIMSAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VLI+      +  F+
Sbjct: 233 GQIFKLDMVMTSVLILSILSALMYVFI 259



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       +L  +   T    +    +  +     A L   S  L  V  P
Sbjct: 57  SQPSRMLKTMLTLNQNGTLLMHIWVTLSETVVGFTLGTVAGMFIAILLWWSDFLSQVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLATGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCVLPASVPTIMSAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ ++L +  +  L    +
Sbjct: 223 AGLGYLIVYGGQIFKLDMVMTSVLILSILSALMYVFI 259


>gi|154488976|ref|ZP_02029825.1| hypothetical protein BIFADO_02285 [Bifidobacterium adolescentis
           L2-32]
 gi|154083113|gb|EDN82158.1| hypothetical protein BIFADO_02285 [Bifidobacterium adolescentis
           L2-32]
          Length = 267

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 84/245 (34%), Gaps = 15/245 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +++R  P +  ++  ++V      L H           +    +     +L      T L
Sbjct: 13  MAKRRIPTLIAVITLLVVWEAWVRLGHVPSTMIAAPSEIAQATVETWP-TLWPATEVTLL 71

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
                 + ++    +   L   SR     L P+L   Q++P++      +++F     GK
Sbjct: 72  EGTVGFLFAVTCGILIGILLYCSRIADAALFPLLSAAQTMPLISIAPLFLIWFGFEVSGK 131

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +  
Sbjct: 132 --------IVIVAVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATRAWTLWHVKLRVAAR 183

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + +S +  +     +E +          G+G ++  A        I  A L ++ 
Sbjct: 184 QIYGGIRVSAAYIFATATTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATLVIIV 237

Query: 251 VIFLY 255
           +  + 
Sbjct: 238 ITGML 242



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  + +  AW  +G++ +            T +    +     +T+    V  + A 
Sbjct: 22  IAVITLLVVWEAWVRLGHVPSTMIAAPSEIAQATVETWPTLWPATEVTLLEGTVGFLFAV 81

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +       + + P        P     PL +    +      + +++  +F
Sbjct: 82  TCGILIGILLYCSRIADAALFPLLSAAQTMPLISIAPLFLIWFGFEVSGKIVIVAVFGLF 141

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    I G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 142 ----PIAVQTIRGLEAVPQFYSDVALTCGATRAWTLWHVKLRVAARQIYGGIRVSAAYIF 197

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    L++      L
Sbjct: 198 ATATTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIVITGML 242


>gi|116332964|ref|YP_794491.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus brevis ATCC 367]
 gi|116098311|gb|ABJ63460.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Lactobacillus brevis ATCC 367]
          Length = 208

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 74/202 (36%), Gaps = 15/202 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +      +A+ + ++       L  + +     ++ +  ++Q+IP +  L   
Sbjct: 11  QLISKTGQHLYISAAALALGVIVAVPLGILLTRMKHGANFVITLAGVLQTIPAMALLAMM 70

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F              AI A+F   +  +  + Y  +  +   + + ++   ++ WQ 
Sbjct: 71  IPIFGIGSTP--------AIVALFIYSLLPILRNTYLGMQGVSPTVRDAAKGMGMTWWQM 122

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                +P + P ++  + +S +    +   +  I  G       G+G +I   +      
Sbjct: 123 MLRAEIPLAAPVIMAGIRLSATYVIAWATLASYIGAG-------GLGDFIFNGLNLYRSD 175

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
            IL   + ++ +  + D LL +
Sbjct: 176 LILGGSIPVILLALIVDYLLGK 197



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +  I+ +P+GI +    H ++ +   A +L   PA     +++        
Sbjct: 20  LYISAAALALGVIVAVPLGILLTRMKHGANFVITLAGVLQTIPAMALLAMMIPIFGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +    + +   +   IL N   G        ++ A    +T W+      +P   P  
Sbjct: 78  --STPAIVALFIYSLLPILRNTYLGMQGVSPTVRDAAKGMGMTWWQMMLRAEIPLAAPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 136 MAGIRLSATYVIAWATLASYIGAG-------GLGDFIFNGLNLYRSDLILGGSIPVILLA 188

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L ++  L         R LR
Sbjct: 189 LIVDYLLGKLETAVTPRQLR 208


>gi|296314924|ref|ZP_06864865.1| abcb protein [Neisseria polysaccharea ATCC 43768]
 gi|296838111|gb|EFH22049.1| abcb protein [Neisseria polysaccharea ATCC 43768]
          Length = 265

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSVGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 105/250 (42%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++ +L            +   V +      L ++  +     +  R +
Sbjct: 21  LWSGFAGLSVAMVVVVLWAWGSAVFGEFMLPAPVEVFQKSFDLLKHFQKNEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSVGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|224367550|ref|YP_002601713.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223690266|gb|ACN13549.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 249

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T   ++  I +A    IP+ I++   P +   + PF     A P     PL+V  + 
Sbjct: 58  ALVTFTEILAGIGLALATAIPLAIFMFAIPGLERGLTPFLVASQAIPVFALAPLLVVWLG 117

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y   +      +++ F     I  ++++G  +   +F+ +      + ++  R +  P  
Sbjct: 118 YGMASKVFMAWVIIFF----PITVSLLSGLKSCDPEFRVLFCLMGASFFQKLRMLYWPWA 173

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P + +G       A   +++ E            GLG  + ++  +     V   +L +
Sbjct: 174 LPRFFSGLRVGVTVATIGAVIGEWVG------AQQGLGYLMIQANARLQTDLVFAAILWL 227

Query: 563 CCFVLALNRFL 573
               L L   +
Sbjct: 228 TAMGLGLWILV 238



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 84/233 (36%), Gaps = 17/233 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           +G+  + + G      P DI     I   V  +  +A  T   +L+ + ++L      A 
Sbjct: 25  LGVRIMDVPGFI-LPRPSDIAATALIKAPV--IWPHALVTFTEILAGIGLALATAIPLAI 81

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
                  L   L P L   Q+IP+       VV+       K        +F  +    +
Sbjct: 82  FMFAIPGLERGLTPFLVASQAIPVFALAPLLVVWLGYGMASK--------VFMAWVIIFF 133

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T S+   L +   +   +      S +QK   L  P+++P     + + ++      V
Sbjct: 134 PITVSLLSGLKSCDPEFRVLFCLMGASFFQKLRMLYWPWALPRFFSGLRVGVT------V 187

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           A+   V+G+ V    G+G  +  A        +  A+L +  +      L+ +
Sbjct: 188 ATIGAVIGEWVGAQQGLGYLMIQANARLQTDLVFAAILWLTAMGLGLWILVGQ 240


>gi|209809281|ref|YP_002264819.1| putative binding protein-dependent transport system, membrane
           component [Aliivibrio salmonicida LFI1238]
 gi|208010843|emb|CAQ81242.1| putative binding protein-dependent transport system, membrane
           component [Aliivibrio salmonicida LFI1238]
          Length = 272

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 91/251 (36%), Gaps = 14/251 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P   S +    I      +L      +++  +    +P  +     +      L  ++  
Sbjct: 21  PMLQSVKSMIRILISAVVILGFWQFIVIVFALPSFILPNPLAVFTKLIQRYDVLLAHSWV 80

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L  + + L    ++A        L   L+PIL   Q+IP+       +++     
Sbjct: 81  TAQEILLGLGLGLSMGLLFALQMLLFDPLRRWLLPILIASQAIPVFAIAPILMLWLGYGI 140

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+ A L   F + T          Y  L N P    +++ +   S WQ   Y+ +P 
Sbjct: 141 ASKVVMAALIIFFPVTTCC--------YDGLRNTPSGYLDLAHTMGASKWQLLKYVRLPA 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P L   + +++      VVA    VVG+ V    G+G  +  A     +  +  A+  
Sbjct: 193 ALPALASGIRVAV------VVAPIGAVVGEWVGSSEGLGYLMLQANARMMIDEMFAALFI 246

Query: 248 MLGVIFLYDQL 258
           +  +      L
Sbjct: 247 LAALSVSLYFL 257



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 60/156 (38%), Gaps = 10/156 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +  +L++ F     +      G  
Sbjct: 109 LRRWLLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAALIIFF----PVTTCCYDGLR 164

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P+ + ++A +   + W+  +Y+ LP   P   +G   A   A   ++V E        
Sbjct: 165 NTPSGYLDLAHTMGASKWQLLKYVRLPAALPALASGIRVAVVVAPIGAVVGEWVG----- 219

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + GLG  + ++  +    E+   + I+    ++L
Sbjct: 220 -SSEGLGYLMLQANARMMIDEMFAALFILAALSVSL 254


>gi|253583267|ref|ZP_04860465.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Fusobacterium varium ATCC 27725]
 gi|251833839|gb|EES62402.1| glycine betaine/carnitine/choline ABC transporter opuCB
           [Fusobacterium varium ATCC 27725]
          Length = 523

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 15/164 (9%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           +    ++  ++I+Q++P +    F +              +L AI  +    +  +  + 
Sbjct: 48  KARKTILGGINIIQAVPSMALFGFLIPIIGIG--------KLPAIIIVVLYSLLPIVKNT 99

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           Y  L  I     E +    ++ +Q    + +P ++P ++  + ++       VV S  ++
Sbjct: 100 YIGLDGINPLTIEAAEGIGMTKYQILQKVQLPLALPVIMGGVRIA-------VVTSVGLM 152

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                +   G+G  +   I+  +   IL   +    +  L D L
Sbjct: 153 TIAAFVGAGGLGYLVFSGIRTINNYQILAGAIPACILALLIDYL 196



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 11/151 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             ++ A P+   F  ++  +        L   ++++  +   I+ N   G         E
Sbjct: 57  INIIQAVPSMALFGFLIPIIGIG----KLPAIIIVVLYSLLPIVKNTYIGLDGINPLTIE 112

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    +T ++  + + LP   P  + G   A   +     ++     G       GLG 
Sbjct: 113 AAEGIGMTKYQILQKVQLPLALPVIMGGVRIAVVTSVGLMTIAAFVGAG-------GLGY 165

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +       +  +++ G +  C   L ++  
Sbjct: 166 LVFSGIRTINNYQILAGAIPACILALLIDYL 196


>gi|297528985|ref|YP_003670260.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Geobacillus
           sp. C56-T3]
 gi|297252237|gb|ADI25683.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. C56-T3]
          Length = 269

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 14/227 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I+ +    L  HSL  +   T    L   +I  +   +   +     RL   L P
Sbjct: 56  SSPSAIIRLFIEKLSDHSLFVHTWATLFETLLGFLIGTVGGALIGAVLWWFPRLAKTLDP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L +  ++P +      +V     +   +    + +I              +Y +   + 
Sbjct: 116 YLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVISIIITTIV--------VYSAFQEVD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V R+F  +  Q F    +P S P ++  + +++   W  V+  E +V        
Sbjct: 168 PNYLKVLRTFGATRCQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLV------SK 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            G+G  I    +  +   +L ++L +  +  +  QL+      W ++
Sbjct: 222 QGLGYLIIYGFQVFNFTLVLMSLLIVALLSTVMYQLVAIVEKKWGSR 268



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 75/196 (38%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +      T+F  ++  +I ++    +G  + + P ++  + P+  +  A P     P++
Sbjct: 73  SLFVHTWATLFETLLGFLIGTVGGALIGAVLWWFPRLAKTLDPYLVVFNAMPKVALGPIL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     +    +  + +  +       V +       ++ +V  +F  T  + ++  
Sbjct: 133 IVALGPGFTS----IIAMGVVISIIITTIVVYSAFQEVDPNYLKVLRTFGATRCQCFKEA 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP  FP  ++      G AW   I  E        +   GLG  I    +  +F  V++
Sbjct: 189 VLPASFPAIISTLKVNVGLAWVGVITGEFL------VSKQGLGYLIIYGFQVFNFTLVLM 242

Query: 558 GVLIMCCFVLALNRFL 573
            +LI+      + + +
Sbjct: 243 SLLIVALLSTVMYQLV 258


>gi|86750445|ref|YP_486941.1| binding-protein dependent transport system inner membrane protein
           [Rhodopseudomonas palustris HaA2]
 gi|86573473|gb|ABD08030.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 265

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 19/222 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +      + +     +     IT++  ++  +I S+  + VG W   +P +++   P+ +
Sbjct: 44  VDVAAQVYAWFASGMIWKHLLITLWESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYVK 103

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +  A P  V  P+    +     +       L+ F   + +      G         + A
Sbjct: 104 MFNALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFVVFFNVY----QGVKETSATLVDNA 159

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               ++  +  R++  P    +  +   TA G A   ++V E            GLG  I
Sbjct: 160 RMLGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLG------AAAGLGYLI 213

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---------RFLWHP 576
            ++        V  G+ ++  FV+ ++           +W P
Sbjct: 214 QQAEGSFDVAGVFAGMFVLSVFVILIDLAVSMVEKRLLVWRP 255



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 79/225 (35%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+   V        + ++   T    L A VI  +   +     A+  R+  V  P +
Sbjct: 43  PVDVAAQVYAWFASGMIWKHLLITLWESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYV 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +  ++P +       ++              + +    T   + + F++YQ +      
Sbjct: 103 KMFNALPRVVLAPIFTLWLGLGI--------WSKVALGVTLVFFVVFFNVYQGVKETSAT 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L + +R   +S  Q   ++  P ++  +  ++  ++       V  E +          G
Sbjct: 155 LVDNARMLGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLGAAA------G 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
           +G  I  A    D+  +   M  +   + L D    ++ + ++VW
Sbjct: 209 LGYLIQQAEGSFDVAGVFAGMFVLSVFVILIDLAVSMVEKRLLVW 253


>gi|326391023|ref|ZP_08212572.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
 gi|325992968|gb|EGD51411.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
          Length = 270

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 71/207 (34%), Gaps = 10/207 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +           +     +T+   ++   + ++I + + I + +   +S   +P+  +L 
Sbjct: 63  LKTMIALSQNGSLFMHIWVTLSETIIGFTLGTVIGMIIAILLWWSDFLSKVAEPYLVVLN 122

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + P     P+ +  +     N    +  + +  +    + ++  G      +  ++  +F
Sbjct: 123 SLPKIALGPIFIVWMG----NGEAPIITMALAISLIVTIISLQTGFKEVDEEKIKLLKTF 178

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +     ILP   P  ++      G +W   I  E        +   GLG  I   
Sbjct: 179 GATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFL------VSKAGLGYLIVYG 232

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +      V+  VLI+      +  F+
Sbjct: 233 GQIFKLDLVMTSVLILSILSALMYIFI 259



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++  +       SL  +   T    +    +  +   + A L   S  L  V  P
Sbjct: 57  SQPSRMLKTMIALSQNGSLFMHIWVTLSETIIGFTLGTVIGMIIAILLWWSDFLSKVAEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+  N         E   I       +     S+      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWMGNG--------EAPIITMALAISLIVTIISLQTGFKEVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ ++F  +  Q      +P S+P ++  + +++   W  V+  E +V        
Sbjct: 169 EEKIKLLKTFGATKMQILTKCILPASVPTIISAIKINIGLSWVGVITGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  ++ ++L +  +  L    +
Sbjct: 223 AGLGYLIVYGGQIFKLDLVMTSVLILSILSALMYIFI 259


>gi|330821334|ref|YP_004350196.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327373329|gb|AEA64684.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 217

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 82/203 (40%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L Q   +    +  A+  ++L       L ++   L   L+    ++ ++P +   
Sbjct: 10  NWPELLQLTLQHVYLVGIAVGCAILAGVPLGILISRHEWLAPPLLGAATVILTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G      + AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPVFSRFGQGI---GAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI + 
Sbjct: 127 WQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIVRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ +L   + +  +  + D LL
Sbjct: 180 SMMKLLVGAVLVSVLAIVADLLL 202



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V+ +   +   ++ L    ++ V + +  A +  +P+GI I     ++  +   A ++  
Sbjct: 3   VHDYLAANWPELLQLTLQHVYLVGIAVGCAILAGVPLGILISRHEWLAPPLLGAATVILT 62

Query: 428 FPANVFFPLVVSCVSYYHLNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +      +     +   +   I+ N            KE     
Sbjct: 63  LPSIALFGLMIPVFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGI 122

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T W+  R + LP   P  + G  TA         ++ V   G       GLG  I  +
Sbjct: 123 GMTSWQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIVRA 175

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + S  ++++G +++    +  +  L
Sbjct: 176 IGQSSMMKLLVGAVLVSVLAIVADLLL 202


>gi|300780151|ref|ZP_07090007.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium
           genitalium ATCC 33030]
 gi|300534261|gb|EFK55320.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium
           genitalium ATCC 33030]
          Length = 257

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 97/249 (38%), Gaps = 17/249 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L  ++ +    + L G++   +P     +         +  +A+ T    L+   +S++
Sbjct: 14  FLTALIAVWEAAVRLTGVRPQILPAPSRVVTAGWEQREVIAGHAASTLGVTLAGFALSMV 73

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             +  A     S  L   L+P+L   Q+IP++      +++F      K++   L   F 
Sbjct: 74  CAWFIAIAVDFSPTLKRGLIPLLVASQTIPVIAIAPLMIIWFGFGMLPKMLVVALVTFF- 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +   + +      R+   + RS   S WQ+F  + +P ++P    ++ + ++
Sbjct: 133 -------PVAIGLIEGFDRTDREASNLLRSMGASRWQEFSLVRLPSALPSFFTSLRIGIT 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIA---LAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 + +E +          G+G Y++    A +   +LA +     +   ++L   L
Sbjct: 186 YAVTGAIFAEYVG------ARQGLGIYMSVQKNAFRTDLVLAAVAVTAVLSIALYLSTYL 239

Query: 259 LFRPMIVWS 267
           + R +I W 
Sbjct: 240 IERAVIPWH 248



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 10/186 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    ++    +      T+   +    ++ +    + I + F P +   + P       
Sbjct: 42  VVTAGWEQREVIAGHAASTLGVTLAGFALSMVCAWFIAIAVDFSPTLKRGLIPLLVASQT 101

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++    +  L   L ++L+    T + +   +I G      +   +  S  
Sbjct: 102 IPVIAIAPLMIIWFGFGMLPKMLVVALV----TFFPVAIGLIEGFDRTDREASNLLRSMG 157

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+ +  + LP   P + T        A   +I +E            GLG Y++   
Sbjct: 158 ASRWQEFSLVRLPSALPSFFTSLRIGITYAVTGAIFAEYVGARQ------GLGIYMSVQK 211

Query: 548 EKGSFP 553
                 
Sbjct: 212 NAFRTD 217


>gi|156740679|ref|YP_001430808.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156232007|gb|ABU56790.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 272

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 10/244 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              +   Q      +   L   W  +V  +A+ +        +      ++  +      
Sbjct: 21  RVRQRVAQFLPPVALLGALVGAWELLVWQLALPVWLLPTPSRILSTLMSNLPVLGEHVAA 80

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+        +A +    +G+ I   P +   + P        P     PL+V    +  
Sbjct: 81  TLSVTFPGFGLALVSGFALGVLIDASPLLRRALYPLLVTSQTIPIVAIAPLLVVGFGFG- 139

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   L++   T + I+ N   G  A   D + +  +     W+  R + LP   P 
Sbjct: 140 ---MLPKVLVVALVTFFPIVVNTADGLQAADRDQRRLLEAMGANYWQLLRLLRLPAALPS 196

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             TG   A   +   ++++E          + GLG YIA S       +V +  L     
Sbjct: 197 IFTGIKVAVTYSIIGAVLAEWIG------ASAGLGVYIARSLRAFRTDQVFVAALTTSLL 250

Query: 566 VLAL 569
            + L
Sbjct: 251 TIGL 254



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 96/259 (37%), Gaps = 20/259 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +  P +  L A V    ++   L   +     P  I+  +   L V  L ++ + T    
Sbjct: 28  QFLPPVALLGALVGAWELLVWQLALPVWLLPTPSRILSTLMSNLPV--LGEHVAATLSVT 85

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                ++L+  F    L   S  L   L P+L   Q+IPI+      VV F      KV+
Sbjct: 86  FPGFGLALVSGFALGVLIDASPLLRRALYPLLVTSQTIPIVAIAPLLVVGFGFGMLPKVL 145

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +  +    L    RD   +  +   + WQ    L +P ++P +
Sbjct: 146 VVALVTFF--------PIVVNTADGLQAADRDQRRLLEAMGANYWQLLRLLRLPAALPSI 197

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---ML 249
              + ++++      V +E I          G+G YIA +++      +  A LT   + 
Sbjct: 198 FTGIKVAVTYSIIGAVLAEWIGASA------GLGVYIARSLRAFRTDQVFVAALTTSLLT 251

Query: 250 GVIFLYDQLLFRPMIVWSN 268
             +F    LL R +I W +
Sbjct: 252 IGLFALVTLLERWIISWRD 270


>gi|134299688|ref|YP_001113184.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
 gi|134052388|gb|ABO50359.1| binding-protein-dependent transport systems inner membrane
           component [Desulfotomaculum reducens MI-1]
          Length = 268

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 96/264 (36%), Gaps = 23/264 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ------YAS 66
           RR    +     F+LV   +   +        P        +   + +L        +  
Sbjct: 19  RRRKIAVLTTQLFILVAVFVLWEISAKMHWIDPFITSQPSRMITTLKNLHYDGHLYLHLG 78

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T         +  L   + A +   S  L  V  P L ++ ++P +      +V+  N 
Sbjct: 79  ITIWETFIGFAVGTLGGILIAIMLWWSDFLNKVSEPYLVVLNALPKVALGPIIIVWLGNG 138

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P  +  A L +I             S+      + +D  ++ ++F  + +Q    + +P
Sbjct: 139 QPAIIAMALLISIVV--------TIISLLNGFLTVDQDKIKLLKTFGANKYQILCKVILP 190

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+P ++  + +++   W  V+      +G+ ++   G+G  I    +   L  ++ ++ 
Sbjct: 191 ASLPNIIAALKVNVGLSWVGVI------MGEFLVSKAGLGYLIVYGSQVFKLDLVMTSVT 244

Query: 247 TML---GVIFLYDQLLFRPMIVWS 267
            ++    V++L    L + ++ W 
Sbjct: 245 VLIVAAAVMYLAVAYLEKKLLKWQ 268



 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            ++     IT++   +   + ++  I + I + +   ++   +P+  +L A P     P+
Sbjct: 71  GHLYLHLGITIWETFIGFAVGTLGGILIAIMLWWSDFLNKVSEPYLVVLNALPKVALGPI 130

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +          +  + +  +    + +++ G      D  ++  +F    ++    
Sbjct: 131 IIVWLGNGQ----PAIIAMALLISIVVTIISLLNGFLTVDQDKIKLLKTFGANKYQILCK 186

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  +       G +W   I+ E        +   GLG  I   ++      V+
Sbjct: 187 VILPASLPNIIAALKVNVGLSWVGVIMGEFL------VSKAGLGYLIVYGSQVFKLDLVM 240

Query: 557 LGVLIMCC 564
             V ++  
Sbjct: 241 TSVTVLIV 248


>gi|158424094|ref|YP_001525386.1| ABC transporter [Azorhizobium caulinodans ORS 571]
 gi|158330983|dbj|BAF88468.1| ABC transporter [Azorhizobium caulinodans ORS 571]
          Length = 258

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             ++   V    +IA ++   +G  +   P +   ++P      A P  +F+P+ +    
Sbjct: 65  MLVSFSNVAAAAVIAIVLGFLIGAILHALPKVRGAVEPLLASYYAVPTFMFYPVFIILFG 124

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      LL I      ++   + G    P    + A    +        I LP  
Sbjct: 125 VGSGAIIAIAVLLAIVA----MITATLNGIDRIPPVLGKTARMLRMGPVERALKISLPAA 180

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY  TG   +   A+   I SE    G       G+G  IA +    +  ++   +L++
Sbjct: 181 LPYLFTGMKLSVAYAFIGVIASEFILSG------AGIGYAIAYAYNNFNNRDMYALMLLI 234

Query: 563 CCFVLALN 570
              V  +N
Sbjct: 235 ILAVTVIN 242



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 88/215 (40%), Gaps = 14/215 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   L   +  +    +   + +A VI+++  F+   +     ++   + 
Sbjct: 42  LLPPSVMAASLAEILARGTYNRDMLVSFSNVAAAAVIAIVLGFLIGAILHALPKVRGAVE 101

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+L    ++P   F    ++ F       +  A L AI A+ T+ +          +  I
Sbjct: 102 PLLASYYAVPTFMFYPVFIILFGVGSGAIIAIAVLLAIVAMITATL--------NGIDRI 153

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L + +R  R+   ++   + +P ++P L   M +S++  +  V+ASE I+ G     
Sbjct: 154 PPVLGKTARMLRMGPVERALKISLPAALPYLFTGMKLSVAYAFIGVIASEFILSGA---- 209

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             GIG  IA A    +   +   ML ++  + + +
Sbjct: 210 --GIGYAIAYAYNNFNNRDMYALMLLIILAVTVIN 242


>gi|226312298|ref|YP_002772192.1| sulfonate ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226095246|dbj|BAH43688.1| putative sulfonate ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 251

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      +M R+++  +IA II + +G +I     +   +      L + P+ V+FPL
Sbjct: 49  GQITAAIGKSMGRILLGFLIAIIIGLILGYFIWRYKLVEDTLGFVVTALQSIPSIVWFPL 108

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +          +  +  ++  G  W +  N  +G    P  ++ VA ++  TG+ + R 
Sbjct: 109 AIIWFGL----NDFSILFIVTIGATWTMTVNATSGFKNVPPLYQRVAKTYGSTGFHFVRT 164

Query: 497 IILPGIFPYYVTGAITACGGAWNA 520
           +ILP   P  ++G   A   +W A
Sbjct: 165 VILPASVPQIISGLRIAWAFSWRA 188



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 67/158 (42%), Gaps = 8/158 (5%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            + D +   L    +     ++  R+L   +I+++   +      + + +   L  ++  
Sbjct: 37  QVFDTLVNGLISGQITAAIGKSMGRILLGFLIAIIIGLILGYFIWRYKLVEDTLGFVVTA 96

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +QSIP + +    +++F           + + +F +     W MT +      N+P   +
Sbjct: 97  LQSIPSIVWFPLAIIWFGLN--------DFSILFIVTIGATWTMTVNATSGFKNVPPLYQ 148

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
            V++++  +G+     + +P S+P ++  + ++ +  W
Sbjct: 149 RVAKTYGSTGFHFVRTVILPASVPQIISGLRIAWAFSW 186


>gi|33598860|ref|NP_886503.1| ABC transporter, permease component [Bordetella parapertussis
           12822]
 gi|33603937|ref|NP_891497.1| ABC transporter, permease component [Bordetella bronchiseptica
           RB50]
 gi|33568913|emb|CAE35327.1| ABC transporter, permease component [Bordetella bronchiseptica
           RB50]
 gi|33574990|emb|CAE39656.1| ABC transporter, permease component [Bordetella parapertussis]
          Length = 285

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+  +   T    L  + + +   FV     ++SR L  V  P +    S+P + F+ 
Sbjct: 82  PRSVWPHLWLTLQATLLGLAVGVGSGFVVGLALSRSRMLADVFNPFIVAFNSMPRIAFVP 141

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   S  
Sbjct: 142 LITMFFGLGMASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGGSPR 193

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P +       +  ++S     VV +E +          G+G  +  A+   +
Sbjct: 194 QILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALATLN 247

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
              +  A+  +  V  +       L R ++ W+ +FR
Sbjct: 248 ATDMFAAVTLLSVVGIVLVYCVTWLERRLLHWAPEFR 284



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 64/200 (32%), Gaps = 13/200 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++ + +       VG+ +     ++    PF     + P   F PL+       
Sbjct: 91  LTLQATLLGLAVGVGSGFVVGLALSRSRMLADVFNPFIVAFNSMPRIAFVPLITMFFGLG 150

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +    ++ F       FN   G  +   +  +   +   +  +    + +P    
Sbjct: 151 MASKVVTSWFVVFFLVF----FNTYKGGRSVERELVDFCRTLGGSPRQILWRVRIPTAAA 206

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       A   A    +++E          TTG+G  +  +    +  ++   V ++  
Sbjct: 207 WTFAALPNAISFALIGVVLAEFVG------STTGMGYLMITALATLNATDMFAAVTLLSV 260

Query: 565 FVLALNRFL-W--HPLYLYG 581
             + L   + W    L  + 
Sbjct: 261 VGIVLVYCVTWLERRLLHWA 280


>gi|291485903|dbj|BAI86978.1| choline ABC transporter, membrane protein [Bacillus subtilis subsp.
           natto BEST195]
          Length = 226

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 71/194 (36%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L     ++ + +       L A  RRL   +  + +++Q+IP L  L   ++    
Sbjct: 23  GRHFLMSAYGVLCAAVVGVPAGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +
Sbjct: 83  G--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 135 PLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAG 187

Query: 246 LTMLGVIFLYDQLL 259
                V+ +   LL
Sbjct: 188 AIPTAVMAVGADLL 201



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+++ +P GI I     +S+ +     ++   PA     +++  +         
Sbjct: 30  AYGVLCAAVVGVPAGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   +   +   ++L 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILA 186


>gi|291558282|emb|CBL35399.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Eubacterium siraeum V10Sc8a]
          Length = 273

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V      T+ R ++  II  ++   + + +     +     P+  ++   P     P+V+
Sbjct: 69  VFSSAAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           S          +  ++L    T + +  N +AG  +   +  E+  S+  + ++ +  ++
Sbjct: 129 SITGDISSARIIIAAIL----TFYPVSTNTLAGFKSVGRERHELMRSYGASKFQLYTKML 184

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    Y+ TG   +   A  ASI+ +    G+      GLG  +++S +      V   
Sbjct: 185 IPSAISYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 559 VLIMCCFVLAL 569
           ++I    +  L
Sbjct: 239 IVIFSAVIGVL 249



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A+ T  R L   +I ++  ++ A L   S  +  +  P L I+Q IPILG     +    
Sbjct: 73  AAETLSRALIGFIIGMVLGYILALLMHLSHIVEKIAFPYLMIIQMIPILGMAPIVLSITG 132

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++   ++I A +   + + T        +      ++ R+  E+ RS+  S +Q +  + 
Sbjct: 133 DISSARIIIAAILTFYPVST--------NTLAGFKSVGRERHELMRSYGASKFQLYTKML 184

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++      + +S        +  + +  G+      G+G  ++ ++K      + + 
Sbjct: 185 IPSAISYFFTGLKISAPMAITASILVDTLQGGN------GLGCMLSQSLKGSMTRFVFWD 238

Query: 245 MLTMLGVIFLYDQLL 259
           ++    VI +    L
Sbjct: 239 IVIFSAVIGVLSFYL 253


>gi|291548881|emb|CBL25143.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ruminococcus torques L2-14]
          Length = 263

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               +   V     IT++  +V  ++ ++  I + I +     +S  + P+  +L + P 
Sbjct: 59  LKMTEDGSVFHHIGITLYETLVSFLLVTLTSILIAILLWCFHGLSEILDPYMVVLNSLPK 118

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +        +    + IFG+    + N+    S    +   +  + H   
Sbjct: 119 SALAPLLIVWLGANTTTIVVAGMSVAIFGS----ILNLYTSFSTIDQEKIRLIYTLHGKR 174

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LPG  P  ++      G      I+ E  +        +GLG  I  S++  
Sbjct: 175 RHALTKVVLPGSIPAIISNMKVNIGLCLVGVIIGEFLA------ARSGLGYLIIYSSQVF 228

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +++ + I+C     L
Sbjct: 229 KLDWLLMSICILCIIAALL 247



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I+       +  S+  +   T    L + ++  L + + A L      L  +L P
Sbjct: 49  SSPSRIITCFLKMTEDGSVFHHIGITLYETLVSFLLVTLTSILIAILLWCFHGLSEILDP 108

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            + ++ S+P        +V+        V+     AIF            ++Y S   I 
Sbjct: 109 YMVVLNSLPKSALAPLLIVWLGANTTTIVVAGMSVAIFGSI--------LNLYTSFSTID 160

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++   +  +           + +P S+P ++ NM +++      V+  E +         
Sbjct: 161 QEKIRLIYTLHGKRRHALTKVVLPGSIPAIISNMKVNIGLCLVGVIIGEFLA------AR 214

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  + +   L  +L ++  +  +  L   ++
Sbjct: 215 SGLGYLIIYSSQVFKLDWLLMSICILCIIAALLYAII 251


>gi|24379568|ref|NP_721523.1| putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|290580431|ref|YP_003484823.1| putative phosphate ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377513|gb|AAN58829.1|AE014950_12 putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|254997330|dbj|BAH87931.1| putative phosphate ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 311

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    L      ++S +    +A  AA        +    +L P+++++  IP + +   
Sbjct: 84  ALPMILGSFIVTILSAIIATPFAIGAAVFMTEISPKYGAKILQPVVELLVGIPSVVYGFI 143

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +  +++ G   G  L+ +F +F   +  +TF    SL  +PR  +E S +   
Sbjct: 144 GLQIVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTVDSLKAVPRHYKEASLAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------- 223
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    VIP             
Sbjct: 203 TRWQTIWRVILNAAKPGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATLTSV 262

Query: 224 ---GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +   ++   L ++   +L M     +  + + R
Sbjct: 263 LTMGIGNTVMGTVQNNVLWSLALVLLIMSLAFNMLMRFITR 303



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 29/226 (12%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF 433
           +L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+
Sbjct: 81  LLGALPMILGSFIVTILSAIIATPFAIGAAVFMTEISPKYGAKILQPVVELLVGIPSVVY 140

Query: 434 --------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                    P V S      + +   +++  +MI  T   + F  +    A P  +KE +
Sbjct: 141 GFIGLQIVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTVDSLKAVPRHYKEAS 197

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT------ 537
            +   T W+    +IL    P   T  +     A+  ++  ++       + T+      
Sbjct: 198 LAMGATRWQTIWRVILNAAKPGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAA 257

Query: 538 --------GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                   G+G  +  + +      + L +LIM      L RF+  
Sbjct: 258 TLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSLAFNMLMRFITR 303


>gi|29828975|ref|NP_823609.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29606080|dbj|BAC70144.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 297

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++  +I  +  +  GI +G    ++  + P+ ++L + P  V  P+ V      
Sbjct: 102 FTLHEALLGWVIGVVAGVVFGIALGRINLLADVLGPYIKVLNSIPRIVLAPIFVIWFGLG 161

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+ F       FN   GA     +    A     +  R    +++P    
Sbjct: 162 PASKVASAVVLVFFPVF----FNAFQGAREVDRNLVANARILGASDRRVTLQVVIPSATS 217

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  T    + G A   +IV E          T G+G  +A+S    +   V   ++I+  
Sbjct: 218 WIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVAQSQGTFNAAGVYAAMVILAV 271

Query: 565 FVLALNRFLWHPLYLYGTRCL 585
             L     L      +  R +
Sbjct: 272 VALVAEGLL-----TFAERRI 287



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
              + SL +    T    L   VI ++   V+     +   L  VL P + ++ SIP + 
Sbjct: 90  GTALGSLGEQIWFTLHEALLGWVIGVVAGVVFGIALGRINLLADVLGPYIKVLNSIPRIV 149

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V++F      KV  A +   F +         F+ +Q    + R+L   +R    
Sbjct: 150 LAPIFVIWFGLGPASKVASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P +   +  ++ +S        +  E I          GIG  +A +  
Sbjct: 202 SDRRVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVAQSQG 255

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +   +  AM+ +  V  + + LL    R +  W
Sbjct: 256 TFNAAGVYAAMVILAVVALVAEGLLTFAERRIFRW 290


>gi|225390072|ref|ZP_03759796.1| hypothetical protein CLOSTASPAR_03822 [Clostridium asparagiforme
           DSM 15981]
 gi|225043863|gb|EEG54109.1| hypothetical protein CLOSTASPAR_03822 [Clostridium asparagiforme
           DSM 15981]
          Length = 265

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 72/199 (36%), Gaps = 10/199 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +     +T+   VV   +   + + V + +     +S  ++PF  +L + P 
Sbjct: 64  LGMAADGSLFLHTGVTLLETVVSFALVVAVGLAVALMLWCSRSLSEILEPFLVMLNSLPK 123

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +        +    + +FG+    +  +  G S    +  ++  S   + 
Sbjct: 124 SALAPLLIVWLGNNMRTIIVAAISVALFGS----ILTLHTGFSQMDGEQVKLIYSLGGSR 179

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LPG  P  ++      G      I+ E  S         GLG  I   ++  
Sbjct: 180 RDVLLKVLLPGSLPLIISNMKVNIGLCLVGVIIGEFLS------ARAGLGYLITYGSQVF 233

Query: 551 SFPEVVLGVLIMCCFVLAL 569
           +   VV  ++++C   + L
Sbjct: 234 AMTMVVTAIVVLCLMSVVL 252



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I   +       SL  +   T L  + +  + +      A +   SR L  +L P
Sbjct: 54  SSPSMIAKCLLGMAADGSLFLHTGVTLLETVVSFALVVAVGLAVALMLWCSRSLSEILEP 113

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  N     ++ A   A+F            +++     + 
Sbjct: 114 FLVMLNSLPKSALAPLLIVWLGNNMRTIIVAAISVALFGSI--------LTLHTGFSQMD 165

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++  S   S       + +P S+P ++ NM +++      V+  E +         
Sbjct: 166 GEQVKLIYSLGGSRRDVLLKVLLPGSLPLIISNMKVNIGLCLVGVIIGEFLS------AR 219

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +   +  ++ A++ +  +  +  Q
Sbjct: 220 AGLGYLITYGSQVFAMTMVVTAIVVLCLMSVVLYQ 254


>gi|145638735|ref|ZP_01794344.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittII]
 gi|145272330|gb|EDK12238.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittII]
 gi|309750225|gb|ADO80209.1| Probable ABC transporter permease protein [Haemophilus influenzae
           R2866]
          Length = 245

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVGQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L + SR++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFSRQISAVLLPILIISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVNLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFSRQISAVLLPILIISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVNLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|229588360|ref|YP_002870479.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360226|emb|CAY47083.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 238

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPIL 104
             + I  I L    L  Y     + +L +M+ +L+       L ++   +G     + I 
Sbjct: 24  HWIGINTIELYRDDLLFYLQAHLILVLVSMLAALIVGIPAGILLSRPNMVGRAERFMQIF 83

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+   
Sbjct: 84  NIGNTVPPLAVLAIALGVLGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGS 135

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           L+E +    ++  Q  + + +P ++P ++  + ++++ 
Sbjct: 136 LKEAATGIGMTPRQVLFRVELPNAVPIIIGGVRVALAI 173



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 8/133 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           +  V+V ++ A I+ IP GI +            +Q    +    P      + +  +  
Sbjct: 46  LILVLVSMLAALIVGIPAGILLSRPNMVGRAERFMQ-IFNIGNTVPPLAVLAIALGVLGI 104

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +   +   I+ N   G        KE A+   +T  +    + LP   
Sbjct: 105 GSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAATGIGMTPRQVLFRVELPNAV 160

Query: 504 PYYVTGAITACGG 516
           P  + G   A   
Sbjct: 161 PIIIGGVRVALAI 173


>gi|192288900|ref|YP_001989505.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282649|gb|ACE99029.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 274

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 78/204 (38%), Gaps = 7/204 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V     QD   +      T++  +   + A++  I + +       +   + P+A +L
Sbjct: 54  LLVASTLMQDWPVLFGSLLTTLWTTLEGFVAAAVGGIALALLFNQSRLLEYSLFPYAVVL 113

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++      +L     + +       + +L N   G ++   +   +   
Sbjct: 114 QVTPVIAIAPLLLI-----YLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRL 168

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +  + W+    + LP   PY + G   A G +   ++V+E+A+          L   IAE
Sbjct: 169 YGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAE 226

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           S  + + P +   +L++    + +
Sbjct: 227 SGYRLNIPRMFAALLLLSTAGIVI 250



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 88/249 (35%), Gaps = 12/249 (4%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
                  R+   I  LLA ++   +I  L   I    +P  ++    +  D   L     
Sbjct: 14  FGARAGLRVALPIIVLLAAIVAWDLIVRLNQ-IPPYVLPGPLLVASTLMQDWPVLFGSLL 72

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L   V + +     A L  +SR L   L P   ++Q  P++      ++Y    
Sbjct: 73  TTLWTTLEGFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLIY---- 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +  E A I   +    + +  +    L ++ R+L  + R +  S WQ    L +P
Sbjct: 129 -----LPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASRWQTLLRLKLP 183

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  + ++        V +E+            +   IA +    ++  +  A+L
Sbjct: 184 AALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALL 241

Query: 247 TMLGVIFLY 255
            +     + 
Sbjct: 242 LLSTAGIVI 250


>gi|163795327|ref|ZP_02189294.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
 gi|159179313|gb|EDP63844.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
          Length = 292

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 9/208 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +  V      +        SL  +   T    L    I        A     +R
Sbjct: 62  VLPAAHQVFVEIWNTTVEKPITSKRSLFYHGWITLSATLLGFAIGTGLGVTLAVFIIHNR 121

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L+P +   Q+IPIL      +V    +    ++   L + +  F    + +   M
Sbjct: 122 AVDRSLMPWVVASQTIPILAIAPMIIVVLNAVGLSGLLPKALISAYLSF----FPVVVGM 177

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L +    L ++ R++  S WQ FW L  P S+P L  +M ++++      +  E+  
Sbjct: 178 VTGLRSPETQLLDLMRTYNASAWQTFWKLRWPSSVPYLFTSMKVAVAISLVGAIVGEL-- 235

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                  + G+G+ +         + I 
Sbjct: 236 ---PTGAVAGLGARLLAGSYYGQTIQIW 260



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            + + G IT+   ++   I + + + + ++I     +   + P+       P     P++
Sbjct: 87  SLFYHGWITLSATLLGFAIGTGLGVTLAVFIIHNRAVDRSLMPWVVASQTIPILAIAPMI 146

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   L+  L  +L+  + + + ++  ++ G  +      ++  +++ + W+ +  +
Sbjct: 147 IVVLNAVGLSGLLPKALISAYLSFFPVVVGMVTGLRSPETQLLDLMRTYNASAWQTFWKL 206

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 207 RWPSSVPYLFTSMKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIW 260


>gi|150024467|ref|YP_001295293.1| ABC-type phosphate-transport system, permease component PstC
           [Flavobacterium psychrophilum JIP02/86]
 gi|149771008|emb|CAL42475.1| ABC-type phosphate-transport system, permease component PstC
           [Flavobacterium psychrophilum JIP02/86]
          Length = 383

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 78/190 (41%), Gaps = 13/190 (6%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---- 92
            G   T       + VP++ +            L  L   +I++LF      LAA     
Sbjct: 128 QGADNTWSSFLTTEWVPVSDNPR---FGLIALLLGTLKVTIIAMLFAGPLGVLAALYTSA 184

Query: 93  --SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQ 146
             S++   ++ P+++++ + P  ++GF    ++  +F +++  +          A+  + 
Sbjct: 185 FASKKAKEIIKPLIELLAAFPSVVIGFFALMILATFFQDVFGYETRLNAFVGGVAMALAA 244

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +      +L  +P+   E S +   S WQ  +++ +P ++PG+   +++ +   +  
Sbjct: 245 IPIIYTISEDALSAVPKTYTEASLALGASKWQTAFFVTLPAAIPGIFAAILLGIGRVFGE 304

Query: 207 VVASEMIVVG 216
            + + M    
Sbjct: 305 TMIALMATGN 314



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV--FFP 435
              +   + + IIA +   P+G+                 I+P  +LLAAFP+ V  FF 
Sbjct: 154 IALLLGTLKVTIIAMLFAGPLGVLAALYTSAFASKKAKEIIKPLIELLAAFPSVVIGFFA 213

Query: 436 LVVSC-----VSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHIT 489
           L++       V  Y    N ++  + +      I++ +     SA P  + E + +   +
Sbjct: 214 LMILATFFQDVFGYETRLNAFVGGVAMALAAIPIIYTISEDALSAVPKTYTEASLALGAS 273

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+   ++ LP   P      +   G  +  ++++ +A+        +
Sbjct: 274 KWQTAFFVTLPAAIPGIFAAILLGIGRVFGETMIALMATGNAALNTAS 321


>gi|321312922|ref|YP_004205209.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis BSn5]
 gi|320019196|gb|ADV94182.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis BSn5]
          Length = 224

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +  ++ + +       L A+ RRL   +  + +++Q+IP L  L   ++     
Sbjct: 24  RHFLMSVYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQTIPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   L+
Sbjct: 189 IPTALMAVIADLV 201



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ A+I+ IP+GI I     +S  +     ++   PA     +++  +         
Sbjct: 30  VYGVLFAAIVGIPLGILIARYRRLSGWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA   A   + +      G       GLG  I   +   +   ++L   I    +  + 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDIIVRGSNATNGTAIILAGAIPTALMAVIA 198

Query: 571 RFL 573
             +
Sbjct: 199 DLV 201


>gi|251795657|ref|YP_003010388.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247543283|gb|ACT00302.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 210

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L  +  +  + +L  ++++L        LA+++R    +++   +I+Q  P     
Sbjct: 11  NWADLLVFTGQHIMMVLIGLLLALAVGIPLGILASRNRASARIILTAANIVQVFPS---- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +  + L            +  +F   +  +  + +  L  + + + E  +   +S 
Sbjct: 67  ----LALLVLLMVVFGLGTTTVVVGLFLYSLLPVIRNTFVGLTQVDKSIMEAGKGVGMSR 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q   ++ +P ++P ++  + ++        V +  +     ++   G+G  I   I   
Sbjct: 123 LQIMVHVQLPLALPFMLTGIRIA-------AVIAIGVATIAPLVGGDGLGREIYSGINMN 175

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           +   +    +    +  L D  L R
Sbjct: 176 NSARLYAGAIPAAILALLADFALER 200



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++   ++      +  V++ +++A  + IP+GI        +  I   A ++  FP+   
Sbjct: 10  ENWADLLVFTGQHIMMVLIGLLLALAVGIPLGILASRNRASARIILTAANIVQVFPSLA- 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              ++  +          + + +   +   ++ N   G +       E      ++  + 
Sbjct: 69  ---LLVLLMVVFGLGTTTVVVGLFLYSLLPVIRNTFVGLTQVDKSIMEAGKGVGMSRLQI 125

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             ++ LP   P+ +TG   A   A   + ++ +           GLG  I       +  
Sbjct: 126 MVHVQLPLALPFMLTGIRIAAVIAIGVATIAPLVGG-------DGLGREIYSGINMNNSA 178

Query: 554 EVVLGVLIMCCFVLALN 570
            +  G +      L  +
Sbjct: 179 RLYAGAIPAAILALLAD 195


>gi|323350797|ref|ZP_08086456.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|322122971|gb|EFX94674.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
          Length = 259

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 18  RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 76

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 77  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 131 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFY 188

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 189 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFSIIILVSVISL 242

Query: 254 L 254
           L
Sbjct: 243 L 243



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 28  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 88  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 143

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 144 PIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 203

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 204 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFSIIILVSVISLLGMKLV 248


>gi|154687505|ref|YP_001422666.1| OpuBB [Bacillus amyloliquefaciens FZB42]
 gi|154353356|gb|ABS75435.1| OpuBB [Bacillus amyloliquefaciens FZB42]
          Length = 217

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +           L A++  +L       L  + +R    ++ I++I+Q++P L  L F
Sbjct: 13  GEMLYKTWEHLYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ A+ A+F   +  +  + Y  +  + R L E  +   ++ W+
Sbjct: 73  FIPLLGVG--------KIPAVAALFFYSMLPILRNTYTGILGVNRHLLESGKGIGMTAWE 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  +  S      +   +  I  G       G+G YI + +     
Sbjct: 125 QIRLVELPLAAPVIMAGIRTSSIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQP 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+   + +  +    D +L
Sbjct: 178 EYIIAGAVPVTVLAAAVDYML 198



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ ++   +  +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +     + F +   IL N   G         E      +T W   R + LP   P  
Sbjct: 81  --KIPAVAALFFYSMLPILRNTYTGILGVNRHLLESGKGIGMTAWEQIRLVELPLAAPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSSIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIAGAVPVTVLA 191

Query: 567 LALNRFL 573
            A++  L
Sbjct: 192 AAVDYML 198


>gi|225022428|ref|ZP_03711620.1| hypothetical protein CORMATOL_02467 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944785|gb|EEG25994.1| hypothetical protein CORMATOL_02467 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 220

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 12/222 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +++   +      I      +   +V++II S++ IP+GIW               
Sbjct: 5   ALSILMDPQRWGGDSGFIMRSEQHIVLTLVVLIIGSVLAIPLGIWCAHVRPGEVIASILM 64

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               A P+     L    +    L P L L +L+       +     +G  A      E 
Sbjct: 65  NSARALPSLGLLILFGLWLGVGVLAPTLALIVLVFPS----LFIGAYSGIMAIDAGIIES 120

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +   + W+  R I +P   P  V G   A        +++   +    +    GLG Y
Sbjct: 121 ARATGHSWWQQVRKIEIPLALPLIVGGFRQAA-------LLASSTATFVAYTSDFGLGRY 173

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           I    +   +P ++ G L++       +  ++  L  +    
Sbjct: 174 IFAGLKTRDYPLMLCGSLLVILITFFFD-LIFGRLQAWTHNR 214



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 81/201 (40%), Gaps = 16/201 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +  +  L  ++I  +         A  R   ++   +++  +++P LG L    ++    
Sbjct: 27  QHIVLTLVVLIIGSVLAIPLGIWCAHVRPGEVIASILMNSARALPSLGLLILFGLWLGV- 85

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V+   LA I  +F S    +    Y  +  I   + E +R+   S WQ+   + +P
Sbjct: 86  ---GVLAPTLALIVLVFPS----LFIGAYSGIMAIDAGIIESARATGHSWWQQVRKIEIP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +V     +       ++AS             G+G YI   +K +D   +L   L
Sbjct: 139 LALPLIVGGFRQA------ALLASSTATF-VAYTSDFGLGRYIFAGLKTRDYPLMLCGSL 191

Query: 247 TMLGVIFLYDQLLFRPMIVWS 267
            ++ + F +D L+F  +  W+
Sbjct: 192 LVILITFFFD-LIFGRLQAWT 211


>gi|153007623|ref|YP_001368838.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559511|gb|ABS13009.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 258

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 77/247 (31%), Gaps = 16/247 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWL 382
           E        +R +  L      +    A+    Q   +I+            +   +   
Sbjct: 3   EALPNRSRKKRAADGLLSAAIALAIWQAVVSIGQMPRFILPGPLDVVRSLIGNAGLIAEN 62

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V+  + +   + I   I +   P     + P      A P     P++   + 
Sbjct: 63  AAATIGEVLGGLALGCAVGIATAICLMMSPLAQRLVMPAMVFSQAIPIFALAPILTLWLG 122

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y   +  + +++LMIF   + ++     G     +   + A             I +P  
Sbjct: 123 YGPAS-KIAVTVLMIF---FPVVSTFFDGMRRTDSSLIDAAEILGAGRMAILFRIRIPSA 178

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP   +G   A   A   ++V E          + GLG  +  +  +     +   + ++
Sbjct: 179 FPSLASGLSLAAVYAPIGAVVGEWVG------ASKGLGYLMLLANGRAKVDLMFACLFVL 232

Query: 563 CCFVLAL 569
             F + L
Sbjct: 233 AAFTMLL 239



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 84/266 (31%), Gaps = 17/266 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           LP    ++   +     A  L I    + +  +    +P  +  +  +  +   + + A+
Sbjct: 5   LPNRSRKKRAADGLLSAAIALAIWQAVVSIGQMPRFILPGPLDVVRSLIGNAGLIAENAA 64

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T   +L  + +        A     S     +++P +   Q+IPI        ++    
Sbjct: 65  ATIGEVLGGLALGCAVGIATAICLMMSPLAQRLVMPAMVFSQAIPIFALAPILTLWLGYG 124

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K+    L   F + ++         +  +      L + +           + + +P
Sbjct: 125 PASKIAVTVLMIFFPVVST--------FFDGMRRTDSSLIDAAEILGAGRMAILFRIRIP 176

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P L   + ++       V A    VVG+ V    G+G  + LA     +  +   + 
Sbjct: 177 SAFPSLASGLSLA------AVYAPIGAVVGEWVGASKGLGYLMLLANGRAKVDLMFACLF 230

Query: 247 TMLGVIFLY---DQLLFRPMIVWSNK 269
            +     L         R +  W  K
Sbjct: 231 VLAAFTMLLHGTVSHFARKLAAWPKK 256


>gi|293573022|ref|ZP_06683964.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E980]
 gi|291606924|gb|EFF36304.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E980]
          Length = 222

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFIVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFIV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 188

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 189 AGALPTALMAIITDWLLGILERRL 212


>gi|270260948|ref|ZP_06189221.1| transporter [Serratia odorifera 4Rx13]
 gi|270044432|gb|EFA17523.1| transporter [Serratia odorifera 4Rx13]
          Length = 403

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +L+ +V +LL       L  +SRR    +   L+I+Q++P +      +    
Sbjct: 196 LLQHLTILLATLVPALLIGVPLGVLCFRSRRWQTPIFSTLNIIQTVPSIALFGLLIAPLA 255

Query: 125 NLYPGKVIGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          AI A+    +  +  S+   L ++P  + + +R   L+ 
Sbjct: 256 GLATAVPWLAEHGVSGIGMAPAIVALVLYALLPLVRSVVAGLQSVPASVIDSARGMGLTR 315

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  + +P ++P  +  + +         V + +I  G       G G+ +   +   
Sbjct: 316 GQIFLRVQLPLALPLFLTGVRILAVQTVGMAVVAALIGAG-------GFGAIVFQGLLSS 368

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L  ++ ++ +  + D L 
Sbjct: 369 ALDLVLLGVIPVIVMAVIVDSLF 391



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 94/269 (34%), Gaps = 21/269 (7%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
              L +      +   +  ++     + ++        +  G     +  +  ++  QDV
Sbjct: 132 WLILALSLLMAADAMTRFAASHLWRILGNLLVVLPALALLFGHQLDQLSLLKEYYNRQDV 191

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                L  +T+   +  ++ A +I +P+G+         + I     ++   P+   F L
Sbjct: 192 FDAALLQHLTIL--LATLVPALLIGVPLGVLCFRSRRWQTPIFSTLNIIQTVPSIALFGL 249

Query: 437 VVSCVSYYHLNPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +++ ++                       + ++      ++ +V+AG  + P    + A 
Sbjct: 250 LIAPLAGLATAVPWLAEHGVSGIGMAPAIVALVLYALLPLVRSVVAGLQSVPASVIDSAR 309

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              +T  + +  + LP   P ++TG           ++V+ +   G       G GA + 
Sbjct: 310 GMGLTRGQIFLRVQLPLALPLFLTGVRILAVQTVGMAVVAALIGAG-------GFGAIVF 362

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +     +   V+LGV+ +    + ++   
Sbjct: 363 QGLLSSALDLVLLGVIPVIVMAVIVDSLF 391


>gi|238749872|ref|ZP_04611376.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           rohdei ATCC 43380]
 gi|238711801|gb|EEQ04015.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           rohdei ATCC 43380]
          Length = 328

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 96/252 (38%), Gaps = 22/252 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    L   +L + ++ +L  G        D + ++   ++   + + A    L++L   
Sbjct: 78  PVWRGLANILLALPVVILLATGQ------LDHLSLMKEYINRQDVFEDALWQHLQILFTT 131

Query: 77  VI-SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +I ++           +S R    +   L+I+Q+IP +      +     L       AE
Sbjct: 132 LIPAVGLGIPLGIFCFRSPRFQGAIFSTLNIIQTIPSIALFGLLIAPLAGLAAVIPWLAE 191

Query: 136 --------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                     AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ + VP 
Sbjct: 192 HGISGIGLAPAIVALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRSQLFFRVQVPI 251

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP ++  + +         V + +I  G       G+G+ +   +    L  +L  ++ 
Sbjct: 252 AMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLLGVIP 304

Query: 248 MLGVIFLYDQLL 259
           ++ +  + D L 
Sbjct: 305 VIIMAVVVDSLF 316



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   +I A  + IP+GI+    P     I     ++   P+   F L+++ ++    
Sbjct: 125 LQILFTTLIPAVGLGIPLGIFCFRSPRFQGAIFSTLNIIQTIPSIALFGLLIAPLAGLAA 184

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 185 VIPWLAEHGISGIGLAPAIVALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRSQLF 244

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 245 FRVQVPIAMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 297

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 298 VLLGVIPVIIMAVVVDSLF 316


>gi|119963289|ref|YP_948273.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter aurescens TC1]
 gi|119950148|gb|ABM09059.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Arthrobacter aurescens TC1]
          Length = 257

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 11/225 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPV 404
           + W  +      G A      +             W     T+   ++ + +A++  + +
Sbjct: 20  VIWQVLATANVAGNALPLATTVFTTLATILGTGTFWSALGATIGIALLALALAALAGVVL 79

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ IG    +        + L   P  V  PL V  +             L++FG    I
Sbjct: 80  GLLIGSFESVRYATLAVLEFLKPVPPIVILPLAVLVLG----PTAEMALFLVVFGCLLPI 135

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +   + G        ++ A S+ +        ++LP   PY  T    A   A   ++V+
Sbjct: 136 IMQTVDGVQGTDPVARDTARSYGMGEGEILARVVLPSAMPYIGTAMRVAAPAALVVTVVA 195

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +   G    ++      I ++   G +  +   V+++    L  
Sbjct: 196 GLLGGGPGLGQS------IYQAQAAGDYASLYGLVIVLGVLGLLF 234



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 83/257 (32%), Gaps = 17/257 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   +++  ++           +   +   +   L   +       T    L A+ 
Sbjct: 11  SALGIAGALVIWQVLATANVAGNALPLATTVFTTLATILGTGTFWSALGATIGIALLALA 70

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++ L   V   L      +    + +L+ ++ +P +  L   V+                
Sbjct: 71  LAALAGVVLGLLIGSFESVRYATLAVLEFLKPVPPIVILPLAVLVLGP--------TAEM 122

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+F +    +  +       +        + +RS+ +   +    + +P +MP +   M 
Sbjct: 123 ALFLVVFGCLLPIIMQTVDGVQGTDPVARDTARSYGMGEGEILARVVLPSAMPYIGTAMR 182

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY-- 255
           ++        V + ++  G  +         I  A    D  ++   ++ +  +  L+  
Sbjct: 183 VAAPAALVVTVVAGLLGGGPGLGQS------IYQAQAAGDYASLYGLVIVLGVLGLLFQG 236

Query: 256 -DQLLFRPMIVWSNKFR 271
             +L  R ++ W   +R
Sbjct: 237 ATRLAERRVLHWHESYR 253


>gi|52081949|ref|YP_080740.1| glycine betaine/carnitine/choline ABC transporter membrane protein
           [Bacillus licheniformis ATCC 14580]
 gi|52787333|ref|YP_093162.1| binding-protein-dependent transport system inner membrane protein
           OpuCD [Bacillus licheniformis ATCC 14580]
 gi|319647812|ref|ZP_08002030.1| OpuCD protein [Bacillus sp. BT1B_CT2]
 gi|52005160|gb|AAU25102.1| glycine betaine/carnitine/choline ABC transporter (membrane
           protein) [Bacillus licheniformis ATCC 14580]
 gi|52349835|gb|AAU42469.1| OpuCD [Bacillus licheniformis ATCC 14580]
 gi|317390153|gb|EFV70962.1| OpuCD protein [Bacillus sp. BT1B_CT2]
          Length = 225

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 70/193 (36%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ R++   +  I +++Q++P L  L   ++     
Sbjct: 24  RHFLMSAYGVLFAAVVGIPAGIFIARYRKISKWVFSITNVIQTVPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGMTKFQVLRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   L 
Sbjct: 189 IPTALMAIIADLF 201



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  YV+             ++ A+++ IP GI+I     IS  +     ++   PA   
Sbjct: 13  QNGGYVLGEFYRHFLMSAYGVLFAAVVGIPAGIFIARYRKISKWVFSITNVIQTVPALAM 72

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + L +   +   I+ N   G ++  + + E   +  +T ++ 
Sbjct: 73  LAVLMLVMGLGANT----VILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGMTKFQV 128

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP      + G  TA   A   + +      G       GLG  I   +   +  
Sbjct: 129 LRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAG-------GLGDIIVRGSNATNGT 181

Query: 554 EVVLG----VLIMCCFVLALNRFLWHPL 577
            ++L       +M         +L   L
Sbjct: 182 AIILAGAIPTALMAIIADLFMGWLERAL 209


>gi|261378031|ref|ZP_05982604.1| abcb protein [Neisseria cinerea ATCC 14685]
 gi|269145907|gb|EEZ72325.1| abcb protein [Neisseria cinerea ATCC 14685]
          Length = 265

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 89/196 (45%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ 
Sbjct: 187 LTGYVISSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
           ++  + L++ L+ +P+
Sbjct: 241 VIVFVSLFEYLITKPL 256


>gi|206577751|ref|YP_002237849.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Klebsiella pneumoniae 342]
 gi|288934778|ref|YP_003438837.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|206566809|gb|ACI08585.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Klebsiella pneumoniae 342]
 gi|288889487|gb|ADC57805.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 222

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 11/227 (4%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +   +  ++     +     ++      ++ V+V + +A  I +P+GI +G+    +  +
Sbjct: 3   LLLATFHWLTQPEHWLGDEGILLRLGQHLYYVLVSMAVACAIALPLGIALGYWRKGAFVV 62

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
                L  A P+     L +    +  +     L  L    +   IL N   G       
Sbjct: 63  INLFNLGRAIPSLGLILLCIIVFGFNDIPVLAALIAL----SIPPILTNTWVGIYHADRP 118

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A +  +T W+    + +P   P  + G  TA       ++V+  A  G       G
Sbjct: 119 LCDAAIALGMTPWQSLWQVRIPLAAPLILAGVRTALVQLIATAVVAAYAGLG-------G 171

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           LG ++ +   +   P+V+ G L++    +               R +
Sbjct: 172 LGRFLIDGLGQRDIPQVIGGSLVVSLLAIGGELLFARCAGRLVHRRI 218



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 81/220 (36%), Gaps = 15/220 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                  +      L    +     +    +L +M ++              R+   V++
Sbjct: 4   LLATFHWLTQPEHWLGDEGILLRLGQHLYYVLVSMAVACAIALPLGIALGYWRKGAFVVI 63

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            + ++ ++IP LG +   ++ F           ++  + A+    +  +  + +  + + 
Sbjct: 64  NLFNLGRAIPSLGLILLCIIVFGFN--------DIPVLAALIALSIPPILTNTWVGIYHA 115

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L + + +  ++ WQ  W + +P + P ++  +  ++       V +    +G     
Sbjct: 116 DRPLCDAAIALGMTPWQSLWQVRIPLAAPLILAGVRTALVQLIATAVVAAYAGLG----- 170

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             G+G ++   + ++D+  ++   L +  +    + L  R
Sbjct: 171 --GLGRFLIDGLGQRDIPQVIGGSLVVSLLAIGGELLFAR 208


>gi|220925802|ref|YP_002501104.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219950409|gb|ACL60801.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 244

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 89/233 (38%), Gaps = 14/233 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++    P  +   +        LP+    T  R+  + ++++        L  ++R    
Sbjct: 26  LRTLPSPEAVAAFLLRETQSGDLPRNVGITLWRVALSFLLAMATGAALGILLGRARMADR 85

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           +L   L ++ + P L       ++            E AAI A+  +++ N+   M +  
Sbjct: 86  LLDTPLLVLLNTPALVITVLAYIWLGL--------TETAAILAVALNKMPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L+E++++FR        ++ +P   P  V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLQEMAQAFRYDRRTWIRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G+G  I+   +  D+ A+    L    V+   D LL +P+     ++R
Sbjct: 194 --RPNGVGYAISYYFQLFDVTALFGYSLVFSAVMLAIDALLLQPLDTHVRRWR 244



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 10/204 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                +     IT++RV +  ++A      +GI +G        +     +L   PA V 
Sbjct: 43  TQSGDLPRNVGITLWRVALSFLLAMATGAALGILLGRARMADRLLDTPLLVLLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            L +       +   +  GA       +E+A +F      W
Sbjct: 103 TVLAYIWLGLTET----AAILAVALNKMPNVAVIMREGARGLDPGLQEMAQAFRYDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R+++LP + P+ V  A +    AW   +V E+        R  G+G  I+   +     
Sbjct: 159 IRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG------RPNGVGYAISYYFQLFDVT 212

Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577
            +    L+    +LA++  L  PL
Sbjct: 213 ALFGYSLVFSAVMLAIDALLLQPL 236


>gi|163790843|ref|ZP_02185268.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Carnobacterium sp. AT7]
 gi|159873911|gb|EDP67990.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Carnobacterium sp. AT7]
          Length = 211

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 71/189 (37%), Gaps = 19/189 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ + ++       L  +  +    ++ +  I+Q++P L  L   +  F           
Sbjct: 26  ALALGVIVAVPLGVLLTRFEKSAKFIIGLATILQTVPSLALLALMIPLFGVG-------- 77

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           ++ AI A+F   +  +  + Y  +  +  +L +  +   ++ +Q    + +P + P ++ 
Sbjct: 78  KVPAIVALFIYSLLPILRNTYIGMNGVDINLRDAGKGMGMTNFQMIRNVELPQAAPVIMA 137

Query: 195 NMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + +S      W  +          + I   G+G +I   +       I+   + +  + 
Sbjct: 138 GIRLSGVYVISWAAL---------ASYIGAGGLGDFIFNGLNLFIPSLIIGGTIPVTLLA 188

Query: 253 FLYDQLLFR 261
            L D  L +
Sbjct: 189 LLADFGLGK 197



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 15/186 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +  I+ +P+G+ +      +  I   A +L   P+     L++        
Sbjct: 20  LYISAFALALGVIVAVPLGVLLTRFEKSAKFIIGLATILQTVPSLALLALMIPLFGVG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G +    + ++      +T ++  R + LP   P  
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYIGMNGVDINLRDAGKGMGMTNFQMIRNVELPQAAPVI 135

Query: 507 VTGAITA--CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + G   +     +W A            ++   GLG +I           ++ G + +  
Sbjct: 136 MAGIRLSGVYVISWAAL---------ASYIGAGGLGDFIFNGLNLFIPSLIIGGTIPVTL 186

Query: 565 FVLALN 570
             L  +
Sbjct: 187 LALLAD 192


>gi|104780258|ref|YP_606756.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas entomophila L48]
 gi|95109245|emb|CAK13942.1| putative glycine betaine/carnitine/choline ABC transporter,
           permease protein [Pseudomonas entomophila L48]
          Length = 217

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 10/195 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
             LD   + Q   +    +  A+ ++++       L  +       L     ++ +IP +
Sbjct: 8   AHLDWAQVLQLTGQHITLVGIAVGLAIVVGVPLGILMTRFPVFAGPLQASATVLLTIPSI 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 + ++     G      L AI A+F   +  +  + Y +L N+   + E +R   
Sbjct: 68  ALFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPILRNTYLALTNVEPGIREAARGIG 124

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  AI
Sbjct: 125 MTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTAI 177

Query: 234 KEQDLLAILYAMLTM 248
              D+  +L   + +
Sbjct: 178 SRSDMSMLLVGAVLV 192



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F + D   V+ L    +  V + + +A ++ +P+GI +   P  +  +Q  A +L 
Sbjct: 3   LLDTFAHLDWAQVLQLTGQHITLVGIAVGLAIVVGVPLGILMTRFPVFAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   IL N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPILRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           +  +     +++G +++ 
Sbjct: 176 AISRSDMSMLLVGAVLVS 193


>gi|256028621|ref|ZP_05442455.1| glycine betaine transport system permease protein [Fusobacterium
           sp. D11]
 gi|289766539|ref|ZP_06525917.1| glycine betaine transport system permease [Fusobacterium sp. D11]
 gi|289718094|gb|EFD82106.1| glycine betaine transport system permease [Fusobacterium sp. D11]
          Length = 513

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIITINSLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 IPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIAILALVFDFIL 199



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 11/203 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
              +D  + + L    +   ++ I IAS++ I +GI I      S  I     +L   P+
Sbjct: 8   LLTEDFKFFLNLTIEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPS 67

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                  ++     +    + L +  +      I+ +   G     +   E +     T 
Sbjct: 68  IALLGFFITITGVGNTTALIALIIYALL----PIIRSTYTGIITINSLIIEASEGMGSTK 123

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + +P   P  ++G         N   ++   +     +   GLG  I       
Sbjct: 124 LQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTN 176

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
           +     LG L++    L  +  L
Sbjct: 177 NSAMTFLGSLLIAILALVFDFIL 199


>gi|261401023|ref|ZP_05987148.1| abcb protein [Neisseria lactamica ATCC 23970]
 gi|269209026|gb|EEZ75481.1| abcb protein [Neisseria lactamica ATCC 23970]
          Length = 265

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGGFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ ++ ++P + ++   + +F    P     
Sbjct: 81  VGISVALVAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|332365063|gb|EGJ42828.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK355]
          Length = 250

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 19  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 79  ILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 134

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 135 PIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 194

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 195 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 239



 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 9   RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLVLGVILACILAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 233

Query: 254 L 254
           L
Sbjct: 234 L 234


>gi|332669950|ref|YP_004452958.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
 gi|332338988|gb|AEE45571.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
          Length = 268

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 14/234 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIII 396
           V ++  +    V    A   A              D++    LG    +++ R  V   +
Sbjct: 14  VPWLGVVVVLAVWSLAAGAGARGLPAPWAVAAAGADLVVAGTLGPALGVSLVRFAVGAGV 73

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             +  + +G+  G    +   +    Q+L A P     PL V           + +++  
Sbjct: 74  GVLAGLVLGLAAGTWRLVDVLVDRPVQMLRAVPLTALVPLAVVWFGVGETAKVVLVAVGA 133

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                        A          + A +  ++      +++LPG  P  + G     G 
Sbjct: 134 AVPVY----VATCAAVREVDPFLVDAARTCGLSRRSVAVHVLLPGAVPGALVGVRYGLGV 189

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            W A +V+E            G+GA +  + E      +++ V +      A +
Sbjct: 190 GWVALVVAE-------TTGAEGVGALLTAAREYARVDVMLVCVALYAVLGAATD 236



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 89/245 (36%), Gaps = 17/245 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R +      ++  + V  +      G +    P  +       +   +L      + +R
Sbjct: 9   ARELLVPWLGVVVVLAVWSLAA--GAGARGLPAPWAVAAAGADLVVAGTLGPALGVSLVR 66

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                 + +L   V    A   R + +++   + +++++P+   +   VV+F      KV
Sbjct: 67  FAVGAGVGVLAGLVLGLAAGTWRLVDVLVDRPVQMLRAVPLTALVPLAVVWFGVGETAKV 126

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   + A   ++ +           ++  +   L + +R+  LS      ++ +P ++PG
Sbjct: 127 VLVAVGAAVPVYVATC--------AAVREVDPFLVDAARTCGLSRRSVAVHVLLPGAVPG 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            +  +   +  GW  +V +E            G+G+ +  A +   +  +L  +     +
Sbjct: 179 ALVGVRYGLGVGWVALVVAE-------TTGAEGVGALLTAAREYARVDVMLVCVALYAVL 231

Query: 252 IFLYD 256
               D
Sbjct: 232 GAATD 236


>gi|300814376|ref|ZP_07094647.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511484|gb|EFK38713.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 215

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L     ++ + + +     + A+  +L   L+ + +I+++IP L  L   +     
Sbjct: 20  IRHFLISFYGVLFASILSIPLGFIIARKVKLSDFLIGVANILETIPSLAMLAILMFAIGT 79

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +FA+F   +  +  +    + +IP    + ++   ++  Q+   + +
Sbjct: 80  G--------PNTVVFAVFLYAILPILKNTVVGITSIPEKYIDAAKGMGMTSGQRILKVEI 131

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P SM  ++  +          +V +  +    T I   G+G  I+  I   +  AI+ A 
Sbjct: 132 PLSMAIIMGGIR-------NALVLAIGVTAVGTFIGAGGLGDIISRGINVANGGAIIIAG 184

Query: 246 LTMLGVIFLYDQLLF 260
                ++ +    + 
Sbjct: 185 AVPTALMAVVSDFVL 199



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 71/201 (35%), Gaps = 11/201 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
            Q+  Y+              ++ ASI+ IP+G  I  +  +S  +   A +L   P+  
Sbjct: 9   LQNSSYIFEQFIRHFLISFYGVLFASILSIPLGFIIARKVKLSDFLIGVANILETIPSLA 68

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              +++  +          +   +       IL N + G ++ P  + + A    +T  +
Sbjct: 69  MLAILMFAIGTGPNT----VVFAVFLYAILPILKNTVVGITSIPEKYIDAAKGMGMTSGQ 124

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P      + G         NA +++   +     +   GLG  I+      + 
Sbjct: 125 RILKVEIPLSMAIIMGGIR-------NALVLAIGVTAVGTFIGAGGLGDIISRGINVANG 177

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             +++   +    +  ++ F+
Sbjct: 178 GAIIIAGAVPTALMAVVSDFV 198


>gi|260888767|ref|ZP_05900030.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Selenomonas sputigena
           ATCC 35185]
 gi|330839839|ref|YP_004414419.1| ABC-type glycine betaine transport, periplasmic subunit
           [Selenomonas sputigena ATCC 35185]
 gi|260861520|gb|EEX76020.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Selenomonas sputigena
           ATCC 35185]
 gi|329747603|gb|AEC00960.1| ABC-type glycine betaine transport, periplasmic subunit
           [Selenomonas sputigena ATCC 35185]
          Length = 516

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+V++++       L A+  R+    + +++ + +IP +         F  L P   I
Sbjct: 28  LVAIVLAIVIGGAMGILIAEVDRMAQPTLLVVNFLYTIPSIA-------MFGFLLPFSGI 80

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G    AI A+    +  M  + +  L N+   L E +     + +Q    + +P +MP +
Sbjct: 81  G-NTTAIIALTLYALLPMVKNTHTGLKNVDPLLIEAAVGMGSTRFQVLRRIALPLAMPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +             +  +    + I   G+G  I   I   +        L +  + 
Sbjct: 140 LAGIR-------NMTTMTIALAGIASFIGAGGLGIAIYRGITTNNAALAFDGSLLIACLA 192

Query: 253 FLYDQLLFR 261
            L D +L R
Sbjct: 193 LLADTVLAR 201



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 11/174 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    +   +V I++A +I   +GI I     ++         L   P+   F  +
Sbjct: 15  FFLQLTLEHIAIALVAIVLAIVIGGAMGILIAEVDRMAQPTLLVVNFLYTIPSIAMFGFL 74

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + L+L  +      ++ N   G         E A     T ++  R I
Sbjct: 75  LPFSGIGNTTAIIALTLYALL----PMVKNTHTGLKNVDPLLIEAAVGMGSTRFQVLRRI 130

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            LP   P  + G         N + ++   +     +   GLG  I       +
Sbjct: 131 ALPLAMPVILAGIR-------NMTTMTIALAGIASFIGAGGLGIAIYRGITTNN 177


>gi|163757344|ref|ZP_02164433.1| putative transmembrane component of ABC transporter [Hoeflea
           phototrophica DFL-43]
 gi|162284846|gb|EDQ35128.1| putative transmembrane component of ABC transporter [Hoeflea
           phototrophica DFL-43]
          Length = 262

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 85/246 (34%), Gaps = 15/246 (6%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            L + LP    RR+ P I  + A +    +  +   GI    +P     I  I  +   L
Sbjct: 3   RLLSRLPAARFRRVLPAILSVAALLAAWEV-YVRASGILALVLPAPSRVIGQIVANREIL 61

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 T    L+    SL   F  + L     RL   L P+  I Q++P++      V+
Sbjct: 62  WANTLPTLTATLTGFACSLSVAFALSVLIDFIPRLRRALFPVFVISQTLPLVAIAPLVVL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F      K++   L   F         M  ++     +  RD+  +  S   S    F 
Sbjct: 122 WFGFGLTPKILLVALVTFF--------PMLIALVDGYHSTDRDISALLASMGASRATIFR 173

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
              +P + P     + +S++      + +E +          G+G  I  A        +
Sbjct: 174 RARLPSATPYFFAGLRISITYAVVAAIFAEYVG------ARAGLGIVILNAKNSFRPDLM 227

Query: 242 LYAMLT 247
           L A++ 
Sbjct: 228 LAAVVI 233



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 10/169 (5%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
               +  +   + + I F P +   + P   +    P     PLVV    +         
Sbjct: 75  GFACSLSVAFALSVLIDFIPRLRRALFPVFVISQTLPLVAIAPLVVLWFGFGLTPK---- 130

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            LL+   T + +L  ++ G  +   D   + +S   +    +R   LP   PY+  G   
Sbjct: 131 ILLVALVTFFPMLIALVDGYHSTDRDISALLASMGASRATIFRRARLPSATPYFFAGLRI 190

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           +   A  A+I +E            GLG  I  +        ++  V+I
Sbjct: 191 SITYAVVAAIFAEYVG------ARAGLGIVILNAKNSFRPDLMLAAVVI 233


>gi|149203754|ref|ZP_01880723.1| ABC transporter, permease protein [Roseovarius sp. TM1035]
 gi|149142871|gb|EDM30913.1| ABC transporter, permease protein [Roseovarius sp. TM1035]
          Length = 247

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 90/243 (37%), Gaps = 14/243 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  LV+    + L  +    +P        +      +  +A+ T   +L  + +  +  
Sbjct: 12  ALALVLWQALVTLAALPPFILPGPARVAETLWASRALIAHHATITAAEVLIGLALGAILG 71

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A S     ++ PI+   Q+IP+        ++       KV  A L   F   
Sbjct: 72  GLSAIGLASSPMARRLIRPIMVFSQAIPVFALAPILTLWLGYGLWSKVAMALLIIYF--- 128

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T + + +L   P    +++R    +  +  W++ VP ++PG    + ++    
Sbjct: 129 -----PVTSAFFDALMRTPPQWLDLARVMGANRARLMWHIRVPAALPGFASGLRLA---- 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              V A    ++G+ V    G+G  + LA     +  +  A++ +  +  L    + R  
Sbjct: 180 --AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKIDLMFAALIVLAILTLLLHAGVDRGC 237

Query: 264 IVW 266
             W
Sbjct: 238 RKW 240



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 77/237 (32%), Gaps = 10/237 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L +    + +  + W  +V   A+          V    +     +     IT   V++
Sbjct: 3   RLVTIASSTALALVLWQALVTLAALPPFILPGPARVAETLWASRALIAHHATITAAEVLI 62

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            + + +I+     I +   P     I+P      A P     P++   + Y   +     
Sbjct: 63  GLALGAILGGLSAIGLASSPMARRLIRPIMVFSQAIPVFALAPILTLWLGYGLWSKVAMA 122

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L++ F     +           P  + ++A        R   +I +P   P + +G   
Sbjct: 123 LLIIYF----PVTSAFFDALMRTPPQWLDLARVMGANRARLMWHIRVPAALPGFASGLRL 178

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   A   +I+ E          + GLG  +  +  +     +   ++++    L L
Sbjct: 179 AAVYAPIGAIIGEWVG------ASKGLGYLMLLANGRAKIDLMFAALIVLAILTLLL 229


>gi|86361122|ref|YP_473009.1| glycine betaine/L-proline ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86285224|gb|ABC94282.1| probable glycine betaine/L-proline ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 283

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 95/256 (37%), Gaps = 22/256 (8%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +  +L    +  +F   + L+A V+V+    + L       +      +V        L 
Sbjct: 36  VETVLSAIEAALLFVPPYALIAIVVVLAFFAVGLRAAILAGLCLGFCLLV-------GLW 88

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             + +T   +  A+VIS+L  F    L ++ + L   + P+LD+MQ++P   +L   V+ 
Sbjct: 89  TASMQTLALVTVAVVISVLIAFPIGVLCSRYKALEAAVRPVLDVMQTVPPWVYLIPAVMI 148

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F            + AI A     +  M      +   +P+   E+  +         W 
Sbjct: 149 FSLG--------RVPAIIATIVYGIPPMLRLTTLAFNQVPKVFIELGSAIGAPPRSILWK 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   L+  +   +      VV + ++  G            +   +   ++   L
Sbjct: 201 IEMPLAKQTLLVGLNQCILLSLAMVVLAGLVGAGGLGAE-------VTRGLTRMEMGLGL 253

Query: 243 YAMLTMLGVIFLYDQL 258
            A L ++ V  L D+L
Sbjct: 254 RAGLAIVAVALLLDRL 269



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 66/213 (30%), Gaps = 4/213 (1%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           + +S   F +P  + +      L     +  E  L       +          VV     
Sbjct: 6   LQFSPGAFLAPSVDWLNTNLHPLFAAISYVVETVLSAIEAALLFVPPYALIAIVVVLAFF 65

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +  ++         +  ++ +      T+  V V ++I+ +I  P+G+       + + 
Sbjct: 66  AVGLRAAILAGLCLGFCLLVGLWTASMQTLALVTVAVVISVLIAFPIGVLCSRYKALEAA 125

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           ++P   ++   P  V+    V   S   +   +   +  I      +L       +  P 
Sbjct: 126 VRPVLDVMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGI----PPMLRLTTLAFNQVPK 181

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            F E+ S+           I +P      + G 
Sbjct: 182 VFIELGSAIGAPPRSILWKIEMPLAKQTLLVGL 214


>gi|163839893|ref|YP_001624298.1| glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162953369|gb|ABY22884.1| Glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 269

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 10/212 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q I ++ +   +Q    +       +    + I +A II IP+G+++G        I   
Sbjct: 28  QGIQWLFDAQNWQGANGIPLRLVEHLGYSALTIGLALIIAIPIGLYVGHTGRGKVIIVSL 87

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A +L A P      L     S   L P +W  +L+       IL  V AG S+   D  +
Sbjct: 88  AGMLRALPTLGLVILFALLTSPLALMPPIWALVLL---AIPPILTGVYAGISSVDPDIVD 144

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S  ++  +    + +P        G     GG     +          +L   GLG 
Sbjct: 145 AARSMGMSEAQVLFRVEVP-------NGLKVMLGGFRGCVLQVIATVAVVAYLPQGGLGR 197

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +I    +   +  V  G +++    + L+  L
Sbjct: 198 FIVTGLKSYDYGSVFGGAVVIAVLAIVLDGVL 229



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 82/202 (40%), Gaps = 18/202 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L ++   + L     + ++L+           + R  +++V +  +++++P LG + 
Sbjct: 46  PLRLVEHLGYSAL----TIGLALIIAIPIGLYVGHTGRGKVIIVSLAGMLRALPTLGLVI 101

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +            A +  I+A+    +  +   +Y  + ++  D+ + +RS  +S  
Sbjct: 102 LFALL-------TSPLALMPPIWALVLLAIPPILTGVYAGISSVDPDIVDAARSMGMSEA 154

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + VP  +  ++        G    V+A+  +V     +P  G+G +I   +K  D
Sbjct: 155 QVLFRVEVPNGLKVMLGGFR----GCVLQVIATVAVVA---YLPQGGLGRFIVTGLKSYD 207

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
             ++    + +  +  + D +L
Sbjct: 208 YGSVFGGAVVIAVLAIVLDGVL 229


>gi|157149960|ref|YP_001451349.1| permease protein SP2198 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074754|gb|ABV09437.1| ABC transporter, permease protein SP2198 [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 247

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  II   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 58  ATLKVALLGLLLGVIIACLLAVLMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   +        W+   +  +P   P
Sbjct: 118 ----ILPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +   ++++  
Sbjct: 174 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIVLVSV 227

Query: 565 FVLALNRFL 573
             L   + +
Sbjct: 228 ISLLGMKLV 236



 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 103/260 (39%), Gaps = 20/260 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++  ++  + +  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 6   RQQISLLGMVGVLAIWQVMGWLKL-LPKFILPTPLEICQAFVRDAELLAIHSWATLKVAL 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 65  LGLLLGVIIACLLAVLMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 119 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASLPYFY 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      + +A++ ++ VI 
Sbjct: 177 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTM-FAIIVLVSVI- 228

Query: 254 LYDQLLFRPMIVWSNKFRLE 273
               LL   ++  S KF ++
Sbjct: 229 ---SLLGMKLVAISEKFVIK 245


>gi|16080423|ref|NP_391250.1| choline ABC transporter permease [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311320|ref|ZP_03593167.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315647|ref|ZP_03597452.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320563|ref|ZP_03601857.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324847|ref|ZP_03606141.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7404421|sp|P39775|OPUBD_BACSU RecName: Full=Choline transport system permease protein opuBD
 gi|2293450|gb|AAC14359.1| transmembrane protein [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|2635883|emb|CAB15375.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 226

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 71/194 (36%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L     ++ + +       L A  RRL   +  + +++Q+IP L  L   ++    
Sbjct: 23  GRHFLMSAYGVLFAAVVGVPAGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +
Sbjct: 83  G--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 135 PLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAG 187

Query: 246 LTMLGVIFLYDQLL 259
                V+ +   LL
Sbjct: 188 AIPTAVMAVGADLL 201



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+++ +P GI I     +S+ +     ++   PA     +++  +         
Sbjct: 30  AYGVLFAAVVGVPAGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G  +  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   +   +   ++L 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILA 186


>gi|329925927|ref|ZP_08280637.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328939578|gb|EGG35927.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 293

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 85/252 (33%), Gaps = 12/252 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--L 377
           L         +   +     V+ ++ + W        +   + S    +   T+  +   
Sbjct: 34  LDEEGLERRRSQRIVWGRAAVAVLVFLVWEVFTRIGLLDSYYWSSPSAILRTTWTQITEG 93

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T    ++  +  + +   +G+   +    +   +P+  +L A P     P++
Sbjct: 94  TLLRDITYTSGSTILGFVFGTFLGALLGLSFWWSKSYAGISEPYLIILNALPKLALAPVL 153

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +     +       + +  +      +  +G  +   D +++  S      + +  +
Sbjct: 154 VILLGIGFFSKVALAFSMTVVVSA----LSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKV 209

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P+ ++        A   +IV E  +       + G+G  I  +        V +
Sbjct: 210 VVPWSMPWIISSLRINIALALAGAIVGEFIA------SSQGVGRMIMYAGTILDINLVWV 263

Query: 558 GVLIMCCFVLAL 569
           GV+++    + +
Sbjct: 264 GVVVLSLLSMVM 275



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 89/252 (35%), Gaps = 19/252 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLPQ 63
               RR    ++   A  +++ ++  +   I        + P  I+      +   +L +
Sbjct: 38  GLERRRSQRIVWGRAAVAVLVFLVWEVFTRIGLLDSYYWSSPSAILRTTWTQITEGTLLR 97

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + T+   +   V       +       S+    +  P L I+ ++P L      V+  
Sbjct: 98  DITYTSGSTILGFVFGTFLGALLGLSFWWSKSYAGISEPYLIILNALPKLALAPVLVILL 157

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +         + +   F+  V     S Y  + ++  D+E++  S      Q F  +
Sbjct: 158 GIGF--------FSKVALAFSMTVVVSALSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKV 209

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP+SMP ++ ++ ++++      +  E I          G+G  I  A    D+  +  
Sbjct: 210 VVPWSMPWIISSLRINIALALAGAIVGEFIASSQ------GVGRMIMYAGTILDINLVWV 263

Query: 244 AMLTMLGVIFLY 255
            ++ +  +  + 
Sbjct: 264 GVVVLSLLSMVM 275


>gi|327191934|gb|EGE58918.1| putative nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CNPAF512]
          Length = 309

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+           GI
Sbjct: 205 LDLMRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGATA-----GI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 293



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N                  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +       T G+G+ 
Sbjct: 208 MRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----TAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTIDIWAALVAGSLLAGIL 289


>gi|70728252|ref|YP_258001.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas fluorescens Pf-5]
 gi|68342551|gb|AAY90157.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 217

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ ++++F      L  +   L   L     ++ +IP + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAIVFGVPLGVLMTRFPTLAGPLQASATVLLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      L AI A+F   +  +  + Y +L  +   + E +R   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +    D LL
Sbjct: 179 RSDMSMLIVGAVLVSLLAIFADLLL 203



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A +  +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAIVFGVPLGVLMTRFPTLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  IPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSLLAIFADLLL 203


>gi|325262455|ref|ZP_08129192.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           protein, permease components [Clostridium sp. D5]
 gi|324032287|gb|EGB93565.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           protein, permease components [Clostridium sp. D5]
          Length = 265

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 75/195 (38%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T++  +V  ++ ++I + + + +     +S  + P+  +L + P +   PL++
Sbjct: 70  IFVHIWTTLYETIVSFLLVTLISVMLAVALWCSKKLSEIMDPYLVVLNSLPKSALAPLLI 129

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +        +    + IFG+    + N+    +    +  ++  +     W     ++
Sbjct: 130 VWLGATKTTIIVAGMSVAIFGS----ILNLYTSFTTVDEEKIKLIYTLRGNKWHALTKVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  ++      G      I+ E  +         GLG  I  S++      +++ 
Sbjct: 186 LPSSIPAIISNMKVNIGLCLVGVIIGEFLA------ARNGLGYLIIYSSQVFKMDWLLMS 239

Query: 559 VLIMCCFVLALNRFL 573
           ++++C   + L   +
Sbjct: 240 IVLLCIMAMGLYALI 254



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 77/196 (39%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + ++  L + + A     S++L  ++ P L ++ S+P        +V+ 
Sbjct: 73  HIWTTLYETIVSFLLVTLISVMLAVALWCSKKLSEIMDPYLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y S   +  +  ++  + R + W     +
Sbjct: 133 GATKTTIIVAGMSVAIFGSI--------LNLYTSFTTVDEEKIKLIYTLRGNKWHALTKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +   +      G+G  I  + +   +  +L 
Sbjct: 185 VLPSSIPAIISNMKVNIGLCLVGVIIGEFLAARN------GLGYLIIYSSQVFKMDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +      L+
Sbjct: 239 SIVLLCIMAMGLYALI 254


>gi|293556905|ref|ZP_06675466.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1039]
 gi|291600989|gb|EFF31280.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1039]
          Length = 223

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 29  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 89  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 141 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 193

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 194 ALPTALMAIITDWLL 208



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 23  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 83  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 139 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 191

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 192 AGALPTALMAIITDWLLGILERRL 215


>gi|81428232|ref|YP_395232.1| putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78609874|emb|CAI54921.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 208

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+++  L          +  +   V++ I  ++Q++P L  L   +             
Sbjct: 25  IALLLGALVAVPLGIALTRVPKTAKVVIAIASMLQTVPSLALLALMIPLLGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ AI A+F   +  +  + Y  + ++   L++ ++   ++  Q    + VP +MP ++
Sbjct: 78  -KVPAIVALFIYSLLPILRNTYIGMNDVDPVLKDSAKGMGMTPLQSIMQVEVPMAMPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +   +  I  G       G+G +I   +       I+   + +  +  
Sbjct: 137 SGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLFKPDLIIGGTIPVTILAL 189

Query: 254 LYDQLLFR 261
           L D LL R
Sbjct: 190 LVDFLLGR 197



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 68/189 (35%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + +++ +++ +P+GI +   P  +  +   A +L   P+     L++  +     
Sbjct: 20  LYISAIALLLGALVAVPLGIALTRVPKTAKVVIAIASMLQTVPSLALLALMIPLLGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G +      K+ A    +T  +    + +P   P  
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYIGMNDVDPVLKDSAKGMGMTPLQSIMQVEVPMAMPVI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 136 MSGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLFKPDLIIGGTIPVTILA 188

Query: 567 LALNRFLWH 575
           L ++  L  
Sbjct: 189 LLVDFLLGR 197


>gi|328544710|ref|YP_004304819.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326414452|gb|ADZ71515.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 255

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 81/246 (32%), Gaps = 14/246 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITM 387
           +     +   ++  +  F V         +           +         +      T+
Sbjct: 1   MNERWIKAAPWLWSVGLFVVWEAAVAVFDFPVYILPAPTDIWAAIVKYWSPIWKNSLQTL 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           F  ++  ++A +  + +G+ IG+   I + + P      + P     P++V         
Sbjct: 61  FTTLIGFLLAVVGGLLLGLAIGWSRAIYAGLYPLMIGFNSVPKVAVVPILVIWFGIG--- 117

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +   L       + I+ NV  G +    + ++V  +           + +P   PY+ 
Sbjct: 118 -TIPAVLTAFLIAFFPIVVNVATGLATMEPEMEDVLRALGAKKLDIMLKVGIPRSMPYFF 176

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                A   A+  S++SE  +         G+G  +  +  + + P V  G++ +    +
Sbjct: 177 GSLKVAITLAFVGSVISETVA------ANAGIGHMMLAAQSQFNVPLVWAGLVALAVLGI 230

Query: 568 ALNRFL 573
            +   +
Sbjct: 231 VMYVLM 236



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 101/265 (38%), Gaps = 19/265 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P ++ +  FV+    + +    +     P DI   +        + + + +T    L
Sbjct: 7   KAAPWLWSVGLFVVWEAAVAVFDFPVYILPAPTDIWAAIVKYWSP--IWKNSLQTLFTTL 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              +++++   +       SR +   L P++    S+P +  +   V++F          
Sbjct: 65  IGFLLAVVGGLLLGLAIGWSRAIYAGLYPLMIGFNSVPKVAVVPILVIWFGIG------- 117

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + A+   F    + +  ++   L  +  ++E+V R+           +G+P SMP   
Sbjct: 118 -TIPAVLTAFLIAFFPIVVNVATGLATMEPEMEDVLRALGAKKLDIMLKVGIPRSMPYFF 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++  +   V SE +          GIG  +  A  + ++  +   ++ +  +  
Sbjct: 177 GSLKVAITLAFVGSVISETVAANA------GIGHMMLAAQSQFNVPLVWAGLVALAVLGI 230

Query: 254 LYDQL---LFRPMIVWSNKFRLERT 275
           +   L   L   M  W+++  + R 
Sbjct: 231 VMYVLMAWLEMRMTGWAHRSGMNRA 255


>gi|256846922|ref|ZP_05552376.1| glycine betaine transport system permease [Fusobacterium sp.
           3_1_36A2]
 gi|294784263|ref|ZP_06749558.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium sp.
           3_1_27]
 gi|256717720|gb|EEU31279.1| glycine betaine transport system permease [Fusobacterium sp.
           3_1_36A2]
 gi|294488129|gb|EFG35480.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium sp.
           3_1_27]
          Length = 513

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 71/187 (37%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +            
Sbjct: 28  LLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITGVGNT---- 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  S Y  +  I   + E S     +  Q+ + + +P ++P L
Sbjct: 84  ----TALIALIIYALLPIIRSTYTGIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVL 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          V  +  +    + +   G+G  I   I   +        L +  + 
Sbjct: 140 MSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILA 192

Query: 253 FLYDQLL 259
            ++D +L
Sbjct: 193 LVFDFIL 199



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 50/180 (27%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + +P   P  ++G         N   ++   +  
Sbjct: 104 GIITINPLIIEASEGMGSTKLQQLFKVKIPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +     +   L  Y     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALVFDFILGLIEKRLTNYKRIKYKI 216


>gi|239980344|ref|ZP_04702868.1| putative ABC transporter permease protein [Streptomyces albus
           J1074]
 gi|291452207|ref|ZP_06591597.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291355156|gb|EFE82058.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 236

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     ++A+VI +L  F  A LA + R     ++ +  +  +IP L   + 
Sbjct: 23  QDLVDATLQHIGITVAAVVIGVLIAFPLAVLAHRRRAFAAPVLAVTTLFYTIPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    I  +    +  +  +    L  +P +  E +       W+
Sbjct: 83  LLPLFGL--------SAALVITGLVLYSLTILVRNTLAGLDAVPEEAREAATGMGYGPWR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + VP ++P L+  + ++        V++  +     ++   G+GS I   +     
Sbjct: 135 LLWEVEVPLALPALLAGVRIT-------TVSTVALTTVGAIVDYGGLGSLILDGLDTDFR 187

Query: 239 LAILYAMLTMLGVIFLYD 256
             +L A +  + +    D
Sbjct: 188 AQVLAASVLCVILAITAD 205



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 19/184 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++I  +I  P+ +    R   ++ +     L    P+   F L++            
Sbjct: 37  VAAVVIGVLIAFPLAVLAHRRRAFAAPVLAVTTLFYTIPSLAMFSLLLPLFG-------- 88

Query: 451 WLSLLMIFGTQWYILF----NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             + L+I G   Y L     N +AG  A P + +E A+      WR    + +P   P  
Sbjct: 89  LSAALVITGLVLYSLTILVRNTLAGLDAVPEEAREAATGMGYGPWRLLWEVEVPLALPAL 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G           + V  +  +G       GLG+ I +  +     +V+   ++     
Sbjct: 149 LAGVRITTVSTVALTTVGAIVDYG-------GLGSLILDGLDTDFRAQVLAASVLCVILA 201

Query: 567 LALN 570
           +  +
Sbjct: 202 ITAD 205


>gi|190893120|ref|YP_001979662.1| nitrate/sulfonate ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190698399|gb|ACE92484.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
          Length = 309

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+           GI
Sbjct: 205 LDLMRTYYASPIQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGATA-----GI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 293



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N                  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +       T G+G+ 
Sbjct: 208 MRTYYASPIQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----TAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTIDIWAALVAGSLLAGIL 289


>gi|116493380|ref|YP_805115.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Pediococcus pentosaceus ATCC 25745]
 gi|116103530|gb|ABJ68673.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Pediococcus pentosaceus ATCC 25745]
          Length = 217

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L  +  ++++ +       L +K R+L   +V + +++Q+IP L  L+  ++    
Sbjct: 26  SRHFLISIYGVILAAIVGIPIGILISKHRKLSGWIVGLANVIQTIPSLAMLSILMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+     +  +   ++  Q  W + +
Sbjct: 86  GVT--------TVIVTVFLYALLPIIKNTYTGMLNVNEAYLDAGKGMGMTKVQVLWMIEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVILAGIR-------NALVLAIGITAIGTFVGAGGLGDIIIRGTNATNGGAIILAG 190

Query: 246 LTMLGVIFLYDQLLF 260
                ++ +   L+ 
Sbjct: 191 ALPTALMAIISDLVL 205



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ + Y  +H     +        I+++     +I+A+I+ IP+GI I     +S  I 
Sbjct: 6   IWQQLAYYFSHNGMYVLSEFSRHFLISIY----GVILAAIVGIPIGILISKHRKLSGWIV 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +       I+ N   G       +
Sbjct: 62  GLANVIQTIPSLAMLSILMLGLGLGVTT----VIVTVFLYALLPIIKNTYTGMLNVNEAY 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +      +T  +    I LP      + G         NA +++   +     +   GL
Sbjct: 118 LDAGKGMGMTKVQVLWMIELPLSLSVILAGIR-------NALVLAIGITAIGTFVGAGGL 170

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           G  I   T   +   ++L   +    +  ++  +   L     + 
Sbjct: 171 GDIIIRGTNATNGGAIILAGALPTALMAIISDLVLGALEKKMRKR 215


>gi|326567292|gb|EGE17409.1| ABC transporter permease protein [Moraxella catarrhalis 12P80B1]
          Length = 244

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 87/227 (38%), Gaps = 14/227 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + L+  +LVI    + +  + +  +P     +  +  D   L  +A  T        +I 
Sbjct: 11  YSLVLIILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTIIG 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           L  +FV + L   SR     + P++ + Q+IP +      V++             L  +
Sbjct: 71  LALSFVLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGI--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  S  + MT ++     ++  D   +  S + + +Q + +L +P +M      + ++
Sbjct: 123 VLVVLSVFFPMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +S      V +E +          G+G Y+    K  +L  +   + 
Sbjct: 183 LSYALISAVVAEWLGG------YYGLGVYMTRVRKSYELDNMFAVIF 223



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 10/230 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ + W  VV    +        + + H    D   +      T+    +  II   +  
Sbjct: 16  IILVIWQFVVAVGILPDYLLPSPWQILHALIDDAKLLAHHAKYTLATAFIGTIIGLALSF 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +    +    + P   L    P     PL+V  + Y  L   + + L + F    
Sbjct: 76  VLSILMDLSRNFRQSVYPLILLNQTIPTIAIAPLLVIWLGYGILPKVVLVVLSVFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  +   D   +  S     ++ +R++ +P    Y+ TG   A   A  +++
Sbjct: 132 PMTIALLDGYRSVSTDELNLFYSMKANIYQTYRHLKIPSAMGYFFTGLKVALSYALISAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           V+E     +      GLG Y+    +      +   +     F + +NR 
Sbjct: 192 VAEWLGGYY------GLGVYMTRVRKSYELDNMFAVIFFDQFFDIGVNRI 235


>gi|300783914|ref|YP_003764205.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Amycolatopsis mediterranei U32]
 gi|299793428|gb|ADJ43803.1| permease component of ABC-type nitrate/sulfonate/bicarbonate
           transport system [Amycolatopsis mediterranei U32]
          Length = 289

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     RTT+  L  +  +++   ++AT+ A+++ L   L P   ++Q +PIL  +   
Sbjct: 87  QLWAALGRTTVVSLVGLGAAIVLGVLWATVMAQAKGLEKALYPYAVVLQCVPILALVPLI 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              F   +        L+ +       ++ M  +    L +  R   E+          +
Sbjct: 147 GALFGYAF--------LSRVIVTVMIALFPMVSNTLFGLHSTDRAQRELFALQGAGRLTR 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-- 237
              L +P ++P +   +  S        V   ++         PG+G  I +        
Sbjct: 199 LLKLQIPAALPSIFVGLRTSAGLS----VIGAIVGDQFFQRGEPGLGVLIQVTASRLMGP 254

Query: 238 --LLAILYAMLTMLGVIFLY 255
                I+ A L  + V   +
Sbjct: 255 ELYATIIIASLYGIAVFLAF 274



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 65/179 (36%), Gaps = 8/179 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V +  A ++ +     +     +   + P+A +L   P     PL+ +   Y  L+   
Sbjct: 100 LVGLGAAIVLGVLWATVMAQAKGLEKALYPYAVVLQCVPILALVPLIGALFGYAFLS--- 156

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++ +    + ++ N + G  +     +E+ +            + +P   P    G 
Sbjct: 157 -RVIVTVMIALFPMVSNTLFGLHSTDRAQRELFALQGAGRLTRLLKLQIPAALPSIFVGL 215

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            T+ G     S++  +           GLG  I  +  +   PE+   ++I   + +A+
Sbjct: 216 RTSAG----LSVIGAIVGDQFFQRGEPGLGVLIQVTASRLMGPELYATIIIASLYGIAV 270


>gi|325970477|ref|YP_004246668.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025715|gb|ADY12474.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 213

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 79/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            + +  ++     +    +L ++ + ++       L  + ++    ++ +   +Q+IP L
Sbjct: 7   FSKNSEAMIASLGQHIALVLISVGLGMVIAIPLGILLTRHKKAAPTVLALAGTVQTIPGL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +++             L A+  +    +  +  + Y  +  +    ++ ++   
Sbjct: 67  VMLGFALIFMGIG--------TLPALAVLTIYSILPILRNTYTGITEVLPSYKDAAKGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q  + + +P ++P +V  + +S      +   + MI  G       G+G +I   +
Sbjct: 119 MTKSQVLFKVELPLALPTIVSGIRISAVYIVSWATLAGMIGAG-------GLGDWIWTGL 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
              +   IL   +    + F +  L+
Sbjct: 172 ATYNTDYILAGAIPSAILAFAFSALI 197



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ + +  +I IP+GI +      +  +   A  +   P  V     +  +    L   
Sbjct: 25  VLISVGLGMVIAIPLGILLTRHKKAAPTVLALAGTVQTIPGLVMLGFALIFMGIGTLPAL 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L++  I      IL N   G +     +K+ A    +T  +    + LP   P  V+G
Sbjct: 85  AVLTIYSIL----PILRNTYTGITEVLPSYKDAAKGIGMTKSQVLFKVELPLALPTIVSG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +     + + ++ +   G       GLG +I       +   ++ G +       A 
Sbjct: 141 IRISAVYIVSWATLAGMIGAG-------GLGDWIWTGLATYNTDYILAGAIPSAILAFAF 193

Query: 570 NRFL 573
           +  +
Sbjct: 194 SALI 197


>gi|118472743|ref|YP_884529.1| taurine transporter permease TauC [Mycobacterium smegmatis str. MC2
           155]
 gi|118174030|gb|ABK74926.1| taurine transport system permease protein TauC [Mycobacterium
           smegmatis str. MC2 155]
          Length = 286

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 95/269 (35%), Gaps = 27/269 (10%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----------LPQ 63
           +    +  +  F  V   + +     Q        V    I L              L +
Sbjct: 31  KALLPLLSVAVFFAVWQAVAVAGIWNQTFVPYPSAVWRAFIDLSTTHDGVRGYAGYLLVE 90

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T  R+++ +VI ++   +   L      L  VL P L  ++++P L +    V++ 
Sbjct: 91  HLYMTLRRVVAGVVIGVVLGVLLGLLMGSVGWLRSVLEPWLTFLRALPPLAYFFLLVIWL 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 K+    LAA+     +    +  +           L+E +R+   +  Q    +
Sbjct: 151 GIDEAPKITLLALAALPPAAVATTAAVVAAPVG--------LQEAARALGATRAQVIRDV 202

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP ++P     + +++   +  VVA+E+         +PG+G  +  A    +   +L 
Sbjct: 203 VVPSALPETFTGIRLAVGMAYSSVVAAELF------NGIPGVGGLVKDASNYNNTPVVLV 256

Query: 244 AMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +  +     + D LL    R  + W  K
Sbjct: 257 GIFAIGFSGLVIDGLLRAVERRAVPWIGK 285



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 10/161 (6%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            + S ++P+   L A P   +F L+V  +          L+L  +            A  
Sbjct: 122 WLRSVLEPWLTFLRALPPLAYFFLLVIWLGIDEAPKITLLALAALPPAAVA----TTAAV 177

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            A P   +E A +   T  +  R +++P   P   TG   A G A+++ + +E+ +    
Sbjct: 178 VAAPVGLQEAARALGATRAQVIRDVVVPSALPETFTGIRLAVGMAYSSVVAAELFNG--- 234

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                G+G  + +++   + P V++G+  +    L ++  L
Sbjct: 235 ---IPGVGGLVKDASNYNNTPVVLVGIFAIGFSGLVIDGLL 272


>gi|91777143|ref|YP_552351.1| glycine betaine/choline/proline ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91689803|gb|ABE33001.1| ABC glycine betaine/choline/proline family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 238

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L  Y  R  L +  +M ++LL       L ++          + I +I  +IP L  L  
Sbjct: 38  LVYYTKRHLLLVGYSMALALLVGIPAGVLLSRPSFARHAERFMQIFNIGNTIPSLAVLAI 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           ++ A+ A+F + +  +T + Y+ + N+   L E +R   ++GWQ
Sbjct: 98  ALGIFGIG--------DIPALIALFLASLLPITRNAYEGMKNVSPALREAARGLGMTGWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +MP ++  +  +++        + +I           +G+ I   I   + 
Sbjct: 150 SLLRVELPNAMPIIIGGVRTALAINVGSAPLAYLIGADS-------LGTLIFPGIYLNNQ 202

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L        +  + D ++
Sbjct: 203 QQLLLGAAATAILALVLDGIV 223



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 81/237 (34%), Gaps = 18/237 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +     +    V  GV + +  ++I +   H    D   +++     +  V   + +A +
Sbjct: 2   IQRPARLIGSLVAIGVVVALLGRAIDFGALHQYTPD---LVYYTKRHLLLVGYSMALALL 58

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + IP G+ +  RP  +   + F Q+       P+     + +          ++   + +
Sbjct: 59  VGIPAGVLL-SRPSFARHAERFMQIFNIGNTIPSLAVLAIALGIFGIG----DIPALIAL 113

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              +   I  N   G        +E A    +TGW+    + LP   P  + G  TA   
Sbjct: 114 FLASLLPITRNAYEGMKNVSPALREAARGLGMTGWQSLLRVELPNAMPIIIGGVRTALAI 173

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              ++ ++         +    LG  I       +  +++LG        L L+  +
Sbjct: 174 NVGSAPLA-------YLIGADSLGTLIFPGIYLNNQQQLLLGAAATAILALVLDGIV 223


>gi|291562997|emb|CBL41813.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 270

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 91/256 (35%), Gaps = 18/256 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P    + A ++      + +        P  +V +    L       +   T   +   
Sbjct: 29  LPAAILVAALLIFWQAAAMGIDAAYILPSPTQVV-VRLWELRGPLFTAHLPATMSVVGIG 87

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++IS++     A L   S      L P++   Q+IP        V++F      KV+   
Sbjct: 88  LLISIILGLGLAVLMDASETAEKALYPLIIASQTIPTTALAPLFVLWFGYTIWSKVLVTV 147

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L   F         +T +++    ++  ++EE+  +F     Q F  L VP  +P     
Sbjct: 148 LITFF--------PITITVFDGFKSVKTEMEELLFTFGADKRQIFMKLKVPAVLPCFFSA 199

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM---LGVI 252
           + M++      ++ +    +G+ +    G+G +    + + D   +   +L +       
Sbjct: 200 IKMAVPLS---IIGA---AIGEWLGAQSGLGYFSRRMMTQLDGAGVFAPILLLSVAAMAA 253

Query: 253 FLYDQLLFRPMIVWSN 268
                LL + +I W N
Sbjct: 254 VWVVTLLEKRIIHWRN 269



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 10/221 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L IFW     G+       S   +V                 TM  V + ++I+ I+ +
Sbjct: 37  ALLIFWQAAAMGIDAAYILPSPTQVVVRLWELRGPLFTAHLPATMSVVGIGLLISIILGL 96

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +         + P        P     PL V    Y          L+ +  T +
Sbjct: 97  GLAVLMDASETAEKALYPLIIASQTIPTTALAPLFVLWFGYT----IWSKVLVTVLITFF 152

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I   V  G  +   + +E+  +F     + +  + +P + P + +    A   +   + 
Sbjct: 153 PITITVFDGFKSVKTEMEELLFTFGADKRQIFMKLKVPAVLPCFFSAIKMAVPLSIIGAA 212

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           + E           +GLG +      +     V   +L++ 
Sbjct: 213 IGEWLG------AQSGLGYFSRRMMTQLDGAGVFAPILLLS 247


>gi|270290100|ref|ZP_06196326.1| osmoprotectant transport system permease [Pediococcus acidilactici
           7_4]
 gi|304385641|ref|ZP_07367985.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pediococcus
           acidilactici DSM 20284]
 gi|270281637|gb|EFA27469.1| osmoprotectant transport system permease [Pediococcus acidilactici
           7_4]
 gi|304328145|gb|EFL95367.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pediococcus
           acidilactici DSM 20284]
          Length = 217

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 75/195 (38%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L  +  ++++ +         AK+R++   ++ + +++Q+IP L  L+  ++    
Sbjct: 26  SRHFLISIYGVILAAIVGIPIGIFIAKNRKISDWVIGLANVIQTIPSLAMLSILMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+     +  +   ++  Q  W + +
Sbjct: 86  GV--------STVIVTVFLYALLPIIKNTYTGMLNVNDAYLDAGKGMGMTKLQVLWMIEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +  +M       V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVILAGIRNAM-------VLAIGITAIGTFVGAGGLGDIIIRGTNATNGGAIILAG 190

Query: 246 LTMLGVIFLYDQLLF 260
                ++ +   L+ 
Sbjct: 191 ALPTALMAIIVDLVL 205



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 15/225 (6%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ + Y  +H     +        I+++     +I+A+I+ IP+GI+I     IS  + 
Sbjct: 6   IWQQLFYYFSHNGMYVLSEFSRHFLISIY----GVILAAIVGIPIGIFIAKNRKISDWVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +       I+ N   G     + +
Sbjct: 62  GLANVIQTIPSLAMLSILMLGLGLGVST----VIVTVFLYALLPIIKNTYTGMLNVNDAY 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +      +T  +    I +P      + G   A   A   + +      G       GL
Sbjct: 118 LDAGKGMGMTKLQVLWMIEIPLSLSVILAGIRNAMVLAIGITAIGTFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           G  I   T   +   ++L   +    +  +   +   L     R 
Sbjct: 171 GDIIIRGTNATNGGAIILAGALPTALMAIIVDLVLGALENRLRRR 215


>gi|218662691|ref|ZP_03518621.1| probable ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 276

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     SI  + VGI +G    +S     + + + + P  V  P+ +  +   
Sbjct: 96  VTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLG 155

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F     +  N   G      +    A     + W+  R +++P    
Sbjct: 156 LPSKVALAFIMVFFV----VFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMS 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I+ +        +   +L++  
Sbjct: 212 WIFASLHVSFGFAIIGAIVGEFVG------ARFGIGQLISIAKGTFDAAGMFAAILLVMV 265

Query: 565 FVLALNRFL 573
             L     +
Sbjct: 266 VTLVAEYIM 274



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL      T    L       +          ++R L  +    +  + SIP +     
Sbjct: 88  GSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++      P KV  A +   F +F         + +Q +    R++   +R    S WQ
Sbjct: 148 FIMIMGLGLPSKVALAFIMVFFVVFA--------NAFQGVREADRNMIANARILGASDWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +M  +  ++ +S     F ++ +   +VG+ V    GIG  I++A    D 
Sbjct: 200 VTRTVVIPSAMSWIFASLHVSFG---FAIIGA---IVGEFVGARFGIGQLISIAKGTFDA 253

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+L ++ V  + + ++
Sbjct: 254 AGMFAAILLVMVVTLVAEYIM 274


>gi|297159339|gb|ADI09051.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 266

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D +    +      L     +     ++++ I  +  F  A LA + R +   ++ +  I
Sbjct: 11  DWICGEYVRTRSQELTDATVQHVWITVASVAIGFVVAFPLALLARRWRSVAGPVLGLTTI 70

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + ++P L   +  + +F          +    I  +    +  +  ++   L ++P +  
Sbjct: 71  LYTVPSLAMFSLLLPFFGV--------SAAVVITGLVLYSLTILVRNIMAGLASVPEEAR 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R       +  + + +P ++P L+  + ++        V++  +     ++   G+G
Sbjct: 123 EAARGMGYGPLRLLFGVELPLALPALMAGLRIT-------TVSTISLTTVGAIVGYGGLG 175

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           + I   ++      +L A +  + +    D
Sbjct: 176 NLIYEGMRSFFKAQVLTASVLCVALAVAAD 205



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  V  + I  ++  P+ +       ++  +     +L   P+   F L++        
Sbjct: 33  VWITVASVAIGFVVAFPLALLARRWRSVAGPVLGLTTILYTVPSLAMFSLLLPFFGVSAA 92

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG ++ P + +E A        R    + LP   P  
Sbjct: 93  VVITGLVLYSLTI----LVRNIMAGLASVPEEAREAARGMGYGPLRLLFGVELPLALPAL 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G         + + V  +  +G       GLG  I E        +V+   ++     
Sbjct: 149 MAGLRITTVSTISLTTVGAIVGYG-------GLGNLIYEGMRSFFKAQVLTASVLCVALA 201

Query: 567 LALN 570
           +A +
Sbjct: 202 VAAD 205


>gi|27468935|ref|NP_765572.1| opuCB protein [Staphylococcus epidermidis ATCC 12228]
 gi|57865410|ref|YP_189586.1| amino acid ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|251811860|ref|ZP_04826333.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875148|ref|ZP_06284021.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|293367143|ref|ZP_06613814.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27316483|gb|AAO05658.1|AE016750_263 opuCB protein [Staphylococcus epidermidis ATCC 12228]
 gi|57636068|gb|AAW52856.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|251804657|gb|EES57314.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295913|gb|EFA88434.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|291318704|gb|EFE59079.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|319400156|gb|EFV88391.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCB [Staphylococcus epidermidis FRI909]
 gi|329734523|gb|EGG70834.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU045]
 gi|329734934|gb|EGG71231.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU028]
          Length = 211

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A       + A++++++       L +K++R   V++ +  ++Q+IP L  L  
Sbjct: 10  SQLLSKAVEHFYISMFALLLAIVVAVPLGILLSKTQRTANVVLTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI +++ +  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTKFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G  +   +     
Sbjct: 122 LMKDVEMPLALPLIISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A + +  +  + D +L
Sbjct: 175 PMIISAAIVVTLLALVIDFIL 195



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  +  +++A ++ +P+GI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISMFALLLAIVVAVPLGILLSKTQRTANVVLTVAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T ++  + + +P   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTKFQLMKDVEMPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAIVVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LVIDFIL 195


>gi|269104373|ref|ZP_06157069.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161013|gb|EEZ39510.1| hydroxymethylpyrimidine ABC transporter transmembrane component
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 267

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 17/175 (9%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L+PIL   Q+IP+       +++       K++ A L   F + T          +
Sbjct: 107 VKRWLLPILIASQAIPVFAIAPILMLWLGYGMASKIVMAGLIIFFPVTTCC--------F 158

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L + P+   +++++   + WQ    + +P ++P L   + +++      V+A    VV
Sbjct: 159 DGLRHTPQGYLDLAKTMGATPWQLLKTIRLPAALPALASGIRVAV------VIAPIGAVV 212

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           G+ V    G+G  +  A     +  +  A+  +  +      L   L + +I W 
Sbjct: 213 GEWVGSSEGLGYLMLQANARMMIDEMFAALTILALLSISLYYLTDKLLKKLIPWQ 267



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 57/159 (35%), Gaps = 10/159 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P      A P     P+++  + Y   +  +   L++ F     +      G  
Sbjct: 107 VKRWLLPILIASQAIPVFAIAPILMLWLGYGMASKIVMAGLIIFF----PVTTCCFDGLR 162

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  + ++A +   T W+  + I LP   P   +G   A   A   ++V E        
Sbjct: 163 HTPQGYLDLAKTMGATPWQLLKTIRLPAALPALASGIRVAVVIAPIGAVVGEWVG----- 217

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             + GLG  + ++  +    E+   + I+    ++L   
Sbjct: 218 -SSEGLGYLMLQANARMMIDEMFAALTILALLSISLYYL 255


>gi|89055192|ref|YP_510643.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88864741|gb|ABD55618.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 315

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 9/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  SL  +A +T    L   VI  L     A     +R + + ++P     Q+IPIL   
Sbjct: 107 NPRSLYFHAFQTLAPTLLGFVIGTLAGMGLAVAIVHNRAMDLSVMPWAIASQTIPILAIA 166

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V    +    ++   L + +  F    + +   M + L +      ++ R++  S 
Sbjct: 167 PIVIVVLNAVGLVGLVPKSLISAYLSF----FPVVVGMVKGLRSPGVMDLDLLRTYSASA 222

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q FW L +P S+P L  ++ + ++      + +E+           G+G+ +       
Sbjct: 223 NQTFWKLRLPASVPFLFASLKVGIAAALVGTIVAEL-----PTGARFGLGARLLTGSYYG 277

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
             + I  A+        +   LL
Sbjct: 278 QTIQIWSALFMAAICAAILVTLL 300



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 74/200 (37%), Gaps = 5/200 (2%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            +   + +    T+   ++  +I ++  + + + I     +   + P+A      P    
Sbjct: 106 PNPRSLYFHAFQTLAPTLLGFVIGTLAGMGLAVAIVHNRAMDLSVMPWAIASQTIPILAI 165

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+V+  ++   L   +  SL+  + + + ++  ++ G  +      ++  ++  +  + 
Sbjct: 166 APIVIVVLNAVGLVGLVPKSLISAYLSFFPVVVGMVKGLRSPGVMDLDLLRTYSASANQT 225

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + LP   P+           A   +IV+E+ +         GLGA +   +  G   
Sbjct: 226 FWKLRLPASVPFLFASLKVGIAAALVGTIVAELPTGARF-----GLGARLLTGSYYGQTI 280

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           ++   + +       L   L
Sbjct: 281 QIWSALFMAAICAAILVTLL 300


>gi|288920440|ref|ZP_06414749.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288348169|gb|EFC82437.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 299

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 11/212 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
              Y+       +   VI  G   T+    V   + ++  + + I       +   + P 
Sbjct: 79  VWQYLFTVPDAAENRDVILDGLWHTLGDAAVGYAVGTVAALGIAIAFVLSRSVEQALMPV 138

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A +L + P     PL+        L  ++   +++ F      L N++ G  +  +   +
Sbjct: 139 AMMLRSVPLVAMTPLLTLIFGRGLLAVSVIAGIVVFF----PSLVNLVFGLRSASSAAAD 194

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +  ++    +   R + LP   P     A  +   A   ++++E  + G       GLG 
Sbjct: 195 LVLAYGGGPFTVLRKVSLPSALPALFVSARISVPSAVIGALLAEWLATGK------GLGY 248

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +  S +   +  V    +++    +A+   +
Sbjct: 249 LMQRSQQTFDYGGVWAATVLITVASVAIYALV 280



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 71/212 (33%), Gaps = 14/212 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +  +     +   +      T         +  +     A     SR +   L+P+  ++
Sbjct: 83  LFTVPDAAENRDVILDGLWHTLGDAAVGYAVGTVAALGIAIAFVLSRSVEQALMPVAMML 142

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +S+P++       + F       ++   + A   +F   + N+ F +  S  +   DL  
Sbjct: 143 RSVPLVAMTPLLTLIFGR----GLLAVSVIAGIVVFFPSLVNLVFGLR-SASSAAADLVL 197

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
               +    +     + +P ++P L  +  +S+       + +E +  G       G+G 
Sbjct: 198 A---YGGGPFTVLRKVSLPSALPALFVSARISVPSAVIGALLAEWLATGK------GLGY 248

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  + +  D   +  A + +         L+
Sbjct: 249 LMQRSQQTFDYGGVWAATVLITVASVAIYALV 280


>gi|149182176|ref|ZP_01860658.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           sp. SG-1]
 gi|148850127|gb|EDL64295.1| Hydroxymethylpyrimidine transport system permease protein [Bacillus
           sp. SG-1]
          Length = 249

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  + +I  I+  +  I    +P     +        +   + + T    L   +I   
Sbjct: 2   VIILLFIIWEISAKVADIPAWLLPSPSRIVSESFAVWPTFQGHLTSTVYLTLLGFLIGCG 61

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A        L   + P+L + Q+IPI+      VV+F      K+I   L   F 
Sbjct: 62  IGLVVAVGLHLVPILRESVYPLLILSQNIPIIVLAPLLVVWFGFGLLPKMIVITLVCFFP 121

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  + +                +L+   +    S  Q F  L  P ++P +   + +S +
Sbjct: 122 VAVAAL--------DGFRQTGNELKHYMQMAGASKMQIFRKLEWPHALPSIFSGVKISAT 173

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML---GVIFLYDQL 258
                 V SE +          GIG ++ LA        +  A+  ++    V F     
Sbjct: 174 YSVMGAVISEWLG------AKQGIGVFMTLASSSFRTDRVFVAIFAIMLLSLVFFAIIIG 227

Query: 259 LFRPMIVWSNK 269
           L + +I W  K
Sbjct: 228 LEKWLIKWQPK 238



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +L I W        I          +   ++            T++  ++  +I   
Sbjct: 2   VIILLFIIWEISAKVADIPAWLLPSPSRIVSESFAVWPTFQGHLTSTVYLTLLGFLIGCG 61

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I + V + +   P +   + P   L    P  V  PL+V    +  L   + ++L+    
Sbjct: 62  IGLVVAVGLHLVPILRESVYPLLILSQNIPIIVLAPLLVVWFGFGLLPKMIVITLV---- 117

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + +    + G     N+ K        +  + +R +  P   P   +G   +   +  
Sbjct: 118 CFFPVAVAALDGFRQTGNELKHYMQMAGASKMQIFRKLEWPHALPSIFSGVKISATYSVM 177

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +++SE            G+G ++  ++       V + +  +    L  
Sbjct: 178 GAVISEWLG------AKQGIGVFMTLASSSFRTDRVFVAIFAIMLLSLVF 221


>gi|329726560|gb|EGG63023.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU144]
          Length = 211

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A       + A++++++       L +K++R   V++ +  ++Q+IP L  L  
Sbjct: 10  SQLLSKAVEHFYISMFALLLAIVVAVPLGILLSKTQRRANVVLTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI +++ +  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTKFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G  +   +     
Sbjct: 122 LMKDVEMPLALPLIISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A + +  +  + D +L
Sbjct: 175 PMIISAAIVVTLLALVIDFIL 195



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  +  +++A ++ +P+GI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISMFALLLAIVVAVPLGILLSKTQRRANVVLTVAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T ++  + + +P   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTKFQLMKDVEMPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAIVVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LVIDFIL 195


>gi|15645437|ref|NP_207611.1| osmoprotection protein (proWX) [Helicobacter pylori 26695]
 gi|2313949|gb|AAD07866.1| osmoprotection protein (proWX) [Helicobacter pylori 26695]
          Length = 553

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 75/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L          VAI +    + Y++  F +   +Y I L       V +   +  +  
Sbjct: 17  WLLHSIDVATQHLVAIVLKISVVKYLIKEF-HDRFIYFIDLIAQHFIIVALSSFLVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+ + +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVLVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEVREEVIKAAIGLGCNPKELFFKVRFLLAIPQILAGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G LI+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +   L   + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVLVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFKVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILAGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|313204231|ref|YP_004042888.1| phosphate ABC transporter membrane protein 1, phot family
           [Paludibacter propionicigenes WB4]
 gi|312443547|gb|ADQ79903.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Paludibacter propionicigenes WB4]
          Length = 396

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 17/231 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRMLSAMVISLLFTFVYATLAAK-- 92
            ET  P D              PQY        T    L A+++SL F    A   A+  
Sbjct: 145 HETLKPGDFFGGKEWYPTASPSPQYGLLPLLLGTIWVSLGAILLSLPFGIAVAVYLAEIA 204

Query: 93  SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           + R+  +L PI++++  IP + +    L   V +   L+   V    LA    +    + 
Sbjct: 205 TMRVRNILKPIIELLAGIPSVVYGFFGLVVIVPFLQKLFHLPVGETALAGSVVLGIMALP 264

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +      ++  +PR ++E S +   + WQ  + + +P++  G+    ++ +       +
Sbjct: 265 TIITVAEDAMRTVPRAMKEASLALGATHWQTIYKVIIPYAKSGITSAAVLGIGRAIGETM 324

Query: 209 ASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           A  M+     VI      P+  I + IA  + E    +  Y  L MLGVI 
Sbjct: 325 AVLMVTGNAAVIPHTLLEPVRTIPATIAAELGEVSAGSGHYQALFMLGVIL 375



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 8/183 (4%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y     + Q  L  + LG I +    +L+ +   I + V +       + + ++P  +L
Sbjct: 159 WYPTASPSPQYGLLPLLLGTIWVSLGAILLSLPFGIAVAVYLAEIATMRVRNILKPIIEL 218

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
           LA  P+ V+         P +            L  S+++       I+          P
Sbjct: 219 LAGIPSVVYGFFGLVVIVPFLQKLFHLPVGETALAGSVVLGIMALPTIITVAEDAMRTVP 278

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
              KE + +   T W+    +I+P       + A+   G A   ++   + +     +  
Sbjct: 279 RAMKEASLALGATHWQTIYKVIIPYAKSGITSAAVLGIGRAIGETMAVLMVTGNAAVIPH 338

Query: 537 TGL 539
           T L
Sbjct: 339 TLL 341


>gi|225572292|ref|ZP_03781156.1| hypothetical protein RUMHYD_00586 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040174|gb|EEG50420.1| hypothetical protein RUMHYD_00586 [Blautia hydrogenotrophica DSM
           10507]
          Length = 265

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 15/208 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     IT++  +       +  + + + +   P +S  ++P+  +L + P +   PL+
Sbjct: 69  SLFTHIGITLWETIASFFFVVLFGLGIAVLLWIFPKLSKILEPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+  G      D  ++ ++   T       +
Sbjct: 129 IVWLGANQKTIIVAGISVAIFGS----IINLYTGFHEIDKDKIKLIATLGGTKLDTLLKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  ++      G      I+ E            GLG  I   ++      V++
Sbjct: 185 VLPSSIPLILSVMKVNIGLCLVGVIIGEFIGARQ------GLGYLIIYGSQVFKLSWVLM 238

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            ++I+C   +AL   +         R  
Sbjct: 239 SIVILCIIAMALYSLI-----NLAERRY 261



 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T    +++    +LF    A L     +L  +L P L ++ S+P       
Sbjct: 68  QSLFTHIGITLWETIASFFFVVLFGLGIAVLLWIFPKLSKILEPYLVVLNSLPKSALAPL 127

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V+        ++     AIF            ++Y     I +D  ++  +   +   
Sbjct: 128 LIVWLGANQKTIIVAGISVAIFGSI--------INLYTGFHEIDKDKIKLIATLGGTKLD 179

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P ++  M +++      V+  E I          G+G  I    +   L
Sbjct: 180 TLLKVVLPSSIPLILSVMKVNIGLCLVGVIIGEFIG------ARQGLGYLIIYGSQVFKL 233

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L +++ +  +      L+
Sbjct: 234 SWVLMSIVILCIIAMALYSLI 254


>gi|331002190|ref|ZP_08325709.1| hypothetical protein HMPREF0491_00571 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411284|gb|EGG90700.1| hypothetical protein HMPREF0491_00571 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 255

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 85/215 (39%), Gaps = 16/215 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I+P +F ++  ++   + ++ +        P  IV  +     +  L  +   T    + 
Sbjct: 9   IYPVVFGIVFLLIWQILCSVKIIPSYLMPSPLQIVMALAGDFTL--LMYHLIYTLAESIL 66

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +++ ++   ++A L  +  +L  +  P + I Q+IP +      V++F           
Sbjct: 67  GLILGVILGLIFALLMDRFLKLYKIFYPFIIISQTIPTIAIAPLLVLWFGYDL------- 119

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  I  I     + +T  +++S  +  RD   + +S   S +  + ++ +P SM     
Sbjct: 120 -LPKIILIVLVTFFPITIGVFESFKSTDRDEINLLKSMGASEFDIYRFIKLPSSMGKFFA 178

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            + +S S      V SE +          G+G Y+
Sbjct: 179 ALKISASYSVVGGVISEWLGG------FRGLGVYM 207



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   +++    T+   ++ +I+  I+ +   + +     +     PF  +    P    
Sbjct: 48  GDFTLLMYHLIYTLAESILGLILGVILGLIFALLMDRFLKLYKIFYPFIIISQTIPTIAI 107

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V    Y      L   +L++  T + I   V     +   D   +  S   + +  
Sbjct: 108 APLLVLWFGY----DLLPKIILIVLVTFFPITIGVFESFKSTDRDEINLLKSMGASEFDI 163

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R+I LP     +      +   +    ++SE            GLG Y+    +  +F 
Sbjct: 164 YRFIKLPSSMGKFFAALKISASYSVVGGVISEWLGG------FRGLGVYMTRVRKAYAFD 217

Query: 554 EVVL 557
           ++  
Sbjct: 218 KMFA 221


>gi|242243766|ref|ZP_04798210.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
 gi|242232769|gb|EES35081.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
          Length = 211

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A       + A++++++       L +K++R+  V++ +  ++Q+IP L  L  
Sbjct: 10  SQLLSKAVEHFYISMFALLLAIVVAVPLGILLSKTQRIANVVLTVAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI +++ +  +S  ++ +Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTKFQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G  +   +     
Sbjct: 122 LMKDVEMPLALPLIISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A + +  +  + D +L
Sbjct: 175 PMIISAAIVVTLLALVIDFIL 195



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  +  +++A ++ +P+GI +     I++ +   A +L   P      +++        
Sbjct: 20  FYISMFALLLAIVVAVPLGILLSKTQRIANVVLTVAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T ++  + + +P   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTKFQLMKDVEMPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAIVVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LVIDFIL 195


>gi|229048488|ref|ZP_04194051.1| ABC transporter permease protein [Bacillus cereus AH676]
 gi|228722853|gb|EEL74235.1| ABC transporter permease protein [Bacillus cereus AH676]
          Length = 191

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 79/183 (43%), Gaps = 12/183 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++         PN+ 
Sbjct: 6   VGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNIS 60

Query: 452 LSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP  ++  
Sbjct: 61  SSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFPAIISTL 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
               G +W   I  E+       +   GLG  I+   +  +F  ++L VL+ C     + 
Sbjct: 121 KVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNFTLILLSVLLTCVLATLMY 174

Query: 571 RFL 573
            F+
Sbjct: 175 VFV 177



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 14/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L      ++  +   + AT       L  VL P L ++ ++P +      +V F     
Sbjct: 1   MLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNIS 60

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    + +I              +Y +   +  +  +V  +F  + WQ +  + +P S
Sbjct: 61  SSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPAS 112

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  + +++   W  V+  E++V         G+G  I+   +  +   IL ++L  
Sbjct: 113 FPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLILLSVLLT 166

Query: 249 LGVIFLYDQLL 259
             +  L    +
Sbjct: 167 CVLATLMYVFV 177


>gi|224534353|ref|ZP_03674931.1| phosphate ABC transporter, permease protein [Borrelia spielmanii
           A14S]
 gi|224514455|gb|EEF84771.1| phosphate ABC transporter, permease protein [Borrelia spielmanii
           A14S]
          Length = 514

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIILIVVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIILIVVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|261379782|ref|ZP_05984355.1| abcb protein [Neisseria subflava NJ9703]
 gi|284797464|gb|EFC52811.1| abcb protein [Neisseria subflava NJ9703]
          Length = 265

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 81/193 (41%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+++R VV I +A +  +  G+  G      + ++P   +L A P  ++  + +    + 
Sbjct: 74  ISLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P +  
Sbjct: 134 NPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTG 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++    A        I++E+         + G+GA IA++        V+  V+++  
Sbjct: 190 YVISSVGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVIV 243

Query: 565 FVLALNRFLWHPL 577
           FV      +  PL
Sbjct: 244 FVSLFEYLITKPL 256



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 89/196 (45%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGISVALVAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ 
Sbjct: 187 LTGYVISSVGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
           ++  + L++ L+ +P+
Sbjct: 241 VIVFVSLFEYLITKPL 256


>gi|332298529|ref|YP_004440451.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332181632|gb|AEE17320.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 257

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 84/236 (35%), Gaps = 14/236 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
                 +++  +   ++        P +    +   +      Q+   T LR ++A  +S
Sbjct: 18  ISFTVMLVLWQLAAAVVRSPLILPYPAETAAALCRNIRTPVFWQHIGATALRSVAAFAVS 77

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +    V       S+    +L   L +++S P++ F+  ++ +F         G+ L  +
Sbjct: 78  VTAGTVIGVCCGVSKTFRRLLEFPLAVIRSTPVVSFILLSIFWF---------GSSLVPV 128

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F      +  +  ++   + +  R L + +R +  S  +   Y+ +P   P      + +
Sbjct: 129 FVSVLMSLPVVIAAVSAGIGSADRKLLDCARVYGFSAARTARYVYLPSCTPYFWSGALSA 188

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               W  V A E++ +          G+ +  A    +   +    + ++ + F  
Sbjct: 189 FGLSWKVVAAGEVLSLPRRAA-----GTLLYNAKVHLETADVFAVTIVLIILCFTL 239



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 10/187 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T  R V    ++      +G+  G        ++    ++ + P   F  L +     
Sbjct: 64  GATALRSVAAFAVSVTAGTVIGVCCGVSKTFRRLLEFPLAVIRSTPVVSFILLSIFWFGS 123

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +L    + +  +   ++  V AG  +      + A  +  +  R  RY+ LP   
Sbjct: 124 -----SLVPVFVSVLMSLPVVIAAVSAGIGSADRKLLDCARVYGFSAARTARYVYLPSCT 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           PY+ +GA++A G +W      EV S           G  +  +       +V    +++ 
Sbjct: 179 PYFWSGALSAFGLSWKVVAAGEVLSLPRRAA-----GTLLYNAKVHLETADVFAVTIVLI 233

Query: 564 CFVLALN 570
                L 
Sbjct: 234 ILCFTLE 240


>gi|328555090|gb|AEB25582.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCD [Bacillus amyloliquefaciens TA208]
 gi|328913445|gb|AEB65041.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCD [Bacillus amyloliquefaciens LL3]
          Length = 217

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L A++  +L       L  + +R    ++ I++I+Q++P L  L F
Sbjct: 13  GELLYKTWEHLYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              ++ A+ A+F   V  +  + Y  +  + R L E  +   ++ W+
Sbjct: 73  FIPLLGVG--------KVPAVAALFFYSVLPILRNTYTGILGVNRHLLESGKGIGMAAWE 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  +  S      +   +  I  G       G+G YI + +     
Sbjct: 125 QIRLVELPLAAPVIMAGIRTSSIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQP 177

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+   + +  +    D  L
Sbjct: 178 EYIIAGAVPVTILAAAVDYAL 198



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 59/187 (31%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ ++   +  +P+G+ +      +  +     ++   P+       +  +     
Sbjct: 23  LYISLIAVMAGILAAVPLGVLLTRMKRGAGAVIGIVNIIQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +     + F +   IL N   G         E      +  W   R + LP   P  
Sbjct: 81  --KVPAVAALFFYSVLPILRNTYTGILGVNRHLLESGKGIGMAAWEQIRLVELPLAAPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSSIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIAGAVPVTILA 191

Query: 567 LALNRFL 573
            A++  L
Sbjct: 192 AAVDYAL 198


>gi|282901071|ref|ZP_06309004.1| Substrate-binding region protein of ABC-type glycine betaine
           transport system [Cylindrospermopsis raciborskii CS-505]
 gi|281194162|gb|EFA69126.1| Substrate-binding region protein of ABC-type glycine betaine
           transport system [Cylindrospermopsis raciborskii CS-505]
          Length = 542

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 79/226 (34%), Gaps = 12/226 (5%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           +L++   +   P++ V  + +      +   +    + +  AM+I++             
Sbjct: 1   MLVNVENKWPNPQNKVKAMFLLQHSKEILIGSLEHLVLVSIAMMIAITIGIPLGIYITHR 60

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
            +    ++ + + +Q++P L         F+   P         AI A+    +  +  +
Sbjct: 61  PKFAPAILGLANAIQTVPSLAIF-----GFLISVPFLGGIGRNPAIVALTLYALLPIIRN 115

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  +  I   + E      ++  +    + +P ++P ++  + ++        V S  I
Sbjct: 116 TYIGINGISPAIREAGIGMGMTERELLLKVEIPLALPVILAGVRVA-------TVISVGI 168

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 I   G+G++I   I   +   IL   +    +    D  L
Sbjct: 169 ATIAAAIGGGGLGTFIFRGISTVNNELILAGAIPSALIALGADFCL 214



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 1/147 (0%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   F  Q    ++      +  V + ++IA  I IP+GI+I  RP  +  I   A  + 
Sbjct: 16  VKAMFLLQHSKEILIGSLEHLVLVSIAMMIAITIGIPLGIYITHRPKFAPAILGLANAIQ 75

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+   F  ++S      +  N  +  L ++     I+ N   G +      +E     
Sbjct: 76  TVPSLAIFGFLISVPFLGGIGRNPAIVALTLY-ALLPIIRNTYIGINGISPAIREAGIGM 134

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITA 513
            +T       + +P   P  + G   A
Sbjct: 135 GMTERELLLKVEIPLALPVILAGVRVA 161


>gi|254718419|ref|ZP_05180230.1| ABC transporter, permease protein [Brucella sp. 83/13]
 gi|265983385|ref|ZP_06096120.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306838846|ref|ZP_07471676.1| ABC transporter, permease protein [Brucella sp. NF 2653]
 gi|264661977|gb|EEZ32238.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306406044|gb|EFM62293.1| ABC transporter, permease protein [Brucella sp. NF 2653]
          Length = 258

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V+  +++ S + I   I +   P     + P      A P     P++   + 
Sbjct: 63  AAATICEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLG 122

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y   +  + +++LMIF   + ++     G         + A             I +P  
Sbjct: 123 YGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETSLIDAAEILGAGRMAILFRIRIPSA 178

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP   +G   A   A   ++V E          + GLG  +  +  +     +   + ++
Sbjct: 179 FPSLASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLANGRAKVDLMFACLFVL 232

Query: 563 CCFVLALNRFL 573
             F + L+  +
Sbjct: 233 AAFTMLLHGLV 243



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +  +  +  +   + + A+ T   +L  +V+        A     S     +++P++
Sbjct: 43  PGPLDVVQALVTNAGLIAENAAATICEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVM 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IPI        ++       K+  A L   F + ++         +  +      
Sbjct: 103 VFSQAIPIFALAPILTLWLGYGPASKIAVAVLMIFFPVVST--------FFDGMRRTETS 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L + +           + + +P + P L   + ++       V A    VVG+ V    G
Sbjct: 155 LIDAAEILGAGRMAILFRIRIPSAFPSLASGLSLA------AVYAPIGAVVGEWVGASRG 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
           +G  + LA     +  +   +  +     L   L+    R +  W  K
Sbjct: 209 LGYLMLLANGRAKVDLMFACLFVLAAFTMLLHGLVSHFARKLAAWPKK 256


>gi|73542179|ref|YP_296699.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119592|gb|AAZ61855.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 216

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L +  +     + SA+ +++L          + R L   ++ +  I+ ++P +   
Sbjct: 10  SWPTLLKLTAEHLALVGSAVGMAILIGVPLGIAITRFRWLATPVLTLATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F            L A+ A+F   +  +  + Y +L NI   ++E  R   ++ 
Sbjct: 70  GLMIPIFARFGHAL---GYLPAVTAVFLYSLLPIMRNTYTALVNIDPGIQEAGRGIGMTT 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++         + +I  G       G+G  I  AI + 
Sbjct: 127 WQRMRRVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  +    + +  +  + D  L
Sbjct: 180 NMSKLAVGAILVSVLAIVADAFL 202



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    +  V   + +A +I +P+GI I     +++ +   A ++   P+   F 
Sbjct: 11  WPTLLKLTAEHLALVGSAVGMAILIGVPLGIAITRFRWLATPVLTLATIVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   + +      L     +   +   I+ N            +E      +T W+  
Sbjct: 71  LMIPIFARFGHALGYLPAVTAVFLYSLLPIMRNTYTALVNIDPGIQEAGRGIGMTTWQRM 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA       + ++ +   G       GLG  I ++  + +  +
Sbjct: 131 RRVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQSNMSK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           + +G +++    +  + FL
Sbjct: 184 LAVGAILVSVLAIVADAFL 202


>gi|255102361|ref|ZP_05331338.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile QCD-63q42]
          Length = 511

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ + +IP +  L F + +               A+ A+    +  M  + Y  + N+ 
Sbjct: 58  TINFLYTIPSISMLGFLIPFSGIGNT--------TAVIALTIYALLPMVRNTYTGITNVD 109

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +++ E +R    + +Q  + + +P ++P ++  +          V+ +  +    + I  
Sbjct: 110 KNILEAARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGA 162

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I   I   + +  +   + +  +  ++D +L
Sbjct: 163 GGLGVAIYRGITTNNTIMTITGSILIALLALIFDFIL 199



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P+      ++      +    + L++  +      ++ N   G +    +  E
Sbjct: 59  INFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALL----PMVRNTYTGITNVDKNILE 114

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     T ++    I LP   P  ++G         N  I++   +     +   GLG 
Sbjct: 115 AARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGAGGLGV 167

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I       +    + G +++    L  +  L
Sbjct: 168 AIYRGITTNNTIMTITGSILIALLALIFDFIL 199


>gi|325121686|gb|ADY81209.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Acinetobacter calcoaceticus PHEA-2]
          Length = 223

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 4/118 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++  V     I+S+I IP+GI  GF   IS   +PF +     PA  F  L V+ +    
Sbjct: 101 SIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGI-- 158

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +     +++ GT +  +  +            E   +      +   ++++P   
Sbjct: 159 --NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAAI 214



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            +   + SA  IS L       L   S+R+ ++  P ++  + +P   F    V      
Sbjct: 100 HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN 159

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              K        I  I    ++     +  +   + R L E   +   +  +  +++ +P
Sbjct: 160 DAPK--------IAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIP 211

Query: 187 FSM 189
            ++
Sbjct: 212 AAI 214


>gi|255308260|ref|ZP_05352431.1| putative osmoprotectant ABC transporter,substrate-binding/permease
           protein [Clostridium difficile ATCC 43255]
          Length = 511

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ + +IP +  L F + +               A+ A+    +  M  + Y  + N+ 
Sbjct: 58  TINFLYTIPSISMLGFLIPFSGIGNT--------TAVIALTIYALLPMVRNTYTGITNVD 109

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +++ E +R    + +Q  + + +P ++P ++  +          V+ +  +    + I  
Sbjct: 110 KNILEAARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGA 162

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I   I   + +  +   + +  +  ++D +L
Sbjct: 163 GGLGVAIYRGITTNNTIMTITGSILIALLALIFDFIL 199



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P+      ++      +    + L++  +      ++ N   G +    +  E
Sbjct: 59  INFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALL----PMVRNTYTGITNVDKNILE 114

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     T ++    I LP   P  ++G         N  I++   +     +   GLG 
Sbjct: 115 AARGMGSTDFQILYKIKLPLALPVIMSGIR-------NMVIMTIALAGIASFIGAGGLGV 167

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I       +    + G +++    L  +  L
Sbjct: 168 AIYRGITTNNTIMTITGSILIALLALIFDFIL 199


>gi|125719127|ref|YP_001036260.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Streptococcus sanguinis SK36]
 gi|125499044|gb|ABN45710.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component, putative [Streptococcus sanguinis SK36]
          Length = 250

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R    +  +L  +++  ++  L   + +  +P  +        D   L  ++  T    L
Sbjct: 9   RQQIGLLGMLGVLVIWQVMGWLKL-LPKFILPTPLEIGQAFIRDAGFLASHSWATLKVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ ++   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLVLGVILACILAILMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISL 233

Query: 254 L 254
           L
Sbjct: 234 L 234



 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + + W  +     +          +     +D  ++      T+   ++ +++  I+  
Sbjct: 19  GVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLVLGVILAC 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I +     ++  I P   ++   P     P++V  + Y      L   +L+I  T +
Sbjct: 79  ILAILMDSLSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG----ILPKIVLIILTTTF 134

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +++ G      D   +        W+   +  +P   PY+  G   +   A+  ++
Sbjct: 135 PIIVSILDGFRHCDRDTMTLFELMQANRWQILWHFKIPASLPYFYAGLRVSVSYAFITTV 194

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           VSE            GLG Y+ +S +   +  +   ++++    L   + +
Sbjct: 195 VSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLLGMKLV 239


>gi|118589880|ref|ZP_01547284.1| putative permease abc transporter protein [Stappia aggregata IAM
           12614]
 gi|118437377|gb|EAV44014.1| putative permease abc transporter protein [Stappia aggregata IAM
           12614]
          Length = 296

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 9/225 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +  V      +        SL  +   T    L   +I      + A     SR
Sbjct: 66  VLPAPHQVLVEIWDTTVNKKITSKRSLVYHTGITLSSTLLGFLIGTTLGILLAIGIVHSR 125

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            L   L+P +   Q+IPIL      +V    +    ++   + + +  F    + +T  M
Sbjct: 126 VLDKSLMPWVISSQTIPILAIAPMIIVVLNAVGISGLLPKAMISTYLSF----FPVTVGM 181

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +      ++  ++  +  Q FW L +P+++P L  +M + M+      +  E+  
Sbjct: 182 VKGLRSPEVIHMDLMHTYSATRIQAFWKLRLPYAVPYLFTSMKIGMAASLVGAIVGEL-- 239

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  + G+G+ +         + I  A+L    +      L+
Sbjct: 240 ---PTGAVAGLGARLLAGSYYGQTVQIWSALLMAAFLAGSLVALI 281



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 76/196 (38%), Gaps = 5/196 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++  +I + + I + I I     +   + P+       P     P++
Sbjct: 91  SLVYHTGITLSSTLLGFLIGTTLGILLAIGIVHSRVLDKSLMPWVISSQTIPILAIAPMI 150

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + +   ++ G  +      ++  ++  T  + +  +
Sbjct: 151 IVVLNAVGISGLLPKAMISTYLSFFPVTVGMVKGLRSPEVIHMDLMHTYSATRIQAFWKL 210

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY  T        +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 211 RLPYAVPYLFTSMKIGMAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIWS 265

Query: 558 GVLIMCCFVLALNRFL 573
            +L+      +L   +
Sbjct: 266 ALLMAAFLAGSLVALI 281


>gi|91779633|ref|YP_554841.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91692293|gb|ABE35491.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
          Length = 252

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 58/175 (33%), Gaps = 13/175 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +   + P      A P  V +P+++  +          L  +        +  N + G
Sbjct: 85  PRVRRVLDPLLLSYYAVPVFVLYPILIVVLGL----NRWPLVGIGFLFAVVAMAVNTLNG 140

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P      A    +  +   R I LP   P+  TG       A+ A +  E    G 
Sbjct: 141 LERVPRVLLRTARVCRLNTFDEIRLITLPSSLPFVFTGIKLTVVYAFIAVVAGEFVLSG- 199

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH---PLYLYGTR 583
                +G G  IA +      P +   +++M  FV +LN  L      LY    R
Sbjct: 200 -----SGFGYQIAFAYNNFDNPTMYGLMVLMLAFVSSLNALLRTAEARLYRRIRR 249



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 14/166 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
            R+  VL P+L    ++P+       +V         V    L A+ A        M  +
Sbjct: 85  PRVRRVLDPLLLSYYAVPVFVLYPILIVVLGLNRWPLVGIGFLFAVVA--------MAVN 136

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L  +PR L   +R  RL+ + +   + +P S+P +   + +++   +  VVA E +
Sbjct: 137 TLNGLERVPRVLLRTARVCRLNTFDEIRLITLPSSLPFVFTGIKLTVVYAFIAVVAGEFV 196

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + G       G G  IA A    D   +   M+ ML  +   + LL
Sbjct: 197 LSGS------GFGYQIAFAYNNFDNPTMYGLMVLMLAFVSSLNALL 236


>gi|110635291|ref|YP_675499.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286275|gb|ABG64334.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 280

 Score = 76.1 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 10/184 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     + +   IT    +   I+   I + +G  +G    ++  ++PF     + P   
Sbjct: 69  WLWSGTLAFHASITATEALTGFILGGFIGMIMGTILGRSQGLAELLEPFIMAFYSLPKVA 128

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL V  +           + ++ F     +  N   G  +   +   +          
Sbjct: 129 LAPLFVMWLGIGISMKITLTAAIVFF----LVFLNTYTGVRSVSKELVTIMHLMGAKERH 184

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               +++P    +   G   +   A   +IV E+ +         GLG  ++ S  +   
Sbjct: 185 ILLKVVIPSALSWVFAGLKVSVPYALIGAIVGELIA------SNRGLGYLLSSSAGQFDT 238

Query: 553 PEVV 556
             V 
Sbjct: 239 AGVF 242



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 78/221 (35%), Gaps = 14/221 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L AF+ +    +  L      + P  I  ++   L   +L  +AS T    L+  ++   
Sbjct: 36  LAAFLGIWEFASGRLVAEFFVSKPSKIFAVLNEWLWSGTLAFHASITATEALTGFILGGF 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +  T+  +S+ L  +L P +    S+P +      V++       K+        F 
Sbjct: 96  IGMIMGTILGRSQGLAELLEPFIMAFYSLPKVALAPLFVMWLGIGISMKITLTAAIVFFL 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F         + Y  + ++ ++L  +              + +P ++  +   + +S+ 
Sbjct: 156 VF--------LNTYTGVRSVSKELVTIMHLMGAKERHILLKVVIPSALSWVFAGLKVSVP 207

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 +  E+I          G+G  ++ +  + D   + 
Sbjct: 208 YALIGAIVGELIASN------RGLGYLLSSSAGQFDTAGVF 242


>gi|304394554|ref|ZP_07376473.1| ABC transporter permease [Ahrensia sp. R2A130]
 gi|303293215|gb|EFL87596.1| ABC transporter permease [Ahrensia sp. R2A130]
          Length = 298

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 79/201 (39%), Gaps = 5/201 (2%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W++ G +V          +I+   IT+   ++  +I + + + + + I     + 
Sbjct: 69  VAAEIWKTTGAMVLKGRPFSKRSLIYHAWITLSATLLGFLIGTALGVALAVGIVHNRAMD 128

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+       P     P+++  ++   ++  L  +L+  + + + ++  ++AG  A 
Sbjct: 129 KSVMPWVITSQTIPILAIAPMIIVVLNAAGISGLLPKALISTYLSFFPVVVGMVAGLRAP 188

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                ++  ++  +  + +  + LP   PY  T    A   +   +IV E+ +       
Sbjct: 189 ERADLDLMHTYSASRAQTFWKLRLPASLPYLFTSLKIAMAISLVGAIVGEMPTGA----- 243

Query: 536 TTGLGAYIAESTEKGSFPEVV 556
             GLGA +   +  G   ++ 
Sbjct: 244 VAGLGARLLAGSYYGQTIQIW 264



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 67/187 (35%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +A  T    L   +I        A     +R +   ++P +   Q+IPIL  
Sbjct: 87  FSKRSLIYHAWITLSATLLGFLIGTALGVALAVGIVHNRAMDKSVMPWVITSQTIPILAI 146

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V         ++   L + +  F    + +   M   L    R   ++  ++  S
Sbjct: 147 APMIIVVLNAAGISGLLPKALISTYLSF----FPVVVGMVAGLRAPERADLDLMHTYSAS 202

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P S+P L  ++ ++M+      +  EM         + G+G+ +      
Sbjct: 203 RAQTFWKLRLPASLPYLFTSLKIAMAISLVGAIVGEM-----PTGAVAGLGARLLAGSYY 257

Query: 236 QDLLAIL 242
              + I 
Sbjct: 258 GQTIQIW 264


>gi|262282375|ref|ZP_06060143.1| phosphate ABC transporter, permease PstC [Streptococcus sp.
           2_1_36FAA]
 gi|262261666|gb|EEY80364.1| phosphate ABC transporter, permease PstC [Streptococcus sp.
           2_1_36FAA]
          Length = 305

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 89/228 (39%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S +    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSAVIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD---------- 217
            S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V             
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTSLTTP 248

Query: 218 ----TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               T +   GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLIMSLAFNSVIKLITK 296



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 75/213 (35%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSAVIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSIFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L    P   T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +LIM  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLIMSL 285


>gi|30249181|ref|NP_841251.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718]
 gi|30180500|emb|CAD85107.1| putative ABC transporter, permease protein, cysTW family
           [Nitrosomonas europaea ATCC 19718]
          Length = 262

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 94/238 (39%), Gaps = 14/238 (5%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           L +G      PR     +   +   S  Q  + T  R L     +L        +A  S 
Sbjct: 37  LYYGELILPNPRITFQTLAGLIAEGSAWQELTITARRALIGFGAALAVGSTLGLVAGLSM 96

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
              M+  PI+ ++   P + +L   +++F N             IF +F + +  +    
Sbjct: 97  TALMMSRPIVTVLIGTPPIAWLVLALLWFGNGDGTP--------IFTVFVACMPIVFVGA 148

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
                 +   L +V+ ++RL    +F  + +P  +  L    + ++   W  VV +E++ 
Sbjct: 149 MLGARTLDGQLGDVATAYRLPPLMRFTDIVLPHVVSYLFPAWITALGISWKVVVMAELLA 208

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
             D      G+G+ +A++    D  A L  +  ++G++   + LL  P+     ++R+
Sbjct: 209 SSD------GVGAALAVSRSHLDTAATLAWITAVVGLLLAVEYLLLEPIKREIERWRV 260



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 10/178 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT  R ++    A  +   +G+  G         +P   +L   P   +  L +      
Sbjct: 69  ITARRALIGFGAALAVGSTLGLVAGLSMTALMMSRPIVTVLIGTPPIAWLVLALLWFGNG 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
              P       +       +    + GA        +VA+++ +     +  I+LP +  
Sbjct: 129 DGTP----IFTVFVACMPIVFVGAMLGARTLDGQLGDVATAYRLPPLMRFTDIVLPHVVS 184

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           Y     ITA G +W   +++E+ +       + G+GA +A S         +  +  +
Sbjct: 185 YLFPAWITALGISWKVVVMAELLA------SSDGVGAALAVSRSHLDTAATLAWITAV 236


>gi|308175124|ref|YP_003921829.1| glycine betaine/carnitine/choline ABC transporter OpuCD [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607988|emb|CBI44359.1| glycine betaine/carnitine/choline ABC transporter OpuCD [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555093|gb|AEB25585.1| glycine betaine/carnitine/choline ABC transporter OpuCD [Bacillus
           amyloliquefaciens TA208]
 gi|328913448|gb|AEB65044.1| glycine betaine/carnitine/choline ABC transporter OpuCD [Bacillus
           amyloliquefaciens LL3]
          Length = 224

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 76/205 (37%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   + Q   R  L  +  ++ + +         A+ R+L   +  + +++Q++P L 
Sbjct: 12  SQNGAYVLQEFYRHFLMSVYGVLFAAIVGIPLGIFIARYRKLSGWVFAVTNVIQTVPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I ++F   +  +  + Y  + +I     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKFQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ A      ++ +   L+
Sbjct: 177 ATNGTAIILAGAIPTALMAVIADLV 201



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ A+I+ IP+GI+I     +S  +     ++   PA     +++  +         
Sbjct: 30  VYGVLFAAIVGIPLGIFIARYRKLSGWVFAVTNVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G ++  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA   A   + +      G       GLG  I   +   +   ++L   I    +  + 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDIIVRGSNATNGTAIILAGAIPTALMAVIA 198

Query: 571 RFL 573
             +
Sbjct: 199 DLV 201


>gi|288962225|ref|YP_003452520.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288914491|dbj|BAI75976.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 294

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 76/206 (36%), Gaps = 5/206 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   +  +    +  +++   +T    +    +  ++ + +   I     + S + P+  
Sbjct: 74  LYNSLTGYPVTSIRNLLYHTGVTAGAALAGFAMGVVLGVALAAGIVQARTLESSLMPWVI 133

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P++V  +        L  +++ ++   + I   ++ G  +      ++ 
Sbjct: 134 ASQTVPILAIAPMIVVILGNLGFTGLLPKAIIAMYLCFFPITIGMVKGLRSADPLTLDLM 193

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++     + +R + LP   PY  T    A   +   +IV+E+ + G       GLGA +
Sbjct: 194 RTYSAGTAQTFRLLRLPASLPYLFTSLKIAVAASVVGAIVAELPTGGQ-----AGLGARL 248

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
              +  G   ++   +++     + L
Sbjct: 249 LSGSYYGQTVQIWSALVMAALLGVTL 274



 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 9/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
             + +L  +   T    L+   + ++     A    ++R L   L+P +   Q++PIL  
Sbjct: 84  TSIRNLLYHTGVTAGAALAGFAMGVVLGVALAAGIVQARTLESSLMPWVIASQTVPILAI 143

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               VV   NL    ++   + A++  F    + +T  M + L +      ++ R++   
Sbjct: 144 APMIVVILGNLGFTGLLPKAIIAMYLCF----FPITIGMVKGLRSADPLTLDLMRTYSAG 199

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q F  L +P S+P L  ++ ++++      + +E+   G       G+G+ +      
Sbjct: 200 TAQTFRLLRLPASLPYLFTSLKIAVAASVVGAIVAELPTGGQA-----GLGARLLSGSYY 254

Query: 236 QDLLAILYAMLTMLGVIFLY 255
              + I  A++    +    
Sbjct: 255 GQTVQIWSALVMAALLGVTL 274


>gi|229135631|ref|ZP_04264409.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196]
 gi|228647811|gb|EEL03868.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196]
          Length = 167

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 12/163 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIA 470
           P ++  + P+  +L A P     P+++         PN+  S+ M +  +    +  + +
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYS 56

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                 +++ +V  +F    W+ ++++ILP  FP  ++      G +W   I  E+    
Sbjct: 57  AFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVIFGELL--- 113

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   GLG  I+   +  +F  V+L V++ C     +  F+
Sbjct: 114 ---VSKQGLGYLISYGFQVFNFTLVLLSVMLTCVLATLMYVFV 153



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 65/166 (39%), Gaps = 14/166 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L  VL P L ++ ++P +      +V F       +    + +I              
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV-------- 53

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +Y +   +  +  +V  +F  + WQ + ++ +P S P ++  + +++   W  V+  E++
Sbjct: 54  IYSAFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVIFGELL 113

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V         G+G  I+   +  +   +L +++    +  L    +
Sbjct: 114 V------SKQGLGYLISYGFQVFNFTLVLLSVMLTCVLATLMYVFV 153


>gi|118467878|ref|YP_890708.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169165|gb|ABK70061.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner
           membrane subunit, putative [Mycobacterium smegmatis str.
           MC2 155]
          Length = 259

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 10/259 (3%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           +       +  +   V+ +L IF       V           +           +     
Sbjct: 7   WQRQLRSQRAAALATVAAILTIFGAWQCAVVIGNRVPPLSETVRRLGAESAAGELWGNLA 66

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           I+M R  + ++ A ++   +G+ +G                 A PA ++  L      + 
Sbjct: 67  ISMNRFALGLVAALVVGAAIGVLMGLSRIADLAFSDLNAAALAIPAVIWALLTTMWFGFG 126

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L P     + +      +++ N+     A P +   +A SF +   R  R I+ P +  
Sbjct: 127 WLTP----VVTVFLSGLPFVIVNIAKATRAVPVELVLMARSFGVPRARVLREIVAPAVAG 182

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V     A   AWN  +++E          T+G+G       +       +  VL+   
Sbjct: 183 STVAAVRFAIMSAWNGLLLAEWFG------STSGVGWRARYWYDANQLDGFLAWVLVFIL 236

Query: 565 FVLALNRFLWHPLYLYGTR 583
            ++  +  +  P+  + TR
Sbjct: 237 LLVVADLLILGPIERFTTR 255



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 84/247 (34%), Gaps = 14/247 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            + + G     +          + V  +        L    + +  R    +V +L+   
Sbjct: 25  ILTIFGAWQCAVVIGNRVPPLSETVRRLGAESAAGELWGNLAISMNRFALGLVAALVVGA 84

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L   SR   +    +     +IP + +   T ++F            L  +  +F 
Sbjct: 85  AIGVLMGLSRIADLAFSDLNAAALAIPAVIWALLTTMWFG--------FGWLTPVVTVFL 136

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           S +  +  ++ ++   +P +L  ++RSF +   +    +  P      V  +  ++   W
Sbjct: 137 SGLPFVIVNIAKATRAVPVELVLMARSFGVPRARVLREIVAPAVAGSTVAAVRFAIMSAW 196

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             ++ +E            G+G           L   L  +L  + ++ + D L+  P+ 
Sbjct: 197 NGLLLAEWFG------STSGVGWRARYWYDANQLDGFLAWVLVFILLLVVADLLILGPIE 250

Query: 265 VWSNKFR 271
            ++ ++R
Sbjct: 251 RFTTRWR 257


>gi|300715963|ref|YP_003740766.1| glycine/betaine ABC transporter permease [Erwinia billingiae Eb661]
 gi|299061799|emb|CAX58915.1| Putative ABC-type proline/glycine betaine transport systems,
           permease component, YehY [Erwinia billingiae Eb661]
          Length = 386

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 80/205 (39%), Gaps = 15/205 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q  SR  L ++  ++ +L          AK   +   +  +L+++Q++P +      +  
Sbjct: 177 QAFSRHLLLLVGTLIPTLAIGIPLGWWCAKKAAVQSPVFAVLNVIQTVPSVALFGLLIAP 236

Query: 123 FMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              L       +EL         A+ A+    +  +  S+   L  +P+++ E +    +
Sbjct: 237 LAGLARAFPWLSELGISGIGMAPALIALVLYALLPLVRSVVAGLQQVPKEVIETAEGMGM 296

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q FW   VP ++P L+  + +         V + +I  G       G G+ I   + 
Sbjct: 297 TRSQIFWQAEVPLALPVLLTGLRVIAVQTVGMAVIAALIGAG-------GFGAIIFQGLL 349

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              L  +L  ++ ++ +  + D L 
Sbjct: 350 SSALELVLLGVIPVIAMAVVIDALF 374



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +V  +I    I IP+G W   +  + S +     ++   P+   F L+++ ++    
Sbjct: 183 LLLLVGTLIPTLAIGIPLGWWCAKKAAVQSPVFAVLNVIQTVPSVALFGLLIAPLAGLAR 242

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ +V+AG    P +  E A    +T  + +
Sbjct: 243 AFPWLSELGISGIGMAPALIALVLYALLPLVRSVVAGLQQVPKEVIETAEGMGMTRSQIF 302

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
               +P   P  +TG           ++++ +   G       G GA I +     +   
Sbjct: 303 WQAEVPLALPVLLTGLRVIAVQTVGMAVIAALIGAG-------GFGAIIFQGLLSSALEL 355

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 356 VLLGVIPVIAMAVVIDALF 374


>gi|312865105|ref|ZP_07725333.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus downei F0415]
 gi|311099216|gb|EFQ57432.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus downei F0415]
          Length = 221

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 71/180 (39%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++++ +       L A+  RL  V++ I +++Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLLAAIVGIPLGILIARRSRLRSVVMGIANVLQTIPSLAMISILMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  + ++  DL + +R   ++  Q+ + + +
Sbjct: 86  GM--------KTVVATVFLYSLLPIIGNTYSGIRSVNDDLVDAARGMGMTKLQRLFMVEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVIMAGIR-------NALVIAVGITAIGAFVGGGGLGDIIVRGTNATNGGAIILAG 190



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 8/167 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+   Y  +H         I    I+++     +++A+I+ IP+GI I  R  + S +  
Sbjct: 7   WEQFFYYFSHNGDYVFTQFIRHFLISIY----GVLLAAIVGIPLGILIARRSRLRSVVMG 62

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A +L   P+     +++  +          +   +   +   I+ N  +G  +  +D  
Sbjct: 63  IANVLQTIPSLAMISILMLGLGLG----MKTVVATVFLYSLLPIIGNTYSGIRSVNDDLV 118

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           + A    +T  +    + +P      + G   A   A   + +    
Sbjct: 119 DAARGMGMTKLQRLFMVEIPLSLSVIMAGIRNALVIAVGITAIGAFV 165


>gi|257899484|ref|ZP_05679137.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
 gi|257837396|gb|EEV62470.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
          Length = 220

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      + G   A   A   + +      G       GLG  I   T        ++
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 188

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 189 AGALPTALMAIITDWLL 205


>gi|296330441|ref|ZP_06872921.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675987|ref|YP_003867659.1| choline ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152444|gb|EFG93313.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414231|gb|ADM39350.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 217

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           L A+++ +L       +  + ++    ++ I++I+Q++P L
Sbjct: 8   LQTNGGELLYKTYEHITISLIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  ++   + +P + P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTPAEQVRLVELPLAAPVIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D +L
Sbjct: 173 NLYQPEYIIGGAVPVTILAIVIDYVL 198



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+  ++ +P+G+ +      +  I     ++   P+       +  +        +
Sbjct: 27  LIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSLAILAFFIPLLGVG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + + F +   IL N   G      +  E      +T     R + LP   P  + G 
Sbjct: 83  PAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIGMTPAEQVRLVELPLAAPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++     G       GLG YI           ++ G + +    + ++
Sbjct: 143 RTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILAIVID 195

Query: 571 RFL 573
             L
Sbjct: 196 YVL 198


>gi|82543550|ref|YP_407497.1| transport system permease protein [Shigella boydii Sb227]
 gi|218554696|ref|YP_002387609.1| putative ABC transporter permease [Escherichia coli IAI1]
 gi|307311290|ref|ZP_07590934.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|81244961|gb|ABB65669.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|218361464|emb|CAQ99053.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli IAI1]
 gi|306908796|gb|EFN39293.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|315061441|gb|ADT75768.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|323377978|gb|ADX50246.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|332097550|gb|EGJ02530.1| inner membrane ABC transporter permease protein yehY [Shigella
           boydii 3594-74]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|209550617|ref|YP_002282534.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536373|gb|ACI56308.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 314

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 78/214 (36%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 90  SNRSLIYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 149

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 150 PMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 209

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+         + GI
Sbjct: 210 LDLMRTYYASPIQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGEL-----PTGAVAGI 264

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 265 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 298



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 68/207 (32%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 93  SLIYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 152

Query: 438 VSCVSYYHLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N                  +L+  + + + +   ++ G  +      ++
Sbjct: 153 VIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 212

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +         G+G+ 
Sbjct: 213 MRTYYASPIQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----VAGIGSK 267

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 268 LLAGSYYSQTIDIWAALVAGSLLAGIL 294


>gi|116253461|ref|YP_769299.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258109|emb|CAK09210.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 309

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 78/214 (36%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNAVAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+         + GI
Sbjct: 205 LDLMRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGEL-----PTGAVAGI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 293



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPN---------------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N               +  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNAVAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +         G+G+ 
Sbjct: 208 MRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----VAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTIDIWAALVAGSLLAGIL 289


>gi|302387323|ref|YP_003823145.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302197951|gb|ADL05522.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 265

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 14/194 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  L +  +  +   + A L   SR +  VL P L ++ S+P        +V+ 
Sbjct: 75  HIGVTVMETLISFSLVTISGLLIAVLLWSSRSVSEVLEPYLVMLNSLPKSALAPILIVWL 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N             I A  +  V+    +++     I  D+ ++  S         + +
Sbjct: 135 GNNI--------KTIIVASISVAVFGCIMTLHTGFTQIDPDMIKLIYSLGGKKKDVLFKV 186

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ N  +++      V+  E +          G+G  I    +   +  ++ 
Sbjct: 187 LLPGSVPLIISNTKVNIGLCLVGVIIGEFLAANK------GLGYLIIYGSQVFQMDLVVM 240

Query: 244 AMLTMLGVIFLYDQ 257
           +++ +  V  +  Q
Sbjct: 241 SIVILCIVSAILYQ 254



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 70/192 (36%), Gaps = 10/192 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T+   ++   + +I  + + + +     +S  ++P+  +L + P +   P++
Sbjct: 71  SIFMHIGVTVMETLISFSLVTISGLLIAVLLWSSRSVSEVLEPYLVMLNSLPKSALAPIL 130

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + +FG     +  +  G +    D  ++  S           +
Sbjct: 131 IVWLGNNIKTIIVASISVAVFGC----IMTLHTGFTQIDPDMIKLIYSLGGKKKDVLFKV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LPG  P  ++      G      I+ E  +         GLG  I   ++      VV+
Sbjct: 187 LLPGSVPLIISNTKVNIGLCLVGVIIGEFLA------ANKGLGYLIIYGSQVFQMDLVVM 240

Query: 558 GVLIMCCFVLAL 569
            ++I+C     L
Sbjct: 241 SIVILCIVSAIL 252


>gi|260856104|ref|YP_003229995.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|260868833|ref|YP_003235235.1| putative transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|257754753|dbj|BAI26255.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|257765189|dbj|BAI36684.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|323152357|gb|EFZ38646.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli EPECa14]
 gi|323176975|gb|EFZ62565.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1180]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|146311577|ref|YP_001176651.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145318453|gb|ABP60600.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 245

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  + + S+M  +LL       L ++   R +   ++ I ++  ++P L  L  
Sbjct: 47  LLYLGQQHMILVFSSMFFALLVGIPSGILLSRPAARGVAEYVMQIFNVGNTLPPLAVLAL 106

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 107 AMVVLGIG--------DKPAIVALFLASLLPIVRNTYAGLCSVPASLLEAANGIGMTKWQ 158

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + + + +P ++P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 159 RLYQVEIPNALPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 211

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 212 PTLILGAAATALFALILDTLL 232



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V  + + +A  + G  ++    + V  +++LG   M  V   +  A ++ IP GI +
Sbjct: 18  LLFVGAIVVVLALLTWGIGLDTIKARQV-DLLYLGQQHMILVFSSMFFALLVGIPSGILL 76

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 77  -SRPAARGVAEYVMQIFNVGNTLPPLAVLALAMVVLGIGDK----PAIVALFLASLLPIV 131

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+    + +P   P  ++G   A   A N      
Sbjct: 132 RNTYAGLCSVPASLLEAANGIGMTKWQRLYQVEIPNALPVMLSGIRIA--TAINVGTAPL 189

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G         G  I        FP ++LG      F L L+  L
Sbjct: 190 AFLIGASSY-----GELIFPGIYLNDFPTLILGAAATALFALILDTLL 232


>gi|87306663|ref|ZP_01088810.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
 gi|87290842|gb|EAQ82729.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
          Length = 255

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 15/260 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R+      LL  + +          I    +P           +   L      T +  
Sbjct: 6   QRVLLPTATLLIALAIWQTCVTKGK-IPPYLLPSPAAVGAAFYRNGADLWSGTLLTGVAA 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+    +++   + A L ++SR + +   P     Q++PI+    + V       P  ++
Sbjct: 65  LAGFAAAVVLGTLVALLFSQSRLIRLSGYPYAIFFQTVPIVAIAPWIVTLTGYGLPSVIV 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A + ++F I TS            + ++   L E+ R  R S WQ  W L  P ++  L
Sbjct: 125 VATIISLFPIITSATT--------GMLSVDHSLVELFRLHRASRWQTLWKLQFPTAIRYL 176

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TML 249
           V  M  S        +  E  V         G+G YI  +        +  AM+    + 
Sbjct: 177 VTGMKSSSGLAVVGAIVGEFFV--GYSGAQHGLGYYIRSSSDNLKTDELFAAMICCTLLG 234

Query: 250 GVIFLYDQLLFR-PMIVWSN 268
            V+F    LL R  +  W+ 
Sbjct: 235 VVVFAAINLLERFALRRWTE 254



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 13/201 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T    +     A ++   V +       I     P+A      P     P +V+   Y
Sbjct: 58  LLTGVAALAGFAAAVVLGTLVALLFSQSRLIRLSGYPYAIFFQTVPIVAIAPWIVTLTGY 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    + ++    + + I+ +   G  +  +   E+      + W+    +  P   
Sbjct: 118 GLPS----VIVVATIISLFPIITSATTGMLSVDHSLVELFRLHRASRWQTLWKLQFPTAI 173

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y VTG  ++ G A   +IV E            GLG YI  S++     E+   ++   
Sbjct: 174 RYLVTGMKSSSGLAVVGAIVGEFFVG--YSGAQHGLGYYIRSSSDNLKTDELFAAMICCT 231

Query: 564 CFVL-------ALNRFLWHPL 577
              +        L RF     
Sbjct: 232 LLGVVVFAAINLLERFALRRW 252


>gi|157156192|ref|YP_001463476.1| quaternary amine ABC transporter permease [Escherichia coli
           E24377A]
 gi|300818870|ref|ZP_07099075.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|157078222|gb|ABV17930.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E24377A]
 gi|300528489|gb|EFK49551.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|157151308|ref|YP_001450345.1| phosphate transport protein PstC [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157076102|gb|ABV10785.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 305

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S +    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSAVIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 243



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 63/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSAVIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSIFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L    P   T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 244


>gi|299533957|ref|ZP_07047316.1| probable ABC transporter permease protein [Comamonas testosteroni
           S44]
 gi|298718053|gb|EFI59051.1| probable ABC transporter permease protein [Comamonas testosteroni
           S44]
          Length = 262

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+A + +  +              P  +   +   L       +   T   +L  ++I  
Sbjct: 16  LVAVLAIWELAARQFGLSALVLPAPSAVALSLWSGLASGYFWPHLWATLQALLLGLLIGS 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               +     A+S  L  VL P + + Q +P L      V++F       V+   L   F
Sbjct: 76  AVGLLAGMALAESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFGMLPTVLITALICFF 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  +    L  +     ++ R    +  Q    L +P  +P ++  + +++
Sbjct: 136 --------PLMENTLTGLRQVDGQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAV 187

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                  V +E +          G+G+ +  A    D   +  A++ +  +  L  Q
Sbjct: 188 VLALVGAVVAEFMGASQ------GLGAVVIAAQGMMDTTLMFAALVLIAVMGLLLYQ 238



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +V      +A      + + + +  +         T+  +++ ++I S + +  G+ + 
Sbjct: 34  ALVLPAPSAVALSLWSGLASGYFWPHLW-------ATLQALLLGLLIGSAVGLLAGMALA 86

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   ++P+  +    P     PL V    +      L   L+      + ++ N +
Sbjct: 87  ESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFG----MLPTVLITALICFFPLMENTL 142

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G         ++      T  +    + LP   P  + G   A   A   ++V+E    
Sbjct: 143 TGLRQVDGQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAVVLALVGAVVAEFMG- 201

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 + GLGA +  +        +   ++++    L L
Sbjct: 202 -----ASQGLGAVVIAAQGMMDTTLMFAALVLIAVMGLLL 236


>gi|254416745|ref|ZP_05030495.1| ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196176485|gb|EDX71499.1| ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 213

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 76/204 (37%), Gaps = 15/204 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + Q           A++I++      + L  + R L + +V IL I+ +IP L  +
Sbjct: 7   NPEDIIQLLLEHLQMTSLAVLIAVAIALPLSVLITRYRWLSIPVVGILGILYTIPSLALI 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V                + + A+       +  +   +L +I   + E +R   ++ 
Sbjct: 67  ILLVPLLGLN--------RQSVVVAMILYTQVILVRNFLVALQSIDPKILEAARGMGMNA 118

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ++W++ +P  +P  +  + ++        + +  I          G+G  +   + + 
Sbjct: 119 WQRWWWVQIPLILPIGIAGIRLA-------TIVAIAISTIGAKFGAGGLGVLLFDGVSQS 171

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               I    +T+  + F  + +L 
Sbjct: 172 RYDKIWAGAITVAILAFALNGILL 195



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I L    +    + ++IA  I +P+ + I     +S  +     +L   P+     L+V
Sbjct: 11  IIQLLLEHLQMTSLAVLIAVAIALPLSVLITRYRWLSIPVVGILGILYTIPSLALIILLV 70

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +    + + MI  TQ  ++ N +    +      E A    +  W+ W ++ 
Sbjct: 71  PLLGLNRQS----VVVAMILYTQVILVRNFLVALQSIDPKILEAARGMGMNAWQRWWWVQ 126

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P I P  + G   A       +IV+   S         GLG  + +   +  + ++  G
Sbjct: 127 IPLILPIGIAGIRLA-------TIVAIAISTIGAKFGAGGLGVLLFDGVSQSRYDKIWAG 179

Query: 559 VLIMCCFVLALNRFL 573
            + +     ALN  L
Sbjct: 180 AITVAILAFALNGIL 194


>gi|111115041|ref|YP_709659.1| phosphate ABC transporter, permease protein [Borrelia afzelii PKo]
 gi|110890315|gb|ABH01483.1| phosphate ABC transporter, permease protein [Borrelia afzelii PKo]
          Length = 514

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   ++    +L   +
Sbjct: 287 ILSIPRDSGAYGGISYLIINTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSV 346

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ ++   ++   + +   I       +  +  ++   IP+ 
Sbjct: 347 DILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKS 402

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 403 YKYASFALGANKTETIILIMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 451

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 452 MGTNLGLATNLNEPSRTLTVHLLML 476



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 298 GGISYLIINTFYVILLTTAISICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIF 357

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+          P  +K  + +    
Sbjct: 358 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEETFKTIPKSYKYASFALGAN 413

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  I++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 414 KTETIILIMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 473

Query: 544 AESTEKGSFPEVV--LGVLIMCCFVL-ALNRFLWHPLYL 579
               ++G   +      +L++   ++   ++FL + LY 
Sbjct: 474 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 512


>gi|78060663|ref|YP_367238.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965213|gb|ABB06594.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 238

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 68/157 (43%), Gaps = 12/157 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILD 105
           +     +     L  YA +  L ++ +M +++        L ++ R   +    +  + +
Sbjct: 26  IGADTFSQRADDLAYYAGQHMLLVVYSMALAIAVGVPAGVLLSRPRFQHQAERFMQ-VFN 84

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I  +IP L  L   +  F            + AI A+F + +  +T + Y+ + N+P  L
Sbjct: 85  IGNTIPSLAVLAIALGIFGIG--------NVPAIVALFLASLLPITRNTYEGMKNVPAAL 136

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            E ++   ++GWQ    + +P ++P +V  +  +++ 
Sbjct: 137 REAAKGIGMTGWQSLVRVELPDALPIIVGGVRTALAI 173



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 15/224 (6%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               + IAW     I      Q    + +     M  VV  + +A  + +P G+ +  RP
Sbjct: 12  LIAIVAIAWALARGIGADTFSQRADDLAYYAGQHMLLVVYSMALAIAVGVPAGVLL-SRP 70

Query: 413 HISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + + F Q+       P+     + +          N+   + +   +   I  N  
Sbjct: 71  RFQHQAERFMQVFNIGNTIPSLAVLAIALGIFGIG----NVPAIVALFLASLLPITRNTY 126

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P   +E A    +TGW+    + LP   P  V G  TA       + ++     
Sbjct: 127 EGMKNVPAALREAAKGIGMTGWQSLVRVELPDALPIIVGGVRTALAINVGTAPLA----- 181

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +    LG+ I       + P ++LG  +     L L+  +
Sbjct: 182 --YLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALVLDGIV 223


>gi|331683807|ref|ZP_08384403.1| putative transport system permease protein [Escherichia coli H299]
 gi|331078759|gb|EGI49961.1| putative transport system permease protein [Escherichia coli H299]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDTLF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDTLF 372


>gi|297616824|ref|YP_003701983.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297144661|gb|ADI01418.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 207

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 78/197 (39%), Gaps = 15/197 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           ++   + +     L+ + +++L       L   +R    ++V   D+MQ+IP        
Sbjct: 3   NIWLLSIQHLELTLAGVGLAILIGVPIGYLITGNRWAAQLVVGFTDVMQTIPA------- 55

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +  + L+   +   +   I A+    +  +  + Y  +  I   L E ++   ++ WQ 
Sbjct: 56  -LALLALFMLWLGLGDTPLIMALLVYSLLPIVRNTYIGIIGIDGALIEAAKGMGMTRWQL 114

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  + ++        V +  I     +I   G+G+ I   +++ +  
Sbjct: 115 LRMVQLPLALPVIMAGIRVA-------TVTAIGIAAIGVLIGAGGLGAPIWRGMQQMNTA 167

Query: 240 AILYAMLTMLGVIFLYD 256
            IL   +    +  + D
Sbjct: 168 MILSGAVPAALLAVVSD 184



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + +A +I +P+G  I      +  +  F  ++   PA     L +  +         
Sbjct: 16  LAGVGLAILIGVPIGYLITGNRWAAQLVVGFTDVMQTIPALALLALFMLWLGLGDT---- 71

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L + ++  +   I+ N   G         E A    +T W+  R + LP   P  + G 
Sbjct: 72  PLIMALLVYSLLPIVRNTYIGIIGIDGALIEAAKGMGMTRWQLLRMVQLPLALPVIMAGI 131

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + +  +   G       GLGA I    ++ +   ++ G +      +  +
Sbjct: 132 RVATVTAIGIAAIGVLIGAG-------GLGAPIWRGMQQMNTAMILSGAVPAALLAVVSD 184


>gi|241205986|ref|YP_002977082.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859876|gb|ACS57543.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 309

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 78/214 (36%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNAVAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+         + GI
Sbjct: 205 LDLMRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGEL-----PTGAVAGI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 293



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPN---------------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N               +  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNAVAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +         G+G+ 
Sbjct: 208 MRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----VAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTIDIWAALVAGSLLAGIL 289


>gi|218672202|ref|ZP_03521871.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rhizobium
           etli GR56]
          Length = 193

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 73/175 (41%), Gaps = 6/175 (3%)

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++A +  +   I++     I     P A +L   P     PL++     Y  +  + L +
Sbjct: 1   MLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILI----YAPSTQVALLI 56

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                  + IL N++ G  +  ++   +   +  + W+   ++ LP   PY++TG     
Sbjct: 57  CAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLFFLKLPAAQPYFMTGLRIGG 116

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G A  A++V+E A+          L   + E+  + + P +   +L++    +A+
Sbjct: 117 GLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAI 169



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 10/179 (5%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++L+    +A    +SR + +   P+  I+Q  PI+      ++Y            ++
Sbjct: 1   MLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIY--------APSTQV 52

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A +   F    + +  +M Q L ++  +L  +   +  S WQ  ++L +P + P  +  +
Sbjct: 53  ALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQTLFFLKLPAAQPYFMTGL 112

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +         V +E             +   +  A    ++  +  A+L +  +    
Sbjct: 113 RIGGGLALIAAVVAEFAAGSAGAGSG--LAFRLLEAQYRLNIPRLFAALLMLSLLGVAI 169


>gi|218672871|ref|ZP_03522540.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli GR56]
          Length = 309

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 78/214 (36%), Gaps = 16/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L      +L   + A L   +R +   L+P L   Q+IPIL   
Sbjct: 85  SNRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAEL-----------AAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
              V+   N+  G    A L           +          + +   M + L +     
Sbjct: 145 PMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMH 204

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            ++ R++  S  Q FW L VP S+P L  +M ++++      +  E+         + GI
Sbjct: 205 LDLMRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGEL-----PTGAVAGI 259

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           GS +         + I  A++    +  +   ++
Sbjct: 260 GSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIV 293



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 68/207 (32%), Gaps = 20/207 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++      ++ I + + I     +   + P+       P     P++
Sbjct: 88  SLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMI 147

Query: 438 VSCVSYYHLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           V          N                  +L+  + + + +   ++ G  +      ++
Sbjct: 148 VIISYNVLTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDL 207

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +++ +  + +  + +P   P+  T    A   +   +IV E+ +         G+G+ 
Sbjct: 208 MRTYYASPMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----VAGIGSK 262

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +   +      ++   ++        L
Sbjct: 263 LLAGSYYSQTIDIWAALVAGSLLAGIL 289


>gi|254427673|ref|ZP_05041380.1| ABC transporter, permease protein, putative [Alcanivorax sp. DG881]
 gi|196193842|gb|EDX88801.1| ABC transporter, permease protein, putative [Alcanivorax sp. DG881]
          Length = 272

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+   + IS L   +          +     P++  +  +P +  L    + F 
Sbjct: 76  TMASLQRLAIGVGISALVALMVGIGNGTIPLIRATFSPLVTGLSLVPPMAILPVLFIVFG 135

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     ELA +  I       M   + Q    IP +     ++   + WQ    L 
Sbjct: 136 LG--------ELAKVMLIIIGITPFMIRDLQQRALEIPAEQIIKMQTLGANTWQIITRLV 187

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P  MP L+  + +S+   W F++A+E I   D      G+G  I L  +   +  IL  
Sbjct: 188 WPQLMPRLIGVVRLSLGPAWLFLIAAEAIAATD------GLGYRIFLVRRYLAMDVILPY 241

Query: 245 MLTMLGVIFLYDQLLFRP 262
           ++ +  + F  D +L R 
Sbjct: 242 VMWITLLAFAIDFILSRY 259



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++++ + VGI  G  P I +   P    L+  P     P++      
Sbjct: 77  MASLQRLAIGVGISALVALMVGIGNGTIPLIRATFSPLVTGLSLVPPMAILPVLFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +L+I G   +++ ++   A   P +      +     W+    ++ P + 
Sbjct: 137 GEL----AKVMLIIIGITPFMIRDLQQRALEIPAEQIIKMQTLGANTWQIITRLVWPQLM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +       T GLG  I       +   ++  V+ + 
Sbjct: 193 PRLIGVVRLSLGPAWLFLIAAEAIA------ATDGLGYRIFLVRRYLAMDVILPYVMWIT 246

Query: 564 CFVLALNRFL 573
               A++  L
Sbjct: 247 LLAFAIDFIL 256


>gi|239909235|ref|YP_002955977.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239799102|dbj|BAH78091.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 254

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 10/204 (4%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T  R V  ++ A ++  P+G+ +G    +S+ + P  +L+   P     P 
Sbjct: 48  GTLPAQAGETFARAVAGLLAALVLAGPLGLGMGTSRRLSALLTPAVELVRPVPPPAVIPA 107

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             +++F   + IL   + GA      F+  A+++ +   +    
Sbjct: 108 AMLLLGIG----TSMKLSVIVFACFFPILVGAVDGARHVEPGFRLTAAAYGLRRSQLLFG 163

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P    G  TA   A   +++SE+         ++G+G YI       + PE+ 
Sbjct: 164 VILPAAGPSLAAGFRTAVPMALIVAVLSEMVG------ASSGIGHYILRMQRTFAIPEMY 217

Query: 557 LGVLIMCCFVLALNRFLWHPLYLY 580
            GV  +    L  N  +   L   
Sbjct: 218 AGVAWLGILGLGCNLAVERGLSRL 241



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRM 72
           +    I  L A   V   ++      +    P   +  V   L V  +LP  A  T  R 
Sbjct: 2   KRLSGIIVLCALAGVWECVSRAGLVSKLYFPPVSTIAAVFWELTVSGTLPAQAGETFARA 61

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++ ++ +L+           SRRL  +L P +++++ +P    +   ++        K+ 
Sbjct: 62  VAGLLAALVLAGPLGLGMGTSRRLSALLTPAVELVRPVPPPAVIPAAMLLLGIGTSMKLS 121

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A  F I    V            ++       + ++ L   Q  + + +P + P L
Sbjct: 122 VIVFACFFPILVGAV--------DGARHVEPGFRLTAAAYGLRRSQLLFGVILPAAGPSL 173

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 ++       V SEM+          GIG YI    +   +  +   +  +  + 
Sbjct: 174 AAGFRTAVPMALIVAVLSEMVGASS------GIGHYILRMQRTFAIPEMYAGVAWLGILG 227

Query: 253 FLYDQLLFR---PMIVWSNKFR 271
              +  + R    ++ W   ++
Sbjct: 228 LGCNLAVERGLSRLLRWHEGWK 249


>gi|300917031|ref|ZP_07133726.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300415706|gb|EFJ99016.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|193070489|ref|ZP_03051429.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|192956183|gb|EDV86646.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|323171781|gb|EFZ57425.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli LT-68]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|307353630|ref|YP_003894681.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanoplanus petrolearius DSM 11571]
 gi|307156863|gb|ADN36243.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanoplanus petrolearius DSM 11571]
          Length = 658

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 80/495 (16%), Positives = 163/495 (32%), Gaps = 51/495 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L  L AM+I+       A   ++  S R+  V+ P ++++  IP + +    L     
Sbjct: 91  TLLVTLGAMIIAAPLGIGSAIYISEIASSRIRSVIKPAVELLAGIPSVVYGFFGLVILTD 150

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +        LA    +    +  +      ++  +P +    S     + WQ   
Sbjct: 151 WLRITFDLATGECWLAGSILLGIMALPTIISVSEDAINAVPDNFRRGSLGLGATYWQTIS 210

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------------GIGSY 228
            + VP ++ G+   +++ M       +A  M+     +IP P              +G  
Sbjct: 211 KVIVPAALSGITAAIILGMGRAIGETMAVMMVTGNSAIIPDPIYNIFSPVRTLTGTLGIE 270

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV--- 285
           +       +    L+ +  +L VI L   L  R +I   N+ RL+ T       S     
Sbjct: 271 MGEVAVGSEHYHALFGVALLLLVITLVVNLSARHII---NRIRLKGTGSNNKGRSKFSLP 327

Query: 286 -LYLFRKTNFLR-FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM 343
               F+ +   +  + Y+    F      +     T  V      + +LQ    +++  +
Sbjct: 328 NRDAFKLSERSKERLKYAVIVVFLLCLLYINIFLCTAAVALILLWKFWLQSLDPKKMQKL 387

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-------------LYVIWLGCITMFRV 390
             +  +  +  V + +       I                        +      T++ V
Sbjct: 388 AYVLLYMSIGIVLVVLGIILYDIISKGLPAMSWEFLTGYPKDLGREGGIFPAIIGTLYLV 447

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLN 447
              I+ A  I +   I++      S           LL   P+ VF    +   ++  L 
Sbjct: 448 GGAILFALPIGVCAAIYLVEYTKESRITSIIRSGVDLLNGTPSIVF---GLFGFAFLVLF 504

Query: 448 PNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            +  + LL    T   ++   I         + P+  +  + +   T W+  R ++L   
Sbjct: 505 LDFGVCLLAGMITLGLMVLPTIIRTTEEALKSVPDSLRHGSLALGATKWQTIRKVVLSPA 564

Query: 503 FPYYVTGAITACGGA 517
            P  +TG I + G A
Sbjct: 565 APGIITGTILSIGRA 579



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 6/184 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLF 82
             ++V+GII   +       +  + +   P  L     +      T   +  A++ +L  
Sbjct: 398 IVLVVLGIILYDIISKGLPAMSWEFLTGYPKDLGREGGIFPAIIGTLYLVGGAILFALPI 457

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A       K  R+  ++   +D++   P + F  F   + +      V    LA +
Sbjct: 458 GVCAAIYLVEYTKESRITSIIRSGVDLLNGTPSIVFGLFGFAFLVLFLDFGV--CLLAGM 515

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +  +  ++L ++P  L   S +   + WQ    + +  + PG++   ++S
Sbjct: 516 ITLGLMVLPTIIRTTEEALKSVPDSLRHGSLALGATKWQTIRKVVLSPAAPGIITGTILS 575

Query: 200 MSGG 203
           +   
Sbjct: 576 IGRA 579



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 14/209 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +  I  F +  G+    +     ++             +         +++ + A I
Sbjct: 41  VLTVFFILLFLLKDGIPAFASIGLYDFLFGSVWNPGGANPTYGTLPLWVDTLLVTLGAMI 100

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--FPLVVSC----VSYYHLN 447
           I  P+GI             I S I+P  +LLA  P+ V+  F LV+      +++    
Sbjct: 101 IAAPLGIGSAIYISEIASSRIRSVIKPAVELLAGIPSVVYGFFGLVILTDWLRITFDLAT 160

Query: 448 PNLWLSLLMIFG-TQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              WL+  ++ G      + +V     +A P++F+  +     T W+    +I+P     
Sbjct: 161 GECWLAGSILLGIMALPTIISVSEDAINAVPDNFRRGSLGLGATYWQTISKVIVPAALSG 220

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHL 534
                I   G A   ++   + +     +
Sbjct: 221 ITAAIILGMGRAIGETMAVMMVTGNSAII 249


>gi|16080425|ref|NP_391252.1| choline ABC transporter permease [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311322|ref|ZP_03593169.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315649|ref|ZP_03597454.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320565|ref|ZP_03601859.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324849|ref|ZP_03606143.1| choline ABC transporter membrane protein [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321312919|ref|YP_004205206.1| choline ABC transporter permease [Bacillus subtilis BSn5]
 gi|7404428|sp|Q45461|OPUBB_BACSU RecName: Full=Choline transport system permease protein opuBB
 gi|2293448|gb|AAC14357.1| transmembrane protein [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|2635885|emb|CAB15377.1| choline ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291485905|dbj|BAI86980.1| choline ABC transporter, membrane protein [Bacillus subtilis subsp.
           natto BEST195]
 gi|320019193|gb|ADV94179.1| choline ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 217

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           L A+++ +L       +  + ++    ++ I++I+Q++P L
Sbjct: 8   LQTNGGELLYKTYEHITISLIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  ++   + +P + P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTPAEQVRLVELPLAAPVIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D +L
Sbjct: 173 NLYQPEYIIGGAVPVTILAIVIDYVL 198



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 16/195 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +I+  ++ +P+G+ +      +  I     ++   P+       +  +        +
Sbjct: 27  LIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSLAILAFFIPLLGVG----KV 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + + F +   IL N   G      +  E      +T     R + LP   P  + G 
Sbjct: 83  PAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIGMTPAEQVRLVELPLAAPVIMAGI 142

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            T+       + ++     G       GLG YI           ++ G + +    + ++
Sbjct: 143 RTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILAIVID 195

Query: 571 RFLWHPLYLYGTRCL 585
             L         R L
Sbjct: 196 YVL-----AVAERKL 205


>gi|238799052|ref|ZP_04642511.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           mollaretii ATCC 43969]
 gi|238717105|gb|EEQ08962.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           mollaretii ATCC 43969]
          Length = 373

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 81/196 (41%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+ +V ++L       L  +SRR    +   L+I+Q+IP +      +     L     
Sbjct: 173 LLATVVPAVLIGIPLGLLCFRSRRFQGTIFSTLNIIQTIPSIALFGLLIAPLAGLAAAIP 232

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L ++P  + E ++   ++  Q F+++
Sbjct: 233 WLAEHGISGIGLAPAIVALVLYALLPLVRNVVAGLESVPDSVVESAQGMGMTRSQLFFWV 292

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 293 QIPIALPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIMFQGLLSSALDLVLL 345

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 346 GVIPVIVMAVMVDSLF 361



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  ++ A +I IP+G+           I     ++   P+   F L+++ ++    
Sbjct: 170 LQILLATVVPAVLIGIPLGLLCFRSRRFQGTIFSTLNIIQTIPSIALFGLLIAPLAGLAA 229

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  + P+   E A    +T  + +
Sbjct: 230 AIPWLAEHGISGIGLAPAIVALVLYALLPLVRNVVAGLESVPDSVVESAQGMGMTRSQLF 289

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ +P   P  ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 290 FWVQIPIALPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIMFQGLLSSALDL 342

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 343 VLLGVIPVIVMAVMVDSLF 361


>gi|238753364|ref|ZP_04614727.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           ruckeri ATCC 29473]
 gi|238708317|gb|EEQ00672.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           ruckeri ATCC 29473]
          Length = 384

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 104/257 (40%), Gaps = 19/257 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +SR I   ++ +LA + V+  I +LL G Q   +           +   +L Q+      
Sbjct: 127 LSRAIVSPVWRMLASLQVLLPIIVLLVGGQLDQLSLMKEYANRQDIFDDALWQH----LG 182

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +L+ ++ ++L       L  +S RL   +   L+I+Q++P +      +     L    
Sbjct: 183 ILLATIIPTVLLGIPLGLLCFRSYRLRTAIFSFLNIIQTVPSIALFGLLIAPLAGLAAAW 242

Query: 131 VIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              + L         AI A+    +  +  S+   L ++P  + E +R   ++  Q F+ 
Sbjct: 243 PWLSTLGISGIGLAPAIIALVLYALLPLVRSVVAGLESVPDSVMESARGMGMTRSQLFFR 302

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  + +         V + +I  G       G+G+ +   +    L  +L
Sbjct: 303 VQIPLALPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVL 355

Query: 243 YAMLTMLGVIFLYDQLL 259
             ++ ++ +  + D L 
Sbjct: 356 LGVIPVIVMAIVVDSLF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  II   ++ IP+G+       + + I  F  ++   P+   F L+++ ++    
Sbjct: 181 LGILLATIIPTVLLGIPLGLLCFRSYRLRTAIFSFLNIIQTVPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ +V+AG  + P+   E A    +T  + +
Sbjct: 241 AWPWLSTLGISGIGLAPAIIALVLYALLPLVRSVVAGLESVPDSVMESARGMGMTRSQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FRVQIPLALPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVIVMAIVVDSLF 372


>gi|25010308|ref|NP_734703.1| hypothetical protein gbs0234 [Streptococcus agalactiae NEM316]
 gi|77408835|ref|ZP_00785563.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77413732|ref|ZP_00789914.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|23094660|emb|CAD45879.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160223|gb|EAO71352.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77172566|gb|EAO75707.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|319744186|gb|EFV96554.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           agalactiae ATCC 13813]
          Length = 211

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ + +        +  +  ++  +++ I  ++Q+IP L  L   +  F         
Sbjct: 24  FFAIALGIAIAVPLGVVLTRFPKVAKIIIAIASMLQTIPSLALLALMIPLFGIG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             ++ AI A+F   +  +  + Y  + N+   L++ ++   +   Q  + + +P + P +
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYIGMNNVNPTLKDCAKGMGMKPIQSIFQVELPLATPII 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S      +   +  I  G       G+G  I   +       IL   + ++ + 
Sbjct: 136 MAGIRLSTIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPKLILGGTIPVIILS 188

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 189 LIIDYLL 195



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              I +   I +P+G+ +   P ++  I   A +L   P+     L++           +
Sbjct: 24  FFAIALGIAIAVPLGVVLTRFPKVAKIIIAIASMLQTIPSLALLALMIPLFGIG----KV 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G +      K+ A    +   +    + LP   P  + G 
Sbjct: 80  PAIVALFIYSLLPILRNTYIGMNNVNPTLKDCAKGMGMKPIQSIFQVELPLATPIIMAGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +       + ++     G       GLG  I           ++ G + +    L ++
Sbjct: 140 RLSTIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPKLILGGTIPVIILSLIID 192

Query: 571 RFL 573
             L
Sbjct: 193 YLL 195


>gi|320333401|ref|YP_004170112.1| polyamine-transporting ATPase [Deinococcus maricopensis DSM 21211]
 gi|319754690|gb|ADV66447.1| Polyamine-transporting ATPase [Deinococcus maricopensis DSM 21211]
          Length = 496

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 14/181 (7%)

Query: 65  ASRTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A   T R M++  ++      ++  L  K   L     P L  +QS PI+    F  ++ 
Sbjct: 301 ALWVTARTMIAGALLGGALGVLFGYLLGKFVALERFASPYLVALQSTPIVILAPFLTLWL 360

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G V G  ++AI     S ++ M  +    + ++PR   E+  S   +  Q+   L
Sbjct: 361 GF---GTVPGIVVSAI-----SALYPMLVAAMIGVRSVPRPDLELFASLHATRAQRLLRL 412

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P L+  + + +S      V  E +        + G+G  +  A    D      
Sbjct: 413 ELPHALPVLLGALRLGISLALIGAVVWEFV-----DPNVRGLGFLVNQAGAYYDSSRKFA 467

Query: 244 A 244
           A
Sbjct: 468 A 468



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 12/185 (6%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
              L  +W+   TM    +L     +++   G  +G    +     P+   L + P  + 
Sbjct: 296 PTFLSALWVTARTMIAGALLGGALGVLF---GYLLGKFVALERFASPYLVALQSTPIVIL 352

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P +   + +      +   ++      + +L   + G  + P    E+ +S H T  + 
Sbjct: 353 APFLTLWLGFG----TVPGIVVSAISALYPMLVAAMIGVRSVPRPDLELFASLHATRAQR 408

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  +         A   ++V E            GLG  + ++       
Sbjct: 409 LLRLELPHALPVLLGALRLGISLALIGAVVWEFVD-----PNVRGLGFLVNQAGAYYDSS 463

Query: 554 EVVLG 558
                
Sbjct: 464 RKFAA 468


>gi|16130068|ref|NP_416634.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|89108947|ref|AP_002727.1| predicted transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081753|ref|YP_001731073.1| ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901314|ref|YP_002927110.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli BW2952]
 gi|300902220|ref|ZP_07120220.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300955848|ref|ZP_07168189.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301305174|ref|ZP_07211273.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|2507495|sp|P33361|YEHY_ECOLI RecName: Full=Putative osmoprotectant uptake system permease
           protein yehY
 gi|1788451|gb|AAC75191.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|85675244|dbj|BAE76607.1| predicted transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169889588|gb|ACB03295.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|238863241|gb|ACR65239.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|260448774|gb|ACX39196.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|300317315|gb|EFJ67099.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405739|gb|EFJ89277.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300839578|gb|EFK67338.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|315136763|dbj|BAJ43922.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli DH1]
 gi|315255357|gb|EFU35325.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|332343907|gb|AEE57241.1| inner membrane ABC transporter permease YehY [Escherichia coli
           UMNK88]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 122 YFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P     G        A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|315227156|ref|ZP_07868943.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Parascardovia denticolens DSM 10105]
 gi|315119606|gb|EFT82739.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Parascardovia denticolens DSM 10105]
          Length = 278

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYAS 66
           P        P    +L  ++V  I  +     +   + P  I D +       SL  Y  
Sbjct: 25  PGMAIGSWLPCAITVLGLLMVWQIGVMASKASERIISSPSQIWDALVYNWPQLSLSAYV- 83

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    +S  +I+++   +       S+ L   L P+L   Q++PI+      V++F   
Sbjct: 84  -TAFEAISGFLIAIVVGILLGVGLFLSKILYSSLYPLLAGAQTLPIITIAPLFVIWFGYD 142

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             GK        I  +    ++ +     + L  +PR   +V+ +   +     W++ + 
Sbjct: 143 SLGK--------IVLVTVFSLFPIAVQTCRGLEAVPRYFRDVALTCGATPAWSLWHVQLR 194

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +   +   + +S +  +     +E I          GIG ++  A        +  A +
Sbjct: 195 VAGRQIFSGIRISATYIFATAATAEYIGAKA------GIGVWMQAAYNSFQTPMVFAATV 248

Query: 247 TML---GVIFLYDQLLFRPMI 264
            M+   G++     L+ R ++
Sbjct: 249 VMVVLTGLVMALVALVERILL 269



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +     +T F  +   +IA ++ I +G+ +     + S + P        P     
Sbjct: 73  NWPQLSLSAYVTAFEAISGFLIAIVVGILLGVGLFLSKILYSSLYPLLAGAQTLPIITIA 132

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V    Y     +L   +L+   + + I      G  A P  F++VA +   T     
Sbjct: 133 PLFVIWFGY----DSLGKIVLVTVFSLFPIAVQTCRGLEAVPRYFRDVALTCGATPAWSL 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ L        +G   +    +  +  +E            G+G ++  +      P 
Sbjct: 189 WHVQLRVAGRQIFSGIRISATYIFATAATAEYIG------AKAGIGVWMQAAYNSFQTPM 242

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V    ++M      +   +
Sbjct: 243 VFAATVVMVVLTGLVMALV 261


>gi|223938025|ref|ZP_03629923.1| Substrate-binding region of ABC-type glycine betaine transport
           system [bacterium Ellin514]
 gi|223893239|gb|EEF59702.1| Substrate-binding region of ABC-type glycine betaine transport
           system [bacterium Ellin514]
          Length = 495

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 15/193 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +  R  L +  ++  +++        A+K      +++    ++Q++         +   
Sbjct: 294 WTGRHLLLVGISLFFAIIIGIPLGIWASKPGLASQIIIGTSGLVQTV-------PALALL 346

Query: 124 MNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             L P   +G  +  AI A+F   +  +  +    L +IP  L E + +  L    +   
Sbjct: 347 ALLIPIPFLGVSITTAIVALFFYSLLPIVRNTAAGLQSIPTPLRESAAALGLEPGAQLRK 406

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   ++  +  S          + +I  G       G+G  I   +   D   IL
Sbjct: 407 IFLPMASRTILAGVKTSAIINVGSATLAALIGAG-------GLGEPIISGLNLNDHATIL 459

Query: 243 YAMLTMLGVIFLY 255
              +    +    
Sbjct: 460 EGAIPAAILALFV 472



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 14/184 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + +  A II IP+GIW       S  I   + L+   PA     L+   +    L
Sbjct: 299 LLLVGISLFFAIIIGIPLGIWASKPGLASQIIIGTSGLVQTVPALA---LLALLIPIPFL 355

Query: 447 NPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             ++  +++ + F +   I+ N  AG  + P   +E A++  +      R I LP     
Sbjct: 356 GVSITTAIVALFFYSLLPIVRNTAAGLQSIPTPLRESAAALGLEPGAQLRKIFLPMASRT 415

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IM 562
            + G  T+      ++ ++ +   G       GLG  I           ++ G +   I+
Sbjct: 416 ILAGVKTSAIINVGSATLAALIGAG-------GLGEPIISGLNLNDHATILEGAIPAAIL 468

Query: 563 CCFV 566
             FV
Sbjct: 469 ALFV 472


>gi|303240354|ref|ZP_07326872.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
 gi|302592081|gb|EFL61811.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
          Length = 253

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 101/251 (40%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            + F+++  I+    + I+E  +P     +   T     L  ++  T    +   ++ ++
Sbjct: 17  FIVFIVIWEIVTK-ANNIKEYILPSPSAILNEFTKSGDLLLYHSLTTITETVLGFILGII 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + + + +  +    +  P + + Q++PI+       ++F      K+I   L   F 
Sbjct: 76  LAVLLSVIMSSLKIFRNIFYPFMVLSQTVPIIAIAPIITIWFGIGIVSKLIICVLVVFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T ++ + L +  +DLE++ +    S  Q F  L +P ++      + ++ +
Sbjct: 135 -------PVTLNLTEGLNSYDKDLEDLLKCMNASKLQIFTKLKLPSALVYFFSGLKIAAA 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQL 258
                 V SE            G+G ++  ++K  +  A+   ++       ++F++  +
Sbjct: 188 YAVMGAVMSE------WTGAESGLGIFLTRSMKSFNTAAMFADIVLISAFSILLFIFISI 241

Query: 259 LFRPMIVWSNK 269
           L +  I W+ K
Sbjct: 242 LEKKTIKWNLK 252



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 78/195 (40%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++    T+   V+  I+  I+ + + + +       +   PF  L    P     P++ 
Sbjct: 55  LLYHSLTTITETVLGFILGIILAVLLSVIMSSLKIFRNIFYPFMVLSQTVPIIAIAPIIT 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  ++  +   L++ F     +  N+  G +++  D +++    + +  + +  + 
Sbjct: 115 IWFGIGIVSKLIICVLVVFF----PVTLNLTEGLNSYDKDLEDLLKCMNASKLQIFTKLK 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    Y+ +G   A   A   +++SE           +GLG ++  S +  +   +   
Sbjct: 171 LPSALVYFFSGLKIAAAYAVMGAVMSEW------TGAESGLGIFLTRSMKSFNTAAMFAD 224

Query: 559 VLIMCCFVLALNRFL 573
           ++++  F + L  F+
Sbjct: 225 IVLISAFSILLFIFI 239


>gi|268326246|emb|CBH39834.1| putative ABC-type sulfonate/taurin nitrate/bicarbonate transporter,
           permease component [uncultured archaeon]
          Length = 249

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 15/241 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + WF +       +    I  +   F+        +   +T +RV +  ++ S +    G
Sbjct: 17  VIWFVISGYYNSPLFPGPIETVYAFFSILATQDGWYQIGVTCYRVFIGTLLGSCVGALCG 76

Query: 406 IWIGFRPHISSKIQPFAQ-LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           I   +       ++     L  + P+  +  + V       + P L ++  +I     + 
Sbjct: 77  ILPRYSKMAEYTVRSVVYPLFESIPSLCWVLIFVVWFGLSDMTPILAITAAVIP----FF 132

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + N+  G         E+A +      R  R +I+P ++PY  +   T+   AW   I+ 
Sbjct: 133 IINIWEGVKELDESLIEMAHTCTRNRLRILRKVIMPMLYPYAFSAFKTSFEVAWKVVILG 192

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           EV           G+G  +  S E  +   V    L     ++  +      L+ Y  R 
Sbjct: 193 EVFG------AACGIGYMLWISYEVYAIEYVFAWTLCCAMIIIVFDYG----LFNYIDRR 242

Query: 585 L 585
            
Sbjct: 243 Y 243



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 93/251 (37%), Gaps = 16/251 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +IF ++F + AF+++  +I+   +       P + V      L           T  R+ 
Sbjct: 4   KIFYSVFAISAFLVIWFVISG-YYNSPLFPGPIETVYAFFSILATQDGWYQIGVTCYRVF 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILD-IMQSIPILGFLTFTVVYFMNLYPGKVI 132
              ++      +   L   S+     +  ++  + +SIP L ++   VV+F         
Sbjct: 63  IGTLLGSCVGALCGILPRYSKMAEYTVRSVVYPLFESIPSLCWVLIFVVWFGL------- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +++  I AI  + +     ++++ +  +   L E++ +   +  +    + +P   P  
Sbjct: 116 -SDMTPILAITAAVIPFFIINIWEGVKELDESLIEMAHTCTRNRLRILRKVIMPMLYPYA 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 S    W  V+  E+           GIG  + ++ +   +  +    L    +I
Sbjct: 175 FSAFKTSFEVAWKVVILGEVFGAAC------GIGYMLWISYEVYAIEYVFAWTLCCAMII 228

Query: 253 FLYDQLLFRPM 263
            ++D  LF  +
Sbjct: 229 IVFDYGLFNYI 239


>gi|209919589|ref|YP_002293673.1| putative glycine/betaine/choline ABC transporter permease
           [Escherichia coli SE11]
 gi|209912848|dbj|BAG77922.1| putative glycine/betaine/choline ABC transporter permease component
           [Escherichia coli SE11]
 gi|324015916|gb|EGB85135.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFQHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + +++
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFQH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|145632604|ref|ZP_01788338.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 3655]
 gi|145634647|ref|ZP_01790356.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittAA]
 gi|145636376|ref|ZP_01792045.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittHH]
 gi|144986799|gb|EDJ93351.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae 3655]
 gi|145268192|gb|EDK08187.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittAA]
 gi|145270541|gb|EDK10475.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Haemophilus influenzae PittHH]
          Length = 245

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 15/242 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  +   +++  ++  L         P        +      L Q+   T L + 
Sbjct: 4   RLLKPLLIVGVLLMIWQMVATLG-SFPHYIFPSPQAVGQQLFTHAELLWQHTQVTLLEIC 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  LF  + A L +  R++  VL+PIL I Q+IP+       V++F      K++ 
Sbjct: 63  LGLLLGFLFGLISALLLSFFRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVM 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L   F +  +         Y  L N P+   +++++F +S  +    + +P ++P   
Sbjct: 123 SVLIIYFPVTAAC--------YDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFA 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++S      VA    VVG+ V    G+G  +  A     +  +  A+L ++ +  
Sbjct: 175 SGLRIAVS------VAPIGAVVGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVSISL 228

Query: 254 LY 255
             
Sbjct: 229 CL 230



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 18/177 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + + F   IS+ + P   +  A P     PL+V    Y   +  +   L++ F     + 
Sbjct: 77  LLLSFFRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYF----PVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
                G    P  + ++A +F+I+  R    + LP   P + +G   A   A   ++V E
Sbjct: 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLW 574
                     + GLG  +  +  +     +   +LI+    L         L+RF+W
Sbjct: 193 WVG------SSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHRFIW 243


>gi|331653557|ref|ZP_08354558.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M718]
 gi|331048406|gb|EGI20482.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M718]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|288917644|ref|ZP_06412008.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288351037|gb|EFC85250.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 237

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 76/243 (31%), Gaps = 14/243 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R+  P    +LA +    +   +    +      D V    I     +L      T   +
Sbjct: 9   RQYGPAGVIVLAVLGAWKLATSVFGVEEYILPAPDEVITTLIDRWDRTLSSATWVTLKEV 68

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +    I++    + A     S      + P+L   Q+IP++       + F      K+I
Sbjct: 69  VVGFAIAVAAGLLIACALHFSAIARRAIYPLLIGSQTIPVVVIAPILAIIFGYSITPKLI 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F         +       L  +   L  + R+   + W  F  +  P ++P +
Sbjct: 129 LVALLCFF--------PIVVGTLDGLAAVDPQLTRMMRTLYGNRWSIFLRVEFPSALPSM 180

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      V       G+      G+G  +  A+ +     +  A+  +  + 
Sbjct: 181 FTGLRLSAAYAATAAV------FGEYSGSTDGLGHVMRQAVPQLQSSLVFAAITLLTAMS 234

Query: 253 FLY 255
              
Sbjct: 235 VAL 237



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  VVV   IA    + +   + F       I P        P  V  P++     Y 
Sbjct: 63  VTLKEVVVGFAIAVAAGLLIACALHFSAIARRAIYPLLIGSQTIPVVVIAPILAIIFGYS 122

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + ++LL      + I+   + G +A       +  + +   W  +  +  P   P
Sbjct: 123 ITPKLILVALL----CFFPIVVGTLDGLAAVDPQLTRMMRTLYGNRWSIFLRVEFPSALP 178

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              TG   +   A  A++  E          T GLG  + ++  +     V   + ++  
Sbjct: 179 SMFTGLRLSAAYAATAAVFGEY------SGSTDGLGHVMRQAVPQLQSSLVFAAITLLTA 232

Query: 565 FVLAL 569
             +AL
Sbjct: 233 MSVAL 237


>gi|222871734|gb|EEF08865.1| predicted protein [Populus trichocarpa]
          Length = 170

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 10/166 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +G      +   P      A P   F P++V               L     + + I+ N
Sbjct: 1   MGSSKLAYAATYPLMTAFNALPKAAFVPILVVWFGLGAG----PAILTAFLISFFPIMVN 56

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +  G +    + ++V              + LP   P++      A   A+  + VSE+ 
Sbjct: 57  IATGLATLEPELEDVLRVLGAKRRDVLLKVGLPRAMPFFFASLKVAITLAFVGTTVSEM- 115

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +    G+G  +  +      P    G++++    + +    
Sbjct: 116 -----NAANEGIGYLLVSAGSAMKMPLAFAGLVVIAIMAMGMYELF 156



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 17/183 (9%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S+       P++    ++P   F+   VV+F              AI   F    + 
Sbjct: 1   MGSSKLAYAATYPLMTAFNALPKAAFVPILVVWFGLGAGP--------AILTAFLISFFP 52

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  ++   L  +  +LE+V R            +G+P +MP    ++ ++++  +     
Sbjct: 53  IMVNIATGLATLEPELEDVLRVLGAKRRDVLLKVGLPRAMPFFFASLKVAITLAFVGTTV 112

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           SEM    +      GIG  +  A     +      ++ +  +     +L   L + M  W
Sbjct: 113 SEMNAANE------GIGYLLVSAGSAMKMPLAFAGLVVIAIMAMGMYELFSVLEKRMTGW 166

Query: 267 SNK 269
           +++
Sbjct: 167 AHR 169


>gi|193062469|ref|ZP_03043564.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|194427116|ref|ZP_03059667.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|218695742|ref|YP_002403409.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli 55989]
 gi|260844737|ref|YP_003222515.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|300924495|ref|ZP_07140464.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301325240|ref|ZP_07218758.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|192932135|gb|EDV84734.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|194414737|gb|EDX31008.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|218352474|emb|CAU98251.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli 55989]
 gi|257759884|dbj|BAI31381.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|300419304|gb|EFK02615.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300847900|gb|EFK75660.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|320199724|gb|EFW74313.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli EC4100B]
 gi|323184246|gb|EFZ69623.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1357]
 gi|324118029|gb|EGC11928.1| inner membrane transport system [Escherichia coli E1167]
          Length = 385

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|328957280|ref|YP_004374666.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCD [Carnobacterium sp. 17-4]
 gi|328673604|gb|AEB29650.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCD [Carnobacterium sp. 17-4]
          Length = 232

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 74/200 (37%), Gaps = 15/200 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +     R  L  +  ++ + +         ++  +L   ++   +++Q+IP L  L+  +
Sbjct: 22  IWSQFFRHFLISIYGVLFAAIVGIPLGFWISRHGKLADWVIGAANVIQTIPSLAMLSILM 81

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +                 +  +F   +  +  + Y  + ++ +++ +  +   ++ WQ  
Sbjct: 82  LGLGLGV--------NTVVSTVFLYSLLPIIKNTYAGVQSVDKNILDSGKGMGMTRWQLT 133

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++  ++  +  +M       V    +    T I   G+G  I   +   D  A
Sbjct: 134 YMIELPLALSIIMAGIRNAM-------VVGIGVTAIGTFIGAGGLGDIITRGVNVTDGGA 186

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           I+ A       + +   LL 
Sbjct: 187 IILAGAIPTAFMAIISDLLL 206



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ + Y  +               I+++     ++ A+I+ IP+G WI     ++  + 
Sbjct: 7   LWEQLLYYFSENGLYIWSQFFRHFLISIY----GVLFAAIVGIPLGFWISRHGKLADWVI 62

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          +   +   +   I+ N  AG  +   + 
Sbjct: 63  GAANVIQTIPSLAMLSILMLGLGLGVNT----VVSTVFLYSLLPIIKNTYAGVQSVDKNI 118

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +      +T W+    I LP      + G   A       + +      G       GL
Sbjct: 119 LDSGKGMGMTRWQLTYMIELPLALSIIMAGIRNAMVVGIGVTAIGTFIGAG-------GL 171

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I           ++L   I   F+  ++  L
Sbjct: 172 GDIITRGVNVTDGGAIILAGAIPTAFMAIISDLL 205


>gi|266619222|ref|ZP_06112157.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
 gi|288869256|gb|EFD01555.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
          Length = 214

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A++IS         L ++ R+    ++ I+++  +IP +  L F + +           
Sbjct: 29  TAILISGTIGLFLGILISEHRKFATWIIGIINVAYTIPSISMLGFLIPFTGIG------- 81

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A  A+    +  M  + Y  +  I     EV++    + WQ  + + +P ++P +V
Sbjct: 82  -NKTATIALTIYGLLPMVRNTYTGITTIEASTIEVAKGMGSTPWQILYKVKLPLALPVIV 140

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +          VV +  +    + I   G+G  I   I   +        + +  V  
Sbjct: 141 AGLR-------SMVVMTISLSGIASYIGAGGLGVAIYRGITTNNAAMTYAGSILIAIVAL 193

Query: 254 LYDQLL 259
             DQL+
Sbjct: 194 ASDQLV 199



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             I+I+  I + +GI I      ++ I     +    P+      ++      +    + 
Sbjct: 29  TAILISGTIGLFLGILISEHRKFATWIIGIINVAYTIPSISMLGFLIPFTGIGNKTATIA 88

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L++  +      ++ N   G +       EVA     T W+    + LP   P  V G  
Sbjct: 89  LTIYGLL----PMVRNTYTGITTIEASTIEVAKGMGSTPWQILYKVKLPLALPVIVAGLR 144

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +         +++   S    ++   GLG  I       +      G +++    LA ++
Sbjct: 145 S-------MVVMTISLSGIASYIGAGGLGVAIYRGITTNNAAMTYAGSILIAIVALASDQ 197

Query: 572 FL 573
            +
Sbjct: 198 LV 199


>gi|317048041|ref|YP_004115689.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949658|gb|ADU69133.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 248

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 14/229 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
           ++ L  I    +P  ++    I  +   L     RT L  L    +   F      L   
Sbjct: 24  SVTLFSISPRYLPSLLMVAQDIRANADQLLVSTGRTALETLLGFALGSAFGVACGILFFY 83

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
              +     P+  + Q++P++ F    V++F N           A +   F      +T 
Sbjct: 84  VSWIDRAWFPLFVVSQTVPVIAFGALVVIWFGNTL--------FAKVMIAFYLTFLPVTL 135

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  + L  +      + RSF  SG ++F  L  P + P +   + + +S      +  E 
Sbjct: 136 NTKRGLQMVDPLHISLLRSFGASGLKRFLVLHFPAAAPAIFVALKLGISLSLVGAIVGEW 195

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                      G+G  +  ++  +D++ +   ++       L   ++ R
Sbjct: 196 FG------DTVGLGVLLIQSMYNEDVVRMWTLIVICGLTGALLYGVVER 238



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 63/223 (28%), Gaps = 10/223 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           FW   V   +I   +     +V      +   ++     T    ++   + S   +  GI
Sbjct: 20  FWQGSVTLFSISPRYLPSLLMVAQDIRANADQLLVSTGRTALETLLGFALGSAFGVACGI 79

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
              +   I     P   +    P   F  LVV        N      ++  + T   +  
Sbjct: 80  LFFYVSWIDRAWFPLFVVSQTVPVIAFGALVVIWFG----NTLFAKVMIAFYLTFLPVTL 135

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G          +  SF  +G + +  +  P   P            +   +IV E 
Sbjct: 136 NTKRGLQMVDPLHISLLRSFGASGLKRFLVLHFPAAAPAIFVALKLGISLSLVGAIVGEW 195

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                    T GLG  + +S        +   ++I       L
Sbjct: 196 FG------DTVGLGVLLIQSMYNEDVVRMWTLIVICGLTGALL 232


>gi|209545382|ref|YP_002277611.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533059|gb|ACI52996.1| binding-protein-dependent transport systems inner membrane
           component [Gluconacetobacter diazotrophicus PAl 5]
          Length = 253

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 87/247 (35%), Gaps = 14/247 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               L  ++++    + L G+    +P        +      L   A  T L  +  + +
Sbjct: 10  PLGTLCGLVLLWWGVVRLGGVPPYLLPPPAEVARALWTQRGLLVAAAGTTLLETVLGLAL 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                 V A L   S  +   ++P++ + Q++P+       V++F      KV+ A L  
Sbjct: 70  GTAGGAVLAVLMTASGPVRRWMMPLVLLSQAVPVFALAPLLVLWFGFGIASKVVMAVLVI 129

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F         +T S +  L   P    +++R+     W+   ++ +  ++P     + +
Sbjct: 130 FF--------PVTSSFFDGLRRTPPGWLDLARTMGAHPWRILLHVRLSAALPAFASGLRV 181

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           + +      V  E +          G+G  +  A    +   +  A+L +  +  L    
Sbjct: 182 ATAIAPLGAVVGEWVGASS------GLGFLMQTANTRFETDLMFAALLVLATMTILLWWG 235

Query: 259 LFRPMIV 265
           + R +  
Sbjct: 236 VDRALAR 242



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 77/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W+ VV    +          V    +     ++     T+   V+ + + +    
Sbjct: 16  GLVLLWWGVVRLGGVPPYLLPPPAEVARALWTQRGLLVAAAGTTLLETVLGLALGTAGGA 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +     +   + P   L  A P     PL+V    +   +  +   L++ F    
Sbjct: 76  VLAVLMTASGPVRRWMMPLVLLSQAVPVFALAPLLVLWFGFGIASKVVMAVLVIFF---- 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  +   G    P  + ++A +     WR   ++ L    P + +G   A   A   ++
Sbjct: 132 PVTSSFFDGLRRTPPGWLDLARTMGAHPWRILLHVRLSAALPAFASGLRVATAIAPLGAV 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           V E          ++GLG  +  +  +     +   +L++    + L
Sbjct: 192 VGEWVG------ASSGLGFLMQTANTRFETDLMFAALLVLATMTILL 232


>gi|239825865|ref|YP_002948489.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. WCH70]
 gi|239806158|gb|ACS23223.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. WCH70]
          Length = 211

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +AM+I++L       +  + ++L   ++ I  I+Q+IP L  L F +  F          
Sbjct: 27  TAMIIAILVAVPLGIVLTRHKKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIG------- 79

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S+P ++
Sbjct: 80  -KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIM 138

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  +        V +  +    T I   G+G  I   ++  D   IL   +    +  
Sbjct: 139 AGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILAGAIPAAVLAI 191

Query: 254 LYDQLL 259
           L+D LL
Sbjct: 192 LFDLLL 197



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             +IIA ++ +P+GI +     ++  I   A ++   P+      ++       L   + 
Sbjct: 27  TAMIIAILVAVPLGIVLTRHKKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIGKLPAIIA 86

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L+L  +      IL N   G         +      +T  +    + LP   P  + G  
Sbjct: 87  LTLYALL----PILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIMAGVR 142

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA       + ++     G       GLG  I           ++ G +      +  + 
Sbjct: 143 TATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILAGAIPAAVLAILFDL 195

Query: 572 FLWH 575
            L  
Sbjct: 196 LLRK 199


>gi|325576579|ref|ZP_08147297.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325161142|gb|EGC73257.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 245

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 14/195 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q+   T + +   +++  LF    A L + S +   +L+PIL I Q+IP+       V
Sbjct: 50  LWQHTLITLIEIGLGLLLGFLFGLSSALLLSFSPKTSSLLLPILVISQAIPVFAIAPILV 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++     P K++ A L   F +  +         Y  L N P+   +++++F+ S W+  
Sbjct: 110 LWLGYGMPSKIVMAILIIYFPVTAAC--------YDGLRNTPQAWIDLAKTFKPSPWRLL 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P       +++S      VA    V+G+ V    G+G  +  A     +  
Sbjct: 162 LKVRLPAALPAFASGFRIAVS------VAPIGAVIGEWVGSSEGLGYLMIHANARMQVDL 215

Query: 241 ILYAMLTMLGVIFLY 255
           +  A+L ++ +    
Sbjct: 216 MFAALLILVAISLCL 230



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 18/172 (10%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  SS + P   +  A P     P++V  + Y   +  +   L++ F     +      G
Sbjct: 83  PKTSSLLLPILVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYF----PVTAACYDG 138

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P  + ++A +F  + WR    + LP   P + +G   A   A   +++ E      
Sbjct: 139 LRNTPQAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVSVAPIGAVIGEWVG--- 195

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLWH 575
               + GLG  +  +  +     +   +LI+    L         L RF+WH
Sbjct: 196 ---SSEGLGYLMIHANARMQVDLMFAALLILVAISLCLYFSIDWLLRRFIWH 244


>gi|257885763|ref|ZP_05665416.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|289565257|ref|ZP_06445708.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCD [Enterococcus faecium D344SRF]
 gi|294615105|ref|ZP_06694991.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1636]
 gi|257821619|gb|EEV48749.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|289162913|gb|EFD10762.1| osmotically activated L-carnitine/choline ABC transporter, permease
           OpuCD [Enterococcus faecium D344SRF]
 gi|291592047|gb|EFF23670.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1636]
          Length = 220

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 188

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 189 AGALPTALMAIITDWLLGILERRL 212


>gi|261405546|ref|YP_003241787.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261282009|gb|ACX63980.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 293

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 85/252 (33%), Gaps = 12/252 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--L 377
           L         +   +     V+ ++ + W        +   + S    +   T+  +   
Sbjct: 34  LDEEGLERRRSRRIVWGRSAVAVLVFLVWEVFTRIGLLDSYYWSSPSAILRTTWTQITEG 93

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T    ++  +  + +   +G+   +    +   +P+  +L A P     P++
Sbjct: 94  TLLRDITYTSGSTILGFVFGTFLGALLGLSFWWSKSYAGISEPYLIILNALPKLALAPVL 153

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +     +       + +  +      +  +G  +   D +++  S      + +  +
Sbjct: 154 VILLGIGFFSKVALAFSMTVVVSA----LSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKV 209

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P+ ++        A   +IV E  +       + G+G  I  +        V +
Sbjct: 210 VVPWSMPWIISSLRINIALALAGAIVGEFIA------SSQGVGRMIMYAGTILDINLVWV 263

Query: 558 GVLIMCCFVLAL 569
           GV+++    + +
Sbjct: 264 GVVVLSMLSMVM 275



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 89/252 (35%), Gaps = 19/252 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLPQ 63
               RR    ++   A  +++ ++  +   I        + P  I+      +   +L +
Sbjct: 38  GLERRRSRRIVWGRSAVAVLVFLVWEVFTRIGLLDSYYWSSPSAILRTTWTQITEGTLLR 97

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + T+   +   V       +       S+    +  P L I+ ++P L      V+  
Sbjct: 98  DITYTSGSTILGFVFGTFLGALLGLSFWWSKSYAGISEPYLIILNALPKLALAPVLVILL 157

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +         + +   F+  V     S Y  + ++  D+E++  S      Q F  +
Sbjct: 158 GIGF--------FSKVALAFSMTVVVSALSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKV 209

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP+SMP ++ ++ ++++      +  E I          G+G  I  A    D+  +  
Sbjct: 210 VVPWSMPWIISSLRINIALALAGAIVGEFIASSQ------GVGRMIMYAGTILDINLVWV 263

Query: 244 AMLTMLGVIFLY 255
            ++ +  +  + 
Sbjct: 264 GVVVLSMLSMVM 275


>gi|332528632|ref|ZP_08404614.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
 gi|332041948|gb|EGI78292.1| binding-protein-dependent transport systems inner membrane
           component [Hylemonella gracilis ATCC 19624]
          Length = 279

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 91/277 (32%), Gaps = 16/277 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV-CGVAIGIAWQSIGYIVN 369
            +     + +G       +             +L I W  VV  G+   I        V+
Sbjct: 11  RSASPWAQAVGGAPAVPRKRNWAKALPFIGPALLFIVWDLVVRLGMVKPILLPPPAATVS 70

Query: 370 HFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                     +     +T++R     +IA+++ +P+G+ +G        ++       + 
Sbjct: 71  TLLNGLAGGPLLTDFVVTLWRTAQAFLIAAVVGVPLGVVLGSAEKAYRSVEFLIDFFRST 130

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P++   PL +       +N     +    FG    ++FN   G           A     
Sbjct: 131 PSSALIPLFLMIFGVSDINKVAIAA----FGALLIVVFNSAYGVINARKQRVMAAKVMGA 186

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + W+ ++ +++         G  +A   A    IV+E+          +GLG  I  + +
Sbjct: 187 SRWQIFKDVLIWESLQPSFVGLRSAVSMALVIVIVAEMFIGSD-----SGLGNRIINAQQ 241

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
             +  ++   +L        LN      L+L   R +
Sbjct: 242 VMNVKDMYAAILSAGILGYVLNI-----LFLVAERRI 273



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 95/259 (36%), Gaps = 16/259 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +  P I   L F++   ++ + +        P   V  +   L    L      T  R  
Sbjct: 34  KALPFIGPALLFIVWDLVVRLGMVKPILLPPPAATVSTLLNGLAGGPLLTDFVVTLWRTA 93

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A +I+ +       +   + +    +  ++D  +S P    +   ++ F      KV  
Sbjct: 94  QAFLIAAVVGVPLGVVLGSAEKAYRSVEFLIDFFRSTPSSALIPLFLMIFGVSDINKVAI 153

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A   A+  +         F+    + N  +     ++    S WQ F  + +  S+    
Sbjct: 154 AAFGALLIV--------VFNSAYGVINARKQRVMAAKVMGASRWQIFKDVLIWESLQPSF 205

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++S     V+ +EM +  D+     G+G+ I  A +  ++  +  A+L+   + +
Sbjct: 206 VGLRSAVSMALVIVIVAEMFIGSDS-----GLGNRIINAQQVMNVKDMYAAILSAGILGY 260

Query: 254 LYDQLLF---RPMIVWSNK 269
           + + L     R ++ WS +
Sbjct: 261 VLNILFLVAERRIVHWSGR 279


>gi|283853439|ref|ZP_06370683.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
 gi|283571159|gb|EFC19175.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
          Length = 263

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            ++      T+ R ++ + +A+++ IP G+ +G    +S  + P  +LL   P     P 
Sbjct: 57  GFLPLEAGQTLGRALLGLGLAALLAIPCGLAMGVSRRLSGLLTPTVELLRPVPPPAIIPA 116

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +                +++F   + IL   + GA      F+  A+++  T W     
Sbjct: 117 AMLFWGIGLG----MKLFVVVFACFFPILVGAVDGARGVAPGFRLTAAAYGATRWDMLAR 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P    G  TA   A   +++SE+         T G+G YI       + PE+ 
Sbjct: 173 VILPAAGPSVAAGFRTAVPMALIVAVLSEMIG------ATGGIGHYILRMERTFAIPEMY 226

Query: 557 LGVLIMCCFVLALN 570
            GV+++    LA+N
Sbjct: 227 AGVVMLGIMGLAVN 240



 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 90/262 (34%), Gaps = 18/262 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRM 72
           R    ++ LLA   +    +      +    P  I+      L     LP  A +T  R 
Sbjct: 11  RRLSGLWVLLALTGLWEAASRAGLVSKLYFPPISIIAATFWKLTATGFLPLEAGQTLGRA 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  + ++ L           SRRL  +L P +++++ +P    +   ++++      K+ 
Sbjct: 71  LLGLGLAALLAIPCGLAMGVSRRLSGLLTPTVELLRPVPPPAIIPAAMLFWGIGLGMKL- 129

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                  F +  +  + +          +       + ++  + W     + +P + P +
Sbjct: 130 -------FVVVFACFFPILVGAVDGARGVAPGFRLTAAAYGATRWDMLARVILPAAGPSV 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 ++       V SEMI          GIG YI    +   +  +   ++ +  + 
Sbjct: 183 AAGFRTAVPMALIVAVLSEMIG------ATGGIGHYILRMERTFAIPEMYAGVVMLGIMG 236

Query: 253 FLYDQLLFR---PMIVWSNKFR 271
              +  + R    ++ W + ++
Sbjct: 237 LAVNAAVERCLGRLLRWHDGWK 258


>gi|138895681|ref|YP_001126134.1| putative transport system permease [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249542|ref|ZP_03148239.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
 gi|134267194|gb|ABO67389.1| Putative transport system permease protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|196210836|gb|EDY05598.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
          Length = 251

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +   +       +  RT+L +L  + +      +   L  +   L  +  
Sbjct: 31  LPAPSVVAATLFEGIKSGYFWPHIVRTSLEVLLGLSLGSGLGLIVGILMGEIECLRKLFF 90

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P L      +++F      KVI   L   F         +  +   ++   
Sbjct: 91  PYVVASQAVPKLALAPLFILWFGFGMTSKVIITALICFF--------PLLENTVTAIQYT 142

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R+  E+ R    + WQ   +L +P  +P +     +++       V  E I   +    
Sbjct: 143 DRNKLELFRVLGATRWQTLIHLKLPAGLPNIFAGFRVAVVLAVVGAVVGEFIGASE---- 198

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G+ I  +    D   +   +L +  +  +  Q++
Sbjct: 199 --GLGAMIIASQGMMDTPLMFSVLLLLTLLGMVLYQIV 234



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VGI +G    +     P+     A P     PL +    +   +      ++      + 
Sbjct: 75  VGILMGEIECLRKLFFPYVVASQAVPKLALAPLFILWFGFGMTSK----VIITALICFFP 130

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +L N +        +  E+      T W+   ++ LP   P    G   A   A   ++V
Sbjct: 131 LLENTVTAIQYTDRNKLELFRVLGATRWQTLIHLKLPAGLPNIFAGFRVAVVLAVVGAVV 190

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            E          + GLGA I  S      P +   +L++    + L + +
Sbjct: 191 GEFIG------ASEGLGAMIIASQGMMDTPLMFSVLLLLTLLGMVLYQIV 234


>gi|108805820|ref|YP_645757.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108767063|gb|ABG05945.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 266

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 84/247 (34%), Gaps = 17/247 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              V  +  +  +L  I    +P  +        +   +      T L  +   ++    
Sbjct: 30  AGLVFGMWQLATILFDIPTYILPTPVEVTFTAFEERQRILDAIGVTGLEAVGGFIVGNFT 89

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+ ATL A S      L+PI   +QSIPI+    F  + F   +   +I A +   F  
Sbjct: 90  GFLAATLIAYSTTAARTLLPIGLAIQSIPIVALTPFLTLLFGRGFATVMIIAAIIVFF-- 147

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                     +      ++  +  E+      S WQ FW+L  P ++P L     +  + 
Sbjct: 148 ------PTLVNGVLGFRSVRAEALEMLGIMSASDWQVFWHLRFPTALPNLFAAFRIGAAT 201

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLL 259
                + +E +  G       G+G  I  A    ++  +  A+L    +         L+
Sbjct: 202 SILGAMIAEWVTTGS------GLGYLILQAGVNFEVELMWAAILISSMLALTALALISLV 255

Query: 260 FRPMIVW 266
              +  W
Sbjct: 256 ENLLCPW 262



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 78/253 (30%), Gaps = 23/253 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-------------QD 375
               Q+   +R S     + + V+    +   WQ    + +  TY             ++
Sbjct: 5   ARHQQVRPQKRRSSSFKTWLYAVLSAGLVFGMWQLATILFDIPTYILPTPVEVTFTAFEE 64

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    +T    V   I+ +         I +    +  + P    + + P     P
Sbjct: 65  RQRILDAIGVTGLEAVGGFIVGNFTGFLAATLIAYSTTAARTLLPIGLAIQSIPIVALTP 124

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            +            +  ++++ F      L N + G  +   +  E+      + W+ + 
Sbjct: 125 FLTLLFGRGFATVMIIAAIIVFF----PTLVNGVLGFRSVRAEALEMLGIMSASDWQVFW 180

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++  P   P            +   ++++E  + G      +GLG  I ++        +
Sbjct: 181 HLRFPTALPNLFAAFRIGAATSILGAMIAEWVTTG------SGLGYLILQAGVNFEVELM 234

Query: 556 VLGVLIMCCFVLA 568
              +LI     L 
Sbjct: 235 WAAILISSMLALT 247


>gi|241206618|ref|YP_002977714.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860508|gb|ACS58175.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 278

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I + F P +   + P        P     PLVV    +  L       LL+   T + +L
Sbjct: 103 ILMDFVPFMRRALLPVFIASQTLPLVAIAPLVVLWFGFGLL----PKILLVALVTFFPLL 158

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             ++ G  +   D  E+  S   + WR +R   LP   PY+  G   +   A   +I +E
Sbjct: 159 VALLQGYESTDRDIAELLYSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAE 218

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A          GLG YI  +        V+  V++     L L
Sbjct: 219 YAG------AARGLGIYILNAKNNFRPDLVLAAVIVSAVLTLCL 256



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 14/220 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L GI+ + +P     ++   L+   L      T    L    +SL F F  + L      
Sbjct: 51  LSGIKPSILPAPSRIVMQGWLNREGLIANTWPTLGATLGGFALSLAFAFAASILMDFVPF 110

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L+P+    Q++P++      V++F            L  I  +     + +  ++ 
Sbjct: 111 MRRALLPVFIASQTLPLVAIAPLVVLWFGFGL--------LPKILLVALVTFFPLLVALL 162

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q   +  RD+ E+  S + S W+ F    +P S+P     + +S++      + +E    
Sbjct: 163 QGYESTDRDIAELLYSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAEYAG- 221

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                   G+G YI  A        +L A++    +    
Sbjct: 222 -----AARGLGIYILNAKNNFRPDLVLAAVIVSAVLTLCL 256


>gi|154505829|ref|ZP_02042567.1| hypothetical protein RUMGNA_03369 [Ruminococcus gnavus ATCC 29149]
 gi|153793847|gb|EDN76267.1| hypothetical protein RUMGNA_03369 [Ruminococcus gnavus ATCC 29149]
          Length = 265

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 76/196 (38%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     IT++  ++  +  + I I + + + +   +S  + P+  +L + P +   PL+
Sbjct: 69  SIFLHLGITLYETILSFLFVTGISILIAVILWYSKKLSEILDPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+    +    +  ++  + H T       +
Sbjct: 129 IVWLGANQTTIIIAGMSVAIFGS----ILNLYTSFTTIDEEKIKLIYTLHGTRHHALTKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  ++      G      I+ E  +         GLG  I  S++      +++
Sbjct: 185 VLPSSIPAIISNMKVNIGLCLVGVIIGEFLA------ARNGLGYLIIYSSQVFKMDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L   +
Sbjct: 239 SIVLLCIMAMGLYALI 254



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + +     + + A +   S++L  +L P L ++ S+P        +V+ 
Sbjct: 73  HLGITLYETILSFLFVTGISILIAVILWYSKKLSEILDPYLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  +I     AIF            ++Y S   I  +  ++  +   +       +
Sbjct: 133 GANQTTIIIAGMSVAIFGSI--------LNLYTSFTTIDEEKIKLIYTLHGTRHHALTKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +   +      G+G  I  + +   +  +L 
Sbjct: 185 VLPSSIPAIISNMKVNIGLCLVGVIIGEFLAARN------GLGYLIIYSSQVFKMDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +      L+
Sbjct: 239 SIVLLCIMAMGLYALI 254


>gi|189500178|ref|YP_001959648.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           phaeobacteroides BS1]
 gi|189495619|gb|ACE04167.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           phaeobacteroides BS1]
          Length = 448

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 83/228 (36%), Gaps = 10/228 (4%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD---IVDIVPITLDV---HSL 61
           P  + ++ F    D  A   +  +   +   +++  +P        +   +LD      +
Sbjct: 160 PEEMGKQYFVPRVDEFAGTSLAALFPYIEENLEKMLLPEQTFYWGFLTERSLDAHIFGGV 219

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATL---AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
                 T    + AM+ +     + A      A+      +L      +  +P + F  F
Sbjct: 220 WAEIQGTLFLAIGAMLFAFPMGVIAAIYFTEYARENVFTSILRSANSTLAGVPSIVFGLF 279

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +F+N        + LA    +    +  +  +  +++ ++P+  +E S     + W+
Sbjct: 280 GLAFFINTIKVSDSKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASIGLGSTKWR 339

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
               + +P ++PG++   ++S+        A  +     +V    G+G
Sbjct: 340 TIVTVILPAALPGIITGGIISLGRA-AGETAPIIFTAAVSVGATIGLG 386



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPA 430
           ++       +   + L I A +   P+G+         ++   F  +L +        P+
Sbjct: 214 HIFGGVWAEIQGTLFLAIGAMLFAFPMGVIAAIYFTEYARENVFTSILRSANSTLAGVPS 273

Query: 431 NVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            VF        ++ +        L  SL +       I+        + P  +KE +   
Sbjct: 274 IVFGLFGLAFFINTIKVSDSKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASIGL 333

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVASWGHIHLRTTGLGAYI 543
             T WR    +ILP   P  +TG I + G A       I +   S G     T GLG  +
Sbjct: 334 GSTKWRTIVTVILPAALPGIITGGIISLGRAAGETAPIIFTAAVSVG----ATIGLGDVL 389

Query: 544 AESTEKGSF 552
              T   S+
Sbjct: 390 TSPTPALSW 398


>gi|320353984|ref|YP_004195323.1| binding-protein-dependent transport systems inner membrane
           component [Desulfobulbus propionicus DSM 2032]
 gi|320122486|gb|ADW18032.1| binding-protein-dependent transport systems inner membrane
           component [Desulfobulbus propionicus DSM 2032]
          Length = 251

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 81/222 (36%), Gaps = 16/222 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   + I L V  L  +   T   ++  +++  +     A     S  L   ++
Sbjct: 32  LPGPLPVARALAIHLPV--LGPHLVTTLTEIVLGLLLGTVLGTSTALAMIVSPLLKRWML 89

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PIL I Q+IP+       V++F      KV+ A L   F         +T S Y  +   
Sbjct: 90  PILVISQAIPVFALAPVLVLWFGYGMGSKVVMAVLIIYF--------PVTASFYGGMRRT 141

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             DL E++R            + +P ++P     + ++ +      VA    VVG+ V  
Sbjct: 142 DPDLLELARIMGARPLAVLRTIVIPAALPAFASGVRVATA------VAPIGAVVGEWVGS 195

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             G+G  +  A     +  +  A+  +  V       + R +
Sbjct: 196 SAGLGFLMLHANGRMQIDLMFAALTLLAVVSLALYFCIDRLL 237



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 10/164 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +   P +   + P   +  A P     P++V    Y   +  +   L++ F     + 
Sbjct: 76  LAMIVSPLLKRWMLPILVISQAIPVFALAPVLVLWFGYGMGSKVVMAVLIIYF----PVT 131

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            +   G      D  E+A           R I++P   P + +G   A   A   ++V E
Sbjct: 132 ASFYGGMRRTDPDLLELARIMGARPLAVLRTIVIPAALPAFASGVRVATAVAPIGAVVGE 191

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                     + GLG  +  +  +     +   + ++    LAL
Sbjct: 192 WVG------SSAGLGFLMLHANGRMQIDLMFAALTLLAVVSLAL 229


>gi|307133183|ref|YP_003885199.1| Urea carboxylase-related ABC transporter permease [Dickeya dadantii
           3937]
 gi|306530712|gb|ADN00643.1| Urea carboxylase-related ABC transporter, permease protein [Dickeya
           dadantii 3937]
          Length = 270

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + + LR+L+ + +S L   V+  L      +   L P++ +   IP L  L    
Sbjct: 72  LWVDTAASLLRLLTGVGLSALLALVFGLLCGALPSVRATLSPLITLFALIPPLAVLPVLF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           E++ +  I       +   +   + ++P++    +++      Q  
Sbjct: 132 IVFGLG--------EVSKVVLIMVGITPFIIRDLQLYIQSLPQEQLVKAQTLGGHSGQIL 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P  MP L+  + +S+S  W F++        + +    G+G  I L  +   +  
Sbjct: 184 WRVILPQLMPRLLDAVRLSLSSAWLFLI------AAEAIAATEGLGYRIFLMRRYLAMDV 237

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  +  +  + FL D LL
Sbjct: 238 ILPYVAWITALAFLLDVLL 256



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + +++++ +  G+  G  P + + + P   L A  P     P++      
Sbjct: 77  AASLLRLLTGVGLSALLALVFGLLCGALPSVRATLSPLITLFALIPPLAVLPVLFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G   +I+ ++     + P +    A +      +    +ILP + 
Sbjct: 137 GEVSK----VVLIMVGITPFIIRDLQLYIQSLPQEQLVKAQTLGGHSGQILWRVILPQLM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     +   AW   I +           T GLG  I       +   ++  V  + 
Sbjct: 193 PRLLDAVRLSLSSAWLFLIAA------EAIAATEGLGYRIFLMRRYLAMDVILPYVAWIT 246

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 247 ALAFLLDVLL 256


>gi|289578808|ref|YP_003477435.1| binding-protein-dependent transporters inner membrane component
           [Thermoanaerobacter italicus Ab9]
 gi|297545028|ref|YP_003677330.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|307265980|ref|ZP_07547528.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
 gi|289528521|gb|ADD02873.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter italicus Ab9]
 gi|296842803|gb|ADH61319.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|306919044|gb|EFN49270.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 212

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A++I++        L AK       ++ + + +Q+IP L  L F V +          
Sbjct: 28  VMALIIAIAIGVPLGILIAKFPSTSSFVIGLANAVQAIPSLALLGFLVPFLGIGSTP--- 84

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                +I  I    +  +  + Y  L NI + + E  +   ++  Q    + +P ++P +
Sbjct: 85  -----SIVMIVMYTLLPIIKNTYTGLVNIDKAILEAGKGMGMTEIQLMRMVQLPLALPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++      F   + +I  G       G+G  I   I   +   IL   +  + + 
Sbjct: 140 MAGIRIAAVTAVGFTTLAALIGAG-------GLGQLIYRGISMVNNQMILAGAIPAMILA 192

Query: 253 FLYDQLLF 260
            L D +L 
Sbjct: 193 LLIDYILL 200



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ +IIA  I +P+GI I   P  SS +   A  + A P+      +V  +       + 
Sbjct: 28  VMALIIAIAIGVPLGILIAKFPSTSSFVIGLANAVQAIPSLALLGFLVPFLGIG----ST 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++  T   I+ N   G         E      +T  +  R + LP   P  + G 
Sbjct: 84  PSIVMIVMYTLLPIIKNTYTGLVNIDKAILEAGKGMGMTEIQLMRMVQLPLALPVIMAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + ++ +   G       GLG  I       +   ++ G +      L ++
Sbjct: 144 RIAAVTAVGFTTLAALIGAG-------GLGQLIYRGISMVNNQMILAGAIPAMILALLID 196

Query: 571 RFL 573
             L
Sbjct: 197 YIL 199


>gi|269955243|ref|YP_003325032.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
 gi|269303924|gb|ACZ29474.1| binding-protein-dependent transport systems inner membrane
           component [Xylanimonas cellulosilytica DSM 15894]
          Length = 287

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 93/272 (34%), Gaps = 24/272 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-------QETTVPRDIVDIVPITLD 57
           ++ P   +R            + V  +  I + G        +  + P  +V      + 
Sbjct: 24  DVRPAARTRLRLGRPIKGAGLLGVTALALIWVVGAATGFIDPRVLSAPWTVVTTGADLIA 83

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L +    +  R    +   +    V A +A  SR    +L   + + +SIP L  L 
Sbjct: 84  DGRLQENLLVSLHRSALGLFFGVSIGLVLALIAGLSRLGDALLDGPIQVKRSIPNLALLP 143

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +++F           E   +  I       +    +  L +I     E++ +  L   
Sbjct: 144 LLILWFGIG--------EEMKVITIAIGVFLPIYIHTHNGLRSIDARFVELAETVSLPRA 195

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++PG +  +  +++G    +V  E +          GIG  + LA     
Sbjct: 196 QFIRRVVLPGALPGFLLGLRFAVTGSMLALVVVEQV------NATAGIGYMMELARTYGQ 249

Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
              I+  ++    + F  D   +LL R  + W
Sbjct: 250 TDVIVVGLVVYGVLGFSADSAVRLLQRRALSW 281



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 10/236 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R     R                +  L          +   +       +          
Sbjct: 26  RPAARTRLRLGRPIKGAGLLGVTALALIWVVGAATGFIDPRVLSAPWTVVTTGADLIADG 85

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +++ R  + +     I + + +  G      + +    Q+  + P     PL+
Sbjct: 86  RLQENLLVSLHRSALGLFFGVSIGLVLALIAGLSRLGDALLDGPIQVKRSIPNLALLPLL 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +               + +  G    I  +   G  +    F E+A +  +   ++ R +
Sbjct: 146 ILWFGIG----EEMKVITIAIGVFLPIYIHTHNGLRSIDARFVELAETVSLPRAQFIRRV 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +LPG  P ++ G   A  G+  A +V E  +       T G+G  +  +   G   
Sbjct: 202 VLPGALPGFLLGLRFAVTGSMLALVVVEQVN------ATAGIGYMMELARTYGQTD 251


>gi|27381200|ref|NP_772729.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354367|dbj|BAC51354.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 255

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 84/222 (37%), Gaps = 11/222 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIW 401
           ++ ++   V  G A  +     G++ +    Q V +        T+ R+     IA ++ 
Sbjct: 20  VIAVWQGLVSFGFAPAVLLPPPGFVFSRLLQQLVTWTFQQEIAATLIRLFAGFAIAVVLG 79

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +GI     P I + ++P  ++LA  P    +P ++  + + H +       L+     
Sbjct: 80  VSIGIAAAASPAIDAVVRPIVRVLAPLPKVALYPALLLLLGFGHGSK----ITLVAADAL 135

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + IL +   GAS         A +     +     ++LP   P  +TG       +    
Sbjct: 136 FPILLSTYYGASTVEQKLIWSAMAAGTPRYEVLFKVVLPAAMPSILTGCRIGLVISCIVV 195

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            ++E+ +       T GLG  +  +       ++ + ++ + 
Sbjct: 196 FLAEMIT------STDGLGHALVTAARTFQAVDMFVPLITIS 231



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 91/244 (37%), Gaps = 20/244 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVI------GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           ++ RI P+   L    +V+      G+++           P  +   +   L   +  Q 
Sbjct: 1   MTPRILPSNVLLGIAPIVLVIAVWQGLVSFGFAPAVLLPPPGFVFSRLLQQLVTWTFQQE 60

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + T +R+ +   I+++        AA S  +  V+ PI+ ++  +P +      ++   
Sbjct: 61  IAATLIRLFAGFAIAVVLGVSIGIAAAASPAIDAVVRPIVRVLAPLPKVALYPALLLLLG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  K        I  +    ++ +  S Y     + + L   + +     ++  + + 
Sbjct: 121 FGHGSK--------ITLVAADALFPILLSTYYGASTVEQKLIWSAMAAGTPRYEVLFKVV 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP ++    + +      V  +EMI   D      G+G  +  A +    + +   
Sbjct: 173 LPAAMPSILTGCRIGLVISCIVVFLAEMITSTD------GLGHALVTAARTFQAVDMFVP 226

Query: 245 MLTM 248
           ++T+
Sbjct: 227 LITI 230


>gi|163758621|ref|ZP_02165708.1| putative permease abc transporter protein [Hoeflea phototrophica
           DFL-43]
 gi|162283911|gb|EDQ34195.1| putative permease abc transporter protein [Hoeflea phototrophica
           DFL-43]
          Length = 289

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 90/274 (32%), Gaps = 14/274 (5%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F + +   +      + + R       +    N  +  +       +  GV  G    S+
Sbjct: 5   FLTAILFWLAAWAVNVWLARLKPKNPSVTRLINVIIPVLFGAALIALWEGVTRGFNVPSV 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFR-----VVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
                   +  +L    +      +     V+   ++   I     I +   P +   + 
Sbjct: 65  LLPAPSMIWGRILSSAHILWADFQQTYLKAVIAGYVMGCGIGFITAILVDRSPFLRKGVI 124

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P   L+AA P     P++V    +   +     + +++  T + +L N +AG +A  +  
Sbjct: 125 PVGNLVAALPIVGVAPIMVMWFGFDWQSK----AAVVVVMTFFPMLVNTVAGLAATGSME 180

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++  ++  T W+    + LP   P+           A   +IV+E      +     G+
Sbjct: 181 RDLMRTYAATRWQTLFKLRLPAAMPFIFNALKINSTLALIGAIVAEFFGTPIV-----GM 235

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I+    + +   V   + +           +
Sbjct: 236 GFRISTEVGRMNVDMVWATIFVAALAGSLSYGLI 269



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 16/203 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++  V+     F+ A L  +S  L   ++P+ +++ ++PI+G     V++F   +  K 
Sbjct: 95  VIAGYVMGCGIGFITAILVDRSPFLRKGVIPVGNLVAALPIVGVAPIMVMWFGFDWQSKA 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++  + WQ  + L +P +MP 
Sbjct: 155 A--------VVVVMTFFPMLVNTVAGLAATGSMERDLMRTYAATRWQTLFKLRLPAAMPF 206

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  +   ++  +   +      
Sbjct: 207 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWATIFVAALA 261

Query: 252 IFLYDQLLF---RPMIVWSNKFR 271
             L   L+    R +  W   +R
Sbjct: 262 GSLSYGLIALAERAVTFWHPSYR 284


>gi|50365050|ref|YP_053475.1| phosphate ABC transporter permease component [Mesoplasma florum L1]
 gi|50363606|gb|AAT75591.1| phosphate ABC transporter permease component [Mesoplasma florum L1]
          Length = 715

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 73/499 (14%), Positives = 163/499 (32%), Gaps = 35/499 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGFLTFT--- 119
            +  +  + IS+LF                S  +   ++ ++ ++ S+P + F  F    
Sbjct: 88  IIMTIVLLTISMLFAIPLTIFTTLFISEYLSVGMQKKVLTVIKLLASVPSVVFGLFARDQ 147

Query: 120 -VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               F  +         +A++   F +    ++ S Y ++ ++P      S    +S  Q
Sbjct: 148 IGALFQLMGAPNNDNLMVASMTMTFMAAPTMISLS-YNAVQSVPEGYRLGSLGLGISKEQ 206

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV--IPLPGIGSYIALAIKEQ 236
             + +    +   ++  +++ M+      +A  MI    T   I   GI  ++  +I+  
Sbjct: 207 TTFKIIRKSASAKIISAIILGMARVIGETMAIMMIAGNSTGGFITNSGISGFLFSSIRTL 266

Query: 237 DLLAILY-----------AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV 285
                L            A+  +  ++FL   ++   ++  SN   ++ +  I   +   
Sbjct: 267 AATIGLEMTENSGSTHQSALYAIGLILFLLVFIINIVILFMSNVDNIKYSRRIKREEKLN 326

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
               RK    +++          L   V          + +       +  +  +     
Sbjct: 327 SNSSRKIKTPKYVYDKKM-----LGMMVHNRTENKFFKKTYSAVMLFLMWISTAIIISFT 381

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            +    V    +      I +I      +    +      T+  VV  +I A    +   
Sbjct: 382 FWILGDVIIKGLMGLSDPIAFIHMDTENRTGGGIFAALFTTILLVVCTLIFAIPFALGAA 441

Query: 406 IWIGFRPH----ISSKIQPFAQLLAAFPANVFFPLVV-SCVSYYHLNPNLWLSLLMIFGT 460
           I++         ++   +    LLA+ P+ VF    +   +    L  ++  + L +   
Sbjct: 442 IYLNEYARQSSVLTKSFRFAINLLASTPSIVFGIFGLSIFIVLLGLPFSILAAGLTMTVV 501

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
              +L  N        P+ ++E  S+  +T  +    IILP      +TG I A      
Sbjct: 502 VLPMLISNFEDALQQVPHQYREAGSALGLTKIQTLFKIILPNAMEGIITGIILAMAKIIG 561

Query: 520 ASIVSEVASWGHIHLRTTG 538
            S    +     I + T G
Sbjct: 562 ESAPIYLTLGTDIQMPTQG 580



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 72/177 (40%), Gaps = 6/177 (3%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             + ++++ G+   + P   + +         +      T L ++  ++ ++ F    A 
Sbjct: 383 WILGDVIIKGLMGLSDPIAFIHMDTENRTGGGIFAALFTTILLVVCTLIFAIPFALGAAI 442

Query: 89  L----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A +S  L       ++++ S P + F  F +  F+ L    +  + LAA   +  
Sbjct: 443 YLNEYARQSSVLTKSFRFAINLLASTPSIVFGIFGLSIFIVLL--GLPFSILAAGLTMTV 500

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +  +  +   +L  +P    E   +  L+  Q  + + +P +M G++  ++++M+
Sbjct: 501 VVLPMLISNFEDALQQVPHQYREAGSALGLTKIQTLFKIILPNAMEGIITGIILAMA 557


>gi|107028482|ref|YP_625577.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116686477|ref|YP_839724.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105897646|gb|ABF80604.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116652192|gb|ABK12831.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 238

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 74/179 (41%), Gaps = 16/179 (8%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV  ++ I+  G          +           L  YA +  L ++ +M +++      
Sbjct: 8   LVGSLVAIIAVGWALARG----IGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPA 63

Query: 87  ATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
             L ++ R   +    +  + +I  +IP L  L   +  F            + AI A+F
Sbjct: 64  GVLLSRPRFQHQAERFMQ-VFNIGNTIPSLAVLAIALGIFGIGN--------VPAIVALF 114

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            + +  +T + Y+ + N+P  L E ++   ++GWQ    + +P ++P +V  +  +++ 
Sbjct: 115 LASLLPVTRNAYEGMKNVPAALREAAKGIGMTGWQSLLRVELPNALPIIVGGVRTALAI 173



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 15/224 (6%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               I + W     I     +Q    + +     M  VV  + +A  + +P G+ +  RP
Sbjct: 12  LVAIIAVGWALARGIGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLL-SRP 70

Query: 413 HISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + + F Q+       P+     + +          N+   + +   +   +  N  
Sbjct: 71  RFQHQAERFMQVFNIGNTIPSLAVLAIALGIFGIG----NVPAIVALFLASLLPVTRNAY 126

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P   +E A    +TGW+    + LP   P  V G  TA       + ++     
Sbjct: 127 EGMKNVPAALREAAKGIGMTGWQSLLRVELPNALPIIVGGVRTALAINVGTAPLA----- 181

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +    LG+ I       + P ++LG  +     L L+  +
Sbjct: 182 --YLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALVLDGIV 223


>gi|313887855|ref|ZP_07821535.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846198|gb|EFR33579.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 214

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 76/193 (39%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +         A+ R+L  + + I ++MQ+IP L  L   +++ + 
Sbjct: 20  IRHFLISVYGVLFAAIVAIPLGFAVARKRKLSRLTISIANVMQTIPSLAMLAI-LMFLIG 78

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             P  V       +FA+F   +  +  +    + ++  +L + ++   ++ +Q    + +
Sbjct: 79  TGPNTV-------VFAVFLYAILPILKNTVGGINSVTPELVDAAKGMGMTKYQIMRKVEL 131

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +          +V +  +    T I   G+G  I   I   +   I+ A 
Sbjct: 132 PLAISIIMGGIR-------NALVLAIGVTAVGTFIGAGGLGDIITRGITVANGSPIIIAG 184

Query: 246 LTMLGVIFLYDQL 258
                ++ +    
Sbjct: 185 AIPTALMAVLADF 197



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 12/194 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV           V  ++ A+I+ IP+G  +  +  +S      A ++   P+     ++
Sbjct: 14  YVFEQFIRHFLISVYGVLFAAIVAIPLGFAVARKRKLSRLTISIANVMQTIPSLAMLAIL 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          +   +       IL N + G ++   +  + A    +T ++  R +
Sbjct: 74  MFLIGTGPNT----VVFAVFLYAILPILKNTVGGINSVTPELVDAAKGMGMTKYQIMRKV 129

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES-TEKGSFPEVV 556
            LP      + G   A   A   + V      G       GLG  I    T     P ++
Sbjct: 130 ELPLAISIIMGGIRNALVLAIGVTAVGTFIGAG-------GLGDIITRGITVANGSPIII 182

Query: 557 LGVLIMCCFVLALN 570
            G +      +  +
Sbjct: 183 AGAIPTALMAVLAD 196


>gi|300782192|ref|YP_003762483.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299791706|gb|ADJ42081.1| permease component of ABC-type sulfonate/nitrate/taurine transport
           system [Amycolatopsis mediterranei U32]
          Length = 295

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 18/271 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +  +  +  +       K  R + ++R      +L         ++   F+         
Sbjct: 15  VLETEQDILARAKQASAKRKRNIWLLRLAIVVVWLGSWELTATYWIDPFFYSKPSKIWER 74

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            + W S G         D   + +   +T+    +  +I +I  +  G+ +G   +++  
Sbjct: 75  LVEWFSAG--------TDFGSIWYQILVTVEEAAIGFVIGAIFGVVFGVVLGRSSYLAQV 126

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + PF +   A P  V   L V        +    + +L+ F       FN   GA     
Sbjct: 127 LAPFIKAANALPRIVLAALFVIWFGLGLSSKVATVVVLVFFAVF----FNAFTGAREVDR 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +  + A     T  +  + I+LP    + ++    A G A   ++V E            
Sbjct: 183 NLIDNARILGATRGQVLKSIVLPSATSWILSSLHVAFGFALIGAVVGEY------TGAKA 236

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G+G  IA +        V  G+LI+    L 
Sbjct: 237 GMGFLIANAQGTFDTAGVYAGMLIITVVALL 267



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 77/207 (37%), Gaps = 14/207 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +V+      D  S+      T        VI  +F  V+  +  +S  L  VL P +   
Sbjct: 75  LVEWFSAGTDFGSIWYQILVTVEEAAIGFVIGAIFGVVFGVVLGRSSYLAQVLAPFIKAA 134

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            ++P +      V++F      KV    +   FA+F +               + R+L +
Sbjct: 135 NALPRIVLAALFVIWFGLGLSSKVATVVVLVFFAVFFNAFT--------GAREVDRNLID 186

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R    +  Q    + +P +   ++ ++ ++     F ++ +   VVG+      G+G 
Sbjct: 187 NARILGATRGQVLKSIVLPSATSWILSSLHVAFG---FALIGA---VVGEYTGAKAGMGF 240

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFL 254
            IA A    D   +   ML +  V  L
Sbjct: 241 LIANAQGTFDTAGVYAGMLIITVVALL 267


>gi|12003349|gb|AAG43531.1|AF211851_2 OpuCB [Listeria monocytogenes]
          Length = 195

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 78/197 (39%), Gaps = 15/197 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+  ++  + +S      +   +  I  G       G+G +I   +     
Sbjct: 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRP 177

Query: 239 LAILYAMLTMLGVIFLY 255
             IL   + +  +  + 
Sbjct: 178 DLILGGAIPVTILALVV 194



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +P GI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++     G       GLG +I           ++ G + +    
Sbjct: 139 MAGIRLSAVYVIAWATLASYIGAG-------GLGDFIFNGLNLYRPDLILGGAIPVTILA 191

Query: 567 LALN 570
           L + 
Sbjct: 192 LVVE 195


>gi|313896570|ref|ZP_07830119.1| ABC transporter, substrate-binding protein, QAT family [Selenomonas
           sp. oral taxon 137 str. F0430]
 gi|312974755|gb|EFR40221.1| ABC transporter, substrate-binding protein, QAT family [Selenomonas
           sp. oral taxon 137 str. F0430]
          Length = 515

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 15/180 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                    SA+ I+L+       L ++  R     + +++ + ++P +  L F + +F 
Sbjct: 22  TLEHLWISASAIGIALVVGGAAGILISRYERAVQPTLGVVNFLYTVPSISMLGFLIPFFG 81

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       AAI A+    +  M  + +  L  + R L E +     +      ++ 
Sbjct: 82  VGNT--------AAIIALTVYALLPMVRATHTGLAQVDRSLIEAAIGMGGTPIYVLVHVE 133

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +          V  +  +    + I   G+G  I   I   +    +  
Sbjct: 134 LPLALPIIMSGIR-------NMVTMTVALAGIASFIGAGGLGVAIYRGITTNNPALTIAG 186



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 11/181 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    ++     I IA ++    GI I                L   P+      +
Sbjct: 17  FFLQLTLEHLWISASAIGIALVVGGAAGILISRYERAVQPTLGVVNFLYTVPSISMLGFL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + L++  +      ++     G +       E A     T      ++
Sbjct: 77  IPFFGVGNTAAIIALTVYALL----PMVRATHTGLAQVDRSLIEAAIGMGGTPIYVLVHV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G         N   ++   +     +   GLG  I       +    + 
Sbjct: 133 ELPLALPIIMSGIR-------NMVTMTVALAGIASFIGAGGLGVAIYRGITTNNPALTIA 185

Query: 558 G 558
           G
Sbjct: 186 G 186


>gi|307297591|ref|ZP_07577397.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916851|gb|EFN47233.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 220

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 8/171 (4%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL-WLSLLMIFG 459
            +P+GI +      SS     A +L   P+   F  +V  ++       +    + ++  
Sbjct: 36  GVPIGIVVSRSKRASSIALYGAGILMTIPSLALFGYMVVLLAPLKAGIGVTPAVIALVIY 95

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   ++ N +   ++      E A    +T W+    + LP   P  + G         N
Sbjct: 96  SFLPVIRNTVVAVNSVDPRMIEAARGMGMTNWQILFRVRLPLTIPIIMAGVR-------N 148

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A+++    +     +   GLG +I     + +F  V+LG LI+    +  N
Sbjct: 149 AAVMGVSVATIAYLIGARGLGYFIFSGLGRSNFNMVLLGALIVSILGIGTN 199



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 65/171 (38%), Gaps = 10/171 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 + ++S+R   + +    I+ +IP L    + VV    L  G  +     A+ A+
Sbjct: 36  GVPIGIVVSRSKRASSIALYGAGILMTIPSLALFGYMVVLLAPLKAGIGV---TPAVIAL 92

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                  +  +   ++ ++   + E +R   ++ WQ  + + +P ++P ++  +  +   
Sbjct: 93  VIYSFLPVIRNTVVAVNSVDPRMIEAARGMGMTNWQILFRVRLPLTIPIIMAGVRNAAVM 152

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           G      + +I          G+G +I   +   +   +L   L +  +  
Sbjct: 153 GVSVATIAYLI-------GARGLGYFIFSGLGRSNFNMVLLGALIVSILGI 196


>gi|306833542|ref|ZP_07466669.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424312|gb|EFM27451.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 305

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 31/268 (11%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMV 77
             ++V  +  IL+   Q+      +  + P+T       D  S    A    L   +  +
Sbjct: 31  LVLIVFIVAMILIFVAQKGLSTFFVDGVNPLTFLFGSKWDPSSGSFGALPMILGSFTVTI 90

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           +S L     A  AA        +    +L P ++++  IP + +    L   V +  +++
Sbjct: 91  LSALIATPIAIGAAVFMTEVSPKYGAKILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIF 150

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  
Sbjct: 151 GGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYKEASLAMGATRWQTIWRVILNA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAI 233
           + PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   +
Sbjct: 210 ARPGIFTAIIFGMARAFGEALAIQMVVGNSAVVPNSLTTPAATLTSVLTMGIGNTVMGTV 269

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   L ++   +L M     +  + + R
Sbjct: 270 QNNVLWSLALVLLIMSLGFNMLVKFITR 297



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 25/231 (10%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI--GFRPHIS 415
           G+   +  +             + +   +    ++  +IA+ I I   +++      + +
Sbjct: 57  GVNPLTFLFGSKWDPSSGSFGALPMILGSFTVTILSALIATPIAIGAAVFMTEVSPKYGA 116

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             +QP  +LL   P+ V+         P V S            + +L +      + F 
Sbjct: 117 KILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFM 175

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +    A P  +KE + +   T W+    +IL    P   T  I     A+  ++  ++ 
Sbjct: 176 TVDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAIIFGMARAFGEALAIQMV 235

Query: 528 SWGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                               + T G+G  +  + +      + L +LIM  
Sbjct: 236 VGNSAVVPNSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|238025061|ref|YP_002909293.1| glycine betaine/L-proline ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237879726|gb|ACR32058.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 217

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 81/200 (40%), Gaps = 10/200 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L Q   +    +  A+  +++       + ++   L   L+ I  ++ ++P +   
Sbjct: 10  NWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVILTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G      + AI A+F   +  +  + Y +L N+   ++E      ++ 
Sbjct: 70  GLMIPIFSRFGQGI---GAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGMTS 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++      +  + +I  G       G+GS I  AI + 
Sbjct: 127 WQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGSLIVRAIGQS 179

Query: 237 DLLAILYAMLTMLGVIFLYD 256
            ++ +L   + +  +  + D
Sbjct: 180 SMMKLLVGAVLVSVLAIVAD 199



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V  +   +   ++ L    ++ V + +  A +  +P+GI I     ++  +   A ++  
Sbjct: 3   VQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVILT 62

Query: 428 FPANVFFPLVVSCVSYYHLNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +      +     +   +   I+ N            KE     
Sbjct: 63  LPSIALFGLMIPIFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGI 122

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T W+  R + LP   P  + G  TA         ++ V   G       GLG+ I  +
Sbjct: 123 GMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGSLIVRA 175

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
             + S  ++++G +++    +  +
Sbjct: 176 IGQSSMMKLLVGAVLVSVLAIVAD 199


>gi|208434732|ref|YP_002266398.1| osmo protection protein [Helicobacter pylori G27]
 gi|208432661|gb|ACI27532.1| osmo protection protein [Helicobacter pylori G27]
          Length = 553

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + Y++  F +   +Y I L       V +   +  +  + +G++  +   
Sbjct: 29  LVAIVLKISVVKYLIKEF-HDRFIYFIDLLAQHFIIVALSGFLVLVFGVLIGVFAFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+++      
Sbjct: 88  ARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVYSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVHFLLAIPQILAGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +    A  + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSGFLVLVFGVLIGVFAFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  + +S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVYSTYNALKEVREEVIKAAIGLGCNPKELFFRVHFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILAGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|310639922|ref|YP_003944680.1| hydroxymethylpyrimidine transport system permease protein
           [Paenibacillus polymyxa SC2]
 gi|309244872|gb|ADO54439.1| Hydroxymethylpyrimidine transport system permease protein
           [Paenibacillus polymyxa SC2]
          Length = 258

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 16/262 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           + ++P +  +L F+         LH I+   +P   + +         L  +   T    
Sbjct: 12  KSVWPPLVAVLFFLAAWQGAVNYLH-IESWLLPAPSLIVQEGMAQSALLGTHTWATVRLT 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   I      + A +      L   L P+L + Q+IPI+      +V+F      K++
Sbjct: 71  LAGFAIGTATGLLIAIVLHTIPFLKSALYPLLILSQNIPIIALGPLLMVWFGFGVLPKLM 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +  + +          L    R +    R    S    F  L +P S+P +
Sbjct: 131 VITLVCFFPVAVAAM--------DGLTRTDRMMMNYMRMSGASRRAIFLKLELPHSLPQV 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      + +E I   +      GIG Y+ L         I  A+  ++ + 
Sbjct: 183 FSGVKIAATYSVMGAIIAEWIGASE------GIGYYMLLQKSAYRTDLIFAAIGIIVALS 236

Query: 253 FLYDQLLFRPMIVWSNKFRLER 274
            L   ++   +  W  +++ ++
Sbjct: 237 LLMFVVIL-LLEKWLVRWKPDQ 257



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 70/244 (28%), Gaps = 14/244 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             +    +     +  +F+     G    +  +S          Q+ +    L     + 
Sbjct: 6   KNVSWWKSVWPPLVAVLFFLAAWQGAVNYLHIESWLLPAPSLIVQEGMAQSALLGTHTWA 65

Query: 390 VVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
            V L +    I    G+ I       P + S + P   L    P     PL++    +  
Sbjct: 66  TVRLTLAGFAIGTATGLLIAIVLHTIPFLKSALYPLLILSQNIPIIALGPLLMVWFGFG- 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++     + +    + G +               +    +  + LP   P 
Sbjct: 125 ---VLPKLMVITLVCFFPVAVAAMDGLTRTDRMMMNYMRMSGASRRAIFLKLELPHSLPQ 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   A   +   +I++E          + G+G Y+           +   + I+   
Sbjct: 182 VFSGVKIAATYSVMGAIIAEWIG------ASEGIGYYMLLQKSAYRTDLIFAAIGIIVAL 235

Query: 566 VLAL 569
            L +
Sbjct: 236 SLLM 239


>gi|289434709|ref|YP_003464581.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170953|emb|CBH27495.1| glycine betaine/L-proline ABC transporter, permease protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313633268|gb|EFS00132.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria seeligeri FSL N1-067]
 gi|313637856|gb|EFS03187.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria seeligeri FSL S4-171]
          Length = 223

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++   +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIVAIPLGVYIARKKRLAGWVIQTANIIQTIPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLHLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
                + +   LL 
Sbjct: 189 IPTAFMAILADLLL 202



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+I+ IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIVAIPLGVYIARKKRLAGWVIQTANIIQTIPALAMLAVLMLVMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+    I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLHLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + +      G       GLG  I   T   +   ++L   I   F+  L 
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAFMAILA 198

Query: 571 RFLWHPLYLYGTRCL 585
                 L  +  R L
Sbjct: 199 DL----LLGWVERRL 209


>gi|329113532|ref|ZP_08242313.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326697357|gb|EGE49017.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 255

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 87/242 (35%), Gaps = 6/242 (2%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P   + + +   V  +  + W  V     I          + H    ++  +      T+
Sbjct: 2   PARLISIFAPLAVGILFLLLWQGVCYFWHIPPYLMPAPSDIAHSLASNIGTLCHALYSTL 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +V ++++ ++ + V   +   P I   + P+  L+   P     PL++  V    L 
Sbjct: 62  TVTLVALLVSVVLGVLVAFVLVQHPLIERSLMPYVVLMQVTPVVALAPLIIILVKTTFLA 121

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             +  +L+ IF     I+ N + G  +              +  +    + +P   P ++
Sbjct: 122 LVICATLIAIF----PIISNTLQGLKSVDPGLAAFFRMHKASRLKTLLRLQIPSALPMFM 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   + G A   ++V+E  +       + GL   I ++  +   P +   + ++    L
Sbjct: 178 AGLQISSGLALVGAVVAEFVAG--TGGNSAGLAYEILQAGFQMDIPRMFAALFMITLTGL 235

Query: 568 AL 569
           AL
Sbjct: 236 AL 237



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 12/249 (4%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           +P  +     P    +L  +L  G+             P DI   +    ++ +L     
Sbjct: 1   MPARLISIFAPLAVGILFLLLWQGVCYFWHIPPYLMPAPSDIAHSLAS--NIGTLCHALY 58

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L A+++S++   + A +  +   +   L+P + +MQ  P++      ++     
Sbjct: 59  STLTVTLVALLVSVVLGVLVAFVLVQHPLIERSLMPYVVLMQVTPVVALAPLIIILVKTT 118

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +   VI A L AIF I +        +  Q L ++   L    R  + S  +    L +P
Sbjct: 119 FLALVICATLIAIFPIIS--------NTLQGLKSVDPGLAAFFRMHKASRLKTLLRLQIP 170

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P  +  + +S        V +E +          G+   I  A  + D+  +  A+ 
Sbjct: 171 SALPMFMAGLQISSGLALVGAVVAEFVAGTGGNSA--GLAYEILQAGFQMDIPRMFAALF 228

Query: 247 TMLGVIFLY 255
            +       
Sbjct: 229 MITLTGLAL 237


>gi|326789655|ref|YP_004307476.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540419|gb|ADZ82278.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 270

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V+     T+ R  V  +I +     + + +     +     P+  L+   P     P+V+
Sbjct: 70  VMTSAGETLLRAGVGFLIGAACGFVLALLMNLSGVVEKVAFPYLMLIQMIPILGMAPIVL 129

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +     + +  +  ++L    T + +  N +AG  +   +  E+  +   + +  ++ ++
Sbjct: 130 AVTKDINKSRIIIAAIL----TFYPVCTNTLAGFKSVEREKHELMYALAASKYEIYKKLM 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY+ TG   +   A  ASI+ +    G       GLG  +++S +      V   
Sbjct: 186 IPSCIPYFFTGLKISAPMAITASILVDTLQGGG------GLGCMLSQSLKHAMSIYVFWQ 239

Query: 559 VLIMCCFV 566
           ++     +
Sbjct: 240 IVFFSAII 247



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 14/190 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T LR     +I     FV A L   S  +  V  P L ++Q IPILG     +    
Sbjct: 74  AGETLLRAGVGFLIGAACGFVLALLMNLSGVVEKVAFPYLMLIQMIPILGMAPIVLAVTK 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++   ++I A +   + + T        +      ++ R+  E+  +   S ++ +  L 
Sbjct: 134 DINKSRIIIAAILTFYPVCT--------NTLAGFKSVEREKHELMYALAASKYEIYKKLM 185

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +P     + +S       + AS ++   DT+    G+G  ++ ++K    + + + 
Sbjct: 186 IPSCIPYFFTGLKIS---APMAITASILV---DTLQGGGGLGCMLSQSLKHAMSIYVFWQ 239

Query: 245 MLTMLGVIFL 254
           ++    +I +
Sbjct: 240 IVFFSAIIGI 249


>gi|215487352|ref|YP_002329783.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|215265424|emb|CAS09825.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
          Length = 385

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLA 236

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P   +          A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 VQRFLHVQLPLALPVFLHSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLHSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|291617523|ref|YP_003520265.1| YehW [Pantoea ananatis LMG 20103]
 gi|291152553|gb|ADD77137.1| YehW [Pantoea ananatis LMG 20103]
 gi|327393960|dbj|BAK11382.1| inner membrane ABC transporter permease protein YehW [Pantoea
           ananatis AJ13355]
          Length = 238

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    +  +M+ +LL       L ++   RR    ++ I ++  ++P L  L  
Sbjct: 40  LIYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  A+ A+F + +  +  + Y  L  +P  L E +    ++ WQ
Sbjct: 100 AMVVIGIG--------DKPALVALFLASLLPVVRNTYSGLSAVPPSLIEAANGIGMTKWQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 152 RLRQVEIPNALPVILAGVRIA--TAINVGTAPLAFLIGASSF-----GELIFPGIYLNDF 204

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++   +    V  + D LL
Sbjct: 205 PVLILGAVATALVALVLDMLL 225



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 13/197 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPL 436
           +I+LG   +F V   ++ A ++ IP GI +        +  +     +    P      L
Sbjct: 40  LIYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +        + L       +   ++ N  +G SA P    E A+   +T W+  R 
Sbjct: 100 AMVVIGIGDKPALVAL----FLASLLPVVRNTYSGLSAVPPSLIEAANGIGMTKWQRLRQ 155

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P   P  + G   A       + ++ +          +  G  I        FP ++
Sbjct: 156 VEIPNALPVILAGVRIATAINVGTAPLAFLIG-------ASSFGELIFPGIYLNDFPVLI 208

Query: 557 LGVLIMCCFVLALNRFL 573
           LG +      L L+  L
Sbjct: 209 LGAVATALVALVLDMLL 225


>gi|254254532|ref|ZP_04947849.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia dolosa AUO158]
 gi|124899177|gb|EAY71020.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia dolosa AUO158]
          Length = 297

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 85/248 (34%), Gaps = 18/248 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R FP      A + ++  + +    +     P    +  P+  D  SL          + 
Sbjct: 54  RRFPAYAARAAALALLLALLLRPAWLHGWFAPFAD-NGAPVIYDRASLLDLTLAHLGTVA 112

Query: 74  SAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +  I  L          +        V   ++DI Q+ P +  L   V          +
Sbjct: 113 LSSAIGTLVAVAAGIAVTRPWGADFLPVARSVVDIGQTFPPVAVLALAVPAVGFGLKPVL 172

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I   L  +  +F         S    L ++PRD+ + +R   +SGWQ+   + +P + P 
Sbjct: 173 IALVLYGLLPVFE--------STIAGLEDVPRDVVDAARGMGMSGWQRLISVELPLAFPV 224

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  + ++       VV +       + +   G+G  I   ++  +   +L   + +  +
Sbjct: 225 IVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSNTAFVLQGGVIVGLL 277

Query: 252 IFLYDQLL 259
             L    +
Sbjct: 278 AVLVSDAI 285



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +   I +++ +  GI +  RP  +  +   +    +   FP  
Sbjct: 96  DRASLLDLTLAHLGTVALSSAIGTLVAVAAGIAV-TRPWGADFLPVARSVVDIGQTFPPV 154

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  + A    ++GW
Sbjct: 155 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVVDAARGMGMSGW 210

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 211 QRLISVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 263

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 264 TAFVLQGGVIVGLLAVLV 281


>gi|15603130|ref|NP_246202.1| hypothetical protein PM1265 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721623|gb|AAK03349.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 254

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 86/209 (41%), Gaps = 17/209 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q++  T L +   + + +    + A L + S  L  +L+P+L I Q+IP+       V
Sbjct: 55  LWQHSQITLLEIGLGLFLGVSLGLISALLLSASDYLSKLLLPLLVISQAIPVFAIAPLLV 114

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      K++   L   F +  +         Y  L N      E++++ ++S     
Sbjct: 115 LWFGYGLASKIVMTILIIYFPVTAAC--------YDGLRNTSMQWLELAKTMQVSASAML 166

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P ++P     + +++S      VA    +VG+ V    G+G  +  A     +  
Sbjct: 167 FKVRLPAALPSFASGLRIAVS------VAPIGAIVGEWVGSSQGLGYLMLHANARMQVDL 220

Query: 241 ILYAMLTMLGVIFLYDQ---LLFRPMIVW 266
           +  A+L ++ +  +         R  + W
Sbjct: 221 MFSALLILMVISLVLYFSVDYFLRKWLPW 249



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+  + + + +   + +   + +    ++S  + P   +  A P     PL+V    Y 
Sbjct: 61  ITLLEIGLGLFLGVSLGLISALLLSASDYLSKLLLPLLVISQAIPVFAIAPLLVLWFGYG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +   L++ F     +      G       + E+A +  ++       + LP   P
Sbjct: 121 LASKIVMTILIIYF----PVTAACYDGLRNTSMQWLELAKTMQVSASAMLFKVRLPAALP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + +G   A   A   +IV E          + GLG  +  +  +     +   +LI+  
Sbjct: 177 SFASGLRIAVSVAPIGAIVGEWVG------SSQGLGYLMLHANARMQVDLMFSALLILMV 230

Query: 565 FVLAL 569
             L L
Sbjct: 231 ISLVL 235


>gi|306821655|ref|ZP_07455253.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304550400|gb|EFM38393.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 209

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 15/188 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V+ ++          +S++L ++L+ I  I+Q+IP L  L+  V             
Sbjct: 25  LAIVLGIIVAVPAGIAVTRSKKLSVILITIASILQTIPSLALLSMMVPIIGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +L AI A+F   +  +  +    +  +   L +  +   ++  +  + + +P S P ++
Sbjct: 78  -KLPAIIALFIYSLLPIIRNTMLGINGVNEFLVDAGKGMGMTANEIMFKIKLPLSAPVIM 136

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S      +VV+   I    + I   G+G +I   +   D   I    + +  +  
Sbjct: 137 SGIRLSA----VYVVSWTAIA---SYIGAGGLGDFIFSGLNTFDTKLIFLGTICVTIIAI 189

Query: 254 LYDQLLFR 261
             D LL +
Sbjct: 190 CTDFLLGK 197



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 11/204 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F  ++   +I      +F   + I++  I+ +P GI +     +S  +   A +L   P
Sbjct: 3   DFLRENFSQLIVKIGEHLFISSLAIVLGIIVAVPAGIAVTRSKKLSVILITIASILQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +     ++V  +        L   + +   +   I+ N + G +       +      +T
Sbjct: 63  SLALLSMMVPIIGIG----KLPAIIALFIYSLLPIIRNTMLGINGVNEFLVDAGKGMGMT 118

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  I LP   P  ++G   +     + + ++     G       GLG +I      
Sbjct: 119 ANEIMFKIKLPLSAPVIMSGIRLSAVYVVSWTAIASYIGAG-------GLGDFIFSGLNT 171

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                + LG + +    +  +  L
Sbjct: 172 FDTKLIFLGTICVTIIAICTDFLL 195


>gi|251787700|ref|YP_003002421.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
 gi|247536321|gb|ACT04942.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya zeae Ech1591]
          Length = 270

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 89/234 (38%), Gaps = 15/234 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFV 85
           L +   + LL G+         +   P       L     + + LR+L+ + +S +   V
Sbjct: 37  LAVNAADKLLPGLGAMAQAMHRMAFEPNERTGEYLLWVDTAASLLRLLTGVGLSAVLALV 96

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +  L      +   L P++ +   IP L  L    + F           E++ +  I   
Sbjct: 97  FGLLCGALPAVRAALSPLITLFALIPPLAVLPILFIVFGLG--------EVSKVVLIMVG 148

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +   +   + ++P++    +++      Q  W + +P  MP L+  + +S+S  W 
Sbjct: 149 ITPFIVRDLQLYIQSLPQEQLVKAQTLGGHSGQILWRVILPQLMPRLLDAVRLSLSSAWL 208

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           F++        + +    G+G  I L  +   +  IL  +  +  + FL D LL
Sbjct: 209 FLI------AAEAIAATEGLGYRIFLMRRYLAMDVILPYVAWITALAFLLDVLL 256



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + +++++ +  G+  G  P + + + P   L A  P     P++      
Sbjct: 77  AASLLRLLTGVGLSAVLALVFGLLCGALPAVRAALSPLITLFALIPPLAVLPILFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G   +I+ ++     + P +    A +      +    +ILP + 
Sbjct: 137 GEVSK----VVLIMVGITPFIVRDLQLYIQSLPQEQLVKAQTLGGHSGQILWRVILPQLM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     +   AW   I +           T GLG  I       +   ++  V  + 
Sbjct: 193 PRLLDAVRLSLSSAWLFLIAA------EAIAATEGLGYRIFLMRRYLAMDVILPYVAWIT 246

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 247 ALAFLLDVLL 256


>gi|89068513|ref|ZP_01155910.1| permease protein of ABC transporter [Oceanicola granulosus
           HTCC2516]
 gi|89045932|gb|EAR51992.1| permease protein of ABC transporter [Oceanicola granulosus
           HTCC2516]
          Length = 253

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 17/236 (7%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R I P +     F+    G + +          P D+++ + +  D   + ++A  T   
Sbjct: 5   RHILPAVVLAAVFLGGWEGYVRLTAVSPLVLPAPSDVLNGLRVEGD--DISRHALATVGV 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                 +S+ F  V +     +  L   ++P+L   Q++PI+      V++F        
Sbjct: 63  ASLGFGLSVSFALVVSVALHFAGLLRRGVMPLLVASQTVPIVALAPLMVLWFGFGL---- 118

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L  +  +     + M  S+      +P    +   S     WQ F    +P +   
Sbjct: 119 ----LPKVLLVILVTFFPMVVSLMTGYGQVPHAFRDQLVSMGAGPWQVFRRATLPSARAH 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               + +S +      + +E            G+G YI  A        +L A+  
Sbjct: 175 FFAGLRISATYAIVATIFAEYAG------ARQGLGIYILTAKNNFRADLVLSAVAV 224



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 10/179 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+    +   ++    + V + + F   +   + P        P     PL+V    
Sbjct: 56  ALATVGVASLGFGLSVSFALVVSVALHFAGLLRRGVMPLLVASQTVPIVALAPLMVLWFG 115

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L       LL+I  T + ++ +++ G    P+ F++   S     W+ +R   LP  
Sbjct: 116 FGLL----PKVLLVILVTFFPMVVSLMTGYGQVPHAFRDQLVSMGAGPWQVFRRATLPSA 171

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             ++  G   +   A  A+I +E A          GLG YI  +        V+  V +
Sbjct: 172 RAHFFAGLRISATYAIVATIFAEYAGARQ------GLGIYILTAKNNFRADLVLSAVAV 224


>gi|331087310|ref|ZP_08336379.1| hypothetical protein HMPREF0987_02682 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408401|gb|EGG87872.1| hypothetical protein HMPREF0987_02682 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 257

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            Y+     +T+    + +    +        +G    + + ++P    +   P     PL
Sbjct: 54  GYIFPHLKVTLCAAFLGLFYGIVFGTLTAFLVGNNKVLINILEPVFVGIHGLPLLALGPL 113

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            V        +       +      + + FNV AG                 +  +    
Sbjct: 114 FVVWFGIGMKSK----IFMATINVFFLVFFNVYAGVKDVDVQLINTLKLMRASKLQIMLK 169

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +I+P   P+ +       G A   +IV E          + GLG  I  +    +   V+
Sbjct: 170 VIMPSCIPWLIASLKAGVGAAVLGAIVGEYLG------ASAGLGWIIQTAGGYYNITRVI 223

Query: 557 LGVLIMCCFVLALNRFL 573
             VL++   +  L+  +
Sbjct: 224 ACVLVLMVIMFILDAIV 240



 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 90/239 (37%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+  V++   ++          + P+ +   +        +  +   T       +   +
Sbjct: 16  LVILVVIWQFLSEKGMINQMFFSSPKAVWQDLKEMFGSGYIFPHLKVTLCAAFLGLFYGI 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +F  + A L   ++ L  +L P+   +  +P+L      VV+F      K+  A +   F
Sbjct: 76  VFGTLTAFLVGNNKVLINILEPVFVGIHGLPLLALGPLFVVWFGIGMKSKIFMATINVFF 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F        F++Y  + ++   L    +  R S  Q    + +P  +P L+ ++   +
Sbjct: 136 LVF--------FNVYAGVKDVDVQLINTLKLMRASKLQIMLKVIMPSCIPWLIASLKAGV 187

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  +  E +          G+G  I  A    ++  ++  +L ++ ++F+ D ++
Sbjct: 188 GAAVLGAIVGEYLGASA------GLGWIIQTAGGYYNITRVIACVLVLMVIMFILDAIV 240


>gi|91211416|ref|YP_541402.1| ABC transporter permease [Escherichia coli UTI89]
 gi|117624333|ref|YP_853246.1| transporter subunit membrane protein [Escherichia coli APEC O1]
 gi|218559049|ref|YP_002391962.1| transporter subunit: permease component of ABC superfamily
           [Escherichia coli S88]
 gi|237704591|ref|ZP_04535072.1| transporter subunit membrane protein [Escherichia sp. 3_2_53FAA]
 gi|91072990|gb|ABE07871.1| hypothetical ABC transporter permease protein yehY [Escherichia
           coli UTI89]
 gi|115513457|gb|ABJ01532.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli APEC O1]
 gi|218365818|emb|CAR03558.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli S88]
 gi|226900957|gb|EEH87216.1| transporter subunit membrane protein [Escherichia sp. 3_2_53FAA]
 gi|294490787|gb|ADE89543.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli IHE3034]
 gi|307626328|gb|ADN70632.1| putative transporter subunit: permease component of ABC superfamily
           protein [Escherichia coli UM146]
 gi|315285799|gb|EFU45239.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|323951925|gb|EGB47799.1| inner membrane transport system [Escherichia coli H252]
 gi|323956164|gb|EGB51916.1| inner membrane transport system [Escherichia coli H263]
          Length = 385

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLA 236

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P   +          A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 VQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|218549545|ref|YP_002383336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218357086|emb|CAQ89719.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
          Length = 385

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  L+G
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGLNG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMTVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFNDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  + G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGLNGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMTVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|160872740|ref|ZP_02062872.1| ABC transporter permease protein [Rickettsiella grylli]
 gi|159121539|gb|EDP46877.1| ABC transporter permease protein [Rickettsiella grylli]
          Length = 282

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T L +     +S+L     A      R L  +L P+L   Q +P+       V++  
Sbjct: 89  AIPTVLEIFFGFTLSVLLGISIALCMCSFRPLHTLLFPLLLASQVLPVFAIAPVLVLWLG 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      +  I        + +T +    L   P     +++    S WQ  + + 
Sbjct: 149 YGI--------MVKIMTTVFMLFFPITNNFLDGLKQTPETYLNIAKIMNSSSWQILYQIR 200

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L   + ++ +      +  E +          G+G  +  A  +  +  +   
Sbjct: 201 IPSALPHLASGIRLATAMAPLAAIIGEWVGANQ------GLGFLLLNANAQMQIDLMFAV 254

Query: 245 MLTMLGVIFLYDQLL 259
           +  +  +  L+   +
Sbjct: 255 LFVLFFLGVLFYFFI 269



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 76/234 (32%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +       W  ++    +          V     +   ++ +    T+  +     ++ +
Sbjct: 46  IPLWFIFIWTSLIRVFHLPHYLLPTPIDVLQSLIKQGSFIFFQAIPTVLEIFFGFTLSVL 105

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I + + +     + + + P        P     P++V  + Y  +   +    ++ F 
Sbjct: 106 LGISIALCMCSFRPLHTLLFPLLLASQVLPVFAIAPVLVLWLGYGIMVKIMTTVFMLFF- 164

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               I  N + G    P  +  +A   + + W+    I +P   P+  +G   A   A  
Sbjct: 165 ---PITNNFLDGLKQTPETYLNIAKIMNSSSWQILYQIRIPSALPHLASGIRLATAMAPL 221

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A+I+ E            GLG  +  +  +     +   + ++    +    F+
Sbjct: 222 AAIIGEWVG------ANQGLGFLLLNANAQMQIDLMFAVLFVLFFLGVLFYFFI 269


>gi|125975057|ref|YP_001038967.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|256003290|ref|ZP_05428282.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281418526|ref|ZP_06249545.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125715282|gb|ABN53774.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|255992981|gb|EEU03071.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|281407610|gb|EFB37869.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|316939222|gb|ADU73256.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 270

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 88/253 (34%), Gaps = 12/253 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           +R    +  + L +   V  +   FW     V  +   I+ Q    +    +      + 
Sbjct: 17  LRRVKRKKQIILITQIAVLILFFAFWELAAEVGLIDPFISSQPSRIVNTIVSLYRNGELF 76

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T    V+  ++ ++I I + I + +   +   ++P+  +L + P     P+ +  
Sbjct: 77  HHVIVTCVETVLGFVLGTLIGILIAIILWWSEFLEKVLEPYLVVLNSLPKIALGPIFIVW 136

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +          + ++ +  +    +  V+ G      D  ++  +F     +    ++LP
Sbjct: 137 IGAGPA----AIVVIAMTISVVVTILEVLNGFLGVDGDKIKLVKTFGANKVQILTKVVLP 192

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V     + G +W   IV E        +   GLG  I    +      V+  V+
Sbjct: 193 SSLPVMVNALKVSVGLSWVGVIVGEFL------VSKAGLGYLIVYGGQVFQLDLVMASVV 246

Query: 561 IMCCFVLALNRFL 573
           I+      + R +
Sbjct: 247 ILAAAAFLMYRAV 259



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 19/233 (8%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  IV+ +        L  +   T +  +   V+  L   + A +   S  L  VL P
Sbjct: 57  SQPSRIVNTIVSLYRNGELFHHVIVTCVETVLGFVLGTLIGILIAIILWWSEFLEKVLEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P +      +V+              A +    T  V      +      + 
Sbjct: 117 YLVVLNSLPKIALGPIFIVWIGAG--------PAAIVVIAMTISVVVTILEVLNGFLGVD 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  ++ ++F  +  Q    + +P S+P +V  + +S+   W  V+  E +V        
Sbjct: 169 GDKIKLVKTFGANKVQILTKVVLPSSLPVMVNALKVSVGLSWVGVIVGEFLV------SK 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            G+G  I    +   L  ++ +++ +    FL  +      + W  K  ++R 
Sbjct: 223 AGLGYLIVYGGQVFQLDLVMASVVILAAAAFLMYRA-----VAWFEKLVVKRK 270


>gi|253574854|ref|ZP_04852194.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845900|gb|EES73908.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 300

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--CITMFRVVV 392
                V  +L I W        +   + S    +   T+  V     LG    T    V+
Sbjct: 56  WGRVAVGVLLFIIWEVFTRIGWLDSYYWSSPSAIWQTTWLQVAEGGLLGDIAYTSGSTVL 115

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +  ++    +G+   +    +   +P+  +L A P     P++V  +     +     
Sbjct: 116 GFVFGTLCGALLGLSFWWSRSYAGISEPYLIILNAMPKLALAPVLVILLGIGFFSKVALA 175

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             + +  +      +  +G  +   D +++  S     W+ +  +++P   P+ ++    
Sbjct: 176 FSMTVVVSA----LSAYSGVKSVDPDMEKLMYSLGAKRWQVFTKVVIPWSMPWIISSLRI 231

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               A   +IV E  +       + G+G  I  +      
Sbjct: 232 NIALALAGAIVGEFIA------SSQGVGRMIMYAGTILDI 265



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 15/211 (7%)

Query: 23  LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   ++  +   +        + P  I     + +    L    + T+   +   V   L
Sbjct: 63  VLLFIIWEVFTRIGWLDSYYWSSPSAIWQTTWLQVAEGGLLGDIAYTSGSTVLGFVFGTL 122

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR    +  P L I+ ++P L      V+     +         + +  
Sbjct: 123 CGALLGLSFWWSRSYAGISEPYLIILNAMPKLALAPVLVILLGIGF--------FSKVAL 174

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F+  V     S Y  + ++  D+E++  S     WQ F  + +P+SMP ++ ++ ++++
Sbjct: 175 AFSMTVVVSALSAYSGVKSVDPDMEKLMYSLGAKRWQVFTKVVIPWSMPWIISSLRINIA 234

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                 +  E I          G+G  I  A
Sbjct: 235 LALAGAIVGEFIASSQ------GVGRMIMYA 259


>gi|226305723|ref|YP_002765683.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184840|dbj|BAH32944.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 264

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 8/163 (4%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +     I   + P+A +L   P     PL+     Y         +L+ +    + I+ 
Sbjct: 86  LMSQAKWIERIVYPYAVVLQVIPILAIVPLIGLWFGYG----MTARTLVCVLIAAFPIIT 141

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G  +      E+ +    + W     + L    P  +TG  TA G     +I+ ++
Sbjct: 142 NTHFGLQSVDRGLHELFTLGRASRWDRLVKLELRAAMPAILTGIRTASGLVVVGAIIGDM 201

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                      G+G  +     +    +++  ++I   F + +
Sbjct: 202 F----FAKGQPGIGTLLDVYRSRLQSEDLIAAIVIASVFGVLV 240



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 12/167 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L ++++ +  ++ P   ++Q IPIL  +    ++F      + +   L A F I T    
Sbjct: 86  LMSQAKWIERIVYPYAVVLQVIPILAIVPLIGLWFGYGMTARTLVCVLIAAFPIIT---- 141

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
               + +  L ++ R L E+    R S W +   L +  +MP ++  +  +       VV
Sbjct: 142 ----NTHFGLQSVDRGLHELFTLGRASRWDRLVKLELRAAMPAILTGIRTASGL----VV 193

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              +I         PGIG+ + +         ++ A++       L 
Sbjct: 194 VGAIIGDMFFAKGQPGIGTLLDVYRSRLQSEDLIAAIVIASVFGVLV 240


>gi|170735077|ref|YP_001774191.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169821115|gb|ACA95696.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 238

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 74/179 (41%), Gaps = 16/179 (8%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV  ++ I+  G          +           L  YA +  L ++ +M +++      
Sbjct: 8   LVGSLVAIIAVGWALARG----IGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPA 63

Query: 87  ATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
             L ++ R   +    +  + +I  +IP L  L   +  F            + AI A+F
Sbjct: 64  GVLLSRPRFQHQAERFMQ-VFNIGNTIPSLAVLAIALGIFGIGN--------VPAIVALF 114

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            + +  +T + Y+ + N+P  L E ++   ++GWQ    + +P ++P +V  +  +++ 
Sbjct: 115 LASLLPVTRNAYEGMKNVPAALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALAI 173



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 15/224 (6%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               I + W     I     +Q    + +     M  VV  + +A  + +P G+ +  RP
Sbjct: 12  LVAIIAVGWALARGIGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLL-SRP 70

Query: 413 HISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + + F Q+       P+     + +          N+   + +   +   +  N  
Sbjct: 71  RFQHQAERFMQVFNIGNTIPSLAVLAIALGIFGIG----NVPAIVALFLASLLPVTRNAY 126

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P   +E A    +TGW+    + LP   P  V G  TA       + ++     
Sbjct: 127 EGMKNVPAALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALAINVGTAPLA----- 181

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +    LG+ I       + P ++LG  +     L L+  +
Sbjct: 182 --YLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALVLDGIV 223


>gi|189467051|ref|ZP_03015836.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM
           17393]
 gi|189435315|gb|EDV04300.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM
           17393]
          Length = 394

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    A   ++  + R+  +L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLSVAIYMSEVANSRIRNLLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FIQKVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGAHYEALFLLGVVLFFISLL 381



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+IA    + V I++       I + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILIALPFGLSVAIYMSEVANSRIRNLLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFIQKVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHT 339


>gi|161503356|ref|YP_001570468.1| hypothetical protein SARI_01429 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864703|gb|ABX21326.1| hypothetical protein SARI_01429 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 244

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 47  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 106

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 107 AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 158

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 159 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 211

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 212 PTLILGATATALFALILDTLL 232



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 18  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 76

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 77  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 131

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A   A N      
Sbjct: 132 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIA--TAINVGTAPL 189

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G         G  I        FP ++LG      F L L+  L
Sbjct: 190 AFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDTLL 232


>gi|307719470|ref|YP_003875002.1| glycine betaine/L-proline ABC transporter permease [Spirochaeta
           thermophila DSM 6192]
 gi|306533195|gb|ADN02729.1| glycine betaine/L-proline ABC transporter, permease [Spirochaeta
           thermophila DSM 6192]
          Length = 375

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 20/240 (8%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + ++G++ +LL G  +      +  +           Q  +       + ++I+ L    
Sbjct: 132 LALLGMVALLLSGALD-----GLGVMREFATRRRVFLQETAAHLSLSGAGILIATLAGIP 186

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--------YPGKVIGAELA 137
              LA K+++ G V+      +Q+IP L      +     L          G        
Sbjct: 187 LGILAHKNKKAGGVVFSFTGGIQTIPSLALFGLLIAPLAALSEAVPVLRDVGISGLGNTP 246

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    +  +  +    L  + + L E +R   LS  Q+ +++ +P S+P ++  + 
Sbjct: 247 ALIALSLYALLPIVRTTAAGLSLLEKGLLEAARGMGLSPLQRLFWVEIPVSLPVILAGLR 306

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            +          + +I  G       G G +I   + +     I   +L  + +    D+
Sbjct: 307 TASVQVVGTTTVAALIGAG-------GFGRFIFQGLGQSAYDLIALGVLPTVLLSLGVDR 359



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 21/246 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
                       +  + +  A   +G +    T + V        +++      I+IA++
Sbjct: 125 TRKWGTALALLGMVALLLSGALDGLGVMREFATRRRVFLQETAAHLSLS--GAGILIATL 182

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP----------- 448
             IP+GI           +  F   +   P+   F L+++ ++                 
Sbjct: 183 AGIPLGILAHKNKKAGGVVFSFTGGIQTIPSLALFGLLIAPLAALSEAVPVLRDVGISGL 242

Query: 449 -NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            N    + +       I+    AG S       E A    ++  +   ++ +P   P  +
Sbjct: 243 GNTPALIALSLYALLPIVRTTAAGLSLLEKGLLEAARGMGLSPLQRLFWVEIPVSLPVIL 302

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       + V+ +   G       G G +I +   + ++  + LGVL      L
Sbjct: 303 AGLRTASVQVVGTTTVAALIGAG-------GFGRFIFQGLGQSAYDLIALGVLPTVLLSL 355

Query: 568 ALNRFL 573
            ++R  
Sbjct: 356 GVDRAW 361


>gi|26248508|ref|NP_754548.1| ABC transporter permease [Escherichia coli CFT073]
 gi|227887184|ref|ZP_04004989.1| transporter subunit: membrane component of ABC superfamily protein
           [Escherichia coli 83972]
 gi|300978679|ref|ZP_07174369.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301048862|ref|ZP_07195856.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|26108913|gb|AAN81116.1|AE016763_75 Hypothetical ABC transporter permease protein yehY [Escherichia
           coli CFT073]
 gi|227835534|gb|EEJ46000.1| transporter subunit: membrane component of ABC superfamily protein
           [Escherichia coli 83972]
 gi|300299317|gb|EFJ55702.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300409611|gb|EFJ93149.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|307554199|gb|ADN46974.1| putative glycine/betaine/choline ABC superfamily transport protein
           [Escherichia coli ABU 83972]
 gi|315294506|gb|EFU53854.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 385

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 TQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGTQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|167039847|ref|YP_001662832.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|300915327|ref|ZP_07132641.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307724829|ref|YP_003904580.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
 gi|166854087|gb|ABY92496.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|300888603|gb|EFK83751.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307581890|gb|ADN55289.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
          Length = 212

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A++I++        L AK       ++ + + +Q+IP L  L F V +          
Sbjct: 28  VMALIIAIAIGVPLGILIAKFPSTSSFVIGLANAVQAIPSLALLGFLVPFLGIGSTP--- 84

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                +I  I    +  +  + Y  L NI + + E  +   ++  Q    + +P ++P +
Sbjct: 85  -----SIVMIVMYTLLPIIKNTYTGLVNIDKAILEAGKGMGMTEIQLMRMVQLPLALPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++      F   + +I  G       G+G  I   I   +   IL   +  + + 
Sbjct: 140 MAGIRIAAVTAVGFTTLAALIGAG-------GLGQLIYRGISMVNNQMILAGAIPAMILA 192

Query: 253 FLYDQLLF 260
            L D +L 
Sbjct: 193 LLIDYILL 200



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ +IIA  I +P+GI I   P  SS +   A  + A P+      +V  +       + 
Sbjct: 28  VMALIIAIAIGVPLGILIAKFPSTSSFVIGLANAVQAIPSLALLGFLVPFLGIG----ST 83

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++  T   I+ N   G         E      +T  +  R + LP   P  + G 
Sbjct: 84  PSIVMIVMYTLLPIIKNTYTGLVNIDKAILEAGKGMGMTEIQLMRMVQLPLALPVIMAGI 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + ++ +   G       GLG  I       +   ++ G +      L ++
Sbjct: 144 RIAAVTAVGFTTLAALIGAG-------GLGQLIYRGISMVNNQMILAGAIPAMILALLID 196

Query: 571 RFL 573
             L
Sbjct: 197 YIL 199


>gi|220931988|ref|YP_002508896.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219993298|gb|ACL69901.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 278

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    +T+   ++  I  +++   + I + +  ++   ++P+  +L + P     P+
Sbjct: 81  GQLLNHIGVTVTENIIGFISGTLLGTLIAIILWWFEYLYDLLEPYIVILNSIPKVALGPV 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +     N    + ++ +  +    +  +I G      +  ++ S+   +  +    
Sbjct: 141 IIVWMG----NGPQAIIVMALLISVIVTIMMMINGFREVEGNLVKLLSTLGASKKQVLFK 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P   +    + G +   +IV E        +   GLG  I    +  +   V+
Sbjct: 197 VILPASIPTIFSALKVSVGLSMVGTIVGEFL------VSKAGLGYLIVYGGQVFNLHLVM 250

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++++C     +   +
Sbjct: 251 MSIILLCLIAGLMYYII 267



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 93/258 (36%), Gaps = 14/258 (5%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           +LY +    IS + F  +  +L F     + +  +      + P  I+ ++        L
Sbjct: 24  YLYGLRKRAISIKFFQILIIVLLFTTWELLSHFGVINTFLVSQPSKILSLLVKMTQNGQL 83

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             +   T    +   +   L   + A +      L  +L P + I+ SIP +      +V
Sbjct: 84  LNHIGVTVTENIIGFISGTLLGTLIAIILWWFEYLYDLLEPYIVILNSIPKVALGPVIIV 143

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  N     ++ A L ++       +             +  +L ++  +   S  Q  +
Sbjct: 144 WMGNGPQAIIVMALLISVIVTIMMMI--------NGFREVEGNLVKLLSTLGASKKQVLF 195

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P S+P +   + +S+       +  E +V         G+G  I    +  +L  +
Sbjct: 196 KVILPASIPTIFSALKVSVGLSMVGTIVGEFLV------SKAGLGYLIVYGGQVFNLHLV 249

Query: 242 LYAMLTMLGVIFLYDQLL 259
           + +++ +  +  L   ++
Sbjct: 250 MMSIILLCLIAGLMYYII 267


>gi|15832271|ref|NP_311044.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168750501|ref|ZP_02775523.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|168757703|ref|ZP_02782710.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|168764220|ref|ZP_02789227.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|168771595|ref|ZP_02796602.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|168777293|ref|ZP_02802300.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|168783699|ref|ZP_02808706.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|168788931|ref|ZP_02813938.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|168801190|ref|ZP_02826197.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|195935501|ref|ZP_03080883.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808863|ref|ZP_03251200.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208812541|ref|ZP_03253870.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|209397432|ref|YP_002271532.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|217326974|ref|ZP_03443057.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|254794023|ref|YP_003078860.1| putative ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223416|ref|ZP_05937697.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259034|ref|ZP_05951567.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283378|ref|YP_003500196.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|13362486|dbj|BAB36440.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767440|gb|EDU31284.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015312|gb|EDU53434.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|188999036|gb|EDU68022.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355364|gb|EDU73783.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|189359702|gb|EDU78121.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|189365735|gb|EDU84151.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|189371415|gb|EDU89831.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|189376603|gb|EDU95019.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|208728664|gb|EDZ78265.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208733818|gb|EDZ82505.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|209158832|gb|ACI36265.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|209766438|gb|ACI81531.1| putative transport system permease protein [Escherichia coli]
 gi|209766440|gb|ACI81532.1| putative transport system permease protein [Escherichia coli]
 gi|209766442|gb|ACI81533.1| putative transport system permease protein [Escherichia coli]
 gi|209766444|gb|ACI81534.1| putative transport system permease protein [Escherichia coli]
 gi|209766446|gb|ACI81535.1| putative transport system permease protein [Escherichia coli]
 gi|217319341|gb|EEC27766.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|226237485|dbj|BAH47007.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O55:H7]
 gi|254593423|gb|ACT72784.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290763251|gb|ADD57212.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|320192254|gb|EFW66899.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. EC1212]
 gi|320641196|gb|EFX10674.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. G5101]
 gi|320646584|gb|EFX15495.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. 493-89]
 gi|320651839|gb|EFX20214.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. H 2687]
 gi|320657563|gb|EFX25361.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663169|gb|EFX30478.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667920|gb|EFX34823.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. LSU-61]
 gi|326339472|gb|EGD63283.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. 1125]
 gi|326343934|gb|EGD67695.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli O157:H7 str. 1044]
          Length = 385

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 GLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAGLVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|305680228|ref|ZP_07403036.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
 gi|305659759|gb|EFM49258.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 220

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 12/222 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++  +++   +      I      +   +V++II S++ IP+GIW               
Sbjct: 5   ALSILMDPQRWGGDSGFIMRSEQHIVLTLVVLIIGSVLAIPLGIWCAHVRPGEVIASILM 64

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               A P+     L    +    L P L L +L+       +     +G  A      E 
Sbjct: 65  NSARALPSLGLLILFGLWLGVGVLAPTLALIVLVFPS----LFIGAYSGIMAIDAGIIES 120

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +   + W+  R I +P   P  V G   A        +++   +    +    GLG Y
Sbjct: 121 ARATGHSWWQQVRKIEIPLALPLIVGGFRQAA-------LLASSTATFVAYTSDFGLGRY 173

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           I    +   +P ++ G L++       +  ++  L       
Sbjct: 174 IFAGLKTRDYPLMLCGSLLVILITFFFD-LIFGRLQALTHNR 214



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 15/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +  +  L  ++I  +         A  R   ++   +++  +++P LG L    ++    
Sbjct: 27  QHIVLTLVVLIIGSVLAIPLGIWCAHVRPGEVIASILMNSARALPSLGLLILFGLWLGV- 85

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V+   LA I  +F S    +    Y  +  I   + E +R+   S WQ+   + +P
Sbjct: 86  ---GVLAPTLALIVLVFPS----LFIGAYSGIMAIDAGIIESARATGHSWWQQVRKIEIP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P +V     +       ++AS             G+G YI   +K +D   +L   L
Sbjct: 139 LALPLIVGGFRQA------ALLASSTATF-VAYTSDFGLGRYIFAGLKTRDYPLMLCGSL 191

Query: 247 TMLGVIFLYDQLLFR 261
            ++ + F +D +  R
Sbjct: 192 LVILITFFFDLIFGR 206


>gi|311069894|ref|YP_003974817.1| OpuCB protein [Bacillus atrophaeus 1942]
 gi|310870411|gb|ADP33886.1| OpuCB [Bacillus atrophaeus 1942]
          Length = 217

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   +           + A+++  L          + ++   +++ I++I+Q++P L
Sbjct: 8   LQTNGGEMLYKTWEHLYISIIAVILGTLVAVPLGIALTRMKKGAGLVIGIVNIIQTLPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +              ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 68  AILAFFIPLLGVG--------KVPAIVALFFYSVLPILRNTYTGILGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  ++   + +P ++P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTAGEQIRLVELPLAVPVIMAGVRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  L D LL
Sbjct: 173 NLYQPEYIIGGAVPVTILAILIDYLL 198



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  ++ +I+ +++ +P+GI +      +  +     ++   P+       +  +     
Sbjct: 23  LYISIIAVILGTLVAVPLGIALTRMKKGAGLVIGIVNIIQTLPSLAILAFFIPLLGVG-- 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +T     R + LP   P  
Sbjct: 81  --KVPAIVALFFYSVLPILRNTYTGILGVNKNLLESGKGIGMTAGEQIRLVELPLAVPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGVRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 ILIDYLL 198


>gi|204927897|ref|ZP_03219098.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323239|gb|EDZ08435.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 236

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 76/227 (33%), Gaps = 16/227 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI + 
Sbjct: 11  GFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL- 68

Query: 410 FRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            RP      +   Q+       P      L +  +            + +   +   I+ 
Sbjct: 69  SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIVR 124

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A   A N       
Sbjct: 125 NTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIA--TAINVGTAPLA 182

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G         G  I        FP ++LG      F L L+  L
Sbjct: 183 FLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|168229877|ref|ZP_02654935.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168260339|ref|ZP_02682312.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168463086|ref|ZP_02697017.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168819254|ref|ZP_02831254.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194469431|ref|ZP_03075415.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|200389373|ref|ZP_03215984.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|194455795|gb|EDX44634.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195633916|gb|EDX52268.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|199601818|gb|EDZ00364.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205335553|gb|EDZ22317.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205343760|gb|EDZ30524.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205350923|gb|EDZ37554.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|320086024|emb|CBY95798.1| Bicarbonate transport system permease protein cmpB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
          Length = 236

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A   A N      
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIA--TAINVGTAPL 181

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G         G  I        FP ++LG      F L L+  L
Sbjct: 182 AFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|118479910|ref|YP_897061.1| ABC transporter permease [Bacillus thuringiensis str. Al Hakam]
 gi|118419135|gb|ABK87554.1| ABC transporter, permease component [Bacillus thuringiensis str. Al
           Hakam]
          Length = 284

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    WL    
Sbjct: 27  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWLDGSL 86

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 87  WVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 146

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 147 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G AW   I  E+       +   GLG  I+   +  +F
Sbjct: 202 LPASFPAIISTLKVNVGLAWVGVIFGELL------VSKQGLGYLISYGFQVFNF 249



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 68  SSPSSIWDLFLNKWLDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 127

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 128 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 179

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 180 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLAWVGVIFGELLV------SK 233

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 234 QGLGYLISYGFQVFNF 249


>gi|264678201|ref|YP_003278108.1| probable ABC transporter permease [Comamonas testosteroni CNB-2]
 gi|262208714|gb|ACY32812.1| probable ABC transporter permease protein [Comamonas testosteroni
           CNB-2]
          Length = 262

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 87/257 (33%), Gaps = 17/257 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+A + +  +              P  +   +   L       +   T   +L  ++I  
Sbjct: 16  LIAVLAIWELAARQFGLSALVLPAPSAVALSLWSGLASGYFWPHLWATLQALLLGLLIGS 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               +     A+S  L  VL P + + Q +P L      V++F       V+   L   F
Sbjct: 76  AVGLLAGMALAESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFGMLPTVLITALICFF 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  +    L  +     ++ R    +  Q    L +P  +P ++  + +++
Sbjct: 136 --------PLMENTLTGLRQVDGQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAV 187

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--L 258
                  V +E +          G+G+ +  A    D   +  A++ +  +  L  Q  L
Sbjct: 188 VLALVGAVVAEFMGASQ------GLGAVVIAAQGMMDTTLMFAALVLIAAMGLLLYQACL 241

Query: 259 LFRPMIVWSNKFRLERT 275
           +    ++ S+ F   ++
Sbjct: 242 VLERYLLRSHHFSTSQS 258



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +V      +A      + + + +  +         T+  +++ ++I S + +  G+ + 
Sbjct: 34  ALVLPAPSAVALSLWSGLASGYFWPHLW-------ATLQALLLGLLIGSAVGLLAGMALA 86

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   ++P+  +    P     PL V    +      L   L+      + ++ N +
Sbjct: 87  ESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFG----MLPTVLITALICFFPLMENTL 142

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G         ++      T  +    + LP   P  + G   A   A   ++V+E    
Sbjct: 143 TGLRQVDGQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAVVLALVGAVVAEFMG- 201

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 + GLGA +  +        +   ++++    L L
Sbjct: 202 -----ASQGLGAVVIAAQGMMDTTLMFAALVLIAAMGLLL 236


>gi|22536427|ref|NP_687278.1| amino acid ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|76787109|ref|YP_328970.1| quaternary amine ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798132|ref|ZP_00780385.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|77405377|ref|ZP_00782472.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|22533255|gb|AAM99150.1|AE014202_18 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562166|gb|ABA44750.1| quaternary amine uptake (QAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586491|gb|EAO62996.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|77176055|gb|EAO78829.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 211

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+ + +        +  +  ++  +++ I  ++Q+IP L  L   +  F         
Sbjct: 24  FFAIALGIAIAVPLGVVLTRFPKVAKIIIAIASMLQTIPSLALLALMIPLFGIG------ 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             ++ AI A+F   +  +  + Y  + N+   L++ ++   +   Q  + + +P + P +
Sbjct: 78  --KIPAIVALFIYSLLPILRNTYIGMNNVNPTLKDCAKGMGMKPIQSIFQVELPLATPII 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S      +   +  I  G       G+G  I   +       IL   + ++ + 
Sbjct: 136 MAGIRLSTIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQSKLILGGTIPVIILS 188

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 189 LIIDYLL 195



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              I +   I +P+G+ +   P ++  I   A +L   P+     L++           +
Sbjct: 24  FFAIALGIAIAVPLGVVLTRFPKVAKIIIAIASMLQTIPSLALLALMIPLFGIG----KI 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G +      K+ A    +   +    + LP   P  + G 
Sbjct: 80  PAIVALFIYSLLPILRNTYIGMNNVNPTLKDCAKGMGMKPIQSIFQVELPLATPIIMAGI 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             +       + ++     G       GLG  I           ++ G + +    L ++
Sbjct: 140 RLSTIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQSKLILGGTIPVIILSLIID 192

Query: 571 RFL 573
             L
Sbjct: 193 YLL 195


>gi|268325202|emb|CBH38790.1| putative ABC-type sulfonate/taurin nitrate/bicarbonate transporter,
           permease component [uncultured archaeon]
          Length = 249

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 15/241 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           + WF +       +    I  +   F+       ++   +T +RV V  +  S +    G
Sbjct: 17  VLWFVISGYYNSPLFPGPIETVYAFFSILATQDGMYQIGVTCYRVFVGTLFGSCVGALCG 76

Query: 406 IWIGFRPHISSKIQPFAQ-LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           I   +       ++     L  + P+  +  + V       + P L ++  +I     + 
Sbjct: 77  ILPRYSKMAEYTVKSVVYPLFESIPSLCWVLIFVVWFGLSDMTPILAITAAVIP----FF 132

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + N+  G         E+A +      R  + II+P ++PY  +   T+   AW   I+ 
Sbjct: 133 IINIWEGVKELDESLIEMAHTCTRNRLRILQKIIMPMLYPYAFSAFKTSFEVAWKVVILG 192

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           EV           G+G  +  S E  +   V    L     ++  +      L+ Y  R 
Sbjct: 193 EVFG------AACGIGYMLWISYEVYAIEYVFAWTLCCAMIIIVFDYG----LFNYIDRR 242

Query: 585 L 585
            
Sbjct: 243 Y 243



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 92/251 (36%), Gaps = 16/251 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           +IF ++F + AF+++  +I+   +       P + V      L           T  R+ 
Sbjct: 4   KIFYSVFAISAFLVLWFVISG-YYNSPLFPGPIETVYAFFSILATQDGMYQIGVTCYRVF 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILD-IMQSIPILGFLTFTVVYFMNLYPGKVI 132
              +       +   L   S+     +  ++  + +SIP L ++   VV+F         
Sbjct: 63  VGTLFGSCVGALCGILPRYSKMAEYTVKSVVYPLFESIPSLCWVLIFVVWFGL------- 115

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +++  I AI  + +     ++++ +  +   L E++ +   +  +    + +P   P  
Sbjct: 116 -SDMTPILAITAAVIPFFIINIWEGVKELDESLIEMAHTCTRNRLRILQKIIMPMLYPYA 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 S    W  V+  E+           GIG  + ++ +   +  +    L    +I
Sbjct: 175 FSAFKTSFEVAWKVVILGEVFGAAC------GIGYMLWISYEVYAIEYVFAWTLCCAMII 228

Query: 253 FLYDQLLFRPM 263
            ++D  LF  +
Sbjct: 229 IVFDYGLFNYI 239


>gi|313897842|ref|ZP_07831383.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312957377|gb|EFR39004.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 249

 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 15/221 (6%)

Query: 22  LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L   +++   I I+ H        P D        +   ++  + + T   +       +
Sbjct: 14  LTCLLILWQFITIIFHIPSYYLPSPVDFFKYFIQFMQSGNMGLHITTTLYEIFIGTFWGI 73

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   +   L AK+R L  +L+P+L IMQ  P +      +++F      K        I 
Sbjct: 74  ILGMILGYLLAKNRLLEHLLMPLLLIMQISPKISIAPLFILWFGLGLTSK--------IA 125

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +     + +  +   +L  I     ++    + + WQ F  + +P +   ++    +++
Sbjct: 126 LVILVVSFPIMVAESSALKKINSGYRDLMNILQANRWQIFIRMELPCAFHEVISGSKVAV 185

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           +      V  EM+          G+G  +    +  DL  I
Sbjct: 186 TQAITSAVIGEMMGAKA------GLGYLLTNGAEMYDLNMI 220



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/208 (10%), Positives = 67/208 (32%), Gaps = 10/208 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           +  ++  +        + +      +     +      T++ + +      I+ + +G  
Sbjct: 23  FITIIFHIPSYYLPSPVDFFKYFIQFMQSGNMGLHITTTLYEIFIGTFWGIILGMILGYL 82

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     +   + P   ++   P     PL +        +       L+I    + I+  
Sbjct: 83  LAKNRLLEHLLMPLLLIMQISPKISIAPLFILWFGLGLTSK----IALVILVVSFPIMVA 138

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             +      + ++++ +      W+ +  + LP  F   ++G+  A   A  ++++ E+ 
Sbjct: 139 ESSALKKINSGYRDLMNILQANRWQIFIRMELPCAFHEVISGSKVAVTQAITSAVIGEMM 198

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEV 555
                     GLG  +    E      +
Sbjct: 199 G------AKAGLGYLLTNGAEMYDLNMI 220


>gi|332707232|ref|ZP_08427285.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
 gi|332353966|gb|EGJ33453.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
          Length = 276

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 87/236 (36%), Gaps = 5/236 (2%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +   V  ++ + W   V   +          ++     +D   +     IT+   V  
Sbjct: 22  IIAPVAVGILVLMVWDISVRVTSTPSYILPGPLLIIKVLIRDWNSLFEPLLITLKITVAA 81

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            I A++  + + + +     I   + P+A +L   P     PL++  +        +  +
Sbjct: 82  FITAAVSGLLIAMLMAQSKWIEKSLYPYAVVLQTMPIAAIAPLIIIWLRNNTFAALVICA 141

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            ++     + I+ N   G ++  ++  ++   +  + W+   Y+ LP   PY++     +
Sbjct: 142 WIV---AFFPIISNTTFGLNSIDSNLSDLFRLYKASRWQTMLYLRLPSALPYFLAALRIS 198

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            G A   ++V+E  +        +G+   +  +      P +   + ++    + +
Sbjct: 199 GGLALIGAVVAEFVAG--TGGANSGIAYQMLIAGYNLEIPRMFAALFMISSLGILI 252



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 9/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D +SL +    T    ++A + + +   + A L A+S+ +   L P   ++Q++PI    
Sbjct: 63  DWNSLFEPLLITLKITVAAFITAAVSGLLIAMLMAQSKWIEKSLYPYAVVLQTMPIAAIA 122

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++  N           A +   +    + +  +    L +I  +L ++ R ++ S 
Sbjct: 123 PLIIIWLRNN-------TFAALVICAWIVAFFPIISNTTFGLNSIDSNLSDLFRLYKASR 175

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ   YL +P ++P  +  + +S        V +E   V  T     GI   + +A    
Sbjct: 176 WQTMLYLRLPSALPYFLAALRISGGLALIGAVVAEF--VAGTGGANSGIAYQMLIAGYNL 233

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  +  A+  +  +  L   +L
Sbjct: 234 EIPRMFAALFMISSLGILIFVIL 256


>gi|197265177|ref|ZP_03165251.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197243432|gb|EDY26052.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
          Length = 236

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PMLILGATATALFALILDTLL 224



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPMLILGATATALFALILDTLL 224


>gi|315186274|gb|EFU20035.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta thermophila DSM 6578]
          Length = 375

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 75/213 (35%), Gaps = 15/213 (7%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
            +        Q  +       + ++I+ L       LA ++++ G V+  +   +Q+IP 
Sbjct: 154 ELATRRGVFLQETAAHLSLSGAGILIATLAGIPLGILAHRNKKAGGVVFSLTGGIQTIPS 213

Query: 113 LGFLTFTVVYFMNL--------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           L      +     L          G        A+ A+    +  +  +    L  + + 
Sbjct: 214 LALFGLLIAPLAALSETVPVLKDVGISALGNTPALIALSLYALLPIVRTTAAGLSLLEKG 273

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E +R   LS  Q+ +++ +P S+P ++  +  +          + +I  G       G
Sbjct: 274 LLEAARGMGLSPLQRLFWVEIPVSLPVILTGLRTASVQVVGTTTVAALIGAG-------G 326

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G +I   + +     I   +L  + +    D+
Sbjct: 327 FGRFIFQGLGQSAYDLIALGVLPTVLLSLGVDR 359



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 19/194 (9%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP--- 448
             I+IA++  IP+GI           +      +   P+   F L+++ ++         
Sbjct: 175 AGILIATLAGIPLGILAHRNKKAGGVVFSLTGGIQTIPSLALFGLLIAPLAALSETVPVL 234

Query: 449 ---------NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                    N    + +       I+    AG S       E A    ++  +   ++ +
Sbjct: 235 KDVGISALGNTPALIALSLYALLPIVRTTAAGLSLLEKGLLEAARGMGLSPLQRLFWVEI 294

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  +TG  TA       + V+ +   G       G G +I +   + ++  + LGV
Sbjct: 295 PVSLPVILTGLRTASVQVVGTTTVAALIGAG-------GFGRFIFQGLGQSAYDLIALGV 347

Query: 560 LIMCCFVLALNRFL 573
           L      L ++R  
Sbjct: 348 LPTVLLSLGVDRAW 361


>gi|320184840|gb|EFW59630.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           flexneri CDC 796-83]
          Length = 333

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 125 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 184

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 185 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 244

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 245 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 297

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 298 AIDLVLLGVIPVIVLAVLTDALF 320



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 73  DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 132

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 133 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 190

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 191 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 250

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 251 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 303

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 304 LGVIPVIVLAVLTDALF 320


>gi|301644147|ref|ZP_07244155.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|301077445|gb|EFK92251.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|170682890|ref|YP_001742994.1| quaternary amine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|170520608|gb|ACB18786.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli SMS-3-5]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +    A   +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGALNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|257881491|ref|ZP_05661144.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|258615074|ref|ZP_05712844.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecium DO]
 gi|294620888|ref|ZP_06700089.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium U0317]
 gi|314938946|ref|ZP_07846211.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943503|ref|ZP_07850270.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314948203|ref|ZP_07851597.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314951563|ref|ZP_07854609.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991575|ref|ZP_07857051.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314994908|ref|ZP_07860035.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|257817149|gb|EEV44477.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|291599499|gb|EFF30515.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium U0317]
 gi|313590890|gb|EFR69735.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593859|gb|EFR72704.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313596257|gb|EFR75102.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597875|gb|EFR76720.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313641655|gb|EFS06235.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313645336|gb|EFS09916.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 223

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 29  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 88

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 89  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 140

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  +I+ A 
Sbjct: 141 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATEGTSIILAG 193

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 194 ALPTALMAIITDWLL 208



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 23  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 83  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 139 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATEGTSIIL 191

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 192 AGALPTALMAIITDWLLGILERRL 215


>gi|161614078|ref|YP_001588043.1| hypothetical protein SPAB_01817 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161363442|gb|ABX67210.1| hypothetical protein SPAB_01817 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 236

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASILPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTTVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASILPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A   A N      
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIA--TAINVGTAPL 181

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G         G  I        FP ++LG      F L L+  L
Sbjct: 182 AFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|15802680|ref|NP_288707.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|12516435|gb|AAG57262.1|AE005444_12 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 GLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAGLVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|281179222|dbj|BAI55552.1| putative glycine/betaine/choline ABC transporter permease component
           [Escherichia coli SE15]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 VQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|295677598|ref|YP_003606122.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295437441|gb|ADG16611.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 270

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 15/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + +  R+   +V+S +   V A        +   L P + ++  +P L  L    
Sbjct: 71  LWTDTASSLRRLGIGLVVSAVIALVAAIATGSLPLVSATLSPFITVVSMVPPLAVLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   ++     IP +L   +++   + W   
Sbjct: 131 IVFGLD--------ELSKVVLIVVGITPVIIRDLHARAREIPVELWVKAQTLGATSWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P  +P L+    +S+   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRLVLPQLLPRLLVATRLSLGAAWLFLIAAEAIASTD------GLGYRIFLVRRYLSMDL 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           IL  +  +  + +L D+LL R +  W
Sbjct: 237 ILPYVAWITLLAWLTDELL-RRITQW 261



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 11/199 (5%)

Query: 378 YVIWLGCITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++W    +  R + + ++++++I +   I  G  P +S+ + PF  +++  P     P+
Sbjct: 69  YLLWTDTASSLRRLGIGLVVSAVIALVAAIATGSLPLVSATLSPFITVVSMVPPLAVLPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    I+ ++ A A   P +    A +   T W     
Sbjct: 129 LFIVFGLDELSK----VVLIVVGITPVIIRDLHARAREIPVELWVKAQTLGATSWTLILR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P  +     + G AW   I +E  +       T GLG  I       S   ++
Sbjct: 185 LVLPQLLPRLLVATRLSLGAAWLFLIAAEAIA------STDGLGYRIFLVRRYLSMDLIL 238

Query: 557 LGVLIMCCFVLALNRFLWH 575
             V  +       +  L  
Sbjct: 239 PYVAWITLLAWLTDELLRR 257


>gi|167751755|ref|ZP_02423882.1| hypothetical protein EUBSIR_02764 [Eubacterium siraeum DSM 15702]
 gi|167655563|gb|EDR99692.1| hypothetical protein EUBSIR_02764 [Eubacterium siraeum DSM 15702]
          Length = 247

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 99/257 (38%), Gaps = 18/257 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++  P +   +  +++  +I + ++       P  I   +   L       +   T L  
Sbjct: 2   KKHLPAVLTGIGLLILWQVIAMCINAAYILPSPTQIAVKI-WELREPLFTVHTPATMLVT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++IS++     A +  +   +   L P++   Q+IP+       V++       KV+
Sbjct: 61  LIGLLISVVLGVGLAVVMERFECVERALYPVIVTTQTIPVTAIAPLFVLWLGYGIWSKVL 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F         +T S++  L +  R+ EE+ R+  +SG   F+ L  P ++P  
Sbjct: 121 VAVLITFF--------PITISVHDGLKSAKRENEELLRTMGMSGTAIFFKLKFPAALPSF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG-- 250
              + M++              +G+ +    G+G +    + + D   +   ++ +    
Sbjct: 173 FSAIKMAIPLSIL------GAAMGEWLGAQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCA 226

Query: 251 -VIFLYDQLLFRPMIVW 266
            ++      + R +I W
Sbjct: 227 MLVVAVISAIERKLITW 243



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 77/244 (31%), Gaps = 13/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L I W  +   +       S   I                  TM   ++ ++I+ +
Sbjct: 10  TGIGLLILWQVIAMCINAAYILPSPTQIAVKIWELREPLFTVHTPATMLVTLIGLLISVV 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + + + +     +   + P        P     PL V  + Y          L+ +  
Sbjct: 70  LGVGLAVVMERFECVERALYPVIVTTQTIPVTAIAPLFVLWLGYG----IWSKVLVAVLI 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  +V  G  +   + +E+  +  ++G   +  +  P   P + +    A   +  
Sbjct: 126 TFFPITISVHDGLKSAKRENEELLRTMGMSGTAIFFKLKFPAALPSFFSAIKMAIPLSIL 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC---FVLALNRFLWHP 576
            + + E           +GLG +      +     V   V+++      V+A+   +   
Sbjct: 186 GAAMGEWLG------AQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCAMLVVAVISAIERK 239

Query: 577 LYLY 580
           L  +
Sbjct: 240 LITW 243


>gi|332523186|ref|ZP_08399438.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus porcinus str. Jelinkova 176]
 gi|332314450|gb|EGJ27435.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus porcinus str. Jelinkova 176]
          Length = 220

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 74/195 (37%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L     + ++ L       + A+   L   ++ I +++Q+IP L  ++  ++    
Sbjct: 26  LRHFLISAYGVFLAALLGIPLGIIIARKTHLRQFVMGIANVLQTIPSLAMISILMLGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+  DL +V++   ++  Q+ + + +
Sbjct: 86  G--------TKTVIATVFLYSLLPIISNTYTGIKNVSNDLVDVAKGMGMTKSQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVIMAGIR-------NALVVAIGITAIGAFVGGGGLGDIIVRGTNATNGGAIILAG 190

Query: 246 LTMLGVIFLYDQLLF 260
                ++ ++  ++ 
Sbjct: 191 SLPTALMAIFSDIIL 205



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  + Y  NH     +   +    I+ +     + +A+++ IP+GI I  + H+   + 
Sbjct: 6   TWNQLVYYYNHNGSYILTQFLRHFLISAY----GVFLAALLGIPLGIIIARKTHLRQFVM 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A +L   P+     +++  +          +   +   +   I+ N   G     ND 
Sbjct: 62  GIANVLQTIPSLAMISILMLGLGLGTKT----VIATVFLYSLLPIISNTYTGIKNVSNDL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +VA    +T  +    + LP      + G   A   A   + +    
Sbjct: 118 VDVAKGMGMTKSQRLFMVELPLSLSVIMAGIRNALVVAIGITAIGAFV 165


>gi|320178923|gb|EFW53886.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           boydii ATCC 9905]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIATIPLWLLYSGMLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|317491251|ref|ZP_07949687.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920798|gb|EFV42121.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 383

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 76/205 (37%), Gaps = 15/205 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q   +    +LS +  +L+       LAA+       +  +L+I+Q+IP +      +  
Sbjct: 174 QALGQHLALLLSTLSFALIIGIPLGVLAARRESWRKPMFSVLNIIQTIPSIALFGLLIAP 233

Query: 123 FMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              L        EL         A+ A+    +  +  S+   L  +P  + E +R   +
Sbjct: 234 LAGLAQAWPWLGELGISGIGVAPALIALVLYALLPLVRSVVAGLEQVPSPVIEAARGVGM 293

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P ++P ++    +         V +  + V   +I   G G+ +   + 
Sbjct: 294 TRAQILRKVELPLALPVVLSGARI-------VAVQTVGMAVIAALIGAGGFGAIVFQGLL 346

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
              L  +L  ++ ++ +    D L 
Sbjct: 347 SSALDLVLLGVIPVVVMAVTVDTLF 371



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  +  A II IP+G+    R      +     ++   P+   F L+++ ++    
Sbjct: 180 LALLLSTLSFALIIGIPLGVLAARRESWRKPMFSVLNIIQTIPSIALFGLLIAPLAGLAQ 239

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ +V+AG    P+   E A    +T  +  
Sbjct: 240 AWPWLGELGISGIGVAPALIALVLYALLPLVRSVVAGLEQVPSPVIEAARGVGMTRAQIL 299

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  ++GA          ++++ +   G       G GA + +     +   
Sbjct: 300 RKVELPLALPVVLSGARIVAVQTVGMAVIAALIGAG-------GFGAIVFQGLLSSALDL 352

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 353 VLLGVIPVVVMAVTVDTLF 371


>gi|113867599|ref|YP_726088.1| ABC-type transporter, fused periplasmic and permease components
           [Ralstonia eutropha H16]
 gi|113526375|emb|CAJ92720.1| ABC-type transporter, fused periplasmic and permease components
           [Ralstonia eutropha H16]
          Length = 493

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 27/236 (11%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
              +   PR  +       D   L   A R    +  A+  + L       LAA+ RR G
Sbjct: 275 ATHDGAEPRSRLAAALFGPDTTRL---ALRHVGLVAGAVGAATLVGVPLGMLAARRRRTG 331

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             ++ +++++Q++P L  L   +     +           A+ A+F   +  +  +    
Sbjct: 332 QAVLGVVNVLQTVPSLALLAMLIPLLGRIG-------VWPAMVALFLYALLPIVRNTATG 384

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L  +P+ + +  R+  L G Q   Y+ +P ++P L+  +             + +I VG 
Sbjct: 385 LEQVPQGMRDAGRALGLRGGQVLRYVELPLALPVLLAGVKT-----------AAIISVGT 433

Query: 218 TVIPLP----GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             I       G G  IA  +   D  A+L A      V+ L  Q  F  +  W+ +
Sbjct: 434 ATIAAFVGAGGFGERIATGLALND-TALLLAGAIPAAVLALVVQAAFETL-EWALR 487



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 80/280 (28%), Gaps = 14/280 (5%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           +  F R+     +    P               R    +      + +      D     
Sbjct: 206 RHYFPRYDAVVVYRLDVPQRFPQAWQALERLAGRVSADDMIAMNAAAEIDGQSFDAIARA 265

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVL-YVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            + G A   A        +             L    +  V   +  A+++ +P+G+   
Sbjct: 266 FLAGTAGQRATHDGAEPRSRLAAALFGPDTTRLALRHVGLVAGAVGAATLVGVPLGMLAA 325

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            R      +     +L   P+     +++  +    + P +    L        I+ N  
Sbjct: 326 RRRRTGQAVLGVVNVLQTVPSLALLAMLIPLLGRIGVWPAMVALFLY---ALLPIVRNTA 382

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P   ++   +  + G +  RY+ LP   P  + G  TA   +   + ++     
Sbjct: 383 TGLEQVPQGMRDAGRALGLRGGQVLRYVELPLALPVLLAGVKTAAIISVGTATIAAFVGA 442

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFV 566
           G       G G  IA          ++ G +   ++   V
Sbjct: 443 G-------GFGERIATGLALNDTALLLAGAIPAAVLALVV 475


>gi|333002845|gb|EGK22401.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-272]
 gi|333016849|gb|EGK36173.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-227]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|291519896|emb|CBK75117.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Butyrivibrio fibrisolvens 16/4]
          Length = 254

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 12/214 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +    I  I +      V         T  R+ + ++IA+++ I               I
Sbjct: 36  LLASPIKVITSLLGMLKVFSFWQSILFTFIRIFIGLLIANVLGIIFAAISYISTPFRELI 95

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPN 477
                ++ + P   F  LV+  +      P+  LS+ + F   + +++ N++ G ++   
Sbjct: 96  SVPVAVIKSTPVASFIILVLIWI------PSRNLSVFISFLMAFPVIYTNILQGLTSMDK 149

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E+A  F I   R  R+I +P + PYY   A  + G  + A I +E+           
Sbjct: 150 KMLEMAQVFRIPFKRRLRFIYVPEVIPYYQAAAALSNGLCFKAGIAAEIIGLPQGS---- 205

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +G  + ++    + PE+    +++    +  NR
Sbjct: 206 -IGERLYQAKIYLNTPELFAWTIVIIILSIVFNR 238



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 104/242 (42%), Gaps = 14/242 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ ++ ++++  ++ + L        P  ++  +   L V S  Q    T +R+   ++I
Sbjct: 14  LWAVILWLILWQLLAMYLDSDILLASPIKVITSLLGMLKVFSFWQSILFTFIRIFIGLLI 73

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + +   ++A ++  S     ++   + +++S P+  F+   +++         I +   +
Sbjct: 74  ANVLGIIFAAISYISTPFRELISVPVAVIKSTPVASFIILVLIW---------IPSRNLS 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F  F      +  ++ Q L ++ + + E+++ FR+   ++  ++ VP  +P       +
Sbjct: 125 VFISFLMAFPVIYTNILQGLTSMDKKMLEMAQVFRIPFKRRLRFIYVPEVIPYYQAAAAL 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S    +   +A+E+I +     P   IG  +  A    +   +    + ++ +  ++++ 
Sbjct: 185 SNGLCFKAGIAAEIIGL-----PQGSIGERLYQAKIYLNTPELFAWTIVIIILSIVFNRC 239

Query: 259 LF 260
             
Sbjct: 240 FL 241


>gi|320120628|gb|EFE28017.2| ABC transporter permease [Filifactor alocis ATCC 35896]
          Length = 257

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 77/191 (40%), Gaps = 12/191 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            ++  ++     +  ++ + + I       +   ++P    + A P   F  L +  +S 
Sbjct: 57  LLSSAKISFGFFLGIVLGMILAIVSSLNRTVRILLEPIITTVQATPVVSFIILCLIWLSS 116

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            +L+  +++S LM+      I++ NV++G    P    E+A+ F +   R  R I +  +
Sbjct: 117 KNLS--IFISFLMVI----PIIYRNVLSGIDNIPKGLLEMATVFRVDKKRLVRIIYVSEV 170

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FPY+ +    +C  AW + I +EV            +G  +  S       ++    +++
Sbjct: 171 FPYFRSACNISCALAWKSGIAAEVIGIPKYS-----IGEQLYTSKVYLLTADLFAWTIVI 225

Query: 563 CCFVLALNRFL 573
               +     +
Sbjct: 226 LLLSVIFKYLV 236



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 102/241 (42%), Gaps = 12/241 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ +++V  + + ++        P      + +        +    ++ ++     + ++
Sbjct: 13  LIFWLIVWELTSRIIGQEILLVSPVSAFQRLFVLSLELDFWKTVLLSSAKISFGFFLGIV 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A +++ +R + ++L PI+  +Q+ P++ F+   +++  +            +IF 
Sbjct: 73  LGMILAIVSSLNRTVRILLEPIITTVQATPVVSFIILCLIWLSSKN---------LSIFI 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +  +  ++   + NIP+ L E++  FR+   +    + V    P       +S +
Sbjct: 124 SFLMVIPIIYRNVLSGIDNIPKGLLEMATVFRVDKKRLVRIIYVSEVFPYFRSACNISCA 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML---GVIFLYDQL 258
             W   +A+E+I +    I      S + L   +     I+  +L+++    V+ ++D+L
Sbjct: 184 LAWKSGIAAEVIGIPKYSIGEQLYTSKVYLLTADLFAWTIVILLLSVIFKYLVLAIFDRL 243

Query: 259 L 259
           +
Sbjct: 244 V 244


>gi|154687508|ref|YP_001422669.1| binding-protein-dependent transport system inner membrane protein
           OpuCD [Bacillus amyloliquefaciens FZB42]
 gi|154353359|gb|ABS75438.1| OpuCD [Bacillus amyloliquefaciens FZB42]
          Length = 224

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   + Q   R  L  +  ++ + +         A+ R L   +  + +++Q++P L 
Sbjct: 12  SQNGAYVLQEFYRHFLMSVYGVLFAAIVGVPLGIFIARHRTLSGWVFAVTNVIQTVPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I ++F   +  +  + Y  + +I     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKFQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ A      ++ +   L+
Sbjct: 177 ATNGTAIILAGAIPTALMAVIADLV 201



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ A+I+ +P+GI+I     +S  +     ++   PA     +++  +         
Sbjct: 30  VYGVLFAAIVGVPLGIFIARHRTLSGWVFAVTNVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   I+ N   G ++  + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VILSLFLYSLLPIIRNTYTGIASIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA   A   + +      G       GLG  I   +   +   ++L   I    +  + 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDIIVRGSNATNGTAIILAGAIPTALMAVIA 198

Query: 571 RFL 573
             +
Sbjct: 199 DLV 201


>gi|170019552|ref|YP_001724506.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|169754480|gb|ACA77179.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|118592812|ref|ZP_01550201.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
 gi|118434582|gb|EAV41234.1| binding-protein-dependent transport systems inner membrane
           component [Stappia aggregata IAM 12614]
          Length = 271

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 70/245 (28%), Gaps = 10/245 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                    + +    +  L   W   V    +          V      +   ++    
Sbjct: 23  LARRARLTAVATPVLTAIGLIATWEIGVRAFGVPSYIAPSPSEVATTLVTEFPQLMRNFW 82

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+F  V+  ++ ++  + + +       +     P A  +   P     P++V      
Sbjct: 83  PTLFESVLGFVVGNVAAVLIAVAFVHSRMVERAFFPIAVFINTIPILAIAPILVLIFGAG 142

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++      +  L N++ G  +      E+A     T    +  I LP   P
Sbjct: 143 LT----AKVVIAALICFFPTLVNMVRGLQSVSPQALELARILSATKSEVFWKIRLPSSLP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +    A       +IV E            GLGA I ++T       +   V +   
Sbjct: 199 FLFSALKIAATTCVIGAIVGEWVG------ADVGLGALIIDATFNFRSALLYATVFLSSG 252

Query: 565 FVLAL 569
             + +
Sbjct: 253 LSVLM 257



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 86/239 (35%), Gaps = 19/239 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           I +   G+     P        +  +   L +    T    +   V+  +   + A    
Sbjct: 48  IGVRAFGVPSYIAPSPSEVATTLVTEFPQLMRNFWPTLFESVLGFVVGNVAAVLIAVAFV 107

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            SR +     PI   + +IPIL      V+ F      KV+ A L   F           
Sbjct: 108 HSRMVERAFFPIAVFINTIPILAIAPILVLIFGAGLTAKVVIAALICFF--------PTL 159

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +M + L ++     E++R    +  + FW + +P S+P L   + ++            
Sbjct: 160 VNMVRGLQSVSPQALELARILSATKSEVFWKIRLPSSLPFLFSALKIA------ATTCVI 213

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML----TMLGVIFLYDQLLFRPMIVW 266
             +VG+ V    G+G+ I  A       A+LYA +     +  ++F    +  R ++ W
Sbjct: 214 GAIVGEWVGADVGLGALIIDATFNFR-SALLYATVFLSSGLSVLMFAAVSIAERMIVRW 271


>gi|188494903|ref|ZP_03002173.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
 gi|256022185|ref|ZP_05436050.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia sp. 4_1_40B]
 gi|312973620|ref|ZP_07787792.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1827-70]
 gi|188490102|gb|EDU65205.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
 gi|310332215|gb|EFP99450.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 1827-70]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|331658209|ref|ZP_08359171.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli TA206]
 gi|331056457|gb|EGI28466.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli TA206]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|331647781|ref|ZP_08348873.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M605]
 gi|330911961|gb|EGH40471.1| osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli AA86]
 gi|331043505|gb|EGI15643.1| inner membrane ABC transporter permease protein YehY [Escherichia
           coli M605]
          Length = 385

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 VQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|330807507|ref|YP_004351969.1| amino acid ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375615|gb|AEA66965.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 238

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L  Y     L +L++M+ +LL         ++   +G     + + +I  ++P L  L  
Sbjct: 38  LLFYLQAHLLLVLASMLAALLVGIPAGIALSRPGMVGRAERFMQVFNIGNTVPPLAVLAI 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                 AIFA+F + +  +  + Y+ L N+   L+E +    ++  Q
Sbjct: 98  ALGILGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSG 202
             W + +P ++P +V  + ++++ 
Sbjct: 150 VLWKVELPNAVPIIVGGVRVALAI 173



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           +  V+  ++ A ++ IP GI +   G        +Q    +    P      + +  +  
Sbjct: 46  LLLVLASMLAALLVGIPAGIALSRPGMVGRAERFMQ-VFNIGNTVPPLAVLAIALGILGI 104

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                       +   +   I+ N   G        KE A    +T  +    + LP   
Sbjct: 105 GSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAV 160

Query: 504 PYYVTGAITACGG 516
           P  V G   A   
Sbjct: 161 PIIVGGVRVALAI 173


>gi|291557965|emb|CBL35082.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Eubacterium siraeum V10Sc8a]
          Length = 247

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 99/257 (38%), Gaps = 18/257 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++  P +   +  +++  +I + ++       P  I   +   L       +   T L  
Sbjct: 2   KKHLPAVLTGIGLLILWQVIAMCINAAYILPSPTQIAVKI-WELREPLFTVHTPATMLVT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++IS++     A +  +   +   L P++   Q+IP+       V++       KV+
Sbjct: 61  LIGLLISVVLGVGLAVVMERFEYVERALYPVIVTTQTIPVTAIAPLFVLWLGYGIWSKVL 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F         +T S++  L +  R+ EE+ R+  +SG   F+ L  P ++P  
Sbjct: 121 VAVLITFF--------PITISVHDGLKSAKRENEELLRTMGMSGTAIFFKLKFPAALPSF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG-- 250
              + M++              +G+ +    G+G +    + + D   +   ++ +    
Sbjct: 173 FSAIKMAIPLSIL------GAAMGEWLGAQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCA 226

Query: 251 -VIFLYDQLLFRPMIVW 266
            ++      + R +I W
Sbjct: 227 MLVVAVISAIERKLITW 243



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 78/244 (31%), Gaps = 13/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L I W  +   +       S   I                  TM   ++ ++I+ +
Sbjct: 10  TGIGLLILWQVIAMCINAAYILPSPTQIAVKIWELREPLFTVHTPATMLVTLIGLLISVV 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + + + +    ++   + P        P     PL V  + Y          L+ +  
Sbjct: 70  LGVGLAVVMERFEYVERALYPVIVTTQTIPVTAIAPLFVLWLGYG----IWSKVLVAVLI 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  +V  G  +   + +E+  +  ++G   +  +  P   P + +    A   +  
Sbjct: 126 TFFPITISVHDGLKSAKRENEELLRTMGMSGTAIFFKLKFPAALPSFFSAIKMAIPLSIL 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC---FVLALNRFLWHP 576
            + + E           +GLG +      +     V   V+++      V+A+   +   
Sbjct: 186 GAAMGEWLG------AQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCAMLVVAVISAIERK 239

Query: 577 LYLY 580
           L  +
Sbjct: 240 LITW 243


>gi|121609203|ref|YP_997010.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121553843|gb|ABM57992.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 229

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 8/202 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F + D+  +  +    +  V V I +A +  +P+GI I     ++  +   A ++   P
Sbjct: 5   DFIWSDLASIAAMTVQHIEIVGVGIGLAILTGVPLGILITGNAGLAKVVLYTAAMIMTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLW-LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++  +S            + +    Q  I+ N     +      +E A +  +
Sbjct: 65  SVALFGLMIPVLSVIGQGIGFLPTVIALFLYAQLPIVRNTYTAITNIDPALREAAKAMGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
                 R + LP   P  + G   A        +++   +    ++   GLG  I+    
Sbjct: 125 KTGERLRKVELPIALPIIMAGVRMA-------VVINVGVAAIAAYIGAGGLGKLISRGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           +    +++ G +++    +A +
Sbjct: 178 QSDPRQLIAGAILISVLAIAAD 199



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+ S+     +    +   + +++L       L   +  L  V++    ++ +IP +   
Sbjct: 10  DLASIAAMTVQHIEIVGVGIGLAILTGVPLGILITGNAGLAKVVLYTAAMIMTIPSVALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      L  + A+F      +  + Y ++ NI   L E +++  +  
Sbjct: 70  GLMIPVLSVIGQGI---GFLPTVIALFLYAQLPIVRNTYTAITNIDPALREAAKAMGMKT 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++   + +P ++P ++  + M+       VV +  +      I   G+G  I+  I + 
Sbjct: 127 GERLRKVELPIALPIIMAGVRMA-------VVINVGVAAIAAYIGAGGLGKLISRGISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           D   ++   + +  +    D  L
Sbjct: 180 DPRQLIAGAILISVLAIAADFAL 202


>gi|83815988|ref|YP_446572.1| transmembrane protein [Salinibacter ruber DSM 13855]
 gi|83757382|gb|ABC45495.1| transmembrane protein [Salinibacter ruber DSM 13855]
          Length = 507

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                 +         V  L +Y +   + +  ++ +++LF      +AAK R LG  ++
Sbjct: 291 LNQSLGLNATADADTRVERLRRYTADHLVLVGLSLGLAILFGVPLGVVAAKRRFLGPGVL 350

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ ++ +IP L  L   V               + A+ A+    +  + ++ Y  L +I
Sbjct: 351 IVVGVIYTIPALALLAMMVPPLGLG--------RVPAVTALTLYSLLPIVWTTYTGLKDI 402

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E + +  LS   K W + +P +   ++  + +++      ++      +G  +I 
Sbjct: 403 SGPLRESADALGLSAPAKLWRVELPLAGRSILAGIKIAV------IINIGAATLG-ALIG 455

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             G G  I   I+  +L  IL   +    +  
Sbjct: 456 AGGYGQPILTGIRRANLGLILEGTVPAAVLTI 487



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 11/164 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +  +P+G+    R  +   +     ++   PA     ++V  +    +     L+L  
Sbjct: 328 AILFGVPLGVVAAKRRFLGPGVLIVVGVIYTIPALALLAMMVPPLGLGRVPAVTALTLYS 387

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      I++    G        +E A +  ++       + LP      + G   A   
Sbjct: 388 LL----PIVWTTYTGLKDISGPLRESADALGLSAPAKLWRVELPLAGRSILAGIKIAVII 443

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              A+ +  +   G       G G  I     + +   ++ G +
Sbjct: 444 NIGAATLGALIGAG-------GYGQPILTGIRRANLGLILEGTV 480


>gi|158314114|ref|YP_001506622.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158109519|gb|ABW11716.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 281

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 105/269 (39%), Gaps = 20/269 (7%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITL-DVHSL 61
             P + S  +   +      + V  +++++L   +       P  +VD+  +   ++  L
Sbjct: 19  RRPFWRSVDVLGPVAMFWFMIGVWYLVSLVLLDPKRRFLLPPPHAVVDVAFLDRHNLEQL 78

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    +T   L+ + IS++     A L +++R +   + P   I+Q+IP L  +     
Sbjct: 79  LRALWLSTSVALTGLGISIVLGMALAVLMSQARWIERSVYPYAVILQTIPTLAMVPLIGF 138

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F   +  +VI   L A+F I +S ++         L ++ R + ++    R+  W    
Sbjct: 139 WFHYGFVSRVIVCVLIALFPIISSTLF--------GLQSVDRGMLDLFALHRVPRWVLLV 190

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI----ALAIKEQD 237
            L +P ++P       +S        V  +           PGIG  I    A  + EQ 
Sbjct: 191 KLRLPAALPATFSGFQVSAGLAVVGAVVGDFF----FKQGDPGIGVLIDLYRARLMTEQL 246

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           L A++ A L  + V   +  L       W
Sbjct: 247 LGAVILASLLGVAVFVFFGYLSRLVTGAW 275



 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 85/258 (32%), Gaps = 13/258 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA-----IGIAWQSIGYIVNHFTYQD 375
           G          + +     + + +   W+ V   +        +        V      +
Sbjct: 15  GRAGRRPFWRSVDVLGPVAMFWFMIGVWYLVSLVLLDPKRRFLLPPPHAVVDVAFLDRHN 74

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  ++    ++    +  + I+ ++ + + + +     I   + P+A +L   P     P
Sbjct: 75  LEQLLRALWLSTSVALTGLGISIVLGMALAVLMSQARWIERSVYPYAVILQTIPTLAMVP 134

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+     Y  ++      ++ +    + I+ + + G  +      ++ +   +  W    
Sbjct: 135 LIGFWFHYGFVS----RVIVCVLIALFPIISSTLFGLQSVDRGMLDLFALHRVPRWVLLV 190

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P   +G   + G A   ++V +            G+G  I     +    ++
Sbjct: 191 KLRLPAALPATFSGFQVSAGLAVVGAVVGDFF----FKQGDPGIGVLIDLYRARLMTEQL 246

Query: 556 VLGVLIMCCFVLALNRFL 573
           +  V++     +A+  F 
Sbjct: 247 LGAVILASLLGVAVFVFF 264


>gi|320195999|gb|EFW70623.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia
           coli WV_060327]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|294508506|ref|YP_003572565.1| transmembrane protein [Salinibacter ruber M8]
 gi|294344835|emb|CBH25613.1| transmembrane protein [Salinibacter ruber M8]
          Length = 511

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                 +         V  L +Y +   + +  ++ +++LF      +AAK R LG  ++
Sbjct: 295 LNQSLGLNATADADTRVERLRRYTADHLVLVGLSLGLAILFGVPLGVVAAKRRFLGPGVL 354

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            ++ ++ +IP L  L   V               + A+ A+    +  + ++ Y  L +I
Sbjct: 355 IVVGVIYTIPALALLAMMVPPLGLG--------RVPAVTALTLYSLLPIVWTTYTGLKDI 406

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E + +  LS   K W + +P +   ++  + +++      ++      +G  +I 
Sbjct: 407 SGPLRESADALGLSAPAKLWRVELPLAGRSILAGIKIAV------IINIGAATLG-ALIG 459

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             G G  I   I+  +L  IL   +    +  
Sbjct: 460 AGGYGQPILTGIRRANLGLILEGTVPAAVLTI 491



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 11/164 (6%)

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +  +P+G+    R  +   +     ++   PA     ++V  +    +     L+L  
Sbjct: 332 AILFGVPLGVVAAKRRFLGPGVLIVVGVIYTIPALALLAMMVPPLGLGRVPAVTALTLYS 391

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      I++    G        +E A +  ++       + LP      + G   A   
Sbjct: 392 LL----PIVWTTYTGLKDISGPLRESADALGLSAPAKLWRVELPLAGRSILAGIKIAVII 447

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              A+ +  +   G       G G  I     + +   ++ G +
Sbjct: 448 NIGAATLGALIGAG-------GYGQPILTGIRRANLGLILEGTV 484


>gi|260430584|ref|ZP_05784557.1| inner membrane ABC transporter permease protein YehY [Citreicella
           sp. SE45]
 gi|260418613|gb|EEX11870.1| inner membrane ABC transporter permease protein YehY [Citreicella
           sp. SE45]
          Length = 363

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 9/220 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            D+           +  +   R     L ++  + L  F    L  +   L   L+P+L 
Sbjct: 132 SDLSVAQEFAGRADAFWRATLRHLELALGSLGAAALIGFPLGILCHRQAALRGSLLPVLS 191

Query: 106 IMQSIPILGFLTFTV--------VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
            +Q+IP L      +         +      G        A  A+    +  +  +    
Sbjct: 192 FLQTIPSLAMFGIMIPLLSWIAATWPAAQTIGIAGIGFAPAFIALVLYSLLPVVGNTVAG 251

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVG 216
           L ++P  + E +R   ++GWQ+   + +P  +P L+  + + +       V+A  +   G
Sbjct: 252 LDSVPAPVREAARGMGMTGWQRLLRVELPLGLPVLLAGLRIVLVQNIGLAVIAGLIGGGG 311

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                  G+       I    L  +L AM+  + +  L D
Sbjct: 312 YGSFVFQGLNQTATDLILLGALPTVLLAMVAAIVMDILVD 351



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 13/193 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--- 447
           +  +  A++I  P+GI    +  +   + P    L   P+   F +++  +S+       
Sbjct: 159 LGSLGAAALIGFPLGILCHRQAALRGSLLPVLSFLQTIPSLAMFGIMIPLLSWIAATWPA 218

Query: 448 ---------PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          + ++  +   ++ N +AG  + P   +E A    +TGW+    + 
Sbjct: 219 AQTIGIAGIGFAPAFIALVLYSLLPVVGNTVAGLDSVPAPVREAARGMGMTGWQRLLRVE 278

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           LP   P  + G           A I   +   G+      GL     +    G+ P V+L
Sbjct: 279 LPLGLPVLLAGLRIVLVQNIGLAVIAGLIGGGGYGSFVFQGLNQTATDLILLGALPTVLL 338

Query: 558 GVLIMCCFVLALN 570
            ++      + ++
Sbjct: 339 AMVAAIVMDILVD 351


>gi|256017702|ref|ZP_05431567.1| binding-protein-dependent transport systems inner membrane
           component [Shigella sp. D9]
 gi|332278717|ref|ZP_08391130.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332101069|gb|EGJ04415.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|191165353|ref|ZP_03027195.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|293446481|ref|ZP_06662903.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|300821766|ref|ZP_07101911.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|309793008|ref|ZP_07687436.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331668829|ref|ZP_08369677.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331678079|ref|ZP_08378754.1| putative transport system permease protein [Escherichia coli H591]
 gi|190904516|gb|EDV64223.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|291323311|gb|EFE62739.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|300525608|gb|EFK46677.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|308123294|gb|EFO60556.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|323944947|gb|EGB41012.1| inner membrane transport system [Escherichia coli H120]
 gi|331064023|gb|EGI35934.1| putative transport system permease protein [Escherichia coli TA271]
 gi|331074539|gb|EGI45859.1| putative transport system permease protein [Escherichia coli H591]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|325000796|ref|ZP_08121908.1| ABC transporter permease protein [Pseudonocardia sp. P1]
          Length = 250

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 14/207 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + + G++   +P  +  +         L +    T    +    +SLL  +  A     
Sbjct: 22  AVAVTGVRPQVLPSPLRVVEQGWAFRSVLWENTLPTVQVTVVGFTVSLLVAWAIAVGVDF 81

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  L   L P+L   Q++P++      +++F            L  +  I     + +T 
Sbjct: 82  SPWLRRALTPLLVASQTLPVVAIAPLLIIWFGFGL--------LPKVLVIALVTFFPVTV 133

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            + +      R    + RS   S WQ+F Y+ +P +MP    ++ ++++      + +E 
Sbjct: 134 GLIEGFAATDRSATALLRSMGASRWQRFRYVRLPGAMPSFFTSLRIAITYAVTGAIFAEY 193

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +          G+G ++ L   +    
Sbjct: 194 VG------ARAGLGIFMQLQKNQFRTD 214



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 10/223 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             +L     +   L   W   V    +          V    +     +      T+   
Sbjct: 2   MRRLAPAALLVVALLAVWQAAVAVTGVRPQVLPSPLRVVEQGWAFRSVLWENTLPTVQVT 61

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV   ++ ++   + + + F P +   + P        P     PL++    +  L    
Sbjct: 62  VVGFTVSLLVAWAIAVGVDFSPWLRRALTPLLVASQTLPVVAIAPLLIIWFGFGLL---- 117

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++   T + +   +I G +A       +  S   + W+ +RY+ LPG  P + T  
Sbjct: 118 PKVLVIALVTFFPVTVGLIEGFAATDRSATALLRSMGASRWQRFRYVRLPGAMPSFFTSL 177

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             A   A   +I +E            GLG ++     +    
Sbjct: 178 RIAITYAVTGAIFAEYVG------ARAGLGIFMQLQKNQFRTD 214


>gi|218690278|ref|YP_002398490.1| putative ABC transporter permease [Escherichia coli ED1a]
 gi|218427842|emb|CAR08755.2| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli ED1a]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 122 YFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P     G        A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|157364206|ref|YP_001470973.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga lettingae TMO]
 gi|157314810|gb|ABV33909.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga lettingae TMO]
          Length = 250

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 96/245 (39%), Gaps = 18/245 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           ++       +      +   S+ +      +++++ +I  G +      T ++  + + +
Sbjct: 11  LIGFILLIFIWQAVSFLFKSSLVFPAPADVFEEIIELIKSGKLFIQLLQTFYKAFLGLFL 70

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A +I +  G ++G    +   ++P   +L + P   +   V+               + +
Sbjct: 71  ALLIGLITGFFVGIFQALFELLRPVLMVLRSVPVVSWLSTVILLWGIG-----WKGVVFI 125

Query: 457 IFGTQWYI-LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +F T   + +FNV  G  +      E+A  +++   + ++YI    + P+ ++    + G
Sbjct: 126 VFMTLLPVVIFNVAEGVRSVDIKLIEMAKVYNVPRPKMFKYIYAGSVLPFLLSAINISIG 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             W A+IVSE        +  +GLG  I ++      P+V    +    F L L    ++
Sbjct: 186 TMWKAAIVSEYL------IGDSGLGLQIFQAKFYVDTPKVFAHTVSAIFFGLLLEIIFYN 239

Query: 576 PLYLY 580
               +
Sbjct: 240 IWERF 244



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 100/248 (40%), Gaps = 14/248 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +   +  + +   ++ L         P D+ + +   +    L     +T  +    + +
Sbjct: 11  LIGFILLIFIWQAVSFLFKSSLVFPAPADVFEEIIELIKSGKLFIQLLQTFYKAFLGLFL 70

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +LL   +        + L  +L P+L +++S+P++ +L+  ++ +   + G         
Sbjct: 71  ALLIGLITGFFVGIFQALFELLRPVLMVLRSVPVVSWLSTVILLWGIGWKG--------V 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F +F + +  + F++ + + ++   L E+++ + +   + F Y+     +P L+  + +
Sbjct: 123 VFIVFMTLLPVVIFNVAEGVRSVDIKLIEMAKVYNVPRPKMFKYIYAGSVLPFLLSAINI 182

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+   W   + SE +      I   G+G  I  A    D   +    ++ +    L + +
Sbjct: 183 SIGTMWKAAIVSEYL------IGDSGLGLQIFQAKFYVDTPKVFAHTVSAIFFGLLLEII 236

Query: 259 LFRPMIVW 266
            +     +
Sbjct: 237 FYNIWERF 244


>gi|1657789|gb|AAB58888.1| putative ABC transporter subunit B [Methylobacterium extorquens
           AM1]
          Length = 245

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P  +   +       SL      T  R+  + VI++    +      +SR    +
Sbjct: 27  RTLPAPSAVFAFMLREAQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRL 86

Query: 100 LV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           L  P+L ++ + P L       V+            E AAI A+  +++ N+   M +  
Sbjct: 87  LDTPLLVVLNT-PALVITVLAYVWLGL--------TETAAIVAVALNKLPNVAVIMREGA 137

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   LEE++ ++R        ++ +P   P +V      +S  W  V+  E++     
Sbjct: 138 RGLDPGLEEMATTYRFDRRTWIAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG---- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                G    I       D+ A++   L  + V+   D LL +P+     ++R
Sbjct: 194 -RTQTGSAFAINYYFTLFDVTAVIGYSLVFMSVMLALDSLLLQPLDAHVRRWR 245



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 9/210 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                + +   +T+ RV V  +IA  + + +GI +G        +     ++   PA V 
Sbjct: 43  AQSGSLFFNVGVTLARVAVSFVIAMSLGVLLGIALGRSRLADRLLDTPLLVVLNTPALVI 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L    +            + +       +   +  GA       +E+A+++      W
Sbjct: 103 TVLAYVWLGLTET----AAIVAVALNKLPNVAVIMREGARGLDPGLEEMATTYRFDRRTW 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             +++LP + P+ V  A +    AW   +V E+          TG    I          
Sbjct: 159 IAHVLLPQLQPFMVAAARSGISLAWKIVLVVELLG-----RTQTGSAFAINYYFTLFDVT 213

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            V+   L+    +LAL+  L  PL  +  R
Sbjct: 214 AVIGYSLVFMSVMLALDSLLLQPLDAHVRR 243


>gi|258406416|ref|YP_003199158.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257798643|gb|ACV69580.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 250

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 19/261 (7%)

Query: 11  ISRRIFPNIFDLLAF--VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           + RR    ++ L     +LV   I + +  +    +P        +      L  +A  T
Sbjct: 1   MRRRFLNCLWPLAVLAGLLVFWEIGVAVWDMPHYILPPPSRIAQALLAHWPRLVPHALTT 60

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              ++    ++L    +     A SR L   L+P++   Q+IP+       V++F     
Sbjct: 61  CSEIVLGFGVALAAGLLLGAGIAGSRILERALLPLVIGSQTIPVFAIAPLLVLWFGYGIG 120

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            KV+ A L   F         +T S  Q L    RDL ++ R      W+ FW + VP +
Sbjct: 121 SKVVMAALIVFF--------PITVSTVQGLKAADRDLLDLLRVLEAGRWRIFWTVRVPQA 172

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--L 246
           +P +     + M+      V+    V+G+ V    G+G Y+  A  +  +  +  A+  L
Sbjct: 173 LPHIFAGAKIGMA------VSVIGAVIGEWVGARQGLGYYMVQANAQMQVDRVFAAIVLL 226

Query: 247 TMLGVIF-LYDQLLFRPMIVW 266
           +M+GV       L+ R +  W
Sbjct: 227 SMIGVGLYALVVLVERWLTPW 247



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 77/238 (32%), Gaps = 16/238 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWLGCITMFRVVVLII 395
           + L +    +V        W    YI+   +            ++     T   +V+   
Sbjct: 10  WPLAVLAGLLVFWEIGVAVWDMPHYILPPPSRIAQALLAHWPRLVPHALTTCSEIVLGFG 69

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +A    + +G  I     +   + P        P     PL+V    Y   +  +  +L+
Sbjct: 70  VALAAGLLLGAGIAGSRILERALLPLVIGSQTIPVFAIAPLLVLWFGYGIGSKVVMAALI 129

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + F     I  + + G  A   D  ++        WR +  + +P   P+   GA     
Sbjct: 130 VFF----PITVSTVQGLKAADRDLLDLLRVLEAGRWRIFWTVRVPQALPHIFAGAKIGMA 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   +++ E            GLG Y+ ++  +     V   ++++    + L   +
Sbjct: 186 VSVIGAVIGEWVGARQ------GLGYYMVQANAQMQVDRVFAAIVLLSMIGVGLYALV 237


>gi|218130137|ref|ZP_03458941.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697]
 gi|317476630|ref|ZP_07935875.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|217987641|gb|EEC53969.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697]
 gi|316907226|gb|EFV28935.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 395

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    A   ++  + ++  ++ PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLAVAVYMSEVANHKIRNLMKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FLQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGAHYEALFLLGVVLFFISLL 381



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 395 IIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           + A +I +P G+ +           I + ++P  +LL+  P+ V+         P +   
Sbjct: 183 LFAILIALPFGLAVAVYMSEVANHKIRNLMKPIIELLSGIPSVVYGFFGLIVIVPFLQKV 242

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    L  S+++       I+          P   +E + +   + W+    +++P
Sbjct: 243 FDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIP 302

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +G +   G A   ++   + +     +  T
Sbjct: 303 YSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|295840378|ref|ZP_06827311.1| ABC transporter, permease [Streptomyces sp. SPB74]
 gi|197698992|gb|EDY45925.1| ABC transporter, permease [Streptomyces sp. SPB74]
          Length = 292

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  ++  +I  +  + +GI +G    +S  + P+ ++L A P  V  P+ +       
Sbjct: 96  TLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPIFLIWFGLGP 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    A     +  R    +++P    +
Sbjct: 156 ASKIASAVVLVFFPVF----FNAFQGAREVDRNLVAHARVLGASNRRVTFQVVIPSATSW 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             T    + G A   +IV E          T GLG  ++ S    +   V   ++I
Sbjct: 212 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNAAGVYAAMVI 261



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +    T    L   VI ++   V      + R L  VL P + ++ ++P +     
Sbjct: 87  GSLWEQVWYTLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPI 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+  A +   F +         F+ +Q    + R+L   +R    S  +
Sbjct: 147 FLIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVAHARVLGASNRR 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +   +  ++ +S        +  E I          G+G  ++ +    + 
Sbjct: 199 VTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNA 252

Query: 239 LAILYAMLT 247
             +  AM+ 
Sbjct: 253 AGVYAAMVI 261


>gi|163745316|ref|ZP_02152676.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161382134|gb|EDQ06543.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 270

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  V+  I+ +I  + + +       +     P A  +   P     P++V       
Sbjct: 83  TLYESVLGFIVGNIAAVLIAVAFVHSRTVERAFFPIAVFVNTIPILAIAPILVLIFGPGL 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   ++      +  L N++ G  A      E+A     +    +  I LP   P+
Sbjct: 143 T----AKVVIAALICFFPTLVNMVRGLQAVSPQALELARILSASKSEVFWKIRLPSSLPF 198

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +    A   +   +IV E            GLGA I ++T   + P +   V +    
Sbjct: 199 LFSALKIAATTSVIGAIVGEWVG------ADMGLGALIIDATFNFNSPLLYATVFMSSGL 252

Query: 566 VLAL 569
            + +
Sbjct: 253 SVLM 256



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 17/251 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                A ++++  I + L  +     P        +      L      T    +   ++
Sbjct: 34  PLGTAASLILLWQIGVRLFAVPTYIAPAPTDVAFTLVDKFPILLANFWPTLYESVLGFIV 93

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             +   + A     SR +     PI   + +IPIL      V+ F      KV+ A L  
Sbjct: 94  GNIAAVLIAVAFVHSRTVERAFFPIAVFVNTIPILAIAPILVLIFGPGLTAKVVIAALIC 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F            +M + L  +     E++R    S  + FW + +P S+P L   + +
Sbjct: 154 FF--------PTLVNMVRGLQAVSPQALELARILSASKSEVFWKIRLPSSLPFLFSALKI 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLY 255
           +         +    +VG+ V    G+G+ I  A    +   +   +     +  ++F  
Sbjct: 206 A------ATTSVIGAIVGEWVGADMGLGALIIDATFNFNSPLLYATVFMSSGLSVLMFAT 259

Query: 256 DQLLFRPMIVW 266
             ++ R ++ W
Sbjct: 260 VSIVERLVVRW 270


>gi|196250496|ref|ZP_03149187.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
 gi|196209986|gb|EDY04754.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. G11MC16]
          Length = 209

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 15/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L    AM I++        +  + R+L   ++ I  I+Q+IP L  L F +  F     
Sbjct: 22  VLLSAIAMGIAIAVAVPLGVVLTRYRKLAEPIISIAAIIQTIPSLALLGFMLPIFGIG-- 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S
Sbjct: 80  ------KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLS 133

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +        V +  +    T I   G+G  I   ++  D   IL   +  
Sbjct: 134 LPVIMAGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILAGAIPA 186

Query: 249 LGVIFLYDQLL 259
             +  ++D LL
Sbjct: 187 AILAIVFDWLL 197



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA  + +P+G+ +     ++  I   A ++   P+      ++       L   +
Sbjct: 26  AIAMGIAIAVAVPLGVVLTRYRKLAEPIISIAAIIQTIPSLALLGFMLPIFGIGKLPAII 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  +      IL N   G         +      +T  +    + LP   P  + G 
Sbjct: 86  ALTLYALL----PILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++     G       GLG  I           ++ G +      +  +
Sbjct: 142 RTATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILAGAIPAAILAIVFD 194

Query: 571 RFLWH 575
             L  
Sbjct: 195 WLLRK 199


>gi|126667654|ref|ZP_01738623.1| Probable inner-membrane permease [Marinobacter sp. ELB17]
 gi|126627923|gb|EAZ98551.1| Probable inner-membrane permease [Marinobacter sp. ELB17]
          Length = 209

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 10/204 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L Q        ++ A+ ++ L          ++ R+  V++    I+ +IP +   
Sbjct: 3   NLSLLAQLTLEHIALVVVAVGLACLMGVPIGIAITQNERIARVVLYTASIIITIPSIALF 62

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +     +  G      + A+ A+       +  + Y ++ N+   L E +R   ++ 
Sbjct: 63  GIMIPVLSVIGHGI---GYVPAVIAVLLYSQLPIIRNTYTAINNVSPGLREAARGIGMTS 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+   + +P S+P ++  +  ++      +  +  I  G       G+G  I+  I + 
Sbjct: 120 MQRLRLVEIPLSVPIIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVLISRGISQS 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
           D   ++   + +  +  + D LL 
Sbjct: 173 DPRQLIVGAIAVSLLAIVADTLLL 196



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 8/201 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++  +  L    +  VVV + +A ++ +P+GI I     I+  +   A ++   P+   
Sbjct: 2   SNLSLLAQLTLEHIALVVVAVGLACLMGVPIGIAITQNERIARVVLYTASIIITIPSIAL 61

Query: 434 FPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F +++  +S   H    +   + ++  +Q  I+ N     +      +E A    +T  +
Sbjct: 62  FGIMIPVLSVIGHGIGYVPAVIAVLLYSQLPIIRNTYTAINNVSPGLREAARGIGMTSMQ 121

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R + +P   P  + G  TA         ++     G       GLG  I+    +   
Sbjct: 122 RLRLVEIPLSVPIIMAGVRTAVVMNIGVMAIAAYIGAG-------GLGVLISRGISQSDP 174

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            ++++G + +    +  +  L
Sbjct: 175 RQLIVGAIAVSLLAIVADTLL 195


>gi|319779446|ref|YP_004130359.1| hypothetical protein TEQUI_1296 [Taylorella equigenitalis MCE9]
 gi|317109470|gb|ADU92216.1| hypothetical protein TEQUI_1296 [Taylorella equigenitalis MCE9]
          Length = 265

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 25/260 (9%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGC----- 384
           +     R+S +L   W        I +    WQ     +      + L V          
Sbjct: 7   RPIKRGRLSEILFFLWSAFSSAAIIALFCALWQIASIALGDLVLPEPLSVFREAIEIVKN 66

Query: 385 -------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                  IT+FR ++ I  +  I + +G+  G    I+   +P   +L   P  ++  L 
Sbjct: 67  YSVHDVHITIFRSIIGITASIFIGMTLGLIAGSYKTIAIMFKPVISILLGMPPIIWVVLA 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +        +      + +I  T      + + G     N+ KE+   + I  +R  + +
Sbjct: 127 LFWFGLGSTSTIFTTIVTVIPLTF----ASAMRGMMTLDNNLKEMFQVYKIPCYRTIKNL 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P +  + +     A G     +I++E+           G+GA IA +        V+ 
Sbjct: 183 YIPHLLNFVLPAITVAVGMGIKITIMAELLG------ANQGIGAQIASARAMLETQTVLA 236

Query: 558 GVLIMCCFVLALNRFLWHPL 577
            V+++   +  +   +  PL
Sbjct: 237 FVILILAMIFIIEYLIVEPL 256



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 96/242 (39%), Gaps = 15/242 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A    +  I  +  G      P  +     I +  +        T  R +  +  S+ 
Sbjct: 30  IIALFCALWQIASIALGDLVLPEPLSVFR-EAIEIVKNYSVHDVHITIFRSIIGITASIF 88

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +A   + + ++  P++ I+  +P + ++   + +F             + IF 
Sbjct: 89  IGMTLGLIAGSYKTIAIMFKPVISILLGMPPIIWVVLALFWFGLG--------STSTIFT 140

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              + +     S  + +  +  +L+E+ + +++  ++    L +P  +  ++  + +++ 
Sbjct: 141 TIVTVIPLTFASAMRGMMTLDNNLKEMFQVYKIPCYRTIKNLYIPHLLNFVLPAITVAVG 200

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G    + +E++          GIG+ IA A    +   +L  ++ +L +IF+ + L+  
Sbjct: 201 MGIKITIMAELLGANQ------GIGAQIASARAMLETQTVLAFVILILAMIFIIEYLIVE 254

Query: 262 PM 263
           P+
Sbjct: 255 PL 256


>gi|86358894|ref|YP_470786.1| nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli
           CFN 42]
 gi|86282996|gb|ABC92059.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 309

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +         ++       SL  ++  T    L      +L   + A L   +R
Sbjct: 63  ILPAPHQVAQNIYENTVLRSLSSSRSLVYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNR 122

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL-----------AAIFAIF 143
            +   L+P L   Q+IPIL      V+   N+  G    A L           +      
Sbjct: 123 AMDRSLMPWLVASQTIPILAIAPMIVIISYNVLTGDNALAHLLNLDSDASRLVSKALIST 182

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + +   M + L +      ++ R++  S  Q FW L VP S+P L  +M ++++  
Sbjct: 183 YLSFFPVAVGMVKGLRSPEILYLDLMRTYNASPMQTFWKLRVPASIPFLFTSMKVAIAAS 242

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               +  E+         + GIGS +         + I  A++    +  +   ++
Sbjct: 243 LVGAIVGEL-----PTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGVLVAIV 293



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 66/200 (33%), Gaps = 20/200 (10%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++      ++ I + + I     +   + P+       P     P++V      
Sbjct: 95  VTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNV 154

Query: 445 HLNPNLWL---------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
               N                  +L+  + + + +   ++ G  +    + ++  +++ +
Sbjct: 155 LTGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEILYLDLMRTYNAS 214

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             + +  + +P   P+  T    A   +   +IV E+ +         G+G+ +   +  
Sbjct: 215 PMQTFWKLRVPASIPFLFTSMKVAIAASLVGAIVGELPTGA-----VAGIGSKLLAGSYY 269

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
               ++   ++        L
Sbjct: 270 SQTIDIWAALVAGSLLAGVL 289


>gi|293415414|ref|ZP_06658057.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|307138788|ref|ZP_07498144.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli H736]
 gi|331642753|ref|ZP_08343888.1| putative transport system permease protein [Escherichia coli H736]
 gi|291433062|gb|EFF06041.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|315615368|gb|EFU96000.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 3431]
 gi|331039551|gb|EGI11771.1| putative transport system permease protein [Escherichia coli H736]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|160943035|ref|ZP_02090273.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445729|gb|EDP22732.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii
           M21/2]
          Length = 256

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 81/210 (38%), Gaps = 9/210 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ F  +  +  ++ V     + +        P   +  +   L      Q    ++ R
Sbjct: 4   NKQFFRRLLAVAFWLAVWQAAAMAIGQEVFLVSPVQALRTLVQLLPRADFWQRVGFSSGR 63

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   V+  + + V A  AA+      +L P++ ++++ P+  F+   +V+         
Sbjct: 64  ILLGFVLGAVVSVVLAVCAARWSAADALLAPVMQLVKATPVASFIILALVWVRG------ 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 ++   F   +  +  ++   +      L E++  FRL   ++   + +P  +P 
Sbjct: 118 ---SALSVLISFLMVLPVLYGAVRTGIAGADVQLLEMAAVFRLPPGRRLRSIWLPAVLPA 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                 +++   W   VA+E+I + +  I 
Sbjct: 175 FRQGCSVALGICWKSGVAAEVIGLPNGSIG 204



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 87/240 (36%), Gaps = 23/240 (9%)

Query: 343 MLDIFWFCVVCGVAIGIA--------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
           +   FW  V    A+ I          Q++  +V      D    +     +  R+++  
Sbjct: 12  LAVAFWLAVWQAAAMAIGQEVFLVSPVQALRTLVQLLPRADFWQRVG---FSSGRILLGF 68

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++ +++ + + +         + + P  QL+ A P   F  L +  V    L+  + +S 
Sbjct: 69  VLGAVVSVVLAVCAARWSAADALLAPVMQLVKATPVASFIILALVWVRGSALS--VLISF 126

Query: 455 LMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LM+      +L+  V  G +       E+A+ F +   R  R I LP + P +  G   A
Sbjct: 127 LMVL----PVLYGAVRTGIAGADVQLLEMAAVFRLPPGRRLRSIWLPAVLPAFRQGCSVA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G  W + + +EV    +       +G  +  +    S  E+     ++        +  
Sbjct: 183 LGICWKSGVAAEVIGLPNGS-----IGDALYRAKITLSTGELFAWTFVIILLSAGFEKLF 237


>gi|306814754|ref|ZP_07448916.1| ABC transporter permease [Escherichia coli NC101]
 gi|305852148|gb|EFM52600.1| ABC transporter permease [Escherichia coli NC101]
 gi|324006496|gb|EGB75715.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|301155785|emb|CBW15253.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 245

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 99/241 (41%), Gaps = 15/241 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +   +F  +  + +  +I +          P      + +T     L Q+   T + +  
Sbjct: 5   LLKPLFVGIILLCLWQLIGVFGD-FPHYIFPSPQAVWLQLTSHSELLWQHTLITLIEIGL 63

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +++  LF    A L + S ++  +L+P+L I Q+IP+       V++     P K++ A
Sbjct: 64  GLLLGFLFGLSSALLLSFSPKISSLLLPVLVISQAIPVFAIAPILVLWLGYGMPSKIVMA 123

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F +  +         Y  L N P+   +++++F+ S W+    + +P ++P    
Sbjct: 124 ILIIYFPVTAAC--------YDGLRNTPKAWIDLAKTFKPSPWRLLLKVRLPAALPAFAS 175

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              +++S      VA    V+G+ V    G+G  +  A     +  +  A+L ++ +   
Sbjct: 176 GFRIAVS------VAPIGAVIGEWVGSSEGLGYLMIHANARMQVDLMFAALLILVAISLC 229

Query: 255 Y 255
            
Sbjct: 230 L 230



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 18/172 (10%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P ISS + P   +  A P     P++V  + Y   +  +   L++ F     +      G
Sbjct: 83  PKISSLLLPVLVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYF----PVTAACYDG 138

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P  + ++A +F  + WR    + LP   P + +G   A   A   +++ E      
Sbjct: 139 LRNTPKAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVSVAPIGAVIGEWVG--- 195

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLWH 575
               + GLG  +  +  +     +   +LI+    L         L RF+WH
Sbjct: 196 ---SSEGLGYLMIHANARMQVDLMFAALLILVAISLCLYFSIDWLLRRFIWH 244


>gi|222151130|ref|YP_002560284.1| hypothetical protein MCCL_0881 [Macrococcus caseolyticus JCSC5402]
 gi|222120253|dbj|BAH17588.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 245

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 98/249 (39%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  ++  LLH +   T+P           D  +   +   T L ++  ++ S+L
Sbjct: 11  FIILLCIWEVLVRLLH-VDAYTLPAPSAIFKSFFNDFSTYHVHLYPTLLLVVLGIICSIL 69

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A +      L   + P+L + Q++P++      V++F      K+I   L   F 
Sbjct: 70  CGICVAIILRLIPGLHEYIYPLLIMSQNVPVIVIAPLLVIWFGFGILPKLIVITLVCFF- 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +T S+ +      ++LE+  +    +  ++F  L  P SM      + ++ +
Sbjct: 129 -------PITVSLLEGFNETDKELEKYMKMMGATRLERFKKLEWPNSMTYFFNGLKIAGT 181

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG---VIFLYDQL 258
                 + SE +          G+G ++ +A +   +  +  A++ ++    VI+    +
Sbjct: 182 YSVMGAIISEWLG------SDKGLGKFMLIAQRAFQVDQVFVAIVWIIIFAMVIYFVIYI 235

Query: 259 LFRPMIVWS 267
           + R ++ W 
Sbjct: 236 IQRIVLRWQ 244



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  VV+ II + +  I V I +   P +   I P   +    P  V  PL+V    +  
Sbjct: 56  TLLLVVLGIICSILCGICVAIILRLIPGLHEYIYPLLIMSQNVPVIVIAPLLVIWFGFG- 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L   +++     + I  +++ G +    + ++       T    ++ +  P    Y
Sbjct: 115 ---ILPKLIVITLVCFFPITVSLLEGFNETDKELEKYMKMMGATRLERFKKLEWPNSMTY 171

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G   A   +   +I+SE            GLG ++  +       +V + ++ +  F
Sbjct: 172 FFNGLKIAGTYSVMGAIISEWLGSDK------GLGKFMLIAQRAFQVDQVFVAIVWIIIF 225

Query: 566 VLAL 569
            + +
Sbjct: 226 AMVI 229


>gi|194431453|ref|ZP_03063745.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|194420278|gb|EDX36355.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|332092646|gb|EGI97717.1| inner membrane ABC transporter permease protein yehY [Shigella
           dysenteriae 155-74]
          Length = 385

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGMLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|317401712|gb|EFV82333.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 284

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+  +   T    L  +V+ +   F+     ++SR L  V  P +    S+P + F+ 
Sbjct: 81  PRSVWPHLWLTLQATLVGLVVGVGSGFLVGMTLSRSRFLADVFNPFIVAFNSMPRIAFVP 140

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   S  
Sbjct: 141 LITMFFGLGLASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGGSPR 192

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P +       +  ++S     VV +E +          G+G  +  A+   +
Sbjct: 193 QILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALATLN 246

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
              +  A+  +  V          L R ++ W+ +FR
Sbjct: 247 ATDMFAAVTLLSIVGIALVYCVTWLERRLLHWAPEFR 283



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 13/181 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VG+ +     ++    PF     + P   F PL+         +  +    ++ F     
Sbjct: 109 VGMTLSRSRFLADVFNPFIVAFNSMPRIAFVPLITMFFGLGLASKVVTSWFVVFFLVF-- 166

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
             FN   G  +   +  +   +   +  +    + +P    +       A   A    ++
Sbjct: 167 --FNTYKGGRSVERELVDFCRTLGGSPRQILWRVRIPTAAAWTFAALPNAISFALIGVVL 224

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL-W--HPLYLY 580
           +E          TTG+G  +  +    +  ++   V ++    +AL   + W    L  +
Sbjct: 225 AEFVG------STTGMGYLMITALATLNATDMFAAVTLLSIVGIALVYCVTWLERRLLHW 278

Query: 581 G 581
            
Sbjct: 279 A 279


>gi|110806109|ref|YP_689629.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110615657|gb|ABF04324.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|30063577|ref|NP_837748.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56480048|ref|NP_708031.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30041830|gb|AAP17557.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56383599|gb|AAN43738.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|281601588|gb|ADA74572.1| putative transport system permease protein [Shigella flexneri
           2002017]
 gi|313651233|gb|EFS15631.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri 2a str. 2457T]
 gi|332755748|gb|EGJ86109.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-671]
 gi|332756384|gb|EGJ86735.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri 2747-71]
 gi|332765938|gb|EGJ96148.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
 gi|333016700|gb|EGK36029.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-304]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 93/272 (34%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +       +      +   ++ ++    ++L +    +   +        +  +  +   
Sbjct: 110 RGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANR 169

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QDV        +T+      ++ A +I +P+GIW  F       I     ++   P+   
Sbjct: 170 QDVFDDALAQHLTLL--FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVAL 227

Query: 434 FPLVVSCVSYYHLNPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + ++      ++  V+ G +  P D  E
Sbjct: 228 FGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLE 287

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  ++G + + ++ LP   P ++             ++++ +   G       G GA
Sbjct: 288 SARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGA 340

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    +  +   
Sbjct: 341 LVFQGLLSSAIDLVLLGVIPVIVLAVLTDALF 372


>gi|288905349|ref|YP_003430571.1| phosphate ABC transporter permease [Streptococcus gallolyticus
           UCN34]
 gi|288732075|emb|CBI13640.1| Putative phosphate ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
          Length = 305

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 31/268 (11%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMV 77
             ++V  +  IL+   Q+      +  + P+T       D  S    A    L      +
Sbjct: 31  LVLIVFIVAMILIFVAQKGLSTFFVDGVNPLTFLFGSKWDPSSGSFGALPMILGSFIVTI 90

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           +S L     A  AA        +    +L P ++++  IP + +    L   V +  +++
Sbjct: 91  LSALIATPIAIGAAVFMTEVSPKYGAKILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIF 150

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  
Sbjct: 151 GGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYKEASLAMGATRWQTIWRVILNA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAI 233
           + PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   +
Sbjct: 210 ARPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPTSLTTSAATLTSVLTMGIGNTVMGTV 269

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   L ++   +L M     +  + + R
Sbjct: 270 QNNVLWSLALVLLIMSLGFNMLVKFITR 297



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 77/231 (33%), Gaps = 25/231 (10%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI--GFRPHIS 415
           G+   +  +             + +   +    ++  +IA+ I I   +++      + +
Sbjct: 57  GVNPLTFLFGSKWDPSSGSFGALPMILGSFIVTILSALIATPIAIGAAVFMTEVSPKYGA 116

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             +QP  +LL   P+ V+         P V S            + +L +      + F 
Sbjct: 117 KILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFM 175

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +    A P  +KE + +   T W+    +IL    P   T  I     A+  ++  ++ 
Sbjct: 176 TVDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMV 235

Query: 528 SWGHIHLRTT--------------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 + T+              G+G  +  + +      + L +LIM  
Sbjct: 236 VGNSAVVPTSLTTSAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|271498636|ref|YP_003331661.1| binding-protein-dependent transporter inner membrane component
           [Dickeya dadantii Ech586]
 gi|270342191|gb|ACZ74956.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech586]
          Length = 270

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 89/234 (38%), Gaps = 15/234 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFV 85
           L +   + LL G+         +   P       L     + + LR+L+ + +S +   V
Sbjct: 37  LAVNAADKLLPGLGAMAQAMHRMAFEPNERTGEYLLWVDTAASLLRLLTGVGLSAVLALV 96

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           +  L      +   L P++ +   IP L  L    + F           E++ +  I   
Sbjct: 97  FGLLCGALPAVRATLSPLITLFALIPPLAVLPILFIVFGLG--------EVSKVVLIMVG 148

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +   +   + ++P++    +++      Q  W + +P  MP L+  + +S+S  W 
Sbjct: 149 ITPFIVRDLQLYIQSLPQEQLVKAQTLGGHSGQILWRVILPQLMPRLLDAVRLSLSSAWL 208

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           F++        + +    G+G  I L  +   +  IL  +  +  + FL D LL
Sbjct: 209 FLI------AAEAIAATEGLGYRIFLMRRYLAMDVILPYVAWITVLAFLLDVLL 256



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R++  + +++++ +  G+  G  P + + + P   L A  P     P++      
Sbjct: 77  AASLLRLLTGVGLSAVLALVFGLLCGALPAVRATLSPLITLFALIPPLAVLPILFIVFGL 136

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++      +L++ G   +I+ ++     + P +    A +      +    +ILP + 
Sbjct: 137 GEVSK----VVLIMVGITPFIVRDLQLYIQSLPQEQLVKAQTLGGHSGQILWRVILPQLM 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     +   AW   I +           T GLG  I       +   ++  V  + 
Sbjct: 193 PRLLDAVRLSLSSAWLFLIAA------EAIAATEGLGYRIFLMRRYLAMDVILPYVAWIT 246

Query: 564 CFVLALNRFL 573
                L+  L
Sbjct: 247 VLAFLLDVLL 256


>gi|306831429|ref|ZP_07464587.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978336|ref|YP_004288052.1| phosphate transport system permease pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|304426214|gb|EFM29328.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178264|emb|CBZ48308.1| phosphate transport system permease protein pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 305

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 31/268 (11%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMV 77
             ++V  +  IL+   Q+      +  + P+T       D  S    A    L      +
Sbjct: 31  LVLIVFIVAMILIFVAQKGLSTFFVDGVNPLTFLFGSKWDPSSGSFGALPMILGSFIVTI 90

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           +S L     A  AA        +    +L P ++++  IP + +    L   V +  +++
Sbjct: 91  LSALIATPIAIGAAVFMTEVSPKYGAKILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIF 150

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G   G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  
Sbjct: 151 GGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYKEASLAMGATRWQTIWRVILNA 209

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAI 233
           + PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   +
Sbjct: 210 ARPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPTSLTTPAATLTSVLTMGIGNTVMGTV 269

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   L ++   +L M     +  + + R
Sbjct: 270 QNNVLWSLALVLLIMSLGFNMLVKFITR 297



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 77/231 (33%), Gaps = 25/231 (10%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI--GFRPHIS 415
           G+   +  +             + +   +    ++  +IA+ I I   +++      + +
Sbjct: 57  GVNPLTFLFGSKWDPSSGSFGALPMILGSFIVTILSALIATPIAIGAAVFMTEVSPKYGA 116

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             +QP  +LL   P+ V+         P V S            + +L +      + F 
Sbjct: 117 KILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFM 175

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +    A P  +KE + +   T W+    +IL    P   T  I     A+  ++  ++ 
Sbjct: 176 TVDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMV 235

Query: 528 SWGHIHLRTT--------------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 + T+              G+G  +  + +      + L +LIM  
Sbjct: 236 VGNSAVVPTSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|325686446|gb|EGD28475.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK72]
          Length = 250

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 87/245 (35%), Gaps = 10/245 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +  ++          + + W  +     +          +     +D  ++      T+ 
Sbjct: 5   QRLMRQQIALLGILGVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLK 64

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             ++ +++  I+   + I +     ++  I P   ++   P     P++V  + Y     
Sbjct: 65  VALLGLVLGVILACMLAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYG---- 120

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +L+I  T + I+ +++ G      D   +        W+   +  +P   PY+  
Sbjct: 121 ILPKIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASSPYFYA 180

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +   A+  ++VSE            GLG Y+ +S +   +  +   ++++    L 
Sbjct: 181 GLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSVISLL 234

Query: 569 LNRFL 573
             + +
Sbjct: 235 GMKLV 239



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 86/237 (36%), Gaps = 18/237 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMV 77
           +    ++  ++   + G  +      +   + I      D   L  ++  T    L  +V
Sbjct: 12  IALLGILGVLVIWQVMGWLKLLPKFILPTPLEIGQAFIRDAGFLASHSWATLKVALLGLV 71

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + ++   + A L      L  ++ P++ ++Q+IP +      V++             L 
Sbjct: 72  LGVILACMLAILMDSMSWLNDLIYPMMVVVQTIPTIALAPILVLWLGYGI--------LP 123

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  I  +  + +  S+     +  RD   +    + + WQ  W+  +P S P     + 
Sbjct: 124 KIVLIILTTTFPIIVSILDGFRHCDRDTLTLFELMQANRWQILWHFKIPASSPYFYAGLR 183

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +S+S  +   V SE +          G+G Y+  + K      +   ++ +  +  L
Sbjct: 184 VSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLFQYDTMFAIIILVSVISLL 234


>gi|167748585|ref|ZP_02420712.1| hypothetical protein ANACAC_03358 [Anaerostipes caccae DSM 14662]
 gi|167651899|gb|EDR96028.1| hypothetical protein ANACAC_03358 [Anaerostipes caccae DSM 14662]
          Length = 512

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 15/153 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V   L ++ +R     + +++ + +IP +  L F + +               A+ A+  
Sbjct: 40  VVGILISEYQRYAKPALGLINFLYTIPSISMLGFLIPFSGIGN--------ATAVIALTV 91

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  M  + +  + NI   + E ++    +  Q  + + +P +MP ++  +        
Sbjct: 92  YALLPMVRNTHTGMSNIDEGILEAAKGMGSTRAQILFKIKLPLAMPVIMSGIR------- 144

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             V  +  +    + I   G+G  I   I   +
Sbjct: 145 NMVTMTIALTGIASFIGAGGLGVAIYRGITTNN 177



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VGI I      +         L   P+      ++      +    + L++  +      
Sbjct: 41  VGILISEYQRYAKPALGLINFLYTIPSISMLGFLIPFSGIGNATAVIALTVYALL----P 96

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++ N   G S       E A     T  +    I LP   P  ++G         N   +
Sbjct: 97  MVRNTHTGMSNIDEGILEAAKGMGSTRAQILFKIKLPLAMPVIMSGIR-------NMVTM 149

Query: 524 SEVASWGHIHLRTTGLGAYIAE--STEKGSF 552
           +   +     +   GLG  I    +T  G+ 
Sbjct: 150 TIALTGIASFIGAGGLGVAIYRGITTNNGAM 180


>gi|224535457|ref|ZP_03675996.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522923|gb|EEF92028.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 394

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    A   ++  + ++  +L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLSVAIYMSEVANPKVRNLLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGAHYEALFLLGVVLFFISLL 381



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+IA    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILIALPFGLSVAIYMSEVANPKVRNLLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHT 339


>gi|85703542|ref|ZP_01034646.1| ABC transporter, permease protein [Roseovarius sp. 217]
 gi|85672470|gb|EAQ27327.1| ABC transporter, permease protein [Roseovarius sp. 217]
          Length = 247

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 90/243 (37%), Gaps = 14/243 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  LV+    + L  +    +P  +     +      +  +A+ T   +L  + +  +  
Sbjct: 12  ALALVLWQALVTLASLPPFILPGPLRVAETLWASRALISHHATITAAEVLIGLALGAILG 71

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            + A   A S     ++ P++   Q+IP+        ++       KV  A L   F   
Sbjct: 72  GLSAIGLASSHMARRLIRPMMVFSQAIPVFALAPILTLWLGYGLWSKVAMALLIIYF--- 128

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                 +T + + +L   P    +++R    +  +  WY+ VP ++PG    + ++    
Sbjct: 129 -----PVTSAFFDALMRTPPHWLDLARVMGANRRRLMWYIRVPAALPGFASGLRLA---- 179

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
              V A    ++G+ V    G+G  + LA     +  +  A++ +  +       + R  
Sbjct: 180 --AVYAPIGAIIGEWVGASKGLGYLMLLANGRAKIDLMFAALIVLAILTLCLHAGVDRAC 237

Query: 264 IVW 266
             W
Sbjct: 238 RRW 240



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 10/237 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L +    + +  + W  +V   ++          V    +     +     IT   V++
Sbjct: 3   RLVTIATSTALALVLWQALVTLASLPPFILPGPLRVAETLWASRALISHHATITAAEVLI 62

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            + + +I+     I +         I+P      A P     P++   + Y   +     
Sbjct: 63  GLALGAILGGLSAIGLASSHMARRLIRPMMVFSQAIPVFALAPILTLWLGYGLWSKVAMA 122

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L++ F     +           P  + ++A        R   YI +P   P + +G   
Sbjct: 123 LLIIYF----PVTSAFFDALMRTPPHWLDLARVMGANRRRLMWYIRVPAALPGFASGLRL 178

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   A   +I+ E          + GLG  +  +  +     +   ++++    L L
Sbjct: 179 AAVYAPIGAIIGEWVG------ASKGLGYLMLLANGRAKIDLMFAALIVLAILTLCL 229


>gi|300710336|ref|YP_003736150.1| binding-protein-dependent transport systems inner membrane
           component [Halalkalicoccus jeotgali B3]
 gi|299124019|gb|ADJ14358.1| binding-protein-dependent transport systems inner membrane
           component [Halalkalicoccus jeotgali B3]
          Length = 271

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 90/251 (35%), Gaps = 15/251 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P  +  R  P +  L+A +L    + ++ + I E  +P  +     +      L   A+ 
Sbjct: 27  PTALLARAGPPVAVLVALLLAWQALVVV-YAIPELILPSPLDVARALAETYPRLLADAAV 85

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L     ++       V A     SR L   ++P +  ++  P++       ++F    
Sbjct: 86  TALTAGLGLLAGTAIGLVLAFSMTVSRSLARTVLPYVVALRIAPLIAIAPLLFLWFGRGI 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P + +         + +  ++ MT +    L N P     +  S   S W+ F ++ +P 
Sbjct: 146 PARAL--------LVTSLTLFPMTIATLDGLRNTPESYLALLESIGASDWKVFLHVRIPA 197

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P ++    ++ +      V +E + +        G+G  +              A++ 
Sbjct: 198 ATPSVLAGAKIAATLSVIGAVVAEFVALNA------GLGYRVFYTATYLRTAESFAALVV 251

Query: 248 MLGVIFLYDQL 258
           +  +   +  L
Sbjct: 252 LSALGIAFYLL 262



 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 81/249 (32%), Gaps = 10/249 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            ++R        +      V   L + W  +V   AI          V     +    ++
Sbjct: 21  PLVRHSPTALLARAGPPVAVLVALLLAWQALVVVYAIPELILPSPLDVARALAETYPRLL 80

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T     + ++  + I + +   +     ++  + P+   L   P     PL+   
Sbjct: 81  ADAAVTALTAGLGLLAGTAIGLVLAFSMTVSRSLARTVLPYVVALRIAPLIAIAPLLFLW 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                       +LL+   T + +    + G    P  +  +  S   + W+ + ++ +P
Sbjct: 141 FGRG----IPARALLVTSLTLFPMTIATLDGLRNTPESYLALLESIGASDWKVFLHVRIP 196

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  + GA  A   +   ++V+E  +         GLG  +  +       E    ++
Sbjct: 197 AATPSVLAGAKIAATLSVIGAVVAEFVAL------NAGLGYRVFYTATYLRTAESFAALV 250

Query: 561 IMCCFVLAL 569
           ++    +A 
Sbjct: 251 VLSALGIAF 259


>gi|197294983|ref|YP_002153524.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944462|emb|CAR57064.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 238

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L  YA +  L ++ +M +++        L ++ R        + + +I  +IP L  L  
Sbjct: 38  LAYYAGQHMLLVVYSMTLAIAVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAVLAI 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F            + AI A+F + +  +T + Y+ + N+P  L E ++   ++GWQ
Sbjct: 98  ALGIFGIGN--------VPAIVALFLASLLPVTRNAYEGMKNVPAALREAAKGIGMTGWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSG 202
               + +P ++P +V  +  +++ 
Sbjct: 150 SLVRVELPNALPIIVGGVRTALAI 173



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 15/224 (6%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               I + W     I      Q    + +     M  VV  + +A  + +P G+ +  RP
Sbjct: 12  LVAIIAVGWALARGIGAETFKQRSDDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLL-SRP 70

Query: 413 HISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + + F Q+       P+     + +          N+   + +   +   +  N  
Sbjct: 71  RFQRQAERFMQVFNIGNTIPSLAVLAIALGIFGIG----NVPAIVALFLASLLPVTRNAY 126

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G    P   +E A    +TGW+    + LP   P  V G  TA       + ++     
Sbjct: 127 EGMKNVPAALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALAINVGTAPLA----- 181

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +    LG+ I       + P ++LG  +     L L+  +
Sbjct: 182 --YLIGADSLGSLIFPGIYLDNQPLLLLGASLTAILALVLDGIV 223


>gi|74312654|ref|YP_311073.1| putative transport system permease [Shigella sonnei Ss046]
 gi|73856131|gb|AAZ88838.1| putative transport system permease protein [Shigella sonnei Ss046]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|298717539|ref|YP_003730181.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361728|gb|ADI78509.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 251

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 79/213 (37%), Gaps = 14/213 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P        +  +   L  ++  T   +LS M + +L   V A     S  L   ++P
Sbjct: 34  LLPSPAAVATALWDNTGYLGHHSLITLTEILSGMALGVLLGAVLALGMTFSPWLQRWMMP 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++   Q+IP+       V++F      KV  A L   F         +T + +  L  + 
Sbjct: 94  LVITSQAIPVFALAPLLVLWFGFGMSAKVAMAVLVIFF--------PVTSAFFDGLRRVT 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               +++R+   S   +  ++ +  ++P L   + M+ +      VA    ++G+ V   
Sbjct: 146 PGYLDLARTMGASRAAQLRHVRLLAALPALGSGLRMAAA------VAPIGAIIGEWVGSA 199

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            G+G  +  A           A+  ++ +    
Sbjct: 200 EGLGYVMLNANARMQSDLCFAALFILVLMTLTL 232



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 12/230 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            + ++ ++W   +  V   +        V    + +  Y+     IT+  ++  + +  +
Sbjct: 15  SAGLIALWWLATLTSVPAFLLPSPAA--VATALWDNTGYLGHHSLITLTEILSGMALGVL 72

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   + + + F P +   + P      A P     PL+V    +          L++ F 
Sbjct: 73  LGAVLALGMTFSPWLQRWMMPLVITSQAIPVFALAPLLVLWFGFGMSAKVAMAVLVIFF- 131

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +      G       + ++A +   +     R++ L    P   +G   A   A  
Sbjct: 132 ---PVTSAFFDGLRRVTPGYLDLARTMGASRAAQLRHVRLLAALPALGSGLRMAAAVAPI 188

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +I+ E            GLG  +  +  +         + I+    L L
Sbjct: 189 GAIIGEWVG------SAEGLGYVMLNANARMQSDLCFAALFILVLMTLTL 232


>gi|153007690|ref|YP_001368905.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559578|gb|ABS13076.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|154705713|gb|ABS84246.1| putative permease [Ochrobactrum sp. G21]
          Length = 297

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +   T    L   V+      + A     SR L   L+P +   Q+IPIL   
Sbjct: 84  SKRSLIYHGWVTLSSTLLGFVLGSALGVLLAVGIVHSRTLDKSLMPWIITSQTIPILAIA 143

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V    +    ++   + + +  F    + +   M + L +      ++ R++  S 
Sbjct: 144 PMIIVVLNAIGISGLLPKAIISTYLSF----FPVAVGMVKGLRSPDVMHLDLMRTYNASR 199

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q FW L  P +MP L  +M ++++      +  E+         + G+G+ +       
Sbjct: 200 SQVFWKLRWPAAMPFLFTSMQIAVAISLVGAIVGEL-----PTGAVAGLGARLLAGSYYG 254

Query: 237 DLLAIL 242
             + I 
Sbjct: 255 QTVQIW 260



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 74/193 (38%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I   V          +I+ G +T+   ++  ++ S + + + + I     +   + P+  
Sbjct: 73  IWKTVFGVKPSSKRSLIYHGWVTLSSTLLGFVLGSALGVLLAVGIVHSRTLDKSLMPWII 132

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  ++   ++  L  +++  + + + +   ++ G  +      ++ 
Sbjct: 133 TSQTIPILAIAPMIIVVLNAIGISGLLPKAIISTYLSFFPVAVGMVKGLRSPDVMHLDLM 192

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +++ +  + +  +  P   P+  T    A   +   +IV E+ +         GLGA +
Sbjct: 193 RTYNASRSQVFWKLRWPAAMPFLFTSMQIAVAISLVGAIVGELPTGA-----VAGLGARL 247

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 248 LAGSYYGQTVQIW 260


>gi|313891157|ref|ZP_07824776.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120520|gb|EFR43640.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Streptococcus pseudoporcinus SPIN 20026]
          Length = 220

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 75/201 (37%), Gaps = 19/201 (9%)

Query: 64  YASRTTLRMLS----AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           Y     LR        + ++ L       + A+   L   ++ I +++Q+IP L  ++  
Sbjct: 20  YIMAQFLRHFLISAYGVFLAALLGVPLGIIIARKAHLRQFVMGIANVLQTIPSLAMISIL 79

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++                 I  +F   +  +  + Y  + N+  DL +V++   ++  Q+
Sbjct: 80  MLGLGLG--------TKTVIATVFLYSLLPIISNTYTGIKNVSNDLVDVAKGMGMTKSQR 131

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P S+  ++  +          +V +  I      +   G+G  I       +  
Sbjct: 132 LFMVELPLSLSVIMAGIR-------NALVVAIGITAIGAFVGGGGLGDIIVRGTNATNGG 184

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
           AI+ A      ++ ++  ++ 
Sbjct: 185 AIILAGSLPTALMAIFSDIIL 205



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W  + Y  NH     +   +    I+ +     + +A+++ +P+GI I  + H+   + 
Sbjct: 6   TWDQLVYYFNHNGSYIMAQFLRHFLISAY----GVFLAALLGVPLGIIIARKAHLRQFVM 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A +L   P+     +++  +          +   +   +   I+ N   G     ND 
Sbjct: 62  GIANVLQTIPSLAMISILMLGLGLGTKT----VIATVFLYSLLPIISNTYTGIKNVSNDL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +VA    +T  +    + LP      + G   A   A   + +    
Sbjct: 118 VDVAKGMGMTKSQRLFMVELPLSLSVIMAGIRNALVVAIGITAIGAFV 165


>gi|170721763|ref|YP_001749451.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169759766|gb|ACA73082.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 267

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 12/250 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYV 379
                +L   +  R++  L +    +       IAWQ   Y+V            D   +
Sbjct: 3   RPSTPWLNNPTVLRIASPLLVGAVLLGLWQLACIAWQVPVYLVPSPADIGRTLITDGPML 62

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +    +T+    +   +A +I             + + + P+A LL   P     PL++ 
Sbjct: 63  LGALWMTLKITFLSFALAVVIGTLAAFVFVQSRLVEASLFPYAILLQVTPVVAIAPLIII 122

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             S   L   +  +L+      + I+ N + G  +       +      + W+    + +
Sbjct: 123 WCSDTTLALVICATLV----AVFPIIANTVLGLRSVNPGLLNLFRLNRASRWQVLLRLRI 178

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P +  G   A G A   ++V+E  +          L   I ++  + + P +   +
Sbjct: 179 PSALPCFFAGLRIASGLALIGAVVAEFVAGTGGTGAG--LAYQILQAGFQLNIPRLFAAL 236

Query: 560 LIMCCFVLAL 569
           +++    +AL
Sbjct: 237 VLIALTGVAL 246



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 78/228 (34%), Gaps = 10/228 (4%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  +   +    VP        +  D   L      T      +  ++++   + A +  
Sbjct: 33  LACIAWQVPVYLVPSPADIGRTLITDGPMLLGALWMTLKITFLSFALAVVIGTLAAFVFV 92

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR +   L P   ++Q  P++      +++  +     VI A L A+F         + 
Sbjct: 93  QSRLVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVAVF--------PII 144

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L ++   L  + R  R S WQ    L +P ++P     + ++        V +E
Sbjct: 145 ANTVLGLRSVNPGLLNLFRLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIGAVVAE 204

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +           +   I  A  + ++  +  A++ +         L+
Sbjct: 205 FVAGTGGTGAG--LAYQILQAGFQLNIPRLFAALVLIALTGVALFSLM 250


>gi|110642339|ref|YP_670069.1| ABC transporter permease [Escherichia coli 536]
 gi|191169968|ref|ZP_03031522.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli F11]
 gi|300981496|ref|ZP_07175577.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|110343931|gb|ABG70168.1| hypothetical ABC transporter permease protein YehY [Escherichia
           coli 536]
 gi|190909484|gb|EDV69069.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli F11]
 gi|300307569|gb|EFJ62089.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|324013919|gb|EGB83138.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMLQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMLQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|154248941|ref|YP_001409766.1| binding-protein-dependent transport systems inner membrane
           component [Fervidobacterium nodosum Rt17-B1]
 gi|154152877|gb|ABS60109.1| binding-protein-dependent transport systems inner membrane
           component [Fervidobacterium nodosum Rt17-B1]
          Length = 248

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 10/173 (5%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +G  IG    +    +PF   + AFP   +  LV+         P +   L ++   
Sbjct: 72  GVFIGFIIGLNETLYEIFRPFVLFIQAFPIITWLALVMFIWGIGWTGPVVVSFLSLLPHA 131

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
               + +   G         E+A  +++   +  + I L  I P +V+      G  W  
Sbjct: 132 ----ILSTAIGIQTTDKRLIEMAQVYNVKRSKVVKDIYLGSILPQFVSTIQVVIGNVWKV 187

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +VSE            G+G  IA + +  S  +V    +I+    L +  F+
Sbjct: 188 VVVSEYMCGDK------GIGVLIAWARQSVSVEKVYAYTMIIITIGLFVENFV 234



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 89/241 (36%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  ++   L+  I +  ++       P  I+  +   L    L      T L+++  + +
Sbjct: 8   LIGIVVIFLIWTIASYFINSQLILPDPLVILRTMLQELSKDILWNSLFYTLLKVVVVLFL 67

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++LF      +   +  L  +  P +  +Q+ PI+ +L   +  +   + G         
Sbjct: 68  TVLFGVFIGFIIGLNETLYEIFRPFVLFIQAFPIITWLALVMFIWGIGWTGP-------- 119

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +   F S + +   S    +    + L E+++ + +   +    + +   +P  V  + +
Sbjct: 120 VVVSFLSLLPHAILSTAIGIQTTDKRLIEMAQVYNVKRSKVVKDIYLGSILPQFVSTIQV 179

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +   W  VV SE +          GIG  IA A +   +  +    + ++ +    +  
Sbjct: 180 VIGNVWKVVVVSEYM------CGDKGIGVLIAWARQSVSVEKVYAYTMIIITIGLFVENF 233

Query: 259 L 259
           +
Sbjct: 234 V 234


>gi|295103441|emb|CBL00985.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Faecalibacterium prausnitzii SL3/3]
          Length = 256

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 82/210 (39%), Gaps = 9/210 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +++ F  +  +  ++ V     + +        P   +  +   L      Q    ++ R
Sbjct: 4   NKQFFRRLLAVAFWLAVWQAAAMAIGQEVFLVSPVQALRTLVQLLPRADFWQRVGFSSGR 63

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   V+  +F+ V A  AA+      +L P++ ++++ P+  F+   +V+         
Sbjct: 64  ILLGFVLGAVFSVVLAVCAARWSAADALLAPVMQLVKATPVASFIILALVWVRG------ 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 ++   F   +  +  ++   +      L E++  FRL   ++   + +P  +P 
Sbjct: 118 ---SALSVLISFLMVLPVLYGAVRTGIAGADVQLLEMAAVFRLPAGRRLRAVWLPAVLPA 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                 +++   W   VA+E+I + +  I 
Sbjct: 175 FRQGCSVALGICWKSGVAAEVIGLPNGSIG 204



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 86/240 (35%), Gaps = 23/240 (9%)

Query: 343 MLDIFWFCVVCGVAIGIA--------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
           +   FW  V    A+ I          Q++  +V      D    +     +  R+++  
Sbjct: 12  LAVAFWLAVWQAAAMAIGQEVFLVSPVQALRTLVQLLPRADFWQRVG---FSSGRILLGF 68

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++ ++  + + +         + + P  QL+ A P   F  L +  V    L+  + +S 
Sbjct: 69  VLGAVFSVVLAVCAARWSAADALLAPVMQLVKATPVASFIILALVWVRGSALS--VLISF 126

Query: 455 LMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LM+      +L+  V  G +       E+A+ F +   R  R + LP + P +  G   A
Sbjct: 127 LMVL----PVLYGAVRTGIAGADVQLLEMAAVFRLPAGRRLRAVWLPAVLPAFRQGCSVA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G  W + + +EV    +       +G  +  +    S  E+     ++        +  
Sbjct: 183 LGICWKSGVAAEVIGLPNGS-----IGDALYRAKITLSTGELFAWTFVIILLSAGFEKLF 237


>gi|238763804|ref|ZP_04624762.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           kristensenii ATCC 33638]
 gi|238697934|gb|EEP90693.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           kristensenii ATCC 33638]
          Length = 384

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 78/201 (38%), Gaps = 15/201 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R    +L+ ++ ++L          +S R    +   L+I+Q+IP +      +     L
Sbjct: 179 RHLQILLATLIPAVLLGIPLGLFCFRSHRFQGTIFSTLNIIQTIPSIALFGLLIAPLAGL 238

Query: 127 YPGKVIGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  A+          AI A+    +  +  ++   L  +P  + E +R   ++  Q
Sbjct: 239 AAAIPWLADHGVSGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRTQ 298

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P +MP ++  + +         V + +I  G       G+G+ +   +    L
Sbjct: 299 LFFRVQIPIAMPFILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSAL 351

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  ++ ++ +  + D L 
Sbjct: 352 DLVLLGVIPVIVMAVVVDSLF 372



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  +I A ++ IP+G++          I     ++   P+   F L+++ ++    
Sbjct: 181 LQILLATLIPAVLLGIPLGLFCFRSHRFQGTIFSTLNIIQTIPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 241 AIPWLADHGVSGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRTQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P+ ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FRVQIPIAMPFILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVIVMAVVVDSLF 372


>gi|92116049|ref|YP_575778.1| binding-protein-dependent transport systems inner membrane
           component [Nitrobacter hamburgensis X14]
 gi|91798943|gb|ABE61318.1| binding-protein-dependent transport systems inner membrane
           component [Nitrobacter hamburgensis X14]
          Length = 279

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++     V     + W  VV    I         +V     QD   +      T+     
Sbjct: 26  RVLLPVAVLAAGVLVWDLVVRINGIPPYVLPGPMLVAATLVQDWPILWQSLLTTLLTTGE 85

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
               A++  + + +       +   + P+A +L   P     PL++      +L     +
Sbjct: 86  GFAAATVGGVALALLFNQSKWLEHALLPYAIILQVTPVIAIAPLLLI-----YLPQQTAV 140

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +       + +L N   G ++   +   +   +  +  +  RY+ LP   PY + G   
Sbjct: 141 VVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFQLYGASRMQTLRYLKLPAALPYILGGLRI 200

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A G +   ++V+E+A+          L   IAES  + + P +   +L++    + +
Sbjct: 201 AGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALLLLSVAGIVI 255



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 91/242 (37%), Gaps = 12/242 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   +  L A VLV  ++  + +GI    +P  ++    +  D   L Q    T L   
Sbjct: 26  RVLLPVAVLAAGVLVWDLVVRI-NGIPPYVLPGPMLVAATLVQDWPILWQSLLTTLLTTG 84

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                + +     A L  +S+ L   L+P   I+Q  P++      ++Y         + 
Sbjct: 85  EGFAAATVGGVALALLFNQSKWLEHALLPYAIILQVTPVIAIAPLLLIY---------LP 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            + A +   +    + +  +    L ++ R+L  + + +  S  Q   YL +P ++P ++
Sbjct: 136 QQTAVVVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFQLYGASRMQTLRYLKLPAALPYIL 195

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++        V +E+            +   IA +    ++  +  A+L +     
Sbjct: 196 GGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALLLLSVAGI 253

Query: 254 LY 255
           + 
Sbjct: 254 VI 255


>gi|257866737|ref|ZP_05646390.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257872746|ref|ZP_05652399.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC10]
 gi|257876329|ref|ZP_05655982.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC20]
 gi|325567166|ref|ZP_08143833.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|257800695|gb|EEV29723.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257806910|gb|EEV35732.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC10]
 gi|257810495|gb|EEV39315.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC20]
 gi|325158599|gb|EGC70745.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 220

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       L +K  RL   ++   +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFASIVGIPIGILISKKMRLADWVIRFANIIQTIPSLAMISILMIGMGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  IF   +  +  + Y  +  + R+  +V +   ++ WQ+ + + +
Sbjct: 86  GV--------NVVILTIFLYSLLPIIKNTYTGMRQVDRNTLDVGKGMGMTSWQRLYMIEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGASIILAG 190

Query: 246 LTMLGVIFLYDQL 258
                ++ +   L
Sbjct: 191 ALPTALMAIITDL 203



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 15/208 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++  YV           +  ++ ASI+ IP+GI I  +  ++  +  FA ++   P+   
Sbjct: 16  ENGGYVFAQFIRHFLISIYGVLFASIVGIPIGILISKKMRLADWVIRFANIIQTIPSLAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + L +   +   I+ N   G      +  +V     +T W+ 
Sbjct: 76  ISILMIGMGLG----VNVVILTIFLYSLLPIIKNTYTGMRQVDRNTLDVGKGMGMTSWQR 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I LP      + G   A   A   + +      G       GLG  I   T      
Sbjct: 132 LYMIELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGA 184

Query: 554 EVVLG----VLIMCCFVLALNRFLWHPL 577
            ++L       +M         F+   L
Sbjct: 185 SIILAGALPTALMAIITDLGLSFIERRL 212


>gi|218699260|ref|YP_002406889.1| putative ABC transporter permease [Escherichia coli IAI39]
 gi|218369246|emb|CAR17003.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli IAI39]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|331673655|ref|ZP_08374418.1| putative transport system permease protein [Escherichia coli TA280]
 gi|331068928|gb|EGI40320.1| putative transport system permease protein [Escherichia coli TA280]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHLLWRWLLHMQIAIIPLWLLYAGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|167755789|ref|ZP_02427916.1| hypothetical protein CLORAM_01304 [Clostridium ramosum DSM 1402]
 gi|237734756|ref|ZP_04565237.1| ABC transporter [Mollicutes bacterium D7]
 gi|167704728|gb|EDS19307.1| hypothetical protein CLORAM_01304 [Clostridium ramosum DSM 1402]
 gi|229382084|gb|EEO32175.1| ABC transporter [Coprobacillus sp. D7]
          Length = 240

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 14/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R+  +  ++L+   +    +   + +   L PI   +Q+IP + ++   +V+F  
Sbjct: 52  GATLSRVALSFFLALIVGTILGVFSGLFKSVNEYLAPIFSFLQTIPQIAYILILLVWF-- 109

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K + A +  +  +     +N   +    + NI  DL +V+  +         ++ +
Sbjct: 110 ----KSLTALIIIVLLMILPVFYNNAVN---GIKNISNDLNDVTILYHHPFKFNLIHVYL 162

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P     +V  +  ++       V +E+ V  +      GIG  +  A  + D+++I    
Sbjct: 163 PLIKGYIVSAVETALPQSLKVGVMAEIFVSSNQ-----GIGKQLYFARAQIDMVSIFAWT 217

Query: 246 LTMLGVIFLYDQL 258
           + M+ +I L    
Sbjct: 218 IWMVIIIMLITYF 230



 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 77/227 (33%), Gaps = 13/227 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGI 406
           W      +   +       + N           ++    T+ RV +   +A I+   +G+
Sbjct: 15  WQGFALSIDKAVILPLPLVVFNQMFNLATSQSFYIAIGATLSRVALSFFLALIVGTILGV 74

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
           + G    ++  + P    L   P   +  +++          +L   ++++      + +
Sbjct: 75  FSGLFKSVNEYLAPIFSFLQTIPQIAYILILLVWF------KSLTALIIIVLLMILPVFY 128

Query: 467 NVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           N    G     ND  +V   +H        ++ LP I  Y V+   TA   +    +++E
Sbjct: 129 NNAVNGIKNISNDLNDVTILYHHPFKFNLIHVYLPLIKGYIVSAVETALPQSLKVGVMAE 188

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +    +      G+G  +  +  +     +    + M   ++ +  F
Sbjct: 189 IFVSSNQ-----GIGKQLYFARAQIDMVSIFAWTIWMVIIIMLITYF 230


>gi|191636887|ref|YP_001986053.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|227533459|ref|ZP_03963508.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|239630873|ref|ZP_04673904.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065197|ref|YP_003787220.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Lactobacillus casei str. Zhang]
 gi|190711189|emb|CAQ65195.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|227188909|gb|EEI68976.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|239527156|gb|EEQ66157.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300437604|gb|ADK17370.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei str. Zhang]
 gi|327380918|gb|AEA52394.1| Proline/glycine betaine ABC transporter permease [Lactobacillus
           casei LC2W]
 gi|327384090|gb|AEA55564.1| Proline/glycine betaine ABC transporter permease [Lactobacillus
           casei BD-II]
          Length = 220

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
             A+ R L   ++ I +++Q+IP L  L+  ++                 I  +F   + 
Sbjct: 49  AIARHRTLSSTVIGIANVIQTIPSLAMLSIIMLGLGLGV--------NTVIVTVFLYSLL 100

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  + N+ ++L + ++   ++ WQ  + + +P SM  ++  +          +V
Sbjct: 101 PIIKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSMSVIMAGIR-------NALV 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +  I      +   G+G  I       +  AI+ A      ++ +   L+ 
Sbjct: 154 VAIGITAIGAFVGAGGLGDIIVRGTNATNGGAIILAGALPTALMAIISDLVL 205



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 19/222 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ   Y + +     +        I+++ V++  II   I     + I     +SS + 
Sbjct: 6   TWQQFWYYLANNGSYVLSQFARHFLISIYGVLIAAIIGIPIG----LAIARHRTLSSTVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +   +   I+ N   G      + 
Sbjct: 62  GIANVIQTIPSLAMLSIIMLGLGLGVNT----VIVTVFLYSLLPIIKNTYTGMQNVDKNL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A    +T W+    + +P      + G   A   A   + +      G       GL
Sbjct: 118 MDAAKGMGMTRWQSLYMVEIPLSMSVIMAGIRNALVVAIGITAIGAFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
           G  I   T   +   ++L       +M      +  FL   L
Sbjct: 171 GDIIVRGTNATNGGAIILAGALPTALMAIISDLVLGFLERRL 212


>gi|328957278|ref|YP_004374664.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Carnobacterium sp. 17-4]
 gi|328673602|gb|AEB29648.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Carnobacterium sp. 17-4]
          Length = 211

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 70/190 (36%), Gaps = 19/190 (10%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ + ++       L  +  +    ++ +  I+Q++P L  L   +  F          
Sbjct: 25  IALALGVIVAVPLGVLLTRFEKSAKFIIGLATILQTVPSLALLALMIPLFGIG------- 77

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            ++ AI A+F   +  +  + Y  +  +  +L +  +   ++  Q    + +P + P ++
Sbjct: 78  -KVPAIVALFIYSLLPILRNTYIGMNGVDVNLRDAGKGMGMTSVQLIRNVELPQAAPVIM 136

Query: 194 WNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + +S      W  +          + I   G+G +I   +       I+   + +  +
Sbjct: 137 AGIRLSGVYVISWAAL---------ASYIGAGGLGDFIFNGLNLFIPSLIIGGTIPVTIL 187

Query: 252 IFLYDQLLFR 261
             L D  L +
Sbjct: 188 ALLTDYALGK 197



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 63/189 (33%), Gaps = 15/189 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +   + + +  I+ +P+G+ +      +  I   A +L   P+     L++        
Sbjct: 20  FYISAIALALGVIVAVPLGVLLTRFEKSAKFIIGLATILQTVPSLALLALMIPLFGIG-- 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + +   +   IL N   G +    + ++      +T  +  R + LP   P  
Sbjct: 78  --KVPAIVALFIYSLLPILRNTYIGMNGVDVNLRDAGKGMGMTSVQLIRNVELPQAAPVI 135

Query: 507 VTGAITA--CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + G   +     +W A            ++   GLG +I           ++ G + +  
Sbjct: 136 MAGIRLSGVYVISWAAL---------ASYIGAGGLGDFIFNGLNLFIPSLIIGGTIPVTI 186

Query: 565 FVLALNRFL 573
             L  +  L
Sbjct: 187 LALLTDYAL 195


>gi|323936744|gb|EGB33029.1| inner membrane transport system [Escherichia coli E1520]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|251800093|ref|YP_003014824.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247547719|gb|ACT04738.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 289

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 92/254 (36%), Gaps = 12/254 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +RI P     + F+    +   L  G++   +P+    ++  + +  +L      T    
Sbjct: 33  KRIGPPSIAFILFIGAWELFCRLS-GLKPYLLPKPSDIVLAASENASNLWVSVYTTITEA 91

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   ++S+L    +A L A S+ +   + P   IMQ+IPI+      V++F         
Sbjct: 92  VLGFLLSILLGIGFAILLASSKLIERSIYPYAIIMQTIPIVAIAPIIVIWFGAGM----- 146

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A I   F    + M  +    L +   +++ +   +  S  Q  + L +P ++P +
Sbjct: 147 ---NAIIIIAFLIGFFPMLSNTLIGLNSTDHNMKNLFYLYNASPLQTMFRLRIPAALPYI 203

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + +S +      +  E I              Y       +   A L+A      ++
Sbjct: 204 VAGLKISCTLAVIGAIVGEYIAGIGGGNGGL---GYAITVASSRLQTAYLFACGLSASLL 260

Query: 253 FLYDQLLFRPMIVW 266
            +   LL      W
Sbjct: 261 GIAFFLLVNAFSKW 274



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 87/252 (34%), Gaps = 7/252 (2%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           T   +R    +   +      ++++L I  + + C ++    +             +   
Sbjct: 19  TTTKLRTSSLKKVWKRIGPPSIAFILFIGAWELFCRLSGLKPYLLPKPSDIVLAASENAS 78

Query: 379 VIWLGCITMFR-VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +W+   T     V+  +++ ++ I   I +     I   I P+A ++   P     P++
Sbjct: 79  NLWVSVYTTITEAVLGFLLSILLGIGFAILLASSKLIERSIYPYAIIMQTIPIVAIAPII 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V             + ++      + +L N + G ++  ++ K +   ++ +  +    +
Sbjct: 139 VIWFGAG----MNAIIIIAFLIGFFPMLSNTLIGLNSTDHNMKNLFYLYNASPLQTMFRL 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   PY V G   +C  A   +IV E  +           G  I  ++ +     +  
Sbjct: 195 RIPAALPYIVAGLKISCTLAVIGAIVGEYIAGIGGGNGGL--GYAITVASSRLQTAYLFA 252

Query: 558 GVLIMCCFVLAL 569
             L      +A 
Sbjct: 253 CGLSASLLGIAF 264


>gi|284922116|emb|CBG35197.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   +DV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRRDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|254556517|ref|YP_003062934.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum JDM1]
 gi|254045444|gb|ACT62237.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum JDM1]
          Length = 217

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 21/205 (10%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L  +  ++ + +         A   RL   ++ I +++Q+IP L  L+  ++    
Sbjct: 26  SRHFLISIYGVLFAAIVGIPIGIFIAHHSRLSATVIAIANVIQTIPSLAMLSIIMIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+   + +  +   ++ WQ    + +
Sbjct: 86  GV--------NTVIVTVFLYALLPIIKNTYTGMQNVSASILDSGKGMGMTRWQLLRMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVIMAGLR-------NALVLAIGITAIGTFVGAGGLGDIIIRGTNATNGGAIILAG 190

Query: 246 -LTMLGVIFLYDQLLFRPMIVWSNK 269
            L    +  + D +L      W  K
Sbjct: 191 ALPTALMAIIADTVL-----AWIEK 210



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+ +YV+          +  ++ A+I+ IP+GI+I     +S+ +   A ++   P+   
Sbjct: 16  QNGVYVLSQFSRHFLISIYGVLFAAIVGIPIGIFIAHHSRLSATVIAIANVIQTIPSLAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + + +       I+ N   G         +      +T W+ 
Sbjct: 76  LSIIMIGLGLGVNT----VIVTVFLYALLPIIKNTYTGMQNVSASILDSGKGMGMTRWQL 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP      + G         NA +++   +     +   GLG  I   T   +  
Sbjct: 132 LRMVELPLSLSVIMAGLR-------NALVLAIGITAIGTFVGAGGLGDIIIRGTNATNGG 184

Query: 554 EVVLG 558
            ++L 
Sbjct: 185 AIILA 189


>gi|227496145|ref|ZP_03926451.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces urogenitalis
           DSM 15434]
 gi|226834312|gb|EEH66695.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces urogenitalis
           DSM 15434]
          Length = 266

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 12/246 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLG 383
                         +  +L   W+ V    A+   +      V    +  +    +    
Sbjct: 8   RVSARLRAPLPALTLGLVLVGLWWAVSASQAVPAVFLPSPSGVARRLWLALTQGGLAGYA 67

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +TM   ++  + A+ + +P+   +   P  S  + P+     A PA    PL+V  + Y
Sbjct: 68  WVTMREALLGCLTATCLSLPLAWGLFHWPRFSRTVLPYVAASQAVPAIAIAPLLVLWIGY 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   L  +L++ F     I   V+ G      D  + A      G      + LP   
Sbjct: 128 GTVPVVLLCTLMVFF----PITVTVLLGLRGLDTDVLDAARLDGAHGMSMIMRMELPMAL 183

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++G  T    +   ++V E+   G       GLG  +A   +      +   ++++C
Sbjct: 184 PAILSGLRTGFTLSVTGAVVGEMTMGGQ------GLGMVLAHQRDAVDTAGLFSTIVLLC 237

Query: 564 CFVLAL 569
              +A+
Sbjct: 238 AMAMAI 243



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 14/231 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             +             P  +   + + L    L  YA  T    L   + +   +   A 
Sbjct: 31  WAVSASQAVPAVFLPSPSGVARRLWLALTQGGLAGYAWVTMREALLGCLTATCLSLPLAW 90

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
                 R    ++P +   Q++P +      V++        V+   L   F        
Sbjct: 91  GLFHWPRFSRTVLPYVAASQAVPAIAIAPLLVLWIGYGTVPVVLLCTLMVFF-------- 142

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T ++   L  +  D+ + +R     G      + +P ++P ++  +    +      V
Sbjct: 143 PITVTVLLGLRGLDTDVLDAARLDGAHGMSMIMRMELPMALPAILSGLRTGFTLSVTGAV 202

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             EM + G       G+G  +A      D   +   ++ +  +       L
Sbjct: 203 VGEMTMGGQ------GLGMVLAHQRDAVDTAGLFSTIVLLCAMAMAIHWCL 247


>gi|222033892|emb|CAP76633.1| Inner membrane ABC transporter permease protein yehy [Escherichia
           coli LF82]
 gi|312946749|gb|ADR27576.1| putative transport system permease protein [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 385

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 122 YFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P     G        A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|315299368|gb|EFU58620.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 122 YFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P     G        A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    V   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIVPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGIGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|293567792|ref|ZP_06679133.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1071]
 gi|291589377|gb|EFF21184.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1071]
          Length = 220

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLVNWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  + + +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLVNWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 188

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 189 AGALPTALMAIITDWLLGILERRL 212


>gi|239831105|ref|ZP_04679434.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239823372|gb|EEQ94940.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 303

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +   T    L   V+      + A     SR L   L+P +   Q+IPIL   
Sbjct: 90  SKRSLVYHGWVTLSSTLLGFVLGSALGVLLAVGIVHSRTLDKSLMPWIITSQTIPILAIA 149

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V    +    ++   + + +  F    + +   M + L +      ++ R++  S 
Sbjct: 150 PMIIVVLNAVGISGLLPKAIISTYLSF----FPVAVGMVKGLRSPDVMHLDLMRTYNASR 205

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q FW L  P +MP L  +M ++++      +  E+         + G+G+ +       
Sbjct: 206 SQVFWKLRWPAAMPFLFTSMQIAVAISLVGAIVGEL-----PTGAVAGLGARLLAGSYYG 260

Query: 237 DLLAIL 242
             + I 
Sbjct: 261 QTVQIW 266



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 74/193 (38%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I   V          +++ G +T+   ++  ++ S + + + + I     +   + P+  
Sbjct: 79  IWKTVFGVKPSSKRSLVYHGWVTLSSTLLGFVLGSALGVLLAVGIVHSRTLDKSLMPWII 138

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  ++   ++  L  +++  + + + +   ++ G  +      ++ 
Sbjct: 139 TSQTIPILAIAPMIIVVLNAVGISGLLPKAIISTYLSFFPVAVGMVKGLRSPDVMHLDLM 198

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +++ +  + +  +  P   P+  T    A   +   +IV E+ +         GLGA +
Sbjct: 199 RTYNASRSQVFWKLRWPAAMPFLFTSMQIAVAISLVGAIVGELPTGA-----VAGLGARL 253

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 254 LAGSYYGQTVQIW 266


>gi|293410491|ref|ZP_06654067.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291470959|gb|EFF13443.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|84683761|ref|ZP_01011664.1| putative taurine ABC transport system permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84668504|gb|EAQ14971.1| putative taurine ABC transport system permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 256

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 18/256 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVI 78
           F LL F+++  I+        +      ++                   T  RML  + +
Sbjct: 9   FGLLIFLVIWEIVTATGLVSPDYMPRLALIGAAIWAFVTSGDFWLNFFATVQRMLIGLSV 68

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +++     A +AA+   L   L PI DI++S+     L   +++ + + P          
Sbjct: 69  AVVIAIAVALVAARFALLRRALEPITDILRSL-PPPALVPLLIFVLGITPALFY------ 121

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F I    +W    S   +L  +       ++ + L+ WQ  W + +P +MP +   + +
Sbjct: 122 -FVIIFGCMWATYISASNALSTVEPVQVNTAKIYGLTDWQILWQIRLPAAMPEIFTGIRL 180

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S S       A+EM++ G       G+G+ I  A        +   M  +  +    + L
Sbjct: 181 SASVSLLATTATEMLLGGQ------GLGAMIYNAGFSLLWDQMYALMFIIGLLGIAMNFL 234

Query: 259 LFR---PMIVWSNKFR 271
           +     P+  W +++ 
Sbjct: 235 VAAVRYPLAGWQSRYS 250



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R+++ + +A +I I V +       +   ++P   +L + P     PL++  +  
Sbjct: 56  FATVQRMLIGLSVAVVIAIAVALVAARFALLRRALEPITDILRSLPPPALVPLLIFVLGI 115

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                      ++IFG  W    +     S         A  + +T W+    I LP   
Sbjct: 116 TPA----LFYFVIIFGCMWATYISASNALSTVEPVQVNTAKIYGLTDWQILWQIRLPAAM 171

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   TG   +   +  A+  +E+   G       GLGA I  +     + ++   + I+ 
Sbjct: 172 PEIFTGIRLSASVSLLATTATEMLLGGQ------GLGAMIYNAGFSLLWDQMYALMFIIG 225

Query: 564 CFVLALNRFL 573
              +A+N  +
Sbjct: 226 LLGIAMNFLV 235


>gi|325300707|ref|YP_004260624.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           salanitronis DSM 18170]
 gi|324320260|gb|ADY38151.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           salanitronis DSM 18170]
          Length = 397

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++I+L F    +   A+  + +    L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILIALPFGLAISIYLAEVANEKTRKFLKPIIELLNGIPSVVYGFFGLAVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +   V  + LA    +    +  +      ++ + PR + E S +   + WQ  +
Sbjct: 238 FLQQTFNLPVGESGLAGSLVLAIMALPTIITVGEDAMRSCPRSMREASLALGATQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     V+      PL  I + IA  + E
Sbjct: 298 KVVIPFSISGITSGIVLGIGRAIGETMAVLMVTGNAAVMPHSILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGVI  +  L+
Sbjct: 358 APAGGAHYQSLFLLGVILFFITLI 381



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 61/184 (33%), Gaps = 18/184 (9%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPF 421
               T   +  ++ L   T++    +   A +I +P G+ I               ++P 
Sbjct: 160 FPTATPSPIFGILPLISGTLW----VSFFAILIALPFGLAISIYLAEVANEKTRKFLKPI 215

Query: 422 AQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +LL   P+ V+         P +    +       L  SL++       I+        
Sbjct: 216 IELLNGIPSVVYGFFGLAVIVPFLQQTFNLPVGESGLAGSLVLAIMALPTIITVGEDAMR 275

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P   +E + +   T W+    +++P       +G +   G A   ++   + +     
Sbjct: 276 SCPRSMREASLALGATQWQTIYKVVIPFSISGITSGIVLGIGRAIGETMAVLMVTGNAAV 335

Query: 534 LRTT 537
           +  +
Sbjct: 336 MPHS 339


>gi|260558420|ref|ZP_05830616.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|261207136|ref|ZP_05921825.1| inner membrane component transport system [Enterococcus faecium TC
           6]
 gi|260075594|gb|EEW63900.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|260078764|gb|EEW66466.1| inner membrane component transport system [Enterococcus faecium TC
           6]
          Length = 217

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 23  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 83  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+ A 
Sbjct: 135 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGTSIILAG 187

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 188 ALPTALMAIITDWLL 202



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 17  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 77  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 133 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGTSIIL 185

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 186 AGALPTALMAIITDWLLGILERRL 209


>gi|126699514|ref|YP_001088411.1| ABC transporter permease [Clostridium difficile 630]
 gi|115250951|emb|CAJ68779.1| ABC-type transport system, permease [Clostridium difficile]
          Length = 266

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+++  ++  L +      + P DI ++         L ++   +    +  +VI  
Sbjct: 32  LIGFIVIWELLAYLNVINTFLFSKPSDIYNLFIQYAFSGQLFKHIGISVYETVLGLVIGT 91

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   + A     S +L  +L P L ++ ++P        +V+      G V+ A   ++ 
Sbjct: 92  VLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPIIIVWVGAGIEGIVVTAVTISVV 151

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       S Y    NI  +  ++ +SF  +  Q  + L +P +   L+    +++
Sbjct: 152 V--------TILSAYNYFMNIDEEKIKMLKSFGATKSQILFKLILPANTGNLINLTKINI 203

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
              W  V+  E +V         GIG  I    +   L  ++  +  +  
Sbjct: 204 GMAWVGVIVGEFLV------SRYGIGYLIVYGSQVFKLDLVMMGVFVLAI 247



 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++  V+ ++I +++ I V I + +   +S  + PF  +L A P     P+
Sbjct: 70  GQLFKHIGISVYETVLGLVIGTVLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V          + +  +  +    + +          +  ++  SF  T  +    
Sbjct: 130 IIVWVGAG----IEGIVVTAVTISVVVTILSAYNYFMNIDEEKIKMLKSFGATKSQILFK 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP      +       G AW   IV E        +   G+G  I   ++      V+
Sbjct: 186 LILPANTGNLINLTKINIGMAWVGVIVGEFL------VSRYGIGYLIVYGSQVFKLDLVM 239

Query: 557 LGVLIMCC 564
           +GV ++  
Sbjct: 240 MGVFVLAI 247


>gi|83594783|ref|YP_428535.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83577697|gb|ABC24248.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 298

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 9/206 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
                L  +   T    L   V+  L   V A    + R L   L+P +   Q+IPIL  
Sbjct: 89  TSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAI 148

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               VV    +    ++   + +++  F    + +T  M + L +      ++ R++   
Sbjct: 149 APMVVVVLGAIGLTGLVPKAIISMYLCF----FPVTVGMVKGLRSADALSMDLMRTYAAR 204

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P ++P L  +M ++++      +  E+           G+G+ +      
Sbjct: 205 PSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGEL-----PTGAAMGLGARLLAGSYY 259

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
              + +  A++    +      L+ R
Sbjct: 260 GQTVQMWAALVMAAALSLFLVFLVGR 285



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 73/197 (37%), Gaps = 5/197 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T    +V  ++ +++ + + + I     + + + P+       P     P+VV
Sbjct: 94  LLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAIAPMVV 153

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L   +  +++ ++   + +   ++ G  +      ++  ++     + +  + 
Sbjct: 154 VVLGAIGLTGLVPKAIISMYLCFFPVTVGMVKGLRSADALSMDLMRTYAARPSQVFWRLR 213

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY       A   A   +IV E+ +         GLGA +   +  G   ++   
Sbjct: 214 LPAALPYLFASMKVAIAAALVGAIVGELPTGA-----AMGLGARLLAGSYYGQTVQMWAA 268

Query: 559 VLIMCCFVLALNRFLWH 575
           +++     L L   +  
Sbjct: 269 LVMAAALSLFLVFLVGR 285


>gi|284043891|ref|YP_003394231.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948112|gb|ADB50856.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 246

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 21/208 (10%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++ L   T   +++  +++ ++ + VG+ +G    +   ++P+   L A P   + PL+V
Sbjct: 49  LLRLMLNTTSVLLIGFVVSVVVGVLVGLAMGEFRWVRVMLEPYLTALYATPRVAYIPLLV 108

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +         +      I+G       +++VA S  I   +++  ++
Sbjct: 109 IWFGIGRTFLYAAVIAAAAVIIVFP----TISGVHEANRSYRQVADSLCINKLQYFARVL 164

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    + +TGA      A    IV+E        +   GLG  +  +        V L 
Sbjct: 165 LPASTAFVLTGARLGVQRALTTVIVAEFL------VGYPGLGDAMKTARVTTDVDRV-LA 217

Query: 559 VLIMCCFV--------LALNR--FLWHP 576
           + ++C  V          ++R  F W  
Sbjct: 218 IAVVCLVVGAAITGVLTLIDRRAFAWRR 245



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 17/233 (7%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
             T+ P  + D +        L +    TT  +L   V+S++   +      + R + ++
Sbjct: 28  HTTSQPTRVADELVDAFRDDDLLRLMLNTTSVLLIGFVVSVVVGVLVGLAMGEFRWVRVM 87

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           L P L  + + P + ++   V++F             AA   I         F     + 
Sbjct: 88  LEPYLTALYATPRVAYIPLLVIWFGIGRTFLYAAVIAAAAVII--------VFPTISGVH 139

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
              R   +V+ S  ++  Q F  + +P S   ++    + +      V+ +E +V     
Sbjct: 140 EANRSYRQVADSLCINKLQYFARVLLPASTAFVLTGARLGVQRALTTVIVAEFLVG---- 195

Query: 220 IPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              PG+G  +  A        +LAI    L +   I     L+ R    W  +
Sbjct: 196 --YPGLGDAMKTARVTTDVDRVLAIAVVCLVVGAAITGVLTLIDRRAFAWRRR 246


>gi|315282314|ref|ZP_07870748.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria marthii FSL S4-120]
 gi|313614035|gb|EFR87745.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Listeria marthii FSL S4-120]
          Length = 223

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALALLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ    + +P
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +          +V +  +    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGIR-------NALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLLF 260
               V+ +   LL 
Sbjct: 189 IPTAVMAILADLLL 202



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALALLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   IL N   G         E   +  +T W+  R I +P      + G 
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + +      G       GLG  I   T   +   ++L   I    +  L 
Sbjct: 146 RNALVIAIGVAAIGTFVGAG-------GLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198

Query: 571 RFL 573
             L
Sbjct: 199 DLL 201


>gi|300948229|ref|ZP_07162350.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300452235|gb|EFK15855.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 ARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHSLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G R + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGARRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|239831054|ref|ZP_04679383.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239823321|gb|EEQ94889.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 258

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 10/245 (4%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                   +       + +    W  VV    +          V      +   +     
Sbjct: 5   LSNRSRMKRAADGLLSAAVALAIWQAVVSIGQMPRFILPGPLDVVQALIANAGLIAENAA 64

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+  V+  + + S + I   I +   P     + P      A P     P++   + Y 
Sbjct: 65  ATIGEVLGGLALGSAVGIATAICLMMSPLAQRLVMPAMVFSQAIPIFALAPILTLWLGYG 124

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  + +++LMIF   + ++     G     +   + A             I +P  FP
Sbjct: 125 PAS-KIAVTVLMIF---FPVVSTFFDGMRRTDSSLIDAAEILGAGRMAILFRIRIPSAFP 180

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +G   A   A   ++V E          + GLG  +  +  +     +   + ++  
Sbjct: 181 SLASGLSLAAVYAPIGAVVGEWVG------ASKGLGYLMLLANGRAKVDLMFACLFVLAA 234

Query: 565 FVLAL 569
           F + L
Sbjct: 235 FTMLL 239



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 78/250 (31%), Gaps = 17/250 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETT---VPRDIVDIVPITLDVHSLPQYA 65
              +R       D L    V   I   +  I +     +P  +  +  +  +   + + A
Sbjct: 4   ALSNRSRMKRAADGLLSAAVALAIWQAVVSIGQMPRFILPGPLDVVQALIANAGLIAENA 63

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + T   +L  + +        A     S     +++P +   Q+IPI        ++   
Sbjct: 64  AATIGEVLGGLALGSAVGIATAICLMMSPLAQRLVMPAMVFSQAIPIFALAPILTLWLGY 123

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               K+    L   F + ++         +  +      L + +           + + +
Sbjct: 124 GPASKIAVTVLMIFFPVVST--------FFDGMRRTDSSLIDAAEILGAGRMAILFRIRI 175

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P L   + ++       V A    VVG+ V    G+G  + LA     +  +   +
Sbjct: 176 PSAFPSLASGLSLA------AVYAPIGAVVGEWVGASKGLGYLMLLANGRAKVDLMFACL 229

Query: 246 LTMLGVIFLY 255
             +     L 
Sbjct: 230 FVLAAFTMLL 239


>gi|163942513|ref|YP_001647397.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
 gi|163864710|gb|ABY45769.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus weihenstephanensis KBAB4]
          Length = 268

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +   + + P ++  + P+  +L A P     P+++       
Sbjct: 77  TLLETGVGFILGTVLGAIIATLLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 133

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++++ILP  FP
Sbjct: 134 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 192 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + ATL      L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATLLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ + ++ +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|157161612|ref|YP_001458930.1| quaternary amine ABC transporter permease [Escherichia coli HS]
 gi|194436371|ref|ZP_03068473.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 101-1]
 gi|253772942|ref|YP_003035773.1| binding-protein-dependent transporters inner membrane component
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162145|ref|YP_003045253.1| putative transporter subunit membrane component of ABC superfamily
           [Escherichia coli B str. REL606]
 gi|300929305|ref|ZP_07144779.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|301029465|ref|ZP_07192552.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|157067292|gb|ABV06547.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli HS]
 gi|194425099|gb|EDX41084.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 101-1]
 gi|242377772|emb|CAQ32535.1| yehY, subunit of YehW/YehX/YehY/YehZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253323986|gb|ACT28588.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974046|gb|ACT39717.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253978214|gb|ACT43884.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|299877668|gb|EFI85879.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300462724|gb|EFK26217.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|323961638|gb|EGB57243.1| inner membrane transport system [Escherichia coli H489]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 ARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G R + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGARRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|309702444|emb|CBJ01770.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 ARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G R + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGARRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|300936556|ref|ZP_07151465.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300458319|gb|EFK21812.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 385

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|291617525|ref|YP_003520267.1| OpuCB [Pantoea ananatis LMG 20103]
 gi|291152555|gb|ADD77139.1| OpuCB [Pantoea ananatis LMG 20103]
 gi|327393962|dbj|BAK11384.1| glycine betaine/carnitine/choline transport system permease protein
           OpuCB [Pantoea ananatis AJ13355]
          Length = 215

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 87/213 (40%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           + ++L     + T  +L A+  +++       L  + + L   ++ I  ++ +IP +   
Sbjct: 10  NWNNLLTLTWQHTWLVLVAVGCAIVIGVPLGILIVRFKWLATPVLGIATVVLTIPTIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L N+P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGKGI---GALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGMLL-------LDGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +  + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQLALTPK 212



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +   ++ L     + V+V +  A +I +P+GI I     +++ +   A ++   P
Sbjct: 5   HYIIDNWNNLLTLTWQHTWLVLVAVGCAIVIGVPLGILIVRFKWLATPVLGIATVVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               F L++   S          ++  +   +   I+ N        P+  +E      +
Sbjct: 65  TIALFGLMIPLFSLIGKGIGALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + +          +   
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGMLL-------LDGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|288958335|ref|YP_003448676.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288910643|dbj|BAI72132.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 255

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            LA ++      +   G+    +P  +     +      L  +   T   +L  +   + 
Sbjct: 10  TLAVLVAGWQALVWATGLPRYLLPGPLAVADVLRRQAPLLWTHGLTTLAEILIGLTAGVT 69

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V A L A+ R     L+P+L + Q+IP+       V++       K+  A L   F 
Sbjct: 70  LGGVSALLLARFRTARRWLMPLLLVSQAIPVFALAPLLVLWLGYGMMSKIAMAVLVIYFP 129

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + T+        ++  L        +++R+   S     W + +P ++P     + ++ +
Sbjct: 130 VTTA--------LFDGLRRTDPGWLDLARTMGASPAAMLWNIRLPAALPAFWSGVRVAAA 181

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                 VA    V+G+ V    G+G  +  A     +  +  A+L +             
Sbjct: 182 ------VAPIGAVIGEWVGSSSGLGYLMLHANARMQIDLLFAAVLVLGLFAVTLYAAVDA 235

Query: 259 LFRPMIVWSN 268
           L R  + W  
Sbjct: 236 LARRALPWQP 245



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W  +V    +          V     +    +   G  T+  +++ +     +  
Sbjct: 13  VLVAGWQALVWATGLPRYLLPGPLAVADVLRRQAPLLWTHGLTTLAEILIGLTAGVTLGG 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + +         + P   +  A P     PL+V  + Y  ++      L++ F    
Sbjct: 73  VSALLLARFRTARRWLMPLLLVSQAIPVFALAPLLVLWLGYGMMSKIAMAVLVIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  G       + ++A +   +       I LP   P + +G   A   A   ++
Sbjct: 129 PVTTALFDGLRRTDPGWLDLARTMGASPAAMLWNIRLPAALPAFWSGVRVAAAVAPIGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          ++GLG  +  +  +     +   VL++  F + L
Sbjct: 189 IGEWVG------SSSGLGYLMLHANARMQIDLLFAAVLVLGLFAVTL 229


>gi|254249943|ref|ZP_04943263.1| ABC-type proline/glycine betaine transport systems, permease
           component [Burkholderia cenocepacia PC184]
 gi|124876444|gb|EAY66434.1| ABC-type proline/glycine betaine transport systems, permease
           component [Burkholderia cenocepacia PC184]
          Length = 293

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I  +          +        V   ++DI Q+ 
Sbjct: 88  PVIYDRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTF 147

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V       P    G +   I  +    +  +  S    L ++PRD+ + +R
Sbjct: 148 PPVAVLALAV-------PAVGFGLKPVLIALVLYGLL-PIFESTIAGLEDVPRDVVDAAR 199

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 200 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 252

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 253 AGLQTSNTAFVLQGGVIVGLLAVLV 277



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +I+ +  GI +  RP  +  +   +    +   FP  
Sbjct: 92  DRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAV-TRPFGADFLPVARSVVDIGQTFPPV 150

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 151 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 206

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 207 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 259

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 260 TAFVLQGGVIVGLLAVLV 277


>gi|227893628|ref|ZP_04011433.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
 gi|227864488|gb|EEJ71909.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
          Length = 210

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 5/184 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +II+ II +P+G        I++  Q FAQ+L   P+     +++  +    +
Sbjct: 24  LFISLTALIISLIIALPLGYLGSRNKVIAAFCQTFAQILRIVPSLALLFILIPFIGTGIV 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L        I+ N I G +      KE+  S  +   +  + I LP   PY 
Sbjct: 84  PALIALVVL----ALPPIMVNTILGFNEVSPVLKEIGLSLGMNQMQLLKQITLPLALPYI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHI-HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A     +++ ++     G +  L  TGLG Y  +    G     +L +L M   
Sbjct: 140 LNGIKLALVEIISSATLATYIGAGGLGTLIFTGLGLYKMQYVVIGGVSVALLSLLSMFIM 199

Query: 566 VLAL 569
             A+
Sbjct: 200 DFAI 203



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 78/208 (37%), Gaps = 19/208 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
                +    Y S+     L+A++ISL+       L ++++ +         I++ +P L
Sbjct: 9   FATSSNEYWGYVSQHLFISLTALIISLIIALPLGYLGSRNKVIAAFCQTFAQILRIVPSL 68

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + +             + A+ A+    +  +  +       +   L+E+  S  
Sbjct: 69  ALLFILIPFIGTGI--------VPALIALVVLALPPIMVNTILGFNEVSPVLKEIGLSLG 120

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIAL 231
           ++  Q    + +P ++P ++  + +++          E+I      T I   G+G+ I  
Sbjct: 121 MNQMQLLKQITLPLALPYILNGIKLAL---------VEIISSATLATYIGAGGLGTLIFT 171

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +    +  ++   +++  +  L   ++
Sbjct: 172 GLGLYKMQYVVIGGVSVALLSLLSMFIM 199


>gi|158423681|ref|YP_001524973.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330570|dbj|BAF88055.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 259

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 78/254 (30%), Gaps = 14/254 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             F         +  L   W+ +    A+         +V    +    Y+      T  
Sbjct: 3   RRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATTAL 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            + + +    ++   V + +   P +   + P   +  A P     P++V  + +   + 
Sbjct: 63  EIGLGLFFGVLMGASVALAMAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLASK 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +   L++ F     +      G       + ++A +   +     R+I L    P   +
Sbjct: 123 VMMAVLIIFF----PVAATFHDGLRRTEPGWLDLARTMRASRAAELRHIRLMAALPALGS 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   A   +++ E            GLG  +  +  +         + I+    +A
Sbjct: 179 GLRVAAAVAPIGAVIGEWVG------AAGGLGYVMLNANARMQTALCFAALFILAVMAVA 232

Query: 569 L----NRFLWHPLY 578
           L    +  L   LY
Sbjct: 233 LWQLVDVLLRRILY 246



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 86/238 (36%), Gaps = 17/238 (7%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  +   +    +P   +    +      L  +A+ T L +   +   +L     A   A
Sbjct: 24  LIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATTALEIGLGLFFGVLMGASVALAMA 83

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            S  +   L P++ + Q+IP+       V++       KV+ A L   F +  +      
Sbjct: 84  ASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLASKVMMAVLIIFFPVAAT------ 137

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
              +  L        +++R+ R S   +  ++ +  ++P L   + ++ +      VA  
Sbjct: 138 --FHDGLRRTEPGWLDLARTMRASRAAELRHIRLMAALPALGSGLRVAAA------VAPI 189

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             V+G+ V    G+G  +  A           A+  +  +     QL   L R ++ W
Sbjct: 190 GAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVLLRRILYW 247


>gi|28378310|ref|NP_785202.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum WCFS1]
 gi|300767246|ref|ZP_07077158.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308180460|ref|YP_003924588.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28271145|emb|CAD64050.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum WCFS1]
 gi|300495065|gb|EFK30221.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045951|gb|ADN98494.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 217

 Score = 74.6 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 21/205 (10%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           SR  L  +  ++ + +         A   RL   ++ I +++Q+IP L  L+  ++    
Sbjct: 26  SRHFLISIYGVLFAAIVGIPIGIFIAHHSRLSATVIAIANVIQTIPSLAMLSIIMIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+   + +  +   ++ WQ    + +
Sbjct: 86  GV--------NTVIVTVFLYALLPIIKNTYTGMQNVSASILDSGKGMGMTRWQLLRMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I    T +   G+G  I       +  AI+ A 
Sbjct: 138 PLSLSVIMAGLR-------NALVLAIGITAIGTFVGAGGLGDIIIRGTNATNGGAIILAG 190

Query: 246 -LTMLGVIFLYDQLLFRPMIVWSNK 269
            L    +  + D +L      W  K
Sbjct: 191 ALPTALMAIIADTVL-----AWIEK 210



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+ +YV+          +  ++ A+I+ IP+GI+I     +S+ +   A ++   P+   
Sbjct: 16  QNGVYVLSQFSRHFLISIYGVLFAAIVGIPIGIFIAHHSRLSATVIAIANVIQTIPSLAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + + +       I+ N   G         +      +T W+ 
Sbjct: 76  LSIIMIGLGLGVNT----VIVTVFLYALLPIIKNTYTGMQNVSASILDSGKGMGMTRWQL 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP      + G         NA +++   +     +   GLG  I   T   +  
Sbjct: 132 LRMVELPLSLSVIMAGLR-------NALVLAIGITAIGTFVGAGGLGDIIIRGTNATNGG 184

Query: 554 EVVLG 558
            ++L 
Sbjct: 185 AIILA 189


>gi|300311042|ref|YP_003775134.1| proline/glycine betaine ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073827|gb|ADJ63226.1| ABC-type proline/glycine betaine transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 237

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS---RRLGMVLVPILDIMQSIPILGF 115
             L  Y  +    + ++M+++L          ++    R     +  I +I  +IP +  
Sbjct: 35  GDLIYYTGKHLELVFTSMLLALATGIPAGIALSRPGAQRSAEKFIQ-IFNIGNTIPSIAV 93

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +F               I A++ + +  +  + Y+ L N+P  ++E +R   + 
Sbjct: 94  LALALAFFGIGNGP--------TILALWLASLLPIVRNTYEGLKNVPAAMKEAARGIGMK 145

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             Q    + +P ++P +V  +  +++ 
Sbjct: 146 PHQILLRVELPNALPIIVGGVRTALAI 172



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 12/167 (7%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---G 409
             V  G+ W     ++  +       +I+     +  V   +++A    IP GI +   G
Sbjct: 15  ALVLAGLVWWIGPDVIQKYR----GDLIYYTGKHLELVFTSMLLALATGIPAGIALSRPG 70

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            +      IQ    +    P+     L ++         N    L +   +   I+ N  
Sbjct: 71  AQRSAEKFIQ-IFNIGNTIPSIAVLALALAFFGIG----NGPTILALWLASLLPIVRNTY 125

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            G    P   KE A    +   +    + LP   P  V G  TA   
Sbjct: 126 EGLKNVPAAMKEAARGIGMKPHQILLRVELPNALPIIVGGVRTALAI 172


>gi|290956062|ref|YP_003487244.1| ABC transporter [Streptomyces scabiei 87.22]
 gi|260645588|emb|CBG68679.1| ABC transporter protein, membrane protein [Streptomyces scabiei
           87.22]
          Length = 256

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 79/225 (35%), Gaps = 10/225 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            +L S   +  +L   W+    G            +           V      ++ R+ 
Sbjct: 3   PRLLSAVALPLVLVTVWWFASAGSTDVFWPPLRTILTTFPDVWTAERVRADVLPSLLRLS 62

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +A++  + +G  +G    + S  +P  + L A P  V  P+++             
Sbjct: 63  AGYAVAAVAGVALGTVVGLHRRVRSVCEPVLEFLRAVPPPVLVPVIMLFAGIGDT----M 118

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
              ++  G  W +L N + G  A  +   + A S+ ITG    R+++L    P    G  
Sbjct: 119 RIAVIASGCVWPVLLNTVEGVRAVDSVLTDTARSYGITGAARLRHVVLRSASPQIFAGLR 178

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            A        ++SE+ + G       GLG  + +     + P++ 
Sbjct: 179 QALSIGIILMVISEMTAAGD------GLGHTVVQFQRGFAIPDMW 217



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 80/206 (38%), Gaps = 11/206 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           + P +   +A  LV+  +                R I+   P       +      + LR
Sbjct: 1   MLPRLLSAVALPLVLVTVWWFASAGSTDVFWPPLRTILTTFPDVWTAERVRADVLPSLLR 60

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + +   ++ +      T+    RR+  V  P+L+ ++++P    +   +++       + 
Sbjct: 61  LSAGYAVAAVAGVALGTVVGLHRRVRSVCEPVLEFLRAVPPPVLVPVIMLFAGIGDTMR- 119

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  I +  VW +  +  + +  +   L + +RS+ ++G  +  ++ +  + P 
Sbjct: 120 -------IAVIASGCVWPVLLNTVEGVRAVDSVLTDTARSYGITGAARLRHVVLRSASPQ 172

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGD 217
           +   +  ++S G   +V SEM   GD
Sbjct: 173 IFAGLRQALSIGIILMVISEMTAAGD 198


>gi|261418627|ref|YP_003252309.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y412MC61]
 gi|319765443|ref|YP_004130944.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. Y412MC52]
 gi|261375084|gb|ACX77827.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y412MC61]
 gi|317110309|gb|ADU92801.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. Y412MC52]
          Length = 209

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 15/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L    AM I+++          + R+L   ++ +  I+Q+IP L  L F +  F     
Sbjct: 22  VLLSAIAMSIAIVIAVPLGIALTRYRKLAEPIIGVAAIIQTIPSLALLGFMLPLFGIG-- 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S
Sbjct: 80  ------KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLS 133

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +        V +  +    T I   G+G  I   ++  D   IL   +  
Sbjct: 134 LPVIMAGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILTGAIPA 186

Query: 249 LGVIFLYDQLL 259
             +  ++D LL
Sbjct: 187 AILAIVFDWLL 197



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+GI +     ++  I   A ++   P+      ++       L   +
Sbjct: 26  AIAMSIAIVIAVPLGIALTRYRKLAEPIIGVAAIIQTIPSLALLGFMLPLFGIGKLPAII 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  +      IL N   G         +      +T  +    + LP   P  + G 
Sbjct: 86  ALTLYALL----PILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++     G       GLG  I           ++ G +      +  +
Sbjct: 142 RTATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILTGAIPAAILAIVFD 194

Query: 571 RFLWH 575
             L  
Sbjct: 195 WLLRK 199


>gi|317180581|dbj|BAJ58367.1| osmoprotection protein [Helicobacter pylori F32]
          Length = 553

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 76/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L          VAI +    + Y++  F +   +Y I L       V +   +  +  
Sbjct: 17  WLLHSIDAATQHLVAIALKISVVKYLIKEF-HDRFIYFIDLLAQHFIIVALSGFLVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G LI+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSGFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|331663626|ref|ZP_08364536.1| putative transport system permease protein [Escherichia coli TA143]
 gi|331059425|gb|EGI31402.1| putative transport system permease protein [Escherichia coli TA143]
          Length = 385

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LVQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV     +  +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALVQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|301021104|ref|ZP_07185145.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300398285|gb|EFJ81823.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 385

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +    A   +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGALNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|218705659|ref|YP_002413178.1| putative ABC transporter permease [Escherichia coli UMN026]
 gi|293405598|ref|ZP_06649590.1| ABC transporter [Escherichia coli FVEC1412]
 gi|298381281|ref|ZP_06990880.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300901252|ref|ZP_07119353.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|218432756|emb|CAR13650.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia coli UMN026]
 gi|291427806|gb|EFF00833.1| ABC transporter [Escherichia coli FVEC1412]
 gi|298278723|gb|EFI20237.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300355326|gb|EFJ71196.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 385

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +    A   +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGALNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|288960740|ref|YP_003451080.1| osmoprotectant transport system permease protein [Azospirillum sp.
           B510]
 gi|288913048|dbj|BAI74536.1| osmoprotectant transport system permease protein [Azospirillum sp.
           B510]
          Length = 399

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 93/239 (38%), Gaps = 13/239 (5%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA-SRTTLRMLSAMVISLLFTFV 85
           L +G     L  +Q ++   D + I+    +   L   A  R    + +A+V +LL    
Sbjct: 148 LAVGAAVAGLVALQLSSGHLDQLSILKEYANRRELFADAVLRHAALVATALVPTLLIGVP 207

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP-----GKVIGAELAAIF 140
               A +   +G  + P+L+++Q++P +      +     L       G      L A+ 
Sbjct: 208 LGVAAQRLEAVGRAVFPLLNVVQTVPSIALFGLLMAPLAALGALLPGMGISGVGPLPAVI 267

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+    +  +  +    L  +P  + E +R   L+  Q F  + +P ++P  +  + +++
Sbjct: 268 ALTLYSLLPIVRNTVVGLDGVPDPVREAARGMGLTPRQIFLRVELPLALPVFLSGLRITV 327

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                    + +I  G       G+G+ +   +    L  +L   + ++ +    D LL
Sbjct: 328 VQAVGLAAVAALIGAG-------GLGAIMFQGLFANALDLVLLGAVPVILMAVAADALL 379



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++   +I +P+G+       +   + P   ++   P+   F L+++ ++       
Sbjct: 194 VATALVPTLLIGVPLGVAAQRLEAVGRAVFPLLNVVQTVPSIALFGLLMAPLAALGALLP 253

Query: 450 ---------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    L   + +   +   I+ N + G    P+  +E A    +T  + +  + LP
Sbjct: 254 GMGISGVGPLPAVIALTLYSLLPIVRNTVVGLDGVPDPVREAARGMGLTPRQIFLRVELP 313

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P +++G       A   + V+ +   G       GLGA + +     +   V+LG +
Sbjct: 314 LALPVFLSGLRITVVQAVGLAAVAALIGAG-------GLGAIMFQGLFANALDLVLLGAV 366

Query: 561 IMCCFVLALNRFL 573
            +    +A +  L
Sbjct: 367 PVILMAVAADALL 379


>gi|194289016|ref|YP_002004923.1| glycine betaine/carnitine/choline transporter inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|193222851|emb|CAQ68854.1| putative glycine betaine/carnitine/choline transport system inner
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 216

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L +        + SA+ +++L       L  + R L   L+ +  I+ ++P +   
Sbjct: 10  SWPTLLKLTGEHLALVGSAVGLAILIGVPLGILITRFRALATPLLALATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F            + A+ A+F   +  +  + Y +L N+   ++E  R   ++ 
Sbjct: 70  GLMIPIFARFGHAL---GYVPAVTAVFLYSLLPIMRNTYTALANVDPGIQEAGRGIGMTT 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++         + +I  G       G+G  I  AI + 
Sbjct: 127 WQRMRLVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  +    + +  +  + D  L
Sbjct: 180 NMSKLAVGAVLVSLLAIVADAFL 202



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ L    +  V   + +A +I +P+GI I     +++ +   A ++   P+   F 
Sbjct: 11  WPTLLKLTGEHLALVGSAVGLAILIGVPLGILITRFRALATPLLALATIVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   + +      +     +   +   I+ N     +      +E      +T W+  
Sbjct: 71  LMIPIFARFGHALGYVPAVTAVFLYSLLPIMRNTYTALANVDPGIQEAGRGIGMTTWQRM 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA       + ++ +   G       GLG  I ++  + +  +
Sbjct: 131 RLVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQSNMSK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           + +G +++    +  + FL
Sbjct: 184 LAVGAVLVSLLAIVADAFL 202


>gi|16764839|ref|NP_460454.1| transport system permease component [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62180081|ref|YP_216498.1| ABC transporter permease [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167550059|ref|ZP_02343817.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168235577|ref|ZP_02660635.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168241018|ref|ZP_02665950.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194445475|ref|YP_002040743.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194448856|ref|YP_002045532.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194734901|ref|YP_002114510.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197249424|ref|YP_002146549.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|198244063|ref|YP_002215643.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|207857005|ref|YP_002243656.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224583998|ref|YP_002637796.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911726|ref|ZP_04655563.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16420014|gb|AAL20413.1| ABC-type transport system protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62127714|gb|AAX65417.1| ABC-type transport systems, permease components [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|194404138|gb|ACF64360.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194407160|gb|ACF67379.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194710403|gb|ACF89624.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197213127|gb|ACH50524.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197291105|gb|EDY30458.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197938579|gb|ACH75912.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205324946|gb|EDZ12785.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205339704|gb|EDZ26468.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|206708808|emb|CAR33136.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224468525|gb|ACN46355.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261246695|emb|CBG24505.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993393|gb|ACY88278.1| putative transport system permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301158024|emb|CBW17519.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912477|dbj|BAJ36451.1| ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224112|gb|EFX49175.1| Putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322616112|gb|EFY13028.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620561|gb|EFY17423.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622962|gb|EFY19804.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628730|gb|EFY25515.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631441|gb|EFY28199.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322638776|gb|EFY35471.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641059|gb|EFY37703.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646576|gb|EFY43084.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649058|gb|EFY45499.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654574|gb|EFY50895.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658659|gb|EFY54917.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322665182|gb|EFY61370.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667926|gb|EFY64086.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322671662|gb|EFY67783.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677291|gb|EFY73355.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680045|gb|EFY76084.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322685525|gb|EFY81521.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322714553|gb|EFZ06124.1| putative transport system permease component [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323129763|gb|ADX17193.1| putative transport system permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323191890|gb|EFZ77137.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323200042|gb|EFZ85130.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323203795|gb|EFZ88815.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323205661|gb|EFZ90624.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212864|gb|EFZ97671.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217331|gb|EGA02051.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223621|gb|EGA07934.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323232206|gb|EGA16312.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234377|gb|EGA18464.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237828|gb|EGA21887.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242608|gb|EGA26629.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249633|gb|EGA33544.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252858|gb|EGA36693.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255980|gb|EGA39720.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261006|gb|EGA44602.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266690|gb|EGA50177.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272243|gb|EGA55654.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326623389|gb|EGE29734.1| putative transport system permease component [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332988376|gb|AEF07359.1| putative transport system permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 236

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|225568127|ref|ZP_03777152.1| hypothetical protein CLOHYLEM_04200 [Clostridium hylemonae DSM
           15053]
 gi|225163080|gb|EEG75699.1| hypothetical protein CLOHYLEM_04200 [Clostridium hylemonae DSM
           15053]
          Length = 265

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 78/196 (39%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  ++  ++   I I + + + F P +S  + P+  +L + P +   PL+
Sbjct: 69  SIFLHIGVTLYETILSFVLVIAISILMAVALWFSPKLSEILDPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+    +    +  ++  + H + +     +
Sbjct: 129 IVWLGANTTTIIVAGMSVAIFGS----ILNLYTSFTTVDPEKIKLIYTLHGSKFHALTKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++      G      I+ E  +         GLG  I  +++      +++
Sbjct: 185 VVPSSIPAIISTMKVNIGLCLVGVIIGEFLAARD------GLGYLIIYASQTFKLDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L   +
Sbjct: 239 SIVLLCIMAMGLYSLI 254



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + V+ +  + + A     S +L  +L P L ++ S+P        +V+ 
Sbjct: 73  HIGVTLYETILSFVLVIAISILMAVALWFSPKLSEILDPYLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y S   +  +  ++  +   S +     +
Sbjct: 133 GANTTTIIVAGMSVAIFGSI--------LNLYTSFTTVDPEKIKLIYTLHGSKFHALTKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP S+P ++  M +++      V+  E +   D      G+G  I  A +   L  +L 
Sbjct: 185 VVPSSIPAIISTMKVNIGLCLVGVIIGEFLAARD------GLGYLIIYASQTFKLDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +      L+
Sbjct: 239 SIVLLCIMAMGLYSLI 254


>gi|254975496|ref|ZP_05271968.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
 gi|255092884|ref|ZP_05322362.1| ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255101030|ref|ZP_05330007.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
 gi|255306894|ref|ZP_05351065.1| ABC transporter, permease protein [Clostridium difficile ATCC
           43255]
 gi|255314625|ref|ZP_05356208.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
 gi|255517299|ref|ZP_05384975.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
 gi|255650405|ref|ZP_05397307.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
 gi|260683518|ref|YP_003214803.1| ABC transporter permease [Clostridium difficile CD196]
 gi|260687178|ref|YP_003218312.1| ABC transporter permease [Clostridium difficile R20291]
 gi|306520385|ref|ZP_07406732.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58]
 gi|260209681|emb|CBA63406.1| ABC transporter, permease protein [Clostridium difficile CD196]
 gi|260213195|emb|CBE04671.1| ABC transporter, permease protein [Clostridium difficile R20291]
          Length = 266

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+++  ++  + +      + P DI ++         L ++   +    +  +VI  
Sbjct: 32  LIGFIVIWELLADLNVINTFLFSKPSDIYNLFIQYAFSGQLFKHIGISVYETVLGLVIGT 91

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   + A     S +L  +L P L ++ ++P        +V+      G V+ A   ++ 
Sbjct: 92  VLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPIIIVWVGAGIEGIVVTAVTISVV 151

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       S Y    NI  +  ++ +SF  +  Q  + L +P +   L+    +++
Sbjct: 152 V--------TILSAYNYFMNIDEEKIKMLKSFGATKSQILFKLILPANTGNLINLTKINI 203

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
              W  V+  E +V         GIG  I    +   L  ++  +  +  
Sbjct: 204 GMAWVGVIVGEFLV------SRYGIGYLIVYGSQVFKLDLVMMGVFVLAI 247



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++  V+ ++I +++ I V I + +   +S  + PF  +L A P     P+
Sbjct: 70  GQLFKHIGISVYETVLGLVIGTVLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V          + +  +  +    + +          +  ++  SF  T  +    
Sbjct: 130 IIVWVGAG----IEGIVVTAVTISVVVTILSAYNYFMNIDEEKIKMLKSFGATKSQILFK 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP      +       G AW   IV E        +   G+G  I   ++      V+
Sbjct: 186 LILPANTGNLINLTKINIGMAWVGVIVGEFL------VSRYGIGYLIVYGSQVFKLDLVM 239

Query: 557 LGVLIMCC 564
           +GV ++  
Sbjct: 240 MGVFVLAI 247


>gi|15894678|ref|NP_348027.1| ABC transporter, permease component [Clostridium acetobutylicum
           ATCC 824]
 gi|15024337|gb|AAK79367.1|AE007651_10 ABC transporter, permease component [Clostridium acetobutylicum
           ATCC 824]
 gi|325508816|gb|ADZ20452.1| ABC transporter, permease component [Clostridium acetobutylicum EA
           2018]
          Length = 250

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P   +    P     PL +    +  L       ++++    + I+ ++I G  
Sbjct: 90  VRKALYPIIVISQTIPTIAIAPLFIIWFGFGPL----PKIIVVVITCFFPIVISLIDGFE 145

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               D+  +  S   +  + + ++ LP       +G   AC     A+++ E        
Sbjct: 146 KIDKDYINLFRSMKASRIQIFYHLKLPSAMVNLFSGIKIACTYMIMAAVIGEWLGGDG-- 203

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLG 558
               G+G Y+  +    +  +V   
Sbjct: 204 ----GIGVYMVRAKNAYALDKVFAS 224



 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 94/226 (41%), Gaps = 15/226 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +  L+A +++  +I      I E  +P      + +  +  ++ Q    T    L    
Sbjct: 13  PVAALIAVIILWQLIVDF-RKIPEYVIPSPKDICLTLISEFGTIMQNTKVTIYESLVGFF 71

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I+++F F+ A +    + +   L PI+ I Q+IP +      +++F            L 
Sbjct: 72  IAIIFAFILAIIMDSFQIVRKALYPIIVISQTIPTIAIAPLFIIWFG--------FGPLP 123

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I  +  +  + +  S+      I +D   + RS + S  Q F++L +P +M  L   + 
Sbjct: 124 KIIVVVITCFFPIVISLIDGFEKIDKDYINLFRSMKASRIQIFYHLKLPSAMVNLFSGIK 183

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           ++ +   + ++A+   V+G+ +    GIG Y+  A     L  +  
Sbjct: 184 IACT---YMIMAA---VIGEWLGGDGGIGVYMVRAKNAYALDKVFA 223


>gi|33591676|ref|NP_879320.1| ABC transporter, permease component [Bordetella pertussis Tohama I]
 gi|33571319|emb|CAE44793.1| ABC transporter, permease component [Bordetella pertussis Tohama I]
 gi|332381092|gb|AEE65939.1| ABC transporter, permease component [Bordetella pertussis CS]
          Length = 277

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+  +   T    L  + + +   FV     ++SR L  V  P +    S+P + F+ 
Sbjct: 74  PQSVWPHLWLTLQATLLGLAVGVGSGFVVGLALSRSRMLADVFNPFIVAFNSMPRIAFVP 133

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   S  
Sbjct: 134 LITMFFELGMASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGGSPR 185

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P +       +  ++S     VV +E +          G+G  +  A+   +
Sbjct: 186 QILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALATLN 239

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
              +  A+  +  V  +       L R ++ W+ +FR
Sbjct: 240 ATDMFAAVTLLSVVGIVLVYCVTWLERRLLHWAPEFR 276



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 80/276 (28%), Gaps = 17/276 (6%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           L + V++  R                    RV + +    F            Q +   +
Sbjct: 11  LRDGVRRRLRVTAWQLLILALILGAWEGLTRVPWFVQNTIFDPFFISQPSRVAQRLWQWM 70

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                    ++     +T+   ++ + +       VG+ +     ++    PF     + 
Sbjct: 71  QPGPQSVWPHLW----LTLQATLLGLAVGVGSGFVVGLALSRSRMLADVFNPFIVAFNSM 126

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P   F PL+         +  +    ++ F       FN   G  +   +  +   +   
Sbjct: 127 PRIAFVPLITMFFELGMASKVVTSWFVVFFLVF----FNTYKGGRSVERELVDFCRTLGG 182

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +    + +P    +       A   A    +++E          TTG+G  +  +  
Sbjct: 183 SPRQILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVG------STTGMGYLMITALA 236

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL-W--HPLYLYG 581
             +  ++   V ++    + L   + W    L  + 
Sbjct: 237 TLNATDMFAAVTLLSVVGIVLVYCVTWLERRLLHWA 272


>gi|257878855|ref|ZP_05658508.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257890713|ref|ZP_05670366.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|293560275|ref|ZP_06676772.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1162]
 gi|257813083|gb|EEV41841.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257827073|gb|EEV53699.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|291605725|gb|EFF35162.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecium E1162]
          Length = 220

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 26  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 86  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  +I+ A 
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATEGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 191 ALPTALMAIITDWLL 205



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 20  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 80  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 135

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 136 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATEGTSIIL 188

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 189 AGALPTALMAIITDWLLGILERRL 212


>gi|110004294|emb|CAK98632.1| putative phosphate transporter abc transporter protein [Spiroplasma
           citri]
          Length = 704

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 82/544 (15%), Positives = 173/544 (31%), Gaps = 54/544 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGFLTFTV 120
           R  +     ++I+LLF       ++       S R+   ++ I+ ++  IP + F  F +
Sbjct: 96  RIIIATFFVLLIALLFAIPLTIFSSLYISEYLSPRIKRKVIGIIQLLAGIPSVVFGLFAL 155

Query: 121 VYFMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                ++           L     +    +  M      +L N+P      S +  LS  
Sbjct: 156 AILGPIFMLMGAPSTSNLLVTSITLAFMGLPIMISLSINALENVPDSYRFGSLALGLSKT 215

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS--YIALAIKE 235
              + + +  +   ++  +MM ++      +A  MI          G G   +I  +I  
Sbjct: 216 HTTYRIVLRSAWFKIITAIMMGVARIIGETMAVMMIAGNAPDGLKLGNGFINFIFSSIAT 275

Query: 236 Q----------DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV 285
                      +   +  + L  +G++                 F +     I+   S  
Sbjct: 276 LASTIGLEMLENSGPMHESALYAIGLVL----------------FIIVCIINIFIISSQA 319

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
            +  ++    R          S  +N + KL            +    L     +S  + 
Sbjct: 320 FHNRKRNYHSRKTTKGLRLSKSYNANKINKLFYEHIEKTRGLKKFKDGLGMFLLISSTVI 379

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-WIPV 404
           +  F +V    I   W+ +  +V         +    G ++ F V +L++I SII  IP+
Sbjct: 380 VVSFTLVILATI--IWKGLFGMVWSDLISTSTFDGGAGILSTFLVTLLLVICSIIFAIPL 437

Query: 405 GIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLL 455
            + +              +  ++    +L++ P+ ++    +   +   HL  ++  S L
Sbjct: 438 SLMVAIYLNEYARQNSIFAKVVRFAIDVLSSTPSIIYGTFGLAFFIGVCHLPLSILSSGL 497

Query: 456 MIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +      I+   I    S   N  +  + +           ++LP   P  +T  I A 
Sbjct: 498 TLTIVILPIMIRSIEDALSGVENSLRHASLALGANKTATTLKVVLPNAMPGIITAIILAI 557

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF----PEVVLGVLIMCCFVLALN 570
           G     S    +     + L   G  +  A  T +             + IM     A+ 
Sbjct: 558 GRVIGESAPVYLTLGTAVRLPIAGFMSPGASMTTQILMLSKEGATAGAMRIMFELAFAIM 617

Query: 571 RFLW 574
             +W
Sbjct: 618 VLIW 621



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +F L++  +++    +++           +V    I+            T L  L  ++
Sbjct: 369 GMFLLISSTVIVVSFTLVILATIIWKGLFGMVWSDLISTSTFDGGAGILSTFLVTLLLVI 428

Query: 78  ISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            S++F    + + A        ++     V+   +D++ S P + + TF + +F+ +   
Sbjct: 429 CSIIFAIPLSLMVAIYLNEYARQNSIFAKVVRFAIDVLSSTPSIIYGTFGLAFFIGV--C 486

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +  + L++   +    +  M  S+  +L  +   L   S +   +       + +P +M
Sbjct: 487 HLPLSILSSGLTLTIVILPIMIRSIEDALSGVENSLRHASLALGANKTATTLKVVLPNAM 546

Query: 190 PGLVWNMMMSMS 201
           PG++  +++++ 
Sbjct: 547 PGIITAIILAIG 558


>gi|261886430|ref|ZP_06010469.1| taurine transport system permease protein TauC [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 125

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 6/113 (5%)

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + +L          P +   V+ +F  + W+    +I P  F   ++G   A   AW  
Sbjct: 2   FFPVLLLASKAVQDVPKELIIVSKNFGASKWQVLSGVIFPSSFLMLISGLKLAASMAWIN 61

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +V E+          TGLG  I ++  +     V+  + ++      +N+  
Sbjct: 62  LVVGEMLG------AQTGLGYLIIDARNQLRIDIVLAVICVIGVVGWVINQLF 108



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + +     +++ ++P++L  VS++F  S WQ    +  P S   L+  + ++ S  W 
Sbjct: 1   MFFPVLLLASKAVQDVPKELIIVSKNFGASKWQVLSGVIFPSSFLMLISGLKLAASMAWI 60

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +V  EM+          G+G  I  A  +  +  +L  +  +  V ++ +QL 
Sbjct: 61  NLVVGEMLGAQT------GLGYLIIDARNQLRIDIVLAVICVIGVVGWVINQLF 108


>gi|297520885|ref|ZP_06939271.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli OP50]
          Length = 375

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 167 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 226

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 227 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 286

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 287 ARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 339

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 340 AIDLVLLGVIPVIVLAVLTDALF 362



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 115 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 174

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 175 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 232

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G R + +
Sbjct: 233 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGARRFLH 292

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 293 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 345

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 346 LGVIPVIVLAVLTDALF 362


>gi|298245372|ref|ZP_06969178.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297552853|gb|EFH86718.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 218

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D  S+P   S+    +  +M+ISL+       L ++ R+L + ++  +D++ +IP L  
Sbjct: 13  TDPESIPNLLSQHAFLVGVSMLISLVIAIPLGILVSRYRKLALPVITFMDLLYTIPGLAL 72

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +      +          AI  +       +  +   +L  I   L E +R+  ++
Sbjct: 73  LGVLISITGLSFT--------TAIIPLILYTQLVLIRNTSAALNGIDPLLIETARAMGMN 124

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G Q  + + +P ++P ++  + ++        V    I    +++   G+G  I   I  
Sbjct: 125 GTQLLFRVTLPLALPVIIAGIRIA-------TVTIIGIAALASLVGEGGLGDLIFKNITS 177

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
           +D+ A+L   + +     + D
Sbjct: 178 RDMDAVLAGAILLSLFAIVTD 198



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 11/201 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   D   +  L     F V V ++I+ +I IP+GI +     ++  +  F  LL   P
Sbjct: 9   NYDLTDPESIPNLLSQHAFLVGVSMLISLVIAIPLGILVSRYRKLALPVITFMDLLYTIP 68

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 L+   +S   L+    +  L+++ TQ  ++ N  A  +       E A +  + 
Sbjct: 69  GLA---LLGVLISITGLSFTTAIIPLILY-TQLVLIRNTSAALNGIDPLLIETARAMGMN 124

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
           G +    + LP   P  + G   A       + ++ +   G       GLG  I ++   
Sbjct: 125 GTQLLFRVTLPLALPVIIAGIRIATVTIIGIAALASLVGEG-------GLGDLIFKNITS 177

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
                V+ G +++  F +  +
Sbjct: 178 RDMDAVLAGAILLSLFAIVTD 198


>gi|167031928|ref|YP_001667159.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
 gi|166858416|gb|ABY96823.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida GB-1]
          Length = 217

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 10/194 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +    +  A+ +++L       L  +   L   L     ++ +IP + 
Sbjct: 9   HLDWAQVLQLTWQHITLVGIAVSLAILVGVPLGILMTRFPTLAGPLQASATVLLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      L AI A+F   +  +  + Y +L N+   + E +R   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPILRNTYLALTNVEPGIREAARGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTSIS 178

Query: 235 EQDLLAILYAMLTM 248
             D+  +L   + +
Sbjct: 179 RSDMSMLLVGAVLV 192



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F++ D   V+ L    +  V + + +A ++ +P+GI +   P ++  +Q  A +L 
Sbjct: 3   LIDTFSHLDWAQVLQLTWQHITLVGIAVSLAILVGVPLGILMTRFPTLAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   IL N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPILRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           S  +     +++G +++ 
Sbjct: 176 SISRSDMSMLLVGAVLVS 193


>gi|15594562|ref|NP_212351.1| phosphate ABC transporter, permease protein (pstA) [Borrelia
           burgdorferi B31]
 gi|2688113|gb|AAC66607.1| phosphate ABC transporter, permease protein (pstA) [Borrelia
           burgdorferi B31]
          Length = 328

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPIL 104
           I+ I   +     +      T   +L    IS+        + A+   S+    +L   +
Sbjct: 101 ILSIPRDSGAYGGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSV 160

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           DI+ SIP + F  F +++F+ +    ++   + +   I       +  +  ++   IP+ 
Sbjct: 161 DILSSIPAIIFGLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKS 216

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            +  S +   +  +    + VP ++PG++  +++++              +G+T + L  
Sbjct: 217 YKYASFALGANKTETIIKVMVPAAIPGILTGIVLAIGRA-----------LGETAVLLFT 265

Query: 225 IGSYIALAIKEQDLLAILYAMLTML 249
           +G+ + LA    +    L   L ML
Sbjct: 266 MGTNLGLATNLNEPSRTLTVHLLML 290



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 78/219 (35%), Gaps = 20/219 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++   I+  I I  GI +            +     +L++ PA +F
Sbjct: 112 GGISYLILNTFYVILLTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIF 171

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V  +    L+  +  SL+++      I+          P  +K  + +    
Sbjct: 172 GLFGLIFFVPILGIGILSGAITSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGAN 227

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG------LGAYI 543
                  +++P   P  +TG + A G A   + V       ++ L T        L  ++
Sbjct: 228 KTETIIKVMVPAAIPGILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHL 287

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYL 579
               ++G   +      I+   VL +N   +FL + LY 
Sbjct: 288 LMLFQEGHLDKGFGTASILVIMVLIINLTSKFLINKLYR 326


>gi|325275907|ref|ZP_08141754.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
 gi|324098957|gb|EGB96956.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas sp. TJI-51]
          Length = 217

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 74/194 (38%), Gaps = 10/194 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +  + +  A+ +++L       L  +   L   L     ++ +IP + 
Sbjct: 9   HLDWAQVLNLTGQHIMLVGVAVGLAILVGVPLGILMTRFPALAGPLQASATVLLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +  +     G      L AI A+F   +  +  + Y +L N+   + E +R   +
Sbjct: 69  LFGLLLPLYSKFGQGLGP---LPAITAVFLYSLLPIMRNTYLALTNVEPGIREAARGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTSIS 178

Query: 235 EQDLLAILYAMLTM 248
             D+  +L   + +
Sbjct: 179 RSDMSMLLVGAVLV 192



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F + D   V+ L    +  V V + +A ++ +P+GI +   P ++  +Q  A +L 
Sbjct: 3   LIDTFNHLDWAQVLNLTGQHIMLVGVAVGLAILVGVPLGILMTRFPALAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   I+ N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPLYSKFGQGLGPLPAITAVFLYSLLPIMRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           S  +     +++G +++ 
Sbjct: 176 SISRSDMSMLLVGAVLVS 193


>gi|314935637|ref|ZP_07842989.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|313656202|gb|EFS19942.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 211

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +K++R   V++ I  ++Q++P L  L   +  F           +  AI 
Sbjct: 32  VVAVPIGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ E   S  ++  Q    + +P ++P ++  + ++ 
Sbjct: 84  ALFIYVLLPILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLIISGIRLAS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  I  G       G+G  +   +   +   I+ A + +  +  + D LL
Sbjct: 144 VYVISWATLASYIGAG-------GLGDLVFNGLTLYEPPMIISATILVTCLALIVDFLL 195



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 71/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      ++ +   A +L   P      L++        
Sbjct: 20  FYISIISLLIAIVVAVPIGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  E  +S  +T  +  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   A     + + ++     G       GLG  +         P ++   +++ C  
Sbjct: 136 ISGIRLASVYVISWATLASYIGAG-------GLGDLVFNGLTLYEPPMIISATILVTCLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDFLL 195


>gi|291531179|emb|CBK96764.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Eubacterium siraeum 70/3]
          Length = 247

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 98/257 (38%), Gaps = 18/257 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           ++  P +   +  +++  +I + ++       P  I   +   L       +   T L  
Sbjct: 2   KKHLPAVLTGIGLLILWQVIAMCINAAYILPSPTQIAVKI-WELREPLFTVHTPATMLVT 60

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++IS++     A +  +   +   L P++   Q+IP+       V++       KV+
Sbjct: 61  LIGLLISVVLGVGLAVVMERFECVERALYPVIVTTQTIPVTAIAPLFVLWLGYGIWSKVL 120

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F         +T S++  L +  R+ EE+ R+  +S    F+ L  P ++P  
Sbjct: 121 VAVLITFF--------PITISVHDGLKSAKRENEELLRTMGMSDTAIFFKLKFPAALPSF 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG-- 250
              + M++              +G+ +    G+G +    + + D   +   ++ +    
Sbjct: 173 FSAIKMAIPLSIL------GAAMGEWLGAQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCA 226

Query: 251 -VIFLYDQLLFRPMIVW 266
            ++      + R +I W
Sbjct: 227 MLVVAVISAIERKLITW 243



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 76/244 (31%), Gaps = 13/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L I W  +   +       S   I                  TM   ++ ++I+ +
Sbjct: 10  TGIGLLILWQVIAMCINAAYILPSPTQIAVKIWELREPLFTVHTPATMLVTLIGLLISVV 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + + + +     +   + P        P     PL V  + Y          L+ +  
Sbjct: 70  LGVGLAVVMERFECVERALYPVIVTTQTIPVTAIAPLFVLWLGYG----IWSKVLVAVLI 125

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I  +V  G  +   + +E+  +  ++    +  +  P   P + +    A   +  
Sbjct: 126 TFFPITISVHDGLKSAKRENEELLRTMGMSDTAIFFKLKFPAALPSFFSAIKMAIPLSIL 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC---FVLALNRFLWHP 576
            + + E           +GLG +      +     V   V+++      V+A+   +   
Sbjct: 186 GAAMGEWLG------AQSGLGYFSKRMMTQLDGAGVFAPVVVLAVCAMLVVAVISAIERK 239

Query: 577 LYLY 580
           L  +
Sbjct: 240 LITW 243


>gi|118592962|ref|ZP_01550350.1| probable nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Stappia aggregata IAM 12614]
 gi|118434496|gb|EAV41149.1| probable nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Stappia aggregata IAM 12614]
          Length = 306

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 97/288 (33%), Gaps = 25/288 (8%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-------- 367
             R         P       S +R   +  +   CV+    +   WQ +  +        
Sbjct: 24  PSRKRRSSAVKLPTKESAAASKRRERTLTVLVPICVIA--TLIALWQIMVTVNDIPHYIL 81

Query: 368 -----VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                V      D   ++    +T    +  + +A I    + I +     I + + P  
Sbjct: 82  PGPGLVVQSLLSDWHVLLPALWVTTKITLASLALALIGGGGMAILLVQSRWIETALYPIT 141

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +L           +   +  Y  +    L +       + IL N++ G  +  ++   +
Sbjct: 142 VILQ----VTPIIAIAPLILIYAPSTQAALLICAFVVAFFPILSNMVQGLKSVDHNLLNL 197

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
              +  + W+   Y+ LP   PY++TG     G A  A++V+E A+          L   
Sbjct: 198 FELYGASRWQTLIYLKLPASLPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSG--LAFR 255

Query: 543 IAESTEKGSFPEVVLGVLI---MCCFVLALNRFL-WHPLYLYGTRCLR 586
           + ES  + +   +   + +   +   + AL  F+ W  L+ +    L+
Sbjct: 256 LLESQFRLNISRLFAALFLLASLGVLIFALTSFISWWTLHRWHESSLK 303



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 87/234 (37%), Gaps = 10/234 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A ++ +  I + ++ I    +P   + +  +  D H L      TT   L+++ ++L+
Sbjct: 59  VIATLIALWQIMVTVNDIPHYILPGPGLVVQSLLSDWHVLLPALWVTTKITLASLALALI 118

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A L  +SR +   L PI  I+Q           ++    L        + A +  
Sbjct: 119 GGGGMAILLVQSRWIETALYPITVILQ--------VTPIIAIAPLILIYAPSTQAALLIC 170

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F    + +  +M Q L ++  +L  +   +  S WQ   YL +P S+P  +  + +   
Sbjct: 171 AFVVAFFPILSNMVQGLKSVDHNLLNLFELYGASRWQTLIYLKLPASLPYFMTGLRIGGG 230

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E             +   +  +    ++  +  A+  +  +  L 
Sbjct: 231 LALIAAVVAEFAAGSAGAGSG--LAFRLLESQFRLNISRLFAALFLLASLGVLI 282


>gi|317124236|ref|YP_004098348.1| binding-protein-dependent transporters inner membrane component
           [Intrasporangium calvum DSM 43043]
 gi|315588324|gb|ADU47621.1| binding-protein-dependent transport systems inner membrane
           component [Intrasporangium calvum DSM 43043]
          Length = 281

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +   +I  +  + +G   G      + + PF       P     P+ ++   +  
Sbjct: 92  TLQETLYGFLIGGLAGLVIGALTGTFALFRTALWPFVVAFQNTPRVALAPVFLTWFGFGM 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  +  +++      + ++ N +AG ++  ++ + +  ++  T  + +  + LP   P 
Sbjct: 152 TSKVVMAAVI----CFFPVVINTVAGIASVDDNARTLFRTYGATTPQTFFRLTLPTAAPV 207

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G  TA   A   +IV E          + GLG  + E   +    +    V+ +   
Sbjct: 208 AFAGIKTALTLALLGAIVGEFVG------ASEGLGVLVKEFNFQLEVAKGFAVVIFLALI 261

Query: 566 VLALNRFLWHPLYLYGTRCL 585
            LAL   +         + L
Sbjct: 262 GLALYGLI-----ELAEKRL 276



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 84/270 (31%), Gaps = 26/270 (9%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---- 61
            +P   SR        L   VLV G+    L        P  +         +  +    
Sbjct: 27  RMPALSSRAA---KIGLPLAVLVAGLAGWELSVQSGLVNPITVPAASDTFAAMAEIMQTS 83

Query: 62  --PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
              +   +T    L   +I  L   V   L          L P +   Q+ P +      
Sbjct: 84  YFWESTWQTLQETLYGFLIGGLAGLVIGALTGTFALFRTALWPFVVAFQNTPRVALAPVF 143

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F      KV+ A +   F         +  +    + ++  +   + R++  +  Q 
Sbjct: 144 LTWFGFGMTSKVVMAAVICFF--------PVVINTVAGIASVDDNARTLFRTYGATTPQT 195

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+ L +P + P     +  +++      +  E +   +      G+G  +     + ++ 
Sbjct: 196 FFRLTLPTAAPVAFAGIKTALTLALLGAIVGEFVGASE------GLGVLVKEFNFQLEVA 249

Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVW 266
                ++ +  +      L+    + +I W
Sbjct: 250 KGFAVVIFLALIGLALYGLIELAEKRLITW 279


>gi|77457031|ref|YP_346536.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77381034|gb|ABA72547.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 217

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 77/205 (37%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ +++L       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWQQVMHLTWQHITLVGIAVSLAILIGVPLGILMTRFPSLAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E +R   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   L +  +    D +L
Sbjct: 179 RSDMSMLIVGALLVSLLAIFADLIL 203



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +Q V+++ W        V + + +A +I +P+GI +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWQQVMHLTWQHITL---VGIAVSLAILIGVPLGILMTRFPSLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G L++    +  +  L
Sbjct: 177 ISRSDMSMLIVGALLVSLLAIFADLIL 203


>gi|16264561|ref|NP_437353.1| putative choline uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307307592|ref|ZP_07587324.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307319396|ref|ZP_07598824.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15140699|emb|CAC49213.1| putative choline uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|306895018|gb|EFN25776.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306901718|gb|EFN32319.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 245

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 19/247 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
             PN+F L    +++    ++     E  +   + +  P   +  SL          +  
Sbjct: 3   TLPNLFRLTVLAVLLAF--LVQPAWFEPLLKPLVQENAPAVYNQGSLFWLTVLHLRTVFV 60

Query: 75  AMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           A V + +     A +  +        +   +++I Q+ P +  L   V  +         
Sbjct: 61  ATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYG-------- 112

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   + A+F   +  +  +    L  +P  + E +R   ++G Q+ + + +P ++P +
Sbjct: 113 FGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVI 172

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +S       VV S       + +    +G  I   ++  +L  +L   L +  + 
Sbjct: 173 LTGIRLS-------VVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALA 225

Query: 253 FLYDQLL 259
            L    L
Sbjct: 226 VLIHDAL 232



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 17/197 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF----AQLLAAFPANV 432
             + WL  + +  V V  + A+I+ + + I +       ++  P       +   FP   
Sbjct: 45  GSLFWLTVLHLRTVFVATVAATIVAVSLAIIV--TRKAGAEFLPLSRSLVNIGQTFPPVA 102

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G +  P    E A    +TG +
Sbjct: 103 VLALAVPIYGFGEKPTLIALFLYGLL----PIFENALTGLTTLPPTVMEAARGAGMTGRQ 158

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I LP   P  +TG   +        ++S   +     +    LG  I    +  + 
Sbjct: 159 RLFRIELPLALPVILTGIRLS-------VVISLATATIGSTVAARTLGEVIIAGLQSNNL 211

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G LI+    + +
Sbjct: 212 AFVLQGGLIVGALAVLI 228


>gi|196043847|ref|ZP_03111084.1| ABC transporter, permease protein [Bacillus cereus 03BB108]
 gi|225866777|ref|YP_002752155.1| ABC transporter, permease protein [Bacillus cereus 03BB102]
 gi|196025183|gb|EDX63853.1| ABC transporter, permease protein [Bacillus cereus 03BB108]
 gi|225788073|gb|ACO28290.1| ABC transporter, permease protein [Bacillus cereus 03BB102]
          Length = 268

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G AW   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLAWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLWIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLAWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|91976584|ref|YP_569243.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91683040|gb|ABE39342.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 265

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 19/215 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           F +     +     IT++  ++  +I S+  + VG W   +P +++   P+ ++L A P 
Sbjct: 51  FAWFASGLIWKHLLITLWESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYVKMLNALPR 110

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V  P+    +     +       L+ F   + +      G         + A    ++ 
Sbjct: 111 VVLAPIFTLWLGLGIWSKVALGVTLVFFVVFFNVY----QGVKETSGTLVDNARMLGMSE 166

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +  R++  P    +  +   TA G A   ++V E            GLG  I ++    
Sbjct: 167 RQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLG------AAAGLGYLIQQAEGTF 220

Query: 551 SFPEVVLGVLIMCCFVLALN---------RFLWHP 576
               V  G+ ++  FV+ ++           +W P
Sbjct: 221 DVAGVFAGMFVLSVFVIVIDLAVSLVERRLLVWRP 255



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+   V        + ++   T    L A VI  +   +     A+  R+  V  P +
Sbjct: 43  PVDVAKQVFAWFASGLIWKHLLITLWESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYV 102

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++ ++P +       ++              + +    T   + + F++YQ +      
Sbjct: 103 KMLNALPRVVLAPIFTLWLGLGI--------WSKVALGVTLVFFVVFFNVYQGVKETSGT 154

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L + +R   +S  Q   ++  P ++  +  ++  ++       V  E +          G
Sbjct: 155 LVDNARMLGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLGAAA------G 208

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269
           +G  I  A    D+  +   M  +   + + D    L+ R ++VW  +
Sbjct: 209 LGYLIQQAEGTFDVAGVFAGMFVLSVFVIVIDLAVSLVERRLLVWRPR 256


>gi|56418848|ref|YP_146166.1| hypothetical protein GK0313 [Geobacillus kaustophilus HTA426]
 gi|56378690|dbj|BAD74598.1| hypothetical protein [Geobacillus kaustophilus HTA426]
          Length = 209

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 15/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L    AM I+++       +  + R+L   ++ I  I+Q+IP L  L F +  F     
Sbjct: 22  VLLSAIAMSIAIVIAVPLGVVLTRYRKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIG-- 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S
Sbjct: 80  ------KLPAIIALTLYALLPILRNTYTGILGVDPTLVDAGRGMGMTSRQILWMVELPLS 133

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +        V +  +    T I   G+G  I   ++  D   IL   +  
Sbjct: 134 LPVIMAGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILAGAIPA 186

Query: 249 LGVIFLYDQLL 259
             +  ++D LL
Sbjct: 187 AMLAIVFDWLL 197



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+G+ +     ++  I   A ++   P+      ++       L   +
Sbjct: 26  AIAMSIAIVIAVPLGVVLTRYRKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIGKLPAII 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  +      IL N   G         +      +T  +    + LP   P  + G 
Sbjct: 86  ALTLYALL----PILRNTYTGILGVDPTLVDAGRGMGMTSRQILWMVELPLSLPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++     G       GLG  I           ++ G +      +  +
Sbjct: 142 RTATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILAGAIPAAMLAIVFD 194

Query: 571 RFLWH 575
             L  
Sbjct: 195 WLLRK 199


>gi|289423714|ref|ZP_06425512.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein
           [Peptostreptococcus anaerobius 653-L]
 gi|289155878|gb|EFD04545.1| glycine betaine/carnitine/choline ABC transporter, glycine
           betaine/carnitine/choline-binding protein
           [Peptostreptococcus anaerobius 653-L]
          Length = 211

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + L          +SRRL  + + I +++Q+IP L  L+  +V    
Sbjct: 20  IRHFLISIYGVLYACLVAIPLGMYITRSRRLSALTIGIANVIQTIPSLALLSILMVAMGL 79

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  +    L NI  +L +V++   ++ +Q    + +
Sbjct: 80  G--------TNTVVATVFLYSLLPILKNTCTGLSNINENLLDVAKGMGMTNFQVMMKVKM 131

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +          +V +  I    T I   G+G  I+  I   D  AI++A 
Sbjct: 132 PLALSVIMGGIR-------NALVLAVGIATIGTFIGAGGLGDIISRGISVSDGSAIIWAG 184

Query: 246 -LTMLGVIFLYDQLL 259
            +    +  ++D  L
Sbjct: 185 TIPTALMAVIFDIAL 199



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 65/188 (34%), Gaps = 12/188 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               +  ++ A ++ IP+G++I     +S+     A ++   P+     +++  +     
Sbjct: 23  FLISIYGVLYACLVAIPLGMYITRSRRLSALTIGIANVIQTIPSLALLSILMVAMGLGTN 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   IL N   G S    +  +VA    +T ++    + +P      
Sbjct: 83  T----VVATVFLYSLLPILKNTCTGLSNINENLLDVAKGMGMTNFQVMMKVKMPLALSVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCCF 565
           + G         NA +++   +     +   GLG  I+          ++  G +     
Sbjct: 139 MGGIR-------NALVLAVGIATIGTFIGAGGLGDIISRGISVSDGSAIIWAGTIPTALM 191

Query: 566 VLALNRFL 573
            +  +  L
Sbjct: 192 AVIFDIAL 199


>gi|186472802|ref|YP_001860144.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184195134|gb|ACC73098.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 271

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +  R+   +V S     V+  +       G  L P + ++  IP L  L    
Sbjct: 71  MWDDTVSSMRRLGIGLVASAAVALVFGIVTGSIPLAGATLSPFITVISMIPPLAVLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       M   + Q    IP +L   +++   S W   
Sbjct: 131 IVFGLD--------ELSKVVLIVIGITPMMIRDLQQRTREIPEELWIKAQTLGASSWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP  +P L+  + +++   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 VRVIVPQLLPRLLIALRLALCSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           IL  +  +  + +L D+ L R +  W+
Sbjct: 237 ILPYVAWITLLAWLIDEAL-RRITQWA 262



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 72/196 (36%), Gaps = 11/196 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M R+ + ++ ++ + +  GI  G  P   + + PF  +++  P     P++        
Sbjct: 78  SMRRLGIGLVASAAVALVFGIVTGSIPLAGATLSPFITVISMIPPLAVLPILFIVFGLDE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      +L++ G    ++ ++       P +    A +   + W     +I+P + P 
Sbjct: 138 LSK----VVLIVIGITPMMIRDLQQRTREIPEELWIKAQTLGASSWTLIVRVIVPQLLPR 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +     A   AW   I +E  +       T GLG  I       +   ++  V  +   
Sbjct: 194 LLIALRLALCSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVAWITLL 247

Query: 566 VLALNRFLWHPLYLYG 581
              ++  L   +  + 
Sbjct: 248 AWLIDEAL-RRITQWA 262


>gi|323968049|gb|EGB63459.1| inner membrane transport system [Escherichia coli M863]
 gi|323977681|gb|EGB72767.1| inner membrane transport system [Escherichia coli TW10509]
 gi|327253257|gb|EGE64911.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli STEC_7v]
          Length = 385

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGVAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +    A   +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGALNDLSLMKEYANRQDVFNDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGVAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|300313757|ref|YP_003777849.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300076542|gb|ADJ65941.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [Herbaspirillum seropedicae SmR1]
          Length = 271

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 78/207 (37%), Gaps = 17/207 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+L  + I+ L   V   +      L     P+L +M  +P L  L    +   
Sbjct: 75  TLASLQRVLLGLGIAALAGLVLGIVNGVFPVLRAGFSPLLTVMSMVPPLAILPILFIVMG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   +  +   IP +L   +++   + W     + 
Sbjct: 135 LD--------ELSKVMLIVIGVTPLLARDLEHTGRAIPAELLIKAQTLGANSWTVVLRVA 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L+ ++ +S+   W F++++E I          G+G  I L  +   +  IL  
Sbjct: 187 LPQMLARLLVSLRLSLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPY 240

Query: 245 MLTMLGVIFLYDQLLF---RPMIVWSN 268
           ++ +  + +L D LL    R    W+ 
Sbjct: 241 VVWITLLAWLMDWLLRAVHRRFFPWAE 267



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 74/202 (36%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ RV++ + IA++  + +GI  G  P + +   P   +++  P     P++   +  
Sbjct: 76  LASLQRVLLGLGIAALAGLVLGIVNGVFPVLRAGFSPLLTVMSMVPPLAILPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++     A P +    A +     W     + LP + 
Sbjct: 136 DELSK----VMLIVIGVTPLLARDLEHTGRAIPAELLIKAQTLGANSWTVVLRVALPQML 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +     + G AW   I +E  S       T GLG  I       +   ++  V+ + 
Sbjct: 192 ARLLVSLRLSLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN---RFLWHPLYLYGT 582
                ++   R +    + +  
Sbjct: 246 LLAWLMDWLLRAVHRRFFPWAE 267


>gi|284172818|ref|YP_003406200.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
 gi|284017578|gb|ADB63527.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 224

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 68/190 (35%), Gaps = 15/190 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +  + +L + + ++        +A + +RL   ++ + ++ Q+IP L  +      F   
Sbjct: 27  QHIILVLVSELAAIAVAVPLGIIAVRYKRLQGAILSMGNVAQTIPTLAVIALAFPIFGLG 86

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +         +A+ A+F   +  +  +    L  +     E ++   ++  +    + +P
Sbjct: 87  F--------SSAVIALFVYALLPILTNTITGLDQVDESTIEAAKGMGMTKGEILRKIQLP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  +   +  S       +V +         I   G+G ++   I   +   IL   +
Sbjct: 139 MALSVIFAGIRTS-------IVINVGTAYLAFFIGGGGLGVWVISGINLFNTPQILAGAI 191

Query: 247 TMLGVIFLYD 256
               +    D
Sbjct: 192 PGALLAITLD 201



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 11/181 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+V  + A  + +P+GI       +   I     +    P      L          +  
Sbjct: 32  VLVSELAAIAVAVPLGIIAVRYKRLQGAILSMGNVAQTIPTLAVIALAFPIFGLGFSSAV 91

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L +  +      IL N I G         E A    +T     R I LP        G
Sbjct: 92  IALFVYALL----PILTNTITGLDQVDESTIEAAKGMGMTKGEILRKIQLPMALSVIFAG 147

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++     G       GLG ++       + P+++ G +      + L
Sbjct: 148 IRTSIVINVGTAYLAFFIGGG-------GLGVWVISGINLFNTPQILAGAIPGALLAITL 200

Query: 570 N 570
           +
Sbjct: 201 D 201


>gi|110680287|ref|YP_683294.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109456403|gb|ABG32608.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 302

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 4/167 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     SR +   ++P     Q+IPIL  
Sbjct: 92  TSKRSLVYHGWVTLSATLLGFAIGTGLGILLAIGIVYSRTMDKSVMPWAITSQTIPILAL 151

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + + +  F    + +   M + L +      ++ R++  S
Sbjct: 152 APMIIVMLGAIGIQGLLPKSVISAYLSF----FPVVVGMVKGLRSPDAMQLDLLRTYSAS 207

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             Q FW L +P S+P L  ++ + +S      +  E+          
Sbjct: 208 PSQGFWKLRLPASVPYLFASLKIGISAALVGAIVGELPTGARAGFGA 254



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 67/174 (38%), Gaps = 5/174 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++   I + + I + I I +   +   + P+A      P     P++
Sbjct: 96  SLVYHGWVTLSATLLGFAIGTGLGILLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMI 155

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  S++  + + + ++  ++ G  +      ++  ++  +  + +  +
Sbjct: 156 IVMLGAIGIQGLLPKSVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKL 215

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            LP   PY           A   +IV E+ +         G GA +    + G 
Sbjct: 216 RLPASVPYLFASLKIGISAALVGAIVGELPTGAR-----AGFGARMLVGDQYGQ 264


>gi|323940801|gb|EGB36989.1| inner membrane transport system [Escherichia coli E482]
          Length = 302

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 94  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 153

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 154 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 213

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 214 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 266

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 267 AIDLVLLGVIPVIVLAVLTDALF 289



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 42  DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 101

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 102 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 159

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 160 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 219

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 220 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 272

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 273 LGVIPVIVLAVLTDALF 289


>gi|322386997|ref|ZP_08060610.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
 gi|321142141|gb|EFX37633.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
          Length = 245

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 14/198 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  ++  T    L  +V+ +L   + A L      L  ++ P++ ++Q+IP +   
Sbjct: 44  DREFLWYHSWATLRVALLGLVLGVLIACIMAVLMDSLGWLNDLIYPMMVVVQTIPTIAIA 103

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++             L  I  I  +  + +  S+     +  +D+  +    R + 
Sbjct: 104 PILVLWLGYGI--------LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANP 155

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ  W+  +P S+P     + +S+S  +   V SE +          G+G Y+  + K  
Sbjct: 156 WQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQSKKLF 209

Query: 237 DLLAILYAMLTMLGVIFL 254
               +   ++ +  +  L
Sbjct: 210 QYDTMFAIIILVSLISLL 227



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 54  ATLRVALLGLVLGVLIACIMAVLMDSLGWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 114 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 169

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +   ++++  
Sbjct: 170 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFAIIILVSL 223

Query: 565 FVLALNRFL 573
             L   + +
Sbjct: 224 ISLLGMKLV 232


>gi|225027505|ref|ZP_03716697.1| hypothetical protein EUBHAL_01761 [Eubacterium hallii DSM 3353]
 gi|224955144|gb|EEG36353.1| hypothetical protein EUBHAL_01761 [Eubacterium hallii DSM 3353]
          Length = 264

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT+        + + + +   I + +   +S  ++P+  +L + P +   P+
Sbjct: 68  GQLLKHLGITLAETFASFFLVTAVSLFTAILLWWNNTLSEILEPYFVILNSLPKSAMAPI 127

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +        +    + IFG+    + N+     +   D  ++  + H +       
Sbjct: 128 FIVWLGNNMKTIIVTAISVAIFGS----ILNLFTSFMSTDPDKLKLIRTLHGSQADCLTK 183

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++      G      ++ E  +         GLG  I   ++      V+
Sbjct: 184 VILPMNLPTILSILKVDIGLCLIGVVIGEFLA------AKEGLGYLIIYGSQVFKMDWVM 237

Query: 557 LGVLIMCCFVLAL 569
           L ++++C     L
Sbjct: 238 LSIVLLCLIAALL 250



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 79/219 (36%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++      L    L ++   T     ++  +    +   A L   +  L  +L P
Sbjct: 52  SSPSRMLASGKELLLNGQLLKHLGITLAETFASFFLVTAVSLFTAILLWWNNTLSEILEP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
              I+ S+P        +V+  N     ++ A   AIF            +++ S  +  
Sbjct: 112 YFVILNSLPKSAMAPIFIVWLGNNMKTIIVTAISVAIFGSI--------LNLFTSFMSTD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            D  ++ R+   S       + +P ++P ++  + + +      VV  E +   +     
Sbjct: 164 PDKLKLIRTLHGSQADCLTKVILPMNLPTILSILKVDIGLCLIGVVIGEFLAAKE----- 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  I    +   +  ++ +++ +  +  L   +L R
Sbjct: 219 -GLGYLIIYGSQVFKMDWVMLSIVLLCLIAALLYGVLNR 256


>gi|260598591|ref|YP_003211162.1| putative osmoprotectant uptake system permease yehY [Cronobacter
           turicensis z3032]
 gi|260217768|emb|CBA32203.1| Putative osmoprotectant uptake system permease protein yehY
           [Cronobacter turicensis z3032]
          Length = 363

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
           A+R    +   +  +L+       L  +  R    L   L+I+Q++P +      +    
Sbjct: 155 AARHLTLIFGTLAPALVIGLPLGILCHRRPRWQPGLFAALNIIQTVPSVALFGLLMAPLA 214

Query: 122 ----YFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                F  L    V G  LA A+ A+    +  +   +   L  +P  + E +R   +S 
Sbjct: 215 GLAQAFPALGALGVSGTGLAPALIALTLYALLPLVRGVVAGLGQVPDAVRESARGMGMSA 274

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+FW++ VP ++P  + ++ +         V + +I  G       G G+ +   +   
Sbjct: 275 WQRFWHVDVPLALPVWLRSLRVVAVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 327

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L  ++ ++ +  + D L 
Sbjct: 328 ALDLVLLGVIPVVALAVVLDALF 350



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 93/272 (34%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L   L V      +   +L       ++L    +     + +   + ++  +  +   
Sbjct: 88  SGLWLMLAVSLLAASDAIGRLTRQPLWRWLLQAQIWMAPLWLLLSGHFDALSLLKEYANR 147

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q V        +T+  +   +  A +I +P+GI    RP     +     ++   P+   
Sbjct: 148 QTVFDDAAARHLTL--IFGTLAPALVIGLPLGILCHRRPRWQPGLFAALNIIQTVPSVAL 205

Query: 434 FPLVVSCVSYY------------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + +       ++  V+AG    P+  +E
Sbjct: 206 FGLLMAPLAGLAQAFPALGALGVSGTGLAPALIALTLYALLPLVRGVVAGLGQVPDAVRE 265

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++ W+ + ++ +P   P ++             ++V+ +   G       G GA
Sbjct: 266 SARGMGMSAWQRFWHVDVPLALPVWLRSLRVVAVQTVGMAVVAALIGAG-------GFGA 318

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    + L+   
Sbjct: 319 LVFQGLLSSALDLVLLGVIPVVALAVVLDALF 350


>gi|229588358|ref|YP_002870477.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360224|emb|CAY47081.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 217

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A++++++       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVILAIVVGVPLGVLMTRFPTLAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFSQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +    D LL
Sbjct: 179 RSDMSMLIVGAVLVSLLAIFADLLL 203



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + +I+A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVILAIVVGVPLGVLMTRFPTLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFSQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSLLAIFADLLL 203


>gi|284172820|ref|YP_003406202.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
 gi|284017580|gb|ADB63529.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 228

 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L Q        ++  +VI+L          A  +   + ++    I  +IP L   
Sbjct: 12  NWKDLFQLLIEHVELVVQTLVIALPLGIFLGIFIAYYQPAALGVLWGAGIAMTIPSLALF 71

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              + +     P          I A+       +  + Y  L  +  ++ E      ++ 
Sbjct: 72  GLLIPFLGIGNPP--------VIVALVLYAQLPIIRNTYIGLTGVNENMIEAGEGVGMTR 123

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P +   +           V    +      +   G+G YI   I + 
Sbjct: 124 WQRLRQIQIPVALPVITAGVR-------NATVILIGVATVGAYVGAGGLGDYIFTGIYQA 176

Query: 237 DLLAILYAMLTMLGVIFLYD 256
           +   ++ A + +  +  ++D
Sbjct: 177 NTEMVVVATIIVSLLALVFD 196



 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 73/201 (36%), Gaps = 11/201 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            FT  +   +  L    +  VV  ++IA  + I +GI+I +    +  +   A +    P
Sbjct: 7   EFTLNNWKDLFQLLIEHVELVVQTLVIALPLGIFLGIFIAYYQPAALGVLWGAGIAMTIP 66

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F L++  +       N  + + ++   Q  I+ N   G +    +  E      +T
Sbjct: 67  SLALFGLLIPFLGIG----NPPVIVALVLYAQLPIIRNTYIGLTGVNENMIEAGEGVGMT 122

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+  R I +P   P    G   A       + V      G       GLG YI     +
Sbjct: 123 RWQRLRQIQIPVALPVITAGVRNATVILIGVATVGAYVGAG-------GLGDYIFTGIYQ 175

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
            +   VV+  +I+    L  +
Sbjct: 176 ANTEMVVVATIIVSLLALVFD 196


>gi|302517613|ref|ZP_07269955.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302426508|gb|EFK98323.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 292

 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  ++  +I  +  + +GI +G    +S  + P+ ++L A P  V  P+ +       
Sbjct: 96  TLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPIFLIWFGLGP 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    A     +  R    +++P    +
Sbjct: 156 ASKIASAVVLVFFPVF----FNAFQGAREVDRNLVAHARILGASNRRVTFQVVIPSATSW 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             T    + G A   +IV E          T GLG  ++ S    +   V   ++I
Sbjct: 212 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNAAGVYAAMVI 261



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +    T    L   VI ++   V      + R L  VL P + ++ ++P +     
Sbjct: 87  GSLWEQVWYTLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPI 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+  A +   F +         F+ +Q    + R+L   +R    S  +
Sbjct: 147 FLIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVAHARILGASNRR 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +   +  ++ +S        +  E I          G+G  ++ +    + 
Sbjct: 199 VTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNA 252

Query: 239 LAILYAMLT 247
             +  AM+ 
Sbjct: 253 AGVYAAMVI 261


>gi|26989929|ref|NP_745354.1| ABC transporter, permease protein [Pseudomonas putida KT2440]
 gi|24984843|gb|AAN68818.1|AE016514_7 ABC transporter, permease protein [Pseudomonas putida KT2440]
          Length = 267

 Score = 74.2 bits (181), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 88/250 (35%), Gaps = 12/250 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYV 379
                +L+  S  R+   L +    +       IAW+   Y+V            D   +
Sbjct: 3   RPSTPWLRHPSVLRIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPML 62

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +    +T+    +   +A +I             + + + P+A LL   P     PL++ 
Sbjct: 63  LGALWMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIII 122

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             S   L   +  +L+ IF     I+ N + G  +       +      + W+    + +
Sbjct: 123 WCSDTTLALVICATLVAIF----PIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRI 178

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P +  G   A G A   ++V+E  +          L   I ++  + + P +   +
Sbjct: 179 PSALPCFFAGLRIASGLALIGAVVAEFVAGTGGTGAG--LAYQILQAGFQLNIPRLFAAL 236

Query: 560 LIMCCFVLAL 569
           +++    +AL
Sbjct: 237 VLIALTGVAL 246



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 77/228 (33%), Gaps = 10/228 (4%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  +   +    VP        +  D   L      T      +  ++++   + A +  
Sbjct: 33  LACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITFLSFALAVVIGTLAAFVFV 92

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR +   L P   ++Q  P++      +++  +     VI A L AIF         + 
Sbjct: 93  QSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVAIF--------PII 144

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L ++   L  +    R S WQ    L +P ++P     + ++        V +E
Sbjct: 145 ANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIGAVVAE 204

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +           +   I  A  + ++  +  A++ +         L+
Sbjct: 205 FVAGTGGTGAG--LAYQILQAGFQLNIPRLFAALVLIALTGVALFSLM 250


>gi|171779497|ref|ZP_02920461.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282114|gb|EDT47545.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 305

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 99/267 (37%), Gaps = 29/267 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMV 77
             ++V  +  IL+   Q+      I  + PIT       D  S    A    L      +
Sbjct: 31  LVLIVFIVAMILIFVAQKGLSTFFIDGVNPITFLFGSKWDPSSGSFGALPMILGSFIVTI 90

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTF---TVVYFMNLYP 128
           +S L     A  AA        +    +L P ++++  IP + +       +V F     
Sbjct: 91  LSALVATPIAIGAAVFMTEISPKYGAKILQPAIELLTGIPSVVYGFIGLQVIVPFTRSIF 150

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G      L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  +
Sbjct: 151 GGTGFGILSGVCVLFVMILPTVTFMTIDSLKAVPRHYKEASLAMGATRWQTIWRVILNAA 210

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAIK 234
            PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   ++
Sbjct: 211 RPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPTSLTTPAATLTSVLTMGIGNTVMGTVQ 270

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
              L ++   +L M     +  + + R
Sbjct: 271 NNVLWSLALVLLIMSLGFNMLVKFITR 297



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 25/217 (11%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFP 429
                   + +   +    ++  ++A+ I I   +++    P   +  +QP  +LL   P
Sbjct: 71  PSSGSFGALPMILGSFIVTILSALVATPIAIGAAVFMTEISPKYGAKILQPAIELLTGIP 130

Query: 430 ANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + V+         P   S            + +L +      + F  I    A P  +KE
Sbjct: 131 SVVYGFIGLQVIVPFTRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTIDSLKAVPRHYKE 189

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT---- 537
            + +   T W+    +IL    P   T  I     A+  ++  ++       + T+    
Sbjct: 190 ASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPTSLTTP 249

Query: 538 ----------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                     G+G  +  + +      + L +LIM  
Sbjct: 250 AATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|320176633|gb|EFW51675.1| Osmoprotectant ABC transporter permease protein YehY [Shigella
           dysenteriae CDC 74-1112]
          Length = 385

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQIVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 91/255 (35%), Gaps = 21/255 (8%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             ++ ++    ++L +    +   +        +  +  +   QDV        +T+   
Sbjct: 127 IRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL-- 184

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++        
Sbjct: 185 FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAFPW 244

Query: 451 W------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          + ++      ++  V+ G +  P D  E A +  ++G + + ++ 
Sbjct: 245 LGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLHVQ 304

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P ++             ++++ +   G       G GA + +     +   V+LG
Sbjct: 305 LPLALPVFLRSLRVVMVQIVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVLLG 357

Query: 559 VLIMCCFVLALNRFL 573
           V+ +    + ++   
Sbjct: 358 VIPVIVLAVLIDALF 372


>gi|113866967|ref|YP_725456.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525743|emb|CAJ92088.1| ABC-type transporter, permease component: QAT family [Ralstonia
           eutropha H16]
          Length = 216

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 80/203 (39%), Gaps = 10/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              +L +        + SA+ +++L       +  + R L   L+ +  I+ ++P +   
Sbjct: 10  SWPTLLKMTGEHLALVGSAVGLAILIGVPMGIVITRFRALATPLLALATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F            + A+ A+F   +  +  + Y +L N+   ++E  R   ++ 
Sbjct: 70  GLMIPIFARFGHAL---GYVPAVTAVFLYSLLPIMRNTYTALANVDPGIQEAGRGIGMTA 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  ++         + +I  G       G+G  I  AI + 
Sbjct: 127 WQRMRLVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           ++  +    + +  +  + D  L
Sbjct: 180 NMSKLAVGAVLVSLLAIVADAFL 202



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++ +    +  V   + +A +I +P+GI I     +++ +   A ++   P+   F 
Sbjct: 11  WPTLLKMTGEHLALVGSAVGLAILIGVPMGIVITRFRALATPLLALATIVLTLPSIALFG 70

Query: 436 LVVSCVSYYHLNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L++   + +      +     +   +   I+ N     +      +E      +T W+  
Sbjct: 71  LMIPIFARFGHALGYVPAVTAVFLYSLLPIMRNTYTALANVDPGIQEAGRGIGMTAWQRM 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + LP   P  + G  TA       + ++ +   G       GLG  I ++  + +  +
Sbjct: 131 RLVDLPLAVPVILGGVRTAVVMNIGVATIAAIIGAG-------GLGVLILQAISQSNMSK 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           + +G +++    +  + FL
Sbjct: 184 LAVGAVLVSLLAIVADAFL 202


>gi|146318758|ref|YP_001198470.1| phosphate ABC transporter permease [Streptococcus suis 05ZYH33]
 gi|223933467|ref|ZP_03625451.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptococcus suis 89/1591]
 gi|253751855|ref|YP_003024996.1| phosphate ABC transporter permease [Streptococcus suis SC84]
 gi|253753678|ref|YP_003026819.1| phosphate ABC transporter permease [Streptococcus suis P1/7]
 gi|253755442|ref|YP_003028582.1| phosphate ABC transporter permease [Streptococcus suis BM407]
 gi|330832920|ref|YP_004401745.1| ABC-type phosphate transport system, permease [Streptococcus suis
           ST3]
 gi|145689564|gb|ABP90070.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|223897840|gb|EEF64217.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptococcus suis 89/1591]
 gi|251816144|emb|CAZ51768.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251817906|emb|CAZ55678.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819924|emb|CAR46006.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292558425|gb|ADE31426.1| Binding-protein-dependent transport systems related protein
           [Streptococcus suis GZ1]
 gi|329307143|gb|AEB81559.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis ST3]
          Length = 305

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 18/221 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYASRTTLR 71
           +   L   L++ I+ ++L  + +  +    VD V IT        +  S    A      
Sbjct: 25  VITFLCLSLIVFIVAMILIFVAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISG 84

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
                ++S +     A  AA        +R   +L P+++++  IP + +    L   V 
Sbjct: 85  SFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVP 144

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E S +   + WQ  W
Sbjct: 145 FVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIW 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + +  + PG+   ++  M+  +   +A +M+V    VIP 
Sbjct: 204 RVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPT 244



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFP 429
               +   + +   +    ++  ++A+ I I   +++        +  +QP  +LL   P
Sbjct: 71  PSSKIFGALPMISGSFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIP 130

Query: 430 ANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           + V+         P V S      + +   +++  +MI  T   + F  +    A P  +
Sbjct: 131 SVVYGFIGLQVVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E + +   T W+    +IL    P   T  I     A+  ++  ++       + T+
Sbjct: 188 REASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 245


>gi|254779209|ref|YP_003057314.1| ABC-type transport system, permease; putative
           betaine/proline/choline transporter; putative membrane
           protein [Helicobacter pylori B38]
 gi|254001120|emb|CAX29075.1| ABC-type transport system, permease; putative
           betaine/proline/choline transporter; putative membrane
           protein [Helicobacter pylori B38]
          Length = 556

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VA+ +    + Y+V  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 32  LVAMVLKISMVKYLVKEF-HDRFIYFIDLIAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 90

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 91  ARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALK 146

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 147 EVREEVIKAAIGLGCNPKELFFRVHFLLAIPQILAGLRIA------VVMLVAMAGIGALI 200

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 201 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 239



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 67  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 124

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 125 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVHFLLAIPQ 178

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 179 ILAGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 231

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 232 SVLADKFV 239


>gi|227818635|ref|YP_002822606.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|36958890|gb|AAQ87315.1| ABC Transporter permease protein [Sinorhizobium fredii NGR234]
 gi|227337634|gb|ACP21853.1| putative permease component of ABC transporter protein
           [Sinorhizobium fredii NGR234]
          Length = 274

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 83/228 (36%), Gaps = 15/228 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLD-VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL  I E     D +   P       +L    + +  R+   +  +     V        
Sbjct: 45  LLPPIAEMATSMDRLATEPDRRSGDLTLWSDTTASLQRLFIGLGAAAAIGLVLGLTLGLL 104

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P++ ++  +P +  L    +             EL+ +  I       +   
Sbjct: 105 PVASAGLSPLVAVISMVPPMAILPVLFIILGLG--------ELSKVVLIVIGIAPFLVRD 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +  ++  IP +    +++   S WQ    + +P +MP L+  M +S+   + F++++E I
Sbjct: 157 LAMTVAAIPSEQIVKAQTLGASTWQVMLRVALPQAMPRLIEAMRLSLGPAFLFLISAEAI 216

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     G+G  I L  +   +  IL  +  +  + ++ D LL R
Sbjct: 217 A------AESGLGYRIFLVRRYLAMDVILPYVAWITLIAYVLDWLLAR 258



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ + +  A+ I + +G+ +G  P  S+ + P   +++  P     P++   +   
Sbjct: 78  ASLQRLFIGLGAAAAIGLVLGLTLGLLPVASAGLSPLVAVISMVPPMAILPVLFIILGLG 137

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L+      +L++ G   +++ ++    +A P++    A +   + W+    + LP   P
Sbjct: 138 ELSK----VVLIVIGIAPFLVRDLAMTVAAIPSEQIVKAQTLGASTWQVMLRVALPQAMP 193

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +     + G A+   I +E  +        +GLG  I       +   ++  V  +  
Sbjct: 194 RLIEAMRLSLGPAFLFLISAEAIA------AESGLGYRIFLVRRYLAMDVILPYVAWITL 247

Query: 565 FVLALNRFLWH 575
               L+  L  
Sbjct: 248 IAYVLDWLLAR 258


>gi|282898212|ref|ZP_06306203.1| Substrate-binding region protein of ABC-type glycine betaine
           transport system [Raphidiopsis brookii D9]
 gi|281196743|gb|EFA71648.1| Substrate-binding region protein of ABC-type glycine betaine
           transport system [Raphidiopsis brookii D9]
          Length = 513

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            + +  AMV+++           +  +L   ++ + + +Q+IP L         F+   P
Sbjct: 18  LILVAIAMVVAISIGIPLGIYITRQPKLAPGILGLANAIQTIPSLAIF-----GFLISVP 72

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AI A+    +  +  + Y  +  I   ++E      ++  Q    + +P +
Sbjct: 73  FLGGIGRNPAIVALALYALLPIIRNTYIGINGINPAIKEAGIGMGMTDRQLLLKVEIPLA 132

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  + ++        V S  I      I   G+G++I   I   +   IL   +  
Sbjct: 133 LPIILAGVRVA-------TVISVGIATVAAAIGAGGLGTFIFRGISTVNNELILAGAIPS 185

Query: 249 LGVIFLYDQLL 259
             +    D  L
Sbjct: 186 AVIALGADFCL 196



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + +++A  I IP+GI+I  +P ++  I   A  +   P+   F  ++S      +
Sbjct: 18  LILVAIAMVVAISIGIPLGIYITRQPKLAPGILGLANAIQTIPSLAIFGFLISVPFLGGI 77

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             N  +  L ++     I+ N   G +      KE      +T  +    + +P   P  
Sbjct: 78  GRNPAIVALALY-ALLPIIRNTYIGINGINPAIKEAGIGMGMTDRQLLLKVEIPLALPII 136

Query: 507 VTGAITA 513
           + G   A
Sbjct: 137 LAGVRVA 143


>gi|322833074|ref|YP_004213101.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168275|gb|ADW73974.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 235

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 71/204 (34%), Gaps = 8/204 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L     +  +    A+ I+++  F        + +  M+L+   + M+++P  G 
Sbjct: 12  LNDDGLLVLIFQHLIYSFEALFIAVIIAFPIGCYVGHTGKGAMLLIGSANAMRALPSFGL 71

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+ F  ++   +       I  I  + +  +   +Y  +  I   + + +     S
Sbjct: 72  IILLVILFGPVFESDLAFIVPCLIVLIILA-LPPIMMGVYSGIRAINPAIIDAATGMGYS 130

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             +    + +P +M  ++  +  S          +  + +G       G+G  I     +
Sbjct: 131 PLKLLLTVEIPCAMALILSGIRSSALQIVSTATIAAYVSLG-------GLGRLIIDGRAQ 183

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D   ++     +  +  L D   
Sbjct: 184 NDYPQMVAGAFMVGILALLVDVFF 207



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 82/213 (38%), Gaps = 10/213 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I ++++   + +   ++ L    +      + IA II  P+G ++G     +  +   A 
Sbjct: 2   INWLLDSGHWLNDDGLLVLIFQHLIYSFEALFIAVIIAFPIGCYVGHTGKGAMLLIGSAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFK 480
            + A P+     L+V        +   ++    +++I      I+  V +G  A      
Sbjct: 62  AMRALPSFGLIILLVILFGPVFESDLAFIVPCLIVLIILALPPIMMGVYSGIRAINPAII 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A+    +  +    + +P      ++G  ++     + + ++   S G       GLG
Sbjct: 122 DAATGMGYSPLKLLLTVEIPCAMALILSGIRSSALQIVSTATIAAYVSLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             I +   +  +P++V G  ++    L ++ F 
Sbjct: 175 RLIIDGRAQNDYPQMVAGAFMVGILALLVDVFF 207


>gi|294643336|ref|ZP_06721158.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|292641323|gb|EFF59519.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
          Length = 118

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +       +  +P+++ E SRSF  + WQ  + + +P ++P ++  +  ++     
Sbjct: 2   AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS 61

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV + MI  G       G+G  +   I +  +       + ++ +  + D++
Sbjct: 62  MVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 107



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               ++     G    P +  E + SF  T W+    + LP   P  +TG       + +
Sbjct: 2   AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS 61

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +++ + + G       GLG  + +   +        G + +    + L+R 
Sbjct: 62  MVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 107


>gi|126464984|ref|YP_001040093.1| binding-protein-dependent transport systems inner membrane
           component [Staphylothermus marinus F1]
 gi|126013807|gb|ABN69185.1| binding-protein-dependent transport systems inner membrane
           component [Staphylothermus marinus F1]
          Length = 248

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + +   W+ +       +                 + ++     +  RV +  +I   
Sbjct: 11  SIFFIITMWYFLAFYSPKYLFPYPHTVFYASIDLITKMDLLENLLYSTIRVAIGYVIGVF 70

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I +G+ I     I S + P    +   P+  F PL++  +       +      +I  
Sbjct: 71  LGIGLGVLILLSRLIRSLLYPIVTFIVITPSFAFIPLLMIWIGL----NDWLAITAIIIC 126

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + I++  ++       +  E A  +  T      +IILP    +  T      G +W 
Sbjct: 127 TAFPIIYAFMSSHKYIDRELIEAARIYGATDTYIAIHIILPLSITHLATILRYEAGHSWR 186

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
              V+E  +       + GLGA +  +       EV
Sbjct: 187 LGFVTEYIAL------SNGLGALMMYAYSTLRVDEV 216



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 14/197 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +    +T+R+    VI +        L   SR +  +L PI+  +   P   F+   +
Sbjct: 50  LLENLLYSTIRVAIGYVIGVFLGIGLGVLILLSRLIRSLLYPIVTFIVITPSFAFIPLLM 109

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++            +  AI AI     + + ++   S   I R+L E +R +  +     
Sbjct: 110 IWIGLN--------DWLAITAIIICTAFPIIYAFMSSHKYIDRELIEAARIYGATDTYIA 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P S+  L   +       W     +E I + +      G+G+ +  A     +  
Sbjct: 162 IHIILPLSITHLATILRYEAGHSWRLGFVTEYIALSN------GLGALMMYAYSTLRVDE 215

Query: 241 ILYAMLTMLGVIFLYDQ 257
           ++  ++ +  + +++ Q
Sbjct: 216 VIALLIIIGLLTYIFQQ 232


>gi|148546143|ref|YP_001266245.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|148510201|gb|ABQ77061.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida F1]
 gi|313497238|gb|ADR58604.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida BIRD-1]
          Length = 217

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
             LD   + Q   +  + +  A+ +++L       L  +   +   L     ++ +IP +
Sbjct: 8   AHLDWAQVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPAVAGPLQASATVLLTIPSI 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 + ++     G      L AI A+F   +  +  + Y +L N+   + E +R   
Sbjct: 68  ALFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPIMRNTYLALTNVEPGIREAARGIG 124

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I
Sbjct: 125 MTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTSI 177

Query: 234 KEQDLLAILYAMLTM 248
              D+  +L   + +
Sbjct: 178 SRSDMSMLLVGAVLV 192



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F + D   V+ L    +  V + + +A ++ +P+GI +   P ++  +Q  A +L 
Sbjct: 3   LLDTFAHLDWAQVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPAVAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   I+ N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPIMRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           S  +     +++G +++ 
Sbjct: 176 SISRSDMSMLLVGAVLVS 193


>gi|291087046|ref|ZP_06345233.2| putative ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291076292|gb|EFE13656.1| putative ABC transporter, permease protein [Clostridium sp. M62/1]
          Length = 270

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----I 367
            +  +  +   +         +    +     + +FW  +    A+ I    I      +
Sbjct: 1   MISTIWPSKREVNAVTFSGRSETGRPRLRRAAVILFWISLWQAAAVLIENSIIFVGPLDV 60

Query: 368 VNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           V     Q      WL    ++ R+    ++A  +    G    F P +   + P   L+ 
Sbjct: 61  VRALFLQLPTEEFWLSLSFSVLRITAGFLLAFFLAAIAGTASFFLPVLKEFLAPAVLLMK 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASS 485
           + P   F  L +  +   +L      S+ + F   + +++ + ++G S       E+A  
Sbjct: 121 SIPVASFVILALIWIGSENL------SVFISFMVVFPMIYESTLSGLSGADAQLLEMACV 174

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F I+G R +R I LP + PY       A G    + + +EV            +G  +  
Sbjct: 175 FRISGLRKFRAIYLPALLPYLAGSCRFALGMGIKSGVAAEVIGLPSFS-----IGEQLYT 229

Query: 546 STEKGSFPEVVLGVLIMCCF 565
           S        +    L++   
Sbjct: 230 SKIYLETANLFAWTLVIIAV 249



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 9/194 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +     +L+        P D+V  + + L         S + LR+ +  +++     +  
Sbjct: 40  LWQAAAVLIENSIIFVGPLDVVRALFLQLPTEEFWLSLSFSVLRITAGFLLAFFLAAIAG 99

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           T +     L   L P + +M+SIP+  F+   +++         IG+E  ++F  F    
Sbjct: 100 TASFFLPVLKEFLAPAVLLMKSIPVASFVILALIW---------IGSENLSVFISFMVVF 150

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  S    L      L E++  FR+SG +KF  + +P  +P L  +   ++  G    
Sbjct: 151 PMIYESTLSGLSGADAQLLEMACVFRISGLRKFRAIYLPALLPYLAGSCRFALGMGIKSG 210

Query: 208 VASEMIVVGDTVIP 221
           VA+E+I +    I 
Sbjct: 211 VAAEVIGLPSFSIG 224


>gi|291288338|ref|YP_003505154.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885498|gb|ADD69198.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 378

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             R       ++++++        ++A+   LG  L   L+I+Q+IP +      +V   
Sbjct: 168 LLRHIYIAFGSIMLAVFAGIPIGIISARRSSLGGKLFSFLNIVQTIPSIALFGLLMVPLA 227

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 VI             A+ A+F   +  +  + Y+ + NI   + E ++   ++ 
Sbjct: 228 WAASNSVILKSAGVSGIGWAPAVIALFLYSLLPIARNTYEGVKNIGDGVIEAAKGVGMTR 287

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P SMP ++  + ++       +V S       ++I   G+G +I   + + 
Sbjct: 288 RYMLFKVELPLSMPVILNGVRIA-------LVQSIGNTAVVSLIGAGGMGVFIFQGLGQS 340

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  I+   +  + +  L D ++
Sbjct: 341 AVPLIMLGTIPTIIMAVLADSIM 363



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 21/245 (8%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + L I  +  +  V  G     +  +V +  Y D      L  I  +     I++A   
Sbjct: 128 RFFLVILMYMPLVCVIAGGLLNDVSVMVEYANYNDRFSSELLRHI--YIAFGSIMLAVFA 185

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS------- 453
            IP+GI    R  +  K+  F  ++   P+   F L++  +++   N  +  S       
Sbjct: 186 GIPIGIISARRSSLGGKLFSFLNIVQTIPSIALFGLLMVPLAWAASNSVILKSAGVSGIG 245

Query: 454 -----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                + +   +   I  N   G     +   E A    +T       + LP   P  + 
Sbjct: 246 WAPAVIALFLYSLLPIARNTYEGVKNIGDGVIEAAKGVGMTRRYMLFKVELPLSMPVILN 305

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   +   + V  +   G       G+G +I +   + + P ++LG +      + 
Sbjct: 306 GVRIALVQSIGNTAVVSLIGAG-------GMGVFIFQGLGQSAVPLIMLGTIPTIIMAVL 358

Query: 569 LNRFL 573
            +  +
Sbjct: 359 ADSIM 363


>gi|149007758|ref|ZP_01831367.1| ABC transporter membrane-spanning permease - unknown substrate
           [Streptococcus pneumoniae SP18-BS74]
 gi|147760753|gb|EDK67725.1| ABC transporter membrane-spanning permease - unknown substrate
           [Streptococcus pneumoniae SP18-BS74]
          Length = 252

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 85/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 9   RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 80  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 136 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 196 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|237739884|ref|ZP_04570365.1| glycine betaine transport system permease [Fusobacterium sp.
           2_1_31]
 gi|229423492|gb|EEO38539.1| glycine betaine transport system permease [Fusobacterium sp.
           2_1_31]
          Length = 513

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L A+ I+ +   +   + ++ RR   +++  ++I+ +IP +  L F +    
Sbjct: 20  TIEHVLISLLAISIASVLGIILGIIISEYRRFSGLILGTVNILYTIPSIALLGFFITITG 79

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A+ A+    +  +  S Y  + NI   + E S     +  Q+ + + 
Sbjct: 80  VGNT--------TALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVK 131

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P L+  +          V  +  +    + +   G+G  I   I   +       
Sbjct: 132 LPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLG 184

Query: 245 MLTMLGVIFLYDQLL 259
            L +  +  ++D +L
Sbjct: 185 SLLIALLALIFDFIL 199



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 14/180 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S  I     +L   P+       ++     +    + L +  +      I+ +   
Sbjct: 48  YRRFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYT 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E +     T  +    + LP   P  ++G         N   ++   +  
Sbjct: 104 GIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVLMSGIR-------NMVTMTIALAGI 156

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTRCLRL 587
              +   GLG  I       +     LG L++    L  +    F+   L  Y     ++
Sbjct: 157 ASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIALLALIFDFILGFMEKRLTNYKRTKYKV 216


>gi|160891878|ref|ZP_02072881.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492]
 gi|156858356|gb|EDO51787.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492]
          Length = 394

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    A   ++  + R+  +L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVAIYMSEVANSRVRNLLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FLQQVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGPHYEALFLLGVVLFFISLL 381



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++       + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVAIYMSEVANSRVRNLLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|149011275|ref|ZP_01832522.1| choline transporter [Streptococcus pneumoniae SP19-BS75]
 gi|147764265|gb|EDK71196.1| choline transporter [Streptococcus pneumoniae SP19-BS75]
          Length = 307

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 15/168 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
              +L   ++ I  I Q+IP L  L         L+   +    L A+ A+    ++ + 
Sbjct: 46  YHEKLADWVLQIAGIFQTIPSLALL--------GLFIPLMGIGTLPALTALVIYAIFPIL 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L  I  +L+E   +F ++ W++     +P +MP ++  +  +          + 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +I  G       G+GS+I L I   +   IL   L+   +   ++ LL
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198



 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           +++ +   ++  +   A +    P+     L +  +    L     L +  IF     IL
Sbjct: 42  VFLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALVIYAIF----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N I G      + +E   +F +T W   +   +P   P  ++G  TA       + ++ 
Sbjct: 98  QNTITGLKGIDPNLQEAGIAFGMTRWERLKKFEIPLAMPVIMSGIRTAAVLIIGTATLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG++I    ++ +   +++G L      +A N  L
Sbjct: 158 LIGAG-------GLGSFILLGIDRNNASLILIGALSSAVLAIAFNFLL 198


>gi|158319969|ref|YP_001512476.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
 gi|158140168|gb|ABW18480.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus oremlandii OhILAs]
          Length = 253

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 102/251 (40%), Gaps = 14/251 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            F  R   P I     F+L+    ++++        P +++  +   L + +      +T
Sbjct: 3   AFSLRNRGPIIISTAVFLLIWHWASVVVGQSVIVPSPGEVLHSLLEILKMKTTLHIIFQT 62

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R +S+ ++SLL   +          L  ++ P+L  ++++P++  +   +++  +   
Sbjct: 63  LKRTVSSFIVSLLGAILVGFTTYTMPMLRKIMSPVLYFIKAVPVVAVILLILIWSNSEVA 122

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             ++G         F      +   +  SL +I R+L  +++ +++S + +   L +P  
Sbjct: 123 PAIVG---------FLMVFPFLYEGVLNSLTSIDRELISMTKLYKVSLFYRVKDLHLPSI 173

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
             G+   +  +    +  VVA E++       P   IGS I       +   +L  ++ M
Sbjct: 174 YFGMNGMLSSAFGLAFKSVVAGEVLS-----HPKFSIGSAIYREKNYLNTSGVLAWLIIM 228

Query: 249 LGVIFLYDQLL 259
           + +    DQ +
Sbjct: 229 VSISIFLDQFV 239



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +  L I+ +  V      I       + +      +   + +   T+ R V   I++ +
Sbjct: 16  TAVFLLIWHWASVVVGQSVIVPSPGEVLHSLLEILKMKTTLHIIFQTLKRTVSSFIVSLL 75

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             I VG      P +   + P    + A P      L++        N  +  +++    
Sbjct: 76  GAILVGFTTYTMPMLRKIMSPVLYFIKAVPVVAVILLILIW-----SNSEVAPAIVGFLM 130

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
              ++   V+   ++   +   +   + ++ +   + + LP I+        +A G A+ 
Sbjct: 131 VFPFLYEGVLNSLTSIDRELISMTKLYKVSLFYRVKDLHLPSIYFGMNGMLSSAFGLAFK 190

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +  EV S          +G+ I       +   V+  ++IM    + L++F+
Sbjct: 191 SVVAGEVLSHPKFS-----IGSAIYREKNYLNTSGVLAWLIIMVSISIFLDQFV 239


>gi|56696662|ref|YP_167023.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
 gi|56678399|gb|AAV95065.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
          Length = 330

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 80/207 (38%), Gaps = 12/207 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++   I +++ + + + I     +   + P+A +    P     P++
Sbjct: 126 SLVYHGWVTLSATLLGFGIGTVLGVLLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 185

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  + + + ++  ++ G  +      ++  +++ +    +  +
Sbjct: 186 IVVLYSVGVQGIIPKAVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYNASQGETFWKL 245

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV- 556
            LP   PY           +   +IV E+ +        +GLGA +   +  G   ++  
Sbjct: 246 RLPASMPYLFASLKIGIAASLVGAIVGELPTGA-----VSGLGARLLAGSYYGQTVQIWS 300

Query: 557 ----LGVLIMCCFVLA--LNRFLWHPL 577
                 +L  C   L   + R +   +
Sbjct: 301 ALFGAAILAACLVGLLGVIERLVLKRM 327



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 83/239 (34%), Gaps = 9/239 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +  A           L    +  +      ++       SL  +   T    L    I  
Sbjct: 87  NRFAVPETWAQERPRLPAPHQVAIELWDTTVMKKITSKRSLVYHGWVTLSATLLGFGIGT 146

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +   + A     SR + M ++P   + Q+IPI+      +V   ++    +I   + + +
Sbjct: 147 VLGVLLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSVGVQGIIPKAVISAY 206

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F    + +   M + L +      ++ R++  S  + FW L +P SMP L  ++ + +
Sbjct: 207 LSF----FPVVVGMVKGLRSPDAMQLDLLRTYNASQGETFWKLRLPASMPYLFASLKIGI 262

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      +  E+         + G+G+ +         + I  A+     +      LL
Sbjct: 263 AASLVGAIVGEL-----PTGAVSGLGARLLAGSYYGQTVQIWSALFGAAILAACLVGLL 316


>gi|298292808|ref|YP_003694747.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296929319|gb|ADH90128.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 263

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 81/195 (41%), Gaps = 7/195 (3%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D + +     +T+   V+ ++ A I  + + +       +   + P A +L   P     
Sbjct: 52  DRVVLFQSMLVTLETTVLALLFAVIGGVGLALIFASARIVEFSLFPIAVILQVTPVIAVA 111

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++      +L+ +  + +       + +L N   G ++   + +++      + W+  
Sbjct: 112 PLMLI-----YLSTDTAVLVCAWIVAFFPVLSNTTLGLNSVDPNLRDLFRLAGASRWQTL 166

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   PY++ G   A G A   S+V E+A+      + +GL   I ES  + + P 
Sbjct: 167 AQLKLPTALPYFLGGLRIAGGLALIGSVVGEIAAGSA--GQGSGLAFRIVESAYRLNIPR 224

Query: 555 VVLGVLIMCCFVLAL 569
           +   +L++    + +
Sbjct: 225 LFAALLLISLAGILI 239



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 92/251 (36%), Gaps = 15/251 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA ++V     + L+ +    +P  +  +  +  D   L Q    T    + A++ +++
Sbjct: 17  VLAALVVAWEAAVDLNNLPPYVLPSPLAVMETLIKDRVVLFQSMLVTLETTVLALLFAVI 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A + A +R +   L PI  I+Q  P++      ++Y            + A +  
Sbjct: 77  GGVGLALIFASARIVEFSLFPIAVILQVTPVIAVAPLMLIYLS---------TDTAVLVC 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +    + +  +    L ++  +L ++ R    S WQ    L +P ++P  +  + ++  
Sbjct: 128 AWIVAFFPVLSNTTLGLNSVDPNLRDLFRLAGASRWQTLAQLKLPTALPYFLGGLRIAGG 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM----LGVIFLYDQ 257
                 V  E+           G+   I  +    ++  +  A+L +    + +      
Sbjct: 188 LALIGSVVGEIAAGSAGQGS--GLAFRIVESAYRLNIPRLFAALLLISLAGILIYAALSL 245

Query: 258 LLFRPMIVWSN 268
           L +  +  W  
Sbjct: 246 LSWFVLRRWHE 256


>gi|294789947|ref|ZP_06755167.1| choline transporter [Simonsiella muelleri ATCC 29453]
 gi|294482113|gb|EFG29820.1| choline transporter [Simonsiella muelleri ATCC 29453]
          Length = 517

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A+ +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF     
Sbjct: 40  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ---- 95

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
               + Y  L  I + +++   SF LS WQ    + +P ++P ++  +  +
Sbjct: 96  ----NTYLGLTQIDQSIQDAYTSFGLSRWQSLCRIELPMALPAMISGIRTA 142



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 4/122 (3%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
               R   +  +  F  +L   P+     L++  V        + L+L  +      I  
Sbjct: 40  LFARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQ 95

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G +      ++  +SF ++ W+    I LP   P  ++G  TA       + ++ +
Sbjct: 96  NTYLGLTQIDQSIQDAYTSFGLSRWQSLCRIELPMALPAMISGIRTAAVLIVGTATLAAL 155

Query: 527 AS 528
             
Sbjct: 156 IG 157


>gi|224282299|ref|ZP_03645621.1| ABC transporter permease [Bifidobacterium bifidum NCIMB 41171]
          Length = 267

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 90/246 (36%), Gaps = 15/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P    +   ++V  I     H I +  +         I      L +  + TT   +
Sbjct: 16  RVAPPAVTVGGLLIVWEIAVDAGH-ISQRVLASPSQIAASIVKTWPDLWEATAITTYEAI 74

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I+ +   +       S+ L   + P+L   Q+IP++      +++F          
Sbjct: 75  TGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFG--------F 126

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +    V+ +     + +  +P+  E+V+ +   +     W++ +  +   + 
Sbjct: 127 EPLGKIVIVAVFGVFPVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVF 186

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +   V +E +   +      G+G ++  A        I  A + ++ +  
Sbjct: 187 GGLRISAAYVFGTAVTAEYLGAMN------GLGIWLQAAFNSFRTPLIFSATIMVVALTA 240

Query: 254 LYDQLL 259
           L   ++
Sbjct: 241 LLLTII 246



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 74/239 (30%), Gaps = 10/239 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F ++         L I W   V    I     +    +     +    +     IT +  
Sbjct: 14  FARVAPPAVTVGGLLIVWEIAVDAGHISQRVLASPSQIAASIVKTWPDLWEATAITTYEA 73

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +IA++  + +GI +     +   I P        P     PL +    +  L   +
Sbjct: 74  ITGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFGFEPLGKIV 133

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++  +F     +      G  A P  +++VA +   T      ++ L         G 
Sbjct: 134 IVAVFGVF----PVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVFGGL 189

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +    +  ++ +E            GLG ++  +      P +    +++      L
Sbjct: 190 RISAAYVFGTAVTAEYLG------AMNGLGIWLQAAFNSFRTPLIFSATIMVVALTALL 242


>gi|15891647|ref|NP_357319.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15160093|gb|AAK90104.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 261

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    ++   ++     +T+  + + +       I V   I   P     + P   +L A
Sbjct: 37  VAAAFWRQSGFLFGQAMVTLGEMALGLAAGVTAGILVAFTIAATPRFGRLVWPMVLVLQA 96

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           FP  V  P++V    +   +  +  ++++ F     +      G +       + AS   
Sbjct: 97  FPVFVLAPILVLWFGFGMASKVVMTAVIIFF----PVASAFTDGLNRTDRAILDAASLTE 152

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            + W+    + +P   P  ++G   A   A   +++ E          + GLG  + +S 
Sbjct: 153 ASHWQILTRLRVPLALPSLISGLRVAAPLAPLGAVIGEWVG------ASAGLGFVMIQSN 206

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +     +   + I+    + L
Sbjct: 207 ARMQTDTMFAAMAILAVMAVLL 228



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  T   M   +   +    + A   A + R G ++ P++ ++Q+ P+       V
Sbjct: 48  LFGQAMVTLGEMALGLAAGVTAGILVAFTIAATPRFGRLVWPMVLVLQAFPVFVLAPILV 107

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F      KV+   +   F + ++            L    R + + +     S WQ  
Sbjct: 108 LWFGFGMASKVVMTAVIIFFPVASA--------FTDGLNRTDRAILDAASLTEASHWQIL 159

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L VP ++P L+  + ++        V  E +          G+G  +  +        
Sbjct: 160 TRLRVPLALPSLISGLRVAAPLAPLGAVIGEWVGASA------GLGFVMIQSNARMQTDT 213

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +  AM  +  +  L   ++ R
Sbjct: 214 MFAAMAILAVMAVLLRLIVDR 234


>gi|318058700|ref|ZP_07977423.1| ABC transporter permease protein [Streptomyces sp. SA3_actG]
 gi|318076887|ref|ZP_07984219.1| ABC transporter permease protein [Streptomyces sp. SA3_actF]
          Length = 292

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  ++  +I  +  + +GI +G    +S  + P+ ++L A P  V  P+ +       
Sbjct: 96  TLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPIFLIWFGLGP 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    A     +  R    +++P    +
Sbjct: 156 ASKIASAVVLVFFPVF----FNAFQGAREVDRNLVAHARILGASNRRVTFQVVIPSATSW 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             T    + G A   +IV E          T GLG  ++ S    +   V   ++I
Sbjct: 212 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNAAGVYAAMVI 261



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +    T    L   VI ++   V      + R L  VL P + ++ ++P +     
Sbjct: 87  GSLWEQVWYTLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPI 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+  A +   F +         F+ +Q    + R+L   +R    S  +
Sbjct: 147 FLIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVAHARILGASNRR 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +   +  ++ +S        +  E I          G+G  ++ +    + 
Sbjct: 199 VTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNA 252

Query: 239 LAILYAMLT 247
             +  AM+ 
Sbjct: 253 AGVYAAMVI 261


>gi|317009172|gb|ADU79752.1| osmoprotection protein (proWX) [Helicobacter pylori India7]
          Length = 553

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 75/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L          VAI +    + Y++  F +   +Y I L       V +      +  
Sbjct: 17  WLLHSVDVATQHLVAIVLKISVVKYLIQEF-HDRFIYFIDLLAQHFIIVALSGFFVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILAGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G LI+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADQFV 236



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +    L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSGFFVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILAGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|296282190|ref|ZP_06860188.1| ABC transporter permease protein [Citromicrobium bathyomarinum
           JL354]
          Length = 516

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG----F 115
            L    ++  +    A+ + +      A  A++S+ +    +    ++Q+IP L     F
Sbjct: 10  GLGGVLAQHVILAACAIGLGIAVALPLAVWASRSQTVSRAALGFASLVQTIPALALLALF 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +               L A+ A+    +  +  +   +  N+   + E +    +S
Sbjct: 70  FPILLSLRAVFGEDLPTLGFLPALLALALYALLPILRNAVTAQTNLDPGVIEAADGVGMS 129

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ+   +  P + P ++  +  +     + + A+ +       I  P +G  I   ++ 
Sbjct: 130 FWQRLRLVEAPLTAPYIMAGIRTA---AVWTIGAATLAT----TIGQPSLGDPIFAGLQT 182

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
           Q+   +L   +   G+  + D LL
Sbjct: 183 QNWSLVLAGCIASAGLAIIADALL 206



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 376 VLYVIWLGCITMFRVVVL---IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
              ++ LG +    V++    I +   + +P+ +W      +S     FA L+   PA  
Sbjct: 5   WAALMGLGGVLAQHVILAACAIGLGIAVALPLAVWASRSQTVSRAALGFASLVQTIPALA 64

Query: 433 ----FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF----NVIAGASAFPNDFKEVAS 484
               FFP+++S  + +  +      L  +     Y L     N +   +       E A 
Sbjct: 65  LLALFFPILLSLRAVFGEDLPTLGFLPALLALALYALLPILRNAVTAQTNLDPGVIEAAD 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              ++ W+  R +  P   PY + G  TA      A+ ++         +    LG  I 
Sbjct: 125 GVGMSFWQRLRLVEAPLTAPYIMAGIRTAAVWTIGAATLA-------TTIGQPSLGDPIF 177

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +  ++  V+ G +      +  +  L
Sbjct: 178 AGLQTQNWSLVLAGCIASAGLAIIADALL 206


>gi|239813122|ref|YP_002942032.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239799699|gb|ACS16766.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 256

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 10/169 (5%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I +G+ +G     +       ++L   P+    PL +    +           ++ F T 
Sbjct: 80  IALGLVLGLSRRAAQLGSLSIEVLRPVPSVALIPLAMLTFGFG----VRMELAIVAFATF 135

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           W +L  V +          EV+    ++       I+LP I              A   +
Sbjct: 136 WPLLVLVQSAVQQIEPRLLEVSRVLGLSARERAFKIVLPAIAARLFVALRLGVAVALVVA 195

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +  E+A+  +      G+G  +  + +      ++  +  +     A+N
Sbjct: 196 VTVEIAANPN------GMGYAMMIAQQSFDPALMLAWLGWIGVVGFAVN 238



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 74/228 (32%), Gaps = 14/228 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
                    G      P              SL Q    T       +++  +       
Sbjct: 25  WYARRAAALGSDALAPPSAAARAFMGAALDGSLWQATGFTLGTAALGLLLGAVLGIALGL 84

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +   SRR   +    +++++ +P +  +   ++ F      ++          +  +  W
Sbjct: 85  VLGLSRRAAQLGSLSIEVLRPVPSVALIPLAMLTFGFGVRMELA--------IVAFATFW 136

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +   +  ++  I   L EVSR   LS  ++ + + +P     L   + + ++      V
Sbjct: 137 PLLVLVQSAVQQIEPRLLEVSRVLGLSARERAFKIVLPAIAARLFVALRLGVAVALVVAV 196

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             E+    +      G+G  + +A +  D   +L  +  +  V F  +
Sbjct: 197 TVEIAANPN------GMGYAMMIAQQSFDPALMLAWLGWIGVVGFAVN 238


>gi|323187858|gb|EFZ73154.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli RN587/1]
          Length = 385

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGVLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 356 LGVIPVIVLAVLTDALF 372


>gi|295092275|emb|CBK78382.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Clostridium cf. saccharolyticum K10]
          Length = 270

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 87/260 (33%), Gaps = 17/260 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY----I 367
            +  +  +   +         +    +     + +FW  +    A+ I    I      +
Sbjct: 1   MISTIWPSKREVNAVTFSGRSETGRPRLRRAAVILFWISLWQAAAVLIGNSIIFVGPLDV 60

Query: 368 VNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           V     Q      WL    ++ R+    ++A  +    G    F P +   + P   L+ 
Sbjct: 61  VRALFLQLPTEEFWLSLSFSVLRITAGFLLAFFLAAIAGTASFFLPVLKEFLAPAVLLMK 120

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASS 485
           + P   F  L +  +   +L      S+ + F   + +++ + ++G S       E+A  
Sbjct: 121 SIPVASFVILALIWIGSENL------SVFISFMVVFPMIYESTLSGLSGADAQLLEMACV 174

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           F I+G R +R I  P + PY       A G    + + +EV            +G  +  
Sbjct: 175 FRISGLRKFRAIYFPALLPYLAGSCRFALGMGIKSGVAAEVIGLPSFS-----IGEQLYT 229

Query: 546 STEKGSFPEVVLGVLIMCCF 565
           S        +    L++   
Sbjct: 230 SKIYLETANLFAWTLVIIAV 249



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 9/194 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +     +L+        P D+V  + + L         S + LR+ +  +++     +  
Sbjct: 40  LWQAAAVLIGNSIIFVGPLDVVRALFLQLPTEEFWLSLSFSVLRITAGFLLAFFLAAIAG 99

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           T +     L   L P + +M+SIP+  F+   +++         IG+E  ++F  F    
Sbjct: 100 TASFFLPVLKEFLAPAVLLMKSIPVASFVILALIW---------IGSENLSVFISFMVVF 150

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  S    L      L E++  FR+SG +KF  +  P  +P L  +   ++  G    
Sbjct: 151 PMIYESTLSGLSGADAQLLEMACVFRISGLRKFRAIYFPALLPYLAGSCRFALGMGIKSG 210

Query: 208 VASEMIVVGDTVIP 221
           VA+E+I +    I 
Sbjct: 211 VAAEVIGLPSFSIG 224


>gi|213966733|ref|ZP_03394884.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. tomato T1]
 gi|257482124|ref|ZP_05636165.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|301383242|ref|ZP_07231660.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061446|ref|ZP_07252987.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133489|ref|ZP_07259479.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928583|gb|EEB62127.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. tomato T1]
 gi|330888741|gb|EGH21402.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330962456|gb|EGH62716.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
 gi|330987531|gb|EGH85634.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331011407|gb|EGH91463.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 217

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 79/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +    +  A+ +++L       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLQLTWQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 8/207 (3%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F++ D   V+ L    +  V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 4   LSAFSHLDWAQVLQLTWQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|158424072|ref|YP_001525364.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330961|dbj|BAF88446.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 270

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 84/226 (37%), Gaps = 14/226 (6%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++   I+   +PR  V    +        Q   RT    L   V   +F      L  ++
Sbjct: 45  VVAFAIRPYYLPRPTVIFAALWQTPAPYVQGFLRTLSETLLGFVAGGVFGIGIGLLFFRA 104

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L  ++ P+  + Q+IP++ F    V++F N          LA     F    + +T +
Sbjct: 105 RALRELVFPLFIVSQTIPVIAFGALVVLWFGNTL--------LAKAAIAFYLTFFPVTVN 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L ++    E + RSF  S  Q    L  P ++P +   + ++ S      +  E  
Sbjct: 157 TLLGLESVDPRQEALLRSFGASPLQLLTRLQFPTALPQIFVALRLASSLALVGAIVGEWF 216

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  +   +  +++++I   +L    +   +  L+
Sbjct: 217 G------DTVGLGVLLLQGMYTENVVSIWATLLVSALLGTGFYALV 256



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            +   W  +V   AI   +     ++    +Q     +     T+   ++  +   +  I
Sbjct: 36  AVFAAWEALVVAFAIRPYYLPRPTVIFAALWQTPAPYVQGFLRTLSETLLGFVAGGVFGI 95

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+       +   + P   +    P   F  LVV       L        L    T +
Sbjct: 96  GIGLLFFRARALRELVFPLFIVSQTIPVIAFGALVVLWFGNTLLAKAAIAFYL----TFF 151

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +  N + G  +     + +  SF  +  +    +  P   P        A   A   +I
Sbjct: 152 PVTVNTLLGLESVDPRQEALLRSFGASPLQLLTRLQFPTALPQIFVALRLASSLALVGAI 211

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           V E          T GLG  + +     +   +   +L+           +
Sbjct: 212 VGEWFG------DTVGLGVLLLQGMYTENVVSIWATLLVSALLGTGFYALV 256


>gi|28871708|ref|NP_794327.1| glycine betaine/choline ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|66047477|ref|YP_237318.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|28854960|gb|AAO58022.1| glycine betaine/choline OpuC ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|63258184|gb|AAY39280.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330969558|gb|EGH69624.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|331019723|gb|EGH99779.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 217

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 79/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +    +  A+ ++++       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLQLTWQHITLVGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL + W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLQLTWQHITL---VGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|167994476|ref|ZP_02575567.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205327666|gb|EDZ14430.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
          Length = 236

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAASGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E AS   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAASGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|116493635|ref|YP_805369.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei ATCC 334]
 gi|116103785|gb|ABJ68927.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei ATCC 334]
          Length = 220

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
             A+ R L   ++ I +++Q+IP L  L+  ++                 I  +F   + 
Sbjct: 49  AIARHRTLSSTVIGIANVIQTIPSLAMLSIIMLGLGLGV--------NTVIVTVFLYSLL 100

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  + N+ ++L + ++   ++ WQ  + + +P S+  ++  +          +V
Sbjct: 101 PIIKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSLSVIMAGIR-------NALV 153

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +  I      +   G+G  I       +  AI+ A      ++ +   L+ 
Sbjct: 154 VAIGITAIGAFVGAGGLGDIIVRGTNATNGGAIILAGALPTALMAIISDLVL 205



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 19/222 (8%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ   Y + +     +        I+++ V++  II   I     + I     +SS + 
Sbjct: 6   TWQQFWYYLANNGSYVLSQFARHFLISIYGVLIAAIIGIPIG----LAIARHRTLSSTVI 61

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             A ++   P+     +++  +          + + +   +   I+ N   G      + 
Sbjct: 62  GIANVIQTIPSLAMLSIIMLGLGLGVNT----VIVTVFLYSLLPIIKNTYTGMQNVDKNL 117

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A    +T W+    + +P      + G   A   A   + +      G       GL
Sbjct: 118 MDAAKGMGMTRWQSLYMVEIPLSLSVIMAGIRNALVVAIGITAIGAFVGAG-------GL 170

Query: 540 GAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
           G  I   T   +   ++L       +M      +  FL   L
Sbjct: 171 GDIIVRGTNATNGGAIILAGALPTALMAIISDLVLGFLERRL 212


>gi|16760368|ref|NP_455985.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141868|ref|NP_805210.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213163480|ref|ZP_03349190.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213420677|ref|ZP_03353743.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213428722|ref|ZP_03361472.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213865335|ref|ZP_03387454.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|289829750|ref|ZP_06547283.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25511802|pir||AB0681 probable ABC transporter membrane protein STY1570 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502663|emb|CAD01819.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137496|gb|AAO69059.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 236

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|223042537|ref|ZP_03612586.1| OpuCB [Staphylococcus capitis SK14]
 gi|314934507|ref|ZP_07841866.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
 gi|222444200|gb|EEE50296.1| OpuCB [Staphylococcus capitis SK14]
 gi|313652437|gb|EFS16200.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
          Length = 211

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 79/201 (39%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           + A++I+++       L +K+ R   V++ I  ++Q+IP L  L  
Sbjct: 10  GQLISKTIEHFYISIIALLIAIVVAVPLGILLSKTTRTANVVLTIAGVLQTIPTLAVLAI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  +    + NI +++ +  +S  ++  Q
Sbjct: 70  MIPIFGVG--------KTPAIVALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTKMQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + +S      +   +  +  G       G+G  +   +     
Sbjct: 122 LMKDVELPLALPLIISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQP 174

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             I+ A + +  +  + D LL
Sbjct: 175 PMIISAAILVTLLALIVDFLL 195



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISIIALLIAIVVAVPLGILLSKTTRTANVVLTIAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T  +  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTKMQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDFLL 195


>gi|312602690|ref|YP_004022535.1| glycine betaine transport system permease [Burkholderia rhizoxinica
           HKI 454]
 gi|312170004|emb|CBW77016.1| Glycine betaine transport system permease protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 337

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 61/146 (41%), Gaps = 10/146 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFL 116
             L  Y     L + +++ ++LL       L   A + R    L+ +L++  ++P     
Sbjct: 135 ADLLYYTGAHLLLVGASIALALLTGIPAGILLSRASNPRHAERLMQVLNVGNTVPS---- 190

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +  + L    +      AI A++ + +  +  + Y+ +  +P    E +R   ++ 
Sbjct: 191 ----LAVLALALAVLGIGAAPAIVALWLASLLPIARNAYEGMRAVPPAWREAARGLGMTS 246

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSG 202
            Q  + + +P +MP ++  +  +++ 
Sbjct: 247 LQSMFKVELPNAMPIIIGGVRTALAI 272



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 9/179 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S    +    +V  + +    ++IG  V    + D+LY        +  V   I +A +
Sbjct: 101 TSRRAKLLSSFIVLTLIVTALVRAIGLDVLCKYHADLLY---YTGAHLLLVGASIALALL 157

Query: 400 IWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
             IP GI +     P  + ++     +    P+     L ++ +            + + 
Sbjct: 158 TGIPAGILLSRASNPRHAERLMQVLNVGNTVPSLAVLALALAVLGIGAA----PAIVALW 213

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
             +   I  N   G  A P  ++E A    +T  +    + LP   P  + G  TA   
Sbjct: 214 LASLLPIARNAYEGMRAVPPAWREAARGLGMTSLQSMFKVELPNAMPIIIGGVRTALAI 272


>gi|187918090|ref|YP_001883653.1| phosphate transport system permease protein PstA [Borrelia hermsii
           DAH]
 gi|119860938|gb|AAX16733.1| phosphate transport system permease protein PstA [Borrelia hermsii
           DAH]
          Length = 513

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 68/163 (41%), Gaps = 8/163 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGF 115
             +      T   +L   +IS+        + A+   ++ L   +   +DI+ SIP + F
Sbjct: 297 GGISYLILNTFYVILLTAIISISTGIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIF 356

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             F +++F+ ++   ++   + +   I       +  +  +SL +IP+  +  S +   +
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +    + +P S PG++  +++++        A  +  +G  
Sbjct: 413 KTETIIKILLPASSPGILTGIVLAIGRA-LGETAVLLFTMGTN 454



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 30/224 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF 433
             + +L   T + +++  II+    I  GI +        +   +     +L++ PA +F
Sbjct: 297 GGISYLILNTFYVILLTAIISISTGIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIF 356

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                   V       L+  +  SL+++      I+        + P  +K  + +    
Sbjct: 357 GLFGLIFFVPIFGMGILSGAITSSLMILPM----IVKTTEESLKSIPKSYKYASFALGAN 412

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  I+LP   P  +TG + A G A     + E A          GL + + E +  
Sbjct: 413 KTETIIKILLPASSPGILTGIVLAIGRA-----LGETAVLLFTMGTNLGLASALNEPSRS 467

Query: 550 GSFPEVVL--------------GVLIMCCFVLALNRFLWHPLYL 579
            +   ++L               +++M   +   ++FL + LY 
Sbjct: 468 LTVHLLLLFQEGYLDKGFATASILIMMILLINLTSKFLINRLYR 511


>gi|312199718|ref|YP_004019779.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311231054|gb|ADP83909.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 282

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 76/223 (34%), Gaps = 21/223 (9%)

Query: 360 AWQSIG---------YIVNHFTYQDVLYVIWL----GCITMFRVVVLIIIASIIWIPVGI 406
           AW+                   +    +   +       T    VV + +  +  +   +
Sbjct: 45  AWEGYVRANHIQPYLLPAPSEIWTQFRHSFRVIVQTSRATGANAVVGLAVGLVAGLLAAV 104

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      + P A  + A P     PL  +  S     P   +  +++F   + +  
Sbjct: 105 VAARSKIADGLLGPLAAAMNAVPIIALAPLFNTMFSTTSAVPRRLVVAIVVF---FPVFV 161

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G    P+  +E+  S  +  WR+ R + LPG  PY  TG   A   A  A++VSE 
Sbjct: 162 NTVRGLRQVPDVQRELMRSLAVGPWRFARTVQLPGAVPYIFTGFRLASSLAVIAAVVSEY 221

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   R  GLG+ I  +    ++P     V   C   L +
Sbjct: 222 FGG-----RQNGLGSRITSAASNTAYPRAWAFVAAACVLGLVV 259



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 15/178 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S+    +L P+   M ++PI+         F               +F       + + 
Sbjct: 108 RSKIADGLLGPLAAAMNAVPIIALAPLFNTMFSTTSAVPRRLVVAIVVF-------FPVF 160

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +  + L  +P    E+ RS  +  W+    + +P ++P +     ++ S      V SE
Sbjct: 161 VNTVRGLRQVPDVQRELMRSLAVGPWRFARTVQLPGAVPYIFTGFRLASSLAVIAAVVSE 220

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTMLGVIFLYDQLLFRPMIVW 266
                       G+GS I  A          A + A   +  V++L   LL      W
Sbjct: 221 YFGG-----RQNGLGSRITSAASNTAYPRAWAFVAAACVLGLVVYLVAGLLEWLATPW 273


>gi|296158591|ref|ZP_06841421.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295891159|gb|EFG70947.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 217

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 82/203 (40%), Gaps = 10/203 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   L Q  ++    +  A+  ++L       L      L   L+ I  ++ ++P +
Sbjct: 7   LSANWPELLQLTAQHVWLVGIAVGCAILVGVPLGILINWHEWLAAPLLSIATVVLTLPSI 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +  F     G      + AI A+F   +  +  + Y +L ++   ++E      
Sbjct: 67  ALFGLMIPVFSRFGQGI---GAVPAITAVFLYSLLPIMRNTYLALRSVDAGIKEAGIGIG 123

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI
Sbjct: 124 MTVWQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIIRAI 176

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
            +  ++ +L   + +  +  + D
Sbjct: 177 GQSSMMKLLVGAVLVSVLAIVAD 199



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 78/202 (38%), Gaps = 8/202 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +   +   ++ L    ++ V + +  A ++ +P+GI I +   +++ +   A ++   P
Sbjct: 5   DYLSANWPELLQLTAQHVWLVGIAVGCAILVGVPLGILINWHEWLAAPLLSIATVVLTLP 64

Query: 430 ANVFFPLVVSCVSYYHLNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S +      +     +   +   I+ N      +     KE      +
Sbjct: 65  SIALFGLMIPVFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRSVDAGIKEAGIGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R + LP   P  + G  TA         ++ V   G       GLG  I  +  
Sbjct: 125 TVWQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIIRAIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           + S  ++++G +++    +  +
Sbjct: 178 QSSMMKLLVGAVLVSVLAIVAD 199


>gi|283456461|ref|YP_003361025.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283103095|gb|ADB10201.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 243

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 77/233 (33%), Gaps = 15/233 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++      L H           +    +     +L      T L      + ++  
Sbjct: 1   MLLLVIWEAWVRLGHVPSTMIAAPSEIAQATVETWP-TLWPATQVTLLEGTVGFLFAVAC 59

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L   SR     L P+L   Q++P++      +++F     GK        I  +
Sbjct: 60  GILIGILLYCSRTANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGK--------IVIV 111

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               ++ +     + L  +P+   +V+ +   +     W++ +  +   +   + +S + 
Sbjct: 112 TVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQIYGGIRVSAAY 171

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +     +E +          G+G ++  A        I  A L ++ +  + 
Sbjct: 172 IFATAATAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATLVIIVITGML 218



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 69/227 (30%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L + W   V    +     +    +   T +    +     +T+    V  + A    I
Sbjct: 2   LLLVIWEAWVRLGHVPSTMIAAPSEIAQATVETWPTLWPATQVTLLEGTVGFLFAVACGI 61

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI +      ++ + P        P     PL +    +      + +++  +F    
Sbjct: 62  LIGILLYCSRTANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGKIVIVTVFGLF---- 117

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I    I G  A P  + +VA +   T      ++ L         G   +    +  + 
Sbjct: 118 PIAVQTIRGLEAVPQFYSDVALTCGATKTWTLWHVKLRVAARQIYGGIRVSAAYIFATAA 177

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            GLG ++  +      P +    L++      L
Sbjct: 178 TAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIVITGML 218


>gi|222151711|ref|YP_002560867.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Macrococcus caseolyticus JCSC5402]
 gi|222120836|dbj|BAH18171.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Macrococcus caseolyticus JCSC5402]
          Length = 230

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 66/212 (31%), Gaps = 15/212 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  YV  L        +  +++A+I+ IP+G+WI     + + +   A ++   P
Sbjct: 12  HYFQDNAGYVFQLFLEHFLISIYGVLLAAIVGIPIGVWIARHRRLVAPVISVANIIQTIP 71

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           A      +++ +          + + +       I+ N   G  A      +      +T
Sbjct: 72  AIA----LLALLMLAMGLGKKTVIMAVFLYALLPIIKNTYTGIKAVDEHIVDAGRGMGMT 127

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + LP      + G   A   A   + +               LG  I   T  
Sbjct: 128 KRQLLTMVELPLSLSVIIAGIRIALVIAIGVTAIGSFIG-------AQSLGDIIIRGTNA 180

Query: 550 GSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
                ++L       +M      +   +   L
Sbjct: 181 TDGTSIILAGALPTALMAVLADIILGLIERRL 212



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 73/195 (37%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               L  +  ++++ +         A+ RRL   ++ + +I+Q+IP         +  + 
Sbjct: 26  LEHFLISIYGVLLAAIVGIPIGVWIARHRRLVAPVISVANIIQTIPA--------IALLA 77

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L    +   +   I A+F   +  +  + Y  +  +   + +  R   ++  Q    + +
Sbjct: 78  LLMLAMGLGKKTVIMAVFLYALLPIIKNTYTGIKAVDEHIVDAGRGMGMTKRQLLTMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  + ++       +V +  +    + I    +G  I       D  +I+ A 
Sbjct: 138 PLSLSVIIAGIRIA-------LVIAIGVTAIGSFIGAQSLGDIIIRGTNATDGTSIILAG 190

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  L D +L
Sbjct: 191 ALPTALMAVLADIIL 205


>gi|83590522|ref|YP_430531.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573436|gb|ABC19988.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 207

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 73/184 (39%), Gaps = 15/184 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  + ++         L  + R L  +++   +++Q+IP L  L   ++ F         
Sbjct: 16  IMGVALAAAGGIPLGILLTRYRWLAKLVMAATEVIQTIPSLAMLALLMMLFGLG------ 69

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +   + ++F   +  +  + Y  L  +   L E  +   ++  Q  W + VP ++P +
Sbjct: 70  --DTTLVVSLFLYALLPIVRNTYTGLLGVDPGLLEAGKGMGMTRSQLIWRVQVPIALPVI 127

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  M ++       +V +  I     +I   G+G+ I   I+ ++   +L   +    + 
Sbjct: 128 LAGMRVA-------LVTAIGIATIGVLIGAGGLGTLIWRGIQTRNNTMVLMGAVPAALLA 180

Query: 253 FLYD 256
            L D
Sbjct: 181 ILTD 184



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 11/180 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + +A+   IP+GI +     ++  +    +++   P+     L++            
Sbjct: 16  IMGVALAAAGGIPLGILLTRYRWLAKLVMAATEVIQTIPSLAMLALLMMLFGLGDTT--- 72

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L + +       I+ N   G         E      +T  +    + +P   P  + G 
Sbjct: 73  -LVVSLFLYALLPIVRNTYTGLLGVDPGLLEAGKGMGMTRSQLIWRVQVPIALPVILAGM 131

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + +  +   G       GLG  I    +  +   V++G +      +  +
Sbjct: 132 RVALVTAIGIATIGVLIGAG-------GLGTLIWRGIQTRNNTMVLMGAVPAALLAILTD 184


>gi|320529045|ref|ZP_08030137.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Selenomonas artemidis F0399]
 gi|320138675|gb|EFW30565.1| ABC transporter, quaternary amine uptake transporter family,
           substrate-binding protein [Selenomonas artemidis F0399]
          Length = 515

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                    SA+ I+L+       L ++  R     + +++ + +IP +  L F + +F 
Sbjct: 22  TLEHLWISASAIGIALVVGGAAGILISRYERAVQPTLGVVNFLYTIPSISMLGFLIPFFG 81

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       AAI A+    +  M  + +  L  + R L E +     +      ++ 
Sbjct: 82  VGNT--------AAIIALTVYALLPMVRATHTGLAQVDRSLVEAAVGMGGTPIYVLAHVE 133

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +          V  +  +    + I   G+G  I   I        +  
Sbjct: 134 LPLALPIIMSGIR-------NMVTMTVALAGIASFIGAGGLGVAIYRGITTNTPALTIAG 186



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 11/181 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           + + L    ++     I IA ++    GI I                L   P+      +
Sbjct: 17  FFLQLTLEHLWISASAIGIALVVGGAAGILISRYERAVQPTLGVVNFLYTIPSISMLGFL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +      +    + L++  +      ++     G +       E A     T      ++
Sbjct: 77  IPFFGVGNTAAIIALTVYALL----PMVRATHTGLAQVDRSLVEAAVGMGGTPIYVLAHV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G         N   ++   +     +   GLG  I       +    + 
Sbjct: 133 ELPLALPIIMSGIR-------NMVTMTVALAGIASFIGAGGLGVAIYRGITTNTPALTIA 185

Query: 558 G 558
           G
Sbjct: 186 G 186


>gi|311103286|ref|YP_003976139.1| binding-protein-dependent transporter inner membrane component
           family protein 1 [Achromobacter xylosoxidans A8]
 gi|310757975|gb|ADP13424.1| binding-protein-dependent transport system inner membrane component
           family protein 1 [Achromobacter xylosoxidans A8]
          Length = 284

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 101/280 (36%), Gaps = 29/280 (10%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIG----IINILLHGIQETTVPRDIVDIVPITL------ 56
               I+RR+   ++ +L   +++G    +  I          P  I     + +      
Sbjct: 18  RRASIARRLRITLWQVLILAIILGSWETLTRIPWFTQNTLFDPFFISQPSRVAVRLWEWL 77

Query: 57  --DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                S+  +   T    +  +++ +   FV     ++SR L  V  P +    S+P + 
Sbjct: 78  QPGPRSVWPHLWLTLQATMVGLLVGVGSGFVVGMTLSRSRFLADVFNPFIVAFNSMPRIA 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F+    ++F      K        +   +    + + F+ Y+   ++ R+L +  R+   
Sbjct: 138 FVPLITMFFGLGLASK--------VVTSWFVVFFLVFFNTYKGGRSVERELVDFCRTLGG 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q  W + +P +       +  ++S     VV +E +          G+G  +  A+ 
Sbjct: 190 SPRQILWRVRIPTAAAWTFAALPNAISFALIGVVLAEFVGSTT------GMGYLMITALA 243

Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             +   +  A+  +  V          L R ++ W+ +FR
Sbjct: 244 TLNATDMFAAVTLLSIVGIALVYCVTWLERRLLHWAPEFR 283



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 66/200 (33%), Gaps = 13/200 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   +V +++       VG+ +     ++    PF     + P   F PL+       
Sbjct: 90  LTLQATMVGLLVGVGSGFVVGMTLSRSRFLADVFNPFIVAFNSMPRIAFVPLITMFFGLG 149

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +    ++ F       FN   G  +   +  +   +   +  +    + +P    
Sbjct: 150 LASKVVTSWFVVFFLVF----FNTYKGGRSVERELVDFCRTLGGSPRQILWRVRIPTAAA 205

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       A   A    +++E          TTG+G  +  +    +  ++   V ++  
Sbjct: 206 WTFAALPNAISFALIGVVLAEFVG------STTGMGYLMITALATLNATDMFAAVTLLSI 259

Query: 565 FVLALNRFL-W--HPLYLYG 581
             +AL   + W    L  + 
Sbjct: 260 VGIALVYCVTWLERRLLHWA 279


>gi|138893951|ref|YP_001124404.1| glycine betaine/L-proline ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265464|gb|ABO65659.1| Glycine betaine/L-proline ABC transporter (permease), putative
           [Geobacillus thermodenitrificans NG80-2]
          Length = 209

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 15/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L    AM I++        +  + R+L   ++ I  I+Q+IP L  L F +  F     
Sbjct: 22  VLLSAIAMGIAIAVAVPLGVVLTRYRKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIG-- 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S
Sbjct: 80  ------KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLS 133

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +        V +  +    T I   G+G  I   ++  D   IL   +  
Sbjct: 134 LPVIMAGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILAGAIPA 186

Query: 249 LGVIFLYDQLL 259
             +  ++D LL
Sbjct: 187 AILAIVFDWLL 197



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA  + +P+G+ +     ++  I   A ++   P+      ++       L   +
Sbjct: 26  AIAMGIAIAVAVPLGVVLTRYRKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIGKLPAII 85

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  +      IL N   G         +      +T  +    + LP   P  + G 
Sbjct: 86  ALTLYALL----PILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++     G       GLG  I           ++ G +      +  +
Sbjct: 142 RTATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILAGAIPAAILAIVFD 194

Query: 571 RFLWH 575
             L  
Sbjct: 195 WLLRK 199


>gi|126729354|ref|ZP_01745168.1| Binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126710344|gb|EBA09396.1| Binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 270

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 21/260 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS------ 60
            P   +    P +  ++A+ +   I        +    P  I D                
Sbjct: 10  RPTAFALAALPFVLVVIAYAVASDIRLTANPADKLLPAPSTIGDTAVRLFTQGDRRTGEI 69

Query: 61  -LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +    + +R+L  + I+   + V          +       + ++  +P L  L   
Sbjct: 70  LLWKDTWASLIRLLGGVAIAATLSLVIGMGIGLLPYVRRTFSGFVAVISMVPPLALLPIL 129

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F           E + +  I       MT  + Q + +IP +    +++   S +  
Sbjct: 130 FIVFGLG--------ETSKVVLIVIGITPFMTRDLSQKVLDIPHEQIVKAQTLGASTFVI 181

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P  +P L+ N+ +S+   W F++A+E +          G+G  I L  +   + 
Sbjct: 182 ALRVALPQVLPRLIANVRLSLGSAWLFLIAAEAVA------SDVGLGYRIFLVRRYLAMD 235

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            IL  +  +  + FL D  L
Sbjct: 236 VILTYVAWITLLAFLIDWGL 255



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 10/186 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R++  + IA+ + + +G+ IG  P++      F  +++  P     P++       
Sbjct: 77  ASLIRLLGGVAIAATLSLVIGMGIGLLPYVRRTFSGFVAVISMVPPLALLPILFIVFGLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L++ G   ++  ++       P++    A +   + +     + LP + P
Sbjct: 137 ETSK----VVLIVIGITPFMTRDLSQKVLDIPHEQIVKAQTLGASTFVIALRVALPQVLP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +     + G AW   I +E  +         GLG  I       +   ++  V  +  
Sbjct: 193 RLIANVRLSLGSAWLFLIAAEAVA------SDVGLGYRIFLVRRYLAMDVILTYVAWITL 246

Query: 565 FVLALN 570
               ++
Sbjct: 247 LAFLID 252


>gi|111223752|ref|YP_714546.1| ABC transporter permease [Frankia alni ACN14a]
 gi|111151284|emb|CAJ62998.1| ABC transporter, permease protein; putative membrane protein
           [Frankia alni ACN14a]
          Length = 277

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 16/206 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L +    +T   L  + +S++     A   +++R +   + P   I+Q+IP L  +
Sbjct: 70  NLAQLLRALWLSTSVALIGLGVSIVLGMAVAIAMSQARWIEKSVYPYAVILQTIPTLALV 129

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +F   +  +VI   L A+F + +S ++         L ++ + + ++ R  R+  
Sbjct: 130 PLIGFWFDYGFLSRVIVCVLIALFPVISSTLF--------GLQSVDQGMLDLFRLHRIPR 181

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI----ALA 232
           W++   L +P +MP       +S        V  +           PGIG  I    A  
Sbjct: 182 WRRLVSLQLPAAMPATFAGFQVSAGLSVVGAVVGDFF----FKQGRPGIGVLIDLYRARL 237

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
           + +Q   A+L A L  + V   +  L
Sbjct: 238 LSQQLFGAVLLASLLGVVVFTFFGWL 263



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 84/266 (31%), Gaps = 21/266 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------ 374
            ++R                  +  +  F ++ GV   ++   +                
Sbjct: 3   ALVRAANRALRTGRPRASWRDRLAPLVLFAILIGVWYFVSLVVLDPDRRFLLPSPDSVVR 62

Query: 375 -------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                  ++  ++    ++    ++ + ++ ++ + V I +     I   + P+A +L  
Sbjct: 63  VAFLDGDNLAQLLRALWLSTSVALIGLGVSIVLGMAVAIAMSQARWIEKSVYPYAVILQT 122

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL+     Y  L+      ++ +    + ++ + + G  +      ++     
Sbjct: 123 IPTLALVPLIGFWFDYGFLS----RVIVCVLIALFPVISSTLFGLQSVDQGMLDLFRLHR 178

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           I  WR    + LP   P    G   + G +   ++V +            G+G  I    
Sbjct: 179 IPRWRRLVSLQLPAAMPATFAGFQVSAGLSVVGAVVGDFF----FKQGRPGIGVLIDLYR 234

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +    ++   VL+     + +  F 
Sbjct: 235 ARLLSQQLFGAVLLASLLGVVVFTFF 260


>gi|152986391|ref|YP_001346603.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961549|gb|ABR83574.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 240

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS---RRLGMVLVP 102
              +    I      L  Y     + + S+M  +LL       L ++     R   ++  
Sbjct: 23  IHWITPATILHYREDLLFYFQAHLVLVFSSMAAALLVGVPAGILLSRPGMQARAERLMQ- 81

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + ++  +IP L  L   +                 AI A+F + +  +  + Y+ L N+ 
Sbjct: 82  LFNVGNTIPPLAVLAIALAIIGIGN--------APAILALFLASLLPIVRNTYEGLRNVS 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             L+E +    ++  Q    + +P +MP +V  + ++++ 
Sbjct: 134 PALKEAATGIGMTPNQVLLRVELPNAMPIIVGGVRVALAL 173



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 8/133 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           +  V   +  A ++ +P GI +   G +      +Q    +    P      + ++ +  
Sbjct: 46  LVLVFSSMAAALLVGVPAGILLSRPGMQARAERLMQ-LFNVGNTIPPLAVLAIALAIIGI 104

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N    L +   +   I+ N   G        KE A+   +T  +    + LP   
Sbjct: 105 G----NAPAILALFLASLLPIVRNTYEGLRNVSPALKEAATGIGMTPNQVLLRVELPNAM 160

Query: 504 PYYVTGAITACGG 516
           P  V G   A   
Sbjct: 161 PIIVGGVRVALAL 173


>gi|70725608|ref|YP_252522.1| hypothetical protein SH0607 [Staphylococcus haemolyticus JCSC1435]
 gi|68446332|dbj|BAE03916.1| opuCB [Staphylococcus haemolyticus JCSC1435]
          Length = 211

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +K++R+  V++ I  ++Q+IP L  L   +  F           +  AI 
Sbjct: 32  VVAVPLGILLSKTKRIANVVLTIAGVLQTIPTLAVLAIMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ +   S  ++  Q    + +P ++P ++  + +S 
Sbjct: 84  ALFIYVLLPILNNTVLGVQNIDKNIIQAGTSMGMTKMQLMKDVELPLALPLIISGIRLSS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  +  G       G+G  +   +       I+ A + +  +  L D +L
Sbjct: 144 VYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTCLALLVDFIL 195



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 72/187 (38%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +     I++ +   A +L   P      +++        
Sbjct: 20  FYISIIALLIAIVVAVPLGILLSKTKRIANVVLTIAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +  +S  +T  +  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVQNIDKNIIQAGTSMGMTKMQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++ C  
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTCLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LLVDFIL 195


>gi|26987605|ref|NP_743030.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida KT2440]
 gi|24982283|gb|AAN66494.1|AE016278_5 glycine betaine/carnitine/choline ABC transporter, permease
           protein, putative [Pseudomonas putida KT2440]
          Length = 217

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
             LD   + Q   +  + +  A+ +++L       L  +   +   L     ++ +IP +
Sbjct: 8   AHLDWAQVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPAVAGPLQASATVLLTIPSI 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 + ++     G      L AI A+F   +  +  + Y +L N+   + E +R   
Sbjct: 68  ALFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPILRNTYLALTNVEPGIREAARGIG 124

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I
Sbjct: 125 MTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTSI 177

Query: 234 KEQDLLAILYAMLTM 248
              D+  +L   + +
Sbjct: 178 SRSDMSMLLVGAVLV 192



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F + D   V+ L    +  V + + +A ++ +P+GI +   P ++  +Q  A +L 
Sbjct: 3   LLDTFAHLDWAQVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPAVAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   IL N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPILRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           S  +     +++G +++ 
Sbjct: 176 SISRSDMSMLLVGAVLVS 193


>gi|311063643|ref|YP_003970368.1| ABC transporter substrate-binding protein [Bifidobacterium bifidum
           PRL2010]
 gi|310865962|gb|ADP35331.1| Solute binding protein of ABC transporter system [Bifidobacterium
           bifidum PRL2010]
          Length = 261

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 91/246 (36%), Gaps = 15/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P  F +   ++V  I     H I +  +         I      L +  + TT   +
Sbjct: 10  RVAPPAFTVGGLLIVWEIAVDAGH-ISQRVLASPSQIAASIVKTWPDLWEATAITTYEAI 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I+ +   +       S+ L   + P+L   Q+IP++      +++F          
Sbjct: 69  TGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFG--------F 120

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +    V+ +     + +  +P+  E+V+ +   +     W++ +  +   + 
Sbjct: 121 EPLGKIVIVAVFGVFPVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVF 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +   V +E +   +      G+G ++  A        I  A + ++ +  
Sbjct: 181 GGLRISAAYVFGTAVTAEYLGAMN------GLGIWLQAAFNSFRTPLIFSATIMVVALTA 234

Query: 254 LYDQLL 259
           L   ++
Sbjct: 235 LLLTII 240



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 74/239 (30%), Gaps = 10/239 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F ++         L I W   V    I     +    +     +    +     IT +  
Sbjct: 8   FARVAPPAFTVGGLLIVWEIAVDAGHISQRVLASPSQIAASIVKTWPDLWEATAITTYEA 67

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +IA++  + +GI +     +   I P        P     PL +    +  L   +
Sbjct: 68  ITGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFGFEPLGKIV 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++  +F     +      G  A P  +++VA +   T      ++ L         G 
Sbjct: 128 IVAVFGVF----PVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVFGGL 183

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +    +  ++ +E            GLG ++  +      P +    +++      L
Sbjct: 184 RISAAYVFGTAVTAEYLG------AMNGLGIWLQAAFNSFRTPLIFSATIMVVALTALL 236


>gi|222086797|ref|YP_002545331.1| nitrate/sulfonate ABC transporter [Agrobacterium radiobacter K84]
 gi|221724245|gb|ACM27401.1| nitrate/sulfonate ABC transporter [Agrobacterium radiobacter K84]
          Length = 295

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL   A  T            +   ++A        L   L+P +   Q+IPIL  
Sbjct: 85  TSNRSLVYNAWVTLAPTAVGFAFGTVLGILFAVGIVHMVALDRSLMPWIIASQTIPILAI 144

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V F  L    +I   L + +  F    + +T  M + L +      ++ R++  S
Sbjct: 145 APTIIVVFSALGIDGLIPKALISTYLSF----FPVTVGMTKGLRSPEVMHLDLMRTYNAS 200

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L VP S+P L  +M ++++      +  E+         + GIG+ +      
Sbjct: 201 ASQTFWKLRVPASIPFLFTSMKVAIAASLVGTIVGEL-----PTGAVAGIGAKLLAGSYY 255

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              + I  A++    +  +   ++
Sbjct: 256 SQTIDIWAALVAGSVLAAILVAIV 279



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 68/192 (35%), Gaps = 5/192 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+    V     +++ I   + I     +   + P+       P     P +
Sbjct: 89  SLVYNAWVTLAPTAVGFAFGTVLGILFAVGIVHMVALDRSLMPWIIASQTIPILAIAPTI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   S   ++  +  +L+  + + + +   +  G  +      ++  +++ +  + +  +
Sbjct: 149 IVVFSALGIDGLIPKALISTYLSFFPVTVGMTKGLRSPEVMHLDLMRTYNASASQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P+  T    A   +   +IV E+ +         G+GA +   +      ++  
Sbjct: 209 RVPASIPFLFTSMKVAIAASLVGTIVGELPTGA-----VAGIGAKLLAGSYYSQTIDIWA 263

Query: 558 GVLIMCCFVLAL 569
            ++        L
Sbjct: 264 ALVAGSVLAAIL 275


>gi|188584762|ref|YP_001916307.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349449|gb|ACB83719.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 281

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 66/175 (37%), Gaps = 17/175 (9%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            + +  A + ++L +     L  +   R L   +   +++ Q++P +  L     +    
Sbjct: 84  IILVGLATLGAILTSVPLGILITRPTFRWLTPFVDNPVNVGQTVPSIAILGLAYYFMGTG 143

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                    L A+FA++   +  +  +    + ++  ++ E +R   ++ ++ F  +  P
Sbjct: 144 L--------LTALFALWLYSLLPILRNTSIGIKSVDPEILEAARGMGMTPYRIFIKIEFP 195

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            ++P ++  +  S       VV         T I    +G  I   +  + +  +
Sbjct: 196 LALPVIMAGIRTS-------VVICTGAATLATFIGAGALGEIINAGLSMRRIQLV 243



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 10/188 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQD-VLYVIWLGCITMFR---VVVLIIIASIIWIPV 404
              +  + +G  +  I       +  +  L    +G +       V +  + A +  +P+
Sbjct: 42  LIPILYITLGTVYTVINVQNPVDSLAEGWLSYERIGGLLYEHIILVGLATLGAILTSVPL 101

Query: 405 GIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           GI I       ++  +     +    P+     L    +    L         +   +  
Sbjct: 102 GILITRPTFRWLTPFVDNPVNVGQTVPSIAILGLAYYFMGTGLLT----ALFALWLYSLL 157

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N   G  +   +  E A    +T +R +  I  P   P  + G  T+      A+ 
Sbjct: 158 PILRNTSIGIKSVDPEILEAARGMGMTPYRIFIKIEFPLALPVIMAGIRTSVVICTGAAT 217

Query: 523 VSEVASWG 530
           ++     G
Sbjct: 218 LATFIGAG 225


>gi|300710337|ref|YP_003736151.1| binding-protein-dependent transport systems inner membrane
           component [Halalkalicoccus jeotgali B3]
 gi|299124020|gb|ADJ14359.1| binding-protein-dependent transport systems inner membrane
           component [Halalkalicoccus jeotgali B3]
          Length = 261

 Score = 73.8 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 76/252 (30%), Gaps = 10/252 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    I  H       L        +    W+ +     I          V      D  
Sbjct: 2   REGARIARHTRPGARHLVLPAGALVVAVALWWGLTLVAGIPSFLLPPPDAVAARLLGDPE 61

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   T+ +V    +I   +   + + + + P     I P+       P     P++
Sbjct: 62  LYARNALFTLEKVTYGGMIGIAVGFVLALGVAYLPWFRRAIYPYLVTARVLPKIAIAPVL 121

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +   + +     + +  +  AG S  P    ++  S +    R   Y+
Sbjct: 122 LIYLGTG----TITAVVFVALIAFFPVALSTAAGLSKAPAGHHDLLESVNAGRIRRVLYV 177

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P    G   A   +   ++++E  +         GLG  I  ++E      ++ 
Sbjct: 178 DLPYALPDAFAGLKQAVTLSVVGAVIAEWIA------ADNGLGFVILIASENVRTDVMLA 231

Query: 558 GVLIMCCFVLAL 569
            + ++    LAL
Sbjct: 232 ALAVLILEGLAL 243



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 89/262 (33%), Gaps = 19/262 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           P     + P    ++A  L  G+   L+ GI    +P        +  D     + A  T
Sbjct: 13  PGARHLVLPAGALVVAVALWWGLT--LVAGIPSFLLPPPDAVAARLLGDPELYARNALFT 70

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             ++    +I +   FV A   A        + P L   + +P +      ++Y      
Sbjct: 71  LEKVTYGGMIGIAVGFVLALGVAYLPWFRRAIYPYLVTARVLPKIAIAPVLLIYLGTG-- 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  + A+  +     + +  S    L   P    ++  S      ++  Y+ +P++
Sbjct: 129 ------TITAVVFVALIAFFPVALSTAAGLSKAPAGHHDLLESVNAGRIRRVLYVDLPYA 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P     +  +++      V +E I   +      G+G  I +A +      +L A+  +
Sbjct: 183 LPDAFAGLKQAVTLSVVGAVIAEWIAADN------GLGFVILIASENVRTDVMLAALAVL 236

Query: 249 LGVIFLY---DQLLFRPMIVWS 267
           +           L+ R  I WS
Sbjct: 237 ILEGLALYGAVTLVQRATIHWS 258


>gi|330952904|gb|EGH53164.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae Cit 7]
          Length = 237

 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 17/193 (8%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPIL 104
             + I  I      L  Y     + +L +M+ +L+         ++   +G     + I 
Sbjct: 24  HWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALSRPSMVGRAERFMQIF 83

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+   
Sbjct: 84  NIGNTVPPLAVLAIALGILGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGS 135

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L+E +    ++  Q  W + +P ++P +V  + ++++       A    ++G        
Sbjct: 136 LKEAAVGIGMTPRQVLWRVELPNAVPIIVGGVRVALAI--NVGTAPLAFLIGANS----- 188

Query: 225 IGSYIALAIKEQD 237
           +GS I   I   +
Sbjct: 189 LGSLIFPGIALNN 201



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 8/141 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFP 435
           +++     +  V+V ++ A ++ IP GI +            +Q    +    P      
Sbjct: 38  LLFYLQAHLILVLVSMLAALVVGIPAGIALSRPSMVGRAERFMQ-IFNIGNTVPPLAVLA 96

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + +  +              +   +   I+ N   G        KE A    +T  +   
Sbjct: 97  IALGILGIGSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLW 152

Query: 496 YIILPGIFPYYVTGAITACGG 516
            + LP   P  V G   A   
Sbjct: 153 RVELPNAVPIIVGGVRVALAI 173


>gi|304395964|ref|ZP_07377846.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304356333|gb|EFM20698.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 238

 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    +  +M+ +LL       L ++   RR    ++ I ++  ++P L  L  
Sbjct: 40  LLYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V                A+ A+F + +  +  + +  L  +P  L E +    ++ WQ
Sbjct: 100 AMVIIGIGDRP--------ALIALFLASLLPIVRNTFSGLSAVPPSLIEAANGIGMTKWQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 152 RLRQVELPNALPVILAGVRIA--TAINVGTAPLAFLIGASSF-----GELIFPGIYLNDF 204

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++   +    V  + D LL
Sbjct: 205 PTLILGAVATALVALVLDMLL 225



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 13/197 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPL 436
           +++LG   +F V   ++ A ++ IP GI +        +  +     +    P      L
Sbjct: 40  LLYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +            + +   +   I+ N  +G SA P    E A+   +T W+  R 
Sbjct: 100 AMVIIGIGDR----PALIALFLASLLPIVRNTFSGLSAVPPSLIEAANGIGMTKWQRLRQ 155

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P  + G   A       + ++ +          +  G  I        FP ++
Sbjct: 156 VELPNALPVILAGVRIATAINVGTAPLAFLIG-------ASSFGELIFPGIYLNDFPTLI 208

Query: 557 LGVLIMCCFVLALNRFL 573
           LG +      L L+  L
Sbjct: 209 LGAVATALVALVLDMLL 225


>gi|300814329|ref|ZP_07094601.1| putative aliphatic sulfonates transport permease protein SsuC
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511596|gb|EFK38824.1| putative aliphatic sulfonates transport permease protein SsuC
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 250

 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 14/177 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   SL  + S +  R+     I+    F  +  +   +        ++  ++++P L  
Sbjct: 46  LKDGSLFVHVSTSLTRVFIGYFIAFFLAFFLSIASLIFKSFDKYFDWLIQFLRNVPPLSL 105

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   +++F           E   I  I  +  + M  ++ +        L EV ++F  S
Sbjct: 106 IPLLILWFGIG--------EKTKIIIIILASFFPMYLNINKGFKMTDVKLIEVGKAFNFS 157

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + F+ + +P+++  ++  M + +   +  ++ +EMI          G+G  I  A
Sbjct: 158 KLKLFFKIRLPYALNDILVGMRIGLGYSYRAIIGAEMIASST------GLGYMINFA 208



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 13/225 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---YVIWLGCITMF 388
           +++     +S+   IF +  +  + I   +    + +   ++  +L    +      ++ 
Sbjct: 1   MKVNFKGLISFFAIIFLWYFLTKIGIYSTYLLPTFPMIWESFFQMLKDGSLFVHVSTSLT 60

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           RV +   IA  +   + I                Q L   P     PL++          
Sbjct: 61  RVFIGYFIAFFLAFFLSIASLIFKSFDKYFDWLIQFLRNVPPLSLIPLLILWFGIGEKTK 120

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                +++I  + + +  N+  G         EV  +F+ +  + +  I LP      + 
Sbjct: 121 ----IIIIILASFFPMYLNINKGFKMTDVKLIEVGKAFNFSKLKLFFKIRLPYALNDILV 176

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           G     G ++ A I +E+ +       +TGLG  I  +       
Sbjct: 177 GMRIGLGYSYRAIIGAEMIA------SSTGLGYMINFARSLSQTD 215


>gi|238794099|ref|ZP_04637716.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           intermedia ATCC 29909]
 gi|238726604|gb|EEQ18141.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           intermedia ATCC 29909]
          Length = 384

 Score = 73.8 bits (180), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+ ++ ++L          +S      +   L+I+Q+IP +      +     L     
Sbjct: 184 LLATLIPAILLGIPLGLFCFRSHHFQSTIFSTLNIIQTIPSIALFGLLIAPLAGLAAAIP 243

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L ++P  + E +R   ++  Q F+ +
Sbjct: 244 WLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLESVPDSVVESARGMGMTRSQLFFLV 303

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP ++  + +         V +  + V   +I   G+G+ +   +    L  +L 
Sbjct: 304 QIPIAMPLILSGIRI-------VAVQTVGLAVVAALIGAGGLGAIVFQGLLSSALDLVLL 356

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 357 GVIPVIVMAVVVDSLF 372



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 77/199 (38%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  +I A ++ IP+G++     H  S I     ++   P+   F L+++ ++    
Sbjct: 181 LHILLATLIPAILLGIPLGLFCFRSHHFQSTIFSTLNIIQTIPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  + P+   E A    +T  + +
Sbjct: 241 AIPWLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLESVPDSVVESARGMGMTRSQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FLVQIPIAMPLILSGIRIVAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVIVMAVVVDSLF 372


>gi|302335424|ref|YP_003800631.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Olsenella uli DSM 7084]
 gi|301319264|gb|ADK67751.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Olsenella uli DSM 7084]
          Length = 521

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 59/157 (37%), Gaps = 15/157 (9%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V+  L A+  R     + +++ + +IP +  L F + +               A+ A+
Sbjct: 46  GGVFGLLIAERPRAAKPTLGVVNFLYTIPSISMLGFLIPFSGVGN--------ATAVIAL 97

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  M  + +  + N+   L E +     +  Q    + +P ++P ++  +  SM+ 
Sbjct: 98  TIYALLPMVRNTHTGITNVDPALVEAACGMGSTDGQILRRIKIPLALPYIMSGIR-SMAT 156

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                VA   +    + I   G+G  I   I   ++ 
Sbjct: 157 ---MTVA---LAGIASFIGAGGLGVAIYRGITTNNVA 187



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 46/149 (30%), Gaps = 11/149 (7%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+ I  RP  +         L   P+      ++      +    + L++  +      +
Sbjct: 50  GLLIAERPRAAKPTLGVVNFLYTIPSISMLGFLIPFSGVGNATAVIALTIYALL----PM 105

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + N   G +       E A     T  +  R I +P   PY ++G  +        + ++
Sbjct: 106 VRNTHTGITNVDPALVEAACGMGSTDGQILRRIKIPLALPYIMSGIRS-------MATMT 158

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +     +   GLG  I       +  
Sbjct: 159 VALAGIASFIGAGGLGVAIYRGITTNNVA 187


>gi|311277868|ref|YP_003940099.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308747063|gb|ADO46815.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 290

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G   GI  +   ++ +   Y  +   IW   +T+   ++   +  I  I  G+ +G  P
Sbjct: 60  FGSPKGIVLRLWDWVQHGTAYGSIWLQIW---VTLEESLMGFAVGVIGGILFGVLLGEIP 116

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
           +++    P+ +++ A P  V   + V  +     +  +  ++L+ F       FN   G 
Sbjct: 117 YLADVFGPYIKIVNALPRIVLGSIFVMWLGLGMSSKVVLAAVLVFFVVF----FNAFQGV 172

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            +   +    A     + +    +++ P    + +     A G +   +IV E       
Sbjct: 173 RSVDRNLVSNARILGASRFDVVLHVVFPSAMTWIIASLHVALGFSIIGAIVGEFLG---- 228

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                GLG  IA +        V   +LI+    L+    +
Sbjct: 229 --AQKGLGLVIATAQNTFDANGVFGAMLIIGAIALSAEVLM 267



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    L    + ++   ++  L  +   L  V  P + I+ ++P +   +  V++     
Sbjct: 90  TLEESLMGFAVGVIGGILFGVLLGEIPYLADVFGPYIKIVNALPRIVLGSIFVMWLGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV+ A +   F +         F+ +Q + ++ R+L   +R    S +    ++  P 
Sbjct: 150 SSKVVLAAVLVFFVV--------FFNAFQGVRSVDRNLVSNARILGASRFDVVLHVVFPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +M  ++ ++ +++    F ++ +   +VG+ +    G+G  IA A    D   +  AML 
Sbjct: 202 AMTWIIASLHVALG---FSIIGA---IVGEFLGAQKGLGLVIATAQNTFDANGVFGAMLI 255

Query: 248 MLGVIF---LYDQLLFRPMIVWSNKFRLERTTGI 278
           +  +     +   L+ + ++ W      E  T  
Sbjct: 256 IGAIALSAEVLMSLIEKRLLSWQPPSAAESNTPG 289


>gi|187477152|ref|YP_785176.1| ABC transporter permease [Bordetella avium 197N]
 gi|115421738|emb|CAJ48249.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 258

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +  +L    L  +   T   ML  +++            A+S  L  +L 
Sbjct: 40  LPAPSAVALTLWNSLASGYLWPHIGVTLAEMLLGLLLGGAAGLGMGIALAESPLLDGLLK 99

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q +P L      V++F       VI   L   F         +  +   +L  +
Sbjct: 100 PYVILSQVVPKLALAPLFVLWFGFGMLPTVIMTALICFF--------PLMENTLTALRQV 151

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +  ++      S  Q    L +P  +PG++  + +++       V  E I        
Sbjct: 152 DANRLQLFAMLGASRTQTLLRLKLPAGLPGILAGLRVALVLALVGAVVGEFIGASS---- 207

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G+ I  A    D   +  A+  +  +  L  Q
Sbjct: 208 --GLGAVIIAAQGMMDTPLMFAALTAIALIGLLCYQ 241



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +V      +A      + + + +  +        +T+  +++ +++     + +GI + 
Sbjct: 37  ALVLPAPSAVALTLWNSLASGYLWPHIG-------VTLAEMLLGLLLGGAAGLGMGIALA 89

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P +   ++P+  L    P     PL V    +      L   ++      + ++ N +
Sbjct: 90  ESPLLDGLLKPYVILSQVVPKLALAPLFVLWFGFG----MLPTVIMTALICFFPLMENTL 145

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                   +  ++ +    +  +    + LP   P  + G   A   A   ++V E    
Sbjct: 146 TALRQVDANRLQLFAMLGASRTQTLLRLKLPAGLPGILAGLRVALVLALVGAVVGEFIG- 204

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 ++GLGA I  +      P +   +  +    L  
Sbjct: 205 -----ASSGLGAVIIAAQGMMDTPLMFAALTAIALIGLLC 239


>gi|148654833|ref|YP_001275038.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148566943|gb|ABQ89088.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 272

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 18/258 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           + FP    L A V    +I   L        P   +     +     L ++ + T    +
Sbjct: 28  QAFPPFVLLSALVAAWELIVWQLALPAWLLPPPSRILTTLFSNLPI-LGEHVAATLTVTI 86

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               ++L+  F    L   S  L   + P+L   Q++PI+      VV F      KV+ 
Sbjct: 87  PGFGLALVTGFALGVLIDASPLLRRAVYPLLVTSQTVPIVAIAPLLVVGFGFGMLPKVLV 146

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L   F         +  +    L    RD   +  +   + WQ    L +P ++P + 
Sbjct: 147 VALVTFF--------PIVVNTADGLQAADRDQRRLLEAMGANYWQLLRLLRLPAALPSIF 198

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLG 250
             + ++++      V +E I          G+G YIA +++      +  A L    +  
Sbjct: 199 TGIKVAITYSVIGAVLAEWIGASA------GLGVYIARSLRAFRTDQVFVAALVTSLLTI 252

Query: 251 VIFLYDQLLFRPMIVWSN 268
           V+F    LL R ++ W +
Sbjct: 253 VLFALVTLLERWIVSWRD 270



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   W  +V  +A+          +    + ++  +      T+   +    +A +   
Sbjct: 38  ALVAAWELIVWQLALPAWLLPPPSRILTTLFSNLPILGEHVAATLTVTIPGFGLALVTGF 97

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ I   P +   + P        P     PL+V    +      L   L++   T +
Sbjct: 98  ALGVLIDASPLLRRAVYPLLVTSQTVPIVAIAPLLVVGFGFG----MLPKVLVVALVTFF 153

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ N   G  A   D + +  +     W+  R + LP   P   TG   A   +   ++
Sbjct: 154 PIVVNTADGLQAADRDQRRLLEAMGANYWQLLRLLRLPAALPSIFTGIKVAITYSVIGAV 213

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E          + GLG YIA S       +V +  L+     + L
Sbjct: 214 LAEWIG------ASAGLGVYIARSLRAFRTDQVFVAALVTSLLTIVL 254


>gi|15904045|ref|NP_359595.1| ABC transporter permease [Streptococcus pneumoniae R6]
 gi|225855692|ref|YP_002737204.1| ABC transporter, permease protein [Streptococcus pneumoniae JJA]
 gi|225857768|ref|YP_002739279.1| ABC transporter, permease protein [Streptococcus pneumoniae P1031]
 gi|15459708|gb|AAL00806.1| ABC transporter membrane-spanning permease - unknown substrate
           [Streptococcus pneumoniae R6]
 gi|225723667|gb|ACO19520.1| ABC transporter, permease protein [Streptococcus pneumoniae JJA]
 gi|225726284|gb|ACO22136.1| ABC transporter, permease protein [Streptococcus pneumoniae P1031]
          Length = 253

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 85/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 10  RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|325497945|gb|EGC95804.1| putative transporter subunit: permease component of ABC superfamily
           [Escherichia fergusonii ECD227]
          Length = 385

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  IP D+ E + +  L+G
Sbjct: 237 GLVTAFPWLGTLGVAGTGMTPALIALVLYALLPLVRGVVVGLNQIPHDVLESATAMGLNG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLNSGTLNDLSLLKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAGLVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P+D  E A++  + G + + +
Sbjct: 243 PWLGTLGVAGTGMTPALIALVLYALLPLVRGVVVGLNQIPHDVLESATAMGLNGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|322375501|ref|ZP_08050014.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C300]
 gi|321279764|gb|EFX56804.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C300]
          Length = 305

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|332522927|ref|ZP_08399179.1| choline transport system permease protein opuBB [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314191|gb|EGJ27176.1| choline transport system permease protein opuBB [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 212

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L       T     A++  +L      T   +  RL  +++ +  ++Q+IP L  L  
Sbjct: 10  GRLLFKTWEQTYISALALLFGILLAVPLGTALTRFPRLAKIIIALTSMLQTIPSLALLAM 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F           +  AI A+F   +  +  + Y  L ++  +L++ +    +   Q
Sbjct: 70  MIPLFGVG--------KTPAIVALFIYSLLPILRNTYVGLNSVDPNLKDSAEGMGMFPVQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +MP ++  + +S      +   +  I  G       G+G  I   +     
Sbjct: 122 SIFLVELPLAMPVIMAGVRLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQP 174

Query: 239 LAILYAMLTML 249
             I+   + ++
Sbjct: 175 ELIIGGTIPVI 185



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++   ++ +P+G  +   P ++  I     +L   P+     +++            
Sbjct: 24  ALALLFGILLAVPLGTALTRFPRLAKIIIALTSMLQTIPSLALLAMMIPLFGVG----KT 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G ++   + K+ A    +   +    + LP   P  + G 
Sbjct: 80  PAIVALFIYSLLPILRNTYVGLNSVDPNLKDSAEGMGMFPVQSIFLVELPLAMPVIMAGV 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             +       + ++     G       GLG  I           ++ G +
Sbjct: 140 RLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPELIIGGTI 182


>gi|270292471|ref|ZP_06198682.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M143]
 gi|315613426|ref|ZP_07888334.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|331266102|ref|YP_004325732.1| ABC transporter membrane-spanning permease,phosphate transport
           [Streptococcus oralis Uo5]
 gi|270278450|gb|EFA24296.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M143]
 gi|315314422|gb|EFU62466.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|326682774|emb|CBZ00391.1| ABC transporter membrane-spanning permease,phosphate transport
           [Streptococcus oralis Uo5]
          Length = 305

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|326329658|ref|ZP_08195980.1| putative ABC transporter, membrane spanning protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325952654|gb|EGD44672.1| putative ABC transporter, membrane spanning protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 270

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 87/257 (33%), Gaps = 23/257 (8%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                   +     R + +       +V  V +  AW  I  + +   +   L  I    
Sbjct: 5   APESRATTEPGHRNRGNSVAGRVISPIVLAVLVVAAWWIIAVLADSAVFPTPLESIQSLA 64

Query: 385 ITMFR-------------VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
             + R             ++   + A ++   +G+ +G  P  S+ I P    L + P  
Sbjct: 65  EDLGRPRYVDSIIDSVRVLLFAYVAAGVVGAFLGMVLGLSPFWSAAILPIVYALNSIPKI 124

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             +P+ +  +     +                +   V+   +A      ++A+S ++   
Sbjct: 125 TLYPIFLLFLGIGDFSRGT----FAFVSGVLPMFLIVVEATAAVQRLHLKLAASLNLDWP 180

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +   YI++P + P  V+      G  +   +++E+ S       ++GLG  I  +     
Sbjct: 181 KLLTYIVIPSVLPALVSALRLTFGLTFLGLLLAEMFSG------SSGLGFEILRNVTLAR 234

Query: 552 FPEVVLGVLIMCCFVLA 568
              ++  V+++    L 
Sbjct: 235 MENILGEVMLIAVMALI 251



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 15/249 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++ R+   I   +  V    II +L       T P + +  +   L           +  
Sbjct: 23  VAGRVISPIVLAVLVVAAWWIIAVLADSAVFPT-PLESIQSLAEDLGRPRYVDSIIDSVR 81

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
            +L A V + +       +   S      ++PI+  + SIP +      +++       +
Sbjct: 82  VLLFAYVAAGVVGAFLGMVLGLSPFWSAAILPIVYALNSIPKITLYPIFLLFLGIGDFSR 141

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A        F S V  M   + ++   + R   +++ S  L   +   Y+ +P  +P
Sbjct: 142 GTFA--------FVSGVLPMFLIVVEATAAVQRLHLKLAASLNLDWPKLLTYIVIPSVLP 193

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            LV  + ++    +  ++ +EM           G+G  I   +    +  IL  ++ +  
Sbjct: 194 ALVSALRLTFGLTFLGLLLAEMFSGSS------GLGFEILRNVTLARMENILGEVMLIAV 247

Query: 251 VIFLYDQLL 259
           +  +   LL
Sbjct: 248 MALIPTLLL 256


>gi|313891142|ref|ZP_07824761.1| choline transport system permease protein opuBB [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120505|gb|EFR43625.1| choline transport system permease protein opuBB [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 212

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L       T     A++  +L      T+  +  RL  +++ +  ++Q+IP L  L   +
Sbjct: 12  LLFKTWEQTYISALALLFGILLAVPLGTVLTRFPRLAKIIIALTSMLQTIPSLALLAMMI 71

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F           +  AI A+F   +  +  + Y  L N+  +L++ ++   +   Q  
Sbjct: 72  PLFGVG--------KTPAIVALFIYSLLPILRNTYVGLNNVDPNLKDSAQGMGMLPIQSI 123

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P +MP ++  + +S      +   +  I  G       G+G  I   +       
Sbjct: 124 FLVELPLAMPVIMAGVRLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPEL 176

Query: 241 ILYAMLTML 249
           I+   + ++
Sbjct: 177 IIGGTIPVI 185



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 54/170 (31%), Gaps = 11/170 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++   ++ +P+G  +   P ++  I     +L   P+     +++            
Sbjct: 24  ALALLFGILLAVPLGTVLTRFPRLAKIIIALTSMLQTIPSLALLAMMIPLFGVG----KT 79

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   IL N   G +    + K+ A    +   +    + LP   P  + G 
Sbjct: 80  PAIVALFIYSLLPILRNTYVGLNNVDPNLKDSAQGMGMLPIQSIFLVELPLAMPVIMAGV 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             +       + ++     G       GLG  I           ++ G +
Sbjct: 140 RLSAIYVIAWATLASYIGAG-------GLGDLIFSGLNLFQPELIIGGTI 182


>gi|269793559|ref|YP_003313014.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269095744|gb|ACZ20180.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 308

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 82/263 (31%), Gaps = 17/263 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWL 382
               +L    R S  L      VV  +A         Y++   +       +D       
Sbjct: 47  RRRSRLPRGLRPSTWLPTTVSVVVVALAWSWVAAENKYLLPPLSAVGELLVEDSALFASN 106

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+   +V + I       + + +     +   I P A +L   P     P +V    
Sbjct: 107 AWATLQIAIVGLGIGFGAAFVLAVVMSEIGVLRRAIMPLAIVLNVTPVVALAPALVVAFG 166

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +          ++    T + +L NV  G  + P     V S+ H +       + +P  
Sbjct: 167 FG----MTPKVIVTAIITFFPVLINVTTGLRSVPVPVLHVFSTLHASRLEVLLRLRMPSA 222

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV--- 559
            P+ +         +   ++V+E  + G     ++GLG  I  S       ++   +   
Sbjct: 223 LPFTLAALRVVLPLSIVGAVVAEFVAPG----SSSGLGTMIKTSAANSQLAQLYAAIAWL 278

Query: 560 LIMCCFVLALNRFLWHPLYLYGT 582
             M   +L L   +   L  +  
Sbjct: 279 AAMGVVMLLLITVVEKRLLFWHE 301



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 94/267 (35%), Gaps = 16/267 (5%)

Query: 6   ILPPFISRRIFPNIF-DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
                + R + P+ +      V+V+ +    +    +  +P        +  D       
Sbjct: 47  RRRSRLPRGLRPSTWLPTTVSVVVVALAWSWVAAENKYLLPPLSAVGELLVEDSALFASN 106

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T    +  + I     FV A + ++   L   ++P+  ++   P++      VV F 
Sbjct: 107 AWATLQIAIVGLGIGFGAAFVLAVVMSEIGVLRRAIMPLAIVLNVTPVVALAPALVVAFG 166

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                KVI   +   F         +  ++   L ++P  +  V  +   S  +    L 
Sbjct: 167 FGMTPKVIVTAIITFF--------PVLINVTTGLRSVPVPVLHVFSTLHASRLEVLLRLR 218

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P  +  + + +       V +E +  G +     G+G+ I  +     L  +  A
Sbjct: 219 MPSALPFTLAALRVVLPLSIVGAVVAEFVAPGSSS----GLGTMIKTSAANSQLAQLYAA 274

Query: 245 M---LTMLGVIFLYDQLLFRPMIVWSN 268
           +     M  V+ L   ++ + ++ W  
Sbjct: 275 IAWLAAMGVVMLLLITVVEKRLLFWHE 301


>gi|154174647|ref|YP_001408929.1| abcb protein [Campylobacter curvus 525.92]
 gi|112802559|gb|EAT99903.1| abcb protein [Campylobacter curvus 525.92]
          Length = 265

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 89/193 (46%), Gaps = 10/193 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+FR VV + ++ ++ I +G+  G+    ++ ++PF  +L + P  ++  L +   S+ 
Sbjct: 74  LTLFRAVVGVGVSCVVGITLGLIAGYYKSFAAFLKPFITILLSMPPIIWVVLALFWFSFG 133

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +++    + +  I  T      + + G  +     KE+  ++ +   +  R++ LP +  
Sbjct: 134 NVSTIFTIIITSIPLTF----ASSMVGMMSVNEQLKEMFDAYDLGILKKIRHLYLPHLTS 189

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y ++    A G      I++E+         + G+G+ IA++      P V+  V+++  
Sbjct: 190 YIISSLSVAVGMGVKIVIMAELLG------ASDGVGSKIADARVMLDTPSVMAYVVLVIT 243

Query: 565 FVLALNRFLWHPL 577
            V+     +  PL
Sbjct: 244 LVMLFEYLIIEPL 256



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 86/196 (43%), Gaps = 14/196 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R +  + +S +       +A   +     L P + I+ S+P + ++   + +F    
Sbjct: 75  TLFRAVVGVGVSCVVGITLGLIAGYYKSFAAFLKPFITILLSMPPIIWVVLALFWFSFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +    + +I   F S +          + ++   L+E+  ++ L   +K  +L +P 
Sbjct: 135 VSTIFTIIITSIPLTFASSM--------VGMMSVNEQLKEMFDAYDLGILKKIRHLYLPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
               ++ ++ +++  G   V+ +E++   D      G+GS IA A    D  +++  ++ 
Sbjct: 187 LTSYIISSLSVAVGMGVKIVIMAELLGASD------GVGSKIADARVMLDTPSVMAYVVL 240

Query: 248 MLGVIFLYDQLLFRPM 263
           ++ ++ L++ L+  P+
Sbjct: 241 VITLVMLFEYLIIEPL 256


>gi|77457033|ref|YP_346538.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas fluorescens Pf0-1]
 gi|77381036|gb|ABA72549.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 238

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 76/184 (41%), Gaps = 20/184 (10%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+   +VI ++ +L+H           + I  I      L  Y     + +L++M+ +L
Sbjct: 8   GLMGGAVVIALLALLVH----------WIGINTIEHYRDDLLFYLQAHLILVLASMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIFLSRPTMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P +V  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVPIIVGGVRV 169

Query: 199 SMSG 202
           +++ 
Sbjct: 170 ALAI 173



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 13/171 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V+  +A+ + W  I  I ++        +++     +  V+  ++ A ++ IP GI++
Sbjct: 13  AVVIALLALLVHWIGINTIEHYRD-----DLLFYLQAHLILVLASMLAALVVGIPAGIFL 67

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP +  + + F Q+       P      + +  +              +   +   I+
Sbjct: 68  -SRPTMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            N   G        KE A    +T  +    + LP   P  V G   A   
Sbjct: 123 RNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVPIIVGGVRVALAI 173


>gi|306824964|ref|ZP_07458307.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432791|gb|EFM35764.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 305

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSIFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|30264853|ref|NP_847230.1| ABC transporter, permease protein [Bacillus anthracis str. Ames]
 gi|47530337|ref|YP_021686.1| ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187668|ref|YP_030921.1| ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|52140717|ref|YP_086111.1| ABC transporter, permease [Bacillus cereus E33L]
 gi|65322152|ref|ZP_00395111.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165869671|ref|ZP_02214329.1| ABC transporter, permease protein [Bacillus anthracis str. A0488]
 gi|167633924|ref|ZP_02392247.1| ABC transporter, permease protein [Bacillus anthracis str. A0442]
 gi|167638015|ref|ZP_02396293.1| ABC transporter, permease protein [Bacillus anthracis str. A0193]
 gi|170685780|ref|ZP_02877003.1| ABC transporter, permease protein [Bacillus anthracis str. A0465]
 gi|170705564|ref|ZP_02896028.1| ABC transporter, permease protein [Bacillus anthracis str. A0389]
 gi|177651112|ref|ZP_02933943.1| ABC transporter, permease protein [Bacillus anthracis str. A0174]
 gi|190568281|ref|ZP_03021189.1| ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196033053|ref|ZP_03100466.1| ABC transporter, permease protein [Bacillus cereus W]
 gi|218906014|ref|YP_002453848.1| ABC transporter, permease protein [Bacillus cereus AH820]
 gi|227817579|ref|YP_002817588.1| ABC transporter, permease protein [Bacillus anthracis str. CDC 684]
 gi|229602788|ref|YP_002869058.1| ABC transporter, permease protein [Bacillus anthracis str. A0248]
 gi|254687591|ref|ZP_05151447.1| ABC transporter, permease protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254736895|ref|ZP_05194601.1| ABC transporter, permease protein [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741930|ref|ZP_05199617.1| ABC transporter, permease protein [Bacillus anthracis str. Kruger
           B]
 gi|254754472|ref|ZP_05206507.1| ABC transporter, permease protein [Bacillus anthracis str. Vollum]
 gi|254757305|ref|ZP_05209332.1| ABC transporter, permease protein [Bacillus anthracis str.
           Australia 94]
 gi|301056291|ref|YP_003794502.1| ABC transporter permease [Bacillus anthracis CI]
 gi|30259528|gb|AAP28716.1| ABC transporter, permease protein [Bacillus anthracis str. Ames]
 gi|47505485|gb|AAT34161.1| ABC transporter, permease protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181595|gb|AAT56971.1| ABC transporter, permease protein [Bacillus anthracis str. Sterne]
 gi|51974186|gb|AAU15736.1| ABC transporter, permease [Bacillus cereus E33L]
 gi|164714500|gb|EDR20019.1| ABC transporter, permease protein [Bacillus anthracis str. A0488]
 gi|167513832|gb|EDR89200.1| ABC transporter, permease protein [Bacillus anthracis str. A0193]
 gi|167530725|gb|EDR93427.1| ABC transporter, permease protein [Bacillus anthracis str. A0442]
 gi|170129689|gb|EDS98552.1| ABC transporter, permease protein [Bacillus anthracis str. A0389]
 gi|170670244|gb|EDT20984.1| ABC transporter, permease protein [Bacillus anthracis str. A0465]
 gi|172082938|gb|EDT68000.1| ABC transporter, permease protein [Bacillus anthracis str. A0174]
 gi|190560537|gb|EDV14514.1| ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195994482|gb|EDX58437.1| ABC transporter, permease protein [Bacillus cereus W]
 gi|218537254|gb|ACK89652.1| ABC transporter, permease protein [Bacillus cereus AH820]
 gi|227004666|gb|ACP14409.1| ABC transporter, permease protein [Bacillus anthracis str. CDC 684]
 gi|229267196|gb|ACQ48833.1| ABC transporter, permease protein [Bacillus anthracis str. A0248]
 gi|300378460|gb|ADK07364.1| ABC transporter, permease [Bacillus cereus biovar anthracis str.
           CI]
          Length = 268

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLWIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|296102564|ref|YP_003612710.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057023|gb|ADF61761.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 236

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  + + S+M  +LL       L ++   R +   ++ I ++  ++P L  L  
Sbjct: 38  LIYLGQQHLILVFSSMFFALLVGIPAGILLSRPAARGVAEYVMQIFNVGNTLPPLAVLAL 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 98  AMVVIGIG--------DTPAIIALFLASLLPIVRNTYAGLCSVPSSLLEAANGIGMTKWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 150 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 202

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 203 PTLILGAAATALFALILDTLL 223



 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 80/227 (35%), Gaps = 14/227 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V  + + +A  + G  +     + V  +I+LG   +  V   +  A ++ IP GI +
Sbjct: 9   LLFVGAIIVVLALLTWGIGLETIKARQV-DLIYLGQQHLILVFSSMFFALLVGIPAGILL 67

Query: 409 GF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  ++  +     +    P      L +  +            + +   +   I+ 
Sbjct: 68  SRPAARGVAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDT----PAIIALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AG  + P+   E A+   +T W+  R + LP  +P  ++G   A       + ++ +
Sbjct: 124 NTYAGLCSVPSSLLEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAFL 183

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                     +  G  I        FP ++LG      F L L+  L
Sbjct: 184 IG-------ASSYGELIFPGIYLNDFPTLILGAAATALFALILDTLL 223


>gi|329770300|ref|ZP_08261687.1| hypothetical protein HMPREF0433_01451 [Gemella sanguinis M325]
 gi|328836822|gb|EGF86471.1| hypothetical protein HMPREF0433_01451 [Gemella sanguinis M325]
          Length = 261

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 75/214 (35%), Gaps = 18/214 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLSAMVI 78
            A  ++I +I     G         I   + I          L  ++  T L  +  +++
Sbjct: 13  AAISMLILLIIWQGAGYLNLLPKYIIPTPIEIVQSFIKNYKQLIFHSKITLLEAIIGLLL 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++  +  A +          + P+L + Q+IP +      V++       K        
Sbjct: 73  GIIIAWTLALIMDSIPVFNKAIYPLLVLTQTIPTIAIAPILVLWLGYGLTPK-------- 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +  + +  S+     N   D+  + +    S  Q  W++ +P S+      + +
Sbjct: 125 IVLIVLTTTFPIVVSILDGFRNCDNDMITLLKLMNASKLQILWHVKIPTSLSYFYAGLRV 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S+S  +   V +E +          G+G Y+  A
Sbjct: 185 SVSYAFIAAVVAEWLGG------FEGLGVYMIKA 212



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 84/222 (37%), Gaps = 23/222 (10%)

Query: 349 FCVVCGVAIGIAWQSIGYI-------------VNHFTYQDVLYVIWLGCITMFRVVVLII 395
              +  + + I WQ  GY+             +     ++   +I+   IT+   ++ ++
Sbjct: 12  AAAISMLILLIIWQGAGYLNLLPKYIIPTPIEIVQSFIKNYKQLIFHSKITLLEAIIGLL 71

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +  II   + + +   P  +  I P   L    P     P++V  + Y          +L
Sbjct: 72  LGIIIAWTLALIMDSIPVFNKAIYPLLVLTQTIPTIAIAPILVLWLGYGLTPK----IVL 127

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++  T + I+ +++ G     ND   +    + +  +   ++ +P    Y+  G   +  
Sbjct: 128 IVLTTTFPIVVSILDGFRNCDNDMITLLKLMNASKLQILWHVKIPTSLSYFYAGLRVSVS 187

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            A+ A++V+E            GLG Y+ ++ +   +  +  
Sbjct: 188 YAFIAAVVAEWLGGFE------GLGVYMIKAKKLFEYDTMFA 223


>gi|307244068|ref|ZP_07526187.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492592|gb|EFM64626.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 211

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 78/195 (40%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + L         ++ R+L   ++ I +++Q+IP L  L+  +V    
Sbjct: 20  IRHFLISVYGVLFACLLAIPVGMYISRYRKLSGFVIGIANVIQTIPSLALLSILMVAMGL 79

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  +    L N+  DL +V++   ++  Q  + + +
Sbjct: 80  G--------TNTVVATVFLYSILPILKNTCTGLNNVSYDLIDVAKGMGMTRGQILFKVKL 131

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  +    T I   G+G  I+  I   +  AI++A 
Sbjct: 132 PLSLSVIIGGIR-------NALVIAVGVTTIGTFIGAGGLGDIISRGIVVTNGSAIIWAG 184

Query: 246 -LTMLGVIFLYDQLL 259
            +    +  ++D  L
Sbjct: 185 TIPTAIMAVVFDLAL 199



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 12/185 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               V  ++ A ++ IPVG++I     +S  +   A ++   P+     +++  +     
Sbjct: 23  FLISVYGVLFACLLAIPVGMYISRYRKLSGFVIGIANVIQTIPSLALLSILMVAMGLGTN 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   IL N   G +    D  +VA    +T  +    + LP      
Sbjct: 83  T----VVATVFLYSILPILKNTCTGLNNVSYDLIDVAKGMGMTRGQILFKVKLPLSLSVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCCF 565
           + G         NA +++   +     +   GLG  I+      +   ++  G +     
Sbjct: 139 IGGIR-------NALVIAVGVTTIGTFIGAGGLGDIISRGIVVTNGSAIIWAGTIPTAIM 191

Query: 566 VLALN 570
            +  +
Sbjct: 192 AVVFD 196


>gi|146320961|ref|YP_001200672.1| phosphate ABC transporter permease [Streptococcus suis 98HAH33]
 gi|145691767|gb|ABP92272.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis 98HAH33]
          Length = 303

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 18/221 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYASRTTLR 71
           +   L   L++ I+ ++L  + +  +    VD V IT        +  S    A      
Sbjct: 25  VITFLCLSLIVFIVAMILIFVAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISG 84

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
                ++S +     A  AA        +R   +L P+++++  IP + +    L   V 
Sbjct: 85  SFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVP 144

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E S +   + WQ  W
Sbjct: 145 FVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIW 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + +  + PG+   ++  M+  +   +A +M+V    VIP 
Sbjct: 204 RVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPT 244



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFP 429
               +   + +   +    ++  ++A+ I I   +++        +  +QP  +LL   P
Sbjct: 71  PSSKIFGALPMISGSFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIP 130

Query: 430 ANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           + V+         P V S      + +   +++  +MI  T   + F  +    A P  +
Sbjct: 131 SVVYGFIGLQVVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E + +   T W+    +IL    P   T  I     A+  ++  ++       + T+
Sbjct: 188 REASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 245


>gi|325965362|ref|YP_004243267.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471449|gb|ADX75133.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 266

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 93/271 (34%), Gaps = 27/271 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385
           P    +      V     + W  +V  VA+       G +           +I L  I  
Sbjct: 7   PPAVQEKQKAALVPRASLVRWAIIVAIVAVLEFTTRTGMVSQSLMVPPSEILIRLAEIVP 66

Query: 386 ----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                     T+  ++V   I  ++ +P+GI++   P     ++PF     A P  +F+P
Sbjct: 67  TDRFGQDVARTLTTILVSFTIGLVLGVPLGIFLWRVPAAGRILEPFIVTGYAMPTLLFYP 126

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++++ +          + ++    +   I    +   +A      ++A+S   +  +++ 
Sbjct: 127 VLLAMMGLNAG----PIIVIAASMSLIPIALTTMVALNAIKPILHKLANSVSASPRQYYL 182

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++ P   P    G       A   ++  E        L + G+G        + +  ++
Sbjct: 183 KVLFPAATPLIFPGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGFYYRELNTADM 236

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              + ++    + +N  L      +  + +R
Sbjct: 237 WAYIAVVIVLSVLVNSVL-----TWLEKRIR 262



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 21/254 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINIL-------LHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           +        L+ + +++ I+ +L       +        P +I+  +   +      Q  
Sbjct: 15  KAALVPRASLVRWAIIVAIVAVLEFTTRTGMVSQSLMVPPSEILIRLAEIVPTDRFGQDV 74

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +RT   +L +  I L+          +    G +L P +    ++P L F    ++  M 
Sbjct: 75  ARTLTTILVSFTIGLVLGVPLGIFLWRVPAAGRILEPFIVTGYAMPTLLFYP-VLLAMMG 133

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L  G +       I    +  +  +  +   +L  I   L +++ S   S  Q +  +  
Sbjct: 134 LNAGPI-------IVIAASMSLIPIALTTMVALNAIKPILHKLANSVSASPRQYYLKVLF 186

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   + +         VA E I      +   G+G       +E +   +   +
Sbjct: 187 PAATPLIFPGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGFYYRELNTADMWAYI 240

Query: 246 LTMLGVIFLYDQLL 259
             ++ +  L + +L
Sbjct: 241 AVVIVLSVLVNSVL 254


>gi|170288542|ref|YP_001738780.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
 gi|170176045|gb|ACB09097.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
          Length = 243

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 80/229 (34%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I W+ +       +           F              T+ + +   +I   + +
Sbjct: 9   LVLIAWYLLHFLFPSSLILPGPVETFEVFVKMLNRETFEALLSTLLKGLASTLIVIAVGL 68

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG ++G    +   ++P   ++ A P   +  +V+         P +  SL +I     
Sbjct: 69  PVGFFMGISDRVYEFLRPLVTVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSLIPVA-- 126

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +F  ++G  +      EV   + +      + + L  I+P+ ++    + G  W A +
Sbjct: 127 --IFTTVSGVRSVDRKLLEVMKVYRVPRRMILKEVYLGSIWPFVLSILEVSSGNVWKAVV 184

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + E           +GLG  I+ + +    P V    +      ++  R
Sbjct: 185 MGEYLCGD------SGLGVLISWARQYVDVPRVYALTIFTVVLGISFER 227



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 97/235 (41%), Gaps = 17/235 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +L  ++   +++ L         P +  ++    L+  +  +    T L+ L++ +I
Sbjct: 4   VFGILLVLIAWYLLHFLFPSSLILPGPVETFEVFVKMLNRETF-EALLSTLLKGLASTLI 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +            S R+   L P++ ++Q++P++ +L   +  +   + G V+ + L+ 
Sbjct: 63  VIAVGLPVGFFMGISDRVYEFLRPLVTVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSL 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I            F+    + ++ R L EV + +R+        + +    P ++  + +
Sbjct: 123 IPVAI--------FTTVSGVRSVDRKLLEVMKVYRVPRRMILKEVYLGSIWPFVLSILEV 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           S    W  VV      +G+ +    G+G  I+ A +  D+  +    LT+  V+ 
Sbjct: 175 SSGNVWKAVV------MGEYLCGDSGLGVLISWARQYVDVPRVYA--LTIFTVVL 221


>gi|114328576|ref|YP_745733.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316750|gb|ABI62810.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 235

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 10/228 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W          +   +   IV          ++    IT+ RV     +A ++  
Sbjct: 3   LLLAIWEGAAVWAHDPLLPSASTVIVAMVQQAMHGALLPTLAITLRRVAESFTLALVVGT 62

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G+ +G  P +++ +      L   PA V   L+                + +      
Sbjct: 63  AIGVALGRMPRLNAIMDSLLTALLNLPAVVLIVLIYIWFGLT----EWAAVMAVALNKLP 118

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                V  GA A      ++A SF ++     R+ +LP + PY    A +     W   +
Sbjct: 119 NTAVTVREGARALDPALLDMARSFRMSRLAILRHAVLPQLAPYIFAAARSGLSIIWKIVL 178

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E+        R+ G+G  +    +      +++  L     V AL 
Sbjct: 179 VVELLG------RSDGVGFQLQVYFQLFDVTGILVYTLAFILVVQALE 220



 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 96/249 (38%), Gaps = 16/249 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--HSLPQYASRTTLRMLSAMVISLLF 82
            VL++ I         +  +P     IV +       +L    + T  R+  +  ++L+ 
Sbjct: 1   MVLLLAIWEGAAVWAHDPLLPSASTVIVAMVQQAMHGALLPTLAITLRRVAESFTLALVV 60

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                    +  RL  ++  +L  + ++P +  +    ++F           E AA+ A+
Sbjct: 61  GTAIGVALGRMPRLNAIMDSLLTALLNLPAVVLIVLIYIWFGL--------TEWAAVMAV 112

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +++ N   ++ +    +   L +++RSFR+S      +  +P   P +       +S 
Sbjct: 113 ALNKLPNTAVTVREGARALDPALLDMARSFRMSRLAILRHAVLPQLAPYIFAAARSGLSI 172

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  V+  E++          G+G  + +  +  D+  IL   L  + V+   +  + + 
Sbjct: 173 IWKIVLVVELLG------RSDGVGFQLQVYFQLFDVTGILVYTLAFILVVQALEWGVLQV 226

Query: 263 MIVWSNKFR 271
           +    + +R
Sbjct: 227 LERRVSSWR 235


>gi|91787053|ref|YP_548005.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91696278|gb|ABE43107.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 207

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +           L+A+ I+   + V   +AA+  RL   ++ +  I+ +IP L FL
Sbjct: 7   NWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTIPTLAFL 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F +                 AI  +    +  +  S+   +  +P D+ + +R   +S 
Sbjct: 67  AFLIPLVGLGRTN--------AIITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSA 118

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P ++P +V  + +S        V +  +  G       G+G+ I   I   
Sbjct: 119 AQIMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAG-------GLGTLIFNGIASD 171

Query: 237 DLLAILYAMLTMLGVIFLYD 256
               I    LT   +    D
Sbjct: 172 HPAKIWAGALTACALAVSVD 191



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 14/198 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D++Y +W         + +    S++   +G+    R  +   +   + +L   P   
Sbjct: 8   WTDIVYALWEHIAISLTALTIAFALSLV---IGLVAARRERLYGAVMTVSGILYTIPTLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F   ++  V     N  + +    +      ++ +V  G    P D  + A    ++  +
Sbjct: 65  FLAFLIPLVGLGRTNAIITMVAFSLMI----LIRSVATGIREVPADVIDAARGMGMSAAQ 120

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I LP   P  V G   +     + ++V+   + G       GLG  I         
Sbjct: 121 IMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAG-------GLGTLIFNGIASDHP 173

Query: 553 PEVVLGVLIMCCFVLALN 570
            ++  G L  C   ++++
Sbjct: 174 AKIWAGALTACALAVSVD 191


>gi|91777145|ref|YP_552353.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91689805|gb|ABE33003.1| ABC glycine betaine/L-proline transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
          Length = 217

 Score = 73.4 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   L Q  ++    +  A+  ++        L      L   L+ I  ++ ++P +
Sbjct: 7   LSANWPELLQLTAQHVWLVGIAVGCAIFVGVPLGILINWHEWLAAPLLSIATVVLTLPSI 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +  F     G      + AI A+F   +  +  + Y +L N+   ++E      
Sbjct: 67  ALFGLMIPVFSRFGQGI---GAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIG 123

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G+ I  AI
Sbjct: 124 MTVWQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIIRAI 176

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
            +  ++ +L   + +  +  + D
Sbjct: 177 GQSSMMKLLVGAVLVSVLAIVAD 199



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 76/202 (37%), Gaps = 8/202 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            +   +   ++ L    ++ V + +  A  + +P+GI I +   +++ +   A ++   P
Sbjct: 5   DYLSANWPELLQLTAQHVWLVGIAVGCAIFVGVPLGILINWHEWLAAPLLSIATVVLTLP 64

Query: 430 ANVFFPLVVSCVSYYHLNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S +      +     +   +   I+ N            KE      +
Sbjct: 65  SIALFGLMIPVFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R + LP   P  + G  TA         ++ V   G       GLG  I  +  
Sbjct: 125 TVWQRLRLVDLPLAVPVILGGVRTAVVMNIGVMTIAAVIGAG-------GLGTLIIRAIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           + S  ++++G +++    +  +
Sbjct: 178 QSSMMKLLVGAVLVSVLAIVAD 199


>gi|196041516|ref|ZP_03108809.1| ABC transporter, permease protein [Bacillus cereus NVH0597-99]
 gi|196027764|gb|EDX66378.1| ABC transporter, permease protein [Bacillus cereus NVH0597-99]
          Length = 268

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    +  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WIHIWTTLLETGIGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLWIHIWTTLLETGIGFILGTVLGAIIATFLWWIPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|221067429|ref|ZP_03543534.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
 gi|220712452|gb|EED67820.1| binding-protein-dependent transport systems inner membrane
           component [Comamonas testosteroni KF-1]
          Length = 262

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 78/237 (32%), Gaps = 15/237 (6%)

Query: 22  LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+A + +  +    L         P  +   +   L       +   T   +L  ++I  
Sbjct: 16  LIAVIAIWELAARQLGLSTLVLPAPSAVALSLWSGLASGYFWPHLWATLQALLLGLLIGS 75

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               +     A+S  L  VL P + + Q +P L      V++F       V+   L   F
Sbjct: 76  AVGLLAGMALAESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFGMLPTVLITALICFF 135

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  +    L        ++ R    +  Q    L +P  +P ++  + +++
Sbjct: 136 --------PLMENTLMGLRQADAQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAV 187

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
                  V +E +          G+G+ +  A    D   +  A++ +  +  L  Q
Sbjct: 188 VLALVGAVVAEFMGASQ------GLGAVVIAAQGMMDTTLMFAALVLIAAMGLLLYQ 238



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 17/219 (7%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           +V      +A      + + + +  +         T+  +++ ++I S + +  G+ +  
Sbjct: 35  LVLPAPSAVALSLWSGLASGYFWPHLW-------ATLQALLLGLLIGSAVGLLAGMALAE 87

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   ++P+  +    P     PL V    +      L   L+      + ++ N + 
Sbjct: 88  SELLERVLKPYVVVSQVVPKLALAPLFVLWFGFG----MLPTVLITALICFFPLMENTLM 143

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         ++      T  +    + LP   P  + G   A   A   ++V+E     
Sbjct: 144 GLRQADAQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAVVLALVGAVVAEFMG-- 201

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                + GLGA +  +        +   ++++    L L
Sbjct: 202 ----ASQGLGAVVIAAQGMMDTTLMFAALVLIAAMGLLL 236


>gi|293365712|ref|ZP_06612421.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|306829765|ref|ZP_07462954.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|291316080|gb|EFE56524.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|304428116|gb|EFM31207.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 305

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|225859970|ref|YP_002741480.1| ABC transporter, permease protein [Streptococcus pneumoniae 70585]
 gi|225721884|gb|ACO17738.1| ABC transporter, permease protein [Streptococcus pneumoniae 70585]
          Length = 253

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 88/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 6   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 66  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P
Sbjct: 123 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 178 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|222149534|ref|YP_002550491.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221736516|gb|ACM37479.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 288

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 14/278 (5%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            S      L   +        ++R HF     Q  +N  V  +  I    +   V  G  
Sbjct: 1   MSGYLLFALIFWLVAWGVNEWLVRQHFAALPAQRAANIAVPLLFGITLLVIWECVVRGFD 60

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
             SI        +  +++ + +         +  V+   +    +   V + I   P + 
Sbjct: 61  IPSILLPAPSMIWTRLIHSLPILWADFQQTFLKSVLTGYVAGCGLGFIVAVLIDRSPFLK 120

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P    ++A P     P++V    +   +       +++  T + +L N + G SA 
Sbjct: 121 QGLLPIGNFVSALPVVGVAPIMVMWFGFDWPSK----VAVVVIMTFFPMLVNTVQGLSAA 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
            N  +++  ++  + W+    + LP  +P+           A   +IV+E      +   
Sbjct: 177 SNMERDLMRTYAASWWQTLIKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIV--- 233

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G+G  I+    + +   V   + +           +
Sbjct: 234 --GMGFRISTEVGRSNVDMVWAEIAVAALAGSVFYGLV 269



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 13/188 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+  V      F+ A L  +S  L   L+PI + + ++P++G     V++F   +P K 
Sbjct: 95  VLTGYVAGCGLGFIVAVLIDRSPFLKQGLLPIGNFVSALPVVGVAPIMVMWFGFDWPSK- 153

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +  +     + M  +  Q L        ++ R++  S WQ    L +P + P 
Sbjct: 154 -------VAVVVIMTFFPMLVNTVQGLSAASNMERDLMRTYAASWWQTLIKLRLPAAWPF 206

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  +   ++  +   +      
Sbjct: 207 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRSNVDMVWAEIAVAALA 261

Query: 252 IFLYDQLL 259
             ++  L+
Sbjct: 262 GSVFYGLV 269


>gi|194397949|ref|YP_002038795.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194357616|gb|ACF56064.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 249

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 6   RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L         ++ P++ ++Q+IP +      V++           
Sbjct: 65  LGLILGVLIACLMAVLMDSLTWFNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P   
Sbjct: 119 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFY 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 177 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 209



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +      +  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 77  MAVLMDSLTWFNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 132

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 133 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 193 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 220


>gi|323161797|gb|EFZ47677.1| inner membrane ABC transporter permease protein yehY domain protein
           [Escherichia coli E128010]
          Length = 279

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 71  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 130

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 131 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 190

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 191 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 243

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 244 AIDLVLLGVIPVIVLAVLIDALF 266



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 19  DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 78

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 79  --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 136

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 137 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 196

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 197 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 249

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 250 LGVIPVIVLAVLIDALF 266


>gi|159896884|ref|YP_001543131.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889923|gb|ABX03003.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
          Length = 212

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   + Q   +     L A++I+ L       L  +   L   ++ +L ++ +IP L  
Sbjct: 13  TERAEVWQLLGQHVTISLIALLIASLIALPLGVLVVRVGWLAGGVMAVLSVLYTIPSLAM 72

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +  F          ++   I  +       +  ++   L +I R + E +R   ++
Sbjct: 73  LIMLIAVFGL--------SKTTVIVTLVIYAQVILVRNIVVGLKSIDRSVLEAARGLGMN 124

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ +W + +P ++P ++  + ++          + MI VG       G+G  +   I  
Sbjct: 125 AWQIWWQVELPLALPIMLAGLRIAAMMCIAISSIAAMIGVG-------GLGQLLFQGITF 177

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                I    +++  +  +   LL
Sbjct: 178 DRADMIWAGTISIASLALVCYGLL 201



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 70/183 (38%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++IAS+I +P+G+ +     ++  +     +L   P+       +  ++ + L+   
Sbjct: 30  LIALLIASLIALPLGVLVVRVGWLAGGVMAVLSVLYTIPSLAML---IMLIAVFGLSKTT 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L+I+  Q  ++ N++ G  +      E A    +  W+ W  + LP   P  + G 
Sbjct: 87  VIVTLVIY-AQVILVRNIVVGLKSIDRSVLEAARGLGMNAWQIWWQVELPLALPIMLAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A       S ++ +   G       GLG  + +         +  G + +    L   
Sbjct: 146 RIAAMMCIAISSIAAMIGVG-------GLGQLLFQGITFDRADMIWAGTISIASLALVCY 198

Query: 571 RFL 573
             L
Sbjct: 199 GLL 201


>gi|49481360|ref|YP_038829.1| ABC transporter permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|217962275|ref|YP_002340845.1| ABC transporter, permease protein [Bacillus cereus AH187]
 gi|49332916|gb|AAT63562.1| ABC transporter, permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|217063384|gb|ACJ77634.1| ABC transporter, permease protein [Bacillus cereus AH187]
          Length = 268

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 88/234 (37%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +     +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILLFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  LVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLLVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|262037610|ref|ZP_06011061.1| putative ABC transporter, permease protein [Leptotrichia
           goodfellowii F0264]
 gi|261748355|gb|EEY35743.1| putative ABC transporter, permease protein [Leptotrichia
           goodfellowii F0264]
          Length = 257

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 83/237 (35%), Gaps = 14/237 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            F ++ F+LV+  I  +   + +  +P     I     D   L  +   T       + +
Sbjct: 18  PFIIIVFILVLWQILSMTGIVPKFMLPSPFDVIKAFFSDFGLLMHHTVITLTEAFLGLGL 77

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++  FV A +  +       + P+L I Q++P +      V++             +  
Sbjct: 78  GIILGFVTAVIMDRFEFAYKAIYPVLVITQTVPTVAIAPLLVLWLGYGI--------MPK 129

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  +  + +T  +     +  +D   + ++   + +Q F ++  P S+      + +
Sbjct: 130 ITLIVITSFFPITVGLLDGFKSADKDALNLLKTMGATPFQNFIHIKFPSSIGYFFAGLRI 189

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           S+S      V +E +          G+G Y+    K      +   +  +  +    
Sbjct: 190 SVSYSIIGAVVAEWLGG------FDGLGVYMTRVRKSYSFDKMFAVIFFVSAISLFL 240



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +   + + W  +     +        + V    + D   ++    IT+    + + +  I
Sbjct: 21  IIVFILVLWQILSMTGIVPKFMLPSPFDVIKAFFSDFGLLMHHTVITLTEAFLGLGLGII 80

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +     + +         I P   +    P     PL+V  + Y      +    L++  
Sbjct: 81  LGFVTAVIMDRFEFAYKAIYPVLVITQTVPTVAIAPLLVLWLGYG----IMPKITLIVIT 136

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + + I   ++ G  +   D   +  +   T ++ + +I  P    Y+  G   +   +  
Sbjct: 137 SFFPITVGLLDGFKSADKDALNLLKTMGATPFQNFIHIKFPSSIGYFFAGLRISVSYSII 196

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++V+E            GLG Y+    +  SF ++   +  +    L L
Sbjct: 197 GAVVAEWLGGFD------GLGVYMTRVRKSYSFDKMFAVIFFVSAISLFL 240


>gi|206562415|ref|YP_002233178.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198038455|emb|CAR54413.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 272

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 19/267 (7%)

Query: 6   ILPPFISRRIFPNIFDL-LAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQ 63
            LP     R +   +   +AF  +  + +       +  VP   +   +   LD   L  
Sbjct: 16  RLPSVARLRDYALWWITPVAFAALWWLASAQRWFPPQLVVPPGRLAATLRTLLDTGELRD 75

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             S T  R+     I       +  L A+SR     L P  D+++            +  
Sbjct: 76  NLSITLHRLALGFAIGATGGAAFGVLLARSRLFSDYLRPTFDLLRQ--------LPTLTL 127

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + L    +   E   +  +  +  + +  + Y  + + PRDL E++R + L  +     +
Sbjct: 128 IPLLILLIGVDEQLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMARHYGLGRFALLRDV 187

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P L+  + ++++  W  +VA E++          GIG  + LA +   L  +L 
Sbjct: 188 LLPAALPPLLTGVRIALARAWLALVAVELLSADS------GIGQMMELARQMLRLDVVLV 241

Query: 244 AMLTMLGVIFLYDQ---LLFRPMIVWS 267
            +  +  + F  D+   L+ R  + W 
Sbjct: 242 DVAVIGLIGFALDRSIALVQRYALRWQ 268



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 90/263 (34%), Gaps = 18/263 (6%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF--WFCVVCGVAIGIAWQSIGYIV 368
           N ++   R   V R      +          + L     WF     V  G    ++  ++
Sbjct: 9   NGLRAAVRLPSVARLRDYALWWITPVAFAALWWLASAQRWFPPQLVVPPGRLAATLRTLL 68

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +    +D L       IT+ R+ +   I +      G+ +      S  ++P   LL   
Sbjct: 69  DTGELRDNLS------ITLHRLALGFAIGATGGAAFGVLLARSRLFSDYLRPTFDLLRQL 122

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P       ++  +            +++     + +      G    P D  E+A  + +
Sbjct: 123 PTLT----LIPLLILLIGVDEQLKLVVVGKAVFFPVALAAYTGVHDAPRDLVEMARHYGL 178

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             +   R ++LP   P  +TG   A   AW A +  E+ S        +G+G  +  + +
Sbjct: 179 GRFALLRDVLLPAALPPLLTGVRIALARAWLALVAVELLS------ADSGIGQMMELARQ 232

Query: 549 KGSFPEVVLGVLIMCCFVLALNR 571
                 V++ V ++     AL+R
Sbjct: 233 MLRLDVVLVDVAVIGLIGFALDR 255


>gi|15642976|ref|NP_228018.1| ABC transporter permease [Thermotoga maritima MSB8]
 gi|4980700|gb|AAD35295.1|AE001705_6 ABC transporter, permease protein, cysTW family [Thermotoga
           maritima MSB8]
          Length = 243

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 80/229 (34%), Gaps = 10/229 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I W+ +       +           F              T+ + +V   I   + +
Sbjct: 9   LVLIAWYLLHFLFPSSLILPGPVETFKVFIKMLNRETFEALLSTLLKGLVSTFIVIAVGL 68

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG ++G    +   ++P   ++ A P   +  +V+         P +  SL +I     
Sbjct: 69  PVGFFMGISDRVYEFLRPLVTVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSLIPVA-- 126

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             +F  ++G  +      EV   + +      + + L  I+P+ ++    + G  W A +
Sbjct: 127 --IFTTVSGVRSVDRKLLEVMKVYRVPRRMILKEVYLGSIWPFVLSILEVSSGNVWKAVV 184

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           + E           +GLG  I+ + +    P V    +      ++  R
Sbjct: 185 MGEYLCGD------SGLGVLISWARQYVDVPRVYALTIFTVVLGISFER 227



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 94/235 (40%), Gaps = 17/235 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +L  ++   +++ L         P +   +    L+  +  +    T L+ L +  I
Sbjct: 4   VFGILLVLIAWYLLHFLFPSSLILPGPVETFKVFIKMLNRETF-EALLSTLLKGLVSTFI 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +            S R+   L P++ ++Q++P++ +L   +  +   + G V+ + L+ 
Sbjct: 63  VIAVGLPVGFFMGISDRVYEFLRPLVTVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSL 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I            F+    + ++ R L EV + +R+        + +    P ++  + +
Sbjct: 123 IPVAI--------FTTVSGVRSVDRKLLEVMKVYRVPRRMILKEVYLGSIWPFVLSILEV 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           S    W  VV      +G+ +    G+G  I+ A +  D+  +    LT+  V+ 
Sbjct: 175 SSGNVWKAVV------MGEYLCGDSGLGVLISWARQYVDVPRVYA--LTIFTVVL 221


>gi|47565214|ref|ZP_00236257.1| ABC transporter, permease protein, putative [Bacillus cereus G9241]
 gi|206978340|ref|ZP_03239215.1| ABC transporter, permease protein [Bacillus cereus H3081.97]
 gi|222098256|ref|YP_002532313.1| ABC transporter , permease [Bacillus cereus Q1]
 gi|47558000|gb|EAL16325.1| ABC transporter, permease protein, putative [Bacillus cereus G9241]
 gi|206743471|gb|EDZ54903.1| ABC transporter, permease protein [Bacillus cereus H3081.97]
 gi|221242314|gb|ACM15024.1| ABC transporter, permease [Bacillus cereus Q1]
          Length = 268

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|308175119|ref|YP_003921824.1| Glycine betaine/carnitine/choline transport system permease opuCD
           [Bacillus amyloliquefaciens DSM 7]
 gi|307607983|emb|CBI44354.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCD [Bacillus amyloliquefaciens DSM 7]
          Length = 225

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 76/205 (37%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   +     R  L     +V + +F      + A+ RRL   +  + +++Q++P L 
Sbjct: 12  SQNGSYVLYECWRHFLMSAYGVVFAAVFAIPAGIVTARHRRLSGWVFAVANVIQTVPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I A+F   +  +  + +  + NI     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKYQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ +      ++ +   LL
Sbjct: 177 ATNGTAIILSGAIPTALMAVAADLL 201



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A++  IP GI       +S  +   A ++   PA     +++  +         
Sbjct: 30  AYGVVFAAVFAIPAGIVTARHRRLSGWVFAVANVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +   +   IL N   G     + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLAL 569
            TA   A   + +      G       GLG  I   +   +   ++L G +      +A 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILSGAIPTALMAVAA 198

Query: 570 NRFL 573
           +  +
Sbjct: 199 DLLM 202


>gi|306828649|ref|ZP_07461842.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
 gi|304429155|gb|EFM32242.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
          Length = 252

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++F  L  + +  +  I    + +  +P  +  +     D   L  ++  T    L
Sbjct: 9   RRHISLFGFLGVLSIWQLAGIFKL-LPKFILPTPLEILQSFARDREFLWHHSWATLRVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLVLGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 61  ATLRVALLGLVLGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 121 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 177 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|299134561|ref|ZP_07027753.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298590371|gb|EFI50574.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 269

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
             +     + +   IT+   V+   I +++ +  G+W    P  S+   P+ + + A P 
Sbjct: 64  VDWVVSGDIFYHLGITLTETVLGFFIGAVLALICGLWFALSPTASALSDPYIKAMNAMPR 123

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            +  P+          +       L+ F       FNV  G           A     T 
Sbjct: 124 VILAPIFALWFGLGIWSKVALGVTLVFFVVF----FNVYQGIKEVSPVVLANARMLGATR 179

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +  R + LP    +  +   T+ G A+  ++V E          + G+G  I ++    
Sbjct: 180 KQLLRTVYLPSATSWVFSSLHTSVGMAFVGAVVGEYLG------SSAGVGYLILQAEGVF 233

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
               V  G+ I+    L L+  +
Sbjct: 234 DVNTVFAGIAILTISALILDAVV 256



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +   +    +  +   T    +    I  +   +     A S     +  P +
Sbjct: 56  PIVVFSTMVDWVVSGDIFYHLGITLTETVLGFFIGAVLALICGLWFALSPTASALSDPYI 115

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             M ++P +       ++F             + +    T   + + F++YQ +  +   
Sbjct: 116 KAMNAMPRVILAPIFALWFGLGI--------WSKVALGVTLVFFVVFFNVYQGIKEVSPV 167

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +   +R    +  Q    + +P +   +  ++  S+   +   V  E +          G
Sbjct: 168 VLANARMLGATRKQLLRTVYLPSATSWVFSSLHTSVGMAFVGAVVGEYLGSSA------G 221

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           +G  I  A    D+  +   +  +     + D     +   ++ W
Sbjct: 222 VGYLILQAEGVFDVNTVFAGIAILTISALILDAVVTAIENRLLKW 266


>gi|312967421|ref|ZP_07781636.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 2362-75]
 gi|312287618|gb|EFR15523.1| inner membrane ABC transporter permease protein yehY [Escherichia
           coli 2362-75]
          Length = 235

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 27  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLA 86

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P   +          A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 87  ALVTAFPWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 146

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 147 VQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 199

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 200 AIDLVLLGVIPVIVLAVLTDALF 222



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++    
Sbjct: 31  LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVT 90

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+ G +  P D  E A +  ++G + +
Sbjct: 91  AFPWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRF 150

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ LP   P ++             ++++ +   G       G GA + +     +   
Sbjct: 151 LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDL 203

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    +  +   
Sbjct: 204 VLLGVIPVIVLAVLTDALF 222


>gi|116668598|ref|YP_829531.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116608707|gb|ABK01431.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 273

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 77/212 (36%), Gaps = 14/212 (6%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +  +     +  ++ Q   +T +         ++   V A +    R +   L+P+  ++
Sbjct: 57  LFSVPAAEANRQAILQNLGQTMVDSFLGFAAGMVGAVVIAGVFVLFRGVENALMPVAMLL 116

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +S+P++      ++ F    P       +  +F    + V+         L +    + E
Sbjct: 117 RSVPLVALAPIIILIFGRQEPAVAAIGGIVVLFPALVTIVF--------GLRSASPAMIE 168

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V   +  S W     + +P S+P     + +S+ G     + +E +  G       GIG 
Sbjct: 169 VIDVYGGSRWTALLKVALPSSLPAFFTAVKVSIPGAITGALLAEWLATGK------GIGY 222

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            I  A+       +  +++ +  V  +   ++
Sbjct: 223 AIISAVSRARNNEVWASVVVITLVSIILYTVV 254



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           TM    +      +  + +         + + + P A LL + P     P+++       
Sbjct: 77  TMVDSFLGFAAGMVGAVVIAGVFVLFRGVENALMPVAMLLRSVPLVALAPIIILIFGRQE 136

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                   ++++F     I+F    G  +      EV   +  + W     + LP   P 
Sbjct: 137 PAVAAIGGIVVLFPALVTIVF----GLRSASPAMIEVIDVYGGSRWTALLKVALPSSLPA 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + T    +  GA   ++++E  + G       G+G  I  +  +    EV   V+++   
Sbjct: 193 FFTAVKVSIPGAITGALLAEWLATGK------GIGYAIISAVSRARNNEVWASVVVITLV 246

Query: 566 VLAL 569
            + L
Sbjct: 247 SIIL 250


>gi|308067211|ref|YP_003868816.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Paenibacillus polymyxa E681]
 gi|305856490|gb|ADM68278.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Paenibacillus polymyxa E681]
          Length = 258

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 16/262 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           + ++P    +L F+         LH ++   +P   + +         L  +   T    
Sbjct: 12  KSVWPPFVAVLFFLAAWQGAVSYLH-VESWLLPAPSLIVQEGLAQTALLGAHTWATIRLT 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+   I      + A +      L   L P+L + Q+IPI+      +V+F      K++
Sbjct: 71  LAGFAIGTATGLLIAIILHTIPFLKSALYPLLILSQNIPIIALGPLLMVWFGFGVLPKLM 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L   F +  + +          L    R +    R    S    F  L +P S+P +
Sbjct: 131 VITLVCFFPVAVAAM--------DGLTRTDRTMMNYMRMSGASRTAIFMKLELPHSLPQV 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      + +E I   +      GIG Y+ L         I  A+  ++ + 
Sbjct: 183 FSGVKIAATYSVMGAIIAEWIGASE------GIGYYMLLQKSAYRTDLIFAAIGIIVALS 236

Query: 253 FLYDQLLFRPMIVWSNKFRLER 274
            L   ++   +  W  +++ +R
Sbjct: 237 LLMFVVIL-LLEKWLVRWKPDR 257



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
               +    ++  +F+     G    +  +S          Q+ L    L     +  + 
Sbjct: 9   SWWKSVWPPFVAVLFFLAAWQGAVSYLHVESWLLPAPSLIVQEGLAQTALLGAHTWATIR 68

Query: 393 LIIIASIIWIPVGIWIG----FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           L +    I    G+ I       P + S + P   L    P     PL++    +     
Sbjct: 69  LTLAGFAIGTATGLLIAIILHTIPFLKSALYPLLILSQNIPIIALGPLLMVWFGFG---- 124

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +++     + +    + G +               +    +  + LP   P   +
Sbjct: 125 VLPKLMVITLVCFFPVAVAAMDGLTRTDRTMMNYMRMSGASRTAIFMKLELPHSLPQVFS 184

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   +   +I++E          + G+G Y+           +   + I+    L 
Sbjct: 185 GVKIAATYSVMGAIIAEWIG------ASEGIGYYMLLQKSAYRTDLIFAAIGIIVALSLL 238

Query: 569 L 569
           +
Sbjct: 239 M 239


>gi|297528725|ref|YP_003670000.1| binding-protein-dependent transporters inner membrane component
           [Geobacillus sp. C56-T3]
 gi|297251977|gb|ADI25423.1| binding-protein-dependent transport systems inner membrane
           component [Geobacillus sp. C56-T3]
          Length = 209

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 15/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L    AM I+++          + R+L   ++ +  I+Q+IP L  L F +  F     
Sbjct: 22  VLLSAIAMGIAIVIAVPLGVALTRHRKLAEPIIGVAAIIQTIPSLALLGFMLPIFGIG-- 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                 +L AI A+    +  +  + Y  +  +   L +  R   ++  Q  W + +P S
Sbjct: 80  ------KLPAIIALMLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLS 133

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +  +        V +  +    T I   G+G  I   ++  D   IL   +  
Sbjct: 134 LPVIMAGVRTA-------TVLTIGVAALATFIGAGGLGDLIDRGLRIADKNLILAGAIPA 186

Query: 249 LGVIFLYDQLL 259
             +   +D LL
Sbjct: 187 AILAIAFDWLL 197



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 11/185 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+G+ +     ++  I   A ++   P+      ++           L
Sbjct: 26  AIAMGIAIVIAVPLGVALTRHRKLAEPIIGVAAIIQTIPSLALLGFMLPIFGIG----KL 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + ++      IL N   G         +      +T  +    + LP   P  + G 
Sbjct: 82  PAIIALMLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLPVIMAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++     G       GLG  I           ++ G +      +A +
Sbjct: 142 RTATVLTIGVAALATFIGAG-------GLGDLIDRGLRIADKNLILAGAIPAAILAIAFD 194

Query: 571 RFLWH 575
             L  
Sbjct: 195 WLLRK 199


>gi|332361839|gb|EGJ39642.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK355]
          Length = 309

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 74  NPSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 133

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 134 SVVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 192

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 193 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 252

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 253 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 300



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 80  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 139

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 140 IGLQIVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 196

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 197 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 256

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 257 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 289


>gi|332716076|ref|YP_004443542.1| ABC transporter membrane spanning protein [Agrobacterium sp. H13-3]
 gi|325062761|gb|ADY66451.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 261

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +L +  + I L       +P        +      L   A  T+  M   +   +  
Sbjct: 10  VVLILFVWQLGIWLFAPPRYILPSPADVAAALLRQPAFLFGQAMVTSGEMAVGLAAGIAA 69

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A   A   R G ++ P++ ++Q+ P+       V++F      KV+   +   F +
Sbjct: 70  GILVAFTIAAVPRFGRLVWPMVLVLQAFPVFVLAPILVLWFGFGMASKVVMTAIIIFFPV 129

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            ++            L    R + + +     S WQ    L VP ++P L+  + ++   
Sbjct: 130 ASA--------FTDGLNRTDRTILDAASLTEASHWQILTRLRVPLALPSLISGLRVAAPL 181

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                V  E +          G+G  +  +        +  AM  +  +  L   ++ R
Sbjct: 182 APLGAVIGEWVGASA------GLGFVMIQSNARMQTDTMFAAMTILALMAVLLRLVVDR 234



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 77/238 (32%), Gaps = 10/238 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++     +   ++   W   +   A           V     +   ++     +T   + 
Sbjct: 1   MRASHALKGVVLILFVWQLGIWLFAPPRYILPSPADVAAALLRQPAFLFGQAMVTSGEMA 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V +       I V   I   P     + P   +L AFP  V  P++V    +   +  + 
Sbjct: 61  VGLAAGIAAGILVAFTIAAVPRFGRLVWPMVLVLQAFPVFVLAPILVLWFGFGMASKVVM 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            ++++ F     +      G +       + AS    + W+    + +P   P  ++G  
Sbjct: 121 TAIIIFF----PVASAFTDGLNRTDRTILDAASLTEASHWQILTRLRVPLALPSLISGLR 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            A   A   +++ E          + GLG  + +S  +     +   + I+    + L
Sbjct: 177 VAAPLAPLGAVIGEWVG------ASAGLGFVMIQSNARMQTDTMFAAMTILALMAVLL 228


>gi|159896881|ref|YP_001543128.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889920|gb|ABX03000.1| binding-protein-dependent transport systems inner membrane
           component [Herpetosiphon aurantiacus ATCC 23779]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 86/203 (42%), Gaps = 13/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L    +R    + SAM I+LL    +   +++SR +  + +   + ++ IP L  L
Sbjct: 16  NLARLSAALNRHGQLVASAMAIALLLGLPFGWWSSRSRLISAIAINTTNGLRVIPSLAIL 75

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F+ +       +  +AI A+    +  +  +   +   +   + E +++  +  
Sbjct: 76  ------FLFVAIPGFGLSIRSAIIALTILALPPILINTNTAFRTLNPAVREAAKAMGMPA 129

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W + W + +P + P ++  + +++      V+AS  +      I   G+GS+I L     
Sbjct: 130 WLQLWRVELPLAAPVILSGIRIAL----VEVIASATLAA---FIGAGGLGSFITLGFSMS 182

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L   + +  +  L + ++
Sbjct: 183 RVDILLVGAIPVALLAILAEIVM 205



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 9/179 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   + IA ++ +P G W      IS+        L   P+      +   +  + L+  
Sbjct: 31  VASAMAIALLLGLPFGWWSSRSRLISAIAINTTNGLRVIPSLAIL-FLFVAIPGFGLSIR 89

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  L I      IL N            +E A +  +  W     + LP   P  ++G
Sbjct: 90  SAIIALTIL-ALPPILINTNTAFRTLNPAVREAAKAMGMPAWLQLWRVELPLAAPVILSG 148

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
              A      ++ ++     G       GLG++I           +++G + +    + 
Sbjct: 149 IRIALVEVIASATLAAFIGAG-------GLGSFITLGFSMSRVDILLVGAIPVALLAIL 200


>gi|115265544|dbj|BAF32806.1| Permease of glycine betaine/carnitine/choline ABC transporter
           [Pseudomonas syringae pv. actinidiae]
 gi|330873457|gb|EGH07606.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330965278|gb|EGH65538.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 79/204 (38%), Gaps = 10/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D   +    ++    +  A+ ++++       L  +   L   L     ++ ++P +  
Sbjct: 10  IDWAQVLHLTTQHITLVGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLTVPSIAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   ++
Sbjct: 70  FGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I  
Sbjct: 127 FGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISR 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D+  ++   + +  +  + D LL
Sbjct: 180 SDMSMLIVGAVLVSILAIIADLLL 203



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 8/200 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   V+ L    +  V + + +A ++ +P+G+ +   P ++  +Q  A +L   P+   F
Sbjct: 11  DWAQVLHLTTQHITLVGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLTVPSIALF 70

Query: 435 PLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++   S +        ++  +   +   I+ N     +      +E A    +T  + 
Sbjct: 71  GLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMTFGQR 130

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  TA         ++     G       GLG  I  S  +    
Sbjct: 131 LRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISRSDMS 183

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G +++    +  +  L
Sbjct: 184 MLIVGAVLVSILAIIADLLL 203


>gi|327459831|gb|EGF06171.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1057]
          Length = 305

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMVLGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 248

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 296



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMVLGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQIVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 285


>gi|283853438|ref|ZP_06370682.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
 gi|283571158|gb|EFC19174.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. FW1012B]
          Length = 300

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +   G  T+ RV+       +  +  G   G  P +    +   + L   P+    P+
Sbjct: 98  GELARQGLATLLRVLGGFAAGGVFGVAFGFACGVWPGLGRASRLTVEFLRPMPSVALIPI 157

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             +  F   W      +AG+ A   + +  A  + +T      Y
Sbjct: 158 GILFLGLGFG----LCVAVAGFACAWPAYVAALAGSGAAGAELRATARVYGLTRGETIVY 213

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ P   P  + G   A   A   ++ +E+A+         GLG++I ES+       + 
Sbjct: 214 VLAPAAAPQVMAGLRVALAVAVAVTVTTEMAASPD------GLGSFILESSLSRRPEAMY 267

Query: 557 LGVLIMCCFVLALNRFL---WHPLYLY 580
            G++ +      LN         L  +
Sbjct: 268 AGIVAVGLLGFLLNAAFVAARRRLLRW 294



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T LR+L       +F   +         LG      ++ ++ +P +  +  
Sbjct: 98  GELARQGLATLLRVLGGFAAGGVFGVAFGFACGVWPGLGRASRLTVEFLRPMPSVALIPI 157

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++    +   V  A  A          W    +          +L   +R + L+  +
Sbjct: 158 GILFLGLGFGLCVAVAGFAC--------AWPAYVAALAGSGAAGAELRATARVYGLTRGE 209

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+  P + P ++  + ++++      V +EM    D      G+GS+I  +   +  
Sbjct: 210 TIVYVLAPAAAPQVMAGLRVALAVAVAVTVTTEMAASPD------GLGSFILESSLSRRP 263

Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVW 266
            A+   ++ +  + FL +       R ++ W
Sbjct: 264 EAMYAGIVAVGLLGFLLNAAFVAARRRLLRW 294


>gi|326942573|gb|AEA18469.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 275

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 90/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +N  +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKNERRRAWIARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLTKWIDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|289423475|ref|ZP_06425277.1| ABC transporter, permease protein [Peptostreptococcus anaerobius
           653-L]
 gi|289156109|gb|EFD04772.1| ABC transporter, permease protein [Peptostreptococcus anaerobius
           653-L]
          Length = 262

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 103/242 (42%), Gaps = 14/242 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+ ++LV  I+++++        P   V  + +     S  Q    + +R+   + +  +
Sbjct: 26  LIFWLLVWQILSMVVDQEILLVSPLLAVKTMFVMAADISFWQSIFNSFVRVFLGLFLGFV 85

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A ++ +SR + ++L P++  +Q++P++ F+   +++         I     ++  
Sbjct: 86  LGTGLAIMSYRSRTIKILLEPLILTIQTVPVVSFIIIFLIW---------IKPSNLSVLV 136

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F         ++Y  L +I R++ +++R +++S ++K  Y+        +     + + 
Sbjct: 137 SFLMVSPIFYRNVYGGLSSIGREILDLARVYKVSTYKKIRYIYFSRIETSIRAACEVGLG 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             W   +A+E+I +         IG  +  +    +   +    +T++ +  L+  +  +
Sbjct: 197 FCWKSGIAAEVIGMPTNT-----IGEKLYESKIYLNTSQLFAWTITIILLSLLFKWVFMK 251

Query: 262 PM 263
            +
Sbjct: 252 VL 253



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 13/245 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI- 385
             +   +            + W  +   V   I   S    V            W     
Sbjct: 12  LDKRHDKFIKYTLSLIFWLLVWQILSMVVDQEILLVSPLLAVKTMFVMAADISFWQSIFN 71

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  RV + + +  ++   + I       I   ++P    +   P   F  + +  +    
Sbjct: 72  SFVRVFLGLFLGFVLGTGLAIMSYRSRTIKILLEPLILTIQTVPVVSFIIIFLIWI--KP 129

Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            N ++ +S LM+      I + NV  G S+   +  ++A  + ++ ++  RYI    I  
Sbjct: 130 SNLSVLVSFLMVS----PIFYRNVYGGLSSIGREILDLARVYKVSTYKKIRYIYFSRIET 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                     G  W + I +EV            +G  + ES    +  ++    + +  
Sbjct: 186 SIRAACEVGLGFCWKSGIAAEVIGMPTNT-----IGEKLYESKIYLNTSQLFAWTITIIL 240

Query: 565 FVLAL 569
             L  
Sbjct: 241 LSLLF 245


>gi|56413542|ref|YP_150617.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362467|ref|YP_002142104.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127799|gb|AAV77305.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093944|emb|CAR59434.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 236

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDTLL 224



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILDTLL 224


>gi|291562438|emb|CBL41254.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 284

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +      + +   +T+   ++   + + I I   + +     ++  ++P+  +L + P 
Sbjct: 83  LSMAADRTIFYHTGVTVLETLLSFFLVTWIGIFGAVALWSSRRLAKILEPYLVILNSLPK 142

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +             + +FG+    L+N   G  +   D   +  +     
Sbjct: 143 SALAPLLIVWLGNNMKTIITAAVSVAVFGSI-LTLYN---GFLSMDPDQIRLIYTLGGKQ 198

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 ++LPG  P  ++      G      I+ E  S         GLG  I   ++  
Sbjct: 199 KDVLTKVLLPGSVPLIISNMKVNIGLCLVGVIIGEFLS------AQAGLGFLIIYGSQVF 252

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               V++ ++I+C     L
Sbjct: 253 KLDLVIMSIVILCILSAIL 271



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 87/253 (34%), Gaps = 20/253 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQET------TVPRDIVDIVPITLDVHSLPQYAS 66
           RRI   IF      LV+ + +  +            + P  ++          ++  +  
Sbjct: 37  RRIRRQIFICRILFLVLFLFSWEISARIGILNDFIFSSPSRVLSCFLSMAADRTIFYHTG 96

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T L  L +  +        A     SRRL  +L P L I+ S+P        +V+  N 
Sbjct: 97  VTVLETLLSFFLVTWIGIFGAVALWSSRRLAKILEPYLVILNSLPKSALAPLLIVWLGNN 156

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +  A   A+F            ++Y    ++  D   +  +           + +P
Sbjct: 157 MKTIITAAVSVAVFGSI--------LTLYNGFLSMDPDQIRLIYTLGGKQKDVLTKVLLP 208

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+P ++ NM +++      V+  E +          G+G  I    +   L  ++ +++
Sbjct: 209 GSVPLIISNMKVNIGLCLVGVIIGEFLS------AQAGLGFLIIYGSQVFKLDLVIMSIV 262

Query: 247 TMLGVIFLYDQLL 259
            +  +  +  Q +
Sbjct: 263 ILCILSAILYQAV 275


>gi|238788795|ref|ZP_04632586.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           frederiksenii ATCC 33641]
 gi|238723100|gb|EEQ14749.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           frederiksenii ATCC 33641]
          Length = 334

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+ ++ +++          +S R    +   L+I+Q+IP +      +     L     
Sbjct: 134 LLTTLIPAVILGISLGLFCFRSHRFQGAIFSTLNIIQTIPSIALFGLLIAPLAGLATAIP 193

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ +
Sbjct: 194 WLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRSQLFFRV 253

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP ++  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 254 QIPIAMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 306

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 307 GVIPVIVMAVVVDSLF 322



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  ++  +I A I+ I +G++          I     ++   P+   F L+++ ++    
Sbjct: 131 LQILLTTLIPAVILGISLGLFCFRSHRFQGAIFSTLNIIQTIPSIALFGLLIAPLAGLAT 190

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 191 AIPWLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLEAVPDSVVESARGMGMTRSQLF 250

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  ++G           ++V+ +   G       GLGA + +     +   
Sbjct: 251 FRVQIPIAMPLILSGIRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 303

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 304 VLLGVIPVIVMAVVVDSLF 322


>gi|329960796|ref|ZP_08299102.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           fluxus YIT 12057]
 gi|328532397|gb|EGF59198.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           fluxus YIT 12057]
          Length = 394

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    A   ++  + ++  ++ P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLAVAIYMSEVANPKIRNLMKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FIQKAFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGPHYEALFLLGVVLFFISLL 381



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+IA    + V I++     P I + ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSLFAILIALPFGLAVAIYMSEVANPKIRNLMKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFIQKAFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|308182977|ref|YP_003927104.1| osmoprotection protein (proWX) [Helicobacter pylori PeCan4]
 gi|308065162|gb|ADO07054.1| osmoprotection protein (proWX) [Helicobacter pylori PeCan4]
          Length = 553

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L++   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLSIALF 228

Query: 252 IFLYDQLL 259
             L DQL+
Sbjct: 229 SVLADQLV 236



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAIVLKISVVKHLMQEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G L +  F +  ++ +
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLSIALFSVLADQLV 236


>gi|222149533|ref|YP_002550490.1| ABC transporter [Agrobacterium vitis S4]
 gi|221736515|gb|ACM37478.1| ABC transporter [Agrobacterium vitis S4]
          Length = 288

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +A  T    L    +  +   + A     +R +   L+P +   Q+IPI+  
Sbjct: 79  TSKRSLVYHAWITLSATLMGFGMGTVLGILLAIAIVHNRAVDKSLMPWVIASQTIPIIAV 138

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   L + +  F    + +   M + L +    L ++ R++  S
Sbjct: 139 APMIIVVLNAIGISGLMPKALISTYLSF----FPVVVGMVKGLRSPDAILIDLMRTYYAS 194

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P +MP L  ++ ++++      +  E+         + G+G+ +      
Sbjct: 195 NTQTFWKLRMPAAMPYLFTSLKVAIAISLVGAIVGEL-----PTGAVAGLGARLLSGSYY 249

Query: 236 QDLLAIL 242
              + I 
Sbjct: 250 GQTVQIW 256



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   + +++ I + I I     +   + P+       P     P++
Sbjct: 83  SLVYHAWITLSATLMGFGMGTVLGILLAIAIVHNRAVDKSLMPWVIASQTIPIIAVAPMI 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  +  +L+  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 143 IVVLNAIGISGLMPKALISTYLSFFPVVVGMVKGLRSPDAILIDLMRTYYASNTQTFWKL 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            +P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 203 RMPAAMPYLFTSLKVAIAISLVGAIVGELPTGA-----VAGLGARLLSGSYYGQTVQIW 256


>gi|71736588|ref|YP_276395.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71557141|gb|AAZ36352.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320330141|gb|EFW86127.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330882337|gb|EGH16486.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 79/204 (38%), Gaps = 10/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D   +    ++    +  A+ +++L       L  +   L   L     ++ ++P +  
Sbjct: 10  IDWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   ++
Sbjct: 70  FGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I  
Sbjct: 127 FGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISR 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D+  ++   + +  +  + D LL
Sbjct: 180 SDMSMLIVGAVLVSILAIIADLLL 203



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 8/200 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   V+ L    +  V + + +A ++ +P+G+ +   P ++  +Q  A +L   P+   F
Sbjct: 11  DWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIALF 70

Query: 435 PLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++   S +        ++  +   +   I+ N     +      +E A    +T  + 
Sbjct: 71  GLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMTFGQR 130

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  TA         ++     G       GLG  I  S  +    
Sbjct: 131 LRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISRSDMS 183

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G +++    +  +  L
Sbjct: 184 MLIVGAVLVSILAIIADLLL 203


>gi|295102751|emb|CBL00296.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Faecalibacterium prausnitzii L2-6]
          Length = 257

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 84/238 (35%), Gaps = 23/238 (9%)

Query: 345 DIFWFCVVCGVAIGIA--------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            +FW  V    A  I          Q+IG +V      +    I     +  R+++   +
Sbjct: 15  SVFWLGVWQAAAAAIGQEVFLVSPVQAIGTLVELLPQAEFWQRIG---FSAGRILLGFGL 71

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
             +    + +       + + + P  QL+ A P   F  L +  VS    + ++ +S LM
Sbjct: 72  GVLSSAVLAVAAEKWEWVDALLAPVMQLVKATPVASFIILALVWVS--GSSLSVLISFLM 129

Query: 457 IFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +      +L++ V  G  +      E+A  F +   R  R + LP + P +  G   A G
Sbjct: 130 VL----PVLYSAVRTGIGSADRQLLEMAQVFRLPLGRRLRAVWLPAVLPAFRQGCSVALG 185

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             W + + +EV            +G  +  +    S  E+     ++        +  
Sbjct: 186 ICWKSGVAAEVIGLPDGS-----IGDALYRAKITLSTGELFAWTFVIILLSAVFEKLF 238



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 86/233 (36%), Gaps = 14/233 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V       +        P   +  +   L      Q    +  R+L    + +L + V A
Sbjct: 21  VWQAAAAAIGQEVFLVSPVQAIGTLVELLPQAEFWQRIGFSAGRILLGFGLGVLSSAVLA 80

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             A K   +  +L P++ ++++ P+  F+   +V+               ++   F   +
Sbjct: 81  VAAEKWEWVDALLAPVMQLVKATPVASFIILALVWVSG---------SSLSVLISFLMVL 131

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  ++   + +  R L E+++ FRL   ++   + +P  +P       +++   W   
Sbjct: 132 PVLYSAVRTGIGSADRQLLEMAQVFRLPLGRRLRAVWLPAVLPAFRQGCSVALGICWKSG 191

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           VA+E+I + D       IG  +  A        +      ++ +  ++++L  
Sbjct: 192 VAAEVIGLPDGS-----IGDALYRAKITLSTGELFAWTFVIILLSAVFEKLFL 239


>gi|256004032|ref|ZP_05429017.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|255991955|gb|EEU02052.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 2360]
 gi|316941724|gb|ADU75758.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum DSM 1313]
          Length = 253

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 94/251 (37%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F++V  I       I+E  +P     +         L  ++  T    +   ++ L+
Sbjct: 17  VVVFIIVWEIFTR-AKNIKEYILPAPSAILNEFITSGDLLLHHSMVTMTETVLGFILGLV 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + + L +  +    +  P + + Q+IPI+       V+F      K+I   L   F 
Sbjct: 76  LAILLSLLMSSFKLFRSIFYPFMFLSQTIPIIVVAPLITVWFGFGLVSKLIVCVLVVFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++ + L +  +DLEE+      S +Q F  L +P ++      + ++ +
Sbjct: 135 -------PIALNLTEGLSSYDKDLEELLMCMNASKFQIFMKLKLPSALVHFFSGLKIAAA 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQL 258
                 + SE            G+G ++  ++K     A+   +  +     L     +L
Sbjct: 188 YAVMGAIMSE------WTGAESGLGIFLTRSMKSFRTAAMFADIAIISIFSILLFGLIKL 241

Query: 259 LFRPMIVWSNK 269
           + +  I W+ K
Sbjct: 242 IEKRCIKWNVK 252



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +TM   V+  I+  ++ I + + +       S   PF  L    P  V  PL+ 
Sbjct: 55  LLHHSMVTMTETVLGFILGLVLAILLSLLMSSFKLFRSIFYPFMFLSQTIPIIVVAPLIT 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +  ++  +   L++ F     I  N+  G S++  D +E+    + + ++ +  + 
Sbjct: 115 VWFGFGLVSKLIVCVLVVFF----PIALNLTEGLSSYDKDLEELLMCMNASKFQIFMKLK 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    ++ +G   A   A   +I+SE           +GLG ++  S +      +   
Sbjct: 171 LPSALVHFFSGLKIAAAYAVMGAIMSEW------TGAESGLGIFLTRSMKSFRTAAMFAD 224

Query: 559 VLIMCCFVLAL 569
           + I+  F + L
Sbjct: 225 IAIISIFSILL 235


>gi|69249039|ref|ZP_00604854.1| Binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium DO]
 gi|68194298|gb|EAN08814.1| Binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium DO]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R+L   ++ + +I+Q+IP L  ++  ++    
Sbjct: 23  IRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISILIIGLGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  +  + +++ +V +   ++  Q+ + + +
Sbjct: 83  GV--------NVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  +I+ A 
Sbjct: 135 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATEGTSIILAG 187

Query: 246 -LTMLGVIFLYDQLL 259
            L    +  + D LL
Sbjct: 188 ALPTALMAIITDWLL 202



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y+           +  ++ A+++ IPVGI I  R  +++ +   A ++   P+     ++
Sbjct: 17  YIFAQFIRHFLISIYGVLFAAVVGIPVGIMISRRRKLANWVIRLANIIQTIPSLAMISIL 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + +   +   I+ N   G      +  +V     +T  +    +
Sbjct: 77  IIGLGLG----VNVVIVTVFLYSLLPIIKNTYTGMIQVDKNILDVGKGMGMTARQRLFMV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP      + G   A   A   + +      G       GLG  I   T       ++L
Sbjct: 133 ELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATEGTSIIL 185

Query: 558 G----VLIMCCFVLALNRFLWHPL 577
                  +M      L   L   L
Sbjct: 186 AGALPTALMAIITDWLLGILERRL 209


>gi|330895476|gb|EGH27788.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ ++++       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAIVVGVPLGVLMTRFPVLAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   L +  +  + D LL
Sbjct: 179 RSDMSMLIVGALLVSILAIIADLLL 203



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAIVVGVPLGVLMTRFPVLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G L++    +  +  L
Sbjct: 177 ISRSDMSMLIVGALLVSILAIIADLLL 203


>gi|324993129|gb|EGC25049.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK405]
 gi|324995568|gb|EGC27480.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK678]
          Length = 305

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 248

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 296



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQIVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 285


>gi|289628340|ref|ZP_06461294.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330869016|gb|EGH03725.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ +++L       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|289675923|ref|ZP_06496813.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330981891|gb|EGH79994.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 217

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ ++++       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAIVVGVPLGVLMTRFPVLAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAIVVGVPLGVLMTRFPVLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|170693813|ref|ZP_02884970.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170141231|gb|EDT09402.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 270

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 15/207 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+   +++S +     A        +     P + ++  IP L  L    
Sbjct: 71  LWADTVSSLRRLGIGLLVSAVIALAAAIATGSFPLVSATFSPFITVVSMIPPLAVLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   ++     IP +L   +++   + W   
Sbjct: 131 IVFGLD--------ELSKVVLIVVGITPMIIRDLHSRAREIPAELWVKAQTLGANSWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P  +P L+  + +S+   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRLVLPQLLPRLLVAIRLSLGAAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDL 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           IL  +  +  + +L D+ L R +  WS
Sbjct: 237 ILPYVAWITLLAWLIDECL-RRVTQWS 262



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 78/199 (39%), Gaps = 11/199 (5%)

Query: 378 YVIWLGCITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++W   ++  R + + ++++++I +   I  G  P +S+   PF  +++  P     P+
Sbjct: 69  YLLWADTVSSLRRLGIGLLVSAVIALAAAIATGSFPLVSATFSPFITVVSMIPPLAVLPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    I+ ++ + A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VVLIVVGITPMIIRDLHSRAREIPAELWVKAQTLGANSWTLILR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP + P  +     + G AW   I +E  +       T GLG  I       +   ++
Sbjct: 185 LVLPQLLPRLLVAIRLSLGAAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDLIL 238

Query: 557 LGVLIMCCFVLALNRFLWH 575
             V  +      ++  L  
Sbjct: 239 PYVAWITLLAWLIDECLRR 257


>gi|163744657|ref|ZP_02152017.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Oceanibulbus indolifex HEL-45]
 gi|161381475|gb|EDQ05884.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Oceanibulbus indolifex HEL-45]
          Length = 274

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T     +  ++ + +   + + I F   +   + P+       P     P++
Sbjct: 70  SLVYHTWVTFSATFLGFVMGTALGTLLAVGIVFNRTMDMSVMPWVIASQTIPILAIAPMI 129

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   L+  L  +++ ++ + + ++  ++ G  +      +   ++H +GW+ +  +
Sbjct: 130 IVVLNAVGLSGLLPKAIISMYLSFFPVVVGMVKGLRSPDQMQLDQMRTWHASGWQTFWKL 189

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY+ T        +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 190 RLPSSMPYFFTSLKVGVAASLVGAIVGEMPTGA-----VAGLGARLLAGSYYGQTVQIW 243



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  +   T        V+      + A     +R 
Sbjct: 46  LPAPHQVGAELWETTVMKKVTSKRSLVYHTWVTFSATFLGFVMGTALGTLLAVGIVFNRT 105

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M 
Sbjct: 106 MDMSVMPWVIASQTIPILAIAPMIIVVLNAVGLSGLLPKAIISMYLSF----FPVVVGMV 161

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   +  R++  SGWQ FW L +P SMP    ++ + ++      +  EM   
Sbjct: 162 KGLRSPDQMQLDQMRTWHASGWQTFWKLRLPSSMPYFFTSLKVGVAASLVGAIVGEM--- 218

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 219 --PTGAVAGLGARLLAGSYYGQTVQIW 243


>gi|325661117|ref|ZP_08149744.1| hypothetical protein HMPREF0490_00477 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472624|gb|EGC75835.1| hypothetical protein HMPREF0490_00477 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 269

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  +V  ++   I +   + + F P +S  ++P+  +L + P +   PL+
Sbjct: 71  SIFLHVGVTVYETIVSFLLVIFIALLCAVLLWFSPKLSEIMEPYLVVLNSLPKSALAPLL 130

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + ++         +  ++  + H T +     +
Sbjct: 131 IVWLGATQTTIIVSGMSVAIFGS----ILSLYTSFHTVDQEKIKLIYTLHGTRFHALTKV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++      G      I+ E  +         GLG  I  S++      +++
Sbjct: 187 VIPHSIPAIISNMKVNIGLCLVGVIIGEFLA------ARNGLGYLIIYSSQVFKLDWLLM 240

Query: 558 GVLIMCCFVLAL 569
            ++++C   + L
Sbjct: 241 AIVLLCILAMFL 252



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 74/192 (38%), Gaps = 14/192 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + ++ +    + A L   S +L  ++ P L ++ S+P        +V+ 
Sbjct: 75  HVGVTVYETIVSFLLVIFIALLCAVLLWFSPKLSEIMEPYLVVLNSLPKSALAPLLIVWL 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            S+Y S   + ++  ++  +   + +     +
Sbjct: 135 GATQTTIIVSGMSVAIFGSI--------LSLYTSFHTVDQEKIKLIYTLHGTRFHALTKV 186

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +   +      G+G  I  + +   L  +L 
Sbjct: 187 VIPHSIPAIISNMKVNIGLCLVGVIIGEFLAARN------GLGYLIIYSSQVFKLDWLLM 240

Query: 244 AMLTMLGVIFLY 255
           A++ +  +    
Sbjct: 241 AIVLLCILAMFL 252


>gi|254713226|ref|ZP_05175037.1| ABC transporter, permease protein [Brucella ceti M644/93/1]
 gi|254716420|ref|ZP_05178231.1| ABC transporter, permease protein [Brucella ceti M13/05/1]
 gi|261218206|ref|ZP_05932487.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261320946|ref|ZP_05960143.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|260923295|gb|EEX89863.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261293636|gb|EEX97132.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
          Length = 258

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALMANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 87/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALMANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  + LA     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLLANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|242372101|ref|ZP_04817675.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W1]
 gi|242350213|gb|EES41814.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis M23864:W1]
          Length = 211

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 71/179 (39%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +K+ R   V++ I  ++Q+IP L  L   +  F           +  AI 
Sbjct: 32  VVAVPIGILLSKTTRTANVVLTIAGVLQTIPTLAVLAIMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ +  +S  ++  Q    + +P ++P ++  + +S 
Sbjct: 84  ALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTKMQLMKDVELPLALPLIISGIRLSS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  +  G       G+G  +   +       I+ A + +  +  + D LL
Sbjct: 144 VYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLALIVDFLL 195



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISIIALLIAIVVAVPIGILLSKTTRTANVVLTIAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T  +  + + LP   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTKMQLMKDVELPLALPLI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDFLL 195


>gi|161503354|ref|YP_001570466.1| hypothetical protein SARI_01427 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864701|gb|ABX21324.1| hypothetical protein SARI_01427 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 215

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 86/213 (40%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++ +  ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGVATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGVATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|302188820|ref|ZP_07265493.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 217

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 78/205 (38%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ ++++       L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAIVVGVPLGVLMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|238917329|ref|YP_002930846.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
 gi|238872689|gb|ACR72399.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
          Length = 254

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 89/231 (38%), Gaps = 13/231 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +I    +   + +    Q +G +   +   D    +W    TM+ +V   +   +  I
Sbjct: 27  LWEIAALKIDSPILLVTPVQVLGRLFTIWHEPDFAGTVW---FTMYHIVGGFLAGLLCGI 83

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              +       +   + P+   + A P   F  +V+  + +   N +++++ L++    +
Sbjct: 84  ICAVLAYICKPVEYILWPWMVTIKAVPVASF--VVICLIWFTAKNLSVFIAFLIVVPVIY 141

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
               N + G  +     +E+A  FHI   R  RYII+P + PY ++      G AW A +
Sbjct: 142 Q---NTLTGLRSTDKGIREMADVFHIPWIRRIRYIIMPQLSPYLISAGRVTAGMAWKAGV 198

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +E+       +      + I          +++   +I+    +   + +
Sbjct: 199 AAEIIGMPKGSVGQMLYMSKI-----YLDTDDLLAWTVIIVVLSVIFEKLV 244



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 101/246 (41%), Gaps = 15/246 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS---R 67
           I+++I   I+ +LA +L + +  I    I    +    V ++     +   P +A     
Sbjct: 7   INKKILNVIYKVLAVMLALILWEIAALKIDSPILLVTPVQVLGRLFTIWHEPDFAGTVWF 66

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++   +  LL   + A LA   + +  +L P +  ++++P+  F+   +++F    
Sbjct: 67  TMYHIVGGFLAGLLCGIICAVLAYICKPVEYILWPWMVTIKAVPVASFVVICLIWFTAKN 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                     ++F  F   V  +  +    L +  + + E++  F +   ++  Y+ +P 
Sbjct: 127 ---------LSVFIAFLIVVPVIYQNTLTGLRSTDKGIREMADVFHIPWIRRIRYIIMPQ 177

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P L+    ++    W   VA+E+I +    +       Y++    + D L     ++ 
Sbjct: 178 LSPYLISAGRVTAGMAWKAGVAAEIIGMPKGSVGQM---LYMSKIYLDTDDLLAWTVIIV 234

Query: 248 MLGVIF 253
           +L VIF
Sbjct: 235 VLSVIF 240


>gi|125717781|ref|YP_001034914.1| phosphate ABC transporter transmembrane protein [Streptococcus
           sanguinis SK36]
 gi|323351783|ref|ZP_08087437.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis VMC66]
 gi|125497698|gb|ABN44364.1| ABC transporter membrane-spanning permease-phosphate transport,
           putative [Streptococcus sanguinis SK36]
 gi|322122269|gb|EFX93995.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis VMC66]
 gi|324990873|gb|EGC22808.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK353]
 gi|325687892|gb|EGD29912.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK72]
 gi|325689910|gb|EGD31914.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK115]
 gi|325694312|gb|EGD36226.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK150]
 gi|325696845|gb|EGD38733.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK160]
 gi|327461397|gb|EGF07728.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1]
 gi|327469554|gb|EGF15023.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK330]
 gi|327474032|gb|EGF19445.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK408]
 gi|327489255|gb|EGF21048.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1058]
 gi|328946083|gb|EGG40229.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1087]
 gi|332359768|gb|EGJ37583.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK49]
 gi|332361482|gb|EGJ39286.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1056]
          Length = 305

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 248

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 296



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQIVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 285


>gi|29141197|ref|NP_804539.1| permease transmembrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213852439|ref|ZP_03381971.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|29136823|gb|AAO68388.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 389

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 90/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++ + +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|302023877|ref|ZP_07249088.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           suis 05HAS68]
          Length = 304

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 18/221 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYASRTTLR 71
           +   L   L++ I+ ++L  + +  +    VD V IT        +  S    A      
Sbjct: 25  VITFLCLSLIVFIVAMILIFVAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISG 84

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
                ++S +     A  AA        +R   +L P+++++  IP + +    L   V 
Sbjct: 85  SFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVP 144

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E S +   + WQ  W
Sbjct: 145 FVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIW 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + +  + PG+   ++  M+  +   +A +M+V    VIP 
Sbjct: 204 RVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPT 244



 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFP 429
               +   + +   +    ++  ++A+ I I   +++        +  +QP  +LL   P
Sbjct: 71  PSSKIFGALPMISGSFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIP 130

Query: 430 ANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           + V+         P V S      + +   +++  +MI  T   + F  +    A P  +
Sbjct: 131 SVVYGFIGLQVVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E + +   T W+    +IL    P   T  I     A+  ++  ++       + T+
Sbjct: 188 REASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 245


>gi|187732817|ref|YP_001879541.1| ABC transporter quaternary amine uptake (QAT) family, permease
           [Shigella boydii CDC 3083-94]
 gi|187429809|gb|ACD09083.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella boydii CDC 3083-94]
          Length = 385

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGEIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQIVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F      +I     ++   P+   F L+++ ++      
Sbjct: 185 --FGAVLPALVIGVPLGIWCYFSTARQGEIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQIVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|312958929|ref|ZP_07773448.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311286699|gb|EFQ65261.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 217

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+++++        L  +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVILAIFVGVPLGILMTRYPTLAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYD 256
             D+  ++   + +  +    D
Sbjct: 179 RSDMSMLIVGAVLVSLLAIFAD 200



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 11/204 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + +I+A  + +P+GI +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVILAIFVGVPLGILMTRYPTLAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
             +     +++G +++    +  +
Sbjct: 177 ISRSDMSMLIVGAVLVSLLAIFAD 200


>gi|254486569|ref|ZP_05099774.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043438|gb|EEB84076.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 272

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+   + I++ + + +G+ IG  P   + + PF   ++  P     P++   +    
Sbjct: 78  SLKRLAAGLGISTALALVIGVCIGILPFFRALLAPFVSFVSMVPPLALLPILFISMGLGE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       L++ G    ++ ++     A P +    A +   + W     I+LP   P 
Sbjct: 138 TSK----IALIVIGVAPIMIRDLAQTVLALPREQIVKAETLSASSWLIALRIVLPQALPR 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +       G A+   I +E  S        +GLG  I       S   +   V  +   
Sbjct: 194 LLGSLRLQLGPAFLFLIAAEAIS------ADSGLGYRIFLVRRYLSMDIIFPYVAWITFL 247

Query: 566 V----LALNRFLWHPLYLYGT 582
                  ++RF    L+ +  
Sbjct: 248 AASADFGIDRF-RRWLFPWSQ 267



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+ + + IS     V             +L P +  +  +P L  L    
Sbjct: 71  LWTDTWSSLKRLAAGLGISTALALVIGVCIGILPFFRALLAPFVSFVSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I       M   + Q++  +PR+    + +   S W   
Sbjct: 131 ISMGLG--------ETSKIALIVIGVAPIMIRDLAQTVLALPREQIVKAETLSASSWLIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L+ ++ + +   + F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRIVLPQALPRLLGSLRLQLGPAFLFLIAAEAISADS------GLGYRIFLVRRYLSMDI 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           I   +  +  +    D  + R
Sbjct: 237 IFPYVAWITFLAASADFGIDR 257


>gi|325068798|ref|ZP_08127471.1| binding-protein-dependent transport systems inner membrane
           component [Actinomyces oris K20]
          Length = 331

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 10/158 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
              S  + P+     A P     PL+V  + Y  L   +  + ++ F     I   V+ G
Sbjct: 161 RFFSRAVLPYVAASQAVPGIALAPLLVLWIGYGTLPVVILCAFMVFF----PITITVLLG 216

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                 D  + A      G     ++ LP   P   TG  T    +   ++V E+   G 
Sbjct: 217 LRGLDTDIIDAARLDGAYGLSMLVHMELPMTLPAIYTGLRTGFTLSITGAVVGEMIMGGD 276

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 GLG  ++   +K     +   + ++C     +
Sbjct: 277 ------GLGMLLSTQRDKVDTTGMFSTIALLCILATTI 308



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 14/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +V+ + + L    L  YA  T    L   +++  F    A +    R     ++
Sbjct: 109 LPSPLAVVNRMWLGLTQAGLAAYAGVTLKEALLGCLLAAAFALPLAWVLHHWRFFSRAVL 168

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P +      V++      G +    L A    F      +T ++   L  +
Sbjct: 169 PYVAASQAVPGIALAPLLVLWIGY---GTLPVVILCAFMVFF-----PITITVLLGLRGL 220

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D+ + +R     G     ++ +P ++P +   +    +      V  EMI+ GD    
Sbjct: 221 DTDIIDAARLDGAYGLSMLVHMELPMTLPAIYTGLRTGFTLSITGAVVGEMIMGGD---- 276

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  ++    + D   +   +  +  +       L
Sbjct: 277 --GLGMLLSTQRDKVDTTGMFSTIALLCILATTIHWAL 312


>gi|114769444|ref|ZP_01447070.1| glycine betaine/proline ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550361|gb|EAU53242.1| glycine betaine/proline ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 370

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 8/133 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   ++ A  IS +   +    A K  +    L P+L ++Q++P   +L   V++F 
Sbjct: 235 AMETLSVLVVAAPISFIIGLLLGIAAWKFAKFDKFLRPLLSVLQTLPFFTYLLPAVIFFK 294

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G   GA    I+AI       M       L  +  ++ E  +    S WQ    + 
Sbjct: 295 V---GPTAGAMATIIYAIP-----PMILMTTLGLKKVSPEIVEAGKMAGCSRWQMLSKVY 346

Query: 185 VPFSMPGLVWNMM 197
           +P +   L+  ++
Sbjct: 347 IPAARTELLVGLI 359



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 5/180 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
              I     V G  +G  W+        F +  ++    L   T+  +VV   I+ II +
Sbjct: 196 WSSIAATAAVIGYYLG-GWRLALLGGGTFIWTALIGQWKLAMETLSVLVVAAPISFIIGL 254

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI           ++P   +L   P   FF  ++  V ++ + P       +I+    
Sbjct: 255 LLGIAAWKFAKFDKFLRPLLSVLQTLP---FFTYLLPAVIFFKVGPTAGAMATIIY-AIP 310

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++     G      +  E       + W+    + +P      + G I      W    
Sbjct: 311 PMILMTTLGLKKVSPEIVEAGKMAGCSRWQMLSKVYIPAARTELLVGLIKLLCFVWQWLF 370


>gi|16761107|ref|NP_456724.1| permease transmembrane component [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|25511853|pir||AB0778 probable permease transmembrane component STY2394 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503405|emb|CAD02544.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi]
          Length = 389

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 90/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++ + +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|308063394|gb|ADO05281.1| osmoprotection protein (proWX) [Helicobacter pylori Sat464]
          Length = 553

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VA+ +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAVLLKISVVKHLIQEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADQFV 236


>gi|312132425|ref|YP_003999764.1| tauc [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772942|gb|ADQ02430.1| TauC [Bifidobacterium longum subsp. longum BBMN68]
          Length = 260

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  ++  + V      L H           +    I    ++L   A+ T    
Sbjct: 8   KRRMPTVIAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIET-WNTLGPAAAITGYEG 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   + ++ F  +       S        P+L   Q++P++      +++F     GK  
Sbjct: 67  VVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGK-- 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 125 ------IVIVAIFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQI 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
              + +S +  +     +E +          G+G ++  A        I  A + ++ +
Sbjct: 179 YGGIRVSAAYIFATASTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATIVIILM 231



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  +A+   W  +G++              T +    +     IT +  VV  + A 
Sbjct: 15  IAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAV 74

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++   P        P     PL +    +      + +++  +F
Sbjct: 75  FFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAIFGLF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 135 ----PIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYGGIRVSAAYIF 190

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    +++      L
Sbjct: 191 ATASTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATIVIILMTCVL 235


>gi|210615851|ref|ZP_03290813.1| hypothetical protein CLONEX_03031 [Clostridium nexile DSM 1787]
 gi|210150054|gb|EEA81063.1| hypothetical protein CLONEX_03031 [Clostridium nexile DSM 1787]
          Length = 265

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 76/196 (38%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  +V   +  +  + V I + F P +S  ++PF  +L + P +   PL+
Sbjct: 69  SIFLHITVTLYETLVSFFLVILCSLLVTILLWFSPKLSEILEPFLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+         +  ++  + H   +     +
Sbjct: 129 IVWLGATRTTIIVAGMSVAIFGS----ILNLYTTFINADKEKIKLIYTLHGNRFHALMKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  ++      G      I+ E  +         GLG  I  S++      +++
Sbjct: 185 VLPSSIPAIISNMKVNIGLCLVGVIIGEFLA------ARNGLGYLIIYSSQVFKLDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L   +
Sbjct: 239 SIVLLCIMAMGLYALI 254



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 77/196 (39%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + T    L +  + +L + +   L   S +L  +L P L ++ S+P        +V+ 
Sbjct: 73  HITVTLYETLVSFFLVILCSLLVTILLWFSPKLSEILEPFLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y +  N  ++  ++  +   + +     +
Sbjct: 133 GATRTTIIVAGMSVAIFGSI--------LNLYTTFINADKEKIKLIYTLHGNRFHALMKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +   +      G+G  I  + +   L  +L 
Sbjct: 185 VLPSSIPAIISNMKVNIGLCLVGVIIGEFLAARN------GLGYLIIYSSQVFKLDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +      L+
Sbjct: 239 SIVLLCIMAMGLYALI 254


>gi|296505250|ref|YP_003666950.1| ABC transporter permease [Bacillus thuringiensis BMB171]
 gi|296326302|gb|ADH09230.1| ABC transporter permease protein [Bacillus thuringiensis BMB171]
          Length = 268

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWVARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLTKWIDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|317048194|ref|YP_004115842.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949811|gb|ADU69286.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 215

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  SL     + T  +L A+  +++       L  + + L   ++ I  I+ +IP +   
Sbjct: 10  NWDSLLALTWQHTWLVLVAVGFAIIVGVPLGILIVRFKWLATPVLGIATIVLTIPTIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L N+P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALENLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGLQL-------LDGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R     + K
Sbjct: 180 DVRMLIAGALMICLLAIVLDWLLHRLQSALTPK 212



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +   ++ L     + V+V +  A I+ +P+GI I     +++ +   A ++   P
Sbjct: 5   HYIMDNWDSLLALTWQHTWLVLVAVGFAIIVGVPLGILIVRFKWLATPVLGIATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               F L++   S          ++  +   +   I+ N        P   +E      +
Sbjct: 65  TIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALENLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L+         +   
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGLQL-------LDGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDVRMLIAGALMICLLAIVLDWLLHR 204


>gi|194289623|ref|YP_002005530.1| glycine/betaine ABC transporter substrate-binding protein
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223458|emb|CAQ69463.1| putative ABC-type glycine betaine transport system,
           Substrate-binding inner membrane component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 493

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 22/211 (10%)

Query: 40  QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99
           +    P    + +   L     P+ A R    +  A+  + L       LAA+ RR G +
Sbjct: 274 RSAPAPAGARNRLLAALLGPDTPRLARRHVGLVAGAVGAATLVGVPLGMLAARRRRTGQL 333

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           ++  + ++Q++P L  L   +     +           A+ A+F   +  +  +    L 
Sbjct: 334 VLGAVSVLQTVPSLALLAMLIPLLGRIG-------VWPAMVALFLYALLPIVRNTATGLE 386

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P+ + + +R+  L G Q   Y+ +P ++P L+  +             + +I VG   
Sbjct: 387 QVPQGMRDAARALGLRGAQVLRYVELPLALPVLLAGVKT-----------AAIISVGTAT 435

Query: 220 IPLP----GIGSYIALAIKEQDLLAILYAML 246
           I       G G  IA  +   D   +L   +
Sbjct: 436 IAAFVGAGGFGERIATGLALNDTTLLLAGAI 466



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 10/171 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +  A+++ +P+G+    R      +     +L   P+     +++  +    + P 
Sbjct: 306 VAGAVGAATLVGVPLGMLAARRRRTGQLVLGAVSVLQTVPSLALLAMLIPLLGRIGVWPA 365

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +    L        I+ N   G    P   ++ A +  + G +  RY+ LP   P  + G
Sbjct: 366 MVALFLY---ALLPIVRNTATGLEQVPQGMRDAARALGLRGAQVLRYVELPLALPVLLAG 422

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             TA   +   + ++     G       G G  IA          ++ G +
Sbjct: 423 VKTAAIISVGTATIAAFVGAG-------GFGERIATGLALNDTTLLLAGAI 466


>gi|332366473|gb|EGJ44221.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis SK1059]
          Length = 305

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 248

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 296



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQIVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 285


>gi|315222700|ref|ZP_07864589.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           anginosus F0211]
 gi|319938947|ref|ZP_08013311.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|315188386|gb|EFU22112.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           anginosus F0211]
 gi|319811997|gb|EFW08263.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 303

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 68  NPSGKEFGALPMILGSFLVTLLSALLATPFAIGAAVFMTEVSPKGSKILQPAIELLVGIP 127

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 128 SVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 186

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 187 ASMAMGATRWQTIWRVTLKAARSGIFTAIVFGMARAFGEALAIQMVVGNSAVIPT 241



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  ++A+   I   +++    P  S  +QP  +LL   P+ V+  
Sbjct: 74  FGALPMILGSFLVTLLSALLATPFAIGAAVFMTEVSPKGSKILQPAIELLVGIPSVVYGF 133

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 134 IGLQVVVPFVRSIFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASMA 190

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 191 MGATRWQTIWRVTLKAARSGIFTAIVFGMARAFGEALAIQMVVGNSAVIPTS 242


>gi|297380020|gb|ADI34907.1| osmoprotection protein (proWX) [Helicobacter pylori v225d]
          Length = 553

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAIVLKISVVKHLIKEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLILYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLILYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|16760370|ref|NP_455987.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141866|ref|NP_805208.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213428720|ref|ZP_03361470.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213584798|ref|ZP_03366624.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213649080|ref|ZP_03379133.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213865337|ref|ZP_03387456.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|25306100|pir||AD0681 probable ABC transporter membrane protein STY1572 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502665|emb|CAD01821.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137494|gb|AAO69057.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 215

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLAPK 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 8/218 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 ++ G L++C   + L+  L     +   + +R
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHRLQVVLAPKGIR 215


>gi|313888148|ref|ZP_07821822.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845838|gb|EFR33225.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 254

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 89/250 (35%), Gaps = 17/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +LV+        G+    +P+ +  +     D  ++  +   T       + + + 
Sbjct: 17  LIVIILVLWHFATTYGGVSAFMLPKPLDVVKAFVNDFPTISSHMGTTLTEAFLGLSVGVT 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A L   S  L     PIL I Q++P +      V++             +  I  
Sbjct: 77  LGFLVALLMDLSDTLYSAFYPILVISQTVPTVAIAPLLVLWMGYGV--------MPKIAL 128

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +  S+ ++   +  D  ++ ++     ++ + Y+  P S+        +++S
Sbjct: 129 IVIGTFFPIAVSLLEAFKQVDPDKTKLLKAMGAGKYEIYKYIKFPESLTNFFAAFKIAVS 188

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260
                 V +E +          G+G Y+    K      +   +  +  +  +  +L+  
Sbjct: 189 YSVVGAVIAEWLGG------YKGLGVYMIRVQKNYSFDKMFAVIFLISAISLILMKLVSF 242

Query: 261 --RPMIVWSN 268
             R ++ W+ 
Sbjct: 243 IQRKVMPWTE 252



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 10/238 (4%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           S   +  ++ + W        +          V      D   +      T+    + + 
Sbjct: 13  SAASLIVIILVLWHFATTYGGVSAFMLPKPLDVVKAFVNDFPTISSHMGTTLTEAFLGLS 72

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           +   +   V + +     + S   P   +    P     PL+V  + Y      +    L
Sbjct: 73  VGVTLGFLVALLMDLSDTLYSAFYPILVISQTVPTVAIAPLLVLWMGYG----VMPKIAL 128

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ GT + I  +++        D  ++  +     +  ++YI  P     +      A  
Sbjct: 129 IVIGTFFPIAVSLLEAFKQVDPDKTKLLKAMGAGKYEIYKYIKFPESLTNFFAAFKIAVS 188

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   ++++E            GLG Y+    +  SF ++   + ++    L L + +
Sbjct: 189 YSVVGAVIAEWLGGYK------GLGVYMIRVQKNYSFDKMFAVIFLISAISLILMKLV 240


>gi|306826137|ref|ZP_07459472.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304431613|gb|EFM34594.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 238

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +  +    + +  +P  +  +     D   L  ++  T    L  +V+ +
Sbjct: 2   GFLGVLSIWQLAGVFKL-LPKFILPTPLEILQSFVRDREFLWYHSWATLRVALLGLVLGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLSWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 47  ATLRVALLGLVLGVLIACLMAVLMDSLSWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 107 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 162

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 163 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|125974606|ref|YP_001038516.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|281419131|ref|ZP_06250148.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
 gi|125714831|gb|ABN53323.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum ATCC 27405]
 gi|281407280|gb|EFB37541.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium thermocellum JW20]
          Length = 253

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 18/251 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F++V  I       I+E  +P     +         L  ++  T    +   ++ L+
Sbjct: 17  VVVFIIVWEIFTR-AKNIKEYILPAPSAILNEFITSGDLLLHHSMVTMTETVLGFILGLV 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + + L +  +    +  P + + Q+IPI+       V+F      K+I   L   F 
Sbjct: 76  LAILLSLLMSSFKLFRSIFYPFMFLSQTIPIIVVAPLITVWFGFGLVSKLIVCVLVVFF- 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++ + L +  +DLEE+      S  Q F  L +P ++      + ++ +
Sbjct: 135 -------PIALNLTEGLSSYDKDLEELLMCMNASKLQIFMKLKLPSALVHFFSGLKIAAA 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQL 258
                 + SE            G+G ++  ++K     A+   +  +     L     +L
Sbjct: 188 YAVMGAIMSE------WTGAESGLGIFLTRSMKSFRTAAMFADIAIISIFSILLFGLIKL 241

Query: 259 LFRPMIVWSNK 269
           + +  I W+ K
Sbjct: 242 IEKRCIKWNVK 252



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +TM   V+  I+  ++ I + + +       S   PF  L    P  V  PL+ 
Sbjct: 55  LLHHSMVTMTETVLGFILGLVLAILLSLLMSSFKLFRSIFYPFMFLSQTIPIIVVAPLIT 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +  ++  +   L++ F     I  N+  G S++  D +E+    + +  + +  + 
Sbjct: 115 VWFGFGLVSKLIVCVLVVFF----PIALNLTEGLSSYDKDLEELLMCMNASKLQIFMKLK 170

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP    ++ +G   A   A   +I+SE           +GLG ++  S +      +   
Sbjct: 171 LPSALVHFFSGLKIAAAYAVMGAIMSEW------TGAESGLGIFLTRSMKSFRTAAMFAD 224

Query: 559 VLIMCCFVLAL 569
           + I+  F + L
Sbjct: 225 IAIISIFSILL 235


>gi|149020117|ref|ZP_01835091.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP23-BS72]
 gi|147930795|gb|EDK81776.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP23-BS72]
          Length = 238

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  +L+  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLLIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|332528711|ref|ZP_08404688.1| TauC [Hylemonella gracilis ATCC 19624]
 gi|332041777|gb|EGI78126.1| TauC [Hylemonella gracilis ATCC 19624]
          Length = 271

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + + +R+   + I+ L   V+   A     L   L P++ ++  +P L  L    
Sbjct: 71  LWSDTAASLIRLGLGLGIAALTGLVFGVAAGVFPLLRAPLSPMMTVVSMVPPLAVLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +   + Q    IP++L   +++   + W   
Sbjct: 131 IVFGLD--------ELSKVMLIVIGVAPILARDLEQRAREIPQELFVKAQTLGANSWTLV 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +  L+ ++ + +   W F++++E I          G+G  I L  +   +  
Sbjct: 183 LRVVLPQLLSRLLVSLRLMLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           IL  ++ +  + +L D  L R +  W
Sbjct: 237 ILPYVVWITLLAWLMDWGL-RGLNRW 261



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 13/202 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + IA++  +  G+  G  P + + + P   +++  P     P++      
Sbjct: 76  AASLIRLGLGLGIAALTGLVFGVAAGVFPLLRAPLSPMMTVVSMVPPLAVLPILFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +     W     ++LP + 
Sbjct: 136 DELSK----VMLIVIGVAPILARDLEQRAREIPQELFVKAQTLGANSWTLVLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +       G AW   I +E  S       T GLG  I       +   ++  V+ + 
Sbjct: 192 SRLLVSLRLMLGSAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPYVVWIT 245

Query: 564 CFVLALN---RFLWHPLYLYGT 582
                ++   R L   L+ +  
Sbjct: 246 LLAWLMDWGLRGLNRWLFPWSE 267


>gi|294632874|ref|ZP_06711433.1| aliphatic sulfonates ABC transporter, permease [Streptomyces sp.
           e14]
 gi|292830655|gb|EFF89005.1| aliphatic sulfonates ABC transporter, permease [Streptomyces sp.
           e14]
          Length = 250

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 10/152 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
              G +  +++ + P    L   PA    PL  +         +L ++  +      Y  
Sbjct: 79  FLTGNQRRVAALVNPLMSFLRPIPAIALVPLATAWFGIGEQAKHLLIAYAVFLAVWLY-- 136

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             V  G +  P D+   A +  ++  R    ++LP   P  V       G A+ A + +E
Sbjct: 137 --VHDGVARVPADYLRAARTLGVSRRRRLTEVLLPAAAPSVVAALRYGAGLAFLALVAAE 194

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +          +G+   +    +      + +
Sbjct: 195 LGG------AQSGIAYRLQVDGQFLRTDHMFV 220



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 56/170 (32%), Gaps = 8/170 (4%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P   +          ++      +  R                 L    RR+  ++ P
Sbjct: 34  PTPWQTLRAAHAMWSDGTMTTDLRASLARAGQGFAAGAAAGTALGFLTGNQRRVAALVNP 93

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  ++ IP +  +     +F      K +    A   A+           ++  +  +P
Sbjct: 94  LMSFLRPIPAIALVPLATAWFGIGEQAKHLLIAYAVFLAV--------WLYVHDGVARVP 145

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            D    +R+  +S  ++   + +P + P +V  +       +  +VA+E+
Sbjct: 146 ADYLRAARTLGVSRRRRLTEVLLPAAAPSVVAALRYGAGLAFLALVAAEL 195


>gi|194442707|ref|YP_002041435.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194401370|gb|ACF61592.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
          Length = 377

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 169 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 228

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 229 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 288

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  +  + + M       V + +I  G       G G+ +   +   
Sbjct: 289 GQRFRHVQLPLALPVFLRGLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 341

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 342 AIDLVLLGVIPVIALAVVIDALF 364



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 117 DAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 176

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 177 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 234

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 235 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 294

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++ G           ++V+ +   G       G GA + +     +   V+
Sbjct: 295 VQLPLALPVFLRGLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 347

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 348 LGVIPVIALAVVIDALF 364


>gi|148269857|ref|YP_001244317.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
 gi|147735401|gb|ABQ46741.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
          Length = 243

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ + +V   I   + +PVG  +G    +   ++P   ++ A P   +  +V+     
Sbjct: 50  LSTLLKGLVTTFIVIAVGLPVGFVMGISDRMYEFLRPLVTVVQAVPVVSWLVVVIFLWGI 109

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               P +  SL +I       +F  ++G  +      EV   + +      + + L  I+
Sbjct: 110 GWQGPVVISSLSLIPVA----VFTTVSGVRSVDRKLLEVMKVYRVPRRTILKEVYLGSIW 165

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ ++    + G  W A ++ E            GLG  I+ + +    P V    +   
Sbjct: 166 PFVLSILEVSSGNVWKAVVMGEYLCGD------RGLGVLISWARQYVDVPRVYALTIFTV 219

Query: 564 CFVLALNR 571
              ++  R
Sbjct: 220 VLGISFER 227



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +L  ++V  +++ L         P +  ++    L+  +  +    T L+ L    I
Sbjct: 4   VFGILLVLIVWHLLHFLFPSSLILPGPVETFEVFVKILNRETF-EALLSTLLKGLVTTFI 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +        +   S R+   L P++ ++Q++P++ +L   +  +   + G V+ + L+ 
Sbjct: 63  VIAVGLPVGFVMGISDRMYEFLRPLVTVVQAVPVVSWLVVVIFLWGIGWQGPVVISSLSL 122

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I            F+    + ++ R L EV + +R+        + +    P ++  + +
Sbjct: 123 IPVA--------VFTTVSGVRSVDRKLLEVMKVYRVPRRTILKEVYLGSIWPFVLSILEV 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           S    W  VV      +G+ +    G+G  I+ A +  D+  +    LT+  V+ 
Sbjct: 175 SSGNVWKAVV------MGEYLCGDRGLGVLISWARQYVDVPRVYA--LTIFTVVL 221


>gi|259503284|ref|ZP_05746186.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
 gi|259168739|gb|EEW53234.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
          Length = 218

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 17/211 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++ + + +  L +L+A+ I+L+   V   +  + R     LV    ++ S+P   F 
Sbjct: 8   NWPTMIEDSQQHALMVLTAIGIALVAALVITLVFLRRRNWLKGLVYFFSLLYSVPSFAF- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F  L P   +G    AI  + T   + +  S   +L  I   L EV+    ++ 
Sbjct: 67  ------FALLLPLSGLGMR-TAIIVLATYAEYILLRSFITALQGIDPQLLEVASGMGMTR 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F+ + +P ++P +   + ++++        +  I  G       G+G  +   ++ Q
Sbjct: 120 QQVFYKVQLPLALPAIFSGLQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQ 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
            L  IL+   T+L VI          +I WS
Sbjct: 173 QLAPILWG--TILTVILTLICAGCLRLIEWS 201



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  I IA +  + + +    R +    +  F  LL + P+  FF L++           
Sbjct: 23  VLTAIGIALVAALVITLVFLRRRNWLKGLVYFFSLLYSVPSFAFFALLLPLSGLGMRT-- 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +++    ++ +L + I           EVAS   +T  + +  + LP   P   +G
Sbjct: 81  --AIIVLATYAEYILLRSFITALQGIDPQLLEVASGMGMTRQQVFYKVQLPLALPAIFSG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   + G       GLG  + E  +      ++ G ++     L  
Sbjct: 139 LQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQQLAPILWGTILTVILTLIC 191


>gi|296444863|ref|ZP_06886825.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Methylosinus trichosporium OB3b]
 gi|296257531|gb|EFH04596.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Methylosinus trichosporium OB3b]
          Length = 497

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 77/221 (34%), Gaps = 16/221 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             ++  +P       + +        +  ++  +         +AA+  RLG + +    
Sbjct: 281 FGVIASLPSRGLAERVWRRTLEHIFLVGVSLAAAAAVALPLGVMAARRPRLGRITLAAAG 340

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++Q+IP L  L F +                 AI A+F   +  +  ++   +  IP  +
Sbjct: 341 LLQTIPSLALLVFMIPLLGLG--------AAPAIVALFLYSLLPILRNVATGVSGIPASI 392

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +    LS W++   + +P +   ++  +  +       ++      +G  +I   G 
Sbjct: 393 RNSAIVLGLSPWRRLLLVELPMASRAILAGLETA------AIINIGTATLG-ALIGAGGY 445

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           G  I   ++  ++  IL   +    +     Q +F     W
Sbjct: 446 GEPIFTGVRLDNMGLILEGAVPAALMALAA-QGVFALAEAW 485



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 4/146 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F V V +  A+ + +P+G+    RP +       A LL   P+      ++  +     
Sbjct: 304 IFLVGVSLAAAAAVALPLGVMAARRPRLGRITLAAAGLLQTIPSLALLVFMIPLLGLGAA 363

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +   +   IL NV  G S  P   +  A    ++ WR    + LP      
Sbjct: 364 ----PAIVALFLYSLLPILRNVATGVSGIPASIRNSAIVLGLSPWRRLLLVELPMASRAI 419

Query: 507 VTGAITACGGAWNASIVSEVASWGHI 532
           + G  TA       + +  +   G  
Sbjct: 420 LAGLETAAIINIGTATLGALIGAGGY 445


>gi|254518493|ref|ZP_05130549.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
 gi|226912242|gb|EEH97443.1| binding-protein-dependent transport system inner membrane component
           [Clostridium sp. 7_2_43FAA]
          Length = 262

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++    IT +  ++   + +++   + I +   P  S  + P+  +L A P     P+
Sbjct: 65  GTLLKHILITCYETILGFTLGTVLGAIIAIVLWASPFTSKVLDPYLVVLNALPKVALAPI 124

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V+  V     N    + ++ +  +    +  V+ G +       ++  +   T ++  +Y
Sbjct: 125 VIFWVG----NGMTAIIVIALLISIVTTIITVLTGFNEVDKGKLKLMQTLQATKFQTLKY 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ P      ++      G +W   I+ E        +   GLG  I    +      V+
Sbjct: 181 LVFPSNIQVLISALKINVGLSWVGVIMGEFL------VAREGLGFLIVYGGQISQLDMVM 234

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+      +   +
Sbjct: 235 MSIVILSVIAFVMYMIV 251



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 97/244 (39%), Gaps = 19/244 (7%)

Query: 23  LAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +A +L+  ++  +   ++      T+ P  I+D     +   +L ++   T    +    
Sbjct: 24  VAILLIFIVLWEVAARLKWIDPFLTSSPSRILDSFISFVKEGTLLKHILITCYETILGFT 83

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  +   + A +   S     VL P L ++ ++P +      + +  N     ++ A L 
Sbjct: 84  LGTVLGAIIAIVLWASPFTSKVLDPYLVVLNALPKVALAPIVIFWVGNGMTAIIVIALLI 143

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +I     + +             + +   ++ ++ + + +Q   YL  P ++  L+  + 
Sbjct: 144 SIVTTIITVLT--------GFNEVDKGKLKLMQTLQATKFQTLKYLVFPSNIQVLISALK 195

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   W  V+      +G+ ++   G+G  I    +   L  ++ +++ +  + F+   
Sbjct: 196 INVGLSWVGVI------MGEFLVAREGLGFLIVYGGQISQLDMVMMSIVILSVIAFVMYM 249

Query: 258 LLFR 261
           ++ +
Sbjct: 250 IVAK 253


>gi|254440557|ref|ZP_05054051.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198256003|gb|EDY80317.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 251

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 103/256 (40%), Gaps = 16/256 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           S  ++   F LL  + +   I  L  G+    +P   +    +  +   L + A  +   
Sbjct: 5   SHSLWRGTFALLVALAIWQAIVTLS-GVPRFILPGPALVAQALWHNAALLWENALWSAGN 63

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++  + I ++     A L A SRR   +L P+L + Q++PI        ++     P K 
Sbjct: 64  LVLGLGIGVILGIETALLLALSRRARWLLRPMLVVAQAVPIFALAPVITLWLGYGMPSK- 122

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  I     + +  +++  L  +P  L ++S       W++   L +P+++P 
Sbjct: 123 -------IVTIALVTYFPIASALFDRLMALPAGLSDLSHLSGAGRWRETLLLRLPYAVPS 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+  + +++  G   V+  E +          G+G  + ++       A+++A L +L  
Sbjct: 176 LLSGLRLAVVYGPLAVLIGEWVGSSQ------GLGHLMLMSNGRGQ-TALMFAALIVLAC 228

Query: 252 IFLYDQLLFRPMIVWS 267
           + L   L    +  W+
Sbjct: 229 LSLILWLAVEALSRWA 244



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 78/241 (32%), Gaps = 10/241 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                L        +    W  +V    +         +V    + +   +      +  
Sbjct: 3   RASHSLWRGTFALLVALAIWQAIVTLSGVPRFILPGPALVAQALWHNAALLWENALWSAG 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +V+ + I  I+ I   + +         ++P   +  A P     P++   + Y   + 
Sbjct: 63  NLVLGLGIGVILGIETALLLALSRRARWLLRPMLVVAQAVPIFALAPVITLWLGYGMPSK 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + ++L+    T + I   +     A P    +++       WR    + LP   P  ++
Sbjct: 123 IVTIALV----TYFPIASALFDRLMALPAGLSDLSHLSGAGRWRETLLLRLPYAVPSLLS 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A      A ++ E          + GLG  +  S  +G    +   ++++ C  L 
Sbjct: 179 GLRLAVVYGPLAVLIGEWVG------SSQGLGHLMLMSNGRGQTALMFAALIVLACLSLI 232

Query: 569 L 569
           L
Sbjct: 233 L 233


>gi|30022851|ref|NP_834482.1| ABC transporter permease protein [Bacillus cereus ATCC 14579]
 gi|218231133|ref|YP_002369588.1| ABC transporter, permease protein [Bacillus cereus B4264]
 gi|29898410|gb|AAP11683.1| ABC transporter permease protein [Bacillus cereus ATCC 14579]
 gi|218159090|gb|ACK59082.1| ABC transporter, permease protein [Bacillus cereus B4264]
          Length = 268

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWIARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLTKWIDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|255505454|ref|ZP_05346206.3| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Bryantella formatexigens DSM 14469]
 gi|255267718|gb|EET60923.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Bryantella formatexigens DSM 14469]
          Length = 270

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +      T+   V   ++  I+ +   I +     +S  ++P+  +L + P +   PL
Sbjct: 73  GSIFEHVGATLMETVASFVLVVIVGLFCAILLWCSDKLSEILEPYLVVLNSLPKSALAPL 132

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +        +    + IFGT    + N+  G      D  ++  +           
Sbjct: 133 LIVWLGANRTTIIVAGMSVAIFGT----ILNLYTGFREVSQDKMKLIYTLGGKRRHVLTK 188

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P  ++      G      ++ E            GLG  I   ++      V+
Sbjct: 189 VVLPSTVPATISIMKVNIGLCLVGVVIGEFIG------ARCGLGYLIIYGSQVFKLDWVL 242

Query: 557 LGVLIMCCFVLALNRFL 573
           + ++I+C   +AL   +
Sbjct: 243 MSIVILCIIAMALYALI 259



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I       +   S+ ++   T +  +++ V+ ++     A L   S +L  +L P
Sbjct: 57  SSPGRIARTFAGMVQDGSIFEHVGATLMETVASFVLVVIVGLFCAILLWCSDKLSEILEP 116

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+        ++     AIF            ++Y     + 
Sbjct: 117 YLVVLNSLPKSALAPLLIVWLGANRTTIIVAGMSVAIFG--------TILNLYTGFREVS 168

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +D  ++  +           + +P ++P  +  M +++      VV  E I         
Sbjct: 169 QDKMKLIYTLGGKRRHVLTKVVLPSTVPATISIMKVNIGLCLVGVVIGEFIG------AR 222

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  +L +++ +  +      L+
Sbjct: 223 CGLGYLIIYGSQVFKLDWVLMSIVILCIIAMALYALI 259


>gi|62289183|ref|YP_220976.1| ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|82699120|ref|YP_413694.1| ABC transporter permease [Brucella melitensis biovar Abortus 2308]
 gi|189023454|ref|YP_001934222.1| ABC transporter, permease protein [Brucella abortus S19]
 gi|225626742|ref|ZP_03784781.1| ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|237814673|ref|ZP_04593671.1| ABC transporter, permease protein [Brucella abortus str. 2308 A]
 gi|254694995|ref|ZP_05156823.1| ABC transporter, permease protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696631|ref|ZP_05158459.1| ABC transporter, permease protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254701009|ref|ZP_05162837.1| ABC transporter, permease protein [Brucella suis bv. 5 str. 513]
 gi|254707106|ref|ZP_05168934.1| ABC transporter, permease protein [Brucella pinnipedialis
           M163/99/10]
 gi|254709353|ref|ZP_05171164.1| ABC transporter, permease protein [Brucella pinnipedialis B2/94]
 gi|254731539|ref|ZP_05190117.1| ABC transporter, permease protein [Brucella abortus bv. 4 str. 292]
 gi|256030876|ref|ZP_05444490.1| ABC transporter, permease protein [Brucella pinnipedialis
           M292/94/1]
 gi|256060343|ref|ZP_05450516.1| ABC transporter, permease protein [Brucella neotomae 5K33]
 gi|256158909|ref|ZP_05456756.1| ABC transporter, permease protein [Brucella ceti M490/95/1]
 gi|256254280|ref|ZP_05459816.1| ABC transporter, permease protein [Brucella ceti B1/94]
 gi|256368672|ref|YP_003106178.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|260169778|ref|ZP_05756589.1| ABC transporter, permease protein [Brucella sp. F5/99]
 gi|260546478|ref|ZP_05822218.1| ABC transporter [Brucella abortus NCTC 8038]
 gi|260759289|ref|ZP_05871637.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260761011|ref|ZP_05873354.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|261215340|ref|ZP_05929621.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|261221435|ref|ZP_05935716.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261314579|ref|ZP_05953776.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261316865|ref|ZP_05956062.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261324322|ref|ZP_05963519.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261751534|ref|ZP_05995243.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261759323|ref|ZP_06003032.1| ABC transporter [Brucella sp. F5/99]
 gi|265987935|ref|ZP_06100492.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265997397|ref|ZP_06109954.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|62195315|gb|AAX73615.1| ABC transporter, permease protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615221|emb|CAJ10168.1| RNA-binding region RNP-1 (RNA recognition
           motif):Binding-protein-dependent transport systems inner
           membrane component [Brucella melitensis biovar Abortus
           2308]
 gi|189019026|gb|ACD71748.1| ABC transporter, permease protein [Brucella abortus S19]
 gi|225618399|gb|EEH15442.1| ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|237789510|gb|EEP63720.1| ABC transporter, permease protein [Brucella abortus str. 2308 A]
 gi|255998830|gb|ACU47229.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|260096585|gb|EEW80461.1| ABC transporter [Brucella abortus NCTC 8038]
 gi|260669607|gb|EEX56547.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260671443|gb|EEX58264.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260916947|gb|EEX83808.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260920019|gb|EEX86672.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261296088|gb|EEX99584.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261300302|gb|EEY03799.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261303605|gb|EEY07102.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261739307|gb|EEY27303.1| ABC transporter [Brucella sp. F5/99]
 gi|261741287|gb|EEY29213.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|262551865|gb|EEZ07855.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|264660132|gb|EEZ30393.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
          Length = 258

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 87/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  + LA     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLLANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|323972886|gb|EGB68084.1| inner membrane transport system [Escherichia coli TA007]
          Length = 302

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 94  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 153

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 154 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 213

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 214 ARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 266

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 267 AIDLVLLGVIPVIVLAVLTDALF 289



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 42  DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 101

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 102 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 159

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G R + +
Sbjct: 160 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGARRFLH 219

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 220 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 272

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    +  +   
Sbjct: 273 LGVIPVIVLAVLTDALF 289


>gi|238917245|ref|YP_002930762.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
 gi|238872605|gb|ACR72315.1| sulfonate/nitrate/taurine transport system permease protein
           [Eubacterium eligens ATCC 27750]
          Length = 263

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 10/206 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +              +     +T++  +V   I +I+ I   I +     +S  ++PF  
Sbjct: 54  VRLYQTFIDLSRDGVIFMHIWVTLYETLVAFAIITIVGIIFAILLWCFKGLSDCLEPFMV 113

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L + P +   P+++  +        +    + IFG    ++ N+  G      +   + 
Sbjct: 114 VLNSLPKSALAPMLIVWLGTNTKAIIITAVSVAIFG----MIINLYTGFLEIDKEKITLI 169

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +     W     +ILPG     ++      G      I+ E  +         GLG  I
Sbjct: 170 RTLGGKKWHILCKLILPGSKKIIISNMKVNIGLCLVGVIIGEFLA------AKKGLGYLI 223

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
              ++      VVLG++I+C     L
Sbjct: 224 IYGSQVFKMSYVVLGIVILCIISTLL 249



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    L A  I  +   ++A L    + L   L P + ++ S+P        +V+     
Sbjct: 76  TLYETLVAFAIITIVGIIFAILLWCFKGLSDCLEPFMVVLNSLPKSALAPMLIVWLGTNT 135

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +I A   AIF         M  ++Y     I ++   + R+     W     L +P 
Sbjct: 136 KAIIITAVSVAIFG--------MIINLYTGFLEIDKEKITLIRTLGGKKWHILCKLILPG 187

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S   ++ NM +++      V+  E +          G+G  I    +   +  ++  ++ 
Sbjct: 188 SKKIIISNMKVNIGLCLVGVIIGEFLAAKK------GLGYLIIYGSQVFKMSYVVLGIVI 241

Query: 248 MLGVIFLYDQLL 259
           +  +  L   L+
Sbjct: 242 LCIISTLLFALI 253


>gi|15966211|ref|NP_386564.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307308562|ref|ZP_07588264.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|15075481|emb|CAC47037.1| Putative uracil and uridine ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
 gi|306900962|gb|EFN31571.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 294

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 71/208 (34%), Gaps = 9/208 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +                  SL  +A  T    L    I  +   + A     +R
Sbjct: 64  VLPAPHQLIAEIWDTTANKAITSKRSLVYHAWITLSATLLGFGIGTVLGVLLAVGIVHNR 123

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L+P +   Q+IPIL      +V    +    ++   L + +  F   V  M   +
Sbjct: 124 AMDRSLMPWVIASQTIPILAIAPMIIVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGL 183

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             S   I  DL     ++  S  Q FW L  P SMP L  ++ ++++      +  E+  
Sbjct: 184 R-SPETIQLDLM---HTYNASPAQTFWKLRWPSSMPYLFTSLKVAVAISLVGAIVGEL-- 237

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                  + G+G+ +         + I 
Sbjct: 238 ---PTGAVAGLGARLLAGSYYGQTVQIW 262



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   I +++ + + + I     +   + P+       P     P++
Sbjct: 89  SLVYHAWITLSATLLGFGIGTVLGVLLAVGIVHNRAMDRSLMPWVIASQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 149 IVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGLRSPETIQLDLMHTYNASPAQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RWPSSMPYLFTSLKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 262


>gi|261839363|gb|ACX99128.1| osmoprotection protein [Helicobacter pylori 52]
          Length = 553

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L          VAI +    + +++  F +   +Y I L       V +   +  +  
Sbjct: 17  WLLHSIDVATQHLVAIALKISVVKHLIKEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEVREEVIKAAIGLGCNPKELFFKVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G LI+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFKVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|198242348|ref|YP_002216248.1| inner membrane ABC transporter permease YehY [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|197936864|gb|ACH74197.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326623998|gb|EGE30343.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 389

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLEKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLEKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|148559391|ref|YP_001258237.1| ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148370648|gb|ABQ60627.1| ABC transporter, permease protein [Brucella ovis ATCC 25840]
          Length = 258

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 75/227 (33%), Gaps = 10/227 (4%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  VV    +      +   V H    +   +      T+  V+  +++ S + I   I
Sbjct: 27  IWQAVVSIGQMPRFILPVPLDVVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAI 86

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +   P     + P      A P     P++   + Y   +  + +++LMIF   + ++ 
Sbjct: 87  GLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVS 142

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G         + A             I +P  FP   +G   A   A   ++V E 
Sbjct: 143 TFFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPALASGLSFAAVYAPIGAVVGEW 202

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    + GLG  +  +  +     +   + ++  F + L+  +
Sbjct: 203 VG------ASRGLGYLMLLANGRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPVPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +       +  V A    VVG+ V    G+G  + LA     +  +   +  +    
Sbjct: 183 ASGL------SFAAVYAPIGAVVGEWVGASRGLGYLMLLANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|317182130|dbj|BAJ59914.1| osmoprotection protein [Helicobacter pylori F57]
          Length = 518

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +   L   + +    L+PI++ + +IP L      +           
Sbjct: 29  VALSSFLVLVFGVLIGVLVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 87  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 140

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 141 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 193

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 194 SVLADKFV 201



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            +Y I L       V +   +  +  + +G+ + +     + + P    L   P+   F 
Sbjct: 15  FIYFIDLLAQHFIIVALSSFLVLVFGVLIGVLVFYNSKARAFLLPIVNFLYTIPSLALFA 74

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +     N  L L L  +      I+ +          +  + A          + 
Sbjct: 75  LFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKELFF 130

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +      P  + G   A        ++  +A  G +        A I       +   +
Sbjct: 131 RVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLL 183

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G LI+  F +  ++F+
Sbjct: 184 VAGSLIIALFSVLADKFV 201


>gi|332654300|ref|ZP_08420044.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Ruminococcaceae
           bacterium D16]
 gi|332517386|gb|EGJ46991.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Ruminococcaceae
           bacterium D16]
          Length = 209

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 80/202 (39%), Gaps = 18/202 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             +L ++   T + +    V+ +L   + + L    + L  +++PIL I  +IP + F+ 
Sbjct: 7   PKALLEHLGFTFVSVAVGFVLGVLLGILLSRL---PKNLSKLILPILSIFNTIPGVVFVG 63

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +              +  + A+     + +  + Y  L ++     E ++   +S  
Sbjct: 64  LLFLALGM--------QPVTVLIALSIYATFPILKNTYAGLSSVEGQYIEAAKGCGMSPI 115

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++P ++  + MS      + V + MI  G       G+G++I   +   D
Sbjct: 116 QCLVRVELPLALPTIIGGLRMSTVYTVSWAVLAAMIGQG-------GLGTFIYAGVSAND 168

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              IL   +    + F+   L+
Sbjct: 169 NGLILLGAVPAAILAFVLGSLV 190



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
            ++S  I P   +    P  VF   V        + P   L  L I+ T + IL N  AG
Sbjct: 40  KNLSKLILPILSIFNTIPGVVF---VGLLFLALGMQPVTVLIALSIYAT-FPILKNTYAG 95

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            S+    + E A    ++  +    + LP   P  + G   +     + ++++ +   G 
Sbjct: 96  LSSVEGQYIEAAKGCGMSPIQCLVRVELPLALPTIIGGLRMSTVYTVSWAVLAAMIGQG- 154

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLG +I           ++LG +        L   +
Sbjct: 155 ------GLGTFIYAGVSANDNGLILLGAVPAAILAFVLGSLV 190


>gi|266626102|ref|ZP_06119037.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium hathewayi DSM 13479]
 gi|288861992|gb|EFC94290.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium hathewayi DSM 13479]
          Length = 220

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 71/194 (36%), Gaps = 14/194 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  L +  + ++     A L   SR +  VL P L ++ S+P        +V+ 
Sbjct: 31  HTGVTVMETLVSFALVVVVGLATAILLWSSRSVSEVLEPYLVMLNSLPKSALAPILIVWL 90

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N             I A  +  V+    +++        D  ++  S   +       +
Sbjct: 91  GNNI--------KTIIVAAISVAVFGCIMTLHTGFMQTDPDKIKLIYSLGGTKKDVLTKV 142

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +          G+G  I    +   +  ++ 
Sbjct: 143 LLPGSVPLIISNMKVNIGLCLVGVIIGEFLAANK------GLGYLIIYGSQVFKMDLVVM 196

Query: 244 AMLTMLGVIFLYDQ 257
           +++ +  V  +  Q
Sbjct: 197 SIVILCIVSAILYQ 210



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   +V   +  ++ +   I +     +S  ++P+  +L + P +   P+
Sbjct: 26  GTIFLHTGVTVMETLVSFALVVVVGLATAILLWSSRSVSEVLEPYLVMLNSLPKSALAPI 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +        +    + +FG     +  +  G      D  ++  S   T       
Sbjct: 86  LIVWLGNNIKTIIVAAISVAVFGC----IMTLHTGFMQTDPDKIKLIYSLGGTKKDVLTK 141

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LPG  P  ++      G      I+ E  +         GLG  I   ++      VV
Sbjct: 142 VLLPGSVPLIISNMKVNIGLCLVGVIIGEFLA------ANKGLGYLIIYGSQVFKMDLVV 195

Query: 557 LGVLIMCCFVLAL 569
           + ++I+C     L
Sbjct: 196 MSIVILCIVSAIL 208


>gi|284044216|ref|YP_003394556.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948437|gb|ADB51181.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 250

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 10/184 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   ++     T+       ++ ++  I + + +      +  + P A ++   P     
Sbjct: 47  DSSTLLSATKTTLVGAFGGFVVGNVAGILLAMTVAASQTAARVVLPIALVVRVIPVIALA 106

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P +   +   +       + ++ F      L N + G  + P +  E+      +    +
Sbjct: 107 PFLTLVLGTGNATIVAISAAIVFF----PTLVNGVLGFRSVPPEMIELMEIAGASPLDVF 162

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   PY               ++++E  + G       GLG  I +S  +   P 
Sbjct: 163 LRVRIPAALPYLFAAFQIGAAACILGAMIAEWVTSGE------GLGYLILQSGVQFEVPL 216

Query: 555 VVLG 558
           +  G
Sbjct: 217 MWAG 220



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 77/232 (33%), Gaps = 15/232 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  +   + V   +  +     +  +P  +        D  +L      T +  
Sbjct: 4   KRFLPTLIAIAVVLGVWIAVKAIAQ-PSDDILPSPLQVWDAAVDDSSTLLSATKTTLVGA 62

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               V+  +   + A   A S+    V++PI  +++ IP++    F  +         V 
Sbjct: 63  FGGFVVGNVAGILLAMTVAASQTAARVVLPIALVVRVIPVIALAPFLTLVLGTGNATIVA 122

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +     F            +      ++P ++ E+      S    F  + +P ++P L
Sbjct: 123 ISAAIVFF--------PTLVNGVLGFRSVPPEMIELMEIAGASPLDVFLRVRIPAALPYL 174

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                +  +      + +E +  G+      G+G  I  +  + ++  +   
Sbjct: 175 FAAFQIGAAACILGAMIAEWVTSGE------GLGYLILQSGVQFEVPLMWAG 220


>gi|270296459|ref|ZP_06202659.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273863|gb|EFA19725.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 394

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    A   ++  + R+  +L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVAIYMSEVANSRVRNLLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++   V  + L     +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FLQQVFNLPVGESGLVGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGPHYEALFLLGVVLFFISLL 381



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++       + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVAIYMSEVANSRVRNLLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLVGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|206969919|ref|ZP_03230873.1| ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|206735607|gb|EDZ52775.1| ABC transporter, permease protein [Bacillus cereus AH1134]
          Length = 268

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKKERRRAWIARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLTKWIDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|324328685|gb|ADY23945.1| ABC transporter, permease [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 268

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  D+    W+    
Sbjct: 11  FRKQERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWDLFLNKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  WVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVV 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLNKWMDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|306842510|ref|ZP_07475161.1| ABC transporter, permease protein [Brucella sp. BO2]
 gi|306287366|gb|EFM58846.1| ABC transporter, permease protein [Brucella sp. BO2]
          Length = 228

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 18  VVHALVANAGLIAENAAATIGEVLGGLVLGSAVGIATAIGLMMSPLAQRLVMPVMVFSQA 77

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 78  IPIFALAPILTLWLGYGPAS-KIAVTVLMIF---FPVVSTFFDGMRRTETSLIDAAEILG 133

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 134 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLAN 187

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 188 GRAKVDLMFACLFVLAAFTMLLHGLV 213



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 17/216 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + + A+ T   +L  +V+        A     S     +++P++   Q+IPI    
Sbjct: 25  NAGLIAENAAATIGEVLGGLVLGSAVGIATAIGLMMSPLAQRLVMPVMVFSQAIPIFALA 84

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               ++       K+    L   F + ++         +  +      L + +       
Sbjct: 85  PILTLWLGYGPASKIAVTVLMIFFPVVST--------FFDGMRRTETSLIDAAEILGAGR 136

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + +P + P L   + ++       V A    VVG+ V    G+G  + LA    
Sbjct: 137 MAILFRIRIPSAFPALASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLLANGRA 190

Query: 237 DLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269
            +  +   +  +     L   L+    R +  W  K
Sbjct: 191 KVDLMFACLFVLAAFTMLLHGLVSHFARKLAAWPKK 226


>gi|259416544|ref|ZP_05740464.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259347983|gb|EEW59760.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 305

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 79/220 (35%), Gaps = 9/220 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A   V  +    L    +         ++       SL  +A  T    L    I    
Sbjct: 63  VAIPRVWSVERPRLPAPHQVATELWDTTVMKKITSKRSLIYHAQVTLSATLMGFAIGTGL 122

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A     SR + M ++P   + Q+IPI+      +V   ++    ++   + A +  
Sbjct: 123 GILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGLLPKAIIAAYLS 182

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +   M + L +      ++ +++  S  Q FW L +P SMP L  ++ + ++ 
Sbjct: 183 F----FPVVVGMVKGLRSPDHMQLDLMKTYFASQGQVFWKLRLPSSMPYLFASLKIGIAA 238

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                +  E+         + G+G+ +         + I 
Sbjct: 239 SLVGAIVGEL-----PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   +T+   ++   I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHAQVTLSATLMGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +  +   ++  ++  +  + +  +
Sbjct: 160 IVVLYSIGVQGLLPKAIIAAYLSFFPVVVGMVKGLRSPDHMQLDLMKTYFASQGQVFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|256384079|gb|ACU78649.1| phosphate ABC transport system, permease component [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|256384911|gb|ACU79480.1| phosphate ABC transport system, permease component [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|296455600|gb|ADH21835.1| phosphate ABC transport system, permease component [synthetic
           Mycoplasma mycoides JCVI-syn1.0]
          Length = 696

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 80/597 (13%), Positives = 192/597 (32%), Gaps = 77/597 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF LLA V+++G + I  + +       + V     + D     +      T + +  +M
Sbjct: 35  IFVLLALVILLGFVMIKTNVLFNKQSFFEFVFGKNWSPDSKQFGILTITLMTLILIFISM 94

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    V + I+ ++  IP + F  F    +     L     
Sbjct: 95  LIAVPLTIFTSFFISEYLTLKSQKVTITIIKLLAGIPSVVFGLFAREQIGALFKLMGASS 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 155 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPFIYRDASLALGISKEKTTFNIIRKSATPK 214

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ M+      +A  MI        DT   + G            IG  +     
Sbjct: 215 IISAVILGMARVIGETMAIMMIAGNSTAWFDTNNGVSGFLFSSIRTLSSTIGLEMLENSS 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+            +     I      VL+  +KT+ 
Sbjct: 275 SLHESALYAIGMFLFILVFIINLLIL----------FVSNKNSISKKIHLVLFKNKKTHK 324

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           ++ +          +  N                         +  S ++ +  +  +  
Sbjct: 325 IKHVKLYQKQTLDQIITN-----------------RTENKLFKKIYSTIMLVLMWLSISF 367

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408
           V +   W     I N  +                    +   ++LI+   +  IP+ +  
Sbjct: 368 VIMFTFWIVFTTIFNGLSSLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFAIPLALAC 427

Query: 409 GF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFG 459
                       + +   +    L A+ P+ +F    +S    Y  L  +++ + + +  
Sbjct: 428 AIYLSEFANKNSYFAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASITMTI 487

Query: 460 TQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG--- 515
               +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A     
Sbjct: 488 VVLPMLIKNFEDALTSVPLSYREAAIALGLSKTKTLFKIVLPNALQAIITGTILAMARII 547

Query: 516 --GAWNASIVSEVASWGHIHLRTTGLG-----AYIAESTEKGSFPEVVLGVLIMCCF 565
              A     +     +      ++G         IA  +  G   ++   + ++   
Sbjct: 548 GESAPIYLTLGTAIKYPDRGFLSSGSTLTTGIYKIASESAPGQGNDIAWLMSLITII 604


>gi|90423438|ref|YP_531808.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90105452|gb|ABD87489.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 275

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 98/257 (38%), Gaps = 20/257 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA------SRTTLRMLS 74
           DL+   L + ++      I   + P  +  +    L +  + + A      + T    L 
Sbjct: 9   DLMWGALGVALLAGGWSWINRASGPFVLPSLGDTGLALVRIIRSADTLPTVAATLEHALG 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + I     F+       +R +G  + PI   +  +P + ++   +++F     G +   
Sbjct: 69  GVAIGAGIGFMVGLAGGFARPIGATIAPIATAILGVPPIAWVVLALLWFGPGGLGPLFTV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + A+  +F + +        Q + +    L E++R FRL    + + + +P     L  
Sbjct: 129 AITAMPIVFAASL--------QGVRSRDPQLAEMARVFRLPMRSRLFRIMLPELATILAP 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  + +  W   + +E++  G       GIG   A A    DL   +  ++ ++  + +
Sbjct: 181 ALATTFAMAWKVALMAEVLGDGS------GIGGRFATARAHLDLPEAMAWIVIVVSFVLI 234

Query: 255 YDQLLFRPMIVWSNKFR 271
            D LL   +  W  + R
Sbjct: 235 SDVLLLGRLRRWVGRCR 251



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 24/259 (9%)

Query: 338 QRVSYMLDIFWFCV-VCGVAIGIAWQSIG---YIVNHFTYQDVLYV--------IWLGCI 385
           +R     D+ W  + V  +A G +W +     +++       +  V        +     
Sbjct: 2   RRGEGASDLMWGALGVALLAGGWSWINRASGPFVLPSLGDTGLALVRIIRSADTLPTVAA 61

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +  + I + I   VG+  GF   I + I P A  +   P   +  L +       
Sbjct: 62  TLEHALGGVAIGAGIGFMVGLAGGFARPIGATIAPIATAILGVPPIAWVVLALLWFGPGG 121

Query: 446 LNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L P   +++  +      I+F   + G  +      E+A  F +        I+LP +  
Sbjct: 122 LGPLFTVAITAM-----PIVFAASLQGVRSRDPQLAEMARVFRLPMRSRLFRIMLPELAT 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                  T    AW  ++++EV   G      +G+G   A +      PE +  ++I+  
Sbjct: 177 ILAPALATTFAMAWKVALMAEVLGDG------SGIGGRFATARAHLDLPEAMAWIVIVVS 230

Query: 565 FVLALNRFLWHPLYLYGTR 583
           FVL  +  L   L  +  R
Sbjct: 231 FVLISDVLLLGRLRRWVGR 249


>gi|197250961|ref|YP_002146551.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197214664|gb|ACH52061.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 215

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISSS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 SSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|225181815|ref|ZP_03735252.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
 gi|225167488|gb|EEG76302.1| binding-protein-dependent transport systems inner membrane
           component [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A      +L A  IS+L   +       +R    +++ +  ++  IP    L F + +F 
Sbjct: 18  AIEHFYLVLLAGAISILIGVILGVAITYNRVAARIVLGVCQVLMVIPSFAMLGFLLPFFG 77

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +           + A+    +  +T + Y  +  IP  + E ++   +S +   W + 
Sbjct: 78  IGFR--------TGVVALILYCLLPVTQNTYIGILEIPPSVLESAKGMGMSPFAILWKVK 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++     +M         +  I  G        +G  I   I       IL  
Sbjct: 130 IPLALPVIIAGFRTAMIMIVGIAAIAAFIGAGG-------LGEMIFQGISRSQANRILTG 182

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  +  + D L+ R
Sbjct: 183 AIFIAIIALMLDVLMSR 199



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 12/200 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            + V++   I+ +I + +G+ I +    +  +    Q+L   P+      ++        
Sbjct: 22  FYLVLLAGAISILIGVILGVAITYNRVAARIVLGVCQVLMVIPSFAMLGFLLPFFGIGFR 81

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      +  N   G    P    E A    ++ +     + +P   P  
Sbjct: 82  TGVVALILYCLL----PVTQNTYIGILEIPPSVLESAKGMGMSPFAILWKVKIPLALPVI 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + ++     G        LG  I +   +     ++ G + +    
Sbjct: 138 IAGFRTAMIMIVGIAAIAAFIGAGG-------LGEMIFQGISRSQANRILTGAIFIAIIA 190

Query: 567 LALNRFLWHPLYLYGTRCLR 586
           L L+  +   L  Y    +R
Sbjct: 191 LMLDVLM-SRLEEYLMARVR 209


>gi|188527337|ref|YP_001910024.1| osmoprotection protein (proWX) [Helicobacter pylori Shi470]
 gi|188143577|gb|ACD47994.1| osmoprotection protein (proWX) [Helicobacter pylori Shi470]
          Length = 553

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y + L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAIVLKISVVKHLIQEF-HDRFIYFVDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADQFV 236


>gi|23336016|ref|ZP_00121245.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Bifidobacterium longum DJO10A]
 gi|189438985|ref|YP_001954066.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Bifidobacterium longum DJO10A]
 gi|239620817|ref|ZP_04663848.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|189427420|gb|ACD97568.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           component [Bifidobacterium longum DJO10A]
 gi|239516393|gb|EEQ56260.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 260

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  ++  + V      L H           +    I    ++L   A+ T    
Sbjct: 8   KRRMPTVIAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIET-WNTLGPAAAITGYEG 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   + ++ F  +       S        P+L   Q++P++      +++F     GK  
Sbjct: 67  VVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGK-- 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 125 ------IVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQI 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
              + +S +  +     +E +          G+G ++  A        I  A + ++ +
Sbjct: 179 YGGIRVSAAYIFATASTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATIVIILM 231



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  +A+   W  +G++              T +    +     IT +  VV  + A 
Sbjct: 15  IAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAV 74

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++   P        P     PL +    +      + +++  +F
Sbjct: 75  FFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 135 ----PIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYGGIRVSAAYIF 190

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    +++      L
Sbjct: 191 ATASTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATIVIILMTCVL 235


>gi|257437832|ref|ZP_05613587.1| ABC transporter, permease protein, cysTW family [Faecalibacterium
           prausnitzii A2-165]
 gi|257199755|gb|EEU98039.1| ABC transporter, permease protein, cysTW family [Faecalibacterium
           prausnitzii A2-165]
          Length = 258

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 87/252 (34%), Gaps = 23/252 (9%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--------WQSIGYIVNHFTYQDVLYVIWL 382
             Q    +       +FW  V    A+ I          Q+ G ++      D    +  
Sbjct: 1   MKQTKKRRAGLLAAAVFWLAVWQAAAMAIGQEVFLVSPIQAAGTLMELLPQADFWQRVG- 59

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              +   +++   +  ++ + +         + + + P  QL+ A P   F  L +  VS
Sbjct: 60  --FSAGHILLGFALGVVVSVLLAAAAERWAWVDTLLAPVIQLVKATPVASFIILALVWVS 117

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               + ++ +S LM+      +L++ V  G  +      E+A  FH+   R  + I LP 
Sbjct: 118 --GRSLSILISFLMVL----PVLYSAVRTGIESADVQLLEMAQVFHLPLARRVKAIWLPA 171

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I P +  G   A G  W + + +EV            +G  +  +    S  E+     +
Sbjct: 172 ILPAFRQGCSVALGICWKSGVAAEVIGLPDGS-----IGDALYRAKITLSTGELFAWTFV 226

Query: 562 MCCFVLALNRFL 573
           +        +  
Sbjct: 227 IILLSAGFEKLF 238



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 72/196 (36%), Gaps = 9/196 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + V     + +        P      +   L      Q    +   +L    + ++ + +
Sbjct: 19  LAVWQAAAMAIGQEVFLVSPIQAAGTLMELLPQADFWQRVGFSAGHILLGFALGVVVSVL 78

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A  A +   +  +L P++ ++++ P+  F+   +V+               +I   F  
Sbjct: 79  LAAAAERWAWVDTLLAPVIQLVKATPVASFIILALVWVSGR---------SLSILISFLM 129

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  ++   + +    L E+++ F L   ++   + +P  +P       +++   W 
Sbjct: 130 VLPVLYSAVRTGIESADVQLLEMAQVFHLPLARRVKAIWLPAILPAFRQGCSVALGICWK 189

Query: 206 FVVASEMIVVGDTVIP 221
             VA+E+I + D  I 
Sbjct: 190 SGVAAEVIGLPDGSIG 205


>gi|227546841|ref|ZP_03976890.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|227212803|gb|EEI80684.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
          Length = 260

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  ++  + V      L H           +    I    ++L   A+ T    
Sbjct: 8   KRRMPTVIAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIET-WNTLGPAAAITGYEG 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   + ++ F  +       S        P+L   Q++P++      +++F     GK  
Sbjct: 67  VVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGK-- 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 125 ------IVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQI 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
              + +S +  +     +E +          G+G ++  A        I  A + ++ +
Sbjct: 179 YGGIRVSAAYIFATASTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATIVIILM 231



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  +A+   W  +G++              T +    +     IT +  VV  + A 
Sbjct: 15  IAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAV 74

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++   P        P     PL +    +      + +++  +F
Sbjct: 75  FFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 135 ----PIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYGGIRVSAAYIF 190

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    +++      L
Sbjct: 191 ATASTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATIVIILMTCVL 235


>gi|153812259|ref|ZP_01964927.1| hypothetical protein RUMOBE_02658 [Ruminococcus obeum ATCC 29174]
 gi|149831666|gb|EDM86753.1| hypothetical protein RUMOBE_02658 [Ruminococcus obeum ATCC 29174]
          Length = 264

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 10/199 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           FT      +     IT+   +V  +    + I   + +   P +S  ++P+  +L + P 
Sbjct: 62  FTMIQDQSLFTHIGITLTETLVSFVFTVFLGIGTAVLLWCCPKLSRILEPYLVVLNSLPK 121

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   PL++  +        +    + IFG+    + N+  G      +  ++  +   T 
Sbjct: 122 SALAPLLIVWLGANIRTIIVAGMSVAIFGS----IINLYTGFREADPEKLKLIRTLGGTK 177

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                 I+LP   P  ++      G      I+ E            GLG  I   ++  
Sbjct: 178 KDELTKIVLPSSVPLILSVMKVNIGLCLVGVIIGEFIGARQ------GLGYLIIYGSQTF 231

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               V++ ++I+C   + L
Sbjct: 232 KLTWVLMSIVILCVIAMGL 250



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P +I       +   SL  +   T    L + V ++      A L     +L  +L P
Sbjct: 52  SSPSEIWQTFFTMIQDQSLFTHIGITLTETLVSFVFTVFLGIGTAVLLWCCPKLSRILEP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+        ++     AIF            ++Y       
Sbjct: 112 YLVVLNSLPKSALAPLLIVWLGANIRTIIVAGMSVAIFGSI--------INLYTGFREAD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ R+   +   +   + +P S+P ++  M +++      V+  E I         
Sbjct: 164 PEKLKLIRTLGGTKKDELTKIVLPSSVPLILSVMKVNIGLCLVGVIIGEFIG------AR 217

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   L  +L +++ +  +      +L
Sbjct: 218 QGLGYLIIYGSQTFKLTWVLMSIVILCVIAMGLYAIL 254


>gi|313114471|ref|ZP_07799987.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623200|gb|EFQ06639.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 255

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 23/236 (9%)

Query: 347 FWFCVVCGVAIGIA--------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           FW  V    A+ +          Q++  ++      +    +     +  R+++   +  
Sbjct: 16  FWLAVWQCAAMAVGQEVFLVSPVQAVRTLLQLLPQAEFWQRVG---FSSGRILLGFGLGV 72

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            + I + +           + P  QL+ A P   F  L +  V     + ++ +S LM+ 
Sbjct: 73  AVSIVLAVAAQAWHTADVLLAPVLQLVKATPVASFIILALVWVR--GASLSVLISFLMVL 130

Query: 459 GTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                +L+  V  G  +      E+   F +   R  R + LP + P +  G   A G  
Sbjct: 131 ----PVLYGAVRTGIQSADPQLLEMTKVFRLPLGRRLRAVWLPAVLPAFRQGCSVALGIC 186

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           W + + +EV    +       +G  +  +    S  E+     ++        +  
Sbjct: 187 WKSGVAAEVIGLPNGS-----IGDALYRAKITLSTGELFAWTFVIILLSAGFEKLF 237



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 9/196 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + V     + +        P   V  +   L      Q    ++ R+L    + +  + V
Sbjct: 18  LAVWQCAAMAVGQEVFLVSPVQAVRTLLQLLPQAEFWQRVGFSSGRILLGFGLGVAVSIV 77

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A  A       ++L P+L ++++ P+  F+   +V+               ++   F  
Sbjct: 78  LAVAAQAWHTADVLLAPVLQLVKATPVASFIILALVWVRG---------ASLSVLISFLM 128

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  ++   + +    L E+++ FRL   ++   + +P  +P       +++   W 
Sbjct: 129 VLPVLYGAVRTGIQSADPQLLEMTKVFRLPLGRRLRAVWLPAVLPAFRQGCSVALGICWK 188

Query: 206 FVVASEMIVVGDTVIP 221
             VA+E+I + +  I 
Sbjct: 189 SGVAAEVIGLPNGSIG 204


>gi|323528816|ref|YP_004230968.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323385818|gb|ADX57908.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 271

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+ + +  ++ I + V I  G  P +++ + PF  +++  P     P++        
Sbjct: 78  SVRRLAIGLAASAAIALAVSIATGSIPAVTAALSPFITVMSMIPPLALLPILFIVFGLDE 137

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      +L+I G    ++ ++   A   PN+    A +   T W     +I+P + P 
Sbjct: 138 LSK----VVLIIIGITPMMIRDLQQRARDIPNERWVKAQTLGATSWTLILRMIVPQLLPR 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +     +   AW   I +E  +       T GLG  I       +   ++  VL +   
Sbjct: 194 LLVALRLSLCSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVLWITLL 247

Query: 566 VLALNRFLWHPLYLYG 581
              ++  L   L  Y 
Sbjct: 248 AWLMDEAL-RRLTKYA 262



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+   +  S       +        +   L P + +M  IP L  L    
Sbjct: 71  LWTDTRSSVRRLAIGLAASAAIALAVSIATGSIPAVTAALSPFITVMSMIPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       M   + Q   +IP +    +++   + W   
Sbjct: 131 IVFGLD--------ELSKVVLIIIGITPMMIRDLQQRARDIPNERWVKAQTLGATSWTLI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP  +P L+  + +S+   W F++A+E I   D      G+G  I L  +   +  
Sbjct: 183 LRMIVPQLLPRLLVALRLSLCSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  +L +  + +L D+ L R
Sbjct: 237 ILPYVLWITLLAWLMDEALRR 257


>gi|254690506|ref|ZP_05153760.1| ABC transporter, permease protein [Brucella abortus bv. 6 str. 870]
 gi|256258763|ref|ZP_05464299.1| ABC transporter, permease protein [Brucella abortus bv. 9 str. C68]
 gi|260756065|ref|ZP_05868413.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260885087|ref|ZP_05896701.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|297247597|ref|ZP_06931315.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|260676173|gb|EEX62994.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260874615|gb|EEX81684.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|297174766|gb|EFH34113.1| sulfonate/nitrate/taurine transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 258

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWV------CASRGLGYLMLLAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 87/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  + LA     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVCASRGLGYLMLLANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|307323854|ref|ZP_07603063.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306890303|gb|EFN21280.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 290

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 13/198 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  ++   I  +  + +GI  G    ++  + P+ ++L A P  V  P+ +       
Sbjct: 94  TLYEALLGWGIGVVAGVVLGIAFGRVAFLADVLGPYIKVLNALPRIVLAPIFLIWFGLGP 153

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    +     +  +    +++P    +
Sbjct: 154 ASKVASAVVLVFFPVF----FNAFQGAREVDRNLVANSRILGASNRQVTLQVVIPSATSW 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T    + G A   +IV E          T GLG  ++ S    +   V   + I+   
Sbjct: 210 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSSSQGTFNAAGVYAAMAILAVV 263

Query: 566 VLA---LNRFLWHPLYLY 580
            L    L  FL   L+ +
Sbjct: 264 ALLAEGLLTFLEKRLFRW 281



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL +    T    L    I ++   V      +   L  VL P + ++ ++P + 
Sbjct: 81  GTAQGSLWEQIWYTLYEALLGWGIGVVAGVVLGIAFGRVAFLADVLGPYIKVLNALPRIV 140

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +++F      KV  A +   F +         F+ +Q    + R+L   SR    
Sbjct: 141 LAPIFLIWFGLGPASKVASAVVLVFFPV--------FFNAFQGAREVDRNLVANSRILGA 192

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q    + +P +   +  ++ +S        +  E I          G+G  ++ +  
Sbjct: 193 SNRQVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSSSQG 246

Query: 235 EQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +   +  AM  +  V  L       L + +  W
Sbjct: 247 TFNAAGVYAAMAILAVVALLAEGLLTFLEKRLFRW 281


>gi|330836406|ref|YP_004411047.1| phosphate ABC transporter, inner membrane subunit PstA [Spirochaeta
           coccoides DSM 17374]
 gi|329748309|gb|AEC01665.1| phosphate ABC transporter, inner membrane subunit PstA [Spirochaeta
           coccoides DSM 17374]
          Length = 525

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 78/198 (39%), Gaps = 17/198 (8%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
               + ++ L        AA       K  RL  ++   +D++ SIP + F  F ++ F+
Sbjct: 311 TFLMVFLTTLIAAPLGIAAAVYLVEYAKKGRLTSIIRSGIDVLASIPSIIFGLFGLLVFV 370

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       + ++    +    +  +  +  +++ ++ + L E S     +  +  W + 
Sbjct: 371 QLLGWSF--SLISGTLTVALMILPTIIRTSEEAIRSVEQRLREASIGMGATKMETIWRVV 428

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-------YIALAIKEQD 237
           +P ++ G+   ++++M        A+ +  +G +     G+ S       +I L I E  
Sbjct: 429 LPSALNGITTGIILAMGRA-IGETAALLYTIGSSTAVATGLSSGSRVLALHIMLTINEGQ 487

Query: 238 LLAILYAMLTMLGVIFLY 255
                +A   +L V+ L 
Sbjct: 488 SFDKAFASAFVLIVVVLI 505



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 18/197 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCV 441
            +++ + ++I  P+GI              ++S I+    +LA+ P+ +F  F L+V   
Sbjct: 312 FLMVFLTTLIAAPLGIAAAVYLVEYAKKGRLTSIIRSGIDVLASIPSIIFGLFGLLVFVQ 371

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   +  +L +       I+        +     +E +     T       ++LP 
Sbjct: 372 LLGWSFSLISGTLTVALMILPTIIRTSEEAIRSVEQRLREASIGMGATKMETIWRVVLPS 431

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA-------YIAESTEKGS-FP 553
                 TG I A G A      + + + G      TGL +       +I  +  +G  F 
Sbjct: 432 ALNGITTGIILAMGRA-IGETAALLYTIGSSTAVATGLSSGSRVLALHIMLTINEGQSFD 490

Query: 554 EVVLGVLIMCCFVLALN 570
           +      ++   VL +N
Sbjct: 491 KAFASAFVLIVVVLIIN 507


>gi|168466160|ref|ZP_02700030.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|195631504|gb|EDX50064.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
          Length = 389

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKHFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY---- 444
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKHF 246

Query: 445 --------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|126727116|ref|ZP_01742953.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126703544|gb|EBA02640.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 310

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 9/202 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L   V+  L   + A     SR +   ++P   + Q+IPIL  
Sbjct: 100 TSKRSLVYHGWVTLAPTLLGFVMGTLLGIMLAVGIVYSRVMDKSVMPWAIVSQTIPILAL 159

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V         V+   + A +  F    + +   M + L +      ++ R++  +
Sbjct: 160 APMIIVVLGAAGIHGVLPKSIIAAYLSF----FPVVVGMVKGLRSPDAMQLDLLRTYNTN 215

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-----GSYIA 230
             Q FW L +P S P L  ++ + +S      + +E+            +     G  I 
Sbjct: 216 NSQGFWKLRLPSSTPYLFASLKIGISASLIGTIVAELPTGAKAGFGARMLVGDQYGQPIL 275

Query: 231 LAIKEQDLLAILYAMLTMLGVI 252
                         ++ ++ +I
Sbjct: 276 SWAALFAAAITAATLVGIIALI 297



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 72/174 (41%), Gaps = 5/174 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++  ++ +++ I + + I +   +   + P+A +    P     P++
Sbjct: 104 SLVYHGWVTLAPTLLGFVMGTLLGIMLAVGIVYSRVMDKSVMPWAIVSQTIPILALAPMI 163

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    ++  L  S++  + + + ++  ++ G  +      ++  +++    + +  +
Sbjct: 164 IVVLGAAGIHGVLPKSIIAAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYNTNNSQGFWKL 223

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            LP   PY           +   +IV+E+ +         G GA +    + G 
Sbjct: 224 RLPSSTPYLFASLKIGISASLIGTIVAELPTGAK-----AGFGARMLVGDQYGQ 272


>gi|42783983|ref|NP_981230.1| ABC transporter, permease protein [Bacillus cereus ATCC 10987]
 gi|42739913|gb|AAS43838.1| ABC transporter, permease protein [Bacillus cereus ATCC 10987]
          Length = 268

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-- 384
           F +   +     R   +L +  F  +  +A    W       +  +  ++    W+    
Sbjct: 11  FRKKERRRAWLARSLQLLLLILFFALWEIASKKEWIDPLLFSSPSSIWELFLSKWMDGSL 70

Query: 385 -----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                 T+    +  I+ +++   +  ++ + P ++  + P+  +L A P     P+++ 
Sbjct: 71  LVHIWTTLLETGLGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPIIIV 130

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                   PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ +I
Sbjct: 131 IFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVI 185

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 186 LPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I ++        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWELFLSKWMDGSLLVHIWTTLLETGLGFILGTVLGAIIATFLWWLPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVILPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|323692910|ref|ZP_08107134.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           [Clostridium symbiosum WAL-14673]
 gi|323503031|gb|EGB18869.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           [Clostridium symbiosum WAL-14673]
          Length = 264

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 72/194 (37%), Gaps = 14/194 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  L +  + +    + A L   S+ L  +L P L ++ S+P        +V+ 
Sbjct: 74  HTGVTIMETLVSFFLVVTIGLLGAILLWSSKSLSDILEPYLVMLNSLPKSALAPILIVWL 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N     ++ A   A+F    +        ++    +   D  ++  S           +
Sbjct: 134 GNNIKTIIVAAVSVAVFGAIMT--------LHNGFSHTDPDQIKLIYSLGGKRKDVLTKV 185

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +          G+G  I    +   +  ++ 
Sbjct: 186 LLPGSIPLIISNMKVNVGLCLVGVIIGEFLAANK------GLGYLIIYGSQVFKMDMVVM 239

Query: 244 AMLTMLGVIFLYDQ 257
           +++ +  V  +  Q
Sbjct: 240 SIVILCIVSAVLYQ 253



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 12/194 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   +V   +   I +   I +     +S  ++P+  +L + P +   P+
Sbjct: 69  GSIFLHTGVTIMETLVSFFLVVTIGLLGAILLWSSKSLSDILEPYLVMLNSLPKSALAPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWR 495
           ++  +        +    + +FG         +  G S    D  ++  S          
Sbjct: 129 LIVWLGNNIKTIIVAAVSVAVFGA-----IMTLHNGFSHTDPDQIKLIYSLGGKRKDVLT 183

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LPG  P  ++      G      I+ E  +         GLG  I   ++      V
Sbjct: 184 KVLLPGSIPLIISNMKVNVGLCLVGVIIGEFLA------ANKGLGYLIIYGSQVFKMDMV 237

Query: 556 VLGVLIMCCFVLAL 569
           V+ ++I+C     L
Sbjct: 238 VMSIVILCIVSAVL 251


>gi|298488811|ref|ZP_07006838.1| Glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156652|gb|EFH97745.1| Glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 217

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 79/204 (38%), Gaps = 10/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D   +    ++    +  A+ +++L       L  +   L   L     ++ ++P +  
Sbjct: 10  IDWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   ++
Sbjct: 70  FGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I  
Sbjct: 127 FGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISR 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            ++  ++   + +  +  + D LL
Sbjct: 180 SNMSMLIVGAVLVSILAIIADLLL 203



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 8/200 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   V+ L    +  V + + +A ++ +P+G+ +   P ++  +Q  A +L   P+   F
Sbjct: 11  DWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIALF 70

Query: 435 PLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++   S +        ++  +   +   I+ N     +      +E A    +T  + 
Sbjct: 71  GLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMTFGQR 130

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  TA         ++     G       GLG  I  S  + +  
Sbjct: 131 LRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISRSNMS 183

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G +++    +  +  L
Sbjct: 184 MLIVGAVLVSILAIIADLLL 203


>gi|303254860|ref|ZP_07340945.1| ABC transporter, permease protein [Streptococcus pneumoniae BS455]
 gi|302598131|gb|EFL65192.1| ABC transporter, permease protein [Streptococcus pneumoniae BS455]
          Length = 252

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 9   RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 80  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 136 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 196 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|296330402|ref|ZP_06872883.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675993|ref|YP_003867665.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152670|gb|EFG93538.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414237|gb|ADM39356.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           (permease) [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 224

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 76/205 (37%), Gaps = 15/205 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   + Q   R  L  +  ++ + +       L A+ R L   +  + +++Q+IP L 
Sbjct: 12  SQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRTLSGWIFAVTNVIQTIPALA 71

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 I ++F   +  +  + Y  + +I     E  ++  +
Sbjct: 72  MLAVLMLVMGLG--------ANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGM 123

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + +Q    + +P ++  ++  +  +       +V +  I    T +   G+G  I     
Sbjct: 124 TKFQVLRMVELPLALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSN 176

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             +  AI+ A      ++ +   L+
Sbjct: 177 ATNGTAIILAGAIPTALMAVIADLV 201



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  +  Q+  YV+          V  ++ A+I+ IP+GI I     +S  I     ++  
Sbjct: 7   LGTYYSQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARYRTLSGWIFAVTNVIQT 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA     +++  +          + L +   +   I+ N   G  +  + + E   +  
Sbjct: 67  IPALAMLAVLMLVMGLGANT----VILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMG 122

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T ++  R + LP      + G  TA   A   + +      G       GLG  I   +
Sbjct: 123 MTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAG-------GLGDIIVRGS 175

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   ++L   I    +  +   +
Sbjct: 176 NATNGTAIILAGAIPTALMAVIADLV 201


>gi|13476584|ref|NP_108154.1| ABC transporter, permease [Mesorhizobium loti MAFF303099]
 gi|14027346|dbj|BAB53615.1| ABC transporter, permease [Mesorhizobium loti MAFF303099]
          Length = 292

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +TM   V+  +  S+  I +G+ +G     +     + +++ + P  V  P+ +  +  
Sbjct: 94  YVTMEEAVIGFVTGSVAGIIIGVALGRNRMAADIFSIYIKVVNSIPRVVLAPIFIMILGL 153

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +      +++ F        N   G           A     + W+  R +I+P   
Sbjct: 154 GLASKVALAFVMVFFVVF----HNAFQGVREADRAMIANARILGASNWQLTRSVIVPSAM 209

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            +       + G A   +IV E            G+G  I  +        +   ++I+ 
Sbjct: 210 SWIFASLHVSFGFAIIGAIVGEFVG------SRYGIGLLINIAKGSFDAAGMYAAIVIVM 263

Query: 564 CFVLALNRFL 573
              L     +
Sbjct: 264 VVALGAEYLM 273



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 80/240 (33%), Gaps = 16/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRD--IVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            L    +   +  +              + +          L  +   T    +   V  
Sbjct: 48  FLGLWEIAARLAWIDPFFYAMPSAISQRLYEWTTEGTSEGPLWYHLYVTMEEAVIGFVTG 107

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +   +      ++R    +    + ++ SIP +      ++        KV  A +   
Sbjct: 108 SVAGIIIGVALGRNRMAADIFSIYIKVVNSIPRVVLAPIFIMILGLGLASKVALAFVMVF 167

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +F         + +Q +    R +   +R    S WQ    + VP +M  +  ++ +S
Sbjct: 168 FVVFH--------NAFQGVREADRAMIANARILGASNWQLTRSVIVPSAMSWIFASLHVS 219

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                F ++ +   +VG+ V    GIG  I +A    D   +  A++ ++ V    + L+
Sbjct: 220 FG---FAIIGA---IVGEFVGSRYGIGLLINIAKGSFDAAGMYAAIVIVMVVALGAEYLM 273


>gi|284043106|ref|YP_003393446.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283947327|gb|ADB50071.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 259

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 88/256 (34%), Gaps = 18/256 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
             P +  + A V    +       +    +P        +  D   L      T   +L 
Sbjct: 10  FLPAVLIVAALVGAWQLYATHG-NVDSLLLPSPTEVADALWTDRALLWDNFKVTAGEVLL 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +     A     S  L   + P+L   Q++PI    +  VV+       K++  
Sbjct: 69  GILVAAVAGLACAVAIHLSPTLRRAVYPLLVASQTVPIPIVASLLVVWLGFDLAPKLVII 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L + F         +  +   +L  +  +L  + R+   S  + F ++  P ++PGL  
Sbjct: 129 GLVSFF--------PIAVTTLDALAGVDPELRRLMRTLDASRLRTFRHVEAPAALPGLFS 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              ++++      V +E            G+G  I  A+ +        A+L +      
Sbjct: 181 GAKVAVAVAVIGAVFAE------QSGSDAGLGRLIQQAVPQLLTARAYAAVLILSAFAIA 234

Query: 255 ---YDQLLFRPMIVWS 267
                 L+ R ++ W+
Sbjct: 235 LFGLLALVERRVLPWA 250



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 86/247 (34%), Gaps = 23/247 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGY-------------IVNHFTYQDVLYVIWLGCIT 386
            +     F   V+   A+  AWQ                  V    + D   +     +T
Sbjct: 3   RARTAVGFLPAVLIVAALVGAWQLYATHGNVDSLLLPSPTEVADALWTDRALLWDNFKVT 62

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
              V++ I++A++  +   + I   P +   + P        P  +   L+V  +  + L
Sbjct: 63  AGEVLLGILVAAVAGLACAVAIHLSPTLRRAVYPLLVASQTVPIPIVASLLVVWLG-FDL 121

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L +  L+   + + I    +   +    + + +  +   +  R +R++  P   P  
Sbjct: 122 APKLVIIGLV---SFFPIAVTTLDALAGVDPELRRLMRTLDASRLRTFRHVEAPAALPGL 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            +GA  A   A   ++ +E            GLG  I ++  +         VLI+  F 
Sbjct: 179 FSGAKVAVAVAVIGAVFAE------QSGSDAGLGRLIQQAVPQLLTARAYAAVLILSAFA 232

Query: 567 LALNRFL 573
           +AL   L
Sbjct: 233 IALFGLL 239


>gi|333001263|gb|EGK20831.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri VA-6]
          Length = 223

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 15  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 74

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 75  ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 134

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 135 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 187

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 188 AIDLVLLGVIPVIVLAVLTDALF 210



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++    
Sbjct: 19  LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVT 78

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+ G +  P D  E A +  ++G + +
Sbjct: 79  AFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRF 138

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ LP   P ++             ++++ +   G       G GA + +     +   
Sbjct: 139 LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDL 191

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    +  +   
Sbjct: 192 VLLGVIPVIVLAVLTDALF 210


>gi|289167579|ref|YP_003445848.1| ABC transporter, permease-phosphate transport [Streptococcus mitis
           B6]
 gi|307709070|ref|ZP_07645529.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           mitis SK564]
 gi|322376226|ref|ZP_08050719.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M334]
 gi|288907146|emb|CBJ21980.1| ABC transporter, permease-phosphate transport [Streptococcus mitis
           B6]
 gi|307620016|gb|EFN99133.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           mitis SK564]
 gi|321282033|gb|EFX59040.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           M334]
          Length = 305

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 243



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 244


>gi|229541808|ref|ZP_04430868.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
 gi|229326228|gb|EEN91903.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coagulans 36D1]
          Length = 225

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 74/193 (38%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ R+L   ++ + +I+Q++P L  L+  ++     
Sbjct: 24  RHFLMSAYGVLFAAVVAIPLGIFMARRRKLSAWILTLANIIQTVPSLAMLSMLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       + A+F   +  +  + Y  + ++ + L E  ++  ++ +Q    + +P
Sbjct: 84  --------TNTVVLALFLYSLLPVLKNTYTGILSVDQFLLESGKAMGMTKFQIMRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  +I+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVVAIGIAAMGTFVGAGGLGDIIVRGTSVSNGTSIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +    +
Sbjct: 189 IPTALMAVAADFI 201



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+++ IP+GI++  R  +S+ I   A ++   P+     +++  +         
Sbjct: 30  AYGVLFAAVVAIPLGIFMARRRKLSAWILTLANIIQTVPSLAMLSMLMLVMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +   +   +L N   G  +      E   +  +T ++  R + LP      + G 
Sbjct: 87  -VVLALFLYSLLPVLKNTYTGILSVDQFLLESGKAMGMTKFQIMRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            TA   A   + +      G       GLG  I   T   +   ++L 
Sbjct: 146 RTALVVAIGIAAMGTFVGAG-------GLGDIIVRGTSVSNGTSIILA 186


>gi|15611824|ref|NP_223475.1| putative osmoprotection binding protein [Helicobacter pylori J99]
 gi|4155319|gb|AAD06334.1| putative osmoprotection binding protein [Helicobacter pylori J99]
          Length = 553

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L      +   VA+ +    + Y++  F +   +Y I L       V +  +I  +  
Sbjct: 17  WLLHSVDMVIQHLVAMALKISVVKYLIKEF-HDRFIYFIDLLAQHFIIVALSSLIVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G  I+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSFIIALFSVLADQFV 236



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  + +I L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSLIVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|221209331|ref|ZP_03582312.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD1]
 gi|221170019|gb|EEE02485.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD1]
          Length = 263

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  +  I  L          +        V   I+DI Q+ 
Sbjct: 58  PVIYDRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAVTRPFGADFLPVARSIVDIGQTF 117

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V          +I   L  +  +F         S    L ++PRD+ E +R
Sbjct: 118 PPVAVLALAVPAVGFGLKPVLIALVLYGLLPVFE--------STIAGLEDVPRDVVEAAR 169

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 170 GMGMSGWQRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 222

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 223 AGLQTSNTAFVLQGGVIVGLLAVLV 247



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +   I ++I +  GI +  RP  +  +   +    +   FP  
Sbjct: 62  DRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAV-TRPFGADFLPVARSIVDIGQTFPPV 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  E A    ++GW
Sbjct: 121 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVVEAARGMGMSGW 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 177 QRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 229

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 230 TAFVLQGGVIVGLLAVLV 247


>gi|308062138|gb|ADO04026.1| osmoprotection protein (proWX) [Helicobacter pylori Cuz20]
          Length = 553

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLILYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAIVLKISVVKHLIQEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKNALLVLILYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADQFV 236


>gi|299532458|ref|ZP_07045849.1| ABC transporter permease protein [Comamonas testosteroni S44]
 gi|298719543|gb|EFI60509.1| ABC transporter permease protein [Comamonas testosteroni S44]
          Length = 251

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  V    ++ S+    VG+     P I     P+   L   P     PL +       
Sbjct: 63  TLTAVAASFVLGSLAAFAVGLIFVRWPAIERFADPYFNALNVMPRIALAPLFILWFGLGI 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +       +    T + +L   +AG      D   +  +        +  + LPG  P 
Sbjct: 123 GSK----IAVGCSLTFFIVLSATVAGIRGVSQDHLTLCKTLGAKAGTTFFEVTLPGAVPV 178

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G       A    + +E+ +         GLG  +A          V+  +L++   
Sbjct: 179 IFSGLRLGLIYALLGVVGTEIIASEK------GLGQTLAYLGSTFDINGVMALLLVLALL 232

Query: 566 VLALNRFL 573
            + + RF+
Sbjct: 233 GVGIVRFM 240



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 58/171 (33%), Gaps = 8/171 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  ++  +   +           T   + ++ V+  L  F    +  +   +     P 
Sbjct: 39  QPSGVLAYLRENVKTAKFWSDLGWTLTAVAASFVLGSLAAFAVGLIFVRWPAIERFADPY 98

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
            + +  +P +      +++F      K+        F + ++ V          +  + +
Sbjct: 99  FNALNVMPRIALAPLFILWFGLGIGSKIAVGCSLTFFIVLSATV--------AGIRGVSQ 150

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           D   + ++        F+ + +P ++P +   + + +      VV +E+I 
Sbjct: 151 DHLTLCKTLGAKAGTTFFEVTLPGAVPVIFSGLRLGLIYALLGVVGTEIIA 201


>gi|116249415|ref|YP_765256.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254065|emb|CAK12462.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 211

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +        + S++ I+L+ + +    AA+  R   V++    I+ ++P L      +
Sbjct: 12  LFEALLEHLYLVFSSVGIALVISLIVGIWAARRPRSFAVIIIFTGILFAVPSLALFALLI 71

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                     + G    ++  +          ++      IPRD+ E +        ++ 
Sbjct: 72  PIMGIGAAPAITGLAAYSLMILIR--------NIGMGFQAIPRDILEAADGMGYGTARRI 123

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P +MP +V  + ++M       V    I      I   G+G  I   I ++    
Sbjct: 124 WEVELPLAMPYIVGGIRIAM-------VTVIGIATVAAYINAGGLGVIIFEGIDQRFPEK 176

Query: 241 ILYAMLTMLGVIFLYD 256
           I+   L    +    D
Sbjct: 177 IIAGGLLTSFLALFAD 192



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++ V   + IA +I + VGIW   RP   + I  F  +L A P+   F L++  +     
Sbjct: 20  LYLVFSSVGIALVISLIVGIWAARRPRSFAVIIIFTGILFAVPSLALFALLIPIMGIGAA 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L+   +      ++ N+  G  A P D  E A        R    + LP   PY 
Sbjct: 80  PAITGLAAYSLMI----LIRNIGMGFQAIPRDILEAADGMGYGTARRIWEVELPLAMPYI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G   A       + V+   + G       GLG  I E  ++    +++ G L+     
Sbjct: 136 VGGIRIAMVTVIGIATVAAYINAG-------GLGVIIFEGIDQRFPEKIIAGGLLTSFLA 188

Query: 567 LALN 570
           L  +
Sbjct: 189 LFAD 192


>gi|23501118|ref|NP_697245.1| ABC transporter permease [Brucella suis 1330]
 gi|163842476|ref|YP_001626880.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|254705385|ref|ZP_05167213.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|261756100|ref|ZP_05999809.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|23346990|gb|AAN29160.1| ABC transporter, permease protein [Brucella suis 1330]
 gi|163673199|gb|ABY37310.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|261745853|gb|EEY33779.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 258

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLFAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  +  A     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLFANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|15966212|ref|NP_386565.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307308563|ref|ZP_07588265.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307317341|ref|ZP_07596781.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|15075482|emb|CAC47038.1| Putative uracil and uridine ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
 gi|306896930|gb|EFN27676.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306900963|gb|EFN31572.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 289

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 90/272 (33%), Gaps = 14/272 (5%)

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
                 +   +        ++R  F  +     +   V  +  I    +  G+  G A  
Sbjct: 4   AALAGAILFWLAAWAFNEWLVRKQFASDAANNAARVAVPLLFGITILVLWEGIVRGFAVP 63

Query: 363 SIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           S+        +Q ++  +           +  V+    +   +   V I I   P +   
Sbjct: 64  SVLLPAPSMIWQRLINSLPTLAADFRQTFLKSVLTGYALGCGLGFVVAILIDRSPFLQKG 123

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    ++A P     P++V    +   +       +++  T + +L N ++G +A  +
Sbjct: 124 LLPLGNFVSALPVIGVAPIMVMWFGFDWQSK----VAVVVIMTFFPMLVNTVSGLAAASH 179

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +++  ++  + W+    + LP  +P+           A   +IV+E      +     
Sbjct: 180 MERDLMRTYAASWWQTLVKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIV----- 234

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G+G  I+    + +   V   + +        
Sbjct: 235 GMGFRISTEVGRMNVDMVWAEIAVAAVAGSVF 266



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 98/263 (37%), Gaps = 19/263 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSA 75
           P +F +   VL  GI+            P  I   +  +L   +L     +T L+ +L+ 
Sbjct: 42  PLLFGITILVLWEGIVRGFAVPSVLLPAPSMIWQRLINSLP--TLAADFRQTFLKSVLTG 99

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
             +     FV A L  +S  L   L+P+ + + ++P++G     V++F   +  K     
Sbjct: 100 YALGCGLGFVVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWQSK----- 154

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              +  +     + M  +    L        ++ R++  S WQ    L +P + P +   
Sbjct: 155 ---VAVVVIMTFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLVKLRLPAAWPFIFNA 211

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTMLGVI 252
           + ++ +      + +E         P+ G+G  I+  +   ++    A +        V 
Sbjct: 212 LKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWAEIAVAAVAGSVF 266

Query: 253 FLYDQLLFRPMIVWSNKFRLERT 275
           +    L+ R +  W    R  RT
Sbjct: 267 YGMVALIERAVTFWHPSIRSGRT 289


>gi|224024789|ref|ZP_03643155.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM
           18228]
 gi|224018016|gb|EEF76023.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM
           18228]
          Length = 398

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++I+L F    +   A+  S  +   L P+++++  IP + +    L   V 
Sbjct: 179 TLWVSFFAILIALPFGLAVSIYLAEVASPEMRKFLKPVIELLNGIPSVVYGFFGLAVIVP 238

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  + +   V  + LA    +    +  +      ++ + PR + E S +   + WQ  +
Sbjct: 239 FLQHTFHLPVGESGLAGSLVLAIMALPTIITVAEDAMRSCPRSMREASLALGATQWQTIY 298

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     V+      PL  I + IA  + E
Sbjct: 299 KVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVMPASLLEPLRTIPATIAAELGE 358

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGVI  +  L+
Sbjct: 359 APAGGAHYQALFLLGVILFFITLI 382



 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +  ++ L   T++     I+IA    + V I++     P +   ++P  +LL
Sbjct: 161 FPTATPSPIFGILPLIGGTLWVSFFAILIALPFGLAVSIYLAEVASPEMRKFLKPVIELL 220

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
              P+ V+         P +            L  SL++       I+        + P 
Sbjct: 221 NGIPSVVYGFFGLAVIVPFLQHTFHLPVGESGLAGSLVLAIMALPTIITVAEDAMRSCPR 280

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     +  +
Sbjct: 281 SMREASLALGATQWQTIYKVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVMPAS 340

Query: 538 GL 539
            L
Sbjct: 341 LL 342


>gi|210609875|ref|ZP_03288159.1| hypothetical protein CLONEX_00343 [Clostridium nexile DSM 1787]
 gi|210152720|gb|EEA83726.1| hypothetical protein CLONEX_00343 [Clostridium nexile DSM 1787]
          Length = 238

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 71/231 (30%), Gaps = 10/231 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W  +     +          V     +D   ++    +T+    + + +  +I  
Sbjct: 6   VLLFVWQILSSAGIVPSFLLPSPLEVVQAFVKDFPLLMEHAKVTLTEGFLGLTLGVVIGF 65

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + +           P   +    P     PL+V  + Y           L++  T +
Sbjct: 66  VAAVLMDHFQGFYKAFYPIMVITQTIPTIAIAPLLVLWMGYE----MAPKVTLIVIVTFF 121

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I   ++ G  +   D   +  +      + + ++  P     +      +       ++
Sbjct: 122 PIAIGLLEGFQSADKDTVNLLKAMGANRLQIFLHVKFPSSLGRFFASLRISVSYCVVGAV 181

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +SE     +      GLG Y+    +  +F ++   + ++    L L   +
Sbjct: 182 ISEWLGGYN------GLGVYMTRVRKSYAFDKMFAVIFLISAISLLLMWLV 226



 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 82/238 (34%), Gaps = 15/238 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  + V  I++           P  +  +     D   L ++A  T       + + ++
Sbjct: 4   IVVLLFVWQILSSAGIVPSFLL-PSPLEVVQAFVKDFPLLMEHAKVTLTEGFLGLTLGVV 62

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A L    +       PI+ I Q+IP +      V++       K        +  
Sbjct: 63  IGFVAAVLMDHFQGFYKAFYPIMVITQTIPTIAIAPLLVLWMGYEMAPK--------VTL 114

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I     + +   + +   +  +D   + ++   +  Q F ++  P S+     ++ +S+S
Sbjct: 115 IVIVTFFPIAIGLLEGFQSADKDTVNLLKAMGANRLQIFLHVKFPSSLGRFFASLRISVS 174

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 V SE +   +      G+G Y+    K      +   +  +  +  L   L+
Sbjct: 175 YCVVGAVISEWLGGYN------GLGVYMTRVRKSYAFDKMFAVIFLISAISLLLMWLV 226


>gi|183603843|ref|ZP_02721975.2| ABC transporter, permease protein [Streptococcus pneumoniae
           MLV-016]
 gi|183578069|gb|EDT98597.1| ABC transporter, permease protein [Streptococcus pneumoniae
           MLV-016]
          Length = 253

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 10  RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L         ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLILGVLIACLMAVLMDSLTWFNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +      +  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWFNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|197249664|ref|YP_002147135.1| inner membrane ABC transporter permease YehY [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197213367|gb|ACH50764.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 389

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|222086798|ref|YP_002545332.1| nitrate/sulfonate ABC transporter [Agrobacterium radiobacter K84]
 gi|221724246|gb|ACM27402.1| nitrate/sulfonate ABC transporter [Agrobacterium radiobacter K84]
          Length = 377

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 15/277 (5%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G +  +FF  ++       R + V+    P + +     + +   +   W  ++      
Sbjct: 87  GKAQPSFFLLVAAGWLLAWRCVSVLSSTRPHSTVGNYGLRLLIPAIFGVWILIIWEAVTR 146

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCIT------MFRVVVLIIIASIIWIPVGIWIGFRP 412
            A  S+  +         +        T         V++  II       V I      
Sbjct: 147 GAGVSLVLLPPPSAIGARIVSSLPTLWTDIQQTIFKSVLIGYIIGCGSGFIVAILADRFA 206

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P    ++A P     P++V    +   +     + +++  T + +L N +AG 
Sbjct: 207 FLRRGLLPIGNFVSAMPIIGVAPIMVMWFGFDWQSK----AAVVVIMTFFPMLVNTVAGL 262

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A  N  +++  ++  + W+    + LP   P+           A   +IV+E       
Sbjct: 263 TAAGNIERDLMRTYASSYWQTLFKLRLPAAAPFIFNALKINSTLAMIGAIVAEFFG---- 318

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               +G+G  I+    + +   V   + +        
Sbjct: 319 -TPMSGMGFRISTENGRLNLDMVWAEIAVAAIAGSVF 354



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 92/240 (38%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R + P IF +   ++   +       +     P  I   +  +L   +L     +T  + 
Sbjct: 126 RLLIPAIFGVWILIIWEAVTRGAGVSLVLLPPPSAIGARIVSSLP--TLWTDIQQTIFKS 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   +I     F+ A LA +   L   L+PI + + ++PI+G     V++F   +  K 
Sbjct: 184 VLIGYIIGCGSGFIVAILADRFAFLRRGLLPIGNFVSAMPIIGVAPIMVMWFGFDWQSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++  S WQ  + L +P + P 
Sbjct: 244 A--------VVVIMTFFPMLVNTVAGLTAAGNIERDLMRTYASSYWQTLFKLRLPAAAPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+      +L  +++A + +  +
Sbjct: 296 IFNALKINSTLAMIGAIVAEFFGT-----PMSGMGFRISTENGRLNLD-MVWAEIAVAAI 349


>gi|333028741|ref|ZP_08456805.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332748593|gb|EGJ79034.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 256

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T++  ++  +I  +  + +GI +G    +S  + P+ ++L A P  V  P+ +       
Sbjct: 60  TLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPIFLIWFGLGP 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +      +L+ F       FN   GA     +    A     +  R    +++P    +
Sbjct: 120 ASKIASAVVLVFFPVF----FNAFQGAREVDRNLVANARILGASNRRVTFQVVIPSATSW 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             T    + G A   +IV E          T GLG  ++ S    +   V   ++I
Sbjct: 176 IFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNAAGVYAAMVI 225



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL +    T    L   VI ++   V      + R L  VL P + ++ ++P +     
Sbjct: 51  GSLWEQVWYTLYEALLGWVIGVVAGVVLGIALGRVRFLSDVLGPYIKVLNALPRIVLAPI 110

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K+  A +   F +         F+ +Q    + R+L   +R    S  +
Sbjct: 111 FLIWFGLGPASKIASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGASNRR 162

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P +   +  ++ +S        +  E I          G+G  ++ +    + 
Sbjct: 163 VTFQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLLVSASQGTFNA 216

Query: 239 LAILYAMLT 247
             +  AM+ 
Sbjct: 217 AGVYAAMVI 225


>gi|302521013|ref|ZP_07273355.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|302429908|gb|EFL01724.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 243

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 70/188 (37%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +  L  + ++ I L      A LA + + L   ++ +  I+ ++P L   + 
Sbjct: 23  QELTDATVQHVLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P +  E +R      W+
Sbjct: 83  LLPVFGL--------SPALVVTGLVLYSLTILVRNILAGLEAVPEEAREAARGMGYGSWR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +     ++   G+GS I   +     
Sbjct: 135 LLWEVELPLALPAVLGGVRIA-------TVSTVALTTVGAIVDYGGLGSLILDGLDTTFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AQVLAASV 195



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   VV + I   + +P+ +       ++  +     +L   P+   F L++       L
Sbjct: 33  VLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTVPSLAMFSLLLPVFG---L 89

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +P L ++ L+++ +   ++ N++AG  A P + +E A       WR    + LP   P  
Sbjct: 90  SPALVVTGLVLY-SLTILVRNILAGLEAVPEEAREAARGMGYGSWRLLWEVELPLALPAV 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +  +G       GLG+ I +  +     +V+   ++
Sbjct: 149 LGGVRIATVSTVALTTVGAIVDYG-------GLGSLILDGLDTTFKAQVLAASVL 196


>gi|204927650|ref|ZP_03218851.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204322992|gb|EDZ08188.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322616110|gb|EFY13026.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620559|gb|EFY17421.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622960|gb|EFY19802.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628732|gb|EFY25517.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631443|gb|EFY28201.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322638778|gb|EFY35473.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641057|gb|EFY37701.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646578|gb|EFY43086.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649056|gb|EFY45497.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654572|gb|EFY50893.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658661|gb|EFY54919.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665184|gb|EFY61372.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667928|gb|EFY64088.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671660|gb|EFY67781.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322677293|gb|EFY73357.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322680043|gb|EFY76082.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322685527|gb|EFY81523.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323191888|gb|EFZ77135.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323200044|gb|EFZ85132.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203793|gb|EFZ88813.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323205659|gb|EFZ90622.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323214096|gb|EFZ98859.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323217329|gb|EGA02049.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221927|gb|EGA06319.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223619|gb|EGA07932.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323232204|gb|EGA16310.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323234375|gb|EGA18462.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323237826|gb|EGA21885.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242610|gb|EGA26631.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323249635|gb|EGA33546.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252856|gb|EGA36691.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323255978|gb|EGA39718.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261004|gb|EGA44600.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266692|gb|EGA50179.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272245|gb|EGA55656.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 215

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPILGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ I   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPILGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|153808289|ref|ZP_01960957.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185]
 gi|149129192|gb|EDM20408.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185]
          Length = 398

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRSWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPAIIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L MLGV+  +  L+
Sbjct: 358 APAGGPHYQALFMLGVVLFFITLI 381



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + S ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRSWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|23464730|ref|NP_695333.1| ABC transporter permease [Bifidobacterium longum NCC2705]
 gi|296454497|ref|YP_003661640.1| ABC transporter permease [Bifidobacterium longum subsp. longum
           JDM301]
 gi|317481601|ref|ZP_07940637.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689570|ref|YP_004209304.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691531|ref|YP_004221101.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|23325298|gb|AAN23969.1| possible permease protein of ABC transporter system
           [Bifidobacterium longum NCC2705]
 gi|291516141|emb|CBK69757.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Bifidobacterium longum subsp. longum F8]
 gi|296183928|gb|ADH00810.1| ABC transporter permease [Bifidobacterium longum subsp. longum
           JDM301]
 gi|316916961|gb|EFV38347.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456387|dbj|BAJ67009.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320460906|dbj|BAJ71526.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 260

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  ++  + V      L H           +    I    ++L   A+ T    
Sbjct: 8   KRRMPTVIAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIET-WNTLGPAAAITGYEG 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   + ++ F  +       S        P+L   Q++P++      +++F     GK  
Sbjct: 67  VVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGK-- 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 125 ------IVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQI 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
              + +S +  +     +E +          G+G ++  A        I  A + ++ +
Sbjct: 179 YGGIRVSAAYIFATASTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATIVIILM 231



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  +A+   W  +G++              T +    +     IT +  VV  + A 
Sbjct: 15  IAVIVLLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAV 74

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++   P        P     PL +    +      + +++  +F
Sbjct: 75  FFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 135 ----PIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYGGIRVSAAYIF 190

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    +++      L
Sbjct: 191 ATASTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATIVIILMTCVL 235


>gi|331698882|ref|YP_004335121.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953571|gb|AEA27268.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 238

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 75/207 (36%), Gaps = 11/207 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +G++V+   +     +       +    +++IIA  I +P+G WIG        +   A 
Sbjct: 4   LGWLVDPAHWSGPGSIPQRLVEHLGYTALVMIIAIAIAVPLGAWIGHTGKGGFLVVGSAN 63

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L A P      L+V       + P + L LL I      +L    AG         + A
Sbjct: 64  GLRALPTLGVLVLLVQWTGLGIIGPLVALVLLAIP----PVLAGTYAGVRNVDAAVVDAA 119

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               + G      + LP   P  + G  ++     + + ++             GLG YI
Sbjct: 120 RGMGMRGRGVLFGVELPNALPLIIGGVRSSVLQVISTATIAAYVGL-------DGLGRYI 172

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
            +      FP+++ G +++    +  +
Sbjct: 173 IDGLSTRDFPQMIAGSILVALLAVVAD 199



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 74/202 (36%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+PQ            M+I++            + + G ++V   + ++++P LG L 
Sbjct: 16  PGSIPQRLVEHLGYTALVMIIAIAIAVPLGAWIGHTGKGGFLVVGSANGLRALPTLGVLV 75

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V +      G ++   L AI  +            Y  + N+   + + +R   + G 
Sbjct: 76  LLVQWTGLGIIGPLVALVLLAIPPVLA--------GTYAGVRNVDAAVVDAARGMGMRGR 127

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
              + + +P ++P ++  +  S+         +         + L G+G YI   +  +D
Sbjct: 128 GVLFGVELPNALPLIIGGVRSSVLQVISTATIA-------AYVGLDGLGRYIIDGLSTRD 180

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              ++   + +  +  + D  L
Sbjct: 181 FPQMIAGSILVALLAVVADLAL 202


>gi|167551117|ref|ZP_02344872.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205324068|gb|EDZ11907.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 389

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 74/199 (37%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++    
Sbjct: 185 LMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVK 244

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+AG +  P D  E A +  ++  + +
Sbjct: 245 QFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRF 304

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++ LP   P ++             ++V+ +   G       G GA + +     +   
Sbjct: 305 RHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDL 357

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 358 VLLGVIPVIALAVVIDALF 376


>gi|300311044|ref|YP_003775136.1| proline/glycine betaine ABC transporters permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073829|gb|ADJ63228.1| ABC-type proline/glycine betaine transport systems, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 216

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 85/205 (41%), Gaps = 10/205 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D  ++ +   +    +  A+ +++        L  + R L   L+ +  I+ ++P +   
Sbjct: 10  DWPNILELTLQHLKLVGIAVSLAIAIGVPLGILIVRVRWLAGPLMGLATIVLTLPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G      L AI A+F   +  +  + Y +L NI   ++E      ++ 
Sbjct: 70  GLMIPLFSKFGAGIGP---LPAITAVFLYSLLPIMRNTYLALENIEAGIKEAGIGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+   + +P ++P ++  +  +       VV +  ++    +I   G+G  I  AI + 
Sbjct: 127 WQRLRMVDLPLAVPVILGGVRTA-------VVMNIGVMAIAAIIGAGGLGVLILHAISQS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           ++  ++   + +  +  + D LL R
Sbjct: 180 NMQKLVVGAVMISVLAIIADTLLQR 204



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 75/203 (36%), Gaps = 8/203 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++ L    +  V + + +A  I +P+GI I     ++  +   A ++   P+   
Sbjct: 9   SDWPNILELTLQHLKLVGIAVSLAIAIGVPLGILIVRVRWLAGPLMGLATIVLTLPSIAL 68

Query: 434 FPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F L++   S +        ++  +   +   I+ N            KE      +T W+
Sbjct: 69  FGLMIPLFSKFGAGIGPLPAITAVFLYSLLPIMRNTYLALENIEAGIKEAGIGIGMTFWQ 128

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R + LP   P  + G  TA        +++         +   GLG  I  +  + + 
Sbjct: 129 RLRMVDLPLAVPVILGGVRTA-------VVMNIGVMAIAAIIGAGGLGVLILHAISQSNM 181

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
            ++V+G +++    +  +  L  
Sbjct: 182 QKLVVGAVMISVLAIIADTLLQR 204


>gi|237809638|ref|YP_002894078.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
 gi|237501899|gb|ACQ94492.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
          Length = 276

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 378 YVIWLGCITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y++W   ++  R++ + + I++++ + VG+  G  P I     P    ++  P     P+
Sbjct: 70  YLLWADTLSSLRLLLMGVGISALLGLSVGLLNGGIPLIRIPFSPLVTTVSLIPPMAILPI 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +        L       +++I      IL  ++     + P +    A +   T W+   
Sbjct: 130 LFIVFGLGDL-----AKVMLIVIGICPILIRDLQLKTLSLPEEQLIKAQTLGATSWQILL 184

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP + P          G AW   I +E  +       T GLG  I           +
Sbjct: 185 RMMLPQVLPRLFEAVRLTLGSAWLFLIAAEAIA------ATQGLGYRIFLVRRYLDMSVI 238

Query: 556 VLGVLIMCCFVLALNRFL 573
           +  V+ +     A++  L
Sbjct: 239 LPYVVWITLLAFAMDWLL 256



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +   +L  + IS L       L      + +   P++  +  IP +  L    
Sbjct: 72  LWADTLSSLRLLLMGVGISALLGLSVGLLNGGIPLIRIPFSPLVTTVSLIPPMAILPILF 131

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           +LA +  I       +   +     ++P +    +++   + WQ  
Sbjct: 132 IVFGLG--------DLAKVMLIVIGICPILIRDLQLKTLSLPEEQLIKAQTLGATSWQIL 183

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L   + +++   W F++A+E I          G+G  I L  +  D+  
Sbjct: 184 LRMMLPQVLPRLFEAVRLTLGSAWLFLIAAEAIA------ATQGLGYRIFLVRRYLDMSV 237

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           IL  ++ +  + F  D LL
Sbjct: 238 ILPYVVWITLLAFAMDWLL 256


>gi|157145837|ref|YP_001453156.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895]
 gi|157083042|gb|ABV12720.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895]
          Length = 215

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 84/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLTSLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+GI I     +++ +   A LL   P
Sbjct: 5   HYMMDNAGYLTSLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|259503286|ref|ZP_05746188.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
 gi|259168741|gb|EEW53236.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
          Length = 216

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 5/184 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   V+ +  +  I +P+G W      ++S    FAQ+L   P+     L++  +    L
Sbjct: 24  LVLTVITLAASMAIALPLGYWGARVKPVASFCVAFAQVLRIIPSLALLFLLIPVMGTGTL 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L        +L N I G +     +KEV ++  +   +  R I +P   PY 
Sbjct: 84  PALIALIVL----ALPPLLINTILGFNEVSPLYKEVGTALGMDRRQLRRQIEIPLALPYL 139

Query: 507 VTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A      +A++ + + + G   L  TGLG Y       G+     L +  M  F
Sbjct: 140 LNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMTYVVIGAVSVAALSLGAMLGF 199

Query: 566 VLAL 569
              +
Sbjct: 200 DFLI 203



 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +     QY  +  +  +  +  S+          A+ + +    V    +++ IP L  
Sbjct: 11  TNSGQYWQYVGQHLVLTVITLAASMAIALPLGYWGARVKPVASFCVAFAQVLRIIPSLAL 70

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +               L A+ A+    +  +  +       +    +EV  +  + 
Sbjct: 71  LFLLIPVMGTG--------TLPALIALIVLALPPLLINTILGFNEVSPLYKEVGTALGMD 122

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P ++P L+  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 123 RRQLRRQIEIPLALPYLLNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 175

Query: 236 QDLLAILYAMLTMLGV 251
            D+  ++   +++  +
Sbjct: 176 YDMTYVVIGAVSVAAL 191


>gi|154509100|ref|ZP_02044742.1| hypothetical protein ACTODO_01617 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798734|gb|EDN81154.1| hypothetical protein ACTODO_01617 [Actinomyces odontolyticus ATCC
           17982]
          Length = 509

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 83/235 (35%), Gaps = 14/235 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            V+V+  +     G+ +  +P     +        SL   A  T +  ++ ++  +    
Sbjct: 1   MVVVVWQLAHHASGLSQRILPAPTTILASAAASWPSLSAAAWATGVEGIAGLIAGIAVGI 60

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V A   +   RL  V +PIL + Q++P++      V++       K        I  +  
Sbjct: 61  VIAFTTSLWPRLTHVAMPILVVSQTVPLVAVAPLMVIWMGFTMASK--------IVVVAV 112

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + +  ++ + L  +P  L +       S      +  +P++   L   + ++ +  +
Sbjct: 113 FTAFPVALALLRGLGRVPTSLTDPMGVAGASRMWILLHARLPWAHTHLFSGIRIAATYAF 172

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +E +          G+G ++  A        +     T++ +  +   ++
Sbjct: 173 ASAATAEFMG------AKRGLGVFLLSAQSSFRTDLVFAGAGTLVVMTIILYAIV 221



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 10/194 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      T    +  +I    + I +       P ++    P   +    P     P
Sbjct: 34  WPSLSAAAWATGVEGIAGLIAGIAVGIVIAFTTSLWPRLTHVAMPILVVSQTVPLVAVAP 93

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  + +   +  + +++     T + +   ++ G    P    +       +      
Sbjct: 94  LMVIWMGFTMASKIVVVAVF----TAFPVALALLRGLGRVPTSLTDPMGVAGASRMWILL 149

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +  LP    +  +G   A   A+ ++  +E            GLG ++  +        V
Sbjct: 150 HARLPWAHTHLFSGIRIAATYAFASAATAEFMG------AKRGLGVFLLSAQSSFRTDLV 203

Query: 556 VLGVLIMCCFVLAL 569
             G   +    + L
Sbjct: 204 FAGAGTLVVMTIIL 217


>gi|16764837|ref|NP_460452.1| ABC transporter permease component [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56413544|ref|YP_150619.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180079|ref|YP_216496.1| putative binding-protein-dependent transport system, inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161614080|ref|YP_001588045.1| hypothetical protein SPAB_01819 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550061|ref|ZP_02343819.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167994474|ref|ZP_02575565.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168229875|ref|ZP_02654933.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168235575|ref|ZP_02660633.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168241016|ref|ZP_02665948.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168260340|ref|ZP_02682313.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168463088|ref|ZP_02697019.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168819252|ref|ZP_02831252.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194444895|ref|YP_002040741.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450272|ref|YP_002045530.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194470208|ref|ZP_03076192.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194737451|ref|YP_002114508.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197262513|ref|ZP_03162587.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197362469|ref|YP_002142106.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200389622|ref|ZP_03216233.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|224584000|ref|YP_002637798.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911724|ref|ZP_04655561.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16420012|gb|AAL20411.1| putative binding-protein-dependent transport system [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56127801|gb|AAV77307.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62127712|gb|AAX65415.1| putative binding-protein-dependent transport system, inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363444|gb|ABX67212.1| hypothetical protein SPAB_01819 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403558|gb|ACF63780.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194408576|gb|ACF68795.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456572|gb|EDX45411.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194712953|gb|ACF92174.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195634152|gb|EDX52504.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197093946|emb|CAR59436.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197240768|gb|EDY23388.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197290933|gb|EDY30286.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199602067|gb|EDZ00613.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205324994|gb|EDZ12833.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205327671|gb|EDZ14435.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335282|gb|EDZ22046.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205339509|gb|EDZ26273.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343633|gb|EDZ30397.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205350704|gb|EDZ37335.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|224468527|gb|ACN46357.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261246693|emb|CBG24503.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993391|gb|ACY88276.1| putative ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301158022|emb|CBW17517.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912475|dbj|BAJ36449.1| putative ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320086026|emb|CBY95800.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321224110|gb|EFX49173.1| Putative binding-protein-dependent transport system [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322714551|gb|EFZ06122.1| putative ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323129761|gb|ADX17191.1| putative ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332988374|gb|AEF07357.1| putative ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 215

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|13242050|gb|AAK16530.1|AF331043_10 transporter permease 1 [Arthrobacter keyseri]
          Length = 266

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 91/259 (35%), Gaps = 27/259 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TM 387
           V     + W  +V  VA+       G +           +I L  I            T+
Sbjct: 19  VPRASLVRWAIIVAIVAVLEFTTRTGMVSQSLMVPPSEILIRLAEIVPTDRFGQDVARTL 78

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             ++V   I  ++ +P+GI++   P     ++PF     A P  +F+P++++ +      
Sbjct: 79  TTILVSFTIGLVLGVPLGIFLWRVPAAGRILEPFIVTGYAMPTLLFYPVLLAVMGLNAG- 137

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               + ++    +   I    +   +A      ++A+S   +  +++  ++ P   P   
Sbjct: 138 ---PIIVIAASMSLIPIALTTMVALNAIKPILHKLANSVSASPRQYYLKVLFPAATPLIF 194

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G       A   ++  E        L + G+G        + +  ++   + ++    +
Sbjct: 195 PGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGFYYRELNTADMWAYIAVVIVLSV 248

Query: 568 ALNRFLWHPLYLYGTRCLR 586
            +N  L      +  + +R
Sbjct: 249 LVNGVL-----TWLEKRIR 262



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 87/268 (32%), Gaps = 23/268 (8%)

Query: 1   MFLYNILPPFISRR--IFPNIFDLLAFVLVIGIINIL-------LHGIQETTVPRDIVDI 51
           M +    P    RR         L+ + +++ I+ +L       +        P +I+  
Sbjct: 1   MKVIEKSPTVQERRKAALVPRASLVRWAIIVAIVAVLEFTTRTGMVSQSLMVPPSEILIR 60

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           +   +      Q  +RT   +L +  I L+          +    G +L P +    ++P
Sbjct: 61  LAEIVPTDRFGQDVARTLTTILVSFTIGLVLGVPLGIFLWRVPAAGRILEPFIVTGYAMP 120

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            L F    +                  I    +  +  +  +   +L  I   L +++ S
Sbjct: 121 TLLFYPVLLAVMGLNAGP--------IIVIAASMSLIPIALTTMVALNAIKPILHKLANS 172

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              S  Q +  +  P + P +   + +         VA E I      +   G+G     
Sbjct: 173 VSASPRQYYLKVLFPAATPLIFPGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGF 226

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +E +   +   +  ++ +  L + +L
Sbjct: 227 YYRELNTADMWAYIAVVIVLSVLVNGVL 254


>gi|303264588|ref|ZP_07350507.1| ABC transporter, permease protein [Streptococcus pneumoniae BS397]
 gi|307068809|ref|YP_003877775.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Streptococcus pneumoniae AP200]
 gi|302645958|gb|EFL76186.1| ABC transporter, permease protein [Streptococcus pneumoniae BS397]
 gi|306410346|gb|ADM85773.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Streptococcus pneumoniae AP200]
          Length = 252

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 5   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 64

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 65  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P
Sbjct: 122 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 176

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 177 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 80  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 136 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 196 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|301058183|ref|ZP_07199233.1| ABC transporter, substrate-binding protein, QAT family [delta
           proteobacterium NaphS2]
 gi|300447685|gb|EFK11400.1| ABC transporter, substrate-binding protein, QAT family [delta
           proteobacterium NaphS2]
          Length = 527

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 14/182 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L        +    +   ++L       L      L    +  + I+Q+IP       +
Sbjct: 16  ELWLRTGEHLMLTGVSSAAAMLIGIPVGILLFHRPWLRKATMGAIGILQTIP-------S 68

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +     L         L AI A+    +  +  +    L  + + + E ++   ++  Q+
Sbjct: 69  LAMLAFLLALLHRIGVLPAIIALTLYALLPIVRNTITGLQGVSKQVMEAAKGIGMTEGQQ 128

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P LV  +  +   G      S  I  G       G+G +I   +   +  
Sbjct: 129 LRMVRIPLAAPFLVAGIRTAAVMGVGIATLSAFIGAG-------GLGQFINRGLALSNTR 181

Query: 240 AI 241
            I
Sbjct: 182 LI 183



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 10/164 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V    A +I IPVGI +  RP +         +L   P+     ++   ++  H    L 
Sbjct: 30  VSSAAAMLIGIPVGILLFHRPWLRKATMGAIGILQTIPSLA---MLAFLLALLHRIGVLP 86

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + +       I+ N I G         E A    +T  +  R + +P   P+ V G  
Sbjct: 87  AIIALTLYALLPIVRNTITGLQGVSKQVMEAAKGIGMTEGQQLRMVRIPLAAPFLVAGIR 146

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           TA       + +S     G       GLG +I       +   +
Sbjct: 147 TAAVMGVGIATLSAFIGAG-------GLGQFINRGLALSNTRLI 183


>gi|322385471|ref|ZP_08059115.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus cristatus ATCC 51100]
 gi|321270209|gb|EFX53125.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus cristatus ATCC 51100]
          Length = 305

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP      
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTP 248

Query: 224 ----------GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                     GIG+ +   +    L ++   +L M        +L+ +
Sbjct: 249 AATLTSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSLAFNSVIKLITK 296



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-------- 537
              T W+    + L        T  +     A+  ++  ++       + T+        
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATL 252

Query: 538 ------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 G+G  +  + +      + L +L+M  
Sbjct: 253 TSVLTMGIGNTVMGTVDNNVLWSLALVLLMMSL 285


>gi|225862015|ref|YP_002743524.1| ABC transporter, permease protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229665|ref|ZP_06963346.1| ABC transporter, permease protein [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255670|ref|ZP_06979256.1| ABC transporter, permease protein [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|225726682|gb|ACO22533.1| ABC transporter, permease protein [Streptococcus pneumoniae
           Taiwan19F-14]
          Length = 253

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 10  RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|160932165|ref|ZP_02079556.1| hypothetical protein CLOLEP_01000 [Clostridium leptum DSM 753]
 gi|156868767|gb|EDO62139.1| hypothetical protein CLOLEP_01000 [Clostridium leptum DSM 753]
          Length = 242

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L++      L  + +   P  +        D   L   +  T       + + + 
Sbjct: 1   MLCLLLILWQAVSDLDLVPKFMFPSPVDVGAAFVEDFPILMANSGTTLAEGFLGLGLGIA 60

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             FV A L  + R L   L PIL I Q+IP +      V++       K        I  
Sbjct: 61  LAFVTAVLMDRYRFLYKSLYPILVITQTIPTVAIAPLLVLWMGYDMAPK--------IAL 112

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +     + M   +     +  +D   + RS   S  Q F  + +P S+     ++ +S+S
Sbjct: 113 VVIVCFFPMAVGLLDGFRSADQDTVNLLRSMGASKGQIFRLVKLPSSLGRFFSSLRVSVS 172

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYI 229
                 V +E +          G+G Y+
Sbjct: 173 YSIVGAVIAEWLGGNS------GLGVYM 194



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +D   ++     T+    + + +   +     + +     +   + P   +    P    
Sbjct: 35  EDFPILMANSGTTLAEGFLGLGLGIALAFVTAVLMDRYRFLYKSLYPILVITQTIPTVAI 94

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+V  + Y           L++    + +   ++ G  +   D   +  S   +  + 
Sbjct: 95  APLLVLWMGY----DMAPKIALVVIVCFFPMAVGLLDGFRSADQDTVNLLRSMGASKGQI 150

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R + LP     + +    +   +   ++++E           +GLG Y+    +  +F 
Sbjct: 151 FRLVKLPSSLGRFFSSLRVSVSYSIVGAVIAEWLGG------NSGLGVYMTRVRKSYAFD 204

Query: 554 EVVL 557
           ++  
Sbjct: 205 KMFA 208


>gi|332071468|gb|EGI81962.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA41301]
          Length = 238

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|198245532|ref|YP_002215645.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205352802|ref|YP_002226603.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857007|ref|YP_002243658.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197940048|gb|ACH77381.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205272583|emb|CAR37488.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|206708810|emb|CAR33138.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|326627871|gb|EGE34214.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 215

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 86/213 (40%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L M ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLAMPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     ++  +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLAMPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|149203256|ref|ZP_01880226.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149143089|gb|EDM31128.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 281

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 89/271 (32%), Gaps = 14/271 (5%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
             W     L+  +     +   +         +L         + + W C+V G++I   
Sbjct: 1   MGWLALGVLTWALGWAVNS--RLSHGPKTRATRLLVPVIFGLTIVVIWECLVRGLSISPV 58

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                  +   T+    +++W   +   +   +   ++         I I   P +   +
Sbjct: 59  LLPAPTAIAA-TFAKSTHILWADFVQTALKGALTGYVMGCGAAFLTAIAIDRFPFLQRGL 117

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P    +AA P     P++V    +   +    + +++ F     +L N + G +     
Sbjct: 118 LPVGNFVAALPIIGMAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVQGLTDTDAM 173

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +++  ++    W+    + LP   P+   G   A   A   +IV+E            G
Sbjct: 174 QRDLMRTYAAGYWQTLFKLRLPAAMPFIFNGLKIATTLALIGAIVAEFFGSPIK-----G 228

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +G  I+ S  + +   V   +++        
Sbjct: 229 MGFRISTSVGQLALDLVWAEIVVAAIAGSGF 259



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 16/242 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R + P IF L   V+   ++  L         P  I      +   H L     +T L+
Sbjct: 30  TRLLVPVIFGLTIVVIWECLVRGLSISPVLLPAPTAIAATFAKST--HILWADFVQTALK 87

Query: 72  -MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L+  V+     F+ A    +   L   L+P+ + + ++PI+G     V++F   +  K
Sbjct: 88  GALTGYVMGCGAAFLTAIAIDRFPFLQRGLLPVGNFVAALPIIGMAPILVMWFGFDWQSK 147

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                +   F         M  +  Q L +      ++ R++    WQ  + L +P +MP
Sbjct: 148 AAVVVVMVFF--------PMLVNTVQGLTDTDAMQRDLMRTYAAGYWQTLFKLRLPAAMP 199

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + ++ +      + +E         P+ G+G  I+ ++ +  L  +   ++    
Sbjct: 200 FIFNGLKIATTLALIGAIVAEFFGS-----PIKGMGFRISTSVGQLALDLVWAEIVVAAI 254

Query: 251 VI 252
             
Sbjct: 255 AG 256


>gi|108563229|ref|YP_627545.1| osmoprotection protein [Helicobacter pylori HPAG1]
 gi|107837002|gb|ABF84871.1| osmoprotection protein [Helicobacter pylori HPAG1]
          Length = 512

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + R    L+P+++ + +IP L      +           
Sbjct: 23  VALSGFLVLVFGVLIGVFVFYNSRARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 81  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 134

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 135 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 187

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 188 SVLADQFV 195



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 63/198 (31%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            +Y I L       V +   +  +  + +G+++ +     + + P    L   P+   F 
Sbjct: 9   FIYFIDLIAQHFIIVALSGFLVLVFGVLIGVFVFYNSRARAFLLPVVNFLYTIPSLALFA 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +     N  L L L  +      I+ +          +  + A          + 
Sbjct: 69  LFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKELFF 124

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +      P  + G   A        ++  +A  G +        A I       +   +
Sbjct: 125 RVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLL 177

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G LI+  F +  ++F+
Sbjct: 178 VAGSLIIALFSVLADQFV 195


>gi|116515916|ref|YP_817411.1| ABC transporter, permease protein [Streptococcus pneumoniae D39]
 gi|116076492|gb|ABJ54212.1| ABC transporter, permease protein [Streptococcus pneumoniae D39]
 gi|301795111|emb|CBW37581.1| ABC transporter, permease protein [Streptococcus pneumoniae INV104]
 gi|332071280|gb|EGI81775.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA17545]
          Length = 238

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|294146563|ref|YP_003559229.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
 gi|292676980|dbj|BAI98497.1| ABC-type transport system permease component [Sphingobium japonicum
           UT26S]
          Length = 271

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  +   +A      +       +          ++ R+ + + IA++  + +G+ +G  
Sbjct: 44  ILPLPGSMAEAMAALLFRADPLTNQFVFWADTLASLQRLGLGLGIATLSALLMGLVLGVL 103

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P + +   P    +A  P     P++   +             L++ G    ++ ++ A 
Sbjct: 104 PPVRATFGPLVTAVAVIPPIALLPILFIALGLGET----AKVALIVIGIAPVMMRDIAAH 159

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +  P +    A +   + W+    + LP   P  +     + G AW   I +E  +   
Sbjct: 160 VADLPREQVIKAQTLGASSWQIMIRVALPQAMPRLLHAVRLSLGPAWVFLISAEAIA--- 216

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582
                 GLG  I       S   ++  V  +    + ++  L      LY +  
Sbjct: 217 ---SDVGLGYRIFLVRRYLSMDVIIPYVAWIAILAILMDAALTLASRRLYPWAH 267



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+   + I+ L   +   +      +     P++  +  IP +  L    +   
Sbjct: 75  TLASLQRLGLGLGIATLSALLMGLVLGVLPPVRATFGPLVTAVAVIPPIALLPILFIALG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +  I       M   +   + ++PR+    +++   S WQ    + 
Sbjct: 135 LG--------ETAKVALIVIGIAPVMMRDIAAHVADLPREQVIKAQTLGASSWQIMIRVA 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP L+  + +S+   W F++++E I          G+G  I L  +   +  I+  
Sbjct: 187 LPQAMPRLLHAVRLSLGPAWVFLISAEAIA------SDVGLGYRIFLVRRYLSMDVIIPY 240

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWS 267
           +  +  +  L D    L  R +  W+
Sbjct: 241 VAWIAILAILMDAALTLASRRLYPWA 266


>gi|224583335|ref|YP_002637133.1| permease transmembrane component [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224467862|gb|ACN45692.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 389

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|197264003|ref|ZP_03164077.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197242258|gb|EDY24878.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
          Length = 389

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|148991942|ref|ZP_01821716.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP9-BS68]
 gi|147928991|gb|EDK80002.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP9-BS68]
          Length = 252

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 5   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 64

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 65  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 121

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P
Sbjct: 122 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 176

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 177 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 80  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 136 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 196 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|318061588|ref|ZP_07980309.1| putative ABC transporter permease protein [Streptomyces sp.
           SA3_actG]
 gi|318077172|ref|ZP_07984504.1| putative ABC transporter permease protein [Streptomyces sp.
           SA3_actF]
          Length = 243

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +  L  + ++ I L      A LA + + L   ++ +  I+ +IP L   + 
Sbjct: 23  QELTDATVQHVLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTIPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P +  E +R      W+
Sbjct: 83  LLPVFGL--------SPALVVTGLVLYSLTILVRNILAGLEAVPEEAREAARGMGYGSWR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +     ++   G+GS I   +     
Sbjct: 135 LLWEVELPLALPAVLGGVRIA-------TVSTVALTTVGAIVDYGGLGSLILDGLDTTFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AQVLAASV 195



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   VV + I   + +P+ +       ++  +     +L   P+   F L++       L
Sbjct: 33  VLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTIPSLAMFSLLLPVFG---L 89

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +P L ++ L+++ +   ++ N++AG  A P + +E A       WR    + LP   P  
Sbjct: 90  SPALVVTGLVLY-SLTILVRNILAGLEAVPEEAREAARGMGYGSWRLLWEVELPLALPAV 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +  +G       GLG+ I +  +     +V+   ++
Sbjct: 149 LGGVRIATVSTVALTTVGAIVDYG-------GLGSLILDGLDTTFKAQVLAASVL 196


>gi|227524816|ref|ZP_03954865.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088031|gb|EEI23343.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 309

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 22/224 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP     + L  + A VIS  F    A        +R   +L P+ +++  IP + +
Sbjct: 82  VGALP-MILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKILQPVTELLVGIPSVVY 140

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V +  N++ G   G  L+  F +F   +  +      SL ++P    + S +
Sbjct: 141 GFIGLSVVVPFVRNVFGGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLA 199

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-------------- 217
              + WQ  W + +  + PG++  ++  M+  +   +A +M++                 
Sbjct: 200 LGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVIGNASLMPHNLISPASTL 259

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           T +   G+G+ +  +++   L ++   +L M  +  L    + R
Sbjct: 260 TSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIGR 303



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 33/241 (13%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKI 418
           G + N  T     +        +    ++ I+A++I  P  I              +  +
Sbjct: 66  GTLWNPGTKTPDGHAAVGALPMILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKIL 125

Query: 419 QPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNV 468
           QP  +LL   P+ V+         P V +      + +    ++  +MI  T   I+   
Sbjct: 126 QPVTELLVGIPSVVYGFIGLSVVVPFVRNVFGGSGFGILSGTFVLFVMILPT---IVSMT 182

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +    + P  +++ + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 183 VDSLKSVPTYYRQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVI 242

Query: 529 WGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                              + T G+G  +  S +  +   + L +L+M      L  F+ 
Sbjct: 243 GNASLMPHNLISPASTLTSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIG 302

Query: 575 H 575
            
Sbjct: 303 R 303


>gi|146277504|ref|YP_001167663.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555745|gb|ABP70358.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 287

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +A  T    L    I      + A     +R +   ++P     Q+IPIL  
Sbjct: 78  TSRRSLVYHAWITLSATLVGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M   L +  R   ++  ++  S
Sbjct: 138 APMIIVVMNSIGVSGLLPKAIISAYLSF----FPVVVGMVTGLRSPDRMQMDLLSTYNAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 194 RSQTFWKLRLPASMPYLFASLKVGIAASLVGAIVGEL-----PTGAVAGLGARLLQGSYY 248

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              + I  A+ T   V      ++
Sbjct: 249 GQTIQIWAALFTAAIVAAALVGIV 272



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 77/196 (39%), Gaps = 5/196 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   +V   I + + I + + I     +   + P+A      P     P++
Sbjct: 82  SLVYHAWITLSATLVGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAIAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + ++  ++ G  +      ++ S+++ +  + +  +
Sbjct: 142 IVVMNSIGVSGLLPKAIISAYLSFFPVVVGMVTGLRSPDRMQMDLLSTYNASRSQTFWKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY           +   +IV E+ +         GLGA + + +  G   ++  
Sbjct: 202 RLPASMPYLFASLKVGIAASLVGAIVGELPTGA-----VAGLGARLLQGSYYGQTIQIWA 256

Query: 558 GVLIMCCFVLALNRFL 573
            +        AL   +
Sbjct: 257 ALFTAAIVAAALVGIV 272


>gi|227823026|ref|YP_002826998.1| ABC transporter, membrane spanning protein [Sinorhizobium fredii
           NGR234]
 gi|227342027|gb|ACP26245.1| ABC transporter, membrane spanning protein [Sinorhizobium fredii
           NGR234]
          Length = 289

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 87/253 (34%), Gaps = 14/253 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
           ++R HF    L   +   V  +  +    +  G+  G    S+        +  ++  + 
Sbjct: 23  LVRQHFTNRTLGNAARFAVPLLFGVTILVLWEGIVRGFGIPSVLLPAPSMIWARLINSVP 82

Query: 382 LGCIT-----MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
                     +  V+    +   +   V I I   P +   + P    ++A P     P+
Sbjct: 83  TLAADFRQTFLKSVLTGYALGCGLGFVVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPI 142

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V    +   +       +++  T + +L N ++G +   +  +++  ++  + W+    
Sbjct: 143 MVMWFGFDWQSK----VAVVVIMTFFPMLVNTVSGLATASHMERDLMRTYAASWWQTLVK 198

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP  +P+           A   +IV+E      +     G+G  I+    + +   V 
Sbjct: 199 LRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNVDMVW 253

Query: 557 LGVLIMCCFVLAL 569
             + +      A 
Sbjct: 254 AEIAVAAVAGSAF 266



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 94/237 (39%), Gaps = 22/237 (9%)

Query: 23  LAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLS 74
            A  L+ G+  ++L        GI    +P   +    +   V +L     +T L+ +L+
Sbjct: 39  FAVPLLFGVTILVLWEGIVRGFGIPSVLLPAPSMIWARLINSVPTLAADFRQTFLKSVLT 98

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              +     FV A L  +S  L   L+P+ + + ++P++G     V++F   +  K    
Sbjct: 99  GYALGCGLGFVVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWQSK---- 154

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +  +     + M  +    L        ++ R++  S WQ    L +P + P +  
Sbjct: 155 ----VAVVVIMTFFPMLVNTVSGLATASHMERDLMRTYAASWWQTLVKLRLPAAWPFIFN 210

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + ++ +      + +E         P+ G+G  I+  +   ++  +++A + +  V
Sbjct: 211 ALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVD-MVWAEIAVAAV 261


>gi|329955883|ref|ZP_08296686.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           clarus YIT 12056]
 gi|328525263|gb|EGF52313.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           clarus YIT 12056]
          Length = 423

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    A   ++    ++  ++ P+++++  IP + +    L   V 
Sbjct: 206 TLWVSLFAILIALPFGLAVAVYMSEVADHKIRNLMKPVIELLSGIPSVVYGFFGLIVIVP 265

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 266 LLQRVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 325

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 326 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHSILEPLRTIPATIAAELGE 385

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 386 APAGGAHYEALFLLGVVLFFISLL 409



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 395 IIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           + A +I +P G+ +           I + ++P  +LL+  P+ V+         PL+   
Sbjct: 211 LFAILIALPFGLAVAVYMSEVADHKIRNLMKPVIELLSGIPSVVYGFFGLIVIVPLLQRV 270

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    L  S+++       I+          P   +E + +   + W+    +++P
Sbjct: 271 FDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIP 330

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +G +   G A   ++   + +     +  +
Sbjct: 331 YSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHS 367


>gi|261339665|ref|ZP_05967523.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318491|gb|EFC57429.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 236

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  + + S+M  +LL       L ++   R +   ++ I ++  ++P L  L  
Sbjct: 38  LVYLGQQHLILVFSSMFFALLVGIPSGILLSRPAARGVAEYVMQIFNVGNTLPPLAVLAL 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 98  AMVVIGIG--------DTPAIIALFLASLLPIVRNTYAGLCSVPASLLEAANGIGMTKWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 150 RLRQVEIPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 202

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 203 PTLILGAAATALFALILDTLL 223



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 14/227 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V  + + +A  + G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 9   LLFVGAIIVVLALLTWGIGLETIKARQV-DLVYLGQQHLILVFSSMFFALLVGIPSGILL 67

Query: 409 GF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  ++  +     +    P      L +  +            + +   +   I+ 
Sbjct: 68  SRPAARGVAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDT----PAIIALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AG  + P    E A+   +T W+  R + +P  +P  ++G   A       + ++ +
Sbjct: 124 NTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNAWPVMLSGIRIATAINVGTAPLAFL 183

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                     +  G  I        FP ++LG      F L L+  L
Sbjct: 184 IG-------ASSYGELIFPGIYLNDFPTLILGAAATALFALILDTLL 223


>gi|55821035|ref|YP_139477.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822954|ref|YP_141395.1| phosphate ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|116627794|ref|YP_820413.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|55737020|gb|AAV60662.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738939|gb|AAV62580.1| phosphate ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
 gi|116101071|gb|ABJ66217.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 304

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 12/212 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--VHSLPQYASRTTLRMLSAMVIS 79
           L+ F++ + ++ +   G+    V +  +     + D         A    +      ++S
Sbjct: 33  LIVFIVALILLFVAQKGLATFFVNKVSLVEFLFSGDWSPSEGKFGALPMIIGSFLVTLLS 92

Query: 80  LLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGK 130
            L    +A  AA      S +    L P ++++  IP + +    L   V +   ++ G 
Sbjct: 93  ALIATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGT 152

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G  L+  F +F   +  +TF    +L  +PR   E S +   + WQ  W + +  + P
Sbjct: 153 GFGI-LSGTFVLFVMILPTVTFMTTDALRAVPRHYREASLAMGATRWQTIWRVTLNAAKP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 212 GIFTAVIFGMARAFGEALAVQMVVGNSAVIPT 243



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 62/177 (35%), Gaps = 14/177 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPA 430
             +     + +   +    ++  +IA+   I   I++    P  +  +QP  +LL   P+
Sbjct: 71  PSEGKFGALPMIIGSFLVTLLSALIATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPS 130

Query: 431 NVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            V+         P V        + +    ++  +MI  T   + F       A P  ++
Sbjct: 131 VVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPT---VTFMTTDALRAVPRHYR 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W+    + L    P   T  I     A+  ++  ++       + T+
Sbjct: 188 EASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGNSAVIPTS 244


>gi|312196967|ref|YP_004017028.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311228303|gb|ADP81158.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 530

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/479 (13%), Positives = 132/479 (27%), Gaps = 63/479 (13%)

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P +      VV +             A I     S  +    +    L        +  
Sbjct: 113 VPTIAIGPLLVVAYSPDG---------AKIVMSALSCFFITLVAAVAGLRAASPATLDAV 163

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +F    WQ+   + +  S+P L   + +S       V+      +GD +    G+G  +
Sbjct: 164 SAFGGGRWQQLVKVRLRSSIPLLASGLSISAPAAILGVM------IGDYLGGDRGLGVVM 217

Query: 230 ALAIKEQDLLAILY-AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
             A ++  +      A+++ L     +                              L  
Sbjct: 218 LQAQQQLAVERTWAIALVSTLACGLAFG-----------------------------LTA 248

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
                    +       F+P         R  G  R       +       +     +  
Sbjct: 249 LGAARLGADVEAPLDGGFTPTRR------RHHGPARLGLGVAKVVGAVLFGLVVWEILIA 302

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIW 407
              +    +        Y+          +V+  G   TM       +  ++  +     
Sbjct: 303 SSGLSSYFVKSPGDVWHYLATGTEAGHARHVLLKGLGQTMVDAGSGWVAGTVAALLAAAA 362

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +   P + S + PF  +L + P     PL+        +   +   ++    T    L  
Sbjct: 363 LTLFPAVGSAVMPFVIVLRSVPLIAMCPLIGLVFGRGLVGVTVIAGVV----TFVPSLVT 418

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           ++ G  A P+   +V   F          + LP   P     A  +  GA   S+++E  
Sbjct: 419 IVDGLRAVPSSATDVVHCFGGEARHALGKVRLPFSAPALFAAAKISMPGAVLGSVLAEWL 478

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             G       GLG  +A      ++  +   + ++    L L   +   L       +R
Sbjct: 479 ITG------HGLGYAMAYDVISSNYINLWASITVILIVSLGL-YLVVGALESAARDRIR 530



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 15/207 (7%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107
           +          H L +   +T +   S  V   +   + A        +G  ++P + ++
Sbjct: 321 LATGTEAGHARHVLLKGLGQTMVDAGSGWVAGTVAALLAAAALTLFPAVGSAVMPFVIVL 380

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +S+P++       + F     G  + A +        + V          L  +P    +
Sbjct: 381 RSVPLIAMCPLIGLVFGRGLVGVTVIAGVVTFVPSLVTIV--------DGLRAVPSSATD 432

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
           V   F          + +PFS P L     +SM G     V +E ++ G       G+G 
Sbjct: 433 VVHCFGGEARHALGKVRLPFSAPALFAAAKISMPGAVLGSVLAEWLITG------HGLGY 486

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFL 254
            +A  +   + +  L+A +T++ ++ L
Sbjct: 487 AMAYDVISSNYIN-LWASITVILIVSL 512


>gi|205353302|ref|YP_002227103.1| permease [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|207857599|ref|YP_002244250.1| permease transmembrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205273083|emb|CAR38036.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|206709402|emb|CAR33743.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|326628391|gb|EGE34734.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 389

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|218899945|ref|YP_002448356.1| ABC transporter, permease protein [Bacillus cereus G9842]
 gi|218541942|gb|ACK94336.1| ABC transporter, permease protein [Bacillus cereus G9842]
          Length = 268

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 77  TLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 133

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 134 --PNISSSIAMGVIISIIITILVIYSAFQEIDSNYIKVMDTFGANKWQCYKQVVLPASFP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 192 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 233



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   I 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEID 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 217

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 218 QGLGYLISYGFQVFNF 233


>gi|34849450|gb|AAP58949.1| phosphate transporter [Spiroplasma kunkelii CR2-3x]
          Length = 696

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 89/540 (16%), Positives = 178/540 (32%), Gaps = 44/540 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGFLTFT 119
            R  +     ++I+L+F       ++       S R+   ++ I+ ++  IP + F  F 
Sbjct: 95  LRIIISTFFVLLIALIFAIPLTIFSSLYISEYLSPRIKRKVIGIIQLLAGIPSVVFGLFA 154

Query: 120 VVYFMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +     L+           L     +    +  M      +L N+P      S +  LS 
Sbjct: 155 LAILGPLFMLMGAPSTSNLLVTSITLAFMGLPIMISLSINALENVPDSYRFGSLALGLSK 214

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS--YIALAIK 234
               + + +  +   ++  +MM ++      +A  MI          G G   +I L+I 
Sbjct: 215 THTTYRIVLRSAWFKIITAIMMGVARIIGETMAVMMIAGNVPDGLKLGNGFINFIFLSIA 274

Query: 235 EQ----------DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSW 284
                       +   +  + L  +G++      +    I+ S  F              
Sbjct: 275 TLASTIGLEMLENSGPMHESALYAIGLVLFIIVCIINIFIISSQAF---------HNRKR 325

Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
             +  + T  LR     + N  + L     +  R L   +      FL   +   VS+ L
Sbjct: 326 NYHARKTTKGLRLSKSYNANKINKLFYEHIEKTRGLKKFKDGIGMFFLISSTVIVVSFTL 385

Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
            I    +  G+  G+ W     I++   + D   ++    +T+  V+  II A  + + V
Sbjct: 386 VILATIIWKGL-FGMVWSD---IISTSIFDDGAGILSTFLVTLLLVICSIIFAIPLSLMV 441

Query: 405 GIWIGFRPHISSKIQPFAQL----LAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFG 459
            I++      +S      +     L++ P+ ++    +   +   HL  ++  S L +  
Sbjct: 442 AIYLNEYARPNSIFVKVVRFAIDVLSSTPSIIYGTFGLAFFIGVCHLPLSILSSGLTLTI 501

Query: 460 TQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
               I+   I    S   N  +  + +           ++LP   P  +T  I A G   
Sbjct: 502 VILPIMIRSIEDALSGVENSLRHSSLALGANKTSTTLKVVLPNAMPGIITAIILAIGRVI 561

Query: 519 NASIVSEVASWGHIHLRTTGL---GAYIAESTEKGSFPEVVLGVL-IMCCFVLALNRFLW 574
             S    +     + L   G    GA +       S      G + IM     A+   +W
Sbjct: 562 GESAPVYLTLGTAVRLPIAGFMSPGASMTTQILMLSKEGTTAGAIRIMFELAFAIMVLIW 621



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 76/184 (41%), Gaps = 7/184 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++     + I+  ++       V  DI+       D   +      T L ++ +++ ++ 
Sbjct: 378 VIVVSFTLVILATIIWKGLFGMVWSDIISTSIFD-DGAGILSTFLVTLLLVICSIIFAIP 436

Query: 82  FTFVYATLAAKSRRLGMVLVPI----LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            + + A    +  R   + V +    +D++ S P + + TF + +F+ +    +  + L+
Sbjct: 437 LSLMVAIYLNEYARPNSIFVKVVRFAIDVLSSTPSIIYGTFGLAFFIGV--CHLPLSILS 494

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           +   +    +  M  S+  +L  +   L   S +   +       + +P +MPG++  ++
Sbjct: 495 SGLTLTIVILPIMIRSIEDALSGVENSLRHSSLALGANKTSTTLKVVLPNAMPGIITAII 554

Query: 198 MSMS 201
           +++ 
Sbjct: 555 LAIG 558


>gi|182685136|ref|YP_001836883.1| ABC transporter, permease protein [Streptococcus pneumoniae CGSP14]
 gi|182630470|gb|ACB91418.1| ABC transporter, permease protein [Streptococcus pneumoniae CGSP14]
          Length = 249

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L
Sbjct: 6   RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVAL 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 65  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 119 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 177 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 209



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 77  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 132

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 133 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 193 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 220


>gi|169833388|ref|YP_001695556.1| ABC transporter, permease protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172079594|ref|ZP_02709297.2| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|183603227|ref|ZP_02713471.2| ABC transporter, permease protein [Streptococcus pneumoniae SP195]
 gi|183603580|ref|ZP_02715874.2| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|237650491|ref|ZP_04524743.1| ABC transporter, permease protein [Streptococcus pneumoniae CCRI
           1974]
 gi|237822391|ref|ZP_04598236.1| ABC transporter, permease protein [Streptococcus pneumoniae CCRI
           1974M2]
 gi|307128465|ref|YP_003880496.1| ABC transporter permeae [Streptococcus pneumoniae 670-6B]
 gi|168995890|gb|ACA36502.1| ABC transporter, permease protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172042433|gb|EDT50479.1| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|183572248|gb|EDT92776.1| ABC transporter, permease protein [Streptococcus pneumoniae SP195]
 gi|183573981|gb|EDT94509.1| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|306485527|gb|ADM92396.1| ABC transporter, permease protein [Streptococcus pneumoniae 670-6B]
          Length = 253

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 6   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 66  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P
Sbjct: 123 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 178 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|157145835|ref|YP_001453154.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895]
 gi|157083040|gb|ABV12718.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895]
          Length = 236

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  L + ++M  +L+       L ++   +     ++ + ++  ++P L  L  
Sbjct: 39  LLYLGKQHLLLVFTSMFFALVIGIPSGILLSRPAAKGFAEYVMQLFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             ++ AIFA+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DVPAIFALFLASLLPVVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
           +   + +P + P ++  + ++
Sbjct: 151 RLRQVELPNAWPVMLAGIRIA 171



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 16/220 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 +A+ +A    G  +     + V  +++LG   +  V   +  A +I IP GI +
Sbjct: 10  LGFTGAIALVLALLVWGVGLETIKARQV-DLLYLGKQHLLLVFTSMFFALVIGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   QL       P      L +  +       ++     +   +   ++
Sbjct: 69  -SRPAAKGFAEYVMQLFNVGNTLPPLAVLALAMVIIGIG----DVPAIFALFLASLLPVV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  + G   A   A N      
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLAGIRIA--TAINVGTAPL 181

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
               G         G  I        FP ++LG       
Sbjct: 182 AFLIGASSY-----GELIFPGIYLNDFPTLILGATATALV 216


>gi|150397572|ref|YP_001328039.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029087|gb|ABR61204.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 289

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 88/273 (32%), Gaps = 10/273 (3%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +   +      L+               +   N   L         + + W  +V G A+
Sbjct: 3   LAALAGAILFWLAAWALNQWLVQKRFASNVANNAAHLAVPLLFGITILVLWEGIVRGFAV 62

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASIIWIPVGIWIGFRPHISS 416
                    ++       +  +      T  + V+    +   +   V I I   P +  
Sbjct: 63  PSVLLPAPSMIWLRLINSLPTLAADFRQTFLKSVLTGYALGCGLGFIVAILIDRSPFLQK 122

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P    ++A P     P++V    +   +       +++  T + +L N ++G +A  
Sbjct: 123 GLLPLGNFVSALPVIGVAPIMVMWFGFDWPSK----VAVVVIMTFFPMLVNTVSGLAAAS 178

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +  +++  ++  + W+    + LP  +P+           A   +IV+E      +    
Sbjct: 179 HMERDLMRTYAASWWQTLLKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIV---- 234

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            G+G  I+    + +   V   + +      A 
Sbjct: 235 -GMGFRISTEVGRMNVDMVWAEIAVAAVAGSAF 266



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 74/180 (41%), Gaps = 14/180 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+   +     F+ A L  +S  L   L+P+ + + ++P++G     V++F   +P K 
Sbjct: 96  VLTGYALGCGLGFIVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWPSK- 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +  +     + M  +    L        ++ R++  S WQ    L +P + P 
Sbjct: 155 -------VAVVVIMTFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLLKLRLPAAWPF 207

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  +   ++  +++A + +  V
Sbjct: 208 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVD-MVWAEIAVAAV 261


>gi|150016811|ref|YP_001309065.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149903276|gb|ABR34109.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 258

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 19/242 (7%)

Query: 23  LAFVLVIGIINILLHG-----IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +   +   ++   L       +    +P     I+ I  +   L   A  T  R +    
Sbjct: 16  IGIFIAWELVAFFLEQVMHDPMAGAKLPYPHSVIISIAENFTDLMSAAGLTFSRAVFGFA 75

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +     FV A + + S+    + +P L I Q IP+LG          ++   +       
Sbjct: 76  LGAAIGFVLAIIMSLSKIAEKISLPYLIISQMIPVLGLAPIIFTLVRDMNTSR------- 128

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I        + ++ +M   L ++  D +E+  S+       ++ L +P+SMP L   + 
Sbjct: 129 -IVIAAYITFFPVSVNMLSGLNSVESDKKELLYSYAAKKKSIYYKLMIPYSMPYLFAGLK 187

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++        +  +M+          GIG  +  ++          +++T   +  L   
Sbjct: 188 IAAPMSITASILVDMLGSSG------GIGVKLLYSLYSGTKDVFWGSVVTSALMGILSYF 241

Query: 258 LL 259
           ++
Sbjct: 242 IV 243



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 78/200 (39%), Gaps = 11/200 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++   ++    +T  R V    + + I   + I +           P+  +    P    
Sbjct: 54  ENFTDLMSAAGLTFSRAVFGFALGAAIGFVLAIIMSLSKIAEKISLPYLIISQMIPVLGL 113

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++ + V     + N    ++  + T + +  N+++G ++  +D KE+  S+       
Sbjct: 114 APIIFTLVR----DMNTSRIVIAAYITFFPVSVNMLSGLNSVESDKKELLYSYAAKKKSI 169

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +++P   PY   G   A   +  ASI+ ++         + G+G  +  S   G   
Sbjct: 170 YYKLMIPYSMPYLFAGLKIAAPMSITASILVDMLG------SSGGIGVKLLYSLYSG-TK 222

Query: 554 EVVLGVLIMCCFVLALNRFL 573
           +V  G ++    +  L+ F+
Sbjct: 223 DVFWGSVVTSALMGILSYFI 242


>gi|308449210|ref|XP_003087890.1| hypothetical protein CRE_17713 [Caenorhabditis remanei]
 gi|308252053|gb|EFO96005.1| hypothetical protein CRE_17713 [Caenorhabditis remanei]
          Length = 1270

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 68/458 (14%), Positives = 143/458 (31%), Gaps = 32/458 (6%)

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQS--LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           IG  L          +      + +   +  +  D    +R   +   +  W   +P ++
Sbjct: 502 IGGFLILPILTLALSLIPYLMRLVRGSMIDALESDYVTSARLRGIPERRIIWKHVLPNAL 561

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             +V    +++       +  E++         PGIG+ +  AI+ +D+  I   +L + 
Sbjct: 562 VPVVQGTALTIRVLLSGALIIEVV------FSYPGIGNALNAAIEMRDIPTIQAIVLLLT 615

Query: 250 GVIFLYDQL------LFRPMIVWSNKFRLERTTGIYPADSWV--LYLFRKTNFLRFIGYS 301
             + + + +      L  P I  + K +            W     +  K          
Sbjct: 616 ICVVVVNLIADLMTTLLTPKIRTAKKHKARSPGLRQALRLWKSGRPITVKPVDQYQFRRG 675

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
             +          K   +   +RF F    L L        ++      +V       A 
Sbjct: 676 EMSTLHWYQRKFFKALISERQVRFGFVVTSLILIFALIGPVLVPFEPTALVGMT--YGAP 733

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQ 419
           ++  ++   +   DV   +  G  + ++  +   ++A II   +GI   F    +   + 
Sbjct: 734 EAQAFLGYDYIGHDVWSRVLAGGASIIWMTLAASLVALIIGSSLGILAAFARDKVDQFVT 793

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI--AGASAFPN 477
               +  AFP  +   L+VS +         WL +L +       +  +      +    
Sbjct: 794 WLTDVFMAFPDLILVLLIVSMLGR-----EPWLIVLTVSIAFIPGVVRLARSVALNLVEQ 848

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH-IHLRT 536
           ++ E A     +        ILP +    +          W   ++S +A  G+ I    
Sbjct: 849 EYVEAAKILGYSKSYILCREILPNMLTPLL--IHLGVMLTWAVGMLSGLAFLGYGIAPPA 906

Query: 537 TGLGAYIAESTEKGSFP--EVVLGVLIMCCFVLALNRF 572
              G  I E+          V   V+++  F L  N  
Sbjct: 907 ADWGLMINENRAGLLVQPWAVFAPVILIALFALGTNVL 944



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
               L+A +++L+       LAA +R ++   +  + D+  + P L      +V  +   
Sbjct: 760 IWMTLAASLVALIIGSSLGILAAFARDKVDQFVTWLTDVFMAFPDL-----ILVLLIVSM 814

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G+     +  +   F   V  +  S+  +L  + ++  E ++    S         +P 
Sbjct: 815 LGREPWLIVLTVSIAFIPGVVRLARSV--ALNLVEQEYVEAAKILGYSKSYILCREILPN 872

Query: 188 SMPGLV--WNMMMSMSGGWFFVVA 209
            +  L+    +M++ + G    +A
Sbjct: 873 MLTPLLIHLGVMLTWAVGMLSGLA 896


>gi|307317340|ref|ZP_07596780.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306896929|gb|EFN27675.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 294

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 71/208 (34%), Gaps = 9/208 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +                  SL  +A  T    L    I  +   + A     +R
Sbjct: 64  VLPAPHQVIAEIWDTTANKAITSKRSLVYHAWITLSATLLGFGIGTVLGVLLAVGIVHNR 123

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L+P +   Q+IPIL      +V    +    ++   L + +  F   V  M   +
Sbjct: 124 AMDRSLMPWVIASQTIPILAIAPMIIVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGL 183

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             S   I  DL     ++  S  Q FW L  P SMP L  ++ ++++      +  E+  
Sbjct: 184 R-SPETIQLDLM---HTYNASPAQTFWKLRWPSSMPYLFTSLKVAVAISLVGAIVGEL-- 237

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                  + G+G+ +         + I 
Sbjct: 238 ---PTGAVAGLGARLLAGSYYGQTVQIW 262



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   I +++ + + + I     +   + P+       P     P++
Sbjct: 89  SLVYHAWITLSATLLGFGIGTVLGVLLAVGIVHNRAMDRSLMPWVIASQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 149 IVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGLRSPETIQLDLMHTYNASPAQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RWPSSMPYLFTSLKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 262


>gi|296102566|ref|YP_003612712.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057025|gb|ADF61763.1| putative osmoprotectant transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 215

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++ I  I+ +IP +   
Sbjct: 10  NWDYLLTLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y++ L    ++ V + + +A II +P+GI I     +++ +   A ++   P
Sbjct: 5   HYILDNWDYLLTLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|85710058|ref|ZP_01041123.1| ABC transporter permease protein [Erythrobacter sp. NAP1]
 gi|85688768|gb|EAQ28772.1| ABC transporter permease protein [Erythrobacter sp. NAP1]
          Length = 512

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 84/225 (37%), Gaps = 11/225 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG----F 115
            L    +   +   SA+ + ++     A  A++S  +  + +    ++Q+IP L     F
Sbjct: 10  GLGDKFAAHIVLAASAIGLGIIVALPLAVWASRSATVSRIALGFASLVQTIPALALLALF 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +               L A  A+    +  +  +   +  N+   + E +    ++
Sbjct: 70  FPILLSLRAVFGEDLPTLGFLPAFLALALYALLPILRNAVTAQANLDPGVLEAADGVGMT 129

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQK   +  P S P ++  +  +    W  + A+ +     T I  P +G  I   ++ 
Sbjct: 130 SWQKLTLVEAPLSAPFIMAGIRTA--SVW-TIGAATL----STTIGQPSLGDPIFAGLQT 182

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
           Q+   +L   +   G+  + D LL      ++ + RL+   G+  
Sbjct: 183 QNWALVLAGCIASAGLALVVDALLGVIENGFAKRSRLQWGAGVAA 227



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 15/191 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV----FFPLVVSCVSYYHL 446
              I +  I+ +P+ +W      +S     FA L+   PA      FFP+++S  + +  
Sbjct: 23  ASAIGLGIIVALPLAVWASRSATVSRIALGFASLVQTIPALALLALFFPILLSLRAVFGE 82

Query: 447 NPNLWLSLLMIFGTQWYILF----NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +      L        Y L     N +   +       E A    +T W+    +  P  
Sbjct: 83  DLPTLGFLPAFLALALYALLPILRNAVTAQANLDPGVLEAADGVGMTSWQKLTLVEAPLS 142

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+ + G  TA      A+ +S         +    LG  I    +  ++  V+ G +  
Sbjct: 143 APFIMAGIRTASVWTIGAATLS-------TTIGQPSLGDPIFAGLQTQNWALVLAGCIAS 195

Query: 563 CCFVLALNRFL 573
               L ++  L
Sbjct: 196 AGLALVVDALL 206


>gi|319758210|gb|ADV70152.1| ABC-type phosphate transport system, permease component
           [Streptococcus suis JS14]
          Length = 305

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 18/221 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYASRTTLR 71
           +   L   L++ I+ ++L  + +  +    VD V IT        +  S    A      
Sbjct: 25  VITFLCLSLIVFIVAMILIFVAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISG 84

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
                ++S +     A  AA        +R   +L P+++++  IP   +    L   V 
Sbjct: 85  SFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIPSGVYGFIGLQVVVP 144

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E S +   + WQ  W
Sbjct: 145 FVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIW 203

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + +  + PG+   ++  M+  +   +A +M+V    VIP 
Sbjct: 204 RVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPT 244



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFP 429
               +   + +   +    ++  ++A+ I I   +++        +  +QP  +LL   P
Sbjct: 71  PSSKIFGALPMISGSFIVTILSAVVATPIAIGAAVFMTEISPKRGAKILQPVIELLVGIP 130

Query: 430 ANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           + V+         P V S      + +   +++  +MI  T   + F  +    A P  +
Sbjct: 131 SGVYGFIGLQVVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E + +   T W+    +IL    P   T  I     A+  ++  ++       + T+
Sbjct: 188 REASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 245


>gi|183603596|ref|ZP_02718184.2| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183575920|gb|EDT96448.1| ABC transporter, permease protein [Streptococcus pneumoniae
           CDC3059-06]
          Length = 253

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 6   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 66  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P
Sbjct: 123 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 177

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 178 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|254436828|ref|ZP_05050322.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198252274|gb|EDY76588.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 309

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +A  T    L   V+      + A     +R +   ++P     Q+IPIL  
Sbjct: 98  TSRRSLVYHAWVTLSATLLGFVMGTTMGVLLAVGIVYNRTMDKSVMPWAITSQTIPILAL 157

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    +    + + +  F    + +   M + L +  R   ++ R++  +
Sbjct: 158 APMIIVMLGAIGIQGLFPKSIISAYLSF----FPVVVGMVKGLRSPDRMQLDLLRTYSAN 213

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + +S      + +E+           G G+ + +  + 
Sbjct: 214 AHQGFWKLRLPASMPYLFASLKIGISAALVGAIVAELPTGARA-----GFGARMLVGDQY 268

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              +    A+        L   +L
Sbjct: 269 GQPMVTWAALFGAAITAALLVAIL 292



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 74/208 (35%), Gaps = 9/208 (4%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++  ++ + + + + + I +   +   + P+A      P     P++
Sbjct: 102 SLVYHAWVTLSATLLGFVMGTTMGVLLAVGIVYNRTMDKSVMPWAITSQTIPILALAPMI 161

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +      S++  + + + ++  ++ G  +      ++  ++     + +  +
Sbjct: 162 IVMLGAIGIQGLFPKSIISAYLSFFPVVVGMVKGLRSPDRMQLDLLRTYSANAHQGFWKL 221

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS----FP 553
            LP   PY           A   +IV+E+ +         G GA +    + G     + 
Sbjct: 222 RLPASMPYLFASLKIGISAALVGAIVAELPTGAR-----AGFGARMLVGDQYGQPMVTWA 276

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            +    +     V  L+      L   G
Sbjct: 277 ALFGAAITAALLVAILSWIERRTLARMG 304


>gi|170723470|ref|YP_001751158.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
 gi|169761473|gb|ACA74789.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas putida W619]
          Length = 217

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
             LD   + Q   +  + +  A+ +++L       L  +   +   L     ++ +IP +
Sbjct: 8   AHLDWALVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPVVAGPLQASATVLLTIPSI 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 + ++     G      L AI A+F   +  +  + Y +L N+   + E +R   
Sbjct: 68  ALFGLLLPFYSKFGQGLGP---LPAITAVFLYSLLPILRNTYLALTNVEPGIREAARGIG 124

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I
Sbjct: 125 MTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILTSI 177

Query: 234 KEQDLLAILYAMLTM 248
              D+  +L   + +
Sbjct: 178 SRSDMSMLLVGAVLV 192



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F + D   V+ L    +  V + + +A ++ +P+GI +   P ++  +Q  A +L 
Sbjct: 3   LLDTFAHLDWALVLQLTWQHIMLVGIAVGLAILVGVPLGILMTRFPVVAGPLQASATVLL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             P+   F L++   S +        ++  +   +   IL N     +      +E A  
Sbjct: 63  TIPSIALFGLLLPFYSKFGQGLGPLPAITAVFLYSLLPILRNTYLALTNVEPGIREAARG 122

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +  R + LP   P  + G  TA         ++     G       GLG  I  
Sbjct: 123 IGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILT 175

Query: 546 STEKGSFPEVVLGVLIMC 563
           S  +     +++G +++ 
Sbjct: 176 SISRSDMSMLLVGAVLVS 193


>gi|325964041|ref|YP_004241947.1| ABC-type proline/glycine betaine transporter, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470128|gb|ADX73813.1| ABC-type proline/glycine betaine transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 247

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 13/218 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +    ++++IA+ I +PVG+++G        +   A
Sbjct: 7   TFAWLADPENWTGSAGIPARLAEHLQYTGLVMLIAAAIAVPVGLYVGHTGRGRVAVVALA 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P      L V       + P   L +L    T   +L    AG S+      + 
Sbjct: 67  GALRALPTLGLLTLFVLVAGIGLMPPIWALVIL----TVPPLLAGTYAGISSVDRTVVDA 122

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +      LP        G  T          V    + G       GLG Y
Sbjct: 123 ARAMGMTELQVLFRAELPNALTVMFGGFRTGVLQVIATVSVVAYINLG-------GLGRY 175

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF--LWHPLY 578
           + +      FP+++ G L++    +A++    L+  L+
Sbjct: 176 LFDGLVLSDFPQMLGGSLLIAALAIAVDLVLSLFQRLF 213



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +P   +         M+I+             + R  + +V +   ++++P LG LT 
Sbjct: 21  AGIPARLAEHLQYTGLVMLIAAAIAVPVGLYVGHTGRGRVAVVALAGALRALPTLGLLTL 80

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+              +  I+A+    V  +    Y  + ++ R + + +R+  ++  Q
Sbjct: 81  FVLVAGIGL--------MPPIWALVILTVPPLLAGTYAGISSVDRTVVDAARAMGMTELQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             +   +P ++  +       +      V+A+  +V     I L G+G Y+   +   D 
Sbjct: 133 VLFRAELPNALTVMFGGFRTGV----LQVIATVSVVA---YINLGGLGRYLFDGLVLSDF 185

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L   L +  +    D +L
Sbjct: 186 PQMLGGSLLIAALAIAVDLVL 206


>gi|317480354|ref|ZP_07939455.1| phosphate ABC transporter [Bacteroides sp. 4_1_36]
 gi|316903529|gb|EFV25382.1| phosphate ABC transporter [Bacteroides sp. 4_1_36]
          Length = 394

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    A   ++  + ++  +L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVAIYMSEVANSQVRNLLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 FLQQVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGPHYEALFLLGVVLFFISLL 381



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++       + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVAIYMSEVANSQVRNLLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|77409210|ref|ZP_00785920.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77172186|gb|EAO75345.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|319745010|gb|EFV97338.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 305

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 102/266 (38%), Gaps = 27/266 (10%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAMVIS 79
           L+ F++ + +I +   G+    V    +         +  +    A           ++S
Sbjct: 33  LIVFIVAMILIFVAQKGLSTFFVDGVKLTDFLFNTKWEPSAKSFGALPMIAGSFIVTILS 92

Query: 80  LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPG 129
            +    +A  AA        +    +L P ++++  IP + +    L   V +  +++ G
Sbjct: 93  AIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVGIPSVVYGFIGLQIIVPFVRSIFGG 152

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W + +  + 
Sbjct: 153 TGFGI-LSGVCVLFVMILPTVTFMTVDSLRAVPRHYKEASLAMGATRWQTIWRVILNAAR 211

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYIALAIKE 235
           PG+   ++  M+  +   +A +M+V                 T +   GIG+ +   ++ 
Sbjct: 212 PGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLTTPAATLTSVLTMGIGNTVMGTVQN 271

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
             L ++   +L M        +L+ R
Sbjct: 272 NVLWSLALVLLIMSLAFNTVIKLITR 297



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 89/279 (31%), Gaps = 39/279 (13%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ--SIGYIVNHFTYQDVLY--- 378
           +   P    +L    +    L +     +  + +    Q     + V+     D L+   
Sbjct: 9   KLTSPSKNSRLEKFGKGITFLSLALIVFIVAMILIFVAQKGLSTFFVDGVKLTDFLFNTK 68

Query: 379 ---------VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAA 427
                     + +   +    ++  IIA+   I   +++    P   S  +QP  +LL  
Sbjct: 69  WEPSAKSFGALPMIAGSFIVTILSAIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVG 128

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P+ V+         P V S            + +L +      + F  +    A P  +
Sbjct: 129 IPSVVYGFIGLQIIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-- 537
           KE + +   T W+    +IL    P   T  +     A+  ++  ++       L T+  
Sbjct: 188 KEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLT 247

Query: 538 ------------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                       G+G  +  + +      + L +LIM  
Sbjct: 248 TPAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|253688775|ref|YP_003017965.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251755353|gb|ACT13429.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 271

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 83/210 (39%), Gaps = 17/210 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+   + I+ L + ++   A         L P++ ++  IP L  L    + F 
Sbjct: 75  TQASLVRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPILFIVFG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   + Q   NIP++    +++   + W     + 
Sbjct: 135 LD--------ELSKVMLIVIGVTPMLARDLEQRARNIPQETLIKAQTLGANSWVVVLRVI 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L+ ++ + +   W F++++E I          G+G  I L  +   +  IL  
Sbjct: 187 LPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVILPY 240

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           ++ +  + +L D   + L R    WS + +
Sbjct: 241 VVWITLLAWLMDMALRWLHRRWFPWSEESK 270



 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 14/210 (6%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ WL    ++ R+ + + IAS++ +  GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWLDTQASLVRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VMLIVIGVTPMLARDLEQRARNIPQETLIKAQTLGANSWVVVLR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP +    +       G AW   I +E  S       T GLG  I       +   ++
Sbjct: 185 VILPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYMAMDVIL 238

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             V+ +      ++   R+L    + +   
Sbjct: 239 PYVVWITLLAWLMDMALRWLHRRWFPWSEE 268


>gi|313623784|gb|EFR93916.1| glycine betaine/carnitine/choline transport system permease protein
           opuCB [Listeria innocua FSL J1-023]
          Length = 218

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 62/141 (43%), Gaps = 8/141 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H+L     +     LSA+++ +        L  +S ++   ++ ++ ++Q++P L  L F
Sbjct: 13  HNLLVQTWQHLFISLSAVILGIAVAVPVGILLTRSPKVANFVIGVVSVLQTVPSLAILAF 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +             L AI A+F   +  +  + +  +  + ++L E  R   ++ WQ
Sbjct: 73  IIPFLGVG--------TLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
               + +P S+  ++  + +S
Sbjct: 125 LIINVEIPNSISVIMAGIRLS 145



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 7/188 (3%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +  +I+   + +PVGI +   P +++ +     +L   P+      ++  +    L
Sbjct: 23  LFISLSAVILGIAVAVPVGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + +       IL N   G      +  E      +T W+    + +P      
Sbjct: 83  ----PAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIINVEIPNSISVI 138

Query: 507 VTGAITAC--GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + G   +     AW A++ S + + G       GL  Y  +    G+ P  +L +++   
Sbjct: 139 MAGIRLSAVYVIAW-ATLASYIGAGGLGXXIFNGLNLYRPDLILGGAIPVTILALVVEFA 197

Query: 565 FVLALNRF 572
                 R 
Sbjct: 198 LGKLEYRL 205


>gi|270262699|ref|ZP_06190970.1| transporter [Serratia odorifera 4Rx13]
 gi|270043383|gb|EFA16476.1| transporter [Serratia odorifera 4Rx13]
          Length = 235

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   L     +  +  + A+ ++++  F        + +   +L+   + M+++P  G 
Sbjct: 12  LNDDGLLILIFQHLVYSVEALFVAVIIAFPVGCYVGHTGKGATLLIGSANAMRALPSFGL 71

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   V+ F  ++   +       I  I  + +  +   +Y  +  I   + + +     S
Sbjct: 72  IILLVILFGPVFESDLAFIVPCLIVLIILA-LPPIMMGVYSGIRAINPAIIDAAIGMGYS 130

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W+    + +P ++  ++  +  S          +  + +G       G+G  I     +
Sbjct: 131 PWKLLLTVEIPCALALILSGIRSSALQIVSTATIAAYVSLG-------GLGRLIIDGRAQ 183

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D   ++     +  +  L D   
Sbjct: 184 NDYPQMVAGAFMVGILALLVDVFF 207



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 84/213 (39%), Gaps = 10/213 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I ++++   + +   ++ L    +   V  + +A II  PVG ++G     ++ +   A 
Sbjct: 2   INWLLDPAHWLNDDGLLILIFQHLVYSVEALFVAVIIAFPVGCYVGHTGKGATLLIGSAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFK 480
            + A P+     L+V        +   ++    +++I      I+  V +G  A      
Sbjct: 62  AMRALPSFGLIILLVILFGPVFESDLAFIVPCLIVLIILALPPIMMGVYSGIRAINPAII 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A     + W+    + +P      ++G  ++     + + ++   S G       GLG
Sbjct: 122 DAAIGMGYSPWKLLLTVEIPCALALILSGIRSSALQIVSTATIAAYVSLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             I +   +  +P++V G  ++    L ++ F 
Sbjct: 175 RLIIDGRAQNDYPQMVAGAFMVGILALLVDVFF 207


>gi|256392271|ref|YP_003113835.1| ABC transporter permease [Catenulispora acidiphila DSM 44928]
 gi|256358497|gb|ACU71994.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 225

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 17/186 (9%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++I  L  F    L    +R G+V+  + ++ +++P         +  + L    +   
Sbjct: 37  AVLIGALIAFPIGLLTGHVKRGGLVVSALANVARALP--------TLGLVVLLVVVMGVK 88

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A +  +    V  +  + Y+ + N+   L + ++   L  WQ  W   VP ++P ++ 
Sbjct: 89  FRAVMIPLVALTVPPILLNTYEGVRNVDPQLTDAAKGMGLRPWQVLWRAEVPAALPLILT 148

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
               +          +     G       G+G ++   +   D    + A   +L V+  
Sbjct: 149 GFQFAAVNAVANTAIAAYSSFG-------GLGRFVIDGLATTDYG--MVAGGAILIVVAA 199

Query: 255 YDQLLF 260
              LLF
Sbjct: 200 ILNLLF 205



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 12/219 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q+ G++     +     +           V  ++I ++I  P+G+  G        +   
Sbjct: 6   QAWGWLTTSANWSGSDGIPTRFLQHFEYSVEAVLIGALIAFPIGLLTGHVKRGGLVVSAL 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A +  A P      L+V  +        + L  L    T   IL N   G         +
Sbjct: 66  ANVARALPTLGLVVLLVVVMGVKFRAVMIPLVAL----TVPPILLNTYEGVRNVDPQLTD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    +  W+      +P   P  +TG   A   A   + ++  +S+G       GLG 
Sbjct: 122 AAKGMGLRPWQVLWRAEVPAALPLILTGFQFAAVNAVANTAIAAYSSFG-------GLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           ++ +      +  +V G  I+      LN   +  L   
Sbjct: 175 FVIDGLATTDYG-MVAGGAILIVVAAILNLLFFAILRRL 212


>gi|221200293|ref|ZP_03573335.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD2M]
 gi|221205972|ref|ZP_03578986.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD2]
 gi|221173984|gb|EEE06417.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD2]
 gi|221179634|gb|EEE12039.1| inner membrane ABC transporter permease protein YehW [Burkholderia
           multivorans CGD2M]
          Length = 263

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  +  I  L          +        V   I+DI Q+ 
Sbjct: 58  PVIYDRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAVTRPFGADFLPVARSIVDIGQTF 117

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V          +I   L  +  +F         S    L ++P D+ E +R
Sbjct: 118 PPVAVLALAVPAVGFGLKPVLIALVLYGLLPVFE--------STIAGLEDVPHDVVEAAR 169

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 170 GMGMSGWQRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 222

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 223 AGLQTSNTAFVLQGGVIVGLLAVLV 247



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +   I ++I +  GI +  RP  +  +   +    +   FP  
Sbjct: 62  DRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAV-TRPFGADFLPVARSIVDIGQTFPPV 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P+D  E A    ++GW
Sbjct: 121 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPHDVVEAARGMGMSGW 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 177 QRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 229

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 230 TAFVLQGGVIVGLLAVLV 247


>gi|161520059|ref|YP_001583486.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353760|ref|YP_001949387.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344109|gb|ABX17194.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337782|dbj|BAG46851.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 263

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  +  I  L          +        V   I+DI Q+ 
Sbjct: 58  PVIYDRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAVTRPFGADFLPVARSIVDIGQTF 117

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V          +I   L  +  +F         S    L ++PRD+ E +R
Sbjct: 118 PPVAVLALAVPAVGFGLKPVLIALVLYGLLPVFE--------STIAGLEDVPRDVIEAAR 169

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 170 GMGMSGWQRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 222

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 223 AGLQTSNTAFVLQGGVIVGLLAVLV 247



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +   I ++I +  GI +  RP  +  +   +    +   FP  
Sbjct: 62  DRASLLDLTLAHLGTVALSSAIGTLIAVAAGIAV-TRPFGADFLPVARSIVDIGQTFPPV 120

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  E A    ++GW
Sbjct: 121 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVIEAARGMGMSGW 176

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 177 QRLMSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 229

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 230 TAFVLQGGVIVGLLAVLV 247


>gi|210135018|ref|YP_002301457.1| osmoprotection protein [Helicobacter pylori P12]
 gi|210132986|gb|ACJ07977.1| osmoprotection protein [Helicobacter pylori P12]
          Length = 516

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 12/210 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           + Y+V  F +   +Y I L       VV+   +  +  + +G+++ +       + P   
Sbjct: 2   VKYLVKEF-HDRFIYFIDLLAQHFIIVVLSGFLVLVFGVLIGVFVFYNSKAREFLLPVVN 60

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L   P+   F L +  +     N  L L L  +      I+ +          +  + A
Sbjct: 61  FLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAA 116

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                     +  +      P  + G   A        ++  +A  G +        A I
Sbjct: 117 IGLGCNPKELFFKVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-I 169

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  +   +V G LI+  F +  ++F+
Sbjct: 170 FRGLNTQNTTLLVAGSLIIALFSVLADKFV 199



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 68/188 (36%), Gaps = 16/188 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +LS  ++ L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 28  VLSGFLV-LVFGVLIGVFVFYNSKAREFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 84

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 85  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFKVRFLLAIPQ 138

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 139 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 191

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 192 SVLADKFV 199


>gi|154494331|ref|ZP_02033651.1| hypothetical protein PARMER_03686 [Parabacteroides merdae ATCC
           43184]
 gi|154085775|gb|EDN84820.1| hypothetical protein PARMER_03686 [Parabacteroides merdae ATCC
           43184]
          Length = 460

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 12/200 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+V+SL F    A   A+  ++R   +L PI++++  IP + +    L   V      
Sbjct: 248 IGAIVLSLPFGIAVAIYMAEIANKRTRDLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 307

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +   V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 308 FDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 367

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 368 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 427

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
             Y  L +LG +     L+ 
Sbjct: 428 AHYEALFLLGAVLFLITLIL 447



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I+++    I V I++           ++P  +LLA  P+ V+         PL+   
Sbjct: 248 IGAIVLSLPFGIAVAIYMAEIANKRTRDLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 307

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                       S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 308 FDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 367

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 368 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 404


>gi|84625216|ref|YP_452588.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84369156|dbj|BAE70314.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 253

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   L A +R    VL 
Sbjct: 71  LPSALQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALTASTRWGRDVLG 130

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  +       +
Sbjct: 131 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTCAGFQAV 182

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 183 PETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 240

Query: 222 LPGIGSYIAL 231
             G+G YI  
Sbjct: 241 QGGVGWYIFQ 250



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 9/230 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L        +  P    +      +  + +I    +   + +  A Q+     +    
Sbjct: 28  PALVAAAAPTPWQAPPWLRKALVLVVLVAVWEIAARVIGDDLMLPSALQTARAFYDGLLS 87

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 88  GELL---RRVGASLRVLAQGYALGVLLAFVLTALTASTRWGRDVLGTLTAMFNPLPAIAL 144

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P   +    ++ + G R+
Sbjct: 145 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTCAGFQAVPETLRMAGRNYGLRGPRY 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              +++P   P  ++G       AW   I +E+           G+G YI
Sbjct: 201 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGVGWYI 248


>gi|310286745|ref|YP_003938003.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
 gi|313139443|ref|ZP_07801636.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|309250681|gb|ADO52429.1| nitrate/sulfonate/taurine transport system, permease protein
           [Bifidobacterium bifidum S17]
 gi|313131953|gb|EFR49570.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 261

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 90/246 (36%), Gaps = 15/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+ P    +   ++V  I     H I +  +         I      L +  + TT   +
Sbjct: 10  RVAPPAVTVGGLLIVWEIAVDAGH-ISQRVLASPSQIAASIVKTWPDLWEATAITTYEAI 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  +I+ +   +       S+ L   + P+L   Q+IP++      +++F          
Sbjct: 69  TGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFG--------F 120

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +    V+ +     + +  +P+  E+V+ +   +     W++ +  +   + 
Sbjct: 121 EPLGKIVIVAVFGVFPVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVF 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +   V +E +   +      G+G ++  A        I  A + ++ +  
Sbjct: 181 GGLRISAAYVFGTAVTAEYLGAMN------GLGIWLQAAFNSFRTPLIFSATIMVVALTA 234

Query: 254 LYDQLL 259
           L   ++
Sbjct: 235 LLLTII 240



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 74/239 (30%), Gaps = 10/239 (4%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
           F ++         L I W   V    I     +    +     +    +     IT +  
Sbjct: 8   FARVAPPAVTVGGLLIVWEIAVDAGHISQRVLASPSQIAASIVKTWPDLWEATAITTYEA 67

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +IA++  + +GI +     +   I P        P     PL +    +  L   +
Sbjct: 68  ITGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFGFEPLGKIV 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++  +F     +      G  A P  +++VA +   T      ++ L         G 
Sbjct: 128 IVAVFGVF----PVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVFGGL 183

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +    +  ++ +E            GLG ++  +      P +    +++      L
Sbjct: 184 RISAAYVFGTAVTAEYLG------AMNGLGIWLQAAFNSFRTPLIFSATIMVVALTALL 236


>gi|294851609|ref|ZP_06792282.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294820198|gb|EFG37197.1| sulfonate/nitrate/taurine transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 258

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  V+  +++ S + I   I +   P     + P      A P     P++   + 
Sbjct: 63  AAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLG 122

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           Y   +  + +++LMIF   + ++     G         + A             I +P  
Sbjct: 123 YGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILGTGRMAILFRIRIPSA 178

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP   +G   A   A   ++V E          + GLG  +  +  +     +   + ++
Sbjct: 179 FPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLLANGRAKVDLMFACLFVL 232

Query: 563 CCFVLALNRFL 573
             F + L+  +
Sbjct: 233 AAFTMLLHGLV 243



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 87/260 (33%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANAKLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGTGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  + LA     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLLANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|213691681|ref|YP_002322267.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213523142|gb|ACJ51889.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457772|dbj|BAJ68393.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 260

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R  P +  ++  + V      L H           +    I    ++L   A+ T    
Sbjct: 8   KRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIET-WNTLGPAAAITGYEG 66

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   + ++ F  +       S        P+L   Q++P++      +++F     GK  
Sbjct: 67  VVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGK-- 124

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +   +
Sbjct: 125 ------IVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQI 178

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
              + +S +  +     +E +          G+G ++  A        I  A + ++ +
Sbjct: 179 YGGIRVSAAYIFATASTAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATIVIILM 231



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             V+  +A+   W  +G++              T +    +     IT +  VV  + A 
Sbjct: 15  IAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAV 74

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
              I +GI +      ++   P        P     PL +    +      + +++  +F
Sbjct: 75  FFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLF 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    + G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 135 ----PIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYGGIRVSAAYIF 190

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    +++      L
Sbjct: 191 ATASTAEYLGARK------GLGIWLQAAYNSFRTPLIFSATIVIILMTCVL 235


>gi|213161337|ref|ZP_03347047.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213428234|ref|ZP_03360984.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
          Length = 389

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|62180750|ref|YP_217167.1| putative ABC-type proline/glycine betaine transport systems,
           permease component [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168242246|ref|ZP_02667178.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168818130|ref|ZP_02830130.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194451668|ref|YP_002046217.1| inner membrane ABC transporter permease YehY [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|200389263|ref|ZP_03215875.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|238912607|ref|ZP_04656444.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|62128383|gb|AAX66086.1| putative ABC-type proline/glycine betaine transport systems,
           permease component [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194409972|gb|ACF70191.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|199606361|gb|EDZ04906.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205338545|gb|EDZ25309.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205345029|gb|EDZ31793.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320086602|emb|CBY96373.1| putative osmoprotectant uptake system permease protein yehY
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|322715225|gb|EFZ06796.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 389

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|322387524|ref|ZP_08061133.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
 gi|321141391|gb|EFX36887.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
          Length = 305

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 243



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 244


>gi|319947269|ref|ZP_08021502.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus australis ATCC 700641]
 gi|319746511|gb|EFV98771.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus australis ATCC 700641]
          Length = 303

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 68  NPSGKEFGALPMILGSFIVTLLSALVATPFAIGAAVFMTEVSPKGARLLQPAIELLVGIP 127

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ +F +F   +  +TF    SL  +PR   E
Sbjct: 128 SVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRAVPRHYRE 186

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 187 ASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 241



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 63/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  ++A+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 74  FGALPMILGSFIVTLLSALVATPFAIGAAVFMTEVSPKGARLLQPAIELLVGIPSVVYGF 133

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 134 IGLQVVVPFVRSIFGGTGFGILSGVFVLFVMILPT---VTFMTTDSLRAVPRHYREASMA 190

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+   ++ L        T  +     A+  ++  ++       + T+
Sbjct: 191 MGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 242


>gi|218509816|ref|ZP_03507694.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease
           protein [Rhizobium etli Brasil 5]
          Length = 209

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 9/187 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +    AF+    +  + L GI+ + +P     +    L+  +L      T    L
Sbjct: 31  RASPALLAGFAFLAAWEL-YVDLSGIKPSILPAPWRILTQGWLNREALISNTWPTLGATL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +SL F FV + L      +   L+PI    Q++P++      V++F          
Sbjct: 90  GGFALSLAFAFVSSILMDFMPFMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL------ 143

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +     + +  ++ Q      RD+ E+  S + S W+ F    +P S+P   
Sbjct: 144 --LPKILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPYFF 201

Query: 194 WNMMMSM 200
             + +S+
Sbjct: 202 AGLRISI 208



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 4/129 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+   +    ++        I + F P +   + P        P     PLVV    +  
Sbjct: 84  TLGATLGGFALSLAFAFVSSILMDFMPFMRRALLPIFIGSQTLPLVAIAPLVVLWFGFGL 143

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L       LL+   T + +L  ++ G  A   D  E+ +S   + WR +R   LP   PY
Sbjct: 144 LPK----ILLVALVTFFPLLVALLQGYEATDRDIAELLNSMKASRWRIFRLARLPSSLPY 199

Query: 506 YVTGAITAC 514
           +  G   + 
Sbjct: 200 FFAGLRISI 208


>gi|332199020|gb|EGJ13101.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA47901]
          Length = 232

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 74/188 (39%), Gaps = 14/188 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +  + P   D   L  ++  T    L  +++ +L   + A L      L  ++ P++
Sbjct: 19  PTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMM 78

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++Q+IP +      V++             L  I  I  +  + +  S+     +  +D
Sbjct: 79  VVIQTIPTIAIAPILVLWLGYGI--------LPKIVLIILTTTFPIIVSILDGFRHCDKD 130

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +  +    R + WQ  W+  +P S+P     + +S+S  +   V SE +          G
Sbjct: 131 MLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGG------FEG 184

Query: 225 IGSYIALA 232
           +G Y+  +
Sbjct: 185 LGVYMIQS 192



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 60  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 115

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 116 IIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 175

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 176 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 203


>gi|331267295|ref|YP_004326925.1| ABC transporter membrane-spanning
           permease-nitrate/sulfonate/bicarbonate transport
           [Streptococcus oralis Uo5]
 gi|326683967|emb|CBZ01585.1| ABC transporter membrane-spanning
           permease-nitrate/sulfonate/bicarbonate transport
           [Streptococcus oralis Uo5]
          Length = 253

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++F  L  + +  +  I    + +  +P  +  +     D   L  ++  T    L
Sbjct: 10  RRHISLFGFLGVLSIWQLAGIFKL-LPKFILPTPLEILQSFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLVLGVLIACIMAVLMDSLAWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    +   WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMQAKPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 62  ATLRVALLGLVLGVLIACIMAVLMDSLAWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 122 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMQAKPWQILWHFKIPVSLP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 178 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|89056244|ref|YP_511695.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88865793|gb|ABD56670.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 268

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 67/241 (27%), Gaps = 10/241 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +           +  L + W   V    +          V      +   ++     T  
Sbjct: 24  QRLANAALPVGTAIALLVIWQIGVRLFDVPTYIAPAPSDVGAVLRDEFPLLMRNFWPTFT 83

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             V   +  ++  I + +             P A  +   P     P++V          
Sbjct: 84  VSVAGFVAGNVAAILIAVAFVHSRLTERAFFPIAVFINTIPILAIAPILVLIFGPG---- 139

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                ++      +  L N++ G  +      E+A     +    +  I LP   P+  +
Sbjct: 140 MTAKVIIAGLICFFPTLVNMVRGLQSVSPQTLELARILSASKSEVFWKIRLPSSLPFLFS 199

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A       +IVSE            GLGA I +ST     P +   V +     + 
Sbjct: 200 ALKIAATTCVIGAIVSEWIG------ADVGLGALIIDSTFNYRSPLLYATVFMSSGLSVL 253

Query: 569 L 569
           L
Sbjct: 254 L 254



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 23  LAFVLVIGI-INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A +++  I + +          P D+  ++     +  L +    T    ++  V   +
Sbjct: 37  IALLVIWQIGVRLFDVPTYIAPAPSDVGAVLRDEFPL--LMRNFWPTFTVSVAGFVAGNV 94

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A     SR       PI   + +IPIL      V+ F      KVI A L   F 
Sbjct: 95  AAILIAVAFVHSRLTERAFFPIAVFINTIPILAIAPILVLIFGPGMTAKVIIAGLICFF- 153

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                      +M + L ++     E++R    S  + FW + +P S+P L   + ++ +
Sbjct: 154 -------PTLVNMVRGLQSVSPQTLELARILSASKSEVFWKIRLPSSLPFLFSALKIAAT 206

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 + SE I          G+G+ I  +        +   +    G+  L 
Sbjct: 207 TCVIGAIVSEWIG------ADVGLGALIIDSTFNYRSPLLYATVFMSSGLSVLL 254


>gi|326790501|ref|YP_004308322.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326541265|gb|ADZ83124.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 249

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 88/226 (38%), Gaps = 14/226 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++  I  + +        P      +   L         + T  R+   +  SL+   V
Sbjct: 20  LVLWQIAYLCIDKEVLIPSPMHTFTKLLEMLTTTVFYLQIAGTFYRVFMGIGSSLILGIV 79

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A LA KS      + P+++ M+S P++  +   +++F          +E   IF  F  
Sbjct: 80  SAYLAYKSLFFRTFIKPMINFMKSTPVMAIIILALLWF---------KSEEVPIFVCFLM 130

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               +  ++   L  + ++L+E+S+ + +  +       +P   P L   M + +   + 
Sbjct: 131 CYPLVYTNILNGLLELSQELKELSKVYEVKAFYYIKECVLPQLRPYLRTAMQLVVGMAFK 190

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            V+A+E++      IP   +G  +  A    +   +   ++ ++ +
Sbjct: 191 VVIAAEVLA-----IPKYAMGYELLDAKIYLETTEVFAWIIVIILL 231



 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  T +RV + I  + I+ I             + I+P    + + P      L +
Sbjct: 55  FYLQIAGTFYRVFMGIGSSLILGIVSAYLAYKSLFFRTFIKPMINFMKSTPVMAIIILAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                     +  + + + F   + +++ N++ G      + KE++  + +  + + +  
Sbjct: 115 LWF------KSEEVPIFVCFLMCYPLVYTNILNGLLELSQELKELSKVYEVKAFYYIKEC 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP + PY  T      G A+   I +EV +     +     G  + ++       EV  
Sbjct: 169 VLPQLRPYLRTAMQLVVGMAFKVVIAAEVLAIPKYAM-----GYELLDAKIYLETTEVFA 223

Query: 558 GVLIMCCFVLALNRFL 573
            ++++          +
Sbjct: 224 WIIVIILLSQFCEYIV 239


>gi|237801428|ref|ZP_04589889.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024287|gb|EGI04344.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 237

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + I  I      L  Y     + +L +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGISTIKQYQDDLLFYLQAHLILVLVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSG 202
           +++ 
Sbjct: 170 ALAI 173



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI- 408
            +   V I +    I +I      Q    +++     +  V+V ++ A ++ IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALS 68

Query: 409 --GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|310828331|ref|YP_003960688.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612]
 gi|308740065|gb|ADO37725.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612]
          Length = 260

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 88/242 (36%), Gaps = 16/242 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------ITMFRV 390
              V  +L I ++  +  +   +   S+       T   V  V+          +T+ RV
Sbjct: 13  PPGVLKLLAILFWIGIWELGASMVGNSLVLPSPWTTLTGVAGVVGEAGFFEDLGMTLIRV 72

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              I ++  +   VG+  G    +   + PF  ++   P      L+   +    +   L
Sbjct: 73  FGGIAVSVALGAVVGMLSGLNRVLYELMLPFVTVVRTLPVVSVSILINLWIKSGWVP--L 130

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            ++ L+ F   W    NV+ G      +  E+A+ +H+   R  + I LP + PY+ +  
Sbjct: 131 MVTFLVCFPITWT---NVVEGIQNTSRNLLEMAALYHVPFKRVLKDIYLPTLKPYFASAL 187

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +   G  W +++ SEV +          +G  +  +        +    LI+      L 
Sbjct: 188 MNVIGMGWRSTVTSEVLANA-----LPSVGMNLYYAKVYLETETLFSWTLIVVICSFTLE 242

Query: 571 RF 572
           + 
Sbjct: 243 KL 244



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 79/205 (38%), Gaps = 12/205 (5%)

Query: 13  RRIFPNIFDLLAFVL---VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           +++ P +  LLA +    +  +   ++        P   +  V   +      +    T 
Sbjct: 10  KKMPPGVLKLLAILFWIGIWELGASMVGNSLVLPSPWTTLTGVAGVVGEAGFFEDLGMTL 69

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +R+   + +S+    V   L+  +R L  +++P + +++++P++       ++       
Sbjct: 70  IRVFGGIAVSVALGAVVGMLSGLNRVLYELMLPFVTVVRTLPVVSVSILINLW------- 122

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             I +    +   F         ++ + + N  R+L E++  + +   +    + +P   
Sbjct: 123 --IKSGWVPLMVTFLVCFPITWTNVVEGIQNTSRNLLEMAALYHVPFKRVLKDIYLPTLK 180

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIV 214
           P     +M  +  GW   V SE++ 
Sbjct: 181 PYFASALMNVIGMGWRSTVTSEVLA 205


>gi|333025304|ref|ZP_08453368.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332745156|gb|EGJ75597.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 247

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 70/188 (37%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +  L  + ++ I L      A LA + + L   ++ +  I+ ++P L   + 
Sbjct: 27  QELMDATVQHVLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTVPSLAMFSL 86

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P +  E +R      W+
Sbjct: 87  LLPVFGL--------SPALVVTGLVLYSLTILVRNILAGLEAVPEEAREAARGMGYGSWR 138

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +     ++   G+GS I   +     
Sbjct: 139 LLWEVELPLALPAVLGGVRIA-------TVSTVALTTVGAIVDYGGLGSLILDGLDTTFK 191

Query: 239 LAILYAML 246
             +L A +
Sbjct: 192 AQVLAASV 199



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   VV + I   + +P+ +       ++  +     +L   P+   F L++       L
Sbjct: 37  VLITVVSVAIGLAVALPLAVLARRYKPLAGPVLGLTTILYTVPSLAMFSLLLPVFG---L 93

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +P L ++ L+++ +   ++ N++AG  A P + +E A       WR    + LP   P  
Sbjct: 94  SPALVVTGLVLY-SLTILVRNILAGLEAVPEEAREAARGMGYGSWRLLWEVELPLALPAV 152

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +  +G       GLG+ I +  +     +V+   ++
Sbjct: 153 LGGVRIATVSTVALTTVGAIVDYG-------GLGSLILDGLDTTFKAQVLAASVL 200


>gi|289675921|ref|ZP_06496811.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|302188818|ref|ZP_07265491.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae 642]
 gi|330937814|gb|EGH41660.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330981889|gb|EGH79992.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 237

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 74/193 (38%), Gaps = 17/193 (8%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPIL 104
             + +  I      L  Y     + ++ +M+ +L+         ++   +G     + I 
Sbjct: 24  HWIGVSTIKQYQDDLLFYLQAHLILVVVSMLAALVVGIPAGIALSRPSMVGRAERFMQIF 83

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+   
Sbjct: 84  NIGNTVPPLAVLAIALGILGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQGS 135

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L+E +    ++  Q  W + +P ++P ++  + ++++       A    ++G        
Sbjct: 136 LKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI--NVGTAPLAFLIGANS----- 188

Query: 225 IGSYIALAIKEQD 237
           +GS I   I   +
Sbjct: 189 LGSLIFPGIALNN 201



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 8/141 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFP 435
           +++     +  VVV ++ A ++ IP GI +            +Q    +    P      
Sbjct: 38  LLFYLQAHLILVVVSMLAALVVGIPAGIALSRPSMVGRAERFMQ-IFNIGNTVPPLAVLA 96

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + +  +              +   +   I+ N   G        KE A    +T  +   
Sbjct: 97  IALGILGIGSG----PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLW 152

Query: 496 YIILPGIFPYYVTGAITACGG 516
            + LP   P  + G   A   
Sbjct: 153 RVELPNAVPIIIGGVRVALAI 173


>gi|15902005|ref|NP_346609.1| ABC transporter, permease protein [Streptococcus pneumoniae TIGR4]
 gi|14973710|gb|AAK76249.1| ABC transporter, permease protein [Streptococcus pneumoniae TIGR4]
          Length = 249

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 16/222 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           R I      LL F+ V+ I  +   L  + +  +P  +  + P   D   L  ++  T  
Sbjct: 2   RSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLR 61

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +++ +L   + A L      L  ++ P++ ++Q+IP +      V++        
Sbjct: 62  VALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--- 118

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P
Sbjct: 119 -----LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 173

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                + +S+S  +   V SE +          G+G Y+  +
Sbjct: 174 YFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 209



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 77  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 132

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 133 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 192

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 193 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 220


>gi|295095968|emb|CBK85058.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 236

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  + + S+M  +LL       L ++   R +   ++ I ++  ++P L  L  
Sbjct: 38  LIYLGQQHLILVFSSMFFALLVGIPSGILLSRPAARGIAEYVMQIFNVGNTLPPLAVLAL 97

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 98  AMVVIGIG--------DKPAIIALFLASLLPIVRNTYAGLCSVPASLLEAANGIGMTKWQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 150 RLRQVEIPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 202

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 203 PTLILGAAATALFALILDTLL 223



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              V  + + +A  + G  +     + V  +I+LG   +  V   +  A ++ IP GI +
Sbjct: 9   LLFVGAIIVVLALLTWGIGLETIKARQV-DLIYLGQQHLILVFSSMFFALLVGIPSGILL 67

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 68  -SRPAARGIAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDK----PAIIALFLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + +P  +P  ++G   A       + ++ 
Sbjct: 123 RNTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNAWPVMLSGIRIATAINVGTAPLAF 182

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +          +  G  I        FP ++LG      F L L+  L
Sbjct: 183 LIG-------ASSYGELIFPGIYLNDFPTLILGAAATALFALILDTLL 223


>gi|194292721|ref|YP_002008628.1| alkanesulfonate transport protein, ABC superfamily, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|193226625|emb|CAQ72576.1| putative alkanesulfonate transport protein, ABC superfamily, inner
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 278

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 15/218 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA +LV  +         +    P D+   +        L    + + LR+     + L 
Sbjct: 40  LALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLA 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  L   + P       +P        V+ ++ L    V   E   +  
Sbjct: 100 GGLALGAAMGLSPTLRDYVYPTFKAFSQVP--------VLGWLPLLMLLVGIDEALKVIL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +    +  + Y+ + ++P    EV+R  RL+ WQ    + +P +   +   +   ++
Sbjct: 152 IAKAAFVPVALNTYKGIGSVPTRYLEVARVLRLTRWQTLSRVVLPAAAAPVWNGVRYGLT 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             W  +V  E++   +      G+G  I    +   L 
Sbjct: 212 HAWLALVVVELLASSE------GLGYMIVYGRQLFQLD 243



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 68/214 (31%), Gaps = 17/214 (7%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVVLIIIASI 399
               +V  VA   AW     +         L  +W          I+  RV     +   
Sbjct: 40  LALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLA 99

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G  +G  P +   + P  +  +  P   + PL++  V            +L+   
Sbjct: 100 GGLALGAAMGLSPTLRDYVYPTFKAFSQVPVLGWLPLLMLLVGI----DEALKVILIAKA 155

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  N   G  + P  + EVA    +T W+    ++LP        G       AW 
Sbjct: 156 AFVPVALNTYKGIGSVPTRYLEVARVLRLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWL 215

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           A +V E+ +       + GLG  I    +     
Sbjct: 216 ALVVVELLA------SSEGLGYMIVYGRQLFQLD 243


>gi|323466566|gb|ADX70253.1| Glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus helveticus
           H10]
          Length = 219

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +L++++I+L+   V   +  K +    VL+ +  ++ S+P   F   ++    
Sbjct: 21  MIEHAQMVLTSLLIALVIAIVLIWVFLKKKNWLNVLIYVFSLLYSVPSYAFFALSI---- 76

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P   +G + A I  +F S+   +  +    + N+  D  EV++   ++  Q F  + 
Sbjct: 77  ---PLTGLGEKSAIIVLVFYSEYV-LLRTFITGIQNVDADYIEVAKGLGMTSKQIFVKVQ 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + ++++        +  I  G       G+G  +   ++   ++ IL+ 
Sbjct: 133 LPLALPAIFSGIQIALASTMAIATIASTISAG-------GLGDLLFEGLQTGRVVPILWG 185

Query: 245 -----MLTMLGVIFL 254
                +LT++G+I L
Sbjct: 186 TILTVVLTIVGIIIL 200



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++IA +I I +      + +  + +     LL + P+  FF L +        +  
Sbjct: 28  VLTSLLIALVIAIVLIWVFLKKKNWLNVLIYVFSLLYSVPSYAFFALSIPLTGLGEKS-- 85

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               ++++F +++ +L   I G      D+ EVA    +T  + +  + LP   P   +G
Sbjct: 86  --AIIVLVFYSEYVLLRTFITGIQNVDADYIEVAKGLGMTSKQIFVKVQLPLALPAIFSG 143

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL---IMCCFV 566
              A       + ++         +   GLG  + E  + G    ++ G +   ++    
Sbjct: 144 IQIALASTMAIATIA-------STISAGGLGDLLFEGLQTGRVVPILWGTILTVVLTIVG 196

Query: 567 LALNRFL 573
           + + + +
Sbjct: 197 IIILKLV 203


>gi|119386873|ref|YP_917928.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377468|gb|ABL72232.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 272

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 97/267 (36%), Gaps = 16/267 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINI--LLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
               + R ++     L    L+  +       +G    T P D +      L      + 
Sbjct: 10  RLARLGRFLWSAWAGLAGLALIGALWQAGHEAYGDFILTAPLDTLAAAARLLHEGRAQEL 69

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            + TT R L+   +  L   +    A  S     +  P+L ++  +P + ++   +++F 
Sbjct: 70  LALTTARALAGFGLCALIGTLAGVAAGYSPATLRLSRPVLTLLLGVPPIAWIVLAMIWFG 129

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  +   ++A   +F   V        + +    R L++++R F     ++F ++ 
Sbjct: 130 PSDMTVAVTILISATPVVFVGAV--------EGVVTRDRGLDDMARVFGAGPLRRFLFVS 181

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                  L   +++++   +   + +E++          GIG  +A A    D+   L  
Sbjct: 182 ARQISAQLFPALILALGSAFKVAIMAELLANAG------GIGGALARARAMLDIAEALAW 235

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +   +  +   + +L RP+     ++R
Sbjct: 236 VSLAVAALIAVEYVLIRPVRAELERWR 262



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 83/259 (32%), Gaps = 23/259 (8%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQS-------------IGYIVNHFTYQDVLYVIWLGC 384
            R+   L   W  +     IG  WQ+             +  +              L  
Sbjct: 12  ARLGRFLWSAWAGLAGLALIGALWQAGHEAYGDFILTAPLDTLAAAARLLHEGRAQELLA 71

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T  R +    + ++I    G+  G+ P      +P   LL   P   +  L +      
Sbjct: 72  LTTARALAGFGLCALIGTLAGVAAGYSPATLRLSRPVLTLLLGVPPIAWIVLAMIWFG-- 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
               ++ +++ ++      +    + G         ++A  F     R + ++    I  
Sbjct: 130 --PSDMTVAVTILISATPVVFVGAVEGVVTRDRGLDDMARVFGAGPLRRFLFVSARQISA 187

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 I A G A+  +I++E+ +         G+G  +A +       E +  V +   
Sbjct: 188 QLFPALILALGSAFKVAIMAELLA------NAGGIGGALARARAMLDIAEALAWVSLAVA 241

Query: 565 FVLALNRFLWHPLYLYGTR 583
            ++A+   L  P+     R
Sbjct: 242 ALIAVEYVLIRPVRAELER 260


>gi|312278354|gb|ADQ63011.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 304

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 12/212 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--VHSLPQYASRTTLRMLSAMVIS 79
           L+ F++ + ++ +   G+    V +  +     + D         A    +      ++S
Sbjct: 33  LIVFIVALILLFVAQKGLATFFVNKVSLVEFLFSGDWSPSEGKFGALPMIIGSFLVTLLS 92

Query: 80  LLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGK 130
            L    +A  AA      S +    L P ++++  IP + +    L   V +   ++ G 
Sbjct: 93  ALIATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGT 152

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G  L+  F +F   +  +TF    +L  +PR   E S +   + WQ  W + +  + P
Sbjct: 153 GFGI-LSGTFVLFVMILPTVTFMTTDALRAVPRHYREASLAMGATRWQTIWRVTLNAAKP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 212 GIFTAVIFGMARAFGEALAVQMVVGNSVVIPT 243



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 63/177 (35%), Gaps = 14/177 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPA 430
             +     + +   +    ++  +IA+   I   I++    P  +  +QP  +LL   P+
Sbjct: 71  PSEGKFGALPMIIGSFLVTLLSALIATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPS 130

Query: 431 NVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            V+         P V        + +    ++  +MI  T   + F       A P  ++
Sbjct: 131 VVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPT---VTFMTTDALRAVPRHYR 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W+    + L    P   T  I     A+  ++  ++     + + T+
Sbjct: 188 EASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGNSVVIPTS 244


>gi|192289378|ref|YP_001989983.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283127|gb|ACE99507.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 283

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 74/216 (34%), Gaps = 13/216 (6%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           GI  + I +I N  +   +   +W   +T++      +I +++ +  GI +G    +S  
Sbjct: 62  GIVLKLIDWIQNDTSIGPLWRQVW---VTIYEAGAGFLIGAVLGVLCGIALGRNHLLSDV 118

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
              + ++  + P  V   + +  +     +      +++ F        N   G      
Sbjct: 119 FSIYIKVANSIPRVVLGSIFIVALGLGAASKIALAVVMVFFVVF----ANAFQGVREADK 174

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +    A     + W+    +++P    + +     + G A   +IV E            
Sbjct: 175 NLIANARILGASPWQVTTSVVIPSALSWILASLHVSFGFALVGAIVGEFLG------ARE 228

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  IA +        V   ++++    L     L
Sbjct: 229 GMGLLIATAQGSFDSNGVFAAMIVIAVVALVAEGLL 264



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 86/224 (38%), Gaps = 17/224 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             ++D +     +  L +    T     +  +I  +   +      ++  L  V    + 
Sbjct: 65  LKLIDWIQNDTSIGPLWRQVWVTIYEAGAGFLIGAVLGVLCGIALGRNHLLSDVFSIYIK 124

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +  SIP +   +  +V        K+  A +   F +F         + +Q +    ++L
Sbjct: 125 VANSIPRVVLGSIFIVALGLGAASKIALAVVMVFFVVFA--------NAFQGVREADKNL 176

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +R    S WQ    + +P ++  ++ ++ +S     F +V +   +VG+ +    G+
Sbjct: 177 IANARILGASPWQVTTSVVIPSALSWILASLHVSFG---FALVGA---IVGEFLGAREGM 230

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
           G  IA A    D   +  AM+ +  V  + + L   L + ++ W
Sbjct: 231 GLLIATAQGSFDSNGVFAAMIVIAVVALVAEGLLTALEKRLLTW 274


>gi|328913443|gb|AEB65039.1| osmoprotectant transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 225

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     +V + +F      + A+  RL   +  + +++Q++P L  L   ++     
Sbjct: 24  RHFLMSAYGVVFAAVFAIPAGIVTARHGRLSGWVFAVANVIQTVPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I A+F   +  +  + +  + NI     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQVLRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T     G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVIAIGITAIGTFFGAGGLGDMIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   LL
Sbjct: 189 IPTALMAVAADLL 201



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A++  IP GI       +S  +   A ++   PA     +++  +         
Sbjct: 30  AYGVVFAAVFAIPAGIVTARHGRLSGWVFAVANVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +   +   IL N   G     + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQVLRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
            TA   A   + +      G       GLG  I   +   +    ++ G +      +A 
Sbjct: 146 RTALVIAIGITAIGTFFGAG-------GLGDMIVRGSNATNGTAIILAGAIPTALMAVAA 198

Query: 570 NRFL 573
           +  +
Sbjct: 199 DLLM 202


>gi|213650028|ref|ZP_03380081.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|289824261|ref|ZP_06543856.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
          Length = 377

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 169 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 228

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 229 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 288

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +   +   
Sbjct: 289 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSS 341

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 342 AIDLVLLGVIPVIALAVVIDALF 364



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 90/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 117 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 176

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 177 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 234

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 235 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 294

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++ + +   G       G GA + +     +   V+
Sbjct: 295 VQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDLVL 347

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 348 LGVIPVIALAVVIDALF 364


>gi|332982739|ref|YP_004464180.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
 gi|332700417|gb|AEE97358.1| binding-protein-dependent transport systems inner membrane
           component [Mahella australiensis 50-1 BON]
          Length = 223

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 68/177 (38%), Gaps = 15/177 (8%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 L  +  +L  +++ I + +Q++P L  L F + +             + +I  +
Sbjct: 40  GVPAGILITRVNKLSSIVIGIANAIQAVPSLALLGFLIPFLGIG--------TVPSIVMV 91

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +  +  + Y  L N+   + E  R   ++  Q    + +P ++P ++  + +S   
Sbjct: 92  FLYSLLPIIKNTYTGLSNVDSAMIEAGRGMGMTDGQLMRMVQLPLALPVIMAGVRISAVT 151

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G      + +I  G       G+G ++   I   +   I+   +  + +  L D  L
Sbjct: 152 GVGLTTLAALIGAG-------GLGQFVYRGISMVNNQMIMAGAIPAMVLALLVDFAL 201



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P GI I     +SS +   A  + A P+      ++  +        +   +++   +
Sbjct: 40  GVPAGILITRVNKLSSIVIGIANAIQAVPSLALLGFLIPFLGIG----TVPSIVMVFLYS 95

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              I+ N   G S   +   E      +T  +  R + LP   P  + G   +       
Sbjct: 96  LLPIIKNTYTGLSNVDSAMIEAGRGMGMTDGQLMRMVQLPLALPVIMAGVRISAVTGVGL 155

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + ++ +   G       GLG ++       +   ++ G +      L ++
Sbjct: 156 TTLAALIGAG-------GLGQFVYRGISMVNNQMIMAGAIPAMVLALLVD 198


>gi|154687503|ref|YP_001422664.1| OpuBD [Bacillus amyloliquefaciens FZB42]
 gi|154353354|gb|ABS75433.1| OpuBD [Bacillus amyloliquefaciens FZB42]
          Length = 225

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     +V + +F      + A+  RL   +  + +++Q++P L  L   ++     
Sbjct: 24  RHFLMSAYGVVFAAVFAIPAGIVTARHGRLAGWVFAVANVIQTVPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I A+F   +  +  + +  + NI     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQILRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   LL
Sbjct: 189 IPTALMAVAADLL 201



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A++  IP GI       ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVVFAAVFAIPAGIVTARHGRLAGWVFAVANVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +   +   IL N   G     + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQILRMVELPLALSVIMAGL 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
            TA   A   + +      G       GLG  I   +   +    ++ G +      +A 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILAGAIPTALMAVAA 198

Query: 570 NRFL 573
           +  +
Sbjct: 199 DLLM 202


>gi|322375175|ref|ZP_08049689.1| ABC transporter, permease protein [Streptococcus sp. C300]
 gi|321280675|gb|EFX57714.1| ABC transporter, permease protein [Streptococcus sp. C300]
          Length = 252

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + V  +  I    + +  +P     +     D   L  ++  T    L
Sbjct: 9   RRHISLLGFLGVLSVWQLAGIFKL-LPKFILPTPFEILQSFVRDREFLWHHSWATLRVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R + WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 61  ATLRVALLGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 120

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 121 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 176

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 177 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|227510656|ref|ZP_03940705.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190308|gb|EEI70375.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 309

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 22/224 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP     + L  + A VIS  F    A        +R   +L P+ +++  IP + +
Sbjct: 82  VGALP-MILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKILQPVTELLVGIPSVVY 140

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V +  N++ G   G  L+  F +F   +  +      SL ++P    + S +
Sbjct: 141 GFIGLSVVVPFVRNVFGGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLA 199

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-------------- 217
              + WQ  W + +  + PG++  ++  M+  +   +A +M++                 
Sbjct: 200 LGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVIGNASLMPHNLISPASTL 259

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           T +   G+G+ +  +++   L ++   +L M  +  L    + R
Sbjct: 260 TSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIGR 303



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 33/241 (13%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKI 418
           G + N  T     +        +    ++ I+A++I  P  I              +  +
Sbjct: 66  GTLWNPGTKTPDGHAAVGALPMILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKIL 125

Query: 419 QPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNV 468
           QP  +LL   P+ V+         P V +      + +    ++  +MI  T   I+   
Sbjct: 126 QPVTELLVGIPSVVYGFIGLSVVVPFVRNVFGGSGFGILSGTFVLFVMILPT---IVSMT 182

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +    + P  +++ + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 183 VDSLKSVPTYYRQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVI 242

Query: 529 WGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                              + T G+G  +  S +  +   + L +L+M      L  F+ 
Sbjct: 243 GNASLMPHNLISPASTLTSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIG 302

Query: 575 H 575
            
Sbjct: 303 R 303


>gi|91976581|ref|YP_569240.1| substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisB5]
 gi|91683037|gb|ABE39339.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisB5]
          Length = 519

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +LP Y        ++A+ + L  +   A LA     L   L+    I+Q+IP L  L 
Sbjct: 13  LANLPDYLGSHVRVSVAALGLGLAVSLPLAILARHRPVLRGALLGFAGIVQTIPGLALLA 72

Query: 118 FTVVYFMNLYPGKVI--------GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 + L                 L A+ A+    +  +  +    L  +   L E +
Sbjct: 73  LFYPLLLALAALSASTLGVSFSAFGFLPAVLALALYSMLPVLRNTITGLAGVDPALIEAA 132

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +   ++  Q    + +P ++P ++  +  S    W    A+    +G T      +G+YI
Sbjct: 133 QGVGMTPRQTLTMVELPLALPVIMAGIRTS--AVWVIGTATLSTPIGQTS-----LGNYI 185

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              ++ Q+ + +L+       +    DQLL
Sbjct: 186 FAGLQTQNWVLVLFGCAAAAVLALAVDQLL 215



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 20/205 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLII-IASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           + +   + + L  +     +  RV V  + +   + +P+ I    RP +   +  FA ++
Sbjct: 3   VFSDPRWTEALANLPDYLGSHVRVSVAALGLGLAVSLPLAILARHRPVLRGALLGFAGIV 62

Query: 426 AAFPANVFFPLVVSCV------------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
              P      L    +              +     L   L +   +   +L N I G +
Sbjct: 63  QTIPGLALLALFYPLLLALAALSASTLGVSFSAFGFLPAVLALALYSMLPVLRNTITGLA 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    + LP   P  + G  T+    W     +     G   
Sbjct: 123 GVDPALIEAAQGVGMTPRQTLTMVELPLALPVIMAGIRTSA--VWVIGTATLSTPIGQTS 180

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLG 558
                LG YI    +  ++  V+ G
Sbjct: 181 -----LGNYIFAGLQTQNWVLVLFG 200


>gi|297566507|ref|YP_003685479.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
 gi|296850956|gb|ADH63971.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
          Length = 306

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 69/195 (35%), Gaps = 14/195 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V  ++   + +   + +     +   + P+A   ++ P     P++V  V     +  +
Sbjct: 117 LVGYLVGCSLGVATALLVSRFIFLERGLLPYATAFSSIPIVALAPVLVKMVGLEWPSKAI 176

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++ + F     ++ N   G +       ++  S+  +  + +  + +P   P+     
Sbjct: 177 IVAITVFF----PVVVNTFRGLTEVSPLSLDLMRSYAASEAQQYLSLRIPNALPFIFNAL 232

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A   +IV E    G       GLG  I     +  F  V   +++     +   
Sbjct: 233 KLGTTLAMIGAIVGEFFGAGGQ-----GLGFRIQIEAGRFGFDIVWAAIIVASLVGI--- 284

Query: 571 RFLWHPLYLYGTRCL 585
             LW+ L  +  R +
Sbjct: 285 --LWYNLVAWLERKI 297



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 61  LPQYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           L Q A +T +   L   ++        A L ++   L   L+P      SIPI+      
Sbjct: 104 LLQDAFQTVVQEALVGYLVGCSLGVATALLVSRFIFLERGLLPYATAFSSIPIVALAPVL 163

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V      +P K I   +   F         +  + ++ L  +     ++ RS+  S  Q+
Sbjct: 164 VKMVGLEWPSKAIIVAITVFF--------PVVVNTFRGLTEVSPLSLDLMRSYAASEAQQ 215

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +  L +P ++P +   + +  +      +  E    G       G+G  I +        
Sbjct: 216 YLSLRIPNALPFIFNALKLGTTLAMIGAIVGEFFGAGGQ-----GLGFRIQIEAGRFGFD 270

Query: 240 AILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
            +  A++    V  L+  L   L R +  W   FR
Sbjct: 271 IVWAAIIVASLVGILWYNLVAWLERKITSWHVSFR 305


>gi|116696160|ref|YP_841736.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530659|emb|CAJ97006.1| ABC-type transporter, permease component: TauT family [Ralstonia
           eutropha H16]
          Length = 278

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 15/218 (6%)

Query: 23  LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LA +LV  +         +    P D+   +        L    + + LR+     + L 
Sbjct: 40  LALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLA 99

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  L   + P       +P        V+ ++ L    V   E   +  
Sbjct: 100 GGLALGAAMGLSPTLRDYVYPTFKAFSQVP--------VLGWLPLLMLLVGIDEALKVIL 151

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +    +  + Y+ + ++P    EV+R  +L+ WQ    + +P +   +   +   ++
Sbjct: 152 IAKAAFVPVALNTYKGIGSVPTRYLEVARVLQLTRWQTLSRVVLPAAAAPVWNGVRYGLT 211

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             W  +V  E++   +      G+G  I    +   L 
Sbjct: 212 HAWLALVVVELLASSE------GLGYMIVYGRQLFQLD 243



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 68/214 (31%), Gaps = 17/214 (7%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVVLIIIASI 399
               +V  VA   AW     +         L  +W          I+  RV     +   
Sbjct: 40  LALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLA 99

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
             + +G  +G  P +   + P  +  +  P   + PL++  V            +L+   
Sbjct: 100 GGLALGAAMGLSPTLRDYVYPTFKAFSQVPVLGWLPLLMLLVGI----DEALKVILIAKA 155

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +  N   G  + P  + EVA    +T W+    ++LP        G       AW 
Sbjct: 156 AFVPVALNTYKGIGSVPTRYLEVARVLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWL 215

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           A +V E+ +       + GLG  I    +     
Sbjct: 216 ALVVVELLA------SSEGLGYMIVYGRQLFQLD 243


>gi|152967056|ref|YP_001362840.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151361573|gb|ABS04576.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 253

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 76/235 (32%), Gaps = 14/235 (5%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV------IWLGCITMFRVV 391
               + L      VV G+      +   Y++         +V      +     T+   +
Sbjct: 4   AHPRFWLPTVLALVVAGLLWTWVARDNPYVLPTLPSVGRQFVENPDLYLANAATTLQEAL 63

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V + + +++ + V + +     +     P A +L+  P     P +V    +        
Sbjct: 64  VGLALGTLVAVLVAVLVAESALLWRATMPLAVILSVTPVVAIAPALVVAFGFG----MTP 119

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             ++    T + +L N + G  +      +V  +   +       +  P   PY  +   
Sbjct: 120 KYVVTGLITFFPVLMNTVTGLRSVDRHVLQVFRTVDASRAEVLLRLRFPSALPYLFSALR 179

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                +   +IV+E ++ G      +GLG  I+ ++       V   +  +    
Sbjct: 180 VVFPLSLVGAIVAEFSASGAQ----SGLGTLISVASSNSQLDRVFAAIACLAAMG 230



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 20/254 (7%)

Query: 23  LAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMV 77
                V+ ++   LL        P  +  +  +      +       A+ T    L  + 
Sbjct: 8   FWLPTVLALVVAGLLWTWVARDNPYVLPTLPSVGRQFVENPDLYLANAATTLQEALVGLA 67

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  L   + A L A+S  L    +P+  I+   P++      VV F      K +   L 
Sbjct: 68  LGTLVAVLVAVLVAESALLWRATMPLAVILSVTPVVAIAPALVVAFGFGMTPKYVVTGLI 127

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F         +  +    L ++ R + +V R+   S  +    L  P ++P L   + 
Sbjct: 128 TFF--------PVLMNTVTGLRSVDRHVLQVFRTVDASRAEVLLRLRFPSALPYLFSALR 179

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFL 254
           +         + +E    G       G+G+ I++A     L  +  A+     M  ++ L
Sbjct: 180 VVFPLSLVGAIVAEFSASGAQS----GLGTLISVASSNSQLDRVFAAIACLAAMGSLLLL 235

Query: 255 YDQLLFRPMIVWSN 268
               + R  + W  
Sbjct: 236 LVTTVERRALSWHE 249


>gi|288957390|ref|YP_003447731.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288909698|dbj|BAI71187.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 287

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               +L  +A  T    L+ + + L+   + A     +R L   L+P +   Q++PIL  
Sbjct: 79  TSPRNLLFHAWVTAEAALTGLAMGLVLGILLAAGIVHTRTLEASLLPWVIASQTVPILAI 138

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               VV   N+    ++   +  ++  F    + +T  M + L +      ++ R++  S
Sbjct: 139 APMIVVILGNVGLTGLLPKAVICMYLCF----FPITVGMVKGLRSADPLWLDLMRTYSAS 194

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G + FW L +P SMP L  ++ +S++      +  E+   G       G+G+ +      
Sbjct: 195 GLRAFWSLRLPASMPFLFASLKVSVAISVVGAIVGELPTGGQA-----GLGARLLSGSYY 249

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              + I  A++    +      ++
Sbjct: 250 GQTVQIWAALIMASLLSVALIAVV 273



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 79/210 (37%), Gaps = 5/210 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   +  +       +++   +T    +  + +  ++ I +   I     + + + P+  
Sbjct: 69  LWSSLTGYAPTSPRNLLFHAWVTAEAALTGLAMGLVLGILLAAGIVHTRTLEASLLPWVI 128

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P++V  +    L   L  +++ ++   + I   ++ G  +    + ++ 
Sbjct: 129 ASQTVPILAIAPMIVVILGNVGLTGLLPKAVICMYLCFFPITVGMVKGLRSADPLWLDLM 188

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +G R +  + LP   P+       +   +   +IV E+ + G       GLGA +
Sbjct: 189 RTYSASGLRAFWSLRLPASMPFLFASLKVSVAISVVGAIVGELPTGGQ-----AGLGARL 243

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +  G   ++   +++     +AL   +
Sbjct: 244 LSGSYYGQTVQIWAALIMASLLSVALIAVV 273


>gi|161618192|ref|YP_001592079.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260567158|ref|ZP_05837628.1| ABC transporter [Brucella suis bv. 4 str. 40]
 gi|161335003|gb|ABX61308.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260156676|gb|EEW91756.1| ABC transporter [Brucella suis bv. 4 str. 40]
          Length = 258

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V   +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVPGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRRTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    I +P  FP   +G   A   A   ++V E          + GLG  +  + 
Sbjct: 164 AGRMAILFRIRIPSAFPALASGLSLAAVYAPIGAVVGEWVG------ASRGLGYLMLFAN 217

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +   + ++  F + L+  +
Sbjct: 218 GRAKVDLMFACLFVLAAFTMLLHGLV 243



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 85/260 (32%), Gaps = 18/260 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  PGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRRTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++       V A    VVG+ V    G+G  +  A     +  +   +  +    
Sbjct: 183 ASGLSLA------AVYAPIGAVVGEWVGASRGLGYLMLFANGRAKVDLMFACLFVLAAFT 236

Query: 253 FLYDQLL---FRPMIVWSNK 269
            L   L+    R +  W  K
Sbjct: 237 MLLHGLVSYFARKLAAWPKK 256


>gi|148984501|ref|ZP_01817789.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923278|gb|EDK74392.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP3-BS71]
          Length = 238

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  + ++ +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTIFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTIFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|159046686|ref|YP_001542354.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157914445|gb|ABV95873.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 525

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 75/550 (13%), Positives = 164/550 (29%), Gaps = 67/550 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
              L+  + +  +   LL        P + +  +    D   + +    T     +  VI
Sbjct: 21  WIGLILILALWELSGRLLVDSFVLASPSETLRYLVE--DWRLMSRALGVTLSNAAAGFVI 78

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
             L   + A +A    R   V+  +  ++  +P++       V+F      +++ A LA 
Sbjct: 79  GNLAAVLLAGIAILWPRSERVVTGLALLVFCLPLVATGPILRVFFGPGSGPQIVLAALAV 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            +      +          L   P    ++ RS+         ++ +  ++P L   + +
Sbjct: 139 YYTTLIPLL--------VGLRAAPDSWFDLVRSYGRGRMAALVHVRLMAALPYLFAGLQI 190

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +    +         +VG+      G+G     AI+  D+  + + + T+   + +   L
Sbjct: 191 AAPAAFL------GAMVGEFTGAERGMGVLTVRAIRALDV-EMTWGLATVATAVAILAYL 243

Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318
                                                  IG  +      L      L  
Sbjct: 244 --------------------------------------AIGAVARRVL--LEAPPVILAA 263

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                R     +   + +     +   I+ F +    A G    +   I      Q    
Sbjct: 264 PAASGRSRPALDAGLVVALALAGWAGAIWLFGLNPFFAKGPLDVAEALIWAADAPQTRAT 323

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T   ++   +        + I +   P I+    P A  L + P     PL+V
Sbjct: 324 IGAALAETAVFLLPGYLAGLAAGAGLAILLVLVPAIAGTAMPLAIALRSVPIVTTAPLIV 383

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    +     +++++ F +    L     G    P    +V  S+          + 
Sbjct: 384 LLLGRGAVGTITLVAVMVFFPSFVACL----HGLRQAPGQVMDVFDSYAAGPVARLMRVR 439

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P +   A  A   +  A  V E  + G       G+G+ +A S     +  +   
Sbjct: 440 IPAMLPAFFAAARMAVPASVLAVTVVEWLATG------AGIGSLMALSASLSDYDMLWSS 493

Query: 559 VLIMCCFVLA 568
           V+++      
Sbjct: 494 VVLVSALSAL 503



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 11/257 (4%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           T    R    +N         +  + ++    +V    +    +++ Y+V     +D   
Sbjct: 6   TAPRARAGRGQNRGTWIGLILILALWELSGRLLVDSFVLASPSETLRYLV-----EDWRL 60

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     +T+       +I ++  + +       P     +   A L+   P     P++ 
Sbjct: 61  MSRALGVTLSNAAAGFVIGNLAAVLLAGIAILWPRSERVVTGLALLVFCLPLVATGPILR 120

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      +  +L + + T   +L     G  A P+ + ++  S+         ++ 
Sbjct: 121 VFFGPGSGPQIVLAALAVYYTTLIPLL----VGLRAAPDSWFDLVRSYGRGRMAALVHVR 176

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGLGAYIAESTEKGSFPEVV 556
           L    PY   G   A   A+  ++V E      G   L    + A   E T   +     
Sbjct: 177 LMAALPYLFAGLQIAAPAAFLGAMVGEFTGAERGMGVLTVRAIRALDVEMTWGLATVATA 236

Query: 557 LGVLIMCCFVLALNRFL 573
           + +L          R L
Sbjct: 237 VAILAYLAIGAVARRVL 253


>gi|91772527|ref|YP_565219.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Methanococcoides burtonii DSM 6242]
 gi|91711542|gb|ABE51469.1| Glycine betaine/carnitine/choline transport system permease protein
           [Methanococcoides burtonii DSM 6242]
          Length = 203

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           ++  + +   + ++  ++IS+  +   A  +  ++R G V++   ++ Q++P    +   
Sbjct: 6   TILSHTADHLVLVVLTLIISICISMPLAFGSLYNKRFGYVVIKFANLAQAVPSFAVVAIV 65

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V      +          A+ AI    +  +  + Y  L  +   + + +    L+ WQ 
Sbjct: 66  VPLMGIGF--------YPAVVAILLRALLPIIKNTYIGLSTVDPSMLDYADGIGLNEWQI 117

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             Y+ +P + P +   +        F  +    I +    I   G+G  I   +   +  
Sbjct: 118 LRYVRLPNAYPAIFAGIK-------FAFILINSIAILTAYIGSGGLGELIFQGLVAFNNE 170

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
            IL   +  + +   +D +  R     + ++R
Sbjct: 171 KILAGAIPAILIAIAFDIIFTRIEKKLTPQYR 202



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 11/189 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  VV+ +II+  I +P+     +       +  FA L  A P+     +VV  +     
Sbjct: 15  LVLVVLTLIISICISMPLAFGSLYNKRFGYVVIKFANLAQAVPSFAVVAIVVPLMGIGF- 73

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  + ++      I+ N   G S       + A    +  W+  RY+ LP  +P  
Sbjct: 74  ---YPAVVAILLRALLPIIKNTYIGLSTVDPSMLDYADGIGLNEWQILRYVRLPNAYPAI 130

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A     + +I++     G       GLG  I +     +  +++ G +      
Sbjct: 131 FAGIKFAFILINSIAILTAYIGSG-------GLGELIFQGLVAFNNEKILAGAIPAILIA 183

Query: 567 LALNRFLWH 575
           +A +     
Sbjct: 184 IAFDIIFTR 192


>gi|323485563|ref|ZP_08090909.1| hypothetical protein HMPREF9474_02660 [Clostridium symbiosum
           WAL-14163]
 gi|323401211|gb|EGA93563.1| hypothetical protein HMPREF9474_02660 [Clostridium symbiosum
           WAL-14163]
          Length = 264

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 14/194 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T +  L +  + +    + A L   S+ L  +L P L ++ S+P        +V+ 
Sbjct: 74  HTGVTIMETLVSFFLVVTIGLLGAILLWSSKSLSDILEPYLVMLNSLPKSALAPILIVWL 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N     ++ A   A+F    +        ++        D  ++  S           +
Sbjct: 134 GNNIKTIIVAAVSVAVFGAIMT--------LHNGFSRTDPDQIKLIYSLGGKRKDVLTKV 185

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ NM +++      V+  E +          G+G  I    +   +  ++ 
Sbjct: 186 LLPGSIPLIISNMKVNVGLCLVGVIIGEFLAANK------GLGYLIIYGSQVFKMDMVVM 239

Query: 244 AMLTMLGVIFLYDQ 257
           +++ +  V  +  Q
Sbjct: 240 SIVILCIVSAVLYQ 253



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 12/194 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   +V   +   I +   I +     +S  ++P+  +L + P +   P+
Sbjct: 69  GSIFLHTGVTIMETLVSFFLVVTIGLLGAILLWSSKSLSDILEPYLVMLNSLPKSALAPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWR 495
           ++  +        +    + +FG         +  G S    D  ++  S          
Sbjct: 129 LIVWLGNNIKTIIVAAVSVAVFGA-----IMTLHNGFSRTDPDQIKLIYSLGGKRKDVLT 183

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LPG  P  ++      G      I+ E  +         GLG  I   ++      V
Sbjct: 184 KVLLPGSIPLIISNMKVNVGLCLVGVIIGEFLA------ANKGLGYLIIYGSQVFKMDMV 237

Query: 556 VLGVLIMCCFVLAL 569
           V+ ++I+C     L
Sbjct: 238 VMSIVILCIVSAVL 251


>gi|260598007|ref|YP_003210578.1| putative osmoprotectant uptake system permease yehW [Cronobacter
           turicensis z3032]
 gi|260217184|emb|CBA31037.1| Putative osmoprotectant uptake system permease protein yehW
           [Cronobacter turicensis z3032]
          Length = 210

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDI 106
           +    I      L     +  + + S+M ++L        L ++   RR     + I ++
Sbjct: 1   MGPQTIAARREDLLYLGKQHLILVFSSMALALAVGIPSGILLSRPAARRFAEYAMQIFNV 60

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
             ++P L  L   +V             +  AI A+F + +  +  + Y  LC++P  L 
Sbjct: 61  GNTLPPLAVLALAMVVVGIG--------DKPAIVALFLASLLPIVRNTYAGLCSVPGSLI 112

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +    ++  Q+ W + +P + P ++  + ++         A    ++G +       G
Sbjct: 113 EAANGIGMTKGQRLWQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSF-----G 165

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             I   I   D   ++           + D  L
Sbjct: 166 ELIFPGIYLNDFPTLILGAAATALFALILDMAL 198



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +++LG   +  V   + +A  + IP GI +  RP      +   Q+       P      
Sbjct: 13  LLYLGKQHLILVFSSMALALAVGIPSGILL-SRPAARRFAEYAMQIFNVGNTLPPLAVLA 71

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  V            + +   +   I+ N  AG  + P    E A+   +T  +   
Sbjct: 72  LAMVVVGIGDK----PAIVALFLASLLPIVRNTYAGLCSVPGSLIEAANGIGMTKGQRLW 127

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  ++G   A       + ++         +  +  G  I        FP +
Sbjct: 128 QVELPNAWPVMLSGIRIATAINVGTAPLA-------FLIGASSFGELIFPGIYLNDFPTL 180

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LG      F L L+  L
Sbjct: 181 ILGAAATALFALILDMAL 198


>gi|330895479|gb|EGH27791.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 210

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 89/227 (39%), Gaps = 27/227 (11%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + +  I      L  Y     + ++ +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGVSTIKQYQDDLLFYLQAHLILVVVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +++       A    ++G        +GS I   I   +   +++A 
Sbjct: 170 ALAI--NVGTAPLAFLIGANS-----LGSLIFPGIALNNQPQLVFAA 209



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 15/214 (7%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI- 408
            +   V I +    I +I      Q    +++     +  VVV ++ A ++ IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGVSTIKQYQDDLLFYLQAHLILVVVSMLAALVVGIPAGIALS 68

Query: 409 --GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G        KE A    +T  +    + LP   P  + G   A       + ++ +
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAINVGTAPLAFL 183

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                       LG+ I       + P++V    
Sbjct: 184 IG-------ANSLGSLIFPGIALNNQPQLVFAAA 210


>gi|304395788|ref|ZP_07377671.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357082|gb|EFM21446.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 391

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 16/213 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            SR    ++  ++ +L+F         +       +  +L+++Q++P +      +    
Sbjct: 184 LSRHLTLLVGTILPALMFALPLGVTLFRRPDWQGSVFGVLNVIQTVPSVALFGLLIAPLA 243

Query: 125 NLYP--------GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L          G        A+ A+    +  +  S+   L  +P+++ E +R   +SG
Sbjct: 244 GLAQHFPWLSDWGISGIGMAPALIALVLYALLPLVRSVVVGLQQVPQEVRESARGTGMSG 303

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+F  + VP ++P  +  + + +       V + +I  G       G G+ I   +   
Sbjct: 304 WQQFVAVDVPLALPVWLAGLRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSS 356

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            L  +L  ++ ++ +  + D  LFR +I    +
Sbjct: 357 ALDLVLLGVIPVIALAVVID-ALFRLLISLLER 388



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 77/199 (38%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +V  I+ A +  +P+G+ +  RP     +     ++   P+   F L+++ ++    
Sbjct: 188 LTLLVGTILPALMFALPLGVTLFRRPDWQGSVFGVLNVIQTVPSVALFGLLIAPLAGLAQ 247

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +                  + ++      ++ +V+ G    P + +E A    ++GW+ +
Sbjct: 248 HFPWLSDWGISGIGMAPALIALVLYALLPLVRSVVVGLQQVPQEVRESARGTGMSGWQQF 307

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P ++ G           ++V+ +   G       G GA I +     +   
Sbjct: 308 VAVDVPLALPVWLAGLRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSSALDL 360

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 361 VLLGVIPVIALAVVIDALF 379


>gi|217034135|ref|ZP_03439555.1| hypothetical protein HP9810_868g28 [Helicobacter pylori 98-10]
 gi|216943419|gb|EEC22875.1| hypothetical protein HP9810_868g28 [Helicobacter pylori 98-10]
          Length = 512

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 63/198 (31%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            +Y + L       V +   +  +  + +G+++ +     + + P    L   P+   F 
Sbjct: 9   FIYFVDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFA 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +     N  L L L  +      I+ +          +  + A          + 
Sbjct: 69  LFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKELFF 124

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +      P  + G   A        ++  +A  G +        A I       +   +
Sbjct: 125 RVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLL 177

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G LI+  F +  ++F+
Sbjct: 178 VAGSLIIALFSVLADKFV 195



 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 23  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 80

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 81  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 134

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 135 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 187

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 188 SVLADKFV 195


>gi|22537151|ref|NP_688002.1| phosphate ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|25011080|ref|NP_735475.1| hypothetical protein gbs1026 [Streptococcus agalactiae NEM316]
 gi|76788397|ref|YP_329707.1| phosphate ABC transporter permease [Streptococcus agalactiae A909]
 gi|76797783|ref|ZP_00780049.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae 18RS21]
 gi|77405680|ref|ZP_00782767.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77411994|ref|ZP_00788323.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413610|ref|ZP_00789796.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|22534014|gb|AAM99874.1|AE014237_8 phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23095479|emb|CAD46685.1| unknown [Streptococcus agalactiae NEM316]
 gi|76563454|gb|ABA46038.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae A909]
 gi|76586859|gb|EAO63351.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           agalactiae 18RS21]
 gi|77160319|gb|EAO71444.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77161950|gb|EAO72932.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77175676|gb|EAO78458.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 305

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 25/213 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 86  FIVTILSAIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVGIPSVVYGFIGLQIIVPF 145

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W 
Sbjct: 146 VRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLRAVPRHYKEASLAMGATRWQTIWR 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +  + PG+   ++  M+  +   +A +M+V                 T +   GIG+ 
Sbjct: 205 VILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLTTPAATLTSVLTMGIGNT 264

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   ++   L ++   +L M        +L+ R
Sbjct: 265 VMGTVQNNVLWSLALVLLIMSLAFNTVIKLITR 297



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 39/279 (13%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ--SIGYIVNHFTYQDVLY--- 378
           +   P    +L    +    L +     +  + +    Q     + V+     D L+   
Sbjct: 9   KLTSPSKNSRLEKFGKGITFLSLALIVFIVAMILIFVAQKGLSTFFVDGVKLTDFLFNTK 68

Query: 379 ---------VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAA 427
                       +   +    ++  IIA+   I   +++    P   S  +QP  +LL  
Sbjct: 69  WEPSAKSFGAFPMIAGSFIVTILSAIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVG 128

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P+ V+         P V S            + +L +      + F  +    A P  +
Sbjct: 129 IPSVVYGFIGLQIIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLRAVPRHY 187

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-- 537
           KE + +   T W+    +IL    P   T  +     A+  ++  ++       L T+  
Sbjct: 188 KEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLT 247

Query: 538 ------------GLGAYIAESTEKGSFPEVVLGVLIMCC 564
                       G+G  +  + +      + L +LIM  
Sbjct: 248 TPAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSL 286


>gi|239636069|ref|ZP_04677083.1| ABC transporter, permease protein [Staphylococcus warneri L37603]
 gi|239598340|gb|EEQ80823.1| ABC transporter, permease protein [Staphylococcus warneri L37603]
          Length = 211

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +++ +   V++ I  ++Q+IP L  L   +  F           +  AI 
Sbjct: 32  VVAVPLGILLSRTTKTANVVLTIAGVLQTIPTLAVLAIMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ +  +S  ++ +Q    + +P ++P ++  + +S 
Sbjct: 84  ALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTQFQLMKDVQMPLALPMIISGIRLSS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  +  G       G+G  +   +       I+ A + +  +  + D LL
Sbjct: 144 VYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLALIVDFLL 195



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +P+GI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISIIALLIAIVVAVPLGILLSRTTKTANVVLTIAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T ++  + + +P   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTQFQLMKDVQMPLALPMI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYVISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDFLL 195


>gi|114705732|ref|ZP_01438635.1| ABC transporter, permease component [Fulvimarina pelagi HTCC2506]
 gi|114538578|gb|EAU41699.1| ABC transporter, permease component [Fulvimarina pelagi HTCC2506]
          Length = 207

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             TM  + + + I+ ++ I  G+ +G R        P   ++ A P     PLV      
Sbjct: 12  LKTMEPLAIGLTISLVVGIGSGVAMGLRTDAEWLSLPVFIVMQAAPMAALIPLVTFVYGI 71

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L + +L    +   I  N        P     +  SF     +    II+P   
Sbjct: 72  GLTAKVLAVVML----SLPVIAMNSYKAVRNVPPSLVSMCHSFMGNRRQQILQIIIPAAS 127

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P    G        ++ ++++E+       +  TG+G  I       +F  +   ++ + 
Sbjct: 128 PMMFAGLRLGVAEGFSGAVLAELL------ITPTGIGDLITFHRSVANFAHMYATIVAIV 181

Query: 564 CFVLALNRFL 573
            F +     L
Sbjct: 182 LFAIVSVGLL 191



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+     +T   +   + ISL+                 + +P+  +MQ+ P+   +  
Sbjct: 5   GSMGSAFLKTMEPLAIGLTISLVVGIGSGVAMGLRTDAEWLSLPVFIVMQAAPMAALIPL 64

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               +      KV+        A+    +  +  + Y+++ N+P  L  +  SF  +  Q
Sbjct: 65  VTFVYGIGLTAKVL--------AVVMLSLPVIAMNSYKAVRNVPPSLVSMCHSFMGNRRQ 116

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P +   + + ++ G+   V +E++      I   GIG  I       + 
Sbjct: 117 QILQIIIPAASPMMFAGLRLGVAEGFSGAVLAELL------ITPTGIGDLITFHRSVANF 170

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +   ++ ++    +   LL
Sbjct: 171 AHMYATIVAIVLFAIVSVGLL 191


>gi|77410845|ref|ZP_00787202.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77163063|gb|EAO74017.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
          Length = 196

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 68/171 (39%), Gaps = 15/171 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               + +  +++  V++ I  I Q+IP L  L   + +             + A+ A+  
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG--------TVPAVVALII 90

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             ++ +  +   +L  I  +L E + +F ++ W++     +  SMP ++  +  +     
Sbjct: 91  YALFPILQNTVTALMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMII 150

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                + +I  G       G+GS+I L I   +   IL   ++   +  + 
Sbjct: 151 GTATLASLIGAG-------GLGSFILLGIDRNNPSLILIGAISSAVLAIIL 194



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 11/167 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI I     IS  +     +    P+     L +  +        +   + +I    +
Sbjct: 39  PLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIG----TVPAVVALIIYALF 94

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N +        +  E A++F +T W   +   L    P  ++G  TA       + 
Sbjct: 95  PILQNTVTALMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTAT 154

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++ +   G       GLG++I    ++ +   +++G +      + L
Sbjct: 155 LASLIGAG-------GLGSFILLGIDRNNPSLILIGAISSAVLAIIL 194


>gi|220903704|ref|YP_002479016.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868003|gb|ACL48338.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 258

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 10/192 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RV+    +  ++   +G   G  P     + PF  +L++ P  V   L +       
Sbjct: 66  TLGRVLSGFGLGLVVGGALGWAAGICPAAGFMLLPFRWVLSSVPGVVLVILAMLWCGVG- 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  + L++   +   I   +  G  A      E+A ++ I+  + +  + LP +   
Sbjct: 125 ---SAMIILIVALTSIPTIYMALQEGLRAVDPALCEMARAYKISLRKRFTELYLPAVAAP 181

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+  + A GG    +I+ E          + GLG  +A +      P++    L+    
Sbjct: 182 LVSACVVALGGGMRVAILGETLG------ASQGLGYMLALARADLDTPKLYAVALVSMLL 235

Query: 566 VLALNRFLWHPL 577
           V  +       L
Sbjct: 236 VSVIEATFLRCL 247



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 96/240 (40%), Gaps = 15/240 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L F+      ++    +   +       ++ +        Q    T  R+LS   + L
Sbjct: 19  GCLCFLGAWQWASVHAGSLALASPVETWRALMDMAAHPAFWTQGMLPTLGRVLSGFGLGL 78

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        A      G +L+P   ++ S+P +  +   +++        ++   L +I 
Sbjct: 79  VVGGALGWAAGICPAAGFMLLPFRWVLSSVPGVVLVILAMLWCGVGSAMIILIVALTSIP 138

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I+         ++ + L  +   L E++R++++S  ++F  L +P     LV   ++++
Sbjct: 139 TIY--------MALQEGLRAVDPALCEMARAYKISLRKRFTELYLPAVAAPLVSACVVAL 190

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIFLYDQLL 259
            GG    +      +G+T+    G+G  +ALA  + D   +   A+++ML V  +    L
Sbjct: 191 GGGMRVAI------LGETLGASQGLGYMLALARADLDTPKLYAVALVSMLLVSVIEATFL 244


>gi|295095970|emb|CBK85060.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 215

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 84/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ +++        L  + + L   ++ I  I+ +IP +   
Sbjct: 10  NWDYLLTLTLQHLWLVALAVGLAIFIGVPLGILIVRHKWLATPVLGIATIVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 212



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y++ L    ++ V + + +A  I +P+GI I     +++ +   A ++   P
Sbjct: 5   HYILDNWDYLLTLTLQHLWLVALAVGLAIFIGVPLGILIVRHKWLATPVLGIATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|261837952|gb|ACX97718.1| betaine/proline/choline ABC transporter transmembrane component
           [Helicobacter pylori 51]
          Length = 521

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 63/198 (31%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            +Y I L       V +   +  +  + +G+++ +     + + P    L   P+   F 
Sbjct: 18  FIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFA 77

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +     N  L L L  +      I+ +          +  + A          + 
Sbjct: 78  LFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKELFF 133

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +      P  + G   A        ++  +A  G +        A I       +   +
Sbjct: 134 RVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLL 186

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G LI+  F +  ++F+
Sbjct: 187 VAGSLIIALFSVLADKFV 204



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+PI++ + +IP L      +           
Sbjct: 32  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 89

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 90  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 143

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 144 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 196

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 197 SVLADKFV 204


>gi|188575353|ref|YP_001912282.1| permease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519805|gb|ACD57750.1| permease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 239

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                         L    L +    +   +     + +L  FV   L A +R    VL 
Sbjct: 57  LPSALQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALTASTRWGRDVLG 116

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            +  +   +P +  L   +++F             + +F +  S +W +  +       +
Sbjct: 117 TLTAMFNPLPAIALLPLALLWFGLGTG--------SLVFVLVHSVLWPLALTTCAGFQAV 168

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P  L    R++ L G +    L +P ++P ++  + +  +  W  ++A+E++    +   
Sbjct: 169 PETLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATS--G 226

Query: 222 LPGIGSYIAL 231
             G+G YI  
Sbjct: 227 QGGVGWYIFQ 236



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 9/230 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L        +  P    +      +  + +I    +   + +  A Q+     +    
Sbjct: 14  PALVAAAAPTPWQAPPWLRKALVLVVLVAVWEIAARVIGDDLMLPSALQTARAFYDGLLS 73

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            ++L        ++  +     +  ++   +             +     +    PA   
Sbjct: 74  GELL---RRVGASLRVLAQGYALGVLLAFVLTALTASTRWGRDVLGTLTAMFNPLPAIAL 130

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +        +    L  +++    W +     AG  A P   +    ++ + G R+
Sbjct: 131 LPLALLWFGLGTGS----LVFVLVHSVLWPLALTTCAGFQAVPETLRMAGRNYGLRGPRY 186

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              +++P   P  ++G       AW   I +E+           G+G YI
Sbjct: 187 VAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGA--TSGQGGVGWYI 234


>gi|261821942|ref|YP_003260048.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261605955|gb|ACX88441.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 271

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 17/210 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+   + I+ L + ++   A         L P++ ++  IP L  L    + F 
Sbjct: 75  TQASLVRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPILFIVFG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   + Q   NIP+++   +++   + W     + 
Sbjct: 135 LD--------ELSKVMLIVIGVTPMLARDLEQRARNIPQEMLIKAQTLGANSWVVVLRVI 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L+ ++ + +   W F++++E I          G+G  I L  +   +  IL  
Sbjct: 187 LPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPY 240

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           ++ +  + +L D   + L R    WS + +
Sbjct: 241 VVWITLLAWLMDMVLRWLHRRWFPWSEESK 270



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 14/210 (6%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ WL    ++ R+ + + IAS++ +  GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWLDTQASLVRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VMLIVIGVTPMLARDLEQRARNIPQEMLIKAQTLGANSWVVVLR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP +    +       G AW   I +E  S       T GLG  I       +   ++
Sbjct: 185 VILPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVIL 238

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             V+ +      ++   R+L    + +   
Sbjct: 239 PYVVWITLLAWLMDMVLRWLHRRWFPWSEE 268


>gi|311069897|ref|YP_003974820.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
 gi|310870414|gb|ADP33889.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter
           permease [Bacillus atrophaeus 1942]
          Length = 226

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +  ++ + +         A+ R L   +  I +++Q++P L  L   ++     
Sbjct: 24  RHFLMSVYGVLFAAVIGIPTGIFIARYRALSSWIFAITNVIQTVPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I ++F   +  +  + Y  + +I     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMGMTKFQVLRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGLRTA-------LVIAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   L+
Sbjct: 189 IPTALMAVIADLV 201



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 11/206 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  +  Q+  YV+          V  ++ A++I IP GI+I     +SS I     ++  
Sbjct: 7   LGTYYSQNGGYVLHEFYRHFLMSVYGVLFAAVIGIPTGIFIARYRALSSWIFAITNVIQT 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA     +++  +          + L +   +   I+ N   G  +  + + E   +  
Sbjct: 67  VPALAMLAVLMLVMGLGANT----VILSLFLYSLLPIIRNTYTGIVSIEHAYLESGKAMG 122

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T ++  R + LP      + G  TA   A   + +      G       GLG  I   +
Sbjct: 123 MTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAG-------GLGDIIVRGS 175

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              +   ++L   I    +  +   +
Sbjct: 176 NATNGTAIILAGAIPTALMAVIADLV 201


>gi|304395966|ref|ZP_07377848.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304356335|gb|EFM20700.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 215

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  +L   + + +  +L A+ ++++       L  + R L   ++ I  ++ +IP +   
Sbjct: 10  NWSTLLTLSWQHSWLVLVAVGLAIVIGVPLGILIVRVRWLATPILGIATVVLTIPTIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L N+P  L E  R   ++ 
Sbjct: 70  GLMIPVFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G     L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGQLL-------LDGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +    D LL R     + K
Sbjct: 180 DIRMLIAGALMICLLAIFLDWLLHRLQQALTPK 212



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 8/218 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +   ++ L     + V+V + +A +I +P+GI I     +++ I   A ++   P
Sbjct: 5   HYIMDNWSTLLTLSWQHSWLVLVAVGLAIVIGVPLGILIVRVRWLATPILGIATVVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               F L++   S          ++  +   +   I+ N        P+  +E      +
Sbjct: 65  TIALFGLMIPVFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G +            +   
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGQLL-------LDGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 ++ G L++C   + L+  L         + +R
Sbjct: 178 GSDIRMLIAGALMICLLAIFLDWLLHRLQQALTPKGIR 215


>gi|301158726|emb|CBW18238.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|323130490|gb|ADX17920.1| putative ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 389

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|229817209|ref|ZP_04447491.1| hypothetical protein BIFANG_02469 [Bifidobacterium angulatum DSM
           20098]
 gi|229784998|gb|EEP21112.1| hypothetical protein BIFANG_02469 [Bifidobacterium angulatum DSM
           20098]
          Length = 270

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 83/243 (34%), Gaps = 15/243 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR  P +  ++  ++V      L H           +    +     +L      T L  
Sbjct: 18  RRRIPTLVTVVLLLVVWEAWVRLAHVPATMIPSPSEIAQATVETWP-TLWPATRITLLEG 76

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +++++   +   L   SR     L P+L   Q++P++      +++F     GK  
Sbjct: 77  SVGFLLAVMLGILIGILLYCSRIANAALFPLLSAAQTMPLISIAPLFLIWFGFEISGK-- 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I  +    ++ +     + L  +P    +V+ +   +     W++ +  +   +
Sbjct: 135 ------IVIVAIFGLFPIAVQTIRGLEAVPTFYSDVALTCGATRTWTLWHVKLRVAARQI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +  +     +E +          G+G ++  A        I  A L ++ + 
Sbjct: 189 YGGIRVSAAYIYATAATAEYLG------ARGGLGIWLQAAYNSFRTPLIFSATLVIIAIT 242

Query: 253 FLY 255
            + 
Sbjct: 243 GIL 245



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 76/251 (30%), Gaps = 10/251 (3%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
            +   R    + F +         +L + W   V    +          +   T +    
Sbjct: 5   HVRNTRGTLIKMFRRRIPTLVTVVLLLVVWEAWVRLAHVPATMIPSPSEIAQATVETWPT 64

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +     IT+    V  ++A ++ I +GI +      ++ + P        P     PL +
Sbjct: 65  LWPATRITLLEGSVGFLLAVMLGILIGILLYCSRIANAALFPLLSAAQTMPLISIAPLFL 124

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +      + +++  +F     I    I G  A P  + +VA +   T      ++ 
Sbjct: 125 IWFGFEISGKIVIVAIFGLF----PIAVQTIRGLEAVPTFYSDVALTCGATRTWTLWHVK 180

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           L         G   +    +  +  +E            GLG ++  +      P +   
Sbjct: 181 LRVAARQIYGGIRVSAAYIYATAATAEYLG------ARGGLGIWLQAAYNSFRTPLIFSA 234

Query: 559 VLIMCCFVLAL 569
            L++      L
Sbjct: 235 TLVIIAITGIL 245


>gi|161613148|ref|YP_001587113.1| hypothetical protein SPAB_00856 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362512|gb|ABX66280.1| hypothetical protein SPAB_00856 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 389

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|16765494|ref|NP_461109.1| ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167991087|ref|ZP_02572186.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|16420700|gb|AAL21068.1| putative ABC-type proline/glycine betaine transport system,
           permease component [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205330439|gb|EDZ17203.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|261247378|emb|CBG25203.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267994226|gb|ACY89111.1| putative ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|312913155|dbj|BAJ37129.1| hypothetical protein STMDT12_C21860 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224816|gb|EFX49879.1| Osmoprotectant ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322615192|gb|EFY12114.1| hypothetical protein SEEM315_00300 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322617783|gb|EFY14679.1| hypothetical protein SEEM971_13755 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624623|gb|EFY21454.1| hypothetical protein SEEM973_15259 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626926|gb|EFY23722.1| hypothetical protein SEEM974_10720 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634112|gb|EFY30848.1| hypothetical protein SEEM201_06221 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635697|gb|EFY32407.1| hypothetical protein SEEM202_16729 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640168|gb|EFY36832.1| hypothetical protein SEEM954_04997 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646409|gb|EFY42921.1| hypothetical protein SEEM054_09790 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649377|gb|EFY45813.1| hypothetical protein SEEM675_08705 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656497|gb|EFY52786.1| hypothetical protein SEEM965_08582 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661473|gb|EFY57697.1| hypothetical protein SEEM19N_04779 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665639|gb|EFY61823.1| hypothetical protein SEEM801_13760 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667163|gb|EFY63330.1| hypothetical protein SEEM507_08880 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671169|gb|EFY67297.1| hypothetical protein SEEM877_07547 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675190|gb|EFY71267.1| hypothetical protein SEEM867_05527 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680799|gb|EFY76834.1| hypothetical protein SEEM180_14822 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686974|gb|EFY82951.1| hypothetical protein SEEM600_00715 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192738|gb|EFZ77965.1| hypothetical protein SEEM581_11936 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198830|gb|EFZ83929.1| hypothetical protein SEEM501_01950 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323205160|gb|EFZ90138.1| hypothetical protein SEEM460_14206 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208203|gb|EFZ93147.1| hypothetical protein SEEM020_21707 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210987|gb|EFZ95848.1| hypothetical protein SEEM6152_22962 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215772|gb|EGA00515.1| hypothetical protein SEEM0077_09522 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323231217|gb|EGA15332.1| hypothetical protein SEEM0052_15597 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233652|gb|EGA17744.1| hypothetical protein SEEM3312_00832 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237722|gb|EGA21782.1| hypothetical protein SEEM5258_18125 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245705|gb|EGA29699.1| hypothetical protein SEEM1156_11090 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248931|gb|EGA32855.1| hypothetical protein SEEM9199_04748 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252998|gb|EGA36831.1| hypothetical protein SEEM8282_01039 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258674|gb|EGA42336.1| hypothetical protein SEEM8283_21010 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259506|gb|EGA43141.1| hypothetical protein SEEM8284_19075 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268289|gb|EGA51764.1| hypothetical protein SEEM8285_09703 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271921|gb|EGA55337.1| hypothetical protein SEEM8287_20354 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332989098|gb|AEF08081.1| putative ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 389

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|319638228|ref|ZP_07992991.1| glycine betaine [Neisseria mucosa C102]
 gi|317400501|gb|EFV81159.1| glycine betaine [Neisseria mucosa C102]
          Length = 505

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L A  +R    ++   +I+Q+IP L  L   + +     P  +I   L A+  IF     
Sbjct: 40  LFAHRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ---- 95

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
               + Y  L  I + +++   +F LS  Q  W + +P ++P ++  +  +
Sbjct: 96  ----NTYLGLTQIDQSIQDAYTAFGLSRCQSLWRIELPMALPAMISGIRTA 142



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           R   +  +  F  +L   P+     L++  V        + L+L  +      I  N   
Sbjct: 44  RQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQNTYL 99

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           G +      ++  ++F ++  +    I LP   P  ++G  TA       + ++ +  
Sbjct: 100 GLTQIDQSIQDAYTAFGLSRCQSLWRIELPMALPAMISGIRTAAVLIVGTATLAALIG 157


>gi|298484081|ref|ZP_07002249.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           D22]
 gi|295087666|emb|CBK69189.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Bacteroides xylanisolvens XB1A]
 gi|298269762|gb|EFI11355.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           D22]
          Length = 398

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|227890360|ref|ZP_04008165.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849174|gb|EEJ59260.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 330

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A  AA       S++    L  +++++  IP + +    LT  V +
Sbjct: 115 FSVTLLAALVATPFAIAAALFMTEYSSKKGARFLQSVIELLVGIPSVVYGFLGLTVIVPF 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 175 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 233

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 234 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 267



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 64/188 (34%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I              + 
Sbjct: 87  VFQFLTSSDWDPGEGKNHVGAAAMIVTSFSVTLLAALVATPFAIAAALFMTEYSSKKGAR 146

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+  L ++ +       +      +  + L++F      + +  +
Sbjct: 147 FLQSVIELLVGIPSVVYGFLGLTVIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 207 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 266

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 267 NAVLMPAN 274


>gi|237732178|ref|ZP_04562659.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907717|gb|EEH93635.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 388

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    + + +V +LL         A S      +  +L+I+Q+IP +      +    
Sbjct: 180 LAQHLTILFATVVPALLIGVPLGIWCAFSVSRQGPVFAVLNIIQTIPSVALFGLLIAPLA 239

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     +   L         A+ A+    +  +   +   L  +P+D+ E +R+  ++ 
Sbjct: 240 GLVKHFPLLGSLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPQDVLESARAMGMNT 299

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q+F  +  P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 300 FQRFVSVQFPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 352

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 353 AVDLVLLGVIPVVVLAVLIDALF 375



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 92/272 (33%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                 LG++     +   ++       ++L    F     +     +  +  +  +   
Sbjct: 113 SGFWLGLGLMLLAASDAIRRITELASWRWLLHAQMFIFPLVLLFSGTFNDLSLLKEYANR 172

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QDV        +T+      ++ A +I +P+GIW  F       +     ++   P+   
Sbjct: 173 QDVFNDALAQHLTIL--FATVVPALLIGVPLGIWCAFSVSRQGPVFAVLNIIQTIPSVAL 230

Query: 434 FPLVVSCVSYY------------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + ++      ++  V+AG +  P D  E
Sbjct: 231 FGLLIAPLAGLVKHFPLLGSLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPQDVLE 290

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +  ++ +  +  P   P ++             ++++ +   G       G GA
Sbjct: 291 SARAMGMNTFQRFVSVQFPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGA 343

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    + ++   
Sbjct: 344 LVFQGLLSSAVDLVLLGVIPVVVLAVLIDALF 375


>gi|219668828|ref|YP_002459263.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219539088|gb|ACL20827.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 218

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 15/196 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           I+ + +    L     +    +  +M+I++        L  + + L   ++ +  I+Q+I
Sbjct: 11  ILQLEMRWPDLTAALLQHIELVFISMLIAITIGVPLGILITRVKALEGPVLGVAGILQTI 70

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L F +  F              A+ A+F   +  +  + +  + ++ +   E ++
Sbjct: 71  PGLALLGFMIPLFGIGI--------KTAVAALFLYSLLPIIRNTFTGIKDVDKATIEAAK 122

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++ WQ    + +P ++  ++  +  +          +  I  G       G+G +I 
Sbjct: 123 GMGMTDWQILTKVQLPLALSVMMAGIRTATVINVGTATLAAFIGAG-------GLGDFIF 175

Query: 231 LAIKEQDLLAILYAML 246
           + I       +L    
Sbjct: 176 IGISRNLDALVLIGAF 191



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 11/154 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + ++IA  I +P+GI I     +   +   A +L   P       ++           
Sbjct: 32  VFISMLIAITIGVPLGILITRVKALEGPVLGVAGILQTIPGLALLGFMIPLFGIGIKTAV 91

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L       +   I+ N   G         E A    +T W+    + LP      + G
Sbjct: 92  AAL----FLYSLLPIIRNTFTGIKDVDKATIEAAKGMGMTDWQILTKVQLPLALSVMMAG 147

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             TA       + ++     G       GLG +I
Sbjct: 148 IRTATVINVGTATLAAFIGAG-------GLGDFI 174


>gi|270291868|ref|ZP_06198083.1| ABC transporter, permease protein [Streptococcus sp. M143]
 gi|270279396|gb|EFA25238.1| ABC transporter, permease protein [Streptococcus sp. M143]
          Length = 253

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++F  L  + +  +  I    + +  +P     +     D   L  ++  T    L
Sbjct: 10  RRHISLFGFLGVLSIWQLAGIFKL-LPKFILPTPFEILQAFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 62  ATLRVALLGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 122 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 178 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|294783028|ref|ZP_06748352.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294479906|gb|EFG27683.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 513

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 72/187 (38%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ I+ +   +   + ++ R+   +++  ++I+ +IP +  L F +            
Sbjct: 28  LLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITGVGNT---- 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  S Y  + NI   + E S     +  Q+ + + +P ++P L
Sbjct: 84  ----TALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVL 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          V  +  +    + +   G+G  I   I   +        L +  + 
Sbjct: 140 MSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIALLA 192

Query: 253 FLYDQLL 259
            ++D +L
Sbjct: 193 LIFDFIL 199



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 11/191 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +     +D  + + L    +   ++ I IAS++ I +GI I      S  I     +L  
Sbjct: 5   LTKLLTEDFKFFLNLTVEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYT 64

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+       ++     +    + L +  +      I+ +   G         E +    
Sbjct: 65  IPSIALLGFFITITGVGNTTALIALIIYALL----PIIRSTYTGIVNINPLIIEASEGMG 120

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T  +    + LP   P  ++G         N   ++   +     +   GLG  I    
Sbjct: 121 STKLQQLFKVKLPLALPVLMSGIR-------NMVTMTIALAGIASFVGAGGLGVAIYRGI 173

Query: 548 EKGSFPEVVLG 558
              +     LG
Sbjct: 174 TTNNSAMTFLG 184


>gi|110680286|ref|YP_683293.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109456402|gb|ABG32607.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 279

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 87/276 (31%), Gaps = 16/276 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +    W F   L+  +    R    +          L        ++ +     V   A 
Sbjct: 5   LALIVWGFGWWLNIRLSHSPRADTRLFSLLIPIIFGLTIVVMWEILVQMLDISAVILPAP 64

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                    +  H  + D    I  G +T        ++ +I    V I     P ++  
Sbjct: 65  SAIAARFA-VSTHLLWADFEQTILKGAMT------GYVLGAIAAFAVAILADRSPFLTKG 117

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +AA P     P+ V  +     +    + +++ F     IL N +AG      
Sbjct: 118 ILPVGAFMAALPIVGTAPIFVRWLGSDWHSKAAVVGVMVFF----PILVNTVAGLKDSTA 173

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +++  ++    W     + LP   P+   G   A   A   +IV+E          T 
Sbjct: 174 MQRDLMRTYGAGYWTTLFKLRLPAAMPFVFNGLKIATTLALIGAIVAEFFGS-----PTV 228

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  I+ S  + +   V   +++      A    +
Sbjct: 229 GMGFRISTSVGQLAMDMVWAEIIVAALAGSAFYGLI 264



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 92/246 (37%), Gaps = 16/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF L   V+   ++ +L         P  I     ++   H L     +T L+  +
Sbjct: 34  LIPIIFGLTIVVMWEILVQMLDISAVILPAPSAIAARFAVST--HLLWADFEQTILKGAM 91

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  V+  +  F  A LA +S  L   ++P+   M ++PI+G     V +  + +  K   
Sbjct: 92  TGYVLGAIAAFAVAILADRSPFLTKGILPVGAFMAALPIVGTAPIFVRWLGSDWHSKAAV 151

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         +  +    L +      ++ R++    W   + L +P +MP + 
Sbjct: 152 VGVMVFF--------PILVNTVAGLKDSTAMQRDLMRTYGAGYWTTLFKLRLPAAMPFVF 203

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P  G+G  I+ ++ +  +  +   ++       
Sbjct: 204 NGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLAMDMVWAEIIVAALAGS 258

Query: 254 LYDQLL 259
            +  L+
Sbjct: 259 AFYGLI 264


>gi|322391754|ref|ZP_08065219.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
 gi|321145234|gb|EFX40630.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
          Length = 305

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +       A    L      ++S +    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSGKQFGALPMILGSFIVTILSAIIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +   ++ G   G  L+ IF +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 189 ASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 243



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  IIA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSAIIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P V +      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 136 IGLQVVVPFVRTVFGGTGFGILSGIFVLFVMILPT---VTFMTTDSLRAVPRHYREASLA 192

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    + L        T  +     A+  ++  ++       + T+
Sbjct: 193 MGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 244


>gi|168229515|ref|ZP_02654573.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194470452|ref|ZP_03076436.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194456816|gb|EDX45655.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335781|gb|EDZ22545.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 389

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITTGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|308186889|ref|YP_003931020.1| ABC transport system, permease component [Pantoea vagans C9-1]
 gi|308057399|gb|ADO09571.1| Putative ABC transport system, permease component [Pantoea vagans
           C9-1]
          Length = 215

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  +L   + + +  +L A+ ++++       L  + R L   ++ I  ++ +IP +   
Sbjct: 10  NWSTLLTLSWQHSWLVLVAVGLAIVIGVPLGILIVRVRWLATPILGIATVVLTIPTIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L N+P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G     L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGQLL-------LDGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +    D LL R     + K
Sbjct: 180 DIRMLIAGALMICLLAIFLDWLLHRLQQALTPK 212



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 8/218 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +   ++ L     + V+V + +A +I +P+GI I     +++ I   A ++   P
Sbjct: 5   HYIMDNWSTLLTLSWQHSWLVLVAVGLAIVIGVPLGILIVRVRWLATPILGIATVVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               F L++   S          ++  +   +   I+ N        P+  +E      +
Sbjct: 65  TIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALENLPDGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G +            +   
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGQLL-------LDGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 ++ G L++C   + L+  L         + +R
Sbjct: 178 GSDIRMLIAGALMICLLAIFLDWLLHRLQQALTPKGIR 215


>gi|183980068|ref|YP_001848359.1| hypothetical protein MMAR_0033 [Mycobacterium marinum M]
 gi|183173394|gb|ACC38504.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 269

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
              + G        D+ +    +L V  L Q      +  LSA V++ +          +
Sbjct: 44  AFAVAGALAYVTVADVSESERRSLSVSHLLQLLREHLVISLSATVLTCVVAIPVGIALTR 103

Query: 93  S--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
              RR    ++ +    Q+ P +G +    V F           +L AI A+       +
Sbjct: 104 GSMRRYSKPIITVAGFGQAAPAIGLIALGAVVFGIG--------QLGAIVALTVYGAMPI 155

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L  + R + E +R   LS +     + +P S+P +V  +  ++      +V +
Sbjct: 156 IANTVTGLDGVDRRIVEAARGMGLSAFSTLRRVELPLSLPVIVAGVRTAL----VLIVGT 211

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +    +     G+G  I   IK Q  + ++   + +  +    D L
Sbjct: 212 AALA---SFTGGGGLGQLITTGIKLQQPVTLIVGAILVAALALFIDWL 256



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 72/245 (29%), Gaps = 13/245 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P           V         C                  +      V +++ L    +
Sbjct: 21  PPTAPTTPGRPSVGRWALQPLTCAFAVAGALAYVTVADVSESERRSLSVSHLLQLLREHL 80

Query: 388 FRVVVLIIIASIIWIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
              +   ++  ++ IPVGI +  G     S  I   A    A PA     L         
Sbjct: 81  VISLSATVLTCVVAIPVGIALTRGSMRRYSKPIITVAGFGQAAPAIGLIALGAVVFGIGQ 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   + L++         I+ N + G         E A    ++ +   R + LP   P 
Sbjct: 141 LGAIVALTVYGAM----PIIANTVTGLDGVDRRIVEAARGMGLSAFSTLRRVELPLSLPV 196

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V G  TA       + ++     G       GLG  I    +      +++G +++   
Sbjct: 197 IVAGVRTALVLIVGTAALASFTGGG-------GLGQLITTGIKLQQPVTLIVGAILVAAL 249

Query: 566 VLALN 570
            L ++
Sbjct: 250 ALFID 254


>gi|317014227|gb|ADU81663.1| putative osmoprotection binding protein [Helicobacter pylori
           Gambia94/24]
          Length = 553

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L      +   VA+ +    + Y++  F +   +Y I L       V +   +  +  
Sbjct: 17  WLLHSVDMVIQHLVAMALKISVVKYLIKEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G  I+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSFIIALFSVLADQFV 236



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|108804904|ref|YP_644841.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108766147|gb|ABG05029.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 260

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 17/251 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G+    +P  +     +      L ++A+ T    L+    +         L  +S  
Sbjct: 24  LFGVPAFLLPGPLAIARALWASRGLLLEHAAPTAAEALAGFCCAAAAGAAAGLLINRSAL 83

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               L P L   Q++P++      V +F            L  +  +     + +T +  
Sbjct: 84  AERALYPWLVASQTLPVIAIAPVLVTWFGYG--------PLPKVLVVVLFCFFPVTVATV 135

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L ++  DL  + RSF     + F  + +P ++P L   + ++     + V+ +   V+
Sbjct: 136 DGLRSVEPDLVRLMRSFGAGRRRVFLMVELPAALPFLFGGLRLA---ATYSVIGA---VI 189

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGVIFLYDQLLFRPMIVWSNKFRL 272
           G+ V    G+G  +     + ++  +   +     M   +FL   L  R +  W+ +   
Sbjct: 190 GEWVGSSRGLGFLMIQDKNQFEIARMFAEIALLSAMGVALFLLVALAQRLLAPWTLRSEE 249

Query: 273 ERTTGIYPADS 283
            R+        
Sbjct: 250 TRSRQKGGRRP 260



 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 10/162 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           I         + P+       P     P++V+   Y  L       L+++    + +   
Sbjct: 78  INRSALAERALYPWLVASQTLPVIAIAPVLVTWFGYGPL----PKVLVVVLFCFFPVTVA 133

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  +   D   +  SF     R +  + LP   P+   G   A   +   +++ E  
Sbjct: 134 TVDGLRSVEPDLVRLMRSFGAGRRRVFLMVELPAALPFLFGGLRLAATYSVIGAVIGEWV 193

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   + GLG  + +   +     +   + ++    +AL
Sbjct: 194 G------SSRGLGFLMIQDKNQFEIARMFAEIALLSAMGVAL 229


>gi|313498802|gb|ADR60168.1| ABC transporter, permease protein [Pseudomonas putida BIRD-1]
          Length = 242

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 6/196 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++    +T+    +   +A +I             + + + P+A LL   P    
Sbjct: 32  ADGPMLLGALWMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAI 91

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL++   S   L   +  +L+ IF     I+ N + G  +       +      + W+ 
Sbjct: 92  APLIIIWCSDTTLALVICATLVAIF----PIIANTVLGLRSVNPGLLNLFRLNRASRWQV 147

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P +  G   A G A   ++V+E  +          L   I ++  + + P
Sbjct: 148 LLRLRIPSALPCFFAGLRIASGLALIGAVVAEFVAGTGGTGAG--LAYQILQAGFQLNIP 205

Query: 554 EVVLGVLIMCCFVLAL 569
            +   ++++    +AL
Sbjct: 206 RLFAALVLIALTGVAL 221



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 81/235 (34%), Gaps = 10/235 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +L +  +  +   +    VP        +  D   L      T      +  ++++   
Sbjct: 1   MLLGVWQLACIAWKVPVYLVPSPADIGRTLAADGPMLLGALWMTLKITFLSFALAVVIGT 60

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A +  +SR +   L P   ++Q  P++      +++  +     VI A L AIF    
Sbjct: 61  LAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVAIF---- 116

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +  +    L ++   L  + R  R S WQ    L +P ++P     + ++     
Sbjct: 117 ----PIIANTVLGLRSVNPGLLNLFRLNRASRWQVLLRLRIPSALPCFFAGLRIASGLAL 172

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              V +E +           +   I  A  + ++  +  A++ +         L+
Sbjct: 173 IGAVVAEFVAGTGGTGAG--LAYQILQAGFQLNIPRLFAALVLIALTGVALFSLM 225


>gi|111220875|ref|YP_711669.1| binding-protein-dependent transport system inner membrane component
           [Frankia alni ACN14a]
 gi|111148407|emb|CAJ60079.1| conserved hypothetical binding-protein-dependent transport system
           inner membrane component [Frankia alni ACN14a]
          Length = 264

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 8/160 (5%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               I   + P A  + A P  V  PL  +  S     P   +  +++F        N  
Sbjct: 93  RSRLIDGMLAPVAAAMNAIPIIVLAPLFNAMFSTTSSVPRRAVVAVVVFFPV---FVNTA 149

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G        +E+  S  +  WR+ R + LPG  P++ TG   A   A  A++V+E    
Sbjct: 150 RGLREVAPVHRELMRSLAVGPWRFARTVSLPGALPFFFTGLRLASSLAVIAAVVAEYFGG 209

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                R  GLG+ I  +    ++P     V+  C   L  
Sbjct: 210 -----RQNGLGSRITSAAANSAYPRAWAFVVAACLLGLLF 244



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 12/187 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + +  +   V A +AA+SR +  +L P+   M +IPI+         F          
Sbjct: 75  VGLALGAIAGLVAAVVAARSRLIDGMLAPVAAAMNAIPIIVLAPLFNAMFSTTSSVPRRA 134

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                +F            +  + L  +     E+ RS  +  W+    + +P ++P   
Sbjct: 135 VVAVVVFFPVFV-------NTARGLREVAPVHRELMRSLAVGPWRFARTVSLPGALPFFF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ S      V +E            G+GS I  A            ++    +  
Sbjct: 188 TGLRLASSLAVIAAVVAEYFGG-----RQNGLGSRITSAAANSAYPRAWAFVVAACLLGL 242

Query: 254 LYDQLLF 260
           L+  ++ 
Sbjct: 243 LFYLVVL 249


>gi|28871710|ref|NP_794329.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28854962|gb|AAO58024.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 237

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + I  I      L  Y     + +L +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGISTIKQYQDDLLFYLQAHLILVLVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VIGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +++       A    ++G        +GS I   I   +
Sbjct: 170 ALAI--NVGTAPLAFLIGANS-----LGSLIFPGIALNN 201



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   V I +    I +I      Q    +++     +  V+V ++ A +I IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVIGIPAGIALS 68

Query: 410 ---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|39933959|ref|NP_946235.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|39647806|emb|CAE26326.1| ABC transporter, permease [Rhodopseudomonas palustris CGA009]
          Length = 283

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 74/216 (34%), Gaps = 13/216 (6%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           GI  + I +I N  +   +   +W   +T++      +I +++ +  GI +G    +S  
Sbjct: 62  GIVLKLIDWIQNDTSIGPLWRQVW---VTIYEAGAGFLIGAVLGVLCGIALGRNHLLSDV 118

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
              + ++  + P  V   + +  +     +      +++ F        N   G      
Sbjct: 119 FSIYIKVANSIPRVVLGSIFIVALGLGAASKIALAVVMVFFVVF----ANAFQGVREADK 174

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +    A     + W+    +++P    + +     + G A   +IV E            
Sbjct: 175 NLIANARILGASPWQVTTSVVIPSALSWILASLHVSFGFALVGAIVGEFLG------ARE 228

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  IA +        V   ++++    L     L
Sbjct: 229 GMGLLIATAQGSFDSNGVFAAMIVIAVVALVAEGLL 264



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
             ++D +     +  L +    T     +  +I  +   +      ++  L  V    + 
Sbjct: 65  LKLIDWIQNDTSIGPLWRQVWVTIYEAGAGFLIGAVLGVLCGIALGRNHLLSDVFSIYIK 124

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           +  SIP +   +  +V        K+  A +   F +F         + +Q +    ++L
Sbjct: 125 VANSIPRVVLGSIFIVALGLGAASKIALAVVMVFFVVFA--------NAFQGVREADKNL 176

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              +R    S WQ    + +P ++  ++ ++ +S     F +V +   +VG+ +    G+
Sbjct: 177 IANARILGASPWQVTTSVVIPSALSWILASLHVSFG---FALVGA---IVGEFLGAREGM 230

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G  IA A    D   +  AM+ +  V  + + LL
Sbjct: 231 GLLIATAQGSFDSNGVFAAMIVIAVVALVAEGLL 264


>gi|257482126|ref|ZP_05636167.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330987533|gb|EGH85636.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331011405|gb|EGH91461.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 237

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + I  I      L  Y     + +L +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGISTIKQYQDDLLFYLQAHLILVLVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +++       A    ++G        +GS I   I   +
Sbjct: 170 ALAI--NVGTAPLAFLIGANS-----LGSLIFPGIALNN 201



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   V I +    I +I      Q    +++     +  V+V ++ A ++ IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALS 68

Query: 410 ---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|40787265|gb|AAR90182.1| putative transporter permease [Rhodococcus sp. DK17]
          Length = 269

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   ++    +  +  +P+G+ +     I   ++PF     A P  +F+P++V+ +   +
Sbjct: 80  TSMTILAAFALGVLGGVPLGVLLWRVRVIGRVLEPFIVTGYAMPTLLFYPILVAVLGL-N 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + ++  M       I    +           ++A S   +  + +  ++ P   P 
Sbjct: 139 AGPIIVIASTMALI---PIALTTMVALGDVKPVLHKLARSVDASRRQQYFKVLFPAATPL 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       A   +I  E        L + GLG        +    ++   + I+  F
Sbjct: 196 IFPGIKLGFIYAVIGTIAMEFI------LASKGLGFRAGFMYRELYVADMWAYIAIVVVF 249

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
            +A+N  L         R +R
Sbjct: 250 SIAVNSAL-----GLAERAIR 265



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 14/219 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P +I+  V   +         +RT++ +L+A  + +L       L  + R +G VL
Sbjct: 53  QMVAPSEILAHVAAIIPSTHFVTDLTRTSMTILAAFALGVLGGVPLGVLLWRVRVIGRVL 112

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +    ++P L F    V                  I    T  +  +  +   +L +
Sbjct: 113 EPFIVTGYAMPTLLFYPILVAVLGLNAGP--------IIVIASTMALIPIALTTMVALGD 164

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L +++RS   S  Q+++ +  P + P +   + +         +A E I      +
Sbjct: 165 VKPVLHKLARSVDASRRQQYFKVLFPAATPLIFPGIKLGFIYAVIGTIAMEFI------L 218

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              G+G       +E  +  +   +  ++      +  L
Sbjct: 219 ASKGLGFRAGFMYRELYVADMWAYIAIVVVFSIAVNSAL 257


>gi|29375450|ref|NP_814604.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecalis V583]
 gi|227520109|ref|ZP_03950158.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX0104]
 gi|227554974|ref|ZP_03985021.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis HH22]
 gi|229546707|ref|ZP_04435432.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX1322]
 gi|229548800|ref|ZP_04437525.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis ATCC 29200]
 gi|256617735|ref|ZP_05474581.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256854289|ref|ZP_05559653.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|256957276|ref|ZP_05561447.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256964314|ref|ZP_05568485.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|257077750|ref|ZP_05572111.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|257081110|ref|ZP_05575471.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis E1Sol]
 gi|257083779|ref|ZP_05578140.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis Fly1]
 gi|257086204|ref|ZP_05580565.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|257089276|ref|ZP_05583637.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257415429|ref|ZP_05592423.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis AR01/DG]
 gi|257418460|ref|ZP_05595454.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257421111|ref|ZP_05598101.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294781275|ref|ZP_06746621.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300860101|ref|ZP_07106189.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307267941|ref|ZP_07549329.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307271862|ref|ZP_07553130.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307277302|ref|ZP_07558404.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278441|ref|ZP_07559516.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307286671|ref|ZP_07566757.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|307292457|ref|ZP_07572311.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312901595|ref|ZP_07760867.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904422|ref|ZP_07763582.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312952868|ref|ZP_07771729.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|29342910|gb|AAO80674.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Enterococcus faecalis V583]
 gi|227072453|gb|EEI10416.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX0104]
 gi|227175883|gb|EEI56855.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis HH22]
 gi|229306029|gb|EEN72025.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis ATCC 29200]
 gi|229308167|gb|EEN74154.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis TX1322]
 gi|256597262|gb|EEU16438.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256709849|gb|EEU24893.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T8]
 gi|256947772|gb|EEU64404.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256954810|gb|EEU71442.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|256985780|gb|EEU73082.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|256989140|gb|EEU76442.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis E1Sol]
 gi|256991809|gb|EEU79111.1| glycine betaine/carnitine/choline ABC [Enterococcus faecalis Fly1]
 gi|256994234|gb|EEU81536.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|256998088|gb|EEU84608.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257157257|gb|EEU87217.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ARO1/DG]
 gi|257160288|gb|EEU90248.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257162935|gb|EEU92895.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294451611|gb|EFG20067.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295113932|emb|CBL32569.1| ABC-type proline/glycine betaine transport systems, permease
           component [Enterococcus sp. 7L76]
 gi|300850919|gb|EFK78668.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306496488|gb|EFM66051.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306502149|gb|EFM71433.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504947|gb|EFM74142.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306506009|gb|EFM75177.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511368|gb|EFM80370.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306515582|gb|EFM84109.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310629171|gb|EFQ12454.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632249|gb|EFQ15532.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311291316|gb|EFQ69872.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315027050|gb|EFT38982.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315029036|gb|EFT40968.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315032354|gb|EFT44286.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034387|gb|EFT46319.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145169|gb|EFT89185.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315149623|gb|EFT93639.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153149|gb|EFT97165.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315155168|gb|EFT99184.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315157702|gb|EFU01719.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315163077|gb|EFU07094.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165063|gb|EFU09080.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315167874|gb|EFU11891.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315171767|gb|EFU15784.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174893|gb|EFU18910.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315574099|gb|EFU86290.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577227|gb|EFU89418.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315581752|gb|EFU93943.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|327534445|gb|AEA93279.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Enterococcus
           faecalis OG1RF]
 gi|329577854|gb|EGG59275.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Enterococcus faecalis TX1467]
          Length = 220

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 67/180 (37%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R L   ++ + +I+Q++P L  L+  ++    
Sbjct: 26  LRHFLISIYGVIFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAMLSILMLGMGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  +  + R++ +V +   ++  Q  + + +
Sbjct: 86  GV--------NTVVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQLLYMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+   
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGASIILVG 190



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  YV           +  +I A+I+ IP+GI I  +  +++ I   A ++   PA   
Sbjct: 16  QNGGYVFQQFLRHFLISIYGVIFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + + +   +   I+ N   G      +  +V     +T  + 
Sbjct: 76  LSILMLGMGLGVNT----VVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQL 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP      + G   A   A   + +      G       GLG  I   T      
Sbjct: 132 LYMVELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGA 184

Query: 554 EVVL 557
            ++L
Sbjct: 185 SIIL 188


>gi|15599083|ref|NP_252577.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107103404|ref|ZP_01367322.1| hypothetical protein PaerPA_01004474 [Pseudomonas aeruginosa PACS2]
 gi|116051925|ref|YP_789232.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889831|ref|YP_002438695.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236787|ref|ZP_04930110.1| hypothetical protein PACG_02800 [Pseudomonas aeruginosa C3719]
 gi|254242580|ref|ZP_04935902.1| hypothetical protein PA2G_03334 [Pseudomonas aeruginosa 2192]
 gi|296387593|ref|ZP_06877068.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313109310|ref|ZP_07795277.1| putative permease component of an ABC-type transpo [Pseudomonas
           aeruginosa 39016]
 gi|9950069|gb|AAG07275.1|AE004806_2 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115587146|gb|ABJ13161.1| putative permease component of an ABC-type transpo [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126168718|gb|EAZ54229.1| hypothetical protein PACG_02800 [Pseudomonas aeruginosa C3719]
 gi|126195958|gb|EAZ60021.1| hypothetical protein PA2G_03334 [Pseudomonas aeruginosa 2192]
 gi|218770054|emb|CAW25816.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310881779|gb|EFQ40373.1| putative permease component of an ABC-type transpo [Pseudomonas
           aeruginosa 39016]
          Length = 240

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS---RRLGMVLVP 102
              +    I      L  Y     + + S+M  +LL       L ++     +   ++  
Sbjct: 23  IHWITPATILHYREDLLFYLQAHLVLVFSSMAAALLVGVPAGILLSRPGMQAQAERLMQ- 81

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + ++  +IP L  L   +                 AI A+F + +  +  + Y+ L N+ 
Sbjct: 82  VFNVGNTIPPLAVLAIALAIIGIGNGP--------AILALFLASLLPIVRNTYEGLRNVS 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             L+E +    ++  Q    + +P ++P +V  + ++++ 
Sbjct: 134 PALKEAATGIGMTPNQVLLRVELPNAVPIIVGGVRVALAL 173



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 8/141 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFP 435
           +++     +  V   +  A ++ +P GI +   G +      +Q    +    P      
Sbjct: 38  LLFYLQAHLVLVFSSMAAALLVGVPAGILLSRPGMQAQAERLMQ-VFNVGNTIPPLAVLA 96

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + ++ +       N    L +   +   I+ N   G        KE A+   +T  +   
Sbjct: 97  IALAIIGIG----NGPAILALFLASLLPIVRNTYEGLRNVSPALKEAATGIGMTPNQVLL 152

Query: 496 YIILPGIFPYYVTGAITACGG 516
            + LP   P  V G   A   
Sbjct: 153 RVELPNAVPIIVGGVRVALAL 173


>gi|332673377|gb|AEE70194.1| osmoprotection protein [Helicobacter pylori 83]
          Length = 553

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 29  LVAIALKISVVKHLIKEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 236



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPLIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 229 SVLADKFV 236


>gi|315586517|gb|ADU40898.1| glycine betaine ABC superfamily ATP binding cassette transporter,
           membrane protein [Helicobacter pylori 35A]
          Length = 518

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       S +    L+PI++ + +IP L      +           
Sbjct: 29  VALSSFLVLVFGVLIGVFVFYSSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 87  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKKLFFRVRFLLAIPQ 140

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 141 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 193

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 194 SVLADKFV 201



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 11/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y I L       V +   +  +  + +G+++ +     + + P    L   P+   F L 
Sbjct: 17  YFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYSSKARAFLLPIVNFLYTIPSLALFALF 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +     N  L L L  +      I+ +          +  + A        + +  +
Sbjct: 77  IPLIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKKLFFRV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                 P  + G   A        ++  +A  G +        A I       +   +V 
Sbjct: 133 RFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVA 185

Query: 558 GVLIMCCFVLALNRFL 573
           G LI+  F +  ++F+
Sbjct: 186 GSLIIALFSVLADKFV 201


>gi|261339663|ref|ZP_05967521.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288318489|gb|EFC57427.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 215

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++ I  I+ +IP +   
Sbjct: 10  NWDYLLMLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLVGQGI---GALPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  IV + K
Sbjct: 180 DIRMLIAGALMICLLAIVLDWLLHRLQIVLTPK 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y++ L    ++ V + + +A II +P+GI I     +++ +   A ++   P
Sbjct: 5   HYILDNWDYLLMLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLVGQGIGALPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIVLDWLLHR 204


>gi|222081002|ref|YP_002540365.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
 gi|221725681|gb|ACM28770.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84]
          Length = 262

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 16/233 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL-RMLSAMV 77
           +   L  + +   + +     ++   P   +    I L  +         T   +  A+V
Sbjct: 23  VIGALVLLGIWQGLALSGFFFRDVVPPLQKIAYGLIALFANGAFYANLAVTGGELALALV 82

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I  L   +   L   S+ +       L  +   P +      ++ F      KV    ++
Sbjct: 83  IGSLAGVLAGLLLGGSQVMSDAYESWLSYLGPTPKIILFPVMIMLFGVDAGSKVAMGAVS 142

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F         +  S+   +  +   L  V RSF+ + WQ F  + +P     LV    
Sbjct: 143 CFF--------PIAISVASGIHGVDPTLRRVGRSFQANAWQVFLKIELPAMTATLVNGFR 194

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +        V+ +E      T +   GIG  I  A    D+  + YA+L +  
Sbjct: 195 LGFGVAMIGVLLAE------TKLSNQGIGFMIINAYTRFDMPQM-YALLIVTI 240



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 10/178 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T   + + ++I S+  +  G+ +G    +S   + +   L   P  + FP+++     
Sbjct: 71  AVTGGELALALVIGSLAGVLAGLLLGGSQVMSDAYESWLSYLGPTPKIILFPVMIMLFGV 130

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       +      + I  +V +G        + V  SF    W+ +  I LP + 
Sbjct: 131 DAGSK----VAMGAVSCFFPIAISVASGIHGVDPTLRRVGRSFQANAWQVFLKIELPAMT 186

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
              V G     G A    +++E        L   G+G  I  +  +   P++   +++
Sbjct: 187 ATLVNGFRLGFGVAMIGVLLAE------TKLSNQGIGFMIINAYTRFDMPQMYALLIV 238


>gi|21673726|ref|NP_661791.1| phosphate ABC transporter, permease protein, putative [Chlorobium
           tepidum TLS]
 gi|21646849|gb|AAM72133.1| phosphate ABC transporter, permease protein, putative [Chlorobium
           tepidum TLS]
          Length = 448

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 8/155 (5%)

Query: 79  SLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA              +L    + +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGIVAAVYFTEYANEGWFTSMLRSANNTLAGVPSIVFGLFGLAFFINTLHVSH 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++  +P+  +E S S   + W     + +P ++PG
Sbjct: 293 SKSVLAGSLTLAIMILPTIIRAAEEAILAVPKTYKEASLSLGSTKWNTIMTVILPAALPG 352

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           ++   ++S+        A  +     +V    G+G
Sbjct: 353 ILTGGVISLGRA-AGETAPIIFTAAVSVGAAVGLG 386



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 63/191 (32%), Gaps = 21/191 (10%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
            G+I +      +   IW      F + V    A +   P+GI         +    F  
Sbjct: 203 WGFITDSSIDSHIFGGIWPEIKGTFFLAVG---AMLFAFPLGIVAAVYFTEYANEGWFTS 259

Query: 424 LLAA-------FPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
           +L +        P+ VF        ++ +   H    L  SL +       I+       
Sbjct: 260 MLRSANNTLAGVPSIVFGLFGLAFFINTLHVSHSKSVLAGSLTLAIMILPTIIRAAEEAI 319

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVASW 529
            A P  +KE + S   T W     +ILP   P  +TG + + G A       I +   S 
Sbjct: 320 LAVPKTYKEASLSLGSTKWNTIMTVILPAALPGILTGGVISLGRAAGETAPIIFTAAVSV 379

Query: 530 GHIHLRTTGLG 540
           G       GLG
Sbjct: 380 G----AAVGLG 386


>gi|237801426|ref|ZP_04589887.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024285|gb|EGI04342.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 217

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D   +    ++    +  A+ +++L       L  +   L   L     ++ ++P +  
Sbjct: 10  IDWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   ++
Sbjct: 70  FGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I  
Sbjct: 127 FGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISR 179

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
            D+  ++   + +  +  + D
Sbjct: 180 SDMSMLIVGAVLVSILAIIAD 200



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 8/197 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   V+ L    +  V + + +A ++ +P+G+ +   P ++  +Q  A +L   P+   F
Sbjct: 11  DWAQVLHLTTQHITLVGIAVTLAILVGVPLGVLMTRFPALAGPLQASATVLLTVPSIALF 70

Query: 435 PLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++   S +        ++  +   +   I+ N     +      +E A    +T  + 
Sbjct: 71  GLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMTFGQR 130

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  TA         ++     G       GLG  I  S  +    
Sbjct: 131 LRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISRSDMS 183

Query: 554 EVVLGVLIMCCFVLALN 570
            +++G +++    +  +
Sbjct: 184 MLIVGAVLVSILAIIAD 200


>gi|254459995|ref|ZP_05073411.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacterales bacterium HTCC2083]
 gi|206676584|gb|EDZ41071.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacteraceae bacterium HTCC2083]
          Length = 287

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 75/179 (41%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   +T+   ++   + +++ I + + I F   +   + P+       P     P++
Sbjct: 82  SLIYHSWVTLSATLLGFALGAVLGIALAVGIVFNRTMDMSVMPWVITSQTIPILAVAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   L  +++ ++ + + ++  ++ G  +  +   +   ++H +G + +  +
Sbjct: 142 IVVLNAVGIQGLLPKAIISMYLSFFPVVVGMVKGLRSPDHMQLDQMRTWHASGAQTFWRL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY  T    A   A   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 202 RLPSSMPYLFTSLKIAMAAAIVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIW 255



 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    + T                SL  ++  T    L    +  +     A     +R 
Sbjct: 58  LPAPHQVTQEIWKTTAEKKITSKRSLIYHSWVTLSATLLGFALGAVLGIALAVGIVFNRT 117

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M 
Sbjct: 118 MDMSVMPWVITSQTIPILAVAPMIIVVLNAVGIQGLLPKAIISMYLSF----FPVVVGMV 173

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +      +  R++  SG Q FW L +P SMP L  ++ ++M+      +  E+   
Sbjct: 174 KGLRSPDHMQLDQMRTWHASGAQTFWRLRLPSSMPYLFTSLKIAMAAAIVGAIVGEL--- 230

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 231 --PTGAVAGLGARLLAGSYYGQTIQIW 255


>gi|300854065|ref|YP_003779049.1| putative nitrate/sulfonate/bicarbonate ABC transporter permease
           [Clostridium ljungdahlii DSM 13528]
 gi|300434180|gb|ADK13947.1| predicted ABC nitrate/sulfonate/bicarbonate family transporter,
           permease component [Clostridium ljungdahlii DSM 13528]
          Length = 250

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 85/215 (39%), Gaps = 15/215 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             +   L H + +  +P  +  +  +  D  ++ +    T         IS++F+F+ A 
Sbjct: 24  WQLTINLAH-VPQYIIPSPLDILKTLVSDFQNIMENTGTTLYESFIGFFISIIFSFILAI 82

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +      +   + PIL I Q+IP +      +++F            L  I  +     +
Sbjct: 83  IMDSFEIVRKSIYPILLISQTIPTIAIAPLFIIWFGFGV--------LPKIIVVVMVCFF 134

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S+      + RD   +  + + S  Q F++L +P++M      + ++     + ++
Sbjct: 135 PIVVSLVDGFEKVDRDYINLFSTMKASKLQTFYHLKLPYAMVNFFSGLKIA---ATYMIM 191

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           ++   ++G+ +    GIG Y+  A     L  +  
Sbjct: 192 SA---IIGEWLGGDNGIGVYMVRAKNAYQLDKVFA 223



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 64/185 (34%), Gaps = 10/185 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D   ++     T++   +   I+ I    + I +     +   I P   +    P    
Sbjct: 50  SDFQNIMENTGTTLYESFIGFFISIIFSFILAIIMDSFEIVRKSIYPILLISQTIPTIAI 109

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL +    +      L   ++++    + I+ +++ G      D+  + S+   +  + 
Sbjct: 110 APLFIIWFGFG----VLPKIIVVVMVCFFPIVVSLVDGFEKVDRDYINLFSTMKASKLQT 165

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           + ++ LP     + +G   A      ++I+ E     +      G+G Y+  +       
Sbjct: 166 FYHLKLPYAMVNFFSGLKIAATYMIMSAIIGEWLGGDN------GIGVYMVRAKNAYQLD 219

Query: 554 EVVLG 558
           +V   
Sbjct: 220 KVFAS 224


>gi|271968810|ref|YP_003343006.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270511985|gb|ACZ90263.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 250

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 10/167 (5%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G+   +   + P    L   P     PL+        L       +L++    + + F V
Sbjct: 82  GWYRPLDRFLSPLLGALFLTPRIALVPLIALWFGLQDL----AKIVLILAFGFFEVFFTV 137

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E+A ++ +   R  R ++LP   PY +TG       A    +++    
Sbjct: 138 RDGVRDLERSHVELARAYCVPPGRMLRSVVLPAARPYVLTGLRLGLVHALVGVVLA---- 193

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                L T+G+G  I          E++  +L +    LA+N  L  
Sbjct: 194 --GFFLETSGIGGLIYNLGAAFRTAELIAALLSVMAVGLAVNVGLRR 238



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 14/248 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R +      LA +L++               P  +       L    L     +T +++ 
Sbjct: 5   RDWAVRIGTLALLLLVWQQVAQRMSAAILPTPARVGAAAGDLLAGGELASAWGQTAVQVT 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            AM ++ +       L    R L   L P+L  +   P +  +    ++F          
Sbjct: 65  VAMAVAAVAGVGLGLLFGWYRPLDRFLSPLLGALFLTPRIALVPLIALWFGL-------- 116

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +LA I  I     + + F++   + ++ R   E++R++ +   +    + +P + P ++
Sbjct: 117 QDLAKIVLILAFGFFEVFFTVRDGVRDLERSHVELARAYCVPPGRMLRSVVLPAARPYVL 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + + +      VV +         +   GIG  I           ++ A+L+++ V  
Sbjct: 177 TGLRLGLVHALVGVVLAGFF------LETSGIGGLIYNLGAAFRTAELIAALLSVMAVGL 230

Query: 254 LYDQLLFR 261
             +  L R
Sbjct: 231 AVNVGLRR 238


>gi|168259499|ref|ZP_02681472.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205351077|gb|EDZ37708.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 389

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|320334535|ref|YP_004171246.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319755824|gb|ADV67581.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 272

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 77/201 (38%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L      +  R+     +++        L A  R L   +   L  +QS+P + F+ F
Sbjct: 69  GKLLLSIGNSLRRVAIGYAVAVALGLGVGLLLATWRGLRDTVGAYLTGIQSVPSIAFVPF 128

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F           E A +F +       +  ++  +L N+P       R+    G  
Sbjct: 129 AILFFGLN--------ERAVLFVVILEGFIPVALAVSGALLNVPPAWRVAGRTLGSRGLP 180

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + VP S+P +V  +  + S  W  +V  E++         PG+G  + +      +
Sbjct: 181 FTLNVMVPASLPHIVGGLRTAWSFAWRALVGGELLTAN------PGLGQQLEVGRNTGSV 234

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  ++ +  +  ++D ++
Sbjct: 235 ALVLATIIIIGIIGGVFDAVI 255



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 20/239 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---------IAWQSIGYIVNHFTYQDVLY 378
           P+    L        ++ + W+     + +            WQ I Y +     QD   
Sbjct: 12  PKRGRALLWQALGLLLILVAWYVATDVLKLYPPYVFPSPKAVWQEISYGLWGSGPQDGKL 71

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++ +G  ++ RV +   +A  + + VG+ +     +   +  +   + + P+  F P  +
Sbjct: 72  LLSIG-NSLRRVAIGYAVAVALGLGVGLLLATWRGLRDTVGAYLTGIQSVPSIAFVPFAI 130

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +  ++I      +   V       P  ++    +    G  +   ++
Sbjct: 131 LFFGL----NERAVLFVVILEGFIPVALAVSGALLNVPPAWRVAGRTLGSRGLPFTLNVM 186

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +P   P+ V G  TA   AW A +  E+ +         GLG  +      GS   V+ 
Sbjct: 187 VPASLPHIVGGLRTAWSFAWRALVGGELLT------ANPGLGQQLEVGRNTGSVALVLA 239


>gi|320322604|gb|EFW78697.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 217

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 79/204 (38%), Gaps = 10/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +D   +    ++    +  A+ +++L       L  +   L   L     ++ ++P +  
Sbjct: 10  IDWAQVLHLTTQHITLVGIAVTLAILVGVSLGVLMTRFPALAGPLQASATVLLTVPSIAL 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   ++
Sbjct: 70  FGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I  
Sbjct: 127 FGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISR 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
            D+  ++   + +  +  + D LL
Sbjct: 180 SDMSMLIVGAVLVSILAIIADLLL 203



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 8/200 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   V+ L    +  V + + +A ++ + +G+ +   P ++  +Q  A +L   P+   F
Sbjct: 11  DWAQVLHLTTQHITLVGIAVTLAILVGVSLGVLMTRFPALAGPLQASATVLLTVPSIALF 70

Query: 435 PLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++   S +        ++  +   +   I+ N     +      +E A    +T  + 
Sbjct: 71  GLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGMTFGQR 130

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  TA         ++     G       GLG  I  S  +    
Sbjct: 131 LRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASISRSDMS 183

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +++G +++    +  +  L
Sbjct: 184 MLIVGAVLVSILAIIADLLL 203


>gi|289829748|ref|ZP_06547281.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
          Length = 209

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 4   NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 63

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 64  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 120

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 121 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 173

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 174 DIRMLIAGALMICLLAIVLDWLLHRLQVVLAPK 206



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 8/215 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P+  
Sbjct: 2   LDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIA 61

Query: 433 FFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F L++   S       +  ++  +   +   I+ N      + P   +E      +T W
Sbjct: 62  LFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFW 121

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R++ +P   P    G  TA         ++ V   G + L                 
Sbjct: 122 QRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGSD 174

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              ++ G L++C   + L+  L     +   + +R
Sbjct: 175 IRMLIAGALMICLLAIVLDWLLHRLQVVLAPKGIR 209


>gi|163790841|ref|ZP_02185266.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Carnobacterium sp. AT7]
 gi|159873909|gb|EDP67988.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Carnobacterium sp. AT7]
          Length = 224

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 75/204 (36%), Gaps = 19/204 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +         ++  +L   ++   +++Q+IP L  L+  ++    
Sbjct: 28  IRHFLISIYGVLFAGIIGIPLGFWISRHGKLADWVIGAANVIQTIPSLAMLSILMLGLGL 87

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  + ++ +++ +  +   ++ WQ  + + +
Sbjct: 88  GV--------NTVVTTVFLYSLLPIIKNTYAGVQSVDKNILDSGKGMGMTRWQLTYIVEL 139

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +  +M       V    +    T I   G+G  I   +      AI+ A 
Sbjct: 140 PLALSIIMAGIRNAM-------VVGIGVTAIGTFIGAGGLGDIITRGVNVTGGGAIILAG 192

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNK 269
                ++ +   L     + W  K
Sbjct: 193 AIPTALMAVISDL----FLGWIEK 212



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 16/214 (7%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W+ + +  +          I    I+++     ++ A II IP+G WI     ++  +  
Sbjct: 9   WEQLIFYFSENGLYIWTQFIRHFLISIY----GVLFAGIIGIPLGFWISRHGKLADWVIG 64

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A ++   P+     +++  +          +   +   +   I+ N  AG  +   +  
Sbjct: 65  AANVIQTIPSLAMLSILMLGLGLGVNT----VVTTVFLYSLLPIIKNTYAGVQSVDKNIL 120

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +      +T W+    + LP      + G   A       + +      G       GLG
Sbjct: 121 DSGKGMGMTRWQLTYIVELPLALSIIMAGIRNAMVVGIGVTAIGTFIGAG-------GLG 173

Query: 541 AYIAESTE-KGSFPEVVLGVLIMCCFVLALNRFL 573
             I       G    ++ G +      +  + FL
Sbjct: 174 DIITRGVNVTGGGAIILAGAIPTALMAVISDLFL 207


>gi|306833714|ref|ZP_07466841.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
 gi|304424484|gb|EFM27623.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
          Length = 211

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 5/174 (2%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA II +P+G +   +P +        Q L   P+     +++  +    L   + L
Sbjct: 30  ALVIALIIALPLGYFSYEKPFVRQLSTLLTQGLRVIPSLGILFILIPFIGVGRLPALIAL 89

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +L I      IL N I G ++   +  E A    +T  +    +  P   P+ + G   
Sbjct: 90  VILGIP----PILLNTIVGVASVSENLLETALGLGMTRSQLLTKVQFPLALPHILNGIKL 145

Query: 513 ACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           A      +A++ + + + G   L  TGLG Y  +    G     +L  L M  F
Sbjct: 146 ALVEIIASATLATYIGAGGLGTLIFTGLGLYRYDLLLIGGGSVAILSFLSMIIF 199



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             Y  +       A+VI+L+        + +   +  +   +   ++ IP LG L   + 
Sbjct: 17  LGYVWQHISLSFEALVIALIIALPLGYFSYEKPFVRQLSTLLTQGLRVIPSLGILFILIP 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +             L A+ A+    +  +  +    + ++  +L E +    ++  Q   
Sbjct: 77  FIGVG--------RLPALIALVILGIPPILLNTIVGVASVSENLLETALGLGMTRSQLLT 128

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++P ++  + +++      ++AS  +    T I   G+G+ I   +       +
Sbjct: 129 KVQFPLALPHILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGLYRYDLL 181

Query: 242 LYAMLTMLGVIFL 254
           L    ++  + FL
Sbjct: 182 LIGGGSVAILSFL 194


>gi|302392075|ref|YP_003827895.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Acetohalobium arabaticum DSM 5501]
 gi|302204152|gb|ADL12830.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 282

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/279 (11%), Positives = 94/279 (33%), Gaps = 19/279 (6%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
           + F  +   + K      V   H             ++ +  +    ++ G  +   ++ 
Sbjct: 2   SMFERIKAVLNKYLTKDSVTDEHGKYLKKMRLRKISINTLQILILAALIIGWQLAAKYKI 61

Query: 364 IGYIVNHFTYQDVLYVIWLGC---------ITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +   +  +  Q +  +  +           +T++  ++  ++ +   + +   + +  ++
Sbjct: 62  VDPFITSYPSQIIKTIYEMSLNGELFKHIWVTVYETLIGFLLGATGGLVIASILWWSDYL 121

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           S   +PF  +L A P     P+++  +     N  + +  + +  +    +  V  G   
Sbjct: 122 SQIFEPFIIVLNALPKMALGPVLIIWLG----NGTIAIIGMALLISIIVTIVMVYNGFKE 177

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              +  ++  +     ++ ++ ++LP   P          G +   +IV E        +
Sbjct: 178 TDQNKIKLLRTLGADKFQIFKKVVLPDNLPTIFGALKVNIGLSLVGTIVGEFL------V 231

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              GLG  I    +      V+  V+I+      L   +
Sbjct: 232 SEAGLGYLIVYGGQVFKLDLVMTSVIILSVLAGLLYYLV 270



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 81/228 (35%), Gaps = 19/228 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  I+  +        L ++   T    L   ++      V A++   S  L  +  
Sbjct: 67  TSYPSQIIKTIYEMSLNGELFKHIWVTVYETLIGFLLGATGGLVIASILWWSDYLSQIFE 126

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + ++ ++P +      +++  N     +  A L +I              +Y      
Sbjct: 127 PFIIVLNALPKMALGPVLIIWLGNGTIAIIGMALLISIIV--------TIVMVYNGFKET 178

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++  ++ R+     +Q F  + +P ++P +   + +++       +  E +V       
Sbjct: 179 DQNKIKLLRTLGADKFQIFKKVVLPDNLPTIFGALKVNIGLSLVGTIVGEFLV------S 232

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G  I    +   L  ++ +++ +  +  L        ++ W  K
Sbjct: 233 EAGLGYLIVYGGQVFKLDLVMTSVIILSVLAGLLY-----YLVAWLEK 275


>gi|328555088|gb|AEB25580.1| OpuBD [Bacillus amyloliquefaciens TA208]
          Length = 225

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     +V + +F      + A+  RL   +  + +++Q++P L  L   ++     
Sbjct: 24  RHFLMSAYGVVFAAVFAIPAGIVTARHGRLSGWVFAVANVIQTVPALAMLAVLMLVMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I A+F   +  +  + +  + NI     E  ++  ++ +Q    + +P
Sbjct: 84  --------ANTVITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQVLRMVELP 135

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  +  +       +V +  I    T +   G+G  I       +  AI+ A  
Sbjct: 136 LALSVIMAGVRTA-------LVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAGA 188

Query: 247 TMLGVIFLYDQLL 259
               ++ +   LL
Sbjct: 189 IPTALMAVAADLL 201



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 12/184 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A++  IP GI       +S  +   A ++   PA     +++  +         
Sbjct: 30  AYGVVFAAVFAIPAGIVTARHGRLSGWVFAVANVIQTVPALAMLAVLMLVMGLGANT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +   +   IL N   G     + + E   +  +T ++  R + LP      + G 
Sbjct: 87  -VITALFLYSLLPILRNTHTGIINIEHAYLESGKAMGMTKYQVLRMVELPLALSVIMAGV 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLAL 569
            TA   A   + +      G       GLG  I   +   +    ++ G +      +A 
Sbjct: 146 RTALVIAIGITAIGTFVGAG-------GLGDMIVRGSNATNGTAIILAGAIPTALMAVAA 198

Query: 570 NRFL 573
           +  +
Sbjct: 199 DLLM 202


>gi|168236330|ref|ZP_02661388.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194736570|ref|YP_002115253.1| inner membrane ABC transporter permease YehY [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194712072|gb|ACF91293.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197290541|gb|EDY29896.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 389

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|228477498|ref|ZP_04062134.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           salivarius SK126]
 gi|228250933|gb|EEK10121.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           salivarius SK126]
          Length = 304

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 14/211 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMVIS 79
           ++V  +  ILL   Q+      +  +  I                A    L      ++S
Sbjct: 33  LIVFIVAMILLFVAQKGLATFFVNKVSLIEFLFSGDWSPSEGKFGALPMILGSFVVTLLS 92

Query: 80  LLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGFLTF---TVVYFMNLYPGKV 131
            L    +A  AA      S +    L P ++++  IP + +       VV F+ L  G  
Sbjct: 93  ALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGT 152

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L+  F +F   +  +TF    +L  +PR   E S +   + WQ  W + +  + PG
Sbjct: 153 GFGILSGTFVLFVMILPTVTFMTTDTLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPG 212

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +   ++  M+  +   +A +M+V    VIP 
Sbjct: 213 IFTAVIFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 14/177 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPA 430
             +     + +   +    ++  ++A+   I   I++    P  +  +QP  +LL   P+
Sbjct: 71  PSEGKFGALPMILGSFVVTLLSALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPS 130

Query: 431 NVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            V+         P V        + +    ++  +MI  T   + F       A P  ++
Sbjct: 131 VVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPT---VTFMTTDTLRAVPRHYR 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W+    + L    P   T  I     A+  ++  ++       + T+
Sbjct: 188 EASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|168701488|ref|ZP_02733765.1| phosphate ABC transporter, inner membrane subunit PstC [Gemmata
           obscuriglobus UQM 2246]
          Length = 619

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 68/507 (13%), Positives = 154/507 (30%), Gaps = 69/507 (13%)

Query: 72  MLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIP--ILGFLTFTVVYF 123
            ++  VI++L        AA         R+  +   +L+++ +IP  I GF     +  
Sbjct: 81  TVATSVIAMLVAVPLGVGAAACLSELAPARVRQISSFLLELLAAIPSVIFGFWALEFLAR 140

Query: 124 MNLYPGKVIGA--------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             L P   +           LAA   +    +  +T   +     +PR   E S +   +
Sbjct: 141 RGLAPAFDLLGLRHQSGEGILAAGLVLAVMILPYVTALSFDVCQAVPRSQREGSLALGAT 200

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG------IGSYI 229
            W   W + +P++ PG++    +++       +A  M++     +          I S I
Sbjct: 201 RWHTIWKVVLPYARPGIIAACFLALGRAVGETMAVTMVIGNAQHLDFSATATGDTIPSII 260

Query: 230 ALAIKEQDLL----AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV 285
           A  + E          L  +  +L VI +      R ++ W++K                
Sbjct: 261 AKQLHETTPGTPKRPTLILLGLLLLVITIVMNAAARLLVRWASK---------------- 304

Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345
                       +             +       +   R         + +      +L 
Sbjct: 305 ---------PHLVRTREVELSDAPPPDPAAAAAQVTRARTRAALTDRVMTAVLWGCQVLT 355

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +    ++ G         +          +    ++   +     V L+ +AS+  +P+G
Sbjct: 356 VVPLFLILGYITYKGADKVTAAFFTNLPHERPPGLYHALVGS---VTLVGLASVFAVPIG 412

Query: 406 IWIG------FRPHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLW 451
           +  G       +  + + ++  A+LL   P+ V                        + W
Sbjct: 413 LMTGVLLSEYRKSPLVAPVRFVAELLGGVPSIVIGVFVYALLVSPFWLAPGQKPWGFSAW 472

Query: 452 LSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                +      ++           PN  +E + +   +  +    +++P   P   TG 
Sbjct: 473 AGAFALGVMMLPVVIRSAEEAMRLVPNSLREASFALGASRRQTVLKVVIPAALPAITTGV 532

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTT 537
           + A G     +    + + G  +L  +
Sbjct: 533 LLAVGRIAGETAPLILTARGSQYLAKS 559



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 67/203 (33%), Gaps = 9/203 (4%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
                 R +   ++      +V   + +     +                    L     
Sbjct: 336 RAALTDRVMTAVLWGCQVLTVVPLFLILGYITYKGADKVTAAFFTNLPHERPPGLYHALV 395

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIP-----ILGFLTF 118
            +   +  A V ++    +   L ++ R+   ++ P+    +++  +P     +  +   
Sbjct: 396 GSVTLVGLASVFAVPIGLMTGVLLSEYRK-SPLVAPVRFVAELLGGVPSIVIGVFVYALL 454

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
              +++         +  A  FA+    +  +  S  +++  +P  L E S +   S  Q
Sbjct: 455 VSPFWLAPGQKPWGFSAWAGAFALGVMMLPVVIRSAEEAMRLVPNSLREASFALGASRRQ 514

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS 201
               + +P ++P +   +++++ 
Sbjct: 515 TVLKVVIPAALPAITTGVLLAVG 537


>gi|49082082|gb|AAT50441.1| PA3888 [synthetic construct]
          Length = 241

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS---RRLGMVLVP 102
              +    I      L  Y     + + S+M  +LL       L ++     +   ++  
Sbjct: 23  IHWITPATILHYREDLLFYLQAHLVLVFSSMAAALLVGVPAGILLSRPGMQAQAERLMQ- 81

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           + ++  +IP L  L   +                 AI A+F + +  +  + Y+ L N+ 
Sbjct: 82  VFNVGSTIPPLAVLAIALAIIGIGNGP--------AILALFLASLLPIVRNTYEGLRNVS 133

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             L+E +    ++  Q    + +P ++P +V  + ++++ 
Sbjct: 134 PALKEAATGIGMTPNQVLLRVELPNAVPIIVGGVRVALAL 173



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 8/141 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFP 435
           +++     +  V   +  A ++ +P GI +   G +      +Q    + +  P      
Sbjct: 38  LLFYLQAHLVLVFSSMAAALLVGVPAGILLSRPGMQAQAERLMQ-VFNVGSTIPPLAVLA 96

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           + ++ +       N    L +   +   I+ N   G        KE A+   +T  +   
Sbjct: 97  IALAIIGIG----NGPAILALFLASLLPIVRNTYEGLRNVSPALKEAATGIGMTPNQVLL 152

Query: 496 YIILPGIFPYYVTGAITACGG 516
            + LP   P  V G   A   
Sbjct: 153 RVELPNAVPIIVGGVRVALAL 173


>gi|332093256|gb|EGI98316.1| inner membrane ABC transporter permease protein yehY domain protein
           [Shigella boydii 5216-82]
          Length = 223

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 15  LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 74

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 75  ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESTRAMGMSG 134

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 135 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 187

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 188 AIDLVLLGVIPVIVLAVLTDALF 210



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++    
Sbjct: 19  LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVT 78

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+ G +  P D  E   +  ++G + +
Sbjct: 79  AFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESTRAMGMSGAQRF 138

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ LP   P ++             ++++ +   G       G GA + +     +   
Sbjct: 139 LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDL 191

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    +  +   
Sbjct: 192 VLLGVIPVIVLAVLTDALF 210


>gi|289650138|ref|ZP_06481481.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 217

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 77/205 (37%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ +++L          +   L   L     ++ ++P + 
Sbjct: 9   HLDWAQVLHLTWQHITLVGIAVTLAILVGVPLGVRMTRFPALAGPLQASATVLLTVPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E ++   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +  + D LL
Sbjct: 179 RSDMSMLIVGAVLVSILAIIADLLL 203



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+G+ +   P ++  +Q  A +L  
Sbjct: 7   FSHLDWAQVLHLTWQHITL---VGIAVTLAILVGVPLGVRMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  VPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAAKGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSILAIIADLLL 203


>gi|115523236|ref|YP_780147.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
 gi|115517183|gb|ABJ05167.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
          Length = 272

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+   + I++   +  GI IG  P  ++ +  F  + +  P     P++   +   
Sbjct: 77  ASLERLGAALAISTAAALLFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +       L++ GT   ++ ++       P +    A +   + W+    + +P I P
Sbjct: 137 ETSK----IALIVIGTLPGMIRDLAMRVFELPREQLIKAQTLGASTWQIALRVAVPQILP 192

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +       G AW   I +E  +        +GLG  I       +   ++  V+ +  
Sbjct: 193 RLIDSLRMQLGPAWLFLIAAEAIA------SDSGLGYRIFLVRRYLAMDVIIPYVIWITL 246

Query: 565 FVLALN---RFLWHPLYLY 580
               ++   R L    + +
Sbjct: 247 LAFLMDFALRLLQRKAFPW 265



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 14/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +  R+ +A+ IS     ++  +         +L   + +   +P L  L    
Sbjct: 71  MWADTWASLERLGAALAISTAAALLFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILF 130

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +             E + I  I    +  M   +   +  +PR+    +++   S WQ  
Sbjct: 131 IVMGLG--------ETSKIALIVIGTLPGMIRDLAMRVFELPREQLIKAQTLGASTWQIA 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + VP  +P L+ ++ M +   W F++A+E I          G+G  I L  +   +  
Sbjct: 183 LRVAVPQILPRLIDSLRMQLGPAWLFLIAAEAIASDS------GLGYRIFLVRRYLAMDV 236

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+  ++ +  + FL D  L
Sbjct: 237 IIPYVIWITLLAFLMDFAL 255


>gi|297155381|gb|ADI05093.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces bingchenggensis BCW-1]
          Length = 259

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 85/234 (36%), Gaps = 17/234 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I D +   L      ++   T L  L   +++     V  T  ++ R +    +
Sbjct: 37  LPRPSQIFDALRTQLADPLFWRHLKVTVLESLYGFLLAAGAALVLGTAISQMRLIERTFM 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P +   Q++P        VV+F      KV+ A + A F         M  ++ + L + 
Sbjct: 97  PYIVAFQTVPKAALAPLFVVWFGFGMASKVVMAAVIAFF--------PMLVNVVEGLRSA 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D  ++   F    ++ F  + +P ++P +   + + +       V  E I   +    
Sbjct: 149 DADRVQMLTVFGAGKFEVFTMVRLPSALPFIFAGLEIGVVFSILGAVVGEFIGAKE---- 204

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNKFRL 272
             G+G  +       D+  +   ++ +  +  +     +L  R  + W+ + R+
Sbjct: 205 --GLGYLLLQTNYNFDIAGMFAVLVVLSVLGLIAHFIIRLAQRRFVFWTQESRV 256



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 13/180 (7%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            I     I     P+       P     PL V    +   +  +  +++      + +L 
Sbjct: 84  AISQMRLIERTFMPYIVAFQTVPKAALAPLFVVWFGFGMASKVVMAAVI----AFFPMLV 139

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           NV+ G  +   D  ++ + F    +  +  + LP   P+   G       +   ++V E 
Sbjct: 140 NVVEGLRSADADRVQMLTVFGAGKFEVFTMVRLPSALPFIFAGLEIGVVFSILGAVVGEF 199

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA---LNRFLWHPLYLYGTR 583
                      GLG  + ++        +   ++++    L    + R        +   
Sbjct: 200 IG------AKEGLGYLLLQTNYNFDIAGMFAVLVVLSVLGLIAHFIIRLAQRRFVFWTQE 253


>gi|163735197|ref|ZP_02142633.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
 gi|161391655|gb|EDQ15988.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
          Length = 309

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 4/167 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L   +I      + A     SR +   ++P     Q+IPIL  
Sbjct: 99  TSKRSLVYHGWVTLSATLLGFIIGTGLGILLAVGIVYSRTMDKSVMPWAITSQTIPILAL 158

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + + +  F    + +   M + L +      ++ R++  S
Sbjct: 159 APMIIVMLGAIGIQGLLPKSVISAYLSF----FPVVVGMVKGLRSPDAMQLDLLRTYSAS 214

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             Q FW L +P S+P L  ++ + +S      +  E+          
Sbjct: 215 PSQGFWKLRLPASVPYLFASLKIGISAALVGAIVGELPTGARAGFGA 261



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 62/159 (38%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++  II + + I + + I +   +   + P+A      P     P++
Sbjct: 103 SLVYHGWVTLSATLLGFIIGTGLGILLAVGIVYSRTMDKSVMPWAITSQTIPILALAPMI 162

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  S++  + + + ++  ++ G  +      ++  ++  +  + +  +
Sbjct: 163 IVMLGAIGIQGLLPKSVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKL 222

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            LP   PY           A   +IV E+ +        
Sbjct: 223 RLPASVPYLFASLKIGISAALVGAIVGELPTGARAGFGA 261


>gi|144900961|emb|CAM77825.1| ABC transporter, permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 273

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 71/183 (38%), Gaps = 13/183 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +GI  G  P++ + + PF  +L+  P     P++        L+      +L++ G   +
Sbjct: 98  LGIGTGLIPYVRAGLSPFIAVLSLIPPMAILPILFIVFGLDELSK----VVLIVIGIAPF 153

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++ ++     A P++    A +   + W+    ++LP ++P  +     + G AW   I 
Sbjct: 154 LIRDLALRVEAIPSELVIKAQTLGASTWQIITRLVLPNVWPKLLDAVRLSLGPAWLFLIS 213

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580
           +E  +         GLG  I       +   ++  V  +      ++   R +   L  +
Sbjct: 214 AEAIA------AQDGLGYRIFLVRRYLAMDVILPYVAWITLLAFCMDWALRAMNRRLCPW 267

Query: 581 GTR 583
             R
Sbjct: 268 LAR 270



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 14/175 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           +          +   L P + ++  IP +  L    + F           EL+ +  I  
Sbjct: 97  ILGIGTGLIPYVRAGLSPFIAVLSLIPPMAILPILFIVFGLD--------ELSKVVLIVI 148

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +   +   +  IP +L   +++   S WQ    L +P   P L+  + +S+   W
Sbjct: 149 GIAPFLIRDLALRVEAIPSELVIKAQTLGASTWQIITRLVLPNVWPKLLDAVRLSLGPAW 208

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            F++++E I   D      G+G  I L  +   +  IL  +  +  + F  D  L
Sbjct: 209 LFLISAEAIAAQD------GLGYRIFLVRRYLAMDVILPYVAWITLLAFCMDWAL 257


>gi|237712826|ref|ZP_04543307.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408817|ref|ZP_06085362.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22]
 gi|294648189|ref|ZP_06725729.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CC 2a]
 gi|294810767|ref|ZP_06769415.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229447154|gb|EEO52945.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353028|gb|EEZ02123.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22]
 gi|292636464|gb|EFF54942.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CC 2a]
 gi|294442100|gb|EFG10919.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 398

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPITILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPIT 339


>gi|161502688|ref|YP_001569800.1| hypothetical protein SARI_00735 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864035|gb|ABX20658.1| hypothetical protein SARI_00735 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 388

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 180 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 239

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 240 GLVKQFPWLATFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 299

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 300 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 352

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 353 AIDLVLLGVIPVIALALVIDALF 375



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 128 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 187

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 188 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 245

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 246 PWLATFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 305

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 306 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 358

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    L ++   
Sbjct: 359 LGVIPVIALALVIDALF 375


>gi|153854854|ref|ZP_01996077.1| hypothetical protein DORLON_02083 [Dorea longicatena DSM 13814]
 gi|149752556|gb|EDM62487.1| hypothetical protein DORLON_02083 [Dorea longicatena DSM 13814]
          Length = 277

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 84/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I++++ + +  HS+  +   T      +  + +  + ++A L   S  L  +L P
Sbjct: 64  SSPSKIMNVLLLMISDHSIFLHLGVTLYETFVSFFLVIFVSILFAILLWYSNNLSEILEP 123

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+        ++     AIF            ++Y S  +  
Sbjct: 124 YLVVLNSLPKSALAPLLIVWLGATKTTIIVTGMSVAIFGSI--------LNLYTSFRSTD 175

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               ++  + R +       + +P+S+P ++ NM +++      V+  E +   +     
Sbjct: 176 PGKIKLIYTLRGNHLHVLTKVILPYSIPAIISNMKVNIGLCLVGVIIGEFLAAKE----- 230

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  + +   +  +L ++  +         L+
Sbjct: 231 -GLGYLIIYSSQVFKMDWLLMSICILCVFAIFLYALI 266



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++   V   +   + I   I + +  ++S  ++P+  +L + P +   PL+
Sbjct: 81  SIFLHLGVTLYETFVSFFLVIFVSILFAILLWYSNNLSEILEPYLVVLNSLPKSALAPLL 140

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+     +      ++  +           +
Sbjct: 141 IVWLGATKTTIIVTGMSVAIFGS----ILNLYTSFRSTDPGKIKLIYTLRGNHLHVLTKV 196

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ILP   P  ++      G      I+ E  +         GLG  I  S++      +++
Sbjct: 197 ILPYSIPAIISNMKVNIGLCLVGVIIGEFLA------AKEGLGYLIIYSSQVFKMDWLLM 250

Query: 558 GVLIMCCFVLALNRFL 573
            + I+C F + L   +
Sbjct: 251 SICILCVFAIFLYALI 266


>gi|99081335|ref|YP_613489.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99037615|gb|ABF64227.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 281

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 86/270 (31%), Gaps = 10/270 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F + +         T            + L         + I W  +V G+ + +     
Sbjct: 5   FLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       +  +      T+ +  +   +I         I +     +   + P   
Sbjct: 65  PSLIAERFAASLPILWADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGN 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F     +L N +AG        +++ 
Sbjct: 125 FVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAGLRETDQMQRDLM 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+    + LP   P+   G   +   A   +IV+E          T G+G  I
Sbjct: 181 RTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGS-----PTVGMGFRI 235

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S  + +   V   +++           +
Sbjct: 236 STSVGQLALDMVWAEIVVAALAGSLFYGLV 265



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 96/246 (39%), Gaps = 16/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   ++   ++  L   +     P  I +    +L +  L    S+T L+  L
Sbjct: 35  LVPAIFGVTILIVWELLVRGLEVPLVILPAPSLIAERFAASLPI--LWADFSQTILKGAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              VI     F+ A L  +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 93  GGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         M  +    L    +   ++ R++  S WQ    L +P ++P + 
Sbjct: 153 VVVMVFF--------PMLVNTVAGLRETDQMQRDLMRTYAASYWQSLIKLRLPAALPFVF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +      + +E         P  G+G  I+ ++ +  L  +   ++       
Sbjct: 205 NGLKISTTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALAGS 259

Query: 254 LYDQLL 259
           L+  L+
Sbjct: 260 LFYGLV 265


>gi|327388943|gb|EGE87291.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA04375]
          Length = 238

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|254485699|ref|ZP_05098904.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseobacter sp. GAI101]
 gi|214042568|gb|EEB83206.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseobacter sp. GAI101]
          Length = 288

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  ++  T    L    +  +   + A     +R 
Sbjct: 59  LPAPHQVAAEIWETTVLKNITSKRSLVYHSWVTLSATLLGFGLGTVLGTLLAVGIVFNRT 118

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M 
Sbjct: 119 MDMSVMPWVIASQTIPILAIAPMIIVVLNAVGISGLLPKAMISMYLSF----FPVVVGMV 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   +  R++  S  Q FW L +P SMP    ++ ++M+      +  E+   
Sbjct: 175 KGLRSPDQMQLDQMRTWHASASQTFWRLRLPASMPYFFTSLKIAMAASLVGAIVGEL--- 231

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 232 --PTGAVAGLGARLLAGSYYGQTIQIW 256



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 74/179 (41%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++   + +++   + + I F   +   + P+       P     P++
Sbjct: 83  SLVYHSWVTLSATLLGFGLGTVLGTLLAVGIVFNRTMDMSVMPWVIASQTIPILAIAPMI 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++ ++ + + ++  ++ G  +      +   ++H +  + +  +
Sbjct: 143 IVVLNAVGISGLLPKAMISMYLSFFPVVVGMVKGLRSPDQMQLDQMRTWHASASQTFWRL 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY+ T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 203 RLPASMPYFFTSLKIAMAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIW 256


>gi|324114452|gb|EGC08421.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 385

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  ++V +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGSVVPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IP D+ E + +  L+G
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPHDVLESATAMGLNG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLIDALF 372



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 94/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +       ++  +  +   QDV        +T+ 
Sbjct: 125 DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNALSLLKEYANRQDVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+G+W  F       I     ++   P+   F L+++ ++      
Sbjct: 185 --FGSVVPALVIGVPLGVWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 242

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P+D  E A++  + G + + +
Sbjct: 243 PWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPHDVLESATAMGLNGAQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAIDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVLAVLIDALF 372


>gi|111657986|ref|ZP_01408692.1| hypothetical protein SpneT_02000842 [Streptococcus pneumoniae
           TIGR4]
 gi|148998000|ref|ZP_01825513.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP11-BS70]
 gi|149003061|ref|ZP_01827970.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP14-BS69]
 gi|221232900|ref|YP_002512054.1| ABC transporter permease [Streptococcus pneumoniae ATCC 700669]
 gi|303259686|ref|ZP_07345662.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP-BS293]
 gi|303262153|ref|ZP_07348098.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP14-BS292]
 gi|303266103|ref|ZP_07351997.1| ABC transporter, permease protein [Streptococcus pneumoniae BS457]
 gi|303269952|ref|ZP_07355689.1| ABC transporter, permease protein [Streptococcus pneumoniae BS458]
 gi|147756010|gb|EDK63053.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP11-BS70]
 gi|147758802|gb|EDK65798.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP14-BS69]
 gi|220675362|emb|CAR69961.1| ABC transporter, permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|301800934|emb|CBW33593.1| ABC transporter, permease protein [Streptococcus pneumoniae OXC141]
 gi|301802863|emb|CBW35641.1| ABC transporter, permease protein [Streptococcus pneumoniae INV200]
 gi|302636793|gb|EFL67283.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639238|gb|EFL69697.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP-BS293]
 gi|302640517|gb|EFL70927.1| ABC transporter, permease protein [Streptococcus pneumoniae BS458]
 gi|302644407|gb|EFL74660.1| ABC transporter, permease protein [Streptococcus pneumoniae BS457]
 gi|332071641|gb|EGI82134.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA17570]
 gi|332198612|gb|EGJ12695.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA41317]
 gi|332198824|gb|EGJ12906.1| binding--dependent transport system inner membrane component family
           protein [Streptococcus pneumoniae GA47368]
          Length = 238

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|315500620|ref|YP_004089422.1| binding-protein-dependent transport systems inner membrane
           component [Asticcacaulis excentricus CB 48]
 gi|315418632|gb|ADU15271.1| binding-protein-dependent transport systems inner membrane
           component [Asticcacaulis excentricus CB 48]
          Length = 272

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 79/226 (34%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL  I         +   P  L    L       +  R+   + ++     V        
Sbjct: 45  LLPTIDRMAESFGRIAFYPDALTGKVLVLADTVASLQRLGIGIGVATAIALVLGLALGVL 104

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P++  +  IP +  L    + F           E + I  I       M   
Sbjct: 105 PLARATLAPLIATIAVIPPIAILPILFIIFGLG--------ETSKIVLIAIGIAPLMVRD 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   +  +P +    +++   S WQ    + +P ++P L+ ++ +S+   W F++++E I
Sbjct: 157 LAAHVAALPNEQILKAQTLGASTWQLTLRVALPQALPRLIDSLRLSIGPAWVFLISAEAI 216

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  IL  ++ +  +  L D +L
Sbjct: 217 A------SDVGLGYRIFLVRRYLSMDIILPYVVWIALLALLMDIVL 256



 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 76/201 (37%), Gaps = 10/201 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
               + V+     ++ R+ + I +A+ I + +G+ +G  P   + + P    +A  P   
Sbjct: 66  LTGKVLVLADTVASLQRLGIGIGVATAIALVLGLALGVLPLARATLAPLIATIAVIPPIA 125

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++         +      +L+  G    ++ ++ A  +A PN+    A +   + W+
Sbjct: 126 ILPILFIIFGLGETSK----IVLIAIGIAPLMVRDLAAHVAALPNEQILKAQTLGASTWQ 181

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P  +     + G AW   I +E  +         GLG  I       S 
Sbjct: 182 LTLRVALPQALPRLIDSLRLSIGPAWVFLISAEAIA------SDVGLGYRIFLVRRYLSM 235

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             ++  V+ +    L ++  L
Sbjct: 236 DIILPYVVWIALLALLMDIVL 256


>gi|148508199|gb|ABQ75988.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [uncultured haloarchaeon]
          Length = 249

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 21/237 (8%)

Query: 24  AFVLVIGIINILLHGIQETTV----PRDIVDIVPITLDVH---SLPQYASRTTLRMLSAM 76
             V+++ +      G +        P  ++  +P+ L      +L  +  ++ LR+LSA 
Sbjct: 9   WVVIILTLFLTWAIGGRIMPATLPGPAAVIGRIPLLLVPGPGGNLMTHLVQSLLRVLSAG 68

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           + +L+   V   + A+ R + + + P L +  +IP L  +  T+V F          +E 
Sbjct: 69  ITALILATVIGIMMAQQRSVELAISPWLPLAMTIPTLVVVLVTMVLFQ--------FSEA 120

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A I A         T ++++    +  D+  V+ ++  S W     + +P   P +  + 
Sbjct: 121 AVITATVLVTTPYATVTVWEGARTVDNDILSVAAAYDASSWAILREIYLPAIAPAVFGSA 180

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
               S  W  VV +E   +        G+G+       + DL A+L A+   + V+ 
Sbjct: 181 RYLASMVWKVVVLAETFGMSV------GMGAVFRFWYGQGDLEAVLAALFVFVFVMV 231



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L       +    +      IG I           ++     ++ RV+   I A I+  
Sbjct: 17  FLTWAIGGRIMPATLPGPAAVIGRIPLLLVPGPGGNLMTHLVQSLLRVLSAGITALILAT 76

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI +  +  +   I P+  L    P  V   + +    +          L+    T  
Sbjct: 77  VIGIMMAQQRSVELAISPWLPLAMTIPTLVVVLVTMVLFQFSEAAVITATVLV----TTP 132

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y    V  GA    ND   VA+++  + W   R I LP I P     A       W   +
Sbjct: 133 YATVTVWEGARTVDNDILSVAAAYDASSWAILREIYLPAIAPAVFGSARYLASMVWKVVV 192

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E          + G+GA       +G    V+  + +    ++ +
Sbjct: 193 LAETFG------MSVGMGAVFRFWYGQGDLEAVLAALFVFVFVMVGI 233


>gi|89901883|ref|YP_524354.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
 gi|89346620|gb|ABD70823.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
          Length = 294

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 10/184 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +TM   ++     S+  I  GI +G    ++     + +++ + P  V  P+ +      
Sbjct: 97  VTMEESLLGFFSGSVAGIVAGIALGRNRMLADVFSIYIKVINSVPRVVLAPIFIMIFGLG 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +++ F        N   G      +    A      GW+  R +++P    
Sbjct: 157 LTSKVALSFVMVFFVVF----SNAFQGVVEADRNLLANAQILGARGWQLTRSVVIPSAMS 212

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +       + G A   +IV E            G+G  I  +        +   ++I+  
Sbjct: 213 WIFASLHVSFGFAIVGAIVGEFVG------ARYGIGLLINVAKGSFDAAGMYAAIVIIMV 266

Query: 565 FVLA 568
             LA
Sbjct: 267 VALA 270



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 14/200 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L  +   T    L       +   V      ++R L  V    + ++ S+P + 
Sbjct: 85  GTSEGPLWYHLWVTMEESLLGFFSGSVAGIVAGIALGRNRMLADVFSIYIKVINSVPRVV 144

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                ++ F      KV  + +   F +F+        + +Q +    R+L   ++    
Sbjct: 145 LAPIFIMIFGLGLTSKVALSFVMVFFVVFS--------NAFQGVVEADRNLLANAQILGA 196

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            GWQ    + +P +M  +  ++ +S     F +V +   +VG+ V    GIG  I +A  
Sbjct: 197 RGWQLTRSVVIPSAMSWIFASLHVSFG---FAIVGA---IVGEFVGARYGIGLLINVAKG 250

Query: 235 EQDLLAILYAMLTMLGVIFL 254
             D   +  A++ ++ V   
Sbjct: 251 SFDAAGMYAAIVIIMVVALA 270


>gi|239980343|ref|ZP_04702867.1| putative ABC transporter permease protein [Streptomyces albus
           J1074]
 gi|291452206|ref|ZP_06591596.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291355155|gb|EFE82057.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 253

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 9/170 (5%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++IA ++ +P+ +W+G      +     + +  A P      LV+  ++    +  +   
Sbjct: 38  LVIACLVALPLALWLGHLGKGGTLAVNISNVGRAVPTLAV--LVLLSLTPLGAHEGVPTL 95

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + ++      +L N   G         E A    ++GW+ +R + LP   P  +TG  TA
Sbjct: 96  IALVLFAVPPLLTNAYLGMREVDRPVVEAARGMGMSGWQLFRRVELPLAQPLLMTGLRTA 155

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                  + ++ +A  G       GLG  I       + P+V+ G  ++ 
Sbjct: 156 GVQVVATATLAAMAGEG-------GLGRIITAGFGLSNTPQVIAGAFLVA 198



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 13/176 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +VI+ L     A       + G + V I ++ +++P L  L    +  +  + G    
Sbjct: 36  VCLVIACLVALPLALWLGHLGKGGTLAVNISNVGRAVPTLAVLVLLSLTPLGAHEG---- 91

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +  + A+    V  +  + Y  +  + R + E +R   +SGWQ F  + +P + P L+
Sbjct: 92  --VPTLIALVLFAVPPLLTNAYLGMREVDRPVVEAARGMGMSGWQLFRRVELPLAQPLLM 149

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
             +  +  G      A+   + G+      G+G  I       +   ++     + 
Sbjct: 150 TGLRTA--GVQVVATATLAAMAGE-----GGLGRIITAGFGLSNTPQVIAGAFLVA 198


>gi|17988011|ref|NP_540645.1| glycine betaine/L-proline transport system permease protein proW
           [Brucella melitensis bv. 1 str. 16M]
 gi|17983755|gb|AAL52909.1| glycine betaine/l-proline transport system permease protein prow
           [Brucella melitensis bv. 1 str. 16M]
          Length = 233

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 17/210 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILD 105
           +    P+  D  +L     +    +  A   S L     A    + +      +   +++
Sbjct: 20  VDTGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVN 79

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I Q+ P +  L  TV  F           +   + A+F   +  +  +    L ++P  +
Sbjct: 80  IGQTFPPVAVLALTVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPI 131

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +R   ++G Q+ + + +P +MP ++  + +S   G         +           +
Sbjct: 132 VEAARGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------L 184

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G  I   +   +L  +L   L +  +  L 
Sbjct: 185 GEVIIAGLISNNLAFVLEGGLVVAALAILI 214



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF----AQLLAAFPA 430
           D   ++ L    +  V +    +++I + + I++  R        P       +   FP 
Sbjct: 29  DRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAE--FLPLSRSLVNIGQTFPP 86

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L V    +      + L L  +      I  N + G ++ P    E A    +TG
Sbjct: 87  VAVLALTVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTG 142

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + +P   P  + G   +      A I    A+ G      T LG  I       
Sbjct: 143 MQRLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISN 195

Query: 551 SFPEVVLGVLIMCCFVLAL 569
           +   V+ G L++    + +
Sbjct: 196 NLAFVLEGGLVVAALAILI 214


>gi|226307618|ref|YP_002767578.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229493747|ref|ZP_04387529.1| ABC amino acid transport system, permease protein [Rhodococcus
           erythropolis SK121]
 gi|226186735|dbj|BAH34839.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229319347|gb|EEN85186.1| ABC amino acid transport system, permease protein [Rhodococcus
           erythropolis SK121]
          Length = 229

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 11/211 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  +IV+   +     +       ++  V+ + ++++I +P+G+ IG        +    
Sbjct: 7   AWDFIVDPGNWSGDTGIGTRILQHLWYSVLAVALSAVIAVPIGLLIGHLRRGEIVVVSLV 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P       +V  +    + P L L +L I      +L    AG ++      E 
Sbjct: 67  NALRSLPTLGLLTFLVLLMGLGVMPPILALVILGI----PPLLAGTYAGIASVDRGVVEA 122

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + +P   P  + G   A       + V+   + G       GLG Y
Sbjct: 123 ARAMGMTELQVLFRVEIPNALPLILGGLRNATLQVIATATVAAYVNLG-------GLGRY 175

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +  VV+G +++    L ++  L
Sbjct: 176 IFDGLALYKYDRVVVGAILVAVVALVVDGLL 206



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 85/202 (42%), Gaps = 17/202 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +     + A+ +S +       L    RR  +V+V +++ ++S+P LG LTF V+    
Sbjct: 28  LQHLWYSVLAVALSAVIAVPIGLLIGHLRRGEIVVVSLVNALRSLPTLGLLTFLVLLMGL 87

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     +  I A+    +  +    Y  + ++ R + E +R+  ++  Q  + + +
Sbjct: 88  GV--------MPPILALVILGIPPLLAGTYAGIASVDRGVVEAARAMGMTELQVLFRVEI 139

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +          V+A+  +      + L G+G YI   +       ++   
Sbjct: 140 PNALPLILGGLR----NATLQVIATATVAA---YVNLGGLGRYIFDGLALYKYDRVVVGA 192

Query: 246 LTMLGVIFLYDQLLFRPMIVWS 267
           + +  V  + D LL   ++VW+
Sbjct: 193 ILVAVVALVVDGLLA--LVVWA 212


>gi|148553709|ref|YP_001261291.1| substrate-binding region of ABC-type glycine betaine transport
           system [Sphingomonas wittichii RW1]
 gi|148498899|gb|ABQ67153.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Sphingomonas wittichii RW1]
          Length = 517

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 11/196 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +     L   A    L    A+++++      A +AA  RR+   L+ ++ +MQ+IP L 
Sbjct: 5   STGWGELAGLAQAHLLLSGCAVILAVAAGVPLAIVAAHGRRVRGPLLAVVGLMQTIPGLA 64

Query: 115 FLTFTVVYFMNLYPGKVIGA----ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
            L       + L     +       L A+ A+    +  +  +   ++  I   L+E + 
Sbjct: 65  LLALFYPLLLVLGRASGLAIPALGFLPALLALCVYALLPILRNGVAAIDGIDPALKEAAD 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++  QK W + +P   P ++  +  +    W    A+       T I  P +G  I 
Sbjct: 125 GVGMTRRQKLWLVELPLGAPVILAGIRTA--AVWTIGTATLA-----TTIGQPSLGDLIF 177

Query: 231 LAIKEQDLLAILYAML 246
             ++ +D   +L    
Sbjct: 178 SGLQTEDWQRVLIGCF 193



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 15/195 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
                  +  L    +      +I+A    +P+ I       +   +     L+   P  
Sbjct: 4   GSTGWGELAGLAQAHLLLSGCAVILAVAAGVPLAIVAAHGRRVRGPLLAVVGLMQTIPGL 63

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW--------YILFNVIAGASAFPNDFKEVA 483
               L    +        L +  L                IL N +A         KE A
Sbjct: 64  ALLALFYPLLLVLGRASGLAIPALGFLPALLALCVYALLPILRNGVAAIDGIDPALKEAA 123

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +T  +    + LP   P  + G  TA       + ++         +    LG  I
Sbjct: 124 DGVGMTRRQKLWLVELPLGAPVILAGIRTAAVWTIGTATLA-------TTIGQPSLGDLI 176

Query: 544 AESTEKGSFPEVVLG 558
               +   +  V++G
Sbjct: 177 FSGLQTEDWQRVLIG 191


>gi|29346733|ref|NP_810236.1| putative ABC transporter permease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338630|gb|AAO76430.1| putative ABC transporter permease protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 398

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                +   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYEALFLLGVVLFFITLI 381



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAPLFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVVVPLIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 SMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|116662321|ref|YP_829375.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|325965548|ref|YP_004243452.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
 gi|116613085|gb|ABK05794.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|323471635|gb|ADX75318.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 266

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T+  ++V   I  ++ +P+G+++   P     ++PF     A P  +F+P++++ + 
Sbjct: 74  AARTLTTILVAFTIGLVLGVPLGVFLWRVPAAGRILEPFIVTGYAMPTLLFYPVLLAVMG 133

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                    + ++    +   I    +   +A      ++A+S   +  +++  ++ P  
Sbjct: 134 LNAG----PIIVIAASMSLIPIALTTMVALNAIKPILHKLANSVSASPRQYYLKVLFPAA 189

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    G       A   ++  E        L + G+G        + +  ++   + ++
Sbjct: 190 TPLIFPGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGFYYRELNTADMWAYIAVV 243

Query: 563 CCFVLALNRFLWHPLYLYGTRCLR 586
               + +N  L      +  + +R
Sbjct: 244 IVLSVLVNSVL-----TWLEKRIR 262



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 81/252 (32%), Gaps = 15/252 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASR 67
             + R        ++  V+V+ +        +   VP   +     ++       Q A+R
Sbjct: 17  AMVPRSSLVRWAIIVTLVVVLELTTRTGMISRSLMVPPSEILTRLASIVPTEQFGQDAAR 76

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L A  I L+          +    G +L P +    ++P L F    +       
Sbjct: 77  TLTTILVAFTIGLVLGVPLGVFLWRVPAAGRILEPFIVTGYAMPTLLFYPVLLAVMGLNA 136

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      I    +  +  +  +   +L  I   L +++ S   S  Q +  +  P 
Sbjct: 137 GP--------IIVIAASMSLIPIALTTMVALNAIKPILHKLANSVSASPRQYYLKVLFPA 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +   + +         VA E I      +   G+G       +E +   +   +  
Sbjct: 189 ATPLIFPGVKLGFIYAVIGTVAMEFI------LASQGVGFRAGFYYRELNTADMWAYIAV 242

Query: 248 MLGVIFLYDQLL 259
           ++ +  L + +L
Sbjct: 243 VIVLSVLVNSVL 254


>gi|126731586|ref|ZP_01747392.1| ABC transporter, permease protein [Sagittula stellata E-37]
 gi|126708122|gb|EBA07182.1| ABC transporter, permease protein [Sagittula stellata E-37]
          Length = 282

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               ++D    I  G ++        +I ++      + +    ++   + P    +AA 
Sbjct: 76  TGLLWRDFTQTILKGALS------GYVIGNVAAFLTALLVDRSDYLRRGLLPLGNFMAAL 129

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P++V    +   +    + L++ F     +L N +AG S      +++  ++  
Sbjct: 130 PIVGTAPILVMWFGFGWQSKAAVVVLMVYF----PMLVNTVAGLSETTAMQRDLMKTYAA 185

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T  +    + LP   P+   G       A   +IV+E          T GLG  I+ S  
Sbjct: 186 TWGQTLWTLRLPAALPFIFNGLKITSTLALVGAIVAEFFGS-----PTLGLGFRISTSIG 240

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
           +     V   +++           +
Sbjct: 241 QLDLAMVWSAIVVAALAGTGFYGLI 265



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 100/256 (39%), Gaps = 24/256 (9%)

Query: 23  LAFVLVIG--IINILLHGIQETTVPRDIVDIVP-----ITLDVHSLPQYASRTTLR-MLS 74
           +A  L+ G  ++ +    ++   VP  I+            +   L +  ++T L+  LS
Sbjct: 34  IAVPLIFGATLLAMWELIVRGAEVPTVILPPPSDIAERFAGNTGLLWRDFTQTILKGALS 93

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             VI  +  F+ A L  +S  L   L+P+ + M ++PI+G     V++F   +  K    
Sbjct: 94  GYVIGNVAAFLTALLVDRSDYLRRGLLPLGNFMAALPIVGTAPILVMWFGFGWQSKAA-- 151

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +     + M  +    L        ++ +++  +  Q  W L +P ++P +  
Sbjct: 152 ------VVVLMVYFPMLVNTVAGLSETTAMQRDLMKTYAATWGQTLWTLRLPAALPFIFN 205

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-- 252
            + ++ +      + +E         P  G+G  I+ +I + DL  +  A++        
Sbjct: 206 GLKITSTLALVGAIVAEFFGS-----PTLGLGFRISTSIGQLDLAMVWSAIVVAALAGTG 260

Query: 253 -FLYDQLLFRPMIVWS 267
            +    L+ + M  W 
Sbjct: 261 FYGLITLIEKRMTFWH 276


>gi|237718414|ref|ZP_04548895.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293371417|ref|ZP_06617848.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CMC 3f]
 gi|299149069|ref|ZP_07042131.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_23]
 gi|229452347|gb|EEO58138.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292633614|gb|EFF52172.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           ovatus SD CMC 3f]
 gi|298513830|gb|EFI37717.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_23]
          Length = 398

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|226309435|ref|YP_002769395.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226188552|dbj|BAH36656.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 273

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 10/167 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++ R+++ ++IA I  I +G+ +G  P ++  I+P    +   P  V    ++       
Sbjct: 77  SIGRLLLGLLIAWIAGITLGVLLGRIPLVAMIIEPILHFMRGLPGPV----LLPLALVLV 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     L+ FG  W +LFN  +     P  F++      I+       +ILP     
Sbjct: 133 GTGSAMRVGLIAFGAVWPVLFNTYSAVRQVPQGFEDAGRVSRISRSSMLFRVILPTASSG 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              G   +        I SE+      +  + G+G  ++++     F
Sbjct: 193 IFAGIKVSTSLGIILLIASEL------YAASNGIGFGLSQAQRSFEF 233



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 75/182 (41%), Gaps = 14/182 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             +  R+L  ++I+ +       L  +   + M++ PIL  M+ +P            + 
Sbjct: 75  LPSIGRLLLGLLIAWIAGITLGVLLGRIPLVAMIIEPILHFMRGLPG--------PVLLP 126

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L    V       +  I    VW + F+ Y ++  +P+  E+  R  R+S     + + +
Sbjct: 127 LALVLVGTGSAMRVGLIAFGAVWPVLFNTYSAVRQVPQGFEDAGRVSRISRSSMLFRVIL 186

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +  G+   + +S S G   ++ASE+    +      GIG  ++ A +  + L +   +
Sbjct: 187 PTASSGIFAGIKVSTSLGIILLIASELYAASN------GIGFGLSQAQRSFEFLTMWSFI 240

Query: 246 LT 247
           + 
Sbjct: 241 VA 242


>gi|153876892|ref|ZP_02003980.1| Glycine betaine transport system permease protein [Beggiatoa sp.
           PS]
 gi|152066643|gb|EDN66019.1| Glycine betaine transport system permease protein [Beggiatoa sp.
           PS]
          Length = 114

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +          +  +P +L E + +F  + +QK   +  P ++P ++  +  ++      
Sbjct: 1   MPPAIRLTCLGIKQVPTELIEAADAFGSTRFQKLMKVQFPLAIPTIMAGINQTIMLALSM 60

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           VV + MI  G       G+G  +  AI+  +      A + ++ +  + D++
Sbjct: 61  VVIAAMIGAG-------GLGGEVWKAIQRLEAGMGFQAGIAIVILAMILDRI 105



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 7/105 (6%)

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G    P +  E A +F  T ++    +  P   P  + G       A +  +++ + 
Sbjct: 8   TCLGIKQVPTELIEAADAFGSTRFQKLMKVQFPLAIPTIMAGINQTIMLALSMVVIAAMI 67

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G       GLG  + ++ ++          + +    + L+R 
Sbjct: 68  GAG-------GLGGEVWKAIQRLEAGMGFQAGIAIVILAMILDRI 105


>gi|90418406|ref|ZP_01226318.1| permease protein, ABC-type nitrate/sulfonate/taurine/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90338078|gb|EAS51729.1| permease protein, ABC-type nitrate/sulfonate/taurine/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 316

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 9/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L   +I      + A     SR L   L+P +   Q+IPIL   
Sbjct: 108 SPRSLLYHAWVTLSSTLLGFLIGTALGVLLAVGILNSRTLDKSLMPWIIASQTIPILAIA 167

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V   ++    ++   + + +  F    + +   M + L +    L ++  ++  S 
Sbjct: 168 PMVIVVLNSVGVTGLLPKAIISTYLSF----FPVAVGMVKGLRSPDAMLIDLMHTYSASR 223

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P SMP L  +M ++++      +  E+         + G+G+ +       
Sbjct: 224 RQTLVKLRWPASMPFLFTSMKVAVAAALVGAIVGEL-----PTGAVAGLGARLLAGSYYG 278

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
             + I  A++    +  +   L+
Sbjct: 279 QTIQIWSALVAAAIMAGVLVWLI 301



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 71/199 (35%), Gaps = 5/199 (2%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                   +++   +T+   ++  +I + + + + + I     +   + P+       P 
Sbjct: 104 VKPSSPRSLLYHAWVTLSSTLLGFLIGTALGVLLAVGILNSRTLDKSLMPWIIASQTIPI 163

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+V+  ++   +   L  +++  + + + +   ++ G  +      ++  ++  + 
Sbjct: 164 LAIAPMVIVVLNSVGVTGLLPKAIISTYLSFFPVAVGMVKGLRSPDAMLIDLMHTYSASR 223

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    +  P   P+  T    A   A   +IV E+ +         GLGA +   +  G
Sbjct: 224 RQTLVKLRWPASMPFLFTSMKVAVAAALVGAIVGELPTGA-----VAGLGARLLAGSYYG 278

Query: 551 SFPEVVLGVLIMCCFVLAL 569
              ++   ++        L
Sbjct: 279 QTIQIWSALVAAAIMAGVL 297


>gi|294633935|ref|ZP_06712492.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. e14]
 gi|292830187|gb|EFF88539.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sp. e14]
          Length = 280

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 17/207 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T   V+    +       +G+ +G  P +   ++P    +   P     PL +      
Sbjct: 79  VTAIEVLAGFGLGVAAGTVMGLVLGSFPLLGRVLEPLVAAVNGIPKIALAPLFLLFFGIG 138

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                     + + G  + + +N+  G      +  EV             Y+ LP +  
Sbjct: 139 Q----WSKITIAMTGVAFVVFYNIYLGLRLRERELVEVVQVMGGRRQHVLGYVTLPTLAA 194

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +     T    A    I  E  +       + G+G  +  + +         G++++  
Sbjct: 195 PFFAALKTGGPLAILGVIGGEFIA------SSEGVGHELFTAAQNLDAAAEFAGLIVLVA 248

Query: 565 FVLALNRFL-------WHPLYLYGTRC 584
             LALN  L          L L   R 
Sbjct: 249 LTLALNGVLTALDSYALKRLGLAARRR 275



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+ D +   L   +       T + +L+   + +    V   +      LG VL P++
Sbjct: 57  PTDVYDALIDMLGSSTGWNDIEVTAIEVLAGFGLGVAAGTVMGLVLGSFPLLGRVLEPLV 116

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +  IP +      +++F      K+  A     F +F         ++Y  L    R+
Sbjct: 117 AAVNGIPKIALAPLFLLFFGIGQWSKITIAMTGVAFVVFY--------NIYLGLRLRERE 168

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L EV +           Y+ +P         +          V+  E I   +      G
Sbjct: 169 LVEVVQVMGGRRQHVLGYVTLPTLAAPFFAALKTGGPLAILGVIGGEFIASSE------G 222

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  +  A +  D  A    ++ ++ +    + +L
Sbjct: 223 VGHELFTAAQNLDAAAEFAGLIVLVALTLALNGVL 257


>gi|254516260|ref|ZP_05128320.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [gamma proteobacterium NOR5-3]
 gi|219675982|gb|EED32348.1| glycine betaine/L-proline ABC transporter, permease and
           substrate-binding protein [gamma proteobacterium NOR5-3]
          Length = 490

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 26/199 (13%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ +  L     A L ++S R+   L  +  + Q+           +  + L    +  
Sbjct: 305 IAVGLGCLVAIPLALLVSRSSRVAGALQYLASLFQT--------IPALALLALLIPILGL 356

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +  AIFA+F   +  +  +    L  +   L+EV+RS  L+  Q+   + +P + P ++
Sbjct: 357 GQTTAIFALFLYSLLPIVRNTLAGLAGVDPLLKEVARSLGLTPTQQILRIELPLATPMII 416

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQDLLAILYAMLT-- 247
             +             + +I +G   +       G+G  I   +   +   IL   +   
Sbjct: 417 AGIKT-----------AAIISIGTATLAAFVGAGGLGEPIITGLSLNNHRLILEGAIPAA 465

Query: 248 -MLGVIFLYDQLLFRPMIV 265
            +     L   LL R  I 
Sbjct: 466 CLAIATELAFGLLERRFIP 484



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 5/197 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            + +   + +    + + +  ++ IP+ + +     ++  +Q  A L    PA     L+
Sbjct: 291 RIAYNTAVHLKLTAIAVGLGCLVAIPLALLVSRSSRVAGALQYLASLFQTIPALALLALL 350

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +              +   +   I+ N +AG +      KEVA S  +T  +    I
Sbjct: 351 IPILGLGQTT----AIFALFLYSLLPIVRNTLAGLAGVDPLLKEVARSLGLTPTQQILRI 406

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVV 556
            LP   P  + G  TA   +   + ++     G +     TGL         +G+ P   
Sbjct: 407 ELPLATPMIIAGIKTAAIISIGTATLAAFVGAGGLGEPIITGLSLNNHRLILEGAIPAAC 466

Query: 557 LGVLIMCCFVLALNRFL 573
           L +     F L   RF+
Sbjct: 467 LAIATELAFGLLERRFI 483


>gi|88797861|ref|ZP_01113449.1| ABC transporter, inner membrane subunit [Reinekea sp. MED297]
 gi|88779538|gb|EAR10725.1| ABC transporter, inner membrane subunit [Reinekea sp. MED297]
          Length = 256

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 80/242 (33%), Gaps = 16/242 (6%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--------LGCITM 387
           S +    +  I    +       + W +        +  D+    W            T+
Sbjct: 2   SERMKGILSPIIAIVLFLLFWEWLVWYNDWPNYKMASPSDLWPAFWKFRDLFAMYAWDTL 61

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +R VV + +A ++ +  G+ +GF   + + + P      A P     P+V       H  
Sbjct: 62  WRTVVGLALAVVVGVAFGVVMGFSKTMRTALYPLLVGFNAVPKATVVPVVALIFVGQH-- 119

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            +    L+    + + I  +V  G S    +++++  +   +    +  I LP   P + 
Sbjct: 120 -DFNTVLIAFMISFFPIAVSVSIGLSTLEPEYRDILRALGASKLTVFWKIALPKTLPEFF 178

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                A   A+  + + E+           GLG           +P +   ++ +    +
Sbjct: 179 GALKVASTLAFIGTNLMEIVEPHGR-----GLGHLFDSGKINADYPLMFAVLIALAVLGI 233

Query: 568 AL 569
            L
Sbjct: 234 LL 235



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 91/259 (35%), Gaps = 18/259 (6%)

Query: 15  IFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           I   I  ++ F+L    ++        +   P D+        D+ ++  YA  T  R +
Sbjct: 8   ILSPIIAIVLFLLFWEWLVWYNDWPNYKMASPSDLWPAFWKFRDLFAM--YAWDTLWRTV 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++++    +  +   S+ +   L P+L    ++P    +    + F+  +      
Sbjct: 66  VGLALAVVVGVAFGVVMGFSKTMRTALYPLLVGFNAVPKATVVPVVALIFVGQH------ 119

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +   +   F    + +  S+   L  +  +  ++ R+   S    FW + +P ++P   
Sbjct: 120 -DFNTVLIAFMISFFPIAVSVSIGLSTLEPEYRDILRALGASKLTVFWKIALPKTLPEFF 178

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +  +      E++          G+G          D   +   ++ +  +  
Sbjct: 179 GALKVASTLAFIGTNLMEIV-----EPHGRGLGHLFDSGKINADYPLMFAVLIALAVLGI 233

Query: 254 LY---DQLLFRPMIVWSNK 269
           L      +L +    W+ +
Sbjct: 234 LLYYAVVILEKIFAGWAER 252


>gi|306821678|ref|ZP_07455275.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550260|gb|EFM38254.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 247

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 85/241 (35%), Gaps = 27/241 (11%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----TYQDVLYVIWLGCI---------TMFRVVVLII 395
             ++   ++ + WQ +  ++N      T   +LY IW   +         T+    + + 
Sbjct: 6   IILLINCSLLVLWQILATVINAPYILPTPTQILYKIWELRVPLFTVHLPYTLLITSLGLG 65

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I+ I+ I + + +   P     + P        P     PL +    Y          ++
Sbjct: 66  ISVILGIFLSVIMDLFPSCKKILYPIIVSSQTIPTIAIAPLFILWFGYG----IWSKVVV 121

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +  T + I+ NV  G  +   D KE+  +F  T  + +  + +    PY+++    A  
Sbjct: 122 TVLITFFAIVINVYDGLQSAKEDMKELLITFGATKMQIFFILKVKTALPYFISSIKMAIP 181

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC----FVLALNR 571
            +   + + E            GLG +      +     V   ++I+       V  ++R
Sbjct: 182 ISIIGAAIGEWLG------SQMGLGYFSKRMMTQLDGAGVFAPIVILSVLAMFLVFLVDR 235

Query: 572 F 572
           F
Sbjct: 236 F 236



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 98/248 (39%), Gaps = 18/248 (7%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            +++  I+  +++       P  I+  +   L V     +   T L     + IS++   
Sbjct: 14  LLVLWQILATVINAPYILPTPTQILYKI-WELRVPLFTVHLPYTLLITSLGLGISVILGI 72

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             + +         +L PI+   Q+IP +      +++F      KV+   L   FAI  
Sbjct: 73  FLSVIMDLFPSCKKILYPIIVSSQTIPTIAIAPLFILWFGYGIWSKVVVTVLITFFAI-- 130

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                   ++Y  L +   D++E+  +F  +  Q F+ L V  ++P  + ++ M++    
Sbjct: 131 ------VINVYDGLQSAKEDMKELLITFGATKMQIFFILKVKTALPYFISSIKMAIPIS- 183

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR--- 261
             ++ +    +G+ +    G+G +    + + D   +   ++ +  +      L+ R   
Sbjct: 184 --IIGA---AIGEWLGSQMGLGYFSKRMMTQLDGAGVFAPIVILSVLAMFLVFLVDRFEQ 238

Query: 262 PMIVWSNK 269
             I W +K
Sbjct: 239 KFINWRDK 246


>gi|330807505|ref|YP_004351967.1| amino acid ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375613|gb|AEA66963.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 217

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   +     +    +  A+ ++++          +   L   L     ++ +IP + 
Sbjct: 9   HLDWPLVLHLTWQHITLVGIAVTLAIVVGVPLGIFMTRFPALAGPLQASATVLLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                + ++     G      + AI A+F   +  +  + Y +L  +   + E +R   +
Sbjct: 69  LFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q+   + +P ++P ++  +  ++      +  +  I  G       G+G  I  +I 
Sbjct: 126 TFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILASIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D+  ++   + +  +    D LL
Sbjct: 179 RSDMSMLIVGAVLVSLLAIFADLLL 203



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 11/207 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
            +H  +  VL++ W        V + + +A ++ +P+GI++   P ++  +Q  A +L  
Sbjct: 7   FSHLDWPLVLHLTWQHITL---VGIAVTLAIVVGVPLGIFMTRFPALAGPLQASATVLLT 63

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P+   F L++   S +        ++  +   +   I+ N     +      +E A   
Sbjct: 64  IPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGI 123

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +T  +  R + LP   P  + G  TA         ++     G       GLG  I  S
Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GLGVLILAS 176

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +++G +++    +  +  L
Sbjct: 177 ISRSDMSMLIVGAVLVSLLAIFADLLL 203


>gi|288574267|ref|ZP_06392624.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570008|gb|EFC91565.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 249

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +   G +T   +++ + +A  + +P+   +  +P++   + PF     A P     P++V
Sbjct: 48  LARHGAVTALEIILGLTLALALAVPLSTAMFAKPYLERALSPFLIASQAIPVFALAPVLV 107

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               Y   +  +  ++++ F     +  N++ G  +    ++++              + 
Sbjct: 108 VWFGYGITSKVVMATVIIFF----PVTVNLLEGFKSCDRRYRQMFRLMGYPFRDTMVKLY 163

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY+  G   A   A   +++ E           +GLG  + +S  +     V   
Sbjct: 164 WPWALPYFFAGLKVAVSVATIGAVIGEWVG------AQSGLGYLMIQSNARLKTDMVFAA 217

Query: 559 VLIMCCFVLAL 569
           +L +    LAL
Sbjct: 218 ILWLSVMGLAL 228



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 83/224 (37%), Gaps = 14/224 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           PR    ++   +    L ++ + T L ++  + ++L      +T       L   L P L
Sbjct: 32  PRPSSVVLTAVVQAPILARHGAVTALEIILGLTLALALAVPLSTAMFAKPYLERALSPFL 91

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
              Q+IP+       VV+F      KV+ A +   F         +T ++ +   +  R 
Sbjct: 92  IASQAIPVFALAPVLVVWFGYGITSKVVMATVIIFF--------PVTVNLLEGFKSCDRR 143

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
             ++ R            L  P+++P     + +++S      VA+   V+G+ V    G
Sbjct: 144 YRQMFRLMGYPFRDTMVKLYWPWALPYFFAGLKVAVS------VATIGAVIGEWVGAQSG 197

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           +G  +  +        +  A+L +  +      L+ +    ++ 
Sbjct: 198 LGYLMIQSNARLKTDMVFAAILWLSVMGLALWWLVGKLAERYAP 241


>gi|254283768|ref|ZP_04958736.1| ABC transporter amino acid permease [gamma proteobacterium NOR51-B]
 gi|219679971|gb|EED36320.1| ABC transporter amino acid permease [gamma proteobacterium NOR51-B]
          Length = 494

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  +           L A V++ +     A + A+  R+   L+ +  ++Q+        
Sbjct: 290 LARVLGTTMTHLKLTLIAFVLACVVAIPLALVLARFERISRGLIYLAGLIQT-------- 341

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    V   ++ AI A+F   +  +  +    L ++   L EV+    L+  
Sbjct: 342 IPSLALLALLIPLVGLGQIPAIIALFLYSLLPLIRNTLAGLFSVDPLLIEVADGMGLTHR 401

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q+   + VP +MP ++  M  +       VV S         +   G+G  I   +   +
Sbjct: 402 QRLRLIEVPLAMPMILAGMKTA-------VVVSIGTATLAAFVGAGGLGEPIIAGLNLNN 454

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              IL   +    +    + L 
Sbjct: 455 TTLILEGAIPAACLAMAAELLF 476



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +  V+      +   ++  ++A ++ IP+ + +     IS  +   A L+   P+     
Sbjct: 290 LARVLGTTMTHLKLTLIAFVLACVVAIPLALVLARFERISRGLIYLAGLIQTIPSLALLA 349

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  V        +   + +   +   ++ N +AG  +      EVA    +T  +  R
Sbjct: 350 LLIPLVGLGQ----IPAIIALFLYSLLPLIRNTLAGLFSVDPLLIEVADGMGLTHRQRLR 405

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I +P   P  + G  TA   +   + ++     G       GLG  I       +   +
Sbjct: 406 LIEVPLAMPMILAGMKTAVVVSIGTATLAAFVGAG-------GLGEPIIAGLNLNNTTLI 458

Query: 556 VLGVL 560
           + G +
Sbjct: 459 LEGAI 463


>gi|110635308|ref|YP_675516.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286292|gb|ABG64351.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 210

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +    ++S++ I+L+ + V     A+  +    ++ +  ++ +IP L      +     
Sbjct: 16  IQHLYLVVSSVGIALIISLVVGIWVARRPKAFSAIIMVTGVLFAIPSLALFALLIPLMGI 75

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                + G    ++  +          ++     +IP D+ E +        ++ W + +
Sbjct: 76  GTGPAITGLSAYSLMILIR--------NIAVGFQSIPADVLEAAHGMGYGTPRRLWEVEL 127

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +V  + ++        V    I      I   G+G+ I   I ++    I+   
Sbjct: 128 PLAMPFIVAGIRIA-------TVTVVGIATVAAYINAGGLGAIIFEGIDQRFPEKIIIGG 180

Query: 246 LTMLGVIFLYDQLLFR 261
           L    +  L D +L R
Sbjct: 181 LLTSALALLSDFVLSR 196



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 11/172 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++ VV  + IA II + VGIW+  RP   S I     +L A P+   F L++  +     
Sbjct: 19  LYLVVSSVGIALIISLVVGIWVARRPKAFSAIIMVTGVLFAIPSLALFALLIPLMGIGTG 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                LS   +      ++ N+  G  + P D  E A        R    + LP   P+ 
Sbjct: 79  PAITGLSAYSLMI----LIRNIAVGFQSIPADVLEAAHGMGYGTPRRLWEVELPLAMPFI 134

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           V G   A       + V+   + G       GLGA I E  ++    ++++G
Sbjct: 135 VAGIRIATVTVVGIATVAAYINAG-------GLGAIIFEGIDQRFPEKIIIG 179


>gi|317178822|dbj|BAJ56610.1| osmoprotection protein [Helicobacter pylori F30]
          Length = 554

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            VAI +    + +++  F +   +Y I L       V +   +  +  + +G+++ +   
Sbjct: 30  LVAIALKIGVVKHLIQDF-HDRFIYFIDLLAQHFIIVALSSFLVLVFGVLIGVFVFYNSK 88

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 89  ARAFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALK 144

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 145 EVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 198

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G LI+  F +  ++F+
Sbjct: 199 GAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSVLADKFV 237



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 65  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPLIGVGLKN-- 122

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 123 ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 176

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 177 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 229

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 230 SVLADKFV 237


>gi|11498584|ref|NP_069812.1| osmoprotection protein (proW-1) [Archaeoglobus fulgidus DSM 4304]
 gi|2649617|gb|AAB90262.1| osmoprotection protein (proW-1) [Archaeoglobus fulgidus DSM 4304]
          Length = 204

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 71/192 (36%), Gaps = 15/192 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L    A+ +S+      A  +  SR+L  V++   +++Q++P    +   V +  
Sbjct: 11  TYEHLLLTYGALAVSIALAIPLAIASVYSRKLASVIMAFANVVQAVPSFAVVALVVPFLG 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +          A+FAI    +  +  + Y  + ++     + +R   L+ +Q   Y+ 
Sbjct: 71  IGFTP--------AVFAIVLRALLPIVRNTYVGMMSVDEATIDAARGIGLTDFQIIRYIR 122

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +   +   +        F  + +  I +   +I   G+G  +   +   +   ++  
Sbjct: 123 LPNAYAPMFAGIK-------FAGILANSIAILTAIIGSGGLGRLVFEGLASFNTEKVIAG 175

Query: 245 MLTMLGVIFLYD 256
            L  + +    D
Sbjct: 176 ALPAILIAVFID 187



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           ++L V+      +      + ++  + IP+ I   +   ++S I  FA ++ A P+    
Sbjct: 3   ELLKVLAATYEHLLLTYGALAVSIALAIPLAIASVYSRKLASVIMAFANVVQAVPSFAVV 62

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            LVV  +              ++      I+ N   G  +      + A    +T ++  
Sbjct: 63  ALVVPFLGIGFT----PAVFAIVLRALLPIVRNTYVGMMSVDEATIDAARGIGLTDFQII 118

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           RYI LP  +     G   A   A + +I++ +   G       GLG  + E     +  +
Sbjct: 119 RYIRLPNAYAPMFAGIKFAGILANSIAILTAIIGSG-------GLGRLVFEGLASFNTEK 171

Query: 555 VVLGVLIMCCFVLALN 570
           V+ G L      + ++
Sbjct: 172 VIAGALPAILIAVFID 187


>gi|150397571|ref|YP_001328038.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150029086|gb|ABR61203.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 294

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 9/208 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +  V      +        SL  +A  T    L    I      + A     +R
Sbjct: 64  VLPAPHQVIVEIWDTTVNKAITSKRSLVYHAWITLSATLLGFGIGAALGVLLAVGIVHNR 123

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L+P +   Q+IPIL      +V    +    ++   L + +  F   V  M   +
Sbjct: 124 AMDRSLMPWVIASQTIPILAIAPMIIVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGL 183

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             S   I  DL     ++  S  Q FW L  P SMP L  ++ ++++      +  E+  
Sbjct: 184 R-SPETIQLDLM---HTYNASPAQTFWKLRWPSSMPYLFTSLKVAVAISLVGAIVGEL-- 237

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                  + G+G+ +         + I 
Sbjct: 238 ---PTGAVAGLGARLLAGSYYGQTVQIW 262



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   I + + + + + I     +   + P+       P     P++
Sbjct: 89  SLVYHAWITLSATLLGFGIGAALGVLLAVGIVHNRAMDRSLMPWVIASQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 149 IVVLNAIGISGLLPKALISTYLSFFPVVVGMVKGLRSPETIQLDLMHTYNASPAQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RWPSSMPYLFTSLKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 262


>gi|318604911|emb|CBY26409.1| osmoprotectant ABC transporter inner membrane protein YehW
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 276

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 86/252 (34%), Gaps = 23/252 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +L   +  +   G   + +  D+   + +     SL          +L + +I++ 
Sbjct: 33  WALLLLAGLVFGMTSLGGFFSALFPDLDRPIYVQDTFWSL---VVAHVFLVLISSIIAVF 89

Query: 82  FTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                     +   +    V+  I+ + Q+ P +  L   V             +E  AI
Sbjct: 90  IGVSAGVAVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMG--------FSEKPAI 141

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    +  +       + ++ RD+ EV+    +S  Q  W + +P + P +V  +  S
Sbjct: 142 IALVLYGLLPILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPVIVAGIRTS 201

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +        A+    VG        +GS I + +   +   ++   + +  +  + D + 
Sbjct: 202 VII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIF 254

Query: 260 F---RPMIVWSN 268
               R +  W  
Sbjct: 255 TRWNRRLSRWRE 266



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +   ++ G+  G+      +          +YV       +   V L++I+SII + +G+
Sbjct: 33  WALLLLAGLVFGMTSLGGFFSALFPDLDRPIYVQDTFWSLVVAHVFLVLISSIIAVFIGV 92

Query: 407 WIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             G            S ++    +   FP      + V  + +      + L L  +   
Sbjct: 93  SAGVAVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL-- 150

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   I G  +   D +EVA+   ++  +    + LP   P  V G  T+       
Sbjct: 151 --PILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPVIVAGIRTSVIINIGT 208

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPL 577
           + ++         + T  LG+ I       +   V+ G +++    +  +     W   L
Sbjct: 209 AAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIFTRWNRRL 261

Query: 578 YLYGT 582
             +  
Sbjct: 262 SRWRE 266


>gi|303325966|ref|ZP_07356409.1| glycine betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302863882|gb|EFL86813.1| glycine betaine/L-proline ABC transporter, permease protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 212

 Score = 71.5 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 5/151 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + +A +I +P G        +   +    Q L   P+     L++  +    +    
Sbjct: 28  AASLAVALLIAVPGGYLCVRYGGLKKALLAVFQTLRIVPSLAVLFLLIPVMGTGFMPATA 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L LL        IL N +AG    P    E A+   +T  + WR +  P   P  +TG 
Sbjct: 88  ALVLL----AVPPILLNTVAGLDGVPQGMLETAAGLGMTRRQVWRRVRFPLAMPMILTGV 143

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLG 540
             A      +A++ +++ + G   +  TGLG
Sbjct: 144 KIAVIEIIASATLAAKIGAGGLGEIIFTGLG 174



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 22/195 (11%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +++ ++LL       L  +   L   L+ +   ++ +P L  L   +      +      
Sbjct: 29  ASLAVALLIAVPGGYLCVRYGGLKKALLAVFQTLRIVPSLAVLFLLIPVMGTGF------ 82

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + A  A+    V  +  +    L  +P+ + E +    ++  Q +  +  P +MP ++
Sbjct: 83  --MPATAALVLLAVPPILLNTVAGLDGVPQGMLETAAGLGMTRRQVWRRVRFPLAMPMIL 140

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-------L 246
             + +++      ++AS  +      I   G+G  I   +    +  +L          L
Sbjct: 141 TGVKIAV----IEIIASATLAA---KIGAGGLGEIIFTGLGLNRIDLLLIGGFSVAVLSL 193

Query: 247 TMLGVIFLYDQLLFR 261
                  + D+ LFR
Sbjct: 194 AGGLTFAVLDKALFR 208


>gi|153949593|ref|YP_001401749.1| quaternary amine ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152961088|gb|ABS48549.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 384

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 20/251 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    L   +L++ II +L  G  +               D         R    +L+ +
Sbjct: 134 PVWRSLAIALLMLPIIALLASGQLDQLSLMKEYVNRRDVFDDA-----LWRHIQILLTTL 188

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V +++       L   S RL   +   L+I+Q+IP +      +     L       AEL
Sbjct: 189 VPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIPWLAEL 248

Query: 137 A--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AI A+    +  +  ++   L  +P  + E ++   ++  Q F+ + +P +
Sbjct: 249 GIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRVQMPIA 308

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP ++  + +         V + +I  G       G+G+ +   +    L  +L  ++ +
Sbjct: 309 MPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLLGVIPV 361

Query: 249 LGVIFLYDQLL 259
           + +  + D L 
Sbjct: 362 IAMAVIVDSLF 372



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 19/196 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++  ++ A +I IP+G+       +   I     ++   P+   F L+++ +S       
Sbjct: 184 LLTTLVPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIP 243

Query: 450 LWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                           + ++      ++ NV+AG  A P+   E A    +T  + +  +
Sbjct: 244 WLAELGIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRV 303

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  ++G           ++V+ +   G       GLGA + +     +   V+L
Sbjct: 304 QMPIAMPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 356

Query: 558 GVLIMCCFVLALNRFL 573
           GV+ +    + ++   
Sbjct: 357 GVIPVIAMAVIVDSLF 372


>gi|42561021|ref|NP_975472.1| phosphate ABC transport system, permease component [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
 gi|42492518|emb|CAE77114.1| phosphate ABC transport system, permease component [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
          Length = 696

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 83/596 (13%), Positives = 196/596 (32%), Gaps = 75/596 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF LLA V+++G + I  + +       + V     + D     +      T + +  +M
Sbjct: 35  IFVLLALVILLGFVMIKTNVLFNKQSFFEFVFGKNWSPDSKEFGILTITLMTLILIFISM 94

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    V + I+ ++  IP + F  F    +     L     
Sbjct: 95  LIAVPLTIFTSFFISEYLTLKSQKVTITIIKLLAGIPSVVFGLFAREQIGALFKLMGASS 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 155 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPFIYRDASLALGISKEKTTFNIIRKSATPK 214

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ M+      +A  MI        DT   + G            IG  +     
Sbjct: 215 IISAVILGMARVIGEAMAIMMIAGNSTAWFDTNNGVSGFLFSSIRTLSSTIGLEMLENSS 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+                          L++  K + 
Sbjct: 275 NLHESALYAIGMFLFILVFIINLLI--------------------------LFVSNKNSI 308

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--V 352
            + I    +           KL +   + +        +L      + ML + W  +  V
Sbjct: 309 SQKIHLVLFKNKKTHKIKHIKLYQKQTLYQIITNRAENKLFKKIYSTIMLVLMWLSISFV 368

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVI---WLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 I + +I   ++   Y +    I         +   ++LI+   +  IP+ +   
Sbjct: 369 IMFTFWIVFTTIFNGLSSLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFAIPLALACA 428

Query: 410 F--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGT 460
                      + +   +    L A+ P+ +F    +S    Y  L  +++ + + +   
Sbjct: 429 IYLSEFANKNSYFAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASITMTIV 488

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG---- 515
              +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A      
Sbjct: 489 VLPMLIKNFEDALTSVPLSYREAAVALGLSKTKTLFKIVLPNALQAIITGTILAMARIIG 548

Query: 516 -GAWNASIVSEVASWGHIHLRTTGLG-----AYIAESTEKGSFPEVVLGVLIMCCF 565
             A     +     +      ++G         IA  +  G   ++   + ++   
Sbjct: 549 ESAPIYLTLGTAIKYPDRGFLSSGSTLTTGIYKIASESAPGQGNDIAWLMSLITII 604


>gi|312862668|ref|ZP_07722908.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           vestibularis F0396]
 gi|322516804|ref|ZP_08069706.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus vestibularis ATCC 49124]
 gi|311101528|gb|EFQ59731.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           vestibularis F0396]
 gi|322124641|gb|EFX96105.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus vestibularis ATCC 49124]
          Length = 304

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 10/211 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--VHSLPQYASRTTLRMLSAMVIS 79
           L+ F++ + ++ +   G+    V +  +     + D         A    L      ++S
Sbjct: 33  LIVFIVAMILLFVAQKGLATFFVNKVSLVEFLFSGDWSPSEGKFGALPMILGSFVVTLLS 92

Query: 80  LLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGFLTF---TVVYFMNLYPGKV 131
            L    +A  AA      S +    L P ++++  IP + +       VV F+ L  G  
Sbjct: 93  ALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGT 152

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L+  F +F   +  +TF    +L  +PR   E S +   + WQ  W + +  + PG
Sbjct: 153 GFGILSGTFVLFVMILPTVTFMTTDTLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPG 212

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +   ++  M+  +   +A +M+V    VIP 
Sbjct: 213 IFTAVIFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 14/177 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPA 430
             +     + +   +    ++  ++A+   I   I++    P  +  +QP  +LL   P+
Sbjct: 71  PSEGKFGALPMILGSFVVTLLSALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPS 130

Query: 431 NVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            V+         P V        + +    ++  +MI  T   + F       A P  ++
Sbjct: 131 VVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPT---VTFMTTDTLRAVPRHYR 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W+    + L    P   T  I     A+  ++  ++       + T+
Sbjct: 188 EASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|296876746|ref|ZP_06900794.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296432248|gb|EFH18047.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 303

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 10/177 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQS 109
           + +  +    A    L      ++S L    +A  AA      S +    L P ++++  
Sbjct: 66  SWNPAAKEFGALPMILGSFIVTLLSALLATPFAIGAAVFMTEVSPKGARFLQPAIELLVG 125

Query: 110 IPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           IP + +    L   V +  +L+ G   G  L+ +F +F   +  +TF    SL  +PR  
Sbjct: 126 IPSVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRAVPRHY 184

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            E S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 185 REASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 241



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  ++A+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 74  FGALPMILGSFIVTLLSALLATPFAIGAAVFMTEVSPKGARFLQPAIELLVGIPSVVYGF 133

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P   S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 134 IGLQVVVPFTRSLFGGTGFGILSGVFVLFVMILPT---VTFMTTDSLRAVPRHYREASMA 190

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+   ++ L        T  +     A+  ++  ++       + T+
Sbjct: 191 MGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 242


>gi|291521845|emb|CBK80138.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Coprococcus catus GD/7]
          Length = 247

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 10/222 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  +  G+       +   ++           +     TM    + + I+ ++ + + I 
Sbjct: 18  WQALALGINAAYILPTPIQVIQKLWELREPLFMVHLPATMSVTFIGLGISIVLGLALAIA 77

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     +   + P        P     PL V    Y          L+ +  T + I   
Sbjct: 78  MDMHEGVRRTLYPLVIASQTIPTTAIAPLFVLWFGYS----IWSKVLVTVLMTFFPITIT 133

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V  G  +   + +E+  SF+ +    +  + LP   PY+ +    A   +   + + E  
Sbjct: 134 VYDGFQSTKREMEELMLSFNASKMDIFMKLKLPNALPYFFSAIKMAIPISIIGAAIGEWL 193

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                    +GLG +      +     V   ++++    + +
Sbjct: 194 G------AQSGLGYFSKRMLTQLDGAGVFAPIVLLSAVAMLI 229



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 86/241 (35%), Gaps = 18/241 (7%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
              + + ++       P  ++  +    +   +  +   T       + IS++     A 
Sbjct: 18  WQALALGINAAYILPTPIQVIQKLWELREPLFMV-HLPATMSVTFIGLGISIVLGLALAI 76

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
                  +   L P++   Q+IP        V++F          +  + +        +
Sbjct: 77  AMDMHEGVRRTLYPLVIASQTIPTTAIAPLFVLWFGY--------SIWSKVLVTVLMTFF 128

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T ++Y    +  R++EE+  SF  S    F  L +P ++P     + M++      ++
Sbjct: 129 PITITVYDGFQSTKREMEELMLSFNASKMDIFMKLKLPNALPYFFSAIKMAIPIS---II 185

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLFRPMIV 265
            +    +G+ +    G+G +    + + D   +   ++ +  V   I     ++ R  I 
Sbjct: 186 GA---AIGEWLGAQSGLGYFSKRMLTQLDGAGVFAPIVLLSAVAMLIVAIVGIIERIAIP 242

Query: 266 W 266
           W
Sbjct: 243 W 243


>gi|126737490|ref|ZP_01753220.1| ABC transporter, permease protein [Roseobacter sp. SK209-2-6]
 gi|126720883|gb|EBA17587.1| ABC transporter, permease protein [Roseobacter sp. SK209-2-6]
          Length = 281

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 88/266 (33%), Gaps = 10/266 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             + L+        +            +QL         + + W  +V G+ + +     
Sbjct: 5   LLAVLAWCAGWWINSRLANSPAAKTRAVQLLVPVIFGVTILVVWELLVRGLEVSLVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       +  +      T  +  +   I+     + + + +     +   + P   
Sbjct: 65  PTLIAERFASSLPILWQDFAQTFLKGALSGYIMGCGAALLMAVAVDRSDFLRRGLLPVGN 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F     +L N +AG        +++ 
Sbjct: 125 FVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAGLRETSAMQRDLM 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I
Sbjct: 181 QTYAASYWQSFFKLRLPAALPFIFNGLKISTTLALVGAIVAEFFGS-----PTVGMGFRI 235

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
           + S  + +   V   +L+        
Sbjct: 236 STSVGQLALDMVWAEILVAALAGSLF 261



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 102/263 (38%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF +   V+   ++  L   +     P  I +    +L +  L Q  ++T L+ 
Sbjct: 33  QLLVPVIFGVTILVVWELLVRGLEVSLVILPAPTLIAERFASSLPI--LWQDFAQTFLKG 90

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS  ++      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K 
Sbjct: 91  ALSGYIMGCGAALLMAVAVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKA 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F         M  +    L        ++ +++  S WQ F+ L +P ++P 
Sbjct: 151 AVVVVMVFF--------PMLVNTVAGLRETSAMQRDLMQTYAASYWQSFFKLRLPAALPF 202

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +S +      + +E         P  G+G  I+ ++ +  L  +   +L     
Sbjct: 203 IFNGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEILVAALA 257

Query: 252 IFLY---DQLLFRPMIVWSNKFR 271
             L+     L+ + +  W    R
Sbjct: 258 GSLFYGVIALVEKSLTFWHPSQR 280


>gi|110834749|ref|YP_693608.1| sulfonate ABC transporter permease [Alcanivorax borkumensis SK2]
 gi|110647860|emb|CAL17336.1| sulfonate ABC transporter permease protein [Alcanivorax borkumensis
           SK2]
          Length = 276

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I++++ I VGI  G  P I S   P    L+  P     P++      
Sbjct: 81  LASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVTGLSLVPPMAMLPVLFIIFGL 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L       +L+I G   +++ ++   A   P +      +     W+    ++ P + 
Sbjct: 141 GEL----AKVMLIIIGITPFMIRDLQQRAMEIPAEQIIKLQTLGANTWQIITRLVWPQLM 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++    + G AW   I +           T GLG  I       S   ++  V+ + 
Sbjct: 197 PRLISAVRLSLGPAWLFLIAA------EAIAATEGLGYRIFLVRRYLSMDVILPYVVWIT 250

Query: 564 CFVLALNRFL 573
               A++  L
Sbjct: 251 LLAFAIDLIL 260



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 14/202 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      +  R+   + IS L   +          +     P++  +  +P +  L    
Sbjct: 76  LLADTLASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVTGLSLVPPMAMLPVLF 135

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           ELA +  I       M   + Q    IP +     ++   + WQ  
Sbjct: 136 IIFGLG--------ELAKVMLIIIGITPFMIRDLQQRAMEIPAEQIIKLQTLGANTWQII 187

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L  P  MP L+  + +S+   W F++        + +    G+G  I L  +   +  
Sbjct: 188 TRLVWPQLMPRLISAVRLSLGPAWLFLI------AAEAIAATEGLGYRIFLVRRYLSMDV 241

Query: 241 ILYAMLTMLGVIFLYDQLLFRP 262
           IL  ++ +  + F  D +L R 
Sbjct: 242 ILPYVVWITLLAFAIDLILSRY 263


>gi|227328908|ref|ZP_03832932.1| ABC transporter, permease protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 271

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 83/210 (39%), Gaps = 17/210 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+   + I+ L + ++   A         L P++ ++  IP L  L    + F 
Sbjct: 75  TQASLVRLALGLGIASLLSLLFGVAAGAFPLFRASLSPLMTVLSMIPPLAILPILFIVFG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   + Q   NIP++    +++   + W     + 
Sbjct: 135 LD--------ELSKVMLIVIGVTPMLARDLEQRARNIPQETLIKAQTLGANSWVVVLRVI 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L+ ++ + +   W F++++E I          G+G  I L  +   +  IL  
Sbjct: 187 LPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPY 240

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           ++ +  + +L D   + L R    WS + +
Sbjct: 241 VVWITLLAWLMDMTLRWLHRRWFPWSEESK 270



 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 14/210 (6%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ WL    ++ R+ + + IAS++ +  G+  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWLDTQASLVRLALGLGIASLLSLLFGVAAGAFPLFRASLSPLMTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VMLIVIGVTPMLARDLEQRARNIPQETLIKAQTLGANSWVVVLR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP +    +       G AW   I +E  S       T GLG  I       +   ++
Sbjct: 185 VILPQLLSRLLISLRLLLGAAWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVIL 238

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             V+ +      ++   R+L    + +   
Sbjct: 239 PYVVWITLLAWLMDMTLRWLHRRWFPWSEE 268


>gi|319901743|ref|YP_004161471.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Bacteroides helcogenes P 36-108]
 gi|319416774|gb|ADV43885.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Bacteroides helcogenes P 36-108]
          Length = 394

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++++L F    A   ++  +  +  ++ P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILMALPFGLAVAIYMSEVANSGIRNLMKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +   V  + LA    +    +  +      +L N PR + E S +   S WQ  +
Sbjct: 238 FIQKTFDLPVGESGLAGSIVLAIMALPTIITVTEDALRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  LL
Sbjct: 358 APAGGSHYEALFLLGVVLFFISLL 381



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I++A    + V I++       I + ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSLFAILMALPFGLAVAIYMSEVANSGIRNLMKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         P +            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPFIQKTFDLPVGESGLAGSIVLAIMALPTIITVTEDALRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     +  T
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHT 339


>gi|193212579|ref|YP_001998532.1| phosphate ABC transporter inner membrane subunit PstA
           [Chlorobaculum parvum NCIB 8327]
 gi|193086056|gb|ACF11332.1| phosphate ABC transporter, inner membrane subunit PstA
           [Chlorobaculum parvum NCIB 8327]
          Length = 448

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 8/155 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++F F    +AA       K   L  +L      +  +P + F  F + +F+N      
Sbjct: 233 AMVFAFPLGVIAAVYFTEYAKDGFLTSMLRSANSTLAGVPSIVFGLFGLAFFINTLHVSH 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++  +P+  +E S     + W     + +P ++PG
Sbjct: 293 SKSVLAGSLTLAIMILPTIIRAAEEAILAVPKTYKEASLGLGSTKWNTIVTVILPAALPG 352

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           ++   ++S+        A  +     +V    G+G
Sbjct: 353 ILTGGVISLGRA-AGETAPIIFTAAVSVGAAIGLG 386



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 20/165 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           + L I A +   P+G+              ++S ++     LA  P+ V F L       
Sbjct: 227 IFLAIGAMVFAFPLGVIAAVYFTEYAKDGFLTSMLRSANSTLAGVPSIV-FGLFGLAFFI 285

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYII 498
             L+ +   S+L    T   ++   I         A P  +KE +     T W     +I
Sbjct: 286 NTLHVSHSKSVLAGSLTLAIMILPTIIRAAEEAILAVPKTYKEASLGLGSTKWNTIVTVI 345

Query: 499 LPGIFPYYVTGAITACGGAWNA---SIVSEVASWGHIHLRTTGLG 540
           LP   P  +TG + + G A       I +   S G       GLG
Sbjct: 346 LPAALPGILTGGVISLGRAAGETAPIIFTAAVSVG----AAIGLG 386


>gi|22126869|ref|NP_670292.1| ABC transport system inner membrane permease [Yersinia pestis KIM
           10]
 gi|51595581|ref|YP_069772.1| ABC type choline/glycine/betaine transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806906|ref|YP_650822.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Antiqua]
 gi|108812939|ref|YP_648706.1| ABC transport integral membrane subunit [Yersinia pestis Nepal516]
 gi|145599768|ref|YP_001163844.1| ABC transport integral membrane subunit [Yersinia pestis Pestoides
           F]
 gi|149366810|ref|ZP_01888844.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CA88-4125]
 gi|162419715|ref|YP_001605861.1| quaternary amine ABC transporter permease [Yersinia pestis Angola]
 gi|165924809|ref|ZP_02220641.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938338|ref|ZP_02226896.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009921|ref|ZP_02230819.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211582|ref|ZP_02237617.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400254|ref|ZP_02305767.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419827|ref|ZP_02311580.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424092|ref|ZP_02315845.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466726|ref|ZP_02331430.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis FV-1]
 gi|170025088|ref|YP_001721593.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186894645|ref|YP_001871757.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|218928358|ref|YP_002346233.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CO92]
 gi|229841141|ref|ZP_04461300.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843245|ref|ZP_04463391.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894137|ref|ZP_04509323.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Pestoides A]
 gi|229903371|ref|ZP_04518484.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Nepal516]
 gi|270487180|ref|ZP_06204254.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503214|ref|YP_003567276.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Z176003]
 gi|21959903|gb|AAM86543.1|AE013901_4 putative ABC transport system inner membrane permease [Yersinia
           pestis KIM 10]
 gi|51588863|emb|CAH20477.1| ABC type choline/glycine/betaine transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108776587|gb|ABG19106.1| ABC transport integral membrane subunit [Yersinia pestis Nepal516]
 gi|108778819|gb|ABG12877.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Antiqua]
 gi|115346969|emb|CAL19860.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CO92]
 gi|145211464|gb|ABP40871.1| ABC transport integral membrane subunit [Yersinia pestis Pestoides
           F]
 gi|149291184|gb|EDM41259.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CA88-4125]
 gi|162352530|gb|ABX86478.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis Angola]
 gi|165913716|gb|EDR32335.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923869|gb|EDR41001.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991317|gb|EDR43618.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207353|gb|EDR51833.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962568|gb|EDR58589.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050203|gb|EDR61611.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056941|gb|EDR66704.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169751622|gb|ACA69140.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|186697671|gb|ACC88300.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229679141|gb|EEO75244.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Nepal516]
 gi|229689592|gb|EEO81653.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697507|gb|EEO87554.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704022|gb|EEO91035.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Pestoides A]
 gi|262361253|gb|ACY57974.1| putative ABC transport integral membrane subunit [Yersinia pestis
           D106004]
 gi|262365210|gb|ACY61767.1| putative ABC transport integral membrane subunit [Yersinia pestis
           D182038]
 gi|270335684|gb|EFA46461.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353673|gb|ADE64014.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Z176003]
 gi|320015963|gb|ADV99534.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 384

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 20/251 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    L   +L++ II +L  G  +               D         R    +L+ +
Sbjct: 134 PVWRSLAIALLMLPIIALLASGQLDQLSLMKEYVNRRDVFDDA-----LWRHIQILLTTL 188

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V +++       L   S RL   +   L+I+Q+IP +      +     L       AEL
Sbjct: 189 VPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIPWLAEL 248

Query: 137 A--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AI A+    +  +  ++   L  +P  + E ++   ++  Q F+ + +P +
Sbjct: 249 GIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRVQMPIA 308

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP ++  + +         V + +I  G       G+G+ +   +    L  +L  ++ +
Sbjct: 309 MPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLLGVIPV 361

Query: 249 LGVIFLYDQLL 259
           + +  + D L 
Sbjct: 362 IAMAVIVDSLF 372



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 19/196 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++  ++ A +I IP+G+       +   I     ++   P+   F L+++ +S       
Sbjct: 184 LLTTLVPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIP 243

Query: 450 LWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                           + ++      ++ NV+AG  A P+   E A    +T  + +  +
Sbjct: 244 WLAELGIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRV 303

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  ++G           ++V+ +   G       GLGA + +     +   V+L
Sbjct: 304 QMPIAMPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 356

Query: 558 GVLIMCCFVLALNRFL 573
           GV+ +    + ++   
Sbjct: 357 GVIPVIAMAVIVDSLF 372


>gi|259416715|ref|ZP_05740635.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259348154|gb|EEW59931.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 281

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 84/266 (31%), Gaps = 10/266 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
           F + L                      + L         + I W  +V G+ + +     
Sbjct: 5   FLALLVWVAGWWINARLANGPKANSRAVGLLVPAIFGVTILIVWELLVRGLEVPLVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       +  +      T+ +  +   +I         I +     +   + P   
Sbjct: 65  PSLIAERFASSLPILWADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGN 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F     +L N +AG        +++ 
Sbjct: 125 FVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAGLRETDQMQRDLM 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+    + LP   P+   G   +   A   +IV+E          T G+G  I
Sbjct: 181 RTYAASYWQSLFKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGS-----PTVGMGFRI 235

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
           + S  + +   V   +++        
Sbjct: 236 STSVGQLALDMVWAEIVVAALAGSLF 261



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 101/261 (38%), Gaps = 19/261 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   ++   ++  L   +     P  I +    +L +  L    S+T L+  L
Sbjct: 35  LVPAIFGVTILIVWELLVRGLEVPLVILPAPSLIAERFASSLPI--LWADFSQTILKGAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              VI     F+ A L  +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 93  GGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         M  +    L    +   ++ R++  S WQ  + L +P ++P + 
Sbjct: 153 VVVMVFF--------PMLVNTVAGLRETDQMQRDLMRTYAASYWQSLFKLRLPAALPFVF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +      + +E         P  G+G  I+ ++ +  L  +   ++       
Sbjct: 205 NGLKISTTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALAGS 259

Query: 254 LYD---QLLFRPMIVWSNKFR 271
           L+     LL + +  W    R
Sbjct: 260 LFYGSMALLEKTLTFWHPSQR 280


>gi|56412922|ref|YP_149997.1| permease [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197361853|ref|YP_002141489.1| permease [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56127179|gb|AAV76685.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093329|emb|CAR58777.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 389

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       A           A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 241 GLVKQFSWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 SWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|71737417|ref|YP_276397.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|213966735|ref|ZP_03394886.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383244|ref|ZP_07231662.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061444|ref|ZP_07252985.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133491|ref|ZP_07259481.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|71557970|gb|AAZ37181.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|115265546|dbj|BAF32808.1| Permease of glycine betaine/carnitine/choline ABC transporter
           [Pseudomonas syringae pv. actinidiae]
 gi|213928585|gb|EEB62129.1| glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|320322606|gb|EFW78699.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|330873459|gb|EGH07608.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330962458|gb|EGH62718.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
 gi|330965280|gb|EGH65540.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331019725|gb|EGH99781.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 237

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + I  I      L  Y     + +L +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGISTIKQYQDDLLFYLQAHLILVLVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +++       A    ++G        +GS I   I   +
Sbjct: 170 ALAI--NVGTAPLAFLIGANS-----LGSLIFPGIALNN 201



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   V I +    I +I      Q    +++     +  V+V ++ A ++ IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALS 68

Query: 410 ---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|238853903|ref|ZP_04644266.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri 202-4]
 gi|282851004|ref|ZP_06260378.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri 224-1]
 gi|311111014|ref|ZP_07712411.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri MV-22]
 gi|238833489|gb|EEQ25763.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri 202-4]
 gi|282557956|gb|EFB63544.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri 224-1]
 gi|311066168|gb|EFQ46508.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           gasseri MV-22]
          Length = 330

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A   A       S++    L  +++++  IP + +    LT  V +
Sbjct: 115 FSVTLLAALVATPFAIAVALFMTEYSSKKGARFLQSVIELLVGIPSVVYGFLGLTIIVPF 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 175 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 233

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 234 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 267



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I +            + 
Sbjct: 87  VFQFLTSSDWDPGEGKSHVGAAAMIITSFSVTLLAALVATPFAIAVALFMTEYSSKKGAR 146

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 147 FLQSVIELLVGIPSVVYGFLGLTIIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 207 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 266

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 267 NAVLMPAN 274


>gi|194467048|ref|ZP_03073035.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri 100-23]
 gi|194454084|gb|EDX42981.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri 100-23]
          Length = 299

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 21/212 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  + A+ ++L+     A            L P ++++  IP + +    LT  V + 
Sbjct: 87  TLLSGIIALPLALVVAI--AITEILPSTAYKFLQPTIELLVGIPSVVYGYVGLTVIVPFL 144

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              + G   G  LAA   +F   +  MT     S   +P+     S     + WQ    +
Sbjct: 145 RRFFGGTGFGI-LAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATRWQTISRV 203

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--------------GIGSYI 229
            +P +  G++  M+  M+  +   +A +M++   TV+P                GIG+ +
Sbjct: 204 IIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLTTGIGNTV 263

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              I    L ++   +L M     L  +L+ R
Sbjct: 264 MGTISNNALWSLALILLVMSLAFNLLMRLVSR 295



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 93/277 (33%), Gaps = 36/277 (12%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWL--------G 383
           Q  S + +SY+       +V  + I + W+ I  +  NH++  + L  I           
Sbjct: 17  QEASGKVISYLAITLIGGLVATILIFLTWKGIALFTGNHYSLWEFLSGIKWRPSDHVFGA 76

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIG------FRPHISSKIQPFAQLLAAFPANVF--FP 435
              +     + +++ II +P+ + +               +QP  +LL   P+ V+    
Sbjct: 77  LPMIATSFSVTLLSGIIALPLALVVAIAITEILPSTAYKFLQPTIELLVGIPSVVYGYVG 136

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFKEVASSFHITG 490
           L V               +L      + ++        I    A P  ++  ++    T 
Sbjct: 137 LTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATR 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR--------------T 536
           W+    +I+P      +T  +     A+  ++  ++       +               T
Sbjct: 197 WQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLT 256

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           TG+G  +  +    +   + L +L+M      L R +
Sbjct: 257 TGIGNTVMGTISNNALWSLALILLVMSLAFNLLMRLV 293


>gi|319782805|ref|YP_004142281.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168693|gb|ADV12231.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 292

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 9/192 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL   A  T    L           + A        L   L+P +   Q+IPIL  
Sbjct: 82  TSNRSLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHVATLDRSLMPWIIASQTIPILAV 141

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + + +  F    + +T  M + L +      ++  ++  S
Sbjct: 142 APMIIVVLGAIGISGLVPKAMISTYLSF----FPVTVGMVKGLRSPEIMHLDLMHTYNAS 197

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L VP S+P L  +M ++++      +  E+         + GIG+ +      
Sbjct: 198 RAQTFWKLRVPASVPFLFTSMKVAVAASLVGAIVGEL-----PTGAVAGIGAKLLAGAYY 252

Query: 236 QDLLAILYAMLT 247
              + I  A++ 
Sbjct: 253 SQSIDIWSALVA 264



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/184 (9%), Positives = 69/184 (37%), Gaps = 5/184 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++     + + I + + I     +   + P+       P     P++
Sbjct: 86  SLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHVATLDRSLMPWIIASQTIPILAVAPMI 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    ++  +  +++  + + + +   ++ G  +      ++  +++ +  + +  +
Sbjct: 146 IVVLGAIGISGLVPKAMISTYLSFFPVTVGMVKGLRSPEIMHLDLMHTYNASRAQTFWKL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P+  T    A   +   +IV E+ +         G+GA +          ++  
Sbjct: 206 RVPASVPFLFTSMKVAVAASLVGAIVGELPTGA-----VAGIGAKLLAGAYYSQSIDIWS 260

Query: 558 GVLI 561
            ++ 
Sbjct: 261 ALVA 264


>gi|308186887|ref|YP_003931018.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308057397|gb|ADO09569.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 238

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVL----YVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            G+A+      I  ++    +  ++     +++LG   +F V   ++ A ++ IP GI +
Sbjct: 10  AGLALLAVVAVIAVLIWGLGWDQLVARKVDLLYLGQQHLFLVFWSMLFALLVGIPSGILL 69

Query: 409 GF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                   +  +     +    P      L +  +            + +   +   I+ 
Sbjct: 70  SRPFARRWAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDR----PALIALFLASLLPIVR 125

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  +G SA P    E A+   +T W+  R + LP   P  ++G   A       + ++ +
Sbjct: 126 NTFSGLSAVPPSLIEAANGIGMTKWQRLRQVELPNAMPVILSGVRIATAINVGTAPLAFL 185

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                     +  G  I        FP ++LG +      L L+  L
Sbjct: 186 IG-------ASSFGELIFPGIYLNDFPTLILGAVATALVALVLDMML 225



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    +  +M+ +LL       L ++   RR    ++ I ++  ++P L  L  
Sbjct: 40  LLYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V                A+ A+F + +  +  + +  L  +P  L E +    ++ WQ
Sbjct: 100 AMVIIGIGDRP--------ALIALFLASLLPIVRNTFSGLSAVPPSLIEAANGIGMTKWQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P +MP ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 152 RLRQVELPNAMPVILSGVRIA--TAINVGTAPLAFLIGASSF-----GELIFPGIYLNDF 204

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++   +    V  + D +L
Sbjct: 205 PTLILGAVATALVALVLDMML 225


>gi|229815539|ref|ZP_04445866.1| hypothetical protein COLINT_02586 [Collinsella intestinalis DSM
           13280]
 gi|229808769|gb|EEP44544.1| hypothetical protein COLINT_02586 [Collinsella intestinalis DSM
           13280]
          Length = 217

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 75/196 (38%), Gaps = 15/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +  +   + + + M+IS     +      +SR LG  +V +L    +IP L       
Sbjct: 14  LLEATAEHLMLLGATMLISCAIAALITVACLRSRPLGNAVVEVLGAAYAIPSLAL----- 68

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F  L P   +G   A I  +  +Q   +  +  + +  +   L E +R   LS  Q  
Sbjct: 69  --FALLIPLTGLGFTSAVIVMVVYNQFM-LVRNALEGIRGVDPALIEAARGMGLSDSQVL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + ++        +++  I      I   G+G  +   ++  ++  
Sbjct: 126 IKVQLPLALPAIIAGVRLA-------CISTVGIATIAATINAGGLGMILLSGLRSMNIDK 178

Query: 241 ILYAMLTMLGVIFLYD 256
           IL   +    +    D
Sbjct: 179 ILAGTICCAALALALD 194



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++I+  I   + +       + + +        A P+   F L++        
Sbjct: 22  LMLLGATMLISCAIAALITVACLRSRPLGNAVVEVLGAAYAIPSLALFALLIPLTGLGFT 81

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      ++M+   Q+ ++ N + G         E A    ++  +    + LP   P  
Sbjct: 82  S----AVIVMVVYNQFMLVRNALEGIRGVDPALIEAARGMGLSDSQVLIKVQLPLALPAI 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   AC      + ++   + G       GLG  +       +  +++ G +      
Sbjct: 138 IAGVRLACISTVGIATIAATINAG-------GLGMILLSGLRSMNIDKILAGTICCAALA 190

Query: 567 LALN 570
           LAL+
Sbjct: 191 LALD 194


>gi|148988844|ref|ZP_01820259.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP6-BS73]
 gi|149012828|ref|ZP_01833773.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP19-BS75]
 gi|147763259|gb|EDK70198.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP19-BS75]
 gi|147925655|gb|EDK76731.1| ABC transporter, permease protein [Streptococcus pneumoniae
           SP6-BS73]
          Length = 232

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 14/188 (7%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +  + P   D   L  ++  T    L  +++ +L   + A L      L  ++ P++
Sbjct: 19  PTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMM 78

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            ++Q+IP +      V++             L  I  I  +  + +  S+     +  +D
Sbjct: 79  VVIQTIPTIAIAPILVLWLGYGI--------LPKIVLIILTTTFPIIVSILDGFRHCDKD 130

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +  +    R   WQ  W+  +P S+P     + +S+S  +   V SE +          G
Sbjct: 131 MLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGG------FEG 184

Query: 225 IGSYIALA 232
           +G Y+  +
Sbjct: 185 LGVYMIQS 192



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 60  MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 115

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 116 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 175

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 176 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 203


>gi|148543422|ref|YP_001270792.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|227363571|ref|ZP_03847688.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|325681765|ref|ZP_08161284.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
 gi|148530456|gb|ABQ82455.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|227071367|gb|EEI09673.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|324978856|gb|EGC15804.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
          Length = 221

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I+ II +P+G        ++     FAQLL   P+     L++  +    +   +
Sbjct: 33  VVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALI 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G +     +KEV  +  +   +  R I +P   PY + G 
Sbjct: 93  ALIVL----ALPPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLALPYILNGI 148

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A      +A++ + + + G   L  TGLG Y       G+    +L +L M  F   +
Sbjct: 149 KLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLI 208



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +     QY  +  +  +  +VIS++       + ++ + +    V    +++ IP L  
Sbjct: 16  TNSGQYWQYVGQHIILTVVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLAL 75

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +             + A+ A+    +  +  +       +    +EV  +  + 
Sbjct: 76  LFLLIPFIGTGV--------VPALIALIVLALPPLLINTILGFNEVSPLYKEVGIALGMD 127

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 128 QRQLRRQIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 180

Query: 236 QDLLAILYAMLTMLGVIFL 254
            D+  ++   +++  +  L
Sbjct: 181 YDMSYVVIGAVSVAILSLL 199


>gi|322372964|ref|ZP_08047500.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C150]
 gi|321278006|gb|EFX55075.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp.
           C150]
          Length = 304

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 16/212 (7%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRTTLRMLSAMVIS 79
           ++V  +  ILL   Q+      +  +  I                A    L      ++S
Sbjct: 33  LIVFIVAMILLFVAQKGLATFFVNKVSLIEFLFSGNWSPSEGKFGALPMILGSFVVTLLS 92

Query: 80  LLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGK 130
            L    +A  AA      S +    L P ++++  IP + +    L   V +   ++ G 
Sbjct: 93  ALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGT 152

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
             G  L+  F +F   +  +TF    +L  +PR   E S +   + WQ  W + +  + P
Sbjct: 153 GFGI-LSGTFVLFVMILPTVTFMTTDTLRAVPRHYREASLAMGATRWQTIWRVTLNAAKP 211

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 212 GIFTAVIFGMARAFGEALAIQMVVGNSAVVPT 243



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 14/177 (7%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPA 430
             +     + +   +    ++  ++A+   I   I++    P  +  +QP  +LL   P+
Sbjct: 71  PSEGKFGALPMILGSFVVTLLSALVATPFAIGAAIFMTEISPKGAKFLQPAIELLVGIPS 130

Query: 431 NVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            V+         P V        + +    ++  +MI  T   + F       A P  ++
Sbjct: 131 VVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPT---VTFMTTDTLRAVPRHYR 187

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W+    + L    P   T  I     A+  ++  ++       + T+
Sbjct: 188 EASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAVVPTS 244


>gi|15890580|ref|NP_356252.1| ABC transporter, membrane spanning protein (anion) [Agrobacterium
           tumefaciens str. C58]
 gi|15158831|gb|AAK89037.1| ABC transporter, membrane spanning protein (anion) [Agrobacterium
           tumefaciens str. C58]
          Length = 269

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 82/207 (39%), Gaps = 14/207 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            S++ +R L+   I+     V   LA  S     ++ P++ ++  +P +G++   +++F 
Sbjct: 67  LSQSAVRALTGFAIAAGIGTVAGVLAGYSFAAMRLMKPVVTVLLGVPPIGWIVLALIWFG 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +     ++   +A+    F   +        + +    R LE ++++F    + +   + 
Sbjct: 127 SSGGTAIMTVVIASAPVSFAGAL--------EGVAKRDRQLEVMAQAFGAPWFYRLRTVT 178

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L      +    W   V +E++          GIG  +A A    D+  +   
Sbjct: 179 MPHVLSYLFPAWTTTAGSAWKVTVMAELLSNSG------GIGGELATARALFDIAQVSAW 232

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +   +G+  L D  L   +     ++R
Sbjct: 233 LTITVGLALLTDYGLLHLLREALERWR 259



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 23/263 (8%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-------- 385
           L S       L   W  +        AWQ+   I   F             +        
Sbjct: 5   LESLGWTGRYLWAGWAGLSGIFCFLAAWQAGHEIYGSFILPSPGETFAAIGLLAARPDFF 64

Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
                +  R +    IA+ I    G+  G+       ++P   +L   P   +  L +  
Sbjct: 65  AILSQSAVRALTGFAIAAGIGTVAGVLAGYSFAAMRLMKPVVTVLLGVPPIGWIVLALIW 124

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                        + ++  +        + G +      + +A +F    +   R + +P
Sbjct: 125 FGSSGGT----AIMTVVIASAPVSFAGALEGVAKRDRQLEVMAQAFGAPWFYRLRTVTMP 180

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            +  Y      T  G AW  ++++E+ S       + G+G  +A +       +V   + 
Sbjct: 181 HVLSYLFPAWTTTAGSAWKVTVMAELLS------NSGGIGGELATARALFDIAQVSAWLT 234

Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583
           I     L  +  L H L     R
Sbjct: 235 ITVGLALLTDYGLLHLLREALER 257


>gi|326623390|gb|EGE29735.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 209

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 86/213 (40%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L M ++    ++ +IP +   
Sbjct: 4   NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLAMPVLGAATLLLTIPSIALF 63

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 64  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 120

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 121 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGS 173

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 174 DIRMLIAGALMICLLAIVLDWLLHRLQVVLTPK 206



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +  Y+  L    ++ V + + +A II +P+G+ I     ++  +   A LL   P+  
Sbjct: 2   LDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLAMPVLGAATLLLTIPSIA 61

Query: 433 FFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            F L++   S       +  ++  +   +   I+ N      + P   +E      +T W
Sbjct: 62  LFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFW 121

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  R++ +P   P    G  TA         ++ V   G + L                 
Sbjct: 122 QRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGSD 174

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
              ++ G L++C   + L+  L  
Sbjct: 175 IRMLIAGALMICLLAIVLDWLLHR 198


>gi|260598009|ref|YP_003210580.1| glycine betaine/carnitine/choline transport system permease opuCB
           [Cronobacter turicensis z3032]
 gi|260217186|emb|CBA31041.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Cronobacter turicensis z3032]
          Length = 215

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 86/213 (40%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +L A+ ++++       L  + + L   ++ +  ++ +IP +   
Sbjct: 10  NAGFLASLTFQHLWLVLLAVGLAIIIGVPLGILIVRHKWLATPVLGLATLVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALMICLLAIILDWLLHRLQVVLTPK 212



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  ++  L    ++ V++ + +A II +P+GI I     +++ +   A L+   P
Sbjct: 5   HYMIDNAGFLASLTFQHLWLVLLAVGLAIIIGVPLGILIVRHKWLATPVLGLATLVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALMICLLAIILDWLLHR 204


>gi|224826301|ref|ZP_03699403.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224601402|gb|EEG07583.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 381

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 12/189 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF---LTFT 119
           +   R    +   ++ + +        A +  R   VL   L+I+Q++P L     L   
Sbjct: 175 EALGRHLQLVGLTLLPAGVGGAALGLWAFRRPRARGVLFAALNIIQTVPSLALFGLLIAP 234

Query: 120 VVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           +     L PG  +       A+ A+    +  M  S    L  IP  + E +R   LS  
Sbjct: 235 LAALGRLLPGSGLAGIGLPPALLALTLYGLLPMARSTLAGLQQIPDGVLEAARGMGLSAG 294

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q++  + +P ++P L+  + ++        + +  +     +I   G G+ +   +    
Sbjct: 295 QRWRRVELPLALPVLISGLRVT-------AIQAVGLAQLAALIGAGGFGAIMFQGLSGSA 347

Query: 238 LLAILYAML 246
           L  +L  ++
Sbjct: 348 LDLVLLGVI 356



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS-CVSYYH 445
           +  V + ++ A +    +G+W   RP     +     ++   P+   F L+++   +   
Sbjct: 181 LQLVGLTLLPAGVGGAALGLWAFRRPRARGVLFAALNIIQTVPSLALFGLLIAPLAALGR 240

Query: 446 LNPNLWLS--------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           L P   L+        L +       +  + +AG    P+   E A    ++  + WR +
Sbjct: 241 LLPGSGLAGIGLPPALLALTLYGLLPMARSTLAGLQQIPDGVLEAARGMGLSAGQRWRRV 300

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  ++G       A   + ++ +   G       G GA + +     +   V+L
Sbjct: 301 ELPLALPVLISGLRVTAIQAVGLAQLAALIGAG-------GFGAIMFQGLSGSALDLVLL 353

Query: 558 GVL 560
           GV+
Sbjct: 354 GVI 356


>gi|111024954|ref|YP_707374.1| taurine ABC transporter permease [Rhodococcus jostii RHA1]
 gi|111026272|ref|YP_708555.1| taurine ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110823933|gb|ABG99216.1| probable ABC transporter, permease component 1 [Rhodococcus jostii
           RHA1]
 gi|110825115|gb|ABH00397.1| probable ABC transporter, permease component 1 [Rhodococcus jostii
           RHA1]
          Length = 269

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   ++    +  +  +P+G+ +     +   ++PF     A P  +F+P++V+ +   +
Sbjct: 80  TSVTILAAFALGVLGGVPLGVLLWRVRVVGRVLEPFIVTGYAMPTLLFYPILVAVLGL-N 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             P + ++  M       I    +           ++A S   +  + +  ++ P   P 
Sbjct: 139 AGPIIVIASTMALI---PIALTTMVALGDVKPVLHKLARSVDASRRQQYFKVLFPAATPL 195

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              G       A   +I  E        L + GLG        +    ++   + I+  F
Sbjct: 196 IFPGIKLGFIYAVIGTIAMEFI------LASKGLGFRAGFMYRELYVADMWAYIAIVVVF 249

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
            +A+N  L         R +R
Sbjct: 250 SIAVNSAL-----GLAERAIR 265



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 14/219 (6%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +   P +I+  V   +         +RT++ +L+A  + +L       L  + R +G VL
Sbjct: 53  QMVAPSEILAHVAAIIPSTHFVTDLTRTSVTILAAFALGVLGGVPLGVLLWRVRVVGRVL 112

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +    ++P L F    V                  I    T  +  +  +   +L +
Sbjct: 113 EPFIVTGYAMPTLLFYPILVAVLGLNAGP--------IIVIASTMALIPIALTTMVALGD 164

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L +++RS   S  Q+++ +  P + P +   + +         +A E I      +
Sbjct: 165 VKPVLHKLARSVDASRRQQYFKVLFPAATPLIFPGIKLGFIYAVIGTIAMEFI------L 218

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              G+G       +E  +  +   +  ++      +  L
Sbjct: 219 ASKGLGFRAGFMYRELYVADMWAYIAIVVVFSIAVNSAL 257


>gi|189347112|ref|YP_001943641.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           limicola DSM 245]
 gi|189341259|gb|ACD90662.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           limicola DSM 245]
          Length = 448

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       +      +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGVIAAVYFTEYAREGFFNSILRSANSTLAGVPSIVFGLFGLAFFINTLKVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++ ++P+  +E S S   + W     + +P ++PG
Sbjct: 293 SKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASLSLGSTKWNTIMTVILPAALPG 352

Query: 192 LVWNMMMSMSGG 203
           ++   ++S+   
Sbjct: 353 IITGGVISLGRA 364



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 19/183 (10%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISS 416
            G++ +      +   IW      F + V    A +   P+G+               +S
Sbjct: 203 WGFLTDSSVDSHIFGGIWPEIQGTFFLAVG---AMLFAFPLGVIAAVYFTEYAREGFFNS 259

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----G 471
            ++     LA  P+ V F L         L  +   S+L    T   ++   I       
Sbjct: 260 ILRSANSTLAGVPSIV-FGLFGLAFFINTLKVSESKSVLAGSLTLAIMILPTIIRAAEEA 318

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVAS 528
             + P  +KE + S   T W     +ILP   P  +TG + + G A       I +   S
Sbjct: 319 ILSVPKTYKEASLSLGSTKWNTIMTVILPAALPGIITGGVISLGRAAGETAPIIFTAAVS 378

Query: 529 WGH 531
            G 
Sbjct: 379 VGS 381


>gi|220922237|ref|YP_002497539.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219946844|gb|ACL57236.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 268

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 10/220 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  +   +    +  + +      +G      T+     V     +T+   ++   I + 
Sbjct: 23  LGGVFLWWLLTALDLIPVFFFGDPVGVARQLATWFASGTVFTHLSVTLIETLLAFGIGTA 82

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + + +G+W+   P ++    PF +   + P  +F P+                  L +  
Sbjct: 83  LGLGIGLWLALNPFLAEVFDPFIKAFNSMPRLIFAPIFALWFGLG----IWSKVALGVTL 138

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + + FNV  G                    +  R++ LP    +  +    A G A+ 
Sbjct: 139 VFFVVFFNVFQGVREVSPVVLANTRMLGAGPRQLLRHVYLPSATSWVFSSLHNAVGIAFV 198

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
            S+V E            G+G  I  +        V+ G+
Sbjct: 199 GSVVGEYLG------SERGVGYLILLAEGVFDINAVIAGI 232



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 80/248 (32%), Gaps = 22/248 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +  + +I +   G      P  +   +       ++  + S T +  L A  I   
Sbjct: 28  LWWLLTALDLIPVFFFG-----DPVGVARQLATWFASGTVFTHLSVTLIETLLAFGIGTA 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                    A +  L  V  P +    S+P L F     ++F      KV        F 
Sbjct: 83  LGLGIGLWLALNPFLAEVFDPFIKAFNSMPRLIFAPIFALWFGLGIWSKVALGVTLVFFV 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F +          Q +  +   +   +R       Q   ++ +P +   +  ++  ++ 
Sbjct: 143 VFFNVF--------QGVREVSPVVLANTRMLGAGPRQLLRHVYLPSATSWVFSSLHNAVG 194

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---L 258
             +   V  E +          G+G  I LA    D+ A++  +L +     L D     
Sbjct: 195 IAFVGSVVGEYLG------SERGVGYLILLAEGVFDINAVIAGILLLTVFALLLDIAVSF 248

Query: 259 LFRPMIVW 266
           L   ++ W
Sbjct: 249 LENHLLRW 256


>gi|283785193|ref|YP_003365058.1| ABC transporter membrane protein [Citrobacter rodentium ICC168]
 gi|282948647|emb|CBG88238.1| putative ABC transporter membrane protein [Citrobacter rodentium
           ICC168]
          Length = 215

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L          +L A+ ++++       L  + + L   ++    +M +IP +   
Sbjct: 10  NAGYLASLTFEHLWLVLLAVGLAIIIGVPLGVLIVRHKWLATPVLSFATLMLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P  +P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMVLPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DIRMLIAGALLICLLAIVLDWLLHRLQVVLTPK 212



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           HF   +  Y+  L    ++ V++ + +A II +P+G+ I     +++ +  FA L+   P
Sbjct: 5   HFMIDNAGYLASLTFEHLWLVLLAVGLAIIIGVPLGVLIVRHKWLATPVLSFATLMLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P + P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMVLPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDIRMLIAGALLICLLAIVLDWLLHR 204


>gi|156933297|ref|YP_001437213.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531551|gb|ABU76377.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894]
          Length = 377

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
            +R    +   +  +++       L  +  R    L   L+I+Q++P +      +    
Sbjct: 169 TARHLTLLFGTLAPAVVIGLPLGILCHRRPRWQPGLFAALNIIQTVPSVALFGLLMAPLA 228

Query: 122 ----YFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                F  L    V G  LA A+ A+    +  +   +   L  +P  + E +R   +S 
Sbjct: 229 GLAQAFPALGALGVSGTGLAPALIALTLYALLPLVRGVVAGLGQVPDAVRESARGVGMSA 288

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+ W++ VP ++P  + ++ +         V + +I  G       G G+ +   +   
Sbjct: 289 WQRLWHVDVPLALPVWLRSLRVVAVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 341

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L  ++ ++ +  + D L 
Sbjct: 342 ALDLVLLGVIPVVALAVVLDALF 364



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 92/272 (33%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L   L V      +   +L       ++L +  +     + +   + ++  +  +   
Sbjct: 102 SGLWLMLAVSLLAASDAIGRLTRQPLGRWLLQVQIWIAPLWLLLSGHFDALSLLKEYANR 161

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q V        +T+      +  A +I +P+GI    RP     +     ++   P+   
Sbjct: 162 QTVFDDATARHLTLL--FGTLAPAVVIGLPLGILCHRRPRWQPGLFAALNIIQTVPSVAL 219

Query: 434 FPLVVSCVSYY------------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + +       ++  V+AG    P+  +E
Sbjct: 220 FGLLMAPLAGLAQAFPALGALGVSGTGLAPALIALTLYALLPLVRGVVAGLGQVPDAVRE 279

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++ W+   ++ +P   P ++             ++V+ +   G       G GA
Sbjct: 280 SARGVGMSAWQRLWHVDVPLALPVWLRSLRVVAVQTVGMAVVAALIGAG-------GFGA 332

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    + L+   
Sbjct: 333 LVFQGLLSSALDLVLLGVIPVVALAVVLDALF 364


>gi|66047479|ref|YP_237320.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63258186|gb|AAY39282.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330969556|gb|EGH69622.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 237

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 74/194 (38%), Gaps = 17/194 (8%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPI 103
              + I  I      L  Y     + +L +M+ +L+         ++   +G     + I
Sbjct: 23  IHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALSRPSMVGRAERFMQI 82

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
            +I  ++P L  L   +                 AIFA+F + +  +  + Y+ L N+  
Sbjct: 83  FNIGNTVPPLAVLAIALGILGIGSGP--------AIFALFLASLLPIVRNTYEGLKNVQG 134

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            L+E +    ++  Q  W + +P ++P ++  + ++++       A    ++G       
Sbjct: 135 SLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI--NVGTAPLAFLIGANS---- 188

Query: 224 GIGSYIALAIKEQD 237
            +GS I   I   +
Sbjct: 189 -LGSLIFPGIALNN 201



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   V I +    I +I      Q    +++     +  V+V ++ A ++ IP GI + 
Sbjct: 9   LLGGAVTIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALS 68

Query: 410 ---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|298736521|ref|YP_003729047.1| osmoprotection protein ProWX [Helicobacter pylori B8]
 gi|298355711|emb|CBI66583.1| Osmoprotection protein (ProWX) [Helicobacter pylori B8]
          Length = 553

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 73/220 (33%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +A+ +    + Y++  F +   +Y I L       V +  ++  +  + +G+++ +   
Sbjct: 29  LIAMALKISVVKYLIKEF-HDRFIYFIDLIAQHFIIVALSSLLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A        ++  +A  G + 
Sbjct: 144 EAREEVIKAAIGLGCNPKELFFKVRFLLAIPQILVGLRIA------VVMLVAMAGIGALI 197

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  A I       +   +V G  I+  F +  ++F+
Sbjct: 198 GAGGLGQA-IFRGLNTQNTTLLVAGSFIIALFSVLADQFV 236



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  + ++ L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSLLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFKVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|148258654|ref|YP_001243239.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146410827|gb|ABQ39333.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 271

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 7/163 (4%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P+A +L   P     PL++  +            +       + +L N   
Sbjct: 96  SRWLEWALFPYAVVLQVTPVIAIAPLLLIYLPQQTAVVTCAWIV-----GFFPVLSNTAL 150

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G ++   +   +   +  + W+  RY+ LP   PY + G   A G +   ++V+E+A+  
Sbjct: 151 GLNSVDRNLAGLFQLYGASRWQTLRYLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGS 210

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   L   IAES  + + P +   ++++    + +   L
Sbjct: 211 AGAGSG--LAYRIAESGYRLNIPRMFAALVLLSVAGIVIYGLL 251



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 89/228 (39%), Gaps = 11/228 (4%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + + L+GIQ   +P  ++ +  +  D   L Q    T +  L   + + L     A L  
Sbjct: 35  VVVRLNGIQPYVLPGPLLVLKTLVSDWDILAQSLLTTLITTLEGFIAAALGGIALALLFN 94

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +SR L   L P   ++Q  P++      ++Y         +  + A +   +    + + 
Sbjct: 95  QSRWLEWALFPYAVVLQVTPVIAIAPLLLIY---------LPQQTAVVTCAWIVGFFPVL 145

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    L ++ R+L  + + +  S WQ   YL +P ++P ++  + ++        V +E
Sbjct: 146 SNTALGLNSVDRNLAGLFQLYGASRWQTLRYLKLPAALPYILGGLRIAGGLSLIGAVVAE 205

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +            +   IA +    ++  +  A++ +     +   LL
Sbjct: 206 IAAGSAGAGSG--LAYRIAESGYRLNIPRMFAALVLLSVAGIVIYGLL 251


>gi|322372039|ref|ZP_08046581.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320548461|gb|EFW90133.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 243

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 15/203 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   L +      + ++ ++ ++++       LA    RLG  ++    ++ ++P +
Sbjct: 24  LSKNQSLLWELLINHIIVVIDSVWLAVVIGVPLGILATFDDRLGKAILWTAGMLMTVPSI 83

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                    F  L P   IG     I  +  +Q+  +  + Y  L  +     E  R   
Sbjct: 84  AL-------FGLLIPLVGIGKIPVVIALVLYAQL-PIVRNTYVGLTQVDSATIEAGRGMG 135

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  Q+   + +P ++P ++  +          VV    I      I    +G  I   I
Sbjct: 136 MTRRQRLQRIQLPQAIPVIMAGVR-------NAVVILIGIAAIGAFIGANNLGDPIFSGI 188

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
            E    AI+ + + +  +   +D
Sbjct: 189 SEAYPAAIVVSTVAVSLLALAFD 211



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 11/181 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + +A +I +P+GI   F   +   I   A +L   P+   F L++  V        
Sbjct: 42  VIDSVWLAVVIGVPLGILATFDDRLGKAILWTAGMLMTVPSIALFGLLIPLVGIG----K 97

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + + + ++   Q  I+ N   G +   +   E      +T  +  + I LP   P  + G
Sbjct: 98  IPVVIALVLYAQLPIVRNTYVGLTQVDSATIEAGRGMGMTRRQRLQRIQLPQAIPVIMAG 157

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + +       +       LG  I     +     +V+  + +    LA 
Sbjct: 158 VRNAVVILIGIAAIGAFIGANN-------LGDPIFSGISEAYPAAIVVSTVAVSLLALAF 210

Query: 570 N 570
           +
Sbjct: 211 D 211


>gi|114763105|ref|ZP_01442531.1| putative choline uptake ABC transporter permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114544158|gb|EAU47167.1| putative choline uptake ABC transporter permease protein
           [Roseovarius sp. HTCC2601]
          Length = 389

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 71/198 (35%), Gaps = 9/198 (4%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYF 123
           R       ++ ++    F    L  ++ R+   L+P+L  +Q+IP L         + + 
Sbjct: 181 RHLGLAFGSLAVAAAIGFPLGILCHRNARMRAALLPVLSFLQTIPSLAMFGIMIPLLGWV 240

Query: 124 MNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  PG             A  A+    +  +  +    L + P    + +R   ++  Q
Sbjct: 241 GDSVPGAEALGIAGIGFAPAFLALVLYSLLPVVANTVAGLDSTPPAARDAARGMGMTSRQ 300

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + W + +P  +P ++  + + +       V+A+ +   G       G+       I    
Sbjct: 301 RLWQVELPLGLPVILAGLRIVLVQNIGLAVIAALIGGGGFGTFVFQGLNQTATDLILLGA 360

Query: 238 LLAILYAMLTMLGVIFLY 255
           L  +  A++  + +  L 
Sbjct: 361 LPTVALALIAAIVMDILV 378



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 13/193 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN- 449
              + +A+ I  P+GI       + + + P    L   P+   F +++  + +   +   
Sbjct: 187 FGSLAVAAAIGFPLGILCHRNARMRAALLPVLSFLQTIPSLAMFGIMIPLLGWVGDSVPG 246

Query: 450 -----------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          L ++  +   ++ N +AG  + P   ++ A    +T  +    + 
Sbjct: 247 AEALGIAGIGFAPAFLALVLYSLLPVVANTVAGLDSTPPAARDAARGMGMTSRQRLWQVE 306

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           LP   P  + G           A I + +   G       GL     +    G+ P V L
Sbjct: 307 LPLGLPVILAGLRIVLVQNIGLAVIAALIGGGGFGTFVFQGLNQTATDLILLGALPTVAL 366

Query: 558 GVLIMCCFVLALN 570
            ++      + + 
Sbjct: 367 ALIAAIVMDILVE 379


>gi|308184603|ref|YP_003928736.1| osmoprotection protein (proWX) [Helicobacter pylori SJM180]
 gi|308060523|gb|ADO02419.1| osmoprotection protein (proWX) [Helicobacter pylori SJM180]
          Length = 553

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++L          VAI +    + Y+V  F +   +Y I L       V +   +  +  
Sbjct: 17  WLLHSIDVATQHLVAIMLKISMVKYLVKEF-HDRFIYFIDLLAQHFIIVALSSFLVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G LI+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSLIIALFSILADQFV 236



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SILADQFV 236


>gi|283785927|ref|YP_003365792.1| ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282949381|emb|CBG88992.1| ABC transporter permease protein [Citrobacter rodentium ICC168]
          Length = 385

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +L  ++ +L            S      +  +L+I+Q+IP +      +    
Sbjct: 177 LAQHLTLLLGTVLPALAIGVPLGIWCWFSAARQGPVFTVLNIIQTIPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       A L         A+ A+    +  +   +   L  +PRD++E +R+  +SG
Sbjct: 237 GLVKAFPWLASLGVAGTGMTPALIALVLYALLPLVRGVVAGLDQVPRDVQESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 VQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AVDLVLLGVIPVIMLAVLIDALF 372



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 95/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L +    V   +    A+  +  +  +   Q+V        +T+ 
Sbjct: 125 DAIRRITAQPLWRWVLHMQIAIVPLALLFSGAFDHLSLLKEYANRQEVFDDALAQHLTLL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +  ++ A  I +P+GIW  F       +     ++   P+   F L+++ ++      
Sbjct: 185 --LGTVLPALAIGVPLGIWCWFSAARQGPVFTVLNIIQTIPSVALFGLLIAPLAGLVKAF 242

Query: 449 NLWLS------------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               S            + ++      ++  V+AG    P D +E A +  ++G + + +
Sbjct: 243 PWLASLGVAGTGMTPALIALVLYALLPLVRGVVAGLDQVPRDVQESARAMGMSGVQRFLH 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 303 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAVDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIMLAVLIDALF 372


>gi|116629211|ref|YP_814383.1| ABC-type phosphate transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|116094793|gb|ABJ59945.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus gasseri ATCC 33323]
          Length = 331

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A   A       S++    L  +++++  IP + +    LT  V +
Sbjct: 116 FSVTLLAALVATPFAIAVALFMTEYSSKKGARFLQSVIELLVGIPSVVYGFLGLTIIVPF 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 176 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 268



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I +            + 
Sbjct: 88  VFQFLTSSDWDPGEGKSHVGAAAMIITSFSVTLLAALVATPFAIAVALFMTEYSSKKGAR 147

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 148 FLQSVIELLVGIPSVVYGFLGLTIIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 207

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 208 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 267

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 268 NAVLMPAN 275


>gi|331701700|ref|YP_004398659.1| phosphate ABC transporter inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129043|gb|AEB73596.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
          Length = 309

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 21/214 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  + A ++S  F    A        +R   +L P+ +++  IP + +    L+  V 
Sbjct: 91  SFLVTILAALLSTPFAIGTAVYMTEISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVP 150

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  N + G   G  L+  F +F   +  +      SL  +P+   + S +   + WQ  W
Sbjct: 151 FVRNTFGGSGFGI-LSGTFVLFVMILPTIVSMTVDSLRGVPKFYRQASLALGATKWQTIW 209

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGS 227
            + +  + PG++  ++  M+  +   +A +M++                 T +   G+G+
Sbjct: 210 KVVLRAATPGILTAVVFGMARAFGEALAVQMVIGNAALMPQNLTSPASTLTSVLTAGMGN 269

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +  +++   L ++   +L M     L   ++ R
Sbjct: 270 TVMGSLQNDALWSLALVLLVMSLFFNLLVHMIGR 303



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/230 (11%), Positives = 76/230 (33%), Gaps = 23/230 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLA 426
                   +  + +   +    ++  ++++   I   +++        +  +QP  +LL 
Sbjct: 74  KTPGGHQAVGALPMIVGSFLVTILAALLSTPFAIGTAVYMTEISPKRGAKILQPVTELLV 133

Query: 427 AFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDF 479
             P+ V+  + +S V       +      +     ++F      +    +      P  +
Sbjct: 134 GIPSVVYGFIGLSVVVPFVRNTFGGSGFGILSGTFVLFVMILPTIVSMTVDSLRGVPKFY 193

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH-------- 531
           ++ + +   T W+    ++L    P  +T  +     A+  ++  ++             
Sbjct: 194 RQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVIGNAALMPQNLT 253

Query: 532 ------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                   + T G+G  +  S +  +   + L +L+M  F   L   +  
Sbjct: 254 SPASTLTSVLTAGMGNTVMGSLQNDALWSLALVLLVMSLFFNLLVHMIGR 303


>gi|256959990|ref|ZP_05564161.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|293383741|ref|ZP_06629648.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis R712]
 gi|293388783|ref|ZP_06633276.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis S613]
 gi|312907044|ref|ZP_07766040.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312978700|ref|ZP_07790427.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|256950486|gb|EEU67118.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|291078817|gb|EFE16181.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis R712]
 gi|291081940|gb|EFE18903.1| glycine betaine/L-proline ABC transporter, permease protein
           [Enterococcus faecalis S613]
 gi|310627029|gb|EFQ10312.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|311288407|gb|EFQ66963.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
          Length = 220

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 66/180 (36%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  +  + +       + ++ R L   ++ + +I+Q++P L  L+  ++    
Sbjct: 26  LRHFLISIYGVSFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAMLSILMLGMGL 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  +  + R++ +V +   ++  Q  + + +
Sbjct: 86  GV--------NTVVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQLLYMVEL 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+   
Sbjct: 138 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGASIILVG 190



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  YV           +  +  A+I+ IP+GI I  +  +++ I   A ++   PA   
Sbjct: 16  QNGGYVFQQFLRHFLISIYGVSFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAM 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + + +   +   I+ N   G      +  +V     +T  + 
Sbjct: 76  LSILMLGMGLGVNT----VVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQL 131

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP      + G   A   A   + +      G       GLG  I   T      
Sbjct: 132 LYMVELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGA 184

Query: 554 EVVL 557
            ++L
Sbjct: 185 SIIL 188


>gi|81428116|ref|YP_395115.1| phosphate ABC transporter transmembrane protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78609757|emb|CAI54803.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 307

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 71/166 (42%), Gaps = 8/166 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILG 114
           +V +LP     +      A +++  F             +R   +L P+++++  IP + 
Sbjct: 79  EVGALP-MIMGSFGVTFLAALLATPFAIGAGIFMTEISPKRGEKILQPVMELLVGIPSVV 137

Query: 115 F----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           +    L+  V    +++ G   G  LA    +F   +  +T     +L ++PR   E S 
Sbjct: 138 YGFIGLSVVVPTMRHIFGGSGFGI-LAGTCVLFIMILPTVTSMTVDALKSVPRHYREASL 196

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +   + WQ  W + +  + PG++  ++  M+  +   +A +M++  
Sbjct: 197 ALGATRWQTTWKVVLKAATPGILTGVVFGMARAFGEALAVQMVIGN 242



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--F 434
            + +   +     +  ++A+   I  GI++           +QP  +LL   P+ V+   
Sbjct: 82  ALPMIMGSFGVTFLAALLATPFAIGAGIFMTEISPKRGEKILQPVMELLVGIPSVVYGFI 141

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFKEVASSFHIT 489
            L V   +  H+       +L      + ++        +    + P  ++E + +   T
Sbjct: 142 GLSVVVPTMRHIFGGSGFGILAGTCVLFIMILPTVTSMTVDALKSVPRHYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+    ++L    P  +TG +     A+  ++  ++       +        I+ ++  
Sbjct: 202 RWQTTWKVVLKAATPGILTGVVFGMARAFGEALAVQMVIGNAALMPHN----LISPASTL 257

Query: 550 GSFPEVVLGVLIMCCF 565
            S   + +G  +M   
Sbjct: 258 TSVLTMGIGNTVMGSL 273


>gi|85707410|ref|ZP_01038491.1| ABC transporter, permease protein [Roseovarius sp. 217]
 gi|85668066|gb|EAQ22946.1| ABC transporter, permease protein [Roseovarius sp. 217]
          Length = 315

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            H  +QD +     G +T + +       + I       I   P +   + P    +AA 
Sbjct: 108 THILWQDFVQTALKGALTGYIMGCGAAFLTAIA------IDRFPFLQRGLLPVGNFVAAL 161

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P++V    +   +    + +++ F     +L N + G +      +++  ++  
Sbjct: 162 PIIGMAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVQGLTDTDAMQRDLMRTYAA 217

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W+    + LP   P+   G   A   A   +IV+E            G+G  I+ S  
Sbjct: 218 GYWQTLFKLRLPAAMPFLFNGLKIATTLALIGAIVAEFFGSPIK-----GMGFRISTSVG 272

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           + +   V   +++        
Sbjct: 273 QLALDLVWAEIVVAAIAGSGF 293



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 14/228 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTF 84
           VL+I  + +   GI    +P             H L Q   +T L+  L+  ++     F
Sbjct: 76  VLIIWELTVTSFGISPVLLPAPTAIAATFAKSTHILWQDFVQTALKGALTGYIMGCGAAF 135

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A    +   L   L+P+ + + ++PI+G     V++F   +  K     +   F    
Sbjct: 136 LTAIAIDRFPFLQRGLLPVGNFVAALPIIGMAPILVMWFGFDWQSKAAVVVVMVFF---- 191

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                M  +  Q L +      ++ R++    WQ  + L +P +MP L   + ++ +   
Sbjct: 192 ----PMLVNTVQGLTDTDAMQRDLMRTYAAGYWQTLFKLRLPAAMPFLFNGLKIATTLAL 247

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +E         P+ G+G  I+ ++ +  L  +   ++      
Sbjct: 248 IGAIVAEFFGS-----PIKGMGFRISTSVGQLALDLVWAEIVVAAIAG 290


>gi|332706624|ref|ZP_08426685.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
 gi|332354508|gb|EGJ33987.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Lyngbya majuscula 3L]
          Length = 118

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  ++  IP ++  V+ +   +     + + +P ++P ++  M ++++G W F+V +E+
Sbjct: 1   MIADAVKFIPDEMLNVAYTLGANRVDVLFRVILPATLPNIIDTMRVNVAGAWNFLVIAEL 60

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269
           I   +      G+G  I    +  +   +L+ +L +  +  + D     LFR  + WS +
Sbjct: 61  IAAEN------GLGFKIIYFQRFLETDKVLFCILVIGLIGLMLDFAFRWLFRLTVPWSEQ 114

Query: 270 F 270
           F
Sbjct: 115 F 115



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +       P++   VA +           +ILP   P  +        GAWN  +++E+
Sbjct: 1   MIADAVKFIPDEMLNVAYTLGANRVDVLFRVILPATLPNIIDTMRVNVAGAWNFLVIAEL 60

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            +         GLG  I          +V+  +L++    L L+ F +  L+   
Sbjct: 61  IA------AENGLGFKIIYFQRFLETDKVLFCILVIGLIGLMLD-FAFRWLFRLT 108


>gi|238757281|ref|ZP_04618468.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           aldovae ATCC 35236]
 gi|238704659|gb|EEP97189.1| Inner membrane ABC transporter permease protein yehY [Yersinia
           aldovae ATCC 35236]
          Length = 384

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 80/197 (40%), Gaps = 17/197 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+ +V +++       L  +  R    +   L+I+Q+IP +      +    +L     
Sbjct: 184 LLATLVPAIVLGIPLGLLCFRVPRFQRAIFSTLNIIQTIPSIALFGLLIAPLASLAAAIP 243

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ +
Sbjct: 244 WLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLFFRV 303

Query: 184 GVPFSMPGLVWNMM-MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             P +MP ++  +  +S+      VVA+        +I   G+G+ +   +    L  +L
Sbjct: 304 QTPIAMPLILSGIRIISVQTVGLAVVAA--------LIGAGGLGAIVFQGLLSSALDLVL 355

Query: 243 YAMLTMLGVIFLYDQLL 259
             ++ ++ +  + D L 
Sbjct: 356 LGVIPVIVMAVIVDSLF 372



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +++ +   +     + ++     V  +       ++  +  +F  +DV        + + 
Sbjct: 125 DSWSRAIVSPAWRSLANVLLILPVAVLLTTGQLNNLSLMKEYFNREDVFDDALWQHVQIL 184

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +  ++ A ++ IP+G+     P     I     ++   P+   F L+++ ++      
Sbjct: 185 --LATLVPAIVLGIPLGLLCFRVPRFQRAIFSTLNIIQTIPSIALFGLLIAPLASLAAAI 242

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++ NV+AG  A P+   E A    +T  + +  
Sbjct: 243 PWLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLFFR 302

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  P   P  ++G           ++V+ +   G       GLGA + +     +   V+
Sbjct: 303 VQTPIAMPLILSGIRIISVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVL 355

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 356 LGVIPVIVMAVIVDSLF 372


>gi|227823025|ref|YP_002826997.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sinorhizobium fredii NGR234]
 gi|227342026|gb|ACP26244.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sinorhizobium fredii NGR234]
          Length = 294

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 71/208 (34%), Gaps = 9/208 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           +L    +         +        SL  +A  T    L    I      + A     +R
Sbjct: 64  VLPAPHQVVAEIWDTTVNRAITSKRSLVYHAWITLSATLLGFGIGAALGVLLAVGIVHNR 123

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            +   L+P +   Q+IPIL      +V    +    ++   L + +  F   V  M   +
Sbjct: 124 AMDRSLMPWVIASQTIPILAIAPMIIVVLNAIGIAGLLPKALISTYLSFFPVVVGMVKGL 183

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             S   I  DL     ++  S  Q FW L  P SMP L  ++ ++++      +  E+  
Sbjct: 184 R-SPETIQLDLM---HTYNASPVQTFWKLRWPSSMPYLFTSLKVAVAISLVGAIVGEL-- 237

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                  + G+G+ +         + I 
Sbjct: 238 ---PTGAVAGLGARLLAGSYYGQTVQIW 262



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   I + + + + + I     +   + P+       P     P++
Sbjct: 89  SLVYHAWITLSATLLGFGIGAALGVLLAVGIVHNRAMDRSLMPWVIASQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   L  +L+  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 149 IVVLNAIGIAGLLPKALISTYLSFFPVVVGMVKGLRSPETIQLDLMHTYNASPVQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RWPSSMPYLFTSLKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 262


>gi|119962177|ref|YP_948526.1| ABC-type proline/glycine betaine transport systems, permease
           component [Arthrobacter aurescens TC1]
 gi|119949036|gb|ABM07947.1| ABC-type proline/glycine betaine transport systems, permease
           component [Arthrobacter aurescens TC1]
          Length = 246

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 15/206 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +  +  +  M++ LL +   A LA ++  L  V+     ++ +IP L           
Sbjct: 15  AGQHMVLAIIPMILGLLISVPLAQLARRNSTLRSVVATATSLLYTIPSLALFIILPTIL- 73

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  I   L  + A+    V  +  +   +  ++  DL   + +       +F+ + 
Sbjct: 74  ----GTRILDPLNVVVALTIYAVALLVRAAMDAFDSVDDDLRNAAVAMGFKPLARFFQVD 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P L   + +        V  + ++ VG+       +G      ++   +  ++  
Sbjct: 130 LPLSLPVLFAGLRVVSVSNISLVSVAALLGVGN-------LGVLFTDGLQRTFITEVVVG 182

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWS 267
           ++ +L +  L D    +L R +  WS
Sbjct: 183 IIAILVLALLMDAVLVVLERLLTPWS 208



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 8/202 (3%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   V+ L    M   ++ +I+  +I +P+         + S +     LL   P+ 
Sbjct: 4   FLANSGMVLGLAGQHMVLAIIPMILGLLISVPLAQLARRNSTLRSVVATATSLLYTIPSL 63

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             F ++ + +    L+P   +  L I+     ++   +    +  +D +  A +      
Sbjct: 64  ALFIILPTILGTRILDPLNVVVALTIYAVA-LLVRAAMDAFDSVDDDLRNAAVAMGFKPL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +  + LP   P    G         +   V+ +   G+       LG    +  ++  
Sbjct: 123 ARFFQVDLPLSLPVLFAGLRVVSVSNISLVSVAALLGVGN-------LGVLFTDGLQRTF 175

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             EVV+G++ +    L ++  L
Sbjct: 176 ITEVVVGIIAILVLALLMDAVL 197


>gi|313885195|ref|ZP_07818947.1| choline transport system permease protein opuBB [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619886|gb|EFR31323.1| choline transport system permease protein opuBB [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 211

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 68/177 (38%), Gaps = 15/177 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L  +  ++   ++ +  I+Q++P L  L   +                 AI A+F 
Sbjct: 36  PLGILLTRFPKVANFVISLAAILQTVPTLALLALMIPIIGIG--------RFPAIVALFI 87

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  +    +  +   +++ ++   ++ W+    + +P +MP ++  + +S     
Sbjct: 88  YSLLPILRNTNIGVDKVTPYIKDAAKGMGMTNWESITQVEIPMAMPVIMAGIRLSAVYAV 147

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +   +  I  G       G+G +I   ++   +  IL   + +  +  L D +L +
Sbjct: 148 AWATLASYIGAG-------GLGDFIFNGLELYRIDFILAGTIPVTFLALLTDFILGK 197



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 11/171 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +   P +++ +   A +L   P      L++  +            + +   +  
Sbjct: 36  PLGILLTRFPKVANFVISLAAILQTVPTLALLALMIPIIGIGR----FPAIVALFIYSLL 91

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N   G        K+ A    +T W     + +P   P  + G   +   A   + 
Sbjct: 92  PILRNTNIGVDKVTPYIKDAAKGMGMTNWESITQVEIPMAMPVIMAGIRLSAVYAVAWAT 151

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++     G       GLG +I    E      ++ G + +    L  +  L
Sbjct: 152 LASYIGAG-------GLGDFIFNGLELYRIDFILAGTIPVTFLALLTDFIL 195


>gi|325266979|ref|ZP_08133649.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
 gi|324981479|gb|EGC17121.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
          Length = 505

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I+Q+IP L  L   + +     P  +I   L A+  IF         + Y  L  I + 
Sbjct: 56  NILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ--------NTYLGLTQIDQS 107

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           +++   +F LS WQ  W + +P ++P ++  +  +
Sbjct: 108 IQDAYTAFGLSRWQSLWRIELPMALPAMISGIRTA 142



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 4/108 (3%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           F  +L   P+     L++  V        + L+L  +      I  N   G +      +
Sbjct: 54  FTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALL----PIFQNTYLGLTQIDQSIQ 109

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +  ++F ++ W+    I LP   P  ++G  TA       + ++ +  
Sbjct: 110 DAYTAFGLSRWQSLWRIELPMALPAMISGIRTAAVLIVGTATLAALIG 157


>gi|299143677|ref|ZP_07036757.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518162|gb|EFI41901.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 261

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 102/240 (42%), Gaps = 15/240 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L ++ V  I+++L+        P  ++  +   L           +  ++ +  +I + 
Sbjct: 29  VLFWIFVWQILSLLIPEEILFVSPLKVIPQIIKILTDKVFYVSLFASISKITTGFLIGVF 88

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  + + ++ K+     + VP++  ++S+P++ F+   + +  + Y          +I  
Sbjct: 89  FATILSIISYKNTLFKELSVPLMMFLKSVPVVSFIVLALFFVSSKY---------LSIII 139

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                   +  ++ + L +I  +  ++++ F +S  +K  Y+ +    P ++  + ++  
Sbjct: 140 SMIIATPIVYSNLIEGLISIDENYLDMAKIFDVSFNRKLNYIYLSHLKPFIISGLSLAFG 199

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIFLYDQLLF 260
             W   +A+E+I +     P  GIG+ I       D + +  Y ++ M+    L   LLF
Sbjct: 200 MAWKSGLAAEVISL-----PNFGIGTLIYNCKIYLDTVNLFAYTIIAMIVCHVLEKLLLF 254



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 18/242 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------WLGCITMFRVVV 392
           ++   L + ++  V  +   +  + I ++        ++ ++           ++ ++  
Sbjct: 22  KIKSFLIVLFWIFVWQILSLLIPEEILFVSPLKVIPQIIKILTDKVFYVSLFASISKITT 81

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             +I       + I             P    L + P   F  L +  VS  +L+    +
Sbjct: 82  GFLIGVFFATILSIISYKNTLFKELSVPLMMFLKSVPVVSFIVLALFFVSSKYLS----I 137

Query: 453 SLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            + MI  T   I++ N+I G  +   ++ ++A  F ++  R   YI L  + P+ ++G  
Sbjct: 138 IISMIIAT--PIVYSNLIEGLISIDENYLDMAKIFDVSFNRKLNYIYLSHLKPFIISGLS 195

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A G AW + + +EV S     L   G+G  I           +    +I       L +
Sbjct: 196 LAFGMAWKSGLAAEVIS-----LPNFGIGTLIYNCKIYLDTVNLFAYTIIAMIVCHVLEK 250

Query: 572 FL 573
            L
Sbjct: 251 LL 252


>gi|194467573|ref|ZP_03073560.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
 gi|194454609|gb|EDX43506.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
          Length = 221

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I+ II +P+G        ++     FAQLL   P+     L++  +    +   +
Sbjct: 33  VVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALI 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G +     +KEV  +  +   +  R I +P   PY + G 
Sbjct: 93  ALIVL----ALPPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLALPYILNGI 148

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A      +A++ + + + G   L  TGLG Y       G+    +L +L M  F   +
Sbjct: 149 KLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVMIGAVSVAILSLLAMISFDFLI 208



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 75/193 (38%), Gaps = 15/193 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            QY  +  +  +  +VIS++       + ++ + +    V    +++ IP L  L   + 
Sbjct: 22  WQYVGQHIVLTVVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIP 81

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +             + A+ A+    +  +  +       +    +EV  +  +   Q   
Sbjct: 82  FIGTGV--------VPALIALIVLALPPLLINTILGFNEVSPLYKEVGIALGMDQRQLRR 133

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +   D+  +
Sbjct: 134 QIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGLYDMSYV 186

Query: 242 LYAMLTMLGVIFL 254
           +   +++  +  L
Sbjct: 187 MIGAVSVAILSLL 199


>gi|291561237|emb|CBL40036.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SS3/4]
          Length = 257

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 19/243 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVL 393
           +  +  I ++ V+   A  +    I  +    T + +   I L         + +R+ + 
Sbjct: 9   LRRLSIILFWIVLWQTAASLIRNHIFLVGPVDTLRALCEQIVLPDFWSAIAFSFWRISIG 68

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
             +A  + +  G      P +   ++P  QL+   P   F  L +      +L      S
Sbjct: 69  FFLAFFLGLFTGSLAYRFPIVDEFLEPPVQLMKTVPVASFVILALIWTGSKNL------S 122

Query: 454 LLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           + + F   + ++  N  AG  +   +  E+A  FH+   R   YI    ++PY  +   T
Sbjct: 123 VFISFLVVYPMIHVNTKAGLISADRELLEMAEVFHVPFIRRAFYIYRTALYPYLKSACRT 182

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR- 571
           A G  + + I +EV            +G  +  +    S  E+    +++        + 
Sbjct: 183 ALGMGFKSGIAAEVIGVPDGS-----IGEGLYLAKIYLSTAELFAWTVVIILVSSLFEKG 237

Query: 572 FLW 574
           FLW
Sbjct: 238 FLW 240



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 92/239 (38%), Gaps = 13/239 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L ++++      L+        P D +  +   + +       + +  R+     ++  
Sbjct: 15  ILFWIVLWQTAASLIRNHIFLVGPVDTLRALCEQIVLPDFWSAIAFSFWRISIGFFLAFF 74

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                 +LA +   +   L P + +M+++P+  F+   +++          G++  ++F 
Sbjct: 75  LGLFTGSLAYRFPIVDEFLEPPVQLMKTVPVASFVILALIW---------TGSKNLSVFI 125

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +  +    L +  R+L E++  F +   ++ +Y+      P L      ++ 
Sbjct: 126 SFLVVYPMIHVNTKAGLISADRELLEMAEVFHVPFIRRAFYIYRTALYPYLKSACRTALG 185

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            G+   +A+E+I V D  I   G G Y+A  I         + ++ +L         L+
Sbjct: 186 MGFKSGIAAEVIGVPDGSI---GEGLYLAK-IYLSTAELFAWTVVIILVSSLFEKGFLW 240


>gi|298246846|ref|ZP_06970651.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297549505|gb|EFH83371.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 218

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 77/206 (37%), Gaps = 17/206 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + +           ++ + +LF      L  +  R    ++ ++ ++Q+IP L F    +
Sbjct: 14  ILEGIGPHLFLTGVSLGLGILFAVPLGILLTRFPRWSGPVIAVVSVLQTIPSLAFFALAL 73

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            Y               A+  +F   +  +  + Y  +  +   L + +R   ++ W+  
Sbjct: 74  PYLGIGMQP--------ALVVLFLYSLLPILRNTYVGVHAVDATLIDAARGQGMTNWEIL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P + P +V  + ++      +   + +I  G       G+G  I   +   D   
Sbjct: 126 YLVELPLAAPIIVTGIRLAAVYLVSWATLASLIGAG-------GLGDLIFAGLDSYDANL 178

Query: 241 ILYAML--TMLGVIFLYDQLLFRPMI 264
           ++   +   ML ++  +   L R ++
Sbjct: 179 LMAGAIPTAMLALLIGFVFGLVRRLV 204



 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 5/183 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F   V + +  +  +P+GI +   P  S  +     +L   P+  FF L +  +     
Sbjct: 22  LFLTGVSLGLGILFAVPLGILLTRFPRWSGPVIAVVSVLQTIPSLAFFALALPYLGIG-- 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  +++   +   IL N   G  A      + A    +T W     + LP   P  
Sbjct: 80  --MQPALVVLFLYSLLPILRNTYVGVHAVDATLIDAARGQGMTNWEILYLVELPLAAPII 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           VTG   A     + + ++ +   G +  L   GL +Y A     G+ P  +L +LI   F
Sbjct: 138 VTGIRLAAVYLVSWATLASLIGAGGLGDLIFAGLDSYDANLLMAGAIPTAMLALLIGFVF 197

Query: 566 VLA 568
            L 
Sbjct: 198 GLV 200


>gi|227819535|ref|YP_002823506.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338534|gb|ACP22753.1| ABC transporter, permease protein [Sinorhizobium fredii NGR234]
          Length = 245

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  E  +   + +  P   +  SL          +L A + + +     A L  +    
Sbjct: 23  PGWFEPLLKPLVQESAPAVYNRGSLFWLTLLHLRTVLIATLAATVVAVSLAILVTRQAGA 82

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +   +++I Q+ P +  L   V  F           E   + A+F   +  +  + 
Sbjct: 83  EFLPLSRSLVNIGQTFPPVAVLALAVPIFG--------FGEKPTLIALFLYGLLPIFENA 134

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +P  + E +R   ++  Q+   + +P ++P ++  + +S       VV S    
Sbjct: 135 LTGLTTLPPAVIEAARGAGMTERQRLLQIELPLALPVILTGIRLS-------VVISLATA 187

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              + +    +G  I   ++  +L  +L   L +  +  L 
Sbjct: 188 TIGSTVAAKTLGEVIIAGLQSNNLAFVLQGGLIVAALAVLI 228



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 17/197 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF----AQLLAAFPANV 432
             + WL  + +  V++  + A+++ + + I +       ++  P       +   FP   
Sbjct: 45  GSLFWLTLLHLRTVLIATLAATVVAVSLAILV--TRQAGAEFLPLSRSLVNIGQTFPPVA 102

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G +  P    E A    +T  +
Sbjct: 103 VLALAVPIFGFGEKPTLIALFLYGLL----PIFENALTGLTTLPPAVIEAARGAGMTERQ 158

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I LP   P  +TG   +        ++S   +     +    LG  I    +  + 
Sbjct: 159 RLLQIELPLALPVILTGIRLS-------VVISLATATIGSTVAAKTLGEVIIAGLQSNNL 211

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G LI+    + +
Sbjct: 212 AFVLQGGLIVAALAVLI 228


>gi|148544777|ref|YP_001272147.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus reuteri DSM 20016]
 gi|184154128|ref|YP_001842469.1| phosphate ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227363909|ref|ZP_03848013.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683116|ref|ZP_08162632.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
 gi|148531811|gb|ABQ83810.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225472|dbj|BAG25989.1| phosphate ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227071062|gb|EEI09381.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977466|gb|EGC14417.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
          Length = 299

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 25/213 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  ++S +     A + A              L P ++++  IP + +    LT  V +
Sbjct: 84  FSVTLLSGVIALPLALVVAIAITEILPSTAYKFLQPTIELLVGIPSVVYGYVGLTVIVPF 143

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++ G   G  LAA   +F   +  MT     S   +P+     S     + WQ    
Sbjct: 144 LRRIFGGTGFGI-LAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATRWQTISR 202

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--------------GIGSY 228
           + +P +  G++  M+  M+  +   +A +M++   TV+P                GIG+ 
Sbjct: 203 VIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLTTGIGNT 262

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   I    L ++   +L M     L  +L+ R
Sbjct: 263 VMGTISNNALWSLALILLVMSLAFNLLMRLVSR 295



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 94/277 (33%), Gaps = 36/277 (12%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWL--------G 383
           Q  S + +SY+       +V  + I + W+ I  +  NH++  D L  I           
Sbjct: 17  QEASGKVISYLAITLIGGLVATILIFLTWKGIALFTGNHYSLWDFLSGIKWRPSDHVFGA 76

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIG------FRPHISSKIQPFAQLLAAFPANVF--FP 435
              +     + +++ +I +P+ + +               +QP  +LL   P+ V+    
Sbjct: 77  LPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYKFLQPTIELLVGIPSVVYGYVG 136

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFKEVASSFHITG 490
           L V       +       +L      + ++        I    A P  ++  ++    T 
Sbjct: 137 LTVIVPFLRRIFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATR 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR--------------T 536
           W+    +I+P      +T  +     A+  ++  ++       +               T
Sbjct: 197 WQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLT 256

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           TG+G  +  +    +   + L +L+M      L R +
Sbjct: 257 TGIGNTVMGTISNNALWSLALILLVMSLAFNLLMRLV 293


>gi|110597977|ref|ZP_01386258.1| Phosphate transport system permease protein 2 [Chlorobium
           ferrooxidans DSM 13031]
 gi|110340426|gb|EAT58915.1| Phosphate transport system permease protein 2 [Chlorobium
           ferrooxidans DSM 13031]
          Length = 448

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 54/132 (40%), Gaps = 7/132 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       KS     +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGVIAAVYFTEYAKSGFFNSMLRSANSTLAGVPSIVFGMFGLAFFINTLKVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + +A    +    +  +  +  +++  +P+   E S S   + W     + +P ++PG
Sbjct: 293 SKSVIAGSLTLAIMILPTIIRAAEEAILAVPKTYREASLSLGSTKWNTIATVILPAALPG 352

Query: 192 LVWNMMMSMSGG 203
           ++   ++S+   
Sbjct: 353 ILTGGVISLGRA 364



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 14/165 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-------RPHISS 416
            G+I +      +   IW      F + V    A +   P+G+               +S
Sbjct: 203 WGFITDSSVDSHIFGGIWPEIQGTFFLAVG---AMLFAFPLGVIAAVYFTEYAKSGFFNS 259

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            ++     LA  P+ VF        ++ +        +  SL +       I+       
Sbjct: 260 MLRSANSTLAGVPSIVFGMFGLAFFINTLKVSESKSVIAGSLTLAIMILPTIIRAAEEAI 319

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            A P  ++E + S   T W     +ILP   P  +TG + + G A
Sbjct: 320 LAVPKTYREASLSLGSTKWNTIATVILPAALPGILTGGVISLGRA 364


>gi|283785195|ref|YP_003365060.1| ABC transporter membrane protein [Citrobacter rodentium ICC168]
 gi|282948649|emb|CBG88240.1| putative ABC transporter membrane protein [Citrobacter rodentium
           ICC168]
          Length = 236

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    + S+M ++LL       L ++   + +   ++ I ++  ++P L  L  
Sbjct: 39  LLYLGKQHLFLVFSSMFLALLVGIPSGILLSRPAAKGIAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC +P  L E ++   ++ WQ
Sbjct: 99  AMVIIGIG--------DFPAIVALFLASLLPIVRNTYAGLCAVPASLTEAAKGIGMTRWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 151 RLCQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 203

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 204 PTLILGATATALFALILDSLL 224



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 79/227 (34%), Gaps = 14/227 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + I +A    G  ++    + V  +++LG   +F V   + +A ++ IP GI +
Sbjct: 10  AGFTFAIIIVLALVVWGVGIDTLQARQV-DLLYLGKQHLFLVFSSMFLALLVGIPSGILL 68

Query: 409 GF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  I+  +     +    P      L +  +       +    + +   +   I+ 
Sbjct: 69  SRPAAKGIAEYVMQIFNVGNTLPPLAVLALAMVIIGIG----DFPAIVALFLASLLPIVR 124

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  AG  A P    E A    +T W+    + LP  +P  ++G   A       + ++ +
Sbjct: 125 NTYAGLCAVPASLTEAAKGIGMTRWQRLCQVELPNAWPVMLSGIRIATAINVGTAPLAFL 184

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                     +  G  I        FP ++LG      F L L+  L
Sbjct: 185 IG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILDSLL 224


>gi|255971317|ref|ZP_05421903.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T1]
 gi|255973936|ref|ZP_05424522.1| peptide ABC transporter permease [Enterococcus faecalis T2]
 gi|256761621|ref|ZP_05502201.1| ABC transporter [Enterococcus faecalis T3]
 gi|255962335|gb|EET94811.1| glycine betaine/carnitine/choline ABC transporter [Enterococcus
           faecalis T1]
 gi|255966808|gb|EET97430.1| peptide ABC transporter permease [Enterococcus faecalis T2]
 gi|256682872|gb|EEU22567.1| ABC transporter [Enterococcus faecalis T3]
 gi|323480045|gb|ADX79484.1| glycine betaine/carnitine/choline transport system permease protein
           OpuD [Enterococcus faecalis 62]
          Length = 217

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 67/180 (37%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++ + +       + ++ R L   ++ + +I+Q++P L  L+  ++    
Sbjct: 23  LRHFLISIYGVIFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAMLSILMLGMGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        +  +F   +  +  + Y  +  + R++ +V +   ++  Q  + + +
Sbjct: 83  GV--------NTVVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQLLYMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       D  +I+   
Sbjct: 135 PLSVSVIMAGIR-------NALVVAIGITAIGAFVGAGGLGDIIIRGTNATDGASIILVG 187



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  YV           +  +I A+I+ IP+GI I  +  +++ I   A ++   PA   
Sbjct: 13  QNGGYVFQQFLRHFLISIYGVIFAAIVGIPIGIMISRKRSLANWIIRLANIIQTVPALAM 72

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++  +          + + +   +   I+ N   G      +  +V     +T  + 
Sbjct: 73  LSILMLGMGLGVNT----VVVTVFLYSLLPIIKNTYTGMIQVDRNILDVGKGMGMTKVQL 128

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP      + G   A   A   + +      G       GLG  I   T      
Sbjct: 129 LYMVELPLSVSVIMAGIRNALVVAIGITAIGAFVGAG-------GLGDIIIRGTNATDGA 181

Query: 554 EVVL 557
            ++L
Sbjct: 182 SIIL 185


>gi|242237497|ref|YP_002985678.1| binding-protein-dependent transporters inner membrane component
           [Dickeya dadantii Ech703]
 gi|242129554|gb|ACS83856.1| binding-protein-dependent transport systems inner membrane
           component [Dickeya dadantii Ech703]
          Length = 362

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 10/234 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASIIW 401
            +  FW  +V   AI          +    +     +      T+ + V+   ++ S + 
Sbjct: 122 WVLYFWQLLVTWFAIPQVLLPTPLDILQALFGSASLLAGDVVQTVLKSVLAGYLLGSGLG 181

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I V + I   P +   + P A L +  P     P+ V    +   +     + +++  T 
Sbjct: 182 IAVAMLIDRLPFLQRGLLPLANLTSTIPLVGVAPIAVMWFGFDWPSK----AAVIVLVTF 237

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  L + +AG  A     +E+   +  +  R    + LP   P+  +        A  ++
Sbjct: 238 FPALVSTLAGLRASGKLERELMYCYAASPRRTLWALRLPAALPFIFSALKVNATLALISA 297

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           IV+E          T GLG  I+    +     V   +++       +   L  
Sbjct: 298 IVAEFFGS-----PTAGLGFRISTEAARMHMSIVWAAIVVASAIGSLVYALLVR 346



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTF 84
           VL    + +    I +  +P  +  +  +      L     +T L+ +L+  ++      
Sbjct: 123 VLYFWQLLVTWFAIPQVLLPTPLDILQALFGSASLLAGDVVQTVLKSVLAGYLLGSGLGI 182

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A L  +   L   L+P+ ++  +IP++G     V++F   +P K           I  
Sbjct: 183 AVAMLIDRLPFLQRGLLPLANLTSTIPLVGVAPIAVMWFGFDWPSKAA--------VIVL 234

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              +    S    L    +   E+   +  S  +  W L +P ++P +   + ++ +   
Sbjct: 235 VTFFPALVSTLAGLRASGKLERELMYCYAASPRRTLWALRLPAALPFIFSALKVNATLAL 294

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              + +E         P  G+G  I+       +  +  A++    +  L   LL R
Sbjct: 295 ISAIVAEFFGS-----PTAGLGFRISTEAARMHMSIVWAAIVVASAIGSLVYALLVR 346


>gi|302388815|ref|YP_003824636.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302199443|gb|ADL07013.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 213

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 15/175 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                  + ++L   ++ I  I+Q+IP L  L F +  F           +L AI A+  
Sbjct: 38  PLGIALTRYKKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIG--------KLPAIIALTL 89

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  + Y  +  +   L +V +   ++  Q  W + +P S+P ++  +  +     
Sbjct: 90  YALLPILRNTYTGILGVDPALIDVGKGMGMTSRQILWMVELPLSLPVIMAGVRTA----- 144

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              V +  +    T I   G+G  I   ++  D   IL   +    +  L+D +L
Sbjct: 145 --TVLTIGVAALATFIGAGGLGDLIDRGLRVADRNLILAGAIPAAILAILFDLIL 197



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI +     ++  I   A ++   P+      ++       L   + L+L  +     
Sbjct: 38  PLGIALTRYKKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIGKLPAIIALTLYALL---- 93

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N   G         +V     +T  +    + LP   P  + G  TA       + 
Sbjct: 94  PILRNTYTGILGVDPALIDVGKGMGMTSRQILWMVELPLSLPVIMAGVRTATVLTIGVAA 153

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           ++     G       GLG  I           ++ G +      +  +  L  
Sbjct: 154 LATFIGAG-------GLGDLIDRGLRVADRNLILAGAIPAAILAILFDLILRK 199


>gi|260173871|ref|ZP_05760283.1| putative ABC transporter permease protein [Bacteroides sp. D2]
 gi|315922134|ref|ZP_07918374.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696009|gb|EFS32844.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 398

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|256046009|ref|ZP_05448881.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563289|ref|ZP_05833775.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
 gi|265992420|ref|ZP_06104977.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|260153305|gb|EEW88397.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
 gi|263003486|gb|EEZ15779.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
          Length = 248

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 17/210 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILD 105
           +    P+  D  +L     +    +  A   S L     A    + +      +   +++
Sbjct: 35  VDTGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVN 94

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I Q+ P +  L  TV  F           +   + A+F   +  +  +    L ++P  +
Sbjct: 95  IGQTFPPVAVLALTVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPI 146

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +R   ++G Q+ + + +P +MP ++  + +S   G         +           +
Sbjct: 147 VEAARGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------L 199

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G  I   +   +L  +L   L +  +  L 
Sbjct: 200 GEVIIAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALTVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|227545025|ref|ZP_03975074.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908161|ref|ZP_07125628.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227184994|gb|EEI65065.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894700|gb|EFK88055.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 299

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 21/212 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  + A+ ++L+     A            L P ++++  IP + +    LT  V + 
Sbjct: 87  TLLSGVIALPLALVVAI--AITEILPSTAYKFLQPTIELLVGIPSVVYGYVGLTVIVPFL 144

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              + G   G  LAA   +F   +  MT     S   +P+     S     + WQ    +
Sbjct: 145 RRFFGGTGFGI-LAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATRWQTISRV 203

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--------------GIGSYI 229
            +P +  G++  M+  M+  +   +A +M++   TV+P                GIG+ +
Sbjct: 204 IIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLTTGIGNTV 263

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              I    L ++   +L M     L  +L+ R
Sbjct: 264 MGTISNNALWSLALILLVMSLAFNLLMRLVSR 295



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 93/277 (33%), Gaps = 36/277 (12%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWL--------G 383
           Q  S + +SY+       +V  + I + W+ I  +  NH++  D L  I           
Sbjct: 17  QEASGKVISYLAITLIGGLVATILIFLTWKGIALFTGNHYSLWDFLSGIKWRPSDHVFGA 76

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIG------FRPHISSKIQPFAQLLAAFPANVF--FP 435
              +     + +++ +I +P+ + +               +QP  +LL   P+ V+    
Sbjct: 77  LPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYKFLQPTIELLVGIPSVVYGYVG 136

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFKEVASSFHITG 490
           L V               +L      + ++        I    A P  ++  ++    T 
Sbjct: 137 LTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNASAGLGATR 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR--------------T 536
           W+    +I+P      +T  +     A+  ++  ++       +               T
Sbjct: 197 WQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMPTGLMHSAATLTSVLT 256

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           TG+G  +  +    +   + L +L+M      L R +
Sbjct: 257 TGIGNTVMGTISNNALWSLALILLVMSLAFNLLMRLV 293


>gi|204928942|ref|ZP_03220085.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204321486|gb|EDZ06685.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 389

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 181 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 240

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +++  +S 
Sbjct: 241 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESAKAMGMSS 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 301 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 353

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 354 AIDLVLLGVIPVIALAVVIDALF 376



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 129 DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 188

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 189 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 246

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 247 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESAKAMGMSSGQRFRH 306

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 307 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 359

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 360 LGVIPVIALAVVIDALF 376


>gi|163735196|ref|ZP_02142632.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
 gi|161391654|gb|EDQ15987.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
          Length = 280

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 85/276 (30%), Gaps = 16/276 (5%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +    W     L+  +    R    +          +        ++ +     V     
Sbjct: 6   LALIVWGLGWWLNIKLSHSPRADTRLFSLLIPVIFGVTIVVMWEILVQMLGISGVILPPP 65

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
                    +  H  + D    I  G +T        ++ +I    V I     P ++  
Sbjct: 66  SAIAARFA-VSTHLLWADFEQTILKGAMT------GYVLGAIAAFAVAILADRSPFLTKG 118

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P    +AA P     P+ V  +     +    + +++ F     IL N +AG      
Sbjct: 119 ILPVGAFMAALPIVGTAPIFVRWLGSDWHSKAAVVGVMVFF----PILVNTVAGLKGSSA 174

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +++  ++    W     + LP   P+   G   A   A   +IV+E          T 
Sbjct: 175 MQRDLMRTYGANYWTTLFKLRLPAAMPFVFNGLKIATTLALIGAIVAEFFGS-----PTV 229

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G+G  I+ S  + +   V   +++      A    +
Sbjct: 230 GMGFRISTSVGQLAMDMVWAEIIVAALAGSAFYGLI 265



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 92/246 (37%), Gaps = 16/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   V+   ++ +L         P  I     ++   H L     +T L+  +
Sbjct: 35  LIPVIFGVTIVVMWEILVQMLGISGVILPPPSAIAARFAVST--HLLWADFEQTILKGAM 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  V+  +  F  A LA +S  L   ++P+   M ++PI+G     V +  + +  K   
Sbjct: 93  TGYVLGAIAAFAVAILADRSPFLTKGILPVGAFMAALPIVGTAPIFVRWLGSDWHSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         +  +    L        ++ R++  + W   + L +P +MP + 
Sbjct: 153 VGVMVFF--------PILVNTVAGLKGSSAMQRDLMRTYGANYWTTLFKLRLPAAMPFVF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P  G+G  I+ ++ +  +  +   ++       
Sbjct: 205 NGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLAMDMVWAEIIVAALAGS 259

Query: 254 LYDQLL 259
            +  L+
Sbjct: 260 AFYGLI 265


>gi|158426022|ref|YP_001527314.1| putative ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
 gi|158332911|dbj|BAF90396.1| putative ABC-type nitrate/sulfonate/bicarbonate transport permease
           [Azorhizobium caulinodans ORS 571]
          Length = 271

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R++  + +++ I + VG+ IG  P + + + PF  +++  P     P++   +  
Sbjct: 76  LATLDRLLTALGLSTAIALVVGVTIGMLPAVRALLAPFVAMVSMVPPLALLPILFIVMGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       L+  G   +++ ++       P +    A +   + W+    ++LP I 
Sbjct: 136 GEASK----VALITIGVTPFLIRDLAMRVEELPREQIIKAETLGASSWQLALRVVLPQIA 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G A+   I +            +GLG  I       +   ++  V  + 
Sbjct: 192 PRLIDALRLSLGPAFLFLIAA------EAIAAESGLGYRIFLVRRYLAMDVILPYVAWIT 245

Query: 564 CFVLALNRFLWH 575
              + ++  L  
Sbjct: 246 LLSVLMDYALVR 257



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 92/271 (33%), Gaps = 24/271 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P   +  +     F L+    ++G    L     +  +P      D +  V  
Sbjct: 1   MRLINRRPDRTAALLLAMLPFVLVLIAYILGSAARLAENPADKLLPSLGTIADAIARVAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
             D  +    L      T  R+L+A+ +S     V          +  +L P + ++  +
Sbjct: 61  NPDARTGDYLLLNDTLATLDRLLTALGLSTAIALVVGVTIGMLPAVRALLAPFVAMVSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    +             E + +  I       +   +   +  +PR+    + 
Sbjct: 121 PPLALLPILFIVMGLG--------EASKVALITIGVTPFLIRDLAMRVEELPREQIIKAE 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S WQ    + +P   P L+  + +S+   + F++        + +    G+G  I 
Sbjct: 173 TLGASSWQLALRVVLPQIAPRLIDALRLSLGPAFLFLI------AAEAIAAESGLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           L  +   +  IL  +  +  +  L D  L R
Sbjct: 227 LVRRYLAMDVILPYVAWITLLSVLMDYALVR 257


>gi|50120843|ref|YP_050010.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49611369|emb|CAG74816.1| ABC transporter, permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 271

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 17/210 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              + +R+   + I+ L + ++   A         L P++ ++  IP L  L    + F 
Sbjct: 75  TQASLIRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPILFIVFG 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     EL+ +  I       +   + Q   NIP+++   +++   + W     + 
Sbjct: 135 LD--------ELSKVMLIVIGVTPMLARDLEQRARNIPQEMLIKAQTLGANSWVVVLRVI 186

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +  L+ ++ + +   W F++++E I          G+G  I L  +   +  IL  
Sbjct: 187 LPQLLSRLLISLRLLLGATWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVILPY 240

Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           ++ +  + +L D   + L R    WS + +
Sbjct: 241 VVWITLLAWLMDMALRWLHRRWFPWSEESK 270



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 76/210 (36%), Gaps = 14/210 (6%)

Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           Y+ WL    ++ R+ + + IAS++ +  GI  G  P   + + P   +L+  P     P+
Sbjct: 69  YLFWLDTQASLIRLALGLGIASLLSLLFGIAAGAFPLFRASLSPLMTVLSMIPPLAILPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +        L+      +L++ G    +  ++   A   P +    A +     W     
Sbjct: 129 LFIVFGLDELSK----VMLIVIGVTPMLARDLEQRARNIPQEMLIKAQTLGANSWVVVLR 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP +    +       G  W   I +E  S       T GLG  I       +   ++
Sbjct: 185 VILPQLLSRLLISLRLLLGATWLFLISAEAIS------ATAGLGYRIFLVRRYLAMDVIL 238

Query: 557 LGVLIMCCFVLALN---RFLWHPLYLYGTR 583
             V+ +      ++   R+L    + +   
Sbjct: 239 PYVVWITLLAWLMDMALRWLHRRWFPWSEE 268


>gi|124009230|ref|ZP_01693911.1| phosphate ABC transporter, permease protein PstC [Microscilla
           marina ATCC 23134]
 gi|123985215|gb|EAY25149.1| phosphate ABC transporter, permease protein PstC [Microscilla
           marina ATCC 23134]
          Length = 397

 Score = 71.1 bits (173), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 78/204 (38%), Gaps = 16/204 (7%)

Query: 79  SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYP 128
           +LLF      +AA       ++++  ++ P ++++  IP + +    L   V +    + 
Sbjct: 186 ALLFAIPTGIIAAIYLVEIANKQVKNIINPFIELLAGIPSVIYGFFGLVVIVPFIQKTFA 245

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    L     +    +  +      ++ ++PR+L+E S +   +  Q  + + VP++
Sbjct: 246 LDMGETALTGSIILGIISLPTIITISEDAIRSVPRELKEASFALGANHLQTIFKVIVPYA 305

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242
           + G+V   ++ +       +A  M+      +       +  I S +A  + E     I 
Sbjct: 306 LSGIVSAAILGVGRTIGETMAVLMVTGNAAQMPSSFLDSVRVITSTVAAELGETAQGGIH 365

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVW 266
           Y  L ML  +          +  W
Sbjct: 366 YRALFMLACVLFILTFWLNLLAEW 389



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 397 ASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVS 442
           A +  IP GI             + + I PF +LLA  P+ ++         P +    +
Sbjct: 186 ALLFAIPTGIIAAIYLVEIANKQVKNIINPFIELLAGIPSVIYGFFGLVVIVPFIQKTFA 245

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  L  S+++   +   I+        + P + KE + +      +    +I+P  
Sbjct: 246 LDMGETALTGSIILGIISLPTIITISEDAIRSVPRELKEASFALGANHLQTIFKVIVPYA 305

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
               V+ AI   G     ++   + +     + ++
Sbjct: 306 LSGIVSAAILGVGRTIGETMAVLMVTGNAAQMPSS 340


>gi|312867635|ref|ZP_07727841.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parasanguinis F0405]
 gi|322389237|ref|ZP_08062798.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC 903]
 gi|311096698|gb|EFQ54936.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parasanguinis F0405]
 gi|321144142|gb|EFX39559.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus parasanguinis ATCC 903]
          Length = 303

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +  +    A    L      ++S L    +A  AA      S +    L P ++++  IP
Sbjct: 68  NPAAKEFGALPMILGSFIVTLLSALLATPFAIGAAVFMTEVSPKGARFLQPAIELLVGIP 127

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +L+ G   G  L+ +F +F   +  +TF    SL  +PR   E
Sbjct: 128 SVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRAVPRHYRE 186

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W++ +  +  G+   ++  M+  +   +A +M+V    V+P 
Sbjct: 187 ASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPT 241



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  ++A+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 74  FGALPMILGSFIVTLLSALLATPFAIGAAVFMTEVSPKGARFLQPAIELLVGIPSVVYGF 133

Query: 434 ------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                  P   S      + +   +++  +MI  T   + F       A P  ++E + +
Sbjct: 134 IGLQVVVPFTRSLFGGTGFGILSGVFVLFVMILPT---VTFMTTDSLRAVPRHYREASMA 190

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+   ++ L        T  +     A+  ++  ++       + T+
Sbjct: 191 MGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVPTS 242


>gi|253572872|ref|ZP_04850270.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837504|gb|EES65597.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 398

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                +   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYEALFLLGVVLFFITLI 381



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAALFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 SMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|157369689|ref|YP_001477678.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157321453|gb|ABV40550.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 386

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +L+ +V +L+       L  +S RL   +   L+I+Q++P +      +    
Sbjct: 179 LLQHLTILLATLVPALVIGIPLGVLCFRSVRLQTPIFSTLNIIQTVPSIALFGLLIAPLA 238

Query: 125 NLYPGKVIGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          AI A+    +  +  S+   L ++P  + E +    L+ 
Sbjct: 239 GLAKALPWLAEHGVSGIGMAPAIVALVLYALLPLVRSVVAGLQSVPASVIESASGMGLTR 298

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  + +P ++P  +  + +         V + +I  G       G G+ +   +   
Sbjct: 299 GQIFLRVQLPLALPLFLTGVRILAVQTVGMAVVAALIGAG-------GFGAIVFQGLLSS 351

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L  ++ ++ +  + D L 
Sbjct: 352 ALDLVLLGVIPVIVMAVIVDSLF 374



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 85/222 (38%), Gaps = 21/222 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +  +  ++  QDV     L  +T+   +  ++ A +I IP+G+       + + I     
Sbjct: 162 LSLLKEYYNRQDVFDAALLQHLTIL--LATLVPALVIGIPLGVLCFRSVRLQTPIFSTLN 219

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWL------------SLLMIFGTQWYILFNVIAG 471
           ++   P+   F L+++ ++                       + ++      ++ +V+AG
Sbjct: 220 IIQTVPSIALFGLLIAPLAGLAKALPWLAEHGVSGIGMAPAIVALVLYALLPLVRSVVAG 279

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             + P    E AS   +T  + +  + LP   P ++TG           ++V+ +   G 
Sbjct: 280 LQSVPASVIESASGMGLTRGQIFLRVQLPLALPLFLTGVRILAVQTVGMAVVAALIGAG- 338

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 G GA + +     +   V+LGV+ +    + ++   
Sbjct: 339 ------GFGAIVFQGLLSSALDLVLLGVIPVIVMAVIVDSLF 374


>gi|293364472|ref|ZP_06611198.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus oralis ATCC
           35037]
 gi|307702765|ref|ZP_07639716.1| ABC transporter, permease protein [Streptococcus oralis ATCC 35037]
 gi|291317318|gb|EFE57745.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus oralis ATCC
           35037]
 gi|307623678|gb|EFO02664.1| ABC transporter, permease protein [Streptococcus oralis ATCC 35037]
          Length = 238

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 14/176 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L  ++  T    L  +V+ +L   + A L      L  ++ P++ ++Q+IP +   
Sbjct: 37  DREFLWHHSWATLRVALLGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIA 96

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++             L  I  I  +  + +  S+     +  +D+  +    R + 
Sbjct: 97  PILVLWLGYGI--------LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANP 148

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           WQ  W+  +P S+P     + +S+S  +   V SE +          G+G Y+  +
Sbjct: 149 WQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 47  ATLRVALLGLVLGVLIACIMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 107 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLP 162

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 163 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|255010351|ref|ZP_05282477.1| putative phosphate-related ABC transport system, membrane protein
           [Bacteroides fragilis 3_1_12]
 gi|313148151|ref|ZP_07810344.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136918|gb|EFR54278.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 398

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    +   ++  + ++   L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLSVSIYMSEVANPKVRGWLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
                  Y  L +LGV+  +  L+          F +E  +      S
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLIIN--------FSVEYISSKGVKRS 397



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+IA    + V I++     P +   ++P  +LL
Sbjct: 160 FPTATPAPLFGFLPLITGTLWVSLFAILIALPFGLSVSIYMSEVANPKVRGWLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|298386614|ref|ZP_06996170.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           1_1_14]
 gi|298260991|gb|EFI03859.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           1_1_14]
          Length = 398

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                +   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYEALFLLGVVLFFITLI 381



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAALFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 SMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|126700835|ref|YP_001089732.1| putative osmoprotectant ABC transporter substrate-binding/permease
           [Clostridium difficile 630]
 gi|115252272|emb|CAJ70113.1| ABC-type transport system, glycine betaine/carnitine/choline
           permease [Clostridium difficile]
          Length = 511

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            ++ + +IP +  L F + +               A+ A+    +  M  + Y  + N+ 
Sbjct: 58  TINFLYTIPSISMLGFLIPFSGIGNT--------TAVIALTIYALLPMVRNTYTGITNVD 109

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +++ E +R    + +Q  + + +  ++P ++  +          V+ +  +    + I  
Sbjct: 110 KNILEAARGMGSTDFQILYKIKLLLALPVIMSGIR-------NMVIMTIALAGIASFIGA 162

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I   I   + +  +   + +  +  ++D +L
Sbjct: 163 GGLGVAIYRGITTNNTIMTITGSILIALLALIFDFIL 199



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 11/152 (7%)

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L   P+      ++      +    + L++  +      ++ N   G +    +  E
Sbjct: 59  INFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALL----PMVRNTYTGITNVDKNILE 114

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     T ++    I L    P  ++G         N  I++   +     +   GLG 
Sbjct: 115 AARGMGSTDFQILYKIKLLLALPVIMSGIR-------NMVIMTIALAGIASFIGAGGLGV 167

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I       +    + G +++    L  +  L
Sbjct: 168 AIYRGITTNNTIMTITGSILIALLALIFDFIL 199


>gi|83944386|ref|ZP_00956840.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
 gi|83844709|gb|EAP82592.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
          Length = 279

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +    P  ++ L +       L   W  +V G+ I         ++       +  +  
Sbjct: 20  RLARLRPARWVSLAAPLVFGATLIAVWEGIVRGLEISQVLLPAPSLIALRLVSSLDILWV 79

Query: 382 LGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               T+ +  +   ++       + + I   P +   + P    +AA P     P++V  
Sbjct: 80  DFVQTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPVIGMAPILVMW 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             +   +    + +++ F     +L N + G  A     +++  ++  + W     + LP
Sbjct: 140 FGFDWQSKAAVVVVMVFF----PMLVNTVQGLQATDAMQRDLMRTYAASYWATLFKLRLP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+   G       A   +IV+E            G+G  I+ S  + +   V   ++
Sbjct: 196 AAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVRGMGFRISTSVGQLALDLVWAEIV 250

Query: 561 IMCCFVLAL 569
           +      A 
Sbjct: 251 VAAIAGSAF 259



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 24/269 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHG-------IQETTVPRDIVDIVPITLDVHSLPQYAS 66
           R+ P  +  LA  LV G   I +         I +  +P   +  + +   +  L     
Sbjct: 23  RLRPARWVSLAAPLVFGATLIAVWEGIVRGLEISQVLLPAPSLIALRLVSSLDILWVDFV 82

Query: 67  RTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T L+  LS  V+     F+ A    +   L   L+P+ + + ++P++G     V++F  
Sbjct: 83  QTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPVIGMAPILVMWFGF 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +  K     +   F         M  +  Q L        ++ R++  S W   + L +
Sbjct: 143 DWQSKAAVVVVMVFF--------PMLVNTVQGLQATDAMQRDLMRTYAASYWATLFKLRL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +  +      + +E         P+ G+G  I+ ++ +  L  +   +
Sbjct: 195 PAAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVRGMGFRISTSVGQLALDLVWAEI 249

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           +        +     L  R +  W    R
Sbjct: 250 VVAAIAGSAFYGAMSLFERRVTFWHPSQR 278


>gi|332686417|ref|YP_004456191.1| phosphate transport system permease PstA [Melissococcus plutonius
           ATCC 35311]
 gi|332370426|dbj|BAK21382.1| phosphate transport system permease protein PstC (TC 3.A.1.7.1)
           [Melissococcus plutonius ATCC 35311]
          Length = 305

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 75/168 (44%), Gaps = 11/168 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +      ++S LF   +A  AA        +R   +L P+++++  IP + +   
Sbjct: 81  ALPMIVGSFIVTLLSALFATPFAIGAAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFI 140

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V    +++ G   G  LA  F +F   +  +T     +L ++PR   E S +   
Sbjct: 141 GLSVVVPLVRSVFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKSVPRHYREASLALGA 199

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++     +P 
Sbjct: 200 TRWQTIYKIVLRAAIPGVLTAIIFGMARAFGEALAIQMVIGNAADMPT 247



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQ 461
              +  +QP  +LL   P+ V+         PLV S      + +    ++  +MI  T 
Sbjct: 116 KRGAKILQPVIELLVGIPSVVYGFIGLSVVVPLVRSVFGGTGFGILAGTFVLFVMILPT- 174

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +    +    + P  ++E + +   T W+    I+L    P  +T  I     A+  +
Sbjct: 175 --VTTMTVDALKSVPRHYREASLALGATRWQTIYKIVLRAAIPGVLTAIIFGMARAFGEA 232

Query: 522 IVSEVASWGHIHLRTT 537
           +  ++       + T+
Sbjct: 233 LAIQMVIGNAADMPTS 248


>gi|331091017|ref|ZP_08339859.1| hypothetical protein HMPREF9477_00502 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405239|gb|EGG84775.1| hypothetical protein HMPREF9477_00502 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 265

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     IT++  +   +      I + I +     +S   +P+  +L + P +   PL+
Sbjct: 69  SIFSHIGITLYETIFSFLFVIFFSILIAILLWSSQKLSDITEPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+   +  N +        +  ++  + H   +     +
Sbjct: 129 IVWLGANPTTIIVCGMSIAIFGSILNLYTNFV----HVDEEEIKLIYTLHGNRFHVLTKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  +       G      ++ E  +        +GLG  I  S++      +++
Sbjct: 185 VLPSSVPAIMNMMKVNIGLCLVGVVIGEFLA------AKSGLGYLIIYSSQVFKMDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L  F+
Sbjct: 239 SIVLLCIMAMVLYTFI 254



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + +  + F+ + A L   S++L  +  P L ++ S+P        +V+ 
Sbjct: 73  HIGITLYETIFSFLFVIFFSILIAILLWSSQKLSDITEPYLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y +  ++  +  ++  +   + +     +
Sbjct: 133 GANPTTIIVCGMSIAIFGSI--------LNLYTNFVHVDEEEIKLIYTLHGNRFHVLTKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++  M +++      VV  E +          G+G  I  + +   +  +L 
Sbjct: 185 VLPSSVPAIMNMMKVNIGLCLVGVVIGEFLAAKS------GLGYLIIYSSQVFKMDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +  +    +
Sbjct: 239 SIVLLCIMAMVLYTFI 254


>gi|297243624|ref|ZP_06927555.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis AMD]
 gi|296888375|gb|EFH27116.1| ABC-type nitrate/sulfonate/bicarbonate transporter, permease
           component [Gardnerella vaginalis AMD]
          Length = 136

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 6/116 (5%)

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+  G    +  N+  G         E+A  +H+     +  I+L G  P ++TG   
Sbjct: 3   IALIAVGVFGPMYVNIRDGVRNIDPKLLELAQVYHVKKSTIFISILLRGTLPSFMTGLRF 62

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           A   AW A +  E  +       + G+G  ++ + E     +++  V++     L 
Sbjct: 63  AISVAWVALVTCETVN------SSIGIGYILSRAQEFFRPDQMMACVIMYAIAGLG 112



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 42/115 (36%), Gaps = 6/115 (5%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I       M  ++   + NI   L E+++ + +     F  + +  ++P  +  +  
Sbjct: 3   IALIAVGVFGPMYVNIRDGVRNIDPKLLELAQVYHVKKSTIFISILLRGTLPSFMTGLRF 62

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           ++S  W  +V  E +          GIG  ++ A +      ++  ++       
Sbjct: 63  AISVAWVALVTCETVNSSI------GIGYILSRAQEFFRPDQMMACVIMYAIAGL 111


>gi|302382331|ref|YP_003818154.1| binding-protein-dependent transporters inner membrane component
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302192959|gb|ADL00531.1| binding-protein-dependent transport systems inner membrane
           component [Brevundimonas subvibrioides ATCC 15264]
          Length = 253

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 6/162 (3%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A++T      A++++++     A   + S      + P+   +Q  P++      +
Sbjct: 52  LAGSAAQTFWMAFKALMVAVVLGGGLAVAVSLSSTAERAVAPLAVTLQVTPVVAIAPLVL 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++    +  + + A  AA         + +   +   L +   DLE +      S  Q+ 
Sbjct: 112 IWAGLDHADRAVTALAAA------VAFFPVFSGVLTGLKSADPDLERLFDLHGASALQRL 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           W L +P ++P ++  + ++        V +E +        L
Sbjct: 166 WRLRLPSALPFMLEGIRVAAGLSIVGAVVAEFVSGSGATQGL 207



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 5/176 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T +     +++A ++   + + +         + P A  L   P     PLV+
Sbjct: 52  LAGSAAQTFWMAFKALMVAVVLGGGLAVAVSLSSTAERAVAPLAVTLQVTPVVAIAPLVL 111

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 H +  +      +    + +   V+ G  +   D + +      +  +    + 
Sbjct: 112 IWAGLDHADRAVTALAAAV--AFFPVFSGVLTGLKSADPDLERLFDLHGASALQRLWRLR 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           LP   P+ + G   A G +   ++V+E  S       T GL   + E+  +   P+
Sbjct: 170 LPSALPFMLEGIRVAAGLSIVGAVVAEFVSGSG---ATQGLAWRLLEAGNRLRTPD 222


>gi|332754760|gb|EGJ85125.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri 4343-70]
 gi|333002075|gb|EGK21641.1| inner membrane ABC transporter permease protein yehY [Shigella
           flexneri K-218]
          Length = 385

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            ++    +  A++ +L+           S      +  +L+++Q++P +      +    
Sbjct: 177 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L        +L         A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 237 ALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++   + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 AQRFLHVQLPLALLVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 350 AIDLVLLGVIPVIVLAVLTDALF 372



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 92/272 (33%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           +       +      +   ++ ++    ++L +    +   +        +  +  +   
Sbjct: 110 RGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANR 169

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QDV        +T+      ++ A +I +P+GIW  F       I     ++   P+   
Sbjct: 170 QDVFDDALAQHLTLL--FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVAL 227

Query: 434 FPLVVSCVSYYHLNPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + ++      ++  V+ G +  P D  E
Sbjct: 228 FGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLE 287

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  ++G + + ++ LP     ++             ++++ +   G       G GA
Sbjct: 288 SARAMGMSGAQRFLHVQLPLALLVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGA 340

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    +  +   
Sbjct: 341 LVFQGLLSSAIDLVLLGVIPVIVLAVLTDALF 372


>gi|328955436|ref|YP_004372769.1| ABC transporter related protein [Coriobacterium glomerans PW2]
 gi|328455760|gb|AEB06954.1| ABC transporter related protein [Coriobacterium glomerans PW2]
          Length = 475

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 81/247 (32%), Gaps = 30/247 (12%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-- 401
           LD         V   + WQ   +++       +L   +   + + R++      SII   
Sbjct: 24  LDSLGEGTWAIVLWLLVWQLASFLIGSSL---ILAGPFQVLVALLRLLPTAAFWSIIASS 80

Query: 402 ---IPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
              I  G  IG                +   +QP   +    P      +VV  + +   
Sbjct: 81  GARILTGCLIGYLVALTLAALAYRAHTVRELLQPAMSVAKGTPIVCV--IVVLLIWFGSE 138

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           + +     L++      I F+V+ G        +E+   F I G +     + PG+ PY 
Sbjct: 139 SVSSISVFLLVLPA---IYFSVLEGLDRLDPAMRELFFVFRIRGLQRQLAYVWPGVLPYL 195

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V  + TA   +W A I +E+            +G  I +S      P++      +    
Sbjct: 196 VATSETAISMSWKAGIAAELIGVPAGT-----IGERIYQSKILLETPDLFAWTAAVVLMA 250

Query: 567 LALNRFL 573
            A  R  
Sbjct: 251 WACERAF 257



 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 87/202 (43%), Gaps = 9/202 (4%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           + ++ ++LV  + + L+        P  ++  +   L   +     + +  R+L+  +I 
Sbjct: 32  WAIVLWLLVWQLASFLIGSSLILAGPFQVLVALLRLLPTAAFWSIIASSGARILTGCLIG 91

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            L     A LA ++  +  +L P + + +  PI+  +   +++F         G+E  + 
Sbjct: 92  YLVALTLAALAYRAHTVRELLQPAMSVAKGTPIVCVIVVLLIWF---------GSESVSS 142

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            ++F   +  + FS+ + L  +   + E+   FR+ G Q+      P  +P LV     +
Sbjct: 143 ISVFLLVLPAIYFSVLEGLDRLDPAMRELFFVFRIRGLQRQLAYVWPGVLPYLVATSETA 202

Query: 200 MSGGWFFVVASEMIVVGDTVIP 221
           +S  W   +A+E+I V    I 
Sbjct: 203 ISMSWKAGIAAELIGVPAGTIG 224


>gi|160882649|ref|ZP_02063652.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483]
 gi|156111964|gb|EDO13709.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483]
          Length = 398

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++  + ++   L PI++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYISEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L    V  + LA  F +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLCNLPVGESGLAGSFVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I+I     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLITGTLWVSLFAILFALPFGLSVSIYISEVANPKVRNWLKPIIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S ++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLCNLPVGESGLAGSFVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|45440779|ref|NP_992318.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Microtus str. 91001]
 gi|45435637|gb|AAS61195.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 378

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 20/251 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    L   +L++ II +L  G  +               D         R    +L+ +
Sbjct: 128 PVWRSLAIALLMLPIIALLASGQLDQLSLMKEYVNRRDVFDDA-----LWRHIQILLTTL 182

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V +++       L   S RL   +   L+I+Q+IP +      +     L       AEL
Sbjct: 183 VPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIPWLAEL 242

Query: 137 A--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                    AI A+    +  +  ++   L  +P  + E ++   ++  Q F+ + +P +
Sbjct: 243 GIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRVQMPIA 302

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP ++  + +         V + +I  G       G+G+ +   +    L  +L  ++ +
Sbjct: 303 MPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLLGVIPV 355

Query: 249 LGVIFLYDQLL 259
           + +  + D L 
Sbjct: 356 IAMAVIVDSLF 366



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 19/196 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++  ++ A +I IP+G+       +   I     ++   P+   F L+++ +S       
Sbjct: 178 LLTTLVPAVVIGIPLGLLCFHSHRLQGAIFSTLNIIQTIPSIALFGLLIAPLSGLAAAIP 237

Query: 450 LWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                           + ++      ++ NV+AG  A P+   E A    +T  + +  +
Sbjct: 238 WLAELGIGGIGLAPAIIALVLYALLPLVRNVVAGLEAVPDSVVESAKGMGMTRQQLFFRV 297

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P   P  ++G           ++V+ +   G       GLGA + +     +   V+L
Sbjct: 298 QMPIAMPLILSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 350

Query: 558 GVLIMCCFVLALNRFL 573
           GV+ +    + ++   
Sbjct: 351 GVIPVIAMAVIVDSLF 366


>gi|83643070|ref|YP_431505.1| proline/glycine betaine ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83631113|gb|ABC27080.1| ABC-type proline/glycine betaine transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 373

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +  +M+ S L     A  A +S +    L  +L ++Q+IP L      +    
Sbjct: 167 MGAHFSLVFWSMLPSALMGMALAIWATRSEKARRGLFGVLSVLQTIPSLALFGLLIAPLS 226

Query: 125 NLY--------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L          G        A+ A+    +  MT + Y +L   P  + E +R   +S 
Sbjct: 227 YLANEFEWLRAIGVQGIGFTPALIALIGYSLLPMTRNAYVALTGTPEPVLEAARGMGMSE 286

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  + +P + P ++  + +         V +  +     +I   G+G++I   + + 
Sbjct: 287 SQVFLQVRLPLAAPVILEGLRI-------MTVQTIGLTAVAALIGAGGMGTFIFQGLGQA 339

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L   +  +      D L 
Sbjct: 340 AMDLVLLGAIPTILFALTADALF 362



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 20/304 (6%)

Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344
           ++ L   T  +  +   +  F    +    +  R      F     F+ L   +    + 
Sbjct: 62  LVMLLTATTVIALLPVMAGVFGLERAAEGLRHGRAALGGGFWLAGFFMALIVVEACHKLQ 121

Query: 345 DIFWFCVVCGVAIGIAWQSIGY--IVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397
              W  +   + +G A     +   +   +     +V     +T        V   ++ +
Sbjct: 122 AGVWLKLASVIVVGGAIAIAYHYGALEKLSLAQEFHVRQRQFVTEMGAHFSLVFWSMLPS 181

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ + + IW          +     +L   P+   F L+++ +SY         ++ + 
Sbjct: 182 ALMGMALAIWATRSEKARRGLFGVLSVLQTIPSLALFGLLIAPLSYLANEFEWLRAIGVQ 241

Query: 458 FGTQWYILF------------NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  L             N     +  P    E A    ++  + +  + LP   P 
Sbjct: 242 GIGFTPALIALIGYSLLPMTRNAYVALTGTPEPVLEAARGMGMSESQVFLQVRLPLAAPV 301

Query: 506 YVTGAIT-ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            + G            ++ + + + G       GLG    +    G+ P ++  +     
Sbjct: 302 ILEGLRIMTVQTIGLTAVAALIGAGGMGTFIFQGLGQAAMDLVLLGAIPTILFALTADAL 361

Query: 565 FVLA 568
           F   
Sbjct: 362 FAFL 365


>gi|307299505|ref|ZP_07579305.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914904|gb|EFN45291.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 247

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 88/244 (36%), Gaps = 21/244 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L   L+  I+ I    + E  +     +   +     +L +  +     +L +  ++
Sbjct: 11  WIFLGIFLLAFILLISNMALWENFLGWLFPEEREVLHPRGTLLELVAEHMWMVLVSSGLA 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +       L   +R +G   +P++  +    Q+ P +  L   V      +        
Sbjct: 71  TIIGISIGVLV--TRPMGRQYLPLVSNLSSLGQTFPPVAVLALAVPLLGFGF-------- 120

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              + A+    +  +  +    + NIP D+ E +    +S WQ  + +  P ++  ++  
Sbjct: 121 KPTVAALLLYGLLPIVRNTIAGIENIPPDVREAAYGMGMSSWQALFKVEFPLALKVIMSG 180

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S+      V+      VG   I   G+GS I   +  ++   +L   +    + F  
Sbjct: 181 IRISV------VINIGTATVG-ATIGAGGLGSPIIAGLVAENPAFVLEGAIPAALLAFSV 233

Query: 256 DQLL 259
           D  L
Sbjct: 234 DAFL 237



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 82/235 (34%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  + +  ++  +A+   +    +            ++ L    M+ V+V   +A+II I
Sbjct: 16  IFLLAFILLISNMALWENFLGWLFPEEREVLHPRGTLLELVAEHMWMVLVSSGLATIIGI 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            +G+ +     +  +  P    L++    FP      L V  + +        L L  + 
Sbjct: 76  SIGVLV--TRPMGRQYLPLVSNLSSLGQTFPPVAVLALAVPLLGFGFKPTVAALLLYGLL 133

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I+ N IAG    P D +E A    ++ W+    +  P      ++G   +     
Sbjct: 134 ----PIVRNTIAGIENIPPDVREAAYGMGMSSWQALFKVEFPLALKVIMSGIRISVVINI 189

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + V      G       GLG+ I       +   V+ G +       +++ FL
Sbjct: 190 GTATVGATIGAG-------GLGSPIIAGLVAENPAFVLEGAIPAALLAFSVDAFL 237


>gi|163758620|ref|ZP_02165707.1| putative permease abc transporter protein [Hoeflea phototrophica
           DFL-43]
 gi|162283910|gb|EDQ34194.1| putative permease abc transporter protein [Hoeflea phototrophica
           DFL-43]
          Length = 295

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 77/204 (37%), Gaps = 9/204 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  ++  T    L    +  +     A      + L   L+P +   Q+IPIL  
Sbjct: 85  TSKRSLIYHSWITLSSTLLGFAMGTVLGVALAVGIVHFQTLDRSLMPWIITSQTIPILAI 144

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++     +++  F    + +   M + L +      ++ R++  S
Sbjct: 145 APMIIVVLNAVGISGLLPKATISMYLSF----FPIAVGMTKGLRSPEVMHLDLMRTYSAS 200

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P ++P LV +M +++S      +  E+         + G+G+ +      
Sbjct: 201 ASQTFWKLRLPAAVPFLVTSMKVAISIALVGAIVGEL-----PTGAVAGLGARLLAGSYY 255

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
              + I  A+L    +  +   L+
Sbjct: 256 GQTVQIWSALLMAAALAGILVSLV 279



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   IT+   ++   + +++ + + + I     +   + P+       P     P++
Sbjct: 89  SLIYHSWITLSSTLLGFAMGTVLGVALAVGIVHFQTLDRSLMPWIITSQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  + + ++ + + I   +  G  +      ++  ++  +  + +  +
Sbjct: 149 IVVLNAVGISGLLPKATISMYLSFFPIAVGMTKGLRSPEVMHLDLMRTYSASASQTFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   P+ VT    A   A   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RLPAAVPFLVTSMKVAISIALVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 262


>gi|322377944|ref|ZP_08052432.1| ABC transporter, permease protein [Streptococcus sp. M334]
 gi|321281120|gb|EFX58132.1| ABC transporter, permease protein [Streptococcus sp. M334]
          Length = 252

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P  +  +     D   L  ++  T    L
Sbjct: 9   RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPLEILQSFVRDREFLWHHSWATLRVAL 67

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 68  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 122 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 179

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 180 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 212



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 80  MAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 135

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 136 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 195

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 196 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 223


>gi|301320710|gb|ADK69353.1| phosphate ABC transporter, permease protein PstA [Mycoplasma
           mycoides subsp. mycoides SC str. Gladysdale]
          Length = 683

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 83/596 (13%), Positives = 196/596 (32%), Gaps = 75/596 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF LLA V+++G + I  + +       + V     + D     +      T + +  +M
Sbjct: 22  IFVLLALVILLGFVMIKTNVLFNKQSFFEFVFGKNWSPDSKEFGILTITLMTLILIFISM 81

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    V + I+ ++  IP + F  F    +     L     
Sbjct: 82  LIAVPLTIFTSFFISEYLTLKSQKVTITIIKLLAGIPSVVFGLFAREQIGALFKLMGASS 141

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 142 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPFIYRDASLALGISKEKTTFNIIRKSATPK 201

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ M+      +A  MI        DT   + G            IG  +     
Sbjct: 202 IISAVILGMARVIGEAMAIMMIAGNSTAWFDTNNGVSGFLFSSIRTLSSTIGLEMLENSS 261

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+                          L++  K + 
Sbjct: 262 NLHESALYAIGMFLFILVFIINLLI--------------------------LFVSNKNSI 295

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--V 352
            + I    +           KL +   + +        +L      + ML + W  +  V
Sbjct: 296 SQKIHLVLFKNKKTHKIKHIKLYQKQTLYQIITNRAENKLFKKIYSTIMLVLMWLSISFV 355

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVI---WLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 I + +I   ++   Y +    I         +   ++LI+   +  IP+ +   
Sbjct: 356 IMFTFWIVFTTIFNGLSSLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFAIPLALACA 415

Query: 410 F--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGT 460
                      + +   +    L A+ P+ +F    +S    Y  L  +++ + + +   
Sbjct: 416 IYLSEFANKNSYFAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASITMTIV 475

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG---- 515
              +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A      
Sbjct: 476 VLPMLIKNFEDALTSVPLSYREAAVALGLSKTKTLFKIVLPNALQAIITGTILAMARIIG 535

Query: 516 -GAWNASIVSEVASWGHIHLRTTGLG-----AYIAESTEKGSFPEVVLGVLIMCCF 565
             A     +     +      ++G         IA  +  G   ++   + ++   
Sbjct: 536 ESAPIYLTLGTAIKYPDRGFLSSGSTLTTGIYKIASESAPGQGNDIAWLMSLITII 591


>gi|146311575|ref|YP_001176649.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145318451|gb|ABP60598.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 215

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 80/205 (39%), Gaps = 10/205 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++ I  I+ +IP +   
Sbjct: 10  NWGFLLTLTFQHLWLVGLAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D+  ++     +  +  + D LL R
Sbjct: 180 DIRMLIAGAFMICLLAIVLDWLLHR 204



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  +++ L    ++ V + + +A II +P+GI I     +++ +   A ++   P
Sbjct: 5   HYMLDNWGFLLTLTFQHLWLVGLAVGLAIIIGVPLGILIVRHKWLATPVLGIATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G  ++C   + L+  L  
Sbjct: 178 GSDIRMLIAGAFMICLLAIVLDWLLHR 204


>gi|325293740|ref|YP_004279604.1| nitrate ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325061593|gb|ADY65284.1| nitrate ABC transporter, membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 290

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 88/275 (32%), Gaps = 14/275 (5%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
            F   +   +        ++R  F     +  S   V  +  +    +  GV  G +   
Sbjct: 6   WFIGAILFWLAAWASNEWLVRHTFASQSAKRMSRMAVPLLFGLAILALWEGVVRGFSVPP 65

Query: 364 IGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           I           +L  + +         +  V+   ++   +   V I I   P +   +
Sbjct: 66  ILLPAPSAILARLLGSLPILWADFRQTFLKSVLTGYVLGCGLGFLVAILIDRSPFLQRGL 125

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P    ++A P     P++V    +   +       +++  T + +L N + G +A  + 
Sbjct: 126 LPIGNFVSALPVVGIAPIMVMWFGFDWQSK----VAVVVIMTFFPMLVNTVQGLAASSHM 181

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +++  ++     +    + LP  +P+           A   +IV+E      +     G
Sbjct: 182 ERDLMRTYAAGWGQTLLKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIV-----G 236

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G  I+    + +   V   + +           +
Sbjct: 237 MGFRISAEMGRSNVDMVWAEIAVAALAGSGFYGLV 271



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 101/271 (37%), Gaps = 21/271 (7%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            +SR   P +F L    L  G++            P  I+  +  +L +  L     +T 
Sbjct: 36  RMSRMAVPLLFGLAILALWEGVVRGFSVPPILLPAPSAILARLLGSLPI--LWADFRQTF 93

Query: 70  LR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           L+ +L+  V+     F+ A L  +S  L   L+PI + + ++P++G     V++F   + 
Sbjct: 94  LKSVLTGYVLGCGLGFLVAILIDRSPFLQRGLLPIGNFVSALPVVGIAPIMVMWFGFDWQ 153

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K        +  +     + M  +  Q L        ++ R++     Q    L +P +
Sbjct: 154 SK--------VAVVVIMTFFPMLVNTVQGLAASSHMERDLMRTYAAGWGQTLLKLRLPAA 205

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD----LLAILYA 244
            P +   + ++ +      + +E         P+ G+G  I+  +   +       I  A
Sbjct: 206 WPFIFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISAEMGRSNVDMVWAEIAVA 260

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
            L   G   L   L+ R +  W    R  RT
Sbjct: 261 ALAGSGFYGLVA-LIERAVTFWHPSVRGGRT 290


>gi|299821177|ref|ZP_07053065.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Listeria grayi DSM 20601]
 gi|299816842|gb|EFI84078.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Listeria grayi DSM 20601]
          Length = 255

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NV 468
               +++  QP   ++   P   F   V++ V   HL       +++ F   + +++ N+
Sbjct: 81  TSAWLTALFQPLVSMMKVTPVASFTMFVLAFVQSSHLP------MIVAFLMVFPVIYGNM 134

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G         E+A  F  + W+  R I  P ++P++     T  G AW A I +EV  
Sbjct: 135 QKGLQNVDPALLEMAGIFEFSHWQRLRTIYFPAVYPFFYAAFQTGIGYAWKAGITAEVLV 194

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
              +      +G  IA++       ++     ++    + + +
Sbjct: 195 SPLLS-----IGKNIADAKVYFDTLQLFAWTTVIIAVSIGVEK 232



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 14/159 (8%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S  L  +  P++ +M+  P+  F  F + +  + +   ++          F      +  
Sbjct: 82  SAWLTALFQPLVSMMKVTPVASFTMFVLAFVQSSHLPMIVA---------FLMVFPVIYG 132

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +M + L N+   L E++  F  S WQ+   +  P   P         +   W   + +E+
Sbjct: 133 NMQKGLQNVDPALLEMAGIFEFSHWQRLRTIYFPAVYPFFYAAFQTGIGYAWKAGITAEV 192

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V      PL  IG  IA A    D L +      ++ V
Sbjct: 193 LVS-----PLLSIGKNIADAKVYFDTLQLFAWTTVIIAV 226


>gi|330685204|gb|EGG96867.1| choline transport system permease protein opuBB [Staphylococcus
           epidermidis VCU121]
          Length = 211

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L +++ +   V++ I  ++Q+IP L  L   +  F           +  AI 
Sbjct: 32  VVAVPVGILLSRTTKTANVVLTIAGVLQTIPTLAVLAIMIPIFGVG--------KTPAIV 83

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F   +  +  +    + NI +++ +  +S  ++ +Q    + +P ++P ++  + +S 
Sbjct: 84  ALFIYVLLPILNNTVLGVKNIDKNVIQAGQSMGMTQFQLMKDVQMPLALPMIISGIRLSS 143

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +   +  +  G       G+G  +   +       I+ A + +  +  + D LL
Sbjct: 144 VYIISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLALIVDFLL 195



 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
            +  ++ ++IA ++ +PVGI +      ++ +   A +L   P      +++        
Sbjct: 20  FYISIIALLIAIVVAVPVGILLSRTTKTANVVLTIAGVLQTIPTLAVLAIMIPIFGVGKT 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L + ++      IL N + G      +  +   S  +T ++  + + +P   P  
Sbjct: 80  PAIVALFIYVLL----PILNNTVLGVKNIDKNVIQAGQSMGMTQFQLMKDVQMPLALPMI 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   +     + + ++     G       GLG  +         P ++   +++    
Sbjct: 136 ISGIRLSSVYIISWATLASYVGAG-------GLGDLVFNGLNLYQPPMIISAAILVTLLA 188

Query: 567 LALNRFL 573
           L ++  L
Sbjct: 189 LIVDFLL 195


>gi|289628338|ref|ZP_06461292.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650136|ref|ZP_06481479.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488813|ref|ZP_07006840.1| Glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156654|gb|EFH97747.1| Glycine betaine/carnitine/choline ABC transporter, permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330869014|gb|EGH03723.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 237

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +VI ++ +L+H           + I  I      L  Y     + +L +M+ +L
Sbjct: 8   GLLGGAVVIALLALLIH----------WIGISTIKQYQDDLLFYLQAHLILVLVSMLAAL 57

Query: 81  LFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +         ++   +G     + I +I  ++P L  L   +                 A
Sbjct: 58  VVGIPAGIALSRPSMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGP--------A 109

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F + +  +  + Y+ L N+   L+E +    ++  Q  W + +P ++P ++  + +
Sbjct: 110 IFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRV 169

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +++       A    ++G        +GS I   I   +
Sbjct: 170 ALAI--NVGTAPLAFLIGANS-----LGSLIFPGIALNN 201



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 8/170 (4%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   V I +    I +I      Q    +++     +  V+V ++ A ++ IP GI + 
Sbjct: 9   LLGGAVVIALLALLIHWIGISTIKQYQDDLLFYLQAHLILVLVSMLAALVVGIPAGIALS 68

Query: 410 ---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                      +Q    +    P      + +  +              +   +   I+ 
Sbjct: 69  RPSMVGRAERFMQ-IFNIGNTVPPLAVLAIALGILGIGSG----PAIFALFLASLLPIVR 123

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           N   G        KE A    +T  +    + LP   P  + G   A   
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLWRVELPNAVPIIIGGVRVALAI 173


>gi|319744188|gb|EFV96556.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Streptococcus
           agalactiae ATCC 13813]
          Length = 216

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + +      L  +  ++++ +         A+  ++   ++ I +++Q+IP L  +
Sbjct: 17  NRSYILEQFIHHFLISIYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMI 76

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +  ++                 +  +F   +  +  + Y  + N+  DL + ++   ++ 
Sbjct: 77  SIIMLGLGLGI--------KTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTK 128

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+ + + +P S+  ++  +          +V +  I      +   G+G  I       
Sbjct: 129 RQRLFMVELPLSISVIMAGLR-------NALVVAIGITAIGAFVGGGGLGDIIIRGTNAT 181

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
           +  AI+ A      ++ ++  L+ 
Sbjct: 182 NGGAIILAGSLPTALMAIFSDLIL 205



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 4/141 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               +  +I+A+I+ IP+GI+I  R  I + +   A ++   P+     +++  +     
Sbjct: 29  FLISIYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLG-- 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   I+ N   G     +D  + A    +T  +    + LP      
Sbjct: 87  --IKTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVI 144

Query: 507 VTGAITACGGAWNASIVSEVA 527
           + G   A   A   + +    
Sbjct: 145 MAGLRNALVVAIGITAIGAFV 165


>gi|225851749|ref|YP_002731982.1| binding-protein-dependent transport systems inner membrane protein
           [Brucella melitensis ATCC 23457]
 gi|256112722|ref|ZP_05453643.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256264737|ref|ZP_05467269.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9]
 gi|265994163|ref|ZP_06106720.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|225640114|gb|ACO00028.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|262765144|gb|EEZ11065.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263095147|gb|EEZ18816.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9]
 gi|326408244|gb|ADZ65309.1| binding-protein-dependent transport systems inner membrane protein
           [Brucella melitensis M28]
 gi|326537959|gb|ADZ86174.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 248

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 73/210 (34%), Gaps = 17/210 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILD 105
           +    P+  D  +L     +    +  A   S L     A    + +      +   +++
Sbjct: 35  VDTGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVN 94

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I Q+ P +  L   V  F           +   + A+F   +  +  +    L ++P  +
Sbjct: 95  IGQTFPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPI 146

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +R   ++G Q+ + + +P +MP ++  + +S   G         +           +
Sbjct: 147 VEAARGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------L 199

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G  I   +   +L  +L   L +  +  L 
Sbjct: 200 GEVIIAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|293192168|ref|ZP_06609380.1| ABC transporter, ATP-binding protein [Actinomyces odontolyticus
           F0309]
 gi|292820364|gb|EFF79356.1| ABC transporter, ATP-binding protein [Actinomyces odontolyticus
           F0309]
          Length = 506

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 77/224 (34%), Gaps = 14/224 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
             G+ +  +P     +        SL   A  T +  ++ M+  +      A   +   R
Sbjct: 9   ASGLSQRILPAPTTILASAAASWPSLSAAAWATGVEGIAGMIAGIAVGIAIAFTTSLWPR 68

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  V +PIL + Q++P++      V++       K        I  +     + +  ++ 
Sbjct: 69  LTHVAMPILVVSQTVPLVAVAPLMVIWMGFTMASK--------IVVVAVFTAFPVALALL 120

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L  +P  L +       S      +  +P++   L   + ++ +  +     +E +  
Sbjct: 121 RGLGRVPTSLTDPMGVAGASRIWILLHARLPWAHTHLFSGIRIAATYAFASAATAEFMG- 179

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                   G+G ++  A        +     T++ +  +   ++
Sbjct: 180 -----AKRGLGVFLLSAQSSFRTDLVFAGAGTLVVMTIILYAIV 218



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 10/194 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      T    +  +I    + I +       P ++    P   +    P     P
Sbjct: 31  WPSLSAAAWATGVEGIAGMIAGIAVGIAIAFTTSLWPRLTHVAMPILVVSQTVPLVAVAP 90

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  + +   +  + +++     T + +   ++ G    P    +       +      
Sbjct: 91  LMVIWMGFTMASKIVVVAVF----TAFPVALALLRGLGRVPTSLTDPMGVAGASRIWILL 146

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +  LP    +  +G   A   A+ ++  +E            GLG ++  +        V
Sbjct: 147 HARLPWAHTHLFSGIRIAATYAFASAATAEFMG------AKRGLGVFLLSAQSSFRTDLV 200

Query: 556 VLGVLIMCCFVLAL 569
             G   +    + L
Sbjct: 201 FAGAGTLVVMTIIL 214


>gi|254718431|ref|ZP_05180242.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. 83/13]
 gi|265983396|ref|ZP_06096131.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306838857|ref|ZP_07471687.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
 gi|264661988|gb|EEZ32249.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|306406055|gb|EFM62304.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
          Length = 248

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQS 109
            P+  D  +L     +    +  A   S L     A    + +      +   +++I Q+
Sbjct: 39  TPVIYDRANLMTLTLQHLGLVALATFCSTLIAVAMAIFVTRRQGAEFLPLSRSLVNIGQT 98

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P +  L   V  F           +   + A+F   +  +  +    L ++P  + E +
Sbjct: 99  FPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAA 150

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++G Q+ + + +P +MP ++  + +S   G         +           +G  I
Sbjct: 151 RGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVI 203

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
              +   +L  +L   L +  +  L 
Sbjct: 204 IAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVAMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|184152831|ref|YP_001841172.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
 gi|183224175|dbj|BAG24692.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
          Length = 216

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I+ II +P+G        ++     FAQLL   P+     L++  +    +   +
Sbjct: 28  VVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G +     +KEV  +  +   +  R I +P   PY + G 
Sbjct: 88  ALIVL----ALPPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLALPYILNGI 143

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A      +A++ + + + G   L  TGLG Y       G+    +L +L M  F   +
Sbjct: 144 KLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLI 203



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +     QY  +  +  +  +VIS++       + ++ + +    V    +++ IP L  
Sbjct: 11  TNSGQYWQYVGQHIILTVVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLAL 70

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +             + A+ A+    +  +  +       +    +EV  +  + 
Sbjct: 71  LFLLIPFIGTGV--------VPALIALIVLALPPLLINTILGFNEVSPLYKEVGIALGMD 122

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 123 QRQLRRQIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 175

Query: 236 QDLLAILYAMLTMLGVIFL 254
            D+  ++   +++  +  L
Sbjct: 176 YDMSYVVIGAVSVAILSLL 194


>gi|34496649|ref|NP_900864.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34102504|gb|AAQ58869.1| probable ABC-type transport systems, permease components
           [Chromobacterium violaceum ATCC 12472]
          Length = 238

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 17/199 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF 118
           L     R    +  +M ++L        L ++ R        + I +I  ++P +  L  
Sbjct: 40  LIYLGGRHLYLVGVSMALALAVGLPSGILLSRPRLRRSAESWMQIFNIGNTLPPMAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              +  AI A+F + +  +  + Y  L  +P  + E + +  ++  Q
Sbjct: 100 AMAVVGIG--------DAPAIAALFLASLLPIVRNAYAGLAGLPPAMLEAADAIGMTSLQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + W + +P ++P ++  + +++        A    ++G +       G  I   I   + 
Sbjct: 152 RLWRVELPNALPVILSGVRVAL--ALNVGTAPLAFLIGASSY-----GELIFPGIYLNNH 204

Query: 239 LAILYAMLTMLGVIFLYDQ 257
            A+L        +    DQ
Sbjct: 205 TALLLGAGGTALIALALDQ 223



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 8/141 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +I+LG   ++ V V + +A  + +P GI +  RP +    + + Q+       P      
Sbjct: 40  LIYLGGRHLYLVGVSMALALAVGLPSGILL-SRPRLRRSAESWMQIFNIGNTLPPMAVLA 98

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L ++ V              +   +   I+ N  AG +  P    E A +  +T  +   
Sbjct: 99  LAMAVVGIGDA----PAIAALFLASLLPIVRNAYAGLAGLPPAMLEAADAIGMTSLQRLW 154

Query: 496 YIILPGIFPYYVTGAITACGG 516
            + LP   P  ++G   A   
Sbjct: 155 RVELPNALPVILSGVRVALAL 175


>gi|300781610|ref|ZP_07091464.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Corynebacterium genitalium ATCC 33030]
 gi|300533317|gb|EFK54378.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Corynebacterium genitalium ATCC 33030]
          Length = 234

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 11/198 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P   +        A++ ++L           ++R    ++ +   ++++P LG L     
Sbjct: 30  PMRIAEHLGYTFLAVLCAVLIALPIGMYVGHTQRGASAVLAVSGALRALPALGLL----T 85

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +     P  +    + A   +    V  +   +     ++ RD+   +R+   S  Q   
Sbjct: 86  WLAISIPRGISWPIIPATIVLVLLAVAPLLAGVVAGFDSVSRDVVYSARAAGFSERQILR 145

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P + P ++  +          VV      V    I + G+G Y+   +  QD   +
Sbjct: 146 HVELPIAAPTILGGLR-------SCVVQVLATAVVVAYIGMGGLGRYLIDGLAVQDYARM 198

Query: 242 LYAMLTMLGVIFLYDQLL 259
           +   + +  V  + D LL
Sbjct: 199 VAGAIVVTLVALVMDLLL 216



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 79/211 (37%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  Y+ +   +             +    + ++ A +I +P+G+++G     +S +   +
Sbjct: 13  AFTYLTDPTHWSGATGFPMRIAEHLGYTFLAVLCAVLIALPIGMYVGHTQRGASAVLAVS 72

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A PA      +   +      P +  +++++      +L  V+AG  +   D    
Sbjct: 73  GALRALPALGLLTWLAISIPRGISWPIIPATIVLVLLAVAPLLAGVVAGFDSVSRDVVYS 132

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +   +  +  R++ LP   P  + G  +        ++V      G       GLG Y
Sbjct: 133 ARAAGFSERQILRHVELPIAAPTILGGLRSCVVQVLATAVVVAYIGMG-------GLGRY 185

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +      +  +V G +++    L ++  L
Sbjct: 186 LIDGLAVQDYARMVAGAIVVTLVALVMDLLL 216


>gi|293401087|ref|ZP_06645232.1| putative ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291306113|gb|EFE47357.1| putative ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 243

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 99/238 (41%), Gaps = 18/238 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR--TTLRMLSAMVISLL 81
             +L   +  ++     +  VP     +  ++  V S+  Y +   T LR  + ++I+ L
Sbjct: 15  ILLLFWQVFAMVKDN--DMLVPYPWQVVQRMSTQVFSVSFYTTLEVTLLRGFAGLIIAFL 72

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F    A L+ +S     +  P L + +S+P + ++   ++ F            +A I  
Sbjct: 73  FALFCAYLSYRSHIFRDLFYPFLLLTRSVPNISYILIVLIIF---------ARSIAVILI 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F      +  +++ +L ++ +DL EV + +      +   + +P   P +  ++   MS
Sbjct: 124 LFLILFPVIYSNLFSALLHMDKDLMEVMKLYPEKESYEIRRVYLPLLRPSIEASLSAGMS 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   V +E++          GIG  + L     D++ +      M+ ++ L D++L
Sbjct: 184 LAFKVGVMAEILGGMQE-----GIGRELNLCRLNFDMIGMFAWTGWMIFLLVLMDRIL 236



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+ R    +IIA +  +                 PF  L  + P   +  +++  + + 
Sbjct: 58  VTLLRGFAGLIIAFLFALFCAYLSYRSHIFRDLFYPFLLLTRSVPNISY--ILIVLIIFA 115

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + +  L++F   +  LF+ +        D  EV   +        R + LP + P
Sbjct: 116 RSIAVILILFLILFPVIYSNLFSALL---HMDKDLMEVMKLYPEKESYEIRRVYLPLLRP 172

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                       A+   +++E+           G+G  +           +      M  
Sbjct: 173 SIEASLSAGMSLAFKVGVMAEILGG-----MQEGIGRELNLCRLNFDMIGMFAWTGWMIF 227

Query: 565 FVLALNRFL 573
            ++ ++R L
Sbjct: 228 LLVLMDRIL 236


>gi|42518715|ref|NP_964645.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583001|gb|AAS08611.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329666979|gb|AEB92927.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 330

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A   A       S++    L  +++++  IP + +    LT  V +
Sbjct: 115 FSVTLLAALVATPFAIAVALFMTEYSSKKGARFLQSVIELLVGIPSVVYGFLGLTVIVPF 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 175 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 233

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 234 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 267



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I +            + 
Sbjct: 87  VFQFLTSSDWDPGEGKNHVGAAAMIVTSFSVTLLAALVATPFAIAVALFMTEYSSKKGAR 146

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+  L ++ +       +      +  + L++F      + +  +
Sbjct: 147 FLQSVIELLVGIPSVVYGFLGLTVIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 207 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 266

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 267 NAVLMPAN 274


>gi|99081336|ref|YP_613490.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99037616|gb|ABF64228.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 305

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  +   T    L    I      + A     SR 
Sbjct: 76  LPAPHQVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSRV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P   + Q+IPI+      +V   ++    ++   + A +  F    + +   M 
Sbjct: 136 MDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGLLPKAIIAAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +      ++ +++  S  Q FW L +P SMP L  ++ + ++      +  E+   
Sbjct: 192 KGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASLVGAIVGEL--- 248

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 249 --PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++   I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +  +   ++  +++ +  + +  +
Sbjct: 160 IVVLYSIGVQGLLPKAIIAAYLSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|156933913|ref|YP_001437829.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532167|gb|ABU76993.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894]
          Length = 216

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +L A+  +++       L  + + L   ++ +  ++ +IP +   
Sbjct: 11  NAGFLASLTFQHLWLVLLAVGFAIVIGVPLGILIVRHKWLATPVLGLATLVLTIPSIALF 70

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 71  GLMIPLFSLIGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 127

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 128 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 180

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 181 DIRMLIAGALMICLLAIILDWLLHRLQVVLTPK 213



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  ++  L    ++ V++ +  A +I +P+GI I     +++ +   A L+   P
Sbjct: 6   HYMIDNAGFLASLTFQHLWLVLLAVGFAIVIGVPLGILIVRHKWLATPVLGLATLVLTIP 65

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S          ++  +   +   I+ N      + P   +E      +
Sbjct: 66  SIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 125

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 126 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGIG 178

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 179 GSDIRMLIAGALMICLLAIILDWLLHR 205


>gi|110802534|ref|YP_698784.1| ABC transporter permease [Clostridium perfringens SM101]
 gi|110683035|gb|ABG86405.1| ABC transporter, permease protein [Clostridium perfringens SM101]
          Length = 251

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P    + +   +      +    T  R   +  +SL+ 
Sbjct: 17  VTLFILWQLASMIIGSEVILPSPYLTFNGLIEVIKSSDFFKIIINTLGRTFISFTLSLVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A ++ +   ++PIL++M+S P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFSAFNKYVYNFMIPILNVMRSFPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + L+       + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKVYELNIGNLIKNIYLPSISFAICRIMISTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------------TMFRVVVLI 394
              +  V + I WQ    I+         Y+ + G I              T+ R  +  
Sbjct: 11  LIFLSSVTLFILWQLASMIIGSEVILPSPYLTFNGLIEVIKSSDFFKIIINTLGRTFISF 70

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
            ++ +I + +G++  F  ++ + + P   ++ +FP   F  L +  +S           +
Sbjct: 71  TLSLVIALFLGVFSAFNKYVYNFMIPILNVMRSFPTIGFIILALIWLSQG------IAPI 124

Query: 455 LMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L+ F   + I ++ I GA      +  E+A  + +      + I LP I        I+ 
Sbjct: 125 LVGFVMSFPIFYDAIIGAILNIDKNILEMAKVYELNIGNLIKNIYLPSISFAICRIMIST 184

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                   +  EV           G+G  +       +   V   
Sbjct: 185 FSLTMKLVVGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFAW 224


>gi|83953427|ref|ZP_00962149.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
 gi|83842395|gb|EAP81563.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
          Length = 279

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +    P  ++ L +       L   W  +V G+ I         ++       +  +  
Sbjct: 20  RLARLRPARWVSLAAPLVFGATLIAVWEGIVRGLEISQVLLPAPSLIALRLVSSLDILWV 79

Query: 382 LGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               T+ +  +   ++       + + I   P +   + P    +AA P     P++V  
Sbjct: 80  DFVQTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPVIGMAPILVMW 139

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             +   +    + +++ F     +L N + G  A     +++  ++  + W     + LP
Sbjct: 140 FGFDWQSKAAVVVVMVFF----PMLVNTVQGLQATDAMQRDLMRTYAASYWATLFKLRLP 195

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+   G       A   +IV+E            G+G  I+ S  + +   V   ++
Sbjct: 196 AAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVRGMGFRISTSVGQLALDLVWAEIV 250

Query: 561 IMCCFVLAL 569
           +      A 
Sbjct: 251 VAAIAGSAF 259



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 24/269 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHG-------IQETTVPRDIVDIVPITLDVHSLPQYAS 66
           R+ P  +  LA  LV G   I +         I +  +P   +  + +   +  L     
Sbjct: 23  RLRPARWVSLAAPLVFGATLIAVWEGIVRGLEISQVLLPAPSLIALRLVSSLDILWVDFV 82

Query: 67  RTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T L+  LS  V+     F+ A    +   L   L+P+ + + ++P++G     V++F  
Sbjct: 83  QTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPVIGMAPILVMWFGF 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +  K     +   F         M  +  Q L        ++ R++  S W   + L +
Sbjct: 143 DWQSKAAVVVVMVFF--------PMLVNTVQGLQATDAMQRDLMRTYAASYWATLFKLRL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +  +      + +E         P+ G+G  I+ ++ +  L  +   +
Sbjct: 195 PAAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVRGMGFRISTSVGQLALDLVWAEI 249

Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271
           +        +     L  R +  W    R
Sbjct: 250 VVAAIAGSAFYGAMSLFERRVTFWHPSQR 278


>gi|261337465|ref|ZP_05965349.1| putative ABC transporter permease protein [Bifidobacterium gallicum
           DSM 20093]
 gi|270277857|gb|EFA23711.1| putative ABC transporter permease protein [Bifidobacterium gallicum
           DSM 20093]
          Length = 247

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +A +LV+  + + L  + ET +   +  +  I     +L      T    +   +++  
Sbjct: 3   TVALLLVVWQVWVSLAHVSETMISSPVQIVQAIVTSWPTLWPATWVTLYEGVIGFLLACA 62

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +       SR     L P+L   Q++P++      +++F     GK        I  
Sbjct: 63  LGVLLGIGIHCSRTAYAALFPLLAAAQTLPLISIAPLFLIWFGFEPIGK--------IVL 114

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    ++ +     + L  +P+  ++V+ +   S     +++ +  +   +   M +S  
Sbjct: 115 VAIFALFPIAVQTMRGLQAVPQFYDDVAMTCGASRSWTLFHVDLRVAARQIFGGMRVS-- 172

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G + F  A+    +G       G+G ++  A        I  A + ++ +  L 
Sbjct: 173 GAYVFATAATAEYLGARQ----GLGIWLQAAYNSFRTPLIFAATVVIIIMTALL 222



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L + W   V    +     S    +          +     +T++  V+  ++A  + +
Sbjct: 6   LLLVVWQVWVSLAHVSETMISSPVQIVQAIVTSWPTLWPATWVTLYEGVIGFLLACALGV 65

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +GI I       + + P        P     PL +    +  +   + +++       +
Sbjct: 66  LLGIGIHCSRTAYAALFPLLAAAQTLPLISIAPLFLIWFGFEPIGKIVLVAIF----ALF 121

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I    + G  A P  + +VA +   +      ++ L         G   +    +  + 
Sbjct: 122 PIAVQTMRGLQAVPQFYDDVAMTCGASRSWTLFHVDLRVAARQIFGGMRVSGAYVFATAA 181

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +E            GLG ++  +      P +    +++      L
Sbjct: 182 TAEYLG------ARQGLGIWLQAAYNSFRTPLIFAATVVIIIMTALL 222


>gi|149185008|ref|ZP_01863325.1| ABC transporter permease protein [Erythrobacter sp. SD-21]
 gi|148831119|gb|EDL49553.1| ABC transporter permease protein [Erythrobacter sp. SD-21]
          Length = 512

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 72/204 (35%), Gaps = 11/204 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG----F 115
            L    +   L   +A+ + +      A  A++S ++    +    ++Q+IP L     F
Sbjct: 10  GLGDQLAAHVLLSAAAIALGIAVALPLAVWASRSEKVARAALTFASLVQTIPALALLALF 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +               L A+ A+    +  +  +   +  N+   + E +    +S
Sbjct: 70  FPILLSLRAVFGEWLPTLGFLPALLALALYALLPILRNAVTAQANLDPGVNEAAEGVGMS 129

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+   +  P + P ++  +  +    W    A+    +G        +G  I   ++ 
Sbjct: 130 FRQRLLLVEAPLAAPYIMAGIRTA--AVWTIGAATLATTIGQKS-----LGDPIFAGLQT 182

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
           Q+ + +L   +    +  L D LL
Sbjct: 183 QNWVLVLAGCIASASLALLADTLL 206



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 61/209 (29%), Gaps = 15/209 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +  ++ +       +      I +   + +P+ +W      ++     FA L+   PA  
Sbjct: 5   WDALMGLGDQLAAHVLLSAAAIALGIAVALPLAVWASRSEKVARAALTFASLVQTIPALA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF--------NVIAGASAFPNDFKEVAS 484
              L    +         WL  L        +          N +   +       E A 
Sbjct: 65  LLALFFPILLSLRAVFGEWLPTLGFLPALLALALYALLPILRNAVTAQANLDPGVNEAAE 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              ++  +    +  P   PY + G  TA      A+ ++         +    LG  I 
Sbjct: 125 GVGMSFRQRLLLVEAPLAAPYIMAGIRTAAVWTIGAATLA-------TTIGQKSLGDPIF 177

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              +  ++  V+ G +      L  +  L
Sbjct: 178 AGLQTQNWVLVLAGCIASASLALLADTLL 206


>gi|229823996|ref|ZP_04450065.1| hypothetical protein GCWU000282_01300 [Catonella morbi ATCC 51271]
 gi|229786350|gb|EEP22464.1| hypothetical protein GCWU000282_01300 [Catonella morbi ATCC 51271]
          Length = 505

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 18/141 (12%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              +   A  RRL   ++ +  I+Q+IP L  L   + +             L AI  + 
Sbjct: 38  VPLSIFLANYRRLAAWVLQLTGIVQTIPSLAILGLLIPFIGIG--------TLPAIVTLV 89

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++ +  +   +   +   LEE + +F ++ W+K     +  +MP ++  +       
Sbjct: 90  VYGLFPIVQNTITAFWELDPQLEEAATAFGMTRWEKLRKYQLALAMPVMMSGIR------ 143

Query: 204 WFFVVASEMIVVGDTVIPLPG 224
                A+ MI+   T+  L G
Sbjct: 144 ----TAAVMIIGTATLAALIG 160



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 66/177 (37%), Gaps = 18/177 (10%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+ I++     +++ +     ++   P+     L++  +    L     +  L+++G  
Sbjct: 38  VPLSIFLANYRRLAAWVLQLTGIVQTIPSLAILGLLIPFIGIGTLP---AIVTLVVYG-L 93

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           + I+ N I          +E A++F +T W   R   L    P  ++G  TA       +
Sbjct: 94  FPIVQNTITAFWELDPQLEEAATAFGMTRWEKLRKYQLALAMPVMMSGIRTAAVMIIGTA 153

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL-------IMCCFVLALNR 571
            ++ +   G +               ++     +++G +       ++   + AL +
Sbjct: 154 TLAALIGAGGLGSLIL-------LGIDRNDSALILIGAISSAFLAVVISLILGALTK 203


>gi|87119090|ref|ZP_01074988.1| ABC transporter, permease protein [Marinomonas sp. MED121]
 gi|86165481|gb|EAQ66748.1| ABC transporter, permease protein [Marinomonas sp. MED121]
          Length = 271

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 11/214 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
           + +I  +    + +   Y+ W   ++ + R+++ +  A+ I + +G+  G  P +++   
Sbjct: 53  YSAIDRLAFTPSKRTGEYLFWKDTLSSLKRLLMGVACAAAIALILGLITGAIPLVAANFN 112

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P    ++  P     PL+        L+      +L+I G   +++ ++       P + 
Sbjct: 113 PIITTISLIPPMAVLPLLFIVFGLGELSK----VMLIIVGITPFLIRDLYQKTKEIPQEQ 168

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A +      +    ++LP + P  +     + G AW   I +           T GL
Sbjct: 169 LVKAQTLGANSVQLINRVLLPQVLPRLLDALRLSLGTAWLFLIAA------EAIAATEGL 222

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I       S   ++  V+ +      L+  L
Sbjct: 223 GYRIFLVRRYLSMDIILPYVIWITFLAFLLDWLL 256



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 81/226 (35%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL  + +     D +   P       L  +    +  R+L  +  +     +   +    
Sbjct: 45  LLPSVSQFYSAIDRLAFTPSKRTGEYLFWKDTLSSLKRLLMGVACAAAIALILGLITGAI 104

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             +     PI+  +  IP +  L    + F           EL+ +  I       +   
Sbjct: 105 PLVAANFNPIITTISLIPPMAVLPLLFIVFGLG--------ELSKVMLIIVGITPFLIRD 156

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +YQ    IP++    +++   +  Q    + +P  +P L+  + +S+   W F++     
Sbjct: 157 LYQKTKEIPQEQLVKAQTLGANSVQLINRVLLPQVLPRLLDALRLSLGTAWLFLI----- 211

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              + +    G+G  I L  +   +  IL  ++ +  + FL D LL
Sbjct: 212 -AAEAIAATEGLGYRIFLVRRYLSMDIILPYVIWITFLAFLLDWLL 256


>gi|115524212|ref|YP_781123.1| substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisA53]
 gi|115518159|gb|ABJ06143.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisA53]
          Length = 516

 Score = 70.7 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 81/213 (38%), Gaps = 21/213 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ 111
           +  LP Y        ++A+ + L  +   A L+         L+    I+Q+IP      
Sbjct: 13  LAHLPDYLGSHLRVSIAALALGLAVSLPLAILSRDKPVWRSALLGFAGIVQTIPGLALLA 72

Query: 112 -----ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                +L     T  +F   +        L A+ A+    +  +  +   +L  +   L 
Sbjct: 73  LFYPLLLALAALTTSWFGIGFSA---FGFLPAVLALALYSMLPVLRNTITALNGVDPVLT 129

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R   ++  Q  W + +P + P ++  +  +    W    A+    +G T      +G
Sbjct: 130 EAARGVGMTQPQSLWMIELPLAAPVIMAGIRTA--AVWVIGTATLATPIGQTS-----LG 182

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +YI   ++ Q+ + + +  ++   +    DQ+L
Sbjct: 183 NYIFAGLQTQNWVLVAFGCVSAAALAITVDQVL 215



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 20/220 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +     + + L  +     +  RV +  + +   + +P+ I    +P   S +  FA ++
Sbjct: 3   LFTDPRWNEALAHLPDYLGSHLRVSIAALALGLAVSLPLAILSRDKPVWRSALLGFAGIV 62

Query: 426 AAFP-----------ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGAS 473
              P                 L  S             ++L +   +   +L N I   +
Sbjct: 63  QTIPGLALLALFYPLLLALAALTTSWFGIGFSAFGFLPAVLALALYSMLPVLRNTITALN 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    I LP   P  + G  TA       + ++         
Sbjct: 123 GVDPVLTEAARGVGMTQPQSLWMIELPLAAPVIMAGIRTAAVWVIGTATLA-------TP 175

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +  T LG YI    +  ++  V  G +      + +++ L
Sbjct: 176 IGQTSLGNYIFAGLQTQNWVLVAFGCVSAAALAITVDQVL 215


>gi|171316825|ref|ZP_02906035.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097995|gb|EDT42812.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 255

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I +L          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSLIGMLVAIAAGIAVTRPAGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++  +   +L   + +  +  L +  +
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLVNDAI 243



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 15/199 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I  ++ I  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGMLVAIAAGIAV-TRPAGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLALN 570
              V+ G +I+    + +N
Sbjct: 222 TAFVLQGGVIVGLLAVLVN 240


>gi|271969377|ref|YP_003343573.1| proline/glycine betaine ABC transporter [Streptosporangium roseum
           DSM 43021]
 gi|270512552|gb|ACZ90830.1| proline/glycine betaine ABC transporter [Streptosporangium roseum
           DSM 43021]
          Length = 223

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 10/208 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             I +  N   +     +       +    + +++A +I +P+G+WIG     +      
Sbjct: 3   WLIDFFGNPDNWSGPDGIPVRLLEHLEFSGLSLLLAMLIALPLGLWIGHTGRGALFAILS 62

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A    A P      L+V  +    + P   L  L+       IL N   G      D ++
Sbjct: 63  ANAARALPTLGLLVLIVLLMGVGTIVPV--LIPLVAL-AVPPILVNTYEGLRGVDPDLRD 119

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    + G      +++P   P  + G   A     + + V+     G       GLG 
Sbjct: 120 AAYGMGLRGGEVLGRVLVPVALPLILLGLRIAAIQVVSTATVAAYVGLG-------GLGR 172

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +I +      FP  + G +++    L +
Sbjct: 173 FIVDGLATKDFPRTIGGAVLVALLALIV 200



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 73/203 (35%), Gaps = 15/203 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P            ++++++L           + R  +  +   +  +++P      
Sbjct: 17  PDGIPVRLLEHLEFSGLSLLLAMLIALPLGLWIGHTGRGALFAILSANAARALP------ 70

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            T+   + +     +G  +  +  +    V  +  + Y+ L  +  DL + +    L G 
Sbjct: 71  -TLGLLVLIVLLMGVGTIVPVLIPLVALAVPPILVNTYEGLRGVDPDLRDAAYGMGLRGG 129

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + VP ++P ++  + ++          +  + +G       G+G +I   +  +D
Sbjct: 130 EVLGRVLVPVALPLILLGLRIAAIQVVSTATVAAYVGLG-------GLGRFIVDGLATKD 182

Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260
               +     ++ ++ L  QL F
Sbjct: 183 FPRTI-GGAVLVALLALIVQLGF 204


>gi|110635309|ref|YP_675517.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110286293|gb|ABG64352.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 211

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 11/181 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +V + IA++I IP G  +   P I+  I   A  + + P+       +  +     
Sbjct: 25  LFMSLVSLGIAAVIAIPTGFSVARSPRIAFFIINVAGAVRSIPSLAILSAALPILGIGIA 84

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L I      +L N I G         + A+   +        I +P   P  
Sbjct: 85  PSIVALVVLAIP----PLLLNTITGVREIDVSVLDAANGMGMGRQDILWQIEVPLATPAI 140

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +TG  TA       + ++     G       GLG +I         P +++G + +    
Sbjct: 141 ITGVRTAAIQVIGGAALASFIGGG-------GLGDFINTGIAIMDLPRLLVGAIPIALLS 193

Query: 567 L 567
           +
Sbjct: 194 I 194



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +     L ++ I+ +         A+S R+   ++ +   ++SIP L  L+  +      
Sbjct: 23  QHLFMSLVSLGIAAVIAIPTGFSVARSPRIAFFIINVAGAVRSIPSLAILSAALPILGIG 82

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                      +I A+    +  +  +    +  I   + + +    +      W + VP
Sbjct: 83  I--------APSIVALVVLAIPPLLLNTITGVREIDVSVLDAANGMGMGRQDILWQIEVP 134

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P ++  +  +          +  I  G       G+G +I   I   DL  +L   +
Sbjct: 135 LATPAIITGVRTAAIQVIGGAALASFIGGG-------GLGDFINTGIAIMDLPRLLVGAI 187

Query: 247 TMLGV 251
            +  +
Sbjct: 188 PIALL 192


>gi|205373059|ref|ZP_03225865.1| glycine betaine transport system permease protein [Bacillus
           coahuilensis m4-4]
          Length = 121

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +          +  +P DL E S +F  +  QK + + +P +   ++  +  S+  
Sbjct: 4   LFFAMPPTIRLTNLGIRQVPEDLVEASNAFGSTTGQKLFKVQLPLATKTIMAGINQSIML 63

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               VV + ++         PG+G Y+  A+   ++     A L+++ +    D++
Sbjct: 64  SLSMVVIASLV-------GAPGLGVYVYRAVTRIEVGTGFEAGLSIVILAIFLDRI 112



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 7/116 (6%)

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +F      +     G    P D  E +++F  T  +    + LP      + G   +   
Sbjct: 4   LFFAMPPTIRLTNLGIRQVPEDLVEASNAFGSTTGQKLFKVQLPLATKTIMAGINQSIML 63

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           + +  +++ +           GLG Y+  +  +          L +    + L+R 
Sbjct: 64  SLSMVVIASLVG-------APGLGVYVYRAVTRIEVGTGFEAGLSIVILAIFLDRI 112


>gi|302390702|ref|YP_003826523.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302201330|gb|ADL08900.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 213

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +       A+V+++        L  +   +   ++ + + +Q+IP L FL F V  F 
Sbjct: 21  TGQHIQLSFIAIVVAIAIGVPLGILMTRFPSISSFILGLANAVQAIPSLAFLGFLVPIFG 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        +I  +    +  +  + Y  L  I + + E      ++  Q    + 
Sbjct: 81  IGSTP--------SIVMVSAYALLPIVKNTYTGLTGIDKAIVEAGLGMGMTEQQLMTMVR 132

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +++     F   + +I  G       G+G  I   I   +   I+  
Sbjct: 133 IPMALPVIMAGVRIAVVMAVGFTTLAALIGAG-------GLGQLIYRGISMVNSRMIVAG 185

Query: 245 MLTMLGVIFLYDQLL 259
            +  + +    D++ 
Sbjct: 186 AVPAMILALAIDKIF 200



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + I++A  I +P+GI +   P ISS I   A  + A P+  F   +V           +
Sbjct: 29  FIAIVVAIAIGVPLGILMTRFPSISSFILGLANAVQAIPSLAFLGFLVPIFGIGSTPSIV 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +S   +      I+ N   G +       E      +T  +    + +P   P  + G 
Sbjct: 89  MVSAYALL----PIVKNTYTGLTGIDKAIVEAGLGMGMTEQQLMTMVRIPMALPVIMAGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   + ++ +   G       GLG  I       +   +V G +      LA++
Sbjct: 145 RIAVVMAVGFTTLAALIGAG-------GLGQLIYRGISMVNSRMIVAGAVPAMILALAID 197

Query: 571 RFLW 574
           +  +
Sbjct: 198 KIFY 201


>gi|229187046|ref|ZP_04314196.1| ABC transporter permease protein [Bacillus cereus BGSC 6E1]
 gi|228596435|gb|EEK54105.1| ABC transporter permease protein [Bacillus cereus BGSC 6E1]
          Length = 244

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G AW   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLAWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWDLFLNKWLDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLAWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|315648220|ref|ZP_07901321.1| hypothetical protein PVOR_23209 [Paenibacillus vortex V453]
 gi|315276866|gb|EFU40209.1| hypothetical protein PVOR_23209 [Paenibacillus vortex V453]
          Length = 218

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            +L    L          +L +MVI+++       L ++   L   ++    I+Q+IP L
Sbjct: 14  FSLRWGELLVSVGEHIQLVLISMVIAIIIGVPAGILVSRYSFLRTWIIGGASILQTIPSL 73

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +                 AI A+F   +  +  + +  + ++   + E +R   
Sbjct: 74  ALLGFMIPLLGIGM--------KTAIAALFLYSLLPIIRNTFTGIKDVDPSVIEAARGMG 125

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++G Q    + +P +M  ++  +  +          +  I  G       G+G +I L I
Sbjct: 126 MTGTQILLRVQLPLAMSVILAGIRTATVINVGTATLAAFIGAG-------GLGDFIFLGI 178

Query: 234 KEQDLLAILYAMLTMLGV 251
                  IL   L    +
Sbjct: 179 TRNIDALILLGALPAAIM 196



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 11/185 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++      +  V++ ++IA II +P GI +     + + I   A +L   P+     
Sbjct: 18  WGELLVSVGEHIQLVLISMVIAIIIGVPAGILVSRYSFLRTWIIGGASILQTIPSLALLG 77

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            ++  +              +   +   I+ N   G         E A    +TG +   
Sbjct: 78  FMIPLLGIG----MKTAIAALFLYSLLPIIRNTFTGIKDVDPSVIEAARGMGMTGTQILL 133

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP      + G  TA       + ++     G       GLG +I     +     +
Sbjct: 134 RVQLPLAMSVILAGIRTATVINVGTATLAAFIGAG-------GLGDFIFLGITRNIDALI 186

Query: 556 VLGVL 560
           +LG L
Sbjct: 187 LLGAL 191


>gi|289804630|ref|ZP_06535259.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 213

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
           +   + +P + P ++  + ++
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA 171



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A       + ++ 
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLAF 183

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +          +  G  I        FP ++LG
Sbjct: 184 LIG-------ASSYGELIFPGIYLNDFPTLILG 209


>gi|209517906|ref|ZP_03266739.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gi|209501622|gb|EEA01645.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 287

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q + + VN  +   +L  +W   +T+    +  II S+  I  GI +G    +S     +
Sbjct: 74  QIVDWFVNGTSQGPLLTQVW---VTLEETGLGFIIGSVAGIFCGIVLGRNKLLSDVFSLY 130

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            ++  + P  V   + V  +     +      +++ F        N   G          
Sbjct: 131 IKIANSIPRVVLGSVFVIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIA 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     +  +    +++P    + +     + G A   ++V E            G+G 
Sbjct: 187 NAQILGASRRQVTTSVVIPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGL 240

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I+ +    +   V   ++++    LA +  L
Sbjct: 241 LISTAQGAFNASGVFAAMIVLAVVALAADYLL 272



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGIFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL      ++ W
Sbjct: 261 LAVVALAADYLLTAVENRLLKW 282


>gi|327393231|dbj|BAK10653.1| inner membrane ABC transporter permease protein YehY [Pantoea
           ananatis AJ13355]
          Length = 393

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 16/242 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI-SLLFTFV 85
           LV+ ++  +L      +   D + ++    +  S+   A    L +L+A V+ +LL  F 
Sbjct: 145 LVLNLLVWILPLWLLFSGQLDDLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFP 204

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--------GKVIGAELA 137
              +  +       +  +L+++Q++P +      +     L          G        
Sbjct: 205 LGIVLYRRSGWQSSVFGVLNVVQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAP 264

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    +  +  S+   L  +P D+ E +R   LSG Q+F+ + VP ++P  +  + 
Sbjct: 265 ALIALVLYALLPLVRSVVTGLQQVPPDVRESARGMGLSGRQQFFAVEVPLALPVWLSGIR 324

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +       V + +I  G       G G+ I   +    L  +L  ++ ++ +    D 
Sbjct: 325 VVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA 377

Query: 258 LL 259
           L 
Sbjct: 378 LF 379



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 91/250 (36%), Gaps = 25/250 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
              +  +    +V  + + + +      +  +  +   Q V     L  +T+      ++
Sbjct: 139 RRRLWQLVLNLLVWILPLWLLFSGQLDDLSLLKEYANRQSVFDAALLRHLTLL--AATVL 196

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS----------CVSYYH 445
            A +I  P+GI +  R    S +     ++   P+   F L+++              + 
Sbjct: 197 PALLIAFPLGIVLYRRSGWQSSVFGVLNVVQTVPSVALFGLLIAPLAGLAKRFPWAGAWG 256

Query: 446 LNPNLWLSLLM--IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           ++       L+  +      ++ +V+ G    P D +E A    ++G + +  + +P   
Sbjct: 257 ISGIGMAPALIALVLYALLPLVRSVVTGLQQVPPDVRESARGMGLSGRQQFFAVEVPLAL 316

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +++G           ++V+ +   G       G GA I +     +   V+LGV+ + 
Sbjct: 317 PVWLSGIRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSNALDLVLLGVIPVI 369

Query: 564 CFVLALNRFL 573
              + L+   
Sbjct: 370 AMAVTLDALF 379


>gi|307707862|ref|ZP_07644339.1| ABC transporter, permease protein [Streptococcus mitis NCTC 12261]
 gi|307616122|gb|EFN95318.1| ABC transporter, permease protein [Streptococcus mitis NCTC 12261]
          Length = 238

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  +     D   L  ++  T    L  +V+ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQSFVRDREFLWHHSWATLRVALLGLVLGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 47  ATLRVALLGLVLGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 106

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 107 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 162

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 163 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|229101488|ref|ZP_04232225.1| ABC transporter, permease [Bacillus cereus Rock3-28]
 gi|228681922|gb|EEL36062.1| ABC transporter, permease [Bacillus cereus Rock3-28]
          Length = 185

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 8/130 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  +VIS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GYTI--------WSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLV 193
            +P ++P   
Sbjct: 167 KLPSALPYFF 176



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 67/175 (38%), Gaps = 5/175 (2%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    S +L ++         + I       ++  +  +D+L+ + L   T++ V++ 
Sbjct: 8   VPAITLSSILLVMWEIGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPA-TLYVVLIG 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++I+ ++ + + + +     +     P        P     PL V    Y          
Sbjct: 67  VVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYT----IWSKV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   PY+ +
Sbjct: 123 VVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFS 177


>gi|218548809|ref|YP_002382600.1| ABC transporter membrane protein [Escherichia fergusonii ATCC
           35469]
 gi|218356350|emb|CAQ88968.1| putative ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
          Length = 244

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           VL    I +L+  I    V  + +    +      L     +    + +++  +LL    
Sbjct: 17  VLGFTFIVLLVMAILIWGVGLETLKARQVD-----LIYLGQQHLFLVFTSLFFALLIGVP 71

Query: 86  YATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              L ++   R      + I ++  ++P L  L   ++             +  AI A+F
Sbjct: 72  SGILLSRPAARGFAEHAMQIFNVGNTLPPLAVLALAMIILGIG--------DTPAIVALF 123

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +  +  + Y  L  +P  L+E ++   ++ WQ+ + + +P + P ++  + ++    
Sbjct: 124 LASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLVELPNAWPVMLSGIRIA--AA 181

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                A    ++G +       G  I   I   D   ++           + D LL
Sbjct: 182 IIVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDSLL 232



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+       P      
Sbjct: 47  LIYLGQQHLFLVFTSLFFALLIGVPSGILL-SRPAARGFAEHAMQIFNVGNTLPPLAVLA 105

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +            + +   +   I+ N  AG +A P   KE A    +T W+   
Sbjct: 106 LAMIILGIGDT----PAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLY 161

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  ++G   A       + ++ +          +  G  I        FP +
Sbjct: 162 LVELPNAWPVMLSGIRIAAAIIVGTAPLAFLIG-------ASSYGELIFPGIYLNDFPTL 214

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LG      F L L+  L
Sbjct: 215 ILGATATALFALILDSLL 232


>gi|163795328|ref|ZP_02189295.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
 gi|159179314|gb|EDP63845.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
          Length = 340

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 19/269 (7%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
             +         +      +   +    R   +L    F V   V      +  G     
Sbjct: 60  WMLLLAAWASAWLFVERLLDLGPIVRQDRFVRLLVPICFGVWILVVWEAVVRGAGIPSVL 119

Query: 371 FTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVG--------IWIGFRPHISSKIQP 420
                 + V  L  G +         + A +I   +G        I I   P +   + P
Sbjct: 120 LPPPSAIGVRLLSSGAVLWADFRQTFLQAVLIGYTLGCGSAFLCAIAIDRSPFLQRGLLP 179

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               ++A P     P++V    +   +     + +++  T + +L N +AG +A  +  +
Sbjct: 180 LGNFVSALPIIGIAPILVMWFGFDWPSK----AAVVVVMTFFPMLVNTVAGLAASGSMER 235

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           ++  ++    W+    + LP   P+           A   +IV+E          T G+G
Sbjct: 236 DLMRTYAAGYWQTLFKLRLPAAAPFIFNALKINSTLALIGAIVAEFFG-----TPTVGMG 290

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I+    + +   V   + +        
Sbjct: 291 FRISTEVGRMNIDMVWAEIAVAAVAGSTF 319



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 84/238 (35%), Gaps = 14/238 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   I   +  ++V   +            P   + +  ++        +       +L
Sbjct: 91  RLLVPICFGVWILVVWEAVVRGAGIPSVLLPPPSAIGVRLLSSGAVLWADFRQTFLQAVL 150

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +     F+ A    +S  L   L+P+ + + ++PI+G     V++F   +P K   
Sbjct: 151 IGYTLGCGSAFLCAIAIDRSPFLQRGLLPLGNFVSALPIIGIAPILVMWFGFDWPSKAA- 209

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   +     + M  +    L        ++ R++    WQ  + L +P + P + 
Sbjct: 210 -------VVVVMTFFPMLVNTVAGLAASGSMERDLMRTYAAGYWQTLFKLRLPAAAPFIF 262

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + ++ +      + +E         P  G+G  I+  +   ++  +++A + +  V
Sbjct: 263 NALKINSTLALIGAIVAEFFGT-----PTVGMGFRISTEVGRMNID-MVWAEIAVAAV 314


>gi|156933915|ref|YP_001437831.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532169|gb|ABU76995.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894]
          Length = 237

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +  + + S+M ++L        L ++   RR     + I ++  ++P L  L  
Sbjct: 40  LLYLGKQHLILVFSSMALALAVGIPSGILLSRPAARRFAEYAMQIFNVGNTLPPLAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++  Q
Sbjct: 100 AMVVVGIG--------DKPAIVALFLASLLPIVRNTYAGLCSVPGSLIEAANGIGMTKGQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + W + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 152 RLWQVELPNAWPVMLSGIRIA--TAINVGTAPLAFLIGASSF-----GELIFPGIYLNDF 204

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D  L
Sbjct: 205 PTLILGAAATALFALILDMAL 225



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +++LG   +  V   + +A  + IP GI +  RP      +   Q+       P      
Sbjct: 40  LLYLGKQHLILVFSSMALALAVGIPSGILL-SRPAARRFAEYAMQIFNVGNTLPPLAVLA 98

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  V            + +   +   I+ N  AG  + P    E A+   +T  +   
Sbjct: 99  LAMVVVGIGDK----PAIVALFLASLLPIVRNTYAGLCSVPGSLIEAANGIGMTKGQRLW 154

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  ++G   A       + ++ +          +  G  I        FP +
Sbjct: 155 QVELPNAWPVMLSGIRIATAINVGTAPLAFLIG-------ASSFGELIFPGIYLNDFPTL 207

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LG      F L L+  L
Sbjct: 208 ILGAAATALFALILDMAL 225


>gi|197658977|emb|CAR47850.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Rhodococcus sp. PY11]
          Length = 270

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 14/218 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            +I D +   L    L      T  R+    V S+L   V    A     L   L PIL 
Sbjct: 61  SEIADSLTTVLSGPQLLDDGLVTLRRVALVTVASVLGGTVIGLAAGFCWPLRAFLRPILV 120

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I  ++P L ++   ++         ++   +A +  +    +         ++ +    L
Sbjct: 121 IGLAVPDLVYIIMAILILGATETSGMVAVTVAIVPLVANVVI--------AAVTDRDTSL 172

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           +E++ ++R   W    ++ +    P +   +    +  W  VV  E I          GI
Sbjct: 173 DEMAATYRFGRWDYARHVLLDQLKPAMAAAVRTGFAFSWKLVVLMETIT------TPDGI 226

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           G+ I  A +      ++   L  + V+   + ++  P+
Sbjct: 227 GARIYEAFRFLRPQDMIAYALVFIVVMKFVEWVIVLPL 264



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 85/207 (41%), Gaps = 12/207 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++  G +T+ RV ++ + + +    +G+  GF   + + ++P   +  A P  V+  + 
Sbjct: 75  QLLDDGLVTLRRVALVTVASVLGGTVIGLAAGFCWPLRAFLRPILVIGLAVPDLVYIIMA 134

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
           +  +     +  + +++ ++      ++ NV IA  +       E+A+++    W + R+
Sbjct: 135 ILILGATETSGMVAVTVAIV-----PLVANVVIAAVTDRDTSLDEMAATYRFGRWDYARH 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++L  + P       T    +W   ++ E  +         G+GA I E+       +++
Sbjct: 190 VLLDQLKPAMAAAVRTGFAFSWKLVVLMETITTPD------GIGARIYEAFRFLRPQDMI 243

Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583
              L+    +  +   +  PL     R
Sbjct: 244 AYALVFIVVMKFVEWVIVLPLRPSARR 270


>gi|92118229|ref|YP_577958.1| substrate-binding region of ABC-type glycine betaine transport
           system [Nitrobacter hamburgensis X14]
 gi|91801123|gb|ABE63498.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Nitrobacter hamburgensis X14]
          Length = 519

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 88/224 (39%), Gaps = 21/224 (9%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            ++     +  +  LP Y        ++A+ + L  +F  A +      +  VL+ +  I
Sbjct: 2   SLLSDPLWSEALGHLPDYLGNHVRVSVAALGLGLATSFPLALIVRTRPVMRSVLLGLASI 61

Query: 107 MQSIP-----------ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +Q++P           +L     T+ +F   +        L A+ A+    +  +  +  
Sbjct: 62  VQTVPGLALLALFYPLLLALAALTLTWFGVGFSA---FGFLPAVLALALYSMLPVLRNTI 118

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L  I   L E ++   ++  Q    + +P ++P ++  +  +    W    A+    +
Sbjct: 119 TGLQAIDPALTEAAQGVGMTARQSLVMVELPLALPIIMAGIRTA--AVWVIGTATLSTPI 176

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G T      +G+YI   ++ Q+ + +L+  +    +  + DQLL
Sbjct: 177 GQTS-----LGNYIFAGLQTQNWVFVLFGCIAAAALALVVDQLL 215



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 32/226 (14%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLII-IASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +++   + + L  +        RV V  + +      P+ + +  RP + S +   A ++
Sbjct: 3   LLSDPLWSEALGHLPDYLGNHVRVSVAALGLGLATSFPLALIVRTRPVMRSVLLGLASIV 62

Query: 426 AAFPANV------------------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
              P                     +F +  S   +      L   L +   +   +L N
Sbjct: 63  QTVPGLALLALFYPLLLALAALTLTWFGVGFSAFGF------LPAVLALALYSMLPVLRN 116

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G  A      E A    +T  +    + LP   P  + G  TA    W     +   
Sbjct: 117 TITGLQAIDPALTEAAQGVGMTARQSLVMVELPLALPIIMAGIRTAA--VWVIGTATLST 174

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G        LG YI    +  ++  V+ G +      L +++ L
Sbjct: 175 PIGQTS-----LGNYIFAGLQTQNWVFVLFGCIAAAALALVVDQLL 215


>gi|222083053|ref|YP_002542418.1| nitrate/sulfonate/bicarbonate ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221727732|gb|ACM30821.1| nitrate/sulfonate/bicarbonate ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 270

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 72/227 (31%), Gaps = 14/227 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + +  I    +P      V I      L Q  + T    +   +I   F    A L   
Sbjct: 41  AVKVFSIPAYLLPAPSAIGVKIWEARDMLAQNLAWTMAAAVLGFIIGTAFAVSLAILFLY 100

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR     L P    +++IPIL       ++       KV  A +A  F            
Sbjct: 101 SRAAERALFPWAITLKAIPILAIAPLLTIWLGFGLSPKVAIAAIACFF--------PTLV 152

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  + L  + R   E       +  Q F +     ++P +     +S S      + +E 
Sbjct: 153 NTVKGLRTVDRQSLEFLSVIGATKAQTFRHARFYAALPYIFAAAKVSSSTAVIGAIVAE- 211

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                      GIG+ I  A  +QD   +  A++       L   L+
Sbjct: 212 -----FTGANFGIGTVIVTAGYQQDAAMLFSAIVASSVATILMFYLV 253



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 10/260 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             +   + V    F    + L     +   +   W   V   +I          +    +
Sbjct: 4   DLVVSPIQVTIARFVSRLVDLAPAIGLFVSIGFAWETAVKVFSIPAYLLPAPSAIGVKIW 63

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           +    +      TM   V+  II +   + + I   +       + P+A  L A P    
Sbjct: 64  EARDMLAQNLAWTMAAAVLGFIIGTAFAVSLAILFLYSRAAERALFPWAITLKAIPILAI 123

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL+   +  + L+P + ++ +  F   +  L N + G         E  S    T  + 
Sbjct: 124 APLLTIWLG-FGLSPKVAIAAIACF---FPTLVNTVKGLRTVDRQSLEFLSVIGATKAQT 179

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R+       PY    A  +   A   +IV+E            G+G  I  +  +    
Sbjct: 180 FRHARFYAALPYIFAAAKVSSSTAVIGAIVAEF------TGANFGIGTVIVTAGYQQDAA 233

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            +   ++      + +   +
Sbjct: 234 MLFSAIVASSVATILMFYLV 253


>gi|84685042|ref|ZP_01012941.1| ABC transporter permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666774|gb|EAQ13245.1| ABC transporter permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 227

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 14/205 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL    ++T  R + A   ++    V      +      +    + I  +IP +     
Sbjct: 25  GSLIADVTKTLGRAVLAFFAAMTMGVVIGGALGRFAWADGLFGNWILIGLNIPAIVVAIT 84

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++            E A I A+  ++   +  +M + +  +   L E+++ +R+  W+
Sbjct: 85  CYIWLGL--------TEFALILAVVINKTPLVAVNMREGVRALDHGLAELAKVYRVGFWR 136

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +     +P  MP ++      +S  W  V+  E++          G+G  I +  +  D+
Sbjct: 137 RVNKFIIPQLMPYVLTAARTGLSLIWKIVLVFEVLGSDG------GVGFRIGIFFQHFDM 190

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPM 263
             IL   L  + V+ L +  + RP+
Sbjct: 191 KGILAYTLAFMAVVILIEYGVMRPL 215



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 64/192 (33%), Gaps = 10/192 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R V+    A  + + +G  +G           +  +    PA V        +    
Sbjct: 34  TLGRAVLAFFAAMTMGVVIGGALGRFAWADGLFGNWILIGLNIPAIVVAITCYIWLGLT- 92

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 L L ++      +  N+  G  A  +   E+A  + +  WR     I+P + PY
Sbjct: 93  ---EFALILAVVINKTPLVAVNMREGVRALDHGLAELAKVYRVGFWRRVNKFIIPQLMPY 149

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +T A T     W   +V EV           G+G  I    +      ++   L     
Sbjct: 150 VLTAARTGLSLIWKIVLVFEVLG------SDGGVGFRIGIFFQHFDMKGILAYTLAFMAV 203

Query: 566 VLALNRFLWHPL 577
           V+ +   +  PL
Sbjct: 204 VILIEYGVMRPL 215


>gi|110634396|ref|YP_674604.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285380|gb|ABG63439.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 286

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 84/258 (32%), Gaps = 14/258 (5%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            ++R        +      V  +  I    V  G+  G+   ++        ++ ++  +
Sbjct: 21  RLVRLDARTEHARRAVALLVPAVFGITLLVVWEGLVRGLGVPTVLLPPPSMIWERLVNSL 80

Query: 381 WLGCITMFR-----VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                   +     V++   +         I +   P +   + P    ++A P     P
Sbjct: 81  PTLWADFQQTFLKAVLIGYALGCGSGFLAAIAVDRSPFLKRGLLPLGNFVSALPIIGIAP 140

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++V    +   +     + +++  T + +L N + G +A     +++  ++  + W+   
Sbjct: 141 IMVMWFGFDWPSK----AAVVVVMTFFPMLVNTVEGLAASSAIDRDLMRTYAASYWQTLL 196

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P+           A   +IV+E      +     G+G  I+    + +   V
Sbjct: 197 KLRLPAAAPFIFNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNIDMV 251

Query: 556 VLGVLIMCCFVLALNRFL 573
              + I           +
Sbjct: 252 WAEIAIAALAGSLFYGLV 269



 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 94/246 (38%), Gaps = 16/246 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P +F +   V+  G++  L         P  I + +  +L   +L     +T L+ +L
Sbjct: 39  LVPAVFGITLLVVWEGLVRGLGVPTVLLPPPSMIWERLVNSLP--TLWADFQQTFLKAVL 96

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +     F+ A    +S  L   L+P+ + + ++PI+G     V++F   +P K   
Sbjct: 97  IGYALGCGSGFLAAIAVDRSPFLKRGLLPLGNFVSALPIIGIAPIMVMWFGFDWPSKAA- 155

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   +     + M  +  + L        ++ R++  S WQ    L +P + P + 
Sbjct: 156 -------VVVVMTFFPMLVNTVEGLAASSAIDRDLMRTYAASYWQTLLKLRLPAAAPFIF 208

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P+ G+G  I+  +   ++  +   +        
Sbjct: 209 NALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNIDMVWAEIAIAALAGS 263

Query: 254 LYDQLL 259
           L+  L+
Sbjct: 264 LFYGLV 269


>gi|314934872|ref|ZP_07842231.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
 gi|313652802|gb|EFS16565.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
          Length = 215

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 79/208 (37%), Gaps = 15/208 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L +      L  +  ++ + +       L A+  +L   ++ + +I+Q++P++  
Sbjct: 15  TNFGYLWELFVNHLLMSVYGVIFASIVGIPLGILIARFGKLSTPIMTLANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 IF +F   +  +  + Y  +  +  ++++  +   ++
Sbjct: 75  LAILMLSMGLGM--------NTVIFTVFLYALLPIIKNTYTGINGVDANIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P S+  ++  + ++       +V +  +V   + I  P +G  +      
Sbjct: 127 RNQVLRMIELPLSLSVIIGGIRIA-------LVVAIGVVAIGSFIGAPTLGDIVIRGTNA 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            D    + A    + +I +   ++ R +
Sbjct: 180 TDGTLYILAGAIPIVIIVVLIDVILRLL 207



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 4/161 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + H+   +  Y+  L    +   V  +I ASI+ IP+GI I     +S+ I   A ++  
Sbjct: 9   LGHYYQTNFGYLWELFVNHLLMSVYGVIFASIVGIPLGILIARFGKLSTPIMTLANIIQT 68

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P      +++  +          +   +       I+ N   G +    + K+      
Sbjct: 69  VPVIAMLAILMLSMGLGMNT----VIFTVFLYALLPIIKNTYTGINGVDANIKDAGKGMG 124

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +T  +  R I LP      + G   A   A     +     
Sbjct: 125 MTRNQVLRMIELPLSLSVIIGGIRIALVVAIGVVAIGSFIG 165


>gi|317048192|ref|YP_004115840.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949809|gb|ADU69284.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 238

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 84/244 (34%), Gaps = 21/244 (8%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +Q  S  R + +  +    VV  +  G+   ++            + +I+LG   +F V 
Sbjct: 1   MQNASLARRTGLAVLAIVLVVGLLVWGLGLDTLR--------ARKVDLIYLGQQHLFLVF 52

Query: 392 VLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
             +  A ++ IP GI +        +  +     +    P      L +  V        
Sbjct: 53  WSMFFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLALAMVIVGIGDR--- 109

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               + +   +   I+ N  AG SA P    E A+   +T ++  R + +P   P  + G
Sbjct: 110 -PALIALFLASLLPIVRNTYAGLSAVPPSLLEAANGIGMTKFQRLRQVEIPNALPVILAG 168

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++ +          +  G  I        FP ++LG +    F L L
Sbjct: 169 VRIATAINVGTAPLAFLIG-------ASSYGELIFPGIYLNDFPTLILGAVATALFALIL 221

Query: 570 NRFL 573
           +  L
Sbjct: 222 DMLL 225



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 73/201 (36%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    +  +M  +LL       L ++   RR    ++ I ++  ++P L  L  
Sbjct: 40  LIYLGQQHLFLVFWSMFFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V                A+ A+F + +  +  + Y  L  +P  L E +    ++ +Q
Sbjct: 100 AMVIVGIGDRP--------ALIALFLASLLPIVRNTYAGLSAVPPSLLEAANGIGMTKFQ 151

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P ++P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 152 RLRQVEIPNALPVILAGVRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDF 204

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++   +       + D LL
Sbjct: 205 PTLILGAVATALFALILDMLL 225


>gi|326388679|ref|ZP_08210272.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206930|gb|EGD57754.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium nitrogenifigens DSM 19370]
          Length = 272

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 21/216 (9%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           ++  +  +     +  T P  +   +       +L      +  R+ + + ++     V 
Sbjct: 45  VLPTLSAMAAQAWRLATEPDPVTGQI-------TLLADTLASLTRLGAGLALATGTALVL 97

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             +         VL P++ ++  IP +  L    +             E A +  I    
Sbjct: 98  GLVLGVVPLARAVLGPVITLIAVIPPIAVLPILFIALGLG--------EAAKVALIAIGI 149

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              MT  +   +  +P +    +++   + WQ    + +P  MP L   +  SM   W F
Sbjct: 150 APYMTRDLAAYVAGLPPEQFVKAQTLGANSWQVAIRVALPQMMPRLFETLRFSMGPAWVF 209

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           ++A+E I          G+G  I L  +   +  IL
Sbjct: 210 LIAAEAIA------SDVGLGYRIFLVRRYLAMDIIL 239



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 10/212 (4%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           V      +A Q+             + ++     ++ R+   + +A+   + +G+ +G  
Sbjct: 45  VLPTLSAMAAQAWRLATEPDPVTGQITLLADTLASLTRLGAGLALATGTALVLGLVLGVV 104

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P   + + P   L+A  P     P++   +             L+  G   Y+  ++ A 
Sbjct: 105 PLARAVLGPVITLIAVIPPIAVLPILFIALGLGEA----AKVALIAIGIAPYMTRDLAAY 160

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +  P +    A +     W+    + LP + P        + G AW   I +E  +   
Sbjct: 161 VAGLPPEQFVKAQTLGANSWQVAIRVALPQMMPRLFETLRFSMGPAWVFLIAAEAIA--- 217

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                 GLG  I       +   ++  V  + 
Sbjct: 218 ---SDVGLGYRIFLVRRYLAMDIILPYVAWIS 246


>gi|300867559|ref|ZP_07112209.1| permease protein of ABC transporter [Oscillatoria sp. PCC 6506]
 gi|300334447|emb|CBN57379.1| permease protein of ABC transporter [Oscillatoria sp. PCC 6506]
          Length = 212

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + Q+     + +  ++ +++L       L  +       ++   ++MQ+IP L     
Sbjct: 10  SEMIQHTIEHLILVSISIFVAVLIGIPLGILVTRKPEFSQPILGFANVMQTIPSLAL--- 66

Query: 119 TVVYFMNLYPGKVIGAELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               F  L P  V+G   A  AI A+    +  +  + Y  +  +   + E  R   ++ 
Sbjct: 67  ----FGLLIPVPVVGGIGARTAIIALTLYSLMPIIRNTYTGIIGVDPAIREAGRGMGMTD 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMS 199
           WQ  + + +P +M  ++  + ++
Sbjct: 123 WQLLFQVEIPLAMSVILAGIRVA 145



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + I +A +I IP+GI +  +P  S  I  FA ++   P+   F L++       +
Sbjct: 20  LILVSISIFVAVLIGIPLGILVTRKPEFSQPILGFANVMQTIPSLALFGLLIPVPVVGGI 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +  L ++ +   I+ N   G        +E      +T W+    + +P      
Sbjct: 80  GARTAIIALTLY-SLMPIIRNTYTGIIGVDPAIREAGRGMGMTDWQLLFQVEIPLAMSVI 138

Query: 507 VTGAITA 513
           + G   A
Sbjct: 139 LAGIRVA 145


>gi|170697510|ref|ZP_02888600.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170137533|gb|EDT05771.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 255

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 18/248 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P      A + ++ ++ +    +Q    P    +  P+  D  SL          + 
Sbjct: 12  RRLPAYIARAAALTLLLVLLLRPAWLQGVFAPFAD-NGAPVIYDRASLLDLTLAHLGTVA 70

Query: 74  SAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            + +I +L          +        V   ++DI Q+ P +  L   V           
Sbjct: 71  LSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPAVGFGL---- 126

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  + A+    +  +  S    L ++PRD+ + +R   +SGWQ+   + +P + P 
Sbjct: 127 ----KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAARGMGMSGWQQLVSVELPLAFPV 182

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  + ++       VV +       + +   G+G  I   ++  +   +L   + +  +
Sbjct: 183 IVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSNTAFVLQGGVIVGLL 235

Query: 252 IFLYDQLL 259
             L    +
Sbjct: 236 AVLVSDAI 243



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I  +I I  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGMLIAIAAGIAV-TRPAGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|13477070|ref|NP_108641.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027834|dbj|BAB54427.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 251

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 78/226 (34%), Gaps = 10/226 (4%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L + W  ++  + +          ++    ++   ++     T+   +   +I ++  + 
Sbjct: 22  LLLAWQYLLPLLGVPAYIVPTPTAISGVFQRNFALLMDNLRPTLIEALAGFVIGNLAAVL 81

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + +       + +   P        P     P+++       + P + ++ ++ F   + 
Sbjct: 82  LAVLFVHNRILQATYFPIVLFFNTIPILALSPIIILIFGLG-MTPKIVIAAVICF---FP 137

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            L N+I G  +  ++  E+      T    +  + LP   P   +    A   A   +IV
Sbjct: 138 TLVNMIRGLDSASDNEHELFRVLSATRAEIFWSLRLPRALPMLFSSLRIASATAVIGAIV 197

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E            GLGA I +++       +   +++  C  + L
Sbjct: 198 GEWIGSDK------GLGALIIQASFNYQSDRLYAAIVLSSCLSIVL 237



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 18/252 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +F   + +L    + + L G+    VP           +   L      T +  L+  V
Sbjct: 15  PVFGAASLLLAWQYL-LPLLGVPAYIVPTPTAISGVFQRNFALLMDNLRPTLIEALAGFV 73

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I  L   + A L   +R L     PI+    +IPIL      ++ F      K++ A + 
Sbjct: 74  IGNLAAVLLAVLFVHNRILQATYFPIVLFFNTIPILALSPIIILIFGLGMTPKIVIAAVI 133

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F            +M + L +   +  E+ R    +  + FW L +P ++P L  ++ 
Sbjct: 134 CFF--------PTLVNMIRGLDSASDNEHELFRVLSATRAEIFWSLRLPRALPMLFSSLR 185

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFL 254
           ++ +       A    +VG+ +    G+G+ I  A        +  A++    +  V+F 
Sbjct: 186 IASA------TAVIGAIVGEWIGSDKGLGALIIQASFNYQSDRLYAAIVLSSCLSIVLFC 239

Query: 255 YDQLLFRPMIVW 266
              L+ R +I +
Sbjct: 240 AVVLVERRVIKY 251


>gi|89067336|ref|ZP_01154849.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Oceanicola granulosus HTCC2516]
 gi|89046905|gb|EAR52959.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Oceanicola granulosus HTCC2516]
          Length = 281

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 91/241 (37%), Gaps = 17/241 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +R   P +F L   VL  G++            P ++     I      L +   +T L+
Sbjct: 31  ARVAVPVLFGLALLVLWEGLVRFFEVPGVILPPPSEVW--AAIQRSPDLLWEDFRQTVLK 88

Query: 72  -MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             LS  +I     F+ A L  +S  L   L+PI + + ++PI+G     V ++   +  K
Sbjct: 89  GALSGYLIGCGAAFLTAILIDRSPFLTKGLLPIGNFVAALPIVGIAPILVSWYGFDWHSK 148

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                +   F +          +  Q L        ++ R++  S WQ    L +P +MP
Sbjct: 149 AAVVVVMVFFPVL--------INAVQGLRESDTMQRDLMRTYGASYWQTLLKLRLPAAMP 200

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L   + ++ +      + +E         P  G+G  I+  +    +  + +A + +  
Sbjct: 201 FLFNGLKIASTLALIGAIVAEYFGS-----PTRGMGFRISTGVGRLSIDLV-WAEIAVAA 254

Query: 251 V 251
           V
Sbjct: 255 V 255



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 80/269 (29%), Gaps = 14/269 (5%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            S L      L      I          L +   V  +  +    +  G+        + 
Sbjct: 1   MSLLLALGFWLGAWGANIAIANSRWRRSLPARVAVPVLFGLALLVLWEGLVRFFEVPGVI 60

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVV-----LIIIASIIWIPVGIWIGFRPHISSKIQP 420
                  +  +     L      + V+       +I         I I   P ++  + P
Sbjct: 61  LPPPSEVWAAIQRSPDLLWEDFRQTVLKGALSGYLIGCGAAFLTAILIDRSPFLTKGLLP 120

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               +AA P     P++VS   +   +    + +++ F      L N + G        +
Sbjct: 121 IGNFVAALPIVGIAPILVSWYGFDWHSKAAVVVVMVFFPV----LINAVQGLRESDTMQR 176

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           ++  ++  + W+    + LP   P+   G   A   A   +IV+E          T G+G
Sbjct: 177 DLMRTYGASYWQTLLKLRLPAAMPFLFNGLKIASTLALIGAIVAEYFGS-----PTRGMG 231

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I+    + S   V   + +        
Sbjct: 232 FRISTGVGRLSIDLVWAEIAVAAVAGTVF 260


>gi|76787433|ref|YP_328968.1| quaternary amine ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798141|ref|ZP_00780394.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|77411461|ref|ZP_00787806.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|76562490|gb|ABA45074.1| quaternary amine uptake (QAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586500|gb|EAO63005.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|77162464|gb|EAO73430.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
          Length = 216

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 72/186 (38%), Gaps = 15/186 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +         A+  ++   ++ I +++Q+IP L  ++  ++             
Sbjct: 35  GVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLGI------- 87

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +  +F   +  +  + Y  + N+  DL + ++   ++  Q+ + + +P S+  ++ 
Sbjct: 88  -KTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVIMA 146

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          +V +  I      +   G+G  I       +  AI+ A      ++ +
Sbjct: 147 GLR-------NALVVAIGITAIGAFVGGGGLGDIIIRGTNATNGGAIILAGSLPTALMAI 199

Query: 255 YDQLLF 260
           +  L+ 
Sbjct: 200 FSDLIL 205



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 4/141 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               V  +I+A+I+ IP+GI+I  R  I + +   A ++   P+     +++  +     
Sbjct: 29  FLISVYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLG-- 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   I+ N   G     +D  + A    +T  +    + LP      
Sbjct: 87  --IKTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVI 144

Query: 507 VTGAITACGGAWNASIVSEVA 527
           + G   A   A   + +    
Sbjct: 145 MAGLRNALVVAIGITAIGAFV 165


>gi|254454526|ref|ZP_05067963.1| ABC transporter, permease protein [Octadecabacter antarcticus 238]
 gi|198268932|gb|EDY93202.1| ABC transporter, permease protein [Octadecabacter antarcticus 238]
          Length = 309

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 77/237 (32%), Gaps = 9/237 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               L   +    L    +  +               SL  +   T    L   VI    
Sbjct: 65  AIIPLTYTLTRPRLPSPHQVAIEMYETIFTKAPTSRRSLVYHGWVTLSATLLGFVIGTTL 124

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A     +R +   ++P     Q+IPIL      +V    +    ++   + + +  
Sbjct: 125 GVLLAVGIVYNRTMDKSVMPWAITSQTIPILALAPMIIVMLGAIGIQGLLPKSIISAYLS 184

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +   M + L +      ++ R++  +  Q FW L +P SMP L  ++ + +S 
Sbjct: 185 F----FPVVVGMVKGLRSPDGMQLDLLRTYSANANQGFWKLRLPASMPYLFASLKIGISA 240

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +  E+           G G+ + +  +    +    A+        L   +L
Sbjct: 241 ALVGAIVGELPTGARA-----GFGARMLVGDQYGQPMVTWAALFGAAITAALLVAIL 292



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 75/208 (36%), Gaps = 9/208 (4%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++  +I + + + + + I +   +   + P+A      P     P++
Sbjct: 102 SLVYHGWVTLSATLLGFVIGTTLGVLLAVGIVYNRTMDKSVMPWAITSQTIPILALAPMI 161

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  S++  + + + ++  ++ G  +      ++  ++     + +  +
Sbjct: 162 IVMLGAIGIQGLLPKSIISAYLSFFPVVVGMVKGLRSPDGMQLDLLRTYSANANQGFWKL 221

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS----FP 553
            LP   PY           A   +IV E+ +         G GA +    + G     + 
Sbjct: 222 RLPASMPYLFASLKIGISAALVGAIVGELPTGAR-----AGFGARMLVGDQYGQPMVTWA 276

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            +    +     V  L+      L   G
Sbjct: 277 ALFGAAITAALLVAILSWIERRTLTRMG 304


>gi|25010306|ref|NP_734701.1| hypothetical protein gbs0232 [Streptococcus agalactiae NEM316]
 gi|77408830|ref|ZP_00785558.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77413720|ref|ZP_00789902.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|23094658|emb|CAD45877.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160211|gb|EAO71340.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77172561|gb|EAO75702.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 216

 Score = 70.3 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 76/202 (37%), Gaps = 15/202 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +      L  +  ++++ +         A+  ++   ++ I +++Q+IP L  ++ 
Sbjct: 19  SYILEQFIHHFLISIYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISI 78

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++                 +  +F   +  +  + Y  + N+  DL + ++   ++  Q
Sbjct: 79  IMLGLGLGI--------KTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQ 130

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + + + +P S+  ++  +          +V +  I      +   G+G  I       + 
Sbjct: 131 RLFMVELPLSISVIMAGLR-------NALVVAIGITAIGAFVGGGGLGDIIIRGTNATNG 183

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
            AI+ A      ++ ++  L+ 
Sbjct: 184 GAIILAGSLPTALMAIFSDLIL 205



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 4/141 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               +  +I+A+I+ IP+GI+I  R  I + +   A ++   P+     +++  +     
Sbjct: 29  FLISIYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLG-- 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   I+ N   G     +D  + A    +T  +    + LP      
Sbjct: 87  --IKTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVI 144

Query: 507 VTGAITACGGAWNASIVSEVA 527
           + G   A   A   + +    
Sbjct: 145 MAGLRNALVVAIGITAIGAFV 165


>gi|324113370|gb|EGC07345.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 236

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           VL    I +L+  I    V  + +    +      L     +    + +++  +LL    
Sbjct: 9   VLGFTFIVLLVMAILTWGVGLETLKARQVD-----LIYLGQQHLFLVFTSLFFALLIGVP 63

Query: 86  YATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              L ++   R      + I ++  ++P L  L   ++             +  AI A+F
Sbjct: 64  SGILLSRPAARGFAEHAMQIFNVGNTLPPLAVLALAMIILGIG--------DTPAIVALF 115

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +  +  + Y  L  +P  L+E ++   ++ WQ+ + + +P + P ++  + ++    
Sbjct: 116 LASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLVELPNAWPVMLSGIRIA--AA 173

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                A    ++G +       G  I   I   D   ++           + D LL
Sbjct: 174 IIVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDSLL 224



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+       P      
Sbjct: 39  LIYLGQQHLFLVFTSLFFALLIGVPSGILL-SRPAARGFAEHAMQIFNVGNTLPPLAVLA 97

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +            + +   +   I+ N  AG +A P   KE A    +T W+   
Sbjct: 98  LAMIILGIGDT----PAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLY 153

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  ++G   A       + ++ +          +  G  I        FP +
Sbjct: 154 LVELPNAWPVMLSGIRIAAAIIVGTAPLAFLIG-------ASSYGELIFPGIYLNDFPTL 206

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LG      F L L+  L
Sbjct: 207 ILGATATALFALILDSLL 224


>gi|213609282|ref|ZP_03369108.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 247

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 39  LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 98

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 99  GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 158

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +   +   
Sbjct: 159 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSS 211

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 212 AIDLVLLGVIPVIALAVVIDALF 234



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++    
Sbjct: 43  LMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVK 102

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+AG +  P D  E A +  ++  + +
Sbjct: 103 QFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRF 162

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++ LP   P ++             ++ + +   G       G GA + +     +   
Sbjct: 163 RHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDL 215

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 216 VLLGVIPVIALAVVIDALF 234


>gi|197106165|ref|YP_002131542.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
 gi|196479585|gb|ACG79113.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
          Length = 255

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 5/159 (3%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              I+P A ++   P     PLV+      H  P   L  L +    + I     AG  +
Sbjct: 88  DRAIRPLASVVQVTPVVALAPLVLIWAGLDH--PGRALVALAVVVAFFPIFSGAAAGLRS 145

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D + +   +  + W+    + LP   P+ + G     G +   ++V+E  +      
Sbjct: 146 ADPDLERLFDLYGASRWQRVTRLRLPAAVPFLLEGHKVGAGLSLIGAVVAEFGAGSGGGG 205

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               L   I ++  K     ++  ++++    + L+  L
Sbjct: 206 G---LAWQILDAGNKLQTDRMIAALVLLGLMGVVLHALL 241



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 9/201 (4%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L + A +T    L A+  + L     A L A S  L   + P+  ++Q  P++      +
Sbjct: 52  LFRAAWQTLWVALVALAGASLIAQALALLTALSPLLDRAIRPLASVVQVTPVVALAPLVL 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++    +PG+ + A             + +       L +   DLE +   +  S WQ+ 
Sbjct: 112 IWAGLDHPGRALVALAVV------VAFFPIFSGAAAGLRSADPDLERLFDLYGASRWQRV 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             L +P ++P L+    +         V +E          L      I  A  +     
Sbjct: 166 TRLRLPAAVPFLLEGHKVGAGLSLIGAVVAEFGAGSGGGGGLA---WQILDAGNKLQTDR 222

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           ++ A++ +  +  +   LL R
Sbjct: 223 MIAALVLLGLMGVVLHALLER 243


>gi|315644670|ref|ZP_07897801.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus vortex V453]
 gi|315279929|gb|EFU43228.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus vortex V453]
          Length = 320

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 89/209 (42%), Gaps = 12/209 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----L 116
           +    + T+L ML ++ IS++     A +    + L  +L P+LD++  IP + +    L
Sbjct: 98  ILGTLALTSLTMLISIPISVIIAVFLAEMT--PKWLRNLLRPVLDLLVGIPSVVYGFLGL 155

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           T  + +  NL    +    LAA   +    +  ++     ++  +P    + + +   + 
Sbjct: 156 TLLIPWLRNLSGHDLADGLLAASIVLTIMVLPTISRISDDAISAVPNKYRDAAYALGANR 215

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIA 230
           +Q  + + +P +  G+++ +++ M+      +A  M++     +      P   + S I 
Sbjct: 216 FQTVFRVVLPAARSGIMYAVILGMARAIGETMAVVMVIGNTAQLPNSLFTPTAVLTSNIV 275

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           + I   +  +     L M+G I L   LL
Sbjct: 276 MQISSVEFDSTWNYGLYMMGFILLAISLL 304



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 65/173 (37%), Gaps = 10/173 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y  + +++    +T   +++ I I+ II + +         + + ++P   LL   P+ V
Sbjct: 92  YGALTFILGTLALTSLTMLISIPISVIIAVFLAEM--TPKWLRNLLRPVLDLLVGIPSVV 149

Query: 433 F----FPLVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVAS 484
           +      L++  +   S + L   L  + +++       +  +     SA PN +++ A 
Sbjct: 150 YGFLGLTLLIPWLRNLSGHDLADGLLAASIVLTIMVLPTISRISDDAISAVPNKYRDAAY 209

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +     ++    ++LP      +   I     A   ++   +       L  +
Sbjct: 210 ALGANRFQTVFRVVLPAARSGIMYAVILGMARAIGETMAVVMVIGNTAQLPNS 262


>gi|149002789|ref|ZP_01827715.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|147759083|gb|EDK66077.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS69]
          Length = 305

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 17/217 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-------TLDVHSLPQYASRTTLRMLS 74
                L++ ++ ++L  + +  +    V+ V I       T +  S    A    L    
Sbjct: 28  FACLSLIVILVAMILVFVAQKGLSTFFVNGVNIFDFLLGGTWNPSSKEFGALPMILGSFI 87

Query: 75  AMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
             ++S L    +A  AA      S +   +L P ++++  IP + +    L   V +  +
Sbjct: 88  VTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGFIGLQIVVPFVRS 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++ G   G  L+ I  +F   +  +TF    SL  +PR   E S +   + WQ  W + +
Sbjct: 148 VFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREASFAMGATRWQTIWRVIL 206

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 207 KAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P V S            +S+L +      + F       A P  ++E + +  
Sbjct: 136 IGLQIVVPFVRSVFGGTGFGILSGISVLFVMI-LPTVTFMTTDSLRAVPRYYREASFAMG 194

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            T W+    +IL        T  +     A+  ++  ++       + T+
Sbjct: 195 ATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|163848089|ref|YP_001636133.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222525983|ref|YP_002570454.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
 gi|163669378|gb|ABY35744.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aurantiacus J-10-fl]
 gi|222449862|gb|ACM54128.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus sp. Y-400-fl]
          Length = 262

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 15/215 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           LL   LVIG+   L        +      ++   L     L  +   T    L  + I +
Sbjct: 24  LLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQPEVRLIYHTGATASAALLGLAIGI 83

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                 A      R L   L P + + QS+P +       ++  +    +   A L A F
Sbjct: 84  CIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAPLLTIWLGDGIAPRAAMAALFASF 143

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  +    L     +   + +++  S WQ    L +P ++P +   + ++ 
Sbjct: 144 --------PLLIATISGLRRPAPEQLAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAG 195

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           +      +  E+   G       G+G  I  +   
Sbjct: 196 ALAVIGALVGELAGAG------RGLGYLITTSTYR 224



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 78/225 (34%), Gaps = 12/225 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             L       V+ ++ + W     G+   +       I      +  + +I+    T   
Sbjct: 17  RRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQPE--VRLIYHTGATASA 74

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            ++ + I   I + + I   F   +   + P+  L  + P+    PL+   +        
Sbjct: 75  ALLGLAIGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAPLLTIWLGDGIAPRA 134

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              +L       + +L   I+G      +   +  ++  + W+  R + LP   P+  +G
Sbjct: 135 AMAALF----ASFPLLIATISGLRRPAPEQLAMMQAYGASQWQILRMLRLPAALPFIFSG 190

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
              A   A   ++V E+A  G       GLG  I  ST + +   
Sbjct: 191 LRVAGALAVIGALVGELAGAG------RGLGYLITTSTYRLATDR 229


>gi|159184204|ref|NP_353230.2| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Agrobacterium tumefaciens
           str. C58]
 gi|159139534|gb|AAK86015.2| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Agrobacterium tumefaciens
           str. C58]
          Length = 246

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 21/233 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F+    I   +   + +   P         +L +  L   A  T L  L+A  +++L 
Sbjct: 18  IIFLAAPQIFAPIFRPLVQANAPAIYTQANLFSLTLSHLTIVAIATGLATLTAGALAVLV 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           T  +            +   I++I Q+ P +  L   V              E   + A+
Sbjct: 78  TRPFGA------DFLPLSRSIVNIGQTFPPVAVLALAVPMIG--------FGEKPTLIAL 123

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +  +  +    L  +P  + + +R   ++GWQ+   + +P ++P ++  + +S   
Sbjct: 124 FLYALLPVFENTLTGLTTLPATVMDAARGSGMTGWQRLTKVELPLALPAILAGVRLS--- 180

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                V S       + +    +G  I   ++  +L  IL   L +  +  L 
Sbjct: 181 ----AVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAALAILI 229



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 66/194 (34%), Gaps = 15/194 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFFP 435
           +  L    +  V +   +A++    + + +  RP  +  +   +    +   FP      
Sbjct: 48  LFSLTLSHLTIVAIATGLATLTAGALAVLV-TRPFGADFLPLSRSIVNIGQTFPPVAVLA 106

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L V  + +      + L L  +      +  N + G +  P    + A    +TGW+   
Sbjct: 107 LAVPMIGFGEKPTLIALFLYALL----PVFENTLTGLTTLPATVMDAARGSGMTGWQRLT 162

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  + G   +        ++S   +     +    LG  I    +  +   +
Sbjct: 163 KVELPLALPAILAGVRLSA-------VISLSTATIGSTVAARTLGEVIIAGLQSNNLAFI 215

Query: 556 VLGVLIMCCFVLAL 569
           + G LI+    + +
Sbjct: 216 LQGGLIVAALAILI 229


>gi|260464303|ref|ZP_05812495.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259029927|gb|EEW31211.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 292

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL   A  T    L           + A        L   L+P +   Q+IPIL  
Sbjct: 82  TSNRSLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHMATLDRSLMPWIIASQTIPILAV 141

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    +I   + + +  F    + +T  M + L +      ++  ++  S
Sbjct: 142 APMIIVVLAAVGITGLIPKAMISTYLSF----FPVTVGMVKGLRSPEIMHLDLMHTYNAS 197

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L VP S+P L  +M ++++      +  E+         + GIG+ +      
Sbjct: 198 ASQTFWKLRVPASVPFLFTSMKVAVAASLVGAIVGEL-----PTGAVAGIGAKLLAGAYY 252

Query: 236 QDLLAILYAMLTMLGVIFLY 255
              + I  A++    V  L 
Sbjct: 253 SQSIDIWSALVAGSIVAALL 272



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 78/193 (40%), Gaps = 3/193 (1%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++     + + I + + I     +   + P+       P     P++
Sbjct: 86  SLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHMATLDRSLMPWIIASQTIPILAVAPMI 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   +  +++  + + + +   ++ G  +      ++  +++ +  + +  +
Sbjct: 146 IVVLAAVGITGLIPKAMISTYLSFFPVTVGMVKGLRSPEIMHLDLMHTYNASASQTFWKL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGSFPEVV 556
            +P   P+  T    A   +   +IV E+ +     +    L GAY ++S +   +  +V
Sbjct: 206 RVPASVPFLFTSMKVAVAASLVGAIVGELPTGAVAGIGAKLLAGAYYSQSIDI--WSALV 263

Query: 557 LGVLIMCCFVLAL 569
            G ++    V+ +
Sbjct: 264 AGSIVAALLVMVV 276


>gi|119387607|ref|YP_918641.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378182|gb|ABL72945.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 216

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 81/208 (38%), Gaps = 10/208 (4%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +   + + A      +  A+ +++L          ++RR+   ++ +  I+ +IP +
Sbjct: 7   IANNWPVILRLAGEHISIVAVAVGLAILTGVPIGIAITQNRRVADGVLYVASIIVTIPSI 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +     +  G      L A+ AI       +  + Y ++ N+   L E +    
Sbjct: 67  ALFGLMIPILSKIGQGIGW---LPAVIAILLYSQLPIVRNTYTAITNVDPALREAAIGMG 123

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++ +Q+   L +P ++P ++  +  +       VV +  +      I   G+G  IA  I
Sbjct: 124 MTPFQRLTRLEIPIAIPVIMAGVRTA-------VVMNIGVAAIAAYIGAGGLGVLIARGI 176

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            + D   ++   L +  +  L D  L +
Sbjct: 177 SQTDPRQLITGALAVSLLAILADWALLQ 204



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 75/197 (38%), Gaps = 8/197 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   ++ L    +  V V + +A +  +P+GI I     ++  +   A ++   P+   F
Sbjct: 10  NWPVILRLAGEHISIVAVAVGLAILTGVPIGIAITQNRRVADGVLYVASIIVTIPSIALF 69

Query: 435 PLVVSCVSYYHLNPNLW-LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            L++  +S            + ++  +Q  I+ N     +      +E A    +T ++ 
Sbjct: 70  GLMIPILSKIGQGIGWLPAVIAILLYSQLPIVRNTYTAITNVDPALREAAIGMGMTPFQR 129

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + +P   P  + G  TA        +++   +    ++   GLG  IA    +    
Sbjct: 130 LTRLEIPIAIPVIMAGVRTA-------VVMNIGVAAIAAYIGAGGLGVLIARGISQTDPR 182

Query: 554 EVVLGVLIMCCFVLALN 570
           +++ G L +    +  +
Sbjct: 183 QLITGALAVSLLAILAD 199


>gi|307944598|ref|ZP_07659938.1| putative ABC transporter permease protein [Roseibium sp. TrichSKD4]
 gi|307772347|gb|EFO31568.1| putative ABC transporter permease protein [Roseibium sp. TrichSKD4]
          Length = 276

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++A+ T    +   ++ +    + A            L+P++ I Q++P+       V
Sbjct: 78  LLEHAAITAQETVLGFILGVFAGTLIAVAMWLFPLARRGLLPMILITQALPVFAIAPILV 137

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   FA+ ++         Y  L        ++++ +R+  W++ 
Sbjct: 138 LWLGFGLASKIVMAVLVIFFAVTST--------FYDGLRRADPGYSDLAKLYRVGRWKEL 189

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            Y   P ++  L   + ++       V A    +VG+ V    G+   +  +        
Sbjct: 190 IYFRFPAALSALASGIRIA------AVFAPIGAIVGEWVGAKGGLAFIMLQSNARMQTDM 243

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +  A++ +  ++      + R
Sbjct: 244 MFAALILLALMVLTLRYTVER 264



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +++    IT    V+  I+       + + +   P     + P   +  A P     P+
Sbjct: 76  WFLLEHAAITAQETVLGFILGVFAGTLIAVAMWLFPLARRGLLPMILITQALPVFAIAPI 135

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  + +   +  +   L++ F     +      G       + ++A  + +  W+   Y
Sbjct: 136 LVLWLGFGLASKIVMAVLVIFFA----VTSTFYDGLRRADPGYSDLAKLYRVGRWKELIY 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
              P       +G   A   A   +IV E            GL   + +S  +     + 
Sbjct: 192 FRFPAALSALASGIRIAAVFAPIGAIVGEWVG------AKGGLAFIMLQSNARMQTDMMF 245

Query: 557 LGVLIMCCFVLAL 569
             ++++   VL L
Sbjct: 246 AALILLALMVLTL 258


>gi|332161038|ref|YP_004297615.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665268|gb|ADZ41912.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330859441|emb|CBX69786.1| putative osmoprotectant uptake system permease protein yehW
           [Yersinia enterocolitica W22703]
          Length = 276

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 23/252 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +L   +  +   G   + +  D+   + +     SL          +L + +I++ 
Sbjct: 33  WALLLLAGLVFGMTSLGGFFSALFPDLDRPIYVQDTFWSL---VVAHVFLVLISSIIAVF 89

Query: 82  FTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                     +        V+  I+ + Q+ P +  L   V             +E  AI
Sbjct: 90  IGVSAGVAVTRPAGEEFRSVVETIVAMGQTFPPVAVLAIAVPVMG--------FSEKPAI 141

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    +  +       + ++ RD+ EV+    +S  Q  W + +P + P +V  +  S
Sbjct: 142 IALVLYGLLPILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPVIVAGIRTS 201

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +        A+    VG        +GS I + +   +   ++   + +  +  + D + 
Sbjct: 202 VII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIF 254

Query: 260 F---RPMIVWSN 268
               R +  W  
Sbjct: 255 TRWNRRLSRWRE 266



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +   ++ G+  G+      +          +YV       +   V L++I+SII + +G+
Sbjct: 33  WALLLLAGLVFGMTSLGGFFSALFPDLDRPIYVQDTFWSLVVAHVFLVLISSIIAVFIGV 92

Query: 407 WIGFRPH------ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             G            S ++    +   FP      + V  + +      + L L  +   
Sbjct: 93  SAGVAVTRPAGEEFRSVVETIVAMGQTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL-- 150

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   I G  +   D +EVA+   ++  +    + LP   P  V G  T+       
Sbjct: 151 --PILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPVIVAGIRTSVIINIGT 208

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPL 577
           + ++         + T  LG+ I       +   V+ G +++    +  +     W   L
Sbjct: 209 AAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIFTRWNRRL 261

Query: 578 YLYGT 582
             +  
Sbjct: 262 SRWRE 266


>gi|307244628|ref|ZP_07526732.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492009|gb|EFM64058.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 249

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 94/246 (38%), Gaps = 21/246 (8%)

Query: 336 SNQRVSYMLDIFWFCVVCGVA--------IGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
            N ++  +   FW  +   V+        +     ++  + +     D    +W    + 
Sbjct: 4   RNSKLYILAIAFWLSIWQLVSSLMGQEILLVSPLSALSRLGHLSLEADFWKTVWY---SF 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
            ++ +   +A I+ I + +           IQP    + A P   F  L +  VS    N
Sbjct: 61  SKISLGFFLAFILGIGMALLGANFRAFRVLIQPLMATIQAIPVVSFIILCLIWVS--SRN 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            ++ +S L++      I  NV+ G  +  + F ++A  F +   +  RYI L  ++P+  
Sbjct: 119 LSVLISFLLVLPI---IYTNVLTGIDSIDSSFMDLAKVFKMKRSKIIRYIYLSEVYPHLK 175

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +    + G  W + I +EV    ++      +G  + ++    S  ++    L++    +
Sbjct: 176 SATYVSLGLCWKSGIAAEVIGMPNMS-----IGEKLYQAKIYLSTGDLFAWTLVIIVLSV 230

Query: 568 ALNRFL 573
           A  +  
Sbjct: 231 AFRKVF 236



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 84/228 (36%), Gaps = 14/228 (6%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +++ L+        P   +  +          +    +  ++     ++ +     A
Sbjct: 19  IWQLVSSLMGQEILLVSPLSALSRLGHLSLEADFWKTVWYSFSKISLGFFLAFILGIGMA 78

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L A  R   +++ P++  +Q+IP++ F+   +++  +            ++   F   +
Sbjct: 79  LLGANFRAFRVLIQPLMATIQAIPVVSFIILCLIWVSSRN---------LSVLISFLLVL 129

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  ++   + +I     ++++ F++   +   Y+ +    P L     +S+   W   
Sbjct: 130 PIIYTNVLTGIDSIDSSFMDLAKVFKMKRSKIIRYIYLSEVYPHLKSATYVSLGLCWKSG 189

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +A+E+I + +       IG  +  A        +    L ++ +   +
Sbjct: 190 IAAEVIGMPNMS-----IGEKLYQAKIYLSTGDLFAWTLVIIVLSVAF 232


>gi|145219802|ref|YP_001130511.1| phosphate ABC transporter, inner membrane subunit PstA
           [Prosthecochloris vibrioformis DSM 265]
 gi|145205966|gb|ABP37009.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Chlorobium phaeovibrioides DSM 265]
          Length = 448

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 8/154 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       K      +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGVIAAVYFTEYAKEGFFTSILRSANSTLAGVPSIVFGLFGLAFFINTMKVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++ ++P+  +E S     + W     + +P ++PG
Sbjct: 293 SKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASLGLGSTKWNTIATVILPAALPG 352

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           ++   ++S+        A  +     +V    GI
Sbjct: 353 IITGGIISLGRA-AGETAPIIFTAAVSVGSAIGI 385



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 52/156 (33%), Gaps = 16/156 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSY 443
             L I A +   P+G+         +K   F  +L +        P+ V F L       
Sbjct: 227 FFLAIGAMLFAFPLGVIAAVYFTEYAKEGFFTSILRSANSTLAGVPSIV-FGLFGLAFFI 285

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYII 498
             +  +   S+L    T   ++   I         + P  +KE +     T W     +I
Sbjct: 286 NTMKVSESKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASLGLGSTKWNTIATVI 345

Query: 499 LPGIFPYYVTGAITACGGAWNA---SIVSEVASWGH 531
           LP   P  +TG I + G A       I +   S G 
Sbjct: 346 LPAALPGIITGGIISLGRAAGETAPIIFTAAVSVGS 381


>gi|317177351|dbj|BAJ55140.1| osmoprotection protein [Helicobacter pylori F16]
          Length = 518

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  +  + L+F  +   L   + +    L+PI++ + +IP L      +           
Sbjct: 29  VALSSFLVLVFGVLIGVLVFYNSKARAFLLPIVNFLYTIPSLALFALFIPLIGVGLKN-- 86

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P 
Sbjct: 87  ------ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 140

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++   L     
Sbjct: 141 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSLITALF 193

Query: 252 IFLYDQLL 259
             L D+ +
Sbjct: 194 SVLADKFV 201



 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            +Y I L       V +   +  +  + +G+ + +     + + P    L   P+   F 
Sbjct: 15  FIYFIDLLAQHFIIVALSSFLVLVFGVLIGVLVFYNSKARAFLLPIVNFLYTIPSLALFA 74

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +     N  L L L  +      I+ +          +  + A          + 
Sbjct: 75  LFIPLIGVGLKNALLVLVLYGLL----PIVHSTYNALKEVREEVIKAAIGLGCNPKELFF 130

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +      P  + G   A        ++  +A  G +        A I       +   +
Sbjct: 131 RVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLL 183

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G LI   F +  ++F+
Sbjct: 184 VAGSLITALFSVLADKFV 201


>gi|88799388|ref|ZP_01114966.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
 gi|88777927|gb|EAR09124.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
          Length = 319

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 76/176 (43%), Gaps = 13/176 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+  VI  +  F+ A LA KSR L + LVP+ + + +IPI+G     V++F   +P K 
Sbjct: 126 VLAGYVIGCVSGFIVAQLAVKSRFLELGLVPLGNFVSAIPIVGIAPIMVMWFGFDWPSKA 185

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     I     + M  +    L ++    +++  ++     QKF    +P ++P 
Sbjct: 186 A--------VIVVMTFFPMFINTLTGLQSVDALHKDLMHTYAAKSAQKFTTTQLPQALPY 237

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +   + ++ +      + +E         P+ G+G  I+  +   ++  +   ++ 
Sbjct: 238 IFNALKINATLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNMDMVWATIVV 288



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 60/180 (33%), Gaps = 9/180 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+   +I  +    V         +   + P    ++A P     P++V    +   
Sbjct: 123 LKAVLAGYVIGCVSGFIVAQLAVKSRFLELGLVPLGNFVSAIPIVGIAPIMVMWFGFDWP 182

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + +++  T + +  N + G  +     K++  ++     + +    LP   PY 
Sbjct: 183 SK----AAVIVVMTFFPMFINTLTGLQSVDALHKDLMHTYAAKSAQKFTTTQLPQALPYI 238

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   +++     
Sbjct: 239 FNALKINATLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNMDMVWATIVVAALAG 293


>gi|107021600|ref|YP_619927.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116688056|ref|YP_833679.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105891789|gb|ABF74954.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116646145|gb|ABK06786.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 285

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 256 MIVLAVVALAADYLLTR 272



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 259 LAVVALAADYLLTRIEKRLLKW 280


>gi|326803080|ref|YP_004320898.1| toxin-antitoxin system toxin component, PIN family [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650510|gb|AEA00693.1| toxin-antitoxin system toxin component, PIN family [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 513

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYAT-LAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             L   +       L+A++I+L+     A  L ++ R     L  +  ++Q+IP      
Sbjct: 14  SDLLAASWEHLTLSLTALLIALIIGIPLAIGLRSQPRIAEGALQ-LTGVLQTIPS----- 67

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    V    + A+ A+    +  +  + Y  L  I   +EE + +F +S  
Sbjct: 68  ---LALLGLLIPLVGIGTVPALIALVVYALLPIFQNTYVGLTEIDDSIEEAAVAFGMSAM 124

Query: 178 QKFWYLGVPFSMPGLVWNMMMSM 200
           ++   + +P ++P +V  +  ++
Sbjct: 125 RRLLKVEIPIALPVIVSGIRQAL 147



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++IA II IP+ I +  +P I+        +L   P+     L++  V    +   +
Sbjct: 28  LTALLIALIIGIPLAIGLRSQPRIAEGALQLTGVLQTIPSLALLGLLIPLVGIGTVPALI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      I  N   G +   +  +E A +F ++  R    + +P   P  V+G 
Sbjct: 88  ALVVYALL----PIFQNTYVGLTEIDDSIEEAAVAFGMSAMRRLLKVEIPIALPVIVSGI 143

Query: 511 ITAC 514
             A 
Sbjct: 144 RQAL 147


>gi|325526214|gb|EGD03845.1| putative ABC transporter system permease [Burkholderia sp. TJI49]
          Length = 258

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I  L          +        V   I+DI Q+ 
Sbjct: 53  PVIYDRASLLDLTLAHLGTVALSSLIGTLVAVTAGIAVTRPSGADFLPVARSIVDIGQTF 112

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V          +I   L  +  +F         S    L ++PRD+ + +R
Sbjct: 113 PPVAVLALAVPAVGFGLKPVLIALVLYGLLPVFE--------STIAGLEDVPRDVVDAAR 164

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 165 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 217

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++  +   +L   + +  +  L    +
Sbjct: 218 AGLQTSNTAFVLQGGVIVGLLAVLVSDAI 246



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +++ +  GI +  RP  +  +   +    +   FP  
Sbjct: 57  DRASLLDLTLAHLGTVALSSLIGTLVAVTAGIAV-TRPSGADFLPVARSIVDIGQTFPPV 115

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  + A    ++GW
Sbjct: 116 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVVDAARGMGMSGW 171

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 172 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 224

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 225 TAFVLQGGVIVGLLAVLV 242


>gi|126698584|ref|YP_001087481.1| ABC transporter permease [Clostridium difficile 630]
 gi|254974548|ref|ZP_05271020.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
 gi|255091937|ref|ZP_05321415.1| ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255100035|ref|ZP_05329012.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
 gi|255313671|ref|ZP_05355254.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
 gi|255516355|ref|ZP_05384031.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
 gi|255649455|ref|ZP_05396357.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
 gi|260682621|ref|YP_003213906.1| ABC transporter permease [Clostridium difficile CD196]
 gi|260686221|ref|YP_003217354.1| ABC transporter permease [Clostridium difficile R20291]
 gi|306519532|ref|ZP_07405879.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58]
 gi|115250021|emb|CAJ67841.1| ABC-type transport system,nitrate/sulfonate/taurine permease
           [Clostridium difficile]
 gi|260208784|emb|CBA61664.1| ABC transporter, permease protein [Clostridium difficile CD196]
 gi|260212237|emb|CBE02952.1| ABC transporter, permease protein [Clostridium difficile R20291]
          Length = 261

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 15/201 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M R     ++A I  I + I         + ++P   L  + P  +   L +     
Sbjct: 70  LYSMGRCFFSFLLAMIFAIILSIVSYLNRFFRNLLKPINALTRSIPTMILVVLALIWFE- 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      ++ F   + IL+ NV+        +  E+A+ + I        I LP I
Sbjct: 129 -----KDSTPFIVGFTIVFPILYDNVLGAILNIDKNLLEMANVYKIRFIDKVLKIYLPAI 183

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
               ++  ++    +   +I  EV         T G+G  I       +   +   ++I+
Sbjct: 184 KFQIISILVSTFSLSLKVAIAGEV-----YSQPTYGIGTMIQTEKINFNTSGIFAWIIIV 238

Query: 563 CCFVLAL---NRFLWHPLYLY 580
                 L    +FL    +L+
Sbjct: 239 LLISAILQIAQKFLARRAFLW 259



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 97/248 (39%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  II + +           + + +   +   S       +  R   + +++++
Sbjct: 26  CVILLFLWQIIALKIDNDIFLPTVGQVFNSIKEIMLNSSFYIDILYSMGRCFFSFLLAMI 85

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  + + ++  +R    +L PI  + +SIP +  +   +++F       ++G  +  +F 
Sbjct: 86  FAIILSIVSYLNRFFRNLLKPINALTRSIPTMILVVLALIWFEKDSTPFIVGFTI--VFP 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I          ++  ++ NI ++L E++  +++    K   + +P     ++  ++ + S
Sbjct: 144 ILYD-------NVLGAILNIDKNLLEMANVYKIRFIDKVLKIYLPAIKFQIISILVSTFS 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                 +A E+        P  GIG+ I       +   I   ++ +L +  +     + 
Sbjct: 197 LSLKVAIAGEVYS-----QPTYGIGTMIQTEKINFNTSGIFAWIIIVLLISAILQIAQKF 251

Query: 259 LFRPMIVW 266
           L R   +W
Sbjct: 252 LARRAFLW 259


>gi|229158401|ref|ZP_04286464.1| ABC transporter permease protein [Bacillus cereus ATCC 4342]
 gi|228625079|gb|EEK81843.1| ABC transporter permease protein [Bacillus cereus ATCC 4342]
          Length = 244

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWDLFLNKWMDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|322833742|ref|YP_004213769.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168943|gb|ADW74642.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 389

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 77/201 (38%), Gaps = 15/201 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +    +   +V ++L       L  +  R    ++ +L+I+Q++P +      +     L
Sbjct: 184 QHLGILFGTLVPAVLIGLPVGLLCHRKPRWRGPVLSVLNIIQTVPSIALFGLLLAPLAGL 243

Query: 127 YPGKVIGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  AE          AI A+    +  +   +   L ++P  + E +R   ++  Q
Sbjct: 244 AKALPWLAEHGISGIGLAPAIIALVLYSLLPLVRGVIAGLESVPESVIESARGMGMNRAQ 303

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ + +P ++P ++  + +         + + +I  G       G+G+ +   +    L
Sbjct: 304 VFFRVQMPIALPVILTGVRIVAVQTVGMAMVAALIGAG-------GLGAIMFQGLLSSAL 356

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L  ++  + +  + D + 
Sbjct: 357 DLVLLGVIPAVMMAVVVDSVF 377



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 87/249 (34%), Gaps = 23/249 (9%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +   N  +  +L++     V  +        +  +  +    DV        + +     
Sbjct: 134 RFTRNHSLRILLNVQMIVPVVLLLAYGQLAELSLLKEYDNRSDVFNDALWQHLGIL--FG 191

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++ A +I +PVG+    +P     +     ++   P+   F L+++ ++          
Sbjct: 192 TLVPAVLIGLPVGLLCHRKPRWRGPVLSVLNIIQTVPSIALFGLLLAPLAGLAKALPWLA 251

Query: 453 ------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                        + ++  +   ++  VIAG  + P    E A    +   + +  + +P
Sbjct: 252 EHGISGIGLAPAIIALVLYSLLPLVRGVIAGLESVPESVIESARGMGMNRAQVFFRVQMP 311

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  +TG           ++V+ +   G       GLGA + +     +   V+LGV+
Sbjct: 312 IALPVILTGVRIVAVQTVGMAMVAALIGAG-------GLGAIMFQGLLSSALDLVLLGVI 364

Query: 561 --IMCCFVL 567
             +M   V+
Sbjct: 365 PAVMMAVVV 373


>gi|224543647|ref|ZP_03684186.1| hypothetical protein CATMIT_02857 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523420|gb|EEF92525.1| hypothetical protein CATMIT_02857 [Catenibacterium mitsuokai DSM
           15897]
          Length = 307

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 99/260 (38%), Gaps = 13/260 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L++ II  +          +++++ +   ++   L      T   ++  ++ +      
Sbjct: 50  ILILVIIGYVFSKAIPHFHFKNLIEPMSQLMNPEGLLGNIINTLYIVVGTLLFACPIGIG 109

Query: 86  YATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            A      AK+++    +    +++  IP + F  F +++F  +    +  + +   F +
Sbjct: 110 AAIYLNEYAKNKKFVAAVSFTTEVLSGIPSIIFGLFGMIFFGEML--HLGYSVINGCFTL 167

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +   +L ++P    E +     + W     + +P +MPG++  +++ M  
Sbjct: 168 TILILPIIIRNTQVALESVPSSYREAALGIGSTKWYMIRTVILPSAMPGILTGVILGMGR 227

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIK------EQDLLAILYAMLTMLGVIFLYD 256
                 A+ +   G       G  +++  +           +    Y    ++ +I +  
Sbjct: 228 I-VAESAALLFTAGSGYFMPRGFFTHLMESGGTLTIQLYMAMSNAEYGQAFVIAMILIIL 286

Query: 257 QLLFRPMIVW-SNKFRLERT 275
            L+   +  W S+KF +E+ 
Sbjct: 287 VLIMNFIAKWLSSKFNVEKA 306



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 15/147 (10%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++     T++ VV  ++ A  I I   I++          + +    ++L+  P+ +F  
Sbjct: 85  LLGNIINTLYIVVGTLLFACPIGIGAAIYLNEYAKNKKFVAAVSFTTEVLSGIPSIIF-- 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-------NVIAGASAFPNDFKEVASSFHI 488
                         L L   +I G     +        N      + P+ ++E A     
Sbjct: 143 ---GLFGMIFFGEMLHLGYSVINGCFTLTILILPIIIRNTQVALESVPSSYREAALGIGS 199

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACG 515
           T W   R +ILP   P  +TG I   G
Sbjct: 200 TKWYMIRTVILPSAMPGILTGVILGMG 226


>gi|213027114|ref|ZP_03341561.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 371

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 178 ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 237

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 238 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 289

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 290 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 342

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 343 QGALLVALAAIIIDRLFER 361



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 177 LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 234

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 235 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 290

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 291 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 343

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 344 GALLVALAAIIIDRLF 359


>gi|111220906|ref|YP_711700.1| putative ABC transporter permease [Frankia alni ACN14a]
 gi|111148438|emb|CAJ60109.1| putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 268

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V     ++  I V +       +   + P A +L + P     PL+        
Sbjct: 72  TLGDAGVGYAAGTVAAIVVAVTFVLFRSVERALMPVAMMLRSVPLVAMIPLLTLIFGRGL 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +   +++ F      L N++ G  + P    ++  ++        R + LP   P 
Sbjct: 132 TAVGVIAGIIVFF----PSLVNLVFGLRSGPPAAADLVLAYGGGPATVLRKVALPSALPA 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
               A  A  GA   ++++E  + G        LG Y+  + +  ++  V   V+++   
Sbjct: 188 LFVSARIAVPGAVIGALLAEWLATGEW------LGYYMQRAQQTFNYGGVWASVVVITVA 241

Query: 566 VLAL 569
            +AL
Sbjct: 242 SIAL 245



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 66/199 (33%), Gaps = 14/199 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              ++      T            +   V A      R +   L+P+  +++S+P++  +
Sbjct: 61  SRRAILDGLWHTLGDAGVGYAAGTVAAIVVAVTFVLFRSVERALMPVAMMLRSVPLVAMI 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               + F        + A +   F            ++   L + P    ++  ++    
Sbjct: 121 PLLTLIFGRGLTAVGVIAGIIVFF--------PSLVNLVFGLRSGPPAAADLVLAYGGGP 172

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P ++P L  +  +++ G     + +E +  G+       +G Y+  A +  
Sbjct: 173 ATVLRKVALPSALPALFVSARIAVPGAVIGALLAEWLATGEW------LGYYMQRAQQTF 226

Query: 237 DLLAILYAMLTMLGVIFLY 255
           +   +  +++ +       
Sbjct: 227 NYGGVWASVVVITVASIAL 245


>gi|23501129|ref|NP_697256.1| ABC transporter permease [Brucella suis 1330]
 gi|148559844|ref|YP_001258248.1| ABC transporter permease [Brucella ovis ATCC 25840]
 gi|161618203|ref|YP_001592090.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|163842487|ref|YP_001626891.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|254701020|ref|ZP_05162848.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|254705396|ref|ZP_05167224.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|254707095|ref|ZP_05168923.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254709364|ref|ZP_05171175.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254713215|ref|ZP_05175026.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254716431|ref|ZP_05178242.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|256030887|ref|ZP_05444501.1| binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256060354|ref|ZP_05450527.1| binding-protein-dependent transport systems inner membrane
           component [Brucella neotomae 5K33]
 gi|256368683|ref|YP_003106189.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|260567147|ref|ZP_05837617.1| ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261218217|ref|ZP_05932498.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261314568|ref|ZP_05953765.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261316876|ref|ZP_05956073.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261320935|ref|ZP_05960132.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261324333|ref|ZP_05963530.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261751545|ref|ZP_05995254.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261756111|ref|ZP_05999820.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|265987946|ref|ZP_06100503.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|294851619|ref|ZP_06792292.1| osmoprotectant transport system permease [Brucella sp. NVSL
           07-0026]
 gi|23347002|gb|AAN29171.1| ABC transporter, permease protein [Brucella suis 1330]
 gi|148371101|gb|ABQ61080.1| ABC transporter, permease protein [Brucella ovis ATCC 25840]
 gi|161335014|gb|ABX61319.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|163673210|gb|ABY37321.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|255998841|gb|ACU47240.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|260156665|gb|EEW91745.1| ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260923306|gb|EEX89874.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261293625|gb|EEX97121.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261296099|gb|EEX99595.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261300313|gb|EEY03810.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261303594|gb|EEY07091.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261741298|gb|EEY29224.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261745864|gb|EEY33790.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|264660143|gb|EEZ30404.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|294820208|gb|EFG37207.1| osmoprotectant transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 248

 Score = 70.3 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQS 109
            P+  D  +L     +    +  A   S L     A    + +      +   +++I Q+
Sbjct: 39  TPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQT 98

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P +  L   V  F           +   + A+F   +  +  +    L ++P  + E +
Sbjct: 99  FPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAA 150

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++G Q+ + + +P +MP ++  + +S   G         +           +G  I
Sbjct: 151 RGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVI 203

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
              +   +L  +L   L +  +  L 
Sbjct: 204 IAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|227544762|ref|ZP_03974811.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300908991|ref|ZP_07126454.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
 gi|227185248|gb|EEI65319.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300894398|gb|EFK87756.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
          Length = 221

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I+ II +P+G        ++     FAQLL   P+     L++  +    +   +
Sbjct: 33  VVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALI 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G +     +KEV  +  +   R  R I +P   PY + G 
Sbjct: 93  ALIVL----ALPPLLINTILGFNEVSPLYKEVGIALGMDQRRLRRQIEIPLALPYILNGI 148

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A      +A++ + + + G   L  TGLG Y       G+    +L +L M  F   +
Sbjct: 149 KLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLI 208



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +     QY  +  +  +  +VIS++       + ++ + +    V    +++ IP L  
Sbjct: 16  TNSGQYWQYVGQHIILTVVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLAL 75

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +             + A+ A+    +  +  +       +    +EV  +  + 
Sbjct: 76  LFLLIPFIGTGV--------VPALIALIVLALPPLLINTILGFNEVSPLYKEVGIALGMD 127

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             +    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 128 QRRLRRQIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 180

Query: 236 QDLLAILYAMLTMLGVIFL 254
            D+  ++   +++  +  L
Sbjct: 181 YDMSYVVIGAVSVAILSLL 199


>gi|167579285|ref|ZP_02372159.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
 gi|167617390|ref|ZP_02386021.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
          Length = 282

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  I  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLLQVWVTLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADFLLTR 269



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADFLLTRLEKRLLKW 277


>gi|71903592|ref|YP_280395.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|71802687|gb|AAX72040.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 282

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 12/178 (6%)

Query: 52  VPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPIL 104
            P   +   +P   A           ++S +    +A  AA        +    +L P +
Sbjct: 41  QPSVKNAAGIPYLGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAV 100

Query: 105 DIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +++  IP + +    L   V +  +++ G   G  L+ +  +F   +  +TF    SL  
Sbjct: 101 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRA 159

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 160 VPRHYREASMAMGATCWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 217



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 53  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 112

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 113 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 171

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 172 GATCWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPSS 222


>gi|257456701|ref|ZP_05621891.1| ABC transporter, permease protein [Treponema vincentii ATCC 35580]
 gi|257445894|gb|EEV20947.1| ABC transporter, permease protein [Treponema vincentii ATCC 35580]
          Length = 556

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 76/518 (14%), Positives = 173/518 (33%), Gaps = 76/518 (14%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +SA +++L+     A      +  G  ++ I+ IM S+           + + L    +I
Sbjct: 77  ISAALLALVIGVPIAYFMNMYKIKGAKMLQIVIIMSSMSAP--FIGAYSWILLLGRNGLI 134

Query: 133 --------GAELAAIF------AIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGW 177
                   G ++ +I+       +   Q++ + F      L NI   L E S +   SG 
Sbjct: 135 SNLIRNLTGIKVPSIYGFKGIMLVLCLQLFPLVFLYVSGALRNIDNSLLEASENMGCSGA 194

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           ++F+ L +P  MP ++   +M     +        I  G    P+    S+++    +  
Sbjct: 195 KRFFTLIIPLCMPTIIAAALMVFMRAFADFGTPLFIGEGYRTFPVEIYNSFMSETGGDTH 254

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT-------GIYPADSWVLYLFR 290
                 A+  +  +I     L+ R     +NKFR             ++   S++++ F 
Sbjct: 255 FA---CAVAVIGILITTLIFLIQRYF---NNKFRFTMNALHPIQMKEVHGIKSFLIHAFC 308

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
                       +  ++       KL  +   ++  + + F +L +    ++++      
Sbjct: 309 YIVVFTAYAPQLYVIYTSFRKASGKLFVSGYSLQ-SYRDAFSKLQNAIPNTFLIGGTAIV 367

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           ++   ++ IA+  I               I    I    ++  +I  +++ I + I    
Sbjct: 368 LIILFSVLIAYLVIRR-----------DNIVNRTIDTLSMIPYVIPGAVVGISLVIAFNR 416

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           +P                            +        + ++L++   +  Y + + +A
Sbjct: 417 KP----------------------------IVLVGTAAIMIIALVIRRCS--YTIRSSVA 446

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                P   +E A S   +  + +  +      P    G I+    +W A I    +   
Sbjct: 447 TLQQIPMSIEEAALSLGCSKMKAFFKV----TMPMMSNGIISGALLSWIAIITELSSGVI 502

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             + RTT L   I     +G++        I+    + 
Sbjct: 503 LYNYRTTTLTIQIYTYVSRGNYGIAAAMSAILTLMTVL 540



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 68/202 (33%), Gaps = 20/202 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   ++A +I +P+  ++       +K+     ++++  A          +   +   + 
Sbjct: 77  ISAALLALVIGVPIAYFMNMYKIKGAKMLQIVIIMSSMSAPFIGAYSWILLLGRNGLISN 136

Query: 451 WL----------------SLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRW 493
            +                 +L++    + ++F  ++GA     N   E + +   +G + 
Sbjct: 137 LIRNLTGIKVPSIYGFKGIMLVLCLQLFPLVFLYVSGALRNIDNSLLEASENMGCSGAKR 196

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +I+P   P  +  A+     A+           G+         ++++E+     F 
Sbjct: 197 FFTLIIPLCMPTIIAAALMVFMRAFADFGTPLFIGEGYRTFPVEIYNSFMSETGGDTHF- 255

Query: 554 EVVLGVLIMCCFVLALNRFLWH 575
                V ++   +  L   +  
Sbjct: 256 --ACAVAVIGILITTLIFLIQR 275



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 83/196 (42%), Gaps = 12/196 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP---ILGFLTFTVVYFM 124
           T L   +A+V+ +LF+ + A L     R   ++   +D +  IP       +  ++V   
Sbjct: 358 TFLIGGTAIVLIILFSVLIAYLVI---RRDNIVNRTIDTLSMIPYVIPGAVVGISLVIAF 414

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N  P  ++G     I A+   +      S   +L  IP  +EE + S   S  + F+ + 
Sbjct: 415 NRKPIVLVGTAAIMIIALVIRRCSYTIRSSVATLQQIPMSIEEAALSLGCSKMKAFFKVT 474

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVA--SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P    G++   ++S    W  ++   S  +++ +       I  Y  ++     + A +
Sbjct: 475 MPMMSNGIISGALLS----WIAIITELSSGVILYNYRTTTLTIQIYTYVSRGNYGIAAAM 530

Query: 243 YAMLTMLGVIFLYDQL 258
            A+LT++ V+ L   +
Sbjct: 531 SAILTLMTVLTLIIFM 546


>gi|110634395|ref|YP_674603.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium sp. BNC1]
 gi|110285379|gb|ABG63438.1| binding-protein-dependent transport systems inner membrane
           component [Chelativorans sp. BNC1]
          Length = 312

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL ++A  T    L    I      + A     +R +   ++P +   Q+IPIL  
Sbjct: 103 TSNRSLLKHAWITLSSTLLGFAIGTALGILIAVGIVHNRAMDKSVMPWVIASQTIPILAI 162

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   L + +  F   V  M     +S   I  DL    R++  S
Sbjct: 163 APMIIVVLNAVGISGLLPKALISTYLSFFPVVVGMVKGF-KSPEAIQIDLM---RTYNAS 218

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G Q FW L  P ++P L  +M ++++      +  E+         + G+G+ +      
Sbjct: 219 GPQTFWKLRWPSALPYLFTSMKVAVAISLVGAIVGEL-----PTGAVAGLGARLLAGSYY 273

Query: 236 QDLLAIL 242
              + I 
Sbjct: 274 GQTVQIW 280



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT+   ++   I + + I + + I     +   + P+       P     P++
Sbjct: 107 SLLKHAWITLSSTLLGFAIGTALGILIAVGIVHNRAMDKSVMPWVIASQTIPILAIAPMI 166

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +L+  + + + ++  ++ G  +      ++  +++ +G + +  +
Sbjct: 167 IVVLNAVGISGLLPKALISTYLSFFPVVVGMVKGFKSPEAIQIDLMRTYNASGPQTFWKL 226

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P   PY  T    A   +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 227 RWPSALPYLFTSMKVAVAISLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 280


>gi|194333775|ref|YP_002015635.1| phosphate ABC transporter inner membrane subunit PstA
           [Prosthecochloris aestuarii DSM 271]
 gi|194311593|gb|ACF45988.1| phosphate ABC transporter, inner membrane subunit PstA
           [Prosthecochloris aestuarii DSM 271]
          Length = 449

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       K   L  +L      +  +P + F  F + +F+N      
Sbjct: 234 AMLFAFPLGVIAAIYFTEYAKDNFLTSMLRSANSTLAGVPSIVFGLFGLAFFINTLKVSE 293

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++ ++P+   E S     + W+    + +P ++PG
Sbjct: 294 SKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYREASLGLGATKWRTIVTVILPAALPG 353

Query: 192 LVWNMMMSMSGG 203
           ++   ++S+   
Sbjct: 354 IMTGGIISLGRA 365



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 16/170 (9%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPA 430
           ++       +     L I A +   P+G+              ++S ++     LA  P+
Sbjct: 215 HIFGGISAEIRGTFFLAIGAMLFAFPLGVIAAIYFTEYAKDNFLTSMLRSANSTLAGVPS 274

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASS 485
            V F L         L  +   S+L    T   ++   I         + P  ++E +  
Sbjct: 275 IV-FGLFGLAFFINTLKVSESKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYREASLG 333

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVASWGHI 532
              T WR    +ILP   P  +TG I + G A       I +   S G  
Sbjct: 334 LGATKWRTIVTVILPAALPGIMTGGIISLGRAAGETAPIIFTAAVSVGAT 383


>gi|297623166|ref|YP_003704600.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297164346|gb|ADI14057.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 310

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 9/250 (3%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +   +   F +L     V ++L + W  +V G  +          V          ++
Sbjct: 47  AWLGERWGGRFGRLLLPGVVPFVLLLLWQGLVVGHGVPKGIFPSVTDVCAALLATFPVLL 106

Query: 381 WLGCITMFR-VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
               +T  + V +   +        G+ +     +     P A    A P     P++  
Sbjct: 107 RDAYVTFVKEVALGFALGLTAGFAAGVGVAGSRFLQRGFLPLAAAFGAVPIVGLAPVLGR 166

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +     + +++  T + +L N + G +A      E+  ++       +  + L
Sbjct: 167 AFGVDWQSK----AAVVVIVTFFPVLLNTVQGLTAVDPLQLELLRAYAARPREVFFKLRL 222

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   PY       A   +  + IV+E    G       GLG  I+ S  +G++  V   +
Sbjct: 223 PNALPYLFNALKLAAVVSVISVIVAEFLIPG----PPEGLGQRISLSARRGAYDVVFAAI 278

Query: 560 LIMCCFVLAL 569
           ++     LAL
Sbjct: 279 VVSSLVSLAL 288



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 18/273 (6%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L         R + P +   +  +L  G++  + HG+ +   P        +      L 
Sbjct: 49  LGERWGGRFGRLLLPGVVPFVLLLLWQGLV--VGHGVPKGIFPSVTDVCAALLATFPVLL 106

Query: 63  QYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           + A  T +  +     + L   F      A SR L    +P+     ++PI+G       
Sbjct: 107 RDAYVTFVKEVALGFALGLTAGFAAGVGVAGSRFLQRGFLPLAAAFGAVPIVGLAPVLGR 166

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F   +  K           +     + +  +  Q L  +     E+ R++     + F+
Sbjct: 167 AFGVDWQSKAA--------VVVIVTFFPVLLNTVQGLTAVDPLQLELLRAYAARPREVFF 218

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P ++P L   + ++       V+ +E ++ G       G+G  I+L+ +      +
Sbjct: 219 KLRLPNALPYLFNALKLAAVVSVISVIVAEFLIPGPPE----GLGQRISLSARRGAYDVV 274

Query: 242 LYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271
             A++    V          L R +  W   FR
Sbjct: 275 FAAIVVSSLVSLALYGALSWLARRVTGWHPAFR 307


>gi|297200185|ref|ZP_06917582.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197713364|gb|EDY57398.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 220

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++  ++A+ I +P+G+ IG     +      A    A P      LVV       L+   
Sbjct: 36  LLATLVAAAIGLPLGLLIGHTGKGAFLAINLASFGRALPTVG---LVVLVFLAGGLSMLP 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I+ N  AG +A   D K+ A    + G +    + LP   P  +TG 
Sbjct: 93  VYVALVAL-AVPAIVTNTYAGMTAVDPDVKDAARGQGMRGHQVLFQVELPLALPLIMTGL 151

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A       + ++   S+G       GLG Y+ +   +    +V+ G +++    +AL+
Sbjct: 152 RLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQVLGGAVLVAVIAVALD 204

Query: 571 RFL 573
             L
Sbjct: 205 LLL 207



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 74/187 (39%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +++         L   + +   + + +    +++P +G     V+ F+      + 
Sbjct: 36  LLATLVAAAIGLPLGLLIGHTGKGAFLAINLASFGRALPTVG---LVVLVFLAGGLSMLP 92

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                   A+    V  +  + Y  +  +  D+++ +R   + G Q  + + +P ++P +
Sbjct: 93  -----VYVALVALAVPAIVTNTYAGMTAVDPDVKDAARGQGMRGHQVLFQVELPLALPLI 147

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +++         +  +  G       G+G Y+   + ++DL+ +L   + +  + 
Sbjct: 148 MTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQVLGGAVLVAVIA 200

Query: 253 FLYDQLL 259
              D LL
Sbjct: 201 VALDLLL 207


>gi|295696600|ref|YP_003589838.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295412202|gb|ADG06694.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 287

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     T    V+  +  +++   VG+   +    +   +PF  LL A P     P+
Sbjct: 87  GTLLSDVLYTSGSTVIGFVSGTLVGAAVGLSFWWSRSYAEVSEPFLILLNAMPKLALAPV 146

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  +     +      L+ +  T      +  +G  +  +D + +  S        +  
Sbjct: 147 LVILLGIGFFSKVALAFLMTVIVTA----LSAYSGVKSLDSDMERLLYSLGAQRRHVFFK 202

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +++P   P+ +         A   +IV E  +         G+G  I  +      P V 
Sbjct: 203 VVVPWSMPWIIGSLRINIALALAGAIVGEFIA------SQQGVGRMILYAGTILDIPLVW 256

Query: 557 LGVLIMCCFVLAL 569
           +GV+++    + +
Sbjct: 257 VGVVVLSILSMVM 269



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 14/214 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            + P  IV    + L   +L      T+   +   V   L           SR    V  
Sbjct: 70  WSRPSTIVQTAWVQLTQGTLLSDVLYTSGSTVIGFVSGTLVGAAVGLSFWWSRSYAEVSE 129

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P L      V+     +         + +   F   V     S Y  + ++
Sbjct: 130 PFLILLNAMPKLALAPVLVILLGIGF--------FSKVALAFLMTVIVTALSAYSGVKSL 181

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             D+E +  S        F+ + VP+SMP ++ ++ ++++      +  E I        
Sbjct: 182 DSDMERLLYSLGAQRRHVFFKVVVPWSMPWIIGSLRINIALALAGAIVGEFIA------S 235

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I  A    D+  +   ++ +  +  + 
Sbjct: 236 QQGVGRMILYAGTILDIPLVWVGVVVLSILSMVM 269


>gi|172064073|ref|YP_001811724.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171996590|gb|ACB67508.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 255

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I +L          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++  +   +L   + +  +  L    +
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLVSDAI 243



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I  +I I  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGMLIAIAAGIAV-TRPAGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|326794657|ref|YP_004312477.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545421|gb|ADZ90641.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 319

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 10/234 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASI 399
           +++L + W  VV G  +          +       +  +      T  + V+V  II  +
Sbjct: 77  AFILLVLWQLVVTGFNVPKVLLPAPSTILTTFVTHLDVLGKDFAQTWLKAVLVGWIIGCL 136

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
                 + I   P +   + P   ++++ P     P++V    +   +     + +++  
Sbjct: 137 SGFIAALLIDGSPFLQKGLLPVGNIMSSIPIVGIAPIMVMWFGFDWQSK----AAVVVIM 192

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + +L N +AG  A  +   ++  ++    ++   Y+ LP   P+           A  
Sbjct: 193 TFFPMLVNTLAGLQARDSLHLDLLQTYAGKRYQVLWYVQLPAALPFIFNALKVNSTLALI 252

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +IV+E      +     G+G  I+    + +   V   +L+      A    L
Sbjct: 253 GAIVAEFFGTPIV-----GMGFRISTEVGRMNMDMVWATILVAALAGSASYGLL 301



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 14/244 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P++F  +  VL   ++            P  I+      LDV     +A      +L  
Sbjct: 72  IPSLFAFILLVLWQLVVTGFNVPKVLLPAPSTILTTFVTHLDVLG-KDFAQTWLKAVLVG 130

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +I  L  F+ A L   S  L   L+P+ +IM SIPI+G     V++F   +  K     
Sbjct: 131 WIIGCLSGFIAALLIDGSPFLQKGLLPVGNIMSSIPIVGIAPIMVMWFGFDWQSKAA--- 187

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
                 +     + M  +    L        ++ +++    +Q  WY+ +P ++P +   
Sbjct: 188 -----VVVIMTFFPMLVNTLAGLQARDSLHLDLLQTYAGKRYQVLWYVQLPAALPFIFNA 242

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++ +      + +E         P+ G+G  I+  +   ++  +   +L         
Sbjct: 243 LKVNSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNMDMVWATILVAALAGSAS 297

Query: 256 DQLL 259
             LL
Sbjct: 298 YGLL 301


>gi|315612201|ref|ZP_07887116.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
 gi|315315762|gb|EFU63799.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
          Length = 246

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 82/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +  I    + +  +P     +     D   L  ++  T    L
Sbjct: 3   RRHISLLGFLGVLSIWQLAGIFKL-LPKFILPTPFEILQSFVRDREFLWHHSWATLRVAL 61

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +V+ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 62  LGLVLGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 115

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 116 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 173

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 174 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 206



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +++  +I   + + +     ++  I P   ++   P     P++V  + Y 
Sbjct: 55  ATLRVALLGLVLGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG 114

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   +L+I  T + I+ +++ G      D   + S      W+   +  +P   P
Sbjct: 115 ----ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLP 170

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           Y+  G   +   A+  ++VSE            GLG Y+ +S +   +  +  
Sbjct: 171 YFYAGLRVSVSYAFITTVVSEWLGGFE------GLGVYMIQSKKLFQYDTMFA 217


>gi|254500320|ref|ZP_05112471.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222436391|gb|EEE43070.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 381

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 21/256 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQY 64
           SR +       LA   + G+  ++L        G+ +  +P      + +T  V +L   
Sbjct: 123 SRSLLTTRIVNLAIPAIFGVTLLILWELFVTGAGVPKVLLPAPSEIWLRMTTSVPTLWAD 182

Query: 65  ASRTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             +T ++ +L    +     F+ A L  +   L   L+PI +++ ++PI+G     V++F
Sbjct: 183 FQQTFMKAVLVGYALGCGAGFLIAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWF 242

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +P K           +     + M  +    L        ++ R++  + WQ  + L
Sbjct: 243 GFDWPSKAA--------VVIIMTFFPMLVNTVSGLAASDAMQRDLMRTYASNYWQTLFKL 294

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +   + ++ +      + +E         P+ G+G  I+  +   ++  +  
Sbjct: 295 RLPMAMPFIFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWA 349

Query: 244 AMLTMLGVIFLYDQLL 259
            +        L+  L+
Sbjct: 350 EIAVAALAGSLFYGLV 365



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 9/184 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+V   +       + I +   P +   + P   L++A P     P++V    +   +  
Sbjct: 191 VLVGYALGCGAGFLIAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSK- 249

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N ++G +A     +++  ++    W+    + LP   P+    
Sbjct: 250 ---AAVVIIMTFFPMLVNTVSGLAASDAMQRDLMRTYASNYWQTLFKLRLPMAMPFIFNA 306

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E      +     G+G  I+    + +   V   + +        
Sbjct: 307 LKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNVDMVWAEIAVAALAGSLF 361

Query: 570 NRFL 573
              +
Sbjct: 362 YGLV 365


>gi|325971774|ref|YP_004247965.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027012|gb|ADY13771.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 262

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 99/252 (39%), Gaps = 18/252 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R     F     +L+  + +++L           +   +   +           T +R 
Sbjct: 5   KRSLILFFSSAFLLLLWQVGSVMLDSQILLPGLGPVFSALVELVRQKPFTTNVFSTVVRA 64

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L + +I +    V    A +   L + L P + ++++IP++  +    ++F         
Sbjct: 65  LESFLIIVASATVIGIAAGRYPLLSLALKPFVTVLKAIPVMSIILLAFIWFT-------- 116

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +    +F+ F      M   +   +    R L+E+ R + + G  K  +  +P  +P  
Sbjct: 117 -SGTVPLFSAFLMGFPVMYVQIEGGVRQKDRLLDEMCRLYDIHGKDKLIHYTIPSLLPFF 175

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGV 251
           V     ++S  W  V+A+E++ V     P  G+GS + LA  +     +L + ++ +L  
Sbjct: 176 VIGSRATLSMVWKVVIAAEVLTV-----PRFGVGSRMQLAQVQLQTDQVLSWTLIAILLT 230

Query: 252 I---FLYDQLLF 260
                L+D L +
Sbjct: 231 ALGDLLFDSLAW 242



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 12/201 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R +   +I       +GI  G  P +S  ++PF  +L A P      L     +   
Sbjct: 60  TVVRALESFLIIVASATVIGIAAGRYPLLSLALKPFVTVLKAIPVMSIILLAFIWFTSGT 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +   L+ + LM F   +     +  G         E+   + I G     +  +P + P+
Sbjct: 120 VP--LFSAFLMGFPVMY---VQIEGGVRQKDRLLDEMCRLYDIHGKDKLIHYTIPSLLPF 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +V G+       W   I +EV       +   G+G+ +  +  +    +V+   L +   
Sbjct: 175 FVIGSRATLSMVWKVVIAAEVL-----TVPRFGVGSRMQLAQVQLQTDQVLSWTL-IAIL 228

Query: 566 VLALNRFLWHPLYLYGTRCLR 586
           + AL   L+  L  +  R L+
Sbjct: 229 LTALGDLLFDSL-AWSLRKLK 248


>gi|254246633|ref|ZP_04939954.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124871409|gb|EAY63125.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 285

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 256 MIVLAVVALAADYLLTR 272



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 259 LAVVALAADYLLTRIEKRLLKW 280


>gi|115525885|ref|YP_782796.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
 gi|115519832|gb|ABJ07816.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
          Length = 278

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 95/252 (37%), Gaps = 15/252 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             L    +   ++N     +   ++      ++ I L   +L    + T       + I 
Sbjct: 17  LGLALVAVGWTLVNRSYGALVLPSLADTGAALLRIVLSSDAL-AAVTATVGHAFGGVAIG 75

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                +   +    R +G  L P+   + ++P + ++    ++F     G         +
Sbjct: 76  AAAGLILGLIGGVVRPVGAALAPVATAILAVPPIVWVVLAFLWFGTTGTG--------IL 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +  S +  +  +  Q + +  R L E++  FRL    +   + +P     L   +  +
Sbjct: 128 FTVAISSMPILFAATLQGVRSRNRHLAEMATVFRLPLSTRLLRILLPDLAVMLSPALATA 187

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  W   + SE++  G       GIG   A+A    DL   +  ++ ++GV+   D LL
Sbjct: 188 FAISWKVALTSEVLGDGS------GIGGRFAVARAHLDLPEAMAWIILVVGVVLSSDALL 241

Query: 260 FRPMIVWSNKFR 271
             P+  W ++ R
Sbjct: 242 LGPLRRWLSRSR 253



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 12/256 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             F  L        ++ + W  V       +                    +     T+ 
Sbjct: 7   ARFSDLSYGTLGLALVAVGWTLVNRSYGALVLPSLADTGAALLRIVLSSDALAAVTATVG 66

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                + I +   + +G+  G    + + + P A  + A P  V+  L            
Sbjct: 67  HAFGGVAIGAAAGLILGLIGGVVRPVGAALAPVATAILAVPPIVWVVLAFLWFGTTGTG- 125

Query: 449 NLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                L  +  +   ILF   + G  +      E+A+ F +        I+LP +     
Sbjct: 126 ----ILFTVAISSMPILFAATLQGVRSRNRHLAEMATVFRLPLSTRLLRILLPDLAVMLS 181

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
               TA   +W  ++ SEV   G      +G+G   A +      PE +  ++++   VL
Sbjct: 182 PALATAFAISWKVALTSEVLGDG------SGIGGRFAVARAHLDLPEAMAWIILVVGVVL 235

Query: 568 ALNRFLWHPLYLYGTR 583
           + +  L  PL  + +R
Sbjct: 236 SSDALLLGPLRRWLSR 251


>gi|83319640|ref|YP_424458.1| phosphate ABC transporter, permease, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283526|gb|ABC01458.1| phosphate ABC transporter, permease, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 696

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 77/535 (14%), Positives = 179/535 (33%), Gaps = 65/535 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF +LA V+++G + I  + +       D V     + D     +      T + +  +M
Sbjct: 35  IFVVLALVILLGFVMIKTNVLFNKQSFFDFVFGKNWSPDSKQFGILTITLMTLILIFISM 94

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    V + I+ ++  IP + F  F    +     L     
Sbjct: 95  LIAVPLTIFTSFFISEYLTLKSQKVTITIIKLLAGIPSVVFGLFAREQIGALFKLIGASS 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 155 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPFIYRDASLALGISKEKTTFNIIRKSATPK 214

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ M+      +A  MI        DT   + G            IG  +     
Sbjct: 215 IISAVILGMARVIGETMAIMMIAGNSTAWFDTNNGISGFLFSSIRTLSSTIGLEMLENSS 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+                          L++  K + 
Sbjct: 275 SLHESALYAIGMFLFILVFIINLLI--------------------------LFVSNKNSI 308

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--V 352
            + I    +           KL +   + +        +L      + ML + W  +  V
Sbjct: 309 SQKIHLVLFKNKKTHKIKHIKLYQRQTLDQIITNRAENKLFRKIYSTIMLVLMWLSISFV 368

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVI---WLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 I + +    ++   Y +    I         +   ++LI+   +  IP+ +   
Sbjct: 369 IMFTFWIVFTTTFNGLSGLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFAIPLALACA 428

Query: 410 F--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGT 460
                       ++   +    L A+ P+ +F    +S    Y  L  +++ +   +   
Sbjct: 429 IYLSEFANKNSWLAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASFTMTIV 488

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A 
Sbjct: 489 VLPMLIKNFEDALTSVPLSYREAAIALGLSKTKTLFKIVLPNALQAIITGTILAM 543



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 56/127 (44%), Gaps = 2/127 (1%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A+ ++L      +  A K+  L      +L++  S P + F  F +  F+     K+  +
Sbjct: 420 AIPLALACAIYLSEFANKNSWLAKFFRFLLNLAASTPSIIFGIFGLSVFIIYL--KLPFS 477

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +A F +    +  +  +   +L ++P    E + +  LS  +  + + +P ++  ++ 
Sbjct: 478 IFSASFTMTIVVLPMLIKNFEDALTSVPLSYREAAIALGLSKTKTLFKIVLPNALQAIIT 537

Query: 195 NMMMSMS 201
             +++M+
Sbjct: 538 GTILAMA 544


>gi|228929838|ref|ZP_04092853.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936098|ref|ZP_04098904.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948534|ref|ZP_04110814.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229124352|ref|ZP_04253541.1| ABC transporter permease protein [Bacillus cereus 95/8201]
 gi|228659105|gb|EEL14756.1| ABC transporter permease protein [Bacillus cereus 95/8201]
 gi|228811133|gb|EEM57474.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823553|gb|EEM69379.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829754|gb|EEM75376.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 244

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWDLFLNKWMDGSLWIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|300172954|ref|YP_003772120.1| phosphate ABC transporter permease PstC [Leuconostoc gasicomitatum
           LMG 18811]
 gi|299887333|emb|CBL91301.1| phosphate ABC transporter, permease protein PstC [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 307

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 87/221 (39%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF--- 115
           A    L       ++ +    +A   +        +R   ++ P+++++  IP + +   
Sbjct: 83  ALPMILGSFLVTFLAAIVATPFAIGTSLFMTEIAQKRGAKIMQPVIELLVGIPSVVYGFI 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LT  V +  +++ G   G     I   F   +  +T     +L ++PR   E + +   
Sbjct: 143 GLTVVVPFIRSVFGGSGFGILSGTIVL-FVMVLPTITSMTVDTLKSVPRHYRESALAIGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  + + +  + PG++  ++  M+  +   +A +M++                 T I
Sbjct: 202 TRWQMIYKVVLRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPHNLTSPASTLTSI 261

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +  +++   L  +   +L M  V  L  + + R
Sbjct: 262 LTMGIGNTVMGSLQNDVLWTLAMILLVMSLVFNLVVRAIGR 302



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 30/227 (13%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQL 424
           +VN  T Q  +  + +   +     +  I+A+   I   +++    +   +  +QP  +L
Sbjct: 71  VVNPQTKQPYIGALPMILGSFLVTFLAAIVATPFAIGTSLFMTEIAQKRGAKIMQPVIEL 130

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
           L   P+ V+         P + S              +L +      I    +    + P
Sbjct: 131 LVGIPSVVYGFIGLTVVVPFIRSVFGGSGFGILSGTIVLFVM-VLPTITSMTVDTLKSVP 189

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH----- 531
             ++E A +   T W+    ++L    P  +T  +     A+  ++  ++          
Sbjct: 190 RHYRESALAIGATRWQMIYKVVLRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPH 249

Query: 532 ---------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                      + T G+G     +T  GS    VL  L M   V++L
Sbjct: 250 NLTSPASTLTSILTMGIG-----NTVMGSLQNDVLWTLAMILLVMSL 291


>gi|237806604|ref|ZP_04593308.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331027717|gb|EGI07772.1| glycine/betaine/L-proline ABC transporter, permease protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 132

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 15/147 (10%)

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           ++P   +L  T+  F     G V G     +FAI            Y  + ++P++L + 
Sbjct: 1   TVPTFVYLIPTLTLFGL---GVVPGLISTVVFAIAAP-----IRLTYLGIRDVPQELLDA 52

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            ++F  S  Q    + +P++MP +   +   +      VV + ++          G+G  
Sbjct: 53  GKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALV-------GADGLGKP 105

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  A+   D+     A L ++ +  + 
Sbjct: 106 VVNALNTADIALGFEAGLAIVLLAIML 132



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 8/133 (6%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  ++ + L     L   ++F     I      G    P +  +   +F  +  +    
Sbjct: 8   LIPTLTLFGLGVVPGLISTVVFAIAAPIRL-TYLGIRDVPQELLDAGKAFGSSRRQLLTR 66

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LP   P    G       + +  +++ +           GLG  +  +          
Sbjct: 67  IELPYAMPSIAAGITQCIMLSLSMVVIAALVG-------ADGLGKPVVNALNTADIALGF 119

Query: 557 LGVLIMCCFVLAL 569
              L +    + L
Sbjct: 120 EAGLAIVLLAIML 132


>gi|86750448|ref|YP_486944.1| substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris HaA2]
 gi|86573476|gb|ABD08033.1| Substrate-binding region of ABC-type glycine betaine/choline
           transport system [Rhodopseudomonas palustris HaA2]
          Length = 519

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ 111
           + +LP          L+A+ + L+ +   A +A +   L   L+    I+Q+IP      
Sbjct: 13  LANLPDTLGAHVRVSLAALALGLVVSLPLAIVARRRPILRGALLGFAGIVQTIPGLALLA 72

Query: 112 --ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 L    +       G      L A+ A+    +  +  +    L  +   L E +
Sbjct: 73  LFYPLLLALAALSLRAFGVGFSAFGFLPAVLALALYAMLPVLRNTITGLDGVDPALVEAA 132

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +   ++  Q    + VP ++P ++  +  +    W    A+    +G T      +G+YI
Sbjct: 133 QGVGMTPRQVLTMVEVPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LGNYI 185

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              ++ Q+ + +L+       +    DQLL
Sbjct: 186 FAGLQTQNWVLVLFGCAAAAVLALAVDQLL 215



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 63/205 (30%), Gaps = 20/205 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +     + + L  +        RV +  + +  ++ +P+ I    RP +   +  FA ++
Sbjct: 3   LFGDPRWNEALANLPDTLGAHVRVSLAALALGLVVSLPLAIVARRRPILRGALLGFAGIV 62

Query: 426 AAFP------------ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
              P              +    + +    +     L   L +       +L N I G  
Sbjct: 63  QTIPGLALLALFYPLLLALAALSLRAFGVGFSAFGFLPAVLALALYAMLPVLRNTITGLD 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    + +P   P  + G  TA    W     +     G   
Sbjct: 123 GVDPALVEAAQGVGMTPRQVLTMVEVPLALPVIMAGIRTAA--VWVIGTATLSTPIGQTS 180

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLG 558
                LG YI    +  ++  V+ G
Sbjct: 181 -----LGNYIFAGLQTQNWVLVLFG 200


>gi|323342334|ref|ZP_08082566.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463446|gb|EFY08640.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 201

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                 +L + +  L+   +   +A    +    ++ ++DI+Q+IP L  L   + +F  
Sbjct: 7   LEHLFLVLVSALFLLILGLIIGMIAYVYPKFKKPILLLVDILQTIPTLAMLGILMAFFGP 66

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    +   I  +    +  +  +    L ++   + E ++   ++  Q+ + + +
Sbjct: 67  --------TKKTVIIGLVLYSLLPVVLNTVTGLESVDPGIREAAQGMGMTKIQRLFKVEL 118

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +   M ++       VV S  + V  +++   G+GS +   ++ Q++  I Y  
Sbjct: 119 PIAFPFIFSGMRIA-------VVTSVGVAVFGSLVGGGGLGSILYRGVRTQNMKLIGYGT 171

Query: 246 LTMLGVIFLYDQLLFRP 262
           L ++ +  + D  + + 
Sbjct: 172 LALIVISLVIDTAMGQY 188



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 38/113 (33%), Gaps = 4/113 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P     I     +L   P      ++++            + + ++  +   ++ N + 
Sbjct: 34  YPKFKKPILLLVDILQTIPTLAMLGILMAFFG----PTKKTVIIGLVLYSLLPVVLNTVT 89

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           G  +     +E A    +T  +    + LP  FP+  +G   A   +   ++ 
Sbjct: 90  GLESVDPGIREAAQGMGMTKIQRLFKVELPIAFPFIFSGMRIAVVTSVGVAVF 142


>gi|269925352|ref|YP_003321975.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
 gi|269789012|gb|ACZ41153.1| binding-protein-dependent transport systems inner membrane
           component [Thermobaculum terrenum ATCC BAA-798]
          Length = 271

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I++ +       ++ ++ + T    +  ++   +       LAA+ + L  ++ P
Sbjct: 55  SSPSRIIETLIQQFSTGAIWKHLAATMQAAIFGLIYGFIAGAALGWLAARFKTLSQIVEP 114

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++ +  S+P +      +++       K+  A +     +F        F++Y  +  + 
Sbjct: 115 VMTLFNSVPRIVIAPMIIMWLGIGIASKIAVAFILVFVVLF--------FAVYTGIREVN 166

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +DL +  R    +       + VP     +  ++ +++   +   +      VG+ +   
Sbjct: 167 KDLIDRIRLLGGNERDIILNVYVPSVAAWIFSSLRLTVGFAFTGAI------VGEYMASS 220

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            G+G  +  A   Q+   +L  ++ ++ +I L   LL R
Sbjct: 221 RGLGYMLNFAQNSQNADLMLSTVVLIMAIIMLIFALLGR 259



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 77/242 (31%), Gaps = 16/242 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVL 393
           + + L + +  +    A      +  Y       + ++     G I      TM   +  
Sbjct: 28  LRWGLLLVFLALWELGARTGFIDTYFYSSPSRIIETLIQQFSTGAIWKHLAATMQAAIFG 87

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +I   I    +G        +S  ++P   L  + P  V  P+++  +     +      
Sbjct: 88  LIYGFIAGAALGWLAARFKTLSQIVEPVMTLFNSVPRIVIAPMIIMWLGIGIASKIAVAF 147

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +L+       + F V  G      D  +               + +P +  +  +     
Sbjct: 148 ILVFVV----LFFAVYTGIREVNKDLIDRIRLLGGNERDIILNVYVPSVAAWIFSSLRLT 203

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G A+  +IV E  +       + GLG  +  +    +   ++  V+++   ++ +   L
Sbjct: 204 VGFAFTGAIVGEYMA------SSRGLGYMLNFAQNSQNADLMLSTVVLIMAIIMLIFALL 257

Query: 574 WH 575
             
Sbjct: 258 GR 259


>gi|163744656|ref|ZP_02152016.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161381474|gb|EDQ05883.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 280

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 82/249 (32%), Gaps = 10/249 (4%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            +    P  +  L S       L   W  VV G  I         ++       +  +  
Sbjct: 21  WLARQKPSRWAALASPIVFGLTLIAVWEGVVRGFDINQVLLPAPSVIAARFATSLDILWV 80

Query: 382 LGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               T+ +  +   II         + I   P +   + P    +AA P     P++V  
Sbjct: 81  DFVQTVIKGALSGYIIGCGAAFLTALAIDRFPFLQRGLLPVGNFVAALPIIGMAPIMVMW 140

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
             +   +    + +++ F     +L N + G  A  +  +++  ++    WR    + LP
Sbjct: 141 FGFGWQSKAAIVVVMVFF----PMLVNTVQGLQASDSMQRDLMRTYAAGYWRTLLKLRLP 196

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P+   G       A   +IV+E      +     G+G  I+ S  + +   V   ++
Sbjct: 197 AAMPFVFNGLKIGTTLALIGAIVAEFFGSPVL-----GMGFRISTSVGQLALDLVWAEIV 251

Query: 561 IMCCFVLAL 569
           +      A 
Sbjct: 252 VAAIAGSAF 260



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 93/254 (36%), Gaps = 21/254 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           R  P+ +  LA  +V G+  I +         I +  +P   V        +  L     
Sbjct: 24  RQKPSRWAALASPIVFGLTLIAVWEGVVRGFDINQVLLPAPSVIAARFATSLDILWVDFV 83

Query: 67  RTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T ++  LS  +I     F+ A    +   L   L+P+ + + ++PI+G     V++F  
Sbjct: 84  QTVIKGALSGYIIGCGAAFLTALAIDRFPFLQRGLLPVGNFVAALPIIGMAPIMVMWFGF 143

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +  K           +     + M  +  Q L        ++ R++    W+    L +
Sbjct: 144 GWQSKAA--------IVVVMVFFPMLVNTVQGLQASDSMQRDLMRTYAAGYWRTLLKLRL 195

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +  +      + +E         P+ G+G  I+ ++ +  L  +   +
Sbjct: 196 PAAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVLGMGFRISTSVGQLALDLVWAEI 250

Query: 246 LTMLGVIFLYDQLL 259
           +        +  ++
Sbjct: 251 VVAAIAGSAFYGIM 264


>gi|238763802|ref|ZP_04624760.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           kristensenii ATCC 33638]
 gi|238697932|gb|EEP90691.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           kristensenii ATCC 33638]
          Length = 266

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 86/252 (34%), Gaps = 23/252 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +L   +  +   G   + +  D+   + +     SL          +L + +I++ 
Sbjct: 23  WALLLLAGLVFGMTSLGGIFSALFPDLDRPIYVQDTFWSL---VVAHVFLVLVSSIIAIF 79

Query: 82  FTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                     +   +    V+  I+ + Q+ P +  L   V             +E  AI
Sbjct: 80  IGVSAGIGVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMG--------FSEKPAI 131

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    +  +       + ++ RD+ EV+    ++  Q  W + +P + P +V  +  S
Sbjct: 132 IALVLYGLLPILQGTITGVESVSRDIREVAEGVGMNARQILWRVELPLAAPVIVAGIRTS 191

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +        A+    VG        +GS I + +   +   ++   + +  +  + D + 
Sbjct: 192 VII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIF 244

Query: 260 F---RPMIVWSN 268
               R +  W  
Sbjct: 245 TRWNRRLSRWRE 256



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 20/245 (8%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +   ++ G+  G+      +          +YV       +   V L++++SII I +G+
Sbjct: 23  WALLLLAGLVFGMTSLGGIFSALFPDLDRPIYVQDTFWSLVVAHVFLVLVSSIIAIFIGV 82

Query: 407 WIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             G            S ++    +   FP      + V  + +      + L L  +   
Sbjct: 83  SAGIGVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL-- 140

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   I G  +   D +EVA    +   +    + LP   P  V G  T+       
Sbjct: 141 --PILQGTITGVESVSRDIREVAEGVGMNARQILWRVELPLAAPVIVAGIRTSVIINIGT 198

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPL 577
           + ++         + T  LG+ I       +   V+ G +++    +  +     W   L
Sbjct: 199 AAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIFTRWNRRL 251

Query: 578 YLYGT 582
             +  
Sbjct: 252 SRWRE 256


>gi|218262379|ref|ZP_03476865.1| hypothetical protein PRABACTJOHN_02539 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223413|gb|EEC96063.1| hypothetical protein PRABACTJOHN_02539 [Parabacteroides johnsonii
           DSM 18315]
          Length = 396

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 12/200 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+V+SL F    A   A+  ++R   +L PI++++  IP + +    L   V      
Sbjct: 184 IGAIVLSLPFGIAVAIYMAEIANKRTRDLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 243

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +   V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 244 FDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 303

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 304 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 363

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
             Y  L +LG +     L+ 
Sbjct: 364 AHYEALFLLGAVLFLITLIL 383



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I+++    I V I++           ++P  +LLA  P+ V+         PL+   
Sbjct: 184 IGAIVLSLPFGIAVAIYMAEIANKRTRDLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 243

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                       S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 244 FDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 303

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 304 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 340


>gi|294341775|emb|CAZ90204.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 380

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 24/265 (9%)

Query: 18  NIFDLLAFVLVIGIINILLH--GIQETTVPRDIVDIVPITLD-----VHSLPQYASRTTL 70
           +  D  +   V+G+  +L    G+    VPR I+      L        +L Q A +T +
Sbjct: 123 SRLDAQSAAAVLGLWALLFWQLGVTAFDVPRVILPAPQWVLASLVERAGTLVQDAMQTLV 182

Query: 71  R-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           R  L+  +I     F  A    +   L   L+PI  +  ++P++G     V++F   +  
Sbjct: 183 REALTGWLIGCGLGFGVALAIDRHSFLQRGLLPIASMTSAVPLVGVAPIAVMWFGFGWES 242

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K           +     + M  S    L        E+ +++  S  Q  W L +P ++
Sbjct: 243 KAA--------VVALMTFFPMLVSTLAGLRAAGTLEAELMQTYGASHRQTLWLLKLPSAV 294

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  + ++ +      + +E         P  G+G  I+      ++  +  A+    
Sbjct: 295 PQMITALKINATLALIGAIVAEFFGS-----PTVGLGFRISTEAARMNMGLVWAAITAAS 349

Query: 250 G---VIFLYDQLLFRPMIVWSNKFR 271
               V +    LL R    W    R
Sbjct: 350 VAGSVAYAALVLLERRAAFWHPSVR 374



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 9/176 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +I   +   V + I     +   + P A + +A P     P+ V    +   +   
Sbjct: 186 LTGWLIGCGLGFGVALAIDRHSFLQRGLLPIASMTSAVPLVGVAPIAVMWFGFGWESK-- 243

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             + ++   T + +L + +AG  A      E+  ++  +  +    + LP   P  +T  
Sbjct: 244 --AAVVALMTFFPMLVSTLAGLRAAGTLEAELMQTYGASHRQTLWLLKLPSAVPQMITAL 301

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                 A   +IV+E          T GLG  I+    + +   V   +       
Sbjct: 302 KINATLALIGAIVAEFFGS-----PTVGLGFRISTEAARMNMGLVWAAITAASVAG 352


>gi|89900641|ref|YP_523112.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
 gi|89345378|gb|ABD69581.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
          Length = 392

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 65/154 (42%), Gaps = 8/154 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L++++ +LL        + +SR L   L  +L+++Q++P +      +     L     
Sbjct: 192 VLASLLPALLIGVPLGLASNRSRALRPPLFAVLNVIQTVPSIALFGLLMAPLALLAASVP 251

Query: 132 IGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + A+L         A+ A+    +  +  S    L  +P  + E +R   L+  Q FW +
Sbjct: 252 VLAQLGIKGIGLAPAVIALTLYALLPVVRSTAAGLSQVPAPVIEAARGMGLTARQIFWRV 311

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            +P ++P  +  + ++        V + +I  G 
Sbjct: 312 ELPLALPIFLSGLRVATVQTIGMAVVAALIGAGG 345



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 80/247 (32%), Gaps = 23/247 (9%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            I  +S      L      L     + R     ++  L +   +  +  +        ++
Sbjct: 110 AIARTSLGGAFWLLAVFSWLAAADAIQRLALKPSWRLLGAGVVIVPLGLLLGGGAFKDLS 169

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +   + +   +     +Q V             V+  ++ A +I +P+G+       +  
Sbjct: 170 LLKEYANRQDVFTTALWQHV-----------QIVLASLLPALLIGVPLGLASNRSRALRP 218

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL------------SLLMIFGTQWYI 464
            +     ++   P+   F L+++ ++    +  +               + +       +
Sbjct: 219 PLFAVLNVIQTVPSIALFGLLMAPLALLAASVPVLAQLGIKGIGLAPAVIALTLYALLPV 278

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + +  AG S  P    E A    +T  + +  + LP   P +++G   A       ++V+
Sbjct: 279 VRSTAAGLSQVPAPVIEAARGMGLTARQIFWRVELPLALPIFLSGLRVATVQTIGMAVVA 338

Query: 525 EVASWGH 531
            +   G 
Sbjct: 339 ALIGAGG 345


>gi|146337823|ref|YP_001202871.1| ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146190629|emb|CAL74631.1| Putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 268

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 7/163 (4%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P+A +L   P     PL++  +            +       + +L N   
Sbjct: 93  SRWLEWALFPYAVVLQVTPVIAIAPLLLIYLPQQTAVVTCAWIV-----GFFPVLSNTAL 147

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G ++   +   +   +  + W+  RY+ LP   PY + G   A G +   ++V+E+A+  
Sbjct: 148 GLNSVDRNLAGLFQLYGASRWQTLRYLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGS 207

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   L   IAES  + + P +   ++++    + +   L
Sbjct: 208 AGAGSG--LAYRIAESGYRLNIPRMFAALVLLSVAGIVIYGLL 248



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 11/167 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR L   L P   ++Q  P++      ++Y         +  + A +   +    + +  
Sbjct: 93  SRWLEWALFPYAVVLQVTPVIAIAPLLLIY---------LPQQTAVVTCAWIVGFFPVLS 143

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    L ++ R+L  + + +  S WQ   YL +P ++P ++  + ++        V +E+
Sbjct: 144 NTALGLNSVDRNLAGLFQLYGASRWQTLRYLKLPAALPYILGGLRIAGGLSLIGAVVAEI 203

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                       +   IA +    ++  +  A++ +     +   LL
Sbjct: 204 AAGSAGAGSG--LAYRIAESGYRLNIPRMFAALVLLSVAGIVIYGLL 248


>gi|289168876|ref|YP_003447145.1| ABC transporter permease, nitrate/sulfonate/bicarbonate transport
           [Streptococcus mitis B6]
 gi|288908443|emb|CBJ23285.1| ABC transporter permease, nitrate/sulfonate/bicarbonate transport
           [Streptococcus mitis B6]
          Length = 253

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 82/219 (37%), Gaps = 15/219 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R   ++   L  + +  +   L   + +  +P     +     D   L  ++  T    L
Sbjct: 10  RRHISLLGFLGVLSIWQLAGFLKL-LPKFILPTPFEILQSFVRDREFLWHHSWATLRVAL 68

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++ +L   + A L      L  ++ P++ ++Q+IP +      V++           
Sbjct: 69  LGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI------ 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P   
Sbjct: 123 --LPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFY 180

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +S+S  +   V SE +          G+G Y+  +
Sbjct: 181 AGLRVSVSYAFITTVVSEWLGG------FEGLGVYMIQS 213



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 81  MAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 136

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 137 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 196

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 197 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 224


>gi|149916446|ref|ZP_01904965.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseobacter sp. AzwK-3b]
 gi|149809716|gb|EDM69570.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseobacter sp. AzwK-3b]
          Length = 291

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 83/216 (38%), Gaps = 16/216 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL  ++  T        V+        A     +R + M ++P +   Q+IPIL 
Sbjct: 82  GFSKRSLIYHSWVTFSATALGFVLGTGLGIALAIGIVYNRTMDMSVMPWVIASQTIPILA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +V    +    ++   + +++  F    + +   M + L +      +  R++  
Sbjct: 142 IAPMIIVVLNAVGISGLLPKAMISMYLSF----FPVVVGMVKGLRSPAPMQLDQMRTWSA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q FW L +P SMP L  ++ + M+      +  E+         + G+G+ +     
Sbjct: 198 TPAQTFWRLRLPSSMPYLFASLKIGMAASLVGAIVGEL-----PTGAVAGLGARLLAGSY 252

Query: 235 EQDLLAILYAML-------TMLGVIFLYDQLLFRPM 263
               + I  A++        ++G+I +  +++ + M
Sbjct: 253 YGQTIQIWSALIMAATLAAILVGLIGVLQRIILKRM 288



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 81/214 (37%), Gaps = 5/214 (2%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W++ G +V +        +I+   +T     +  ++ + + I + I I +   +   + 
Sbjct: 69  IWKTTGDMVLNGRGFSKRSLIYHSWVTFSATALGFVLGTGLGIALAIGIVYNRTMDMSVM 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+       P     P+++  ++   ++  L  +++ ++ + + ++  ++ G  +     
Sbjct: 129 PWVIASQTIPILAIAPMIIVVLNAVGISGLLPKAMISMYLSFFPVVVGMVKGLRSPAPMQ 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   ++  T  + +  + LP   PY           +   +IV E+ +         GL
Sbjct: 189 LDQMRTWSATPAQTFWRLRLPSSMPYLFASLKIGMAASLVGAIVGELPTGA-----VAGL 243

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           GA +   +  G   ++   +++       L   +
Sbjct: 244 GARLLAGSYYGQTIQIWSALIMAATLAAILVGLI 277


>gi|229046617|ref|ZP_04192267.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH676]
 gi|228724704|gb|EEL76011.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus AH676]
          Length = 113

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +   L +V+R    S  +    L +P ++P L+    +S+   W  +V +E++       
Sbjct: 1   MDSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------ 54

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274
              GIG  I  A +  +   +   ++    V    D   +LL    + W + F+ E 
Sbjct: 55  STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEAKFLRWRDNFKGET 111



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             +   +VA     +  +    +ILP   P  + GA  + G AW + +V+E+        
Sbjct: 1   MDSKLFDVARVLEFSKRKLITKLILPSALPNLLLGARLSLGVAWVSLVVAELMG------ 54

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 55  STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 93


>gi|169349475|ref|ZP_02866413.1| hypothetical protein CLOSPI_00193 [Clostridium spiroforme DSM 1552]
 gi|169293550|gb|EDS75683.1| hypothetical protein CLOSPI_00193 [Clostridium spiroforme DSM 1552]
          Length = 288

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 95/250 (38%), Gaps = 16/250 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+ I  IL  GI        +     +   V  LP     T   ++  ++++  
Sbjct: 28  LSVLILVVCIGYILYRGIPHFDFSYLVNTTSILKGTVGILPN-IINTLYIIVVTLLVACP 86

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK+++   V+    +++  IP + +  F +++F NL   K+  + L  
Sbjct: 87  IGIGGAIYLNEYAKNKKFVSVISFTTEVLAGIPSIIYGLFGMLFFGNLL--KLKFSILTG 144

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +    +  +  +   +L  +P+   E +     + W     + +P +MPG++  +++
Sbjct: 145 SFTLAIMILPIICRNTQVALEGVPKSYREAALGIGATKWYMIRTVLLPSAMPGILTGIIL 204

Query: 199 SMS------GGWFFVVASEMIVVGDTVIPLPGIGS----YIALAIKEQDLLAILYAMLTM 248
            M           F   S  ++  +    L   G+     + L + + +        L +
Sbjct: 205 GMGRIVAESAALLFTAGSVSVLPTNVFSHLFSSGATLTIQLYLEMAKANYETAFVIALVL 264

Query: 249 LGVIFLYDQL 258
           + ++   + L
Sbjct: 265 IVIVLALNFL 274



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 81/249 (32%), Gaps = 18/249 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGY---IVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            S  L +    V  G  +        +   +      +  + ++     T++ +VV +++
Sbjct: 24  ASSALSVLILVVCIGYILYRGIPHFDFSYLVNTTSILKGTVGILPNIINTLYIIVVTLLV 83

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWL 452
           A  I I   I++          S I    ++LA  P+ ++    +        L  ++  
Sbjct: 84  ACPIGIGGAIYLNEYAKNKKFVSVISFTTEVLAGIPSIIYGLFGMLFFGNLLKLKFSILT 143

Query: 453 SLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
               +      I+  N        P  ++E A     T W   R ++LP   P  +TG I
Sbjct: 144 GSFTLAIMILPIICRNTQVALEGVPKSYREAALGIGATKWYMIRTVLLPSAMPGILTGII 203

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT----------GLGAYIAESTEKGSFPEVVLGVLI 561
              G     S      +     L T            L   +     K ++    +  L+
Sbjct: 204 LGMGRIVAESAALLFTAGSVSVLPTNVFSHLFSSGATLTIQLYLEMAKANYETAFVIALV 263

Query: 562 MCCFVLALN 570
           +   VLALN
Sbjct: 264 LIVIVLALN 272


>gi|251795830|ref|YP_003010561.1| phosphate ABC transporter inner membrane protein PstC
           [Paenibacillus sp. JDR-2]
 gi|247543456|gb|ACT00475.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus sp. JDR-2]
          Length = 300

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 92/210 (43%), Gaps = 17/210 (8%)

Query: 73  LSAMVISLLFTFVYATLAA-----KSRRLGM-VLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ +        AA      S +LG   + P+++++  IP + +    L+  V  
Sbjct: 85  FSTSILAAIIAAPLGFCAAVFMIELSPKLGRTFMQPVIELLAGIPSVVYGFVGLSVIVPL 144

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F NL+PG+ +G    AI   F       T +   +L ++P  L+E S +   + WQ  + 
Sbjct: 145 FRNLFPGQGVGIAAGAIVLAFMILPTITTIAT-DALASLPAGLKEGSYALGATRWQTIYR 203

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQ 236
           + +P ++P  +  +++ ++  +   +A +M++     I          + S I L++   
Sbjct: 204 IVLPTTLPAQMTGIVLGIARAFGEALAVQMVIGNAPHIPHSLFESTSTLTSAITLSMGNT 263

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            + ++    L  L +I +    +F  +I W
Sbjct: 264 AMGSVQNNALWSLALILMLMTFVFVFIIRW 293



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 391 VVLIIIASIIWIPVGI-----WIGFRPHISS-KIQPFAQLLAAFPANVF--------FPL 436
               I+A+II  P+G       I   P +    +QP  +LLA  P+ V+         PL
Sbjct: 85  FSTSILAAIIAAPLGFCAAVFMIELSPKLGRTFMQPVIELLAGIPSVVYGFVGLSVIVPL 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
             +      +       +L        I        ++ P   KE + +   T W+    
Sbjct: 145 FRNLFPGQGVGIAAGAIVLAFMI-LPTITTIATDALASLPAGLKEGSYALGATRWQTIYR 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           I+LP   P  +TG +     A+  ++  ++      H+  +
Sbjct: 204 IVLPTTLPAQMTGIVLGIARAFGEALAVQMVIGNAPHIPHS 244


>gi|16126075|ref|NP_420639.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221234845|ref|YP_002517281.1| transporter [Caulobacter crescentus NA1000]
 gi|13423269|gb|AAK23807.1| ABC transporter, permease protein [Caulobacter crescentus CB15]
 gi|220964017|gb|ACL95373.1| transporter [Caulobacter crescentus NA1000]
          Length = 271

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 80/223 (35%), Gaps = 13/223 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +++  +           ++     ++ R+ + + IA+ + + +G+ +G  P + +K  P 
Sbjct: 53  EAVQLMARVDPLTGHAPLLVDTLASLERMGLALAIATAVSLLLGLSLGLLPLLRAKFGPL 112

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              +A  P     P++                 L++FG    ++ ++ A  +A P +   
Sbjct: 113 VAGIAVIPPIAVLPILFIVFGLGET----AKIALIVFGVAPVMVRDLAAHVAAIPEEQLV 168

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +   + W+    + LP   P  +     +   AW   I +E  +         GLG 
Sbjct: 169 KAQTLGSSTWQLALRVALPQAMPRLIDSLRLSLCPAWVYLISAEAIA------ADVGLGY 222

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581
            I       S   ++  V  +    + ++   R +    Y + 
Sbjct: 223 RIFLVRRYLSMDIILPYVAWISLLAVIMDVTLRLISRRAYPWA 265



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 31/259 (11%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--------------LPQYASRTTLR 71
           +L  G++ ++    +    PRD +   P  +                  L      +  R
Sbjct: 21  LLAAGLLYLMASQARHAENPRDKLLPTPEAMAEAVQLMARVDPLTGHAPLLVDTLASLER 80

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  A+ I+   + +          L     P++  +  IP +  L    + F        
Sbjct: 81  MGLALAIATAVSLLLGLSLGLLPLLRAKFGPLVAGIAVIPPIAVLPILFIVFGLG----- 135

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A I  I       M   +   +  IP +    +++   S WQ    + +P +MP 
Sbjct: 136 ---ETAKIALIVFGVAPVMVRDLAAHVAAIPEEQLVKAQTLGSSTWQLALRVALPQAMPR 192

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+ ++ +S+   W +++++E I          G+G  I L  +   +  IL  +  +  +
Sbjct: 193 LIDSLRLSLCPAWVYLISAEAIA------ADVGLGYRIFLVRRYLSMDIILPYVAWISLL 246

Query: 252 IFLYD---QLLFRPMIVWS 267
             + D   +L+ R    W+
Sbjct: 247 AVIMDVTLRLISRRAYPWA 265


>gi|115359284|ref|YP_776422.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284572|gb|ABI90088.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 255

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I +L          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSLIGMLIAVAAGIAVTRPAGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++  +   +L   + +  +  L    +
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLVSDAI 243



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I  +I +  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGMLIAVAAGIAV-TRPAGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|167465081|ref|ZP_02330170.1| hypothetical protein Plarl_21401 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383298|ref|ZP_08057098.1| choline ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152418|gb|EFX45217.1| choline ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 218

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 10/137 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVVY 122
                +    ++++  L         A +R   +  ++  I +++Q+IP L  L   +  
Sbjct: 19  LGEHIMITFVSVILGCLVAIPLGIFLAGNRVKFINSIVFMISNVLQTIPSLALLAMLIPL 78

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AIFA+F   +  +  + Y    ++  +L E +R    S  Q+ + 
Sbjct: 79  LGVGI--------KPAIFALFLYSIMPILRNTYTGFRSVDLNLIEGARGMGYSTRQRLFL 130

Query: 183 LGVPFSMPGLVWNMMMS 199
           + +P S P ++  +  +
Sbjct: 131 IQLPLSFPYIMSGIRTT 147



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V +I+  ++ IP+GI++       I+S +   + +L   P+     +++  +       
Sbjct: 27  FVSVILGCLVAIPLGIFLAGNRVKFINSIVFMISNVLQTIPSLALLAMLIPLLGVG---- 82

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   IL N   G  +   +  E A     +  +    I LP  FPY ++
Sbjct: 83  IKPAIFALFLYSIMPILRNTYTGFRSVDLNLIEGARGMGYSTRQRLFLIQLPLSFPYIMS 142

Query: 509 GAITA 513
           G  T 
Sbjct: 143 GIRTT 147


>gi|325284803|ref|YP_004264266.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
 gi|324316292|gb|ADY27406.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
          Length = 284

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 13/194 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+L+   ++LL       L      L   L   L  +QS+P + F+ F +++F    
Sbjct: 89  SLRRVLTGYALALLVGGGLGVLMGIWAPLRATLGAYLTGIQSVPSIAFVPFAILFFGLN- 147

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  E A +  +    +  +  ++  +L N+P  L    R+   SG      + +P 
Sbjct: 148 -------ERAVLAVVILEALIPVALAVSGALLNVPPALRVAGRTLGASGPALTLRVLLPA 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  + S  W  ++  E+++ G        +G  + +     ++  +L  +L 
Sbjct: 201 ALPSVLGGLRTAWSFAWRALIGGELLIAGAGS-----LGEQLEVGRNTANVALVLATILI 255

Query: 248 MLGVIFLYDQLLFR 261
           +  +  L+D LL R
Sbjct: 256 IGLIGGLFDALLRR 269



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 10/218 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
              W  I Y +     QD   ++     ++ RV+    +A ++   +G+ +G    + + 
Sbjct: 62  SAVWAEISYGLWGTGPQD-GKLMISVLGSLRRVLTGYALALLVGGGLGVLMGIWAPLRAT 120

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  +   + + P+  F P  +             +  ++I      +   V       P 
Sbjct: 121 LGAYLTGIQSVPSIAFVPFAILFFGL----NERAVLAVVILEALIPVALAVSGALLNVPP 176

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +    +   +G      ++LP   P  + G  TA   AW A I  E+   G       
Sbjct: 177 ALRVAGRTLGASGPALTLRVLLPAALPSVLGGLRTAWSFAWRALIGGELLIAG-----AG 231

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            LG  +       +   V+  +LI+       +  L  
Sbjct: 232 SLGEQLEVGRNTANVALVLATILIIGLIGGLFDALLRR 269


>gi|255261514|ref|ZP_05340856.1| binding-protein-dependent transport systems inner membrane
           component [Thalassiobium sp. R2A62]
 gi|255103849|gb|EET46523.1| binding-protein-dependent transport systems inner membrane
           component [Thalassiobium sp. R2A62]
          Length = 280

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 9/179 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +I       V I       ++  + P    +AA P     P+ V        +   
Sbjct: 92  LGGYVIGGFAAFGVAILADRSEFLTRGVLPVGSFMAALPIVGIAPIFVKWFGSDWESKAA 151

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++++ F     IL N +AG        +++  ++    W     + LP   P+   G 
Sbjct: 152 VVTVMVFF----PILVNTVAGLRDTTTMQRDLMRTYGAGYWPTLFKLRLPAALPFIFNGL 207

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A   A   +IV+E          T G+G  I+ S    +   V   ++I        
Sbjct: 208 KIATTLALIGAIVAEFFGS-----PTVGMGFRISTSFGVLALDLVWAEIVIAALTGSLF 261



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 95/260 (36%), Gaps = 24/260 (9%)

Query: 23  LAFVLVIGIINILLHGIQ-------ETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLS 74
           +   ++ G+ ++L+  +           +PR       +  ++ +L     +T L+  L 
Sbjct: 34  IVIPVIFGVTSLLMWELWVIGFDVKPVFLPRPTEIAARLVSELPTLWADFKQTILKGALG 93

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             VI     F  A LA +S  L   ++P+   M ++PI+G     V +F + +  K    
Sbjct: 94  GYVIGGFAAFGVAILADRSEFLTRGVLPVGSFMAALPIVGIAPIFVKWFGSDWESKAA-- 151

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +     + +  +    L +      ++ R++    W   + L +P ++P +  
Sbjct: 152 ------VVTVMVFFPILVNTVAGLRDTTTMQRDLMRTYGAGYWPTLFKLRLPAALPFIFN 205

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ +      + +E         P  G+G  I+ +     L  +   ++       L
Sbjct: 206 GLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSFGVLALDLVWAEIVIAALTGSL 260

Query: 255 Y---DQLLFRPMIVWSNKFR 271
           +     L+ R M  W    R
Sbjct: 261 FYGAVTLIERGMTFWHPSQR 280


>gi|291616804|ref|YP_003519546.1| YehY [Pantoea ananatis LMG 20103]
 gi|291151834|gb|ADD76418.1| YehY [Pantoea ananatis LMG 20103]
          Length = 393

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 16/242 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI-SLLFTFV 85
           LV+ ++  +L      +   D + ++    +  S+   A    L +L+A V+ +LL  F 
Sbjct: 145 LVLNLLVWILPLWLLFSGQLDDLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFP 204

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--------GKVIGAELA 137
              +  +       +  +L+++Q++P +      +     L          G        
Sbjct: 205 LGVVLYRRSGWQSSVFGVLNVVQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAP 264

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    +  +  S+   L  +P D+ E +R   LSG Q+F+ + VP ++P  +  + 
Sbjct: 265 ALIALVLYALLPLVRSVVTGLQQVPPDVRESARGMGLSGRQQFFAVEVPLALPVWLSGIR 324

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           + +       V + +I  G       G G+ I   +    L  +L  ++ ++ +    D 
Sbjct: 325 VVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA 377

Query: 258 LL 259
           L 
Sbjct: 378 LF 379



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
              +  +    +V  + + + +      +  +  +   Q V     L  +T+      ++
Sbjct: 139 RRRLWQLVLNLLVWILPLWLLFSGQLDDLSLLKEYANRQSVFDAALLRHLTLL--AATVL 196

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS----------CVSYYH 445
            A +I  P+G+ +  R    S +     ++   P+   F L+++              + 
Sbjct: 197 PALLIAFPLGVVLYRRSGWQSSVFGVLNVVQTVPSVALFGLLIAPLAGLAKRFPWAGAWG 256

Query: 446 LNPNLWLSLLM--IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           ++       L+  +      ++ +V+ G    P D +E A    ++G + +  + +P   
Sbjct: 257 ISGIGMAPALIALVLYALLPLVRSVVTGLQQVPPDVRESARGMGLSGRQQFFAVEVPLAL 316

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +++G           ++V+ +   G       G GA I +     +   V+LGV+ + 
Sbjct: 317 PVWLSGIRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSNALDLVLLGVIPVI 369

Query: 564 CFVLALNRFLWHPLYLYGTRC 584
              + L+      L     R 
Sbjct: 370 AMAVTLDALF-RMLISLLERK 389


>gi|229093896|ref|ZP_04224989.1| ABC transporter permease protein [Bacillus cereus Rock3-42]
 gi|228689501|gb|EEL43313.1| ABC transporter permease protein [Bacillus cereus Rock3-42]
          Length = 244

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWDLFLSKWMDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|239818092|ref|YP_002947002.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
 gi|239804669|gb|ACS21736.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus S110]
          Length = 294

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 91/251 (36%), Gaps = 17/251 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----- 384
              +    +R S +       +V  + +   W      + H+       ++         
Sbjct: 26  RAHEDGLRRRESMLRIAVPAGIVIALLLAWEWMVRANNIPHYILPAPSLILRTLFDNWGS 85

Query: 385 ------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
                  T+   ++ +  A +  + + I       +   + P A +L           + 
Sbjct: 86  LSSALWFTVKLTLLALGAAIVGGVLLAIAFALFKWVEIGLFPIAVILQ----VTPIIAIA 141

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +  Y  +    L L       + IL N + G  +  ++ +++   +  + W+ +RY++
Sbjct: 142 PLILIYVSSTTAALLLCAWIVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLL 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   PY++ G   A G +   ++V+E  +      + TGL + I ES+ +   P +   
Sbjct: 202 APSALPYFMAGLKIAGGLSLIGAVVAEFTAG--TAGKETGLASRILESSFRTEIPMMFAA 259

Query: 559 VLIMCCFVLAL 569
           +L++    + +
Sbjct: 260 LLLVSLLGIVI 270



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 23  LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   L++    ++  + I    +P   + +  +  +  SL      T    L A+  +++
Sbjct: 47  IVIALLLAWEWMVRANNIPHYILPAPSLILRTLFDNWGSLSSALWFTVKLTLLALGAAIV 106

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A   A  + + + L PI  I+Q           ++    L    V     A +  
Sbjct: 107 GGVLLAIAFALFKWVEIGLFPIAVILQ--------VTPIIAIAPLILIYVSSTTAALLLC 158

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +    + +  +    L +   +L ++ + ++ S WQ F YL  P ++P  +  + ++  
Sbjct: 159 AWIVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGG 218

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E      T     G+ S I  +    ++  +  A+L +  +  + 
Sbjct: 219 LSLIGAVVAEF--TAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVI 270


>gi|194333464|ref|YP_002015324.1| binding-protein-dependent transport systems inner membrane
           component [Prosthecochloris aestuarii DSM 271]
 gi|194311282|gb|ACF45677.1| binding-protein-dependent transport systems inner membrane
           component [Prosthecochloris aestuarii DSM 271]
          Length = 257

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT     +  +I ++     G+ + +        +P+   L + P   F PL++      
Sbjct: 64  ITFIEATLGFVIGNVFGTVCGLALWYSNTAFRIARPYIIALGSAPIFAFAPLLIIWFGTG 123

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  SL  +F      L     GA+   +D   +  +F  T  + +R ++ P    
Sbjct: 124 IFSKVMIASLSTVFIA----LLQSYTGAADVSDDHLRLMKTFGATKNQMFRKVVAPSSIV 179

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           + ++      G A   + + E  S       + GLG  I  ++       V+ G+L++  
Sbjct: 180 WVMSAYRMNVGFAILGAFIGEYIS------SSYGLGHLILVASGLFDISLVLCGILMLVL 233

Query: 565 FVLAL 569
             L L
Sbjct: 234 IALIL 238



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SLP   S T +      VI  +F  V       S     +  P +  + S PI  F   
Sbjct: 56  GSLPTDFSITFIEATLGFVIGNVFGTVCGLALWYSNTAFRIARPYIIALGSAPIFAFAPL 115

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      KV+ A L+ +F              Y    ++  D   + ++F  +  Q
Sbjct: 116 LIIWFGTGIFSKVMIASLSTVFIA--------LLQSYTGAADVSDDHLRLMKTFGATKNQ 167

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +  P S+  ++    M++          E I          G+G  I +A    D+
Sbjct: 168 MFRKVVAPSSIVWVMSAYRMNVGFAILGAFIGEYISSS------YGLGHLILVASGLFDI 221

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             +L  +L ++ +  +    + +
Sbjct: 222 SLVLCGILMLVLIALILTWAVGK 244


>gi|289549918|ref|YP_003470822.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCD [Staphylococcus lugdunensis HKU09-01]
 gi|315659453|ref|ZP_07912315.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
 gi|289179450|gb|ADC86695.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCD [Staphylococcus lugdunensis HKU09-01]
 gi|315495436|gb|EFU83769.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           lugdunensis M23590]
          Length = 226

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           + +   L     +  L  +  ++ + +         A+ ++L   ++ I +++Q++P + 
Sbjct: 14  STNFGYLMGLFFKHLLMSVYGVLFASIVGIPIGIFIARFKKLAWPVITIANVIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLALGLG--------PTTVVVTVFLYGLLPIIKNTYTGIVEVDANIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TSNQVLRMIELPLSLSVIIGGIRIA-------LVVAVGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D  A + 
Sbjct: 179 STDGTAFIL 187



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + H+   +  Y++ L    +   V  ++ ASI+ IP+GI+I     ++  +   A ++  
Sbjct: 9   LAHYYSTNFGYLMGLFFKHLLMSVYGVLFASIVGIPIGIFIARFKKLAWPVITIANVIQT 68

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            PA     +++  +          + + +       I+ N   G      + K+      
Sbjct: 69  VPAIAMLAILMLALGLGPTT----VVVTVFLYGLLPIIKNTYTGIVEVDANIKDAGKGMG 124

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +T  +  R I LP      + G   A   A     +     
Sbjct: 125 MTSNQVLRMIELPLSLSVIIGGIRIALVVAVGIVAIGSFIG 165


>gi|288957391|ref|YP_003447732.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288909699|dbj|BAI71188.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 305

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 9/183 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+   ++       V I     P ++  + P   L +A P     P++V    +   
Sbjct: 111 LTSVLRGSVMGCGAGFLVAILADRVPFLARGLLPLGNLASAIPVVGIAPIMVMWFGFDWQ 170

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + +++  T + +L N +AG         ++  S+          + LP   P+ 
Sbjct: 171 SK----AAVIVVMTFFPMLINTLAGLGNSERIQLDLMRSYGAGYGTTLVKLRLPNALPFL 226

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G       A   +IV+E            G+G  I+    + +   V   + +     
Sbjct: 227 FNGLKINSTLALIGAIVAEFFG-----TPVVGMGFRISTEVARMNLDIVWATIAVAALTG 281

Query: 567 LAL 569
             L
Sbjct: 282 SGL 284



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 79/207 (38%), Gaps = 18/207 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +L   V+     F+ A LA +   L   L+P+ ++  +IP++G     V++F   + 
Sbjct: 111 LTSVLRGSVMGCGAGFLVAILADRVPFLARGLLPLGNLASAIPVVGIAPIMVMWFGFDWQ 170

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K           I     + M  +    L N  R   ++ RS+          L +P +
Sbjct: 171 SKAA--------VIVVMTFFPMLINTLAGLGNSERIQLDLMRSYGAGYGTTLVKLRLPNA 222

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L   + ++ +      + +E         P+ G+G  I+  +   +L  I++A + +
Sbjct: 223 LPFLFNGLKINSTLALIGAIVAEFFGT-----PVVGMGFRISTEVARMNLD-IVWATIAV 276

Query: 249 LGV----IFLYDQLLFRPMIVWSNKFR 271
             +    ++    LL R    W    R
Sbjct: 277 AALTGSGLYGALALLERVTTAWHPSMR 303


>gi|222153113|ref|YP_002562290.1| phosphate ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113926|emb|CAR42145.1| putative phosphate ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 311

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 15/189 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S L    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSALIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQIVVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L+ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 VRTLFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +  + PG+   ++  M+  +   +A +M+V    V+P     S I  A     +L + 
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPT----SLITPAATLTSVLTMG 266

Query: 243 YAMLTMLGV 251
                M  V
Sbjct: 267 IGNTVMGTV 275



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF 433
           +L  + +   +    ++  +IA+   I   +++    P   +  +QP  +LL   P+ V+
Sbjct: 81  ILGALPMISGSFLVTILSALIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVY 140

Query: 434 --------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                    P V +            + +L +      + F  +    A P  ++E + +
Sbjct: 141 GFIGLQIVVPFVRTLFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLKAVPRHYREASMA 199

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              T W+    ++L    P   T  I     A+  ++  ++       + T+     I  
Sbjct: 200 MGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPTS----LITP 255

Query: 546 STEKGSFPEVVLGVLIMCCF 565
           +    S   + +G  +M   
Sbjct: 256 AATLTSVLTMGIGNTVMGTV 275


>gi|325497215|gb|EGC95074.1| ABC transporter membrane protein [Escherichia fergusonii ECD227]
          Length = 217

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     +    + +++  +LL       L ++   R      + I ++  ++P L  L  
Sbjct: 20  LIYLGQQHLFLVFTSLFFALLIGVPSGILLSRPAARGFAEHAMQIFNVGNTLPPLAVLAL 79

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++             +  AI A+F + +  +  + Y  L  +P  L+E ++   ++ WQ
Sbjct: 80  AMIILGIG--------DTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQ 131

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           + + + +P + P ++  + ++         A    ++G +       G  I   I   D 
Sbjct: 132 RLYLVELPNAWPVMLSGIRIA--AAIIVGTAPLAFLIGASSY-----GELIFPGIYLNDF 184

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++           + D LL
Sbjct: 185 PTLILGATATALFALILDSLL 205



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFP 435
           +I+LG   +F V   +  A +I +P GI +  RP      +   Q+       P      
Sbjct: 20  LIYLGQQHLFLVFTSLFFALLIGVPSGILL-SRPAARGFAEHAMQIFNVGNTLPPLAVLA 78

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L +  +            + +   +   I+ N  AG +A P   KE A    +T W+   
Sbjct: 79  LAMIILGIGDT----PAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLY 134

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  ++G   A       + ++ +          +  G  I        FP +
Sbjct: 135 LVELPNAWPVMLSGIRIAAAIIVGTAPLAFLIG-------ASSYGELIFPGIYLNDFPTL 187

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LG      F L L+  L
Sbjct: 188 ILGATATALFALILDSLL 205


>gi|323224696|gb|EGA08968.1| hypothetical protein SEEM0055_21085 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 319

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 111 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 170

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 171 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 230

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 231 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 283

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 284 AIDLVLLGVIPVIALAVVIDALF 306



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 59  DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 118

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 119 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 176

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 177 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 236

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 237 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 289

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 290 LGVIPVIALAVVIDALF 306


>gi|260434043|ref|ZP_05788014.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417871|gb|EEX11130.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 305

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 9/220 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A           L    +  +      +        SL  +   T    +    I    
Sbjct: 63  FAIPATWAQDRPRLPAPHQVAIELWETTVQKKITSKRSLVYHGWVTLSATILGFAIGTGL 122

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A     SR + + ++P   + Q+IPI+      +V   ++    +I   + + +  
Sbjct: 123 GILLAVGIVHSRVMDLSVMPWAIVSQTIPIIALAPMIIVVLYSIGIQGIIPKAVISAYLS 182

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +   M + L +      ++ R++  S  Q FW L +P SMP L  ++ + ++ 
Sbjct: 183 F----FPVVVGMVKGLRSPDAMQLDLLRTYNASNSQVFWKLRLPASMPYLFASLKIGIAA 238

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                +  E+         + G+G+ +         + I 
Sbjct: 239 SLVGAIVGEL-----PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++   I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLVYHGWVTLSATILGFAIGTGLGILLAVGIVHSRVMDLSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVVLYSIGIQGIIPKAVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYNASNSQVFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPASMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|116249545|ref|YP_765383.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254193|emb|CAK03803.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 256

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 12/246 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R       + L     +S +L   W     G+   I    +  +       +  +++   
Sbjct: 4   RPLSLAETIGLPVIGALSLLLAWQWLVPALGIPAYIVPTPLAILRT--LGIEWRFLLSNA 61

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T     +  ++ + + + + I   + P + +   P   L    P     P+++     
Sbjct: 62  IPTWGEAGLGFLLGNSLAVIMAIAFVYNPRLQAAYFPVVLLFNTIPVLALAPIIILIFGL 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   ++      +  L N   G +       ++      +GW  +  +  P   
Sbjct: 122 G----MLPKVIIAALICFFPTLVNTARGLNLATASELDLMHVLSASGWETFWRLRAPRSA 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P        +       +IV E            GLGA I +ST       +   V++  
Sbjct: 178 PLLFASLRISATTCVIGAIVGEWIG------SNQGLGAVIIQSTFNYQAERLFAAVVLAS 231

Query: 564 CFVLAL 569
              +  
Sbjct: 232 FSGIVF 237



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 83/240 (34%), Gaps = 15/240 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            P  ++  I   +   L+ +L    +   L GI    VP  +  +  + ++   L   A 
Sbjct: 4   RPLSLAETIGLPVIGALSLLLAWQWLVPAL-GIPAYIVPTPLAILRTLGIEWRFLLSNAI 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T        ++      + A     + RL     P++ +  +IP+L      ++ F   
Sbjct: 63  PTWGEAGLGFLLGNSLAVIMAIAFVYNPRLQAAYFPVVLLFNTIPVLALAPIIILIFGLG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KVI A L   F            +  + L        ++      SGW+ FW L  P
Sbjct: 123 MLPKVIIAALICFF--------PTLVNTARGLNLATASELDLMHVLSASGWETFWRLRAP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S P L  ++ +S              +VG+ +    G+G+ I  +        +  A++
Sbjct: 175 RSAPLLFASLRIS------ATTCVIGAIVGEWIGSNQGLGAVIIQSTFNYQAERLFAAVV 228


>gi|291296262|ref|YP_003507660.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
 gi|290471221|gb|ADD28640.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus ruber DSM 1279]
          Length = 322

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 69/195 (35%), Gaps = 14/195 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V  ++   + +   + +     +   + P+A L ++ P     P++V  +     +  +
Sbjct: 134 LVGYLVGCSLGLVTALLVSRYVFLERGLLPYAALFSSIPIVALAPVLVKMIGIDWPSKAV 193

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++ + F     ++ N   G +       ++  S+     + +R++ LP   P+     
Sbjct: 194 IVAITVFF----PMVVNTFRGLTEVSPLSLDLMRSYAAGEVQQYRWLRLPNALPFIFNAL 249

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A   +IV E            GLG  I     +  F  V   +++     +A  
Sbjct: 250 KLGTTLAMIGAIVGEFFGANGQ-----GLGFRIQIEAGRFGFDIVWSAIIVASVIGIA-- 302

Query: 571 RFLWHPLYLYGTRCL 585
              W+ L  +  R  
Sbjct: 303 ---WYGLVAWLERRF 314



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 88/257 (34%), Gaps = 22/257 (8%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VHSLPQYASRTT-LRMLSAMV 77
           A + ++ ++      ++   VP  ++      L         L Q A +T  L  L   +
Sbjct: 79  AALTLLALVVTAEALLRAYQVPPGLIPTPSRVLSTLLEVRDVLLQDAFQTVVLEALVGYL 138

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +      V A L ++   L   L+P   +  SIPI+      V      +P K +   + 
Sbjct: 139 VGCSLGLVTALLVSRYVFLERGLLPYAALFSSIPIVALAPVLVKMIGIDWPSKAVIVAIT 198

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F         M  + ++ L  +     ++ RS+     Q++ +L +P ++P +   + 
Sbjct: 199 VFF--------PMVVNTFRGLTEVSPLSLDLMRSYAAGEVQQYRWLRLPNALPFIFNALK 250

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +  +      +  E            G+G  I +         +  A++    +   +  
Sbjct: 251 LGTTLAMIGAIVGEFFGANGQ-----GLGFRIQIEAGRFGFDIVWSAIIVASVIGIAWYG 305

Query: 258 L---LFRPMIVWSNKFR 271
           L   L R    W   FR
Sbjct: 306 LVAWLERRFTGWHVSFR 322


>gi|121609859|ref|YP_997666.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121554499|gb|ABM58648.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 250

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 75/201 (37%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTV 120
               +    +  + ++++L         ++   R +  V + + +I  +IP L  L  ++
Sbjct: 49  YLGLQHLELVAWSGLLAILVALPAGIALSRPSWRAVPEVCMQLFNIGGTIPTLAVLALSM 108

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                          + A+F ++   +  +  + Y  L  +P  L E +R   ++  Q  
Sbjct: 109 TLLGIGI--------VPAVFGLWAVTLLPIVRNTYAGLRAVPPHLLEAARGMGMTPAQVL 160

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P ++  +   +  +++        + +I  G       G+G  I   +   DL  
Sbjct: 161 WRVQLPNALFVICGGIRTALAICVGSAPLAFLIGAG-------GLGELIFTGMALDDLPM 213

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L   +    +  L D L+ +
Sbjct: 214 MLAGAIPTALIAVLLDFLIGQ 234



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 77/252 (30%), Gaps = 13/252 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +    +  L      ++  V   + ++     +          + +LG   +  V   
Sbjct: 2   IPARSGRAAALGRMAPALLLLVLAALLYRLWSSGMAAEILTHRDDICYLGLQHLELVAWS 61

Query: 394 IIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
            ++A ++ +P GI +       +         +    P      L ++ +    +     
Sbjct: 62  GLLAILVALPAGIALSRPSWRAVPEVCMQLFNIGGTIPTLAVLALSMTLLGIGIVPAVFG 121

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  + +      I+ N  AG  A P    E A    +T  +    + LP        G  
Sbjct: 122 LWAVTLL----PIVRNTYAGLRAVPPHLLEAARGMGMTPAQVLWRVQLPNALFVICGGIR 177

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA      ++ ++ +   G       GLG  I         P ++ G +      + L+ 
Sbjct: 178 TALAICVGSAPLAFLIGAG-------GLGELIFTGMALDDLPMMLAGAIPTALIAVLLDF 230

Query: 572 FLWHPLYLYGTR 583
            +    Y    R
Sbjct: 231 LIGQAQYHLVPR 242


>gi|148257318|ref|YP_001241903.1| putative glycine betaine/carnitine/choline ABC transporter
           permease/substrate binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146409491|gb|ABQ37997.1| putative glycine betaine/carnitine/choline ABC transporter
           (permease and substrate binding protein) [Bradyrhizobium
           sp. BTAi1]
          Length = 515

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 82/213 (38%), Gaps = 21/213 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  L  Y        ++A+ + L  +F  A LA     L  +L+ I  ++Q++P L  L 
Sbjct: 10  LSHLADYLGSHLRVSIAALALGLAVSFPLALLARNRPTLRNLLLGIASVVQTVPGLALLA 69

Query: 118 FTVV-----------YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                          +F   +        L A+ A+    +  +  +    L  +   L 
Sbjct: 70  LFYPLLLALAALTLRWFGLSFSA---FGFLPAVLALALYSMLPVLRNTITGLNGVDPGLI 126

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E ++   ++  Q    + +P ++P ++  +  +    W    A+    +G T      +G
Sbjct: 127 EAAKGVGMTERQALLMVELPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LG 179

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +YI   ++ Q+ + +++  +    +    DQLL
Sbjct: 180 NYIFAGLQTQNWVLVMFGCVAAAVLALAVDQLL 212



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 32/210 (15%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++   + + L  +     +  RV +  + +   +  P+ +    RP + + +   A ++ 
Sbjct: 1   MSDPRFAEALSHLADYLGSHLRVSIAALALGLAVSFPLALLARNRPTLRNLLLGIASVVQ 60

Query: 427 AFPANV------------------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
             P                     +F L  S   +      L   L +   +   +L N 
Sbjct: 61  TVPGLALLALFYPLLLALAALTLRWFGLSFSAFGF------LPAVLALALYSMLPVLRNT 114

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           I G +       E A    +T  +    + LP   P  + G  TA    W     +    
Sbjct: 115 ITGLNGVDPGLIEAAKGVGMTERQALLMVELPLALPVIMAGIRTAA--VWVIGTATLSTP 172

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            G        LG YI    +  ++  V+ G
Sbjct: 173 IGQTS-----LGNYIFAGLQTQNWVLVMFG 197


>gi|4761214|gb|AAD29278.1|AF112365_1 ProZL [Streptomyces coelicolor A3(2)]
          Length = 258

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 27/206 (13%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ L   +   L  +S   G V       + +IP L  +  
Sbjct: 55  QQLLADAYQHASAVFQCMVVATLLGVLIGVLTYRSDWAGNVATLSTSAILTIPSLAMIGL 114

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          + A+    +  +  +    L  +   L + ++   +S   
Sbjct: 115 LIPILGLGVPP--------TVTALTLYGLLPIVRNSIVGLRGVDPALVDAAKGIGMSRPA 166

Query: 179 KFWYLGVPFSMPGLVWNMMMS----MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +   + +P + P ++  + +S    M        AS            PG+G+ I   I 
Sbjct: 167 RLLRVELPLAWPPILTGIRVSTQMLMGIALIAAYAS-----------GPGLGNEIFRGIA 215

Query: 235 EQD----LLAILYAMLTMLGVIFLYD 256
                  L  +L   L ++ +  L+D
Sbjct: 216 SLGSKNALNQVLAGTLGIIVLALLFD 241



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+++ + +G+         +        +   P+     L++  +        
Sbjct: 68  VFQCMVVATLLGVLIGVLTYRSDWAGNVATLSTSAILTIPSLAMIGLLIPILGLGVPPTV 127

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L+L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 128 TALTLYGLL----PIVRNSIVGLRGVDPALVDAAKGIGMSRPARLLRVELPLAWPPILTG 183

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       ++++  AS   +      +   IA    K +  +V+ G L +    L  
Sbjct: 184 IRVSTQMLMGIALIAAYASGPGLGNE---IFRGIASLGSKNALNQVLAGTLGIIVLALLF 240

Query: 570 N 570
           +
Sbjct: 241 D 241


>gi|53717677|ref|YP_106663.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia pseudomallei K96243]
 gi|53724237|ref|YP_104204.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|254175302|ref|ZP_04881963.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254194580|ref|ZP_04901011.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|254201276|ref|ZP_04907640.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|52208091|emb|CAH34021.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia pseudomallei K96243]
 gi|52427660|gb|AAU48253.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|147747170|gb|EDK54246.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|160696347|gb|EDP86317.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|169651330|gb|EDS84023.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 285

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  I  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLLQVWVTLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 256 MIVLAVVALAADFLLTR 272



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 259 LAVVALAADFLLTRLEKRLLKW 280


>gi|15894752|ref|NP_348101.1| proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum ATCC 824]
 gi|15024418|gb|AAK79441.1|AE007658_11 Proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum ATCC 824]
 gi|325508890|gb|ADZ20526.1| Proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum EA 2018]
          Length = 218

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+++S++          K RR    ++ I   ++ +P L  L   +            
Sbjct: 32  LLALMVSIVIGVPLGYACVKYRRYENAILIIFQSLRIVPSLAILILLIPIMGIGLRP--- 88

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  +    L   P  + E +    ++  Q    +  P +MP +
Sbjct: 89  -----AMTALVLLSIPPILMNTASGLEETPAFMLETAYGMGMTEKQVLLKVKFPLAMPMI 143

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +M      +VAS  +    + I   G+G  I   +       IL   +++  + 
Sbjct: 144 LTGIKTAM----IEIVASATLS---SKIGAGGLGDIIFTGLALNRTDLILIGGISVAALS 196

Query: 253 FLYDQLL 259
            +   LL
Sbjct: 197 IIAGVLL 203



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++++ +I +P+G          + I    Q L   P+     L++  +         
Sbjct: 32  LLALMVSIVIGVPLGYACVKYRRYENAILIIFQSLRIVPSLAILILLIPIMGIGLRPAMT 91

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L LL    +   IL N  +G    P    E A    +T  +    +  P   P  +TG 
Sbjct: 92  ALVLL----SIPPILMNTASGLEETPAFMLETAYGMGMTEKQVLLKVKFPLAMPMILTGI 147

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA      ++ +S     G       GLG  I           +++G + +    +   
Sbjct: 148 KTAMIEIVASATLSSKIGAG-------GLGDIIFTGLALNRTDLILIGGISVAALSIIAG 200

Query: 571 RFL 573
             L
Sbjct: 201 VLL 203


>gi|182437891|ref|YP_001825610.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326778527|ref|ZP_08237792.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178466407|dbj|BAG20927.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326658860|gb|EGE43706.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 245

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     + +++I L   F  A LA + RR    ++ +  ++ ++P L   + 
Sbjct: 23  QELTDATVQHIGITVVSVLIGLAVAFPLALLARRGRRFAGPVLGLTTVLYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P +  + +R       +
Sbjct: 83  LLPLFGL--------SAALVVTGLVLYSLTILVRNILAGLEAVPEEARDAARGMGYGPGR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + M+        V++  +    +++   G+G+ I  A+     
Sbjct: 135 LLWEVELPLALPAVMAGLRMA-------TVSTVALTTVGSLVGKGGLGNLIEDALPSFFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AQVLTAAV 195



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 11/156 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I   +  P+ +        +  +     +L   P+   F L++            
Sbjct: 37  VVSVLIGLAVAFPLALLARRGRRFAGPVLGLTTVLYTVPSLAMFSLLLPLFGLSAALVVT 96

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      ++ N++AG  A P + ++ A        R    + LP   P  + G 
Sbjct: 97  GLVLYSLTI----LVRNILAGLEAVPEEARDAARGMGYGPGRLLWEVELPLALPAVMAGL 152

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             A       ++ +   +     +   GLG  I ++
Sbjct: 153 RMA-------TVSTVALTTVGSLVGKGGLGNLIEDA 181


>gi|167560949|ref|ZP_02353865.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
 gi|167568209|ref|ZP_02361083.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 284

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 85  LLLQVWVTLEETIAGFLIGSVAGVFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFV 144

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 145 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 200

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 201 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 254

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 255 MIVLAVVALAADFLLTR 271



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 92  TLEETIAGFLIGSVAGVFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFVIALGLGM 151

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 152 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 203

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 204 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 257

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 258 LAVVALAADFLLTRLEKRLLKW 279


>gi|114769053|ref|ZP_01446679.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [alpha proteobacterium HTCC2255]
 gi|114549970|gb|EAU52851.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [alpha proteobacterium HTCC2255]
          Length = 279

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 93/275 (33%), Gaps = 14/275 (5%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            +W F + L+  V  L      +       F+ L       + + I W   V G  +   
Sbjct: 1   MTWVFLALLTWIVLWLINI--QLAKIEANRFINLLVPALFGFSILILWEGFVRGFNVSPI 58

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFR--VVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                  +    +   L ++W+  +  F    +   +I  I      + +     +   +
Sbjct: 59  LLPPPSAIA-VRFSGSLSILWIDFVQTFIKGALSGYVIGCIAAFITAVAVDKSNFLKRGL 117

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P    +AA P     P++V    +   +    + +++ F     +L N +AG +A  N 
Sbjct: 118 LPVGNFVAALPIIGMAPILVMWFGFDWHSKAAVVVVMVFF----PMLVNTVAGLNAKDNI 173

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             ++  ++  + W+    + LP   P+   G       A   +IVSE          T G
Sbjct: 174 QHDLMKTYGASYWQNLLKLSLPAAMPFIFNGLKICTTLALIGAIVSEFFGS-----PTRG 228

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G  I+    + S   V   + +      A    +
Sbjct: 229 MGFRISTEVGRLSLDMVWAEITVAALAGSAFYGLM 263



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 22/246 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           +I  N F  L    + G   ++L         +    +P      V  +  +  L     
Sbjct: 23  KIEANRFINLLVPALFGFSILILWEGFVRGFNVSPILLPPPSAIAVRFSGSLSILWIDFV 82

Query: 67  RTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T ++  LS  VI  +  F+ A    KS  L   L+P+ + + ++PI+G     V++F  
Sbjct: 83  QTFIKGALSGYVIGCIAAFITAVAVDKSNFLKRGLLPVGNFVAALPIIGMAPILVMWFGF 142

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +  K     +   F         M  +    L        ++ +++  S WQ    L +
Sbjct: 143 DWHSKAAVVVVMVFF--------PMLVNTVAGLNAKDNIQHDLMKTYGASYWQNLLKLSL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + +  +      + SE         P  G+G  I+  +    L  +++A 
Sbjct: 195 PAAMPFIFNGLKICTTLALIGAIVSEFFGS-----PTRGMGFRISTEVGRLSLD-MVWAE 248

Query: 246 LTMLGV 251
           +T+  +
Sbjct: 249 ITVAAL 254


>gi|121609205|ref|YP_997012.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121553845|gb|ABM57994.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 243

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLT 117
             +   + +    +  A  ++++         ++  +R   V++ +L++ Q+IP L  L 
Sbjct: 38  SDIAYQSIQLMTMVAIAGALAIVAAVPLGICMSRPAQRRAAVIMQVLNVGQAIPKLALLA 97

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +               + AIF ++ + +  +  + Y+ L  +PR L E +    ++  
Sbjct: 98  LAMSVLGIG--------TVPAIFGLWVATLLPIAQNTYEGLRAVPRALIEAATGMGMTPL 149

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSG 202
           Q  W + +P ++  +   +  +++ 
Sbjct: 150 QILWRVELPNALYVIFAGIRTALAI 174



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 14/197 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-RPHISSKIQPFAQLLAAFPANVFFPLV 437
           + +     M  V +   +A +  +P+GI +       ++ I     +  A P      L 
Sbjct: 40  IAYQSIQLMTMVAIAGALAIVAAVPLGICMSRPAQRRAAVIMQVLNVGQAIPKLALLALA 99

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +S +        +     +   T   I  N   G  A P    E A+   +T  +    +
Sbjct: 100 MSVLGIG----TVPAIFGLWVATLLPIAQNTYEGLRAVPRALIEAATGMGMTPLQILWRV 155

Query: 498 ILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP        G  TA       A +   +   G   L  TG+        +   F  ++
Sbjct: 156 ELPNALYVIFAGIRTALAITVGTAPLAFLIGGGGLGELIFTGI--------DLNDFTMLL 207

Query: 557 LGVLIMCCFVLALNRFL 573
            G + +    +  +  L
Sbjct: 208 AGAIPIALLAILTDAVL 224


>gi|116254133|ref|YP_769971.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258781|emb|CAK09887.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 268

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I + F P +   + P        P     PLVV    +  L       LL+   T + +L
Sbjct: 93  ILMDFVPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGLL----PKVLLVALVTFFPLL 148

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             ++ G  +   D  E+ +S   + WR +R   LP   PY+  G   +   A   +I +E
Sbjct: 149 VALLQGYESTDRDIAELLNSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAE 208

Query: 526 VASWGHIHLRTTGLGAYIAESTEK 549
            A          GLG YI  +   
Sbjct: 209 YAG------AARGLGIYILNAKNN 226



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 14/204 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L GI+ + +P     +V   L+  +L      T    L    +SL F F  + L      
Sbjct: 41  LSGIKPSILPAPSRIVVQGWLNREALISNTWPTLGATLGGFALSLAFAFAASILMDFVPF 100

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   L+PI    Q++P++      V++F      KV+   L   F         +  ++ 
Sbjct: 101 MRRALLPIFIASQTLPLVAIAPLVVLWFGFGLLPKVLLVALVTFF--------PLLVALL 152

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           Q   +  RD+ E+  S + S W+ F    +P S+P     + +S++      + +E    
Sbjct: 153 QGYESTDRDIAELLNSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAEYAG- 211

Query: 216 GDTVIPLPGIGSYIALAIKEQDLL 239
                   G+G YI  A       
Sbjct: 212 -----AARGLGIYILNAKNNFRPD 230


>gi|15901253|ref|NP_345857.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae TIGR4]
 gi|15903299|ref|NP_358849.1| phosphate ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111658593|ref|ZP_01409250.1| hypothetical protein SpneT_02000268 [Streptococcus pneumoniae
           TIGR4]
 gi|116516273|ref|YP_816698.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae D39]
 gi|148985647|ref|ZP_01818801.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|148993042|ref|ZP_01822636.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|148997547|ref|ZP_01825152.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|149007331|ref|ZP_01830989.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|149011639|ref|ZP_01832835.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|149019354|ref|ZP_01834716.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|168483976|ref|ZP_02708928.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486093|ref|ZP_02710601.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1087-00]
 gi|168489563|ref|ZP_02713762.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae SP195]
 gi|168493302|ref|ZP_02717445.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575858|ref|ZP_02721773.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae MLV-016]
 gi|169833586|ref|YP_001694834.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684358|ref|YP_001836105.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae CGSP14]
 gi|194396785|ref|YP_002038047.1| phosphate ABC transporter permease [Streptococcus pneumoniae G54]
 gi|225854846|ref|YP_002736358.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae JJA]
 gi|225857034|ref|YP_002738545.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae P1031]
 gi|225859164|ref|YP_002740674.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 70585]
 gi|225860821|ref|YP_002742330.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237649325|ref|ZP_04523577.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CCRI 1974]
 gi|237820944|ref|ZP_04596789.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298229508|ref|ZP_06963189.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255459|ref|ZP_06979045.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502650|ref|YP_003724590.1| phosphate ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|303254554|ref|ZP_07340658.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS455]
 gi|303258994|ref|ZP_07344973.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|303261678|ref|ZP_07347625.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264347|ref|ZP_07350267.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS397]
 gi|303265854|ref|ZP_07351751.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS457]
 gi|303268187|ref|ZP_07353986.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS458]
 gi|307068053|ref|YP_003877019.1| phosphate ABC transporter permease [Streptococcus pneumoniae AP200]
 gi|307127032|ref|YP_003879063.1| phosphate ABC transporter permeae PstC [Streptococcus pneumoniae
           670-6B]
 gi|14972887|gb|AAK75497.1| putative phosphate ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458895|gb|AAL00060.1| ABC transporter membrane-spanning permease - phosphate transport
           [Streptococcus pneumoniae R6]
 gi|116076849|gb|ABJ54569.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae D39]
 gi|147756602|gb|EDK63643.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|147761135|gb|EDK68103.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|147764070|gb|EDK71002.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|147922128|gb|EDK73250.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928243|gb|EDK79260.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|147931224|gb|EDK82203.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|168996088|gb|ACA36700.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172042790|gb|EDT50836.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629692|gb|ACB90640.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae CGSP14]
 gi|183570723|gb|EDT91251.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC1087-00]
 gi|183572000|gb|EDT92528.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae SP195]
 gi|183576625|gb|EDT97153.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578352|gb|EDT98880.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae MLV-016]
 gi|194356452|gb|ACF54900.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae G54]
 gi|225721673|gb|ACO17527.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 70585]
 gi|225723073|gb|ACO18926.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae JJA]
 gi|225724837|gb|ACO20689.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae P1031]
 gi|225727195|gb|ACO23046.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238245|gb|ADI69376.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301794440|emb|CBW36874.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
 gi|301800265|emb|CBW32885.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae OXC141]
 gi|301802140|emb|CBW34877.1| putative phosphate ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302598522|gb|EFL65564.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS455]
 gi|302637258|gb|EFL67746.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|302639937|gb|EFL70393.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|302642266|gb|EFL72614.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS458]
 gi|302644589|gb|EFL74839.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS457]
 gi|302646159|gb|EFL76386.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae BS397]
 gi|306409590|gb|ADM85017.1| ABC-type phosphate transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306484094|gb|ADM90963.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae 670-6B]
 gi|327389585|gb|EGE87930.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA04375]
 gi|332073706|gb|EGI84185.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA17570]
 gi|332074721|gb|EGI85195.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA17545]
 gi|332074980|gb|EGI85452.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA41301]
 gi|332200841|gb|EGJ14913.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA41317]
 gi|332201850|gb|EGJ15920.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA47368]
 gi|332203229|gb|EGJ17297.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae GA47901]
          Length = 305

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 17/217 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-------TLDVHSLPQYASRTTLRMLS 74
                L++ ++ ++L  + +  +    V+ V I       T +  S    A    L    
Sbjct: 28  FACLSLIVILVAMILVFVAQKGLSTFFVNGVNIFDFLLGGTWNPSSKEFGALPMILGSFI 87

Query: 75  AMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
             ++S L    +A  AA      S +   +L P ++++  IP + +    L   V +  +
Sbjct: 88  VTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRS 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++ G   G  L+ I  +F   +  +TF    SL  +PR   E S +   + WQ  W + +
Sbjct: 148 VFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREASFAMGATRWQTIWRVIL 206

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 207 KAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P V S            +S+L +      + F       A P  ++E + +  
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGISVLFVMI-LPTVTFMTTDSLRAVPRYYREASFAMG 194

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            T W+    +IL        T  +     A+  ++  ++       + T+
Sbjct: 195 ATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|157147150|ref|YP_001454469.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895]
 gi|157084355|gb|ABV14033.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895]
          Length = 207

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 15/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +  + + +AM+++   +       A+  RL  +++ +  ++ SIP L      + +    
Sbjct: 17  QHLVLVGAAMLMAFAISLFLGITTARRPRLYALVMAVTGMIFSIPGLALFALLIPWLGIG 76

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                    L AI  +    +  +T ++      IP D+ E +R      W+    + +P
Sbjct: 77  M--------LPAIVGLTAYALMILTRNIATGFHAIPLDVREAARGMGYGAWRNLREVELP 128

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  + ++ +        +  I  G       G+G+ I   + ++    I     
Sbjct: 129 LALPFIITGLRIATTTLIGIATVAAYINAG-------GLGAIILAGLDQRYPEKIFIGGG 181

Query: 247 TMLGVIFLYDQLLFR 261
               +    D    R
Sbjct: 182 LTSLLAIGADLFFVR 196



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y D+L  +W   +    V   +++A  I + +GI    RP + + +     ++ + P   
Sbjct: 8   YDDILLALWQHLVL---VGAAMLMAFAISLFLGITTARRPRLYALVMAVTGMIFSIPGLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F L++  +    L   + L+   +      +  N+  G  A P D +E A       WR
Sbjct: 65  LFALLIPWLGIGMLPAIVGLTAYALMI----LTRNIATGFHAIPLDVREAARGMGYGAWR 120

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R + LP   P+ +TG   A       + V+   + G       GLGA I    ++   
Sbjct: 121 NLREVELPLALPFIITGLRIATTTLIGIATVAAYINAG-------GLGAIILAGLDQRYP 173

Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575
            ++ +G  +     +  + F   
Sbjct: 174 EKIFIGGGLTSLLAIGADLFFVR 196


>gi|306844871|ref|ZP_07477453.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306274700|gb|EFM56484.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 248

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQS 109
            P+  D  +L     +    +  A   S L     A    + +      +   +++I Q+
Sbjct: 39  TPVIYDRANLMTLTLQHLGLVALATFCSTLIAVAMAIFVTRRQGAEFLPLSRSLVNIGQT 98

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P +  L   V  F           +   + A+F   +  +  +    L ++P  + E +
Sbjct: 99  FPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAA 150

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++G Q+ + + +P +MP ++  + +S   G         +           +G  I
Sbjct: 151 RGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVI 203

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
              +   +L  +L   L +  +  L 
Sbjct: 204 IAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVAMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|239909234|ref|YP_002955976.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239799101|dbj|BAH78090.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 297

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 12/223 (5%)

Query: 343 MLDIFWFCVV--CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
            L   W C+     +A G    +       +       V      T  R V    +  + 
Sbjct: 58  FLLALWECLARAGVLAPGAVPPASRVAAALWELAASGEVFAEIGRTAGRAVAGFALGGLA 117

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            + +G   G  P     +   A+ L   P+    P+ +  +             +  F  
Sbjct: 118 GVLLGFGCGVFPGFGRAVGTTAEFLRPMPSVALIPIGILFLGLGFG----LCVAVAAFAC 173

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            W       AGA A   + ++ A ++ +       +++ P   P    G  T    A   
Sbjct: 174 CWPAYVAARAGAGAAGPELRDTARAYGLGRTESIVFVLAPAALPQIFAGLRTGLAVAVAV 233

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           ++ +E+A+  +      GLG++I E++  G    +  G++ + 
Sbjct: 234 AVTTEMAAAPN------GLGSFILEASMAGRPERMYAGIVAVG 270



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 18/237 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRM 72
           P    LL  V ++ +   L                V   L        +     RT  R 
Sbjct: 48  PAYIGLLFIVFLLALWECLARAGVLAPGAVPPASRVAAALWELAASGEVFAEIGRTAGRA 107

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++   +  L   +           G  +    + ++ +P +  +   +++    +     
Sbjct: 108 VAGFALGGLAGVLLGFGCGVFPGFGRAVGTTAEFLRPMPSVALIPIGILFLGLGFG---- 163

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +     +  W    +          +L + +R++ L   +   ++  P ++P +
Sbjct: 164 ----LCVAVAAFACCWPAYVAARAGAGAAGPELRDTARAYGLGRTESIVFVLAPAALPQI 219

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
              +   ++      V +EM    +      G+GS+I  A        +   ++ + 
Sbjct: 220 FAGLRTGLAVAVAVAVTTEMAAAPN------GLGSFILEASMAGRPERMYAGIVAVG 270


>gi|228917442|ref|ZP_04080992.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228842214|gb|EEM87312.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 244

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWDLFLNKWMDGSLWIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|118586961|ref|ZP_01544393.1| phosphate ABC transporter, permease [Oenococcus oeni ATCC BAA-1163]
 gi|118432583|gb|EAV39317.1| phosphate ABC transporter, permease [Oenococcus oeni ATCC BAA-1163]
          Length = 319

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 19/257 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++   L GI         V          +L   A    +      ++S L    +A  
Sbjct: 56  GLMAFTLDGINPLKFIFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIA 115

Query: 90  AAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAI 139
            A       S     ++ P+++++  IP + +    LT  V +    + G   G  LA  
Sbjct: 116 TALFMVELQSNWGKKIMQPVVELLVGIPSVVYGFIGLTVVVPFLRKTFGGSGFGI-LAGT 174

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  +T     +L N+P    E + +   + WQ  + + +  + PG++  ++  
Sbjct: 175 IVLFVMILPTITSLTVDALRNVPNHYRESALAIGATRWQMIYKVILRAATPGILTAVVFG 234

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPG-------IGSYIALAIKEQDLLAILYAMLTMLGVI 252
           M+  +   +A +M+ VG+  I   G       + S +   I      ++   +L  L ++
Sbjct: 235 MARAFGEALAVQMV-VGNAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLAML 293

Query: 253 FLYDQLLFRPMIVWSNK 269
            L   L F  +I +  K
Sbjct: 294 LLIMSLFFNLIIRFIGK 310



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 81/241 (33%), Gaps = 27/241 (11%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
             G + N  T      + +     +    ++ ++++++  P  I                
Sbjct: 71  IFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIATALFMVELQSNWGKK 130

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +QP  +LL   P+ V+  + ++ V       +      +    +++F      + +  +
Sbjct: 131 IMQPVVELLVGIPSVVYGFIGLTVVVPFLRKTFGGSGFGILAGTIVLFVMILPTITSLTV 190

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                 PN ++E A +   T W+    +IL    P  +T  +     A+  ++  ++   
Sbjct: 191 DALRNVPNHYRESALAIGATRWQMIYKVILRAATPGILTAVVFGMARAFGEALAVQMVVG 250

Query: 530 GH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                             + T G+G     S +      + + +LIM  F   + RF+  
Sbjct: 251 NAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLAMLLLIMSLFFNLIIRFIGK 310

Query: 576 P 576
            
Sbjct: 311 R 311


>gi|83951600|ref|ZP_00960332.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius nubinhibens ISM]
 gi|83836606|gb|EAP75903.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius nubinhibens ISM]
          Length = 280

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 87/266 (32%), Gaps = 10/266 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            +   +     +   + +        +  L         L I W  +V G+ I       
Sbjct: 2   IWVTFAIGFWLMAWWINIQIGRSGAPWAGLVMPALFGLTLLILWEGMVRGLGINPVLLPA 61

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
              +      ++  +      T+ +  +   ++     I  GI +   P +   + P   
Sbjct: 62  PSAIAQTFAANLPTLWGDLVQTVVKGALTGYVLGCGAAILTGIAVDRSPFLQRGLLPVGN 121

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F        N +AG     +  +++ 
Sbjct: 122 FVAALPIVGMAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLRDTDSMQRDLM 177

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    + LP   P+   G   A   A   +IV+E          T G+G  I
Sbjct: 178 RTYAASYPQTLLKLRLPAALPFIFNGLKIATTLALIGAIVAEFFGS-----PTRGMGFRI 232

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
           A S  + +   V   +L+      A 
Sbjct: 233 ATSVGQLALDMVWAEILVAAVVGSAF 258



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 88/242 (36%), Gaps = 16/242 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P +F L   +L  G++  L         P  I       L   +L     +T ++  L
Sbjct: 32  VMPALFGLTLLILWEGMVRGLGINPVLLPAPSAIAQTFAANLP--TLWGDLVQTVVKGAL 89

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  V+      +      +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 90  TGYVLGCGAAILTGIAVDRSPFLQRGLLPVGNFVAALPIVGMAPILVMWFGFDWQSKAAV 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F +          +    L +      ++ R++  S  Q    L +P ++P + 
Sbjct: 150 VVVMVFFPV--------LVNTVAGLRDTDSMQRDLMRTYAASYPQTLLKLRLPAALPFIF 201

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P  G+G  IA ++ +  L  +   +L    V  
Sbjct: 202 NGLKIATTLALIGAIVAEFFGS-----PTRGMGFRIATSVGQLALDMVWAEILVAAVVGS 256

Query: 254 LY 255
            +
Sbjct: 257 AF 258


>gi|254560854|ref|YP_003067949.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254268132|emb|CAX24008.1| ABC family transporter permease protein [Methylobacterium
           extorquens DM4]
          Length = 302

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L+   +  L     A      R +   L+P +   Q++PIL   
Sbjct: 88  SKRSLVYHAWVTLSATLTGFALGSLLGIALAIAIVHLRSVEASLMPWIVASQTVPILAVA 147

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V         ++   + A +  F    + +T  M + L    R   ++ R++  S 
Sbjct: 148 PIIIVALGAAGLTGLLPKAVIAAYLCF----FPVTVGMVKGLNAPDRIQRDLMRTYSASR 203

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P ++P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 204 GQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQA-----GLGARLLAGSYYG 258

Query: 237 DLLAIL 242
             + I 
Sbjct: 259 QTIQIW 264



 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   V          +++   +T+   +    + S++ I + I I     + + + P+  
Sbjct: 77  LSRSVLGVPLSSKRSLVYHAWVTLSATLTGFALGSLLGIALAIAIVHLRSVEASLMPWIV 136

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  +    L   L  +++  +   + +   ++ G +A     +++ 
Sbjct: 137 ASQTVPILAVAPIIIVALGAAGLTGLLPKAVIAAYLCFFPVTVGMVKGLNAPDRIQRDLM 196

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    +  P   PY       A   +   +IV+E+ +         GLGA +
Sbjct: 197 RTYSASRGQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQ-----AGLGARL 251

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 252 LAGSYYGQTIQIW 264


>gi|134294165|ref|YP_001117900.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134137322|gb|ABO53065.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 285

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETAIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 256 MIVLAVVALAADYLLTR 272



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETAIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 259 LAVVALAADYLLTRIEKRLLKW 280


>gi|331703485|ref|YP_004400172.1| phosphate ABC transporter permease [Mycoplasma mycoides subsp.
           capri LC str. 95010]
 gi|328802040|emb|CBW54194.1| Phosphate ABC transport system, permeasecomponent [Mycoplasma
           mycoides subsp. capri LC str. 95010]
          Length = 696

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 79/597 (13%), Positives = 191/597 (31%), Gaps = 77/597 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF LLA V+++G + I  + +       + V       D     +      T + +  +M
Sbjct: 35  IFVLLALVILLGFVMIKTNVLFNKQSFFEFVFGKNWNPDSKEFGILTITLMTLILIFISM 94

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    V + I+ ++  IP + F  F    +     L     
Sbjct: 95  LIAVPLTIFTSFFISEYLTLKSQKVTITIIKLLAGIPSVVFGLFAREQIGALFKLMGALS 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 155 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPFIYRDASLALGISKEKTTFNIIRKSATPK 214

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ M+      +A  MI        DT   + G            IG  +     
Sbjct: 215 IISAVILGMARVIGETMAIMMIAGNSTAWFDTNNGVSGFLFSSIRTLSSTIGLEMLENSS 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+            +     I      +L+  +KT+ 
Sbjct: 275 SLHESALYAIGMFLFILVFIINLLIL----------FVSNKNSISQKIHLLLFKNKKTHK 324

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           ++ +          +  N                         +  S ++ +  +  +  
Sbjct: 325 IKHVKLYQKQTLDQIITN-----------------RAENKLFKKIYSTIMLVLMWLSISF 367

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408
           V +   W     I N  +                    +   ++LI+   +  IP+ +  
Sbjct: 368 VIMFTFWIVFTTIFNGLSSLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFAIPLALAC 427

Query: 409 GF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFG 459
                       + +   +    L A+ P+ +F    +S    Y  L  +++ + + +  
Sbjct: 428 AIYLSEFANKNSYFAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASITMTI 487

Query: 460 TQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG--- 515
               +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A     
Sbjct: 488 VVLPMLIKNFEDALTSVPLSYREAAIALGLSKTKTLFKIVLPNALQAIITGTILAMARII 547

Query: 516 --GAWNASIVSEVASWGHIHLRTTGLG-----AYIAESTEKGSFPEVVLGVLIMCCF 565
              A     +     +      ++G         IA  +  G   ++   + ++   
Sbjct: 548 GESAPIYLTLGTAIKYPDRGFLSSGSTLTTGIYKIASESAPGQGNDIAWLMSLITII 604


>gi|217977348|ref|YP_002361495.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217502724|gb|ACK50133.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 260

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++      D   +     +T+   +  ++ A +  + + +       I     P A +L 
Sbjct: 43  LILQTLASDRAVLFPALFVTLDATLKALLAAVVGGVALAVLFAQSKWIERAFLPVAIVLQ 102

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++      +L+ +  +         + IL N   G ++   +  ++ + +
Sbjct: 103 VTPIIAIAPLLLV-----YLDASSAVLACAFLVAFFPILSNTALGLASVDRNLVDLFTLY 157

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + WR    +  P   PY++ G     G A   +I +E+A+              I E+
Sbjct: 158 GASRWRMLILLRAPSALPYFLAGLRIGGGLALVGAIAAELAAGASGKGAGLA--FRIVEA 215

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             + + P +   +L++C   +A+
Sbjct: 216 GYRLNIPRMFAALLLICLSGVAI 238



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 9/166 (5%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G     +P   + +  +  D   L      T    L A++ +++     A L A+S+ + 
Sbjct: 32  GTPPYVLPAPSLILQTLASDRAVLFPALFVTLDATLKALLAAVVGGVALAVLFAQSKWIE 91

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
              +P+  ++Q  PI+      +VY         + A  A +   F    + +  +    
Sbjct: 92  RAFLPVAIVLQVTPIIAIAPLLLVY---------LDASSAVLACAFLVAFFPILSNTALG 142

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           L ++ R+L ++   +  S W+    L  P ++P  +  + +     
Sbjct: 143 LASVDRNLVDLFTLYGASRWRMLILLRAPSALPYFLAGLRIGGGLA 188


>gi|83954417|ref|ZP_00963137.1| putative choline uptake ABC transporter permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841454|gb|EAP80624.1| putative choline uptake ABC transporter permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 390

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L   +  + +        P  ++       D  +     +R       ++ ++ L  
Sbjct: 141 ALLLAAVVGAMTVVLGSGALAPLSVMQEFAARRDAFA--SETTRHLWLAFGSLGMAGLIG 198

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFMNLYPGKVIGAELA--- 137
           F    L+ +   L   ++P+L  +Q+IP L         + +     PG           
Sbjct: 199 FPIGVLSHRKPALRSAILPVLSFLQTIPSLAMFGLMIPLLGWVGATVPGARSIGIAGIGF 258

Query: 138 --AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A  A+    +  +  +    L   P      +R   ++  Q+ W + +P  +P ++  
Sbjct: 259 APAFVALVLYSLLPVVGNTVAGLAATPPQALNAARGIGMTAAQRLWRVELPIGLPVILTG 318

Query: 196 MMM 198
           + +
Sbjct: 319 LRI 321



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +A +I  P+G+    +P + S I P    L   P+   F L++  + +   
Sbjct: 184 LWLAFGSLGMAGLIGFPIGVLSHRKPALRSAILPVLSFLQTIPSLAMFGLMIPLLGWVGA 243

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 S+             ++  +   ++ N +AG +A P      A    +T  +  
Sbjct: 244 TVPGARSIGIAGIGFAPAFVALVLYSLLPVVGNTVAGLAATPPQALNAARGIGMTAAQRL 303

Query: 495 RYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             + LP   P  +TG           A I   +   G       GL     +    G+ P
Sbjct: 304 WRVELPIGLPVILTGLRIVLVQNIGLAVIAGLIGGGGFGTFVFQGLNQTATDLILLGALP 363

Query: 554 EVVLGV---LIMCCFVLALNRF 572
            V L +   ++M   V    R 
Sbjct: 364 TVALALTAAIVMDILVDLTRRL 385


>gi|304394555|ref|ZP_07376474.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
 gi|303293216|gb|EFL87597.1| binding-protein-dependent transport systems inner membrane
           component [Ahrensia sp. R2A130]
          Length = 291

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 9/184 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   V    I+       V + +   P + + + P    +AA P     P++V    +  
Sbjct: 96  TFKAVFAGYILGCGSGFLVALAVDRSPFLKNGLMPLGNFVAALPVVGVAPIMVMWFGFDW 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +     + +++  T + +L N + G +A  +  +++  ++  + W+    + LP   P+
Sbjct: 156 QSK----AAVVVLMTFFPMLVNTVQGLAASDSMARDLMKTYASSWWQTLLKLRLPAAAPF 211

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                      A   +IV+E      +     G+G  I+    + +   V   + +    
Sbjct: 212 IFNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNIDMVWAEIAVAALA 266

Query: 566 VLAL 569
             A 
Sbjct: 267 GSAF 270



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 88/252 (34%), Gaps = 17/252 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               ++  ++   L+       P  ++    I     +L     +T   + +  ++    
Sbjct: 52  ATLFVIWELLVRGLNVPTVLLPPPSMIWERAINSGP-TLWADFQQTFKAVFAGYILGCGS 110

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            F+ A    +S  L   L+P+ + + ++P++G     V++F   +  K           +
Sbjct: 111 GFLVALAVDRSPFLKNGLMPLGNFVAALPVVGVAPIMVMWFGFDWQSKAA--------VV 162

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + M  +  Q L        ++ +++  S WQ    L +P + P +   + ++ + 
Sbjct: 163 VLMTFFPMLVNTVQGLAASDSMARDLMKTYASSWWQTLLKLRLPAAAPFIFNALKINSTL 222

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLL 259
                + +E         P+ G+G  I+  +   ++  +   +         +     L+
Sbjct: 223 ALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNIDMVWAEIAVAALAGSAFYGTVVLI 277

Query: 260 FRPMIVWSNKFR 271
            R +  W    R
Sbjct: 278 ERAVTFWHPAVR 289


>gi|228899414|ref|ZP_04063671.1| ABC transporter, permease [Bacillus thuringiensis IBL 4222]
 gi|228860171|gb|EEN04574.1| ABC transporter, permease [Bacillus thuringiensis IBL 4222]
          Length = 185

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 8/130 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T   +L  + IS++     A L   S  +     P+L   Q+IPI       V++F
Sbjct: 55  HLPATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWF 114

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                        + +        + +  + Y  L +  ++ EE+  ++  +    F  L
Sbjct: 115 GYTI--------WSKVVITVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKL 166

Query: 184 GVPFSMPGLV 193
            +P ++P   
Sbjct: 167 KLPSALPYFF 176



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 4/123 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T++ V++ + I+ ++ + + + +     +     P        P     PL V    Y 
Sbjct: 58  ATLYVVLIGVAISIVLGVGLAMLMNASNWMERAFYPLLVASQTIPITALAPLFVLWFGYT 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ +  T + I  N   G  +   +++E+  ++  T    +  + LP   P
Sbjct: 118 ----IWSKVVITVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALP 173

Query: 505 YYV 507
           Y+ 
Sbjct: 174 YFF 176


>gi|307637509|gb|ADN79959.1| Osmoprotection protein [Helicobacter pylori 908]
 gi|325996098|gb|ADZ51503.1| Osmoprotection protein [Helicobacter pylori 2018]
 gi|325997694|gb|ADZ49902.1| Osmoprotection protein [Helicobacter pylori 2017]
          Length = 522

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 12/217 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +    + Y++  F +   +Y I L       V +  +I  +  + +G+++ +     +
Sbjct: 1   MALKISVVKYLIKEF-HDRFIYFIDLIAQHFIIVALSGLIVLVFGVLIGVFVFYNSKARA 59

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P    L   P+   F L +  +     N  L L L  +      I+ +         
Sbjct: 60  FLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALKEAR 115

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +  + A          +  +      P  + G   A        ++  +A  G +    
Sbjct: 116 EEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VVMLVAMAGIGALIGAG 169

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               A I       +   +V G  I+  F +  ++F+
Sbjct: 170 GLGQA-IFRGLNTQNTTLLVAGSFIIALFSVLADQFV 205



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  + +I L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 33  VALSGLIVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 90

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 91  ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFRVRFLLAIPQ 144

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 145 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIALF 197

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 198 SVLADQFV 205


>gi|320010044|gb|ADW04894.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 239

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 69/175 (39%), Gaps = 15/175 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L +   +      ++++I L   F  A LA + R     ++ +  ++ ++P L   + 
Sbjct: 23  HELTEATVQHIWITAASVLIGLAVAFPLALLARRGRHFAGPVLGLTTVLYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P++  E +        +
Sbjct: 83  LLPLFGL--------SAALVVTGLVLYSLTILVRNILAGLEAVPQEAREAATGMGYGPVR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
             W + +P ++P L+  + ++        V++  +    +++   G+G+ I  A+
Sbjct: 135 LLWEVELPLALPALMAGLRIA-------TVSTVALTTVGSLVGKGGLGNLIEDAL 182



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 11/160 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     ++I   +  P+ +      H +  +     +L   P+   F L++        
Sbjct: 33  IWITAASVLIGLAVAFPLALLARRGRHFAGPVLGLTTVLYTVPSLAMFSLLLPLFGLSAA 92

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG  A P + +E A+       R    + LP   P  
Sbjct: 93  LVVTGLVLYSLTI----LVRNILAGLEAVPQEAREAATGMGYGPVRLLWEVELPLALPAL 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           + G   A       ++ +   +     +   GLG  I ++
Sbjct: 149 MAGLRIA-------TVSTVALTTVGSLVGKGGLGNLIEDA 181


>gi|213619362|ref|ZP_03373188.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 182

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L     R  + + ++M  +LL       L ++   +     ++ I ++  ++P L  L  
Sbjct: 39  LLYLGQRHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLAL 98

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V             +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ
Sbjct: 99  AMVIIGIG--------DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQ 150

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
           +   + +P + P ++  + ++
Sbjct: 151 RLRQVELPNAWPVMLSGIRIA 171



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 9/168 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                 + + +A    G  +     + V  +++LG   +  V   +  A ++ IP GI +
Sbjct: 10  LGFTIVILLLLALFIWGIGLETLKARQV-DLLYLGQRHLMLVFTSMFFALLVGIPSGILL 68

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP      +   Q+       P      L +  +            + +   +   I+
Sbjct: 69  -SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT----PAIVALFLASLLPIV 123

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            N  AG  + P    E A+   +T W+  R + LP  +P  ++G   A
Sbjct: 124 RNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIA 171


>gi|163741309|ref|ZP_02148701.1| ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10]
 gi|161385662|gb|EDQ10039.1| ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10]
          Length = 305

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +  V      +        SL  +   T    L   VI      + A     SR 
Sbjct: 76  LPAPHQVAVELWETTVEKKITSKRSLIYHGQVTLSATLLGFVIGTGLGILLAVGIVHSRV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P   + Q+IPI+      +V   ++    ++   + + +  F    + +   M 
Sbjct: 136 MDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGILPKAVISAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   ++ +++  S  Q FW L +P SMP L  ++ + ++      +  E+   
Sbjct: 192 KGLRSPDQMQLDLLKTYNASLGQGFWKLRLPASMPYLFASLKIGIAASLVGAIVGEL--- 248

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 249 --PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++  +I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGQVTLSATLLGFVIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVVLYSIGVQGILPKAVISAYLSFFPVVVGMVKGLRSPDQMQLDLLKTYNASLGQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPASMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|124268598|ref|YP_001022602.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum
           PM1]
 gi|124261373|gb|ABM96367.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum
           PM1]
          Length = 280

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +  A +  + + +       +   + P A +L           +   +  Y
Sbjct: 75  FTVKLTLLALGAAVLGGVLLAVAFALSRWVEVALFPIAVVLQ----VTPIIAIAPLILIY 130

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  L L L       + IL N   G  +     +++ + +  T W+  R++++P   P
Sbjct: 131 VESTTLALLLCAWIVAFFPILANTTIGLKSADARLRDLFTLYGATRWQRLRFLLVPSALP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y++ G   A G +   ++V+E  +      R TGL + I E++ +   P +   +L++  
Sbjct: 191 YFMAGLKVAGGLSLIGAVVAEFTAG--TAGRDTGLASRILEASFRTETPLMFAALLLVSL 248

Query: 565 FVLAL 569
             +A+
Sbjct: 249 LGVAI 253



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +LV   + + +  +    +P   +    +     +L      T    L A+  ++L
Sbjct: 30  LIVALLVTWELVVHIQKVPHYILPAPSLIFRTLIERWDTLGPSLWFTVKLTLLALGAAVL 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A   A SR + + L PI  ++Q           ++    L    V    LA +  
Sbjct: 90  GGVLLAVAFALSRWVEVALFPIAVVLQ--------VTPIIAIAPLILIYVESTTLALLLC 141

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +    + +  +    L +    L ++   +  + WQ+  +L VP ++P  +  + ++  
Sbjct: 142 AWIVAFFPILANTTIGLKSADARLRDLFTLYGATRWQRLRFLLVPSALPYFMAGLKVAGG 201

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                 V +E      T     G+ S I  A    +   +  A+L +  +      L+F 
Sbjct: 202 LSLIGAVVAEF--TAGTAGRDTGLASRILEASFRTETPLMFAALLLVSLLGVAI-FLVFS 258

Query: 262 PMIVW 266
            +  W
Sbjct: 259 GLSKW 263


>gi|296102549|ref|YP_003612695.1| putative ABC transporter, permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057008|gb|ADF61746.1| putative ABC transporter, permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 271

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++ R++  + IAS+I + +G+  G  P   + + P   +L+  P     P++      
Sbjct: 76  LVSLARLLAGLAIASLIGLCIGVTSGVFPLWRASLSPLMTVLSMIPPLAILPVLFIVFGL 135

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    +  ++   A   P +    A +   + W     ++LP + 
Sbjct: 136 DELSK----VMLIVIGITPMLARDLEHRACEIPPEILIKAQTLGASSWTLVLRVVLPQLL 191

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              +T      G AW   I +E  S       T GLG  I       +   ++  VL + 
Sbjct: 192 SRLLTSLRLLLGSAWLFLISAEAIS------STAGLGYRIFLVRRYMAMDVIIPYVLWIT 245

Query: 564 CFVLALNRFLWH 575
                ++  L  
Sbjct: 246 LLAWLMDLALRQ 257



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 15/226 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           LL G+Q+       + + P       L       +  R+L+ + I+ L        +   
Sbjct: 44  LLPGLQQMLDALSRMALTPDKRSGEYLFWVDTLVSLARLLAGLAIASLIGLCIGVTSGVF 103

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
                 L P++ ++  IP L  L    + F           EL+ +  I       +   
Sbjct: 104 PLWRASLSPLMTVLSMIPPLAILPVLFIVFGLD--------ELSKVMLIVIGITPMLARD 155

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +    C IP ++   +++   S W     + +P  +  L+ ++ + +   W F++++E I
Sbjct: 156 LEHRACEIPPEILIKAQTLGASSWTLVLRVVLPQLLSRLLTSLRLLLGSAWLFLISAEAI 215

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     G+G  I L  +   +  I+  +L +  + +L D  L
Sbjct: 216 S------STAGLGYRIFLVRRYMAMDVIIPYVLWITLLAWLMDLAL 255


>gi|182418918|ref|ZP_02950175.1| phosphate ABC transporter, permease protein PstC [Clostridium
           butyricum 5521]
 gi|237668742|ref|ZP_04528726.1| phosphate ABC transporter, permease protein PstC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377201|gb|EDT74769.1| phosphate ABC transporter, permease protein PstC [Clostridium
           butyricum 5521]
 gi|237657090|gb|EEP54646.1| phosphate ABC transporter, permease protein PstC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 296

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 13/214 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATL--AAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +TL  + A+V+S       A             V+ P L+I+  IP +  G++  +V+  
Sbjct: 80  STLVSVGAIVLSAPIAVSLAIFTNVISKGFGSKVIKPCLEILVGIPSVVYGWVGISVLVP 139

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+    G +  + L+ I  +    +  +      ++  IP+D  E S     + WQ  + 
Sbjct: 140 FIKNNFGGMGYSLLSGILVLSLMVLPTIATLCIDAIKTIPQDHIEASYGLGATRWQTIYK 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + VP +  G++  +++ ++  +   +A +M+ +G+TV    GI S ++       +    
Sbjct: 200 VIVPGAKSGILTGIVLGIARAFGEALAVQMV-IGNTVKIPDGILSSMSTLTSVITMDMAN 258

Query: 243 YAMLTM-------LGVIFLYDQLLFRPMIVWSNK 269
               TM       L +I L     F  ++ +  K
Sbjct: 259 TVGGTMWNNALWSLALILLIISFGFILLVRFIGK 292



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 69/177 (38%), Gaps = 10/177 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             ++  + ++     +++  +V+   IA  + I   +    +   S  I+P  ++L   P
Sbjct: 68  EPSFGALAFIAGSTLVSVGAIVLSAPIAVSLAIFTNVI--SKGFGSKVIKPCLEILVGIP 125

Query: 430 ANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEV 482
           + V+  + +S +       +  +  +L   +L++       +  + I      P D  E 
Sbjct: 126 SVVYGWVGISVLVPFIKNNFGGMGYSLLSGILVLSLMVLPTIATLCIDAIKTIPQDHIEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +     T W+    +I+PG     +TG +     A+  ++  ++   G+      G+
Sbjct: 186 SYGLGATRWQTIYKVIVPGAKSGILTGIVLGIARAFGEALAVQMV-IGNTVKIPDGI 241


>gi|86137286|ref|ZP_01055863.1| ABC transporter, permease protein [Roseobacter sp. MED193]
 gi|85825621|gb|EAQ45819.1| ABC transporter, permease protein [Roseobacter sp. MED193]
          Length = 281

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 89/263 (33%), Gaps = 10/263 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             + L  +      +      +     ++L         + + W  +V G+ + +     
Sbjct: 5   LLAALVWSFGWWLNSRLANGSNSDRGAVKLLVPVIFGITVLVVWELLVRGLQVSMVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       +  +      T  +  +   ++     + + + +     +   + P   
Sbjct: 65  PSLIVERFASSLPILWKDLSQTFLKGALSGYVMGCGAALLMAVAVDRSDFLRRGLLPVGN 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F     +L N +AG        +++ 
Sbjct: 125 FVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAGLRETSAMQRDLM 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I
Sbjct: 181 QTYAASYWQSFFKLRLPAALPFIFNGLKISTTLALVGAIVAEFFGS-----PTVGMGFRI 235

Query: 544 AESTEKGSFPEVVLGVLIMCCFV 566
           + S  + +   V   +++     
Sbjct: 236 STSVGQLALDMVWAEIVMAALAG 258



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 98/238 (41%), Gaps = 17/238 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   V+   ++  L   +     P  IV+    +L +  L +  S+T L+  L
Sbjct: 35  LVPVIFGITVLVVWELLVRGLQVSMVILPAPSLIVERFASSLPI--LWKDLSQTFLKGAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  V+      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 93  SGYVMGCGAALLMAVAVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         M  +    L        ++ +++  S WQ F+ L +P ++P + 
Sbjct: 153 VVVMVFF--------PMLVNTVAGLRETSAMQRDLMQTYAASYWQSFFKLRLPAALPFIF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + +S +      + +E         P  G+G  I+ ++ +  L  +++A + M  +
Sbjct: 205 NGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQLALD-MVWAEIVMAAL 256


>gi|186471061|ref|YP_001862379.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184197370|gb|ACC75333.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 272

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 15/241 (6%)

Query: 20  FDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           F ++A + +  +         +    P  I       L+  +L      T    +  +V+
Sbjct: 32  FIVVALIALWQVAVSAGWINGKLLGSPAGIWLAAQQGLNGGTLISDTLVTLYETVLGLVV 91

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                     L     R+  V   +  I+ SIP +      V++F +    KV  A ++ 
Sbjct: 92  GSGLGIALGLLLWFVPRVSGVAEGLSVILNSIPKIALGPLIVIWFGSDMTSKVWLAGIST 151

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
                 S           +   + +DL  + RSF       F  L +P +MP +   + +
Sbjct: 152 FAVAMISSC--------AAAREVDKDLLNLFRSFNAKPSMIFTKLILPGAMPWVFSTLRV 203

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++       V  E I          G+G  + +A    DL  +   ++ +  +  L   +
Sbjct: 204 NIGFALIGAVVGEYIA------SQAGLGHEVFVAGSLFDLNTVWLGIIVLTLMATLLSWI 257

Query: 259 L 259
           +
Sbjct: 258 V 258



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 17/237 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVVV 392
            +    +     +  VA+   W +   + +             G        +T++  V+
Sbjct: 28  GAVAFIVVALIALWQVAVSAGWINGKLLGSPAGIWLAAQQGLNGGTLISDTLVTLYETVL 87

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +++ S + I +G+ + F P +S   +  + +L + P     PL+V        +     
Sbjct: 88  GLVVGSGLGIALGLLLWFVPRVSGVAEGLSVILNSIPKIALGPLIVIWFGSDMTSKVWLA 147

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +          + +  A A     D   +  SF+      +  +ILPG  P+  +    
Sbjct: 148 GISTFAVA----MISSCAAAREVDKDLLNLFRSFNAKPSMIFTKLILPGAMPWVFSTLRV 203

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             G A   ++V E  +         GLG  +  +        V LG++++      L
Sbjct: 204 NIGFALIGAVVGEYIA------SQAGLGHEVFVAGSLFDLNTVWLGIIVLTLMATLL 254


>gi|294787286|ref|ZP_06752539.1| putative ABC transporter permease protein [Parascardovia
           denticolens F0305]
 gi|294484642|gb|EFG32277.1| putative ABC transporter permease protein [Parascardovia
           denticolens F0305]
          Length = 252

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 17/245 (6%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
            P    +L  ++V  I  +     +   + P  I D +       SL  Y   T    +S
Sbjct: 7   LPCAITVLGLLMVWQIGVMASKASERIISSPSQIWDALVYNWPQLSLSAYV--TAFEAIS 64

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I+++   +       S+ L   L P+L   Q++PI+      V++F     GK    
Sbjct: 65  GFLIAIVVGILLGVGLFLSKILYSSLYPLLAGAQTLPIITIAPLFVIWFGYDSLGK---- 120

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               I  +    ++ +     + L  +PR   +V+ +   +     W++ +  +   +  
Sbjct: 121 ----IVLVTVFSLFPIAVQTCRGLEAVPRYFRDVALTCGATPAWSLWHVQLRVAGRQIFS 176

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +S +  +     +E I          GIG ++  A        +  A + M+ +  L
Sbjct: 177 GIRISATYIFATAATAEYIGAKA------GIGVWMQAAYNSFQTPMVFAATVVMVVLTGL 230

Query: 255 YDQLL 259
              L+
Sbjct: 231 VMALV 235



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 10/199 (5%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   +     +T F  +   +IA ++ I +G+ +     + S + P        P     
Sbjct: 47  NWPQLSLSAYVTAFEAISGFLIAIVVGILLGVGLFLSKILYSSLYPLLAGAQTLPIITIA 106

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL V    Y     +L   +L+   + + I      G  A P  F++VA +   T     
Sbjct: 107 PLFVIWFGY----DSLGKIVLVTVFSLFPIAVQTCRGLEAVPRYFRDVALTCGATPAWSL 162

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ L        +G   +    +  +  +E            G+G ++  +      P 
Sbjct: 163 WHVQLRVAGRQIFSGIRISATYIFATAATAEYIG------AKAGIGVWMQAAYNSFQTPM 216

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V    ++M      +   +
Sbjct: 217 VFAATVVMVVLTGLVMALV 235


>gi|225626753|ref|ZP_03784792.1| ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|256158920|ref|ZP_05456767.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|256254291|ref|ZP_05459827.1| binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
 gi|260169789|ref|ZP_05756600.1| ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261221446|ref|ZP_05935727.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261759334|ref|ZP_06003043.1| ABC transporter [Brucella sp. F5/99]
 gi|265997408|ref|ZP_06109965.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|225618410|gb|EEH15453.1| ABC transporter, permease protein [Brucella ceti str. Cudo]
 gi|260920030|gb|EEX86683.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261739318|gb|EEY27314.1| ABC transporter [Brucella sp. F5/99]
 gi|262551876|gb|EEZ07866.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
          Length = 248

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQS 109
            P+  D  +L     +    +  A   S L     A    + +      +   +++I Q+
Sbjct: 39  TPVIYDRANLMTLTLQHLGLVALATFCSTLTAVTMAIFVTRRQGAEFLPLSRSLVNIGQT 98

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P +  L   V  F           +   + A+F   +  +  +    L ++P  + E +
Sbjct: 99  FPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAA 150

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++G Q+ + + +P +MP ++  + +S   G         +           +G  I
Sbjct: 151 RGMGMTGMQRLFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVI 203

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
              +   +L  +L   L +  +  L 
Sbjct: 204 IAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++  + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLTAVTMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RLFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|22536425|ref|NP_687276.1| amino acid ABC transporter permease [Streptococcus agalactiae
           2603V/R]
 gi|22533253|gb|AAM99148.1|AE014202_16 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
          Length = 213

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 72/186 (38%), Gaps = 15/186 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +         A+  ++   ++ I +++Q+IP L  ++  ++             
Sbjct: 32  GVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLGI------- 84

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +  +F   +  +  + Y  + N+  DL + ++   ++  Q+ + + +P S+  ++ 
Sbjct: 85  -KTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVIMA 143

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          +V +  I      +   G+G  I       +  AI+ A      ++ +
Sbjct: 144 GLR-------NALVVAIGITAIGAFVGGGGLGDIIIRGTNATNGGAIILAGSLPTALMAI 196

Query: 255 YDQLLF 260
           +  L+ 
Sbjct: 197 FSDLIL 202



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 4/141 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               V  +I+A+I+ IP+GI+I  R  I + +   A ++   P+     +++  +     
Sbjct: 26  FLISVYGVILAAIVGIPLGIFIARRGKIKTFVMGIANVIQTIPSLAMISIIMLGLGLG-- 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   I+ N   G     +D  + A    +T  +    + LP      
Sbjct: 84  --IKTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVI 141

Query: 507 VTGAITACGGAWNASIVSEVA 527
           + G   A   A   + +    
Sbjct: 142 MAGLRNALVVAIGITAIGAFV 162


>gi|168491302|ref|ZP_02715445.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC0288-04]
 gi|183574337|gb|EDT94865.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pneumoniae CDC0288-04]
          Length = 305

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 17/217 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-------TLDVHSLPQYASRTTLRMLS 74
                L++ ++ ++L  + +  +    V+ V I       T +  S    A    L    
Sbjct: 28  FACLSLIVILVAMILVFVAQKGLSTFFVNGVNIFDFLLGGTWNPSSKEFGALPMILGSFI 87

Query: 75  AMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
             ++S L    +A  AA      S +   +L P ++++  IP + +    L   V +  +
Sbjct: 88  VTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRS 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++ G   G  L+ I  +F   +  +TF    SL  +PR   E S +   + WQ  W + +
Sbjct: 148 VFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREASFAMGSTRWQTIWRVIL 206

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 207 KAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P V S            +S+L +      + F       A P  ++E + +  
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGISVLFVMI-LPTVTFMTTDSLRAVPRYYREASFAMG 194

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            T W+    +IL        T  +     A+  ++  ++       + T+
Sbjct: 195 STRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|229141521|ref|ZP_04270055.1| ABC transporter permease protein [Bacillus cereus BDRD-ST26]
 gi|228641921|gb|EEK98218.1| ABC transporter permease protein [Bacillus cereus BDRD-ST26]
          Length = 203

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 73/177 (41%), Gaps = 12/177 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+
Sbjct: 3   GSLLVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPI 62

Query: 437 VVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++         PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++
Sbjct: 63  IIVIFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYK 117

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            ++LP  FP  ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 118 QVVLPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 168



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T L      ++  +   + AT       L  VL P L ++ ++P +     
Sbjct: 3   GSLLVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPI 62

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F       +    + +I              +Y +   +  +  +V  +F  + WQ
Sbjct: 63  IIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQ 114

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P S P ++  + +++   W  V+  E++V         G+G  I+   +  + 
Sbjct: 115 CYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNF 168

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L    +  L    +
Sbjct: 169 TLVLLSVLLTCVLATLMYVFV 189


>gi|293402496|ref|ZP_06646631.1| ABC transporter, permease protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304010|gb|EFE45264.1| ABC transporter, permease protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 248

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   V  ++IA++  I + I +    +    I P   +    P  V  PL    + 
Sbjct: 56  SMVTLQEAVTGLMIATVAAILIAIGMDLSKNFKHSIFPHLVVTQTVPVMVLGPLFTIWLG 115

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +          L+++F   + I+       +    +   +  SF    W+ + Y+ +P  
Sbjct: 116 FG----MAPKVLMVVFMCFFPIVIAFCDALAQVDVNQINLLKSFGAKKWQVYAYVKIPAA 171

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                +G   +       +IV E  S       + GLG Y+          +V   V+++
Sbjct: 172 ATALFSGLKVSATYCIGGAIVGEWLS------ASAGLGYYMIRVKNGYMLDKVFACVIVI 225



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 24/212 (11%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  IV+ +    DV  L  ++  T    ++ ++I+ +   + A     S+     + 
Sbjct: 35  LPAPSKIVEAMLANADV--LWMHSMVTLQEAVTGLMIATVAAILIAIGMDLSKNFKHSIF 92

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L + Q++P++       ++       KV+         +     + +  +   +L  +
Sbjct: 93  PHLVVTQTVPVMVLGPLFTIWLGFGMAPKVL--------MVVFMCFFPIVIAFCDALAQV 144

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS----MSGGWFFVVASEMIVVGD 217
             +   + +SF    WQ + Y+ +P +   L   + +S    + G           +VG+
Sbjct: 145 DVNQINLLKSFGAKKWQVYAYVKIPAAATALFSGLKVSATYCIGGA----------IVGE 194

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            +    G+G Y+        L  +   ++ ++
Sbjct: 195 WLSASAGLGYYMIRVKNGYMLDKVFACVIVII 226


>gi|284044717|ref|YP_003395057.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948938|gb|ADB51682.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 243

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L     +     L A+ I  +  FV A  A +   L   +V +  ++ +IP L      
Sbjct: 43  TLQPALLQHIALTLIAVGIGSVIAFVLALAAHRRGWLATPIVIVTGLLFTIPSLALFQLL 102

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V +           +   A  A+ +  +  +  +M   L  +P ++ + +R   ++  Q 
Sbjct: 103 VPFTGL--------SRTTAEIALVSYTLLILFRNMLAGLSGVPAEVRDAARGMGMTERQL 154

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            W + +P ++P +V  + ++       V    +  V   V+   G+G+ I  A+++    
Sbjct: 155 LWKVELPLALPAIVAGLRIA------TVTVISLATVAVFVVN-EGLGAPIYSALQQTFKT 207

Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWS 267
            ++ A    + +    D LL    R +  W+
Sbjct: 208 ELIAAGAMCVLLGLFADALLVLAQRALSPWT 238



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 13/201 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D L    L  I +  + V   I S+I   + +    R  +++ I     LL   P+  
Sbjct: 40  WSDTLQPALLQHIALTLIAVG--IGSVIAFVLALAAHRRGWLATPIVIVTGLLFTIPSLA 97

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F L+V           + L    +      +  N++AG S  P + ++ A    +T  +
Sbjct: 98  LFQLLVPFTGLSRTTAEIALVSYTLLI----LFRNMLAGLSGVPAEVRDAARGMGMTERQ 153

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P  V G   A     + + V+       + +   GLGA I  + ++   
Sbjct: 154 LLWKVELPLALPAIVAGLRIATVTVISLATVA-------VFVVNEGLGAPIYSALQQTFK 206

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            E++    +     L  +  L
Sbjct: 207 TELIAAGAMCVLLGLFADALL 227


>gi|107025580|ref|YP_623091.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116693237|ref|YP_838770.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105894954|gb|ABF78118.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116651237|gb|ABK11877.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 255

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I  +          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLV 239



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +I+ +  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAV-TRPFGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|307705872|ref|ZP_07642710.1| ABC transporter, permease protein [Streptococcus mitis SK597]
 gi|307710328|ref|ZP_07646769.1| ABC transporter, permease protein [Streptococcus mitis SK564]
 gi|307618920|gb|EFN98055.1| ABC transporter, permease protein [Streptococcus mitis SK564]
 gi|307620533|gb|EFN99631.1| ABC transporter, permease protein [Streptococcus mitis SK597]
          Length = 238

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  +     D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQAFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++Q+IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVVQTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|300716566|ref|YP_003741369.1| Binding-protein-dependent transport systems inner membrane
           component [Erwinia billingiae Eb661]
 gi|299062402|emb|CAX59519.1| Binding-protein-dependent transport systems inner membrane
           component [Erwinia billingiae Eb661]
          Length = 215

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 84/213 (39%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       +  + + L   ++ +  I+ +IP +   
Sbjct: 10  NWSYLASLTFQHLWLVGLAVGMAIVIGVPLGIVIVRYKWLATPVLGLATIVLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L NIP  L E  R   ++ 
Sbjct: 70  GLMIPLFSMIGQGIGV---LPAVTAVFLYSLLPIVRNTHTALENIPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 SQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGLLL-------LDGISGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +  + K
Sbjct: 180 DVRMLIAGALMICLLAIILDWLLHRLQLALTPK 212



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A +I +P+GI I     +++ +   A ++   P
Sbjct: 5   HYIIDNWSYLASLTFQHLWLVGLAVGMAIVIGVPLGIVIVRYKWLATPVLGLATIVLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N        P   +E      +
Sbjct: 65  SIALFGLMIPLFSMIGQGIGVLPAVTAVFLYSLLPIVRNTHTALENIPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T  +  R++ +P   P    G  TA         ++ V   G + L          +   
Sbjct: 125 TFSQRLRWVEIPMALPVIFGGIRTAVVMNVGVMAIAAVIGAGGLGLLLL-------DGIS 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDVRMLIAGALMICLLAIILDWLLHR 204


>gi|229032443|ref|ZP_04188412.1| ABC transporter permease protein [Bacillus cereus AH1271]
 gi|229175504|ref|ZP_04303014.1| ABC transporter permease protein [Bacillus cereus MM3]
 gi|228607900|gb|EEK65212.1| ABC transporter permease protein [Bacillus cereus MM3]
 gi|228728890|gb|EEL79897.1| ABC transporter permease protein [Bacillus cereus AH1271]
          Length = 198

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 7   TLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 63

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 64  --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 121

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 122 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 163



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T L      ++  +   + AT       L  VL P L ++ ++P +      +V F
Sbjct: 3   HIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIF 62

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  +    + +I              +Y +   +  +  +V  +F  + WQ +  +
Sbjct: 63  GPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQCYKQV 114

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S P ++  + +++   W  V+  E++V         G+G  I+   +  +   +L 
Sbjct: 115 VLPASFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLVLL 168

Query: 244 AMLTMLGVIFLYDQLL 259
           ++L    +  L    +
Sbjct: 169 SVLLTCVLATLMYVFV 184


>gi|170731406|ref|YP_001763353.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169814648|gb|ACA89231.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 282

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADYLLTR 269



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADYLLTRIEKRLLKW 277


>gi|126734191|ref|ZP_01749938.1| ABC transporter, permease protein, putative [Roseobacter sp. CCS2]
 gi|126717057|gb|EBA13921.1| ABC transporter, permease protein, putative [Roseobacter sp. CCS2]
          Length = 283

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 9/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   II  I    V I       ++  I P    +AA P     P+ V  +     +   
Sbjct: 94  MTGYIIGMIAAFAVAILADRSEFLTRGIMPVGGFMAALPIVGTAPIFVRWLGSDWQSKAA 153

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++++ F     IL N +AG        +++  ++    W     + LP   P+   G 
Sbjct: 154 VVAVMVFF----PILVNTVAGLRDTTAMQRDLMRTYGAGYWATLFKLRLPAAMPFIFNGL 209

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   A   +IV+E          T G+G  I+ S  + +   V   +++      AL 
Sbjct: 210 KIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALAGSALY 264

Query: 571 RFL 573
             +
Sbjct: 265 GLM 267



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 71/187 (37%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++  +I ++  F  A LA +S  L   ++P+   M ++PI+G     V +  + +  K  
Sbjct: 94  MTGYIIGMIAAFAVAILADRSEFLTRGIMPVGGFMAALPIVGTAPIFVRWLGSDWQSKAA 153

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                    +     + +  +    L +      ++ R++    W   + L +P +MP +
Sbjct: 154 --------VVAVMVFFPILVNTVAGLRDTTAMQRDLMRTYGAGYWATLFKLRLPAAMPFI 205

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      + +E         P  G+G  I+ ++ +  L  +   ++      
Sbjct: 206 FNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALAG 260

Query: 253 FLYDQLL 259
                L+
Sbjct: 261 SALYGLM 267


>gi|254725157|ref|ZP_05186940.1| ABC transporter, permease protein [Bacillus anthracis str. A1055]
          Length = 203

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 12  TLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 68

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 69  --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 126

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 127 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 168



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T L      ++  +   + AT       L  VL P L ++ ++P +     
Sbjct: 3   GSLWIHIWTTLLETGVGFILGTVLGAIIATFLWWIPLLARVLDPYLVVLNAMPKVALGPI 62

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F       +    + +I              +Y +   +  +  +V  +F  + WQ
Sbjct: 63  IIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQ 114

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P S P ++  + +++   W  V+  E++V         G+G  I+   +  + 
Sbjct: 115 CYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNF 168

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L    +  L    +
Sbjct: 169 TLVLLSVLLTCVLATLMYVFV 189


>gi|284045545|ref|YP_003395885.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949766|gb|ADB52510.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 258

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 61/157 (38%), Gaps = 4/157 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++  +++  ++A+ + IP+G+ +G    +   +  + + L           ++  +  
Sbjct: 62  LASLEHLLIGFLLAAAVGIPIGLAMGRSIVVDHVVGMYVRGLFVTSLAA----ILPLLII 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                  +   ++   + ++I+ N  AGA A        A +F +   R +  ++LP   
Sbjct: 118 ILDVGFRFRIAVVFLFSVFFIIVNTAAGARAVSEQLLITARAFAVKPLRRFVTVVLPASL 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           PY   G       A+   +++E+           GLG
Sbjct: 178 PYVFLGLRLGIANAFTGMVLAELWVSRGTGAVLEGLG 214



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 77/210 (36%), Gaps = 18/210 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +   +L   +++            +S  +  V+         + + G    ++   +
Sbjct: 61  LLASLEHLLIGFLLAAAVGIPIGLAMGRSIVVDHVVG--------MYVRGLFVTSLAAIL 112

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    +       I  +F   V+ +  +       +   L   +R+F +   ++F  + 
Sbjct: 113 PLLIIILDVGFRFRIAVVFLFSVFFIIVNTAAGARAVSEQLLITARAFAVKPLRRFVTVV 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P +   + + ++  +  +V +E+ V   T   L G+G       + +DL      
Sbjct: 173 LPASLPYVFLGLRLGIANAFTGMVLAELWVSRGTGAVLEGLG-------QNRDLPPFFAL 225

Query: 245 MLTMLGVIFLYDQLL---FRPMIVWSNKFR 271
           ++ +  +  L  Q +    + ++ W+ + R
Sbjct: 226 VILVTLLAALSAQSIRWTEQRLMPWAKEVR 255


>gi|170017609|ref|YP_001728528.1| ABC-type phosphate transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169804466|gb|ACA83084.1| ABC-type phosphate transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 307

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 92/246 (37%), Gaps = 21/246 (8%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
            L G        D     P    +  +      T L  + A   ++  +     +A   +
Sbjct: 61  FLFGTNWNPSVIDPHTKQPYIGALPMILGSFLVTLLAAIVATPFAIGTSLFMTEIA--QK 118

Query: 95  RLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           R   ++ PI++++  IP + +    LT  V +    + G   G     I   F   +  +
Sbjct: 119 RGAKIMQPIIELLVGIPSVVYGFIGLTVVVPFIRATFGGSGFGILSGTIVL-FVMILPTI 177

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     +L ++PR   E + +   + WQ  + + +  + PG++  ++  M+  +   +A 
Sbjct: 178 TSMTVDTLKSVPRHYRESALAIGATRWQMIYKVVLRAATPGILTAIVFGMARAFGEALAV 237

Query: 211 EMIVVGD--------------TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           +M++                 T +   GIG+ +  +++   L  +   +L M  V  L  
Sbjct: 238 QMVIGNAALMPHNLISPASTLTSVLTMGIGNTVMGSLQNNVLWTLAMILLLMSLVFNLIV 297

Query: 257 QLLFRP 262
           + + R 
Sbjct: 298 RAIGRR 303



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 79/234 (33%), Gaps = 25/234 (10%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQL 424
           +++  T Q  +  + +   +    ++  I+A+   I   +++    +   +  +QP  +L
Sbjct: 71  VIDPHTKQPYIGALPMILGSFLVTLLAAIVATPFAIGTSLFMTEIAQKRGAKIMQPIIEL 130

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
           L   P+ V+         P + +              +L +      I    +    + P
Sbjct: 131 LVGIPSVVYGFIGLTVVVPFIRATFGGSGFGILSGTIVLFVMI-LPTITSMTVDTLKSVP 189

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH----- 531
             ++E A +   T W+    ++L    P  +T  +     A+  ++  ++          
Sbjct: 190 RHYRESALAIGATRWQMIYKVVLRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPH 249

Query: 532 ---------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                      + T G+G  +  S +      + + +L+M      + R +   
Sbjct: 250 NLISPASTLTSVLTMGIGNTVMGSLQNNVLWTLAMILLLMSLVFNLIVRAIGRR 303


>gi|148560711|ref|YP_001258250.1| ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148371968|gb|ABQ61947.1| ABC transporter, permease protein [Brucella ovis ATCC 25840]
          Length = 386

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 75/203 (36%), Gaps = 9/203 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LG 114
             S    A R    +L +++ + +       +  +  RL   ++  L+I+Q+IP     G
Sbjct: 171 AASFWIEARRHIALVLGSLLAAAIAGIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFG 230

Query: 115 FLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            L   + +F   +P     G        A  A+F   +  +  +    L  +P  + + +
Sbjct: 231 ILIAPLSWFAAQFPWAASLGIRGIGAAPAFVALFLYSLLPIVTNTVAGLAQVPEPVTDAA 290

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSY 228
           R   ++  Q+ +    P + P ++  + + M        +A+ +   G  +    GIG  
Sbjct: 291 RGMGMTRLQRLFRTEFPLAFPVILTGIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQT 350

Query: 229 IALAIKEQDLLAILYAMLTMLGV 251
               +    L  +L A    + +
Sbjct: 351 AMDLVLLGALPTVLLAFAAAVIL 373



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 13/189 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++ A+I  IP+G+     P + + +     ++   P+   F ++++ +S++     
Sbjct: 185 VLGSLLAAAIAGIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFP 244

Query: 450 LWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              SL             +   +   I+ N +AG +  P    + A    +T  +     
Sbjct: 245 WAASLGIRGIGAAPAFVALFLYSLLPIVTNTVAGLAQVPEPVTDAARGMGMTRLQRLFRT 304

Query: 498 ILPGIFPYYVTGAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             P  FP  +TG            +I + +   G       G+G    +    G+ P V+
Sbjct: 305 EFPLAFPVILTGIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVL 364

Query: 557 LGVLIMCCF 565
           L        
Sbjct: 365 LAFAAAVIL 373


>gi|167758988|ref|ZP_02431115.1| hypothetical protein CLOSCI_01335 [Clostridium scindens ATCC 35704]
 gi|167663395|gb|EDS07525.1| hypothetical protein CLOSCI_01335 [Clostridium scindens ATCC 35704]
          Length = 265

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 75/196 (38%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  +V  ++   I I V + + F   +S  + P+  +L + P +   PL+
Sbjct: 69  SIFLHIGVTLYETIVSFLLVIAISILVAVTLWFSSKLSEILDPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + ++    +       ++  +   + +     +
Sbjct: 129 IVWLGATKTTIIVAGMSVAIFGS----ILSLYTSFTIVDPGKIKLIYTLGGSRFHALTKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  ++      G      I+ E  +         GLG  I  S++      +++
Sbjct: 185 VLPSTIPTIISNMKVNIGLCLVGVIIGEFLAARD------GLGYLIIYSSQVFKMDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L   +
Sbjct: 239 SIVLLCIMAMGLYSLI 254



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + ++ +  + + A     S +L  +L P L ++ S+P        +V+ 
Sbjct: 73  HIGVTLYETIVSFLLVIAISILVAVTLWFSSKLSEILDPYLVVLNSLPKSALAPLLIVWL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            S+Y S   +     ++  +   S +     +
Sbjct: 133 GATKTTIIVAGMSVAIFGSI--------LSLYTSFTIVDPGKIKLIYTLGGSRFHALTKV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++ NM +++      V+  E +   D      G+G  I  + +   +  +L 
Sbjct: 185 VLPSTIPTIISNMKVNIGLCLVGVIIGEFLAARD------GLGYLIIYSSQVFKMDWLLM 238

Query: 244 AMLTMLGVIFLYDQLL 259
           +++ +  +      L+
Sbjct: 239 SIVLLCIMAMGLYSLI 254


>gi|126731585|ref|ZP_01747391.1| ABC transporter, permease protein [Sagittula stellata E-37]
 gi|126708121|gb|EBA07181.1| ABC transporter, permease protein [Sagittula stellata E-37]
          Length = 316

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L    L  +A  T        +I      V A     SR + M ++P   + Q+IPI+ 
Sbjct: 107 SLSNRGLLYHAIVTLNATFVGFLIGTGLGIVLAIGIVHSRVMDMSVMPWAIVSQTIPIVA 166

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +V   ++    ++   + + +  F    + +   M + L +      ++ R++  
Sbjct: 167 LAPMIIVVLYSIGIQGLLPKAVISAYLSF----FPVVVGMVKGLRSPDGMQMDLMRTYNA 222

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
                   L +P S+P L  ++ ++++      +      VG+  +   G+G+ +     
Sbjct: 223 PTRDVLTKLRLPASVPYLFASLKIAIAASLVGAI------VGELPVQKGGLGARMLAGSY 276

Query: 235 EQDLLAIL 242
                 I 
Sbjct: 277 YGQTAQIW 284



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 69/178 (38%), Gaps = 6/178 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +T+    V  +I + + I + I I     +   + P+A +    P     P+++
Sbjct: 113 LLYHAIVTLNATFVGFLIGTGLGIVLAIGIVHSRVMDMSVMPWAIVSQTIPIVALAPMII 172

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    +   L  +++  + + + ++  ++ G  +      ++  +++         + 
Sbjct: 173 VVLYSIGIQGLLPKAVISAYLSFFPVVVGMVKGLRSPDGMQMDLMRTYNAPTRDVLTKLR 232

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           LP   PY       A   +   +IV E+       ++  GLGA +   +  G   ++ 
Sbjct: 233 LPASVPYLFASLKIAIAASLVGAIVGEL------PVQKGGLGARMLAGSYYGQTAQIW 284


>gi|150016012|ref|YP_001308266.1| phosphate ABC transporter inner membrane subunit PstC [Clostridium
           beijerinckii NCIMB 8052]
 gi|149902477|gb|ABR33310.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           beijerinckii NCIMB 8052]
          Length = 297

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFT 119
           +   +TL  + A+VIS       A       S+    ++ P L+++  IP +  G++  +
Sbjct: 77  FILGSTLVSVGAVVISAPIAIALAIFVNVISSKFGKKIIKPSLEVLVGIPSVVYGWVGIS 136

Query: 120 VVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           V+  F+    G +  + +A I  +    +  +      ++  IP+D  E S     + WQ
Sbjct: 137 VLVPFIKGSFGGMGFSLIAGILVLSLMILPTIATLSIDAIKTIPQDHIEASYGLGATRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             + + VP +  G++  +++ ++  +   +A +M++     IP
Sbjct: 197 TIYRIIVPGAKSGILTGVVLGIARAFGEALAVQMVIGNTVKIP 239



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 69/175 (39%), Gaps = 9/175 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             ++  + +++    +++  VV+   IA  + I V +           I+P  ++L   P
Sbjct: 69  EPSFGALAFILGSTLVSVGAVVISAPIAIALAIFVNVI--SSKFGKKIIKPSLEVLVGIP 126

Query: 430 ANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEV 482
           + V+  + +S +      S+  +  +L   +L++       +  + I      P D  E 
Sbjct: 127 SVVYGWVGISVLVPFIKGSFGGMGFSLIAGILVLSLMILPTIATLSIDAIKTIPQDHIEA 186

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +     T W+    II+PG     +TG +     A+  ++  ++     + +  +
Sbjct: 187 SYGLGATRWQTIYRIIVPGAKSGILTGVVLGIARAFGEALAVQMVIGNTVKIPDS 241


>gi|126641332|ref|YP_001084316.1| binding-protein dependent transport system inner membrane protein
           [Acinetobacter baumannii ATCC 17978]
 gi|126387216|gb|ABO11714.1| Binding-protein-dependent transport systems inner membrane
           component [Acinetobacter baumannii ATCC 17978]
          Length = 141

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 10/138 (7%)

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            +     +++ GT +  +  +            E   +      +   ++++P   P   
Sbjct: 7   NDAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIY 66

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
                  G AW   IVSE+         T+G+  +I +     +F  V   +LI+    L
Sbjct: 67  RDLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVIGL 120

Query: 568 ALNRFLWHPLYLYGTRCL 585
             +      L   G R  
Sbjct: 121 VCDWL----LMKLGERVF 134



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 53/127 (41%), Gaps = 6/127 (4%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           +   I  I    ++     +  +   + R L E   +   +  +  +++ +P ++P +  
Sbjct: 8   DAPKIAIIVIGTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYR 67

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           ++ + +   W +++ SE+I          GI  +I    + Q+   +  A+L +  +  +
Sbjct: 68  DLRVLLGWAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILIIGVIGLV 121

Query: 255 YDQLLFR 261
            D LL +
Sbjct: 122 CDWLLMK 128


>gi|254419569|ref|ZP_05033293.1| ABC transporter, permease protein, putative [Brevundimonas sp.
           BAL3]
 gi|196185746|gb|EDX80722.1| ABC transporter, permease protein, putative [Brevundimonas sp.
           BAL3]
          Length = 251

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 66/173 (38%), Gaps = 5/173 (2%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT    V  +++A ++   + + +   P     ++P A  L   P     PLV+      
Sbjct: 58  ITFGMAVQALVLAGLVGGGLALAVSLHPAAERAVRPLAVALQVTPVVAVAPLVLIWAGLD 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           H +  +     ++    + +   ++ G  +   D + +   +  T  +    + LP   P
Sbjct: 118 HADRAVVALAAVVA--FFPLFSGILTGMKSADPDLERLFDLYGATPLQRLWRLRLPSALP 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           + + G   A G A   ++V+E  S       T GL   + E+  +    E++ 
Sbjct: 176 FALEGLRVAAGLAVIGAVVAEFVSGSG---ATQGLAWRLLEAGNRLRTAEMLA 225



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 57/162 (35%), Gaps = 6/162 (3%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L   A  T    + A+V++ L     A   +        + P+   +Q  P++      +
Sbjct: 52  LAASAWITFGMAVQALVLAGLVGGGLALAVSLHPAAERAVRPLAVALQVTPVVAVAPLVL 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++    +  + + A  A          + +   +   + +   DLE +   +  +  Q+ 
Sbjct: 112 IWAGLDHADRAVVALAAV------VAFFPLFSGILTGMKSADPDLERLFDLYGATPLQRL 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           W L +P ++P  +  + ++        V +E +        L
Sbjct: 166 WRLRLPSALPFALEGLRVAAGLAVIGAVVAEFVSGSGATQGL 207


>gi|53714048|ref|YP_100040.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
 gi|60682243|ref|YP_212387.1| putative phosphate-related ABC transporter membrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|253564690|ref|ZP_04842146.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52216913|dbj|BAD49506.1| putative ABC transporter permease protein [Bacteroides fragilis
           YCH46]
 gi|60493677|emb|CAH08466.1| putative phosphate-related ABC transport system, membrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|251946155|gb|EES86532.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301163721|emb|CBW23275.1| putative phosphate-related ABC transport system, membrane protein
           [Bacteroides fragilis 638R]
          Length = 398

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 90/228 (39%), Gaps = 20/228 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    +   ++    ++   L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLSVSIYMSEVADSKVRSWLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
                  Y  L +LGV+  +  L+          F +E  +      S
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLIIN--------FSVEYISSKGVKRS 397



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+IA    + V I++       + S ++P  +LL
Sbjct: 160 FPTATPAPLFGFLPLITGTLWVSLFAILIALPFGLSVSIYMSEVADSKVRSWLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|206901048|ref|YP_002250297.1| abcb protein, putative [Dictyoglomus thermophilum H-6-12]
 gi|206740151|gb|ACI19209.1| abcb protein, putative [Dictyoglomus thermophilum H-6-12]
          Length = 250

 Score = 69.6 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 16/220 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
             +P  ++  V       +   +   T LR +     +L     +     K++ L   + 
Sbjct: 32  LPLPHKVLYKVLELFSERNFYHHLFITLLRSVGGF--TLALFLGFLLGCIKNKFLYSAIR 89

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I+DI QS P++ ++T  + +F               +F +F     N     Y ++ NI
Sbjct: 90  NIIDIFQSNPLIVWITIALFWFG--------FGNKTIVFTVFIVLFPNFYLITYNAINNI 141

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           P++  E+ + + +S  +      +P+  P L+  +  S+         +E +        
Sbjct: 142 PKEYIELFKIYPISRKKYLTKFLIPYLKPFLLPTLANSIISSLKITAMAEFLSGES---- 197

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             GIG  ++ A    +   +    + +     + + +  R
Sbjct: 198 --GIGFLLSYAKTFLNTEEVYAYAVILFVFSKILEFIFIR 235



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 68/167 (40%), Gaps = 11/167 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              + S I+    +  + P  V+  + +    + +    ++   +++F   + I +N I 
Sbjct: 81  NKFLYSAIRNIIDIFQSNPLIVWITIALFWFGFGNKT-IVFTVFIVLFPNFYLITYNAI- 138

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
             +  P ++ E+   + I+  ++    ++P + P+ +     +   +   + ++E  S  
Sbjct: 139 --NNIPKEYIELFKIYPISRKKYLTKFLIPYLKPFLLPTLANSIISSLKITAMAEFLSGE 196

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                 +G+G  ++ +    +  EV    +I+  F   L  F++  L
Sbjct: 197 ------SGIGFLLSYAKTFLNTEEVYAYAVILFVFSKILE-FIFIRL 236


>gi|228988045|ref|ZP_04148146.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771679|gb|EEM20144.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 244

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 53  TLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 109

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 110 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 167

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 168 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 209



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I ++        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 28  SSPSSIWELFLSKWMDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDP 87

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F       +    + +I              +Y +   + 
Sbjct: 88  YLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVD 139

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V        
Sbjct: 140 SNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SK 193

Query: 223 PGIGSYIALAIKEQDL 238
            G+G  I+   +  + 
Sbjct: 194 QGLGYLISYGFQVFNF 209


>gi|167645225|ref|YP_001682888.1| binding-protein-dependent transporte inner membrane component
           [Caulobacter sp. K31]
 gi|167347655|gb|ABZ70390.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter sp. K31]
          Length = 252

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 5/182 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               ++     T+   +V + +AS +   + + +   P I   ++P A  L   P     
Sbjct: 45  GWPLLLASAWNTLSTALVGLALASALACGLALLVSLNPVIEDAVRPVAVTLQVTPLVAIG 104

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+       H  P   +  L      + I    + G  A   D   +   +     +  
Sbjct: 105 PLMTIWAGIEH--PQRAVVALAAVAAFFPIFSGALTGLKAVDPDLGRLFDLYGARRVQRL 162

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   P  + G   A G A   ++V+E  +         GL   I E++ +     
Sbjct: 163 WRLRLPSAVPALLEGHKVAAGLAVVGAVVAEFVAGSG---GNQGLAWRILEASNRLQTAR 219

Query: 555 VV 556
           V 
Sbjct: 220 VF 221



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 12/227 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
            +P        +      L   A  T    L  + ++       A L + +  +   + P
Sbjct: 31  LLPAPSAIGAALADGWPLLLASAWNTLSTALVGLALASALACGLALLVSLNPVIEDAVRP 90

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +   +Q  P++       ++    +P + + A  A       +  + +       L  + 
Sbjct: 91  VAVTLQVTPLVAIGPLMTIWAGIEHPQRAVVALAAV------AAFFPIFSGALTGLKAVD 144

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            DL  +   +     Q+ W L +P ++P L+    ++        V +E +         
Sbjct: 145 PDLGRLFDLYGARRVQRLWRLRLPSAVPALLEGHKVAAGLAVVGAVVAEFVAGSG---GN 201

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266
            G+   I  A        +  A+  +  +         L  R ++ W
Sbjct: 202 QGLAWRILEASNRLQTARVFAALAVLALLGVALHAVMSLAERRLLAW 248


>gi|78356108|ref|YP_387557.1| phosphate ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218513|gb|ABB37862.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 298

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 24/265 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L++  + +    +     P D +                       L+   +S +
Sbjct: 25  IIVLFLIMIFLFVEGLPLLNVVPPLDFLFGTAWYPTDDPADFGILPMIAGSLAVTGLSSV 84

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVI 132
                  + A       S R+  V+ P+++++Q++P  ++GF    VV  F+    G   
Sbjct: 85  IAIPLGLMTAVYLSEIASPRMRSVVKPLVEMLQALPSVVIGFFGMVVVAPFLQQTFGLAT 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           G  L     +          S+   ++ ++P +L E S +   + WQ    + +P S+PG
Sbjct: 145 GLNLTNAAIMLAFMAVPTITSISEDAIYSVPNELREASLALGATRWQTISRVVLPASLPG 204

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSYIALAIKEQDLLAI 241
           +   +++ MS      +   M+  G  +IP             I + +A A  + D    
Sbjct: 205 ISTAVILGMSRSIGETMVVLMVAGGAAMIPGSLFDPVRPMPASIAAEMAEAPFKSDHYHA 264

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266
           L+A     G++     L+F  +  W
Sbjct: 265 LFA----TGMVLFIFTLMFNILAAW 285



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 74/213 (34%), Gaps = 14/213 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
            Q  +   +  +  I  F  V G+ +      + ++     Y       +     +   +
Sbjct: 17  FQTSAGLCIIVLFLIMIFLFVEGLPLLNVVPPLDFLFGTAWYPTDDPADFGILPMIAGSL 76

Query: 392 VLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV--------FFPLV 437
            +  ++S+I IP+G+           P + S ++P  ++L A P+ V          P +
Sbjct: 77  AVTGLSSVIAIPLGLMTAVYLSEIASPRMRSVVKPLVEMLQALPSVVIGFFGMVVVAPFL 136

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                          ++++ F     I         + PN+ +E + +   T W+    +
Sbjct: 137 QQTFGLATGLNLTNAAIMLAFMAVPTITSISEDAIYSVPNELREASLALGATRWQTISRV 196

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           +LP   P   T  I     +   ++V  + + G
Sbjct: 197 VLPASLPGISTAVILGMSRSIGETMVVLMVAGG 229


>gi|239928204|ref|ZP_04685157.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 246

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 11/159 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +PVG+  G      + +   A    A P+     L V  + +  L   + L +L    
Sbjct: 69  IGLPVGLVTGHTGRGGNALAFVANAARALPSFGLLVLAVLLIGFGLLPVMIPLVVL---- 124

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL        +      + A    +   R    + LP   P  ++G  +A     +
Sbjct: 125 AVPPILVTTYEAVRSVDPSPVDAARGMGMRESRILLRVELPVALPLILSGLRSAAIQIVS 184

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            + ++   S G       GLG YI +   +  + +VV G
Sbjct: 185 TATIAAYVSLG-------GLGRYIVDGLYQRDYEKVVGG 216



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 65/183 (35%), Gaps = 15/183 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +PQ         L A+ ++         +   + R G  L  + +  +++P  G L   
Sbjct: 47  GIPQRLLEHVRYTLLALALATAIGLPVGLVTGHTGRGGNALAFVANAARALPSFGLLVLA 106

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+              L  +  +    V  +  + Y+++ ++     + +R   +   + 
Sbjct: 107 VLLIGFGL--------LPVMIPLVVLAVPPILVTTYEAVRSVDPSPVDAARGMGMRESRI 158

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  +          +  + +G       G+G YI   + ++D  
Sbjct: 159 LLRVELPVALPLILSGLRSAAIQIVSTATIAAYVSLG-------GLGRYIVDGLYQRDYE 211

Query: 240 AIL 242
            ++
Sbjct: 212 KVV 214


>gi|255693909|ref|ZP_05417584.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           finegoldii DSM 17565]
 gi|260620274|gb|EEX43145.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           finegoldii DSM 17565]
          Length = 398

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++ +L F    +   ++    ++   L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILFALPFGLSVSIYMSEVAHPKVRNWLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  L+
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLI 381



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++  +  I+ A    + V I++     P + + ++P  +LL
Sbjct: 160 FPTATPAAQFGFLPLIGGTLWVSLFAILFALPFGLSVSIYMSEVAHPKVRNWLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|332978512|gb|EGK15223.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Psychrobacter sp.
           1501(2011)]
          Length = 189

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 83/191 (43%), Gaps = 10/191 (5%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDV 58
           M   N   P +S+++   I   +  +L++ I  I + +  I +  +P  +  +     D 
Sbjct: 1   MMTSNQKRPQVSKQVISLIKSHILVILILAIWQICVSMQFIPDYLLPSPLQIVEAFIEDF 60

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L Q+A  T +       I L+ +FV +     S+ +  ++ PI+ + Q+IP +     
Sbjct: 61  PLLMQHAKYTLVTAFIGTTIGLIISFVLSICMDLSKTVKELIYPIILLNQTIPTIAIAPL 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++       KV+   LA  F         +T ++     ++ R+   + +S + S +Q
Sbjct: 121 LIIWLGYGITPKVVLVILAVFF--------PITIALVDGYQSVSREHLNLFKSMKASKYQ 172

Query: 179 KFWYLGVPFSM 189
            + +L +P +M
Sbjct: 173 LYRHLKIPSAM 183



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 4/184 (2%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R    +  + L  +  +  ++   W   V    I          +     +D   ++   
Sbjct: 8   RPQVSKQVISLIKSHILVILILAIWQICVSMQFIPDYLLPSPLQIVEAFIEDFPLLMQHA 67

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+    +   I  II   + I +     +   I P   L    P     PL++  + Y
Sbjct: 68  KYTLVTAFIGTTIGLIISFVLSICMDLSKTVKELIYPIILLNQTIPTIAIAPLLIIWLGY 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     +L+I    + I   ++ G  +   +   +  S   + ++ +R++ +P   
Sbjct: 128 G----ITPKVVLVILAVFFPITIALVDGYQSVSREHLNLFKSMKASKYQLYRHLKIPSAM 183

Query: 504 PYYV 507
             ++
Sbjct: 184 GSFL 187


>gi|158424073|ref|YP_001525365.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330962|dbj|BAF88447.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 258

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 10/242 (4%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
               L L        +  + W  +  G  +          +    Y     ++     T+
Sbjct: 12  RPRSLTLQRGVLGIVLFVLAWEGIARGFHLPAYTLPAVSDILASIYAKRAVLLTAAGFTL 71

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              +V  ++ ++I I + I I   P   + + P A  + + P   + PL++        +
Sbjct: 72  TEALVGYVLGALIGIGLAIVITLIPPTRAVLLPAATAINSVPVVAYSPLILLWFGIGMGS 131

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 +++     + +  + +AG         ++  SF          + LP   P   
Sbjct: 132 K----FVMVALAVSFTVFLSALAGFDRVDRRSVDLLRSFGAGRLAILWRLRLPTALPLIA 187

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G   +   +   +IV+E+           GLG  I ++  +  F +V   + +     L
Sbjct: 188 AGLRVSTVRSLIVAIVTEMLG------AYGGLGWVIYQAVLQIDFVQVWGAIFVASAASL 241

Query: 568 AL 569
           A 
Sbjct: 242 AF 243



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            +  ++ FVL    I    H +   T+P     +  I      L   A  T    L   V
Sbjct: 21  GVLGIVLFVLAWEGIARGFH-LPAYTLPAVSDILASIYAKRAVLLTAAGFTLTEALVGYV 79

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +  L     A +         VL+P    + S+P++ +    +++F      K +   LA
Sbjct: 80  LGALIGIGLAIVITLIPPTRAVLLPAATAINSVPVVAYSPLILLWFGIGMGSKFVMVALA 139

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F +F S +             + R   ++ RSF        W L +P ++P +   + 
Sbjct: 140 VSFTVFLSAL--------AGFDRVDRRSVDLLRSFGAGRLAILWRLRLPTALPLIAAGLR 191

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S        + +EM+          G+G  I  A+ + D + +  A+         +  
Sbjct: 192 VSTVRSLIVAIVTEMLG------AYGGLGWVIYQAVLQIDFVQVWGAIFVASAASLAFFG 245

Query: 258 LL 259
           L+
Sbjct: 246 LI 247


>gi|13471602|ref|NP_103168.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14022344|dbj|BAB48954.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 292

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL   A  T    L           + A        L   L+P +   Q+IPIL  
Sbjct: 82  TSSRSLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHVATLDRSLMPWIIASQTIPILAV 141

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    +I   + + +  F    + +T  M + L +      ++  ++  S
Sbjct: 142 APMIIVVLAAIGVTGLIPKAMISTYLSF----FPVTVGMVKGLRSPEIMHLDLMHTYNAS 197

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L VP S+P L  +M ++++      +  E+         + GIG+ +      
Sbjct: 198 ASQTFWKLRVPASVPFLFTSMKVAVAASLVGAIVGEL-----PTGAVAGIGAKLLAGAYY 252

Query: 236 QDLLAILYAMLTMLGVIFLY 255
              + I  A++    V  L 
Sbjct: 253 SQSIDIWSALVAGSIVAALL 272



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 78/193 (40%), Gaps = 3/193 (1%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++     + + I + + I     +   + P+       P     P++
Sbjct: 86  SLVYNAWVTLSSTLLGFAFGTALGIIIAVGIVHVATLDRSLMPWIIASQTIPILAVAPMI 145

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   +  +++  + + + +   ++ G  +      ++  +++ +  + +  +
Sbjct: 146 IVVLAAIGVTGLIPKAMISTYLSFFPVTVGMVKGLRSPEIMHLDLMHTYNASASQTFWKL 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGSFPEVV 556
            +P   P+  T    A   +   +IV E+ +     +    L GAY ++S +   +  +V
Sbjct: 206 RVPASVPFLFTSMKVAVAASLVGAIVGELPTGAVAGIGAKLLAGAYYSQSIDI--WSALV 263

Query: 557 LGVLIMCCFVLAL 569
            G ++    V+ +
Sbjct: 264 AGSIVAALLVMVV 276


>gi|115522136|ref|YP_779047.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
 gi|115516083|gb|ABJ04067.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
          Length = 261

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 81/241 (33%), Gaps = 7/241 (2%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
               +      V       W  +V   AI         +V      D   +      T+ 
Sbjct: 4   ARLSRFALPVVVFAAAIAAWHTIVVVNAIPPYVLPGPGLVASTLIADWGVLSESLLTTLL 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +   + A +  I + I       +   + P+A +L   P     PL++      +L  
Sbjct: 64  TTLQGFVAAGVGGIALAILFNQSRWLEFALLPYAIILQVTPVIAIAPLLLI-----YLPQ 118

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              + +       + +L N   G ++   +   +   +  +  +   ++ LP   P    
Sbjct: 119 PTAVIVCAFIVAFFPVLANTTLGLASVDRNLVGLFRLYGASRLQTLLHLKLPAALPQIFG 178

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A G +   ++V+E+A+          L   IAES+ + + P +   +L++    + 
Sbjct: 179 GLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESSYRLNIPRMFAALLLLSAAGIV 236

Query: 569 L 569
           +
Sbjct: 237 I 237



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 9/179 (5%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++++ I    +P   +    +  D   L +    T L  L   V + +     A L  +S
Sbjct: 27  VVVNAIPPYVLPGPGLVASTLIADWGVLSESLLTTLLTTLQGFVAAGVGGIALAILFNQS 86

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L   L+P   I+Q  P++      ++Y         +    A I   F    + +  +
Sbjct: 87  RWLEFALLPYAIILQVTPVIAIAPLLLIY---------LPQPTAVIVCAFIVAFFPVLAN 137

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
               L ++ R+L  + R +  S  Q   +L +P ++P +   + ++        V +E+
Sbjct: 138 TTLGLASVDRNLVGLFRLYGASRLQTLLHLKLPAALPQIFGGLRIAGGLSLIGAVVAEI 196


>gi|206561835|ref|YP_002232600.1| binding-protein-dependent transport systems inner membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198037877|emb|CAR53821.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia J2315]
          Length = 285

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 256 MIVLAVVALAADYLLTR 272



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 259 LAVVALAADYLLTRIEKRLLKW 280


>gi|146308136|ref|YP_001188601.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145576337|gb|ABP85869.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 386

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 15/193 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q        +   + +SL   F  A    +  R    L  +L+++Q+IP L      + 
Sbjct: 175 WQALGGHLALVGGTLALSLGLGFALALTIGRWPRTQAALYGLLNLLQTIPSLALFGLLIP 234

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L         L         A+ A+    +  +  +   +L  +   + E +R   
Sbjct: 235 VLSYLATQSAALQALGVRGIGWAPALLALVAYSLLPVVRNTQVALQQVDAAVLEAARGMG 294

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S +Q F  + +P ++P ++  + ++        + +  +     ++   G G++I   +
Sbjct: 295 MSRYQLFTRVRLPLALPVIIEGVRIT-------SIQAIGLAAVAALVGAQGFGTFIFQGL 347

Query: 234 KEQDLLAILYAML 246
            +  +  +L   L
Sbjct: 348 GQGAMDLVLLGAL 360



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 23/242 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L+     R+  +  +    +   +    AW S+  +     Y       W        +V
Sbjct: 129 LRQRLGGRLWLIGPLLLLLLSAVLIASGAWDSLALMRE---YAGRSRQFWQALGGHLALV 185

Query: 392 VLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +  S+ +   + + IG  P   + +     LL   P+   F L++  +SY       
Sbjct: 186 GGTLALSLGLGFALALTIGRWPRTQAALYGLLNLLQTIPSLALFGLLIPVLSYLATQSAA 245

Query: 451 W------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          L ++  +   ++ N             E A    ++ ++ +  + 
Sbjct: 246 LQALGVRGIGWAPALLALVAYSLLPVVRNTQVALQQVDAAVLEAARGMGMSRYQLFTRVR 305

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G           SI +   +     +   G G +I +   +G+   V+LG
Sbjct: 306 LPLALPVIIEGVRIT-------SIQAIGLAAVAALVGAQGFGTFIFQGLGQGAMDLVLLG 358

Query: 559 VL 560
            L
Sbjct: 359 AL 360


>gi|21226397|ref|NP_632319.1| glycine betaine transport system, permease [Methanosarcina mazei
           Go1]
 gi|20904654|gb|AAM29991.1| Glycine betaine transport system, permease protein [Methanosarcina
           mazei Go1]
          Length = 206

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 75/201 (37%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +          +A+++  L +     L+  + +L  +++   +++Q++P    +  
Sbjct: 5   AEILEATLEHLFLAYTALLVGALVSVPLIFLSLYNAKLASLVMRFSNLVQAVPSFAVVAV 64

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V      +          A+ AI    +  +  + Y  L N+   L + ++   ++ +Q
Sbjct: 65  VVPLIGIGF--------FPAVIAIMLRVLLPIVKNTYIGLFNVDPALLDSAKGIGMTDFQ 116

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P + P +   +        F  + +  I V   +I   G+GS I   +   + 
Sbjct: 117 VLRYVRLPNAYPAIFAGIK-------FAAILANSIAVLTALIGGGGLGSMIFEGLTNFNT 169

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             IL   L ++ +    D   
Sbjct: 170 SKILAGTLPVILIALFLDFFF 190



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 76/187 (40%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F     +++ +++ +P+     +   ++S +  F+ L+ A P+     +VV  +     
Sbjct: 15  LFLAYTALLVGALVSVPLIFLSLYNAKLASLVMRFSNLVQAVPSFAVVAVVVPLIGIGFF 74

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + + L ++      I+ N   G         + A    +T ++  RY+ LP  +P  
Sbjct: 75  PAVIAIMLRVLL----PIVKNTYIGLFNVDPALLDSAKGIGMTDFQVLRYVRLPNAYPAI 130

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G   A   A + ++++ +   G       GLG+ I E     +  +++ G L +    
Sbjct: 131 FAGIKFAAILANSIAVLTALIGGG-------GLGSMIFEGLTNFNTSKILAGTLPVILIA 183

Query: 567 LALNRFL 573
           L L+ F 
Sbjct: 184 LFLDFFF 190


>gi|218133473|ref|ZP_03462277.1| hypothetical protein BACPEC_01338 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990848|gb|EEC56854.1| hypothetical protein BACPEC_01338 [Bacteroides pectinophilus ATCC
           43243]
          Length = 247

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    L + ++ L    + A L   S  +  +L P L I+ S+P        +V+ 
Sbjct: 53  HTGITLAETLLSFILVLTAGILLAILLWASDTVSGILEPYLVILNSLPKSALAPVLIVWL 112

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N             I    +  V+    ++Y S   I  +  ++ +    +     + L
Sbjct: 113 GNN--------PKTIIVTAVSIAVFGTIINLYTSFSQIDSEKIKLIKMLGGNRLDVLFRL 164

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P ++ N  +++      V+  E +          G+G  I    +   +  +L 
Sbjct: 165 ILPSSLPIIISNAKVNIGLCLVGVIIGEFLA------ARRGLGFLIIYGSQTFKMNWVLM 218

Query: 244 AMLTMLGVIFLYDQLLFR 261
           +++ +  +  +   +L R
Sbjct: 219 SIVILCIIAGVLYLILNR 236



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 73/201 (36%), Gaps = 11/201 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     IT+   ++  I+     I + I +     +S  ++P+  +L + P +   P+
Sbjct: 48  GDIFIHTGITLAETLLSFILVLTAGILLAILLWASDTVSGILEPYLVILNSLPKSALAPV 107

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +        +    + +FGT    + N+    S   ++  ++              
Sbjct: 108 LIVWLGNNPKTIIVTAVSIAVFGT----IINLYTSFSQIDSEKIKLIKMLGGNRLDVLFR 163

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP   P  ++ A    G      I+ E  +         GLG  I   ++      V+
Sbjct: 164 LILPSSLPIIISNAKVNIGLCLVGVIIGEFLA------ARRGLGFLIIYGSQTFKMNWVL 217

Query: 557 LGVLIMCCFVLALNRFLWHPL 577
           + ++I+C     L   + + L
Sbjct: 218 MSIVILCIIAGVL-YLILNRL 237


>gi|218530010|ref|YP_002420826.1| binding-protein-dependent transporters inner membrane component
           [Methylobacterium chloromethanicum CM4]
 gi|218522313|gb|ACK82898.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium chloromethanicum CM4]
          Length = 305

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   V          +++   +T+   +    + S++ I + + I     + + + P+  
Sbjct: 77  LSRSVLGVPLSSKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIV 136

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  +    L   L  +++  +   + +   ++ G +A     +++ 
Sbjct: 137 ASQTVPILAVAPIIIVALGAAGLTGLLPKAVIAAYLCFFPVTVGMVKGLNAPDRIQRDLM 196

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    +  P   PY       A   +   +IV+E+ +         GLGA +
Sbjct: 197 RTYSASRGQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQ-----AGLGARL 251

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 252 LAGSYYGQTIQIW 264



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L+   +  L     A      R +   L+P +   Q++PIL   
Sbjct: 88  SKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIVASQTVPILAVA 147

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V         ++   + A +  F    + +T  M + L    R   ++ R++  S 
Sbjct: 148 PIIIVALGAAGLTGLLPKAVIAAYLCF----FPVTVGMVKGLNAPDRIQRDLMRTYSASR 203

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P ++P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 204 GQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQA-----GLGARLLAGSYYG 258

Query: 237 DLLAIL 242
             + I 
Sbjct: 259 QTIQIW 264


>gi|163851159|ref|YP_001639202.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|163662764|gb|ABY30131.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
          Length = 302

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   V          +++   +T+   +    + S++ I + + I     + + + P+  
Sbjct: 77  LSRSVLGVPLSSKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIV 136

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  +    L   L  +++  +   + +   ++ G +A     +++ 
Sbjct: 137 ASQTVPILAVAPIIIVALGAAGLTGLLPKAVIAAYLCFFPVTVGMVKGLNAPDRIQRDLM 196

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    +  P   PY       A   +   +IV+E+ +         GLGA +
Sbjct: 197 RTYSASRGQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQ-----AGLGARL 251

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 252 LAGSYYGQTIQIW 264



 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L+   +  L     A      R +   L+P +   Q++PIL   
Sbjct: 88  SKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIVASQTVPILAVA 147

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V         ++   + A +  F    + +T  M + L    R   ++ R++  S 
Sbjct: 148 PIIIVALGAAGLTGLLPKAVIAAYLCF----FPVTVGMVKGLNAPDRIQRDLMRTYSASR 203

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P ++P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 204 GQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQA-----GLGARLLAGSYYG 258

Query: 237 DLLAIL 242
             + I 
Sbjct: 259 QTIQIW 264


>gi|116490623|ref|YP_810167.1| ABC-type phosphate transport system, permease component [Oenococcus
           oeni PSU-1]
 gi|116091348|gb|ABJ56502.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Oenococcus oeni PSU-1]
          Length = 319

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 19/257 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++   L GI         V          +L   A    +      ++S L    +A  
Sbjct: 56  GLMAFTLDGINPFKFIFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIA 115

Query: 90  AAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAI 139
            A       S     ++ P+++++  IP + +    L   V +    + G   G  LA  
Sbjct: 116 TALFMVELQSNWGKKIMQPVVELLVGIPSVVYGFIGLIVVVPFLRKTFGGSGFGI-LAGT 174

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  +T     +L N+P    E++ +   + WQ  + + +  + PG++  ++  
Sbjct: 175 IVLFVMILPTITSLTVDALRNVPNHYRELALAIGATRWQMIYKVILRAATPGILTAVVFG 234

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPG-------IGSYIALAIKEQDLLAILYAMLTMLGVI 252
           M+  +   +A +M+ VG+  I   G       + S +   I      ++   +L  L  +
Sbjct: 235 MARAFGEALAVQMV-VGNAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLATL 293

Query: 253 FLYDQLLFRPMIVWSNK 269
            L   L F  +I +  K
Sbjct: 294 LLIMSLFFNLIIRFIGK 310



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 27/241 (11%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
             G + N  T      + +     +    ++ ++++++  P  I                
Sbjct: 71  IFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIATALFMVELQSNWGKK 130

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +QP  +LL   P+ V+  + +  V       +      +    +++F      + +  +
Sbjct: 131 IMQPVVELLVGIPSVVYGFIGLIVVVPFLRKTFGGSGFGILAGTIVLFVMILPTITSLTV 190

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                 PN ++E+A +   T W+    +IL    P  +T  +     A+  ++  ++   
Sbjct: 191 DALRNVPNHYRELALAIGATRWQMIYKVILRAATPGILTAVVFGMARAFGEALAVQMVVG 250

Query: 530 GH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                             + T G+G     S +      +   +LIM  F   + RF+  
Sbjct: 251 NAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLATLLLIMSLFFNLIIRFIGK 310

Query: 576 P 576
            
Sbjct: 311 R 311


>gi|329117384|ref|ZP_08246101.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parauberis NCFD 2020]
 gi|326907789|gb|EGE54703.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           parauberis NCFD 2020]
          Length = 311

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FVVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +L+ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 VRSLFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 15/161 (9%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVF--------FPL 436
            V+ I+++II  P  +G  +        + +  +QP  +LL   P+ V+         P 
Sbjct: 92  FVVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V S            + +L +      + F  +    A P  ++E + +   T W+    
Sbjct: 152 VRSLFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLKAVPRHYREASMAMGATRWQTIWR 210

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++L    P   T  I     A+  ++  ++       + T+
Sbjct: 211 VVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPTS 251


>gi|254501874|ref|ZP_05114025.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222437945|gb|EEE44624.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 307

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 87/215 (40%), Gaps = 16/215 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  ++  T    L   +I  L   + A     SR L   L+P +   Q+IPIL  
Sbjct: 98  TSKRSLIYHSGITLSSTLLGFLIGTLLGILLAVGIVHSRVLDKSLMPWVISSQTIPILAI 157

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + + +  F    + +T  M + L +      ++  ++  +
Sbjct: 158 APMIIVVLNAVGISGLLPKAMISTYLSF----FPVTVGMVKGLRSPEVIHMDLMHTYSAT 213

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P+++P L  +M + M+      +  E+         + G+G+ +      
Sbjct: 214 RLQAFWKLRLPYAVPYLFTSMKIGMAASLVGAIVGEL-----PTGAIAGLGARLLAGSYY 268

Query: 236 QDLLAILYAML-------TMLGVIFLYDQLLFRPM 263
              + I  A+L       +++ +I + ++++ + M
Sbjct: 269 GQTVQIWSALLMAAFLAGSLVALIGVLEKIVLKRM 303



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 77/196 (39%), Gaps = 5/196 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   IT+   ++  +I +++ I + + I     +   + P+       P     P++
Sbjct: 102 SLIYHSGITLSSTLLGFLIGTLLGILLAVGIVHSRVLDKSLMPWVISSQTIPILAIAPMI 161

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + +   ++ G  +      ++  ++  T  + +  +
Sbjct: 162 IVVLNAVGISGLLPKAMISTYLSFFPVTVGMVKGLRSPEVIHMDLMHTYSATRLQAFWKL 221

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY  T        +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 222 RLPYAVPYLFTSMKIGMAASLVGAIVGELPTGA-----IAGLGARLLAGSYYGQTVQIWS 276

Query: 558 GVLIMCCFVLALNRFL 573
            +L+      +L   +
Sbjct: 277 ALLMAAFLAGSLVALI 292


>gi|167892150|ref|ZP_02479552.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
          Length = 282

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  I  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLLQVWVTLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADFLLTR 269



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADFLLTRLEKRLLKW 277


>gi|67641560|ref|ZP_00440336.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76810777|ref|YP_331669.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|121601518|ref|YP_994554.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124384169|ref|YP_001027830.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126438599|ref|YP_001057095.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126451007|ref|YP_001082222.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126453348|ref|YP_001064325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|134281567|ref|ZP_01768275.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|167001627|ref|ZP_02267421.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|167717407|ref|ZP_02400643.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
 gi|167736449|ref|ZP_02409223.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167813524|ref|ZP_02445204.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167822068|ref|ZP_02453539.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167843676|ref|ZP_02469184.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167900662|ref|ZP_02487867.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167908881|ref|ZP_02495972.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|167916920|ref|ZP_02504011.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|217423986|ref|ZP_03455486.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|226193010|ref|ZP_03788620.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814433|ref|YP_002898884.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242315368|ref|ZP_04814384.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254184103|ref|ZP_04890694.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|254186568|ref|ZP_04893085.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254206617|ref|ZP_04912968.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254259131|ref|ZP_04950185.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254298629|ref|ZP_04966080.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|254357350|ref|ZP_04973624.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|76580230|gb|ABA49705.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|121230328|gb|ABM52846.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124292189|gb|ABN01458.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126218092|gb|ABN81598.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126226990|gb|ABN90530.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|126243877|gb|ABO06970.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134247234|gb|EBA47320.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|147752159|gb|EDK59225.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148026414|gb|EDK84499.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|157808580|gb|EDO85750.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157934253|gb|EDO89923.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184214635|gb|EDU11678.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|217393049|gb|EEC33071.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|225934610|gb|EEH30587.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504773|gb|ACQ97091.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238522513|gb|EEP85957.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242138607|gb|EES25009.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|243062637|gb|EES44823.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|254217820|gb|EET07204.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 282

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  I  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLLQVWVTLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADFLLTR 269



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADFLLTRLEKRLLKW 277


>gi|323220682|gb|EGA05128.1| hypothetical protein SEEM0047_11896 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
          Length = 345

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
             +  + +   ++ +L            S      +  +L+++Q+IP     G L   + 
Sbjct: 137 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 196

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P              A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 197 GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 256

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 257 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 309

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 310 AIDLVLLGVIPVIALAVVIDALF 332



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 92/257 (35%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 85  DAIRRITTGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 144

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 145 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 202

Query: 449 NLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
               +              ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 203 PWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 262

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++V+ +   G       G GA + +     +   V+
Sbjct: 263 VQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSAIDLVL 315

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 316 LGVIPVIALAVVIDALF 332


>gi|298290648|ref|YP_003692587.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296927159|gb|ADH87968.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 250

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 82/220 (37%), Gaps = 14/220 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F + A +L +    + L  +    +P  +     +  +   L   A+ T   ML  +V  
Sbjct: 8   FAVTALLLGLWEAAVRLLNVPAYILPGPLRIGAALWDNAAILAHNAAITLGEMLLGLVCG 67

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
            +     A   A S     ++ P+L + Q++P+       V++F      K++ A L   
Sbjct: 68  SVLGIACALAMAASPLARRMMRPVLLVAQALPVFAIAPLLVIWFGFGLASKIVMASLIIF 127

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F + ++         +  L    + L +++R           Y+ +P ++P L   + ++
Sbjct: 128 FPVASA--------FHDGLARAEQSLVDIARLHGAGTLATLRYIRIPSALPALASGLRVA 179

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +      VA    VVG+ V    G+G  +  +       
Sbjct: 180 TA------VAPIGAVVGEWVGASAGLGYLMIYSNARMQTD 213



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 10/214 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V+ +L   W   V  + +          +    + +   +     IT+  +++ ++  S+
Sbjct: 10  VTALLLGLWEAAVRLLNVPAYILPGPLRIGAALWDNAAILAHNAAITLGEMLLGLVCGSV 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           + I   + +   P     ++P   +  A P     PL+V    +   +  +  SL++ F 
Sbjct: 70  LGIACALAMAASPLARRMMRPVLLVAQALPVFAIAPLLVIWFGFGLASKIVMASLIIFF- 128

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +      G +       ++A           RYI +P   P   +G   A   A  
Sbjct: 129 ---PVASAFHDGLARAEQSLVDIARLHGAGTLATLRYIRIPSALPALASGLRVATAVAPI 185

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            ++V E          + GLG  +  S  +    
Sbjct: 186 GAVVGEWVG------ASAGLGYLMIYSNARMQTD 213


>gi|242399861|ref|YP_002995286.1| Osmoprotection protein (proW-2) [Thermococcus sibiricus MM 739]
 gi|242266255|gb|ACS90937.1| Osmoprotection protein (proW-2) [Thermococcus sibiricus MM 739]
          Length = 209

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +           A+ ++L+       +  K  ++  +   IL++++++P L  L  
Sbjct: 10  QNLTKRTVEHLWMFGVALGLALIIGVFLGFVLYKRPKIAALTFNILNVIETVPTLALLVL 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +              E   I A     +  +  + Y  L ++ R   EV+ +  LS  +
Sbjct: 70  FLPILGLG--------EKPTIAASVLYSILPIARNTYTGLTSVERSYLEVAEAIGLSERE 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + +  P ++P +   + +++      V    ++  G    P       I   I   D 
Sbjct: 122 ILFKVRFPLALPLIAAGVRIAVVFTMGVVTLGGLVAAGGLGAP-------IQTGIHLYDR 174

Query: 239 LAILYAMLTMLGVIFLYD 256
             I+   L +  +  + D
Sbjct: 175 DIIVVTGLWVGILALILD 192



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   V + +A II + +G  +  RP I++       ++   P      L +  +     
Sbjct: 20  LWMFGVALGLALIIGVFLGFVLYKRPKIAALTFNILNVIETVPTLALLVLFLPILGLGEK 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L  I      I  N   G ++    + EVA +  ++       +  P   P  
Sbjct: 80  PTIAASVLYSIL----PIARNTYTGLTSVERSYLEVAEAIGLSEREILFKVRFPLALPLI 135

Query: 507 VTGAITACGGAWNAS 521
             G   A        
Sbjct: 136 AAGVRIAVVFTMGVV 150


>gi|110667926|ref|YP_657737.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [Haloquadratum walsbyi DSM 16790]
 gi|109625673|emb|CAJ52105.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [Haloquadratum walsbyi DSM 16790]
          Length = 223

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 88/215 (40%), Gaps = 17/215 (7%)

Query: 42  TTVPRDIVDIVPITLDVH---SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
              P  ++  +P+ L      +L  +  ++ LR+L A + +L+   V   + A+ R    
Sbjct: 5   LPGPAAVIGRIPLLLVPGPGGNLITHLVQSLLRVLGAGITALMLATVIGIVMAQHRSAEW 64

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            + P L +  +IP L  +  T+V F          +E A I A         T ++++  
Sbjct: 65  AISPWLPLAMTIPTLVVVLVTMVLFQ--------FSEAAVITATVLVTTPYATVTVWEGA 116

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +  D+  V+ ++ ++ W     + +P   P ++ +     S  W  VV +E   +   
Sbjct: 117 RTVDSDILAVAATYDVNSWAILREIYIPAIAPAVLGSARYLASMVWKVVVLAETFGMSV- 175

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
                G+G+       + DL A+L A+   + V+ 
Sbjct: 176 -----GMGAVFRFWYGQGDLEAVLAALFVFVFVMI 205



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 10/207 (4%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            IG I           +I     ++ RV+   I A ++   +GI +         I P+ 
Sbjct: 11  VIGRIPLLLVPGPGGNLITHLVQSLLRVLGAGITALMLATVIGIVMAQHRSAEWAISPWL 70

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            L    P  V   + +    +          L+    T  Y    V  GA    +D   V
Sbjct: 71  PLAMTIPTLVVVLVTMVLFQFSEAAVITATVLV----TTPYATVTVWEGARTVDSDILAV 126

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A+++ +  W   R I +P I P  +  A       W   +++E          + G+GA 
Sbjct: 127 AATYDVNSWAILREIYIPAIAPAVLGSARYLASMVWKVVVLAETFG------MSVGMGAV 180

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 +G    V+  + +    ++ +
Sbjct: 181 FRFWYGQGDLEAVLAALFVFVFVMIGI 207


>gi|326332837|ref|ZP_08199095.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325949395|gb|EGD41477.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 259

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 10/239 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L +   V  +    W   V  + IG  +      V     +    +     +T    + 
Sbjct: 7   RLLAPLVVGLLGVALWALTVDVLGIGTFFLPGPGEVVTALGESWEPIRAAFRVTAVNSLW 66

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +   +++ I +             + P   +LA  P     PL+ + +     +P    
Sbjct: 67  GLAAGAVLGIALAGIAATARLFDGMLGPLVAVLAVIPIVAIAPLLYTMLGTDQESPRR-- 124

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            ++        +  N + G        +++  ++     + +R + LP   PY +TG   
Sbjct: 125 -IIGGIAAFVPVFVNTLRGLRQTTPLQRDLMRTYAAGPVQRFRTVTLPVAIPYALTGLRV 183

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES--TEKGSFPEVVLGVLIMCCFVLAL 569
           A   A  +++V+E            GLG+ I  +  T        V G +++   V A+
Sbjct: 184 AGSLAVISALVAEYFGG-----VNNGLGSAIKNAATTNHARAFAYVGGAIVLGLLVFAI 237



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 87/245 (35%), Gaps = 16/245 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTL 70
           +R + P +  LL   L    +++L  G      P ++V  +  + +     + A R T +
Sbjct: 6   ARLLAPLVVGLLGVALWALTVDVLGIGTFFLPGPGEVVTALGESWEP---IRAAFRVTAV 62

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L  +    +     A +AA +R    +L P++ ++  IPI+                 
Sbjct: 63  NSLWGLAAGAVLGIALAGIAATARLFDGMLGPLVAVLAVIPIVAIAPLLYTMLGTDQESP 122

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                  A F         +  +  + L        ++ R++     Q+F  + +P ++P
Sbjct: 123 RRIIGGIAAFV-------PVFVNTLRGLRQTTPLQRDLMRTYAAGPVQRFRTVTLPVAIP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  + ++ S      + +E     +      G+GS I  A       A  Y    ++ 
Sbjct: 176 YALTGLRVAGSLAVISALVAEYFGGVNN-----GLGSAIKNAATTNHARAFAYVGGAIVL 230

Query: 251 VIFLY 255
            + ++
Sbjct: 231 GLLVF 235


>gi|154705714|gb|ABS84247.1| putative permease [Ochrobactrum sp. G21]
          Length = 286

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 94/249 (37%), Gaps = 17/249 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTFV 85
           L++  + + L  I +  +P        IT  V  L     +T L+ ++   V      F+
Sbjct: 49  LLLWEVTVRLFAIPQVLLPAPSAIWARITASVPILWADFRQTFLKAVIIGYVAGCGLGFI 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A +A +   L   L+P+ ++  ++PI+G     V++F   +  K           +   
Sbjct: 109 TAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQSKAA--------VVIIM 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + M  +    L +      ++  ++  S WQ  + L +P +MP +   + ++ +    
Sbjct: 161 TFFPMLVNTVAGLASTGAMERDMMETYGSSYWQILFKLRLPAAMPFIFNALKINSTLALI 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRP 262
             + +E         P+ G+G  I+  I   ++  +   +        L      L+ R 
Sbjct: 221 GAIVAEFFGT-----PIVGMGFRISAEIGRMNVDMVWAEIFVAALAGSLSYGLIALIERR 275

Query: 263 MIVWSNKFR 271
           M  W   +R
Sbjct: 276 MTFWHPSYR 284



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 18/204 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V++  +    +     I     P +   + P   L AA P     P++V    +   
Sbjct: 92  LKAVIIGYVAGCGLGFITAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQ 151

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + ++I  T + +L N +AG ++     +++  ++  + W+    + LP   P+ 
Sbjct: 152 SK----AAVVIIMTFFPMLVNTVAGLASTGAMERDMMETYGSSYWQILFKLRLPAAMPFI 207

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   + +     
Sbjct: 208 FNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISAEIGRMNVDMVWAEIFVAALAG 262

Query: 567 LALNRF---------LWHPLYLYG 581
                           WHP Y   
Sbjct: 263 SLSYGLIALIERRMTFWHPSYRRA 286


>gi|309791314|ref|ZP_07685837.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308226624|gb|EFO80329.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 213

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 74/197 (37%), Gaps = 15/197 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             R      +A+ ISLL        AA+  R    L+  +  ++ IP L  L   + Y  
Sbjct: 23  LGRHLSLSGTALAISLLLCIPLGIWAARHVRAAQYLITAVGSLRLIPSLAILFLVMPYLG 82

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        AI A+    + ++  ++Y  L  +   + E + +  ++  Q+   + 
Sbjct: 83  TGSTP--------AITALSILAMPSILINVYTGLRGVEPAVIEAASAMGMTSRQRLIQVE 134

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  +          V+AS  +      I   G+G ++       +   +L  
Sbjct: 135 IPLALPVMIAGIRT----ATVEVIASATLAA---FIGAGGLGIFVTRGFALFEPRIMLLG 187

Query: 245 MLTMLGVIFLYDQLLFR 261
            + +  +  L + +L R
Sbjct: 188 AIPVAALALLSEVVLGR 204



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             + I+ ++ IP+GIW       +  +      L   P+     LV+  +          
Sbjct: 32  TALAISLLLCIPLGIWAARHVRAAQYLITAVGSLRLIPSLAILFLVMPYLGTGSTPAITA 91

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LS+L +      IL NV  G         E AS+  +T  +    + +P   P  + G  
Sbjct: 92  LSILAMPS----ILINVYTGLRGVEPAVIEAASAMGMTSRQRLIQVEIPLALPVMIAGIR 147

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA      ++ ++     G       GLG ++           ++LG + +    L    
Sbjct: 148 TATVEVIASATLAAFIGAG-------GLGIFVTRGFALFEPRIMLLGAIPVAALALLSEV 200

Query: 572 FLWH 575
            L  
Sbjct: 201 VLGR 204


>gi|167648408|ref|YP_001686071.1| binding-protein-dependent transporte inner membrane component
           [Caulobacter sp. K31]
 gi|167350838|gb|ABZ73573.1| binding-protein-dependent transport systems inner membrane
           component [Caulobacter sp. K31]
          Length = 272

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 31/259 (11%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPIT--------------LDVHSLPQYASRTTLR 71
           +L + ++ ++    +    PRD +   P                     L      +  R
Sbjct: 22  LLAVALVYLMASQARHAENPRDKLLPTPTAMVEAVRMMARVDPLTGDAPLVVDTVASLRR 81

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A+ IS+    V          L     P++  +  +P +  L    + F        
Sbjct: 82  IGVALAISMGTALVLGLGLGLLPLLRAQFGPLVAAIAVVPPIAILPILFIVFGLG----- 136

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A I  I       M   +   +  IP +    +++   S WQ    + +P +MP 
Sbjct: 137 ---ETAKIALIIIGITPVMVRDLAGQVEAIPEEQLVKAQTLGASTWQLALRVALPQAMPR 193

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+ ++ +S+   W +++++E I          G+G  I L  +   +  IL  ++ +  +
Sbjct: 194 LIDSLRLSLCPAWVYLISAEAIA------ADVGLGYRIFLVRRYLSMDIILPYVVWISIL 247

Query: 252 IFLYDQLL---FRPMIVWS 267
             L D  L    R    W+
Sbjct: 248 AVLMDWALRAFSRRFYPWA 266



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 75/227 (33%), Gaps = 13/227 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
              +++  +           ++     ++ R+ V + I+    + +G+ +G  P + ++ 
Sbjct: 51  AMVEAVRMMARVDPLTGDAPLVVDTVASLRRIGVALAISMGTALVLGLGLGLLPLLRAQF 110

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P    +A  P     P++                 L+I G    ++ ++     A P +
Sbjct: 111 GPLVAAIAVVPPIAILPILFIVFGLGET----AKIALIIIGITPVMVRDLAGQVEAIPEE 166

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A +   + W+    + LP   P  +     +   AW   I +E  +         G
Sbjct: 167 QLVKAQTLGASTWQLALRVALPQAMPRLIDSLRLSLCPAWVYLISAEAIA------ADVG 220

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
           LG  I       S   ++  V+ +    + ++   R      Y +  
Sbjct: 221 LGYRIFLVRRYLSMDIILPYVVWISILAVLMDWALRAFSRRFYPWAH 267


>gi|28377606|ref|NP_784498.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254555784|ref|YP_003062201.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|308179759|ref|YP_003923887.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270439|emb|CAD63341.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254044711|gb|ACT61504.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|308045250|gb|ADN97793.1| phosphate ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 309

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +      ++S L    +A   A        RR   +L P+ +++  IP + +   
Sbjct: 82  ALPMIVGSFLITILSALIATPFAIGTAVFMTEISPRRGAKILRPVTELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +  N + G   G  L+  F +F   +  +T     +L ++PR   E S +   
Sbjct: 142 GLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPTVTSMTADALNSVPRYYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++                 T I
Sbjct: 201 TRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLPHNLVSPAATLTSI 260

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +  +++   L ++   +L M  V  L  + + R
Sbjct: 261 LTMGIGNTVMGSLQNNALWSLAMILLLMSLVFNLVIRYIGR 301



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 75/220 (34%), Gaps = 23/220 (10%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +    ++  +IA+   I   +++        +  ++P  +LL   P+ V+  +
Sbjct: 82  ALPMIVGSFLITILSALIATPFAIGTAVFMTEISPRRGAKILRPVTELLVGIPSVVYGFI 141

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +  V       +      +     ++F      +        ++ P  ++E + +   T
Sbjct: 142 GLQVVVPFVRNTFGGSGYGILSGTFVLFVMILPTVTSMTADALNSVPRYYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT------------ 537
            W+    ++L    P  +T  +     A+  ++  ++       L               
Sbjct: 202 RWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLPHNLVSPAATLTSIL 261

Query: 538 --GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             G+G  +  S +  +   + + +L+M      + R++  
Sbjct: 262 TMGIGNTVMGSLQNNALWSLAMILLLMSLVFNLVIRYIGR 301


>gi|205363943|gb|ACI04472.1| ABC-type glycine betaine transport system-like protein [uncultured
           bacterium RM57]
          Length = 209

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 9/146 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    + +          SAM+ +         L  +  RL   ++   +++Q+IP L  
Sbjct: 7   LHAAEIARLTFEHLWLTASAMLFAAAIGLPLGILLTRRTRLARPVLGFANVLQTIPSLAL 66

Query: 116 LTFTVVYFMNLYPGKVIGAELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                  F  L P   +G   A  AI A+    +  +  + Y  + ++   L +V+ +  
Sbjct: 67  -------FGLLLPVPFLGDRAARLAIVALTGYALLPILRNTYAGIGSVDAALIDVANALG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS 199
           ++GWQ+ + + +P +   ++  +  +
Sbjct: 120 MTGWQRLFKVELPMASSVILAGLRTA 145



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F       +  L    ++     ++ A+ I +P+GI +  R  ++  +  FA +L  
Sbjct: 1   MSEFLRLHAAEIARLTFEHLWLTASAMLFAAAIGLPLGILLTRRTRLARPVLGFANVLQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F L++           L +  L  +     IL N  AG  +      +VA++  
Sbjct: 61  IPSLALFGLLLPVPFLGDRAARLAIVALTGY-ALLPILRNTYAGIGSVDAALIDVANALG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITA 513
           +TGW+    + LP      + G  TA
Sbjct: 120 MTGWQRLFKVELPMASSVILAGLRTA 145


>gi|163736162|ref|ZP_02143581.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
 gi|161390032|gb|EDQ14382.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
          Length = 305

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +  V      +        SL  +   T    L   VI      + A     SR 
Sbjct: 76  LPAPHQVAVELWETTVEKKLTSKRSLIYHGQVTLSATLLGFVIGTGLGILLAVGIVHSRV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P   + Q+IPI+      +V   ++    ++   + + +  F    + +   M 
Sbjct: 136 MDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGILPKAVISAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   ++ +++  S  Q FW L +P SMP L  ++ + ++      +  E+   
Sbjct: 192 KGLRSPDQMQLDLLKTYNASLGQGFWKLRLPASMPYLFASLKIGIAASLVGAIVGEL--- 248

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 249 --PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++  +I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGQVTLSATLLGFVIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVVLYSIGVQGILPKAVISAYLSFFPVVVGMVKGLRSPDQMQLDLLKTYNASLGQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPASMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|194336739|ref|YP_002018533.1| phosphate ABC transporter, inner membrane subunit PstA [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309216|gb|ACF43916.1| phosphate ABC transporter, inner membrane subunit PstA [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 448

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 7/132 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       K   L  +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGVIAAVYFTEYAKPGFLNSMLRSANSTLAGVPSIVFGMFGLAFFINTMKVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++  +P+   E S S   + W     + +P ++PG
Sbjct: 293 SKSVLAGALTLAIMILPTIIRAAEEAILAVPKTYREASLSLGSTKWNTIATVILPAALPG 352

Query: 192 LVWNMMMSMSGG 203
           ++   ++S+   
Sbjct: 353 ILTGGVISLGRA 364



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
             L I A +   P+G+              ++S ++     LA  P+ VF        ++
Sbjct: 227 FFLAIGAMLFAFPLGVIAAVYFTEYAKPGFLNSMLRSANSTLAGVPSIVFGMFGLAFFIN 286

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +        L  +L +       I+        A P  ++E + S   T W     +IL
Sbjct: 287 TMKVSESKSVLAGALTLAIMILPTIIRAAEEAILAVPKTYREASLSLGSTKWNTIATVIL 346

Query: 500 PGIFPYYVTGAITACGGA 517
           P   P  +TG + + G A
Sbjct: 347 PAALPGILTGGVISLGRA 364


>gi|330973009|gb|EGH73075.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 271

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 99/269 (36%), Gaps = 24/269 (8%)

Query: 1   MFLYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPI 54
           M L N  P    R I     F LL F   +G    L     +  +P      D V  +  
Sbjct: 1   MRLINRHPDRAGRLILVILPFALLLFAYFMGSATRLAENPSDKLLPSAVQMADAVKRMAF 60

Query: 55  TLDVHS----LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
             D  S    L Q ++ +  R+   + IS L        A      G  L P+L ++  +
Sbjct: 61  VADPRSGDYLLWQDSASSLQRLAIGLGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMV 120

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L    + F           EL+ +  I       +   + Q    IP +L   ++
Sbjct: 121 PPLAILPILFIVFGLG--------ELSKVMLIVIGITPILARDLEQRAREIPVELLIKAQ 172

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S W     + +P  +P L+  + + +   W F++A+E I   D      G+G  I 
Sbjct: 173 TLGASTWTLILRVILPLLLPRLLIALRLVLGSAWLFLIAAEAIASTD------GLGYRIF 226

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           L  +   +  IL  ++ +  + +L D  L
Sbjct: 227 LVRRYLAMDVILPYVVWITLLAWLMDWGL 255



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              ++ R+ + + I++++ + +GI  G  P   + + P   +L+  P     P++     
Sbjct: 75  SASSLQRLAIGLGISALLGLCLGIAAGILPLCGAPLSPLLTVLSMVPPLAILPILFIVFG 134

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L+      +L++ G    +  ++   A   P +    A +   + W     +ILP +
Sbjct: 135 LGELSK----VMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPLL 190

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  +       G AW   I +E  +       T GLG  I       +   ++  V+ +
Sbjct: 191 LPRLLIALRLVLGSAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWI 244

Query: 563 CCFVLALN 570
                 ++
Sbjct: 245 TLLAWLMD 252


>gi|325289505|ref|YP_004265686.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
 gi|324964906|gb|ADY55685.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobotulus glycolicus DSM 8271]
          Length = 262

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 72/196 (36%), Gaps = 10/196 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +++   ++  G +T  R  +   + + + I + + +           P+  +    P   
Sbjct: 52  FENWDMLLVAGAVTFSRAAIGFALGAAVGIILAVIMSLSKTAERIAFPYLIISQMIPVLG 111

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++ + V    L+      ++  + T + +  N+++G  +   + K++  S     ++
Sbjct: 112 LAPIIFNIVRDMDLS----RIMIAAYITFFPVSVNMLSGLKSVEQEKKDLLFSIAANKFK 167

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  ++ P    +  TG   A   +  ASI+ ++          +G+G  +  S    S 
Sbjct: 168 IYAKLMFPFSLSFLFTGLKIAAPMSVTASILVDMLG------SKSGIGVKMLYSLYSNST 221

Query: 553 PEVVLGVLIMCCFVLA 568
                 V+      + 
Sbjct: 222 DIFWASVMTSALMGII 237



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 77/214 (35%), Gaps = 17/214 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L    + T  R      +      + A + + S+    +  P L I Q IP+LG  
Sbjct: 54  NWDMLLVAGAVTFSRAAIGFALGAAVGIILAVIMSLSKTAERIAFPYLIISQMIPVLGLA 113

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                   ++        +L+ I        + ++ +M   L ++ ++ +++  S   + 
Sbjct: 114 PIIFNIVRDM--------DLSRIMIAAYITFFPVSVNMLSGLKSVEQEKKDLLFSIAANK 165

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           ++ +  L  PFS+  L   + ++        +  +M+          GIG  +  ++   
Sbjct: 166 FKIYAKLMFPFSLSFLFTGLKIAAPMSVTASILVDMLGSKS------GIGVKMLYSLYSN 219

Query: 237 DLLAILYAMLT---MLGVIFLYDQLLFRPMIVWS 267
                  +++T   M  + F    L  R ++ W 
Sbjct: 220 STDIFWASVMTSALMGIISFYLVVLAERILLPWQ 253


>gi|109947293|ref|YP_664521.1| osmoprotection protein [Helicobacter acinonychis str. Sheeba]
 gi|109714514|emb|CAJ99522.1| osmoprotection protein [Helicobacter acinonychis str. Sheeba]
          Length = 551

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +++      +   VA+ +    + Y++  F +   +Y I L       V +  +I  +  
Sbjct: 17  WLIHSVDVAIQHLVAMVLKISVVKYLIKEF-HDRFIYFIDLIAQHFIIVSLSGLIVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +       + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G  I+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSFIIAVFSVLADKFV 236



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 65/183 (35%), Gaps = 15/183 (8%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I L+F  +       + +  + L+P+++ + +IP L      +                
Sbjct: 69  LIVLVFGVLIGVFVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLKN------- 121

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+  +    +  +  S Y +L  +  ++ + +     +  + F+ +    ++P ++  +
Sbjct: 122 -ALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGL 180

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +++      +VA   I        L      I   +  Q+   ++     +     L D
Sbjct: 181 RIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIAVFSVLAD 233

Query: 257 QLL 259
           + +
Sbjct: 234 KFV 236


>gi|119961298|ref|YP_946451.1| glycine betaine/carnitine/choline transport system permease
           [Arthrobacter aurescens TC1]
 gi|119948157|gb|ABM07068.1| Glycine betaine/carnitine/choline transport system permease
           [Arthrobacter aurescens TC1]
          Length = 261

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 82/236 (34%), Gaps = 22/236 (9%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            ++V  ++ + L     T    ++       L+   L        L  ++A  I  L   
Sbjct: 33  LIIVGALLALFLWISSLTLDSIELRT-----LNWDYLADRTREHLLLTVTASAIVSLIAI 87

Query: 85  VYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                 ++  S+ +  V+  I ++ Q+ P +G +    + +   +   ++G    ++  +
Sbjct: 88  PAGIALSRVHSKAVHAVVFGIANVGQATPAIGLVILLAIVWKTGFEVALVGLVAYSVLPV 147

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                     +    L  +   L E ++   +   +    + +P ++P ++  +  +   
Sbjct: 148 LR--------NTLVGLQQVDSSLTEAAKGMGMRPLEVLARIELPLAVPVIIAGLRTA--- 196

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               +V    +    T I   G+G  I   +K Q    ++   + +  +    D L
Sbjct: 197 ----LVFCVGVATVATFINAGGLGDMIVNGLKLQRWPVLITGAVVVSCIALTIDWL 248



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 13/224 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V   +A+ +   S+          +  Y+       +   V    I S+I IP GI +
Sbjct: 34  IIVGALLALFLWISSLTLDSIELRTLNWDYLADRTREHLLLTVTASAIVSLIAIPAGIAL 93

Query: 409 GF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  + + +   A +  A PA     LV+     +     + L  L+ +     +L 
Sbjct: 94  SRVHSKAVHAVVFGIANVGQATPAIG---LVILLAIVWKTGFEVALVGLVAYSVL-PVLR 149

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G     +   E A    +        I LP   P  + G  TA        +    
Sbjct: 150 NTLVGLQQVDSSLTEAAKGMGMRPLEVLARIELPLAVPVIIAGLRTA-------LVFCVG 202

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +     +   GLG  I    +   +P ++ G +++ C  L ++
Sbjct: 203 VATVATFINAGGLGDMIVNGLKLQRWPVLITGAVVVSCIALTID 246


>gi|1109685|gb|AAB01533.1| ProW [Bacillus subtilis]
          Length = 217

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +   L           L A+++ +L       +  + ++    ++ I++I+Q++P  
Sbjct: 8   LQTNGGELLYKTYEHITISLIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPS- 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                +   F+ L        ++ AI A+F   V  +  + Y  +  + ++L E  +   
Sbjct: 67  ---PDSRHIFIPLLGVG----KVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  ++   + VP + P ++  +  S      +   +  I  G       G+G YI + +
Sbjct: 120 MTPAEQVRLVDVPLAAPVIMAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGL 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                  I+   + +  +  + D +L
Sbjct: 173 NLYQPEYIIGGAVPVTILAIVIDYVL 198



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 19/187 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHL 446
           ++ +I+  ++ +P+G+ +      +  I     ++   P+     +F PL+         
Sbjct: 27  LIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSPDSRHIFIPLLGV------- 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   + + F +   IL N   G      +  E      +T     R + +P   P  
Sbjct: 80  -GKVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIGMTPAEQVRLVDVPLAAPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++     G       GLG YI           ++ G + +    
Sbjct: 139 MAGIRTSTIYLIGWATLASFIGGG-------GLGDYIFIGLNLYQPEYIIGGAVPVTILA 191

Query: 567 LALNRFL 573
           + ++  L
Sbjct: 192 IVIDYVL 198


>gi|241258900|ref|YP_002978784.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240863370|gb|ACS61033.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 256

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 71/246 (28%), Gaps = 12/246 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R       + L     +S +L   W     G+   I    +  +       +  +++   
Sbjct: 4   RPLSFAEAIGLPVIGALSLLLAWQWLVPALGIPAYIVPTPLAILRT--LGIEWRFLLSNA 61

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T     +  ++ + + + + I   + P   +   P   L    P     P+++     
Sbjct: 62  VPTWGEAGLGFLLGNSLAVIMAIAFVYNPRFQAAYFPVVLLFNTIPVLALAPIIILIFGL 121

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   ++      +  L N   G +       ++      +GW  +  +  P   
Sbjct: 122 G----MLPKVIIAALICFFPTLVNTARGLNLATASELDLMHVLSASGWETFWRLRAPRSA 177

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P        +       +IV E            GLGA I +ST       +   V++  
Sbjct: 178 PLLFASLRISATTCVIGAIVGEWIG------SNQGLGAVIIQSTFNYQAERLFAAVVLAS 231

Query: 564 CFVLAL 569
              +  
Sbjct: 232 FSGIVF 237



 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 15/240 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            P   +  I   +   L+ +L    +   L GI    VP  +  +  + ++   L   A 
Sbjct: 4   RPLSFAEAIGLPVIGALSLLLAWQWLVPAL-GIPAYIVPTPLAILRTLGIEWRFLLSNAV 62

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T        ++      + A     + R      P++ +  +IP+L      ++ F   
Sbjct: 63  PTWGEAGLGFLLGNSLAVIMAIAFVYNPRFQAAYFPVVLLFNTIPVLALAPIIILIFGLG 122

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              KVI A L   F            +  + L        ++      SGW+ FW L  P
Sbjct: 123 MLPKVIIAALICFF--------PTLVNTARGLNLATASELDLMHVLSASGWETFWRLRAP 174

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S P L  ++ +S              +VG+ +    G+G+ I  +        +  A++
Sbjct: 175 RSAPLLFASLRIS------ATTCVIGAIVGEWIGSNQGLGAVIIQSTFNYQAERLFAAVV 228


>gi|148989520|ref|ZP_01820879.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925063|gb|EDK76144.1| phosphate ABC transporter, permease protein, putative
           [Streptococcus pneumoniae SP6-BS73]
          Length = 305

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIP 111
           +  S    A    L      ++S L    +A  AA      S +   +L P ++++  IP
Sbjct: 70  NPSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L   V +  +++ G   G  L+ I  +F   +  +TF    SL  +PR   E
Sbjct: 130 SVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYRE 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            S +   + WQ  W + +  +  G+   ++  M+  +   +A +M+V    VIP 
Sbjct: 189 ASFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPT 243



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVF-- 433
              + +   +    ++  +IA+   I   +++    P  +  +QP  +LL   P+ V+  
Sbjct: 76  FGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPSVVYGF 135

Query: 434 ------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P V S            +S+L +      + F       A P  ++E + +  
Sbjct: 136 IGLQVVVPFVRSVFGGTGFGILSGISVLFVMI-LPTVTFMTTDSLRAVPRYYREASFAMG 194

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            T W+    +IL        T  +     A+  ++  ++       + T+
Sbjct: 195 ATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIPTS 244


>gi|307544957|ref|YP_003897436.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216981|emb|CBV42251.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 388

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 15/209 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +         L +  A+ +SLL     A       R   +   +L+ +Q+IP L     
Sbjct: 174 GAFVSAIGEHLLLVGVAVSLSLLLGIGLAMAMRHWPRAQRMGFAVLNFLQTIPSLALFGL 233

Query: 119 TVVYFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
            +     L       A L         A+ A+    +  M  + Y +L  +  D+ + +R
Sbjct: 234 LLAPLAWLSGRFEWLAALGVSGIGWAPALLALVGYSLLPMVRNTYVALDEVDPDVIDAAR 293

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +S  Q F  + +P ++P ++  + ++        V +  +     +I   G+G++I 
Sbjct: 294 GMGMSRGQVFRQVRLPLALPVILEGIRIT-------TVQAIGLTAVAALIGAGGLGTFIF 346

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             + +  +  +L   L +L +  + D LL
Sbjct: 347 QGLGQAAMDMVLLGALPILVMALVADALL 375



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 81/253 (32%), Gaps = 26/253 (10%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVL 393
           R    L       +  V +      +   +     +          ++     +  V V 
Sbjct: 131 RTRLALSRVLGWALLLVPLASLTACLALGLEPLALRQEYQGRSGAFVSAIGEHLLLVGVA 190

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + ++ ++ I + + +   P            L   P+   F L+++ +++       WL+
Sbjct: 191 VSLSLLLGIGLAMAMRHWPRAQRMGFAVLNFLQTIPSLALFGLLLAPLAWLSGRFE-WLA 249

Query: 454 LLMIFGTQW-------------YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            L + G  W              ++ N          D  + A    ++  + +R + LP
Sbjct: 250 ALGVSGIGWAPALLALVGYSLLPMVRNTYVALDEVDPDVIDAARGMGMSRGQVFRQVRLP 309

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  + G       A   + V+ +   G       GLG +I +   + +   V+LG L
Sbjct: 310 LALPVILEGIRITTVQAIGLTAVAALIGAG-------GLGTFIFQGLGQAAMDMVLLGAL 362

Query: 561 IMCCFVLALNRFL 573
            +    L  +  L
Sbjct: 363 PILVMALVADALL 375


>gi|291085145|ref|ZP_06352185.2| inner membrane ABC transporter permease protein YehY [Citrobacter
           youngae ATCC 29220]
 gi|291072104|gb|EFE10213.1| inner membrane ABC transporter permease protein YehY [Citrobacter
           youngae ATCC 29220]
          Length = 377

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 82/203 (40%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
            ++    +L  ++ +LL         + S      +  +L+I+Q+IP +      +    
Sbjct: 169 LAQHLTILLGTVIPALLIGVPLGVWCSFSGARQGPVFAVLNIIQTIPSVALFGLLIAPLA 228

Query: 122 ----YFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               YF  L    V G  L  A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 229 GLVKYFPWLGSLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSA 288

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F  +  P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 289 RQRFISVQFPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 341

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 342 AVDLVLLGVIPVVVLAVLIDALF 364



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 95/272 (34%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                 LG++     +   ++       ++L    F +   + +   +  +  +  +   
Sbjct: 102 SGFWLGLGLMLLAASDAIRRITRQALWRWVLHAQLFLMPIVLLLSGTFNDLSLLKEYANR 161

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QDV        +T+   +  +I A +I +P+G+W  F       +     ++   P+   
Sbjct: 162 QDVFNDALAQHLTIL--LGTVIPALLIGVPLGVWCSFSGARQGPVFAVLNIIQTIPSVAL 219

Query: 434 FPLVVSCVSYY------------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++                       + ++      ++  V+AG +  P D  E
Sbjct: 220 FGLLIAPLAGLVKYFPWLGSLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPRDVLE 279

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  ++  + +  +  P   P ++             ++++ +   G       G GA
Sbjct: 280 SARAMGMSARQRFISVQFPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGA 332

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+ +    + ++   
Sbjct: 333 LVFQGLLSSAVDLVLLGVIPVVVLAVLIDALF 364


>gi|157144935|ref|YP_001452254.1| hypothetical protein CKO_00664 [Citrobacter koseri ATCC BAA-895]
 gi|157082140|gb|ABV11818.1| hypothetical protein CKO_00664 [Citrobacter koseri ATCC BAA-895]
          Length = 391

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +   ++ +LL         + +      +  +L+++Q+IP +      +    
Sbjct: 183 LVQHLTLLAGTVLPALLIGVPLGIWCSFATARQGPVFAVLNVIQTIPSVALFGLLIAPLA 242

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L         L         A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 243 GLVKAWPWLGTLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSA 302

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 303 SQRFIHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSS 355

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  L D L 
Sbjct: 356 AVDLVLLGVIPVIALAVLIDALF 378



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 94/257 (36%), Gaps = 21/257 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ +     ++L      +   + +  A+  +  +  +   QD+     +  +T+ 
Sbjct: 131 DAIRRITTQPLWRWLLHAQIALLPLALLLTGAFNDLSLLKEYANRQDIFDNALVQHLTLL 190

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY---- 444
                ++ A +I +P+GIW  F       +     ++   P+   F L+++ ++      
Sbjct: 191 --AGTVLPALLIGVPLGIWCSFATARQGPVFAVLNVIQTIPSVALFGLLIAPLAGLVKAW 248

Query: 445 --------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + + +
Sbjct: 249 PWLGTLGVAGTGLTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSASQRFIH 308

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P ++             ++++ +   G       G GA + +     +   V+
Sbjct: 309 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGLLSSAVDLVL 361

Query: 557 LGVLIMCCFVLALNRFL 573
           LGV+ +    + ++   
Sbjct: 362 LGVIPVIALAVLIDALF 378


>gi|290559723|gb|EFD93048.1| ABC-type anion transport system permease component [Candidatus
           Parvarchaeum acidophilus ARMAN-5]
          Length = 128

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++F ++A     P++  E+   FH+ G   W+ I L  I P  +TGA+T     WNASI+
Sbjct: 3   VIFAIVATTKYMPSNISEIKKIFHLKGITAWKKIYLKAIIPGVITGAVTGIAAEWNASII 62

Query: 524 SEVASWGHIHLRTT---GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
           +E  S G   + T+   G+G  +  + +  +   +V+ +  M   ++ +N F+W  LY 
Sbjct: 63  AEYFSVGSGKVITSVNIGVGKALNLALKNNNLTLMVILLANMVLMIMLINYFIWRRLYN 121



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           + F++  +   +P ++ E+ + F L G   +  + +   +PG++   +  ++  W   + 
Sbjct: 3   VIFAIVATTKYMPSNISEIKKIFHLKGITAWKKIYLKAIIPGVITGAVTGIAAEWNASII 62

Query: 210 SEMIVVGDTVIPLP---GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +E   VG   +      G+G  + LA+K  +L  ++  +  M+ +I L +  ++R +
Sbjct: 63  AEYFSVGSGKVITSVNIGVGKALNLALKNNNLTLMVILLANMVLMIMLINYFIWRRL 119


>gi|265766333|ref|ZP_06094374.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_16]
 gi|263254001|gb|EEZ25466.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_16]
          Length = 398

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 90/228 (39%), Gaps = 20/228 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T    L A++I+L F    +   ++    ++   L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSLFAILIALPFGLSVSIYMSEVADSKVRSWLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V  + LA    +    +  +      ++ N PR + E S +   S WQ  +
Sbjct: 238 LIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +P+S+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPYSISGITSGVVLGVGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283
                  Y  L +LGV+  +  L+          F +E  +      S
Sbjct: 358 APAGGPHYQALFLLGVVLFFITLIIN--------FSVEYISSKGVKRS 397



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T   +   + L   T++  +  I+IA    + V I++       + S ++P  +LL
Sbjct: 160 FPTATPAPLFGFLPLITGTLWVSLFAILIALPFGLSVSIYMSEVADSKVRSWLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+            L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   + W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGASQWQTIYKVVIPYSISGITSGVVLGVGRAIGETMAVLMVTGNAAVIPTT 339


>gi|229198950|ref|ZP_04325637.1| ABC transporter permease protein [Bacillus cereus m1293]
 gi|228584496|gb|EEK42627.1| ABC transporter permease protein [Bacillus cereus m1293]
          Length = 203

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 12  TLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 68

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 69  --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 126

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             ++      G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 127 AIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 168



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            SL  +   T L      ++  +   + AT       L  VL P L ++ ++P +     
Sbjct: 3   GSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWLPLLARVLDPYLVVLNAMPKVALGPI 62

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +V F       +    + +I              +Y +   +  +  +V  +F  + WQ
Sbjct: 63  IIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQ 114

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +  + +P S P ++  + +++   W  V+  E++V         G+G  I+   +  + 
Sbjct: 115 CYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNF 168

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L ++L    +  L    +
Sbjct: 169 TLVLLSVLLTCVLATLMYVFV 189


>gi|91779596|ref|YP_554804.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|296162729|ref|ZP_06845514.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|91692256|gb|ABE35454.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner
           membrane subunit [Burkholderia xenovorans LB400]
 gi|295887045|gb|EFG66878.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 287

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 88/275 (32%), Gaps = 17/275 (6%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
             S           +++    +  +R       L           +D F+F     +   
Sbjct: 15  AASLAQVERVAQKRIRQRHALVITLRIVVLVVVLGGWELSARLKWIDPFFFS----MPSA 70

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           I  Q + + VN  +   +L  +W   +T+    +  II S+  +  GI +G    +S   
Sbjct: 71  IFDQIVDWFVNGTSQGPLLTQVW---VTLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVF 127

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             + ++  + P  V   + V  +     +      +++ F        N   G       
Sbjct: 128 SLYIKIANSIPRVVLGSVFVIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRY 183

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
               A     +  +    +++P    + +     + G A   ++V E            G
Sbjct: 184 MIANAQILGASRRQVTTSVVIPSALSWILASLHVSFGFALVGAVVGEFLG------SKQG 237

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G  I+ +    +   V   ++++    LA +  L
Sbjct: 238 IGLLISTAQGAFNASGVFAAMIVLAVVALAADYLL 272



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 261 LAVVALAADYLLTAVEQRLLKW 282


>gi|331003209|ref|ZP_08326716.1| hypothetical protein HMPREF0491_01578 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412862|gb|EGG92242.1| hypothetical protein HMPREF0491_01578 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 250

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 103/252 (40%), Gaps = 17/252 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L   I  ++L+     + P D++             Q   ++ ++++   +    
Sbjct: 12  VLFALLFWQIAAMILNRSFLLSSPVDVIKASVELGISSVFWQGMGKSIIKIILGFLSGAG 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++A L+ + +   + + P + +++S+P+  F+   +++         +G+E  +I  
Sbjct: 72  IGILFAGLSYRFKIFEIYIAPYIMVIRSVPVASFVIIILIW---------LGSEGLSILV 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +     ++ + L ++   + E+++ F +    K  Y+ +P     L+   + S+ 
Sbjct: 123 CFFMVMPIFYANILEGLKSVDIKMLEMAKIFEIGKKAKLIYIYLPALESFLISAALASIG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258
             +   +A+E+I           +G ++  A    +   +    L ++    ++++L   
Sbjct: 183 IAFKSGIAAEVIGRPKNT-----LGFFLFDAKVYLETAKVFAITLIVILCSAVFERLTVF 237

Query: 259 LFRPMIVWSNKF 270
           +F+       +F
Sbjct: 238 IFKRFFDLIKRF 249



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 88/245 (35%), Gaps = 16/245 (6%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-CITMFRVVVLIIIASIIWIPV 404
           +FW      +       S   ++       +  V W G   ++ ++++  +  + I I  
Sbjct: 17  LFWQIAAMILNRSFLLSSPVDVIKASVELGISSVFWQGMGKSIIKIILGFLSGAGIGILF 76

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
                        I P+  ++ + P   F  +++  +       +  LS+L+ F     I
Sbjct: 77  AGLSYRFKIFEIYIAPYIMVIRSVPVASFVIIILIWLG------SEGLSILVCFFMVMPI 130

Query: 465 LF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            + N++ G  +      E+A  F I       YI LP +  + ++ A+ + G A+ + I 
Sbjct: 131 FYANILEGLKSVDIKMLEMAKIFEIGKKAKLIYIYLPALESFLISAALASIGIAFKSGIA 190

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHPLYLY 580
           +EV            LG ++ ++       +V    LI+        R   F++   +  
Sbjct: 191 AEVIGRPKNT-----LGFFLFDAKVYLETAKVFAITLIVILCSAVFERLTVFIFKRFFDL 245

Query: 581 GTRCL 585
             R  
Sbjct: 246 IKRFY 250


>gi|310814674|ref|YP_003962638.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308753409|gb|ADO41338.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 244

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L   W   V    +          V      +          T++     ++I S + +
Sbjct: 12  LLLAIWQLGVSLSGLNSIVLPAPLPVLMDMLGNPGLYAVNTLQTLWTAFAGLLIGSALGV 71

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            V         ++  + PF  + ++ P     P++   + Y        +  ++     +
Sbjct: 72  LVACLAYASRFLAGVLTPFGLIFSSVPVVALIPIIARILGYGSTT----VIAIVAIAAFF 127

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
                V  G    P    ++         + +  ++LP   P  +         +  A+I
Sbjct: 128 PTFVFVGKGLQQLPRGADDLMRVLGAGRLKRFSRLVLPSAVPDMMIALRLIVPESVLAAI 187

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E        +  +GLG   A++T + +        L++    +  
Sbjct: 188 LAEYL------MGRSGLGYVFAQATSRFAMERAFGVSLVVTLTAVLC 228



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 14/239 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +L I  + + L G+    +P  +  ++ +  +         +T     + ++I    
Sbjct: 10  ILLLLAIWQLGVSLSGLNSIVLPAPLPVLMDMLGNPGLYAVNTLQTLWTAFAGLLIGSAL 69

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A LA  SR L  VL P   I  S+P++  +              +    +AA F  
Sbjct: 70  GVLVACLAYASRFLAGVLTPFGLIFSSVPVVALIPIIARILGYGSTTVIAIVAIAAFFPT 129

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F          + + L  +PR  +++ R       ++F  L +P ++P ++  + + +  
Sbjct: 130 FVF--------VGKGLQQLPRGADDLMRVLGAGRLKRFSRLVLPSAVPDMMIALRLIVPE 181

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                + +E ++         G+G   A A     +       L +     L   L  R
Sbjct: 182 SVLAAILAEYLMG------RSGLGYVFAQATSRFAMERAFGVSLVVTLTAVLCFFLAHR 234


>gi|114328413|ref|YP_745570.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316587|gb|ABI62647.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 277

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + +A+++ + VGI  G  P++ + + P   +++  P     P++      
Sbjct: 80  AASLMRIGIGLTVATLLALLVGIANGILPYVRAGLSPLVAVISMIPPMAVLPILFIIFGL 139

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             L+      +L++ G    ++ N+ A     P +    A +   + W+    ++LP + 
Sbjct: 140 DELSK----VVLIVIGVAPCLMRNLQARVQEMPGEQLIKAQTLGASSWQIIVRVVLPQML 195

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +     + G AW   I +E  +         GLG  I       +   ++  V  + 
Sbjct: 196 PRLIESVRLSLGPAWLFLISAEAIA------ADVGLGYRIFLVRRYLAMDVILPYVAWIT 249

Query: 564 CF 565
             
Sbjct: 250 FL 251



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 71/182 (39%), Gaps = 14/182 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L    + + +R+   + ++ L   +          +   L P++ ++  IP +  L    
Sbjct: 75  LWADTAASLMRIGIGLTVATLLALLVGIANGILPYVRAGLSPLVAVISMIPPMAVLPILF 134

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F           EL+ +  I       +  ++   +  +P +    +++   S WQ  
Sbjct: 135 IIFGLD--------ELSKVVLIVIGVAPCLMRNLQARVQEMPGEQLIKAQTLGASSWQII 186

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P L+ ++ +S+   W F++++E I          G+G  I L  +   +  
Sbjct: 187 VRVVLPQMLPRLIESVRLSLGPAWLFLISAEAIA------ADVGLGYRIFLVRRYLAMDV 240

Query: 241 IL 242
           IL
Sbjct: 241 IL 242


>gi|310828312|ref|YP_003960669.1| phosphate ABC transporter [Eubacterium limosum KIST612]
 gi|308740046|gb|ADO37706.1| phosphate ABC transporter [Eubacterium limosum KIST612]
          Length = 401

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   +  +++I+L    + A      AK  RL   +    + +  IP + F  F + +F+
Sbjct: 189 TLYMVFLSLIIALPIGILAAIYMTEYAKPGRLVNAIRFATECLSGIPSIIFGLFGMAFFV 248

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                ++     +   AI    V  +  S  ++L  +P    E S +   +  Q  + + 
Sbjct: 249 VALKFQISLLSGSLTVAIILLPV--IIRSTEEALKTVPVSYREGSLALGATKLQTVFKVV 306

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PG+V  +++S+ 
Sbjct: 307 LPSAVPGIVTAVLLSIG 323



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF 433
             +      T++ V + +IIA  I I   I++         +       + L+  P+ +F
Sbjct: 180 GGIFSNIITTLYMVFLSLIIALPIGILAAIYMTEYAKPGRLVNAIRFATECLSGIPSIIF 239

Query: 434 --FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             F +    V+       L  SL +       I+ +        P  ++E + +   T  
Sbjct: 240 GLFGMAFFVVALKFQISLLSGSLTVAIILLPVIIRSTEEALKTVPVSYREGSLALGATKL 299

Query: 492 RWWRYIILPGIFPYYVTGAITACG 515
           +    ++LP   P  VT  + + G
Sbjct: 300 QTVFKVVLPSAVPGIVTAVLLSIG 323


>gi|225872299|ref|YP_002753754.1| amine ABC transporter, quaternary amine uptake transporter (QAT)
           family, permease protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225793883|gb|ACO33973.1| amine ABC transporter, quaternary amine uptake transporter (QAT)
           family, permease protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 211

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 53/135 (39%), Gaps = 5/135 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                    +AM+ +            +  R    ++ + +++Q+IP L         F+
Sbjct: 16  TLEHLWLTGAAMLFAAAIGIPTGIALTRRPRWAGPVLAVANVIQTIPSLALF-----GFL 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P     A   AI A+    +  +  + Y  +  I   + +V+R+  L+G Q+ + + 
Sbjct: 71  LPLPWLGERAARIAIVALTAYALLPILRNTYAGIQGIDPAVVQVARALGLTGRQRLFKVE 130

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  +  +
Sbjct: 131 LPLAAPVILAGLRTA 145



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 1/146 (0%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F  Q    +  L    ++     ++ A+ I IP GI +  RP  +  +   A ++  
Sbjct: 1   MSRFLSQYGSQIATLTLEHLWLTGAAMLFAAAIGIPTGIALTRRPRWAGPVLAVANVIQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F  ++           + +  L  +     IL N  AG         +VA +  
Sbjct: 61  IPSLALFGFLLPLPWLGERAARIAIVALTAY-ALLPILRNTYAGIQGIDPAVVQVARALG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITA 513
           +TG +    + LP   P  + G  TA
Sbjct: 120 LTGRQRLFKVELPLAAPVILAGLRTA 145


>gi|284045262|ref|YP_003395602.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283949483|gb|ADB52227.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 258

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 69/227 (30%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
                W+ VV    I          V      D   ++     T    ++   I +++ I
Sbjct: 24  GGIALWWAVVNVFDIEPYVVPPPGDVWKSLTDDFSILMDNLWPTAQEALLGFAIGNLLAI 83

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + I             P A  +   P     P++V        +  +  +L+    T +
Sbjct: 84  AIAIVFVHNKTAERSFFPVAVFVQTLPLVAVAPVLVLMFGNGMGSKVIIAALM----TLF 139

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             L N++ G +A      E+      +    +         P+  +    A   A   +I
Sbjct: 140 PTLVNMVRGFNAISPQTLELFRVLSASKLDVFWKARTFTSLPFLFSSLKIASTSAVVGAI 199

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           ++E            GLG  I  +T     P +   +++   F L L
Sbjct: 200 IAEWIGADK------GLGYLIINATYNFQTPLLYSTMIVASLFALLL 240



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 19/246 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              L   ++N+          P D+   +     +  L      T    L    I  L  
Sbjct: 25  GIALWWAVVNVFDIEPYVVPPPGDVWKSLTDDFSI--LMDNLWPTAQEALLGFAIGNLLA 82

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
              A +   ++       P+   +Q++P++      V+ F N    KVI A L       
Sbjct: 83  IAIAIVFVHNKTAERSFFPVAVFVQTLPLVAVAPVLVLMFGNGMGSKVIIAAL------- 135

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              ++    +M +    I     E+ R    S    FW      S+P L  ++ ++ +  
Sbjct: 136 -MTLFPTLVNMVRGFNAISPQTLELFRVLSASKLDVFWKARTFTSLPFLFSSLKIASTSA 194

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLF 260
               + +E I          G+G  I  A        +   M+       ++F    L+ 
Sbjct: 195 VVGAIIAEWIG------ADKGLGYLIINATYNFQTPLLYSTMIVASLFALLLFAIIGLIE 248

Query: 261 RPMIVW 266
           + ++ W
Sbjct: 249 KLVVTW 254


>gi|152989122|ref|YP_001346601.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150964280|gb|ABR86305.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 220

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ D   V  L    +  V+V + +A ++ +P+G+ +     ++  +Q  A ++   P+
Sbjct: 7   LSHLDWTQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFKWLAGPLQGAATVMLTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              F L++   S +        ++  +   +   IL N     +      +E      +T
Sbjct: 67  IALFGLLMPIYSVFGQGLGPLPAITAVFLYSLLPILRNTYLALTGVEPGIREAGKGIGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+  R + +P   P  + G  TA         ++ V   G       GLG  I  S  +
Sbjct: 127 FWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSISQ 179

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            + P +V+G +++    +  +  L
Sbjct: 180 SNMPMLVVGAVLVSLLAIVADLLL 203



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +L       L  + + L   L     +M +IP +      +  +     G      L AI
Sbjct: 34  ILVGVPLGVLMTRFKWLAGPLQGAATVMLTIPSIALFGLLMPIYSVFGQGLGP---LPAI 90

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+F   +  +  + Y +L  +   + E  +   ++ WQ+   + +P ++P ++  +  +
Sbjct: 91  TAVFLYSLLPILRNTYLALTGVEPGIREAGKGIGMTFWQRLRMVDIPLAVPVILAGVRTA 150

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      +  + +I  G       G+G  I  +I + ++  ++   + +  +  + D LL
Sbjct: 151 VVMNIGVMTIAAVIGAG-------GLGVLILTSISQSNMPMLVVGAVLVSLLAIVADLLL 203


>gi|297192927|ref|ZP_06910325.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297151562|gb|EDY66575.2| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 237

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 76/210 (36%), Gaps = 15/210 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
              Q      D +    I      L +   +     +++++I L   F  A LA    R 
Sbjct: 10  QAAQSCLAANDWICGEYIRSRSQELTEATVQHVWITVASVLIGLAVAFPLALLARARPRF 69

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156
              ++ +  ++ +IP L   +  + +F          +    +  +    +  +  ++  
Sbjct: 70  AGPVLGLTTLLYTIPSLAMFSLLLPFFGL--------SAALVVTGLVLYSLTILVRNIMA 121

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            L  +P +  E +R       +  W + +P ++P L+  + ++        V++  +   
Sbjct: 122 GLEAVPAEAREAARGMGYGPARLLWEVELPLALPALMAGVRIA-------TVSTIALTTV 174

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             ++   G+G+ I   ++      +L A +
Sbjct: 175 GALVGKGGLGNLIDDGVQTTFKAQVLTASV 204



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  V  ++I   +  P+ +    RP  +  +     LL   P+   F L++        
Sbjct: 42  VWITVASVLIGLAVAFPLALLARARPRFAGPVLGLTTLLYTIPSLAMFSLLLPFFGLSAA 101

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG  A P + +E A        R    + LP   P  
Sbjct: 102 LVVTGLVLYSLTI----LVRNIMAGLEAVPAEAREAARGMGYGPARLLWEVELPLALPAL 157

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +   G       GLG  I +  +     +V+   ++
Sbjct: 158 MAGVRIATVSTIALTTVGALVGKG-------GLGNLIDDGVQTTFKAQVLTASVL 205


>gi|167834879|ref|ZP_02461762.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 282

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLLQVWVTLEETIAGFLIGSVAGVFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADFLLTR 269



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETIAGFLIGSVAGVFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADFLLTRLEKRLLKW 277


>gi|302557623|ref|ZP_07309965.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           griseoflavus Tu4000]
 gi|302475241|gb|EFL38334.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           griseoflavus Tu4000]
          Length = 221

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 11/175 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +PVG+  G      + +   A    A P+     L V  + +  L   + L +L I  
Sbjct: 44  IGLPVGLLTGHTGRGGNALAFIANAARALPSFGLLVLAVLLIGFGLLPVMIPLVVLAIP- 102

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL        +      + A    +   R    + +P   P  ++G  +A     +
Sbjct: 103 ---PILVTTYEAVRSVDPAPVDAARGMGMRESRILFRVEVPVALPLVLSGLRSAAIQIVS 159

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
            + ++   S G       GLG YI +   +  + +VV G  ++    LA     W
Sbjct: 160 TATIAAYVSLG-------GLGRYIIDGLYQRDYEKVVGGATLVAVLALATLAVFW 207



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  L   + R G  L  I +  +++P  G L   V+              L  +  
Sbjct: 44  IGLPVGLLTGHTGRGGNALAFIANAARALPSFGLLVLAVLLIGFGL--------LPVMIP 95

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +  + Y+++ ++     + +R   +   +  + + VP ++P ++  +  +  
Sbjct: 96  LVVLAIPPILVTTYEAVRSVDPAPVDAARGMGMRESRILFRVEVPVALPLVLSGLRSAAI 155

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                   +  + +G       G+G YI   + ++D   +     T++ V+ L    +F
Sbjct: 156 QIVSTATIAAYVSLG-------GLGRYIIDGLYQRDYEKV-VGGATLVAVLALATLAVF 206


>gi|291287979|ref|YP_003504795.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885139|gb|ADD68839.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 245

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 87/231 (37%), Gaps = 15/231 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + FVL++     +L G      P     +   +  D   L  +   T +R++SA+V+  +
Sbjct: 12  IIFVLLLWQTASVLSGEFAVASPFSAFPVAFRMITDFSFLKNHMLITAVRVISALVLGSV 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+    A K   +   + P+  ++ +IP +      +++                IF 
Sbjct: 72  TGFILGIFAGKYPLIMQFIEPMRRVLTTIPGIVAAVLAMLWLGLG--------SAMVIFL 123

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  +  ++ +S+        E++  ++LS   +   + +P     L   +++   
Sbjct: 124 NSMFIIPVVYINVAESINKCDNTYIEMADVYQLSTLSRIKNIYIPIVSSALSAALVLVTG 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 V +E++  G+      G+G  + ++    D+ ++   +L     +
Sbjct: 184 NSMRMTVLAEVLGTGE------GLGFVLGISRARLDMPSLYGCVLISFAFV 228



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 10/244 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
           N  +      + ++L ++    V      +A     + V      D  ++     IT  R
Sbjct: 2   NSNRKIQTAGIIFVLLLWQTASVLSGEFAVASPFSAFPVAFRMITDFSFLKNHMLITAVR 61

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  +++ S+    +GI+ G  P I   I+P  ++L   P  V   L +  +        
Sbjct: 62  VISALVLGSVTGFILGIFAGKYPLIMQFIEPMRRVLTTIPGIVAAVLAMLWLGLGSAMVI 121

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              S+ +I      +  NV    +   N + E+A  + ++     + I +P +       
Sbjct: 122 FLNSMFIIPV----VYINVAESINKCDNTYIEMADVYQLSTLSRIKNIYIPIVSSALSAA 177

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +   G +   ++++EV   G       GLG  +  S  +   P +   VLI   FV A 
Sbjct: 178 LVLVTGNSMRMTVLAEVLGTGE------GLGFVLGISRARLDMPSLYGCVLISFAFVWAG 231

Query: 570 NRFL 573
              +
Sbjct: 232 EILI 235


>gi|326330935|ref|ZP_08197235.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioidaceae bacterium Broad-1]
 gi|325951293|gb|EGD43333.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioidaceae bacterium Broad-1]
          Length = 267

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 9/196 (4%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +  L  +T+    +  +    + I   +       + + + P A LL + P     P+V
Sbjct: 66  SLFPLTWVTLKDAGLGFLAGMALAIVAAVLFNLSRTVEAGVMPLALLLRSIPLVAIAPVV 125

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +           + L ++++    +  L  V+ G S       ++ + +  +     R +
Sbjct: 126 MLITGRASTASVVVLGIIVV---LFPALAAVLFGLSQASPQSLDLVAVYGGSRLTAIRKV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LPG  P     A  +  GA   ++++E  S G+      G+G  I +      F ++  
Sbjct: 183 SLPGALPSIFAAARVSVPGAVTGALLAEWLSTGN------GIGGNIQKFPAAARFDDLWA 236

Query: 558 GVLIMCCFVLALNRFL 573
            V I+    L L   +
Sbjct: 237 AVAIITVVTLVLYNLV 252



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 87/258 (33%), Gaps = 22/258 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETT-----VPRDIVDIVPITLDVHSLPQYA 65
           ++R +   +   +A + ++ ++          +      P D+VD +    D  +     
Sbjct: 8   LTRAVLGPVLHTVAALAIVAVLWQAFVSFSSVSEFVAKGPLDVVDHLFTGPDAAAHRASL 67

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA----KSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T   L    +  L     A +AA     SR +   ++P+  +++SIP++      ++
Sbjct: 68  FPLTWVTLKDAGLGFLAGMALAIVAAVLFNLSRTVEAGVMPLALLLRSIPLVAIAPVVML 127

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                       +  + +       ++    ++   L        ++   +  S      
Sbjct: 128 I-------TGRASTASVVVLGIIVVLFPALAAVLFGLSQASPQSLDLVAVYGGSRLTAIR 180

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P +     +S+ G     + +E +  G+      GIG  I           +
Sbjct: 181 KVSLPGALPSIFAAARVSVPGAVTGALLAEWLSTGN------GIGGNIQKFPAAARFDDL 234

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A+  +  V  +   L+
Sbjct: 235 WAAVAIITVVTLVLYNLV 252


>gi|299132800|ref|ZP_07025995.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
 gi|298592937|gb|EFI53137.1| binding-protein-dependent transport systems inner membrane
           component [Afipia sp. 1NLS2]
          Length = 275

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 13/251 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLY 378
              P     L    RV   + +F   +    A     +   YI+   +       +D   
Sbjct: 9   RAMPSQDRPLPQALRVLLPVIVFAVLMGLWEATVRLREIPPYILPAPSLIVQTLVKDWGI 68

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +      T+   +   + A I  + + +       +     P+A +L   P     PL++
Sbjct: 69  LFASLLTTLRATLEGFLAAVIGGVGLALLFNRARWVEDAFLPYAVILQVTPVIAIAPLLL 128

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 +L  +L +         + +L N + G  +   +   + + +  +  +    + 
Sbjct: 129 V-----YLPQHLAVVACAWIVAFFPVLSNTLLGLKSVDRNLAGLFALYDASPAQKLWQLR 183

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY + G   A G +   ++V+E+A+          L   IAE+  +   P +   
Sbjct: 184 LPSALPYIMGGLRIAGGLSLIGAVVAEIAAGSAGSGSG--LAFRIAEAGYRLDIPRMFAA 241

Query: 559 VLIMCCFVLAL 569
           + ++    + +
Sbjct: 242 LALLSAAGIVI 252



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 12/236 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
            P   + R+   +      + +      L   I    +P   + +  +  D   L     
Sbjct: 16  RPLPQALRVLLPVIVFAVLMGLWEATVRLRE-IPPYILPAPSLIVQTLVKDWGILFASLL 74

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L   + +++     A L  ++R +    +P   I+Q  P++      +VY    
Sbjct: 75  TTLRATLEGFLAAVIGGVGLALLFNRARWVEDAFLPYAVILQVTPVIAIAPLLLVY---- 130

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +   LA +   +    + +  +    L ++ R+L  +   +  S  QK W L +P
Sbjct: 131 -----LPQHLAVVACAWIVAFFPVLSNTLLGLKSVDRNLAGLFALYDASPAQKLWQLRLP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            ++P ++  + ++        V +E+            +   IA A    D+  + 
Sbjct: 186 SALPYIMGGLRIAGGLSLIGAVVAEIAAGSAGSGSG--LAFRIAEAGYRLDIPRMF 239


>gi|126737489|ref|ZP_01753219.1| ABC transporter, permease protein [Roseobacter sp. SK209-2-6]
 gi|126720882|gb|EBA17586.1| ABC transporter, permease protein [Roseobacter sp. SK209-2-6]
          Length = 305

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 78/222 (35%), Gaps = 9/222 (4%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           +  A   V  +    L    +         +        SL  +   T    L   VI  
Sbjct: 61  NTFAINRVWSVERPRLPAPHQVAQELWKTTVQKKITSKRSLIYHGQVTLSATLLGFVIGT 120

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               + A     S+ + M ++P   + Q+IPI+      +V   ++    +I   + + +
Sbjct: 121 GLGILLAVGIVHSKVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGIIPKAIISAY 180

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             F    + +   M + L +      ++ +++  S  Q FW L +P SMP L  ++ + +
Sbjct: 181 LSF----FPVVVGMVKGLRSPDAMQLDLLKTYSASTSQGFWKLRLPSSMPYLFASLKIGI 236

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +      +  E+         + G+G+ +         + I 
Sbjct: 237 AASLVGAIVGEL-----PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++  +I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGQVTLSATLLGFVIGTGLGILLAVGIVHSKVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  + + + ++  ++ G  +      ++  ++  +  + +  +
Sbjct: 160 IVVLYSIGVQGIIPKAIISAYLSFFPVVVGMVKGLRSPDAMQLDLLKTYSASTSQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|29828725|ref|NP_823359.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605829|dbj|BAC69894.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 222

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + IA+ I +PVG+  G      + +   A    A P+   F L+V       L    
Sbjct: 35  LMALGIAAAIGLPVGLLTGHTGRGGNALAFLATAARALPS---FGLLVLMFVLLGLGLLP 91

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L++      IL        +      + A    +   +    + +P   P  ++G 
Sbjct: 92  VMIPLVVL-AVPPILVTTYEAMRSVDPSPVDAARGLGMHEAKILFQVEVPVALPLILSGL 150

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +A     + + ++   S G       GLG YI +   + ++ +VV G  ++    L   
Sbjct: 151 RSAAIQIVSTATIAAYVSLG-------GLGRYIVDGLYQRNYEKVVGGATLVAVMALVTL 203

Query: 571 RFLW 574
              W
Sbjct: 204 GLFW 207



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +P+         L A+ I+         L   + R G  L  +    +++P  G L   
Sbjct: 22  GIPRRLLEHIQYSLMALGIAAAIGLPVGLLTGHTGRGGNALAFLATAARALPSFGLLVLM 81

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            V         +    L  +  +    V  +  + Y+++ ++     + +R   +   + 
Sbjct: 82  FV--------LLGLGLLPVMIPLVVLAVPPILVTTYEAMRSVDPSPVDAARGLGMHEAKI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + VP ++P ++  +  +          +  + +G       G+G YI   + +++  
Sbjct: 134 LFQVEVPVALPLILSGLRSAAIQIVSTATIAAYVSLG-------GLGRYIVDGLYQRNYE 186

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            ++     +  +  +   L +
Sbjct: 187 KVVGGATLVAVMALVTLGLFW 207


>gi|77405344|ref|ZP_00782439.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77176022|gb|EAO78796.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 216

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 71/186 (38%), Gaps = 15/186 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +         A+  ++   ++   +++Q+IP L  ++  ++             
Sbjct: 35  GVILAAIVGIPLGIFIARRGKIKTFVMGSANVIQTIPSLAMISIIMLGLGLGI------- 87

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +  +F   +  +  + Y  + N+  DL + ++   ++  Q+ + + +P S+  ++ 
Sbjct: 88  -KTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVIMA 146

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          +V +  I      +   G+G  I       +  AI+ A      ++ +
Sbjct: 147 GLR-------NALVVAIGITAIGAFVGGGGLGDIIIRGTNATNGGAIILAGSLPTALMAI 199

Query: 255 YDQLLF 260
           +  L+ 
Sbjct: 200 FSDLIL 205



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 4/141 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
               V  +I+A+I+ IP+GI+I  R  I + +   A ++   P+     +++  +     
Sbjct: 29  FLISVYGVILAAIVGIPLGIFIARRGKIKTFVMGSANVIQTIPSLAMISIIMLGLGLG-- 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   +   +   I+ N   G     +D  + A    +T  +    + LP      
Sbjct: 87  --IKTVVATVFLYSLLPIITNTYTGIRNVDSDLLDAAKGMGMTKRQRLFMVELPLSISVI 144

Query: 507 VTGAITACGGAWNASIVSEVA 527
           + G   A   A   + +    
Sbjct: 145 MAGLRNALVVAIGITAIGAFV 165


>gi|121609324|ref|YP_997131.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121553964|gb|ABM58113.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 597

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 141/418 (33%), Gaps = 18/418 (4%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +   P  ++ +  A + ++  + +     +M   + NI R+L   + +        FW +
Sbjct: 139 LQDAPANLLYSLGAVLVSMVHALMPLAVLTMLSVMENIDRNLPRAALTLGARPGTAFWRV 198

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P SMPG+    +M       F +   ++     ++    I   I   +++        
Sbjct: 199 YFPLSMPGVAAGAIMVFVTAIGFFIVPALLGGRKEIM----ITQLIIEQVQQTMNWGFAG 254

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           A+  ++ ++ L    ++  ++  S         G   + S +L+   +   L  +G +S 
Sbjct: 255 AISVLMLIVVLAVFAVYDKLLGLSTMAGTSPEHGRPGSRSAMLHRKAQA-LLAALGSASD 313

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA--- 360
              +  S   +   R +G       E    L     V   L       +  + + +A   
Sbjct: 314 RLLALFSRAGRNTGRNIGRNIGRNTEPGRSLPMRAFVVLALLFLSVPALLMIPLSVAGRS 373

Query: 361 ---WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI-IIASIIWIPVGIWIGFRPHISS 416
              W   G+ + ++       +     +    V +    +A +I  P  + +        
Sbjct: 374 GLNWPPSGFSLQYYQELLAAPLWLQAGLRSLIVGLGASALALLIGTPAALLLARSTMRGK 433

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG----TQWYILFNVIAGA 472
            +   A +L+         + V    ++     +  S  ++ G       Y++  ++A  
Sbjct: 434 SLL-LAFVLSPIIVPRMI-IAVGLFYFFAKVGLVGSSFGLMLGHTVIAVPYVVLTMMAVL 491

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
             +       A S     W+  R++  P +    ++  + A   +++   +S  AS G
Sbjct: 492 RNYDMRLDLAAQSLGARPWQTLRHVTFPILAAGLMSSFLFAFATSFDELTISLFASGG 549



 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 3/198 (1%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-QYASRTTLRMLSAMVISL 80
            L+   ++ I   +         P          L    L  Q   R+ +  L A  ++L
Sbjct: 356 FLSVPALLMIPLSVAGRSGLNWPPSGFSLQYYQELLAAPLWLQAGLRSLIVGLGASALAL 415

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L     A L A+S   G  L+    ++  I I+  +   V  F       ++G+    + 
Sbjct: 416 LIGTPAALLLARSTMRGKSLLLAF-VLSPI-IVPRMIIAVGLFYFFAKVGLVGSSFGLML 473

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                 V  +  +M   L N    L+  ++S     WQ   ++  P    GL+ + + + 
Sbjct: 474 GHTVIAVPYVVLTMMAVLRNYDMRLDLAAQSLGARPWQTLRHVTFPILAAGLMSSFLFAF 533

Query: 201 SGGWFFVVASEMIVVGDT 218
           +  +  +  S     G +
Sbjct: 534 ATSFDELTISLFASGGMS 551


>gi|303246164|ref|ZP_07332445.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302492560|gb|EFL52431.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 249

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 13/192 (6%)

Query: 380 IWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            WLG   ++  RV     +   +   +G+  G  P   + + P   +L + P  V   L 
Sbjct: 51  FWLGDLAVSARRVGCGFSLGFAVGGALGLLAGRFPAARTFLAPSRWMLTSVPGVVAVMLG 110

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +             ++L++       I   VI G S       E+A ++  T    + +I
Sbjct: 111 MLWFGLGAGMVVAIVALMVAPA----IHVAVIEGLSTVDATLAEMARAYRFTPLMRFWHI 166

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-V 556
             P +     +G + A GGA   ++++E           TG+G  ++ +      P++  
Sbjct: 167 YAPAMAAPLFSGGVVALGGAMRVAVLAEALG------ANTGIGHALSVARTNLDTPQLYA 220

Query: 557 LGVLIMCCFVLA 568
           L +  M    +A
Sbjct: 221 LALCSMLLVGVA 232



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R+     +          LA +       L P   ++ S+P +  +   +++F    
Sbjct: 59  SARRVGCGFSLGFAVGGALGLLAGRFPAARTFLAPSRWMLTSVPGVVAVMLGMLWFGLGA 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                      +  +       +  ++ + L  +   L E++R++R +   +FW++  P 
Sbjct: 119 G--------MVVAIVALMVAPAIHVAVIEGLSTVDATLAEMARAYRFTPLMRFWHIYAPA 170

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAML 246
               L    ++++ G     V +E +          GIG  +++A    D   +   A+ 
Sbjct: 171 MAAPLFSGGVVALGGAMRVAVLAEALGANT------GIGHALSVARTNLDTPQLYALALC 224

Query: 247 TMLGVIFL 254
           +ML V   
Sbjct: 225 SMLLVGVA 232


>gi|56696663|ref|YP_167024.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
 gi|56678400|gb|AAV95066.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
          Length = 292

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 87/282 (30%), Gaps = 22/282 (7%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
                   + L         T            ++L         + + W  VV G+ + 
Sbjct: 10  ARMMLVLVALLVWGAAWWLNTRLAEGPQAGTRPVRLAVPLIFGATILVVWELVVRGLEVP 69

Query: 359 IAWQSIGYIVN-------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +       ++           + D +     G ++ + +         + +         
Sbjct: 70  LVILPAPSLIAARFAGSLPILWADFVQTFVKGALSGYLIGCGAAFVMAVAVD------RS 123

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +   + P    +AA P     P++V    +   +    + +++ F     +L N +AG
Sbjct: 124 EFLRLGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAG 179

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                   +++  ++  + W+ +  + LP   P+   G   +   A   +IV+E      
Sbjct: 180 LRETTAMQRDLMETYAASYWQSFFKLRLPAAMPFIFNGLKISTTLALIGAIVAEFFGS-- 237

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               T G+G  I+ S  + +   V   +++           +
Sbjct: 238 ---PTLGMGFRISTSVGQLALDMVWAEIVVAALAGTLFYGLV 276



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS  +I     FV A    +S  L + L+P+ + + ++PI+G     V++F   +  K  
Sbjct: 103 LSGYLIGCGAAFVMAVAVDRSEFLRLGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAA 162

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +   F         M  +    L        ++  ++  S WQ F+ L +P +MP +
Sbjct: 163 VVVVMVFF--------PMLVNTVAGLRETTAMQRDLMETYAASYWQSFFKLRLPAAMPFI 214

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      + +E         P  G+G  I+ ++ +  L  +   ++      
Sbjct: 215 FNGLKISTTLALIGAIVAEFFGS-----PTLGMGFRISTSVGQLALDMVWAEIVVAALAG 269

Query: 253 FLYDQLL 259
            L+  L+
Sbjct: 270 TLFYGLV 276


>gi|170737497|ref|YP_001778757.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169819685|gb|ACA94267.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I  +          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLV 239



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +I+ +  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGTIVAVAAGIAV-TRPFGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|84687594|ref|ZP_01015469.1| permease protein of ABC transporter [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664384|gb|EAQ10873.1| permease protein of ABC transporter [Rhodobacterales bacterium
           HTCC2654]
          Length = 253

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 10/213 (4%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   V               V +  + +   ++     T+    V   ++ +    V + 
Sbjct: 21  WEGYVLLTDASALILPAPSDVANGLWVERREILRHALATIGVAGVGFSLSILFAFAVSVT 80

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           + F   +   + P        P     PL+V    +  L       LL+I  T + ++ +
Sbjct: 81  LHFVLWLRRGMMPLLVASQTVPIVALAPLMVLWFGFGLLPK----VLLVILVTFFPMVVS 136

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           ++AG ++ P  F++   S   + W  +R   LP     + +G   +   A  A+I +E A
Sbjct: 137 LMAGYASQPRAFRDQLVSMGASRWAVFRRATLPSARVQFFSGLRISATYAIVATIFAEYA 196

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                     GLG YI  +        V+  V+
Sbjct: 197 GSRQ------GLGIYILTAKNNFRADLVLAAVV 223



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 14/233 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R       L  F L      +LL       +P        + ++   + ++A  T     
Sbjct: 5   RYIYPALVLATFFLAGWEGYVLLTDASALILPAPSDVANGLWVERREILRHALATIGVAG 64

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +S+LF F  +        L   ++P+L   Q++PI+      V++F          
Sbjct: 65  VGFSLSILFAFAVSVTLHFVLWLRRGMMPLLVASQTVPIVALAPLMVLWFGFGL------ 118

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  +  +     + M  S+     + PR   +   S   S W  F    +P +     
Sbjct: 119 --LPKVLLVILVTFFPMVVSLMAGYASQPRAFRDQLVSMGASRWAVFRRATLPSARVQFF 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             + +S +      + +E            G+G YI  A        +L A++
Sbjct: 177 SGLRISATYAIVATIFAEYAG------SRQGLGIYILTAKNNFRADLVLAAVV 223


>gi|170698064|ref|ZP_02889145.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170137025|gb|EDT05272.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 282

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 253 MIVLAVVALAADYLLTR 269



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLLFR---PMIVW 266
           +  V    D LL R    ++ W
Sbjct: 256 LAVVALAADYLLTRIEKRLLKW 277


>gi|75676525|ref|YP_318946.1| substrate-binding region and inner membrane component of ABC-type
           glycine betaine transport system [Nitrobacter
           winogradskyi Nb-255]
 gi|74421395|gb|ABA05594.1| Substrate-binding region and inner membrane component of ABC-type
           glycine betaine transport system [Nitrobacter
           winogradskyi Nb-255]
          Length = 523

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 15/214 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP-- 111
            +  +  LP Y        L+A+ + L  +F  A  A     L   L+    I+Q++P  
Sbjct: 9   WSEALAHLPDYLGNHVRVSLTALALGLAISFPLALTARNRPMLRSALLGFASIVQTMPGL 68

Query: 112 ------ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
                     L   ++       G      L ++ A+    +  +  +    L  I   L
Sbjct: 69  ALLALFYPLLLALAIMTSQWFGFGFSAFGFLPSVLALALYSMLPVLRNTITGLQGIDPAL 128

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +R   ++  Q    + +P ++P ++  +  +    W    A+    +G T      +
Sbjct: 129 TEAARGVGMTARQSLTMVELPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----L 181

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G+YI   ++  + + +L+  +    +  + DQLL
Sbjct: 182 GNYIFAGLQTLNWVFVLFGCIAAAALALVVDQLL 215



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 20/220 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           ++    + + L  +        RV +  + +   I  P+ +    RP + S +  FA ++
Sbjct: 3   LLFDPRWSEALAHLPDYLGNHVRVSLTALALGLAISFPLALTARNRPMLRSALLGFASIV 62

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLW------------LSLLMIFGTQWYILFNVIAGAS 473
              P      L    +    +  + W              L +   +   +L N I G  
Sbjct: 63  QTMPGLALLALFYPLLLALAIMTSQWFGFGFSAFGFLPSVLALALYSMLPVLRNTITGLQ 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    + LP   P  + G  TA    W     +     G   
Sbjct: 123 GIDPALTEAARGVGMTARQSLTMVELPLALPVIMAGIRTAA--VWVIGTATLSTPIGQTS 180

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                LG YI    +  ++  V+ G +      L +++ L
Sbjct: 181 -----LGNYIFAGLQTLNWVFVLFGCIAAAALALVVDQLL 215


>gi|51893766|ref|YP_076457.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51857455|dbj|BAD41613.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 216

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 71/181 (39%), Gaps = 15/181 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +     L A++  +L       L ++ R+L   ++ + + +Q+IP L  + F +
Sbjct: 18  LLGLTIQHVKLALLAVLYGVLVGVPVGYLISRRRKLAEPVLWVANALQTIPALALIGFVM 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++           +    IF +F   +  +  S Y +L +I   L E +    ++ WQ  
Sbjct: 78  LFLGL--------SPATGIFCLFVYSLMPIIRSTYTALISIDPALIEAATGMGMTRWQIL 129

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++  ++  + ++       +V S       ++    G+GS I   I       
Sbjct: 130 RIVQLPLALAVMMVGIRLA-------LVMSIGTASIMSLAGAGGLGSEIFAGIDRVQDKM 182

Query: 241 I 241
           I
Sbjct: 183 I 183



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 4/141 (2%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                ++ L    +   ++ ++   ++ +PVG  I  R  ++  +   A  L   PA   
Sbjct: 13  AHWPRLLGLTIQHVKLALLAVLYGVLVGVPVGYLISRRRKLAEPVLWVANALQTIPALAL 72

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
              V+  +              +   +   I+ +      +      E A+   +T W+ 
Sbjct: 73  IGFVMLFLGLSPATG----IFCLFVYSLMPIIRSTYTALISIDPALIEAATGMGMTRWQI 128

Query: 494 WRYIILPGIFPYYVTGAITAC 514
            R + LP      + G   A 
Sbjct: 129 LRIVQLPLALAVMMVGIRLAL 149


>gi|239831104|ref|ZP_04679433.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239823371|gb|EEQ94939.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 286

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 93/249 (37%), Gaps = 17/249 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTFV 85
           L++  + + L  I +  +P        I   V  L     +T L+ ++   V      F+
Sbjct: 49  LLLWEVTVRLFAIPQVLLPAPSAIWARIAASVPILWADFRQTFLKAVIIGYVAGCGLGFI 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A +A +   L   L+P+ ++  ++PI+G     V++F   +  K           +   
Sbjct: 109 TAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQSKAA--------VVIIM 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + M  +    L +      ++  ++  S WQ  + L +P +MP +   + ++ +    
Sbjct: 161 TFFPMLVNTVAGLASAGAMERDMMETYGSSYWQTLFKLRLPAAMPFIFNALKINSTLALI 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRP 262
             + +E         P+ G+G  I+  I   ++  +   +        L      L+ R 
Sbjct: 221 GAIVAEFFGT-----PIVGMGFRISAEIGRMNVDMVWAEIFVAALAGSLSYGLIALIERR 275

Query: 263 MIVWSNKFR 271
           +  W   +R
Sbjct: 276 LTFWHPSYR 284



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 12/197 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V++  +    +     I     P +   + P   L AA P     P++V    +   
Sbjct: 92  LKAVIIGYVAGCGLGFITAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQ 151

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + ++I  T + +L N +AG ++     +++  ++  + W+    + LP   P+ 
Sbjct: 152 SK----AAVVIIMTFFPMLVNTVAGLASAGAMERDMMETYGSSYWQTLFKLRLPAAMPFI 207

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   + +     
Sbjct: 208 FNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISAEIGRMNVDMVWAEIFVAALAG 262

Query: 567 LA---LNRFLWHPLYLY 580
                L   +   L  +
Sbjct: 263 SLSYGLIALIERRLTFW 279


>gi|330470493|ref|YP_004408236.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328813464|gb|AEB47636.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 228

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 15/175 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T   L A++I+ L     A +A   R L   +V +  ++ ++P L    F   Y      
Sbjct: 36  TTLTLRAVLIATLIAVPLAVVAYWFRPLTGPIVALTGVLYTVPSLALFAFVAPYLGIGVA 95

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    L A+  I          +    L  +P ++ E +       W +   + +P +
Sbjct: 96  TVLSVVVLYALLVIVR--------NTVAGLNQVPAEVREAAEGMGYGRWGRLLRVELPLA 147

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +PG++  + ++        V++  ++    VI   G+G  I          A + 
Sbjct: 148 LPGILTGLRLA-------TVSTVALITVGVVIGRGGLGQIIFAGFNNNFYKAQIM 195



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 11/160 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA++I +P+ +   +   ++  I     +L   P+   F  V   +          +
Sbjct: 42  AVLIATLIAVPLAVVAYWFRPLTGPIVALTGVLYTVPSLALFAFVAPYLGIGVAT----V 97

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             +++      I+ N +AG +  P + +E A       W     + LP   P  +TG   
Sbjct: 98  LSVVVLYALLVIVRNTVAGLNQVPAEVREAAEGMGYGRWGRLLRVELPLALPGILTGLRL 157

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           A       ++ +       + +   GLG  I        +
Sbjct: 158 A-------TVSTVALITVGVVIGRGGLGQIIFAGFNNNFY 190


>gi|227530016|ref|ZP_03960065.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350048|gb|EEJ40339.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 221

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 5/181 (2%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + ++IA  I +P+G        +++    F+Q+L   P+     L++  +        + 
Sbjct: 34  ITLVIAMAIALPLGYIGSRIKTVAAFCTAFSQVLRIIPSLALLFLLIPFIGTGMTPALIA 93

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L +L +         N I G +     +KEV ++  ++  +  R I +P   PY + G  
Sbjct: 94  LVVLALPPLL----INTILGFNEVSPLYKEVGTALGMSRQQLRRQIEIPLALPYILNGIK 149

Query: 512 TACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A      +A++ + + + G   L  TGLG Y       G     +L +L M  F   + 
Sbjct: 150 LALVEIIASATLATYIGAGGLGTLIFTGLGLYDMTYVVIGGVSVAILALLSMAGFDFLIR 209

Query: 571 R 571
           R
Sbjct: 210 R 210



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 76/210 (36%), Gaps = 19/210 (9%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D      Y  +        +VI++        + ++ + +         +++ IP L  
Sbjct: 16  TDSSQYWLYVWQHIYLSGITLVIAMAIALPLGYIGSRIKTVAAFCTAFSQVLRIIPSLAL 75

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +               A+ A+    +  +  +       +    +EV  +  +S
Sbjct: 76  LFLLIPFIGTGMTP--------ALIALVVLALPPLLINTILGFNEVSPLYKEVGTALGMS 127

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 128 RQQLRRQIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 180

Query: 236 QDLLAILYAMLTMLGVIFL----YDQLLFR 261
            D+  ++   +++  +  L    +D L+ R
Sbjct: 181 YDMTYVVIGGVSVAILALLSMAGFDFLIRR 210


>gi|86137288|ref|ZP_01055865.1| ABC transporter, permease protein [Roseobacter sp. MED193]
 gi|85825623|gb|EAQ45821.1| ABC transporter, permease protein [Roseobacter sp. MED193]
          Length = 305

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  +A  T    L   VI      + A     S+ 
Sbjct: 76  LPAPHQVITELWKTTVMKKVTSKRSLVYHAQVTLNATLLGFVIGTGLGILLAVGIVHSKV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P   + Q+IPI+      +V   ++    ++   + + +  F    + +   M 
Sbjct: 136 MDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGILPKAIISAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +      ++ +++  +  Q FW L +P SMP L  ++ + ++      +  E+   
Sbjct: 192 KGLRSPDAMQLDLLKTYSANTNQGFWKLRLPSSMPYLFTSLKIGIAASLLGAIVGEL--- 248

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 249 --PTGAVSGLGARLLAGSYYGQTVQIW 273



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++  +I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLVYHAQVTLNATLLGFVIGTGLGILLAVGIVHSKVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +      ++  ++     + +  +
Sbjct: 160 IVVLYSIGVQGILPKAIISAYLSFFPVVVGMVKGLRSPDAMQLDLLKTYSANTNQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY  T        +   +IV E+ +        +GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFTSLKIGIAASLLGAIVGELPTGA-----VSGLGARLLAGSYYGQTVQIW 273


>gi|186472788|ref|YP_001860130.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
 gi|184195120|gb|ACC73084.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phymatum STM815]
          Length = 287

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q + + VN  +   +L  +W   +T+    +  II S+  +  GI +G    +S     +
Sbjct: 74  QIVDWFVNGTSQGPLLTQVW---VTLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLY 130

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            ++  + P  V   + V  +     +      +++ F        N   G          
Sbjct: 131 IKIANSIPRVVLGSVFVIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIA 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     +  +    +++P    + +     + G A   ++V E            G+G 
Sbjct: 187 NAQILGASRRQVTTSVVIPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGL 240

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I+ +    +   V   ++++    LA +  L
Sbjct: 241 LISTAQGAFNASGVFAAMIVLAVVALAADYLL 272



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 261 LAVVALAADYLLTAVEQRLLKW 282


>gi|221207711|ref|ZP_03580719.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
 gi|221172557|gb|EEE04996.1| ABC transporter, permease protein [Burkholderia multivorans CGD2]
          Length = 285

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           ++++    LA +  L      +  + L
Sbjct: 256 MIVLAVVALAADYLL-----TWVEKRL 277



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 259 LAVVALAADYLLTWVEKRLLKW 280


>gi|161523214|ref|YP_001578226.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189348929|ref|YP_001944557.1| sulfonate/nitrate/taurine transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160340643|gb|ABX13729.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189332951|dbj|BAG42021.1| sulfonate/nitrate/taurine transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 285

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           ++++    LA +  L      +  + L
Sbjct: 256 MIVLAVVALAADYLL-----TWVEKRL 277



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 259 LAVVALAADYLLTWVEKRLLKW 280


>gi|307942258|ref|ZP_07657609.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
 gi|307774544|gb|EFO33754.1| binding-protein-dependent transport systems inner membrane
           component [Roseibium sp. TrichSKD4]
          Length = 383

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 102/263 (38%), Gaps = 24/263 (9%)

Query: 23  LAFVLVIGIINILLH--GIQETTVPRDIVDIVP-----ITLDVHSLPQYASRTTLR-MLS 74
           LA  ++ G   ++L   G+    VPR ++         +T  V +L     +T L+ +L 
Sbjct: 134 LAIPVLFGATFLILWELGVTGAGVPRVLLPAPSEIWIRLTTSVPTLWADFQQTFLKAVLI 193

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I     FV A L  +   L   L+PI +++ ++PI+G     V++F   +P K    
Sbjct: 194 GYAIGCGSAFVVAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSKAA-- 251

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +     + M  +    L        ++ R++  + WQ  + L +P +MP +  
Sbjct: 252 ------VVIIMTFFPMLVNTVSGLAETDAMQRDLMRTYASNYWQTLFKLRLPMAMPFIFN 305

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ +      + +E         P+ G+G  I+  +   ++  +   +        L
Sbjct: 306 ALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWAEIAVAALAGSL 360

Query: 255 ---YDQLLFRPMIVWSNKFRLER 274
              +  LL R +  W    R + 
Sbjct: 361 FYGFVALLERAVTFWHPSMRAKM 383



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 67/187 (35%), Gaps = 9/187 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V++   I       V I +   P +   + P   L++A P     P++V    +   
Sbjct: 188 LKAVLIGYAIGCGSAFVVAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWP 247

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + ++I  T + +L N ++G +      +++  ++    W+    + LP   P+ 
Sbjct: 248 SK----AAVVIIMTFFPMLVNTVSGLAETDAMQRDLMRTYASNYWQTLFKLRLPMAMPFI 303

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   + +     
Sbjct: 304 FNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEVGRMNVDMVWAEIAVAALAG 358

Query: 567 LALNRFL 573
                F+
Sbjct: 359 SLFYGFV 365


>gi|191637829|ref|YP_001986995.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|227535592|ref|ZP_03965641.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239631193|ref|ZP_04674224.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065954|ref|YP_003787977.1| phosphate ABC transporter permease [Lactobacillus casei str. Zhang]
 gi|190712131|emb|CAQ66137.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|227186722|gb|EEI66789.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239525658|gb|EEQ64659.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300438361|gb|ADK18127.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei str. Zhang]
 gi|327381895|gb|AEA53371.1| Phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus casei LC2W]
 gi|327385056|gb|AEA56530.1| Phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus casei BD-II]
          Length = 307

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +      + +I+  F             +    +L P+++++  IP + +    L+  V 
Sbjct: 89  SFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVYGFIGLSVIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  +
Sbjct: 149 FIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGATRWQTTY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 208 RVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGN 242



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 9/168 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +     +  IIA+   +  GI++    R      +QP  +LL   P+ V+  +
Sbjct: 82  ALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVYGFI 141

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +S +       +      +     ++F      +    +    A P  ++E + +   T
Sbjct: 142 GLSVIVPFIRHIFGGTGFGILAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+    ++L    P  +TG +     A+  ++  ++       L   
Sbjct: 202 RWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLPKN 249


>gi|302554941|ref|ZP_07307283.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
 gi|302472559|gb|EFL35652.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
          Length = 221

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 11/175 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +P+G+  G      + +   A    A P+     L+ + + +  L   + L +L    
Sbjct: 44  IGLPIGLVTGHYGRGGNALSLVATAGRALPSFGLLVLMTTLLGFGMLPVMIPLVIL---- 99

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL        +      + A    +   R    + LP   P  ++G  +A     +
Sbjct: 100 AVPPILVTTYEAMRSVDPSPVDAARGMGMHESRILFQVELPVALPLILSGLRSAAIQIVS 159

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
            + ++   S G       GLG YI +   + ++ +VV G  ++    L      W
Sbjct: 160 TATIAAYVSLG-------GLGRYIVDGLYQRNYEKVVGGATLVAVLALVTLALFW 207



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 59/179 (32%), Gaps = 15/179 (8%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +     R G  L  +    +++P  G L                   L  +  
Sbjct: 44  IGLPIGLVTGHYGRGGNALSLVATAGRALPSFGLLVLMTTLLGFGM--------LPVMIP 95

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    V  +  + Y+++ ++     + +R   +   +  + + +P ++P ++  +  +  
Sbjct: 96  LVILAVPPILVTTYEAMRSVDPSPVDAARGMGMHESRILFQVELPVALPLILSGLRSAAI 155

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                   +  + +G       G+G YI   + +++   ++     +  +  +   L +
Sbjct: 156 QIVSTATIAAYVSLG-------GLGRYIVDGLYQRNYEKVVGGATLVAVLALVTLALFW 207


>gi|302556244|ref|ZP_07308586.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302473862|gb|EFL36955.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 220

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 68/188 (36%), Gaps = 11/188 (5%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V+   +     +       +   ++  +IA+ I +P+G+ IG     +      A    
Sbjct: 12  LVSDAQWSGPDGIGHRLAEHLQYSLLATLIAAAIGLPLGLLIGHTGKGAFVAINLASFGR 71

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P      LVV       L+       L+       I+ N  AG +A   D K+ A   
Sbjct: 72  ALPTVG---LVVLVFLAGGLSMLPVYVALVAL-AVPAIVTNTYAGMTAVDPDVKDAARGQ 127

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            + G +   ++ LP   P  +TG   A       + ++   S+G       GLG Y+ + 
Sbjct: 128 GMRGHQVLAHVELPLALPLIMTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDG 180

Query: 547 TEKGSFPE 554
             +    +
Sbjct: 181 LAQRDLVQ 188



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 67/181 (37%), Gaps = 15/181 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +    +      L A +I+         L   + +   V + +    +++P +G   
Sbjct: 21  PDGIGHRLAEHLQYSLLATLIAAAIGLPLGLLIGHTGKGAFVAINLASFGRALPTVG--- 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+ F+      +         A+    V  +  + Y  +  +  D+++ +R   + G 
Sbjct: 78  LVVLVFLAGGLSMLP-----VYVALVALAVPAIVTNTYAGMTAVDPDVKDAARGQGMRGH 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q   ++ +P ++P ++  + +++         +  +  G       G+G Y+   + ++D
Sbjct: 133 QVLAHVELPLALPLIMTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRD 185

Query: 238 L 238
           L
Sbjct: 186 L 186


>gi|146342394|ref|YP_001207442.1| putative glycine betaine/carnitine/choline ABC transporter permease
           and substrate binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146195200|emb|CAL79225.1| putative glycine betaine/carnitine/choline ABC transporter
           (permease and substrate binding protein) [Bradyrhizobium
           sp. ORS278]
          Length = 515

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 82/210 (39%), Gaps = 15/210 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  L  Y        ++A+ + L  +F  A  A  +  L  +L+ +  ++Q++P L  L 
Sbjct: 10  LSHLADYLGSHLRVSIAALGLGLAVSFPLALAARNTPSLRNLLLGLASVVQTVPGLALLA 69

Query: 118 FTVVYFMNLYPGKVI--------GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 + L    +            L A+ A+    +  +  +    L  +   L E +
Sbjct: 70  LFYPLLLALAALSLRWLGLSFSAFGFLPAVLALALYSMLPVLRNTITGLNGVDASLIEAA 129

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +   ++  Q    + +P ++P ++  +  +    W    A+    +G T      +G+YI
Sbjct: 130 KGVGMTERQALTMVELPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LGNYI 182

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              ++ Q+ + +++  +    +    DQLL
Sbjct: 183 FAGLQTQNWVLVVFGCVAAAVLALAVDQLL 212



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 63/204 (30%), Gaps = 20/204 (9%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLII-IASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++   + + L  +     +  RV +  + +   +  P+ +     P + + +   A ++ 
Sbjct: 1   MSDPRFAEALSHLADYLGSHLRVSIAALGLGLAVSFPLALAARNTPSLRNLLLGLASVVQ 60

Query: 427 AFPANVFFPLVVSCVSY------------YHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
             P      L    +              +     L   L +   +   +L N I G + 
Sbjct: 61  TVPGLALLALFYPLLLALAALSLRWLGLSFSAFGFLPAVLALALYSMLPVLRNTITGLNG 120

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E A    +T  +    + LP   P  + G  TA    W     +     G    
Sbjct: 121 VDASLIEAAKGVGMTERQALTMVELPLALPVIMAGIRTAA--VWVIGTATLSTPIGQTS- 177

Query: 535 RTTGLGAYIAESTEKGSFPEVVLG 558
               LG YI    +  ++  VV G
Sbjct: 178 ----LGNYIFAGLQTQNWVLVVFG 197


>gi|326693646|ref|ZP_08230651.1| phosphate ABC transporter permease PstC [Leuconostoc argentinum
           KCTC 3773]
          Length = 307

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 86/221 (38%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF--- 115
           A    +       ++ +    +A   A        +R   ++ PI++++  IP + +   
Sbjct: 83  AMPMIMGSFLVTFLAAIVATPFAIGTALFMTEIAQKRGTKIMQPIIELLVGIPSVVYGFI 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LT  V +   ++ G   G     I   F   +  +T     +L ++PR   E + +   
Sbjct: 143 GLTVVVPFIRTVFGGSGFGILSGTIVL-FVMILPKITSMTVDTLKSVPRHYRESALAIGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  + + +  + PG++  ++  M+  +   +A +M++                 T +
Sbjct: 202 TRWQMIYKVILRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPQNLISPASTLTSV 261

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +  +++   L  +   +L M  V  L  + + R
Sbjct: 262 LTMGIGNTVMGSLQNNVLWTLAMILLLMSLVFNLIVRAIGR 302



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 78/233 (33%), Gaps = 25/233 (10%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQL 424
           ++N  T Q  +  + +   +     +  I+A+   I   +++    +   +  +QP  +L
Sbjct: 71  VINPQTKQPYVGAMPMIMGSFLVTFLAAIVATPFAIGTALFMTEIAQKRGTKIMQPIIEL 130

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
           L   P+ V+         P + +              +L +      I    +    + P
Sbjct: 131 LVGIPSVVYGFIGLTVVVPFIRTVFGGSGFGILSGTIVLFVMI-LPKITSMTVDTLKSVP 189

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH----- 531
             ++E A +   T W+    +IL    P  +T  +     A+  ++  ++          
Sbjct: 190 RHYRESALAIGATRWQMIYKVILRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPQ 249

Query: 532 ---------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                      + T G+G  +  S +      + + +L+M      + R +  
Sbjct: 250 NLISPASTLTSVLTMGIGNTVMGSLQNNVLWTLAMILLLMSLVFNLIVRAIGR 302


>gi|325525517|gb|EGD03316.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. TJI49]
          Length = 285

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETAIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 256 MIVLAVVALAADYLL 270



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETAIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQL---LFRPMIVW 266
           +  V    D L   L + ++ W
Sbjct: 259 LAVVALAADYLLTWLEKRLLKW 280


>gi|313665371|ref|YP_004047242.1| phosphate ABC transporter, permease protein PstA [Mycoplasma
           leachii PG50]
 gi|312949305|gb|ADR23901.1| phosphate ABC transporter, permease protein PstA [Mycoplasma
           leachii PG50]
          Length = 696

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 84/596 (14%), Positives = 196/596 (32%), Gaps = 75/596 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAM 76
           IF LLA V+++G + I  + +       D V     + D     +      T + +  +M
Sbjct: 35  IFVLLALVILLGFVMIKTNVLFNKQSFFDFVFGKNWSPDSKQFGILTITLMTLILIFISM 94

Query: 77  VISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFT---VVYFMNLYPGKV 131
           +I++  T   +   ++   L    + + I+ ++  IP + F  F    +     L     
Sbjct: 95  LIAVPLTIFTSFFISEYLTLKSQKITITIIKLLAGIPSVVFGLFAREQIGALFKLMGASS 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + A   +    +  M    Y ++ ++P    + S +  +S  +  + +    + P 
Sbjct: 155 NDNLMVASLTMAFMAIPIMISLSYDAIKSVPLIYRDASLALGISKEKTTFNIIRKSATPK 214

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPG------------IGSYIALAIK 234
           ++  +++ MS      +A  MI        DT   + G            IG  +     
Sbjct: 215 IISAVILGMSRVIGETMAIMMIAGNSTAWFDTNNGVSGFLFSSIRTLSSTIGLEMLENSS 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                A+    + +  ++F+ + L+                          L++  K + 
Sbjct: 275 NLHESALYAIGMFLFILVFIINLLI--------------------------LFVSNKNSI 308

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV--V 352
            + I    +           KL +   + +        +L        ML + W  +  V
Sbjct: 309 SQKIHLVLFKNKKTHKIKHIKLYQKQILDQIITNRTENKLFKKIYSIIMLILMWLSISFV 368

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVI---WLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 I + +I   ++   Y +    I         +   ++LI+   +  IP+ +   
Sbjct: 369 IMFTFWIVFITIFNGLSSLKYSEAFLTIEGEDGIFAAILTTLLLILCTLLFSIPLALACA 428

Query: 410 F--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGT 460
                      +++   +    L A+ P+ +F    +S    Y  L  +++ + + +   
Sbjct: 429 IYLSEFANKNSYLAKFFRFLLNLAASTPSIIFGIFGLSVFIIYLKLPFSIFSASITMTIV 488

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG---- 515
              +L  N     ++ P  ++E A +  ++  +    I+LP      +TG I A      
Sbjct: 489 VLPMLIKNFEDALTSVPLSYREAAIALGLSKTKTLFKIVLPNALQAIITGTILAMARIIG 548

Query: 516 -GAWNASIVSEVASWGHIHLRTTGLG-----AYIAESTEKGSFPEVVLGVLIMCCF 565
             A     +     +      ++G         IA  +  G   ++   + ++   
Sbjct: 549 ESAPIYLTLGTAIKYPDKGFLSSGSTLTTGIYKIASESAPGQGNDIAWLMSLITII 604


>gi|89894403|ref|YP_517890.1| hypothetical protein DSY1657 [Desulfitobacterium hafniense Y51]
 gi|89333851|dbj|BAE83446.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 218

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110
           ++ + +    L     +    +  +M+I++        L  + + L   ++ +  I+Q+I
Sbjct: 11  MLQLEMRWPDLIAALVQHIELVFISMLIAITIGVPLGILITRVKALEGPVLGVAGILQTI 70

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  L F +  F              A+ A+F   + ++  + +  + ++ +   E ++
Sbjct: 71  PGLALLGFMIPLFGIGI--------KTAVAALFLYSLLSIIRNTFTGIKDVDKATIEAAK 122

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++ WQ    + +P ++  ++  +  +          +  I  G       G+G +I 
Sbjct: 123 GMGMTDWQILIKVQLPLALSVMMAGIRTATVINVGTATLAAFIGAG-------GLGDFIF 175

Query: 231 LAIKEQDLLAILYAML 246
           + I       +L    
Sbjct: 176 IGISRNLDALVLIGAF 191



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 11/154 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + ++IA  I +P+GI I     +   +   A +L   P       ++           
Sbjct: 32  VFISMLIAITIGVPLGILITRVKALEGPVLGVAGILQTIPGLALLGFMIPLFGIGIKTAV 91

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L L  +      I+ N   G         E A    +T W+    + LP      + G
Sbjct: 92  AALFLYSLLS----IIRNTFTGIKDVDKATIEAAKGMGMTDWQILIKVQLPLALSVMMAG 147

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             TA       + ++     G       GLG +I
Sbjct: 148 IRTATVINVGTATLAAFIGAG-------GLGDFI 174


>gi|268319127|ref|YP_003292783.1| Phosphate ABC transporter, permease protein PstC [Lactobacillus
           johnsonii FI9785]
 gi|262397502|emb|CAX66516.1| Phosphate ABC transporter, permease protein PstC [Lactobacillus
           johnsonii FI9785]
          Length = 330

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 66/154 (42%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A   A       S+     L  +++++  IP + +    LT  V +
Sbjct: 115 FSVTLLAALVATPFAIAVALFMTEYSSKNGARFLQAVIELLVGIPSVVYGFLGLTVIVPF 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 175 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 233

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 234 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 267



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 66/188 (35%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I +          + + 
Sbjct: 87  VFQFLTSSDWDPGEGKNHVGAAAMIVTSFSVTLLAALVATPFAIAVALFMTEYSSKNGAR 146

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+  L ++ +       +      +  + L++F      + +  +
Sbjct: 147 FLQAVIELLVGIPSVVYGFLGLTVIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 207 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 266

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 267 NAVLMPAN 274


>gi|316931550|ref|YP_004106532.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315599264|gb|ADU41799.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 271

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 7/204 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +V     QD   +      T+   +   + A+   I +G+       +   + P+A +L
Sbjct: 51  LLVASTLIQDWPVLFGSLLTTLRTTLEGFVAAAAGGIALGLLFNQSRLLEFSLFPYAVVL 110

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++      +L     + +       + +L N   G ++   +   +   
Sbjct: 111 QVTPVIAIAPLLLI-----YLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRL 165

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
           +  + W+    + LP   PY + G   A G +   ++V+E+A+          L   IAE
Sbjct: 166 YGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAE 223

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           S  + + P +   +L++    + +
Sbjct: 224 SGYRLNIPRMFAALLLLSTAGIVI 247



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR L   L P   ++Q  P++      ++Y         +  E A I   +    + +  
Sbjct: 96  SRLLEFSLFPYAVVLQVTPVIAIAPLLLIY---------LPQETAVIVCAWIVAFFPVLS 146

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    L ++ R+L  + R +  S WQ    L +P ++P ++  + ++        V +E+
Sbjct: 147 NTTLGLNSVDRNLAGLFRLYGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEI 206

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                       +   IA +    ++  +  A+L +     + 
Sbjct: 207 AAGSAGAGSG--LAYRIAESGYRLNIPRMFAALLLLSTAGIVI 247


>gi|300362092|ref|ZP_07058269.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354711|gb|EFJ70582.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 330

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            S  +++ L    +A   A       S++    L  +++++  IP + +    LT  V +
Sbjct: 115 FSVTLLAALVATPFAIAVALFMTEYSSKKGARFLQSVIELLVGIPSVVYGFLGLTIIVPF 174

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  L+A   +F   +  +T     SL  +P D  + S +   + WQ  + 
Sbjct: 175 IRNIFGGTGFGI-LSATLVLFVMVLPTITSLTVDSLKAVPSDYRKASLALGATKWQTIYK 233

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 234 VILRVASPRIMTAVIFGMARAFGEALAVQMVIGN 267



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +                 +     + ++A+++  P  I +            + 
Sbjct: 87  VFQFLTSSDWDPGEGKSHVGAAAMIVTSFSVTLLAALVATPFAIAVALFMTEYSSKKGAR 146

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 147 FLQSVIELLVGIPSVVYGFLGLTIIVPFIRNIFGGTGFGILSATLVLFVMVLPTITSLTV 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+D+++ + +   T W+    +IL    P  +T  I     A+  ++  ++   
Sbjct: 207 DSLKAVPSDYRKASLALGATKWQTIYKVILRVASPRIMTAVIFGMARAFGEALAVQMVIG 266

Query: 530 GHIHLRTT 537
             + +   
Sbjct: 267 NAVLMPAN 274


>gi|251798662|ref|YP_003013393.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546288|gb|ACT03307.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 298

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 101/259 (38%), Gaps = 28/259 (10%)

Query: 22  LLAFVLVIGIINILLHGIQE---------TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
                +  G++ +++  ++            +P        I  +   L  Y+  T   M
Sbjct: 48  TFWLPIGFGLLFLIIWQLKGFHKLFHLELYQLPIPSAIGKAIQTNRDLLWNYSLYTGAEM 107

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +   +I      + A  A+   + G   + ++  + ++PI+        +F +    K+ 
Sbjct: 108 IGGCLIGSAIGLLAAIAASFITQAGKGAITLVAALNAVPIVALAPVMNNWFGDGVASKM- 166

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                AI AI T     M  S Y+ L ++     E+  ++    +  F  L    ++P +
Sbjct: 167 -----AIVAIMTMAT--MAVSAYKGLRSVEPAYLELMHAYAAGRFVIFLKLRFKLALPAI 219

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++M+ G   ++ +   +VG+  I   G+G  ++  IK  ++  I ++ + +  V+
Sbjct: 220 FTALKINMATG---IIGA---IVGEFFISSRGLGFLLSDQIKLGNMP-IAWSCIVIAAVL 272

Query: 253 FL----YDQLLFRPMIVWS 267
            +      QLL R  I W 
Sbjct: 273 GIALYYLIQLLERIAIPWH 291



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L A P     P++ +       +    ++++ +      +  +   G  +    + 
Sbjct: 138 LVAALNAVPIVALAPVMNNWFGDGVASKMAIVAIMTMAT----MAVSAYKGLRSVEPAYL 193

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E+  ++    +  +  +      P   T            +IV E        + + GLG
Sbjct: 194 ELMHAYAAGRFVIFLKLRFKLALPAIFTALKINMATGIIGAIVGEFF------ISSRGLG 247

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +++  + G+ P     ++I     +AL   +
Sbjct: 248 FLLSDQIKLGNMPIAWSCIVIAAVLGIALYYLI 280


>gi|111019582|ref|YP_702554.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110819112|gb|ABG94396.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 251

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 80/210 (38%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I ++++   +     +  L    +    + +  A++I +P+G++IG     +  +   A 
Sbjct: 2   IDFLLDGAHWTGPEGIPALLLQHLMYTFLALFAAALIAVPLGLYIGHTGRGAVVVAGLAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFK 480
            L A P      L+V  ++        +L    ++++      IL N  AG  +      
Sbjct: 62  SLRALPTIGLLILLVLVIAPSFSTKLAYLIPSLIVLVLLAIPPILTNTYAGIRSVDPAAV 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A        R    + +P   P  ++G  +A     + + V+   S G       GLG
Sbjct: 122 DAARGMGFRSMRILTEVEMPCALPLMLSGVRSAVLQIVSTATVAAYISLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +   +  + ++  G +++    LA +
Sbjct: 175 RLLIDGKAQSDYAQMAAGAVLVSLLALAFD 204



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 71/202 (35%), Gaps = 8/202 (3%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P    +  +    A+  + L           + R  +V+  + + ++++P +G L 
Sbjct: 14  PEGIPALLLQHLMYTFLALFAAALIAVPLGLYIGHTGRGAVVVAGLANSLRALPTIGLLI 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+     +  K+     + I  +  + +  +  + Y  + ++     + +R       
Sbjct: 74  LLVLVIAPSFSTKLAYLIPSLIVLVLLA-IPPILTNTYAGIRSVDPAAVDAARGMGFRSM 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P ++P ++  +  ++         +  I +G       G+G  +     + D
Sbjct: 133 RILTEVEMPCALPLMLSGVRSAVLQIVSTATVAAYISLG-------GLGRLLIDGKAQSD 185

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +    + +  +   +D  +
Sbjct: 186 YAQMAAGAVLVSLLALAFDLAI 207


>gi|199597244|ref|ZP_03210675.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|258507902|ref|YP_003170653.1| phosphate ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258539148|ref|YP_003173647.1| phosphate ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|199591760|gb|EDY99835.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|257147829|emb|CAR86802.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257150824|emb|CAR89796.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259649229|dbj|BAI41391.1| phosphate ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 307

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +      + +++  F             +    VL P+++++  IP + +    L+  V 
Sbjct: 89  SFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVYGFIGLSVIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  +
Sbjct: 149 FIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGATRWQTTY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 208 RVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGN 242



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +     +  I+A+   +  GI++           +QP  +LL   P+ V+  +
Sbjct: 82  ALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVYGFI 141

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +S +       +      +     ++F      +    +    A P  ++E + +   T
Sbjct: 142 GLSVIVPFIRHIFGGTGFGILAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+    ++L    P  +TG +     A+  ++  ++       L   
Sbjct: 202 RWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLPKN 249


>gi|115350080|ref|YP_771919.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115280068|gb|ABI85585.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 285

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 256 MIVLAVVALAADYLL 270



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 259 LAVVALAADYLLTWIEKRLLKW 280


>gi|290962478|ref|YP_003493660.1| ABC transporter permease [Streptomyces scabiei 87.22]
 gi|260652004|emb|CBG75136.1| probable ABC transport permease [Streptomyces scabiei 87.22]
          Length = 229

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 70/204 (34%), Gaps = 15/204 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           + +  +  D +           +P            +++ +      +  L   + R   
Sbjct: 5   LNQMRLVGDWLTSSAQWHGDDGIPSRLLEHLTYSGLSLLFAAAIGLTFGLLVGHTGRGAF 64

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            +  + ++ ++IP  G +   V             +    + A+    V  +  + ++ +
Sbjct: 65  AVATVANLARAIPTFGLVVLVVTLAGL--------STAPVLVALTALAVPPILINTFEGV 116

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +     + +R   ++ W+    + VP ++P ++  + ++       VVA+  +     
Sbjct: 117 RGVDPATRDAARGVGMTEWEVLTRVEVPMALPLILLGLRVAAIQ----VVATATVAA--- 169

Query: 219 VIPLPGIGSYIALAIKEQDLLAIL 242
              L G+G YI   +   D   ++
Sbjct: 170 YPGLGGLGRYIVDGLSRNDYELVI 193



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 11/167 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + ++ A+ I +  G+ +G     +  +   A L  A P    F LVV  V+   L+    
Sbjct: 40  LSLLFAAAIGLTFGLLVGHTGRGAFAVATVANLARAIPT---FGLVVLVVTLAGLSTAPV 96

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  L        IL N   G        ++ A    +T W     + +P   P  + G  
Sbjct: 97  LVALTAL-AVPPILINTFEGVRGVDPATRDAARGVGMTEWEVLTRVEVPMALPLILLGLR 155

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            A       + V+     G       GLG YI +   +  +  V+ G
Sbjct: 156 VAAIQVVATATVAAYPGLG-------GLGRYIVDGLSRNDYELVIGG 195


>gi|116494444|ref|YP_806178.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116104594|gb|ABJ69736.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus casei ATCC 334]
          Length = 307

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +      + +I+  F             +    +L P+++++  IP + +    L+  V 
Sbjct: 89  SFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVYGFIGLSVIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  +
Sbjct: 149 FIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGATRWQTTY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 208 RVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGN 242



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 9/168 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +     +  IIA+   +  GI++    R      +QP  +LL   P+ V+  +
Sbjct: 82  ALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVYGFI 141

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +S +       +      +     ++F      +    +    A P  ++E + +   T
Sbjct: 142 GLSVIVPFIRHIFGGTGFGILAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+    ++L    P  +TG +     A+  ++  ++       L   
Sbjct: 202 RWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLPKN 249


>gi|253734131|ref|ZP_04868296.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253727826|gb|EES96555.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 231

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L     +  L  +  ++ + L       L A+  +L   ++ I +I+Q++P++  
Sbjct: 15  TNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 +  +F   +  +  + Y  + ++  ++++  +   ++
Sbjct: 75  LAILMLVMGLG--------SETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSM 200
             Q    + +P S+  ++  + +++
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    +   V  ++ A++I IP+GI +     +S  +   A ++   P
Sbjct: 11  NYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVP 70

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++  +       +  + L +       I+ N   G ++   + K+      +T
Sbjct: 71  VIAMLAILMLVMGLG----SETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
             +  R I LP      + G   A 
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151


>gi|325927457|ref|ZP_08188701.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas perforans 91-118]
 gi|325542158|gb|EGD13656.1| periplasmic glycine betaine/choline-binding lipoprotein
           [Xanthomonas perforans 91-118]
          Length = 406

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 11/157 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            + L    E  V    + + P +     +  L ++       +  ++ ++LL       L
Sbjct: 258 QVKLERQSEAAVAARWLGVTPASETDSRLTRLLRHTREHLALVGISLGLALLLALPLGVL 317

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA+  RLG V++ +  ++Q++P L    F +  F              AI A+F   +  
Sbjct: 318 AARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLP 369

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +  + +  L +IPR+L + + +  L  W + W + +P
Sbjct: 370 IVRNTHAGLTSIPRELRQTAHAIGLPAWTRLWRVELP 406



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            RP +   +     +L   P+   F  ++         P +    L    +   I+ N  
Sbjct: 320 RRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIG-AKPAIAALFLY---SLLPIVRNTH 375

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           AG ++ P + ++ A +  +  W     + LP
Sbjct: 376 AGLTSIPRELRQTAHAIGLPAWTRLWRVELP 406


>gi|227513671|ref|ZP_03943720.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227083187|gb|EEI18499.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
          Length = 275

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 22/224 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP     + L  + A VIS  F    A        +R   +L P+ +++  IP + +
Sbjct: 48  VGALP-MILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKILQPVTELLVGIPSVVY 106

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V +  N++ G   G  L+  F +F   +  +      SL ++P    + S +
Sbjct: 107 GFIGLSVVVPFVRNVFGGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLA 165

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-------------- 217
              + WQ  W + +  + PG++  ++  M+  +   +A +M++                 
Sbjct: 166 LGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVIGNASLMPHNLISPASTL 225

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           T +   G+G+ +  +++   L ++   +L M  +  L    + R
Sbjct: 226 TSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIGR 269



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 33/241 (13%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKI 418
           G + N  T     +        +    ++ I+A++I  P  I              +  +
Sbjct: 32  GTLWNPGTKTPDGHAAVGALPMILGSFLVTILAAVISTPFAIGTAVYMTEISPKRGAKIL 91

Query: 419 QPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNV 468
           QP  +LL   P+ V+         P V +      + +    ++  +MI  T   I+   
Sbjct: 92  QPVTELLVGIPSVVYGFIGLSVVVPFVRNVFGGSGFGILSGTFVLFVMILPT---IVSMT 148

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +    + P  +++ + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 149 VDSLKSVPTYYRQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALAVQMVI 208

Query: 529 WGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                              + T G+G  +  S +  +   + L +L+M      L  F+ 
Sbjct: 209 GNASLMPHNLISPASTLTSVLTAGMGNTVMGSMQNDALWSLALVLLVMSLLFNLLVHFIG 268

Query: 575 H 575
            
Sbjct: 269 R 269


>gi|159043922|ref|YP_001532716.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911682|gb|ABV93115.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 303

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 71/200 (35%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              ++D +     G ++         + ++    V I +     +   + P    +AA P
Sbjct: 98  PILWEDFVQTFVKGALS------GYAMGAVAAFAVAILVDRYDFLRRGLLPVGNFMAALP 151

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F     IL N + G  +     +++  ++  T
Sbjct: 152 IIGTAPILVMWFGFDWESKAAVVVVMVFF----PILVNTVEGLRSADRMQRDLMETYAAT 207

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+   Y+ LP   P+   G   A   A   +IV+E            G+G  I+ S  +
Sbjct: 208 NWQSLLYLRLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVGQ 262

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
            +   V   + +      A 
Sbjct: 263 LALDMVWAQITVAALAGSAF 282



 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 111/268 (41%), Gaps = 21/268 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
              +R + P IF +   +LV+  + + L+ +    +P   V  V I   +  L +   +T
Sbjct: 50  SPTARTLVPVIFGVT--ILVLWEVTVRLYAVPGVILPPPSVIGVRIANSLPILWEDFVQT 107

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  LS   +  +  F  A L  +   L   L+P+ + M ++PI+G     V++F   +
Sbjct: 108 FVKGALSGYAMGAVAAFAVAILVDRYDFLRRGLLPVGNFMAALPIIGTAPILVMWFGFDW 167

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F         +  +  + L +  R   ++  ++  + WQ   YL +P 
Sbjct: 168 ESKAAVVVVMVFF--------PILVNTVEGLRSADRMQRDLMETYAATNWQSLLYLRLPA 219

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   + ++ +      + +E         P+ G+G  I+ ++ +  L  +++A +T
Sbjct: 220 AMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVGQLALD-MVWAQIT 273

Query: 248 MLGVI----FLYDQLLFRPMIVWSNKFR 271
           +  +     +    L+ R +  W    R
Sbjct: 274 VAALAGSAFYGAVALIERRVTFWHPSVR 301


>gi|229013978|ref|ZP_04171102.1| ABC transporter permease protein [Bacillus mycoides DSM 2048]
 gi|228747234|gb|EEL97113.1| ABC transporter permease protein [Bacillus mycoides DSM 2048]
          Length = 167

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 12/142 (8%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIA 470
           P ++  + P+  +L A P     P+++         PN+  S+ M +  +    +  + +
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYS 56

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                 +++ +V  +F    W+ ++++ILP  FP  ++      G +W   I  E+    
Sbjct: 57  AFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVIFGELL--- 113

Query: 531 HIHLRTTGLGAYIAESTEKGSF 552
              +   GLG  I+   +  +F
Sbjct: 114 ---VSKQGLGYLISYGFQVFNF 132



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 14/145 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L  VL P L ++ ++P +      +V F       +    + +I              
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV-------- 53

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +Y +   +  +  +V  +F  + WQ + ++ +P S P ++  + +++   W  V+  E++
Sbjct: 54  IYSAFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVIFGELL 113

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDL 238
           V         G+G  I+   +  + 
Sbjct: 114 V------SKQGLGYLISYGFQVFNF 132


>gi|229163786|ref|ZP_04291730.1| ABC transporter permease protein [Bacillus cereus R309803]
 gi|228619679|gb|EEK76561.1| ABC transporter permease protein [Bacillus cereus R309803]
          Length = 191

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 69/162 (42%), Gaps = 12/162 (7%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +  I+ +++   +  ++ + P ++  + P+  +L A P     P+++         PN+ 
Sbjct: 6   IGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNIS 60

Query: 452 LSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            S+ M +  +    +  + +      +++ +V  +F    W+ ++ +ILP  FP  ++  
Sbjct: 61  SSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVILPSSFPAIISTL 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 121 KVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 156



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 71/191 (37%), Gaps = 14/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L      ++  +   + AT       L  VL P L ++ ++P +      +V F     
Sbjct: 1   MLETGIGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNIS 60

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    + +I              +Y +   +  +  +V  +F  + WQ +  + +P S
Sbjct: 61  SSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQCYKQVILPSS 112

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  + +++   W  V+  E++V         G+G  I+   +  +   +L ++L  
Sbjct: 113 FPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLVLLSVLLT 166

Query: 249 LGVIFLYDQLL 259
             +  L    +
Sbjct: 167 CVLATLMYVFV 177


>gi|85707411|ref|ZP_01038492.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius sp. 217]
 gi|85668067|gb|EAQ22947.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius sp. 217]
          Length = 291

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 9/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL  ++  T        V+        A     +R + M ++P +   Q+IPIL 
Sbjct: 82  GFSKRSLFYHSWITFSATALGFVLGTALGIALAIGIVYNRTIDMSVMPWVIASQTIPILA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +V    +    ++   + +++  F    + +   M + L +      +  R++  
Sbjct: 142 IAPMIIVVLNAVGISGLLPKAMISMYLSF----FPVVVGMVKGLRSPAPMQLDQMRTWSA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q FW L +P SMP L  ++ + M+      +  E+         + G+G+ +     
Sbjct: 198 SAAQTFWRLRLPSSMPYLFTSLKVGMAASLVGAIVGEL-----PTGAVAGLGARLLAGSY 252

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
               + I  A++    +  +   L+
Sbjct: 253 YGQTIQIWSALIMAATLAAVLVGLI 277



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 82/219 (37%), Gaps = 8/219 (3%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W + G +V          + +   IT     +  ++ + + I + I I +   I   + 
Sbjct: 69  IWNTTGAMVLEGRGFSKRSLFYHSWITFSATALGFVLGTALGIALAIGIVYNRTIDMSVM 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+       P     P+++  ++   ++  L  +++ ++ + + ++  ++ G  +     
Sbjct: 129 PWVIASQTIPILAIAPMIIVVLNAVGISGLLPKAMISMYLSFFPVVVGMVKGLRSPAPMQ 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   ++  +  + +  + LP   PY  T        +   +IV E+ +         GL
Sbjct: 189 LDQMRTWSASAAQTFWRLRLPSSMPYLFTSLKVGMAASLVGAIVGELPTGA-----VAGL 243

Query: 540 GAYIAESTEKGSFPEVVLGVLI---MCCFVLALNRFLWH 575
           GA +   +  G   ++   +++   +   ++ L   +  
Sbjct: 244 GARLLAGSYYGQTIQIWSALIMAATLAAVLVGLIGLVQR 282


>gi|317011035|gb|ADU84782.1| osmoprotection protein [Helicobacter pylori SouthAfrica7]
          Length = 551

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 77/232 (33%), Gaps = 12/232 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +++      +   VA+ +    + Y++  F +   +Y + L       V +  +I  +  
Sbjct: 17  WLIHSVDVAIQHLVAMALKISVVKYLIKEF-HDRFIYFVDLISQHFIIVSLSSLIVLVFG 75

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           + +G+++ +     + + P    L   P+   F L +  +     N  L L L  +    
Sbjct: 76  VLIGVFVFYNSRAKAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL--- 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ +          +  + A          +  +      P  + G   A        
Sbjct: 133 -PIVHSTYNALKEGREEVIKAAIGLGCNQKELFFRVRFLLAIPQILVGLRIA------VV 185

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           ++  +A  G +        A I       +   +V G  I+  F +  ++F+
Sbjct: 186 MLVAMAGIGALIGAGGLGQA-IFRGLNTQNTTLLVAGSFIIAVFSVLADQFV 236



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  + +I L+F  +       + R    L+P+++ + +IP L      +           
Sbjct: 64  VSLSSLIVLVFGVLIGVFVFYNSRAKAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEGREEVIKAAIGLGCNQKELFFRVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIAVF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|116249416|ref|YP_765257.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254066|emb|CAK12463.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 211

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  + ++ I+ +         A++ R    +V I   ++SIP L  L+  + +    
Sbjct: 23  RHLLMCVLSLGIAFVIAVPLGFAVARAPRAAFAVVNIAGALRSIPSLAILSAAMPFLGIG 82

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                    L ++ A+    V  +  S    +  I   + + +    +S  Q  W + +P
Sbjct: 83  L--------LPSVVALIVLAVPPLLLSTIIGIREIDASVIDAADGMGMSAGQMLWEIELP 134

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  +  S          +  I  G       G+G +I   I   ++  +L   +
Sbjct: 135 LAVPSILSGVRTSAIQVIGGAALASFIGGG-------GLGDFINAGIAIMNMPRLLVGAV 187

Query: 247 TMLGVIF 253
            +  +  
Sbjct: 188 PIALLAI 194



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 11/177 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ + IA +I +P+G  +   P  +  +   A  L + P+       +  +    L   +
Sbjct: 29  VLSLGIAFVIAVPLGFAVARAPRAAFAVVNIAGALRSIPSLAILSAAMPFLGIGLLPSVV 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L + I G         + A    ++  +    I LP   P  ++G 
Sbjct: 89  ALIVL----AVPPLLLSTIIGIREIDASVIDAADGMGMSAGQMLWEIELPLAVPSILSGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            T+       + ++     G       GLG +I       + P +++G + +    +
Sbjct: 145 RTSAIQVIGGAALASFIGGG-------GLGDFINAGIAIMNMPRLLVGAVPIALLAI 194


>gi|237712167|ref|ZP_04542648.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453488|gb|EEO59209.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 395

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|210632881|ref|ZP_03297580.1| hypothetical protein COLSTE_01487 [Collinsella stercoris DSM 13279]
 gi|210159349|gb|EEA90320.1| hypothetical protein COLSTE_01487 [Collinsella stercoris DSM 13279]
          Length = 210

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L +        + + M IS +          +  RL   +V +L  + SIP +      
Sbjct: 13  QLIEATLEHLALLGATMGISCVLAGFVTLACLRRERLADAVVELLGAVYSIPSIAL---- 68

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              F  L P   +G+  A +  +  +Q   +  +  + L  +  DL E +R    S  Q 
Sbjct: 69  ---FALLIPLTGLGSTSAVLVMVVYNQFM-LVRNALEGLRGVDADLIEAARGMGFSERQV 124

Query: 180 FWYLGVPFSMPGLVWNMMM-SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              + +P ++P ++  + + S+S      +A+         I   G+G+ +   ++  ++
Sbjct: 125 LLDVRLPLALPAIIAGVRLASISTVGIATIAA--------TINAGGMGAILLSGLRSMNM 176

Query: 239 LAILYAMLTMLGVIFLYDQL 258
             IL   L    +    D L
Sbjct: 177 DKILAGTLCSAAIALACDAL 196



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 64/186 (34%), Gaps = 11/186 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   + I+ ++   V +    R  ++  +      + + P+   F L++        
Sbjct: 22  LALLGATMGISCVLAGFVTLACLRRERLADAVVELLGAVYSIPSIALFALLIPLTGLGST 81

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      L+M+   Q+ ++ N + G      D  E A     +  +    + LP   P  
Sbjct: 82  S----AVLVMVVYNQFMLVRNALEGLRGVDADLIEAARGMGFSERQVLLDVRLPLALPAI 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A       SI +   +     +   G+GA +       +  +++ G L      
Sbjct: 138 IAGVRLA-------SISTVGIATIAATINAGGMGAILLSGLRSMNMDKILAGTLCSAAIA 190

Query: 567 LALNRF 572
           LA +  
Sbjct: 191 LACDAL 196


>gi|78064693|ref|YP_367462.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
 gi|77965438|gb|ABB06818.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Burkholderia sp. 383]
          Length = 285

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 256 MIVLAVVALAADYLL 270



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYDQL---LFRPMIVW 266
           +  V    D L   L + ++ W
Sbjct: 259 LAVVALAADYLLTWLEKRLLKW 280


>gi|300767567|ref|ZP_07077477.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300494552|gb|EFK29710.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 309

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 92/223 (41%), Gaps = 20/223 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF- 115
           V +LP       + +LSA + +               RR   +L P+ +++  IP + + 
Sbjct: 80  VGALPMIVGSFLITILSAFIATPFAIGTAVFMTEISPRRGAKILRPVTELLVGIPSVVYG 139

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   V +  N + G   G  L+  F +F   +  +T     +L ++PR   E S + 
Sbjct: 140 FIGLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPTVTSMTADALNSVPRYYREASLAL 198

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------T 218
             + WQ  + + +  ++PG++  ++  M+  +   +A +M++                 T
Sbjct: 199 GATRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLPHNLVSPAATLT 258

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            I   GIG+ +  +++   L ++   +L M  V  L  + + R
Sbjct: 259 SILTMGIGNTVMGSLQNNALWSLAMILLLMSLVFNLVIRYIGR 301



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 74/220 (33%), Gaps = 23/220 (10%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +    ++   IA+   I   +++        +  ++P  +LL   P+ V+  +
Sbjct: 82  ALPMIVGSFLITILSAFIATPFAIGTAVFMTEISPRRGAKILRPVTELLVGIPSVVYGFI 141

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +  V       +      +     ++F      +        ++ P  ++E + +   T
Sbjct: 142 GLQVVVPFVRNTFGGSGYGILSGTFVLFVMILPTVTSMTADALNSVPRYYREASLALGAT 201

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT------------ 537
            W+    ++L    P  +T  +     A+  ++  ++       L               
Sbjct: 202 RWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLPHNLVSPAATLTSIL 261

Query: 538 --GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             G+G  +  S +  +   + + +L+M      + R++  
Sbjct: 262 TMGIGNTVMGSLQNNALWSLAMILLLMSLVFNLVIRYIGR 301


>gi|159043047|ref|YP_001531841.1| sulfonate/nitrate/taurine transport system permease
           [Dinoroseobacter shibae DFL 12]
 gi|157910807|gb|ABV92240.1| sulfonate/nitrate/taurine transport system permease protein
           [Dinoroseobacter shibae DFL 12]
          Length = 274

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 91/236 (38%), Gaps = 14/236 (5%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
            +G    T P D +  V       +  + A+ T  R +S   +           A     
Sbjct: 43  AYGPFILTSPLDTMQTVASLAGDPAAWKIAALTLQRAVSGFFLVAAVGTALGVAAGYFPA 102

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  ++ P++ ++  +P + ++   +++F         G++      I  S +  +     
Sbjct: 103 VLRLVTPLVTVLLGVPPIAWIVLAMIWFG--------GSDATVRTVILISALPVVFMGAA 154

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +    R L+ ++  F     ++F  +G+  +   L   + +++   +   V +E++  
Sbjct: 155 RGITTRDRLLDRMASVFGAGPVRRFMTIGLRQTTTTLFPALALALGTAFKVAVMAELLAN 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                   GIG  +A A    D+   L  +L  + ++ + +  L +P+    +++R
Sbjct: 215 AG------GIGGALADARINLDIGLALAWVLIAVALLIVVEYTLVQPVKAEIDRWR 264



 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 79/262 (30%), Gaps = 12/262 (4%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L  +L               +      +L   W          I    +  +    +   
Sbjct: 5   LLISLVTRVGRVGAFLWSGWAGLAALALLFAVWQAGHEAYGPFILTSPLDTMQTVASLAG 64

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
                 +  +T+ R V    + + +   +G+  G+ P +   + P   +L   P   +  
Sbjct: 65  DPAAWKIAALTLQRAVSGFFLVAAVGTALGVAAGYFPAVLRLVTPLVTVLLGVPPIAWIV 124

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           L +                 +I  +   ++F   A G +        +AS F     R +
Sbjct: 125 LAMIWFGGSDATVRT-----VILISALPVVFMGAARGITTRDRLLDRMASVFGAGPVRRF 179

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I L             A G A+  ++++E+ +         G+G  +A++        
Sbjct: 180 MTIGLRQTTTTLFPALALALGTAFKVAVMAELLA------NAGGIGGALADARINLDIGL 233

Query: 555 VVLGVLIMCCFVLALNRFLWHP 576
            +  VLI    ++ +   L  P
Sbjct: 234 ALAWVLIAVALLIVVEYTLVQP 255


>gi|86358895|ref|YP_470787.1| nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli
           CFN 42]
 gi|86282997|gb|ABC92060.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 375

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 67/180 (37%), Gaps = 9/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++  +I  +    V +       +   + P   +++A P     P++V    +   +  
Sbjct: 184 VLIGYVIGCLSGFVVAVLADRVSFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWQSK- 242

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N +AG +A  +  +++  ++  + W+    + LP   P+    
Sbjct: 243 ---AAVVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLFKLKLPAAMPFIFNA 299

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E      +     G+G  I+    + +   V   + +        
Sbjct: 300 LKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEIGRMNVDMVWAEIAVAALAGSIF 354



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 17/238 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF     +L   I             P  I   +  +L +  L     +T  + +L
Sbjct: 128 LIPAIFGAWILILWEAITRGAGISFIILPPPSAIGARIMTSLPI--LGADVRQTIFKAVL 185

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              VI  L  FV A LA +   L   L+PI +++ ++PI+G     V++F   +  K   
Sbjct: 186 IGYVIGCLSGFVVAVLADRVSFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWQSKAA- 244

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   +     + M  +    L        ++ R++  S WQ  + L +P +MP + 
Sbjct: 245 -------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLFKLKLPAAMPFIF 297

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + ++ +      + +E         P+ G+G  I+  I   ++  +++A + +  +
Sbjct: 298 NALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVD-MVWAEIAVAAL 349


>gi|83943285|ref|ZP_00955745.1| putative choline uptake ABC transporter permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846293|gb|EAP84170.1| putative choline uptake ABC transporter permease protein
           [Sulfitobacter sp. EE-36]
          Length = 390

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A +L   +  + +        P  ++       D  +    A+R       ++ ++ L  
Sbjct: 141 ALLLTAVLGALSVVLGSGALAPLSVMQEFAARRDAFA--SEATRHLWLAFGSLGMAGLIG 198

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFMNLYPGKVIGAELA--- 137
           F    L+     L   ++P+L  +Q+IP L         + +     PG           
Sbjct: 199 FPIGVLSHHKPALRSAILPVLSFLQTIPSLAMFGLMIPLLGWVGATVPGARSIGIAGIGF 258

Query: 138 --AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A  A+    +  +  +    L   P      +R   ++  Q+ W + +P  +P ++  
Sbjct: 259 APAFVALVLYSLLPVVGNTVAGLAATPPQALNAARGIGMTAAQRLWRVELPIGLPVILTG 318

Query: 196 MMM 198
           + +
Sbjct: 319 LRI 321



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + +A +I  P+G+    +P + S I P    L   P+   F L++  + +   
Sbjct: 184 LWLAFGSLGMAGLIGFPIGVLSHHKPALRSAILPVLSFLQTIPSLAMFGLMIPLLGWVGA 243

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 S+             ++  +   ++ N +AG +A P      A    +T  +  
Sbjct: 244 TVPGARSIGIAGIGFAPAFVALVLYSLLPVVGNTVAGLAATPPQALNAARGIGMTAAQRL 303

Query: 495 RYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             + LP   P  +TG           A I   +   G       GL     +    G+ P
Sbjct: 304 WRVELPIGLPVILTGLRIVLVQNIGLAVIAGLIGGGGFGTFVFQGLNQTATDLILLGALP 363

Query: 554 EVVLGV---LIMCCFVLALNRF 572
            V L +   ++M   V    R 
Sbjct: 364 TVALALTAAIVMDILVDLTRRL 385


>gi|254504612|ref|ZP_05116763.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222440683|gb|EEE47362.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 256

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 14/182 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +AS T    L   V  +    + A L          ++P + + Q++P+       V
Sbjct: 58  LLHHASITFSETLLGFVFGVAAGCLLAILIWVFPVAKRAIMPTILVTQALPVFAIAPILV 117

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   FA+ ++         Y  L  +   L ++SR +R+S  ++ 
Sbjct: 118 LWLGFGLASKIVMAVLVIFFAVTST--------FYDGLRRLDPGLSDLSRLYRVSRLKEL 169

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W   +P +MP L   + ++       V A    +VG+ V    G+   +  +        
Sbjct: 170 WVFRLPSAMPALASGLRIA------AVFAPIGAIVGEWVGAKGGLAFIMLQSNARMQTDV 223

Query: 241 IL 242
           + 
Sbjct: 224 MF 225



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 57/180 (31%), Gaps = 10/180 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           L+++    IT    ++  +        + I I   P     I P   +  A P     P+
Sbjct: 56  LFLLHHASITFSETLLGFVFGVAAGCLLAILIWVFPVAKRAIMPTILVTQALPVFAIAPI 115

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  + +   +  +   L++ F     +      G         +++  + ++  +    
Sbjct: 116 LVLWLGFGLASKIVMAVLVIFFA----VTSTFYDGLRRLDPGLSDLSRLYRVSRLKELWV 171

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             LP   P   +G   A   A   +IV E            GL   + +S  +     + 
Sbjct: 172 FRLPSAMPALASGLRIAAVFAPIGAIVGEWVG------AKGGLAFIMLQSNARMQTDVMF 225


>gi|213420675|ref|ZP_03353741.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 183

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 61/144 (42%), Gaps = 3/144 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ+  ++ +P ++P +   +  ++
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAV 150



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 1/159 (0%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           T W+  R++ +P   P    G  TA         ++ V 
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVI 163


>gi|312195129|ref|YP_004015190.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
 gi|311226465|gb|ADP79320.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 292

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+   V   +I ++  + +G+ +G    ++  + P+ +++ A P  V   + +     
Sbjct: 92  ATTLKEAVFGFVIGALAGVVLGVSLGQNHFLADVLGPYIKVVNAIPRIVLGSIFIVAFGV 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L  ++L+ F       FN   G                 +  +  R++ LP   
Sbjct: 152 GTTPKVLLAAVLVFFVVF----FNAFQGVREVDRTILSNVRVLGASTLQIVRHVTLPSAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            + +    TA G A   ++V EV           G+G  I  S        V  G+L++ 
Sbjct: 208 TWIIASLHTAFGFAIVGALVGEVLG------AQHGVGLVIRTSQGNLDPNGVFAGMLVVA 261

Query: 564 CFVLALNRFL 573
              L     +
Sbjct: 262 VITLVAEYLI 271



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           R  +D+     +  S     + T    +   VI  L   V      ++  L  VL P + 
Sbjct: 72  RRTLDLFEHGTEFGSFWTDIATTLKEAVFGFVIGALAGVVLGVSLGQNHFLADVLGPYIK 131

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++ +IP +   +  +V F      KV+ A +   F +F +          Q +  + R +
Sbjct: 132 VVNAIPRIVLGSIFIVAFGVGTTPKVLLAAVLVFFVVFFNAF--------QGVREVDRTI 183

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
               R    S  Q   ++ +P ++  ++ ++  +     F +V +   +VG+ +    G+
Sbjct: 184 LSNVRVLGASTLQIVRHVTLPSALTWIIASLHTAFG---FAIVGA---LVGEVLGAQHGV 237

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G  I  +    D   +   ML +  +  + + L+
Sbjct: 238 GLVIRTSQGNLDPNGVFAGMLVVAVITLVAEYLI 271


>gi|265751858|ref|ZP_06087651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236650|gb|EEZ22120.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 395

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKIFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|77463750|ref|YP_353254.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
 gi|77388168|gb|ABA79353.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 311

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     +R +   ++P     Q+IPIL  
Sbjct: 102 TSKRSLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAI 161

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M + L +      ++  ++  S
Sbjct: 162 APMIIVVLNSIGVSGLLPKAVISAYLSF----FPVVVGMVKGLRSPDAMQLDLLSTYNAS 217

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 218 RAQAFWKLRLPASMPYLFASLKVGIAASLVGAIVGEL-----PTGAVAGLGARLLSGSYY 272

Query: 236 QDLLAIL 242
              + I 
Sbjct: 273 GQTIQIW 279



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G IT+   ++   I + + I + + I     +   + P+A      P     P++
Sbjct: 106 SLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAIAPMI 165

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + ++  ++ G  +      ++ S+++ +  + +  +
Sbjct: 166 IVVLNSIGVSGLLPKAVISAYLSFFPVVVGMVKGLRSPDAMQLDLLSTYNASRAQAFWKL 225

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 226 RLPASMPYLFASLKVGIAASLVGAIVGELPTGA-----VAGLGARLLSGSYYGQTIQIW 279


>gi|83944385|ref|ZP_00956839.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sulfitobacter sp. EE-36]
 gi|83844708|gb|EAP82591.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sulfitobacter sp. EE-36]
          Length = 288

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  ++  T    L    +  L   + A     +R 
Sbjct: 59  LPAPHQVASEIWDTTVMKKVTSKRSLVYHSWITLSATLLGFGMGTLLGVLLAVGIVFNRV 118

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M 
Sbjct: 119 MDMSVMPWVIASQTIPILAIAPMIIVVLNAVGVSGLLPKAMISMYLSF----FPVVVGMV 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   +  R++  S  Q FW L +P SMP    ++ ++M+      +  E+   
Sbjct: 175 KGLRSPDQMQLDQMRTWHASAGQTFWKLRLPASMPYFFTSLKIAMAASLVGAIIGEL--- 231

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 232 --PTGAVAGLGARLLAGSYYGQTIQIW 256



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 75/179 (41%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   + +++ + + + I F   +   + P+       P     P++
Sbjct: 83  SLVYHSWITLSATLLGFGMGTLLGVLLAVGIVFNRVMDMSVMPWVIASQTIPILAIAPMI 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++ ++ + + ++  ++ G  +      +   ++H +  + +  +
Sbjct: 143 IVVLNAVGVSGLLPKAMISMYLSFFPVVVGMVKGLRSPDQMQLDQMRTWHASAGQTFWKL 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY+ T    A   +   +I+ E+ +         GLGA +   +  G   ++ 
Sbjct: 203 RLPASMPYFFTSLKIAMAASLVGAIIGELPTGA-----VAGLGARLLAGSYYGQTIQIW 256


>gi|256848544|ref|ZP_05553985.1| phosphate ABC transporter, permease PstC [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256714596|gb|EEU29576.1| phosphate ABC transporter, permease PstC [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 301

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L + +I+L    + A   +    +++  V  PI++++  IP + +    LT  + 
Sbjct: 83  SLLVTLLSGIIALPLALIVAIAMSLILPQQVYKVCQPIVELLVGIPSVVYGYVGLTVVIP 142

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   ++ G   G  LAAI  +F   +  MT     SL  +P+     S     + WQ   
Sbjct: 143 FLQKMFGGTGFGI-LAAIVVLFLMVLPTMTSMTIDSLNAVPKSYRMASAGLGATRWQTIS 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + +P +  G++  M+  M+  +   +A +M++   TVIP
Sbjct: 202 RIILPSAKGGILTAMIFGMARAFGEALAVQMVIGNTTVIP 241



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF--------FP 435
            +T+   ++ + +A I+ I + +       +    QP  +LL   P+ V+         P
Sbjct: 85  LVTLLSGIIALPLALIVAIAMSLI--LPQQVYKVCQPIVELLVGIPSVVYGYVGLTVVIP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            +            L   +++       +    I   +A P  ++  ++    T W+   
Sbjct: 143 FLQKMFGGTGFG-ILAAIVVLFLMVLPTMTSMTIDSLNAVPKSYRMASAGLGATRWQTIS 201

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            IILP      +T  I     A+  ++  ++   G+  +   GL
Sbjct: 202 RIILPSAKGGILTAMIFGMARAFGEALAVQMV-IGNTTVIPHGL 244


>gi|229551749|ref|ZP_04440474.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229314880|gb|EEN80853.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 308

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +      + +++  F             +    VL P+++++  IP + +    L+  V 
Sbjct: 90  SFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVYGFIGLSVIVP 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  +
Sbjct: 150 FIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGATRWQTTY 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 209 RVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGN 243



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   +     +  I+A+   +  GI++           +QP  +LL   P+ V+  +
Sbjct: 83  ALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVYGFI 142

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
            +S +       +      +     ++F      +    +    A P  ++E + +   T
Sbjct: 143 GLSVIVPFIRHIFGGTGFGILAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLALGAT 202

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+    ++L    P  +TG +     A+  ++  ++       L   
Sbjct: 203 RWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLPKN 250


>gi|260430316|ref|ZP_05784290.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260418788|gb|EEX12044.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 531

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 70/495 (14%), Positives = 148/495 (29%), Gaps = 55/495 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R   A + S +  FV+  LA     L +VL+P  + + S   L      +V    +  
Sbjct: 64  LWRAFGATLASAVQGFVWGNLAGVLLALLVVLLPRGERLLSTLALLVFCLPLVATGPILR 123

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                     +     +  +     +   L   P+   ++ RS+          + +P +
Sbjct: 124 VLYGPGTGPQVTLAALAVYYTTFLPVLVGLRAAPQGWFDLVRSYGRGRMTALREVRLPAA 183

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P LV  + ++    +         +VG+      G+G     A++  DL A     +  
Sbjct: 184 LPYLVAGLQIAAPAAFL------GAMVGEFTGAERGLGVLTVRALRALDLPATWAIAVIA 237

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
            GV  L           ++    L R   + P +  +     ++         +    + 
Sbjct: 238 AGVSML----------AFAAVGALGRRLDLAPPEVLMAPPVARSRRPWEAPAQALLALAA 287

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
                K      G+ RF                   D++ + V    A     +    + 
Sbjct: 288 ALLIWKGSMEVFGLPRFF-------------AKRPEDVWLYLVTGPGAEAQRARLFAALG 334

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                    Y+  LG      +++ +                   +   + P +  L + 
Sbjct: 335 ETLALAGPGYLAGLGLGAGLALLLALAPR----------------LGGAVIPLSIALRSI 378

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL+V  +          +++++ F      L     G +  P    ++   +  
Sbjct: 379 PIIATAPLIVWALGRGAAGTITVVAVMIFF----PTLIACQHGLARTPRAVLDLFEVYAS 434

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  R      LP + P +   A  A   A  A   +E  + G       G+GA +A    
Sbjct: 435 SPLRRLLGAQLPAMLPAFFASARMAIPAAILAVTTAEWLATG------RGVGALMATVAS 488

Query: 549 KGSFPEVVLGVLIMC 563
              +  +   + ++ 
Sbjct: 489 TSDYGMLWSAIALVG 503



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P     +   A L+   P     P++               +L + + T   +L     G
Sbjct: 97  PRGERLLSTLALLVFCLPLVATGPILRVLYGPGTGPQVTLAALAVYYTTFLPVL----VG 152

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P  + ++  S+        R + LP   PY V G   A   A+  ++V E      
Sbjct: 153 LRAAPQGWFDLVRSYGRGRMTALREVRLPAALPYLVAGLQIAAPAAFLGAMVGEF----- 207

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 GLG     +      P     + ++   V  L
Sbjct: 208 -TGAERGLGVLTVRALRALDLPAT-WAIAVIAAGVSML 243


>gi|222081904|ref|YP_002541269.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726583|gb|ACM29672.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 211

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I IP+G  +   P  +      A  L + P+       +  +    L   +
Sbjct: 29  AISLGIALVIAIPLGFLVARIPRAAFVAVNIAGSLRSIPSLAILSAAMPFLGIGLLPSVI 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G         + AS   +        I  P   P  + G 
Sbjct: 89  ALVVL----AVPPLLLNTIVGIREIDPALLDAASGMGMGRRDILWQIEAPLSVPSILAGV 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            T+       + ++     G       GLG +I       + P +++G L +    + 
Sbjct: 145 RTSAIQVIGGAALASFIGGG-------GLGDFINAGIAIMNMPRLLVGALPIALLAIL 195



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +  +     +R  L    ++ I+L+       L A+  R   V V I   ++SIP L
Sbjct: 10  IASNPGTFFSAFNRHMLMCAISLGIALVIAIPLGFLVARIPRAAFVAVNIAGSLRSIPSL 69

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L+  + +             L ++ A+    V  +  +    +  I   L + +    
Sbjct: 70  AILSAAMPFLGIGL--------LPSVIALVVLAVPPLLLNTIVGIREIDPALLDAASGMG 121

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +      W +  P S+P ++  +  S          +  I  G       G+G +I   I
Sbjct: 122 MGRRDILWQIEAPLSVPSILAGVRTSAIQVIGGAALASFIGGG-------GLGDFINAGI 174

Query: 234 KEQDLLAILYAMLTMLGVIFL 254
              ++  +L   L +  +  L
Sbjct: 175 AIMNMPRLLVGALPIALLAIL 195


>gi|254477107|ref|ZP_05090493.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
 gi|214031350|gb|EEB72185.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
          Length = 305

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     S+ + M ++P   + Q+IPI+  
Sbjct: 96  TSKRSLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSKVMDMSVMPWAIVSQTIPIIAL 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M + L +      ++ +++  S
Sbjct: 156 APMIIVVLYSIGVQGLLPKAIISAYLSF----FPVVVGMVKGLRSPDHMQLDLLKTYNAS 211

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 212 TAQGFWKLRLPSSMPYLFASLKIGIAASLVGAIVGEL-----PTGAVAGLGARLLAGSYY 266

Query: 236 QDLLAIL 242
              + I 
Sbjct: 267 GQTVQIW 273



 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++   I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSKVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   L  +++  + + + ++  ++ G  +  +   ++  +++ +  + +  +
Sbjct: 160 IVVLYSIGVQGLLPKAIISAYLSFFPVVVGMVKGLRSPDHMQLDLLKTYNASTAQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|153007689|ref|YP_001368904.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559577|gb|ABS13075.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 286

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 94/249 (37%), Gaps = 17/249 (6%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTFV 85
           L++  + + L  I +  +P        IT  V  L     +T L+ ++   V      F+
Sbjct: 49  LLLWEVTVRLFAIPQVLLPAPSAIWARITASVPILWADFRQTFLKAVIIGYVAGCGLGFI 108

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A +A +   L   L+P+ ++  ++PI+G     V++F   +  K           +   
Sbjct: 109 TAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQSKAA--------VVIIM 160

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + M  +    L +      ++  ++  S WQ  + L +P +MP +   + ++ +    
Sbjct: 161 TFFPMLVNTVAGLASTGAMERDMMETYGSSYWQTLFKLRLPAAMPFIFNALKINSTLALI 220

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRP 262
             + +E         P+ G+G  I+  I   ++  +   +        L      L+ R 
Sbjct: 221 GAIVAEFFGT-----PIVGMGFRISAEIGRMNVDMVWAEIFVAALAGSLSYGLIALIERR 275

Query: 263 MIVWSNKFR 271
           M  W   +R
Sbjct: 276 MTFWHPSYR 284



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 65/182 (35%), Gaps = 9/182 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V++  +    +     I     P +   + P   L AA P     P++V    +   
Sbjct: 92  LKAVIIGYVAGCGLGFITAIIADRIPFLRKGLLPLGNLAAALPIVGVAPIMVMWFGFDWQ 151

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + ++I  T + +L N +AG ++     +++  ++  + W+    + LP   P+ 
Sbjct: 152 SK----AAVVIIMTFFPMLVNTVAGLASTGAMERDMMETYGSSYWQTLFKLRLPAAMPFI 207

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   + +     
Sbjct: 208 FNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISAEIGRMNVDMVWAEIFVAALAG 262

Query: 567 LA 568
             
Sbjct: 263 SL 264


>gi|150006420|ref|YP_001301164.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|294777060|ref|ZP_06742518.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           vulgatus PC510]
 gi|149934844|gb|ABR41542.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|294449118|gb|EFG17660.1| phosphate ABC transporter, permease protein PstC [Bacteroides
           vulgatus PC510]
          Length = 395

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|170690686|ref|ZP_02881852.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143935|gb|EDT12097.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 287

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q + + VN  +   +L  +W   +T+    +  II S+  I  GI +G    +S     +
Sbjct: 74  QIVDWFVNGTSQGPLLTQVW---VTLEETGLGFIIGSVAGIFCGIVLGRNKLLSDVFSLY 130

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            ++  + P  V   + V  +     +      +++ F        N   G          
Sbjct: 131 IKIANSIPRVVLGSVFVIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIA 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     +  +    +++P    + +     + G A   ++V E            G+G 
Sbjct: 187 NAQILGASRRQVTTSVVIPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGL 240

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I+ +    +   V   ++++    LA +  L
Sbjct: 241 LISTAQGAFNASGVFAAMIVLAVVALAADYLL 272



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGIFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 261 LAVVALAADYLLTAVEQRLLKW 282


>gi|153815637|ref|ZP_01968305.1| hypothetical protein RUMTOR_01873 [Ruminococcus torques ATCC 27756]
 gi|317502426|ref|ZP_07960590.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090312|ref|ZP_08339196.1| hypothetical protein HMPREF1025_02779 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847068|gb|EDK23986.1| hypothetical protein RUMTOR_01873 [Ruminococcus torques ATCC 27756]
 gi|316896164|gb|EFV18271.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401447|gb|EGG81032.1| hypothetical protein HMPREF1025_02779 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 265

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 75/196 (38%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     IT++   +  I+  ++ I   I + +   +S  ++P+  +L + P +   PL+
Sbjct: 69  SLFLHIGITLYETFISFILVILLSILAAILLWYSKKLSEILEPYLVVLNSLPKSALAPLL 128

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+         +  ++  + H         +
Sbjct: 129 IVWLGATSKTIIIAGMSVAIFGS----ILNLYTAFINVDQEKIKLIYTLHGNRRHALTKV 184

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP   P  ++      G      I+ E  +        +GLG  I  S++      +++
Sbjct: 185 VLPSSVPAIISNMKVNIGLCLVGVIIGEFLA------AKSGLGYLIIYSSQVFKMDWLLM 238

Query: 558 GVLIMCCFVLALNRFL 573
            ++++C   + L   +
Sbjct: 239 SIILLCIMAMGLYALI 254



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I       L   SL  +   T      + ++ +L + + A L   S++L  +L P
Sbjct: 52  SSPSKITLCFLEMLKNRSLFLHIGITLYETFISFILVILLSILAAILLWYSKKLSEILEP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+        +I     AIF            ++Y +  N+ 
Sbjct: 112 YLVVLNSLPKSALAPLLIVWLGATSKTIIIAGMSVAIFGSI--------LNLYTAFINVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++  ++  +   +       + +P S+P ++ NM +++      V+  E +         
Sbjct: 164 QEKIKLIYTLHGNRRHALTKVVLPSSVPAIISNMKVNIGLCLVGVIIGEFLAAKS----- 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I  + +   +  +L +++ +  +      L+
Sbjct: 219 -GLGYLIIYSSQVFKMDWLLMSIILLCIMAMGLYALI 254


>gi|116334430|ref|YP_795957.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099777|gb|ABJ64926.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 317

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 7/160 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +     +A +++  F    A         R   +L P+++++  IP + +    L   V 
Sbjct: 97  SFAVTFAAALVATPFAVGTAIFMTEISPNRGRKLLQPVIELLVGIPSVVYGFIGLAVVVP 156

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +L  G   G  ++A F +F   +  +T     SL ++PR  +E S +   + WQ   
Sbjct: 157 FMRHLVGGSGFGI-ISATFVLFVMVLPTITSMTVDSLRSVPRYYKEASLALGATRWQTVS 215

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + +  + PG++  ++  M+  +   +A +M++    ++P
Sbjct: 216 RVILRSATPGILTAVIFGMARAFGEALAVQMVIGNAAIMP 255



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 78/254 (30%), Gaps = 19/254 (7%)

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
               P +   +   R     R    +   +  S   +  ++ +    +    + GIA  +
Sbjct: 7   QLRKPDAQPNEWAVRLHHATRATREDWLGKAISYLCIGVIILVVASMLWFITSKGIATFT 66

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVL----IIIASIIWIP--VGIWIGFRP----H 413
             ++          +    G I    ++V        A+++  P  VG  I         
Sbjct: 67  QNHVSLGKFLTGTNWAPDQGQIGALPMIVGSFAVTFAAALVATPFAVGTAIFMTEISPNR 126

Query: 414 ISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
               +QP  +LL   P+ V+         P +   V        +  + ++       I 
Sbjct: 127 GRKLLQPVIELLVGIPSVVYGFIGLAVVVPFMRHLVGGSGFG-IISATFVLFVMVLPTIT 185

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              +    + P  +KE + +   T W+    +IL    P  +T  I     A+  ++  +
Sbjct: 186 SMTVDSLRSVPRYYKEASLALGATRWQTVSRVILRSATPGILTAVIFGMARAFGEALAVQ 245

Query: 526 VASWGHIHLRTTGL 539
           +       +    +
Sbjct: 246 MVIGNAAIMPKNLI 259


>gi|239941604|ref|ZP_04693541.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239988069|ref|ZP_04708733.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291445048|ref|ZP_06584438.1| glycine betaine/L-proline ABC transporter [Streptomyces roseosporus
           NRRL 15998]
 gi|291347995|gb|EFE74899.1| glycine betaine/L-proline ABC transporter [Streptomyces roseosporus
           NRRL 15998]
          Length = 289

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 11/192 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---SIGYIVNHFTYQDVLYVIWLGC 384
           P         +     L +    +   + I   W     +  I  +      + + W   
Sbjct: 37  PSPAPAAPERRITWRKLVVLPAVLAVILVITYVWISNIHLDSIAENSLSGGNVQLRWWQH 96

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           + +  +    ++  II IP+GI +  R     +      A +  A PA     L+V  + 
Sbjct: 97  VRLTAISTFWVL--IIAIPLGIALTRRRLRKAAPAFTALANIGQATPAIGLLALLVIWLG 154

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  + + +  +      +L N +AG  A   +  E A    ++G      + LP  
Sbjct: 155 IGPRTAIIGIVIYAVL----PVLSNTVAGLRAIEPNMIEAARGMGMSGRGVLLKVELPLA 210

Query: 503 FPYYVTGAITAC 514
            P  + G  TA 
Sbjct: 211 VPLILAGVRTAL 222



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 63/195 (32%), Gaps = 13/195 (6%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P   +         L+    V+ +I ++ +          +  I   +L   ++     +
Sbjct: 39  PAPAAPERRITWRKLVVLPAVLAVILVITYVWISN---IHLDSIAENSLSGGNVQLRWWQ 95

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                  +    L+          + R  +       + +I Q+ P +G L   V++   
Sbjct: 96  HVRLTAISTFWVLIIAIPLGIALTRRRLRKAAPAFTALANIGQATPAIGLLALLVIWLGI 155

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                       AI  I    V  +  +    L  I  ++ E +R   +SG      + +
Sbjct: 156 G--------PRTAIIGIVIYAVLPVLSNTVAGLRAIEPNMIEAARGMGMSGRGVLLKVEL 207

Query: 186 PFSMPGLVWNMMMSM 200
           P ++P ++  +  ++
Sbjct: 208 PLAVPLILAGVRTAL 222


>gi|212691391|ref|ZP_03299519.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855]
 gi|212666001|gb|EEB26573.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855]
          Length = 395

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|126734192|ref|ZP_01749939.1| ABC transporter, permease protein, putative [Roseobacter sp. CCS2]
 gi|126717058|gb|EBA13922.1| ABC transporter, permease protein, putative [Roseobacter sp. CCS2]
          Length = 306

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 4/167 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     +R + M ++P     Q+IPIL  
Sbjct: 96  TSRRSLVYHGWVTLSATLLGFAIGTGLGILLAVGIVYNRAMNMSVMPWAIASQTIPILAL 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    +    + + +  F    + +   M + L +      ++ R++  S
Sbjct: 156 APMIIVMLGSIGIQGLFPKAVISAYLSF----FPVVVGMVKGLRSPDGMQLDLLRTYYAS 211

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             Q FW L +P S+P L  ++ + +S      + +E+          
Sbjct: 212 PNQAFWKLRLPASVPYLFASLKIGISASLVGAIVAELPTGARAGFGA 258



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 63/159 (39%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++   I + + I + + I +   ++  + P+A      P     P++
Sbjct: 100 SLVYHGWVTLSATLLGFAIGTGLGILLAVGIVYNRAMNMSVMPWAIASQTIPILALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +      +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVMLGSIGIQGLFPKAVISAYLSFFPVVVGMVKGLRSPDGMQLDLLRTYYASPNQAFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            LP   PY           +   +IV+E+ +        
Sbjct: 220 RLPASVPYLFASLKIGISASLVGAIVAELPTGARAGFGA 258


>gi|29833948|ref|NP_828582.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29611073|dbj|BAC75117.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 250

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 72/200 (36%), Gaps = 15/200 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +       ++++ L+     A LA +       ++ +  I+ +IP L   +  +
Sbjct: 51  LLDAVVQHLQLTAVSVLVGLVIALPLAVLARRWGWAAGPVLAVTTILYTIPSLAMFSLLL 110

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             +          +    +  +    +  +  ++   L  +P +  + +R       +  
Sbjct: 111 PVYGL--------SAALVVAGLVLYSLTLLVRNILAGLRAVPEETRQAARGMGYGPVRLL 162

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P  +  + ++       V A  ++ VG  ++   G+G+ I   +       
Sbjct: 163 LTVELPLALPAAMAGLRIA------TVSAVSLVTVG-AIVGFGGLGNLIYAGMNTYFKAQ 215

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           +L A +  + +    D LL 
Sbjct: 216 VLTASVLCVVIAVAADLLLL 235



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +    V +++  +I +P+ +        +  +     +L   P+   F L++     Y L
Sbjct: 59  LQLTAVSVLVGLVIALPLAVLARRWGWAAGPVLAVTTILYTIPSLAMFSLLLPV---YGL 115

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +  L ++ L+++ +   ++ N++AG  A P + ++ A        R    + LP   P  
Sbjct: 116 SAALVVAGLVLY-SLTLLVRNILAGLRAVPEETRQAARGMGYGPVRLLLTVELPLALPAA 174

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A   A +   V  +  +G       GLG  I          +V+   ++     
Sbjct: 175 MAGLRIATVSAVSLVTVGAIVGFG-------GLGNLIYAGMNTYFKAQVLTASVLCVVIA 227

Query: 567 LALNRFL 573
           +A +  L
Sbjct: 228 VAADLLL 234


>gi|15965808|ref|NP_386161.1| iron ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|15075077|emb|CAC46634.1| Transport system permease [Sinorhizobium meliloti 1021]
          Length = 678

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 84/566 (14%), Positives = 174/566 (30%), Gaps = 62/566 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             F+L    +  L     +     + V ++       +L          M  ++ +  LF
Sbjct: 136 AVFLLSALPLIRLGWAGIKGLEGGEAVRVLFEAATFAALRNTLITAAGGMAISLFVGALF 195

Query: 83  TFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFL--------TFTVVYFMNLYPGKVI 132
            FV A    + +       ++P++ I   +  L ++            +           
Sbjct: 196 AFVVALTDIRGKLALSFAFMLPMM-IPPQVTALAWVEMSGPSSPLLKTLGLAPPLGSPQP 254

Query: 133 GAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              LA I  +   Q   + F ++   L   PRD  E +R    S W+ F  + +P S PG
Sbjct: 255 LYSLAGIALLLGVQHAPLVFLAVKAGLAAAPRDGVEAARLSGASPWRVFRDIVLPLSSPG 314

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++                      + GIG++             + A+L +   
Sbjct: 315 LIAGAAIAF---------------------VSGIGNF------------GIPAILGIPAS 341

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I     L+F     + +      T G     S ++ L      L          +  +  
Sbjct: 342 IETLPTLIFSRFASFGS-----STFGEIAVLSTLIALISAAGLLLQQRALKGRDYRLIGL 396

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
              +   TLG +R         + +   V+ +L +    +V    + +++ ++       
Sbjct: 397 AGARAAFTLGRLRIAAEALLWSILALLLVAPLLALVASSLVPAYGVPLSFDTMSLNAYGE 456

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPA 430
                   +     ++F      +    + IP G  +  R   ++S +    ++  A P 
Sbjct: 457 VLFRQSMTLTALKNSLFLASAAAVGLLAVTIPAGYLLVTRRGRLASLLAILIEIPYALPG 516

Query: 431 NVFFPLVVSCVS--YYHLNPNLWLSLLMIFGTQWYILFN-----VIAGASAFPNDFKEVA 483
            V     +   +     +  +L+ ++ +I    +          V++         +E A
Sbjct: 517 IVLAVAFILAFAAPLPLIGVSLYGTIWIILAAYFPSFLAVSLKPVMSAFLQMDPSLEEAA 576

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   R  R ++LP + P      I     A N   VS +            LG  I
Sbjct: 577 RLAGAGFLRRMRDVLLPLLAPAAGASVILVFLIAANELTVSALLWSAGTQT----LGVAI 632

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
               + GS        +++   V+ L
Sbjct: 633 FNLDDSGSSDLASALSVLVVVMVIGL 658


>gi|254464460|ref|ZP_05077871.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206685368|gb|EDZ45850.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 281

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 89/270 (32%), Gaps = 10/270 (3%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             + +   +     +            +QL         + + W  +V G+ + +     
Sbjct: 5   VLAVIVWCLGWWLNSRLANSPASKTRAVQLLVPAIFGITVLVVWELLVRGLEVSLVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             ++       +  +      T+ +  +   +I         I +     +   + P   
Sbjct: 65  PTVIAARFASSLPVLWEDFAQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGN 124

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            +AA P     P++V    +   +    + +++ F     +L N +AG        +++ 
Sbjct: 125 FVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVAGLRETSAMQRDLM 180

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  T W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I
Sbjct: 181 QTYAATYWQAFFKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGS-----PTVGMGFRI 235

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + S  + +   V   +++      A    +
Sbjct: 236 STSVGQLALDMVWAEIVVAALAGSAFYGLV 265



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 97/248 (39%), Gaps = 16/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF +   V+   ++  L   +     P  I      +L V  L +  ++T L+ 
Sbjct: 33  QLLVPAIFGITVLVVWELLVRGLEVSLVILPAPTVIAARFASSLPV--LWEDFAQTILKG 90

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            L   VI     F+ A L  +S  L   L+P+ + + ++PI+G     V++F   +  K 
Sbjct: 91  ALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKA 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F         M  +    L        ++ +++  + WQ F+ L +P ++P 
Sbjct: 151 AVVVVMVFF--------PMLVNTVAGLRETSAMQRDLMQTYAATYWQAFFKLRLPAALPF 202

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + +S +      + +E         P  G+G  I+ ++ +  L  +   ++     
Sbjct: 203 VFNGLKISTTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALA 257

Query: 252 IFLYDQLL 259
              +  L+
Sbjct: 258 GSAFYGLV 265


>gi|172059099|ref|YP_001806751.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171991616|gb|ACB62535.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 282

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           ++++    LA +  L      +  + L
Sbjct: 253 MIVLAVVALAADYLL-----TWVEKRL 274



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 256 LAVVALAADYLLTWVEKRLLKW 277


>gi|171316880|ref|ZP_02906089.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097961|gb|EDT42779.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 282

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585
           ++++    LA +  L      +  + L
Sbjct: 253 MIVLAVVALAADYLL-----TWVEKRL 274



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        VI  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETGIGFVIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSIFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 256 LAVVALAADYLLTWVEKRLLKW 277


>gi|218883951|ref|YP_002428333.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
 gi|218765567|gb|ACL10966.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus kamchatkensis 1221n]
          Length = 715

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 81/512 (15%), Positives = 177/512 (34%), Gaps = 42/512 (8%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIM---------QSIPILGFLT--FTVVYFM 124
            V + +   + A + A+ +  G +L+ IL ++           +  L +           
Sbjct: 204 TVFATILGVIVAYVLARYKFPGHMLLRILALIPLFNTPFINAYVVKLIWGPDGPVSALIN 263

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMT-FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            L+  K++   LA + A      + +   + Y S  NI    EE + +    G++ F  +
Sbjct: 264 ALFGYKLMIQGLAGVIAAQIVTFFPIVYLNAYNSFINIDPSTEEQAENLGAKGFRLFRTV 323

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++PG+    ++        + A  +      +     +G   A  I   ++ A+  
Sbjct: 324 TLPLALPGIAAGSILVFVFSLEDLGAPIVFNAQSLMSYKIFMGIRSATGIIAPEIAALGI 383

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
            +L +  V FL  +            +   R+  +           R+   L  I     
Sbjct: 384 ILLLITLVSFLAIR-----------NYVSVRSYAMISRGGRFNPRIRRPGVLGLITVYLA 432

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV-----VCGVAIG 358
            F   L   + ++   L  +    P              +       +        +   
Sbjct: 433 IFPIVLFAMLPQVGVVLISLGILKPYPGATGIELSIPDNIFIYISKVLSDPSIYRYLTNT 492

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           + +  I  I+  F    V Y +    I     ++  +  S + IP G+ +          
Sbjct: 493 LVYAGISVILAVFLATAVGYSVSRLKIKWLANILDALSTSPLAIP-GLVLAL--GYYYFF 549

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASAFP 476
              A+ L+        P  ++ +     +  +W   ++ F      Y++ +V AG     
Sbjct: 550 YMLAEALSPI-----IPGALTYLMPGSPSFAVWFVFIIAFSVRRLPYVVRSVFAGFQQVH 604

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            + +E A +   + ++    +ILP I  Y ++GA+   G  + A+ VS   ++G ++   
Sbjct: 605 ENLEEAAMNLGASRFKVVFGVILPFIIGYILSGAL--LGFIYMATEVSTSVTFGGMNSDQ 662

Query: 537 TGLGAYIAE--STEKGSFPEVVLGVLIMCCFV 566
             L  Y+A+  +   G  P +V  +  +  F+
Sbjct: 663 APLTYYMAQNIAGVAGQGPMLVAAMGTILIFI 694


>gi|310816313|ref|YP_003964277.1| putative transport system permease abc transporter protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755048|gb|ADO42977.1| putative transport system permease abc transporter protein
           [Ketogulonicigenium vulgare Y25]
          Length = 250

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +   + + ++LL       L         +L   ++   S P+   +   ++ F    
Sbjct: 59  TAVSYFAGIGLALLIGIPLGFLMGLVPTADKMLNMWVNTFLSAPLSALVPVIMILFGLGT 118

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P          I  +F   VW +       + +I   L E+S+SF+ + +++   + V  
Sbjct: 119 P--------TVIVTVFMFAVWIIVLDTRAGVMHITPSLMEMSKSFQANRYER-TKMMVLS 169

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  + + M      +   + +V+G  ++ + G+G+  +L  +   +      ++ 
Sbjct: 170 ALPEILAGVRLGM------IRGVKGVVIGQLLVSIIGVGALFSLYQQNFLMAHFWALVVI 223

Query: 248 MLGVIFLYDQLLFR 261
           M     L  +++ R
Sbjct: 224 MFTCALLLAEIVAR 237



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 21/231 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW----------LGCITMFRVVVLIIIAS 398
             ++  V +      +G ++    + +VL  +              IT       I +A 
Sbjct: 12  ASLLIWVILWEIVGRLGLVMLFPPFTEVLAAMGEVVTSRSFGEAIRITAVSYFAGIGLAL 71

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +I IP+G  +G  P     +  +     + P +   P+++             + + +  
Sbjct: 72  LIGIPLGFLMGLVPTADKMLNMWVNTFLSAPLSALVPVIMILFGLG----TPTVIVTVFM 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              W I+ +  AG         E++ SF    +   + ++L    P  + G         
Sbjct: 128 FAVWIIVLDTRAGVMHITPSLMEMSKSFQANRYERTKMMVL-SALPEILAGVRLGMIRGV 186

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              ++      G + +   G+GA  +   +          V+IM    L L
Sbjct: 187 KGVVI------GQLLVSIIGVGALFSLYQQNFLMAHFWALVVIMFTCALLL 231


>gi|89067337|ref|ZP_01154850.1| ABC transporter, permease protein [Oceanicola granulosus HTCC2516]
 gi|89046906|gb|EAR52960.1| ABC transporter, permease protein [Oceanicola granulosus HTCC2516]
          Length = 307

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 8/178 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL  +   T    L    +      + A     SR   M L+P   I Q+IPI+ 
Sbjct: 96  AFSKRSLLYHGWITLQATLWGFALGTTLGILGAIAIVYSRVADMSLMPWAIISQTIPIVA 155

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +V         V G  +           + +   M + L +      ++ +++  
Sbjct: 156 LAPMIIVL---SSQVGVEGRGVPKAIISAYLCYFPVLVGMVKGLRSPAPSQLDLLKTYNA 212

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  Q F+ L +P S+P L  ++ + ++      +  E+         + G+G+ I + 
Sbjct: 213 SARQSFFKLRLPASVPYLFASLKVGIAAALVGTIVGEL-----PTGAISGLGARILIG 265



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 6/198 (3%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G   G  W++ G +           +++ G IT+   +    + + + I   I I +   
Sbjct: 77  GQVAGELWKTTGEMALRGRAFSKRSLLYHGWITLQATLWGFALGTTLGILGAIAIVYSRV 136

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-NPNLWLSLLMIFGTQWYILFNVIAGA 472
               + P+A +    P     P+++   S   +    +  +++  +   + +L  ++ G 
Sbjct: 137 ADMSLMPWAIISQTIPIVALAPMIIVLSSQVGVEGRGVPKAIISAYLCYFPVLVGMVKGL 196

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            +      ++  +++ +  + +  + LP   PY           A   +IV E+ +    
Sbjct: 197 RSPAPSQLDLLKTYNASARQSFFKLRLPASVPYLFASLKVGIAAALVGTIVGELPTGA-- 254

Query: 533 HLRTTGLGAYIAESTEKG 550
               +GLGA I    + G
Sbjct: 255 ---ISGLGARILIGDQFG 269


>gi|56808144|ref|ZP_00365928.1| COG0573: ABC-type phosphate transport system, permease component
           [Streptococcus pyogenes M49 591]
 gi|209559509|ref|YP_002285981.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes NZ131]
 gi|209540710|gb|ACI61286.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes NZ131]
          Length = 311

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 72/178 (40%), Gaps = 12/178 (6%)

Query: 52  VPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPIL 104
            P   +V  +P   A           ++S +    +A  AA        +    +L P +
Sbjct: 70  QPSVKNVAGIPYLGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAV 129

Query: 105 DIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +++  IP + +    L   V +  +++ G   G  L+ +  +F   +  +TF    SL  
Sbjct: 130 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRA 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 189 VPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLI-IIASIIWIP--VGIWIGFR----PHISSKIQPFA 422
             + ++V  + +LG + M     L+ I+++II  P  +G  +        + +  +QP  
Sbjct: 70  QPSVKNVAGIPYLGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAV 129

Query: 423 QLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +LL   P+ V+         P + S            + +L +      + F       A
Sbjct: 130 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRA 188

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P  ++E + +   T W+    ++L    P   T  I     A+  ++  ++       +
Sbjct: 189 VPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVM 248

Query: 535 RTT 537
            ++
Sbjct: 249 PSS 251


>gi|15925435|ref|NP_372969.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15928024|ref|NP_375557.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus N315]
 gi|21284098|ref|NP_647186.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49484662|ref|YP_041886.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|49487228|ref|YP_044449.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652260|ref|YP_187249.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160997|ref|YP_495025.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88196379|ref|YP_501202.1| amino acid ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268882|ref|YP_001247825.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|150394956|ref|YP_001317631.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|151222556|ref|YP_001333378.1| glycine betaine/carnitine/choline transport system permease protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156980760|ref|YP_001443019.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|161510644|ref|YP_001576303.1| glycine betaine/L-proline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221140795|ref|ZP_03565288.1| glycine betaine/L-proline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253314781|ref|ZP_04837994.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|253730123|ref|ZP_04864288.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|255007220|ref|ZP_05145821.2| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257423928|ref|ZP_05600357.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257426611|ref|ZP_05603013.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429246|ref|ZP_05605633.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257431892|ref|ZP_05608255.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257434853|ref|ZP_05610904.1| glycine betaine/L-proline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus M876]
 gi|257794785|ref|ZP_05643764.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9781]
 gi|258407465|ref|ZP_05680608.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9763]
 gi|258422207|ref|ZP_05685119.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9719]
 gi|258439599|ref|ZP_05690345.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A9299]
 gi|258442844|ref|ZP_05691404.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A8115]
 gi|258446455|ref|ZP_05694610.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A6300]
 gi|258450428|ref|ZP_05698520.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A6224]
 gi|258451249|ref|ZP_05699282.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A5948]
 gi|258455195|ref|ZP_05703155.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A5937]
 gi|262048847|ref|ZP_06021728.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus D30]
 gi|262051584|ref|ZP_06023805.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus 930918-3]
 gi|269204078|ref|YP_003283347.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893896|ref|ZP_06302128.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8117]
 gi|282902361|ref|ZP_06310254.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906789|ref|ZP_06314637.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282909765|ref|ZP_06317574.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282912011|ref|ZP_06319807.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282915306|ref|ZP_06323083.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282917799|ref|ZP_06325549.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|282920434|ref|ZP_06328157.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9765]
 gi|282921029|ref|ZP_06328747.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925935|ref|ZP_06333583.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|282928482|ref|ZP_06336083.1| osmoprotectant transport system permease [Staphylococcus aureus
           A10102]
 gi|283767530|ref|ZP_06340445.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|283959229|ref|ZP_06376670.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|284025466|ref|ZP_06379864.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus 132]
 gi|293497701|ref|ZP_06665555.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293511281|ref|ZP_06669977.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus M809]
 gi|293549889|ref|ZP_06672561.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294848995|ref|ZP_06789740.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9754]
 gi|295405140|ref|ZP_06814953.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8819]
 gi|295429034|ref|ZP_06821656.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296275605|ref|ZP_06858112.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297209734|ref|ZP_06926130.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297244195|ref|ZP_06928085.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8796]
 gi|297589474|ref|ZP_06948115.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300910746|ref|ZP_07128196.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304379645|ref|ZP_07362378.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|13702395|dbj|BAB43536.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus N315]
 gi|14248219|dbj|BAB58607.1| probable glycine betaine/carnitine/choline ABC transporter
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205541|dbj|BAB96234.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49242791|emb|CAG41516.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245671|emb|CAG44150.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286446|gb|AAW38540.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126971|gb|ABD21485.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87203937|gb|ABD31747.1| amino acid ABC transporter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147741951|gb|ABQ50249.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|149947408|gb|ABR53344.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|150375356|dbj|BAF68616.1| glycine betaine/carnitine/choline transport system permease protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156722895|dbj|BAF79312.1| probable glycine betaine/carnitine/choline ABC transporter
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369453|gb|ABX30424.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253726151|gb|EES94880.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257272946|gb|EEV05048.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257276242|gb|EEV07693.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279727|gb|EEV10314.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282771|gb|EEV12903.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257285449|gb|EEV15565.1| glycine betaine/L-proline ABC transporter membrane protein
           [Staphylococcus aureus subsp. aureus M876]
 gi|257788757|gb|EEV27097.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9781]
 gi|257840977|gb|EEV65428.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9763]
 gi|257841638|gb|EEV66075.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9719]
 gi|257847375|gb|EEV71377.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A9299]
 gi|257851965|gb|EEV75899.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A8115]
 gi|257854523|gb|EEV77471.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A6300]
 gi|257856520|gb|EEV79429.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus A6224]
 gi|257861041|gb|EEV83856.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A5948]
 gi|257862406|gb|EEV85174.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus A5937]
 gi|259160568|gb|EEW45591.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus 930918-3]
 gi|259163105|gb|EEW47666.1| probable glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus D30]
 gi|262076368|gb|ACY12341.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269942027|emb|CBI50439.1| putative glycine betaine/carnitine/cholinetransport system permease
           protein [Staphylococcus aureus subsp. aureus TW20]
 gi|282312764|gb|EFB43168.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|282315444|gb|EFB45828.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282318084|gb|EFB48444.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|282321027|gb|EFB51361.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282323707|gb|EFB54023.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282326339|gb|EFB56643.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282329688|gb|EFB59209.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282589877|gb|EFB94961.1| osmoprotectant transport system permease [Staphylococcus aureus
           A10102]
 gi|282594380|gb|EFB99366.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9765]
 gi|282596820|gb|EFC01779.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282763954|gb|EFC04082.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8117]
 gi|283461409|gb|EFC08493.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|283471666|emb|CAQ50877.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus aureus subsp. aureus ST398]
 gi|283788821|gb|EFC27648.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|285818106|gb|ADC38593.1| Osmotically activated L-carnitine/choline ABC transporter, permease
           protein OpuCD [Staphylococcus aureus 04-02981]
 gi|290918936|gb|EFD96012.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291096632|gb|EFE26890.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291465907|gb|EFF08437.1| glycine betaine/carnitine/choline transport system permease
           [Staphylococcus aureus subsp. aureus M809]
 gi|294824374|gb|EFG40798.1| osmoprotectant transport system permease [Staphylococcus aureus
           A9754]
 gi|294970085|gb|EFG46103.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8819]
 gi|295126793|gb|EFG56437.1| osmoprotectant transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296885407|gb|EFH24344.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297178973|gb|EFH38218.1| osmoprotectant transport system permease [Staphylococcus aureus
           A8796]
 gi|297577985|gb|EFH96698.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298695713|gb|ADI98935.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300887726|gb|EFK82921.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302334071|gb|ADL24264.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus JKD6159]
 gi|302752315|gb|ADL66492.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304341821|gb|EFM07727.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312437134|gb|ADQ76205.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|312830790|emb|CBX35632.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130918|gb|EFT86903.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|315194946|gb|EFU25334.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315197345|gb|EFU27682.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320139152|gb|EFW31034.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142594|gb|EFW34402.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439674|gb|EGA97393.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O11]
 gi|323442661|gb|EGB00288.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O46]
 gi|329315131|gb|AEB89544.1| Binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus T0131]
 gi|329723711|gb|EGG60240.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus aureus subsp. aureus 21172]
 gi|329726629|gb|EGG63090.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus aureus subsp. aureus 21189]
 gi|329730426|gb|EGG66816.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus aureus subsp. aureus 21193]
          Length = 231

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L     +  L  +  ++ + L       L A+  +L   ++ I +I+Q++P++  
Sbjct: 15  TNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 +  +F   +  +  + Y  + ++  ++++  +   ++
Sbjct: 75  LAILMLVMGLG--------SETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSM 200
             Q    + +P S+  ++  + +++
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    +   V  ++ A++I IP+GI +     +S  +   A ++   P
Sbjct: 11  NYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVP 70

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++  +       +  + L +       I+ N   G ++   + K+      +T
Sbjct: 71  VIAMLAILMLVMGLG----SETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
             +  R I LP      + G   A 
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151


>gi|283797331|ref|ZP_06346484.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium sp. M62/1]
 gi|291075003|gb|EFE12367.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Clostridium sp. M62/1]
 gi|295090482|emb|CBK76589.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Clostridium cf. saccharolyticum K10]
 gi|295115411|emb|CBL36258.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SM4/1]
          Length = 266

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 75/199 (37%), Gaps = 10/199 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            +      +     +T+F  +V  ++  ++ +   + +     +S  ++P+  +L + P 
Sbjct: 66  VSMTADGSIFVHMGVTLFETLVSFVLVVLLGLSGAMLLWASRTVSDLLEPYLVMLNSLPK 125

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           +   P+++  +        +    + +FG+    +  +  G S    +  ++  S   T 
Sbjct: 126 SALAPILIVWLGNNMNTIIVAAVSVAVFGS----ILTLHNGFSTMDPEQIKLIYSLGGTK 181

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
               R ++LPG  P  ++      G      I+ E  +         GLG  I   ++  
Sbjct: 182 KDVLRKVLLPGSLPLIISNMKVNVGLCLVGVIIGEFLA------ADRGLGYLIIYGSQVF 235

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               VV+ ++I+C     L
Sbjct: 236 KMDMVVMSIVILCFMSALL 254



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 80/217 (36%), Gaps = 14/217 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  ++          S+  +   T    L + V+ +L     A L   SR +  +L P
Sbjct: 56  SSPSRMLSCFVSMTADGSIFVHMGVTLFETLVSFVLVVLLGLSGAMLLWASRTVSDLLEP 115

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  N     ++ A   A+F            +++     + 
Sbjct: 116 YLVMLNSLPKSALAPILIVWLGNNMNTIIVAAVSVAVFGSI--------LTLHNGFSTMD 167

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++  S   +       + +P S+P ++ NM +++      V+  E +         
Sbjct: 168 PEQIKLIYSLGGTKKDVLRKVLLPGSLPLIISNMKVNVGLCLVGVIIGEFLA------AD 221

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            G+G  I    +   +  ++ +++ +  +  L  Q +
Sbjct: 222 RGLGYLIIYGSQVFKMDMVVMSIVILCFMSALLYQAI 258


>gi|300312684|ref|YP_003776776.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300075469|gb|ADJ64868.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 284

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 10/192 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+   V+  +I S+  +  GI +G    +S     + Q+  + P  V   + V   
Sbjct: 88  QVLVTLEETVLGFLIGSVAGVIAGIVLGRNKLLSDVFSLYIQIANSIPRVVLGSIFVIAF 147

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +      +++ F        N   G           A     +  +    +++P 
Sbjct: 148 GLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIANAQILGASRRQVTMAVVIPS 203

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
              + +     + G A   ++V E            G+G  I+ +    +   V   +++
Sbjct: 204 ALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAAMIV 257

Query: 562 MCCFVLALNRFL 573
           +    LA +  L
Sbjct: 258 LAVVALAADWLL 269



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 83/223 (37%), Gaps = 17/223 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            I D +        L      T    +   +I  +   +   +  +++ L  V    + I
Sbjct: 71  QIYDWMVEGTSQGPLWTQVLVTLEETVLGFLIGSVAGVIAGIVLGRNKLLSDVFSLYIQI 130

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
             SIP +   +  V+ F      KV  A +   F +F         + +Q +    R + 
Sbjct: 131 ANSIPRVVLGSIFVIAFGLGMASKVALAVVMVFFVVFA--------NAFQGVREADRYMI 182

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             ++    S  Q    + +P ++  ++ ++ +S     F +V +   VVG+ +    GIG
Sbjct: 183 ANAQILGASRRQVTMAVVIPSALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIG 236

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             I+ A    +   +  AM+ +  V    D L   L R ++ W
Sbjct: 237 LLISTAQGAFNASGVFAAMIVLAVVALAADWLLHALERRLLKW 279


>gi|237785600|ref|YP_002906305.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758512|gb|ACR17762.1| ABC-type transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 283

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 83/235 (35%), Gaps = 23/235 (9%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ ++      I  TT    + D+    L    + +        ++ + +I L       
Sbjct: 54  VLILVVFGAWFIWRTTT--TLTDVEMRQLAWSVIGRRTLEHLRIVVISAIIVLAVGLPLG 111

Query: 88  TLAAKSRRLGMVLVPIL----DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            +  + R     LVPI+    +  QS P++G +    ++     P  ++   L A   + 
Sbjct: 112 IVLTRQR--MKFLVPIVTGIGNAGQSAPVIGVIVLLAMWLGFGTPVAILSLSLYAFLPVL 169

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                    +    L  + ++L E +R   ++ WQ  W + +P +   ++  +  +    
Sbjct: 170 A--------NTIAGLQGVDKELIESARGMGMTPWQILWRIEIPLASSVILNGVRTA---- 217

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              +V    +    T I   G+G+ I   I       ++   + +  +    D +
Sbjct: 218 ---LVLLVGVGAFATFIDAGGLGALIQSGIVLFRYRVLVSGAILVALLALFVDWI 269



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 77/253 (30%), Gaps = 10/253 (3%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           T    R         L   +    ++      ++        W++   + +    Q    
Sbjct: 24  THRASRRGLSSKMRNLEMTKEDKLLVFGTPVLILVVFGAWFIWRTTTTLTDVEMRQLAWS 83

Query: 379 VIWLGCITMFR-VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           VI    +   R VV+  II   + +P+GI           + P    +     +     V
Sbjct: 84  VIGRRTLEHLRIVVISAIIVLAVGLPLGIV--LTRQRMKFLVPIVTGIGNAGQSAPVIGV 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++ +         L +       +L N IAG      +  E A    +T W+    I
Sbjct: 142 IVLLAMWLGFGTPVAILSLSLYAFLPVLANTIAGLQGVDKELIESARGMGMTPWQILWRI 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P      + G  TA          +         +   GLGA I        +  +V 
Sbjct: 202 EIPLASSVILNGVRTALVLLVGVGAFA-------TFIDAGGLGALIQSGIVLFRYRVLVS 254

Query: 558 GVLIMCCFVLALN 570
           G +++    L ++
Sbjct: 255 GAILVALLALFVD 267


>gi|297202874|ref|ZP_06920271.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
 gi|197715213|gb|EDY59247.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083]
          Length = 292

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I +G    ++  + P+ ++L + P  V  P+ V        +      +L+ F       
Sbjct: 118 IALGRITLLADVLGPYIKVLNSIPRIVLAPIFVIWFGLGPASKVASAVVLVFFPVF---- 173

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           FN   GA     +    A     +  R    +++P    +  T    + G A   +IV E
Sbjct: 174 FNAFQGAREVDRNLVANARILGASDRRVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGE 233

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                     T G+G  +A+S    +   V   ++I+    L     L      +  R +
Sbjct: 234 YIG------ATKGIGLLVAQSQGTFNAAGVYAAMVILAVVALLAEGLL-----TFAERRI 282



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
              + SL +    T    L   V+ ++   V+     +   L  VL P + ++ SIP + 
Sbjct: 85  GTALGSLGEQIWYTLYEALLGWVVGVVAGVVFGIALGRITLLADVLGPYIKVLNSIPRIV 144

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V++F      KV  A +   F +         F+ +Q    + R+L   +R    
Sbjct: 145 LAPIFVIWFGLGPASKVASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGA 196

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P +   +  ++ +S        +  E I          GIG  +A +  
Sbjct: 197 SDRRVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVAQSQG 250

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +   +  AM+ +  V  L + LL    R +  W
Sbjct: 251 TFNAAGVYAAMVILAVVALLAEGLLTFAERRIFRW 285


>gi|149916445|ref|ZP_01904964.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
 gi|149809715|gb|EDM69569.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
          Length = 281

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 93/244 (38%), Gaps = 17/244 (6%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             ++R   P IF +   V+   +++ L         P  I        D+  L +   +T
Sbjct: 27  TRLTRLAVPVIFGVTILVIWEAVVHGLEISPILLPPPSQIAVTFAAKTDI--LWEDFVQT 84

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  L+  VI     F+ A    +   L   L+P+ + + ++PI+G     V++F   +
Sbjct: 85  VIKGALTGYVIGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPIIGMAPILVMWFGFDW 144

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F         M  +  Q L +      ++ R++    W     L +P 
Sbjct: 145 QSKAAVVVVMVFF--------PMLVNTVQGLQDTNAMQRDLMRTYAAGYWMTLLKLRLPA 196

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   + +  +      + +E         P+ G+G  I+ ++ +  L  + +A + 
Sbjct: 197 AMPFIFNGLKIGSTLALIGAIVAEFFGS-----PIKGMGFRISTSVGQLALDLV-WAEIA 250

Query: 248 MLGV 251
           +  +
Sbjct: 251 VAAM 254



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN------------HFTYQDVL 377
            +L      R    L      V+ GV I + W+++ + +               T+    
Sbjct: 15  WWLNHVLAHRPKTRLTRLAVPVIFGVTILVIWEAVVHGLEISPILLPPPSQIAVTFAAKT 74

Query: 378 YVIWLGCITMFR--VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
            ++W   +       +   +I       + + I   P +   + P    +AA P     P
Sbjct: 75  DILWEDFVQTVIKGALTGYVIGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPIIGMAP 134

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++V    +   +    + +++ F     +L N + G        +++  ++    W    
Sbjct: 135 ILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVQGLQDTNAMQRDLMRTYAAGYWMTLL 190

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P+   G       A   +IV+E            G+G  I+ S  + +   V
Sbjct: 191 KLRLPAAMPFIFNGLKIGSTLALIGAIVAEFFGSPIK-----GMGFRISTSVGQLALDLV 245

Query: 556 VLGVLIMCCFVLAL 569
              + +      A 
Sbjct: 246 WAEIAVAAMAGSAF 259


>gi|229088550|ref|ZP_04220210.1| ABC transporter permease protein [Bacillus cereus Rock3-44]
 gi|228694756|gb|EEL48072.1| ABC transporter permease protein [Bacillus cereus Rock3-44]
          Length = 179

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++  II   + W+P+         I+  + P+  +L A P     P+++         PN
Sbjct: 1   MLGTIIATILWWVPL---------IARVLDPYLVVLNAMPKVALGPIIIVIFG-----PN 46

Query: 450 LWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  S+ M +  +    +  + +      +++ +V  +F    W+ ++ +ILP  FP  ++
Sbjct: 47  ISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQTYQQVILPSSFPAIIS 106

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                 G +W   I  E+       +   GLG  I+   +  +F  V+L VL+ C     
Sbjct: 107 TLKVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNFTLVLLSVLLTCILATL 160

Query: 569 LNRFL 573
           +  F+
Sbjct: 161 MYVFV 165



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 68/178 (38%), Gaps = 14/178 (7%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + AT+      +  VL P L ++ ++P +      +V F       +    + +I  
Sbjct: 2   LGTIIATILWWVPLIARVLDPYLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIII 61

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                       +Y +   +  +  +V  +F  + WQ +  + +P S P ++  + +++ 
Sbjct: 62  TILV--------IYSAFQEVDSNYIKVMDTFGANKWQTYQQVILPSSFPAIISTLKVNVG 113

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             W  V+  E++V         G+G  I+   +  +   +L ++L    +  L    +
Sbjct: 114 LSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLVLLSVLLTCILATLMYVFV 165


>gi|284034633|ref|YP_003384564.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283813926|gb|ADB35765.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 237

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 11/207 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           + +I +   +     +       +    + + IA++I +P+G+ IG     +        
Sbjct: 6   LDFISDSANWAGAEGIGNRILQHLGYTFLSLAIAALIALPIGLLIGHTRRGAFLAINTGN 65

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
              A P      L+V  +    +   + L +L I      I+ +  AG S       + A
Sbjct: 66  AARALPTLGLLTLIVLLIGIGRVPVIIALVVLGIP----PIMASTYAGVSGVDRSTIDAA 121

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +TG      + +P   P  ++G  +A     + + V+   + G       GLG Y+
Sbjct: 122 RGMGMTGREILTKVEIPIALPLIISGLRSATLQIVSTATVAAYVALG-------GLGRYV 174

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
            +      FP+++ G +++    + L+
Sbjct: 175 IDGLSLRDFPQMLTGAVLVAVLAILLD 201



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 74/202 (36%), Gaps = 16/202 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +       ++ I+ L       L   +RR   + +   +  +++P         +  + 
Sbjct: 26  LQHLGYTFLSLAIAALIALPIGLLIGHTRRGAFLAINTGNAARALPT--------LGLLT 77

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L    +    +  I A+    +  +  S Y  +  + R   + +R   ++G +    + +
Sbjct: 78  LIVLLIGIGRVPVIIALVVLGIPPIMASTYAGVSGVDRSTIDAARGMGMTGREILTKVEI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  +  +          +  + +G       G+G Y+   +  +D   +L   
Sbjct: 138 PIALPLIISGLRSATLQIVSTATVAAYVALG-------GLGRYVIDGLSLRDFPQMLTGA 190

Query: 246 LTMLGVIFLYDQLLFRPMIVWS 267
           + +  +  L D L+F  +  ++
Sbjct: 191 VLVAVLAILLD-LVFAAIARYA 211


>gi|188580347|ref|YP_001923792.1| ABC transporter inner hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343845|gb|ACB79257.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium populi BJ001]
          Length = 305

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   +          ++    +T+   ++   I S++ I + + I     + + + P+  
Sbjct: 77  LWRSIVGMPLGSKRSLLTHAWVTLSATLMGFAIGSLLGIALAVAIVHLRSVEASLMPWIV 136

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  +    L   L  +++  +   + +   ++ G +A     +++ 
Sbjct: 137 ASQTVPILAVAPIIIVALGAAGLTGLLPKAVIAAYLCFFPVTVGMVKGLNAPDRIQRDLM 196

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    +  P   PY       A   +   +IV+E+ +         GLGA +
Sbjct: 197 RTYSASRGQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQ-----AGLGARL 251

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 252 LAGSYYGQTIQIW 264



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L    I  L     A      R +   L+P +   Q++PIL   
Sbjct: 88  SKRSLLTHAWVTLSATLMGFAIGSLLGIALAVAIVHLRSVEASLMPWIVASQTVPILAVA 147

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V         ++   + A +  F    + +T  M + L    R   ++ R++  S 
Sbjct: 148 PIIIVALGAAGLTGLLPKAVIAAYLCF----FPVTVGMVKGLNAPDRIQRDLMRTYSASR 203

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P ++P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 204 GQILARLRWPAALPYLFASLKIAVAASLVGTIVAELPTGAQA-----GLGARLLAGSYYG 258

Query: 237 DLLAIL 242
             + I 
Sbjct: 259 QTIQIW 264


>gi|254881663|ref|ZP_05254373.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319643048|ref|ZP_07997681.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
 gi|254834456|gb|EET14765.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317385329|gb|EFV66275.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
          Length = 395

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|84501013|ref|ZP_00999248.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
 gi|84391080|gb|EAQ03498.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
          Length = 243

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I   +   L++    + +  +    +P   +    +      + ++A  T   +L  + +
Sbjct: 7   ILGTVLLALLVWQAVVTVFALPRFILPGPHLVFGTLWTSRALIAEHAWVTVTEVLLGLGL 66

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                F  A + A S     +L P+L   Q++P+        ++       KV  A L  
Sbjct: 67  GAALGFASAIVMAASPVARSLLRPMLVFSQAVPVFALAPILTLWLGYGLWSKVAMALLII 126

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F         +T + + +L   P    E++R       +  W++ VP ++PG    + +
Sbjct: 127 YF--------PVTSAFFDALMRTPTGWLELARVIGARPARILWHIRVPAALPGFASGLRL 178

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +       V A    ++G+ V    G+G  + LA     +  +  A++ +  +  L 
Sbjct: 179 A------AVYAPIGAIIGEWVGASRGLGYLMLLANGRAKIDLMFAALIVLAVLTLLL 229



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 76/227 (33%), Gaps = 10/227 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  + W  VV   A+        ++V    +     +     +T+  V++ + + + +  
Sbjct: 13  LALLVWQAVVTVFALPRFILPGPHLVFGTLWTSRALIAEHAWVTVTEVLLGLGLGAALGF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              I +   P   S ++P      A P     P++   + Y   +      L++ F    
Sbjct: 73  ASAIVMAASPVARSLLRPMLVFSQAVPVFALAPILTLWLGYGLWSKVAMALLIIYF---- 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +           P  + E+A        R   +I +P   P + +G   A   A   +I
Sbjct: 129 PVTSAFFDALMRTPTGWLELARVIGARPARILWHIRVPAALPGFASGLRLAAVYAPIGAI 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           + E          + GLG  +  +  +     +   ++++    L L
Sbjct: 189 IGEWVG------ASRGLGYLMLLANGRAKIDLMFAALIVLAVLTLLL 229


>gi|330719356|ref|ZP_08313956.1| phosphate ABC transporter permease PstC [Leuconostoc fallax KCTC
           3537]
          Length = 307

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 87/221 (39%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF--- 115
           A    L       +S L    +A   A        +R   ++ P+++++  IP + +   
Sbjct: 83  ALPMILGSFLVTFLSALLATPFAIGTALFMTEIAKKRGAKIMQPVIELLVGIPSVVYGFI 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LT  V    +++ G   G  LA    +F   +  +T     +L ++P    E + +   
Sbjct: 143 GLTIVVPVIRHIFGGSGFGI-LAGTIVLFVMILPTITSMTVDTLKSVPGHYRESALAIGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  + + +  + PG++  ++  M+  +   +A +M++                 T +
Sbjct: 202 TRWQMIYKVILRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPHNLISASSTLTSV 261

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +  +++   L  +   +L M  V  L  + + R
Sbjct: 262 LTMGIGNTVMGSLQNDVLWTLALILLIMSLVFNLIVRAIGR 302



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 25/223 (11%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF- 433
           +  + +   +     +  ++A+   I   +++    +   +  +QP  +LL   P+ V+ 
Sbjct: 81  IGALPMILGSFLVTFLSALLATPFAIGTALFMTEIAKKRGAKIMQPVIELLVGIPSVVYG 140

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P++                +L +      I    +    + P  ++E A + 
Sbjct: 141 FIGLTIVVPVIRHIFGGSGFGILAGTIVLFVMI-LPTITSMTVDTLKSVPGHYRESALAI 199

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------I 532
             T W+    +IL    P  +T  +     A+  ++  ++                    
Sbjct: 200 GATRWQMIYKVILRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPHNLISASSTLT 259

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            + T G+G  +  S +      + L +LIM      + R +  
Sbjct: 260 SVLTMGIGNTVMGSLQNDVLWTLALILLIMSLVFNLIVRAIGR 302


>gi|330467747|ref|YP_004405490.1| putative ABC transporter [Verrucosispora maris AB-18-032]
 gi|328810718|gb|AEB44890.1| putative ABC transporter [Verrucosispora maris AB-18-032]
          Length = 265

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 11/147 (7%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +     P        PA V  P+++  V            +++  G  W IL N  
Sbjct: 92  RWSVVRDLTSPILAYFRVLPAPVLIPVLLVAVGIGDATK----LIVIASGAVWPILLNTA 147

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  A      + A+++ +  W     +IL    P    GA  A G +    +VSE+   
Sbjct: 148 DGVRAVDEVQLDTAAAYRLRAWTR-HGLILRAATPQVFAGARQALGISLIVMVVSEML-- 204

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVV 556
               + T GLG  +       + PE+ 
Sbjct: 205 ----MSTDGLGFTVIRFQRTFAIPEMW 227



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 52/151 (34%), Gaps = 15/151 (9%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +   +  +  PIL   + +P    +   +V             +   +  I +  VW + 
Sbjct: 92  RWSVVRDLTSPILAYFRVLPAPVLIPVLLVAVGIG--------DATKLIVIASGAVWPIL 143

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            +    +  +     + + ++RL  W +   L +  + P +      ++      +V SE
Sbjct: 144 LNTADGVRAVDEVQLDTAAAYRLRAWTRHG-LILRAATPQVFAGARQALGISLIVMVVSE 202

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           M++  D      G+G  +    +   +  + 
Sbjct: 203 MLMSTD------GLGFTVIRFQRTFAIPEMW 227


>gi|237726314|ref|ZP_04556795.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434840|gb|EEO44917.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 395

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T      A++ +L F    A   ++    R    L P+++++  IP + +    L   V 
Sbjct: 178 TLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELLSGIPSVVYGFFGLIVIVP 237

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++   V    LA    +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 238 LIQKIFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPRAMREASLALGATRWQTIY 297

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +PFS+ G+   +++ +       +A  M+     VI      PL  I + IA  + E
Sbjct: 298 KVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGE 357

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                  Y  L +LGV+  +  +L
Sbjct: 358 APAGGAHYEALFLLGVVLFFITML 381



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
               T       + L   T++     I+ A    + V +++         S ++P  +LL
Sbjct: 160 FPTATPAPQFGFLPLITGTLWVSFFAILFALPFGLSVAVYMSEVADHRTRSFLKPVIELL 219

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           +  P+ V+         PL+    +       L  S+++       I+          P 
Sbjct: 220 SGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSIVLAIMALPTIITVSEDAMRNCPR 279

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P       +G +   G A   ++   + +     + TT
Sbjct: 280 AMREASLALGATRWQTIYKVVIPFSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTT 339


>gi|254385654|ref|ZP_05000977.1| ABC transporter permease [Streptomyces sp. Mg1]
 gi|194344522|gb|EDX25488.1| ABC transporter permease [Streptomyces sp. Mg1]
          Length = 254

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 15/186 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L             +++I L+     A LA + RR    ++ +  ++ +IP L   + 
Sbjct: 16  RELTDATVEHVWITGISVLIGLIVAVPLALLARRGRRWAAPVLGLTTLLYTIPSLAMFSL 75

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F       V G  L          +  +  ++   L  +P D+ E +R       +
Sbjct: 76  LLPLFGLSASLVVTGLVL--------YSLTILVRNVLAGLEAVPEDVREAARGMGYGPRR 127

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +    +++   G+G+ IA A+     
Sbjct: 128 LLWQVEMPLALPSVLAGIRIA-------TVSTIALTTIGSIVGKGGLGNLIAPAVSSSFK 180

Query: 239 LAILYA 244
             +L A
Sbjct: 181 AQVLTA 186



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 11/172 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + ++I  I+ +P+ +        ++ +     LL   P+   F L++        
Sbjct: 26  VWITGISVLIGLIVAVPLALLARRGRRWAAPVLGLTTLLYTIPSLAMFSLLLPLFGLSAS 85

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ NV+AG  A P D +E A        R    + +P   P  
Sbjct: 86  LVVTGLVLYSLTI----LVRNVLAGLEAVPEDVREAARGMGYGPRRLLWQVEMPLALPSV 141

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           + G   A       + +  +   G       GLG  IA +       +V+  
Sbjct: 142 LAGIRIATVSTIALTTIGSIVGKG-------GLGNLIAPAVSSSFKAQVLTA 186


>gi|167584139|ref|ZP_02376527.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 253

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 88/257 (34%), Gaps = 18/257 (7%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
            + P  I+ R         A + ++ ++      +     P    +  P+  D  SL   
Sbjct: 2   TMRPAAIAPRKLAPAAARAAALALLLVLLFRPAWLHALFAPFAD-NGAPVIYDRASLLDL 60

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVY 122
                  + ++ +I  L          +        V   +++I Q+ P +  L   V  
Sbjct: 61  TLAHLGTVAASSLIGTLLAIAAGIAVTRPWGADFLPVARSVVNIGQTFPPVAVLALAVPA 120

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                           + A+    +  +  S    + ++PRD+ + +R   +SGWQ+   
Sbjct: 121 VGFGL--------KPVLIALVLYGLLPIFESTIAGIEDVPRDVVDAARGMGMSGWQQLKS 172

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +V  + ++       VV +       + +   G+G  I   ++  +   +L
Sbjct: 173 VELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTANTAFVL 225

Query: 243 YAMLTMLGVIFLYDQLL 259
              + +  +  L    +
Sbjct: 226 QGGMIVGLLAVLVSDAI 242



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V    +I +++ I  GI +  RP  +  +   +    +   FP  
Sbjct: 53  DRASLLDLTLAHLGTVAASSLIGTLLAIAAGIAV-TRPWGADFLPVARSVVNIGQTFPPV 111

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  + A    ++GW
Sbjct: 112 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGIEDVPRDVVDAARGMGMSGW 167

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +  + + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 168 QQLKSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTAN 220

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 221 TAFVLQGGMIVGLLAVLV 238


>gi|159043458|ref|YP_001532252.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911218|gb|ABV92651.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 244

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 14/237 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F+L+I    + L G+    +P           +   +  +   T   ++  ++I      
Sbjct: 12  FLLMIWQGIVSLTGVASFILPGPARVWTAFWENRGLIADHGLVTLTEVVLGLLIGGGLGV 71

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A   A S    ++L P+L   Q++P+        ++       KV  A L   F    
Sbjct: 72  ITALTLAISPAARVLLRPMLVFSQALPVFALAPILTLWLGYGLGSKVAMAVLIIYF---- 127

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
                +T + +  L  +P    +++R+   +     W + VP ++P L     ++     
Sbjct: 128 ----PVTSAFFDGLMRVPPGYLDLARTMGATQRTILWRIQVPNALPSLGSGFKLA----- 178

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             V A    V+G+ V    G+G  + LA        +  AML +  +  L   L  R
Sbjct: 179 -AVYAPIGAVIGEWVGSSQGLGYLMLLANGRAKTDLMFAAMLALGVMSVLLYVLADR 234



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 79/241 (32%), Gaps = 10/241 (4%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++L      +  L + W  +V    +          V    +++   +   G +T+  VV
Sbjct: 1   MKLSHGLAATTFLLMIWQGIVSLTGVASFILPGPARVWTAFWENRGLIADHGLVTLTEVV 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + ++I   + +   + +   P     ++P      A P     P++   + Y   +    
Sbjct: 61  LGLLIGGGLGVITALTLAISPAARVLLRPMLVFSQALPVFALAPILTLWLGYGLGSKVAM 120

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++ F     +      G    P  + ++A +   T       I +P   P   +G  
Sbjct: 121 AVLIIYF----PVTSAFFDGLMRVPPGYLDLARTMGATQRTILWRIQVPNALPSLGSGFK 176

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            A   A   +++ E          + GLG  +  +  +     +   +L +    + L  
Sbjct: 177 LAAVYAPIGAVIGEWVG------SSQGLGYLMLLANGRAKTDLMFAAMLALGVMSVLLYV 230

Query: 572 F 572
            
Sbjct: 231 L 231


>gi|254464397|ref|ZP_05077808.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206685305|gb|EDZ45787.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 305

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         +        SL  +A  T    L    I      + A     SR 
Sbjct: 76  LPAPHQVAAELWETTVEKKITSKRSLIYHAQVTLSATLLGFAIGTGLGILLAVGIVHSRV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P   + Q+IPI+      +V   ++    +I   + + +  F    + +   M 
Sbjct: 136 MDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGIIPKAVISAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L        ++ +++  +  Q FW L +P SMP L  ++ + ++      +  E+   
Sbjct: 192 KGLRAPDAMQLDLLKTYSANTSQGFWKLRLPSSMPYLFASLKIGIAASLVGAIVGEL--- 248

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 249 --PTGAVAGLGARLLAGSYYGQTVQIW 273



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 68/179 (37%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   +T+   ++   I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHAQVTLSATLLGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  + + + ++  ++ G  A      ++  ++     + +  +
Sbjct: 160 IVVLYSIGVQGIIPKAVISAYLSFFPVVVGMVKGLRAPDAMQLDLLKTYSANTSQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPSSMPYLFASLKIGIAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|134292170|ref|YP_001115906.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134135327|gb|ABO56441.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 260

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + +I  L          +        V   + DI Q+ 
Sbjct: 55  PVIYDRASLLDLTLAHLGTVALSSLIGTLVAVAAGIAVTRPWGADFLPVARSVADIGQTF 114

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V                  + A+    +  +  S    + ++PRD+ E +R
Sbjct: 115 PPVAVLALAVPAVGFGL--------KPVLIALVLYGLLPIFESTIAGIEDVPRDIVEAAR 166

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++GWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 167 GMGMNGWQQLVSIELPLAFPVIVNGVRLA-------VVINLGTATIGSTVAARGLGDVII 219

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++  +   +L   + +  +  L    +
Sbjct: 220 AGLQTSNTAFVLQGGVIVGLLAVLVSDAI 248



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +++ +  GI +  RP  +  +   +  A +   FP  
Sbjct: 59  DRASLLDLTLAHLGTVALSSLIGTLVAVAAGIAV-TRPWGADFLPVARSVADIGQTFPPV 117

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      I  + IAG    P D  E A    + GW
Sbjct: 118 AVLALAVPAVGFGLKPVLIALVLYGLL----PIFESTIAGIEDVPRDIVEAARGMGMNGW 173

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    I LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 174 QQLVSIELPLAFPVIVNGVRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 226

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 227 TAFVLQGGVIVGLLAVLV 244


>gi|219848219|ref|YP_002462652.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
 gi|219542478|gb|ACL24216.1| binding-protein-dependent transport systems inner membrane
           component [Chloroflexus aggregans DSM 9485]
          Length = 254

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 12/207 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W     G+   +       I+     +  + + +    T    ++ + + ++I   V + 
Sbjct: 27  WGLPAAGIPAYLLPPPSRVIIAALQPE--VRLAYHTIATAGAALLGLAVGTLISFIVAVA 84

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             F   +   + P+  L  + P+    PL+   +           +L       + +L  
Sbjct: 85  FLFSRPLEDALYPWVLLGQSLPSVALAPLLTIWLGEGLAPRAAMAALF----AGFPLLIA 140

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I+G      +   +  ++  + W+  R + LP   P+  +G   A   A   ++VSE+A
Sbjct: 141 TISGLRRPAPEQLAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAGALAVIGALVSELA 200

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPE 554
             G       GLG  I  ST + +   
Sbjct: 201 GAG------RGLGYLITTSTYRLATDR 221



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 14/175 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L  +   T    L  + +  L +F+ A     SR L   L P + + QS+P +       
Sbjct: 56  LAYHTIATAGAALLGLAVGTLISFIVAVAFLFSRPLEDALYPWVLLGQSLPSVALAPLLT 115

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       +   A L A F         +  +    L     +   + +++  S WQ  
Sbjct: 116 IWLGEGLAPRAAMAALFAGF--------PLLIATISGLRRPAPEQLAMMQAYGASQWQIL 167

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             L +P ++P +   + ++ +      + SE+   G       G+G  I  +   
Sbjct: 168 RMLRLPAALPFIFSGLRVAGALAVIGALVSELAGAG------RGLGYLITTSTYR 216


>gi|168210074|ref|ZP_02635699.1| ABC transporter, permease protein [Clostridium perfringens B str.
           ATCC 3626]
 gi|170711891|gb|EDT24073.1| ABC transporter, permease protein [Clostridium perfringens B str.
           ATCC 3626]
          Length = 251

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 89/221 (40%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P      +   +  +   +    T  R   + +++L+ 
Sbjct: 17  VILFILWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFFKIIISTLGRTFISFILALVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A ++ +   ++PIL++M+S+P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + +        + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKVYEIGMGNLIKNIYLPSISFAICRIMVSTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 12/181 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              +   T+ R  +  I+A +I + +G++  F  ++ + + P   ++ + P   F  L +
Sbjct: 55  FFKIIISTLGRTFISFILALVIALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYI 497
             +S           +L+ F   + I ++ I GA      +  E+A  + I      + I
Sbjct: 115 IWLSQG------IAPILVGFVMSFPIFYDAIIGAILNIDKNILEMAKVYEIGMGNLIKNI 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP I        ++         +  EV           G+G  +       +   V  
Sbjct: 169 YLPSISFAICRIMVSTFSLTMKLVVGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFA 223

Query: 558 G 558
            
Sbjct: 224 W 224


>gi|160899959|ref|YP_001565541.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160365543|gb|ABX37156.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|222834255|gb|EEE72732.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I   +   L       +   T   +L  +        +     A+S  L  VL 
Sbjct: 37  LPAPSAIAASLWTGLATGYFWPHIRATLQALLLGLAAGSAIGLLAGMALAESELLERVLK 96

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q +P L      V++F       V+   L   F         +  +    L  +
Sbjct: 97  PYVVVSQVVPKLALAPLFVLWFGFGMLPTVLITALICFF--------PLMENTLTGLRQV 148

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                ++ R    +  Q    L +P  +P ++  + +++       V +E +        
Sbjct: 149 DAQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAVVLALVGAVVAEFMGAS----- 203

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G+ +  A    D   +  A++ +  +  L  Q
Sbjct: 204 -RGLGAVVIAAQGMMDTTLMFAALVLIAAMGLLLYQ 238



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 10/170 (5%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +  G+ +     +   ++P+  +    P     PL V    +      L   L+    
Sbjct: 77  IGLLAGMALAESELLERVLKPYVVVSQVVPKLALAPLFVLWFGFG----MLPTVLITALI 132

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             + ++ N + G         ++      T  +    + LP   P  + G   A   A  
Sbjct: 133 CFFPLMENTLTGLRQVDAQRLQLFRMLGATRLQTLLRLKLPTGLPAILAGLRVAVVLALV 192

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++V+E          + GLGA +  +        +   ++++    L L
Sbjct: 193 GAVVAEFMG------ASRGLGAVVIAAQGMMDTTLMFAALVLIAAMGLLL 236


>gi|298501714|ref|YP_003723654.1| hydroxymethylpyrimidine ABC superfamily transporter membrane
           protein [Streptococcus pneumoniae TCH8431/19A]
 gi|298237309|gb|ADI68440.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 238

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
             L  + +  +   L   + +  +P  +  + P   D   L  ++  T    L  +++ +
Sbjct: 2   GFLGVLSIWQLAGFLKL-LPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV 60

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L   + A L      L  ++ P++ ++ +IP +      V++             L  I 
Sbjct: 61  LIACLMAVLMDSLTWLNDLIYPMMVVIPTIPTIAIAPILVLWLGYGI--------LPKIV 112

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            I  +  + +  S+     +  +D+  +    R   WQ  W+  +P S+P     + +S+
Sbjct: 113 LIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSV 172

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           S  +   V SE +          G+G Y+  +
Sbjct: 173 SYAFITTVVSEWLGG------FEGLGVYMIQS 198



 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + + +     ++  I P   ++   P     P++V  + Y      L   +L+I  T + 
Sbjct: 66  MAVLMDSLTWLNDLIYPMMVVIPTIPTIAIAPILVLWLGYG----ILPKIVLIILTTTFP 121

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +++ G      D   + S      W+   +  +P   PY+  G   +   A+  ++V
Sbjct: 122 IIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVV 181

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           SE            GLG Y+ +S +   +  +  
Sbjct: 182 SEWLGGFE------GLGVYMIQSKKLFQYDTMFA 209


>gi|149203257|ref|ZP_01880227.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius sp. TM1035]
 gi|149143090|gb|EDM31129.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius sp. TM1035]
          Length = 291

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 9/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL  ++  T        V+        A     +R + M ++P +   Q+IPIL 
Sbjct: 82  GFSKRSLFYHSWITFSATALGFVLGTALGVALAIGIVYNRTMDMSVMPWVIASQTIPILA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +V    +    ++   + +++  F    + +   M + L +      +  R++  
Sbjct: 142 IAPMIIVVLNAVGISGLLPKAMISMYLSF----FPVVVGMVKGLRSPTPMQLDQMRTWNA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q FW L +P SMP L  ++ + M+      +  E+         + G+G+ +     
Sbjct: 198 SASQTFWRLRLPSSMPYLFTSLKVGMAASLVGAIVGEL-----PTGAVAGLGARLLAGSY 252

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
               + I  A++    +  +   L+
Sbjct: 253 YGQTIQIWSALIMAATLAAVLVGLI 277



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 83/219 (37%), Gaps = 8/219 (3%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W + G +V          + +   IT     +  ++ + + + + I I +   +   + 
Sbjct: 69  IWNTTGAMVLEGRGFSKRSLFYHSWITFSATALGFVLGTALGVALAIGIVYNRTMDMSVM 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P+       P     P+++  ++   ++  L  +++ ++ + + ++  ++ G  +     
Sbjct: 129 PWVIASQTIPILAIAPMIIVVLNAVGISGLLPKAMISMYLSFFPVVVGMVKGLRSPTPMQ 188

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   +++ +  + +  + LP   PY  T        +   +IV E+ +         GL
Sbjct: 189 LDQMRTWNASASQTFWRLRLPSSMPYLFTSLKVGMAASLVGAIVGELPTGA-----VAGL 243

Query: 540 GAYIAESTEKGSFPEVVLGVLI---MCCFVLALNRFLWH 575
           GA +   +  G   ++   +++   +   ++ L   +  
Sbjct: 244 GARLLAGSYYGQTIQIWSALIMAATLAAVLVGLIGLIQR 282


>gi|293397086|ref|ZP_06641360.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
 gi|291420557|gb|EFE93812.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
          Length = 386

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 15/189 (7%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV-------YFMNLYPGKV 131
           +L        L  +S+R    +   L+I+Q++P +      +         F  L    +
Sbjct: 193 TLAIGTPLGVLCYRSQRWQTPIFSTLNIIQTVPSIALFGLLIAPLAGLAAAFPWLAQHGI 252

Query: 132 IGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            G  LA AI A+    +  +  S+   L ++P ++ E +    ++  Q F  + +P ++P
Sbjct: 253 NGIGLAPAIVALVMYALLPLVRSVVAGLQSVPANVIESALGMGMTRGQIFLRIQLPLALP 312

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  + +         V + +I  G       G G+ +   +    L  +L  ++ ++ 
Sbjct: 313 LFLTGVRILAVQTVGMAVVAALIGAG-------GFGAIVFQGLLSSALDLVLLGVIPVIA 365

Query: 251 VIFLYDQLL 259
           +  + D L 
Sbjct: 366 MAVMVDSLF 374



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 19/193 (9%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++    I  P+G+         + I     ++   P+   F L+++ ++          
Sbjct: 189 TVLPTLAIGTPLGVLCYRSQRWQTPIFSTLNIIQTVPSIALFGLLIAPLAGLAAAFPWLA 248

Query: 453 ------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                        + ++      ++ +V+AG  + P +  E A    +T  + +  I LP
Sbjct: 249 QHGINGIGLAPAIVALVMYALLPLVRSVVAGLQSVPANVIESALGMGMTRGQIFLRIQLP 308

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P ++TG           ++V+ +   G       G GA + +     +   V+LGV+
Sbjct: 309 LALPLFLTGVRILAVQTVGMAVVAALIGAG-------GFGAIVFQGLLSSALDLVLLGVI 361

Query: 561 IMCCFVLALNRFL 573
            +    + ++   
Sbjct: 362 PVIAMAVMVDSLF 374


>gi|221201784|ref|ZP_03574821.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
 gi|221178204|gb|EEE10614.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M]
          Length = 282

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 253 MIVLAVVALAADYLL 267



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 256 LAVVALAADYLLTWVEKRLLKW 277


>gi|85375187|ref|YP_459249.1| ABC transporter permease protein [Erythrobacter litoralis HTCC2594]
 gi|84788270|gb|ABC64452.1| ABC transporter permease protein [Erythrobacter litoralis HTCC2594]
          Length = 517

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG----F 115
            L    +   L   SA+ + ++     A  A+++  +  + +    ++Q+IP L     F
Sbjct: 10  GLGDKLAAHVLLAASAIALGIVVALPLAVWASRNTTVARITLGFASLVQTIPALALLALF 69

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +        G      L A+ A+    +  +  +   +  N+   + E +    +S
Sbjct: 70  FPILLSLRAIFGEGLPTLGFLPALLALALYALLPILRNAVTARDNMAPGVLEAADGVGMS 129

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQK   +  P + P ++  +  +    W  + A+ +     T I  P +G  I   ++ 
Sbjct: 130 KWQKLRLVEAPLAAPYVMAGIRTA--SVW-TIGAATL----STTIGQPSLGDPIFAGLQT 182

Query: 236 QDLLAILYAML 246
           Q+   +L   L
Sbjct: 183 QNWSLVLAGCL 193



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 15/196 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           ++ +L +       +      I +  ++ +P+ +W      ++     FA L+   PA  
Sbjct: 5   WETMLGLGDKLAAHVLLAASAIALGIVVALPLAVWASRNTTVARITLGFASLVQTIPALA 64

Query: 433 ----FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF----NVIAGASAFPNDFKEVAS 484
               FFP+++S  + +         L  +     Y L     N +           E A 
Sbjct: 65  LLALFFPILLSLRAIFGEGLPTLGFLPALLALALYALLPILRNAVTARDNMAPGVLEAAD 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              ++ W+  R +  P   PY + G  TA      A+ +S         +    LG  I 
Sbjct: 125 GVGMSKWQKLRLVEAPLAAPYVMAGIRTASVWTIGAATLS-------TTIGQPSLGDPIF 177

Query: 545 ESTEKGSFPEVVLGVL 560
              +  ++  V+ G L
Sbjct: 178 AGLQTQNWSLVLAGCL 193


>gi|322411866|gb|EFY02774.1| putative phosphate ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 311

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 MRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|229020026|ref|ZP_04176810.1| ABC transporter permease protein [Bacillus cereus AH1273]
 gi|229026257|ref|ZP_04182616.1| ABC transporter permease protein [Bacillus cereus AH1272]
 gi|228734973|gb|EEL85609.1| ABC transporter permease protein [Bacillus cereus AH1272]
 gi|228741248|gb|EEL91462.1| ABC transporter permease protein [Bacillus cereus AH1273]
          Length = 167

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIA 470
           P ++  + P+  +L A P     P+++         PN+  S+ M +  +    +  + +
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYS 56

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                 +++ +V  +F    W+ + ++ILP  FP  ++      G +W   I  E+    
Sbjct: 57  AFQEVDSNYIKVMDTFGANKWQCYTHVILPSSFPAIISTLKVNVGLSWVGVIFGELL--- 113

Query: 531 HIHLRTTGLGAYIAESTEKGSF 552
              +   GLG  I+   +  +F
Sbjct: 114 ---VSKQGLGYLISYGFQVFNF 132



 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 65/166 (39%), Gaps = 14/166 (8%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
             L  VL P L ++ ++P +      +V F       +    + +I              
Sbjct: 2   PLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV-------- 53

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +Y +   +  +  +V  +F  + WQ + ++ +P S P ++  + +++   W  V+  E++
Sbjct: 54  IYSAFQEVDSNYIKVMDTFGANKWQCYTHVILPSSFPAIISTLKVNVGLSWVGVIFGELL 113

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           V         G+G  I+   +  +   +L ++L    +  L    +
Sbjct: 114 V------SKQGLGYLISYGFQVFNFTLVLLSVLLTCVLATLMYVFV 153


>gi|221214545|ref|ZP_03587515.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
 gi|221165435|gb|EED97911.1| ABC transporter, permease protein [Burkholderia multivorans CGD1]
          Length = 282

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 83  LLTQVWVTLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 142

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 143 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTAVV 198

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 199 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 252

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 253 MIVLAVVALAADYLL 267



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 90  TLEETAIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 149

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 150 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTAVVIPS 201

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 202 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 255

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 256 LAVVALAADYLLTWIEKRLLKW 277


>gi|326329326|ref|ZP_08195651.1| proline/glycine betaine ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325952901|gb|EGD44916.1| proline/glycine betaine ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 235

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 73/204 (35%), Gaps = 15/204 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
             +   PQ           ++VI+ +  F    L   + R  ++ + + +  +++P LG 
Sbjct: 15  TSLDGFPQRILEHLGYTFLSLVIAAVIAFPIGLLIGHTGRGALIAINLGNAGRALPTLGV 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   +               +    A+    +  +  + Y  +  +  +  + +R   ++
Sbjct: 75  LMLALGLVGIGL--------VPVTIALVVLAIPPILATTYAGIRAVADETVDAARGVGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q  W + VP ++P ++  +          VV++  I        L G+G Y+   +  
Sbjct: 127 ESQIAWRVEVPIALPIIIGGLR----NASLQVVSTATIAA---YAGLGGLGRYLFDGLAT 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                ++   + +  +  L D +L
Sbjct: 180 LQYDQVVAGAIVLAVLAVLIDLVL 203



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA++I  P+G+ IG     +           A P      L +  V    +   +
Sbjct: 32  FLSLVIAAVIAFPIGLLIGHTGRGALIAINLGNAGRALPTLGVLMLALGLVGIGLVPVTI 91

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L I      IL    AG  A  ++  + A    +T  +    + +P   P  + G 
Sbjct: 92  ALVVLAIP----PILATTYAGIRAVADETVDAARGVGMTESQIAWRVEVPIALPIIIGGL 147

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A     + + ++  A  G       GLG Y+ +      + +VV G +++    + ++
Sbjct: 148 RNASLQVVSTATIAAYAGLG-------GLGRYLFDGLATLQYDQVVAGAIVLAVLAVLID 200

Query: 571 RFL 573
             L
Sbjct: 201 LVL 203


>gi|282866352|ref|ZP_06275397.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282558748|gb|EFB64305.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 232

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 69/175 (39%), Gaps = 15/175 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L     +       ++VI LL  F  A LA + R     ++ +  ++ ++P L   + 
Sbjct: 23  HELTDAVVQHIWITAISVVIGLLVAFPLALLARRGRHFAGPVLGLTTVLYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P++  E ++       +
Sbjct: 83  LLPLFGL--------SAALVVTGLVLYSLTILVRNILAGLEAVPQEAREAAKGMGYGPAR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
             W + +P ++P L+  + ++        V++  +    +++   G+G+ I  A+
Sbjct: 135 LLWEVELPLALPALMAGLRIA-------TVSTVALTTVGSLVGKGGLGNLIEDAL 182



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 11/160 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + ++I  ++  P+ +      H +  +     +L   P+   F L++        
Sbjct: 33  IWITAISVVIGLLVAFPLALLARRGRHFAGPVLGLTTVLYTVPSLAMFSLLLPLFGLSAA 92

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG  A P + +E A        R    + LP   P  
Sbjct: 93  LVVTGLVLYSLTI----LVRNILAGLEAVPQEAREAAKGMGYGPARLLWEVELPLALPAL 148

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           + G   A       ++ +   +     +   GLG  I ++
Sbjct: 149 MAGLRIA-------TVSTVALTTVGSLVGKGGLGNLIEDA 181


>gi|228903295|ref|ZP_04067426.1| ABC transporter permease protein [Bacillus thuringiensis IBL 4222]
 gi|228910641|ref|ZP_04074453.1| ABC transporter permease protein [Bacillus thuringiensis IBL 200]
 gi|228955066|ref|ZP_04117081.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961059|ref|ZP_04122686.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228967898|ref|ZP_04128909.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|229072291|ref|ZP_04205496.1| ABC transporter permease protein [Bacillus cereus F65185]
 gi|229082041|ref|ZP_04214529.1| ABC transporter permease protein [Bacillus cereus Rock4-2]
 gi|229112249|ref|ZP_04241789.1| ABC transporter permease protein [Bacillus cereus Rock1-15]
 gi|229130064|ref|ZP_04259026.1| ABC transporter permease protein [Bacillus cereus BDRD-Cer4]
 gi|229147356|ref|ZP_04275705.1| ABC transporter permease protein [Bacillus cereus BDRD-ST24]
 gi|229152990|ref|ZP_04281171.1| ABC transporter permease protein [Bacillus cereus m1550]
 gi|229181107|ref|ZP_04308439.1| ABC transporter permease protein [Bacillus cereus 172560W]
 gi|228602298|gb|EEK59787.1| ABC transporter permease protein [Bacillus cereus 172560W]
 gi|228630410|gb|EEK87058.1| ABC transporter permease protein [Bacillus cereus m1550]
 gi|228636038|gb|EEK92519.1| ABC transporter permease protein [Bacillus cereus BDRD-ST24]
 gi|228653381|gb|EEL09257.1| ABC transporter permease protein [Bacillus cereus BDRD-Cer4]
 gi|228671233|gb|EEL26537.1| ABC transporter permease protein [Bacillus cereus Rock1-15]
 gi|228701266|gb|EEL53764.1| ABC transporter permease protein [Bacillus cereus Rock4-2]
 gi|228710828|gb|EEL62798.1| ABC transporter permease protein [Bacillus cereus F65185]
 gi|228791765|gb|EEM39356.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228798604|gb|EEM45590.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804576|gb|EEM51180.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228849056|gb|EEM93898.1| ABC transporter permease protein [Bacillus thuringiensis IBL 200]
 gi|228856256|gb|EEN00785.1| ABC transporter permease protein [Bacillus thuringiensis IBL 4222]
          Length = 191

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 69/162 (42%), Gaps = 12/162 (7%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++         PN+ 
Sbjct: 6   VGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNIS 60

Query: 452 LSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP  ++  
Sbjct: 61  SSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFPAIISTL 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 121 KVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 156



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 71/191 (37%), Gaps = 14/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L      ++  +   + AT       L  VL P L ++ ++P +      +V F     
Sbjct: 1   MLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNIS 60

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    + +I              +Y +   +  +  +V  +F  + WQ +  + +P S
Sbjct: 61  SSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPAS 112

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  + +++   W  V+  E++V         G+G  I+   +  +   +L ++L  
Sbjct: 113 FPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLVLLSVLLT 166

Query: 249 LGVIFLYDQLL 259
             +  L    +
Sbjct: 167 CVLATLMYVFV 177


>gi|94994500|ref|YP_602598.1| phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10750]
 gi|139473687|ref|YP_001128403.1| phosphate ABC transporter permease [Streptococcus pyogenes str.
           Manfredo]
 gi|94548008|gb|ABF38054.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10750]
 gi|134271934|emb|CAM30172.1| putative phosphate ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 311

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 MRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|83720884|ref|YP_440597.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|83654709|gb|ABC38772.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 259

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+   +   +I S+  I  GI +G    ++     + Q+  + P  V   + V
Sbjct: 60  LLLQVWVTLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFV 119

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 120 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 175

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 176 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 229

Query: 559 VLIMCCFVLALNRFLWH 575
           ++++    LA +  L  
Sbjct: 230 MIVLAVVALAADFLLTR 246



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 75/194 (38%), Gaps = 14/194 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    ++  +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 67  TLEETIAGFLIGSVAGIFCGIVLGRNKLLADVFGLYIQIANSIPRVVLGSIFVIALGLGM 126

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 127 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 178

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 179 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 232

Query: 248 MLGVIFLYDQLLFR 261
           +  V    D LL R
Sbjct: 233 LAVVALAADFLLTR 246


>gi|315650581|ref|ZP_07903645.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
 gi|315487145|gb|EFU77463.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
          Length = 250

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 95/237 (40%), Gaps = 14/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L  +L      I+L+     + P +++  +      +       R+  ++L   +    
Sbjct: 12  VLLALLFWQTAAIILNRSFLLSSPVEVLKALLELGLSNIFWTGMWRSVCKILLGFLTGAG 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
               +A L+ +     + + P + +++SIP+  F+   +++         +G E  ++F 
Sbjct: 72  VGIFFAGLSYRFNLFEVYISPYIMVIRSIPVASFVIIILIW---------LGGEGLSLFV 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F   +     +  + L ++   + ++++ F L    K  Y+ +P     L+ + + SM 
Sbjct: 123 CFFMVMPIFYANTLEGLKSVDMKMIQMAKIFELGKKAKLIYIYLPMLESFLISSSVASMG 182

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +   +A+E+I      +     G  +  A    D   +    LT++    ++++L
Sbjct: 183 IAFKSGIAAEVIGRPKDTV-----GFLLFDAKMYLDTSKVFAITLTVIICSAIFERL 234



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 79/232 (34%), Gaps = 13/232 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           +  +FW      +       S   ++       +  + W G   ++ ++++  +  + + 
Sbjct: 14  LALLFWQTAAIILNRSFLLSSPVEVLKALLELGLSNIFWTGMWRSVCKILLGFLTGAGVG 73

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I               I P+  ++ + P   F  +++  +    L      SL + F   
Sbjct: 74  IFFAGLSYRFNLFEVYISPYIMVIRSIPVASFVIIILIWLGGEGL------SLFVCFFMV 127

Query: 462 WYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             I + N + G  +      ++A  F +       YI LP +  + ++ ++ + G A+ +
Sbjct: 128 MPIFYANTLEGLKSVDMKMIQMAKIFELGKKAKLIYIYLPMLESFLISSSVASMGIAFKS 187

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            I +EV       +     G  + ++       +V    L +        R 
Sbjct: 188 GIAAEVIGRPKDTV-----GFLLFDAKMYLDTSKVFAITLTVIICSAIFERL 234


>gi|311898306|dbj|BAJ30714.1| putative chitobiose ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 307

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 6/194 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           T +  L A+V+ +   F+ A   A+ + R     +  + ++Q +P++  L      F+ +
Sbjct: 102 TLILTLGAVVLGVAVGFLAAVAVARFNFRGRSFFIVTMLVVQMVPLMAILIP---LFVVM 158

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               + G+ +  I A     V  + +++   + NIP +L+E +     + W  F+ + +P
Sbjct: 159 NSAGMTGSLVGVILAYLVFTVPYVIWTLRSFIVNIPAELDEAAMVDGCTQWGAFFRVILP 218

Query: 187 FSMPGLVWNMMMSMSGGWF-FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            ++PGLV   + S    W  FVVAS ++    T   +  +  Y +   +  D  + +   
Sbjct: 219 LTLPGLVTTAVYSWIQAWNEFVVASTLLNTAGTKTSMIWLTFYSSTPTRAADYGSQMAGG 278

Query: 246 LTMLG-VIFLYDQL 258
           L +   VI L+   
Sbjct: 279 LLVSLPVIILFVFF 292



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 5/192 (2%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV-FFPLVVSCVS 442
            +T+  VV+ + +  +  + V  +               Q+    P      PL V   S
Sbjct: 104 ILTLGAVVLGVAVGFLAAVAVARFNFRGRSFFIVTMLVVQM---VPLMAILIPLFVVMNS 160

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  + + L  +  T  Y+++ + +     P +  E A     T W  +  +ILP  
Sbjct: 161 AGMTGSLVGVILAYLVFTVPYVIWTLRSFIVNIPAELDEAAMVDGCTQWGAFFRVILPLT 220

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P  VT A+ +   AWN   + S + +          L  Y +  T    +   + G L+
Sbjct: 221 LPGLVTTAVYSWIQAWNEFVVASTLLNTAGTKTSMIWLTFYSSTPTRAADYGSQMAGGLL 280

Query: 562 MCCFVLALNRFL 573
           +   V+ L  F 
Sbjct: 281 VSLPVIILFVFF 292


>gi|295700315|ref|YP_003608208.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia sp. CCGE1002]
 gi|295439528|gb|ADG18697.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 287

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q + + VN  +   +L  +W   +T+    +  II S+  I  GI +G    +S     +
Sbjct: 74  QIVDWFVNGTSQGPLLTQVW---VTLEETGLGFIIGSVAGIVCGIVLGRNKLLSDVFSLY 130

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            ++  + P  V   + V  +     +      +++ F        N   G          
Sbjct: 131 IKIANSIPRVVLGSVFVIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIA 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A     +  +    +++P    + +     + G A   ++V E            G+G 
Sbjct: 187 NAQILGASRRQVTTSVVIPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGL 240

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I+ +    +   V   ++++    LA +  L
Sbjct: 241 LISTAQGAFNASGVFAAMIVLAVVALAADYLL 272



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   V   +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGIVCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL 259
           +  V    D LL
Sbjct: 261 LAVVALAADYLL 272


>gi|225389905|ref|ZP_03759629.1| hypothetical protein CLOSTASPAR_03654 [Clostridium asparagiforme
           DSM 15981]
 gi|225044035|gb|EEG54281.1| hypothetical protein CLOSTASPAR_03654 [Clostridium asparagiforme
           DSM 15981]
          Length = 221

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 10/154 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDI 106
              ++ L +   +T   +  + +IS L           +             VL   +++
Sbjct: 5   ATTINMLKEGTMQTIYMVFMSSLISYLIGIPLGIALMVTDKDGIRPVPLFNKVLGLAINL 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P L  +   V+ F  L  GK+IG   AA+  +  +    +   +  SL  +   + 
Sbjct: 65  LRSVPFLILM-IMVIPFTRLVVGKIIGPN-AAVVPLIIAAAPYIGRMVESSLKEVDAGVV 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           E ++S   S WQ  W + +P + P L+    +S+
Sbjct: 123 EAAQSMGASTWQIIWKVLLPEAKPSLLVGAAISI 156



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  +I+ +I IP+GI +      G RP    +  +     LL + P  +   +V
Sbjct: 18  TIYMVFMSSLISYLIGIPLGIALMVTDKDGIRPVPLFNKVLGLAINLLRSVPFLILMIMV 77

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     V    + PN  +  L+I     YI   V +          E A S   + W+  
Sbjct: 78  IPFTRLVVGKIIGPNAAVVPLII-AAAPYIGRMVESSLKEVDAGVVEAAQSMGASTWQII 136

Query: 495 RYIILPGIFPYYVTGAITAC 514
             ++LP   P  + GA  + 
Sbjct: 137 WKVLLPEAKPSLLVGAAISI 156


>gi|159043931|ref|YP_001532725.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911691|gb|ABV93124.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 285

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 80/199 (40%), Gaps = 10/199 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L + +  T    + A++++++     A L  +S+ + M   P   I+Q  P++   
Sbjct: 73  DWGILYEASLLTARTTILALLLAVIGGAGLAILFNQSKMVEMSFYPYAVILQVTPVVSIA 132

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +Y  +   G ++ A + A F + +        S    L ++  +L ++ R +  + 
Sbjct: 133 PLIFIYVDSKTAGMLLCAWIVAFFPVLS--------STTLGLNSVDHNLRDLFRIYGATR 184

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQK W L +P ++P  +  + ++        V +E++     V       + I  A    
Sbjct: 185 WQKLWMLQLPSALPYFLGGLKIAGGLSLIGAVVAELVAGTGGVGAGL--AARIQEAGYRL 242

Query: 237 DLLAILYAMLTMLGVIFLY 255
           ++  +  A+  +  +    
Sbjct: 243 NIARMFAALSLVAAMGVFI 261



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 84/249 (33%), Gaps = 6/249 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R    E   +      V  +    W  +V    I          V      D   + 
Sbjct: 19  ARLRARRIERIGKWSLPVIVMALGIFLWDRIVVWNEIPHYILPGPGRVLDTLIADWGILY 78

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T    ++ +++A I    + I       +     P+A +L   P     PL+   
Sbjct: 79  EASLLTARTTILALLLAVIGGAGLAILFNQSKMVEMSFYPYAVILQVTPVVSIAPLIFIY 138

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V        L   ++      + +L +   G ++  ++ +++   +  T W+    + LP
Sbjct: 139 VDSKTAGMLLCAWIV----AFFPVLSSTTLGLNSVDHNLRDLFRIYGATRWQKLWMLQLP 194

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              PY++ G   A G +   ++V+E+ +            A I E+  + +   +   + 
Sbjct: 195 SALPYFLGGLKIAGGLSLIGAVVAELVAGTGGVGAGL--AARIQEAGYRLNIARMFAALS 252

Query: 561 IMCCFVLAL 569
           ++    + +
Sbjct: 253 LVAAMGVFI 261


>gi|62289194|ref|YP_220987.1| ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|82699130|ref|YP_413704.1| binding-protein-dependent transporter inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189023465|ref|YP_001934233.1| ABC transporter, permease protein [Brucella abortus S19]
 gi|237814683|ref|ZP_04593681.1| ABC transporter, permease protein [Brucella abortus str. 2308 A]
 gi|254690517|ref|ZP_05153771.1| ABC transporter, permease protein [Brucella abortus bv. 6 str. 870]
 gi|254695006|ref|ZP_05156834.1| ABC transporter, permease protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696642|ref|ZP_05158470.1| ABC transporter, permease protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731550|ref|ZP_05190128.1| ABC transporter, permease protein [Brucella abortus bv. 4 str. 292]
 gi|256258774|ref|ZP_05464310.1| ABC transporter, permease protein [Brucella abortus bv. 9 str. C68]
 gi|260546489|ref|ZP_05822229.1| ABC transporter [Brucella abortus NCTC 8038]
 gi|260756076|ref|ZP_05868424.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260759300|ref|ZP_05871648.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260761022|ref|ZP_05873365.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260885098|ref|ZP_05896712.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261215351|ref|ZP_05929632.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|297247608|ref|ZP_06931326.1| osmoprotectant transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|62195326|gb|AAX73626.1| ABC transporter, permease protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615231|emb|CAJ10179.1| Binding-protein-dependent transport systems inner membrane
           component:Basic helix-loop-helix dimerization domain
           bHLH:Pollen a [Brucella melitensis biovar Abortus 2308]
 gi|189019037|gb|ACD71759.1| ABC transporter, permease protein [Brucella abortus S19]
 gi|237789520|gb|EEP63730.1| ABC transporter, permease protein [Brucella abortus str. 2308 A]
 gi|260096596|gb|EEW80472.1| ABC transporter [Brucella abortus NCTC 8038]
 gi|260669618|gb|EEX56558.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260671454|gb|EEX58275.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676184|gb|EEX63005.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260874626|gb|EEX81695.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|260916958|gb|EEX83819.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|297174777|gb|EFH34124.1| osmoprotectant transport system permease [Brucella abortus bv. 5
           str. B3196]
          Length = 248

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQS 109
            P+  D  +L     +    +  A   S L     A    + +      +   +++I Q+
Sbjct: 39  TPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQT 98

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P +  L   V  F           +   + A+F   +  +  +    L ++P  + E +
Sbjct: 99  FPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAA 150

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R   ++G Q+ + + +P +MP ++  + +S   G         +           +G  I
Sbjct: 151 RGMGMTGMQRRFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVI 203

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
              +   +L  +L   L +  +  L 
Sbjct: 204 IAGLISNNLAFVLEGGLVVAALAILI 229



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANV 432
           D   ++ L    +  V +    +++I + + I++  R         +    +   FP   
Sbjct: 44  DRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRRQGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G ++ P    E A    +TG +
Sbjct: 104 VLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   +      A I    A+ G      T LG  I       + 
Sbjct: 160 RRFKVEMPLAMPVILAGIRLS------AVIGLATATIGSTVAAKT-LGEVIIAGLISNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G L++    + +
Sbjct: 213 AFVLEGGLVVAALAILI 229


>gi|310816122|ref|YP_003964086.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ketogulonicigenium vulgare Y25]
 gi|308754857|gb|ADO42786.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Ketogulonicigenium vulgare Y25]
          Length = 246

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 84/253 (33%), Gaps = 25/253 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--------LYVIWLGCITMFR 389
            R      I    V   + +G  W +         + D+        L+       T+  
Sbjct: 3   SRDVIYRIIAPLLVFGALYLGWEWVAQNLRSILPPFGDITAEFARRPLFYAVNLWATLSN 62

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
            ++     +   + + + + +   +   I P A LL   P     P ++    +      
Sbjct: 63  ALIGFAFGAGAAVILSVLMVYFGFLRMAIIPVALLLNVTPVVAISPALIVAFGF----NA 118

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   ++      + +L N +AG SA   +  ++  +   +    +  + LP    +   G
Sbjct: 119 IPHIIVASIAAFFPMLINAMAGLSAIDREAHDLFRALSASRTEIFLRLRLPSSLGHLFAG 178

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-------LIM 562
           A  +   A   S+VSE          + GLGA I  +T   +  ++   +       L++
Sbjct: 179 AKLSIISAMVGSVVSEFMG------TSKGLGATIVLATNFLNLSQMWAAIFISALTSLVL 232

Query: 563 CCFVLALNRFLWH 575
              V  + R +  
Sbjct: 233 VGIVTLIERLVIR 245



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            T    L           + + L      L M ++P+  ++   P++      +V F   
Sbjct: 58  ATLSNALIGFAFGAGAAVILSVLMVYFGFLRMAIIPVALLLNVTPVVAISPALIVAFGFN 117

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +I A +AA F         M  +    L  I R+  ++ R+   S  + F  L +P
Sbjct: 118 AIPHIIVASIAAFF--------PMLINAMAGLSAIDREAHDLFRALSASRTEIFLRLRLP 169

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+  L     +S+       V SE +          G+G+ I LA    +L  +  A+ 
Sbjct: 170 SSLGHLFAGAKLSIISAMVGSVVSEFMGTSK------GLGATIVLATNFLNLSQMWAAIF 223

Query: 247 TML---GVIFLYDQLLFRPMIVW 266
                  V+     L+ R +I W
Sbjct: 224 ISALTSLVLVGIVTLIERLVIRW 246


>gi|254509580|ref|ZP_05121647.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221533291|gb|EEE36279.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 305

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    +   VI      + A     SR + + ++P   + Q+IPI+  
Sbjct: 96  TSKRSLIYHGWVTLSATMLGFVIGTGLGILLAVGIVHSRVMDLSVMPWAIVSQTIPIIAL 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    +I   + + +  F    + +   M + L +      ++ R++  S
Sbjct: 156 APMIIVVLYSVGVQGIIPKAIISAYLSF----FPVVVGMVKGLRSPDVMQLDLLRTYSAS 211

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 212 RSQGFWKLRLPASMPYLFTSLKIGVAASLVGAIVGEL-----PTGAVAGLGARLLAGSYY 266

Query: 236 QDLLAIL 242
              + I 
Sbjct: 267 GQTVQIW 273



 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G +T+   ++  +I + + I + + I     +   + P+A +    P     P++
Sbjct: 100 SLIYHGWVTLSATMLGFVIGTGLGILLAVGIVHSRVMDLSVMPWAIVSQTIPIIALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +   +  +++  + + + ++  ++ G  +      ++  ++  +  + +  +
Sbjct: 160 IVVLYSVGVQGIIPKAIISAYLSFFPVVVGMVKGLRSPDVMQLDLLRTYSASRSQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY  T        +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 220 RLPASMPYLFTSLKIGVAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTVQIW 273


>gi|149204740|ref|ZP_01881704.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149141849|gb|EDM29901.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 218

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 11/182 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   V + I + I IP+G  +      S         + + P+       +  +    L
Sbjct: 25  LWMSAVAMSIGAAIAIPLGFLVAHSRRASFVAINIVGAIRSIPSLAILSAALPLLGIGFL 84

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L        +L N + G +       + A+   ++  +   +I LP      
Sbjct: 85  PSVVALIVL----AVPPMLLNTVVGVAEVDLTVTDAATGMGMSRLQIALHIELPLALGPI 140

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G   A       + ++     G       GLG +I+        P +++G + +    
Sbjct: 141 ISGVKIASIQVIGGAALASFVGGG-------GLGDFISTGIAIMDMPRLLVGAVPIALLA 193

Query: 567 LA 568
           +A
Sbjct: 194 IA 195



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +       AM I          L A SRR   V + I+  ++SIP L  L+  +      
Sbjct: 23  QHLWMSAVAMSIGAAIAIPLGFLVAHSRRASFVAINIVGAIRSIPSLAILSAALPLLGIG 82

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +        L ++ A+    V  M  +    +  +   + + +    +S  Q   ++ +P
Sbjct: 83  F--------LPSVVALIVLAVPPMLLNTVVGVAEVDLTVTDAATGMGMSRLQIALHIELP 134

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++  ++  + ++          +  +  G       G+G +I+  I   D+  +L   +
Sbjct: 135 LALGPIISGVKIASIQVIGGAALASFVGGG-------GLGDFISTGIAIMDMPRLLVGAV 187

Query: 247 TMLGVIFL 254
            +  +   
Sbjct: 188 PIALLAIA 195


>gi|21226398|ref|NP_632320.1| glycine betaine transport system, permease [Methanosarcina mazei
           Go1]
 gi|20904655|gb|AAM29992.1| Glycine betaine transport system, permease protein [Methanosarcina
           mazei Go1]
          Length = 220

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 15/200 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L             A+  S+L   V   L  ++++L   ++  L++++++P +  L
Sbjct: 18  NTQMLSLRTVEHLYMFFFALFFSILIGVVTGVLTYRNQKLAGPVLNSLNVVETVPDVALL 77

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F               I A     +  +    Y  L N+PR+  E++ +  L+ 
Sbjct: 78  VLLLPIFGIG--------AAPTIVASILYSILPIARDTYTGLSNVPREYIEIAEALGLTP 129

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +  + +  P S+P +   + +++      V    +I  G     L          I+  
Sbjct: 130 REVLFKVRFPLSLPLIAGGVRIAVVFTMGVVTLGGLIAAGGLGAAL-------QNGIQLY 182

Query: 237 DLLAILYAMLTMLGVIFLYD 256
           D+  IL     +  +  L D
Sbjct: 183 DMGTILVTGAWVGLLAVLLD 202



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 4/135 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     +  + +I +  G+       ++  +     ++   P      L++        
Sbjct: 30  LYMFFFALFFSILIGVVTGVLTYRNQKLAGPVLNSLNVVETVPDVALLVLLLPIFGIGAA 89

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +   L  I      I  +   G S  P ++ E+A +  +T       +  P   P  
Sbjct: 90  PTIVASILYSIL----PIARDTYTGLSNVPREYIEIAEALGLTPREVLFKVRFPLSLPLI 145

Query: 507 VTGAITACGGAWNAS 521
             G   A        
Sbjct: 146 AGGVRIAVVFTMGVV 160


>gi|83953426|ref|ZP_00962148.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sulfitobacter sp. NAS-14.1]
 gi|83842394|gb|EAP81562.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Sulfitobacter sp. NAS-14.1]
          Length = 288

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 9/207 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         ++       SL  ++  T    L    +  L   + A     +R 
Sbjct: 59  LPAPHQVASEIWDTTVMKKVTSKRSLVYHSWITLSATLLGFGMGTLLGVLLAVGIVFNRV 118

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M 
Sbjct: 119 MDMSVMPWVIASQTIPILAIAPMIIVVLNAVGVSGLLPKAMISMYLSF----FPVVVGMV 174

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +  +   +  R++  S  Q FW L +P SMP    ++ ++M+      +  E+   
Sbjct: 175 KGLRSPDQMQLDQMRTWHASAGQTFWKLRLPASMPYFFTSLKIAMAASLVGAIIGEL--- 231

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL 242
                 + G+G+ +         + I 
Sbjct: 232 --PTGAVAGLGARLLAGSYYGQTIQIW 256



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 75/179 (41%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   IT+   ++   + +++ + + + I F   +   + P+       P     P++
Sbjct: 83  SLVYHSWITLSATLLGFGMGTLLGVLLAVGIVFNRVMDMSVMPWVIASQTIPILAIAPMI 142

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++ ++ + + ++  ++ G  +      +   ++H +  + +  +
Sbjct: 143 IVVLNAVGVSGLLPKAMISMYLSFFPVVVGMVKGLRSPDQMQLDQMRTWHASAGQTFWKL 202

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY+ T    A   +   +I+ E+ +         GLGA +   +  G   ++ 
Sbjct: 203 RLPASMPYFFTSLKIAMAASLVGAIIGELPTGA-----VAGLGARLLAGSYYGQTIQIW 256


>gi|256826382|ref|YP_003150342.1| proline/glycine betaine ABC transporter permease [Kytococcus
           sedentarius DSM 20547]
 gi|256689775|gb|ACV07577.1| ABC-type proline/glycine betaine transport system, permease
           component [Kytococcus sedentarius DSM 20547]
          Length = 214

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 15/213 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L +            ++I L        +AA+  RL   LV    ++ +IP L   
Sbjct: 8   EWSELWELGLAHVYLAGLPLLIGLALALPLGWVAARIPRLRTALVSGSALLYTIPSLALF 67

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                  +    G  I   L  + A+    V  +  ++   L  +P  + + + +  L  
Sbjct: 68  IL-----LPGIIGTQILDPLNVLIAMSLYTVALLVRNVADGLGAVPEHVRQAATAMGLGR 122

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W++   + +P ++P +   + ++        V++  IV    ++ +P +G          
Sbjct: 123 WRRLTRVELPLAVPVIAAGLRVA-------AVSNVSIVSVAALVGIPQLGILFTRGFNRD 175

Query: 237 DLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
           DL  I   M   + +  L+D    LL R +  W
Sbjct: 176 DLGMIAVGMAGCVLLALLFDAVILLLRRLLTPW 208



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 10/212 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++     +   +  LG   ++   + ++I   + +P+G      P + + +   + LL  
Sbjct: 1   MSEIGNVEWSELWELGLAHVYLAGLPLLIGLALALPLGWVAARIPRLRTALVSGSALLYT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F L+   +    L+P L + + M   T   ++ NV  G  A P   ++ A++  
Sbjct: 61  IPSLALFILLPGIIGTQILDP-LNVLIAMSLYTVALLVRNVADGLGAVPEHVRQAATAMG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +  WR    + LP   P    G   A     +   V+ +            LG       
Sbjct: 120 LGRWRRLTRVELPLAVPVIAAGLRVAAVSNVSIVSVAALVGIPQ-------LGILFTRGF 172

Query: 548 EKGSFPEVVLGVLIMCCFVLALN--RFLWHPL 577
            +     + +G+       L  +    L   L
Sbjct: 173 NRDDLGMIAVGMAGCVLLALLFDAVILLLRRL 204


>gi|293397084|ref|ZP_06641358.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
 gi|291420555|gb|EFE93810.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Serratia odorifera DSM 4582]
          Length = 265

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 17/189 (8%)

Query: 75  AMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + +I++L          +S  +    ++  ++ + Q+ P +  L   V            
Sbjct: 72  SSLIAVLIGVTAGVAVTRSAGKEFRSLVETVVAVGQTFPPVAVLAIAVPVMG-------- 123

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E  AI A+    +  +       + ++P    EV++   +S  Q  W + +P + P +
Sbjct: 124 FSEQPAIIALVLYGLLPILQGTLAGIDSLPAATREVAQGVGMSPRQILWRVELPLAAPVI 183

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  +  S+        A+    VG        +GS I + +   +   ++   L +  + 
Sbjct: 184 VAGIRTSVII--NIGTAAIASTVGTKS-----LGSPIIIGLSGFNTAYVIQGALVVALLA 236

Query: 253 FLYDQLLFR 261
            + D++  R
Sbjct: 237 IIIDRIFER 245



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 13/252 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R   P+        +     L      +V G+       +  +             I L 
Sbjct: 3   RVGAPQGAGGRRGWRDPLPWLIALLLALVFGMNHLQGLFAAWFPDLQRPVYQQDSFISLL 62

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +  V V  +IA +I +  G+ +         S ++    +   FP      + V  +
Sbjct: 63  LAHLLLVAVSSLIAVLIGVTAGVAVTRSAGKEFRSLVETVVAVGQTFPPVAVLAIAVPVM 122

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            +      + L L  +      IL   +AG  + P   +EVA    ++  +    + LP 
Sbjct: 123 GFSEQPAIIALVLYGLL----PILQGTLAGIDSLPAATREVAQGVGMSPRQILWRVELPL 178

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  V G  T+       + ++         + T  LG+ I       +   V+ G L+
Sbjct: 179 AAPVIVAGIRTSVIINIGTAAIA-------STVGTKSLGSPIIIGLSGFNTAYVIQGALV 231

Query: 562 MCCFVLALNRFL 573
           +    + ++R  
Sbjct: 232 VALLAIIIDRIF 243


>gi|84514674|ref|ZP_01002038.1| ABC transporter, permease protein [Loktanella vestfoldensis SKA53]
 gi|84511725|gb|EAQ08178.1| ABC transporter, permease protein [Loktanella vestfoldensis SKA53]
          Length = 283

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 9/179 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +I  I    V +       ++  I P    +AA P     P+ V  +     +   
Sbjct: 94  MTGYVIGMICAFAVAVLADRSDFLTRGILPVGGFMAALPIVGIAPIFVKWLGSDWESKAA 153

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +++++ F     IL N++AG        +++  ++    W+    + LP   P+   G 
Sbjct: 154 VVAVMVFF----PILVNIVAGLRDTSAMQRDLMRTYGAGYWQTLFKLRLPAAMPFIFNGL 209

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A   A   +IV+E          T G+G  I+ S  + +   V   +++       L
Sbjct: 210 KIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGRLALDMVWAEIVVAAIAGSTL 263



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 90/244 (36%), Gaps = 14/244 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             I R + P IF L   ++   ++ +          P  I +    +L +  +    +  
Sbjct: 31  ARIIRVLVPVIFGLTLLLIWELLVRMTGVSPIVLPPPSMIAERFANSLPILWVDFEQTIV 90

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              M +  VI ++  F  A LA +S  L   ++P+   M ++PI+G     V +  + + 
Sbjct: 91  KGAM-TGYVIGMICAFAVAVLADRSDFLTRGILPVGGFMAALPIVGIAPIFVKWLGSDWE 149

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            K           +     + +  ++   L +      ++ R++    WQ  + L +P +
Sbjct: 150 SKAA--------VVAVMVFFPILVNIVAGLRDTSAMQRDLMRTYGAGYWQTLFKLRLPAA 201

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MP +   + ++ +      + +E         P  G+G  I+ ++    L  +   ++  
Sbjct: 202 MPFIFNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGRLALDMVWAEIVVA 256

Query: 249 LGVI 252
               
Sbjct: 257 AIAG 260


>gi|295696833|ref|YP_003590071.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
 gi|295412435|gb|ADG06927.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus tusciae DSM 2912]
          Length = 292

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 15/218 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T++P  I     I      +  +   T    L   V+SL    + A     S  L  VL 
Sbjct: 76  TSMPSQIATSFWIMAGQGQIGHHTWVTVRETLIGFVLSLGVGGLAAVALWWSSLLSKVLE 135

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +       ++  +      +   ++ +  I           +       
Sbjct: 136 PYLVVLNALPKVALGPIFYIWLGDRNSIYGMAVAISIVVTI---------LMLESGFREA 186

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            RD  ++  S   + WQ F  + +P S+P LV  M +++      V+  E +        
Sbjct: 187 GRDKLKLMESLGATRWQMFKLVVLPASIPSLVAAMKVNIGLTLVGVIMGEFLS------S 240

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             G+G  I    +   +  ++ ++  ++ V  +   L+
Sbjct: 241 KAGLGFLILYGGQVFQMNLVMTSIALLVIVSVVLYGLI 278



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 69/189 (36%), Gaps = 11/189 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+   ++  +++  +     + + +   +S  ++P+  +L A P     P+    +   
Sbjct: 101 VTVRETLIGFVLSLGVGGLAAVALWWSSLLSKVLEPYLVVLNALPKVALGPIFYIWLGDR 160

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +    + +++ ++       +  + +G      D  ++  S   T W+ ++ ++LP   P
Sbjct: 161 NSIYGMAVAISIVV-----TILMLESGFREAGRDKLKLMESLGATRWQMFKLVVLPASIP 215

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V       G      I+ E  S         GLG  I    +      V+  + ++  
Sbjct: 216 SLVAAMKVNIGLTLVGVIMGEFLS------SKAGLGFLILYGGQVFQMNLVMTSIALLVI 269

Query: 565 FVLALNRFL 573
             + L   +
Sbjct: 270 VSVVLYGLI 278


>gi|114705730|ref|ZP_01438633.1| putative transport system permease abc transporter protein
           [Fulvimarina pelagi HTCC2506]
 gi|114538576|gb|EAU41697.1| putative transport system permease abc transporter protein
           [Fulvimarina pelagi HTCC2506]
          Length = 250

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 5/143 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT    V  + IA ++ I +G  +G  P     +  +     + P +   P+ +      
Sbjct: 58  ITAISYVAGLAIALVVGIALGFLMGLVPTADKMLNMWVNTFLSAPLSALVPVFMILFGLG 117

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + + +     W I  +  AG         E++ SF  + +  +  I L    P
Sbjct: 118 ----TPTVIVTVFMFAVWIIALDTRAGVQNISPSLIEMSRSFGASRFERF-KITLFAALP 172

Query: 505 YYVTGAITACGGAWNASIVSEVA 527
             + G            ++ ++ 
Sbjct: 173 EILAGVRLGMIRGVKGVVIGQLL 195



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 9/170 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L   S  +    T +  ++ + I+L+       L         +L   ++   S P+   
Sbjct: 47  LTSSSFAEAMRITAISYVAGLAIALVVGIALGFLMGLVPTADKMLNMWVNTFLSAPLSAL 106

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   ++ F    P          I  +F   VW +       + NI   L E+SRSF  S
Sbjct: 107 VPVFMILFGLGTP--------TVIVTVFMFAVWIIALDTRAGVQNISPSLIEMSRSFGAS 158

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +++F  + +  ++P ++  + + M  G   VV  +++V    V  L  +
Sbjct: 159 RFERF-KITLFAALPEILAGVRLGMIRGVKGVVIGQLLVSIIGVGALFSL 207


>gi|251782472|ref|YP_002996774.1| phosphate transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391101|dbj|BAH81560.1| phosphate transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323127360|gb|ADX24657.1| putative phosphate ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 311

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 IRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFIRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|163744371|ref|ZP_02151731.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381189|gb|EDQ05598.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 306

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 8/179 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+  +  +L  I  +    D+  +        +  +   R       ++  + +  F   
Sbjct: 59  VLAAVLAVLGVILWSGALSDLSVMQEYASRADAFGREFIRHLGLAFGSLAAAAVIGFPLG 118

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFMNLYPGKVIGAELA-----AI 139
            L  +   L    +P+L  +Q+IP L         + +     PG             A 
Sbjct: 119 VLCHRLASLRGATLPVLSFLQTIPSLAMFGMMIPILGWVGANLPGARALGIAGIGFAPAF 178

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            A+    +  +  +    L + P    E +R   ++  Q+ W + +P  +P ++  + +
Sbjct: 179 LALVLYSLLPVVGNTVAGLASAPPAALEAARGMGMTPLQRLWRVELPLGLPIILTGLRI 237



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 16/192 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN- 449
              +  A++I  P+G+       +     P    L   P+   F +++  + +   N   
Sbjct: 104 FGSLAAAAVIGFPLGVLCHRLASLRGATLPVLSFLQTIPSLAMFGMMIPILGWVGANLPG 163

Query: 450 -----------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          L ++  +   ++ N +AG ++ P    E A    +T  +    + 
Sbjct: 164 ARALGIAGIGFAPAFLALVLYSLLPVVGNTVAGLASAPPAALEAARGMGMTPLQRLWRVE 223

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           LP   P  +TG           A I   +   G       GL     +    G+ P VVL
Sbjct: 224 LPLGLPIILTGLRIVLVQNIGLAVIAGLIGGGGFGTFVFQGLNQTATDLILLGALPTVVL 283

Query: 558 GV---LIMCCFV 566
            +   ++M   V
Sbjct: 284 ALSAAIVMDILV 295


>gi|187918758|ref|YP_001887789.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
 gi|187717196|gb|ACD18419.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 287

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +R       L           +D F+F     +   I  Q I + VN  +   +L  +W 
Sbjct: 39  LRIVVLVVVLGGWELSARLKWIDPFFFS----MPSAIFDQIIDWFVNGTSQGPLLTQVW- 93

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+    +  II S+  +  GI +G    +S     + ++  + P  V   + V  + 
Sbjct: 94  --VTLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALG 151

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
               +      +++ F        N   G           A     +  +    +++P  
Sbjct: 152 LGMASKVALAVVMVFFVVF----ANAFQGVREADRFMIANAQILGASRRQVTTSVVIPSA 207

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             + +     + G A   ++V E            G+G  I+ +    +   V   ++++
Sbjct: 208 LSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAAMIVL 261

Query: 563 CCFVLALNRFL 573
               LA +  L
Sbjct: 262 AVVALAADYLL 272



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRFMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 261 LAVVALAADYLLTAVEQRLLKW 282


>gi|121610437|ref|YP_998244.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121555077|gb|ABM59226.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 282

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 10/219 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + W+ VV    +         +V    Y     ++     T         I ++  I
Sbjct: 46  GLLLMWWAVVAWFGVEPFIAPSPVLVLQTLYAKRDMLLSNLIPTAIEAAGGFAIGNLAAI 105

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            V         +     P   +  A P     P++V  +    + P + ++ L+ F   +
Sbjct: 106 LVATVFVHHKTLQDIFFPVVLMFNAIPIVAKAPILVLMMGNG-IAPKITIAALVCF---F 161

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
             L NV+ G  +      E+      +    +  + L    P+  +    A       ++
Sbjct: 162 PTLVNVVRGLESVNPQAMELMRMLSASKVEIFFRLRLFNALPHLFSALRIAASMCVIGAV 221

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           V E            G+GA I ++T       +   +++
Sbjct: 222 VGEWVG------ANAGVGAMIIQATFNFDSALLYAAIVM 254



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 19/257 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           + P +  +   ++   ++     G++    P  ++ +  +      L      T +    
Sbjct: 38  VLPTLGIVGLLLMWWAVVAWF--GVEPFIAPSPVLVLQTLYAKRDMLLSNLIPTAIEAAG 95

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
              I  L   + AT+    + L  +  P++ +  +IPI+      V+   N    K+  A
Sbjct: 96  GFAIGNLAAILVATVFVHHKTLQDIFFPVVLMFNAIPIVAKAPILVLMMGNGIAPKITIA 155

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L   F            ++ + L ++     E+ R    S  + F+ L +  ++P L  
Sbjct: 156 ALVCFF--------PTLVNVVRGLESVNPQAMELMRMLSASKVEIFFRLRLFNALPHLFS 207

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---TMLGV 251
            + ++ S     V+ +   VVG+ V    G+G+ I  A    D   +  A++   T+ G 
Sbjct: 208 ALRIAAS---MCVIGA---VVGEWVGANAGVGAMIIQATFNFDSALLYAAIVMSATLSGT 261

Query: 252 IFLYDQLLFRPMIVWSN 268
            FL   L  R +I W  
Sbjct: 262 FFLLVTLAERWLIRWQP 278


>gi|306827280|ref|ZP_07460567.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
 gi|304430427|gb|EFM33449.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
          Length = 311

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 12/178 (6%)

Query: 52  VPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPIL 104
            P   +   +P   A           V+S +    +A  AA        +    +L P +
Sbjct: 70  QPSVKNAAGIPYLGALPMITGSFLVTVLSAIIATPFAIGAAVFMTEISPKYGAKLLQPAV 129

Query: 105 DIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +++  IP + +    L   V +  +++ G   G  L+ +  +F   +  +TF    SL  
Sbjct: 130 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRA 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 189 VPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 11/168 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    V+  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTVLSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             T W+    ++L    P   T  I     A+  ++  ++       +
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVM 248


>gi|253577313|ref|ZP_04854631.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843317|gb|EES71347.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 300

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 88/221 (39%), Gaps = 17/221 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    L   S  +++ L        AA        +     L P+++++  IP + +   
Sbjct: 77  ALPFILGSFSTSILAALIAAPLGICAALFMVEIMPKFGKKYLQPVIELLAGIPSVVYGFV 136

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V ++ +++PG+ +G    A            + +   +L  +P  L+E S +   
Sbjct: 137 GLSIIVPFYRDIFPGQGLGILAGATVLSIMILPTITSIAT-DALSALPPGLKEGSYALGA 195

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSY 228
           + WQ      +P ++P L+  +++ M+  +   +A +M++     I          + S 
Sbjct: 196 TRWQTLSRTVLPTTLPSLLTGVVLGMARAFGEALAVQMVIGNAPHIPRSLFESTSTLTSV 255

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           I L++    +      +L  L +I +    +F  ++ W  +
Sbjct: 256 ITLSMGNTVMGTTQNNVLWTLALILMLMTFVFVFIVRWLER 296



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 25/218 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVS 442
               I+A++I  P+GI                 +QP  +LLA  P+ V+    L +    
Sbjct: 85  FSTSILAALIAAPLGICAALFMVEIMPKFGKKYLQPVIELLAGIPSVVYGFVGLSIIVPF 144

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVI-----AGASAFPNDFKEVASSFHITGWRWWRYI 497
           Y  + P   L +L        ++   I        SA P   KE + +   T W+     
Sbjct: 145 YRDIFPGQGLGILAGATVLSIMILPTITSIATDALSALPPGLKEGSYALGATRWQTLSRT 204

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL------RTTGLGAYIAES---TE 548
           +LP   P  +TG +     A+  ++  ++      H+       T+ L + I  S   T 
Sbjct: 205 VLPTTLPSLLTGVVLGMARAFGEALAVQMVIGNAPHIPRSLFESTSTLTSVITLSMGNTV 264

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            G+    VL  L +   ++    F++  +  +  R  +
Sbjct: 265 MGTTQNNVLWTLALILMLMT---FVFVFIVRWLERRAK 299


>gi|325291638|ref|YP_004277502.1| proline/glycine/betaine ABC transporter transmembrane protein
           [Agrobacterium sp. H13-3]
 gi|325059491|gb|ADY63182.1| proline/glycine/betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 388

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 9/205 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
           A R     + ++V + L       L  K  RL   L+  L+I+Q+IP +      +    
Sbjct: 176 ALRHVELAIGSLVAATLAGIPLGILCYKIERLRSGLLNALNIVQTIPSIALFGLLIAPLG 235

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +     PG             A  A+F   +  +  +    L  + + + E +R   ++ 
Sbjct: 236 WMAANVPGAAKIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLSGVSQAVREAARGLGMTP 295

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q+   +  P +MP ++  + + +        +A+ +   G  V    GIG      +  
Sbjct: 296 PQRLLRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDLVLL 355

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF 260
             +  +L      + +  L D  LF
Sbjct: 356 GTVPTVLLGFAAAITLDALIDSNLF 380



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 82/239 (34%), Gaps = 15/239 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L     +  +L +     +  V     W  +  I  +    D+ +   L  + +   + 
Sbjct: 128 RLQPKPTLRILLLLVATGTLAAVLTSGLWDDLSIIKEYTGRADIFWTEALRHVELA--IG 185

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++ A++  IP+GI       + S +     ++   P+   F L+++ + +   N     
Sbjct: 186 SLVAATLAGIPLGILCYKIERLRSGLLNALNIVQTIPSIALFGLLIAPLGWMAANVPGAA 245

Query: 453 SL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +             +   +   ++ N + G S      +E A    +T  +    +  P
Sbjct: 246 KIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLSGVSQAVREAARGLGMTPPQRLLRVEFP 305

Query: 501 GIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
              P  +TG           A+I + +   G       G+G    +    G+ P V+LG
Sbjct: 306 LAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDLVLLGTVPTVLLG 364


>gi|227819533|ref|YP_002823504.1| ABC transporter transmembrane protein [Sinorhizobium fredii NGR234]
 gi|227338532|gb|ACP22751.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 415

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 12/202 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              A R     L ++  +         L  +  RL   ++ +L+ +Q++P +      + 
Sbjct: 200 WAEAGRHLTLALGSLAAATAVGLPLGILCHRVDRLRAAVLNVLNAIQTVPSIALFGILIG 259

Query: 122 YFM--------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                          G        A  A+F   +  +  +    L  +PR   + +R   
Sbjct: 260 PLGWVAAHVPGAEAIGVRGIGVAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGLG 319

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALA 232
           ++ WQ+   +  P + P ++  + + +        +A+ +   G  V    GIG     A
Sbjct: 320 MTEWQRLVAVEFPLAFPVILAGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIG---QTA 376

Query: 233 IKEQDLLAILYAMLTMLGVIFL 254
           +    L A+   +L     I L
Sbjct: 377 MDLVLLGAVPTVVLAFTAAIAL 398



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 82/260 (31%), Gaps = 15/260 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
                   +        +   +L     +  +       +V G+     W  +  +  + 
Sbjct: 134 PASGFWILVFAFALLVADALTRLKPGPGLRLLFLAGALALVGGMLTTGRWDGLSILKEYA 193

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           +  D  +      +T+   +  +  A+ + +P+GI       + + +      +   P+ 
Sbjct: 194 SRTDTFWAEAGRHLTLA--LGSLAAATAVGLPLGILCHRVDRLRAAVLNVLNAIQTVPSI 251

Query: 432 VFFPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDF 479
             F +++  + +   +     ++             +   +   ++ N + G +  P   
Sbjct: 252 ALFGILIGPLGWVAAHVPGAEAIGVRGIGVAPAFVALFLYSLLPVVANTVVGLAGVPRAA 311

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTG 538
            + A    +T W+    +  P  FP  + G           A+I + +   G       G
Sbjct: 312 NDAARGLGMTEWQRLVAVEFPLAFPVILAGIRIVLVQNIGLATIAALIGGGGFGVFVFQG 371

Query: 539 LGAYIAESTEKGSFPEVVLG 558
           +G    +    G+ P VVL 
Sbjct: 372 IGQTAMDLVLLGAVPTVVLA 391


>gi|159044001|ref|YP_001532795.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911761|gb|ABV93194.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 287

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 91/236 (38%), Gaps = 14/236 (5%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
            +G    + P D +  V       +  + A+ T  R LS   +           A     
Sbjct: 56  AYGPFILSAPLDTMGTVGALAVDPAAWEIAALTLQRALSGFFLVAAAGTALGVAAGYFPA 115

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  ++ P++ ++  +P + ++   +++F         G++      I  S +  +     
Sbjct: 116 ILRLVTPLVTVLLGVPPIAWIVLAMIWFG--------GSDATVRTVILISALPVVFMGAA 167

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +    R L+ ++ +F     ++F  +G+  +   L   + +++   +   V +E++  
Sbjct: 168 RGITTRDRRLDRLAEAFGAGPLRRFLTMGLRQTTTTLFPALALALGTAFKVAVMAELLAN 227

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                   GIG  +A A    D+   L  +L  + ++   +  L +P+    +++R
Sbjct: 228 AG------GIGGALADARINLDIELALAWVLIAVTLLIAVEYTLVQPVKAEIDRWR 277



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 12/196 (6%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           +  +T+ R +    + +     +G+  G+ P I   + P   +L   P   +  L +   
Sbjct: 84  IAALTLQRALSGFFLVAAAGTALGVAAGYFPAILRLVTPLVTVLLGVPPIAWIVLAMIWF 143

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         +I  +   ++F   A G +        +A +F     R +  + L 
Sbjct: 144 GGSDATVRT-----VILISALPVVFMGAARGITTRDRRLDRLAEAFGAGPLRRFLTMGLR 198

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                       A G A+  ++++E+ +         G+G  +A++         +  VL
Sbjct: 199 QTTTTLFPALALALGTAFKVAVMAELLA------NAGGIGGALADARINLDIELALAWVL 252

Query: 561 IMCCFVLALNRFLWHP 576
           I    ++A+   L  P
Sbjct: 253 IAVTLLIAVEYTLVQP 268


>gi|29827880|ref|NP_822514.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29604981|dbj|BAC69049.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 257

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 69/210 (32%), Gaps = 16/210 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L      T    L    +S    ++ A +   S      L P+L   Q+IPI+   
Sbjct: 49  NRTDLWDQTLPTLQETLLGFALSFAAAWLVAVVLDFSAVARRGLYPLLVASQTIPIVAVA 108

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +++F      K++   L   F +  +       +   ++  +        RS     
Sbjct: 109 PLLIIWFGFGLLPKMLVVTLTTFFPLAANLAAGFAATDRDAMRLL--------RSLGTGR 160

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + F  + VP ++P     + +S++      V +E            G+G Y+       
Sbjct: 161 LRAFRLVRVPSALPHFFTGLRVSITYAVVGAVFAEYAG------AEKGLGIYMQAQKSAF 214

Query: 237 DLLAILYA--MLTMLGVIFLYDQLLFRPMI 264
               +  A  +  +L +       L + ++
Sbjct: 215 RTDLVFAAVTVTALLSIALFGATCLLQRLV 244



 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 10/202 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V    + +   +      T+   ++   ++      V + + F       + P       
Sbjct: 42  VLSEGWSNRTDLWDQTLPTLQETLLGFALSFAAAWLVAVVLDFSAVARRGLYPLLVASQT 101

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++    +  L       L++   T + +  N+ AG +A   D   +  S  
Sbjct: 102 IPIVAVAPLLIIWFGFGLLPKM----LVVTLTTFFPLAANLAAGFAATDRDAMRLLRSLG 157

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
               R +R + +P   P++ TG   +   A   ++ +E A          GLG Y+    
Sbjct: 158 TGRLRAFRLVRVPSALPHFFTGLRVSITYAVVGAVFAEYAGAEK------GLGIYMQAQK 211

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
                  V   V +     +AL
Sbjct: 212 SAFRTDLVFAAVTVTALLSIAL 233


>gi|328543914|ref|YP_004304023.1| nitrate/sulfonate ABC transporter permease [polymorphum gilvum
           SL003B-26A1]
 gi|326413658|gb|ADZ70721.1| Probable nitrate/sulfonate ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 378

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 89/284 (31%), Gaps = 15/284 (5%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
           R  G +   F++            +  +    P   +   +      +L   W  V+  +
Sbjct: 88  RHPGAAEAGFWALTVAAWLAAWLFVERLAAWRPSAPVARRAVSLAIPLLFGVWVLVLWEL 147

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR------VVVLIIIASIIWIPVGIWIG 409
           A+         +       D L          FR      V+V   I       V + + 
Sbjct: 148 AVVGFGIPKVLLPAPSAIWDRLISSGPVLWADFRQTFLKAVLVGYAIGCGAGFLVAVLVD 207

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P +   + P   L++A P     P++V    +   +     + ++I  T + +L N +
Sbjct: 208 RVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSK----AAVVIIMTFFPMLVNTV 263

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G ++     +++  ++  +  +    + LP   P+           A   +IV+E    
Sbjct: 264 TGLASADRMQRDLMHTYAASYGQTLVKLRLPMALPFIFNALKINSTLALIGAIVAEFFGT 323

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     G+G  I+    + +   V   + +           +
Sbjct: 324 PIV-----GMGFRISTEVGRMNVDMVWAEIAVAALAGSLFYGLI 362



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 93/250 (37%), Gaps = 17/250 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTF 84
           VLV+  + ++  GI +  +P        +      L     +T L+ +L    I     F
Sbjct: 141 VLVLWELAVVGFGIPKVLLPAPSAIWDRLISSGPVLWADFRQTFLKAVLVGYAIGCGAGF 200

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L  +   L   L+PI +++ ++PI+G     V++F   +P K           +  
Sbjct: 201 LVAVLVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSKAA--------VVII 252

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + M  +    L +  R   ++  ++  S  Q    L +P ++P +   + ++ +   
Sbjct: 253 MTFFPMLVNTVTGLASADRMQRDLMHTYAASYGQTLVKLRLPMALPFIFNALKINSTLAL 312

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FR 261
              + +E         P+ G+G  I+  +   ++  +   +        L+  L+    R
Sbjct: 313 IGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWAEIAVAALAGSLFYGLITLAER 367

Query: 262 PMIVWSNKFR 271
               W    R
Sbjct: 368 VFTFWHPSVR 377


>gi|84489163|ref|YP_447395.1| hypothetical protein Msp_0342 [Methanosphaera stadtmanae DSM 3091]
 gi|84372482|gb|ABC56752.1| PstC [Methanosphaera stadtmanae DSM 3091]
          Length = 291

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 9/174 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSI 110
           +            +  L  M ISL+     +   A       +  +  +L P +  +  I
Sbjct: 56  EPKHDIYGVLPMIIGTLEMMAISLIIAIPLSVGCAIFITEYANNTMKKILKPTIQSLAGI 115

Query: 111 PIL--GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           P +  GF    V+  F+  + G    + +AA   +    +  +      ++  +P   +E
Sbjct: 116 PSVIYGFFGLVVLVPFIREHFGGTGFSLIAAAIILAIMILPTIISVTEDAIMAVPGSFKE 175

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            S     + WQ  + + +P + PG++  +++ M       +A  M+      IP
Sbjct: 176 ASLGLGATKWQTIYKVIIPSAAPGIITAIILGMGRAIGETMAVIMVAGNVAQIP 229



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAA 427
            +  + I+     +   + ++ I+ II IP+ +             +   ++P  Q LA 
Sbjct: 55  WEPKHDIYGVLPMIIGTLEMMAISLIIAIPLSVGCAIFITEYANNTMKKILKPTIQSLAG 114

Query: 428 FPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFK 480
            P+ ++    +  +       +     +L  + +++       + +V      A P  FK
Sbjct: 115 IPSVIYGFFGLVVLVPFIREHFGGTGFSLIAAAIILAIMILPTIISVTEDAIMAVPGSFK 174

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           E +     T W+    +I+P   P  +T  I   G A   ++   + + 
Sbjct: 175 EASLGLGATKWQTIYKVIIPSAAPGIITAIILGMGRAIGETMAVIMVAG 223


>gi|78061346|ref|YP_371254.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77969231|gb|ABB10610.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 255

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 17/205 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P+  D  SL          +  + VI  +          +        V   ++DI Q+ 
Sbjct: 50  PVIYDRASLLDLTLAHLGTVALSSVIGTIVAVAAGIAVTRPWGADFLPVARSVVDIGQTF 109

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V          +I   L  +  +F         S    L ++PRD+ + +R
Sbjct: 110 PPVAVLALAVPAVGFGLKPVLIALVLYGLLPVFE--------STIAGLEDVPRDVVDAAR 161

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +SGWQ+   + +P + P +V  + ++       VV +       + +   G+G  I 
Sbjct: 162 GMGMSGWQQLVSVELPLAFPVIVNGVRLA-------VVINLGTATIGSTVAARGLGDVII 214

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             ++  +   +L   + +  +  L 
Sbjct: 215 AGLQTSNTAFVLQGGVIVGLLAVLV 239



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +I+ +  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSVIGTIVAVAAGIAV-TRPWGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGVRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|323528866|ref|YP_004231018.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323385868|gb|ADX57958.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 287

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  II S+  +  GI +G    +S     + ++  + P  V   + V
Sbjct: 88  LLTQVWVTLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFV 147

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 148 IALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRYMIANAQILGASRRQVTTSVV 203

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 204 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 257

Query: 559 VLIMCCFVLALNRFL 573
           ++++    LA +  L
Sbjct: 258 MIVLAVVALAADYLL 272



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +       +  +++ L  V    + I  SIP +   +  V+      
Sbjct: 95  TLEETGLGFIIGSVAGVFCGIVLGRNKLLSDVFSLYIKIANSIPRVVLGSVFVIALGLGM 154

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             KV  A +   F +F         + +Q +    R +   ++    S  Q    + +P 
Sbjct: 155 ASKVALAVVMVFFVVFA--------NAFQGVREADRYMIANAQILGASRRQVTTSVVIPS 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 207 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 260

Query: 248 MLGVIFLYDQLL---FRPMIVW 266
           +  V    D LL    + ++ W
Sbjct: 261 LAVVALAADYLLTAVEQRLLKW 282


>gi|313897307|ref|ZP_07830851.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312958028|gb|EFR39652.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 255

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   VV ++IA+++ I + I +         I P   +    P  V  PL    + 
Sbjct: 56  SLVTLQEAVVGLLIATLLAIVIAIGMDLSQPFKHSIFPHLVVTQTVPVMVLGPLFSIWLG 115

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +          L++IF   + +                 +  SF    W+ + Y+ +P  
Sbjct: 116 FG----MAPKILMVIFMCFFPVAIAFCDALGKVDEHQISLLKSFGAKKWQIYAYVKIPAA 171

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                +G   A       +IV E  S       + GLG Y+          +V   V+++
Sbjct: 172 STALFSGLKVAATYCIGGAIVGEWLS------ASAGLGYYMIRVKNGYMLDKVFACVVVI 225

Query: 563 CCFVLAL 569
               L L
Sbjct: 226 IALSLLL 232



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 92/248 (37%), Gaps = 25/248 (10%)

Query: 13  RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RI   +F LL  + V  G ++I    +     P +I+  +    D+  L  ++  T   
Sbjct: 5   KRIGMPLFTLLLVLAVWEGCVHIFDIDLYILPAPSNIIQALFANRDI--LWMHSLVTLQE 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +  ++I+ L   V A     S+     + P L + Q++P++       ++       K 
Sbjct: 63  AVVGLLIATLLAIVIAIGMDLSQPFKHSIFPHLVVTQTVPVMVLGPLFSIWLGFGMAPK- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I  +     + +  +   +L  +      + +SF    WQ + Y+ +P +   
Sbjct: 122 -------ILMVIFMCFFPVAIAFCDALGKVDEHQISLLKSFGAKKWQIYAYVKIPAASTA 174

Query: 192 LVWNMMMS----MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           L   + ++    + G           +VG+ +    G+G Y+        L  +   ++ 
Sbjct: 175 LFSGLKVAATYCIGGA----------IVGEWLSASAGLGYYMIRVKNGYMLDKVFACVVV 224

Query: 248 MLGVIFLY 255
           ++ +  L 
Sbjct: 225 IIALSLLL 232


>gi|240138312|ref|YP_002962784.1| ABC family transporter permease protein [Methylobacterium
           extorquens AM1]
 gi|240008281|gb|ACS39507.1| ABC family transporter permease protein [Methylobacterium
           extorquens AM1]
          Length = 301

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +   V          +++   +T+   +    + S++ I + + I     + + + P+  
Sbjct: 77  LSRSVLGVPLSSKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIV 136

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                P     P+++  +    L   L  +++  +   + +   ++ G +A     +++ 
Sbjct: 137 ASQTVPILAVAPIIIVALGAAGLTGLLPKAVIAAYLCFFPVTVGMVKGLNAPDRIQRDLM 196

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  +  +    +  P   PY       A   +   +IV+E+ +         GLGA +
Sbjct: 197 RTYSASRGQILARLRWPSALPYLFASLKIAVAASLVGTIVAELPTGAQ-----AGLGARL 251

Query: 544 AESTEKGSFPEVV 556
              +  G   ++ 
Sbjct: 252 LAGSYYGQTIQIW 264



 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +A  T    L+   +  L     A      R +   L+P +   Q++PIL   
Sbjct: 88  SKRSLVYHAWVTLSATLTGFALGSLLGIALAVAIVHLRSVEASLMPWIVASQTVPILAVA 147

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V         ++   + A +  F    + +T  M + L    R   ++ R++  S 
Sbjct: 148 PIIIVALGAAGLTGLLPKAVIAAYLCF----FPVTVGMVKGLNAPDRIQRDLMRTYSASR 203

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    L  P ++P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 204 GQILARLRWPSALPYLFASLKIAVAASLVGTIVAELPTGAQA-----GLGARLLAGSYYG 258

Query: 237 DLLAIL 242
             + I 
Sbjct: 259 QTIQIW 264


>gi|227891651|ref|ZP_04009456.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus salivarius ATCC 11741]
 gi|227866567|gb|EEJ73988.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus salivarius ATCC 11741]
          Length = 320

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 86/221 (38%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF--- 115
           A    L      +++ +F   +A   A       S+++  +L  +++++  IP + +   
Sbjct: 97  ALPMILGSFGVTLLAAIFVTPFAIGTALYITELASKKMKKILQIVIELLVGIPSVVYGFI 156

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +    + G   G    A+   F   +  +T     SL  +P+     S +   
Sbjct: 157 GLNVVVPFIRENFGGTGYGILAGAVVL-FVMILPTVTSLTVDSLKAVPKHYRSASLALGA 215

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  +++ +  +  G++  ++  M+  +   +A +M++                 T +
Sbjct: 216 TPWQTMFHVTLKAATSGILTAIVFGMARAFGEALAVQMVIGNASLMPTSLLNPASTLTSV 275

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +   +    L ++   +L M  +  L  +L+ R
Sbjct: 276 LTMGIGNTVMGTVGNNALWSLALVLLAMSLIFNLIVRLIGR 316



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 71/217 (32%), Gaps = 21/217 (9%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF----FP 435
           + LG   +  +  + +    I   + I       +   +Q   +LL   P+ V+      
Sbjct: 100 MILGSFGVTLLAAIFVTPFAIGTALYITELASKKMKKILQIVIELLVGIPSVVYGFIGLN 159

Query: 436 LVVSCVS--YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWR 492
           +VV  +   +      +    +++F      + +  +    A P  ++  + +   T W+
Sbjct: 160 VVVPFIRENFGGTGYGILAGAVVLFVMILPTVTSLTVDSLKAVPKHYRSASLALGATPWQ 219

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------------G 538
              ++ L       +T  +     A+  ++  ++       + T+              G
Sbjct: 220 TMFHVTLKAATSGILTAIVFGMARAFGEALAVQMVIGNASLMPTSLLNPASTLTSVLTMG 279

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +G  +  +    +   + L +L M      + R +  
Sbjct: 280 IGNTVMGTVGNNALWSLALVLLAMSLIFNLIVRLIGR 316


>gi|116492136|ref|YP_803871.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116102286|gb|ABJ67429.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Pediococcus pentosaceus ATCC 25745]
          Length = 260

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 23/229 (10%)

Query: 345 DIFWFCVVCGVAIGIAWQSIGYI-------------VNHFTYQDVLYVIWLGCITMFRVV 391
            I +  +V  + I   WQ+I +              V      D   +     +T+    
Sbjct: 11  SINFLPIVAVLLILAIWQAISFFQIIPEFLLPSPLSVLEVFKSDYSALFSNSLVTLIEAF 70

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             +    ++ + + + +     I   + P   +    P     PL++    Y      L 
Sbjct: 71  WGLCFGVLLGVGLALIMDLFHPIYKALYPLLVITQTIPTVAIAPLLILWFGYG----ILP 126

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             +L++  T + I   ++    +   D   +  +      + + YI  P           
Sbjct: 127 KVVLVVATTFFPIAVGMLDAFRSTDKDLITLMRTLGANTPKIYFYIKFPDAIDSLFASLK 186

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            +   +   ++VSE     +      GLG Y+    +  ++ ++   + 
Sbjct: 187 ISASYSLVGAVVSEWVGGFN------GLGVYMTRVMKAYAYDKMFAVIF 229



 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 85/231 (36%), Gaps = 16/231 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQ--ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           N   ++A +L++ I   +       E  +P  +  +     D  +L   +  T +     
Sbjct: 13  NFLPIVAVLLILAIWQAISFFQIIPEFLLPSPLSVLEVFKSDYSALFSNSLVTLIEAFWG 72

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +   +L     A +      +   L P+L I Q+IP +      +++F            
Sbjct: 73  LCFGVLLGVGLALIMDLFHPIYKALYPLLVITQTIPTVAIAPLLILWFGYGI-------- 124

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L  +  +  +  + +   M  +  +  +DL  + R+   +  + ++Y+  P ++  L  +
Sbjct: 125 LPKVVLVVATTFFPIAVGMLDAFRSTDKDLITLMRTLGANTPKIYFYIKFPDAIDSLFAS 184

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           + +S S      V SE +   +      G+G Y+   +K      +   + 
Sbjct: 185 LKISASYSLVGAVVSEWVGGFN------GLGVYMTRVMKAYAYDKMFAVIF 229


>gi|221195633|ref|ZP_03568687.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium rimae ATCC 49626]
 gi|221184399|gb|EEE16792.1| binding-protein-dependent transport systems inner membrane
           component [Atopobium rimae ATCC 49626]
          Length = 271

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 11/271 (4%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  +T   +R         +     + + L I+    +      I    +  +    T  
Sbjct: 8   RSFKTHLFLRGQTDRLSSGVLRLLAILFWLVIWQLAALFVGKQFILPSPLETLGCLGTLI 67

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
                  +   ++  + +    A +  +   +       I + I P    + + P   F 
Sbjct: 68  GTGEFWVITAHSLLHIALGFFSALVGGVLASVASYRIRLIKTLISPLIMAIKSIPVASFV 127

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L++  +   +L+      ++        I  N++ G  +      E+A  F I G    
Sbjct: 128 ILLLVWMHASYLS-----VVVAHLIAFPIIYTNLLRGLESTDTKLLEMADIFQIQGCARI 182

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R + L  + PY+      A G  W A I +EV S        + +G  +  +      P 
Sbjct: 183 RSLYLSQVLPYFEAATSLALGFCWKAGIAAEVIS-----TPASSIGGELYSAKVFLDTPN 237

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +    +++ C    + +     L     R +
Sbjct: 238 LFAWTVVIVCISALIEKGF-SRLIRMIVRRI 267



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 81/200 (40%), Gaps = 9/200 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L ++++  +  + +        P + +  +   +         + + L +      +L+
Sbjct: 33  ILFWLVIWQLAALFVGKQFILPSPLETLGCLGTLIGTGEFWVITAHSLLHIALGFFSALV 92

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + +  + + R +  ++ P++  ++SIP+  F+   +V+    Y   V+   +A  F 
Sbjct: 93  GGVLASVASYRIRLIKTLISPLIMAIKSIPVASFVILLLVWMHASYLSVVVAHLIA--FP 150

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I  +       ++ + L +    L E++  F++ G  +   L +   +P       +++ 
Sbjct: 151 IIYT-------NLLRGLESTDTKLLEMADIFQIQGCARIRSLYLSQVLPYFEAATSLALG 203

Query: 202 GGWFFVVASEMIVVGDTVIP 221
             W   +A+E+I    + I 
Sbjct: 204 FCWKAGIAAEVISTPASSIG 223


>gi|15675204|ref|NP_269378.1| putative phosphate ABC transporter permease [Streptococcus pyogenes
           M1 GAS]
 gi|94990578|ref|YP_598678.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|13622371|gb|AAK34099.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|94544086|gb|ABF34134.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10270]
          Length = 311

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 12/178 (6%)

Query: 52  VPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPIL 104
            P   +   +P   A           ++S +    +A  AA        +    +L P +
Sbjct: 70  QPSVKNAAGIPYLGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAV 129

Query: 105 DIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +++  IP + +    L   V +  +++ G   G  L+ +  +F   +  +TF    SL  
Sbjct: 130 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRA 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 189 VPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|19746173|ref|NP_607309.1| phosphate ABC transporter [Streptococcus pyogenes MGAS8232]
 gi|19748353|gb|AAL97808.1| putative phosphate ABC transporter [Streptococcus pyogenes
           MGAS8232]
          Length = 311

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 12/178 (6%)

Query: 52  VPITLDVHSLPQ-YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPIL 104
            P   +   +P   A           V+S +    +A  AA        +    +L P +
Sbjct: 70  QPSVKNAAGIPYLGALPMITGSFLVTVLSAIIATPFAIGAAIFMTEISPKYGAKLLQPAV 129

Query: 105 DIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           +++  IP + +    L   V +  +++ G   G  L+ +  +F   +  +TF    SL  
Sbjct: 130 ELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRA 188

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           +PR   E S +   + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 189 VPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 11/168 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    V+  IIA+   I   I++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTVLSAIIATPFAIGAAIFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             T W+    ++L    P   T  I     A+  ++  ++       +
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVM 248


>gi|82752041|ref|YP_417782.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
 gi|82657572|emb|CAI82016.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
          Length = 231

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 57/145 (39%), Gaps = 8/145 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L     +  L  +  ++ + L       L A+  +L   ++ I +I+Q++P++  
Sbjct: 15  TNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 +  +F   +  +  + Y  + ++   +++  +   ++
Sbjct: 75  LAILMLVMGLG--------SETVVLTVFLYALLPIIKNTYTGIASVDASIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSM 200
             Q    + +P S+  ++  + +++
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    +   V  ++ A++I IP+GI +     +S  +   A ++   P
Sbjct: 11  NYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVP 70

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++  +       +  + L +       I+ N   G ++     K+      +T
Sbjct: 71  VIAMLAILMLVMGLG----SETVVLTVFLYALLPIIKNTYTGIASVDASIKDAGKGMGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
             +  R I LP      + G   A 
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151


>gi|21224394|ref|NP_630173.1| ABC transporter permease [Streptomyces coelicolor A3(2)]
 gi|4691390|emb|CAB41557.1| probable ABC transport permease [Streptomyces coelicolor A3(2)]
          Length = 221

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + +A+ I +PVG+  G      + +   A    A P+     L+   V    L   +
Sbjct: 35  LMALGLAAAIGLPVGLLTGHTGRGGNAVAFVATAARALPSFGLLVLIAVVVGIGLLPVMV 94

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        IL        +      + A    +        + LP   P  ++G 
Sbjct: 95  PLVVL----AVPPILVTTYEAVRSVDPSPVDAARGMGMHESGILFRVELPVALPLVLSGL 150

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +A     + + ++   S G       G+G YI +   +  + +VV G  ++    L   
Sbjct: 151 RSAAIQVVSTATIAAYVSLG-------GIGRYIIDGLYQRDYEKVVGGATLVAVLALVTL 203

Query: 571 RFLW 574
              W
Sbjct: 204 ALFW 207



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +P          L A+ ++         L   + R G  +  +    +++P  G L   
Sbjct: 22  GIPTRLLEHVQYTLMALGLAAAIGLPVGLLTGHTGRGGNAVAFVATAARALPSFGLLVLI 81

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            V              L  +  +    V  +  + Y+++ ++     + +R   +     
Sbjct: 82  AVVVGIGL--------LPVMVPLVVLAVPPILVTTYEAVRSVDPSPVDAARGMGMHESGI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  +          +  + +G       GIG YI   + ++D  
Sbjct: 134 LFRVELPVALPLVLSGLRSAAIQVVSTATIAAYVSLG-------GIGRYIIDGLYQRDYE 186

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            ++     +  +  +   L +
Sbjct: 187 KVVGGATLVAVLALVTLALFW 207


>gi|238749874|ref|ZP_04611378.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           rohdei ATCC 43380]
 gi|238711803|gb|EEQ04017.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           rohdei ATCC 43380]
          Length = 256

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 20/200 (10%)

Query: 74  SAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            + +I++           +   +    V+  ++ + Q+ P +  L   V           
Sbjct: 64  ISSIIAVFIGVSAGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG------- 116

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             +E  AI A+    +  +       + ++ +D+ EV++   +S WQ    + +P + P 
Sbjct: 117 -FSEKPAIIALVLYGLLPILQGTITGIESVSQDIREVAQGVGMSAWQILCRVELPLAAPV 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  +  S+        A+    VG        +GS I + +   +   ++   + +  +
Sbjct: 176 IVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAVVVALL 228

Query: 252 IFLYDQLLF---RPMIVWSN 268
             + D +     R +  W  
Sbjct: 229 AIITDMIFTRWNRRLSRWRE 248



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 20/196 (10%)

Query: 396 IASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           I+SII + +G+  G            S ++    +   FP      + V  + +      
Sbjct: 64  ISSIIAVFIGVSAGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKPAI 123

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L L  +      IL   I G  +   D +EVA    ++ W+    + LP   P  V G
Sbjct: 124 IALVLYGLL----PILQGTITGIESVSQDIREVAQGVGMSAWQILCRVELPLAAPVIVAG 179

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++         + T  LG+ I       +   V+ G +++    +  
Sbjct: 180 IRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAVVVALLAIIT 232

Query: 570 NRFL--W-HPLYLYGT 582
           +     W   L  +  
Sbjct: 233 DMIFTRWNRRLSRWRE 248


>gi|290890035|ref|ZP_06553118.1| hypothetical protein AWRIB429_0508 [Oenococcus oeni AWRIB429]
 gi|290480226|gb|EFD88867.1| hypothetical protein AWRIB429_0508 [Oenococcus oeni AWRIB429]
          Length = 319

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 19/257 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G++   L GI         V          +L   A    +      ++S L    +A  
Sbjct: 56  GLMAFTLDGINPFKFIFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIA 115

Query: 90  AAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAI 139
            A       S     ++ P+++++  IP + +    LT  V      + G   G  LA  
Sbjct: 116 TALFMVELQSNWGKKIMQPVVELLVGIPSVVYGFIGLTVVVPLLRKTFGGSGFGI-LAGT 174

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  +T     +L N+P    E++ +   + WQ  + + +  + PG++  ++  
Sbjct: 175 IVLFVMILPTITSLTVDALRNVPNHYRELALAIGATRWQMIYKVILRAATPGILTAVVFG 234

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPG-------IGSYIALAIKEQDLLAILYAMLTMLGVI 252
           M+  +   +A +M+ VG+  I   G       + S +   I      ++   +L  L  +
Sbjct: 235 MARAFGEALAVQMV-VGNAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLATL 293

Query: 253 FLYDQLLFRPMIVWSNK 269
            L   L F  +I +  K
Sbjct: 294 LLIMSLFFNLIIRFIGK 310



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 81/241 (33%), Gaps = 27/241 (11%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
             G + N  T      + +     +    ++ ++++++  P  I                
Sbjct: 71  IFGTVWNPTTPDSNGNLQFGAFPMIVGSFLVTLLSALVATPFAIATALFMVELQSNWGKK 130

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +QP  +LL   P+ V+  + ++ V       +      +    +++F      + +  +
Sbjct: 131 IMQPVVELLVGIPSVVYGFIGLTVVVPLLRKTFGGSGFGILAGTIVLFVMILPTITSLTV 190

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                 PN ++E+A +   T W+    +IL    P  +T  +     A+  ++  ++   
Sbjct: 191 DALRNVPNHYRELALAIGATRWQMIYKVILRAATPGILTAVVFGMARAFGEALAVQMVVG 250

Query: 530 GH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                             + T G+G     S +      +   +LIM  F   + RF+  
Sbjct: 251 NAPIMPNGLLESASTLTSILTQGIGNTSDGSVQNDVLWTLATLLLIMSLFFNLIIRFIGK 310

Query: 576 P 576
            
Sbjct: 311 R 311


>gi|326791010|ref|YP_004308831.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326541774|gb|ADZ83633.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 268

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 88/239 (36%), Gaps = 15/239 (6%)

Query: 22  LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           L+ F+ +  +   L        + P ++  +  + +   SL ++ + +    +    I  
Sbjct: 30  LVGFIGLWEVAARLGWLNTFLFSSPSEVYQLFLVYIGDGSLFKHVAISVWETILGFSIGT 89

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               + A     S  +  +L P+L ++ ++P        +V+      G V+ A   +I 
Sbjct: 90  ALGIIIAIGLWWSETVAKILDPVLVVLNALPKTALAPILIVWAGAGIGGIVLTAVTISIV 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                       S Y    ++  +  ++  SF  +  Q    L +P ++  +V  + +++
Sbjct: 150 T--------TILSAYNYFIHMDEEKIKMLTSFGATKVQILTKLILPANLANIVNIIKINI 201

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              W  V+  E +V         G+G  I    +   L  ++  ++ +    F+   ++
Sbjct: 202 GLSWVGVIVGEFLV------SRYGLGYLIVYGGQVFRLDLVMMGVVVLAVCAFVMYSIV 254



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 17/234 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLYVIWLGCITMFRVVVLII 395
           ++ +  F  +  VA  + W +     +          Y     +     I+++  ++   
Sbjct: 27  LILLVGFIGLWEVAARLGWLNTFLFSSPSEVYQLFLVYIGDGSLFKHVAISVWETILGFS 86

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I + + I + I + +   ++  + P   +L A P     P+++             + L 
Sbjct: 87  IGTALGIIIAIGLWWSETVAKILDPVLVVLNALPKTALAPILIVWAGAGIGG----IVLT 142

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +  +    + +          +  ++ +SF  T  +    +ILP      V       G
Sbjct: 143 AVTISIVTTILSAYNYFIHMDEEKIKMLTSFGATKVQILTKLILPANLANIVNIIKINIG 202

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            +W   IV E        +   GLG  I    +      V++GV+++      +
Sbjct: 203 LSWVGVIVGEFL------VSRYGLGYLIVYGGQVFRLDLVMMGVVVLAVCAFVM 250


>gi|405861|gb|AAA60493.1| yehY [Escherichia coli]
 gi|744168|prf||2014253AB yehY gene
          Length = 301

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 73/181 (40%), Gaps = 15/181 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++    +  A++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 127 LAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 186

Query: 122 YFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P     G        A+ A+    +  +   +   L  IPRD+ E +R+  +SG
Sbjct: 187 ALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSG 246

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       V + +I  G       G G+ +     +Q
Sbjct: 247 AQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAG-------GFGALVFQGAAKQ 299

Query: 237 D 237
            
Sbjct: 300 R 300



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++ ++    ++L +    +   +        +  +  +   QDV        +T+ 
Sbjct: 75  DAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLL 134

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A +I +P+GIW  F       I     ++   P+   F L+++ ++      
Sbjct: 135 --FGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAF 192

Query: 449 NLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+ G +  P D  E A +  ++G + + +
Sbjct: 193 PWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLH 252

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           + LP   P ++             ++++ +   G 
Sbjct: 253 VQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGG 287


>gi|227515095|ref|ZP_03945144.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus fermentum
           ATCC 14931]
 gi|260662064|ref|ZP_05862960.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|227086543|gb|EEI21855.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus fermentum
           ATCC 14931]
 gi|260553447|gb|EEX26339.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 214

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 17/196 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             Y  +  +   S +VI++L +     L +K  ++ ++      +++ IP         +
Sbjct: 17  WGYVGQHLVLSFSVLVIAMLISLPLGYLGSKHPKVALICSSFSQVLRIIPS--------L 68

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + L    +    + A  A+    +  +  +       +    +EV  +  ++  Q  W
Sbjct: 69  GLLFLLIPLIGTGVVPAGIALVILAIPPILINTILGFNEVGTIYQEVGVALGMNERQLLW 128

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP ++P L+  + +++      ++AS  +    T I   G+G+ I   +   D+  +
Sbjct: 129 QVKVPLALPYLLNGIKLAL----IEIIASATLA---TYIGAGGLGTLIFTGLGLYDMADV 181

Query: 242 LY--AMLTMLGVIFLY 255
           +   A + ML +I + 
Sbjct: 182 IIGGASVAMLSLITMV 197



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++IA +I +P+G      P ++     F+Q+L   P+     L++  +    +   + L 
Sbjct: 31  LVIAMLISLPLGYLGSKHPKVALICSSFSQVLRIIPSLGLLFLLIPLIGTGVVPAGIALV 90

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +L I      IL N I G +     ++EV  +  +   +    + +P   PY + G   A
Sbjct: 91  ILAIP----PILINTILGFNEVGTIYQEVGVALGMNERQLLWQVKVPLALPYLLNGIKLA 146

Query: 514 CG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 +A++ + + + G   L  TGLG Y       G     +L ++ M  F L +
Sbjct: 147 LIEIIASATLATYIGAGGLGTLIFTGLGLYDMADVIIGGASVAMLSLITMVGFDLLI 203


>gi|86608073|ref|YP_476835.1| quaternary amine ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556615|gb|ABD01572.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 205

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 75/213 (35%), Gaps = 18/213 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              + Q        +   + ++++     A L    R L + ++ IL I+ ++P L  + 
Sbjct: 8   PGLMWQLTQEHLAMVGMTLGMAVVLAVPLALLVHHVRWLALSVMGILSILYTVPSLALII 67

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V +              + + A+       +       L ++   + E ++   ++ W
Sbjct: 68  LLVPWLGLNAR--------SVVVAMVIYTQVILVRHFCVGLRSVEPAILEAAKGMGMNLW 119

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q++W + VP  +P ++  + ++                        G+G+ +   I +  
Sbjct: 120 QRWWQVQVPLMLPIVLAGLRLAAIVAIAIATV-------GAKFGAGGLGTLLFDGIAQAG 172

Query: 238 LLAILYAM-LTMLGVIFLYDQLLFRPMIVWSNK 269
               ++A  L +  +  L +  L    + W+ +
Sbjct: 173 RYDKIWAGSLAVGSLALLVNTALLS--LEWAAR 203



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + + +A ++ +P+ + +     ++  +     +L   P+     L+V  +     
Sbjct: 19  LAMVGMTLGMAVVLAVPLALLVHHVRWLALSVMGILSILYTVPSLALIILLVPWLGLNAR 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +    + + M+  TQ  ++ +   G  +      E A    +  W+ W  + +P + P  
Sbjct: 79  S----VVVAMVIYTQVILVRHFCVGLRSVEPAILEAAKGMGMNLWQRWWQVQVPLMLPIV 134

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES-TEKGSFPEVVLGVLIMCCF 565
           + G   A   A   + V      G       GLG  + +   + G + ++  G L +   
Sbjct: 135 LAGLRLAAIVAIAIATVGAKFGAG-------GLGTLLFDGIAQAGRYDKIWAGSLAVGSL 187

Query: 566 VLALNRFLWHPLYLYGTRC 584
            L +N  L      +  R 
Sbjct: 188 ALLVNTALLS--LEWAARR 204


>gi|50914290|ref|YP_060262.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|50903364|gb|AAT87079.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS10394]
          Length = 311

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               V+S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTVLSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLIGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 MRAIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    V+  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTVLSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLIGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + +            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       +  +
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPES 251


>gi|222081905|ref|YP_002541270.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726584|gb|ACM29673.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 207

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 73/203 (35%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  L +        + S++ I+L+ + +    AA+  R    +V +  ++ ++P L   
Sbjct: 7   NIDRLAEALLEHLYLVFSSVGIALVISLIVGIWAARKPRTFSAIVIVAGVLFAVPSLALF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +          + G    ++  +          ++      IPRD+ + +       
Sbjct: 67  ALLIPTLGIGAAPAITGLAAYSLMILIR--------NIGLGFQAIPRDVLDAAHGMGYGT 118

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++ W + +P ++P +V  + ++M       V    I      I   G+G  I   I ++
Sbjct: 119 IRRIWEIELPLAVPFIVGGIRIAM-------VTVIGIATVAAYINAGGLGVIIFEGIDQR 171

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               IL   L    +    D L 
Sbjct: 172 FPEKILAGGLLTSALALFTDYLF 194



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++ V   + IA +I + VGIW   +P   S I   A +L A P+   F L++  +     
Sbjct: 19  LYLVFSSVGIALVISLIVGIWAARKPRTFSAIVIVAGVLFAVPSLALFALLIPTLGIGAA 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L+   +      ++ N+  G  A P D  + A        R    I LP   P+ 
Sbjct: 79  PAITGLAAYSLMI----LIRNIGLGFQAIPRDVLDAAHGMGYGTIRRIWEIELPLAVPFI 134

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G   A       + V+   + G       GLG  I E  ++    +++ G L+     
Sbjct: 135 VGGIRIAMVTVIGIATVAAYINAG-------GLGVIIFEGIDQRFPEKILAGGLLTSALA 187

Query: 567 LALNRFL 573
           L  +   
Sbjct: 188 LFTDYLF 194


>gi|94988688|ref|YP_596789.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992511|ref|YP_600610.1| phosphate ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|94542196|gb|ABF32245.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94546019|gb|ABF36066.1| Phosphate transport system permease protein pstC [Streptococcus
           pyogenes MGAS2096]
          Length = 311

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 MRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|258425012|ref|ZP_05687883.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9635]
 gi|257844846|gb|EEV68889.1| glycine betaine/carnitine/choline ABC transporter opuCD
           [Staphylococcus aureus A9635]
          Length = 231

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   L     +  L  +  ++ + L       L A+  +L   ++ I +I+Q++P++  
Sbjct: 15  TNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 +  +F   +  +  + Y  + ++  ++++  +   ++
Sbjct: 75  LAILMLVMGLGL--------ETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSM 200
             Q    + +P S+  ++  + +++
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    +   V  ++ A++I IP+GI +     +S  +   A ++   P
Sbjct: 11  NYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIPLGILLARYTKLSGFVITIANIIQTVP 70

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                 +++  +          + L +       I+ N   G ++   + K+      +T
Sbjct: 71  VIAMLAILMLVMGLG----LETVVLTVFLYALLPIIKNTYTGIASVDANIKDAGKGMGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
             +  R I LP      + G   A 
Sbjct: 127 RNQVLRMIELPLSVSVIIGGIRIAL 151


>gi|188589990|ref|YP_001920543.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251780111|ref|ZP_04823031.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188500271|gb|ACD53407.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243084426|gb|EES50316.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 296

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 15/213 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATL--AAKSRRLGMVLVPILDIMQSIPIL--GFLTFT 119
           +   +T   + A+++S       A       S+    V+ P L+I+  IP +  G++  +
Sbjct: 76  FILGSTCVSIGAVILSAPIAIALAIFTNIISSKFGNKVIKPSLEILVGIPSVVYGWVGIS 135

Query: 120 VVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           V+  F+    G +  + L+ I  +    +  +      ++ NIP D  E S     + WQ
Sbjct: 136 VLVPFIKNNVGGMGFSLLSGILVLSLMILPTIATLAIDAIKNIPNDHIEASYGLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY---------- 228
               + VP +  G++  +++ ++  +   +A +M++     +P   + S           
Sbjct: 196 TISRVIVPGAKTGILTGVVLGIARAFGEALAVQMVIGNTVKLPDGLLSSMSTLTSIITMD 255

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +A  +        L+ +  +L VI     L+ R
Sbjct: 256 MANTVGGTLWNDALWTLALILLVISFIFILIVR 288



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 68/177 (38%), Gaps = 9/177 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
             ++  + +++   C+++  V++   IA  + I   I        +  I+P  ++L   P
Sbjct: 68  QPSFGALAFILGSTCVSIGAVILSAPIAIALAIFTNII--SSKFGNKVIKPSLEILVGIP 125

Query: 430 ANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEV 482
           + V+  + +S +          +  +L   +L++       +    I      PND  E 
Sbjct: 126 SVVYGWVGISVLVPFIKNNVGGMGFSLLSGILVLSLMILPTIATLAIDAIKNIPNDHIEA 185

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +     T W+    +I+PG     +TG +     A+  ++  ++     + L    L
Sbjct: 186 SYGLGATRWQTISRVIVPGAKTGILTGVVLGIARAFGEALAVQMVIGNTVKLPDGLL 242


>gi|319796476|ref|YP_004158116.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
 gi|315598939|gb|ADU40005.1| binding-protein-dependent transport systems inner membrane
           component [Variovorax paradoxus EPS]
          Length = 293

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 98/263 (37%), Gaps = 15/263 (5%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + L  +  KL R   ++R   P   + L        +L   W      +   I       
Sbjct: 22  ASLRAHEDKLRRRESLLRITVPAAIVVLL-------LLIWEWTVRANNIPHYILPAPSLI 74

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   F   D L        T+   ++ ++ A +  + + I       +   + P A +L 
Sbjct: 75  LKTLFDNWDTLSSALW--FTVKLTLLALLAAIVGGVLLAIAFALFKWVEIGLFPIAVILQ 132

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                     +   +  Y  +    L L       + IL N + G  +  ++ +++   +
Sbjct: 133 ----VTPIIAIAPLILIYVSSTTAALLLCAWIVAFFPILSNTVIGLKSADSNLRDLFQLY 188

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+ +RY++ P   PY++ G   A G +   ++V+E  +      + TGL + I ES
Sbjct: 189 KASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVVAEFTAG--TAGKETGLASRILES 246

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
           + +   P +   +L++    + +
Sbjct: 247 SFRTEIPMMFAALLLVSLLGIVI 269



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 88/234 (37%), Gaps = 10/234 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +L+I    +  + I    +P   + +  +  +  +L      T    L A++ +++
Sbjct: 46  IVVLLLLIWEWTVRANNIPHYILPAPSLILKTLFDNWDTLSSALWFTVKLTLLALLAAIV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A   A  + + + L PI  I+Q           ++    L    V     A +  
Sbjct: 106 GGVLLAIAFALFKWVEIGLFPIAVILQ--------VTPIIAIAPLILIYVSSTTAALLLC 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +    + +  +    L +   +L ++ + ++ S WQ F YL  P ++P  +  + ++  
Sbjct: 158 AWIVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGG 217

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V +E      T     G+ S I  +    ++  +  A+L +  +  + 
Sbjct: 218 LSLIGAVVAEF--TAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVI 269


>gi|260577238|ref|ZP_05845213.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259020547|gb|EEW23868.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 280

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 11/274 (4%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            SW  F+ +   V     +    R      +++L         + + W  V+ G+ +   
Sbjct: 1   MSWLIFAVVFWLVAWGVNSYAA-RVAGRNRWVRLFVPTLFGITVLVVWEAVIKGLQVSPI 59

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQ 419
                  +       +  +      T F+  +   +I     + V + I   P +   + 
Sbjct: 60  ILPPPSAIGAKLASSLPVLWGDLVQTFFKGALSGYLIGCGAAVLVAVAIDRSPFLQRGLL 119

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P    +AA P     P++V    +   +    + +++ F        N +AG SA     
Sbjct: 120 PVGNFVAALPIVGIAPIMVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLSASDRMQ 175

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++ +++  + W+    + LP   P+   G   A   A   +IV+E          T G+
Sbjct: 176 RDLMATWGASYWQGLWKLRLPAAMPFIFNGLKIAGTLALIGAIVAEFFGS-----PTRGM 230

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  I     +     +   + +      A    +
Sbjct: 231 GFRITAEIGQLGLDMIWAEIAVAALAGSAFYGLI 264



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 88/248 (35%), Gaps = 16/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R   P +F +   V+   +I  L         P  I   +  +L V  L     +T  + 
Sbjct: 32  RLFVPTLFGITVLVVWEAVIKGLQVSPIILPPPSAIGAKLASSLPV--LWGDLVQTFFKG 89

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS  +I      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K 
Sbjct: 90  ALSGYLIGCGAAVLVAVAIDRSPFLQRGLLPVGNFVAALPIVGIAPIMVMWFGFDWQSKA 149

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F +          +    L    R   ++  ++  S WQ  W L +P +MP 
Sbjct: 150 AVVVVMVFFPV--------LVNTVAGLSASDRMQRDLMATWGASYWQGLWKLRLPAAMPF 201

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P  G+G  I   I +  L  I   +      
Sbjct: 202 IFNGLKIAGTLALIGAIVAEFFGS-----PTRGMGFRITAEIGQLGLDMIWAEIAVAALA 256

Query: 252 IFLYDQLL 259
              +  L+
Sbjct: 257 GSAFYGLI 264


>gi|257439075|ref|ZP_05614830.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Faecalibacterium prausnitzii A2-165]
 gi|257198453|gb|EEU96737.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Faecalibacterium prausnitzii A2-165]
          Length = 272

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 22/257 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++    F  +    V+ +I ++ + + + +    I ++  ++          +R+ L  
Sbjct: 7   KKLAYPYFIWMVLFTVVPLIIVVYYALTDGSGNFTIANLTSVS----GYGSVFARSLLLA 62

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILD--IMQSIPILGFLTF-----T 119
           L A VI L+  F      ++ R       L +V++P+    ++++   +G L+       
Sbjct: 63  LVATVICLVIAFPVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSINGPVNA 122

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+ F  L P  ++    A +  +  + V  M   +Y S+  I + L E ++    S  Q 
Sbjct: 123 VLGFFGLGPYTMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGASTTQT 182

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDL 238
            + + +P S+PG+   + M         V S M+  G  ++    IG  I    +     
Sbjct: 183 LFRVLIPMSVPGISTGITMVFVPAVSTFVISRMLGGGSNLM----IGDLIEMQFLGNSYN 238

Query: 239 LAILYAMLTMLGVIFLY 255
           L +  AM  +L +I L 
Sbjct: 239 LNVGSAMSLVLMIIVLL 255



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 84/259 (32%), Gaps = 31/259 (11%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---TMFRVVVL 393
           +++++Y   I+         I + + ++     +FT  ++  V   G +   ++   +V 
Sbjct: 6   DKKLAYPYFIWMVLFTVVPLIIVVYYALTDGSGNFTIANLTSVSGYGSVFARSLLLALVA 65

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLW 451
            +I  +I  PVG ++         I     +L      ++   ++   ++  L       
Sbjct: 66  TVICLVIAFPVGYFLSRLRVNKQHIMLMLVML-----PMWMNFLLRTYAWMGLLSINGPV 120

Query: 452 LSLLMIFGTQWYILFNVIAGA--------------------SAFPNDFKEVASSFHITGW 491
            ++L  FG   Y + N                         +       E A     +  
Sbjct: 121 NAVLGFFGLGPYTMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGASTT 180

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKG 550
           +    +++P   P   TG       A +  ++S +   G   +    +   ++  S    
Sbjct: 181 QTLFRVLIPMSVPGISTGITMVFVPAVSTFVISRMLGGGSNLMIGDLIEMQFLGNSYNLN 240

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               + L ++I+    ++ 
Sbjct: 241 VGSAMSLVLMIIVLLCMSF 259


>gi|291456393|ref|ZP_06595783.1| putative ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
 gi|291381670|gb|EFE89188.1| putative ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
          Length = 259

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 86/246 (34%), Gaps = 15/246 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI P    +   ++V        H + E  +      I  +      L   A+ T    L
Sbjct: 11  RIAPPAITIGLLLVVWEAAVRAGH-VSERVLASPTQIIASMVRTWPDLMDAAAITAYEAL 69

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +   I+++   +       S+ L     P+L   Q+IP++      +++F          
Sbjct: 70  TGFAIAIVAGVLIGIGLYLSKTLHRAFYPLLVAAQTIPLITVAPLFMIWFG--------F 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  I  +    V+ +     + L  +P+  E+V+ +   +     W++ +  +   + 
Sbjct: 122 EPLGKIVIVAVFGVFPIAVQTARGLTAVPQFYEDVALTCGATRAWALWHVKLRVAARQIF 181

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +  +     +E +   +      G+G ++  A        I  A + ++    
Sbjct: 182 GGIRISAAYIFGTAATAEYLGAMN------GLGIWLQAAFNSFRTPLIFSATVVVIAETA 235

Query: 254 LYDQLL 259
           +   L+
Sbjct: 236 ILLGLI 241



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 72/236 (30%), Gaps = 10/236 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              +++        +L + W   V    +     +    +     +    ++    IT +
Sbjct: 7   SWLVRIAPPAITIGLLLVVWEAAVRAGHVSERVLASPTQIIASMVRTWPDLMDAAAITAY 66

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +    IA +  + +GI +     +     P        P     PL +    +  L  
Sbjct: 67  EALTGFAIAIVAGVLIGIGLYLSKTLHRAFYPLLVAAQTIPLITVAPLFMIWFGFEPLGK 126

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + +++  +F     I      G +A P  +++VA +   T      ++ L         
Sbjct: 127 IVIVAVFGVF----PIAVQTARGLTAVPQFYEDVALTCGATRAWALWHVKLRVAARQIFG 182

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           G   +    +  +  +E            GLG ++  +      P +    +++  
Sbjct: 183 GIRISAAYIFGTAATAEYLG------AMNGLGIWLQAAFNSFRTPLIFSATVVVIA 232


>gi|300022204|ref|YP_003754815.1| binding-protein-dependent transporters inner membrane component
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524025|gb|ADJ22494.1| binding-protein-dependent transport systems inner membrane
           component [Hyphomicrobium denitrificans ATCC 51888]
          Length = 270

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 81/260 (31%), Gaps = 25/260 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQ-------------SIGYIVNHFTYQDVLYVIWLGC 384
            R+   L   W  V         WQ              I                 L  
Sbjct: 10  GRLGRFLWSGWVGVAGMAVFCAIWQQGHEAYGDFILPSPIATAHATLELVRAPETWRLAW 69

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T  R V    + +I+   +G+ +G+        +P   ++   P   +  L +      
Sbjct: 70  ATSSRAVEGFFLVAILGGAMGLAVGYSAAAMRLARPLLTIIMGVPPIAWIVLAMIWFGST 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAF-PNDFKEVASSFHITGWRWWRYIILPGIF 503
                  + +       + ++F  +A A+A      +++A +F     +    I++  + 
Sbjct: 130 SGTVLATVVV-----ACFPLVFATVAEATATRDRALEDMARAFGAGPLQRLSTIVIRSVA 184

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
             Y      + G A+  ++++E+ +         G+G  +A +       + +  +++  
Sbjct: 185 GQYFPALAISLGSAFKVAVMAELLA------NINGIGIALAMARSNLDVAQSIAWIVLTV 238

Query: 564 CFVLALNRFLWHPLYLYGTR 583
             +  +   L  P+     R
Sbjct: 239 AAIFIVEYGLVQPIRAELER 258



 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 98/261 (37%), Gaps = 17/261 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTL 70
           R   + +  +A + V   I    H      +    +     TL++   P+    A  T+ 
Sbjct: 14  RFLWSGWVGVAGMAVFCAIWQQGHEAYGDFILPSPIATAHATLELVRAPETWRLAWATSS 73

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R +    +  +           S     +  P+L I+  +P + ++   +++F +     
Sbjct: 74  RAVEGFFLVAILGGAMGLAVGYSAAAMRLARPLLTIIMGVPPIAWIVLAMIWFGSTSGTV 133

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +    +A    +F +        + ++     R LE+++R+F     Q+   + +     
Sbjct: 134 LATVVVACFPLVFAT--------VAEATATRDRALEDMARAFGAGPLQRLSTIVIRSVAG 185

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
                + +S+   +   V +E++   +      GIG  +A+A    D+   +  ++  + 
Sbjct: 186 QYFPALAISLGSAFKVAVMAELLANIN------GIGIALAMARSNLDVAQSIAWIVLTVA 239

Query: 251 VIFLYDQLLFRPMIVWSNKFR 271
            IF+ +  L +P+     ++R
Sbjct: 240 AIFIVEYGLVQPIRAELERWR 260


>gi|18310468|ref|NP_562402.1| ABC transporter [Clostridium perfringens str. 13]
 gi|110801260|ref|YP_696173.1| ABC transporter, permease protein [Clostridium perfringens ATCC
           13124]
 gi|168216871|ref|ZP_02642496.1| ABC transporter, permease protein [Clostridium perfringens NCTC
           8239]
 gi|182624675|ref|ZP_02952456.1| ABC transporter, permease protein [Clostridium perfringens D str.
           JGS1721]
 gi|18145148|dbj|BAB81192.1| probable ABC transporter [Clostridium perfringens str. 13]
 gi|110675907|gb|ABG84894.1| ABC transporter, permease protein [Clostridium perfringens ATCC
           13124]
 gi|177910072|gb|EDT72466.1| ABC transporter, permease protein [Clostridium perfringens D str.
           JGS1721]
 gi|182381013|gb|EDT78492.1| ABC transporter, permease protein [Clostridium perfringens NCTC
           8239]
          Length = 251

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P      +   +  +   +    T  R   +  ++L+ 
Sbjct: 17  VILFILWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFFKIIISTLGRTFISFTLALVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A ++ +   ++PIL++M+S+P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + +        + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKVYEIGMGNLIKNIYLPSISFAICRIMVSTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 12/181 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              +   T+ R  +   +A +I + +G++  F  ++ + + P   ++ + P   F  L +
Sbjct: 55  FFKIIISTLGRTFISFTLALVIALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYI 497
             +S           +L+ F   + I ++ I GA      +  E+A  + I      + I
Sbjct: 115 IWLSQG------IAPILVGFVMSFPIFYDAIIGAILNIDKNILEMAKVYEIGMGNLIKNI 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP I        ++         +  EV           G+G  +       +   V  
Sbjct: 169 YLPSISFAICRIMVSTFSLTMKLVVGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFA 223

Query: 558 G 558
            
Sbjct: 224 W 224


>gi|302335609|ref|YP_003800816.1| ABC transporter related protein [Olsenella uli DSM 7084]
 gi|301319449|gb|ADK67936.1| ABC transporter related protein [Olsenella uli DSM 7084]
          Length = 466

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 9/204 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            RR+   +   L +VLV  + ++ +        P      +   +        A  T  R
Sbjct: 11  GRRVLRCLLVALLWVLVWQLASVAVGSELLLAGPLATAVRLAELIVTPDFWSVALGTLGR 70

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +     ++L+   + A L  + R L  V+   L +++S PI+  +   +++         
Sbjct: 71  VAMGFSLALVSASLLAALVWRFRSLEDVIELPLGVLKSAPIVCLIVLLLMW--------- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G+      A++ + + ++ F++ + L  +   L E+    R+S  ++      P  +P 
Sbjct: 122 LGSRSVVFVAVYIAVLPSLYFALVEGLRQLDPRLREMLCVHRVSAPRRLLAQLWPSLLPF 181

Query: 192 LVWNMMMSMSGGWFFVVASEMIVV 215
           L      +    W   VA+E++ +
Sbjct: 182 LQAACRSACGMAWKSGVAAELVGL 205



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 15/230 (6%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYV--IWLGCI-TMFRVVVLIIIASIIWIPVGIWI 408
           +  VA+G      G +       +++     W   + T+ RV +   +A +    +   +
Sbjct: 30  LASVAVGSELLLAGPLATAVRLAELIVTPDFWSVALGTLGRVAMGFSLALVSASLLAALV 89

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL-FN 467
                +   I+    +L + P      L++  +          +  + ++      L F 
Sbjct: 90  WRFRSLEDVIELPLGVLKSAPIVCLIVLLLMWLGSRS------VVFVAVYIAVLPSLYFA 143

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           ++ G        +E+     ++  R     + P + P+      +ACG AW + + +E+ 
Sbjct: 144 LVEGLRQLDPRLREMLCVHRVSAPRRLLAQLWPSLLPFLQAACRSACGMAWKSGVAAELV 203

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                 L    +G  + +S       ++    + +     A  R   H L
Sbjct: 204 G-----LPAASVGERVYQSKLLLETADLFSWTITVIVLSWACERVFLHVL 248


>gi|296446245|ref|ZP_06888192.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
 gi|296256282|gb|EFH03362.1| binding-protein-dependent transport systems inner membrane
           component [Methylosinus trichosporium OB3b]
          Length = 261

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 81/222 (36%), Gaps = 7/222 (3%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W   V G AI         ++     +D   +     +T+   +  + +A++  + + + 
Sbjct: 23  WEAGVRGFAIPTYVLPAPSLIAETLVKDREILFSALLVTLATALEALALATLGGVALALL 82

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           I     +   I PFA +L   P     PL++      +L P   + +       + IL N
Sbjct: 83  ISRSRALERAIMPFAIVLQVTPIIAIAPLLLV-----YLEPARAVLVCAFLVAFFPILAN 137

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G ++      E+   +  + WR    +  P   P ++TG     G +   +I +E+A
Sbjct: 138 ASLGLASVDRALVELFDLYRASPWRKLILLRAPAALPQFLTGLRIGGGLSLIGAIAAELA 197

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +              I+E+  +   P +   + ++    + +
Sbjct: 198 AGAAGQGAGLA--FRISEAGYRLDIPRMFAALALVSAAGVTI 237



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A L ++SR L   ++P   ++Q  PI+      +VY         +    A +   
Sbjct: 76  GVALALLISRSRALERAIMPFAIVLQVTPIIAIAPLLLVY---------LEPARAVLVCA 126

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +  +    L ++ R L E+   +R S W+K   L  P ++P  +  + +    
Sbjct: 127 FLVAFFPILANASLGLASVDRALVELFDLYRASPWRKLILLRAPAALPQFLTGLRIGGGL 186

Query: 203 G 203
            
Sbjct: 187 S 187


>gi|238753366|ref|ZP_04614729.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           ruckeri ATCC 29473]
 gi|238708319|gb|EEQ00674.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           ruckeri ATCC 29473]
          Length = 241

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 20/205 (9%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            L +L + VI+++          +   R    V+  ++ I Q+ P +  L   V      
Sbjct: 44  VLLVLVSSVIAIICGVATGIAVTRPAGREFRSVVETVVAIGQTFPPVAVLAIAVPVMG-- 101

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  +E  AI A+    +  +       + ++ + + EV++   +S  Q  W + +P
Sbjct: 102 ------FSEKPAIIALVLYGLLPILQGTLTGIESVSQSIREVAQGVGMSARQILWRVELP 155

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P +V  +  S+        A+    VG        +GS I + +   +   ++   L
Sbjct: 156 LAAPVMVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAL 208

Query: 247 TMLGVIFLYDQLLF---RPMIVWSN 268
            +  +  + D L     R +  W +
Sbjct: 209 VVALLAIITDMLFERWTRRLSAWRD 233



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           V+L++++S+I I  G+  G            S ++    +   FP      + V  + + 
Sbjct: 44  VLLVLVSSVIAIICGVATGIAVTRPAGREFRSVVETVVAIGQTFPPVAVLAIAVPVMGFS 103

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + L L  +      IL   + G  +     +EVA    ++  +    + LP   P
Sbjct: 104 EKPAIIALVLYGLL----PILQGTLTGIESVSQSIREVAQGVGMSARQILWRVELPLAAP 159

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V G  T+       + ++         + T  LG+ I       +   V+ G L++  
Sbjct: 160 VMVAGIRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGALVVAL 212

Query: 565 FVLALNRFL--W-HPLYLY 580
             +  +     W   L  +
Sbjct: 213 LAIITDMLFERWTRRLSAW 231


>gi|197104395|ref|YP_002129772.1| substrate-binding region of ABC-type glycine betaine transport
           system [Phenylobacterium zucineum HLK1]
 gi|196477815|gb|ACG77343.1| substrate-binding region of ABC-type glycine betaine transport
           system [Phenylobacterium zucineum HLK1]
          Length = 521

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           LP Y +   L   SA+++ +  +   A  A++S RL   ++    ++Q+IP L  L    
Sbjct: 12  LPDYLAWHVLLSGSALLLGVGISLPLAIAASRSARLRWPVLAFASLIQTIPSLALLALFY 71

Query: 121 VYF--------MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                           G      L ++ A+    +  +  +    L  +   + E +   
Sbjct: 72  PLLLALSALAHGLFGGGFSALGFLPSLLALTLYSMLPILRNTVAGLAGVDPAVREAADGL 131

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            ++  QK   + +P + P ++  +  +    W    A+    VG T      +G+YI   
Sbjct: 132 GMTAGQKLRQVELPLAAPVIMAGVRTA--AVWTIGAATLSTPVGQTS-----LGNYIFAG 184

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLF---------RPMIVW 266
           ++ ++ + +L+      G+    DQLL          RP++ W
Sbjct: 185 LQTENWVFVLFGCAASAGLALAADQLLGLVETALRLRRPLLGW 227



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS-----------CVSYYHLNP 448
           I +P+ I       +   +  FA L+   P+     L                       
Sbjct: 33  ISLPLAIAASRSARLRWPVLAFASLIQTIPSLALLALFYPLLLALSALAHGLFGGGFSAL 92

Query: 449 NLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               SLL +   +   IL N +AG +      +E A    +T  +  R + LP   P  +
Sbjct: 93  GFLPSLLALTLYSMLPILRNTVAGLAGVDPAVREAADGLGMTAGQKLRQVELPLAAPVIM 152

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            G  TA      A+ +S         +  T LG YI    +  ++  V+ G
Sbjct: 153 AGVRTAAVWTIGAATLS-------TPVGQTSLGNYIFAGLQTENWVFVLFG 196


>gi|220913300|ref|YP_002488609.1| binding-protein-dependent transporters inner membrane component
           [Arthrobacter chlorophenolicus A6]
 gi|219860178|gb|ACL40520.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 248

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +   + +       +    ++++IA+ I +P+G+++G        +   A
Sbjct: 8   TFAWLADPLHWSGSMGIPVRLAEHLQYTGLVMLIATAIAVPIGLFVGHTGKGRVAVVAVA 67

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P      L V       + P   L +L    T   +L    AG S+   +  + 
Sbjct: 68  GALRALPTLGLLTLFVLLAGIGLMPPVWALVIL----TVPPLLAGTYAGISSVDRNVVDA 123

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +      LP        G  T          V    + G       GLG Y
Sbjct: 124 ARAMGMTELQVLFRAELPNALTVMFGGFRTGVLQVVATVSVVAYINLG-------GLGRY 176

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF--LWHPLY 578
           + +      FP+++ G L++    +A++    L+  L+
Sbjct: 177 LFDGLVLSDFPQMLGGSLLIAVLAIAVDLVLALFQRLF 214



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 77/202 (38%), Gaps = 19/202 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L ++   T L ML A  I++            + +  + +V +   ++++P      
Sbjct: 25  PVRLAEHLQYTGLVMLIATAIAVPIGLFVG----HTGKGRVAVVAVAGALRALP------ 74

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L+        +  ++A+    V  +    Y  + ++ R++ + +R+  ++  
Sbjct: 75  --TLGLLTLFVLLAGIGLMPPVWALVILTVPPLLAGTYAGISSVDRNVVDAARAMGMTEL 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  +   +P ++  +       +      VVA+  +V     I L G+G Y+   +   D
Sbjct: 133 QVLFRAELPNALTVMFGGFRTGV----LQVVATVSVVA---YINLGGLGRYLFDGLVLSD 185

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +L   L +  +    D +L
Sbjct: 186 FPQMLGGSLLIAVLAIAVDLVL 207


>gi|206564221|ref|YP_002234984.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198040261|emb|CAR56246.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 255

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 18/250 (7%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            R   P      A + ++ ++ +    +Q    P    +  P+  D  SL          
Sbjct: 10  KRPSLPAYVARAAALALLLVLLLRPAWLQGLFAPFAD-NGAPVIYDRASLLDLTLAHLGT 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +  + +I  +          +        V   ++DI Q+ P +  L   V         
Sbjct: 69  VALSSLIGTIVAVSAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPAVGFGLKP 128

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +I   L  +  +F         S    L ++PRD+ + +R   +SGWQ+   + +P + 
Sbjct: 129 VLIALVLYGLLPVFE--------STIAGLEDVPRDVVDAARGMGMSGWQQLVSVELPLAF 180

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +V  + ++       VV +       + +   G+G  I   ++  +   +L   + + 
Sbjct: 181 PVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSNTAFVLQGGVIVG 233

Query: 250 GVIFLYDQLL 259
            +  L    +
Sbjct: 234 LLAVLVSDAI 243



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPAN 431
           D   ++ L    +  V +  +I +I+ +  GI +  RP  +  +   +    +   FP  
Sbjct: 54  DRASLLDLTLAHLGTVALSSLIGTIVAVSAGIAV-TRPFGADFLPVARSVVDIGQTFPPV 112

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L V  V +      + L L  +      +  + IAG    P D  + A    ++GW
Sbjct: 113 AVLALAVPAVGFGLKPVLIALVLYGLL----PVFESTIAGLEDVPRDVVDAARGMGMSGW 168

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    + LP  FP  V G   A        +++   +     +   GLG  I    +  +
Sbjct: 169 QQLVSVELPLAFPVIVNGIRLA-------VVINLGTATIGSTVAARGLGDVIIAGLQTSN 221

Query: 552 FPEVVLGVLIMCCFVLAL 569
              V+ G +I+    + +
Sbjct: 222 TAFVLQGGVIVGLLAVLV 239


>gi|21910416|ref|NP_664684.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28895992|ref|NP_802342.1| phosphate ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904614|gb|AAM79487.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28811242|dbj|BAC64175.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 311

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSAIVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 MRAIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  I+A+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMITGSFLVTILSAIVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + +            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPSS 251


>gi|119356867|ref|YP_911511.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354216|gb|ABL65087.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Chlorobium phaeobacteroides DSM 266]
          Length = 448

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       K      +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPVGVIAAVYFTEYAKEGFFNSMLRSANSTLAGVPSIVFGLFGLAFFINTMKVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++ ++P+  +E S S   + W     + +P ++PG
Sbjct: 293 SKSVLAGSLTLAIMILPTIIRAAEEAILSVPKTYKEASLSLGSTKWNTIVTVIIPAALPG 352

Query: 192 LVWNMMMSMSGG 203
           ++   ++S+   
Sbjct: 353 ILTGGIISLGRA 364



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 16/166 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISS 416
            G++ +      +   IW      F + +    A +   PVG+               +S
Sbjct: 203 WGFLTDSSLDSHIFGGIWPEIQGTFFLAIG---AMLFAFPVGVIAAVYFTEYAKEGFFNS 259

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----G 471
            ++     LA  P+ V F L         +  +   S+L    T   ++   I       
Sbjct: 260 MLRSANSTLAGVPSIV-FGLFGLAFFINTMKVSESKSVLAGSLTLAIMILPTIIRAAEEA 318

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             + P  +KE + S   T W     +I+P   P  +TG I + G A
Sbjct: 319 ILSVPKTYKEASLSLGSTKWNTIVTVIIPAALPGILTGGIISLGRA 364


>gi|254410386|ref|ZP_05024165.1| molybdate ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196182592|gb|EDX77577.1| molybdate ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 620

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 23/213 (10%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFT 119
           +P          L    ++ +F F+    AA+           ++D   ++P++  L  T
Sbjct: 1   MPYSDLSPLWISLKTAFVATIFAFLVGIAAARWMYGYRGKAKGLIDGFFTLPLV--LPPT 58

Query: 120 VVYFMNLYPGK---------------VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           V+ F+ L                   +I +  A + A        M  ++  +   I +D
Sbjct: 59  VIGFLLLLLLGRNSPVGQLLKQLGITIIFSWSATVIAATVVAFPLMYKTVLSAFKQIDKD 118

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPL 222
           L   +R+   S W+ FW + +P ++PG+V   +++ +       A+ M+          +
Sbjct: 119 LIHCARTLGASEWRIFWQILLPLALPGVVSGTILAFARALGEFGATLMLAGSIPGKTQTM 178

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           P     I  A +   +   L  +L M+ +  L 
Sbjct: 179 P---IAIFFAAEAGKMGEALNWVLLMVAIALLV 208



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 28/206 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWI-GFRPHISSKIQPFAQLLAAFPANVFFPLVVS---- 439
           I++    V  I A ++ I    W+ G+R      I  F  L       V  P V+     
Sbjct: 11  ISLKTAFVATIFAFLVGIAAARWMYGYRGKAKGLIDGFFTL-----PLVLPPTVIGFLLL 65

Query: 440 -----------CVSYYHLNPNLWLSLLMIFGTQ--WYILFNVIAGA-SAFPNDFKEVASS 485
                       +    +      S  +I  T   + +++  +  A      D    A +
Sbjct: 66  LLLGRNSPVGQLLKQLGITIIFSWSATVIAATVVAFPLMYKTVLSAFKQIDKDLIHCART 125

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW---GHIHLRTTGLGAY 542
              + WR +  I+LP   P  V+G I A   A      + + +    G        +  +
Sbjct: 126 LGASEWRIFWQILLPLALPGVVSGTILAFARALGEFGATLMLAGSIPGKTQTMPIAI-FF 184

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLA 568
            AE+ + G     VL ++ +   V+A
Sbjct: 185 AAEAGKMGEALNWVLLMVAIALLVIA 210


>gi|307331998|ref|ZP_07611090.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306882338|gb|EFN13432.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 176

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 59/166 (35%), Gaps = 10/166 (6%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+ +G      +  +PF   L A P     P+VV        +  +   L++ F     
Sbjct: 2   LGLVLGSFDFAGAVFRPFVVALNAVPRVALIPIVVVIFGIGLQSSIVIAFLVVFFVA--- 58

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
            LF+   GA       +  A     +GW     +  P    + ++    A   A  + + 
Sbjct: 59  -LFDAYEGARTVDAHVRHNARLLGASGWDIMWRVRFPYSLAWTLSSLPIALSFAIISVVT 117

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            E+ +       TTG+G  I  +T       V   ++++    L +
Sbjct: 118 GEILTG------TTGMGRLITTATNAADTSMVFAVIIVLSVCALLM 157



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 14/173 (8%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              +       G V  P +  + ++P +  +   VV F       ++ A L   F     
Sbjct: 2   LGLVLGSFDFAGAVFRPFVVALNAVPRVALIPIVVVIFGIGLQSSIVIAFLVVFFVAL-- 59

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                 F  Y+    +   +   +R    SGW   W +  P+S+   + ++ +++S    
Sbjct: 60  ------FDAYEGARTVDAHVRHNARLLGASGWDIMWRVRFPYSLAWTLSSLPIALSFAII 113

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            VV  E++          G+G  I  A    D   +   ++ +     L   +
Sbjct: 114 SVVTGEILTGTT------GMGRLITTATNAADTSMVFAVIIVLSVCALLMLWI 160


>gi|227872518|ref|ZP_03990856.1| ABC superfamily ATP binding cassette transporter permease
           [Oribacterium sinus F0268]
 gi|227841637|gb|EEJ51929.1| ABC superfamily ATP binding cassette transporter permease
           [Oribacterium sinus F0268]
          Length = 246

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ ++L+  +   L++       P + V  +   L          +++  +LSA ++S L
Sbjct: 10  IIFWLLLWELFAGLVNNSFLLVGPIESVKALSRLLQQQEFYGILWKSSRGILSAYLLSFL 69

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + + L+ ++  L   L P + +++S+P+  F+   + +         I   ++  F 
Sbjct: 70  LALILSYLSYRNSLLEDFLKPGVFVLRSLPVASFIIILLFFLGRDKLSFTISGFMS--FT 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           IF         ++ +        L E++  F  S +++  Y+ +P   P L+    ++M 
Sbjct: 128 IFY-------INLLEGFHKTDHKLLEMAEVFHFSLYRRLRYIHLPAVYPLLLGAAKLAMG 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             W   +A+E+I           IG  +  A    ++  +    + ++ +
Sbjct: 181 LSWKSGIAAELIGQVGKS-----IGYQLMEAKVGLEMADVFAWSIVIIAL 225



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +   ++P   +L + P   F  +++          +  +S  M F T +YI  N++
Sbjct: 80  RNSLLEDFLKPGVFVLRSLPVASF--IIILLFFLGRDKLSFTISGFMSF-TIFYI--NLL 134

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G     +   E+A  FH + +R  RYI LP ++P  +  A  A G +W + I +E+   
Sbjct: 135 EGFHKTDHKLLEMAEVFHFSLYRRLRYIHLPAVYPLLLGAAKLAMGLSWKSGIAAELIGQ 194

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                    +G  + E+       +V    +++   
Sbjct: 195 VGKS-----IGYQLMEAKVGLEMADVFAWSIVIIAL 225


>gi|11498585|ref|NP_069813.1| osmoprotection protein (proW-2) [Archaeoglobus fulgidus DSM 4304]
 gi|2649616|gb|AAB90261.1| osmoprotection protein (proW-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 218

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 82/219 (37%), Gaps = 15/219 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++H L +           ++ +S++   +   L  + R++  +    L+++++IP     
Sbjct: 15  ELHRLTERTLEHLYMFSVSLAVSVIVGVLLGVLIYRHRKIESLTFNALNVIETIP----- 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +  + L    +    +  I A     +  +  + Y  L  +  +  E++R+  +S 
Sbjct: 70  ---TLALLVLLLPILGLGMVPTIAACILYSILPIARNTYTGLVTVSEEYIEIARAIGMSE 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +    +  P ++P ++  + +++      V    +I  G    PL          I   
Sbjct: 127 REILLKVRFPLALPLIMGGIRIAVVFTMGVVTLGGLIAAGGLGAPL-------QTGIHLY 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
           D L IL A L +  +  L D        V S KFR E  
Sbjct: 180 DKLLILVAGLWVGILAVLLDAFAGAVERVLSRKFRGEYD 218



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 59/187 (31%), Gaps = 13/187 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   V + ++ I+ + +G+ I     I S       ++   P       ++  +     
Sbjct: 27  LYMFSVSLAVSVIVGVLLGVLIYRHRKIESLTFNALNVIETIPTLA----LLVLLLPILG 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              +      I  +   I  N   G      ++ E+A +  ++       +  P   P  
Sbjct: 83  LGMVPTIAACILYSILPIARNTYTGLVTVSEEYIEIARAIGMSEREILLKVRFPLALPLI 142

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A         +  + + G +     TG+  Y            +++  L +   
Sbjct: 143 MGGIRIAVVFTMGVVTLGGLIAAGGLGAPLQTGIHLY--------DKLLILVAGLWVGIL 194

Query: 566 VLALNRF 572
            + L+ F
Sbjct: 195 AVLLDAF 201


>gi|146276640|ref|YP_001166799.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145554881|gb|ABP69494.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 238

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 14/230 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +L +    + L  +    +P  +  +  +  +   L Q A+ T   +   + + +L    
Sbjct: 10  LLALWQAVVSLTAVPPFILPGPVAVLQAMGTNRGMLAQNAATTAAEIGLGLGLGVLTGLA 69

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A S RLG +L P+L I Q++P+        ++       KV    L   F + ++
Sbjct: 70  AGLATALSDRLGQILRPLLVISQALPVFALAPILTLWLGYGMGSKVAVVVLITFFPVASA 129

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                   ++  L   P    +++R  R   W++  +L +P ++P L   + ++      
Sbjct: 130 --------LHDGLRATPEAALDLARLARAPRWRELMWLRLPHALPHLAAALRIA------ 175

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            V A    V+G+ V    G+G  + LA        +  A+  +  +    
Sbjct: 176 AVYAPIGAVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAMTLCL 225



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 76/233 (32%), Gaps = 23/233 (9%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-------- 401
            V+ G+A+   WQ++  +     +     V  L  +   R ++    A+           
Sbjct: 3   AVLAGIALLALWQAVVSLTAVPPFILPGPVAVLQAMGTNRGMLAQNAATTAAEIGLGLGL 62

Query: 402 -----IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
                +  G+       +   ++P   +  A P     P++   + Y   +       ++
Sbjct: 63  GVLTGLAAGLATALSDRLGQILRPLLVISQALPVFALAPILTLWLGYGMGSK----VAVV 118

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +  T + +   +  G  A P    ++A       WR   ++ LP   P+       A   
Sbjct: 119 VLITFFPVASALHDGLRATPEAALDLARLARAPRWRELMWLRLPHALPHLAAALRIAAVY 178

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   +++ E          + GLG  +  +  +     +   + ++    L L
Sbjct: 179 APIGAVIGEWVG------SSAGLGHLMLLANARMKTDLMFAALAVLAAMTLCL 225


>gi|311894034|dbj|BAJ26442.1| putative ABC transporter permease protein [Kitasatospora setae
           KM-6054]
          Length = 287

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 15/179 (8%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G    ++    P+ ++L A P  V  P+ +        +      +L+ F       F
Sbjct: 112 ALGRIRFLADVFGPYIKVLNAIPRIVLAPIFLIWFGLGPASKVASAVVLVFFPVF----F 167

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   GA     +    A     +  +    +++P    +  T    + G A   +IV E 
Sbjct: 168 NAFQGAREVDRNLVANARILGASNRKVTLQVVIPAATTWIFTSLHVSFGFALIGAIVGEY 227

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                    T GLG  +A +    +   V   + I+    L     L      +  + L
Sbjct: 228 IG------ATKGLGLMVAAAQGTFNAAGVYAAMTILAVVALFTEGLL-----TFAEKRL 275



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 76/201 (37%), Gaps = 15/201 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL +    T    L+  VI ++   +      + R L  V  P + ++ +IP + 
Sbjct: 78  GTAQGSLGEQVGYTLYEALTGWVIGVVGGVLLGIALGRIRFLADVFGPYIKVLNAIPRIV 137

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +++F      KV  A +   F +         F+ +Q    + R+L   +R    
Sbjct: 138 LAPIFLIWFGLGPASKVASAVVLVFFPV--------FFNAFQGAREVDRNLVANARILGA 189

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P +   +  ++ +S        +  E I          G+G  +A A  
Sbjct: 190 SNRKVTLQVVIPAATTWIFTSLHVSFGFALIGAIVGEYIG------ATKGLGLMVAAAQG 243

Query: 235 EQDLLAILYAMLTMLGVIFLY 255
             +  A +YA +T+L V+ L+
Sbjct: 244 TFN-AAGVYAAMTILAVVALF 263


>gi|221368961|ref|YP_002520057.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Rhodobacter sphaeroides KD131]
 gi|221162013|gb|ACM02984.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Rhodobacter sphaeroides KD131]
          Length = 507

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 64/471 (13%), Positives = 139/471 (29%), Gaps = 68/471 (14%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RR+G V+  ++  +  +P++       V +      +V  A LA  F  +         +
Sbjct: 79  RRVGAVISLLMLFLFCLPLVATGPLLRVLWGPGLGPQVTLAALAVTFTSY--------LA 130

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   L   P    ++ RS+      + W++    ++P ++  + ++    +         
Sbjct: 131 LLVGLRAAPPVWLDLVRSYGRGRLSELWHVRARGALPYVMAGLQIAAPAAFL------GA 184

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           +VG+      G+G  +  A++E D+ A  + + T+   + +                   
Sbjct: 185 LVGEFTGAERGLGLLVIRALRELDVPA-TWGLATVAAGVTVASHAAI------------- 230

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
                                 R +        +      +     L  +          
Sbjct: 231 ------------------AAVGRRLSAEPPLILAAAPGRREGPLPVLAALALGLILWAGA 272

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           + +     +     W           A      +         L V   G +        
Sbjct: 273 MEAAGLSPFFAKRPWDVWAFLFTGPEAVAHRAELARAL--AQTLRVAVPGYLAGLLAGAG 330

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +    I+           P     + P A  L A P     PL+V  +          ++
Sbjct: 331 LAALVILA----------PRAEGAVLPVAVALRAVPIVTTAPLLVLALGRGPAGTVTIVA 380

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++ F      L   + G    P    ++  S+         +  LP + P +   A  A
Sbjct: 381 VMIFF----PTLVACLQGMRQTPRAVLDLFESYSAGRSARLLHAQLPAMLPAFFASARMA 436

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              A  A+  +E  + G      TGLGA +A +    ++  +    L++  
Sbjct: 437 VPAAILAATTAEWLATG------TGLGALMAVTASTSAYGMLWSATLVIAL 481



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +  ++T    +   +  LL     A L   + R    ++P+   ++++PI+     
Sbjct: 304 AELARALAQTLRVAVPGYLAGLLAGAGLAALVILAPRAEGAVLPVAVALRAVPIVTTAPL 363

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+       G V    +   F    + +        Q +   PR + ++  S+      
Sbjct: 364 LVLALGRGPAGTVTIVAVMIFFPTLVACL--------QGMRQTPRAVLDLFESYSAGRSA 415

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +  +  +P  +P    +  M++         +E +  G       G+G+ +A+       
Sbjct: 416 RLLHAQLPAMLPAFFASARMAVPAAILAATTAEWLATGT------GLGALMAVTASTSAY 469

Query: 239 LAILYAMLTMLGVIFL 254
             +  A L +     L
Sbjct: 470 GMLWSATLVIALAACL 485



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 11/156 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + I      L   P     PL+               +L + F +       ++ G
Sbjct: 79  RRVGAVISLLMLFLFCLPLVATGPLLRVLWGPGLGPQVTLAALAVTFTS----YLALLVG 134

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P  + ++  S+         ++   G  PY + G   A   A+  ++V E      
Sbjct: 135 LRAAPPVWLDLVRSYGRGRLSELWHVRARGALPYVMAGLQIAAPAAFLGALVGEF----- 189

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCCFV 566
                 GLG  +  +  +   P    L  +     V
Sbjct: 190 -TGAERGLGLLVIRALRELDVPATWGLATVAAGVTV 224


>gi|167645341|ref|YP_001683004.1| substrate-binding region of ABC-type glycine betaine transporte
           [Caulobacter sp. K31]
 gi|167347771|gb|ABZ70506.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Caulobacter sp. K31]
          Length = 515

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 15/181 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV--------VYFMNLYPGKVIGAELAA 138
             LAA+S RL    + +  ++Q+IP L  L            +       G      L +
Sbjct: 35  GVLAARSPRLRWPSLALAGLVQTIPSLALLALFYPLLLLLSNLAKTTFGHGFSALGFLPS 94

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    +  +  +    L  +   + E +R   ++  Q+ W + +P S+P ++  +  
Sbjct: 95  LLALTLYSMLPILRNTVAGLTGVDPAVVEAARGVGMTDRQRLWRVELPLSVPVIMAGVRT 154

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +    W    A+    VG T      +G YI   ++ ++   +L   +   G+  + DQL
Sbjct: 155 A--AVWTIGAATLSTPVGQTS-----LGDYIFSGLQTENWAMVLTGCVASAGLALVVDQL 207

Query: 259 L 259
           L
Sbjct: 208 L 208



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 436 LVVSCVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L  +   +         SLL +   +   IL N +AG +       E A    +T  +  
Sbjct: 77  LAKTTFGHGFSALGFLPSLLALTLYSMLPILRNTVAGLTGVDPAVVEAARGVGMTDRQRL 136

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   P  + G  TA      A+ +S         +  T LG YI    +  ++  
Sbjct: 137 WRVELPLSVPVIMAGVRTAAVWTIGAATLS-------TPVGQTSLGDYIFSGLQTENWAM 189

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+ G +      L +++ L
Sbjct: 190 VLTGCVASAGLALVVDQLL 208


>gi|289674692|ref|ZP_06495582.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae FF5]
          Length = 185

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 14/183 (7%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            IS L        A      G  L P+L ++  +P L  L    + F           EL
Sbjct: 1   GISALLGLCLGIAAGILPLCGAPLSPLLTVLSMVPPLAILPILFIVFGLG--------EL 52

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + +  I       +   + Q    IP +L   +++   S W     + +P  +P L+  +
Sbjct: 53  SKVMLIVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQLLPRLLIAL 112

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + +   W F++A+E I   D      G+G  I L  +   +  IL  ++ +  + +L D
Sbjct: 113 RLVLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYLAMDVILPYVVWITLLAWLMD 166

Query: 257 QLL 259
             L
Sbjct: 167 WGL 169



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I++++ + +GI  G  P   + + P   +L+  P     P++        L+      +L
Sbjct: 2   ISALLGLCLGIAAGILPLCGAPLSPLLTVLSMVPPLAILPILFIVFGLGELSK----VML 57

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ G    +  ++   A   P +    A +   + W     +ILP + P  +       G
Sbjct: 58  IVIGITPILARDLEQRAREIPVELLIKAQTLGASTWTLILRVILPQLLPRLLIALRLVLG 117

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            AW   I +E  +       T GLG  I       +   ++  V+ +      ++
Sbjct: 118 SAWLFLIAAEAIA------STDGLGYRIFLVRRYLAMDVILPYVVWITLLAWLMD 166


>gi|294631857|ref|ZP_06710417.1| ABC transporter, permease [Streptomyces sp. e14]
 gi|292835190|gb|EFF93539.1| ABC transporter, permease [Streptomyces sp. e14]
          Length = 287

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           GI +G    ++  + P+ ++L + P  V  P+ V       ++      +L+ F      
Sbjct: 112 GIALGRVAFLADVLGPYIKVLNSIPRIVLAPIFVIWFGLGPVSKVASAVVLVFFPVF--- 168

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            FN   GA     +    A     +  R    +++P    +  T    + G A   +IV 
Sbjct: 169 -FNAFQGAREVDRNLVSNARILGASDRRVTLQVVIPSATSWIFTSLHVSFGFALIGAIVG 227

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           E          T G+G  +A+S    +   V   ++I+    L     L      +  R 
Sbjct: 228 EYIG------ATKGIGLLVAQSQGTFNAAGVYAAMVILAAVALVAEGLL-----TFAERR 276

Query: 585 L 585
           +
Sbjct: 277 I 277



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
              + SL +    T    L   V+ ++   V      +   L  VL P + ++ SIP + 
Sbjct: 80  GTALGSLGEQIWYTLYEALLGWVVGVVAGVVLGIALGRVAFLADVLGPYIKVLNSIPRIV 139

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                V++F      KV  A +   F +         F+ +Q    + R+L   +R    
Sbjct: 140 LAPIFVIWFGLGPVSKVASAVVLVFFPV--------FFNAFQGAREVDRNLVSNARILGA 191

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  +    + +P +   +  ++ +S        +  E I          GIG  +A +  
Sbjct: 192 SDRRVTLQVVIPSATSWIFTSLHVSFGFALIGAIVGEYIG------ATKGIGLLVAQSQG 245

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
             +   +  AM+ +  V  + + LL    R +  W
Sbjct: 246 TFNAAGVYAAMVILAAVALVAEGLLTFAERRIFRW 280


>gi|225569524|ref|ZP_03778549.1| hypothetical protein CLOHYLEM_05617 [Clostridium hylemonae DSM
           15053]
 gi|225161732|gb|EEG74351.1| hypothetical protein CLOHYLEM_05617 [Clostridium hylemonae DSM
           15053]
          Length = 266

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 14/188 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T  R L   +      F+   L  + R    +  P++DI+++IP L    F +++F
Sbjct: 70  HVMATLGRYLLGTLAGTAVAFICLFLTVRFRSFQEIFDPLVDILRAIPPLALAPFFLLWF 129

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                    G     IF +FT     +  +  ++L  +     + +R+         + +
Sbjct: 130 GT----SQGGIIGIVIFYVFTM----IFVAGAEALKRLDPVQADFARTLGAGRTTVAYRV 181

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P  +P +   + ++ S  W  V+  E++          G+G  +   I       ++ 
Sbjct: 182 LLPSLLPSMAGPIKVACSWSWGLVIVGELLGAKS------GVGRILNAFIAILSTDLVVV 235

Query: 244 AMLTMLGV 251
            ++ +L +
Sbjct: 236 GIVWILIL 243



 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 51/182 (28%), Gaps = 10/182 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R ++  +  + +                   P   +L A P     P  +     
Sbjct: 72  MATLGRYLLGTLAGTAVAFICLFLTVRFRSFQEIFDPLVDILRAIPPLALAPFFLLWFGT 131

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                   +  ++IF     I                + A +           ++LP + 
Sbjct: 132 SQGG----IIGIVIFYVFTMIFVAGAEALKRLDPVQADFARTLGAGRTTVAYRVLLPSLL 187

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P        AC  +W   IV E+          +G+G  +       S   VV+G++ + 
Sbjct: 188 PSMAGPIKVACSWSWGLVIVGELLG------AKSGVGRILNAFIAILSTDLVVVGIVWIL 241

Query: 564 CF 565
             
Sbjct: 242 IL 243


>gi|148508197|gb|ABQ75986.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [uncultured haloarchaeon]
          Length = 280

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 81/202 (40%), Gaps = 18/202 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R+++  +IS++    +  +    + +   L   L ++ ++P + +    V++     
Sbjct: 80  TITRVVTGFMISMVLATFWGVIMGVQQSMTDYLAGPLFVLLTVPSVVWAFVGVLWLGLTE 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +   +  +F   T+ +W       +   ++  DL +++ ++       +  + +P 
Sbjct: 140 FAVPVLVIVLIVFPYLTTIIW-------EGTRDLNEDLLKMATTYDARRSHIWRDIYLPH 192

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P L   M + ++  W   + +E+           G+G  +    +  D   ++   + 
Sbjct: 193 IKPVLFGAMRVGLAVSWKLALVAEVFGTAT------GVGVAVNYHFEAFDTGMVIAWAIP 246

Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269
           ++GV+ + D+LL      WS +
Sbjct: 247 VMGVMIIADRLL-----RWSER 263



 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RVV   +I+ ++    G+ +G +  ++  +     +L   P+ V+  + V  +    
Sbjct: 80  TITRVVTGFMISMVLATFWGVIMGVQQSMTDYLAGPLFVLLTVPSVVWAFVGVLWLGLTE 139

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + + +L++F    Y+   +  G      D  ++A+++       WR I LP I P 
Sbjct: 140 FAVPVLVIVLIVFP---YLTTIIWEGTRDLNEDLLKMATTYDARRSHIWRDIYLPHIKPV 196

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL-IMCC 564
                      +W  ++V+EV          TG+G  +    E      V+   + +M  
Sbjct: 197 LFGAMRVGLAVSWKLALVAEVFG------TATGVGVAVNYHFEAFDTGMVIAWAIPVMGV 250

Query: 565 FVLALNRFLWHPLYLYGTR 583
            ++A        L  +  R
Sbjct: 251 MIIA------DRLLRWSER 263


>gi|116671386|ref|YP_832319.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611495|gb|ABK04219.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 248

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +    ++++IA+ I +P+G+++G        +   A
Sbjct: 8   TFAWLGDPLHWAGSSGIPARLAEHLQYTGLVMLIATAIAVPIGLYVGHTGRGRVAVVALA 67

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P      L V       + P   L +L    T   +L    AG ++   +  + 
Sbjct: 68  GALRALPTLGLLTLFVLLAGIGLMPPIWALVIL----TVPPLLAGTYAGIASVDRNVVDA 123

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +       P        G  T          V    + G       GLG Y
Sbjct: 124 ARAMGMTELQVLFRAEFPNALTVMFGGFRTGVLQVIATVSVVAYINLG-------GLGRY 176

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLY 580
           + +      FP+++ G L++    + ++  L  +  L+L+
Sbjct: 177 LFDGLVLSDFPQMLGGSLLIAALAITVDLLLAVFQRLFLF 216



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 76/202 (37%), Gaps = 19/202 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L ++   T L ML A  I++            + R  + +V +   ++++P      
Sbjct: 25  PARLAEHLQYTGLVMLIATAIAV----PIGLYVGHTGRGRVAVVALAGALRALP------ 74

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L+        +  I+A+    V  +    Y  + ++ R++ + +R+  ++  
Sbjct: 75  --TLGLLTLFVLLAGIGLMPPIWALVILTVPPLLAGTYAGIASVDRNVVDAARAMGMTEL 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  +    P ++  +       +      V+A+  +V     I L G+G Y+   +   D
Sbjct: 133 QVLFRAEFPNALTVMFGGFRTGV----LQVIATVSVVA---YINLGGLGRYLFDGLVLSD 185

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +L   L +  +    D LL
Sbjct: 186 FPQMLGGSLLIAALAITVDLLL 207


>gi|258592780|emb|CBE69089.1| ABC transporter, permease protein [NC10 bacterium 'Dutch sediment']
          Length = 249

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 89/238 (37%), Gaps = 13/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   L   +  + L        P  ++  +   L    L + A  T  R   A VI+ +
Sbjct: 12  LVLLALWAAVTGLGLVRPIFLPSPWRVLATLGALLADGPLWRDAGATLYRTGIAFVIAAI 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V         RL   +  I D  +S+P    +   ++ F        +G       A
Sbjct: 72  VGVVVGVPLGVWARLYESVEVIFDFFRSMPSPALIPLAMLLFG-------LGDLSRIAVA 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            FT  + N   + Y ++  IPR     +R    +G   F  + +P  +PGLV    +++S
Sbjct: 125 AFTCSLINAIQAAY-AVRTIPRYRVLGARIAGANGLFLFVRVLMPSVLPGLVAGWRITLS 183

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                VV SEM +   T     G+G  I           +  ++L +  + ++ ++++
Sbjct: 184 LSLIIVVVSEMFIGTRT-----GLGMRIYDFHLMFRSAEMYASVLVVGIIGYVLNKIV 236



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 21/237 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------------TMFRVVVLIII 396
              +  +A+  A   +G +   F       +  LG +            T++R  +  +I
Sbjct: 9   LGPLVLLALWAAVTGLGLVRPIFLPSPWRVLATLGALLADGPLWRDAGATLYRTGIAFVI 68

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A+I+ + VG+ +G    +   ++       + P+    PL +       L+     +   
Sbjct: 69  AAIVGVVVGVPLGVWARLYESVEVIFDFFRSMPSPALIPLAMLLFGLGDLSRIAVAAFTC 128

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                              P      A      G   +  +++P + P  V G       
Sbjct: 129 SLINA----IQAAYAVRTIPRYRVLGARIAGANGLFLFVRVLMPSVLPGLVAGWRITLSL 184

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +    +VSE+          TGLG  I +        E+   VL++      LN+ +
Sbjct: 185 SLIIVVVSEMFIG-----TRTGLGMRIYDFHLMFRSAEMYASVLVVGIIGYVLNKIV 236


>gi|83594784|ref|YP_428536.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83577698|gb|ABC24249.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 322

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 9/164 (5%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             P ++  + P A L  A P     P++V    +   +     + +++  T + +L N +
Sbjct: 151 RVPFLARGLLPIASLAGAVPIIGIAPIMVMWFGFDWPSK----AAVVVVMTLFPMLVNTL 206

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG  A   +  ++  S+     R    + LP   P+   G       A   +IV+E    
Sbjct: 207 AGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAALPFLFNGLKINATLALIGAIVAEFFGT 266

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     G+G  I+    + +   V   + +           L
Sbjct: 267 PIV-----GMGFRISTEVSRMNTDIVWASIAVAAVAGSGFYGLL 305



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 26/258 (10%)

Query: 23  LAFVLVIGIINILLHGIQ-------ETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLS 74
           LA  L+ G+  +    +        +  +P      + +     +L     +T LR  L+
Sbjct: 74  LAVPLLFGLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLWADFVQTVLRGALA 133

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V+  L   + A    +   L   L+PI  +  ++PI+G     V++F   +P K    
Sbjct: 134 GYVLGSLLGALLALACDRVPFLARGLLPIASLAGAVPIIGIAPIMVMWFGFDWPSKAA-- 191

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +    ++ M  +    L     +  ++ RS+     +    L +P ++P L  
Sbjct: 192 ------VVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAALPFLFN 245

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-- 252
            + ++ +      + +E         P+ G+G  I+  +   +   I++A + +  V   
Sbjct: 246 GLKINATLALIGAIVAEFFGT-----PIVGMGFRISTEVSRMN-TDIVWASIAVAAVAGS 299

Query: 253 --FLYDQLLFRPMIVWSN 268
             +    LL + +  W  
Sbjct: 300 GFYGLLALLEKRLTHWHP 317


>gi|126464414|ref|YP_001045527.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126106225|gb|ABN78755.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 507

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 65/477 (13%), Positives = 144/477 (30%), Gaps = 80/477 (16%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RR+G V+  ++  +  +P++       V +      +V  A LA  F  +         +
Sbjct: 79  RRVGAVISLLMLFLFCLPLVATGPLLRVLWGPGLGPQVTLAALAVTFTSY--------LA 130

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           +   L   P    ++ RS+      + W++    ++P ++  + ++    +         
Sbjct: 131 LLVGLRAAPPVWLDLVRSYGRGRLSELWHVRARGALPYVMAGLQIAAPAAFL------GA 184

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
           +VG+      G+G  +  A++E D  A  + + T+   + +                   
Sbjct: 185 LVGEFTGAERGLGLLVIRALRELDAPA-TWGLATVAAGVTVASH---------------- 227

Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
                                            + ++   ++L     +I    P     
Sbjct: 228 ---------------------------------AAIAAVGRRLSAEPPLILAAAPGRREG 254

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                    +  I W   +    +        W    ++            +        
Sbjct: 255 PLPVLAALALGLILWAGAMEAAGLSPFFAKRPWDVWAFLFTGPEAMAHRAELARALAQTL 314

Query: 389 RVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           RV V   +   +    +   +   P     + P A  L A P     PL+V  +      
Sbjct: 315 RVAVPGYLAGLLAGAGLAALVILAPRAEGAVLPVAVALRAIPIVTTAPLLVLALGRGPAG 374

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +++++ F      L   + G    P    ++  S+         +  LP + P + 
Sbjct: 375 TVTIVAVMIFF----PTLVACLQGMRQTPRAVLDLFESYSAGRGARLLHAQLPAMLPAFF 430

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             A  A   A  A+  +E  + G      TGLGA +A +    ++  +    L++  
Sbjct: 431 ASARMAVPAAILAATTAEWLATG------TGLGALMAVTASTSAYGMLWSATLVIAL 481



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +  ++T    +   +  LL     A L   + R    ++P+   +++IPI+     
Sbjct: 304 AELARALAQTLRVAVPGYLAGLLAGAGLAALVILAPRAEGAVLPVAVALRAIPIVTTAPL 363

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+       G V    +   F    + +        Q +   PR + ++  S+      
Sbjct: 364 LVLALGRGPAGTVTIVAVMIFFPTLVACL--------QGMRQTPRAVLDLFESYSAGRGA 415

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +  +  +P  +P    +  M++         +E +  G       G+G+ +A+       
Sbjct: 416 RLLHAQLPAMLPAFFASARMAVPAAILAATTAEWLATGT------GLGALMAVTASTSAY 469

Query: 239 LAILYAMLTMLG 250
             +  A L +  
Sbjct: 470 GMLWSATLVIAL 481



 Score = 38.8 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 11/156 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             + + I      L   P     PL+               +L + F +       ++ G
Sbjct: 79  RRVGAVISLLMLFLFCLPLVATGPLLRVLWGPGLGPQVTLAALAVTFTS----YLALLVG 134

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P  + ++  S+         ++   G  PY + G   A   A+  ++V E      
Sbjct: 135 LRAAPPVWLDLVRSYGRGRLSELWHVRARGALPYVMAGLQIAAPAAFLGALVGEF----- 189

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCCFV 566
                 GLG  +  +  +   P    L  +     V
Sbjct: 190 -TGAERGLGLLVIRALRELDAPATWGLATVAAGVTV 224


>gi|315645916|ref|ZP_07899037.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
 gi|315278677|gb|EFU41991.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus vortex V453]
          Length = 293

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 84/246 (34%), Gaps = 12/246 (4%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLG 383
               +   +     V+  + + W        +   + S    +   T+  +    ++   
Sbjct: 40  ERRRSRRIVWGRAAVAVFIFLVWEVFTRIGLLDSYYWSSPSAILGTTWTQMAEGTLLRDI 99

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T    ++  +  +++   +G+   +    +   +P+  +L A P     P++V  +  
Sbjct: 100 TYTSGSTILGFVFGTLLGALLGLSFWWSRSYAGISEPYLIILNAMPKLALAPVLVILLGI 159

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +       + +  +      +  +G  +   D +++  S      + +  +++P   
Sbjct: 160 GFFSKVALAFSMTVVVSA----LSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKVVVPWSM 215

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+ ++        A   +IV E  +       + G+G  I  +        V +GV+++ 
Sbjct: 216 PWIISSLRINIALALAGAIVGEFIA------SSQGVGRMIMYAGTILDINLVWVGVVVLS 269

Query: 564 CFVLAL 569
              + +
Sbjct: 270 LLSMVM 275



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 89/252 (35%), Gaps = 19/252 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLPQ 63
               RR    ++   A  + I ++  +   I        + P  I+      +   +L +
Sbjct: 38  AMERRRSRRIVWGRAAVAVFIFLVWEVFTRIGLLDSYYWSSPSAILGTTWTQMAEGTLLR 97

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + T+   +   V   L   +       SR    +  P L I+ ++P L      V+  
Sbjct: 98  DITYTSGSTILGFVFGTLLGALLGLSFWWSRSYAGISEPYLIILNAMPKLALAPVLVILL 157

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +         + +   F+  V     S Y  + ++  D+E++  S      Q F  +
Sbjct: 158 GIGF--------FSKVALAFSMTVVVSALSAYSGVKSVDPDMEKLMYSLGAKRHQVFTKV 209

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            VP+SMP ++ ++ ++++      +  E I          G+G  I  A    D+  +  
Sbjct: 210 VVPWSMPWIISSLRINIALALAGAIVGEFIASSQ------GVGRMIMYAGTILDINLVWV 263

Query: 244 AMLTMLGVIFLY 255
            ++ +  +  + 
Sbjct: 264 GVVVLSLLSMVM 275


>gi|153010835|ref|YP_001372049.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151562723|gb|ABS16220.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 295

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 89/279 (31%), Gaps = 17/279 (6%)

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +           +    ++++    + ++R       L        + ++D F+F    G
Sbjct: 14  VNASADELARTEAKFRADMRRRRAVVILVRLAILVAVLGGWELGARTGLIDPFFFASPSG 73

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +A       I   V   T Q  L       +T+    +  +I ++  +  GI +G    +
Sbjct: 74  IA-----DQIWIWVTEGTSQGPLS--EQIIVTLEETALGFLIGAVGGVICGILLGRNKFL 126

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +     + ++  + P  V   + +  +     +      +++ F        N   G   
Sbjct: 127 ADVFSIYIKIANSIPRVVLGSIFIIALGLGMASKVALAVVMVFFVVF----ANAFQGVRE 182

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                   A     +  +  R +I+P    + +     + G A   ++V E         
Sbjct: 183 ADRALIANAQILGASRSQITRTVIVPSAMSWILASLHVSFGFALVGAVVGEFLG------ 236

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              G+G  I+ +    +   V   ++I+    L +   +
Sbjct: 237 AKKGVGLMISTAQGTFNANGVFAAMVILAVLALVVEYII 275



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L +    T        +I  +   +   L  +++ L  V    + I  SIP + 
Sbjct: 85  GTSQGPLSEQIIVTLEETALGFLIGAVGGVICGILLGRNKFLADVFSIYIKIANSIPRVV 144

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  ++        KV  A +   F +F         + +Q +    R L   ++    
Sbjct: 145 LGSIFIIALGLGMASKVALAVVMVFFVVFA--------NAFQGVREADRALIANAQILGA 196

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q    + VP +M  ++ ++ +S     F +V +   VVG+ +    G+G  I+ A  
Sbjct: 197 SRSQITRTVIVPSAMSWILASLHVSFG---FALVGA---VVGEFLGAKKGVGLMISTAQG 250

Query: 235 EQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
             +   +  AM+ +  +  +      L+   ++ W
Sbjct: 251 TFNANGVFAAMVILAVLALVVEYIITLVENHLVKW 285


>gi|296111789|ref|YP_003622171.1| phosphate ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295833321|gb|ADG41202.1| phosphate ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 307

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 86/214 (40%), Gaps = 21/214 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L    A +I+  F    +        +R   ++ P+++++  IP + +    LT  V 
Sbjct: 90  SFLVTFLAAIIATPFAIGTSLFMTEIAQKRGAKIMQPVIELLVGIPSVVYGFIGLTVVVP 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++ G   G     I   F   +  +T     +L ++PR   E + +   + WQ  +
Sbjct: 150 TIRHIFGGSGFGILSGTIVL-FVMILPTITSMTVDTLKSVPRHYRESALAIGATRWQMIY 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGS 227
            + +  + PG++  ++  M+  +   +A +M++                 T +   GIG+
Sbjct: 209 KVVLRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPHNLISPASTLTSVLTMGIGN 268

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +  +++   L  +   +L M  V  L  + + R
Sbjct: 269 TVMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGR 302



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 82/232 (35%), Gaps = 23/232 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQL 424
           +VN  T Q  +  + +   +     +  IIA+   I   +++    +   +  +QP  +L
Sbjct: 71  VVNPQTKQPYIGALPMIIGSFLVTFLAAIIATPFAIGTSLFMTEIAQKRGAKIMQPVIEL 130

Query: 425 LAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPN 477
           L   P+ V+  + ++ V       +      +    +++F      +    +    + P 
Sbjct: 131 LVGIPSVVYGFIGLTVVVPTIRHIFGGSGFGILSGTIVLFVMILPTITSMTVDTLKSVPR 190

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH------ 531
            ++E A +   T W+    ++L    P  +T  +     A+  ++  ++           
Sbjct: 191 HYRESALAIGATRWQMIYKVVLRAATPGILTAIVFGMARAFGEALAVQMVIGNAALMPHN 250

Query: 532 --------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                     + T G+G  +  S +      + + +L+M      + R +  
Sbjct: 251 LISPASTLTSVLTMGIGNTVMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGR 302


>gi|254461882|ref|ZP_05075298.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2083]
 gi|206678471|gb|EDZ42958.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium HTCC2083]
          Length = 279

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               +QD +  +  G ++        II  +      + +     +   + P     AA 
Sbjct: 74  TSILWQDWVQTVLKGMMS------GYIIGCLAAFATALAVDRFDFLKRGLLPVGNFAAAL 127

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P++V    +   +    + +++ F     IL N + G +A     +++  ++  
Sbjct: 128 PIIGMAPILVMWFGFDWHSKAAVVVVMIFF----PILVNTVQGLAASDAMQRDLMRTYAA 183

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             W+    + +P   P+   G   A   A   +IV+E            G+G  I+ S  
Sbjct: 184 GYWKTLFKLRIPMALPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVG 238

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           + +   V   +++      AL
Sbjct: 239 QLALDLVWAEIVVAAITGSAL 259



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 19/261 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   ++   ++  L         P  I      +  +  L Q   +T L+ M+
Sbjct: 33  LVPIIFGVTLLIIWECVVRGLQIQQVLLPAPSVIAGRFVASTSI--LWQDWVQTVLKGMM 90

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  +I  L  F  A    +   L   L+P+ +   ++PI+G     V++F   +  K   
Sbjct: 91  SGYIIGCLAAFATALAVDRFDFLKRGLLPVGNFAAALPIIGMAPILVMWFGFDWHSKAA- 149

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   +     + +  +  Q L        ++ R++    W+  + L +P ++P + 
Sbjct: 150 -------VVVVMIFFPILVNTVQGLAASDAMQRDLMRTYAAGYWKTLFKLRIPMALPFIF 202

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P+ G+G  I+ ++ +  L  +   ++       
Sbjct: 203 NGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVGQLALDLVWAEIVVAAITGS 257

Query: 254 LY---DQLLFRPMIVWSNKFR 271
                  LL R    W    R
Sbjct: 258 ALYGAVALLERKWTFWHPSQR 278


>gi|123443079|ref|YP_001007053.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090040|emb|CAL12903.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 384

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + + +V ++           +S R  + +  IL+I+Q+IP +      +     L     
Sbjct: 184 LFATLVPAMFLGIPLGLFCFRSTRFQVAVFSILNIIQTIPSIALFGLLIAPLAGLAAAIP 243

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ +
Sbjct: 244 WLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLFFRV 303

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +V  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 304 QIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 356

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 357 GVIPVVVMAVVVDSLF 372



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  + IP+G++          +     ++   P+   F L+++ ++    
Sbjct: 181 LQILFATLVPAMFLGIPLGLFCFRSTRFQVAVFSILNIIQTIPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 241 AIPWLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  V+G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FRVQIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVVVMAVVVDSLF 372


>gi|333022882|ref|ZP_08450946.1| putative ABC transporter permease [Streptomyces sp. Tu6071]
 gi|332742734|gb|EGJ73175.1| putative ABC transporter permease [Streptomyces sp. Tu6071]
          Length = 434

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L  ++IS L     A +     R G + V + +I +++P         V  +
Sbjct: 237 LLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLANIGRAVPTFA------VLVL 290

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       +E   + A+    V  +  + Y  +  + R++   +R   ++G Q  W + 
Sbjct: 291 LLLTPVGKLSEGPTVIALVLFAVPPLLTNAYVGMRGVDREVVRAARGMGMTGRQLLWRVE 350

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  + ++
Sbjct: 351 LPLAAPLVLTGVRIA 365



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   +V ++I+ ++ +PV + +G      +     A
Sbjct: 217 TWDWLSDPAHWSGENGITHRLLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLA 276

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++       L+    +  L++F     +L N   G      +    
Sbjct: 277 NIGRAVPTFAVL-VLLLLTPVGKLSEGPTVIALVLF-AVPPLLTNAYVGMRGVDREVVRA 334

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 335 ARGMGMTGRQLLWRVELPLAAPLVLTGVRIAA 366


>gi|108803425|ref|YP_643362.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108764668|gb|ABG03550.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 235

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++ I+L  +     L A+ R+    +V +  ++ +IP L      V       PG  IG
Sbjct: 45  VSLAIALAVSLPTGVLVARYRKAYPPVVFLAGLLFTIPSLALFAILVTI-----PGVGIG 99

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              A I A+    +  +  +    L ++P +  + +R   L+  Q  + + +P ++P +V
Sbjct: 100 PN-AVIIALVAYSILVLVRNTVAGLDSVPPETIDAARGMGLTPRQILFKVELPLALPVIV 158

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++        V    I      I   G+G  I   I       I+        +  
Sbjct: 159 AGVRIA-------TVTVIGIATIGAYIAGGGLGQLIFDGIDRLFPTMIIAGAALATALAV 211

Query: 254 LYDQL---LFRPMIVWSNK 269
             D +   L R +  W+ +
Sbjct: 212 AADVVLSSLERYLRPWAQR 230



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 9/159 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V + IA  + +P G+ +         +   A LL   P+   F ++V  +    + PN  
Sbjct: 45  VSLAIALAVSLPTGVLVARYRKAYPPVVFLAGLLFTIPSLALFAILV-TIPGVGIGPNAV 103

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  L+ + +   ++ N +AG  + P +  + A    +T  +    + LP   P  V G  
Sbjct: 104 IIALVAY-SILVLVRNTVAGLDSVPPETIDAARGMGLTPRQILFKVELPLALPVIVAGVR 162

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            A       + +    + G       GLG  I +  ++ 
Sbjct: 163 IATVTVIGIATIGAYIAGG-------GLGQLIFDGIDRL 194


>gi|256393086|ref|YP_003114650.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256359312|gb|ACU72809.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 289

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 11/202 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T F VVV   I     I +G+ +G        ++P    +   P     PL V       
Sbjct: 89  TAFEVVVGFAIGVAAGIVMGLVLGSFRLAGRVMEPLVAAVNGVPKIALAPLFVLFFGIG- 147

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +     +   G  + + +NV  G      +  E+             Y+ +P +   
Sbjct: 148 ---SWSKIYIAATGVAFVVFYNVYLGLRLRERELVEIIQVMGGRRHHVLSYVTIPTLAAP 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +     T    A    I  E  +       + G+G  +  S            + ++   
Sbjct: 205 FFAALKTGGPLAILGVIGGEFIA------ASQGVGHELFNSAMNLDAAGEFASLAVLMGM 258

Query: 566 VLALNRFLWHPLYLYGTRCLRL 587
            L LN  L   L  Y  R L L
Sbjct: 259 TLILNSVL-TTLDKYALRRLGL 279



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P  +   +   L   S       T   ++    I +    V   +    R  G V+ P++
Sbjct: 66  PTQVWRALRALLSSSSGWTDIETTAFEVVVGFAIGVAAGIVMGLVLGSFRLAGRVMEPLV 125

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
             +  +P +      V++F      K+  A     F +F         ++Y  L    R+
Sbjct: 126 AAVNGVPKIALAPLFVLFFGIGSWSKIYIAATGVAFVVFY--------NVYLGLRLRERE 177

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L E+ +           Y+ +P         +          V+  E I          G
Sbjct: 178 LVEIIQVMGGRRHHVLSYVTIPTLAAPFFAALKTGGPLAILGVIGGEFIAASQ------G 231

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G  +  +    D      ++  ++G+  + + +L
Sbjct: 232 VGHELFNSAMNLDAAGEFASLAVLMGMTLILNSVL 266


>gi|167756090|ref|ZP_02428217.1| hypothetical protein CLORAM_01610 [Clostridium ramosum DSM 1402]
 gi|237734074|ref|ZP_04564555.1| ABC phosphate transporter [Mollicutes bacterium D7]
 gi|167704082|gb|EDS18661.1| hypothetical protein CLORAM_01610 [Clostridium ramosum DSM 1402]
 gi|229382900|gb|EEO32991.1| ABC phosphate transporter [Coprobacillus sp. D7]
          Length = 286

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 75/183 (40%), Gaps = 6/183 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +LV+ I  IL  G+        I     +   V  LP     T   ++  ++I+  
Sbjct: 26  LSVLILVVCIGYILYRGLPYFNFSYLINTTSILKGTVGILPN-IINTLYIIVITLLIACP 84

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK+++   ++    +++  IP + +  F +++F NL   K   + L  
Sbjct: 85  IGIGGAIYLNEYAKNKKFVNIISFTTEVLAGIPSIIYGLFGMLFFGNLLGFKF--SILTG 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +    +  +T +   +L  +P+   E +     + W     + +P +MPG++  +++
Sbjct: 143 SFTLAIMILPIITRNTQVALEGVPKSYREAALGIGATKWYMIRTVLLPSAMPGILTGVIL 202

Query: 199 SMS 201
            M 
Sbjct: 203 GMG 205



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 92/265 (34%), Gaps = 16/265 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWL 382
           R    +  L        +  + I   C+   +  G+ + +  Y++N  +  +  + ++  
Sbjct: 8   RHRSSDKILNFLIQLSSALSVLILVVCIGYILYRGLPYFNFSYLINTTSILKGTVGILPN 67

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
              T++ +V+ ++IA  I I   I++          + I    ++LA  P+ ++    + 
Sbjct: 68  IINTLYIIVITLLIACPIGIGGAIYLNEYAKNKKFVNIISFTTEVLAGIPSIIYGLFGML 127

Query: 440 CVS-YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                     ++      +      I+  N        P  ++E A     T W   R +
Sbjct: 128 FFGNLLGFKFSILTGSFTLAIMILPIITRNTQVALEGVPKSYREAALGIGATKWYMIRTV 187

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------IHLRTTG--LGAYIAEST 547
           +LP   P  +TG I   G     S      +            HL ++G  L   +    
Sbjct: 188 LLPSAMPGILTGVILGMGRIVAESAALLFTAGSVSVLPKNIFTHLSSSGATLTIQLYLEM 247

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
            K ++    +  L++   VL LN  
Sbjct: 248 AKANYESAFVIALVLIVIVLGLNML 272


>gi|300716568|ref|YP_003741371.1| ABC transporter permease [Erwinia billingiae Eb661]
 gi|299062404|emb|CAX59521.1| ABC-type transport systems, permease components [Erwinia billingiae
           Eb661]
          Length = 238

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 88/239 (36%), Gaps = 27/239 (11%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA + +  +I +L++G          + +  I      L     +  + +  +M+ +LL 
Sbjct: 12  LAVLFLAVVIGLLVYG----------LGVESIKARQVDLVYLGQQHMMLVFWSMLFALLV 61

Query: 83  TFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                 + ++   R+    ++ I ++  ++P L  L   +V                AI 
Sbjct: 62  GIPSGIILSRPAARKWAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDRP--------AII 113

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+F + +  +  + Y  LC++P  L E +    ++  Q+   + +P + P ++  +   +
Sbjct: 114 ALFLASLLPIVRNTYSGLCSVPASLIEAANGIGMTKGQRLRKVELPNAWPVMLSGIR--V 171

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +       A    ++G +       G  I   I   D   ++           + D LL
Sbjct: 172 ATAINVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGAAATALFALILDMLL 225



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 14/232 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L       V  +A+ I     G  V     + V  +++LG   M  V   ++ A ++ IP
Sbjct: 6   LLRRAALAVLFLAVVIGLLVYGLGVESIKARQV-DLVYLGQQHMMLVFWSMLFALLVGIP 64

Query: 404 VGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
            GI +        +  +     +    P      L +  +            + +   + 
Sbjct: 65  SGIILSRPAARKWAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDR----PAIIALFLASL 120

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ N  +G  + P    E A+   +T  +  R + LP  +P  ++G   A       +
Sbjct: 121 LPIVRNTYSGLCSVPASLIEAANGIGMTKGQRLRKVELPNAWPVMLSGIRVATAINVGTA 180

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++ +          +  G  I        FP ++LG      F L L+  L
Sbjct: 181 PLAFLIG-------ASSYGELIFPGIYLNDFPTLILGAAATALFALILDMLL 225


>gi|302557624|ref|ZP_07309966.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           griseoflavus Tu4000]
 gi|302475242|gb|EFL38335.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           griseoflavus Tu4000]
          Length = 230

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +   LL     A L  + R L   ++    ++ +IP L F    + Y          
Sbjct: 27  LLPVAAGLLLALPVAQLCGRFRWLYPPVLGTTTVLYAIPSLAFFVVLIDYTGQ------- 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             EL  +  +    +  +  ++   + ++P +    + +  L   +++  + +P + P +
Sbjct: 80  -TELTVMIPLALYSLVVLVPAIVDGVRSVPDETLTAATAMGLGPVRRYLQVQLPIAAPAI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + ++ +          ++ VG  +     +G+ +A A K       + A+LTM  + 
Sbjct: 139 VAGLRVATASS------ISLVSVGALIGNQGALGNLLAAAQKYDRPELAVNAVLTMAVLA 192

Query: 253 FLYDQLL 259
            L D LL
Sbjct: 193 ILCDALL 199



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 12/205 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIAS--IIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           F     L   W G I +     L+ +A+  ++ +PV    G    +   +     +L A 
Sbjct: 5   FDIPSDLQNSWAGLIGVHMREALLPVAAGLLLALPVAQLCGRFRWLYPPVLGTTTVLYAI 64

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  FF +++       L   + L+L  +      I    + G  + P++    A++  +
Sbjct: 65  PSLAFFVVLIDYTGQTELTVMIPLALYSLVVLVPAI----VDGVRSVPDETLTAATAMGL 120

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              R +  + LP   P  V G   A   + +   V  +            LG  +A + +
Sbjct: 121 GPVRRYLQVQLPIAAPAIVAGLRVATASSISLVSVGALIGNQGA------LGNLLAAAQK 174

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                  V  VL M    +  +  L
Sbjct: 175 YDRPELAVNAVLTMAVLAILCDALL 199


>gi|168208030|ref|ZP_02634035.1| ABC transporter, permease protein [Clostridium perfringens E str.
           JGS1987]
 gi|170660677|gb|EDT13360.1| ABC transporter, permease protein [Clostridium perfringens E str.
           JGS1987]
          Length = 251

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P      +   +  +   +    T  R   +  ++L+ 
Sbjct: 17  VILFILWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFFKIIISTLGRTFISFTLALVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A ++ +   ++PIL++M+S+P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + +        + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKVYEIGIGNLIKNIYLPSISFAICRIMVSTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 12/181 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              +   T+ R  +   +A +I + +G++  F  ++ + + P   ++ + P   F  L +
Sbjct: 55  FFKIIISTLGRTFISFTLALVIALFLGVFSAFNKYVYNFMIPILNVMRSLPTIGFIILAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYI 497
             +S           +L+ F   + I ++ I GA      +  E+A  + I      + I
Sbjct: 115 IWLSQG------IAPILVGFVMSFPIFYDAIIGAILNIDKNILEMAKVYEIGIGNLIKNI 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP I        ++         +  EV           G+G  +       +   V  
Sbjct: 169 YLPSISFAICRIMVSTFSLTMKLVVGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFA 223

Query: 558 G 558
            
Sbjct: 224 W 224


>gi|169347211|ref|ZP_02866150.1| ABC transporter, permease protein [Clostridium perfringens C str.
           JGS1495]
 gi|169296607|gb|EDS78738.1| ABC transporter, permease protein [Clostridium perfringens C str.
           JGS1495]
          Length = 251

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P      +   +  +   +    T  R   +  ++L+ 
Sbjct: 17  VILFILWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFLKIIISTLGRTFISFTLALVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                  +A ++ +   +VPIL++M+S+P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFSAFNKYVYNFMVPILNVMRSLPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + +        + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKIYEIGIGNLIKNIYLPSISFAICRIMVSTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 15/217 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +    +   V +   + +   ++      D L +I     T+ R  +   +A +I +
Sbjct: 22  LWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFLKII---ISTLGRTFISFTLALVIAL 78

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            +G++  F  ++ + + P   ++ + P   F  L +  +S           +L+ F   +
Sbjct: 79  FLGVFSAFNKYVYNFMVPILNVMRSLPTIGFIILALIWLSQG------IAPILVGFVMSF 132

Query: 463 YILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            I ++ I GA      +  E+A  + I      + I LP I        ++         
Sbjct: 133 PIFYDAIIGAILNIDKNILEMAKIYEIGIGNLIKNIYLPSISFAICRIMVSTFSLTMKLV 192

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +  EV           G+G  +       +   V   
Sbjct: 193 VGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFAW 224


>gi|309792449|ref|ZP_07686914.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308225521|gb|EFO79284.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 282

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 10/154 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I       +     P+  +    P+    PL+V  +           +L       + +L
Sbjct: 111 ILFVAIRPLERAFYPWVLVSQTLPSAALAPLLVIWLGNGLAPRLAMAALF----AFFPVL 166

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G      + +++  ++  +  + +R + +P   P    G   A   A   +IV E
Sbjct: 167 VNTTQGLRQITPEQRDLLHAWGASSLQTFRLLRIPAALPALFAGLRIAATLAVVGAIVGE 226

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           +A        + GLG  I+ +T       V   V
Sbjct: 227 LAG------SSEGLGYVISIATYHLQTDRVFAAV 254



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 14/187 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L  +   T    +  +V+  +   + A L    R L     P + + Q++P       
Sbjct: 82  SGLAGHLWATAQAGVGGLVLGSVGGVLLAILFVAIRPLERAFYPWVLVSQTLPSAALAPL 141

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++  N    ++  A L A F +          +  Q L  I  +  ++  ++  S  Q
Sbjct: 142 LVIWLGNGLAPRLAMAALFAFFPVLV--------NTTQGLRQITPEQRDLLHAWGASSLQ 193

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  L +P ++P L   + ++       VV +   +VG+      G+G  I++A      
Sbjct: 194 TFRLLRIPAALPALFAGLRIA---ATLAVVGA---IVGELAGSSEGLGYVISIATYHLQT 247

Query: 239 LAILYAM 245
             +  A+
Sbjct: 248 DRVFAAV 254


>gi|218283061|ref|ZP_03489156.1| hypothetical protein EUBIFOR_01742 [Eubacterium biforme DSM 3989]
 gi|218216130|gb|EEC89668.1| hypothetical protein EUBIFOR_01742 [Eubacterium biforme DSM 3989]
          Length = 253

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 16/237 (6%)

Query: 22  LLAFVLVIGI--INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           LL F+LVIG   + +    I    +P     I  +  ++  L Q++  T    +  ++IS
Sbjct: 11  LLVFILVIGGWELYVRAFDISLYILPSPSKIISALIENMDILMQHSLVTLEESVLGLLIS 70

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
             F  V +     S+     + P L + Q++PI+       ++F            L  +
Sbjct: 71  TFFAIVISIGMDLSKTFKTSIYPYLIVTQTVPIMVLGPLFSIWFGFDL--------LPKV 122

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +     + +  S   +L  +      + +SF  + +Q +  + +P    GL   + ++
Sbjct: 123 LIVIFMCFFPIAISFTDALSQVSEKEINLLKSFGANLFQIYKIVKIPSGAIGLFSGLKVA 182

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                         +VG+ +    G+G Y+        L  +   +L ++    L +
Sbjct: 183 ------ATYCVGGAIVGEWLSSRAGLGYYMLRVKNGYMLDKVFACVLMIIFWSILLN 233



 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 16/243 (6%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT------YQDVLYVIWLGCITM 387
           +  N+R+   L +F   +        A+    YI+   +       +++  ++    +T+
Sbjct: 1   MKKNRRIVMPLLVFILVIGGWELYVRAFDISLYILPSPSKIISALIENMDILMQHSLVTL 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
              V+ ++I++   I + I +       + I P+  +    P  V  PL      +    
Sbjct: 61  EESVLGLLISTFFAIVISIGMDLSKTFKTSIYPYLIVTQTVPIMVLGPLFSIWFGF---- 116

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L   L++IF   + I  +     S        +  SF    ++ ++ + +P       
Sbjct: 117 DLLPKVLIVIFMCFFPIAISFTDALSQVSEKEINLLKSFGANLFQIYKIVKIPSGAIGLF 176

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +G   A       +IV E  S         GLG Y+          +V   VL++  + +
Sbjct: 177 SGLKVAATYCVGGAIVGEWLS------SRAGLGYYMLRVKNGYMLDKVFACVLMIIFWSI 230

Query: 568 ALN 570
            LN
Sbjct: 231 LLN 233


>gi|121610087|ref|YP_997894.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121554727|gb|ABM58876.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 298

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 6/189 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T+   ++ +  A +  + + I       +   + P A +L           +   +  Y
Sbjct: 96  FTVRLTLLALAAAIVGGVLLAIAFALFKWVEIGLFPIAVILQ----VTPIIAIAPLILIY 151

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             N    L L       + IL N + G  +   + +++   +  + W+ +RY++ P   P
Sbjct: 152 VPNTTAALLLCAWIVAFFPILSNTVIGLKSADRNLRDLFWLYRASPWQTFRYLLAPSALP 211

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y++ G   A G +   ++V+E  +      + TGL + I ES+ +   P +   +L++  
Sbjct: 212 YFMAGLKIAGGLSLIGAVVAEFTAG--TAGKETGLASRILESSFRTEIPMMFAALLLVSL 269

Query: 565 FVLALNRFL 573
             + +    
Sbjct: 270 LGIVIFVLF 278



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 10/224 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
            H I    +P   + +  +     SL      T    L A+  +++   + A   A  + 
Sbjct: 65  AHRIPHYILPAPSLILRTLFEHWDSLSSALWFTVRLTLLALAAAIVGGVLLAIAFALFKW 124

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           + + L PI  I+Q           ++    L    V     A +   +    + +  +  
Sbjct: 125 VEIGLFPIAVILQ--------VTPIIAIAPLILIYVPNTTAALLLCAWIVAFFPILSNTV 176

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L +  R+L ++   +R S WQ F YL  P ++P  +  + ++        V +E    
Sbjct: 177 IGLKSADRNLRDLFWLYRASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVVAEF--T 234

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             T     G+ S I  +    ++  +  A+L +  +  +   L 
Sbjct: 235 AGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFVLF 278


>gi|224826299|ref|ZP_03699401.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
 gi|224601400|gb|EEG07581.1| binding-protein-dependent transport systems inner membrane
           component [Lutiella nitroferrum 2002]
          Length = 271

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R    +L  +L + QS P +  L                  E  A+ A+    V  +   
Sbjct: 93  RAFRPLLESLLAMSQSFPPVAVLAVAAPLIG--------FGEAPALIALVLYGVLPIAQG 144

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L  +P    EV++    + WQ  W + +P + P ++  +  S       VV +   
Sbjct: 145 TLAGLDAVPAATREVAQGLGFAPWQALWRVELPLAAPVILAGVRTS-------VVINIGT 197

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
               + +    +GS I + +   +   ++   + +  +    DQL     R +  W  
Sbjct: 198 ATIASTVGAKTLGSPIIVGLSGFNTAYVIQGAVLVALLAICCDQLFERLQRRLSAWQP 255



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 18/180 (10%)

Query: 408 IGFRPHISSKIQPFAQLL----AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +          +P  + L     +FP      +    + +      + L L  +      
Sbjct: 85  LAVCRPAGRAFRPLLESLLAMSQSFPPVAVLAVAAPLIGFGEAPALIALVLYGVL----P 140

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I    +AG  A P   +EVA       W+    + LP   P  + G  T+       + +
Sbjct: 141 IAQGTLAGLDAVPAATREVAQGLGFAPWQALWRVELPLAAPVILAGVRTSVVINIGTATI 200

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF---LWHPLYLY 580
           +         +    LG+ I       +   V+ G +++    +  ++    L   L  +
Sbjct: 201 A-------STVGAKTLGSPIIVGLSGFNTAYVIQGAVLVALLAICCDQLFERLQRRLSAW 253


>gi|184155423|ref|YP_001843763.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183226767|dbj|BAG27283.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 227

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 17/196 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
             Y  +  +   S +VI++L +     L +K  ++ ++      +++ IP         +
Sbjct: 30  WGYVGQHLVLSFSVLVIAILISLPLGYLGSKHPKVALICSSFSQVLRIIPS--------L 81

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + L    +    + A  A+    +  +  +       +    +EV  +  ++  Q  W
Sbjct: 82  GLLFLLIPLIGTGVVPAGIALVILAIPPILINTILGFNEVGTIYQEVGVALGMNERQLLW 141

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + VP ++P L+  + +++      ++AS  +    T I   G+G+ I   +   D+  +
Sbjct: 142 QVKVPLALPYLLNGIKLAL----IEIIASATLA---TYIGAGGLGTLIFTGLGLYDMADV 194

Query: 242 LY--AMLTMLGVIFLY 255
           +   A + ML +I + 
Sbjct: 195 IIGGASVAMLSLITMV 210



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++IA +I +P+G      P ++     F+Q+L   P+     L++  +    +   + L 
Sbjct: 44  LVIAILISLPLGYLGSKHPKVALICSSFSQVLRIIPSLGLLFLLIPLIGTGVVPAGIALV 103

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +L I      IL N I G +     ++EV  +  +   +    + +P   PY + G   A
Sbjct: 104 ILAIP----PILINTILGFNEVGTIYQEVGVALGMNERQLLWQVKVPLALPYLLNGIKLA 159

Query: 514 CG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                 +A++ + + + G   L  TGLG Y       G     +L ++ M  F L +
Sbjct: 160 LIEIIASATLATYIGAGGLGTLIFTGLGLYDMADVIIGGASVAMLSLITMVGFDLLI 216


>gi|158315679|ref|YP_001508187.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
 gi|158111084|gb|ABW13281.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EAN1pec]
          Length = 300

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 70/193 (36%), Gaps = 13/193 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + IA+ I I   I +     I +   P+A LL   P     PL+   + Y       
Sbjct: 109 LTGLAIAAGIGILSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFWLGYGF----W 164

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +++ +  + + ++ N + G  +      ++ +   +  WR    + LP   P    G 
Sbjct: 165 SRTVVCVVISMFPMITNTLFGIQSVDAGHHDLFTLRRVGRWRRLLRLELPSALPAIFVGL 224

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + G A   +IV +            G+GA I   T   S   +   +++   F L + 
Sbjct: 225 RISAGLAVIGAIVGDFF----FRRGDVGIGALIDNYTRDLSSGPLFAAIIVSALFGLVV- 279

Query: 571 RFLWHPLYLYGTR 583
              W  L+    R
Sbjct: 280 --FW--LFGLAAR 288



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 80/257 (31%), Gaps = 16/257 (6%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGII--NILLHGIQETTVPRD--IVDIVPITLDVHSLP 62
           L    +R   P      A + +   +    L    +    P    + +          + 
Sbjct: 39  LAARATRTALPPFAVFAAVIGIWYAVTYWFLAPRRRFLLPPPHEVVSEGFLDGRTADEIL 98

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                T    L+ + I+     + A L +++R +     P   ++Q+IPIL  +     +
Sbjct: 99  TALGGTAKVALTGLAIAAGIGILSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFW 158

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +         +         ++ M  +    + ++     ++    R+  W++   
Sbjct: 159 LGYGF--------WSRTVVCVVISMFPMITNTLFGIQSVDAGHHDLFTLRRVGRWRRLLR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           L +P ++P +   + +S        +  +            GIG+ I    ++     + 
Sbjct: 211 LELPSALPAIFVGLRISAGLAVIGAIVGDFF----FRRGDVGIGALIDNYTRDLSSGPLF 266

Query: 243 YAMLTMLGVIFLYDQLL 259
            A++       +   L 
Sbjct: 267 AAIIVSALFGLVVFWLF 283


>gi|322372041|ref|ZP_08046583.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320548463|gb|EFW90135.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 224

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 62/176 (35%), Gaps = 15/176 (8%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                LA +++++  V++ + ++ Q++P L  +          +   ++G        +F
Sbjct: 44  IPLGVLATRNKQVKRVVMSVGNVAQTVPTLAIIALVFPLLGLGFLPSLVG--------LF 95

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T  +  +  +    L ++       +R   ++  Q    + +P ++P +   +  S    
Sbjct: 96  TYALLPILTNTVAGLEDVDESTVAAARGMGMTENQILRKIKLPLALPVIFAGIRTS--AV 153

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                A     +G       G+G ++   I   D   +L   +    +    D L 
Sbjct: 154 LNVGTAYLAFFIGG-----GGLGVWVITGISLFDTPQLLAGAIPGALLAIGLDLLF 204



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 16/184 (8%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+G+       +   +     +    P      LV   +    L   + L         
Sbjct: 44  IPLGVLATRNKQVKRVVMSVGNVAQTVPTLAIIALVFPLLGLGFLPSLVGL----FTYAL 99

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N +AG           A    +T  +  R I LP   P    G  T+       +
Sbjct: 100 LPILTNTVAGLEDVDESTVAAARGMGMTENQILRKIKLPLALPVIFAGIRTSAVLNVGTA 159

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++     G       GLG ++         P+++ G +      + L+      L+   
Sbjct: 160 YLAFFIGGG-------GLGVWVITGISLFDTPQLLAGAIPGALLAIGLDL-----LFALI 207

Query: 582 TRCL 585
            R L
Sbjct: 208 ERRL 211


>gi|192290642|ref|YP_001991247.1| glycine/betaine ABC transporter substrate-binding protein
           [Rhodopseudomonas palustris TIE-1]
 gi|192284391|gb|ACF00772.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris TIE-1]
          Length = 515

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 21/198 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ 111
           + +LP Y        L+A+ + L+ +   A  A     L   L+    I+Q+IP      
Sbjct: 13  LANLPDYLGAHVRVSLAALALGLIVSLPLAIFARHRPVLRGTLLGFAGIVQTIPGLALLA 72

Query: 112 -----ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                +L     ++  F   +        L A+ A+    +  +  +    L  I   L 
Sbjct: 73  LFYPLLLALAALSMSAFGVSFSA---FGFLPAVLALALYSMLPVLRNTITGLDGIDPALI 129

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +    ++  Q    + +P +MP ++  +  +    W    A+    +G T      +G
Sbjct: 130 EAAEGVGMTERQVLTMVELPLAMPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LG 182

Query: 227 SYIALAIKEQDLLAILYA 244
           +YI   ++ Q+ + +L+ 
Sbjct: 183 NYIFAGLQTQNWILVLFG 200



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 20/205 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +     ++D L  +        RV +  + +  I+ +P+ I+   RP +   +  FA ++
Sbjct: 3   LFADPRWRDALANLPDYLGAHVRVSLAALALGLIVSLPLAIFARHRPVLRGTLLGFAGIV 62

Query: 426 AAFPANVFFPLVV------------SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
              P      L              +    +     L   L +   +   +L N I G  
Sbjct: 63  QTIPGLALLALFYPLLLALAALSMSAFGVSFSAFGFLPAVLALALYSMLPVLRNTITGLD 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    + LP   P  + G  TA    W     +     G   
Sbjct: 123 GIDPALIEAAEGVGMTERQVLTMVELPLAMPVIMAGIRTAA--VWVIGTATLSTPIGQTS 180

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLG 558
                LG YI    +  ++  V+ G
Sbjct: 181 -----LGNYIFAGLQTQNWILVLFG 200


>gi|92114475|ref|YP_574403.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91797565|gb|ABE59704.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score = 67.6 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 76/199 (38%), Gaps = 17/199 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTV 120
             A +       +  +++L         ++    R+   ++ +L++  +IP L  L  ++
Sbjct: 43  YLAVQHLWLTAMSGGLAILVAIPLGIWLSRPSMARVAESMMQVLNVGTTIPTLAVLALSM 102

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +             + A+F +F + +  +  + Y  L  +   L+E +    +S  Q+ 
Sbjct: 103 SFLGIG--------TVPAVFGLFVATLLPIARNTYTGLKGVDPALKEAAAGIGMSPTQRL 154

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++  +   +  +++     V  + +I  G       G+G  I   I   D + 
Sbjct: 155 LRVELPNALYVIFAGIRTALAINIGTVPLAFLIGAG-------GLGELIFTGIDLYDPVM 207

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L   +    +  + D L+
Sbjct: 208 MLSGAIPTALLAVVVDMLI 226



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             V+  V +   W     +++ F +  +  V +L    ++   +   +A ++ IP+GIW+
Sbjct: 12  LLVLVAVFLAGVWSQSSGVIDDFIF-YLPDVHYLAVQHLWLTAMSGGLAILVAIPLGIWL 70

Query: 409 GFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             RP ++   +   Q+L      P      L +S +        +     +   T   I 
Sbjct: 71  -SRPSMARVAESMMQVLNVGTTIPTLAVLALSMSFLGIG----TVPAVFGLFVATLLPIA 125

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N   G        KE A+   ++  +    + LP        G  TA         ++ 
Sbjct: 126 RNTYTGLKGVDPALKEAAAGIGMSPTQRLLRVELPNALYVIFAGIRTALAINIGTVPLAF 185

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +   G       GLG  I    +      ++ G +      + ++  +
Sbjct: 186 LIGAG-------GLGELIFTGIDLYDPVMMLSGAIPTALLAVVVDMLI 226


>gi|111226060|ref|YP_716854.1| putative ABC transporter permease [Frankia alni ACN14a]
 gi|111153592|emb|CAJ65350.1| putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 249

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 15/203 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +      L           LSA+ I L+       LA + R     +  +  I+ ++P L
Sbjct: 21  VETRSDELSAALREHVSLTLSAVAIGLVIAVPLVLLARRWRFAVAWISGLASILYTVPSL 80

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +           IG     +  +F          +   L  +P D+ + +R   
Sbjct: 81  AFFALLLPVTGLSTTTVRIGLVAYTLVILFR--------GLLAGLDAVPADVRDAARGMG 132

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               +    + +P ++P ++  + ++        V++  +V     I   G+G  I   +
Sbjct: 133 YGPLRLLVTVEIPLALPSIMAAIRVA-------TVSTIALVTVGATIGHGGLGDLIYDGL 185

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
                  +L A +  + +  + D
Sbjct: 186 TSSFKSEVLTASVLCVALAVVAD 208



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 13/181 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + I  +I +P+ +         + I   A +L   P+  FF L++           +
Sbjct: 40  LSAVAIGLVIAVPLVLLARRWRFAVAWISGLASILYTVPSLAFFALLLPVTGLSTTTVRI 99

Query: 451 WLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
            L    +      ILF  ++AG  A P D ++ A        R    + +P   P  +  
Sbjct: 100 GLVAYTLV-----ILFRGLLAGLDAVPADVRDAARGMGYGPLRLLVTVEIPLALPSIMAA 154

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A         V      G       GLG  I +        EV+   ++     +  
Sbjct: 155 IRVATVSTIALVTVGATIGHG-------GLGDLIYDGLTSSFKSEVLTASVLCVALAVVA 207

Query: 570 N 570
           +
Sbjct: 208 D 208


>gi|254486302|ref|ZP_05099507.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043171|gb|EEB83809.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 279

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 84/268 (31%), Gaps = 12/268 (4%)

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
           W  F+  +  +         +          L +       L   W  VV G+ I     
Sbjct: 3   WLIFAIAAWALGWWVNV--RLARGRAGRLRSLAAPMVFGVTLIAVWEGVVRGLEISPVLL 60

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPF 421
                +       +  +      T+ +  +   ++       + + I   P +   + P 
Sbjct: 61  PTPTAIAARFAASLDVLWVDFVQTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPV 120

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              +AA P     P++V    +   +    + +++ F     +L N + G  A     ++
Sbjct: 121 GNFVAALPVIGMAPILVMWFGFDWQSKAAVVVVMVFF----PMLVNTVQGLQATEAMQRD 176

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +  ++  + W     + LP   P+   G       A   +IV+E            G+G 
Sbjct: 177 LMRTYAASYWATLFKLRLPAAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVKGMGF 231

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            I+ S  + +   V   +++      A 
Sbjct: 232 RISTSVGQLALDLVWAEIVVAAIAGSAF 259



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 92/256 (35%), Gaps = 16/256 (6%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           + L       +     P +F +    +  G++  L         P  I      +LDV  
Sbjct: 19  VRLARGRAGRLRSLAAPMVFGVTLIAVWEGVVRGLEISPVLLPTPTAIAARFAASLDV-- 76

Query: 61  LPQYASRTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           L     +T L+  LS  V+     F+ A    +   L   L+P+ + + ++P++G     
Sbjct: 77  LWVDFVQTVLKGALSGYVLGCGAAFLIAVAIDRFPFLQRGLLPVGNFVAALPVIGMAPIL 136

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V++F   +  K     +   F         M  +  Q L        ++ R++  S W  
Sbjct: 137 VMWFGFDWQSKAAVVVVMVFF--------PMLVNTVQGLQATEAMQRDLMRTYAASYWAT 188

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + L +P +MP +   + +  +      + +E         P+ G+G  I+ ++ +  L 
Sbjct: 189 LFKLRLPAAMPFVFNGLKIGTTLALIGAIVAEFFGS-----PVKGMGFRISTSVGQLALD 243

Query: 240 AILYAMLTMLGVIFLY 255
            +   ++        +
Sbjct: 244 LVWAEIVVAAIAGSAF 259


>gi|49078122|gb|AAT49753.1| PA3890 [synthetic construct]
          Length = 221

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ D   V  L    +  V+V + +A ++ +P+G+ +     ++  +Q  A ++   P+
Sbjct: 7   LSHLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              F L++   S +        ++  +   +   IL N     +      +E      +T
Sbjct: 67  IALFGLLMPVYSVFGQGLGPLPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+  R + +P   P  + G  TA         ++ V   G       GLG  I  S  +
Sbjct: 127 FWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSISQ 179

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            + P +V+G +++    +  +  L
Sbjct: 180 SNMPMLVVGAVLVSLLAIVADLLL 203



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +  L +L A+ +++L       L  +   L   L     +M +IP + 
Sbjct: 9   HLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +  +     G      L AI A+F   +  +  + Y +L  +   + E  +   +
Sbjct: 69  LFGLLMPVYSVFGQGLGP---LPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G  I  +I 
Sbjct: 126 TFWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
           + ++  ++   + +  +  + D LL
Sbjct: 179 QSNMPMLVVGAVLVSLLAIVADLLL 203


>gi|308186154|ref|YP_003930285.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308056664|gb|ADO08836.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 391

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 81/213 (38%), Gaps = 16/213 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            SR    +   ++ +L+          +       +  +L ++Q++P +      +    
Sbjct: 184 LSRHLTLLAGTVLPALMIALPLGVTLFRRPGWQGSVFGVLSVIQTVPSVALFGLLIAPLA 243

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       A+          A+ A+    +  +  S+   L  +P ++ E +R   +S 
Sbjct: 244 GLAQHFPWLADWGISGIGMAPALIALVLYALLPLVRSVVVGLQQVPHEVRESARGTGMSS 303

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+F  + VP ++P  +  + + +       V + +I  G       G G+ I   +   
Sbjct: 304 WQQFIAVDVPLALPVWLAGLRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSS 356

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            L  +L  ++ ++ +  + D  LFR +I    +
Sbjct: 357 ALDLVLLGVIPVIALAVVID-ALFRLLISLLER 388



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 79/210 (37%), Gaps = 20/210 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A +I +P+G+ +  RP     +     ++   P+   F L+++ ++    
Sbjct: 188 LTLLAGTVLPALMIALPLGVTLFRRPGWQGSVFGVLSVIQTVPSVALFGLLIAPLAGLAQ 247

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +                  + ++      ++ +V+ G    P++ +E A    ++ W+ +
Sbjct: 248 HFPWLADWGISGIGMAPALIALVLYALLPLVRSVVVGLQQVPHEVRESARGTGMSSWQQF 307

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P ++ G           ++V+ +   G       G GA I +     +   
Sbjct: 308 IAVDVPLALPVWLAGLRVVVVQTLGMAVVAALIGAG-------GFGAIIFQGLLSSALDL 360

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           V+LGV+ +    + ++      L     R 
Sbjct: 361 VLLGVIPVIALAVVIDALF-RLLISLLERK 389


>gi|255263334|ref|ZP_05342676.1| ABC transporter, permease protein [Thalassiobium sp. R2A62]
 gi|255105669|gb|EET48343.1| ABC transporter, permease protein [Thalassiobium sp. R2A62]
          Length = 306

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 65/159 (40%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   ++  +I + + I + I I +   +   + P+A +    P     P++
Sbjct: 100 SLVYHGWVTLEPTLLGFVIGTALGIMLAIGIVYSRVMDRSVMPWAIVSQTIPILALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +    +      S++  + + + ++  ++ G  +      ++  +++ +G++    +
Sbjct: 160 IVVLGSMGIQGLFPKSIIAAYLSFFPVVVGMVKGLRSPSAMQLDLMRTYNASGYQVLMGL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            LP   PY           +   +IV+E+ +        
Sbjct: 220 RLPASTPYLFASLKIGIAASIIGTIVAELPTGAKAGFGA 258



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 11/234 (4%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L    +         +        SL  +   T    L   VI      + A     SR 
Sbjct: 76  LPSPHQVAGELYATTVEKKITSKRSLVYHGWVTLEPTLLGFVIGTALGIMLAIGIVYSRV 135

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +   ++P   + Q+IPIL      +V   ++    +    + A +  F    + +   M 
Sbjct: 136 MDRSVMPWAIVSQTIPILALAPMIIVVLGSMGIQGLFPKSIIAAYLSF----FPVVVGMV 191

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L +      ++ R++  SG+Q    L +P S P L  ++ + ++      + +E+   
Sbjct: 192 KGLRSPSAMQLDLMRTYNASGYQVLMGLRLPASTPYLFASLKIGIAASIIGTIVAELPTG 251

Query: 216 GDTVIPLPGI-----GSYIALAIKEQDLLAILYAMLTMLGVI--FLYDQLLFRP 262
                    +     G  +               ++ ++ +I   L  Q+  +P
Sbjct: 252 AKAGFGARMLVGDQYGQPLVSWAALFAAAITAACLVGVVALIERVLLRQMGMKP 305


>gi|21283004|ref|NP_646092.1| hypothetical protein MW1275 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486229|ref|YP_043450.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|297207959|ref|ZP_06924390.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300912043|ref|ZP_07129486.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21204443|dbj|BAB95140.1| MW1275 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244672|emb|CAG43104.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887202|gb|EFH26104.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300886289|gb|EFK81491.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 305

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGILGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGILGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|126727942|ref|ZP_01743767.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126702773|gb|EBA01881.1| glycine betaine/proline ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 737

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 135/436 (30%), Gaps = 58/436 (13%)

Query: 10  FISRRIFP--NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
              +R +P       ++   V GII   L G +       +     I   +    + A  
Sbjct: 90  LFGKRRWPHMGPIPWMSIAAVAGIIGYYLGGWRLAA----LGAGTFIWTAMIGQWKIAME 145

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++ A  ++ +   +    A KSR +   L PIL                  F    
Sbjct: 146 TMSVLIVAAPVAFIIGLLLGIWAWKSRTVEAALQPIL----------VYPSNNSVFHLPS 195

Query: 128 PGKVIGAELAAIFAIFTSQVWNMT--FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             + +    +        ++ + T        L  +  ++ E  +    S WQ   Y+ +
Sbjct: 196 ARRDLFQSWSYCRRCCNYRLCHSTDDLMTTLGLKKVSHEVVEAGKMSGCSSWQMLRYVYI 255

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +   ++  +          ++    +VV    I +PG+G+ +   +    L   +   
Sbjct: 256 PSARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSMEIG 308

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV-----LYLFRKTNFLRFIGY 300
           +T++ +  + D+L        +  +  ++        SW      L +         I  
Sbjct: 309 ITIVLLAVMLDRL--------TKAWVAKQPEHFEKGTSWFLRHKYLVMSVAAFVFFIIVA 360

Query: 301 SSWNFFSPLSNNVKK-------------------LCRTLGVIRFHFPENFLQLCSNQRVS 341
             W+F S +                         L      +R       L    N  +S
Sbjct: 361 QFWDFASEVGRKQHYSQGKALDGFVKNTLLQDPTLKFITTGLRVFMNNYVLIPFRNFLLS 420

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             +  F   VV         +   + +  F++  +        IT++ VV    +A++I 
Sbjct: 421 IPMPAFIAFVVALSWYMAGRKQALFALAFFSWVALSGWWDRSIITIYYVVSSTAVAALIA 480

Query: 402 IPVGIWIGFRPHISSK 417
           IP+ +W G  P     
Sbjct: 481 IPLAVW-GASPPAQRI 495



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 15/156 (9%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           D  Q+ P   +L   ++ F            +A +FAI    +  +     + L N+P +
Sbjct: 583 DSAQTFPSFVYLLPAIMLFSI--------TPIAVLFAIMIFAMVPLLRYTIEGLRNVPAE 634

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + E +     +  QK W +  P ++P +      ++   +F  + +  I   D       
Sbjct: 635 MTESADMSGATRMQKLWTVQFPLALPTMAVGFNQALMFAFFMTMIAAYIGTVD------- 687

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +G  +   +   DL         +  +   +D ++ 
Sbjct: 688 LGQELQRTLAGTDLGKNFVLGFNVAFMALTFDMVIL 723



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 24/246 (9%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +   +      + I     + G  +G  W+        F +  ++    +   TM  ++V
Sbjct: 94  RRWPHMGPIPWMSIAAVAGIIGYYLG-GWRLAALGAGTFIWTAMIGQWKIAMETMSVLIV 152

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
              +A II + +GIW      + + +QP             +P   S         +L+ 
Sbjct: 153 AAPVAFIIGLLLGIWAWKSRTVEAALQPIL----------VYPSNNSVFHLPSARRDLFQ 202

Query: 453 SLLMIFGTQWYIL------FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           S         Y L           G     ++  E       + W+  RY+ +P      
Sbjct: 203 SWSYCRRCCNYRLCHSTDDLMTTLGLKKVSHEVVEAGKMSGCSSWQMLRYVYIPSARTEI 262

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G            +++             GLGA +            +   + +    
Sbjct: 263 LVGVNQVIMLCLAMVVLTAFIGM-------PGLGAKLLAMMGSFKLGRSMEIGITIVLLA 315

Query: 567 LALNRF 572
           + L+R 
Sbjct: 316 VMLDRL 321



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 68/222 (30%), Gaps = 10/222 (4%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           + ++  +       G        +F +  +   +  ++ + +   +   A  I    + Y
Sbjct: 473 TAVAALIAIPLAVWGASPPAQRIDFSKGINGDVIIGLISLIFRRSIIAFASFIVAGILRY 532

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++          V  +G   +   ++  I   +IW  +G  +         +   A    
Sbjct: 533 MLWKLGVFGDEEV-SMGIYRLVYWIIFAISFYLIWRFMGQMM-----RDVFLLLAADSAQ 586

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            FP+ V+    +   S       + +   ++      +L   I G    P +  E A   
Sbjct: 587 TFPSFVYLLPAIMLFSITP----IAVLFAIMIFAMVPLLRYTIEGLRNVPAEMTESADMS 642

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             T  +    +  P   P    G   A   A+  ++++    
Sbjct: 643 GATRMQKLWTVQFPLALPTMAVGFNQALMFAFFMTMIAAYIG 684


>gi|332671077|ref|YP_004454085.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
 gi|332340115|gb|AEE46698.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas fimi ATCC 484]
          Length = 291

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 77/190 (40%), Gaps = 9/190 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++V     +++        P ++       +   +       + +R+LS  V+  +   V
Sbjct: 45  LVVWQAAALVVGQRLLLPAPAEVGARFGELVVEPAFWATVGHSLVRVLSGFVLGTVAGTV 104

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A  AA+   +  ++ P++  +++ P++ F+   +++         + +   A+      
Sbjct: 105 LAVTAARWSVVRALVTPLVGAVRAAPVVSFIILVLIW---------VDSGRLAVVVSALM 155

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  ++ + +      + EV+  FRL  W++   + VP  +P       + +   W 
Sbjct: 156 VLPVVFAAVLEGIGRRDVAMLEVALVFRLPVWRRVRAIDVPAVLPFFAAACQVGIGLAWK 215

Query: 206 FVVASEMIVV 215
             +A+E+I +
Sbjct: 216 SGIAAEVIGL 225



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 11/261 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
           + + R     R       +++     V     + W      V   +   +   +   F  
Sbjct: 14  RGVRRVRQWARGRRGSAVVRVVRPVLVLAFWLVVWQAAALVVGQRLLLPAPAEVGARFGE 73

Query: 374 QDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             V    W     ++ RV+   ++ ++    + +       + + + P    + A P   
Sbjct: 74  LVVEPAFWATVGHSLVRVLSGFVLGTVAGTVLAVTAARWSVVRALVTPLVGAVRAAPVVS 133

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           F  LV+  V    L   + +S LM+    +     V+ G         EVA  F +  WR
Sbjct: 134 FIILVLIWVDSGRL--AVVVSALMVLPVVFA---AVLEGIGRRDVAMLEVALVFRLPVWR 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R I +P + P++        G AW + I +EV       L    +G  + ++      
Sbjct: 189 RVRAIDVPAVLPFFAAACQVGIGLAWKSGIAAEVIG-----LPAGSVGERLYDAKLLLET 243

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            +V +   ++    LA  R L
Sbjct: 244 ADVFVWTGVVVALSLAAERGL 264


>gi|150376774|ref|YP_001313370.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031321|gb|ABR63437.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 246

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 17/221 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
               E  +   + +  P   +  SL          +  A   + +     A +  +    
Sbjct: 24  PAWFEAMLTPLVQENAPAIYNQGSLFWLTVLHLRTVFIATFAATVVAVSLAIIVTRKAGA 83

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +   +++I Q+ P +  L   V  +           E   + A+F   +  +  + 
Sbjct: 84  EFLPLSRSLVNIGQTFPPVAVLALAVPIYG--------FGEKPTLIALFLYGLLPIFENA 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +P  + E +R   ++G Q+   + +P ++P ++  + +S       VV S    
Sbjct: 136 LTGLTTLPPTVVEAARGAGMTGSQRLIRIELPLALPVILTGVRLS-------VVISLATA 188

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              + +    +G  I   ++  +L  +L   L +  +  L 
Sbjct: 189 TIGSTVAAKTLGEVIIAGLQSNNLAFVLQGGLIVAALAVLI 229



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 17/197 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF----AQLLAAFPANV 432
             + WL  + +  V +    A+++ + + I +       ++  P       +   FP   
Sbjct: 46  GSLFWLTVLHLRTVFIATFAATVVAVSLAIIV--TRKAGAEFLPLSRSLVNIGQTFPPVA 103

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L V    +      + L L  +      I  N + G +  P    E A    +TG +
Sbjct: 104 VLALAVPIYGFGEKPTLIALFLYGLL----PIFENALTGLTTLPPTVVEAARGAGMTGSQ 159

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I LP   P  +TG   +        ++S   +     +    LG  I    +  + 
Sbjct: 160 RLIRIELPLALPVILTGVRLS-------VVISLATATIGSTVAAKTLGEVIIAGLQSNNL 212

Query: 553 PEVVLGVLIMCCFVLAL 569
             V+ G LI+    + +
Sbjct: 213 AFVLQGGLIVAALAVLI 229


>gi|288962224|ref|YP_003452519.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
 gi|288914490|dbj|BAI75975.1| sulfonate/nitrate/taurine transport system permease protein
           [Azospirillum sp. B510]
          Length = 371

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 9/183 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+   ++       V I     P ++  + P   L +A P     P++V    +   
Sbjct: 177 LVSVLRGYLMGCGAGFLVAILADRLPFLARGLLPLGNLASAVPVVGIAPIMVMWFGFDWQ 236

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +     + +++  T + +L N +AG  +      ++  S+    WR    + LP   P+ 
Sbjct: 237 SK----AAVIVVMTFFPMLINSLAGLQSAERIQLDLMRSYAAGHWRTLAMLRLPCALPFL 292

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G       A   +IV+E            G+G  I+    + +   V   + +     
Sbjct: 293 FNGLKINSTLALIGAIVAEFFG-----TPVVGMGFRISTQVARMNLDVVWATIAVAALTG 347

Query: 567 LAL 569
             L
Sbjct: 348 SLL 350



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 95/260 (36%), Gaps = 21/260 (8%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL-RMLSA 75
           P +F L   +L   +             P  ++       +   L     +T L  +L  
Sbjct: 126 PALFGLALVLLWEILTRGFQVPSILLPPPSAVLTAFAA--NAADLWDDFRQTVLVSVLRG 183

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            ++     F+ A LA +   L   L+P+ ++  ++P++G     V++F   +  K     
Sbjct: 184 YLMGCGAGFLVAILADRLPFLARGLLPLGNLASAVPVVGIAPIMVMWFGFDWQSKAA--- 240

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
                 I     + M  +    L +  R   ++ RS+    W+    L +P ++P L   
Sbjct: 241 -----VIVVMTFFPMLINSLAGLQSAERIQLDLMRSYAAGHWRTLAMLRLPCALPFLFNG 295

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++ +      + +E         P+ G+G  I+  +   +L  +++A + +  +    
Sbjct: 296 LKINSTLALIGAIVAEFFGT-----PVVGMGFRISTQVARMNLD-VVWATIAVAALTGSL 349

Query: 256 DQ----LLFRPMIVWSNKFR 271
                 L  R +  W   FR
Sbjct: 350 LYGALALAERHVTAWHPSFR 369


>gi|229056482|ref|ZP_04195893.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH603]
 gi|228720856|gb|EEL72408.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH603]
          Length = 296

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSLGAVVISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 IIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TYGAVIFIVGSTLVSLGAVVISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    II+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRIIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|261340561|ref|ZP_05968419.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317658|gb|EFC56596.1| glycine betaine/L-proline ABC transporter, permease/glycine
           betaine/L-proline-binding protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 242

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 70/199 (35%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      ++ + V++++          +   +    ++  I  I Q+ P +  L   V  
Sbjct: 47  ALAHAWLVILSSVVAIVIGVGAGIAVTRPSGKEFRPLVETIAAIGQTFPPVAVLAIAVPV 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       ++ AI A+    V  +       + ++P  +  V+    +S WQ+   
Sbjct: 107 MG--------FGQVPAIVALILYGVLPILQGTLAGIASVPGSVLSVAEGMGMSAWQRLGK 158

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P +V  + MS+         +  +           +G+ I + +   +   I+
Sbjct: 159 VELPLAAPVIVAGIRMSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYII 211

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 212 QGALLVALAAIVVDRLFER 230



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 83/247 (33%), Gaps = 14/247 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   +  ++  +       S  +             I L     + V++  ++A +I +
Sbjct: 7   WLVGLFLVLLWAMPYSAGLFSTLFPGLPRPVYQQESFINLALAHAWLVILSSVVAIVIGV 66

Query: 403 PVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             GI +           ++  A +   FP      + V  + +  +   + L L  +   
Sbjct: 67  GAGIAVTRPSGKEFRPLVETIAAIGQTFPPVAVLAIAVPVMGFGQVPAIVALILYGVL-- 124

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   +AG ++ P     VA    ++ W+    + LP   P  V G   +       
Sbjct: 125 --PILQGTLAGIASVPGSVLSVAEGMGMSAWQRLGKVELPLAAPVIVAGIRMSVIINIGT 182

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
           + ++         +    LG  I       +   ++ G L++    + ++R     L +Y
Sbjct: 183 ATIA-------STVGANTLGTPIIIGLSGFNTAYIIQGALLVALAAIVVDRLF-ERLAVY 234

Query: 581 GTRCLRL 587
            +R  R+
Sbjct: 235 LSRHRRV 241


>gi|291436535|ref|ZP_06575925.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339430|gb|EFE66386.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672]
          Length = 221

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           I +PVG+  G      + +   A    A P+     L V  + +  L   + L +L    
Sbjct: 44  IGLPVGLVTGHTGRGGNALAFVANAARALPSFGLLVLAVLLIGFGLLPVMIPLVVL---- 99

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL        +      + A    +   R    + LP   P  ++G  +A     +
Sbjct: 100 AVPPILVTTYEAVRSVDPSPVDAARGMGMRESRILLRVELPVALPLILSGLRSAAIQIVS 159

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
            + ++   S G       GLG YI +   +  + +VV G  ++    L      W
Sbjct: 160 TATIAAYVSLG-------GLGRYIVDGLYQRDYEKVVGGATLVAVLALLTLAVFW 207



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 65/183 (35%), Gaps = 15/183 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +PQ         L A+ ++         +   + R G  L  + +  +++P  G L   
Sbjct: 22  GIPQRLLEHVRYTLLALALATAIGLPVGLVTGHTGRGGNALAFVANAARALPSFGLLVLA 81

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+              L  +  +    V  +  + Y+++ ++     + +R   +   + 
Sbjct: 82  VLLIGFGL--------LPVMIPLVVLAVPPILVTTYEAVRSVDPSPVDAARGMGMRESRI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P ++  +  +          +  + +G       G+G YI   + ++D  
Sbjct: 134 LLRVELPVALPLILSGLRSAAIQIVSTATIAAYVSLG-------GLGRYIVDGLYQRDYE 186

Query: 240 AIL 242
            ++
Sbjct: 187 KVV 189


>gi|239942217|ref|ZP_04694154.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239988683|ref|ZP_04709347.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291445671|ref|ZP_06585061.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291348618|gb|EFE75522.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 245

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     + +++I L   F  A LA +  R    ++ +  ++ ++P L   + 
Sbjct: 23  QELADATVQHIGITVVSVLIGLAVAFPLALLARRGPRFAGPVLGLTTVLYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +PR+  + +R       +
Sbjct: 83  LLPLFGL--------SAALVVTGLVLYSLTILVRNILAGLAAVPREARDAARGMGYGPAR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +    +++   G+G+ I  A+     
Sbjct: 135 LLWEVELPLALPAVMAGLRIA-------TVSTVALTTVGSLVGKGGLGNLIEDALPSFFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AQVLAASV 195



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 11/171 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I   +  P+ +     P  +  +     +L   P+   F L++            
Sbjct: 37  VVSVLIGLAVAFPLALLARRGPRFAGPVLGLTTVLYTVPSLAMFSLLLPLFGLSAALVVT 96

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      ++ N++AG +A P + ++ A        R    + LP   P  + G 
Sbjct: 97  GLVLYSLTI----LVRNILAGLAAVPREARDAARGMGYGPARLLWEVELPLALPAVMAGL 152

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             A       ++ +   +     +   GLG  I ++       +V+   ++
Sbjct: 153 RIA-------TVSTVALTTVGSLVGKGGLGNLIEDALPSFFKAQVLAASVL 196


>gi|42525729|ref|NP_970827.1| ABC transporter permease [Treponema denticola ATCC 35405]
 gi|41815740|gb|AAS10708.1| ABC transporter, permease protein, cysTW family [Treponema
           denticola ATCC 35405]
          Length = 243

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 93/241 (38%), Gaps = 18/241 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ---YASRTTLRMLS 74
           N F +      + +  I   G++   +   I +I+     +   P+   +   T +R+  
Sbjct: 9   NKFKIGGAFFCLILWEIFAQGLKAPLIIPPIKEILSALFVIIKTPETYVFILSTLIRIFI 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + I     F+    +  ++ +   L    +I++S P +  L   +++F          +
Sbjct: 69  TLAIDSFIAFLLGIASGLNKNVEDFLSAPENILKSSPTISVLLLALIWF---------KS 119

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +  IF      +  +  ++   + NI + L E+S  F +   ++   L +P   P L  
Sbjct: 120 NMTPIFVTSLIVLPLLYRNIVDGVKNIDKGLIEMSYDFNVPFGKRLKSLYLPCIRPFLKN 179

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIF 253
             ++S       V+ +E++       P  GIGS    A  + +  +I  +  + +L   F
Sbjct: 180 GYILSTGFAVKVVIMAEVLS-----QPKYGIGSAFQTAKIQIETASIFAWTGIAVLLAAF 234

Query: 254 L 254
           L
Sbjct: 235 L 235



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T+ R+ + + I S I   +GI  G   ++   +     +L + P      L +     
Sbjct: 60  LSTLIRIFITLAIDSFIAFLLGIASGLNKNVEDFLSAPENILKSSPTISVLLLALIWF-- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N+    +        +  N++ G         E++  F++   +  + + LP I 
Sbjct: 118 ---KSNMTPIFVTSLIVLPLLYRNIVDGVKNIDKGLIEMSYDFNVPFGKRLKSLYLPCIR 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+   G I + G A    I++EV S         G+G+    +  +     +     I  
Sbjct: 175 PFLKNGYILSTGFAVKVVIMAEVLSQPKY-----GIGSAFQTAKIQIETASIFAWTGIAV 229

Query: 564 CFVLAL 569
                L
Sbjct: 230 LLAAFL 235


>gi|312870585|ref|ZP_07730700.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311093900|gb|EFQ52229.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 216

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +     QY  +     L  + IS++       L ++ + +    V    +++ IP L  L
Sbjct: 12  NSGQYWQYVGQHLFLTLVTLAISMVIALPLGYLGSRLKPVASFCVAFAQVLRIIPSLALL 71

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +               + A+ A+    +  +  +       +    +EV  +  ++ 
Sbjct: 72  FLLIPVIGTGM--------VPALIALVVLALPPLLINTILGFNEVSPLYKEVGTALGMTS 123

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +   
Sbjct: 124 RQLRRQIEIPLALPYVLNGIKLAI----VEIIASATLA---TYIGAGGLGTLIFTGLGLY 176

Query: 237 DLLAILYAMLTMLGV 251
           D+  I+   +++  +
Sbjct: 177 DMTYIVIGAVSVAAL 191



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 5/184 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  +V + I+ +I +P+G        ++S    FAQ+L   P+     L++  +    +
Sbjct: 24  LFLTLVTLAISMVIALPLGYLGSRLKPVASFCVAFAQVLRIIPSLALLFLLIPVIGTGMV 83

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +L +         N I G +     +KEV ++  +T  +  R I +P   PY 
Sbjct: 84  PALIALVVLALPPLL----INTILGFNEVSPLYKEVGTALGMTSRQLRRQIEIPLALPYV 139

Query: 507 VTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + G   A      +A++ + + + G   L  TGLG Y       G+     L +  M  F
Sbjct: 140 LNGIKLAIVEIIASATLATYIGAGGLGTLIFTGLGLYDMTYIVIGAVSVAALSLGAMLGF 199

Query: 566 VLAL 569
              +
Sbjct: 200 DFLI 203


>gi|213583938|ref|ZP_03365764.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 210

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 2   LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 61

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 62  GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +   +   
Sbjct: 122 GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSS 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  +L  ++ ++ +  + D L 
Sbjct: 175 AIDLVLLGVIPVIALAVVIDALF 197



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++    
Sbjct: 6   LMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVK 65

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+AG +  P D  E A +  ++  + +
Sbjct: 66  QFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRF 125

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++ LP   P ++             ++ + +   G       G GA + +     +   
Sbjct: 126 RHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDL 178

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 179 VLLGVIPVIALAVVIDALF 197


>gi|227548200|ref|ZP_03978249.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079761|gb|EEI17724.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 215

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 7/207 (3%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           + Y+V    +             +    + + +A ++  PVGI IG     ++ +   A 
Sbjct: 1   MNYLVTRENWGGDTGFAVRLLEHVGYSALAVFLALLVAAPVGIAIGHSRRGANTVLSIAG 60

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L A PA      +   +      P +  +++++      +L   +AG  +        A
Sbjct: 61  ALRALPALGLLTWLAISLPRGATLPLIPATIVLVVLAIAPLLAGFVAGFDSVSRQVVHSA 120

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   +  +    + LP   P  + G  +        + V      G       GLG Y+
Sbjct: 121 RAAGYSEAQILTRVELPLAAPVIIGGLRSCVVQVIATATVVSFIGLG-------GLGRYL 173

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
            +      +P +V G L++    L  +
Sbjct: 174 IDGLAVQDYPRMVAGALLVTALALVTD 200



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ ++LL           SRR    ++ I   ++++P LG L     +     P     
Sbjct: 29  LAVFLALLVAAPVGIAIGHSRRGANTVLSIAGALRALPALGLL----TWLAISLPRGATL 84

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + A   +    +  +         ++ R +   +R+   S  Q    + +P + P ++
Sbjct: 85  PLIPATIVLVVLAIAPLLAGFVAGFDSVSRQVVHSARAAGYSEAQILTRVELPLAAPVII 144

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +          VV         + I L G+G Y+   +  QD   ++   L +  +  
Sbjct: 145 GGLR-------SCVVQVIATATVVSFIGLGGLGRYLIDGLAVQDYPRMVAGALLVTALAL 197

Query: 254 LYD 256
           + D
Sbjct: 198 VTD 200


>gi|182437892|ref|YP_001825611.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326778528|ref|ZP_08237793.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178466408|dbj|BAG20928.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326658861|gb|EGE43707.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 224

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 9/202 (4%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G+   +  ++     +             ++   V + +A  I +P+ +++G      +
Sbjct: 1   MGVIGDAWTWLTTGANWSGDGGAAHRLGEHLYVSGVALAVACAIALPLALYLGHVGRGGA 60

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                + +  A P      L +  ++    +      + ++      +L N   G     
Sbjct: 61  LAVNISNVGRAVPVFAV--LALFMLTPLRNSGYWPTIIALVLFAVPPLLTNAYVGMREVD 118

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A    ++G + +  + LP  +P  +TG  +A       + ++ +   G      
Sbjct: 119 RAVVEAARGMGMSGGQLFVRVELPLAYPMIMTGLRSAAVQVVATASIAAMVGLG------ 172

Query: 537 TGLGAYIAESTEKGSFPEVVLG 558
            GLG  I          +V  G
Sbjct: 173 -GLGRIITAGFNTYDTAQVFAG 193



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ ++       A       R G + V I ++ +++P+       V+    L P +  G
Sbjct: 36  VALAVACAIALPLALYLGHVGRGGALAVNISNVGRAVPVFA-----VLALFMLTPLRNSG 90

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I A+    V  +  + Y  +  + R + E +R   +SG Q F  + +P + P ++
Sbjct: 91  -YWPTIIALVLFAVPPLLTNAYVGMREVDRAVVEAARGMGMSGGQLFVRVELPLAYPMIM 149

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
             +          VVA+  I     ++ L G+G  I       D   +   
Sbjct: 150 TGLR----SAAVQVVATASIAA---MVGLGGLGRIITAGFNTYDTAQVFAG 193


>gi|257869064|ref|ZP_05648717.1| phosphate ABC transporter [Enterococcus gallinarum EG2]
 gi|257803228|gb|EEV32050.1| phosphate ABC transporter [Enterococcus gallinarum EG2]
          Length = 306

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +       +S +    +A  AA        R    +L P+++++  IP + +   
Sbjct: 82  ALPMIVGSFVVTFLSAIIATPFAIGAAVFMVEVSPRNGEKILQPVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V    +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 142 GLSVIVPAVRSVFGGTGFGI-LAGTFVLFIMILPTVTTMTVDALRAVPRHYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 201 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 63/173 (36%), Gaps = 9/173 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPAN 431
           Q ++  + +   +     +  IIA+   I   +++      +    +QP  +LL   P+ 
Sbjct: 77  QPLVGALPMIVGSFVVTFLSAIIATPFAIGAAVFMVEVSPRNGEKILQPVIELLVGIPSV 136

Query: 432 VFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVAS 484
           V+  + +S +       +      +     ++F      +    +    A P  ++E + 
Sbjct: 137 VYGFIGLSVIVPAVRSVFGGTGFGILAGTFVLFIMILPTVTTMTVDALRAVPRHYREASL 196

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +   T W+    ++L    P  +T  +     A+  ++  ++       + ++
Sbjct: 197 ALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAALMPSS 249


>gi|298294081|ref|YP_003696020.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296930592|gb|ADH91401.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 284

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 14/218 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I   +       SL + +  T L  L    +  +   +       SR +  V+ P 
Sbjct: 69  SPSAIAGFLMTMAADGSLWRDSYVTGLETLLGFAVGNVIGTLIGLSLWYSRFVSRVIEPF 128

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +  + SIPI+      +++F      K+  + L+ +     +         Y+    +  
Sbjct: 129 VIALGSIPIIALAPIIIIWFGTGLMSKIAMSTLSVVIVALVTS--------YKGAVGVDE 180

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D   + R+   S +Q F  L VP S+  +   + +++       +  E +   +      
Sbjct: 181 DQINLMRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSE------ 234

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G+G  I  A     +  +  A++  + +  +   L+ +
Sbjct: 235 GLGHAIFKAGSLYIIPKVFAALVATIALALILTFLVGK 272



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 19/216 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            T      +     +T    ++   + ++I   +G+ + +   +S  I+PF   L + P 
Sbjct: 78  MTMAADGSLWRDSYVTGLETLLGFAVGNVIGTLIGLSLWYSRFVSRVIEPFVIALGSIPI 137

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P+++       ++     +L ++       L     GA     D   +  +   + 
Sbjct: 138 IALAPIIIIWFGTGLMSKIAMSTLSVVIVA----LVTSYKGAVGVDEDQINLMRTLGASK 193

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           ++ +R +++P        G     G A   +IV E  S       + GLG  I ++    
Sbjct: 194 FQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMS------SSEGLGHAIFKAGSLY 247

Query: 551 SFPEVVLGVLIMCCFVLALNRFL---------WHPL 577
             P+V   ++      L L   +         W  L
Sbjct: 248 IIPKVFAALVATIALALILTFLVGKVEKLLMPWRRL 283


>gi|195978039|ref|YP_002123283.1| phosphate transport system permease protein PstC [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|225870417|ref|YP_002746364.1| phosphate ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|195974744|gb|ACG62270.1| phosphate transport system permease protein PstC [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|225699821|emb|CAW93655.1| putative phosphate ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 311

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A           ++S L    +A  AA        +    +L P ++++  IP + +   
Sbjct: 84  ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +  +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    V+P 
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPA 250



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  ++A+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVVVPFIRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       +  +
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPAS 251


>gi|187932639|ref|YP_001885396.1| phosphate ABC transporter permease PstC [Clostridium botulinum B
           str. Eklund 17B]
 gi|187720792|gb|ACD22013.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum B str. Eklund 17B]
          Length = 296

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 15/213 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATL--AAKSRRLGMVLVPILDIMQSIPIL--GFLTFT 119
           +   +T   + A+++S       A       S+    V+ P L+I+  IP +  G++  +
Sbjct: 76  FILGSTCVSIGAVILSAPIAVALAIFTNIISSKFGNKVIKPSLEILVGIPSVVYGWVGIS 135

Query: 120 VVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           V+  F+    G +  + L+ I  +    +  +      ++ NIP D  E S     + WQ
Sbjct: 136 VLVPFIKNNVGGMGFSLLSGILVLSLMILPTIATLAIDAIKNIPNDHIEASYGLGATRWQ 195

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY---------- 228
               + VP +  G++  +++ ++  +   +A +M++     +P   + S           
Sbjct: 196 TISKVIVPGAKTGILTGVVLGIARAFGEALAVQMVIGNTVKLPEGLLSSMSTLTSIITMD 255

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +A  +        L+ +  +L VI     ++ R
Sbjct: 256 MANTVGGTPWNDALWTLALILLVISFIFIVIVR 288



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 69/178 (38%), Gaps = 9/178 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +  ++  + +++   C+++  V++   IA  + I   I        +  I+P  ++L   
Sbjct: 67  DQPSFGALAFILGSTCVSIGAVILSAPIAVALAIFTNII--SSKFGNKVIKPSLEILVGI 124

Query: 429 PANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKE 481
           P+ V+  + +S +          +  +L   +L++       +    I      PND  E
Sbjct: 125 PSVVYGWVGISVLVPFIKNNVGGMGFSLLSGILVLSLMILPTIATLAIDAIKNIPNDHIE 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +     T W+    +I+PG     +TG +     A+  ++  ++     + L    L
Sbjct: 185 ASYGLGATRWQTISKVIVPGAKTGILTGVVLGIARAFGEALAVQMVIGNTVKLPEGLL 242


>gi|167585027|ref|ZP_02377415.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ubonensis Bu]
          Length = 285

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 64/192 (33%), Gaps = 10/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  +I S+  +  GI +G    ++     + Q+  + P  V   + V
Sbjct: 86  LLTQVWVTLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFV 145

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +     +      +++ F        N   G           A     +  +    ++
Sbjct: 146 IALGLGMASKIALAVVMVFFVVFG----NAFQGVREADRYLIANAQILGASRRQITTSVV 201

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P    + +     + G A   ++V E            G+G  I+ +    +   V   
Sbjct: 202 IPSALSWILASLHVSFGFALVGAVVGEFLG------SKQGIGLLISTAQGAFNASGVFAA 255

Query: 559 VLIMCCFVLALN 570
           ++++    LA +
Sbjct: 256 MIVLAVVALAAD 267



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 14/189 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        +I  +   +   +  +++ +  V    + I  SIP +   +  V+      
Sbjct: 93  TLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGM 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K+  A +   F +F         + +Q +    R L   ++    S  Q    + +P 
Sbjct: 153 ASKIALAVVMVFFVVFG--------NAFQGVREADRYLIANAQILGASRRQITTSVVIPS 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++  ++ ++ +S     F +V +   VVG+ +    GIG  I+ A    +   +  AM+ 
Sbjct: 205 ALSWILASLHVSFG---FALVGA---VVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIV 258

Query: 248 MLGVIFLYD 256
           +  V    D
Sbjct: 259 LAVVALAAD 267


>gi|328883293|emb|CCA56532.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces venezuelae ATCC 10712]
          Length = 228

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 68/174 (39%), Gaps = 15/174 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +     + +++I+L+     A L     R    ++ +  ++ +IP L   +  
Sbjct: 24  ELTDATLQHVGITVVSVLIALVVAVPLALLVRARPRFAGPVLGLTTLLYTIPSLAMFSLL 83

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +F       V G  L A        +  +  +    L ++P +  E +R       + 
Sbjct: 84  LPFFGLSAALVVTGLVLYA--------LTILVRNTLAGLASVPAETREAARGMGYGSLRL 135

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            W + +P ++P L+  + M+        V++  +    +V+   G+G+ I  A+
Sbjct: 136 LWQVELPLALPVLMAGIRMA-------TVSTIALTTVGSVVGRGGLGNLIEDAL 182



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 11/171 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++IA ++ +P+ + +  RP  +  +     LL   P+   F L++            
Sbjct: 37  VVSVLIALVVAVPLALLVRARPRFAGPVLGLTTLLYTIPSLAMFSLLLPFFGLSAALVVT 96

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      ++ N +AG ++ P + +E A        R    + LP   P  + G 
Sbjct: 97  GLVLYALTI----LVRNTLAGLASVPAETREAARGMGYGSLRLLWQVELPLALPVLMAGI 152

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             A       + V  V   G       GLG  I ++       +++   ++
Sbjct: 153 RMATVSTIALTTVGSVVGRG-------GLGNLIEDALPTFFKAQMLAASVL 196


>gi|227552022|ref|ZP_03982071.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|314939588|ref|ZP_07846815.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a04]
 gi|314941214|ref|ZP_07848110.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133C]
 gi|314948622|ref|ZP_07851997.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0082]
 gi|314953353|ref|ZP_07856280.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133A]
 gi|314993431|ref|ZP_07858796.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133B]
 gi|314995780|ref|ZP_07860869.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a01]
 gi|227178775|gb|EEI59747.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|313590052|gb|EFR68897.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a01]
 gi|313592096|gb|EFR70941.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133B]
 gi|313594629|gb|EFR73474.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133A]
 gi|313599938|gb|EFR78781.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133C]
 gi|313641128|gb|EFS05708.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0133a04]
 gi|313644953|gb|EFS09533.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium TX0082]
          Length = 316

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
                +S +    +A  AA        +    +L P+++++  IP + +    L+  V +
Sbjct: 100 FIVTFLSAIVATPFAIGAAVFMTEISPKNGTKILQPVIELLVGIPSVVYGFIGLSVIVPF 159

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  + 
Sbjct: 160 VRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGATRWQTIYK 218

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 219 VVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 252



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYIL 465
             +QP  +LL   P+ V+         P V S      + +    ++  +MI  T   + 
Sbjct: 131 KILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VT 187

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              +    A P  ++E + +   T W+    ++L    P  +T  +     A+  ++  +
Sbjct: 188 TMTVDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQ 247

Query: 526 VASWGHIHLRTTGL 539
           +   G+  L  TGL
Sbjct: 248 MV-IGNAALMPTGL 260


>gi|294791332|ref|ZP_06756489.1| putative ABC transporter, permease protein [Scardovia inopinata
           F0304]
 gi|294457803|gb|EFG26157.1| putative ABC transporter, permease protein [Scardovia inopinata
           F0304]
          Length = 266

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 73/203 (35%), Gaps = 14/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  SL   A  T+       ++++    +       S        P+L   Q++PI+   
Sbjct: 61  NRSSLLTAAYTTSCEAFIGFILAIGAGILLGVGLYVSHTFYASFYPLLVGAQTLPIITIA 120

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V++F     GK        I  +    ++ +     + L  +PR   +V+ +   + 
Sbjct: 121 PLFVIWFGYGSLGK--------IVLVAVFSLFPIAIQTCRGLIAVPRYFRDVALTCGATS 172

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
             + W++ +  +   +   + +S +  +     +E I   +      GIG ++  A    
Sbjct: 173 PWELWHVHIRVAARQIFSGIRISATYIFATAATAEYIGARN------GIGVWMQAAYNSF 226

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               +  A + ++ +  L   L+
Sbjct: 227 QTPMVFAATVVIIILTGLVMALV 249



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 10/196 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T     +  I+A    I +G+ +       +   P        P     PL 
Sbjct: 64  SLLTAAYTTSCEAFIGFILAIGAGILLGVGLYVSHTFYASFYPLLVGAQTLPIITIAPLF 123

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    Y  L       +L+   + + I      G  A P  F++VA +   T      ++
Sbjct: 124 VIWFGYGSLGK----IVLVAVFSLFPIAIQTCRGLIAVPRYFRDVALTCGATSPWELWHV 179

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +        +G   +    +  +  +E            G+G ++  +      P V  
Sbjct: 180 HIRVAARQIFSGIRISATYIFATAATAEYIG------ARNGIGVWMQAAYNSFQTPMVFA 233

Query: 558 GVLIMCCFVLALNRFL 573
             +++      +   +
Sbjct: 234 ATVVIIILTGLVMALV 249


>gi|290581382|ref|YP_003485774.1| putative osmoprotectant ABC transporter permease [Streptococcus
           mutans NN2025]
 gi|254998281|dbj|BAH88882.1| putative osmoprotectant ABC transporter permease protein
           [Streptococcus mutans NN2025]
          Length = 216

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++++ L       L AK  +L  V++   +++Q+IP L  ++  ++    
Sbjct: 21  LRHFLISIYGVLLAALVGIPMGILIAKRGKLKGVVMGAANVIQTIPSLAMISIIMLGLGL 80

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+  DL + ++   ++  Q+   + +
Sbjct: 81  G--------TKTVIATVFLYSLLPIIGNTYTGIKNVDGDLVDAAKGMGMTNRQQLLMVEL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 133 PLSLSVIMAGIR-------NALVVAVGITAIGAFVGGGGLGDIIIRGTNATNGGAIILAG 185



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 4/150 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV+          +  +++A+++ IP+GI I  R  +   +   A ++   P+     ++
Sbjct: 15  YVLAQFLRHFLISIYGVLLAALVGIPMGILIAKRGKLKGVVMGAANVIQTIPSLAMISII 74

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          +   +   +   I+ N   G      D  + A    +T  +    +
Sbjct: 75  MLGLGLGTKT----VIATVFLYSLLPIIGNTYTGIKNVDGDLVDAAKGMGMTNRQQLLMV 130

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            LP      + G   A   A   + +    
Sbjct: 131 ELPLSLSVIMAGIRNALVVAVGITAIGAFV 160


>gi|313890137|ref|ZP_07823772.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121498|gb|EFR44602.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 311

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S L    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L+ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 IRTLFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 11/172 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF 433
           +L  + +   +    ++  ++A+   I   +++    P   +  +QP  +LL   P+ V+
Sbjct: 81  ILGALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVY 140

Query: 434 --------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                    P + +            + +L +      + F  +    A P  ++E + +
Sbjct: 141 GFIGLQVIVPFIRTLFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLKAVPRHYREASMA 199

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    ++L    P   T  I     A+  ++  ++       + T+
Sbjct: 200 MGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPTS 251


>gi|24380451|ref|NP_722406.1| putative osmoprotectant ABC transporter; permease protein
           [Streptococcus mutans UA159]
 gi|24378479|gb|AAN59712.1|AE015033_7 putative osmoprotectant ABC transporter; permease protein
           [Streptococcus mutans UA159]
          Length = 218

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 15/180 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R  L  +  ++++ L       L AK  +L  V++   +++Q+IP L  ++  ++    
Sbjct: 23  LRHFLISIYGVLLAALVGIPMGILIAKRGKLKGVVMGAANVIQTIPSLAMISIIMLGLGL 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                        I  +F   +  +  + Y  + N+  DL + ++   ++  Q+   + +
Sbjct: 83  G--------TKTVIATVFLYSLLPIIGNTYTGIKNVDGDLVDAAKGMGMTNRQQLLMVEL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +          +V +  I      +   G+G  I       +  AI+ A 
Sbjct: 135 PLSLSVIMAGIR-------NALVVAVGITAIGAFVGGGGLGDIIIRGTNATNGGAIILAG 187



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 4/150 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV+          +  +++A+++ IP+GI I  R  +   +   A ++   P+     ++
Sbjct: 17  YVLAQFLRHFLISIYGVLLAALVGIPMGILIAKRGKLKGVVMGAANVIQTIPSLAMISII 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          +   +   +   I+ N   G      D  + A    +T  +    +
Sbjct: 77  MLGLGLGTKT----VIATVFLYSLLPIIGNTYTGIKNVDGDLVDAAKGMGMTNRQQLLMV 132

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            LP      + G   A   A   + +    
Sbjct: 133 ELPLSLSVIMAGIRNALVVAVGITAIGAFV 162


>gi|229016044|ref|ZP_04173000.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1273]
 gi|229022263|ref|ZP_04178808.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1272]
 gi|228739066|gb|EEL89517.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1272]
 gi|228745277|gb|EEL95323.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1273]
          Length = 296

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSLGAVVISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TYGAVIFIVGSTLVSLGAVVISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|333024821|ref|ZP_08452885.1| putative permease membrane component [Streptomyces sp. Tu6071]
 gi|332744673|gb|EGJ75114.1| putative permease membrane component [Streptomyces sp. Tu6071]
          Length = 256

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A +    +   MVI+ +   +    + +S   G +       + ++P L  +   
Sbjct: 54  QLLSDAYQHASAVFQCMVIATVIGVLIGVFSYRSEWAGNLATTATSTILTVPSLALIGLL 113

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V                  + ++    +  +  +    L  +   L + ++   +S   +
Sbjct: 114 VPIVGLGV--------APTVISLVLYGLLPIVRNAIVGLRGVDATLVDAAKGIGMSRTAR 165

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + +S +     + A      G      PG+G+ I   I      
Sbjct: 166 LLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGIASLGSK 218

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             L  +L     I +   L 
Sbjct: 219 NALNQVLAGTVGIVILALLF 238



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA++I + +G++        +        +   P+     L+V  V        
Sbjct: 66  VFQCMVIATVIGVLIGVFSYRSEWAGNLATTATSTILTVPSLALIGLLVPIVGLGVAPTV 125

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 126 ISLVLYGLL----PIVRNAIVGLRGVDATLVDAAKGIGMSRTARLLRVELPLAWPPILTG 181

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +      +   IA    K +  +V+ G + +    L  
Sbjct: 182 IRVSTQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSKNALNQVLAGTVGIVILALLF 238

Query: 570 N 570
           +
Sbjct: 239 D 239


>gi|163938640|ref|YP_001643524.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           weihenstephanensis KBAB4]
 gi|163860837|gb|ABY41896.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           weihenstephanensis KBAB4]
          Length = 296

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSLGAVVISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TYGAVIFIVGSTLVSLGAVVISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|326779052|ref|ZP_08238317.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659385|gb|EGE44231.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 288

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 8/178 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R   +L      +V    + I    +  I  +      + + W   + +  +    ++  
Sbjct: 50  RKLVVLPAVLVVIVVATYVWITNIHLDSIAENSLTGGNVQLRWWQHVRLTAISTFWVL-- 107

Query: 399 IIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           II IP+GI +  R     +      A +  A PA     L+V  +        + + +  
Sbjct: 108 IIAIPLGIALTRRRLRKAAPAFTALANIGQATPAIGLLALLVIWLGIGPRTAIIGIVIYA 167

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +      +L N +AG  A   +  E A    ++G      + LP   P  + G  TA 
Sbjct: 168 VL----PVLSNTVAGLRAIEPNMIEAARGMGMSGRGVLLKVELPLAVPLILAGVRTAL 221



 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    L+          + R  +       + +I Q+ P +G L   V++         
Sbjct: 101 ISTFWVLIIAIPLGIALTRRRLRKAAPAFTALANIGQATPAIGLLALLVIWLGIG----- 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  I    V  +  +    L  I  ++ E +R   +SG      + +P ++P 
Sbjct: 156 ---PRTAIIGIVIYAVLPVLSNTVAGLRAIEPNMIEAARGMGMSGRGVLLKVELPLAVPL 212

Query: 192 LVWNMMMSM 200
           ++  +  ++
Sbjct: 213 ILAGVRTAL 221


>gi|333024823|ref|ZP_08452887.1| putative permease membrane component [Streptomyces sp. Tu6071]
 gi|332744675|gb|EGJ75116.1| putative permease membrane component [Streptomyces sp. Tu6071]
          Length = 329

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 80/251 (31%), Gaps = 18/251 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
           G    H      ++    R      + +   V  +A+   W          T   +    
Sbjct: 67  GPRDEHDAPRGGRVERASRRIGWRKLTFLPFVLALALLGTWIYYD----TATLDVIARNS 122

Query: 381 WLGCITMFRV-------VVLIIIASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPAN 431
             G     RV       V+      II IP+GI +  +    +      FA +  A PA 
Sbjct: 123 LGGGNIWLRVRQHIQLTVISTFFVLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPAL 182

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
               L+V  +        + + +  I      +L N IAG  A      E A    ++  
Sbjct: 183 GLLALLVIWLGTGEFPALVGIIIYAIL----PVLSNTIAGLRANDPTLLEAARGIGMSPL 238

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
                + LP   P  ++G  TA       A++ +     G   + T G+          G
Sbjct: 239 MVLGKVELPLAVPLILSGVRTALVLNVGTATLATFGGGGGLGDIITAGITNQRMSVLVIG 298

Query: 551 SFPEVVLGVLI 561
           S   +VL +L+
Sbjct: 299 SILTIVLALLV 309



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 10/184 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                    +  ++ + L G         +  I   +L   ++     +     + +   
Sbjct: 86  RIGWRKLTFLPFVLALALLGTWIYYDTATLDVIARNSLGGGNIWLRVRQHIQLTVISTFF 145

Query: 79  SLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            L+       L  + R  +   V V   +I Q+ P LG L   V++            E 
Sbjct: 146 VLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTG--------EF 197

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+  I    +  +  +    L      L E +R   +S       + +P ++P ++  +
Sbjct: 198 PALVGIIIYAILPVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILSGV 257

Query: 197 MMSM 200
             ++
Sbjct: 258 RTAL 261


>gi|331085125|ref|ZP_08334211.1| hypothetical protein HMPREF0987_00514 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407908|gb|EGG87398.1| hypothetical protein HMPREF0987_00514 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 260

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 67/175 (38%), Gaps = 10/175 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  +V  ++   I +   + + F P +S  ++P+  +L + P +   PL+
Sbjct: 71  SIFLHVGVTVYETIVSFLLVIFIALLCAVLLWFSPKLSEIMEPYLVVLNSLPKSALAPLL 130

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + ++         +  ++  + H T +     +
Sbjct: 131 IVWLGATQTTIIVSGMSVAIFGS----ILSLYTSFHTVDQEKIKLIYTLHGTRFHALTKV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
           ++P   P  ++      G      I+ E  +         GLG  I  S++   +
Sbjct: 187 VIPHSIPAIISNMKVNIGLCLVGVIIGEFLA------ARNGLGYLIIYSSQVLRW 235



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 66/175 (37%), Gaps = 14/175 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   T    + + ++ +    + A L   S +L  ++ P L ++ S+P        +V+ 
Sbjct: 75  HVGVTVYETIVSFLLVIFIALLCAVLLWFSPKLSEIMEPYLVVLNSLPKSALAPLLIVWL 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            S+Y S   + ++  ++  +   + +     +
Sbjct: 135 GATQTTIIVSGMSVAIFGSI--------LSLYTSFHTVDQEKIKLIYTLHGTRFHALTKV 186

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            +P S+P ++ NM +++      V+  E +   +      G+G  I  + +    
Sbjct: 187 VIPHSIPAIISNMKVNIGLCLVGVIIGEFLAARN------GLGYLIIYSSQVLRW 235


>gi|327191933|gb|EGE58917.1| putative nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CNPAF512]
          Length = 375

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 89/277 (32%), Gaps = 15/277 (5%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G ++  FF  L        R +  +    P       + Q +   +   W  ++   A  
Sbjct: 87  GMATRAFFLLLFACWLLAWRCVTELSKQQPVTAFGKSALQLLIPAIFGAWILILWEAATR 146

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFR------VVVLIIIASIIWIPVGIWIGFRP 412
            A      +         +           R      V++  II  +    V +      
Sbjct: 147 GAGIPFIILPPPSAIGTRIMASLPILGDDVRQTIFKAVLIGYIIGCLSGFIVAVLADRVA 206

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   +++A P     P++V    +   +     + ++I  T + +L N +AG 
Sbjct: 207 FLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSK----AAVVIIMTFFPMLVNTVAGL 262

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A  +  +++  ++  + W+    + LP   P+           A   +IV+E      +
Sbjct: 263 AASGSMERDLMRTYASSDWQTLLKLKLPAAMPFIFNALKINSTLALIGAIVAEFFGTPIV 322

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G+G  I+    + +   V   + +        
Sbjct: 323 -----GMGFRISTEIGRMNVDMVWAEIAVAALAGSIF 354



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 93/240 (38%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF     +L                 P  I   +  +L +  L     +T  + 
Sbjct: 126 QLLIPAIFGAWILILWEAATRGAGIPFIILPPPSAIGTRIMASLPI--LGDDVRQTIFKA 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   +I  L  F+ A LA +   L   L+PI +++ ++PI+G     V++F   +P K 
Sbjct: 184 VLIGYIIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++  S WQ    L +P +MP 
Sbjct: 244 A--------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLLKLKLPAAMPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  I   ++  +++A + +  +
Sbjct: 296 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVD-MVWAEIAVAAL 349


>gi|302342495|ref|YP_003807024.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfarculus baarsii DSM 2075]
 gi|301639108|gb|ADK84430.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfarculus baarsii DSM 2075]
          Length = 325

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 84/215 (39%), Gaps = 12/215 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY 122
           AS T +    A+ + +        +A    R   ++ P ++++ S+P  +LGF+   ++ 
Sbjct: 103 ASVTLVSSAIAVPLGVGAALYIGEVAGH--RAREIIKPGVELLASLPSVVLGFVGMVIIA 160

Query: 123 --FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                          L+A   +    +  +T     +L  +P DL E S +   + W+  
Sbjct: 161 PELQRWLDVPSGLNILSASLMLAIMAIPTITSISEDALRAVPGDLREASLALGATRWETL 220

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIK 234
             + VP ++ G+   +++ MS      +   M+  G   I       +  + + IA  + 
Sbjct: 221 RKVQVPAALSGIGTGVILGMSRAMGETMVVLMVAGGAAQIPSSIFDSVRPMPATIAAEMG 280

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           E  + +  Y  L  + ++     L F  +  W +K
Sbjct: 281 ETPVGSAHYHALFAIAIVLFMMTLGFNLVAAWISK 315



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           +    G  R  +       C    +  M  I  F    G  +  A     +++ H+ Y  
Sbjct: 28  IASNGGPEREVWIRRVFIFCGLFSLLVMGLIVVFLFSEGAGVLGAVSLGDFLLGHYWYPT 87

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFP 429
                      +     + +++S I +P+G+                 I+P  +LLA+ P
Sbjct: 88  YEPPDLGILPLIVGSASVTLVSSAIAVPLGVGAALYIGEVAGHRAREIIKPGVELLASLP 147

Query: 430 ANVFFPLVVSCVSYYHL--------NPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFK 480
           + V    V   +    L          N+  + LM+       + ++      A P D +
Sbjct: 148 SVV-LGFVGMVIIAPELQRWLDVPSGLNILSASLMLAIMAIPTITSISEDALRAVPGDLR 206

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           E + +   T W   R + +P       TG I     A   ++V  + + G   + ++
Sbjct: 207 EASLALGATRWETLRKVQVPAALSGIGTGVILGMSRAMGETMVVLMVAGGAAQIPSS 263


>gi|229070391|ref|ZP_04203636.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus F65185]
 gi|228712745|gb|EEL64675.1| aliphatic sulfonates transport permease protein ssuC [Bacillus
           cereus F65185]
          Length = 135

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 6/120 (5%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + GA  +
Sbjct: 2   LLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLS 61

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G AW + +V+E+         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 62  LGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFALVGKFSDSLV 115



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 9/139 (6%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I     + +  + +  +  +   L +V+R    S  +    L +P ++P L+    +
Sbjct: 1   MLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARL 60

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD-- 256
           S+   W  +V +E++          GIG  I  A +  +   +   ++    V    D  
Sbjct: 61  SLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFALVGKFSDSL 114

Query: 257 -QLLFRPMIVWSNKFRLER 274
            +LL    + W + F+ E 
Sbjct: 115 VRLLEVKFLRWRDNFKGET 133


>gi|15599085|ref|NP_252579.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|116051927|ref|YP_789230.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254236789|ref|ZP_04930112.1| hypothetical protein PACG_02802 [Pseudomonas aeruginosa C3719]
 gi|296387591|ref|ZP_06877066.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313109312|ref|ZP_07795279.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9950071|gb|AAG07277.1|AE004806_4 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115587148|gb|ABJ13163.1| putative permease of ABC-type transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168720|gb|EAZ54231.1| hypothetical protein PACG_02802 [Pseudomonas aeruginosa C3719]
 gi|310881781|gb|EFQ40375.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 220

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ D   V  L    +  V+V + +A ++ +P+G+ +     ++  +Q  A ++   P+
Sbjct: 7   LSHLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              F L++   S +        ++  +   +   IL N     +      +E      +T
Sbjct: 67  IALFGLLMPVYSVFGQGLGPLPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+  R + +P   P  + G  TA         ++ V   G       GLG  I  S  +
Sbjct: 127 FWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSISQ 179

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
            + P +V+G +++    +  +  L
Sbjct: 180 SNMPMLVVGAVLVSLLAIVADLLL 203



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 82/205 (40%), Gaps = 10/205 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +  L +L A+ +++L       L  +   L   L     +M +IP + 
Sbjct: 9   HLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +  +     G      L AI A+F   +  +  + Y +L  +   + E  +   +
Sbjct: 69  LFGLLMPVYSVFGQGLGP---LPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G  I  +I 
Sbjct: 126 TFWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSIS 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
           + ++  ++   + +  +  + D LL
Sbjct: 179 QSNMPMLVVGAVLVSLLAIVADLLL 203


>gi|332523506|ref|ZP_08399758.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314770|gb|EGJ27755.1| phosphate ABC transporter, permease protein PstC [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 311

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S L    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 92  FLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 151

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 152 IRTIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGATRWQTIWR 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 211 VVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSA 246



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 11/172 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF 433
           +L  + +   +    ++  ++A+   I   +++    P   +  +QP  +LL   P+ V+
Sbjct: 81  ILGALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVY 140

Query: 434 --------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                    P + +            + +L +      + F  +    A P  ++E + +
Sbjct: 141 GFIGLQVIVPFIRTIFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLKAVPRHYREASMA 199

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    ++L    P   T  I     A+  ++  ++       + T+
Sbjct: 200 MGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMPTS 251


>gi|259416937|ref|ZP_05740857.1| D-methionine transport system permease protein MetI [Silicibacter
           sp. TrichCH4B]
 gi|259348376|gb|EEW60153.1| D-methionine transport system permease protein MetI [Silicibacter
           sp. TrichCH4B]
          Length = 224

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L +   +T   +  + ++  LF     T  A S+R  ++  P ++          +S+P 
Sbjct: 9   LIEATGQTLYMVAISTLLGTLFGLPLGTFLATSQRGELLSAPWINKVLGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  + V  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRLVAGTSIGTT-AAIVPLTLAAVPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG+   + +++
Sbjct: 127 GATPIQIIRKVLIPEALPGITLGLTLAV 154



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 12/155 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  ++ ++  +P+G ++           P I+  +        + P  +   + 
Sbjct: 16  TLYMVAISTLLGTLFGLPLGTFLATSQRGELLSAPWINKVLGLVVNATRSVPFIILV-VA 74

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +      ++  +  ++        +I   V        +   E A +   T  +  
Sbjct: 75  IIPFTRLVAGTSIGTTAAIVPLTLAAVPFIARLVENAIREVDSGLIEAARAMGATPIQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           R +++P   P    G   A       S +      
Sbjct: 135 RKVLIPEALPGITLGLTLAVVSLIGYSAMVGAVGG 169


>gi|225868631|ref|YP_002744579.1| phosphate ABC transporter permease [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701907|emb|CAW99412.1| putative phosphate ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 311

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A           ++S L    +A  AA        +    +L P ++++  IP + +   
Sbjct: 84  ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +  +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   
Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + WQ  W + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 246



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  ++A+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 82  LGALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 141

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 142 FIGLQVVVPFIRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 200

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + T+
Sbjct: 201 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPTS 251


>gi|251798663|ref|YP_003013394.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247546289|gb|ACT03308.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 271

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 94/257 (36%), Gaps = 14/257 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VHSLPQYASRTTLRMLSAM 76
           +   +++       L  I     P   +  + + ++       +L +  + T    +   
Sbjct: 19  VAGALVLWEAAAWYLADIAHVLAPASKLPYLHLVIEALIKHWSTLAEQGAVTFGNSILGF 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I        A + + SR + + L P +   Q +PI+G          +    +V+ A  
Sbjct: 79  LIGTGVGTALAIIMSLSRTIELTLSPYMIASQMVPIIGLAPILYGIIHDPAMSRVLMAGY 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
              F         +   M + L +I  + E++ RS+  S W  +  L +  S+PGL   +
Sbjct: 139 VTFF--------PVAIHMLRGLQSIKPEQEDLMRSYAASAWTTYTKLRLMASLPGLFAGL 190

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            +S        +  E++   + +  L  + S    + +     + +   + +  + FL  
Sbjct: 191 KLSAPLAITASIIVELMGAPNGIGVLM-LSSLYYGSSQVYMFWSTILVSVVIGLIWFLLV 249

Query: 257 QLLFRPMIVWSNKFRLE 273
            L  R +  W  +FR +
Sbjct: 250 TLAERLLTPWQPEFRSQ 266



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
             +   V +    ++   +  V    +     ++V     +    +   G +T    ++ 
Sbjct: 18  WVAGALVLWEAAAWYLADIAHVLAPASKLPYLHLVIEALIKHWSTLAEQGAVTFGNSILG 77

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +I + +   + I +     I   + P+       P     P++   +     +P +   
Sbjct: 78  FLIGTGVGTALAIIMSLSRTIELTLSPYMIASQMVPIIGLAPILYGII----HDPAMSRV 133

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L+  + T + +  +++ G  +   + +++  S+  + W  +  + L    P    G   +
Sbjct: 134 LMAGYVTFFPVAIHMLRGLQSIKPEQEDLMRSYAASAWTTYTKLRLMASLPGLFAGLKLS 193

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              A  ASI+ E+    +      G+G  +  S   GS    +    I+   V+     +
Sbjct: 194 APLAITASIIVELMGAPN------GIGVLMLSSLYYGSSQVYMFWSTILVSVVIG---LI 244

Query: 574 WHPLYLYGTRCL 585
           W  L     R L
Sbjct: 245 WFLLVTLAERLL 256


>gi|189423689|ref|YP_001950866.1| phosphate ABC transporter inner membrane protein [Geobacter lovleyi
           SZ]
 gi|189419948|gb|ACD94346.1| phosphate ABC transporter, inner membrane subunit PstA [Geobacter
           lovleyi SZ]
          Length = 530

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +L   V SL F  + A      AK  RL  ++   ++ +  +P + +  F + +F+
Sbjct: 285 TVMMVLLMSVFSLPFGVIAAIYLREYAKEGRLVQLVRIAVNNLAGVPSIVYGVFGLGFFV 344

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
               G +                G  L A   +    V  +  +  +SL +IP+ + E S
Sbjct: 345 YGIGGSLDKLFFPERLPTPVFGTGGILWASLTLALLTVPVVIVATEESLASIPKGIREGS 404

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + +Q    + +P + PG++  +++SM+  
Sbjct: 405 LALGATKFQTLTKVLLPMATPGIMTGLVLSMARA 438



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVFFPLVVS 439
           +F  V+++++ S+  +P G+         +K     QL       LA  P+ V+    + 
Sbjct: 282 IFGTVMMVLLMSVFSLPFGVIAAIYLREYAKEGRLVQLVRIAVNNLAGVPSIVYGVFGLG 341

Query: 440 CVSY-------------------YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              Y                   +     LW SL +   T   ++       ++ P   +
Sbjct: 342 FFVYGIGGSLDKLFFPERLPTPVFGTGGILWASLTLALLTVPVVIVATEESLASIPKGIR 401

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           E + +   T ++    ++LP   P  +TG + +   A        +  
Sbjct: 402 EGSLALGATKFQTLTKVLLPMATPGIMTGLVLSMARAVGEVAPLMMVG 449


>gi|15889661|ref|NP_355342.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157563|gb|AAK88127.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 290

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 66/187 (35%), Gaps = 9/187 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V+   ++   +   V I I   P +   + P    ++A P     P++V    +   
Sbjct: 94  LKSVLTGYVLGCGLGFLVAILIDRSPFLQRGLLPIGNFVSALPVVGIAPIMVMWFGFDWQ 153

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +       +++  T + +L N + G +A  +  +++  ++     +    + LP  +P+ 
Sbjct: 154 SK----VAVVVIMTFFPMLVNTVQGLAASSHMERDLMRTYAAGWGQTLLKLRLPAAWPFI 209

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                     A   +IV+E      +     G+G  I+    + +   V   + +     
Sbjct: 210 FNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISAEMGRSNVDMVWAEIAVAALAG 264

Query: 567 LALNRFL 573
                 +
Sbjct: 265 SGFYGLV 271



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 73/180 (40%), Gaps = 14/180 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L+  V+     F+ A L  +S  L   L+PI + + ++P++G     V++F   +  K 
Sbjct: 97  VLTGYVLGCGLGFLVAILIDRSPFLQRGLLPIGNFVSALPVVGIAPIMVMWFGFDWQSK- 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  +  +     + M  +  Q L        ++ R++     Q    L +P + P 
Sbjct: 156 -------VAVVVIMTFFPMLVNTVQGLAASSHMERDLMRTYAAGWGQTLLKLRLPAAWPF 208

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  +   ++  +++A + +  +
Sbjct: 209 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISAEMGRSNVD-MVWAEIAVAAL 262


>gi|229010144|ref|ZP_04167357.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           DSM 2048]
 gi|229131663|ref|ZP_04260544.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST196]
 gi|229165655|ref|ZP_04293427.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH621]
 gi|228617829|gb|EEK74882.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH621]
 gi|228651811|gb|EEL07767.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST196]
 gi|228751141|gb|EEM00954.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           DSM 2048]
          Length = 297

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STLVSLGAVVISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           TY  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TYGAVIFIVGSTLVSLGAVVISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|121607384|ref|YP_995191.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
 gi|121552024|gb|ABM56173.1| binding-protein-dependent transport systems inner membrane
           component [Verminephrobacter eiseniae EF01-2]
          Length = 259

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 10/160 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               +       ++L   P     PL +    +           ++ F T W +L  V +
Sbjct: 92  SRRAAQLGFLSIEVLRPVPCVALIPLSMLTFGFG----VRMELGIVAFATFWPLLVLVQS 147

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     EV+    ++       I+LP I P            A   ++  E+A+  
Sbjct: 148 AVQQIEPRLLEVSRVLGLSARERTFKIVLPAIVPRLFVALRLGVALALVVAVTVEIAANP 207

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           +      G+G  +  + +      ++  +  +     A+N
Sbjct: 208 Y------GMGYAMMIAQQSFEPALMLAWLGWIGVVGFAVN 241



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 14/235 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LLA             G      P      +       SL      T       +++   
Sbjct: 21  LLAAAFEWYARRAAALGSDALAPPSAATRALVGAALDGSLWHATGFTLGTAALGLLLGTA 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                  +   SRR   +    +++++ +P +  +  +++ F      ++          
Sbjct: 81  LGLALGLVLGISRRAAQLGFLSIEVLRPVPCVALIPLSMLTFGFGVRMELG--------I 132

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +  +  W +   +  ++  I   L EVSR   LS  ++ + + +P  +P L   + + ++
Sbjct: 133 VAFATFWPLLVLVQSAVQQIEPRLLEVSRVLGLSARERTFKIVLPAIVPRLFVALRLGVA 192

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                 V  E+           G+G  + +A +  +   +L  +  +  V F  +
Sbjct: 193 LALVVAVTVEIAA------NPYGMGYAMMIAQQSFEPALMLAWLGWIGVVGFAVN 241


>gi|315029509|gb|EFT41441.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4000]
          Length = 313

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A            +S +    +A  AA        ++    L P+++++  IP + +   
Sbjct: 89  ALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVYGFI 148

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 149 GLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGA 207

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 208 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 249



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 63/174 (36%), Gaps = 15/174 (8%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +     +  I+A+   I   +++        +  +QP  +LL   P+ V+
Sbjct: 86  MVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVY 145

Query: 434 --------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                    P V S      + +    ++  +MI  T   +    +    A P  ++E +
Sbjct: 146 GFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VTTMTVDALKAVPRHYREAS 202

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   T W+    ++L    P  +T  +     A+  ++  ++       + T 
Sbjct: 203 LALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAAVMPTN 256


>gi|133930593|gb|ABO43867.1| permease protein [Lactobacillus reuteri]
          Length = 207

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           VV ++I+ II +P+G        ++     FAQLL   P+     L++  +    +   +
Sbjct: 28  VVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        +L N I G +     +KEV  +  +   R  R I +P   PY + G 
Sbjct: 88  ALIVL----ALPPLLINTILGFNEVSPLYKEVGIALGMDQRRLRRQIEIPLALPYILNGI 143

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A      +A++ + + + G   L  TGLG Y       G+    +L +L M  F   +
Sbjct: 144 KLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLI 203



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +     QY  +  +  +  +VIS++       + ++ + +    V    +++ IP L  
Sbjct: 11  TNSGQYWQYVGQHIILTVVTLVISMIIALPLGYIGSRIKPVAQFCVMFAQLLRIIPSLAL 70

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   + +             + A+ A+    +  +  +       +    +EV  +  + 
Sbjct: 71  LFLLIPFIGTGV--------VPALIALIVLALPPLLINTILGFNEVSPLYKEVGIALGMD 122

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             +    + +P ++P ++  + +++      ++AS  +    T I   G+G+ I   +  
Sbjct: 123 QRRLRRQIEIPLALPYILNGIKLAL----VEIIASATLA---TYIGAGGLGTLIFTGLGL 175

Query: 236 QDLLAILYAMLTMLGVIFL 254
            D+  ++   +++  +  L
Sbjct: 176 YDMSYVVIGAVSVAILSLL 194


>gi|330467746|ref|YP_004405489.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
 gi|328810717|gb|AEB44889.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
          Length = 271

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 70/198 (35%), Gaps = 14/198 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V ++IA +  + VG  +G  P +          L   P+      V+  V    
Sbjct: 74  TLLVSAVGLLIALVAGVVVGFAVGSVPWLLRAASSTLDFLRPVPSI-----VLIPVLVLV 128

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L+      LL+     W +LF V+ G         + A +  +       ++  P + PY
Sbjct: 129 LDVGQITVLLVAVSCFWIVLFQVLYGLRDVDQVAVDTARTIRLGRLGRIIHVTWPSVLPY 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             T            S+   +A  G + +   GLG  I  S E G F  +   VL+    
Sbjct: 189 LGTALRL------IVSVALALAITGGLVMGAAGLGELIWSSQESGEFTGMYALVLLTGGV 242

Query: 566 VLALN---RFLWHPLYLY 580
            +AL+   R     L  +
Sbjct: 243 GIALDMAARLAERRLLHW 260



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 89/276 (32%), Gaps = 18/276 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           +   P   + R    I  LL   +    +               IV      L       
Sbjct: 10  HTRRPAGTTGRRVLGILGLLLAAIGYEAVTRAFFSPLHVPPLTAIVPRAAELLTEARFWT 69

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
              RT L     ++I+L+   V          L       LD ++ +P +          
Sbjct: 70  ATGRTLLVSAVGLLIALVAGVVVGFAVGSVPWLLRAASSTLDFLRPVPSIV--------- 120

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +      V+      +  +  S  W + F +   L ++ +   + +R+ RL    +  ++
Sbjct: 121 LIPVLVLVLDVGQITVLLVAVSCFWIVLFQVLYGLRDVDQVAVDTARTIRLGRLGRIIHV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P  +P L   + + +S      VA  + + G  V+   G+G  I  + +  +   +  
Sbjct: 181 TWPSVLPYLGTALRLIVS------VALALAITGGLVMGAAGLGELIWSSQESGEFTGMYA 234

Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTT 276
            +L   GV    D   +L  R ++ W    R E   
Sbjct: 235 LVLLTGGVGIALDMAARLAERRLLHWHVATRREVAA 270


>gi|260427636|ref|ZP_05781615.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260422128|gb|EEX15379.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 586

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 62/452 (13%), Positives = 137/452 (30%), Gaps = 32/452 (7%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + + P  ++ +    +FA+  + +     +M  +L  +   L + S +   +  Q FW +
Sbjct: 145 IGIAPDALLYSNTTVVFAMAHTMLPLAVITMLPALQQVDARLMQASATLGATSGQGFWTV 204

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P SM G+    +++      F +   ++      +    +G  I + I +        
Sbjct: 205 MLPLSMRGISAAGLLTFVASLGFFITPSLVGGPKQTM----LGQLIIMQINQLQNWQQGA 260

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           A+  +L +  L    +F         F +    G   A              R   +   
Sbjct: 261 ALAVVLLISALVAVFVF------DQVFGISSVAGGSGA------------APRRHDHPIR 302

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
            F   LS  + ++ R +G          L         ++L +     +           
Sbjct: 303 RFGIWLSEGLGRISRAIGGHMSERTGRILLSTFAAVTVFVLLVPVVAFIPMAFEDSPNLF 362

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-----RPHISSKI 418
                    +   L+   L    + R V + +  + + + VG          +   S+ I
Sbjct: 363 FPPQTLSMRWFHELFASPLWTSAIVRSVGIGLATAALTLVVGGLAALALVKGKSKASTAI 422

Query: 419 QPFAQLLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
                     P       L         +  NL + +         +   ++     +  
Sbjct: 423 FLLFLAPMVIPPIALAVSLFYLFAQIGLVATNLGIIIGHCVIAVPIVFVILLTTFKGYDW 482

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              +V+ +   +  + WR + LP +    V G IT    ++    V+     G       
Sbjct: 483 RLNDVSLTLGASKLQTWRKVALPLMKGGLVAGFITGFLQSFEELTVALFVGGGLKTT--- 539

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            L   + +S    + P +    +I+   VL  
Sbjct: 540 -LPRQMWDSINLQATPVIAAASVIVLLIVLVF 570


>gi|228923541|ref|ZP_04086822.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836118|gb|EEM81478.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 191

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 70/162 (43%), Gaps = 12/162 (7%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           +  I+ +++   +  ++ + P ++  + P+  +L A P     P+++         PN+ 
Sbjct: 6   LGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG-----PNIS 60

Query: 452 LSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            S+ M +  +    +  + +      +++ +V ++F    W+ ++ ++LP  FP  ++  
Sbjct: 61  SSIAMGVIISIIITILVIYSAFQEVDSNYIKVMNTFGANKWQCYKQVVLPASFPAIISTL 120

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               G +W   I  E+       +   GLG  I+   +  +F
Sbjct: 121 KVNVGLSWVGVIFGELL------VSKQGLGYLISYGFQVFNF 156



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 71/191 (37%), Gaps = 14/191 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L      ++  +   + AT       L  VL P L ++ ++P +      +V F     
Sbjct: 1   MLETGLGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFGPNIS 60

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    + +I              +Y +   +  +  +V  +F  + WQ +  + +P S
Sbjct: 61  SSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVMNTFGANKWQCYKQVVLPAS 112

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  + +++   W  V+  E++V         G+G  I+   +  +   +L ++L  
Sbjct: 113 FPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLISYGFQVFNFTLVLLSVLLT 166

Query: 249 LGVIFLYDQLL 259
             +  L    +
Sbjct: 167 CVLATLMYVFV 177


>gi|83592978|ref|YP_426730.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575892|gb|ABC22443.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 261

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 90/243 (37%), Gaps = 14/243 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  ++ +  +  +L G +   +P        +     ++  +A  T L ++  + +  L 
Sbjct: 21  LGALIGLWHLAFVLAGARPYLLPSPWQTAQALIGRWPTILPHAGTTALEIVLGLGLGTLL 80

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A   A S  +  +L+P+L I Q+IP+       V++       KV  A L   F +
Sbjct: 81  GALSALTIALSPLMRRMLLPLLVISQAIPVFAIAPLLVLWLGYGLASKVAMATLVIYFPV 140

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T+            L        +++R+   S       + +P ++P L   + ++ + 
Sbjct: 141 TTA--------FLDGLRRTEPGWLDLARTMGASPLSTLLRIRLPAALPALASGLRVATA- 191

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
                VA    VVG+ V    G+G  +  A     +  +  A+  +         L+ R 
Sbjct: 192 -----VAPIGAVVGEWVGSSAGLGYLMLHANARMQIDLMFAALFVLTVFSLGLYALVDRT 246

Query: 263 MIV 265
           +  
Sbjct: 247 LRA 249



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++     T   +V+ + + +++     + I   P +   + P   +  A P     P
Sbjct: 56  WPTILPHAGTTALEIVLGLGLGTLLGALSALTIALSPLMRRMLLPLLVISQAIPVFAIAP 115

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  + Y   +     +L++ F     +    + G       + ++A +   +      
Sbjct: 116 LLVLWLGYGLASKVAMATLVIYF----PVTTAFLDGLRRTEPGWLDLARTMGASPLSTLL 171

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I LP   P   +G   A   A   ++V E          + GLG  +  +  +     +
Sbjct: 172 RIRLPAALPALASGLRVATAVAPIGAVVGEWVG------SSAGLGYLMLHANARMQIDLM 225

Query: 556 VLGVLIMCCFVLALNRFLWHPL 577
              + ++  F L L   +   L
Sbjct: 226 FAALFVLTVFSLGLYALVDRTL 247


>gi|150009022|ref|YP_001303765.1| putative ABC transporter permease [Parabacteroides distasonis ATCC
           8503]
 gi|298375745|ref|ZP_06985701.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_19]
 gi|149937446|gb|ABR44143.1| putative ABC transporter permease protein [Parabacteroides
           distasonis ATCC 8503]
 gi|298266782|gb|EFI08439.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           3_1_19]
          Length = 395

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+ +SL F    A   A+  + +   +L PI++++  IP + +    L   V      
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 362

Query: 241 ILYAMLTMLGVIFLYDQL 258
             Y  L MLG +     L
Sbjct: 363 AHYQALFMLGAVLFLITL 380



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I ++    + V I++         + ++P  +LLA  P+ V+         PL+   
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +           S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 339


>gi|328886800|emb|CCA60039.1| hypothetical protein SVEN_6753 [Streptomyces venezuelae ATCC 10712]
          Length = 259

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 48/167 (28%), Gaps = 4/167 (2%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
            L        + +   +   +   VA G+                   +      ++ R 
Sbjct: 14  RLGPALGTAGAVLALWYLLALSGAVAPGLLPTPTETAAALADSARSGILAADLGASLARA 73

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                + +++   +G   G+ P +S+ + P    L   PA    PL  +          L
Sbjct: 74  GQGFALGALVGSALGFATGYLPKLSAAVTPVVSFLRPIPAIALVPLATAWFGIGETAKRL 133

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
            ++  ++     Y    V  G S  P      A +      R +  +
Sbjct: 134 LIAYAVLLAVWLY----VHDGVSRVPVSHLRAARTLGAPLHRRFTEV 176



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 50/162 (30%), Gaps = 10/162 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA   ++ +   +  G+     P +    +  +     L      +  R      +  L
Sbjct: 25  VLALWYLLALSGAVAPGL--LPTPTETAAALADSARSGILAADLGASLARAGQGFALGAL 82

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                        +L   + P++  ++ IP +  +     +F      K +    A + A
Sbjct: 83  VGSALGFATGYLPKLSAAVTPVVSFLRPIPAIALVPLATAWFGIGETAKRLLIAYAVLLA 142

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +           ++  +  +P      +R+      ++F  +
Sbjct: 143 V--------WLYVHDGVSRVPVSHLRAARTLGAPLHRRFTEV 176


>gi|78187105|ref|YP_375148.1| phosphate ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78167007|gb|ABB24105.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Chlorobium luteolum DSM 273]
          Length = 448

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 8/154 (5%)

Query: 79  SLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++LF F    +AA       K      +L      +  +P + F  F + +F+N      
Sbjct: 233 AMLFAFPLGVVAAIYFTEYAKDGVFTSMLRSANSTLAGVPSIVFGLFGLAFFINTLNVSE 292

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +  +  +++  +P+  +E S     + W     + +P ++PG
Sbjct: 293 SKSVLAGALTLAIMILPTIIRAAEEAILAVPKTYKEASLGLGSTKWNTIVTVILPAALPG 352

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           ++   ++S+        A  +     +V    GI
Sbjct: 353 IITGGVISLGRA-AGETAPIIFTAAVSVGSAIGI 385



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 16/166 (9%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
            G++ +      +   IW      F + +    A +   P+G+         +K   F  
Sbjct: 203 WGFLTDSSIDAHIFGGIWPEIQGTFFLAIG---AMLFAFPLGVVAAIYFTEYAKDGVFTS 259

Query: 424 LLAA-------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----G 471
           +L +        P+ V F L         LN +   S+L    T   ++   I       
Sbjct: 260 MLRSANSTLAGVPSIV-FGLFGLAFFINTLNVSESKSVLAGALTLAIMILPTIIRAAEEA 318

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             A P  +KE +     T W     +ILP   P  +TG + + G A
Sbjct: 319 ILAVPKTYKEASLGLGSTKWNTIVTVILPAALPGIITGGVISLGRA 364


>gi|229828907|ref|ZP_04454976.1| hypothetical protein GCWU000342_00992 [Shuttleworthia satelles DSM
           14600]
 gi|229792070|gb|EEP28184.1| hypothetical protein GCWU000342_00992 [Shuttleworthia satelles DSM
           14600]
          Length = 221

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 5/171 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+  +IA II  P+GI +   P   +  +    L+   P+     L +  +        +
Sbjct: 27  VLAALIAFIIAFPLGILVSKSPLGRALAEHLFGLIRIVPSLAILMLALPFLGIGVKTALV 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L  L I      IL N  +G +A P    E A+   ++  + ++ + LP  FPY   G 
Sbjct: 87  ALVALAI----PPILVNTSSGINAVPAATIEAATGMGMSPRQVFQEVTLPLAFPYIFAGF 142

Query: 511 ITA-CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            TA      + ++ + +   G   +  TGLG    +    G      L ++
Sbjct: 143 RTAFVEVIASTTLAAYIGGGGFGKIIVTGLGLLRTDYLLIGGISVAALSLV 193



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + A +I+ +  F    L +KS     +   +  +++ +P L  L   + +          
Sbjct: 27  VLAALIAFIIAFPLGILVSKSPLGRALAEHLFGLIRIVPSLAILMLALPFLGIGV----- 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  +    +  +P    E +    +S  Q F  + +P + P +
Sbjct: 82  ---KTALVALVALAIPPILVNTSSGINAVPAATIEAATGMGMSPRQVFQEVTLPLAFPYI 138

Query: 193 VWNMMMSM 200
                 + 
Sbjct: 139 FAGFRTAF 146


>gi|229495415|ref|ZP_04389150.1| ABC transporter, permease protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317858|gb|EEN83756.1| ABC transporter, permease protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 252

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 79/239 (33%), Gaps = 22/239 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +     + ++  + + + W ++  ++          V           +   + AS+  I
Sbjct: 6   LFARLGYILLGALLLHLLWATLSLVMQKALLPTPWAVYTHMPTAWQEGMAGHLTASLGRI 65

Query: 403 PVG------------IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            VG            + +    H       F       P     P+V+            
Sbjct: 66  GVGLALALLIALIIALAMHRYRHFGKVFNAFIYFSYPIPKLALLPIVMLLGGLGEGTK-- 123

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++    + ++ ++    +A P D   V  S   +     R+++LP + P  ++  
Sbjct: 124 --IIMILLIVLFQLIVSLRDALAAIPKDNYIVMHSLGASTPAMLRHLLLPALVPALLSAL 181

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A G A +   V+E       +  + G+G YI  +  +  + ++  G+  +      L
Sbjct: 182 RIAIGTAVSVLFVTE------TYGTSRGMGYYIVNAWMRVDYLDMYAGIAFLGATGFLL 234



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +  + + +  R+   + ++LL   + A    + R  G V    +     IP L  L   
Sbjct: 53  GMAGHLTASLGRIGVGLALALLIALIIALAMHRYRHFGKVFNAFIYFSYPIPKLALLPIV 112

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++        K        I  I    ++ +  S+  +L  IP+D   V  S   S    
Sbjct: 113 MLLGGLGEGTK--------IIMILLIVLFQLIVSLRDALAAIPKDNYIVMHSLGASTPAM 164

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             +L +P  +P L+  + +++        A  ++ V +T     G+G YI  A    D L
Sbjct: 165 LRHLLLPALVPALLSALRIAIG------TAVSVLFVTETYGTSRGMGYYIVNAWMRVDYL 218

Query: 240 AILYAMLTMLGVIFLY 255
            +   +  +    FL 
Sbjct: 219 DMYAGIAFLGATGFLL 234


>gi|163735719|ref|ZP_02143149.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
 gi|161390972|gb|EDQ15311.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
          Length = 510

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 72/548 (13%), Positives = 164/548 (29%), Gaps = 67/548 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +A ++++G+  +      +  +    V I+  I  ++  L +  S TT       +   L
Sbjct: 8   IAALVLLGLWEMAAQVFADNLLFVGPVGIISHIWANLGLLGRATSTTTQNAALGFIWGNL 67

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A++     R   V+     ++  +P++       V      PG V    LAA+  
Sbjct: 68  AAGIMASVVIVFPRAERVISSAALVIFCLPLVATGPILRVI---SGPGDVPQIALAALAV 124

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +T+       ++   L  +P +  ++   +          +    S+P L   + ++  
Sbjct: 125 YYTT-----FLALRVGLRAMPANWSDLMSVYGRGAITSLVTIRARASLPYLFVGLQIAAP 179

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +         ++G+      G+G     A++  D+ A     +    +  L   L+ R
Sbjct: 180 AAFL------GAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAIISAAMAMLLYALVGR 233

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321
            +  W   +  +      P  S          +   I          L   +      L 
Sbjct: 234 -LGRWLVGYAPDIILS--PPRS-----MGHKRWRGIIETLGAAVLLILFWQITMDLADLN 285

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
                 P + L    +   +                                     ++ 
Sbjct: 286 RFFAKRPADVLSYLRSDADARA----------------------------------TLLS 311

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
               T    +   I   ++   + + +   P  S  + P A  L A P     PL+V  +
Sbjct: 312 ALAQTTAATIPGYIAGLVLGAALAMAVILLPKASGVVLPVAVALRAIPIITTAPLIVLAL 371

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               +     +++++ F          + G    P    ++  S+            +P 
Sbjct: 372 GRGAVGTIAVIAIMIFF----PTFVACLQGLRQTPRQVTDLFRSYGTGPITVLCLAQIPT 427

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + P +   A  A   A  A   +E    G       G+G  +A ++   ++  +   +L 
Sbjct: 428 MLPAFFAAAKMAVPAAILAVTTTEWLVTGK------GIGLLVALTSTTSNYNMLWSCILA 481

Query: 562 MCCFVLAL 569
                + +
Sbjct: 482 TTLLAVGM 489



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 94/260 (36%), Gaps = 21/260 (8%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPITLDV-HSL 61
           P  +  + +  I + L   +++ +   +   + +        P D++  +    D   +L
Sbjct: 250 PRSMGHKRWRGIIETLGAAVLLILFWQITMDLADLNRFFAKRPADVLSYLRSDADARATL 309

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
               ++TT   +   +  L+     A       +   V++P+   +++IPI+      V+
Sbjct: 310 LSALAQTTAATIPGYIAGLVLGAALAMAVILLPKASGVVLPVAVALRAIPIITTAPLIVL 369

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                  G +    +   F  F + +        Q L   PR + ++ RS+         
Sbjct: 370 ALGRGAVGTIAVIAIMIFFPTFVACL--------QGLRQTPRQVTDLFRSYGTGPITVLC 421

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
              +P  +P       M++      V  +E +V G       GIG  +AL     +   +
Sbjct: 422 LAQIPTMLPAFFAAAKMAVPAAILAVTTTEWLVTGK------GIGLLVALTSTTSNYNML 475

Query: 242 LYAML-TMLGVIFLYDQLLF 260
              +L T L  + +Y  +++
Sbjct: 476 WSCILATTLLAVGMYAVVVW 495


>gi|326938490|gb|AEA14386.1| phosphate ABC transporter permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 303

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 87  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 146

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 147 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 206

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 207 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 266

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 267 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 303



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 77  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 134

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 135 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 194

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 195 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 254

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 255 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 288


>gi|160934478|ref|ZP_02081864.1| hypothetical protein CLOLEP_03350 [Clostridium leptum DSM 753]
 gi|156865931|gb|EDO59303.1| hypothetical protein CLOLEP_03350 [Clostridium leptum DSM 753]
          Length = 277

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 16/212 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGF-LTF 118
           Q    +T+  L ++ ISL+F    A + A+ R   +   +LV  + +++ +P++ F + F
Sbjct: 66  QALINSTITTLVSLAISLVFGITCAYILARVRFRLKGRKILVYWVLLVRVMPLVSFAIPF 125

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++        +I    A +F      +W +         ++P +LEE ++    + W+
Sbjct: 126 YIMFTELGILATLIPVIAACVFINIPLTIWFII----SFFRDLPTELEESAKLDGATEWK 181

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P  +PG+    M+S    W     S M V       +P     + LA    D 
Sbjct: 182 LFVRIVLPLVLPGIAAVAMLSFVYAWNEYTYSVMFVQTPQHYTVP-----LKLATINMDD 236

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             + Y  +   GVI +    +F   ++++ K+
Sbjct: 237 NVMQYGSVAAGGVISIAPMAIF---VIFAQKY 265



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 8/190 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHI---SSKIQPFAQLLAAFPANVF-FPLVVSCV 441
           +    +V + I+ +  I     +            +  +  L+   P   F  P  +   
Sbjct: 71  STITTLVSLAISLVFGITCAYILARVRFRLKGRKILVYWVLLVRVMPLVSFAIPFYIMFT 130

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               L   + +    +F      ++ +I+     P + +E A     T W+ +  I+LP 
Sbjct: 131 ELGILATLIPVIAACVFINIPLTIWFIISFFRDLPTELEESAKLDGATEWKLFVRIVLPL 190

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG--- 558
           + P     A+ +   AWN    S +      H       A I        +  V  G   
Sbjct: 191 VLPGIAAVAMLSFVYAWNEYTYSVMFVQTPQHYTVPLKLATINMDDNVMQYGSVAAGGVI 250

Query: 559 -VLIMCCFVL 567
            +  M  FV+
Sbjct: 251 SIAPMAIFVI 260


>gi|306835464|ref|ZP_07468481.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Corynebacterium
           accolens ATCC 49726]
 gi|304568630|gb|EFM44178.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Corynebacterium
           accolens ATCC 49726]
          Length = 250

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  + +  ++ + + G        ++ DI   TL + S+        + ++ + ++ +
Sbjct: 11  DRLLIIGIPILVVLTVGGWLIWHATAELDDIEERTLQISSVLTMTREHLVLVVISALLVI 70

Query: 81  LFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                   +  +  ++ +  ++  I +I Q+ P++G +    ++     P  ++G    A
Sbjct: 71  ATAVPLGIVLTRKSTKFMAPIITSIANIGQAAPVVGVIVLLAIWLGFGEPVAILGLWFYA 130

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +          ++   L  + + L E +    +S  Q    + +P ++P ++  +  
Sbjct: 131 FLPVLA--------NVIAGLRGVDKQLVEAAYGLSMSPLQVLTKVELPMALPVIMTGIRT 182

Query: 199 SM 200
           S+
Sbjct: 183 SL 184



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 3/186 (1%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++      VV  V   + W +   + +       +  V+ +    +  VV+  ++     
Sbjct: 14  LIIGIPILVVLTVGGWLIWHATAELDDIEERTLQISSVLTMTREHLVLVVISALLVIATA 73

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI        +  + P    +A          V+  ++ +         L + F   
Sbjct: 74  VPLGIV--LTRKSTKFMAPIITSIANIGQAAPVVGVIVLLAIWLGFGEPVAILGLWFYAF 131

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +L NVIAG         E A    ++  +    + LP   P  +TG  T+      A 
Sbjct: 132 LPVLANVIAGLRGVDKQLVEAAYGLSMSPLQVLTKVELPMALPVIMTGIRTSLVLLVGAG 191

Query: 522 IVSEVA 527
             +   
Sbjct: 192 AFATFI 197


>gi|261208668|ref|ZP_05923105.1| phosphate ABC transporter [Enterococcus faecium TC 6]
 gi|289566074|ref|ZP_06446510.1| phosphate ABC transporter, permease PstC [Enterococcus faecium
           D344SRF]
 gi|260077170|gb|EEW64890.1| phosphate ABC transporter [Enterococcus faecium TC 6]
 gi|289162096|gb|EFD09960.1| phosphate ABC transporter, permease PstC [Enterococcus faecium
           D344SRF]
          Length = 306

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
                +S +    +A  AA        +    +L P+++++  IP + +    L+  V +
Sbjct: 90  FIVTFLSAIVATPFAIGAAVFMTEISPKNGTKILQPVIELLVGIPSVVYGFIGLSVIVPF 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  + 
Sbjct: 150 VRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGATRWQTIYK 208

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 209 VVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYIL 465
             +QP  +LL   P+ V+         P V S      + +    ++  +MI  T   + 
Sbjct: 121 KILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VT 177

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              +    A P  ++E + +   T W+    ++L    P  +T  +     A+  ++  +
Sbjct: 178 TMTVDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQ 237

Query: 526 VASWGHIHLRTTGL 539
           +   G+  L  TGL
Sbjct: 238 MV-IGNAALMPTGL 250


>gi|229821055|ref|YP_002882581.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229566968|gb|ACQ80819.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 252

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 65/181 (35%), Gaps = 8/181 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
             +  ++    +T    +V +++ +++     +       +   + P   +LA  P    
Sbjct: 48  AYLPVLVSATVVTGVNALVGLVVGTVLGAAFAVAASTWRALDELVAPLVAVLAVIPIVAL 107

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P++ +            ++ + ++     +    + G        +++  ++  T  + 
Sbjct: 108 APVLYTMFGAGEQTARQVVASVAVYV---PVFVTTLRGLRQTTPVQRDLMRAYAATRRQV 164

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P+  TG   A   A  +++V+E            GLG+YI  S  +  + 
Sbjct: 165 MRAVRLPAAVPFLATGVRIASSLAVISALVAEYFGGPR-----GGLGSYITSSAAQSDYA 219

Query: 554 E 554
            
Sbjct: 220 R 220



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 14/201 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI+  +   L V  L      T +  L  +V+  +    +A  A+  R L  ++ 
Sbjct: 36  LPSPADILGEITAYLPV--LVSATVVTGVNALVGLVVGTVLGAAFAVAASTWRALDELVA 93

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P++ ++  IPI+         F              A++         +  +  + L   
Sbjct: 94  PLVAVLAVIPIVALAPVLYTMFGAGEQTARQVVASVAVYV-------PVFVTTLRGLRQT 146

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                ++ R++  +  Q    + +P ++P L   + ++ S      + +E         P
Sbjct: 147 TPVQRDLMRAYAATRRQVMRAVRLPAAVPFLATGVRIASSLAVISALVAEYFGG-----P 201

Query: 222 LPGIGSYIALAIKEQDLLAIL 242
             G+GSYI  +  + D     
Sbjct: 202 RGGLGSYITSSAAQSDYARAW 222


>gi|254438261|ref|ZP_05051755.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198253707|gb|EDY78021.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 279

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 83/261 (31%), Gaps = 35/261 (13%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN--------------------HFT 372
           +L +  R           ++ GV +   WQ +  ++                        
Sbjct: 19  RLANGPRSDNRAIRLLIPIIFGVTVIAMWQVLVTMLGISPIILPPPSSIAVRFASEIPIL 78

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           + D    I  G +T        +I  I    V +       ++  I P    +AA P   
Sbjct: 79  WADFEQTILKGAMT------GYVIGMIAAFAVALLADRSEFLTKGILPVGAFMAALPIVG 132

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ V  +     +    + +++ F     IL N +AG        +++  ++    W 
Sbjct: 133 TAPIFVKWLGSDWQSKAAVVGVMVFF----PILVNTVAGLKDTSAMQRDLMRTYGAGYWA 188

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P+   G   A   A   +IV+E          T G+G  I+ S  + + 
Sbjct: 189 TLFKLRLPAALPFMFNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLAL 243

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V   +++      A    +
Sbjct: 244 DMVWAEIVVAALAGSAFYGLM 264



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 93/248 (37%), Gaps = 16/248 (6%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R + P IF +    +   ++ +L         P  I   V    ++  L     +T L+ 
Sbjct: 32  RLLIPIIFGVTVIAMWQVLVTMLGISPIILPPPSSIA--VRFASEIPILWADFEQTILKG 89

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++  VI ++  F  A LA +S  L   ++P+   M ++PI+G     V +  + +  K 
Sbjct: 90  AMTGYVIGMIAAFAVALLADRSEFLTKGILPVGAFMAALPIVGTAPIFVKWLGSDWQSKA 149

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F         +  +    L +      ++ R++    W   + L +P ++P 
Sbjct: 150 AVVGVMVFF--------PILVNTVAGLKDTSAMQRDLMRTYGAGYWATLFKLRLPAALPF 201

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P  G+G  I+ ++ +  L  +   ++     
Sbjct: 202 MFNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALA 256

Query: 252 IFLYDQLL 259
              +  L+
Sbjct: 257 GSAFYGLM 264


>gi|312136498|ref|YP_004003835.1| phosphate abc transporter membrane protein 1, phot family
           [Methanothermus fervidus DSM 2088]
 gi|311224217|gb|ADP77073.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Methanothermus fervidus DSM 2088]
          Length = 291

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 7/148 (4%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIG 133
            S+L     A LA     +  +L P+++ +  IP + +    L   V +      G   G
Sbjct: 84  FSVLCAIFIAELA--PSTMRKILKPVIETLAGIPSVVYGFFGLILLVPFIRTHLGGTGFG 141

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              A++          ++ S + ++ ++P + +E S +   + WQ    + +P + PG+V
Sbjct: 142 LFTASLILTIMIMPTIISIS-HDAIRSVPLEYKEASLALGATHWQTIKNVILPAAFPGIV 200

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +++ M+      +A  M+      IP
Sbjct: 201 VGIILGMARAIGETLAVIMVAGNVPQIP 228



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 52/132 (39%), Gaps = 7/132 (5%)

Query: 413 HISSKIQPFAQLLAAFPANVF----FPLVVSCVS--YYHLNPNLWLSLLMIFGTQWYILF 466
            +   ++P  + LA  P+ V+      L+V  +          L+ + L++       + 
Sbjct: 99  TMRKILKPVIETLAGIPSVVYGFFGLILLVPFIRTHLGGTGFGLFTASLILTIMIMPTII 158

Query: 467 NVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
           ++      + P ++KE + +   T W+  + +ILP  FP  V G I     A   ++   
Sbjct: 159 SISHDAIRSVPLEYKEASLALGATHWQTIKNVILPAAFPGIVVGIILGMARAIGETLAVI 218

Query: 526 VASWGHIHLRTT 537
           + +     +  +
Sbjct: 219 MVAGNVPQIPHS 230


>gi|256784416|ref|ZP_05522847.1| ABC transporter permease protein [Streptomyces lividans TK24]
 gi|289768295|ref|ZP_06527673.1| ABC transporter permease [Streptomyces lividans TK24]
 gi|289698494|gb|EFD65923.1| ABC transporter permease [Streptomyces lividans TK24]
          Length = 221

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + +A+ I +P G+  G      + +   A    A P+     L+   V    L   +
Sbjct: 35  LMALGLAAAIGLPAGLLTGHTGRGGNAVAFVATAARALPSFGLLVLIAVVVGIGLLPVMV 94

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        IL        +      + A    +        + LP   P  ++G 
Sbjct: 95  PLVVL----AVPPILVTTYEAVRSVDPSPVDAARGMGMHESGILFRVELPVALPLVLSGL 150

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +A     + + ++   S G       G+G YI +   +  + +VV G  ++    L   
Sbjct: 151 RSAAIQVVSTATIAAYVSLG-------GIGRYIIDGLYQRDYEKVVGGATLVAVLALVTL 203

Query: 571 RFLW 574
              W
Sbjct: 204 ALFW 207



 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +P          L A+ ++         L   + R G  +  +    +++P  G L   
Sbjct: 22  GIPTRLLEHVQYTLMALGLAAAIGLPAGLLTGHTGRGGNAVAFVATAARALPSFGLLVLI 81

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            V              L  +  +    V  +  + Y+++ ++     + +R   +     
Sbjct: 82  AVVVGIGL--------LPVMVPLVVLAVPPILVTTYEAVRSVDPSPVDAARGMGMHESGI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P ++P ++  +  +          +  + +G       GIG YI   + ++D  
Sbjct: 134 LFRVELPVALPLVLSGLRSAAIQVVSTATIAAYVSLG-------GIGRYIIDGLYQRDYE 186

Query: 240 AILYAMLTMLGVIFLYDQLLF 260
            ++     +  +  +   L +
Sbjct: 187 KVVGGATLVAVLALVTLALFW 207


>gi|84514675|ref|ZP_01002039.1| ABC transporter, permease protein [Loktanella vestfoldensis SKA53]
 gi|84511726|gb|EAQ08179.1| ABC transporter, permease protein [Loktanella vestfoldensis SKA53]
          Length = 306

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 4/167 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     +R + M ++P     Q+IPIL  
Sbjct: 96  TSRQSLVYHGWVTLSATLVGFAIGTTLGILLAVGIVHNRAMDMSVMPWAIASQTIPILAL 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V         ++   + + +  F    + +   M + L +      ++ R++  S
Sbjct: 156 APMIIVMMGQFGIQGLLPKAVISAYLSF----FPVVVGMVKGLRSPDAMQMDLLRTYYAS 211

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             Q FW L +P S+P L  +  + +S      + +E+          
Sbjct: 212 SSQGFWKLRLPASVPYLFASFKIGISAALVGAIVAELPTGARAGFGA 258



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 70/174 (40%), Gaps = 5/174 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   +V   I + + I + + I     +   + P+A      P     P++
Sbjct: 100 SLVYHGWVTLSATLVGFAIGTTLGILLAVGIVHNRAMDMSVMPWAIASQTIPILALAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +  + +   L  +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVMMGQFGIQGLLPKAVISAYLSFFPVVVGMVKGLRSPDAMQMDLLRTYYASSSQGFWKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
            LP   PY           A   +IV+E+ +         G GA +    + G+
Sbjct: 220 RLPASVPYLFASFKIGISAALVGAIVAELPTGAR-----AGFGARMLVGDQYGN 268


>gi|301312078|ref|ZP_07218000.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           20_3]
 gi|300830180|gb|EFK60828.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp.
           20_3]
          Length = 395

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+ +SL F    A   A+  + +   +L P+++++  IP + +    L   V      
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 362

Query: 241 ILYAMLTMLGVIFLYDQL 258
             Y  L MLG +     L
Sbjct: 363 AHYQALFMLGAVLFLITL 380



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I ++    + V I++         + ++P  +LLA  P+ V+         PL+   
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +           S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 339


>gi|256840976|ref|ZP_05546483.1| phosphate ABC transporter, permease PstC [Parabacteroides sp. D13]
 gi|256736819|gb|EEU50146.1| phosphate ABC transporter, permease PstC [Parabacteroides sp. D13]
          Length = 395

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+ +SL F    A   A+  + +   +L P+++++  IP + +    L   V      
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 362

Query: 241 ILYAMLTMLGVIFLYDQL 258
             Y  L MLG +     L
Sbjct: 363 AHYQALFMLGAVLFLITL 380



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I ++    + V I++         + ++P  +LLA  P+ V+         PL+   
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +           S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 339


>gi|325569754|ref|ZP_08145778.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157059|gb|EGC69225.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
          Length = 306

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    L       +S +    +A  AA        R    +L P+++++  IP + +   
Sbjct: 82  ALPMILGSFFVTFLSAIVATPFAIGAAVFMVEISPRNGEKILQPVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V    +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 142 GLSVVVPAVRSVFGGTGFGI-LAGTFVLFIMILPTVTTMTVDALRAVPRHYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 201 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 64/173 (36%), Gaps = 9/173 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPH-ISSKIQPFAQLLAAFPAN 431
           Q ++  + +   + F   +  I+A+   I   +++    P      +QP  +LL   P+ 
Sbjct: 77  QPLVGALPMILGSFFVTFLSAIVATPFAIGAAVFMVEISPRNGEKILQPVIELLVGIPSV 136

Query: 432 VFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVAS 484
           V+  + +S V       +      +     ++F      +    +    A P  ++E + 
Sbjct: 137 VYGFIGLSVVVPAVRSVFGGTGFGILAGTFVLFIMILPTVTTMTVDALRAVPRHYREASL 196

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +   T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 197 ALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAALMPTS 249


>gi|227518946|ref|ZP_03948995.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227553566|ref|ZP_03983615.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229545630|ref|ZP_04434355.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229549821|ref|ZP_04438546.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383447|ref|ZP_06629360.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis R712]
 gi|293388899|ref|ZP_06633384.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis S613]
 gi|307269570|ref|ZP_07550909.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4248]
 gi|307273032|ref|ZP_07554278.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0855]
 gi|307275781|ref|ZP_07556920.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2134]
 gi|307277878|ref|ZP_07558962.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0860]
 gi|307289297|ref|ZP_07569253.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0109]
 gi|307291804|ref|ZP_07571675.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0411]
 gi|312901837|ref|ZP_07761102.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0470]
 gi|312903507|ref|ZP_07762687.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0635]
 gi|312907724|ref|ZP_07766715.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 512]
 gi|312910342|ref|ZP_07769189.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 516]
 gi|312951688|ref|ZP_07770583.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0102]
 gi|227073635|gb|EEI11598.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177296|gb|EEI58268.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229305090|gb|EEN71086.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229309198|gb|EEN75185.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079238|gb|EFE16602.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis R712]
 gi|291081680|gb|EFE18643.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis S613]
 gi|306497070|gb|EFM66616.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0411]
 gi|306500006|gb|EFM69367.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0109]
 gi|306505275|gb|EFM74461.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0860]
 gi|306507473|gb|EFM76604.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2134]
 gi|306510017|gb|EFM79041.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0855]
 gi|306514190|gb|EFM82766.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4248]
 gi|310626752|gb|EFQ10035.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 512]
 gi|310630405|gb|EFQ13688.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0102]
 gi|310633383|gb|EFQ16666.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0635]
 gi|311289615|gb|EFQ68171.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis DAPTO 516]
 gi|311291030|gb|EFQ69586.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0470]
 gi|315027914|gb|EFT39846.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2137]
 gi|315031982|gb|EFT43914.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0017]
 gi|315037168|gb|EFT49100.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0027]
 gi|315144997|gb|EFT89013.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX2141]
 gi|315147454|gb|EFT91470.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX4244]
 gi|315149835|gb|EFT93851.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0012]
 gi|315152291|gb|EFT96307.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0031]
 gi|315156092|gb|EFU00109.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0043]
 gi|315158267|gb|EFU02284.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0312]
 gi|315162426|gb|EFU06443.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0645]
 gi|315163911|gb|EFU07928.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1302]
 gi|315167281|gb|EFU11298.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1341]
 gi|315169649|gb|EFU13666.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1342]
 gi|315174816|gb|EFU18833.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1346]
 gi|315576033|gb|EFU88224.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0309B]
 gi|315577797|gb|EFU89988.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0630]
 gi|315580608|gb|EFU92799.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX0309A]
 gi|327535322|gb|AEA94156.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 313

 Score = 66.9 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A            +S +    +A  AA        ++    L P+++++  IP + +   
Sbjct: 89  ALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVYGFI 148

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 149 GLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGA 207

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 208 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 249



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 64/174 (36%), Gaps = 15/174 (8%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +     +  I+A+   I   +++        +  +QP  +LL   P+ V+
Sbjct: 86  MVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVY 145

Query: 434 --------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                    P V S      + +    ++  +MI  T   +    +    A P  ++E +
Sbjct: 146 GFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VTTMTVDALKAVPRHYREAS 202

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 203 LALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAAVMPTS 256


>gi|255014854|ref|ZP_05286980.1| putative ABC transporter permease protein [Bacteroides sp. 2_1_7]
          Length = 387

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+ +SL F    A   A+  + +   +L PI++++  IP + +    L   V      
Sbjct: 175 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 234

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 235 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 294

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 295 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 354

Query: 241 ILYAMLTMLGVIFLYDQL 258
             Y  L MLG +     L
Sbjct: 355 AHYQALFMLGAVLFLITL 372



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I ++    + V I++         + ++P  +LLA  P+ V+         PL+   
Sbjct: 175 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQKT 234

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +           S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 235 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 294

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 295 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 331


>gi|168213766|ref|ZP_02639391.1| ABC transporter, permease protein [Clostridium perfringens CPE str.
           F4969]
 gi|170714710|gb|EDT26892.1| ABC transporter, permease protein [Clostridium perfringens CPE str.
           F4969]
          Length = 251

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 87/221 (39%), Gaps = 14/221 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  + ++++        P      +   +  +   +    T  R   +  ++L+ 
Sbjct: 17  VILFILWQLASMIIGSEVILPSPYLTFKGLIEVIKSNDFFKIIISTLGRTFISFTLALVI 76

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
                   A ++ +   +VPIL++M+S+P +GF+   +++        ++G  ++  F I
Sbjct: 77  ALFLGVFGAFNKYVYNFMVPILNVMRSLPTIGFIILALIWLSQGIAPILVGFVMS--FPI 134

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F   +         ++ NI +++ E+++ + +        + +P     +   M+ + S 
Sbjct: 135 FYDAI-------IGAILNIDKNILEMAKVYEIGIGNLIKNIYLPSISFAICRIMVSTFSL 187

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               VV  E+I       P  GIG+ + +     +   +  
Sbjct: 188 TMKLVVGGEVIG-----QPKYGIGTALFVEKNYLNTNMVFA 223



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 12/181 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              +   T+ R  +   +A +I + +G++  F  ++ + + P   ++ + P   F  L +
Sbjct: 55  FFKIIISTLGRTFISFTLALVIALFLGVFGAFNKYVYNFMVPILNVMRSLPTIGFIILAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYI 497
             +S           +L+ F   + I ++ I GA      +  E+A  + I      + I
Sbjct: 115 IWLSQG------IAPILVGFVMSFPIFYDAIIGAILNIDKNILEMAKVYEIGIGNLIKNI 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP I        ++         +  EV           G+G  +       +   V  
Sbjct: 169 YLPSISFAICRIMVSTFSLTMKLVVGGEVIGQPKY-----GIGTALFVEKNYLNTNMVFA 223

Query: 558 G 558
            
Sbjct: 224 W 224


>gi|90418405|ref|ZP_01226317.1| permease protein, ABC-type nitrate/sulfonate/taurine/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90338077|gb|EAS51728.1| permease protein, ABC-type nitrate/sulfonate/taurine/bicarbonate
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 290

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 102/262 (38%), Gaps = 21/262 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P +F +    L   ++  L   I     P DI   +  +L +  L     +T L+ ++
Sbjct: 43  LIPIVFGVSLLFLWEFVVRALQVPIVLLPAPSDIGVRIASSLPI--LWVDFVQTFLKAVI 100

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  VI     FV A L  +S  L   L+P+ +++ ++PI+G     V++F   +P K   
Sbjct: 101 AGYVIGCASGFVVAVLVDRSSFLKRGLLPVGNLVSALPIVGVAPIMVMWFGFDWPSKAA- 159

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                   +     + M  +    L        ++ R++    WQ    L +P +MP + 
Sbjct: 160 -------VVVVMTFFPMLVNTVAGLSAAGAMERDLMRTYAAGPWQSLLKLRLPAAMPFIF 212

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P+ G+G  I+  I   +   +++A + +  +  
Sbjct: 213 NALKINSTLALIGAIVAEFFGT-----PIVGMGFRISAEIGRMN-TDMVWAEIAVAALAG 266

Query: 254 LYD----QLLFRPMIVWSNKFR 271
                   ++ R    W   +R
Sbjct: 267 SLTYGILSVIERITTFWHPSYR 288



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 86/258 (33%), Gaps = 23/258 (8%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN------------HFT 372
           +    +   +    R   +       +V GV++   W+ +   +                
Sbjct: 20  WRLTVSLAAIEPRGRAGRVALQVLIPIVFGVSLLFLWEFVVRALQVPIVLLPAPSDIGVR 79

Query: 373 YQDVLYVIWLGCITMF--RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
               L ++W+  +  F   V+   +I       V + +     +   + P   L++A P 
Sbjct: 80  IASSLPILWVDFVQTFLKAVIAGYVIGCASGFVVAVLVDRSSFLKRGLLPVGNLVSALPI 139

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
               P++V    +   +     + +++  T + +L N +AG SA     +++  ++    
Sbjct: 140 VGVAPIMVMWFGFDWPSK----AAVVVVMTFFPMLVNTVAGLSAAGAMERDLMRTYAAGP 195

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    + LP   P+           A   +IV+E      +     G+G  I+    + 
Sbjct: 196 WQSLLKLRLPAAMPFIFNALKINSTLALIGAIVAEFFGTPIV-----GMGFRISAEIGRM 250

Query: 551 SFPEVVLGVLIMCCFVLA 568
           +   V   + +       
Sbjct: 251 NTDMVWAEIAVAALAGSL 268


>gi|330992832|ref|ZP_08316775.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329759986|gb|EGG76487.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 255

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 72/202 (35%), Gaps = 6/202 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +    + +   ++     T+   +V ++++ ++   + + +     +     P+  +L  
Sbjct: 40  IAASLHANWPMLLHALGSTLQVTLVSLLVSVVLGTAIAVVLVQHKLLQVSFMPYVIILQV 99

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     PL++  V        + L L       + ++ N + G  A     +       
Sbjct: 100 TPIAAVAPLIIVLVKTTG----VALVLCATLIAIFPVISNTLIGLGAVDPGLEAYFRMHK 155

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T  +    + +P   P ++ G   A G A   ++V+E  +       + GL   I +S 
Sbjct: 156 ATRMQTLLRLRIPSALPMFMAGVRIASGLALVGAVVAEFVAG--TGGNSAGLAYEILQSG 213

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            +   P +   + ++    L L
Sbjct: 214 FQMDIPRMFAALFLITVTGLVL 235



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 10/211 (4%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P        +  +   L      T    L ++++S++     A +  + + L +  +P +
Sbjct: 35  PAPSDIAASLHANWPMLLHALGSTLQVTLVSLLVSVVLGTAIAVVLVQHKLLQVSFMPYV 94

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I+Q  PI       +V         V+ A L AIF + +        +    L  +   
Sbjct: 95  IILQVTPIAAVAPLIIVLVKTTGVALVLCATLIAIFPVIS--------NTLIGLGAVDPG 146

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           LE   R  + +  Q    L +P ++P  +  + ++        V +E +          G
Sbjct: 147 LEAYFRMHKATRMQTLLRLRIPSALPMFMAGVRIASGLALVGAVVAEFVAGTGGNSA--G 204

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +   I  +  + D+  +  A+  +     + 
Sbjct: 205 LAYEILQSGFQMDIPRMFAALFLITVTGLVL 235


>gi|325475157|gb|EGC78342.1| cysTW family ABC transporter [Treponema denticola F0402]
          Length = 243

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 92/241 (38%), Gaps = 18/241 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ---YASRTTLRMLS 74
           N F +      + +      G++   +   I +I+     +   P+   +   + +R+  
Sbjct: 9   NKFKIGGAFFCLILWETFAQGLKAPLIIPSIKEILSALFVIIKTPETYVFILSSLIRIFI 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + I     F+    +  ++ +   L    +I++S P +  L   +++F          +
Sbjct: 69  TLAIDSFIAFLLGIASGLNKNVEDFLSAPENILKSSPTISVLLLALIWF---------KS 119

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +  IF      +  +  ++   + NI + L E+S  F +   ++   L +P   P L  
Sbjct: 120 NMTPIFVTSLIVLPLLYRNIVDGVKNIDKGLIEMSYDFNVPFGKRLKSLYLPCIRPFLKN 179

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIF 253
             ++S       V+ +E++       P  GIGS    A  + +  +I  +  + +L   F
Sbjct: 180 GYILSTGFAVKVVIMAEVLS-----QPKYGIGSAFQTAKIQIETASIFAWTGIAVLLAAF 234

Query: 254 L 254
           L
Sbjct: 235 L 235



 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R+ + + I S I   +GI  G   ++   +     +L + P      L +     
Sbjct: 60  LSSLIRIFITLAIDSFIAFLLGIASGLNKNVEDFLSAPENILKSSPTISVLLLALIWF-- 117

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                N+    +        +  N++ G         E++  F++   +  + + LP I 
Sbjct: 118 ---KSNMTPIFVTSLIVLPLLYRNIVDGVKNIDKGLIEMSYDFNVPFGKRLKSLYLPCIR 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+   G I + G A    I++EV S         G+G+    +  +     +     I  
Sbjct: 175 PFLKNGYILSTGFAVKVVIMAEVLSQPKY-----GIGSAFQTAKIQIETASIFAWTGIAV 229

Query: 564 CFVLALNR 571
                L +
Sbjct: 230 LLAAFLQK 237


>gi|297565358|ref|YP_003684330.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
 gi|296849807|gb|ADH62822.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
          Length = 249

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 22  LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+  L +G++ +    G+  T +      +     +  +L   A         A  + L
Sbjct: 13  WLSLGLWVGVLVLFAQQGLWRTVLGWLFPSVQTPIFERQTLFNLALEHLGLTFVAGGLVL 72

Query: 81  LFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                 A   ++S       ++  +  + Q+ P    L   +  F     G        A
Sbjct: 73  GVGLPLAVWVSRSQGEAFRPLVENLAAVGQTFPPPAVLALALPLFGFGAQG--------A 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+F   +  +  +  + L  +P+D+ E +R   LS  ++ + + +P ++P ++  +  
Sbjct: 125 VLALFIYGLLPVVRNTLEGLAGLPQDVLESARGMGLSPRERLFRVELPLALPVILSGIRT 184

Query: 199 SM 200
           S 
Sbjct: 185 SF 186



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 13/186 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQS---IGYIVNHFTYQDVLYVIWLGCITMFRVV 391
               +  ++    W  V+   A    W++     +        +   +  L    +    
Sbjct: 6   APRNKGIWLSLGLWVGVLVLFAQQGLWRTVLGWLFPSVQTPIFERQTLFNLALEHLGLTF 65

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLN 447
           V   +   + +P+ +W+          +P  + LAA    FP      L +    +    
Sbjct: 66  VAGGLVLGVGLPLAVWVSRSQ--GEAFRPLVENLAAVGQTFPPPAVLALALPLFGFGAQG 123

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L L +  +      ++ N + G +  P D  E A    ++       + LP   P  +
Sbjct: 124 AVLALFIYGLL----PVVRNTLEGLAGLPQDVLESARGMGLSPRERLFRVELPLALPVIL 179

Query: 508 TGAITA 513
           +G  T+
Sbjct: 180 SGIRTS 185


>gi|261823745|ref|YP_003261851.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261607758|gb|ACX90244.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 226

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 61/176 (34%), Gaps = 8/176 (4%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           F        + +   +L+   + ++S+P  G +   V+     +   +    L  I  + 
Sbjct: 40  FPVGCYTGHTGKGEALLIGTTNALRSLPSFGLIILLVILLAGYFESDMAFV-LPCIIVLV 98

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +   ++  + ++   + + +    L+  Q  W + +P +MP ++  +    S  
Sbjct: 99  VLALPPVALGVHAGIRSVDPSVHDAANGIGLTPLQVLWQVELPCAMPLILSGIR---SAA 155

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              V  + +       + L G+G  I       D   +    L +  +  + D   
Sbjct: 156 LQIVSTATIAA----YVSLGGLGRLIIDGRAANDFAQMTAGALLVALLALVIDLFF 207



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 10/174 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---SLLMIFG 459
           PVG + G      + +      L + P+     L+V  ++ Y  +   ++    ++++  
Sbjct: 41  PVGCYTGHTGKGEALLIGTTNALRSLPSFGLIILLVILLAGYFESDMAFVLPCIIVLVVL 100

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +   V AG  +      + A+   +T  +    + LP   P  ++G  +A     +
Sbjct: 101 ALPPVALGVHAGIRSVDPSVHDAANGIGLTPLQVLWQVELPCAMPLILSGIRSAALQIVS 160

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++   S G       GLG  I +      F ++  G L++    L ++ F 
Sbjct: 161 TATIAAYVSLG-------GLGRLIIDGRAANDFAQMTAGALLVALLALVIDLFF 207


>gi|83590523|ref|YP_430532.1| binding-protein dependent transport system inner membrane protein
           [Moorella thermoacetica ATCC 39073]
 gi|83573437|gb|ABC19989.1| Binding-protein-dependent transport systems inner membrane
           component [Moorella thermoacetica ATCC 39073]
          Length = 216

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 15/164 (9%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +       L A+ +R+  V++ I   +Q+IP L F  F + +             + A+ 
Sbjct: 38  IIAVPLGILLARHQRVAAVMLGISSTIQTIPSLAFFGFVLPFLGIGI--------VPAMT 89

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +F   +  +  + Y  +  +     E      ++  Q   ++  P + P ++  + +S 
Sbjct: 90  VLFLYSILPILRNTYTGIREVNPAYLEAGIGMGMNRRQLLTWIQFPLAFPVIMSGIRVST 149

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                +   S +I  G       G+G  I   I   D   I+  
Sbjct: 150 VYIISWATLSALIGAG-------GLGDPILAGIHTYDAKLIMAG 186



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 4/134 (2%)

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +II +P+GI +     +++ +   +  +   P+  FF  V+  +        +    ++ 
Sbjct: 37  TIIAVPLGILLARHQRVAAVMLGISSTIQTIPSLAFFGFVLPFLGIG----IVPAMTVLF 92

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +   IL N   G       + E      +   +   +I  P  FP  ++G   +    
Sbjct: 93  LYSILPILRNTYTGIREVNPAYLEAGIGMGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYI 152

Query: 518 WNASIVSEVASWGH 531
            + + +S +   G 
Sbjct: 153 ISWATLSALIGAGG 166


>gi|27467143|ref|NP_763780.1| opuCD protein [Staphylococcus epidermidis ATCC 12228]
 gi|57865706|ref|YP_189903.1| amino acid ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|242243451|ref|ZP_04797896.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
 gi|251811556|ref|ZP_04826029.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282876712|ref|ZP_06285568.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|293367459|ref|ZP_06614117.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314685|gb|AAO03822.1|AE016744_225 opuCD protein [Staphylococcus epidermidis ATCC 12228]
 gi|57636364|gb|AAW53152.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|242233071|gb|EES35383.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
 gi|251804934|gb|EES57591.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281294363|gb|EFA86901.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|291318405|gb|EFE58793.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|319400450|gb|EFV88684.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus epidermidis FRI909]
 gi|329732192|gb|EGG68546.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU144]
 gi|329732721|gb|EGG69069.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU028]
 gi|329735829|gb|EGG72109.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU045]
          Length = 215

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 80/208 (38%), Gaps = 15/208 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           ++   L +      L  +  ++++ L       + A+  +L  V++ I +I+Q++P++  
Sbjct: 15  MNFGYLWELFVNHLLMSVYGVLLACLVGIPLGIIIARFGKLSGVIITIANIIQTVPVIAM 74

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L   ++                 IF +F   +  +  + Y  +  +  ++++  +   ++
Sbjct: 75  LAILMLSMGLGM--------NTVIFTVFLYALLPIIKNTYTGINEVDPNIKDAGKGMGMT 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q    + +P S+  ++  + +++            +V   + I  P +G  +      
Sbjct: 127 RNQVLTMIELPLSLSVIIGGIRIALVVA-------IGVVAVGSFIGAPTLGDIVIRGTNA 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            D    + A    + +I +   +L R +
Sbjct: 180 TDGTLFILAGAIPIVIIVILIDVLLRLL 207



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  +++A ++ IP+GI I     +S  I   A ++   P      +++  +         
Sbjct: 32  VYGVLLACLVGIPLGIIIARFGKLSGVIITIANIIQTVPVIAMLAILMLSMGLGMNT--- 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   +       I+ N   G +    + K+      +T  +    I LP      + G 
Sbjct: 89  -VIFTVFLYALLPIIKNTYTGINEVDPNIKDAGKGMGMTRNQVLTMIELPLSLSVIIGGI 147

Query: 511 ITAC 514
             A 
Sbjct: 148 RIAL 151


>gi|293401075|ref|ZP_06645220.1| spermidine/putrescine ABC transporter,
           spermidine/putrescine-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306101|gb|EFE47345.1| spermidine/putrescine ABC transporter,
           spermidine/putrescine-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 631

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 91/257 (35%), Gaps = 11/257 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
           F  R I   I     F ++  ++         T+     +          ++ +    T 
Sbjct: 6   FSRRLILGLILVFFYFPILYMLVFSFNGSRSLTSFDGFSLQWYEKMFSDRNMMEAIYYTL 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +  + A  IS +   + A   +KS+R   ++  ++  +  +PI+     T V  M  Y  
Sbjct: 66  ITAVIATFISTIVGTITAIGLSKSKR---IVREVVQQINDLPIMNPEIVTAVGLMLFYVS 122

Query: 130 KVI-GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    L  + A        +  S+   L ++  +L E +     +  +  W + VP  
Sbjct: 123 MHMEKGFLTMLLAHIAFCTPYVILSVMPKLRSLDPNLAEAAMDLGATPAKAMWKVIVPQI 182

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           MPG+V   +++ +  +   + S  +           I + +    K  +        L+ 
Sbjct: 183 MPGIVSGALIAFTMSFDDFIISYFVTGNGVKN----ISTLVWTMSKRINPS---INSLST 235

Query: 249 LGVIFLYDQLLFRPMIV 265
           L VI +   LLF  ++ 
Sbjct: 236 LIVIMITITLLFVNLVP 252



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 89/244 (36%), Gaps = 16/244 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN----HFTYQDVLYVIWLGCITMFRVVV 392
           ++R+   L + +F       +  ++     + +       + + ++        ++  ++
Sbjct: 7   SRRLILGLILVFFYFPILYMLVFSFNGSRSLTSFDGFSLQWYEKMFSDRNMMEAIYYTLI 66

Query: 393 LIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAFP---ANVFFPLVVSCVSYYHLN 447
             +IA+ I   VG    IG        ++   Q +   P     +   + +         
Sbjct: 67  TAVIATFISTIVGTITAIGLSKS-KRIVREVVQQINDLPIMNPEIVTAVGLMLFYVSMHM 125

Query: 448 PNLWLSLLMIFGTQ--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +L++L+        Y++ +V+    +   +  E A     T  +    +I+P I P 
Sbjct: 126 EKGFLTMLLAHIAFCTPYVILSVMPKLRSLDPNLAEAAMDLGATPAKAMWKVIVPQIMPG 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+GA+ A   +++  I+S   +   +   +T     +   +++ +     L  LI+   
Sbjct: 186 IVSGALIAFTMSFDDFIISYFVTGNGVKNIST----LVWTMSKRINPSINSLSTLIVIMI 241

Query: 566 VLAL 569
            + L
Sbjct: 242 TITL 245


>gi|239833814|ref|ZP_04682142.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239821877|gb|EEQ93446.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 295

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 63/192 (32%), Gaps = 10/192 (5%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
              +T+    +  +I ++  +  GI +G    ++     + ++  + P  V   + +  +
Sbjct: 94  QIIVTLEETALGFLIGAVGGVICGILLGRNKFLADVFSIYIKIANSIPRVVLGSIFIIAL 153

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +      +++ F        N   G           A     +  +  R +I+P 
Sbjct: 154 GLGMASKVALAVVMVFFVVF----ANAFQGVREADRALIANAQILGASRSQITRTVIVPS 209

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
              + +     + G A   ++V E            G+G  I+ +    +   V   ++I
Sbjct: 210 AMSWILASLHVSFGFALVGAVVGEFLG------AKKGVGLMISTAQGTFNANGVFAAMVI 263

Query: 562 MCCFVLALNRFL 573
           +    L +   +
Sbjct: 264 LAVLALVVEYII 275



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L +    T        +I  +   +   L  +++ L  V    + I  SIP + 
Sbjct: 85  GTSQGPLSEQIIVTLEETALGFLIGAVGGVICGILLGRNKFLADVFSIYIKIANSIPRVV 144

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  ++        KV  A +   F +F         + +Q +    R L   ++    
Sbjct: 145 LGSIFIIALGLGMASKVALAVVMVFFVVFA--------NAFQGVREADRALIANAQILGA 196

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q    + VP +M  ++ ++ +S     F +V +   VVG+ +    G+G  I+ A  
Sbjct: 197 SRSQITRTVIVPSAMSWILASLHVSFG---FALVGA---VVGEFLGAKKGVGLMISTAQG 250

Query: 235 EQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVW 266
             +   +  AM+ +  +  +      L+   ++ W
Sbjct: 251 TFNANGVFAAMVILAVLALVVEYIITLIENHLVKW 285


>gi|213581379|ref|ZP_03363205.1| hypothetical protein SentesTyph_09300 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 173

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 17/186 (9%)

Query: 76  MVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           M  +LL       L ++   +     ++ I ++  ++P L  L   +V            
Sbjct: 1   MFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIG------- 53

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            +  AI A+F + +  +  + Y  LC++P  L E +    ++ WQ+   + +P + P ++
Sbjct: 54  -DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVML 112

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++         A    ++G +       G  I   I   D   ++           
Sbjct: 113 SGIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFAL 165

Query: 254 LYDQLL 259
           + D LL
Sbjct: 166 ILDTLL 171



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 15/183 (8%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNL 450
           +  A ++ IP GI +  RP      +   Q+       P      L +  +         
Sbjct: 1   MFFALLVGIPSGILL-SRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDT---- 55

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +   +   I+ N  AG  + P    E A+   +T W+  R + LP  +P  ++G 
Sbjct: 56  PAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGI 115

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A       + ++ +          +  G  I        FP ++LG      F L L+
Sbjct: 116 RIATAINVGTAPLAFLIG-------ASSYGELIFPGIYLNDFPTLILGATATALFALILD 168

Query: 571 RFL 573
             L
Sbjct: 169 TLL 171


>gi|323160386|gb|EFZ46335.1| taurine transport system permease protein tauC domain protein
           [Escherichia coli E128010]
          Length = 166

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376
             +++ +P +     S   ++ +L ++W      +   +      Q +  ++     Q  
Sbjct: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71

Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +          ++ R+V+ ++ A +I IPVGI +G  P +   + P  +L    P   + 
Sbjct: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           PL+V        +      LL+       +  + +AG  
Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVK 166



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 54/126 (42%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V  + +I+ L     +  + + +    P      +L Q+ + +  R++ A++ +++
Sbjct: 37  VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                      S  +  +L P++++ + +P L +L   V++F      K++   LA    
Sbjct: 97  IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAP 156

Query: 142 IFTSQV 147
           +  S +
Sbjct: 157 VAMSAL 162


>gi|312144108|ref|YP_003995554.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
 gi|311904759|gb|ADQ15200.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
          Length = 206

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 74/195 (37%), Gaps = 17/195 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +    +  ++ I++L       + +++  +     L+   +I Q +P L  +   + +
Sbjct: 17  MIQHLRLVGFSVFIAILIALPTGIILSRNFIKNYSEKLIFFFNIAQGLPSLAVIALVLPF 76

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +        + A+ A+    +  +  +    L NI  DL E ++   ++ ++  + 
Sbjct: 77  LGIGF--------VPAVTALIIYALLPIIRNTIAGLNNIETDLIEAAQGMGMTPFEILYK 128

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  +        V S +I  G       G+G  I   +   D   IL
Sbjct: 129 IELPLALPVIIAGIQTAAVVTVGTAVVSNLIGAG-------GLGQMIFTGLAMFDRRKIL 181

Query: 243 YAMLTMLGVIFLYDQ 257
              L    +  + D+
Sbjct: 182 LGSLLAAFIAIIIDR 196



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 13/184 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           V   + IA +I +P GI +      + S K+  F  +    P+     LV+  +    + 
Sbjct: 24  VGFSVFIAILIALPTGIILSRNFIKNYSEKLIFFFNIAQGLPSLAVIALVLPFLGIGFVP 83

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               L +  +      I+ N IAG +    D  E A    +T +     I LP   P  +
Sbjct: 84  AVTALIIYALL----PIIRNTIAGLNNIETDLIEAAQGMGMTPFEILYKIELPLALPVII 139

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       ++VS +   G       GLG  I          +++LG L+     +
Sbjct: 140 AGIQTAAVVTVGTAVVSNLIGAG-------GLGQMIFTGLAMFDRRKILLGSLLAAFIAI 192

Query: 568 ALNR 571
            ++R
Sbjct: 193 IIDR 196


>gi|307329320|ref|ZP_07608483.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306884988|gb|EFN16011.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 225

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 11/208 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           I +    + ++ +   +     +       +   ++  ++A+ I +PVG+ IG     + 
Sbjct: 2   IELLKDLLRWLTSGSQWSGTDGIATRLLEHLQYSLLATLVAAAIALPVGLLIGHTGRGAF 61

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                +    A P      LV        L+       L+       I+ N  AG +A  
Sbjct: 62  LAINLSGFGRALPTVG---LVTLVFLASGLSMWPVYISLVAL-AVPVIVTNTYAGMAAVD 117

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            + ++ A    +  ++    + LP   P  +TG   AC      + ++   S+G      
Sbjct: 118 PEVRDAARGQGMRWYQVLFQVELPLALPLIMTGLRLACVQVVATATIAAYVSFG------ 171

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            GLG Y+ +   +    +V+ G +++  
Sbjct: 172 -GLGRYVFDGLAQRDLVQVLGGAVLVGV 198



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 67/178 (37%), Gaps = 15/178 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +++         L   + R   + + +    +++P +G +T   +          I
Sbjct: 36  LLATLVAAAIALPVGLLIGHTGRGAFLAINLSGFGRALPTVGLVTLVFLASGLSMWPVYI 95

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+  I T        + Y  +  +  ++ + +R   +  +Q  + + +P ++P +
Sbjct: 96  SLVALAVPVIVT--------NTYAGMAAVDPEVRDAARGQGMRWYQVLFQVELPLALPLI 147

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           +  + ++          +  +  G       G+G Y+   + ++DL+ +L   + +  
Sbjct: 148 MTGLRLACVQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQVLGGAVLVGV 198


>gi|302391642|ref|YP_003827462.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Acetohalobium arabaticum DSM 5501]
 gi|302203719|gb|ADL12397.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 296

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 31/234 (13%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDI 106
           P + +          +TL +      SL+F+       A         R+   L P+++I
Sbjct: 61  PTSSNPGYGILSLIVSTLLVTIG---SLIFSVPLGIACAAYLAEVADSRVREALKPVIEI 117

Query: 107 MQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  IP  ++GFL   +V     +L+        +     +    +  +      ++  +P
Sbjct: 118 LAGIPSVVIGFLGIVLVGPMIADLFNLSNGLNAINGSILLGIMALPTIISISEDAISAVP 177

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + +E S +   + W     + +P ++ G+   +M+ M       +A  M         L
Sbjct: 178 EEYKEASLALGANRWHTLIKVVLPAALSGITAAVMLGMGRAIGETMAVLMATGNAP--AL 235

Query: 223 PG----------------IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           PG                +G           L AI   +  M  ++ L   ++ 
Sbjct: 236 PGSIFDSVRTMTATIAVELGEVPYNTTHYYSLFAIGLVLFVMTFIVNLVSDIVL 289



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 15/185 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-IPVGIWIGFR------PHISSKIQP 420
           +    +         G +++    +L+ I S+I+ +P+GI             +   ++P
Sbjct: 54  LTSTRWNPTSSNPGYGILSLIVSTLLVTIGSLIFSVPLGIACAAYLAEVADSRVREALKP 113

Query: 421 FAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             ++LA  P+ V          P++    +  +    +  S+L+       I+       
Sbjct: 114 VIEILAGIPSVVIGFLGIVLVGPMIADLFNLSNGLNAINGSILLGIMALPTIISISEDAI 173

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           SA P ++KE + +     W     ++LP          +   G A   ++   +A+    
Sbjct: 174 SAVPEEYKEASLALGANRWHTLIKVVLPAALSGITAAVMLGMGRAIGETMAVLMATGNAP 233

Query: 533 HLRTT 537
            L  +
Sbjct: 234 ALPGS 238


>gi|77407277|ref|ZP_00784223.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174114|gb|EAO77037.1| phosphate ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 268

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA             +  P ++++  IP + +    L   V +
Sbjct: 47  FIVTILSAIIATPFAIGAAVFMTEISPXYGSKIXQPAVELLVGIPSVVYGFIGLQIIVPF 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR  +E S +   + WQ  W 
Sbjct: 107 VRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLRAVPRHYKEASLAMGATRWQTIWR 165

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +  + PG+   ++  M+  +   +A +M+V                 T +   GIG+ 
Sbjct: 166 VILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLTTPAATLTSVLTMGIGNT 225

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +   ++   L ++   +L M        +L++R
Sbjct: 226 VMGTVQNNVLWSLALVLLIMSLAFNTVIKLIYR 258



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 25/223 (11%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANVF- 433
                +   +    ++  IIA+   I   +++            QP  +LL   P+ V+ 
Sbjct: 37  FGAFPMIAGSFIVTILSAIIATPFAIGAAVFMTEISPXYGSKIXQPAVELLVGIPSVVYG 96

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P V S            + +L +      + F  +    A P  +KE + + 
Sbjct: 97  FIGLQIIVPFVRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTVDSLRAVPRHYKEASLAM 155

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T W+    +IL    P   T  +     A+  ++  ++       L T+         
Sbjct: 156 GATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILPTSLTTPAATLT 215

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                G+G  +  + +      + L +LIM      + + ++ 
Sbjct: 216 SVLTMGIGNTVMGTVQNNVLWSLALVLLIMSLAFNTVIKLIYR 258


>gi|266621956|ref|ZP_06114891.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
 gi|288866345|gb|EFC98643.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
          Length = 241

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A+ IS++       +  +S RL   L      ++ +P L  L   + +          
Sbjct: 42  LMALAISVILGISAGYVCVRSPRLEKWLTGTFQTLRIVPSLAILILLIPFLGTGV----- 96

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  +    L  +P  + E +    ++  Q  + +  P + P +
Sbjct: 97  ---KPALVALVLLAIPPILLNTVTGLTEVPDFMLETASGLGMTEKQVMYRVKFPMAFPLI 153

Query: 193 VWNMMMSM 200
           +  +  +M
Sbjct: 154 MTGVKTAM 161



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + I+ I+ I  G      P +   +    Q L   P+     L++  +        +
Sbjct: 42  LMALAISVILGISAGYVCVRSPRLEKWLTGTFQTLRIVPSLAILILLIPFLGTGVKPALV 101

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L LL I      IL N + G +  P+   E AS   +T  +    +  P  FP  +TG 
Sbjct: 102 ALVLLAIP----PILLNTVTGLTEVPDFMLETASGLGMTEKQVMYRVKFPMAFPLIMTGV 157

Query: 511 ITAC 514
            TA 
Sbjct: 158 KTAM 161


>gi|302870308|ref|YP_003838945.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|315503415|ref|YP_004082302.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|302573167|gb|ADL49369.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|315410034|gb|ADU08151.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 229

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 8/143 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++       T     A+VI+ L     A LA   R L   ++ +  ++ ++P L   
Sbjct: 24  NSDTILAALREHTWLTARAVVIAALVALPLAVLAYWFRSLSAPILAVTGVLYTVPSLALF 83

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F   Y        +    L A+  I  + +          L  +P ++ E +       
Sbjct: 84  AFLAPYLGIGAITVLTVVALYALLVIVRNAL--------AGLNQVPPEVREAAEGMGYGR 135

Query: 177 WQKFWYLGVPFSMPGLVWNMMMS 199
           W + + + +P ++PG++  + ++
Sbjct: 136 WGRLFRIELPLALPGILTGVRLA 158



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA+++ +P+ +   +   +S+ I     +L   P+   F  +   +    +     +
Sbjct: 42  AVVIAALVALPLAVLAYWFRSLSAPILAVTGVLYTVPSLALFAFLAPYLGIGAITVLTVV 101

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L  +      I+ N +AG +  P + +E A       W     I LP   P  +TG   
Sbjct: 102 ALYALLV----IVRNALAGLNQVPPEVREAAEGMGYGRWGRLFRIELPLALPGILTGVRL 157

Query: 513 A 513
           A
Sbjct: 158 A 158


>gi|257879886|ref|ZP_05659539.1| phosphate ABC transporter [Enterococcus faecium 1,230,933]
 gi|257882730|ref|ZP_05662383.1| phosphate ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884044|ref|ZP_05663697.1| phosphate ABC transporter [Enterococcus faecium 1,231,501]
 gi|257886816|ref|ZP_05666469.1| phosphate ABC transporter [Enterococcus faecium 1,141,733]
 gi|257890402|ref|ZP_05670055.1| phosphate ABC transporter [Enterococcus faecium 1,231,410]
 gi|257893009|ref|ZP_05672662.1| phosphate ABC transporter [Enterococcus faecium 1,231,408]
 gi|257895385|ref|ZP_05675038.1| phosphate ABC transporter [Enterococcus faecium Com12]
 gi|257897996|ref|ZP_05677649.1| phosphate ABC transporter [Enterococcus faecium Com15]
 gi|258616651|ref|ZP_05714421.1| phosphate ABC transporter, permease protein [Enterococcus faecium
           DO]
 gi|260559604|ref|ZP_05831784.1| phosphate ABC transporter [Enterococcus faecium C68]
 gi|293378254|ref|ZP_06624423.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium PC4.1]
 gi|293556393|ref|ZP_06674974.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1039]
 gi|293560381|ref|ZP_06676874.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1162]
 gi|293568699|ref|ZP_06680014.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1071]
 gi|293572402|ref|ZP_06683382.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E980]
 gi|294616274|ref|ZP_06696067.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1636]
 gi|294617606|ref|ZP_06697236.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1679]
 gi|294622346|ref|ZP_06701379.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium U0317]
 gi|257814114|gb|EEV42872.1| phosphate ABC transporter [Enterococcus faecium 1,230,933]
 gi|257818388|gb|EEV45716.1| phosphate ABC transporter [Enterococcus faecium 1,231,502]
 gi|257819882|gb|EEV47030.1| phosphate ABC transporter [Enterococcus faecium 1,231,501]
 gi|257822870|gb|EEV49802.1| phosphate ABC transporter [Enterococcus faecium 1,141,733]
 gi|257826762|gb|EEV53388.1| phosphate ABC transporter [Enterococcus faecium 1,231,410]
 gi|257829388|gb|EEV55995.1| phosphate ABC transporter [Enterococcus faecium 1,231,408]
 gi|257831950|gb|EEV58371.1| phosphate ABC transporter [Enterococcus faecium Com12]
 gi|257835908|gb|EEV60982.1| phosphate ABC transporter [Enterococcus faecium Com15]
 gi|260074272|gb|EEW62594.1| phosphate ABC transporter [Enterococcus faecium C68]
 gi|291588659|gb|EFF20492.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1071]
 gi|291590788|gb|EFF22504.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1636]
 gi|291596212|gb|EFF27475.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1679]
 gi|291598173|gb|EFF29272.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium U0317]
 gi|291601460|gb|EFF31731.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1039]
 gi|291605669|gb|EFF35110.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E1162]
 gi|291607464|gb|EFF36806.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium E980]
 gi|292643118|gb|EFF61259.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecium PC4.1]
          Length = 306

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
                +S +    +A  AA        +    +L P+++++  IP + +    L+  V +
Sbjct: 90  FIVTFLSAIVATPFAIGAAVFMTEISPKNGTKILQPVIELLVGIPSVVYGFIGLSVIVPF 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  + 
Sbjct: 150 VRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGATRWQTIYK 208

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 209 VVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYIL 465
             +QP  +LL   P+ V+         P V S      + +    ++  +MI  T   + 
Sbjct: 121 KILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VT 177

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
              +    A P  ++E + +   T W+    ++L    P  +T  +     A+  ++  +
Sbjct: 178 TMTVDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQ 237

Query: 526 VASWGHIHLRTTGL 539
           +   G+  L  TGL
Sbjct: 238 MV-IGNAALMPTGL 250


>gi|108803825|ref|YP_643762.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108765068|gb|ABG03950.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 236

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++ I+L  +     L A+ R+    +V +  ++ +IP L      V       PG  IG
Sbjct: 45  VSLAIALAVSLPTGVLVARYRKAYPPVVFLAGLLFTIPSLALFAILVTI-----PGVGIG 99

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              A I A+    +  +  +    L ++P +  + +R   L+  Q  + + +P ++P +V
Sbjct: 100 PN-AVIIALVAYSILVLVRNTVAGLDSVPPETIDAARGMGLTPRQILFKVELPLALPVIV 158

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++        V    I      I   G+G  I   I       I+        +  
Sbjct: 159 AGVRIA-------TVTVIGIATIGAYIAGGGLGQLIFDGIDRLFPTMIIAGAALATALAV 211

Query: 254 LYD 256
             D
Sbjct: 212 AAD 214



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 9/159 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V + IA  + +P G+ +         +   A LL   P+   F ++V  +    + PN  
Sbjct: 45  VSLAIALAVSLPTGVLVARYRKAYPPVVFLAGLLFTIPSLALFAILV-TIPGVGIGPNAV 103

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           +  L+ + +   ++ N +AG  + P +  + A    +T  +    + LP   P  V G  
Sbjct: 104 IIALVAY-SILVLVRNTVAGLDSVPPETIDAARGMGLTPRQILFKVELPLALPVIVAGVR 162

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            A       + +    + G       GLG  I +  ++ 
Sbjct: 163 IATVTVIGIATIGAYIAGG-------GLGQLIFDGIDRL 194


>gi|329923006|ref|ZP_08278522.1| choline transport system permease protein opuBB [Paenibacillus sp.
           HGF5]
 gi|328941779|gb|EGG38064.1| choline transport system permease protein opuBB [Paenibacillus sp.
           HGF5]
          Length = 221

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 69/198 (34%), Gaps = 17/198 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTF 118
           + +      +   SA+++  +       L   +R   L  ++  + ++ Q++P L  L  
Sbjct: 15  ILKALQEHLVLSFSAVLLGTVIAVPIGILLVYNRVGWLNSIVFFVANLFQTVPSLALLAI 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                 AI A+F   +  +  + Y    ++ + +   +R    S  Q
Sbjct: 75  LIPLLGIGM--------KPAILALFLYSLMPILRNTYDGFHSVDKGVLNSARGMGYSTAQ 126

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P ++  + ++      +   + +I  G       G+G  I   +     
Sbjct: 127 TILKIQLPLSLPYIMSGVRITTVYIISWATLASLIGAG-------GLGQLIVSGLGVNKP 179

Query: 239 LAILYAMLTMLGVIFLYD 256
             I    +  + +  + D
Sbjct: 180 EMIFIGGIGAILLALVAD 197



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 9/154 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
              +++ ++I +P+GI + +     ++S +   A L    P+     +++  +       
Sbjct: 27  FSAVLLGTVIAVPIGILLVYNRVGWLNSIVFFVANLFQTVPSLALLAILIPLLGIG---- 82

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L +   +   IL N   G  +        A     +  +    I LP   PY ++
Sbjct: 83  MKPAILALFLYSLMPILRNTYDGFHSVDKGVLNSARGMGYSTAQTILKIQLPLSLPYIMS 142

Query: 509 GAITAC--GGAWNASIVSEVASWGHIHLRTTGLG 540
           G         +W A++ S + + G   L  +GLG
Sbjct: 143 GVRITTVYIISW-ATLASLIGAGGLGQLIVSGLG 175


>gi|314934874|ref|ZP_07842233.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
 gi|313652804|gb|EFS16567.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
          Length = 211

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 71/169 (42%), Gaps = 15/169 (8%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +K+ +L  + + I  I+Q+IP L  L   +  F           +  AI A+F   +  +
Sbjct: 42  SKTDKLSKISLTIAGILQTIPTLAILALMIPLFGVG--------KTPAIIALFLYVLLPI 93

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    + NI  +++E  RS  ++G Q    + +P ++P ++  + +S      +   +
Sbjct: 94  LNNTIIGVQNIDSNVKEAGRSMGMTGIQLMKDVQLPLALPMILSGIRLSSVYVISWATLA 153

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +  G       G+G +I   +   +   I+ A + +  +  + D  L
Sbjct: 154 SYVGAG-------GLGDFIFNGLNLFEPAVIITATILVTLLALIVDFCL 195



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 11/150 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A +L   P      L++           + L L ++      IL N I G     ++ K
Sbjct: 54  IAGILQTIPTLAILALMIPLFGVGKTPAIIALFLYVLL----PILNNTIIGVQNIDSNVK 109

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E   S  +TG +  + + LP   P  ++G   +     + + ++     G       GLG
Sbjct: 110 EAGRSMGMTGIQLMKDVQLPLALPMILSGIRLSSVYVISWATLASYVGAG-------GLG 162

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            +I           ++   +++    L ++
Sbjct: 163 DFIFNGLNLFEPAVIITATILVTLLALIVD 192


>gi|22126867|ref|NP_670290.1| inner membrane permease of ABC transport system [Yersinia pestis
           KIM 10]
 gi|45440777|ref|NP_992316.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51595583|ref|YP_069774.1| ABC type choline/glycine/betaine transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806908|ref|YP_650824.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Antiqua]
 gi|108812937|ref|YP_648704.1| ABC transport integral membrane subunit [Yersinia pestis Nepal516]
 gi|145599766|ref|YP_001163842.1| ABC transport integral membrane subunit [Yersinia pestis Pestoides
           F]
 gi|149366808|ref|ZP_01888842.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CA88-4125]
 gi|153946949|ref|YP_001401747.1| quaternary amine ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|165924456|ref|ZP_02220288.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938306|ref|ZP_02226864.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009920|ref|ZP_02230818.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211411|ref|ZP_02237446.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400413|ref|ZP_02305926.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419448|ref|ZP_02311201.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423877|ref|ZP_02315630.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466724|ref|ZP_02331428.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis FV-1]
 gi|186894647|ref|YP_001871759.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|218928360|ref|YP_002346235.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CO92]
 gi|229841143|ref|ZP_04461302.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843247|ref|ZP_04463393.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894135|ref|ZP_04509321.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Pestoides A]
 gi|229903369|ref|ZP_04518482.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Nepal516]
 gi|270487178|ref|ZP_06204252.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503216|ref|YP_003567278.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Z176003]
 gi|21959901|gb|AAM86541.1|AE013901_2 putative inner membrane permease of ABC transport system [Yersinia
           pestis KIM 10]
 gi|45435635|gb|AAS61193.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51588865|emb|CAH20479.1| ABC type choline/glycine/betaine transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108776585|gb|ABG19104.1| ABC transport integral membrane subunit [Yersinia pestis Nepal516]
 gi|108778821|gb|ABG12879.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Antiqua]
 gi|115346971|emb|CAL19862.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CO92]
 gi|145211462|gb|ABP40869.1| ABC transport integral membrane subunit [Yersinia pestis Pestoides
           F]
 gi|149291182|gb|EDM41257.1| putative ABC transport integral membrane subunit [Yersinia pestis
           CA88-4125]
 gi|152958444|gb|ABS45905.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
 gi|165913684|gb|EDR32303.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923516|gb|EDR40648.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991316|gb|EDR43617.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207182|gb|EDR51662.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962189|gb|EDR58210.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050362|gb|EDR61770.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056726|gb|EDR66489.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186697673|gb|ACC88302.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis PB1/+]
 gi|229679139|gb|EEO75242.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Nepal516]
 gi|229689594|gb|EEO81655.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697509|gb|EEO87556.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704020|gb|EEO91033.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Pestoides A]
 gi|262361255|gb|ACY57976.1| putative ABC transport integral membrane subunit [Yersinia pestis
           D106004]
 gi|262365208|gb|ACY61765.1| putative ABC transport integral membrane subunit [Yersinia pestis
           D182038]
 gi|270335682|gb|EFA46459.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353675|gb|ADE64016.1| putative ABC transport integral membrane subunit [Yersinia pestis
           Z176003]
 gi|320015961|gb|ADV99532.1| putative ABC transport integral membrane subunit [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 278

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 20/200 (10%)

Query: 78  ISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           I++           +   +    V+  ++ + Q+ P +  L   V             +E
Sbjct: 88  IAVFIGVTTGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG--------FSE 139

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             AI A+    +  +       + ++   + EV+    +S  Q  W + +P + P +V  
Sbjct: 140 KPAIIALVLYGLLPILQGTIAGIESVSTSIREVAAGVGMSARQILWQVELPLAAPVIVAG 199

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVIF 253
           +  S+        A+    VG        +GS I + +   +   ++   A++ +L +I 
Sbjct: 200 IRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAAVVALLAIIT 252

Query: 254 LYDQLLF-RPMIVWSNKFRL 272
                 + R +  W  +  L
Sbjct: 253 DMIFDRWTRRLSRWRERHSL 272



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 73/221 (33%), Gaps = 20/221 (9%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           Y+ + F    V +V+ +   +   V + +     +  P G          S ++    + 
Sbjct: 66  YLQDTFFSLVVAHVLLVLASSSIAVFIGVTTGIAVTRPAG------KEFRSVVETVVAMG 119

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
             FP      + V  + +      + L L  +      IL   IAG  +     +EVA+ 
Sbjct: 120 QTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL----PILQGTIAGIESVSTSIREVAAG 175

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++  +    + LP   P  V G  T+       + ++         + T  LG+ I  
Sbjct: 176 VGMSARQILWQVELPLAAPVIVAGIRTSVIINIGTAAIA-------STVGTKTLGSPIII 228

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPLYLYGTR 583
                +   V+ G  ++    +  +     W   L  +  R
Sbjct: 229 GLSGFNTAYVIQGAAVVALLAIITDMIFDRWTRRLSRWRER 269


>gi|159040215|ref|YP_001539468.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157919050|gb|ABW00478.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 244

 Score = 66.9 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 8/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +            +A+V+  L  +        + R G ++V + ++  ++P L  
Sbjct: 22  TNPGGVLDRIGEHLSMSAAAVVLGCLVAWPIGLWLGHTERGGGLVVLVANLTLAVPTLAL 81

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + Y  +  +  +  + +R    S
Sbjct: 82  LTILPLTFLGFGRPAVVVALAVFAVP-------PLLANAYTGVRQVDPEARDAARGMGFS 134

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-TVIPLPGIGSYIALAIK 234
           GWQ    + +P ++P L      +          +  +  G    I   G G  IA    
Sbjct: 135 GWQLLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQIIRAGFGLDIAAGGG 194

Query: 235 EQDLLAILYAMLTMLGVIFL 254
           +     +L A L ML  + L
Sbjct: 195 QILAGGLLVAGLAMLVELVL 214



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 4/215 (1%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            A+G    ++ ++ +   + +   V+      +      +++  ++  P+G+W+G     
Sbjct: 3   AAVGPIEAAVVWLNDPLNWTNPGGVLDRIGEHLSMSAAAVVLGCLVAWPIGLWLGHTERG 62

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              +   A L  A P      ++      +     +    +        +L N   G   
Sbjct: 63  GGLVVLVANLTLAVPTLALLTILPLTFLGFGRPAVVVALAVFAVP---PLLANAYTGVRQ 119

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI-H 533
              + ++ A     +GW+  R + LP   PY   G  TA       + ++   + G +  
Sbjct: 120 VDPEARDAARGMGFSGWQLLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQ 179

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           +   G G  IA    +     +++  L M   ++ 
Sbjct: 180 IIRAGFGLDIAAGGGQILAGGLLVAGLAMLVELVL 214


>gi|167746148|ref|ZP_02418275.1| hypothetical protein ANACAC_00844 [Anaerostipes caccae DSM 14662]
 gi|317473301|ref|ZP_07932596.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|167654663|gb|EDR98792.1| hypothetical protein ANACAC_00844 [Anaerostipes caccae DSM 14662]
 gi|316899137|gb|EFV21156.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 266

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 72/192 (37%), Gaps = 10/192 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T+   +V   + ++  + +   + + P  +  I P+  +L + P +   P++
Sbjct: 70  SIFLHIGVTLAETLVSFALITLFSVLIATILWWFPTAAKIIDPYLVVLNSLPKSALAPIL 129

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + +FG+    + N+ +G      +   +  +   T        
Sbjct: 130 IVWLGNNMKTIIITAISIAVFGS----ILNLYSGFLHVDKERLTLIRTLGGTKKDCLTMA 185

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P   P  ++      G +    I+ E  +        +GLG  I   ++      V++
Sbjct: 186 VIPSCIPLLLSIMNVNIGLSLVGVIIGEFLA------ARSGLGYLIIYGSQVFKMDWVLM 239

Query: 558 GVLIMCCFVLAL 569
            ++++C   + L
Sbjct: 240 SIVLLCIIAMLL 251



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 14/216 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I+      +  HS+  +   T    L +  +  LF+ + AT+         ++ P
Sbjct: 53  SSPSRIIRCFYGMVTDHSIFLHIGVTLAETLVSFALITLFSVLIATILWWFPTAAKIIDP 112

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ S+P        +V+  N     +I A   A+F            ++Y    ++ 
Sbjct: 113 YLVVLNSLPKSALAPILIVWLGNNMKTIIITAISIAVFGSI--------LNLYSGFLHVD 164

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++   + R+   +         +P  +P L+  M +++      V+  E +         
Sbjct: 165 KERLTLIRTLGGTKKDCLTMAVIPSCIPLLLSIMNVNIGLSLVGVIIGEFLA------AR 218

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            G+G  I    +   +  +L +++ +  +  L   L
Sbjct: 219 SGLGYLIIYGSQVFKMDWVLMSIVLLCIIAMLLYAL 254


>gi|84495391|ref|ZP_00994510.1| ABC-type glycine betaine transport, permease protein [Janibacter
           sp. HTCC2649]
 gi|84384884|gb|EAQ00764.1| ABC-type glycine betaine transport, permease protein [Janibacter
           sp. HTCC2649]
          Length = 215

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 79/194 (40%), Gaps = 15/194 (7%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +++ LL        A +  RL  VL+    ++ +IP L          M L  G  +   
Sbjct: 26  LILGLLIALPLGWAARRWSRLYPVLISTSGLLYTIPSLALF-----VLMPLILGTQVLNP 80

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +  + A+    V  +  ++   L ++P  + + +R+    G+++F+ + +P ++P +   
Sbjct: 81  INVVVAMTVYTVALLVRTVADGLGSVPDHVLQAARAMGYRGFRRFFGIELPLAIPVIAAG 140

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++       V  + +I V         +G+ +           I+  +++ + +  L+
Sbjct: 141 LRVAAVSNVSIVSVASLIGVSQ-------LGNLLTDGYDRFITPEIVIGIVSCVVLALLF 193

Query: 256 DQLLF---RPMIVW 266
           D L+    R +  W
Sbjct: 194 DGLILLGQRLLTPW 207



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 8/199 (4%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
               +  L    ++   V +I+  +I +P+G        +   +   + LL   P+   F
Sbjct: 7   HWSEIFTLARSHVWLAGVPLILGLLIALPLGWAARRWSRLYPVLISTSGLLYTIPSLALF 66

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L+   +    LNP + + + M   T   ++  V  G  + P+   + A +    G+R +
Sbjct: 67  VLMPLILGTQVLNP-INVVVAMTVYTVALLVRTVADGLGSVPDHVLQAARAMGYRGFRRF 125

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             I LP   P    G   A     +   V+ +            LG  + +  ++   PE
Sbjct: 126 FGIELPLAIPVIAAGLRVAAVSNVSIVSVASLIGVSQ-------LGNLLTDGYDRFITPE 178

Query: 555 VVLGVLIMCCFVLALNRFL 573
           +V+G++      L  +  +
Sbjct: 179 IVIGIVSCVVLALLFDGLI 197


>gi|166031954|ref|ZP_02234783.1| hypothetical protein DORFOR_01655 [Dorea formicigenerans ATCC
           27755]
 gi|166028407|gb|EDR47164.1| hypothetical protein DORFOR_01655 [Dorea formicigenerans ATCC
           27755]
          Length = 269

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 61/171 (35%), Gaps = 10/171 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +     +T++  ++  ++ +   I V I + F   +S  + P+  +L + P +   PL+
Sbjct: 73  SIFLHTNVTLYETILSFLLVTATSILVTILLWFSRRLSEILDPYLVVLNSLPKSALAPLL 132

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +        +    + IFG+    + N+            ++  +           +
Sbjct: 133 IVWLGATKTTIIVAGMSVAIFGS----ILNLYTSFMTVDPGKLKLIYTLGGNRRHALLKV 188

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +LP   P  ++      G      I+ E  +         GLG  I  +++
Sbjct: 189 VLPFSLPAIISNMKVNIGLCLVGVIIGEFLA------AREGLGYLIIYASQ 233



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 14/176 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + + T    + + ++    + +   L   SRRL  +L P L ++ S+P        +V+ 
Sbjct: 77  HTNVTLYETILSFLLVTATSILVTILLWFSRRLSEILDPYLVVLNSLPKSALAPLLIVWL 136

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y S   +     ++  +   +       +
Sbjct: 137 GATKTTIIVAGMSVAIFGSI--------LNLYTSFMTVDPGKLKLIYTLGGNRRHALLKV 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            +PFS+P ++ NM +++      V+  E +          G+G  I  A +   + 
Sbjct: 189 VLPFSLPAIISNMKVNIGLCLVGVIIGEFLA------AREGLGYLIIYASQVFKMD 238


>gi|256762744|ref|ZP_05503324.1| phosphate ABC transporter [Enterococcus faecalis T3]
 gi|256683995|gb|EEU23690.1| phosphate ABC transporter [Enterococcus faecalis T3]
          Length = 306

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A            +S +    +A  AA        ++    L P+++++  IP + +   
Sbjct: 82  ALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 142 GLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 201 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 64/174 (36%), Gaps = 15/174 (8%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +     +  I+A+   I   +++        +  +QP  +LL   P+ V+
Sbjct: 79  MVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVY 138

Query: 434 --------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                    P V S      + +    ++  +MI  T   +    +    A P  ++E +
Sbjct: 139 GFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VTTMTVDALKAVPRHYREAS 195

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 196 LALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAAVMPTS 249


>gi|255654973|ref|ZP_05400382.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
 gi|296449721|ref|ZP_06891491.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Clostridium difficile NAP08]
 gi|296877962|ref|ZP_06901981.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Clostridium difficile NAP07]
 gi|296261445|gb|EFH08270.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Clostridium difficile NAP08]
 gi|296431030|gb|EFH16858.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Clostridium difficile NAP07]
          Length = 261

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 15/201 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R     ++A    I + I         + ++P   L  + P  +   L +     
Sbjct: 70  LYSIGRCFFSFLLAMFFAIILSIVSYLNRFFRNLLKPINALARSIPTMILVVLALIWFE- 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      ++ F   + IL+ NV+           E+AS + I        I LP I
Sbjct: 129 -----KDSTPFIVGFAIVFPILYDNVLGAILNIDKSLLEMASVYKIRFIDKVLKIYLPVI 183

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
               ++  ++    +   +I  EV         T G+G  I       +   +   ++I+
Sbjct: 184 KFQIISILVSTFSLSLKVAIAGEV-----YSQPTYGIGTMIQTEKINFNTSGIFAWIIIV 238

Query: 563 CCFVLAL---NRFLWHPLYLY 580
                 L    +FL    +L+
Sbjct: 239 LLISAILQIAQKFLARRAFLW 259



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 95/248 (38%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  II + +           + + +   +   S       +  R   + ++++ 
Sbjct: 26  CVILLFLWQIIALKIDNDIFLPTVGQVFNSIKEIILNSSFYIDILYSIGRCFFSFLLAMF 85

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  + + ++  +R    +L PI  + +SIP +  +   +++F       ++G   A +F 
Sbjct: 86  FAIILSIVSYLNRFFRNLLKPINALARSIPTMILVVLALIWFEKDSTPFIVG--FAIVFP 143

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I          ++  ++ NI + L E++  +++    K   + +P     ++  ++ + S
Sbjct: 144 ILYD-------NVLGAILNIDKSLLEMASVYKIRFIDKVLKIYLPVIKFQIISILVSTFS 196

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                 +A E+        P  GIG+ I       +   I   ++ +L +  +     + 
Sbjct: 197 LSLKVAIAGEVYS-----QPTYGIGTMIQTEKINFNTSGIFAWIIIVLLISAILQIAQKF 251

Query: 259 LFRPMIVW 266
           L R   +W
Sbjct: 252 LARRAFLW 259


>gi|251795655|ref|YP_003010386.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247543281|gb|ACT00300.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 224

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 70/190 (36%), Gaps = 21/190 (11%)

Query: 74  SAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++++  +         A SR   L  ++  + +++Q+IP         +  + +    +
Sbjct: 32  VSIILGAIVAIPVGIWLAGSRIGWLNSIVFTVANVLQTIPS--------LALLAILIPLL 83

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AIFA+F   +  +  + Y     +  ++ E +R    S  Q+   + +P S P 
Sbjct: 84  GIGRTPAIFALFLYSIMPIMRNTYSGFKAVDPNVMEAARGMGYSRLQRLLRIQLPLSFPF 143

Query: 192 LVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           ++  + ++      W  +          T+I   G+G  I   +       I+   +  +
Sbjct: 144 IMSGLRVTTVYIISWATL---------ATLIGAGGLGQLIFSGLGVNRKELIVTGAILAV 194

Query: 250 GVIFLYDQLL 259
            +    D +L
Sbjct: 195 LLALAADYVL 204



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 9/154 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V II+ +I+ IPVGIW+       ++S +   A +L   P+     +++  +       
Sbjct: 31  AVSIILGAIVAIPVGIWLAGSRIGWLNSIVFTVANVLQTIPSLALLAILIPLLGIGRT-- 88

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N  +G  A   +  E A     +  +    I LP  FP+ ++
Sbjct: 89  --PAIFALFLYSIMPIMRNTYSGFKAVDPNVMEAARGMGYSRLQRLLRIQLPLSFPFIMS 146

Query: 509 GAI--TACGGAWNASIVSEVASWGHIHLRTTGLG 540
           G    T    +W A++ + + + G   L  +GLG
Sbjct: 147 GLRVTTVYIISW-ATLATLIGAGGLGQLIFSGLG 179


>gi|297616825|ref|YP_003701984.1| binding-protein-dependent transporters inner membrane component
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297144662|gb|ADI01419.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophothermus lipocalidus DSM 12680]
          Length = 218

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++++  ++     +     L + +I  L    +     +  +L   ++     +Q+IP L
Sbjct: 8   LSMNSTTIITATVQHLYLALGSELIGCLIAIPFGIWLTRREKLADYVLAATGSIQTIPSL 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F +               L A+  +    +  +  + Y  + N+     E      
Sbjct: 68  ALLGFVLPLLGIG--------PLPAMVVLVLYSLLPVIRNTYTGIRNVNPVYIEAGTGVG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           ++  Q  W +  P ++P ++  + +S      W  + A          I   G+G  I  
Sbjct: 120 MNSRQLLWMVKFPLALPIIMAGVRISTVYLISWATLAA---------FIGAGGLGDLIIT 170

Query: 232 AIKEQDLLAILYAMLTMLGVIF 253
            I+  D   I+   +    +  
Sbjct: 171 GIQTADANFIIAGTVPTAVLAI 192



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 59/182 (32%), Gaps = 11/182 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++  +   +I  +I IP GIW+  R  ++  +      +   P+      V+  +    L
Sbjct: 23  LYLALGSELIGCLIAIPFGIWLTRREKLADYVLAATGSIQTIPSLALLGFVLPLLGIGPL 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  ++++  +   ++ N   G       + E  +   +   +    +  P   P  
Sbjct: 83  ----PAMVVLVLYSLLPVIRNTYTGIRNVNPVYIEAGTGVGMNSRQLLWMVKFPLALPII 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +     + + ++     G       GLG  I    +      ++ G +      
Sbjct: 139 MAGVRISTVYLISWATLAAFIGAG-------GLGDLIITGIQTADANFIIAGTVPTAVLA 191

Query: 567 LA 568
           + 
Sbjct: 192 IG 193


>gi|294678045|ref|YP_003578660.1| pyrimidine ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294476865|gb|ADE86253.1| pyrimidine ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 287

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 67/179 (37%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++    IT    +    + +   I + + I     +   + P+A      P     P+V
Sbjct: 82  SLVLHSWITFSATMAGFALGTAAGILLAVGIVHSRAMDMSVMPWAIASQTIPILAIAPMV 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   +  +++  + + + +L  ++ G  A      ++  +++ +G   +  +
Sbjct: 142 IVVLASLGIKGLIPKAIIAAYLSFFPVLVGMVKGLRAPDGMQLDLLRTYNASGAETFWKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           A   +IV+E+ +         GLGA +   +  G   ++ 
Sbjct: 202 RLPSSMPYLFASLKVGVAAALVGTIVAELPAGASQ-----GLGARLLSGSYYGQTIQIW 255



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  ++  T    ++   +      + A     SR + M ++P     Q+IPIL  
Sbjct: 78  TSKKSLVLHSWITFSATMAGFALGTAAGILLAVGIVHSRAMDMSVMPWAIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   +L    +I   + A +  F    + +   M + L        ++ R++  S
Sbjct: 138 APMVIVVLASLGIKGLIPKAIIAAYLSF----FPVLVGMVKGLRAPDGMQLDLLRTYNAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G + FW L +P SMP L  ++ + ++      + +E+           G+G+ +      
Sbjct: 194 GAETFWKLRLPSSMPYLFASLKVGVAAALVGTIVAELPAGASQ-----GLGARLLSGSYY 248

Query: 236 QDLLAIL 242
              + I 
Sbjct: 249 GQTIQIW 255


>gi|223042659|ref|ZP_03612708.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus capitis SK14]
 gi|222444322|gb|EEE50418.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus capitis SK14]
          Length = 231

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L + + +  L  +  ++ + +         AK +RL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELSFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPIITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  I   A ++   PA    
Sbjct: 16  NWAFLLELSFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPIITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G     ++ K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|217032508|ref|ZP_03437999.1| hypothetical protein HPB128_180g7 [Helicobacter pylori B128]
 gi|216945786|gb|EEC24409.1| hypothetical protein HPB128_180g7 [Helicobacter pylori B128]
          Length = 432

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 71/220 (32%), Gaps = 12/220 (5%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
            +A+ +    + Y++  F +   +Y I L       V +  ++  +  + +G+++ +   
Sbjct: 29  LIAMALKISVVKYLIKEF-HDRFIYFIDLIAQHFIIVALSSLLVLVFGVLIGVFVFYNSK 87

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             + + P    L   P+   F L +  +     N  L L L  +      I+ +      
Sbjct: 88  ARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKNALLVLVLYGLL----PIVHSTYNALK 143

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
               +  + A          +  +      P  + G   A       + +  +   G + 
Sbjct: 144 EAREEVIKAAIGLGCNPKELFFKVRFLLAIPQILVGLRIAVVMLVAMAGIGALIGAGGLG 203

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                    I       +   +V G  I+  F +  ++F+
Sbjct: 204 QA-------IFRGLNTQNTTLLVAGSFIIALFSVLADQFV 236



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  + ++ L+F  +       + +    L+P+++ + +IP L      +           
Sbjct: 64  VALSSLLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGVGLKN-- 121

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A+  +    +  +  S Y +L     ++ + +     +  + F+ +    ++P 
Sbjct: 122 ------ALLVLVLYGLLPIVHSTYNALKEAREEVIKAAIGLGCNPKELFFKVRFLLAIPQ 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +++      +VA   I        L      I   +  Q+   ++     +   
Sbjct: 176 ILVGLRIAV----VMLVAMAGIGALIGAGGLG---QAIFRGLNTQNTTLLVAGSFIIALF 228

Query: 252 IFLYDQLL 259
             L DQ +
Sbjct: 229 SVLADQFV 236


>gi|302521540|ref|ZP_07273882.1| permease membrane component [Streptomyces sp. SPB78]
 gi|318057201|ref|ZP_07975924.1| permease membrane protein [Streptomyces sp. SA3_actG]
 gi|302430435|gb|EFL02251.1| permease membrane component [Streptomyces sp. SPB78]
          Length = 328

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 86/289 (29%), Gaps = 9/289 (3%)

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
               +       R     R  G           +                P       ++
Sbjct: 24  DPAPERLARTATRYDRPHRARGDGGPQDDGREDDGRDGREDDGPRDEHDAPRGGRVERAS 83

Query: 338 QRVSYM-LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLII 395
           +R+S+  L    F +   +     +     +            IWL     +   V+   
Sbjct: 84  RRISWRELTFLPFVLALALLGTWIYYDTATLDVIARNSLGGGNIWLRVRQHIQLTVISTF 143

Query: 396 IASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
              II IP+GI +  +    +      FA +  A PA     L+V  +        + + 
Sbjct: 144 FVLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTGEFPALVGII 203

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  I      +L N IAG  A      E A    ++       + LP   P  ++G  TA
Sbjct: 204 IYAIL----PVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILSGVRTA 259

Query: 514 CGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                  A++ +     G   + T G+          GS   +VL +L+
Sbjct: 260 LVLNVGTATLATFGGGGGLGDIITAGITNQRMSVLVIGSILTIVLALLV 308



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 10/184 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                    +  ++ + L G         +  I   +L   ++     +     + +   
Sbjct: 85  RISWRELTFLPFVLALALLGTWIYYDTATLDVIARNSLGGGNIWLRVRQHIQLTVISTFF 144

Query: 79  SLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            L+       L  + R  +   V V   +I Q+ P LG L   V++            E 
Sbjct: 145 VLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTG--------EF 196

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+  I    +  +  +    L      L E +R   +S       + +P ++P ++  +
Sbjct: 197 PALVGIIIYAILPVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILSGV 256

Query: 197 MMSM 200
             ++
Sbjct: 257 RTAL 260


>gi|332161036|ref|YP_004297613.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665266|gb|ADZ41910.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330859439|emb|CBX69784.1| putative osmoprotectant uptake system permease protein yehY
           [Yersinia enterocolitica W22703]
          Length = 384

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + + +V ++           +S R        L+I+Q+IP +      +     L     
Sbjct: 184 LFATLVPAMFLGIPLGLFCFRSPRFQPTAFSTLNIIQTIPSIALFGLLIAPLAGLAAAIP 243

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ +
Sbjct: 244 WLAEHGVSGIGFAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLFFRV 303

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +V  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 304 QIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 356

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 357 GVIPVVVMAVVVDSLF 372



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  + IP+G++    P           ++   P+   F L+++ ++    
Sbjct: 181 LQILFATLVPAMFLGIPLGLFCFRSPRFQPTAFSTLNIIQTIPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 241 AIPWLAEHGVSGIGFAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  V+G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FRVQIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVVVMAVVVDSLF 372


>gi|328951026|ref|YP_004368361.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451350|gb|AEB12251.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 407

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 15/239 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
           + ++  +L+G+        +V      +    L  +     L    A+  ++        
Sbjct: 157 LVVLGHILYGVVAGGAENLLVLEFQREIRRGQLQIHLLEHLLLTGFALAFAVGIGVPLGI 216

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--------GKVIGAELAAIF 140
             +   R+ +V + +  ++ +IP +      +     L          G        AI 
Sbjct: 217 WGSYRERVALVSLWVAGVIFTIPSIALFAMLLDPLAALSRAYPALRSVGISGLGAAPAIT 276

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+    +  +  + Y  L ++P    + +R   ++  Q  W + +P ++P ++  +    
Sbjct: 277 ALTLYALLPVIRNTYVGLKSVPEAQVDAARGMGMTTRQILWRVQLPRAVPVIMAGVR--- 333

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                  V +  I     +I   G+G YI   I    L+ IL   +  + + F  D +L
Sbjct: 334 ----NAAVLTVGIATIAQLIGAGGLGFYIFTGIARVSLVQILLGTIPAVLLAFSVDGVL 388



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 100/292 (34%), Gaps = 25/292 (8%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
             R   +SS  + S +   +      L + R  +P + +   +      +L    + VV 
Sbjct: 110 IARVALWSSGAWLSLVGFGLVFSAGVLLLRRQGYPRSLVTAVTWLPGLVVLGHILYGVVA 169

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G A  +        +     Q  ++++    +T F     +  A  I +P+GIW  +R  
Sbjct: 170 GGAENLLVLEFQREIRRGQLQ--IHLLEHLLLTGF----ALAFAVGIGVPLGIWGSYRER 223

Query: 414 ISSKIQPFAQLLAAFPANVFF-----PLVVSCVSYYHLNP-------NLWLSLLMIFGTQ 461
           ++      A ++   P+   F     PL     +Y  L                +     
Sbjct: 224 VALVSLWVAGVIFTIPSIALFAMLLDPLAALSRAYPALRSVGISGLGAAPAITALTLYAL 283

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N   G  + P    + A    +T  +    + LP   P  + G         NA+
Sbjct: 284 LPVIRNTYVGLKSVPEAQVDAARGMGMTTRQILWRVQLPRAVPVIMAGVR-------NAA 336

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +++   +     +   GLG YI     + S  +++LG +       +++  L
Sbjct: 337 VLTVGIATIAQLIGAGGLGFYIFTGIARVSLVQILLGTIPAVLLAFSVDGVL 388


>gi|318604909|emb|CBY26407.1| osmoprotectant ABC transporter permease protein YehY [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 384

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           + + +V ++           +S R        L+I+Q+IP +      +     L     
Sbjct: 184 LFATLVPAMFLGIPLGLFCFRSPRFQPTAFSTLNIIQTIPSIALFGLLIAPLAGLAAAIP 243

Query: 132 IGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             AE          AI A+    +  +  ++   L  +P  + E +R   ++  Q F+ +
Sbjct: 244 WLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLFFRV 303

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP +V  + +         V + +I  G       G+G+ +   +    L  +L 
Sbjct: 304 QIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDLVLL 356

Query: 244 AMLTMLGVIFLYDQLL 259
            ++ ++ +  + D L 
Sbjct: 357 GVIPVVVMAVVVDSLF 372



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A  + IP+G++    P           ++   P+   F L+++ ++    
Sbjct: 181 LQILFATLVPAMFLGIPLGLFCFRSPRFQPTAFSTLNIIQTIPSIALFGLLIAPLAGLAA 240

Query: 447 NPNLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++ NV+AG  A P+   E A    +T  + +
Sbjct: 241 AIPWLAEHGVSGIGLAPAIVALVLYALLPLVRNVVAGLDAVPDSVVESARGMGMTRSQLF 300

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + +P   P  V+G           ++V+ +   G       GLGA + +     +   
Sbjct: 301 FRVQIPIAMPLIVSGVRIIAVQTVGLAVVAALIGAG-------GLGAIVFQGLLSSALDL 353

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+LGV+ +    + ++   
Sbjct: 354 VLLGVIPVVVMAVVVDSLF 372


>gi|119953014|ref|YP_945223.1| phosphate transport system permease protein PstA [Borrelia
           turicatae 91E135]
 gi|119861785|gb|AAX17553.1| phosphate transport system permease protein PstA [Borrelia
           turicatae 91E135]
          Length = 513

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           ++     +   +DI+ SIP + F  F +++F+ ++   ++   + +   I       +  
Sbjct: 334 NKIFYKTVSMSVDILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPM----IIK 389

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +  ++L +IP+  +  S +   +  +    + +P S PG++  +++++        A  +
Sbjct: 390 TTEEALKSIPKSYKYASVALGANKTETIIKILLPASSPGILTGIVLAIGRA-LGETAVLL 448

Query: 213 IVVGDT 218
             +G  
Sbjct: 449 FTMGTN 454



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
                   +     +L++ PA +F        V       L+  +  SL+++      ++
Sbjct: 333 SNKIFYKTVSMSVDILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMIL-----PMI 387

Query: 466 FNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                    + P  +K  + +           I+LP   P  +TG + A G A
Sbjct: 388 IKTTEEALKSIPKSYKYASVALGANKTETIIKILLPASSPGILTGIVLAIGRA 440


>gi|29830050|ref|NP_824684.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29607160|dbj|BAC71219.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 239

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 11/190 (5%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++V+   +     +       +   ++  ++A+ I +PVG+ IG     +      A  
Sbjct: 17  AWLVSGDQWTGPDGIAHRLAEHLQYSLLATLVAAAIALPVGLLIGHTGRGAFLAINLASF 76

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
             A P      LVV       L+       L+       I+ N  AG +A   D K+ A 
Sbjct: 77  GRALPTVG---LVVLVFLASGLSMWPVYIALVAL-AVPAIVTNTYAGMTAVDPDVKDAAR 132

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
              +   +    + LP   P  +TG   A       + ++   S+G       GLG Y+ 
Sbjct: 133 GQGMRWHQVLFQVELPLALPLIMTGLRLALIQVVATATIAAYVSFG-------GLGRYVF 185

Query: 545 ESTEKGSFPE 554
           +   +    +
Sbjct: 186 DGLAQRDLVQ 195



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 65/181 (35%), Gaps = 15/181 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +    +      L A +++         L   + R   + + +    +++P +G   
Sbjct: 28  PDGIAHRLAEHLQYSLLATLVAAAIALPVGLLIGHTGRGAFLAINLASFGRALPTVG--- 84

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+ F+                A+    V  +  + Y  +  +  D+++ +R   +   
Sbjct: 85  LVVLVFLASGLSM-----WPVYIALVALAVPAIVTNTYAGMTAVDPDVKDAARGQGMRWH 139

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P ++P ++  + +++         +  +  G       G+G Y+   + ++D
Sbjct: 140 QVLFQVELPLALPLIMTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRD 192

Query: 238 L 238
           L
Sbjct: 193 L 193


>gi|71910767|ref|YP_282317.1| phosphate transporter permease [Streptococcus pyogenes MGAS5005]
 gi|71853549|gb|AAZ51572.1| phosphate transport system permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 272

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
               ++S +    +A  AA        +    +L P ++++  IP + +    L   V +
Sbjct: 53  FLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFIGLQVIVPF 112

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  L+ +  +F   +  +TF    SL  +PR   E S +   + WQ  W 
Sbjct: 113 MRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGATRWQTIWR 171

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +  + PG+   ++  M+  +   +A +M+V    
Sbjct: 172 VVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA 207



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF- 433
           L  + +   +    ++  IIA+   I   +++    P   +  +QP  +LL   P+ V+ 
Sbjct: 43  LGALPMITGSFLVTILSAIIATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYG 102

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P + S            + +L +      + F       A P  ++E + + 
Sbjct: 103 FIGLQVIVPFMRSIFGGTGFGILSGVCVLFVMI-LPTVTFMTTDSLRAVPRHYREASMAM 161

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P   T  I     A+  ++  ++       + ++
Sbjct: 162 GATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMPSS 212


>gi|226361730|ref|YP_002779508.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226240215|dbj|BAH50563.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 249

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I ++++   +     +  L    +    + +  A+++ +P+G++IG     S  +   A 
Sbjct: 2   IDFLLDGAHWTGPEGIPALLLQHLIYTFLALFAAALVAVPLGLYIGHTGRGSVVVAGLAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFK 480
            L A P      L+V  ++    +   +L    ++++      IL N  AG  +      
Sbjct: 62  SLRALPTIGLLILLVLVIAPSFSSKLAYLIPSLIVLVLLAIPPILTNTYAGIRSVDPAAV 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A        R    + LP   P  ++G  +A     + + V+   S G       GLG
Sbjct: 122 DAARGMGFRSMRILTEVELPCALPLMLSGVRSAVLQIVSTATVAAYISLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +   +  + ++  G +++    LA +
Sbjct: 175 RLLIDGKAQSDYAQMAAGAVLVSLLALAFD 204



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 71/202 (35%), Gaps = 8/202 (3%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P    +  +    A+  + L           + R  +V+  + + ++++P +G L 
Sbjct: 14  PEGIPALLLQHLIYTFLALFAAALVAVPLGLYIGHTGRGSVVVAGLANSLRALPTIGLLI 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+     +  K+     + I  +  + +  +  + Y  + ++     + +R       
Sbjct: 74  LLVLVIAPSFSSKLAYLIPSLIVLVLLA-IPPILTNTYAGIRSVDPAAVDAARGMGFRSM 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P ++P ++  +  ++         +  I +G       G+G  +     + D
Sbjct: 133 RILTEVELPCALPLMLSGVRSAVLQIVSTATVAAYISLG-------GLGRLLIDGKAQSD 185

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +    + +  +   +D  +
Sbjct: 186 YAQMAAGAVLVSLLALAFDLAI 207


>gi|154497695|ref|ZP_02036073.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC
           29799]
 gi|150273193|gb|EDN00338.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC
           29799]
          Length = 248

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +++ R+    +  +++   +             + P   ++ A P   F  L++  V+
Sbjct: 55  AALSLVRIFSGFLGGAVLGGLLAAACAAFRPARLLLTPAVGVIRATPVASFIILLLLWVT 114

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              +      + LM+    W    NV  G         E A ++    W+  R + LP +
Sbjct: 115 TGLVP--AVCAGLMVLPVVWG---NVYKGIIQTDPLLLEGAKTWRFGRWKTLRLVYLPSV 169

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            PY+ +G  TA G AW A + +EV     +      +G+ +  S      P +    + +
Sbjct: 170 LPYFASGCSTALGLAWKAGVAAEVLCVPKLA-----IGSQVYYSKLYLETPSLFAWTITV 224

Query: 563 CCFVLALNRFL 573
                 L++  
Sbjct: 225 LALSFLLDKIF 235



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 85/208 (40%), Gaps = 17/208 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q A+ + +R+ S  +   +   + A   A  R   ++L P + ++++ P+  F+   +
Sbjct: 51  LWQSAALSLVRIFSGFLGGAVLGGLLAAACAAFRPARLLLTPAVGVIRATPVASFIILLL 110

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++                   +    VW    ++Y+ +      L E ++++R   W+  
Sbjct: 111 LWVTTGL------VPAVCAGLMVLPVVWG---NVYKGIIQTDPLLLEGAKTWRFGRWKTL 161

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P  +P        ++   W   VA+E++ V         IGS +  +    +  +
Sbjct: 162 RLVYLPSVLPYFASGCSTALGLAWKAGVAAEVLCVPKLA-----IGSQVYYSKLYLETPS 216

Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIV 265
           +    +T+L + FL D++   LFR M  
Sbjct: 217 LFAWTITVLALSFLLDKIFGTLFRRMER 244


>gi|307311342|ref|ZP_07590985.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|307318875|ref|ZP_07598307.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306895596|gb|EFN26350.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306899643|gb|EFN30271.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 678

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 84/566 (14%), Positives = 174/566 (30%), Gaps = 62/566 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             F+L    +  L     +     + V ++       +L          M  ++ +  LF
Sbjct: 136 AVFLLSALPLIRLGWAGIKGLEGGEAVRVLFEAATFAALRNTLITAAGGMAISLFVGALF 195

Query: 83  TFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFL--------TFTVVYFMNLYPGKVI 132
            FV A    + +       ++P++ I   +  L ++            +           
Sbjct: 196 AFVVALTDIRGKLALSFAFMLPMM-IPPQVTALAWVEMSGPSSPLLKTLGLAPPLGSPQP 254

Query: 133 GAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              LA I  +   Q   + F ++   L   PRD  E +R    S W+ F  + +P S PG
Sbjct: 255 LYSLAGIALLLGVQHAPLVFLAVKAGLAAAPRDGVEAARLSGASPWRVFRDIVLPLSSPG 314

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++                      + GIG++             + A+L +   
Sbjct: 315 LIAGAAIAF---------------------VSGIGNF------------GIPAILGIPAS 341

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I     L+F     + +      T G     S ++ L      L          +  +  
Sbjct: 342 IETLPTLIFSRFASFGS-----STFGEIAVLSTLIALISAAGLLLQQRALKGRDYRLIGL 396

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
              +   TLG +R         + +   V+ +L +    +V    + +++ ++       
Sbjct: 397 AGARAAFTLGRLRIAAEALLWSILALLLVAPLLALVASSLVPAYGVPLSFDTMSLNAYGE 456

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPA 430
                   +     ++F      +    + IP G  +  R   ++S +    ++  A P 
Sbjct: 457 VLFRQSMTLTALKNSLFLASAAAVGLLAVTIPAGYLLVTRRGRLASLLAILIEIPYALPG 516

Query: 431 NVFFPLVVSCVS--YYHLNPNLWLSLLMIFGTQWYILFN-----VIAGASAFPNDFKEVA 483
            V     +   +     +  +L+ ++ +I    +          V++         +E A
Sbjct: 517 IVLAVAFILAFAAPLPLIGVSLYGTIWIILAAYFSSFLAVSLKPVMSAFLQMDPSLEEAA 576

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   R  R ++LP + P      I     A N   VS +            LG  I
Sbjct: 577 RLAGAGFLRRMRDVLLPLLAPAAGASVILVFLIAANELTVSALLWSAGTQT----LGVAI 632

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
               + GS        +++   V+ L
Sbjct: 633 FNLDDSGSSDLASALSVLVVVMVIGL 658


>gi|229095366|ref|ZP_04226358.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-29]
 gi|229101476|ref|ZP_04232217.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-28]
 gi|229114316|ref|ZP_04243736.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock1-3]
 gi|228669154|gb|EEL24576.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock1-3]
 gi|228681964|gb|EEL36100.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-28]
 gi|228688225|gb|EEL42111.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-29]
          Length = 297

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  + A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STLVSIGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V+++I    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIIGSTLVSIGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKQGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|227502865|ref|ZP_03932914.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Corynebacterium
           accolens ATCC 49725]
 gi|227076595|gb|EEI14558.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Corynebacterium
           accolens ATCC 49725]
          Length = 257

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  + +  ++ + + G        ++ DI   TL + S+        + ++ + ++ +
Sbjct: 18  DRLLIIGIPILVVLTVGGWLIWHATAELDDIEERTLQISSVLTMTREHLVLVVISALLVI 77

Query: 81  LFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                   +  +  ++ +  ++  I +I Q+ P++G +    ++     P  V+G    A
Sbjct: 78  ATAVPLGIVLTRKSTKFMAPIITSIANIGQAAPVVGVIVLLAIWLGFGEPVAVLGLWFYA 137

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +          ++   L  + + L E +    +S  Q    + +P ++P ++  +  
Sbjct: 138 FLPVLA--------NVIAGLRGVDKQLVEAAYGLSMSPIQVLTKVELPMALPVIMTGIRT 189

Query: 199 SM 200
           S+
Sbjct: 190 SL 191



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 5/208 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYV 379
              R+   E F +L    R+  ++      VV  V   + W +   + +       +  V
Sbjct: 1   MTRRWIPVEKFKRLTGEDRL--LIIGIPILVVLTVGGWLIWHATAELDDIEERTLQISSV 58

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           + +    +  VV+  ++     +P+GI        +  + P    +A          V+ 
Sbjct: 59  LTMTREHLVLVVISALLVIATAVPLGIV--LTRKSTKFMAPIITSIANIGQAAPVVGVIV 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++ +         L + F     +L NVIAG         E A    ++  +    + L
Sbjct: 117 LLAIWLGFGEPVAVLGLWFYAFLPVLANVIAGLRGVDKQLVEAAYGLSMSPIQVLTKVEL 176

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVA 527
           P   P  +TG  T+      A   +   
Sbjct: 177 PMALPVIMTGIRTSLVLLVGAGAFATFI 204


>gi|29376307|ref|NP_815461.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255972548|ref|ZP_05423134.1| phosphate ABC transporter [Enterococcus faecalis T1]
 gi|255975661|ref|ZP_05426247.1| phosphate ABC transporter [Enterococcus faecalis T2]
 gi|256619252|ref|ZP_05476098.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC
           4200]
 gi|256853312|ref|ZP_05558682.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256959165|ref|ZP_05563336.1| ABC-type phosphate transport system [Enterococcus faecalis DS5]
 gi|256961740|ref|ZP_05565911.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96]
 gi|256964936|ref|ZP_05569107.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704]
 gi|257079202|ref|ZP_05573563.1| ABC-type phosphate transporter [Enterococcus faecalis JH1]
 gi|257082367|ref|ZP_05576728.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol]
 gi|257084998|ref|ZP_05579359.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1]
 gi|257087043|ref|ZP_05581404.1| ABC-type phosphate transport system [Enterococcus faecalis D6]
 gi|257090073|ref|ZP_05584434.1| ABC phosphate transporter permease [Enterococcus faecalis CH188]
 gi|257416279|ref|ZP_05593273.1| ABC-type phosphate transport system [Enterococcus faecalis AR01/DG]
 gi|257419480|ref|ZP_05596474.1| ABC phosphate transporter [Enterococcus faecalis T11]
 gi|257422375|ref|ZP_05599365.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|294779415|ref|ZP_06744816.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis PC1.1]
 gi|300860681|ref|ZP_07106768.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TUSoD Ef11]
 gi|29343770|gb|AAO81531.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255963566|gb|EET96042.1| phosphate ABC transporter [Enterococcus faecalis T1]
 gi|255968533|gb|EET99155.1| phosphate ABC transporter [Enterococcus faecalis T2]
 gi|256598779|gb|EEU17955.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC
           4200]
 gi|256711771|gb|EEU26809.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256949661|gb|EEU66293.1| ABC-type phosphate transport system [Enterococcus faecalis DS5]
 gi|256952236|gb|EEU68868.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96]
 gi|256955432|gb|EEU72064.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704]
 gi|256987232|gb|EEU74534.1| ABC-type phosphate transporter [Enterococcus faecalis JH1]
 gi|256990397|gb|EEU77699.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol]
 gi|256993028|gb|EEU80330.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1]
 gi|256995073|gb|EEU82375.1| ABC-type phosphate transport system [Enterococcus faecalis D6]
 gi|256998885|gb|EEU85405.1| ABC phosphate transporter permease [Enterococcus faecalis CH188]
 gi|257158107|gb|EEU88067.1| ABC-type phosphate transport system [Enterococcus faecalis ARO1/DG]
 gi|257161308|gb|EEU91268.1| ABC phosphate transporter [Enterococcus faecalis T11]
 gi|257164199|gb|EEU94159.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|294453544|gb|EFG21945.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis PC1.1]
 gi|300849720|gb|EFK77470.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TUSoD Ef11]
 gi|323480916|gb|ADX80355.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis 62]
          Length = 306

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
                +S +    +A  AA        ++    L P+++++  IP + +    L+  V +
Sbjct: 90  FIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVYGFIGLSVIVPF 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  + 
Sbjct: 150 VRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGATRWQTIYK 208

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 209 VVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 64/174 (36%), Gaps = 15/174 (8%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +     +  I+A+   I   +++        +  +QP  +LL   P+ V+
Sbjct: 79  MVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVY 138

Query: 434 --------FPLVVSCVSY--YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                    P V S      + +    ++  +MI  T   +    +    A P  ++E +
Sbjct: 139 GFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPT---VTTMTVDALKAVPRHYREAS 195

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 196 LALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAAVMPTS 249


>gi|283796467|ref|ZP_06345620.1| phosphate ABC transporter, permease protein PstC [Clostridium sp.
           M62/1]
 gi|291075878|gb|EFE13242.1| phosphate ABC transporter, permease protein PstC [Clostridium sp.
           M62/1]
 gi|295091391|emb|CBK77498.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Clostridium cf. saccharolyticum K10]
          Length = 312

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 6/151 (3%)

Query: 74  SAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++I+  F+   A        +       P+++I   IP + +    LT  V     ++
Sbjct: 89  LALLIAAPFSLGSAIFITDISPKFGEKFYRPVVEIFAGIPSVVYGWVGLTVLVPAIKTVF 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +       +T     +L  +P++    +     + WQ  + + +P 
Sbjct: 149 DRQVGHSILAAGIVLAVMIFPTITTVAADALRAVPKECRMAAYGLGSTRWQTIYKIVIPA 208

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + PG++  +++ ++  +   +A  M++   T
Sbjct: 209 AAPGIISGIILGLARAFGEALAVAMVIGQTT 239



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANV--FFPLVVSCVS 442
           +    +A +I  P  +G  I              +P  ++ A  P+ V  +  L V   +
Sbjct: 84  LCTCGLALLIAAPFSLGSAIFITDISPKFGEKFYRPVVEIFAGIPSVVYGWVGLTVLVPA 143

Query: 443 YY-----HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRY 496
                   +  ++  + +++    +  +  V A    A P + +  A     T W+    
Sbjct: 144 IKTVFDRQVGHSILAAGIVLAVMIFPTITTVAADALRAVPKECRMAAYGLGSTRWQTIYK 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           I++P   P  ++G I     A+  ++   +       L T+
Sbjct: 204 IVIPAAAPGIISGIILGLARAFGEALAVAMVIGQTTALPTS 244


>gi|86747698|ref|YP_484194.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
 gi|86570726|gb|ABD05283.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris HaA2]
          Length = 274

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V      D   +      T+   +   + A+I  I + +       +   + P+A +L 
Sbjct: 55  LVAQTLVADWPILSASLLATLATTLQGFLAAAIGGIALALLFNQSRWVEYSLFPYAVVLQ 114

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++      +L  +  +         + +L N   G ++   +   +   +
Sbjct: 115 VTPVIAIAPLLLI-----YLPQDTAVVACAFIVAFFPVLANTTLGLNSVDRNLAGLFRLY 169

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+    + LP   PY + G   A G +   ++V+E+A+          L   IAES
Sbjct: 170 GASRWQTLLRLKLPAALPYMLGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAES 227

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             + + P +   +L++    + +
Sbjct: 228 GYRLNIPRMFAALLLLSAAGIVI 250



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D   L      T    L   + + +     A L  +SR +   L P   ++Q  P++   
Sbjct: 63  DWPILSASLLATLATTLQGFLAAAIGGIALALLFNQSRWVEYSLFPYAVVLQVTPVIAIA 122

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++Y         +  + A +   F    + +  +    L ++ R+L  + R +  S 
Sbjct: 123 PLLLIY---------LPQDTAVVACAFIVAFFPVLANTTLGLNSVDRNLAGLFRLYGASR 173

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           WQ    L +P ++P ++  + ++        V +E+
Sbjct: 174 WQTLLRLKLPAALPYMLGGLRIAGGLSLIGAVVAEI 209


>gi|262383916|ref|ZP_06077052.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294814|gb|EEY82746.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 395

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 73  LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           + A+ +SL F    A   A+  + +   +L P+++++  IP + +    L   V      
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V     A    +    +  +      ++   PR ++E S +   + WQ  + + +P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240
           +S+ G+   +++ +       +A  M+     VI      P+  I + IA  + E     
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGG 362

Query: 241 ILYAMLTMLGVIFLYDQL 258
             Y  L MLG +     L
Sbjct: 363 AHYQALFMLGAVLFLITL 380



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 391 VVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSC 440
           +  I ++    + V I++         + ++P  +LLA  P+ V+         PL+   
Sbjct: 183 IGAIALSLPFGVAVAIYMAEIANTKTRNLLKPLIELLAGIPSVVYGFFGLVVIVPLIQKT 242

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +           S+++       I+          P   KE + +   T W+    +I+P
Sbjct: 243 LDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIP 302

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +  +   G A   ++   + +     + T+
Sbjct: 303 YSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTS 339


>gi|225351484|ref|ZP_03742507.1| hypothetical protein BIFPSEUDO_03079 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157828|gb|EEG71111.1| hypothetical protein BIFPSEUDO_03079 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 283

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 86/251 (34%), Gaps = 15/251 (5%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             + +R  P +  ++  + V      + +           +    +     +L      T
Sbjct: 27  AHVCKRRIPTVIAVVLLLAVWEAWVRIGNVPSTMIAAPSEIAQATVET-WSTLWPATQVT 85

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L      + ++LF  +   L   S      L+P+L   Q++P++      +++F     
Sbjct: 86  LLEGTVGFLFAVLFGILIGILLYCSCIANAALLPLLSAAQTMPLISIAPLFLIWFGFEIS 145

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           GK        I  +    ++ +     + L  +P+   +V+ +   +     W++ +  +
Sbjct: 146 GK--------IVIVTVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATKAWTLWHVKLRVA 197

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              +   + +S +  +     +E +          G+G ++  A        I  A L +
Sbjct: 198 ARQIYGGIRVSAAYIFATAATAEYLG------ARKGLGIWLQAAYNSFRTPLIFSATLVI 251

Query: 249 LGVIFLYDQLL 259
           + +  +   L+
Sbjct: 252 IAITGVLVCLV 262



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 20/231 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF----------TYQDVLYVIWLGCITMFRVVVLIIIAS 398
             VV  +A+  AW  IG + +            T +    +     +T+    V  + A 
Sbjct: 38  IAVVLLLAVWEAWVRIGNVPSTMIAAPSEIAQATVETWSTLWPATQVTLLEGTVGFLFAV 97

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           +  I +GI +      ++ + P        P     PL +    +      + +++  +F
Sbjct: 98  LFGILIGILLYCSCIANAALLPLLSAAQTMPLISIAPLFLIWFGFEISGKIVIVTVFGLF 157

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                I    I G  A P  + +VA +   T      ++ L         G   +    +
Sbjct: 158 ----PIAVQTIRGLEAVPQFYSDVALTCGATKAWTLWHVKLRVAARQIYGGIRVSAAYIF 213

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             +  +E            GLG ++  +      P +    L++      L
Sbjct: 214 ATAATAEYLGARK------GLGIWLQAAYNSFRTPLIFSATLVIIAITGVL 258


>gi|302343118|ref|YP_003807647.1| ABC transporter [Desulfarculus baarsii DSM 2075]
 gi|301639731|gb|ADK85053.1| ABC transporter related protein [Desulfarculus baarsii DSM 2075]
          Length = 523

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 13/216 (6%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             +AI   W ++  +    +  D      L  +++ RV V + +     + +G+  G  P
Sbjct: 35  SSLAIASPWDTLTALGQMLSQGDFWADHLL--VSLGRVTVGLGLGLAAGLSLGVLAGALP 92

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   +L + P  V   L +             +  ++       I  +V+ G 
Sbjct: 93  PLRRVLSPTRWMLMSVPGVVVIMLAMLWFGMGGA----MVVAIVATMVAPLIYISVVEGL 148

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            A      E+A  +H         I    +    + G + A G A    +++E       
Sbjct: 149 DAVDARQLEMARVYHFPLAMRLYRIHGMAMAGPLIAGGLMALGSAIRLVVLAEALG---- 204

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                GLG  +A +      P +   + ++C  V+A
Sbjct: 205 --AAEGLGYALALARTNLETPRLY-ALALLCVCVVA 237



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 16/219 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLP-QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           +       P D +  +   L        +   +  R+   + + L        LA     
Sbjct: 34  YSSLAIASPWDTLTALGQMLSQGDFWADHLLVSLGRVTVGLGLGLAAGLSLGVLAGALPP 93

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           L  VL P   ++ S+P +  +   +++F         GA + AI A   + +  +  S+ 
Sbjct: 94  LRRVLSPTRWMLMSVPGVVVIMLAMLWFGMG------GAMVVAIVATMVAPL--IYISVV 145

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + L  +     E++R +      + + +        L+   +M++      VV +E +  
Sbjct: 146 EGLDAVDARQLEMARVYHFPLAMRLYRIHGMAMAGPLIAGGLMALGSAIRLVVLAEALGA 205

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +      G+G  +ALA    +    LYA+  +   +  
Sbjct: 206 AE------GLGYALALARTNLETPR-LYALALLCVCVVA 237


>gi|297583765|ref|YP_003699545.1| phosphate ABC transporter inner membrane subunit PstC [Bacillus
           selenitireducens MLS10]
 gi|297142222|gb|ADH98979.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           selenitireducens MLS10]
          Length = 333

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 7/177 (3%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +   GI E           P      +LP +   + +  + A++I++ +    A   A+
Sbjct: 67  ALREVGIMEYLTTTRWYPSSPQGAGYGALP-FIMSSIMVTVGALIIAIPWGIFTAIYIAE 125

Query: 93  --SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQV 147
              RR+  +L P ++I+   P  ILGF+   ++   +    G   G        I +   
Sbjct: 126 IAPRRVREILKPAVEILAIFPSVILGFIALVILSPIVANIFGLSNGLTALTASLILSVMA 185

Query: 148 WNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                S+   S+ ++P+D  E + +   S W+    + VP +  G++  +M+     
Sbjct: 186 LPTIISIAEDSIKSVPKDYREAAYALGASRWETIKTVSVPAAKSGIMAGVMLGFGRA 242



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHIS 415
            + Y+     Y         G +      +++ + ++I  IP GI+            + 
Sbjct: 73  IMEYLTTTRWYPSSPQGAGYGALPFIMSSIMVTVGALIIAIPWGIFTAIYIAEIAPRRVR 132

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             ++P  ++LA FP+ +          P+V +     +    L  SL++       I+  
Sbjct: 133 EILKPAVEILAIFPSVILGFIALVILSPIVANIFGLSNGLTALTASLILSVMALPTIISI 192

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                 + P D++E A +   + W   + + +P      + G +   G A   ++   +A
Sbjct: 193 AEDSIKSVPKDYREAAYALGASRWETIKTVSVPAAKSGIMAGVMLGFGRAVGETMTVLMA 252

Query: 528 SWGHIHL 534
           +   I +
Sbjct: 253 AGNAIDM 259


>gi|260460943|ref|ZP_05809193.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259033520|gb|EEW34781.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 249

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  E  +     +  P+  +  SL          +L A V + +     A L  +    
Sbjct: 24  PGWFEPLLKPLTENNAPVIYNQGSLLTLTLLHLRTVLIATVAATIVAVALAILVTRPAGA 83

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +   +++I Q+ P +  L   V              E   + A+F   +  +  + 
Sbjct: 84  EFLPLSRSLVNIGQTFPPVAVLALAVPAVG--------FGEKPTLIALFLYGLLPIFENA 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +P ++ E +R   ++GWQ+   + +P S P ++  + +S       VV S    
Sbjct: 136 LTGLTTLPANVVEAARGAGMTGWQRLTKVELPLSAPIILGGIRLS-------VVISLATA 188

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-IFLYDQL 258
              + +    +G  I   +   +L  IL   L +  + + +YD L
Sbjct: 189 TIGSTVAARTLGEVIIAGLLSNNLAFILQGGLIVAALAVLIYDGL 233



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           +  + A+I+ + + I +  RP  +  +   +    +   FP      L V  V +     
Sbjct: 61  IATVAATIVAVALAILV-TRPAGAEFLPLSRSLVNIGQTFPPVAVLALAVPAVGFGEKPT 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L L  +      I  N + G +  P +  E A    +TGW+    + LP   P  + 
Sbjct: 120 LIALFLYGLL----PIFENALTGLTTLPANVVEAARGAGMTGWQRLTKVELPLSAPIILG 175

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +        ++S   +     +    LG  I       +   ++ G LI+    + 
Sbjct: 176 GIRLS-------VVISLATATIGSTVAARTLGEVIIAGLLSNNLAFILQGGLIVAALAVL 228

Query: 569 L 569
           +
Sbjct: 229 I 229


>gi|222094472|ref|YP_002528531.1| phosphate ABC transporter , permease [Bacillus cereus Q1]
 gi|221238529|gb|ACM11239.1| phosphate ABC transporter, permease [Bacillus cereus Q1]
 gi|324324758|gb|ADY20018.1| putative phosphate ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 296

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|182438401|ref|YP_001826120.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466917|dbj|BAG21437.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 288

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 8/159 (5%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--HIS 415
            I    +  I  +      + + W   + +  +    ++  II IP+GI +  R     +
Sbjct: 69  WITNIHLDSIAENSLTGGNVQLRWWQHVRLTAISTFWVL--IIAIPLGIALTRRRLRKAA 126

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
                 A +  A PA     L+V  +        + + +  +      +L N +AG  A 
Sbjct: 127 PAFTALANIGQATPAIGLLALLVIWLGIGPRTAIIGIVIYAVL----PVLSNTVAGLRAI 182

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +  E A    ++G      + LP   P  + G  TA 
Sbjct: 183 EPNMIEAARGMGMSGRGVLLKVELPLAVPLILAGVRTAL 221



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            +    L+          + R  +       + +I Q+ P +G L   V++         
Sbjct: 101 ISTFWVLIIAIPLGIALTRRRLRKAAPAFTALANIGQATPAIGLLALLVIWLGIG----- 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 AI  I    V  +  +    L  I  ++ E +R   +SG      + +P ++P 
Sbjct: 156 ---PRTAIIGIVIYAVLPVLSNTVAGLRAIEPNMIEAARGMGMSGRGVLLKVELPLAVPL 212

Query: 192 LVWNMMMSM 200
           ++  +  ++
Sbjct: 213 ILAGVRTAL 221


>gi|118464857|ref|YP_879607.1| ABC transporter permease [Mycobacterium avium 104]
 gi|118166144|gb|ABK67041.1| ABC transporter, permease protein [Mycobacterium avium 104]
          Length = 228

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 77/212 (36%), Gaps = 15/212 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I L        L  + R    +   +  ++ +IP L          + +  G  I
Sbjct: 23  LVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIPSLALF-----VVLPMIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   + A+       +  ++ ++L  +P  + + + +       +   + +P ++P L
Sbjct: 78  LDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYPRLTRMMKVELPLAVPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +        V    M+ VG  VI + G+GS+     +      IL  ++ +  + 
Sbjct: 138 IAGLRV------VVVTNIAMVSVGS-VIGIGGLGSWFTQGYQTGKSDQILAGIIALFALA 190

Query: 253 FLYDQLL---FRPMIVWSNKFRLERTTGIYPA 281
              D L+    R +  W++  R      +   
Sbjct: 191 VAVDGLIVLGGRLVTPWAHAVRGGARRSVVAP 222



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+    +     L  + +   +V ++I   I +P+G+ +  R          A ++   P
Sbjct: 2   HYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F ++   +    L+    +  L  +     ++  V+    A P    + A++    
Sbjct: 62  SLALFVVLPMIIGTRILDEANVMVALTAYTAA-LLVRAVLEALDAVPAQISDAATAVGYP 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P  + G             V  V   G       GLG++  +  + 
Sbjct: 121 RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIG-------GLGSWFTQGYQT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
           G   +++ G++ +    +A++  +
Sbjct: 174 GKSDQILAGIIALFALAVAVDGLI 197


>gi|213027859|ref|ZP_03342306.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 196

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 81/196 (41%), Gaps = 10/196 (5%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ ++++       L  + + L   ++    ++ +IP +      +  F  +  G  + 
Sbjct: 8   LAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALFGLMIPLFSLIGHGIGV- 66

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L A+ A+F   +  +  + + +L ++P  L E  R   ++ WQ+  ++ +P ++P + 
Sbjct: 67  --LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMALPVIF 124

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      +  + +I  G   + L          I   D+  ++   L +  +  
Sbjct: 125 GGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGISGSDIRMLIAGALMICLLAI 177

Query: 254 LYDQLLFRPMIVWSNK 269
           + D LL R  +V + K
Sbjct: 178 VLDWLLHRLQVVLAPK 193



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 8/197 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + +A II +P+G+ I     +++ +   A LL   P+   F L++   S       +
Sbjct: 7   ALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALFGLMIPLFSLIGHGIGV 66

Query: 451 WLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             ++  +   +   I+ N      + P   +E      +T W+  R++ +P   P    G
Sbjct: 67  LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMALPVIFGG 126

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA         ++ V   G + L                    ++ G L++C   + L
Sbjct: 127 IRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGISGSDIRMLIAGALMICLLAIVL 179

Query: 570 NRFLWHPLYLYGTRCLR 586
           +  L     +   + +R
Sbjct: 180 DWLLHRLQVVLAPKGIR 196


>gi|227529931|ref|ZP_03959980.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350116|gb|EEJ40407.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 299

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 92/256 (35%), Gaps = 25/256 (9%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           ++  + +    + +         +             A    +   S  V S +     A
Sbjct: 39  ILIFLTLKGIALFKDNGVSIWHFLTSTDWQPSHHHYGALPMIITSFSVTVFSGIIALPLA 98

Query: 88  TLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELA 137
            + A        ++    L P+++++  IP + +    LT  V     ++ G   G  LA
Sbjct: 99  LVVAIAITEMLPKKTYQYLQPLIELLVGIPSVVYGYLGLTVIVPNLRQVFGGTGFGI-LA 157

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +F   +  MT  +  SL  +P+   + S     + WQ    + +P +  G++  M+
Sbjct: 158 ATSVLFLMILPTMTSMIIDSLQAVPQKYRQASAGLGATRWQTISRVIIPSAKSGILTAMV 217

Query: 198 MSMSGGWFFVVASEMIVVGDTVIP--------------LPGIGSYIALAIKEQDLLAILY 243
             M+  +   +A +M++   T++P                GIG+ +        L ++  
Sbjct: 218 FGMARTFGEALAVQMVIGNTTIVPKSLMESSATLTSVLTTGIGNTVMGTASNNALWSLAL 277

Query: 244 AMLTMLGVIFLYDQLL 259
            +L M     L  +L+
Sbjct: 278 ILLVMSLTFNLLMRLV 293



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 86/241 (35%), Gaps = 23/241 (9%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           GV+I     S  +  +H  Y  +  +I    +T+F  ++ + +A ++ I +         
Sbjct: 55  GVSIWHFLTSTDWQPSHHHYGALPMIITSFSVTVFSGIIALPLALVVAIAITEM--LPKK 112

Query: 414 ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF----- 466
               +QP  +LL   P+ V+    L V   +   +       +L      + ++      
Sbjct: 113 TYQYLQPLIELLVGIPSVVYGYLGLTVIVPNLRQVFGGTGFGILAATSVLFLMILPTMTS 172

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +I    A P  +++ ++    T W+    +I+P      +T  +      +  ++  ++
Sbjct: 173 MIIDSLQAVPQKYRQASAGLGATRWQTISRVIIPSAKSGILTAMVFGMARTFGEALAVQM 232

Query: 527 ASWGHIHLR--------------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                  +               TTG+G  +  +    +   + L +L+M      L R 
Sbjct: 233 VIGNTTIVPKSLMESSATLTSVLTTGIGNTVMGTASNNALWSLALILLVMSLTFNLLMRL 292

Query: 573 L 573
           +
Sbjct: 293 V 293


>gi|193216875|ref|YP_002000117.1| spermidine/putrescine ABC transporter permease protein [Mycoplasma
           arthritidis 158L3-1]
 gi|193002198|gb|ACF07413.1| spermidine/putrescine ABC transporter permease protein [Mycoplasma
           arthritidis 158L3-1]
          Length = 287

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 14/200 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY-- 122
            +R+    L A  ISL+  F YA + A+S+    V++  L +   +  L   T +     
Sbjct: 74  MTRSITSGLFAATISLIIGFPYAFIIARSKS---VILKTLGLSLMLSPLAIFTISKALAV 130

Query: 123 ---FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              F  ++    +      IF +    +  M   +YQ L ++P ++ E S     S +Q 
Sbjct: 131 RGLFSAIFDENSLNNYFFMIFGMVYLYLPFMVMPLYQVLKDMPENIIEASEDLGYSRFQT 190

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P+S   ++    + +      ++ S+ ++   +   L  IG+ I       +  
Sbjct: 191 VFKVILPYSAKAILSGFAIVLMMSATSLIISDKLLPNGSQKQL--IGNLINQFANTANKF 248

Query: 240 AIL----YAMLTMLGVIFLY 255
            +       ++TM  ++ LY
Sbjct: 249 DLANASTLVIITMAVLMSLY 268



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 62/194 (31%), Gaps = 15/194 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL-----VVSC 440
           ++   +    I+ II  P    I     +  K    + +L        F +     V   
Sbjct: 77  SITSGLFAATISLIIGFPYAFIIARSKSVILKTLGLSLML---SPLAIFTISKALAVRGL 133

Query: 441 VSYYHLNPNLWLSLLMIFGTQW-YILFNVI---AGASAFPNDFKEVASSFHITGWRWWRY 496
            S      +L     MIFG  + Y+ F V+         P +  E +     + ++    
Sbjct: 134 FSAIFDENSLNNYFFMIFGMVYLYLPFMVMPLYQVLKDMPENIIEASEDLGYSRFQTVFK 193

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEV 555
           +ILP      ++G       +  + I+S+         +   +G  I +     + F   
Sbjct: 194 VILPYSAKAILSGFAIVLMMSATSLIISDKLLPNGSQKQL--IGNLINQFANTANKFDLA 251

Query: 556 VLGVLIMCCFVLAL 569
               L++    + +
Sbjct: 252 NASTLVIITMAVLM 265


>gi|118589881|ref|ZP_01547285.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
 gi|118437378|gb|EAV44015.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
          Length = 381

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 82/275 (29%), Gaps = 12/275 (4%)

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFP--ENFLQLCSNQRVSYMLDIFWFCVVCGVAI-G 358
            W   +            L   R   P     + L         L   W  +V G  I  
Sbjct: 100 FWALVAATWAASWLFVERLATWRHLSPLATRLINLAIPALFGITLLALWQVIVTGAGIPK 159

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +   +   I    T              +  V+    I         I +   P +   +
Sbjct: 160 VLLPAPSEIWVRLTNSGPTLWADFRQTFLKAVLAGYAIGCGSAFITAILVDRVPFLRRGL 219

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P   L++A P     P++V    +   +     + ++I  T + +L N ++G +A    
Sbjct: 220 LPIGNLVSALPIIGVAPIMVMWFGFDWPSK----AAVVIIMTFFPMLVNTVSGLAASDAM 275

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            +++  ++    W+    + LP   P+           A   +IV+E      +     G
Sbjct: 276 QRDLMRTYASNYWQTLFKLRLPMAMPFIFNALKINSTLALIGAIVAEFFGTPIV-----G 330

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +G  I+    + +   V   + +           +
Sbjct: 331 MGFRISTEVGRMNVDMVWAEIAVAALAGSLFYGLV 365



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 93/235 (39%), Gaps = 14/235 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISLLFTF 84
           +L +  + +   GI +  +P      V +T    +L     +T L+ +L+   I     F
Sbjct: 144 LLALWQVIVTGAGIPKVLLPAPSEIWVRLTNSGPTLWADFRQTFLKAVLAGYAIGCGSAF 203

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           + A L  +   L   L+PI +++ ++PI+G     V++F   +P K           +  
Sbjct: 204 ITAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSKAA--------VVII 255

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
              + M  +    L        ++ R++  + WQ  + L +P +MP +   + ++ +   
Sbjct: 256 MTFFPMLVNTVSGLAASDAMQRDLMRTYASNYWQTLFKLRLPMAMPFIFNALKINSTLAL 315

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              + +E         P+ G+G  I+  +   ++  +   +        L+  L+
Sbjct: 316 IGAIVAEFFGT-----PIVGMGFRISTEVGRMNVDMVWAEIAVAALAGSLFYGLV 365


>gi|82750979|ref|YP_416720.1| phosphate ABC transporter permease [Staphylococcus aureus RF122]
 gi|82656510|emb|CAI80932.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           RF122]
          Length = 305

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGKAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASHGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGKAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASHGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|332653563|ref|ZP_08419308.1| putative alkanesulfonate transport protein (ABC superfamily,
           membrane) [Ruminococcaceae bacterium D16]
 gi|332518709|gb|EGJ48312.1| putative alkanesulfonate transport protein (ABC superfamily,
           membrane) [Ruminococcaceae bacterium D16]
          Length = 255

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 27/248 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
               F   ++        WQ   +          L   W    T+  + V       I +
Sbjct: 2   AWRKFLTYLLPPAFWLGVWQLAAFFAQKQKLGIFLPTPWTVVQTLAALCVTGEFWCTIAL 61

Query: 403 PVG-IWIGF----------------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
            +G I  G                          P  +++ A P   F  +++  ++ Y 
Sbjct: 62  SLGRILAGMVLGTLLGALLAALTCACSWADLLFSPVIRMIRAVPVVSF--ILLVMLAVYR 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + +  LM+    W    NV  G         E+  ++  + W+  + I LP I PY
Sbjct: 120 STVPMVIVTLMVLPVVWS---NVKQGIGQADRQLLELGRAYRFSRWKKVKLIYLPSIQPY 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +++   T  G AW + + +EV            +G  +  +      P +     ++   
Sbjct: 177 FLSAVTTGMGLAWKSGVAAEVLCTPRQA-----IGTEVYNAKFYLEIPTLFAWTAVVVAL 231

Query: 566 VLALNRFL 573
            L +   L
Sbjct: 232 SLTMEWLL 239



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 20/266 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           M     L   +    +  ++ L AF      + I L        P  +V  +        
Sbjct: 1   MAWRKFLTYLLPPAFWLGVWQLAAFFAQKQKLGIFLP------TPWTVVQTLAALCVTGE 54

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                + +  R+L+ MV+  L   + A L        ++  P++ +++++P++ F+   +
Sbjct: 55  FWCTIALSLGRILAGMVLGTLLGALLAALTCACSWADLLFSPVIRMIRAVPVVSFILLVM 114

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +         VI      +  +    VW+   ++ Q +    R L E+ R++R S W+K 
Sbjct: 115 LAVYRSTVPMVI------VTLMVLPVVWS---NVKQGIGQADRQLLELGRAYRFSRWKKV 165

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P   P  +  +   M   W   VA+E++       P   IG+ +  A    ++  
Sbjct: 166 KLIYLPSIQPYFLSAVTTGMGLAWKSGVAAEVL-----CTPRQAIGTEVYNAKFYLEIPT 220

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +      ++ +    + LL   +  W
Sbjct: 221 LFAWTAVVVALSLTMEWLLAAAVRRW 246


>gi|257865776|ref|ZP_05645429.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872111|ref|ZP_05651764.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875404|ref|ZP_05655057.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
 gi|257799710|gb|EEV28762.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806275|gb|EEV35097.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809570|gb|EEV38390.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
          Length = 306

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    L       +S +    +A  AA        R    +L P+++++  IP + +   
Sbjct: 82  ALPMILGSFFVTFLSAIVATPFAIGAAVFMVEISPRNGEKILQPVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V    +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   
Sbjct: 142 GLSVIVPAVRSVFGGTGFGI-LAGTFVLFIMILPTVTTMTVDALRAVPRHYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 201 TRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 242



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 64/173 (36%), Gaps = 9/173 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPH-ISSKIQPFAQLLAAFPAN 431
           Q ++  + +   + F   +  I+A+   I   +++    P      +QP  +LL   P+ 
Sbjct: 77  QPLVGALPMILGSFFVTFLSAIVATPFAIGAAVFMVEISPRNGEKILQPVIELLVGIPSV 136

Query: 432 VFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVAS 484
           V+  + +S +       +      +     ++F      +    +    A P  ++E + 
Sbjct: 137 VYGFIGLSVIVPAVRSVFGGTGFGILAGTFVLFIMILPTVTTMTVDALRAVPRHYREASL 196

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +   T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 197 ALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAALMPTS 249


>gi|326203077|ref|ZP_08192943.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           papyrosolvens DSM 2782]
 gi|325986723|gb|EGD47553.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           papyrosolvens DSM 2782]
          Length = 305

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 73  LSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMNLYP 128
           L A++IS   +   A        +    +L P +++   IP +  G++  +V+  +    
Sbjct: 93  LLALIISTPLSVSIAIFMTEISPKLGKKLLQPAIEVFTGIPSVVYGWVGLSVLVPLIRAN 152

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +G  L A   + +  ++    S+   ++  I RD  E S S   + WQ  W + +P 
Sbjct: 153 FGGLGFSLLAGSLVLSIMIFPTIASVSADAIRAISRDYYEASLSIGATRWQTIWKIILPS 212

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +MPG++  +++ ++  +   +A +M++     IP
Sbjct: 213 AMPGILTGVVLGLARAFGEALAVQMVLGNTIRIP 246



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 17/194 (8%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI----IIASIIWIPVGIWIGF-----R 411
           +  I ++ +     D         I     +V      ++A II  P+ + I        
Sbjct: 55  YSPIEFLFSTVWKPDRGVSKGGPAIGTLIFIVGSVSVSLLALIISTPLSVSIAIFMTEIS 114

Query: 412 PHISS-KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYI 464
           P +    +QP  ++    P+ V+  + +S +       +  L  +L    L++    +  
Sbjct: 115 PKLGKKLLQPAIEVFTGIPSVVYGWVGLSVLVPLIRANFGGLGFSLLAGSLVLSIMIFPT 174

Query: 465 LFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           + +V      A   D+ E + S   T W+    IILP   P  +TG +     A+  ++ 
Sbjct: 175 IASVSADAIRAISRDYYEASLSIGATRWQTIWKIILPSAMPGILTGVVLGLARAFGEALA 234

Query: 524 SEVASWGHIHLRTT 537
            ++     I +  +
Sbjct: 235 VQMVLGNTIRIPHS 248


>gi|254773329|ref|ZP_05214845.1| ABC transporter, permease protein [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 228

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 77/212 (36%), Gaps = 15/212 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I L        L  + R    +   +  ++ +IP L          + +  G  I
Sbjct: 23  LVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIPSLALF-----VVLPMIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   + A+       +  ++ ++L  +P  + + + +       +   + +P ++P L
Sbjct: 78  LDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYPRLTRMMKVELPLAVPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +        V    M+ VG  VI + G+GS+     +      IL  ++ +  + 
Sbjct: 138 IAGLRV------VVVTNIAMVSVGS-VIRIGGLGSWFTQGYQTGKSDQILAGIIALFALA 190

Query: 253 FLYDQLL---FRPMIVWSNKFRLERTTGIYPA 281
              D L+    R +  W++  R      +   
Sbjct: 191 VAVDGLIVLGGRLVTPWAHAVRGGARRSVVAP 222



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+    +     L  + +   +V ++I   I +P+G+ +  R          A ++   P
Sbjct: 2   HYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F ++   +    L+    +  L  +     ++  V+    A P    + A++    
Sbjct: 62  SLALFVVLPMIIGTRILDEANVMVALTAYTAA-LLVRAVLEALDAVPAQISDAATAVGYP 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P  + G             V  V   G       GLG++  +  + 
Sbjct: 121 RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIRIG-------GLGSWFTQGYQT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
           G   +++ G++ +    +A++  +
Sbjct: 174 GKSDQILAGIIALFALAVAVDGLI 197


>gi|86607190|ref|YP_475953.1| quaternary amine ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86555732|gb|ABD00690.1| quaternary amine ABC transporter (QAT) family, permease protein
           [Synechococcus sp. JA-3-3Ab]
          Length = 213

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 20/199 (10%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q   +    +   + I+LL        +++S+ + +V++     ++ IP L  L   +
Sbjct: 18  LLQAFLQHLQLVAVPLGIALLVGLPLGFGSSRSQVVSLVVINAFSSLRVIPSLAILFLAI 77

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            YF   +         +A  A+    +  +  S   +  ++   L E +    ++  Q  
Sbjct: 78  PYFGLGFR--------SAAIALTILALPPILISTDVAFRSLDPALREAALGMGMTPAQVL 129

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD--- 237
            Y+ +P ++P ++  +          VVAS  +      I   G+GS+I L     D   
Sbjct: 130 RYVEIPLALPVILAGVKT----ATIEVVASATLAA---FIGAGGLGSFITLGFALYDTAI 182

Query: 238 --LLAILYAMLTMLGVIFL 254
             + AI  A+L M   + L
Sbjct: 183 LLVGAIPVALLAMGAEVVL 201



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 65/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V + IA ++ +P+G        +S  +      L   P+     L +        
Sbjct: 26  LQLVAVPLGIALLVGLPLGFGSSRSQVVSLVVINAFSSLRVIPSLAILFLAIPYFGLGFR 85

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +  + L++L        IL +      +     +E A    +T  +  RY+ +P   P  
Sbjct: 86  SAAIALTIL----ALPPILISTDVAFRSLDPALREAALGMGMTPAQVLRYVEIPLALPVI 141

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA      ++ ++     G       GLG++I           +++G + +    
Sbjct: 142 LAGVKTATIEVVASATLAAFIGAG-------GLGSFITLGFALYDTAILLVGAIPVALLA 194

Query: 567 LALNRFL 573
           +     L
Sbjct: 195 MGAEVVL 201


>gi|41406373|ref|NP_959209.1| ProZ [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118465737|ref|YP_879608.1| ABC transporter permease [Mycobacterium avium 104]
 gi|254773330|ref|ZP_05214846.1| ABC transporter, permease protein [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41394721|gb|AAS02592.1| ProZ [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167024|gb|ABK67921.1| ABC transporter, permease protein [Mycobacterium avium 104]
          Length = 238

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L             A+  S L       L   + R  +++V  ++ ++++P LG   
Sbjct: 20  PVGLAARILEHLEYTGIAVGASALIAVPVGLLIGHTGRGTLLVVGAVNGLRALPTLG--- 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                 +             ++ A+    V  +    Y  + N+   + + +R+  ++  
Sbjct: 77  -----VLLFGTLLFGLGLGPSLVALMLLGVPALLAGTYAGIANVEPTVVDAARAMGMTES 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + VP ++P ++  +           +             L G+G Y+   IKE++
Sbjct: 132 QVLLRVEVPNALPLILGGLR-------SATLQVVATATVAAYASLGGLGRYLIDGIKERE 184

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               L   LT+  +  + D LL
Sbjct: 185 FHLALVGALTVAALALVLDGLL 206



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++I Y+++   +   + +       +    + +  +++I +PVG+ IG     +  +   
Sbjct: 6   RAIAYLLSADNWTGPVGLAARILEHLEYTGIAVGASALIAVPVGLLIGHTGRGTLLVVGA 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      +++     + L     L  LM+ G    +L    AG +       +
Sbjct: 66  VNGLRALPTLG---VLLFGTLLFGLGLGPSLVALMLLG-VPALLAGTYAGIANVEPTVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P  + G  +A       ++     +    +    GLG 
Sbjct: 122 AARAMGMTESQVLLRVEVPNALPLILGGLRSA-------TLQVVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +  ++  F   ++G L +    L L+  L
Sbjct: 175 YLIDGIKEREFHLALVGALTVAALALVLDGLL 206


>gi|170025086|ref|YP_001721591.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
 gi|169751620|gb|ACA69138.1| binding-protein-dependent transport systems inner membrane
           component [Yersinia pseudotuberculosis YPIII]
          Length = 278

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 68/200 (34%), Gaps = 20/200 (10%)

Query: 78  ISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           I++           +   +    V+  ++ + Q+ P +  L   V             +E
Sbjct: 88  IAVFIGVTTGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG--------FSE 139

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             AI A+    +  +       + ++   + EV+    +S  Q  W + +P + P +V  
Sbjct: 140 KPAIIALVLYGLLPILQGTIAGIESVSTSIREVAAGVGMSARQILWQVELPLAAPVIVAG 199

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  S+        A+    VG        +GS I + +   +   ++     +  +  + 
Sbjct: 200 IRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAAVVALLAIIT 252

Query: 256 DQLL---FRPMIVWSNKFRL 272
           D +     R +  W  +  L
Sbjct: 253 DMIFDRWTRRLSRWRERHSL 272



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +   ++CG+  G+      +          +Y+       +   V+L++ +S I + +G+
Sbjct: 35  WALLILCGLVFGMTLLQRFFTALFPELDRPIYLQDTFFSLVVAHVLLVLASSSIAVFIGV 94

Query: 407 WIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             G            S ++    +   FP      + V  + +      + L L  +   
Sbjct: 95  TTGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL-- 152

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   IAG  +     +EVA+   ++  +    + LP   P  V G  T+       
Sbjct: 153 --PILQGTIAGIESVSTSIREVAAGVGMSARQILWQVELPLAAPVIVAGIRTSVIINIGT 210

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPL 577
           + ++         + T  LG+ I       +   V+ G  ++    +  +     W   L
Sbjct: 211 AAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAAVVALLAIITDMIFDRWTRRL 263

Query: 578 YLYGTR 583
             +  R
Sbjct: 264 SRWRER 269


>gi|15679721|ref|NP_276839.1| phosphate transporter permease PstC [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622860|gb|AAB86199.1| phosphate transporter permease PstC [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 291

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 81/215 (37%), Gaps = 17/215 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA----MV 77
           + A   +I I+ I++   +E         +      +   P         M+        
Sbjct: 16  ITAIFSIIAILLIIVFIFREGFPIFQGYGVTNFIFGMDWAPSDGKYGIFTMIVGSLYITF 75

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           +SL      + L A          +  +L P+++ + +IP + +    L   V +  +  
Sbjct: 76  LSLAIAVPLSILCAIFMAEVSPEIMRRILKPVIETLAAIPSVVYGFFGLIILVPFIRSSL 135

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            G   G   A+   I T  +     S+   +L ++P + +E S +   + WQ    +  P
Sbjct: 136 GGTGFGLLTAS--LILTVMIMPTIISVSEDALRSVPLEYKEASLALGATQWQTIRKVIFP 193

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++PG++ ++++ M       +A  M+    T IP
Sbjct: 194 AALPGIITSIILGMGRAIGETLAVIMVAGNVTQIP 228



 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 82/232 (35%), Gaps = 17/232 (7%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +   R    E  L + +   +  +L I  F    G  I   +    +I   F        
Sbjct: 2   ISKTREKLIEKGLFITAIFSIIAILLIIVFIFREGFPIFQGYGVTNFI---FGMDWAPSD 58

Query: 380 IWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPH------ISSKIQPFAQLLAAFPANV 432
              G  TM    + +  ++  I +P+ I             +   ++P  + LAA P+ V
Sbjct: 59  GKYGIFTMIVGSLYITFLSLAIAVPLSILCAIFMAEVSPEIMRRILKPVIETLAAIPSVV 118

Query: 433 F----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASS 485
           +      ++V  +  S       L  + L++       + +V      + P ++KE + +
Sbjct: 119 YGFFGLIILVPFIRSSLGGTGFGLLTASLILTVMIMPTIISVSEDALRSVPLEYKEASLA 178

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+  R +I P   P  +T  I   G A   ++   + +     + ++
Sbjct: 179 LGATQWQTIRKVIFPAALPGIITSIILGMGRAIGETLAVIMVAGNVTQIPSS 230


>gi|240118498|ref|ZP_04732560.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           PID1]
 gi|240124041|ref|ZP_04736997.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           PID332]
 gi|268604208|ref|ZP_06138375.1| abcb protein [Neisseria gonorrhoeae PID1]
 gi|268682667|ref|ZP_06149529.1| ABC transporter [Neisseria gonorrhoeae PID332]
 gi|268588339|gb|EEZ53015.1| abcb protein [Neisseria gonorrhoeae PID1]
 gi|268622951|gb|EEZ55351.1| ABC transporter [Neisseria gonorrhoeae PID332]
          Length = 229

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 GYVISSVGVAVATGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 85/220 (38%), Gaps = 20/220 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRMLSA 75
           D     + + ++ +   G         +   V +      L ++        +  R +  
Sbjct: 24  DFAGLSVAMVVVALWAWG-SAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSVVG 82

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    P       
Sbjct: 83  ISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP------- 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++ +
Sbjct: 136 -SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVISS 194

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           + ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 195 VGVAVATGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|159184205|ref|NP_353232.2| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Agrobacterium tumefaciens
           str. C58]
 gi|159139535|gb|AAK86017.2| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Agrobacterium tumefaciens
           str. C58]
          Length = 381

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 9/205 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
           A R     + +++ + +       L  K  RL   ++  L+I+Q+IP +      +    
Sbjct: 169 AVRHVELAIGSLIAATVAGIPLGILCYKVERLRAGVLNSLNIVQTIPSIALFGLLIAPLG 228

Query: 122 YFMNLYPGKVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +     PG             A  A+F   +  +  +    L  +   + E +R   ++ 
Sbjct: 229 WIAATVPGAARIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGLGMTP 288

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q+   +  P +MP ++  + + +        +A+ +   G  V    GIG      +  
Sbjct: 289 VQRLLRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDLVLL 348

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF 260
             +  +L      + +  L D  LF
Sbjct: 349 GTVPTVLLGFAAAITLDALIDSNLF 373



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 14/200 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIA-SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           Y     + W+  +    + +  +IA ++  IP+GI       + + +     ++   P+ 
Sbjct: 158 YTGRADIFWIEAVRHVELAIGSLIAATVAGIPLGILCYKVERLRAGVLNSLNIVQTIPSI 217

Query: 432 VFFPLVVSCVSYYHLNP------------NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             F L+++ + +                      + +   +   ++ N + G +   +  
Sbjct: 218 ALFGLLIAPLGWIAATVPGAARIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAI 277

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTG 538
           +E A    +T  +    +  P   P  +TG           A+I + +   G       G
Sbjct: 278 REAARGLGMTPVQRLLRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQG 337

Query: 539 LGAYIAESTEKGSFPEVVLG 558
           +G    +    G+ P V+LG
Sbjct: 338 IGQTAMDLVLLGTVPTVLLG 357


>gi|153847294|ref|ZP_01993926.1| ABC-type glycine betaine transport, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149744739|gb|EDM56207.1| ABC-type glycine betaine transport, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 177

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           LD+MQ++P   +L  T+V F     G V G     IFAI            Y  +  +P 
Sbjct: 81  LDLMQTVPTFVYLIPTLVLFGL---GIVPGLISTIIFAIAAP-----IRLTYLGIIKVPE 132

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
           +L E  ++F  S  +  + + +P ++P ++  +   +      VV
Sbjct: 133 ELLEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVV 177



 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 4/99 (4%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L+   P  V+    +  +  + L     L   +IF     I      G    P +  E  
Sbjct: 83  LMQTVPTFVYL---IPTLVLFGLGIVPGLISTIIFAIAAPIRL-TYLGIIKVPEELLEAG 138

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +F  +  +    + LP   P  + G       + +  +
Sbjct: 139 KAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVV 177


>gi|52144596|ref|YP_082232.1| phosphate ABC transporter, permease [Bacillus cereus E33L]
 gi|229195039|ref|ZP_04321816.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           m1293]
 gi|51978065|gb|AAU19615.1| phosphate ABC transporter, permease [Bacillus cereus E33L]
 gi|228588474|gb|EEK46515.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           m1293]
          Length = 297

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|282916654|ref|ZP_06324412.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus D139]
 gi|283770459|ref|ZP_06343351.1| phosphate transport system permease [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319141|gb|EFB49493.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus D139]
 gi|283460606|gb|EFC07696.1| phosphate transport system permease [Staphylococcus aureus subsp.
           aureus H19]
          Length = 305

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  V++I ++   L         +   +    T  +  +      +   MLS + +S++
Sbjct: 40  LLGLVVLIALLTQTLIKGISHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSII 99

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--- 135
                A      AK+ +    +   +  +  +P + F       F+     + +      
Sbjct: 100 LGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSI 159

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LAA   +    +  +  S  +++  +P  + E S     + WQ    + +P ++PG++  
Sbjct: 160 LAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTG 219

Query: 196 MMMSMSGG 203
            ++S+S  
Sbjct: 220 FILSLSRA 227



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  GI+  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGISHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|49483578|ref|YP_040802.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425452|ref|ZP_05601877.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428112|ref|ZP_05604510.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430743|ref|ZP_05607125.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433503|ref|ZP_05609861.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436344|ref|ZP_05612391.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282903968|ref|ZP_06311856.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905733|ref|ZP_06313588.1| phosphate ABC transporter permease PstA [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908704|ref|ZP_06316522.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282910968|ref|ZP_06318770.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914176|ref|ZP_06321963.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282919098|ref|ZP_06326833.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus C427]
 gi|282924281|ref|ZP_06331955.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus C101]
 gi|283958150|ref|ZP_06375601.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293501203|ref|ZP_06667054.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510164|ref|ZP_06668872.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus M809]
 gi|293526756|ref|ZP_06671441.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295427901|ref|ZP_06820533.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591138|ref|ZP_06949776.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241707|emb|CAG40397.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271909|gb|EEV04047.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274953|gb|EEV06440.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278871|gb|EEV09490.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281596|gb|EEV11733.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284626|gb|EEV14746.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282313668|gb|EFB44061.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus C101]
 gi|282316908|gb|EFB47282.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus C427]
 gi|282322244|gb|EFB52568.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324663|gb|EFB54973.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282326968|gb|EFB57263.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282331025|gb|EFB60539.1| phosphate ABC transporter permease PstA [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282595586|gb|EFC00550.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790299|gb|EFC29116.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920828|gb|EFD97891.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096208|gb|EFE26469.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467108|gb|EFF09626.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           subsp. aureus M809]
 gi|295128259|gb|EFG57893.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576024|gb|EFH94740.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312438212|gb|ADQ77283.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195279|gb|EFU25666.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 305

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|229083947|ref|ZP_04216250.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-44]
 gi|228699382|gb|EEL52064.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-44]
          Length = 297

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STLVSLGAVVISAPIALALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  SFGAVIFIVGSTLVSLGAVVISAPIALALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|239942216|ref|ZP_04694153.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239988682|ref|ZP_04709346.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291445670|ref|ZP_06585060.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291348617|gb|EFE75521.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 224

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 73/217 (33%), Gaps = 9/217 (4%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G+   +  ++     +             ++   V + +A  I +P+ +++G      +
Sbjct: 1   MGVIGDAWTWLTTGANWSGDGGAAHRLGEHLYVSGVSLAVACAIALPIALYLGHIGKGGA 60

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                + +  A P      L +  V+    +      + ++      +L N   G     
Sbjct: 61  LAVNLSNVGRAVPVFAV--LALFMVTSLRNSGYWPTIIALVLFAVPPLLTNAYVGMREVD 118

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A    ++G + +  + LP  +P  +TG  +A       + ++ +   G      
Sbjct: 119 RAVVEAARGMGMSGAQLFVRVELPLAYPMIMTGLRSAAVQVVATASIAAMVGLG------ 172

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            GLG  I          +V  G +++    L +   L
Sbjct: 173 -GLGRIITAGFNTYDTAQVFAGAVLVAGLALVVEGVL 208



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 69/186 (37%), Gaps = 13/186 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            ++ ++       A       + G + V + ++ +++P+   L   +V            
Sbjct: 36  VSLAVACAIALPIALYLGHIGKGGALAVNLSNVGRAVPVFAVLALFMV------TSLRNS 89

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
                I A+    V  +  + Y  +  + R + E +R   +SG Q F  + +P + P ++
Sbjct: 90  GYWPTIIALVLFAVPPLLTNAYVGMREVDRAVVEAARGMGMSGAQLFVRVELPLAYPMIM 149

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +          VVA+  I     ++ L G+G  I       D   +    + + G+  
Sbjct: 150 TGLR----SAAVQVVATASIAA---MVGLGGLGRIITAGFNTYDTAQVFAGAVLVAGLAL 202

Query: 254 LYDQLL 259
           + + +L
Sbjct: 203 VVEGVL 208


>gi|118581560|ref|YP_902810.1| phosphate ABC transporter inner membrane subunit PstA [Pelobacter
           propionicus DSM 2379]
 gi|118504270|gb|ABL00753.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Pelobacter propionicus DSM 2379]
          Length = 532

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +L   V SL F  + A      AK   L  ++   ++ +  +P + +  F + +F+
Sbjct: 287 TVMMVLLMSVFSLPFGVIAAVYLREYAKDGLLTRMVRIAVNNLAGVPSIVYGVFGLGFFV 346

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
               G +                G  L +   +    V  +  +  +SL +IPR + E S
Sbjct: 347 YGIGGSLDQLFFPERLPTPTFGTGGILWSSLTLALLTVPVVIIATEESLASIPRGIREGS 406

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + +Q    + +P + PG++  +++SM+  
Sbjct: 407 LALGATKFQTLTRILLPMATPGIMTGLILSMARA 440



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 26/157 (16%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPH-------ISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F  V+++++ S+  +P G+              ++  ++     LA  P+ V+    + 
Sbjct: 284 IFGTVMMVLLMSVFSLPFGVIAAVYLREYAKDGLLTRMVRIAVNNLAGVPSIVYGVFGLG 343

Query: 440 CVSY-------------------YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              Y                   +     LW SL +   T   ++       ++ P   +
Sbjct: 344 FFVYGIGGSLDQLFFPERLPTPTFGTGGILWSSLTLALLTVPVVIIATEESLASIPRGIR 403

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E + +   T ++    I+LP   P  +TG I +   A
Sbjct: 404 EGSLALGATKFQTLTRILLPMATPGIMTGLILSMARA 440


>gi|285017487|ref|YP_003375198.1| binding-protein-dependent transport systems inner membrane
           component;substrate-binding region of ABC-type glycine
           betaine transport system [Xanthomonas albilineans GPE
           PC73]
 gi|283472705|emb|CBA15210.1| hypothetical binding-protein-dependent transport systems inner
           membrane component;substrate-binding region of abc-type
           glycine betaine transport system [Xanthomonas
           albilineans]
          Length = 496

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 18/235 (7%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLD--VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           + LH   E+ V  D + I     D  +  L Q        +  ++ ++LL       LAA
Sbjct: 266 VKLHKRAESAVAADWLGISAPAQDGRLLRLLQRTREHLTLVGLSLGLALLAALPLGILAA 325

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +  RLG  L+ +  ++Q++P L    F +  F              AI A+F   +  + 
Sbjct: 326 QRPRLGQALLALTGVLQTLPSLAVFVFMIPLFGIG--------AKPAIAALFLYSLLPIV 377

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            + +  L  I R+L E + +  L    + W + +P +M  ++  +  +       V+   
Sbjct: 378 RNTHAGLTGIARELRETAAAIGLPASTRLWRIELPLAMRTILAGIKTA------AVINVG 431

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
              +G  +I   G G  I   I+  DL  IL   +    +  L  Q LF  +  W
Sbjct: 432 TATLG-ALIGAGGYGQPILTGIRLDDLGLILEGAVPAAALALLV-QGLFEGLERW 484



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 4/122 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           RP +   +     +L   P+   F  ++                 +   +   I+ N  A
Sbjct: 327 RPRLGQALLALTGVLQTLPSLAVFVFMIPLFGIGAK----PAIAALFLYSLLPIVRNTHA 382

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G +    + +E A++  +        I LP      + G  TA       + +  +   G
Sbjct: 383 GLTGIARELRETAAAIGLPASTRLWRIELPLAMRTILAGIKTAAVINVGTATLGALIGAG 442

Query: 531 HI 532
             
Sbjct: 443 GY 444


>gi|88855059|ref|ZP_01129724.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815587|gb|EAR25444.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
          Length = 250

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +N+LL  +Q    P  +    PI      L ++   T      ++ ++ L          
Sbjct: 1   MNLLLEALQWLFSPERLEGSNPI---PLRLEEHLFYT----FISVALAALIAIPLGFFIG 53

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            + +     V +    +++P  G + F V+             + AAI A     + ++ 
Sbjct: 54  HTGKGRDFAVGLSGAARALPSFGLILFLVLLIGVAQAQ----LQFAAILAFVLLAIPSIL 109

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
              Y  +  + R + + +R+  ++ WQ  W + VP  +P L+  +  S       VVA+ 
Sbjct: 110 AGAYAGVEAVDRRVIDAARAVGMTEWQILWKVEVPIGLPLLIGGLRAST----LQVVATA 165

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
            +      + L G+G YI   +  Q    +L
Sbjct: 166 TLAA---YVGLGGLGIYIFRGLPLQRYDEML 193



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 7/198 (3%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  +++ ++ +    +    +       +F   + + +A++I IP+G +IG         
Sbjct: 3   LLLEALQWLFSPERLEGSNPIPLRLEEHLFYTFISVALAALIAIPLGFFIGHTGKGRDFA 62

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              +    A P+      +V  +            L  +      IL    AG  A    
Sbjct: 63  VGLSGAARALPSFGLILFLVLLIGVAQAQLQFAAILAFVLLAIPSILAGAYAGVEAVDRR 122

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A +  +T W+    + +P   P  + G   +       + ++     G       G
Sbjct: 123 VIDAARAVGMTEWQILWKVEVPIGLPLLIGGLRASTLQVVATATLAAYVGLG-------G 175

Query: 539 LGAYIAESTEKGSFPEVV 556
           LG YI        + E++
Sbjct: 176 LGIYIFRGLPLQRYDEML 193


>gi|325288322|ref|YP_004264503.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324963723|gb|ADY54502.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 307

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYP 128
           ++LLF+   +  AA        R    VL P+++I   IP +  G++  +V+  F+  Y 
Sbjct: 91  LALLFSAPLSVAAAVFMTEISPRIGNKVLQPVIEIFVGIPSVVYGWVGLSVIVPFVRNYF 150

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                + LA    +    +  +T     S   +P D +E S +   + WQ    + +P +
Sbjct: 151 SGHGFSVLAGGLVLAIMILPTITSVAADSFKRLPNDYKEASLALGATRWQTISKVLLPAA 210

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            PG++  +++ ++  +   +A +M++     IP
Sbjct: 211 FPGILTGIVLGLARAFGEALAVQMVIGNSIAIP 243



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI-SSKIQPFAQLLAAFPANVFF 434
           ++++I    ++   ++    ++    +         P I +  +QP  ++    P+ V+ 
Sbjct: 79  LIFIIGSVAVSSLALLFSAPLSVAAAV---FMTEISPRIGNKVLQPVIEIFVGIPSVVYG 135

Query: 435 PLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFH 487
            + +S +       +     ++    L++       + +V A      PND+KE + +  
Sbjct: 136 WVGLSVIVPFVRNYFSGHGFSVLAGGLVLAIMILPTITSVAADSFKRLPNDYKEASLALG 195

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            T W+    ++LP  FP  +TG +     A+  ++  ++     I +  +
Sbjct: 196 ATRWQTISKVLLPAAFPGILTGIVLGLARAFGEALAVQMVIGNSIAIPGS 245


>gi|298676098|ref|YP_003727848.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298289086|gb|ADI75052.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 214

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 15/199 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL             A+ IS +   V       + +L   ++ IL+I ++ P +  L   
Sbjct: 16  SLTMRTIEHLYMFSIALFISSVIGVVLGITIYYNSKLSNPVLNILNIFETTPDIALLVIL 75

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +               L  I A     +  +T + Y  L  + R    ++R+  LS  + 
Sbjct: 76  LPIAGMG--------TLPTIIASILYSLLPITRNTYTGLKGVDRKYINIARALGLSSREI 127

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            + + +P S+P +   + +++      V    +I  G     L          I+  ++ 
Sbjct: 128 LFKIRIPMSLPLIAGGIRIALVFTMGLVTLGGLIAAGGLGTTL-------QTGIQLYEVN 180

Query: 240 AILYAMLTMLGVIFLYDQL 258
            IL A +    +  + D  
Sbjct: 181 TILLAGIWTGLLAVILDGF 199



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 4/128 (3%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   + + I+S+I + +GI I +   +S+ +     +    P      +++       L
Sbjct: 25  LYMFSIALFISSVIGVVLGITIYYNSKLSNPVLNILNIFETTPDIALLVILLPIAGMGTL 84

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  +  I  +   I  N   G       +  +A +  ++       I +P   P  
Sbjct: 85  ----PTIIASILYSLLPITRNTYTGLKGVDRKYINIARALGLSSREILFKIRIPMSLPLI 140

Query: 507 VTGAITAC 514
             G   A 
Sbjct: 141 AGGIRIAL 148


>gi|90961378|ref|YP_535294.1| phosphate ABC transporter permease [Lactobacillus salivarius
           UCC118]
 gi|301300067|ref|ZP_07206286.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90820572|gb|ABD99211.1| Phosphate transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|300214247|gb|ADJ78663.1| Phosphate transport system permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300852330|gb|EFK79995.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 305

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 86/221 (38%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF--- 115
           A    L      +++ +F   +A   A       S+++  +L  +++++  IP + +   
Sbjct: 82  ALPMILGSFGVTLLAAIFVTPFAIGTALYITELASKKMKKILQIVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   V +    + G   G    A+   F   +  +T     SL  +P+     S +   
Sbjct: 142 GLNVVVPFIRENFGGTGYGILAGAVVL-FVMILPTVTSLTVDSLKAVPKHYRSASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  +++ +  +  G++  ++  M+  +   +A +M++                 T +
Sbjct: 201 TPWQTMFHVTLKAATSGILTAIVFGMARAFGEALAVQMVIGNASLMPTSLLNPASTLTSV 260

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +   +    L ++   +L M  +  L  +L+ R
Sbjct: 261 LTMGIGNTVMGTVGNNALWSLALVLLAMSLIFNLIVRLIGR 301



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 71/217 (32%), Gaps = 21/217 (9%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF----FP 435
           + LG   +  +  + +    I   + I       +   +Q   +LL   P+ V+      
Sbjct: 85  MILGSFGVTLLAAIFVTPFAIGTALYITELASKKMKKILQIVIELLVGIPSVVYGFIGLN 144

Query: 436 LVVSCVS--YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWR 492
           +VV  +   +      +    +++F      + +  +    A P  ++  + +   T W+
Sbjct: 145 VVVPFIRENFGGTGYGILAGAVVLFVMILPTVTSLTVDSLKAVPKHYRSASLALGATPWQ 204

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------------G 538
              ++ L       +T  +     A+  ++  ++       + T+              G
Sbjct: 205 TMFHVTLKAATSGILTAIVFGMARAFGEALAVQMVIGNASLMPTSLLNPASTLTSVLTMG 264

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +G  +  +    +   + L +L M      + R +  
Sbjct: 265 IGNTVMGTVGNNALWSLALVLLAMSLIFNLIVRLIGR 301


>gi|317128023|ref|YP_004094305.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472971|gb|ADU29574.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 295

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 100/260 (38%), Gaps = 30/260 (11%)

Query: 22  LLAFVLVIGIINILLHGIQ-----------ETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++   ++ GI+ I+L  ++           +  +P  I++ +   +   +L  Y   T  
Sbjct: 47  MIVLPVIAGILFIVLWELRFFHTIFQLETYQLPLPSAILEALLANMS--TLISYTGYTLT 104

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             +  M++     F+ A +A    + G   + ++  + ++PI+       ++F +    +
Sbjct: 105 EAVVGMLLGSSLGFIVALVATAWPKWGKGSLTVVASLNAVPIVALAPIMNLWFGSGIGSR 164

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +      AI  I T     M  + Y+ + N+     ++  S+  + ++ F +L +  S+P
Sbjct: 165 I------AIVTIMTMAA--MAINAYKGMNNVHPFALDLMHSYAATKFEIFKFLRIFNSLP 216

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            +   + ++ +      +  E            G+G  ++ +IK   +      ++    
Sbjct: 217 YVFTALKINATASMIGAIVGEFF------FSSRGLGYLLSNSIKIGRMPLGWACIIMAAI 270

Query: 251 VIFLYDQLLFR---PMIVWS 267
              L+  ++ R     + W 
Sbjct: 271 AGILFYFIVERLEKVFLKWH 290



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 11/205 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  +I     T+   VV +++ S +   V +     P            L A P   
Sbjct: 89  LANMSTLISYTGYTLTEAVVGMLLGSSLGFIVALVATAWPKWGKGSLTVVASLNAVPIVA 148

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++         +    ++++ +      +  N   G +       ++  S+  T + 
Sbjct: 149 LAPIMNLWFGSGIGSRIAIVTIMTMAA----MAINAYKGMNNVHPFALDLMHSYAATKFE 204

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            ++++ +    PY  T        +   +IV E          + GLG  ++ S + G  
Sbjct: 205 IFKFLRIFNSLPYVFTALKINATASMIGAIVGEFF------FSSRGLGYLLSNSIKIGRM 258

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPL 577
           P +    +IM      L  F+   L
Sbjct: 259 P-LGWACIIMAAIAGILFYFIVERL 282


>gi|213163482|ref|ZP_03349192.1| binding-protein-dependent transport systems inner membrane
           component [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
          Length = 149

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 58/137 (42%), Gaps = 3/137 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIPSIALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F  +  G  +   L A+ A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLIGHGIGV---LPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLV 193
           WQ+  ++ +P ++P + 
Sbjct: 127 WQRLRWVEIPMALPVIF 143



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 57/139 (41%), Gaps = 1/139 (0%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+   +  Y+  L    ++ V + + +A II +P+G+ I     +++ +   A LL   P
Sbjct: 5   HYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKWLATPVLGAATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S       +  ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYV 507
           T W+  R++ +P   P   
Sbjct: 125 TFWQRLRWVEIPMALPVIF 143


>gi|258444723|ref|ZP_05693052.1| phosphate ABC transporter [Staphylococcus aureus A8115]
 gi|282892879|ref|ZP_06301114.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A8117]
 gi|257850216|gb|EEV74169.1| phosphate ABC transporter [Staphylococcus aureus A8115]
 gi|282764876|gb|EFC05001.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A8117]
          Length = 305

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 11/207 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           + L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+
Sbjct: 41  FGLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIIL 100

Query: 401 WIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNL 450
            I   I++         +  ++     LA  P+ VF  L  +              N  L
Sbjct: 101 GIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSIL 160

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG 
Sbjct: 161 AAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGF 220

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTT 537
           I +   A   +    +     I L T 
Sbjct: 221 ILSLSRALGETAPLVLIGIPTILLATP 247


>gi|34499848|ref|NP_904063.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34105698|gb|AAQ62052.1| probable ABC transporter, permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 379

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 12/205 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF- 115
           D  +  Q   R    +  +++ + L        A +  R+G  L P+L+ +Q+IP L   
Sbjct: 167 DPDAFRQALVRHLQLVGLSVLPAALLGAALGLAAFRLPRVGAWLFPLLNTLQTIPSLALF 226

Query: 116 --LTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
             L   + +   L+P   I       A+ A+    +  MT     +L  +P    + +R 
Sbjct: 227 ALLIAPLAWLGRLWPQSGIAGVGLAPAVTALTLYSLLPMTHGTLAALRQVPAAARDSARG 286

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
             +S  Q    + +P ++P L+  + ++        V +  +     +I   G G+ +  
Sbjct: 287 IGMSPRQILLQVELPLALPVLITGLRVT-------TVQAVGLAAVAALIGAGGFGAILFQ 339

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYD 256
            +       +L  +L ++ +    D
Sbjct: 340 GLSASAPDQVLLGVLPIVLLTLCCD 364



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 16/171 (9%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVS---CVSYYHLNPNLWLSLL------MIFGTQW 462
           P + + + P    L   P+   F L+++    +        +    L      +   +  
Sbjct: 204 PRVGAWLFPLLNTLQTIPSLALFALLIAPLAWLGRLWPQSGIAGVGLAPAVTALTLYSLL 263

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    +A     P   ++ A    ++  +    + LP   P  +TG           ++
Sbjct: 264 PMTHGTLAALRQVPAAARDSARGIGMSPRQILLQVELPLALPVLITGLRVT-------TV 316

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   +     +   G GA + +     +  +V+LGVL +    L  +   
Sbjct: 317 QAVGLAAVAALIGAGGFGAILFQGLSASAPDQVLLGVLPIVLLTLCCDAVF 367


>gi|30018892|ref|NP_830523.1| phosphate ABC transporter permease [Bacillus cereus ATCC 14579]
 gi|29894434|gb|AAP07724.1| Phosphate transport system permease protein pstC [Bacillus cereus
           ATCC 14579]
          Length = 297

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWTHALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWTHALWTLAMILLVISF 282


>gi|325288323|ref|YP_004264504.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324963724|gb|ADY54503.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 302

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +LV+    I  HG +   +       V +       PQ    +   +L +M+I++ 
Sbjct: 24  CVVLLLVLFTGYIFYHGRERLNLHFLTSSPVFMQTGGGIAPQ-LFNSLYLVLLSMIITIP 82

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A   K  RL   +   ++ + S+P +    F ++ F+NL          A 
Sbjct: 83  VGLAAGIYMAEYAKQNRLTRAIRFSIEALASLPSIVIGLFGLLVFVNLTGWGYTLMSGAL 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             +I    V  +T     ++ N+P  ++E S +   + WQ    + +P ++PGL+  +++
Sbjct: 143 AVSILNIPV--ITRLSEDAIRNVPSAIKEASLALGATHWQTIVRVVLPAALPGLITGIII 200

Query: 199 SMSGGW 204
           +    +
Sbjct: 201 TAGRAF 206



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 11/182 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGI 406
             ++      I +     +  HF     +++   G I   +F  + L++++ II IPVG+
Sbjct: 26  VLLLVLFTGYIFYHGRERLNLHFLTSSPVFMQTGGGIAPQLFNSLYLVLLSMIITIPVGL 85

Query: 407 WIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
             G      +K     + +  +  A    P +V+                 ++ G     
Sbjct: 86  AAGIYMAEYAKQNRLTRAIRFSIEALASLPSIVIGLFGLLVFVNLTGWGYTLMSGALAVS 145

Query: 465 LFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           + N+              P+  KE + +   T W+    ++LP   P  +TG I   G A
Sbjct: 146 ILNIPVITRLSEDAIRNVPSAIKEASLALGATHWQTIVRVVLPAALPGLITGIIITAGRA 205

Query: 518 WN 519
           + 
Sbjct: 206 FG 207


>gi|317491253|ref|ZP_07949689.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920800|gb|EFV42123.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 87/258 (33%), Gaps = 22/258 (8%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +      L+ G++ ++        + R    + P               T+  ++ + IS
Sbjct: 10  WRWYRDPLLWGVLLLIGLNSGMPHMGRLFSALFPDLTRPVYQQDSFWSLTIAHVTLVGIS 69

Query: 80  LLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            L   V    A         R    ++  +  + Q+ P +  L   V             
Sbjct: 70  SLIAVVLGVSAGLLVTHRVGREFRSLVETVTAVGQTFPPVAVLAVAVPLMG--------F 121

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +   A+ A+    +  +       + ++P  + E +R   +S WQ  W   +P + P ++
Sbjct: 122 SPEPAVIALVLYGLLPILQGTISGIESVPAAVRETARGAGMSRWQILWRAEIPLAAPVIL 181

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  S+        A+    VG        +GS I + +   +   ++   L +  +  
Sbjct: 182 AGVRTSVII--NIGTAAIASTVGVKT-----LGSPIIIGLSGFNTAYVIQGALLVALLAM 234

Query: 254 LYDQLLFRPMIVWSNKFR 271
           + D  +F   + +  ++R
Sbjct: 235 ITD-AVFERWVSYLTRWR 251



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 81/241 (33%), Gaps = 19/241 (7%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV--VVLIIIAS 398
            +  D   + V+  + +      +G + +         V          +  V L+ I+S
Sbjct: 11  RWYRDPLLWGVLLLIGLNSGMPHMGRLFSALFPDLTRPVYQQDSFWSLTIAHVTLVGISS 70

Query: 399 IIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           +I + +G+  G            S ++    +   FP      + V  + +   +P   +
Sbjct: 71  LIAVVLGVSAGLLVTHRVGREFRSLVETVTAVGQTFPPVAVLAVAVPLMGF---SPEPAV 127

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+++G    IL   I+G  + P   +E A    ++ W+      +P   P  + G  T
Sbjct: 128 IALVLYG-LLPILQGTISGIESVPAAVRETARGAGMSRWQILWRAEIPLAAPVILAGVRT 186

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +       + ++              LG+ I       +   V+ G L++    +  +  
Sbjct: 187 SVIINIGTAAIASTVGVKT-------LGSPIIIGLSGFNTAYVIQGALLVALLAMITDAV 239

Query: 573 L 573
            
Sbjct: 240 F 240


>gi|194099228|ref|YP_002002319.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|193934518|gb|ACF30342.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
          Length = 229

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 GYVISSVGVAVATGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               ++ ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 187 LTGYVISSVGVAVATGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|91789476|ref|YP_550428.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91698701|gb|ABE45530.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 383

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL--------TF 118
           R    ++ A+  +L        LA +  R+   L P+L+I+Q+IP +             
Sbjct: 172 RHIQIVMMAVAFTLCIGLPLGWLAGQKNRIAGALFPLLNIIQTIPSIALFGLLMAPLALL 231

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
              +      G        A+ A+    +  +  +    L  +P  + + +    ++ +Q
Sbjct: 232 AAAWPALARAGISGVGLAPAVIALTLYGLLPVVRATVAGLEAVPSGVIDAATGMGMTRFQ 291

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  +  P ++P ++  +  +       ++ +  +     +I   G+G+ +   +     
Sbjct: 292 IFGRIEFPLALPVVLGGVRTA-------IIQAVGLAAVTALIGAGGLGAIMFEGLFSSAQ 344

Query: 239 LAILYAMLTMLGVIFLYD 256
             +L  ++ ++ +  L D
Sbjct: 345 DLVLLGVVPIIALGVLAD 362



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 78/196 (39%), Gaps = 19/196 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP- 448
           V++ +     I +P+G   G +  I+  + P   ++   P+   F L+++ ++       
Sbjct: 177 VMMAVAFTLCIGLPLGWLAGQKNRIAGALFPLLNIIQTIPSIALFGLLMAPLALLAAAWP 236

Query: 449 --------NLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                    + L+  +I  T +    ++   +AG  A P+   + A+   +T ++ +  I
Sbjct: 237 ALARAGISGVGLAPAVIALTLYGLLPVVRATVAGLEAVPSGVIDAATGMGMTRFQIFGRI 296

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P   P  + G  TA   A   + V+ +   G       GLGA + E     +   V+L
Sbjct: 297 EFPLALPVVLGGVRTAIIQAVGLAAVTALIGAG-------GLGAIMFEGLFSSAQDLVLL 349

Query: 558 GVLIMCCFVLALNRFL 573
           GV+ +    +  +   
Sbjct: 350 GVVPIIALGVLADVAF 365


>gi|312870581|ref|ZP_07730696.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311093896|gb|EFQ52225.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 204

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 17/202 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + +  L +LS++ I+L+   V   L  + R     LV    ++ SIP   F       F 
Sbjct: 5   SQQHALMVLSSLGIALVLALVITLLFLRRRNWLNSLVYFFSLLYSIPSFAF-------FA 57

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P   +G   A I     ++   +  S   +L  I   L EV+    ++  Q F+ + 
Sbjct: 58  LLLPLSGLGMRTAIIVLTIYAEYV-LLRSFITALQEIDPQLIEVATGMGMTRQQVFYKVQ 116

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + ++++        +  I  G       G+G  +   ++ Q L  IL+ 
Sbjct: 117 LPLALPAIFSGLQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQQLAPILWG 169

Query: 245 MLTMLGVIFLYDQLLFRPMIVW 266
               + +  +    L   ++ W
Sbjct: 170 TFLTMALTLVCAGFL--RLLEW 189



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + IA ++ + + +    R +  + +  F  LL + P+  FF L++           
Sbjct: 12  VLSSLGIALVLALVITLLFLRRRNWLNSLVYFFSLLYSIPSFAFFALLLPLSGLGMRT-- 69

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +++    ++ +L + I           EVA+   +T  + +  + LP   P   +G
Sbjct: 70  --AIIVLTIYAEYVLLRSFITALQEIDPQLIEVATGMGMTRQQVFYKVQLPLALPAIFSG 127

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   + G       GLG  + E  +      ++ G  +     L  
Sbjct: 128 LQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQQLAPILWGTFLTMALTLVC 180

Query: 570 NRFL 573
             FL
Sbjct: 181 AGFL 184


>gi|269127836|ref|YP_003301206.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268312794|gb|ACY99168.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 229

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 16/207 (7%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK------IQPFA 422
               +     +       ++  ++   I  +I +P G+ +G      +       +   A
Sbjct: 13  QPEQWSGPDGIPTRVLEHLWYSLLGFAITVLIALPAGLVLGHVRRGRAAALVGLLVTASA 72

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               A P      L V   S   L P   L  L+       +L N   G        ++ 
Sbjct: 73  NAARALPTLGLLVLAVILTSGGDLVP--ILVPLVAL-AVPPVLVNAYTGVRQVEPRLRDA 129

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    + G +    + LP   P  + G  TA     + + ++     G       GLG Y
Sbjct: 130 AEGMGMRGRQVLLQVELPVALPLILLGMRTAMIQIVSTATIAAYVGLG-------GLGRY 182

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I +   +  +  +  G +++    +A+
Sbjct: 183 IVDGYARQEYASMAGGAILVIALAVAV 209



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 69/220 (31%), Gaps = 20/220 (9%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM------V 99
           R+             +P          L    I++L       +    RR         +
Sbjct: 8   REWFTQPEQWSGPDGIPTRVLEHLWYSLLGFAITVLIALPAGLVLGHVRRGRAAALVGLL 67

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           +    +  +++P LG L   V+           G  +  +  +    V  +  + Y  + 
Sbjct: 68  VTASANAARALPTLGLLVLAVIL-------TSGGDLVPILVPLVALAVPPVLVNAYTGVR 120

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +   L + +    + G Q    + +P ++P ++  M  +M         +  + +G   
Sbjct: 121 QVEPRLRDAAEGMGMRGRQVLLQVELPVALPLILLGMRTAMIQIVSTATIAAYVGLG--- 177

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G YI      Q+  ++    + ++ +      + 
Sbjct: 178 ----GLGRYIVDGYARQEYASMAGGAILVIALAVAVQFVF 213


>gi|227893630|ref|ZP_04011435.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
 gi|227864490|gb|EEJ71911.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
          Length = 213

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 76/195 (38%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                  +L+A++++ L   V   +  + +     L+    ++ S+P   F       F 
Sbjct: 16  MIEHAQMVLTALLLAFLVAIVLIAVFLRKKNWMNSLIYFFSLLYSVPSYAF-------FA 68

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P   +G   A +   F S+   +  +    +  +  +  EV++   +     F  + 
Sbjct: 69  LLIPVTGLGKTTAILVLAFYSEYV-LLRNFITGIREVDPNYIEVAKGLGMDNNDIFIKVQ 127

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + ++++        +  I  G       G+G  +   ++  +++ IL+ 
Sbjct: 128 LPLALPAIFSGLQIALASTMAIATIASTISAG-------GLGDLLFEGLQTGNVIPILWG 180

Query: 245 MLTMLGVIFLYDQLL 259
            +  + +  ++  +L
Sbjct: 181 TILTVVLTLIFALIL 195



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 70/180 (38%), Gaps = 11/180 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  +++A ++ I +      + +  + +  F  LL + P+  FF L++           
Sbjct: 23  VLTALLLAFLVAIVLIAVFLRKKNWMNSLIYFFSLLYSVPSYAFFALLIPVTGLGKTT-- 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               L++ F +++ +L N I G      ++ EVA    +     +  + LP   P   +G
Sbjct: 81  --AILVLAFYSEYVLLRNFITGIREVDPNYIEVAKGLGMDNNDIFIKVQLPLALPAIFSG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   S G       GLG  + E  + G+   ++ G ++     L  
Sbjct: 139 LQIALASTMAIATIASTISAG-------GLGDLLFEGLQTGNVIPILWGTILTVVLTLIF 191


>gi|190893121|ref|YP_001979663.1| nitrate/sulfonate ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190698400|gb|ACE92485.1| probable nitrate/sulfonate ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
          Length = 375

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 89/269 (33%), Gaps = 15/269 (5%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G ++  FF  L        R +  +    P       + Q +   +   W  ++   A  
Sbjct: 87  GMATRAFFLLLFACWLLAWRCVTELSKQQPVTAFGKSALQLLIPAIFGAWILILWEAATR 146

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFR------VVVLIIIASIIWIPVGIWIGFRP 412
            A      +         +           R      V++  II  +    V +      
Sbjct: 147 GAGIPFIILPPPSAIGARIMASLPILGDDVRQTIFKAVLIGYIIGCLSGFIVAVLADRVA 206

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   +++A P     P++V    +   +     + ++I  T + +L N +AG 
Sbjct: 207 FLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSK----AAVVIIMTFFPMLVNTVAGL 262

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A  +  +++  ++  + W+    + LP   P+           A   +IV+E      +
Sbjct: 263 AASGSMERDLMRTYASSDWQTLLKLKLPAAMPFIFNALKINSTLALIGAIVAEFFGTPIV 322

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                G+G  I+    + +   V   + +
Sbjct: 323 -----GMGFRISTEIGRMNVDMVWAEIAV 346



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 18/244 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF     +L                 P  I   +  +L +  L     +T  + 
Sbjct: 126 QLLIPAIFGAWILILWEAATRGAGIPFIILPPPSAIGARIMASLPI--LGDDVRQTIFKA 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   +I  L  F+ A LA +   L   L+PI +++ ++PI+G     V++F   +P K 
Sbjct: 184 VLIGYIIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++  S WQ    L +P +MP 
Sbjct: 244 A--------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLLKLKLPAAMPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY--AMLTML 249
           +   + ++ +      + +E         P+ G+G  I+  I   ++  +    A+  M 
Sbjct: 296 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVDMVWAEIAVAAMA 350

Query: 250 GVIF 253
           G IF
Sbjct: 351 GSIF 354


>gi|159043921|ref|YP_001532715.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911681|gb|ABV93114.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 305

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 80/237 (33%), Gaps = 9/237 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A           L    +  V      +        SL  +A  T    L    I    
Sbjct: 63  FAIPATWAQERPRLPAPHQVAVELWETTVEKRITSKRSLIYHAWITLSATLLGFAIGSAA 122

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + A     +R + M ++P     Q+IPIL      +V   ++    ++   + + +  
Sbjct: 123 GVLLAVGILYNRAMDMSVMPWAIASQTIPILAIAPMIIVVLNSVGVQGLLPKAMISAYLS 182

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +   M + L +      ++ R++  S  Q FW L +P SMP    ++ ++ + 
Sbjct: 183 F----FPVVVGMVKGLRSPDAMQLDLLRTYNASPSQGFWLLRLPASMPYFFTSLKIAAAA 238

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +  E+         + G+G+ +         + I  A+     +  +   ++
Sbjct: 239 SLVGAIVGEL-----PTGAVAGLGARLLAGSYYGQTIQIWSALFGAAILAAVLVGII 290



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 81/201 (40%), Gaps = 8/201 (3%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+   IT+   ++   I S   + + + I +   +   + P+A      P     P++
Sbjct: 100 SLIYHAWITLSATLLGFAIGSAAGVLLAVGILYNRAMDMSVMPWAIASQTIPILAIAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   L  +++  + + + ++  ++ G  +      ++  +++ +  + +  +
Sbjct: 160 IVVLNSVGVQGLLPKAMISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYNASPSQGFWLL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-- 555
            LP   PY+ T    A   +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 220 RLPASMPYFFTSLKIAAAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIWS 274

Query: 556 -VLGVLIMCCFVLALNRFLWH 575
            + G  I+   ++ +   +  
Sbjct: 275 ALFGAAILAAVLVGIIGLIQR 295


>gi|146342221|ref|YP_001207269.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146195027|emb|CAL79052.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 283

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 14/218 (6%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P  I   +       SL +    T L  L    +      +       SR +  V+ P 
Sbjct: 66  SPSAIFKFLSQMAYDGSLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSRVVEPF 125

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +  + SIPI+      +++F      KV  + L+ +     +         Y+    +  
Sbjct: 126 VIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSVVIVALVTS--------YKGATGVDP 177

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D   + R+   S +Q F  L VP S+  +   + +++       +  E +   +      
Sbjct: 178 DQINLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSE------ 231

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G+G  I  A     +  +  A++  + +  +    + +
Sbjct: 232 GLGHAIFKAGSLYIIPKVFAALVATIALALVLTFAVGK 269



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 12/261 (4%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           LS+      R    +R        QL          +           +  +  +I   +
Sbjct: 15  LSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAAAFMFGSPSAIFKFL 74

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   Y   L+      +T    ++   + +     +G+ + +   +S  ++PF   L + 
Sbjct: 75  SQMAYDGSLW--RDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSRVVEPFVIALGSI 132

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P+++       ++     +L ++       L     GA+    D   +  +   
Sbjct: 133 PIIALAPIIIIWFGTGLISKVAMSTLSVVIVA----LVTSYKGATGVDPDQINLLRTLGA 188

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           + ++ +R +++P        G     G A   +IV E  S       + GLG  I ++  
Sbjct: 189 SKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMS------SSEGLGHAIFKAGS 242

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
               P+V   ++      L L
Sbjct: 243 LYIIPKVFAALVATIALALVL 263


>gi|15924377|ref|NP_371911.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926967|ref|NP_374500.1| hypothetical protein SA1219 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651887|ref|YP_186274.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160734|ref|YP_493978.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88195113|ref|YP_499913.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267875|ref|YP_001246818.1| phosphate ABC transporter, inner membrane subunit PstA
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150393939|ref|YP_001316614.1| phosphate ABC transporter inner membrane subunit PstA
           [Staphylococcus aureus subsp. aureus JH1]
 gi|151221510|ref|YP_001332332.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156979706|ref|YP_001441965.1| hypothetical protein SAHV_1375 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509553|ref|YP_001575212.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221140588|ref|ZP_03565081.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253317020|ref|ZP_04840233.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|253733365|ref|ZP_04867530.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006176|ref|ZP_05144777.2| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257795558|ref|ZP_05644537.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9781]
 gi|258413366|ref|ZP_05681642.1| ABC phosphate transporter ATP-binding protein [Staphylococcus
           aureus A9763]
 gi|258420527|ref|ZP_05683469.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9719]
 gi|258434701|ref|ZP_05688775.1| phosphate ABC transporter [Staphylococcus aureus A9299]
 gi|258447442|ref|ZP_05695586.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A6300]
 gi|258449283|ref|ZP_05697386.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A6224]
 gi|258451784|ref|ZP_05699808.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A5948]
 gi|258454663|ref|ZP_05702627.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A5937]
 gi|262049856|ref|ZP_06022719.1| hypothetical protein SAD30_0585 [Staphylococcus aureus D30]
 gi|262052197|ref|ZP_06024404.1| hypothetical protein SA930_0547 [Staphylococcus aureus 930918-3]
 gi|269203009|ref|YP_003282278.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282926209|ref|ZP_06333843.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9765]
 gi|282928947|ref|ZP_06336536.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A10102]
 gi|284024388|ref|ZP_06378786.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus 132]
 gi|294848392|ref|ZP_06789139.1| phosphate ABC transporter [Staphylococcus aureus A9754]
 gi|295406332|ref|ZP_06816139.1| phosphate ABC transporter [Staphylococcus aureus A8819]
 gi|296276663|ref|ZP_06859170.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297244561|ref|ZP_06928444.1| phosphate ABC transporter [Staphylococcus aureus A8796]
 gi|304381037|ref|ZP_07363691.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|13701184|dbj|BAB42479.1| SA1219 [Staphylococcus aureus subsp. aureus N315]
 gi|14247158|dbj|BAB57549.1| similar to phosphate ABC transporter [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|57286073|gb|AAW38167.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126708|gb|ABD21222.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202671|gb|ABD30481.1| phosphate ABC transporter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740944|gb|ABQ49242.1| phosphate ABC transporter, inner membrane subunit PstA
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946391|gb|ABR52327.1| phosphate ABC transporter, inner membrane subunit PstA
           [Staphylococcus aureus subsp. aureus JH1]
 gi|150374310|dbj|BAF67570.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156721841|dbj|BAF78258.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368362|gb|ABX29333.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253728633|gb|EES97362.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789530|gb|EEV27870.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9781]
 gi|257839930|gb|EEV64398.1| ABC phosphate transporter ATP-binding protein [Staphylococcus
           aureus A9763]
 gi|257843475|gb|EEV67882.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9719]
 gi|257849062|gb|EEV73044.1| phosphate ABC transporter [Staphylococcus aureus A9299]
 gi|257853633|gb|EEV76592.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A6300]
 gi|257857271|gb|EEV80169.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A6224]
 gi|257860615|gb|EEV83439.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A5948]
 gi|257863046|gb|EEV85810.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A5937]
 gi|259159941|gb|EEW44978.1| hypothetical protein SA930_0547 [Staphylococcus aureus 930918-3]
 gi|259162080|gb|EEW46659.1| hypothetical protein SAD30_0585 [Staphylococcus aureus D30]
 gi|262075299|gb|ACY11272.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269940883|emb|CBI49265.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282589456|gb|EFB94546.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A10102]
 gi|282592273|gb|EFB97291.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9765]
 gi|285817065|gb|ADC37552.1| Phosphate transport system permease protein PstA [Staphylococcus
           aureus 04-02981]
 gi|294825192|gb|EFG41614.1| phosphate ABC transporter [Staphylococcus aureus A9754]
 gi|294968920|gb|EFG44942.1| phosphate ABC transporter [Staphylococcus aureus A8819]
 gi|297178591|gb|EFH37837.1| phosphate ABC transporter [Staphylococcus aureus A8796]
 gi|302751217|gb|ADL65394.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340346|gb|EFM06286.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312829782|emb|CBX34624.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315131193|gb|EFT87177.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196353|gb|EFU26705.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140282|gb|EFW32140.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320143946|gb|EFW35718.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|329314063|gb|AEB88476.1| Phosphate ABC transporter, inner membrane subunit PstA
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329727410|gb|EGG63866.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329728712|gb|EGG65139.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus 21189]
 gi|329728914|gb|EGG65332.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 305

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|302544363|ref|ZP_07296705.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302461981|gb|EFL25074.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 225

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +     L+++ I L+  F  A LA + + +   ++ +  I+ ++P L   + 
Sbjct: 23  QELTDATLQHVGITLASVAIGLVIAFPLALLARRRQGVAGPVLGMTTILYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          ++   +  +    +  +  ++   L ++P D  E +R       +
Sbjct: 83  LLPVFGV--------SQAVVVTGLVLYSLTILVRNIMAGLASVPEDAREAARGMGYGPLR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P L+  + ++            +I  G       G+G+ I   +     
Sbjct: 135 LLLGVELPLALPALMAGLRITTVSTVSLTTVGAIIGYG-------GLGNLIYEGMHSFFK 187

Query: 239 LAILYAML---TMLGVIFLYDQLLFRPMIVWSNKFR 271
             +L A +    +  V  L    + R +  W+ K R
Sbjct: 188 AQVLTASVLCVALAVVADLLLLGVQRVLTPWARKRR 223



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + I  +I  P+ +    R  ++  +     +L   P+   F L++            
Sbjct: 37  LASVAIGLVIAFPLALLARRRQGVAGPVLGMTTILYTVPSLAMFSLLLPVFGVSQAVVVT 96

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      ++ N++AG ++ P D +E A        R    + LP   P  + G 
Sbjct: 97  GLVLYSLTI----LVRNIMAGLASVPEDAREAARGMGYGPLRLLLGVELPLALPALMAGL 152

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                   + + V  +  +G       GLG  I E
Sbjct: 153 RITTVSTVSLTTVGAIIGYG-------GLGNLIYE 180


>gi|13476946|ref|NP_108516.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027709|dbj|BAB54302.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 249

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  E  +     +  P+  +  SL          +L A V + +     A L  +    
Sbjct: 24  PGWFEPLLKPLTENNAPVIYNQGSLLTLTLLHLRTVLIATVAATIVAVALAILVTRPAGA 83

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +   +++I Q+ P +  L   V              E   + A+F   +  +  + 
Sbjct: 84  EFLPLSRSLVNIGQTFPPVAVLALAVPAVG--------FGEKPTLIALFLYGLLPIFENA 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +P ++ E +R   ++GWQ+   + +P S P ++  + +S       VV S    
Sbjct: 136 LTGLTTLPTNVVEAARGAGMTGWQRLTKVELPLSAPIILGGIRLS-------VVISLATA 188

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-IFLYDQL 258
              + +    +G  I   +   +L  IL   L +  + + +YD L
Sbjct: 189 TIGSTVAAKTLGEVIIAGLLSNNLAFILQGGLIVAALAVLIYDGL 233



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           +  + A+I+ + + I +  RP  +  +   +    +   FP      L V  V +     
Sbjct: 61  IATVAATIVAVALAILV-TRPAGAEFLPLSRSLVNIGQTFPPVAVLALAVPAVGFGEKPT 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L L  +      I  N + G +  P +  E A    +TGW+    + LP   P  + 
Sbjct: 120 LIALFLYGLL----PIFENALTGLTTLPTNVVEAARGAGMTGWQRLTKVELPLSAPIILG 175

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +        ++S   +     +    LG  I       +   ++ G LI+    + 
Sbjct: 176 GIRLS-------VVISLATATIGSTVAAKTLGEVIIAGLLSNNLAFILQGGLIVAALAVL 228

Query: 569 L 569
           +
Sbjct: 229 I 229


>gi|251811862|ref|ZP_04826335.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875150|ref|ZP_06284023.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|251804659|gb|EES57316.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295915|gb|EFA88436.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
          Length = 231

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK RRL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYRRLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYRRLSWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|240113440|ref|ZP_04727930.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           MS11]
 gi|254494226|ref|ZP_05107397.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268599513|ref|ZP_06133680.1| ABC transporter [Neisseria gonorrhoeae MS11]
 gi|226513266|gb|EEH62611.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268583644|gb|EEZ48320.1| ABC transporter [Neisseria gonorrhoeae MS11]
          Length = 229

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 GYVISSVGVAVATGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 86/222 (38%), Gaps = 19/222 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 193 SSVGVAVATGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|255305922|ref|ZP_05350094.1| ABC transporter, permease protein [Clostridium difficile ATCC
           43255]
          Length = 242

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 15/201 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +M R     ++A I  I + I         + ++P   L  + P  +   L +     
Sbjct: 51  LYSMGRCFFSFLLAMIFAIILSIVSYLNRFFRNLLKPINALTRSIPTMILVVLALIWFE- 109

Query: 444 YHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      ++ F   + IL+ NV+        +  E+A+ + I        I LP I
Sbjct: 110 -----KDSTPFIVGFTIVFPILYDNVLGAILNIDKNLLEMANVYKIRFIDKVLKIYLPAI 164

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
               ++  ++    +   +I  EV         T G+G  I       +   +   ++I+
Sbjct: 165 KFQIISILVSTFSLSLKVAIAGEV-----YSQPTYGIGTMIQTEKINFNTSGIFAWIIIV 219

Query: 563 CCFVLAL---NRFLWHPLYLY 580
                 L    +FL    +L+
Sbjct: 220 LLISAILQIAQKFLARRAFLW 240



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 96/248 (38%), Gaps = 17/248 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  + +  II + +           + + +   +   S       +  R   + +++++
Sbjct: 7   CVILLFLWQIIALKIDNDIFLPTVGQVFNSIKEIMLNSSFYIDILYSMGRCFFSFLLAMI 66

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F  + + ++  +R    +L PI  + +SIP +  +   +++F       ++G        
Sbjct: 67  FAIILSIVSYLNRFFRNLLKPINALTRSIPTMILVVLALIWFEKDSTPFIVG-------- 118

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            FT     +  ++  ++ NI ++L E++  +++    K   + +P     ++  ++ + S
Sbjct: 119 -FTIVFPILYDNVLGAILNIDKNLLEMANVYKIRFIDKVLKIYLPAIKFQIISILVSTFS 177

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQL 258
                 +A E+        P  GIG+ I       +   I   ++ +L +  +     + 
Sbjct: 178 LSLKVAIAGEVYS-----QPTYGIGTMIQTEKINFNTSGIFAWIIIVLLISAILQIAQKF 232

Query: 259 LFRPMIVW 266
           L R   +W
Sbjct: 233 LARRAFLW 240


>gi|260219641|emb|CBA26486.1| Putative osmoprotectant uptake system permease protein yehY
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 416

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 74/193 (38%), Gaps = 15/193 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            R    +L A+  ++      A   +++R L   L P+L+++Q+IP +      +     
Sbjct: 157 MRHLQIVLLAIAPAVTIGVPLAWRMSRARGLRETLFPVLNVIQTIPSIALFGLLMAPLGW 216

Query: 126 LYP--------GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           L          G        A+ A+    +  +  S    L  +P      +R+  ++  
Sbjct: 217 LAAQAPALGRLGISGVGLAPAVLALLLYALLPIVRSALAGLGQVPEATVTAARAMGMTPR 276

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W++ +P ++P L+  +  +       VV +  +     ++   G+GS +   +    
Sbjct: 277 QVLWHVELPLALPVLLIGLRTA-------VVQTTGLAAVTALVGAGGLGSIMFDGLFSAA 329

Query: 238 LLAILYAMLTMLG 250
              ++  ++ ++ 
Sbjct: 330 NELVMLGVIPIVL 342



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 19/190 (10%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V++ I  A  I +P+   +     +   + P   ++   P+   F L+++ + +   
Sbjct: 160 LQIVLLAIAPAVTIGVPLAWRMSRARGLRETLFPVLNVIQTIPSIALFGLLMAPLGWLAA 219

Query: 447 NPNLW------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              L ++      I+ + +AG    P      A +  +T  +  
Sbjct: 220 QAPALGRLGISGVGLAPAVLALLLYALLPIVRSALAGLGQVPEATVTAARAMGMTPRQVL 279

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++ LP   P  + G  TA        + +   +     +   GLG+ + +     +   
Sbjct: 280 WHVELPLALPVLLIGLRTA-------VVQTTGLAAVTALVGAGGLGSIMFDGLFSAANEL 332

Query: 555 VVLGVLIMCC 564
           V+LGV+ +  
Sbjct: 333 VMLGVIPIVL 342


>gi|238788797|ref|ZP_04632588.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           frederiksenii ATCC 33641]
 gi|238723102|gb|EEQ14751.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           frederiksenii ATCC 33641]
          Length = 232

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 17/196 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
               L +  + VI++           +   +    V+  ++ + Q+ P +  L   V   
Sbjct: 30  IAHVLLVFISSVIAIFIGVSAGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVM 89

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                     +E  AI A+    +  +       + ++ RD+ EV++   +S  Q  W +
Sbjct: 90  G--------FSEKPAIIALVLYGLLPILQGSITGIESVSRDIREVAQGVGMSTRQILWRV 141

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P +V  +  S+        A+    VG        +GS I + +   +   ++ 
Sbjct: 142 ELPLAAPVIVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQ 194

Query: 244 AMLTMLGVIFLYDQLL 259
               +  +  + D + 
Sbjct: 195 GAAVVALLAIITDMIF 210



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 17/189 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           V+L+ I+S+I I +G+  G            S ++    +   FP      + V  + + 
Sbjct: 33  VLLVFISSVIAIFIGVSAGIAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFS 92

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + L L  +      IL   I G  +   D +EVA    ++  +    + LP   P
Sbjct: 93  EKPAIIALVLYGLL----PILQGSITGIESVSRDIREVAQGVGMSTRQILWRVELPLAAP 148

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V G  T+       + ++         + T  LG+ I       +   V+ G  ++  
Sbjct: 149 VIVAGIRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAAVVAL 201

Query: 565 FVLALNRFL 573
             +  +   
Sbjct: 202 LAIITDMIF 210


>gi|300088007|ref|YP_003758529.1| binding-protein-dependent transporter inner membrane component
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527740|gb|ADJ26208.1| binding-protein-dependent transport systems inner membrane
           component [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 262

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 85/242 (35%), Gaps = 17/242 (7%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L   +++  + +         +     +   +     SL Q        +  +  ++
Sbjct: 8   WTALGVGIIVFAVVLANPDWWSGLLAAMFPEQRQVLYTRSSLSQLTLEHLGLVGLSSGLT 67

Query: 80  LLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +L          +   L    ++  +L + Q+ P +  L   V                 
Sbjct: 68  VLLGLPLGIWVTRRSGLDFQPIVTNLLSVGQTFPPVAVLALAVPVLGFGL--------EP 119

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +FA+F   +  +  +    +  +P    + +R   +S +Q  + + +P S   ++  + 
Sbjct: 120 TVFALFLYGLLPVVRNTIAGINAVPAAAVDAARGLGMSRFQVLFRVELPLSARVILAGIR 179

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S       V+ +    +   VI   G+G+ +   + + ++  IL  ++    +  + D+
Sbjct: 180 IS-------VIINIGTAMIGAVIGAGGLGAPVVAGLAQDNVAYILQGVVPAAVLAVIVDR 232

Query: 258 LL 259
           +L
Sbjct: 233 VL 234



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 19/251 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I +  V+          +  +            +  L    +  V +   +  ++ +
Sbjct: 13  VGIIVFAVVLANPDWWSGLLAAMFPEQRQVLYTRSSLSQLTLEHLGLVGLSSGLTVLLGL 72

Query: 403 PVGIWIGFRPHISSKIQPFA----QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           P+GIW+  R  +    QP       +   FP      L V  + +        L L  + 
Sbjct: 73  PLGIWVTRRSGLD--FQPIVTNLLSVGQTFPPVAVLALAVPVLGFGLEPTVFALFLYGLL 130

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                ++ N IAG +A P    + A    ++ ++    + LP      + G   +     
Sbjct: 131 ----PVVRNTIAGINAVPAAAVDAARGLGMSRFQVLFRVELPLSARVILAGIRISVIINI 186

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHP 576
             +++  V   G       GLGA +     + +   ++ GV+      + ++R L     
Sbjct: 187 GTAMIGAVIGAG-------GLGAPVVAGLAQDNVAYILQGVVPAAVLAVIVDRVLSGIEN 239

Query: 577 LYLYGTRCLRL 587
           LY YG R   L
Sbjct: 240 LYEYGPRRSEL 250


>gi|320010529|gb|ADW05379.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 284

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS---IGYIVNHFTYQDVLYVIWLGC 384
           P       + +     L +    +   +     W S   +  I  +    D++ V W   
Sbjct: 32  PSPRQAAPARRITWKKLVLVPAVLTVVLVATYLWISNVELDSIAKNSLAGDIVEVRWWQH 91

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           + +  +    ++  II IP+GI +  R     +  +   A +  A PA     L+V  + 
Sbjct: 92  VKLTAISTFWVL--IIAIPLGIAMTRRGLKKAAPGVTTLANIGQATPAIGLLALLVIWLG 149

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  + + +  +      +  N +AG +A      E +    ++       + LP  
Sbjct: 150 IGPSTAIIGMVIYAVL----PVFSNTVAGLNAIEPTLVEASRGIGMSALGTLTKVELPLA 205

Query: 503 FPYYVTGAITAC 514
            P  + G  TA 
Sbjct: 206 VPLILAGVRTAL 217



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 10/184 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                  VLV  ++ ++L          ++  I   +L    +     +       +   
Sbjct: 42  RITWKKLVLVPAVLTVVLVATYLWISNVELDSIAKNSLAGDIVEVRWWQHVKLTAISTFW 101

Query: 79  SLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            L+          +   ++    +  + +I Q+ P +G L   V++        +IG  +
Sbjct: 102 VLIIAIPLGIAMTRRGLKKAAPGVTTLANIGQATPAIGLLALLVIWLGIGPSTAIIGMVI 161

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+  +F+        +    L  I   L E SR   +S       + +P ++P ++  +
Sbjct: 162 YAVLPVFS--------NTVAGLNAIEPTLVEASRGIGMSALGTLTKVELPLAVPLILAGV 213

Query: 197 MMSM 200
             ++
Sbjct: 214 RTAL 217


>gi|258544130|ref|ZP_05704364.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520638|gb|EEV89497.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 267

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 81/260 (31%), Gaps = 10/260 (3%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             + +   +    +       +     W      +   +                     
Sbjct: 11  RPLPWRISDYLWGIFPALASLFAAVALWQYGHAHLGAMLIPAPDVVFARAVNILANASER 70

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T++R  + I +A  I I  G+  G    +S   +P   +L   P  ++  L +  
Sbjct: 71  QNVILTLYRASIGISLALTIGISAGLIAGSSRTLSLLTRPIITVLLGTPPIIWVVLAIFW 130

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +    +    +   +   T   +           P    E+ SS+ +   R  +   LP
Sbjct: 131 YNMGSTS----VIFTVTITTLPLVFAAAQMSVMTLPTPLSEMLSSYRVPLARRLKAFYLP 186

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            I    +   I A G     ++++E+           G+G+ I  +       +V+  V+
Sbjct: 187 HILRQLLPALIVAVGTGLKITVMAELLG------SNDGIGSAIGSARAMLDTVDVMAYVV 240

Query: 561 IMCCFVLALNRFLWHPLYLY 580
           ++   ++++   L  PL   
Sbjct: 241 LIVTIIMSIEYGLLEPLRRL 260



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 95/247 (38%), Gaps = 19/247 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRMLSAM 76
             A   +   + +  +G             V     V+ L   + R     T  R    +
Sbjct: 25  FPALASLFAAVALWQYGHAHLGAMLIPAPDVVFARAVNILANASERQNVILTLYRASIGI 84

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            ++L        +A  SR L ++  PI+ ++   P + ++   + ++             
Sbjct: 85  SLALTIGISAGLIAGSSRTLSLLTRPIITVLLGTPPIIWVVLAIFWYNMG--------ST 136

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           + IF +  + +  +  +   S+  +P  L E+  S+R+   ++     +P  +  L+  +
Sbjct: 137 SVIFTVTITTLPLVFAAAQMSVMTLPTPLSEMLSSYRVPLARRLKAFYLPHILRQLLPAL 196

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           ++++  G    V +E++   D      GIGS I  A    D + ++  ++ ++ +I   +
Sbjct: 197 IVAVGTGLKITVMAELLGSND------GIGSAIGSARAMLDTVDVMAYVVLIVTIIMSIE 250

Query: 257 QLLFRPM 263
             L  P+
Sbjct: 251 YGLLEPL 257


>gi|297182135|gb|ADI18307.1| ABC-type sugar transport system, permease component [uncultured
           Rhodobacterales bacterium HF4000_03E16]
          Length = 389

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 2/207 (0%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++ +Y   T    + ++V+    T +   +  +    G  L+ +  +       GF   
Sbjct: 177 ANMGRYFFNTLFVTVGSVVLVTFATSLMGYILGRFEFPGRTLLFVATVSTVFVPQGFTII 236

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V   ++          L    +     ++ + F+ Y S   +P++LEE +R   +S WQ
Sbjct: 237 PVFELLSAMGLSTGLLGLTLATSGNAIVIFVVLFAGYFS--QLPKELEEAARVEGVSQWQ 294

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FWY+ +P + P +V  ++M +   W   +   +I + +  I    +G Y     +  D 
Sbjct: 295 IFWYVMLPLAKPMVVTVLIMQVLNAWNDFLLPLVITLANPAIRTLSVGIYAFKGEQTIDW 354

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
             +  A    +  + L   LL R  I 
Sbjct: 355 TGMAAAATISIIPVVLLFILLQRYFIN 381



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 39/280 (13%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML-DIFWFCVVCGV 355
           +I    W   + L +N +       +      EN+ +  +   +     +  +  V   V
Sbjct: 136 WIYPFVWMLATSLKSNTEIFGNPGLIPESWAWENYARAWTEANMGRYFFNTLFVTVGSVV 195

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +  A   +GYI+  F +               R ++ +   S +++P G  I       
Sbjct: 196 LVTFATSLMGYILGRFEFPG-------------RTLLFVATVSTVFVPQGFTI------- 235

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               P  +LL+                    + N  +  +++F   +          S  
Sbjct: 236 ---IPVFELLS-----AMGLSTGLLGLTLATSGNAIVIFVVLFAGYF----------SQL 277

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P + +E A    ++ W+ + Y++LP   P  VT  I     AWN  ++  V +  +  +R
Sbjct: 278 PKELEEAARVEGVSQWQIFWYVMLPLAKPMVVTVLIMQVLNAWNDFLLPLVITLANPAIR 337

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           T  +G Y  +  +   +  +     I    V+ L   L  
Sbjct: 338 TLSVGIYAFKGEQTIDWTGMAAAATISIIPVVLLFILLQR 377


>gi|302333000|gb|ADL23193.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 305

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|27378426|ref|NP_769955.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351574|dbj|BAC48580.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 271

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 93/248 (37%), Gaps = 17/248 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA   VI   ++ L GI+   +PR    ++ I     +      RT    L        F
Sbjct: 35  LAIAAVIWEGSVQLFGIRPYYLPRLSTILMAIAATPRAYVDGFLRTLAETLIGFASGGAF 94

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   +  + R L  ++ PI  + Q+IP++ F    V++F N          LA     
Sbjct: 95  GVLMGVVFFRIRALREMVFPIFVVSQTIPVIAFGALVVLWFGNTL--------LAKAIIA 146

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +T +    L  +      +  SF  S  Q    L +P ++P +   + ++ S 
Sbjct: 147 FYLTFFPVTVNTLLGLETVDPKQVALMHSFGASNRQLLLRLQLPTALPQIFVALRLAASL 206

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI---FLYDQLL 259
                +  E            G+G  +  A+  ++++AI  A+L    +    +     +
Sbjct: 207 SLVGAIVGEWFG------DTTGLGVLLLQAMFTENVVAIWAALLAAALLGTGFYAVVAAV 260

Query: 260 FRPMIVWS 267
            R ++ WS
Sbjct: 261 ERRLVFWS 268



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 66/229 (28%), Gaps = 10/229 (4%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             +   R   P +  +L        +  + W   V    I   +      +         
Sbjct: 12  SWVAAQRIAMPASLRKLVRLLLGLAIAAVIWEGSVQLFGIRPYYLPRLSTILMAIAATPR 71

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
             +     T+   ++         + +G+       +   + P   +    P   F  LV
Sbjct: 72  AYVDGFLRTLAETLIGFASGGAFGVLMGVVFFRIRALREMVFPIFVVSQTIPVIAFGALV 131

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V        N  L  +++  + T + +  N + G          +  SF  +  +    +
Sbjct: 132 VLWFG----NTLLAKAIIAFYLTFFPVTVNTLLGLETVDPKQVALMHSFGASNRQLLLRL 187

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            LP   P        A   +   +IV E          TTGLG  + ++
Sbjct: 188 QLPTALPQIFVALRLAASLSLVGAIVGEWFG------DTTGLGVLLLQA 230


>gi|309379602|emb|CBX21773.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 265

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A    +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAAAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 102/250 (40%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            + + V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGGFMLPEPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L        +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++ + G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAAAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|229120363|ref|ZP_04249613.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           95/8201]
 gi|228663173|gb|EEL18763.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           95/8201]
          Length = 297

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|159037251|ref|YP_001536504.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157916086|gb|ABV97513.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 261

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 17/231 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            ++ ++L G        D+ DI   +L+   L + A           V+ +        L
Sbjct: 32  AVLTVVLLGTYLWVRSADLDDIERRSLNADYLLRTAGEHVTLTALTTVLVVAIAGGGGIL 91

Query: 90  AAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             +   R L      + +I Q+ P +G L    ++    +   +IG    ++  +     
Sbjct: 92  LTRRSMRWLAPFATGLANIGQATPAIGLLVLLSIFLGIGFSTALIGLVAYSVLPVLQ--- 148

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                +    +  + R L E  R   +S +     + +P ++P ++  +  +       +
Sbjct: 149 -----NTIVGINQVDRHLIEAGRGIGMSPFTVLVRIELPLAVPVILAGVRTA-------L 196

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V +  +    T I   G+G+ I   IK Q    ++   +    +    D L
Sbjct: 197 VLAVGVATLATFIDAGGLGAMIVTGIKLQRETVLVTGAVLTATLALTLDWL 247



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 72/242 (29%), Gaps = 19/242 (7%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +     R    +      V+ G  + +    +  I       D L       +T+     
Sbjct: 19  RWRGLLRRHLAMPAVLTVVLLGTYLWVRSADLDDIERRSLNADYLLRTAGEHVTL----T 74

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNP 448
            +    ++ I  G  I         + PFA  LA      PA     L+   +       
Sbjct: 75  ALTTVLVVAIAGGGGILLTRRSMRWLAPFATGLANIGQATPAIGLLVLLSIFLGIGFSTA 134

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L    +      +L N I G +       E      ++ +     I LP   P  + 
Sbjct: 135 LIGLVAYSVL----PVLQNTIVGINQVDRHLIEAGRGIGMSPFTVLVRIELPLAVPVILA 190

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  TA   A   + ++         +   GLGA I    +      +V G ++     L 
Sbjct: 191 GVRTALVLAVGVATLA-------TFIDAGGLGAMIVTGIKLQRETVLVTGAVLTATLALT 243

Query: 569 LN 570
           L+
Sbjct: 244 LD 245


>gi|84686013|ref|ZP_01013909.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Maritimibacter alkaliphilus HTCC2654]
 gi|84666106|gb|EAQ12580.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacterales bacterium HTCC2654]
          Length = 283

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF---- 388
           +L   + V   + + +   +  V  G+       +V      D+   +     T++    
Sbjct: 27  RLAKYRAVRIGVPVIFGITILVVWQGLVRGLNVPLVILPAPSDIWLRMTQSVPTLWEDFV 86

Query: 389 -----RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
                  +   +I     +   I I     +   + P    +AA P     P++V    +
Sbjct: 87  QTFVKGALSGYVIGCGAAVLTAILIDRSKFLQQGLLPVGNFIAALPIVGTAPILVMWFGF 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    + +++ F     +L N + G +A     +++ S++  +  +    + LP   
Sbjct: 147 DWQSKAAVVVVMVFF----PMLVNTVEGLAATTRMQRDLMSTYSASYAQTLIKLRLPAAM 202

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P+   G       A   +IV+E            G+G  I+    +     V   + +  
Sbjct: 203 PFIFNGLKITTTLALIGAIVAEFFGSPIK-----GMGFRISTEVGRLRLDMVWAEIAVAA 257

Query: 564 CFVLAL 569
                 
Sbjct: 258 IAGSVF 263



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 96/236 (40%), Gaps = 17/236 (7%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSA 75
           P IF +   V+  G++  L   +     P DI   +  +  V +L +   +T ++  LS 
Sbjct: 39  PVIFGITILVVWQGLVRGLNVPLVILPAPSDIWLRMTQS--VPTLWEDFVQTFVKGALSG 96

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            VI      + A L  +S+ L   L+P+ + + ++PI+G     V++F   +  K     
Sbjct: 97  YVIGCGAAVLTAILIDRSKFLQQGLLPVGNFIAALPIVGTAPILVMWFGFDWQSKAAVVV 156

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +   F         M  +  + L    R   ++  ++  S  Q    L +P +MP +   
Sbjct: 157 VMVFF--------PMLVNTVEGLAATTRMQRDLMSTYSASYAQTLIKLRLPAAMPFIFNG 208

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           + ++ +      + +E         P+ G+G  I+  +    L  +++A + +  +
Sbjct: 209 LKITTTLALIGAIVAEFFGS-----PIKGMGFRISTEVGRLRLD-MVWAEIAVAAI 258


>gi|331696826|ref|YP_004333065.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951515|gb|AEA25212.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 280

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 21/264 (7%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
             T  V R   PE      +  R      +    VV  +     W    + V        
Sbjct: 5   LSTPAVRRPAAPEPPRDAATPSRGRLRRVLPALVVVAVLVAAWQWAVTAFAVRPQVLPSP 64

Query: 377 LYVIWLGCI-----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           L V+  G +           T+    V   ++  +   + + + F P +   + P     
Sbjct: 65  LRVVEQGWLFRDALWTNTVPTLQVTAVGFAVSLAVAWVLAVVVDFSPWLRQALLPLLVAS 124

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
              P     PL++    +  L       +++   T + +   +I G S+   +   +  S
Sbjct: 125 QTIPIIAIAPLLIIWFGFGLL----PKVVVIALVTFFPVAIGLIEGFSSVEREATNLVRS 180

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                WR +RY+ LP   P + T        A   ++ +E            GLG ++  
Sbjct: 181 MGAGRWREFRYLRLPAAMPSFFTSLRIGITYAVTGAVFAEYVG------ARAGLGIFMNL 234

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
                    V+  V+I     +AL
Sbjct: 235 QKNSFRTDLVLAAVIITAVISVAL 258



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            +    ++   +P  +  +    L   +L      T         +SL   +V A +   
Sbjct: 50  AVTAFAVRPQVLPSPLRVVEQGWLFRDALWTNTVPTLQVTAVGFAVSLAVAWVLAVVVDF 109

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-NLYPGKVIGAELAAIFAIFTSQVWNMT 151
           S  L   L+P+L   Q+IPI+      +++F   L P          +  I     + + 
Sbjct: 110 SPWLRQALLPLLVASQTIPIIAIAPLLIIWFGFGLLPK---------VVVIALVTFFPVA 160

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
             + +   ++ R+   + RS     W++F YL +P +MP    ++ + ++      V +E
Sbjct: 161 IGLIEGFSSVEREATNLVRSMGAGRWREFRYLRLPAAMPSFFTSLRIGITYAVTGAVFAE 220

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +          G+G ++ L         +L A++    +    
Sbjct: 221 YVG------ARAGLGIFMNLQKNSFRTDLVLAAVIITAVISVAL 258


>gi|327398902|ref|YP_004339771.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327181531|gb|AEA33712.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 346

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            ++++ + + +F    LA K R+    +  IL+I Q+IP +      ++    L     +
Sbjct: 144 FASVLAASIISFPLGVLAYKKRKTTQKIFAILNIFQTIPSIAMFGALILPLAYLSKHSRV 203

Query: 133 GAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            + +         A  A+    +  +  ++Y  L N+P D ++ S    ++G Q  + + 
Sbjct: 204 LSSMGISGIGFAPAFIALVVYAMLPLVRNIYSGLRNVPEDAKQASMGMGMNGIQLLFMVE 263

Query: 185 VPFSMPGLVWNMMMSM 200
           +P ++  ++  + +S+
Sbjct: 264 IPLAIVEILTGLKISL 279



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 13/192 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ ASII  P+G+    +   + KI     +    P+   F  ++  ++Y   +  +
Sbjct: 144 FASVLAASIISFPLGVLAYKKRKTTQKIFAILNIFQTIPSIAMFGALILPLAYLSKHSRV 203

Query: 451 WLS------------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             S            + ++      ++ N+ +G    P D K+ +    + G +    + 
Sbjct: 204 LSSMGISGIGFAPAFIALVVYAMLPLVRNIYSGLRNVPEDAKQASMGMGMNGIQLLFMVE 263

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +P      +TG   +      NA++ + + + G       GLG   +     G  P V +
Sbjct: 264 IPLAIVEILTGLKISLVQTIGNAALAALIGAGGLGVFIFQGLGEASSSLIMLGVLPLVFI 323

Query: 558 GVLIMCCFVLAL 569
            +       + +
Sbjct: 324 AITAEYIMNVII 335


>gi|296130632|ref|YP_003637882.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296022447|gb|ADG75683.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 288

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 79/233 (33%), Gaps = 16/233 (6%)

Query: 343 MLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVL-YVIWLGCITMFRVVVLIII 396
           ++ + W  ++  + +         Q   ++V      +    V+ L  +T+    +  + 
Sbjct: 44  LVLVAWTALLAALDVSPYVGKGPAQVWEFLVTDADAGENRTEVLDLLGVTLTDAAIGFVT 103

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
                + +   I         I P A L  + P     P++V  V     +  +   +++
Sbjct: 104 GMTAAVLLAAAIVLSRTAEGAIMPVAMLFRSVPLIALAPVIVLLVGRGVASVAVMSGIVV 163

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +F     I+     G  +     ++V +          R + LP   P        +  G
Sbjct: 164 LFPALVTIVL----GLRSASPQMRDVVTVLGGGPRTVLRLVQLPAALPSVFAAVRISVPG 219

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           A   ++++E  + G       G+G  +  +  +    +V   V+++    L L
Sbjct: 220 AITGALIAEWLATGG------GIGYGVVSAVGRAQNTKVWALVVVVTLASLVL 266



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 68/199 (34%), Gaps = 15/199 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T        V  +    + A     SR     ++P+  + +S+P++      V+      
Sbjct: 93  TLTDAAIGFVTGMTAAVLLAAAIVLSRTAEGAIMPVAMLFRSVPLIALAPVIVLLVGRGV 152

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + + +  +F    + V          L +    + +V              + +P 
Sbjct: 153 ASVAVMSGIVVLFPALVTIV--------LGLRSASPQMRDVVTVLGGGPRTVLRLVQLPA 204

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +   + +S+ G     + +E +  G       GIG  +  A+       + +A++ 
Sbjct: 205 ALPSVFAAVRISVPGAITGALIAEWLATGG------GIGYGVVSAVGRAQNTKV-WALVV 257

Query: 248 MLGVIFLYDQLLFRPMIVW 266
           ++ +  L    L + +  W
Sbjct: 258 VVTLASLVLYTLAQLLEQW 276


>gi|241760345|ref|ZP_04758440.1| abcb protein [Neisseria flavescens SK114]
 gi|241319223|gb|EER55701.1| abcb protein [Neisseria flavescens SK114]
          Length = 265

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A    +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 102/250 (40%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L        +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|16263252|ref|NP_436045.1| putative ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307304429|ref|ZP_07584180.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|14523925|gb|AAK65457.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|306902631|gb|EFN33225.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 251

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 96/256 (37%), Gaps = 27/256 (10%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P    +R       L+  +++ G + +L              +I+  + D+  L     +
Sbjct: 7   PAAPQQRRRIETAPLIVLIVLAGTVALLWWSGM-------AEEILAYSDDISYL---TVQ 56

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               +  A  +++L       + ++   R +   ++ + +I  ++P L  L  ++     
Sbjct: 57  HLELVAWAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLGI 116

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     + A+F ++ + +  +  + Y  L  +P  L E +    ++  Q  W + +
Sbjct: 117 G--------TVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVEL 168

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  +   +  +++      V S  +V    +I   G+G  I   I   +L  ++   
Sbjct: 169 PNALFVIFGGIRTALAI----CVGSAPLV---FLIGAGGLGELIFTGISLDELPMMMAGA 221

Query: 246 LTMLGVIFLYDQLLFR 261
           +    +  L D ++ +
Sbjct: 222 IPTAMLAVLVDFIVGQ 237



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 72/236 (30%), Gaps = 13/236 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +V  V  G         +          + +L    +  V     +A ++ +PVGI + 
Sbjct: 21  LIVLIVLAGTVALLWWSGMAEEILAYSDDISYLTVQHLELVAWAGGLAILVAVPVGIVLS 80

Query: 410 F--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                 +S  +     + +  P      L ++ +        +     +   T   I+ N
Sbjct: 81  RPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLGIG----TVPAVFGLWAATLLPIVRN 136

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             AG  A P    E A+   +T  +    + LP        G  TA      ++ +  + 
Sbjct: 137 TYAGLRAVPPHLVEAATGMGMTPRQVLWRVELPNALFVIFGGIRTALAICVGSAPLVFLI 196

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             G       GLG  I         P ++ G +      + ++  +    Y    R
Sbjct: 197 GAG-------GLGELIFTGISLDELPMMMAGAIPTAMLAVLVDFIVGQIQYYLVPR 245


>gi|309777128|ref|ZP_07672091.1| ABC transporter, permease protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914998|gb|EFP60775.1| ABC transporter, permease protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 247

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 10/187 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T+   V  ++IA+++ + + I +         I P   +    P  V  PL    + 
Sbjct: 48  SLVTLQEAVAGLLIATLLAVVIAIGMDVSQIFKHSIFPHLVVTQTVPVMVLGPLFSIWLG 107

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +          L++IF   + ++                +  SF    W+ + Y+ +P  
Sbjct: 108 FG----MAPKILMVIFMCFFPVVIAFCDALGKVDEHQISLLKSFGAKKWQIYAYVKIPAA 163

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                +G   A       +IV E  S       + GLG Y+          +V   V+++
Sbjct: 164 STALFSGLKVAATYCIGGAIVGEWLS------ASAGLGYYMIRVKNGYMLDKVFACVVVI 217

Query: 563 CCFVLAL 569
               L L
Sbjct: 218 IALSLLL 224



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 85/239 (35%), Gaps = 17/239 (7%)

Query: 18  NIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
            +F LL  + V  G + I    +     P  IV  +    +V  L  ++  T    ++ +
Sbjct: 2   PLFTLLLVLAVWEGCVRIFAIDLYILPAPSKIVQALFANREV--LWMHSLVTLQEAVAGL 59

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +I+ L   V A     S+     + P L + Q++P++       ++       K      
Sbjct: 60  LIATLLAVVIAIGMDVSQIFKHSIFPHLVVTQTVPVMVLGPLFSIWLGFGMAPK------ 113

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I  +     + +  +   +L  +      + +SF    WQ + Y+ +P +   L   +
Sbjct: 114 --ILMVIFMCFFPVVIAFCDALGKVDEHQISLLKSFGAKKWQIYAYVKIPAASTALFSGL 171

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            ++ +      +  E +          G+G Y+        L  +   ++ ++ +  L 
Sbjct: 172 KVAATYCIGGAIVGEWLSASA------GLGYYMIRVKNGYMLDKVFACVVVIIALSLLL 224


>gi|298694683|gb|ADI97905.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           subsp. aureus ED133]
 gi|323441172|gb|EGA98879.1| phosphate ABC transporter permease [Staphylococcus aureus O11]
 gi|323444041|gb|EGB01652.1| phosphate ABC transporter permease [Staphylococcus aureus O46]
          Length = 305

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|227505880|ref|ZP_03935929.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium striatum
           ATCC 6940]
 gi|227197508|gb|EEI77556.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Corynebacterium striatum
           ATCC 6940]
          Length = 225

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
             ++  +I +   +     +       +   +  + IA+++ +P+G+ +G      + + 
Sbjct: 4   LLEAFSFIADGANWSGANGLGQRLLAHLGYTLAAVTIAAVVALPLGVLMGHTRRGVNGVV 63

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             +  L A P+      +    S+    P +   + ++      +L   + G  A P   
Sbjct: 64  AVSGALRALPSLGLLTWLTLEFSFGVRIPVIPAIVTLVILAIPPMLAGTVTGVMAIPRGV 123

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A +   +     R + LP   P  V G  +A   A      + + +    ++  +GL
Sbjct: 124 VDSARAAGFSESDIVRQVELPLAAPSIVGGIRSA---AVQVLATATIVA----YIGLSGL 176

Query: 540 GAYIAESTEKGSFPEVVLG 558
           G Y+ +      +P++++G
Sbjct: 177 GRYLIDGLALRDYPQMLVG 195



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 11/202 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
            + L Q         L+A+ I+ +       L   +RR    +V +   ++++P LG L 
Sbjct: 20  ANGLGQRLLAHLGYTLAAVTIAAVVALPLGVLMGHTRRGVNGVVAVSGALRALPSLGLL- 78

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
               +    +   V    + AI  +    +  M       +  IPR + + +R+   S  
Sbjct: 79  ---TWLTLEFSFGVRIPVIPAIVTLVILAIPPMLAGTVTGVMAIPRGVVDSARAAGFSES 135

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +P + P +V  +    S     +  + ++      I L G+G Y+   +  +D
Sbjct: 136 DIVRQVELPLAAPSIVGGIR---SAAVQVLATATIVA----YIGLSGLGRYLIDGLALRD 188

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +L   L +  +    D +L
Sbjct: 189 YPQMLVGALMVALLALAVDGVL 210


>gi|212638253|ref|YP_002314773.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Anoxybacillus flavithermus WK1]
 gi|212559733|gb|ACJ32788.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Anoxybacillus flavithermus WK1]
          Length = 268

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +   +    +A +     R+  +  P L I+ ++P +      +V         V   
Sbjct: 87  GFIAGTMIGVCFAAILWWFPRISHIADPYLVILNAMPKVALGPILIVALGPNMTSIVAMG 146

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + +I              +Y S   +  +  +V R+F  +  Q F    +P S P ++ 
Sbjct: 147 AIISIIITTIV--------VYTSFKEVDANYIKVLRTFGATKRQWFTEAILPASFPTIIS 198

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + +++   W  V+  E +V         G+G  I    +  +   +L ++L +  +  +
Sbjct: 199 TLKVNVGLSWVGVIVGEFLV------SKQGLGYMIIYGFQVFNFTLVLLSLLMIALLSSI 252

Query: 255 YDQLL 259
             QL+
Sbjct: 253 MYQLV 257



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 10/163 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             I  ++I +     + + P IS    P+  +L A P     P+++  +     +     
Sbjct: 87  GFIAGTMIGVCFAAILWWFPRISHIADPYLVILNAMPKVALGPILIVALGPNMTSIVAMG 146

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +++ I  T   +  +          ++ +V  +F  T  +W+   ILP  FP  ++    
Sbjct: 147 AIISIIITTIVVYTSF----KEVDANYIKVLRTFGATKRQWFTEAILPASFPTIISTLKV 202

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             G +W   IV E        +   GLG  I    +  +F  V
Sbjct: 203 NVGLSWVGVIVGEFL------VSKQGLGYMIIYGFQVFNFTLV 239


>gi|217958300|ref|YP_002336848.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH187]
 gi|217065237|gb|ACJ79487.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH187]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAVSR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 188 GLGSTKWQAVSRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|149204741|ref|ZP_01881705.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149141850|gb|EDM29902.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 191

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 69/188 (36%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++  + I+ + +      +AK  RL   ++ +  I+ +IP L      +  F        
Sbjct: 4   LIVPITIAFVISLAVGIYSAKKPRLYSFIMIVTGILFAIPSLALFALFIPIFGIG----- 58

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               + AI  +    +  M  ++     N+P ++ + +       W++ + + +P ++P 
Sbjct: 59  ---TIPAIIGLAAYSLMIMIRNIATGFQNLPPEVIDAAHGMGYGRWRRIYEIELPLALPF 115

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + ++        V    I      I   G+G+ I   + ++    IL        +
Sbjct: 116 IIAGLRIA-------SVTVIGIATIAAYINAGGLGTIIFEGLDQRYPEKILVGGALTSAL 168

Query: 252 IFLYDQLL 259
               D  L
Sbjct: 169 ALSVDFSL 176



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           M+ ++V I IA +I + VGI+   +P + S I     +L A P+   F L +       +
Sbjct: 1   MYLLIVPITIAFVISLAVGIYSAKKPRLYSFIMIVTGILFAIPSLALFALFIPIFGIGTI 60

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+   +      ++ N+  G    P +  + A       WR    I LP   P+ 
Sbjct: 61  PAIIGLAAYSLMI----MIRNIATGFQNLPPEVIDAAHGMGYGRWRRIYEIELPLALPFI 116

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A       + ++   + G       GLG  I E  ++    ++++G  +     
Sbjct: 117 IAGLRIASVTVIGIATIAAYINAG-------GLGTIIFEGLDQRYPEKILVGGALTSALA 169

Query: 567 LALN 570
           L+++
Sbjct: 170 LSVD 173


>gi|57865400|ref|YP_189584.1| amino acid ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|293367141|ref|ZP_06613812.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|57636058|gb|AAW52846.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|291318702|gb|EFE59077.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329734629|gb|EGG70940.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU045]
          Length = 231

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK +RL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|312870379|ref|ZP_07730504.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           oris PB013-T2-3]
 gi|311094080|gb|EFQ52399.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           oris PB013-T2-3]
          Length = 299

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 71/178 (39%), Gaps = 12/178 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP 111
                  A    +   +  +++ +     A ++A         R+   + P+++++  +P
Sbjct: 69  PSHHLYGALPMIVTSFAVTLLAGIVALPLALVSAVAITEMLPPRVNQFIQPVIELLVGVP 128

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    LT  V     L+ G   G  LAA   +F   +  MT     +L  +P+    
Sbjct: 129 SVVYGYVGLTVIVPRLGRLFGGTGFGI-LAATCVLFLMVLPTMTSMTIDNLRQVPKQYRL 187

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            S     + WQ    + +P +  G++  M+  M+  +   +A +M+ +G+  +   G+
Sbjct: 188 ASAGLGATRWQTITRVVIPSAKGGILTAMIFGMARAFGEALAVQMV-IGNAAVMPHGL 244



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 10/206 (4%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G ++G     + +  +H  Y  +  ++    +T+   +V + +A +  + +       P 
Sbjct: 55  GYSLGKFLSGVNWQPSHHLYGALPMIVTSFAVTLLAGIVALPLALVSAVAITEM--LPPR 112

Query: 414 ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF----- 466
           ++  IQP  +LL   P+ V+    L V       L       +L      + ++      
Sbjct: 113 VNQFIQPVIELLVGVPSVVYGYVGLTVIVPRLGRLFGGTGFGILAATCVLFLMVLPTMTS 172

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             I      P  ++  ++    T W+    +++P      +T  I     A+  ++  ++
Sbjct: 173 MTIDNLRQVPKQYRLASAGLGATRWQTITRVVIPSAKGGILTAMIFGMARAFGEALAVQM 232

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSF 552
              G+  +   GL +  A  T   + 
Sbjct: 233 V-IGNAAVMPHGLMSSAATLTSVLTT 257


>gi|42779862|ref|NP_977109.1| phosphate ABC transporter, permease protein, putative [Bacillus
           cereus ATCC 10987]
 gi|42735779|gb|AAS39717.1| phosphate ABC transporter, permease protein, putative [Bacillus
           cereus ATCC 10987]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|329735027|gb|EGG71324.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU028]
          Length = 231

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK +RL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|76808880|ref|YP_333528.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|76578333|gb|ABA47808.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
          Length = 807

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 9/183 (4%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA----- 137
                    +S  L   L+P+L+++Q+IP +      +     L     + A L      
Sbjct: 618 GVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIG 677

Query: 138 ---AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A+ A+F   +  +  S+      +P  + E + +  ++G ++   + +P ++P ++ 
Sbjct: 678 VAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRERLVAIELPLALPVVLS 737

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            + + +        VA+ +   G       GIG      +    L  I  A++T +    
Sbjct: 738 GVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEA 797

Query: 254 LYD 256
             D
Sbjct: 798 ATD 800



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL---------- 450
            +P+GI       +   + P   ++   P+   + L+++ ++       L          
Sbjct: 618 GVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIG 677

Query: 451 --WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                + +       I+ +V+ G +  P    E A +  +TG      I LP   P  ++
Sbjct: 678 VAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRERLVAIELPLALPVVLS 737

Query: 509 GAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G           + + + +   G       G+G    +    G+ P + L ++    F
Sbjct: 738 GVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALPTIALALVTAVLF 795


>gi|157147151|ref|YP_001454470.1| hypothetical protein CKO_02928 [Citrobacter koseri ATCC BAA-895]
 gi|157084356|gb|ABV14034.1| hypothetical protein CKO_02928 [Citrobacter koseri ATCC BAA-895]
          Length = 210

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 11/182 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + + IA II IP G+ I   P ++  I   A  L   P+      V+  +    L   + 
Sbjct: 29  LALSIALIIAIPTGVLIANIPRLAFIITSGASTLRTIPSLAILAAVMPFLGIGLLPSVVA 88

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L +L +      IL N      +   D    A    +T W+    I+LP   P  + G  
Sbjct: 89  LVVLAVPP----ILLNTCTSIQSVNPDTLSAAHGMGLTPWQVTGKIVLPLAAPGILAGCR 144

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           TA       + ++     G       GLG ++           +++G + +    +A+  
Sbjct: 145 TAAVQVVGGAALASFIGGG-------GLGDFVTTGIAIMDMSRLLVGAVPIILLAVAIEA 197

Query: 572 FL 573
             
Sbjct: 198 LF 199



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            Q   +  +    A+ I+L+       L A   RL  ++      +++IP L  L   + 
Sbjct: 17  WQAVWQHLMMCGLALSIALIIAIPTGVLIANIPRLAFIITSGASTLRTIPSLAILAAVMP 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +             L ++ A+    V  +  +   S+ ++  D    +    L+ WQ   
Sbjct: 77  FLGIGL--------LPSVVALVVLAVPPILLNTCTSIQSVNPDTLSAAHGMGLTPWQVTG 128

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + PG++     +          +  I  G       G+G ++   I   D+  +
Sbjct: 129 KIVLPLAAPGILAGCRTAAVQVVGGAALASFIGGG-------GLGDFVTTGIAIMDMSRL 181

Query: 242 LYAMLTMLGVIFLYDQLL 259
           L   + ++ +    + L 
Sbjct: 182 LVGAVPIILLAVAIEALF 199


>gi|298369161|ref|ZP_06980479.1| ABC transporter permease [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283164|gb|EFI24651.1| ABC transporter permease [Neisseria sp. oral taxon 014 str. F0314]
          Length = 265

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A    +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++ +L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVVLWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L        +A   +    +L P++ ++ ++P + ++   + +F    P     
Sbjct: 81  VGISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|160945390|ref|ZP_02092616.1| hypothetical protein FAEPRAM212_02912 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443121|gb|EDP20126.1| hypothetical protein FAEPRAM212_02912 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105425|emb|CBL02969.1| ABC-type spermidine/putrescine transport system, permease component
           I [Faecalibacterium prausnitzii SL3/3]
          Length = 271

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 104/257 (40%), Gaps = 22/257 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++    F  +    V+ +  ++ + + +      + ++  I+          +R+ L  
Sbjct: 6   KKLAYPYFVWMVLFTVVPLFIVVYYAMTDAEGNFTLNNLTSIS----GYGSVFARSLLLA 61

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILD--IMQSIPILGFLTF-----T 119
           L A VI L+  F      ++ R       L +V++P+    ++++   +G L+      T
Sbjct: 62  LIATVICLVIAFPVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSVNGPVNT 121

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F+ L P  ++    A +  +  + V  M   +Y S+  I + L E ++    +  + 
Sbjct: 122 LLGFIGLGPYTMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGANTTKT 181

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDL 238
              + +P S+PG+   + M         V S M+  G  ++    IG  I    +     
Sbjct: 182 LVRVLIPMSVPGISTGITMVFVPAVSTFVISRMLGGGSNLL----IGDLIEMQFLGNSYN 237

Query: 239 LAILYAMLTMLGVIFLY 255
           L +  AM  +L +I L 
Sbjct: 238 LNVGSAMSLVLMIIVLL 254



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 77/250 (30%), Gaps = 32/250 (12%)

Query: 347 FWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCI---TMFRVVVLIIIASIIWI 402
            W  +   V +  + + ++     +FT  ++  +   G +   ++   ++  +I  +I  
Sbjct: 14  VWMVLFTVVPLFIVVYYAMTDAEGNFTLNNLTSISGYGSVFARSLLLALIATVICLVIAF 73

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL--NPNLWLSLLMIFGT 460
           PVG ++         I     +L      ++   ++   ++  L        +LL   G 
Sbjct: 74  PVGYFLSRLRVNKQHIMLMLVML-----PMWMNFLLRTYAWMGLLSVNGPVNTLLGFIGL 128

Query: 461 QWYILFNVIAGA--------------------SAFPNDFKEVASSFHITGWRWWRYIILP 500
             Y + N                         +       E A        +    +++P
Sbjct: 129 GPYTMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGANTTKTLVRVLIP 188

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGSFPEVVLGV 559
              P   TG       A +  ++S +   G   L    +   ++  S        + L +
Sbjct: 189 MSVPGISTGITMVFVPAVSTFVISRMLGGGSNLLIGDLIEMQFLGNSYNLNVGSAMSLVL 248

Query: 560 LIMCCFVLAL 569
           +I+    ++ 
Sbjct: 249 MIIVLLCMSF 258


>gi|153005912|ref|YP_001380237.1| glycine betaine ABC transporter substrate-binding protein
           [Anaeromyxobacter sp. Fw109-5]
 gi|152029485|gb|ABS27253.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Anaeromyxobacter sp. Fw109-5]
          Length = 496

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 15/157 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +AA+   LG V++    ++Q++P L  L   +                 A+ A+F 
Sbjct: 317 PLGVVAARRPGLGRVVLGAAGVVQTVPSLALLVMLIPLLGIGARP--------AVAALFL 368

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  + +  L  I  +L E + +  LS   +   + +P + P ++  +  S     
Sbjct: 369 YGLLPIVRNTHAGLTGIALELRESAAALGLSPGARLRLVELPLATPAILAGVKTS----- 423

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
             V+      +G  ++   G G  I   ++   +  I
Sbjct: 424 -AVITVGTATLG-ALVGAGGYGQPILTGVRLASVPLI 458



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 4/130 (3%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G+    RP +   +   A ++   P+     L+V  +    +     ++ L ++G   
Sbjct: 317 PLGVVAARRPGLGRVVLGAAGVVQTVPSLA---LLVMLIPLLGIGARPAVAALFLYG-LL 372

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ N  AG +    + +E A++  ++     R + LP   P  + G  T+       + 
Sbjct: 373 PIVRNTHAGLTGIALELRESAAALGLSPGARLRLVELPLATPAILAGVKTSAVITVGTAT 432

Query: 523 VSEVASWGHI 532
           +  +   G  
Sbjct: 433 LGALVGAGGY 442


>gi|83588985|ref|YP_428994.1| phosphate ABC transporter permease [Moorella thermoacetica ATCC
           39073]
 gi|83571899|gb|ABC18451.1| phosphate ABC transporter membrane protein 1, PhoT family [Moorella
           thermoacetica ATCC 39073]
          Length = 307

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 85/210 (40%), Gaps = 9/210 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F+ + G+     + I                L            T+  ++  ++++L
Sbjct: 40  IVVFIALQGLATFFANHINPWQFLFSTKWQPDRPLSEGGPLVGTLAFTVGSIAVSLLAVL 99

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYPGKVI 132
                + +AA        R    VL P ++I+  IP +  G++  +++  F+      + 
Sbjct: 100 IGGPLSIVAAVFMVEIAPRWGRRVLQPAVEILAGIPSVVYGWIGLSLLVPFLRRELHTLG 159

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LA    +    +  +      SL ++ RDL+E + +   + WQ    + +P + PG+
Sbjct: 160 FSLLAGCLVLAVMIIPTVVSLTADSLRSLSRDLKEAAYALGSTRWQTISRVLLPAARPGI 219

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +  +++ ++  +   +A +M++     +P 
Sbjct: 220 MTAIVLGLARAFGEALAVQMVIGNTRSLPT 249



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 13/160 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           + + ++A +I  P+ I                 +QP  ++LA  P+ V+  + +S +  +
Sbjct: 91  IAVSLLAVLIGGPLSIVAAVFMVEIAPRWGRRVLQPAVEILAGIPSVVYGWIGLSLLVPF 150

Query: 445 ------HLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                  L  +L    L++       + +       +   D KE A +   T W+    +
Sbjct: 151 LRRELHTLGFSLLAGCLVLAVMIIPTVVSLTADSLRSLSRDLKEAAYALGSTRWQTISRV 210

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +LP   P  +T  +     A+  ++  ++       L T+
Sbjct: 211 LLPAARPGIMTAIVLGLARAFGEALAVQMVIGNTRSLPTS 250


>gi|30260864|ref|NP_843241.1| phosphate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Ames]
 gi|47525998|ref|YP_017347.1| phosphate ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65318143|ref|ZP_00391102.1| COG0573: ABC-type phosphate transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|165872928|ref|ZP_02217552.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167635129|ref|ZP_02393445.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167641844|ref|ZP_02400084.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170708980|ref|ZP_02899411.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177652844|ref|ZP_02935217.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190568559|ref|ZP_03021465.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|218901910|ref|YP_002449744.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH820]
 gi|225862694|ref|YP_002748072.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus 03BB102]
 gi|227816412|ref|YP_002816421.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229604567|ref|YP_002865311.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254684206|ref|ZP_05148066.1| phosphate ABC transporter, permease [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725869|ref|ZP_05187651.1| phosphate ABC transporter, permease [Bacillus anthracis str. A1055]
 gi|254734432|ref|ZP_05192145.1| phosphate ABC transporter, permease [Bacillus anthracis str.
           Western North America USA6153]
 gi|254742118|ref|ZP_05199805.1| phosphate ABC transporter, permease [Bacillus anthracis str. Kruger
           B]
 gi|254755760|ref|ZP_05207793.1| phosphate ABC transporter, permease [Bacillus anthracis str.
           Vollum]
 gi|254762374|ref|ZP_05214218.1| phosphate ABC transporter, permease [Bacillus anthracis str.
           Australia 94]
 gi|301052363|ref|YP_003790574.1| phosphate ABC transporter permease [Bacillus anthracis CI]
 gi|30254313|gb|AAP24727.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. Ames]
 gi|47501146|gb|AAT29822.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|164711341|gb|EDR16894.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167510192|gb|EDR85598.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167529388|gb|EDR92139.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170126082|gb|EDS94978.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|172081878|gb|EDT66947.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190560353|gb|EDV14332.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|218537379|gb|ACK89777.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH820]
 gi|225785895|gb|ACO26112.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus 03BB102]
 gi|227003262|gb|ACP13005.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229268975|gb|ACQ50612.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|300374532|gb|ADK03436.1| phosphate ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|312880780|ref|ZP_07740580.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
 gi|310784071|gb|EFQ24469.1| binding-protein-dependent transport systems inner membrane
           component [Aminomonas paucivorans DSM 12260]
          Length = 265

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 10/158 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P     + P      A P     PL+V     + + P + L+ L++F   + +    + G
Sbjct: 85  PQAERAVLPLLVATQAAPVFALAPLLVVWFG-FGMGPKVALTALVVF---FPVALAFLQG 140

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                   +++           +R   LPG  P  + G  T    A   +++ E      
Sbjct: 141 LKHRDRGREDLLRLMGGGRIARFRAFHLPGALPPLMGGLKTGVCVAPIGAVLGEWCG--- 197

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               + GLG  + ++  + +   V   + ++      L
Sbjct: 198 ---ASRGLGFLMLQANARLATDRVFAALAVLVVLGTGL 232



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 17/177 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
            +    ++P+L   Q+ P+       VV+F      KV    L   F         +  +
Sbjct: 85  PQAERAVLPLLVATQAAPVFALAPLLVVWFGFGMGPKVALTALVVFF--------PVALA 136

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Q L +  R  E++ R        +F    +P ++P L+  +   +       VA    
Sbjct: 137 FLQGLKHRDRGREDLLRLMGGGRIARFRAFHLPGALPPLMGGLKTGV------CVAPIGA 190

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVWS 267
           V+G+      G+G  +  A        +  A+  ++ +          L R ++ W+
Sbjct: 191 VLGEWCGASRGLGFLMLQANARLATDRVFAALAVLVVLGTGLYGAVDRLERRLVWWT 247


>gi|310815496|ref|YP_003963460.1| ABC transporter, permease protein, putative [Ketogulonicigenium
           vulgare Y25]
 gi|308754231|gb|ADO42160.1| ABC transporter, permease protein, putative [Ketogulonicigenium
           vulgare Y25]
          Length = 247

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +QD++  ++ G ++        +I  I    V +       +   + P    L+A P   
Sbjct: 46  WQDLVQTVFKGALS------GYVIGVIAAFVVALLADRFAFLRRGLLPVGGFLSALPIVG 99

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+ V    +   +    +  ++ F     +L N++AG        +++ +++    W+
Sbjct: 100 TAPIFVMWFGFGWQSKAAVVVAMVFF----PLLVNIVAGLRDTTVQQRDLMTTYAAGYWQ 155

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P+   G   +   A   +IV+E          T GLG  I  S  + + 
Sbjct: 156 VLLKLRLPAAMPFIFNGLKISTTLALIGAIVAEFFGS-----PTQGLGFRIDASRGRLAL 210

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
             V   +++           +
Sbjct: 211 DVVWSAIVMSAIAGSLFYGLV 231



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 21/242 (8%)

Query: 26  VLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMV 77
            ++ G+  +L+         +    +P      V    ++ +L Q   +T  +  LS  V
Sbjct: 3   PIIFGVTLLLMWELLVRGLNVSGVILPPPSAIWVSFMRNLPTLWQDLVQTVFKGALSGYV 62

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I ++  FV A LA +   L   L+P+   + ++PI+G     V++F   +  K       
Sbjct: 63  IGVIAAFVVALLADRFAFLRRGLLPVGGFLSALPIVGTAPIFVMWFGFGWQSKAA----- 117

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               +     + +  ++   L +      ++  ++    WQ    L +P +MP +   + 
Sbjct: 118 ---VVVAMVFFPLLVNIVAGLRDTTVQQRDLMTTYAAGYWQVLLKLRLPAAMPFIFNGLK 174

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S +      + +E         P  G+G  I  +     L  +  A++       L+  
Sbjct: 175 ISTTLALIGAIVAEFFGS-----PTQGLGFRIDASRGRLALDVVWSAIVMSAIAGSLFYG 229

Query: 258 LL 259
           L+
Sbjct: 230 LV 231


>gi|284989221|ref|YP_003407775.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284062466|gb|ADB73404.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 243

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               L  +S R    +V + ++ +++P L  LT   V         +  +E   + A+  
Sbjct: 47  PAGVLLGRSGRGAGAVVVLSNVSRAVPTLALLTVLAV-------TPLGFSETGTVLALAA 99

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             V  M  + Y     + RD+ E +R+  +S  Q    +  P + P +   +  +
Sbjct: 100 FAVPPMLTNTYVGFREVDRDVREAARAMGMSRGQMLTRVEFPLASPLVATGVRTA 154



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 3/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  Y+ + F +     ++ L    +    + +++A+++ +P G+ +G     +  +   +
Sbjct: 7   AFVYLNDPFNWTRPGGILDLLVQHLRISTLAVLLAAVLAVPAGVLLGRSGRGAGAVVVLS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      L V  V+    +    +  L  F     +L N   G      D +E 
Sbjct: 67  NVSRAVPTLAL--LTVLAVTPLGFSETGTVLALAAF-AVPPMLTNTYVGFREVDRDVREA 123

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A +  ++  +    +  P   P   TG  TA 
Sbjct: 124 ARAMGMSRGQMLTRVEFPLASPLVATGVRTAA 155


>gi|307318137|ref|ZP_07597573.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306896178|gb|EFN26928.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 251

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 96/256 (37%), Gaps = 27/256 (10%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P    +R       L+  +++ G + +L              +I+  + D+  L     +
Sbjct: 7   PAAPQQRRRIEAAPLIVLIVLAGTVALLWWSGM-------AEEILAYSDDISYL---TVQ 56

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               +  A  +++L       + ++   R +   ++ + +I  ++P L  L  ++     
Sbjct: 57  HLELVAWAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLGI 116

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     + A+F ++ + +  +  + Y  L  +P  L E +    ++  Q  W + +
Sbjct: 117 G--------TVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVEL 168

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  +   +  +++      V S  +V    +I   G+G  I   I   +L  ++   
Sbjct: 169 PNALFVIFGGIRTALAI----CVGSAPLV---FLIGAGGLGELIFTGISLDELPMMMAGA 221

Query: 246 LTMLGVIFLYDQLLFR 261
           +    +  L D ++ +
Sbjct: 222 IPTAMLAVLVDFIVGQ 237



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 17/254 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
                 +R      +    V+ G    + W  +   +  ++      + +L    +  V 
Sbjct: 7   PAAPQQRRRIEAAPLIVLIVLAGTVALLWWSGMAEEILAYSDD----ISYLTVQHLELVA 62

Query: 392 VLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
               +A ++ +PVGI +       +S  +     + +  P      L ++ +        
Sbjct: 63  WAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLGIG----T 118

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +     +   T   I+ N  AG  A P    E A+   +T  +    + LP        G
Sbjct: 119 VPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVELPNALFVIFGG 178

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA      ++ +  +   G       GLG  I         P ++ G +      + +
Sbjct: 179 IRTALAICVGSAPLVFLIGAG-------GLGELIFTGISLDELPMMMAGAIPTAMLAVLV 231

Query: 570 NRFLWHPLYLYGTR 583
           +  +    Y    R
Sbjct: 232 DFIVGQIQYYLVPR 245


>gi|295836857|ref|ZP_06823790.1| osmoprotectant ABC transporter, permease [Streptomyces sp. SPB74]
 gi|197699534|gb|EDY46467.1| osmoprotectant ABC transporter, permease [Streptomyces sp. SPB74]
          Length = 215

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 65/200 (32%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A +    +   MV++ +   +   L+ +S   G +       + ++P L  +   
Sbjct: 13  QLLSDAYQHASAVFQCMVVATVIGVLIGVLSYRSEWAGNLATTATSTILTVPSLALIGLL 72

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V                  + ++    +  +  +    L  +   L + ++   +S   +
Sbjct: 73  VPIVGLGV--------APTVISLVLYGLLPIVRNAIVGLRGVDATLVDAAKGIGMSRTSR 124

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + +S +     + A      G      PG+G+ I   I      
Sbjct: 125 LLRIELPLAWPPILTGIRVS-TQMLMGIAAIAAFASG------PGLGNEIFRGIASLGSK 177

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             L  +L     I +   L 
Sbjct: 178 NALNQVLAGTVGIVVLALLF 197



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A++I + +G+         +        +   P+     L+V  V        
Sbjct: 25  VFQCMVVATVIGVLIGVLSYRSEWAGNLATTATSTILTVPSLALIGLLVPIVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L L  +      I+ N I G         + A    ++       I LP  +P  +TG
Sbjct: 85  ISLVLYGLL----PIVRNAIVGLRGVDATLVDAAKGIGMSRTSRLLRIELPLAWPPILTG 140

Query: 510 AITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +     G A  A+  S       I      LG+       K +  +V+ G + +   
Sbjct: 141 IRVSTQMLMGIAAIAAFASGPGLGNEIFRGIASLGS-------KNALNQVLAGTVGIVVL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|317123455|ref|YP_004097567.1| binding-protein-dependent transporters inner membrane component
           [Intrasporangium calvum DSM 43043]
 gi|315587543|gb|ADU46840.1| binding-protein-dependent transport systems inner membrane
           component [Intrasporangium calvum DSM 43043]
          Length = 261

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 76/202 (37%), Gaps = 9/202 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P   S   +     ++++++           + R G  LV   + ++++P LG L 
Sbjct: 18  PDGVPARLSEHVVYTAVTVLVAVVLAVPLGAWVGHTGR-GRWLVTGANALRAVPSLGLL- 75

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +   +       +   L +I  +    +  +    Y  + ++     + +R   + G 
Sbjct: 76  FAISMLVGPLIQSSLAFTLPSIIVLVILAIPPLLSGSYAGVESVDPAARDAARGMGMRGP 135

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P +MP L+  +          V+A+  I      I L G+G Y+   +  +D
Sbjct: 136 QVLAQVELPIAMPLLLSGLR----SATLQVIATATIAA---SISLGGLGRYLIDGLAARD 188

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           L  ++   + +  +    D  L
Sbjct: 189 LSQMVAGSVLVALLALFTDGAL 210



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 11/174 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY---HLNPNLWLSLLMIFG 459
           P+G W+G        +   A  L A P+      +   V       L   L   ++++  
Sbjct: 45  PLGAWVG-HTGRGRWLVTGANALRAVPSLGLLFAISMLVGPLIQSSLAFTLPSIIVLVIL 103

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               +L    AG  +     ++ A    + G +    + LP   P  ++G  +A      
Sbjct: 104 AIPPLLSGSYAGVESVDPAARDAARGMGMRGPQVLAQVELPIAMPLLLSGLRSATLQVIA 163

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + ++   S G       GLG Y+ +        ++V G +++    L  +  L
Sbjct: 164 TATIAASISLG-------GLGRYLIDGLAARDLSQMVAGSVLVALLALFTDGAL 210


>gi|206967840|ref|ZP_03228796.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|218231373|ref|YP_002365511.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus B4264]
 gi|218895770|ref|YP_002444181.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|296501466|ref|YP_003663166.1| phosphate ABC transporter permease [Bacillus thuringiensis BMB171]
 gi|206736760|gb|EDZ53907.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|218159330|gb|ACK59322.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus B4264]
 gi|218541897|gb|ACK94291.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|296322518|gb|ADH05446.1| phosphate ABC transporter permease [Bacillus thuringiensis BMB171]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|114766715|ref|ZP_01445654.1| ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601]
 gi|114541105|gb|EAU44160.1| ABC transporter, permease protein [Roseovarius sp. HTCC2601]
          Length = 279

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 76/255 (29%), Gaps = 22/255 (8%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-------HFTYQ 374
            +          L         + + W   V G  I         ++           ++
Sbjct: 20  WLARRPRSRATSLAVPVVFGVTIIVVWEAAVRGFGISPVLLPAPSVIAARMASSGSVLWE 79

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D +  +  G +T        ++  +      I +     +   + P    +AA P     
Sbjct: 80  DFVQTVVKGALT------GYVMGCLAAFVTAIVVDRFDFLRRGLLPVGNFVAALPIIGTA 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P++V    +   +    + +++ F     +L N + G        +++  ++    W   
Sbjct: 134 PILVMWFGFDWQSKAAVVVIMVFF----PMLVNTVEGLRDTSAMQRDLMRTYAAGYWTTL 189

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   P+   G   A   A   +IV+E            G+G  I+ S        
Sbjct: 190 LKLRLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVGLLQLDL 244

Query: 555 VVLGVLIMCCFVLAL 569
           V   +++      A 
Sbjct: 245 VWAEIVVAAIAGSAF 259



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 91/241 (37%), Gaps = 21/241 (8%)

Query: 23  LAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLS 74
           LA  +V G+  I++        GI    +P   V    +      L +   +T ++  L+
Sbjct: 32  LAVPVVFGVTIIVVWEAAVRGFGISPVLLPAPSVIAARMASSGSVLWEDFVQTVVKGALT 91

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V+  L  FV A +  +   L   L+P+ + + ++PI+G     V++F   +  K    
Sbjct: 92  GYVMGCLAAFVTAIVVDRFDFLRRGLLPVGNFVAALPIIGTAPILVMWFGFDWQSKAA-- 149

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +     + M  +  + L +      ++ R++    W     L +P +MP +  
Sbjct: 150 ------VVVIMVFFPMLVNTVEGLRDTSAMQRDLMRTYAAGYWTTLLKLRLPAAMPFIFN 203

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ +      + +E         P+ G+G  I+ ++    L  +   ++        
Sbjct: 204 GLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTSVGLLQLDLVWAEIVVAAIAGSA 258

Query: 255 Y 255
           +
Sbjct: 259 F 259


>gi|41406372|ref|NP_959208.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394720|gb|AAS02591.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 228

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 77/212 (36%), Gaps = 15/212 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I L        L  + R    +   +  ++ +IP L          + +  G  I
Sbjct: 23  LVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIPSLALF-----VVLPMIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   + A+       +  ++ ++L  +P  + + + +       +   + +P ++P L
Sbjct: 78  LDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYPRLSRMMKVELPLAVPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +        V    M+ VG  VI + G+GS+     +      IL  ++ +  + 
Sbjct: 138 IAGLRV------VVVTNIAMVSVGS-VIGIGGLGSWFTQGYQTGKSDQILAGIIALFALA 190

Query: 253 FLYDQLL---FRPMIVWSNKFRLERTTGIYPA 281
              D L+    R +  W++  R      +   
Sbjct: 191 VAVDGLIVLGGRLVTPWAHAVRGGARRSVVAP 222



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+    +     L  + +   +V ++I   I +P+G+ +  R          A ++   P
Sbjct: 2   HYLLTHLDDAARLTVVHLRLALVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F ++   +    L+    +  L  +     ++  V+    A P    + A++    
Sbjct: 62  SLALFVVLPMIIGTRILDEANVMVALTAYTAA-LLVRAVLEALDAVPAQISDAATAVGYP 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P  + G             V  V   G       GLG++  +  + 
Sbjct: 121 RLSRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIG-------GLGSWFTQGYQT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
           G   +++ G++ +    +A++  +
Sbjct: 174 GKSDQILAGIIALFALAVAVDGLI 197


>gi|288905486|ref|YP_003430708.1| proline/glycine betaine ABC transporter membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|306831569|ref|ZP_07464727.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978475|ref|YP_004288191.1| glycine betaine/choline ABC transporter permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732212|emb|CBI13777.1| putative proline/glycine betaine ABC transporter, membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|304426354|gb|EFM29468.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178403|emb|CBZ48447.1| glycine betaine/choline ABC transporter permease component
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 211

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 5/164 (3%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G +   +P +        Q L   P+     +++  +    L   + L +L I     
Sbjct: 40  PLGYFSYEKPFVRQLSTLLTQGLRVIPSLGILFILIPFIGVGRLPALIALVILGIP---- 95

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG-GAWNAS 521
            IL N I G ++   +  E A    +T  +    +  P   P+ + G   A      +A+
Sbjct: 96  PILLNTIVGFASVSENLLETALGLGMTRSQLLTKVQFPLALPHILNGIKLALVEIIASAT 155

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           + + + + G   L  TGLG Y  +    G     +L  L M  F
Sbjct: 156 LATYIGAGGLGTLIFTGLGLYRYDLLLIGGGSVAILSFLSMIIF 199



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 62/170 (36%), Gaps = 15/170 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                + +   +  +   +   ++ IP LG L   + +             L A+ A+  
Sbjct: 40  PLGYFSYEKPFVRQLSTLLTQGLRVIPSLGILFILIPFIGVG--------RLPALIALVI 91

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  +      ++  +L E +    ++  Q    +  P ++P ++  + +++    
Sbjct: 92  LGIPPILLNTIVGFASVSENLLETALGLGMTRSQLLTKVQFPLALPHILNGIKLAL---- 147

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             ++AS  +    T I   G+G+ I   +       +L    ++  + FL
Sbjct: 148 VEIIASATLA---TYIGAGGLGTLIFTGLGLYRYDLLLIGGGSVAILSFL 194


>gi|228957134|ref|ZP_04118904.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802581|gb|EEM49428.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|206977819|ref|ZP_03238709.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus H3081.97]
 gi|229137515|ref|ZP_04266125.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST26]
 gi|206744016|gb|EDZ55433.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus H3081.97]
 gi|228645962|gb|EEL02186.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST26]
          Length = 297

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAVSR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 189 GLGSTKWQAVSRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|39935108|ref|NP_947384.1| glycine betaine ABC transporter substrate-binding protein
           [Rhodopseudomonas palustris CGA009]
 gi|39648959|emb|CAE27480.1| possible choline ABC transporter permease and substrate binding
           protein [Rhodopseudomonas palustris CGA009]
          Length = 515

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 21/198 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ 111
           + +LP Y        L+A+ + L+ +   A  A     L   L+    I+Q+IP      
Sbjct: 13  LANLPDYLGAHVRVSLAALALGLIVSLPLAIFARHRPVLRGTLLGFAGIVQTIPGLALLA 72

Query: 112 -----ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                +L     ++  F   +        L A+ A+    +  +  +    L  I   L 
Sbjct: 73  LFYPLLLALAALSMSAFGVSFSA---FGFLPAVLALALYSMLPVLRNSITGLDGIDPALI 129

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +    ++  Q    + +P +MP ++  +  +    W    A+    +G T      +G
Sbjct: 130 EAAEGVGMTERQVLTMVELPLAMPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LG 182

Query: 227 SYIALAIKEQDLLAILYA 244
           +YI   ++ Q+ + +L+ 
Sbjct: 183 NYIFAGLQTQNWILVLFG 200



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 20/205 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +     ++D L  +        RV +  + +  I+ +P+ I+   RP +   +  FA ++
Sbjct: 3   LFADPRWRDALANLPDYLGAHVRVSLAALALGLIVSLPLAIFARHRPVLRGTLLGFAGIV 62

Query: 426 AAFPANVFFPLVV------------SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
              P      L              +    +     L   L +   +   +L N I G  
Sbjct: 63  QTIPGLALLALFYPLLLALAALSMSAFGVSFSAFGFLPAVLALALYSMLPVLRNSITGLD 122

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E A    +T  +    + LP   P  + G  TA    W     +     G   
Sbjct: 123 GIDPALIEAAEGVGMTERQVLTMVELPLAMPVIMAGIRTAA--VWVIGTATLSTPIGQTS 180

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLG 558
                LG YI    +  ++  V+ G
Sbjct: 181 -----LGNYIFAGLQTQNWILVLFG 200


>gi|295115041|emb|CBL35888.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [butyrate-producing bacterium SM4/1]
          Length = 142

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+F I     + +T +    + N+ +D  + +R+   S  Q  + + +P +MP ++   
Sbjct: 10  GAVFIIALGSWFAVTVASMSGIQNVDKDYFDAARTLGASERQLVFQVAIPHAMPSILQGC 69

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIF 253
             +MS     ++ +EM+ V        G+G Y+  A        + A L+ +  +  V+ 
Sbjct: 70  TQAMSSSCVAIMIAEMMGVKA------GLGWYMNWAKSWAAYDKMFAALFVICFIFTVVT 123

Query: 254 LYDQLLFRPMIVWSN 268
               L+ R  + W N
Sbjct: 124 KVLDLIKRRALRWQN 138



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 47/123 (38%), Gaps = 6/123 (4%)

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               ++  G+ + +    ++G      D+ + A +   +  +    + +P   P  + G 
Sbjct: 10  GAVFIIALGSWFAVTVASMSGIQNVDKDYFDAARTLGASERQLVFQVAIPHAMPSILQGC 69

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A   +  A +++E+           GLG Y+  +    ++ ++   + ++C     + 
Sbjct: 70  TQAMSSSCVAIMIAEMMG------VKAGLGWYMNWAKSWAAYDKMFAALFVICFIFTVVT 123

Query: 571 RFL 573
           + L
Sbjct: 124 KVL 126


>gi|259502180|ref|ZP_05745082.1| hosphate ABC superfamily ATP binding cassette transporter, permease
           protein [Lactobacillus antri DSM 16041]
 gi|259169798|gb|EEW54293.1| hosphate ABC superfamily ATP binding cassette transporter, permease
           protein [Lactobacillus antri DSM 16041]
          Length = 299

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 82/215 (38%), Gaps = 18/215 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------DVHSLPQYASRTTLR 71
           +   LA V++ G++  +L  +    +     D   +                 A    + 
Sbjct: 23  LISYLAIVIIGGLVATILLFLTSKGLALFTKDGYSLGTFLTSSNWQPSHHFYGALPMIVT 82

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
             +  +++ +     A ++A        +R    + P+++++  +P + +    LT  V 
Sbjct: 83  SFAVTLLAGIVALPLALVSAVAITEMLPKRANQWIQPVIELLVGVPSVVYGYVGLTVIVP 142

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L+ G   G  LAA   +F   +  MT     +L  +P++    S     + WQ   
Sbjct: 143 RLGQLFGGTGFGI-LAATCVLFLMVLPTMTSMTIDNLRRVPKEYRLASAGLGATRWQTIS 201

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +P +  G++  M+  M+  +   +A +M++  
Sbjct: 202 RVVIPSAKGGILTAMIFGMARAFGEALAVQMVIGN 236



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 10/206 (4%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G ++G    S  +  +H  Y  +  ++    +T+   +V + +A +  + +         
Sbjct: 55  GYSLGTFLTSSNWQPSHHFYGALPMIVTSFAVTLLAGIVALPLALVSAVAITEM--LPKR 112

Query: 414 ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF----- 466
            +  IQP  +LL   P+ V+    L V       L       +L      + ++      
Sbjct: 113 ANQWIQPVIELLVGVPSVVYGYVGLTVIVPRLGQLFGGTGFGILAATCVLFLMVLPTMTS 172

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
             I      P +++  ++    T W+    +++P      +T  I     A+  ++  ++
Sbjct: 173 MTIDNLRRVPKEYRLASAGLGATRWQTISRVVIPSAKGGILTAMIFGMARAFGEALAVQM 232

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSF 552
              G+  +   GL +  A  T   + 
Sbjct: 233 V-IGNAAVMPDGLMSSAATLTSVLTT 257


>gi|220913301|ref|YP_002488610.1| binding-protein-dependent transporters inner membrane component
           [Arthrobacter chlorophenolicus A6]
 gi|219860179|gb|ACL40521.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 242

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 81/207 (39%), Gaps = 15/207 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           + A +  +  L  MV+ L+ +   A LA ++  L  V++    ++ +IP L         
Sbjct: 13  ERAGQHLVLALVPMVLGLVLSIPLAQLARRNGALRSVVLTSSSLLYTIPSLALFIILPTI 72

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                 G  +   L  I A+    V  +  +   +  ++ +++ + + +       +F  
Sbjct: 73  L-----GTRVLDPLNVIVALTIYAVALLVRAALDAFDSVDQEVSQAAVAMGYRPLARFLQ 127

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P S+P +   + +        V  + ++ +G+       +G      ++   +  I+
Sbjct: 128 VDLPLSLPVMFAGLRVVSVSNISLVSVAALLGIGN-------LGMLFTSGLQRDFVTEIV 180

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++ +L +  L D    LL R +  W
Sbjct: 181 VGIVAILVLALLMDAVLVLLERILTPW 207



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 69/202 (34%), Gaps = 8/202 (3%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   V       +   +V +++  ++ IP+         + S +   + LL   P+ 
Sbjct: 4   FLSNSGMVFERAGQHLVLALVPMVLGLVLSIPLAQLARRNGALRSVVLTSSSLLYTIPSL 63

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             F ++ + +    L+P   +  L I+     ++   +    +   +  + A +      
Sbjct: 64  ALFIILPTILGTRVLDPLNVIVALTIYAVA-LLVRAALDAFDSVDQEVSQAAVAMGYRPL 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +  + LP   P    G         +   V+ +   G+       LG       ++  
Sbjct: 123 ARFLQVDLPLSLPVMFAGLRVVSVSNISLVSVAALLGIGN-------LGMLFTSGLQRDF 175

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             E+V+G++ +    L ++  L
Sbjct: 176 VTEIVVGIVAILVLALLMDAVL 197


>gi|49183707|ref|YP_026959.1| phosphate ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|49476881|ref|YP_034972.1| phosphate ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118476392|ref|YP_893543.1| phosphate ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|170689430|ref|ZP_02880621.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|196035686|ref|ZP_03103089.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|196047070|ref|ZP_03114288.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus 03BB108]
 gi|228913404|ref|ZP_04077037.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228925901|ref|ZP_04088985.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228932145|ref|ZP_04095034.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228944465|ref|ZP_04106838.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229089777|ref|ZP_04221037.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-42]
 gi|229183047|ref|ZP_04310279.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BGSC 6E1]
 gi|49177634|gb|AAT53010.1| phosphate ABC transporter, permease protein, putative [Bacillus
           anthracis str. Sterne]
 gi|49328437|gb|AAT59083.1| phosphate ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118415617|gb|ABK84036.1| phosphate ABC transporter membrane protein 1, PhoT family [Bacillus
           thuringiensis str. Al Hakam]
 gi|170666592|gb|EDT17364.1| putative phosphate ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|195991653|gb|EDX55618.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus W]
 gi|196022051|gb|EDX60740.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus 03BB108]
 gi|228600504|gb|EEK58092.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BGSC 6E1]
 gi|228693585|gb|EEL47288.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock3-42]
 gi|228815367|gb|EEM61615.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228827523|gb|EEM73268.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228833916|gb|EEM79469.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228846313|gb|EEM91332.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 297

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|288916568|ref|ZP_06410944.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288351999|gb|EFC86200.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 285

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 8/148 (5%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +     I +   P+A LL   P     PL+   + Y         +++ +    + ++ 
Sbjct: 110 LMAQARWIENSFYPWAILLQTIPVLAIVPLIGFWLGYGF----WSRTVVCVVIAMFPMIT 165

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G  +      ++ +   +  WR   ++ LP   P    G   + G A   +IV + 
Sbjct: 166 NTLLGIQSVDAGHHDLFTLRRVGRWRRLIHLELPSALPAIFAGLRISAGLAVIGAIVGDF 225

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                      G+GA I   T   S   
Sbjct: 226 F----FRRGDVGIGALIDNYTRDLSSGR 249



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIIN--ILLHGIQETTVPRD--IVDIVPITLDVHSLP 62
           L    +R + P +  L   + +  +++   L    +    P    + +          + 
Sbjct: 24  LAARTARTVLPPLAVLGVVLAIWYVVSYCFLAPRRRFLLPPPHEIVAEGFLDRRAAGEIL 83

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                T    L+ + I+ +     A L A++R +     P   ++Q+IP+L  +     +
Sbjct: 84  TALGGTAEVALAGLAIAAVIGVAAAILMAQARWIENSFYPWAILLQTIPVLAIVPLIGFW 143

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +  + +   + A+F         M  +    + ++     ++    R+  W++  +
Sbjct: 144 LGYGFWSRTVVCVVIAMF--------PMITNTLLGIQSVDAGHHDLFTLRRVGRWRRLIH 195

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           L +P ++P +   + +S        +  +            GIG+ I
Sbjct: 196 LELPSALPAIFAGLRISAGLAVIGAIVGDFF----FRRGDVGIGALI 238


>gi|242243768|ref|ZP_04798212.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
 gi|242232771|gb|EES35083.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, membrane protein [Staphylococcus
           epidermidis W23144]
          Length = 231

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK RRL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYRRLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYRRLSWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|227546347|ref|ZP_03976396.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227213328|gb|EEI81200.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 336

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGKTFALFDNIATVFTYQDGIFGRWL-LNTLLYVVVGAGGATLLAIMGGYAL 151

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 272 LKDADWYPLTIGLNQWKDQASTAG 295



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWLLNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 184 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QISLPLLAPGIVTTALFTIVATWN 263


>gi|75761687|ref|ZP_00741632.1| Phosphate transport system permease protein pstC [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228899400|ref|ZP_04063661.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis IBL 4222]
 gi|228906469|ref|ZP_04070350.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis IBL 200]
 gi|228937982|ref|ZP_04100605.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228951214|ref|ZP_04113329.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228963817|ref|ZP_04124957.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228970859|ref|ZP_04131498.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977463|ref|ZP_04137857.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis Bt407]
 gi|229068400|ref|ZP_04201703.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           F65185]
 gi|229078027|ref|ZP_04210636.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock4-2]
 gi|229143440|ref|ZP_04271868.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST24]
 gi|229149055|ref|ZP_04277298.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           m1550]
 gi|229177244|ref|ZP_04304631.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           172560W]
 gi|229188923|ref|ZP_04315955.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           ATCC 10876]
 gi|74490818|gb|EAO54089.1| Phosphate transport system permease protein pstC [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228594557|gb|EEK52344.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           ATCC 10876]
 gi|228606250|gb|EEK63684.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           172560W]
 gi|228634415|gb|EEK91001.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           m1550]
 gi|228640028|gb|EEK96430.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-ST24]
 gi|228705365|gb|EEL57742.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock4-2]
 gi|228714861|gb|EEL66733.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           F65185]
 gi|228782287|gb|EEM30471.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis Bt407]
 gi|228788860|gb|EEM36800.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228795888|gb|EEM43356.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228808511|gb|EEM55015.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228821691|gb|EEM67693.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228853196|gb|EEM97972.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis IBL 200]
 gi|228860254|gb|EEN04653.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis IBL 4222]
          Length = 297

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|304314076|ref|YP_003849223.1| phosphate transport system permease protein [Methanothermobacter
           marburgensis str. Marburg]
 gi|302587535|gb|ADL57910.1| predicted phosphate transport system permease protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 291

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 81/215 (37%), Gaps = 17/215 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA----MV 77
           + A   +I I+ I+    +E         ++     +   P         M+       +
Sbjct: 16  VTAIFSIIAILLIITFIFREGIPIFQDYGVINFIFGMDWAPSDGKYGVFTMIVGSLCITL 75

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           +SL      + L A          +  +L P+++ + +IP + +    L   V Y     
Sbjct: 76  LSLAIAVPLSILCAIFMAEVAPEIMRKILKPVIETLAAIPSVVYGFFGLIVLVPYVRANI 135

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            G   G   AA   I T  +     S+   ++ ++P + +E S +   + WQ    +  P
Sbjct: 136 GGTGFGMLTAA--LILTVMIMPTIISVSEDAIRSVPLEYKEASLALGATHWQTIRRVIFP 193

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            ++PG++ ++++ M       +A  M+    T IP
Sbjct: 194 AAIPGIITSIILGMGRAIGETLAVIMVAGNVTQIP 228



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 98/277 (35%), Gaps = 31/277 (11%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +   R +  E  L + +   +  +L I  F    G+ I   +  I +I   F        
Sbjct: 2   ISKTRENLIEKGLFVTAIFSIIAILLIITFIFREGIPIFQDYGVINFI---FGMDWAPSD 58

Query: 380 IWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPH------ISSKIQPFAQLLAAFPANV 432
              G  TM    + + +++  I +P+ I             +   ++P  + LAA P+ V
Sbjct: 59  GKYGVFTMIVGSLCITLLSLAIAVPLSILCAIFMAEVAPEIMRKILKPVIETLAAIPSVV 118

Query: 433 F--FPLVVSC----VSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASS 485
           +  F L+V       +       +  + L++       + +V      + P ++KE + +
Sbjct: 119 YGFFGLIVLVPYVRANIGGTGFGMLTAALILTVMIMPTIISVSEDAIRSVPLEYKEASLA 178

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL------ 539
              T W+  R +I P   P  +T  I   G A   ++   + +     + ++ L      
Sbjct: 179 LGATHWQTIRRVIFPAAIPGIITSIILGMGRAIGETLAVIMVAGNVTQIPSSILDPVRAL 238

Query: 540 --------GAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                   G              ++L VLIM   V+A
Sbjct: 239 TSNIALEMGYATGLHYSALFGTAIILFVLIMILLVVA 275


>gi|300813926|ref|ZP_07094230.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511989|gb|EFK39185.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 246

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 86/196 (43%), Gaps = 9/196 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++  I  +L++       P  +       L   +       T+ ++L   ++ L    +
Sbjct: 19  IVIWQIFALLINEEILIVSPFKVFLKTLENLQDKTFYLAIFNTSWKILMGFLLGLFIGVI 78

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            + ++ K +     + P++  ++S+P++ F+   +++  + Y    I A ++  FAIF +
Sbjct: 79  LSFISYKFKTFKDFIYPLVQFIKSVPVVSFIMLLLMFLNSKYLSVFIPAIMS--FAIFYT 136

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                  ++ + L +I   + E+++ F +S   K  Y+ +    P L     ++M   + 
Sbjct: 137 -------NILEGLLSIDYKILEMAKIFSISTKNKLKYIYLHSLKPYLYSGASLAMGISFK 189

Query: 206 FVVASEMIVVGDTVIP 221
             +++E+I + D  I 
Sbjct: 190 AGLSAEVIGIADKTIG 205



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 15/218 (6%)

Query: 344 LDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           + IFW  +    A+      +        +                 T +++++  ++  
Sbjct: 14  VAIFWIVIWQIFALLINEEILIVSPFKVFLKTLENLQDKTFYLAIFNTSWKILMGFLLGL 73

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            I + +             I P  Q + + P   F  L++  ++  +L+        ++ 
Sbjct: 74  FIGVILSFISYKFKTFKDFIYPLVQFIKSVPVVSFIMLLLMFLNSKYLSV---FIPAIMS 130

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              +Y   N++ G  +      E+A  F I+     +YI L  + PY  +GA  A G ++
Sbjct: 131 FAIFYT--NILEGLLSIDYKILEMAKIFSISTKNKLKYIYLHSLKPYLYSGASLAMGISF 188

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            A + +EV            +G  + ES        + 
Sbjct: 189 KAGLSAEVIGIADKT-----IGRMLYESKVYLDIANLF 221


>gi|145596798|ref|YP_001161095.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145306135|gb|ABP56717.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 244

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 11/212 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +            +A+++  L  +        + R G ++V + ++  ++P L  
Sbjct: 22  TNPGGILDRTGEHLAISAAAVLLGCLVAWPIGLWLGHTGRGGGLVVLVANLTLAVPTLAL 81

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + Y  +  +  +  + +R    S
Sbjct: 82  LTILPLTFLGFGRPPVVVALAVFAVP-------PLLANAYTGVRAVDPEARDAARGMGFS 134

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-TVIPLPGIGSYIALAIK 234
           GWQ    + +P ++P L      +          +  +  G    I   G G  IA    
Sbjct: 135 GWQLLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQIIRAGFGLDIAAGGG 194

Query: 235 EQDLLAILYAMLTMLG--VIFLYDQLLF-RPM 263
           +     +L A L M+   V+ L ++L+  RP+
Sbjct: 195 QILAGGLLVAGLAMVVELVLALVERLVTPRPL 226



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 6/222 (2%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           VA G    ++ ++ +   + +   ++      +      +++  ++  P+G+W+G     
Sbjct: 3   VAAGPIEAAVIWLNDPLNWTNPGGILDRTGEHLAISAAAVLLGCLVAWPIGLWLGHTGRG 62

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              +   A L  A P      ++      +   P +    +        +L N   G  A
Sbjct: 63  GGLVVLVANLTLAVPTLALLTILPLTFLGFGRPPVVVALAVFAVP---PLLANAYTGVRA 119

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI-H 533
              + ++ A     +GW+  R + LP   PY   G  TA       + ++   + G +  
Sbjct: 120 VDPEARDAARGMGFSGWQLLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQ 179

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMC--CFVLALNRFL 573
           +   G G  IA    +     +++  L M     +  + R +
Sbjct: 180 IIRAGFGLDIAAGGGQILAGGLLVAGLAMVVELVLALVERLV 221


>gi|282881793|ref|ZP_06290450.1| ABC transporter, permease protein [Peptoniphilus lacrimalis 315-B]
 gi|281298366|gb|EFA90805.1| ABC transporter, permease protein [Peptoniphilus lacrimalis 315-B]
          Length = 246

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 86/196 (43%), Gaps = 9/196 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++  I  ++++       P  +       L   +       T+ ++L   ++ L    +
Sbjct: 19  IVIWQIFALIINEEILIVSPFKVFLKTLDNLQDKTFYLAIFNTSWKILMGFLLGLFIGVI 78

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            + ++ K +     + P++  ++S+P++ F+   +++  + Y    I A ++  FAIF +
Sbjct: 79  LSFISYKFKTFKDFIYPLVQFIKSVPVVSFIMLLLMFLNSKYLSVFIPAIMS--FAIFYT 136

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                  ++ + L +I   + E+++ F +S   K  Y+ +    P L     ++M   + 
Sbjct: 137 -------NILEGLLSIDYKILEMAKIFSISTKNKLKYIYLHSLKPYLYSGASLAMGISFK 189

Query: 206 FVVASEMIVVGDTVIP 221
             +++E+I + D  I 
Sbjct: 190 AGLSAEVIGIADKTIG 205



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 15/218 (6%)

Query: 344 LDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           + IFW  +    A+      +        +                 T +++++  ++  
Sbjct: 14  VAIFWIVIWQIFALIINEEILIVSPFKVFLKTLDNLQDKTFYLAIFNTSWKILMGFLLGL 73

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            I + +             I P  Q + + P   F  L++  ++  +L+        ++ 
Sbjct: 74  FIGVILSFISYKFKTFKDFIYPLVQFIKSVPVVSFIMLLLMFLNSKYLSV---FIPAIMS 130

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
              +Y   N++ G  +      E+A  F I+     +YI L  + PY  +GA  A G ++
Sbjct: 131 FAIFYT--NILEGLLSIDYKILEMAKIFSISTKNKLKYIYLHSLKPYLYSGASLAMGISF 188

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            A + +EV            +G  + ES        + 
Sbjct: 189 KAGLSAEVIGIADKT-----IGRMLYESKVYLDIANLF 221


>gi|126462579|ref|YP_001043693.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126104243|gb|ABN76921.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 287

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     +R +   ++P     Q+IPIL  
Sbjct: 78  TSKRSLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M + L +      ++  ++  S
Sbjct: 138 APMIIVVLNSIGVSGLLPKAVISAYLSF----FPVVVGMVKGLRSPDAMQLDLLSTYNAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 194 RAQAFWKLRLPASMPYLFASLKVGIAASLVGAIVGEL-----PTGAVAGLGARLLSGSYY 248

Query: 236 QDLLAIL 242
              + I 
Sbjct: 249 GQTIQIW 255



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G IT+   ++   I + + I + + I     +   + P+A      P     P++
Sbjct: 82  SLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAIAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + ++  ++ G  +      ++ S+++ +  + +  +
Sbjct: 142 IVVLNSIGVSGLLPKAVISAYLSFFPVVVGMVKGLRSPDAMQLDLLSTYNASRAQAFWKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 202 RLPASMPYLFASLKVGIAASLVGAIVGELPTGA-----VAGLGARLLSGSYYGQTIQIW 255


>gi|311278886|ref|YP_003941117.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308748081|gb|ADO47833.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 376

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++  LL          +          +L+ +Q+IP +      +    
Sbjct: 168 LQQHLILLFGTLLPGLLIGVPVGLWCWQHPVRQARTFTLLNAIQTIPSVALFGLLIAPLA 227

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L                   A+ A+    +  +   +   L  +  D+ E + +  +S 
Sbjct: 228 GLVRHFPWLGAAGIGGTGLTPALIALVLYALLPLVRGVVAGLQQVAADVLESASAMGMSH 287

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+FW + +P +MP L+ ++ +         V + +I  G       G G+ +   +   
Sbjct: 288 RQRFWRVQLPLAMPVLLRSLRVVTVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 340

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L  +L  ++ ++ +  + D L 
Sbjct: 341 ALDLVLLGVIPVIALAVVVDALF 363



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 88/258 (34%), Gaps = 23/258 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   +L S+    ++L+   + +   +        +  +  +   QDV        + + 
Sbjct: 116 DAIRRLTSSALWRWLLNAQIWILPLVLLGAGTLNDLSLLREYANRQDVFDAALQQHLILL 175

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS--------- 439
                ++   +I +PVG+W    P   ++       +   P+   F L+++         
Sbjct: 176 --FGTLLPGLLIGVPVGLWCWQHPVRQARTFTLLNAIQTIPSVALFGLLIAPLAGLVRHF 233

Query: 440 ----CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                           L  L+++     ++  V+AG      D  E AS+  ++  + + 
Sbjct: 234 PWLGAAGIGGTGLTPALIALVLY-ALLPLVRGVVAGLQQVAADVLESASAMGMSHRQRFW 292

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  +             ++V+ +   G       G GA + +     +   V
Sbjct: 293 RVQLPLAMPVLLRSLRVVTVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLV 345

Query: 556 VLGVLIMCCFVLALNRFL 573
           +LGV+ +    + ++   
Sbjct: 346 LLGVIPVIALAVVVDALF 363


>gi|229042578|ref|ZP_04190321.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH676]
 gi|229108323|ref|ZP_04237942.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock1-15]
 gi|229126141|ref|ZP_04255162.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-Cer4]
 gi|228657348|gb|EEL13165.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           BDRD-Cer4]
 gi|228675160|gb|EEL30385.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           Rock1-15]
 gi|228726797|gb|EEL78011.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH676]
          Length = 297

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  SFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|196042065|ref|ZP_03109350.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|196027090|gb|EDX65712.1| putative phosphate ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
          Length = 297

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|326331118|ref|ZP_08197415.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325951084|gb|EGD43127.1| ABC transporter, permease protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 300

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 90/261 (34%), Gaps = 9/261 (3%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +   +   RT  V+R    +    + +   ++ +  +  + V+      +          
Sbjct: 29  AAPAEPRRRTPPVLRRLLAKVVPMIAALAGLAGLWYLVTYVVLSEDKRFLLPPPHQVFGE 88

Query: 370 HFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                +V+  +        +V +  ++I+ +I +   + +     +   + P+A +L   
Sbjct: 89  TLGRPEVMQPMLAALWQSVQVALAGLVISVVIGMAWAMVMAQTRLLEKVLYPYAVILQTV 148

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL+   + Y          ++ +    + ++ N + G  +      ++ +    
Sbjct: 149 PILALTPLIGIWMGYG----ISARIVVCVIIAVFPMIANTLFGLQSATAPAHDLFTLNRA 204

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              +    + LP   P   TG   A G +    IV +     +    + G+G  +   T 
Sbjct: 205 NRLQRLLKLQLPAAMPAIFTGLRNAAGLSVIGVIVGDF----YFQQGSPGIGGLLRVYTL 260

Query: 549 KGSFPEVVLGVLIMCCFVLAL 569
           + S   + + +++   F + +
Sbjct: 261 RLSMEPLFMAIILTALFGVVV 281



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 14/189 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           ++    L+ +VIS++    +A + A++R L  VL P   I+Q++PIL       ++    
Sbjct: 105 QSVQVALAGLVISVVIGMAWAMVMAQTRLLEKVLYPYAVILQTVPILALTPLIGIWMGYG 164

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                     A I       V+ M  +    L +      ++    R +  Q+   L +P
Sbjct: 165 I--------SARIVVCVIIAVFPMIANTLFGLQSATAPAHDLFTLNRANRLQRLLKLQLP 216

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            +MP +   +  +       V+  +           PGIG  + +      +  +  A++
Sbjct: 217 AAMPAIFTGLRNAAGLSVIGVIVGDFY----FQQGSPGIGGLLRVYTLRLSMEPLFMAII 272

Query: 247 --TMLGVIF 253
              + GV+ 
Sbjct: 273 LTALFGVVV 281


>gi|239939511|ref|ZP_04691448.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|239986000|ref|ZP_04706664.1| ABC transporter permease [Streptomyces roseosporus NRRL 11379]
 gi|291442941|ref|ZP_06582331.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291345888|gb|EFE72792.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 223

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 64/166 (38%), Gaps = 15/166 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +++         L   + R   V + +    +++P +G     V+ F+        
Sbjct: 36  LLATLVAAAIALPIGLLIGHTGRGAFVAINLSSFGRALPTVG---LVVLVFLASGLSM-- 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                   A+    V ++  + Y  +  +  ++ + +R   +  +Q  + + +P ++P +
Sbjct: 91  ---WPVYIALVALAVPSIVTNTYAGMTAVDPEVRDAARGQGMRWYQVLFQVELPLALPLI 147

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +  + +++         +  +  G       G+G Y+   + ++DL
Sbjct: 148 MTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDL 186



 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++  ++A+ I +P+G+ IG     +      +    A P      LVV       L+   
Sbjct: 36  LLATLVAAAIALPIGLLIGHTGRGAFVAINLSSFGRALPTVG---LVVLVFLASGLSMWP 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I+ N  AG +A   + ++ A    +  ++    + LP   P  +TG 
Sbjct: 93  VYIALVAL-AVPSIVTNTYAGMTAVDPEVRDAARGQGMRWYQVLFQVELPLALPLIMTGL 151

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             A       + ++   S+G       GLG Y+ +   +    +
Sbjct: 152 RLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQ 188


>gi|225378786|ref|ZP_03756007.1| hypothetical protein ROSEINA2194_04456 [Roseburia inulinivorans DSM
           16841]
 gi|225209378|gb|EEG91732.1| hypothetical protein ROSEINA2194_04456 [Roseburia inulinivorans DSM
           16841]
          Length = 257

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 12/200 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            ++ R+ +    A+   + +         I   +     +L A P   F  LV+  +   
Sbjct: 65  FSLERIALGFFCAAAGGVLLSALAYHVKLIRDILALPVAVLKATPVASFIVLVLIWM--- 121

Query: 445 HLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              P+  LS+L+ F   + I++ N++ G         E+A  F +T W    Y+   G+F
Sbjct: 122 ---PSRNLSILISFIMAFPIIYTNLLEGFEHLDRKLFEMAKIFRMTFWNKMYYLYFGGLF 178

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y+ +    A G  + A I +E+            +G  +  +      P++     ++ 
Sbjct: 179 AYFRSACAIAIGMCFKAGIAAEIIGIPKGS-----IGEKLYNAKIYLETPDLFAWTFVII 233

Query: 564 CFVLALNRFLWHPLYLYGTR 583
              +   +     L L   R
Sbjct: 234 AVSVLFEKIFQWLLSLLAHR 253



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 92/241 (38%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ +  ++L+    ++ L        P  +   +   +   S  +    +  R+      
Sbjct: 17  LWTIAFWLLLWQFASMALDKQILLASPLSVGRCLLSLVRTFSFWESIWFSLERIALGFFC 76

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +     + + LA   + +  +L   + ++++ P+  F+   +++         + +   +
Sbjct: 77  AAAGGVLLSALAYHVKLIRDILALPVAVLKATPVASFIVLVLIW---------MPSRNLS 127

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I   F      +  ++ +   ++ R L E+++ FR++ W K +YL              +
Sbjct: 128 ILISFIMAFPIIYTNLLEGFEHLDRKLFEMAKIFRMTFWNKMYYLYFGGLFAYFRSACAI 187

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   +   +A+E+I      IP   IG  +  A    +   +      ++ V  L++++
Sbjct: 188 AIGMCFKAGIAAEIIG-----IPKGSIGEKLYNAKIYLETPDLFAWTFVIIAVSVLFEKI 242

Query: 259 L 259
            
Sbjct: 243 F 243


>gi|284044716|ref|YP_003395056.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948937|gb|ADB51681.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 229

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +   L +          ++M I+L+             R     + I ++ +++P L
Sbjct: 11  IGENTALLWELTLDHLALTAASMAIALVIAIPLGVWLGHLHRFSFAAINISNVGRALPSL 70

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             ++  V      +        +  + A+    V  M  + Y ++  + RD  E +R   
Sbjct: 71  AVISIGVALLGIGF--------VNVMVALVILAVPLMLTNAYVAVDGVDRDAVEAARGMG 122

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++  +    + +P ++P +   +  ++
Sbjct: 123 MTPTEVLLRVELPLALPLIFAGIRTAV 149



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 4/128 (3%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA +I IP+G+W+G     S      + +  A P+     + V+ +    +
Sbjct: 26  LALTAASMAIALVIAIPLGVWLGHLHRFSFAAINISNVGRALPSLAVISIGVALLGIGFV 85

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           N  + L +L        +L N          D  E A    +T       + LP   P  
Sbjct: 86  NVMVALVIL----AVPLMLTNAYVAVDGVDRDAVEAARGMGMTPTEVLLRVELPLALPLI 141

Query: 507 VTGAITAC 514
             G  TA 
Sbjct: 142 FAGIRTAV 149


>gi|47568847|ref|ZP_00239541.1| phosphate ABC transporter, permease protein [Bacillus cereus G9241]
 gi|47554523|gb|EAL12880.1| phosphate ABC transporter, permease protein [Bacillus cereus G9241]
          Length = 296

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 296



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 128 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 281


>gi|283470601|emb|CAQ49812.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           aureus subsp. aureus ST398]
          Length = 305

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPTSVREASYGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A P   +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPTSVREASYGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|261364913|ref|ZP_05977796.1| abcb protein [Neisseria mucosa ATCC 25996]
 gi|288566694|gb|EFC88254.1| abcb protein [Neisseria mucosa ATCC 25996]
          Length = 265

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V+ I +A    +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVLGISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 100/248 (40%), Gaps = 20/248 (8%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRMLSA 75
                 + + ++ +   G         +   V +      L Q+        +  R +  
Sbjct: 24  GFAGLSVAMAVVALWAWG-SAVFGEFMLPAPVEVFQKSLDLLQHFQENEIGISLWRSVLG 82

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + ++L        +A   +    +L P++ ++ ++P + ++   + +F    P       
Sbjct: 83  ISVALAAGLAAGLVAGSFKTAMALLKPVITVLLAMPPIIWVVMALFWFGFGNP------- 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++ +
Sbjct: 136 -SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVISS 194

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + L+
Sbjct: 195 IGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVSLF 248

Query: 256 DQLLFRPM 263
           + L+ +P+
Sbjct: 249 EYLITKPL 256


>gi|254474882|ref|ZP_05088268.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
 gi|214029125|gb|EEB69960.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
          Length = 281

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 88/272 (32%), Gaps = 22/272 (8%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
             + +         +            +QL         + + W  +V G+ + +     
Sbjct: 5   VLAVIVWCAGWWVNSRLANSPQSQTRLVQLLVPGIFGLTILLVWELLVRGLDVSLVILPA 64

Query: 365 GYIVN-------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             ++           + D +  I  G ++ + +     + + + +           +   
Sbjct: 65  PSVIAARFAESLPILWADFMQTIVKGALSGYVIGCGAALLTAVAVD------RSDFLRRG 118

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           + P    +AA P     P++V    +   +    + +++ F        N +AG      
Sbjct: 119 LLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLRETDQ 174

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +++  ++  + W+ +  + LP   P+   G   A   A   +IV+E          T 
Sbjct: 175 MQRDLMQTYAASYWQSFFKLRLPAALPFIFNGLKIATTLALVGAIVAEFFGS-----PTV 229

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           G+G  I+ S  + +   V   +L+      A 
Sbjct: 230 GMGFRISTSVGQLALDMVWAEILVAALAGSAF 261



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 99/263 (37%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF L   ++   ++  L   +     P  I      +L +  L     +T ++ 
Sbjct: 33  QLLVPGIFGLTILLVWELLVRGLDVSLVILPAPSVIAARFAESLPI--LWADFMQTIVKG 90

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS  VI      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K 
Sbjct: 91  ALSGYVIGCGAALLTAVAVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKA 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F +          +    L    +   ++ +++  S WQ F+ L +P ++P 
Sbjct: 151 AVVVVMVFFPV--------LVNTVAGLRETDQMQRDLMQTYAASYWQSFFKLRLPAALPF 202

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P  G+G  I+ ++ +  L  +   +L     
Sbjct: 203 IFNGLKIATTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEILVAALA 257

Query: 252 IFLYD---QLLFRPMIVWSNKFR 271
              +     L+ + +  W    R
Sbjct: 258 GSAFYGGMVLIEKTLTFWHPSQR 280


>gi|167750629|ref|ZP_02422756.1| hypothetical protein EUBSIR_01606 [Eubacterium siraeum DSM 15702]
 gi|167656308|gb|EDS00438.1| hypothetical protein EUBSIR_01606 [Eubacterium siraeum DSM 15702]
          Length = 267

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 5/245 (2%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
            P +F  L F L    +   L    E  +P        I  +  ++    + T +  L  
Sbjct: 15  LPVLFGALIFTLWQTKVLHALFKTDEIILPLPTRIGSIIGDNFTNMLPQIASTLIVALGG 74

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +V+  +  +      A  ++ GM  + I+    +IP++        +  +L     I + 
Sbjct: 75  LVLGSILGYFIGVAGAVFKKWGMGGLTIVSAFNAIPLVALAPVINNWTRDLSGVVDIRST 134

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +A I  +      +M+ + Y+ L  +    E++  S+  S  + F+ L +P S+P +   
Sbjct: 135 VAKIITVTIFCTASMSVNAYRGLTEVKPFSEDLFASYGSSKLKMFFKLRLPNSLPYVFTA 194

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S+       V  E          + G+G  I   I +         +     +  L 
Sbjct: 195 LRVSVPSCIIGAVVCEYFA-----EQVIGVGRQIRENIVKGQFPTAWAYITIACVMGILM 249

Query: 256 DQLLF 260
             +L 
Sbjct: 250 YIILL 254



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 9/199 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     T+   +  +++ SI+   +G+                    A P     P++ 
Sbjct: 60  MLPQIASTLIVALGGLVLGSILGYFIGVAGAVFKKWGMGGLTIVSAFNAIPLVALAPVIN 119

Query: 439 SCV----SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +          +   +   + +       +  N   G +      +++ +S+  +  + +
Sbjct: 120 NWTRDLSGVVDIRSTVAKIITVTIFCTASMSVNAYRGLTEVKPFSEDLFASYGSSKLKMF 179

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   PY  T    +       ++V E  +      +  G+G  I E+  KG FP 
Sbjct: 180 FKLRLPNSLPYVFTALRVSVPSCIIGAVVCEYFA-----EQVIGVGRQIRENIVKGQFPT 234

Query: 555 VVLGVLIMCCFVLALNRFL 573
               + I C   + +   L
Sbjct: 235 AWAYITIACVMGILMYIIL 253


>gi|296333344|ref|ZP_06875797.1| phosphate ABC transporter [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675151|ref|YP_003866823.1| phosphate ABC transporter [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149542|gb|EFG90438.1| phosphate ABC transporter [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413395|gb|ADM38514.1| phosphate ABC transporter [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 294

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +LV     I+++G+ + +          I      +      +   +   M+I++ 
Sbjct: 20  IIAAILVGLFSYIIINGVSQLSFDFITTKSSAIA-AGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+   + R+   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVFMAEYAPNNRVTDFIRTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      ++ ++P+DL+E S +  +S W     + +P ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 19/147 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F    ++ I  +I IP+G+  G           ++  I+   ++L++ P+     +V+ 
Sbjct: 62  LFNSFYILFITMLITIPLGVGGGVFMAEYAPNNRVTDFIRTCIEVLSSLPS-----IVIG 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWR 492
                           +I G     +FN             + P D KE + +  ++ W 
Sbjct: 117 MFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVRVTEDAIRSVPKDLKEASLALGVSRWH 176

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN 519
             + +++P   P  +TGAI A G  + 
Sbjct: 177 TVKTVLIPSAIPSIITGAILASGRVFG 203


>gi|218659495|ref|ZP_03515425.1| taurine ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 175

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 8/177 (4%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R  FP+   +  +       L   W      V   +  Q          +     +    
Sbjct: 7   RLRFPQPSWRWAALP----FLLTVWCLAASRVPSYVLPQPWEVAAEGLRWIQSGELGRQF 62

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R      +A +  + +G+  G         QP   L  A P   + PL +     
Sbjct: 63  LASLSREFGGFGVAILAALAIGVSAGLWRPFREFAQPLLALFMAIPPIAWAPLSLIFFGL 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +L+    +++++   + + +   +  G  +  +        F    ++   Y+  P
Sbjct: 123 GYLS----IAVVIFIASAFPMAVTIQEGVRSIGSGEVRAGPHFSAKRFQLLAYVYFP 175



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 56/175 (32%), Gaps = 10/175 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           R     +   A   ++ +  +    +       P ++       +    L +    +  R
Sbjct: 9   RFPQPSWRWAALPFLLTVWCLAASRVPSYVLPQPWEVAAEGLRWIQSGELGRQFLASLSR 68

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
                 +++L        A   R       P+L +  +IP + +   ++++F   Y    
Sbjct: 69  EFGGFGVAILAALAIGVSAGLWRPFREFAQPLLALFMAIPPIAWAPLSLIFFGLGY---- 124

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               L+    IF +  + M  ++ + + +I          F    +Q   Y+  P
Sbjct: 125 ----LSIAVVIFIASAFPMAVTIQEGVRSIGSGEVRAGPHFSAKRFQLLAYVYFP 175


>gi|903305|dbj|BAA09583.1| ORF73 [Bacillus subtilis]
 gi|1303856|dbj|BAA12512.1| YqgI [Bacillus subtilis]
          Length = 294

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +LV     I+++G+ + +          I      +      +   +   M+I++ 
Sbjct: 20  IIAAILVGLFSYIIINGVSQLSFQFITTKSSAIA-AGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+   + ++   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVFMAEYAPNNKVTDFIRTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      ++ ++P+DL+E S +  +S W     + +P ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 19/147 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F    ++ I  +I IP+G+  G           ++  I+   ++L++ P+     +V+ 
Sbjct: 62  LFNSFYILFITMLITIPLGVGGGVFMAEYAPNNKVTDFIRTCIEVLSSLPS-----IVIG 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWR 492
                           +I G     +FN             + P D KE + +  ++ W 
Sbjct: 117 MFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVRVTEDAIRSVPKDLKEASLALGVSRWH 176

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN 519
             + +++P   P  +TGAI A G  + 
Sbjct: 177 TVKTVLIPSAIPSIITGAILASGRVFG 203


>gi|84503013|ref|ZP_01001115.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
 gi|84388758|gb|EAQ01629.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
          Length = 305

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 70/192 (36%), Gaps = 9/192 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I  +   + A     SR + M ++P     Q+IPIL  
Sbjct: 96  TSKRSLVFHGWVTLSATLVGFGIGAVAGVLLAVGIVHSRAMDMSVMPWAIASQTIPILAI 155

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M + L +      ++ R++  S
Sbjct: 156 APMIIVVLNSVGVQGLVPKAIISAYLSF----FPVVVGMVKGLRSPTPMDLDLMRTWNAS 211

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q F  L +P S+P L  ++ + ++      +  E+           G+G+ +      
Sbjct: 212 RDQTFRKLRLPASVPYLFASLKIGIAASLVGAIVGEL-----PTGAARGLGARLLSGSYY 266

Query: 236 QDLLAILYAMLT 247
              + I  A+  
Sbjct: 267 GQTVQIWSALFA 278



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 73/184 (39%), Gaps = 5/184 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G +T+   +V   I ++  + + + I     +   + P+A      P     P++
Sbjct: 100 SLVFHGWVTLSATLVGFGIGAVAGVLLAVGIVHSRAMDMSVMPWAIASQTIPILAIAPMI 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   +   +  +++  + + + ++  ++ G  +      ++  +++ +  + +R +
Sbjct: 160 IVVLNSVGVQGLVPKAIISAYLSFFPVVVGMVKGLRSPTPMDLDLMRTWNASRDQTFRKL 219

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 220 RLPASVPYLFASLKIGIAASLVGAIVGELPTGA-----ARGLGARLLSGSYYGQTVQIWS 274

Query: 558 GVLI 561
            +  
Sbjct: 275 ALFA 278


>gi|306838859|ref|ZP_07471689.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
 gi|306406057|gb|EFM62306.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. NF 2653]
          Length = 403

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|256397362|ref|YP_003118926.1| phosphate ABC transporter inner membrane subunit PstC
           [Catenulispora acidiphila DSM 44928]
 gi|256363588|gb|ACU77085.1| phosphate ABC transporter, inner membrane subunit PstC
           [Catenulispora acidiphila DSM 44928]
          Length = 694

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 74/517 (14%), Positives = 161/517 (31%), Gaps = 75/517 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF---------- 115
            L    I+++     A   +        RRL  VL  I+D++ ++P + +          
Sbjct: 96  TLVTSTIAIVIAAPVAIGVSLFITQYAPRRLAQVLGYIVDLLAAVPSIVYGLWGILFLVP 155

Query: 116 -------LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEE 167
                      V+ ++ ++   + G  +     I    +  +  ++  +     PR+  E
Sbjct: 156 HMQGASQFVSDVLGWIPMFSSGIFGRSVFTAGVILAIMILPIIAAISREVFLQTPREQVE 215

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-- 225
            + +   + W+      +P+   G+   +++         VA  M++          +  
Sbjct: 216 AAYALGATRWEMIKLAVLPYGRSGVGSAIVLGFGRALGETVAVAMVLSVSYNFVTKWLQP 275

Query: 226 -GSYIALAIKEQ-------DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN--------K 269
            G+ IA  I  Q          A++ + L +  V FL + LL R +   ++         
Sbjct: 276 GGNTIAANIALQFSNAFKTGQGALIASGLVLFVVTFLVN-LLARRITARADIPKDERWSL 334

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFL----------------------------RFIGYS 301
           F + R        S    +   +                                    +
Sbjct: 335 FSVFRGRSGRAGGSEATSVAIASGTAITGAAEVPDGRGAFEAKDTPGEVAADDTAGRSRT 394

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
                  +   V     T   IR  F            V  +L I W  V  G     A 
Sbjct: 395 RRAAHGTIGGGVLIPPSTPRRIRSGFAGGATVATFVLAVLPLLSILWLVVSKGTKALNAE 454

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--ISSKIQ 419
                + N    Q    V      T+ +  +  ++A  I I V +++       ++  + 
Sbjct: 455 FLTHSLRNISEDQTGGGVYHAILGTLEQAGLATLMAVPIGILVAVYLVEYGKGMLAKSVT 514

Query: 420 PFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            F  ++   P+ V   F L +  ++ +     L  +L ++      ++ +        P+
Sbjct: 515 FFVDVMMGLPSIVAGLFILSLWIITLHQYQNGLAGALALMILMLPVVIRSSEEMLKLVPD 574

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +E + +  +  WR    +++P   P  +TG +   
Sbjct: 575 SLREASYALGVPKWRTITRVVIPTALPGIITGVMLGV 611


>gi|242280833|ref|YP_002992962.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
 gi|242123727|gb|ACS81423.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 571

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 73/519 (14%), Positives = 162/519 (31%), Gaps = 61/519 (11%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTF-----TVVYFM 124
            + A ++      +      + R+      ++P++ I   I  L ++        ++ F+
Sbjct: 80  TMLATLLGSAMGLLVGLTDIRFRKALTFCFMMPMM-IPPQITALSWIQLFGPSSVLLNFL 138

Query: 125 NLYPGKVIGAELAAIFAIFTS----QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            + P       + + F I       Q   +  S+   L  +PR++ E +R       +  
Sbjct: 139 GIAPAPGTPHPMYSPFGIILLLGIQQAPLIFLSLKAGLAAMPREMVEAARVCGAGNSRVL 198

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P   P L   M ++                  + I   GI + + +      L  
Sbjct: 199 RDIVLPLMTPALTAGMALAF----------------VSCIGNFGIPAMLGIPAGYTVLTT 242

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300
           ++Y  L M G                              + S ++ +      L     
Sbjct: 243 LIYQRLAMFG----------------------PEVIAEAASLSVLISMLALFGILLQSYM 280

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
            +   +  +    + L   LG +R         +     V  +  +F+  ++    + + 
Sbjct: 281 LNRRDYRLVGAPSELLKYRLGKLRSLAEFASWMVILLVLVIPLCALFFSSLIPSFGVELN 340

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQ 419
            +++ +                   +        +I  ++ IP+G ++ ++   +   + 
Sbjct: 341 AETMTFSNYFNVLFKHDATTRAFINSFSLAGGAALILCLVGIPLGYFLVWQKNSLLRFMS 400

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNL----WLSLLMIFGTQWYI-LFNVIAGASA 474
           P  +L  A P  V     +          ++    W+ L+        + L  VI G + 
Sbjct: 401 PLMELPYALPGVVLAIGCILLFLKPVFGVSIYGTVWIILVAYLARFLPMGLRPVIGGFTQ 460

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +E A       +R  + II+P I P   TG +     A+N   VS +        
Sbjct: 461 TDRVLEEAAQMCGAGFFRRMKDIIVPLIMPAAATGGLFIFLAAFNELTVSVLLWSSGSET 520

Query: 535 RTTGLGAYIAESTEKGSFPEV-VLGVLIMCCFVLALNRF 572
               LG  I    E G+      + +L++   +L +   
Sbjct: 521 ----LGVVIFNLDESGNAVLASAVSILVIVAVLLLMTVL 555



 Score = 37.2 bits (85), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 18/172 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPA----NVFFPLVV-- 438
           T+F      ++A+++   +G+ +G         +     +    P       +  L    
Sbjct: 72  TIFVGGCATMLATLLGSAMGLLVGLTDIRFRKALTFCFMMPMMIPPQITALSWIQLFGPS 131

Query: 439 -SCVSYYHLNPN----------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
              +++  + P             + LL+       I  ++ AG +A P +  E A    
Sbjct: 132 SVLLNFLGIAPAPGTPHPMYSPFGIILLLGIQQAPLIFLSLKAGLAAMPREMVEAARVCG 191

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
               R  R I+LP + P    G   A         +  +      +   T L
Sbjct: 192 AGNSRVLRDIVLPLMTPALTAGMALAFVSCIGNFGIPAMLGIPAGYTVLTTL 243


>gi|306844873|ref|ZP_07477455.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
 gi|306274702|gb|EFM56486.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO1]
          Length = 403

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|209883203|ref|YP_002287060.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209871399|gb|ACI91195.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 255

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 14/222 (6%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++     +D   +      T+   +   + A +  I + +       +     P+A +L 
Sbjct: 37  LILETLVRDWALLFASLLATLRATLEGFLAAVVGGIGLALLFSRAKWVEDAFLPYAVILQ 96

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL++      +L  +L +         + +L N + G  +   +   + + +
Sbjct: 97  VTPVIAIAPLLLV-----YLPQHLAVVACAWIVAFFPVLSNTLLGLKSVDRNLAGLFALY 151

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +    + LP   PY + G   A G +   ++V+E+A+          L   IAE+
Sbjct: 152 DASPAQKLWRLRLPSALPYIMGGLRIAGGLSLIGAVVAEIAAGSAGSGSG--LAFRIAEA 209

Query: 547 TEKGSFPEVVLGVLIMCCFVL-------ALNRFLWHPLYLYG 581
             +   P +   + ++    +       AL+R +    +   
Sbjct: 210 GYRLDIPRMFAALALLSAAGIVIYAGLSALSRLVLRRWHESA 251



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 83/236 (35%), Gaps = 14/236 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVIS 79
           L   +V+  I   +  ++E          + +     D   L      T    L   + +
Sbjct: 8   LVVFVVVAGIWEAVVRLREIPPYILPAPSLILETLVRDWALLFASLLATLRATLEGFLAA 67

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           ++     A L ++++ +    +P   I+Q  P++      +VY         +   LA +
Sbjct: 68  VVGGIGLALLFSRAKWVEDAFLPYAVILQVTPVIAIAPLLLVY---------LPQHLAVV 118

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              +    + +  +    L ++ R+L  +   +  S  QK W L +P ++P ++  + ++
Sbjct: 119 ACAWIVAFFPVLSNTLLGLKSVDRNLAGLFALYDASPAQKLWRLRLPSALPYIMGGLRIA 178

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                   V +E+            +   IA A    D+  +  A+  +     + 
Sbjct: 179 GGLSLIGAVVAEIAAGSAGSGSG--LAFRIAEAGYRLDIPRMFAALALLSAAGIVI 232


>gi|221639620|ref|YP_002525882.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides KD131]
 gi|332558605|ref|ZP_08412927.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides WS8N]
 gi|221160401|gb|ACM01381.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides KD131]
 gi|332276317|gb|EGJ21632.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides WS8N]
          Length = 287

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L    I      + A     +R +   ++P     Q+IPIL  
Sbjct: 78  TSKRSLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +   M + L +      ++  ++  S
Sbjct: 138 APMIIVVLNSIGVSGLLPKAVISAYLSF----FPVVVGMVKGLRSPDAMQLDLLSTYNAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 194 RAQAFWKLRLPASMPYLFASLKVGIAASLVGAIVGEL-----PTGAVAGLGARLLSGSYY 248

Query: 236 QDLLAIL 242
              + I 
Sbjct: 249 GQTIQIW 255



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 73/179 (40%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++ G IT+   ++   I + + I + + I     +   + P+A      P     P++
Sbjct: 82  SLVYHGWITLSATLLGFGIGTGLGILLAVGIIHNRAMDQSVMPWAIASQTIPILAIAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++  + + + ++  ++ G  +      ++ S+++ +  + +  +
Sbjct: 142 IVVLNSIGVSGLLPKAVISAYLSFFPVVVGMVKGLRSPDAMQLDLLSTYNASRAQAFWKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 202 RLPASMPYLFASLKVGIAASLVGAIVGELPTGA-----VAGLGARLLSGSYYGQTIQIW 255


>gi|228983915|ref|ZP_04144108.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229154416|ref|ZP_04282535.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           ATCC 4342]
 gi|228629064|gb|EEK85772.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           ATCC 4342]
 gi|228775828|gb|EEM24201.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 297

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGAVIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|228919566|ref|ZP_04082930.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|229028515|ref|ZP_04184635.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1271]
 gi|228732828|gb|EEL83690.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           AH1271]
 gi|228840209|gb|EEM85486.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 297

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAVSR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAVSRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|281357258|ref|ZP_06243747.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
 gi|281316289|gb|EFB00314.1| binding-protein-dependent transport systems inner membrane
           component [Victivallis vadensis ATCC BAA-548]
          Length = 555

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/385 (14%), Positives = 114/385 (29%), Gaps = 33/385 (8%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   +  F         +  ++  +L N+   L E +R+   S W +F  + +P   PG+
Sbjct: 135 GRFWSVCFIEALHLYPILYLNLVTALGNLDPQLNEAARNLGASWWTRFRRITLPLMKPGI 194

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                 S+   W F      ++ G   +    I + I          A++  ML    V+
Sbjct: 195 FAGG--SIVLVWSFTELGTPLMFGFNRVTAVQIFNGIMELETNPVPYALVVVMLFFAAVM 252

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312
           +L  + +       ++  +    +   P   W      +      +        +     
Sbjct: 253 YLAGKFVLGRNAA-NSTVKGNAGSAARPPAGW------RRFLPTGVFALVTLLAALPHIA 305

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +     +L      +PE+F  L     +S  + I         ++     ++   V    
Sbjct: 306 LIFTAFSLRWYGTVWPEHFTLLNFENALSNKIVIPSIVNSLRYSVLAMLVAVAAGVLISL 365

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 +       +  ++ L +   ++              +    P            
Sbjct: 366 AAVRWKLRGSSFADLLAMLPLAVPGIVVAFGFLGMSVKYDWAAEWFNPV----------- 414

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
                         NP   L++        Y++ +V AG    P + +  A ++    WR
Sbjct: 415 -------------ENPLWLLAVAYAVRRLPYVVRSVSAGLEQTPEELENAARNYGAGPWR 461

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
             R I LP I    + G + A   +
Sbjct: 462 VLRKITLPLILANVIVGGLFAFSFS 486



 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 3/135 (2%)

Query: 443 YYHLNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +       W    +     + IL  N++           E A +   + W  +R I LP 
Sbjct: 130 FLGGRGRFWSVCFIEALHLYPILYLNLVTALGNLDPQLNEAARNLGASWWTRFRRITLPL 189

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + P    G        W+ + +     +G   +    +   I E         +V+ +L 
Sbjct: 190 MKPGIFAGGSIVL--VWSFTELGTPLMFGFNRVTAVQIFNGIMELETNPVPYALVVVMLF 247

Query: 562 MCCFVLALNRFLWHP 576
               +    +F+   
Sbjct: 248 FAAVMYLAGKFVLGR 262



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 2/150 (1%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGFLTFTVVY-FM 124
            + L ML A+   +L +        +      +L  + L +   +   GFL  +V Y + 
Sbjct: 348 YSVLAMLVAVAAGVLISLAAVRWKLRGSSFADLLAMLPLAVPGIVVAFGFLGMSVKYDWA 407

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +   V         A    ++  +  S+   L   P +LE  +R++    W+    + 
Sbjct: 408 AEWFNPVENPLWLLAVAYAVRRLPYVVRSVSAGLEQTPEELENAARNYGAGPWRVLRKIT 467

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           +P  +  ++   + + S     V  S ++ 
Sbjct: 468 LPLILANVIVGGLFAFSFSMLEVSDSLILA 497


>gi|27468933|ref|NP_765570.1| opuCD protein [Staphylococcus epidermidis ATCC 12228]
 gi|27316481|gb|AAO05656.1|AE016750_261 opuCD protein [Staphylococcus epidermidis ATCC 12228]
          Length = 231

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK +RL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  +   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|291562280|emb|CBL41096.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [butyrate-producing bacterium SS3/4]
          Length = 327

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 84/202 (41%), Gaps = 16/202 (7%)

Query: 74  SAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++I+  F+   A        +       P+++I   IP + +    LT  V     L+
Sbjct: 89  LALLIATPFSLGSAIFITEISPKFGEKFYRPVVEIFAGIPSVVYGWVGLTVLVPAIKTLF 148

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +       +T     +L ++P++    +     + WQ  + + VP 
Sbjct: 149 DRQVGHSILAAGLVLAVMIFPTITSVAADALHSVPKECRMAAYGLGSTRWQTIYRIVVPA 208

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSYIALAIKEQD 237
           + PG++  +++ ++  +   +A  M++   T +P             I + +  A++  +
Sbjct: 209 AAPGIISGVILGLARAFGEALAVAMVIGQTTALPTSIFSTTKTLTTEIAAQMGNAMEGGE 268

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           + + L+ M  +L  I L+   L
Sbjct: 269 MKSALWTMALLLFAISLFFIFL 290



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANV--FFPLVVSCVS 442
           +    +A +I  P  +G  I              +P  ++ A  P+ V  +  L V   +
Sbjct: 84  LCTCGLALLIATPFSLGSAIFITEISPKFGEKFYRPVVEIFAGIPSVVYGWVGLTVLVPA 143

Query: 443 YYHL-----NPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRY 496
              L       ++  + L++    +  + +V A    + P + +  A     T W+    
Sbjct: 144 IKTLFDRQVGHSILAAGLVLAVMIFPTITSVAADALHSVPKECRMAAYGLGSTRWQTIYR 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           I++P   P  ++G I     A+  ++   +       L T+
Sbjct: 204 IVVPAAAPGIISGVILGLARAFGEALAVAMVIGQTTALPTS 244


>gi|325844364|ref|ZP_08168119.1| phosphate ABC transporter, permease protein PstA [Turicibacter sp.
           HGF1]
 gi|325489169|gb|EGC91552.1| phosphate ABC transporter, permease protein PstA [Turicibacter sp.
           HGF1]
          Length = 389

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            L  + ++LLF      LAA       K  +L  ++    +++  IP + F  F ++ F+
Sbjct: 171 TLMLIAVALLFAAPIGILAAIYMVEYAKPGKLVNMIRFATEVLSGIPSVVFGLFGMLIFV 230

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N +  K+  + L+    +    +  M  +  ++L ++P    E S     +  Q    + 
Sbjct: 231 NTF--KLGMSILSGGLTLMILLLPTMMRTTEEALKSVPMSYREASYGLGANKIQTLSKVV 288

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PG++  +++S+ 
Sbjct: 289 LPSAIPGILVGVILSIG 305



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF 433
             +  +   T+  + V ++ A+ I I   I++         +       ++L+  P+ VF
Sbjct: 162 GGIFPMIVSTLMLIAVALLFAAPIGILAAIYMVEYAKPGKLVNMIRFATEVLSGIPSVVF 221

Query: 434 FPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGW 491
               +      + L  ++    L +       +         + P  ++E +        
Sbjct: 222 GLFGMLIFVNTFKLGMSILSGGLTLMILLLPTMMRTTEEALKSVPMSYREASYGLGANKI 281

Query: 492 RWWRYIILPGIFPYYVTGAITACG 515
           +    ++LP   P  + G I + G
Sbjct: 282 QTLSKVVLPSAIPGILVGVILSIG 305


>gi|254705398|ref|ZP_05167226.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
          Length = 403

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|229159795|ref|ZP_04287803.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           R309803]
 gi|228623732|gb|EEK80550.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           R309803]
          Length = 297

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAVSR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAVSRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|294501603|ref|YP_003565303.1| putative ABC transporter permease [Bacillus megaterium QM B1551]
 gi|294351540|gb|ADE71869.1| putative ABC transporter, permease protein [Bacillus megaterium QM
           B1551]
          Length = 239

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +  I L   SL ++   T    +   ++  L   + AT    S RL  +L P
Sbjct: 26  SSPTKVWHLFLIKLADGSLAEHIGFTLFETVLGFILGTLLGILLATALWYSTRLANILDP 85

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 86  YLVILNAMPKVALGPILIVAIGPGFFSILTMGTIISVIITSIV--------VYTAFKEVD 137

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ +SF  +  + F    +P SMP ++    +++   W  V+  E +V        
Sbjct: 138 PNYIKLLKSFGATKTRCFKEAILPASMPAIISTFKVNVGLSWVGVIVGEFLVSSK----- 192

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +L ++L +     +  Q
Sbjct: 193 -GLGYMIIYGFQVFNFTLVLLSLLLIAIFATIMYQ 226



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
             T+F  V+  I+ +++ I +   + +   +++ + P+  +L A P     P+++  +  
Sbjct: 49  GFTLFETVLGFILGTLLGILLATALWYSTRLANILDPYLVILNAMPKVALGPILIVAIGP 108

Query: 443 -YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            ++ +     +  ++I     Y  F           ++ ++  SF  T  R ++  ILP 
Sbjct: 109 GFFSILTMGTIISVIITSIVVYTAF------KEVDPNYIKLLKSFGATKTRCFKEAILPA 162

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  ++      G +W   IV E        + + GLG  I    +  +F  V+L +L+
Sbjct: 163 SMPAIISTFKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLVLLSLLL 216

Query: 562 MCCFVLAL 569
           +  F   +
Sbjct: 217 IAIFATIM 224


>gi|297619119|ref|YP_003707224.1| phosphate ABC transporter inner membrane subunit PstA
           [Methanococcus voltae A3]
 gi|297378096|gb|ADI36251.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanococcus voltae A3]
          Length = 335

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 14/162 (8%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            LS + +S++F   +  L+A       K  +L  +++   D +  +P + F       F 
Sbjct: 121 TLSLVALSIVFAVPFGVLSAIYLYEYAKDSKLSQIVIFSSDCLAGLPSIVF-----GIFG 175

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                K IG  L     I +  +  +   +  + L ++P D+ + S +   S WQ    +
Sbjct: 176 YAIAIKTIGPSLLVGGIILSFMILPIIIKATEEGLKSVPSDIRDGSLALGASKWQTIRQI 235

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            VP +MP ++  ++++M        A+ M           G+
Sbjct: 236 VVPSAMPQIITGVILAMGRS-AEETAAVMFTAATIYASGFGL 276



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            +  +    Q++++ +       V G+   + W  +   ++  +   +  +      T+ 
Sbjct: 64  SHAQKRKLEQKIAFSIFYLCGFSVLGILFFMIWHIVSNGISVISLSFIASIYNAIIGTLS 123

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVFFPLVVSCV 441
            V     ++ +  +P G+      +  +K    +Q+       LA  P+ V F +    +
Sbjct: 124 LVA----LSIVFAVPFGVLSAIYLYEYAKDSKLSQIVIFSSDCLAGLPSIV-FGIFGYAI 178

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   + P+L +  +++      I+      G  + P+D ++ + +   + W+  R I++P
Sbjct: 179 AIKTIGPSLLVGGIILSFMILPIIIKATEEGLKSVPSDIRDGSLALGASKWQTIRQIVVP 238

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              P  +TG I A G +   +  + + +   I+    GL
Sbjct: 239 SAMPQIITGVILAMGRSAEET-AAVMFTAATIYASGFGL 276


>gi|89052799|ref|YP_508250.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88862348|gb|ABD53225.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 511

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 19/234 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH----SLPQYASRTTLRMLSAMV 77
           +   V+  G + IL         P ++ D + +  D      +L +    T + +L    
Sbjct: 267 VALLVIWWGGLQILNVSPFFAKGPAEVFDALFLAPDAGVVRATLMEALGETAVFLLPGYA 326

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
             +    + A L      L    +P+   ++S+PI+      V++      G ++   + 
Sbjct: 327 AGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVPIITTAPLVVLFTGRGAVGTIVLVAIM 386

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F  F + +          L   P  + +V RS+  S +     + VP  +P       
Sbjct: 387 VFFPTFVACL--------HGLRQAPGRVIDVMRSYAASPFDVLTRVRVPAMLPAFFAAAR 438

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           M++      V   E +  G+      GIGS +AL+  + D   +L++ + ++ V
Sbjct: 439 MNVPASVLAVTVVEWLATGN------GIGSLMALSASQSDYD-MLWSSVVLVAV 485



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 87/308 (28%), Gaps = 25/308 (8%)

Query: 273 ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL 332
           E T          +   R  N       +       +             +R   P    
Sbjct: 189 EFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLRDEPPVILA 248

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV-----------NHFTYQDVLYVIW 381
                +R +  + +    V   V      Q +                 F   D   V  
Sbjct: 249 PPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLAPDAGVVRA 308

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGF----RPHISSKIQPFAQLLAAFPANVFFPLV 437
                +    V ++      I VG  +       P ++    P A  L + P     PLV
Sbjct: 309 TLMEALGETAVFLLPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVPIITTAPLV 368

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V       +   + +++++ F          + G    P    +V  S+  + +     +
Sbjct: 369 VLFTGRGAVGTIVLVAIMVFF----PTFVACLHGLRQAPGRVIDVMRSYAASPFDVLTRV 424

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +P + P +   A      +  A  V E  + G+      G+G+ +A S  +  +  +  
Sbjct: 425 RVPAMLPAFFAAARMNVPASVLAVTVVEWLATGN------GIGSLMALSASQSDYDMLWS 478

Query: 558 GVLIMCCF 565
            V+++   
Sbjct: 479 SVVLVAVL 486


>gi|221310421|ref|ZP_03592268.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314744|ref|ZP_03596549.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319667|ref|ZP_03600961.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323944|ref|ZP_03605238.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767564|ref|NP_390376.2| phosphate ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321311981|ref|YP_004204268.1| phosphate ABC transporter [Bacillus subtilis BSn5]
 gi|251757387|sp|P46340|YQGI_BACSU RecName: Full=Probable ABC transporter permease protein yqgI
 gi|225185192|emb|CAB14427.2| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291484943|dbj|BAI86018.1| phosphate ABC transporter, permease [Bacillus subtilis subsp. natto
           BEST195]
 gi|320018255|gb|ADV93241.1| phosphate ABC transporter [Bacillus subtilis BSn5]
          Length = 294

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +LV     I+++G+ + +          I      +      +   +   M+I++ 
Sbjct: 20  IIAAILVGLFSYIIINGVSQLSFQFITTKSSAIA-AGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+   + ++   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVFMAEYAPNNKVTDFIRTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      ++ ++P+DL+E S +  +S W     + +P ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 19/147 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F    ++ I  +I IP+G+  G           ++  I+   ++L++ P+     +V+ 
Sbjct: 62  LFNSFYILFITMLITIPLGVGGGVFMAEYAPNNKVTDFIRTCIEVLSSLPS-----IVIG 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWR 492
                           +I G     +FN             + P D KE + +  ++ W 
Sbjct: 117 MFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVRVTEDAIRSVPKDLKEASLALGVSRWH 176

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN 519
             + +++P   P  +TGAI A G  + 
Sbjct: 177 TVKTVLIPSAIPSIITGAILASGRVFG 203


>gi|242279346|ref|YP_002991475.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
 gi|242122240|gb|ACS79936.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 260

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 108/260 (41%), Gaps = 23/260 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYA 65
            F S  + P+ +++L F+L+I     L        V   +  +  +     D   L  + 
Sbjct: 3   DFRSVELPPSFYNILGFMLLILGWEALARNYSGLVVATPVETMSALFRLLGDKGFLMTHL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T  R+  ++ I +    V   LA     L ++L PI  I+ SIP +  +   +++F  
Sbjct: 63  VPTLKRIALSLCIGIGSGAVLGVLAGLIEPLRLMLAPIRWILTSIPGIIVVVVFMLWF-- 120

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G     + +I ++ +  + + ++ +S+ N+  +L E++R +R+    +   + 
Sbjct: 121 -------GMGTTMVVSITSTMIAPIVYVNVAESMMNVDSNLIEMARVYRMPLHMRLTRIY 173

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
                  L+  ++++       VV +EM+          G+G   ALAI   +L      
Sbjct: 174 AMALARPLLSAVVIATGNCIRLVVLAEMLGTNK------GLGH--ALAISRTNLQTDSLY 225

Query: 245 MLTMLGVIFL--YDQLLFRP 262
            LTML +I +   +  + RP
Sbjct: 226 ALTMLAMIIIGGVEIFMLRP 245



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 65/212 (30%), Gaps = 10/212 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             D  +++     T+ R+ + + I       +G+  G    +   + P   +L + P  +
Sbjct: 52  LGDKGFLMTHLVPTLKRIALSLCIGIGSGAVLGVLAGLIEPLRLMLAPIRWILTSIPGII 111

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              + +              S ++       +  NV        ++  E+A  + +    
Sbjct: 112 VVVVFMLWFGMGTTMVVSITSTMIAPI----VYVNVAESMMNVDSNLIEMARVYRMPLHM 167

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I    +    ++  + A G      +++E+           GLG  +A S      
Sbjct: 168 RLTRIYAMALARPLLSAVVIATGNCIRLVVLAEMLG------TNKGLGHALAISRTNLQT 221

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             +    ++    +  +  F+  P      R 
Sbjct: 222 DSLYALTMLAMIIIGGVEIFMLRPARKAIERK 253


>gi|309791428|ref|ZP_07685935.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
 gi|308226561|gb|EFO80282.1| binding-protein-dependent transport systems inner membrane
           component [Oscillochloris trichoides DG6]
          Length = 208

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 86/206 (41%), Gaps = 16/206 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                  LSA++I+         + ++   L   ++ IL I+ +IP L  L   + +   
Sbjct: 16  LEHLWLTLSALLIATAIALPVGVILSRVAWLRTPVLGILGIIYTIPSLSLLVLLIPFLR- 74

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                 +G   A +  I  +Q+  +  S+   +  I   + E ++   ++ WQ+   + +
Sbjct: 75  ------LGYRPALVTLIAYAQLV-LVRSVVVGINGIEPAIIEAAKGMGMNSWQRLLRVEL 127

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + ++        +++  I      +   G+G+ +   ++  +   I+   
Sbjct: 128 PLALPVMIAGLRVA-------TLSTIAIATVAAFVNAGGLGTLLFDGVRSSNSEKIIAGA 180

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +++  +    + +LFR   +W+ + R
Sbjct: 181 ISVSLLAVAAN-ILFRRAEIWATRSR 205



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 75/205 (36%), Gaps = 11/205 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +   +  YV  L    ++  +  ++IA+ I +PVG+ +     + + +     ++   P+
Sbjct: 3   YLIANWPYVGELFLEHLWLTLSALLIATAIALPVGVILSRVAWLRTPVLGILGIIYTIPS 62

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L++  +   +        + +I   Q  ++ +V+ G +       E A    +  
Sbjct: 63  LSLLVLLIPFLRLGYR----PALVTLIAYAQLVLVRSVVVGINGIEPAIIEAAKGMGMNS 118

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    + LP   P  + G   A       + V+   + G       GLG  + +     
Sbjct: 119 WQRLLRVELPLALPVMIAGLRVATLSTIAIATVAAFVNAG-------GLGTLLFDGVRSS 171

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWH 575
           +  +++ G + +    +A N     
Sbjct: 172 NSEKIIAGAISVSLLAVAANILFRR 196


>gi|293374909|ref|ZP_06621207.1| phosphate ABC transporter, permease protein PstA [Turicibacter
           sanguinis PC909]
 gi|292646458|gb|EFF64470.1| phosphate ABC transporter, permease protein PstA [Turicibacter
           sanguinis PC909]
          Length = 389

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            L  + ++LLF      LAA       K  +L  ++    +++  IP + F  F ++ F+
Sbjct: 171 TLMLIAVALLFAAPIGILAAIYMVEYAKPGKLVNMIRFATEVLSGIPSVVFGLFGMLIFV 230

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N +  K+  + L+    +    +  M  +  ++L ++P    E S     +  Q    + 
Sbjct: 231 NTF--KLGMSILSGGLTLMILLLPTMMRTTEEALKSVPMSYREASYGLGANKIQTLSKVV 288

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PG++  +++S+ 
Sbjct: 289 LPSAIPGILVGVILSIG 305



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF 433
             +  +   T+  + V ++ A+ I I   I++         +       ++L+  P+ VF
Sbjct: 162 GGIFPMIVSTLMLIAVALLFAAPIGILAAIYMVEYAKPGKLVNMIRFATEVLSGIPSVVF 221

Query: 434 FPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGW 491
               +      + L  ++    L +       +         + P  ++E +        
Sbjct: 222 GLFGMLIFVNTFKLGMSILSGGLTLMILLLPTMMRTTEEALKSVPMSYREASYGLGANKI 281

Query: 492 RWWRYIILPGIFPYYVTGAITACG 515
           +    ++LP   P  + G I + G
Sbjct: 282 QTLSKVVLPSAIPGILVGVILSIG 305


>gi|156740605|ref|YP_001430734.1| phosphate ABC transporter inner membrane subunit PstA [Roseiflexus
           castenholzii DSM 13941]
 gi|156231933|gb|ABU56716.1| phosphate ABC transporter, inner membrane subunit PstA [Roseiflexus
           castenholzii DSM 13941]
          Length = 419

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 65/170 (38%), Gaps = 16/170 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   +   M++++    +        A       ++   ++ +  +P + +    +  F+
Sbjct: 192 SLWVIAITMLLAIPIGILGGVYLEEYASDTWYYRLIETNINNLAGVPSIIYGILGLAVFV 251

Query: 125 NLYPGKVIGAE-----------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                   GA            L+A   +    +  M  +  +++  +P+ + + S    
Sbjct: 252 RALEALTSGATFGVTDSNGRTILSAGLTMALLVLPLMIINAREAIRAVPQSIRQASYGLG 311

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            + WQ  W+  +P ++PG++   ++SMS        + +IVVG +   + 
Sbjct: 312 ATKWQTVWHHVLPNALPGILTGTILSMSRA--MGETAPLIVVGASTFVVF 359



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 25/180 (13%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------P 412
           +W +  ++    +   +L  +    +    V+    I  ++ IP+GI  G          
Sbjct: 165 SWINREFLTRPMSSSPILAGVGNAILGSLWVIA---ITMLLAIPIGILGGVYLEEYASDT 221

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSY----------YHLNPNLWLSLL-----MI 457
                I+     LA  P+ ++  L ++              + +  +   ++L     M 
Sbjct: 222 WYYRLIETNINNLAGVPSIIYGILGLAVFVRALEALTSGATFGVTDSNGRTILSAGLTMA 281

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++ N      A P   ++ +     T W+   + +LP   P  +TG I +   A
Sbjct: 282 LLVLPLMIINAREAIRAVPQSIRQASYGLGATKWQTVWHHVLPNALPGILTGTILSMSRA 341


>gi|15894755|ref|NP_348104.1| proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum ATCC 824]
 gi|15024421|gb|AAK79444.1|AE007658_14 Proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum ATCC 824]
 gi|325508893|gb|ADZ20529.1| Proline/glycine betaine ABC-type transport system, permease
           component [Clostridium acetobutylicum EA 2018]
          Length = 202

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L          ++  ++IS+    +   +A  SR L  +L+ +  ++ SIP L    
Sbjct: 9   WDKLGWALIEHLEIVIITLLISIFIASILTIIAIYSRILSEILIHVFSVVYSIPSLAL-- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                F  L P   +G   A I  I  +Q + +  +    L  +   + E +    ++  
Sbjct: 67  -----FAMLIPVSGLGKGTAIIVLIAYNQ-YLLLRNFIAGLNEVEPSIIEAATGMGMTNM 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P S   L   + +S       VV++  I      I   GIGS ++  ++  +
Sbjct: 121 QILFKIRLPLSKKALFTGVRLS-------VVSTIGIATIAAFINAGGIGSVLSDGLRTMN 173

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  I++  +    +    + +L
Sbjct: 174 VYEIVWGSILAASLAIGVNAIL 195



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              + W     +  V++ ++I+  I   + I   +   +S  +     ++ + P+   F 
Sbjct: 9   WDKLGWALIEHLEIVIITLLISIFIASILTIIAIYSRILSEILIHVFSVVYSIPSLALFA 68

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +++               +++I   Q+ +L N IAG +       E A+   +T  +   
Sbjct: 69  MLIPVSGLGKGT----AIIVLIAYNQYLLLRNFIAGLNEVEPSIIEAATGMGMTNMQILF 124

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I LP       TG   +       + ++   + G       G+G+ +++     +  E+
Sbjct: 125 KIRLPLSKKALFTGVRLSVVSTIGIATIAAFINAG-------GIGSVLSDGLRTMNVYEI 177

Query: 556 VLGVLIMCCFVLALNRFL 573
           V G ++     + +N  L
Sbjct: 178 VWGSILAASLAIGVNAIL 195


>gi|317470851|ref|ZP_07930232.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316901678|gb|EFV23611.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 266

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 64/175 (36%), Gaps = 15/175 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
           V   L ++ +R     + +++ + +IP +  L F + +               A+ A+  
Sbjct: 40  VVGILISEYQRYAKPALGLINFLYTIPSISMLGFLIPFSGIGN--------ATAVIALTV 91

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  M  + +  + NI   + E ++    +  Q  + + +P +MP ++  +        
Sbjct: 92  YALLPMVRNTHTGMSNIDEGILEAAKGMGSTRAQILFKIKLPLAMPVIMSGIR------- 144

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             V  +  +    + I   G+G  I   I   +    L   L +  +    D +L
Sbjct: 145 NMVTMTIALTGIASFIGAGGLGVAIYRGITTNNGAMTLAGSLLIALLALAMDFIL 199



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 11/148 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           VGI I      +         L   P+      ++      +    + L++  +      
Sbjct: 41  VGILISEYQRYAKPALGLINFLYTIPSISMLGFLIPFSGIGNATAVIALTVYALL----P 96

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++ N   G S       E A     T  +    I LP   P  ++G         N   +
Sbjct: 97  MVRNTHTGMSNIDEGILEAAKGMGSTRAQILFKIKLPLAMPVIMSGIR-------NMVTM 149

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +   +     +   GLG  I       +
Sbjct: 150 TIALTGIASFIGAGGLGVAIYRGITTNN 177


>gi|314934505|ref|ZP_07841864.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
 gi|313652435|gb|EFS16198.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus caprae C87]
          Length = 231

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK +RL   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPIITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +++ L    +   V  ++ A II IP+GI+I     +S  I   A ++   PA    
Sbjct: 16  NWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYKRLSWPIITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G     ++ K+      +TG +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDDNIKDAGKGMGMTGNQIL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|116492237|ref|YP_803972.1| ABC-type phosphate transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102387|gb|ABJ67530.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 302

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 11/167 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF--- 115
           A    +   S  V+S L    +A   A        +R   +L P+++++  IP + +   
Sbjct: 79  ALPMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKILQPVIELLVGIPSVVYGFI 138

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LT  V +   ++ G   G  L+  F +F   +  +T     SL  +P+   E S +   
Sbjct: 139 GLTVVVPFTRTVFGGTGFGI-LSGTFVLFVMVLPTVTSMYVDSLKAVPQFYREASLALGA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  + + +  S+PGL+  ++  M+  +   +A +M++   +++P
Sbjct: 198 TRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNASILP 244



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 62/173 (35%), Gaps = 9/173 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPA 430
            Q ++  + +   +    V+  ++A+   I   I++           +QP  +LL   P+
Sbjct: 73  PQALVGALPMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKILQPVIELLVGIPS 132

Query: 431 NVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVA 483
            V+  + ++ V       +      +     ++F      +    +    A P  ++E +
Sbjct: 133 VVYGFIGLTVVVPFTRTVFGGTGFGILSGTFVLFVMVLPTVTSMYVDSLKAVPQFYREAS 192

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +   T W+    +I+    P  +T  I     A+  ++  ++       L +
Sbjct: 193 LALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNASILPS 245


>gi|239622349|ref|ZP_04665380.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239514346|gb|EEQ54213.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 335

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALFDNIATVFSYQDGIFGRWL-LNTLLYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 211 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 271 LKDADWYPLTIGLNQWKDQASTAG 294



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 123 RWLLNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 182

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 183 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 238

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 239 QISLPLLAPGIVTTALFTIVATWN 262


>gi|315227061|ref|ZP_07868848.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
 gi|315119511|gb|EFT82644.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
          Length = 682

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 76/507 (14%), Positives = 161/507 (31%), Gaps = 76/507 (14%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI--------------- 112
           + L +L A  +++      +  A   RRL  +L  ++D++ +IP                
Sbjct: 91  SALALLLAFFVAVGIALFISHYA--PRRLSSLLSYVVDLLAAIPSVVYGLWGALVLVPHI 148

Query: 113 ----------LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
                     LG++           P + I      +  +    + +M   ++Q    + 
Sbjct: 149 YPVWKTINRLLGWIPLFGP--QVSNPPRSIATVAVVLAVMILPIITSMARDIFQQAPVLQ 206

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +   E + +   + W+      +PF   GLV   M+ +       +A  MI+       +
Sbjct: 207 Q---EAALALGATKWETIKLAVLPFGKSGLVSASMLGLGRALGETMAVLMILSPGRTYGI 263

Query: 223 PGIGSYIALAIKEQDLLA-----------ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                 I  A   Q + A           +  + L   G++      L   +   +    
Sbjct: 264 D-----ILRASSHQTIAANIAAQFPEADNVGVSTLIATGLVLFIITFLVNFLARRATAKT 318

Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331
           +   +              K       G +        +  +  + +           + 
Sbjct: 319 IGAGSSPAKGKGKGGKASEKGQGAEIAGKADKTGADQAAAPISSVPKPDFDKFTPTRSSL 378

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--------GYIVNHFTYQDVLYVIWLG 383
                  R+  +L    F +     + + W ++         Y + H     V  +   G
Sbjct: 379 AGRKRFDRLMTVLIYTAFIIALIPLVSVLWTTVSQGAGRFNWYFLTHNMRGVVGGLYPYG 438

Query: 384 CITMFRVVVL--IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV-- 432
            I    V  L   + A +I +P+G+             H++  I  F  +++  P+ V  
Sbjct: 439 GILHAMVGTLEITLAAMVISLPIGVMTSVYLVEYSHGGHLARAISFFVDVMSGIPSIVAG 498

Query: 433 -----FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                FF +++   +   L   + LS+LMI      ++ +        P D +E + +  
Sbjct: 499 LFAYSFFSILLGPGTVNGLVGAVALSILMIPT----VVRSTQEMLQIVPTDLREASYALG 554

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC 514
           +T  R    ++L    P  ++GAI A 
Sbjct: 555 VTRSRTIVRVVLRTALPGIISGAILAI 581



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 4/146 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTF---VYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
             +      T    L+AMVISL       VY    +    L   +   +D+M  IP +  
Sbjct: 438 GGILHAMVGTLEITLAAMVISLPIGVMTSVYLVEYSHGGHLARAISFFVDVMSGIPSIVA 497

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             F   +F  L     +   + A+ A+    +  +  S  + L  +P DL E S +  ++
Sbjct: 498 GLFAYSFFSILLGPGTVNGLVGAV-ALSILMIPTVVRSTQEMLQIVPTDLREASYALGVT 556

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +    + +  ++PG++   +++++
Sbjct: 557 RSRTIVRVVLRTALPGIISGAILAIA 582


>gi|313112617|ref|ZP_07798275.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310625040|gb|EFQ08337.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 272

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 101/257 (39%), Gaps = 22/257 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++    F  +    V+ +I ++ +   +      + ++  I+          +R+ L  
Sbjct: 7   KKLAYPYFVWMTLFTVVPLIIVVYYAFTDANGAFTLDNLTSIS----GYGSVFARSLLLA 62

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILD--IMQSIPILGFLTF-----T 119
           L A VI L+  F      ++ R       L +V++P+    ++++   +G L+       
Sbjct: 63  LIATVICLVIAFPVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSINGPVNA 122

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+    L P  ++    A +  +  + V  M   +Y S+  I + L E ++    S  + 
Sbjct: 123 VLGVFGLGPFNMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGASTTKT 182

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDL 238
              + +P S+PG+   + M         V S M+  G  ++    IG  I    +     
Sbjct: 183 LLRVLIPMSVPGISTGITMVFVPAVSTFVISRMLGGGSNLL----IGDLIEMQFLGNSYN 238

Query: 239 LAILYAMLTMLGVIFLY 255
           L +  AM  +L +I L 
Sbjct: 239 LNVGSAMSLVLMIIVLL 255



 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 84/254 (33%), Gaps = 21/254 (8%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---TMFRVVVL 393
           +++++Y   ++         I + + +       FT  ++  +   G +   ++   ++ 
Sbjct: 6   DKKLAYPYFVWMTLFTVVPLIIVVYYAFTDANGAFTLDNLTSISGYGSVFARSLLLALIA 65

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-----FPANVFFPLVVS------CVS 442
            +I  +I  PVG ++         I     +L            +  L+         + 
Sbjct: 66  TVICLVIAFPVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSINGPVNAVLG 125

Query: 443 YYHLNP------NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            + L P      +  + L M++    Y++  +    +       E A     +  +    
Sbjct: 126 VFGLGPFNMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSLVEAAQDLGASTTKTLLR 185

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGSFPEV 555
           +++P   P   TG       A +  ++S +   G   L    +   ++  S        +
Sbjct: 186 VLIPMSVPGISTGITMVFVPAVSTFVISRMLGGGSNLLIGDLIEMQFLGNSYNLNVGSAM 245

Query: 556 VLGVLIMCCFVLAL 569
            L ++I+    ++ 
Sbjct: 246 SLVLMIIVLLCMSF 259


>gi|240014687|ref|ZP_04721600.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI18]
 gi|240017133|ref|ZP_04723673.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           FA6140]
 gi|240081229|ref|ZP_04725772.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           FA19]
 gi|240121208|ref|ZP_04734170.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           PID24-1]
 gi|268597339|ref|ZP_06131506.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268551127|gb|EEZ46146.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
          Length = 229

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 GYVISSVGVAVAMGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +  R +  + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    
Sbjct: 75  SLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGN 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P 
Sbjct: 135 P--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               ++ ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 187 LTGYVISSVGVAVAMGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|228989845|ref|ZP_04149825.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           pseudomycoides DSM 12442]
 gi|228996036|ref|ZP_04155691.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           Rock3-17]
 gi|229003652|ref|ZP_04161467.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           Rock1-4]
 gi|228757618|gb|EEM06848.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           Rock1-4]
 gi|228763732|gb|EEM12624.1| Phosphate ABC transporter, permease protein PstC [Bacillus mycoides
           Rock3-17]
 gi|228769992|gb|EEM18575.1| Phosphate ABC transporter, permease protein PstC [Bacillus
           pseudomycoides DSM 12442]
          Length = 297

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + L  L A+VIS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  SMLVSLGAVVISAPIALALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAISR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  V++++    +++  VV+   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  SFGAVIFIVGSMLVSLGAVVISAPIALALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIIVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 189 GLGSTKWQAISRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|224477416|ref|YP_002635022.1| putative glycine betaine/carnitine/choline transport system
           permease [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222422023|emb|CAL28837.1| putative glycine betaine/carnitine/choline transport system
           permease protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 227

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 78/209 (37%), Gaps = 15/209 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L     +  L  +  +V + +         ++  R+  +++ I +I+Q++P++ 
Sbjct: 14  SLNAGYLWSLFFQHLLMSVYGVVFAAIIGIPIGIFISRFGRMSKLVITIANIIQTVPVIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLVMGLG--------PTTVVVTVFLYALLPIIQNTYSGIVGVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P ++  ++  + +++            +V   + I  P +G  I     
Sbjct: 126 TRNQVLRMIELPLALSVIIGGLRIALVVA-------VGVVAVGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             D    + A    + +I +   +L R +
Sbjct: 179 ATDGTTFILAGALPIALIAVLIDVLLRLL 207



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 12/162 (7%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +S  +   A ++   P      +++  +          + + +       I+ N  +G 
Sbjct: 54  RMSKLVITIANIIQTVPVIAMLAILMLVMGLGPTT----VVVTVFLYALLPIIQNTYSGI 109

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                + K+      +T  +  R I LP      + G   A        +V+        
Sbjct: 110 VGVDENIKDAGKGMGMTRNQVLRMIELPLALSVIIGGLRIA-------LVVAVGVVAVGS 162

Query: 533 HLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVLALNRFL 573
            +    LG  I   T        ++ G L +    + ++  L
Sbjct: 163 FIGAPTLGDIIIRGTNATDGTTFILAGALPIALIAVLIDVLL 204


>gi|218134887|ref|ZP_03463691.1| hypothetical protein BACPEC_02790 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990272|gb|EEC56283.1| hypothetical protein BACPEC_02790 [Bacteroides pectinophilus ATCC
           43243]
          Length = 313

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 62/158 (39%), Gaps = 7/158 (4%)

Query: 74  SAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
             ++I+  F    A        +       P++ I   IP + +    LT  V     ++
Sbjct: 87  LGLLIATPFAIGSAIFMTEISPKFGEKFYRPVIQIFAGIPSVVYGWVGLTVLVPAIKTIF 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +       +T     ++  IP++    +     + WQ  + + +P 
Sbjct: 147 NRQVGHSILAAGLVLAIMIFPTITSVSADAIRAIPKEFRLGAYGMGSTRWQTTYKIVLPA 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           + PG+   +++ ++  +   +A  M+ +G T     GI
Sbjct: 207 AAPGIFSAVILGLARAFGEALAVAMV-IGQTTALPTGI 243



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 19/196 (9%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII----IASIIWIP--VGIWIGFR---- 411
            SIG  +    +  V  +   G +     +V  +    +  +I  P  +G  I       
Sbjct: 49  HSIGEFLFSADWAPVDNITGGGSVGTRIFIVGSLCTCGLGLLIATPFAIGSAIFMTEISP 108

Query: 412 PHISSKIQPFAQLLAAFPANV--FFPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWYI 464
                  +P  Q+ A  P+ V  +  L V       +    +  ++  + L++    +  
Sbjct: 109 KFGEKFYRPVIQIFAGIPSVVYGWVGLTVLVPAIKTIFNRQVGHSILAAGLVLAIMIFPT 168

Query: 465 LFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           + +V      A P +F+  A     T W+    I+LP   P   +  I     A+  ++ 
Sbjct: 169 ITSVSADAIRAIPKEFRLGAYGMGSTRWQTTYKIVLPAAAPGIFSAVILGLARAFGEALA 228

Query: 524 SEVASWGHIHLRTTGL 539
             +   G      TG+
Sbjct: 229 VAMV-IGQTTALPTGI 243


>gi|298246847|ref|ZP_06970652.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297549506|gb|EFH83372.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 205

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L +  + Q   +         +   L  F+ AT   +  R   V + + +++Q+IP +
Sbjct: 1   MDLSLPYMAQLTFQHLYLSFLGTLAGGLVGFLLATWVRRRPRCASVFIGLAEVIQTIPGI 60

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L F ++ F       ++G  L +I  +          + Y+ L  +     ++ +   
Sbjct: 61  ALLAFLLLAFGLGDTTLIVGLALYSILPVLQ--------NTYEGLVGVDPVYLDIGKGMG 112

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           ++  + F  + +P + P ++  + ++       +V +  I      I   G+G  I   +
Sbjct: 113 MTPGEIFRQIELPLAFPVILAGLRVA-------LVTAIGIATIGVFIGSGGLGVVIYRGL 165

Query: 234 KEQDLLAILYAMLTMLGVIFLY 255
           +  D+ AI+   +    +  L 
Sbjct: 166 QTIDMPAIVTGAIPAALLAVLL 187



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 14/212 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           + Y+  L    ++   +  +   ++   +  W+  RP  +S     A+++   P      
Sbjct: 5   LPYMAQLTFQHLYLSFLGTLAGGLVGFLLATWVRRRPRCASVFIGLAEVIQTIPGIALLA 64

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            ++           + L+L  I      +L N   G       + ++     +T    +R
Sbjct: 65  FLLLAFGLGDTTLIVGLALYSIL----PVLQNTYEGLVGVDPVYLDIGKGMGMTPGEIFR 120

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I LP  FP  + G   A   A   + +      G       GLG  I    +    P +
Sbjct: 121 QIELPLAFPVILAGLRVALVTAIGIATIGVFIGSG-------GLGVVIYRGLQTIDMPAI 173

Query: 556 VLGVLIMCCFVLALNR---FLWHPLYLYGTRC 584
           V G +      + L      +   L    ++ 
Sbjct: 174 VTGAIPAALLAVLLEVGLSLVERRLSKTTSQR 205


>gi|259508142|ref|ZP_05751042.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
 gi|259164231|gb|EEW48785.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
          Length = 232

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 85/216 (39%), Gaps = 16/216 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               L A+++SL         A + R  G +L P++ ++ +IP L       V F     
Sbjct: 19  LWLTLPAVLLSLAIAIPLGWTAHRWRIGGALL-PLVGVLYAIPSLPLFVLVPVLFGTGLR 77

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V    +  ++ +       +T ++     ++P  + + + +   S  ++FW +  P +
Sbjct: 78  SPVTMVAVLTLYGVAI-----LTRTVADGFSSVPLHVRKAATAVGYSSARRFWSVEFPLA 132

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +          VV++  +V   +V+ +  +G+      +   +  ++  ++  
Sbjct: 133 LPVIIAGLR-------VVVVSTVSLVTVGSVVGIQSLGTLFTDGFQRGIIAEVVTGVVLT 185

Query: 249 LGVIFLYD---QLLFRPMIVWSNKFRLERTTGIYPA 281
           + +  + D    L  R ++ WS   +  +     P 
Sbjct: 186 IALALILDACCVLAQRLLLPWSTTRKTTQKAARAPR 221



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 9/197 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  +V+ L  I ++  +  ++++  I IP+G W   R  I   + P   +L A P+   
Sbjct: 6   QNYPWVLELTWIHLWLTLPAVLLSLAIAIPLG-WTAHRWRIGGALLPLVGVLYAIPSLPL 64

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           F LV         +P   +++L ++G        V  G S+ P   ++ A++   +  R 
Sbjct: 65  FVLVPVLFGTGLRSPVTMVAVLTLYGVAILTR-TVADGFSSVPLHVRKAATAVGYSSARR 123

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +  P   P  + G         +   V  V            LG    +  ++G   
Sbjct: 124 FWSVEFPLALPVIIAGLRVVVVSTVSLVTVGSVVGIQS-------LGTLFTDGFQRGIIA 176

Query: 554 EVVLGVLIMCCFVLALN 570
           EVV GV++     L L+
Sbjct: 177 EVVTGVVLTIALALILD 193


>gi|300789773|ref|YP_003770064.1| glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299799287|gb|ADJ49662.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 227

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 8/143 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +PQ           ++VI+L+           + R G+ LV   + ++++P LG +T
Sbjct: 18  PDGIPQRLLEHLGYTALSLVIALVIAVPLGLFVGHTGRGGVALVSAGNAIRALPTLGLVT 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F  + F       +IG        +    V  +    Y  L      + + +    ++GW
Sbjct: 78  FLFLLFTESVTSTIIG--------LVVLAVPPILAGTYAGLQATDHGVVDAAEGVGMTGW 129

Query: 178 QKFWYLGVPFSMPGLVWNMMMSM 200
           Q+ W + VP S+P ++  +  ++
Sbjct: 130 QRLWQVEVPISLPLVLGGIRNAV 152



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + ++IA +I +P+G+++G        +      + A P       +    +    +  +
Sbjct: 33  ALSLVIALVIAVPLGLFVGHTGRGGVALVSAGNAIRALPTLGLVTFLFLLFTESVTSTII 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +L        IL    AG  A  +   + A    +TGW+    + +P   P  + G 
Sbjct: 93  GLVVL----AVPPILAGTYAGLQATDHGVVDAAEGVGMTGWQRLWQVEVPISLPLVLGGI 148

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   NA +     +    ++   GLG ++ +      + EV+ G L+     + L+
Sbjct: 149 R-------NAVLQLVATAAVAAYVGLGGLGRFLLDGLAILDYSEVIAGALLTTLLAIVLD 201

Query: 571 RFL 573
              
Sbjct: 202 LLF 204


>gi|291008764|ref|ZP_06566737.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 237

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                   + R  + +V   + M+++P LG +T  V+ F       + G  + A+ AI +
Sbjct: 58  PLGVYIGHTGRGAVFVVGASNAMRALPTLGVVTLLVLSFGLGEAPALAGLVILAVPAIVS 117

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                     Y  + N P D  + +R   ++ WQ+ W + +P ++P L   +  +M
Sbjct: 118 --------GTYAGITNAPPDAVDAARGMGMTSWQRLWQVELPNALPLLFGGVRSAM 165



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
               G+  + + ++ +   +     ++    + ++  VV + +A+++ +P+G++IG    
Sbjct: 9   ASGAGMIGELVAWLTDPANWTGQGGILVQTLLHLYYCVVSVAVAALVGVPLGVYIGHTGR 68

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
            +  +   +  + A P      L+V             L +L +      I+    AG +
Sbjct: 69  GAVFVVGASNAMRALPTLGVVTLLVLSFGLGEAPALAGLVILAVPA----IVSGTYAGIT 124

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             P D  + A    +T W+    + LP   P    G  +A 
Sbjct: 125 NAPPDAVDAARGMGMTSWQRLWQVELPNALPLLFGGVRSAM 165


>gi|227432423|ref|ZP_03914412.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351826|gb|EEJ42063.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 313

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 88/214 (41%), Gaps = 19/214 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           + L    A V++  F    +        +R   ++ PI++++  IP +  GF+  TVV  
Sbjct: 96  SFLVTFLAAVVATPFAIGTSLFMTEIAQKRGAKIMQPIIELLVGIPSVVYGFIGLTVVVP 155

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+    G      L+    +F   +  +T     +L ++PR   E + +   + WQ  + 
Sbjct: 156 FIRNITGGAGFGILSGTIVLFVMILPTITSMTVDTLKSVPRYYRESALAIGATRWQMIYK 215

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +  + PG++  ++  M+  +   +A +M++                 T +   GIG+ 
Sbjct: 216 VVLRSATPGIMTAIVFGMARAFGEALAVQMVIGNAALMPAGLTTPASTLTSVLTMGIGNT 275

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           +  +++   L  +   +L M  V  L  + + R 
Sbjct: 276 VMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGRR 309



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 69/216 (31%), Gaps = 33/216 (15%)

Query: 391 VVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVF--------F 434
            ++  +A+++  P    IG             +  +QP  +LL   P+ V+         
Sbjct: 97  FLVTFLAAVVATP--FAIGTSLFMTEIAQKRGAKIMQPIIELLVGIPSVVYGFIGLTVVV 154

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P + +              +L +      I    +    + P  ++E A +   T W+  
Sbjct: 155 PFIRNITGGAGFGILSGTIVLFVMI-LPTITSMTVDTLKSVPRYYRESALAIGATRWQMI 213

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLG 540
             ++L    P  +T  +     A+  ++  ++                     + T G+G
Sbjct: 214 YKVVLRSATPGIMTAIVFGMARAFGEALAVQMVIGNAALMPAGLTTPASTLTSVLTMGIG 273

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  S +      + + +L+M      + R +   
Sbjct: 274 NTVMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGRR 309


>gi|217960354|ref|YP_002338914.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus AH187]
 gi|217066349|gb|ACJ80599.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus AH187]
          Length = 135

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 6/120 (5%)

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LL+  G  + +  N   G     +   +VA     +  +    +ILP   P  + GA  +
Sbjct: 2   LLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLS 61

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G AW + +V+E+         T G+G  I ++ +  +   V +G++I        +  +
Sbjct: 62  LGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 115



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 9/138 (6%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +  I     + +  + +  +  +   L +V+R    S  +    L +P ++P L+    +
Sbjct: 1   MLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARL 60

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD-- 256
           S+   W  +V +E++          GIG  I  A +  +   +   ++    V    D  
Sbjct: 61  SLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSL 114

Query: 257 -QLLFRPMIVWSNKFRLE 273
            +LL    + W + F+ E
Sbjct: 115 VRLLEVKFLRWRDNFKGE 132


>gi|149195680|ref|ZP_01872737.1| Phosphate transport system permease protein 2 [Lentisphaera
           araneosa HTCC2155]
 gi|149141142|gb|EDM29538.1| Phosphate transport system permease protein 2 [Lentisphaera
           araneosa HTCC2155]
          Length = 551

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 59/157 (37%), Gaps = 21/157 (13%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T +  +   +    F  + A      AK   +   +   ++ +  +P + F  F + +F+
Sbjct: 303 TLVMTIVMCIPVTFFGVITAIYLHEYAKDSLVTRAVRIAINNLAGVPSIVFGAFGLGFFI 362

Query: 125 NLYPGKV------------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                 +                   G  L A   +    +  +  S  ++L ++P  L 
Sbjct: 363 YFIGSNIDDFFFKDWKLATGEPIFGTGGLLWASLTLALMTLPVVIVSTEEALSSVPHGLR 422

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           E +     + WQ  W + +P + PG++  M+++M+ G
Sbjct: 423 EGAMGCGATKWQSIWTVILPSATPGIITGMILAMARG 459



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%)

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            +     LW SL +   T   ++ +     S+ P+  +E A     T W+    +ILP  
Sbjct: 385 IFGTGGLLWASLTLALMTLPVVIVSTEEALSSVPHGLREGAMGCGATKWQSIWTVILPSA 444

Query: 503 FPYYVTGAITAC 514
            P  +TG I A 
Sbjct: 445 TPGIITGMILAM 456


>gi|257884829|ref|ZP_05664482.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257820667|gb|EEV47815.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 247

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + I W+   +I+            D   ++     T+   V+ ++IAS++  
Sbjct: 13  FILIIWQIVVIVWKIPAFILPEPAAVFSALASDAQVLLSHSVTTLNEAVLGLVIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +++  I    +P        +  D   L  ++  T    +  +VI+ + 
Sbjct: 11  MAFILIIWQIVVIVWKIPAFILPEPAAVFSALASDAQVLLSHSVTTLNEAVLGLVIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                      VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ---ATYCVSGAVVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|327456979|gb|EGF03634.1| ABC transporter, permease protein [Propionibacterium acnes
           HL092PA1]
          Length = 238

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 79/211 (37%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + IA+I  IP G+ IG      +      
Sbjct: 14  ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKTIAVACF 73

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 74  GALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAIDDEVADG 133

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 134 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 186

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 187 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 68/224 (30%), Gaps = 17/224 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ I+ +           + R   
Sbjct: 8   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT 67

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMY 155
           + V     +++         ++     L     IG E   +     +    +  +    Y
Sbjct: 68  IAVACFGALRA-------LPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSY 120

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +
Sbjct: 121 SGVDAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGM 180

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G       G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 181 G-------GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217


>gi|315651830|ref|ZP_07904834.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
 gi|315485960|gb|EFU76338.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
          Length = 249

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 19/258 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           I+P  F ++   +   +  + +  +     P  IV  +        L  +   T    L 
Sbjct: 8   IYPVAFGIIFLAVWQILCTLKVIPVFLMPSPIQIVKALTEDF--LLLMYHLVITLAESLI 65

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +V+ +   F++A L  +   +     P + I Q+IP +      V++F           
Sbjct: 66  GLVVGVFLGFIFALLMDRFINVYKTFYPFVIITQTIPTIAIAPLLVLWFGYDL------- 118

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L  +  I     + +T  + +S  +   D   + +S   S +  + ++ +P SM     
Sbjct: 119 -LPKVILIVLVTFFPITIGLLESFKSADSDEINLLKSMGASEFDIYKFIKIPSSMGKFFA 177

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL---AIKEQDLLAILYAMLTMLGV 251
            + +S S      V +E +          G+G Y+     A     + A++  +  +  +
Sbjct: 178 ALKISASYSVVGGVIAEWLGG------FRGLGVYMTRVRKAYAFDKMFAVIIIISILSLL 231

Query: 252 IFLYDQLLFRPMIVWSNK 269
           +     LL +  + W  K
Sbjct: 232 LLKVVDLLQKIAMPWEEK 249



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 74/217 (34%), Gaps = 10/217 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
             +    W  +     I +        +     +D L +++   IT+   ++ +++   +
Sbjct: 14  GIIFLAVWQILCTLKVIPVFLMPSPIQIVKALTEDFLLLMYHLVITLAESLIGLVVGVFL 73

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
                + +    ++     PF  +    P     PL+V    Y      L   +L++  T
Sbjct: 74  GFIFALLMDRFINVYKTFYPFVIITQTIPTIAIAPLLVLWFGY----DLLPKVILIVLVT 129

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
            + I   ++    +  +D   +  S   + +  +++I +P     +      +   +   
Sbjct: 130 FFPITIGLLESFKSADSDEINLLKSMGASEFDIYKFIKIPSSMGKFFAALKISASYSVVG 189

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +++E            GLG Y+    +  +F ++  
Sbjct: 190 GVIAEWLGG------FRGLGVYMTRVRKAYAFDKMFA 220


>gi|303327854|ref|ZP_07358294.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp.
           3_1_syn3]
 gi|302862215|gb|EFL85149.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp.
           3_1_syn3]
          Length = 296

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 14/211 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F  + G+ +   +    ++     Y      ++     +   + + + +S++ +
Sbjct: 26  LAGIVLFLFMEGLPLFAHYSVFDFLFGRLWYPTEDPGLFGIFPLLMASLAVTLFSSLLAV 85

Query: 403 PVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNP 448
           P+G+           P +   I+PF +LLAA P+ V          P++   +       
Sbjct: 86  PLGVLTAVYLTEIAHPGVRRIIKPFVELLAALPSVVLGFLGMVVLAPVIQDWLGAATGLN 145

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L  SL++   +   I         + P D +E + +   T W+    + +P       T
Sbjct: 146 LLNASLVLALMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVAIPAALSGIGT 205

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             +     A   ++V  + + G   + T+ L
Sbjct: 206 AVMLGMSRAIGETMVVLMVAGGAGLIPTSLL 236



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 20/206 (9%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTV 120
            +  L+  + S L       L A          +  ++ P ++++ ++P  +LGFL   V
Sbjct: 70  LMASLAVTLFSSLLAVPLGVLTAVYLTEIAHPGVRRIIKPFVELLAALPSVVLGFLGMVV 129

Query: 121 VY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQ 178
           +   +  + G   G  L     +          S+   +L ++PRDL E S +   + WQ
Sbjct: 130 LAPVIQDWLGAATGLNLLNASLVLALMSVPTICSVSEDALYSVPRDLREASLALGATRWQ 189

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSY 228
               + +P ++ G+   +M+ MS      +   M+  G  +IP             I + 
Sbjct: 190 TTVRVAIPAALSGIGTAVMLGMSRAIGETMVVLMVAGGAGLIPTSLLDPVRPMPASIAAE 249

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFL 254
           +A A    D    L+A+  +L  + L
Sbjct: 250 MAEAPFRSDHYHALFAIGIVLFFLTL 275


>gi|161520061|ref|YP_001583488.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189353758|ref|YP_001949385.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344111|gb|ABX17196.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans ATCC 17616]
 gi|189337780|dbj|BAG46849.1| osmoprotectant transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 392

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 63/145 (43%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + ASR       ++  +L+         A++  +  +++P+L+I+Q+IP +      + 
Sbjct: 182 WREASRHLSLAGGSVAAALVAGLPLGIACARAAPVRAIVMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+ + + +  ++P ++  + +
Sbjct: 302 MTRAQRLFRVDLVLALPVILSGVRV 326



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  A +  +P+GI       + + + P   ++   P+   + L+++ +     +  L  +
Sbjct: 196 VAAALVAGLPLGIACARAAPVRAIVMPVLNIVQTIPSIAMYGLMMAPLGLLAAHVPLAAA 255

Query: 454 L------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L             +   +   I  +V  G +  P    E A +  +T  +    + L  
Sbjct: 256 LGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMGMTRAQRLFRVDLVL 315

Query: 502 IFPYYVTGAITAC 514
             P  ++G     
Sbjct: 316 ALPVILSGVRVVL 328


>gi|239999510|ref|ZP_04719434.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           35/02]
 gi|240126337|ref|ZP_04739223.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128707|ref|ZP_04741368.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268595321|ref|ZP_06129488.1| ABC transporter, permease [Neisseria gonorrhoeae 35/02]
 gi|268684922|ref|ZP_06151784.1| ABC transporter [Neisseria gonorrhoeae SK-92-679]
 gi|268687094|ref|ZP_06153956.1| ABC transporter [Neisseria gonorrhoeae SK-93-1035]
 gi|268548710|gb|EEZ44128.1| ABC transporter, permease [Neisseria gonorrhoeae 35/02]
 gi|268625206|gb|EEZ57606.1| ABC transporter [Neisseria gonorrhoeae SK-92-679]
 gi|268627378|gb|EEZ59778.1| ABC transporter [Neisseria gonorrhoeae SK-93-1035]
 gi|317164758|gb|ADV08299.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 229

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 GYVISSVGVAVAMGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 86/222 (38%), Gaps = 19/222 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGISVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 193 SSVGVAVAMGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|258423651|ref|ZP_05686539.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9635]
 gi|257846149|gb|EEV70175.1| phosphate ABC transporter, permease PstA [Staphylococcus aureus
           A9635]
          Length = 305

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   MLS + +S++     A      AK+ +    +   +  +  +P + F       F+
Sbjct: 86  SLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFV 145

Query: 125 NLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                + +      LAA   +    +  +  S  +++  +P  + E S     + WQ   
Sbjct: 146 GGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASFGLGANKWQTIR 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P ++PG++   ++S+S  
Sbjct: 206 RVVLPAALPGILTGFILSLSRA 227



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +    +   +  G++  ++ +  N   +   +  V      +++ ++ +I ++ I+ 
Sbjct: 42  GLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILG 101

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLW 451
           I   I++         +  ++     LA  P+ VF  L  +              N  L 
Sbjct: 102 IGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILA 161

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L M       I+ +      A PN  +E +       W+  R ++LP   P  +TG I
Sbjct: 162 AALTMTLLILPIIIVSSQEAIRAVPNSVREASFGLGANKWQTIRRVVLPAALPGILTGFI 221

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            +   A   +    +     I L T 
Sbjct: 222 LSLSRALGETAPLVLIGIPTILLATP 247


>gi|229171499|ref|ZP_04299083.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           MM3]
 gi|228612037|gb|EEK69275.1| Phosphate ABC transporter, permease protein PstC [Bacillus cereus
           MM3]
          Length = 297

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T+  L A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 81  STVVSLGAVIISAPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILVP 140

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++ ++P D  E S     + WQ    
Sbjct: 141 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASYGLGSTKWQAVSR 200

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 201 VIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTATLTGILTMDMTNT 260

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L VI     L+ R +     +
Sbjct: 261 LNGTAWNNALWTLAMILLVISFLFILVIRAIGQRGER 297



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T+  +++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 71  TFGALIFIVGSTVVSLGAVIISAPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 128

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      + P D+ E + 
Sbjct: 129 VYGLLGVTILVPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRSVPFDYLEASY 188

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     I            
Sbjct: 189 GLGSTKWQAVSRVIVPAAKKGILTGVVLGLARAFGEALAVQMVIGNTIKLPEGIYSPTAT 248

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M   V++ 
Sbjct: 249 LTGILTMDMTNTLNGTAWNNALWTLAMILLVISF 282


>gi|34499850|ref|NP_904065.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34105700|gb|AAQ62054.1| probable ABC transporter system, amino acid permease
           [Chromobacterium violaceum ATCC 12472]
          Length = 243

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 21/208 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP 111
              L        L  L+ + +S     +    AA        R    +L  +L I QS P
Sbjct: 38  PLYLQDGFGELLLAHLAIVALSGGAAALLGISAALWTSRPAGRDFRPLLETLLSIAQSFP 97

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            +  L  TV          +I   L ++  I  + +          L ++P D  E +R 
Sbjct: 98  PVAVLALTVPLIGFGAAPALIALALYSLLPITHAAL--------AGLASVPEDALETARG 149

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
             +S  Q  W + +P + P +V  +  +M        A+    VG   + LP     I +
Sbjct: 150 MGMSPRQMLWRVELPLAAPVIVAGLRTAMVI--NIGTAALASTVGARTLGLP-----IIV 202

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +   +   ++   L +  +  + DQ  
Sbjct: 203 GLSGFNTAYVIQGALPVALLAIVVDQAF 230



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 7/183 (3%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           L    +  V +    A+++ I   +W            ++    +  +FP      L V 
Sbjct: 48  LLLAHLAIVALSGGAAALLGISAALWTSRPAGRDFRPLLETLLSIAQSFPPVAVLALTVP 107

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + +      + L+L  +      I    +AG ++ P D  E A    ++  +    + L
Sbjct: 108 LIGFGAAPALIALALYSLL----PITHAALAGLASVPEDALETARGMGMSPRQMLWRVEL 163

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVVLG 558
           P   P  V G  TA       + ++       + L    GL  +      +G+ P  +L 
Sbjct: 164 PLAAPVIVAGLRTAMVINIGTAALASTVGARTLGLPIIVGLSGFNTAYVIQGALPVALLA 223

Query: 559 VLI 561
           +++
Sbjct: 224 IVV 226


>gi|325958236|ref|YP_004289702.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanobacterium sp. AL-21]
 gi|325329668|gb|ADZ08730.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanobacterium sp. AL-21]
          Length = 291

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 94  RRLGMVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             +  +L P +  +  IP +  GF    V+  FM ++ G    + LAA   +    +  +
Sbjct: 98  PTMRKILKPTIQGLAGIPSVIYGFFGLVVLVPFMRVHYGGTGFSLLAASLILTIMILPTI 157

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     +L +IP + +E S +   + WQ    + +P ++PG++  +++ M       +A 
Sbjct: 158 TSISEDALRSIPMEYKEASFALGATQWQTIKNVLLPAAVPGVITAIILGMGRAIGETMA- 216

Query: 211 EMIVVGDTVIPLPG 224
            +I+V   V+ +PG
Sbjct: 217 -VIMVAGNVVQIPG 229



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 7/133 (5%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--FPLVVSC----VSYYHLNPNLWLSLLMIFGTQWYIL 465
           P +   ++P  Q LA  P+ ++  F LVV      V Y     +L  + L++       +
Sbjct: 98  PTMRKILKPTIQGLAGIPSVIYGFFGLVVLVPFMRVHYGGTGFSLLAASLILTIMILPTI 157

Query: 466 FNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            ++      + P ++KE + +   T W+  + ++LP   P  +T  I   G A   ++  
Sbjct: 158 TSISEDALRSIPMEYKEASFALGATQWQTIKNVLLPAAVPGVITAIILGMGRAIGETMAV 217

Query: 525 EVASWGHIHLRTT 537
            + +   + +  +
Sbjct: 218 IMVAGNVVQIPGS 230


>gi|260430050|ref|ZP_05784025.1| ABC transporter permease protein [Citreicella sp. SE45]
 gi|260418973|gb|EEX12228.1| ABC transporter permease protein [Citreicella sp. SE45]
          Length = 275

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 95/260 (36%), Gaps = 18/260 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++ R +P +  L++ +            I+   +P     +     DV  L + A  T  
Sbjct: 24  VAERSWPAVLILVSLIAGWEW-ACAALDIKPYILPAPSAILAAALNDVPGLARNAGITAW 82

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              +  VI      +  T  A SR L    +P +    +IP++      +++F +    K
Sbjct: 83  EATAGFVIGSALGALLGTAFAYSRFLARGFLPFIIAANTIPVVAIAPIIIIWFGHGIGSK 142

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                   I        + +  +M + L +  R + +V      S  Q F+ + +P ++P
Sbjct: 143 --------IAVTAFLSFFPLALNMMKGLQSYDRTVADVFHIAAASPLQTFFKMRLPSALP 194

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML---T 247
            +   + ++++      + +E +          G+G  I    +   +  +  AML    
Sbjct: 195 YVFVGLKLNVTFSVIGAIVAEFV------QADRGLGFVIMTTYRTMAMPKLWAAMLLSAL 248

Query: 248 MLGVIFLYDQLLFRPMIVWS 267
           M  + FL   +L R  + W 
Sbjct: 249 MGILFFLVVAMLERIFVPWH 268



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 23/255 (9%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-------------Q 374
           P        + R+  + +  W  V+  V++   W+     ++   Y              
Sbjct: 9   PVARRTAPLSHRLLDVAERSWPAVLILVSLIAGWEWACAALDIKPYILPAPSAILAAALN 68

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           DV  +     IT +      +I S +   +G    +   ++    PF       P     
Sbjct: 69  DVPGLARNAGITAWEATAGFVIGSALGALLGTAFAYSRFLARGFLPFIIAANTIPVVAIA 128

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P+++    +   +     + L    + + +  N++ G  ++     +V      +  + +
Sbjct: 129 PIIIIWFGHGIGSKIAVTAFL----SFFPLALNMMKGLQSYDRTVADVFHIAAASPLQTF 184

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   PY   G       +   +IV+E            GLG  I  +    + P+
Sbjct: 185 FKMRLPSALPYVFVGLKLNVTFSVIGAIVAEFVQ------ADRGLGFVIMTTYRTMAMPK 238

Query: 555 VVLGVLIMCCFVLAL 569
           +   +L+     +  
Sbjct: 239 LWAAMLLSALMGILF 253


>gi|222084767|ref|YP_002543296.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221722215|gb|ACM25371.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 249

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 18/221 (8%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
             +     P       PI    +SLP  A      +L ++  S +   +      +    
Sbjct: 25  EWLIPILAPLTKFGASPIYTQ-NSLPSLALSHMELILISIAASGILAVLGGIFVTRKSGA 83

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               +   I +  Q+ P +  L   +               +  + A+F   +  +  + 
Sbjct: 84  DFLPLSRAIANAGQTFPPVAVLALAI--------STTGFGAVPTLIALFLYALLPIFENT 135

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  +P  + + +    ++GWQ+ + + +P ++P ++  + ++        V +    
Sbjct: 136 VAGLQQVPATVLDAADGMGMNGWQRLFRVELPLALPLIIEGLKIA-------TVINIGTA 188

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
              + +   G+G  I   +   +   IL   L +  +  L 
Sbjct: 189 TIGSTVAAKGLGEVIIAGLINDNTAFILQGGLIVGLMAVLI 229



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANVF 433
            +  L    M  +++ I  + I+ +  GI++       +   P ++ +A     FP    
Sbjct: 47  SLPSLALSHMELILISIAASGILAVLGGIFV--TRKSGADFLPLSRAIANAGQTFPPVAV 104

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L +S   +      +   + +       I  N +AG    P    + A    + GW+ 
Sbjct: 105 LALAISTTGFGA----VPTLIALFLYALLPIFENTVAGLQQVPATVLDAADGMGMNGWQR 160

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G   A       ++++   +     +   GLG  I       +  
Sbjct: 161 LFRVELPLALPLIIEGLKIA-------TVINIGTATIGSTVAAKGLGEVIIAGLINDNTA 213

Query: 554 EVVLGVLIMCCFVLAL 569
            ++ G LI+    + +
Sbjct: 214 FILQGGLIVGLMAVLI 229


>gi|239981980|ref|ZP_04704504.1| permease membrane component [Streptomyces albus J1074]
 gi|291453831|ref|ZP_06593221.1| permease membrane component [Streptomyces albus J1074]
 gi|291356780|gb|EFE83682.1| permease membrane component [Streptomyces albus J1074]
          Length = 287

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 10/195 (5%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P     R             +   + ++L G        D+  I    L   ++     +
Sbjct: 33  PEPDGPRKPARRVSWQKLTFLPVFLLLVLLGTWLWFRGADLDAISENALGGGNVWLRLRQ 92

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                + +    L+       L  + R  R   +   + +I Q+ P +G L   V++   
Sbjct: 93  HIQLTVISTFFVLIIAIPLGILLTRPRLRRAAPLATALANIGQATPAIGLLALMVIWLGI 152

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                +IG        I    V  +  +    L      L E +R   +S       + +
Sbjct: 153 GERPALIG--------IIIYAVLPVLSNTVAGLKANDPTLLEAARGIGMSPRGVLLKVEL 204

Query: 186 PFSMPGLVWNMMMSM 200
           P ++P ++  +  ++
Sbjct: 205 PLAVPLILAGVRTAL 219



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 17/184 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHL 446
           V+      II IP+GI +  RP +     P A  LA      PA     L+V  +     
Sbjct: 98  VISTFFVLIIAIPLGILL-TRPRLRRAA-PLATALANIGQATPAIGLLALMVIWLGIGER 155

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + + +  +      +L N +AG  A      E A    ++       + LP   P  
Sbjct: 156 PALIGIIIYAVL----PVLSNTVAGLKANDPTLLEAARGIGMSPRGVLLKVELPLAVPLI 211

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + ++     G +          I         P +VLG ++     
Sbjct: 212 LAGVRTALVLNVGTATLATFGGGGGLGD-------LITTGITNQRMPVLVLGSILTVALA 264

Query: 567 LALN 570
           L ++
Sbjct: 265 LLVD 268


>gi|312888612|ref|ZP_07748181.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311298926|gb|EFQ76026.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 296

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 97/274 (35%), Gaps = 26/274 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQET---TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            LL   ++ GI  +L+           P D +         +          +      +
Sbjct: 21  GLLVIAILGGIFFMLVWNTVAFFLKVKPLDFITGTQWNPSGNHASYGILPLLVSTCLVTL 80

Query: 78  ISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYP 128
            +++         A        +++  +L P+++++ ++P   +GFL   ++  F+    
Sbjct: 81  GAMVIAIPLGIFTAAFLSEYADKKVKNILKPMIEMLAAVPSVAIGFLGIVILGPFIAHLT 140

Query: 129 GKVIGAE-LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            +  G   L     +    +  +      +L  +PR  +E S     + WQ    + +P 
Sbjct: 141 SQSNGLNALNGAILLSVMALPTIITVTEDALQGVPRSYKEASYGVGANKWQTLIKVTIPA 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLL-- 239
           + PG++  +M+ +       +   M     +         +  I + IA+ + E      
Sbjct: 201 AAPGILAAIMLGVGRAIGETMTVLMATGNVSAFPKGFFHSVRTITATIAIEMGEVPYQTT 260

Query: 240 --AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
               L+A+ T+L +I L   L     +   NKFR
Sbjct: 261 HYYALFAIATVLFLITLLVNLAGEYFV---NKFR 291



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  IF+  V   VA  +  + + +I          +  +     +    ++ + A +
Sbjct: 25  IAILGGIFFMLVWNTVAFFLKVKPLDFITGTQWNPSGNHASYGILPLLVSTCLVTLGAMV 84

Query: 400 IWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYH 445
           I IP+GI+            + + ++P  ++LAA P+            P +    S  +
Sbjct: 85  IAIPLGIFTAAFLSEYADKKVKNILKPMIEMLAAVPSVAIGFLGIVILGPFIAHLTSQSN 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  ++L+       I+          P  +KE +       W+    + +P   P 
Sbjct: 145 GLNALNGAILLSVMALPTIITVTEDALQGVPRSYKEASYGVGANKWQTLIKVTIPAAAPG 204

Query: 506 YVTGAITACGGAWNASIVSEVASW 529
            +   +   G A   ++   +A+ 
Sbjct: 205 ILAAIMLGVGRAIGETMTVLMATG 228


>gi|255293243|dbj|BAH90332.1| ABC transporter, permease protein [uncultured bacterium]
          Length = 253

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 19/259 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           R   P +  +++  +   +    +        P  I       +           T    
Sbjct: 8   RIALPTLVAVVSIGIWQTLSATGVLNPVTFPSPLAIAGAFGKLVTRGYFWDATWITLSET 67

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L    I      V   L    R   M   P +   Q+ P +      + +F      KV+
Sbjct: 68  LLGFAIGATSGLVIGALTGTFRTFRMAFYPWVVAFQNTPRVALAPIFLTWFGFGITSKVV 127

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A +   F         +  +    +  +  + + + R+   +  Q F+ L +P +    
Sbjct: 128 MAAVICFF--------PVVINTVAGIAGVDENAKTLFRTLGATKTQTFFRLTLPGASAVA 179

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +++      +  E +   +      G+G  I   +  Q  +A+ +A++  L  I
Sbjct: 180 FAGIKTALTLALLGAIVGEFVGASE------GLGVLI-KELNFQLEVAMGFAVVLFLAAI 232

Query: 253 FL----YDQLLFRPMIVWS 267
            L      +L+ + +I W+
Sbjct: 233 GLALYGLIELIEKRLITWA 251



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 13/201 (6%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           IT+   ++   I +   + +G   G          P+       P     P+ ++   + 
Sbjct: 62  ITLSETLLGFAIGATSGLVIGALTGTFRTFRMAFYPWVVAFQNTPRVALAPIFLTWFGFG 121

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +  +++      + ++ N +AG +    + K +  +   T  + +  + LPG   
Sbjct: 122 ITSKVVMAAVI----CFFPVVINTVAGIAGVDENAKTLFRTLGATKTQTFFRLTLPGASA 177

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G  TA   A   +IV E          + GLG  I E   +         VL +  
Sbjct: 178 VAFAGIKTALTLALLGAIVGEFVG------ASEGLGVLIKELNFQLEVAMGFAVVLFLAA 231

Query: 565 FVLA---LNRFLWHPLYLYGT 582
             LA   L   +   L  +  
Sbjct: 232 IGLALYGLIELIEKRLITWAR 252


>gi|306842498|ref|ZP_07475149.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306287354|gb|EFM58834.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 403

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 64/178 (35%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV---YFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP +      +    +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNGLNIVQTIPSMALFGILIAPLNWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ ++++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNGLNIVQTIPSMALFGILIAPLNWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|255066721|ref|ZP_05318576.1| abcb protein [Neisseria sicca ATCC 29256]
 gi|255049049|gb|EET44513.1| abcb protein [Neisseria sicca ATCC 29256]
          Length = 265

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 79/194 (40%), Gaps = 10/194 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R V  I +A    +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVAGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNRQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            Y ++    A        I++E+         + G+GA IA++        V+  V+++ 
Sbjct: 189 GYVISSIGVAVAMGVKVVIMAELLG------ASEGVGARIADARAMLETSTVMAYVVLVI 242

Query: 564 CFVLALNRFLWHPL 577
            FV      +  PL
Sbjct: 243 VFVSLFEYLITKPL 256



 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGGFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           + + ++L        +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  AGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ R  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNRQHEELFDAYKLGRLKKIRYLYIPHLTGYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            ++ ++++ G   V+ +E++   +      G+G+ IA A    +   ++  ++ ++  + 
Sbjct: 193 SSIGVAVAMGVKVVIMAELLGASE------GVGARIADARAMLETSTVMAYVVLVIVFVS 246

Query: 254 LYDQLLFRPM 263
           L++ L+ +P+
Sbjct: 247 LFEYLITKPL 256


>gi|329571840|gb|EGG53518.1| phosphate ABC transporter, permease protein PstC [Enterococcus
           faecalis TX1467]
          Length = 288

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
                +S +    +A  AA        ++    L P+++++  IP + +    L+  V +
Sbjct: 74  FIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVYGFIGLSVIVPF 133

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++ G   G  LA  F +F   +  +T     +L  +PR   E S +   + WQ  + 
Sbjct: 134 VRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLALGATRWQTIYK 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 193 VVLRAAVPGILTAVVFGMARAFGEALAIQMVIGN 226



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 60/172 (34%), Gaps = 11/172 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +     +  I+A+   I   +++        +  +QP  +LL   P+ V+
Sbjct: 63  MVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQPVIELLVGIPSVVY 122

Query: 434 --------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
                    P V S          L  + ++       +    +    A P  ++E + +
Sbjct: 123 GFIGLSVIVPFVRSIFGGTGFG-ILAGTFVLFVMILPTVTTMTVDALKAVPRHYREASLA 181

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 182 LGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAAVMPTS 233


>gi|317128022|ref|YP_004094304.1| binding-protein-dependent transporters inner membrane component
           [Bacillus cellulosilyticus DSM 2522]
 gi|315472970|gb|ADU29573.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus cellulosilyticus DSM 2522]
          Length = 268

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 89/255 (34%), Gaps = 19/255 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +    ++N+    + ++ +P     I  +T    +L      T             
Sbjct: 22  IIWEICSWLLLNVFQVRLAQSKLPYIHKLIETLTSYWGTLFSEGWVTFANASIGFAAGAS 81

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              + A L + SR +  +  P     Q IPILG              G V   +LA I  
Sbjct: 82  AGILLAILMSSSRWIEQLTFPYAVASQMIPILGLAPIVY--------GIVRDVQLARILI 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                 + +  ++ + L +      E+  S+    W  +W L  P ++PGL   + ++  
Sbjct: 134 AGYITFFPVAMNVLRGLRSAEPTAMELMHSYAAKPWTVYWKLKFPAALPGLFSGLKIAAP 193

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ-DLLAILYAMLTMLGVIFLY----D 256
                 +  E++   +      G+G  +   +      + + +  + +  ++ +      
Sbjct: 194 LAVTGAILVELMGASN------GLGVIMLRNLYYGPSHIYMFWLTVILGALLGILSYFII 247

Query: 257 QLLFRPMIVWSNKFR 271
            ++ R +  W  +FR
Sbjct: 248 TIIERLVTPWQPEFR 262



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 13/253 (5%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN--HFTYQDVLYVIW 381
           R        ++     +  + +I  + ++    + +A   + YI             +  
Sbjct: 4   RGPLQRWAQKITWIFGILIIWEICSWLLLNVFQVRLAQSKLPYIHKLIETLTSYWGTLFS 63

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            G +T     +     +   I + I +     I     P+A      P     P+V   V
Sbjct: 64  EGWVTFANASIGFAAGASAGILLAILMSSSRWIEQLTFPYAVASQMIPILGLAPIVYGIV 123

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +  L   L+  + T + +  NV+ G  +      E+  S+    W  +  +  P 
Sbjct: 124 R----DVQLARILIAGYITFFPVAMNVLRGLRSAEPTAMELMHSYAAKPWTVYWKLKFPA 179

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   +G   A   A   +I+ E+         + GLG  +  +   G     +  + +
Sbjct: 180 ALPGLFSGLKIAAPLAVTGAILVELMG------ASNGLGVIMLRNLYYGPSHIYMFWLTV 233

Query: 562 M-CCFVLALNRFL 573
           +    +  L+ F+
Sbjct: 234 ILGALLGILSYFI 246


>gi|189023467|ref|YP_001934235.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237814685|ref|ZP_04593683.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|254696644|ref|ZP_05158472.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701022|ref|ZP_05162850.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 5 str. 513]
 gi|254707093|ref|ZP_05168921.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M163/99/10]
 gi|254709366|ref|ZP_05171177.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis B2/94]
 gi|254713213|ref|ZP_05175024.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M644/93/1]
 gi|254716433|ref|ZP_05178244.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M13/05/1]
 gi|254731552|ref|ZP_05190130.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 4 str. 292]
 gi|256030889|ref|ZP_05444503.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella pinnipedialis M292/94/1]
 gi|256046011|ref|ZP_05448883.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112724|ref|ZP_05453645.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis bv. 3 str. Ether]
 gi|256258776|ref|ZP_05464312.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 9 str. C68]
 gi|260563291|ref|ZP_05833777.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|261218219|ref|ZP_05932500.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261314566|ref|ZP_05953763.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|261320933|ref|ZP_05960130.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|265987948|ref|ZP_06100505.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265994165|ref|ZP_06106722.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|294851621|ref|ZP_06792294.1| osmoprotectant transport system permease [Brucella sp. NVSL
           07-0026]
 gi|189019039|gb|ACD71761.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|237789522|gb|EEP63732.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus str. 2308 A]
 gi|260153307|gb|EEW88399.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260923308|gb|EEX89876.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261293623|gb|EEX97119.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261303592|gb|EEY07089.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M163/99/10]
 gi|262765146|gb|EEZ11067.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|264660145|gb|EEZ30406.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|294820210|gb|EFG37209.1| osmoprotectant transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 403

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|313673534|ref|YP_004051645.1| phosphate abc transporter, inner membrane subunit psta
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940290|gb|ADR19482.1| phosphate ABC transporter, inner membrane subunit PstA
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 578

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 63/154 (40%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T +  +   +  + F  V A      AKS ++  +L   ++ +  +P + +  F + +F 
Sbjct: 333 TVVMTVLMSLFVVPFGVVAAIYMKEYAKSGKMISILRIAINNLAGVPSIVYGVFGLGFFA 392

Query: 125 NLYPGKVIGAELAAIFAIFT----SQVWN-----------MTFSMYQSLCNIPRDLEEVS 169
                 +     +A     T      +W+           +  +  +++  +P  L E S
Sbjct: 393 YTLGATIDQLFYSAKLPNPTFGTGGILWSSLTLALLTLPVVIVATEEAINAVPNSLREGS 452

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + WQ   Y+ +P +MPG++   +++MS G
Sbjct: 453 YACGATKWQTVRYIVLPRAMPGIMTGFILAMSRG 486



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 26/154 (16%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYY 444
           +F  VV+ ++ S+  +P G+         +K      +L  A       P +V       
Sbjct: 330 IFGTVVMTVLMSLFVVPFGVVAAIYMKEYAKSGKMISILRIAINNLAGVPSIVYGVFGLG 389

Query: 445 HLNPNLWLSLLMIF-------------GTQWY-----------ILFNVIAGASAFPNDFK 480
                L  ++  +F             G  W            ++       +A PN  +
Sbjct: 390 FFAYTLGATIDQLFYSAKLPNPTFGTGGILWSSLTLALLTLPVVIVATEEAINAVPNSLR 449

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           E + +   T W+  RYI+LP   P  +TG I A 
Sbjct: 450 EGSYACGATKWQTVRYIVLPRAMPGIMTGFILAM 483


>gi|227551220|ref|ZP_03981269.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecium TX1330]
 gi|257887662|ref|ZP_05667315.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257896157|ref|ZP_05675810.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293377158|ref|ZP_06623366.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179688|gb|EEI60660.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Enterococcus faecium TX1330]
 gi|257823716|gb|EEV50648.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257832722|gb|EEV59143.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|292644178|gb|EFF62280.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 247

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + + W+   +I+            D   ++     T+   V+ + IAS++  
Sbjct: 13  FILIIWQIVVLVWKIPAFILPGPAAVFSALTADAQVLLSHSVTTLNEAVIGLAIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +L+  I    +P        +T D   L  ++  T    +  + I+ + 
Sbjct: 11  MAFILIIWQIVVLVWKIPAFILPGPAAVFSALTADAQVLLSHSVTTLNEAVIGLAIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                      VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ---ATYCVSGAVVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|225626755|ref|ZP_03784794.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
 gi|260169791|ref|ZP_05756602.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. F5/99]
 gi|225618412|gb|EEH15455.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti str. Cudo]
          Length = 403

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|291453833|ref|ZP_06593223.1| permease membrane component [Streptomyces albus J1074]
 gi|291356782|gb|EFE83684.1| permease membrane component [Streptomyces albus J1074]
          Length = 215

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ +   +      +S   G +       + ++P L  +  
Sbjct: 12  QQLLADAYQHASAVFQCMVVATVIGVLIGVATYRSGWAGNLATLTTSSILTVPSLAMIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                  + A+    +  +  +    L  +   L + ++   +S W 
Sbjct: 72  LIPLVGLGV--------APTVIALTLYGLLPIVRNSIVGLRGVDATLVDAAKGIGMSRWA 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD- 237
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   I     
Sbjct: 124 RLLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAFASG------PGLGNEIFRGISSLGS 176

Query: 238 ---LLAILYAMLTMLGVIFLYD 256
              L  +L   L ++ +  L+D
Sbjct: 177 ANALNQVLAGTLAVIVLALLFD 198



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A++I + +G+         +        +   P+     L++  V        
Sbjct: 25  VFQCMVVATVIGVLIGVATYRSGWAGNLATLTTSSILTVPSLAMIGLLIPLVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A    ++ W     + LP  +P  +TG
Sbjct: 85  IALTLYGLL----PIVRNSIVGLRGVDATLVDAAKGIGMSRWARLLRVELPLAWPPILTG 140

Query: 510 AITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +     G A  A+  S       I    + LG+         +  +V+ G L +   
Sbjct: 141 IRVSTQMLMGIAAIAAFASGPGLGNEIFRGISSLGS-------ANALNQVLAGTLAVIVL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|221209333|ref|ZP_03582314.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
 gi|221170021|gb|EEE02487.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD1]
          Length = 392

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 63/145 (43%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + ASR       ++  +L+         A++  L  V++P+L+I+Q+IP +      + 
Sbjct: 182 WREASRHLSLAGGSVAAALVAGLPLGIACARAAPLRAVVMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+ + + +  ++P ++  + +
Sbjct: 302 MTRAQRLFRVDLVLALPVILSGVRV 326



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  A +  +P+GI       + + + P   ++   P+   + L+++ +     +  L  +
Sbjct: 196 VAAALVAGLPLGIACARAAPLRAVVMPVLNIVQTIPSIAMYGLMMAPLGLLAAHVPLAAA 255

Query: 454 L------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L             +   +   I  +V  G +  P    E A +  +T  +    + L  
Sbjct: 256 LGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMGMTRAQRLFRVDLVL 315

Query: 502 IFPYYVTGAITAC 514
             P  ++G     
Sbjct: 316 ALPVILSGVRVVL 328


>gi|254695008|ref|ZP_05156836.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 3 str. Tulya]
          Length = 403

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|254451383|ref|ZP_05064820.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198265789|gb|EDY90059.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 280

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + D    I  G +T        ++  I    V +       ++  I P    +AA P
Sbjct: 76  PILWADFEQTILKGALT------GYVVGMIAAFTVALLADRSEFLTKGILPVGAFMAALP 129

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+ V  +     +    + +++ F     IL N +AG        +++  ++   
Sbjct: 130 IVGTAPIFVKWLGSDWHSKAAVVGVMVFF----PILVNTVAGLKDTSVMQRDLMRTYGAG 185

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W     + LP   P+   G   A   A   +IV+E          T G+G  I+ S  +
Sbjct: 186 YWPTLFKLRLPAALPFMFNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQ 240

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
            +   V   +++      A 
Sbjct: 241 LALDMVWAEIVVAALAGSAF 260



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 90/242 (37%), Gaps = 16/242 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +    +   ++ +L         P  I   V    ++  L     +T L+  L
Sbjct: 34  LIPIIFGVTIIAMWEVLVTMLGVSPIILPPPSSIA--VRFAGEIPILWADFEQTILKGAL 91

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +  V+ ++  F  A LA +S  L   ++P+   M ++PI+G     V +  + +  K   
Sbjct: 92  TGYVVGMIAAFTVALLADRSEFLTKGILPVGAFMAALPIVGTAPIFVKWLGSDWHSKAAV 151

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F         +  +    L +      ++ R++    W   + L +P ++P + 
Sbjct: 152 VGVMVFF--------PILVNTVAGLKDTSVMQRDLMRTYGAGYWPTLFKLRLPAALPFMF 203

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ +      + +E         P  G+G  I+ ++ +  L  +   ++       
Sbjct: 204 NGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEIVVAALAGS 258

Query: 254 LY 255
            +
Sbjct: 259 AF 260


>gi|327440568|dbj|BAK16933.1| ABC-type proline/glycine betaine transport systems, permease
           component [Solibacillus silvestris StLB046]
          Length = 227

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 16/187 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            ++++ +         +K  ++   ++ + +I+Q+IP L  +   ++             
Sbjct: 38  GVLLASIIGIPIGIWISKFPKISGPVITLANIIQTIPALALMAMIMLVLGLG-------- 89

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           +   I  +F   +  +  + +  + NI R L +  R   ++  Q  + + +P S+  ++ 
Sbjct: 90  KTTVIVTVFFYSLLPIVKNTFVGIRNIDRSLTDAGRGMGMTKLQILYMVELPLSLSVIIT 149

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIF 253
            + ++       +V +  IV     I   G+G  I          AI+ A  L    +  
Sbjct: 150 GIRIA-------LVVAIGIVAIGAFIGAGGLGDIIIRGTNATSGTAIILAGALPTALMAI 202

Query: 254 LYDQLLF 260
           L D LL 
Sbjct: 203 LADVLLL 209



 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 66/197 (33%), Gaps = 12/197 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           YV           V  +++ASII IP+GIWI   P IS  +   A ++   PA     ++
Sbjct: 23  YVFSQFLAHFQLSVYGVLLASIIGIPIGIWISKFPKISGPVITLANIIQTIPALALMAMI 82

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +          + + + F +   I+ N   G         +      +T  +    +
Sbjct: 83  MLVLGLGKTT----VIVTVFFYSLLPIVKNTFVGIRNIDRSLTDAGRGMGMTKLQILYMV 138

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVV 556
            LP      +TG   A   A     +      G       GLG  I   T   S    ++
Sbjct: 139 ELPLSLSVIITGIRIALVVAIGIVAIGAFIGAG-------GLGDIIIRGTNATSGTAIIL 191

Query: 557 LGVLIMCCFVLALNRFL 573
            G L      +  +  L
Sbjct: 192 AGALPTALMAILADVLL 208


>gi|312144109|ref|YP_003995555.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
 gi|311904760|gb|ADQ15201.1| binding-protein-dependent transport systems inner membrane
           component [Halanaerobium sp. 'sapolanicus']
          Length = 220

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 76/203 (37%), Gaps = 13/203 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ ++ +Y       ++ ++ +SL        +     +    L+     + ++P +   
Sbjct: 10  NLDNIIEYTFAHLYLLMISITLSLFLWLSVGIIIRNKSKTAKTLIAFGSFIMAVPSISLY 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +                +A+FA+    +  +  ++Y +L  +   + E +R+  +S 
Sbjct: 70  GILMTI------PAFGLNIRSAVFALVLYSMIPILRNVYTALNGVNPAIIESARAMGMSE 123

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q  W +  P ++P ++  + +++       +A+  + +G+       +G  I   I   
Sbjct: 124 RQILWKIQFPLALPVIIAGVRVALVM--MVGIATLAVFIGERN-----LGQLIYQGIVRT 176

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               I+   + +  +    D L+
Sbjct: 177 RTEMIVTGAVLVSAISVSVDILM 199



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 80/206 (38%), Gaps = 9/206 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + ++ + ++  +I      ++ +++ I ++  +W+ VGI I  +   +  +  F   + A
Sbjct: 3   IINYFFGNLDNIIEYTFAHLYLLMISITLSLFLWLSVGIIIRNKSKTAKTLIAFGSFIMA 62

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   + ++   +  + LN    +  L+++     IL NV    +       E A +  
Sbjct: 63  VPSISLYGIL-MTIPAFGLNIRSAVFALVLYSMI-PILRNVYTALNGVNPAIIESARAMG 120

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++  +    I  P   P  + G   A       + ++      +       LG  I +  
Sbjct: 121 MSERQILWKIQFPLALPVIIAGVRVALVMMVGIATLAVFIGERN-------LGQLIYQGI 173

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
            +     +V G +++    ++++  +
Sbjct: 174 VRTRTEMIVTGAVLVSAISVSVDILM 199


>gi|227508104|ref|ZP_03938153.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227192333|gb|EEI72400.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 320

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 75/174 (43%), Gaps = 7/174 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +V +LP   +   + +L+A+V +               +R    L P+++++  IP + +
Sbjct: 92  EVGALPMIVTSFCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVY 151

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V    + + G   G  LA    +F   +  +T     S+ ++P      S +
Sbjct: 152 GFIGLSVIVPLIRHAFGGTGFGI-LAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLA 210

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              + WQ  + + +  + PG++  ++  M+  +   +A +M+ +G+  +   G+
Sbjct: 211 LGATRWQTIYKVVLRAAAPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
             + ++A+++  P  +G+ +          +  +QP  +LL   P+ V+  + +S +   
Sbjct: 103 FCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVYGFIGLSVIVPL 162

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +      +    +++F      + ++ I    + P  ++  + +   T W+    +
Sbjct: 163 IRHAFGGTGFGILAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLALGATRWQTIYKV 222

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +L    P  +T  I     A+  ++  ++   G+  L   GL
Sbjct: 223 VLRAAAPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263


>gi|297203145|ref|ZP_06920542.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197717471|gb|EDY61505.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 229

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 75/187 (40%), Gaps = 14/187 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++  LL     + L  + R L   ++ +  ++ +IP L F    + Y          
Sbjct: 27  LLPVLAGLLIALPLSQLCVRFRWLYPPVLWVTTVLYAIPSLAFFVVLIDYTGQ------- 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             EL  +  +    +  +  ++   + ++P++    + +      +++  + +P ++P +
Sbjct: 80  -TELTVMIPLTVYTLVILVPAIVDGVRSVPQETLAAATAMGFGPVRRYVQVQLPIAVPAI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++       V +  ++ VG  +     +G+ I  A         + A+LTM  + 
Sbjct: 139 IAGLRVA------TVSSISLVSVGALIGNQGALGNLINDANIYNRPELAVNAVLTMAALA 192

Query: 253 FLYDQLL 259
            L D LL
Sbjct: 193 ILADGLL 199



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 12/205 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLI--IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           F     L   WLG I +     L+  +   +I +P+         +   +     +L A 
Sbjct: 5   FDIPSDLQHSWLGLIGLHLREALLPVLAGLLIALPLSQLCVRFRWLYPPVLWVTTVLYAI 64

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  FF +++       L   + L++  +      I    + G  + P +    A++   
Sbjct: 65  PSLAFFVVLIDYTGQTELTVMIPLTVYTLVILVPAI----VDGVRSVPQETLAAATAMGF 120

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              R +  + LP   P  + G   A   + +   V  +            LG  I ++  
Sbjct: 121 GPVRRYVQVQLPIAVPAIIAGLRVATVSSISLVSVGALIGNQGA------LGNLINDANI 174

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                  V  VL M    +  +  L
Sbjct: 175 YNRPELAVNAVLTMAALAILADGLL 199


>gi|260434042|ref|ZP_05788013.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417870|gb|EEX11129.1| ABC transporter, permease protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 281

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 91/269 (33%), Gaps = 10/269 (3%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            + L         +      +     +++ +       +   W  +V G+ + +      
Sbjct: 6   LAILLWLAGWWLNSRLASGPYADTRAVRILAPLIFGLTVIGVWELLVRGLEVPLVILPAP 65

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            ++    +  +  +      T+ +  +   +I       + I +     +   + P    
Sbjct: 66  SVIWDRFWDSLPILWADFVQTIIKGALSGYVIGCGAAFLMAIAVDRWDFLRLGLLPVGNF 125

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +AA P     P++V    +   +    + +++ F     +L N +AG        +++  
Sbjct: 126 VAALPIVGTAPILVMWFGFDWHSKAAVVVVMVFF----PMLVNTVAGLREATAMQRDLME 181

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           ++  T W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I+
Sbjct: 182 TYAATYWQSFLKLRLPAAMPFIFNGLKISTTLALIGAIVAEFFGS-----PTLGMGFRIS 236

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            S  + S   V   +++      A    +
Sbjct: 237 TSVGQLSLDMVWAEIVVAALAGTAFYGLV 265



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS  VI     F+ A    +   L + L+P+ + + ++PI+G     V++F   +  K  
Sbjct: 92  LSGYVIGCGAAFLMAIAVDRWDFLRLGLLPVGNFVAALPIVGTAPILVMWFGFDWHSKAA 151

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +   F         M  +    L        ++  ++  + WQ F  L +P +MP +
Sbjct: 152 VVVVMVFF--------PMLVNTVAGLREATAMQRDLMETYAATYWQSFLKLRLPAAMPFI 203

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      + +E         P  G+G  I+ ++ +  L  +   ++      
Sbjct: 204 FNGLKISTTLALIGAIVAEFFGS-----PTLGMGFRISTSVGQLSLDMVWAEIVVAALAG 258

Query: 253 FLYDQLL 259
             +  L+
Sbjct: 259 TAFYGLV 265


>gi|90422096|ref|YP_530466.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
 gi|90104110|gb|ABD86147.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB18]
          Length = 276

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 7/163 (4%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P+A +L   P     PL++      +L  +  +         + +L N   
Sbjct: 101 SRWLEFALLPYAIILQVTPVIAIAPLLLI-----YLPQDTAVIACAFIVAFFPVLANTTL 155

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G S+   +   +   +  +  +    + LP   PY + G   A G +   ++V+E+A+  
Sbjct: 156 GLSSVDRNLAGLFRLYGASRLQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGS 215

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   L   IAES+ + + P +   +L++    + +   L
Sbjct: 216 AGAGSG--LAYRIAESSYRLNIPRMFAALLLLSLAGIVIYGLL 256



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR L   L+P   I+Q  P++      ++Y         +  + A I   F    + +  
Sbjct: 101 SRWLEFALLPYAIILQVTPVIAIAPLLLIY---------LPQDTAVIACAFIVAFFPVLA 151

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    L ++ R+L  + R +  S  Q    L +P ++P ++  + ++        V +E+
Sbjct: 152 NTTLGLSSVDRNLAGLFRLYGASRLQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEI 211

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                       +   IA +    ++  +  A+L +     +   LL
Sbjct: 212 AAGSAGAGSG--LAYRIAESSYRLNIPRMFAALLLLSLAGIVIYGLL 256


>gi|323340414|ref|ZP_08080671.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus ruminis ATCC 25644]
 gi|323092190|gb|EFZ34805.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus ruminis ATCC 25644]
          Length = 302

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 73  LSAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
            +  V+S L    +A          ++     L P+++++  IP + +    LT  V + 
Sbjct: 86  FAVTVLSALTATPFALAIGLFTTQYAKNGAKFLQPVIELLVGIPSVVYGYVGLTVIVPFI 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             ++ G   G     I   F   +  +T     SL  +P    + S +   + WQ  + +
Sbjct: 146 RKVFGGTGFGILSGTIVL-FVMVLPTITSLTIDSLKAVPLHYRQASLALGATRWQTIYKV 204

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  S PG+   ++  M+  +   +A +M++  
Sbjct: 205 ILRASAPGIFTAVIFGMARAFGEALAVQMVIGN 237



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 59/159 (37%), Gaps = 12/159 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-----PHISSKIQPFAQLLAAFPANVF----FPLVVSCV 441
             + +++++   P  + IG        + +  +QP  +LL   P+ V+      ++V  +
Sbjct: 86  FAVTVLSALTATPFALAIGLFTTQYAKNGAKFLQPVIELLVGIPSVVYGYVGLTVIVPFI 145

Query: 442 --SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +      +    +++F      + +  I    A P  +++ + +   T W+    +I
Sbjct: 146 RKVFGGTGFGILSGTIVLFVMVLPTITSLTIDSLKAVPLHYRQASLALGATRWQTIYKVI 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           L    P   T  I     A+  ++  ++       +  +
Sbjct: 206 LRASAPGIFTAVIFGMARAFGEALAVQMVIGNACLMPKS 244


>gi|269797021|ref|YP_003316476.1| proline/glycine betaine ABC transporter permease [Sanguibacter
           keddieii DSM 10542]
 gi|269099206|gb|ACZ23642.1| ABC-type proline/glycine betaine transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 238

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 18/214 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + +Y        L A+ I+L+     A LA     L   LV    ++ +IP L   
Sbjct: 33  NSDEILRYLGEHVSLTLQAIAIALVVAIPLAALAHAWPWLSGPLVATTGVLYTIPSLALF 92

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +  +     ++G  L A+  +          +    L  +   + + +R      
Sbjct: 93  AVVYPFIRDRRSTVLLGLVLYALLLLVR--------NTLVGLRGVDPAVTDAARGLGYGR 144

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+  + + +P ++P ++  + ++        V++  +V    VI   G+G  +       
Sbjct: 145 WRMLFTVEMPNALPAVITGLRLA-------SVSTVALVTVGVVIGYGGLGQLMFRGFTSG 197

Query: 237 DLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWS 267
               I+ A L  L +  L D    L+ R +  WS
Sbjct: 198 YHAQIMTATLLCLALGLLIDLVLYLVGRLVTPWS 231



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 11/169 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  I IA ++ IP+       P +S  +     +L   P+   F +V   +        L
Sbjct: 49  LQAIAIALVVAIPLAALAHAWPWLSGPLVATTGVLYTIPSLALFAVVYPFIRDRRSTVLL 108

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +         N + G         + A       WR    + +P   P  +TG 
Sbjct: 109 GLVLYALLLLV----RNTLVGLRGVDPAVTDAARGLGYGRWRMLFTVEMPNALPAVITGL 164

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
             A         V  V  +G       GLG  +      G   +++   
Sbjct: 165 RLASVSTVALVTVGVVIGYG-------GLGQLMFRGFTSGYHAQIMTAT 206


>gi|221200295|ref|ZP_03573337.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
 gi|221205974|ref|ZP_03578988.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221173986|gb|EEE06419.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2]
 gi|221179636|gb|EEE12041.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia multivorans CGD2M]
          Length = 392

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 63/145 (43%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + ASR       ++  +L+         A++  +  V++P+L+I+Q+IP +      + 
Sbjct: 182 WREASRHLSLAGGSVAAALVAGLPLGIACARAAPVRAVVMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+ + + +  ++P ++  + +
Sbjct: 302 MTRAQRLFRVDLVLALPVILSGVRV 326



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  A +  +P+GI       + + + P   ++   P+   + L+++ +     +  L  +
Sbjct: 196 VAAALVAGLPLGIACARAAPVRAVVMPVLNIVQTIPSIAMYGLMMAPLGLLAAHVPLAAA 255

Query: 454 L------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L             +   +   I  +V  G +  P    E A +  +T  +    + L  
Sbjct: 256 LGVRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPHVTEAARAMGMTRAQRLFRVDLVL 315

Query: 502 IFPYYVTGAITAC 514
             P  ++G     
Sbjct: 316 ALPVILSGVRVVL 328


>gi|114761251|ref|ZP_01441166.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Pelagibaca bermudensis HTCC2601]
 gi|114545499|gb|EAU48501.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 224

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP--------ILDIMQSIPI 112
           L +   +T   +  +  +  +F        A S+R  ++  P        +++  +S+P 
Sbjct: 9   LLEATLQTLYMVAISGALGTIFGLPIGVYLAVSQRGELLSSPAVNKVLGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  + V  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRLIAGTSIGTT-AAIVPLTIAAVPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG+   + +++
Sbjct: 127 GATPLQIIRKVLIPEALPGITLGLTLAV 154



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 51/162 (31%), Gaps = 12/162 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG--------FRPHISSKIQPFAQLLAAFPA 430
           ++     T++ V +   + +I  +P+G+++           P ++  +        + P 
Sbjct: 9   LLEATLQTLYMVAISGALGTIFGLPIGVYLAVSQRGELLSSPAVNKVLGLVVNATRSVPF 68

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +   + +   +      ++  +  ++        +I   V        +   E A +  
Sbjct: 69  IILV-VAIIPFTRLIAGTSIGTTAAIVPLTIAAVPFIARLVENAIREVDSGLIEAARAMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            T  +  R +++P   P    G   A       S +      
Sbjct: 128 ATPLQIIRKVLIPEALPGITLGLTLAVVSLIGYSAMVGAVGG 169


>gi|298294095|ref|YP_003696034.1| binding-protein-dependent transporters inner membrane component
           [Starkeya novella DSM 506]
 gi|296930606|gb|ADH91415.1| binding-protein-dependent transport systems inner membrane
           component [Starkeya novella DSM 506]
          Length = 250

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 54/166 (32%), Gaps = 4/166 (2%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  V    A  +       +V                 T+   ++ +  A +  I +G+
Sbjct: 20  VWELVGRSGATFLIPPLSDVVVAAVALVQTGTWQAAALTTLNSFLLGMFFAIVAGIVIGV 79

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            +G      + +  +  +  + P +   P+++             + + +   + W I+ 
Sbjct: 80  LMGRFAAADNLLGIWVNIFVSAPLSALVPVLMILFGMGETT----VVVTVFLFSVWIIVL 135

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +  AG    P    E+  S+  + +  +  IIL    P  + G   
Sbjct: 136 DTRAGIQGVPASLIEMGRSYGASRFALYFKIILLAALPEILAGIRL 181



 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T    L  M  +++   V   L  +      +L   ++I  S P+   +   ++ F 
Sbjct: 56  ALTTLNSFLLGMFFAIVAGIVIGVLMGRFAAADNLLGIWVNIFVSAPLSALVPVLMILFG 115

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E   +  +F   VW +       +  +P  L E+ RS+  S +  ++ + 
Sbjct: 116 MG--------ETTVVVTVFLFSVWIIVLDTRAGIQGVPASLIEMGRSYGASRFALYFKII 167

Query: 185 VPFSMPGLVWNMMM 198
           +  ++P ++  + +
Sbjct: 168 LLAALPEILAGIRL 181


>gi|320010045|gb|ADW04895.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 224

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G+  ++  ++     +             ++   + + +A +I +PV +++G       
Sbjct: 1   MGVIAEAWTWLTTGANWSGDGGAAHRLAEHLYVSGIALAVACLIALPVALYLGHVGKGGG 60

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                + +  A P      L +             ++L++       +L N   G +   
Sbjct: 61  LAVNLSNVGRAVPVFAVLALFMMTPLRNSGYLPTVIALVLF--AVPPLLTNAYVGMTEVD 118

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
              +E A    ++G + +  + LP  +P  +TG  +A       + ++ +   G      
Sbjct: 119 RSVREAARGMGMSGTQLFVRVELPLAYPMIMTGLRSAAVQVIATASIAAMVGLG------ 172

Query: 537 TGLGAYIAESTEKGSFPEVV 556
            GLG  I          +V 
Sbjct: 173 -GLGRIITAGFNTYDTAQVF 191



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ ++ L     A       + G + V + ++ +++P+       V+    + P +  G
Sbjct: 36  IALAVACLIALPVALYLGHVGKGGGLAVNLSNVGRAVPVFA-----VLALFMMTPLRNSG 90

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L  + A+    V  +  + Y  +  + R + E +R   +SG Q F  + +P + P ++
Sbjct: 91  -YLPTVIALVLFAVPPLLTNAYVGMTEVDRSVREAARGMGMSGTQLFVRVELPLAYPMIM 149

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             +    S     +  + +      ++ L G+G  I       D   + 
Sbjct: 150 TGLR---SAAVQVIATASIAA----MVGLGGLGRIITAGFNTYDTAQVF 191


>gi|239637076|ref|ZP_04678070.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           warneri L37603]
 gi|239597426|gb|EEQ79929.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           warneri L37603]
          Length = 309

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 69/188 (36%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +++  ++   L        P    +    T  +  +      T   M++ + IS++
Sbjct: 44  LIGLIVLAALLVDTLIKGAGHLTPSFFTNFSSSTPSMAGIKGALVGTLWLMITIIPISIV 103

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      A+       +   +  +  +P + F    +  F+     + +    + 
Sbjct: 104 LGVGTAIYLEEYARKNPFTNFVKVCISNLAGVPSVVFGLLGLTLFVRGMGVESLSLGKSI 163

Query: 139 IFAIFTSQVWN---MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           I    T  +     +  +  +++  +P  + E S     + WQ  + + +P ++PG++  
Sbjct: 164 IAGALTMSLLILPVIIVAAQEAIRAVPNSVREASYGLGANKWQTIYKVVLPAALPGILTG 223

Query: 196 MMMSMSGG 203
            ++++S  
Sbjct: 224 FILALSRA 231



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 10/142 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVS 442
           T++ ++ +I I+ ++ +   I++      +            LA  P+ VF  L ++   
Sbjct: 90  TLWLMITIIPISIVLGVGTAIYLEEYARKNPFTNFVKVCISNLAGVPSVVFGLLGLTLFV 149

Query: 443 YYHLNPNLWLSLLMIFGTQ-------WYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                 +L L   +I G           I+        A PN  +E +       W+   
Sbjct: 150 RGMGVESLSLGKSIIAGALTMSLLILPVIIVAAQEAIRAVPNSVREASYGLGANKWQTIY 209

Query: 496 YIILPGIFPYYVTGAITACGGA 517
            ++LP   P  +TG I A   A
Sbjct: 210 KVVLPAALPGILTGFILALSRA 231


>gi|220909395|ref|YP_002484706.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
 gi|219866006|gb|ACL46345.1| binding-protein-dependent transport systems inner membrane
           component [Cyanothece sp. PCC 7425]
          Length = 205

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +       A++I++      A L     RL M ++  L ++ ++P L  +   +  F 
Sbjct: 15  LLQHLQITTLALLIAVGIALPLALLVYHYPRLNMPVLGTLGMLYTVPSLALMILLIPLFG 74

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         + AI       +  ++   L +IP  + E  R   +S WQ +W++ 
Sbjct: 75  LNRT--------TVVTAIVLYSQVILVRNLIAGLESIPAAILEAGRGMGMSAWQCWWWVQ 126

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP  +P  +  + ++        V    I          G+G  +   I +     I   
Sbjct: 127 VPLILPIFIAGVRLA-------AVVGIGIGTIGAKFGAGGLGVLLFDGIAQNRADKIWAG 179

Query: 245 MLTMLGVIFLYDQLL 259
            + +  +    +  L
Sbjct: 180 AIAVAILALGLNFSL 194



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           VI L    +    + ++IA  I +P+ + +   P ++  +     +L   P+     L++
Sbjct: 11  VIPLLLQHLQITTLALLIAVGIALPLALLVYHYPRLNMPVLGTLGMLYTVPSLALMILLI 70

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        +   ++  +Q  ++ N+IAG  + P    E      ++ W+ W ++ 
Sbjct: 71  PLFGLNRTT----VVTAIVLYSQVILVRNLIAGLESIPAAILEAGRGMGMSAWQCWWWVQ 126

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P I P ++ G   A        +V              GLG  + +   +    ++  G
Sbjct: 127 VPLILPIFIAGVRLAA-------VVGIGIGTIGAKFGAGGLGVLLFDGIAQNRADKIWAG 179

Query: 559 VLIMCCFVLALN 570
            + +    L LN
Sbjct: 180 AIAVAILALGLN 191


>gi|209550618|ref|YP_002282535.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536374|gb|ACI56309.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 375

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 67/180 (37%), Gaps = 9/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++  ++  +    V +       +   + P   +++A P     P++V    +   +  
Sbjct: 184 VLIGYVVGCLSGFAVAVLADRITFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSK- 242

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N +AG +A  +  +++  ++  + W+    + LP   P+    
Sbjct: 243 ---AAVVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLLKLKLPAAMPFIFNA 299

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E      +     G+G  I+    + +   V   + I        
Sbjct: 300 LKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEIGRMNVDMVWAEIAIAALAGSIF 354



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 92/240 (38%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF     +L                 P  I   +  +L +  L     +T  + 
Sbjct: 126 QLLIPAIFGAWILILWEAATRGAGIPFIILPPPSAIGARIMASLPI--LGADVRQTIFKA 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   V+  L  F  A LA +   L   L+PI +++ ++PI+G     V++F   +P K 
Sbjct: 184 VLIGYVVGCLSGFAVAVLADRITFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++  S WQ    L +P +MP 
Sbjct: 244 A--------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASSDWQTLLKLKLPAAMPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  I   ++  +++A + +  +
Sbjct: 296 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVD-MVWAEIAIAAL 349


>gi|107103406|ref|ZP_01367324.1| hypothetical protein PaerPA_01004476 [Pseudomonas aeruginosa PACS2]
 gi|218889829|ref|YP_002438693.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254242582|ref|ZP_04935904.1| hypothetical protein PA2G_03336 [Pseudomonas aeruginosa 2192]
 gi|126195960|gb|EAZ60023.1| hypothetical protein PA2G_03336 [Pseudomonas aeruginosa 2192]
 gi|218770052|emb|CAW25814.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 220

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 77/194 (39%), Gaps = 8/194 (4%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
            ++ D   V  L    +  V+V + +A ++ +P+G+ +     ++  +Q  A ++   P+
Sbjct: 7   LSHLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPS 66

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              F L++   S +        ++  +   +   IL N     +      +E      +T
Sbjct: 67  IALFGLLMPVYSVFGQGLGPLPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGMT 126

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+  R + +P   P  + G  TA         ++ V   G       GLG  I  S  +
Sbjct: 127 FWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSISQ 179

Query: 550 GSFPEVVLGVLIMC 563
            + P +V+G +++ 
Sbjct: 180 SNMPMLVVGAVLVS 193



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 77/194 (39%), Gaps = 10/194 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            LD   + Q   +  L +L A+ +++L       L  +   L   L     +M +IP + 
Sbjct: 9   HLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLMTRFTWLAGPLQGAATVMLTIPSIA 68

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                +  +     G      L AI A+F   +  +  + Y +L  +   + E  +   +
Sbjct: 69  LFGLLMPVYSVFGQGLGP---LPAITAVFLYSLLPILRNTYLALTGVEAGIREAGKGIGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           + WQ+   + +P ++P ++  +  ++      +  + +I  G       G+G  I  +I 
Sbjct: 126 TFWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTIAAVIGAG-------GLGVLILTSIS 178

Query: 235 EQDLLAILYAMLTM 248
           + ++  ++   + +
Sbjct: 179 QSNMPMLVVGAVLV 192


>gi|239929366|ref|ZP_04686319.1| glycine betaine ABC transporter integral membrane protein
           [Streptomyces ghanaensis ATCC 14672]
          Length = 322

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 9/157 (5%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ ++  L   I         V  +   + V  +   +  T  ++L+A+ ++L+  F   
Sbjct: 96  VLLLVATLAWLIGTWRTALTAVLAMA-AIGVLGVWNPSLDTLSQVLAAVAVTLVVGFATG 154

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             AA+S R+  +L P+LD+ Q++P   +L   V  F       V  A + A+ A+     
Sbjct: 155 IAAARSDRVDRLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI-- 212

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   Q L  +     E +RS   +G Q+   + 
Sbjct: 213 ------TAQGLRQVDPAALESARSLGATGAQQLRQVQ 243



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 61/224 (27%), Gaps = 13/224 (5%)

Query: 275 TTGIYPADSWVLYLFRK-TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
           T  +   D WV+ L       + ++    ++    +        R    +     +    
Sbjct: 31  TARLEWPDGWVVSLVEPVNRAVGWMTDHLYSGVPVIGGTADWAARFTTWVLDPIRDGLQW 90

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L     +  +  + W            W++    V       VL V      T+ +V+  
Sbjct: 91  LPWWSVLLLVATLAWLI--------GTWRTALTAVLAMAAIGVLGVWNPSLDTLSQVLAA 142

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + +  ++    GI       +   ++P   +    P  V+   VV+              
Sbjct: 143 VAVTLVVGFATGIAAARSDRVDRLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAV 202

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             G         E A S   TG +  R +
Sbjct: 203 VYALPAVVRI----TAQGLRQVDPAALESARSLGATGAQQLRQV 242


>gi|160934972|ref|ZP_02082358.1| hypothetical protein CLOLEP_03848 [Clostridium leptum DSM 753]
 gi|156866425|gb|EDO59797.1| hypothetical protein CLOLEP_03848 [Clostridium leptum DSM 753]
          Length = 446

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 83/227 (36%), Gaps = 18/227 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSI 110
           +  S         L  ++  V +++       L A        + +  V+ P + ++  I
Sbjct: 212 EPKSGVYGILPLILSSIAGTVGAVIIGVPIGILTAVFLSETAPKWVASVVRPAVQLLAGI 271

Query: 111 PILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDL 165
           P + +    +   V    +++PG+ IG  L A+  I    V     S+ + SL  +P   
Sbjct: 272 PSVVYGFFGMLIIVPAIRSMFPGQTIGDSLLAVILILAIMVLPTIVSVSETSLRAVPVSY 331

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-------T 218
            E S +   +  +  + + VP +  G++  +++ +       +A  M+            
Sbjct: 332 REASLALGTTPVKTIFKVTVPAAKSGILAGVILGVGRAIGETMAVIMVAGNVVQMPSILG 391

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            + L   G  I ++         L+A+  +L V  +   + F  +  
Sbjct: 392 TVRLMTTGIVIEMSYSSGLHRQALFAIGLVLFVFIMIVNIAFTYISR 438



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 86/255 (33%), Gaps = 17/255 (6%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            I Y      + +      +            E+  ++ +   V  ++ I  + +V G  
Sbjct: 136 IISYQWPFLLTLILGLAAGVLAIWTKGGEKLAESIFRIFACVSVGSVVIITVYMIVSGAP 195

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----- 411
                    ++    T  +    ++     +   +   + A II +P+GI          
Sbjct: 196 AIAEIGLGNFLFG--TEWEPKSGVYGILPLILSSIAGTVGAVIIGVPIGILTAVFLSETA 253

Query: 412 -PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              ++S ++P  QLLA  P+ V+         P + S      +  +L   +L++     
Sbjct: 254 PKWVASVVRPAVQLLAGIPSVVYGFFGMLIIVPAIRSMFPGQTIGDSLLAVILILAIMVL 313

Query: 463 YILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             + +V      A P  ++E + +   T  +    + +P      + G I   G A   +
Sbjct: 314 PTIVSVSETSLRAVPVSYREASLALGTTPVKTIFKVTVPAAKSGILAGVILGVGRAIGET 373

Query: 522 IVSEVASWGHIHLRT 536
           +   + +   + + +
Sbjct: 374 MAVIMVAGNVVQMPS 388


>gi|328466083|gb|EGF37255.1| phosphate ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 218

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 98  MVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
            VL P+++++  IP + +    L+  V +  N++ G   G  LA  F +F   +  +T  
Sbjct: 35  KVLQPVIELLVGIPSVVYGFIGLSVIVPFIRNIFGGTGFGI-LAGTFVLFVMILPTVTSM 93

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              +L  +PR   E S +   + WQ  + + +  ++PG++  ++  M+  +   +A +M+
Sbjct: 94  TVDALKAVPRHYREASLALGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMV 153

Query: 214 VVG 216
           +  
Sbjct: 154 IGN 156



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 7/130 (5%)

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-N 467
           +  +QP  +LL   P+ V+  + +S +       +      +     ++F      +   
Sbjct: 34  AKVLQPVIELLVGIPSVVYGFIGLSVIVPFIRNIFGGTGFGILAGTFVLFVMILPTVTSM 93

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +    A P  ++E + +   T W+    ++L    P  +TG +     A+  ++  ++ 
Sbjct: 94  TVDALKAVPRHYREASLALGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMV 153

Query: 528 SWGHIHLRTT 537
                 L   
Sbjct: 154 IGNAALLPKN 163


>gi|240116215|ref|ZP_04730277.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           PID18]
 gi|260439972|ref|ZP_05793788.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI2]
 gi|268601877|ref|ZP_06136044.1| ABC transporter [Neisseria gonorrhoeae PID18]
 gi|291043258|ref|ZP_06568981.1| ABC transporter, permease [Neisseria gonorrhoeae DGI2]
 gi|268586008|gb|EEZ50684.1| ABC transporter [Neisseria gonorrhoeae PID18]
 gi|291012864|gb|EFE04847.1| ABC transporter, permease [Neisseria gonorrhoeae DGI2]
          Length = 229

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            I+++R VV I +A I  +  G+  G      + ++P   +L A P  ++  + +    +
Sbjct: 73  GISLWRSVVGIPVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGF 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            + +    + +L+   T      +   G ++     +E+  ++ +   +  RY+ +P + 
Sbjct: 133 GNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLT 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            Y ++    A      A I++E+         + G+GA IA++    
Sbjct: 189 DYVISSVGVAVAMGVKAVIMAELLG------ASKGVGARIADARAML 229



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 86/222 (38%), Gaps = 19/222 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-----TTLRML 73
           ++   A + V  ++  L            +   V +      L ++        +  R +
Sbjct: 21  LWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKSLDLLKHFQENEIGISLWRSV 80

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             + ++L+       +A   +    +L P++ I+ ++P + ++   + +F    P     
Sbjct: 81  VGIPVALIAGLAAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFGNP----- 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + +F I          S    + ++ +  EE+  +++L   +K  YL +P     ++
Sbjct: 136 ---SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIPHLTDYVI 192

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 193 SSVGVAVAMGVKAVIMAELLGASK------GVGARIADARAM 228


>gi|150015925|ref|YP_001308179.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149902390|gb|ABR33223.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 251

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 87/222 (39%), Gaps = 14/222 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            + F+ +  +I ++++          +++++       +  +    +  R  ++ V++L+
Sbjct: 16  CIFFIGIWQLIAVIINNDIYIPRLEQVLEVIKNIFGDKNSLKIIFSSFYRTTTSYVLALI 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
           F+ +   LA        ++ P+    ++IP +  +  ++V+F       V G   A IF 
Sbjct: 76  FSMILGVLATVYPFFKYLMEPVNSFSKTIPTMVLVVLSLVWFDKDSTPFVAG--FAIIFP 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    + N           I + + ++++ + +S   K   + +P      +   + + S
Sbjct: 134 ILYEGIRNNLL-------QIDKKIIDMTKIYEVSLRNKIKKIYIPTMKSYFMSIFVSTFS 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +  V+A E+        P  GIGS I +     +   I  
Sbjct: 187 LTFKVVIAGEVYG-----QPKFGIGSQIQVEKVNFNTPGIFA 223



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 67/209 (32%), Gaps = 21/209 (10%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           + +   + +R     ++A I  + +G+     P     ++P        P  V   L + 
Sbjct: 56  LKIIFSSFYRTTTSYVLALIFSMILGVLATVYPFFKYLMEPVNSFSKTIPTMVLVVLSLV 115

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA----FPNDFKEVASSFHITGWRWWR 495
                          +  F   + IL+    G             ++   + ++     +
Sbjct: 116 WF------DKDSTPFVAGFAIIFPILY---EGIRNNLLQIDKKIIDMTKIYEVSLRNKIK 166

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I +P +  Y+++  ++     +   I  EV           G+G+ I       + P +
Sbjct: 167 KIYIPTMKSYFMSIFVSTFSLTFKVVIAGEV-----YGQPKFGIGSQIQVEKVNFNTPGI 221

Query: 556 VLGVLIMCCFVLA---LNRFLWHPLYLYG 581
              ++I+    L    LN+ L    Y + 
Sbjct: 222 FAWIVIIVIVSLVLEFLNKLLRKRTYRWS 250


>gi|205374198|ref|ZP_03226997.1| binding-protein-dependent transport systems inner membrane
           component [Bacillus coahuilensis m4-4]
          Length = 245

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +L + +++++       L  +   R+   ++   ++  Q+IP L  L   +      +  
Sbjct: 53  VLVSSILAIIIAVPAGILITRKGIRKAEWLVSNAVNFGQTIPSLAVLALMISILGIGF-- 110

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                   AIFA+F   +  +  +    + ++  DL + +R   ++  Q  + + +P + 
Sbjct: 111 ------KTAIFALFIYSLLPIYRNTVAGIDSLDEDLIDAARGMGMTPAQILFRIELPNAA 164

Query: 190 PGLVWNMMMSM 200
             ++  +  ++
Sbjct: 165 YSILAGIRTAV 175



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            VV G  I     SIG    ++ + +    + L       V+V  I+A II +P GI I 
Sbjct: 13  IVVYGFVIYFFIWSIGNGYFNYIFSETSTFLLLMRQHAELVLVSSILAIIIAVPAGILIT 72

Query: 410 FR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
            +        +          P+     L++S +              +   +   I  N
Sbjct: 73  RKGIRKAEWLVSNAVNFGQTIPSLAVLALMISILGIGFKT----AIFALFIYSLLPIYRN 128

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +AG  +   D  + A    +T  +    I LP      + G  TA 
Sbjct: 129 TVAGIDSLDEDLIDAARGMGMTPAQILFRIELPNAAYSILAGIRTAV 175


>gi|293556795|ref|ZP_06675358.1| ABC transporter, permease protein [Enterococcus faecium E1039]
 gi|291601127|gb|EFF31416.1| ABC transporter, permease protein [Enterococcus faecium E1039]
          Length = 247

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +++  I    +P        +  D   L  ++  T    +  +VI+ + 
Sbjct: 11  MAFILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLFHSVTTLNEAVLGLVIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++   + W+ +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQVIFLKTMGANTWKIYQIYKIPEGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                      VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ---ATYCVSGAVVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 78/228 (34%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + I W+   +I+            D   +++    T+   V+ ++IAS++  
Sbjct: 13  FILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLFHSVTTLNEAVLGLVIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +     W+ ++   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQVIFLKTMGANTWKIYQIYKIPEGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|317047440|ref|YP_004115088.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949057|gb|ADU68532.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 385

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 72/184 (39%), Gaps = 15/184 (8%)

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA- 137
           +LL         A+  R       +L+++Q++P +      +     L     + A    
Sbjct: 192 ALLIGVPLGIAIARHARWQQTAFSVLNLIQTVPSVALFGLLIAPLAGLAAQFPLLASWGI 251

Query: 138 -------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                  A+ A+    +  +  S+   L  +P ++ E +R   +S WQ+F +  +P ++P
Sbjct: 252 AGIGMAPALIALVLYALLPLVRSVVAGLQQVPAEVRETARGMGMSRWQQFCFAELPLALP 311

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
             +  + +        VV +  + V   +I   G G+ +   +    L  +L  ++ ++ 
Sbjct: 312 VWLSGLRV-------VVVQTLGLAVVAALIGAGGFGAILFQGLLSSALDLVLLGVIPVVA 364

Query: 251 VIFL 254
           +  +
Sbjct: 365 LAVI 368



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 70/185 (37%), Gaps = 19/185 (10%)

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-- 453
            A +I +P+GI I               L+   P+   F L+++ ++       L  S  
Sbjct: 191 PALLIGVPLGIAIARHARWQQTAFSVLNLIQTVPSVALFGLLIAPLAGLAAQFPLLASWG 250

Query: 454 ----------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                     + ++      ++ +V+AG    P + +E A    ++ W+ + +  LP   
Sbjct: 251 IAGIGMAPALIALVLYALLPLVRSVVAGLQQVPAEVRETARGMGMSRWQQFCFAELPLAL 310

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P +++G           ++V+ +   G       G GA + +     +   V+LGV+ + 
Sbjct: 311 PVWLSGLRVVVVQTLGLAVVAALIGAG-------GFGAILFQGLLSSALDLVLLGVIPVV 363

Query: 564 CFVLA 568
              + 
Sbjct: 364 ALAVI 368


>gi|253580777|ref|ZP_04858040.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847847|gb|EES75814.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 264

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 60/172 (34%), Gaps = 10/172 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     +T+   +V  +   ++   + + +   P ++   +P+  +L + P +   PL
Sbjct: 69  GSIFPHLSVTITETLVSFLFVVVLGAGMAVLLWTCPRLAKITEPYLVVLNSLPKSALAPL 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +        +    + IFG+    + N+  G      +  ++  +           
Sbjct: 129 LIVWLGANERTIIVCGMSVAIFGS----ILNLYTGFGEADPEKLKLIETLGGGKKEKLMK 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           IILP   P  ++      G      I+ E            GLG  I  S++
Sbjct: 185 IILPSSVPLLLSVMKVNIGLCLVGVIIGEFIGARK------GLGYLIIYSSQ 230



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 14/180 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + S T    L + +  ++     A L     RL  +  P L ++ S+P        +V+ 
Sbjct: 74  HLSVTITETLVSFLFVVVLGAGMAVLLWTCPRLAKITEPYLVVLNSLPKSALAPLLIVWL 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++     AIF            ++Y        +  ++  +      +K   +
Sbjct: 134 GANERTIIVCGMSVAIFGSI--------LNLYTGFGEADPEKLKLIETLGGGKKEKLMKI 185

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+P L+  M +++      V+  E I          G+G  I  + +   L  +L 
Sbjct: 186 ILPSSVPLLLSVMKVNIGLCLVGVIIGEFIG------ARKGLGYLIIYSSQTFKLTWVLM 239


>gi|227874134|ref|ZP_03992340.1| phosphate ABC superfamily ATP binding cassette transporter, inner
           membrane subunit PstA [Oribacterium sinus F0268]
 gi|227840046|gb|EEJ50470.1| phosphate ABC superfamily ATP binding cassette transporter, inner
           membrane subunit PstA [Oribacterium sinus F0268]
          Length = 660

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 73/478 (15%), Positives = 158/478 (33%), Gaps = 29/478 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           + L +L + ++SL  +  +A       +   +L P+LD++  IP + +    LT     F
Sbjct: 114 SFLALLFSTLLSLGCSIFFAFY--FWEKGRRILYPLLDLLSGIPSVVYGFIGLTVGKPLF 171

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + +         LAA+        + M  S+  S+  +       +R+  LS       L
Sbjct: 172 LKMGVSTGSCILLAAVLLSILIFPF-MVDSITDSMVKLKAKYFLEARALGLSPAYIILRL 230

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI-----PLPGIGSYIALAIKEQDL 238
            +P S+  +    ++         +A  M+V    +          I S IAL +   + 
Sbjct: 231 ILPSSLRSIFMAFLLGSGRALGETMAVMMVVGNANLFPKLLSKGETIASLIALEMGSAEY 290

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
            ++ Y  L   G++ L    L   ++    + R  + T    +   V+            
Sbjct: 291 HSLHYHALYASGLVLLLLVALIHLLVKMRERPRTSKFTSRAASPEPVILESTSHAVDTDT 350

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G +         N  +   R L   +                S++  +  F  +    + 
Sbjct: 351 GTAESPSVHFSENREEVAPRLLITGKRAKASRSFSAVLLFLYSFLSFLLIFSALLFFFLY 410

Query: 359 IAWQSIGYIVNHFTY--------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           I ++    I   F           +   +      ++   +  ++++ +  +   I++ F
Sbjct: 411 IFYKGYKVISPSFLLDTPKGMVLGEEGGIFPAITGSLAFSLTALVLSGLPSLFTAIFMVF 470

Query: 411 RPHISSK---IQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                 K   +  F  LL+  P+ V     + L V  +       +  ++L ++      
Sbjct: 471 YAKEGRKKESLHFFIHLLSGVPSIVLGLFSYSLFVYQLKLGRSVLSGAIALAIMIFPFME 530

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           I    I      P  +   + S   +     R ++LP   P  ++  + A   A  A+
Sbjct: 531 IRMEKIF--EEVPKSYLHSSESLGCSKGYTLRKLVLPYTLPELLSTMLLAFCFALGAT 586


>gi|197658975|emb|CAR47848.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system,
           permease component [Rhodococcus sp. PY11]
          Length = 263

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 98/249 (39%), Gaps = 14/249 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              + ++ +  I     +      ++   +P  L    + Q A+ TT R++ ++ I  + 
Sbjct: 26  AGVLSIVAVWWIAGDATRFLPGVGEVFGSLPTFLSSPLVWQEAALTTWRVVCSLAIGFVL 85

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               A +  +    G V+   + I  ++P        +  F          ++   +F +
Sbjct: 86  GTAAAVVMTRMEFWGRVVGAYVAIATAVPSTILALLALFIFR--------KSDAGVVFVV 137

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             +    +   + + L ++  +L+E++  +R        ++ +P  +P  +  +    + 
Sbjct: 138 AVTTFPFIAVLLREGLRSLSGNLDEMTSVYRFGRASAVRHVVLPQVLPYALTALRNEYAH 197

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
            W  VV +E+ ++        G+G   + A     L  +++ +L  + ++ + + L+ RP
Sbjct: 198 AWKVVVLAELFIINS------GMGWQFSQAFDRFQLQRVMHWLLLFVAILLVTEYLIIRP 251

Query: 263 MIVWSNKFR 271
               + +++
Sbjct: 252 AEQRALRWK 260



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 86/252 (34%), Gaps = 13/252 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                      S   V  ++ ++W        +    +  G +    +   V        
Sbjct: 13  AGSRARVQAALSAAGVLSIVAVWWIAGDATRFLPGVGEVFGSLPTFLSSPLVWQ---EAA 69

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T +RVV  + I  ++     + +         +  +  +  A P+ +    +++   + 
Sbjct: 70  LTTWRVVCSLAIGFVLGTAAAVVMTRMEFWGRVVGAYVAIATAVPSTILA--LLALFIFR 127

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +  +   + +       +L     G  +   +  E+ S +        R+++LP + P
Sbjct: 128 KSDAGVVFVVAVTTFPFIAVLL--REGLRSLSGNLDEMTSVYRFGRASAVRHVVLPQVLP 185

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           Y +T        AW   +++E+       +  +G+G   +++ ++     V+  +L+   
Sbjct: 186 YALTALRNEYAHAWKVVVLAELF------IINSGMGWQFSQAFDRFQLQRVMHWLLLFVA 239

Query: 565 FVLALNRFLWHP 576
            +L     +  P
Sbjct: 240 ILLVTEYLIIRP 251


>gi|170767588|ref|ZP_02902041.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia albertii TW07627]
 gi|170123922|gb|EDS92853.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia albertii TW07627]
          Length = 385

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVV 121
            ++  + +  +++ +L+           S      +  +L+++Q++P     G L   + 
Sbjct: 177 LAQHLILLFGSVLPALVVGVPLGVWCHFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA 236

Query: 122 YFMNLYPGKVIGAELAA-----IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +  +P               + A+    +  +   +   L  IPRD+ E + +  +S 
Sbjct: 237 GLVAAFPWLGTLGIAGTGMTPALIALALYALLPLVRGVVVGLNQIPRDVLESASAMGMSE 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+F  + +P ++P  + ++ + M       V + +I  G       G G+ +   +   
Sbjct: 297 GQRFLCVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
               +L  ++ ++G+  + D L 
Sbjct: 350 ATDLVLLGVIPVIGLAVIIDALF 372



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 21/200 (10%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  +   ++ A ++ +P+G+W  F       I     ++   P+   F L+++ ++   +
Sbjct: 181 LILLFGSVLPALVVGVPLGVWCHFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLA-GLV 239

Query: 447 NPNLWLSLLMIFGT-------------QWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
               WL  L I GT                ++  V+ G +  P D  E AS+  ++  + 
Sbjct: 240 AAFPWLGTLGIAGTGMTPALIALALYALLPLVRGVVVGLNQIPRDVLESASAMGMSEGQR 299

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + LP   P ++             ++V+ +   G       G GA + +     +  
Sbjct: 300 FLCVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAG-------GFGALVFQGLLSSATD 352

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+LGV+ +    + ++   
Sbjct: 353 LVLLGVIPVIGLAVIIDALF 372


>gi|317131249|ref|YP_004090563.1| phosphate ABC transporter, inner membrane subunit PstC
           [Ethanoligenens harbinense YUAN-3]
 gi|315469228|gb|ADU25832.1| phosphate ABC transporter, inner membrane subunit PstC
           [Ethanoligenens harbinense YUAN-3]
          Length = 322

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 73  LSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
             A+ I+  F+   A        +     L P ++I   IP + +    LT  V +  ++
Sbjct: 108 FLALAIATPFSLAAAIFMVQISPKLGKNFLQPAIEIFVGIPSVVYGWTGLTVLVPFIRDI 167

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +  ++  + LA    +       +T     ++ + P+   E S     + WQ    + +P
Sbjct: 168 FHLQIGFSVLAGAIVLAIMIFPTITSISADAIRHTPKMFTEASYGLGSTRWQLITKVILP 227

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----------LPGIGSYIALAIKEQ 236
           +++PG++  +++ ++  +   +A  M++      P             I   +  A +  
Sbjct: 228 YALPGVLTGVILGLARAFGEALAVAMVIGPSNTFPKNILSPTSNLTTVIAGAMGNAAQGG 287

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +L + L++M  +L VI     ++ R +
Sbjct: 288 ELQSALWSMALLLLVISFVFIMVVRII 314



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISS-KI 418
           W  I   V +  Y  V   I++   ++    + + IA+   +   I++    P +    +
Sbjct: 79  WSPIDGPVTNGQYGHVGAAIFI-FGSITICFLALAIATPFSLAAAIFMVQISPKLGKNFL 137

Query: 419 QPFAQLLAAFPANV--FFPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWYILFNV-IA 470
           QP  ++    P+ V  +  L V       + +  +  ++    +++    +  + ++   
Sbjct: 138 QPAIEIFVGIPSVVYGWTGLTVLVPFIRDIFHLQIGFSVLAGAIVLAIMIFPTITSISAD 197

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                P  F E +     T W+    +ILP   P  +TG I     A+  ++   +    
Sbjct: 198 AIRHTPKMFTEASYGLGSTRWQLITKVILPYALPGVLTGVILGLARAFGEALAVAMVIGP 257

Query: 531 HIHLRTT 537
                  
Sbjct: 258 SNTFPKN 264


>gi|325284190|ref|YP_004256731.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
 gi|324315999|gb|ADY27114.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
          Length = 246

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 20/216 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILG 114
           + ++L +   +    +   M + LL        A +   R    ++  +  + Q+ P + 
Sbjct: 45  ERNTLWELTWQHLSLIGVTMALVLLIGVGLGVWATRPQGRAFLPLVNNLTTVGQTFPPIA 104

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +               + A+ A+    +  +T S    L  +   + + +R   L
Sbjct: 105 VLFLALPLVG--------FGAVGAVAALTLYALLPVTRSTVLGLQGVEAPVLDAARGLGL 156

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S  Q+ W L VP ++P ++  +  ++         + M+  G       G+G  I   + 
Sbjct: 157 SAAQRLWRLEVPVALPAILSGIRTALVLTVATATLAPMVGTG-------GLGVPIIAGLG 209

Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
             +L  IL   + +  +  L D   + L R +  W+
Sbjct: 210 ADNLALILQGAVPVALLALLGDFTMRTLERRLTPWA 245



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 79/247 (31%), Gaps = 18/247 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            +     FW      +      +    +      ++ L+ +    +++  V + +++  +
Sbjct: 12  AAGWAAFFWLVSAQELWARTLSRLFPGVSTPVYERNTLWELTWQHLSLIGVTMALVL--L 69

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLL----AAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           I + +G+W            P    L      FP      L +  V +  +     L+L 
Sbjct: 70  IGVGLGVW--ATRPQGRAFLPLVNNLTTVGQTFPPIAVLFLALPLVGFGAVGAVAALTLY 127

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +      +  + + G         + A    ++  +    + +P   P  ++G  TA  
Sbjct: 128 ALL----PVTRSTVLGLQGVEAPVLDAARGLGLSAAQRLWRLEVPVALPAILSGIRTALV 183

Query: 516 GAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                + ++ +   G + +    GLGA       +G+ P     V ++        R L 
Sbjct: 184 LTVATATLAPMVGTGGLGVPIIAGLGADNLALILQGAVP-----VALLALLGDFTMRTLE 238

Query: 575 HPLYLYG 581
             L  + 
Sbjct: 239 RRLTPWA 245


>gi|159905953|ref|YP_001549615.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanococcus maripaludis C6]
 gi|159887446|gb|ABX02383.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanococcus maripaludis C6]
          Length = 291

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 14/220 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I   +  NI  L A +  + I  ++L  I  +      V+       +  LP+Y S    
Sbjct: 6   IGESVLENILKLSALLSSMIIFAMVLFLIISSIPVLSFVNPFDFVFGLEWLPKYNSYGIF 65

Query: 71  RMLSA----MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----L 116
            M+       V++L+F+       A        +++  +L P ++I+ +IP + +    +
Sbjct: 66  PMVVGSFLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGM 125

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V    +++      + LAA   +    V  +T     ++ ++P  L+E S +   + 
Sbjct: 126 VLLVPLIRDVFNTNPGYSWLAASIVLGIMIVPTITVLSEDAINSVPPQLKEGSLAMGATR 185

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           WQ    + +P S+ G++  +++ M       +A  M+   
Sbjct: 186 WQTIKSVILPASLSGILSGIILGMGRAIGETMAVLMVAGN 225



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
            ++ ++A +  +P+G+             + + ++P  ++L A P+ V+         PL
Sbjct: 72  FLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGMVLLVPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    +       L  S+++       I        ++ P   KE + +   T W+  + 
Sbjct: 132 IRDVFNTNPGYSWLAASIVLGIMIVPTITVLSEDAINSVPPQLKEGSLAMGATRWQTIKS 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP      ++G I   G A   ++   + +     + T+
Sbjct: 192 VILPASLSGILSGIILGMGRAIGETMAVLMVAGNWPLIPTS 232


>gi|116754016|ref|YP_843134.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanosaeta thermophila PT]
 gi|116665467|gb|ABK14494.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanosaeta thermophila PT]
          Length = 290

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 75/185 (40%), Gaps = 7/185 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA V++ GI +++++          + +          +      T   +L AM++S  
Sbjct: 23  VLAIVILGGIFSVIIYNGIGAISIEFLTEPHRNLGQEGGIVTCIEGTMWLVLGAMLVSAP 82

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                       ++S  L  ++   +  +  +P + +  F + + ++     +    LA 
Sbjct: 83  LGIGAGIYLNEYSRSHTLNRIITISISCLNGVPSVVYGLFGLAFLVSTVGISL----LAG 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L ++P  L E S +   + WQ    + +P ++PG++  +++
Sbjct: 139 SVILGLMNLPTIILTTQEALRSVPNSLREGSVALGATKWQTILRIVIPSALPGILTGLII 198

Query: 199 SMSGG 203
            ++  
Sbjct: 199 GVARA 203



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 6/185 (3%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIV---NHFTYQDVLYVIWLGCITMFRVVVLII 395
           R S +L I     +  V I     +I        H        ++     TM+ V+  ++
Sbjct: 19  RGSAVLAIVILGGIFSVIIYNGIGAISIEFLTEPHRNLGQEGGIVTCIEGTMWLVLGAML 78

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           +++ + I  GI++        ++  I      L   P+ V+    ++ +        L  
Sbjct: 79  VSAPLGIGAGIYLNEYSRSHTLNRIITISISCLNGVPSVVYGLFGLAFLVSTVGISLLAG 138

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S+++       I+        + PN  +E + +   T W+    I++P   P  +TG I 
Sbjct: 139 SVILGLMNLPTIILTTQEALRSVPNSLREGSVALGATKWQTILRIVIPSALPGILTGLII 198

Query: 513 ACGGA 517
               A
Sbjct: 199 GVARA 203


>gi|78044059|ref|YP_359638.1| phosphate ABC transporter permease [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996174|gb|ABB15073.1| phosphate ABC transporter, permease protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 289

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 4/132 (3%)

Query: 94  RRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             L   L  ++D++  IP + +    LT  V     + P +     LAA   +    +  
Sbjct: 98  SWLTGYLRTVVDLLAGIPSVVYGWVGLTIIVPAIRQISPNQNGFGLLAAGIILAIMILPT 157

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +      +L ++PR LEE S +   + WQ  W++ +P + PG++  +++ M+      +A
Sbjct: 158 VLSLAEDALRSVPRSLEEASYALGATRWQTIWHVLLPAAAPGIITGLVLGMARAIGETMA 217

Query: 210 SEMIVVGDTVIP 221
            +M++    + P
Sbjct: 218 VQMVIGNTPLFP 229



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 413 HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPN-----LWLSLLMIFGTQWYIL 465
            ++  ++    LLA  P+ V  +  L +   +   ++PN     L  + +++       +
Sbjct: 99  WLTGYLRTVVDLLAGIPSVVYGWVGLTIIVPAIRQISPNQNGFGLLAAGIILAIMILPTV 158

Query: 466 FNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            ++      + P   +E + +   T W+   +++LP   P  +TG +     A   ++  
Sbjct: 159 LSLAEDALRSVPRSLEEASYALGATRWQTIWHVLLPAAAPGIITGLVLGMARAIGETMAV 218

Query: 525 EVASW 529
           ++   
Sbjct: 219 QMVIG 223


>gi|313902639|ref|ZP_07836038.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
 gi|313467077|gb|EFR62592.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter subterraneus DSM 13965]
          Length = 615

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 88/537 (16%), Positives = 180/537 (33%), Gaps = 70/537 (13%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPIL---- 113
           +L      + L +L A  + +   F+   L    RRL   +VLVPI     S+P L    
Sbjct: 115 ALVTSLGISLLSVLLAGFVGVSLAFLLNRLEFPGRRLLQTLVLVPI-----SLPPLVGVL 169

Query: 114 ---------GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPR 163
                    G +   + + + L         +A + A+ T  ++   +     +L  +  
Sbjct: 170 SFMFLYGESGIVPRALQHLLGLEQVPFALRGIAGVLAVHTFTMYPFFYMTTATALQGLDP 229

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            LEE +RS   +GWQ +  + +P   P LV   ++          A  +  V  T+    
Sbjct: 230 SLEEAARSLGATGWQVWRRVTMPMLTPALVAGSLLVFMQSMASYTAPLLFGVDRTLTMQI 289

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLY------DQLLFRPMIVWSNKFRLERTTG 277
               Y+A    +  + +   ++L+M+ + FL+      D+ ++R +       R E  + 
Sbjct: 290 ----YVARTNGDLAMASAFSSVLSMVSIAFLFFMRWYQDRRVYRSLSKGVAYHRAEVRSP 345

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSP-LSNNVKKLCRTLGVIRFHFPENFLQLCS 336
           +    + VL +      L  +       FS      V+ L     +  +    +  +   
Sbjct: 346 LLRWAAMVLSVLGTVLVLLPVFVLVLVSFSVNARWTVQVLPPEYTLENYAAIFSDPRFWE 405

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
             R S              ++  A+  +   +              G +    ++   + 
Sbjct: 406 PVRTSLETSFLATVAAALFSVAAAYVVLRLPIRGR-----------GLLDAAIMLPWALP 454

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
            +++ I +         I++  QP              PL +  V         W+  L 
Sbjct: 455 GTVVAINL---------IAAFNQPG-------------PLTLGRVLVG----TFWILPLA 488

Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            F     ++F +  A  +      +EVA S   T    +R ++LP + P  + GA+ A  
Sbjct: 489 YFVRLMPLVFRSTAAALAQQDPSLEEVARSLGATWLYSFRRVVLPLMMPGVLGGALLAFV 548

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 + S +         +  +   +       +    VL ++++   +   NR 
Sbjct: 549 EGIGEFVASILLYTPDNVPISVEIFRRMYSFEFGTATAYGVLQIVLILIVLGISNRL 605


>gi|289550795|ref|YP_003471699.1| Phosphate transport system permease protein PstA [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658290|ref|ZP_07911162.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|289180327|gb|ADC87572.1| Phosphate transport system permease protein PstA [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496619|gb|EFU84942.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 306

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 67/188 (35%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  + +  ++   L        P    +    T     +      T   ML+ +  S++
Sbjct: 41  LIGLLFLAALLIDTLIKGVGHLTPSFFTNFSSSTPSQAGIKGALVGTLWLMLTIIPFSII 100

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAE 135
                A      AK       +   +  +  +P + F    +  F   MN+    +  + 
Sbjct: 101 LGVGTAIYLEEYAKKNPFTDFIKVCISNLAGVPSVVFGLLGLTIFVRGMNIQALSLGNSI 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA    +    +  +  +  +++  +P  + E S     + WQ    + +P ++PG++  
Sbjct: 161 LAGALTMTLLILPVIIVAAQEAIRAVPSSVREASYGLGANKWQTIRKVVLPAALPGILTG 220

Query: 196 MMMSMSGG 203
            ++++S  
Sbjct: 221 FILALSRA 228



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 62/187 (33%), Gaps = 12/187 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASII 400
           +  +F   ++    I            +F+          G +  T++ ++ +I  + I+
Sbjct: 42  IGLLFLAALLIDTLIKGVGHLTPSFFTNFSSSTPSQAGIKGALVGTLWLMLTIIPFSIIL 101

Query: 401 WIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYY------HLNPNLW 451
            +   I++      +            LA  P+ VF  L ++            L  ++ 
Sbjct: 102 GVGTAIYLEEYAKKNPFTDFIKVCISNLAGVPSVVFGLLGLTIFVRGMNIQALSLGNSIL 161

Query: 452 LSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L +      ++         A P+  +E +       W+  R ++LP   P  +TG 
Sbjct: 162 AGALTMTLLILPVIIVAAQEAIRAVPSSVREASYGLGANKWQTIRKVVLPAALPGILTGF 221

Query: 511 ITACGGA 517
           I A   A
Sbjct: 222 ILALSRA 228


>gi|323339317|ref|ZP_08079606.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus ruminis ATCC 25644]
 gi|323093270|gb|EFZ35853.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus ruminis ATCC 25644]
          Length = 305

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 74/168 (44%), Gaps = 11/168 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  +++ LF   +A   +       S +    +  +++++  IP + +   
Sbjct: 82  ALPMIVGSFAVTLLAALFATPFAIGTSLYMTELSSSKGRAFMQSVVELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LT  V +  + + G   G  L+  F +F   +  +T     SL  +P+  +  S +   
Sbjct: 142 GLTVVVPFVRSHFGGSGYGI-LSGAFVLFVMVLPTITSMTVDSLKAVPKHYKSASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + WQ  W + +  ++PG++  ++  M+  +   +A +M++   +++P 
Sbjct: 201 TEWQTIWRVILRAALPGIMTAVVFGMARAFGEALAVQMVIGNASLLPT 248



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 15/161 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPL 436
             + ++A++   P  I               + +Q   +LL   P+ V+         P 
Sbjct: 90  FAVTLLAALFATPFAIGTSLYMTELSSSKGRAFMQSVVELLVGIPSVVYGFIGLTVVVPF 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V S          L  + ++       I    +    A P  +K  + +   T W+    
Sbjct: 150 VRSHFGGSGYG-ILSGAFVLFVMVLPTITSMTVDSLKAVPKHYKSASLALGATEWQTIWR 208

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +IL    P  +T  +     A+  ++  ++       L T+
Sbjct: 209 VILRAALPGIMTAVVFGMARAFGEALAVQMVIGNASLLPTS 249


>gi|239981981|ref|ZP_04704505.1| permease membrane component [Streptomyces albus J1074]
          Length = 209

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ +   +      +S   G +       + ++P L  +  
Sbjct: 6   QQLLADAYQHASAVFQCMVVATVIGVLIGVATYRSGWAGNLATLTTSSILTVPSLAMIGL 65

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                  + A+    +  +  +    L  +   L + ++   +S W 
Sbjct: 66  LIPLVGLGV--------APTVIALTLYGLLPIVRNSIVGLRGVDATLVDAAKGIGMSRWA 117

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD- 237
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   I     
Sbjct: 118 RLLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAFASG------PGLGNEIFRGISSLGS 170

Query: 238 ---LLAILYAMLTMLGVIFLYD 256
              L  +L   L ++ +  L+D
Sbjct: 171 ANALNQVLAGTLAVIVLALLFD 192



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A++I + +G+         +        +   P+     L++  V        
Sbjct: 19  VFQCMVVATVIGVLIGVATYRSGWAGNLATLTTSSILTVPSLAMIGLLIPLVGLGVAPTV 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A    ++ W     + LP  +P  +TG
Sbjct: 79  IALTLYGLL----PIVRNSIVGLRGVDATLVDAAKGIGMSRWARLLRVELPLAWPPILTG 134

Query: 510 AITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +     G A  A+  S       I    + LG+         +  +V+ G L +   
Sbjct: 135 IRVSTQMLMGIAAIAAFASGPGLGNEIFRGISSLGS-------ANALNQVLAGTLAVIVL 187

Query: 566 VLALN 570
            L  +
Sbjct: 188 ALLFD 192


>gi|254718433|ref|ZP_05180244.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella sp. 83/13]
 gi|265983398|ref|ZP_06096133.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
 gi|264661990|gb|EEZ32251.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. 83/13]
          Length = 390

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|146280326|ref|YP_001170482.1| hypothetical protein Rsph17025_4332 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558567|gb|ABP73177.1| hypothetical protein Rsph17025_4332 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 224

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L +   +T   +  + V+  +F        A S+R  ++  P+++          +S+P 
Sbjct: 9   LLEATLQTLYMVAVSGVLGTVFGLPLGVFLATSQRGELLSSPLVNKVLGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +  + +  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRALAGTSIGTT-AAIVPLTVAAIPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             + +Q    + +P ++PG+   + +++
Sbjct: 127 GATPFQIIRKVLIPEALPGITLGLTLAL 154



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAA 427
           +  ++     T++ V V  ++ ++  +P+G+++           P ++  +        +
Sbjct: 6   IPLLLEATLQTLYMVAVSGVLGTVFGLPLGVFLATSQRGELLSSPLVNKVLGLVVNATRS 65

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVAS 484
            P  +   + +   +      ++  +  ++        +I   V        +   E A 
Sbjct: 66  VPFIILV-VAIIPFTRALAGTSIGTTAAIVPLTVAAIPFIARLVENAIREVDSGLIEAAR 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +   T ++  R +++P   P    G   A       S +      
Sbjct: 125 AMGATPFQIIRKVLIPEALPGITLGLTLALVSLIGYSAMVGAVGG 169


>gi|86606870|ref|YP_475633.1| quaternary amine ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86555412|gb|ABD00370.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 205

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 16/205 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + Q        + +A+ I+L+     A L  + R L + ++ IL I+ ++P L  +
Sbjct: 7   NPGLVWQLTQEHLAMVATALGIALVLALPLALLVHQVRWLALPVMGILSILYTVPSLALI 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V YF             + + A+       +    Y  L ++   + E ++   ++ 
Sbjct: 67  ILLVPYFGLNAR--------SVVVAMVLYTQVILVRHFYVGLRSVEPAILEAAKGLGMNF 118

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ++W + VP  +P  +  + ++                        G+G+ +   I + 
Sbjct: 119 WQRWWQVQVPLMLPVALAGLRLAAIVAIAIATV-------GAKFGAGGLGTLLFEGIAQA 171

Query: 237 DLLAILYAM-LTMLGVIFLYDQLLF 260
                ++A  L +  +  L +  L+
Sbjct: 172 GRYDKIWAGSLAVGSLALLVNTALW 196



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 12/164 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             ++  +     +L   P+     L+V        +    + + M+  TQ  ++ +   G
Sbjct: 44  RWLALPVMGILSILYTVPSLALIILLVPYFGLNARS----VVVAMVLYTQVILVRHFYVG 99

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +      E A    +  W+ W  + +P + P  + G   A   A   + V      G 
Sbjct: 100 LRSVEPAILEAAKGLGMNFWQRWWQVQVPLMLPVALAGLRLAAIVAIAIATVGAKFGAG- 158

Query: 532 IHLRTTGLGAYIAES-TEKGSFPEVVLGVLIMCCFVLALNRFLW 574
                 GLG  + E   + G + ++  G L +    L +N  LW
Sbjct: 159 ------GLGTLLFEGIAQAGRYDKIWAGSLAVGSLALLVNTALW 196


>gi|255019189|ref|ZP_05291315.1| hypothetical protein LmonF_18151 [Listeria monocytogenes FSL
           F2-515]
          Length = 178

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP L  L   +            
Sbjct: 6   FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGI----- 60

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 61  ---VPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 117

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +  +M         + +I  G     +        L I   D   IL   +    + 
Sbjct: 118 MAGIRTAMVLIIGTATLAALIGAGGLGDLI-------LLGIDRNDNSLILLGAIPAALLA 170

Query: 253 FLYDQLL 259
            L+D LL
Sbjct: 171 ILFDFLL 177



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V + IA +I +P+GI++     ++  I   A +    P+     L++  V    +   +
Sbjct: 6   FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGIVPAII 65

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      IL N   G         E + +  +  W+    + LP   P  + G 
Sbjct: 66  ALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIMAGI 121

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA       + ++ +   G +               ++     ++LG +      +  +
Sbjct: 122 RTAMVLIIGTATLAALIGAGGLGDLIL-------LGIDRNDNSLILLGAIPAALLAILFD 174

Query: 571 RFL 573
             L
Sbjct: 175 FLL 177


>gi|229815536|ref|ZP_04445863.1| hypothetical protein COLINT_02583 [Collinsella intestinalis DSM
           13280]
 gi|229808766|gb|EEP44541.1| hypothetical protein COLINT_02583 [Collinsella intestinalis DSM
           13280]
          Length = 217

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 16/185 (8%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI               A +L   P+     + V  +    +   + L++L I    
Sbjct: 39  VPLGILCSQHAWSERLATGTAGVLRVIPSLAILIICVPYLGVGTVPAVVALTVLAIP--- 95

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             IL N      + P D  E      ++  R W  +  P  FP   +G  TA      ++
Sbjct: 96  -PILINTAVALRSVPADVIEAGVGMGMSPARLWLTVKAPLAFPLAFSGVRTAASEIIASA 154

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++     G       GLG  I           + +G + +    L +NR L        
Sbjct: 155 TLAAYIGAG-------GLGILIYTGLGALRNVLLWIGGISVAVLSLIVNRVL-----AMV 202

Query: 582 TRCLR 586
            R +R
Sbjct: 203 DRRIR 207



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 19/178 (10%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L ++      +      +++ IP L  L   V Y             + A+ A+ 
Sbjct: 39  VPLGILCSQHAWSERLATGTAGVLRVIPSLAILIICVPYLGVG--------TVPAVVALT 90

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  +   +L ++P D+ E      +S  + +  +  P + P     +  +    
Sbjct: 91  VLAIPPILINTAVALRSVPADVIEAGVGMGMSPARLWLTVKAPLAFPLAFSGVRTA---- 146

Query: 204 WFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                ASE+I        I   G+G  I   +     + +    +++  +  + +++L
Sbjct: 147 -----ASEIIASATLAAYIGAGGLGILIYTGLGALRNVLLWIGGISVAVLSLIVNRVL 199


>gi|257898793|ref|ZP_05678446.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|257836705|gb|EEV61779.1| conserved hypothetical protein [Enterococcus faecium Com15]
          Length = 247

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 10/228 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + I W  VV    I          V      D   ++     T+   V+ + IAS++  
Sbjct: 13  FILIIWQIVVLVWKIPAFVLPGPAAVFSALTADAHVLLSHSVTTLNEAVIGLAIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 88/234 (37%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +L+  I    +P        +T D H L  ++  T    +  + I+ + 
Sbjct: 11  MAFILIIWQIVVLVWKIPAFVLPGPAAVFSALTADAHVLLSHSVTTLNEAVIGLAIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                      VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ---ATYCVSGAVVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|227523313|ref|ZP_03953362.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227089504|gb|EEI24816.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 320

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 75/174 (43%), Gaps = 7/174 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +V +LP   +   + +L+A+V +               +R    L P+++++  IP + +
Sbjct: 92  EVGALPMIVTSFCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVY 151

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V    + + G   G  LA    +F   +  +T     S+ ++P      S +
Sbjct: 152 GFIGLSVIVPLIRHAFGGTGFGI-LAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLA 210

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              + WQ  + + +  + PG++  ++  M+  +   +A +M+ +G+  +   G+
Sbjct: 211 LGATRWQTIYKVVLRAATPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
             + ++A+++  P  +G+ +          +  +QP  +LL   P+ V+  + +S +   
Sbjct: 103 FCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVYGFIGLSVIVPL 162

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +      +    +++F      + ++ I    + P  ++  + +   T W+    +
Sbjct: 163 IRHAFGGTGFGILAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLALGATRWQTIYKV 222

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +L    P  +T  I     A+  ++  ++   G+  L   GL
Sbjct: 223 VLRAATPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263


>gi|146312371|ref|YP_001177445.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145319247|gb|ABP61394.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
          Length = 385

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 74/200 (37%), Gaps = 15/200 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +   ++ +LL          +       +  +L+++Q+IP +      +    
Sbjct: 177 LVQHLTILFGTLIPALLIGVPIGMWCYRHPTRQGPIFAVLNVIQTIPSVALFGLLIAPLA 236

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       + L         A+ A+    +  +   +   L  +  D+ E + +  +S 
Sbjct: 237 GLVKSFPALSSLGIAGTGLTPALIALVLYALLPLARGVLAGLSQVSPDVLESASAMGMSQ 296

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q+FW + +P ++P L+ ++ +         V +  + V   +I   G G+ +   +   
Sbjct: 297 SQRFWKVQLPIALPLLLRSLRV-------VTVQTVGMAVIAALIGAGGFGALVFQGLLSS 349

Query: 237 DLLAILYAMLTMLGVIFLYD 256
            L  +L  ++  + +  + D
Sbjct: 350 ALDLVLLGVIPTIALAVVID 369



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 94/272 (34%), Gaps = 21/272 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L   + +      +   +L       ++L+   + +   +       S+  +  +   
Sbjct: 110 SGLWLWIALCLLGCSDAIRRLTQQPLWRWLLNAQIWILPLLIVFSGELNSLSLLKEYANR 169

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           QDV     +  +T+      +I A +I +P+G+W    P     I     ++   P+   
Sbjct: 170 QDVFDDALVQHLTIL--FGTLIPALLIGVPIGMWCYRHPTRQGPIFAVLNVIQTIPSVAL 227

Query: 434 FPLVVSCVSYYHLNPNLWLS------------LLMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L+++ ++    +     S            + ++      +   V+AG S    D  E
Sbjct: 228 FGLLIAPLAGLVKSFPALSSLGIAGTGLTPALIALVLYALLPLARGVLAGLSQVSPDVLE 287

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            AS+  ++  + +  + LP   P  +             ++++ +   G       G GA
Sbjct: 288 SASAMGMSQSQRFWKVQLPIALPLLLRSLRVVTVQTVGMAVIAALIGAG-------GFGA 340

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            + +     +   V+LGV+      + ++   
Sbjct: 341 LVFQGLLSSALDLVLLGVIPTIALAVVIDAVF 372


>gi|83951601|ref|ZP_00960333.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius nubinhibens ISM]
 gi|83836607|gb|EAP75904.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius nubinhibens ISM]
          Length = 292

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 9/203 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
            L   SL  +   T    L   V       + A     SR + M ++P +   Q++PI+ 
Sbjct: 82  ALSKRSLIWHGWITLSSTLLGFVFGTGLGILLAIGIVHSRTMDMSVMPWVIASQTVPIIA 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                VV   +L    V+   + +++  F    + +   M + L +      +  +++  
Sbjct: 142 IAPMIVVVLASLQVDDVVAKGVISMYLSF----FPVVVGMVKGLRSPGAMQMDQMKTWNA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-----VVGDTVIPLPGIGSYI 229
           S  Q FW L +P S P L  ++ + ++      V +E+       +G  ++     G  I
Sbjct: 198 SRAQTFWALRLPASAPYLFASLKVGIAASLIGAVVAELSLSQDGGLGARMLGGSYYGQTI 257

Query: 230 ALAIKEQDLLAILYAMLTMLGVI 252
            +         +   ++ ++G+I
Sbjct: 258 QIWSALIAAAILAAGLVAIIGLI 280



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 76/201 (37%), Gaps = 5/201 (2%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
                W + G +V          +IW G IT+   ++  +  + + I + I I     + 
Sbjct: 65  VAAELWNTTGAMVQQGRALSKRSLIWHGWITLSSTLLGFVFGTGLGILLAIGIVHSRTMD 124

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + P+       P     P++V  ++   ++  +   ++ ++ + + ++  ++ G  + 
Sbjct: 125 MSVMPWVIASQTVPIIAIAPMIVVVLASLQVDDVVAKGVISMYLSFFPVVVGMVKGLRSP 184

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                +   +++ +  + +  + LP   PY           +   ++V+E++        
Sbjct: 185 GAMQMDQMKTWNASRAQTFWALRLPASAPYLFASLKVGIAASLIGAVVAELSLSQD---- 240

Query: 536 TTGLGAYIAESTEKGSFPEVV 556
             GLGA +   +  G   ++ 
Sbjct: 241 -GGLGARMLGGSYYGQTIQIW 260


>gi|330684710|gb|EGG96408.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis VCU121]
          Length = 309

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +++  ++   L        P    +    T  +  +      T   M++ + IS++
Sbjct: 44  LIGLIVLAALLIDTLIKGAGHLTPSFFTNFSSSTPSMAGVKGALVGTLWLMITIIPISIV 103

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAE 135
                A      A+       +   +  +  +P + F    +  F   M +    +  + 
Sbjct: 104 LGVGTAIYLEEYARKNPFTNFVKVCISNLAGVPSVVFGLLGLTLFVRGMGVESLSLGKSI 163

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA    +    +  +  +  +++  +P+ + E S     + WQ  + + +P ++PG++  
Sbjct: 164 LAGALTMSLLILPVIIVAAQEAIRAVPKSVREASYGLGANKWQTIYKVVLPAALPGILTG 223

Query: 196 MMMSMSGG 203
            ++++S  
Sbjct: 224 FILALSRA 231



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 12/187 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASII 400
           +  I    ++    I  A         +F+          G +  T++ ++ +I I+ ++
Sbjct: 45  IGLIVLAALLIDTLIKGAGHLTPSFFTNFSSSTPSMAGVKGALVGTLWLMITIIPISIVL 104

Query: 401 WIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
            +   I++      +            LA  P+ VF    L +        + +L  S+L
Sbjct: 105 GVGTAIYLEEYARKNPFTNFVKVCISNLAGVPSVVFGLLGLTLFVRGMGVESLSLGKSIL 164

Query: 456 MIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               T   ++  VI         A P   +E +       W+    ++LP   P  +TG 
Sbjct: 165 AGALTMSLLILPVIIVAAQEAIRAVPKSVREASYGLGANKWQTIYKVVLPAALPGILTGF 224

Query: 511 ITACGGA 517
           I A   A
Sbjct: 225 ILALSRA 231


>gi|307719117|ref|YP_003874649.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306532842|gb|ADN02376.1| transporter [Spirochaeta thermophila DSM 6192]
          Length = 252

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 90/225 (40%), Gaps = 14/225 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +    L+  +++++         P ++   V   L       + + TTLR L     
Sbjct: 13  VFVVAGAFLLWKVVSLVAGSPLIVPSPEEVALKVVGILRDPHFLSHVAVTTLRALGGFAC 72

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L        L   S  LG+ L     ++QS+P++  +   +++         +G+ L  
Sbjct: 73  ALAVGVGLGVLGGISGGLGLPLRAAAVVLQSVPVVSVILILLIW---------VGSALTP 123

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            +         +  +  + +   P DL E++R+F LS   +   + +P  +P ++     
Sbjct: 124 FWVGLAMAFPIILITTLEGMEAAPVDLLEMARAFGLSRRVQITRIYIPSLIPFVLAGARS 183

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           ++S  W  V+A+E+I       P  G+G+ +  A    D   +  
Sbjct: 184 ALSLVWKAVIAAEVIA-----FPSSGVGTALYTAKLFIDTPGVFA 223



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L + P      +++  V        + L++         IL   + G  A P D  E+A
Sbjct: 100 VLQSVPVVSVILILLIWVGSALTPFWVGLAM-----AFPIILITTLEGMEAAPVDLLEMA 154

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +F ++       I +P + P+ + GA +A    W A I +EV ++      ++G+G  +
Sbjct: 155 RAFGLSRRVQITRIYIPSLIPFVLAGARSALSLVWKAVIAAEVIAF-----PSSGVGTAL 209

Query: 544 AESTEKGSFPEVVLGV 559
             +      P V    
Sbjct: 210 YTAKLFIDTPGVFAWT 225


>gi|260563278|ref|ZP_05833764.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
 gi|260153294|gb|EEW88386.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
          Length = 263

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 60/180 (33%), Gaps = 9/180 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 64  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 122

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 123 LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 182

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L E +           + + +P + P L
Sbjct: 183 VAVLMIFFPVVST--------FFDGMRCTETGLIEAAEILGAGRMAILFRIRIPSAFPAL 234



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 100 VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 159

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         E A    
Sbjct: 160 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRCTETGLIEAAEILG 215

Query: 488 ITGWRWWRYIILPGIFPYYVT 508
                    I +P  FP   +
Sbjct: 216 AGRMAILFRIRIPSAFPALAS 236


>gi|260567145|ref|ZP_05837615.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261756113|ref|ZP_05999822.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|260156663|gb|EEW91743.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261745866|gb|EEY33792.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 390

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|261408312|ref|YP_003244553.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|261284775|gb|ACX66746.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
          Length = 221

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 69/198 (34%), Gaps = 17/198 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTF 118
           + +      +   SA+++  +       L   +R   L  ++  + ++ Q++P L  L  
Sbjct: 15  ILKALQEHLVLSFSAVLLGTVIAVPIGILLVYNRVGWLNSIVFFVANLFQTVPSLALLAI 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +                 AI A+F   +  +  + +    ++ + +   +R    S  Q
Sbjct: 75  LIPLLGIGM--------KPAILALFLYSLMPILRNTFDGFHSVDKGVLNSARGMGYSTAQ 126

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P S+P ++  + ++      +   + +I  G       G+G  I   +     
Sbjct: 127 TIMKIQLPLSLPYIMSGVRITTVYIISWATLASLIGAG-------GLGQLIVSGLGVNKP 179

Query: 239 LAILYAMLTMLGVIFLYD 256
             I    +  + +  + D
Sbjct: 180 EMIFIGGIGAILLALVAD 197



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 9/154 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
              +++ ++I +P+GI + +     ++S +   A L    P+     +++  +       
Sbjct: 27  FSAVLLGTVIAVPIGILLVYNRVGWLNSIVFFVANLFQTVPSLALLAILIPLLGIG---- 82

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L +   +   IL N   G  +        A     +  +    I LP   PY ++
Sbjct: 83  MKPAILALFLYSLMPILRNTFDGFHSVDKGVLNSARGMGYSTAQTIMKIQLPLSLPYIMS 142

Query: 509 GAITAC--GGAWNASIVSEVASWGHIHLRTTGLG 540
           G         +W A++ S + + G   L  +GLG
Sbjct: 143 GVRITTVYIISW-ATLASLIGAGGLGQLIVSGLG 175


>gi|171911088|ref|ZP_02926558.1| phosphate ABC transporter, inner membrane subunit PstC
           [Verrucomicrobium spinosum DSM 4136]
          Length = 643

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 41/220 (18%)

Query: 77  VISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYP 128
           +I+L+     +  AA       S R   ++ P ++ +Q+IP  +LGF+  +VV  +    
Sbjct: 411 IIALVIALPLSVAAAIYTNQFASPREQELIKPFIEFIQAIPSVVLGFIGISVVGDLIKET 470

Query: 129 GKVIGAELAAIFAI------------FTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLS 175
             V   +    F +                     FS+   ++ N+PR   E S +   +
Sbjct: 471 SNVAWLQWIPGFPVQERLNMFNAGLLLALMAIPTMFSLAEDAIQNVPRAFSEASEALGAT 530

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV--VGDTVIPLP----GIGSY- 228
             Q  + +  P S+ G+   M++ +      ++   M+V  V    I +P    GIG+  
Sbjct: 531 KLQTVFRVIFPASLSGVFAAMLLGLG----RIIGETMVVLLVAGNRIAIPDFSDGIGTVF 586

Query: 229 ---------IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                    IA  + E    +  +  L M+G++     L 
Sbjct: 587 QPAHTLTGIIAQELGEVSKGSSHWQALFMVGILLFTISLF 626



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 35/249 (14%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +  +R   P++      +  +       W   +  V    A+   G  + + ++QD   V
Sbjct: 342 INEVRKQLPKHLSHAEESPALMKAWQ--WDKPIPMVQALTAFLFGGDWITNSSWQDFYGV 399

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV- 432
           + L   ++    ++ IIA +I +P+ +           P     I+PF + + A P+ V 
Sbjct: 400 VPLLTGSL----MIAIIALVIALPLSVAAAIYTNQFASPREQELIKPFIEFIQAIPSVVL 455

Query: 433 -FFPLVVSCVSYYHLNPNLWL-----------------SLLMIFGTQWYILFNVI-AGAS 473
            F  + V        +   WL                  LL+        +F++      
Sbjct: 456 GFIGISVVGDLIKETSNVAWLQWIPGFPVQERLNMFNAGLLLALMAI-PTMFSLAEDAIQ 514

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  F E + +   T  +    +I P          +   G     ++V  + +   I 
Sbjct: 515 NVPRAFSEASEALGATKLQTVFRVIFPASLSGVFAAMLLGLGRIIGETMVVLLVAGNRIA 574

Query: 534 LR--TTGLG 540
           +   + G+G
Sbjct: 575 IPDFSDGIG 583


>gi|161618205|ref|YP_001592092.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|161335016|gb|ABX61321.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
          Length = 386

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAESLGIRGIG 255

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAESLGIRGIG 255

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373


>gi|70727655|ref|YP_254571.1| glycine-betaine binding permease [Staphylococcus haemolyticus
           JCSC1435]
 gi|68448381|dbj|BAE05965.1| glycine-betaine binding permease protein [Staphylococcus
           haemolyticus JCSC1435]
          Length = 195

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            ++      T   +L + +IS++       L +KS  +  ++ P+LD+MQ++P   +L  
Sbjct: 86  QNMWDDLMSTITLVLISSLISIIIGVPLGILMSKSDTVEKIVKPLLDLMQTMPGFLYLIP 145

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            V +F     G V G   + IFA     +          + +I ++L E S SF  +
Sbjct: 146 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRSISKELVETSDSFGST 194



 Score = 43.8 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 4/87 (4%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+GI +     +   ++P   L+   P  ++    V+      +       +      
Sbjct: 110 GVPLGILMSKSDTVEKIVKPLLDLMQTMPGFLYLIPAVAFFGIGMVPGVFASVIF----A 165

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFH 487
               +     G  +   +  E + SF 
Sbjct: 166 LPPTVRMTNLGIRSISKELVETSDSFG 192


>gi|27375200|ref|NP_766729.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27348336|dbj|BAC45354.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 272

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 94/273 (34%), Gaps = 27/273 (9%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-------------QD 375
                + ++   ++    F   V+   A  +AW+ +  I     Y             +D
Sbjct: 2   SAQPSVTASPSGAHRAVRFVLPVIVLAAGLLAWELVVRIREIPPYVLPAPSVIFLTLIKD 61

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +      T+   +   + AS+  I + +       +   + P+A +L   P     P
Sbjct: 62  WAVLSQSLATTLLTTLEGFVAASVGGIALALLFNQSKWVEYSLFPYAVVLQVTPVIAIAP 121

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++      +L     + +       + +L N   G ++   +   +   +  +  +  R
Sbjct: 122 LLLI-----YLEQQTAVVVCAFIVAFFPVLSNTTLGLNSVDRNLAGLFQLYGASPPQTLR 176

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           ++ LP   PY + G   A G +   ++V+E+A+              IAES  + + P +
Sbjct: 177 FLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGTAGAGSGLA--YRIAESGYRLNIPRM 234

Query: 556 VLGV-------LIMCCFVLALNRFLWHPLYLYG 581
              +       +++   +  ++  +    +   
Sbjct: 235 FAALLLLSLAGIVIYGVLALVSHLVLRRWHESA 267



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 13/195 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLS 74
            F L   VL  G++   L        P  +     I L    D   L Q  + T L  L 
Sbjct: 19  RFVLPVIVLAAGLLAWELVVRIREIPPYVLPAPSVIFLTLIKDWAVLSQSLATTLLTTLE 78

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V + +     A L  +S+ +   L P   ++Q  P++      ++Y            
Sbjct: 79  GFVAASVGGIALALLFNQSKWVEYSLFPYAVVLQVTPVIAIAPLLLIYLEQ--------- 129

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           + A +   F    + +  +    L ++ R+L  + + +  S  Q   +L +P ++P ++ 
Sbjct: 130 QTAVVVCAFIVAFFPVLSNTTLGLNSVDRNLAGLFQLYGASPPQTLRFLKLPAALPYILG 189

Query: 195 NMMMSMSGGWFFVVA 209
            + ++        V 
Sbjct: 190 GLRIAGGLSLIGAVV 204


>gi|134102844|ref|YP_001108505.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915467|emb|CAM05580.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 224

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                   + R  + +V   + M+++P LG +T  V+ F       + G  + A+ AI +
Sbjct: 45  PLGVYIGHTGRGAVFVVGASNAMRALPTLGVVTLLVLSFGLGEAPALAGLVILAVPAIVS 104

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                     Y  + N P D  + +R   ++ WQ+ W + +P ++P L   +  +M
Sbjct: 105 --------GTYAGITNAPPDAVDAARGMGMTSWQRLWQVELPNALPLLFGGVRSAM 152



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 4/153 (2%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           + + ++ +   +     ++    + ++  VV + +A+++ +P+G++IG     +  +   
Sbjct: 4   ELVAWLTDPANWTGQGGILVQTLLHLYYCVVSVAVAALVGVPLGVYIGHTGRGAVFVVGA 63

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           +  + A P      L+V             L +L +      I+    AG +  P D  +
Sbjct: 64  SNAMRALPTLGVVTLLVLSFGLGEAPALAGLVILAVPA----IVSGTYAGITNAPPDAVD 119

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            A    +T W+    + LP   P    G  +A 
Sbjct: 120 AARGMGMTSWQRLWQVELPNALPLLFGGVRSAM 152


>gi|302544839|ref|ZP_07297181.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462457|gb|EFL25550.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 228

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 11/172 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +  ++A++I +PVG+ IG     +      +    A P      LV        L+   
Sbjct: 39  ALATLVAALIALPVGLLIGHTGRGAFLAINLSGFGRALPTVG---LVTLVFLASGLSMWP 95

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I+ N  AG +A   + ++ A    +   +    + LP   P  +TG 
Sbjct: 96  VYVSLVAL-AVPVIVTNTYAGMAAVDPEVRDAARGQGMRWHQVLFQVELPLALPLIMTGL 154

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             AC      + ++   S+G       GLG Y+ +   +    +V+ G +++
Sbjct: 155 RLACTQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQVLGGAVLV 199



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 68/191 (35%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +             A +++ L       L   + R   + + +    +++P +G +T
Sbjct: 24  PDGIATRLLEHLQYSALATLVAALIALPVGLLIGHTGRGAFLAINLSGFGRALPTVGLVT 83

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +          +     A+  I T        + Y  +  +  ++ + +R   +   
Sbjct: 84  LVFLASGLSMWPVYVSLVALAVPVIVT--------NTYAGMAAVDPEVRDAARGQGMRWH 135

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P ++P ++  + ++ +        +  +  G       G+G Y+   + ++D
Sbjct: 136 QVLFQVELPLALPLIMTGLRLACTQVVATATIAAYVSFG-------GLGRYVFDGLAQRD 188

Query: 238 LLAILYAMLTM 248
           L+ +L   + +
Sbjct: 189 LVQVLGGAVLV 199


>gi|311112853|ref|YP_003984075.1| glycine betaine/choline ABC transporter membrane protein [Rothia
           dentocariosa ATCC 17931]
 gi|310944347|gb|ADP40641.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Rothia dentocariosa ATCC
           17931]
          Length = 248

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 78/212 (36%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++  ++ +   +Q    ++      +   +  + IA +I +P+G+W G        +  F
Sbjct: 6   RTFAFLGDGVNWQGSQGILARTVEHLGITMFAVAIALVIAVPLGLWAGHTRRGGHALLGF 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A PA     L+        + P      +++      +L + +   +    D  +
Sbjct: 66  TAALRALPALGLLTLLALWFGVNAIPP----LAVLVIIAVAPLLAHTLEAVTGIDPDVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P ++ G  +A       + ++   +  +       LG 
Sbjct: 122 AARAQGMTEGQILCRVEIPLGLPVFMGGLRSAVLQVIATATIAAYINGNN-------LGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +      +P +++  L++      ++  +
Sbjct: 175 YLFDGLAVRDYPRMLVATLLVAVLAFVVDAIM 206



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +           + A+ I+L+        A  +RR G  L+     ++++P LG LT 
Sbjct: 21  QGILARTVEHLGITMFAVAIALVIAVPLGLWAGHTRRGGHALLGFTAALRALPALGLLTL 80

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F       +          +    V  +     +++  I  D+ + +R+  ++  Q
Sbjct: 81  LALWFGVNAIPPLA--------VLVIIAVAPLLAHTLEAVTGIDPDVVDAARAQGMTEGQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P  +P  +  +  ++         +  I   +       +G Y+   +  +D 
Sbjct: 133 ILCRVEIPLGLPVFMGGLRSAVLQVIATATIAAYINGNN-------LGRYLFDGLAVRDY 185

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L A L +  + F+ D ++
Sbjct: 186 PRMLVATLLVAVLAFVVDAIM 206


>gi|224476520|ref|YP_002634126.1| putative ABC transporter permease [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421127|emb|CAL27941.1| putative ABC transporter permease protein [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 308

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 95/240 (39%), Gaps = 21/240 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDI 106
           P +             TL++     I+ +F       AA       S+R+  ++ PIL+I
Sbjct: 72  PFSSTPKYGIWALILGTLKV---TFIATIFAVPVGLGAAIYLSEYASKRMRSIIKPILEI 128

Query: 107 MQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  IP + F    LTF      +L+P       ++    +    +  +T     ++ ++P
Sbjct: 129 LAGIPTIVFGFFALTFVTPMLRHLFPDLGSFNSISPGLVVGVMIIPLITSMSEDAMASVP 188

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVI 220
             + E +     + ++    + +P ++ G+V ++++++S   G   +V+       D+  
Sbjct: 189 NKIREGALGLGATKFEVSLKVVLPAAISGIVASIVLAISRAIGETMIVSLAAGSTPDSSF 248

Query: 221 PLPG-----IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            L G      G  + +A  +    + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 249 SLTGSIQTMTGYIVQVATGDATFGSDIYYSIYAVGFTLFLFTLVMNLISQWISKRFREEY 308



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 24/230 (10%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPAN 431
           Y IW   +   +V     IA+I  +PVG+             + S I+P  ++LA  P  
Sbjct: 79  YGIWALILGTLKVTF---IATIFAVPVGLGAAIYLSEYASKRMRSIIKPILEILAGIPTI 135

Query: 432 VF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           VF         P++           ++   L++       I        ++ PN  +E A
Sbjct: 136 VFGFFALTFVTPMLRHLFPDLGSFNSISPGLVVGVMIIPLITSMSEDAMASVPNKIREGA 195

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN--ASIVSEVASWGHIHLRTTG--- 538
                T +     ++LP      V   + A   A      +     S        TG   
Sbjct: 196 LGLGATKFEVSLKVVLPAAISGIVASIVLAISRAIGETMIVSLAAGSTPDSSFSLTGSIQ 255

Query: 539 --LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              G  +  +T   +F   +   +    F L L   + + +  + ++  R
Sbjct: 256 TMTGYIVQVATGDATFGSDIYYSIYAVGFTLFLFTLVMNLISQWISKRFR 305


>gi|296453681|ref|YP_003660824.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183112|gb|ADG99993.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 335

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K      + A + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRKAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 211 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 271 LKDADWYPLTIGLNQWKDQASTAG 294



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 123 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFVVIIGAISVPGIALAVPQFL 182

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 183 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 238

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 239 QISLPLLAPGIVTTALFTIVATWN 262


>gi|300782368|ref|YP_003762659.1| proline/glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299791882|gb|ADJ42257.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 236

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D   +P          L A+ I+ + T   A   A  RR   +    ++I ++IP  G 
Sbjct: 20  TDKAGVPYRTLEHLRFSLLALAIAAVLTIPAALWLAHYRRGAFLASSAVNIGRAIPSFGL 79

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   ++++      ++       + A+    +  +  + Y  +  + ++  + +R     
Sbjct: 80  I---ILFWFLASRWELDTTFWPLLLALVALAMPPLFTNTYAGVVTLEQETIDAARGTGYR 136

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL--AI 233
            WQ    L +P + P ++    +     +  ++A   + +G  V    G+G YI    A+
Sbjct: 137 EWQIMLRLELPLASPVILAGARV----AFLQLIA--TVAIGAIVNDGGGLGRYIVDGFAV 190

Query: 234 KEQDLLAILYAMLTMLGVIFLYD 256
             Q   AI    L  + +  + D
Sbjct: 191 GAQGYGAIFAGGLAAVLLALVCD 213



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 9/202 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++ D   V +     +   ++ + IA+++ IP  +W+      +        +  A P+ 
Sbjct: 18  SWTDKAGVPYRTLEHLRFSLLALAIAAVLTIPAALWLAHYRRGAFLASSAVNIGRAIPSF 77

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITG 490
               L     S + L+   W  LL +       LF N  AG      +  + A       
Sbjct: 78  GLIILFWFLASRWELDTTFWPLLLALVALAMPPLFTNTYAGVVTLEQETIDAARGTGYRE 137

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    + LP   P  + GA  A         +    + G I     GLG YI +    G
Sbjct: 138 WQIMLRLELPLASPVILAGARVA------FLQLIATVAIGAIVNDGGGLGRYIVDGFAVG 191

Query: 551 S--FPEVVLGVLIMCCFVLALN 570
           +  +  +  G L      L  +
Sbjct: 192 AQGYGAIFAGGLAAVLLALVCD 213


>gi|188588009|ref|YP_001921687.1| ABC transporter, permease protein [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498290|gb|ACD51426.1| ABC transporter, permease protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 256

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R V+  I+A ++ I +G+     P     + P        P  V   LV+       
Sbjct: 62  SVYRSVLCYILAIVLAIVLGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWF---- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ F   + IL+  I G  +       ++ + + I+     + I  P I  
Sbjct: 118 --NKDNAPFIVGFAITFPILYEGIVGSLNNIDEKLIDMMNIYEISLIDKIKKIYGPVIKF 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +  ++    A+   I  EV           G+G+ I       +   +   ++I+  
Sbjct: 176 HLASIFVSTFSLAFKVVIAGEV-----HGQPKYGIGSAIQLEKVNFNTSGIFAWIVIIVI 230

Query: 565 FVLAL---NRFLWHPLYLY 580
             LA    N      +Y +
Sbjct: 231 LSLAFEFINNLFKARIYRW 249



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F+ V  ++ ++++        + ++  +   +           +  R +   +++++
Sbjct: 16  CLFFLTVWQVLAVIINNDIYLPNIQQVITEMIKIISRKDFNLILISSVYRSVLCYILAIV 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   L         +L PI    ++IP +  +   +V+F       ++G        
Sbjct: 76  LAIVLGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWFNKDNAPFIVG-------- 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +   +  SL NI   L ++   + +S   K   +  P     L    + + S
Sbjct: 128 -FAITFPILYEGIVGSLNNIDEKLIDMMNIYEISLIDKIKKIYGPVIKFHLASIFVSTFS 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  V+A E+        P  GIGS I L     +   I   ++ ++ +   ++ +
Sbjct: 187 LAFKVVIAGEV-----HGQPKYGIGSAIQLEKVNFNTSGIFAWIVIIVILSLAFEFI 238


>gi|326383730|ref|ZP_08205415.1| ABC transporter permease [Gordonia neofelifaecis NRRL B-59395]
 gi|326197494|gb|EGD54683.1| ABC transporter permease [Gordonia neofelifaecis NRRL B-59395]
          Length = 150

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 17/163 (10%)

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P L +    V++       KV    LAA+     +    +  +           L E +
Sbjct: 1   MPPLAYFFLLVIWLGIDEAPKVTLLALAAMPPAAVATASAVAATPVA--------LVEAA 52

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R+   + +     + +P ++P     + +S+   +  VVA+E+         +PG+G  +
Sbjct: 53  RAIGATRFGVVRDVVLPSALPETFTGIRLSVGIAYSSVVAAELF------NGVPGVGGMV 106

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269
             A    +   +L  ++ +     + D   + + R  + W  K
Sbjct: 107 KDASNYNNTPVVLVGIIAIGLSGLIIDVALRAVERRAVPWRGK 149



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P   +F L+V  +          L+L  +          V A   A      E A +  
Sbjct: 1   MPPLAYFFLLVIWLGIDEAPKVTLLALAAMPPAAVATASAVAATPVA----LVEAARAIG 56

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T +   R ++LP   P   TG   + G A+++ + +E+ +         G+G  + +++
Sbjct: 57  ATRFGVVRDVVLPSALPETFTGIRLSVGIAYSSVVAAELFNG------VPGVGGMVKDAS 110

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573
              + P V++G++ +    L ++  L
Sbjct: 111 NYNNTPVVLVGIIAIGLSGLIIDVAL 136


>gi|311693884|gb|ADP96757.1| binding-protein-dependent transport systems inner membrane
           component [marine bacterium HP15]
          Length = 384

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 15/229 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ +I      I        +  +           Q           A+ IS    F+
Sbjct: 136 LMILAVIVGSWLWILRGGGLESLSLVREFNARPDKFEQALWTHLALAFGAVGISAGLAFL 195

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV-------YFMNLYPGKVIGAELA- 137
            A    +S      ++  +  +Q+IP L      +         F  L    + G   A 
Sbjct: 196 LALKMIRSVAWRRPILGAVSFLQTIPSLAVFGLLIAPLSALAAAFPALQAMGIRGIGWAP 255

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+ A+    +  M  + + +L  +P  L +  R   ++  Q F+ L +P ++P +V  + 
Sbjct: 256 ALLALVAYSLLPMVRNTFVALTEVPESLADAGRGMGMNERQLFFKLKLPLALPVIVEGVR 315

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           ++        + +  +     +I   G GS+I   + +  +  +L   L
Sbjct: 316 IT-------TIQAIGLTAVAALIGAGGFGSFIFQGLGQAAMDLVLLGAL 357



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 73/240 (30%), Gaps = 21/240 (8%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L S + +  M+          +  G   +S+  +       D         + +    V
Sbjct: 127 RLGSGRGLQLMILAVIVGSWLWILRGGGLESLSLVREFNARPDKFEQALWTHLALAFGAV 186

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW- 451
              I++ +   + + +         I      L   P+   F L+++ +S          
Sbjct: 187 G--ISAGLAFLLALKMIRSVAWRRPILGAVSFLQTIPSLAVFGLLIAPLSALAAAFPALQ 244

Query: 452 -----------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                        L ++  +   ++ N     +  P    +      +   + +  + LP
Sbjct: 245 AMGIRGIGWAPALLALVAYSLLPMVRNTFVALTEVPESLADAGRGMGMNERQLFFKLKLP 304

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P  V G       A   + V+ +   G       G G++I +   + +   V+LG L
Sbjct: 305 LALPVIVEGVRITTIQAIGLTAVAALIGAG-------GFGSFIFQGLGQAAMDLVLLGAL 357


>gi|332967759|gb|EGK06865.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Desmospora sp. 8437]
          Length = 227

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 74/210 (35%), Gaps = 15/210 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +     R  L     ++ + +       L A+  RL   ++ + +I+Q++P L  L
Sbjct: 17  NAGYVWDQFYRHFLMSAYGVLFAAIVAIPVGILIARYHRLSGWVLSLANIIQTVPALAML 76

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++                 + A+F   +  +  + Y  + N+   L E   +  ++ 
Sbjct: 77  AILMLVMGLG--------ANTVVVALFLYSLLPIIKNTYTGIRNVDNTLLESGEAMGMTK 128

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q    + +P S+  ++  +  ++      V+A  +  VG  +         +       
Sbjct: 129 FQILRMVELPLSLSVIMAGLRTAL------VIAIGIATVGTFIGGGGLGSIIV-RGTNAT 181

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           D   I+ A      ++ +   L+   +  W
Sbjct: 182 DGTVIILAGAIPTALMAVVADLVMGWLERW 211



 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 4/137 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              ++ A+I+ IPVGI I     +S  +   A ++   PA     +++  +         
Sbjct: 33  AYGVLFAAIVAIPVGILIARYHRLSGWVLSLANIIQTVPALAMLAILMLVMGLGANT--- 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   +   I+ N   G     N   E   +  +T ++  R + LP      + G 
Sbjct: 90  -VVVALFLYSLLPIIKNTYTGIRNVDNTLLESGEAMGMTKFQILRMVELPLSLSVIMAGL 148

Query: 511 ITACGGAWNASIVSEVA 527
            TA   A   + V    
Sbjct: 149 RTALVIAIGIATVGTFI 165


>gi|329938097|ref|ZP_08287548.1| permease membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329302586|gb|EGG46476.1| permease membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 215

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A +    +   MV + L   +   +  +S   G +       + +IP L  +   
Sbjct: 13  QLLADALQHASAVFQCMVAATLIGVLIGVVTYRSEWAGNLATLSTSTILTIPSLAMIGLL 72

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +       P          + A+    +  +  +    L  +   L + ++   +S   +
Sbjct: 73  IPVLGLGVPP--------TVTALTLYGLLPIVRNSIVGLRGVDPALVDAAKGIGMSRPAR 124

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + +S +     + A      G      PG+G+ I   I      
Sbjct: 125 LLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAFASG------PGLGNEIFRGIASLGSK 177

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             L  +L     I +   L 
Sbjct: 178 NALNQVLAGTLGIIVLALLF 197



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++ A++I + +G+         +        +   P+     L++  +        
Sbjct: 25  VFQCMVAATLIGVLIGVVTYRSEWAGNLATLSTSTILTIPSLAMIGLLIPVLGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L+L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 85  TALTLYGLL----PIVRNSIVGLRGVDPALVDAAKGIGMSRPARLLRVELPLAWPPILTG 140

Query: 510 AITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +     G A  A+  S       I      LG+       K +  +V+ G L +   
Sbjct: 141 IRVSTQMLMGIAAIAAFASGPGLGNEIFRGIASLGS-------KNALNQVLAGTLGIIVL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|314969540|gb|EFT13638.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA1]
          Length = 238

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 78/211 (36%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + IA+I  IP G+ IG      +      
Sbjct: 14  ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKTIAVACF 73

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 74  GAFRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAIDDEVADG 133

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 134 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 186

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 187 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 67/224 (29%), Gaps = 17/224 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ I+ +           + R   
Sbjct: 8   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT 67

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMY 155
           + V      ++         ++     L     IG E   +     +    +  +    Y
Sbjct: 68  IAVACFGAFRA-------LPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSY 120

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +
Sbjct: 121 SGVDAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGM 180

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G       G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 181 G-------GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217


>gi|256254293|ref|ZP_05459829.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti B1/94]
          Length = 403

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRT-TGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G           + ++ +   G   +    G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|239636067|ref|ZP_04677081.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus warneri L37603]
 gi|239598338|gb|EEQ80821.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus warneri L37603]
 gi|330685211|gb|EGG96874.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU121]
          Length = 229

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 80/207 (38%), Gaps = 15/207 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +       + A+ ++L   ++ I +I+Q++P + 
Sbjct: 14  SLNFGYLMELFFKHLLMSVYGVLFACIIGIPIGIVIARYKKLAWPIITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  + ++  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVDVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TRNQVLRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
             D    + A    + +I +   L  R
Sbjct: 179 STDGTTFILAGAIPIALIAILIDLGLR 205



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  Y++ L    +   V  ++ A II IP+GI I     ++  I   A ++   PA    
Sbjct: 16  NFGYLMELFFKHLLMSVYGVLFACIIGIPIGIVIARYKKLAWPIITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          + + +   +   I+ N   G      + K+      +T  +  
Sbjct: 76  AILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVDVDENIKDAGKGMGMTRNQVL 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|227511127|ref|ZP_03941176.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227085609|gb|EEI20921.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 320

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 75/174 (43%), Gaps = 7/174 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +V +LP   +   + +L+A+V +               +R    L P+++++  IP + +
Sbjct: 92  EVGALPMIVTSFCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVY 151

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L+  V    + + G   G  LA    +F   +  +T     S+ ++P      S +
Sbjct: 152 GFIGLSVIVPLIRHAFGGTGFGI-LAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLA 210

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
              + WQ  + + +  + PG++  ++  M+  +   +A +M+ +G+  +   G+
Sbjct: 211 LGATRWQTIYKVVLRAATPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
             + ++A+++  P  +G+ +          +  +QP  +LL   P+ V+  + +S +   
Sbjct: 103 FCVTVLAALVATPFALGVALFMTEISPKRGTKFLQPVIELLVGIPSVVYGFIGLSVIVPL 162

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +      +    +++F      + ++ I    + P  ++  + +   T W+    +
Sbjct: 163 IRHAFGGTGFGILAGTIVLFVMVLPTITSLSIDSIRSVPMYYRSASLALGATRWQTIYKV 222

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +L    P  +T  I     A+  ++  ++   G+  L   GL
Sbjct: 223 VLRAATPGILTAIIFGMARAFGEALAVQMV-IGNATLMPHGL 263


>gi|256060356|ref|ZP_05450529.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella neotomae 5K33]
          Length = 403

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+++IP     G L   + +F   +P     G     
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVRTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 213 GIPLGLICHRLPRLRASVLNSLNIVRTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 272

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 273 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 332

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 333 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 390


>gi|159900512|ref|YP_001546759.1| phosphate ABC transporter inner membrane subunit PstA
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893551|gb|ABX06631.1| phosphate ABC transporter, inner membrane subunit PstA
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 416

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 71/172 (41%), Gaps = 22/172 (12%)

Query: 51  IVPITLDVHSLPQYASRT-TLRMLSAMVISLLFTFVYATLAA-------KSRRLGMVLVP 102
             P++ D     +   RT  L  L  + I++LF F     AA          R   ++  
Sbjct: 170 TTPMSSDP---LRAGVRTALLGSLWMIAITILFAFPIGVGAAIYLEEYATDNRFNRIIQT 226

Query: 103 ILDIMQSIPILGFLTFTVVYFM----NLYPGKVIGAE-------LAAIFAIFTSQVWNMT 151
            ++ +  +P + +    +V F+     L  G++ GA+       +AA   +    +  M 
Sbjct: 227 NINNLAGVPSIIYGMLGLVIFVRTLEPLTSGRIFGADSGNGRTIVAASLTMMLLILPIMI 286

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  +++  +P  L + S     + WQ  W+  +P ++PG+    ++++S  
Sbjct: 287 INGQEAIRAVPLSLRQASYGLGATKWQTIWHHVLPNALPGIFTGTILAVSRA 338



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 19/177 (10%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWI---GFRPHIS 415
           +W + G++    +   +   +    + +++ + + I+ A  I +   I++         +
Sbjct: 162 SWLTAGFLTTPMSSDPLRAGVRTALLGSLWMIAITILFAFPIGVGAAIYLEEYATDNRFN 221

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSY---------------YHLNPNLWLSLLMIFGT 460
             IQ     LA  P+ ++  L +                     +    +  SL M+   
Sbjct: 222 RIIQTNINNLAGVPSIIYGMLGLVIFVRTLEPLTSGRIFGADSGNGRTIVAASLTMMLLI 281

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
              ++ N      A P   ++ +     T W+   + +LP   P   TG I A   A
Sbjct: 282 LPIMIINGQEAIRAVPLSLRQASYGLGATKWQTIWHHVLPNALPGIFTGTILAVSRA 338


>gi|326389912|ref|ZP_08211475.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
 gi|325993972|gb|EGD52401.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
          Length = 217

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   ++ + +I+ +F      L           +  L  +L  I++
Sbjct: 1   MSETINLLLVGTWQTIYMVVVSTLIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F  L  GK IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRLLVGKAIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E ++S   S +Q    + +P ++P +   + ++
Sbjct: 119 IEAAQSMGASPFQIITKVLIPEALPSIAAGVTIT 152



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV  +IA+I  +P+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVVSTLIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  ++  +   I F                 E A S   + ++  
Sbjct: 74  LIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGVIEAAQSMGASPFQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TKVLIPEALPSIAAGVTIT 152


>gi|70726525|ref|YP_253439.1| hypothetical protein SH1524 [Staphylococcus haemolyticus JCSC1435]
 gi|68447249|dbj|BAE04833.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 306

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 58/153 (37%), Gaps = 6/153 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
               +    + T   M+S + IS++     A      AK       +   +  +  +P +
Sbjct: 76  SQAGIKGALAGTIWLMISIIPISIVLGVGTAIYLEEYAKDNFFTSFVKISISNLAGVPSI 135

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV---WNMTFSMYQSLCNIPRDLEEVSR 170
            F    +  F+     + +    + I A  T  +     +  S  +++  +P  + E S 
Sbjct: 136 VFGLLGLTLFVRGGGIQALALGNSVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASY 195

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
               + WQ    + +P ++PG++   ++S+S  
Sbjct: 196 GLGANKWQTIRRVVLPAALPGILTGFILSLSRA 228



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 10/142 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           T++ ++ +I I+ ++ +   I++         +S ++     LA  P+ VF  L ++   
Sbjct: 87  TIWLMISIIPISIVLGVGTAIYLEEYAKDNFFTSFVKISISNLAGVPSIVFGLLGLTLFV 146

Query: 443 YYHL-------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                      N  +  +L M       I+ +      A PN  +E +       W+  R
Sbjct: 147 RGGGIQALALGNSVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIR 206

Query: 496 YIILPGIFPYYVTGAITACGGA 517
            ++LP   P  +TG I +   A
Sbjct: 207 RVVLPAALPGILTGFILSLSRA 228


>gi|116617706|ref|YP_818077.1| ABC-type phosphate transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096553|gb|ABJ61704.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 307

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 88/214 (41%), Gaps = 19/214 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           + L    A V++  F    +        +R   ++ PI++++  IP +  GF+  TVV  
Sbjct: 90  SFLVTFLAAVVATPFAIGTSLFMTEIAQKRGAKIMQPIIELLVGIPSVVYGFIGLTVVVP 149

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+    G      L+    +F   +  +T     +L ++PR   E + +   + WQ  + 
Sbjct: 150 FIRNITGGSGFGILSGTIVLFVMILPTITSMTVDTLKSVPRYYRESALAIGATRWQMIYK 209

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +  + PG++  ++  M+  +   +A +M++                 T +   GIG+ 
Sbjct: 210 VVLRSATPGIMTAIVFGMARAFGEALAVQMVIGNAALMPTGLTTPASTLTSVLTMGIGNT 269

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
           +  +++   L  +   +L M  V  L  + + R 
Sbjct: 270 VMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGRR 303



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 69/216 (31%), Gaps = 33/216 (15%)

Query: 391 VVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVF--------F 434
            ++  +A+++  P    IG             +  +QP  +LL   P+ V+         
Sbjct: 91  FLVTFLAAVVATP--FAIGTSLFMTEIAQKRGAKIMQPIIELLVGIPSVVYGFIGLTVVV 148

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P + +              +L +      I    +    + P  ++E A +   T W+  
Sbjct: 149 PFIRNITGGSGFGILSGTIVLFVMI-LPTITSMTVDTLKSVPRYYRESALAIGATRWQMI 207

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------------GLG 540
             ++L    P  +T  +     A+  ++  ++       + T               G+G
Sbjct: 208 YKVVLRSATPGIMTAIVFGMARAFGEALAVQMVIGNAALMPTGLTTPASTLTSVLTMGIG 267

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             +  S +      + + +L+M      + R +   
Sbjct: 268 NTVMGSLQNDVLWTLAMILLLMSLVFNLIVRAIGRR 303


>gi|73542181|ref|YP_296701.1| binding-protein dependent transport system inner membrane protein
           [Ralstonia eutropha JMP134]
 gi|72119594|gb|AAZ61857.1| Binding-protein-dependent transport systems inner membrane
           component [Ralstonia eutropha JMP134]
          Length = 238

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 71/177 (40%), Gaps = 15/177 (8%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           V   G + +L  G     +  D++           L    +     ++ +M ++L     
Sbjct: 8   VAAWGCLTVLALGGLAAWIGVDVIRQH-----QDRLLYDVADHMRLVVFSMALALATGIP 62

Query: 86  YATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                ++ R  R    L+ I ++  ++P         +  + L    +   E  AI A++
Sbjct: 63  AGIALSRPRMRRWADRLMQIFNVGNTVPS--------LAVLALALAVLGIGERPAILALW 114

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + +  +  + Y+ L N+   L E +R   ++ +Q+   + +P ++P ++  + +S+
Sbjct: 115 LASLLPIVRNTYEGLRNVSPTLLEAARGIGMTPFQRLLRVELPNALPVMLAGIRISL 171



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 13/180 (7%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
            + S  +  +    V  +    AW  +  I  H        +++     M  VV  + +A
Sbjct: 2   SKQSVRVAAWGCLTVLALGGLAAWIGVDVIRQHQD-----RLLYDVADHMRLVVFSMALA 56

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSL 454
               IP GI +  RP +        Q+       P+     L ++ +            L
Sbjct: 57  LATGIPAGIAL-SRPRMRRWADRLMQIFNVGNTVPSLAVLALALAVLGIGER----PAIL 111

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +   +   I+ N   G         E A    +T ++    + LP   P  + G   + 
Sbjct: 112 ALWLASLLPIVRNTYEGLRNVSPTLLEAARGIGMTPFQRLLRVELPNALPVMLAGIRISL 171


>gi|89070242|ref|ZP_01157566.1| ABC polyamine/opine transporter, inner membrane subunit [Oceanicola
           granulosus HTCC2516]
 gi|89044162|gb|EAR50320.1| ABC polyamine/opine transporter, inner membrane subunit [Oceanicola
           granulosus HTCC2516]
          Length = 571

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 18/257 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D+   +          +             I P+  D         RT L  L   V  +
Sbjct: 306 DVWGTIDAFSSDYTAGYFAASADRKLTPDGIQPVDEDQRVYGTLFLRTMLMSLGITVSCI 365

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-----GFLTF---------TVVYFMNL 126
              +  A L A        ++ IL ++     L      +             +V+   +
Sbjct: 366 ALGYPVAWLLANLPLRTANVLMILVLLPFWTSLLVRTSAWKVLLQQQGVINDILVWLGLV 425

Query: 127 YPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  +I  +   I A+    +  M   +Y  +  IP      ++S   + W  FW +
Sbjct: 426 SDSNRLIMINNQFGTIVAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATNWTAFWRV 485

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P S+PG+    ++       + +  E++     V     I  +I+ ++      A+  
Sbjct: 486 YFPQSVPGIGAGSILVFILAIGYYITPEIVGGTKGVFISNRIAYHISTSLNWGLAAALGT 545

Query: 244 AMLTMLGVIF-LYDQLL 259
            +L ++ V++ LYD+++
Sbjct: 546 ILLALVLVLYWLYDRIV 562



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 2/138 (1%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 419 LVWLGLVSDSNRLIMINNQFGTIVAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATN 478

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 479 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTKGVFISNRIAYHISTSLNWG 538

Query: 551 SFPEVVLGVLIMCCFVLA 568
                 LG +++   ++ 
Sbjct: 539 L--AAALGTILLALVLVL 554


>gi|307264785|ref|ZP_07546347.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920043|gb|EFN50255.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 217

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   ++ + +I+ +F      L           +  L  +L  I++
Sbjct: 1   MSETINLLLVGTWQTIYMVVVSTLIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F  L  GK IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRLLVGKAIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E ++S   S +Q    + +P ++P +   + ++
Sbjct: 119 IEAAQSMGASPFQIITKVLIPEALPSIAAGVTIT 152



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV  +IA+I  +P+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVVSTLIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  ++  +   I F                 E A S   + ++  
Sbjct: 74  LIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGVIEAAQSMGASPFQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TKVLIPEALPSIAAGVTIT 152


>gi|77463702|ref|YP_353206.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126462535|ref|YP_001043649.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332558558|ref|ZP_08412880.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|77388120|gb|ABA79305.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126104199|gb|ABN76877.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|332276270|gb|EGJ21585.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 224

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L +   +T   +  + V+   F        A S+R  ++  P+++          +S+P 
Sbjct: 9   LLEATLQTLYMVAVSGVLGTAFGLPLGVFLATSQRGELLSAPLVNKVLGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +  + +  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRALAGTSIGTT-AAIVPLTVAAIPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             + +Q    + +P ++PG+   + +++
Sbjct: 127 GATPFQIIRKVLIPEALPGIALGLTLAL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 52/162 (32%), Gaps = 12/162 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPA 430
           ++     T++ V V  ++ +   +P+G+++           P ++  +        + P 
Sbjct: 9   LLEATLQTLYMVAVSGVLGTAFGLPLGVFLATSQRGELLSAPLVNKVLGLVVNATRSVPF 68

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +   + +   +      ++  +  ++        +I   V        +   E A +  
Sbjct: 69  IILV-VAIIPFTRALAGTSIGTTAAIVPLTVAAIPFIARLVENAIREVDSGLIEAARAMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            T ++  R +++P   P    G   A       S +      
Sbjct: 128 ATPFQIIRKVLIPEALPGIALGLTLALVSLIGYSAMVGAVGG 169


>gi|23465735|ref|NP_696338.1| sugar ABC transporter permease [Bifidobacterium longum NCC2705]
 gi|322690633|ref|YP_004220203.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|23326419|gb|AAN24974.1| probable permease of ABC transporter system for sugars
           [Bifidobacterium longum NCC2705]
 gi|320455489|dbj|BAJ66111.1| ABC transporter permease component [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 336

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 151

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K      + A + P            +   L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 272 LKDADWYPLTIGLNQWKDQASTAG 295



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFVVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 184 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QISLPLLAPGIVTTALFTIVATWN 263


>gi|296130849|ref|YP_003638099.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
 gi|296022664|gb|ADG75900.1| binding-protein-dependent transport systems inner membrane
           component [Cellulomonas flavigena DSM 20109]
          Length = 253

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 86/257 (33%), Gaps = 18/257 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R  P +      ++V   +  +         P              +L  +A  T    +
Sbjct: 4   RALPVVGGAAVLLVVWQAVVAVGDVAPRLL-PSPARVAQQAWAQREALATHAGATLGVTV 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                S++  +V A    +  RL   +VP+L   Q++P+L      V++F      KV+ 
Sbjct: 63  VGFTASVVVAWVLAVTLDRLPRLRAAVVPLLVASQTVPVLVVAPLLVLWFGFGLTPKVLV 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L   F         +   + +           +  +   S WQ+F Y+ +P ++P   
Sbjct: 123 VTLVTFF--------PVALGLVEGFAAAGPGASALLATMGASRWQEFAYVRLPAALPRFF 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + + ++      V +E          + G+G+Y+ +         +L  +     +  
Sbjct: 175 TALRIGVTYAVVGAVVAEYAG------AVQGLGTYMTMQRAAFRTDLVLAGVGVCAALTL 228

Query: 254 LYD---QLLFRPMIVWS 267
                   + R ++ W+
Sbjct: 229 ALYAGTSAVERVVVPWT 245



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 10/230 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            + +L + W  VV    +          V    +     +      T+   VV    + +
Sbjct: 11  GAAVLLVVWQAVVAVGDVAPRLLPSPARVAQQAWAQREALATHAGATLGVTVVGFTASVV 70

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
           +   + + +   P + + + P        P  V  PL+V    +          L++   
Sbjct: 71  VAWVLAVTLDRLPRLRAAVVPLLVASQTVPVLVVAPLLVLWFGFGLTPK----VLVVTLV 126

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           T + +   ++ G +A       + ++   + W+ + Y+ LP   P + T        A  
Sbjct: 127 TFFPVALGLVEGFAAAGPGASALLATMGASRWQEFAYVRLPAALPRFFTALRIGVTYAVV 186

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++V+E A          GLG Y+           V+ GV +     LAL
Sbjct: 187 GAVVAEYAG------AVQGLGTYMTMQRAAFRTDLVLAGVGVCAALTLAL 230


>gi|170691771|ref|ZP_02882935.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
 gi|170143055|gb|EDT11219.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia graminis C4D1M]
          Length = 245

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 15/199 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI----GFRPHISSKIQPFAQLLAAFPANVFF 434
           +++     M  V +   +A ++ +P+GI++    G +  ++  +     +  A P     
Sbjct: 42  IVYQSIAQMTMVAIAGSLAIVVAVPLGIYLSRESGKQARVAQALMQTLNMGQAVPKLALL 101

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L +S +              +   T   I+ N + G  A P    E A+   +T  +  
Sbjct: 102 ALAMSVLGIGR----WPSIFALWVATLLPIVLNTLEGLRAVPRALIEAATGMGMTPAQVL 157

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP        G  TA       ++ +   ++             I    +   F  
Sbjct: 158 WQVELPNALYVIFAGIRTALAI----TVGTAPLAFLVGGGGLG---ELIFTGIDMNDFSM 210

Query: 555 VVLGVLIMCCFVLALNRFL 573
           ++ G +      +  +  +
Sbjct: 211 LLAGAIPTAVLAVLTDVLV 229



 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 56/148 (37%), Gaps = 12/148 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILG 114
             +   +      +  A  ++++            + K  R+   L+  L++ Q++P L 
Sbjct: 40  SDIVYQSIAQMTMVAIAGSLAIVVAVPLGIYLSRESGKQARVAQALMQTLNMGQAVPKLA 99

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +                 +IFA++ + +  +  +  + L  +PR L E +    +
Sbjct: 100 LLALAMSVLGIG--------RWPSIFALWVATLLPIVLNTLEGLRAVPRALIEAATGMGM 151

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           +  Q  W + +P ++  +   +  +++ 
Sbjct: 152 TPAQVLWQVELPNALYVIFAGIRTALAI 179


>gi|297157952|gb|ADI07664.1| ABC transporter permease [Streptomyces bingchenggensis BCW-1]
          Length = 227

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 11/172 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++  ++A++I +P+G+ IG     +      A    A P      LV        L+   
Sbjct: 36  LLATLVATLIALPIGLLIGHTGRGAFLAINLAGFGRALPTVG---LVTLVFLASGLSMWP 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I+ N  AG +A   + K+ A    +   +    I LP   P  +TG 
Sbjct: 93  VYISLVAL-AVPVIVTNTYAGMAAVDPEVKDAARGQGMRAHQVLFQIELPLALPLIMTGL 151

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
             A       + ++   S+G       GLG Y+ +   +    +V+ G +++
Sbjct: 152 RLAAVQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQVLGGAVLV 196



 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +       T   L A +++ L       L   + R   + + +    +++P +G +T
Sbjct: 21  PEGIATRLLEHTQYSLLATLVATLIALPIGLLIGHTGRGAFLAINLAGFGRALPTVGLVT 80

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +          I     A+  I T        + Y  +  +  ++++ +R   +   
Sbjct: 81  LVFLASGLSMWPVYISLVALAVPVIVT--------NTYAGMAAVDPEVKDAARGQGMRAH 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P ++P ++  + ++          +  +  G       G+G Y+   + ++D
Sbjct: 133 QVLFQIELPLALPLIMTGLRLAAVQVVATATIAAYVSFG-------GLGRYVFDGLAQRD 185

Query: 238 LLAILYAMLTM 248
           L+ +L   + +
Sbjct: 186 LVQVLGGAVLV 196


>gi|295706951|ref|YP_003600026.1| putative ABC transporter permease [Bacillus megaterium DSM 319]
 gi|294804610|gb|ADF41676.1| putative ABC transporter, permease protein [Bacillus megaterium DSM
           319]
          Length = 237

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 80/215 (37%), Gaps = 14/215 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  +  +  I L   SL  +   T    +   ++  L   + AT    S RL  +L P
Sbjct: 24  SSPTKVWHLFLIKLADGSLAAHIGFTLFETVLGFILGTLLGILLATALWYSTRLANILDP 83

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L I+ ++P +      +V     +   +    + ++              +Y +   + 
Sbjct: 84  YLVILNAMPKVALGPILIVAIGPGFFSILTMGAIISVIITSIV--------VYTAFKEVD 135

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  ++ +SF  +  + F    +P SMP ++    +++   W  V+  E +V        
Sbjct: 136 PNYIKLLKSFGATKTRCFKEAILPASMPAIISTFKVNVGLSWVGVIVGEFLVSSK----- 190

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
            G+G  I    +  +   +L ++L +     +  Q
Sbjct: 191 -GLGYMIIYGFQVFNFTLVLLSLLLIAIFATIMYQ 224



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
             T+F  V+  I+ +++ I +   + +   +++ + P+  +L A P     P+++  +  
Sbjct: 47  GFTLFETVLGFILGTLLGILLATALWYSTRLANILDPYLVILNAMPKVALGPILIVAIGP 106

Query: 443 -YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            ++ +     +  ++I     Y  F           ++ ++  SF  T  R ++  ILP 
Sbjct: 107 GFFSILTMGAIISVIITSIVVYTAF------KEVDPNYIKLLKSFGATKTRCFKEAILPA 160

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  ++      G +W   IV E        + + GLG  I    +  +F  V+L +L+
Sbjct: 161 SMPAIISTFKVNVGLSWVGVIVGEFL------VSSKGLGYMIIYGFQVFNFTLVLLSLLL 214

Query: 562 MCCFVLAL 569
           +  F   +
Sbjct: 215 IAIFATIM 222


>gi|322690174|ref|YP_004209908.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|320461510|dbj|BAJ72130.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 336

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 151

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K      + A + P            +   L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 272 LKDADWYPLTIGLNQWKDQASTAG 295



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFVVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 184 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QISLPLLAPGIVTTALFTIVATWN 263


>gi|242280929|ref|YP_002993058.1| phosphate ABC transporter inner membrane subunit PstA
           [Desulfovibrio salexigens DSM 2638]
 gi|242123823|gb|ACS81519.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio salexigens DSM 2638]
          Length = 318

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 82/196 (41%), Gaps = 7/196 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              L+I +  +L +G+   +    + +    ++    +      T +    A++I+L + 
Sbjct: 57  GLALLIIVGFVLYYGLPAMSWEF-LTENPRESMTAGGIFPCIVGTIVLSYGALMIALPWG 115

Query: 84  FVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
              A      A S RL  ++   ++ +  +P + F  F +  F+ +    V  + +A + 
Sbjct: 116 IATAIYLNEYATSPRLVRIIRLGINNLAGVPSVVFGLFGLSLFVTVMGMGV--SIMAGVC 173

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +  +  ++L ++P+   E S     + WQ  + + +P ++PG++   ++++
Sbjct: 174 TLGALALPLVIGASEEALRSVPQTYREASLGLGATKWQTIYKVVLPAALPGMLTGAILTL 233

Query: 201 SGGWFFVVASEMIVVG 216
           S       A+ M    
Sbjct: 234 SRA-AGETAAIMFTAA 248



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 14/190 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLII 395
           + +  ++     ++ G  +     ++ +       ++      +      T+      ++
Sbjct: 50  KAAAAVNGLALLIIVGFVLYYGLPAMSWEFLTENPRESMTAGGIFPCIVGTIVLSYGALM 109

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           IA    I   I++      P +   I+     LA  P+ VF    +  +S +     + +
Sbjct: 110 IALPWGIATAIYLNEYATSPRLVRIIRLGINNLAGVPSVVF---GLFGLSLFVTVMGMGV 166

Query: 453 SLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           S++    T   +   ++ GA      + P  ++E +     T W+    ++LP   P  +
Sbjct: 167 SIMAGVCTLGALALPLVIGASEEALRSVPQTYREASLGLGATKWQTIYKVVLPAALPGML 226

Query: 508 TGAITACGGA 517
           TGAI     A
Sbjct: 227 TGAILTLSRA 236


>gi|145596799|ref|YP_001161096.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145306136|gb|ABP56718.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 229

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           T   + A++I++L     A  A   R L   ++ +  ++ +IP L    F   Y      
Sbjct: 36  TSLTVRAVLIAVLIAVPLAVAAYWFRALSGPILAVTGVLYTIPSLALFAFLAPYLGIGVV 95

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +    L A+  I  + +          L  +P ++ E +       W + + + +P +
Sbjct: 96  TVLTVVALYALLVIVRNAL--------AGLTQVPPEVREAAEGMGYGRWGRLFRIELPLA 147

Query: 189 MPGLVWNMMMS 199
           +PG++  + ++
Sbjct: 148 IPGILTGLRLA 158



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA +I +P+ +   +   +S  I     +L   P+   F  +   +    +     +
Sbjct: 42  AVLIAVLIAVPLAVAAYWFRALSGPILAVTGVLYTIPSLALFAFLAPYLGIGVVTVLTVV 101

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L  +      I+ N +AG +  P + +E A       W     I LP   P  +TG   
Sbjct: 102 ALYALLV----IVRNALAGLTQVPPEVREAAEGMGYGRWGRLFRIELPLAIPGILTGLRL 157

Query: 513 A 513
           A
Sbjct: 158 A 158


>gi|46190850|ref|ZP_00121009.2| COG0395: ABC-type sugar transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189439790|ref|YP_001954871.1| MalG-type ABC sugar transport systems permease component
           [Bifidobacterium longum DJO10A]
 gi|312133196|ref|YP_004000535.1| malg-type abc sugar transport systems permease component
           [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482543|ref|ZP_07941558.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428225|gb|ACD98373.1| MalG-type ABC sugar transport systems permease component
           [Bifidobacterium longum DJO10A]
 gi|311772397|gb|ADQ01885.1| MalG-type ABC sugar transport systems permease component
           [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915965|gb|EFV37372.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 335

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                          + A + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRNAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 211 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 271 LKDADWYPLTIGLNQWKDQASTAG 294



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTV 120
           ++   T L ++     + L   +     AK R      V V I+  + S+P +       
Sbjct: 123 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRNAVFVVIIGAI-SVPGIALAVPQF 181

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F  L           A+        + +      S   +P++L E +R    S ++ F
Sbjct: 182 LLFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTF 237

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWF 205
           W + +P   PG+V   + ++   W 
Sbjct: 238 WQISLPLLAPGIVTTALFTIVATWN 262


>gi|257878049|ref|ZP_05657702.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257881166|ref|ZP_05660819.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257889753|ref|ZP_05669406.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257892309|ref|ZP_05671962.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260559099|ref|ZP_05831285.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261207633|ref|ZP_05922318.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289565144|ref|ZP_06445597.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|293563451|ref|ZP_06677900.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1162]
 gi|293568136|ref|ZP_06679472.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1071]
 gi|294619249|ref|ZP_06698724.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1679]
 gi|294623599|ref|ZP_06702439.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium U0317]
 gi|314938062|ref|ZP_07845372.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314941952|ref|ZP_07848813.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314948795|ref|ZP_07852167.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314951813|ref|ZP_07854852.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991781|ref|ZP_07857239.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314995822|ref|ZP_07860909.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|257812277|gb|EEV41035.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257816824|gb|EEV44152.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257826113|gb|EEV52739.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257828688|gb|EEV55295.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260074856|gb|EEW63172.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078016|gb|EEW65722.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289163151|gb|EFD10998.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291589126|gb|EFF20938.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1071]
 gi|291594500|gb|EFF25902.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1679]
 gi|291596982|gb|EFF28193.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium U0317]
 gi|291604712|gb|EFF34197.1| binding-protein-dependent transport systems inner membrane
           component [Enterococcus faecium E1162]
 gi|313589926|gb|EFR68771.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593592|gb|EFR72437.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313596092|gb|EFR74937.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313599204|gb|EFR78049.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313642637|gb|EFS07217.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313644861|gb|EFS09441.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 247

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           F ++    + I W+   +I+            D   ++     T+   V+ ++IAS++  
Sbjct: 13  FILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLSHSVTTLNEAVLGLVIASVLSF 72

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              + + +   +     P   +    P  V  PL+     +      L   +L++  + +
Sbjct: 73  ITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFG----MLPKVILVVLISYF 128

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+ +          +      +      + +R   +P     + +G   A     + ++
Sbjct: 129 PIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVAATYCVSGAV 188

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V E  S         GLG Y+          +V   ++ +    L LN
Sbjct: 189 VGEWLS------AQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF+L+I  I +++  I    +P        +  D   L  ++  T    +  +VI+ + 
Sbjct: 11  MAFILIIWQIVVIVWKIPAFILPGPAAVFSALAADAQVLLSHSVTTLNEAVLGLVIASVL 70

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +F+ A      + L M   P+L I Q +PI+       ++F            L  +  +
Sbjct: 71  SFITALAMDYWKFLEMSFYPLLVISQMLPIMVLGPLLTLWFGFGM--------LPKVILV 122

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                + +  S   +L  + ++     ++      + +    +P  + G    + ++   
Sbjct: 123 VLISYFPIVVSFSDTLRKVSKEQIIFLKTMGADTGKIYRIYKIPAGLSGFFSGLKVA--- 179

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
                      VVG+ +    G+G Y+        +  +  A++ ++ +  L +
Sbjct: 180 ---ATYCVSGAVVGEWLSAQAGLGYYMIRVKNSYQIDKVFAAIICVILLSLLLN 230


>gi|226354830|ref|YP_002784570.1| proline/glycine betaine [Deinococcus deserti VCD115]
 gi|226316820|gb|ACO44816.1| putative proline/glycine betaine ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 393

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 15/192 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV- 121
           Q   +    + SA+ +++         A +  R+    + I + +Q+IP L  L   +V 
Sbjct: 179 QEFGQHLRLVGSALGLAVFLGVPLTLWAVRWERVAAGALGIANAVQTIPSLALLGLLIVP 238

Query: 122 ------YFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                  F  L    V G  +A A+ A+    +  +  +  ++L  +P    + +R   +
Sbjct: 239 LAALSRAFPALREVGVAGIGVAPALTAMTLYALLPVLRNGIEALRGVPPGTVDAARGMGM 298

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q FW + +P ++P  +  +  +          + +I  G       G+G+YI   ++
Sbjct: 299 TPAQTFWRVELPLALPVWLSGVRQAAVMLVGVAAVAALIGAG-------GLGTYIFKGLQ 351

Query: 235 EQDLLAILYAML 246
                 IL   +
Sbjct: 352 SAATDLILLGAV 363



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 73/233 (31%), Gaps = 21/233 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +    W      + +     +   +V   +        +   + +  V   + +A  
Sbjct: 140 VPRLWAWAWVPATALLVLSGQLSTWSVLVEARSEGPRWVQEFGQHLRL--VGSALGLAVF 197

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW-------- 451
           + +P+ +W      +++     A  +   P+     L++  ++                 
Sbjct: 198 LGVPLTLWAVRWERVAAGALGIANAVQTIPSLALLGLLIVPLAALSRAFPALREVGVAGI 257

Query: 452 ----LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                   M       +L N I      P    + A    +T  + +  + LP   P ++
Sbjct: 258 GVAPALTAMTLYALLPVLRNGIEALRGVPPGTVDAARGMGMTPAQTFWRVELPLALPVWL 317

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           +G   A       + V+ +   G       GLG YI +  +  +   ++LG +
Sbjct: 318 SGVRQAAVMLVGVAAVAALIGAG-------GLGTYIFKGLQSAATDLILLGAV 363


>gi|315640574|ref|ZP_07895680.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483602|gb|EFU74092.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 306

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 75/168 (44%), Gaps = 11/168 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    L      ++S +    +A  AA        ++   +L P+++++  IP + +   
Sbjct: 82  ALPMILGSFIVTLLSAILATPFAIGAAVFMVEISPKQGQKILQPVIELLVGIPSVVYGFI 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V    +++ G   G  LA  F +F   +  +T     +L ++PR   E S +   
Sbjct: 142 GLSVIVPAIRSVFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALNSVPRYYREASLALGA 200

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + WQ  + + +  ++PG++  ++  M+  +   +A +M++    +IP 
Sbjct: 201 TRWQTTYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAALIPT 248



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 63/171 (36%), Gaps = 9/171 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    ++  I+A+   I   +++           +QP  +LL   P+ V+
Sbjct: 79  LVGALPMILGSFIVTLLSAILATPFAIGAAVFMVEISPKQGQKILQPVIELLVGIPSVVY 138

Query: 434 FPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSF 486
             + +S +       +      +     ++F      +    +   ++ P  ++E + + 
Sbjct: 139 GFIGLSVIVPAIRSVFGGTGFGILAGTFVLFVMILPTVTTMTVDALNSVPRYYREASLAL 198

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+    ++L    P  +T  +     A+  ++  ++       + T+
Sbjct: 199 GATRWQTTYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAALIPTS 249


>gi|297181640|gb|ADI17823.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [uncultured Rhodospirillales bacterium
           HF0200_01O14]
          Length = 385

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 95/277 (34%), Gaps = 15/277 (5%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVI-RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           GY+S  F+  + +    + R + VI  +H  E   Q  +N  V     ++   V   V  
Sbjct: 95  GYASMGFWLFIISLWAFVWRAIDVIANYHSLETAKQQSANVFVPVAFGVWLLFVWEVVVS 154

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-----VVVLIIIASIIWIPVGIWIGFRP 412
           G     +            +    +     ++     V+   ++       V I +   P
Sbjct: 155 GFGVPQVLLPPPSMIGVRFVTSTDIMAADFYQTFVKAVLSGYVMGCGSAFIVAIAVDRVP 214

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   +++A P     P++V    +   +     + +++  T + +L N + G 
Sbjct: 215 FLKRGLLPLGNMVSALPIIGVAPIMVMWFGFDWQSK----AAVIVIMTFFPMLVNTVTGL 270

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A     K++ +++    W     + LP   P+           A   +IV+E      +
Sbjct: 271 NAAGKLEKDLMATYASGYWSTLFRLRLPAAMPFVFNALKINSTLALIGAIVAEFFGTPIV 330

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G+G  I+    + +   V   + +      A 
Sbjct: 331 -----GMGFRISTEVGRMNIDMVWAEIALAALAGTAF 362



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 95/264 (35%), Gaps = 19/264 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
             P  F +    +   +++           P  I      + D+ +   Y +     +LS
Sbjct: 136 FVPVAFGVWLLFVWEVVVSGFGVPQVLLPPPSMIGVRFVTSTDIMAADFYQTF-VKAVLS 194

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             V+     F+ A    +   L   L+P+ +++ ++PI+G     V++F   +  K    
Sbjct: 195 GYVMGCGSAFIVAIAVDRVPFLKRGLLPLGNMVSALPIIGVAPIMVMWFGFDWQSKAA-- 252

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  I     + M  +    L    +  +++  ++    W   + L +P +MP +  
Sbjct: 253 ------VIVIMTFFPMLVNTVTGLNAAGKLEKDLMATYASGYWSTLFRLRLPAAMPFVFN 306

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ +      + +E         P+ G+G  I+  +   ++  +++A + +  +   
Sbjct: 307 ALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEVGRMNID-MVWAEIALAALAGT 360

Query: 255 ----YDQLLFRPMIVWSNKFRLER 274
                   + R    W   FR+ R
Sbjct: 361 AFYGAVAYVERKATSWHPSFRVRR 384


>gi|254690519|ref|ZP_05153773.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus bv. 6 str. 870]
 gi|260546491|ref|ZP_05822231.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260756078|ref|ZP_05868426.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260759302|ref|ZP_05871650.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260761024|ref|ZP_05873367.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260885100|ref|ZP_05896714.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261316878|ref|ZP_05956075.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261751547|ref|ZP_05995256.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|265992422|ref|ZP_06104979.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265999653|ref|ZP_05467267.2| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|297247610|ref|ZP_06931328.1| osmoprotectant transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|260096598|gb|EEW80474.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260669620|gb|EEX56560.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260671456|gb|EEX58277.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676186|gb|EEX63007.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260874628|gb|EEX81697.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|261296101|gb|EEX99597.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261741300|gb|EEY29226.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|263003488|gb|EEZ15781.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263095145|gb|EEZ18814.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|297174779|gb|EFH34126.1| osmoprotectant transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326408246|gb|ADZ65311.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326537961|gb|ADZ86176.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 390

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|152974430|ref|YP_001373947.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023182|gb|ABS20952.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           cytotoxicus NVH 391-98]
          Length = 296

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 15/217 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  + A++IS       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSIGAVMISTPIAIALAIFMNLISPKFGNKVLKPVLELLVGIPSVVYGLLGVTILIP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     +A I  +    +  +      ++  +P D  E S     + WQ    
Sbjct: 140 LLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRAVPFDYLEASYGLGSTKWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +   
Sbjct: 200 VIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTATLTGILTMDMTNT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +        L+ +  +L  I     L+ R +     +
Sbjct: 260 LNGTAWNNALWTLAMILLAISFLFILVIRAIGQRGER 296



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 82/214 (38%), Gaps = 18/214 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++  V++++    +++  V++   IA  + I + +        +  ++P  +LL   P+ 
Sbjct: 70  SFGAVIFIVGSTLVSIGAVMISTPIAIALAIFMNLI--SPKFGNKVLKPVLELLVGIPSV 127

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           V+  L V+ +      S+  +  +L   ++++       + ++      A P D+ E + 
Sbjct: 128 VYGLLGVTILIPLLRDSFGGVGFSLIAGIVVLSIMILPTIASIASDAIRAVPFDYLEASY 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI---------HLR 535
               T W+    +I+P      +TG +     A+  ++  ++     +            
Sbjct: 188 GLGSTKWQAISRVIVPAAKKGILTGIVLGLARAFGEALAVQMVIGNTVKLPEGIYSPTAT 247

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TG+      +T  G+     L  L M    ++ 
Sbjct: 248 LTGILTMDMTNTLNGTAWNNALWTLAMILLAISF 281


>gi|261215353|ref|ZP_05929634.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260916960|gb|EEX83821.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
          Length = 390

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|114769054|ref|ZP_01446680.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [alpha proteobacterium HTCC2255]
 gi|114549971|gb|EAU52852.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [alpha proteobacterium HTCC2255]
          Length = 294

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 68/179 (37%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +IW G IT+   ++     + + I + + I F   +   + P+       P     P++
Sbjct: 89  SLIWHGWITLSATLLGFAFGTALGIILAVGIVFSKSMDMSVMPWVITSQTIPILAIAPMI 148

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   ++  L  +++ ++ + + ++  ++ G  +      +   ++       +  +
Sbjct: 149 IVVLNAVGVSGLLPKAIISMYLSFFPVVVGMVKGLRSPDQMQLDQMRTWSAPKTTSFWKL 208

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 209 RLPSSMPYLFASLKIGVAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIW 262



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 78/223 (34%), Gaps = 9/223 (4%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94
           LL    +         ++       SL  +   T    L           + A     S+
Sbjct: 64  LLPSPHQVIKEIYKTTVLKKVTSKRSLIWHGWITLSATLLGFAFGTALGIILAVGIVFSK 123

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            + M ++P +   Q+IPIL      +V    +    ++   + +++  F    + +   M
Sbjct: 124 SMDMSVMPWVITSQTIPILAIAPMIIVVLNAVGVSGLLPKAIISMYLSF----FPVVVGM 179

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
            + L +  +   +  R++       FW L +P SMP L  ++ + ++      +  E+  
Sbjct: 180 VKGLRSPDQMQLDQMRTWSAPKTTSFWKLRLPSSMPYLFASLKIGVAASLVGAIVGELPT 239

Query: 215 VGDTVIPLPGI-----GSYIALAIKEQDLLAILYAMLTMLGVI 252
                +    +     G  I +         +  +++ ++GVI
Sbjct: 240 GAVAGLGARLLAGSYYGQTIQIWSALICAAILAASLVAIIGVI 282


>gi|148655949|ref|YP_001276154.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148568059|gb|ABQ90204.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 213

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 79/195 (40%), Gaps = 15/195 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +  +    ++ I+L+       + A+  RL  +++ IL ++ +IP L         F+ 
Sbjct: 16  GQHLVMSGLSLAIALVIALPLGIVCARVTRLRNLVLGILGVIYTIPSLSL-------FVL 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P   +G   A I  +  +Q+  +  ++   L  I   + E +R   ++  Q+ W + +
Sbjct: 69  LIPFTGLGLRPAVIALVAYAQLV-LVRNVVVGLTGIDPAIVEAARGMGMTAAQRLWRVEL 127

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + ++M         +  I  G   + L          ++  +   I+   
Sbjct: 128 PLALPIILAGVRVAMLSIIAIGTIAAFINAGGLGLLLF-------DGVRSSNPEKIIAGA 180

Query: 246 LTMLGVIFLYDQLLF 260
           + +  +    + +L+
Sbjct: 181 VAVSALAISANGILW 195



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 73/204 (35%), Gaps = 11/204 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +   +  YV+ L    +    + + IA +I +P+GI       + + +     ++   P+
Sbjct: 3   YLIDNFPYVLSLIGQHLVMSGLSLAIALVIALPLGIVCARVTRLRNLVLGILGVIYTIPS 62

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              F   V  + +  L     +  L+ +  Q  ++ NV+ G +       E A    +T 
Sbjct: 63  LSLF---VLLIPFTGLGLRPAVIALVAY-AQLVLVRNVVVGLTGIDPAIVEAARGMGMTA 118

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P  + G   A         ++   + G + L          +     
Sbjct: 119 AQRLWRVELPLALPIILAGVRVAMLSIIAIGTIAAFINAGGLGLLLF-------DGVRSS 171

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574
           +  +++ G + +    ++ N  LW
Sbjct: 172 NPEKIIAGAVAVSALAISANGILW 195


>gi|313681254|ref|YP_004058992.1| binding-protein-dependent transport systems inner membrane
           component [Sulfuricurvum kujiense DSM 16994]
 gi|313154114|gb|ADR32792.1| binding-protein-dependent transport systems inner membrane
           component [Sulfuricurvum kujiense DSM 16994]
          Length = 269

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 14/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  R+   + I+     +   +         +L P    +  IP +  L   ++ F 
Sbjct: 74  TVASLNRIAQGLGIATAVGLILGIVQGTLPLFRSLLSPFSAAVSLIPPIAILPILLIIFG 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                     E A +  I       +     Q    +  +L    ++   S WQ    + 
Sbjct: 134 LE--------ESAKVALIAIGVAPFLIRDTQQRSMELSEELLIKVQTLGASTWQIILRVV 185

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  MP L+  + +S+   W F++ +E I   +      G+G  I L  +  ++  IL  
Sbjct: 186 LPHVMPRLLDALRLSLGAAWLFLITAEAIASSE------GLGYRIFLMRRYMEMDVILPY 239

Query: 245 MLTMLGVIFLYDQLL 259
           +  +  + FL D +L
Sbjct: 240 VAWITLLAFLMDWIL 254



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 73/204 (35%), Gaps = 10/204 (4%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++      +   +      ++ R+   + IA+ + + +GI  G  P   S + PF+   A
Sbjct: 58  VMEPDELTEEPILYTDTVASLNRIAQGLGIATAVGLILGIVQGTLPLFRSLLSPFS---A 114

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A        ++   +  + L  +  ++ L+  G   +++ +    +     +      + 
Sbjct: 115 AVSLIPPIAILPILLIIFGLEESAKVA-LIAIGVAPFLIRDTQQRSMELSEELLIKVQTL 173

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             + W+    ++LP + P  +     + G AW   I +E  +       + GLG  I   
Sbjct: 174 GASTWQIILRVVLPHVMPRLLDALRLSLGAAWLFLITAEAIA------SSEGLGYRIFLM 227

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
                   ++  V  +      ++
Sbjct: 228 RRYMEMDVILPYVAWITLLAFLMD 251


>gi|239622853|ref|ZP_04665884.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239514850|gb|EEQ54717.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 335

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 72/204 (35%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                          + A + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRNAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 211 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 271 LKDSNWYPLTIGLNQWKDQASTAG 294



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTV 120
           ++   T L ++     + L   +     AK R      V V I+  + S+P +       
Sbjct: 123 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRNAVFVVIIGAI-SVPGIALAVPQF 181

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F  L           A+        + +      S   +P++L E +R    S ++ F
Sbjct: 182 LLFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTF 237

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWF 205
           W + +P   PG+V   + ++   W 
Sbjct: 238 WQISLPLLAPGIVTTALFTIVATWN 262


>gi|56964355|ref|YP_176086.1| phosphate ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56910598|dbj|BAD65125.1| phosphate ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 311

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 11/207 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F+++ G+   ++ G+        +        D       A        +  ++S L   
Sbjct: 47  FLVIRGLQAFVIDGVSPIEFLTSLDWNPTRGADAGGPSYGALPFIFGSFAVTILSALIAA 106

Query: 85  VYATLAAKS------RRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGA 134
                AA             +L P ++++  IP + +    L+  V +  +   G+  G 
Sbjct: 107 PLGIGAAIYMTEIAPSWGRKILQPAVELLVGIPSVVYGFIGLSVIVPFIRDHVGGQGFGL 166

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I           + S   +L +IP  L E S +   + WQ  + + +P + P L+ 
Sbjct: 167 LSAMIVLSIMILPTVTSIST-DALRSIPGGLRESSLALGATRWQTIYRVLIPAAGPMLLT 225

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +++ M+  +   +A +M++     I 
Sbjct: 226 AVVLGMARAFGEALAVQMVIGNSRTIA 252



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 27/210 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
             + I++++I  P+GI                 +QP  +LL   P+ V+  + +S +   
Sbjct: 95  FAVTILSALIAAPLGIGAAIYMTEIAPSWGRKILQPAVELLVGIPSVVYGFIGLSVIVPF 154

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYI 497
                      L  +++++       + ++      + P   +E + +   T W+    +
Sbjct: 155 IRDHVGGQGFGLLSAMIVLSIMILPTVTSISTDALRSIPGGLRESSLALGATRWQTIYRV 214

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--------------GAYI 543
           ++P   P  +T  +     A+  ++  ++       +  + +              G  +
Sbjct: 215 LIPAAGPMLLTAVVLGMARAFGEALAVQMVIGNSRTIAESLIDSTATLTTIITLNMGHTV 274

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             S +      + L +L+M    + L RFL
Sbjct: 275 PGSIDNNVLWSLGLILLVMSYLFIILVRFL 304


>gi|332704095|ref|ZP_08424183.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554244|gb|EGJ51288.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 416

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 78/236 (33%), Gaps = 13/236 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
            W  +V    +  A       +    Y      +      +    + +  ++ + IP+G+
Sbjct: 168 VWLWLVGLAGLMAAGGLDSLAITKEFYARQSRFLGELSAHLTITGLSVAASATVGIPLGL 227

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN------------PNLWLSL 454
            +  R  ++ ++     +    P+   F L++  +S                       +
Sbjct: 228 LLHVRRLLAPRVFLVLNVAQTIPSLALFGLLMVPLSLLAERFPALGKLGVQGIGAAPAII 287

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +       ++ N  AG ++      +  +   ++ W+  R + +P   P  + G   A 
Sbjct: 288 ALTLYALLPVVRNTYAGLASIDQAAVDAGTGMGMSKWQLLRDVTIPLALPAILGGIRIAL 347

Query: 515 G-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                NA++ + + + G       GLG    +    G+ P V+L V        A+
Sbjct: 348 VQNIGNAAVAALIGAGGFGVFIFQGLGQAATDLVLLGALPTVLLAVAADALMQFAI 403



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 15/194 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY-------FMNL 126
            ++  S         L    R L   +  +L++ Q+IP L      +V        F  L
Sbjct: 213 LSVAASATVGIPLGLLLHVRRLLAPRVFLVLNVAQTIPSLALFGLLMVPLSLLAERFPAL 272

Query: 127 YPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
               V G   A AI A+    +  +  + Y  L +I +   +      +S WQ    + +
Sbjct: 273 GKLGVQGIGAAPAIIALTLYALLPVVRNTYAGLASIDQAAVDAGTGMGMSKWQLLRDVTI 332

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P ++  + +++         + +I  G       G G +I   + +     +L   
Sbjct: 333 PLALPAILGGIRIALVQNIGNAAVAALIGAG-------GFGVFIFQGLGQAATDLVLLGA 385

Query: 246 LTMLGVIFLYDQLL 259
           L  + +    D L+
Sbjct: 386 LPTVLLAVAADALM 399


>gi|297544799|ref|YP_003677101.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296842574|gb|ADH61090.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 217

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   ++ +  I+ +F      L           +  L  +L  I++
Sbjct: 1   MSETINLLLVGTWQTIYMVVVSTFIATIFGVPLGVLLMVTDKGQILHNEPLNKILGTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F  L  GK IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRLLVGKAIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E +++   S  Q    + VP ++P +   + ++
Sbjct: 119 IEAAKAMGASPLQIITKVLVPEALPSIAAGITIT 152



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV   IA+I  +P+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVVSTFIATIFGVPLGVLLMVTDKGQILHNEPLNKILGTIVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  ++  +   I F                 E A +   +  +  
Sbjct: 74  LIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGVIEAAKAMGASPLQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TKVLVPEALPSIAAGITIT 152


>gi|91974740|ref|YP_567399.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
 gi|91681196|gb|ABE37498.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisB5]
          Length = 274

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 90/274 (32%), Gaps = 20/274 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------Q 374
           G        + +   S  RV     +    V     +    Q   Y++            
Sbjct: 3   GRAPTGPRPSRISAASWLRVLLPFVVLAAGVAVWDLVVRINQIPPYVLPGPGLVWQTLVA 62

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           D   +      T++  +   + A+I  + + +       +   + P+A +L   P     
Sbjct: 63  DWPILSVSLLATLWTTLKGFLAAAIGGVALALLFNQSRWVEYSLFPYAVVLQVTPVIAIA 122

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL++      +L     + +       + +L N   G ++   +   +   +  +  +  
Sbjct: 123 PLLLI-----YLPQETAVVVCAWIVAFFPVLANTTLGLNSVDRNLAGLFRLYGASPLQTL 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   PY + G   A G +   ++V+E+A+          L   IAES  + + P 
Sbjct: 178 LRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSG--LAYRIAESGYRLNIPR 235

Query: 555 VVLGV-------LIMCCFVLALNRFLWHPLYLYG 581
           +   +       +++   +  ++  L    +   
Sbjct: 236 MFAALLLLSAAGIVIYLLLALVSHLLLRRWHESA 269



 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 10/199 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+      L A V V  ++  +   I    +P   +    +  D   L      T    L
Sbjct: 21  RVLLPFVVLAAGVAVWDLVVRINQ-IPPYVLPGPGLVWQTLVADWPILSVSLLATLWTTL 79

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              + + +     A L  +SR +   L P   ++Q  P++      ++Y         + 
Sbjct: 80  KGFLAAAIGGVALALLFNQSRWVEYSLFPYAVVLQVTPVIAIAPLLLIY---------LP 130

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            E A +   +    + +  +    L ++ R+L  + R +  S  Q    L +P ++P ++
Sbjct: 131 QETAVVVCAWIVAFFPVLANTTLGLNSVDRNLAGLFRLYGASPLQTLLRLKLPAALPYIL 190

Query: 194 WNMMMSMSGGWFFVVASEM 212
             + ++        V +E+
Sbjct: 191 GGLRIAGGLSLIGAVVAEI 209


>gi|319784151|ref|YP_004143627.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170039|gb|ADV13577.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 249

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 18/188 (9%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            A V + +     A L  +        +   +++I Q+ P +  L   V           
Sbjct: 61  IATVAATIVAVALAILVTRPAGAEFLPLSRSLVNIGQTFPPVAVLALAVPAVG------- 113

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E   + A+F   +  +  +    L  +P ++ E +R   ++GWQ+   + +P S P 
Sbjct: 114 -FGEKPTLIALFLYGLLPIFENALTGLTTLPANVVEAARGAGMTGWQRLTKVELPLSAPI 172

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S       VV S       + +    +G  I   +   +L  IL   L +  +
Sbjct: 173 ILGGIRLS-------VVISLATATIGSTVAAKTLGEVIIAGLLSNNLAFILQGGLIVAAL 225

Query: 252 -IFLYDQL 258
            + +YD L
Sbjct: 226 AVLIYDGL 233



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           +  + A+I+ + + I +  RP  +  +   +    +   FP      L V  V +     
Sbjct: 61  IATVAATIVAVALAILV-TRPAGAEFLPLSRSLVNIGQTFPPVAVLALAVPAVGFGEKPT 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L L  +      I  N + G +  P +  E A    +TGW+    + LP   P  + 
Sbjct: 120 LIALFLYGLL----PIFENALTGLTTLPANVVEAARGAGMTGWQRLTKVELPLSAPIILG 175

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   +        ++S   +     +    LG  I       +   ++ G LI+    + 
Sbjct: 176 GIRLS-------VVISLATATIGSTVAAKTLGEVIIAGLLSNNLAFILQGGLIVAALAVL 228

Query: 569 L 569
           +
Sbjct: 229 I 229


>gi|306842500|ref|ZP_07475151.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
 gi|306287356|gb|EFM58836.1| binding-protein-dependent transport systems inner membrane
           component [Brucella sp. BO2]
          Length = 196

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVYF 123
            +    +  A   S L     A    + +      +   +++I Q+ P +  L   V  F
Sbjct: 1   MQHLGLVALATFCSTLIAVAMAIFVTRRQGTEFLPLSRSLVNIGQTFPPVAVLALAVPVF 60

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                      +   + A+F   +  +  +    L ++P  + E +R   ++G Q+ + +
Sbjct: 61  G--------FGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAARGMGMTGMQRLFKV 112

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +MP ++  + +S   G         +           +G  I   +   +L  +L 
Sbjct: 113 EIPLAMPVILAGIRLSAVIGLATATIGSTVAAKT-------LGEVIIAGLISNNLAFVLE 165

Query: 244 AMLTMLGVIFLY 255
             L +  +  L 
Sbjct: 166 GGLVVAALAILI 177



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHIS--SKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +  V +    +++I + + I++  R         +    +   FP      L V    + 
Sbjct: 4   LGLVALATFCSTLIAVAMAIFVTRRQGTEFLPLSRSLVNIGQTFPPVAVLALAVPVFGFG 63

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                + L L  +      I  N + G ++ P    E A    +TG +    + +P   P
Sbjct: 64  DKPTLIALFLYGLL----PIFENTLTGLTSLPPPIVEAARGMGMTGMQRLFKVEIPLAMP 119

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G   +        ++    +     +    LG  I       +   V+ G L++  
Sbjct: 120 VILAGIRLSA-------VIGLATATIGSTVAAKTLGEVIIAGLISNNLAFVLEGGLVVAA 172

Query: 565 FVLAL 569
             + +
Sbjct: 173 LAILI 177


>gi|291550509|emb|CBL26771.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Ruminococcus torques L2-14]
          Length = 320

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 74  SAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++I+  F    A    +   +       PI++I   IP + +    LT  +     ++
Sbjct: 107 LALLIATPFAVGSAIFMIEIAPKFGEKFYRPIVEIFAGIPSVVYGWVGLTVLIPAIKKVF 166

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +       ++     S+ ++P+D    +     + WQ  + + +P 
Sbjct: 167 HLQVGHSVLAAGIVLALMIFPTISNVAADSIHSVPKDYRMAAYGLGSTRWQSIYKVVIPA 226

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           +  G++  +++ ++  +   +A  M+ +G T     G+
Sbjct: 227 AGSGILSGIILGLARAFGEALAVAMV-IGQTTALPKGL 263



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 15/163 (9%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
           +    +A +I  P  VG  I              +P  ++ A  P+ V+  + ++ +   
Sbjct: 102 LCTCGLALLIATPFAVGSAIFMIEIAPKFGEKFYRPIVEIFAGIPSVVYGWVGLTVLIPA 161

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRY 496
                +  +  ++  + +++    +  + NV A    + P D++  A     T W+    
Sbjct: 162 IKKVFHLQVGHSVLAAGIVLALMIFPTISNVAADSIHSVPKDYRMAAYGLGSTRWQSIYK 221

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++P      ++G I     A+  ++   +   G       GL
Sbjct: 222 VVIPAAGSGILSGIILGLARAFGEALAVAMV-IGQTTALPKGL 263


>gi|134045531|ref|YP_001097017.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanococcus maripaludis C5]
 gi|132663156|gb|ABO34802.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Methanococcus maripaludis C5]
          Length = 291

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I   +  NI  L A +  + I +++L  I  +     +V        +   P Y S    
Sbjct: 6   IGESVLENILKLSALLSSVVIFSMVLFLIISSLPVFSVVSPFDFVFGLDWSPNYDSYGIF 65

Query: 71  RMLSA----MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----L 116
            M+       V++L+F+       A        +++  +L P ++I+ +IP + +    +
Sbjct: 66  PMVVGSFLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGM 125

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V    +++      + LAA   +    V  +T     ++ ++P  L+E S +   + 
Sbjct: 126 VLLVPLIRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPSQLKEGSLAMGATR 185

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           WQ    + +P S+ G++  +++ M       +A  M+   
Sbjct: 186 WQTIKKVILPASLSGILSGVILGMGRAIGETMAVLMVAGN 225



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 81/221 (36%), Gaps = 12/221 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCIT 386
           EN L+L +      +  +  F ++  + +        ++         D   +  +   +
Sbjct: 12  ENILKLSALLSSVVIFSMVLFLIISSLPVFSVVSPFDFVFGLDWSPNYDSYGIFPMVVGS 71

Query: 387 MFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPL 436
               V+ ++ +  + +   I++       + + ++P  ++L A P+ V+         PL
Sbjct: 72  FLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGMVLLVPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    +       L  S+++       I        ++ P+  KE + +   T W+  + 
Sbjct: 132 IRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPSQLKEGSLAMGATRWQTIKK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP      ++G I   G A   ++   + +     + T+
Sbjct: 192 VILPASLSGILSGVILGMGRAIGETMAVLMVAGNWPLIPTS 232


>gi|118471564|ref|YP_886839.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172851|gb|ABK73747.1| ABC transporter, membrane spanning protein, putative [Mycobacterium
           smegmatis str. MC2 155]
          Length = 260

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 10/161 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG     S  + P    L + P  V +P+ +  +    L+          F     +   
Sbjct: 93  IGLNAFWSRTLSPLIFSLNSVPKIVLYPIFLLFLGLGALSQ----VSFAFFQGLLPMFLI 148

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           ++ G++       ++A+S  ++     R I++P + P  +T    + G  +   I++E+ 
Sbjct: 149 MLEGSAGVNRLHLKLAASLQMSYPALLRKIVVPQLVPTVLTAMRVSFGLTFVGLILAEMF 208

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           S       TTGLG  +  +  +     ++  VL++    L 
Sbjct: 209 SG------TTGLGYELLRNVTQVRMANILGEVLLITVIALI 243



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 74/212 (34%), Gaps = 14/212 (6%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
             P + +  +   L  +        T L +  A  + +    V   L   +      L P
Sbjct: 46  PTPAESISTLGAELTDNGFRASVGSTVLNLAIAYSLVVAVGGVLGVLIGLNAFWSRTLSP 105

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           ++  + S+P +      +++       +V  A        F   +  M   M +    + 
Sbjct: 106 LIFSLNSVPKIVLYPIFLLFLGLGALSQVSFA--------FFQGLLPMFLIMLEGSAGVN 157

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           R   +++ S ++S       + VP  +P ++  M +S    +  ++ +EM          
Sbjct: 158 RLHLKLAASLQMSYPALLRKIVVPQLVPTVLTAMRVSFGLTFVGLILAEMFSGTT----- 212

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            G+G  +   + +  +  IL  +L +  +  +
Sbjct: 213 -GLGYELLRNVTQVRMANILGEVLLITVIALI 243


>gi|295835331|ref|ZP_06822264.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
 gi|197696402|gb|EDY43335.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
          Length = 226

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           + +    +T   H L    ++      +A+ I+L+     A LA + R     ++ +  +
Sbjct: 16  EWICGTYLTTRRHVLLDAVAQHIELTAAAVGIALVIAVPLAVLARRLRWASGPVLALTTV 75

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + +IP L   +  +  +       V G  L          +  +  ++   L  +P +  
Sbjct: 76  LYTIPSLAMFSLLLPVYGLSATLVVAGLVL--------YSLTLLVRNLLAGLRAVPEETR 127

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + +R       +    + +P ++P     + ++M      V A  ++ VG  ++   G+G
Sbjct: 128 QAARGMGYGPLRLLLAVELPLALPAAFAGLRIAM------VSAVSLVTVG-AIVGFGGLG 180

Query: 227 SYIALAIKEQDLLAILYAML 246
           + I   +       +L A +
Sbjct: 181 NLIYQGMNTYFKAQVLTASV 200



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 11/155 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + IA +I +P+ +        S  +     +L   P+   F L++            
Sbjct: 42  AAAVGIALVIAVPLAVLARRLRWASGPVLALTTVLYTIPSLAMFSLLLPVYGLSAT---- 97

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   ++  +   ++ N++AG  A P + ++ A        R    + LP   P    G 
Sbjct: 98  LVVAGLVLYSLTLLVRNLLAGLRAVPEETRQAARGMGYGPLRLLLAVELPLALPAAFAGL 157

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             A   A +   V  +  +G       GLG  I +
Sbjct: 158 RIAMVSAVSLVTVGAIVGFG-------GLGNLIYQ 185


>gi|322688647|ref|YP_004208381.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|320459983|dbj|BAJ70603.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 336

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   F+YQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGKTFALFDNIATVFSYQDGIFARWL-FNTILYVVVGAGGATLLAIMGGYAL 151

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K      + A + P            +   L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFVVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSEQAVPQELLEAARVDGASEFRTFWQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 272 LKDADWYPLTIGLNQWKDQASTAG 295



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWLFNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFVVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P++L E +R    S ++ FW
Sbjct: 184 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPQELLEAARVDGASEFRTFW 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QISLPLLAPGIVTTALFTIVATWN 263


>gi|90418612|ref|ZP_01226523.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336692|gb|EAS50397.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 252

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           V+    +T        ++ + I IP GI +     +    + +    AA P  + +PL +
Sbjct: 57  VVPRFVLTAGEAFAAGLLVAGIGIPAGILLFSVNLLRRATENWVAAFAAAPVVLVYPLFL 116

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +  +  +        ++   + G S        V +SF++T W+ +R I+
Sbjct: 117 VIFGRS----SWTIIAIGTVAGLPPVILKTLEGLSGVRPVLIRVGASFNLTRWQQFRTIL 172

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
            P   P    G       A    +  E        +   GLG  I E +E+   P     
Sbjct: 173 FPAAVPTIFAGLRLGLIFAMINVVGVEFL------INFGGLGPLINELSERYDMPGTYAA 226

Query: 559 VLIMCCFVLAL 569
           +  +    +  
Sbjct: 227 ICFVVLVSVLF 237



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 18/252 (7%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQET----TVPRDIVDIVPITLDVHSLPQYASRTT 69
           R  P    L AF++ + ++ IL+           +P  +V  +   +    +      T 
Sbjct: 6   RFGPATLGLGAFIMFLVVVEILIRAGVINGYIVPLPSAVVVALERVVTEEGVVPRFVLTA 65

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
               +A ++          L      L       +    + P++      +V F      
Sbjct: 66  GEAFAAGLLVAGIGIPAGILLFSVNLLRRATENWVAAFAAAPVVLVYPLFLVIFGR---- 121

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
               +    I     + +  +     + L  +   L  V  SF L+ WQ+F  +  P ++
Sbjct: 122 ----SSWTIIAIGTVAGLPPVILKTLEGLSGVRPVLIRVGASFNLTRWQQFRTILFPAAV 177

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P +   + + +      VV  E +      I   G+G  I    +  D+     A+  ++
Sbjct: 178 PTIFAGLRLGLIFAMINVVGVEFL------INFGGLGPLINELSERYDMPGTYAAICFVV 231

Query: 250 GVIFLYDQLLFR 261
            V  L+  L+ R
Sbjct: 232 LVSVLFFLLVER 243


>gi|313885228|ref|ZP_07818980.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619919|gb|EFR31356.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 209

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 15/202 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
               L Q        +  AM+ +LLF+     L  +   L    + +L ++ +IP L   
Sbjct: 8   SSDKLIQAFVEHVQLVSLAMMFALLFSLALVALIRRWPNLRNGSIYLLSVIYAIPSLA-- 65

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F  L P   +G   A I  +   Q + +  ++   L  +   + EV+ +  ++ 
Sbjct: 66  -----VFALLIPVTGLGKTTAIIVLVVYVQ-YILVRNILLGLDQVDDRVLEVADAMGMTQ 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P +MP +V  + +S         ++  I     VI   G+G  +   ++  
Sbjct: 120 RQVLHRVQIPLAMPTIVTGLKIS-------TTSTVGIATMAAVINGGGLGKILFEGLRTM 172

Query: 237 DLLAILYAMLTMLGVIFLYDQL 258
           DL+ +++  L  + +  L +  
Sbjct: 173 DLIKLVWGTLLTVILCLLVNIF 194



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 12/189 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + ++ A +  + +   I   P++ +       ++ A P+   F L++           
Sbjct: 23  VSLAMMFALLFSLALVALIRRWPNLRNGSIYLLSVIYAIPSLAVFALLIPVTGLGKTT-- 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               ++++   Q+ ++ N++ G     +   EVA +  +T  +    + +P   P  VTG
Sbjct: 81  --AIIVLVVYVQYILVRNILLGLDQVDDRVLEVADAMGMTQRQVLHRVQIPLAMPTIVTG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++ V + G       GLG  + E        ++V G L+     L +
Sbjct: 139 LKISTTSTVGIATMAAVINGG-------GLGKILFEGLRTMDLIKLVWGTLLTVILCLLV 191

Query: 570 NRFLWHPLY 578
           N F W+ LY
Sbjct: 192 NIF-WNLLY 199


>gi|126727117|ref|ZP_01742954.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126703545|gb|EBA02641.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 280

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 23/250 (9%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQ--SIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           L + ++ +         ++ G+ I + W+   IG+ VN         ++        R+ 
Sbjct: 21  LANGKQSNAWAMQILIPLIFGLTIVLVWECFVIGFEVNPVFLPRPSDIVLRMVSETSRLW 80

Query: 392 VLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
                  I     G  IG                ++  + P    +AA P     P+ V 
Sbjct: 81  ADFYQTIIKGALTGYIIGGLAALAIAILADRSDFLTRGVLPVGSFMAALPIVGIAPIFVK 140

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +    +++++ F     IL N++AG        +++  ++    W     + +
Sbjct: 141 WFGSDWESKAAVVAVMVFF----PILVNIVAGLRDTTVMQRDLMRTYGAGYWPTLIKLRI 196

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P+   G   A   A   +IV+E          T G+G  I+ S  + +   V   +
Sbjct: 197 PAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PTVGMGFRISTSFGQLALDMVWAEI 251

Query: 560 LIMCCFVLAL 569
            +      A 
Sbjct: 252 AVAALAGSAF 261



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 65/183 (35%), Gaps = 16/183 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           +S  L   ++P+   M ++PI+G     V +F + +  K           +     + + 
Sbjct: 111 RSDFLTRGVLPVGSFMAALPIVGIAPIFVKWFGSDWESKAA--------VVAVMVFFPIL 162

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++   L +      ++ R++    W     L +P +MP +   + ++ +      + +E
Sbjct: 163 VNIVAGLRDTTVMQRDLMRTYGAGYWPTLIKLRIPAAMPFIFNGLKIATTLALIGAIVAE 222

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLLFRPMIVWSN 268
                    P  G+G  I+ +  +  L  +   +         +     L+ R +  W  
Sbjct: 223 FFGS-----PTVGMGFRISTSFGQLALDMVWAEIAVAALAGSAFYGIVTLIERGVTFWHP 277

Query: 269 KFR 271
             R
Sbjct: 278 SQR 280


>gi|194017678|ref|ZP_03056288.1| phosphate ABC transporter, permease protein PstC [Bacillus pumilus
           ATCC 7061]
 gi|194010578|gb|EDW20150.1| phosphate ABC transporter, permease protein PstC [Bacillus pumilus
           ATCC 7061]
          Length = 308

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 84/210 (40%), Gaps = 14/210 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F+ + G+ + +++G+     P + +  +       +    A       ++  ++S L
Sbjct: 45  ITIFLGIKGLQSFIVNGVS----PIEFLTSINWNPTAENPQYGAFPFIFGSIAVTLLSAL 100

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKV 131
                    A             +L P+++++  IP + +    LT  V +  +      
Sbjct: 101 IAAPLGIAGAIFMTEIAPAWGRKILQPVIELLVGIPSVVYGFIGLTVLVPFIGHFKSSGS 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +T     ++ ++P+ L E S +   + WQ    + VP ++P 
Sbjct: 161 GHSVLAGTIVLSIMILPTVTSIATDAMGSLPKSLREGSYALGATRWQTIRRVLVPAALPT 220

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           L+  +++ M+  +   +A +M++     +P
Sbjct: 221 LMTAVVLGMARAFGEALAVQMVIGNTRNLP 250



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 14/158 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
           + + +++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 92  IAVTLLSALIAAPLGIAGAIFMTEIAPAWGRKILQPVIELLVGIPSVVYGFIGLTVLVPF 151

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       +         + P   +E + +   T W+  R 
Sbjct: 152 IGHFKSSGSGHSVLAGTIVLSIMILPTVTSIATDAMGSLPKSLREGSYALGATRWQTIRR 211

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +++P   P  +T  +     A+  ++  ++      +L
Sbjct: 212 VLVPAALPTLMTAVVLGMARAFGEALAVQMVIGNTRNL 249


>gi|169335560|ref|ZP_02862753.1| hypothetical protein ANASTE_01975 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258298|gb|EDS72264.1| hypothetical protein ANASTE_01975 [Anaerofustis stercorihominis DSM
           17244]
          Length = 295

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 80/225 (35%), Gaps = 21/225 (9%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF- 115
                  L  + A   +++       L A       ++++   + P ++I+  IP + + 
Sbjct: 69  YGILPMILSSICATFGAIIIGVPIGVLTAVFLSEIANKKVANFIRPFIEILSGIPSVIYG 128

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   V +   ++           +  +    +  +      S+ ++P + +E S   
Sbjct: 129 FVGLILLVPFIAKVFDLSYGANLFTGMLVLSIMILPTIVTISENSIRSLPSEYKEASLGL 188

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP---------LP 223
             +  Q  + + +P +  G+  ++++ +       +A  M+      +P           
Sbjct: 189 GATKMQTIFKILIPAARSGITTSIVLGIGRAIGETMAVIMVTGNSVNMPDIFQSVRLMTS 248

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268
           GI S ++ A+        L+A+  +L +  +   L+    +  ++
Sbjct: 249 GIVSEMSYAVGLH--KDALFAIGLVLFIFIMIINLILNVFLAKAD 291



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 83/248 (33%), Gaps = 24/248 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           + ++ G           ++             +     +   +     A II +P+G+  
Sbjct: 37  YMIISGFPAVKEIGLFNFLFGTVWNPTGANPSYGILPMILSSICATFGAIIIGVPIGVLT 96

Query: 409 GF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSL 454
                      +++ I+PF ++L+  P+ ++         P +       +        L
Sbjct: 97  AVFLSEIANKKVANFIRPFIEILSGIPSVIYGFVGLILLVPFIAKVFDLSYGANLFTGML 156

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++       I+        + P+++KE +     T  +    I++P       T  +   
Sbjct: 157 VLSIMILPTIVTISENSIRSLPSEYKEASLGLGATKMQTIFKILIPAARSGITTSIVLGI 216

Query: 515 GGAWNASIVSEVAS---------WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G A   ++   + +         +  + L T+G+ + ++ +        +    L++  F
Sbjct: 217 GRAIGETMAVIMVTGNSVNMPDIFQSVRLMTSGIVSEMSYA-VGLHKDALFAIGLVLFIF 275

Query: 566 VLALNRFL 573
           ++ +N  L
Sbjct: 276 IMIINLIL 283


>gi|332559104|ref|ZP_08413426.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|332276816|gb|EGJ22131.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 238

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 82/221 (37%), Gaps = 14/221 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + L G     +P  +  +  +  +   L +    T   +L  + + LL         A 
Sbjct: 17  VVSLSGAPPYILPGPVAVLRALADNRGMLARNGLATLAEILLGLGLGLLIGLAAGLATAL 76

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S ++  +L P+L + Q++P+        ++       KV    L   F + ++       
Sbjct: 77  STQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSKVAVVVLITFFPVASA------- 129

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            ++  L   P    +++R  R   W+   +L +P ++P L   + ++       V A   
Sbjct: 130 -LHDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIA------AVYAPIG 182

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            V+G+ V    G+G  + LA        +  A+  +  +  
Sbjct: 183 AVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAMTL 223



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   ++P   L  A P     P++   + Y   +       +++  T + +   +
Sbjct: 75  ALSTQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSK----VAVVVLITFFPVASAL 130

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  A P    ++A       WR   ++ LP   P+       A   A   +++ E   
Sbjct: 131 HDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIAAVYAPIGAVIGEWVG 190

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  +  +  +     +   + ++    L L
Sbjct: 191 ------SSAGLGHLMLLANARMKTDLMFAALAVLAAMTLGL 225


>gi|262275921|ref|ZP_06053730.1| binding-protein-dependent transport systems inner membrane
           component [Grimontia hollisae CIP 101886]
 gi|262219729|gb|EEY71045.1| binding-protein-dependent transport systems inner membrane
           component [Grimontia hollisae CIP 101886]
          Length = 582

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 81/514 (15%), Positives = 159/514 (30%), Gaps = 59/514 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKV 131
             +++++ +     A   ++ +  G VL+  L I+  I P         + F       +
Sbjct: 90  FMSVIVASIIAMPLAYFTSRFQFRGTVLIQTLGIVPLIMPPFIGAIAMQLLFGENGSMNL 149

Query: 132 IGAE------------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           + +E               IF         +  ++  +L NI R +EE ++S   SG + 
Sbjct: 150 LLSEHLGFTIPLMEGLNGVIFVQSVHYFPFILINLSAALQNIDRSMEESAQSLGSSGLRL 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  +  P +MPG V    +     +  +    ++ V + + P          A      +
Sbjct: 210 FRRIVFPLAMPGYVAGASLVFVKVFDDLGTPLLLNVNNMLAP---------QAYLRISSV 260

Query: 240 AILYAMLTMLGVIFLY--DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
            I   M  ++ VI +      L+        K       G        L    K      
Sbjct: 261 GISDPMGYVISVILVAFSAFALWVSFQALKGKDYSTSQKGGGGLSKRELRPLEKVGCYAV 320

Query: 298 IGYSSWNFFSP---LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           IG       +P   L         +   +   F  +       Q   ++ +   +  + G
Sbjct: 321 IGLILALVLAPHFALLLLSFGTIWSFSPLPDGFTLDHYTTAITQASEFITNTLLYAGLAG 380

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           +   I   +I Y+V      ++    WL           +   ++  + +G  IG+    
Sbjct: 381 IIDVILGTAIAYLVWR---TNIAGRKWLDF-------GAMAALAVPGVVLG--IGYLRTF 428

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
                P            ++ ++V  +S   L                Y L + +A    
Sbjct: 429 YDVELPVIGT----SMATWWGIIVIALSVRRLP---------------YALRSCVAALQQ 469

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
               F+E + +   T     R I++P +    + G +TA   A      + +        
Sbjct: 470 VSPSFEEASENLGATRATTIRRIVVPLMAAGILAGFVTAFATAAVELSATIMLVSQESDA 529

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                G Y+   +  G  P   LGV+ +    LA
Sbjct: 530 PLA-YGLYLFMQSAAGRGPGAALGVIAVVIVGLA 562



 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 71/229 (31%), Gaps = 38/229 (16%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
           +L         +  ++    R  + L +    +   V I +    +  I   F   D   
Sbjct: 5   SLTQPNKPVRTHSKRIWDKVREDWALYMSAILIALFVVIFLFVPVLKVIFVAFQDPDGAL 64

Query: 379 VIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
            +                  + +   + +I+ASII +P+  +        + +    Q L
Sbjct: 65  TLVNFKDFFGSSLFRESFFNSFYVAFMSVIVASIIAMPLAYFTSRFQFRGTVL---IQTL 121

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLL------------------MIFGTQWY---I 464
              P  +  P + +         N  ++LL                  +   +  Y   I
Sbjct: 122 GIVP-LIMPPFIGAIAMQLLFGENGSMNLLLSEHLGFTIPLMEGLNGVIFVQSVHYFPFI 180

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L N+ A         +E A S   +G R +R I+ P   P YV GA   
Sbjct: 181 LINLSAALQNIDRSMEESAQSLGSSGLRLFRRIVFPLAMPGYVAGASLV 229


>gi|157692993|ref|YP_001487455.1| phosphate ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681751|gb|ABV62895.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 308

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 84/210 (40%), Gaps = 14/210 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F+ + G+ + +++G+     P + +  +       +    A       ++  ++S L
Sbjct: 45  ITIFLGIKGLQSFIVNGVS----PIEFLTSINWNPTAENPQYGAFPFIFGSIAVTLLSAL 100

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKV 131
                    A             +L P+++++  IP + +    LT  V +  +      
Sbjct: 101 IAAPLGIAGAIFMTEIAPAWGRKILQPVIELLVGIPSVVYGFIGLTVLVPFIGHFKSSGS 160

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA    +    +  +T     ++ ++P+ L E S +   + WQ    + VP ++P 
Sbjct: 161 GHSVLAGTIVLSIMILPTVTSIATDAMGSLPKSLREGSYALGATRWQTIRRVLVPAALPT 220

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           L+  +++ M+  +   +A +M++     +P
Sbjct: 221 LMTAVVLGMARAFGEALAVQMVIGNTRNLP 250



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 14/158 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
           + + +++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 92  IAVTLLSALIAAPLGIAGAIFMTEIAPAWGRKILQPVIELLVGIPSVVYGFIGLTVLVPF 151

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       +         + P   +E + +   T W+  R 
Sbjct: 152 IGHFKSSGSGHSVLAGTIVLSIMILPTVTSIATDAMGSLPKSLREGSYALGATRWQTIRR 211

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +++P   P  +T  +     A+  ++  ++      +L
Sbjct: 212 VLVPAALPTLMTAVVLGMARAFGEALAVQMVIGNTRNL 249


>gi|296117922|ref|ZP_06836505.1| glycine betaine/carnitine/choline transport system permease
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295969153|gb|EFG82395.1| glycine betaine/carnitine/choline transport system permease
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 250

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 89/227 (39%), Gaps = 20/227 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N   ++   +++ I+ ++  GI   T   D  DI   TLD  S+        + ++ + V
Sbjct: 11  NRLLVIGIPILV-IVAVVGWGIWRATATLD--DIEARTLDPSSVLSLTWEHLVIVVISAV 67

Query: 78  ISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           I L+       +  +        ++  I +I Q+ P++G +    ++     P       
Sbjct: 68  IVLVTAIPLGIVLTRPATAFLSPIVTAIANIGQAAPVIGVIVLLAIWLGFGAP------- 120

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             AI A++      +  ++   L  + +DL E +R   LS  Q  + + +P ++P ++  
Sbjct: 121 -VAIAALWFYAFLPVLANVVAGLRGVDKDLVEAARGLSLSPMQVLFKVELPLALPVIMNG 179

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  ++      +V +       T I   G+G  I   I       ++
Sbjct: 180 VRTAL----VLLVGAGAFA---TFIDAGGLGGLITAGINLYRNPILI 219



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 71/217 (32%), Gaps = 10/217 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++      V+  V     W++   + +      D   V+ L    +  VV+  +I  +  
Sbjct: 14  LVIGIPILVIVAVVGWGIWRATATLDDIEARTLDPSSVLSLTWEHLVIVVISAVIVLVTA 73

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IP+GI        ++ + P    +A          V+  ++ +           + F   
Sbjct: 74  IPLGIV--LTRPATAFLSPIVTAIANIGQAAPVIGVIVLLAIWLGFGAPVAIAALWFYAF 131

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +L NV+AG      D  E A    ++  +    + LP   P  + G  TA      A 
Sbjct: 132 LPVLANVVAGLRGVDKDLVEAARGLSLSPMQVLFKVELPLALPVIMNGVRTALVLLVGAG 191

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             +         +   GLG  I         P ++ G
Sbjct: 192 AFA-------TFIDAGGLGGLITAGINLYRNPILISG 221


>gi|298527823|ref|ZP_07015227.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511475|gb|EFI35377.1| binding-protein-dependent transport systems inner membrane
           component [Desulfonatronospira thiodismutans ASO3-1]
          Length = 215

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 13/205 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + +Y       +L  ++ISL        + +   RL   ++ + +I+  IP +   
Sbjct: 10  NAGLVLEYTFNHLSLVLIVLLISLALWISTGLIISWHDRLAGTVISLSNILFCIPSISLF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +       PG  +G   A +  +  + +  +  S+Y  + ++   + +  +   ++ 
Sbjct: 70  GLFMT-----MPGFGLGRNTAVVVLVIYAMM-PLVRSVYLGVKSVDASVVDAGKGMGMTP 123

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    + +P + P +   M +S       +V    I    T I    +G  I   I   
Sbjct: 124 LQILLQIRIPMAWPMIFAGMRVS-------IVIVTGIATMATFIGEKNLGRLIHQGITRG 176

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D   I+   + +  +  L D ++ R
Sbjct: 177 DSDMIITGAIIVACMALLLDFIMAR 201



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 9/203 (4%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           + +FT  +   V+      +  V+++++I+  +WI  G+ I +   ++  +   + +L  
Sbjct: 3   IINFTLNNAGLVLEYTFNHLSLVLIVLLISLALWISTGLIISWHDRLAGTVISLSNILFC 62

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F L    +  + L  N  + +L+I+     ++ +V  G  +      +      
Sbjct: 63  IPSISLFGLF-MTMPGFGLGRNTAVVVLVIYAMM-PLVRSVYLGVKSVDASVVDAGKGMG 120

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           +T  +    I +P  +P    G   +       + ++      +       LG  I +  
Sbjct: 121 MTPLQILLQIRIPMAWPMIFAGMRVSIVIVTGIATMATFIGEKN-------LGRLIHQGI 173

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
            +G    ++ G +I+ C  L L+
Sbjct: 174 TRGDSDMIITGAIIVACMALLLD 196


>gi|120404121|ref|YP_953950.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119956939|gb|ABM13944.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
          Length = 264

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 91/258 (35%), Gaps = 12/258 (4%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRM- 72
           P +  L   ++    ++ L+    E      P D+V    +  D       A   + ++ 
Sbjct: 12  PPMALLAVVIVAWYAVSYLVLDSSEKFLLPPPHDVVAQGLLDADTRDDITSALWVSAKVA 71

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +  +V +++   V A   A+++ +   L P + ++Q++PIL  +     +F         
Sbjct: 72  IIGLVAAIVIGGVLAVAMAQAKWVERSLYPWVILLQTVPILAIVPVIGFWFGFEL----- 126

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               A +  +    ++ +  +  Q L    R L ++          +   L +P +MP +
Sbjct: 127 ---FARVLVVVIIALFPLIINPLQGLLGADRGLHDLFTLTGARPLTRLLKLQIPSAMPDV 183

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +           +       +     +  Y +     + L  +L A L  +   
Sbjct: 184 FVGLQSAAGLAVVGATVGDYFFGRGQIGLGMLLARYSSRLQSAEMLATVLTACLLGVVAF 243

Query: 253 FLYDQLLFRPMIVWSNKF 270
           +++  L  R +  WS  +
Sbjct: 244 WIFGALGRRIVGRWSPAW 261



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 60/178 (33%), Gaps = 8/178 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++ A +I   + + +     +   + P+  LL   P     P++     +       
Sbjct: 72  IIGLVAAIVIGGVLAVAMAQAKWVERSLYPWVILLQTVPILAIVPVIGFWFGFE----LF 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L+++    + ++ N + G         ++ +            + +P   P    G 
Sbjct: 128 ARVLVVVIIALFPLIINPLQGLLGADRGLHDLFTLTGARPLTRLLKLQIPSAMPDVFVGL 187

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            +A G A   + V +            GLG  +A  + +    E++  VL  C   + 
Sbjct: 188 QSAAGLAVVGATVGDYFFGRGQI----GLGMLLARYSSRLQSAEMLATVLTACLLGVV 241


>gi|329726469|gb|EGG62932.1| glycine betaine/carnitine/choline transport system permease protein
           opuCD [Staphylococcus epidermidis VCU144]
          Length = 231

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           +L+   L +   +  L  +  ++ + +         AK R L   ++ I +I+Q++P + 
Sbjct: 14  SLNWAFLLELFFKHLLMSVYGVLFACIIGIPIGIFIAKYRCLSWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +  +F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLAMGLG--------PTTVVVTVFLYSLLPIIKNTYTGIVEVDENIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +G Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TGNQILRMIELPLSLSVIIGGVRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTTFIL 187



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 4/108 (3%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A ++   PA     +++  +          + + +   +   I+ N   G      + K
Sbjct: 62  IANIIQTVPAIAMLAILMLAMGLGPTT----VVVTVFLYSLLPIIKNTYTGIVEVDENIK 117

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +      +TG +  R I LP      + G   A   A     +     
Sbjct: 118 DAGKGMGMTGNQILRMIELPLSLSVIIGGVRIALVVAIGIVAIGSFIG 165


>gi|326794656|ref|YP_004312476.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545420|gb|ADZ90640.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 301

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 9/186 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  ++  T    L   ++  L   + A     SR L   L+P +   Q+IPIL   
Sbjct: 93  SKRSLVYHSGITLSSTLLGFLLGALLGILLAIGIVHSRTLERSLMPWVITSQTIPILAIA 152

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +V    +    V+   + +++  F    + +T  M + L    +   E+  ++  S 
Sbjct: 153 PMIIVVLGAMNFTGVLPKAIISMYLSF----FPVTIGMVKGLRAPEKLHMELLATYSASS 208

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  L  P +MP L  ++ ++++      +  E+           G+GS +       
Sbjct: 209 EQVFRKLRWPSAMPYLFASLKIAIAASLVGAIVGEL-----PTGAQGGLGSRLLSGSYYG 263

Query: 237 DLLAIL 242
             + I 
Sbjct: 264 QTIQIW 269



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 54/146 (36%), Gaps = 5/146 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +   + P+       P     P+++  +   +    L  +++ ++ + + +   ++ 
Sbjct: 129 SRTLERSLMPWVITSQTIPILAIAPMIIVVLGAMNFTGVLPKAIISMYLSFFPVTIGMVK 188

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A      E+ +++  +  + +R +  P   PY       A   +   +IV E+ +  
Sbjct: 189 GLRAPEKLHMELLATYSASSEQVFRKLRWPSAMPYLFASLKIAIAASLVGAIVGELPTGA 248

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVV 556
                  GLG+ +   +  G   ++ 
Sbjct: 249 Q-----GGLGSRLLSGSYYGQTIQIW 269


>gi|323699485|ref|ZP_08111397.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio sp. ND132]
 gi|323459417|gb|EGB15282.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio desulfuricans ND132]
          Length = 310

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 7/207 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  L I +  ++ +G    +            L     P     T    L +M ++L   
Sbjct: 45  ALALFIIVGYMIYYGFPAISWDFLTTQPTEGGLAGGIFPCIVG-TFYLSLGSMALALPLG 103

Query: 84  FVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--YPGKVIGAELAA 138
              A      A       V+   ++ +  +P + F  F + +F+      G  +G  +A+
Sbjct: 104 VAAAIYLHEYAAPGPFMRVVRLCINNLAGVPSVVFGLFGMAFFVAGRDLGGLGMGVSIAS 163

Query: 139 IFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
                   +  +     + +L ++P    E S     + WQ  + + +P +MPG++   +
Sbjct: 164 GCMTLAVLILPVIIGTSEEALRSVPNTYREASLGLGATKWQTIFKVVLPSAMPGVLTGSI 223

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPG 224
           +S+S       A            LPG
Sbjct: 224 LSISRAAGETAAIMFTAAASYNPTLPG 250



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 79/230 (34%), Gaps = 15/230 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           +RF          S  R++  ++     ++ G  I   + +I +        +   +   
Sbjct: 22  LRFRRKATQEVWFSLFRIAVAINALALFIIVGYMIYYGFPAISWDFLTTQPTE-GGLAGG 80

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVF-- 433
               +     L + +  + +P+G+      H  +   PF ++       LA  P+ VF  
Sbjct: 81  IFPCIVGTFYLSLGSMALALPLGVAAAIYLHEYAAPGPFMRVVRLCINNLAGVPSVVFGL 140

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHI 488
           F +             + +S+     T   ++  VI G       + PN ++E +     
Sbjct: 141 FGMAFFVAGRDLGGLGMGVSIASGCMTLAVLILPVIIGTSEEALRSVPNTYREASLGLGA 200

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           T W+    ++LP   P  +TG+I +   A   +      +    +    G
Sbjct: 201 TKWQTIFKVVLPSAMPGVLTGSILSISRAAGETAAIMFTAAASYNPTLPG 250


>gi|311278888|ref|YP_003941119.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308748083|gb|ADO47835.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 245

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 75/242 (30%), Gaps = 18/242 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   + +   +   +                P+     S           +  +  I+LL
Sbjct: 8   LAWLLALFVFLVFAMPYSAPLFSALFPQLPRPLY-QQQSFWSLTLAHFWLVGVSSAIALL 66

Query: 82  FTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                  L  +   R    ++  I  + Q+ P +  L   V              +  AI
Sbjct: 67  VGVGAGILVTRDAGREFRTLVGTIAAMGQTFPPVAVLAIAVPVMG--------FGQEPAI 118

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    V  +       L ++P     V++   ++GWQ+   + +P + P ++  +  S
Sbjct: 119 IALILYGVLPILQGTLAGLVSVPAGAVAVAQGMGMNGWQRLTKVELPLAAPVIIAGVRTS 178

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +         +  +           +G+ I + +   +   ++   + +     + D+L 
Sbjct: 179 VIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVIQGAVLVALAAIVVDRLF 231

Query: 260 FR 261
            R
Sbjct: 232 ER 233



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 13/233 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   +  +V  +       S  +               L     + V V   IA ++ +
Sbjct: 10  WLLALFVFLVFAMPYSAPLFSALFPQLPRPLYQQQSFWSLTLAHFWLVGVSSAIALLVGV 69

Query: 403 PVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             GI +         + +   A +   FP      + V  + +      + L L  +   
Sbjct: 70  GAGILVTRDAGREFRTLVGTIAAMGQTFPPVAVLAIAVPVMGFGQEPAIIALILYGVL-- 127

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL   +AG  + P     VA    + GW+    + LP   P  + G  T+       
Sbjct: 128 --PILQGTLAGLVSVPAGAVAVAQGMGMNGWQRLTKVELPLAAPVIIAGVRTSVIINIGT 185

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + ++         +    LG  I       +   V+ G +++    + ++R  
Sbjct: 186 ATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGAVLVALAAIVVDRLF 231


>gi|311069099|ref|YP_003974022.1| phosphate ABC transporter [Bacillus atrophaeus 1942]
 gi|310869616|gb|ADP33091.1| phosphate ABC transporter [Bacillus atrophaeus 1942]
          Length = 294

 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 83/204 (40%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +LV     IL++G+ + +          I      +      +   +   M+I++ 
Sbjct: 20  IIAAILVGLFSYILINGVSQLSFDFISSKSSAIA-AGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+     +L   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVYMAEYAPQNKLTDFIRTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      ++ ++P+DL+E S +  +S W     + +P ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEDAVRSVPKDLKEASLALGVSRWHTVKTILLPSAIPSIITGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 19/147 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F    ++ I  +I IP+G+  G           ++  I+   ++L++ P+     +V+ 
Sbjct: 62  LFNSFYILFITMLITIPLGVGGGVYMAEYAPQNKLTDFIRTCIEVLSSLPS-----IVIG 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWR 492
                           +I G     +FN             + P D KE + +  ++ W 
Sbjct: 117 MFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVRVTEDAVRSVPKDLKEASLALGVSRWH 176

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN 519
             + I+LP   P  +TGAI A G  + 
Sbjct: 177 TVKTILLPSAIPSIITGAILASGRVFG 203


>gi|145594180|ref|YP_001158477.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145303517|gb|ABP54099.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 261

 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 17/230 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           I+ ++L G        D+ DI    LDV +L + A           ++ +        L 
Sbjct: 33  ILAVVLLGTYLWVSATDLDDIERRALDVDNLLRAAGEHVTLTALTTLLVVAIAGGGGILL 92

Query: 91  AKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            +   R L      + +I Q+ P +G L    ++    +          A+  +    V 
Sbjct: 93  TRPSMRWLTPFATGLANIGQATPAIGLLVLLSIFLGIGF--------STALICLVAYSVL 144

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    +  + R L E  R   +S       + +P ++P ++  +  +       +V
Sbjct: 145 PVLQNTIVGINQVDRHLIEAGRGIGMSPLTVLLRIELPLAVPVILAGVRTA-------IV 197

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +  +    T I   G+GS I   IK Q    ++   +    +    D L
Sbjct: 198 LAVGVATLATFINAGGLGSLIVTGIKLQRETILVTGAVLTATLALTLDWL 247



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 13/239 (5%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +     R    + +    V+ G  + ++   +  I       DV  ++      +    +
Sbjct: 19  RWRGLLRRHRTMPMILAVVLLGTYLWVSATDLDDIERRAL--DVDNLLRAAGEHVTLTAL 76

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF-PANVFFPLVVSCVSYYHLNPNLW 451
             ++   I    GI           + PFA  LA    A     L+V    +  +  +  
Sbjct: 77  TTLLVVAIAGGGGIL--LTRPSMRWLTPFATGLANIGQATPAIGLLVLLSIFLGIGFSTA 134

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L  L+ + +   +L N I G +       E      ++       I LP   P  + G  
Sbjct: 135 LICLVAY-SVLPVLQNTIVGINQVDRHLIEAGRGIGMSPLTVLLRIELPLAVPVILAGVR 193

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           TA   A   + ++   + G       GLG+ I    +      +V G ++     L L+
Sbjct: 194 TAIVLAVGVATLATFINAG-------GLGSLIVTGIKLQRETILVTGAVLTATLALTLD 245


>gi|148257283|ref|YP_001241868.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409456|gb|ABQ37962.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 325

 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 14/253 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
             R       L   +   V  +  +    +   + +G+   ++           +   + 
Sbjct: 62  WSRAEGLPPVLTRLAPAAVPLLFGLTLVFLWEVICVGLKVPTVLLPAPSLIMARLFASLP 121

Query: 382 LGCITMFRVVV-----LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           +      +  V       +I S     V +       +   + P    ++A P     P+
Sbjct: 122 VLGADFAQTFVRAAVPGWLIGSAAGFLVALACDRSDFLRRGLIPIGNFISALPIIGIAPI 181

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V    +   +     + +++  T + +L N +AG +A     +++  S+  +  +    
Sbjct: 182 LVMWFGFDWQSK----AAMVVVMTFFPMLVNAVAGLAAAGRLERDLMYSYGASWLQTLLA 237

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + LP   P+           A   +IV+E          T G+G  I+    + S   V 
Sbjct: 238 LRLPAAMPFLFNALKINASLALIGAIVAEFFG-----TPTLGMGFRISTEVGRMSLDMVW 292

Query: 557 LGVLIMCCFVLAL 569
             ++I      A 
Sbjct: 293 ATIVIAAIAGSAC 305



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 22/237 (9%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------DVHSLPQYASRTTLRMLS- 74
            A  L+ G+  + L  +    +    V +   +L        +  L    ++T +R    
Sbjct: 78  AAVPLLFGLTLVFLWEVICVGLKVPTVLLPAPSLIMARLFASLPVLGADFAQTFVRAAVP 137

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
             +I     F+ A    +S  L   L+PI + + ++PI+G     V++F   +  K    
Sbjct: 138 GWLIGSAAGFLVALACDRSDFLRRGLIPIGNFISALPIIGIAPILVMWFGFDWQSKAA-- 195

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +     + M  +    L    R   ++  S+  S  Q    L +P +MP L  
Sbjct: 196 ------MVVVMTFFPMLVNAVAGLAAAGRLERDLMYSYGASWLQTLLALRLPAAMPFLFN 249

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + ++ S      + +E         P  G+G  I+  +    L  +++A + +  +
Sbjct: 250 ALKINASLALIGAIVAEFFGT-----PTLGMGFRISTEVGRMSLD-MVWATIVIAAI 300


>gi|261247376|emb|CBG25201.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
          Length = 281

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 88  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 147

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 148 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 200 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 252

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 253 QGALLVALAAIIIDRLFER 271



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 87  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 144

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 145 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 200

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 201 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 253

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 254 GALLVALAAIIIDRLF 269


>gi|313765500|gb|EFS36864.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA1]
 gi|313772951|gb|EFS38917.1| ABC transporter, permease protein [Propionibacterium acnes
           HL074PA1]
 gi|313802525|gb|EFS43747.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA2]
 gi|313806540|gb|EFS45047.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA2]
 gi|313811087|gb|EFS48801.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA1]
 gi|313814411|gb|EFS52125.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA1]
 gi|313815098|gb|EFS52812.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA1]
 gi|313817407|gb|EFS55121.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA2]
 gi|313821850|gb|EFS59564.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA1]
 gi|313824256|gb|EFS61970.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA2]
 gi|313826620|gb|EFS64334.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA1]
 gi|313828621|gb|EFS66335.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA2]
 gi|313831853|gb|EFS69567.1| ABC transporter, permease protein [Propionibacterium acnes
           HL007PA1]
 gi|313834605|gb|EFS72319.1| ABC transporter, permease protein [Propionibacterium acnes
           HL056PA1]
 gi|313840164|gb|EFS77878.1| ABC transporter, permease protein [Propionibacterium acnes
           HL086PA1]
 gi|314915858|gb|EFS79689.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA4]
 gi|314917134|gb|EFS80965.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA1]
 gi|314921409|gb|EFS85240.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA3]
 gi|314926664|gb|EFS90495.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA3]
 gi|314931268|gb|EFS95099.1| ABC transporter, permease protein [Propionibacterium acnes
           HL067PA1]
 gi|314954908|gb|EFS99314.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA1]
 gi|314958841|gb|EFT02943.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA1]
 gi|314961132|gb|EFT05233.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA2]
 gi|314964442|gb|EFT08542.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA1]
 gi|314974606|gb|EFT18701.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA1]
 gi|314977201|gb|EFT21296.1| ABC transporter, permease protein [Propionibacterium acnes
           HL045PA1]
 gi|314980387|gb|EFT24481.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA2]
 gi|314985701|gb|EFT29793.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA1]
 gi|314987226|gb|EFT31317.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA2]
 gi|314988883|gb|EFT32974.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA3]
 gi|315078545|gb|EFT50576.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA2]
 gi|315081991|gb|EFT53967.1| ABC transporter, permease protein [Propionibacterium acnes
           HL078PA1]
 gi|315082512|gb|EFT54488.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA2]
 gi|315086224|gb|EFT58200.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA3]
 gi|315087807|gb|EFT59783.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA1]
 gi|315097442|gb|EFT69418.1| ABC transporter, permease protein [Propionibacterium acnes
           HL038PA1]
 gi|315099891|gb|EFT71867.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA2]
 gi|315101799|gb|EFT73775.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA1]
 gi|315106450|gb|EFT78426.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA1]
 gi|315110244|gb|EFT82220.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA2]
 gi|327331473|gb|EGE73212.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL096PA2]
 gi|327333460|gb|EGE75180.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL096PA3]
 gi|327334986|gb|EGE76697.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL097PA1]
 gi|327445517|gb|EGE92171.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA2]
 gi|327447137|gb|EGE93791.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA1]
 gi|327449828|gb|EGE96482.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA2]
 gi|327454676|gb|EGF01331.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA3]
 gi|327456750|gb|EGF03405.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA2]
 gi|328755732|gb|EGF69348.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA1]
 gi|328756512|gb|EGF70128.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA2]
 gi|328758760|gb|EGF72376.1| ABC transporter, permease protein [Propionibacterium acnes
           HL020PA1]
 gi|328761816|gb|EGF75329.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL099PA1]
          Length = 238

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 80/211 (37%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + IA+I  IP G+ IG      +     +
Sbjct: 14  ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKTIAVACS 73

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 74  GALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAIDDEVADG 133

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 134 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 186

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 187 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 68/224 (30%), Gaps = 17/224 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ I+ +           + R   
Sbjct: 8   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT 67

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMY 155
           + V     +++         ++     L     IG E   +     +    +  +    Y
Sbjct: 68  IAVACSGALRA-------LPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSY 120

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +
Sbjct: 121 SGVDAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGM 180

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G       G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 181 G-------GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217


>gi|308190276|ref|YP_003923207.1| spermidine/putrescine ABC transporter permease protein [Mycoplasma
           fermentans JER]
 gi|307625018|gb|ADN69323.1| spermidine/putrescine ABC transporter permease protein [Mycoplasma
           fermentans JER]
          Length = 279

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +     R+    L + ++ L+  F YA   A ++   + +  +  I+  + I   
Sbjct: 53  LAEKGIWLIIWRSLKIGLISAILCLIIAFPYAYFIATTKSKYLAIYALSLILSPMIIFTI 112

Query: 116 LTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                +  +F++++    + AE   +F +    +  M   +Y    ++P+++ E S    
Sbjct: 113 AKIYAIRGFFLSIFEEDSLNAEWFMVFGLTYLNLPYMIMPLYTVFKDMPKNILEASADLG 172

Query: 174 LSGWQKFWYLGVPFSMPGLVWN-MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            + +Q  + + VP+S   ++    M+ +S    FV++++++  G  +     IGS I   
Sbjct: 173 YNKFQTLFKVVVPYSFKAILSGFSMIFLSSATTFVISAKLLPNGTQLQT---IGSVINDY 229

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
               +   +      +L V  ++
Sbjct: 230 SSPSNKYELALGSTLVLVVSAIF 252



 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   ++  I+  II  P   +I         I   + +L+     +F    +  +  + 
Sbjct: 65  SLKIGLISAILCLIIAFPYAYFIATTKSKYLAIYALSLILSPM--IIFTIAKIYAIRGFF 122

Query: 446 LN----PNLWLSLLMIFGTQW----YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           L+     +L     M+FG  +    Y++  +       P +  E ++      ++    +
Sbjct: 123 LSIFEEDSLNAEWFMVFGLTYLNLPYMIMPLYTVFKDMPKNILEASADLGYNKFQTLFKV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P  F   ++G       +    ++S         L+T  +G+ I + +   +  E+ L
Sbjct: 183 VVPYSFKAILSGFSMIFLSSATTFVISAKLLPNGTQLQT--IGSVINDYSSPSNKYELAL 240

Query: 558 G---VLIMCCFVLALNRFL 573
           G   VL++    +     +
Sbjct: 241 GSTLVLVVSAIFIGCYGLI 259


>gi|126730382|ref|ZP_01746193.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
 gi|126709115|gb|EBA08170.1| binding-protein-dependent transport systems inner membrane
           component [Sagittula stellata E-37]
          Length = 570

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +L ++        +     +I  +L  I A+    +  M   MY  +  IP      ++S
Sbjct: 417 VLVWIGLV----ADDNRLVMINNQLGTIIAMTHILLPFMILPMYSVMATIPPTYVRAAKS 472

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              + W  FW +  P S+PG+    ++       + +  E++            G++I+ 
Sbjct: 473 LGATNWTTFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTT--------GTFISN 524

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            I      ++ + +   LG I L   L+ 
Sbjct: 525 RIAYHISSSLNWGLAAALGTILLAVVLIL 553



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 45/139 (32%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N  L   + M      +++  + +  +  P  +   A S   T 
Sbjct: 418 LVWIGLVADDNRLVMINNQLGTIIAMTHILLPFMILPMYSVMATIPPTYVRAAKSLGATN 477

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 478 WTTFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 537

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ +
Sbjct: 538 ----LAAALGTILLAVVLI 552


>gi|269968441|ref|ZP_06182456.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269826940|gb|EEZ81259.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 244

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 55/144 (38%), Gaps = 12/144 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ---SIPILGFLT 117
           +     +    +L +  +++L       L ++  R   V    + ++    +IP L  L 
Sbjct: 40  IVYLTVQHIELVLLSGGLAILIAIPVGVLLSR-PRFQKVAESAMQVLNVGTTIPTLAILA 98

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             + A+F +  + +  +  + Y  L  +P  L+E +    ++  
Sbjct: 99  LAMSFLGIG--------TVPAVFGLTIASLLPIVRNTYIGLKEVPAHLKEAASGIGMTEL 150

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           Q  + + +P ++  +   +  +++
Sbjct: 151 QMLFQVEIPNALFVIFAGIRTALA 174



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            ++  + C  A+GI  Q  G I +   YQ+   +++L    +  V++   +A +I IPVG
Sbjct: 9   YYFVLLACVFALGIYLQGAGTIDDFLYYQE--DIVYLTVQHIELVLLSGGLAILIAIPVG 66

Query: 406 IWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           + +  RP      +   Q+L      P      L +S +    +     L++     +  
Sbjct: 67  VLL-SRPRFQKVAESAMQVLNVGTTIPTLAILALAMSFLGIGTVPAVFGLTI----ASLL 121

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            I+ N   G    P   KE AS   +T  +    + +P        G  TA 
Sbjct: 122 PIVRNTYIGLKEVPAHLKEAASGIGMTELQMLFQVEIPNALFVIFAGIRTAL 173


>gi|289578525|ref|YP_003477152.1| binding-protein-dependent transporters inner membrane component
           [Thermoanaerobacter italicus Ab9]
 gi|289528238|gb|ADD02590.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter italicus Ab9]
          Length = 217

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   ++ +  I+ +F      L           +  L  +L  I++
Sbjct: 1   MSETINLLLVGTWQTIYMVVVSTFIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F  +  GK IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRVLVGKAIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E +++   S  Q    + VP ++P +   + ++
Sbjct: 119 IEAAKAMGASPLQIITKVLVPEALPSIAAGITIT 152



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV   IA+I  +P+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVVSTFIATIFGVPLGVLLMVTDKDQILHNEPLNKILGTIVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  ++  +   I F                 E A +   +  +  
Sbjct: 74  LIPFTRVLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGVIEAAKAMGASPLQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TKVLVPEALPSIAAGITIT 152


>gi|120406540|ref|YP_956369.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
 gi|119959358|gb|ABM16363.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium vanbaalenii PYR-1]
          Length = 264

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L           + A+  S +       L   + R   V+V  ++ ++++P      
Sbjct: 20  PAGLSARILEHLQYTVIAVFFSAVIAVPLGMLIGHTGRGTFVVVTGVNALRALP------ 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L         +    A+    +  +    Y  + N+ RD+ + +R+  ++  
Sbjct: 74  --TLGVLLLGVLLWGLGLIPPTVALMLLGIPPLLAGTYSGIANVDRDVVDAARAMGMTES 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    +  P +MP ++  +  +        +             L G+G Y+   IK ++
Sbjct: 132 RILLRVETPIAMPLILGGLRTA-------TLQIVATATVAAYASLGGLGRYLIDGIKVRE 184

Query: 238 LLAILYAMLTM 248
               L   L +
Sbjct: 185 FYLALVGALMV 195



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 11/202 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +++ +I     +     +       +   V+ +  +++I +P+G+ IG     +  +   
Sbjct: 6   EALSFIFTAANWGGPAGLSARILEHLQYTVIAVFFSAVIAVPLGMLIGHTGRGTFVVVTG 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V       + P + L LL I      +L    +G +    D  +
Sbjct: 66  VNALRALPTLGVLLLGVLLWGLGLIPPTVALMLLGI----PPLLAGTYSGIANVDRDVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  R    +  P   P  + G  TA       ++     +    +    GLG 
Sbjct: 122 AARAMGMTESRILLRVETPIAMPLILGGLRTA-------TLQIVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMC 563
           Y+ +  +   F   ++G L++ 
Sbjct: 175 YLIDGIKVREFYLALVGALMVT 196


>gi|322832922|ref|YP_004212949.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168123|gb|ADW73822.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 576

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 95/588 (16%), Positives = 185/588 (31%), Gaps = 75/588 (12%)

Query: 12  SRRIFPN--IFDLLAFVLVIGIINI--LLHGIQETTVPRDIVDIVPIT--LDVHSLPQYA 65
           SRR +P      L A  L+IGI++I  L+  +     P  + DI  ++  L    +    
Sbjct: 14  SRRFWPGSEKGVLWALTLLIGILSIAPLMRLVWAAMAPEGVPDISRLSHLLGTRKVLTAT 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-----------VLVPILDIMQSIPILG 114
             T    + + +++++   V A L A +   G            ++ P +  +  +  L 
Sbjct: 74  LNTLTIAVVSTLLAMVLGTVAALLIALTNLRGKQAWVFTFILPLMIPPQVTALAWVQALS 133

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN---MTFSMYQSLCNIPRDLEEVSRS 171
             +  + +     P        +    I    + N   +   +   L  +P +L E +RS
Sbjct: 134 PSSPVLQWLGLTLPAGSTSPLYSLTGIIVLLGLHNAPLVFLMVRAGLRRLPAELVEAARS 193

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
                W+  + + +P   P +     +S            M+ +   +  L  +      
Sbjct: 194 GGAQPWRVLFTVILPLVRPAIFAGAALSFVTAAGNFGIQAMLGIPGRIPTLITLVYQQLN 253

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291
           ++    L     A+L++L        L+F   +      R+  T                
Sbjct: 254 SVGASALTD--MAVLSLLIAAITLAGLMFSRWLGGRQDVRVTGTP--------------- 296

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
                                 + L ++LG  R           S   +  +  +    +
Sbjct: 297 ----------------------RALHQSLGRWRLPAEIAAWLWMSLTLLLPLSALMTTSL 334

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
             G    +  QS+              +      ++   V+  +I ++  + +  ++ ++
Sbjct: 335 TTGFGQALTLQSLTLSNYANALFGYPAIRHAFMTSLGLTVMTALILTLSSLFLAYFLSWQ 394

Query: 412 P-HISSKIQPFAQLLAAFP-------ANVFF--PLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
              +   +Q   +L  A P       A +FF  PL +  +S Y     +  + L  F   
Sbjct: 395 RTRLVRILQLSTELAYALPGIVTGIAAILFFLKPLPLVHISLYGTVWIILAAYLSSFMAL 454

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +L   +AG +       E A  F     +  R I++P   P  + G I     A N  
Sbjct: 455 --VLRPTLAGFAQIERSLDEAAQIFGAGFLQRMRDIVMPLAAPSAMAGTILVFLTALNEI 512

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            VS +            LG  I    E GS         +M   VL  
Sbjct: 513 QVSILLVTSGTQT----LGPMIVFLDEGGSSTLAAAVGCLMIGVVLIF 556



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 81/268 (30%), Gaps = 23/268 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY-----IVNHFTYQDVLY 378
           R   P       S + V + L +    +     + + W ++       I           
Sbjct: 9   RCTIPSRRFWPGSEKGVLWALTLLIGILSIAPLMRLVWAAMAPEGVPDISRLSHLLGTRK 68

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI------GFRPHISSKIQPF----------- 421
           V+     T+   VV  ++A ++     + I      G +  + + I P            
Sbjct: 69  VLTATLNTLTIAVVSTLLAMVLGTVAALLIALTNLRGKQAWVFTFILPLMIPPQVTALAW 128

Query: 422 AQLLAAFPANV-FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            Q L+     + +  L +   S   L     + +L+       +   V AG    P +  
Sbjct: 129 VQALSPSSPVLQWLGLTLPAGSTSPLYSLTGIIVLLGLHNAPLVFLMVRAGLRRLPAELV 188

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A S     WR    +ILP + P    GA  +   A     +  +            L 
Sbjct: 189 EAARSGGAQPWRVLFTVILPLVRPAIFAGAALSFVTAAGNFGIQAMLGIPGRIPTLITLV 248

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLA 568
                S    +  ++ +  L++    LA
Sbjct: 249 YQQLNSVGASALTDMAVLSLLIAAITLA 276



 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 77/197 (39%), Gaps = 4/197 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP- 128
           L +++A++++L   F+   L+ +  RL  +L    ++  ++P +      +++F+   P 
Sbjct: 372 LTVMTALILTLSSLFLAYFLSWQRTRLVRILQLSTELAYALPGIVTGIAAILFFLKPLPL 431

Query: 129 -GKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +   +  I A + S    +           I R L+E ++ F     Q+   + +P
Sbjct: 432 VHISLYGTVWIILAAYLSSFMALVLRPTLAGFAQIERSLDEAAQIFGAGFLQRMRDIVMP 491

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P  +   ++        +  S ++V   T    P I  ++          A+   M+
Sbjct: 492 LAAPSAMAGTILVFLTALNEIQVSILLVTSGTQTLGPMI-VFLDEGGSSTLAAAVGCLMI 550

Query: 247 TMLGVIFLYDQLLFRPM 263
            ++ +  L   L  R +
Sbjct: 551 GVVLIFMLLASLFARRL 567


>gi|242280828|ref|YP_002992957.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123722|gb|ACS81418.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 593

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 57/427 (13%), Positives = 136/427 (31%), Gaps = 42/427 (9%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+A   +       M   +   + +IP+ L E + S  L+ +Q    + +P +   ++  
Sbjct: 140 LSATVGLGIYTSSFMAEVIRAGIQSIPKGLLEAAYSSGLTPFQTLTKIILPLAFRAIIPP 199

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +             + ++ V +       I        +      ++Y  L++     L 
Sbjct: 200 LGSEFLNNMKNSSLAMVVGVPEICWASQQIEGMTFKGFEATTAATVIYLSLSLTIAGILT 259

Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315
                  ++ W    +L+           V        F   + +     F+ ++   ++
Sbjct: 260 -------LVNW----KLQIVP--------VKDRTLGHKFAHMLFWPFEAPFAFIAKMHRR 300

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN------ 369
           + R              +     ++S +L + W          +   ++  +        
Sbjct: 301 IKRRRQDDFSLSSAQAARKAFIAKLSKVLGLIWKGTFLACLGFLVVSALYGVSKFNFEVI 360

Query: 370 ----------HFTYQDVLYVIW-LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
                      F   D   ++W LG ++   ++ +I I+   +I + + IG        +
Sbjct: 361 RENIGTMLWWRFPEGDPNEILWGLGGLSFSIIMSVIAISVSFFIGLIVGIGRTSKNKLFL 420

Query: 419 QP---FAQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            P   + +L+   P      +    +  ++   LN     ++ +   T  Y+   V +G 
Sbjct: 421 IPSTLYIELIRGNPLIMVIFWIYFFIPILTGQFLNVFWSATIALTVFTGAYLAEIVRSGI 480

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P    E A S  +T W+  R +ILP      +   +      +  + ++ V     +
Sbjct: 481 QNLPPGQFEAAVSTGLTYWQAMRKVILPQALKQMLPAIVGQFIAIFKDTSLAFVIGVLEL 540

Query: 533 HLRTTGL 539
                GL
Sbjct: 541 TFVAQGL 547



 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSIPILGFLTFTVV 121
            S + +  + A+ +S     +      ++ +  + L+P    +++++  P L  + F + 
Sbjct: 387 LSFSIIMSVIAISVSFFIGLIVGI--GRTSKNKLFLIPSTLYIELIRGNP-LIMVIFWIY 443

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+ +  G+ +    +A  A+       +   +   + N+P    E + S  L+ WQ   
Sbjct: 444 FFIPILTGQFLNVFWSATIALTVFTGAYLAEIVRSGIQNLPPGQFEAAVSTGLTYWQAMR 503

Query: 182 YLGVPFSM 189
            + +P ++
Sbjct: 504 KVILPQAL 511


>gi|291437694|ref|ZP_06577084.1| glycine betaine/L-proline ABC transporter [Streptomyces ghanaensis
           ATCC 14672]
 gi|291340589|gb|EFE67545.1| glycine betaine/L-proline ABC transporter [Streptomyces ghanaensis
           ATCC 14672]
          Length = 305

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 9/157 (5%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           V+ ++  L   I         V  +   + V  +   +  T  ++L+A+ ++L+  F   
Sbjct: 79  VLLLVATLAWLIGTWRTALTAVLAMA-AIGVLGVWNPSLDTLSQVLAAVAVTLVVGFATG 137

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             AA+S R+  +L P+LD+ Q++P   +L   V  F       V  A + A+ A+     
Sbjct: 138 IAAARSDRVDRLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAVVYALPAVVRI-- 195

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   Q L  +     E +RS   +G Q+   + 
Sbjct: 196 ------TAQGLRQVDPAALESARSLGATGAQQLRQVQ 226



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 61/224 (27%), Gaps = 13/224 (5%)

Query: 275 TTGIYPADSWVLYLFRK-TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333
           T  +   D WV+ L       + ++    ++    +        R    +     +    
Sbjct: 14  TARLEWPDGWVVSLVEPVNRAVGWMTDHLYSGVPVIGGTADWAARFTTWVLDPIRDGLQW 73

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L     +  +  + W            W++    V       VL V      T+ +V+  
Sbjct: 74  LPWWSVLLLVATLAWLI--------GTWRTALTAVLAMAAIGVLGVWNPSLDTLSQVLAA 125

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           + +  ++    GI       +   ++P   +    P  V+   VV+              
Sbjct: 126 VAVTLVVGFATGIAAARSDRVDRLLRPVLDVFQTMPQFVYLIPVVALFGVGRAPAVAAAV 185

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +             G         E A S   TG +  R +
Sbjct: 186 VYALPAVVRI----TAQGLRQVDPAALESARSLGATGAQQLRQV 225


>gi|20808057|ref|NP_623228.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|254478769|ref|ZP_05092137.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium
           pacificum DSM 12653]
 gi|20516637|gb|AAM24832.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|214035281|gb|EEB75987.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium
           pacificum DSM 12653]
          Length = 297

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 79/169 (46%), Gaps = 6/169 (3%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL-- 113
           V +LP       + +  A++IS       A        +    +L P ++I   IP +  
Sbjct: 71  VGALPFIVGSVLVSIF-AILISAPLGVSSAIFMVEISKKMGQKILQPAIEIFVGIPSVVY 129

Query: 114 GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           G+L  +V+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S + 
Sbjct: 130 GWLGLSVLVPFISKHFGGLGFSLLAGILVLAIMTLPTITSVSADTIRSLPVEIREASYAL 189

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             + WQ   ++ +P + PG++  +++ ++  +   +A +M++    VIP
Sbjct: 190 GATRWQTIRHVLIPAAKPGILTAIILGLARAFGEALAVQMVIGNRPVIP 238



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 64/160 (40%), Gaps = 13/160 (8%)

Query: 391 VVLIIIASIIWIPVGIWIG------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
           V++ I A +I  P+G+          +      +QP  ++    P+ V+  L +S +   
Sbjct: 81  VLVSIFAILISAPLGVSSAIFMVEISKKMGQKILQPAIEIFVGIPSVVYGWLGLSVLVPF 140

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +  L  +L   +L++       + +V      + P + +E + +   T W+  R++
Sbjct: 141 ISKHFGGLGFSLLAGILVLAIMTLPTITSVSADTIRSLPVEIREASYALGATRWQTIRHV 200

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++P   P  +T  I     A+  ++  ++       +  +
Sbjct: 201 LIPAAKPGILTAIILGLARAFGEALAVQMVIGNRPVIPKS 240


>gi|302521542|ref|ZP_07273884.1| permease membrane component [Streptomyces sp. SPB78]
 gi|318057199|ref|ZP_07975922.1| permease membrane protein [Streptomyces sp. SA3_actG]
 gi|318079194|ref|ZP_07986526.1| permease membrane protein [Streptomyces sp. SA3_actF]
 gi|302430437|gb|EFL02253.1| permease membrane component [Streptomyces sp. SPB78]
          Length = 215

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 15/200 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L   A +    +   MVI+ +   +    + +S   G +       + ++P L  +   
Sbjct: 13  QLLSDAYQHASAVFQCMVIATVIGVLIGVFSYRSEWAGNLATTATSTILTVPSLALIGLL 72

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V                  + ++    +  +  +    L  +   L + ++   +S   +
Sbjct: 73  VPIVGLGV--------APTVISLVLYGLLPIVRNAIVGLRGVDATLVDAAKGIGMSRTAR 124

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + +S +     + A      G      PG+G+ I   I      
Sbjct: 125 LLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGIASLGSK 177

Query: 240 AILYAMLTMLGVIFLYDQLL 259
             L  +L     I +   L 
Sbjct: 178 NALNQVLAGTVGIVILALLF 197



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA++I + +G++        +        +   P+     L+V  V        
Sbjct: 25  VFQCMVIATVIGVLIGVFSYRSEWAGNLATTATSTILTVPSLALIGLLVPIVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 85  ISLVLYGLL----PIVRNAIVGLRGVDATLVDAAKGIGMSRTARLLRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +      +   IA    K +  +V+ G + +    L  
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSKNALNQVLAGTVGIVILALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|254229370|ref|ZP_04922786.1| ABC-type proline/glycine betaine transport systems, permease
           component [Vibrio sp. Ex25]
 gi|262396826|ref|YP_003288679.1| putative ABC transporter permease [Vibrio sp. Ex25]
 gi|151938061|gb|EDN56903.1| ABC-type proline/glycine betaine transport systems, permease
           component [Vibrio sp. Ex25]
 gi|262340420|gb|ACY54214.1| putative ABC transporter permease [Vibrio sp. Ex25]
          Length = 244

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 55/144 (38%), Gaps = 12/144 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ---SIPILGFLT 117
           +     +    +L +  +++L       L ++  R   V    + ++    +IP L  L 
Sbjct: 40  IVYLTVQHIELVLLSGGLAILIAIPVGVLLSR-PRFQKVAESAMQVLNVGTTIPTLAILA 98

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             + A+F +  + +  +  + Y  L  +P  L+E +    ++  
Sbjct: 99  LAMSFLGIG--------TVPAVFGLTIASLLPIVRNTYIGLKEVPAHLKEAASGIGMTEL 150

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           Q  + + +P ++  +   +  +++
Sbjct: 151 QMLFQVEIPNALFVIFAGIRTALA 174



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            ++  + C  A+GI  Q  G I +   YQ+   +++L    +  V++   +A +I IPVG
Sbjct: 9   YYFVLLACVFALGIYLQGAGTIDDFLYYQE--DIVYLTVQHIELVLLSGGLAILIAIPVG 66

Query: 406 IWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           + +  RP      +   Q+L      P      L +S +    +     L++     +  
Sbjct: 67  VLL-SRPRFQKVAESAMQVLNVGTTIPTLAILALAMSFLGIGTVPAVFGLTI----ASLL 121

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            I+ N   G    P   KE AS   +T  +    + +P        G  TA 
Sbjct: 122 PIVRNTYIGLKEVPAHLKEAASGIGMTELQMLFQVEIPNALFVIFAGIRTAL 173


>gi|260425446|ref|ZP_05779426.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260423386|gb|EEX16636.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 547

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 47/222 (21%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF------ 118
           RT    +      +L  +  A + +   SR   ++++           L  L F      
Sbjct: 329 RTLFMSMVITFSCILLGYPVAYILSNLPSRTANLLMI-----------LVLLPFWTSLLV 377

Query: 119 -----------------TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSL 158
                             +V+   +  G    +I  +   I A+    +  M   MY  +
Sbjct: 378 RTSAWKVMLQQQGVINDVLVWIGLVSDGDRLVMINNQFGTIVAMTHILLPFMILPMYSVM 437

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             IP      ++S   + W  FW +  P S+PG+    ++       + +  E++     
Sbjct: 438 STIPPSYVRAAKSLGATNWTTFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTT- 496

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                  G++I+  I      ++ + +   LG I L   LL 
Sbjct: 497 -------GTFISNRIAYHISSSLNWGLAAALGTILLAVVLLL 531



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +  S  P  +   A S   T 
Sbjct: 396 LVWIGLVSDGDRLVMINNQFGTIVAMTHILLPFMILPMYSVMSTIPPSYVRAAKSLGATN 455

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S   G
Sbjct: 456 WTTFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 515

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ L
Sbjct: 516 ----LAAALGTILLAVVLL 530


>gi|126433924|ref|YP_001069615.1| phosphonate ABC transporter, inner membrane subunit [Mycobacterium
           sp. JLS]
 gi|126233724|gb|ABN97124.1| phosphonate ABC transporter, inner membrane subunit [Mycobacterium
           sp. JLS]
          Length = 533

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 78/524 (14%), Positives = 161/524 (30%), Gaps = 81/524 (15%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPI 112
           D   +   A  T L  +   +++ + +   A +AA++      +  V   ++   +++P 
Sbjct: 74  DPGRIGGLAVETLLMAVLGTILAAVASVPLAFMAARNTTPHPAVHAVARAVITFCRAMPD 133

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L F    V++   L  G + G     I A+    +  +      ++        E  RS 
Sbjct: 134 LLF---AVLFVRALGIGVLPG-----ILALALHSIGMLGKLFADAIEQSDAGPREAVRST 185

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            +  +++     +P  +P  +   +  +       V    +  G       GIG  +  A
Sbjct: 186 GVGYFREMINAVLPQVVPSWIGTFVYRIDINLRMSVVLGFVGAG-------GIGFALQDA 238

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
           ++       L  +L +L +I                                V+ +  + 
Sbjct: 239 LRGLVYPRALGIVLVILVIIAAM----------------------------EVVSIGVRR 270

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             L            P  +  ++      ++        +      R+S    + W    
Sbjct: 271 VLLD-----------PSMSRPRRDRAARILLAGAVIATGIAALIELRISPWALVTW---- 315

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR- 411
               +G + +  G +           ++     T+   VV   I  ++ IPVG+      
Sbjct: 316 ----VGPSIEVFGRMFPPNFGAMGAGLVDAAVQTVAIGVVSTAIGVVLSIPVGLLAARNV 371

Query: 412 ---PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
              P      + +  L+ + P  +   L V  V+   L P      L + G+  ++   V
Sbjct: 372 TPHPWCHWAARGWILLVRSVPELI---LAVVFVAALGLGPVAGTCALAV-GSVGFLAKLV 427

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                       E   S     W+     ++P   P  V       G +     V+   S
Sbjct: 428 ADAVEEIDPGPMEAVRSVGGGWWKTLFAAVIPQSMPALV-------GSSLYMLDVNVRTS 480

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +   G+G  + ES    +F      VL++   V A+ R 
Sbjct: 481 TILGIVGAGGIGYLLFESIRTLNFDVAGAIVLVIFVVVYAIERL 524



 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 78/250 (31%), Gaps = 19/250 (7%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
            P   + + +            F     +       ++   +      D   +  L   T
Sbjct: 26  LPGQLVAVGALIATLAAAWYIDFAPAALIDGFDEVAALVERMLPPRLDDPGRIGGLAVET 85

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           +   V+  I+A++  +P+           P + +  +       A P  +F  L V  + 
Sbjct: 86  LLMAVLGTILAAVASVPLAFMAARNTTPHPAVHAVARAVITFCRAMPDLLFAVLFVRALG 145

Query: 443 YYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
              L   L L+L  + + G  +                 +E   S  +  +R     +LP
Sbjct: 146 IGVLPGILALALHSIGMLGKLF------ADAIEQSDAGPREAVRSTGVGYFREMINAVLP 199

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
            + P ++   +         S+V      G       G+G  + ++     +P  +  VL
Sbjct: 200 QVVPSWIGTFVYRIDINLRMSVVLGFVGAG-------GIGFALQDALRGLVYPRALGIVL 252

Query: 561 IMCCFVLALN 570
           ++   + A+ 
Sbjct: 253 VILVIIAAME 262


>gi|150376772|ref|YP_001313368.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031319|gb|ABR63435.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 399

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              A R     L ++  + +       L  +  RL   ++ +L+ +Q+IP +      + 
Sbjct: 184 WAEAGRHVTLALGSLAAATVVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243

Query: 122 ---YFMNLYPGKVI-----GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
              +     PG             A  A+F   +  +  +    L  +PR   + +R   
Sbjct: 244 PLGWIAANIPGASAVGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGIG 303

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   +  P + P ++  + +
Sbjct: 304 MTDRQRLVTIEFPLAFPVILTGIRI 328



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 12/136 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP-- 448
           +  +  A+++ +P+GI       + + +      +   P+   F ++++ + +   N   
Sbjct: 195 LGSLAAATVVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIAANIPG 254

Query: 449 ----------NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                          + +   +   ++ N + G +  P    + A    +T  +    I 
Sbjct: 255 ASAVGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGIGMTDRQRLVTIE 314

Query: 499 LPGIFPYYVTGAITAC 514
            P  FP  +TG     
Sbjct: 315 FPLAFPVILTGIRIVL 330


>gi|27378425|ref|NP_769954.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351573|dbj|BAC48579.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 252

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +I     T+   +V   +  +I I + + I   P + S I P A  + + P   
Sbjct: 51  WSKRATLIDAAGYTLLEALVGYGLGCLIGIGLAVAIALVPALRSAILPLATAINSVPVVG 110

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           + PL++        +      +++     + IL +++AG         ++  SF  + + 
Sbjct: 111 YSPLILLWFGIGVSSK----IVMVAMAVSFTILLSMLAGLDRVDRRAVDLMKSFGASRFG 166

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P  + G   +   +   +IV+E+           GLG  I ++  +  F
Sbjct: 167 VLWRLRLPTALPLLLAGMRVSTVRSVIVAIVTEMLGAHG------GLGWVIYQAVLQIDF 220

Query: 553 PEVVLGVLIMCCFVLAL 569
            +V   +++     LA 
Sbjct: 221 VQVWAAIVVASAASLAF 237



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 14/201 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L   A  T L  L    +  L     A   A    L   ++P+   + S+P++G+   
Sbjct: 55  ATLIDAAGYTLLEALVGYGLGCLIGIGLAVAIALVPALRSAILPLATAINSVPVVGYSPL 114

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++F      K++   +A  F I          SM   L  + R   ++ +SF  S + 
Sbjct: 115 ILLWFGIGVSSKIVMVAMAVSFTI--------LLSMLAGLDRVDRRAVDLMKSFGASRFG 166

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W L +P ++P L+  M +S        + +EM+          G+G  I  A+ + D 
Sbjct: 167 VLWRLRLPTALPLLLAGMRVSTVRSVIVAIVTEMLG------AHGGLGWVIYQAVLQIDF 220

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
           + +  A++        +  L+
Sbjct: 221 VQVWAAIVVASAASLAFFGLI 241


>gi|134299951|ref|YP_001113447.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum reducens MI-1]
 gi|134052651|gb|ABO50622.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Desulfotomaculum reducens MI-1]
          Length = 283

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 93/247 (37%), Gaps = 15/247 (6%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F+   G   +  +GI       D   +         +      T   ++  + +S+    
Sbjct: 30  FIFADGFPVMSKYGIAHFITGTDWHPLDSKFGLFPMIVGSFMVTIGALIIGVPLSVGCAI 89

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIF 140
             A +A   +++  ++ P ++++  IP + +    L   V +   ++ G+       ++ 
Sbjct: 90  FLAEIA--PKQMTRIVRPAIELLAGIPSVVYGFYGLVILVPFIREIFGGRGFSIIGGSVV 147

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                    +  S   ++ ++P++ +E S +   + WQ    + VP +  G++  +++ M
Sbjct: 148 LAIMILPTIVNISE-DAIRSVPKEYKEGSLALGATHWQTIKKVIVPSASSGILTGVVLGM 206

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGI-------GS-YIALAIKEQDLLAILYAMLTMLGVI 252
                  +A  M+V     IP   +       G+  I +     +    L+A   +L VI
Sbjct: 207 GRAIGETMAVIMVVGNVATIPESILDPIRTLTGNIAIEMGYAAGEHSQALFATGIVLFVI 266

Query: 253 FLYDQLL 259
            ++   +
Sbjct: 267 IMFLNFM 273



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 17/153 (11%)

Query: 397 ASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVS 442
           A II +P+ +             ++  ++P  +LLA  P+ V+         P +     
Sbjct: 76  ALIIGVPLSVGCAIFLAEIAPKQMTRIVRPAIELLAGIPSVVYGFYGLVILVPFIREIFG 135

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               +      +L I       + N+      + P ++KE + +   T W+  + +I+P 
Sbjct: 136 GRGFSIIGGSVVLAIM--ILPTIVNISEDAIRSVPKEYKEGSLALGATHWQTIKKVIVPS 193

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +TG +   G A   ++   +       +
Sbjct: 194 ASSGILTGVVLGMGRAIGETMAVIMVVGNVATI 226


>gi|308178581|ref|YP_003917987.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter inner membrane subunit [Arthrobacter
           arilaitensis Re117]
 gi|307746044|emb|CBT77016.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter, inner membrane subunit [Arthrobacter
           arilaitensis Re117]
          Length = 242

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 17/220 (7%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGM 98
              V  D+ +    TLD  ++  YA       + + +I LL       L  +   R+   
Sbjct: 24  GWLVTADLTETERQTLDPGTIWGYALEHLQLTVVSALIVLLIAIPLGVLLTRPGLRKAAP 83

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
            +  I +  Q+ P +G +     +               AI ++    +  +  +    L
Sbjct: 84  AVRAIANFGQAAPAIGVIVLLAFWLG--------FGAKTAIVSLVIYAILPVLSNTIVGL 135

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             +   L E  R   +S       + +P ++P ++  +  ++         +  I  G  
Sbjct: 136 QQVDERLVEAGRGIGMSQMAVLVKIELPLAVPVMLSGIRTALVLLVGTATLATFINGG-- 193

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                G+G  I   +     + ++   L +  +    D L
Sbjct: 194 -----GLGILITTGVNLNLNVVLIAGSLLVALLALTIDWL 228



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 13/198 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANV 432
           D   +       +   VV  +I  +I IP+G+ +        +  ++  A    A PA  
Sbjct: 40  DPGTIWGYALEHLQLTVVSALIVLLIAIPLGVLLTRPGLRKAAPAVRAIANFGQAAPAIG 99

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L+   + +      + L +  I      +L N I G         E      ++   
Sbjct: 100 VIVLLAFWLGFGAKTAIVSLVIYAIL----PVLSNTIVGLQQVDERLVEAGRGIGMSQMA 155

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               I LP   P  ++G  TA       + ++   + G       GLG  I         
Sbjct: 156 VLVKIELPLAVPVMLSGIRTALVLLVGTATLATFINGG-------GLGILITTGVNLNLN 208

Query: 553 PEVVLGVLIMCCFVLALN 570
             ++ G L++    L ++
Sbjct: 209 VVLIAGSLLVALLALTID 226


>gi|150388951|ref|YP_001319000.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
 gi|149948813|gb|ABR47341.1| binding-protein-dependent transport systems inner membrane
           component [Alkaliphilus metalliredigens QYMF]
          Length = 250

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           Y I     T+ R ++  +IA    I +G+  GF   +   ++P   +  A P      L 
Sbjct: 59  YFIVAVMNTLKRALIGFVIALGAGIGLGLMGGFFKPMYYLLRPIVLINKAVPTMAMILLA 118

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +  +       +    +L+ F   + I++ NV+ G         E+   + I      + 
Sbjct: 119 LIWLE------SEKAPILVGFVVIFPIIYENVVQGIRNVDVKLVEMMDMYDINKLDKLKD 172

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P I  Y       A G      I +EV S   + + T+             +   V 
Sbjct: 173 LYMPSIKSYLHGAMSAAMGLNLKIIIAAEVLSQPRLSMGTS-----FQIEKANLNTAGVF 227

Query: 557 LG-VLIMCCFVLA 568
              ++ +C   + 
Sbjct: 228 AWSLIAICIAGIL 240



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 88/250 (35%), Gaps = 13/250 (5%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +IL    S+ +      ++  +++  ++++++        P      +   +        
Sbjct: 4   SILKTKNSKELLYTALSIITLLILWKVVSVIVDKEILIPSPEKTFIEIISIIRAPYFIVA 63

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R L   VI+L        +    + +  +L PI+ I +++P +  +   +++  
Sbjct: 64  VMNTLKRALIGFVIALGAGIGLGLMGGFFKPMYYLLRPIVLINKAVPTMAMILLALIWLE 123

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +     ++G     IF I          ++ Q + N+   L E+   + ++   K   L 
Sbjct: 124 SEKAPILVG--FVVIFPIIYE-------NVVQGIRNVDVKLVEMMDMYDINKLDKLKDLY 174

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P     L   M  +M      ++A+E++      +      S+              ++
Sbjct: 175 MPSIKSYLHGAMSAAMGLNLKIIIAAEVLSQPRLSMGT----SFQIEKANLNTAGVFAWS 230

Query: 245 MLTMLGVIFL 254
           ++ +     L
Sbjct: 231 LIAICIAGIL 240


>gi|313793026|gb|EFS41093.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA1]
          Length = 238

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 80/211 (37%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + IA+I  IP G+ IG      +     +
Sbjct: 14  ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKTIAVACS 73

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 74  GALRALPSLGLLTLLAISTTNGIENPVVPSTIVLAILAIPPLLAGSYSGVDAIDDEVADG 133

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 134 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 186

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 187 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/221 (9%), Positives = 65/221 (29%), Gaps = 11/221 (4%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ I+ +           + R   
Sbjct: 8   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT 67

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + V     +++          +          +    + +   +    +  +    Y  +
Sbjct: 68  IAVACSGALRA----LPSLGLLTLLAISTTNGIENPVVPSTIVLAILAIPPLLAGSYSGV 123

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
             I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +G  
Sbjct: 124 DAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-- 181

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 182 -----GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 217


>gi|123443077|ref|YP_001007051.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090038|emb|CAL12901.1| putative ABC transport integral membrane subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 242

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 20/200 (10%)

Query: 74  SAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            + +I++           +   +    V+  I+ + Q+ P +  L   V           
Sbjct: 48  ISSIIAVFIGVSAGVAVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMG------- 100

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             +E  AI A+    +  +       + ++ RD+ EV+    +S  Q  W + +P + P 
Sbjct: 101 -FSEKPAIIALVLYGLLPILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPV 159

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V  +  S+        A+    VG        +GS I + +   +   ++   + +  +
Sbjct: 160 IVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAIVVALL 212

Query: 252 IFLYDQLLF---RPMIVWSN 268
             + D +     R +  W  
Sbjct: 213 AIITDMIFTRWNRRLSRWRE 232



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            ++ G+  G+      +          +YV       +   V+L++I+SII + +G+  G
Sbjct: 2   LLLAGLVFGMTSLGGFFSALFPDLDRPIYVQDTFWSLVVAHVLLVLISSIIAVFIGVSAG 61

Query: 410 FR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                       S ++    +   FP      + V  + +      + L L  +      
Sbjct: 62  VAVTRPAGKEFRSVVETIVAMGQTFPPVAVLAIAVPVMGFSEKPAIIALVLYGLL----P 117

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           IL   I G  +   D +EVA+   ++  +    + LP   P  V G  T+       + +
Sbjct: 118 ILQGAITGVESVSRDIREVAAGVGMSARQILWRVELPLAAPVIVAGIRTSVIINIGTAAI 177

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--W-HPLYLY 580
           +         + T  LG+ I       +   V+ G +++    +  +     W   L  +
Sbjct: 178 A-------STVGTKTLGSPIIIGLSGFNTAYVIQGAIVVALLAIITDMIFTRWNRRLSRW 230

Query: 581 GT 582
             
Sbjct: 231 RE 232


>gi|318080420|ref|ZP_07987752.1| permease membrane protein [Streptomyces sp. SA3_actF]
          Length = 312

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 86/289 (29%), Gaps = 9/289 (3%)

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
               +       R     R  G           +                P       ++
Sbjct: 8   DPAPERLARTATRYDRPHRARGDGGPQDDGREDDGRDGREDDGPRDEHDAPRGGRVERAS 67

Query: 338 QRVSYM-LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLII 395
           +R+S+  L    F +   +     +     +            IWL     +   V+   
Sbjct: 68  RRISWRELTFLPFVLALALLGTWIYYDTATLDVIARNSLGGGNIWLRVRQHIQLTVISTF 127

Query: 396 IASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
              II IP+GI +  +    +      FA +  A PA     L+V  +        + + 
Sbjct: 128 FVLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTGEFPALVGII 187

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  I      +L N IAG  A      E A    ++       + LP   P  ++G  TA
Sbjct: 188 IYAIL----PVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILSGVRTA 243

Query: 514 CGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                  A++ +     G   + T G+          GS   +VL +L+
Sbjct: 244 LVLNVGTATLATFGGGGGLGDIITAGITNQRMSVLVIGSILTIVLALLV 292



 Score = 63.0 bits (152), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 10/184 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                    +  ++ + L G         +  I   +L   ++     +     + +   
Sbjct: 69  RISWRELTFLPFVLALALLGTWIYYDTATLDVIARNSLGGGNIWLRVRQHIQLTVISTFF 128

Query: 79  SLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            L+       L  + R  +   V V   +I Q+ P LG L   V++            E 
Sbjct: 129 VLIIAIPLGILLTRQRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTG--------EF 180

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+  I    +  +  +    L      L E +R   +S       + +P ++P ++  +
Sbjct: 181 PALVGIIIYAILPVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILSGV 240

Query: 197 MMSM 200
             ++
Sbjct: 241 RTAL 244


>gi|182419583|ref|ZP_02950830.1| ABC transporter, permease protein [Clostridium butyricum 5521]
 gi|237667412|ref|ZP_04527396.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376552|gb|EDT74128.1| ABC transporter, permease protein [Clostridium butyricum 5521]
 gi|237655760|gb|EEP53316.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 254

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 18/189 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +  R ++    A ++ + +GI     P     I P    +   P  V   L +       
Sbjct: 61  SFVRTLISYSFALVLSVFLGILSSVYPFFKYLIAPLNSFVKTIPTLVLVVLALVWF---- 116

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASA----FPNDFKEVASSFHITGWRWWRYIILPG 501
                    ++ F   + IL+    G             E+   + +  +   R I LP 
Sbjct: 117 --DKDSAPFIVGFAIIFPILY---EGIQNSLTKIDTKIMEMTVIYEVCIFDKIRKIYLPT 171

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I  Y +   ++     +   I  EV           G+G+ I       +   +   +LI
Sbjct: 172 IKFYIMNIFVSTLSLTFKVVIAGEV-----HGQPKYGIGSQIQLEKVNFNTTGIFAWILI 226

Query: 562 MCCFVLALN 570
           +    L   
Sbjct: 227 IVLISLVFE 235



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 97/237 (40%), Gaps = 14/237 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F  + F+++  +I + ++          I+  +   +   +   Y S + +R L +   
Sbjct: 12  LFSCVLFLVLWEVIAVTINNDIYIPRIECILKELLNLVKDKNFYMYVSSSFVRTLISYSF 71

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           +L+ +     L++       ++ P+   +++IP L  +   +V+F       ++G   A 
Sbjct: 72  ALVLSVFLGILSSVYPFFKYLIAPLNSFVKTIPTLVLVVLALVWFDKDSAPFIVG--FAI 129

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IF I    + N       SL  I   + E++  + +  + K   + +P     ++   + 
Sbjct: 130 IFPILYEGIQN-------SLTKIDTKIMEMTVIYEVCIFDKIRKIYLPTIKFYIMNIFVS 182

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++S  +  V+A E+        P  GIGS I L     +   I   +L ++ +  ++
Sbjct: 183 TLSLTFKVVIAGEV-----HGQPKYGIGSQIQLEKVNFNTTGIFAWILIIVLISLVF 234


>gi|156742500|ref|YP_001432629.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156233828|gb|ABU58611.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 213

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +  L    ++ I+L        + A+   L  +++ IL I+ +IP L         F+
Sbjct: 15  AGQHLLMSGVSLAIALAIALPMGIICARVAWLRSLVLGILGIIYTIPSLSL-------FV 67

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P   +G   A I  +  +Q+  +  ++   L  I   + E +R   ++  Q+ W + 
Sbjct: 68  LLIPFTGLGLRPAVIALVAYAQLV-LVRNVVVGLTGIDPAIVEAARGMGMTALQRLWRVE 126

Query: 185 VPFSMPGLVWNMMMS 199
           +P ++P ++  + ++
Sbjct: 127 LPLALPIILAGVRVA 141



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 11/204 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
           +   ++ YV+ L    +    V + IA  I +P+GI       + S +     ++   P+
Sbjct: 3   YLIDNLPYVLSLAGQHLLMSGVSLAIALAIALPMGIICARVAWLRSLVLGILGIIYTIPS 62

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              F   V  + +  L     +  L+ +  Q  ++ NV+ G +       E A    +T 
Sbjct: 63  LSLF---VLLIPFTGLGLRPAVIALVAY-AQLVLVRNVVVGLTGIDPAIVEAARGMGMTA 118

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    + LP   P  + G   A         ++   + G + L          +     
Sbjct: 119 LQRLWRVELPLALPIILAGVRVATLSIIAIGTIAAFINAGGLGLLLF-------DGVRSS 171

Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574
           +  +++ G + +    +  N  LW
Sbjct: 172 NPEKIIAGAVAVSVLAIGANGVLW 195


>gi|332982528|ref|YP_004463969.1| phosphate ABC transporter membrane protein 1 [Mahella australiensis
           50-1 BON]
 gi|332700206|gb|AEE97147.1| phosphate ABC transporter membrane protein 1, PhoT family [Mahella
           australiensis 50-1 BON]
          Length = 295

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +    +  +VIS   +   A             +L P++++   IP +  G++  +V+  
Sbjct: 78  SLAVSILGIVISAPVSISSAIFMVDIAPAWGQKLLQPVIELFVGIPSVVYGWIGLSVLVP 137

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+    G +  + LA    +       +      +L  IP +L E S +   + WQ    
Sbjct: 138 FIRNNIGGLGFSVLAGGLVLAVMMFPTIASVAADALRAIPEELNEASLALGATRWQTIRR 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + +P + PGL+  +++ ++ G    +A +M++     IP
Sbjct: 198 VLLPAATPGLLTAIILGLARGLGEALAVQMVIGNAMNIP 236



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 9/163 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++   ++ I+I++ + I   I++           +QP  +L    P+ V+  + +S +  
Sbjct: 78  SLAVSILGIVISAPVSISSAIFMVDIAPAWGQKLLQPVIELFVGIPSVVYGWIGLSVLVP 137

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRY 496
                   L  ++    L++    +  + +V A    A P +  E + +   T W+  R 
Sbjct: 138 FIRNNIGGLGFSVLAGGLVLAVMMFPTIASVAADALRAIPEELNEASLALGATRWQTIRR 197

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           ++LP   P  +T  I         ++  ++     +++ ++ L
Sbjct: 198 VLLPAATPGLLTAIILGLARGLGEALAVQMVIGNAMNIPSSLL 240


>gi|315634922|ref|ZP_07890204.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aggregatibacter segnis ATCC 33393]
 gi|315476474|gb|EFU67224.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aggregatibacter segnis ATCC 33393]
          Length = 248

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R++   L+P+L I Q+IP+       V++       K+  A L   F +  +        
Sbjct: 82  RKISAFLMPLLVISQAIPVFAIAPLLVLWLGYGMASKITMAILIIYFPVTAAC------- 134

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  L N P+   +++++ R+S       + +P ++P L   + +++S      +A    
Sbjct: 135 -YDGLRNTPKPWLQLAQTLRISPAAMLLKVRLPAALPALASGLRIAVS------IAPIGA 187

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLL 239
           +VG+ V    G+G  +  A     + 
Sbjct: 188 IVGEWVGSSEGLGYLMLQANARMQID 213



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 10/142 (7%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             IS+ + P   +  A P     PL+V  + Y   +      L++ F     +      G
Sbjct: 82  RKISAFLMPLLVISQAIPVFAIAPLLVLWLGYGMASKITMAILIIYF----PVTAACYDG 137

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P  + ++A +  I+       + LP   P   +G   A   A   +IV E      
Sbjct: 138 LRNTPKPWLQLAQTLRISPAAMLLKVRLPAALPALASGLRIAVSIAPIGAIVGEWVG--- 194

Query: 532 IHLRTTGLGAYIAESTEKGSFP 553
               + GLG  + ++  +    
Sbjct: 195 ---SSEGLGYLMLQANARMQID 213


>gi|282863907|ref|ZP_06272964.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282560985|gb|EFB66530.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 223

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 63/166 (37%), Gaps = 15/166 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +++         L   +RR   + + +    +++P +G     V+ F+        
Sbjct: 36  LLATLVAAAIALPVGLLIGHTRRGAFIAINLSSFGRALPTVG---LVVLVFLASGLSM-- 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                   A+    V ++  + Y  +  +  ++ + +R   +   Q    + +P ++P +
Sbjct: 91  ---WPVYIALVALAVPSIVTNTYAGMTAVDPEVRDAARGQGMRWHQVLLQVELPLALPLI 147

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +  + +++         +  +  G       G+G Y+   + ++DL
Sbjct: 148 MTGLRLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDL 186



 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++  ++A+ I +PVG+ IG     +      +    A P      LVV       L+   
Sbjct: 36  LLATLVAAAIALPVGLLIGHTRRGAFIAINLSSFGRALPTVG---LVVLVFLASGLSMWP 92

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I+ N  AG +A   + ++ A    +   +    + LP   P  +TG 
Sbjct: 93  VYIALVAL-AVPSIVTNTYAGMTAVDPEVRDAARGQGMRWHQVLLQVELPLALPLIMTGL 151

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             A       + ++   S+G       GLG Y+ +   +    +
Sbjct: 152 RLALIQVVATATIAAYVSFG-------GLGRYVFDGLAQRDLVQ 188


>gi|254416770|ref|ZP_05030520.1| ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196176510|gb|EDX71524.1| ABC transporter, permease protein, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 214

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 15/201 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I     +  +   +  L +L  + ISL+       L+A+SR    VL+  ++ ++ IP L
Sbjct: 12  IASHPDNFREALGQHLLLVLVPLTISLVLGLPLGLLSARSRTASTVLINTVNGLRVIPSL 71

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   + Y    +         +A  A+    +  +  S   +  NI   + E ++   
Sbjct: 72  AILFVAIPYLGLSF--------KSAAVALTLLALPPILISTDVAFRNIEPTIIEAAKGMG 123

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  Q    + +P  +P ++  +          V+AS  +      I   G+GS+I L  
Sbjct: 124 MSPRQILQQIEIPLVLPVIIAGIKT----ATVEVIASATLAA---FIGAGGLGSFIVLGF 176

Query: 234 KEQDLLAILYAMLTMLGVIFL 254
              D   +L   + +  +  +
Sbjct: 177 ALYDQSILLVGAIPVAILALV 197



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 11/160 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                 S+ +      L   P+     + +  +     +  + L+LL        IL + 
Sbjct: 49  ARSRTASTVLINTVNGLRVIPSLAILFVAIPYLGLSFKSAAVALTLLA----LPPILIST 104

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                       E A    ++  +  + I +P + P  + G  TA      ++ ++    
Sbjct: 105 DVAFRNIEPTIIEAAKGMGMSPRQILQQIEIPLVLPVIIAGIKTATVEVIASATLAAFIG 164

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            G       GLG++I           +++G + +    L 
Sbjct: 165 AG-------GLGSFIVLGFALYDQSILLVGAIPVAILALV 197


>gi|150402274|ref|YP_001329568.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanococcus maripaludis C7]
 gi|150033304|gb|ABR65417.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanococcus maripaludis C7]
          Length = 291

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 87/220 (39%), Gaps = 14/220 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I   +  N+  L A +  + I  ++L  I  +     +V        +   P Y S    
Sbjct: 6   IGESVLENLLKLNALLSSVIIFAMVLFLIFSSLPVFSVVSPFDFVFGLDWSPNYDSYGIF 65

Query: 71  RMLSA----MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----L 116
            M+       V++L+F+       A        +++  +L P ++I+ +IP + +    +
Sbjct: 66  PMIIGSFLVTVLALVFSIPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGM 125

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V    +++      + LAA   +    V  +T     ++ ++P  L+E S +   + 
Sbjct: 126 VLLVPLIRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPSQLKEGSLAMGATR 185

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           WQ    + +P S+ G++  +++ M       +A  M+   
Sbjct: 186 WQTIKKVILPASLSGILSGVILGMGRAIGETMAVLMVAGN 225



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 80/221 (36%), Gaps = 12/221 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCIT 386
           EN L+L +      +  +  F +   + +        ++         D   +  +   +
Sbjct: 12  ENLLKLNALLSSVIIFAMVLFLIFSSLPVFSVVSPFDFVFGLDWSPNYDSYGIFPMIIGS 71

Query: 387 MFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPL 436
               V+ ++ +  + +   I++       + + ++P  ++L A P+ V+         PL
Sbjct: 72  FLVTVLALVFSIPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGMVLLVPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    +       L  S+++       I        ++ P+  KE + +   T W+  + 
Sbjct: 132 IRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPSQLKEGSLAMGATRWQTIKK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP      ++G I   G A   ++   + +     + T+
Sbjct: 192 VILPASLSGILSGVILGMGRAIGETMAVLMVAGNWPLIPTS 232


>gi|255658456|ref|ZP_05403865.1| phosphate ABC transporter, permease protein PstA [Mitsuokella
           multacida DSM 20544]
 gi|260849793|gb|EEX69800.1| phosphate ABC transporter, permease protein PstA [Mitsuokella
           multacida DSM 20544]
          Length = 283

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 68/186 (36%), Gaps = 5/186 (2%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
                 L+   +  LL+       P  I+      +    +      +   +  +M IS+
Sbjct: 18  GFFILGLLAAFLGYLLYKGLPVLSPHFILGKSSDIMAGGGVGSQLFNSFYMLFLSMAISI 77

Query: 81  LFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
                     A+  R   +   I   ++ + ++P +    F ++ F+N+    +  + L 
Sbjct: 78  PIALGAGIYLAEYARENKLTKCIRLSVESLATVPSIVLGLFGMIIFVNMM--NMGFSILG 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               +    +  +     +S+  +P+  EE S +   +  Q  + + +P +MPG++  + 
Sbjct: 136 GSLTLVLLNLPMLVRVTEESIRTVPKSYEEASLALGATKLQTIFKVVLPSAMPGIITGIT 195

Query: 198 MSMSGG 203
           ++    
Sbjct: 196 LTAGRA 201



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 66/187 (35%), Gaps = 11/187 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASI 399
           +++  F   ++      + ++ +  +  HF       ++  G +   +F    ++ ++  
Sbjct: 15  WLVGFFILGLLAAFLGYLLYKGLPVLSPHFILGKSSDIMAGGGVGSQLFNSFYMLFLSMA 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMI 457
           I IP+ +  G      ++     + +  +  +    P +V+           + +   ++
Sbjct: 75  ISIPIALGAGIYLAEYARENKLTKCIRLSVESLATVPSIVLGLFGMIIFVNMMNMGFSIL 134

Query: 458 FGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            G+   +L N               P  ++E + +   T  +    ++LP   P  +TG 
Sbjct: 135 GGSLTLVLLNLPMLVRVTEESIRTVPKSYEEASLALGATKLQTIFKVVLPSAMPGIITGI 194

Query: 511 ITACGGA 517
               G A
Sbjct: 195 TLTAGRA 201


>gi|17988009|ref|NP_540643.1| glycine betaine/L-proline transport system permease protein proW
           [Brucella melitensis bv. 1 str. 16M]
 gi|23501131|ref|NP_697258.1| ABC transporter permease [Brucella suis 1330]
 gi|62289196|ref|YP_220989.1| ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|82699132|ref|YP_413706.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|163842489|ref|YP_001626893.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|225851751|ref|YP_002731984.1| binding-protein-dependent transport systems inner membrane protein
           [Brucella melitensis ATCC 23457]
 gi|256368685|ref|YP_003106191.1| ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|17983753|gb|AAL52907.1| glycine betaine/l-proline transport system permease protein prow
           [Brucella melitensis bv. 1 str. 16M]
 gi|23347004|gb|AAN29173.1| ABC transporter, permease protein [Brucella suis 1330]
 gi|62195328|gb|AAX73628.1| ABC transporter, permease protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615233|emb|CAJ10181.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|163673212|gb|ABY37323.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|225640116|gb|ACO00030.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|255998843|gb|ACU47242.1| ABC transporter, permease protein [Brucella microti CCM 4915]
          Length = 386

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 255

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 255

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373


>gi|227894585|ref|ZP_04012390.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863576|gb|EEJ70997.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 331

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  +++ L    +A   A       S++    L  + +++  IP + +    LT  V  
Sbjct: 116 FAVTLLAALVATPFAIAIALYMTEYSSKKGASFLQSVTELLVGIPSVVYGFLGLTIIVPV 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             NL+ G   G  LAA   +F   +  +T     SL  +P    + S + R + WQ  ++
Sbjct: 176 IRNLFGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALRATHWQTIYH 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +               + +     + ++A+++  P  I I            +S
Sbjct: 88  IFHFLTSSDWDPGEGKNHVGAAVMIVTSFAVTLLAALVATPFAIAIALYMTEYSSKKGAS 147

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 148 FLQSVTELLVGIPSVVYGFLGLTIIVPVIRNLFGGTGFGILAATLVLFVMVLPTITSLTV 207

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+ F++ + +   T W+   +++L    P  +T  I     A+  ++  ++   
Sbjct: 208 DSLKAVPSHFRKASMALRATHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIG 267

Query: 530 GHIHL 534
             + +
Sbjct: 268 NAVLM 272


>gi|269797020|ref|YP_003316475.1| proline/glycine betaine ABC transporter permease [Sanguibacter
           keddieii DSM 10542]
 gi|269099205|gb|ACZ23641.1| ABC-type proline/glycine betaine transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 228

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 6/155 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP-- 420
           +I ++ +   +Q    ++ L    +   +  +++AS+I +P+G+ +G     +       
Sbjct: 7   AIAWLNDPLNWQGKGGILALTGEHLVMTLQAVLLASVIALPLGVVLGHSRRAAKLGTSTV 66

Query: 421 -FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               +  A P      +  S    +   P ++ + +        IL N   G  +   D 
Sbjct: 67  VLTNVTRALPTFALLTIFASTGVGFGNTPTVYAAAIFALPV---ILANTYEGVRSVDADI 123

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++ A+   ++G R    + LP   P   +G  TA 
Sbjct: 124 RDAATGIGMSGTRVLLQVELPLALPLITSGLRTAA 158



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 61/164 (37%), Gaps = 10/164 (6%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           + E +     ++          +        +  L A++++ +       +   SRR   
Sbjct: 1   MNEISAAIAWLNDPLNWQGKGGILALTGEHLVMTLQAVLLASVIALPLGVVLGHSRRAAK 60

Query: 99  VLVP---ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +      + ++ +++P    L  T+     +  G       AAIFA+       +  + Y
Sbjct: 61  LGTSTVVLTNVTRALPTFALL--TIFASTGVGFGNTPTVYAAAIFALPV-----ILANTY 113

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           + + ++  D+ + +    +SG +    + +P ++P +   +  +
Sbjct: 114 EGVRSVDADIRDAATGIGMSGTRVLLQVELPLALPLITSGLRTA 157


>gi|15807807|ref|NP_285462.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6460516|gb|AAF12222.1|AE001862_48 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 247

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 93/240 (38%), Gaps = 16/240 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
            + +      +T + R    +     +  +L     +       +M + LL        A
Sbjct: 18  FVLVAAQQGWKTVLSRLFPQVSTPIYERDTLLALTLQHLQLTGLSMALVLLVGLSLGIWA 77

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
             +RR G   +P+++ + ++          V F+ L    +     AAI A+F   +  +
Sbjct: 78  --TRRRGQPFLPLVNNLTTVGQT--FPPVAVLFLAL--PILGFGPRAAILALFAYALLPV 131

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T  +   L ++P ++++ +R   LS  ++ W L  P ++P  +  +  ++         +
Sbjct: 132 TRGVILGLQSVPENVQDAARGLGLSERERLWRLEWPTALPSTLAGIRTALVLTVATATLA 191

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267
            ++  G       G+G  I   +   +L  IL   + +  +  L D   ++L R +  W+
Sbjct: 192 PLVGTG-------GLGVPIIAGLGADNLALILEGAVPVALLALLCDWTLRVLERGLTPWA 244



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 78/240 (32%), Gaps = 13/240 (5%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGI 406
           W      VA    W+++   +       +     L  +T+  + +  + +A ++ + + +
Sbjct: 14  WLAFFVLVAAQQGWKTVLSRLFPQVSTPIYERDTLLALTLQHLQLTGLSMALVLLVGLSL 73

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG-TQWYIL 465
            I           P    L       F P+ V  ++   L      ++L +F      + 
Sbjct: 74  GIWATRRRGQPFLPLVNNLTTVGQT-FPPVAVLFLALPILGFGPRAAILALFAYALLPVT 132

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             VI G  + P + ++ A    ++       +  P   P  + G  TA       + ++ 
Sbjct: 133 RGVILGLQSVPENVQDAARGLGLSERERLWRLEWPTALPSTLAGIRTALVLTVATATLAP 192

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
           +   G       GLG  I       +   ++ G + +    L  +   R L   L  +  
Sbjct: 193 LVGTG-------GLGVPIIAGLGADNLALILEGAVPVALLALLCDWTLRVLERGLTPWAA 245


>gi|148259843|ref|YP_001233970.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
 gi|146401524|gb|ABQ30051.1| binding-protein-dependent transport systems inner membrane
           component [Acidiphilium cryptum JF-5]
          Length = 254

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 85/235 (36%), Gaps = 19/235 (8%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI----- 402
           W  VV G+A    WQ +   +    Y        +      R  +L+ + S + +     
Sbjct: 7   WAPVVFGLAALGVWQGLVIGLRMPPYVLPGPAAIVAAFWADRASLLLSLVSTLAVTGAAL 66

Query: 403 --------PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
                    + + +       + IQP+A +L   P     PL++  V        +  ++
Sbjct: 67  LAAALLGMALALAMAASRLARAAIQPWAVVLQVTPVVAIAPLIIIWVHQQFAAMVVCATI 126

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           +      + +L N  AG +A P +  ++      + W+    + LP   P+++ G   A 
Sbjct: 127 V----AFFPVLSNTAAGLAATPPELADLFRLNGASRWQTLALLRLPSALPFFLAGLRIAG 182

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A   ++V+E  +         GL   I E+  +   P +   + ++    + +
Sbjct: 183 TLALVGAVVAEFVASSGGF--AGGLAGRILEAGYRLEIPRMFAALTLLALTGIVI 235



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 60/163 (36%), Gaps = 10/163 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR     + P   ++Q  P++      +++    +   V+ A + A F + +        
Sbjct: 83  SRLARAAIQPWAVVLQVTPVVAIAPLIIIWVHQQFAAMVVCATIVAFFPVLS-------- 134

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    L   P +L ++ R    S WQ    L +P ++P  +  + ++ +      V +E 
Sbjct: 135 NTAAGLAATPPELADLFRLNGASRWQTLALLRLPSALPFFLAGLRIAGTLALVGAVVAEF 194

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             V  +     G+   I  A    ++  +  A+  +     + 
Sbjct: 195 --VASSGGFAGGLAGRILEAGYRLEIPRMFAALTLLALTGIVI 235


>gi|45358659|ref|NP_988216.1| phosphate ABC transporter inner membrane protein [Methanococcus
           maripaludis S2]
 gi|45047525|emb|CAF30652.1| Binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis S2]
          Length = 291

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 87/220 (39%), Gaps = 14/220 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYAS 66
           I   +  NI  L A +  + I  ++L  I  +     +V+ +   L       +      
Sbjct: 6   IGESVLENILKLSALLSSVIIFAMVLFLILSSLPVFSVVNPLDFVLGSDWSPINDAYGIF 65

Query: 67  RTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----L 116
              +      V++L+F+       A        +++  +L P ++I+ +IP + +    +
Sbjct: 66  PMIVGSFLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGM 125

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V    +++      + LAA   +    V  +T     ++ ++P+ L+E S +   + 
Sbjct: 126 VLLVPLIRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPQQLKEGSLAMGATR 185

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           WQ    + +P S+ G++  +++ M       +A  M+   
Sbjct: 186 WQTIKKVVLPASLSGILSGVILGMGRAIGETMAVLMVAGN 225



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 79/213 (37%), Gaps = 12/213 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--FTYQDVLYVIWLGCIT 386
           EN L+L +      +  +  F ++  + +      + +++        D   +  +   +
Sbjct: 12  ENILKLSALLSSVIIFAMVLFLILSSLPVFSVVNPLDFVLGSDWSPINDAYGIFPMIVGS 71

Query: 387 MFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPL 436
               V+ ++ +  + +   I++       + + ++P  ++L A P+ V+         PL
Sbjct: 72  FLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGMVLLVPL 131

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    +       L  S+++       I        ++ P   KE + +   T W+  + 
Sbjct: 132 IRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPQQLKEGSLAMGATRWQTIKK 191

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           ++LP      ++G I   G A   ++   + + 
Sbjct: 192 VVLPASLSGILSGVILGMGRAIGETMAVLMVAG 224


>gi|126463057|ref|YP_001044171.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126104721|gb|ABN77399.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 238

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 14/221 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + L G     +P     +  +  +   L +    T   +L  + + LL         A 
Sbjct: 17  VVSLSGAPPYILPGPAAVLRALADNRGMLARNGLATLAEILLGLGLGLLIGLAAGLATAL 76

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S ++  +L P+L + Q++P+        ++       KV    L   F + ++       
Sbjct: 77  STQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSKVAVVVLITFFPVASA------- 129

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            ++  L   P    +++R  R   W+   +L +P ++P L   + ++       V A   
Sbjct: 130 -LHDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIA------AVYAPIG 182

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            V+G+ V    G+G  + LA        +  A+  +  +  
Sbjct: 183 AVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAMTL 223



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   ++P   L  A P     P++   + Y   +       +++  T + +   +
Sbjct: 75  ALSTQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSK----VAVVVLITFFPVASAL 130

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  A P    ++A       WR   ++ LP   P+       A   A   +++ E   
Sbjct: 131 HDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIAAVYAPIGAVIGEWVG 190

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  +  +  +     +   + ++    L L
Sbjct: 191 ------SSAGLGHLMLLANARMKTDLMFAALAVLAAMTLGL 225


>gi|323488024|ref|ZP_08093277.1| ABC transport system permease protein [Planococcus donghaensis
           MPA1U2]
 gi|323398292|gb|EGA91085.1| ABC transport system permease protein [Planococcus donghaensis
           MPA1U2]
          Length = 580

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 87/540 (16%), Positives = 177/540 (32%), Gaps = 86/540 (15%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF---------LTF 118
                 A+V+ +LF+++ A +    +R   + + +   I   I  L +         +T 
Sbjct: 84  LGSTTLALVLGILFSWIVAYVQLSGKRAMQLFIFLPFVIPSYITTLAWTQFFSASGPVTA 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            + +         + +    I  +  S    +          IPR+LEE + +  LS  +
Sbjct: 144 MLSWLPGEPQAPNLYSIGGIILLLGISHYPLVYLFTVNVFRKIPRELEEAAATSGLSKKR 203

Query: 179 KFWYLGVPFSMPGLVWNMMMS-------MSGGWFFVVASEMIVVGDTVI-PLPGIGSYIA 230
            FW + +P ++PG+    +++            F    + + V+   +   + G G    
Sbjct: 204 TFWKIVLPLALPGIASGGLIAFLSNLDNFGIPAFLGTPANIRVLSTYIYEQVVGFGP--- 260

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR 290
            A     +L+++  ++ +LG +      L R                     S V    R
Sbjct: 261 SAFSRAAVLSVILGVIALLGTVL--QWFLLR--------------------RSRVNETNR 298

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
             +  R    +    F  +S  +  L  +L                      ++ +    
Sbjct: 299 SDSTPRIYLSAGKQKFLEISLWIFLLVTSLMP--------------------LITMGALS 338

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
           ++    +    +++      + +      +     ++   +  +++  +I   V      
Sbjct: 339 LISAYGVPFKLENLSLRNYEYVFLTDSKPLSALSNSLQLALFTMLVCLVIGTAVAYLRFK 398

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI- 469
            P  S+K    A+L    P  +   +   C+ +  L P    +   I+GT W +    I 
Sbjct: 399 YPDWSTKT---AELFMTIPYALPGTVFALCMIFMWLEPIPGWNP-GIYGTVWILFIAYIT 454

Query: 470 -----------AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                                +E A +    GW  WR I+LP +FP  V+GA+     A 
Sbjct: 455 RFLVLQVRGSYTAFLQIDPSMEEAARTSGAAGWVKWRKILLPLLFPGIVSGALLVFLMAL 514

Query: 519 NASIVSEVA-SWGHIHLRTTGLGA----YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               VS +  S G   +     G     Y   ST   +   +VLG+L      + L +  
Sbjct: 515 TELTVSSLLWSSGSETVGVVIFGYEQAGYSTYSTAFSTV--LVLGILFGGGLFMLLGKLW 572


>gi|260460945|ref|ZP_05809195.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259033522|gb|EEW34783.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 387

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 8/134 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-------- 124
           L +++ +++       L  +  RL   ++ +L+I+Q+IP +      +            
Sbjct: 184 LGSLLAAVVVGLPLGILCHRVERLRAGVLNVLNIIQTIPSIALFGLLIAPLGWVATHVPG 243

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G        A  A+F   +  +  +    L  +PR   + +R   ++  Q+ + + 
Sbjct: 244 AAALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGMGMTERQRLFGVE 303

Query: 185 VPFSMPGLVWNMMM 198
            P + P ++  + +
Sbjct: 304 FPLAFPVILTGIRI 317



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 49/136 (36%), Gaps = 12/136 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  ++ A ++ +P+GI       + + +     ++   P+   F L+++ + +   +   
Sbjct: 184 LGSLLAAVVVGLPLGILCHRVERLRAGVLNVLNIIQTIPSIALFGLLIAPLGWVATHVPG 243

Query: 451 WLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +L             +   +   ++ N + G +  P    + A    +T  +    + 
Sbjct: 244 AAALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGMGMTERQRLFGVE 303

Query: 499 LPGIFPYYVTGAITAC 514
            P  FP  +TG     
Sbjct: 304 FPLAFPVILTGIRIVL 319


>gi|260463373|ref|ZP_05811574.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|319784371|ref|YP_004143847.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|259030963|gb|EEW32238.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|317170259|gb|ADV13797.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 292

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 12/211 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            WQ I   +   T Q  L++     +T+    +  +I ++  I  GI +G    ++    
Sbjct: 71  IWQQIWSWITEGTSQGPLWL--QIYVTLEETFLGFVIGALGGIAAGIILGRNRLLADVFS 128

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            + ++  + P  V   + +  +     +      +++ F        N   G        
Sbjct: 129 IYIKIANSVPRVVLGSVFIIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRAM 184

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A     + ++  R +I+P    + +     + G A   ++V E            G+
Sbjct: 185 IANAQILGASPFQITRTVIIPSAMSWILASLHVSFGFALVGAVVGEFLG------AKQGM 238

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G  I+ +    +   V   ++I+    L + 
Sbjct: 239 GLLISTAQGAFNANGVFAAMIILAVMALVVE 269



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 14/207 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L      T        VI  L       +  ++R L  V    + I  S+P + 
Sbjct: 82  GTSQGPLWLQIYVTLEETFLGFVIGALGGIAAGIILGRNRLLADVFSIYIKIANSVPRVV 141

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  ++        KV  A +   F +F         + +Q +    R +   ++    
Sbjct: 142 LGSVFIIALGLGMASKVALAVVMVFFVVFA--------NAFQGVREADRAMIANAQILGA 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +Q    + +P +M  ++ ++ +S     F +V +   VVG+ +    G+G  I+ A  
Sbjct: 194 SPFQITRTVIIPSAMSWILASLHVSFG---FALVGA---VVGEFLGAKQGMGLLISTAQG 247

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +   +  AM+ +  +  + + ++ R
Sbjct: 248 AFNANGVFAAMIILAVMALVVEFIITR 274


>gi|77464215|ref|YP_353719.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77388633|gb|ABA79818.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 238

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 14/221 (6%)

Query: 33  NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92
            + L G     +P     +  +  +   L +    T   +L  + + LL         A 
Sbjct: 17  VVSLSGAPPYILPGPAAVLRALAENRGMLARNGLATLAEILLGLGLGLLIGLAAGLATAL 76

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           S ++  +L P+L + Q++P+        ++       KV    L   F + ++       
Sbjct: 77  STQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSKVAVVVLITFFPVASA------- 129

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            ++  L   P    +++R  R   W+   +L +P ++P L   + ++       V A   
Sbjct: 130 -LHDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIA------AVYAPIG 182

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
            V+G+ V    G+G  + LA        +  A+  +  +  
Sbjct: 183 AVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAMTL 223



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   ++P   L  A P     P++   + Y   +       +++  T + +   +
Sbjct: 75  ALSTQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSK----VAVVVLITFFPVASAL 130

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  A P    ++A       WR   ++ LP   P+       A   A   +++ E   
Sbjct: 131 HDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIAAVYAPIGAVIGEWVG 190

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  +  +  +     +   + ++    L L
Sbjct: 191 ------SSAGLGHLMLLANARMKTDLMFAALAVLAAMTLGL 225


>gi|254518615|ref|ZP_05130671.1| ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226912364|gb|EEH97565.1| ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 255

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 96/238 (40%), Gaps = 14/238 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  V++   ++  ++         +I++ +   +   +       + LR   +  I+L+
Sbjct: 16  LLIIVVIWIFLSNKINNSIYLPKISEIINEILRIIKEKNFLLNIINSLLRGFISFFIALI 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   ++  ++ +   L PI  I++SIP + F+   +++    Y   +IG  +A  F 
Sbjct: 76  IAIVLGIVSGFNKFVYNFLYPINSILKSIPTIAFILIALIWLNKNYAPYLIGIIIA--FP 133

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I      N   +          +L E+  SF +S + K   + +   +  +   +  + S
Sbjct: 134 ILYETTVNSILNG-------NSELNEMVESFEVSFFDKLLSIHIQAIIISISSIVTSTFS 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                V+A E+        PL GIG+ I       +   I   ++ +  + ++ D+++
Sbjct: 187 LVLKVVIAGEVYG-----QPLYGIGTAIQGEKINFNTSGIFAWIIIVAILCYITDKII 239



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 12/196 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            +     ++ R  +   IA II I +GI  GF   + + + P   +L + P   F  + +
Sbjct: 55  FLLNIINSLLRGFISFFIALIIAIVLGIVSGFNKFVYNFLYPINSILKSIPTIAFILIAL 114

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             +         +   L+     + IL+   +       ++  E+  SF ++ +     I
Sbjct: 115 IWL------NKNYAPYLIGIIIAFPILYETTVNSILNGNSELNEMVESFEVSFFDKLLSI 168

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +  I     +   +         I  EV           G+G  I       +   +  
Sbjct: 169 HIQAIIISISSIVTSTFSLVLKVVIAGEV-----YGQPLYGIGTAIQGEKINFNTSGIFA 223

Query: 558 GVLIMCCFVLALNRFL 573
            ++I+       ++ +
Sbjct: 224 WIIIVAILCYITDKII 239


>gi|256158922|ref|ZP_05456769.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella ceti M490/95/1]
 gi|261221448|ref|ZP_05935729.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|260920032|gb|EEX86685.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
          Length = 390

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|139437189|ref|ZP_01771349.1| Hypothetical protein COLAER_00328 [Collinsella aerofaciens ATCC
           25986]
 gi|133776836|gb|EBA40656.1| Hypothetical protein COLAER_00328 [Collinsella aerofaciens ATCC
           25986]
          Length = 308

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 75/209 (35%), Gaps = 9/209 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            LA V VI I     +          + D    T                     V +L 
Sbjct: 44  FLAVVTVILIFVFTTYSALPVFTDIGLADFFSFTWAPSEGHYGILSLLAGSGLVTVGALA 103

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY---FMNLYPGKVI 132
                    A       S+R+  ++ P +D++  IP + +  F ++    F+    G + 
Sbjct: 104 MGVPLGVGTAVYLVEIASKRVRKLISPAVDLLAGIPSIIYGFFGMIIIRPFIAQLTGGLG 163

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L A F +    V  +T     +L +IP  + E S +   + WQ  + + +P +  G+
Sbjct: 164 FGALTAWFVLAIMIVPTITTLTIDALNSIPMGIREASYAMGATKWQTIYKVVLPAAKLGI 223

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           V  +++ M       +A  M+V    VIP
Sbjct: 224 VDAIVLGMGRAIGETMAVLMVVGNAPVIP 252



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 61/203 (30%), Gaps = 20/203 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIIIASI- 399
           F   V   +       S   +       D     W       G +++     L+ + ++ 
Sbjct: 44  FLAVVTVILIFVFTTYSALPVFTDIGLADFFSFTWAPSEGHYGILSLLAGSGLVTVGALA 103

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLN 447
           + +P+G+             +   I P   LLA  P+ ++    +  +          L 
Sbjct: 104 MGVPLGVGTAVYLVEIASKRVRKLISPAVDLLAGIPSIIYGFFGMIIIRPFIAQLTGGLG 163

Query: 448 PNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +  ++       +    I   ++ P   +E + +   T W+    ++LP      
Sbjct: 164 FGALTAWFVLAIMIVPTITTLTIDALNSIPMGIREASYAMGATKWQTIYKVVLPAAKLGI 223

Query: 507 VTGAITACGGAWNASIVSEVASW 529
           V   +   G A   ++   +   
Sbjct: 224 VDAIVLGMGRAIGETMAVLMVVG 246


>gi|315185722|gb|EFU19489.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta thermophila DSM 6578]
          Length = 252

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             ++++L         P ++V  V   L       + + TTLR L     +L        
Sbjct: 23  WKVVSLLAGSPLIVPSPEEVVLKVVGILRDPLFLSHVAVTTLRALGGFACALTVGVALGV 82

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           L   S  L + L     ++QS+P++  +   +++         +G+ L   +        
Sbjct: 83  LGGVSGGLILPLRAAAVVLQSVPVVSVILILLIW---------VGSALTPFWVGLAMAFP 133

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +  + +   P DL E++R+F LS   +   + +P  +P ++     ++S  W  V+
Sbjct: 134 IILITTLEGMEAAPVDLLEMARAFGLSPRVQITRIYIPSLIPFVLAGARSALSLVWKAVI 193

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           A+E+I       P  G+G+ +  A    D   +  
Sbjct: 194 AAEVIA-----FPSSGVGTALYTAKLFIDTPGVFA 223



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 10/178 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T  R +     A  + + +G+  G    +   ++  A +L + P      +++  V  
Sbjct: 60  AVTTLRALGGFACALTVGVALGVLGGVSGGLILPLRAAAVVLQSVPVVSVILILLIWVGS 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 + L++         IL   + G  A P D  E+A +F ++       I +P + 
Sbjct: 120 ALTPFWVGLAM-----AFPIILITTLEGMEAAPVDLLEMARAFGLSPRVQITRIYIPSLI 174

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           P+ + GA +A    W A I +EV ++      ++G+G  +  +      P V    LI
Sbjct: 175 PFVLAGARSALSLVWKAVIAAEVIAF-----PSSGVGTALYTAKLFIDTPGVFAWTLI 227


>gi|300854426|ref|YP_003779410.1| putative phosphate transporter permease [Clostridium ljungdahlii
           DSM 13528]
 gi|300434541|gb|ADK14308.1| predicted phosphate transport system permease protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 299

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 67/159 (42%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           + L  + A++IS       A        +    +L P L++   IP +  G++ F+V+  
Sbjct: 82  SILVSVGAVIISAPIGIALAVFMHYISPKVGSKILQPSLELFVGIPSVVYGWVGFSVLLP 141

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+    G +  + +A I  +    +  +      ++  IP+   E S     + WQ    
Sbjct: 142 FLKRGFGGIGFSLIAGILVLSIMILPTIASISADAVKTIPKSYMEASYGIGATRWQTIRR 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + +P +  G++  +++ ++  +   +A +M++      P
Sbjct: 202 VIIPSAKSGILTGVVLGLARAFGEALAVQMVIGNTVKFP 240



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 72/209 (34%), Gaps = 13/209 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +F F       +   +    ++       D         I     +++ + A II  P
Sbjct: 36  IIVFIFSKGINTFVKWRYPITEFLFTSNWVPDSSNPKLGAAIFFVGSILVSVGAVIISAP 95

Query: 404 VGIWIG-----FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLW 451
           +GI +        P + S  +QP  +L    P+ V+  +  S +       +  +  +L 
Sbjct: 96  IGIALAVFMHYISPKVGSKILQPSLELFVGIPSVVYGWVGFSVLLPFLKRGFGGIGFSLI 155

Query: 452 LSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L++       + ++        P  + E +     T W+  R +I+P      +TG 
Sbjct: 156 AGILVLSIMILPTIASISADAVKTIPKSYMEASYGIGATRWQTIRRVIIPSAKSGILTGV 215

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +     A+  ++  ++     +      L
Sbjct: 216 VLGLARAFGEALAVQMVIGNTVKFPKNLL 244


>gi|261324335|ref|ZP_05963532.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261300315|gb|EEY03812.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
          Length = 390

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+++IP     G L   + +F   +P     G     
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVRTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 200 GIPLGLICHRLPRLRASVLNSLNIVRTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 259

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 260 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 319

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 320 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 377


>gi|148658244|ref|YP_001278449.1| phosphate ABC transporter inner membrane subunit PstA [Roseiflexus
           sp. RS-1]
 gi|148570354|gb|ABQ92499.1| phosphate ABC transporter, inner membrane subunit PstA [Roseiflexus
           sp. RS-1]
          Length = 424

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 74/211 (35%), Gaps = 24/211 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   +   M++++    +        A       ++   ++ +  +P + +    +  F+
Sbjct: 197 SLWVIAITMLLAIPIGILGGVYLEEYASDTWYYRLIETNINNLAGVPSIIYGILGLAVFV 256

Query: 125 NLYPGKVIGA-----------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                   GA            L+A   +    +  M  +  +++  +P+ L + S    
Sbjct: 257 RALEALTSGAMFGVTDSNGRTILSAGLTMALLVLPLMIINAREAIRAVPQSLRQASYGLG 316

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-----FFVVASEMIVVGDTV-----IPLP 223
            + WQ  W+  +P ++PG++   ++S+S          V+ +   VV           + 
Sbjct: 317 ATKWQTVWHHVLPNALPGILTGTILSVSRAMGETAPLIVIGASTFVVFFPDSVFDKFTVI 376

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            I  Y   +       +I  A + +L V  L
Sbjct: 377 PIQIYNWTSQPGAQFRSIAAAAIIVLLVTLL 407



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 25/180 (13%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------P 412
           +W +  ++    +   +L  +    +    V+    I  ++ IP+GI  G          
Sbjct: 170 SWINREFLTRPMSSVPLLAGVGNAILGSLWVIA---ITMLLAIPIGILGGVYLEEYASDT 226

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSY----------YHLNPNLWLSLL-----MI 457
                I+     LA  P+ ++  L ++              + +  +   ++L     M 
Sbjct: 227 WYYRLIETNINNLAGVPSIIYGILGLAVFVRALEALTSGAMFGVTDSNGRTILSAGLTMA 286

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++ N      A P   ++ +     T W+   + +LP   P  +TG I +   A
Sbjct: 287 LLVLPLMIINAREAIRAVPQSLRQASYGLGATKWQTVWHHVLPNALPGILTGTILSVSRA 346


>gi|46580882|ref|YP_011690.1| phosphate ABC transporter permease PstC [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46450302|gb|AAS96950.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 295

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 83/216 (38%), Gaps = 28/216 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--Y 122
           L    +S L       + A         R+   + P+++++Q++P  ++GF    +V  +
Sbjct: 73  LVVTALSSLIAIPLGIMTAIYLAELAGPRMRAYVKPLVEMLQALPSVVIGFFGMVIVAPW 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +          A   +    V  +T     ++ ++P D+ E S +   + WQ    
Sbjct: 133 LQETFDIATGLNIANASIMLAFMAVPTITSIAEDAIYSVPNDMREASLALGATHWQTIGR 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG------------IGSYIA 230
           + VP ++PG+   +++ M+      +   M+  G  +  LPG            I + +A
Sbjct: 193 VVVPAALPGISTAVILGMARSIGETMVVLMVAGGAAM--LPGSIFDPSRPMPASIAAEMA 250

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            A    D    L+A     G++  +  L F  +  W
Sbjct: 251 EAPFRSDHYHALFA----TGLVLFFFTLAFNALAAW 282



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 16/204 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F  + G  I        +I     Y       +     +   +V+  ++S+I IP+GI  
Sbjct: 31  FLFMEGFPIFQHVSLADFIFGKLWYPTFDPPEFGILPMIVGSLVVTALSSLIAIPLGIMT 90

Query: 409 GFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---------S 453
                    P + + ++P  ++L A P+ V        +    L     +         S
Sbjct: 91  AIYLAELAGPRMRAYVKPLVEMLQALPSVV-IGFFGMVIVAPWLQETFDIATGLNIANAS 149

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++ F     I         + PND +E + +   T W+    +++P   P   T  I  
Sbjct: 150 IMLAFMAVPTITSIAEDAIYSVPNDMREASLALGATHWQTIGRVVVPAALPGISTAVILG 209

Query: 514 CGGAWNASIVSEVASWGHIHLRTT 537
              +   ++V  + + G   L  +
Sbjct: 210 MARSIGETMVVLMVAGGAAMLPGS 233


>gi|92115062|ref|YP_574990.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
 gi|91798152|gb|ABE60291.1| binding-protein-dependent transport systems inner membrane
           component [Chromohalobacter salexigens DSM 3043]
          Length = 255

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDI 106
            D  P   +  S           +L + +IS+           +   R    ++  +  I
Sbjct: 42  PDQNPAMYERESFLNLTLAHVALVLVSSLISVSVGVGAGLFVTRPAGREFAPLVSTLAAI 101

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            Q+ P    L   V      +        +  + A+    +  +  +    L  +P    
Sbjct: 102 GQTFPPAAVLAIVVPLAGFGF--------VPTLVALVLYGLLPVVQNTVAGLGTVPPQTL 153

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R   +S WQ  W++ +P +M  +V  + +S+      ++      +G TV     +G
Sbjct: 154 EAARGNGMSAWQILWHIELPLAMRVIVAGVRVSV------IINIGTATIGSTVGATT-LG 206

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           + I   +   +L  ++   L +  +  + D    R
Sbjct: 207 TPIIAGLVGNNLPYVIQGALLVGLLAIVTDLAFER 241



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 17/247 (6%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
                +L     +  +L +    +V G+     W    +   +    +    + L    +
Sbjct: 3   RRTMPRLAPRSVLLIVLGVLLVTLVVGMEQLAPWFRAWFPDQNPAMYERESFLNLTLAHV 62

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSY 443
             V+V  +I+  + +  G+++        +  P    LAA     P      +VV    +
Sbjct: 63  ALVLVSSLISVSVGVGAGLFV--TRPAGREFAPLVSTLAAIGQTFPPAAVLAIVVPLAGF 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +   + L L  +      ++ N +AG    P    E A    ++ W+   +I LP   
Sbjct: 121 GFVPTLVALVLYGLL----PVVQNTVAGLGTVPPQTLEAARGNGMSAWQILWHIELPLAM 176

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
              V G   +        I++   +     +  T LG  I       + P V+ G L++ 
Sbjct: 177 RVIVAGVRVS-------VIINIGTATIGSTVGATTLGTPIIAGLVGNNLPYVIQGALLVG 229

Query: 564 CFVLALN 570
              +  +
Sbjct: 230 LLAIVTD 236


>gi|308174288|ref|YP_003920993.1| phosphate ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607152|emb|CBI43523.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
 gi|328554234|gb|AEB24726.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           TA208]
 gi|328912631|gb|AEB64227.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           LL3]
          Length = 309

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 79/211 (37%), Gaps = 24/211 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  V+S L         A             VL P+++++  IP + +    LT  V +
Sbjct: 93  FAVTVLSALIAAPLGIAGAVFMTEIAPTWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +        + LA    +    +  +T     +L ++P+ L + S +   + WQ    
Sbjct: 153 IGSFKSSGTGHSLLAGTIVLSVMILPTITSISADALASLPKHLRDGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +P + P L+  +++ M+  +   +A +M++                 T I    +G  
Sbjct: 213 VLIPAAFPTLLTAVVLGMARAFGEALAVQMVIGNTKLLPESLLDTAGTLTTIITLNMGHT 272

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              +I+   L ++   +L M  +  L  + L
Sbjct: 273 TYGSIENNTLWSMGLVLLIMSFLFILLIRYL 303



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + +++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTVLSALIAAPLGIAGAVFMTEIAPTWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           + S  S    +  L  ++++       I        ++ P   ++ + +   T W+  R 
Sbjct: 153 IGSFKSSGTGHSLLAGTIVLSVMILPTITSISADALASLPKHLRDGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--------------GAY 542
           +++P  FP  +T  +     A+  ++  ++       L  + L              G  
Sbjct: 213 VLIPAAFPTLLTAVVLGMARAFGEALAVQMVIGNTKLLPESLLDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +LIM    + L R+L
Sbjct: 273 TYGSIENNTLWSMGLVLLIMSFLFILLIRYL 303


>gi|226308289|ref|YP_002768249.1| phosphate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|229488740|ref|ZP_04382606.1| phosphate ABC transporter, permease protein PstA [Rhodococcus
           erythropolis SK121]
 gi|226187406|dbj|BAH35510.1| phosphate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|229324244|gb|EEN89999.1| phosphate ABC transporter, permease protein PstA [Rhodococcus
           erythropolis SK121]
          Length = 302

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 76/187 (40%), Gaps = 9/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR---DIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +    LV  +  ++  G+   T P    + +  +  + D   +      T L+ +   V 
Sbjct: 38  IALIPLVWVLFTVIAKGLPALTSPTWFTNSLSGLTASADGGGIYHALIGTLLQGIVCAVF 97

Query: 79  SLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           S+      A      A +  +LG +   ++DI+  +P +    F    ++  +      +
Sbjct: 98  SIPLGIFVAIYLVEYADRKSKLGKLTTFMVDILSGVPSIVAALFIYALWIATF--GFPKS 155

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A   A+    V  +  S  + L  +P DL E S +  +  W+    + +P ++PG++ 
Sbjct: 156 AFAVSLALVLLMVPVVIRSTEEMLRIVPMDLREASYALGVPKWKTISKIVLPTALPGIIT 215

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 216 GVMLALA 222



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 395 IIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYY 444
           I+ ++  IP+GI++             +         +L+  P+     F   +   ++ 
Sbjct: 92  IVCAVFSIPLGIFVAIYLVEYADRKSKLGKLTTFMVDILSGVPSIVAALFIYALWIATFG 151

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +SL ++      ++ +        P D +E + +  +  W+    I+LP   P
Sbjct: 152 FPKSAFAVSLALVLLMVPVVIRSTEEMLRIVPMDLREASYALGVPKWKTISKIVLPTALP 211

Query: 505 YYVTGAITAC 514
             +TG + A 
Sbjct: 212 GIITGVMLAL 221


>gi|198276981|ref|ZP_03209512.1| hypothetical protein BACPLE_03188 [Bacteroides plebeius DSM 17135]
 gi|198270506|gb|EDY94776.1| hypothetical protein BACPLE_03188 [Bacteroides plebeius DSM 17135]
          Length = 265

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 95/257 (36%), Gaps = 8/257 (3%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           +  +   F+SRR +   + + + + VI  + +++         R  ++     L      
Sbjct: 1   MNKLRLFFLSRRSWTLPYLIFSVIFVIVPLLLIVVYAFTDDAGRMTLENFRKFLAHPEAV 60

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                +    +   +  ++  +  A + ++S       + +L I+   P+   +    + 
Sbjct: 61  NTFIYSIGIAILTTIGCIVLGYPAAWILSRSNSSYSRTLILLFIL---PMWVNILIRTLA 117

Query: 123 FMNLYP-GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            + L+    +   E A IF +  + +  M + +Y +L  +     E ++    + +Q FW
Sbjct: 118 TVALFDFASLPLGEGALIFGMIYNFIPFMIYPIYNTLQKMDPSYVEAAQDLGANSFQVFW 177

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P SMPG+V  +MM           +E++ + +  +     G+ I   I        
Sbjct: 178 KVVFPLSMPGVVSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYG 233

Query: 242 LYAMLTMLGVIFLYDQL 258
               L ML +I      
Sbjct: 234 AALSLIMLFLIAATSLF 250


>gi|295837274|ref|ZP_06824207.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
 gi|295826444|gb|EFG64860.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
          Length = 243

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 70/188 (37%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L     R  L  + ++ I L      A LA + +     ++ +  I+ +IP L   + 
Sbjct: 23  HELTDATVRHVLITVVSVAIGLAVALPLALLARRYKAFAGPVLGLTTILYTIPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F          +    +  +    +  +  ++   L  +P +  E +R      W+
Sbjct: 83  LLPVFGL--------SPALVVTGLVLYSLTILVRNILAGLEAVPEEAREAARGMGYGSWR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             W + +P ++P ++  + ++        V++  +     ++   G+GS I   +     
Sbjct: 135 LLWEVELPLALPAVLGGVRIA-------TVSTVALTTVGAIVDYGGLGSLILDGLDTTFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AQVLAASV 195



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 11/152 (7%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
                +  +     +L   P+   F L++       L+P L ++ L+++ +   ++ N++
Sbjct: 56  RYKAFAGPVLGLTTILYTIPSLAMFSLLLPVFG---LSPALVVTGLVLY-SLTILVRNIL 111

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG  A P + +E A       WR    + LP   P  + G   A       + V  +  +
Sbjct: 112 AGLEAVPEEAREAARGMGYGSWRLLWEVELPLALPAVLGGVRIATVSTVALTTVGAIVDY 171

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           G       GLG+ I +  +     +V+   ++
Sbjct: 172 G-------GLGSLILDGLDTTFKAQVLAASVL 196


>gi|261349580|ref|ZP_05974997.1| phosphate ABC transporter, permease protein PstC
           [Methanobrevibacter smithii DSM 2374]
 gi|288861538|gb|EFC93836.1| phosphate ABC transporter, permease protein PstC
           [Methanobrevibacter smithii DSM 2374]
          Length = 291

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 5/206 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF +LAF++   I     +G                      +      T L ++ A+ +
Sbjct: 26  IFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEGQFGVFPMIIGSIFVTLLSLVIAVPL 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SLL       +A    ++ ++L P++  +  IP + +  F +   + +      G   + 
Sbjct: 86  SLLCAIFIEEIA--PDKIKLLLKPVIQTLSGIPSVVYGFFGLTLLVPVVRQHFGGTGFSV 143

Query: 139 IFA--IFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A  I +  +     S+ Q ++  +P +  E +     + WQ   ++  P ++PG++  
Sbjct: 144 FTAALILSVMILPTIISVSQDAIKAVPGEYREAALGLGSTHWQTIRHIIFPSALPGIITA 203

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIP 221
           +++ +       +A  M+      IP
Sbjct: 204 VILGIGRAIGETLAVIMVAGNVAQIP 229



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 62/152 (40%), Gaps = 13/152 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSC 440
           + + +++ +I +P+ +             I   ++P  Q L+  P+ V+      L+V  
Sbjct: 72  IFVTLLSLVIAVPLSLLCAIFIEEIAPDKIKLLLKPVIQTLSGIPSVVYGFFGLTLLVPV 131

Query: 441 VS--YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYI 497
           V   +     +++ + L++       + +V      A P +++E A     T W+  R+I
Sbjct: 132 VRQHFGGTGFSVFTAALILSVMILPTIISVSQDAIKAVPGEYREAALGLGSTHWQTIRHI 191

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           I P   P  +T  I   G A   ++   + + 
Sbjct: 192 IFPSALPGIITAVILGIGRAIGETLAVIMVAG 223


>gi|238794101|ref|ZP_04637718.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           intermedia ATCC 29909]
 gi|238726606|gb|EEQ18143.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           intermedia ATCC 29909]
          Length = 239

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 20/199 (10%)

Query: 75  AMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + +I++L          + +      V+  ++ + Q+ P +  L   V            
Sbjct: 46  SSIIAVLIGVSAGIAVTRPKGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG-------- 97

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E  AI A+    +  +       + ++ R + EV+    +S  Q  W + +P + P +
Sbjct: 98  FSEKPAIIALVLYGLLPILQGTITGIESVSRGIHEVAEGVGMSARQILWQVELPLAAPVI 157

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  +  S+        A+    VG        +GS I + +   +   ++   + +  + 
Sbjct: 158 VAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAVVVALLA 210

Query: 253 FLYDQLL---FRPMIVWSN 268
            + D +     R +  W  
Sbjct: 211 IITDMIFARWARRLSRWRE 229



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 16/193 (8%)

Query: 395 IIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           IIA +I +  GI +         S ++    +   FP      + V  + +      + L
Sbjct: 48  IIAVLIGVSAGIAVTRPKGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKPAIIAL 107

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L  +      IL   I G  +      EVA    ++  +    + LP   P  V G  T
Sbjct: 108 VLYGLL----PILQGTITGIESVSRGIHEVAEGVGMSARQILWQVELPLAAPVIVAGIRT 163

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +       + ++         + T  LG+ I       +   V+ G +++    +  +  
Sbjct: 164 SVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAVVVALLAIITDMI 216

Query: 573 L--W-HPLYLYGT 582
              W   L  +  
Sbjct: 217 FARWARRLSRWRE 229


>gi|116250282|ref|YP_766120.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115254930|emb|CAK06004.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 388

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 68/189 (35%), Gaps = 9/189 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L    ++ I+++       L     +L  +++  L ++Q+IP L      ++   
Sbjct: 181 AISHLLLAFGSLAIAIVLGLPLGILCFWVPKLRAIVLQCLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           WQ    + +P + P ++  + + +        +A+ +   G  +    G+G      +  
Sbjct: 301 WQILTGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYA 244
             +  + +A
Sbjct: 361 GAVPTVFFA 369



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA ++ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLAFGSLAIAIVLGLPLGILCFWVPKLRAIVLQCLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T W+  
Sbjct: 245 HVPLAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRWQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 TGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|119511215|ref|ZP_01630331.1| permease protein of ABC transporter [Nodularia spumigena CCY9414]
 gi|119464093|gb|EAW45014.1| permease protein of ABC transporter [Nodularia spumigena CCY9414]
          Length = 210

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 51/140 (36%), Gaps = 5/140 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + Q+       +  A+  + L       L  +   L   ++ I +I+Q+IP L      
Sbjct: 12  EILQHTLEHLFMVSIAIATATLIGIPLGILITRQTHLRQPILGIANILQTIPSLALFGLL 71

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +   +    G V      AI A+       +  + Y  +  +   + E  R   ++  Q 
Sbjct: 72  IPVPIIGGIGVVP-----AIVALTLYSFLPIIRNTYTGIMGVDPAIREAGRGMGMTDKQL 126

Query: 180 FWYLGVPFSMPGLVWNMMMS 199
              + +P +M  ++  + ++
Sbjct: 127 LLQVDIPLAMGVILAGVRVA 146



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F V + I  A++I IP+GI I  + H+   I   A +L   P+   F L++       +
Sbjct: 21  LFMVSIAIATATLIGIPLGILITRQTHLRQPILGIANILQTIPSLALFGLLIPVPIIGGI 80

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +  L ++ +   I+ N   G        +E      +T  +    + +P      
Sbjct: 81  GVVPAIVALTLY-SFLPIIRNTYTGIMGVDPAIREAGRGMGMTDKQLLLQVDIPLAMGVI 139

Query: 507 VTGAITA 513
           + G   A
Sbjct: 140 LAGVRVA 146


>gi|87198635|ref|YP_495892.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium aromaticivorans DSM 12444]
 gi|87134316|gb|ABD25058.1| binding-protein-dependent transport systems inner membrane
           component [Novosphingobium aromaticivorans DSM 12444]
          Length = 271

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 86/251 (34%), Gaps = 29/251 (11%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS---------------LPQYASRTTL 70
           +L + +I + +   +    P D +  +P  +                          +  
Sbjct: 21  ILALVLIYLFVAAQRHAANPMDKILPLPAGMASAMSSLLFEVDPLSGQYLFWADTLASLQ 80

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           R+   + I+     +   +      L   + P++  +  IP +  L    +         
Sbjct: 81  RLGLGLGIATAMALLVGLVLGVLPPLRATIGPLVTGIAVIPPIALLPILFIALGLG---- 136

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               E A +  I       M   +   + ++PR+    + +   S WQ    + +P +MP
Sbjct: 137 ----ETAKVALIVIGIAPVMVRDIASHVGDLPREQIVKALTLGASSWQIMIRVALPQAMP 192

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+  + +++   W F++++E I          G+G  I L  +   +  I+  +  +  
Sbjct: 193 RLIHAVRLALGPAWVFLISAEAIA------SDVGLGYRIFLVRRYLSMDVIIPYVAWIAL 246

Query: 251 VIFLYDQLLFR 261
           +  + D  L R
Sbjct: 247 LAIVMDVALAR 257



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 10/224 (4%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +  +  G+A      +                  ++ R+ + + IA+ + + VG+ +G  
Sbjct: 44  ILPLPAGMASAMSSLLFEVDPLSGQYLFWADTLASLQRLGLGLGIATAMALLVGLVLGVL 103

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P + + I P    +A  P     P++   +             L++ G    ++ ++ + 
Sbjct: 104 PPLRATIGPLVTGIAVIPPIALLPILFIALGLGET----AKVALIVIGIAPVMVRDIASH 159

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P +    A +   + W+    + LP   P  +     A G AW   I +E  +   
Sbjct: 160 VGDLPREQIVKALTLGASSWQIMIRVALPQAMPRLIHAVRLALGPAWVFLISAEAIA--- 216

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 GLG  I       S   ++  V  +    + ++  L  
Sbjct: 217 ---SDVGLGYRIFLVRRYLSMDVIIPYVAWIALLAIVMDVALAR 257


>gi|84684962|ref|ZP_01012862.1| phosphate ABC transporter, permease protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667297|gb|EAQ13767.1| phosphate ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 443

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 62/189 (32%), Gaps = 4/189 (2%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N  D   F +V  + +  +             D      +   +      +   M   + 
Sbjct: 173 NNIDAAHFDVVDALRDAGIIAKGFNFDFITGADASESRPEQAGIGVSMLGSLFMMFVVLG 232

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +SL      +      A   R   ++   +  + ++P + F    +  F+  +      A
Sbjct: 233 LSLPIGVAASIYLEEFATQNRFTDIIEVNISNLAAVPSIVFGILGLAVFIQ-FMHLPQSA 291

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L     +    +  +  S   SL  +P  + E +     S  Q  ++  +P +MPG++ 
Sbjct: 292 PLVGGLVLTLMTLPTIIISTRASLKAVPPSIREAALGIGASKMQTVFHHVLPLAMPGILT 351

Query: 195 NMMMSMSGG 203
             ++ ++  
Sbjct: 352 GTIIGLAQA 360



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 6/211 (2%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           +    R  G ++       +   +N   ++   +        +A G  +  I       +
Sbjct: 150 ILAASRVDGYLKGRVTRESVARDNNIDAAHFDVVDALRDAGIIAKGFNFDFITGADASES 209

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFP 429
             +   +      ++F + V++ ++  I +   I++     +   +  I+     LAA P
Sbjct: 210 RPEQAGIGVSMLGSLFMMFVVLGLSLPIGVAASIYLEEFATQNRFTDIIEVNISNLAAVP 269

Query: 430 ANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + VF  L ++    +   P    L   L++   T   I+ +  A   A P   +E A   
Sbjct: 270 SIVFGILGLAVFIQFMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIREAALGI 329

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             +  +   + +LP   P  +TG I     A
Sbjct: 330 GASKMQTVFHHVLPLAMPGILTGTIIGLAQA 360


>gi|307544959|ref|YP_003897438.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216983|emb|CBV42253.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 247

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 71/201 (35%), Gaps = 21/201 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL----DIMQSIPILGFLTFTV 120
             R  L +  A ++++L         A +R  G   +P++     I Q+ P +  L   V
Sbjct: 57  LGRHLLVVGVAALLAILLGV--GAAVAVTRPGGRDFLPLVGQLASIGQTFPPVAVLALAV 114

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                          L  I A+    +  +  +    L  I   + E +R   ++G Q+ 
Sbjct: 115 PVLG--------FGTLPIIVALLLYGLLPIVRNTLAGLEGIDPGVTEAARGMGMTGGQRL 166

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  +  S++       A+    VG +      +G  I   I   +   
Sbjct: 167 RQVELPLAAPVILAGIRTSVTI--NIATAAIGATVGASN-----LGDPIISGIVNGNTAY 219

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           +L   L +  +    D L  R
Sbjct: 220 VLQGALLIGLLALCVDSLFAR 240



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +  S++R  ++  + W  ++    +G+      + +     Q V+Y      + + R ++
Sbjct: 3   RSLSSRRYGWLAPLVWLALLLLACLGMERLEGLFRLVEPDSQAVIYERADFLVLLGRHLL 62

Query: 393 LIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHL 446
           ++ +A+++ I +G+   +           P    LA+     P      L V  + +  L
Sbjct: 63  VVGVAALLAILLGVGAAVAVTRPGGRDFLPLVGQLASIGQTFPPVAVLALAVPVLGFGTL 122

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      I+ N +AG         E A    +TG +  R + LP   P  
Sbjct: 123 PIIVALLLYGLL----PIVRNTLAGLEGIDPGVTEAARGMGMTGGQRLRQVELPLAAPVI 178

Query: 507 VTGAITAC 514
           + G  T+ 
Sbjct: 179 LAGIRTSV 186


>gi|282865703|ref|ZP_06274753.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282559347|gb|EFB64899.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 225

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 54/153 (35%), Gaps = 6/153 (3%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
             +           +     +     +  ++IS       A +     + G + V I +I
Sbjct: 9   SWLTTSAHWYGADGIWTRLGQHLFLTVVCLLISCALALPVALVLGHLGKGGALAVNISNI 68

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +++P    L   ++             +   + A+    +  +  + Y  +  +  D+ 
Sbjct: 69  GRAVPTFAVLVLLLL------TPIGSSGQWPTVIALVLFSIPPLLTNAYVGMREVDPDVV 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +R   ++GWQ    + +P ++P ++  + ++
Sbjct: 123 RAARGMGMTGWQMLRRVELPLALPLVLTGVRIA 155



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 2/128 (1%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  VV ++I+  + +PV + +G      +     + +  A P      LV+  ++    
Sbjct: 31  LFLTVVCLLISCALALPVALVLGHLGKGGALAVNISNIGRAVPTFAV--LVLLLLTPIGS 88

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +      + ++  +   +L N   G      D    A    +TGW+  R + LP   P  
Sbjct: 89  SGQWPTVIALVLFSIPPLLTNAYVGMREVDPDVVRAARGMGMTGWQMLRRVELPLALPLV 148

Query: 507 VTGAITAC 514
           +TG   A 
Sbjct: 149 LTGVRIAA 156


>gi|29828726|ref|NP_823360.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605830|dbj|BAC69895.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 240

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 75/187 (40%), Gaps = 14/187 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++  LL       L  + R L   ++ +  ++ +IP L F    + Y          
Sbjct: 27  LLPVLAGLLIALPLGQLCVRFRWLYPPVLGVTTVVYAIPSLAFFVVLIDYTGQ------- 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E+  +  +    +  +  ++   + ++P++    + +      +++  + +P ++P +
Sbjct: 80  -SEITVMIPLALYSLVLLVPAIVDGVRSVPQETLAAATAMGFGPVRRYVQVQLPIAVPAI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++       V +  ++ VG  +     +G+ +A A+        + +++T   + 
Sbjct: 139 IAGLRVA------TVSSISLVSVGTLIGNQGALGNLLADAMFYHRPALAVNSVVTTAVLA 192

Query: 253 FLYDQLL 259
            L D  L
Sbjct: 193 ILMDAAL 199



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           + L  + +   ++ ++   +I +P+G        +   +     ++ A P+  FF     
Sbjct: 16  LGLIGLHLKEALLPVLAGLLIALPLGQLCVRFRWLYPPVLGVTTVVYAIPSLAFF----V 71

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +  Y     + + + +   +   ++  ++ G  + P +    A++      R +  + L
Sbjct: 72  VLIDYTGQSEITVMIPLALYSLVLLVPAIVDGVRSVPQETLAAATAMGFGPVRRYVQVQL 131

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G   A   + +   V  +            LG  +A++         V  V
Sbjct: 132 PIAVPAIIAGLRVATVSSISLVSVGTLIGNQGA------LGNLLADAMFYHRPALAVNSV 185

Query: 560 LIMCCFVLALN 570
           +      + ++
Sbjct: 186 VTTAVLAILMD 196


>gi|218681475|ref|ZP_03529362.1| putative sulfonate ABC transporter, permease protein
           (ssuC/ycbM-like) [Rhizobium etli CIAT 894]
          Length = 127

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           ++  + R + EV R FRLSG +    + +P  +P  V  +   +  GW FVVA+E +   
Sbjct: 13  AVVGVDRRIVEVGRVFRLSGLELIRLILLPAVLPDYVLALRAGLGLGWMFVVAAEFMGAS 72

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268
           +      G+G  +    +      IL A+L    V    D LL     P + W +
Sbjct: 73  E------GLGYLLVDGQQLGKPDQILAAILIFAIVGKATDSLLLIATTPFLRWRD 121



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 6/103 (5%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     EV   F ++G    R I+LP + P YV       G  W   + +E     
Sbjct: 13  AVVGVDRRIVEVGRVFRLSGLELIRLILLPAVLPDYVLALRAGLGLGWMFVVAAEFMG-- 70

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                + GLG  + +  + G   +++  +LI      A +  L
Sbjct: 71  ----ASEGLGYLLVDGQQLGKPDQILAAILIFAIVGKATDSLL 109


>gi|52081034|ref|YP_079825.1| phosphate ABC transporter permease [Bacillus licheniformis ATCC
           14580]
 gi|52786411|ref|YP_092240.1| hypothetical protein BLi02675 [Bacillus licheniformis ATCC 14580]
 gi|319645009|ref|ZP_07999242.1| PstC protein [Bacillus sp. BT1B_CT2]
 gi|52004245|gb|AAU24187.1| phosphate ABC transporter (permease) [Bacillus licheniformis ATCC
           14580]
 gi|52348913|gb|AAU41547.1| PstC [Bacillus licheniformis ATCC 14580]
 gi|317392818|gb|EFV73612.1| PstC protein [Bacillus sp. BT1B_CT2]
          Length = 309

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 76/187 (40%), Gaps = 10/187 (5%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLG 97
            P + +  +       +    A    L   +  +++ L         A            
Sbjct: 64  SPIEFLTSLDWNPTNENPEYGALPFILGSFAVTLLASLIAAPLGIGGAIFMTEIAPSWGR 123

Query: 98  MVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
            VL P+++++  IP +  GF+  TV+  F++ +     G  L A   +    +     S+
Sbjct: 124 KVLQPVVELLVGIPSVVYGFIGLTVLVPFISQFKSSGSGHSLLAGTIVLAVMILPTVTSI 183

Query: 155 -YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
              +L ++P++L E S +   + WQ    + +P ++P L+  +++ M+  +   +A +M+
Sbjct: 184 STDALMSLPKNLREGSYALGATRWQTIRKVLIPAALPSLLTAVVLGMARAFGEALAVQMV 243

Query: 214 VVGDTVI 220
           +     +
Sbjct: 244 IGNSRNL 250



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGI--WIGFR----PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + ++AS+I  P+GI   I             +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTLLASLIAAPLGIGGAIFMTEIAPSWGRKVLQPVVELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       +         + P + +E + +   T W+  R 
Sbjct: 153 ISQFKSSGSGHSLLAGTIVLAVMILPTVTSISTDALMSLPKNLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--------------GAY 542
           +++P   P  +T  +     A+  ++  ++      +L  + L              G  
Sbjct: 213 VLIPAALPSLLTAVVLGMARAFGEALAVQMVIGNSRNLFESLLDPAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +LIM    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLIMSFLFILLIRYL 303


>gi|110667924|ref|YP_657735.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [Haloquadratum walsbyi DSM 16790]
 gi|109625671|emb|CAJ52103.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           protein [Haloquadratum walsbyi DSM 16790]
          Length = 274

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 77/192 (40%), Gaps = 13/192 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T  R++   +IS++    +  +    + +   L   L ++ ++P + +    V++     
Sbjct: 74  TITRVVMGFIISMVLATFWGVIMGVQQSITDYLAGPLFVLLTVPSVVWAFVGVLWLGLTE 133

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +   +  +F   T+ +W       +   ++  +L +++ ++       +  + +P 
Sbjct: 134 FAVPVLVIVLIVFPYLTAIIW-------EGTRDLSENLLKMATAYDARSSHIWRDIYLPH 186

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             P L   M + ++  W   + +E+           G+G  +    +  D   ++   + 
Sbjct: 187 IKPVLFGAMRVGLAVSWKLALVAEVFGTAT------GVGVAVNYHFEAFDTGMVIAWAIP 240

Query: 248 MLGVIFLYDQLL 259
           ++GV+ + D+LL
Sbjct: 241 VIGVMIIADRLL 252



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 9/199 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ RVV+  II+ ++    G+ +G +  I+  +     +L   P+ V+  + V  +    
Sbjct: 74  TITRVVMGFIISMVLATFWGVIMGVQQSITDYLAGPLFVLLTVPSVVWAFVGVLWLGLTE 133

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + + +L++F     I+     G      +  ++A+++       WR I LP I P 
Sbjct: 134 FAVPVLVIVLIVFPYLTAII---WEGTRDLSENLLKMATAYDARSSHIWRDIYLPHIKPV 190

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                      +W  ++V+EV          TG+G  +    E      V+   + +   
Sbjct: 191 LFGAMRVGLAVSWKLALVAEVFG------TATGVGVAVNYHFEAFDTGMVIAWAIPVIGV 244

Query: 566 VLALNRFLWHPLYLYGTRC 584
           ++  +R L    +    + 
Sbjct: 245 MIIADRLLRWSEHRAAQKR 263


>gi|84686014|ref|ZP_01013910.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Maritimibacter alkaliphilus HTCC2654]
 gi|84666107|gb|EAQ12581.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacterales bacterium HTCC2654]
          Length = 287

 Score = 63.4 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G IT+   ++     + + I + + I     +   + P+A      P     P++
Sbjct: 82  SLIFHGWITLSATMLGFAFGTGLGILLAVGIVHSRAMDMGVMPWAIASQTIPILAIAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  +S   +   +  +++  + + + ++  ++ G  +      ++  ++  +  + +  +
Sbjct: 142 IVVLSSLGVTGIIPKAIISAYLSFFPVVVGMVKGLRSPAAFDLDLMKTYSASRSQTFWKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           A   +IV E+ +         GLGA +   +  G   ++ 
Sbjct: 202 RLPASMPYLFASLKVGIAAALVGTIVGELPTGA-----IRGLGARMLSGSYYGQTVQIW 255



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    +           + A     SR + M ++P     Q+IPIL  
Sbjct: 78  TSKRSLIFHGWITLSATMLGFAFGTGLGILLAVGIVHSRAMDMGVMPWAIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   +L    +I   + + +  F    + +   M + L +      ++ +++  S
Sbjct: 138 APMIIVVLSSLGVTGIIPKAIISAYLSF----FPVVVGMVKGLRSPAAFDLDLMKTYSAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q FW L +P SMP L  ++ + ++      +  E+         + G+G+ +      
Sbjct: 194 RSQTFWKLRLPASMPYLFASLKVGIAAALVGTIVGEL-----PTGAIRGLGARMLSGSYY 248

Query: 236 QDLLAIL 242
              + I 
Sbjct: 249 GQTVQIW 255


>gi|116253462|ref|YP_769300.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258110|emb|CAK09211.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 375

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 66/180 (36%), Gaps = 9/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++  I+  +    V +       +   + P   +++A P     P++V    +   +  
Sbjct: 184 VLIGYIVGCLSGFVVAVLADRIAFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSK- 242

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N +AG +A  +  +++  ++    W+    + LP   P+    
Sbjct: 243 ---AAVVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASGYWQTLLKLRLPAAMPFIFNA 299

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E      +     G+G  I+    + +   V   + +        
Sbjct: 300 LKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEIGRMNVDMVWAEIAVAALAGSIF 354



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF     +L   +             P  I      +L +  L     +T  + 
Sbjct: 126 QLLIPAIFGAWILILWEAVTRGAGVPFILLPPPSAIGARFMASLPI--LGADVRQTIFKA 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   ++  L  FV A LA +   L   L+PI +++ ++PI+G     V++F   +P K 
Sbjct: 184 VLIGYIVGCLSGFVVAVLADRIAFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++    WQ    L +P +MP 
Sbjct: 244 A--------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASGYWQTLLKLRLPAAMPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  I   ++  +++A + +  +
Sbjct: 296 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVD-MVWAEIAVAAL 349


>gi|315037594|ref|YP_004031162.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           amylovorus GRL 1112]
 gi|325956076|ref|YP_004286686.1| phosphate ABC transporter permease PstC [Lactobacillus acidophilus
           30SC]
 gi|312275727|gb|ADQ58367.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           amylovorus GRL 1112]
 gi|325332641|gb|ADZ06549.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           acidophilus 30SC]
          Length = 331

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  +++ L    +A   A       S++    L  + +++  IP + +    LT  V  
Sbjct: 116 FAVTLLAALIATPFAIAIALFMTEYSSKKGANFLQSVTELLVGIPSVVYGFLGLTIIVPA 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             NL+ G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  ++
Sbjct: 176 IRNLFGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGATHWQTIYH 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +               + +     + ++A++I  P  I I            ++
Sbjct: 88  VFHFLTSTDWDPGEGKNHVGAAVMIVTSFAVTLLAALIATPFAIAIALFMTEYSSKKGAN 147

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 148 FLQSVTELLVGIPSVVYGFLGLTIIVPAIRNLFGGTGFGILAATLVLFVMVLPTITSLTV 207

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+ F++ + +   T W+   +++L    P  +T  I     A+  ++  ++   
Sbjct: 208 DSLKAVPSHFRKASMALGATHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIG 267

Query: 530 GHIHL 534
             + +
Sbjct: 268 NAVLM 272


>gi|312793348|ref|YP_004026271.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180488|gb|ADQ40658.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 217

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 10/147 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L     +T   ++ + +++ +F      L          ++  L  ++  I++I +SIP 
Sbjct: 8   LLISTWQTIYMVIISTLLATIFGVPLGVLLLVTDKGQILQNSILNKIVSTIVNIFRSIP- 66

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  GK IG   AAI  +  + +  M      +L  + R + E +++ 
Sbjct: 67  FVILLIVLMPFTRLIVGKSIGTT-AAIVPLSIAAIPFMGRITETALREVDRGVIEAAQAM 125

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             S +Q    + +P ++P +V  + ++
Sbjct: 126 GASPFQIITKVLIPEALPSIVSGITIT 152



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V++  ++A+I  +P+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVIISTLLATIFGVPLGVLLLVTDKGQILQNSILNKIVSTIVNIFRSIPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++  +  ++  +   I F                 E A +   + ++  
Sbjct: 74  LMPFTRLIVGKSIGTTAAIVPLSIAAIPFMGRITETALREVDRGVIEAAQAMGASPFQII 133

Query: 495 RYIILPGIFPYYVTGAITAC 514
             +++P   P  V+G     
Sbjct: 134 TKVLIPEALPSIVSGITITA 153


>gi|291288336|ref|YP_003505152.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
 gi|290885496|gb|ADD69196.1| binding-protein-dependent transport systems inner membrane
           component [Denitrovibrio acetiphilus DSM 12809]
          Length = 239

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 70/199 (35%), Gaps = 21/199 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTV 120
           A    L + S+   + +           +RR G   +P+++++    Q+ P +  L   V
Sbjct: 48  ALEHILLVGSSSFAAAVTGVALGVFV--TRRAGRSFLPVVNMLASVGQTFPPVAVLALAV 105

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                             + A+F   ++ +  +    + ++ +D+ + +R   +   +  
Sbjct: 106 PLVG--------FGREPTVIALFCYGIFPIVRNTITGIESVDKDIRDAARGVGMYDREVL 157

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + + +P +   ++  +  S       V+ +         I   G G+ I   +   +   
Sbjct: 158 FRVELPLAASIIIAGIRTS-------VIINIGTATIGATIGAGGFGAPIISGLINNNFYF 210

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L   + +  +    DQ+ 
Sbjct: 211 VLQGGICVALLAIFSDQIF 229



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 21/236 (8%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY----VIWLGCITMFRVVVLIIIASIIW 401
           I +  V+  +A+G      G     F+ + VLY     + L    +  V      A++  
Sbjct: 7   IAFTGVLFLLAVGSLSIMKGSSGGGFSSEQVLYGRSSFLTLALEHILLVGSSSFAAAVTG 66

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           + +G+++           P   +LA+    FP      L V  V +        +  L  
Sbjct: 67  VALGVFV--TRRAGRSFLPVVNMLASVGQTFPPVAVLALAVPLVGFGR---EPTVIALFC 121

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +G  + I+ N I G  +   D ++ A    +        + LP      + G  T+    
Sbjct: 122 YG-IFPIVRNTITGIESVDKDIRDAARGVGMYDREVLFRVELPLAASIIIAGIRTSVIIN 180

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + +      G       G GA I       +F  V+ G + +    +  ++  
Sbjct: 181 IGTATIGATIGAG-------GFGAPIISGLINNNFYFVLQGGICVALLAIFSDQIF 229


>gi|118472643|ref|YP_887244.1| permease membrane component [Mycobacterium smegmatis str. MC2 155]
 gi|118173930|gb|ABK74826.1| permease membrane component [Mycobacterium smegmatis str. MC2 155]
          Length = 260

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 74/250 (29%), Gaps = 18/250 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P+        +  S +    W          +A   +   V   +  +   +     +T+
Sbjct: 6   PDTERVALPAEPSSRLGLGRWLIQPLVCVAAVAGSLLYVEVADVSESERRALGIGNLLTL 65

Query: 388 FR-----VVVLIIIASIIWIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            R      V   ++  ++ IP+GI +  G     +  I   A    A PA     L    
Sbjct: 66  LREHMVISVAATVLTCVLAIPLGIALTRGSMRRYAKPIITVAGFGQAAPAIGLIALGAVL 125

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                      L++         I+ N + G         E A    ++ +     + LP
Sbjct: 126 FGIGTTGSIAALTVYGAL----PIIANTVIGLDGVDPRLVEAARGMGMSSFSALLKVELP 181

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
                 V G  TA       + ++     G       GLG  I           +V+G +
Sbjct: 182 LALRVIVAGVRTALVLIVGTASLAAFTGGG-------GLGQLITVGIRLQQTTTLVVGAI 234

Query: 561 IMCCFVLALN 570
           ++    L ++
Sbjct: 235 LVASLALFID 244



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 22/254 (8%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           LP   S R+    + +   V V  +   LL+         D+ +     L + +L     
Sbjct: 13  LPAEPSSRLGLGRWLIQPLVCVAAVAGSLLYVEVA-----DVSESERRALGIGNLLTLLR 67

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +  ++A V++ +          +   RR    ++ +    Q+ P +G +    V F 
Sbjct: 68  EHMVISVAATVLTCVLAIPLGIALTRGSMRRYAKPIITVAGFGQAAPAIGLIALGAVLFG 127

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G        +I A+       +  +    L  +   L E +R   +S +     + 
Sbjct: 128 IGTTG--------SIAALTVYGALPIIANTVIGLDGVDPRLVEAARGMGMSSFSALLKVE 179

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++  +V  +  ++        AS     G       G+G  I + I+ Q    ++  
Sbjct: 180 LPLALRVIVAGVRTAL--VLIVGTASLAAFTGG-----GGLGQLITVGIRLQQTTTLVVG 232

Query: 245 MLTMLGVIFLYDQL 258
            + +  +    D L
Sbjct: 233 AILVASLALFIDWL 246


>gi|56964354|ref|YP_176085.1| phosphate ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56910597|dbj|BAD65124.1| phosphate ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 295

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 65/154 (42%), Gaps = 6/154 (3%)

Query: 72  MLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +   M+ ++          A   K  R+   +   ++++ S+P +    F ++ F+ L  
Sbjct: 69  LFLTMLFTVPLGLGGGIYMAEYAKPGRVTDFIRTCIEVLASLPSIVVGLFGLLVFVQLTG 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A    +F   V  M   +  ++ ++PR+ +E S +  ++ W     + +P +
Sbjct: 129 WSYSILGGALALTVFNLPV--MVRVVEDAITSVPREQKEASLALGITQWDTIRTVILPAA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            PG++  +++S +G  F   A+ +   G T   L
Sbjct: 187 FPGILTGVILS-AGRVFGEAAALLFTSGVTTPRL 219



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 15/161 (9%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLL 425
              +Y+    +      + + + + ++    + +  GI++        ++  I+   ++L
Sbjct: 48  PPSSYRAGGGIGPQLFNSFYILFLTMLFTVPLGLGGGIYMAEYAKPGRVTDFIRTCIEVL 107

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPND 478
           A+ P+     +VV              S  ++ G     +FN       V    ++ P +
Sbjct: 108 ASLPS-----IVVGLFGLLVFVQLTGWSYSILGGALALTVFNLPVMVRVVEDAITSVPRE 162

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            KE + +  IT W   R +ILP  FP  +TG I + G  + 
Sbjct: 163 QKEASLALGITQWDTIRTVILPAAFPGILTGVILSAGRVFG 203


>gi|295425593|ref|ZP_06818280.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus amylolyticus DSM 11664]
 gi|295064609|gb|EFG55530.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus amylolyticus DSM 11664]
          Length = 331

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  +++ +    +A  AA       S++    L  +++++  IP + +    LT  V  
Sbjct: 116 FAVTLLAAIVATPFAIAAALFMTEYTSKKGASFLQSVIELLVGIPSVVYGFLGLTIIVPT 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++ G   G  LAA   +F   +  +      +L  +P+   + S +   + WQ    
Sbjct: 176 IRKIFGGTGFGI-LAATLVLFVMVLPTIASLTVDALKAVPKQFRQASFALGATKWQTIHK 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VTLKVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 59/162 (36%), Gaps = 13/162 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
             + ++A+I+  P  I              +S +Q   +LL   P+ V+  L ++ +   
Sbjct: 116 FAVTLLAAIVATPFAIAAALFMTEYTSKKGASFLQSVIELLVGIPSVVYGFLGLTIIVPT 175

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +      +  + L++F      + +  +    A P  F++ + +   T W+    +
Sbjct: 176 IRKIFGGTGFGILAATLVLFVMVLPTIASLTVDALKAVPKQFRQASFALGATKWQTIHKV 235

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            L    P  +T  I     A+  ++  ++     + +    +
Sbjct: 236 TLKVATPRILTAVIFGMARAFGEALAVQMVIGNAVLMPANLI 277


>gi|298245373|ref|ZP_06969179.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297552854|gb|EFH86719.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 222

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 11/150 (7%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L+ A P   F   V+  +        + L +L I      IL N   G  +      + A
Sbjct: 60  LMRAIPIIAFLIAVLPYLGLGFTPAAVALIILGIP----PILLNTYTGLRSIDAAMIDAA 115

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
               +T W+  R +  P + P    G  T+       + ++             G G YI
Sbjct: 116 RGMGMTTWQIIRRVQAPLVMPIIAAGIRTSAIQIIATATLAAFIG-------ADGYGVYI 168

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            +   K    E++ G + +    L +  F+
Sbjct: 169 VDGLYKLDNTEILAGAIPVAIIALIVEGFM 198



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 74/185 (40%), Gaps = 15/185 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +VI+++       + ++S  LG + + +  +M++IPI+ FL   + Y    +       
Sbjct: 29  TIVIAIVIGVGLGVVVSRSAILGFIAINLSGLMRAIPIIAFLIAVLPYLGLGFTP----- 83

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+    +  +  + Y  L +I   + + +R   ++ WQ    +  P  MP +  
Sbjct: 84  ---AAVALIILGIPPILLNTYTGLRSIDAAMIDAARGMGMTTWQIIRRVQAPLVMPIIAA 140

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  S       ++A+  +      I   G G YI   + + D   IL   + +  +  +
Sbjct: 141 GIRTSAIQ----IIATATLAA---FIGADGYGVYIVDGLYKLDNTEILAGAIPVAIIALI 193

Query: 255 YDQLL 259
            +  +
Sbjct: 194 VEGFM 198


>gi|117928094|ref|YP_872645.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
 gi|117648557|gb|ABK52659.1| binding-protein-dependent transport systems inner membrane
           component [Acidothermus cellulolyticus 11B]
          Length = 255

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 100/247 (40%), Gaps = 21/247 (8%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMVISLLF 82
           +++G+    + G          +      L    D  +LPQ    +     + + I++L 
Sbjct: 19  VLLGVAAWQIVGSHSQPQIFVTLTATLRHLGSMIDDGTLPQALVNSFSVYGAGVGIAILL 78

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             +   L A+ R L +   P +  + + P++  + F +      +  KV+   L  +F +
Sbjct: 79  GALGGLLLARIRVLRVAFEPYIMGLYATPLIALIPFILALLGYRFWPKVVVVFLFCVFPV 138

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
                     +  +   ++  +L EV++ +R S    + ++ +P+++P  +  +  +++ 
Sbjct: 139 L--------LATQRGAQSVAVELMEVAKLYRSSERAIWLHVVIPYTLPFFMTGVRQALAR 190

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLL 259
           G   ++A+++ +  +      G+G  +  A ++     +L  +L +     +     +L+
Sbjct: 191 GLVGMIAADIFLSAN------GLGGLLVSAAQQFSTAEMLAVVLVITVAGLMLMAVGRLV 244

Query: 260 FRPMIVW 266
            +    W
Sbjct: 245 EKYFARW 251



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +    +P+   L A P     P +++ + Y      + + L  +F      L     G
Sbjct: 90  RVLRVAFEPYIMGLYATPLIALIPFILALLGYRFWPKVVVVFLFCVFPV----LLATQRG 145

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A +   +  EVA  +  +    W ++++P   P+++TG   A        I +++     
Sbjct: 146 AQSVAVELMEVAKLYRSSERAIWLHVVIPYTLPFFMTGVRQALARGLVGMIAADIF---- 201

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             L   GLG  +  + ++ S  E++  VL++    L L
Sbjct: 202 --LSANGLGGLLVSAAQQFSTAEMLAVVLVITVAGLML 237


>gi|297544878|ref|YP_003677180.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842653|gb|ADH61169.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 299

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 78/165 (47%), Gaps = 5/165 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   + L  + A++IS       A        +    +L P ++I   IP +  G++ 
Sbjct: 76  LQFILGSVLVSVFAILISAPLGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVG 135

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 136 LTVLVPFISKHFGGLGFSLLAGILVLTVMTLPTITSVSTDAIKSLPVEIREASYALGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           WQ   ++ +P + PG++  +++ ++  +   +A +M++    VIP
Sbjct: 196 WQTIRHVILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIP 240



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++   V  I+I++ + +   I++    +      +QP  ++    P+ V+  + ++ +  
Sbjct: 82  SVLVSVFAILISAPLGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVP 141

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                +  L  +L   +L++       + +V      + P + +E + +   T W+  R+
Sbjct: 142 FISKHFGGLGFSLLAGILVLTVMTLPTITSVSTDAIKSLPVEIREASYALGATRWQTIRH 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP   P  +T  +     A+  ++  ++       +  +
Sbjct: 202 VILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIPKS 242


>gi|86356140|ref|YP_468032.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86280242|gb|ABC89305.1| probable proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 388

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 75/203 (36%), Gaps = 9/203 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L  L ++ I+++       L     RL  +++  L ++Q+IP L      ++   
Sbjct: 181 AFAHLLLALGSLAIAIVLGLPLGILCFWVPRLRAIVLQGLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A++         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLAADIGIRGIGTAPALIALVLYSLLPIVANTVVGLEGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q    + +P + P ++  + + +        +A+ +   G  +    G+G      +  
Sbjct: 301 RQILTGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  + +A  + + +  + D +
Sbjct: 361 GAVPTVFFAFSSAVILDAVIDSI 383



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +  + IA ++ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLALGSLAIAIVLGLPLGILCFWVPRLRAIVLQGLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNL------------WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L               + ++  +   I+ N + G        ++ A+   +T  +  
Sbjct: 245 HVPLAADIGIRGIGTAPALIALVLYSLLPIVANTVVGLEGVDPSVRDAAAGMGLTRRQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 TGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|289578658|ref|YP_003477285.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter italicus Ab9]
 gi|289528371|gb|ADD02723.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter italicus Ab9]
          Length = 299

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 78/165 (47%), Gaps = 5/165 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   + L  + A++IS       A        +    +L P ++I   IP +  G++ 
Sbjct: 76  LQFILGSVLVSVFAILISAPLGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVG 135

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 136 LTVLVPFISKHFGGLGFSLLAGILVLTVMTLPTITSVSTDAIKSLPVEIREASYALGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           WQ   ++ +P + PG++  +++ ++  +   +A +M++    VIP
Sbjct: 196 WQTIRHVILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIP 240



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++   V  I+I++ + +   I++    +      +QP  ++    P+ V+  + ++ +  
Sbjct: 82  SVLVSVFAILISAPLGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVP 141

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                +  L  +L   +L++       + +V      + P + +E + +   T W+  R+
Sbjct: 142 FISKHFGGLGFSLLAGILVLTVMTLPTITSVSTDAIKSLPVEIREASYALGATRWQTIRH 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP   P  +T  +     A+  ++  ++       +  +
Sbjct: 202 VILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIPKS 242


>gi|154686758|ref|YP_001421919.1| YqgH [Bacillus amyloliquefaciens FZB42]
 gi|154352609|gb|ABS74688.1| YqgH [Bacillus amyloliquefaciens FZB42]
          Length = 309

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 24/211 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-F 123
            +  V+S L         A             VL P+++++  IP +  GF+  TV+  F
Sbjct: 93  FAVTVLSALIAAPLGIAGAVFMTEIAPTWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  +     G  L A   + +  +     S+   +L ++P+ L + S +   + WQ    
Sbjct: 153 IGSFKSSGTGHSLLAGTIVLSVMILPTVTSISADALASLPKHLRDGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSY 228
           + +P + P L+  +++ M+  +   +A +M++                 T I    +G  
Sbjct: 213 VLIPAAFPTLLTAVVLGMARAFGEALAVQMVIGNTKLLPESLLDTAGTLTTIITLNMGHT 272

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              +I+   L ++   +L M  +  L  + L
Sbjct: 273 TYGSIENNTLWSMGLVLLIMSFLFILLIRYL 303



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + +++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTVLSALIAAPLGIAGAVFMTEIAPTWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           + S  S    +  L  ++++       +        ++ P   ++ + +   T W+  R 
Sbjct: 153 IGSFKSSGTGHSLLAGTIVLSVMILPTVTSISADALASLPKHLRDGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--------------GAY 542
           +++P  FP  +T  +     A+  ++  ++       L  + L              G  
Sbjct: 213 VLIPAAFPTLLTAVVLGMARAFGEALAVQMVIGNTKLLPESLLDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +LIM    + L R+L
Sbjct: 273 TYGSIENNTLWSMGLVLLIMSFLFILLIRYL 303


>gi|21221377|ref|NP_627156.1| permease membrane protein [Streptomyces coelicolor A3(2)]
 gi|256787442|ref|ZP_05525873.1| permease membrane component [Streptomyces lividans TK24]
 gi|289771340|ref|ZP_06530718.1| ProZL [Streptomyces lividans TK24]
 gi|5531379|emb|CAB51011.1| putative permease membrane component [Streptomyces coelicolor
           A3(2)]
 gi|289701539|gb|EFD68968.1| ProZL [Streptomyces lividans TK24]
          Length = 215

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ L   +   L  +S   G V       + +IP L  +  
Sbjct: 12  QQLLADAYQHASAVFQCMVVATLLGVLIGVLTYRSDWAGNVATLSTSAILTIPSLAMIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          + A+    +  +  +    L  +   L + ++   +S   
Sbjct: 72  LIPILGLGVPP--------TVTALTLYGLLPIVRNSIVGLRGVDPALVDAAKGIGMSRPA 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   I     
Sbjct: 124 RLLRVELPLAWPPILTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGIASLGS 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L  +L     I +   L 
Sbjct: 177 KNALNQVLAGTLGIIVLALLF 197



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+++ + +G+         +        +   P+     L++  +        
Sbjct: 25  VFQCMVVATLLGVLIGVLTYRSDWAGNVATLSTSAILTIPSLAMIGLLIPILGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             L+L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 85  TALTLYGLL----PIVRNSIVGLRGVDPALVDAAKGIGMSRPARLLRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +      +   IA    K +  +V+ G L +    L  
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSKNALNQVLAGTLGIIVLALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|323144832|ref|ZP_08079401.1| D-methionine transport system permease protein MetI [Succinatimonas
           hippei YIT 12066]
 gi|322415357|gb|EFY06122.1| D-methionine transport system permease protein MetI [Succinatimonas
           hippei YIT 12066]
          Length = 213

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA--------AKSRRLGMVLVPILDIMQSI 110
             L      T   +L A VI+ +F      L          +S     +L  I++ ++SI
Sbjct: 3   GLLFDGTLETFYMVLLASVITAIFGVPLGVLLLVTSRGYFWESPNFYRILGTIVNALRSI 62

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG   AAI  +  S +      +  SL  +P  L E + 
Sbjct: 63  P-FIILMVAIIPFTKMLVGTSIGTT-AAIVPLTVSTIPFTGRLIETSLRTVPYGLIEAAT 120

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           S   + WQ    + +P +MP ++ N  +++
Sbjct: 121 SMGATPWQIIRRVLLPEAMPEIIQNFTITV 150



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 58/199 (29%), Gaps = 16/199 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           +      T + V++  +I +I  +P+G+ +           P+    +      L + P 
Sbjct: 5   LFDGTLETFYMVLLASVITAIFGVPLGVLLLVTSRGYFWESPNFYRILGTIVNALRSIPF 64

Query: 431 NVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            +      P     V          + L +        L          P    E A+S 
Sbjct: 65  IILMVAIIPFTKMLVGTSIGTTAAIVPLTVSTIPFTGRLIETS--LRTVPYGLIEAATSM 122

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+  R ++LP   P  +            +S ++     G +       G      
Sbjct: 123 GATPWQIIRRVLLPEAMPEIIQNFTITVIVIIGSSAMAGTIGGGGLGDLAIRYGY--MRF 180

Query: 547 TEKGSFPEVVLGVLIMCCF 565
                   V++ +L++   
Sbjct: 181 RADMMIATVLILILMVQLV 199


>gi|310657342|ref|YP_003935063.1| glycine betaine transport system permease / glycine betaine-binding
           protein (fragment) [Clostridium sticklandii DSM 519]
 gi|308824120|emb|CBH20158.1| Glycine betaine transport system permease protein / Glycine
           betaine-binding protein (fragment) [Clostridium
           sticklandii]
          Length = 218

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 65/194 (33%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +       A++I  +          +++ L   ++  ++I+ +IP +    F V     
Sbjct: 26  IQHMYLTFLAILIITVIGIAVGIYMTRNKVLAGFIMGTVNIIYTIPSIALFGFLVALTGV 85

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                      +A+ A+    +  +  + Y  +  +   L + +     +  Q    + +
Sbjct: 86  GN--------KSALIALCIYGLLPVIRNTYVGINEVDPFLIQAATGMGSTDRQLLLKVQI 137

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++P +              VV +  +    + I   G+G  I   I            
Sbjct: 138 PLALPVIFAGFRT-------MVVMTIALGAIASFIGAGGLGVAIWRGITTNFPEMTFAGS 190

Query: 246 LTMLGVIFLYDQLL 259
           L + G+ F+ D +L
Sbjct: 191 LLVAGLAFVVDFIL 204



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           M+   + I+I ++I I VGI++     ++  I     ++   P+   F  +V+     + 
Sbjct: 29  MYLTFLAILIITVIGIAVGIYMTRNKVLAGFIMGTVNIIYTIPSIALFGFLVALTGVGNK 88

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +  + L +  +      ++ N   G +       + A+    T  +    + +P   P  
Sbjct: 89  SALIALCIYGLL----PVIRNTYVGINEVDPFLIQAATGMGSTDRQLLLKVQIPLALPVI 144

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
             G  T         +++         +   GLG  I              G L++    
Sbjct: 145 FAGFRT-------MVVMTIALGAIASFIGAGGLGVAIWRGITTNFPEMTFAGSLLVAGLA 197

Query: 567 LALNRFL 573
             ++  L
Sbjct: 198 FVVDFIL 204


>gi|260438044|ref|ZP_05791860.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Butyrivibrio crossotus DSM 2876]
 gi|292809523|gb|EFF68728.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system,
           permease component [Butyrivibrio crossotus DSM 2876]
          Length = 263

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 10/167 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            ++I     T++  ++  I   I  I   + +    +I    +PF  LL + P +   P+
Sbjct: 67  GFLIRHVWKTIYETLICFIFVMITAIAAAVLMWLNRNIFKVAEPFLVLLNSLPKSALAPV 126

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +        +    + +FG    I  +     +    +  ++  +          Y
Sbjct: 127 LIVWLGNSTKTVIIAAVSVAVFGAMLSIYTSF----TETDKEKIKLIRTLGGKKRHVLFY 182

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           ++ P   P  V       G +    I+ E  +         GLG  I
Sbjct: 183 LLFPSSLPTIVNAMKVNLGLSLVGVIIGEFLA------AKEGLGYLI 223



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 14/179 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++  +T    L   +  ++     A L   +R +  V  P L ++ S+P        +
Sbjct: 69  LIRHVWKTIYETLICFIFVMITAIAAAVLMWLNRNIFKVAEPFLVLLNSLPKSALAPVLI 128

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+  N     +I A   A+F            S+Y S     ++  ++ R+         
Sbjct: 129 VWLGNSTKTVIIAAVSVAVFGAM--------LSIYTSFTETDKEKIKLIRTLGGKKRHVL 180

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +YL  P S+P +V  M +++      V+  E +   +      G+G  I    +   + 
Sbjct: 181 FYLLFPSSLPTIVNAMKVNLGLSLVGVIIGEFLAAKE------GLGYLIIYGSQVFKMD 233


>gi|120601814|ref|YP_966214.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio vulgaris DP4]
 gi|120562043|gb|ABM27787.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Desulfovibrio vulgaris DP4]
 gi|311234575|gb|ADP87429.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio vulgaris RCH1]
          Length = 297

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 83/216 (38%), Gaps = 28/216 (12%)

Query: 73  LSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--Y 122
           L    +S L       + A         R+   + P+++++Q++P  ++GF    +V  +
Sbjct: 75  LVVTALSSLIAIPLGIMTAIYLAELAGPRMRAYVKPLVEMLQALPSVVIGFFGMVIVAPW 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +          A   +    V  +T     ++ ++P D+ E S +   + WQ    
Sbjct: 135 LQETFDIATGLNIANASIMLAFMAVPTITSIAEDAIYSVPNDMREASLALGATHWQTIGR 194

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG------------IGSYIA 230
           + VP ++PG+   +++ M+      +   M+  G  +  LPG            I + +A
Sbjct: 195 VVVPAALPGISTAVILGMARSIGETMVVLMVAGGAAM--LPGSIFDPSRPMPASIAAEMA 252

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
            A    D    L+A     G++  +  L F  +  W
Sbjct: 253 EAPFRSDHYHALFA----TGLVLFFFTLAFNALAAW 284



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 16/204 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F  + G  I        +I     Y       +     +   +V+  ++S+I IP+GI  
Sbjct: 33  FLFMEGFPIFQHVSLADFIFGKLWYPTFDPPEFGILPMIVGSLVVTALSSLIAIPLGIMT 92

Query: 409 GFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---------S 453
                    P + + ++P  ++L A P+ V        +    L     +         S
Sbjct: 93  AIYLAELAGPRMRAYVKPLVEMLQALPSVV-IGFFGMVIVAPWLQETFDIATGLNIANAS 151

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +++ F     I         + PND +E + +   T W+    +++P   P   T  I  
Sbjct: 152 IMLAFMAVPTITSIAEDAIYSVPNDMREASLALGATHWQTIGRVVVPAALPGISTAVILG 211

Query: 514 CGGAWNASIVSEVASWGHIHLRTT 537
              +   ++V  + + G   L  +
Sbjct: 212 MARSIGETMVVLMVAGGAAMLPGS 235


>gi|84495390|ref|ZP_00994509.1| ABC transporter-associated permease [Janibacter sp. HTCC2649]
 gi|84384883|gb|EAQ00763.1| ABC transporter-associated permease [Janibacter sp. HTCC2649]
          Length = 264

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 11/215 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
               ++ +  T+     +       ++  ++ ++IA++I IP+G+W+G     +  +   
Sbjct: 4   SIFEWLTSSATWSGDTGLGARLIQHLWYSLLAVVIAAVIAIPLGLWVG-HTGRAKWLVTL 62

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF---NVIAGASAFPND 478
           A  L A P       V   +     +   +L   ++      I      V AG  A    
Sbjct: 63  ANSLRAVPTLGLLFAVALWLGPKFQSDLAFLIPSIVVLVVLVIPPILSGVYAGVEAVDPA 122

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
            ++ A    + G    R + +P   P  ++G  +A       + V+     G       G
Sbjct: 123 TRDAARGMGMRGLEVVRQVEIPNALPLILSGLRSAFLQVIATATVAAYVGLG-------G 175

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           LG Y+ +  + G +     G L++    L ++  L
Sbjct: 176 LGRYLVDGIKTGDYVSTAGGALVVSLLALIVDGIL 210



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 79/214 (36%), Gaps = 9/214 (4%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
            + +           L     +     L A+VI+ +           + R    LV + +
Sbjct: 6   FEWLTSSATWSGDTGLGARLIQHLWYSLLAVVIAAVIAIPLGLWVGHTGRA-KWLVTLAN 64

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++++P LG L    ++    +   +    + +I  +    +  +   +Y  +  +    
Sbjct: 65  SLRAVPTLGLLFAVALWLGPKFQSDLAFL-IPSIVVLVVLVIPPILSGVYAGVEAVDPAT 123

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +R   + G +    + +P ++P ++  +       +  V+A+  +      + L G+
Sbjct: 124 RDAARGMGMRGLEVVRQVEIPNALPLILSGLR----SAFLQVIATATVAA---YVGLGGL 176

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G Y+   IK  D ++     L +  +  + D +L
Sbjct: 177 GRYLVDGIKTGDYVSTAGGALVVSLLALIVDGIL 210


>gi|302523297|ref|ZP_07275639.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|318062282|ref|ZP_07981003.1| ABC transporter permease [Streptomyces sp. SA3_actG]
 gi|318076799|ref|ZP_07984131.1| ABC transporter permease [Streptomyces sp. SA3_actF]
 gi|302432192|gb|EFL04008.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 226

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           + +    +T   H L    ++      +A+ I+L+     A LA + R     ++ +  +
Sbjct: 16  EWICGTYLTTRRHVLLDAVAQHIELTAAAVGIALVIAVPLAVLARRLRWAAGPVLALTTV 75

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + +IP L   +  +  +       V G  L          +  +  ++   L  +P +  
Sbjct: 76  LYTIPSLAMFSLLLPVYGLSATLVVAGLVL--------YSLTLLVRNLLAGLRAVPEETR 127

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + +R       +    + +P ++P     + ++M      V A  ++ VG  ++   G+G
Sbjct: 128 QAARGMGYGPLRLLLAVELPLALPAAFAGLRIAM------VSAVSLVTVG-AIVGFGGLG 180

Query: 227 SYIALAIKEQDLLAILYAML 246
           + I   +       +L A +
Sbjct: 181 NLIYQGMNTYFKAQVLTASV 200



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 11/155 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + IA +I +P+ +        +  +     +L   P+   F L++            
Sbjct: 42  AAAVGIALVIAVPLAVLARRLRWAAGPVLALTTVLYTIPSLAMFSLLLPVYGLSAT---- 97

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +   ++  +   ++ N++AG  A P + ++ A        R    + LP   P    G 
Sbjct: 98  LVVAGLVLYSLTLLVRNLLAGLRAVPEETRQAARGMGYGPLRLLLAVELPLALPAAFAGL 157

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             A   A +   V  +  +G       GLG  I +
Sbjct: 158 RIAMVSAVSLVTVGAIVGFG-------GLGNLIYQ 185


>gi|238061447|ref|ZP_04606156.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
 gi|237883258|gb|EEP72086.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
          Length = 228

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++I+ L     A  A   R L   ++    ++ +IP L         F  L P   IGA
Sbjct: 42  AVLIAALVALPLAVAAHWFRPLAGPILAFTGVLYTIPSLAL-------FALLAPYLGIGA 94

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
                  +  + +  +  +    L  +P D+ E +       W +   + +P ++PG++ 
Sbjct: 95  VTVLSVVVLYALLV-IVRNAVAGLSQVPPDVREAAEGMGYGRWGRLLRIELPLALPGILT 153

Query: 195 NMMMS 199
            + ++
Sbjct: 154 GLRLA 158



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA+++ +P+ +   +   ++  I  F  +L   P+   F L+   +    +     +
Sbjct: 42  AVLIAALVALPLAVAAHWFRPLAGPILAFTGVLYTIPSLALFALLAPYLGIGAVT----V 97

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             +++      I+ N +AG S  P D +E A       W     I LP   P  +TG   
Sbjct: 98  LSVVVLYALLVIVRNAVAGLSQVPPDVREAAEGMGYGRWGRLLRIELPLALPGILTGLRL 157

Query: 513 A 513
           A
Sbjct: 158 A 158


>gi|332296833|ref|YP_004438755.1| phosphate ABC transporter, inner membrane subunit PstC [Treponema
           brennaborense DSM 12168]
 gi|332179936|gb|AEE15624.1| phosphate ABC transporter, inner membrane subunit PstC [Treponema
           brennaborense DSM 12168]
          Length = 300

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 7/196 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L +L A+ + +      + +A   RR G  L   ++++  IP + +  F + + +   
Sbjct: 84  TFLALLIAVPVGVSAGIFLSEMAG--RRAGAFLRNAVELLAGIPSVIYGLFGISFIVPFV 141

Query: 128 PGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                G+    L+A   +    +  +      S+ N+P DL E S +   + WQ    + 
Sbjct: 142 RNTFGGSGYSVLSAALILAIMTLPTIINMTEVSVRNVPNDLREGSYALGATKWQTIIGVL 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +  G+V  +++ M       +A  ++V G+  I   G+ S +   +    +  + YA
Sbjct: 202 LPAARSGIVTGVVLGMGRAMGETMAV-LLVGGNAPIMPDGLSSMV-RTLTMNIITDMAYA 259

Query: 245 MLTMLGVIFLYDQLLF 260
             T L  +F    +LF
Sbjct: 260 EGTHLTSLFTTAIVLF 275



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 96/282 (34%), Gaps = 27/282 (9%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R          E    +C+   +S ++ +  F    G+ +  +     ++ +       
Sbjct: 6   ARKRRRAGEWCLEKTFLVCALISISSVILMSVFIFRQGLPLFASVSPADFLFSTDWAPTR 65

Query: 377 LYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFP 429
                 G ++     + +  +A +I +PVG+  G            + ++   +LLA  P
Sbjct: 66  DPDPGFGILSFVAGSLYVTFLALLIAVPVGVSAGIFLSEMAGRRAGAFLRNAVELLAGIP 125

Query: 430 ANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + ++         P V +       +      +L I  T   I+          PND +E
Sbjct: 126 SVIYGLFGISFIVPFVRNTFGGSGYSVLSAALILAIM-TLPTIINMTEVSVRNVPNDLRE 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            + +   T W+    ++LP      VTG +   G A   ++   +   G+  +   GL +
Sbjct: 185 GSYALGATKWQTIIGVLLPAARSGIVTGVVLGMGRAMGETMAV-LLVGGNAPIMPDGLSS 243

Query: 542 YIAESTEKG----------SFPEVVLGVLIMCCFVLALNRFL 573
            +   T                 +    +++  F+LALN  +
Sbjct: 244 MVRTLTMNIITDMAYAEGTHLTSLFTTAIVLFVFILALNLII 285


>gi|319938405|ref|ZP_08012800.1| ABC phosphate transporter [Coprobacillus sp. 29_1]
 gi|319806493|gb|EFW03157.1| ABC phosphate transporter [Coprobacillus sp. 29_1]
          Length = 287

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 77/183 (42%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L++ VL++ II  + +          +++   I      +      T   ++  ++I+  
Sbjct: 26  LISIVLLVVIIGYICYRGIPHFSFDYLINTTSILKKTVGILPNIINTLYMIVVTLLIAGP 85

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   A      A +++L  ++    +++  IP + +  F +++F  +    +  + L  
Sbjct: 86  ISIGGAIYLNEYATNKKLVHIISFTTEVLAGIPSIIYGLFGMLFFGGVL--NLSYSILTG 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +    +  ++ +   +L  +P+   E +     + W     + +P ++PG++  +++
Sbjct: 144 AFTLAIMILPIVSRNTQIALQAVPKSYREAALGIGATKWYMIRTVLLPSAIPGILTGIIL 203

Query: 199 SMS 201
           +M 
Sbjct: 204 AMG 206



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 8/183 (4%)

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGY---IVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           S ++ I    V+ G           +   I      +  + ++     T++ +VV ++IA
Sbjct: 24  STLISIVLLVVIIGYICYRGIPHFSFDYLINTTSILKKTVGILPNIINTLYMIVVTLLIA 83

Query: 398 SIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLS 453
             I I   I++        +   I    ++LA  P+ ++    +       +L+ ++   
Sbjct: 84  GPISIGGAIYLNEYATNKKLVHIISFTTEVLAGIPSIIYGLFGMLFFGGVLNLSYSILTG 143

Query: 454 LLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +      I+  N      A P  ++E A     T W   R ++LP   P  +TG I 
Sbjct: 144 AFTLAIMILPIVSRNTQIALQAVPKSYREAALGIGATKWYMIRTVLLPSAIPGILTGIIL 203

Query: 513 ACG 515
           A G
Sbjct: 204 AMG 206


>gi|255525671|ref|ZP_05392604.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           carboxidivorans P7]
 gi|296185429|ref|ZP_06853839.1| phosphate ABC transporter, permease protein PstC [Clostridium
           carboxidivorans P7]
 gi|255510657|gb|EET86964.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           carboxidivorans P7]
 gi|296050263|gb|EFG89687.1| phosphate ABC transporter, permease protein PstC [Clostridium
           carboxidivorans P7]
          Length = 301

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 69/159 (43%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +TL  + A+++S   +   A        R    ++ P L++   IP +  G++ F+V+  
Sbjct: 84  STLVSIGAVILSAPISIALAIFMNFISPRMGKKLVQPALELFVGIPSVVYGWIGFSVLLP 143

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G +  + +A I  +    +  +      ++  +P+   E S     + WQ    
Sbjct: 144 LIKKGFGGIGFSLIAGIIVLSIMILPTIASLSADAVRVVPKSYLEASYGLGATRWQTISK 203

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + +P +  G++ ++++ ++  +   +A +M++      P
Sbjct: 204 VILPAAKSGILTSIVLGLARAFGEALAVQMVIGNSIKFP 242



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 62/173 (35%), Gaps = 11/173 (6%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFPAN 431
              +++++    +++  V++   I+  + I +       P +    +QP  +L    P+ 
Sbjct: 75  LGALIFIVGSTLVSIGAVILSAPISIALAIFMNFI---SPRMGKKLVQPALELFVGIPSV 131

Query: 432 VFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVAS 484
           V+  +  S +       +  +  +L   ++++       + ++        P  + E + 
Sbjct: 132 VYGWIGFSVLLPLIKKGFGGIGFSLIAGIIVLSIMILPTIASLSADAVRVVPKSYLEASY 191

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
               T W+    +ILP      +T  +     A+  ++  ++     I     
Sbjct: 192 GLGATRWQTISKVILPAAKSGILTSIVLGLARAFGEALAVQMVIGNSIKFPKN 244


>gi|239831072|ref|ZP_04679401.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239823339|gb|EEQ94907.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 401

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 9/180 (5%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVI 132
           +       +  +  +L   ++  L+I+Q+IP     G L   + +    +P     G   
Sbjct: 209 VVGIPLGLVCHRVPKLRAFVLNSLNIVQTIPSMALFGILIAPLSWVATQFPWVGALGIRG 268

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P +
Sbjct: 269 IGAAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFKTEFPLAFPVI 328

Query: 193 VWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +  + + M        +A+ +   G       GIG      +    L  +L A    + +
Sbjct: 329 LTGIRIVMVQNIGLTTIAALIGGGGFGTFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 388



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL--- 454
           +++ IP+G+     P + + +     ++   P+   F ++++ +S+         +L   
Sbjct: 208 TVVGIPLGLVCHRVPKLRAFVLNSLNIVQTIPSMALFGILIAPLSWVATQFPWVGALGIR 267

Query: 455 ---------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                     +   +   I+ N +AG +  P    + A    +T  +       P  FP 
Sbjct: 268 GIGAAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFKTEFPLAFPV 327

Query: 506 YVTGAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            +TG            +I + +   G       G+G    +    G+ P V+L       
Sbjct: 328 ILTGIRIVMVQNIGLTTIAALIGGGGFGTFVFQGIGQTAMDLVLLGALPTVLLAFAAAVI 387

Query: 565 F 565
            
Sbjct: 388 L 388


>gi|332982527|ref|YP_004463968.1| phosphate ABC transporter membrane protein 2 [Mahella australiensis
           50-1 BON]
 gi|332700205|gb|AEE97146.1| phosphate ABC transporter membrane protein 2, PhoT family [Mahella
           australiensis 50-1 BON]
          Length = 295

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 73/177 (41%), Gaps = 13/177 (7%)

Query: 73  LSAMVISLLFTFVYA-----TLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++IS++FT          LA  A+  +L   +   ++ + S+P +    F ++ F+N
Sbjct: 66  FMMLIISMIFTIPLGLGGGIYLAEYARPGKLTDAIRLCVETLASLPSIVVGLFGLLVFVN 125

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                      A    +    V  MT     ++  +  +L+E S +   + WQ    + +
Sbjct: 126 FTGWGYTLLGGALSLTVLNLPV--MTRVCEDAIRTVKDELKEASLALGATKWQTITKVIL 183

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           P ++PG++  ++++ SG  F   A+ M   G +    P I   +      +  L I+
Sbjct: 184 PIALPGILTGIILT-SGRVFGEAAAIMYTAGMSS---PNINFEVWDFTNPRSPLNIM 236



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 23/172 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++II+ I  IP+G+  G           ++  I+   + LA+ P+     +VV     
Sbjct: 66  FMMLIISMIFTIPLGLGGGIYLAEYARPGKLTDAIRLCVETLASLPS-----IVVGLFGL 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRY 496
                       ++ G     + N+               ++ KE + +   T W+    
Sbjct: 121 LVFVNFTGWGYTLLGGALSLTVLNLPVMTRVCEDAIRTVKDELKEASLALGATKWQTITK 180

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +ILP   P  +TG I   G  +  +      +     + +  +   + + T 
Sbjct: 181 VILPIALPGILTGIILTSGRVFGEAAAIMYTAG----MSSPNINFEVWDFTN 228


>gi|326403229|ref|YP_004283310.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325050090|dbj|BAJ80428.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 254

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 6/159 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
                + IQP+A +L   P     PL++  V        +  +++      + +L N  A
Sbjct: 83  SRLARAAIQPWAVVLQVTPVVAIAPLIIIWVHQQFAAMVVCATIV----AFFPVLSNTAA 138

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G +A P +  ++      + W+    + LP   P+++ G   A   A   ++V+E  +  
Sbjct: 139 GLAATPPELADLFRLNGASRWQTLALLRLPSALPFFLAGLRIAGTLALVGAVVAEFVASS 198

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  GL   I ES  +   P +   ++++    + +
Sbjct: 199 GGF--AGGLAGRILESGYRLEIPRMFAALMLLAVTGIGI 235



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           SR     + P   ++Q  P++      +++    +   V+ A + A F + +        
Sbjct: 83  SRLARAAIQPWAVVLQVTPVVAIAPLIIIWVHQQFAAMVVCATIVAFFPVLS-------- 134

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           +    L   P +L ++ R    S WQ    L +P ++P  +  + ++ +      V +E 
Sbjct: 135 NTAAGLAATPPELADLFRLNGASRWQTLALLRLPSALPFFLAGLRIAGTLALVGAVVAEF 194

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             V  +     G+   I  +    ++  +  A++ +     
Sbjct: 195 --VASSGGFAGGLAGRILESGYRLEIPRMFAALMLLAVTGI 233


>gi|158423566|ref|YP_001524858.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           [Azorhizobium caulinodans ORS 571]
 gi|158330455|dbj|BAF87940.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease
           [Azorhizobium caulinodans ORS 571]
          Length = 292

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 89/285 (31%), Gaps = 26/285 (9%)

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
           S     +     +K     +  +R       L        +  +D F+F    G+A  I 
Sbjct: 18  SEAEIEAKARARIKARRTLVITLRIAILVAVLGFWEIGAETGFIDPFFFASPSGIADQIW 77

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
                       +  ++       +T+   V+  II ++  +  GI +G    ++     
Sbjct: 78  IWITEGTSQGPLWTQIV-------VTLEETVLGFIIGAVGGVVCGILLGRNKLLADVFSI 130

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           + ++  + P  V   + +  +     +      +++ F        N   G         
Sbjct: 131 YIKIANSIPRVVLGSIFIIALGLGMPSKVALAVVMVFFVVF----ANAFQGVREADRAMI 186

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A     + ++    +I+P    + +     + G A   ++V E            G+G
Sbjct: 187 ANAQILGASPFKITTTVIIPSAMSWILASLHVSFGFALVGAVVGEFLG------AKQGVG 240

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL--------NRFL-WHP 576
             IA +    +   V   ++I+    L +        NR + W P
Sbjct: 241 LLIATAQGAFNANGVFAAMIILAVLALVMEFLITLVENRLVKWRP 285



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 80/215 (37%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                 L      T    +   +I  +   V   L  +++ L  V    + I  SIP + 
Sbjct: 83  GTSQGPLWTQIVVTLEETVLGFIIGAVGGVVCGILLGRNKLLADVFSIYIKIANSIPRVV 142

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  ++      P KV  A +   F +F         + +Q +    R +   ++    
Sbjct: 143 LGSIFIIALGLGMPSKVALAVVMVFFVVFA--------NAFQGVREADRAMIANAQILGA 194

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S ++    + +P +M  ++ ++ +S     F +V +   VVG+ +    G+G  IA A  
Sbjct: 195 SPFKITTTVIIPSAMSWILASLHVSFG---FALVGA---VVGEFLGAKQGVGLLIATAQG 248

Query: 235 EQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +   +  AM+ +  +  +      L+   ++ W
Sbjct: 249 AFNANGVFAAMIILAVLALVMEFLITLVENRLVKW 283


>gi|167037243|ref|YP_001664821.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040617|ref|YP_001663602.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X514]
 gi|256751998|ref|ZP_05492867.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914658|ref|ZP_07131974.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X561]
 gi|307724108|ref|YP_003903859.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter sp. X513]
 gi|320115662|ref|YP_004185821.1| phosphate ABC transporter inner membrane subunit PstC
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854857|gb|ABY93266.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X514]
 gi|166856077|gb|ABY94485.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749108|gb|EEU62143.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889593|gb|EFK84739.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X561]
 gi|307581169|gb|ADN54568.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter sp. X513]
 gi|319928753|gb|ADV79438.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 299

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 77/165 (46%), Gaps = 5/165 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   +    + A++IS       A        +    +L P ++I   IP +  G++ 
Sbjct: 76  LQFILGSIYVSVFAIMISAPIGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVG 135

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 136 LTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIKSLPTEIREASYALGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           WQ   ++ +P + PG++  +++ ++  +   +A +M++    VIP
Sbjct: 196 WQTIRHVILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIP 240



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 67/161 (41%), Gaps = 9/161 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           +++  V  I+I++ I +   I++    +      +QP  ++    P+ V+  + ++ +  
Sbjct: 82  SIYVSVFAIMISAPIGVSSAIFMVEIAKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVP 141

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                +  L  +L   +L++       + +V      + P + +E + +   T W+  R+
Sbjct: 142 FISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIKSLPTEIREASYALGATRWQTIRH 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP   P  +T  +     A+  ++  ++       +  +
Sbjct: 202 VILPAAKPGILTAIVLGLARAFGEALAVQMVIGNRPVIPKS 242


>gi|114565898|ref|YP_753052.1| sulfonate transport system permease [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336833|gb|ABI67681.1| putative sulfonate transport system permease protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 248

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 10/194 (5%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +  G  T ++V++ + +  ++ +P+G+ IG    +    +P   ++ A P   +  LV+ 
Sbjct: 51  LLAGLQTAWKVLMALGLVLLLGLPLGLIIGLFEPLYDMSRPIIMVIQAVPVISWLSLVLF 110

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                   P L   L ++       +   ++G         E+A  + +   +    I  
Sbjct: 111 TWGRNWQGPVLIAFLSILPIA----ILTTVSGVRNLDKKLLEMARLYQVPARKIIHDIYF 166

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
             + P+ +     + G AW   +V+E           +GLG  I ++      P V    
Sbjct: 167 GSLLPFIIAIIDVSLGQAWKVILVAEYLCGD------SGLGLKIFDARSFVDTPSVYAYT 220

Query: 560 LIMCCFVLALNRFL 573
           L+     +   R +
Sbjct: 221 LLAVLLGIITERLI 234



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 101/242 (41%), Gaps = 14/242 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++  ++ F+L+  ++ ++L        P +   +    L   +      +T  ++L A+ 
Sbjct: 7   SLVGIIVFILLWQLLAVILDKSIIVPTPGETFGLFFHLLLSPATLLAGLQTAWKVLMALG 66

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           + LL       +      L  +  PI+ ++Q++P++ +L+  +  +   + G V+ A L+
Sbjct: 67  LVLLLGLPLGLIIGLFEPLYDMSRPIIMVIQAVPVISWLSLVLFTWGRNWQGPVLIAFLS 126

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +     + V          + N+ + L E++R +++   +    +     +P ++  + 
Sbjct: 127 ILPIAILTTV--------SGVRNLDKKLLEMARLYQVPARKIIHDIYFGSLLPFIIAIID 178

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +S+   W  ++ +E +          G+G  I  A    D  ++    L  + +  + ++
Sbjct: 179 VSLGQAWKVILVAEYLCGDS------GLGLKIFDARSFVDTPSVYAYTLLAVLLGIITER 232

Query: 258 LL 259
           L+
Sbjct: 233 LI 234


>gi|167037745|ref|YP_001665323.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040407|ref|YP_001663392.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|256752255|ref|ZP_05493118.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914491|ref|ZP_07131807.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307724273|ref|YP_003904024.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
 gi|320116160|ref|YP_004186319.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166854647|gb|ABY93056.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X514]
 gi|166856579|gb|ABY94987.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748823|gb|EEU61864.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889426|gb|EFK84572.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X561]
 gi|307581334|gb|ADN54733.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter sp. X513]
 gi|319929251|gb|ADV79936.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 217

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   +  +  I+ +F      L          ++  L  +L  I++
Sbjct: 1   MSETINLLLVATWQTIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F  L  GK IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRLLVGKAIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGI 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E ++S   S  Q    + VP ++P +   + ++
Sbjct: 119 IEAAQSMGASPLQIITKVLVPEALPSIAAGITIT 152



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V   IA+I  +P+GI         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVAVSTFIATIFGVPLGILLMVTDRNQILQNELLNKILGTIVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  ++  +   I F                 E A S   +  +  
Sbjct: 74  LIPFTRLLVGKAIGTTAAIVPLSVAAIPFMGRLTETALREVDRGIIEAAQSMGASPLQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TKVLVPEALPSIAAGITIT 152


>gi|326802093|ref|YP_004319912.1| phosphate ABC transporter inner membrane subunit PstC
           [Sphingobacterium sp. 21]
 gi|326552857|gb|ADZ81242.1| phosphate ABC transporter, inner membrane subunit PstC
           [Sphingobacterium sp. 21]
          Length = 296

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 12/207 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +++ +AF++ +  ++ +               I+P+      L      T   ML A+ I
Sbjct: 36  LWNTVAFLIEVKPLDFITGTQWNPGGTPATYGILPL------LVSTCLVTFGAMLIAIPI 89

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGA 134
            +      +  A  +RRL  +L P ++++ ++P   +GFL   ++      L        
Sbjct: 90  GIGTAAFLSEYA--NRRLRNILKPAIEMLAAVPSVAIGFLGIVILSPQLGELSNQPNGLN 147

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L     +    +  +      +L ++P+  +E S     + WQ    + +P S PG++ 
Sbjct: 148 ALNGAILLAIMALPTIITVTEDALHSLPQSYKEASFGLGANRWQTLCKITIPSSAPGILA 207

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +M+ +       +   M        P
Sbjct: 208 AVMLGVGRALGETMTVLMATGNAAAFP 234



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  IF+  +   VA  I  + + +I             +     +    ++   A +
Sbjct: 25  IAILGGIFFMLLWNTVAFLIEVKPLDFITGTQWNPGGTPATYGILPLLVSTCLVTFGAML 84

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNP--- 448
           I IP+GI             + + ++P  ++LAA P+    F  +V+       L+    
Sbjct: 85  IAIPIGIGTAAFLSEYANRRLRNILKPAIEMLAAVPSVAIGFLGIVILSPQLGELSNQPN 144

Query: 449 ---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  ++L+       I+        + P  +KE +       W+    I +P   P 
Sbjct: 145 GLNALNGAILLAIMALPTIITVTEDALHSLPQSYKEASFGLGANRWQTLCKITIPSSAPG 204

Query: 506 YVTGAITACGGAWNASIVSEVASW 529
            +   +   G A   ++   +A+ 
Sbjct: 205 ILAAVMLGVGRALGETMTVLMATG 228


>gi|116512572|ref|YP_811479.1| ABC-type phosphate transport system, permease component
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116108226|gb|ABJ73366.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 307

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP +A    + +LSA+V +  F             +    +L P+++++  IP + +
Sbjct: 82  VGALPMFAGSLIITVLSALV-ATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVY 140

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               LT  V    N++ G      L+ +F +F   +  +T     ++  +P   +E S  
Sbjct: 141 GFIGLTVVVPAIRNVF-GGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLG 199

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  W + +  + PG++  ++  M+  +   +A +M+V    ++P
Sbjct: 200 LGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMP 249



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 64/170 (37%), Gaps = 9/170 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISS-KIQPFAQLLAAFPANVF--- 433
            + +   ++   V+  ++A+   I  GI++    P      +QP  +LL   P+ V+   
Sbjct: 84  ALPMFAGSLIITVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFI 143

Query: 434 -FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHIT 489
              +VV  +   +      L   + ++F      +    +    A P+ +KE +     T
Sbjct: 144 GLTVVVPAIRNVFGGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGAT 203

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            W+    ++L    P  +T  I     A+  ++  ++     + +    +
Sbjct: 204 RWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMPKDLI 253


>gi|325291636|ref|YP_004277500.1| proline/glycine/betaine ABC transporter transmembrane protein
           [Agrobacterium sp. H13-3]
 gi|325059489|gb|ADY63180.1| proline/glycine/betaine ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 246

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 88/234 (37%), Gaps = 21/234 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+AF+    +   +   + +T  P        ++L +  L   A  T L  L A  +++L
Sbjct: 17  LMAFLAAPQVFAPIFRPLVQTNAPAIYTQANLLSLTLSHLTIVAIATGLATLVAGALAVL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            T  +            +   I++I Q+ P +  L   V          +   E   + A
Sbjct: 77  VTRPFGA------DFLPLSRSIVNIGQTFPPVAVLALAV--------PMIGFGEKPTLIA 122

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +F   +  +  +    L  +P  + + ++   ++GWQ+   + +P ++P ++  + +S  
Sbjct: 123 LFLYALLPVFENTLTGLTTLPPTVMDAAKGAGMTGWQRLVKVELPLALPAILAGIRLS-- 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                 V S       + +    +G  I   ++  +L  IL   L +  +  L 
Sbjct: 181 -----AVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAVLAILI 229



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 15/183 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           V +   +A+++   + + +  RP  +  +   +    +   FP      L V  + +   
Sbjct: 59  VAIATGLATLVAGALAVLV-TRPFGADFLPLSRSIVNIGQTFPPVAVLALAVPMIGFGEK 117

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      +  N + G +  P    + A    +TGW+    + LP   P  
Sbjct: 118 PTLIALFLYALL----PVFENTLTGLTTLPPTVMDAAKGAGMTGWQRLVKVELPLALPAI 173

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +        ++S   +     +    LG  I    +  +   ++ G LI+    
Sbjct: 174 LAGIRLSA-------VISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAVLA 226

Query: 567 LAL 569
           + +
Sbjct: 227 ILI 229


>gi|219851978|ref|YP_002466410.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
 gi|219546237|gb|ACL16687.1| binding-protein-dependent transport systems inner membrane
           component [Methanosphaerula palustris E1-9c]
          Length = 204

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 15/189 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L        L   SA+++S+L       L    R    V++P+ +++Q++P L  + 
Sbjct: 4   LSTLLAAIGDHILLAYSALLVSILLAVPLTLLMLYCRPAARVIMPVTNLVQAVPSLAVVA 63

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V      +          A+ AI    +  +  + +  L +I     + +    L+ W
Sbjct: 64  LIVPLIGIGF--------YPAVIAIVLRALLPLVKNTWVGLVSIDPAEIDAANGLGLTRW 115

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +   Y+  P ++P     +        F  + +  + V   +I   G+GS +   +   +
Sbjct: 116 EILRYIRAPHALPPFFAGVR-------FAAILANSLAVLTAIIGSGGLGSLVFEGLAGMN 168

Query: 238 LLAILYAML 246
            + +    +
Sbjct: 169 TVTLAAGAV 177



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++++ ++ +P+ + + +    +  I P   L+ A P+     L+V  +           
Sbjct: 21  ALLVSILLAVPLTLLMLYCRPAARVIMPVTNLVQAVPSLAVVALIVPLIGIGF----YPA 76

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            + ++      ++ N   G  +      + A+   +T W   RYI  P   P +  G   
Sbjct: 77  VIAIVLRALLPLVKNTWVGLVSIDPAEIDAANGLGLTRWEILRYIRAPHALPPFFAGVRF 136

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           A   A + ++++ +   G       GLG+ + E     +   +  G +
Sbjct: 137 AAILANSLAVLTAIIGSG-------GLGSLVFEGLAGMNTVTLAAGAV 177


>gi|125624682|ref|YP_001033165.1| phosphate transport system permease protein pstD [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493490|emb|CAL98468.1| phosphate transport system permease protein pstD [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071476|gb|ADJ60876.1| phosphate ABC transporter, permease protein PstC [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 307

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP +A    + +LSA+V +  F             +    +L P+++++  IP + +
Sbjct: 82  VGALPMFAGSLIVTVLSALV-ATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVY 140

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               LT  V    N++ G      L+ +F +F   +  +T     ++  +P   +E S  
Sbjct: 141 GFIGLTVVVPAIRNVF-GGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLG 199

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  W + +  + PG++  ++  M+  +   +A +M+V    ++P
Sbjct: 200 LGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMP 249



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSC 440
           +++ ++++++  P  I  G         +    +QP  +LL   P+ V+      +VV  
Sbjct: 92  LIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPA 151

Query: 441 V--SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   +      L   + ++F      +    +    A P+ +KE +     T W+    +
Sbjct: 152 IRNVFGGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRV 211

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +L    P  +T  I     A+  ++  ++     + +    +
Sbjct: 212 LLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMPKDLI 253


>gi|265997410|ref|ZP_06109967.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|262551878|gb|EEZ07868.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
          Length = 386

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 9/178 (5%)

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYP-----GKVIGA 134
                 +  +  RL   ++  L+I+Q+IP     G L   + +F   +P     G     
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 255

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++ 
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 195 NMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
            + + M        +A+ +   G  +    GIG      +    L  +L A    + +
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------ 454
            IP+G+     P + + +     ++   P+   F ++++ +S++        SL      
Sbjct: 196 GIPLGLICHRLPRLRASVLNSLNIVQTIPSMALFGILIAPLSWFAAQFPWAASLGIRGIG 255

Query: 455 ------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N +AG +  P    + A    +T  +       P  FP  +T
Sbjct: 256 AAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFRTEFPLAFPVILT 315

Query: 509 GAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           G            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 316 GIRIVMVQNIGLTTIAALIGGGGFGIFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 373


>gi|73662671|ref|YP_301452.1| phosphate ABC transporter permease [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495186|dbj|BAE18507.1| ABC-type phosphate transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 309

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 111/288 (38%), Gaps = 24/288 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYA 65
            S +I P I  ++A   ++  I I++  + ET      V      L +      S P+Y 
Sbjct: 22  TSDKIAPIILGIIAVFSILATIGIIVTLLTETITFFTRVSFADFFLTMDWNPFSSTPKYG 81

Query: 66  SRTT-LRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF--- 115
                L  L   VI+ +        AA       S R   ++ PIL+I+  IP + F   
Sbjct: 82  IWALILGTLKITVIATIVAVPIGLGAALYLSEYASSRARSIIKPILEILSGIPTIVFGFF 141

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            LTF      +++P       ++    +    +  ++     ++ ++P  + E +     
Sbjct: 142 ALTFVTPILRSVFPELGSFNSISPGIVVGVMIIPLISSMSEDAMSSVPNKMREGALGLGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPG-----IGS 227
           + ++    + +P +  G++ ++++++S   G   +V+          + L G      G 
Sbjct: 202 TKFEVATKVVLPAATSGIMASIVLAISRAIGETMIVSLAAGSTPSASLDLTGSIQTMTGY 261

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +A  +    + +Y  +  +G       L+   +  W + +FR E 
Sbjct: 262 IVQVATGDATFGSDIYYSIYAVGFTLFLFTLIMNLISHWITKRFREEY 309



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 92/277 (33%), Gaps = 30/277 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT---------MFRV 390
           +  ++ +F      G+ + +  ++I +          L + W    +         +   
Sbjct: 30  ILGIIAVFSILATIGIIVTLLTETITFFTRVSFADFFLTMDWNPFSSTPKYGIWALILGT 89

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPL 436
           + + +IA+I+ +P+G+               S I+P  ++L+  P  VF         P+
Sbjct: 90  LKITVIATIVAVPIGLGAALYLSEYASSRARSIIKPILEILSGIPTIVFGFFALTFVTPI 149

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           + S         ++   +++       I        S+ PN  +E A     T +     
Sbjct: 150 LRSVFPELGSFNSISPGIVVGVMIIPLISSMSEDAMSSVPNKMREGALGLGATKFEVATK 209

Query: 497 IILPGIFPYYVTGAITACGGAWN--ASIVSEVASWGHIHLRTTG-----LGAYIAESTEK 549
           ++LP      +   + A   A      +     S     L  TG      G  +  +T  
Sbjct: 210 VVLPAATSGIMASIVLAISRAIGETMIVSLAAGSTPSASLDLTGSIQTMTGYIVQVATGD 269

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +F   +   +    F L L   + + +  + T+  R
Sbjct: 270 ATFGSDIYYSIYAVGFTLFLFTLIMNLISHWITKRFR 306


>gi|154245478|ref|YP_001416436.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154159563|gb|ABS66779.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 295

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 87/283 (30%), Gaps = 26/283 (9%)

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
               +     +K     +  +R       L +      +  +D F+F    G+A  I   
Sbjct: 23  AEIEAKARARLKARRTLVISLRIAILVAVLGIWELGAQTGFIDPFFFASPSGIAEQIWVW 82

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
                     +  +L       +T+   V+   I +   I  GI +G    ++     + 
Sbjct: 83  MTEGTSQGSLWVQIL-------VTLEETVLGFFIGAAGGIVCGIVLGRNKLLADVFSIYI 135

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           ++  + P  V   + +  +     +      +++ F        N   G           
Sbjct: 136 KIANSIPRVVLGSIFIIALGLGMASKVALAVVMVFFVVF----ANAFQGVREADRAMIAN 191

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A     + ++    +I+P    + +     + G A   ++V E            G+G  
Sbjct: 192 AQILGASPFQITTSVIIPSAMSWILASLHVSFGFALVGAVVGEFLG------AKQGVGLL 245

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL--------NRFL-WHP 576
           IA +    +   V   ++I+    L +        NR + W P
Sbjct: 246 IATAQGAFNANGVFAAMIILAVLALVMEFLITLVENRLVKWRP 288



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
                SL      T    +    I      V   +  +++ L  V    + I  SIP + 
Sbjct: 86  GTSQGSLWVQILVTLEETVLGFFIGAAGGIVCGIVLGRNKLLADVFSIYIKIANSIPRVV 145

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             +  ++        KV  A +   F +F         + +Q +    R +   ++    
Sbjct: 146 LGSIFIIALGLGMASKVALAVVMVFFVVFA--------NAFQGVREADRAMIANAQILGA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S +Q    + +P +M  ++ ++ +S     F +V +   VVG+ +    G+G  IA A  
Sbjct: 198 SPFQITTSVIIPSAMSWILASLHVSFG---FALVGA---VVGEFLGAKQGVGLLIATAQG 251

Query: 235 EQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266
             +   +  AM+ +  +  +      L+   ++ W
Sbjct: 252 AFNANGVFAAMIILAVLALVMEFLITLVENRLVKW 286


>gi|251779619|ref|ZP_04822539.1| ABC transporter, permease protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083934|gb|EES49824.1| ABC transporter, permease protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 256

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R V+  I+A ++ I +G+     P     + P        P  V   LV+       
Sbjct: 62  SVYRSVLCYILAIVLAIVLGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWF---- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ F   + IL+  I G  +       ++ + + I+     + I  P I  
Sbjct: 118 --NKDNAPFIVGFAITFPILYEGIVGSLNNIDEKLIDMMNIYEISLIDKIKKIYGPVIKF 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              +  ++    A+   I  EV           G+G+ I       +   +   ++I+  
Sbjct: 176 QLASIFVSTFSLAFKVVIAGEV-----HGQPKYGIGSAIQLEKVNFNTSGIFAWIVIIVI 230

Query: 565 FVLAL---NRFLWHPLYLY 580
             LA    N      +Y +
Sbjct: 231 LSLAFEFINNLFKARIYRW 249



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F+ V  ++ ++++        + ++  +   +           +  R +   +++++
Sbjct: 16  CLFFLTVWQVLAVIINNDIYLPNIQQVITEMIKIISRKDFNLILISSVYRSVLCYILAIV 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              V   L         +L PI    ++IP +  +   +V+F       ++G        
Sbjct: 76  LAIVLGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWFNKDNAPFIVG-------- 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +   +  SL NI   L ++   + +S   K   +  P     L    + + S
Sbjct: 128 -FAITFPILYEGIVGSLNNIDEKLIDMMNIYEISLIDKIKKIYGPVIKFQLASIFVSTFS 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  V+A E+        P  GIGS I L     +   I   ++ ++ +   ++ +
Sbjct: 187 LAFKVVIAGEV-----HGQPKYGIGSAIQLEKVNFNTSGIFAWIVIIVILSLAFEFI 238


>gi|154686757|ref|YP_001421918.1| hypothetical protein RBAM_023270 [Bacillus amyloliquefaciens FZB42]
 gi|154352608|gb|ABS74687.1| PstA [Bacillus amyloliquefaciens FZB42]
          Length = 294

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +L    + IL+HG+ E ++         I      +      +   +   M+I++ 
Sbjct: 20  VIAAILAGLFLYILIHGVSEISLHFLTSKSSAIA-SGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAKSRRLGMV---LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+      +   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVFMAEYAPQNRITDFIRTCIEVLSSLPSIVIGMFGMLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      +L  +P++L+E S +  +S W     + VP ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEGALTAVPKELKEASLALGVSRWHTVKTVLVPSAIPSILTGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 21/189 (11%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPV 404
               ++ G+ + I    +  I  HF       +   G I   +F    ++ I  +I IP+
Sbjct: 20  VIAAILAGLFLYILIHGVSEISLHFLTSKSSAIASGGGIRDQLFNSFYILFITMLITIPL 79

Query: 405 GIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           G+  G        +  I+  I+   ++L++ P+     +V+                 +I
Sbjct: 80  GVGGGVFMAEYAPQNRITDFIRTCIEVLSSLPS-----IVIGMFGMLMFVNLTGWGYTII 134

Query: 458 FGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            G     +FN            +A P + KE + +  ++ W   + +++P   P  +TGA
Sbjct: 135 GGALALTVFNLPVMVRVTEGALTAVPKELKEASLALGVSRWHTVKTVLVPSAIPSILTGA 194

Query: 511 ITACGGAWN 519
           I A G  + 
Sbjct: 195 ILASGRVFG 203


>gi|150377219|ref|YP_001313814.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031766|gb|ABR63881.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 251

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTV 120
               +    +  A  +++L       + ++   R     ++ + +I  ++P L  L  ++
Sbjct: 52  YLVVQHLELVAWAGGLAILVAVPVGVVLSRPAFRLFSEAVMQVFNIGSTVPTLAILALSM 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                          + A+F ++ + +  +  + Y  L  +P  L E +    ++  Q  
Sbjct: 112 TLLGIG--------TVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAAIGMGMTPRQVL 163

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P ++  +   +  +++      V S  +V    +I   G+G  I   I   +L  
Sbjct: 164 WRVELPNALFVIFGGIRTALAI----CVGSAPLV---FLIGAGGLGELIFTGISLDELPM 216

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           ++   +    +  L D +L +
Sbjct: 217 MMAGAIPTAMLAVLVDFILGQ 237



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 14/250 (5%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           +  + S  ++     V+  +A  +AW      +          + +L    +  V     
Sbjct: 8   AAPQQSRRIETAPLIVLIVLAGTVAW-LWWSGMAEEILVYSDDISYLVVQHLELVAWAGG 66

Query: 396 IASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +A ++ +PVG+ +        S  +     + +  P      L ++ +        +   
Sbjct: 67  LAILVAVPVGVVLSRPAFRLFSEAVMQVFNIGSTVPTLAILALSMTLLGIG----TVPAV 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
             +   T   I+ N  AG  A P    E A    +T  +    + LP        G  TA
Sbjct: 123 FGLWAATLLPIVRNTYAGLRAVPPHLVEAAIGMGMTPRQVLWRVELPNALFVIFGGIRTA 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 ++ +  +   G       GLG  I         P ++ G +      + ++  L
Sbjct: 183 LAICVGSAPLVFLIGAG-------GLGELIFTGISLDELPMMMAGAIPTAMLAVLVDFIL 235

Query: 574 WHPLYLYGTR 583
               Y    R
Sbjct: 236 GQIQYYLVPR 245


>gi|110640184|ref|YP_680394.1| phosphate ABC transporter permease [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282865|gb|ABG61051.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 295

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           T L    AM +++      A   ++  S R+  ++ P+L+I+ SIP + +  F + +   
Sbjct: 72  TFLTTFIAMAVAVPLGITIAVYLSEYASSRVRQIVKPVLEILASIPTIVYGYFALAFVTP 131

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFS------MYQSLCNIPRDLEEVSRSFRLSGWQK 179
           L      G EL+   A+    +  +            +L  +PR L E S +   + +Q 
Sbjct: 132 LIQHLFPGLELSNFNALAPGIIMGIMILPLVSSLSEDALYAVPRTLREGSYAMGATKFQT 191

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGG 203
            + + +P ++ G+  ++++++S  
Sbjct: 192 AFKVIIPAALSGIAVSIILALSRA 215



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 16/165 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF------- 433
           +    +   IA  + +P+GI I           +   ++P  ++LA+ P  V+       
Sbjct: 69  LAGTFLTTFIAMAVAVPLGITIAVYLSEYASSRVRQIVKPVLEILASIPTIVYGYFALAF 128

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI--AGASAFPNDFKEVASSFHITG 490
             PL+        L+    L+  +I G     L + +      A P   +E + +   T 
Sbjct: 129 VTPLIQHLFPGLELSNFNALAPGIIMGIMILPLVSSLSEDALYAVPRTLREGSYAMGATK 188

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           ++    +I+P          I A   A   +++  +A+     L 
Sbjct: 189 FQTAFKVIIPAALSGIAVSIILALSRAVGETMIVAIAAGNKPTLT 233


>gi|315923838|ref|ZP_07920067.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622871|gb|EFV02823.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 194

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 19/196 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +R  L  L ++ ++ +      TL ++  RL  + V     ++ +P L  L   V     
Sbjct: 3   ARHVLISLLSLAVAAVIAVPLGTLCSRLPRLEKISVGFWGALRIVPSLAILFLLVPIMGT 62

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L A  A+    +  M  +   +   +P D+ E +    + G + FW + V
Sbjct: 63  GL--------LPAATALTLLAIPPMLINTVLAFQTLPADILEAACGMGMPGRRLFWQIKV 114

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILY 243
           P + P +      +         A+E+I        I   G+G  I   +       +  
Sbjct: 115 PLAFPTIFAGFRTA---------AAEVIASATLAAYIGAGGLGELIFTGLGLMREDLLWI 165

Query: 244 AMLTMLGVIFLYDQLL 259
             L++  +  L   LL
Sbjct: 166 GGLSVAALSLLTGALL 181



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 6/186 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ + +A++I +P+G      P +      F   L   P+     L+V  +    L    
Sbjct: 10  LLSLAVAAVIAVPLGTLCSRLPRLEKISVGFWGALRIVPSLAILFLLVPIMGTGLLPAAT 69

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+LL I      +L N +      P D  E A    + G R +  I +P  FP    G 
Sbjct: 70  ALTLLAIP----PMLINTVLAFQTLPADILEAACGMGMPGRRLFWQIKVPLAFPTIFAGF 125

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TA      +A++ + + + G   L  TGLG    +    G      L +L     +  +
Sbjct: 126 RTAAAEVIASATLAAYIGAGGLGELIFTGLGLMREDLLWIGGLSVAALSLLT-GALLTLI 184

Query: 570 NRFLWH 575
           +R +  
Sbjct: 185 DRRVRR 190


>gi|220903841|ref|YP_002479153.1| phosphate ABC transporter inner membrane subunit PstC
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868140|gb|ACL48475.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 296

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 14/211 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F  + G+ +   +  + ++     Y      ++     +   + +   +S++ +
Sbjct: 26  LAGIVIFLFMEGLPLFAHYPVMDFLFGRLWYPTEDPGLFGIFPLLAASLAVTFFSSLLAV 85

Query: 403 PVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNP 448
           P+G+           P +   I+PF +LLAA P+ V          P +   +       
Sbjct: 86  PLGVLTAVYLTEIAHPAVRRVIKPFVELLAALPSVVLGFLGMVVLAPFLQDYLGAATGLN 145

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L  S+++ F +   I         + P D +E + +   T W+    +++P       T
Sbjct: 146 LLNASVVLAFMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVVIPAALSGIGT 205

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             +     A   ++V  + + G   + T+ L
Sbjct: 206 AVMLGMSRAIGETMVVLMVAGGAGIIPTSLL 236



 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 20/202 (9%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-F 123
           L+    S L       L A          +  V+ P ++++ ++P  +LGFL   V+  F
Sbjct: 74  LAVTFFSSLLAVPLGVLTAVYLTEIAHPAVRRVIKPFVELLAALPSVVLGFLGMVVLAPF 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  Y G   G  L     +          S+   +L ++PRDL E S +   + WQ    
Sbjct: 134 LQDYLGAATGLNLLNASVVLAFMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVR 193

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSYIALA 232
           + +P ++ G+   +M+ MS      +   M+  G  +IP             I + +A A
Sbjct: 194 VVIPAALSGIGTAVMLGMSRAIGETMVVLMVAGGAGIIPTSLLDPVRPMPASIAAEMAEA 253

Query: 233 IKEQDLLAILYAMLTMLGVIFL 254
               D    L+A+  +L ++ L
Sbjct: 254 PFRSDHYHALFAIGIVLFLLTL 275


>gi|303239886|ref|ZP_07326409.1| phosphate ABC transporter, inner membrane subunit PstC [Acetivibrio
           cellulolyticus CD2]
 gi|302592596|gb|EFL62321.1| phosphate ABC transporter, inner membrane subunit PstC [Acetivibrio
           cellulolyticus CD2]
          Length = 318

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 69/161 (42%), Gaps = 5/161 (3%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             + +  L A +I +    + A L A+   +RL  ++ P +D++  IP + +  F ++  
Sbjct: 100 LSSLMVTLGATLIGVTIGLMTAVLLAEISPKRLSGIIRPAVDLLAGIPSVVYGFFGLIVL 159

Query: 124 MNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + L      G     LAAI  +    +  +      S+  +P++ +E S +   S  +  
Sbjct: 160 VPLIDRNFGGGGNSLLAAIIILGIMILPTIVSISETSIRAVPKEYKEGSLALGASHIETI 219

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + + +P +  G+   +++ M       +A  +++     IP
Sbjct: 220 FKVILPAAKSGIFAAIVLGMGRAIGETMAVILVIGNTPQIP 260



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 68/201 (33%), Gaps = 9/201 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +F F     +   +    I + +     +    +  +   ++   +   +I   I +   
Sbjct: 62  VFIFANGIPIFFKVGLTDIIFGMEWKPLEGKFGIFPMILSSLMVTLGATLIGVTIGLMTA 121

Query: 406 IWIG--FRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVS----YYHLNPNLWLSLLMI 457
           + +       +S  I+P   LLA  P+ V+  F L+V        +     +L  +++++
Sbjct: 122 VLLAEISPKRLSGIIRPAVDLLAGIPSVVYGFFGLIVLVPLIDRNFGGGGNSLLAAIIIL 181

Query: 458 FGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  + ++      A P ++KE + +   +       +ILP          +   G 
Sbjct: 182 GIMILPTIVSISETSIRAVPKEYKEGSLALGASHIETIFKVILPAAKSGIFAAIVLGMGR 241

Query: 517 AWNASIVSEVASWGHIHLRTT 537
           A   ++   +       +  +
Sbjct: 242 AIGETMAVILVIGNTPQIPNS 262


>gi|260892359|ref|YP_003238456.1| phosphate ABC transporter, inner membrane subunit PstA [Ammonifex
           degensii KC4]
 gi|260864500|gb|ACX51606.1| phosphate ABC transporter, inner membrane subunit PstA [Ammonifex
           degensii KC4]
          Length = 294

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 76  MVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + +SL+       LA       AK   L   +   ++ + S+P +    F ++ F+    
Sbjct: 69  LFLSLIIVVPLGVLAGIYLSEYAKENALTRSIRLSIETLASLPSIVVGLFGLLLFVTALG 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                + LA   A+    +  M     ++L  +P+DL E S S   + WQ  + + +P +
Sbjct: 129 LGY--SLLAGALALTIINLPLMVRITEEALRTVPQDLREASLSLGATKWQTIYKVVLPTA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +PGL+  ++++ SG      A+ +   G T   L
Sbjct: 187 LPGLLTGIILA-SGRILGEAAALIFTAGLTTPRL 219



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCV 441
             L+ ++ II +P+G+  G           ++  I+   + LA+ P+ V   F L++   
Sbjct: 66  FYLLFLSLIIVVPLGVLAGIYLSEYAKENALTRSIRLSIETLASLPSIVVGLFGLLLFVT 125

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +       L  +L +       ++          P D +E + S   T W+    ++LP 
Sbjct: 126 ALGLGYSLLAGALALTIINLPLMVRITEEALRTVPQDLREASLSLGATKWQTIYKVVLPT 185

Query: 502 IFPYYVTGAITACG 515
             P  +TG I A G
Sbjct: 186 ALPGLLTGIILASG 199


>gi|16264559|ref|NP_437351.1| putative choline uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140697|emb|CAC49211.1| putative choline uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
          Length = 399

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 8/181 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV   + +L  G+  T    D+  +             A R     L ++  + +    
Sbjct: 148 LLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRADLFWTEAGRHVTLALGSLAAATIVGLP 207

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--------NLYPGKVIGAELA 137
              L  +  RL   ++ +L+ +Q+IP +      +                G        
Sbjct: 208 LGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIAANVPGAAAIGIRGIGAAP 267

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A  A+F   +  +  +    L  +P    + +R   ++  Q+   +  P + P ++  + 
Sbjct: 268 AFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILTGIR 327

Query: 198 M 198
           +
Sbjct: 328 I 328



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 70/215 (32%), Gaps = 14/215 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
                   +        +   +L     +  ++      +  G+ +   W  +  +  + 
Sbjct: 118 PASGFWVLVFAFSLLLADALTRLNPGPGLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYA 177

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              D+ +      +T+   +  +  A+I+ +P+GI       + + +      +   P+ 
Sbjct: 178 NRADLFWTEAGRHVTLA--LGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSI 235

Query: 432 VFFPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDF 479
             F ++++ + +   N     ++             +   +   ++ N + G +  P+  
Sbjct: 236 ALFGILIAPLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAA 295

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            + A    +T  +    I  P  FP  +TG     
Sbjct: 296 NDAARGIGMTDRQRLVAIEFPLAFPVILTGIRIVL 330


>gi|327182890|gb|AEA31337.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           amylovorus GRL 1118]
          Length = 331

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  +++ L    +A   A       S++    L  + +++  IP + +    LT  V  
Sbjct: 116 FAVTLLAALIATPFAIAIALFMTEYSSKKGADFLQSVTELLVGIPSVVYGFLGLTIIVPA 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             NL+ G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  ++
Sbjct: 176 IRNLFGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGATHWQTIYH 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 66/185 (35%), Gaps = 13/185 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +               + +     + ++A++I  P  I I            + 
Sbjct: 88  VFHFLTSTDWDPGEGKNHVGAAVMIVTSFAVTLLAALIATPFAIAIALFMTEYSSKKGAD 147

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 148 FLQSVTELLVGIPSVVYGFLGLTIIVPAIRNLFGGTGFGILAATLVLFVMVLPTITSLTV 207

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P+ F++ + +   T W+   +++L    P  +T  I     A+  ++  ++   
Sbjct: 208 DSLKAVPSHFRKASMALGATHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIG 267

Query: 530 GHIHL 534
             + +
Sbjct: 268 NAVLM 272


>gi|307307594|ref|ZP_07587326.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|306901720|gb|EFN32321.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 399

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 8/181 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV   + +L  G+  T    D+  +             A R     L ++V + +    
Sbjct: 148 LLVFAGVLVLAGGMLVTGRWDDLSIMKEYANRSDLFWTEAGRHVTLALGSLVAATVVGLP 207

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--------NLYPGKVIGAELA 137
              L  +  RL   ++ +L+ +Q+IP +      +                G        
Sbjct: 208 LGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWVAANIPGAAAIGIRGIGAAP 267

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A  A+F   +  +  +    L  +P    + +R   ++  Q+   +  P + P ++  + 
Sbjct: 268 AFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILTGIR 327

Query: 198 M 198
           +
Sbjct: 328 I 328



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 71/215 (33%), Gaps = 14/215 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
                   +        +   +L     +  ++      +  G+ +   W  +  +  + 
Sbjct: 118 PASGFWVLVFAFSLLVADALTRLNPGPGLRLLVFAGVLVLAGGMLVTGRWDDLSIMKEYA 177

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              D+ +      +T+   +  ++ A+++ +P+GI       + + +      +   P+ 
Sbjct: 178 NRSDLFWTEAGRHVTLA--LGSLVAATVVGLPLGILCHRVERLRAGVLNVLNAIQTIPSI 235

Query: 432 VFFPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDF 479
             F ++++ + +   N     ++             +   +   ++ N + G +  P+  
Sbjct: 236 ALFGILIAPLGWVAANIPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAA 295

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            + A    +T  +    I  P  FP  +TG     
Sbjct: 296 NDAARGIGMTDRQRLVAIEFPLAFPVILTGIRIVL 330


>gi|269115221|ref|YP_003302984.1| Spermidine/putrescine ABC transporter permease PotB [Mycoplasma
           hominis]
 gi|268322846|emb|CAX37581.1| Spermidine/putrescine ABC transporter permeaseprotein potB
           [Mycoplasma hominis ATCC 23114]
          Length = 299

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 78/196 (39%), Gaps = 8/196 (4%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--YF 123
            R+    + A   +L+  F YA + A+S+ +    + +  I+  + I        V   F
Sbjct: 86  LRSIGTGICAAFFALIIGFPYAYIIARSKSMIFRTLGLTLILSPLAIFTISKALAVRGLF 145

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             ++    +      IF +    +  M   +YQ + ++P ++ E S+    S  Q  + +
Sbjct: 146 SAIFDENELNNNFFLIFGMVYLYIPFMVMPLYQVIKDMPNNIIEASQDLGYSKTQTVFKV 205

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL- 242
            +P+ M  ++    + +      ++ S+ ++   +   L  IG+ I       +   +  
Sbjct: 206 ILPYCMKAILSGFGVVLMMSATSIILSDKLLPNGSQKQL--IGNLINQFANTANPYDLAN 263

Query: 243 ---YAMLTMLGVIFLY 255
                ++T+  ++ +Y
Sbjct: 264 ASTLVIITLAVLLTIY 279



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 9/191 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP------ANVFFPLVVS 439
           ++   +     A II  P    I     +  +      +L+         A     L  +
Sbjct: 88  SIGTGICAAFFALIIGFPYAYIIARSKSMIFRTLGLTLILSPLAIFTISKALAVRGLFSA 147

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 LN N +L   M++    +++  +       PN+  E +     +  +    +IL
Sbjct: 148 IFDENELNNNFFLIFGMVYLYIPFMVMPLYQVIKDMPNNIIEASQDLGYSKTQTVFKVIL 207

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLG 558
           P      ++G       +  + I+S+         +   +G  I +     + +      
Sbjct: 208 PYCMKAILSGFGVVLMMSATSIILSDKLLPNGSQKQL--IGNLINQFANTANPYDLANAS 265

Query: 559 VLIMCCFVLAL 569
            L++    + L
Sbjct: 266 TLVIITLAVLL 276


>gi|261215366|ref|ZP_05929647.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
 gi|260916973|gb|EEX83834.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 3 str. Tulya]
          Length = 332

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 9/195 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTFTVVYFMNLYPG 129
           +++ V+SL+         A+ R  G      L  M  +S+P +   L   +VY       
Sbjct: 134 VTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPLFMVYSRIGIID 192

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              G  L  +        W +          +P+DL E ++    + WQ FW +  P + 
Sbjct: 193 THFGLILTYVALNIPFTTWLIDGFF----RQVPKDLAEAAQIDGCTRWQAFWQVEFPLAG 248

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG+    + +    W     +  +        LP +G     A    D   +    + M+
Sbjct: 249 PGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDWRGMCALAVVMI 307

Query: 250 GVIFLYDQLLFRPMI 264
                   ++ + ++
Sbjct: 308 VPALALTFVIQKHLV 322



 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 19/189 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 134 VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 193

Query: 449 NLWLSLLMIFGTQWYILFNV------IAGA-SAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +  L L        Y+  N+      I G     P D  E A     T W+ +  +  P 
Sbjct: 194 HFGLILT-------YVALNIPFTTWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPL 246

Query: 502 IFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             P   +  I A    WN  ++ S++    +      GL  Y AE T    +  +    +
Sbjct: 247 AGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAV 304

Query: 561 IMCCFVLAL 569
           +M    LAL
Sbjct: 305 VMIVPALAL 313


>gi|238784088|ref|ZP_04628103.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           bercovieri ATCC 43970]
 gi|238715065|gb|EEQ07062.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           bercovieri ATCC 43970]
          Length = 189

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 77/204 (37%), Gaps = 20/204 (9%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + ++++ +I++L          +   +    V+  ++ + Q+ P +  L   V       
Sbjct: 1   MLVVASSIIAVLIGVSAGVAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG--- 57

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 +E  AI A+    +  +       + ++ R + EV++   +S  Q  W + +P 
Sbjct: 58  -----FSEKPAIIALVLYGLLPILQGTITGIESVSRGIREVAQGVGMSSRQILWRVELPL 112

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +V  +  S+        A+    VG        +GS I + +   +   ++   + 
Sbjct: 113 AAPVIVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAVV 165

Query: 248 MLGVIFLYDQL---LFRPMIVWSN 268
           +  +  + D L   L R +  W  
Sbjct: 166 VALLAIITDMLFSRLSRRLSGWRE 189



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 13/186 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           VV   IIA +I +  G+ +         S ++    +   FP      + V  + +    
Sbjct: 3   VVASSIIAVLIGVSAGVAVTRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKP 62

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             + L L  +      IL   I G  +     +EVA    ++  +    + LP   P  V
Sbjct: 63  AIIALVLYGLL----PILQGTITGIESVSRGIREVAQGVGMSSRQILWRVELPLAAPVIV 118

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  T+       + ++         + T  LG+ I       +   V+ G +++    +
Sbjct: 119 AGIRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAVVVALLAI 171

Query: 568 ALNRFL 573
             +   
Sbjct: 172 ITDMLF 177


>gi|148642627|ref|YP_001273140.1| phosphate ABC transporter, permease component, PstC
           [Methanobrevibacter smithii ATCC 35061]
 gi|222445875|ref|ZP_03608390.1| hypothetical protein METSMIALI_01521 [Methanobrevibacter smithii
           DSM 2375]
 gi|148551644|gb|ABQ86772.1| phosphate ABC transporter, permease component, PstC
           [Methanobrevibacter smithii ATCC 35061]
 gi|222435440|gb|EEE42605.1| hypothetical protein METSMIALI_01521 [Methanobrevibacter smithii
           DSM 2375]
          Length = 291

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 5/206 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF +LAF++   I     +G                      +      T L ++ A+ +
Sbjct: 26  IFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEGQFGVFPMIIGSIFVTLLSLVIAVPL 85

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           SLL       +A    ++ ++L P++  +  IP + +  F +   + +      G   + 
Sbjct: 86  SLLCAIFMEEIA--PDKIKLLLKPVIQTLSGIPSVVYGFFGLTVLVPVVRQHFGGTGFSV 143

Query: 139 IFA--IFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A  I +  +     S+ Q ++  +P +  E +     + WQ   ++  P ++PG++  
Sbjct: 144 FTAALILSVMILPTIISVSQDAIKAVPGEYREAALGLGSTHWQTIRHIIFPSALPGIITA 203

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIP 221
           +++ +       +A  M+      IP
Sbjct: 204 VILGIGRAIGETLAVIMVAGNVAQIP 229



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 13/152 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVS 442
           + + +++ +I +P+ +             I   ++P  Q L+  P+ V+  F L V    
Sbjct: 72  IFVTLLSLVIAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVYGFFGLTVLVPV 131

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYI 497
               +     +++ + L++       + +V      A P +++E A     T W+  R+I
Sbjct: 132 VRQHFGGTGFSVFTAALILSVMILPTIISVSQDAIKAVPGEYREAALGLGSTHWQTIRHI 191

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           I P   P  +T  I   G A   ++   + + 
Sbjct: 192 IFPSALPGIITAVILGIGRAIGETLAVIMVAG 223


>gi|320100698|ref|YP_004176290.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
 gi|319753050|gb|ADV64808.1| binding-protein-dependent transport systems inner membrane
           component [Desulfurococcus mucosus DSM 2162]
          Length = 746

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 71/453 (15%), Positives = 154/453 (33%), Gaps = 33/453 (7%)

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT-FSMYQSLCNIPRDLEEVSRSFRLSG 176
                F   +  K+    +  +        + +   + Y S  NI    EE + +    G
Sbjct: 288 PVSSLFNTFFGFKLRVEGIVGVMLAQIVTFFPIVYLNAYNSFINIDPSTEEQAENLGAKG 347

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           ++ F  + +P ++PG+    ++        + A  +  V   +        Y+ +     
Sbjct: 348 FRLFRTVTLPLALPGIAAGSILVFVFSLEDLGAPIVFNVQSLMSYKI----YMGIRTTTG 403

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
            +   + A+  +L ++ L   L  R  +   +   + R   + P         R+   L 
Sbjct: 404 LISPEVAALGVVLLLLTLVSFLAIRNYVGMRSYAMISRGGRLNPR-------VRRPGLLG 456

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV----- 351
            I      F   L   + ++   L  +    P            S +       +     
Sbjct: 457 MIAVYLAVFPVVLFAMLPQVGVVLVSLGVLKPYPGATGIELSMPSDIFQYIGKVLSDPSI 516

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGF 410
              +   + +  +  ++  F    V Y +    I     ++  +  S + IP + + +G+
Sbjct: 517 YRYLVNTLLYAGVSVLIAVFLATAVGYSVSRLKIKWLANILDSLSTSPLAIPGLVLALGY 576

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNV 468
                      +Q           P  V+ +    L+   WL  ++ F      Y++ +V
Sbjct: 577 YYFFYILANALSQ---------LVPGAVTYLLPGSLSFATWLVFIIAFSVRRLPYVVRSV 627

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            AG      + +E A +   +  R    +ILP I  Y ++GA+   G  + A+ VS   +
Sbjct: 628 FAGFQQVHENLEEAAMNLGASRMRVVFGVILPFIIGYILSGAL--LGFIYMATEVSTSIT 685

Query: 529 WGHIHLRTTGLGAYIAE--STEKGSFPEVVLGV 559
           +G ++     L  Y+A+  +   G  P +V  +
Sbjct: 686 FGGMNDAYAPLTYYMAQNIAGAAGQGPMLVAAM 718



 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 20/214 (9%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRL 96
             E ++P DI   +   L   S+ +Y   T L    +++I++          ++   + L
Sbjct: 494 GIELSMPSDIFQYIGKVLSDPSIYRYLVNTLLYAGVSVLIAVFLATAVGYSVSRLKIKWL 553

Query: 97  GMVLVPILDIMQSIPILGFLTFTVVYF---------------MNLYPGKVIGAELAAIFA 141
             +L  +     +IP L        +F                 L PG +  A       
Sbjct: 554 ANILDSLSTSPLAIPGLVLALGYYYFFYILANALSQLVPGAVTYLLPGSLSFATWLVFII 613

Query: 142 IFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            F+  ++  +  S++     +  +LEE + +   S  +  + + +PF +  ++   +  +
Sbjct: 614 AFSVRRLPYVVRSVFAGFQQVHENLEEAAMNLGASRMRVVFGVILPFIIGYILSGAL--L 671

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
              +     S  I  G        +  Y+A  I 
Sbjct: 672 GFIYMATEVSTSITFGGMNDAYAPLTYYMAQNIA 705


>gi|266621953|ref|ZP_06114888.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
 gi|288866342|gb|EFC98640.1| glycine betaine/L-proline ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
          Length = 202

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L     +  + +   +V+SL+        A   + +   L+ +  ++ SIP L    
Sbjct: 9   PEKLYGALGQHLMLVAVTLVLSLILAAALTVCAMYFKTVSNGLIHLFSVIYSIPSLA--- 65

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                F  L P   +G + A I     +Q + +  +    L  +   + E +    ++  
Sbjct: 66  ----MFAMLIPVTGLGTKTALIVLTLYNQ-YLLLRNFTAGLNGVDSSVIEAAAGMGMTTM 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P +   +   + ++       +V++  I      I   G+G+ +   ++  +
Sbjct: 121 QILLKIRLPLAKRSVFTGIRLA-------IVSTTGIATIAATINAGGLGTILFDGLRTLN 173

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
           ++ IL+  +   G+  + +  L R
Sbjct: 174 VVKILWGTVLSAGLAIVLNAGLER 197



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V ++++ I+   + +   +   +S+ +     ++ + P+   F +++        
Sbjct: 20  LMLVAVTLVLSLILAAALTVCAMYFKTVSNGLIHLFSVIYSIPSLAMFAMLIPVTGLGTK 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  +++    Q+ +L N  AG +   +   E A+   +T  +    I LP      
Sbjct: 80  T----ALIVLTLYNQYLLLRNFTAGLNGVDSSVIEAAAGMGMTTMQILLKIRLPLAKRSV 135

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A        + +   +     +   GLG  + +     +  +++ G ++     
Sbjct: 136 FTGIRLAI-------VSTTGIATIAATINAGGLGTILFDGLRTLNVVKILWGTVLSAGLA 188

Query: 567 LALN 570
           + LN
Sbjct: 189 IVLN 192


>gi|307319394|ref|ZP_07598822.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306895016|gb|EFN25774.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 399

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 8/181 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV   + +L  G+  T    D+  +             A R     L ++V + +    
Sbjct: 148 LLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRSDLFWTEAGRHVTLALGSLVAATVVGLP 207

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--------NLYPGKVIGAELA 137
              L  +  RL   ++ +L+ +Q+IP +      +                G        
Sbjct: 208 LGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWVAANIPGAAAIGIRGIGAAP 267

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A  A+F   +  +  +    L  +P    + +R   ++  Q+   +  P + P ++  + 
Sbjct: 268 AFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILTGIR 327

Query: 198 M 198
           +
Sbjct: 328 I 328



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 71/215 (33%), Gaps = 14/215 (6%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
                   +        +   +L     +  ++      +  G+ +   W  +  +  + 
Sbjct: 118 PASGFWVLVFAFSLLVADALTRLNPGPGLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYA 177

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              D+ +      +T+   +  ++ A+++ +P+GI       + + +      +   P+ 
Sbjct: 178 NRSDLFWTEAGRHVTLA--LGSLVAATVVGLPLGILCHRVERLRAGVLNVLNAIQTIPSI 235

Query: 432 VFFPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDF 479
             F ++++ + +   N     ++             +   +   ++ N + G +  P+  
Sbjct: 236 ALFGILIAPLGWVAANIPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAA 295

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            + A    +T  +    I  P  FP  +TG     
Sbjct: 296 NDAARGIGMTDRQRLVAIEFPLAFPVILTGIRIVL 330


>gi|269795709|ref|YP_003315164.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097894|gb|ACZ22330.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 292

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 60/187 (32%), Gaps = 8/187 (4%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             +T    +V +++ +++ + + +       +    +P      A        L     S
Sbjct: 97  ALVTGRNALVGLVVGALLGVLLAVVASSAQVVDRLGEPVV---TALSVVPVVALAPVLYS 153

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            Y         ++        +  N + G        +++  +   +  +    + +P  
Sbjct: 154 MYGAASEQARVIVAGLAVFVPVYVNTLRGLRQVTPVHRDLMRALAASPRQVALTVTVPTA 213

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P+  TG   A   A  ++IV+E           +G+G++I  +    ++      VL  
Sbjct: 214 VPFVFTGLRIASSLAVISAIVAEYFGGPR-----SGIGSFITTAASGSNYARAWAYVLGG 268

Query: 563 CCFVLAL 569
               L  
Sbjct: 269 IVVGLVF 275



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+  L   + A +A+ ++ +  +  P++  +            V     LY     
Sbjct: 105 LVGLVVGALLGVLLAVVASSAQVVDRLGEPVVTALSV-------VPVVALAPVLYSMYGA 157

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E A +     +    +  +  + L  +     ++ R+   S  Q    + VP ++P +
Sbjct: 158 ASEQARVIVAGLAVFVPVYVNTLRGLRQVTPVHRDLMRALAASPRQVALTVTVPTAVPFV 217

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ S      + +E         P  GIGS+I  A    +       +L  + V 
Sbjct: 218 FTGLRIASSLAVISAIVAEYFGG-----PRSGIGSFITTAASGSNYARAWAYVLGGIVVG 272

Query: 253 FLY 255
            ++
Sbjct: 273 LVF 275


>gi|254472027|ref|ZP_05085428.1| phosphate transport system permease protein 2 [Pseudovibrio sp.
           JE062]
 gi|211959229|gb|EEA94428.1| phosphate transport system permease protein 2 [Pseudovibrio sp.
           JE062]
          Length = 615

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 61/151 (40%), Gaps = 6/151 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPI 112
           ++  +   A  +   ML  + +S       A      A K+R    ++   ++ + ++P 
Sbjct: 389 EMAGIWGAAVGSFWTMLVTLSLSFPIGVAAAIYLEEFAPKNRW-THLIEVNINNLAAVPS 447

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + F    +  F+N++ G    A +     +    +  +  +   +L  +P  + E +   
Sbjct: 448 IVFGLLGLAVFLNVF-GLPRSAPVVGGMVLALMTLPTIIIASRAALQAVPPSIREAALGV 506

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             S  Q  ++  +P +MPG++   ++ M+  
Sbjct: 507 GASRLQAVFHHVLPLAMPGILTGTIIGMAQA 537



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 81/234 (34%), Gaps = 14/234 (5%)

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
           +   F PLS++        G+     PE+F +    +        +   +V    I   W
Sbjct: 322 TGTAFIPLSSDAAVAAGQWGIEELETPESFRKFSDKE------IAYTDYLVSKGTIENQW 375

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKI 418
            SI +        ++  +      + + ++V + ++  I +   I++     +   +  I
Sbjct: 376 NSIFFKSGASREPEMAGIWGAAVGSFWTMLVTLSLSFPIGVAAAIYLEEFAPKNRWTHLI 435

Query: 419 QPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +     LAA P+ VF      + ++        P +   +L +  T   I+    A   A
Sbjct: 436 EVNINNLAAVPSIVFGLLGLAVFLNVFGLPRSAPVVGGMVLALM-TLPTIIIASRAALQA 494

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            P   +E A     +  +   + +LP   P  +TG I     A   +    +  
Sbjct: 495 VPPSIREAALGVGASRLQAVFHHVLPLAMPGILTGTIIGMAQALGETAPLLMIG 548


>gi|90818624|emb|CAJ32589.1| putative ABC transporter permease component [Paracoccus versutus]
          Length = 129

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 6/123 (4%)

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
             L+       +     AG  +   +    A +   +  +   ++IL    P   TG   
Sbjct: 1   VFLIFLAIFAPMAIAARAGVRSVSIEQIHAAYAMGASKLQVIFHVILKAALPEIFTGMRI 60

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G  W   + +E+ +         GLG  +  S E  +   V++G++++     A +  
Sbjct: 61  GIGVGWTTLVAAEMVA------AHRGLGFMVLNSAEYLASDAVIMGIIVIGILAFAFDLL 114

Query: 573 LWH 575
           +  
Sbjct: 115 IRR 117



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 58/134 (43%), Gaps = 9/134 (6%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +F IF +    M  +    + ++  +    + +   S  Q  +++ +  ++P +   M +
Sbjct: 1   VFLIFLAIFAPMAIAARAGVRSVSIEQIHAAYAMGASKLQVIFHVILKAALPEIFTGMRI 60

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
            +  GW  +VA+EM+          G+G  +  + +     A++  ++ +  + F +D L
Sbjct: 61  GIGVGWTTLVAAEMVA------AHRGLGFMVLNSAEYLASDAVIMGIIVIGILAFAFDLL 114

Query: 259 ---LFRPMIVWSNK 269
              + R +I W  K
Sbjct: 115 IRRIERALIPWKGK 128


>gi|331269701|ref|YP_004396193.1| phosphate ABC transporter inner membrane subunit PstA [Clostridium
           botulinum BKT015925]
 gi|329126251|gb|AEB76196.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           botulinum BKT015925]
          Length = 288

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVV 121
              +   ++ ++VI++          A+  + G VL  I   ++ M S+P +    F ++
Sbjct: 61  LFNSFYMLIISLVITVPVGIGAGIYLAEYAKEGKVLNSIRLCIETMASLPSIVVGLFGLL 120

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+            A   AI    + +MT     +L +IP+ ++E S     + WQ   
Sbjct: 121 FFVGTLGWGYSIIAGALSIAIIN--LPSMTTVTENALRSIPKKIKEASLGLGATKWQTIK 178

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            + +P ++P ++  ++++  
Sbjct: 179 KVILPSAIPQILTGIILASG 198



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 5/167 (2%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+ + S+ ++    +      +      + + +++ ++I   + I  GI++         
Sbjct: 36  GVPYLSLKFLFGKPSLNAGGGIGLQLFNSFYMLIISLVITVPVGIGAGIYLAEYAKEGKV 95

Query: 418 IQPF---AQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
           +       + +A+ P+ V   F L+    +       +  +L +       +        
Sbjct: 96  LNSIRLCIETMASLPSIVVGLFGLLFFVGTLGWGYSIIAGALSIAIINLPSMTTVTENAL 155

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            + P   KE +     T W+  + +ILP   P  +TG I A G  + 
Sbjct: 156 RSIPKKIKEASLGLGATKWQTIKKVILPSAIPQILTGIILASGRIFG 202


>gi|221310422|ref|ZP_03592269.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314745|ref|ZP_03596550.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319668|ref|ZP_03600962.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323945|ref|ZP_03605239.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767565|ref|NP_390377.2| phosphate ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|251757386|sp|P46339|YQGH_BACSU RecName: Full=Probable ABC transporter permease protein yqgH
 gi|225185193|emb|CAB14428.2| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 309

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-F 123
            +  ++S L         A             VL P+++++  IP +  GF+  TV+  F
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  +     G  L A   + +  +     S+   ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    V+P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + I++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAY 542
           +++P  FP  +T  +     A+  ++  ++                     + T  +G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESPFDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L+M    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|294813236|ref|ZP_06771879.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|294325835|gb|EFG07478.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
          Length = 246

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D +    +      L            ++++I LL  F  A LA         ++ +  +
Sbjct: 29  DWICGEYLRTRAQELTDATVEHIWITGTSVLIGLLVAFPLALLARSRPAFAGPVLGLTTL 88

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + +IP L           +L    +  +    +  +    +  +  ++   L  +P +  
Sbjct: 89  LYTIPSLAMF--------SLLLPLLGLSAALVVTGLVLYSLTILVRNILAGLAAVPEEAR 140

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R       +  W + +P ++P L+  + M+        V++  +     +I   G+G
Sbjct: 141 EAARGLGYGPARLLWEVELPLALPALMAGVRMA-------TVSTVALTTVGALIGRGGLG 193

Query: 227 SYIALAIKEQDLLAILYAML 246
             I   ++      +L A +
Sbjct: 194 DLIDDGVQTTFKAQVLAASV 213



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     ++I  ++  P+ +    RP  +  +     LL   P+   F L++  +     
Sbjct: 51  IWITGTSVLIGLLVAFPLALLARSRPAFAGPVLGLTTLLYTIPSLAMFSLLLPLLGLSAA 110

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG +A P + +E A        R    + LP   P  
Sbjct: 111 LVVTGLVLYSLTI----LVRNILAGLAAVPEEAREAARGLGYGPARLLWEVELPLALPAL 166

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +   G       GLG  I +  +     +V+   ++
Sbjct: 167 MAGVRMATVSTVALTTVGALIGRG-------GLGDLIDDGVQTTFKAQVLAASVL 214


>gi|119486752|ref|ZP_01620727.1| Molybdate ABC transporter, permease protein [Lyngbya sp. PCC 8106]
 gi|119456045|gb|EAW37178.1| Molybdate ABC transporter, permease protein [Lyngbya sp. PCC 8106]
          Length = 632

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 22/199 (11%)

Query: 73  LSAMVISLLFTFVYATLAAK-----SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
             A +I+ + TF   T++A+       +   ++  IL     +P        +V F    
Sbjct: 16  FRAAIIATIITFFLGTISARLMFSYHGKGKGLIDGILTAPLVLPPTVVGFLLLVLFGRYG 75

Query: 128 P---------GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           P           VI    A + A        M  +   +   I R L   +R+   S W 
Sbjct: 76  PLGKLLSTVNFSVIFTWYATVIAAIVVAFPLMYKTALGAFKQIDRSLLACARTLGASEWT 135

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KE 235
            FW + +P + PGL    M++ +       A+ M+        +PG    I +AI    E
Sbjct: 136 IFWRVMLPLAKPGLFSGTMLAFARSLGEFGATLMLAG-----SIPGRTQTIPVAIFFAAE 190

Query: 236 QDLLAILYAMLTMLGVIFL 254
              + + +A + ++ VI L
Sbjct: 191 GGRMDVAFAWVIVILVISL 209



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 25/228 (10%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L   +      +   I    +G I     +    +    G I       L++  +++   
Sbjct: 9   LSPAFISFRAAIIATIITFFLGTISARLMFS--YHGKGKGLIDGILTAPLVLPPTVVGFL 66

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + +  G          P  +LL+                 + +    + +++      + 
Sbjct: 67  LLVLFGRY-------GPLGKLLSTV--------------NFSVIFTWYATVIAAIVVAFP 105

Query: 464 ILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +++    GA           A +   + W  +  ++LP   P   +G + A   +     
Sbjct: 106 LMYKTALGAFKQIDRSLLACARTLGASEWTIFWRVMLPLAKPGLFSGTMLAFARSLGEFG 165

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            + + + G I  RT  +   I  + E G        V+++    L + 
Sbjct: 166 ATLMLA-GSIPGRTQTIPVAIFFAAEGGRMDVAFAWVIVILVISLGII 212


>gi|307326589|ref|ZP_07605783.1| phosphonate ABC transporter, inner membrane subunit [Streptomyces
           violaceusniger Tu 4113]
 gi|306887783|gb|EFN18775.1| phosphonate ABC transporter, inner membrane subunit [Streptomyces
           violaceusniger Tu 4113]
          Length = 602

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/458 (12%), Positives = 135/458 (29%), Gaps = 45/458 (9%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +   +   + + +    L    +  V      +         L     +T   ++SA V+
Sbjct: 48  VIGGVWAFIALRLNIATLADSADNAVAFLPRTLPLDFPPAGELFSLIWQTLAIVVSATVL 107

Query: 79  SLLFTFVYATLAAKSRR----LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           S++ +   A LAA++        +    ++ + +++P + F       F       V+  
Sbjct: 108 SVVLSVPLALLAARNTTPGTAARLASRGVIVLCRAVPEVVFAIAAFRVFGLGGMTGVVAL 167

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + ++  +              ++           R+      Q+     +P ++P LV 
Sbjct: 168 GVHSVGMVGKL--------YADAVEQTDEGPRTALRATGAGRLQQITAAVLPQALPSLVA 219

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             +  +            + V        G+G  ++ AI   D    +   L +L + F+
Sbjct: 220 TALHRLDINLRASAVLGFVGVN-------GLGYALSTAITTLDYQRAMAIALVLLLLCFV 272

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG-----YSSWNFFSPL 309
            +       I  + +  L +               +    +   G       S    +  
Sbjct: 273 AES------ISGAIRRTLLQDVTAARRPRRRRPERQGARRVERPGDTAPSRPSSGAPAAT 326

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
           +     +    G                +R ++++      V   V  G++W ++     
Sbjct: 327 TAIAIAVSPADGGTAVRRSLPRWDARRIRRTTWLVLTVALVVASAVRSGLSWNTLRRGAE 386

Query: 370 HFTY----------QDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFR----PHI 414
            F              +   +W    +T+   +   +I  ++ +P+G          P  
Sbjct: 387 SFFPTVGDFLPPGTGGIGDQLWADLWVTLQIALAGTLIGLVLALPLGTLAARNVVGSPRA 446

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           +   +    L+ A P  V   + V       ++  L L
Sbjct: 447 ARFFRTVILLVRAIPELVLAIVFVVVTGLGAVSGALAL 484


>gi|228993532|ref|ZP_04153441.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
           12442]
 gi|228999567|ref|ZP_04159145.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
 gi|229007125|ref|ZP_04164751.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
 gi|228754170|gb|EEM03589.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
 gi|228760278|gb|EEM09246.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
 gi|228766247|gb|EEM14892.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
           12442]
          Length = 154

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEV 482
           +L A P     P+++         PN+  S+ M +  +    +  + +      +++ +V
Sbjct: 1   MLNAMPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKV 55

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             +F    W+ ++ +ILP  FP  ++      G +W   I  E+       +   GLG  
Sbjct: 56  MDTFGANKWQCYKQVILPSSFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYL 109

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I+   +  +F  V+L VL+ C     +  F+
Sbjct: 110 ISYGFQVFNFTLVLLSVLLTCALATLMYVFV 140



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 59/154 (38%), Gaps = 14/154 (9%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++ ++P +      +V F       +    + +I              +Y +   +  + 
Sbjct: 1   MLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNY 52

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +V  +F  + WQ +  + +P S P ++  + +++   W  V+  E++V         G+
Sbjct: 53  IKVMDTFGANKWQCYKQVILPSSFPAIISTLKVNVGLSWVGVIFGELLV------SKQGL 106

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G  I+   +  +   +L ++L    +  L    +
Sbjct: 107 GYLISYGFQVFNFTLVLLSVLLTCALATLMYVFV 140


>gi|254394035|ref|ZP_05009118.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|197707605|gb|EDY53417.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
          Length = 237

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ IG     +      A    A P      L+V       L+       L+     
Sbjct: 61  LPIGLLIGHTGRGAFLAINLASFGRALPTVG---LIVLVFLASGLSMTPVYVSLVAL-AV 116

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N  AG  A   D ++ A    +   +    + +P   P  +TG   A       +
Sbjct: 117 PSVVTNTYAGMRAVDPDTRDAARGQGMRAHQVLLRVEIPLALPLIMTGLRLALIQVVATA 176

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++   S+G       GLG Y+ +   +    +
Sbjct: 177 TIAAYVSFG-------GLGRYVFDGLAQRDLVQ 202



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L   + R   + + +    +++P +G +    +          +     A+ ++ 
Sbjct: 61  LPIGLLIGHTGRGAFLAINLASFGRALPTVGLIVLVFLASGLSMTPVYVSLVALAVPSVV 120

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T        + Y  +  +  D  + +R   +   Q    + +P ++P ++  + +++   
Sbjct: 121 T--------NTYAGMRAVDPDTRDAARGQGMRAHQVLLRVEIPLALPLIMTGLRLALIQV 172

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 +  +  G       G+G Y+   + ++DL
Sbjct: 173 VATATIAAYVSFG-------GLGRYVFDGLAQRDL 200


>gi|29830049|ref|NP_824683.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29607159|dbj|BAC71218.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 213

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 68/186 (36%), Gaps = 15/186 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L           L+A+   LL +   A +A + R L   L+ + +++ +IP +      +
Sbjct: 15  LTGLTLSHLQAALTAVFFGLLISLPLAVIAHRIRPLRGFLLGLSNVLFTIPSIAIFVLLL 74

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                     VIG  +  +  +          +  + L ++P   +E +++      +  
Sbjct: 75  PVSGLTRTTTVIGLTVYTLVVLLR--------NTVEGLDSVPVKTKEAAKAMGTRPLRTL 126

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P ++  + ++        V S  +V   T I   G+G       +      
Sbjct: 127 LTVELPLALPVIMAGVRIA-------TVMSISLVSVATYIGDGGLGQLFTDGFQRNFPTP 179

Query: 241 ILYAML 246
           ++  ++
Sbjct: 180 VIVGVV 185



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +  L    +   +  +    +I +P+ +       +   +   + +L   P+   F L++
Sbjct: 15  LTGLTLSHLQAALTAVFFGLLISLPLAVIAHRIRPLRGFLLGLSNVLFTIPSIAIFVLLL 74

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      + L++     T   +L N + G  + P   KE A +      R    + 
Sbjct: 75  PVSGLTRTTTVIGLTVY----TLVVLLRNTVEGLDSVPVKTKEAAKAMGTRPLRTLLTVE 130

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G   A   + +   V+     G       GLG    +  ++     V++G
Sbjct: 131 LPLALPVIMAGVRIATVMSISLVSVATYIGDG-------GLGQLFTDGFQRNFPTPVIVG 183

Query: 559 VLI 561
           V++
Sbjct: 184 VVL 186


>gi|310822864|ref|YP_003955222.1| phosphate ABC transporter permease pstc [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395936|gb|ADO73395.1| Phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 83/207 (40%), Gaps = 18/207 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
             FT+Q V  +  +  I +F   +    ++ ++ +P+G+             +   ++P 
Sbjct: 90  PTFTWQPVSSIPKVSMIPLFIGTLKTTFVSMLVAVPLGVAGALFAAEFAPRRLREFLKPI 149

Query: 422 AQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
            +LLA  P+ V     +  ++        +    N  ++ L +      ++F V     +
Sbjct: 150 IELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAGLGLALAIVPVIFTVAEDALT 209

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P  ++E + +   T W     ++LP   P  +   +   G A   +++  + + G+  
Sbjct: 210 AVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGFGRAIGETMIILM-ASGNAA 268

Query: 534 LRTTGLGAYI--AESTEKGSFPEVVLG 558
           + ++ LG  +    +T      EVV+G
Sbjct: 269 IVSSSLGDSVRSLSATIAAEMGEVVVG 295



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY- 122
           T      +M++++      A  AA+   RRL   L PI++++  IP  +LGF    V+  
Sbjct: 112 TLKTTFVSMLVAVPLGVAGALFAAEFAPRRLREFLKPIIELLAGIPSVVLGFFALMVLAT 171

Query: 123 -FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              + +        + A   +  + V  +      +L  +PR   E S +   + W+  W
Sbjct: 172 LLQDTFGFTYRLNAVVAGLGLALAIVPVIFTVAEDALTAVPRSYREASLALGATPWETAW 231

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P + PG++   ++     
Sbjct: 232 KVVLPAAAPGILAACVLGFGRA 253


>gi|83593753|ref|YP_427505.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83576667|gb|ABC23218.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 223

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 77/206 (37%), Gaps = 16/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L +    T   +++++ I          L A S          L  +  P+++  +S+P 
Sbjct: 13  LGKATLETLYMVVASLGIGTALGLPLGVLLATSGPGELFEMPWLRRIAGPVVNATRSVP- 71

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  + +  +   +  ++  +   L E + + 
Sbjct: 72  FIILAVAIIPFTRLIAGTSIGTS-AAIVPLTVAAIPFIARIIEGAVREVDGGLVEAAHAM 130

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                Q  + + +P ++P ++  + ++       ++    +V       L  +G  I   
Sbjct: 131 GARPLQVVFKVLLPEALPAILHGLTLTA----VTLIGYSAMVGAVGAGGLGDLG--IRYG 184

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
            +      ++  ++T++ ++     L
Sbjct: 185 YQRFRPDVMIAVVITLIVIVQAVQTL 210



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 67/230 (29%), Gaps = 21/230 (9%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKI 418
           ++    +     +      T++ VV  + I + + +P+G+ +           P +    
Sbjct: 1   MLETLFHTLAPLLGKATLETLYMVVASLGIGTALGLPLGVLLATSGPGELFEMPWLRRIA 60

Query: 419 QPFAQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
            P      + P    A    P     ++   +  +  +  L +     +I   +      
Sbjct: 61  GPVVNATRSVPFIILAVAIIPF-TRLIAGTSIGTSAAIVPLTV-AAIPFIARIIEGAVRE 118

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                 E A +      +    ++LP   P  + G           S +      G +  
Sbjct: 119 VDGGLVEAAHAMGARPLQVVFKVLLPEALPAILHGLTLTAVTLIGYSAMVGAVGAGGLGD 178

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                G        +   P+V++ V+I    ++   + L   L     + 
Sbjct: 179 LGIRYGY-------QRFRPDVMIAVVITLIVIVQAVQTLGDRLARRADKR 221


>gi|332703031|ref|ZP_08423119.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332553180|gb|EGJ50224.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 388

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 65/154 (42%), Gaps = 10/154 (6%)

Query: 59  HSLPQYASRTTLRMLSAM--VISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQS 109
             LP+ A      + SA   +++L F+F    L A          RL  ++   ++ + +
Sbjct: 158 SKLPEMAGVWAALVGSAYVLLLTLAFSFPVGVLTAVYLEEFAPDNRLTQIVEVNINNLAA 217

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP + +    +  F+N +      A +  +  +    +  +  S   +L ++P  + E +
Sbjct: 218 IPSILYGLLGLAIFINFFHVPRSSALVGGL-TLALMTMPVIIISTRAALRSVPGSIREAA 276

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                + WQ  W+  +P ++PG++   ++ ++  
Sbjct: 277 YGIGATPWQVVWHHTLPLALPGVLTGTIIGLARA 310



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 21/200 (10%)

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +++      PVG+              ++  ++     LAA P+ ++  L ++    +  
Sbjct: 177 LLLTLAFSFPVGVLTAVYLEEFAPDNRLTQIVEVNINNLAAIPSILYGLLGLAIFINFFH 236

Query: 447 NPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            P        L +   T   I+ +  A   + P   +E A     T W+   +  LP   
Sbjct: 237 VPRSSALVGGLTLALMTMPVIIISTRAALRSVPGSIREAAYGIGATPWQVVWHHTLPLAL 296

Query: 504 PYYVTGAIT----ACGGAWNASIVSEVA----SWGHIHLRTTGLGAYIAESTEKGS---F 552
           P  +TG I     A G +    I+  +A    +   +    T L A I   +        
Sbjct: 297 PGVLTGTIIGLARAIGESAPLLIIGMMAYIPDAPHSVTEAATALPAQIYTWSTDSQRAFT 356

Query: 553 PEVVLGVLIMCCFVLALNRF 572
                 ++++   +L++N  
Sbjct: 357 ERTAAAIVVLLAVLLSMNAL 376


>gi|320010531|gb|ADW05381.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 215

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +    +   MVI+ L   +   ++ +S   G + +     + +IP L  +  
Sbjct: 12  QQLLTDTYQHASAVFQCMVIATLLGVLIGVVSYRSNWGGSLAITSTSAILTIPSLAAIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          +  +    +  +  +    L  +   L + ++   +S  +
Sbjct: 72  LIPLVGLGVPP--------TVIILTLYGLLPIVRNCIVGLRGVDPSLVDAAKGIGMSRTR 123

Query: 179 KFWYLGVPFSMPGLVWNMMMS----MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +   + +P + P ++  + +S    M        AS   +  +    L  +GS  A AI 
Sbjct: 124 RLLKVELPLAWPPILTGIRVSTQMLMGIAAIAAYASGPGLGNEIFGGLASLGS--ANAIN 181

Query: 235 EQDLLAILYAMLTML 249
           +     I   +L +L
Sbjct: 182 KVLAGTIGIVILALL 196



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA+++ + +G+         S        +   P+     L++  V        
Sbjct: 25  VFQCMVIATLLGVLIGVVSYRSNWGGSLAITSTSAILTIPSLAAIGLLIPLVGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A    ++  R    + LP  +P  +TG
Sbjct: 85  IILTLYGLL----PIVRNCIVGLRGVDPSLVDAAKGIGMSRTRRLLKVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +     G    +A      +  +V+ G + +    L  
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNEIFG---GLASLGSANAINKVLAGTIGIVILALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|224370048|ref|YP_002604212.1| ABC-type glycine betaine/proline transport system, inner membrane
           permease protein [Desulfobacterium autotrophicum HRM2]
 gi|223692765|gb|ACN16048.1| ABC-type glycine betaine/proline transport system, inner membrane
           permease protein [Desulfobacterium autotrophicum HRM2]
          Length = 243

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 67/195 (34%), Gaps = 17/195 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            +    +  +M+ + +       +  +   R+   + + I+ + Q+IP L  L   + + 
Sbjct: 47  LQHLHMVSLSMIFATIIGVTAGIVLTRQRFRKYTGLCMYIIGLGQTIPSLAVLALAMSFL 106

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                         A+FA+    +  +  +    +  +P +L +  +   +   +    +
Sbjct: 107 GLGL--------KPAVFALTIYSILPIARNTLAGITAVPPELIDAGKGMGMPPMRILMEV 158

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P +M  ++    +++         + +I  G       G+G  I   I       +L 
Sbjct: 159 EIPNAMKVILTGFRVALIINIGTAALAYVIGAG-------GLGDLIFTGINLMQTDKLLA 211

Query: 244 AMLTMLGVIFLYDQL 258
             + +  +    D L
Sbjct: 212 GAIPVTLLALFADFL 226



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 13/215 (6%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI--S 415
           G+ ++  G I       +   ++ L    +  V + +I A+II +  GI +  +     +
Sbjct: 21  GVTFERTGLIELLSDPYEYPVIMELFLQHLHMVSLSMIFATIIGVTAGIVLTRQRFRKYT 80

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
                   L    P+     L +S +          L++  I      I  N +AG +A 
Sbjct: 81  GLCMYIIGLGQTIPSLAVLALAMSFLGLGLKPAVFALTIYSIL----PIARNTLAGITAV 136

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P +  +      +   R    + +P      +TG   A       + ++ V   G     
Sbjct: 137 PPELIDAGKGMGMPPMRILMEVEIPNAMKVILTGFRVALIINIGTAALAYVIGAG----- 191

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             GLG  I          +++ G + +    L  +
Sbjct: 192 --GLGDLIFTGINLMQTDKLLAGAIPVTLLALFAD 224


>gi|28210827|ref|NP_781771.1| phosphate transport system permease protein pstC [Clostridium
           tetani E88]
 gi|28203265|gb|AAO35708.1| phosphate transport system permease protein pstC [Clostridium
           tetani E88]
          Length = 306

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 16/190 (8%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           +   + L  L A++IS   +   A        +     L P L++   IP + +    +V
Sbjct: 87  FILGSILVSLGALLISTPISIALAVFMNHISPKLGQKFLQPALELFVGIPSVVYGWIGIV 146

Query: 122 YFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            F+ +      G     LA +  +    +  +      ++ +IP+D  E S +   + WQ
Sbjct: 147 LFIPIIKRSFGGLGFSLLAGMIVLSIMILPTIVNISSDAIKSIPKDYVEASLALGATRWQ 206

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P +  G++ ++++ ++  +   +A +M+           IG+ I L     D 
Sbjct: 207 TIIKVVLPSAKSGILTSIVLGLARAFGEALAVQMV-----------IGNTIKLPRGVLDP 255

Query: 239 LAILYAMLTM 248
            A L ++LTM
Sbjct: 256 TATLTSILTM 265



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 13/208 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +++++  F F     + +   +    +I +     D     +   I +   +++ + A +
Sbjct: 41  LTFLIICFIFLKGINIFLKDGYSLKEFIFSSSWNPDGENPTFGSKIFILGSILVSLGALL 100

Query: 400 IWIPVGIWIG-----FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLN 447
           I  P+ I +        P +    +QP  +L    P+ V+  + +         S+  L 
Sbjct: 101 ISTPISIALAVFMNHISPKLGQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLG 160

Query: 448 PNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            +L   ++++       + N+      + P D+ E + +   T W+    ++LP      
Sbjct: 161 FSLLAGMIVLSIMILPTIVNISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGI 220

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHL 534
           +T  +     A+  ++  ++     I L
Sbjct: 221 LTSIVLGLARAFGEALAVQMVIGNTIKL 248


>gi|256376182|ref|YP_003099842.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255920485|gb|ACU35996.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 258

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 87/243 (35%), Gaps = 16/243 (6%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           +  D L  ++      +L+ G+       D+  I   +++  SL        +  L    
Sbjct: 16  SRADGLRLLVQPAATLLLVGGVLLWAFSLDLDSIEQQSINASSLLTATWDHLVISLVVTA 75

Query: 78  ISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           + +        L  +   RR   +++ +  I Q+ P +G L   V+YFM      +    
Sbjct: 76  LVVAIAVPLGVLVTRRWARRAAPLVLGLATIGQAAPAIGVL---VLYFMATGAEGM---- 128

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            AA+  I    +  +  +    L  +   L + +R   +S       + +P ++P ++  
Sbjct: 129 WAAVVPITFYSLLPVLRNTVVGLQGVDPALVDAARGIGMSPLTVLRRVELPLAVPLILAG 188

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +  ++         +  +  G       G+G  I    K   +  ++   +  +G+  L 
Sbjct: 189 LRTALVLAVGVATLAVFVNGG-------GLGLLIDTGYKLARVPVLVTGAVLAVGLALLV 241

Query: 256 DQL 258
           D L
Sbjct: 242 DWL 244



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 10/181 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV-FFPLVVSCVSYYHLNPN 449
           +V+  +   I +P+G+ +      + +  P    LA          ++V           
Sbjct: 71  LVVTALVVAIAVPLGVLV--TRRWARRAAPLVLGLATIGQAAPAIGVLVLYFMATGAEGM 128

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               + + F +   +L N + G         + A    ++     R + LP   P  + G
Sbjct: 129 WAAVVPITFYSLLPVLRNTVVGLQGVDPALVDAARGIGMSPLTVLRRVELPLAVPLILAG 188

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             TA   A   + ++   + G       GLG  I    +    P +V G ++     L +
Sbjct: 189 LRTALVLAVGVATLAVFVNGG-------GLGLLIDTGYKLARVPVLVTGAVLAVGLALLV 241

Query: 570 N 570
           +
Sbjct: 242 D 242


>gi|325261786|ref|ZP_08128524.1| choline transporter [Clostridium sp. D5]
 gi|324033240|gb|EGB94517.1| choline transporter [Clostridium sp. D5]
          Length = 210

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +            +++SL+       +A  S++ G +LV I  ++ S+P L       
Sbjct: 20  LLEALLEHLQITAVTLLLSLIIASALTIMAIYSKKTGEILVHIFSVLYSVPSLA------ 73

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F  L P   +G   A I  +  +Q + +  +    L  +   + E +    +   Q  
Sbjct: 74  -MFAFLIPVTGLGKTTAVIVLVVYNQ-YLLLRNFISGLYGVDPAVVEAAEGLGMRRMQVL 131

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P +   L   + ++       VV++  I     +I   G+G+ +   ++  +++ 
Sbjct: 132 CQIRIPLAKKALFTGIQLA-------VVSTIGIATIAAMINAGGLGTILFDGLRTLNVIK 184

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+   +   G+    + + 
Sbjct: 185 IVIGSILSAGLALGINAIF 203



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +    V ++++ II   + I   +       +     +L + P+   F  ++        
Sbjct: 28  LQITAVTLLLSLIIASALTIMAIYSKKTGEILVHIFSVLYSVPSLAMFAFLIPVTGLGKT 87

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  ++++   Q+ +L N I+G         E A    +   +    I +P      
Sbjct: 88  T----AVIVLVVYNQYLLLRNFISGLYGVDPAVVEAAEGLGMRRMQVLCQIRIPLAKKAL 143

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
            TG   A       + ++ + + G       GLG  + +     +  ++V+G ++     
Sbjct: 144 FTGIQLAVVSTIGIATIAAMINAG-------GLGTILFDGLRTLNVIKIVIGSILSAGLA 196

Query: 567 LALNRFL 573
           L +N   
Sbjct: 197 LGINAIF 203


>gi|212638724|ref|YP_002315244.1| phosphate ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212560204|gb|ACJ33259.1| ABC-type phosphate transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 293

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS------RTTLRMLSA 75
           L     V G+I +++   +  T     ++   +       P+ A        +   M+  
Sbjct: 27  LFFLATVFGLIVLIVLLYRILTQAIGWLNFDFLNNFPSRRPEDAGIKAGLVGSLWLMVIV 86

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             +SL+     A      AK  R    +   +  +  +P + F    +  F+      + 
Sbjct: 87  APVSLILGVGTAIYLEEYAKKNRFTDFIQTNISNLAGVPSIVFGLLGLTLFVREL--NLG 144

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LAA   +    +  +  +  ++L  +P  L E S     + WQ  + + +P ++PG+
Sbjct: 145 RSILAAGLTMSLLVLPVIVVAAQEALRAVPNQLREASYGMGATKWQTIYRIVLPAAIPGI 204

Query: 193 VWNMMMSMSGG 203
           +   ++++S  
Sbjct: 205 LTGSILALSRA 215



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 6/184 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
             + L +    +   +   I W +  ++ N  + +     I  G + +++ +V++  ++ 
Sbjct: 32  TVFGLIVLIVLLYRILTQAIGWLNFDFLNNFPSRRPEDAGIKAGLVGSLWLMVIVAPVSL 91

Query: 399 IIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           I+ +   I++     +   +  IQ     LA  P+ VF    L +           L   
Sbjct: 92  ILGVGTAIYLEEYAKKNRFTDFIQTNISNLAGVPSIVFGLLGLTLFVRELNLGRSILAAG 151

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L M       I+        A PN  +E +     T W+    I+LP   P  +TG+I A
Sbjct: 152 LTMSLLVLPVIVVAAQEALRAVPNQLREASYGMGATKWQTIYRIVLPAAIPGILTGSILA 211

Query: 514 CGGA 517
              A
Sbjct: 212 LSRA 215


>gi|121535084|ref|ZP_01666901.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus
           carboxydivorans Nor1]
 gi|121306334|gb|EAX47259.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus
           carboxydivorans Nor1]
          Length = 297

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 86/217 (39%), Gaps = 14/217 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA--- 75
           +F   AF++ + I++I++   Q+  +    V      L     P          ++    
Sbjct: 23  LFVASAFLMTVIILSIIIFVGQQGLLTFKDVRPEEFFLSTKWDPTEGHYGAFSFIAGSVY 82

Query: 76  -MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFM 124
             ++++LF        A          L  ++ P  D+  +IP + +    LT  V +  
Sbjct: 83  VTLLAVLFGTPLGLAGAIFMAKIAPPWLRQIMRPATDLYVAIPSVVYGFVGLTVLVPFIR 142

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +        LAA   +    +  +      ++  +PR LEE S +   + WQ    + 
Sbjct: 143 VQFGVNTGFGLLAAAVILAIMILPTIISISEDAIRAVPRALEEGSLALGATRWQTITGVI 202

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P ++PG++ +++++M+      +A +M++     + 
Sbjct: 203 LPAALPGILTSVILAMARAVGETMAVQMVIGNTPQLA 239



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
           V + ++A +   P+G+           P +   ++P   L  A P+ V+         P 
Sbjct: 81  VYVTLLAVLFGTPLGLAGAIFMAKIAPPWLRQIMRPATDLYVAIPSVVYGFVGLTVLVPF 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +            L  ++++       I+        A P   +E + +   T W+    
Sbjct: 141 IRVQFGVNTGFGLLAAAVILAIMILPTIISISEDAIRAVPRALEEGSLALGATRWQTITG 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP   P  +T  I A   A   ++  ++       L  +
Sbjct: 201 VILPAALPGILTSVILAMARAVGETMAVQMVIGNTPQLAKS 241


>gi|159040216|ref|YP_001539469.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157919051|gb|ABW00479.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 229

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 54/143 (37%), Gaps = 8/143 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++       T     A++I++L     A  A   R L   ++ +  ++ ++P L   
Sbjct: 24  NSDTILAALREHTSLTARAVLIAVLIAVPLAVAAYWFRALAGPILVVTGVLYTVPSLALF 83

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F   Y             +  +  +    +  +  +    L  +P ++ E +       
Sbjct: 84  AFLAPYLGIG--------AVTVLTVVALYALLVIVRNALAGLTQVPPEVREAAEGMGYGR 135

Query: 177 WQKFWYLGVPFSMPGLVWNMMMS 199
           W + + + +P ++PG++  + ++
Sbjct: 136 WGRLFRIELPLALPGILTGLRLA 158



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++IA +I +P+ +   +   ++  I     +L   P+   F  +   +    +     +
Sbjct: 42  AVLIAVLIAVPLAVAAYWFRALAGPILVVTGVLYTVPSLALFAFLAPYLGIGAVTVLTVV 101

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L  +      I+ N +AG +  P + +E A       W     I LP   P  +TG   
Sbjct: 102 ALYALLV----IVRNALAGLTQVPPEVREAAEGMGYGRWGRLFRIELPLALPGILTGLRL 157

Query: 513 A 513
           A
Sbjct: 158 A 158


>gi|15673701|ref|NP_267875.1| phosphate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281492310|ref|YP_003354290.1| phosphate ABC transporter permease [Lactococcus lactis subsp.
           lactis KF147]
 gi|12724737|gb|AAK05817.1|AE006402_5 phosphate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281375974|gb|ADA65465.1| Phosphate ABC transporter, permease protein [Lactococcus lactis
           subsp. lactis KF147]
 gi|326407185|gb|ADZ64256.1| phosphate ABC transporter permease [Lactococcus lactis subsp.
           lactis CV56]
          Length = 307

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF 115
           V +LP +     + +LSA+V +  F             +    +L P+++++  IP + +
Sbjct: 82  VGALPMFTGSLIVTVLSALV-ATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVY 140

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               LT  V    N++ G      L+ +F +F   +  +T     ++  +P   +E S  
Sbjct: 141 GFIGLTVVVPAIRNVF-GGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLG 199

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + WQ  W + +  + PG++  ++  M+  +   +A +M+V    ++P
Sbjct: 200 LGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMP 249



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSC 440
           +++ ++++++  P  I  G         +    +QP  +LL   P+ V+      +VV  
Sbjct: 92  LIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPA 151

Query: 441 V--SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   +      L   + ++F      +    +    A P+ +KE +     T W+    +
Sbjct: 152 IRNVFGGTGLGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRV 211

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +L    P  +T  I     A+  ++  ++     + +    +
Sbjct: 212 LLRAATPGILTAVIFGMARAFGEALAIQMVVGNAVMMPKDLI 253


>gi|305675152|ref|YP_003866824.1| phosphate ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|305413396|gb|ADM38515.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 309

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  ++S L         A             VL P+++++  IP + +    LT  V +
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                      + LA    +    +  +T     ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSIMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    V+P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + I++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSIMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAY 542
           +++P  FP  +T  +     A+  ++  ++                     + T  +G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESLFDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L+M    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|328951024|ref|YP_004368359.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451348|gb|AEB12249.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 254

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 51/145 (35%), Gaps = 11/145 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             + +   RT   +L +  IS+L       LA   A       ++  + +  Q++P L  
Sbjct: 47  GDMLRLGLRTIELVLISSGISVLIAVPLGILATRPAYREEFAPIVSGLANAGQTVPSLAV 106

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +                      I A+  + +  +  +    L ++ R   +      ++
Sbjct: 107 IAIAFPVLGFGV--------WPTIVALVINGLLPIVRNTIAGLESVDRAQLDAGLGMGMT 158

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSM 200
             Q  W + +P ++P ++  +  S+
Sbjct: 159 PRQLLWQVELPHAVPVILAGIRTSV 183



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 9/142 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANV 432
             ++ LG  T+  V++   I+ +I +P+GI    RP    +  P    LA      P+  
Sbjct: 47  GDMLRLGLRTIELVLISSGISVLIAVPLGIL-ATRPAYREEFAPIVSGLANAGQTVPSLA 105

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              +    + +          + ++      I+ N IAG  +      +      +T  +
Sbjct: 106 VIAIAFPVLGFG----VWPTIVALVINGLLPIVRNTIAGLESVDRAQLDAGLGMGMTPRQ 161

Query: 493 WWRYIILPGIFPYYVTGAITAC 514
               + LP   P  + G  T+ 
Sbjct: 162 LLWQVELPHAVPVILAGIRTSV 183


>gi|227820731|ref|YP_002824701.1| phosphate ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
 gi|227339730|gb|ACP23948.1| phosphate ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 440

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 10/159 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSA--MVISLLFTFVYATLA-------AKSRRLGMVLVPIL 104
            +    S P+ A      + SA  M+I L+ +      A       A   RL  ++   +
Sbjct: 205 FSFGASSRPEAAGVGVALVGSAYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNI 264

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + + ++P + +    +  F+N + G    A L   F +    +  +  +   +L  +P  
Sbjct: 265 NNLAAVPSIVYGLLGLAVFVN-FAGMPRSAALVGGFVLTLMTLPTIIIATRAALKAVPPS 323

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +   +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 324 IRSAALGLGASKMQTIFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     +++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALVGSAYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P         ++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLAVFVNFAGMPRSAALVGGFVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQT 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 IFHHVLPLAMPGILTGTIIGLAHA 362


>gi|209885966|ref|YP_002289823.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
 gi|209874162|gb|ACI93958.1| binding-protein-dependent transport systems inner membrane
           component [Oligotropha carboxidovorans OM5]
          Length = 575

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 76/514 (14%), Positives = 159/514 (30%), Gaps = 52/514 (10%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNL 126
           +      A+V +  F    A +  +    G VL+  L ++  I P         + F   
Sbjct: 82  SIYASFMAVVWASAFAIPLAYITTRFEFKGAVLIQTLGVLPLIMPPFAGAIAMQLLFGRT 141

Query: 127 YPGKVIGAELAAIFAIFTSQV------------WNMTFSMYQSLCNIPRDLEEVSRSFRL 174
               ++  +       F   +              +  ++  SL NI R +EE +++   
Sbjct: 142 GTVNLLLDDWFGFTLPFMEGLNGVILVQSVHYFPFILLNLVASLRNIDRSMEEAAQNLGC 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G + F  +  P +MPG +     ++     F   +  +++    +  P        A  
Sbjct: 202 RGLRLFRRIIFPLAMPGYIAGA--ALVFIKVFDDLATPLLLNVQDMLAP-------QAYL 252

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
               + I   M  ++ V+ +     F    +W++   L      Y           K   
Sbjct: 253 RITSMGIADPMGYVISVVLIA----FSVFSLWAS--TLVTKGKDYSTVQRGGGGLSKRRM 306

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
            +     ++     +   V      L ++ F    +F  L     +S+   IF       
Sbjct: 307 NKVDTIVAYGIIFAILAIVLAPHVGLLLLSFATVWSFAPLPDGYTLSHYKVIFDESS-QL 365

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW-IGFRPH 413
           V   + + +I  ++   +    +  +      + R  +  I  + + +P  +  IG+   
Sbjct: 366 VTNTLLYATIAGVI-GVSLGTAIAYLSQRTKAIGRHALDYIATAPLAVPGVVLGIGYLRT 424

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
                 P    LAAF            +          L   M   +         AG  
Sbjct: 425 FYDIQLPDGTSLAAF-----------WIMLGIALGIRRLPYAMRACS---------AGLQ 464

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                 +E A +  +   +  R I++P +    V G +T+   A      + +      +
Sbjct: 465 QVSVSLEEAAENVGVAKPKTIRRIVVPLMAGGIVAGFVTSFATAAVELSATMMLVQSTDN 524

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
              +  G Y+   +  G  P   LGV+ +    +
Sbjct: 525 APLS-YGLYVFMQSPAGRGPGAALGVIAVIIVGV 557


>gi|315657064|ref|ZP_07909949.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492456|gb|EFU82062.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 358

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 98/269 (36%), Gaps = 29/269 (10%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVD-IVPITLDVHSLPQYASRT-------TLR 71
             L+A  +VIG+  +       T     I + +     D    P    R         L 
Sbjct: 78  ISLIALTVVIGLFLLYKGSFTFTAFQHSIGEFLFSPDWDPQDSPDLTLRGSVGALIFILG 137

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
            L    + L+    +A  AA        R    +  P +++   IP + +    LT  V 
Sbjct: 138 SLMTCFLGLVIATPFAVGAAVFITEIAPRAGEHLFRPAVELFLGIPSVVYGWVGLTVLVP 197

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  + +   + G  + A   +    ++  +T     ++  +P D  E +     + WQ  
Sbjct: 198 FIRDYFHASLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPYDYREAAYGLGSTRWQSI 257

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSYIA 230
            ++ +P +  G++  +++ ++  +   +A  M++     +P+            I + + 
Sbjct: 258 CHIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPVDILSPTSSLTTAITADMG 317

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +  + L+AM  +L +I ++   +
Sbjct: 318 NTTNGGEHNSALWAMALLLFLISMFFIFV 346



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 75/226 (33%), Gaps = 24/226 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLA 426
              T +  +  +     ++    + ++IA+   +   ++I            +P  +L  
Sbjct: 121 PDLTLRGSVGALIFILGSLMTCFLGLVIATPFAVGAAVFITEIAPRAGEHLFRPAVELFL 180

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
             P+ V+         P +           ++  + +++    +  +  V     +A P 
Sbjct: 181 GIPSVVYGWVGLTVLVPFIRDYFHASLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPY 240

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-- 535
           D++E A     T W+   +I+LP      +TG I     A+  ++   +       L   
Sbjct: 241 DYREAAYGLGSTRWQSICHIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPVD 300

Query: 536 --------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   TT + A +  +T  G     +     M   +  ++ F 
Sbjct: 301 ILSPTSSLTTAITADMGNTTNGGEHNSALWA---MALLLFLISMFF 343


>gi|293374110|ref|ZP_06620445.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325843770|ref|ZP_08168012.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|292647276|gb|EFF65251.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325489266|gb|EGC91644.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 244

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 81/192 (42%), Gaps = 14/192 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T +R L   V  L+ + V   LA   + +  +L P + ++++IP +  +   +++F    
Sbjct: 55  TVVRTLVTFVCILVLSLVVGILAGYYKVVAALLNPAMILLRTIPTVSLILILLIWFGRDL 114

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +I      IF I    V         S+  +  DL++V   F  + ++KF+ L  P 
Sbjct: 115 GPTIIVG--LVIFPIIYELV-------VGSIKKVDSDLKDVCLLFGCTIFEKFFALYYPN 165

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +  L   +  ++   +  +V +E++          GIG  +       ++  +    + 
Sbjct: 166 LIYALSSGVQATLGLAFKVMVMAEVMA-----QSRIGIGQALNYEKTYLNMAGVFGWTII 220

Query: 248 MLGVIFLYDQLL 259
           ++ ++ ++D L+
Sbjct: 221 LILIVMIFDFLI 232



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 78/196 (39%), Gaps = 12/196 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            I +  +T+ R +V  +   ++ + VGI  G+   +++ + P   LL   P      +++
Sbjct: 48  FIEIISVTVVRTLVTFVCILVLSLVVGILAGYYKVVAALLNPAMILLRTIPTVSLILILL 107

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYI 497
                  L P + + L++     + I++ ++ G      +D K+V   F  T +  +  +
Sbjct: 108 IWFGR-DLGPTIIVGLVI-----FPIIYELVVGSIKKVDSDLKDVCLLFGCTIFEKFFAL 161

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
             P +     +G     G A+   +++EV +         G+G  +       +   V  
Sbjct: 162 YYPNLIYALSSGVQATLGLAFKVMVMAEVMA-----QSRIGIGQALNYEKTYLNMAGVFG 216

Query: 558 GVLIMCCFVLALNRFL 573
             +I+   V+  +  +
Sbjct: 217 WTIILILIVMIFDFLI 232


>gi|255027405|ref|ZP_05299391.1| hypothetical protein LmonocytFSL_15563 [Listeria monocytogenes FSL
           J2-003]
          Length = 138

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             ++ I++L          + +RL   ++ +  I Q+IP L  L   +            
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGI----- 81

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              + AI A+    +  +  + Y  +  +   L E SR+  ++ W++ + + +P +MP +
Sbjct: 82  ---VPAIIALVIYALLPILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V + IA +I +P+GI++     ++  I   A +    P+     L++  V    +   +
Sbjct: 27  FVSLFIAVLIALPLGIYLTRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGIVPAII 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            L +  +      IL N   G         E + +  +  W+    + LP   P  
Sbjct: 87  ALVIYALL----PILRNTYTGIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVI 138


>gi|111022964|ref|YP_705936.1| ABC amino acid transport system, permease protein [Rhodococcus
           jostii RHA1]
 gi|110822494|gb|ABG97778.1| ABC amino acid transport system, permease protein [Rhodococcus
           jostii RHA1]
          Length = 230

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 78/211 (36%), Gaps = 11/211 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  YIV+   +     +       ++   + + +++++ +P+G+ IG        +    
Sbjct: 7   AWEYIVDPGNWSGSTGIGARILEHLWYSFLAVALSAVVAVPIGLIIGHLRKGDVVVVGLV 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P       +V  +    + P L L +L I      +L    AG +       + 
Sbjct: 67  NALRSLPTLGLLTFLVLLLGLGLIPPILALVILGI----PPVLAGTYAGVANVDRTVVDA 122

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T W+    +  P   P  + G   A       + V+   + G       GLG Y
Sbjct: 123 ARAMGMTEWQVLTRVEAPNALPLMLGGLRNATLQIIATATVAAYVNLG-------GLGRY 175

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +  V++G L++    L ++  L
Sbjct: 176 IFDGLALRQYDRVLVGALLVTILALVVDGLL 206



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 73/183 (39%), Gaps = 17/183 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +    R+  +V+V +++ ++S+P         +  +      +    +  I A+  
Sbjct: 47  PIGLIIGHLRKGDVVVVGLVNALRSLPT--------LGLLTFLVLLLGLGLIPPILALVI 98

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +    Y  + N+ R + + +R+  ++ WQ    +  P ++P ++  +        
Sbjct: 99  LGIPPVLAGTYAGVANVDRTVVDAARAMGMTEWQVLTRVEAPNALPLMLGGLR----NAT 154

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             ++A+  +      + L G+G YI   +  +    +L   L +  +  + D LL   + 
Sbjct: 155 LQIIATATVAA---YVNLGGLGRYIFDGLALRQYDRVLVGALLVTILALVVDGLLA--LA 209

Query: 265 VWS 267
           VW+
Sbjct: 210 VWA 212


>gi|282853469|ref|ZP_06262806.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|282582922|gb|EFB88302.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|314922212|gb|EFS86043.1| ABC transporter, permease protein [Propionibacterium acnes
           HL001PA1]
 gi|314965294|gb|EFT09393.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA2]
 gi|314982450|gb|EFT26543.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA3]
 gi|315090559|gb|EFT62535.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA4]
 gi|315094054|gb|EFT66030.1| ABC transporter, permease protein [Propionibacterium acnes
           HL060PA1]
 gi|315104435|gb|EFT76411.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA2]
 gi|327329391|gb|EGE71151.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL103PA1]
          Length = 231

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 81/211 (38%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + +A+II IP G+ IG      +     +
Sbjct: 7   ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTVAAIIAIPAGLAIGHTGRGKTIAVACS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 67  GALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGIDAIDDEVADG 126

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 127 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 179

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 180 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 210



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 69/224 (30%), Gaps = 17/224 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ ++ +           + R   
Sbjct: 1   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTVAAIIAIPAGLAIGHTGRGKT 60

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMY 155
           + V     ++++        ++     L     IG E   +     +    +  +    Y
Sbjct: 61  IAVACSGALRAL-------PSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSY 113

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +
Sbjct: 114 SGIDAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGM 173

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G       G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 174 G-------GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 210


>gi|134096697|ref|YP_001102358.1| quaternary amine ABC transporter permease [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291008889|ref|ZP_06566862.1| quaternary amine ABC transporter permease [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133909320|emb|CAL99432.1| probable ABC quaternary amine transporter,permease component
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 255

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 87/229 (37%), Gaps = 15/229 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +  ++  +      +D+ ++   +++  ++     +  L  L+  VI ++       L +
Sbjct: 26  VLAIVGSVLGWAFSQDLDEVTARSINATNIVSLTWQHFLLSLAVAVIVVVVAVPMGVLLS 85

Query: 92  KS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           +   RR+  V++ I ++ Q+ P +G L   V++F+             A+  I    +  
Sbjct: 86  RPWARRVSPVVIGIANVGQAAPSVGLL---VLFFLATKGST---GFWIAVLPIAVYALLP 139

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    L  + R L +  R   +S  +    + +P S+P ++  +  ++         
Sbjct: 140 VLRNTMVGLQQVDRSLVDAGRGIGMSAVKVLLRIELPLSVPYILAGLRTALVLAVGTATL 199

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +  +  G       G+G  I    K  +   +    +  + +  L D L
Sbjct: 200 ALFVGAG-------GLGELIDTGYKLNNWTVMCVGSVLAMALALLVDWL 241



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANV-FFPLVVSCVSYYHLNPNLWLSLL-MIFGT 460
           P+G+        + ++ P    +A          L+V        +   W+++L +    
Sbjct: 79  PMGVL--LSRPWARRVSPVVIGIANVGQAAPSVGLLVLFFLATKGSTGFWIAVLPIAVYA 136

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +L N + G         +      ++  +    I LP   PY + G  TA   A   
Sbjct: 137 LLPVLRNTMVGLQQVDRSLVDAGRGIGMSAVKVLLRIELPLSVPYILAGLRTALVLAVGT 196

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + ++     G       GLG  I    +  ++  + +G ++     L ++
Sbjct: 197 ATLALFVGAG-------GLGELIDTGYKLNNWTVMCVGSVLAMALALLVD 239


>gi|296333343|ref|ZP_06875796.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|296149541|gb|EFG90437.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
          Length = 309

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  ++S L         A             VL P+++++  IP + +    LT  V +
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                      + LA    +    +  +T     ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSIMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    V+P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + I++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSIMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAY 542
           +++P  FP  +T  +     A+  ++  ++                     + T  +G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESLFDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L++    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVISFLFILLIRYL 303


>gi|91790194|ref|YP_551146.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91699419|gb|ABE46248.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 591

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 128/407 (31%), Gaps = 18/407 (4%)

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +   P  ++ +ELA + A+    +  M F++   L  I   +   + +   S  + +  +
Sbjct: 138 LTSEPLSLLFSELAVVLALVQCSIPMMVFALVTVLRRIDGRILLAAHTLGASPLRIWSGV 197

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++ G+   + +         +A   +      +    + S I +        A+  
Sbjct: 198 LIPLAIRGIQSGVTIIFLFTMASFIAPTFLGSQRQQMLAQVVQSEIDIGADWALAAALGI 257

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
            +  +  +I      + R +  W     L  T      +     L R+            
Sbjct: 258 TLALIATIIVTALAAVARYLSRWQRPGLLPLTMPQEHVEQVDKSLLRR------------ 305

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
               P+     +L    G          + L        +  +    V    A  + +  
Sbjct: 306 ----PVKLLPSRLHIPAGFRGGARFVEPVYLLFISAYILLPLVVLIPVSFSSAEVLIFPP 361

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW-IGFRPHISSKIQPFA 422
            GY +  F             +T  R+   + +A+++   + +  IG         +   
Sbjct: 362 PGYSLRWFETIFHSQEWIAAALTSLRIGAAVCVATLVIATLTVLGIGRHFRYQGAAEALL 421

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKE 481
                 P+ VF        S   L       ++      + I++ V +   S+       
Sbjct: 422 MSPLTVPSVVFALGAYLAFSRVGLVDTETGIIIAHTVLIFPIVYQVASATFSSIDPWLSL 481

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            A+S     WR +R I+ P + P    GA+ A   +++ S+ S   S
Sbjct: 482 AAASLGANPWRIFRTIVFPLLLPGLAIGALLAMLLSFDESVSSIFLS 528


>gi|241205987|ref|YP_002977083.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859877|gb|ACS57544.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 375

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 65/180 (36%), Gaps = 9/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++  I   +    V +       +   + P   +++A P     P++V    +   +  
Sbjct: 184 VLIGYIAGCLSGFVVAVLADRIAFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSK- 242

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N +AG +A  +  +++  ++    W+    + LP   P+    
Sbjct: 243 ---AAVVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASGYWQTLLKLRLPAAMPFIFNA 299

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E      +     G+G  I+    + +   V   + +        
Sbjct: 300 LKINSTLALIGAIVAEFFGTPIV-----GMGFRISTEIGRMNVDMVWAEIAVAALAGSIF 354



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 91/240 (37%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           + + P IF     +L   +             P  I      +L +  L     +T  + 
Sbjct: 126 QLLIPAIFGAWILILWEAVTRGAGVPFILLPPPSAIGARFMASLPI--LGADVRQTIFKA 183

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L   +   L  FV A LA +   L   L+PI +++ ++PI+G     V++F   +P K 
Sbjct: 184 VLIGYIAGCLSGFVVAVLADRIAFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSKA 243

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++    WQ    L +P +MP 
Sbjct: 244 A--------VVIIMTFFPMLVNTVAGLAASGSMERDLMRTYASGYWQTLLKLRLPAAMPF 295

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +   + ++ +      + +E         P+ G+G  I+  I   ++  +++A + +  +
Sbjct: 296 IFNALKINSTLALIGAIVAEFFGT-----PIVGMGFRISTEIGRMNVD-MVWAEIAVAAL 349


>gi|170782151|ref|YP_001710484.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169156720|emb|CAQ01880.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 232

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 77/181 (42%), Gaps = 12/181 (6%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +++ L+ +     LA + RR    L+ +   + +IP        ++  M    G  I   
Sbjct: 26  VLLGLVISLPLGWLANRYRRTRGALLTVGGALYTIPS-----IALLLAMPAIIGTNILDP 80

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              + A+    V  M      +L ++  D+++ + +   +GW +FW + +P + P L+  
Sbjct: 81  RNVVVALTVYAVALMIRITSDALASVSEDVKQSATAMGYAGWARFWRVELPLAGPVLLAG 140

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +         V++  +V   ++  +  +G+ I    + Q    I+  ++ ++ +  ++
Sbjct: 141 LRV-------VSVSTVSMVTVGSLSGILSLGTMILSGYRRQFYTEIITGIVGIVVIALVF 193

Query: 256 D 256
           D
Sbjct: 194 D 194



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 8/198 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  V+ L    +      +++  +I +P+G            +      L   P+  
Sbjct: 5   LANIGTVLDLAVAHVALAAPPVLLGLVISLPLGWLANRYRRTRGALLTVGGALYTIPSIA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
               + + +    L+P   +  L ++     I        ++   D K+ A++    GW 
Sbjct: 65  LLLAMPAIIGTNILDPRNVVVALTVYAVALMIRI-TSDALASVSEDVKQSATAMGYAGWA 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P  + G         +   V  ++           LG  I     +  +
Sbjct: 124 RFWRVELPLAGPVLLAGLRVVSVSTVSMVTVGSLSGILS-------LGTMILSGYRRQFY 176

Query: 553 PEVVLGVLIMCCFVLALN 570
            E++ G++ +    L  +
Sbjct: 177 TEIITGIVGIVVIALVFD 194


>gi|325964940|ref|YP_004242846.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471027|gb|ADX74712.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 294

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 79/218 (36%), Gaps = 9/218 (4%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIM 107
           ++ +   L    +      +    +  +V+SL+         A+    G       L   
Sbjct: 78  LETMETFLQSTGILGGLINSVQVGIFTLVLSLIIGVPAGYAVARFAFPGRDPYQLFLLFT 137

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +++PI+         F+       + A +    A+       +T S++     +PRD+EE
Sbjct: 138 RALPIVVLSVPLAQLFLQTGLYDSVLAVVLLHTALALPTTILITSSVFLG---VPRDVEE 194

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R F  S  Q F  + +P ++PG+    + +    W  V+ + ++ +    +P      
Sbjct: 195 AARIFGCSPLQAFLKVVMPMAIPGIAAASIFTFVMSWNEVLGASILTLNQRTLPAQ---- 250

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            +  ++ E  L         ++    ++   + R +  
Sbjct: 251 -VLSSLAESPLAYRFAGGFLLVIPALIFIFFMRRYLTN 287



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 2/167 (1%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFPA 430
           T+     ++     ++   +  ++++ II +P G  +           Q F     A P 
Sbjct: 83  TFLQSTGILGGLINSVQVGIFTLVLSLIIGVPAGYAVARFAFPGRDPYQLFLLFTRALPI 142

Query: 431 NVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
            V   PL    +     +  L + LL         +    +     P D +E A  F  +
Sbjct: 143 VVLSVPLAQLFLQTGLYDSVLAVVLLHTALALPTTILITSSVFLGVPRDVEEAARIFGCS 202

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
             + +  +++P   P     +I     +WN  + + + +     L  
Sbjct: 203 PLQAFLKVVMPMAIPGIAAASIFTFVMSWNEVLGASILTLNQRTLPA 249


>gi|294084773|ref|YP_003551531.1| phosphate ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664346|gb|ADE39447.1| phosphate ABC transporter permease protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 434

 Score = 63.0 bits (152), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATL-------AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  + + L+ +F             AK  R+   +   ++ + ++P + F    +  F+ 
Sbjct: 220 LMTLAVCLVLSFPIGVATAVYLEEIAKKNRITEFIEININNLAAVPSVVFGILGLAIFIG 279

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++ G      L     +    +  +  S   ++  +P  + + +     S  Q  ++  +
Sbjct: 280 IF-GLPRSIPLIGGVVLALMTLPTIIISSRAAIRAVPPSVRDAAYGVGASRMQTIFHHVI 338

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++PG++   ++ M+  
Sbjct: 339 PLALPGMLTGTIIGMAQA 356



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 27/206 (13%)

Query: 391 VVLIIIASIIWIPVGIW-------IGFRPHISSKIQPFAQLLAAFPANVFFPL-VVSCVS 442
           ++ + +  ++  P+G+        I  +  I+  I+     LAA P+ VF  L +   + 
Sbjct: 220 LMTLAVCLVLSFPIGVATAVYLEEIAKKNRITEFIEININNLAAVPSVVFGILGLAIFIG 279

Query: 443 YYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            + L  ++ L   +++   T   I+ +  A   A P   ++ A     +  +   + ++P
Sbjct: 280 IFGLPRSIPLIGGVVLALMTLPTIIISSRAAIRAVPPSVRDAAYGVGASRMQTIFHHVIP 339

Query: 501 GIFPYYVTGAITACG--------------GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              P  +TG I                   A+   I + V   G +           A+ 
Sbjct: 340 LALPGMLTGTIIGMAQALGETAPLLMIGMVAFIVDIPNSVMDPGTVLPVQI---FMWADF 396

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            E+    +    ++++  F++ +N F
Sbjct: 397 AERMFIQKTSAAIIVLLAFLVGMNAF 422


>gi|226365470|ref|YP_002783253.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226243960|dbj|BAH54308.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 233

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 77/211 (36%), Gaps = 11/211 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  YI +   +     +       ++   + + +++++ +P+G+ IG        +    
Sbjct: 7   AWEYIADPGNWSGSTGIGARILEHLWYSFLAVALSAVVAVPIGLIIGHLRKGDVVVVGLV 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L + P       +V  +    + P L L +L I      +L    AG +       + 
Sbjct: 67  NALRSLPTLGLLTFLVLLLGLGLIPPILALVILGIP----PVLAGTYAGVANVDRTVVDA 122

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T W+    +  P   P  + G   A       + V+   + G       GLG Y
Sbjct: 123 ARAMGMTEWQVLTRVETPNALPLMLGGLRNATLQIIATATVAAYVNLG-------GLGRY 175

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +  V++G L++    L ++  L
Sbjct: 176 IFDGLALRQYDRVLVGALLVTILALVVDGLL 206



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 73/183 (39%), Gaps = 17/183 (9%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +    R+  +V+V +++ ++S+P         +  +      +    +  I A+  
Sbjct: 47  PIGLIIGHLRKGDVVVVGLVNALRSLPT--------LGLLTFLVLLLGLGLIPPILALVI 98

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +    Y  + N+ R + + +R+  ++ WQ    +  P ++P ++  +        
Sbjct: 99  LGIPPVLAGTYAGVANVDRTVVDAARAMGMTEWQVLTRVETPNALPLMLGGLR----NAT 154

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             ++A+  +      + L G+G YI   +  +    +L   L +  +  + D LL   + 
Sbjct: 155 LQIIATATVAA---YVNLGGLGRYIFDGLALRQYDRVLVGALLVTILALVVDGLLA--LA 209

Query: 265 VWS 267
           VW+
Sbjct: 210 VWA 212


>gi|317406389|gb|EFV86611.1| hypothetical protein HMPREF0005_05669 [Achromobacter xylosoxidans
           C54]
          Length = 103

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                +  + +R+++LP   P   T    + G  W A I +E+ +        TGLG  +
Sbjct: 5   RCVGASRAQVFRHVVLPHTLPELFTSVRLSLGIGWTALIAAELVA------ANTGLGWMV 58

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
             +        V+LG++++      L+  L      + 
Sbjct: 59  LNAGNYLRTDVVILGIVLLGLIGYLLDVLLLAAQKRFA 96



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R    S  Q F ++ +P ++P L  ++ +S+  GW  ++A+E++          G+G  +
Sbjct: 5   RCVGASRAQVFRHVVLPHTLPELFTSVRLSLGIGWTALIAAELVAANT------GLGWMV 58

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
             A        ++  ++ +  + +L D LL    +    W+ K
Sbjct: 59  LNAGNYLRTDVVILGIVLLGLIGYLLDVLLLAAQKRFAPWTGK 101


>gi|51893109|ref|YP_075800.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51856798|dbj|BAD40956.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 249

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 11/186 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+   +    I   + + V I + + P +++ + P+  +L A P     P+    + +
Sbjct: 54  GVTLRETLAGFAIGMALGLGVAIALWWWPALAAVLDPYLVVLNALPKIALGPIFYIWLGH 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 + +++ ++       +  + AG S    +   V  +F  T  +  R +++P   
Sbjct: 114 TLSVYGMAVAISVVV-----TIVMLHAGFSEVEANQVLVMRTFGATRGQILRKVVIPSSL 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  +       G      IV E  S         GLG  I    +      V+  V+I+ 
Sbjct: 169 PTVMAALKVNIGLTLVGVIVGEFLS------ARAGLGYLIIYGGQVFQMQLVMTSVVILA 222

Query: 564 CFVLAL 569
                L
Sbjct: 223 VISALL 228



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 73/214 (34%), Gaps = 15/214 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
           T+ P  I   +       SL  +   T    L+   I +      A        L  VL 
Sbjct: 30  TSRPSQIWRTLVSMASSGSLWMHLGVTLRETLAGFAIGMALGLGVAIALWWWPALAAVLD 89

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P L ++ ++P +       ++  +      +   ++ +  I           ++     +
Sbjct: 90  PYLVVLNALPKIALGPIFYIWLGHTLSVYGMAVAISVVVTIVM---------LHAGFSEV 140

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
             +   V R+F  +  Q    + +P S+P ++  + +++      V+  E +        
Sbjct: 141 EANQVLVMRTFGATRGQILRKVVIPSSLPTVMAALKVNIGLTLVGVIVGEFLS------A 194

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
             G+G  I    +   +  ++ +++ +  +  L 
Sbjct: 195 RAGLGYLIIYGGQVFQMQLVMTSVVILAVISALL 228


>gi|120556532|ref|YP_960883.1| phosphate ABC transporter, inner membrane subunit PstA
           [Marinobacter aquaeolei VT8]
 gi|120326381|gb|ABM20696.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Marinobacter aquaeolei VT8]
          Length = 424

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 56/150 (37%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
               +      + L M+  + +S       A      A   +L   +   ++ + ++P +
Sbjct: 198 SRAGILGAIVGSLLTMVVTLALSFPIGVAAAIYLEEFAPQNKLTDFIEVNINNLAAVPSI 257

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+NL+ G      +     +    +  +  S   ++ ++P  + E +    
Sbjct: 258 IFGLLGLAVFINLF-GMPRSVPVVGGLVLTLMTLPTIIISSRAAIKSVPPSIREAAEGIG 316

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q   +  +P +MPG++   ++ M+  
Sbjct: 317 ASKMQVVLHHVLPLAMPGMLTGSIIGMAQA 346



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 58/145 (40%), Gaps = 6/145 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFP 435
           ++     ++  +VV + ++  I +   I++     +  ++  I+     LAA P+ +F  
Sbjct: 202 ILGAIVGSLLTMVVTLALSFPIGVAAAIYLEEFAPQNKLTDFIEVNINNLAAVPSIIFGL 261

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++        P    +   L++   T   I+ +  A   + P   +E A     +  +
Sbjct: 262 LGLAVFINLFGMPRSVPVVGGLVLTLMTLPTIIISSRAAIKSVPPSIREAAEGIGASKMQ 321

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG+I     A
Sbjct: 322 VVLHHVLPLAMPGMLTGSIIGMAQA 346


>gi|321311982|ref|YP_004204269.1| phosphate ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018256|gb|ADV93242.1| phosphate ABC transporter permease [Bacillus subtilis BSn5]
          Length = 309

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-F 123
            +  ++S L         A             VL P+++++  IP +  GF+  TV+  F
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  +     G  L A   + +  +     S+   ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    V+P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + I++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAY 542
           +++P  FP  +T  +     A+  ++  ++                     + T  +G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESLFDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L+M    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|291484944|dbj|BAI86019.1| phosphate ABC transporter, permease [Bacillus subtilis subsp. natto
           BEST195]
          Length = 309

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-F 123
            +  ++S L         A             VL P+++++  IP +  GF+  TV+  F
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  +     G  L A   + +  +     S+   ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    V+P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + I++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTILSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    S    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAY 542
           +++P  FP  +T  +     A+  ++  ++                     + T  +G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESLFDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L+M    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|290508583|ref|ZP_06547954.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
 gi|289777977|gb|EFD85974.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
          Length = 266

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 18/259 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                + + +   + L   +  ++ G+       S  +               L     +
Sbjct: 17  ARRRAMKALREPLWWLIALFIGLLVGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGW 76

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYY 444
            VV   + A+ + +  GI +       S  +P  + +AA     P      + V  + + 
Sbjct: 77  LVVASSLAATAVGLAAGIAV--TRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFG 134

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
            L   + L+L  I      +L   +AG  + P+    VA    ++GW+    + LP   P
Sbjct: 135 WLPALIALALYGIL----PVLQGTLAGLGSIPSGVSGVAEGMGMSGWQRLYKVELPLAAP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             + G  T+       + ++         +  + LG  I       +   +V G L++  
Sbjct: 191 VILAGIRTSVIVNIGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVAL 243

Query: 565 FVLALNRFLWHPLYLYGTR 583
             + ++R     L  + +R
Sbjct: 244 AAIIVDRAF-ERLTRWISR 261



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 74/206 (35%), Gaps = 22/206 (10%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMN 125
             ++++ + +           A +R  G    P+++    I Q+ P +  L   V     
Sbjct: 76  WLVVASSLAATAVGLAAGI--AVTRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLG- 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L A+ A+    +  +       L +IP  +  V+    +SGWQ+ + + +
Sbjct: 133 -------FGWLPALIALALYGILPVLQGTLAGLGSIPSGVSGVAEGMGMSGWQRLYKVEL 185

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  +  S+         +  +           +G+ I + +   +   I+   
Sbjct: 186 PLAAPVILAGIRTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGA 238

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFR 271
           L +     + D+  F  +  W ++ R
Sbjct: 239 LLVALAAIIVDRA-FERLTRWISRHR 263


>gi|50841887|ref|YP_055114.1| ABC transporter-associated permease [Propionibacterium acnes
           KPA171202]
 gi|289424275|ref|ZP_06426058.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289426647|ref|ZP_06428376.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|295129960|ref|YP_003580623.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|50839489|gb|AAT82156.1| ABC transporter-associated permease [Propionibacterium acnes
           KPA171202]
 gi|289154972|gb|EFD03654.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289160142|gb|EFD08317.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|291376098|gb|ADD99952.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|332674802|gb|AEE71618.1| ABC transporter-associated permease [Propionibacterium acnes 266]
          Length = 231

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 80/211 (37%), Gaps = 7/211 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++     +     +       ++  ++ + IA+I  IP G+ IG      +     +
Sbjct: 7   ALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKTIAVACS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P+     L+    +    NP +  ++++       +L    +G  A  ++  + 
Sbjct: 67  GALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGVDAIDDEVADG 126

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + LP   P  + G  +A       + +      G       GLG +
Sbjct: 127 ARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMG-------GLGRF 179

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I +      +P+++ G +++    L ++  L
Sbjct: 180 ILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 210



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 68/224 (30%), Gaps = 17/224 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +         +          S+           L A+ I+ +           + R   
Sbjct: 1   MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTIAAITAIPAGLAIGHTGRGKT 60

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMY 155
           + V     +++         ++     L     IG E   +     +    +  +    Y
Sbjct: 61  IAVACSGALRA-------LPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSY 113

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             +  I  ++ + +R+  ++  Q    + +P + P L+  +  +             + +
Sbjct: 114 SGVDAIDDEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGM 173

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G       G+G +I   +   D   +L   + ++ +  + D LL
Sbjct: 174 G-------GLGRFILDGLAVSDYPQMLAGSIVIIVLALVVDGLL 210


>gi|118588311|ref|ZP_01545720.1| ABC transporter, membrane spanning protein [Stappia aggregata IAM
           12614]
 gi|118439017|gb|EAV45649.1| ABC transporter, membrane spanning protein [Stappia aggregata IAM
           12614]
          Length = 251

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 90/253 (35%), Gaps = 18/253 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++F L+  V +   I  +    Q   +P     +         L  +A  T    +   V
Sbjct: 11  SVFGLILTVAIWAAIVHI-FDTQHYILPGPDRVLAAFAKHAGFLLHHAGITAYETVLGFV 69

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +      + + L         + +P + + Q++P+       V++       K++   L 
Sbjct: 70  LGAAAGALLSVLLWLFPVAARLAMPPILVTQALPVFAIAPILVLWLGFGLASKIVVVILV 129

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             F + ++         +  L  +   L +++R +RLS  ++ W+  +P  +P     + 
Sbjct: 130 IFFTVTST--------FFDGLQRLDPGLHDLARLYRLSRLKELWFFRLPSGLPAFASGLR 181

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++       V A    ++G+      G+   +  +        +  A++ +  ++ +   
Sbjct: 182 VA------AVFAPMGAIIGEWAGAKGGLAFIMLQSSNRMQADMMFAALILLAAMVLIMRF 235

Query: 258 L---LFRPMIVWS 267
               L R ++ W 
Sbjct: 236 AVNHLTRLLVPWQ 248



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 10/193 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +++    IT +  V+  ++ +     + + +   P  +    P   +  A P     P+
Sbjct: 51  GFLLHHAGITAYETVLGFVLGAAAGALLSVLLWLFPVAARLAMPPILVTQALPVFAIAPI 110

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  +  + L   + + +L+IF T     F    G         ++A  + ++  +   +
Sbjct: 111 LVLWLG-FGLASKIVVVILVIFFTVTSTFF---DGLQRLDPGLHDLARLYRLSRLKELWF 166

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             LP   P + +G   A   A   +I+ E A          GL   + +S+ +     + 
Sbjct: 167 FRLPSGLPAFASGLRVAAVFAPMGAIIGEWAG------AKGGLAFIMLQSSNRMQADMMF 220

Query: 557 LGVLIMCCFVLAL 569
             ++++   VL +
Sbjct: 221 AALILLAAMVLIM 233


>gi|317497373|ref|ZP_07955696.1| sulfonate/nitrate/taurine transport system permease
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895442|gb|EFV17601.1| sulfonate/nitrate/taurine transport system permease
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 169

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I     +M R++   ++A I  IP+G+  G+   I + ++P  +     P   ++ L+V
Sbjct: 72  LIQHLAASMGRLIKAYVLAMITAIPLGLLSGYNSKIRALLEPVIEFYRPLPPLAYYTLLV 131

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             +     +      +L+       I     AG +  
Sbjct: 132 LWMGIGDGSK----IMLLFLAGFAPIYIACAAGVNKV 164



 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 43/89 (48%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L Q+ + +  R++ A V++++       L+  + ++  +L P+++  + +P L + T 
Sbjct: 70  STLIQHLAASMGRLIKAYVLAMITAIPLGLLSGYNSKIRALLEPVIEFYRPLPPLAYYTL 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            V++       K++   LA    I+ +  
Sbjct: 130 LVLWMGIGDGSKIMLLFLAGFAPIYIACA 158


>gi|317133283|ref|YP_004092597.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
 gi|315471262|gb|ADU27866.1| binding-protein-dependent transport systems inner membrane
           component [Ethanoligenens harbinense YUAN-3]
          Length = 216

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++           L +++ ++L       L  +  +   V +    ++Q+IP L   
Sbjct: 10  NWAAVLHALLIHVQMSLLSILFAVLIAVPIGILLTRHEKAAKVALAGAGVIQTIPGLV-- 67

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                  + +         L ++  +    +  +  + +  +  +     E ++   ++ 
Sbjct: 68  ------MLGIGLLLFGLGMLPSVIVLVAYAILPIMQNTFTGIKEVDGLYTEAAKGIGMTD 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q    +  P ++P +V  + +S+     +   + +I  G       G+G  I   +   
Sbjct: 122 FQILLKVEFPIAIPAIVAGIRLSLVYIISWATLAALIGAG-------GLGDLIWTGLSCY 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           D   IL   +    +  +   L+
Sbjct: 175 DTNMILAGAIPASLLAIVSGLLI 197



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 64/195 (32%), Gaps = 11/195 (5%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           ++   V+    I +   ++ I+ A +I +P+GI +      +      A ++   P    
Sbjct: 9   ENWAAVLHALLIHVQMSLLSILFAVLIAVPIGILLTRHEKAAKVALAGAGVIQTIPGL-- 66

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             +++           L   ++++      I+ N   G       + E A    +T ++ 
Sbjct: 67  --VMLGIGLLLFGLGMLPSVIVLVAYAILPIMQNTFTGIKEVDGLYTEAAKGIGMTDFQI 124

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +  P   P  V G   +     + + ++ +   G       GLG  I          
Sbjct: 125 LLKVEFPIAIPAIVAGIRLSLVYIISWATLAALIGAG-------GLGDLIWTGLSCYDTN 177

Query: 554 EVVLGVLIMCCFVLA 568
            ++ G +      + 
Sbjct: 178 MILAGAIPASLLAIV 192


>gi|326203776|ref|ZP_08193639.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
 gi|325986216|gb|EGD47049.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium papyrosolvens DSM 2782]
          Length = 221

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDI 106
           +     + +    T    L + + + +       L   S         +L  +L  I+++
Sbjct: 4   SSTWMMIGKGLLETVYMTLLSTLAAYVIGLPLGVLLVTSENNGILPKPKLNKILNVIVNL 63

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP L  L   V+       G  IG+    +  +  +  + +   +  SL  + + + 
Sbjct: 64  LRSIPFLILL-IAVMPVTRALIGTTIGSTATVVPLVIAAAPF-IARLVESSLQEVDKGVI 121

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           E + S   S +Q    + +P S+P L+    ++
Sbjct: 122 EAAVSMGCSPFQIIRKVMLPESVPSLITGAAIA 154



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAA 427
            + +      T++  ++  + A +I +P+G+ +           P ++  +     LL +
Sbjct: 7   WMMIGKGLLETVYMTLLSTLAAYVIGLPLGVLLVTSENNGILPKPKLNKILNVIVNLLRS 66

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVAS 484
            P  +   + V  V+   +   +  +  ++        +I   V +          E A 
Sbjct: 67  IPFLILL-IAVMPVTRALIGTTIGSTATVVPLVIAAAPFIARLVESSLQEVDKGVIEAAV 125

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   + ++  R ++LP   P  +TGA  A       S ++ +   G +       G Y  
Sbjct: 126 SMGCSPFQIIRKVMLPESVPSLITGAAIATTTILGYSAMAGIVGGGGLGDIAIRYGLY-- 183

Query: 545 ESTEKGSFPEVVLGVLIMCC 564
                  F  V L V+++  
Sbjct: 184 RYQNDMMFVTVALLVIVVQI 203


>gi|258514381|ref|YP_003190603.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257778086|gb|ACV61980.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 284

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 70/173 (40%), Gaps = 7/173 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF-- 115
            L      +    L A+++ +  +   A   A+         + P+++++  IP + +  
Sbjct: 61  GLLSMILGSFYVTLGALLLGVPISIGCAIYMAEIAPNWFSKAVRPLIELLAGIPSVVYGF 120

Query: 116 --LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V   MN   G+ +   LAA F +    +  +      ++  +PR+  E S +  
Sbjct: 121 YGLVVIVPLIMNYLGGRGLSM-LAASFVLGMMILPTVINVSEDAIRAVPREYREGSCALG 179

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
              WQ  + + +P + PG++  +++ M       +A  ++    T IP   +G
Sbjct: 180 AGLWQTIYKVVLPTARPGIIAAVVLGMGRAVGETMAVILVAGNATAIPGSPLG 232



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 67/175 (38%), Gaps = 13/175 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF- 433
             ++ +   + +  +  +++   I I   I++        S  ++P  +LLA  P+ V+ 
Sbjct: 60  FGLLSMILGSFYVTLGALLLGVPISIGCAIYMAEIAPNWFSKAVRPLIELLAGIPSVVYG 119

Query: 434 -------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASS 485
                   PL+++ +    L+      +L +       + NV      A P +++E + +
Sbjct: 120 FYGLVVIVPLIMNYLGGRGLSMLAASFVLGMM--ILPTVINVSEDAIRAVPREYREGSCA 177

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
                W+    ++LP   P  +   +   G A   ++   + +     +  + LG
Sbjct: 178 LGAGLWQTIYKVVLPTARPGIIAAVVLGMGRAVGETMAVILVAGNATAIPGSPLG 232


>gi|298346499|ref|YP_003719186.1| phosphate ABC transporter permease [Mobiluncus curtisii ATCC 43063]
 gi|298236560|gb|ADI67692.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Mobiluncus curtisii ATCC 43063]
          Length = 356

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 70/181 (38%), Gaps = 7/181 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMVISLL 81
            F  + G   +L+  +    V R ++   P+  +     +      T   +  ++++S+ 
Sbjct: 32  VFGAIGGFFLMLIVALAAYIVFRGLLSFDPVFLSFSRDGIMNQVFNTVYLVFLSLIVSVA 91

Query: 82  FTFVYATLAAKSRRLGM---VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+          +   ++ + S+P +    F  + F+ +   +     LA 
Sbjct: 92  LGVPAGIYMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNL--LAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A+    +  +T S   +L  +P DL+  S +   + W     + +P ++P L+  +++
Sbjct: 150 ALAVSILNLPLVTTSTESALRALPADLKYGSAALGATRWTTIVRVQLPAALPHLMTGVVL 209

Query: 199 S 199
           +
Sbjct: 210 A 210



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 69/173 (39%), Gaps = 5/173 (2%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F+  ++  +A  I ++ +      F       ++     T++ V + +I++  + +P GI
Sbjct: 39  FFLMLIVALAAYIVFRGLLSFDPVFLSFSRDGIMNQVFNTVYLVFLSLIVSVALGVPAGI 98

Query: 407 WIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           ++         +  I+   + L++ P+ V   F  +V  +        L  +L +     
Sbjct: 99  YMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNLLAGALAVSILNL 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +  +  +   A P D K  +++   T W     + LP   P+ +TG + A 
Sbjct: 159 PLVTTSTESALRALPADLKYGSAALGATRWTTIVRVQLPAALPHLMTGVVLAA 211


>gi|15964265|ref|NP_384618.1| phosphate ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307307002|ref|ZP_07586741.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sinorhizobium meliloti BL225C]
 gi|307320656|ref|ZP_07600069.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sinorhizobium meliloti AK83]
 gi|15073442|emb|CAC45084.1| Putative phosphate transport system permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306893691|gb|EFN24464.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sinorhizobium meliloti AK83]
 gi|306901942|gb|EFN32541.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sinorhizobium meliloti BL225C]
          Length = 440

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 57/142 (40%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  +V+SL      +      A   RL  ++   ++ + ++P + +    + 
Sbjct: 222 LLGSLYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLA 281

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N + G    A L   F +    +  +  +   +L  +P  +   +     S  Q  +
Sbjct: 282 VFVN-FAGMPRSAALVGAFVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQTIF 340

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P +MPG++   ++ ++  
Sbjct: 341 HHVLPLAMPGILTGTIIGLAHA 362



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + +++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALLGSLYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNPNLWL---SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P       + ++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLAVFVNFAGMPRSAALVGAFVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQT 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 IFHHVLPLAMPGILTGTIIGLAHA 362


>gi|119387012|ref|YP_918067.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377607|gb|ABL72371.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 224

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L Q   +T   +  + +I  L         A SRR  ++  P L+          +S P 
Sbjct: 9   LWQATLQTLYMVAMSTLIGTLIGGPLGVFLATSRRGELLSAPWLNTTLGLVVNAARSTP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  +    +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRLIAGTSIGTT-AAIVPLTIAAAPFIARLIETAIREVDAGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P +MPG++  + +++
Sbjct: 127 GATPGQIVRKVLIPEAMPGIILGLTLAV 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 51/169 (30%), Gaps = 15/169 (8%)

Query: 374 QDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQL 424
            +++ ++W   + T++ V +  +I ++I  P+G+++           P +++ +      
Sbjct: 3   ANLIPILWQATLQTLYMVAMSTLIGTLIGGPLGVFLATSRRGELLSAPWLNTTLGLVVNA 62

Query: 425 LAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
             + P         P                + L +        L               
Sbjct: 63  ARSTPFIILVVAIIPFTRLIAGTSIGTTAAIVPLTIAAAPFIARLIETA--IREVDAGLI 120

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           E A +   T  +  R +++P   P  + G   A       S +      
Sbjct: 121 EAARAMGATPGQIVRKVLIPEAMPGIILGLTLAVVSLIGYSAMVGAVGG 169


>gi|328956726|ref|YP_004374112.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
 gi|328673050|gb|AEB29096.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
          Length = 306

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 13/214 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L +  ++  F    A             VL P+++++  IP + +    LT  V 
Sbjct: 89  SFLVTLLSAALATPFAIGAAIFMTEISPSTGKRVLQPVVELLVGIPSVVYGFIGLTVVVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +++ G   G  L+A F +F   +  +T     +L  +PR   E S +   + WQ  +
Sbjct: 149 FVRSIFGGTGFGI-LSATFVLFVMILPTVTSMAVDALNAVPRYYREASLAMGATRWQTIY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +  +MPGL+  ++  M+  +   +A +M++    ++      P   + S + +++  
Sbjct: 208 KVVLRSAMPGLLTAVVFGMARAFGEALAVQMVIGNAALMPTSLVTPASTLTSILTMSMGN 267

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +  +   +L  L +I +   L F  +  W  K
Sbjct: 268 TVMGTLENNVLWSLALILMVMALFFNILTRWIGK 301



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 50/129 (38%), Gaps = 7/129 (5%)

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI 469
             +QP  +LL   P+ V+  + ++ V       +      +  +  ++F      + ++ 
Sbjct: 121 RVLQPVVELLVGIPSVVYGFIGLTVVVPFVRSIFGGTGFGILSATFVLFVMILPTVTSMA 180

Query: 470 A-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               +A P  ++E + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 181 VDALNAVPRYYREASLAMGATRWQTIYKVVLRSAMPGLLTAVVFGMARAFGEALAVQMVI 240

Query: 529 WGHIHLRTT 537
                + T+
Sbjct: 241 GNAALMPTS 249


>gi|254254530|ref|ZP_04947847.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia dolosa AUO158]
 gi|124899175|gb|EAY71018.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia dolosa AUO158]
          Length = 392

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   L  V++P L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGLPLGIACARIAALRTVVMPALNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPQVIEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+ + + +  ++P ++  + +
Sbjct: 302 MTRMQRLFCIDLVLALPVILSGVRI 326



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 51/148 (34%), Gaps = 13/148 (8%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + + + P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGLPLGIACARIAALRTVVMPALNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V  G +  P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVAVGLAQVPPQVIEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
            +T  +    I L    P  ++G     
Sbjct: 301 GMTRMQRLFCIDLVLALPVILSGVRIVL 328


>gi|218679836|ref|ZP_03527733.1| probable proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CIAT 894]
          Length = 257

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 9/203 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L    ++ I+++       L     RL  V++  L ++Q+IP L      ++   
Sbjct: 50  AISHLLLAFGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLG 109

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 110 YLATHVALAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 169

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV-VASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q    + +P + P ++  + + +      V +A+ +   G  +    G+G      +  
Sbjct: 170 RQILVRIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 229

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  + +A  + + +  + D +
Sbjct: 230 GAVPTVFFAFSSAVILDAVIDSI 252



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA I+ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 54  LLLAFGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLGYLAT 113

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T  +  
Sbjct: 114 HVALAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRRQIL 173

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 174 VRIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 233

Query: 554 EVVLG 558
            V   
Sbjct: 234 TVFFA 238


>gi|221640100|ref|YP_002526362.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221160881|gb|ACM01861.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Rhodobacter sphaeroides KD131]
          Length = 238

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 80/218 (36%), Gaps = 14/218 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           L G     +P     +  +  +   L +    T   +L  + + LL         A S +
Sbjct: 20  LSGAPPYILPGPAAVLRALAENRAMLARNGLTTLAEILLGLGLGLLIGLAAGLATALSTQ 79

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  +L P+L + Q++P+        ++       KV    L   F + ++        ++
Sbjct: 80  VERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSKVAVVVLITFFPVASA--------LH 131

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L   P    +++R  R   W+   +L +P ++P L   + ++       V A    V+
Sbjct: 132 DGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIA------AVYAPIGAVI 185

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
           G+ V    G+G  + LA        +  A+  +  +  
Sbjct: 186 GEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAMTL 223



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   ++P   L  A P     P++   + Y   +       +++  T + +   +
Sbjct: 75  ALSTQVERLLRPLLVLSQAVPVFALAPILTLWLGYGMGSK----VAVVVLITFFPVASAL 130

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G  A P    ++A       WR   ++ LP   P+       A   A   +++ E   
Sbjct: 131 HDGLRATPEAALDLARLARAPRWRTLVWLRLPHALPHLAAALRIAAVYAPIGAVIGEWVG 190

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  + GLG  +  +  +     +   + ++    L L
Sbjct: 191 ------SSAGLGHLMLLANARMKTDLMFAALAVLAAMTLGL 225


>gi|58336700|ref|YP_193285.1| ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227903263|ref|ZP_04021068.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254017|gb|AAV42254.1| abc transporter permease [Lactobacillus acidophilus NCFM]
 gi|227869068|gb|EEJ76489.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 331

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  ++S L    +A   A       S++    L  + +++  IP + +    LT  V  
Sbjct: 116 FAVTLLSALVATPFAIAIALYMTEYSSKKGANFLQSVTELLVGIPSVVYGFLGLTIIVPV 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             N++ G   G  LAA   +F   +  +T     +L  +P    + S +   + WQ  + 
Sbjct: 176 IRNIFGGTGFGI-LAATLVLFVMVLPTITSLTVDALKAVPGHFRKASMALGATHWQTIYR 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 65/185 (35%), Gaps = 13/185 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
              ++ +               + +     + ++++++  P  I I            ++
Sbjct: 88  VFHFLTSTDWDPGDGKNHVGAAVMIVTSFAVTLLSALVATPFAIAIALYMTEYSSKKGAN 147

Query: 417 KIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VI 469
            +Q   +LL   P+ V+      ++V  +   +      +  + L++F      + +  +
Sbjct: 148 FLQSVTELLVGIPSVVYGFLGLTIIVPVIRNIFGGTGFGILAATLVLFVMVLPTITSLTV 207

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               A P  F++ + +   T W+    ++L    P  +T  I     A+  ++  ++   
Sbjct: 208 DALKAVPGHFRKASMALGATHWQTIYRVVLRVATPRILTAVIFGMARAFGEALAVQMVIG 267

Query: 530 GHIHL 534
             + +
Sbjct: 268 NAVLM 272


>gi|50954890|ref|YP_062178.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
 gi|31616619|gb|AAP55492.1| PROZ-like protein [Leifsonia xyli subsp. xyli]
 gi|50951372|gb|AAT89073.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
          Length = 247

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 14/202 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P  A    L  L  +++S         L   + RL  V V     ++++P LG   
Sbjct: 20  PRGIPTRAGEHILYSLLTLLLSGAIALPIGFLIGHTGRLRGVAVGFSGALRALPTLGL-- 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  +      V       + AI       +    Y  L  + R   + +R+  ++ W
Sbjct: 78  VVYLALLTANISIVPPLIALTVLAIP-----PLLAGAYSGLQAVDRRTIDAARAVGMTEW 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F  + +P S+P ++  +             + ++ VG       G+G ++   +  Q+
Sbjct: 133 QIFSKVELPLSLPLVLGGIRAGALQVIATWTVAAILPVG-------GLGRFLFDGLAVQN 185

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +L   + ++ +  + D L 
Sbjct: 186 YPEMLGGSIIVVALALVVDGLF 207



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 10/211 (4%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           + G++ +         +       +   ++ ++++  I +P+G  IG    +      F+
Sbjct: 7   AFGWLFDPANTAGPRGIPTRAGEHILYSLLTLLLSGAIALPIGFLIGHTGRLRGVAVGFS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P      +V   +   +++    L  L +      +L    +G  A      + 
Sbjct: 67  GALRALPTLGL--VVYLALLTANISIVPPLIALTVL-AIPPLLAGAYSGLQAVDRRTIDA 123

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T W+ +  + LP   P  + G             V+ +   G       GLG +
Sbjct: 124 ARAVGMTEWQIFSKVELPLSLPLVLGGIRAGALQVIATWTVAAILPVG-------GLGRF 176

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           + +     ++PE++ G +I+    L ++   
Sbjct: 177 LFDGLAVQNYPEMLGGSIIVVALALVVDGLF 207


>gi|210632884|ref|ZP_03297583.1| hypothetical protein COLSTE_01490 [Collinsella stercoris DSM 13279]
 gi|210159352|gb|EEA90323.1| hypothetical protein COLSTE_01490 [Collinsella stercoris DSM 13279]
          Length = 217

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I    RP           +L   P+     + V  +    L   + L++L I      IL
Sbjct: 42  ILCSARPWAERLATGLTGVLRVIPSLAVLIICVPILGVGDLPAVIALTVLAIP----PIL 97

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N      + P    E A    ++  + +  I  P  FP   +G  TA      ++ ++ 
Sbjct: 98  INTCVAFRSVPPAIIEAARGMGMSRTQLFFSIKAPLAFPLAFSGVRTAATEVIASASLAA 157

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               G       GLG  I           + +G L +    L +NR L
Sbjct: 158 YIGAG-------GLGVLIYTGLGALRTDLLWIGGLSVAALSLIVNRAL 198



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 19/174 (10%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
            L +       +   +  +++ IP L  L   V              +L A+ A+    +
Sbjct: 42  ILCSARPWAERLATGLTGVLRVIPSLAVLIICVPILGVG--------DLPAVIALTVLAI 93

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
             +  +   +  ++P  + E +R   +S  Q F+ +  P + P     +  +        
Sbjct: 94  PPILINTCVAFRSVPPAIIEAARGMGMSRTQLFFSIKAPLAFPLAFSGVRTA-------- 145

Query: 208 VASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            A+E+I        I   G+G  I   +       +    L++  +  + ++ L
Sbjct: 146 -ATEVIASASLAAYIGAGGLGVLIYTGLGALRTDLLWIGGLSVAALSLIVNRAL 198


>gi|170761169|ref|YP_001785910.1| putative spermidine/putrescine ABC transporter, permease
           protein/spermidine/putrescine-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169408158|gb|ACA56569.1| spermidine/putrescine transport system permease protein
           PotC/spermidine/putrescine-binding periplasmic protein
           PotD [Clostridium botulinum A3 str. Loch Maree]
          Length = 613

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 5/206 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++  L   +++ I+          T     +D     ++   + +    + L    +   
Sbjct: 16  VYAFLYLPIIVLIVFSFNKSKLNATFTGFTLDWYKNLINNTQILEALKNSLLIAFISTFF 75

Query: 79  SLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           +++   + A    + +  G   +  +L I   IP +      + +F +L    +    + 
Sbjct: 76  AVIIGTLAAIGMYRYKFKGKGAMEGLLYIPVVIPEIVMGISMLAFFSSL---NLPAGIIT 132

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I A  T  +  +   +   L      LEE ++    + WQ    + +P   PG++   +
Sbjct: 133 LILAHITFCISYVIIVVRARLDGFDSALEEAAQDLGATPWQTLTKVTLPVIAPGIISGAL 192

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLP 223
           ++ +     V+ S     G     LP
Sbjct: 193 LAFTLSLDDVIIS-FFAAGPDSNTLP 217



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 80/230 (34%), Gaps = 10/230 (4%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
                V+   +   +  +  +      +   L         +   +++  I++   + +G
Sbjct: 21  YLPIIVLIVFSFNKSKLNATFTGFTLDWYKNLINNTQILEALKNSLLIAFISTFFAVIIG 80

Query: 406 IW--IGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFG 459
               IG           ++    +    P  V    +++  S  +L   +   +L  I  
Sbjct: 81  TLAAIGMYRYKFKGKGAMEGLLYIPVVIPEIVMGISMLAFFSSLNLPAGIITLILAHITF 140

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
              Y++  V A    F +  +E A     T W+    + LP I P  ++GA+ A   + +
Sbjct: 141 CISYVIIVVRARLDGFDSALEEAAQDLGATPWQTLTKVTLPVIAPGIISGALLAFTLSLD 200

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I+S  A+    +     + + +      G  PE+     +M  F L++
Sbjct: 201 DVIISFFAAGPDSNTLPLKIFSMVK----FGVTPEINALSTVMMVFTLSM 246


>gi|297200024|ref|ZP_06917421.1| permease membrane component [Streptomyces sviceus ATCC 29083]
 gi|197710497|gb|EDY54531.1| permease membrane component [Streptomyces sviceus ATCC 29083]
          Length = 215

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 63/201 (31%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ L   +   +   S   G +       + ++P L  +  
Sbjct: 12  QQLLADAYQHASVVFQCMVVATLIGVLIGVVTYHSEWAGDLATTATSTILTVPSLAMIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          + A+    +  +  +    L  +   L + +    +S   
Sbjct: 72  LIPVVGLGVPP--------TVIALTLYGLLPIVRNAIVGLRGVDPALVDAATGIGMSRVM 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   I     
Sbjct: 124 RLVRVELPLAWPPILTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGIASLGS 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L  +L     I +   L 
Sbjct: 177 KNALNQVLAGTLGIIVLALLF 197



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A++I + +G+                  +   P+     L++  V        
Sbjct: 25  VFQCMVVATLIGVLIGVVTYHSEWAGDLATTATSTILTVPSLAMIGLLIPVVGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A+   ++       + LP  +P  +TG
Sbjct: 85  IALTLYGLL----PIVRNAIVGLRGVDPALVDAATGIGMSRVMRLVRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +      +   IA    K +  +V+ G L +    L  
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSKNALNQVLAGTLGIIVLALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|313622398|gb|EFR92862.1| phosphate ABC transporter, permease protein PstC [Listeria innocua
           FSL J1-023]
          Length = 316

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|119714717|ref|YP_921682.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioides sp. JS614]
 gi|119535378|gb|ABL79995.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioides sp. JS614]
          Length = 235

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 80/201 (39%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L    ++  +  + +++  ++  F  A LA +   L   ++ +   + +IP L     
Sbjct: 34  HELVDATTQHLVITVVSVIAGVVIAFPLALLARRLPALETSVLGVTTAVYTIPSLALFPL 93

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V +        VIG  L A        +  +  SM + L ++P ++ E +        +
Sbjct: 94  LVPFTGLSATTVVIGLALYA--------LTILVRSMLEGLRSVPEEVRESAVGLGYGATR 145

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  + ++        V++  +    +++   G+G+ I   +     
Sbjct: 146 LLVLVELPLALPVIMAGLRVA-------TVSTVALTTVGSLVAYGGLGNLIKDGVTTNFR 198

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++ A L  + +  + D L+
Sbjct: 199 AELMTASLLCVLLAVVLDALI 219



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   VV +I   +I  P+ +     P + + +      +   P+   FPL+V        
Sbjct: 44  LVITVVSVIAGVVIAFPLALLARRLPALETSVLGVTTAVYTIPSLALFPLLVPFTGLSAT 103

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+L  +      +L     G  + P + +E A        R    + LP   P  
Sbjct: 104 TVVIGLALYALTILVRSML----EGLRSVPEEVRESAVGLGYGATRLLVLVELPLALPVI 159

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A       + V  + ++G       GLG  I +        E++   L+     
Sbjct: 160 MAGLRVATVSTVALTTVGSLVAYG-------GLGNLIKDGVTTNFRAELMTASLLCVLLA 212

Query: 567 LALNRFL 573
           + L+  +
Sbjct: 213 VVLDALI 219


>gi|218673606|ref|ZP_03523275.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli GR56]
          Length = 209

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   +V  +    L          D +  +       +LP     T   +     +  +
Sbjct: 46  IVTLAIVWQVYASYLDNPLLFPTLSDTIITLIDRFADGTLPARIWTTLQILFMGYALGTV 105

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   LA  +R     L  +  +   +P +  L   +++F             + +F 
Sbjct: 106 LAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLG--------ASSLVFV 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           +  S +W +  + +     + R L  V  ++ L+G      + VP + P ++
Sbjct: 158 LVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPSIL 209



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 45/122 (36%), Gaps = 4/122 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+  + +   + +++   + +        +  ++    +    PA    PL +       
Sbjct: 92  TLQILFMGYALGTVLAALLTVLAINTRIGTDFLETMTAMFNPLPAISLLPLALIWFGLGA 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +    L  +++    W +  N  +G        + V +++ +TG  +   I++P  FP 
Sbjct: 152 SS----LVFVLVHSVLWAVALNTHSGFLGVSRTLRMVGANYGLTGISYVLRILVPAAFPS 207

Query: 506 YV 507
            +
Sbjct: 208 IL 209


>gi|223938480|ref|ZP_03630373.1| phosphate ABC transporter, inner membrane subunit PstC [bacterium
           Ellin514]
 gi|223892899|gb|EEF59367.1| phosphate ABC transporter, inner membrane subunit PstC [bacterium
           Ellin514]
          Length = 391

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 21/182 (11%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLY 127
            +I+LLF+   A  +A       S R   +L P ++++  IP  +LGF    V+  +   
Sbjct: 172 TIIALLFSVPLALGSAIYVSQLASPRKRELLKPAIELLAGIPSVVLGFFALIVMATVLQN 231

Query: 128 PGKVIGAELAAIFAIFTS-QVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                    A +  I     +  + FS+   +L ++PR   + + +   S WQ  W + +
Sbjct: 232 IFGYQSRLNAFVAGIALGLAIIPVVFSIAEDALTSVPRSYSQAALALGSSKWQAAWKIVL 291

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++PG+   +++                +G+T+I L   G+   ++    DL   + A 
Sbjct: 292 PAAIPGVFAAVVLGFGRA-----------IGETMIVLLASGNASIVSWNIFDLTRTVTAT 340

Query: 246 LT 247
           + 
Sbjct: 341 VA 342



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 65/162 (40%), Gaps = 10/162 (6%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQ 423
           +I    +      ++ L   ++   ++ ++ +  + +   I++     P     ++P  +
Sbjct: 148 FIWQPVSQIQKFNIVPLIIGSLKVTIIALLFSVPLALGSAIYVSQLASPRKRELLKPAIE 207

Query: 424 LLAAFPANV--FFPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAF 475
           LLA  P+ V  FF L+V       +  Y    N +++ + +      ++F++     ++ 
Sbjct: 208 LLAGIPSVVLGFFALIVMATVLQNIFGYQSRLNAFVAGIALGLAIIPVVFSIAEDALTSV 267

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           P  + + A +   + W+    I+LP   P      +   G A
Sbjct: 268 PRSYSQAALALGSSKWQAAWKIVLPAAIPGVFAAVVLGFGRA 309


>gi|317482052|ref|ZP_07941077.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916619|gb|EFV38016.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 335

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +  +  I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALLDNIATVFTYQDGIFGRWF-VNTILYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K+     + A + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRKLCFVIIIGAISVPGIALAVPQFLLFAKMGLTNTPWSMIIPSLVSTFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P++  E A       +R +  I LP + P  VT A+ A    W N  +   +
Sbjct: 211 WIFSDQAVPDELLEAARVDGAGEFRTFFQISLPLLAPGIVTTALFAIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 271 LKDSNWYPLTIGLNQWKDQASTAG 294



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R  G  L  ++ I   S+P +       +
Sbjct: 123 RWFVNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKLCFVIIIGAISVPGIALAVPQFL 182

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           ++        + +      S   +P +L E +R      ++ F+
Sbjct: 183 LFAKMGLTNTP----WSMIIPSLVSTFGLYLMWIFSDQAVPDELLEAARVDGAGEFRTFF 238

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 239 QISLPLLAPGIVTTALFAIVATWN 262


>gi|302870307|ref|YP_003838944.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
 gi|302573166|gb|ADL49368.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora aurantiaca ATCC 27029]
          Length = 240

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 8/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +             A+++  L  +        S R G +++ + ++  +IP L  
Sbjct: 18  TNPGGVLDRLGEHLSMSALAVLLGCLVAWPIGLWLGHSGRGGGLVLLVSNVTLAIPTLAL 77

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + +  +     +  + +R   LS
Sbjct: 78  LTILPLTFLGFGRPAVVVALAVFAVP-------PLLANAFTGVRQADPEARDAARGMGLS 130

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMS-MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           G Q    + +P ++P L      + +       +AS +   G   I   G G  IA    
Sbjct: 131 GGQVLRRVELPLAVPYLAAGFRTATVQVVATAALASFVNGGGLGQIIRAGFGLDIAAGGG 190

Query: 235 EQDLLAILYAMLTMLGVIFL 254
           +     +L A L +L    L
Sbjct: 191 QIIAGGVLVAGLALLVEGVL 210



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 10/182 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ ++ +   + +   V+      +    + +++  ++  P+G+W+G        +   
Sbjct: 6   QAVVWLNDPLNWTNPGGVLDRLGEHLSMSALAVLLGCLVAWPIGLWLGHSGRGGGLVLLV 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      ++      +     +    +        +L N   G      + ++
Sbjct: 66  SNVTLAIPTLALLTILPLTFLGFGRPAVVVALAVFAVP---PLLANAFTGVRQADPEARD 122

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++G +  R + LP   PY   G  TA       + ++   + G       GLG 
Sbjct: 123 AARGMGLSGGQVLRRVELPLAVPYLAAGFRTATVQVVATAALASFVNGG-------GLGQ 175

Query: 542 YI 543
            I
Sbjct: 176 II 177


>gi|229818951|ref|YP_002880477.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229564864|gb|ACQ78715.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 252

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 87/259 (33%), Gaps = 18/259 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
           +RR+      L A V V  +                 V    + L    L  + + T   
Sbjct: 4   TRRVLLPSLVLAALVAVWELAVRAAELPPFVLPAPTAVLAAGVRLH-DELGAHLATTLTE 62

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
               +          A + A    +G  ++P++ + Q++P +      +++      GKV
Sbjct: 63  AGLGLAAGAFAGAGIAVVVALVPVIGDAVLPLVVLTQTVPTVVLAPLLILWAGFGIGGKV 122

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +   L   F +  +           ++     +L ++ R        +   + +P ++PG
Sbjct: 123 VLVALTTFFPVMVA--------TSSAMARADAELADMVRGLGGGRRDELALVRLPAALPG 174

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA---LAIKEQDLLAILYAMLTM 248
            +  + ++ +      V +E +          GIG +I     A     +L  +  +  +
Sbjct: 175 ALAGLRIAATYAIGAAVVAEYLAGAS------GIGVFIQHSRKAYAVDQILVGVLLVGLV 228

Query: 249 LGVIFLYDQLLFRPMIVWS 267
            G + L    L R ++ W 
Sbjct: 229 TGALVLAVDALSRRLVPWQ 247



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 10/150 (6%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           + +   P I   + P   L    P  V  PL++    +          +L+   T + ++
Sbjct: 79  VVVALVPVIGDAVLPLVVLTQTVPTVVLAPLLILWAGFGIGGK----VVLVALTTFFPVM 134

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
               +  +    +  ++              + LP   P  + G   A   A  A++V+E
Sbjct: 135 VATSSAMARADAELADMVRGLGGGRRDELALVRLPAALPGALAGLRIAATYAIGAAVVAE 194

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             +        +G+G +I  S +  +  ++
Sbjct: 195 YLAG------ASGIGVFIQHSRKAYAVDQI 218


>gi|171911661|ref|ZP_02927131.1| probable permease component of ABC transporter [Verrucomicrobium
           spinosum DSM 4136]
          Length = 564

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 134/443 (30%), Gaps = 46/443 (10%)

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G  +  I          +  ++  SL N+   L+E + +     W++FW + +P  MPG+
Sbjct: 145 GQMVGVIIMTTLHLFPILYLNVTASLSNLDPALDEAAANLGCPPWRRFWRITLPLIMPGV 204

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                +     +  +    +                I  ++++       YA++ ++ + 
Sbjct: 205 FAGGTIVFIWAFTELGVPLVFDYTRVTSVQ------IYNSLRDLSDNPQPYALVVVVMLA 258

Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPAD------SWVLYLFRKTNFLRFIGYSSWNFF 306
            +   L+ + +   S+     R              +W +        L  +        
Sbjct: 259 TVLIYLVSKYLFGRSHVLGGGRNVVAREPVRLGPVWAWGVTALFGGIILIAMVPHIGVVL 318

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             LS    +     G+   H+ +      +   VS  L       +  V +G+   +   
Sbjct: 319 LSLSKGWYQSVFPEGLTLQHYRDALSHEMTLNAVSNSLKYASLATLLDVVLGLG-IAYVN 377

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           + +    + +L V+ +  + +  +V+            G     R               
Sbjct: 378 VRSRLPARHLLDVMAMLPLAVPGIVLAF----------GYLAMAREGA------------ 415

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P     +     +P L + +        Y++ +  AG      D ++ A + 
Sbjct: 416 --------PFHWLMLGE---DPVLLMVIAYSVRRLPYVVRSATAGLQQVSPDLEDAAQNL 464

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               WR    + LP I P  + G + A   A      S V +    H   T     +  S
Sbjct: 465 GAPPWRALLRVTLPLITPNLIAGGLLAFAFAMLEVADSMVLAQQAGHYPITKAIYLLLHS 524

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
              G +    LGV  M    + L
Sbjct: 525 LGNGPYLSAALGVWAMIFLGVTL 547



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 69/190 (36%), Gaps = 11/190 (5%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ILGFLTFTVVYFMNLY 127
            A ++ ++     A +  +SR     L   LD+M  +P      +L F    +      +
Sbjct: 361 LATLLDVVLGLGIAYVNVRSRLPARHL---LDVMAMLPLAVPGIVLAFGYLAMAREGAPF 417

Query: 128 PGKVIGAELAAIFAIFTS--QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              ++G +   +  I  S  ++  +  S    L  +  DLE+ +++     W+    + +
Sbjct: 418 HWLMLGEDPVLLMVIAYSVRRLPYVVRSATAGLQQVSPDLEDAAQNLGAPPWRALLRVTL 477

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P   P L+   +++ +     V  S ++       P+      +  ++     L+    +
Sbjct: 478 PLITPNLIAGGLLAFAFAMLEVADSMVLAQQAGHYPITKAIYLLLHSLGNGPYLSAALGV 537

Query: 246 LTMLGVIFLY 255
             M+ +    
Sbjct: 538 WAMIFLGVTL 547


>gi|332716948|ref|YP_004444414.1| proline/glycine/betaine ABC transporter membrane spanning protein
           [Agrobacterium sp. H13-3]
 gi|325063633|gb|ADY67323.1| proline/glycine/betaine ABC transporter membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 225

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 10/204 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     VI L    +      + +A +I +PVG+++G        I   A  L + P+  
Sbjct: 11  WTGSDGVIVLVGQHLAYSFAALFLACLIGLPVGLYVGHTGRGVVFIAGLANALRSLPSLG 70

Query: 433 FFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              L+V        +   ++    ++++      I+    AG +A      + A      
Sbjct: 71  LIALLVIVFGPVFASDMAFIVPSLIVLVLLAVPPIMTGSYAGIAAVDPAAVDAARGMGKR 130

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P   +G  +A     + + ++   S G       GLG  I +   +
Sbjct: 131 PLDILFDVELPCALPLIFSGLRSATLQIISTATIAAYVSLG-------GLGRLIIDGRAQ 183

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
             + ++  G +++    L ++  +
Sbjct: 184 NDYYQMAAGAVLVGALALTVDLII 207



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 8/187 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +A+ ++ L           + R  + +  + + ++S+P LG +   V+ F  ++   + 
Sbjct: 29  FAALFLACLIGLPVGLYVGHTGRGVVFIAGLANALRSLPSLGLIALLVIVFGPVFASDMA 88

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               + I  +  + V  +    Y  +  +     + +R          + + +P ++P +
Sbjct: 89  FIVPSLIVLVLLA-VPPIMTGSYAGIAAVDPAAVDAARGMGKRPLDILFDVELPCALPLI 147

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +  +          +  + +G       G+G  I     + D   +    + +  + 
Sbjct: 148 FSGLRSATLQIISTATIAAYVSLG-------GLGRLIIDGRAQNDYYQMAAGAVLVGALA 200

Query: 253 FLYDQLL 259
              D ++
Sbjct: 201 LTVDLII 207


>gi|291298559|ref|YP_003509837.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290567779|gb|ADD40744.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 227

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 77/217 (35%), Gaps = 17/217 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I  +  +L           + ++V++ + +     L+A+SR    V++    ++ +IP L
Sbjct: 20  IEDNAATLGSALLEHLELTVVSVVVAAVISIPLGILSARSRLAATVILSGSGVLYTIPSL 79

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                   +         +G  + A+  I  + +          L  +P D+ + +    
Sbjct: 80  AVFALLAPFLGQSLITVEVGLVMYAMLIIVRATLT--------GLRQVPPDVIDAAGGMG 131

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S       + +P ++P ++  + ++       V    M+ +G  V      G  +    
Sbjct: 132 YSRVHLLTRVELPLAVPSIMTGLRIA------TVSTVAMVTIGAVVGHGGLGGLILTGFR 185

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
                  IL A +  + +   ++ LL    R M  W+
Sbjct: 186 NNLYKPQILTATILCIALALAFEVLLSLVTRLMTPWT 222



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 10/171 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+GI        ++ I   + +L   P+   F L+   +    +   + L +  +     
Sbjct: 51  PLGILSARSRLAATVILSGSGVLYTIPSLAVFALLAPFLGQSLITVEVGLVMYAMLI--- 107

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            I+   + G    P D  + A     +       + LP   P  +TG   A         
Sbjct: 108 -IVRATLTGLRQVPPDVIDAAGGMGYSRVHLLTRVELPLAVPSIMTGLRIA------TVS 160

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + + G +       G  +         P+++   ++     LA    L
Sbjct: 161 TVAMVTIGAVVGHGGLGGLILTGFRNNLYKPQILTATILCIALALAFEVLL 211


>gi|256391871|ref|YP_003113435.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256358097|gb|ACU71594.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 289

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 6/209 (2%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFT 119
           L  Y   + +    +  +S++     A   ++ R  G  +  +  +  Q  P + FL   
Sbjct: 75  LGHYFLNSAIVASCSTAVSVVIAVFAAYAVSRYRFAGRKVFSVTVLSTQMFPGILFLLPL 134

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRSFRLSG 176
            + F+N+     I      +  I T   + + FS++       +IPRDL+E +       
Sbjct: 135 YLIFVNIGNSTGIQLSDTRLGLIITFLTFTLPFSIWMLVGYFDSIPRDLDEAASVDGSGP 194

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
               + + VP ++PG+V   + S    W  V+ + ++    T     G+  Y +    + 
Sbjct: 195 ISTLFKILVPAALPGIVTVAVYSFMTAWGEVLFASVMTDDSTRTLAVGLRDYASQ--NDV 252

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
               I+ A L +   +     L+ + +I 
Sbjct: 253 YWNQIMAASLVVSIPVVAGFLLMQKYLIA 281



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 13/240 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIII 396
              +  +    V   V +  A+  +   +    Y D+   + LG     +         +
Sbjct: 33  GIPLWVMVSSSVKSLVEVQNAFHWLPTHLTLSPYIDMWSTVPLGHYFLNSAIVASCSTAV 92

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQL-LAAFP-ANVFFPLVVSCVSYYHL------NP 448
           + +I +     +        K+     L    FP      PL +  V+  +       + 
Sbjct: 93  SVVIAVFAAYAVSRYRFAGRKVFSVTVLSTQMFPGILFLLPLYLIFVNIGNSTGIQLSDT 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L L +  +  T  + ++ ++    + P D  E AS            I++P   P  VT
Sbjct: 153 RLGLIITFLTFTLPFSIWMLVGYFDSIPRDLDEAASVDGSGPISTLFKILVPAALPGIVT 212

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            A+ +   AW   + + V +         GL  Y ++      + +++   L++   V+A
Sbjct: 213 VAVYSFMTAWGEVLFASVMTDDSTRTLAVGLRDYASQ--NDVYWNQIMAASLVVSIPVVA 270


>gi|253732022|ref|ZP_04866187.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724263|gb|EES92992.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 305

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQV 147
           AK+ +    +   +  +  +P + F       F+     + +      LAA   +    +
Sbjct: 112 AKNNKFTQFVKISISNLAGVPSVVFGILGYTLFVGGAGIEALKMGNSILAAALTMTLLIL 171

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             +  S  +++  +P  + E S     + WQ    + +P ++PG++   ++S+S  
Sbjct: 172 PIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRA 227



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 7/134 (5%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------NPNLWLSLLMIFGTQWY 463
               +  ++     LA  P+ VF  L  +              N  L  +L M       
Sbjct: 114 NNKFTQFVKISISNLAGVPSVVFGILGYTLFVGGAGIEALKMGNSILAAALTMTLLILPI 173

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +      A PN  +E +       W+  R ++LP   P  +TG I +   A   +  
Sbjct: 174 IIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRALGETAP 233

Query: 524 SEVASWGHIHLRTT 537
             +     I L T 
Sbjct: 234 LVLIGIPTILLATP 247


>gi|46908670|ref|YP_015059.1| phosphate ABC transporter permease [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47092784|ref|ZP_00230569.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 4b H7858]
 gi|217963400|ref|YP_002349078.1| phosphate ABC transporter permease PstC [Listeria monocytogenes
           HCC23]
 gi|226225046|ref|YP_002759153.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes Clip81459]
 gi|254825380|ref|ZP_05230381.1| phosphate ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|258611948|ref|ZP_05243322.2| phosphate ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|290892661|ref|ZP_06555653.1| phosphate ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|293596922|ref|ZP_05265620.2| phosphate ABC transporter [Listeria monocytogenes HPB2262]
 gi|300765003|ref|ZP_07074991.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           FSL N1-017]
 gi|46881942|gb|AAT05236.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47018872|gb|EAL09620.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 4b H7858]
 gi|217332670|gb|ACK38464.1| phosphate ABC transporter, permease protein PstC [Listeria
           monocytogenes HCC23]
 gi|225877508|emb|CAS06222.1| Putative phosphate ABC transporter (permease protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258607363|gb|EEW19971.1| phosphate ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|290557721|gb|EFD91243.1| phosphate ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|293583818|gb|EFF95850.1| phosphate ABC transporter [Listeria monocytogenes HPB2262]
 gi|293594623|gb|EFG02384.1| phosphate ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300514303|gb|EFK41362.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           FSL N1-017]
 gi|307572025|emb|CAR85204.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           L99]
 gi|313617211|gb|EFR89703.1| phosphate ABC transporter, permease protein PstC [Listeria innocua
           FSL S4-378]
          Length = 316

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|332312928|gb|EGJ26023.1| Permease [Listeria monocytogenes str. Scott A]
          Length = 321

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 97  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 156

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 157 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 215

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 216 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 275

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 276 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 317



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 94  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 153

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 154 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 213

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 214 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 273

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 274 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 317


>gi|310641205|ref|YP_003945963.1| phosphate abc transporter, permease pstc [Paenibacillus polymyxa
           SC2]
 gi|309246155|gb|ADO55722.1| Phosphate ABC transporter, permease PstC [Paenibacillus polymyxa
           SC2]
          Length = 310

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 21/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  L A  +SL        +  KS +   +L P ++++  IP + +    LT  V   
Sbjct: 98  TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 155

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N++ G+ IG  LA    +    +  +T  M  +L ++P  L E S +   + WQ    +
Sbjct: 156 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 214

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--------------GSYI 229
            +P  +P L+  +++ M+  +   +A +M++     IP   +              G+  
Sbjct: 215 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIPHSLLESASTLTSVITLSMGNTA 274

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             ++    L ++   +L M  +  L  +LL R 
Sbjct: 275 MGSVHNNALWSMALVLLLMTFIFVLLVRLLERR 307



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 39/296 (13%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-----VNHF 371
              +   R ++ E   ++ ++  V +++ +    V    + G+A  ++  +         
Sbjct: 15  RSRVMKERHYWEEWTGRIYTSVCVVFLVAVIVSIVYFVASKGVATFAVNGVSLREFFFGT 74

Query: 372 TYQDVLYVIWLGCITMFRVVVLI-IIASIIWIPVGIWIGFR------PHISSKIQPFAQL 424
            +         G +        + I+A++I  P+ +                 +QP  +L
Sbjct: 75  KWSPDGEPKSFGALPFITGSFAVTILAALIASPLSLCAALFMTEIVPKSGKRILQPAIEL 134

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASA 474
           L+  P+ V+         PL+ +      +       +L  MI  T   I+       S+
Sbjct: 135 LSGIPSVVYGFVGLTVIVPLLRNVFGGQGIGILAGCLVLSVMILPTITSIM---ADALSS 191

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P   +E + +   T W+    +I+P + P  +TG I     A+  ++  ++      H+
Sbjct: 192 LPGGLRESSYALGATRWQTIARVIIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHI 251

Query: 535 RTTGL--------------GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             + L              G     S    +   + L +L+M    + L R L   
Sbjct: 252 PHSLLESASTLTSVITLSMGNTAMGSVHNNALWSMALVLLLMTFIFVLLVRLLERR 307


>gi|296103775|ref|YP_003613921.1| putative glycine/betaine/choline ABC transporter permease component
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058234|gb|ADF62972.1| putative glycine/betaine/choline ABC transporter permease component
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 245

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 21/208 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I L +  L   A  + + ++  +   ++ T  +       R    ++  I  I Q+ P +
Sbjct: 47  INLALAHLWLVALSSAIAVVLGVGAGIVVTRPWG------REFRPLVETIAAIGQTFPPV 100

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V              +  AI A+    V  +       + ++P  +  V+    
Sbjct: 101 AVLAIAVPVIG--------FGQQPAIIALILYGVLPVLQGTLAGIASVPASVLSVAEGMG 152

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  Q+   + +P + P ++  +  S+         +  +           +G+ I + +
Sbjct: 153 MSSGQRLCKVELPLAAPVIIAGIRTSVIINIGTATIASTVGANT-------LGTPIIIGL 205

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +   I+   + +     + D+L  R
Sbjct: 206 SGFNTAYIVQGAVLVALAAIVIDRLFER 233



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   +  ++  +    A  S  +             I L    ++ V +   IA ++ +
Sbjct: 10  WLTGLFVALLFLMPHSGALFSSLFPGLPRPVYQQESFINLALAHLWLVALSSAIAVVLGV 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             GI +        + +P  + +AA     P      + V  + +      + L L  + 
Sbjct: 70  GAGIVV--TRPWGREFRPLVETIAAIGQTFPPVAVLAIAVPVIGFGQQPAIIALILYGVL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                +L   +AG ++ P     VA    ++  +    + LP   P  + G  T+     
Sbjct: 128 ----PVLQGTLAGIASVPASVLSVAEGMGMSSGQRLCKVELPLAAPVIIAGIRTSVIINI 183

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + ++         +    LG  I       +   +V G +++    + ++R  
Sbjct: 184 GTATIA-------STVGANTLGTPIIIGLSGFNTAYIVQGAVLVALAAIVIDRLF 231


>gi|227893679|ref|ZP_04011484.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
 gi|227864539|gb|EEJ71960.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ultunensis
           DSM 16047]
          Length = 213

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 79/195 (40%), Gaps = 15/195 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +L++++I+LL   +   +  + +     L+ I  ++ S+P   F       F 
Sbjct: 16  MIQHAQMVLTSLLIALLVAIILIAIFLRKKNWLNALIYIFSLLYSVPSYAF-------FA 68

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L P   +G   A I   F S+   +  +    +  +  +  EV++   ++  + F  + 
Sbjct: 69  LLIPITGLGKTSAIIVLAFYSEYV-LLRTFITGIQEVDPNYIEVAKGVGMTQQEIFVKVQ 127

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P +   + ++++        +  I  G       G+G  +   ++   ++ IL+ 
Sbjct: 128 LPLALPAVFSGLQIALASTMAIATIASTISAG-------GLGDLLFEGLQTSRVVPILWG 180

Query: 245 MLTMLGVIFLYDQLL 259
            +  + +  +   +L
Sbjct: 181 TILTVVLTLMCIAVL 195



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++IA ++ I +      + +  + +     LL + P+  FF L++        +  
Sbjct: 23  VLTSLLIALLVAIILIAIFLRKKNWLNALIYIFSLLYSVPSYAFFALLIPITGLGKTS-- 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +++ F +++ +L   I G      ++ EVA    +T    +  + LP   P   +G
Sbjct: 81  --AIIVLAFYSEYVLLRTFITGIQEVDPNYIEVAKGVGMTQQEIFVKVQLPLALPAVFSG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++         +   GLG  + E  +      ++ G ++     L  
Sbjct: 139 LQIALASTMAIATIA-------STISAGGLGDLLFEGLQTSRVVPILWGTILTVVLTLMC 191

Query: 570 NRFL 573
              L
Sbjct: 192 IAVL 195


>gi|262047582|ref|ZP_06020537.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-3A-US]
 gi|260572158|gb|EEX28723.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-3A-US]
          Length = 295

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 70/182 (38%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L         R +            +      +   ++   +ISL  
Sbjct: 20  IVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRDQLFNSIYLLILTTIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A   A   K   +  ++   + I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   + H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +++  II+  I +   I++        +++ I+   Q+L++ P+ V   F  
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P D +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|323342103|ref|ZP_08082336.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464528|gb|EFY09721.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 407

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 85/204 (41%), Gaps = 17/204 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIP--ILGFLTF 118
           + L  L  +  SLLF       AA           +  +L   ++++  +P  I G L  
Sbjct: 186 SILATLLLIATSLLFALPLGIGAALYLTEIAPDTAMTRMLESSIEMLAGVPSIIFGLLGI 245

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++ +  +      + L     +    +  +  S+ +SL  +P  L   S S   +  Q
Sbjct: 246 AVLFPITAFFNVSGLSILLGGMTMAIILLPVIIRSVKESLLVVPDSLRSASLSLGGTQTQ 305

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI---GS----YIAL 231
             + + +P ++PG++  +++S+S       A+ +  +G  V  +PG+   G+    +I  
Sbjct: 306 TIFKVVLPSALPGILSAVLLSVSRI-IGESAALIYTMGTFVNDVPGLTQGGTSLAVHIWS 364

Query: 232 AIKEQDLLAILYAMLTMLGVIFLY 255
            + ++     L + ++++ +  + 
Sbjct: 365 VMSQEQPNFELASAISIVILALVL 388



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPL 436
           ++   ++LI  + +  +P+GI              ++  ++   ++LA  P+ +F    +
Sbjct: 186 SILATLLLIATSLLFALPLGIGAALYLTEIAPDTAMTRMLESSIEMLAGVPSIIFGLLGI 245

Query: 437 VVSCVSYYHLNPNLWLSLL----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            V        N +    LL    M       I+ +V       P+  +  + S   T  +
Sbjct: 246 AVLFPITAFFNVSGLSILLGGMTMAIILLPVIIRSVKESLLVVPDSLRSASLSLGGTQTQ 305

Query: 493 WWRYIILPGIFPYYVTGAITAC------GGAWNASIVSEVASWGHIHLRTTGLGAYIAE- 545
               ++LP   P  ++  + +         A   ++ + V     +    T L  +I   
Sbjct: 306 TIFKVVLPSALPGILSAVLLSVSRIIGESAALIYTMGTFVNDVPGLTQGGTSLAVHIWSV 365

Query: 546 -STEKGSFPEVVLGVLIMCCFVLALN 570
            S E+ +F       +++   VL LN
Sbjct: 366 MSQEQPNFELASAISIVILALVLILN 391


>gi|320162175|ref|YP_004175400.1| phosphate ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319996029|dbj|BAJ64800.1| phosphate ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 409

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 19/141 (13%)

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           F F     AA        K  R+  +L   ++ +  +P + +    +  F+        G
Sbjct: 191 FAFPIGVGAAIYLEEYADKRNRINRILQTNIENLAGVPSIIYGILGLAVFVRALAPITSG 250

Query: 134 AE-----------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           A            L+    +    +  +  S  ++L  +P  L E S +   + WQ  W+
Sbjct: 251 AAFGMDAGSGRTILSGGLTMALLVLPILIISSQEALRAVPNSLREASFAMGATRWQTIWH 310

Query: 183 LGVPFSMPGLVWNMMMSMSGG 203
             +P+++PG++   ++++S  
Sbjct: 311 HVLPYALPGILTGTILAVSRA 331



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 20/178 (11%)

Query: 360 AWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI----GFRPHI 414
           AW S  ++     T  D+  V      ++  +++ I+ A  I +   I++      R  I
Sbjct: 154 AWLSWDFLQRSMATNPDLAGVRQAIKGSLLIILITILFAFPIGVGAAIYLEEYADKRNRI 213

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT-------------- 460
           +  +Q   + LA  P+ ++  L ++             +  M  G+              
Sbjct: 214 NRILQTNIENLAGVPSIIYGILGLAVFVRALAPITSGAAFGMDAGSGRTILSGGLTMALL 273

Query: 461 QWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
              IL  +      A PN  +E + +   T W+   + +LP   P  +TG I A   A
Sbjct: 274 VLPILIISSQEALRAVPNSLREASFAMGATRWQTIWHHVLPYALPGILTGTILAVSRA 331


>gi|42523159|ref|NP_968539.1| phosphate ABC transporter permease [Bdellovibrio bacteriovorus
           HD100]
 gi|39575364|emb|CAE79532.1| Permease protein of phosphate ABC transporter [Bdellovibrio
           bacteriovorus HD100]
          Length = 312

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 82/224 (36%), Gaps = 17/224 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF- 115
                     L + VI+L       T+AA             +L P+L+++ ++P + + 
Sbjct: 83  YGILPLLSGTLLSTVIALSVAIPLGTVAAAFLSEYVRPSAREILKPVLELLAAVPTVVYG 142

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L F       + P       L+A   I    V  ++     ++ ++P  L E S + 
Sbjct: 143 YFALLFVTPLLQKIIPNLGGFNVLSAGIVIGVMIVPYVSSLSEDAMRSVPNHLREASFAV 202

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW----FFVVASEM---IVVGDTVIPLPGI 225
             S  Q  + + +P +  G+    ++ +S          +A+ M   + +  T       
Sbjct: 203 GASRMQTAFRVVIPAAFSGITSAYILGISRALGETMVVAIAAGMQPNLTINPTEPAATIT 262

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              + +++ +    +I Y  + + G+  L   L F  + +W  K
Sbjct: 263 AFIVQVSLGDLPHGSIGYQSIYVAGLSLLVLTLCFNIVGLWLRK 306



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 18/211 (8%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +   V   + I    V   +          ++ +           +     +   ++ 
Sbjct: 36  LAAASSVLVTIGIVGILVTESMPFFAHVSLKDFLTDTQWTPLFENARYGILPLLSGTLLS 95

Query: 394 IIIASIIWIPVGIWIG------FRPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA  + IP+G           RP     ++P  +LLAA P  V+         PL+  
Sbjct: 96  TVIALSVAIPLGTVAAAFLSEYVRPSAREILKPVLELLAAVPTVVYGYFALLFVTPLLQK 155

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +        L   +++      Y+         + PN  +E + +   +  +    +++
Sbjct: 156 IIPNLGGFNVLSAGIVIGVMIVPYVSSLSEDAMRSVPNHLREASFAVGASRMQTAFRVVI 215

Query: 500 PGIFPYYVT----GAITACGGAWNASIVSEV 526
           P  F    +    G   A G     +I + +
Sbjct: 216 PAAFSGITSAYILGISRALGETMVVAIAAGM 246


>gi|310779967|ref|YP_003968299.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Ilyobacter polytropus DSM 2926]
 gi|309749290|gb|ADO83951.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Ilyobacter polytropus DSM 2926]
          Length = 281

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 73/188 (38%), Gaps = 5/188 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  + + + V+GI   ++           I +     +    +      + L  +  ++ 
Sbjct: 18  VIGICSILPVLGIFAYIIFKGVPAITWSFITEGPKSGMREGGIFPVIVGSILLTIGTIIA 77

Query: 79  SLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ F  +      +      L  ++   +  +  IP + +  F + +F+           
Sbjct: 78  AVPFGILTGIYLVEYSNDNWLRRIINLTIVNLAGIPSIVYGLFGMAFFVMALGMGRSLMA 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            +    I +  V  +  +  +SL  IP+ + E S +   + W+  W + +P ++PG++  
Sbjct: 138 GSLTLGIMSLPV--IITATRESLLAIPKSMREASLALGATRWETTWKIVLPAALPGILTG 195

Query: 196 MMMSMSGG 203
           +++S+S  
Sbjct: 196 IILSVSRA 203



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  ++ I     V G+   I ++ +  I   F  +     +  G I    V  +++    
Sbjct: 15  IIKVIGICSILPVLGIFAYIIFKGVPAITWSFITEGPKSGMREGGIFPVIVGSILLTIGT 74

Query: 400 I--WIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNP 448
           I   +P GI  G           +   I      LA  P+ V+  F +    ++      
Sbjct: 75  IIAAVPFGILTGIYLVEYSNDNWLRRIINLTIVNLAGIPSIVYGLFGMAFFVMALGMGRS 134

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  SL +   +   I+        A P   +E + +   T W     I+LP   P  +T
Sbjct: 135 LMAGSLTLGIMSLPVIITATRESLLAIPKSMREASLALGATRWETTWKIVLPAALPGILT 194

Query: 509 GAITACGGA 517
           G I +   A
Sbjct: 195 GIILSVSRA 203


>gi|322435859|ref|YP_004218071.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
 gi|321163586|gb|ADW69291.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX9]
          Length = 209

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 9/137 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                     AM ++         L  +  RL   ++ I +I+Q IP L         F 
Sbjct: 15  TFEHLWLTFFAMALAAAVGIPTGILLTRHERLAKPIITIANIIQVIPSLAL-------FG 67

Query: 125 NLYPGKVIGAELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            L P   +G   A  AI A+    +  +  S Y  + ++   L +V+ +  ++  Q+   
Sbjct: 68  LLLPVPWLGENAARLAILALTGYALLPILRSTYAGIRSVDPALIDVAAAMGMTPTQRLLK 127

Query: 183 LGVPFSMPGLVWNMMMS 199
           + +P     ++  +  +
Sbjct: 128 VELPLGASVILAGLRTA 144



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 1/144 (0%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F +Q    +  L    ++     + +A+ + IP GI +     ++  I   A ++   P
Sbjct: 2   TFLHQHASEIARLTFEHLWLTFFAMALAAAVGIPTGILLTRHERLAKPIITIANIIQVIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F L+   V +   N      L +       IL +  AG  +      +VA++  +T
Sbjct: 62  SLALFGLL-LPVPWLGENAARLAILALTGYALLPILRSTYAGIRSVDPALIDVAAAMGMT 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITA 513
             +    + LP      + G  TA
Sbjct: 121 PTQRLLKVELPLGASVILAGLRTA 144


>gi|330507562|ref|YP_004383990.1| phosphate ABC transporter inner membrane subunit [Methanosaeta
           concilii GP-6]
 gi|328928370|gb|AEB68172.1| phosphate ABC transporter, inner membrane subunit [Methanosaeta
           concilii GP-6]
          Length = 415

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   +L AM+IS       A      +KS RL  ++   +  +  +P + +  F + + +
Sbjct: 194 SLWMVLGAMLISSPLGIGAAIYLHEYSKSERLNRLITIAVSCLNGVPSVVYGLFGLAFLV 253

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +L+   +I   +     +    +  +  +  ++L ++P  L E S +   + WQ    + 
Sbjct: 254 SLFGVSLISGSI----ILGLINIPTIILTSQEALKSVPNSLREGSMALGATKWQTIRKVV 309

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++  ++M ++  
Sbjct: 310 LPSAMPGILTGVIMGVAKA 328



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 5/178 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L    F ++      I W+ +            +    LG  +++ V+  ++I+S + I
Sbjct: 153 LLGGILFIIIYKGIWVINWEFLTSPHRRLGQAGGISTAILG--SLWMVLGAMLISSPLGI 210

Query: 403 PVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
              I++        ++  I      L   P+ V+    ++ +        +  S+++   
Sbjct: 211 GAAIYLHEYSKSERLNRLITIAVSCLNGVPSVVYGLFGLAFLVSLFGVSLISGSIILGLI 270

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               I+        + PN  +E + +   T W+  R ++LP   P  +TG I     A
Sbjct: 271 NIPTIILTSQEALKSVPNSLREGSMALGATKWQTIRKVVLPSAMPGILTGVIMGVAKA 328


>gi|327398900|ref|YP_004339769.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327181529|gb|AEA33710.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 242

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 6/169 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
               +    A  I +     I +H+       + +L    +  VV+    ++II + +GI
Sbjct: 12  LLIIIFDSSAYKIGYFLNSLIHSHYKIAYSESMYYLTFQHVAMVVIATCASTIIGVSLGI 71

Query: 407 WIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
                   ++   I   + +  +FP      L VS V +        +  L I+G  + I
Sbjct: 72  LATRSFGKNLLYPINLISSISQSFPPVAVLALAVSSVGFG---IKPTVIALFIYG-LFPI 127

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + N IAG  +     KE +    ++ W     + LP      ++G  T 
Sbjct: 128 IQNTIAGIISIDKSIKEASIGMGMSEWDLLIKVELPLALTSILSGIRTT 176



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTV 120
               +    ++ A   S +       LA +S  + L   +  I  I QS P +  L   V
Sbjct: 46  YLTFQHVAMVVIATCASTIIGVSLGILATRSFGKNLLYPINLISSISQSFPPVAVLALAV 105

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                     V       + A+F   ++ +  +    + +I + ++E S    +S W   
Sbjct: 106 --------SSVGFGIKPTVIALFIYGLFPIIQNTIAGIISIDKSIKEASIGMGMSEWDLL 157

Query: 181 WYLGVPFSMPGLVWNMMMS 199
             + +P ++  ++  +  +
Sbjct: 158 IKVELPLALTSILSGIRTT 176


>gi|315283628|ref|ZP_07871768.1| phosphate ABC transporter, permease protein PstC [Listeria marthii
           FSL S4-120]
 gi|313612733|gb|EFR86735.1| phosphate ABC transporter, permease protein PstC [Listeria marthii
           FSL S4-120]
          Length = 316

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    VL P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|56461207|ref|YP_156488.1| ABC-type phosphate transport system, permease [Idiomarina
           loihiensis L2TR]
 gi|56180217|gb|AAV82939.1| ABC-type phosphate transport system, permease component [Idiomarina
           loihiensis L2TR]
          Length = 551

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 61/155 (39%), Gaps = 20/155 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           T   +L   +I   F  + A      A K+    ++ + +++ +  +P + +  F + +F
Sbjct: 306 TVFMVLLMSIIVTPFGVIAAVYLHEYAGKNAVTKLIRIAVIN-LAGVPSIVYGVFGLGFF 364

Query: 124 MNLYPGKVIGAE---------------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + +  G +                   L +   +    +  +  S  + L  IP  L E 
Sbjct: 365 VYMVGGSLDQVFYPEALPSPTFGTPGVLWSAVTLAILTLPVVIVSTEEGLSRIPPSLREG 424

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           S S   + W+  W + +P + P ++  ++++++  
Sbjct: 425 SLSLGATKWETIWRIVLPMASPAIMTGLILAVARA 459



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%)

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +     LW ++ +   T   ++ +   G S  P   +E + S   T W     I+LP   
Sbjct: 386 FGTPGVLWSAVTLAILTLPVVIVSTEEGLSRIPPSLREGSLSLGATKWETIWRIVLPMAS 445

Query: 504 PYYVTGAITACGGA 517
           P  +TG I A   A
Sbjct: 446 PAIMTGLILAVARA 459


>gi|220932679|ref|YP_002509587.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
 gi|219993989|gb|ACL70592.1| binding-protein-dependent transport systems inner membrane
           component [Halothermothrix orenii H 168]
          Length = 214

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 77/187 (41%), Gaps = 9/187 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  + + +  + ++W+ VG+ I  + +++  I     L+ A P+   + ++++   +   
Sbjct: 22  LALISIAMFFSLLLWVSVGVIIRNKKNLARGILGVGSLIMAVPSISLYGILMTIPGFGLS 81

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +   +L++   +   I+ NV    +   +   E A    +   +    I LP   P  
Sbjct: 82  RRSAVCALVLY--SMIPIVRNVYTALNEVDDSILEAARGMGMPPLQVLFKIELPLALPVI 139

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       +I+S++   G       GLG  +       +  ++++G L+     
Sbjct: 140 IAGVQTSAVVTVGTAIISDLIGGG-------GLGRMVFTGLAMFNPVKILIGSLLAAIIA 192

Query: 567 LALNRFL 573
           + L+RF 
Sbjct: 193 IILDRFF 199



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 72/197 (36%), Gaps = 13/197 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           ++       +  AM  SLL       +    + L   ++ +  ++ ++P +      +  
Sbjct: 16  RFTVSHLALISIAMFFSLLLWVSVGVIIRNKKNLARGILGVGSLIMAVPSISLYGILMTI 75

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                      +  +A+ A+    +  +  ++Y +L  +   + E +R   +   Q  + 
Sbjct: 76  ------PGFGLSRRSAVCALVLYSMIPIVRNVYTALNEVDDSILEAARGMGMPPLQVLFK 129

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++P ++  +  S        + S++I  G       G+G  +   +   + + IL
Sbjct: 130 IELPLALPVIIAGVQTSAVVTVGTAIISDLIGGG-------GLGRMVFTGLAMFNPVKIL 182

Query: 243 YAMLTMLGVIFLYDQLL 259
              L    +  + D+  
Sbjct: 183 IGSLLAAIIAIILDRFF 199


>gi|47096091|ref|ZP_00233692.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 1/2a F6854]
 gi|224503261|ref|ZP_03671568.1| phosphate ABC transporter, permease protein PstC [Listeria
           monocytogenes FSL R2-561]
 gi|255025956|ref|ZP_05297942.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes FSL J2-003]
 gi|258611480|ref|ZP_05232760.2| phosphate ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258612272|ref|ZP_05269475.2| phosphate ABC transporter [Listeria monocytogenes F6900]
 gi|284802936|ref|YP_003414801.1| hypothetical protein LM5578_2693 [Listeria monocytogenes 08-5578]
 gi|284996077|ref|YP_003417845.1| hypothetical protein LM5923_2642 [Listeria monocytogenes 08-5923]
 gi|293596672|ref|ZP_05263409.2| phosphate ABC transporter [Listeria monocytogenes J2818]
 gi|47015552|gb|EAL06484.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258600457|gb|EEW13782.1| phosphate ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610381|gb|EEW22989.1| phosphate ABC transporter [Listeria monocytogenes F6900]
 gi|284058498|gb|ADB69439.1| hypothetical protein LM5578_2693 [Listeria monocytogenes 08-5578]
 gi|284061544|gb|ADB72483.1| hypothetical protein LM5923_2642 [Listeria monocytogenes 08-5923]
 gi|293591403|gb|EFF99737.1| phosphate ABC transporter [Listeria monocytogenes J2818]
          Length = 316

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|325526415|gb|EGD04004.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. TJI49]
          Length = 150

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 6/138 (4%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++    Y+  +     + L+   T + +     +G ++    + +VA +           
Sbjct: 3   LLPLTFYFFPSSYSAAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTLGANARFLVLR 62

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + +P   P+   G       ++   +V+E+          +GLG Y++ +    S+  + 
Sbjct: 63  VAIPAALPHVFVGIFMGLSASFTVLVVAEMMG------VKSGLGWYLSWAQGWASYVNMY 116

Query: 557 LGVLIMCCFVLALNRFLW 574
             +L+M      L   L+
Sbjct: 117 AALLVMALLFSGLIALLF 134



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 14/147 (9%)

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L  T  +F          +  AA F I  +  + +    +  + ++ R   +V+R+  
Sbjct: 2   ALLPLTFYFF--------PSSYSAAAFLIALATGFPVAVLTWSGVASVNRQYYDVARTLG 53

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +       + +P ++P +   + M +S  +  +V +EM+ V        G+G Y++ A 
Sbjct: 54  ANARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMGVKS------GLGWYLSWAQ 107

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLF 260
                + +  A+L M  +      LLF
Sbjct: 108 GWASYVNMYAALLVMALLFSGLIALLF 134


>gi|59801776|ref|YP_208488.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           FA 1090]
 gi|293398578|ref|ZP_06642756.1| sulfonate/nitrate/taurine transport system permease [Neisseria
           gonorrhoeae F62]
 gi|59718671|gb|AAW90076.1| putative ABC transporter, permease protein [Neisseria gonorrhoeae
           FA 1090]
 gi|291611049|gb|EFF40146.1| sulfonate/nitrate/taurine transport system permease [Neisseria
           gonorrhoeae F62]
          Length = 233

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 73/169 (43%), Gaps = 14/169 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R+ + +  A++  L    V   +A   +    +L P++ I+ ++P + ++   + +F   
Sbjct: 78  RSVVGISVALIAGLAAGLVAGLVAGSFKTAMALLKPVITILLAMPPIIWVVMALFWFGFG 137

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P        + +F I          S    + ++ +  EE+  +++L   +K  YL +P
Sbjct: 138 NP--------SVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIRYLYIP 189

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
                ++ ++ ++++ G   V+ +E++          G+G+ IA A   
Sbjct: 190 HLTGYVISSVGVAVAMGVKAVIMAELLGASK------GVGARIADARAM 232



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 75/184 (40%), Gaps = 13/184 (7%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           ++ HF   ++   +W   + +   ++  + A ++    G+  G      + ++P   +L 
Sbjct: 63  LLKHFQENEIGISLWRSVVGISVALIAGLAAGLVA---GLVAGSFKTAMALLKPVITILL 119

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P  ++  + +    + + +    + +L+   T      +   G ++     +E+  ++
Sbjct: 120 AMPPIIWVVMALFWFGFGNPSVLFTIIVLVAPLTF----ASAAVGMASVNKQHEELFDAY 175

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            +   +  RY+ +P +  Y ++    A      A I++E+         + G+GA IA++
Sbjct: 176 KLGRLKKIRYLYIPHLTGYVISSVGVAVAMGVKAVIMAELLG------ASKGVGARIADA 229

Query: 547 TEKG 550
               
Sbjct: 230 RAML 233


>gi|260464304|ref|ZP_05812496.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259029928|gb|EEW31212.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 384

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 91/295 (30%), Gaps = 15/295 (5%)

Query: 281 ADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340
           A + ++     +    F G +   +F  L+       R + V+    P       + + +
Sbjct: 78  AGAHLVAWLLISGIAGFEGSALAPYFLLLTAAWLLGWRCVAVLSGLRPMANWARTALRLI 137

Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR------VVVLI 394
              +   W  ++       A      +         +           R      V+   
Sbjct: 138 IPAIFGAWILIIWEAVTRGAGIPFILLPPPSAIGARIAGSLPTLGADVRQTIFKAVIFGY 197

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
           ++ S       I     P +   + P   +++A P     P++V    +   +     + 
Sbjct: 198 VVGSGAGFITAILADRVPFLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSK----AA 253

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++I  T + +L N +AG +A  +  +++  ++    W     + LP   P+         
Sbjct: 254 VVIIMTFFPMLVNTVAGLAASGHMERDLMRTYASGYWPTLIKLRLPAAAPFIFNALKINS 313

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             A   +IV+E            G+G  I+    + +   V   + +        
Sbjct: 314 TLALIGAIVAEFFG-----TPVVGMGFRISTEVGRMNIDMVWAEIAVAALAGSVF 363



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R I P IF     ++   +             P  I   +  +L   +L     +T  + 
Sbjct: 135 RLIIPAIFGAWILIIWEAVTRGAGIPFILLPPPSAIGARIAGSLP--TLGADVRQTIFKA 192

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   V+     F+ A LA +   L   L+PI +++ ++PI+G     V++F   +  K 
Sbjct: 193 VIFGYVVGSGAGFITAILADRVPFLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSKA 252

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++    W     L +P + P 
Sbjct: 253 A--------VVIIMTFFPMLVNTVAGLAASGHMERDLMRTYASGYWPTLIKLRLPAAAPF 304

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTM 248
           +   + ++ +      + +E         P+ G+G  I+  +   ++    A +      
Sbjct: 305 IFNALKINSTLALIGAIVAEFFGT-----PVVGMGFRISTEVGRMNIDMVWAEIAVAALA 359

Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271
             V +    L+ R +  W    R
Sbjct: 360 GSVFYGVVALVERAVTFWHPSVR 382


>gi|163839892|ref|YP_001624297.1| glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162953368|gb|ABY22883.1| Glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 234

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 75/173 (43%), Gaps = 12/173 (6%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +V  ++ T   A LA KS     +++P+  ++ +IP L  L   +  F+ L     I   
Sbjct: 26  LVFGIIITIPLAQLAKKSGIARAIILPLGSLLFTIPSLALL-VVLPAFLRL----QILDP 80

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              I A+    V  +  +   +L +I  DL + + +      ++F+ + +P S+P L   
Sbjct: 81  ANVIVALTIYAVALLVRTSLDALNSIDNDLRQAAVAMGYRPVRRFFTVDLPLSIPVLFSG 140

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           + +         V++  +V    +I +P +G+     +   ++  +L  ++ +
Sbjct: 141 LRV-------VSVSNISLVSVGALIGVPSLGTLFTDGLTSDNVSEVLTGIVMI 186



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 8/190 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             +V  ++    + +++ V+ ++   II IP+           + I P   LL   P+  
Sbjct: 5   LNNVDLILTSTALHIYQSVLPLVFGIIITIPLAQLAKKSGIARAIILPLGSLLFTIPSLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              ++ + +    L+P   +  L I+     +  + +   ++  ND ++ A +      R
Sbjct: 65  LLVVLPAFLRLQILDPANVIVALTIYAVALLVRTS-LDALNSIDNDLRQAAVAMGYRPVR 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P   +G         +   V  +            LG    +     + 
Sbjct: 124 RFFTVDLPLSIPVLFSGLRVVSVSNISLVSVGALIG-------VPSLGTLFTDGLTSDNV 176

Query: 553 PEVVLGVLIM 562
            EV+ G++++
Sbjct: 177 SEVLTGIVMI 186


>gi|160935645|ref|ZP_02083020.1| hypothetical protein CLOBOL_00535 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441389|gb|EDP19099.1| hypothetical protein CLOBOL_00535 [Clostridium bolteae ATCC
           BAA-613]
          Length = 221

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
              ++ L +    T   +  +  +S +           + R           VL  I+++
Sbjct: 5   ATTINMLVKGIWETIYMVFLSSALSYVIGIPLGIALVVTDREGISPVPLFNKVLGLIINL 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   V+       GK IG+  A +  +  +    +   +  SL  +   + 
Sbjct: 65  LRSVP-FIILLIMVLPITKFIVGKTIGSN-ATVVPLIIAAAPYIGRMVESSLKEVDAGVI 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           E ++S   S WQ    + +P + P L+    +S+
Sbjct: 123 EAAKSMGASTWQIIVKVLLPEAKPSLLVGAAISV 156



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 12/150 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +   ++ +I IP+GI         I   P  +  +     LL + P  +   +V
Sbjct: 18  TIYMVFLSSALSYVIGIPLGIALVVTDREGISPVPLFNKVLGLIINLLRSVPFIILLIMV 77

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    +  N  +  L+I     YI   V +          E A S   + W+  
Sbjct: 78  LPITKFIVGKTIGSNATVVPLII-AAAPYIGRMVESSLKEVDAGVIEAAKSMGASTWQII 136

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
             ++LP   P  + GA  +       S ++
Sbjct: 137 VKVLLPEAKPSLLVGAAISVTTILGYSAMA 166


>gi|315304714|ref|ZP_07874909.1| phosphate ABC transporter, permease protein PstC [Listeria ivanovii
           FSL F6-596]
 gi|313626915|gb|EFR95853.1| phosphate ABC transporter, permease protein PstC [Listeria ivanovii
           FSL F6-596]
          Length = 316

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    VL P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|239622445|ref|ZP_04665476.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239514442|gb|EEQ54309.1| ABC transporter permease protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 324

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 81  FTSTFGLGFGKTFALFDNIATVFTYQDGIFGRWF-VNTILYVVVGAGGATLLAIMGGYAL 139

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K+     + A + P            +   L    W  ++    + + +   
Sbjct: 140 AKFRFPGRKLCFVIIIGAISVPGIALAVPQFLLFAKMGLTNTPWSMIIPSLVSTFGLYLM 199

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P++  E A       +R +  I LP + P  VT A+ A    W N  +   +
Sbjct: 200 WIFSDQAVPDELLEAARVDGAGEFRTFFQISLPLLAPGIVTTALFAIVATWNNYFLPLIM 259

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 260 LKDSNWYPLTIGLNQWKDQASTAG 283



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R  G  L  ++ I   S+P +       +
Sbjct: 112 RWFVNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKLCFVIIIGAISVPGIALAVPQFL 171

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           ++        + +      S   +P +L E +R      ++ F+
Sbjct: 172 LFAKMGLTNTP----WSMIIPSLVSTFGLYLMWIFSDQAVPDELLEAARVDGAGEFRTFF 227

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 228 QISLPLLAPGIVTTALFAIVATWN 251


>gi|150018366|ref|YP_001310620.1| glycine/betaine ABC transporter [Clostridium beijerinckii NCIMB
           8052]
 gi|149904831|gb|ABR35664.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 216

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 76/200 (38%), Gaps = 12/200 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           D+++  Q   +     L +++++ +    +  L+ K++     +    + ++ +P L  L
Sbjct: 12  DMNNYLQAIGQHLEISLLSLLVAAIIGIPFGILSTKNKVWYRWVTTSFNTLRIVPSLAVL 71

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +                 A+ A+    +  +  +   +   IP  + E S +  +S 
Sbjct: 72  IMFIPIVGTGV--------KPALIALALLGIPPILLNTALAFNTIPEFMIETSMAMGMSK 123

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMS-GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q FW + VP + P ++  +  +M        +A+ +   G   I   G+G         
Sbjct: 124 AQSFWKVKVPLAAPLMLTGIKTAMVEIIASATLAAYIGGGGVGNIIFTGLG---LNRADL 180

Query: 236 QDLLAILYAMLTMLGVIFLY 255
             +  +  A+L+ML  + + 
Sbjct: 181 LLIGGVTVAILSMLANVIML 200



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 8/180 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ +++A+II IP GI           +      L   P+     + +  V        +
Sbjct: 28  LLSLLVAAIIGIPFGILSTKNKVWYRWVTTSFNTLRIVPSLAVLIMFIPIVGTGVKPALI 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+LL I      IL N     +  P    E + +  ++  + +  + +P   P  +TG 
Sbjct: 88  ALALLGIP----PILLNTALAFNTIPEFMIETSMAMGMSKAQSFWKVKVPLAAPLMLTGI 143

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            TA      +A++ + +   G  ++  TGLG       +      V + +L M   V+ L
Sbjct: 144 KTAMVEIIASATLAAYIGGGGVGNIIFTGLG---LNRADLLLIGGVTVAILSMLANVIML 200


>gi|323465887|gb|ADX69574.1| Phosphate ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 331

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 63/154 (40%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  ++S L    +A   A       S++    L  + +++  IP + +    LT  +  
Sbjct: 116 FAVTLLSALVATPFAVAIALYMTEYSSKKGASFLQSVTELLVGIPSVVYGFLGLTIIIPV 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L+ G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  + 
Sbjct: 176 IRTLFGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGATHWQTIYR 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 74/236 (31%), Gaps = 25/236 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA------------WQSIGYIVNHF 371
           +   P    +     +    L I    V+    IG                   ++ +  
Sbjct: 37  KLTKPSKETRQEYWGKGLTYLAIGLIIVLVVSIIGFVGYHGLETFIDNHVNVFHFLTSTD 96

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLL 425
                        + +     + ++++++  P  + I            +S +Q   +LL
Sbjct: 97  WDPGEEKNHVGAAVMIVTSFAVTLLSALVATPFAVAIALYMTEYSSKKGASFLQSVTELL 156

Query: 426 AAFPANVF------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPND 478
              P+ V+        + V    +      +  + L++F      + +  +    A P+ 
Sbjct: 157 VGIPSVVYGFLGLTIIIPVIRTLFGGTGFGILAATLVLFVMVLPTITSLTVDSLKAVPSH 216

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           F++ + +   T W+    ++L    P  +T  I     A+  ++  ++     + +
Sbjct: 217 FRKASMALGATHWQTIYRVVLRVATPRILTAVIFGMARAFGEALAVQMVIGNAVLM 272


>gi|166031596|ref|ZP_02234425.1| hypothetical protein DORFOR_01296 [Dorea formicigenerans ATCC
           27755]
 gi|166028573|gb|EDR47330.1| hypothetical protein DORFOR_01296 [Dorea formicigenerans ATCC
           27755]
          Length = 300

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 74  SAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++I+  F    A    +   +       PI++I   IP + +    LT  +     L+
Sbjct: 87  LALLIATPFALGSAIFMIEIAPKFGEKFYRPIVEIFAGIPSVVYGWVGLTVLIPAIKKLF 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +       ++     S+ ++P+D    +     + WQ  + + +P 
Sbjct: 147 GLQVGHSILAAGIVLALMIFPTISNVAADSISSVPKDYRMAAYGLGSTRWQSIYKVVLPA 206

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           +  G++  +++ ++  +   +A  M+ +G T     GI
Sbjct: 207 AGSGILSGIILGLARAFGEALAVAMV-IGQTTALPTGI 243



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 17/164 (10%)

Query: 391 VVLIIIASIIWIP--VGIWIGFR----PHISSKIQPFAQLLAAFPANVF--------FPL 436
           +    +A +I  P  +G  I              +P  ++ A  P+ V+         P 
Sbjct: 82  LCTCGLALLIATPFALGSAIFMIEIAPKFGEKFYRPIVEIFAGIPSVVYGWVGLTVLIPA 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWR 495
           +         +  L   +++     +  + NV A   S+ P D++  A     T W+   
Sbjct: 142 IKKLFGLQVGHSILAAGIVLAL-MIFPTISNVAADSISSVPKDYRMAAYGLGSTRWQSIY 200

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            ++LP      ++G I     A+  ++   +   G      TG+
Sbjct: 201 KVVLPAAGSGILSGIILGLARAFGEALAVAMV-IGQTTALPTGI 243


>gi|328887015|emb|CCA60254.1| Glycine betaine ABC transport system permease protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 224

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 54/140 (38%), Gaps = 6/140 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +    +      +  ++IS       A +     + G + V + ++ +++P    L   
Sbjct: 22  GIWHRLAEHLFLTVVCLLISCAIALPVALVLGHLGKGGALAVNLSNVGRAVPTFAVLVLL 81

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++  +  Y       E   I A+    V  +  + Y  +  +  D+   +R   ++G Q 
Sbjct: 82  LLSPIGSYG------EWPTIIALVLFAVPPLLTNAYVGMRGVDPDVVRAARGMGMTGRQT 135

Query: 180 FWYLGVPFSMPGLVWNMMMS 199
              + +P ++P ++  + ++
Sbjct: 136 LTRVELPLALPLILTGVRIA 155



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 9/211 (4%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++     +     +       +F  VV ++I+  I +PV + +G      +     +
Sbjct: 7   AWSWLTTSAHWAGENGIWHRLAEHLFLTVVCLLISCAIALPVALVLGHLGKGGALAVNLS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      LV+  +S           + ++      +L N   G      D    
Sbjct: 67  NVGRAVPTFAV--LVLLLLSPIGSYGEWPTIIALVLFAVPPLLTNAYVGMRGVDPDVVRA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A    +TG +    + LP   P  +TG   A        +     +         GLG  
Sbjct: 125 ARGMGMTGRQTLTRVELPLALPLILTGVRIAA-------VQLVATATVAALAGGGGLGRI 177

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I       S P+VV G  ++    L +    
Sbjct: 178 ITAGFNLASTPQVVAGACLVAVLALLVEGVF 208


>gi|217978292|ref|YP_002362439.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
 gi|217503668|gb|ACK51077.1| binding-protein-dependent transport systems inner membrane
           component [Methylocella silvestris BL2]
          Length = 389

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY---- 122
           R    + +++ I+L  +     LA +      +L   L ++Q+IP +      +      
Sbjct: 185 RHAALVGASVAIALAVSIPLTALALRQAHWRGLLFSTLGVVQTIPSIALFGVLIAPLAAL 244

Query: 123 ---FMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
              F  L    V G   A AI A+    +  +          +  D+++ +R       +
Sbjct: 245 AARFPLLGAWGVGGTGAAPAIIALTLYSLGPLVRIFVTGFNEVSADVKDAARGIGFDRRR 304

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F+ +  P ++P L+  + +         + +  +     +I   G+G ++   I +  L
Sbjct: 305 LFFAVEFPLALPALISGLRV-------VAIQAIGLAAVAALIGAGGLGVFVFQGIGQYAL 357

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +L   + ++ +    D + 
Sbjct: 358 DLVLLGAIPIILMALAADLVF 378



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 25/196 (12%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF--------------P 435
           V   + IA  + IP+      + H    +     ++   P+   F              P
Sbjct: 190 VGASVAIALAVSIPLTALALRQAHWRGLLFSTLGVVQTIPSIALFGVLIAPLAALAARFP 249

Query: 436 LVVSC-VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           L+ +  V      P +    L   G    I    + G +    D K+ A        R +
Sbjct: 250 LLGAWGVGGTGAAPAIIALTLYSLGPLVRIF---VTGFNEVSADVKDAARGIGFDRRRLF 306

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +  P   P  ++G       A   + V+ +   G       GLG ++ +   + +   
Sbjct: 307 FAVEFPLALPALISGLRVVAIQAIGLAAVAALIGAG-------GLGVFVFQGIGQYALDL 359

Query: 555 VVLGVLIMCCFVLALN 570
           V+LG + +    LA +
Sbjct: 360 VLLGAIPIILMALAAD 375


>gi|62180748|ref|YP_217165.1| putative ABC-type proline/glycine betaine transport systems,
           permease component [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128381|gb|AAX66084.1| putative ABC-type proline/glycine betaine transport systems,
           permease component [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715223|gb|EFZ06794.1| hypothetical protein SCA50_2325 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 243

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + ++           +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVGVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  SM         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSMIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 15/187 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHL 446
           +V I     + + VG  I        + +P  + +AA    FP      + V  + +   
Sbjct: 56  LVGISSLFAVGVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQQ 115

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      IL   +AG  A P     VAS   ++  +    + LP   P  
Sbjct: 116 PAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQVELPLAAPVI 171

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  T+       + ++         +  + LG  I       +   V+ G L++    
Sbjct: 172 LAGIRTSMIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAA 224

Query: 567 LALNRFL 573
           + ++R  
Sbjct: 225 IIIDRLF 231


>gi|308174287|ref|YP_003920992.1| phosphate ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607151|emb|CBI43522.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
 gi|328554233|gb|AEB24725.1| phosphate ABC transporter [Bacillus amyloliquefaciens TA208]
 gi|328912630|gb|AEB64226.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens
           LL3]
          Length = 294

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A +L    + IL+HG+ E T+         I      +      +   +   M+I++ 
Sbjct: 20  VIAAILAGLFLYILIHGVSEITLHFLTSKSSAIA-SGGGIRDQLFNSFYILFITMLITIP 78

Query: 82  FTFVYATLAAKSRRLGMV---LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+      V   +   ++++ S+P +    F ++ F+NL          A 
Sbjct: 79  LGVGGGVFMAEYAPQNKVTDFIRTCIEVLSSLPSIVIGMFGMLMFVNLTGWGYTIIGGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   V  M      +L  +P++L+E S +  +S W     + +P ++P ++   ++
Sbjct: 139 ALTVFNLPV--MVRVTEGALTAVPKELKEASLALGVSRWYTVKTVLIPSAIPSILTGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G T   L
Sbjct: 197 A-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 21/189 (11%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPV 404
               ++ G+ + I    +  I  HF       +   G I   +F    ++ I  +I IP+
Sbjct: 20  VIAAILAGLFLYILIHGVSEITLHFLTSKSSAIASGGGIRDQLFNSFYILFITMLITIPL 79

Query: 405 GIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           G+  G        +  ++  I+   ++L++ P+     +V+                 +I
Sbjct: 80  GVGGGVFMAEYAPQNKVTDFIRTCIEVLSSLPS-----IVIGMFGMLMFVNLTGWGYTII 134

Query: 458 FGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            G     +FN            +A P + KE + +  ++ W   + +++P   P  +TGA
Sbjct: 135 GGALALTVFNLPVMVRVTEGALTAVPKELKEASLALGVSRWYTVKTVLIPSAIPSILTGA 194

Query: 511 ITACGGAWN 519
           I A G  + 
Sbjct: 195 ILASGRVFG 203


>gi|116873862|ref|YP_850643.1| phosphate ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742740|emb|CAK21864.1| phosphate ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|313631988|gb|EFR99106.1| phosphate ABC transporter, permease protein PstC [Listeria
           seeligeri FSL N1-067]
 gi|313636359|gb|EFS02141.1| phosphate ABC transporter, permease protein PstC [Listeria
           seeligeri FSL S4-171]
          Length = 316

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    VL P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|23464863|ref|NP_695466.1| sugar transport system permease protein [Bifidobacterium longum
           NCC2705]
 gi|189439869|ref|YP_001954950.1| MalG-type ABC sugar transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|296453580|ref|YP_003660723.1| sugar transport system permease [Bifidobacterium longum subsp.
           longum JDM301]
 gi|312133285|ref|YP_004000624.1| malg-type abc sugar transport system permease component
           [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688539|ref|YP_004208273.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|23325450|gb|AAN24102.1| sugar transport system permease protein [Bifidobacterium longum
           NCC2705]
 gi|189428304|gb|ACD98452.1| MalG-type ABC sugar transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|296183011|gb|ADG99892.1| sugar transport system permease protein [Bifidobacterium longum
           subsp. longum JDM301]
 gi|311772496|gb|ADQ01984.1| MalG-type ABC sugar transport system permease component
           [Bifidobacterium longum subsp. longum BBMN68]
 gi|320459875|dbj|BAJ70495.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 335

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 92  FTSTFGLGFGKTFALFDNIATVFTYQDGIFGRWF-VNTILYVVVGAGGATLLAIMGGYAL 150

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K+     + A + P            +   L    W  ++    + + +   
Sbjct: 151 AKFRFPGRKLCFVIIIGAISVPGIALAVPQFLLFAKMGLTNTPWSMIIPSLVSTFGLYLM 210

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P++  E A       +R +  I LP + P  VT A+ A    W N  +   +
Sbjct: 211 WIFSDQAVPDELLEAARVDGAGEFRTFFQISLPLLAPGIVTTALFAIVATWNNYFLPLIM 270

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 271 LKDSNWYPLTIGLNQWKDQASTAG 294



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R  G  L  ++ I   S+P +       +
Sbjct: 123 RWFVNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKLCFVIIIGAISVPGIALAVPQFL 182

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           ++        + +      S   +P +L E +R      ++ F+
Sbjct: 183 LFAKMGLTNTP----WSMIIPSLVSTFGLYLMWIFSDQAVPDELLEAARVDGAGEFRTFF 238

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 239 QISLPLLAPGIVTTALFAIVATWN 262


>gi|304440642|ref|ZP_07400526.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370829|gb|EFM24451.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 302

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 77  VISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
            ++LLF   +A +++        +     L P ++I  +IP + +    L   V +  NL
Sbjct: 88  GLALLFATPFAAISSIFITEVSPKLGEKFLRPTIEIFVAIPSIVYGWTGLVVLVPFIRNL 147

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           +          A   +       +   M  SL  +P+  ++ S +   + WQ  + + VP
Sbjct: 148 FNLSYGNNIFTAAIVLSVMIFPTIASVMIDSLKGVPKAYKDASYALGTTRWQMIYKVLVP 207

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
               G++  +++ ++      +A  M++     +P
Sbjct: 208 AGKSGMITGIILGLTRAMGEALAVSMVIGKTRNVP 242



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 47/131 (35%), Gaps = 8/131 (6%)

Query: 415 SSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
              ++P  ++  A P+ V+         P + +  +  + N     ++++       I  
Sbjct: 114 EKFLRPTIEIFVAIPSIVYGWTGLVVLVPFIRNLFNLSYGNNIFTAAIVLSVMIFPTIAS 173

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            +I      P  +K+ + +   T W+    +++P      +TG I     A   ++   +
Sbjct: 174 VMIDSLKGVPKAYKDASYALGTTRWQMIYKVLVPAGKSGMITGIILGLTRAMGEALAVSM 233

Query: 527 ASWGHIHLRTT 537
                 ++  +
Sbjct: 234 VIGKTRNVPKS 244


>gi|238854589|ref|ZP_04644922.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 269-3]
 gi|260664264|ref|ZP_05865117.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932124|ref|ZP_06337580.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 208-1]
 gi|238832774|gb|EEQ25078.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 269-3]
 gi|260562150|gb|EEX28119.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           SJ-7A-US]
 gi|281303748|gb|EFA95894.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 208-1]
          Length = 299

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 20/226 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           P      +LP   +   + +L+ ++ +        A      +  G +L PI++++  +P
Sbjct: 70  PSHNSFGALPMIVTSFVVTLLAGLIAAPFALIIALAINEIFPKWFGKILQPIIELLVGVP 129

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L        +++ G   G  LAA+  +F   +  M   M  SL   P+    
Sbjct: 130 SVVYGFAGLILVTPVLRSIFGGSGFGI-LAAVVVLFMMILPTMVSMMVDSLRATPKTFRT 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD---------- 217
            S     + WQ    + +P +  GL+  ++  M+  +   +A +M++             
Sbjct: 189 ASYGLGATRWQTLHMVVIPSAKGGLLTAIVFGMTRAFGEALAVQMVIGNAALMPQNLMSP 248

Query: 218 ----TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               T +   G+G+ I        L ++ + +L M  V  +  +L+
Sbjct: 249 AATLTSVLTTGMGNTIMGTSANDALWSLAFVLLVMSLVFNILIKLI 294



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 89/258 (34%), Gaps = 27/258 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +F    G+A+     +  +     +  +  +  +     +    V+ ++A +I  
Sbjct: 37  VISIIFFLTGKGLALFFKDHANVWQFLTSSNWEPSHNSFGALPMIVTSFVVTLLAGLIAA 96

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNL 450
           P  + I               +QP  +LL   P+ V+      LV   +   +      +
Sbjct: 97  PFALIIALAINEIFPKWFGKILQPIIELLVGVPSVVYGFAGLILVTPVLRSIFGGSGFGI 156

Query: 451 WLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +++++F      +   ++    A P  F+  +     T W+    +++P      +T 
Sbjct: 157 LAAVVVLFMMILPTMVSMMVDSLRATPKTFRTASYGLGATRWQTLHMVVIPSAKGGLLTA 216

Query: 510 AITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAYIAESTEKGSFPEV 555
            +     A+  ++  ++                     + TTG+G  I  ++   +   +
Sbjct: 217 IVFGMTRAFGEALAVQMVIGNAALMPQNLMSPAATLTSVLTTGMGNTIMGTSANDALWSL 276

Query: 556 VLGVLIMCCFVLALNRFL 573
              +L+M      L + +
Sbjct: 277 AFVLLVMSLVFNILIKLI 294


>gi|46190783|ref|ZP_00121104.2| COG0395: ABC-type sugar transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|290769769|gb|ADD61544.1| putative protein [uncultured organism]
 gi|291517355|emb|CBK70971.1| carbohydrate ABC transporter membrane protein 2, CUT1 family (TC
           3.A.1.1.-) [Bifidobacterium longum subsp. longum F8]
          Length = 324

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 81  FTSTFGLGFGKTFALFDNIATVFTYQDGIFGRWF-VNTILYVVVGAGGATLLAIMGGYAL 139

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   K+     + A + P            +   L    W  ++    + + +   
Sbjct: 140 AKFRFPGRKLCFVIIIGAISVPGIALAVPQFLLFAKMGLTNTPWSMIIPSLVSTFGLYLM 199

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P++  E A       +R +  I LP + P  VT A+ A    W N  +   +
Sbjct: 200 WIFSDQAVPDELLEAARVDGAGEFRTFFQISLPLLAPGIVTTALFAIVATWNNYFLPLIM 259

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 260 LKDSNWYPLTIGLNQWKDQASTAG 283



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R  G  L  ++ I   S+P +       +
Sbjct: 112 RWFVNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKLCFVIIIGAISVPGIALAVPQFL 171

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           ++        + +      S   +P +L E +R      ++ F+
Sbjct: 172 LFAKMGLTNTP----WSMIIPSLVSTFGLYLMWIFSDQAVPDELLEAARVDGAGEFRTFF 227

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 228 QISLPLLAPGIVTTALFAIVATWN 251


>gi|304389762|ref|ZP_07371721.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326938|gb|EFL94177.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 356

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 70/181 (38%), Gaps = 7/181 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMVISLL 81
            F  + G   +L+  +    V R ++   P+  +     +      T   +  ++++S+ 
Sbjct: 32  VFGAIGGFFLMLIVALAAYIVFRGLLSFDPVFLSFTRDGIMNQVFNTVYLVFLSLIVSVA 91

Query: 82  FTFVYATLAAKSRRLGM---VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+          +   ++ + S+P +    F  + F+ +   +     LA 
Sbjct: 92  LGVPAGIYMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNL--LAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A+    +  +T S   +L  +P DL+  S +   + W     + +P ++P L+  +++
Sbjct: 150 ALAVSILNLPLVTTSTESALRALPADLKYGSAALGATRWTTIVRVQLPAALPHLMTGVVL 209

Query: 199 S 199
           +
Sbjct: 210 A 210



 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 69/173 (39%), Gaps = 5/173 (2%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F+  ++  +A  I ++ +      F       ++     T++ V + +I++  + +P GI
Sbjct: 39  FFLMLIVALAAYIVFRGLLSFDPVFLSFTRDGIMNQVFNTVYLVFLSLIVSVALGVPAGI 98

Query: 407 WIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           ++         +  I+   + L++ P+ V   F  +V  +        L  +L +     
Sbjct: 99  YMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNLLAGALAVSILNL 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +  +  +   A P D K  +++   T W     + LP   P+ +TG + A 
Sbjct: 159 PLVTTSTESALRALPADLKYGSAALGATRWTTIVRVQLPAALPHLMTGVVLAA 211


>gi|303258016|ref|ZP_07344025.1| phosphate ABC transporter, permease protein PstC [Burkholderiales
           bacterium 1_1_47]
 gi|330999431|ref|ZP_08323145.1| phosphate ABC transporter, permease protein PstC [Parasutterella
           excrementihominis YIT 11859]
 gi|302859359|gb|EFL82441.1| phosphate ABC transporter, permease protein PstC [Burkholderiales
           bacterium 1_1_47]
 gi|329574857|gb|EGG56416.1| phosphate ABC transporter, permease protein PstC [Parasutterella
           excrementihominis YIT 11859]
          Length = 293

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 14/199 (7%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I WF    G+ +        ++  H  Y       +     +   V + ++A+++ IP+G
Sbjct: 28  IVWFLFKEGMPVLDTISLKHFLTGHDWYPTEDPPSFGIFPLIIGSVSVTLLAAVLAIPLG 87

Query: 406 IWIGF------RPHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLW 451
           I             + S  +PF +LLAA P+ V          P +            L 
Sbjct: 88  ILCAIFLSEIASSRLRSIFKPFIELLAAMPSVVIGFVGMTVLAPFLQDYFGAPTGLNILN 147

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            ++L+       I         + P   KE + +   T W     + +P  F    TG +
Sbjct: 148 AAILLALMAVPTICTISEDALRSVPRSLKESSLALGATHWETLTTVTIPAAFSGIATGVM 207

Query: 512 TACGGAWNASIVSEVASWG 530
                    ++V  + + G
Sbjct: 208 LGLSRVIGETMVVLMVAGG 226



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 68/159 (42%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--Y 122
           +S  +++ +       L A       S RL  +  P ++++ ++P  ++GF+  TV+  +
Sbjct: 73  VSVTLLAAVLAIPLGILCAIFLSEIASSRLRSIFKPFIELLAAMPSVVIGFVGMTVLAPF 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             + +        L A   +    V  +      +L ++PR L+E S +   + W+    
Sbjct: 133 LQDYFGAPTGLNILNAAILLALMAVPTICTISEDALRSVPRSLKESSLALGATHWETLTT 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + +P +  G+   +M+ +S      +   M+  G  +IP
Sbjct: 193 VTIPAAFSGIATGVMLGLSRVIGETMVVLMVAGGAALIP 231


>gi|254388625|ref|ZP_05003858.1| choline transport system permease protein opuBB [Streptomyces
           clavuligerus ATCC 27064]
 gi|326441654|ref|ZP_08216388.1| putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197702345|gb|EDY48157.1| choline transport system permease protein opuBB [Streptomyces
           clavuligerus ATCC 27064]
          Length = 236

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
           D +    +      L            ++++I LL  F  A LA         ++ +  +
Sbjct: 19  DWICGEYLRTRAQELTDATVEHIWITGTSVLIGLLVAFPLALLARSRPAFAGPVLGLTTL 78

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + +IP L           +L    +  +    +  +    +  +  ++   L  +P +  
Sbjct: 79  LYTIPSLAMF--------SLLLPLLGLSAALVVTGLVLYSLTILVRNILAGLAAVPEEAR 130

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +R       +  W + +P ++P L+  + M+        V++  +     +I   G+G
Sbjct: 131 EAARGLGYGPARLLWEVELPLALPALMAGVRMA-------TVSTVALTTVGALIGRGGLG 183

Query: 227 SYIALAIKEQDLLAILYAML 246
             I   ++      +L A +
Sbjct: 184 DLIDDGVQTTFKAQVLAASV 203



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     ++I  ++  P+ +    RP  +  +     LL   P+   F L++  +     
Sbjct: 41  IWITGTSVLIGLLVAFPLALLARSRPAFAGPVLGLTTLLYTIPSLAMFSLLLPLLGLSAA 100

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                L L  +      ++ N++AG +A P + +E A        R    + LP   P  
Sbjct: 101 LVVTGLVLYSLTI----LVRNILAGLAAVPEEAREAARGLGYGPARLLWEVELPLALPAL 156

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + G   A       + V  +   G       GLG  I +  +     +V+   ++
Sbjct: 157 MAGVRMATVSTVALTTVGALIGRG-------GLGDLIDDGVQTTFKAQVLAASVL 204


>gi|145594182|ref|YP_001158479.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
 gi|145303519|gb|ABP54101.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora tropica CNB-440]
          Length = 242

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 63/203 (31%), Gaps = 19/203 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L          +L ++ ++ +   + A    ++ R   +       M +IP    L   +
Sbjct: 14  LVAQTLEHATIVLMSVALATVIGVLIALWTYRNPRARAIATGTAAAMLTIPSFALLGLLI 73

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                 Y           + A+    +  +  +    L  I   L E +R   +S  +  
Sbjct: 74  APLGLGY--------APTLVALTMYALLPILRNTIVGLTEIDPALTEAARGIGMSRLRSL 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE----Q 236
             + +P S P ++  + +S             I      +  PG+G+ I   +       
Sbjct: 126 ATVEIPLSWPVILTGIRVSTQMTM-------GIAAIGAYVGGPGLGNQIFSGLSNLGGVN 178

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            L   L   + ++ +    D  L
Sbjct: 179 SLNQALVGTVGVIVLALTVDLAL 201



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ + +A++I + + +W    P   +     A  +   P+     L+++ +   +    
Sbjct: 25  VLMSVALATVIGVLIALWTYRNPRARAIATGTAAAMLTIPSFALLGLLIAPLGLGYAPTL 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L++  +      IL N I G +       E A    ++  R    + +P  +P  +TG
Sbjct: 85  VALTMYALL----PILRNTIVGLTEIDPALTEAARGIGMSRLRSLATVEIPLSWPVILTG 140

Query: 510 AITACGGAWNASIVSEVASW 529
              +       + +      
Sbjct: 141 IRVSTQMTMGIAAIGAYVGG 160


>gi|311069100|ref|YP_003974023.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869617|gb|ADP33092.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942]
          Length = 309

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  V+S L         A             VL P+++++  IP + +    LT  V +
Sbjct: 93  FAVTVLSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                      + LA    +    +  +T     ++ ++P+ L E S +   + WQ    
Sbjct: 153 IAAFKTSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP + P L+  +++ M+  +   +A +M++    ++P
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRILP 251



 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
             + +++++I  P+GI                 +QP  +LL   P+ V+         P 
Sbjct: 93  FAVTVLSALIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPF 152

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           + +  +    +  L  ++++       I        ++ P   +E + +   T W+  R 
Sbjct: 153 IAAFKTSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRK 212

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--------------GAY 542
           +++P  FP  +T  +     A+  ++  ++       L  + L              G  
Sbjct: 213 VLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRILPESLLDTAGTLTTIITLNMGHT 272

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S E  +   + L +L+M    + L R+L
Sbjct: 273 TYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|83954415|ref|ZP_00963135.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
 gi|83841452|gb|EAP80622.1| ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1]
          Length = 244

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  +    L A+ +++  T               +   I +I Q+ P +  L   V    
Sbjct: 58  ALASVAATLVAVTLAIFVTRPVGA------SFLPLSRTITNIGQTFPPVAVLALAVPALG 111

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         + A+F   +  +  +   +L  +P    E +R   L+ WQ+ W + 
Sbjct: 112 FGAGP--------TLVALFLYGLLPIFENAITALSTLPPATMEAARGMGLNRWQRLWRVE 163

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       VV +       + +    +G  I   +   +   +L  
Sbjct: 164 LPLALPVILTGIRLS-------VVIALGTATIGSTVAARTLGEVIIAGLLTNNTAYVLQG 216

Query: 245 MLTMLGVIFLYDQLLFR 261
            L +     L    + +
Sbjct: 217 GLIVGLFAVLIYDAMAQ 233



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 17/184 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQP----FAQLLAAFPANVFFPLVVSCVSYYH 445
           V +  + A+++ + + I++     + +   P       +   FP      L V  + +  
Sbjct: 57  VALASVAATLVAVTLAIFV--TRPVGASFLPLSRTITNIGQTFPPVAVLALAVPALGFGA 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + L L  +      I  N I   S  P    E A    +  W+    + LP   P 
Sbjct: 115 GPTLVALFLYGLL----PIFENAITALSTLPPATMEAARGMGLNRWQRLWRVELPLALPV 170

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   +   A   + +          +    LG  I       +   V+ G LI+  F
Sbjct: 171 ILTGIRLSVVIALGTATIG-------STVAARTLGEVIIAGLLTNNTAYVLQGGLIVGLF 223

Query: 566 VLAL 569
            + +
Sbjct: 224 AVLI 227


>gi|172056898|ref|YP_001813358.1| phosphate ABC transporter, inner membrane subunit PstC
           [Exiguobacterium sibiricum 255-15]
 gi|171989419|gb|ACB60341.1| phosphate ABC transporter, inner membrane subunit PstC
           [Exiguobacterium sibiricum 255-15]
          Length = 313

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 115/285 (40%), Gaps = 24/285 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSL---PQYASR- 67
           RI P +  L AFV V+  I I+L  + ET    ++V       +   + L   P+Y    
Sbjct: 29  RIMPIVLFLCAFVSVVTTIGIILTLVIETEHFFEVVSFKEFFGSTSWYPLNSQPEYGIWP 88

Query: 68  ----TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LT 117
               T    + AM++++      A   ++  S R   VL PIL+++  +P + F    LT
Sbjct: 89  LVVGTLEITVIAMLVAVPIGLTSAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALT 148

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F     + L PG  I   L+    +    +  +      ++ ++P+ + + + +   +  
Sbjct: 149 FVTPLLVKLIPGLAIYNALSPGIVVGIMIIPMIASISEDAMSSVPKKIRDGALALGSTRL 208

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIA 230
           +    + VP ++ G++ ++++ MS      +   +    +    +  +          + 
Sbjct: 209 EVALKVVVPAALSGIIASIVLGMSRAIGETMIVTIAGGSNPTAAVNPLEPVQTMTAYIVQ 268

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           +A+ +     I Y  +  +G +     LL   +  W + +FR E 
Sbjct: 269 VALGDAGYGTIEYYSIYAVGTLLFVFTLLMNLLANWITRRFREEY 313



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 69/215 (32%), Gaps = 23/215 (10%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA ++ +P+G+                 ++P  ++LA  P  VF         PL+V 
Sbjct: 97  TVIAMLVAVPIGLTSAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALTFVTPLLVK 156

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +    +   L   +++       I        S+ P   ++ A +   T       +++
Sbjct: 157 LIPGLAIYNALSPGIVVGIMIIPMIASISEDAMSSVPKKIRDGALALGSTRLEVALKVVV 216

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL------GAYIAEST--EKGS 551
           P      +   +     A   +++  +A   +       L       AYI +    + G 
Sbjct: 217 PAALSGIIASIVLGMSRAIGETMIVTIAGGSNPTAAVNPLEPVQTMTAYIVQVALGDAGY 276

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  +  +   +      + + L  + TR  R
Sbjct: 277 GTIEYYSIYAVGTLLFVFTLLM-NLLANWITRRFR 310


>gi|222823803|ref|YP_002575377.1| phosphate ABC transporter permease [Campylobacter lari RM2100]
 gi|222539025|gb|ACM64126.1| phosphate ABC transporter, permease protein [Campylobacter lari
           RM2100]
          Length = 362

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  M +S+      A      A        +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMAVSIPIGVGAAIYLEEFAPQNVFTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKIQMIKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++   + IP+G+               +  I+     LA+ P+ +F  L
Sbjct: 140 FASVVGTLLVMLVCMAVSIPIGVGAAIYLEEFAPQNVFTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKIQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 IKGIMLPLAMPMILTGSILTLAGA 283


>gi|284049212|ref|YP_003399551.1| phosphate ABC transporter, inner membrane subunit PstA
           [Acidaminococcus fermentans DSM 20731]
 gi|283953433|gb|ADB48236.1| phosphate ABC transporter, inner membrane subunit PstA
           [Acidaminococcus fermentans DSM 20731]
          Length = 290

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 6/168 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFL 116
           SL      T   +  A+VIS L+        A+  R   L   +   ++ + S+P +   
Sbjct: 51  SLRDMFFNTLYLVFLALVISALWGIPAGIYLAEYARDGKLTNWVRMAVETLSSLPSIVVG 110

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F  + F+ +   +      A   +I T  +  M      +L ++P +    S     S 
Sbjct: 111 LFGYLVFIVMTGSQWNLMAGALSVSILTLPL--MVSVTENALKDLPPEYTLGSLGLGASK 168

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           WQ  W + +P  +P ++  ++++   G F   A+ M   G +     G
Sbjct: 169 WQTIWNVLLPACLPRIMTGLILAAGRG-FGEAAALMFTAGMSTDIDWG 215



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI---VNHFTYQDVLYVIWLGCITMFRV 390
           L   + +   + + +     G AI +    +  +   +   T   +L +  +   T++ V
Sbjct: 4   LAQKKAMDRFMSLLFTAGAAGSAILLFAFILDVVGQGLGALTADILLSLRDMFFNTLYLV 63

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANV--FFPLVVSCVSYYH 445
            + ++I+++  IP GI++                 + L++ P+ V   F  +V  V    
Sbjct: 64  FLALVISALWGIPAGIYLAEYARDGKLTNWVRMAVETLSSLPSIVVGLFGYLVFIVMTGS 123

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +  +L +   T   ++          P ++   +     + W+    ++LP   P 
Sbjct: 124 QWNLMAGALSVSILTLPLMVSVTENALKDLPPEYTLGSLGLGASKWQTIWNVLLPACLPR 183

Query: 506 YVTGAITACGGAWN 519
            +TG I A G  + 
Sbjct: 184 IMTGLILAAGRGFG 197


>gi|317047442|ref|YP_004115090.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316949059|gb|ADU68534.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 243

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 23/199 (11%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTVVYFMNLYPG 129
           SA  ++++     A  A  +RR G    P+L+ +    Q+ P +  L   V         
Sbjct: 59  SASALAVVVGVSCAVFA--TRRKGRAFRPLLETLAAAGQTFPPVAVLAIAVPVMG----- 111

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                   A+ A+F   +  +       L ++P    E++    +  W++ W + +  + 
Sbjct: 112 ---FGATPAVIALFLYGLLPILQGTLAGLDSVPSSNREIATGLGMGPWRRLWQIELALAA 168

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P ++  +  S+        A+    VG        +GS + + +   +   ++   L + 
Sbjct: 169 PVMMAGVRTSVMI--NIGTAAIASTVGAES-----LGSPVIIGLSGFNTAYVIQGALLVA 221

Query: 250 GVIFLYDQLLFR--PMIVW 266
            +  + D+LL R    + W
Sbjct: 222 LLALVCDRLLERVQRWLSW 240



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 14/152 (9%)

Query: 397 ASIIWIPVGI--WIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNL 450
           AS + + VG+   +          +P  + LAA    FP      + V  + +      +
Sbjct: 60  ASALAVVVGVSCAVFATRRKGRAFRPLLETLAAAGQTFPPVAVLAIAVPVMGFGATPAVI 119

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +      IL   +AG  + P+  +E+A+   +  WR    I L    P  + G 
Sbjct: 120 ALFLYGLL----PILQGTLAGLDSVPSSNREIATGLGMGPWRRLWQIELALAAPVMMAGV 175

Query: 511 ITA----CGGAWNASIVSEVASWGHIHLRTTG 538
            T+     G A  AS V   +    + +  +G
Sbjct: 176 RTSVMINIGTAAIASTVGAESLGSPVIIGLSG 207


>gi|170751272|ref|YP_001757532.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170657794|gb|ACB26849.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 398

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 9/193 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI---LGFLTFTVVYFMNLYPG 129
           L+++  + L     A LA     L   L+  L+++Q++P     G L   + +     PG
Sbjct: 195 LTSVAAAALIGIPAAALARPVPPLRAGLLTGLNVVQTVPSMALFGMLIAPLAWIGREVPG 254

Query: 130 KVIGAELA-----AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                        A  A+F   +  +  +    L  +P  + + +R   ++  Q+ + + 
Sbjct: 255 ASALGIAGIGAAPAFVALFAYALLPVAAATVAGLDAVPGPVRDAARGVGMTQRQRLFQVD 314

Query: 185 VPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           +P ++P ++  + + +       V+AS +   G  V    GI       +    L  +  
Sbjct: 315 LPLALPAILTGIRIVLVQNIGLAVIASLVGGGGLGVFVFQGISQNAGDLVLLGALPTVAL 374

Query: 244 AMLTMLGVIFLYD 256
           A    + +  + D
Sbjct: 375 ATGAAVLLDAVID 387



 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 13/193 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH----- 445
           +  +  A++I IP        P + + +     ++   P+   F ++++ +++       
Sbjct: 195 LTSVAAAALIGIPAAALARPVPPLRAGLLTGLNVVQTVPSMALFGMLIAPLAWIGREVPG 254

Query: 446 ------LNPNLWLSLLMIFG-TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        + + +F      +    +AG  A P   ++ A    +T  +    + 
Sbjct: 255 ASALGIAGIGAAPAFVALFAYALLPVAAATVAGLDAVPGPVRDAARGVGMTQRQRLFQVD 314

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           LP   P  +TG           A I S V   G       G+     +    G+ P V L
Sbjct: 315 LPLALPAILTGIRIVLVQNIGLAVIASLVGGGGLGVFVFQGISQNAGDLVLLGALPTVAL 374

Query: 558 GVLIMCCFVLALN 570
                      ++
Sbjct: 375 ATGAAVLLDAVID 387


>gi|238799050|ref|ZP_04642509.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           mollaretii ATCC 43969]
 gi|238717103|gb|EEQ08960.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           mollaretii ATCC 43969]
          Length = 232

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 69/187 (36%), Gaps = 17/187 (9%)

Query: 75  AMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + +I++L          +   +    V+  ++ + Q+ P +  L   V            
Sbjct: 39  SSIIAVLIGVGAGIAITRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMG-------- 90

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E  AI A+    +  +       + ++ R + EV++   +S  Q  W + +P + P +
Sbjct: 91  FSEKPAIIALVLYGLLPILQGTITGIESVSRGIREVAQGVGMSTRQILWRVELPLAAPVI 150

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  +  S+        A+    VG        +GS I + +   +   ++   + +  + 
Sbjct: 151 VAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAVVVALLA 203

Query: 253 FLYDQLL 259
            + D + 
Sbjct: 204 IITDMIF 210



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 395 IIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           IIA +I +  GI I         S ++    +   FP      + V  + +      + L
Sbjct: 41  IIAVLIGVGAGIAITRPAGKEFRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKPAIIAL 100

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L  +      IL   I G  +     +EVA    ++  +    + LP   P  V G  T
Sbjct: 101 VLYGLL----PILQGTITGIESVSRGIREVAQGVGMSTRQILWRVELPLAAPVIVAGIRT 156

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +       + ++         + T  LG+ I       +   V+ G +++    +  +  
Sbjct: 157 SVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAVVVALLAIITDMI 209

Query: 573 L 573
            
Sbjct: 210 F 210


>gi|237737816|ref|ZP_04568297.1| ABC transporter permease [Fusobacterium mortiferum ATCC 9817]
 gi|229419696|gb|EEO34743.1| ABC transporter permease [Fusobacterium mortiferum ATCC 9817]
          Length = 215

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 19/216 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T   +  + + SLL  F    L          +S +L  VL  I++ ++S P   F+
Sbjct: 10  TLETLYMVFFSTLFSLLIGFPIGILLTVTKEGNILESPKLNKVLDFIINTLRSFP---FI 66

Query: 117 TFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              ++ F ++           AAI  +  S    +   +  +L  + + L E S S   +
Sbjct: 67  ILMILLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDKGLIEASSSMGAN 126

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W   + + +P +MP ++  + ++       V++          I   G+G        +
Sbjct: 127 NWTIIFKVMIPETMPHIIHGITVT-------VISLIGFSAMAGTIGAGGLGDLAIRFGYQ 179

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
           +    I+   + ++ ++    Q L   ++  + K R
Sbjct: 180 RFKTDIMVYAVIVIIIVVQILQSLGNYLVYRAKKNR 215



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 11/177 (6%)

Query: 376 VLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLA 426
           V  +IW   + T++ V    + + +I  P+GI +           P ++  +      L 
Sbjct: 2   VFSMIWTSTLETLYMVFFSTLFSLLIGFPIGILLTVTKEGNILESPKLNKVLDFIINTLR 61

Query: 427 AFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +FP  +   L+     +       +    + +      ++   +    +       E +S
Sbjct: 62  SFPFIILMILLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDKGLIEASS 121

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           S     W     +++P   P+ + G           S ++     G +       G 
Sbjct: 122 SMGANNWTIIFKVMIPETMPHIIHGITVTVISLIGFSAMAGTIGAGGLGDLAIRFGY 178


>gi|227879333|ref|ZP_03997198.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844510|ref|ZP_05549996.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           125-2-CHN]
 gi|256849102|ref|ZP_05554535.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-1A-US]
 gi|293381058|ref|ZP_06627079.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus 214-1]
 gi|227861077|gb|EEJ68731.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613588|gb|EEU18791.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           125-2-CHN]
 gi|256713878|gb|EEU28866.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-1A-US]
 gi|290922358|gb|EFD99339.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus 214-1]
          Length = 295

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 70/182 (38%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L         R +            +      +   ++   +ISL  
Sbjct: 20  IVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRDQLFNSIYLLILTTIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A   A   K   +  ++   + I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   + H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +++  II+  I +   I++        +++ I+   Q+L++ P+ V   F  
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P D +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|223043442|ref|ZP_03613488.1| D-methionine transport system permease protein MetI [Staphylococcus
           capitis SK14]
 gi|222443231|gb|EEE49330.1| D-methionine transport system permease protein MetI [Staphylococcus
           capitis SK14]
          Length = 219

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           +LD   L Q    T   +  A+VI  L       L   +R+        L  +L PI++I
Sbjct: 5   SLDASQLFQALYETLYMVTVALVIGALIGIPLGILLVVTRKNGIWQNLVLHQILNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  L+  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLLPEALGSLILAITTAIIG 158



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   +      T++ V V ++I ++I IP+GI +             +   + P   +L 
Sbjct: 7   DASQLFQALYETLYMVTVALVIGALIGIPLGILLVVTRKNGIWQNLVLHQILNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY +LP      +    TA  G
Sbjct: 126 KAMGASPLQIIRYFLLPEALGSLILAITTAIIG 158


>gi|57866080|ref|YP_187695.1| ABC transporter permease [Staphylococcus epidermidis RP62A]
 gi|242243352|ref|ZP_04797797.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|251811262|ref|ZP_04825735.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282874619|ref|ZP_06283501.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|293367680|ref|ZP_06614332.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|57636738|gb|AAW53526.1| ABC transporter, permease protein [Staphylococcus epidermidis
           RP62A]
 gi|242233301|gb|EES35613.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|251805223|gb|EES57880.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281296543|gb|EFA89055.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|291318250|gb|EFE58644.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|319399753|gb|EFV88001.1| D-methionine transport system permease protein metI [Staphylococcus
           epidermidis FRI909]
 gi|329727997|gb|EGG64444.1| D-methionine transport system permease protein MetI [Staphylococcus
           epidermidis VCU144]
 gi|329734320|gb|EGG70634.1| D-methionine transport system permease protein MetI [Staphylococcus
           epidermidis VCU028]
 gi|329736082|gb|EGG72355.1| D-methionine transport system permease protein MetI [Staphylococcus
           epidermidis VCU045]
          Length = 219

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           +LD   L Q    T   +  ++VI  L       L   +R+        L  VL PI++I
Sbjct: 5   SLDSSQLLQALYETLYMVTVSLVIGALIGIPLGILLVVTRKNGIWSNTILHQVLNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  L+  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLLPEALGSLILAITTAIIG 158



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V V ++I ++I IP+GI +             +   + P   +L 
Sbjct: 7   DSSQLLQALYETLYMVTVSLVIGALIGIPLGILLVVTRKNGIWSNTILHQVLNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY +LP      +    TA  G
Sbjct: 126 KAMGASPLQIIRYFLLPEALGSLILAITTAIIG 158


>gi|312865278|ref|ZP_07725506.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311099389|gb|EFQ57605.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 208

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L Q         ++++  +LLF  V   L     +L  V V +L +  +IP      
Sbjct: 9   PEKLIQAGLEHVQLTVASLFFALLFASVLTGLLYFLPKLREVSVYLLSLFYAIPSFALFA 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +             ++   I A+     + +  S    L  +     E ++   ++ W
Sbjct: 69  LLIPLTGL--------SKTTVIVALVAYAQYILVRSFLAGLLEVEPSQIEAAQGMGMTNW 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++P LV  + ++         +  MI      I   G+G+ +   ++   
Sbjct: 121 QILRKIRLPLAVPALVSGLRLA-------ATSIIMIATIGATIQAGGLGTLLFDGLRTNS 173

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
           +  + + ++  L +    + +L
Sbjct: 174 IPKLAWGIILSLAITLWVNLIL 195



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 15/190 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T+  +   ++ AS++   +       P +         L  A P+   F L++      
Sbjct: 22  LTVASLFFALLFASVLTGLLYFL----PKLREVSVYLLSLFYAIPSFALFALLIPLTGLS 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + + ++   Q+ ++ + +AG         E A    +T W+  R I LP   P
Sbjct: 78  KTT----VIVALVAYAQYILVRSFLAGLLEVEPSQIEAAQGMGMTNWQILRKIRLPLAVP 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V+G   A            + +     ++  GLG  + +     S P++  G+++   
Sbjct: 134 ALVSGLRLAATSII-------MIATIGATIQAGGLGTLLFDGLRTNSIPKLAWGIILSLA 186

Query: 565 FVLALNRFLW 574
             L +N  L+
Sbjct: 187 ITLWVNLILY 196


>gi|298249648|ref|ZP_06973452.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297547652|gb|EFH81519.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 290

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 87/289 (30%), Gaps = 26/289 (8%)

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
            +  +  +  +       +    +  +R       +          ++D F++    G+ 
Sbjct: 11  AVNEAEVSIVTKARQARTRQRIIVNTLRIGLLIVLVGGWELLSRLGIIDSFFWGQPSGIW 70

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
             +             +  +         T+    +  +I  ++ +  G+ +G    ++ 
Sbjct: 71  AQLVTWVTQGTAQGPLWVQI-------SATLEETFIGFVIGVVLGVISGVVLGRNYFLAD 123

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            + P+ +   A P  V   +    +     +      +L+ F       FN   G     
Sbjct: 124 ILSPYIKAANAIPRVVLGSIFAIGLGLGIQSKIALAVVLVFFIVF----FNAFQGVREVD 179

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +    A     +  +    +I+P    + +    T+   A   ++V E          T
Sbjct: 180 RNLIANARLLGASSRKVSTEVIIPSALTWIIASLHTSFSFALVGAVVGEFIG------ST 233

Query: 537 TGLGAYIAESTEKGSFPEVV-------LGVLIMCCFVLAL-NRFL-WHP 576
            GLG  I  +    +   V           LIM   V +L NR + W P
Sbjct: 234 EGLGLMIESAQANFNANGVFAAMAILAAVALIMEFLVTSLENRLITWRP 282



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 17/223 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            +V  V        L    S T        VI ++   +   +  ++  L  +L P +  
Sbjct: 72  QLVTWVTQGTAQGPLWVQISATLEETFIGFVIGVVLGVISGVVLGRNYFLADILSPYIKA 131

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
             +IP +   +   +        K+  A +   F +         F+ +Q +  + R+L 
Sbjct: 132 ANAIPRVVLGSIFAIGLGLGIQSKIALAVVLVFFIV--------FFNAFQGVREVDRNLI 183

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             +R    S  +    + +P ++  ++ ++  S S   F +V +   VVG+ +    G+G
Sbjct: 184 ANARLLGASSRKVSTEVIIPSALTWIIASLHTSFS---FALVGA---VVGEFIGSTEGLG 237

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266
             I  A    +   +  AM  +  V  + + L   L   +I W
Sbjct: 238 LMIESAQANFNANGVFAAMAILAAVALIMEFLVTSLENRLITW 280


>gi|289435759|ref|YP_003465631.1| phosphate ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289172003|emb|CBH28549.1| phosphate ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 316

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    VL P+++++  IP + +   
Sbjct: 92  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVYGFI 151

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 152 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 210

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 211 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 270

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 271 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 89  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKVLQPVMELLVGIPSVVY 148

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 149 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 208

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 209 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 268

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 269 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 312


>gi|120613147|ref|YP_972825.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
 gi|120591611|gb|ABM35051.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax citrulli AAC00-1]
          Length = 263

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I   +   L       +   T   +L  +    L         A+S  L  VL 
Sbjct: 45  LPAPSAIAASLWQGLCTGYFVPHVRATLAALLLGLAGGGLAGLAIGIALAESPLLERVLR 104

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q +P L      V++F    P   +   L   F         +  + +  L   
Sbjct: 105 PYVVVSQVVPKLALAPLFVLWFGFGIPSTALITGLICFF--------PLMENTFTGLRQA 156

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                ++ R    + WQ    L +P ++P ++  + M++       V  E I        
Sbjct: 157 DAQRLQLFRMLGATRWQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFIGAS----- 211

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G+ +  A    D   +  A++ +  +  L  Q
Sbjct: 212 -RGLGAVVIAAQGMMDTSLMFAALVLIAAIGLLLYQ 246



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 10/159 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P +   ++P+  +    P     PL V    +   +     +L+      + ++ N   
Sbjct: 96  SPLLERVLRPYVVVSQVVPKLALAPLFVLWFGFGIPS----TALITGLICFFPLMENTFT 151

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         ++      T W+    + LP   P  + G   A   A   ++V E     
Sbjct: 152 GLRQADAQRLQLFRMLGATRWQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFIG-- 209

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                + GLGA +  +        +   ++++    L L
Sbjct: 210 ----ASRGLGAVVIAAQGMMDTSLMFAALVLIAAIGLLL 244


>gi|332638459|ref|ZP_08417322.1| phosphate ABC transporter, permease protein [Weissella cibaria KACC
           11862]
          Length = 305

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L + +I+  F    A        +R   +L P+ +++  IP + +    L+  V 
Sbjct: 89  SFLVTLISALIATPFAIGTAVFMTEISPKRGAKILGPVTELLVGIPSVVYGFIGLSVIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +L+ G   G    A+   F   +  +T     +L ++PR   E S +   + WQ  +
Sbjct: 149 VMRHLFGGSGFGILAGAMVL-FVMILPTVTSMTVDTLKSVPRHYRESSLALGATRWQMIY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  + PG++  ++  M+  +   +A +M+V  
Sbjct: 208 KVILRAATPGILTAVVFGMARAFGEALAVQMVVGN 242



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 80/243 (32%), Gaps = 19/243 (7%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS-IGYIVNHFT 372
             L ++    +  F            V  +L IFWF    G+A   A +  +   +    
Sbjct: 7   SLLKQSAATRKDRFGRYISLAALLLIVVVVLSIFWFVASKGLATFFANKVNLWDFLTGTK 66

Query: 373 YQDV-----LYVIWLGCITMFRVVVLIIIASIIWIP--VGIWIGFR----PHISSKIQPF 421
           +         +        +    ++ +I+++I  P  +G  +          +  + P 
Sbjct: 67  WAPGQKDANGHPFVGAAPMIVGSFLVTLISALIATPFAIGTAVFMTEISPKRGAKILGPV 126

Query: 422 AQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASA 474
            +LL   P+ V+  + +S +       +      +    +++F      +    +    +
Sbjct: 127 TELLVGIPSVVYGFIGLSVIVPVMRHLFGGSGFGILAGAMVLFVMILPTVTSMTVDTLKS 186

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P  ++E + +   T W+    +IL    P  +T  +     A+  ++  ++       +
Sbjct: 187 VPRHYRESSLALGATRWQMIYKVILRAATPGILTAVVFGMARAFGEALAVQMVVGNAALM 246

Query: 535 RTT 537
              
Sbjct: 247 PQN 249


>gi|302876943|ref|YP_003845576.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|307687632|ref|ZP_07630078.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
 gi|302579800|gb|ADL53812.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium cellulovorans 743B]
          Length = 267

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 90/221 (40%), Gaps = 14/221 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F+ V  + ++++         R +       ++          T  R + +  ++L 
Sbjct: 17  IIVFLSVWEVASLIIDNEIYLPSLRIVAIDFLKIIEDKDFGITLYSTLYRTVVSFWLALA 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              ++  LA  +  +  +LVP+  I +S+P +  +  ++++        V+G  +A    
Sbjct: 77  IAVIFGGLALMNMSIRNLLVPLNAIAKSMPTMILVVLSLIWVDKDNAPLVVGVAIA--LP 134

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +         S+  I +++ E+   +R++  +KF ++ +P     LV  +  ++S
Sbjct: 135 IVYDTI-------LSSIERIDKNIVEMLNVYRVNRLEKFKHIYLPTVAYSLVGILSSTIS 187

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                V+A E+        P  GIG+ + +     +  AI 
Sbjct: 188 LILKVVIAGEV-----HGQPRYGIGAMVQIEKVNFNTPAIF 223



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 75/223 (33%), Gaps = 26/223 (11%)

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------------TMFRVVVLIII 396
           ++  +     W+    I+++  Y   L ++ +  +              T++R VV   +
Sbjct: 14  LIAIIVFLSVWEVASLIIDNEIYLPSLRIVAIDFLKIIEDKDFGITLYSTLYRTVVSFWL 73

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A  I +  G        I + + P   +  + P  +   L +  V   +    + +++ +
Sbjct: 74  ALAIAVIFGGLALMNMSIRNLLVPLNAIAKSMPTMILVVLSLIWVDKDNAPLVVGVAIAL 133

Query: 457 IFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  I+++ I +       +  E+ + + +     +++I LP +    V    +   
Sbjct: 134 ------PIVYDTILSSIERIDKNIVEMLNVYRVNRLEKFKHIYLPTVAYSLVGILSSTIS 187

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                 I  EV           G+GA +       + P +   
Sbjct: 188 LILKVVIAGEV-----HGQPRYGIGAMVQIEKVNFNTPAIFSW 225


>gi|114766716|ref|ZP_01445655.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Pelagibaca bermudensis HTCC2601]
 gi|114541106|gb|EAU44161.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Roseovarius sp. HTCC2601]
          Length = 286

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 9/191 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +A  T    L+   +        A      R + M ++P +   Q+IPIL  
Sbjct: 78  TSKRSLVYHAWVTLSATLAGFAMGTALGVALAVGIVYVRVMDMSVMPWVIASQTIPILAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V    +    ++   + +++  F    + +   M + L    R   +  R++  +
Sbjct: 138 APMIIVVLNAMGLSGLLPKAMISMYLSF----FPVVVGMVKGLRAPSRMQLDQMRTWNAT 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q+F  L +P SMP L  ++ ++M+      +  E+         + G+G+ +      
Sbjct: 194 QGQEFLRLRLPSSMPYLFASLKIAMAASLVGAIVGEL-----PTGAVAGLGARLLAGSYY 248

Query: 236 QDLLAILYAML 246
              + I  A+ 
Sbjct: 249 GQTIQIWSALF 259



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 72/183 (39%), Gaps = 5/183 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   +    + + + + + + I +   +   + P+       P     P++
Sbjct: 82  SLVYHAWVTLSATLAGFAMGTALGVALAVGIVYVRVMDMSVMPWVIASQTIPILAIAPMI 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +  ++   L+  L  +++ ++ + + ++  ++ G  A      +   +++ T  + +  +
Sbjct: 142 IVVLNAMGLSGLLPKAMISMYLSFFPVVVGMVKGLRAPSRMQLDQMRTWNATQGQEFLRL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   PY       A   +   +IV E+ +         GLGA +   +  G   ++  
Sbjct: 202 RLPSSMPYLFASLKIAMAASLVGAIVGELPTGA-----VAGLGARLLAGSYYGQTIQIWS 256

Query: 558 GVL 560
            + 
Sbjct: 257 ALF 259


>gi|322371333|ref|ZP_08045885.1| sugar ABC transporter permease protein [Haladaptatus
           paucihalophilus DX253]
 gi|320549323|gb|EFW90985.1| sugar ABC transporter permease protein [Haladaptatus
           paucihalophilus DX253]
          Length = 292

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 83/210 (39%), Gaps = 13/210 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRL-GMVLVPILDIMQSIPILGFLTFTVVY 122
           Y   + +   +  +I +    +     ++   L    L+  +   + IP +  +   V +
Sbjct: 77  YTLNSLIVAGTTTLICVTLGTLSGYTFSRYDFLGNKALLLSIIAARMIPPIALI---VPF 133

Query: 123 FMNLYPGKVIGAELAAIF-----AIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRSFRL 174
           F  +    VIGA   +++      I T   +N+ F+++        +PR L+E ++    
Sbjct: 134 FEIMSNPPVIGALTGSLYNTKAALILTYTFFNLPFAVWIMKNYFDGVPRSLDEQAQVDGC 193

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S W+ F+ + +P + PG+    +++    W   V + ++   +    LP IG  + +A  
Sbjct: 194 STWEGFFKVILPVAKPGIAATAILAFIFSWNEFVFALVLTSSEVSQTLP-IGVSLFVADD 252

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
             D   +    +       L+     R ++
Sbjct: 253 FIDWAHLAAGGMIAALPGILFGLFFQRYIV 282



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 69/218 (31%), Gaps = 18/218 (8%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ---PFAQLLAA-- 427
           Y ++      G  T+  ++V     ++I + +G   G+       +        ++AA  
Sbjct: 65  YVEIFQNRPFGTYTLNSLIVA-GTTTLICVTLGTLSGYTFSRYDFLGNKALLLSIIAARM 123

Query: 428 FPANVFF-PLVVS-----CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA----FPN 477
            P      P          +     +     + L++  T + + F V           P 
Sbjct: 124 IPPIALIVPFFEIMSNPPVIGALTGSLYNTKAALILTYTFFNLPFAVWI-MKNYFDGVPR 182

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E A     + W  +  +ILP   P     AI A   +WN  + + V +   +     
Sbjct: 183 SLDEQAQVDGCSTWEGFFKVILPVAKPGIAATAILAFIFSWNEFVFALVLTSSEVSQTLP 242

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            +G  +  + +   +  +  G +I     +    F   
Sbjct: 243 -IGVSLFVADDFIDWAHLAAGGMIAALPGILFGLFFQR 279


>gi|303246776|ref|ZP_07333053.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
 gi|302491793|gb|EFL51673.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio fructosovorans JJ]
          Length = 246

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +    T  R L+          +           G      ++ ++ +P +  +  
Sbjct: 44  GELWRQGGATLWRTLAGFAFGGGVGVLLGFCCGVFPEFGRASRTTVEFLRPMPSVALIPI 103

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +++    +   V  A  A          W    +          +L   +R + LS  +
Sbjct: 104 GILFLGLGFGLCVGIAGFAC--------CWPAYVAALAGASAAGPELLATARVYGLSRRE 155

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               +  P ++P ++  + ++++      V +EM   G       G+GS+I  +   +  
Sbjct: 156 TILLVRAPAALPQVMAGLRVALAVAVAVTVTTEMAAAGS------GLGSFILESSLARRP 209

Query: 239 LAILYAMLTMLGVIFLYD 256
            A+   ++ +  + F  +
Sbjct: 210 DAMYAGIVAVGLLGFGLN 227



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 10/194 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +   G  T++R +        + + +G   G  P      +   + L   P+    P+
Sbjct: 44  GELWRQGGATLWRTLAGFAFGGGVGVLLGFCCGVFPEFGRASRTTVEFLRPMPSVALIPI 103

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +             +  F   W      +AGASA   +    A  + ++       
Sbjct: 104 GILFLGLGFG----LCVGIAGFACCWPAYVAALAGASAAGPELLATARVYGLSRRETILL 159

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  P   P  + G   A   A   ++ +E+A+ G      +GLG++I ES+       + 
Sbjct: 160 VRAPAALPQVMAGLRVALAVAVAVTVTTEMAAAG------SGLGSFILESSLARRPDAMY 213

Query: 557 LGVLIMCCFVLALN 570
            G++ +      LN
Sbjct: 214 AGIVAVGLLGFGLN 227


>gi|205353300|ref|YP_002227101.1| permease [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205273081|emb|CAR38034.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628389|gb|EGE34732.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 243

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         + ++           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASIVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++ +          + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIASIVG-------ASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|310639314|ref|YP_003944073.1| permease protein of ABC transporter [Ketogulonicigenium vulgare
           Y25]
 gi|308752890|gb|ADO44034.1| permease protein of ABC transporter [Ketogulonicigenium vulgare
           Y25]
          Length = 251

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 15/224 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI   +      + V  +      G+    +P     I  + L+   +  +A  T     
Sbjct: 4   RILTPLLPFAVLLAVWEV-YCAAMGVSPLILPSPSGVIRALVLNRAEIGPHALATLWVAA 62

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               IS+ F F  +     +  +   ++P+    Q++P++      +++F      KV+ 
Sbjct: 63  LGFSISVGFAFATSVALHFAPVIERAVMPLFVASQTVPLVALAPLMILWFGFGLLPKVLL 122

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L     +          S+       P    ++  S     W  F    +P +  G +
Sbjct: 123 VVLVTFLPV--------LMSLLSGYRQTPTAFADLLTSMGAGRWAVFRRAVLPSARAGFL 174

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             + +S +      + +E            G+G YI  A     
Sbjct: 175 AGLRISATYAIVATIFAEYAG------ARRGLGIYILAAKNNFR 212



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 10/167 (5%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              T++   +   I+        + + F P I   + P        P     PL++    
Sbjct: 54  ALATLWVAALGFSISVGFAFATSVALHFAPVIERAVMPLFVASQTVPLVALAPLMILWFG 113

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L   L + L+           ++++G    P  F ++ +S     W  +R  +LP  
Sbjct: 114 FGLLPKVLLVVLVTFLPVL----MSLLSGYRQTPTAFADLLTSMGAGRWAVFRRAVLPSA 169

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
              ++ G   +   A  A+I +E A          GLG YI  +   
Sbjct: 170 RAGFLAGLRISATYAIVATIFAEYAG------ARRGLGIYILAAKNN 210


>gi|242372705|ref|ZP_04818279.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242349622|gb|EES41223.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 219

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           +LD   L Q    T   +  A++I  L       L   +R+        L  +L PI++I
Sbjct: 5   SLDASQLFQALYETLYMVTVALIIGALIGIPLGILLVVTRKNGIWPNIVLHQILNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S +Q   Y  +P ++  L+  +  ++ G
Sbjct: 123 EAAKAMGASPFQIIRYFLLPEALGSLILAITTAVIG 158



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   +      T++ V V +II ++I IP+GI +             +   + P   +L 
Sbjct: 7   DASQLFQALYETLYMVTVALIIGALIGIPLGILLVVTRKNGIWPNIVLHQILNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   + ++  RY +LP      +    TA  G
Sbjct: 126 KAMGASPFQIIRYFLLPEALGSLILAITTAVIG 158


>gi|254510614|ref|ZP_05122681.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221534325|gb|EEE37313.1| ABC transporter, permease protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 281

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 91/271 (33%), Gaps = 12/271 (4%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
            F+ L         +            ++  +       +   W  VV G+ + +     
Sbjct: 5   VFAFLLWLSGWWLNSRLASGPQADTRMVRFLAPLIFGLTVIGIWELVVRGLEVPLVILPA 64

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFR--VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
             ++    + D L ++W   +       +   +I       + I +     +   + P  
Sbjct: 65  PSVIA-VRFADSLPILWADFVQTIIKGALSGYVIGCGAAFLMAIAVDRWDFLRLGLLPVG 123

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             +AA P     P++V    +   +    + +++ F     +L N +AG        +++
Sbjct: 124 NFVAALPIVGTAPILVMWFGFDWHSKAAVVVVMVFF----PMLVNAVAGLREATAMQRDL 179

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++  T W+ +  + LP   P+   G   +   A   +IV+E      +     G+G  
Sbjct: 180 METYAATYWQSFLKLRLPAAMPFIFNGLKISTTLALIGAIVAEFFGSPIV-----GMGFR 234

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           I+ S  + S   V   +++      A    +
Sbjct: 235 ISTSVGQLSLDMVWAEIVVAALAGTAFYGLV 265



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           LS  VI     F+ A    +   L + L+P+ + + ++PI+G     V++F   +  K  
Sbjct: 92  LSGYVIGCGAAFLMAIAVDRWDFLRLGLLPVGNFVAALPIVGTAPILVMWFGFDWHSKAA 151

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +   F         M  +    L        ++  ++  + WQ F  L +P +MP +
Sbjct: 152 VVVVMVFF--------PMLVNAVAGLREATAMQRDLMETYAATYWQSFLKLRLPAAMPFI 203

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +S +      + +E         P+ G+G  I+ ++ +  L  +   ++      
Sbjct: 204 FNGLKISTTLALIGAIVAEFFGS-----PIVGMGFRISTSVGQLSLDMVWAEIVVAALAG 258

Query: 253 FLYDQLL 259
             +  L+
Sbjct: 259 TAFYGLV 265


>gi|119387066|ref|YP_918121.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377661|gb|ABL72425.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 514

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 68/497 (13%), Positives = 145/497 (29%), Gaps = 55/497 (11%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
             R L+    +    FV   LAA +     +L P L  + S   L      +V    +  
Sbjct: 47  LSRALAVTGGNAAAGFVLGNLAAVALAGLALLWPRLTGLVSGLALVVFCLPLVATGPILR 106

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +   +   I     +  +     +   L  +P    ++   +      +  ++ +  +
Sbjct: 107 VMMGPGDGPQIALAALAVYYTTLIPLLAGLRAVPAAWLDLIHVYGRGRMAELRHVRLRAA 166

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P LV  + +S    +         +VG+      G+G       +  D+ A L+++  +
Sbjct: 167 LPYLVAGLQISAPAAFL------GALVGEFTGAERGMGVLTIRFTRALDVPA-LWSIAAL 219

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
              + +                                           IG  +  F   
Sbjct: 220 AAAVPV--------------------------------------AAYALIGALAHRFLDE 241

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
               +     T    R   P + L + +    ++   +    +    A          I 
Sbjct: 242 TPPVLLAPPGTARRSRRAAPVSALAVIATVLGAWWAGMRLAGLSPFFAKRPGDVLAALIW 301

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
                +    +      T   V+            + + +   P +S+ + P A  L A 
Sbjct: 302 APDAAEARQTLAGALAQTGAHVLPGYAAGLAAGAGLAVLLALLPALSALVTPLAIALRAI 361

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     PL+V  V        + +++++ F            G    P    +V  ++  
Sbjct: 362 PIVTTAPLIVLLVGRGAAGVVVLVAVMVFF----PTFVACQHGLRQAPGQILDVFRTYAA 417

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
             WR   ++ +P + P     A  +   A  A  V E  + G       G+G  +A S  
Sbjct: 418 GRWRQMIHVRIPAMLPALFASARMSVPAAVLAVTVVEWLATGG------GIGGLMALSAS 471

Query: 549 KGSFPEVVLGVLIMCCF 565
              +  +   V+++   
Sbjct: 472 VSDYDMLWSSVVLVTLI 488



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 75/194 (38%), Gaps = 15/194 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L    ++T   +L      L      A L A    L  ++ P+   +++IPI+     
Sbjct: 310 QTLAGALAQTGAHVLPGYAAGLAAGAGLAVLLALLPALSALVTPLAIALRAIPIVTTAPL 369

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+       G V+   +   F  F +            L   P  + +V R++    W+
Sbjct: 370 IVLLVGRGAAGVVVLVAVMVFFPTFVAC--------QHGLRQAPGQILDVFRTYAAGRWR 421

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +  ++ +P  +P L  +  MS+      V   E +  G       GIG  +AL+    D 
Sbjct: 422 QMIHVRIPAMLPALFASARMSVPAAVLAVTVVEWLATGG------GIGGLMALSASVSDY 475

Query: 239 LAILYAMLTMLGVI 252
             +L++ + ++ +I
Sbjct: 476 D-MLWSSVVLVTLI 488


>gi|309790670|ref|ZP_07685221.1| phosphate ABC transporter, inner membrane subunit PstA
           [Oscillochloris trichoides DG6]
 gi|308227264|gb|EFO80941.1| phosphate ABC transporter, inner membrane subunit PstA
           [Oscillochloris trichoides DG6]
          Length = 440

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 38/166 (22%)

Query: 76  MVISLLFTFVYATLAAKS-----------------RRLGMVLVPILDIMQS-------IP 111
           ++I++LF F     AA                   RRL  +L     I+Q+       +P
Sbjct: 195 LLITVLFAFPLGIGAALYLEEYATDKLFDERSPVGRRLNAILHRGSSIIQTNIYNLSGVP 254

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAI--------------FAIFTSQVWNMTFSMYQS 157
            + +    +  F+        G+ L A                 +    +  +  S  ++
Sbjct: 255 SIIYGMLGLAIFVRALESFTSGSFLGATTDATANGRTIMAAGMTMALLVLPVVIISSQEA 314

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +  +P  L + S     + WQ  W + +P ++PG++   ++++S  
Sbjct: 315 IRAVPNSLRQASYGLGATRWQTIWKVVLPNALPGILTGTILAISRA 360



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    +   L +  ++I  +Q            A PN  ++ +     T W+    ++LP
Sbjct: 292 IMAAGMTMALLVLPVVIISSQ--------EAIRAVPNSLRQASYGLGATRWQTIWKVVLP 343

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG I A   A
Sbjct: 344 NALPGILTGTILAISRA 360


>gi|197303871|ref|ZP_03168906.1| hypothetical protein RUMLAC_02609 [Ruminococcus lactaris ATCC
           29176]
 gi|197297054|gb|EDY31619.1| hypothetical protein RUMLAC_02609 [Ruminococcus lactaris ATCC
           29176]
          Length = 290

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 72/177 (40%), Gaps = 3/177 (1%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
           VL+  II IL++G+         +        V  +L      T L +L A+   +    
Sbjct: 41  VLIFLIIYILVNGLPYMKPSLFSLHYTSENASVIPALVNTVVMTLLSLLIAVPFGIFSAV 100

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A +  +   V+    + +  IP + +  F +++F+N        + LA  F +  
Sbjct: 101 FLVEYAGRGNKFIDVIRLTTETLSGIPSIVYGLFGMLFFVNALHWGF--SILAGAFTLSI 158

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +  +  +  ++L ++P    E S        +  + + +P ++PG++  +++++ 
Sbjct: 159 MILPLIMRTTEEALKSVPDSYREGSFGLGAGKLRTVFKIVLPSAVPGILAGVILAIG 215



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 10/177 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI-- 406
           F V+  + I I    + Y+                   +   VV+ +++ +I +P GI  
Sbjct: 39  FAVLIFLIIYILVNGLPYMKPSLFSLHYTSENASVIPALVNTVVMTLLSLLIAVPFGIFS 98

Query: 407 ------WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLSLLMIFG 459
                 + G        I+   + L+  P+ V+    +       H   ++      +  
Sbjct: 99  AVFLVEYAGRGNKFIDVIRLTTETLSGIPSIVYGLFGMLFFVNALHWGFSILAGAFTLSI 158

Query: 460 TQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
               ++         + P+ ++E +        R    I+LP   P  + G I A G
Sbjct: 159 MILPLIMRTTEEALKSVPDSYREGSFGLGAGKLRTVFKIVLPSAVPGILAGVILAIG 215


>gi|157144937|ref|YP_001452256.1| hypothetical protein CKO_00666 [Citrobacter koseri ATCC BAA-895]
 gi|157082142|gb|ABV11820.1| hypothetical protein CKO_00666 [Citrobacter koseri ATCC BAA-895]
          Length = 243

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 17/236 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L + +  ++ G+    A     +             + L     + V V  +IA  + 
Sbjct: 9   FWLIVAFLALLAGLPYSQAVFGALFPQLPRPVYQQESFMALALAHFWLVGVSSLIAVAVG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  VGAGIAV--TRSWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQEPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A P     VA    ++  +    + LP   P  + G  T+    
Sbjct: 127 L----PILQATLAGLGAIPASVMSVARGMGMSRGQQLWKVELPLAAPVILAGIRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + ++         +  + LG  I       +   V+ G L++    + ++R  
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIVDRLF 231



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 17/203 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + +I++           +S       ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGVSSLIAVAVGVGAGIAVTRSWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  IP  +  V+R   +S  Q+ W 
Sbjct: 110 MG--------FGQEPAIIALILYGVLPILQATLAGLGAIPASVMSVARGMGMSRGQQLWK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIV 265
              L +     + D+L  R ++ 
Sbjct: 215 QGALLVALAAIIVDRLFERLVLR 237


>gi|91225727|ref|ZP_01260756.1| Putative ABC transporter permease [Vibrio alginolyticus 12G01]
 gi|91189616|gb|EAS75891.1| Putative ABC transporter permease [Vibrio alginolyticus 12G01]
          Length = 244

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ---SIPILGFLT 117
           +     +    +L +  +++L       L ++  R   V    + ++    +IP L  L 
Sbjct: 40  IVYLTVQHIELVLLSGGLAILIAIPVGVLLSR-PRFQKVAESAMQVLNVGTTIPTLAILA 98

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             + +             + A+F +  + +  +  + Y  L  +P  L+E +    ++  
Sbjct: 99  LAMSFLGIG--------TVPAVFGLTIASLLPIVRNTYIGLKEVPAHLKEAASGIGMTEL 150

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           Q  + + +P ++      +  +++
Sbjct: 151 QMLFQVEIPNALFVTFAGIRTALA 174



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
            ++  + C  A+GI  Q  G I +   YQ+   +++L    +  V++   +A +I IPVG
Sbjct: 9   YYFVLLACVFALGIYLQGAGTIDDFLYYQE--DIVYLTVQHIELVLLSGGLAILIAIPVG 66

Query: 406 IWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           + +  RP      +   Q+L      P      L +S +    +     L++     +  
Sbjct: 67  VLL-SRPRFQKVAESAMQVLNVGTTIPTLAILALAMSFLGIGTVPAVFGLTI----ASLL 121

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            I+ N   G    P   KE AS   +T  +    + +P        G  TA 
Sbjct: 122 PIVRNTYIGLKEVPAHLKEAASGIGMTELQMLFQVEIPNALFVTFAGIRTAL 173


>gi|297200184|ref|ZP_06917581.1| choline transport system permease opuBB [Streptomyces sviceus ATCC
           29083]
 gi|197713365|gb|EDY57399.1| choline transport system permease opuBB [Streptomyces sviceus ATCC
           29083]
          Length = 213

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L           LSA+   LL +   A +A + R L   L+ + +++ +IP +
Sbjct: 8   ISGHTDDLTTLTVSHLQAALSAVFFGLLISLPLAVVAHRIRPLRGFLLGLSNVLFTIPSI 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +          VIG  +  +  +          +  + L ++P   +E +++  
Sbjct: 68  AIFVLLLPVSGLTRTTTVIGLTVYTLVVLLR--------NTVEGLDSVPAKTKEAAKAMG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               +    + +P ++P ++  + ++        V S  +V   T I   G+G       
Sbjct: 120 TRPLRTLLTVELPLALPVIMAGVRIA-------TVMSISLVSVATYIGDGGLGQLFTDGF 172

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
           +      ++  ++  L +  + D LL
Sbjct: 173 QRDFPTPVIAGVVLTLLLAVVADALL 198



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +  +    +I +P+ +       +   +   + +L   P+   F L++        
Sbjct: 23  LQAALSAVFFGLLISLPLAVVAHRIRPLRGFLLGLSNVLFTIPSIAIFVLLLPVSGLTRT 82

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L++     T   +L N + G  + P   KE A +      R    + LP   P  
Sbjct: 83  TTVIGLTVY----TLVVLLRNTVEGLDSVPAKTKEAAKAMGTRPLRTLLTVELPLALPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A   + +   V+     G       GLG    +  ++     V+ GV++     
Sbjct: 139 MAGVRIATVMSISLVSVATYIGDG-------GLGQLFTDGFQRDFPTPVIAGVVLTLLLA 191

Query: 567 LALNRFL 573
           +  +  L
Sbjct: 192 VVADALL 198


>gi|332704464|ref|ZP_08424552.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332554613|gb|EGJ51657.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 590

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 76/499 (15%), Positives = 145/499 (29%), Gaps = 45/499 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFL-------TFT 119
           T    L +  ++LL    +     +K + L       ++  ++ P+L  L          
Sbjct: 64  TIKITLVSSFLALLLGTFFGLGRLSKFKPLRWTSNAYVEFFRNTPLLVQLFFWYFAMPLA 123

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +      +          A   +       M   +   L +IP+ L E + S  LS +Q 
Sbjct: 124 LPEAAREFAYAQDFEFWTATIGLSIYTGSFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQV 183

Query: 180 FWYLGVPFSMPGL-------VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
              + +P +   +         N M + S     V  +E+      V  L   G     A
Sbjct: 184 LTRIILPLAFRAIIPPLGSEFLNNMKNSSLA-MVVGVAELCWQSQQVESLTFRGFEATTA 242

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
                L   L   L +  V      L  RP        R      ++   S +  L R +
Sbjct: 243 ATVLYLSLSLTISLVLNSVNVRLRSLEHRP--------RNRVLRTLHILFSPLGRLRRAS 294

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
                I   +    SP +  +++L R L  +          + + +     +  +    V
Sbjct: 295 RQSTPIQAQASLRLSPGAAFMRRLGRILAGL---------GIPAAKIGFVAILGYLLLQV 345

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
                   WQ I                          +   I+ S I I V  +IG   
Sbjct: 346 AQGVASFNWQVIADNFRTLLIWRFPQGDETELFLGLGGLSFSILMSFIAITVSFFIGLVV 405

Query: 413 HISSK---------IQPFAQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            ++              + + +   P      +    +   +  +LN     ++ +   T
Sbjct: 406 GLARASKNRLFSLPATLYIECIRGTPLIMVIFWTYFFLPAFTGSYLNVFWSATIALTVFT 465

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
             Y+   V  G    P    E A S  ++  +  R I+LP      +   +      +  
Sbjct: 466 GAYLAEIVRGGIQNIPPGQVEAACSTGLSYSQTMRKIVLPQALKQMIPAIVGQFIAIFKD 525

Query: 521 SIVSEVASWGHIHLRTTGL 539
           + ++ V     +     GL
Sbjct: 526 TSLAYVIGVLELTFVAQGL 544



 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 2/126 (1%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            S + L    A+ +S     V     A+K+R   +     ++ ++  P L  + F   +F
Sbjct: 384 LSFSILMSFIAITVSFFIGLVVGLARASKNRLFSLPATLYIECIRGTP-LIMVIFWTYFF 442

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +  + G  +    +A  A+       +   +   + NIP    E + S  LS  Q    +
Sbjct: 443 LPAFTGSYLNVFWSATIALTVFTGAYLAEIVRGGIQNIPPGQVEAACSTGLSYSQTMRKI 502

Query: 184 GVPFSM 189
            +P ++
Sbjct: 503 VLPQAL 508


>gi|269101964|ref|ZP_06154661.1| methionine ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161862|gb|EEZ40358.1| methionine ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 228

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +   +T + +L + +I  +       +   S++        L   L  I++I +SIP 
Sbjct: 20  LIEALGQTLVMVLVSGLIGFIIGIPLGVMLHLSKKGGLLENKALNKSLGFIVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +++ 
Sbjct: 79  FIILLVAIIPFTRFVVGSSIGT-AAAIVPLTVGAIPFIARLVEGALLEVPAGLVEAAQAM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG++  + +++
Sbjct: 138 GATPKQIITKVLLPEALPGIINGVTITL 165



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V+V  +I  II IP+G+ +             ++  +     +  + P  +   + 
Sbjct: 27  TLVMVLVSGLIGFIIGIPLGVMLHLSKKGGLLENKALNKSLGFIVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P    E A +   T  +  
Sbjct: 86  IIPFTRFVVGSSIGTAAAIVPLTVGAIPFIARLVEGALLEVPAGLVEAAQAMGATPKQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  + G         + S ++     G +          I    ++     
Sbjct: 146 TKVLLPEALPGIINGVTITLVTLVSYSAMAGTVGGGGLGDVG------IRYGYQRFDGTV 199

Query: 555 VVLGVLIMCCFVLAL 569
           + + V+++   V  +
Sbjct: 200 MAITVVMLIILVQLI 214


>gi|313472462|ref|ZP_07812954.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 1153]
 gi|239529885|gb|EEQ68886.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 1153]
          Length = 300

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 20/226 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
           P      +LP   +   + +L+ ++ +        A      +  G +L PI++++  +P
Sbjct: 71  PSHNSFGALPMIVTSFVVTLLAGLIAAPFALIIALAINEIFPKWFGKILQPIIELLVGVP 130

Query: 112 ILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            + +    L        +++ G   G  LAA+  +F   +  M   M  SL   P+    
Sbjct: 131 SVVYGFAGLILVTPVLRSIFGGSGFGI-LAAVVVLFMMILPTMVSMMVDSLRATPKTFRT 189

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD---------- 217
            S     + WQ    + +P +  GL+  ++  M+  +   +A +M++             
Sbjct: 190 ASYGLGATRWQTLHMVVIPSAKGGLLTAIVFGMTRAFGEALAVQMVIGNAALMPQNLMSP 249

Query: 218 ----TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               T +   G+G+ I        L ++ + +L M  V  +  +L+
Sbjct: 250 AATLTSVLTTGMGNTIMGTSANDALWSLAFVLLVMSLVFNILIKLI 295



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 89/258 (34%), Gaps = 27/258 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +F    G+A+     +  +     +  +  +  +     +    V+ ++A +I  
Sbjct: 38  VISIIFFLTGKGLALFFKDHANVWQFLTSSNWEPSHNSFGALPMIVTSFVVTLLAGLIAA 97

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSCV--SYYHLNPNL 450
           P  + I               +QP  +LL   P+ V+      LV   +   +      +
Sbjct: 98  PFALIIALAINEIFPKWFGKILQPIIELLVGVPSVVYGFAGLILVTPVLRSIFGGSGFGI 157

Query: 451 WLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +++++F      +   ++    A P  F+  +     T W+    +++P      +T 
Sbjct: 158 LAAVVVLFMMILPTMVSMMVDSLRATPKTFRTASYGLGATRWQTLHMVVIPSAKGGLLTA 217

Query: 510 AITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAYIAESTEKGSFPEV 555
            +     A+  ++  ++                     + TTG+G  I  ++   +   +
Sbjct: 218 IVFGMTRAFGEALAVQMVIGNAALMPQNLMSPAATLTSVLTTGMGNTIMGTSANDALWSL 277

Query: 556 VLGVLIMCCFVLALNRFL 573
              +L+M      L + +
Sbjct: 278 AFVLLVMSLVFNILIKLI 295


>gi|319777667|ref|YP_004137318.1| spermidine/putrescine abc transporter permeaseprotein potb
           [Mycoplasma fermentans M64]
 gi|49354308|gb|AAT65036.1| PotB [Mycoplasma fermentans]
 gi|238809477|dbj|BAH69267.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038742|gb|ADV34941.1| Spermidine/putrescine ABC transporter permeaseprotein PotB
           [Mycoplasma fermentans M64]
          Length = 272

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L    +     R+    L + ++ L+  F YA   A ++   + +  +  I+  + I   
Sbjct: 53  LAEKGIWLIIWRSLKIGLISAILCLIIAFPYAYFIATTKSKYLAIYALSLILSPMIIFTI 112

Query: 116 LTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                +  +F++++    + AE   +F +    +  M   +Y    ++P+++ E S    
Sbjct: 113 AKIYAIRGFFLSIFEEDSLNAEWFMVFGLTYLNLPYMIMPLYTVFKDMPKNILEASADLG 172

Query: 174 LSGWQKFWYLGVPFSMPGLVWN-MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            + +Q  + + VP+S   ++    M+ +S    FV++++++  G  +     IGS I   
Sbjct: 173 YNKFQTLFKVVVPYSFKAILSGFSMIFLSSATTFVISAKLLPNGTQLQT---IGSVINDY 229

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
               +   +      +L V  ++
Sbjct: 230 SSPSNKYELALGSTLVLVVSAIF 252



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   ++  I+  II  P   +I         I   + +L+     +F    +  +  + 
Sbjct: 65  SLKIGLISAILCLIIAFPYAYFIATTKSKYLAIYALSLILSPM--IIFTIAKIYAIRGFF 122

Query: 446 LN----PNLWLSLLMIFGTQW----YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           L+     +L     M+FG  +    Y++  +       P +  E ++      ++    +
Sbjct: 123 LSIFEEDSLNAEWFMVFGLTYLNLPYMIMPLYTVFKDMPKNILEASADLGYNKFQTLFKV 182

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           ++P  F   ++G       +    ++S         L+T  +G+ I + +   +  E+ L
Sbjct: 183 VVPYSFKAILSGFSMIFLSSATTFVISAKLLPNGTQLQT--IGSVINDYSSPSNKYELAL 240

Query: 558 G---VLIMCCFVLALNRFL 573
           G   VL++    +     +
Sbjct: 241 GSTLVLVVSAIFIGCYGLI 259


>gi|83943283|ref|ZP_00955743.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
 gi|83846291|gb|EAP84168.1| ABC transporter, permease protein [Sulfitobacter sp. EE-36]
          Length = 244

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  +    L A+ +++  T               +   I +I Q+ P +  L   V    
Sbjct: 58  ALASVAATLVAVTLAIFVTRPVGA------SFLPLSRTITNIGQTFPPVAVLALAVPALG 111

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                         + A+F   +  +  +   +L  +P    E +R   L+ WQ+ W + 
Sbjct: 112 FGAGP--------TLVALFLYGLLPIFENAITALSTLPPATMEAARGMGLNRWQRLWRVE 163

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P ++P ++  + +S       VV +       + +    +G  I   +   +   +L  
Sbjct: 164 LPLALPVILTGIRLS-------VVIALGTATIGSTVAARTLGEVIIAGLLTNNTAYVLQG 216

Query: 245 MLTMLGVIFLYDQLLFR 261
            L +     L    + +
Sbjct: 217 GLIVGLFAVLIYDAMAQ 233



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 17/184 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQP----FAQLLAAFPANVFFPLVVSCVSYYH 445
           V +  + A+++ + + I++     + +   P       +   FP      L V  + +  
Sbjct: 57  VALASVAATLVAVTLAIFV--TRPVGASFLPLSRTITNIGQTFPPVAVLALAVPALGFGA 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + L L  +      I  N I   S  P    E A    +  W+    + LP   P 
Sbjct: 115 GPTLVALFLYGLL----PIFENAITALSTLPPATMEAARGMGLNRWQRLWRVELPLALPV 170

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   +   A   + +          +    LG  I       +   V+ G LI+  F
Sbjct: 171 ILTGIRLSVVIALGTATIG-------STVAARTLGEVIIAGLLTNNTAYVLQGGLIVGLF 223

Query: 566 VLAL 569
            + +
Sbjct: 224 AVLI 227


>gi|329940205|ref|ZP_08289487.1| ABC transporter permease [Streptomyces griseoaurantiacus M045]
 gi|329301031|gb|EGG44927.1| ABC transporter permease [Streptomyces griseoaurantiacus M045]
          Length = 258

 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 81/199 (40%), Gaps = 17/199 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  + + LL       L  + R L   ++ +  I+ ++P L F    + Y          
Sbjct: 27  LIPVAVGLLLALPIGQLCVRVRWLYPPVLWVTTILYAVPSLAFFVVLIDYTGQ------- 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E   +  +    +  +  ++   + ++P++    + +  L   +++  + +P ++P L
Sbjct: 80  -SETTVMIPLAVYSLVVLVPAIVDGVRSVPQETLAAATAMGLGPVRRYLQVQLPIAVPAL 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---ML 249
           +  + ++       V +  ++ VG  +     +G+ +A A+     +  + +++T   + 
Sbjct: 139 IAGLRVA------TVSSISLVSVGTLIGNQGALGNLLADAMFYHRPVLAVNSVVTTAVLA 192

Query: 250 GVIFLYDQLLFRPMIVWSN 268
            VI     LL + +  W+ 
Sbjct: 193 IVIDALLVLLRKVLTPWAP 211



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 12/205 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIAS--IIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           F     L   WLG I +     LI +A   ++ +P+G        +   +     +L A 
Sbjct: 5   FDIPSDLQHSWLGLIGLHLREALIPVAVGLLLALPIGQLCVRVRWLYPPVLWVTTILYAV 64

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P+  FF +++           + L++  +      I    + G  + P +    A++  +
Sbjct: 65  PSLAFFVVLIDYTGQSETTVMIPLAVYSLVVLVPAI----VDGVRSVPQETLAAATAMGL 120

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
              R +  + LP   P  + G   A   + +   V  +            LG  +A++  
Sbjct: 121 GPVRRYLQVQLPIAVPALIAGLRVATVSSISLVSVGTLIGNQGA------LGNLLADAMF 174

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
                  V  V+      + ++  L
Sbjct: 175 YHRPVLAVNSVVTTAVLAIVIDALL 199


>gi|260881199|ref|ZP_05403866.2| phosphate ABC transporter, permease protein PstC [Mitsuokella
           multacida DSM 20544]
 gi|260849794|gb|EEX69801.1| phosphate ABC transporter, permease protein PstC [Mitsuokella
           multacida DSM 20544]
          Length = 316

 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 10/158 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
           L   ++S+L       L A          L  ++ P  D+  +IP + +    LT  V Y
Sbjct: 101 LVTTILSVLIGAPLGLLGAIFLAKVAPSWLKNIMRPATDLYVAIPSVVYGYIGLTLLVPY 160

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +          LAA   +    +  +      +L  +P+ LEE S +   + WQ   +
Sbjct: 161 LRDALGATTGFGVLAASLVLAIMIMPTILSISTDALNAVPKPLEEASLALGATWWQTMVH 220

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + VP + PG++  ++++M+      +A +M++     I
Sbjct: 221 VIVPAAAPGILTAVVLAMARAIGETMAVQMLIGNTPQI 258



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 14/163 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
           +V  I++ +I  P+G+             + + ++P   L  A P+ V+         P 
Sbjct: 101 LVTTILSVLIGAPLGLLGAIFLAKVAPSWLKNIMRPATDLYVAIPSVVYGYIGLTLLVPY 160

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +        L  SL++       IL       +A P   +E + +   T W+   +
Sbjct: 161 LRDALGATTGFGVLAASLVLAIMIMPTILSISTDALNAVPKPLEEASLALGATWWQTMVH 220

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +I+P   P  +T  + A   A   ++  ++       + T+ L
Sbjct: 221 VIVPAAAPGILTAVVLAMARAIGETMAVQMLIGNTPQIVTSLL 263


>gi|170290103|ref|YP_001736919.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic component [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174183|gb|ACB07236.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic component [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 242

 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 73/211 (34%), Gaps = 13/211 (6%)

Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
           W  +     +     ++ YI +     D   +     IT++       ++ ++ + +G  
Sbjct: 17  WEAISLPGLLPSPLSTLRYIAS----LDPDLIALHTVITLYNSFAGFSLSMLLSLALGFL 72

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                 I         +  +  A ++  ++VS +      P + ++  +   +   +L  
Sbjct: 73  SHRNEFIRGFSMGICSIFNSTSALIWSLVLVSTIGILSPLPPILVASAV---SLPQLLSA 129

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            IA   +   +  E   S   +    +  +I+PG  P  +  +  A G +   S+V+E  
Sbjct: 130 TIAALDSVDKNLIEAVRSLGGSSANEYLDVIIPGSLPMIIAASRVALGLSLRISVVAEAF 189

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                   + G+G  I  S      P V+  
Sbjct: 190 G------SSGGIGYMIMRSYNLADAPGVLAW 214



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 13/190 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
            +LD   +  +   T     +   +S+L +     L+ ++  +    + I  I  S   L
Sbjct: 37  ASLDPDLIALHTVITLYNSFAGFSLSMLLSLALGFLSHRNEFIRGFSMGICSIFNSTSAL 96

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    V     L P   I    A         +  +  +   +L ++ ++L E  RS  
Sbjct: 97  IWSLVLVSTIGILSPLPPILVASAV-------SLPQLLSATIAALDSVDKNLIEAVRSLG 149

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S   ++  + +P S+P ++    +++       V +E            GIG  I  + 
Sbjct: 150 GSSANEYLDVIIPGSLPMIIAASRVALGLSLRISVVAEAFGSSG------GIGYMIMRSY 203

Query: 234 KEQDLLAILY 243
              D   +L 
Sbjct: 204 NLADAPGVLA 213


>gi|241202904|ref|YP_002974000.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856794|gb|ACS54461.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 388

 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 69/189 (36%), Gaps = 9/189 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L    ++ I+++       L     +L  +++  L ++Q+IP L      ++   
Sbjct: 181 AISHLLLAFGSLAIAVVLGLPLGILCFWVPKLRAIVLQGLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV-VASEMIVVGDTVIPLPGIGSYIALAIKE 235
           WQ    + +P + P ++  + + +      V +A+ +   G  +    G+G      +  
Sbjct: 301 WQILVGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYA 244
             +  + +A
Sbjct: 361 GAVPTVFFA 369



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA ++ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLAFGSLAIAVVLGLPLGILCFWVPKLRAIVLQGLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T W+  
Sbjct: 245 HVPLAAAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRWQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 VGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|20146136|dbj|BAB88955.1| hypothetical protein similar to ABC transporter [Bacillus cereus]
          Length = 151

 Score = 62.2 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 12/136 (8%)

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFP 476
           + P+  +L A P     P+++         PN+  S+ M +  +    +  + +      
Sbjct: 1   VDPYLVVLNAMPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYSAFQEVD 55

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +++ +V  +F    W+ ++ ++LP  FP  ++      G +W   I  E+       +  
Sbjct: 56  SNYIKVMDTFGANKWQCYKQVVLPASFPAXISTLKVNVGLSWVGVIFGELL------VSK 109

Query: 537 TGLGAYIAESTEKGSF 552
            GLG  I+   +  +F
Sbjct: 110 QGLGYLISYGFQVFNF 125



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 14/160 (8%)

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + P L ++ ++P +      +V F       +    + +I              +Y +  
Sbjct: 1   VDPYLVVLNAMPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQ 52

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +  +  +V  +F  + WQ +  + +P S P  +  + +++   W  V+  E++V     
Sbjct: 53  EVDSNYIKVMDTFGANKWQCYKQVVLPASFPAXISTLKVNVGLSWVGVIFGELLV----- 107

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               G+G  I+   +  +   +L ++L    +  L    +
Sbjct: 108 -SKQGLGYLISYGFQVFNFTLVLLSVLLTCVLATLMYVFV 146


>gi|163797107|ref|ZP_02191062.1| phosphate ABC transporter, permease protein PstA [alpha
           proteobacterium BAL199]
 gi|159177623|gb|EDP62176.1| phosphate ABC transporter, permease protein PstA [alpha
           proteobacterium BAL199]
          Length = 444

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +  M I+LL +F    +AA          RL  V+   ++ + ++P + F    +  F+N
Sbjct: 230 ILTMTITLLVSFPVGVMAAVYLEEFAPRNRLTDVIEVNINNLAAVPSIVFGLLGLAVFLN 289

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    A L     +    +  +  +   +L  +P  + E +     S  Q   +  +
Sbjct: 290 FF-GLPRSAPLVGGLVLALMTLPTIIIASRSALKAVPPSIREAAFGLGASPLQVVTHHVL 348

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ M+  
Sbjct: 349 PLAMPGILTGTIIGMAQA 366



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ + I  ++  PVG+           R  ++  I+     LAA P+ VF  L ++    
Sbjct: 230 ILTMTITLLVSFPVGVMAAVYLEEFAPRNRLTDVIEVNINNLAAVPSIVFGLLGLAVFLN 289

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   L++   T   I+    +   A P   +E A     +  +   + +LP
Sbjct: 290 FFGLPRSAPLVGGLVLALMTLPTIIIASRSALKAVPPSIREAAFGLGASPLQVVTHHVLP 349

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVAS 528
              P  +TG I     A   +    +  
Sbjct: 350 LAMPGILTGTIIGMAQALGETAPLLMIG 377


>gi|90413557|ref|ZP_01221548.1| putative ABC-type metal ion transport system,permease component
           [Photobacterium profundum 3TCK]
 gi|90325489|gb|EAS41972.1| putative ABC-type metal ion transport system,permease component
           [Photobacterium profundum 3TCK]
          Length = 228

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L +   +T   + ++ +I              S        R L  VL  +++I +SIP 
Sbjct: 20  LVEALGQTLTMVFASGLIGFALGIPLGVALHLSKEGGQLENRTLNKVLGTVVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +++ 
Sbjct: 79  FIILLVAIIPFTRFIVGSSIGT-AAAIVPLTVGAIPFIARLVEGALLEVPSGLVEAAQAM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG++  + +++
Sbjct: 138 GATPQQIVTKVLLPEALPGIINAITITL 165



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 64/195 (32%), Gaps = 18/195 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    +I   + IP+G+ +             ++  +     +  + P  +   + 
Sbjct: 27  TLTMVFASGLIGFALGIPLGVALHLSKEGGQLENRTLNKVLGTVVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P+   E A +   T  +  
Sbjct: 86  IIPFTRFIVGSSIGTAAAIVPLTVGAIPFIARLVEGALLEVPSGLVEAAQAMGATPQQIV 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  +           + S ++     G +          I    ++     
Sbjct: 146 TKVLLPEALPGIINAITITLVTLVSYSAMAGTVGGGGLGDVG------IRYGYQRFDGTV 199

Query: 555 VVLGVLIMCCFVLAL 569
           +++ V+++   V  +
Sbjct: 200 MMITVVMLVILVQLI 214


>gi|160915027|ref|ZP_02077240.1| hypothetical protein EUBDOL_01035 [Eubacterium dolichum DSM 3991]
 gi|158432826|gb|EDP11115.1| hypothetical protein EUBDOL_01035 [Eubacterium dolichum DSM 3991]
          Length = 415

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 65/148 (43%), Gaps = 19/148 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIP--ILGFLTF 118
           + L  L  +V++LL +      AA          +L   +   ++++  +P  I G +  
Sbjct: 195 SILATLYLIVVALLVSLPLGIAAAIYLREYASKNKLTGWIRSAVEMLSGVPSIIFGLMGV 254

Query: 119 TVVY-----FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           TV++     F       ++G    A+  + T     +  S  ++L  +P+ L + S S  
Sbjct: 255 TVLFPITQLFGATTTNILLGGLTLAVILLPT-----IIRSSEEALIVVPQSLRDASLSLG 309

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            S  Q  + + +P ++PG++  +++S+ 
Sbjct: 310 ASRSQTIFKVVLPNAIPGILTGVLLSIG 337



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 80/206 (38%), Gaps = 21/206 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF-FPLV 437
           ++   + LI++A ++ +P+GI              ++  I+   ++L+  P+ +F    V
Sbjct: 195 SILATLYLIVVALLVSLPLGIAAAIYLREYASKNKLTGWIRSAVEMLSGVPSIIFGLMGV 254

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWR 492
                   L      ++L+   T   IL   I           P   ++ + S   +  +
Sbjct: 255 TVLFPITQLFGATTTNILLGGLTLAVILLPTIIRSSEEALIVVPQSLRDASLSLGASRSQ 314

Query: 493 WWRYIILPGIFPYYVTGAITACG------GAWNASIVSEVASWGHIHLRTTGLGAYIAE- 545
               ++LP   P  +TG + + G       A   ++ + V     +  + T L  +I   
Sbjct: 315 TIFKVVLPNAIPGILTGVLLSIGRVIGESAALIYTMGTYVNDAPQLLSQGTSLAVHIYNI 374

Query: 546 -STEKGSFPEVVLGVLIMCCFVLALN 570
            S+E+ +F       +++  FVL LN
Sbjct: 375 MSSEQPNFELACAISIVILVFVLILN 400


>gi|229541511|ref|ZP_04430571.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           coagulans 36D1]
 gi|229325931|gb|EEN91606.1| phosphate ABC transporter, inner membrane subunit PstC [Bacillus
           coagulans 36D1]
          Length = 317

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 85/213 (39%), Gaps = 21/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  ++   +S+        ++AK  R   +L P+++++  IP + +    L+  V + 
Sbjct: 104 TFLAAIACAPLSIGGAVFMTEISAK--RGQKMLQPVIELLVGIPSVVYGFIGLSVVVPFL 161

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G   G     I          M+ S+  ++  +P  L E S +   + WQ  + +
Sbjct: 162 REHISGSGFGIAAGTIVLAVMILPTVMSLSV-DAIRAVPDSLREASLALGATRWQTTYKV 220

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVIPLPGIGSYI 229
            +  + PGL+  ++  M+  +   +A +M++                 T I   G+G+ +
Sbjct: 221 VLRTARPGLLTAVIFGMARAFGEALAVQMVIGNATVMPRSLFEPASTLTSILTMGMGNTV 280

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             +++   L  +   +L M  V  +  + + R 
Sbjct: 281 MGSVENNALWTLALVLLLMSLVFIIIVRFIGRR 313



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 25/188 (13%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                 +QP  +LL   P+ V+         P +   +S           +L +      
Sbjct: 128 KRGQKMLQPVIELLVGIPSVVYGFIGLSVVVPFLREHISGSGFGIAAGTIVLAVM--ILP 185

Query: 464 ILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            + ++ +    A P+  +E + +   T W+    ++L    P  +T  I     A+  ++
Sbjct: 186 TVMSLSVDAIRAVPDSLREASLALGATRWQTTYKVVLRTARPGLLTAVIFGMARAFGEAL 245

Query: 523 VSEVASWGHIHLR--------------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             ++       +               T G+G  +  S E  +   + L +L+M    + 
Sbjct: 246 AVQMVIGNATVMPRSLFEPASTLTSILTMGMGNTVMGSVENNALWTLALVLLLMSLVFII 305

Query: 569 LNRFLWHP 576
           + RF+   
Sbjct: 306 IVRFIGRR 313


>gi|325497213|gb|EGC95072.1| ABC transporter membrane protein, membrane component [Escherichia
           fergusonii ECD227]
          Length = 216

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 83/213 (38%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLAALTLQHLWLVALAVGLAIIIGIPLGILIVRHKWLATPILGTATLLLTIPSVALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLFGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGSS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DMRMLISGALLICLLAIVLDWLLHRLQVVLTPK 212



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    ++ V + + +A II IP+GI I     +++ I   A LL   P
Sbjct: 5   NYLIDNAGYLAALTLQHLWLVALAVGLAIIIGIPLGILIVRHKWLATPILGTATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S +        ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SVALFGLMIPLFSLFGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 SSDMRMLISGALLICLLAIVLDWLLHR 204


>gi|282897440|ref|ZP_06305442.1| Molybdate ABC transporter, permease protein [Raphidiopsis brookii
           D9]
 gi|281198092|gb|EFA72986.1| Molybdate ABC transporter, permease protein [Raphidiopsis brookii
           D9]
          Length = 633

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 22/193 (11%)

Query: 74  SAMVISLLFTFVYATLA------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--N 125
            A +I+       A          KS   G+++ P++     +P        +++F    
Sbjct: 17  LATLITFFLGIAVAYWMLGYQGKGKSLIEGILISPLI-----LPPTVVGFLLLLFFGKHG 71

Query: 126 LYPGKVIGAELAAIFAIFTSQV------WNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQ 178
           +  G +    +  +F  + + +      + + +         I  +L  V+R+     W+
Sbjct: 72  VAGGVLQSFNITVVFTWYGAAIAATVVSFPLMYRTALGAFNQIDANLLRVARTLGAGEWK 131

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG++    ++ +       A+ M+  G+       I   I  A++  D+
Sbjct: 132 IFWRVSFPLAFPGILAGATLAFARALGEFGATLMLA-GNIPGQTQNIPMAIYFAVEAGDI 190

Query: 239 LAI-LYAMLTMLG 250
                +A+  +  
Sbjct: 191 QEAWFWAVFILSI 203



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 31/225 (13%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-GFRPHISSKIQPFAQLLAAFPANV 432
              L  +W+   T     +  +I   + I V  W+ G++    S I+            +
Sbjct: 2   PQDLSPLWISLKTSG---LATLITFFLGIAVAYWMLGYQGKGKSLIEGIL-----ISPLI 53

Query: 433 FFPLVVSCVSYYHLNP-----------------NLWLSLLMIFGTQWYILFNVIAGA-SA 474
             P VV  +                          + + +      + +++    GA + 
Sbjct: 54  LPPTVVGFLLLLFFGKHGVAGGVLQSFNITVVFTWYGAAIAATVVSFPLMYRTALGAFNQ 113

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              +   VA +     W+ +  +  P  FP  + GA  A   A      + + + G+I  
Sbjct: 114 IDANLLRVARTLGAGEWKIFWRVSFPLAFPGILAGATLAFARALGEFGATLMLA-GNIPG 172

Query: 535 RTTGLGAYIAESTEKGSFPEVVLG---VLIMCCFVLALNRFLWHP 576
           +T  +   I  + E G   E       +L +    + L  F    
Sbjct: 173 QTQNIPMAIYFAVEAGDIQEAWFWAVFILSISLSGVMLTNFWQER 217


>gi|148543424|ref|YP_001270794.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|184152833|ref|YP_001841174.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
 gi|227363573|ref|ZP_03847690.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|325681767|ref|ZP_08161286.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
 gi|148530458|gb|ABQ82457.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri DSM 20016]
 gi|183224177|dbj|BAG24694.1| glycine betaine/choline ABC transporter permease component
           [Lactobacillus reuteri JCM 1112]
 gi|227071369|gb|EEI09675.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM2-3]
 gi|324978858|gb|EGC15806.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           MM4-1A]
          Length = 212

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +     +    +LS++ I+L+   V   L  +  +    L+    ++ SIP   F 
Sbjct: 8   NWPIMLDDVQQHATMVLSSLAIALVIAVVIILLFLRREKWLNSLIYFFSLLYSIPSFAF- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F  L P   +G + A I     S+   +  S    +  +   L EV     ++ 
Sbjct: 67  ------FALLLPISGLGMKTAIIVLTIYSEYV-LLRSFITGIRGVDPQLIEVGVGMGMTS 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  + +P ++P +   + ++++        +  I  G       G+G  +   ++ Q
Sbjct: 120 RQVFRQIQLPQALPAIFSGIQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQ 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ IL+  +  + +  +   ++
Sbjct: 173 QVVPILWGTVLTMALTLICAGIV 195



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + IA +I + + +    R    + +  F  LL + P+  FF L++           
Sbjct: 23  VLSSLAIALVIAVVIILLFLRREKWLNSLIYFFSLLYSIPSFAFFALLLPISGLG----M 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +++   +++ +L + I G         EV     +T  + +R I LP   P   +G
Sbjct: 79  KTAIIVLTIYSEYVLLRSFITGIRGVDPQLIEVGVGMGMTSRQVFRQIQLPQALPAIFSG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   + G       GLG  + E  +      ++ G ++     L  
Sbjct: 139 IQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQQVVPILWGTVLTMALTLIC 191


>gi|295692225|ref|YP_003600835.1| phosphate ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295030331|emb|CBL49810.1| Phosphate ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 295

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 58/140 (41%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++   +ISL      A   A   K   +  ++   + I+ S+P +    F  +
Sbjct: 62  LFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGYL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +         A     F   +  +T ++ +++  +P+D  E   +  LS W+   
Sbjct: 122 LFVVQFGFGFSIISGALALTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIR 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            + +P ++PG++  +++S  
Sbjct: 180 GIVLPAALPGILTGIILSAG 199



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   + H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGDILITGIPHLSWHFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +++  II+  I +   I++        +++ I+   Q+L++ P+ V   F  
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLFGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P D +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|82750980|ref|YP_416721.1| phosphate ABC transporter permease [Staphylococcus aureus RF122]
 gi|82656511|emb|CAI80933.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           RF122]
          Length = 308

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +        +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|332704093|ref|ZP_08424181.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554242|gb|EGJ51286.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 249

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 21/186 (11%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTVVYFMNLYPGK 130
           +  +++            +R  G   +P+ D +    Q+ P +  L   V          
Sbjct: 66  SSGLAVAVGCCLGITV--TRPAGRDFLPVADALASVGQTFPPVAVLALAV--------PM 115

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V       I A+F   ++ +  +    L  +P  + + +R   ++ WQ    + +  +MP
Sbjct: 116 VGFGTEPTIIALFVYGLFPVLRNTVTGLEGVPEGMRDAARGMGMTQWQALSQVELRTAMP 175

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  S       VV +         I   G+G  I   +  ++   +L   L +  
Sbjct: 176 MIMAGVRTS-------VVINIGTATLGATIGAGGLGEPILAGLATRNPAFVLQGALVVGW 228

Query: 251 VIFLYD 256
           +  + D
Sbjct: 229 LAVVVD 234



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 17/184 (9%)

Query: 396 IASIIWIPVGIWIGFR--PHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPN 449
           ++S + + VG  +G            P A  LA+    FP      L V  V +      
Sbjct: 65  MSSGLAVAVGCCLGITVTRPAGRDFLPVADALASVGQTFPPVAVLALAVPMVGFG----T 120

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               + +     + +L N + G    P   ++ A    +T W+    + L    P  + G
Sbjct: 121 EPTIIALFVYGLFPVLRNTVTGLEGVPEGMRDAARGMGMTQWQALSQVELRTAMPMIMAG 180

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + +      G       GLG  I       +   V+ G L++    + +
Sbjct: 181 VRTSVVINIGTATLGATIGAG-------GLGEPILAGLATRNPAFVLQGALVVGWLAVVV 233

Query: 570 NRFL 573
           + +L
Sbjct: 234 DGWL 237


>gi|328542556|ref|YP_004302665.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326412302|gb|ADZ69365.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 247

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++A+ T    +   V+ ++     A        +   L+P + + Q++P+       V
Sbjct: 49  LLEHAAITAYETVLGFVLGIVAGSALALAMWLLPLVRRALLPAVLVTQALPVFAIAPILV 108

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++       K++ A L   FA+ ++         Y  L  +   L +++R +R+  +++ 
Sbjct: 109 LWLGFGLSSKIVMAVLVIFFAVTST--------YYDGLRRLDAGLADLARLYRVGRFREL 160

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            +  +P ++P L   + ++       V A    +VG+ V    G+   +  +        
Sbjct: 161 IHFRIPSALPALASGIRIA------AVFAPIGAIVGEWVGAKGGLAFIMLQSNARMQTDM 214

Query: 241 IL 242
           + 
Sbjct: 215 MF 216



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            +++    IT +  V+  ++  +    + + +   P +   + P   +  A P     P+
Sbjct: 47  GFLLEHAAITAYETVLGFVLGIVAGSALALAMWLLPLVRRALLPAVLVTQALPVFAIAPI 106

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  + +   +  +   L++ F     +      G         ++A  + +  +R   +
Sbjct: 107 LVLWLGFGLSSKIVMAVLVIFFA----VTSTYYDGLRRLDAGLADLARLYRVGRFRELIH 162

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
             +P   P   +G   A   A   +IV E            GL   + +S  +     + 
Sbjct: 163 FRIPSALPALASGIRIAAVFAPIGAIVGEWVG------AKGGLAFIMLQSNARMQTDMMF 216


>gi|187735797|ref|YP_001877909.1| phosphate ABC transporter, inner membrane subunit PstA [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187425849|gb|ACD05128.1| phosphate ABC transporter, inner membrane subunit PstA [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 584

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 21/157 (13%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T +  L   V+      + A    +  R G ++  +   ++ +  +P + F  F + +F+
Sbjct: 336 TFIMTLLMSVLVTPVGVIGAIYLREYARQGALVQAVRICVNNLAGVPSIVFGVFGLGFFV 395

Query: 125 NLYPGKV------------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
               G +                      L A   +    +  +  S  ++L  +PR L 
Sbjct: 396 YYLGGSIDELFYWKKLAVDNTPTFGTSGILWASLTLALMTLPVVIVSTEEALSAVPRGLR 455

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           E + +   S WQ    + +P ++PG++  ++++M+ G
Sbjct: 456 EAALACGASKWQMIKRIILPSALPGVMTGLILAMARG 492



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%)

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +  L V     +  +  LW SL +   T   ++ +     SA P   +E A +   + W+
Sbjct: 408 WKKLAVDNTPTFGTSGILWASLTLALMTLPVVIVSTEEALSAVPRGLREAALACGASKWQ 467

Query: 493 WWRYIILPGIFPYYVTGAITAC 514
             + IILP   P  +TG I A 
Sbjct: 468 MIKRIILPSALPGVMTGLILAM 489


>gi|113866965|ref|YP_725454.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525741|emb|CAJ92086.1| ABC-type transporter, permease component: QAT family [Ralstonia
           eutropha H16]
          Length = 238

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTF 118
           L    +     ++ +M ++L          ++   RR    L+ + ++  ++P       
Sbjct: 38  LLYDVADHLRLVVLSMTLALATGIPAGIALSRPCMRRWADRLMQVFNVGNTVPS------ 91

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L    +   E  AI A++ + +  +  + Y+ L N+   L E +R   ++  Q
Sbjct: 92  --LAVLALALAVLGIGERPAILALWLASLLPIVRNTYEGLRNVSPTLLEAARGIGMTPVQ 149

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
           +   + +P ++P ++  + +++
Sbjct: 150 RLVRVELPNALPVMLAGIRIAL 171



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 8/128 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           VV+ + +A    IP GI +     R      +Q    +    P+     L ++ +     
Sbjct: 49  VVLSMTLALATGIPAGIALSRPCMRRWADRLMQ-VFNVGNTVPSLAVLALALAVLGIGER 107

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L +   +   I+ N   G         E A    +T  +    + LP   P  
Sbjct: 108 ----PAILALWLASLLPIVRNTYEGLRNVSPTLLEAARGIGMTPVQRLVRVELPNALPVM 163

Query: 507 VTGAITAC 514
           + G   A 
Sbjct: 164 LAGIRIAL 171


>gi|115525854|ref|YP_782765.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
 gi|115519801|gb|ABJ07785.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris BisA53]
          Length = 258

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 11/203 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             ++     T     +  I  +++ I  G+  G R      +QP A +L   PA  +  +
Sbjct: 53  GVIVPALAQTAGNAALGWIAGALVGIVAGLLAGLREEAQRALQPVAIILLGVPAIAWVVM 112

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +             +   +   T   +    + G  +       +A  + +      R 
Sbjct: 113 ALLWFGG-----RWAVVFTVAVATGPVVFAAAVEGTRSLDGALARMALVYRVPFLARLRD 167

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +  P +  +     +     +W  S+++E+ +         G+G  +A +       E +
Sbjct: 168 MYGPHMLSHLFPALVATLAMSWKVSVMAELLAG------AGGIGDGLATARAHVDTAETM 221

Query: 557 LGVLIMCCFVLALNRFLWHPLYL 579
             V+++   ++ ++  +  PL  
Sbjct: 222 AWVVLVVGILIVVDLAVLQPLQR 244



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
            +G        +  + +        +    ++T        +   L   V   LA     
Sbjct: 30  AYGSLVLPSLLETAEALVRLTRDGVIVPALAQTAGNAALGWIAGALVGIVAGLLAGLREE 89

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               L P+  I+  +P + ++   +++F         G   A +F +  +    +  +  
Sbjct: 90  AQRALQPVAIILLGVPAIAWVVMALLWF---------GGRWAVVFTVAVATGPVVFAAAV 140

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           +   ++   L  ++  +R+    +   +  P  +  L   ++ +++  W   V +E++  
Sbjct: 141 EGTRSLDGALARMALVYRVPFLARLRDMYGPHMLSHLFPALVATLAMSWKVSVMAELLAG 200

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                   GIG  +A A    D    +  ++ ++G++ + D  + +P+  
Sbjct: 201 AG------GIGDGLATARAHVDTAETMAWVVLVVGILIVVDLAVLQPLQR 244


>gi|226304344|ref|YP_002764302.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229494243|ref|ZP_04388006.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
 gi|226183459|dbj|BAH31563.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229318605|gb|EEN84463.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
          Length = 276

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/234 (10%), Positives = 62/234 (26%), Gaps = 10/234 (4%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +                    L   W+ +      G    +   +V+           
Sbjct: 16  PSVPRRIRLKRPTWFGGAVGICGLIALWWILAAAGVAGGTIPTPWVVVSTMFDDGWSLYG 75

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
               +T    +   +  +++ I + + +   P I       A L    P     P+++  
Sbjct: 76  PNFTVTASGALQGFLWGNLLAITLAVLVVLIPPIEGLATQLAILSYCTPLLALGPIILVV 135

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                         L      +  +   +AG  +      ++ +++    W+ +  + L 
Sbjct: 136 FGG-----RTPTIFLAAMYCFFTTMVGTLAGLRSADKTSLDLVAAYGGGRWQKFTKVQLV 190

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
              P        A   A   +I+ E           +G+G  +  +    + P 
Sbjct: 191 SALPSTFAALKIAAPSAVLGAILGEYLGGVD-----SGIGVALTAAQTSYNVPR 239



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 62/220 (28%), Gaps = 15/220 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +   + +  I+            P  +V  +         P +   T    L   +   
Sbjct: 35  GICGLIALWWILAAAGVAGGTIPTPWVVVSTMFDDGWSLYGPNFTV-TASGALQGFLWGN 93

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           L     A L      +  +   +  +    P+L      +V F    P          IF
Sbjct: 94  LLAITLAVLVVLIPPIEGLATQLAILSYCTPLLALGPIILVVFGGRTP---------TIF 144

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                  +         L +  +   ++  ++    WQKF  + +  ++P     + ++ 
Sbjct: 145 LAAMYCFFTTMVGTLAGLRSADKTSLDLVAAYGGGRWQKFTKVQLVSALPSTFAALKIAA 204

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
                  +  E +   D+     GIG  +  A    ++  
Sbjct: 205 PSAVLGAILGEYLGGVDS-----GIGVALTAAQTSYNVPR 239


>gi|16761105|ref|NP_456722.1| permease transmembrane component [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141199|ref|NP_804541.1| permease transmembrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167551115|ref|ZP_02344870.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168229513|ref|ZP_02654571.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168818132|ref|ZP_02830132.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194446529|ref|YP_002041433.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194470374|ref|ZP_03076358.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197263508|ref|ZP_03163582.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198241930|ref|YP_002216246.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200388215|ref|ZP_03214827.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929129|ref|ZP_03220272.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857597|ref|YP_002244248.1| permease transmembrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213053216|ref|ZP_03346094.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213428236|ref|ZP_03360986.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213581953|ref|ZP_03363779.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213650026|ref|ZP_03380079.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|213852441|ref|ZP_03381973.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|289824259|ref|ZP_06543854.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25306115|pir||AH0777 probable permease transmembrane component STY2392 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503403|emb|CAD02542.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136825|gb|AAO68390.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|194405192|gb|ACF65414.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194456738|gb|EDX45577.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197241763|gb|EDY24383.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936446|gb|ACH73779.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199605313|gb|EDZ03858.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321673|gb|EDZ06872.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205324089|gb|EDZ11928.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205335828|gb|EDZ22592.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205344782|gb|EDZ31546.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206709400|emb|CAR33741.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|320086600|emb|CBY96371.1| Glycine betaine/carnitine/choline transport system permease protein
           opuCB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322615190|gb|EFY12112.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322617781|gb|EFY14677.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624625|gb|EFY21456.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626924|gb|EFY23720.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322634110|gb|EFY30846.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635699|gb|EFY32409.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640166|gb|EFY36830.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646411|gb|EFY42923.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649379|gb|EFY45815.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656499|gb|EFY52788.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661475|gb|EFY57699.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665637|gb|EFY61821.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667161|gb|EFY63328.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671167|gb|EFY67295.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675192|gb|EFY71269.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322680801|gb|EFY76836.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686976|gb|EFY82953.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323192740|gb|EFZ77967.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198828|gb|EFZ83927.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323205162|gb|EFZ90140.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208205|gb|EFZ93149.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210985|gb|EFZ95846.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215770|gb|EGA00513.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220684|gb|EGA05130.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224694|gb|EGA08966.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231215|gb|EGA15330.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233650|gb|EGA17742.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323237720|gb|EGA21780.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323245703|gb|EGA29697.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248933|gb|EGA32857.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252996|gb|EGA36829.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323258672|gb|EGA42334.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259504|gb|EGA43139.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323268287|gb|EGA51762.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271923|gb|EGA55339.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326623996|gb|EGE30341.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|88799389|ref|ZP_01114967.1| Binding-protein-dependent transport systems inner membrane
           component [Reinekea sp. MED297]
 gi|88777928|gb|EAR09125.1| Binding-protein-dependent transport systems inner membrane
           component [Reinekea sp. MED297]
          Length = 293

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 9/203 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
              SL  +   T    L    +  +   + A     +R L    +P +   Q+IPIL   
Sbjct: 85  SKRSLVFHTIVTLQSTLLGFALGTVLGILIAVGIVHNRTLESSFMPWVIASQTIPILAIA 144

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              VV    +    +    + A++  F    + +T  M + L +  R   E+ +++  S 
Sbjct: 145 PIIVVVLGAMSITGIFPKAVIAMYLSF----FPVTIGMVKGLRSADRLHMELMQTYFASS 200

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q FW +    + P L  ++ ++++      + +E+           G+G+ +       
Sbjct: 201 SQLFWKVRWYSAQPYLFASLKIAIASALVGAIVAEL-----PTGSQGGLGARLLSGSYYG 255

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
             + I  A+L    +       +
Sbjct: 256 QTVQIWSALLMASLLGASLVFCV 278



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 72/192 (37%), Gaps = 5/192 (2%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +++   +T+   ++   + +++ I + + I     + S   P+       P     P++
Sbjct: 88  SLVFHTIVTLQSTLLGFALGTVLGILIAVGIVHNRTLESSFMPWVIASQTIPILAIAPII 147

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +    +      +++ ++ + + +   ++ G  +      E+  ++  +  + +  +
Sbjct: 148 VVVLGAMSITGIFPKAVIAMYLSFFPVTIGMVKGLRSADRLHMELMQTYFASSSQLFWKV 207

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
                 PY       A   A   +IV+E+ +         GLGA +   +  G   ++  
Sbjct: 208 RWYSAQPYLFASLKIAIASALVGAIVAELPTG-----SQGGLGARLLSGSYYGQTVQIWS 262

Query: 558 GVLIMCCFVLAL 569
            +L+      +L
Sbjct: 263 ALLMASLLGASL 274


>gi|295399187|ref|ZP_06809169.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978653|gb|EFG54249.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 296

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 5/155 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+++S       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSLGAVLLSTPIALALAIFINFISPKFGSAVLKPVLELLVGIPSVVYGWLGVTILIP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     LA I  +    +  +T     +L  +P    E S     + WQ    
Sbjct: 140 LLRESFGGVGFSLLAGIIVLSVMILPTITSIASDALSAVPFSYLEASYGLGSTRWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + VP +  G+   +++ ++  +   +A +M++   
Sbjct: 200 VIVPAAKTGIFTGIVLGLARAFGEALAVQMVIGNT 234



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           ++  Y  V+++     +++  V++   IA  + I +          S+ ++P  +LL   
Sbjct: 67  SNPKYGAVIFIAGSTLVSLGAVLLSTPIALALAIFINFI--SPKFGSAVLKPVLELLVGI 124

Query: 429 PANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKE 481
           P+ V+  L V+ +      S+  +  +L   ++++       + ++     SA P  + E
Sbjct: 125 PSVVYGWLGVTILIPLLRESFGGVGFSLLAGIIVLSVMILPTITSIASDALSAVPFSYLE 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +     T W+    +I+P       TG +     A+  ++  ++   G+     +GL
Sbjct: 185 ASYGLGSTRWQAISRVIVPAAKTGIFTGIVLGLARAFGEALAVQMV-IGNTVKLPSGL 241


>gi|903304|dbj|BAA09582.1| ORF72 [Bacillus subtilis]
 gi|1303855|dbj|BAA12511.1| YqgH [Bacillus subtilis]
          Length = 309

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 14/210 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +  F+ V G+ + L++G+     P + +  +                     +  ++S L
Sbjct: 46  ITIFLGVKGLQSFLVNGVS----PIEFLTSLNWNPTDSDPKYGVLPFIFGSFAVTILSAL 101

Query: 82  FTFVYATLA------AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYPGKVI 132
                                  VL P+++++  IP +  GF+  TV+  F+  +     
Sbjct: 102 IAAPLGIAGPIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGT 161

Query: 133 GAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           G  L A   + +  +     S+   ++ ++P+ L E S +   + WQ    + VP + P 
Sbjct: 162 GHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPT 221

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           L+  +++ M+  +   +A +M++    V+P
Sbjct: 222 LMTAVVLGMARAFGEALAVQMVIGNTRVLP 251



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 30/212 (14%)

Query: 391 VVLIIIASIIWIPVGIW-------IGFRPHISSKIQPFAQLLAAFPANVF--------FP 435
             + I++++I  P+GI        I         +QP  +LL   P+ V+         P
Sbjct: 93  FAVTILSALIAAPLGIAGPIFMTEIAPN-WGKKVLQPVIELLVGIPSVVYGFIGLTVLVP 151

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            +    S    +  L  ++++       I        ++ P   +E + +   T W+  R
Sbjct: 152 FIAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSYALGATRWQTIR 211

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGA 541
            +++P  FP  +T  +     A+  ++  ++                     + T  +G 
Sbjct: 212 KVLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVLPESPFDTAGTLTTIITLNMGH 271

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               S E  +   + L +L+M    + L R+L
Sbjct: 272 TTYGSVENNTLWSMGLVLLVMSFLFILLIRYL 303


>gi|293400680|ref|ZP_06644825.1| phosphate ABC transporter, permease protein PstA
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305706|gb|EFE46950.1| phosphate ABC transporter, permease protein PstA
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 414

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 62/144 (43%), Gaps = 11/144 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQSIP--ILGFLT 117
           + L  L  ++ISLL                AAK++ +   +   ++++  +P  I G + 
Sbjct: 194 SLLTTLYLIMISLLIALPLGIGAAIYLHEYAAKNK-ITSGIRSAIEMLTGVPSIIFGLMG 252

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++ +    G      L     +    +  +  S  ++L  +P+ L + S S   +  
Sbjct: 253 VAVLFPLTKLAGADTTNVLLGSLTMAIILLPIIIRSCEEALAIVPQTLRDASLSLGANQS 312

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           Q  + + +P ++PG++  +++S+ 
Sbjct: 313 QTIFKIVLPCAVPGILSGVLLSIG 336



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----- 433
           ++   + LI+I+ +I +P+GI              I+S I+   ++L   P+ +F     
Sbjct: 194 SLLTTLYLIMISLLIALPLGIGAAIYLHEYAAKNKITSGIRSAIEMLTGVPSIIFGLMGV 253

Query: 434 ---FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              FPL             L  SL M       I+ +     +  P   ++ + S     
Sbjct: 254 AVLFPLTKLA--GADTTNVLLGSLTMAIILLPIIIRSCEEALAIVPQTLRDASLSLGANQ 311

Query: 491 WRWWRYIILPGIFPYYVTGAITACG------GAWNASIVSEVASWGHIHLRTTGLGAYIA 544
            +    I+LP   P  ++G + + G       A   ++ + V     +  + T L  +I 
Sbjct: 312 SQTIFKIVLPCAVPGILSGVLLSIGRVIGESAALIYTMGTYVNDSPTLLSQGTSLAVHIY 371

Query: 545 E--STEKGSFPEVVLGVLIMCCFVLALNRFL 573
              S+E+ +F       +++  FV  LN  +
Sbjct: 372 NIMSSEQPNFELACAISIVILVFVFMLNLLV 402


>gi|28210159|ref|NP_781103.1| ABC transporter permease protein [Clostridium tetani E88]
 gi|28202595|gb|AAO35040.1| ABC transporter permease protein [Clostridium tetani E88]
          Length = 265

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I+++  ++   I +I+ I + I + +    S  + PF  +L A P     P+
Sbjct: 69  GELFRHIGISLWETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNALPKTALAPI 128

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++           +    L I  T    + +          +  ++  SF  T  +    
Sbjct: 129 LIVWAGAGVKGIVVIAITLSIVTT----ILSAYNYFMNADEEKIKMLKSFGATKGQILTK 184

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           +ILP      +       G +W   IV E        +   G+G  I    +      V+
Sbjct: 185 LILPSNVGNIINIIKINIGLSWVGVIVGEFL------VSRYGIGYLIVYGGQVFKLDLVM 238

Query: 557 LGVLIMCCFVLALNRFL 573
           +GV ++    L + + +
Sbjct: 239 MGVAVLAVCALVMYQIV 255



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 19  IFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           IF L+ F+L   I+    +  +   + P DI  +    +    L ++   +    +    
Sbjct: 28  IFILIIFLLQWEILAKNKIIDVFLFSKPSDIHCLFKEYVKNGELFRHIGISLWETILGFT 87

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           I  +   + A L         +L P L ++ ++P        +V+      G        
Sbjct: 88  IGTILGILIAILLWWFETASKILDPFLVVLNALPKTALAPILIVWAGAGVKG-------- 139

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            +    T  +     S Y    N   +  ++ +SF  +  Q    L +P ++  ++  + 
Sbjct: 140 IVVIAITLSIVTTILSAYNYFMNADEEKIKMLKSFGATKGQILTKLILPSNVGNIINIIK 199

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           +++   W  V+  E +V         GIG  I    +   L  ++  +  +     +  Q
Sbjct: 200 INIGLSWVGVIVGEFLV------SRYGIGYLIVYGGQVFKLDLVMMGVAVLAVCALVMYQ 253

Query: 258 LL 259
           ++
Sbjct: 254 IV 255


>gi|227894586|ref|ZP_04012391.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|315037595|ref|YP_004031163.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           amylovorus GRL 1112]
 gi|227863577|gb|EEJ70998.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|312275728|gb|ADQ58368.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           amylovorus GRL 1112]
 gi|327182891|gb|AEA31338.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           amylovorus GRL 1118]
          Length = 295

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 13/191 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--------SRTTLRML 73
            +   +++GI+ ++L GI    +   I  +    L   +    A          +   ++
Sbjct: 11  TVIIYILVGIVVLILAGILGNILITGIPHLSWHFLTSEASSYQAGGGVRDQLFNSLYLLI 70

Query: 74  SAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              +ISL      A   A   K   +  ++   + I+ S+P +    F  + F+  +   
Sbjct: 71  LTTIISLPIALGAAIYLAEYAKDNWITNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGFG 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 A     F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++P
Sbjct: 131 FSIISGALALTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALP 188

Query: 191 GLVWNMMMSMS 201
           G++  +++S  
Sbjct: 189 GILTGIILSAG 199



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++ ++      +V  +  GI    +   + H ++          Q    V  
Sbjct: 1   MDAKKRDKLATVIIYILVGIVVLILAGILGNILITGIPHLSWHFLTSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +++  II+  I +   I++        I++ I+   Q+L++ P+ V   F  
Sbjct: 61  QLFNSLYLLILTTIISLPIALGAAIYLAEYAKDNWITNLIRTTIQILSSLPSIVVGLFGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P D +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|168236328|ref|ZP_02661386.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194737797|ref|YP_002115251.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194713299|gb|ACF92520.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197290603|gb|EDY29958.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVF 433
             + L     + V +  + A ++ +  GI +        + +P  + +AA    FP    
Sbjct: 45  SFVALALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAV 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             + V  + +      + L L  +      IL   +AG  A P     VAS   ++  + 
Sbjct: 103 LAIAVPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQ 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  T+       + ++         +  + LG  I       +  
Sbjct: 159 LYQVELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTA 211

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+ G L++    + ++R  
Sbjct: 212 YVIQGALLVALAAIIIDRLF 231


>gi|16765492|ref|NP_461107.1| ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167991085|ref|ZP_02572184.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168259501|ref|ZP_02681474.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466162|ref|ZP_02700032.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|16420698|gb|AAL21066.1| putative ABC-type proline/glycine betaine transport system,
           permease component [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|195631281|gb|EDX49841.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205330522|gb|EDZ17286.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205351028|gb|EDZ37659.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|267994224|gb|ACY89109.1| putative ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301158724|emb|CBW18236.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312913153|dbj|BAJ37127.1| putative proline/glycine betaine ABC transporter permease protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|323130488|gb|ADX17918.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332989096|gb|AEF08079.1| putative ABC-type proline/glycine betaine transport system permease
           component [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|46143887|ref|ZP_00133876.2| COG2011: ABC-type metal ion transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 220

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  +++I +S+P    L
Sbjct: 16  TLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVVINIGRSVP-FIIL 74

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 75  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 133

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 134 WQVVRKFYLPESLPILINGITLTL 157



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 44/159 (27%), Gaps = 14/159 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQ 419
           +   T Q    V      T++      ++A ++ +P+G          I   P +   + 
Sbjct: 1   MQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLD 60

Query: 420 PFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               +  + P      V  P     V          + L +     +  L          
Sbjct: 61  VVINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNALLEI 118

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           P    E A S   T W+  R   LP   P  + G     
Sbjct: 119 PAGLTEAAKSMGATNWQVVRKFYLPESLPILINGITLTL 157


>gi|282900749|ref|ZP_06308691.1| Molybdate ABC transporter, permease protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194549|gb|EFA69504.1| Molybdate ABC transporter, permease protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 631

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 77/215 (35%), Gaps = 28/215 (13%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA------AKSRRLGMVLVPILD 105
           +P  L        + RT+     A +I+       A          KS   G+++ P++ 
Sbjct: 1   MPQDLSP---LWISLRTSG---LATLITFFLGIAAAYWMLGYQGKGKSLIEGILISPLI- 53

Query: 106 IMQSIPILGFLTFTVVYFM-NLYPGKVIGAELAAIFAIFTSQV-------WNMTFSMYQS 157
               +P        +++F  + + G+++ +    +   +           + + +     
Sbjct: 54  ----LPPTVVGFLLLLFFGKHGFGGRLLQSFNITVVFTWYGAAIAATVVSFPLMYRTALG 109

Query: 158 -LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
               I  +L  V+R+     W+ FW + +P + PG++    ++ +       A+ MI  G
Sbjct: 110 AFNQIDANLLRVARTLGAGEWKIFWRVSLPLAFPGILAGATLAFARALGEFGATLMIA-G 168

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLG 250
           +       I   I  A++  D      +A+  +  
Sbjct: 169 NIPGQTQNIPMAIYFAVEAGDTQEAWFWAVFILSI 203



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 28/211 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWI-GFRPHISSKIQPFAQLLAAFPANVFFP-----LVV 438
           I++    +  +I   + I    W+ G++    S I+            +  P     L++
Sbjct: 10  ISLRTSGLATLITFFLGIAAAYWMLGYQGKGKSLIEGIL-----ISPLILPPTVVGFLLL 64

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWY------------ILFNVIAGA-SAFPNDFKEVASS 485
                +     L  S  +     WY            +++    GA +    +   VA +
Sbjct: 65  LFFGKHGFGGRLLQSFNITVVFTWYGAAIAATVVSFPLMYRTALGAFNQIDANLLRVART 124

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                W+ +  + LP  FP  + GA  A   A      + + + G+I  +T  +   I  
Sbjct: 125 LGAGEWKIFWRVSLPLAFPGILAGATLAFARALGEFGATLMIA-GNIPGQTQNIPMAIYF 183

Query: 546 STEKGSFPEVVLG---VLIMCCFVLALNRFL 573
           + E G   E       +L +    + L  F 
Sbjct: 184 AVEAGDTQEAWFWAVFILSISLSGIMLTNFW 214


>gi|333031397|ref|ZP_08459458.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           coprosuis DSM 18011]
 gi|332741994|gb|EGJ72476.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides
           coprosuis DSM 18011]
          Length = 399

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 12/209 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----L 116
           +      +   +L A+ + L      + LA K  R    L P+++++  IP + +    L
Sbjct: 178 ILGTLLVSLTAILIALPLGLGVAIYLSELAGK--RTRKFLKPVIELLAGIPSVVYGFFGL 235

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V    N     V          +    +  +      S+ N PR + E S +   + 
Sbjct: 236 VVLVPIVQNWLNLPVGETAFTGSLLLAIMALPTIITVAEDSMRNTPRAVREASLALGATQ 295

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIA 230
           WQ  + + +P++  G+   +++ +       +A  M+     ++      P+  I + IA
Sbjct: 296 WQTIYKVIIPYAKSGISAAVVLGIGRAIGETMAVLMVTGNAAIMPTSLFQPIRSIPATIA 355

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             + E       Y  L +LG I     L+
Sbjct: 356 AELGEAPAGGAHYQSLFLLGCILFVITLI 384



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF------- 433
           +   +++ + A +I +P+G+ +               ++P  +LLA  P+ V+       
Sbjct: 178 ILGTLLVSLTAILIALPLGLGVAIYLSELAGKRTRKFLKPVIELLAGIPSVVYGFFGLVV 237

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+V + ++          SLL+       I+          P   +E + +   T W+
Sbjct: 238 LVPIVQNWLNLPVGETAFTGSLLLAIMALPTIITVAEDSMRNTPRAVREASLALGATQWQ 297

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
               +I+P          +   G A   ++   + +     + T+
Sbjct: 298 TIYKVIIPYAKSGISAAVVLGIGRAIGETMAVLMVTGNAAIMPTS 342


>gi|258651638|ref|YP_003200794.1| binding-protein-dependent transporters inner membrane component
           [Nakamurella multipartita DSM 44233]
 gi|258554863|gb|ACV77805.1| binding-protein-dependent transport systems inner membrane
           component [Nakamurella multipartita DSM 44233]
          Length = 258

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 62/174 (35%), Gaps = 10/174 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY---YHLNPNLWLSLLMIFG 459
           P+G  IG    ++  +   A  L A P+     L+     +     +        +++  
Sbjct: 52  PLGALIGHTGRLTGLVSGVANALRALPSLGLLILLALWGLHTFKGDIALLGPAIAVLVIL 111

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               IL N  AG +      ++ A    +TG +    + LP   P  ++G  +A      
Sbjct: 112 AVPPILSNTYAGIANVDPAARDAARGMGMTGSQVLLRVELPVALPLIMSGLRSAF----- 166

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +     +     +   G G Y+ +   + ++  +V G  ++    +  +R L
Sbjct: 167 --LQVVATATIAAVVALGGFGRYVIDGLAQQNYSMMVAGAFLVAVLAVLGDRIL 218



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 81/202 (40%), Gaps = 12/202 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
            + L Q+   + L +  A+ I          L   + RL  ++  + + ++++P LG L 
Sbjct: 29  WNRLLQHLGYSLLALAIALAI----ALPLGALIGHTGRLTGLVSGVANALRALPSLGLLI 84

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++ ++ + G +     A    +  + V  +  + Y  + N+     + +R   ++G 
Sbjct: 85  LLALWGLHTFKGDIALLGPAIAVLVILA-VPPILSNTYAGIANVDPAARDAARGMGMTGS 143

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P ++P ++  +  +        +          V+ L G G Y+   + +Q+
Sbjct: 144 QVLLRVELPVALPLIMSGLRSAF-------LQVVATATIAAVVALGGFGRYVIDGLAQQN 196

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              ++     +  +  L D++L
Sbjct: 197 YSMMVAGAFLVAVLAVLGDRIL 218


>gi|210612304|ref|ZP_03289252.1| hypothetical protein CLONEX_01453 [Clostridium nexile DSM 1787]
 gi|210151678|gb|EEA82685.1| hypothetical protein CLONEX_01453 [Clostridium nexile DSM 1787]
          Length = 214

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 11/175 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  I +A II + +GIWI      ++     A +    PA     +++      +    +
Sbjct: 30  MTAICLAGIIGLLLGIWISEHEWAAAPTLGIANIFYTIPAISLLGMLIPLFGIGNTTAVI 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  I      ++ N  AG     ++    A     T  +    I LP      + G 
Sbjct: 90  ALTLYGIM----PMVRNTYAGMKGVSSEIISAAEGMGSTKLQLMMKIKLPLALDVIIAGI 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
                   N  +++   +     +   GLG  I              G L++   
Sbjct: 146 R-------NMVVMTISVAAIASFIGAGGLGVAIYRGITMYDTAMTFGGSLVIAAV 193



 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 59/186 (31%), Gaps = 15/186 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
                  ++A+ ++ +   +     ++        + I +I  +IP +  L   +  F  
Sbjct: 23  LEHIGLSMTAICLAGIIGLLLGIWISEHEWAAAPTLGIANIFYTIPAISLLGMLIPLFGI 82

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                       A+ A+    +  M  + Y  +  +  ++   +     +  Q    + +
Sbjct: 83  GNT--------TAVIALTLYGIMPMVRNTYAGMKGVSSEIISAAEGMGSTKLQLMMKIKL 134

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++  ++  +          VV +  +    + I   G+G  I   I   D        
Sbjct: 135 PLALDVIIAGIR-------NMVVMTISVAAIASFIGAGGLGVAIYRGITMYDTAMTFGGS 187

Query: 246 LTMLGV 251
           L +  V
Sbjct: 188 LVIAAV 193


>gi|323702459|ref|ZP_08114123.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532598|gb|EGB22473.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum nigrificans DSM 574]
          Length = 310

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 69/157 (43%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF---TVVYFM 124
           + L +L +  +SL+       +A        +L P ++++  IP + +       +V F+
Sbjct: 97  SLLAVLISAPLSLITAVFMVEIA--PGWGQRILQPTIELLSGIPSVVYGYIGLSVLVPFI 154

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             + G +  + LA +  +    +  +      SL ++P  L+E + +   + WQ    + 
Sbjct: 155 REHLGGLGFSLLAGVLVLSVMVIPTIVSVSVDSLRSLPGHLKEAAYALGSTRWQTIRLVL 214

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  GL+  +++ ++  +   +A +M++     I 
Sbjct: 215 LPAARTGLITGIILGLARAFGEALAVQMVIGNTRKIA 251



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 82/221 (37%), Gaps = 25/221 (11%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++      ++  V++   ++ I  +  V I  G        +QP  +LL+  P+ V+  +
Sbjct: 89  FIFGSVATSLLAVLISAPLSLITAVFMVEIAPG---WGQRILQPTIELLSGIPSVVYGYI 145

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHIT 489
            +S +          L  +L   +L++       + +V +    + P   KE A +   T
Sbjct: 146 GLSVLVPFIREHLGGLGFSLLAGVLVLSVMVIPTIVSVSVDSLRSLPGHLKEAAYALGST 205

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL---------- 539
            W+  R ++LP      +TG I     A+  ++  ++       +  + L          
Sbjct: 206 RWQTIRLVLLPAARTGLITGIILGLARAFGEALAVQMVIGNTRKIAHSLLDPTITLTSGI 265

Query: 540 ----GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
               G   A S    +   + L +L+M  F + L + +   
Sbjct: 266 TMDMGYTAAGSLWNNTLWSMALVLLLMSFFFILLIKMVVKR 306


>gi|283785925|ref|YP_003365790.1| ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282949379|emb|CBG88990.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 17/200 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVF 433
             + L     + V +  + A +I +  GI +       ++ +P  + LAA    FP    
Sbjct: 45  SFVALALAHFWLVGISSLFAVLIGVGAGIAV--TRPGGAEFRPLVETLAAAGQTFPPVAV 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             + V  + +      + L L  I      +L   +AG  A P   ++VAS   ++  + 
Sbjct: 103 LAIAVPVMGFGQQPAIIALILYGIL----PVLQATLAGLGAIPLSVRDVASGMGMSRGQQ 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R + LP   P  + G  T+       + ++         +  + LG  I       +  
Sbjct: 159 LRKVELPLAAPVILAGVRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTA 211

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+ G L++    + ++R  
Sbjct: 212 YVIQGALLVALAAIVVDRLF 231



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 21/201 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTV 120
           A      +  + + ++L          +         P+++ +    Q+ P +  L   V
Sbjct: 50  ALAHFWLVGISSLFAVLIGVGAGIAVTRPGGAE--FRPLVETLAAAGQTFPPVAVLAIAV 107

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
                         +  AI A+    +  +  +    L  IP  + +V+    +S  Q+ 
Sbjct: 108 PVMG--------FGQQPAIIALILYGILPVLQATLAGLGAIPLSVRDVASGMGMSRGQQL 159

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  +  S+         +  +           +G+ I + +   +   
Sbjct: 160 RKVELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAY 212

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           ++   L +     + D+L  R
Sbjct: 213 VIQGALLVALAAIVVDRLFER 233


>gi|25026723|ref|NP_736777.1| putative transport system permease protein [Corynebacterium
           efficiens YS-314]
 gi|23492002|dbj|BAC16977.1| putative transport system permease protein [Corynebacterium
           efficiens YS-314]
          Length = 232

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 82/202 (40%), Gaps = 16/202 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               L A+++SL         A + R  G +L P++ ++ +IP L       V F     
Sbjct: 19  LWLTLPAVLLSLAIAIPLGWTAHRWRIGGALL-PLVGVLYAIPSLPLFVLVPVLFGTGLR 77

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             V    +  ++ +       +T ++     ++P  + + + +   S  ++FW +  P +
Sbjct: 78  SPVTMVAVLTLYGVAI-----LTRTVADGFSSVPLHVRKAATAVGYSSARRFWSVEFPLA 132

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P ++  +          VV++  +V   +V+ +  +G+      +   +  ++  ++  
Sbjct: 133 LPVIIAGLR-------VVVVSTVSLVTVGSVVGIQSLGTLFTDGFQRGIIAEVVTGVVLT 185

Query: 249 LGVIFLYD---QLLFRPMIVWS 267
           + +  + D    L  R ++ WS
Sbjct: 186 IALALILDACCVLAQRLLLPWS 207



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 9/197 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
           Q+  +V+ L  I ++  +  ++++  I IP+G W   R  I   + P   +L A P+   
Sbjct: 6   QNYPWVLELTWIHLWLTLPAVLLSLAIAIPLG-WTAHRWRIGGALLPLVGVLYAIPSLPL 64

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           F LV         +P   +++L ++G        V  G S+ P   ++ A++   +  R 
Sbjct: 65  FVLVPVLFGTGLRSPVTMVAVLTLYGVAILTR-TVADGFSSVPLHVRKAATAVGYSSARR 123

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  +  P   P  + G         +   V  V            LG    +  ++G   
Sbjct: 124 FWSVEFPLALPVIIAGLRVVVVSTVSLVTVGSVVGIQS-------LGTLFTDGFQRGIIA 176

Query: 554 EVVLGVLIMCCFVLALN 570
           EVV GV++     L L+
Sbjct: 177 EVVTGVVLTIALALILD 193


>gi|327194588|gb|EGE61439.1| putative proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CNPAF512]
          Length = 388

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 74/203 (36%), Gaps = 9/203 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L  L ++ I+++       L     RL  V++  L ++Q+IP L      ++   
Sbjct: 181 AISHLLLALGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + + +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q    + +P + P ++  + + +        +A+ +   G  +    G+G      +  
Sbjct: 301 RQILVGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  + +A  + + +  + D +
Sbjct: 361 GAMPTVFFAFSSAVILDAVIDSI 383



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +  + IA I+ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLALGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T  +  
Sbjct: 245 HVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRRQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 VGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAMP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|148242462|ref|YP_001227619.1| ABC-type phosphate transport system permease component
           [Synechococcus sp. RCC307]
 gi|147850772|emb|CAK28266.1| ABC-type phosphate transport system permease component
           [Synechococcus sp. RCC307]
          Length = 318

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 20/191 (10%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++ + + V    A     L   + PIL  + ++  LG++ F     +   PG +     
Sbjct: 126 LLAAIPSVVLGLWAIF--VLEPFVRPILMAIHNV--LGWIPFFST--VPSGPGVMP---- 175

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+F +    +  +T     SL  +P+DL + +     + W     + VP ++ G++  +
Sbjct: 176 -AVFILTIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGI 234

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL---AIKEQDLLAILYAMLT 247
           M+++       +A  MI+   T        PG  I S IA       E  + A++YA L 
Sbjct: 235 MLALGRAMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALV 294

Query: 248 MLGVIFLYDQL 258
           ++ + FL + L
Sbjct: 295 LMIITFLVNVL 305



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 395 IIASIIWIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           ++A+I  + +G+W      P +   +     +L   P            S     P +  
Sbjct: 126 LLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGWIP----------FFSTVPSGPGVMP 175

Query: 453 SLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           ++ ++      I+  +     +  P D ++ A     T W     +++P      + G +
Sbjct: 176 AVFILTIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIM 235

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGL--GAYIAE--STEKGSFPEVVLGVLIMCCFVL 567
            A G A   ++   +          +    G  IA   + + G   E+ +  L+    VL
Sbjct: 236 LALGRAMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVL 295

Query: 568 ALNRFLWHPLYLYGTRCLRL 587
            +  FL + L  +  R L L
Sbjct: 296 MIITFLVNVLAQWIVRRLAL 315


>gi|52081033|ref|YP_079824.1| phosphate ABC transporter permease [Bacillus licheniformis ATCC
           14580]
 gi|52786410|ref|YP_092239.1| hypothetical protein BLi02674 [Bacillus licheniformis ATCC 14580]
 gi|319645010|ref|ZP_07999243.1| PstA protein [Bacillus sp. BT1B_CT2]
 gi|52004244|gb|AAU24186.1| phosphate ABC transporter (permease) [Bacillus licheniformis ATCC
           14580]
 gi|52348912|gb|AAU41546.1| PstA [Bacillus licheniformis ATCC 14580]
 gi|317392819|gb|EFV73613.1| PstA protein [Bacillus sp. BT1B_CT2]
          Length = 295

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 9/218 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASR 67
           ++ R+   +F L+A V+   ++ +  + I        +  +   +  +     +      
Sbjct: 5   VTDRLATGVFGLIAAVIAAILVGLFAYIIINGVSHISLSFLTSRSSALSSGGGIRDQLFN 64

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMV---LVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  M+I++          A+      +   +   ++++ S+P +    F ++ F+
Sbjct: 65  SFYILVLTMLITVPLGVGGGIYMAEYAPANKLTDFIRVCIEVLSSLPSIVMGMFGMLMFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL          A    IF   V  M      ++ ++P++ +E S +  +S W     + 
Sbjct: 125 NLTGWGYSIIGGALALTIFNLPV--MVRVTEDAIRSVPKEQKEASLALGVSKWHTIKTVL 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++P ++   +++ SG  F   A+ +   G T   L
Sbjct: 183 IPGAVPSIITGAILA-SGRVFGEAAALLFTAGLTTPRL 219



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----------DVLYVIWLGCITMF 388
           R++  +      V+  + +G+    I   V+H +                +      + +
Sbjct: 8   RLATGVFGLIAAVIAAILVGLFAYIIINGVSHISLSFLTSRSSALSSGGGIRDQLFNSFY 67

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYH 445
            +V+ ++I   + +  GI++      +          ++L++ P+     +V+       
Sbjct: 68  ILVLTMLITVPLGVGGGIYMAEYAPANKLTDFIRVCIEVLSSLPS-----IVMGMFGMLM 122

Query: 446 LNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                     +I G     +FN             + P + KE + +  ++ W   + ++
Sbjct: 123 FVNLTGWGYSIIGGALALTIFNLPVMVRVTEDAIRSVPKEQKEASLALGVSKWHTIKTVL 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
           +PG  P  +TGAI A G  + 
Sbjct: 183 IPGAVPSIITGAILASGRVFG 203


>gi|85703030|ref|ZP_01034134.1| ABC transporter, permease [Roseovarius sp. 217]
 gi|85671958|gb|EAQ26815.1| ABC transporter, permease [Roseovarius sp. 217]
          Length = 590

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 69/488 (14%), Positives = 157/488 (32%), Gaps = 35/488 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-----GFLTFT 119
             RT +  ++  V+  L  +  A     +      ++ +  I+  +  L      ++   
Sbjct: 67  LVRTVIAGITVTVLCFLLGYPLAYAINMTTGTKRTVMLLFVIVPYLTSLLVRTYAWIVML 126

Query: 120 --------VVYFMNLY--PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                    + F+ L   P +++    AA   +    +  M   +   +  + + L   +
Sbjct: 127 GDGGLVNKTMIFIGLTDRPVQILYTSTAAYVGMVHIMLPFMVLPILSVMNGVDKRLIPAA 186

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +S     ++ F  + +P ++PG+    ++       F +    +     V+    I   +
Sbjct: 187 KSMGCPPFRAFLRVFLPLTVPGIRSGCILVFILAIGFYITPAALGGLSDVLLSELIEIQV 246

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289
           + A+  +   A  + +L +  +  L             +  R     G     S     F
Sbjct: 247 SQAMNFRLAAAAAFVLLVITALFLLI-------FGADVSSTRTGLVGGDTGRFSGRGVGF 299

Query: 290 RKTN-FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
           R     L  +  +       L+   K L R    + F        L     V  +  +  
Sbjct: 300 RWARSLLAPLAAAEVMRKRRLAQWQKSLYRRDPFLAFR-----PGLLMTYAVLCLGFLIL 354

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI----WLGCI--TMFRVVVLIIIASIIWI 402
             +V  V    +   + +  +  + Q          W+  +  +++   +  ++A  + +
Sbjct: 355 PSLVVLVMSFSSDPFLSFPPSGLSMQWYEEFFTDPSWIAALGKSVYVACISTLLACGLGV 414

Query: 403 PVGIWIGFRPHISSKIQPFA-QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
                +   P +S+ + P     +      V   L    V +  +  +  L      G  
Sbjct: 415 LAAYALDRSPTLSNYLMPLLLTPIIVPIVVVGVALYGGYVDWGLIGTDAGLIFAHTLGGI 474

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            YI+  V A  + F    +  A S     +  +R I LP I    + GAI A   +++  
Sbjct: 475 SYIVIIVSATLAGFDRRLERAALSMKAHPFTAFRRITLPLIQYGIIAGAIFAFIHSFDEV 534

Query: 522 IVSEVASW 529
           +V+     
Sbjct: 535 VVATFIGG 542



 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 70/199 (35%), Gaps = 9/199 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
            L F+++  ++ +++    +  +      +          D   +     ++      + 
Sbjct: 348 CLGFLILPSLVVLVMSFSSDPFLSFPPSGLSMQWYEEFFTDPSWI-AALGKSVYVACIST 406

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +++     + A    +S  L   L+P+   + +  I+  +   V  +       +IG + 
Sbjct: 407 LLACGLGVLAAYALDRSPTLSNYLMPL---LLTPIIVPIVVVGVALYGGYVDWGLIGTDA 463

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             IFA     +  +   +  +L    R LE  + S +   +  F  + +P    G++   
Sbjct: 464 GLIFAHTLGGISYIVIIVSATLAGFDRRLERAALSMKAHPFTAFRRITLPLIQYGIIAGA 523

Query: 197 MMSMSGGWFFVVASEMIVV 215
           + +    +  VV +  I  
Sbjct: 524 IFAFIHSFDEVVVATFIGG 542



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 72/268 (26%), Gaps = 20/268 (7%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
             +R   P     L +   V+++   F   ++      I W  I        +    Y+ 
Sbjct: 6   RTLRDRLPRLGPALLALPAVAFVFAFFALPMLDLFLASIGWPDISLASYTEFFTRGGYLP 65

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            L   T+   + + ++  ++  P+   I         +     ++    + +        
Sbjct: 66  VLVR-TVIAGITVTVLCFLLGYPLAYAINMTTGTKRTVMLLFVIVPYLTSLLVRTYAWIV 124

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-------------------ASAFPNDFKE 481
           +       N  +  + +      IL+   A                     +        
Sbjct: 125 MLGDGGLVNKTMIFIGLTDRPVQILYTSTAAYVGMVHIMLPFMVLPILSVMNGVDKRLIP 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S     +R +  + LP   P   +G I     A    I           L +  +  
Sbjct: 185 AAKSMGCPPFRAFLRVFLPLTVPGIRSGCILVFILAIGFYITPAALGGLSDVLLSELIEI 244

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            ++++            +L++    L +
Sbjct: 245 QVSQAMNFRLAAAAAFVLLVITALFLLI 272


>gi|311696278|gb|ADP99151.1| phosphate ABC transporter, permease protein PstA [marine bacterium
           HP15]
          Length = 424

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 55/150 (36%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
               +      + L M   +++S       A      A   +    +   ++ + ++P +
Sbjct: 198 SKAGILGAIVGSLLTMFVTLILSFPIGVAAAIYLEEFAPQNKFTDFIEVNINNLAAVPSI 257

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+NL+ G      +     +    +  +  S   ++ ++P  + E +    
Sbjct: 258 IFGLLGLAVFINLF-GMPRSVPVVGGLVLTLMTLPTIIISSRAAIKSVPPSIREAAEGIG 316

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q   +  +P +MPG++   ++ M+  
Sbjct: 317 ASKMQVVLHHVLPLAMPGMLTGSIIGMAQA 346



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 6/145 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFP 435
           ++     ++  + V +I++  I +   I++      +            LAA P+ +F  
Sbjct: 202 ILGAIVGSLLTMFVTLILSFPIGVAAAIYLEEFAPQNKFTDFIEVNINNLAAVPSIIFGL 261

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++        P    +   L++   T   I+ +  A   + P   +E A     +  +
Sbjct: 262 LGLAVFINLFGMPRSVPVVGGLVLTLMTLPTIIISSRAAIKSVPPSIREAAEGIGASKMQ 321

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG+I     A
Sbjct: 322 VVLHHVLPLAMPGMLTGSIIGMAQA 346


>gi|13471601|ref|NP_103167.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14022343|dbj|BAB48953.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 259

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 63/180 (35%), Gaps = 9/180 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+   ++ S       I     P +   + P   +++A P     P++V    +   +  
Sbjct: 68  VIFGYVVGSGAGFITAILADRVPFLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSK- 126

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              + ++I  T + +L N +AG +A  +  +++  ++    W     + LP   P+    
Sbjct: 127 ---AAVVIIMTFFPMLVNTVAGLAASGHMERDLMRTYASGYWPTLIKLRLPAAAPFIFNA 183

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  A   +IV+E            G+G  I+    + +   V   + +        
Sbjct: 184 LKINSTLALIGAIVAEFFG-----TPVVGMGFRISTEVGRMNIDMVWAEIAVAALAGSVF 238



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R I P IF     ++   +             P  I   +  +L V  L     +T  + 
Sbjct: 10  RLIIPAIFGAWILIIWEAVTRGAGIPFILLPPPSAIGARIAGSLPV--LGADVRQTIFKA 67

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   V+     F+ A LA +   L   L+PI +++ ++PI+G     V++F   +  K 
Sbjct: 68  VIFGYVVGSGAGFITAILADRVPFLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSKA 127

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++    W     L +P + P 
Sbjct: 128 A--------VVIIMTFFPMLVNTVAGLAASGHMERDLMRTYASGYWPTLIKLRLPAAAPF 179

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTM 248
           +   + ++ +      + +E         P+ G+G  I+  +   ++    A +      
Sbjct: 180 IFNALKINSTLALIGAIVAEFFGT-----PVVGMGFRISTEVGRMNIDMVWAEIAVAALA 234

Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271
             V +    L+ R +  W    R
Sbjct: 235 GSVFYGVVALVERAVTFWHPSVR 257


>gi|228476156|ref|ZP_04060864.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           hominis SK119]
 gi|314936467|ref|ZP_07843814.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           hominis subsp. hominis C80]
 gi|228269979|gb|EEK11459.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           hominis SK119]
 gi|313655086|gb|EFS18831.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           hominis subsp. hominis C80]
          Length = 306

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 67/188 (35%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A +++  ++   L        P         T     +    + T   M++ + IS++
Sbjct: 41  VFALIVLAALLIQTLVKGVGHLTPEFFTSFSSSTPSQAGIKGALAGTLWLMITIIPISII 100

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      A+       +   +  +  +P + F    +  F+     + +      
Sbjct: 101 LGVGTAIYLEEYARDNMFTSFVKICISNLAGVPSIVFGLLGLTLFVRGAGIESLSLGNTV 160

Query: 139 IFAIFTSQV---WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           I A  T  +     +  S  +++  +P  + E S     + WQ    + +P ++PG++  
Sbjct: 161 IAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGGNKWQTIRKVVLPAALPGILTG 220

Query: 196 MMMSMSGG 203
            ++S+S  
Sbjct: 221 FILSLSRA 228



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 75/208 (36%), Gaps = 16/208 (7%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
           +      +   N+ + +   +F   V+  + I    + +G++   F             I
Sbjct: 21  NLSSRDKKNSLNKWLFFACIVFALIVLAALLIQTLVKGVGHLTPEFFTSFSSSTPSQAGI 80

Query: 386 ------TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPL 436
                 T++ ++ +I I+ I+ +   I++         +S ++     LA  P+ VF  L
Sbjct: 81  KGALAGTLWLMITIIPISIILGVGTAIYLEEYARDNMFTSFVKICISNLAGVPSIVFGLL 140

Query: 437 VVSCVSYYHL-------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
            ++              N  +  +L M       I+ +      A PN  +E +      
Sbjct: 141 GLTLFVRGAGIESLSLGNTVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGGN 200

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGA 517
            W+  R ++LP   P  +TG I +   A
Sbjct: 201 KWQTIRKVVLPAALPGILTGFILSLSRA 228


>gi|197251458|ref|YP_002147133.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197215161|gb|ACH52558.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVACGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VA    ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVACGMGMSRRQQLYQV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|126208387|ref|YP_001053612.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae L20]
 gi|126097179|gb|ABN74007.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 225

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  +++I +S+P    L
Sbjct: 21  TLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVVINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVRKFYLPESLPILINGITLTL 162



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 14/163 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    V      T++      ++A ++ +P+G          I   P + 
Sbjct: 2   WDSFMQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVVINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
               P    E A S   T W+  R   LP   P  + G     
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVRKFYLPESLPILINGITLTL 162


>gi|290968576|ref|ZP_06560114.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781229|gb|EFD93819.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 217

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           + Q    T + +  + VI+ +           S +        +  +L  I++I++SIP 
Sbjct: 9   MLQGIQETLIMVCVSTVIAAIIGIPLGITLVTSSKGHILQNAVVHQILSAIVNIIRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   A +     +  + ++  +  S+ ++   L E + S 
Sbjct: 68  FIILMVAIIPFTRIVAGTSIGTTAACVPLTIVAVPF-LSRLVETSIRDVDFGLVEAAESM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S +Q    + +P ++P ++ N+
Sbjct: 127 GASPFQIIRKVLLPEALPTIINNI 150



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 14/139 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVF---- 433
           T+  V V  +IA+II IP+GI +             +   +     ++ + P  +     
Sbjct: 16  TLIMVCVSTVIAAIIGIPLGITLVTSSKGHILQNAVVHQILSAIVNIIRSIPFIILMVAI 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P                + L ++       L               E A S   + ++ 
Sbjct: 76  IPFTRIVAGTSIGTTAACVPLTIVAVPFLSRLVETS--IRDVDFGLVEAAESMGASPFQI 133

Query: 494 WRYIILPGIFPYYVTGAIT 512
            R ++LP   P  +     
Sbjct: 134 IRKVLLPEALPTIINNITV 152


>gi|253579199|ref|ZP_04856469.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849297|gb|EES77257.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 301

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 77/188 (40%), Gaps = 12/188 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  VL   ++  L+  I    VP    D+  +T +  +L      + +      V+SL+
Sbjct: 43  LLGAVLTFALLFFLIGYILVKGVPYLSTDLFSLTYNSENL--SLLPSLINTFILTVVSLV 100

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                   AA        K  +L  V+    + +  IP + +  F +++F+      +  
Sbjct: 101 IAAPLGIFAAIYLVEYAKKGSKLVNVIRITAETLSGIPSIVYGLFGMLFFVTALHWGL-- 158

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + L+  F +    +  +  +  ++L ++P    E S        +  + + +P ++PG++
Sbjct: 159 SLLSGAFTLVIMILPLIMRTAEEALKSVPDSYREASFGLGAGKLRTIFTIVLPSAVPGIL 218

Query: 194 WNMMMSMS 201
             +++++ 
Sbjct: 219 AGVILAIG 226



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 79/245 (32%), Gaps = 17/245 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +  F ++  +   I  + + Y+                  ++    +L +++ +I  
Sbjct: 44  LGAVLTFALLFFLIGYILVKGVPYLSTDLFSLTYNSENLSLLPSLINTFILTVVSLVIAA 103

Query: 403 PVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLS 453
           P+GI+              + + I+  A+ L+  P+ V+    +       H   +L   
Sbjct: 104 PLGIFAAIYLVEYAKKGSKLVNVIRITAETLSGIPSIVYGLFGMLFFVTALHWGLSLLSG 163

Query: 454 LLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +      ++         + P+ ++E +        R    I+LP   P  + G I 
Sbjct: 164 AFTLVIMILPLIMRTAEEALKSVPDSYREASFGLGAGKLRTIFTIVLPSAVPGILAGVIL 223

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGA-------YIAESTEKGSFPEVVLGVLIMCCF 565
           A G     +      +     +    +G+           S E     +     +++  F
Sbjct: 224 AIGRVIGETAALIYTAGTVAEVPKNLMGSGRTLALHMYVLSGEGLHMNQASATAVVILAF 283

Query: 566 VLALN 570
           VL +N
Sbjct: 284 VLVIN 288


>gi|164687348|ref|ZP_02211376.1| hypothetical protein CLOBAR_00989 [Clostridium bartlettii DSM
           16795]
 gi|164603772|gb|EDQ97237.1| hypothetical protein CLOBAR_00989 [Clostridium bartlettii DSM
           16795]
          Length = 280

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 75/183 (40%), Gaps = 6/183 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++   L++ I+  +         P  +      + +   LP     T   +L +++++  
Sbjct: 24  IITVGLLVVIVGFIFIKGMAKISPNFLFADYSASGNGGILP-MIMTTVYMVLVSILVATP 82

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              + A      AK  +L  V+    + +  IP + +  F  ++F+     K+  + L+ 
Sbjct: 83  IGILAAVYLQEYAKQGKLVRVIRFATECLAGIPSIVYGLFGGIFFVVAL--KLQYSILSG 140

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  S  ++L  +P    E S     + +Q  + + +P ++PG++  +++
Sbjct: 141 GLTVAIIILPTIIRSTEEALKTVPDTYREASLGLGATKFQTLYKVILPSAIPGILSGVIL 200

Query: 199 SMS 201
           S+ 
Sbjct: 201 SIG 203



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 73/180 (40%), Gaps = 11/180 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +    V      G+A  S  ++   ++      ++ +   T++ V+V I++A+ I I 
Sbjct: 27  VGLLVVIVGFIFIKGMAKISPNFLFADYSASGNGGILPMIMTTVYMVLVSILVATPIGIL 86

Query: 404 VGIWI---GFRPHISSKIQPFAQLLAAFPANVF-----FPLVVSCVSYYHLNPNLWLSLL 455
             +++     +  +   I+   + LA  P+ V+        VV+    Y +        +
Sbjct: 87  AAVYLQEYAKQGKLVRVIRFATECLAGIPSIVYGLFGGIFFVVALKLQYSILSGGLTVAI 146

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I  T   I+ +        P+ ++E +     T ++    +ILP   P  ++G I + G
Sbjct: 147 IILPT---IIRSTEEALKTVPDTYREASLGLGATKFQTLYKVILPSAIPGILSGVILSIG 203


>gi|299821894|ref|ZP_07053782.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299817559|gb|EFI84795.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 308

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +      + + +     A  AA        R    +L P+++++  IP + +   
Sbjct: 84  ALPMIIGSFGVTLFAAVIAAPLAIGAAVFMVEISPRFGKRILQPVMELLVGIPSVVYGFI 143

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +      G   G   A +           + S+  ++  +P    + S +   
Sbjct: 144 GLSVVVPFIREHIAGSGFGIAAATVVLTVMILPTVTSLSV-DAIKAVPTSYRQASLALGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  W + +  +  GL+  ++  M+  +   +A +M++                 T I
Sbjct: 203 TRWQTIWRVILRSARSGLLTAVVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 262

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M  V  L  + + R 
Sbjct: 263 LTMGMGNTVMGTLDNNVLWSLAMVLLAMSLVFILIIRFIGRR 304



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 75/210 (35%), Gaps = 27/210 (12%)

Query: 394 IIIASIIWIPVGI-----WIGFRPHIS-SKIQPFAQLLAAFPANVFFPLVVSCVSYY--- 444
            + A++I  P+ I      +   P      +QP  +LL   P+ V+  + +S V  +   
Sbjct: 95  TLFAAVIAAPLAIGAAVFMVEISPRFGKRILQPVMELLVGIPSVVYGFIGLSVVVPFIRE 154

Query: 445 ---HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                   +  + +++       + ++ +    A P  +++ + +   T W+    +IL 
Sbjct: 155 HIAGSGFGIAAATVVLTVMILPTVTSLSVDAIKAVPTSYRQASLALGATRWQTIWRVILR 214

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------------GLGAYIAES 546
                 +T  +     A+  ++  ++       + T+              G+G  +  +
Sbjct: 215 SARSGLLTAVVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSILTMGMGNTVMGT 274

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
            +      + + +L M    + + RF+   
Sbjct: 275 LDNNVLWSLAMVLLAMSLVFILIIRFIGRR 304


>gi|225352857|ref|ZP_03743880.1| hypothetical protein BIFPSEUDO_04491 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156311|gb|EEG69880.1| hypothetical protein BIFPSEUDO_04491 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 337

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 94  FTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF-LNTILYVVVGAGGATLLAIMGGYGL 152

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +  +L    W  ++    + + +   
Sbjct: 153 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLM 212

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  + LP + P  VT A+      W N  +   +
Sbjct: 213 WIFSEQAVPTELLEAARVDGASEFRTFFQVSLPLLAPGIVTTALFTIVATWNNYFLPLIM 272

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 273 LKDSNWYPLTIGLNQWKDQASTAG 296



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 125 RWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 184

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R    S ++ F+
Sbjct: 185 LFAKLNLTNTP----WAMIIPSLVSTFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFF 240

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 241 QVSLPLLAPGIVTTALFTIVATWN 264


>gi|253583355|ref|ZP_04860553.1| phosphate ABC transporter, inner membrane subunit PstA
           [Fusobacterium varium ATCC 27725]
 gi|251833927|gb|EES62490.1| phosphate ABC transporter, inner membrane subunit PstA
           [Fusobacterium varium ATCC 27725]
          Length = 280

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 75/198 (37%), Gaps = 8/198 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
             +IF N+   +  + ++ +  I+ + I +           ++    +    +      T
Sbjct: 8   GEKIFENVIKAVGIISILPVFLIIGYIIYKGLPAISWEFLTEMPKNGMREGGIFPAIIGT 67

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               +  +V+S+ F           AK   L  ++   +  +  IP + +  F +  F+ 
Sbjct: 68  IYLTIGTIVVSVPFGIFTGIYLVEYAKDNLLTRIINLTIINLAGIPSIIYGLFGMALFVI 127

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                V     +    I    V  +  S  +SL  IP  L E S +   + W+    + +
Sbjct: 128 FLGFDVSIVSGSLTLGIMCLPV--IITSTRESLLAIPNHLREASLALGATKWETITKVVL 185

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++PG++  +++S+S  
Sbjct: 186 PAALPGILTGVILSISRA 203



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 8/187 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV---LYVIWLGCITMFRVVVLII 395
           +   ++ I    ++ G  I     +I +       ++      +      T++  +  I+
Sbjct: 17  KAVGIISILPVFLIIGYIIYKGLPAISWEFLTEMPKNGMREGGIFPAIIGTIYLTIGTIV 76

Query: 396 IASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNL 450
           ++    I  GI++        ++  I      LA  P+ ++  F + +  +        +
Sbjct: 77  VSVPFGIFTGIYLVEYAKDNLLTRIINLTIINLAGIPSIIYGLFGMALFVIFLGFDVSIV 136

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +       I+ +      A PN  +E + +   T W     ++LP   P  +TG 
Sbjct: 137 SGSLTLGIMCLPVIITSTRESLLAIPNHLREASLALGATKWETITKVVLPAALPGILTGV 196

Query: 511 ITACGGA 517
           I +   A
Sbjct: 197 ILSISRA 203


>gi|56412924|ref|YP_149999.1| permease [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197361855|ref|YP_002141491.1| permease [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56127181|gb|AAV76687.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093331|emb|CAR58779.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 243

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAVVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 13/194 (6%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           L     + V +  + A ++ +  GI +           ++  A +   FP      + V 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAVVGQTFPPVAVLAIAVP 108

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + +      + L L  +      IL   +AG  A P     VAS   ++  +    + L
Sbjct: 109 VMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQVEL 164

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  + G  T+       + ++         +  + LG  I       +   V+ G 
Sbjct: 165 PLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGA 217

Query: 560 LIMCCFVLALNRFL 573
           L++    + ++R  
Sbjct: 218 LLVALAAIIIDRLF 231


>gi|312977936|ref|ZP_07789682.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus CTV-05]
 gi|310895243|gb|EFQ44311.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus CTV-05]
          Length = 295

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 69/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L         R +            +      +   ++   +ISL  
Sbjct: 20  IVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRDQLFNSIYLLILTTIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A   A   K   +  ++   + I+ S+P +       + F+  +         A  
Sbjct: 80  ALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLLGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   + H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGDILITGIPHLSWRFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +++  II+  I +   I++        +++ I+   Q+L++ P+ V      
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWVTNLIRTTIQILSSLPSIVVGLLGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P D +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|315604479|ref|ZP_07879544.1| ABC superfamily ATP binding cassette transporter [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315313806|gb|EFU61858.1| ABC superfamily ATP binding cassette transporter [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 521

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 14/180 (7%)

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +    + A  A+   R   +  PIL + Q+IP++      V++       K        I
Sbjct: 72  IAVGMLLAFAASLWPRAARIAAPILVVSQTIPLIAVAPLMVIWMGFSITSK--------I 123

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +     + +  ++ + +   P  L +       S      +  +P++   L   + ++
Sbjct: 124 VVVAVFTAFPVALALLRGINLTPGALTDPLAVAGASRAWIMIHARLPWAHAHLFSGIRIA 183

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +  +     +E +          G+G ++  A        +     T++ +  L   L+
Sbjct: 184 ATYAFASAATAEFMG------AKRGLGVFLLSAQASFRTDLVFAGAGTLVVMTLLLYGLV 237



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 58/188 (30%), Gaps = 10/188 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T    +  +     + + +       P  +    P   +    P     PL+V  + +  
Sbjct: 60  TAAEGMAGMAAGIAVGMLLAFAASLWPRAARIAAPILVVSQTIPLIAVAPLMVIWMGFSI 119

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            +  + +++     T + +   ++ G +  P    +  +    +      +  LP    +
Sbjct: 120 TSKIVVVAVF----TAFPVALALLRGINLTPGALTDPLAVAGASRAWIMIHARLPWAHAH 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G   A   A+ ++  +E            GLG ++  +        V  G   +   
Sbjct: 176 LFSGIRIAATYAFASAATAEFMG------AKRGLGVFLLSAQASFRTDLVFAGAGTLVVM 229

Query: 566 VLALNRFL 573
            L L   +
Sbjct: 230 TLLLYGLV 237


>gi|114764238|ref|ZP_01443476.1| ABC polyamine/opine transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114543390|gb|EAU46406.1| ABC polyamine/opine transporter, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 562

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +L ++        +     +I  +   I A+    +  M   MY  +  IP      ++S
Sbjct: 410 VLVWIGLV----ADEQRLTMINNQFGTIVAMTHILLPFMILPMYSVMSTIPPSYVRAAKS 465

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              + W  FW +  P S+PG+    ++       + +  E++            G++I+ 
Sbjct: 466 LGATNWTTFWRVYFPQSIPGIGAGSILVFILSIGYYITPEIVGGTT--------GTFISN 517

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            I      ++ + +   LG I L   LL 
Sbjct: 518 RIAYHISSSLNWGLAAALGTILLAVVLLL 546



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +  S  P  +   A S   T 
Sbjct: 411 LVWIGLVADEQRLTMINNQFGTIVAMTHILLPFMILPMYSVMSTIPPSYVRAAKSLGATN 470

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S   G
Sbjct: 471 WTTFWRVYFPQSIPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 530

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ L
Sbjct: 531 ----LAAALGTILLAVVLL 545


>gi|215425002|ref|ZP_03422921.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis T92]
 gi|215432735|ref|ZP_03430654.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis EAS054]
 gi|308232557|ref|ZP_07416453.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu001]
 gi|308369222|ref|ZP_07416985.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu002]
 gi|308371443|ref|ZP_07424992.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu003]
 gi|308372645|ref|ZP_07429359.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu004]
 gi|308374974|ref|ZP_07442270.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu007]
 gi|308376219|ref|ZP_07438064.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu008]
 gi|308378459|ref|ZP_07482660.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu009]
 gi|308379610|ref|ZP_07486894.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu010]
 gi|308380797|ref|ZP_07491111.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu011]
 gi|308213638|gb|EFO73037.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu001]
 gi|308328371|gb|EFP17222.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu002]
 gi|308328776|gb|EFP17627.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu003]
 gi|308332618|gb|EFP21469.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu004]
 gi|308347899|gb|EFP36750.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu007]
 gi|308351767|gb|EFP40618.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu008]
 gi|308352550|gb|EFP41401.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu009]
 gi|308356501|gb|EFP45352.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu010]
 gi|308360449|gb|EFP49300.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu011]
          Length = 262

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ Y++    +   + +    C  +    V +  +++I +PVG+ IG     +  +   
Sbjct: 29  QALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGA 88

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V         P + L LL I      +L +  AG ++      +
Sbjct: 89  VNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPS----LLASTYAGIASVDPLVVD 144

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P  + G  +A       ++     +    +    GLG 
Sbjct: 145 AARAMGMTESQVLLRVEVPNALPLMLGGLRSA-------TLQVVATATVAAYASLGGLGG 197

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +  ++  F   ++G +++    L L+  L
Sbjct: 198 YLIDGIKERRFHIALVGAMMVAALALTLDGLL 229



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L             A+  S L       L   + R  +++V  ++ ++++P      
Sbjct: 43  PVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNGLRALP------ 96

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L            + A+    + ++  S Y  + ++   + + +R+  ++  
Sbjct: 97  --TLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMTES 154

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + VP ++P ++  +           +             L G+G Y+   IKE+ 
Sbjct: 155 QVLLRVEVPNALPLMLGGLR-------SATLQVVATATVAAYASLGGLGGYLIDGIKERR 207

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               L   + +  +    D LL
Sbjct: 208 FHIALVGAMMVAALALTLDGLL 229


>gi|300782369|ref|YP_003762660.1| proline/glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299791883|gb|ADJ42258.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 232

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 73/181 (40%), Gaps = 15/181 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +  ++ Q          +A+ I L+ +   A ++ + R    V++     +  IP L
Sbjct: 23  VDRNADAIVQRLVEHISLTGAALGIGLVVSIGLAVVSLRYRWSYPVILGTAGALYVIPSL 82

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G     V +F   +        ++A+  + T  +  +  ++   +  +P ++ E +    
Sbjct: 83  GAFAVLVPFFGLTF--------VSAMIPLATYTLLILIRNIVTGVDQVPNEVREAAVGMG 134

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +  +  W + +P ++P ++  + ++       V  + M+ +G       G+G +I   I
Sbjct: 135 YTRGKLLWQIELPLALPVVIAGLRVAAVTTIGLVTVTSMLGLG-------GLGYFIRAGI 187

Query: 234 K 234
           +
Sbjct: 188 Q 188



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
             + I  ++ I + +           I   A  L   P+   F ++V       ++  + 
Sbjct: 43  AALGIGLVVSIGLAVVSLRYRWSYPVILGTAGALYVIPSLGAFAVLVPFFGLTFVSAMIP 102

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           L+   +      ++ N++ G    PN+ +E A     T  +    I LP   P  + G  
Sbjct: 103 LATYTLLI----LIRNIVTGVDQVPNEVREAAVGMGYTRGKLLWQIELPLALPVVIAGLR 158

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            A         V+ +   G       GLG +I
Sbjct: 159 VAAVTTIGLVTVTSMLGLG-------GLGYFI 183


>gi|257467689|ref|ZP_05631785.1| ABC transporter permease protein [Fusobacterium ulcerans ATCC
           49185]
 gi|317061983|ref|ZP_07926468.1| methionine uptake transporter family protein [Fusobacterium
           ulcerans ATCC 49185]
 gi|313687659|gb|EFS24494.1| methionine uptake transporter family protein [Fusobacterium
           ulcerans ATCC 49185]
          Length = 215

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 20/210 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSI 110
             +      T   +  +   SLL  F    L   ++        +L  VL  I++ ++S 
Sbjct: 4   SMILDSTLETLYMVFFSTFFSLLMGFPIGILLVITKEGNILEKPKLNKVLEIIINTLRSF 63

Query: 111 PILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           P   F+   +  F ++           AAI  +  S    +   +  +L  + R L E S
Sbjct: 64  P---FIILMICLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDRGLIEAS 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY- 228
            S   S     W + +P +MP ++  + ++       V++          I   G+G   
Sbjct: 121 SSMGASNSTIIWKVMIPETMPHIIHGITVT-------VISLIGFSAMAGTIGAGGLGDLA 173

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           I    +      ++Y+++ ++ ++ +   L
Sbjct: 174 IRFGYQRFKTDIMIYSVIVIILLVQVLQSL 203



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           ++     T++ V      + ++  P+GI +          +P ++  ++     L +FP 
Sbjct: 6   ILDSTLETLYMVFFSTFFSLLMGFPIGILLVITKEGNILEKPKLNKVLEIIINTLRSFPF 65

Query: 431 NVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA-FPNDFKEVASSFHI 488
            +    L                +++ +  +    +  +I GA         E +SS   
Sbjct: 66  IILMICLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDRGLIEASSSMGA 125

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAEST 547
           +       +++P   P+ + G           S ++         +   GLG   I    
Sbjct: 126 SNSTIIWKVMIPETMPHIIHGITVTVISLIGFSAMA-------GTIGAGGLGDLAIRFGY 178

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
           ++     ++  V+++   V  L
Sbjct: 179 QRFKTDIMIYSVIVIILLVQVL 200


>gi|209547755|ref|YP_002279672.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533511|gb|ACI53446.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 388

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 73/203 (35%), Gaps = 9/203 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L    ++ I+++       L     RL  +++  L ++Q+IP L      ++   
Sbjct: 181 AISHLLLAFGSLAIAIILGLPLGVLCFWVPRLRAIVLQGLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + + +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q    + +P + P ++  + + +        +A+ +   G  +    G+G      +  
Sbjct: 301 RQILTGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  + +A  + + +  + D +
Sbjct: 361 GAVPTVFFAFSSAVILDAVIDSI 383



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +      + IA I+ +P+G+   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLAFGSLAIAIILGLPLGVLCFWVPRLRAIVLQGLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T  +  
Sbjct: 245 HVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRRQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 TGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|315655082|ref|ZP_07907984.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii ATCC 51333]
 gi|315490563|gb|EFU80186.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii ATCC 51333]
          Length = 358

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 67/166 (40%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LT 117
           +   + +     +VI+  F    A        R    +  P +++   IP + +    LT
Sbjct: 134 FILGSLMTCFLGLVIATPFAVGAAVFITEIAPRAGECLFRPAVELFLGIPSVVYGWVGLT 193

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             V +  + +   + G  + A   +    ++  +T     ++  +P D  E +     + 
Sbjct: 194 VLVPFIRDYFHASLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPYDYREAAYGLGSTR 253

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ   ++ +P +  G++  +++ +S  +   +A  M++    V+P+
Sbjct: 254 WQSICHIVLPAARKGILTGIILGLSRAFGEALAVAMVIGKTRVLPV 299



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 76/226 (33%), Gaps = 24/226 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISS-KIQPFAQLLA 426
              T +  +  +     ++    + ++IA+   +   ++I    P       +P  +L  
Sbjct: 121 PDLTLRGSVGALIFILGSLMTCFLGLVIATPFAVGAAVFITEIAPRAGECLFRPAVELFL 180

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
             P+ V+         P +           ++  + +++    +  +  V     +A P 
Sbjct: 181 GIPSVVYGWVGLTVLVPFIRDYFHASLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPY 240

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-- 535
           D++E A     T W+   +I+LP      +TG I     A+  ++   +       L   
Sbjct: 241 DYREAAYGLGSTRWQSICHIVLPAARKGILTGIILGLSRAFGEALAVAMVIGKTRVLPVD 300

Query: 536 --------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   TT + A +  +T  G     +     M   +  ++ F 
Sbjct: 301 ILSPTSSLTTAITADMGNTTNGGEHNSALW---TMALLLFLISMFF 343


>gi|163741308|ref|ZP_02148700.1| ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10]
 gi|161385661|gb|EDQ10038.1| ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10]
          Length = 281

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              +QD    I  G ++ + +     +   I +           +   + P    +AA P
Sbjct: 77  PILWQDFQQTILKGALSGYIIGCGAALLMAIAVD------RSDFLRRGLLPVGNFVAALP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F        N +AG        +++  ++  +
Sbjct: 131 IVGTAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLRETSAMQRDLMQTYAAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I+ S  +
Sbjct: 187 YWQSFFKLRLPAALPFVFNGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQ 241

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
            +   V   +L+      A 
Sbjct: 242 LALDMVWAEILVAALAGSAF 261



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 92/242 (38%), Gaps = 16/242 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   ++   ++  L   +     P  I      +L +  L Q   +T L+  L
Sbjct: 35  LVPAIFGVTLLIVWELLVRGLEVSLVILPAPSMIAARFATSLPI--LWQDFQQTILKGAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  +I      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 93  SGYIIGCGAALLMAIAVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F +          +    L        ++ +++  S WQ F+ L +P ++P + 
Sbjct: 153 VVVMVFFPV--------LVNTVAGLRETSAMQRDLMQTYAASYWQSFFKLRLPAALPFVF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +      + +E         P  G+G  I+ ++ +  L  +   +L       
Sbjct: 205 NGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEILVAALAGS 259

Query: 254 LY 255
            +
Sbjct: 260 AF 261


>gi|291456228|ref|ZP_06595618.1| putative ABC-type sugar transport system, permease component
           [Bifidobacterium breve DSM 20213]
 gi|291381505|gb|EFE89023.1| putative ABC-type sugar transport system, permease component
           [Bifidobacterium breve DSM 20213]
          Length = 332

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G ++     IV  FTYQ  ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 89  FTSTFGLGFGKSFALWDNIVTVFTYQGGIFGRWL-VNTLLYVVVGAGGATLLAIMGGYAL 147

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   L    W  ++    + + +   
Sbjct: 148 AKFRFPGRKAVFAVIIGSISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 207

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  I LP + P  VT A+      W N  +   +
Sbjct: 208 WIFSEQAVPTELLEAARVDGASEFRTFWTISLPLLAPGIVTTALFTIVATWNNYFLPLIM 267

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 268 LKDADWYPLTIGLNQWKDQASTAG 291



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 120 RWLVNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGSISVPGIALAVPQFL 179

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R    S ++ FW
Sbjct: 180 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFW 235

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 236 TISLPLLAPGIVTTALFTIVATWN 259


>gi|224367299|ref|YP_002601462.1| PstA1 [Desulfobacterium autotrophicum HRM2]
 gi|223690015|gb|ACN13298.1| PstA1 [Desulfobacterium autotrophicum HRM2]
          Length = 425

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 65/159 (40%), Gaps = 8/159 (5%)

Query: 73  LSAMVISLLFTFVYATLAAK-------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++++L+ +F     +A        + R    +   ++ + ++P + F    +  F+N
Sbjct: 211 FFTLLVTLILSFPIGVASAVYLEEFAPTNRWTDFIEVNINNLAAVPSIVFGLLGLAVFLN 270

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    + +   F +    +  +  +   SL ++P  + E +     S  Q   +  +
Sbjct: 271 FF-GLPRSSPMVGGFVLTLMTLPTIIIAGRASLKSVPPSIREAALGVGASKIQMVTHHVL 329

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           P +MPG++   ++ M+          MI +   ++ +PG
Sbjct: 330 PLAMPGMLTGTIIGMAQALGETAPLLMIGMVAFIVDIPG 368



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 77/215 (35%), Gaps = 19/215 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            ++  +    C + F ++V +I++  I +   +++         +  I+     LAA P+
Sbjct: 198 PELAGIWGAACGSFFTLLVTLILSFPIGVASAVYLEEFAPTNRWTDFIEVNINNLAAVPS 257

Query: 431 NVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            VF  L ++    +   P    +    ++   T   I+    A   + P   +E A    
Sbjct: 258 IVFGLLGLAVFLNFFGLPRSSPMVGGFVLTLMTLPTIIIAGRASLKSVPPSIREAALGVG 317

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA------ 541
            +  +   + +LP   P  +TG I     A   +    +       +   G G       
Sbjct: 318 ASKIQMVTHHVLPLAMPGMLTGTIIGMAQALGETAPLLMIGMVAFIVDIPG-GFSDPSTV 376

Query: 542 -----YIA-ESTEKGSFPEVVLGVLIMCCFVLALN 570
                ++  +S E+         ++++  F++ +N
Sbjct: 377 LPVQIFLWADSPERAFLERTSAAIMVLLLFLITMN 411


>gi|251797496|ref|YP_003012227.1| binding-protein-dependent transporters inner membrane component
           [Paenibacillus sp. JDR-2]
 gi|247545122|gb|ACT02141.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. JDR-2]
          Length = 258

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 18/255 (7%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P++  L+ F+L    +++    + E  +P     +  +    H L   A  T    L 
Sbjct: 10  VWPSLL-LVIFILASWQLSVDSGVVPEWQLPSPTSIVKEMFDVWHRLMDNAWATVELALI 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
                     + A +      +   + P+L + Q++P++       ++       K+I  
Sbjct: 69  GFGGGAAAGIIIAAILHLIPFVRRAVYPLLVVTQNVPVIAIGPILTIWLGYGVLPKLILV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +   F +  + +            +    L    R      WQ F  L +P ++  L  
Sbjct: 129 WIVCFFPVSVAML--------NGFKDTDPTLRNYMRMIGAGDWQLFTRLELPNAVTHLFS 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            + ++ S      V +E +          G+G Y+ L+ K  +   +  ++  ++ +   
Sbjct: 181 GLKIAASYAVLSAVVAEWLG------ADKGLGHYMILSSKGYEPARVFASVFLIVALSLA 234

Query: 255 ---YDQLLFRPMIVW 266
                 L+ R +I W
Sbjct: 235 LFGLVALIERLVIRW 249



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 19/174 (10%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P +   + P   +    P     P++   + Y      L   +L+     + +   ++ G
Sbjct: 88  PFVRRAVYPLLVVTQNVPVIAIGPILTIWLGYG----VLPKLILVWIVCFFPVSVAMLNG 143

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                   +          W+ +  + LP    +  +G   A   A  +++V+E      
Sbjct: 144 FKDTDPTLRNYMRMIGAGDWQLFTRLELPNAVTHLFSGLKIAASYAVLSAVVAEWLGADK 203

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNRFL--WHP 576
                 GLG Y+  S++      V   V ++          V  + R +  W P
Sbjct: 204 ------GLGHYMILSSKGYEPARVFASVFLIVALSLALFGLVALIERLVIRWRP 251


>gi|296117920|ref|ZP_06836503.1| osmoprotectant ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969151|gb|EFG82393.1| osmoprotectant ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 214

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 16/198 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +   A + T  +L +++++L+   V A L +   R   +   +  I  ++P L  L 
Sbjct: 12  WQDITFRAYQHTSLVLQSVLLALVIALVIAVLVSSHHRATAIANSLSSIGLTLPSLALLG 71

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F            + ++  +    V  +  +    L NI   + E +R   +S  
Sbjct: 72  LAIPLFGIG--------TIPSVVLVVFYAVLPILRNAIVGLQNIDTAIIESARGQGMSPA 123

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
              + + +P + P ++  + +S       V A     +G      PG+GSYI   + +  
Sbjct: 124 AVLFRVRLPLAWPVIMTGVRVSTQMS-MGVAAIAAYALG------PGLGSYIFSGLSQIG 176

Query: 238 LLAIL-YAMLTMLGVIFL 254
               L YA +  +G++ +
Sbjct: 177 GANALNYAFVGTIGIVII 194



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 60/177 (33%), Gaps = 11/177 (6%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I+  F       + +        V+  +++A +I + + + +      ++     + +  
Sbjct: 3   ILGEFIIDRWQDITFRAYQHTSLVLQSVLLALVIALVIAVLVSSHHRATAIANSLSSIGL 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P+     L +           +   +L++F     IL N I G         E A   
Sbjct: 63  TLPSLALLGLAIPLFGIG----TIPSVVLVVFYAVLPILRNAIVGLQNIDTAIIESARGQ 118

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++       + LP  +P  +TG   +   +   + ++  A          GLG+YI
Sbjct: 119 GMSPAAVLFRVRLPLAWPVIMTGVRVSTQMSMGVAAIAAYALG-------PGLGSYI 168


>gi|163736163|ref|ZP_02143582.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
 gi|161390033|gb|EDQ14383.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
          Length = 281

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              +QD    I  G ++ + +     +   I +           +   + P    +AA P
Sbjct: 77  PILWQDFQQTILKGALSGYIIGCGAALLMAIAVD------RSDFLRRGLLPVGNFVAALP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F        N +AG        +++  ++  +
Sbjct: 131 IVGTAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLRETSAMQRDLMQTYAAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+ +  + LP   P+   G   +   A   +IV+E          T G+G  I+ S  +
Sbjct: 187 YWQSFFKLRLPAALPFVFNGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQ 241

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
            +   V   +L+      A 
Sbjct: 242 LALDMVWAEILVAALAGSAF 261



 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 92/242 (38%), Gaps = 16/242 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-ML 73
           + P IF +   ++   ++  L   +     P  I      +L +  L Q   +T L+  L
Sbjct: 35  LVPAIFGVTLLIVWELLVRGLEVSLVILPAPSVIAARFATSLPI--LWQDFQQTILKGAL 92

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           S  +I      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K   
Sbjct: 93  SGYIIGCGAALLMAIAVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAV 152

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F +          +    L        ++ +++  S WQ F+ L +P ++P + 
Sbjct: 153 VVVMVFFPV--------LVNTVAGLRETSAMQRDLMQTYAASYWQSFFKLRLPAALPFVF 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +S +      + +E         P  G+G  I+ ++ +  L  +   +L       
Sbjct: 205 NGLKISTTLALVGAIVAEFFGS-----PTVGMGFRISTSVGQLALDMVWAEILVAALAGS 259

Query: 254 LY 255
            +
Sbjct: 260 AF 261


>gi|318076798|ref|ZP_07984130.1| ABC transporter permease [Streptomyces sp. SA3_actF]
          Length = 228

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L  ++IS L     A +     R G + V + +I +++P         V  +
Sbjct: 31  LLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLANIGRAVPTFA------VLVL 84

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       +E   + A+    V  +  + Y  +  + R++   +R   ++G Q  W + 
Sbjct: 85  LLLTPVGRLSEGPTVIALVLFAVPPLLTNAYVGMRGVDREVVRAARGMGMTGRQLLWRVE 144

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  + ++
Sbjct: 145 LPLAAPLVLTGVRIA 159



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   +V ++I+ ++ +PV + +G      +     A
Sbjct: 11  TWDWLSDPAHWSGENGIAHRLLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLA 70

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++       L+    +  L++F     +L N   G      +    
Sbjct: 71  NIGRAVPTFAVL-VLLLLTPVGRLSEGPTVIALVLF-AVPPLLTNAYVGMRGVDREVVRA 128

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 129 ARGMGMTGRQLLWRVELPLAAPLVLTGVRIAA 160


>gi|313884811|ref|ZP_07818563.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619502|gb|EFR30939.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 209

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 76/196 (38%), Gaps = 15/196 (7%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y  +     L+A+  + +  F  A  A++ +    ++  +   ++ IP L  L   + + 
Sbjct: 19  YVGQHIGLSLTALGAAFILAFSLAYWASRHQLSRQMIFFLAQGLRVIPSLAVLFIMIPFL 78

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  ++        A+    +  +  +M      +P  L+E   +  +S  Q F  +
Sbjct: 79  GVGRTPALL--------ALVFLALPPLIMNMTLGFMEVPAVLKETGLAMGMSSGQLFKRV 130

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P ++  + +++      ++AS  +    T I   G+GS I   +    +  ++ 
Sbjct: 131 TLPLALPHILTGIKLAL----VEIIASATLA---TYIGAGGLGSLIVTGLGLYRMDLLVI 183

Query: 244 AMLTMLGVIFLYDQLL 259
              ++  +      L+
Sbjct: 184 GGGSVAILSLFSLILM 199



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 5/176 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +  A I+   +  W          I   AQ L   P+     +++  +        L
Sbjct: 28  LTALGAAFILAFSLAYWASRHQLSRQMIFFLAQGLRVIPSLAVLFIMIPFLGVGRTPALL 87

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L  L        ++ N+  G    P   KE   +  ++  + ++ + LP   P+ +TG 
Sbjct: 88  ALVFLA----LPPLIMNMTLGFMEVPAVLKETGLAMGMSSGQLFKRVTLPLALPHILTGI 143

Query: 511 ITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             A      +A++ + + + G   L  TGLG Y  +    G     +L +  +   
Sbjct: 144 KLALVEIIASATLATYIGAGGLGSLIVTGLGLYRMDLLVIGGGSVAILSLFSLILM 199


>gi|308068351|ref|YP_003869956.1| ABC transporter permease yqgH [Paenibacillus polymyxa E681]
 gi|305857630|gb|ADM69418.1| Probable ABC transporter permease protein yqgH [Paenibacillus
           polymyxa E681]
          Length = 301

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 21/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  L A  +SL        +  KS +   +L P ++++  IP + +    LT  V   
Sbjct: 89  TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 146

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            N++ G+ IG  LA    +    +  +T  M  +L ++P  L E S +   + WQ    +
Sbjct: 147 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 205

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--------------GSYI 229
            +P  +P L+  +++ M+  +   +A +M++     IP   +              G+  
Sbjct: 206 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIPHSLLESASTLTSVITLSMGNTA 265

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
             ++    L ++   +L M  +  L  +LL R 
Sbjct: 266 MGSVHNNALWSMALVLLLMTFIFVLLVRLLERR 298



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 39/296 (13%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI-----VNHF 371
              +   R ++ E   ++ ++  V +++ +    V    + G+A  ++  +         
Sbjct: 6   RSRVMKERHYWEEWTGRIYTSVCVVFLVAVIVSIVYFVASKGVATFAVNGVSLREFFFGT 65

Query: 372 TYQDVLYVIWLGCITMFRVVVLI-IIASIIWIPVGIWIGFR------PHISSKIQPFAQL 424
            +         G +        + I+A++I  P+ +                 +QP  +L
Sbjct: 66  KWSPDGEPKSFGALPFITGSFAVTILAALIASPLSLCAALFMTEIVPKSGKRILQPAIEL 125

Query: 425 LAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASA 474
           L+  P+ V+         PL+ +      +       +L  MI  T   I+       S+
Sbjct: 126 LSGIPSVVYGFVGLTVIVPLLRNVFGGQGIGILAGCLVLSVMILPTITSIM---ADALSS 182

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P   +E + +   T W+    +I+P + P  +TG I     A+  ++  ++      H+
Sbjct: 183 LPGGLRESSYALGATRWQTIARVIIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHI 242

Query: 535 RTTGL--------------GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
             + L              G     S    +   + L +L+M    + L R L   
Sbjct: 243 PHSLLESASTLTSVITLSMGNTAMGSVHNNALWSMALVLLLMTFIFVLLVRLLERR 298


>gi|227879332|ref|ZP_03997197.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256849103|ref|ZP_05554536.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-1A-US]
 gi|262047583|ref|ZP_06020538.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-3A-US]
 gi|312977937|ref|ZP_07789683.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus CTV-05]
 gi|227861076|gb|EEJ68730.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256713879|gb|EEU28867.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-1A-US]
 gi|260572159|gb|EEX28724.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-3A-US]
 gi|310895244|gb|EFQ44312.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus CTV-05]
          Length = 331

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 16/210 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDI---VPITLDVHSLPQYASRTTLRM--LSAM 76
           +L  VLV+ II  + +    T V   +  I        D      +     + +      
Sbjct: 60  VLIIVLVVSIIGFVGYHGLATFVSDHVNVIHFLTSTDWDPGEGKNHVGAAVMIVTSFLVT 119

Query: 77  VISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           +++ L    +A   A       S++    L  + +++  IP + +    LT  V     L
Sbjct: 120 LLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELLVGIPSVVYGFLGLTIIVPVIRKL 179

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G   G  LAA  A+F   +  +T     SL  +P    + S +   + WQ  +++ + 
Sbjct: 180 FGGTGFGI-LAATLALFVMVLPTITSLTVDSLKAVPSHFRKASMALGSTHWQTIYHVVLR 238

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + P ++  ++  M+  +   +A +M++  
Sbjct: 239 VATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 77/236 (32%), Gaps = 25/236 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA------------WQSIGYIVNHF 371
           +   P          +    L I    V+    IG                 I ++ +  
Sbjct: 37  KLTKPSKETHQEYWGKGLTYLAIVLIIVLVVSIIGFVGYHGLATFVSDHVNVIHFLTSTD 96

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLL 425
                        + +    ++ ++A+++  P  I I            ++ +Q   +LL
Sbjct: 97  WDPGEGKNHVGAAVMIVTSFLVTLLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELL 156

Query: 426 AAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPND 478
              P+ V+      ++V  +   +      +  + L +F      + +  +    A P+ 
Sbjct: 157 VGIPSVVYGFLGLTIIVPVIRKLFGGTGFGILAATLALFVMVLPTITSLTVDSLKAVPSH 216

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           F++ + +   T W+   +++L    P  +T  I     A+  ++  ++     + +
Sbjct: 217 FRKASMALGSTHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIGNAVLM 272


>gi|295100858|emb|CBK98403.1| ABC-type spermidine/putrescine transport system, permease component
           I [Faecalibacterium prausnitzii L2-6]
          Length = 271

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 103/257 (40%), Gaps = 22/257 (8%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +++    F  +    V+ +  ++ + + ++     + ++V ++          +R+ L  
Sbjct: 6   KKLACPYFVWMVLFTVVPLFIVVYYALTDSAGSFTLDNLVTVS----GYGSVFARSLLLA 61

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILD--IMQSIPILGFLTF-----T 119
           L + V+ L+  F      ++ R       L +V++P+    ++++   +G L+       
Sbjct: 62  LISTVVCLIIAFPVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSVNGPVNA 121

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +    L P  ++    A +  +  + V  M   +Y S+  I + + E ++    S  + 
Sbjct: 122 ALGVFGLGPYNMLNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSIVEAAQDLGASTTKT 181

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDL 238
            + + +P S+PG+   + M         V S M+  G  ++    IG  I    +     
Sbjct: 182 LFRVLIPMSIPGISTGITMVFVPAVSTFVISRMLGGGSNLL----IGDLIEMQFLGNSYN 237

Query: 239 LAILYAMLTMLGVIFLY 255
           L +  AM  +L VI L 
Sbjct: 238 LNVGSAMSLVLMVIVLL 254



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 81/245 (33%), Gaps = 22/245 (8%)

Query: 347 FWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCI---TMFRVVVLIIIASIIWI 402
            W  +   V +  + + ++      FT  +++ V   G +   ++   ++  ++  II  
Sbjct: 14  VWMVLFTVVPLFIVVYYALTDSAGSFTLDNLVTVSGYGSVFARSLLLALISTVVCLIIAF 73

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA-----FPANVFFPLVVS------CVSYYHLNP--- 448
           PVG ++         I     +L            +  L+         +  + L P   
Sbjct: 74  PVGYFLSRLRVNKQHIMLMLVMLPMWMNFLLRTYAWMGLLSVNGPVNAALGVFGLGPYNM 133

Query: 449 ---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  + L M++    Y++  +    +       E A     +  +    +++P   P 
Sbjct: 134 LNTSGAVVLGMVYNYVPYMILPLYTSMTKIDQSIVEAAQDLGASTTKTLFRVLIPMSIPG 193

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGSFPEVVLGVLIMCC 564
             TG       A +  ++S +   G   L    +   ++  S        + L ++++  
Sbjct: 194 ISTGITMVFVPAVSTFVISRMLGGGSNLLIGDLIEMQFLGNSYNLNVGSAMSLVLMVIVL 253

Query: 565 FVLAL 569
             ++ 
Sbjct: 254 LCMSF 258


>gi|289191693|ref|YP_003457634.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanocaldococcus sp. FS406-22]
 gi|288938143|gb|ADC68898.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanocaldococcus sp. FS406-22]
          Length = 282

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 111/268 (41%), Gaps = 17/268 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVD-IVPITLDVHSLPQYASRTTLRMLSAMV 77
           IF + + ++V+GII +LL            ++ I  +  +  +         +      +
Sbjct: 15  IFAIFSSIVVLGIIFLLLVNGLPIFNYVSPINFIFGMNWNPDTGDFGIFPMIIGSFCITI 74

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
           ++LLF        A       S ++  VL P+++I+ +IP + +    +   V +   + 
Sbjct: 75  LALLFAVPLGVGCAIYLAEIASEKVRNVLKPVVEILTAIPSVVYGFVGMVLLVPWIREIL 134

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                 +  AA   +    +  +T     ++ N+P+ +++ S S   + WQ   Y+ +P 
Sbjct: 135 NVNPGYSWFAASVILSIMILPTITSISEDAIRNVPQSIKKASFSLGATHWQTIKYVILPH 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAI 241
           S  G++  + ++M       +A  M+     +I      P+  + S+I L IKE  + + 
Sbjct: 195 SFRGILAGIFLAMGRAVGETMAVLMVAGNCPLIPKSIFDPVRPLTSHIILNIKEASVGSP 254

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +Y  +   G+I L+  ++    I    K
Sbjct: 255 VYYAMFACGIILLFIIVVLNICIRMIEK 282



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 16/201 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I +  +V G+ I      I +I       D         I       + I+A +  +
Sbjct: 24  VLGIIFLLLVNGLPIFNYVSPINFIFGMNWNPDTGDFGIFPMI--IGSFCITILALLFAV 81

Query: 403 PVGIWIGF------RPHISSKIQPFAQLLAAFPANVF----FPLVVSCV---SYYHLNPN 449
           P+G+             + + ++P  ++L A P+ V+      L+V  +      +   +
Sbjct: 82  PLGVGCAIYLAEIASEKVRNVLKPVVEILTAIPSVVYGFVGMVLLVPWIREILNVNPGYS 141

Query: 450 LWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + + +++       + ++        P   K+ + S   T W+  +Y+ILP  F   + 
Sbjct: 142 WFAASVILSIMILPTITSISEDAIRNVPQSIKKASFSLGATHWQTIKYVILPHSFRGILA 201

Query: 509 GAITACGGAWNASIVSEVASW 529
           G   A G A   ++   + + 
Sbjct: 202 GIFLAMGRAVGETMAVLMVAG 222


>gi|218548807|ref|YP_002382598.1| ABC transporter membrane protein [Escherichia fergusonii ATCC
           35469]
 gi|218356348|emb|CAQ88966.1| putative ABC transporter membrane protein, membrane component
           [Escherichia fergusonii ATCC 35469]
 gi|324113372|gb|EGC07347.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 216

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 83/213 (38%), Gaps = 10/213 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   L     +    +  A+ ++++       L  + + L   ++    ++ +IP +   
Sbjct: 10  NAGYLAALTLQHLWLVALAVGLAIIIGIPLGILIVRHKWLATPILGTATLLLTIPSVALF 69

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F     G      L AI A+F   +  +  + + +L ++P  L E  R   ++ 
Sbjct: 70  GLMIPLFSLFGQGI---GALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTF 126

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           WQ+  ++ +P ++P +   +  ++      +  + +I  G   + L          I   
Sbjct: 127 WQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIGGS 179

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           D+  ++   L +  +  + D LL R  +V + K
Sbjct: 180 DMRMLISGALLICLLAIVLDWLLHRLQVVLTPK 212



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           ++   +  Y+  L    ++ V + + +A II IP+GI I     +++ I   A LL   P
Sbjct: 5   NYLIDNAGYLAALTLQHLWLVALAVGLAIIIGIPLGILIVRHKWLATPILGTATLLLTIP 64

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   F L++   S +        ++  +   +   I+ N      + P   +E      +
Sbjct: 65  SVALFGLMIPLFSLFGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGM 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T W+  R++ +P   P    G  TA         ++ V   G + L              
Sbjct: 125 TFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLL-------LNGIG 177

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWH 575
                 ++ G L++C   + L+  L  
Sbjct: 178 GSDMRMLISGALLICLLAIVLDWLLHR 204


>gi|161613150|ref|YP_001587115.1| hypothetical protein SPAB_00858 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168242244|ref|ZP_02667176.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|194451839|ref|YP_002046215.1| inner membrane ABC transporter permease YehW [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|161362514|gb|ABX66282.1| hypothetical protein SPAB_00858 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194410143|gb|ACF70362.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|205338292|gb|EDZ25056.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 243

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGMAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  G  +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAG--MAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|332886073|gb|EGK06317.1| hypothetical protein HMPREF9456_00191 [Dysgonomonas mossii DSM
           22836]
          Length = 402

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 64/160 (40%), Gaps = 6/160 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L  + A++I+L      A   ++  + R   ++ P ++++  IP + +    L   V 
Sbjct: 182 TLLVSIVAILIALPLGLGVAIYISELANERTRKLMKPTIELLAGIPSVVYGFFGLVVLVP 241

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                +   V          +    +  +      ++ N PR + E S +   + WQ  +
Sbjct: 242 IVQKTFHLPVGETAFTGSLILAIMALPTIITVAEDAMRNTPRAMREASLALGATHWQTVY 301

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + +P+S+ G+   +++ +       +A  M+     +IP
Sbjct: 302 KVVIPYSISGISAAVVLGIGRAIGETMAVLMVTGNAAIIP 341



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 10/180 (5%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLL 425
           +   T   +  V+ L   T+   +V I+IA  + + V I+I           ++P  +LL
Sbjct: 164 MPTATPAPLFGVLPLILGTLLVSIVAILIALPLGLGVAIYISELANERTRKLMKPTIELL 223

Query: 426 AAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           A  P+ V+         P+V               SL++       I+          P 
Sbjct: 224 AGIPSVVYGFFGLVVLVPIVQKTFHLPVGETAFTGSLILAIMALPTIITVAEDAMRNTPR 283

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +E + +   T W+    +++P          +   G A   ++   + +     +  +
Sbjct: 284 AMREASLALGATHWQTVYKVVIPYSISGISAAVVLGIGRAIGETMAVLMVTGNAAIIPHS 343


>gi|206564219|ref|YP_002234982.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
 gi|198040259|emb|CAR56244.1| putative ABC transporter system permease [Burkholderia cenocepacia
           J2315]
          Length = 392

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V +P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGVPLGIACARIAAVRTVAMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRVQRLLRVDLVLALPVILSGVRI 326



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 13/148 (8%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + +   P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGVPLGIACARIAAVRTVAMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
            +T  +    + L    P  ++G     
Sbjct: 301 GMTRVQRLLRVDLVLALPVILSGVRIVL 328


>gi|302560415|ref|ZP_07312757.1| osmoprotectant ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
 gi|302478033|gb|EFL41126.1| osmoprotectant ABC transporter, permease [Streptomyces griseoflavus
           Tu4000]
          Length = 215

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +   MV++ L   +   +  +S   G +       + +IP L  +   +       P   
Sbjct: 25  VFQCMVVATLLGVLIGVVTYRSEWAGNLATTTTAALLTIPSLAMIGLLIPLVGLGVPP-- 82

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  + A+    +  +  +    L  +   L + ++   +S   +   + +P + P 
Sbjct: 83  ------TVIALTLYGLLPIVRNSIVGLRGVDPSLVDAAKGIGMSRSARLARVELPLAWPP 136

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  + +S +     + A      G      PG+G+ I   I        L  +L     
Sbjct: 137 ILTGIRVS-TQMLMGIAAIAAYASG------PGLGNLIFRGIASLGSKNALNQVLAGTLG 189

Query: 252 IFLYDQLL 259
           I +   L 
Sbjct: 190 IIILALLF 197



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+++ + +G+         +        L   P+     L++  V        
Sbjct: 25  VFQCMVVATLLGVLIGVVTYRSEWAGNLATTTTAALLTIPSLAMIGLLIPLVGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A    ++       + LP  +P  +TG
Sbjct: 85  IALTLYGLL----PIVRNSIVGLRGVDPSLVDAAKGIGMSRSARLARVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAY----IAESTEKGSFPEVVLGVLIMCCF 565
              +       + ++  AS         GLG      IA    K +  +V+ G L +   
Sbjct: 141 IRVSTQMLMGIAAIAAYASG-------PGLGNLIFRGIASLGSKNALNQVLAGTLGIIIL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|217078031|ref|YP_002335749.1| sugar abc transporter, permease protein [Thermosipho africanus
           TCF52B]
 gi|217037886|gb|ACJ76408.1| sugar abc transporter, permease protein [Thermosipho africanus
           TCF52B]
          Length = 426

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 77/193 (39%), Gaps = 7/193 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFTVVY 122
             R+    +  ++ISL    +     A+    G  L+ + +  ++  P +   +   ++ 
Sbjct: 224 LFRSIQVAILTVLISLTIGGMAGYAFARYNFKGKNLLKLSVLFVRMFPGISIAMPMVIIL 283

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +  K IG  L          +W +T S++  +    ++LEE +  F  + W  F+ 
Sbjct: 284 INMGFYDKPIGLSLVYSVGQIGMTIW-ITASIFMGIS---KELEEAAMIFGTTRWGAFFK 339

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PGL  + M +  G W     + ++   +   P+  +   +  A    +L A  
Sbjct: 340 VTLPLALPGLAASAMYAFIGSWSETAQAIVLTQFNPTFPVV-VYQTLVGAKGLINLTAAG 398

Query: 243 YAMLTMLGVIFLY 255
              L +  VIF  
Sbjct: 399 GVSLALPAVIFTL 411



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 15/204 (7%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-----RPHISSKIQPFAQLLAA 427
           Y +   V       +FR + + I+  +I + +G   G+          + ++     +  
Sbjct: 210 YVNFFRVTSDALPALFRSIQVAILTVLISLTIGGMAGYAFARYNFKGKNLLKLSVLFVRM 269

Query: 428 FPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           FP      P+V+  ++    +  + LSL+   G     ++   +       + +E A  F
Sbjct: 270 FPGISIAMPMVIILINMGFYDKPIGLSLVYSVGQIGMTIWITASIFMGISKELEEAAMIF 329

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWN----ASIVSEV-----ASWGHIHLRTT 537
             T W  +  + LP   P     A+ A  G+W+    A ++++             +   
Sbjct: 330 GTTRWGAFFKVTLPLALPGLAASAMYAFIGSWSETAQAIVLTQFNPTFPVVVYQTLVGAK 389

Query: 538 GLGAYIAESTEKGSFPEVVLGVLI 561
           GL    A      + P V+  ++I
Sbjct: 390 GLINLTAAGGVSLALPAVIFTLII 413


>gi|184155704|ref|YP_001844044.1| phosphate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227515703|ref|ZP_03945752.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|183227048|dbj|BAG27564.1| phosphate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227085951|gb|EEI21263.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|299783400|gb|ADJ41398.1| Phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum CECT 5716]
          Length = 299

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 19/211 (9%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFM 124
              M   + + L      A           V  P+++++  IP + +    LT  +    
Sbjct: 86  VTMMAGVVALPLALMVALAVTEILPATFRKVTQPVIELLVGIPSVVYGFVGLTVIIPVLR 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             + G   G  LAA   +F   V  M      +L  +P      SR    + WQ  +   
Sbjct: 146 QWFGGTGFGM-LAATVVLFLMIVPTMVSMTIDTLLAVPESYRMASRGLGATRWQTIYRTI 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--------------GIGSYIA 230
           +P +  G++  M+  M+  +   +A +M+V   +++P                GIG+ + 
Sbjct: 205 LPSATGGVLTAMIFGMARAFGEALAVQMVVGNASIMPTSLMSSAATLTSVLTTGIGNTVM 264

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                  L ++   +L M     L  +L+ R
Sbjct: 265 GTAANDALWSLALVLLVMSLFFNLAMRLVNR 295



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 29/208 (13%)

Query: 394 IIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            ++A ++ +P+ + +                QP  +LL   P+ V+         P++  
Sbjct: 87  TMMAGVVALPLALMVALAVTEILPATFRKVTQPVIELLVGIPSVVYGFVGLTVIIPVLRQ 146

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                     L  ++++       ++   I    A P  ++  +     T W+     IL
Sbjct: 147 WFGGTGFG-MLAATVVLFLMIVPTMVSMTIDTLLAVPESYRMASRGLGATRWQTIYRTIL 205

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAYIAE 545
           P      +T  I     A+  ++  ++                     + TTG+G  +  
Sbjct: 206 PSATGGVLTAMIFGMARAFGEALAVQMVVGNASIMPTSLMSSAATLTSVLTTGIGNTVMG 265

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +    +   + L +L+M  F     R +
Sbjct: 266 TAANDALWSLALVLLVMSLFFNLAMRLV 293


>gi|163760662|ref|ZP_02167743.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
 gi|162282277|gb|EDQ32567.1| binding-protein-dependent transport systems inner membrane
           component [Hoeflea phototrophica DFL-43]
          Length = 533

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +I  +   I A+    +  M   +Y  +  IP+     ++S   + W  FW +  P S+P
Sbjct: 396 MINNQFGTIVAMTHILLPFMILPLYSVMKTIPQTYVRAAKSLGATNWTAFWRVYFPQSVP 455

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G+    ++       + +  E++            G++I+  I      ++ + +   LG
Sbjct: 456 GIGAGSILVFILAIGYYITPELVGGTT--------GTFISNRIAYHISSSLNWGLAAALG 507

Query: 251 VIFLYDQLLF 260
            I L   LL 
Sbjct: 508 TILLAVVLLL 517



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 4/147 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  +V        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 382 LVWLGMVNDADRLVMINNQFGTIVAMTHILLPFMILPLYSVMKTIPQTYVRAAKSLGATN 441

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 442 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTTGTFISNRIAYHISSSLNWG 501

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPL 577
               +   +  +   V+ L  +++  +
Sbjct: 502 ----LAAALGTILLAVVLLLYWVYDRI 524


>gi|254249945|ref|ZP_04943265.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
 gi|124876446|gb|EAY66436.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia PC184]
          Length = 392

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V +P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRVQRLLRVDLVLALPVILSGVRI 326



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 14/200 (7%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + +   P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAE 545
            +T  +    + L    P  ++G           + + + +   G       G+G   A+
Sbjct: 301 GMTRVQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAAD 360

Query: 546 STEKGSFPEVVLGVLIMCCF 565
               G+ P + L +     F
Sbjct: 361 LVLLGAIPTIALALASAVVF 380


>gi|313904824|ref|ZP_07838197.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313470427|gb|EFR65756.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 221

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 17/211 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V+    I  +  +P+G+ +             + S I     +L + P  +   LV
Sbjct: 18  TLYMVLASTFIGYVFGLPLGVLLVATKPDGIHPNRILYSVIGLIINILRSIPFVILLILV 77

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    V          +   + F    YI   V +  +       E A +   +  +  R
Sbjct: 78  LPVTRVIVGTSLGAKAVIPALTFAAAPYIARMVESELAEVNKGVIEAAKAMGASDGQIIR 137

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  + GA          S +S     G +       G Y      +   P +
Sbjct: 138 KVLLPEAKPSLILGAALVLTTVVGYSCMSGFVGGGGLGDIAVRYGYY------RYDIPVM 191

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           ++ V+ +   V A+ +   + LY    + +R
Sbjct: 192 LVAVVFLILLVQAI-QLAGNKLYAKTDKRIR 221



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQ 108
               L Q    T   +L++  I  +F      L           +R L  V+  I++I++
Sbjct: 7   TWKMLGQGIWETLYMVLASTFIGYVFGLPLGVLLVATKPDGIHPNRILYSVIGLIINILR 66

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           SIP    L   V+    +  G  +GA+ A I A+  +    +   +   L  + + + E 
Sbjct: 67  SIP-FVILLILVLPVTRVIVGTSLGAK-AVIPALTFAAAPYIARMVESELAEVNKGVIEA 124

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +++   S  Q    + +P + P L+    +
Sbjct: 125 AKAMGASDGQIIRKVLLPEAKPSLILGAAL 154


>gi|160915937|ref|ZP_02078145.1| hypothetical protein EUBDOL_01961 [Eubacterium dolichum DSM 3991]
 gi|158432413|gb|EDP10702.1| hypothetical protein EUBDOL_01961 [Eubacterium dolichum DSM 3991]
          Length = 246

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 86/222 (38%), Gaps = 14/222 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +    ++  +I   ++       P D+++ +   L   S  Q  + T +R    +  +  
Sbjct: 10  VFVLFILWQLIASQMNNDFLFPYPYDVINRMLEQLVDPSFYQNVALTIIRSSLGLCFAFG 69

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             F+ A  +  S     +  PIL + +S+P + ++   +V+F         G+E ++   
Sbjct: 70  LAFLCAYASYHSTVFYDLFYPILLLTRSVPNVAYIIIVLVWF---------GSEKSSAIV 120

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +  S+Y  L  +  +L +V + +      + W + +P     ++ +    +S
Sbjct: 121 SFLIIFPTIFASLYHGLRYMDENLSKVLQLYPEKTSYRLWKVYIPLLKTEMISSFSNGLS 180

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             +   V +E++          GIG  + L     D++ I  
Sbjct: 181 LTFKVGVMAEILG-----QVQFGIGRQLNLCRITSDMVGIFA 217



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 49/176 (27%), Gaps = 10/176 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R  + +  A  +                   P   L  + P   +  +V+     
Sbjct: 54  ALTIIRSSLGLCFAFGLAFLCAYASYHSTVFYDLFYPILLLTRSVPNVAYIIIVLVWFGS 113

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +S L+IF T +  L+    G      +  +V   +          + +P + 
Sbjct: 114 EKSS--AIVSFLIIFPTIFASLY---HGLRYMDENLSKVLQLYPEKTSYRLWKVYIPLLK 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
              ++         +   +++E+           G+G  +           +    
Sbjct: 169 TEMISSFSNGLSLTFKVGVMAEILG-----QVQFGIGRQLNLCRITSDMVGIFAWT 219


>gi|170737499|ref|YP_001778759.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
 gi|169819687|gb|ACA94269.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia MC0-3]
          Length = 392

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V +P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRVQRLLRVDLVLALPVILSGVRI 326



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 14/200 (7%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + +   P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAE 545
            +T  +    + L    P  ++G           + + + +   G       G+G   A+
Sbjct: 301 GMTRVQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAAD 360

Query: 546 STEKGSFPEVVLGVLIMCCF 565
               G+ P + L +     F
Sbjct: 361 LVLLGAIPTIALALASAVVF 380


>gi|210621749|ref|ZP_03292798.1| hypothetical protein CLOHIR_00743 [Clostridium hiranonis DSM 13275]
 gi|210154631|gb|EEA85637.1| hypothetical protein CLOHIR_00743 [Clostridium hiranonis DSM 13275]
          Length = 277

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T   ++ A+++S     + A      AK  RL   +    + +  IP + +  F  ++
Sbjct: 64  LATVYTVVIAILVSAPVGILAAIYLQEYAKQGRLVSAIRFCTESLAGIPSIIYGLFGGIF 123

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+            +   AI    V  +  +  ++L  +P+   E S +   +  Q  + 
Sbjct: 124 FVTFMKMGYSLLSGSLTVAIIILPV--IIRTTEEALKTVPQSYREASFALGATKLQTLYK 181

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           + VP +MPG++  +++S+ 
Sbjct: 182 VIVPSAMPGIISGVILSIG 200



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 63/177 (35%), Gaps = 5/177 (2%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + + +  V      G    +  +I + +       V  +   T++ VV+ I++++ + I 
Sbjct: 24  VAMLFVIVGYIFYKGFGNINFNFIFSDYQASGDGGVYPMILATVYTVVIAILVSAPVGIL 83

Query: 404 VGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFG 459
             I++         +       + LA  P+ ++          +  +  +L    L +  
Sbjct: 84  AAIYLQEYAKQGRLVSAIRFCTESLAGIPSIIYGLFGGIFFVTFMKMGYSLLSGSLTVAI 143

Query: 460 TQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
               ++           P  ++E + +   T  +    +I+P   P  ++G I + G
Sbjct: 144 IILPVIIRTTEEALKTVPQSYREASFALGATKLQTLYKVIVPSAMPGIISGVILSIG 200


>gi|16801703|ref|NP_471971.1| hypothetical protein lin2641 [Listeria innocua Clip11262]
 gi|254994274|ref|ZP_05276464.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes FSL J2-064]
 gi|255520615|ref|ZP_05387852.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes FSL J1-175]
 gi|16415178|emb|CAC97868.1| lin2641 [Listeria innocua Clip11262]
 gi|328465106|gb|EGF36374.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           1816]
 gi|328471112|gb|EGF42016.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           220]
          Length = 307

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 83  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 143 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 202 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 261

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 262 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 303



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 80  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 139

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 140 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 199

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 200 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 259

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 260 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 303


>gi|302544364|ref|ZP_07296706.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302461982|gb|EFL25075.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 245

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 2/158 (1%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G+  ++  ++     +     V       +F   V + I+  + +PV + +G      +
Sbjct: 1   MGVIGEAWNWLATGSHWSGGDGVWHRLGQHLFLTFVCLAISCAVALPVAVLLGHIGKGGA 60

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                +    A P       V+  +S    +      + ++      +L N   G S   
Sbjct: 61  IAVNISNAGRAVPTFAVL--VLLLLSPLGSHGQWPTIIALVLFAIPPLLTNAYVGVSEAD 118

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +  E A    +TG +  R + LP  FP  +TG  TA 
Sbjct: 119 REVVEAARGMGMTGGQLIRRVELPLAFPLIMTGVRTAA 156



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +        + IS       A L     + G + V I +  +++P         V  +
Sbjct: 27  LGQHLFLTFVCLAISCAVALPVAVLLGHIGKGGAIAVNISNAGRAVPTFA------VLVL 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L        +   I A+    +  +  + Y  +    R++ E +R   ++G Q    + 
Sbjct: 81  LLLSPLGSHGQWPTIIALVLFAIPPLLTNAYVGVSEADREVVEAARGMGMTGGQLIRRVE 140

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  +  +
Sbjct: 141 LPLAFPLIMTGVRTA 155


>gi|57167644|ref|ZP_00366784.1| probable phosphate transport system permease protein Cj0615
           [Campylobacter coli RM2228]
 gi|57020766|gb|EAL57430.1| probable phosphate transport system permease protein Cj0615
           [Campylobacter coli RM2228]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|296141815|ref|YP_003649058.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296029949|gb|ADG80719.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 259

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 89/245 (36%), Gaps = 24/245 (9%)

Query: 18  NIFDLLA--FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
             FDL+    ++V+G +  L+    +T       +   + L    L +         + +
Sbjct: 17  PPFDLILEPLLVVVGFVGYLIWHATQTFS-----ETEAVQLQWSQLGRSVGEHIWLTVVS 71

Query: 76  MVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            V+ ++       L  + R  R+  ++V + +I Q+ P+LG +    ++           
Sbjct: 72  AVLVVIIAIPLGILVTRKRFARISPIIVGLANIGQAAPVLGMVVLFAMWLGTG------- 124

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A+ A+    V  +  +    L  +   + E +R    SG+Q    + +P S+P ++
Sbjct: 125 -RWTAVAALVVYAVLPILQNTIVGLRQVDDRVIEAARGQGFSGFQTLIKVELPLSVPVIL 183

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  ++      V+      +G   I   G+G  I   +       +    L +  +  
Sbjct: 184 HGVRTAL------VILVGTATLGTF-IGAGGLGVLITTGVTLYLPPLLFSGALLVALLAL 236

Query: 254 LYDQL 258
             D +
Sbjct: 237 AIDWV 241



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 78/248 (31%), Gaps = 10/248 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIAS 398
             + L +    VV G    + W +          Q     +       ++  VV  ++  
Sbjct: 17  PPFDLILEPLLVVVGFVGYLIWHATQTFSETEAVQLQWSQLGRSVGEHIWLTVVSAVLVV 76

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           II IP+GI +  +      I P    LA          +V   + +           ++ 
Sbjct: 77  IIAIPLGILVTRKRFAR--ISPIIVGLANIGQAAPVLGMVVLFAMWLGTGRWTAVAALVV 134

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                IL N I G     +   E A     +G++    + LP   P  + G  TA     
Sbjct: 135 YAVLPILQNTIVGLRQVDDRVIEAARGQGFSGFQTLIKVELPLSVPVILHGVRTALVILV 194

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             + +      G       GLG  I         P +  G L++    LA++       Y
Sbjct: 195 GTATLGTFIGAG-------GLGVLITTGVTLYLPPLLFSGALLVALLALAIDWVARLAEY 247

Query: 579 LYGTRCLR 586
           L   R LR
Sbjct: 248 LLSPRGLR 255


>gi|227515097|ref|ZP_03945146.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           fermentum ATCC 14931]
 gi|227086545|gb|EEI21857.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           fermentum ATCC 14931]
          Length = 209

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 64/161 (39%), Gaps = 16/161 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           +  ++ S+P   F       F  L P   +G   A +  +  S+   +  +    L  I 
Sbjct: 54  VFSLLYSVPSFAF-------FALLLPLTGLGDTTATVVLVVYSEYV-LLRTFITGLRAID 105

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L EV+    ++  Q F+ + +P + P +   + ++++        +  I  G      
Sbjct: 106 PSLVEVAYGMGMTSRQVFFKVQLPLATPAIFSGLQVALASTMSIATIAATINAG------ 159

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
            G+G+ +   ++ Q L  +L+ ++ M   + L    + R +
Sbjct: 160 -GLGNLLFEGLQTQQLPPLLWGII-MTVALTLVSIAILRIL 198



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 65/175 (37%), Gaps = 12/175 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              + + +     LL + P+  FF L++              +++++  +++ +L   I 
Sbjct: 44  HDRLLTGLTYVFSLLYSVPSFAFFALLLPLTGLGDTT----ATVVLVVYSEYVLLRTFIT 99

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G  A      EVA    +T  + +  + LP   P   +G   A     + + ++   + G
Sbjct: 100 GLRAIDPSLVEVAYGMGMTSRQVFFKVQLPLATPAIFSGLQVALASTMSIATIAATINAG 159

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                  GLG  + E  +    P ++ G++ M   +  ++  +   L  +     
Sbjct: 160 -------GLGNLLFEGLQTQQLPPLLWGII-MTVALTLVSIAILRILQHFLRPRF 206


>gi|157369691|ref|YP_001477680.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157321455|gb|ABV40552.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 260

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
             A +L +      LHG+     P     +      +  +  +     +  L A+VI + 
Sbjct: 17  TFALLLALVFGMNHLHGLFAAWFPELERPVYQQDSFISLVWAHLLLVAVSSLVAVVIGVS 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   A K      ++  ++ + Q+ P +  L   V             +E  AI A
Sbjct: 77  AGVAVTRRAGK--EFRSLVETLVAVGQTFPPVAVLAIAVPVMG--------FSEQPAIIA 126

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +    +  +       + ++P    E+++   +S  Q  W + +P + P +V  +  S+ 
Sbjct: 127 LVLYGLLPILQGTLAGIESVPSATREIAQGVGMSPRQILWRVELPLAAPVIVAGIRTSVI 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                  A+    VG        +GS I + +   +   ++   + +  +  + D L  R
Sbjct: 187 I--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAVVVALLAIITDMLFER 239



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 78/244 (31%), Gaps = 13/244 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
             L   +            +V G+       +  +             I L    +  V 
Sbjct: 5   RALRWLRDPLPWTFALLLALVFGMNHLHGLFAAWFPELERPVYQQDSFISLVWAHLLLVA 64

Query: 392 VLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V  ++A +I +  G+ +  R      S ++    +   FP      + V  + +      
Sbjct: 65  VSSLVAVVIGVSAGVAVTRRAGKEFRSLVETLVAVGQTFPPVAVLAIAVPVMGFSEQPAI 124

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L L  +      IL   +AG  + P+  +E+A    ++  +    + LP   P  V G
Sbjct: 125 IALVLYGLL----PILQGTLAGIESVPSATREIAQGVGMSPRQILWRVELPLAAPVIVAG 180

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++         + T  LG+ I       +   V+ G +++    +  
Sbjct: 181 IRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAVVVALLAIIT 233

Query: 570 NRFL 573
           +   
Sbjct: 234 DMLF 237


>gi|88596972|ref|ZP_01100208.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190661|gb|EAQ94634.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|307261397|ref|ZP_07543072.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869128|gb|EFN00930.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 225

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       +A          + RL  VL  I++I +S+P    L
Sbjct: 21  TLETLYMGFAATLLAVVVGLPIGFMAFLTGKGEILENPRLHQVLDVIINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVRKFYLPESLPILINGITLTL 162



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 14/163 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    V      T++      ++A ++ +P+G          I   P + 
Sbjct: 2   WDSFMQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFMAFLTGKGEILENPRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVIINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
               P    E A S   T W+  R   LP   P  + G     
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVRKFYLPESLPILINGITLTL 162


>gi|218562266|ref|YP_002344045.1| putative phosphate transport system permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|112359972|emb|CAL34761.1| putative phosphate transport system permease protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315927351|gb|EFV06695.1| phosphate ABC transporter, permease protein PstA [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|85711166|ref|ZP_01042226.1| ABC-type phosphate transport system, permease component [Idiomarina
           baltica OS145]
 gi|85695079|gb|EAQ33017.1| ABC-type phosphate transport system, permease component [Idiomarina
           baltica OS145]
          Length = 553

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 20/155 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           T   +L   VI   F  V A      A K+    ++ + +++ +  +P + +  F + +F
Sbjct: 308 TVFMVLLMSVIVTPFGVVAAVYLHEYAGKNPVTKLIRIAVIN-LAGVPSIVYGVFGLGFF 366

Query: 124 MNLYPGKVIGAE---------------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + +  G +                   L +   +    +  +  S  + L  IP  L E 
Sbjct: 367 VYMVGGSIDQVFYPEALPNPTFGTPGVLWSAITLAILTLPVVIVSTEEGLARIPSSLREG 426

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           S +   + W+  W + VP + P ++  ++++++  
Sbjct: 427 SLALGATKWETIWRIIVPMASPAIMTGLILAVARA 461



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 26/157 (16%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVFFPLVVS 439
           +F  V ++++ S+I  P G+      H  +   P  +L       LA  P+ V+    + 
Sbjct: 305 IFGTVFMVLLMSVIVTPFGVVAAVYLHEYAGKNPVTKLIRIAVINLAGVPSIVYGVFGLG 364

Query: 440 CVSY-------------------YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              Y                   +     LW ++ +   T   ++ +   G +  P+  +
Sbjct: 365 FFVYMVGGSIDQVFYPEALPNPTFGTPGVLWSAITLAILTLPVVIVSTEEGLARIPSSLR 424

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E + +   T W     II+P   P  +TG I A   A
Sbjct: 425 EGSLALGATKWETIWRIIVPMASPAIMTGLILAVARA 461


>gi|323465888|gb|ADX69575.1| Phosphate ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 295

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 74/191 (38%), Gaps = 13/191 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--------SRTTLRML 73
                +++GI+ ++L GI    +   +  +    L   +    A          +   ++
Sbjct: 11  TAIIYILVGIVVLILAGILGNILITGVPHLSWHFLSSEASSYQAGGGVRDQLFNSIYLLI 70

Query: 74  SAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              +ISL      A   A   K      ++   + I+ S+P +    F  + F+  +   
Sbjct: 71  LTTIISLPIALGAAIYLAEYAKDNWGTNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGLG 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 A     F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++P
Sbjct: 131 FSIISGALALTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALP 188

Query: 191 GLVWNMMMSMS 201
           G++  +++S  
Sbjct: 189 GILTGIILSAG 199



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   V H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGNILITGVPHLSWHFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVV 438
               +++ +++  II+  I +   I++         ++ I+   Q+L++ P+     +VV
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWGTNLIRTTIQILSSLPS-----IVV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGW 491
               Y        L   +I G      FN       +       P D +E   +  ++ W
Sbjct: 116 GLFGYLLFVVQFGLGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
           +  R I+LP   P  +TG I + G  + 
Sbjct: 176 KTIRGIVLPAALPGILTGIILSAGRIFG 203


>gi|320095310|ref|ZP_08027000.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces sp. oral
           taxon 178 str. F0338]
 gi|319977749|gb|EFW09402.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinomyces sp. oral
           taxon 178 str. F0338]
          Length = 255

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 16/183 (8%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +    ++     +  + +++       T    + R G  LV      +++P LG LT T
Sbjct: 38  GIVWRTAQHLGITVLVVALAMALAVPVGTWIGHTGR-GRWLVSATGAARAVPTLGVLTLT 96

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +               A   A+    +  M    Y  + +  R   + +R+  L+ WQ 
Sbjct: 97  GLALGIGL--------AAPAVALLVLALPPMLAGTYSGIASTDRTTVDAARAIGLTEWQV 148

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + VP +M  ++  +     G    V+A+  +          G+G ++   +K +D  
Sbjct: 149 VTQVEVPHAMAIIMAGVR----GAVLQVIATATLAAYTADY---GLGRFLYAGLKTRDYA 201

Query: 240 AIL 242
            ++
Sbjct: 202 QMI 204



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 70/202 (34%), Gaps = 12/202 (5%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +  +++ ++ +   +     ++W     +   V+++ +A  + +PVG WIG       
Sbjct: 17  MSVLIEALQWLADPGHWGGETGIVWRTAQHLGITVLVVALAMALAVPVGTWIG-HTGRGR 75

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
            +        A P      L    +      P + L +L        +L    +G ++  
Sbjct: 76  WLVSATGAARAVPTLGVLTLTGLALGIGLAAPAVALLVL----ALPPMLAGTYSGIASTD 131

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               + A +  +T W+    + +P      + G          A +     +    +   
Sbjct: 132 RTTVDAARAIGLTEWQVVTQVEVPHAMAIIMAGVR-------GAVLQVIATATLAAYTAD 184

Query: 537 TGLGAYIAESTEKGSFPEVVLG 558
            GLG ++    +   + +++ G
Sbjct: 185 YGLGRFLYAGLKTRDYAQMIGG 206


>gi|205355465|ref|ZP_03222236.1| putative phosphate transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346699|gb|EDZ33331.1| putative phosphate transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|153952260|ref|YP_001398147.1| phosphate ABC transporter permease [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939706|gb|ABS44447.1| putative phosphate ABC transporter, permease protein PstA
           [Campylobacter jejuni subsp. doylei 269.97]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|107025582|ref|YP_623093.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116693235|ref|YP_838768.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
 gi|105894956|gb|ABF78120.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia AU 1054]
 gi|116651235|gb|ABK11875.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia cenocepacia HI2424]
          Length = 392

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V +P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRMQRLLRVDLVLALPVILSGVRI 326



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 14/200 (7%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + +   P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGVPLGIACARIATVRTVAMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAE 545
            +T  +    + L    P  ++G           + + + +   G       G+G   A+
Sbjct: 301 GMTRMQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAAD 360

Query: 546 STEKGSFPEVVLGVLIMCCF 565
               G+ P + L +     F
Sbjct: 361 LVLLGAIPTIALALASAVVF 380


>gi|150024468|ref|YP_001295294.1| ABC-type phosphate-transport system, permease component PstA
           [Flavobacterium psychrophilum JIP02/86]
 gi|149771009|emb|CAL42476.1| ABC-type phosphate-transport system, permease component PstA
           [Flavobacterium psychrophilum JIP02/86]
          Length = 315

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 77/198 (38%), Gaps = 16/198 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   ++  II I+++   +      I       +    +      T + ++   + ++ 
Sbjct: 36  ILIIAVLFLIIGIIVYNGSDMFSWEFISSFPTDGMTKGGILPAIIGTFILVIVMSLAAVP 95

Query: 82  FTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE-- 135
           F  + A      AA++ R    +   +  +  +P + F  F + +F+      +      
Sbjct: 96  FGTITALYLTEYAAENSRFAAAVRFSVRTLAVVPSIIFGLFGLGFFIQFIGAGIDNTFND 155

Query: 136 ----------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L A   +    +  +  S+ ++L  +PR+L E S +   + WQ    + +
Sbjct: 156 GQLHWGQPNILWASLTMALLTLPVIIVSVEEALKTVPRELREASLALGATKWQTIRKVVL 215

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P S+ G++   ++++S G
Sbjct: 216 PESISGIMTGTILAVSRG 233



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 25/199 (12%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            + +L I    ++ G+ +        +        D +    +    +    +L+I+ S+
Sbjct: 33  AAVILIIAVLFLIIGIIVYNGSDMFSWEFISSFPTDGMTKGGI-LPAIIGTFILVIVMSL 91

Query: 400 IWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF----FPLVVSCVSYY--- 444
             +P G                 ++ ++   + LA  P+ +F        +  +      
Sbjct: 92  AAVPFGTITALYLTEYAAENSRFAAAVRFSVRTLAVVPSIIFGLFGLGFFIQFIGAGIDN 151

Query: 445 ---------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                         LW SL M   T   I+ +V       P + +E + +   T W+  R
Sbjct: 152 TFNDGQLHWGQPNILWASLTMALLTLPVIIVSVEEALKTVPRELREASLALGATKWQTIR 211

Query: 496 YIILPGIFPYYVTGAITAC 514
            ++LP      +TG I A 
Sbjct: 212 KVVLPESISGIMTGTILAV 230


>gi|81428234|ref|YP_395234.1| putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78609876|emb|CAI54923.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           membrane-spanning subunit [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 219

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 74/194 (38%), Gaps = 15/194 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L  +  ++++ +       L A  +++  V++ I +++Q++P L  L+  ++     
Sbjct: 27  RHFLISIYGVLLAAIIGIPIGILIAHRKKMSDVVIGIANVIQTVPSLAMLSIIMLGLGLG 86

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                       I  +F   +  +  + Y  + N+  ++ +      ++ WQ    + +P
Sbjct: 87  --------TNTVIMTVFLYSLLPIIKNTYTGMINVSPNILDSGLGVGMTKWQLLTMVELP 138

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+  ++  +          +V +  I    + +   G+G  I       D  A++ A  
Sbjct: 139 LSLAVIMAGIR-------NALVVAIGITAIGSFVGAGGLGDIIIRGTNATDGGALILAGA 191

Query: 247 TMLGVIFLYDQLLF 260
               ++ +   L+ 
Sbjct: 192 LPTALMAIIADLVL 205



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 51/171 (29%), Gaps = 15/171 (8%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
           R  +S  +   A ++   P+     +++  +          + + +   +   I+ N   
Sbjct: 53  RKKMSDVVIGIANVIQTVPSLAMLSIIMLGLGLGTNT----VIMTVFLYSLLPIIKNTYT 108

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G      +  +      +T W+    + LP      + G   A   A   + +      G
Sbjct: 109 GMINVSPNILDSGLGVGMTKWQLLTMVELPLSLAVIMAGIRNALVVAIGITAIGSFVGAG 168

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLG----VLIMCCFVLALNRFLWHPL 577
                  GLG  I   T       ++L       +M      +  F+   L
Sbjct: 169 -------GLGDIIIRGTNATDGGALILAGALPTALMAIIADLVLGFIQRRL 212


>gi|229506755|ref|ZP_04396264.1| phosphate transport system permease protein PstC [Vibrio cholerae
           BX 330286]
 gi|229357106|gb|EEO22024.1| phosphate transport system permease protein PstC [Vibrio cholerae
           BX 330286]
          Length = 306

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 28  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALYGVATM 87

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 88  IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  M      S+  +PR  +E S +   S   
Sbjct: 148 IVPLIQDVFDVPAGNTILAGIIVLGVMILPTMITVSETSIRAVPRAYKEGSLALGASSIY 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 208 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTMITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|95929020|ref|ZP_01311765.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
 gi|95134921|gb|EAT16575.1| binding-protein-dependent transport systems inner membrane
           component [Desulfuromonas acetoxidans DSM 684]
          Length = 740

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 80/282 (28%), Gaps = 20/282 (7%)

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           +P  VW +    +           +    + T    F         + L         + 
Sbjct: 413 KPEWVWQSSSASDDFEAKMSLTPLIYGTLKGT----FYAMIFAVPLALLGAVYTSQFGSK 468

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC-----GVAIGIAWQSIGYIVNHFTYQD 375
            +     P   +       +   L   WF  +      G  + +    + +++    +Q 
Sbjct: 469 RLRELIKPSVEIMAAVPSVIIGFLAALWFAPLLETHFPGFVLSLLIVPLVFLLLLILWQP 528

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
           +    W   +      +++    ++ + + + +G  P     +         F  N    
Sbjct: 529 MRDRPWAKYVESGHEFIVMAPLLVLAVAIALQLG--PWFEQLL---------FDGNFKLW 577

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L       Y    ++ +S  + F     I        S  P   K  + +   + W+   
Sbjct: 578 LFSEVGMRYDSRNSIVISFALGFAVIPIIFTITEDALSNVPQSLKAASLALGASRWQTVW 637

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            ++LP   P      +   G A   +++  +A+     +  +
Sbjct: 638 RVVLPSASPGIFAAVMIGLGRAVGETMIVLMATGNTPIMDLS 679



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +   FA+  + +  +      +L N+P+ L+  S +   S WQ  W + +P + PG+   
Sbjct: 592 IVISFALGFAVIPIIFTITEDALSNVPQSLKAASLALGASRWQTVWRVVLPSASPGIFAA 651

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLP---G---IGSYIALAIKEQDLLAILYAMLTML 249
           +M+ +       +   M      ++ L    G   + + IA+ I E      LY +L + 
Sbjct: 652 VMIGLGRAVGETMIVLMATGNTPIMDLSIFNGMRPLSANIAVEIPEAPHGDTLYRVLFLS 711

Query: 250 GVIFLYDQLLFR 261
            V+      +  
Sbjct: 712 AVLLFILTFILN 723


>gi|222081916|ref|YP_002541281.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726595|gb|ACM29684.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 237

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 78/213 (36%), Gaps = 10/213 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I + +N   +Q    +  L    +    + + IA++I +P G+++G     +  I   A 
Sbjct: 2   IEWFLNPAQWQGSEGIPNLLVQHLQYSFISLFIAALIGLPAGLYVGHTGKGTFLIAGLAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVIAGASAFPNDFK 480
              A P+     L+V  V  Y      +L     +++      I+    +G ++      
Sbjct: 62  ATRALPSLGLIVLLVILVGPYFKTDLAYLVPSIAVLVLIAVPPIMMGAYSGITSVDPAAV 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A             + LP   P   +G  +A     + + ++   S G       GLG
Sbjct: 122 DAARGMGYRPLALLLTVELPCALPLIFSGFRSAALQVISTATIAAYVSLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             I +   +  + ++  G +++    L ++ F 
Sbjct: 175 RLIIDGRAQNDYMQMAAGAVLVGVLALIVDLFF 207



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 64/200 (32%), Gaps = 8/200 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +P    +       ++ I+ L           + +   ++  + +  +++P LG +   
Sbjct: 16  GIPNLLVQHLQYSFISLFIAALIGLPAGLYVGHTGKGTFLIAGLANATRALPSLGLIVLL 75

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+     +    +   + +I  +    V  +    Y  + ++     + +R         
Sbjct: 76  VILVGPYF-KTDLAYLVPSIAVLVLIAVPPIMMGAYSGITSVDPAAVDAARGMGYRPLAL 134

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P ++P +        S     +  + +       + L G+G  I     + D +
Sbjct: 135 LLTVELPCALPLIFSGFR---SAALQVISTATIAA----YVSLGGLGRLIIDGRAQNDYM 187

Query: 240 AILYAMLTMLGVIFLYDQLL 259
            +    + +  +  + D   
Sbjct: 188 QMAAGAVLVGVLALIVDLFF 207


>gi|161506939|ref|YP_001576893.1| phosphate ABC transporter permease [Lactobacillus helveticus DPC
           4571]
 gi|260102423|ref|ZP_05752660.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|160347928|gb|ABX26602.1| Phosphate ABC transporter, permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260083743|gb|EEW67863.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|328462862|gb|EGF34711.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           helveticus MTCC 5463]
          Length = 331

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 63/154 (40%), Gaps = 11/154 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  +++ L    +A   A       S++    L  + +++  IP + +    LT  +  
Sbjct: 116 FAVTLLAALVATPFAVAIALYMTEYSSKKGASFLQSVTELLVGIPSVVYGFLGLTIIIPV 175

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              L+ G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  + 
Sbjct: 176 IRTLFGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGATHWQTIYR 234

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  + P ++  ++  M+  +   +A +M++  
Sbjct: 235 VVLRVATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 61/165 (36%), Gaps = 13/165 (7%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--- 433
             + +     + ++A+++  P  + I            +S +Q   +LL   P+ V+   
Sbjct: 108 AAVMIVTSFAVTLLAALVATPFAVAIALYMTEYSSKKGASFLQSVTELLVGIPSVVYGFL 167

Query: 434 ---FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHIT 489
                + V    +      +  + L++F      + +  +    A P+ F++ + +   T
Sbjct: 168 GLTIIIPVIRTLFGGTGFGILAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGAT 227

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            W+    ++L    P  +T  I     A+  ++  ++     + +
Sbjct: 228 HWQTIYRVVLRVATPRILTAVIFGMARAFGEALAVQMVIGNAVLM 272


>gi|161506940|ref|YP_001576894.1| phosphate ABC transporter permease [Lactobacillus helveticus DPC
           4571]
 gi|260102424|ref|ZP_05752661.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|160347929|gb|ABX26603.1| Phosphate ABC transporter, permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260083744|gb|EEW67864.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|328462863|gb|EGF34712.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           helveticus MTCC 5463]
          Length = 295

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 74/191 (38%), Gaps = 13/191 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--------SRTTLRML 73
                +++GI+ ++L GI    +   +  +    L   +    A          +   ++
Sbjct: 11  TAIIYILVGIVVLILAGILGNILITGVPHLSWHFLSSEASSYQAGGGVRDQLFNSIYLLI 70

Query: 74  SAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              +ISL      A   A   K      ++   + I+ S+P +    F  + F+  +   
Sbjct: 71  LTTIISLPIALGAAIYLAEYAKDNWGTNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGLG 130

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 A     F   +  +T ++ +++  +P+D  E   +  LS W+    + +P ++P
Sbjct: 131 FSIISGALALTFFNLPI--LTSNIEEAIKGVPQDQREAGLALGLSNWKTIRGIVLPAALP 188

Query: 191 GLVWNMMMSMS 201
           G++  +++S  
Sbjct: 189 GILTGIILSAG 199



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +      +V  +  GI    +   V H ++          Q    V  
Sbjct: 1   MDAKKKDKLATAIIYILVGIVVLILAGILGNILITGVPHLSWHFLSSEASSYQAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVV 438
               +++ +++  II+  I +   I++         ++ I+   Q+L++ P+     +VV
Sbjct: 61  QLFNSIYLLILTTIISLPIALGAAIYLAEYAKDNWGTNLIRTTIQILSSLPS-----IVV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGW 491
               Y        L   +I G      FN       +       P D +E   +  ++ W
Sbjct: 116 GLFGYLLFVVQFGLGFSIISGALALTFFNLPILTSNIEEAIKGVPQDQREAGLALGLSNW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
           +  R I+LP   P  +TG I + G  + 
Sbjct: 176 KTIRGIVLPAALPGILTGIILSAGRIFG 203


>gi|239827734|ref|YP_002950358.1| phosphate ABC transporter inner membrane subunit PstC [Geobacillus
           sp. WCH70]
 gi|239808027|gb|ACS25092.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           sp. WCH70]
          Length = 296

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 15/209 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  + A+++S       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSIGAVLLSTPIAIALAIFMHFISPKFGSSVLKPVLELLVGIPSVVYGWLGVTILVP 139

Query: 126 LYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L     G V  + LA I  +    +  +T     +L ++P    E S     + WQ    
Sbjct: 140 LLREWFGGVGFSLLAGIIVLSVMILPTITSITSDALNSVPFSYLEASYGLGSTRWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY-IALA 232
           + VP +  G++  +++ ++  +   +A +M++                L GI +  +A  
Sbjct: 200 VIVPAAKTGILTGIVLGLARAFGEALAVQMVIGNTVKLPSGLYSPTATLTGILTMDMANT 259

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           I        L+ +  +L +I  +  +L R
Sbjct: 260 INGTAWNNALWTLAMILLLISFFFIVLIR 288



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 78/220 (35%), Gaps = 24/220 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           +   Y  V++++    +++  V++   IA  + I +          SS ++P  +LL   
Sbjct: 67  SQPKYGAVIFIVGSTLVSIGAVLLSTPIAIALAIFMHFI--SPKFGSSVLKPVLELLVGI 124

Query: 429 PANVF--------FPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPND 478
           P+ V+         PL+         +    + +L  MI  T   I        ++ P  
Sbjct: 125 PSVVYGWLGVTILVPLLREWFGGVGFSLLAGIIVLSVMILPTITSI---TSDALNSVPFS 181

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI------ 532
           + E +     T W+    +I+P      +TG +     A+  ++  ++     +      
Sbjct: 182 YLEASYGLGSTRWQAISRVIVPAAKTGILTGIVLGLARAFGEALAVQMVIGNTVKLPSGL 241

Query: 533 ---HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                  TG+      +T  G+     L  L M   +++ 
Sbjct: 242 YSPTATLTGILTMDMANTINGTAWNNALWTLAMILLLISF 281


>gi|16804536|ref|NP_466021.1| hypothetical protein lmo2498 [Listeria monocytogenes EGD-e]
 gi|224499854|ref|ZP_03668203.1| hypothetical protein LmonF1_09284 [Listeria monocytogenes Finland
           1988]
 gi|254831079|ref|ZP_05235734.1| hypothetical protein Lmon1_06953 [Listeria monocytogenes 10403S]
 gi|254900364|ref|ZP_05260288.1| hypothetical protein LmonJ_11137 [Listeria monocytogenes J0161]
 gi|16411986|emb|CAD00576.1| lmo2498 [Listeria monocytogenes EGD-e]
          Length = 307

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +   +  + +       A  AA        +    +L P+++++  IP + +   
Sbjct: 83  ALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFI 142

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V +  +   G   G   A +           + S+  ++ ++PR   E S +   
Sbjct: 143 GLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSV-DAIKSVPRHYREASLALGA 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + +Q  W + +  S  G++  ++  M+  +   +A +M++                 T I
Sbjct: 202 TRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSI 261

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              G+G+ +   +    L ++   +L M     +  + + R 
Sbjct: 262 LTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 303



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF 433
           ++  + +   +    +    IA  + I   I++           +QP  +LL   P+ V+
Sbjct: 80  LVGALPMIIGSFAVTLFAACIAGPLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVY 139

Query: 434 FPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + +S V  +           +  + +++       + ++ +    + P  ++E + + 
Sbjct: 140 GFIGLSVVVPFIRDHISGSGFGIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLAL 199

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT--------- 537
             T ++    ++L       +T  +     A+  ++  ++       + T+         
Sbjct: 200 GATRFQTIWKVVLRSSRSGILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLT 259

Query: 538 -----GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                G+G  +  + +      + + +L M  F + + RF+   
Sbjct: 260 SILTMGMGNTVMGTLDNNILWSLAMVLLAMSLFFIIVIRFIGRR 303


>gi|305433150|ref|ZP_07402306.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
 gi|304443851|gb|EFM36508.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVIGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|294632046|ref|ZP_06710606.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           e14]
 gi|292835379|gb|EFF93728.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           e14]
          Length = 239

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 74/184 (40%), Gaps = 14/184 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++  L+ +   A L  + R L   ++ +  I+ +IP L      + Y          
Sbjct: 27  LLPVLAGLVLSLPIAQLCVRFRWLYAPVLGVTTILYAIPSLAVFVVLIDYTGQ------- 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             EL  +  +    +  +  ++   + ++P++    + +  L   ++++ + +P ++P +
Sbjct: 80  -TELTVMIPLAVYSLVVLVPAIVDGVRSVPQETLAAATAMGLGPLRRYFQVQLPIALPAI 138

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + ++       V +  ++ VG  +     +G+ +  A           ++LT  G+ 
Sbjct: 139 IAGLRVA------AVSSISLVSVGMLIGNQGALGNLLNDANIYHRPELAWNSVLTTAGLA 192

Query: 253 FLYD 256
            L D
Sbjct: 193 ILVD 196



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 6/162 (3%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLI--IIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
             F     L   WLG I +     L+  +   ++ +P+         + + +     +L 
Sbjct: 3   RFFDLPSDLQHDWLGLIGLHLREALLPVLAGLVLSLPIAQLCVRFRWLYAPVLGVTTILY 62

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           A P+   F +++       L   + L++  +      I    + G  + P +    A++ 
Sbjct: 63  AIPSLAVFVVLIDYTGQTELTVMIPLAVYSLVVLVPAI----VDGVRSVPQETLAAATAM 118

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +   R +  + LP   P  + G   A   + +   V  +  
Sbjct: 119 GLGPLRRYFQVQLPIALPAIIAGLRVAAVSSISLVSVGMLIG 160


>gi|289803509|ref|ZP_06534138.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 197

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S      +  + +   ++ +L            S      +  +L+++Q+IP +  + 
Sbjct: 1   PRSFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVVAVW 60

Query: 118 FTVVYFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                   L       AE          A+ A+    +  +   +   L  +PRD+ E +
Sbjct: 61  PADRAVGRLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           R+  +S  Q+F ++ +P ++P  + ++ + M       VA+ +I  G       G G+ +
Sbjct: 121 RAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALV 173

Query: 230 ALAIKEQDLLAILYAMLTMLGVIF 253
              +    +  +L  ++ ++ +  
Sbjct: 174 FQGLLSSAIDLVLLGVIPVIALAV 197



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 19/193 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP-ANVFFP---------- 435
           +  +   ++ A  I +P+G+W  F       +     ++   P     +P          
Sbjct: 12  LMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVVAVWPADRAVGRLVK 71

Query: 436 -LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                              + ++      ++  V+AG +  P D  E A +  ++  + +
Sbjct: 72  QFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRF 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++ LP   P ++             ++ + +   G       G GA + +     +   
Sbjct: 132 RHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDL 184

Query: 555 VVLGVLIMCCFVL 567
           V+LGV+ +    +
Sbjct: 185 VLLGVIPVIALAV 197


>gi|184199680|ref|YP_001853887.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
 gi|183579910|dbj|BAG28381.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
          Length = 250

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 92/203 (45%), Gaps = 12/203 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++ + A    ++ +  +V+ LL +   A LAA +R L  V V    ++ +IP L   
Sbjct: 7   NWPAVLELAGAHLVQSVIPVVVGLLMSVPLARLAAGNRWLRPVFVTGSSLLYTIPSL--- 63

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             T+   + L  G  I + +  + A+    +  +  S   +  ++ RD+ + + +     
Sbjct: 64  --TLFVVLPLVLGTRITSVVNVVVALTLYVIAILVRSCVDAFESLDRDVLQAATAMGYKP 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            ++F+ + +P ++P ++  + ++       V    M+ VG  VI +  +G+     ++  
Sbjct: 122 ARRFFGVELPLAVPVMIAGLRVA------TVSNISMVSVG-AVIGIQSLGTLFTDGLRRS 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            +  I+  ++  + +  + DQLL
Sbjct: 175 IIAEIVVGIVATVVIAVVLDQLL 197



 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 73/202 (36%), Gaps = 14/202 (6%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +   V+ L    + + V+ +++  ++ +P+         +       + LL   P+   F
Sbjct: 7   NWPAVLELAGAHLVQSVIPVVVGLLMSVPLARLAAGNRWLRPVFVTGSSLLYTIPSLTLF 66

Query: 435 ---PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PLV+       +N  + L+L +I      ++ + +    +   D  + A++      
Sbjct: 67  VVLPLVLGTRITSVVNVVVALTLYVIAI----LVRSCVDAFESLDRDVLQAATAMGYKPA 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R +  + LP   P  + G   A     +   V  V            LG    +   +  
Sbjct: 123 RRFFGVELPLAVPVMIAGLRVATVSNISMVSVGAVIGIQS-------LGTLFTDGLRRSI 175

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
             E+V+G++      + L++ L
Sbjct: 176 IAEIVVGIVATVVIAVVLDQLL 197


>gi|121612431|ref|YP_001000317.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005266|ref|ZP_02271024.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87250397|gb|EAQ73355.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 362

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVIGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|325964042|ref|YP_004241948.1| ABC-type proline/glycine betaine transporter, permease
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470129|gb|ADX73814.1| ABC-type proline/glycine betaine transport system, permease
           component [Arthrobacter phenanthrenivorans Sphe3]
          Length = 243

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 17/229 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + + A +  L  L  MV+ L  +   A LA ++R L  V++    ++ +IP L   
Sbjct: 7   NSGMVLERAGQHLLLALVPMVLGLAISIPLAQLARQNRPLRSVVLTASSLLYTIPSLALF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                       G  I   L  + A+    V  +  +   +  ++  D+ + + +     
Sbjct: 67  IILPTIL-----GTRILDPLNVVVALTIYAVALLVRAALDAFDSVSGDVSQAAVAMGYKP 121

Query: 177 WQKFWYLGVPFSMPGLVWNMM-MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             +F ++ +P S+P L   +  +S+S      VA+ ++ +G+       +G      ++ 
Sbjct: 122 LARFLHVDLPLSLPVLFAGLRVVSVSNISLVSVAA-LLGIGN-------LGMLFTSGLQR 173

Query: 236 QDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGIYPA 281
             +  I+  ++ +L +  L D    LL R +  W    R E       +
Sbjct: 174 GFITEIVVGIIAILILALLMDAFLVLLERLVTPWERAGRRENREQEAAS 222



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 15/194 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +V +++   I IP+         + S +   + LL   P+   F ++ + +    L
Sbjct: 19  LLLALVPMVLGLAISIPLAQLARQNRPLRSVVLTASSLLYTIPSLALFIILPTILGTRIL 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +P   +  L I+     ++   +    +   D  + A +        + ++ LP   P  
Sbjct: 79  DPLNVVVALTIYAVA-LLVRAALDAFDSVSGDVSQAAVAMGYKPLARFLHVDLPLSLPVL 137

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG-------V 559
             G         +   V+ +   G+       LG       ++G   E+V+G        
Sbjct: 138 FAGLRVVSVSNISLVSVAALLGIGN-------LGMLFTSGLQRGFITEIVVGIIAILILA 190

Query: 560 LIMCCFVLALNRFL 573
           L+M  F++ L R +
Sbjct: 191 LLMDAFLVLLERLV 204


>gi|253568748|ref|ZP_04846159.1| putrescine transport system permease potH [Bacteroides sp. 1_1_6]
 gi|298387171|ref|ZP_06996724.1| putrescine transport system permease protein PotH [Bacteroides sp.
           1_1_14]
 gi|251842821|gb|EES70901.1| putrescine transport system permease potH [Bacteroides sp. 1_1_6]
 gi|298259840|gb|EFI02711.1| putrescine transport system permease protein PotH [Bacteroides sp.
           1_1_14]
          Length = 266

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 8/187 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKV 131
           +   +I +L  +  A + + S+      + +L I+   + IL     TV  F       V
Sbjct: 72  IITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SV 128

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A IF +  + +  M + +Y +L  +     E ++    +  Q F+   +P SMPG
Sbjct: 129 PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG 188

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +MM           +E++ + +  +     G+ I   I            L ML +
Sbjct: 189 VMSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLL 244

Query: 252 IFLYDQL 258
           I      
Sbjct: 245 IAATSLF 251



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN--HFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  V   +      +  +  H T  +            T    + 
Sbjct: 10  SSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSIG 69

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II ++I I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 70  IAIITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 129

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 130 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPGV 189

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 190 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 245

Query: 567 LALNRF 572
            A + F
Sbjct: 246 AATSLF 251


>gi|29346700|ref|NP_810203.1| putrescine transport system permease potH [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338597|gb|AAO76397.1| putrescine transport system permease protein potH [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 258

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 8/187 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKV 131
           +   +I +L  +  A + + S+      + +L I+   + IL     TV  F       V
Sbjct: 64  IITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SV 120

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A IF +  + +  M + +Y +L  +     E ++    +  Q F+   +P SMPG
Sbjct: 121 PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG 180

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +MM           +E++ + +  +     G+ I   I            L ML +
Sbjct: 181 VMSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLL 236

Query: 252 IFLYDQL 258
           I      
Sbjct: 237 IAATSLF 243



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN--HFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  V   +      +  +  H T  +            T    + 
Sbjct: 2   SSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSIG 61

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II ++I I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 62  IAIITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 121

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 122 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPGV 181

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 182 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 237

Query: 567 LALNRF 572
            A + F
Sbjct: 238 AATSLF 243


>gi|228474198|ref|ZP_04058935.1| D-methionine transport system permease protein MetI [Staphylococcus
           hominis SK119]
 gi|314935141|ref|ZP_07842494.1| D-methionine ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|228271893|gb|EEK13230.1| D-methionine transport system permease protein MetI [Staphylococcus
           hominis SK119]
 gi|313656476|gb|EFS20215.1| D-methionine ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 219

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           ++D   L Q    T   +  +++I  L       L   +R+        +  +L PI++I
Sbjct: 5   SIDSSQLMQALYETLYMVTVSLIIGALIGIPLGILLVVTRKHGIWPNVVIHQILNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLVAGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   +  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRHFLLPEALGSLVLAITTAIIG 158



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V V +II ++I IP+GI +             I   + P   +L 
Sbjct: 7   DSSQLMQALYETLYMVTVSLIIGALIGIPLGILLVVTRKHGIWPNVVIHQILNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +      ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLVAGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  R+ +LP      V    TA  G
Sbjct: 126 KAMGASPLQIIRHFLLPEALGSLVLAITTAIIG 158


>gi|134292168|ref|YP_001115904.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
 gi|134135325|gb|ABO56439.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia vietnamiensis G4]
          Length = 388

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 76/198 (38%), Gaps = 9/198 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A+R       ++  +L+          +   +  V++P+L+I+Q++P +      + 
Sbjct: 178 WREATRHVALAGGSVAAALVAGLPLGIACMRFASVRTVVMPVLNIVQTVPSIAMYGLMMA 237

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 238 PLGLLAARVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLAQVPPHVTEAARAMG 297

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALA 232
           ++  Q+   + +  ++P ++  + + +        VA+ +   G       GIG   A  
Sbjct: 298 MTRVQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAADL 357

Query: 233 IKEQDLLAILYAMLTMLG 250
           +    +  I  A+   + 
Sbjct: 358 VLLGAIPTIALALTAAVV 375



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  A +  +P+GI       + + + P   ++   P+   + L+++ +        L  +
Sbjct: 192 VAAALVAGLPLGIACMRFASVRTVVMPVLNIVQTVPSIAMYGLMMAPLGLLAARVPLAAA 251

Query: 454 L------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L             +   +   I  +V+ G +  P    E A +  +T  +    + L  
Sbjct: 252 LGIRGIGVAPAVLALFLYSLLPIASSVVVGLAQVPPHVTEAARAMGMTRVQRLLRVDLVL 311

Query: 502 IFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             P  ++G           + + + +   G       G+G   A+    G+ P + L + 
Sbjct: 312 ALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAADLVLLGAIPTIALALT 371

Query: 561 IMCCF 565
               F
Sbjct: 372 AAVVF 376


>gi|318062281|ref|ZP_07981002.1| ABC transporter permease [Streptomyces sp. SA3_actG]
          Length = 224

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L  ++IS L     A +     R G + V + +I +++P         V  +
Sbjct: 27  LLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLANIGRAVPTFA------VLVL 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       +E   + A+    V  +  + Y  +  + R++   +R   ++G Q  W + 
Sbjct: 81  LLLTPVGRLSEGPTVIALVLFAVPPLLTNAYVGMRGVDREVVRAARGMGMTGRQLLWRVE 140

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  + ++
Sbjct: 141 LPLAAPLVLTGVRIA 155



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   +V ++I+ ++ +PV + +G      +     A
Sbjct: 7   TWDWLSDPAHWSGENGIAHRLLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLA 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++       L+    +  L++F     +L N   G      +    
Sbjct: 67  NIGRAVPTFAVL-VLLLLTPVGRLSEGPTVIALVLF-AVPPLLTNAYVGMRGVDREVVRA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 125 ARGMGMTGRQLLWRVELPLAAPLVLTGVRIAA 156


>gi|257464210|ref|ZP_05628590.1| phosphate ABC transporter, inner membrane subunit PstA
           [Fusobacterium sp. D12]
 gi|317061731|ref|ZP_07926216.1| phosphate ABC transporter permease [Fusobacterium sp. D12]
 gi|313687407|gb|EFS24242.1| phosphate ABC transporter permease [Fusobacterium sp. D12]
          Length = 279

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 5/131 (3%)

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++IS+ F  + A      AK      ++  ++  +  IP + +  F +  F+  +   V 
Sbjct: 75  VIISVPFGVLTAIYLVEYAKENTFTRLIELMILNLAGIPSIIYGLFGMALFVISFQLGVS 134

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +   AI    V  M  +  ++L  IPR+L E S +   + WQ    + +P + PG+
Sbjct: 135 MIAGSLTLAIMCLPV--MITATKEALRAIPRELREASLALGATQWQTIQKITLPAAFPGI 192

Query: 193 VWNMMMSMSGG 203
           +  +++S+S  
Sbjct: 193 LTGVILSISRA 203



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 11/196 (5%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRV 390
           ++   +    ++       +  + + I+++ + +I   F +      +  G I   +   
Sbjct: 8   RVKWIEIGISIMGYLSIMPIFIILLYISYRGLQHISWDFLFSMPEDSMRGGGIFPAILGT 67

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCV 441
           + L ++  II +P G+               +  I+     LA  P+ ++  F + +  +
Sbjct: 68  LYLTLLTVIISVPFGVLTAIYLVEYAKENTFTRLIELMILNLAGIPSIIYGLFGMALFVI 127

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           S+      +  SL +       ++        A P + +E + +   T W+  + I LP 
Sbjct: 128 SFQLGVSMIAGSLTLAIMCLPVMITATKEALRAIPRELREASLALGATQWQTIQKITLPA 187

Query: 502 IFPYYVTGAITACGGA 517
            FP  +TG I +   A
Sbjct: 188 AFPGILTGVILSISRA 203


>gi|226310064|ref|YP_002769958.1| phosphate ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093012|dbj|BAH41454.1| probable phosphate ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 296

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 86/215 (40%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRTTL 70
           R    +  L+A +++  ++ +L   + +     ++        I      +      +  
Sbjct: 8   RAATVVLTLIAVLIIGTLVGLLGFILSQGWHKLNLDFLTSPPDIVNAGGGIGPQLFNSLY 67

Query: 71  RMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+I+L          A+     ++   +   ++++ S+P +    F ++ F+N+ 
Sbjct: 68  LLVLTMLIALPLGIGAGIYMAEYAPDNKITQFIRMSIEVLSSLPSIVVGLFGLLVFVNMT 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    +F   +  +      +L N+PR  +E S +  ++ W+    + +P 
Sbjct: 128 GWGYTLFGGALALTVFNLPL--LVRVTEDALRNVPRSQKEASLALGITKWRTIVSVILPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++PG++   +++ SG  F   A+ +   G +   L
Sbjct: 186 ALPGILTGAILA-SGRVFGEAAALLFTAGMSSPNL 219



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 62/186 (33%), Gaps = 10/186 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I     + G  +   W  +       +  D++         +F  + L+++  +I +
Sbjct: 19  VLIIGTLVGLLGFILSQGWHKLNLDFLT-SPPDIVNAGGGIGPQLFNSLYLLVLTMLIAL 77

Query: 403 PVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIFGT 460
           P+GI  G      +      Q +  +       P +VV                 +  G 
Sbjct: 78  PLGIGAGIYMAEYAPDNKITQFIRMSIEVLSSLPSIVVGLFGLLVFVNMTGWGYTLFGGA 137

Query: 461 QWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
               +FN               P   KE + +  IT WR    +ILP   P  +TGAI A
Sbjct: 138 LALTVFNLPLLVRVTEDALRNVPRSQKEASLALGITKWRTIVSVILPAALPGILTGAILA 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 SGRVFG 203


>gi|153007641|ref|YP_001368856.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559529|gb|ABS13027.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 248

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 17/210 (8%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILD 105
           + + VP+  D  +      +    +  A + S +     A    + +      +   +++
Sbjct: 35  VDEGVPVIYDRANFVTLTLQHLGLVALAALASTIVAVSMAIFVTRKQGAEFLPLSRSLVN 94

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I Q+ P +  L   V  F           +   + A+F   +  +  +    L  +P  +
Sbjct: 95  IGQTFPPVAVLALAVPVFG--------FGDKPTLIALFLYGLLPIFENTLTGLTTLPPPV 146

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E +R   ++  Q+   + VP +MP ++  + +S+  G              + +    +
Sbjct: 147 VEAARGMGMTSAQRLVKVEVPLAMPVILAGIRLSVVIGLATATI-------GSTVAARTL 199

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           G  I   +   +L  +L   L +  +  L 
Sbjct: 200 GEVIIAGLISNNLAFVLQGGLVVAALAILI 229



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V    +      + L L  +      I  N + G +  P    
Sbjct: 92  LVNIGQTFPPVAVLALAVPVFGFGDKPTLIALFLYGLL----PIFENTLTGLTTLPPPVV 147

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A    +T  +    + +P   P  + G   +        ++    +     +    LG
Sbjct: 148 EAARGMGMTSAQRLVKVEVPLAMPVILAGIRLS-------VVIGLATATIGSTVAARTLG 200

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I       +   V+ G L++    + +
Sbjct: 201 EVIIAGLISNNLAFVLQGGLVVAALAILI 229


>gi|256844509|ref|ZP_05549995.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           125-2-CHN]
 gi|293381059|ref|ZP_06627080.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus 214-1]
 gi|256613587|gb|EEU18790.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           125-2-CHN]
 gi|290922359|gb|EFD99340.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus 214-1]
          Length = 331

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 16/210 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDI---VPITLDVHSLPQYASRTTLRM--LSAM 76
           +L  VLV+ II  + +    T V   +  I        D      +     + +      
Sbjct: 60  VLIIVLVVSIIGFVGYHGLATFVSDHVNVIHFLTSTDWDPGEGKNHVGAAVMIVTSFLVT 119

Query: 77  VISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           +++ L    +A   A       S++    L  + +++  IP + +    LT  V     L
Sbjct: 120 LLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELLVGIPSVVYGFLGLTIIVPVIRKL 179

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  +++ + 
Sbjct: 180 FGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGSTHWQTIYHVVLR 238

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + P ++  ++  M+  +   +A +M++  
Sbjct: 239 VATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 78/236 (33%), Gaps = 25/236 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA------------WQSIGYIVNHF 371
           +   P          +    L I    V+    IG                 I ++ +  
Sbjct: 37  KLTKPSKETHQEYWGKGLTYLAIVLIIVLVVSIIGFVGYHGLATFVSDHVNVIHFLTSTD 96

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLL 425
                        + +    ++ ++A+++  P  I I            ++ +Q   +LL
Sbjct: 97  WDPGEGKNHVGAAVMIVTSFLVTLLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELL 156

Query: 426 AAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPND 478
              P+ V+      ++V  +   +      +  + L++F      + +  +    A P+ 
Sbjct: 157 VGIPSVVYGFLGLTIIVPVIRKLFGGTGFGILAATLVLFVMVLPTITSLTVDSLKAVPSH 216

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           F++ + +   T W+   +++L    P  +T  I     A+  ++  ++     + +
Sbjct: 217 FRKASMALGSTHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIGNAVLM 272


>gi|229815114|ref|ZP_04445451.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM
           13280]
 gi|229809344|gb|EEP45109.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM
           13280]
          Length = 309

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 12/227 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYA 65
              ++  +    +F   AF+ V+ ++ I    + +      DI      +        + 
Sbjct: 27  RSTYLKEKGLQYLFFACAFLAVVTVLLIFAFTMMQAAPVFTDIGLANFFSFTWAPTEGHY 86

Query: 66  SRTTLRMLSAMVI--SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLT 117
              +L   +A+V   +L+         A       S R+  ++ P +D++  IP + +  
Sbjct: 87  GIMSLAAGTALVTVGALVIGVPLGVGTAVYLTEIASARVRALISPAVDLLAGIPSIIYGF 146

Query: 118 FTVVY---FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
           F +V    F+    G +    L A F +    V  +T     +L +IP  + E S +   
Sbjct: 147 FGMVIIRPFVADLTGGLGFGALTAWFVLAIMIVPTITTLTIDALNSIPMGIREASFAMGA 206

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + WQ  + + +P +  G+V  +++ M       +A  M+V    VIP
Sbjct: 207 TKWQTIYKVVLPAAKFGIVDAVVLGMGRAIGETMAVLMVVGNAPVIP 253



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 14/177 (7%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIII-ASIIWIPVGIWIGF------RPHISSKIQ 419
           + N F++         G +++     L+ + A +I +P+G+             + + I 
Sbjct: 71  LANFFSFTWAPTEGHYGIMSLAAGTALVTVGALVIGVPLGVGTAVYLTEIASARVRALIS 130

Query: 420 PFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGA 472
           P   LLA  P+ ++    +  +          L      +  ++       +    I   
Sbjct: 131 PAVDLLAGIPSIIYGFFGMVIIRPFVADLTGGLGFGALTAWFVLAIMIVPTITTLTIDAL 190

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           ++ P   +E + +   T W+    ++LP      V   +   G A   ++   +   
Sbjct: 191 NSIPMGIREASFAMGATKWQTIYKVVLPAAKFGIVDAVVLGMGRAIGETMAVLMVVG 247


>gi|302523298|ref|ZP_07275640.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|302432193|gb|EFL04009.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 224

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L  ++IS L     A +     R G + V + +I +++P         V  +
Sbjct: 27  LLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLANIGRAVPTFA------VLVL 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       +E   + A+    V  +  + Y  +  + R++   +R   ++G Q  W + 
Sbjct: 81  LLLTPVGKLSEGPTVIALVLFAVPPLLTNAYVGMRGVDREVVRAARGMGMTGRQLLWRVE 140

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  + ++
Sbjct: 141 LPLAAPLVLTGVRIA 155



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   +V ++I+ ++ +PV + +G      +     A
Sbjct: 7   TWDWLSDPAHWSGENGIAHRLLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLA 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++       L+    +  L++F     +L N   G      +    
Sbjct: 67  NIGRAVPTFAVL-VLLLLTPVGKLSEGPTVIALVLF-AVPPLLTNAYVGMRGVDREVVRA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 125 ARGMGMTGRQLLWRVELPLAAPLVLTGVRIAA 156


>gi|319784153|ref|YP_004143629.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170041|gb|ADV13579.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 387

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++ +++       L  +   L   ++ +L+I+Q+IP +      +     +      
Sbjct: 184 LGSLLAAVVVGLPLGILCHRVESLRAGVLNVLNIIQTIPSIALFGLLIAPLGWVATHVPG 243

Query: 133 GAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            A L         A  A+F   +  +  +    L  +PR   + +R   ++  Q+ + + 
Sbjct: 244 AAALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRTANDAARGMGMTDRQRLFGVE 303

Query: 185 VPFSMPGLVWNMMM 198
            P + P ++  + +
Sbjct: 304 FPLAFPVILTGIRI 317



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 68/194 (35%), Gaps = 14/194 (7%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L  +      +       +  + I  +W ++  +  +F   D  +      +T+   + 
Sbjct: 128 RLNLSPLARVGVLAVSALAIGLLLISGSWDNLSILKEYFNRADSFWAEGSKHVTLA--LG 185

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++ A ++ +P+GI       + + +     ++   P+   F L+++ + +   +     
Sbjct: 186 SLLAAVVVGLPLGILCHRVESLRAGVLNVLNIIQTIPSIALFGLLIAPLGWVATHVPGAA 245

Query: 453 SL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +L             +   +   ++ N + G +  P    + A    +T  +    +  P
Sbjct: 246 ALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRTANDAARGMGMTDRQRLFGVEFP 305

Query: 501 GIFPYYVTGAITAC 514
             FP  +TG     
Sbjct: 306 LAFPVILTGIRIVL 319


>gi|284163960|ref|YP_003402239.1| binding-protein-dependent transporters inner membrane component
           [Haloterrigena turkmenica DSM 5511]
 gi|284013615|gb|ADB59566.1| binding-protein-dependent transport systems inner membrane
           component [Haloterrigena turkmenica DSM 5511]
          Length = 258

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 11/203 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           +W   V G        S G +V   T    LY       T+  V+    +       + +
Sbjct: 26  WWAVTVVGDVPSFVLPSPGAVVARLTGNPTLYA-HNAWYTLETVLYGGSVGIAAGFLLAV 84

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            + + P   + + P+   +   P     PL++  +            + +   T + ++ 
Sbjct: 85  LVAYLPWFRTAVYPYLVAVRVLPKIAVAPLLLIYLGTG----TETAVVFVALITFFPLVL 140

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +  AG    P+  +++  S          Y+ LP   P    G   +   A   ++V+E 
Sbjct: 141 STAAGLERAPSAHRDLLRSVDAGPLERIVYVDLPYALPDVFAGLKQSVTLAVVGAVVAEW 200

Query: 527 ASWGHIHLRTTGLGAYIAESTEK 549
                  +   GLG  I   +E 
Sbjct: 201 V------IADRGLGFLILMGSEN 217



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 14/175 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T   +L    + +   F+ A L A        + P L  ++ +P +      ++Y  
Sbjct: 61  AWYTLETVLYGGSVGIAAGFLLAVLVAYLPWFRTAVYPYLVAVRVLPKIAVAPLLLIYLG 120

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   G E A +F       + +  S    L   P    ++ RS      ++  Y+ 
Sbjct: 121 T-------GTETAVVFVALI-TFFPLVLSTAAGLERAPSAHRDLLRSVDAGPLERIVYVD 172

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +P+++P +   +  S++      V +E +      I   G+G  I +  +     
Sbjct: 173 LPYALPDVFAGLKQSVTLAVVGAVVAEWV------IADRGLGFLILMGSENVRPD 221


>gi|108801927|ref|YP_642124.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871079|ref|YP_941031.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126437908|ref|YP_001073599.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772346|gb|ABG11068.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697168|gb|ABL94241.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126237708|gb|ABO01109.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 264

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 69/202 (34%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L           + A+V S L       +   + +   ++V  ++ ++++P      
Sbjct: 20  PAGLGARIVEHLEYTVIAVVFSALIAVPLGMIIGHTGKGTFLVVTGVNALRALP------ 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L         +    A+    +  +    Y  + N+   + + +RS  ++  
Sbjct: 74  --TLGVLLLGVLLWGLGLVGPTVALMLLGIPPLLAGTYSGIANVDPAVVDAARSMGMTER 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + VP ++P ++  +  +        +             L G+G Y+   IK ++
Sbjct: 132 RVLLRVEVPIALPLILGGLRTA-------TLQIVATATVAAYASLGGLGRYLIDGIKVRE 184

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               L   L +  +  + D LL
Sbjct: 185 FYLALVGALMVTALALILDGLL 206



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +++ +I     +     +       +   V+ ++ +++I +P+G+ IG     +  +   
Sbjct: 6   EALSFIFTAANWAGPAGLGARIVEHLEYTVIAVVFSALIAVPLGMIIGHTGKGTFLVVTG 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V       + P + L LL I      +L    +G +       +
Sbjct: 66  VNALRALPTLGVLLLGVLLWGLGLVGPTVALMLLGIP----PLLAGTYSGIANVDPAVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S  +T  R    + +P   P  + G  TA       ++     +    +    GLG 
Sbjct: 122 AARSMGMTERRVLLRVEVPIALPLILGGLRTA-------TLQIVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +  +   F   ++G L++    L L+  L
Sbjct: 175 YLIDGIKVREFYLALVGALMVTALALILDGLL 206


>gi|298676097|ref|YP_003727847.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298289085|gb|ADI75051.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 204

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +    +   ++ S++ +   A ++ +S +L   ++ + +++Q++P    +   V    
Sbjct: 11  TLQHVTLVYLTLIASIVISIPLAFISVESEKLANWIMKVSNLLQAVPSFAVVAIVVPLIG 70

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +          A+ AI    +  +  + Y  L NI   L + +    L+ WQ   Y+ 
Sbjct: 71  IGFTP--------ALIAILVRALLPIIKNTYIGLLNIDPSLIDYAHGVGLTRWQINRYIR 122

Query: 185 VPFSMPGLVWNMMMS 199
           +P S P +   +  S
Sbjct: 123 LPNSYPAIFAGIRFS 137



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V + +I + +I IP+         +++ I   + LL A P+     +VV  +        
Sbjct: 18  VYLTLIASIVISIPLAFISVESEKLANWIMKVSNLLQAVPSFAVVAIVVPLIGIGFT--- 74

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               + ++      I+ N   G         + A    +T W+  RYI LP  +P    G
Sbjct: 75  -PALIAILVRALLPIIKNTYIGLLNIDPSLIDYAHGVGLTRWQINRYIRLPNSYPAIFAG 133

Query: 510 AITACGGA 517
              +   A
Sbjct: 134 IRFSALLA 141


>gi|238912605|ref|ZP_04656442.1| inner membrane ABC transporter permease protein YehW [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
          Length = 243

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYE 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L     + V +  + A ++ +  GI +        + +P  + +AA    FP      + 
Sbjct: 49  LALAHFWLVGISSLFAVVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG  A P     VAS   ++  +    +
Sbjct: 107 VPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYEV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +  + LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFL 573
           G L++    + ++R  
Sbjct: 216 GALLVALAAIIIDRLF 231


>gi|224583337|ref|YP_002637135.1| permease transmembrane component [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224467864|gb|ACN45694.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 243

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + ++           +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVGVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  V+    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  SM         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRASMIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+L  R
Sbjct: 215 QGALLVALAAIIIDRLFER 233



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 15/187 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHL 446
           +V I     + + VG  I        + +P  + +AA    FP      + V  + +   
Sbjct: 56  LVGISSLFAVGVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQQ 115

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L L  +      IL   +AG  A P     VAS   ++  +    + LP   P  
Sbjct: 116 PAIIALILYGVL----PILQATLAGLGAVPASVMSVASGMGMSRRQQLYQVELPLAAPVI 171

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   +       + ++         +  + LG  I       +   V+ G L++    
Sbjct: 172 LAGIRASMIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAA 224

Query: 567 LALNRFL 573
           + ++R  
Sbjct: 225 IIIDRLF 231


>gi|20808056|ref|NP_623227.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|20516636|gb|AAM24831.1| ABC-type phosphate transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
          Length = 295

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 66/182 (36%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
                +I +I  +L+  +       +            +      +   ++  ++IS+  
Sbjct: 20  FLVAFLISLIGYILYQGRTRLNLSFLTSPPKFMEAGGGIGPQLFNSIELLVITLIISVPI 79

Query: 83  TFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A+  R      V+   ++ + S+P +    F ++ F+ +          A  
Sbjct: 80  GLGAGIYMAEYARPGLFTEVIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLMAGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    V  MT     ++ ++P  L E S +   + WQ    + VP +MPG++  ++++
Sbjct: 140 LTVLNLPV--MTRVSEDAIKSVPSSLREASFALGATKWQTITKVVVPAAMPGILTGIILT 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPV 404
           F    +  +   I +Q    +   F      ++   G I   +F  + L++I  II +P+
Sbjct: 20  FLVAFLISLIGYILYQGRTRLNLSFLTSPPKFMEAGGGIGPQLFNSIELLVITLIISVPI 79

Query: 405 GIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           G+  G      ++   F +++  +       P +VV                 ++ G   
Sbjct: 80  GLGAGIYMAEYARPGLFTEVIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLMAGALA 139

Query: 463 YILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             + N+            + P+  +E + +   T W+    +++P   P  +TG I   G
Sbjct: 140 LTVLNLPVMTRVSEDAIKSVPSSLREASFALGATKWQTITKVVVPAAMPGILTGIILTAG 199

Query: 516 GAWN 519
             + 
Sbjct: 200 RIFG 203


>gi|284925876|gb|ADC28228.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 362

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVIGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|298346500|ref|YP_003719187.1| phosphate ABC transporter permease [Mobiluncus curtisii ATCC 43063]
 gi|298236561|gb|ADI67693.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Mobiluncus curtisii ATCC 43063]
          Length = 344

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 65/166 (39%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LT 117
           +   + +     +VI+  F    A        R    +  P +++   IP + +    LT
Sbjct: 120 FILGSLMTCFLGLVIATPFAVGAAVFITEIAPRAGERLFRPAVELFLGIPSVVYGWVGLT 179

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             V +  + +   + G  + A   +    ++  +T     ++  +P    E +     + 
Sbjct: 180 VLVPFIRDYFHAPLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPDHYREAAYGLGATR 239

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ  +++ +P +  G++  +++ ++  +   +A  M++     +P 
Sbjct: 240 WQSIYHIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPA 285



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 24/226 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLA 426
              T +  +  +     ++    + ++IA+   +   ++I            +P  +L  
Sbjct: 107 PDLTLRGSVGALIFILGSLMTCFLGLVIATPFAVGAAVFITEIAPRAGERLFRPAVELFL 166

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
             P+ V+         P +           ++  + +++    +  +  V     +A P+
Sbjct: 167 GIPSVVYGWVGLTVLVPFIRDYFHAPLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPD 226

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-- 535
            ++E A     T W+   +I+LP      +TG I     A+  ++   +       L   
Sbjct: 227 HYREAAYGLGATRWQSIYHIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPAD 286

Query: 536 --------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   TT + A +  +T  G     +     M   +  ++ F 
Sbjct: 287 VLSPTSSLTTAITADMGNTTNGGEHNSALW---TMALLLFLISMFF 329


>gi|284122507|ref|ZP_06386853.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Poribacteria sp. WGA-A3]
 gi|283829351|gb|EFC33747.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Poribacteria sp. WGA-A3]
          Length = 567

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 7/252 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L FVL      I +  I  T  P   +      L  H L  Y   + +   +  VI+L+
Sbjct: 318 FLWFVLTSFKSQIQVEAIPPTWWPDGSLGFYTSALSEHRLLYYIRNSVIVAGATTVIALV 377

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                A   A+ R  G     IL  +  + +   +      +  L     +      +  
Sbjct: 378 VATPAAYALARLRMAGKAW--ILGGLLCVAMFPHIVIAGPVWQILERLGGLNTHWGLVLP 435

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +  +    + +      +P +LEE +R    + WQ  + + +P + PGL    +++  
Sbjct: 436 YVSLTLPLAVWVLTTFFHELPFELEEAARIDGCTTWQALYRIVLPLAAPGLFTATILTFI 495

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI----LYAMLTMLGVIFLYDQ 257
             W     + +I+       LP +G  +           I    + A L ++ ++ L+ +
Sbjct: 496 YAWNEFFFALLILTDPEHQTLP-VGIALFQGEFTMPWGEIAAASVIATLPLIIIVLLFQR 554

Query: 258 LLFRPMIVWSNK 269
            +   +   + K
Sbjct: 555 RIINGLSAGAVK 566



 Score = 37.2 bits (85), Expect = 7.3,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 80/306 (26%), Gaps = 20/306 (6%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
           KT F R  G    +           L       R   P     +    R + +  +    
Sbjct: 252 KTLFTRTRGLWDHDLGHGFCRAGHSLPVLRPYRRVQTPATGAGMTKPLRPALIGGVLLAV 311

Query: 351 VVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIWLGCITMFRVV-----------VL 393
           +                Q     +    + D     +   ++  R++             
Sbjct: 312 LGSLCPFLWFVLTSFKSQIQVEAIPPTWWPDGSLGFYTSALSEHRLLYYIRNSVIVAGAT 371

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQL-LAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +IA ++  P    +               L +A FP  V    V   +         W 
Sbjct: 372 TVIALVVATPAAYALARLRMAGKAWILGGLLCVAMFPHIVIAGPVWQILERLGGLNTHWG 431

Query: 453 SLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L        +   V+       P + +E A     T W+    I+LP   P   T  I
Sbjct: 432 LVLPYVSLTLPLAVWVLTTFFHELPFELEEAARIDGCTTWQALYRIVLPLAAPGLFTATI 491

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                AWN    + +      H     +G  + +      + E+    +I    ++ +  
Sbjct: 492 LTFIYAWNEFFFALLILTDPEHQTLP-VGIALFQGEFTMPWGEIAAASVIATLPLIIIVL 550

Query: 572 FLWHPL 577
                +
Sbjct: 551 LFQRRI 556


>gi|227544760|ref|ZP_03974809.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300908993|ref|ZP_07126456.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
 gi|227185246|gb|EEI65317.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           CF48-3A]
 gi|300894400|gb|EFK87758.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus reuteri
           SD2112]
          Length = 212

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   +     +    +LS++ I+L+   V   L  +  +    L+    ++ SIP   F 
Sbjct: 8   NWPIMLDDVQQHATMVLSSLAIALVIAVVIILLFLRREKWLNSLIYFFSLLYSIPSFAF- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F  L P   +G + A I     S+   +  S    +  +   L EV     ++ 
Sbjct: 67  ------FALLLPISGLGMKTAIIVLTIYSEYV-LLRSFITGIRGVDPQLIEVGVGMGMTS 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F  + +P ++P +   + ++++        +  I  G       G+G  +   ++ Q
Sbjct: 120 RQVFRQIQLPLALPAIFSGIQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQ 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
            ++ IL+  +  + +  +   ++
Sbjct: 173 QVVPILWGTVLTMALTLICAGIV 195



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + IA +I + + +    R    + +  F  LL + P+  FF L++           
Sbjct: 23  VLSSLAIALVIAVVIILLFLRREKWLNSLIYFFSLLYSIPSFAFFALLLPISGLG----M 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +++   +++ +L + I G         EV     +T  + +R I LP   P   +G
Sbjct: 79  KTAIIVLTIYSEYVLLRSFITGIRGVDPQLIEVGVGMGMTSRQVFRQIQLPLALPAIFSG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   + G       GLG  + E  +      ++ G ++     L  
Sbjct: 139 IQVALASTMAMATIAATINAG-------GLGQLLFEGLQGQQVVPILWGTVLTMALTLIC 191


>gi|168186804|ref|ZP_02621439.1| phosphate ABC transporter, permease protein PstA [Clostridium
           botulinum C str. Eklund]
 gi|169295190|gb|EDS77323.1| phosphate ABC transporter, permease protein PstA [Clostridium
           botulinum C str. Eklund]
          Length = 287

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  +   +L++G+I  +L+      +    +   P +     +  +   +   ++ +++I
Sbjct: 16  VISIFVILLLVGMIGYILYRGM-PNLSVKFLFGKPSSKVGGGIGLHLFNSFYMLVVSLII 74

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++          A+  + G +L  I   ++ + S+P +    F +++F+ +       + 
Sbjct: 75  TVPIGIGAGIYLAEYAKQGKILNTIRLCIETIASLPSIVVGLFGLLFFVGILGWGY--SI 132

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +A   +I    + +MT     +L  +P  ++E S     + WQ    + +P ++P ++  
Sbjct: 133 IAGALSITILNLPSMTTVTESALRAVPVTIKEGSLGLGATKWQTIKKIILPSAIPQILTG 192

Query: 196 MMMSMS 201
           +++S  
Sbjct: 193 IILSAG 198



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 20/192 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQS-----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           ++ IF   ++ G+   I ++      + ++    + +    +      + + +VV +II 
Sbjct: 16  VISIFVILLLVGMIGYILYRGMPNLSVKFLFGKPSSKVGGGIGLHLFNSFYMLVVSLIIT 75

Query: 398 SIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
             I I  GI++         +       + +A+ P+     +VV           L    
Sbjct: 76  VPIGIGAGIYLAEYAKQGKILNTIRLCIETIASLPS-----IVVGLFGLLFFVGILGWGY 130

Query: 455 LMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            +I G     + N         +   A P   KE +     T W+  + IILP   P  +
Sbjct: 131 SIIAGALSITILNLPSMTTVTESALRAVPVTIKEGSLGLGATKWQTIKKIILPSAIPQIL 190

Query: 508 TGAITACGGAWN 519
           TG I + G  + 
Sbjct: 191 TGIILSAGRIFG 202


>gi|304395790|ref|ZP_07377673.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304357084|gb|EFM21448.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 243

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 76/204 (37%), Gaps = 21/204 (10%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLT 117
            Q        +++A +++++       L   +RR G    P+++ +    Q+IP +  L 
Sbjct: 47  WQLTLAHLFLVITASLLAIVIGIGSGVLV--TRRAGRAFRPLIETIVAAGQTIPPVAVLA 104

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V                 A+ A+    +  +       + ++P    E++    +S W
Sbjct: 105 IAVPVMG--------FGAWPAVVALLLYGLLPILQGTLAGIDSVPSSSREIAIGVGMSNW 156

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q+ W + +  + P ++  +  S       V+ +       + +    +GS + + +   +
Sbjct: 157 QRLWQIELALAAPVIIAGIRTS-------VIINIGTAAIASTVGAKSLGSPVIIGLSGFN 209

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
              ++   L +  +  + D+L  R
Sbjct: 210 TAYVIQGALLVALLAIVSDRLFER 233



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L + +  ++  + +      + +               L    +F V+   ++A +I I
Sbjct: 10  WLVLLYGALLTLMPLSGPLFHLWFPELARPLYQQESFWQLTLAHLFLVITASLLAIVIGI 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLL----AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             G+ +          +P  + +       P      + V  + +      + L L  + 
Sbjct: 70  GSGVLV--TRRAGRAFRPLIETIVAAGQTIPPVAVLAIAVPVMGFGAWPAVVALLLYGLL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                     +AG  + P+  +E+A    ++ W+    I L    P  + G  T+     
Sbjct: 128 PIL----QGTLAGIDSVPSSSREIAIGVGMSNWQRLWQIELALAAPVIIAGIRTSVIINI 183

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + ++         +    LG+ +       +   V+ G L++    +  +R  
Sbjct: 184 GTAAIA-------STVGAKSLGSPVIIGLSGFNTAYVIQGALLVALLAIVSDRLF 231


>gi|194595542|gb|ACF77053.1| putative ABC-type phosphate transporter permease protein [Halomonas
           sp. HAL1]
          Length = 388

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             +      T + M+  + IS     + A      A   R    +   ++ + +IP + F
Sbjct: 164 AGILSAVVGTVMTMIVTLAISFPIGVMTAVYLEEFAPDNRFTQAIEININNLAAIPSILF 223

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +  F+N + G    + LA    +    +  +  S   +L ++P  +   +     S
Sbjct: 224 GLLGLAIFINFF-GVPRSSPLAGGMTLALMTLPVIIISTRTALRSVPDSIRHAAFGVGCS 282

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            WQ      +P +MPG++   ++ ++  
Sbjct: 283 RWQVVRDHVLPLAMPGIMTGSIIGLAQA 310



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           V+ +I+   I  P+G+               +  I+     LAA P+ +F  L ++    
Sbjct: 174 VMTMIVTLAISFPIGVMTAVYLEEFAPDNRFTQAIEININNLAAIPSILFGLLGLAIFIN 233

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   + +   T   I+ +      + P+  +  A     + W+  R  +LP
Sbjct: 234 FFGVPRSSPLAGGMTLALMTLPVIIISTRTALRSVPDSIRHAAFGVGCSRWQVVRDHVLP 293

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG+I     A
Sbjct: 294 LAMPGIMTGSIIGLAQA 310


>gi|298386615|ref|ZP_06996171.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           1_1_14]
 gi|298260992|gb|EFI03860.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           1_1_14]
          Length = 291

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRT 68
           S+R+   IF LL+  +V+ +  IL   I +         I     D      +      T
Sbjct: 13  SQRLAFGIFRLLSLCIVLILFAILGFIIYKGAGAISWEFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  G    S  +I +  T       IW   +  F ++V    +++   
Sbjct: 28  IVLILFAILGFIIYKGAGAISWEFITSAPTDGMTGGGIWPAIVGTFYLMVG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G           +   I+     L+  P+ VF  F + +        +  L  S
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGS 144

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|253572871|ref|ZP_04850269.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837503|gb|EES65596.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 291

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S+R+   IF LL+  +V+ +  IL   I +                 +    +      T
Sbjct: 13  SQRLAFGIFRLLSLCIVLILFAILGFIIYKGAGAISWDFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  G    S  +I +  T       IW   +  F ++V    +++   
Sbjct: 28  IVLILFAILGFIIYKGAGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G           +   I+     L+  P+ VF  F + +        +  L  S
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGS 144

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|189463174|ref|ZP_03011959.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136]
 gi|189430153|gb|EDU99137.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136]
          Length = 266

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 11/259 (4%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           + N+   F SR+ +   + + + + VI  ++ I+++   +      + +           
Sbjct: 1   MKNLQHFFSSRKSWVLPYLIFSVIFVIIPLLLIVVYAFTDDMGHLTLANFSKF-FAHSES 59

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFT 119
                 +    +   +  +L  +  A +   S+ L     L+ +  +   + IL     T
Sbjct: 60  VNTFVYSIGIAILTTLGCILLGYPVAWILNNSKNLSYSRTLIMLFILPMWVNILVRTLAT 119

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V  F      ++   E A IF +  + +  M + +Y +L  + R   E ++    + +Q 
Sbjct: 120 VALFDFC---RLPLGEGALIFGMIYNFIPFMIYPIYNTLQKMDRSYIEAAQDLGANSFQV 176

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P SMPG+V  +MM           +E++ + +  +     G+ I   I      
Sbjct: 177 FWKVIFPLSMPGVVSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSLWN 232

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ML +I      
Sbjct: 233 YGAALSLIMLFLIAATSLF 251



 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 67/209 (32%), Gaps = 11/209 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMF 388
           + R S++L    F V+  +   + I   +    + H T  +                ++ 
Sbjct: 9   SSRKSWVLPYLIFSVIFVIIPLLLIVVYAFTDDMGHLTLANFSKFFAHSESVNTFVYSIG 68

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHL 446
             ++  +   ++  PV   +    ++S         +     N+    +  V+   +  L
Sbjct: 69  IAILTTLGCILLGYPVAWILNNSKNLSYSRTLIMLFILPMWVNILVRTLATVALFDFCRL 128

Query: 447 NPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  +  +       +++ +          + E A       ++ +  +I P   P 
Sbjct: 129 PLGEGALIFGMIYNFIPFMIYPIYNTLQKMDRSYIEAAQDLGANSFQVFWKVIFPLSMPG 188

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHL 534
            V+G +       +   ++E+ +  +I L
Sbjct: 189 VVSGIMMVFMPTISTFAIAELLTMNNIKL 217


>gi|115377139|ref|ZP_01464353.1| phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365848|gb|EAU64869.1| phosphate ABC transporter, permease protein PstC [Stigmatella
           aurantiaca DW4/3-1]
          Length = 296

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 75/187 (40%), Gaps = 16/187 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
             FT+Q V  +  +  I +F   +    ++ ++ +P+G+             +   ++P 
Sbjct: 50  PTFTWQPVSSIPKVSMIPLFIGTLKTTFVSMLVAVPLGVAGALFAAEFAPRRLREFLKPI 109

Query: 422 AQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
            +LLA  P+ V     +  ++        +    N  ++ L +      ++F V     +
Sbjct: 110 IELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAGLGLALAIVPVIFTVAEDALT 169

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P  ++E + +   T W     ++LP   P  +   +   G A   +++  + + G+  
Sbjct: 170 AVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGFGRAIGETMIILM-ASGNAA 228

Query: 534 LRTTGLG 540
           + ++ LG
Sbjct: 229 IVSSSLG 235



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY- 122
           T      +M++++      A  AA+   RRL   L PI++++  IP  +LGF    V+  
Sbjct: 72  TLKTTFVSMLVAVPLGVAGALFAAEFAPRRLREFLKPIIELLAGIPSVVLGFFALMVLAT 131

Query: 123 -FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              + +        + A   +  + V  +      +L  +PR   E S +   + W+  W
Sbjct: 132 LLQDTFGFTYRLNAVVAGLGLALAIVPVIFTVAEDALTAVPRSYREASLALGATPWETAW 191

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + +P + PG++   ++     
Sbjct: 192 KVVLPAAAPGILAACVLGFGRA 213


>gi|322833740|ref|YP_004213767.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168941|gb|ADW74640.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 252

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 75/204 (36%), Gaps = 16/204 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L +  + +I+++           +R  G     +++ + ++      TF  V  + +  
Sbjct: 55  LLLVGISSLIAVIIGVAAGV--GVTRPAGKEFRSLVETLVAMGQ----TFPPVAVLAVAV 108

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +  +E  AI A+    +  +       + ++P    E+++   +S WQ    + +P +
Sbjct: 109 PVMGFSEKPAIIALVLYGLLPILQGTIAGIESVPASAREIAQGVGMSRWQMLRKVEIPLA 168

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P ++  +  S+        A+    VG        +GS I + +   +   +L   + +
Sbjct: 169 APVIISGIRTSVII--NIGTAAIASSVGTLS-----LGSPIIIGLSGFNTAYVLQGAVIV 221

Query: 249 LGVIFLYDQLLFR---PMIVWSNK 269
             +    D L  R    +  W  +
Sbjct: 222 ALLAICVDMLFERWSQGLQRWQQR 245



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 9/185 (4%)

Query: 391 VVLIIIASIIWIPVGIW--IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           ++L+ I+S+I + +G+   +G       + +   + L A         V++         
Sbjct: 55  LLLVGISSLIAVIIGVAAGVGVTRPAGKEFRSLVETLVAMGQTFPPVAVLAVAVPVMGFS 114

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                + ++      IL   IAG  + P   +E+A    ++ W+  R + +P   P  ++
Sbjct: 115 EKPAIIALVLYGLLPILQGTIAGIESVPASAREIAQGVGMSRWQMLRKVEIPLAAPVIIS 174

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G  T+       + ++           T  LG+ I       +   V+ G +I+    + 
Sbjct: 175 GIRTSVIINIGTAAIASSVG-------TLSLGSPIIIGLSGFNTAYVLQGAVIVALLAIC 227

Query: 569 LNRFL 573
           ++   
Sbjct: 228 VDMLF 232


>gi|309777774|ref|ZP_07672722.1| spermidine/putrescine ABC transporter,
           spermidine/putrescine-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914458|gb|EFP60250.1| spermidine/putrescine ABC transporter,
           spermidine/putrescine-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 631

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 22/252 (8%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-------HSLPQYASRTTL 70
           +   +LA V+V     IL   I      R +      +L          ++ +    T +
Sbjct: 7   SRRVILALVMVFFYFPILYMLIFSFNGSRSLTSFDGFSLQWYHKMFNDRNMMEAIYYTLV 66

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             + A  +S +   + A   +KSRR   ++  ++  +  +PI+     T V  M  Y   
Sbjct: 67  TAVVATFVSTIVGTITAIGLSKSRR---IVREVVQQINDLPIMNPEIVTAVGLMLFYVSL 123

Query: 131 VI-GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +    L  + A        +  S+   L  +  +L E +        Q  W + VP  M
Sbjct: 124 HMEKGFLTMLLAHIAFCTPYVILSVMPKLRGLDPNLAEAAMDLGARPTQAMWKVIVPQIM 183

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL-------AIKEQDLLAIL 242
           PG+V   +++ +  +   + S  +           I + +         +I     L ++
Sbjct: 184 PGIVSGALIAFTMSFDDFIISYFVTGNGVKN----ISTLVWTMSKRINPSINSLSTLIVI 239

Query: 243 YAMLTMLGVIFL 254
              +T+L V  +
Sbjct: 240 MITVTLLIVNIV 251



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 86/244 (35%), Gaps = 16/244 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN----HFTYQDVLYVIWLGCITMFRVVV 392
           ++RV   L + +F       +  ++     + +       +   ++        ++  +V
Sbjct: 7   SRRVILALVMVFFYFPILYMLIFSFNGSRSLTSFDGFSLQWYHKMFNDRNMMEAIYYTLV 66

Query: 393 LIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAFP---ANVFFPLVVSCVSYYHLN 447
             ++A+ +   VG    IG        ++   Q +   P     +   + +         
Sbjct: 67  TAVVATFVSTIVGTITAIGLSKS-RRIVREVVQQINDLPIMNPEIVTAVGLMLFYVSLHM 125

Query: 448 PNLWLSLLMIFGTQ--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +L++L+        Y++ +V+        +  E A        +    +I+P I P 
Sbjct: 126 EKGFLTMLLAHIAFCTPYVILSVMPKLRGLDPNLAEAAMDLGARPTQAMWKVIVPQIMPG 185

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            V+GA+ A   +++  I+S   +   +   +T     +   +++ +     L  LI+   
Sbjct: 186 IVSGALIAFTMSFDDFIISYFVTGNGVKNIST----LVWTMSKRINPSINSLSTLIVIMI 241

Query: 566 VLAL 569
            + L
Sbjct: 242 TVTL 245


>gi|333002843|gb|EGK22399.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri K-272]
 gi|333016847|gb|EGK36171.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri K-227]
          Length = 243

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PILQATLAGLGAIDPSVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPILQATLAGLGAIDPSVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|150401001|ref|YP_001324767.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanococcus aeolicus Nankai-3]
 gi|150013704|gb|ABR56155.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanococcus aeolicus Nankai-3]
          Length = 292

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 80/202 (39%), Gaps = 10/202 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           FV++  I+ ++ +G+   +    I  I     D ++         +  +   +++L+F  
Sbjct: 25  FVILAIIVFLITNGLPTFSTVSPIDFIFGTKWDPYNGLYGIFPMIMGTVLVTLLALVFAV 84

Query: 85  VYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGA 134
                 A             +L P ++I+ +IP + +    +   V +    +      +
Sbjct: 85  PLGVGCAIFLSELAPNWAQKILRPSIEILVAIPSVVYGFVGMVLLVPFIRETFNVNPGFS 144

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LAA   +    +  +T     +L ++PR L+E S +   + WQ    + +P S+ G++ 
Sbjct: 145 WLAASIILAIMIIPTITAISEDALSSVPRALKEGSLALGSTRWQTIKKVLIPASISGIMS 204

Query: 195 NMMMSMSGGWFFVVASEMIVVG 216
            +++ M       +A  M+   
Sbjct: 205 GIILGMGRAIGETMAVLMVAGN 226



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 72/201 (35%), Gaps = 16/201 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I  F +  G+        I +I    T  D    ++     +   V++ ++A +  +
Sbjct: 27  ILAIIVFLITNGLPTFSTVSPIDFIFG--TKWDPYNGLYGIFPMIMGTVLVTLLALVFAV 84

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNP 448
           P+G+                 ++P  ++L A P+ V+         P +    +      
Sbjct: 85  PLGVGCAIFLSELAPNWAQKILRPSIEILVAIPSVVYGFVGMVLLVPFIRETFNVNPGFS 144

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L  S+++       I        S+ P   KE + +   T W+  + +++P      ++
Sbjct: 145 WLAASIILAIMIIPTITAISEDALSSVPRALKEGSLALGSTRWQTIKKVLIPASISGIMS 204

Query: 509 GAITACGGAWNASIVSEVASW 529
           G I   G A   ++   + + 
Sbjct: 205 GIILGMGRAIGETMAVLMVAG 225


>gi|150395349|ref|YP_001325816.1| phosphate ABC transporter inner membrane subunit PstA
           [Sinorhizobium medicae WSM419]
 gi|150026864|gb|ABR58981.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sinorhizobium medicae WSM419]
          Length = 440

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 57/142 (40%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  +V+SL      +      A   RL  ++   ++ + ++P + +    + 
Sbjct: 222 LLGSLYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLA 281

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N + G    A L   F +    +  +  +   +L  +P  +   +     S  Q  +
Sbjct: 282 VFIN-FWGMPRSAALVGAFVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQTVF 340

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P +MPG++   ++ ++  
Sbjct: 341 HHVLPLAMPGILTGTIIGLAHA 362



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + +++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALLGSLYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNPNLWL---SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P       + ++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLAVFINFWGMPRSAALVGAFVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQT 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 VFHHVLPLAMPGILTGTIIGLAHA 362


>gi|218887653|ref|YP_002436974.1| phosphate ABC transporter inner membrane protein PstA
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758607|gb|ACL09506.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 389

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 58/135 (42%), Gaps = 8/135 (5%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           ++I+L  +F    + A          RL  ++   ++ + +IP + +    +  F+N + 
Sbjct: 178 LLITLAISFPVGVMCAVYLEEFAPDNRLTQIIEVNINNLAAIPSILYGLLGLAIFIN-FM 236

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L     +    +  +  S   ++ +IP  + E + +   +  Q  W+  +P S
Sbjct: 237 GVARSSALVGGLTLSLMTLPAIIISTRAAIRSIPPSIREAALALGATPLQVVWHHVLPLS 296

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++   ++ ++  
Sbjct: 297 LPGILTGTIIGLARA 311



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 20/177 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           + +++I   I  PVG+              ++  I+     LAA P+ ++  L ++    
Sbjct: 175 LYVLLITLAISFPVGVMCAVYLEEFAPDNRLTQIIEVNINNLAAIPSILYGLLGLAIFIN 234

Query: 444 Y---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +     +  L   L +   T   I+ +  A   + P   +E A +   T  +   + +LP
Sbjct: 235 FMGVARSSALVGGLTLSLMTLPAIIISTRAAIRSIPPSIREAALALGATPLQVVWHHVLP 294

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
              P  +TG I     A                L   G+ AYI E+ E  +    VL
Sbjct: 295 LSLPGILTGTIIGLARA----------MGETAPLLIVGMMAYIPEAPENFNSAATVL 341


>gi|295692224|ref|YP_003600834.1| phosphate ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295030330|emb|CBL49809.1| Phosphate ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 331

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 16/210 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVD---IVPITLDVHSLPQYASRTTLRM--LSAM 76
           +L  VLV+ II  + +    T V   +     +     D      +     + +      
Sbjct: 60  VLIIVLVVSIIGFVGYHGLATFVSDHVNVFHFLTSTDWDPGEGKNHVGAAVMIVTSFLVT 119

Query: 77  VISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNL 126
           +++ L    +A   A       S++    L  + +++  IP + +    LT  V     L
Sbjct: 120 LLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELLVGIPSVVYGFLGLTIIVPVIRKL 179

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           + G   G  LAA   +F   +  +T     SL  +P    + S +   + WQ  +++ + 
Sbjct: 180 FGGTGFGI-LAATLVLFVMVLPTITSLTVDSLKAVPSHFRKASMALGSTHWQTIYHVVLR 238

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + P ++  ++  M+  +   +A +M++  
Sbjct: 239 VATPRILTAVIFGMARAFGEALAVQMVIGN 268



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 77/236 (32%), Gaps = 25/236 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA------------WQSIGYIVNHF 371
           +   P          +    L I    V+    IG                   ++ +  
Sbjct: 37  KLTKPSKETHQEYWGKGLTYLAIVLIIVLVVSIIGFVGYHGLATFVSDHVNVFHFLTSTD 96

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLL 425
                        + +    ++ ++A+++  P  I I            ++ +Q   +LL
Sbjct: 97  WDPGEGKNHVGAAVMIVTSFLVTLLAALVATPFAIAIALYMTEYSSKKGANFLQSVTELL 156

Query: 426 AAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPND 478
              P+ V+      ++V  +   +      +  + L++F      + +  +    A P+ 
Sbjct: 157 VGIPSVVYGFLGLTIIVPVIRKLFGGTGFGILAATLVLFVMVLPTITSLTVDSLKAVPSH 216

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           F++ + +   T W+   +++L    P  +T  I     A+  ++  ++     + +
Sbjct: 217 FRKASMALGSTHWQTIYHVVLRVATPRILTAVIFGMARAFGEALAVQMVIGNAVLM 272


>gi|27469239|ref|NP_765876.1| ABC transporter permease protein [Staphylococcus epidermidis ATCC
           12228]
 gi|27316788|gb|AAO05963.1|AE016751_258 ABC transporter permease protein [Staphylococcus epidermidis ATCC
           12228]
          Length = 219

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           +LD   L Q    T   +  ++VI  L       L   +R+        L  VL PI++I
Sbjct: 5   SLDSSQLLQALYETLYMVTVSLVIGALIGIPLGILLVVTRKNGIWSNTILHQVLNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  L+  +  ++ G
Sbjct: 123 EAAKAMDASPLQIIRYFLLPEALGSLILAITTAIIG 158



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V V ++I ++I IP+GI +             +   + P   +L 
Sbjct: 7   DSSQLLQALYETLYMVTVSLVIGALIGIPLGILLVVTRKNGIWSNTILHQVLNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY +LP      +    TA  G
Sbjct: 126 KAMDASPLQIIRYFLLPEALGSLILAITTAIIG 158


>gi|332968101|gb|EGK07188.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Desmospora sp. 8437]
          Length = 316

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 9/159 (5%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            S  V++ L +      AA             VL P+++++  IP + +    +   +  
Sbjct: 101 FSVTVLAALISAPLGIGAAVFMTEIAPAWGRKVLQPVIELLVGIPSVVYGFIGLTLLIPY 160

Query: 127 YPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                 G+    LA +  +    +  +T     +L NIPR + E S +   + WQ    +
Sbjct: 161 IRNTHGGSGFSLLAGVIVLSVMILPTITSIAVDTLQNIPRKIREASYALGATRWQTIRRV 220

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  S+PGL+  +++ M+  +   +A +M++     IP 
Sbjct: 221 LIRTSLPGLMTGVVLGMARAFGEALAVQMVIGNSGQIPT 259



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 100/293 (34%), Gaps = 41/293 (13%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-----YIVNHFTYQD 375
           G +     +   +    +R   +L  F   V+  + + + +         +I +  +   
Sbjct: 19  GNLGSRLRQPARKQLRIERRGRLLTWFSATVMMVILLALLFFITSKGISTFIKDGVSLSQ 78

Query: 376 VLYVIWL-------GCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFA 422
                W            +     + ++A++I  P+GI                 +QP  
Sbjct: 79  FFSNQWAPSDGQFGALPFIAGSFSVTVLAALISAPLGIGAAVFMTEIAPAWGRKVLQPVI 138

Query: 423 QLLAAFPANVF----FPLVVSCV--SYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAF 475
           +LL   P+ V+      L++  +  ++     +L   ++++       + ++        
Sbjct: 139 ELLVGIPSVVYGFIGLTLLIPYIRNTHGGSGFSLLAGVIVLSVMILPTITSIAVDTLQNI 198

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P   +E + +   T W+  R +++    P  +TG +     A+  ++  ++   G+    
Sbjct: 199 PRKIREASYALGATRWQTIRRVLIRTSLPGLMTGVVLGMARAFGEALAVQMV-IGNSGQI 257

Query: 536 TTGL---------------GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            TGL               G  +  S    +   + L +L+M  F + + R +
Sbjct: 258 PTGLFDPISTLTSVITLHMGNTVQGSAYNDALWSMALILLLMTLFFIVVIRLI 310


>gi|184155421|ref|YP_001843761.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260662066|ref|ZP_05862962.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226765|dbj|BAG27281.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260553449|gb|EEX26341.1| glycine/betaine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 209

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 85/207 (41%), Gaps = 16/207 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +  ++    ++    +L++++I+LL   +   L  +  RL   L  +  ++ S+P   F 
Sbjct: 8   NATTILTDTAQHAQLVLTSLLIALLIATLLILLCLRHDRLLTGLTYVFSLLYSVPSFAF- 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                 F  L P   +G   A +  +  S+   +  +    L  I   L EV+    ++ 
Sbjct: 67  ------FALLLPLTGLGDTTATVVLVVYSEYV-LLRTFITGLRAIDPSLVEVAYGMGMTS 119

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q F+ + +P + P +   + ++++        +  I  G       G+G+ +   ++ Q
Sbjct: 120 RQVFFKVQLPLATPAIFSGLQVALASTMSIATIAATINAG-------GLGNLLFEGLQTQ 172

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPM 263
            L  +L+ ++ M   + L    + R +
Sbjct: 173 QLPPLLWGII-MTVALTLVSIAILRIL 198



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 12/176 (6%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               + + +     LL + P+  FF L++              +++++  +++ +L   I
Sbjct: 43  RHDRLLTGLTYVFSLLYSVPSFAFFALLLPLTGLGDTT----ATVVLVVYSEYVLLRTFI 98

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  A      EVA    +T  + +  + LP   P   +G   A     + + ++   + 
Sbjct: 99  TGLRAIDPSLVEVAYGMGMTSRQVFFKVQLPLATPAIFSGLQVALASTMSIATIAATINA 158

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G       GLG  + E  +    P ++ G++ M   +  ++  +   L  +     
Sbjct: 159 G-------GLGNLLFEGLQTQQLPPLLWGII-MTVALTLVSIAILRILQHFLRPRF 206


>gi|332708482|ref|ZP_08428457.1| molybdate ABC transporter, permease protein [Lyngbya majuscula 3L]
 gi|332352746|gb|EGJ32311.1| molybdate ABC transporter, permease protein [Lyngbya majuscula 3L]
          Length = 727

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 21/201 (10%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG---- 129
            A +++       A      +  G     I+D + ++PI+  L  TVV F+ L       
Sbjct: 16  LATILAFFLGITVAGWMFSYQGKGKG---IIDSILTLPIV--LPPTVVGFLLLLLLGRNS 70

Query: 130 -----------KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                       VI +  A + A        M  ++  +   + +DL   +R+   S  +
Sbjct: 71  PVGQLLRQLGISVILSWPATVIAATVVAFPLMYKTVLAAFKQVNQDLINCARTLGASECR 130

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW + +P + PG++   +++ +       A+ M+  G        I   I  A +   +
Sbjct: 131 VFWQVLLPLAWPGVMAGTVLAFARALGEFGATLMLA-GSIPGRTQTIAIAIFFAAQAGRM 189

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L  +L M+ +  +   ++
Sbjct: 190 GEALLWVLIMVAIALVAITII 210



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 38/241 (15%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E+   L  + + + +  I  F +   VA  +           F+YQ     I    +T+ 
Sbjct: 2   EDLSPLWISLKTAGLATILAFFLGITVAGWM-----------FSYQGKGKGIIDSILTLP 50

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V    +  +++   + + +G          P  QLL          L +S +       
Sbjct: 51  IV----LPPTVVGFLLLLLLGRN-------SPVGQLLRQ--------LGISVIL------ 85

Query: 449 NLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           +   +++      + +++  +  A      D    A +   +  R +  ++LP  +P  +
Sbjct: 86  SWPATVIAATVVAFPLMYKTVLAAFKQVNQDLINCARTLGASECRVFWQVLLPLAWPGVM 145

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G + A   A      + + + G I  RT  +   I  + + G   E +L VLIM    L
Sbjct: 146 AGTVLAFARALGEFGATLMLA-GSIPGRTQTIAIAIFFAAQAGRMGEALLWVLIMVAIAL 204

Query: 568 A 568
            
Sbjct: 205 V 205


>gi|291287536|ref|YP_003504352.1| phosphate ABC transporter, inner membrane subunit PstA
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290884696|gb|ADD68396.1| phosphate ABC transporter, inner membrane subunit PstA
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 387

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +++++LF+     + A               +   ++ + +IP + F    +  F+N + 
Sbjct: 176 LLLTMLFSVPVGVMTAIYLEEFAPDNWFTRTIEVNINNLAAIPSIIFGLLGLAIFINFF- 234

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + LA    +    +  +  S   +L ++P ++ + ++    SGWQ  W+  +P S
Sbjct: 235 GVPRSSALAGGLTLALMTLPVIIISTRAALRSVPDNIRQGAQGVGASGWQVVWHHVLPLS 294

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++   ++ ++  
Sbjct: 295 LPGILTGSIIGLAQA 309



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 10/158 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           V ++++  +  +PVG+               +  I+     LAA P+ +F  L ++    
Sbjct: 173 VYVLLLTMLFSVPVGVMTAIYLEEFAPDNWFTRTIEVNINNLAAIPSIIFGLLGLAIFIN 232

Query: 444 YHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   L +   T   I+ +  A   + P++ ++ A     +GW+   + +LP
Sbjct: 233 FFGVPRSSALAGGLTLALMTLPVIIISTRAALRSVPDNIRQGAQGVGASGWQVVWHHVLP 292

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
              P  +TG+I     A   +    +           G
Sbjct: 293 LSLPGILTGSIIGLAQAMGETAPLLIIGMLAYIPEAPG 330


>gi|73748092|ref|YP_307331.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|147668880|ref|YP_001213698.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dehalococcoides sp. BAV1]
 gi|289432118|ref|YP_003461991.1| phosphate ABC transporter inner membrane protein [Dehalococcoides
           sp. GT]
 gi|73659808|emb|CAI82415.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|146269828|gb|ABQ16820.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Dehalococcoides sp. BAV1]
 gi|288945838|gb|ADC73535.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dehalococcoides sp. GT]
          Length = 286

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 83/212 (39%), Gaps = 12/212 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI--- 78
           + A V ++ ++ I +  I+        V+ +         P Y     L M+   ++   
Sbjct: 17  ITALVSILVLLAIAIFIIKGGLPLFGEVNPLDFLFGQSWSPTYGEYGILSMIVGSLLVTL 76

Query: 79  -SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--LTFTVVYFMNLYPG 129
            +++         A        RR+  +L P ++++  IP + +  +   V+       G
Sbjct: 77  GAMVIAVPLGIACAILLAEVAPRRVRDLLRPAVELLVGIPSVVYGLVGIMVIVPAVRNLG 136

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
               + LAA+  +    +  +      SL  +PR   E S +   S WQ  W++ +P + 
Sbjct: 137 GTGYSILAAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLLPAAR 196

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            G+  ++++ M       +A  M++    +IP
Sbjct: 197 SGVGASIVLGMGRAIGETMAMIMVIGNAVIIP 228



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 74/207 (35%), Gaps = 14/207 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I  F +  G+ +      + ++              L  I     +++ + A +I +
Sbjct: 26  LLAIAIFIIKGGLPLFGEVNPLDFLFGQSWSPTYGEYGILSMI--VGSLLVTLGAMVIAV 83

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-----YYHLNPNLW 451
           P+GI             +   ++P  +LL   P+ V+  + +  +            ++ 
Sbjct: 84  PLGIACAILLAEVAPRRVRDLLRPAVELLVGIPSVVYGLVGIMVIVPAVRNLGGTGYSIL 143

Query: 452 LSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            ++L++       + ++      A P  ++E + +   + W+   +++LP          
Sbjct: 144 AAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLLPAARSGVGASI 203

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTT 537
           +   G A   ++   +     + + ++
Sbjct: 204 VLGMGRAIGETMAMIMVIGNAVIIPSS 230


>gi|312194001|ref|YP_004014062.1| ABC transporter permease [Frankia sp. EuI1c]
 gi|311225337|gb|ADP78192.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EuI1c]
          Length = 279

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 20/155 (12%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--------------YYHLNP 448
           P+G+ +G        I   A  + A PA     L+   VS                    
Sbjct: 58  PIGLLVGHTGRGGFAIAGLANAIRAVPAFGLLILLYVVVSPKIHYHGSISWLVPRGAFGS 117

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + +  +++      IL N  AG      D ++ A    + GW+    + LP   P  + 
Sbjct: 118 LIPVEAMLVVLAIPPILTNTYAGVQGVDPDVRDAARGMGMRGWQVVTRVELPIALPLVLA 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           G  +A         V   A+         GLG  I
Sbjct: 178 GVRSA------VLQVIATATIAGYLPFLGGLGYQI 206



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 66/182 (36%), Gaps = 16/182 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
            H L        L  + A+V++++       L   + R G  +  + + ++++P  G L 
Sbjct: 31  PHGLLVSLREHVLYTVVAVVVAMIIAVPIGLLVGHTGRGGFAIAGLANAIRAVPAFGLLI 90

Query: 118 FTVVYFMN----------LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
              V              L P    G+ +     +    +  +  + Y  +  +  D+ +
Sbjct: 91  LLYVVVSPKIHYHGSISWLVPRGAFGSLIPVEAMLVVLAIPPILTNTYAGVQGVDPDVRD 150

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +R   + GWQ    + +P ++P ++  +  ++      +       +   +  L G+G 
Sbjct: 151 AARGMGMRGWQVVTRVELPIALPLVLAGVRSAV------LQVIATATIAGYLPFLGGLGY 204

Query: 228 YI 229
            I
Sbjct: 205 QI 206


>gi|288962430|ref|YP_003452725.1| D-methionine transport system permease protein [Azospirillum sp.
           B510]
 gi|288914696|dbj|BAI76181.1| D-methionine transport system permease protein [Azospirillum sp.
           B510]
          Length = 228

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 10/147 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T   +  + +I  L       + A + R           V+  ++++ +S P 
Sbjct: 16  LIKGLVDTLHMVAVSGLIGTLIGLPIGVMLAVTGRGELLQNFAFNKVMGAVVNMTRSTP- 74

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  +    +   +  ++  + R L E +++ 
Sbjct: 75  FIILVVAIIPFTRLIAGTSIGTN-AAIVPLTVAAAPFIARVVENAVREVDRGLVEAAQAM 133

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             + +Q    + +P ++PG+V  + +S
Sbjct: 134 GATPFQIIRKVLLPEALPGIVAGLTLS 160



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 14/156 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFA 422
            + Q +  +I     T+  V V  +I ++I +P+G+ +              +  +    
Sbjct: 8   LSPQIIDLLIKGLVDTLHMVAVSGLIGTLIGLPIGVMLAVTGRGELLQNFAFNKVMGAVV 67

Query: 423 QLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            +  + P         P     ++   +  N  +  L +    + I   V          
Sbjct: 68  NMTRSTPFIILVVAIIPF-TRLIAGTSIGTNAAIVPLTVAAAPF-IARVVENAVREVDRG 125

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             E A +   T ++  R ++LP   P  V G   + 
Sbjct: 126 LVEAAQAMGATPFQIIRKVLLPEALPGIVAGLTLSA 161


>gi|260663085|ref|ZP_05863978.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
 gi|260552706|gb|EEX25706.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
          Length = 299

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 19/211 (9%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFM 124
              M   + + L      A           V  P+++++  IP + +    LT  +    
Sbjct: 86  VTMMAGVVALPLSLMVALAVTEILPATFRKVTQPVIELLVGIPSVVYGFVGLTVIIPVLR 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             + G   G  LAA   +F   V  M      +L  +P      SR    + WQ  +   
Sbjct: 146 QWFGGTGFGM-LAATVVLFLMIVPTMVSMTIDTLLAVPESYRMASRGLGATRWQTIYRTI 204

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP--------------GIGSYIA 230
           +P +  G++  M+  M+  +   +A +M++   +++P                GIG+ + 
Sbjct: 205 LPSATGGVLTAMIFGMARAFGEALAVQMVIGNASIMPTSLMSSAATLTSVLTTGIGNTVM 264

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                  L ++   +L M     L  +L+ R
Sbjct: 265 GTAANDALWSLALVLLVMSLFFNLAMRLVNR 295



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 29/208 (13%)

Query: 394 IIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            ++A ++ +P+ + +                QP  +LL   P+ V+         P++  
Sbjct: 87  TMMAGVVALPLSLMVALAVTEILPATFRKVTQPVIELLVGIPSVVYGFVGLTVIIPVLRQ 146

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                     L  ++++       ++   I    A P  ++  +     T W+     IL
Sbjct: 147 WFGGTGFG-MLAATVVLFLMIVPTMVSMTIDTLLAVPESYRMASRGLGATRWQTIYRTIL 205

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGH--------------IHLRTTGLGAYIAE 545
           P      +T  I     A+  ++  ++                     + TTG+G  +  
Sbjct: 206 PSATGGVLTAMIFGMARAFGEALAVQMVIGNASIMPTSLMSSAATLTSVLTTGIGNTVMG 265

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +    +   + L +L+M  F     R +
Sbjct: 266 TAANDALWSLALVLLVMSLFFNLAMRLV 293


>gi|238922326|ref|YP_002935840.1| spermidine/putrescine transport system permease protein
           [Eubacterium eligens ATCC 27750]
 gi|238873998|gb|ACR73706.1| spermidine/putrescine transport system permease protein
           [Eubacterium eligens ATCC 27750]
          Length = 261

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 18/252 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            SR+     + L   + V   ++ ++ +          +V++     D ++L      + 
Sbjct: 3   FSRKYLGIPYGLFLILFVAAPLLVLVYYAFTNGQGQFSMVNLQNFFTDPNTL-GTLCYSL 61

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +    A  + L+  +  A + ++S+     ++ +L +M       ++ FT+         
Sbjct: 62  VLAFVATAVCLIIAYPVAYILSQSKLKRKAVILLLFVM-----PMWINFTLRITALKEIL 116

Query: 130 KVIGAELA------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +I   LA       I  +    +  M   +Y +L  + + + E +       +Q F  +
Sbjct: 117 SMIEGNLAYYPFINTIIGMTYDFLPFMILPLYTTLSKLDKSVIEAASDLGADNFQTFIKV 176

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+PG+V  + M         V  +M+     ++     GS I       D      
Sbjct: 177 ILPLSVPGIVSGVSMVFLPAMTNYVVLDMLYNSTYIM-----GSLIGSYFSAYDWHNGSM 231

Query: 244 AMLTMLGVIFLY 255
             L +L +I + 
Sbjct: 232 IALILLVIICIV 243



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 31/207 (14%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +   C ++    V   +  II  PV   +         +             +   ++  
Sbjct: 54  LGTLCYSLVLAFVATAVCLIIAYPVAYILSQSKLKRKAV------------ILLLFVMPM 101

Query: 440 CVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGA----------------SAFPNDFKEV 482
            +++      L   L MI G   +Y   N I G                 S       E 
Sbjct: 102 WINFTLRITALKEILSMIEGNLAYYPFINTIIGMTYDFLPFMILPLYTTLSKLDKSVIEA 161

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           AS      ++ +  +ILP   P  V+G       A    +V ++  +   ++  + +G+Y
Sbjct: 162 ASDLGADNFQTFIKVILPLSVPGIVSGVSMVFLPAMTNYVVLDML-YNSTYIMGSLIGSY 220

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
            + + +  +   + L +L++ C V  +
Sbjct: 221 FS-AYDWHNGSMIALILLVIICIVTLV 246


>gi|146277505|ref|YP_001167664.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555746|gb|ABP70359.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 283

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + D +     G +T        +I     +   I I   P +   + P    +AA P
Sbjct: 77  PVLWGDFVQTFVKGALT------GWLIGCGAAVLTAIAIDRSPFLQRGLLPVGNFVAALP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F        N +AG +A     +++  ++  +
Sbjct: 131 IVGIAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNTVAGLAATEAMQRDLMKTYSAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + LP   P+   G   A   A   +IV+E            G+G  I+    +
Sbjct: 187 YAQTLLKLRLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTEVGR 241

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
                V   + +      A 
Sbjct: 242 LGLDMVWAEITVAALAGSAF 261



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 89/246 (36%), Gaps = 22/246 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLH-------GIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           R        L    + G+  +++         +    +P        I+  +  L     
Sbjct: 25  RFSETRAGRLVVPAIFGLTVLVVWELMVRGLQVSPIILPPPTAIGARISTSLPVLWGDFV 84

Query: 67  RTTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +T ++  L+  +I      + A    +S  L   L+P+ + + ++PI+G     V++F  
Sbjct: 85  QTFVKGALTGWLIGCGAAVLTAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPILVMWFGF 144

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +  K     +   F +          +    L        ++ +++  S  Q    L +
Sbjct: 145 DWQSKAAVVVVMVFFPV--------LVNTVAGLAATEAMQRDLMKTYSASYAQTLLKLRL 196

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P +MP +   + ++ +      + +E         P+ G+G  I+  +    L  +++A 
Sbjct: 197 PAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISTEVGRLGLD-MVWAE 250

Query: 246 LTMLGV 251
           +T+  +
Sbjct: 251 ITVAAL 256


>gi|119387609|ref|YP_918643.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119378184|gb|ABL72947.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 240

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIP 111
           IT+    +     +    + S+   ++L         ++    R    ++ + +I  +IP
Sbjct: 32  ITIYWDDITYLTRQHVFLVASSGGAAILVGVPVGIWLSRPSMERYAETVMQVFNIGTTIP 91

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            L  +  ++      +P         A F +F + +  +  + Y  L  +P  L+E +  
Sbjct: 92  TLAVIALSMTLLGIGFPP--------AFFGLFVASLLPIVRNTYAGLLAVPSHLKEAATG 143

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             ++  Q    + +P ++  +   +  +++ 
Sbjct: 144 MGMTQRQILMRVEIPNALYVIFSGIRTALAI 174



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 9/180 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++  L +     +  V +   W +   +++  T      + +L    +F V      A +
Sbjct: 1   MTRWLGLGRGATMLLVFLLGIWVATSGLLDQITI-YWDDITYLTRQHVFLVASSGGAAIL 59

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           + +PVGIW+  RP +    +   Q+       P      L ++ +              +
Sbjct: 60  VGVPVGIWL-SRPSMERYAETVMQVFNIGTTIPTLAVIALSMTLLGIGF----PPAFFGL 114

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              +   I+ N  AG  A P+  KE A+   +T  +    + +P       +G  TA   
Sbjct: 115 FVASLLPIVRNTYAGLLAVPSHLKEAATGMGMTQRQILMRVEIPNALYVIFSGIRTALAI 174


>gi|291527578|emb|CBK93164.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Eubacterium rectale M104/1]
          Length = 287

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQD--VLYVIWLGCITMFRVVVLIIIASIIWIPV 404
               ++ G+ I +  + IG +   F   +  VL         +   + +III  +I  PV
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFLTSETSVLRGTVGIAGNLLNTLYIIIITMLIATPV 85

Query: 405 GIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLL 455
           G+              + S I+   + LA  P+ +F    +             L  SL 
Sbjct: 86  GVGAAVYLNEYAKPGKLVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGYSILTGSLT 145

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I  N        P+ ++  A       W   R I+LP   P  +TG I A G
Sbjct: 146 LTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVILAIG 205

Query: 516 GAWN--ASIVSEVASWGHIHLRTTGLGAYIAE------------STEKGSFPEVVLGVLI 561
                 A+++    S G +    +G  + I +            +T +G F +     ++
Sbjct: 206 RIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLAATSEGKFDQAFGIAVV 265

Query: 562 MCCFVLALNRF 572
           +   V  +N  
Sbjct: 266 LLVIVFLINIL 276



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 21/254 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L+ VL+ GII  +          + +     +      +      T   ++  M+I+   
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFLTSETSVLRGTVGIAGNLLNTLYIIIITMLIATPV 85

Query: 83  TFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A    +  + G ++  I    + +  IP + F  F +++F          + L   
Sbjct: 86  GVGAAVYLNEYAKPGKLVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGY--SILTGS 143

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P      +       W     + +P +MPG++  ++++
Sbjct: 144 LTLTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVILA 203

Query: 200 MS---------------GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +                 G    VAS              I  Y+A A  E         
Sbjct: 204 IGRIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLA-ATSEGKFDQAFGI 262

Query: 245 MLTMLGVIFLYDQL 258
            + +L ++FL + L
Sbjct: 263 AVVLLVIVFLINIL 276


>gi|75906468|ref|YP_320764.1| molybdate ABC transporter permease [Anabaena variabilis ATCC 29413]
 gi|75700193|gb|ABA19869.1| Molybdate ABC transporter, permease protein [Anabaena variabilis
           ATCC 29413]
          Length = 601

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 28/215 (13%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA------AKSRRLGMVLVPILD 105
           +P+ L    +      +    L A  I+       A          KS   G+ + P++ 
Sbjct: 1   MPLDLSPLWI------SLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGIFVAPLI- 53

Query: 106 IMQSIPILGFLTFTVVYFMNLYP-GKVIGAELAAIFAIFTSQV-------WNMTFSMYQS 157
               +P        +++F    P GK++G    +I   +           + + +     
Sbjct: 54  ----LPPTVVGFLLLLFFGKNGPMGKLMGLFDFSIVFTWYGAAIAATIVSFPLMYKTSLG 109

Query: 158 -LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
               I  +L  V+R+   S    FW + +P + PG+V   M+S +       A+ M+  G
Sbjct: 110 AFAQIDGNLLRVARTLGASESTIFWRISLPLAFPGIVAATMLSFARALGEFGATLMLA-G 168

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLG 250
           +       I   I  A++         +A++ M+ 
Sbjct: 169 NIPGQTQTIPMAIYFAVEAGATNEAWFWAIMIMVI 203



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 64/198 (32%), Gaps = 17/198 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF--PANVFFPLVVSCVS 442
           I++   ++   I   + I    W+         +      +A    P  V   L++    
Sbjct: 10  ISLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGI-FVAPLILPPTVVGFLLLLFFG 68

Query: 443 Y------------YHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHIT 489
                        + +    + + +      + +++    GA +    +   VA +   +
Sbjct: 69  KNGPMGKLMGLFDFSIVFTWYGAAIAATIVSFPLMYKTSLGAFAQIDGNLLRVARTLGAS 128

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +  I LP  FP  V   + +   A      + + + G+I  +T  +   I  + E 
Sbjct: 129 ESTIFWRISLPLAFPGIVAATMLSFARALGEFGATLMLA-GNIPGQTQTIPMAIYFAVEA 187

Query: 550 GSFPEVVLGVLIMCCFVL 567
           G+  E     +++    L
Sbjct: 188 GATNEAWFWAIMIMVISL 205


>gi|315503416|ref|YP_004082303.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
 gi|315410035|gb|ADU08152.1| binding-protein-dependent transport systems inner membrane
           component [Micromonospora sp. L5]
          Length = 240

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 8/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +             A+++  L  +        S R G +++ + ++  +IP L  
Sbjct: 18  TNPGGVLDRLGEHLSMSALAVLLGCLVAWPIGLWLGHSGRGGGLVLLVSNVTLAIPTLAL 77

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + +  +     +  + +R   LS
Sbjct: 78  LTILPLTFLGFGRPAVVVALAVFAVP-------PLLANAFTGVRQADPEARDAARGMGLS 130

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-TVIPLPGIGSYIALAIK 234
           G Q    + +P ++P L      +          +  +  G    I   G G  IA    
Sbjct: 131 GGQVLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQIIRAGFGLDIAAGGG 190

Query: 235 EQDLLAILYAMLTMLGVIFL 254
           +     +L A L +L    L
Sbjct: 191 QIIAGGVLVAGLALLVEGVL 210



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 10/182 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ ++ +   + +   V+      +    + +++  ++  P+G+W+G        +   
Sbjct: 6   QAVVWLNDPLNWTNPGGVLDRLGEHLSMSALAVLLGCLVAWPIGLWLGHSGRGGGLVLLV 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      ++      +     +    +        +L N   G      + ++
Sbjct: 66  SNVTLAIPTLALLTILPLTFLGFGRPAVVVALAVFAVP---PLLANAFTGVRQADPEARD 122

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++G +  R + LP   PY   G  TA       + ++   + G       GLG 
Sbjct: 123 AARGMGLSGGQVLRRVELPLAVPYLAAGFRTAAVQVVATAALASFVNGG-------GLGQ 175

Query: 542 YI 543
            I
Sbjct: 176 II 177


>gi|312887132|ref|ZP_07746736.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311300444|gb|EFQ77509.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 296

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 19/213 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTF 118
           L   +  T   M  A+ + +      +  A   R+L  VL P ++++ S+P   +GFL  
Sbjct: 72  LVSTSLVTLGAMCIAIPLGIGTASFLSDYAG--RKLKSVLKPAIEMLASVPSVAIGFLGI 129

Query: 119 TVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            V+     ++         L     +    +  +      +L  +P   +E S S   + 
Sbjct: 130 VVLGPGIASITGQSNGLNALNGAVLLAIMSLPTIITVTQDALEGVPNAYKEASYSVGANR 189

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY----IALA 232
           WQ    + +P + PG++  +M+ +       +   M     +  P    G +       A
Sbjct: 190 WQTLIQVTIPAAAPGILAAVMLGVGRAIGETMTVLMATGNASAFPK---GFFHSVRTMTA 246

Query: 233 IKEQDLLAI------LYAMLTMLGVIFLYDQLL 259
               ++  +       YA+  +  V+FL   L+
Sbjct: 247 TIAIEMGEVPYQTTHYYALFAIAAVLFLMTLLV 279



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 14/204 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  IF+  +   +A  +  +   +I             +     +    ++ + A  
Sbjct: 25  IAILAGIFFMLLWNTIAFFLKVKPWDFITGTQWSPSGTPANYGMLPLLVSTSLVTLGAMC 84

Query: 400 IWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYH 445
           I IP+GI             + S ++P  ++LA+ P+            P + S     +
Sbjct: 85  IAIPLGIGTASFLSDYAGRKLKSVLKPAIEMLASVPSVAIGFLGIVVLGPGIASITGQSN 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  ++L+   +   I+          PN +KE + S     W+    + +P   P 
Sbjct: 145 GLNALNGAVLLAIMSLPTIITVTQDALEGVPNAYKEASYSVGANRWQTLIQVTIPAAAPG 204

Query: 506 YVTGAITACGGAWNASIVSEVASW 529
            +   +   G A   ++   +A+ 
Sbjct: 205 ILAAVMLGVGRAIGETMTVLMATG 228


>gi|258646365|ref|ZP_05733834.1| iron(III)-transport system permease protein SfuB [Dialister invisus
           DSM 15470]
 gi|260403766|gb|EEW97313.1| iron(III)-transport system permease protein SfuB [Dialister invisus
           DSM 15470]
          Length = 550

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 79/532 (14%), Positives = 159/532 (29%), Gaps = 80/532 (15%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +    + + ++S       A L    +  G   + IL ++  +           
Sbjct: 58  WGTMVNSLKVTVVSTILSAALGLPLAYLMRSVKIKGSSFLNILIVISYLSPP--FIGAYA 115

Query: 122 YFMNLYPGKVIGAEL--------------AAIFAIFTSQVWNMT-FSMYQSLCNIPRDLE 166
           +   L    VI   L              A I  +FT Q + +    +  +L N+   L 
Sbjct: 116 WIQMLGRQGVITQFLNDTFGLHYGGVYGFAGIVLVFTLQSFPLVYIYVSGALKNLDNSLN 175

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E + S   S   + W + VP  MP L+ + M+     +       +I  G   +P+    
Sbjct: 176 EAAESLGCSRMGRIWKIIVPLVMPTLLASSMLVFMRVFADFGTPMLIGEGYKTLPVLIYN 235

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL 286
            ++     +    A +  ++  L ++  + Q                             
Sbjct: 236 QFMGEVSGDDGFAAAICCIVIGLTIVMFFVQRFL-------------------------- 269

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
              R T  +  +   +      L N +  L   + V     P+  +   S    +     
Sbjct: 270 -AGRNTYAMTALKPMAAESLGGLRNILAHLAVYMVVGLAILPQFVVVYTSFLATNGG--- 325

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
                      G A QS    +       + +  +LG   +  V+V           +G+
Sbjct: 326 ------QVFTGGFALQSYDATLFAKDNDVIWHTYFLGLCAIAAVLV-----------LGV 368

Query: 407 WIG-FRPHISSKIQPFAQLLAAFPANVFFP---LVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            I        + +     ++  FP     P   L ++ V  ++ +P +     +I    +
Sbjct: 369 LIAYLSVRKRNTLNSILDVMTMFP--FIIPGSVLGIAFVFAFNKSPIILTGTALIMIISF 426

Query: 463 ------YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                 Y + +  A         +E A S   +    +R I +P + P  ++GAI +   
Sbjct: 427 AVRRMPYTVRSSTAILGNISPSIEEAAISLGASDMTTFRKITVPMMMPGVLSGAIMS--- 483

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            W   I    +S       T  L   I     +G++        I+    + 
Sbjct: 484 -WVTIISELSSSIILYTNSTQTLTVSIYTEVIRGNYGNASAYATILTVTSIL 534


>gi|212716800|ref|ZP_03324928.1| hypothetical protein BIFCAT_01739 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660275|gb|EEB20850.1| hypothetical protein BIFCAT_01739 [Bifidobacterium catenulatum DSM
           16992]
          Length = 283

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 2/172 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     IV  FTYQD ++  WL   T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGHTFALWDNIVTVFTYQDGIFGRWL-LNTLLYVVVGAGGATLLAIMGGYAL 151

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLSLTNTPWAMIIPSLISPFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            I    A P +  E A     + +R +  + LP + P  VT A+      WN
Sbjct: 212 WIFSEQAVPTELLEAARVDGASEFRTFFQVSLPLLAPGIVTTALFTIVATWN 263



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWLLNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R    S ++ F+
Sbjct: 184 LFAKLSLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFF 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QVSLPLLAPGIVTTALFTIVATWN 263


>gi|57238189|ref|YP_178730.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni RM1221]
 gi|57166993|gb|AAW35772.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni RM1221]
 gi|315058029|gb|ADT72358.1| Phosphate transport system permease protein PstA [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 362

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAGA 283


>gi|51893767|ref|YP_076458.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51857456|dbj|BAD41614.1| glycine betaine/carnitine/choline ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 204

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 19/208 (9%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           +    L           LSA+++++L       L ++ RRL   ++  L + Q++P +  
Sbjct: 2   ITWAKLASLTLEHLRLSLSAVLLAVLVAVPAGILLSRIRRLADPVMVALGLFQTLPAIAL 61

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           L F +                 A+ A+F   +  +  + Y+ L  +   ++E +R   ++
Sbjct: 62  LAFMIPLMGIG--------TKPALTALFLYALLPILSNTYKGLTGVDPAVKEAARGMGMT 113

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
             Q    + +P +   ++  +  S  +  GW  +            +   G+G  I    
Sbjct: 114 ALQMLLSVELPLAFRVIMSGVRTSTVLIIGWATL---------GAYVGAGGLGEPIVSGF 164

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                  IL   + +  +  L D LL R
Sbjct: 165 ATVSPRLILAGGVPVTLMALLADFLLGR 192



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 11/173 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P GI +     ++  +     L    PA      ++  +          L L  +     
Sbjct: 31  PAGILLSRIRRLADPVMVALGLFQTLPAIALLAFMIPLMGIGTKPALTALFLYALL---- 86

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL N   G +      KE A    +T  +    + LP  F   ++G  T+       + 
Sbjct: 87  PILSNTYKGLTGVDPAVKEAARGMGMTALQMLLSVELPLAFRVIMSGVRTSTVLIIGWAT 146

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +      G       GLG  I       S   ++ G + +    L  +  L  
Sbjct: 147 LGAYVGAG-------GLGEPIVSGFATVSPRLILAGGVPVTLMALLADFLLGR 192


>gi|294787335|ref|ZP_06752588.1| putative ABC-type sugar transport system, permease component
           [Parascardovia denticolens F0305]
 gi|315227105|ref|ZP_07868892.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Parascardovia denticolens DSM 10105]
 gi|294484691|gb|EFG32326.1| putative ABC-type sugar transport system, permease component
           [Parascardovia denticolens F0305]
 gi|315119555|gb|EFT82688.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Parascardovia denticolens DSM 10105]
          Length = 342

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 3/207 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G ++     IV  FTYQ  ++  WL   T+  VV+    A+++ I  G  +
Sbjct: 99  FVSTFGLGFGHSFAIWDNIVTTFTYQGGIFSRWL-LNTLLYVVIGAGGATLLAIMGGYAL 157

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            S   +    W  ++    + + +   
Sbjct: 158 AKFRFPGRKAVFAVIIGSISVPGIALAVPQFLLFSKIGITDTPWAMIIPSLISPFGLYLM 217

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     +  R +  I LP + P  VT A+      W N  +   +
Sbjct: 218 WIFSEQAVPTELLEAARVDGASEMRTFFTIALPLLSPGIVTTALFTIVATWNNYFLPLIM 277

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFP 553
                 +  T GL  +  ++   G+ P
Sbjct: 278 LKDSQWYPLTIGLNQWNKQANTAGAQP 304



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 130 RWLLNTLLYVVIGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGSISVPGIALAVPQFL 189

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           A+        + +      S   +P +L E +R    S  + F+
Sbjct: 190 LFSKIGITDTP----WAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGASEMRTFF 245

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 246 TIALPLLSPGIVTTALFTIVATWN 269


>gi|146307391|ref|YP_001187856.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145575592|gb|ABP85124.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 217

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILD 105
           ++L +  L Q    T L +  + +++LL     A     S         RL  VL  I++
Sbjct: 1   MSLLLDRLWQGLLDTLLMVGVSSLLALLAGIPLAVFLVTSSKGGIFEAPRLNQVLGAIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +SIP L  +   ++ F  L  G   G   AA+  +  +           SL  +   L
Sbjct: 61  LFRSIPFLILM-VALIPFTRLIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGL 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E +++     W   W++ +P ++PG+V    +++
Sbjct: 119 IEAAQAMGCRRWHIVWHVLLPEALPGIVGGFTITL 153



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 13/208 (6%)

Query: 376 VLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLA 426
           +L  +W G + T+  V V  ++A +  IP+ +++           P ++  +     L  
Sbjct: 4   LLDRLWQGLLDTLLMVGVSSLLALLAGIPLAVFLVTSSKGGIFEAPRLNQVLGAIVNLFR 63

Query: 427 AFPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVAS 484
           + P  +    L+            +W +++ +          +         +   E A 
Sbjct: 64  SIPFLILMVALIPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQ 123

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +     W    +++LP   P  V G         N+S ++     G +       G    
Sbjct: 124 AMGCRRWHIVWHVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDLAYRYGYQRF 183

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +S    +   +V  V+++     + +R 
Sbjct: 184 DSQVMLTV--IVALVVLVSLIQFSGDRL 209


>gi|15559068|gb|AAL02108.1|AF408411_3 molybdenum transport protein [Anabaena variabilis ATCC 29413]
          Length = 599

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 28/215 (13%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA------AKSRRLGMVLVPILD 105
           +P+ L    +      +    L A  I+       A          KS   G+ + P++ 
Sbjct: 1   MPLDLSPLWI------SLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGIFVAPLI- 53

Query: 106 IMQSIPILGFLTFTVVYFMNLYP-GKVIGAELAAIFAIFTSQV-------WNMTFSMYQS 157
               +P        +++F    P GK++G    +I   +           + + +     
Sbjct: 54  ----LPPTVVGFLLLLFFGKNGPMGKLMGLFDFSIVFTWYGAAIAATIVSFPLMYKTSLG 109

Query: 158 -LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
               I  +L  V+R+   S    FW + +P + PG+V   M+S +       A+ M+  G
Sbjct: 110 AFAQIDGNLLRVARTLGASESTIFWRISLPLAFPGIVAATMLSFARALGEFGATLMLA-G 168

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLG 250
           +       I   I  A++         +A++ M+ 
Sbjct: 169 NIPGQTQTIPMAIYFAVEAGATNEAWFWAIMIMVI 203



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 64/198 (32%), Gaps = 17/198 (8%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF--PANVFFPLVVSCVS 442
           I++   ++   I   + I    W+         +      +A    P  V   L++    
Sbjct: 10  ISLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGI-FVAPLILPPTVVGFLLLLFFG 68

Query: 443 Y------------YHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHIT 489
                        + +    + + +      + +++    GA +    +   VA +   +
Sbjct: 69  KNGPMGKLMGLFDFSIVFTWYGAAIAATIVSFPLMYKTSLGAFAQIDGNLLRVARTLGAS 128

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +  I LP  FP  V   + +   A      + + + G+I  +T  +   I  + E 
Sbjct: 129 ESTIFWRISLPLAFPGIVAATMLSFARALGEFGATLMLA-GNIPGQTQTIPMAIYFAVEA 187

Query: 550 GSFPEVVLGVLIMCCFVL 567
           G+  E     +++    L
Sbjct: 188 GATNEAWFWAIMIMVISL 205


>gi|240103285|ref|YP_002959594.1| ABC transporter, permease protein [Thermococcus gammatolerans EJ3]
 gi|239910839|gb|ACS33730.1| ABC transporter, permease protein [Thermococcus gammatolerans EJ3]
          Length = 267

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 91/260 (35%), Gaps = 19/260 (7%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFTYQDVLYVIWLG 383
           P     L     +   L +F F V   + +   + ++       +  +    +  ++   
Sbjct: 14  PREPRHLLQGLSMRGWLYLFLFAVASWLVLSHLYPALIPTPAETLAFYREVGLSLILSSL 73

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T++      ++AS++     +   +       +      L +    V+  + +     
Sbjct: 74  LLTLYHSFSGFLVASLLTGLAMLLALYSRAFRDFLNALNVFLQSVSVLVWTIVFIMLFGV 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN---DFKEVASSFHITGWRWWRYIILP 500
                +   ++L+     +  L +  AG S+       ++ +      +  + +R+ I+P
Sbjct: 134 T----SSIATILVTAMASFPALLS--AGVSSSEKVIEKYRPLVVLLKPSKLQLYRHFIVP 187

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
           G  P  V+    A G A   S+V+E            G+G  +  S + G    V    L
Sbjct: 188 GTLPEMVSAGRVALGIALRISVVAEAFG------SAGGIGYQLVYSYDLGIKAGVFAWAL 241

Query: 561 IMCCFVLALNRFLWHPLYLY 580
           ++   ++ L++ L   L  +
Sbjct: 242 LLILLMITLDQLLLRRLEEW 261



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 13/194 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            S  +++ L T +   LA  SR     L  +   +QS+ +L +    ++ F        +
Sbjct: 81  FSGFLVASLLTGLAMLLALYSRAFRDFLNALNVFLQSVSVLVWTIVFIMLFG-------V 133

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + +A I     +    +  +   S   +      +    + S  Q + +  VP ++P +
Sbjct: 134 TSSIATILVTAMASFPALLSAGVSSSEKVIEKYRPLVVLLKPSKLQLYRHFIVPGTLPEM 193

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V    +++       V +E            GIG  +  +        +    L ++ ++
Sbjct: 194 VSAGRVALGIALRISVVAEAFGSAG------GIGYQLVYSYDLGIKAGVFAWALLLILLM 247

Query: 253 FLYDQLLFRPMIVW 266
              DQLL R +  W
Sbjct: 248 ITLDQLLLRRLEEW 261


>gi|158333856|ref|YP_001515028.1| binding-protein-dependent inner membrane transport system
           [Acaryochloris marina MBIC11017]
 gi|158304097|gb|ABW25714.1| binding-protein-dependent inner membrane transport system, putative
           [Acaryochloris marina MBIC11017]
          Length = 209

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 69/184 (37%), Gaps = 12/184 (6%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +  A II +P+   I     +   I     ++   P+     L++  +    +     
Sbjct: 24  IALAGAVIIAVPIAWIIYRWTWLQGPIMAVLGVIYTIPSLALMILLIPLLGLSSMT---- 79

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + M    Q  ++ +++ G  + P    E A    ++ W+ W  + +P + P ++ G  
Sbjct: 80  AIVAMTLYAQVILVRSILVGLQSIPQPILEAAQGMGMSAWQCWWQVQVPLMRPVFLAGVR 139

Query: 512 TA-CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            A        +I ++  + G   L   G+        + G + ++  G +++    +  N
Sbjct: 140 LATTVMIALGTIAAKFGAGGLGVLLFEGI-------AQAGRYDKIWAGTIVVGLLAVISN 192

Query: 571 RFLW 574
             LW
Sbjct: 193 GLLW 196



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 71/188 (37%), Gaps = 16/188 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+  +++     A +  +   L   ++ +L ++ +IP L  +   +             
Sbjct: 24  IALAGAVIIAVPIAWIIYRWTWLQGPIMAVLGVIYTIPSLALMILLIPLLGL-------- 75

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + + AI A+       +  S+   L +IP+ + E ++   +S WQ +W + VP   P  +
Sbjct: 76  SSMTAIVAMTLYAQVILVRSILVGLQSIPQPILEAAQGMGMSAWQCWWQVQVPLMRPVFL 135

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVI 252
             + ++             +          G+G  +   I +      ++A  + +  + 
Sbjct: 136 AGVRLA-------TTVMIALGTIAAKFGAGGLGVLLFEGIAQAGRYDKIWAGTIVVGLLA 188

Query: 253 FLYDQLLF 260
            + + LL+
Sbjct: 189 VISNGLLW 196


>gi|322514658|ref|ZP_08067687.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
 gi|322119403|gb|EFX91509.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
          Length = 225

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  +++I +S+P    L
Sbjct: 21  TIETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVVINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVRKFYLPESLPILINGITLTL 162



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 14/163 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    V      T++      ++A ++ +P+G          I   P + 
Sbjct: 2   WDSFMQELTPQMWGLVGTSTIETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVVINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
               P    E A S   T W+  R   LP   P  + G     
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVRKFYLPESLPILINGITLTL 162


>gi|317121549|ref|YP_004101552.1| binding-protein-dependent transporters inner membrane component
           [Thermaerobacter marianensis DSM 12885]
 gi|315591529|gb|ADU50825.1| binding-protein-dependent transport systems inner membrane
           component [Thermaerobacter marianensis DSM 12885]
          Length = 628

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 72/528 (13%), Positives = 154/528 (29%), Gaps = 55/528 (10%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD---IVDIVPITLDVHSL-- 61
               +SR I P +      V++ G +   L     T+   D    ++   +  D      
Sbjct: 66  RRGAVSRAILPYLAVAPLVVILWGYVVYPLWATFATSAWVDGRFTLEHYRVFFDRTHTAP 125

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPIL------- 113
            +    +    + +++   +     A L  +       +   ++ +  S+P L       
Sbjct: 126 LEALVTSLWISVLSVLTCGVVGVALAFLLNRYEFPGRRMFQTLVLVPMSLPPLVGVLSFM 185

Query: 114 ------GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLE 166
                 G +   V + + L         LA + A+ T  ++   +     +L  +   LE
Sbjct: 186 FLYGESGIIPRAVQHLLGLEQVPFALRGLAGVLAVHTFTMYPYFYMPAAAALQGLDPSLE 245

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +RS   SGWQ +  + +P   P LV   ++          A  +  V  T+       
Sbjct: 246 EAARSLGASGWQAWRRVTLPMLTPALVAGALLVFMHSLASYTAPLLFGVDRTLT------ 299

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL 286
             + + +   +    L + L+ +  +     LLF         +R       +       
Sbjct: 300 --MQIYVSRTNGDLALASALSTVLSLVSVAFLLFMRWYQERRVYRSLSKGAAHHRTEVRN 357

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
            L R    +                 +              P  +         S     
Sbjct: 358 PLLRWVALVLSALGVVLVLLPVFVLVLISFSVNARWTVQVLPPAYTLDNYRAIFSDPRFW 417

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
                    ++     +  + V        L     G +    ++   +  +++ I +  
Sbjct: 418 EPVATSLKTSLLATLAAAVFSVAAAYAVTRLNFCGRGLLDAAIMLPWALPGTVVAINL-- 475

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  I++  +P              P  +  +         W+  L  F     ++F
Sbjct: 476 -------IAAFNEP-------------TPFSLGQILVG----TFWILPLAYFVRLMPLVF 511

Query: 467 -NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            +  A  +      +E A S   T    +R ++LP + P  + GA+ A
Sbjct: 512 RSSAAALAQQDPSLEEAARSLGATWGYTFRRVVLPLMLPGVLGGALLA 559



 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 87/333 (26%), Gaps = 31/333 (9%)

Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335
               P           +      G                L       R       L   
Sbjct: 19  ASEAPPLPVEGSGGGGSPLPAGTGGGGGLLPPGTGAGGGLLPAARPGRRGAVSRAILPYL 78

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCI--TMFRVVV 392
           +   +  +L  +    +       AW    + + H+  + D  +   L  +  +++  V+
Sbjct: 79  AVAPLVVILWGYVVYPLWATFATSAWVDGRFTLEHYRVFFDRTHTAPLEALVTSLWISVL 138

Query: 393 LIIIASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFPANV-------------FFPLVV 438
            ++   ++ + +   +           Q    +  + P  V               P  V
Sbjct: 139 SVLTCGVVGVALAFLLNRYEFPGRRMFQTLVLVPMSLPPLVGVLSFMFLYGESGIIPRAV 198

Query: 439 SCVSYYHLNPNLWLSLLMIFG----TQWYILFN-VIAGASAFPNDFKEVASSFHITGWRW 493
             +      P     L  +      T +   +    A         +E A S   +GW+ 
Sbjct: 199 QHLLGLEQVPFALRGLAGVLAVHTFTMYPYFYMPAAAALQGLDPSLEEAARSLGASGWQA 258

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           WR + LP + P  V GA+     +  AS  + +       L        I  S   G   
Sbjct: 259 WRRVTLPMLTPALVAGALLVFMHS-LASYTAPLLFGVDRTLTMQ-----IYVSRTNGDLA 312

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                  ++    +A    L+   Y    R  R
Sbjct: 313 LASALSTVLSLVSVAF--LLFMRWYQ-ERRVYR 342


>gi|296133808|ref|YP_003641055.1| phosphate ABC transporter, inner membrane subunit PstC [Thermincola
           sp. JR]
 gi|296032386|gb|ADG83154.1| phosphate ABC transporter, inner membrane subunit PstC [Thermincola
           potens JR]
          Length = 297

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 67/157 (42%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           +   +L +  +S++  F    +A         L P ++++  IP +  G++  +V+    
Sbjct: 84  SLFAVLLSAPLSIISAFFITEIA--PSIGQRFLQPAVELLAGIPSVVYGWIGLSVLVPFI 141

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +G  + A   +    +   T S+    +  +P   +E S +   + WQ    + 
Sbjct: 142 RSTFGGLGVSVLAAGLVLAVMILPTTVSVATDRIKALPNSYKEASYALGSTRWQLIRRVL 201

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            P ++PG++  +++ ++  +   +A +M++     IP
Sbjct: 202 FPAALPGIMTGLILGLARAFGEALAVQMVLGNVRKIP 238



 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 7/131 (5%)

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI 469
             +QP  +LLA  P+ V+  + +S +       +  L  ++  + L++         +V 
Sbjct: 112 RFLQPAVELLAGIPSVVYGWIGLSVLVPFIRSTFGGLGVSVLAAGLVLAVMILPTTVSVA 171

Query: 470 -AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                A PN +KE + +   T W+  R ++ P   P  +TG I     A+  ++  ++  
Sbjct: 172 TDRIKALPNSYKEASYALGSTRWQLIRRVLFPAALPGIMTGLILGLARAFGEALAVQMVL 231

Query: 529 WGHIHLRTTGL 539
                +  + L
Sbjct: 232 GNVRKIPHSLL 242


>gi|254822449|ref|ZP_05227450.1| ABC transporter, permease protein [Mycobacterium intracellulare
           ATCC 13950]
          Length = 238

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L             A+  S L       +   + R  + +V  ++ ++S+P LG   
Sbjct: 20  PVGLAARILEHLEYTAIAVGASALIAVPVGLVIGHTGRGTLFVVGAVNGLRSLPTLG--- 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                 +             ++ A+    V  +    Y  + N+   + + +R+  ++  
Sbjct: 77  -----VLLFGTLLFGLGLGPSLVALMLLGVPALLAGTYAGIANVDPTVVDAARAMGMTEA 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + VP ++P ++  +           +             L G+G Y+   IKE++
Sbjct: 132 QVLLRVEVPNALPLMLGGLR-------NATLQVVATATVAAYASLGGLGRYLIDGIKERE 184

Query: 238 LLAILYAMLTM 248
               L   L +
Sbjct: 185 FHLALVGALMV 195



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 11/201 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++I Y++    +   + +       +    + +  +++I +PVG+ IG     +  +   
Sbjct: 6   RAISYVLTVDNWTGPVGLAARILEHLEYTAIAVGASALIAVPVGLVIGHTGRGTLFVVGA 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L + P      +++     + L     L  LM+ G    +L    AG +       +
Sbjct: 66  VNGLRSLPTLG---VLLFGTLLFGLGLGPSLVALMLLG-VPALLAGTYAGIANVDPTVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P  + G         NA++     +    +    GLG 
Sbjct: 122 AARAMGMTEAQVLLRVEVPNALPLMLGGLR-------NATLQVVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIM 562
           Y+ +  ++  F   ++G L++
Sbjct: 175 YLIDGIKEREFHLALVGALMV 195


>gi|118470325|ref|YP_887246.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118171612|gb|ABK72508.1| ABC transporter, permease protein OpuCB [Mycobacterium smegmatis
           str. MC2 155]
          Length = 215

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  ++IA+   + VG+ I   P  S+       +    P+     ++V+ +    L   
Sbjct: 25  VVQTLLIATAAALVVGVLIYRSPWASAIGNTLTSVGLTIPSYALLGVLVAFIGIGVLPSV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L           IL NV+ G         E A    ++       + +P  +P  +TG
Sbjct: 85  IMLVFFGFL----PILRNVLVGLGGVDRALIESARGMGMSRLSTLLRLEIPLAWPVIMTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAY----IAESTEKGSFPEVVLGVLIMCCF 565
              +       + ++  A          GLG Y    I+ +    +   +V G + +   
Sbjct: 141 VRVSAQMLMGVAAIAAYALG-------PGLGGYIFSGISRTGGANATNSIVAGTVGILIL 193

Query: 566 VLALNRFL 573
            + L+  L
Sbjct: 194 AVVLDTVL 201



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   A +    ++  ++I+     V   L  +S     +   +  +  +IP    L 
Sbjct: 11  WAVLSFLAYQHMSFVVQTLLIATAAALVVGVLIYRSPWASAIGNTLTSVGLTIPSYALLG 70

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V +         IG   + I  +F   +  +  ++   L  + R L E +R   +S  
Sbjct: 71  VLVAFIG-------IGVLPSVIMLVFFGFL-PILRNVLVGLGGVDRALIESARGMGMSRL 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                L +P + P ++  + +S +     V A     +G      PG+G YI   I    
Sbjct: 123 STLLRLEIPLAWPVIMTGVRVS-AQMLMGVAAIAAYALG------PGLGGYIFSGISRTG 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
                 +++     I +   +L
Sbjct: 176 GANATNSIVAGTVGILILAVVL 197


>gi|315652823|ref|ZP_07905797.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485025|gb|EFU75433.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 226

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 68/155 (43%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILD 105
           ++   + +     +T   M+ +  ISL+F  ++  +          K+  +  ++  +++
Sbjct: 12  VSAKPNEIIDATLQTVNMMVLSGAISLIFGLIFGVIVVVTSPRGILKNAVIYNIMDKLIN 71

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +SIP    L   ++ F  +  G  IG +  AI  +    V   T  +  +L  + + L
Sbjct: 72  VFRSIP-FVILLAALIPFTRMVVGTAIGTK-GAILPLVFGTVPFFTRQIESALYEVDKGL 129

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   S  +  + + +  S+PG++  + ++ 
Sbjct: 130 IEAAQSMGSSPIEIIFRVYLRESLPGIIRGVQITF 164



 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 9/146 (6%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T Q V  ++  G I++    ++  +  ++  P GI       I + +     +  + P  
Sbjct: 23  TLQTVNMMVLSGAISLI-FGLIFGVIVVVTSPRGIL--KNAVIYNIMDKLINVFRSIPFV 79

Query: 432 ----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P     V          L L  +FGT  +    + +          E A S  
Sbjct: 80  ILLAALIPFTRMVVGTAIGTKGAILPL--VFGTVPFFTRQIESALYEVDKGLIEAAQSMG 137

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITA 513
            +       + L    P  + G    
Sbjct: 138 SSPIEIIFRVYLRESLPGIIRGVQIT 163


>gi|157692992|ref|YP_001487454.1| phosphate ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|194017756|ref|ZP_03056366.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus
           ATCC 7061]
 gi|157681750|gb|ABV62894.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
 gi|194010656|gb|EDW20228.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus
           ATCC 7061]
          Length = 294

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 77/203 (37%), Gaps = 6/203 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   +++G+ + ++    +      +            +      +   +   M+I++  
Sbjct: 20  IITAILVGLFSYIIFNGAKELNFDFLTTRSSAIGSGGGIRDQLFNSFYILFITMLITVPL 79

Query: 83  TFVYATLAAKSRRLGMV---LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A+      V   +   ++++ S+P +    F ++ F+NL          A  
Sbjct: 80  GVGGGVYMAEYAPQNKVTDFIRTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   V  M      +L ++P+D +E S +  ++ W     + +P ++P ++   +++
Sbjct: 140 LTVFNLPV--MVRVTEDALRSVPKDQKEASLALGVTKWHTVKTVLIPGALPSIITGAILA 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPL 222
            SG  F   A+ +   G +   L
Sbjct: 198 -SGRVFGEAAALLFTAGLSTPRL 219



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 19/147 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +F    ++ I  +I +P+G+  G           ++  I+   ++L++ P+     +V+ 
Sbjct: 62  LFNSFYILFITMLITVPLGVGGGVYMAEYAPQNKVTDFIRTCIEVLSSLPS-----IVIG 116

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWR 492
                           +I G     +FN             + P D KE + +  +T W 
Sbjct: 117 MFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVRVTEDALRSVPKDQKEASLALGVTKWH 176

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN 519
             + +++PG  P  +TGAI A G  + 
Sbjct: 177 TVKTVLIPGALPSIITGAILASGRVFG 203


>gi|315657065|ref|ZP_07909950.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492457|gb|EFU82063.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 356

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 70/181 (38%), Gaps = 7/181 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMVISLL 81
            F  + G   +L+  +    + R ++   P+  +     +      T   +  ++++S+ 
Sbjct: 32  VFGAIGGFFLLLIVALAAYIMVRGLLSFDPVFLSFSHDGIMNQVFNTVYLVFLSLIVSVA 91

Query: 82  FTFVYATLAAKSRRLGM---VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A+          +   ++ + S+P +    F  + F+ +   +     LA 
Sbjct: 92  LGVPAGIYMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNL--LAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A+    +  +T S   +L  +P DL+  S +   + W     + +P ++P L+  +++
Sbjct: 150 ALAVSILNLPLVTTSTESALRALPSDLKYGSAALGATHWTTIVRVQLPAALPHLMTGVVL 209

Query: 199 S 199
           +
Sbjct: 210 A 210



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 69/173 (39%), Gaps = 5/173 (2%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F+  ++  +A  I  + +      F       ++     T++ V + +I++  + +P GI
Sbjct: 39  FFLLLIVALAAYIMVRGLLSFDPVFLSFSHDGIMNQVFNTVYLVFLSLIVSVALGVPAGI 98

Query: 407 WIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           ++         +  I+   + L++ P+ V   F  +V  +        L  +L +     
Sbjct: 99  YMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNLLAGALAVSILNL 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +  +  +   A P+D K  +++   T W     + LP   P+ +TG + A 
Sbjct: 159 PLVTTSTESALRALPSDLKYGSAALGATHWTTIVRVQLPAALPHLMTGVVLAA 211


>gi|237799629|ref|ZP_04588090.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022484|gb|EGI02541.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 140

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  VL+  I+ I      +   P DI+  +   L   +L ++ S + LR+LS   I    
Sbjct: 40  VIVVLLEIIVRIGWLPSYQMPAPSDILLTLR-DLADGALWKHISASLLRVLSGFFIGAGL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             V+A     SR     L P    ++SIP L ++   +++  
Sbjct: 99  ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLG 140



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 26/58 (44%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
            ++ RV+    I + + +    W+G      + ++P    L + P+  + PL++  + 
Sbjct: 83  ASLLRVLSGFFIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLG 140


>gi|86160421|ref|YP_467206.1| phosphate ABC transporter inner membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776932|gb|ABC83769.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 336

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 16/206 (7%)

Query: 76  MVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMN 125
             +S+L +      AA        RRL  VL P+++++  IP  +LGF    V+  +  +
Sbjct: 116 TAVSMLVSVPVGIAAALYASEFAPRRLREVLKPVIELLAGIPSVVLGFFALMVMATWLQS 175

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        + A   +  + +  +      +L  +PR   E S +   + W+  + + +
Sbjct: 176 AFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQAVPRAYREASLALGATRWETAFRVVL 235

Query: 186 PFSMPGLVWNMMM----SMSGGWFFVVAS--EMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           P + PG++  +++    S+      ++AS    I        +  + + IA  + E    
Sbjct: 236 PAAAPGVLAGVVLGFGRSIGETMIVLMASGNAAITSWSLGDSVRTLPATIAAEMGEVVFG 295

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIV 265
              Y++L  +GV       +   +  
Sbjct: 296 GAHYSVLFFIGVELFLFTFVLNALAA 321



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 15/176 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
             F +Q V  V     I +F   + +  ++ ++ +PVGI             +   ++P 
Sbjct: 90  PGFMWQPVSGVPKYSMIPLFVGTLKVTAVSMLVSVPVGIAAALYASEFAPRRLREVLKPV 149

Query: 422 AQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
            +LLA  P+ V     +  ++        +    N  ++ L +  T   ++F V      
Sbjct: 150 IELLAGIPSVVLGFFALMVMATWLQSAFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQ 209

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A P  ++E + +   T W     ++LP   P  + G +   G +   +++  +AS 
Sbjct: 210 AVPRAYREASLALGATRWETAFRVVLPAAAPGVLAGVVLGFGRSIGETMIVLMASG 265


>gi|13476944|ref|NP_108514.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027707|dbj|BAB54300.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 387

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L +++ +++          +  RL   ++ +L+I+Q+IP +      +     +      
Sbjct: 184 LGSLLAAVVAGLPLGIFCHRVERLRAGVLNVLNIIQTIPSIALFGLLIAPLGWIATHVPG 243

Query: 133 GAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            A L         A  A+F   +  +  +    L  +PR   + +R   ++  Q+ + + 
Sbjct: 244 AAALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGMGMTDRQRLFGVE 303

Query: 185 VPFSMPGLVWNMMM 198
            P + P ++  + +
Sbjct: 304 FPLAFPVILTGIRI 317



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 66/194 (34%), Gaps = 14/194 (7%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +L  +      +       +  + +  AW  +  +  +    D  +      +T+   + 
Sbjct: 128 RLNLSPWARVGVLAAAAVAIGLLLVSGAWNDLSILKEYANRADSFWAEGSKHVTLA--LG 185

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            ++ A +  +P+GI+      + + +     ++   P+   F L+++ + +   +     
Sbjct: 186 SLLAAVVAGLPLGIFCHRVERLRAGVLNVLNIIQTIPSIALFGLLIAPLGWIATHVPGAA 245

Query: 453 SL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +L             +   +   ++ N + G +  P    + A    +T  +    +  P
Sbjct: 246 ALGIRGIGTAPAFVALFLYSLLPVVANTVVGLAGVPRAANDAARGMGMTDRQRLFGVEFP 305

Query: 501 GIFPYYVTGAITAC 514
             FP  +TG     
Sbjct: 306 LAFPVILTGIRIVL 319


>gi|293194672|ref|ZP_06610040.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces odontolyticus F0309]
 gi|292819651|gb|EFF78670.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces odontolyticus F0309]
          Length = 238

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 16/222 (7%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97
           G+         + +    L    +    ++     L  + ++ L      T    + + G
Sbjct: 7   GMNILLDALTWLTVPAHWLGESGILVRTAQHLGLTLLIVTLAALIALPLGTWIGHTGK-G 65

Query: 98  MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157
             LV      ++IP LG LT   ++         +        A+    +  +  + Y  
Sbjct: 66  RWLVSATGAARAIPTLGVLTLAGLWLGIGLAAPTL--------ALLVLAIPPLLSATYSG 117

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + + PR   + +R+  L+  Q    +  P +   +   +           +         
Sbjct: 118 IASTPRATVDAARAIGLTEPQVLAQVEAPHAAGLVAAGVR-------SATLQVIATTTLA 170

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 G+G ++   +K +D   ++   + ++ +  + D LL
Sbjct: 171 AYTANYGLGRFLYEGLKTRDYAEMIGGAIVVVALALVTDALL 212



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 17/233 (7%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
           G  + I   ++ ++     +     ++      +   ++++ +A++I +P+G WIG    
Sbjct: 5   GAGMNILLDALTWLTVPAHWLGESGILVRTAQHLGLTLLIVTLAALIALPLGTWIG-HTG 63

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
               +        A P      L    +      P L L +L I      +L    +G +
Sbjct: 64  KGRWLVSATGAARAIPTLGVLTLAGLWLGIGLAAPTLALLVLAIP----PLLSATYSGIA 119

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           + P    + A +  +T  +    +  P        G  +A       ++     +    +
Sbjct: 120 STPRATVDAARAIGLTEPQVLAQVEAPHAAGLVAAGVRSA-------TLQVIATTTLAAY 172

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
               GLG ++ E  +   + E++ G +++    L  +  L         R LR
Sbjct: 173 TANYGLGRFLYEGLKTRDYAEMIGGAIVVVALALVTDALL-----ALIARRLR 220


>gi|256843977|ref|ZP_05549464.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           125-2-CHN]
 gi|293380951|ref|ZP_06626984.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus 214-1]
 gi|256613882|gb|EEU19084.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           125-2-CHN]
 gi|290922482|gb|EFD99451.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus 214-1]
          Length = 302

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ + I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLFICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP  F   +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAAFGGILTGVVLGLARAIGEALAVAMVIGKTRSFATSLL 247



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  + I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLFICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAAFGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244


>gi|158319319|ref|YP_001511826.1| phosphate ABC transporter, inner membrane subunit PstC
           [Alkaliphilus oremlandii OhILAs]
 gi|158139518|gb|ABW17830.1| phosphate ABC transporter, inner membrane subunit PstC
           [Alkaliphilus oremlandii OhILAs]
          Length = 311

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 85/224 (37%), Gaps = 13/224 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +  ++    F + A V V+ ++ I ++   +       + +   TL     P        
Sbjct: 32  LGEQVIETFFFVCALVAVLSVVIITVYIFVKGVPAISEIGLRNFTLGQKWKPLQGVFGIF 91

Query: 71  RMLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPIL--GFLTF 118
            M+   + +    ++       L A          L  ++ P ++++  IP +  GF   
Sbjct: 92  PMIIGSIYATLGAIVMGVPIGVLTAVFLAEVAPGWLVKIVKPAVELLAGIPSVVYGFFGL 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGW 177
            V+  +        G  L A+  +    +     ++ + ++ ++P++ +E S +   S  
Sbjct: 152 VVIVPLISKHFGGPGNSLLAVNVMLGIMILPTIVNISENAIRSVPKEYKEASLALGASQI 211

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           Q  + + +P +  G++ ++++ +       +A  ++      IP
Sbjct: 212 QTIFKVILPAARSGILTSVVLGIGRAIGETMAVILVAGNTPAIP 255



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 70/196 (35%), Gaps = 9/196 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ ++ F         I  ++          Q V  +  +   +++  +  I++   I +
Sbjct: 54  IITVYIFVKGVPAISEIGLRNFTLGQKWKPLQGVFGIFPMIIGSIYATLGAIVMGVPIGV 113

Query: 403 PVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSL 454
              +++       +   ++P  +LLA  P+ V+    +  +       +     +L    
Sbjct: 114 LTAVFLAEVAPGWLVKIVKPAVELLAGIPSVVYGFFGLVVIVPLISKHFGGPGNSLLAVN 173

Query: 455 LMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +M+       + N+      + P ++KE + +   +  +    +ILP      +T  +  
Sbjct: 174 VMLGIMILPTIVNISENAIRSVPKEYKEASLALGASQIQTIFKVILPAARSGILTSVVLG 233

Query: 514 CGGAWNASIVSEVASW 529
            G A   ++   + + 
Sbjct: 234 IGRAIGETMAVILVAG 249


>gi|303251230|ref|ZP_07337408.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303253058|ref|ZP_07339209.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302648090|gb|EFL78295.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302649772|gb|EFL79950.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 220

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  I++I +S+P    L
Sbjct: 16  TLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVIINIGRSVP-FIIL 74

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 75  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 133

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 134 WQVVSKFYLPESLPILINGITLTL 157



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 58/208 (27%), Gaps = 14/208 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQ 419
           +   T Q    V      T++      ++A ++ +P+G          I   P +   + 
Sbjct: 1   MQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLD 60

Query: 420 PFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               +  + P      V  P     V          + L +     +  L          
Sbjct: 61  VIINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNALLEI 118

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P    E A S   T W+      LP   P  + G           S ++     G +   
Sbjct: 119 PAGLTEAAKSMGATNWQVVSKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGGLGNL 178

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               G +      K     +++ ++++ 
Sbjct: 179 AISYGEHRNMVYVKWISTIIIVAIVMIS 206


>gi|289550796|ref|YP_003471700.1| Phosphate transport system permease protein PstC [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658291|ref|ZP_07911163.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|289180328|gb|ADC87573.1| Phosphate transport system permease protein PstC [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496620|gb|EFU84943.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 311

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 111/287 (38%), Gaps = 24/287 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------QYA 65
           S +I P I  +++F+ ++  I IL+  + ET      V I          P         
Sbjct: 25  SDKIVPMILAVISFISILVTIGILVTLLTETITFFTRVSITEFLFTTEWAPFSSSPKYGI 84

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF---- 115
               +  L   +I+ +F       AA       S R   ++ PIL+I+  IP + F    
Sbjct: 85  WALVIGTLKITLIAAIFAVPIGLGAAIYLSEYASDRTRRIIKPILEILAGIPTIVFGFFA 144

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LTF      +++P       ++    +    +  +T     ++ ++P  + E +     +
Sbjct: 145 LTFITPILRSIFPELGSFNSISPGLVVGVMIIPLITSMSEDAMSSVPNKIREGALGLGAT 204

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPG-----IGSY 228
            ++    + +P ++ G++ ++++++S   G   +V+          + L G      G  
Sbjct: 205 KFEVATKVVLPAAISGVLASIVLAISRAIGETMIVSLAAGSTPTASLDLTGSIQTMTGYI 264

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           + +A  +    + +Y  +  +G       LL   +  W S +FR E 
Sbjct: 265 VQVATGDATYGSDVYYSIYAVGFTLFIFTLLMNLLSQWISKRFREEY 311



 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 21/214 (9%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA+I  +P+G+                 I+P  ++LA  P  VF         P++ S
Sbjct: 95  TLIAAIFAVPIGLGAAIYLSEYASDRTRRIIKPILEILAGIPTIVFGFFALTFITPILRS 154

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                    ++   L++       I        S+ PN  +E A     T +     ++L
Sbjct: 155 IFPELGSFNSISPGLVVGVMIIPLITSMSEDAMSSVPNKIREGALGLGATKFEVATKVVL 214

Query: 500 PGIFPYYVTGAITACGGAWN--ASIVSEVASWGHIHLRTTG-----LGAYIAESTEKGSF 552
           P      +   + A   A      +     S     L  TG      G  +  +T   ++
Sbjct: 215 PAAISGVLASIVLAISRAIGETMIVSLAAGSTPTASLDLTGSIQTMTGYIVQVATGDATY 274

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              V   +    F L +   L + L  + ++  R
Sbjct: 275 GSDVYYSIYAVGFTLFIFTLLMNLLSQWISKRFR 308


>gi|254387987|ref|ZP_05003224.1| glycine betaine/carnitine/choline ABC transporter [Streptomyces
           clavuligerus ATCC 27064]
 gi|294817536|ref|ZP_06776178.1| Binding-protein-dependent transport systems inner membrane
           component [Streptomyces clavuligerus ATCC 27064]
 gi|326446141|ref|ZP_08220875.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces clavuligerus ATCC 27064]
 gi|197701711|gb|EDY47523.1| glycine betaine/carnitine/choline ABC transporter [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322351|gb|EFG04486.1| Binding-protein-dependent transport systems inner membrane
           component [Streptomyces clavuligerus ATCC 27064]
          Length = 239

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            +I  LL  +      R +  I   TL+   +    ++       + V+ L+       L
Sbjct: 13  AVIATLLALLYVWVHARPLDSIEQRTLNPTYITDAVTQHLWLTSVSTVLVLVLALGGGIL 72

Query: 90  AAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             +   RRL  ++  + +I Q+ P +G L    +++   +   V+G    ++  +     
Sbjct: 73  LTRPALRRLAPLVTGLANIGQAAPAIGLLVLLSLWWGIGFGTAVMGMVAYSVLPVLR--- 129

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
                +    +  +   + + +R   +      + + +P ++P ++  +  +       +
Sbjct: 130 -----NTIVGIQQVDAPVVDAARGLGMGSSAVLFRVELPLAVPVILAGIRTA-------L 177

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           V +  +    T +   G+G  I   IK Q    ++   + +  +  L D L
Sbjct: 178 VFNVGVGTLATFVNAGGLGDMIVNGIKLQRTPVLVTGAVLVASLALLIDWL 228



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 17/188 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVS 442
           ++   V  ++  ++ +  GI          ++ P    LA      PA     L+     
Sbjct: 52  LWLTSVSTVLVLVLALGGGIL--LTRPALRRLAPLVTGLANIGQAAPAIGLLVLLSLWWG 109

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  +     M+  +   +L N I G         + A    +        + LP  
Sbjct: 110 IGFGTAVMG----MVAYSVLPVLRNTIVGIQQVDAPVVDAARGLGMGSSAVLFRVELPLA 165

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P  + G  TA        + +         +   GLG  I    +    P +V G +++
Sbjct: 166 VPVILAGIRTA-------LVFNVGVGTLATFVNAGGLGDMIVNGIKLQRTPVLVTGAVLV 218

Query: 563 CCFVLALN 570
               L ++
Sbjct: 219 ASLALLID 226


>gi|224532639|ref|ZP_03673260.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           WI91-23]
 gi|224512419|gb|EEF82799.1| phosphate ABC transporter, permease protein [Borrelia burgdorferi
           WI91-23]
          Length = 196

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 73/173 (42%), Gaps = 18/173 (10%)

Query: 80  LLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +        + A+   ++    +L   +DI+ SIP + F  F +++F+ ++   ++   +
Sbjct: 1   ICIGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIFGLFGLIFFVPIFGIGILSGAI 60

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            +   I       +  +  ++   IP+  +  S +   +  +    + VP ++PG++  +
Sbjct: 61  TSSLMILPM----IVKTTEEAFKTIPKSYKYASFALGANKTETIIKVMVPAAIPGILTGI 116

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           ++++              +G+T + L  +G+ + LA    +    L   L ML
Sbjct: 117 VLAIGRA-----------LGETAVLLFTMGTNLGLATNLNEPSRTLTVHLLML 158



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 400 IWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWL 452
           I I  GI +            +     +L++ PA +F        V       L+  +  
Sbjct: 3   IGIGTGIMLAEYTSNKIFYKILSMSVDILSSIPAIIFGLFGLIFFVPIFGIGILSGAITS 62

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           SL+++      I+          P  +K  + +           +++P   P  +TG + 
Sbjct: 63  SLMILPM----IVKTTEEAFKTIPKSYKYASFALGANKTETIIKVMVPAAIPGILTGIVL 118

Query: 513 ACGGA 517
           A G A
Sbjct: 119 AIGRA 123


>gi|270307590|ref|YP_003329648.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           VS]
 gi|270153482|gb|ACZ61320.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           VS]
          Length = 286

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 84/213 (39%), Gaps = 12/213 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI--- 78
           + A V ++ ++ I +  I+        V+ +    +    P Y     L M+   ++   
Sbjct: 17  ITALVSILVLLAIAVFIIKGGLPLFGEVNPLDFLFEESWSPTYGEYGILSMIVGSLLVTL 76

Query: 79  -SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--G 129
            ++L         A        R++  +L P ++++  IP + +    ++  +      G
Sbjct: 77  GAMLIAVPLGIACAILLAEVAPRKVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAVRSLG 136

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
               + LAA+  +    +  +      SL  +PR   E S +   S WQ  W++ +P + 
Sbjct: 137 GTGYSILAAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLLPAAR 196

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            G+  ++++ M       +A  M++    +IP 
Sbjct: 197 SGVGASIVLGMGRAIGETMAMIMVIGNAVIIPT 229



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--- 396
           ++ ++ I     +    I       G +       +  +    G   +  ++V  ++   
Sbjct: 17  ITALVSILVLLAIAVFIIKGGLPLFGEVNPLDFLFEESWSPTYGEYGILSMIVGSLLVTL 76

Query: 397 -ASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCV-----SYY 444
            A +I +P+GI             + + ++P  +LL   P+ V+  + +  +     S  
Sbjct: 77  GAMLIAVPLGIACAILLAEVAPRKVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAVRSLG 136

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
               ++  ++L++       + ++      A P  ++E + +   + W+   +++LP   
Sbjct: 137 GTGYSILAAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLLPAAR 196

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                  +   G A   ++   +     + + T+
Sbjct: 197 SGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTS 230


>gi|147919154|ref|YP_687113.1| high-affinity phosphate ABC-type import system, permease component
           2 [uncultured methanogenic archaeon RC-I]
 gi|110622509|emb|CAJ37787.1| high-affinity phosphate ABC-type import system, permease component
           2 [uncultured methanogenic archaeon RC-I]
          Length = 287

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 18/254 (7%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              + + I+ I+  G+           +  +               +   +   +SLL  
Sbjct: 21  IVTIFLIIVFIVAQGLPVILSEGPANFVGGLKWSPEHNLYGILPMIIGTFAVTTLSLLIA 80

Query: 84  FVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP---GKVIGA 134
                  A          +  V+ P ++ + +IP + +  F ++  + L     G    +
Sbjct: 81  LPLGVGCAILISEVAPAGVRDVIRPAIETLAAIPSVVYGLFGLILLVPLIRDYLGGNGFS 140

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            LA    +    +  +      +L  +PR+L E S +   + WQ    + VP ++ G+V 
Sbjct: 141 ILAGGVVLAIMILPTIISVSEDALRAVPRELREGSLAMGATEWQVITGIVVPAALSGIVT 200

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG---------SYIALAIKEQDLLAILYAM 245
             +++M       +A  M+    T+IP   +          +        +   A+    
Sbjct: 201 GAVLAMGRSIGETMAVLMVCGNSTLIPTSVLDMVRPMTAAIALEWSYASGRHQDALFSIG 260

Query: 246 LTMLGVIFLYDQLL 259
           + +L VI + + ++
Sbjct: 261 IVLLIVIMILNLII 274



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 17/247 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             +++ +F       V +     +    +      ++  ++ +   T     + ++IA  
Sbjct: 23  TIFLIIVFIVAQGLPVILSEGPANFVGGLKWSPEHNLYGILPMIIGTFAVTTLSLLIALP 82

Query: 400 IWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVF----FPLVVSCVS--YYHLNPNLW 451
           + +   I I       +   I+P  + LAA P+ V+      L+V  +         ++ 
Sbjct: 83  LGVGCAILISEVAPAGVRDVIRPAIETLAAIPSVVYGLFGLILLVPLIRDYLGGNGFSIL 142

Query: 452 LSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              +++       + +V      A P + +E + +   T W+    I++P      VTGA
Sbjct: 143 AGGVVLAIMILPTIISVSEDALRAVPRELREGSLAMGATEWQVITGIVVPAALSGIVTGA 202

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGL------GAYIAEST--EKGSFPEVVLGVLIM 562
           + A G +   ++   +       + T+ L       A IA       G   + +  + I+
Sbjct: 203 VLAMGRSIGETMAVLMVCGNSTLIPTSVLDMVRPMTAAIALEWSYASGRHQDALFSIGIV 262

Query: 563 CCFVLAL 569
              V+ +
Sbjct: 263 LLIVIMI 269


>gi|319950145|ref|ZP_08024081.1| ABC transporter permease protein [Dietzia cinnamea P4]
 gi|319436186|gb|EFV91370.1| ABC transporter permease protein [Dietzia cinnamea P4]
          Length = 250

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 84/232 (36%), Gaps = 20/232 (8%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I     G+      R++ +    +L+  S  Q         ++ + I +        L 
Sbjct: 21  VIVAAAVGVLWWAFSRELDETQRASLNAASFTQRTLEHVQITVTVVAIVVAVGVPLGIL- 79

Query: 91  AKSRRLGMVLVPIL----DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
             +RR    L P+     +I Q+ P +G     +++      G  IG    A++++    
Sbjct: 80  -LTRRRTRFLAPVTVGFANIGQAAPAIGL--IVLLFLATNRTGFWIGVLPVAVYSLL--- 133

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
              +  +    + N+   L + +R   ++  +    + +P ++P ++  +  +       
Sbjct: 134 --PVLRNTIVGIRNVDPALIDAARGQGMTSARVLRSVELPLAVPFILAGLRTT------- 184

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +V +        ++   G+G +I    + QD   +    +  + +    D L
Sbjct: 185 LVLAVGTATLSFLVDAGGLGIFIDTGYRLQDYTTLAVGSVLAVCLALFVDWL 236



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 12/224 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407
            V+   A+G+ W +    ++       +           +   V ++ I   + +P+GI 
Sbjct: 20  LVIVAAAVGVLWWAFSRELDETQRASLNAASFTQRTLEHVQITVTVVAIVVAVGVPLGIL 79

Query: 408 IGFRPHISSKIQPFAQLLAAFPANV-FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
                  +  + P     A          L+V      +        L +   +   +L 
Sbjct: 80  --LTRRRTRFLAPVTVGFANIGQAAPAIGLIVLLFLATNRTGFWIGVLPVAVYSLLPVLR 137

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N I G         + A    +T  R  R + LP   P+ + G  T    A   + +S  
Sbjct: 138 NTIVGIRNVDPALIDAARGQGMTSARVLRSVELPLAVPFILAGLRTTLVLAVGTATLS-- 195

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                  +   GLG +I        +  + +G ++  C  L ++
Sbjct: 196 -----FLVDAGGLGIFIDTGYRLQDYTTLAVGSVLAVCLALFVD 234


>gi|312891831|ref|ZP_07751337.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311295665|gb|EFQ72828.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 296

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 26/262 (9%)

Query: 21  DLLAFVLVIGIINILLHGIQET---TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            L+   ++ GI  +LL           P D +         +          +       
Sbjct: 21  GLMVIAILAGIFLMLLWNTGAFFLKVKPFDFITGTQWNPSGNPANYGMLPLLVSTSLVTF 80

Query: 78  ISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLY 127
            ++          A        ++L   L P ++++ S+P   +GFL   V+      + 
Sbjct: 81  GAMCIAIPLGIGTAAYLSDYAGKKLKSFLKPAIEMLASVPSVAIGFLGIVVLGPGIARMA 140

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                   L     +    +  +      +L  +P   +E S S   + WQ    + +P 
Sbjct: 141 GQSNGLNALNGAILLAVMSLPTIITVTQDALEGVPNAYKEASYSVGANRWQTLIQVTIPA 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY----IALAIKEQDLLAI-- 241
           + PG++  +M+ +       +   M     +  P    G +       A    ++  +  
Sbjct: 201 AAPGILAAVMLGVGRAIGETMTVLMATGNASAFPT---GFFHSVRTMTATIAIEMGEVPY 257

Query: 242 ----LYAMLTMLGVIFLYDQLL 259
                YA+  +  V+FL   L+
Sbjct: 258 QTTHYYALFAIAAVLFLMTLLV 279



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 14/211 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  IF   +    A  +  +   +I             +     +    ++   A  
Sbjct: 25  IAILAGIFLMLLWNTGAFFLKVKPFDFITGTQWNPSGNPANYGMLPLLVSTSLVTFGAMC 84

Query: 400 IWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYH 445
           I IP+GI             + S ++P  ++LA+ P+            P +       +
Sbjct: 85  IAIPLGIGTAAYLSDYAGKKLKSFLKPAIEMLASVPSVAIGFLGIVVLGPGIARMAGQSN 144

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  ++L+   +   I+          PN +KE + S     W+    + +P   P 
Sbjct: 145 GLNALNGAILLAVMSLPTIITVTQDALEGVPNAYKEASYSVGANRWQTLIQVTIPAAAPG 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +   +   G A   ++   +A+       T
Sbjct: 205 ILAAVMLGVGRAIGETMTVLMATGNASAFPT 235


>gi|295835330|ref|ZP_06822263.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
 gi|295825430|gb|EDY43334.2| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
          Length = 224

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                L  L  ++IS L     A +     R G + V + ++ +++P         V  +
Sbjct: 27  LLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLANVGRAVPTFA------VLVL 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L       +E   + A+    V  +  + Y  +  + R++   +R   ++G Q  W + 
Sbjct: 81  LLLTPVGRLSEGPTVIALVLFAVPPLLTNAYVGMRGVDREVVRAARGMGMTGRQLLWRVE 140

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  + ++
Sbjct: 141 LPLAAPLVLTGVRIA 155



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   +V ++I+ ++ +PV + +G      +     A
Sbjct: 7   TWDWLSDPAHWSGENGIAHRLLEHVLLTLVCLLISCLVALPVALVLGHIGRGGALAVNLA 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++       L+    +  L++F     +L N   G      +    
Sbjct: 67  NVGRAVPTFAVL-VLLLLTPVGRLSEGPTVIALVLF-AVPPLLTNAYVGMRGVDREVVRA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 125 ARGMGMTGRQLLWRVELPLAAPLVLTGVRIAA 156


>gi|85714713|ref|ZP_01045700.1| Substrate-binding region and inner membrane component of ABC-type
           glycine betaine transport system [Nitrobacter sp.
           Nb-311A]
 gi|85698598|gb|EAQ36468.1| Substrate-binding region and inner membrane component of ABC-type
           glycine betaine transport system [Nitrobacter sp.
           Nb-311A]
          Length = 470

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F   +        L ++ A+    +  +  +    L  I   L E +R   ++  Q   
Sbjct: 39  WFGVGFSA---FGFLPSVLALTLYSMLPVLRNTITGLQGIDPALTEAARGAGMTARQSLA 95

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P ++  +  +    W    A+    +G T      +G+YI   ++ Q+ + +
Sbjct: 96  MVELPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LGNYIFAGLQTQNWVFV 148

Query: 242 LYAMLTMLGVIFLYDQLL 259
           L+  +    +  + DQLL
Sbjct: 149 LFGCIAAAVLALVVDQLL 166



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 8/135 (5%)

Query: 440 CVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        S+L +   +   +L N I G         E A    +T  +    + 
Sbjct: 39  WFGVGFSAFGFLPSVLALTLYSMLPVLRNTITGLQGIDPALTEAARGAGMTARQSLAMVE 98

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G  TA    W     +     G        LG YI    +  ++  V+ G
Sbjct: 99  LPLALPVIMAGIRTAA--VWVIGTATLSTPIGQTS-----LGNYIFAGLQTQNWVFVLFG 151

Query: 559 VLIMCCFVLALNRFL 573
            +      L +++ L
Sbjct: 152 CIAAAVLALVVDQLL 166


>gi|256810304|ref|YP_003127673.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
 gi|256793504|gb|ACV24173.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus fervens AG86]
          Length = 171

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A ++ KS +L + ++   +++Q+IP    +   V      +          AIFAI    
Sbjct: 2   AVISLKSEKLALTIIGFANLVQAIPSFAVVALVVPLLGIGFTP--------AIFAILLRA 53

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +  + Y  L  +   + + ++   L+ W+   Y+  P + P +   +        F 
Sbjct: 54  LLPIVKNTYVGLSEVDNSIIDAAKGIGLTEWEIIGYVRFPHAYPAMFAGIK-------FA 106

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            V +  I +   +I   G+G+ +   +   ++  +L   +  + +  L D
Sbjct: 107 AVLANSIAILTAIIGSGGLGTLVFEGLASFNIEKVLAGSIPAIILAVLID 156



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 14/175 (8%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              ++  I  FA L+ A P+     LVV  +              ++      I+ N   
Sbjct: 8   SEKLALTIIGFANLVQAIPSFAVVALVVPLLGIGFT----PAIFAILLRALLPIVKNTYV 63

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G S   N   + A    +T W    Y+  P  +P    G   A   A + +I++ +   G
Sbjct: 64  GLSEVDNSIIDAAKGIGLTEWEIIGYVRFPHAYPAMFAGIKFAAVLANSIAILTAIIGSG 123

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGT 582
                  GLG  + E     +  +V+ G +      + ++    F+   LY    
Sbjct: 124 -------GLGTLVFEGLASFNIEKVLAGSIPAIILAVLIDLSFSFMEKRLYKIPE 171


>gi|226364356|ref|YP_002782138.1| phosphate ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242845|dbj|BAH53193.1| phosphate ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 302

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 75/187 (40%), Gaps = 9/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR---DIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +    LV  ++  ++ GI   T        +  +  +     +      T L+ L   V+
Sbjct: 38  VALVPLVWVLVTAVIKGIPALTSATWFTHSLSGLTSSAAGGGIYHALVGTILQGLVCAVL 97

Query: 79  SLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           S+      A      A +  RL  +   ++DI+  +P +    F    ++  +     G 
Sbjct: 98  SIPLGLFVAIYLVEYADRKSRLAKLTTFMVDILSGVPSIVAALFIYALWIATFGFPKSGF 157

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +A    +    V  +  S  + L  +P+DL E S +  +  W+    + +P ++PG++ 
Sbjct: 158 AVALALVLLMVPV--VVRSTEEMLRIVPQDLREASYALGVPKWKTIAKIVLPTALPGIIT 215

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 216 GVMLALA 222



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +GV R         L +   +  ++ + W  V   +    A  S  +  +  +       
Sbjct: 17  VGVRRRITDLTATVLVTLAVLVALVPLVWVLVTAVIKGIPALTSATWFTHSLSGLTSSAA 76

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPAN 431
                  +   ++  ++ +++ IP+G+++             ++        +L+  P+ 
Sbjct: 77  GGGIYHALVGTILQGLVCAVLSIPLGLFVAIYLVEYADRKSRLAKLTTFMVDILSGVPSI 136

Query: 432 --VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
               F   +   ++        ++L ++      ++ +        P D +E + +  + 
Sbjct: 137 VAALFIYALWIATFGFPKSGFAVALALVLLMVPVVVRSTEEMLRIVPQDLREASYALGVP 196

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
            W+    I+LP   P  +TG + A 
Sbjct: 197 KWKTIAKIVLPTALPGIITGVMLAL 221


>gi|89075395|ref|ZP_01161812.1| putative ABC-type metal ion transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89048811|gb|EAR54381.1| putative ABC-type metal ion transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 228

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPI 112
           L +   +T   +  + +I  +           ++         +  +L  I++I +SIP 
Sbjct: 20  LIEALGQTLTMVFVSGLIGFVIGIPLGVTLHLTKKNGLLENTTVNNILGIIVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  IP  L E ++S 
Sbjct: 79  FIILLVAIIPFTRFVVGSSIGT-AAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG++  + +++
Sbjct: 138 GATPLQIIKKVLLPEALPGIINAVTITL 165



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 54/150 (36%), Gaps = 12/150 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V V  +I  +I IP+G+ +             +++ +     +  + P  +   + 
Sbjct: 27  TLTMVFVSGLIGFVIGIPLGVTLHLTKKNGLLENTTVNNILGIIVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P+   E A S   T  +  
Sbjct: 86  IIPFTRFVVGSSIGTAAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSMGATPLQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + ++LP   P  +           + S ++
Sbjct: 146 KKVLLPEALPGIINAVTITLVTLVSYSAMA 175


>gi|304317187|ref|YP_003852332.1| phosphate ABC transporter inner membrane protein
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778689|gb|ADL69248.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 301

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 73/161 (45%), Gaps = 5/161 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   +    + A++IS   +   A        +    +L P ++I   IP +  G++ 
Sbjct: 78  LQFILGSVFVSVFAILISTPLSISTAIFMVEIAKKFGRNLLQPAMEIFVGIPSVVYGWIG 137

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             V+  F++ Y G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 138 LIVLVPFISKYFGGLGFSMLAGILVLTIMVLPTITSVSTDAIKSLPWEIREASYALGATR 197

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           WQ    + +P + PG++  +++ ++  +   +A +M++   
Sbjct: 198 WQTIRKVVLPAAKPGILTAVVLGLARAFGEALAVQMVIGNS 238



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 65/158 (41%), Gaps = 9/158 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++F  V  I+I++ + I   I++    +    + +QP  ++    P+ V+  + +  +  
Sbjct: 84  SVFVSVFAILISTPLSISTAIFMVEIAKKFGRNLLQPAMEIFVGIPSVVYGWIGLIVLVP 143

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                +  L  ++   +L++       + +V      + P + +E + +   T W+  R 
Sbjct: 144 FISKYFGGLGFSMLAGILVLTIMVLPTITSVSTDAIKSLPWEIREASYALGATRWQTIRK 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           ++LP   P  +T  +     A+  ++  ++       L
Sbjct: 204 VVLPAAKPGILTAVVLGLARAFGEALAVQMVIGNSPSL 241


>gi|312136497|ref|YP_004003834.1| phosphate abc transporter membrane protein 2, phot family
           [Methanothermus fervidus DSM 2088]
 gi|311224216|gb|ADP77072.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanothermus fervidus DSM 2088]
          Length = 284

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 63/152 (41%), Gaps = 4/152 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   ++ A  + +      A  AA++  +  V+      + +IP + +  F + +F+   
Sbjct: 75  TLTAIIVATPLGVGAAIYLAEYAAETSLI-KVIRFTTQTLAAIPSIVYGLFGLAFFVVF- 132

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +  + L+    +    +  + ++   S+  +P    E S +   + WQ  + + +P 
Sbjct: 133 -CGLGFSLLSGGLVLALMALPTILYTAESSIKAVPESYREASLALGATKWQTIYKVVLPA 191

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           + PG+   +++ M+       A+ M VVG   
Sbjct: 192 AAPGIATGVILGMARA-LEEAAAVMFVVGSAT 222



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFA-------QLLAAFPANVF--FPLVVSCV 441
           + + + A I+  P+G+         +             Q LAA P+ V+  F L    V
Sbjct: 72  IYVTLTAIIVATPLGVGAAIYLAEYAAETSLIKVIRFTTQTLAAIPSIVYGLFGLAFFVV 131

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L   L++       IL+   +   A P  ++E + +   T W+    ++LP 
Sbjct: 132 FCGLGFSLLSGGLVLALMALPTILYTAESSIKAVPESYREASLALGATKWQTIYKVVLPA 191

Query: 502 IFPYYVTGAITACGGA 517
             P   TG I     A
Sbjct: 192 AAPGIATGVILGMARA 207


>gi|241894985|ref|ZP_04782281.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871703|gb|EER75454.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 305

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L A +++  F    A        +R   +L P+ +++  IP + +    L+  V 
Sbjct: 89  SFLVTLIAALVATPFAIGTAVFMTEISPKRGAKILGPVTELLVGIPSVVYGFIGLSVIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++ G   G    A+   F   +  +T     +L ++PR   E + +   + WQ  +
Sbjct: 149 VMRHIFGGSGFGILAGAMVL-FVMILPTVTSMTVDTLKSVPRHYRESALALGATRWQMIY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + +  + PG++  ++  M+  +   +A +M++  
Sbjct: 208 KVILRSATPGILTAVVFGMARAFGEALAVQMVIGN 242



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 60/162 (37%), Gaps = 14/162 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
            ++ +IA+++  P  I              +  + P  +LL   P+ V+  + +S +   
Sbjct: 90  FLVTLIAALVATPFAIGTAVFMTEISPKRGAKILGPVTELLVGIPSVVYGFIGLSVIVPV 149

Query: 443 ----YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
               +      +    +++F      +    +    + P  ++E A +   T W+    +
Sbjct: 150 MRHIFGGSGFGILAGAMVLFVMILPTVTSMTVDTLKSVPRHYRESALALGATRWQMIYKV 209

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           IL    P  +T  +     A+  ++  ++   G+  L   GL
Sbjct: 210 ILRSATPGILTAVVFGMARAFGEALAVQMV-IGNAPLMPKGL 250


>gi|329938095|ref|ZP_08287546.1| permease membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329302584|gb|EGG46474.1| permease membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 288

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 10/228 (4%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            ++++++  +    ++                N      V   +W     +   V+    
Sbjct: 48  WRKLTFLPAVLIAVLLATWLWYRQADLDALTRNALGNGQVSKALWQH---IQLTVISTFF 104

Query: 397 ASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
             II IP+GI +  R     +     FA +  A PA     L+V  +        + +  
Sbjct: 105 VLIIAIPLGILLTRRAFRKATPFAMAFANMGQATPAIGLLALLVIWLGIGRRAALIGIIA 164

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +      +L N IAG  A      E A    ++       + LP   P  + G  TA 
Sbjct: 165 YAVL----PVLSNTIAGLRANDPTLLEAARGIGMSPLGVLTRVELPLAVPLILAGVRTAL 220

Query: 515 GGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                 A++ +     G   L TTG+ +        GS   V L +L+
Sbjct: 221 VLNVGTATLATFGGGGGLGVLITTGITSQRMPVLVLGSVLTVALALLV 268



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 58/183 (31%), Gaps = 10/183 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
                   +  ++  +L          D+  +    L    + +   +     + +    
Sbjct: 46  IGWRKLTFLPAVLIAVLLATWLWYRQADLDALTRNALGNGQVSKALWQHIQLTVISTFFV 105

Query: 80  LLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           L+       L  +   R+     +   ++ Q+ P +G L   V++        +IG    
Sbjct: 106 LIIAIPLGILLTRRAFRKATPFAMAFANMGQATPAIGLLALLVIWLGIGRRAALIGIIAY 165

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+  + +        +    L      L E +R   +S       + +P ++P ++  + 
Sbjct: 166 AVLPVLS--------NTIAGLRANDPTLLEAARGIGMSPLGVLTRVELPLAVPLILAGVR 217

Query: 198 MSM 200
            ++
Sbjct: 218 TAL 220


>gi|153007656|ref|YP_001368871.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559544|gb|ABS13042.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 292

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 7/206 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFT 119
             Y   + +  +++ +I+L+         A+ R  G     + L + +S+P +   L   
Sbjct: 83  WDYFRNSLIISVTSTIIALIVGVSGGYAFARFRFWGKSTTFLGLMLTRSVPGIALSLPLF 142

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++Y          G  +  +       +W +          +P+DL E ++    + WQ 
Sbjct: 143 MLYSRIGIIDTHFGLIVTYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQA 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +        LP +G     A    D  
Sbjct: 199 FWQVEFPLAGPGIATAGIFAFLTSWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDWR 257

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIV 265
            +    + M+        ++ + ++ 
Sbjct: 258 GMCALAVVMIIPALTLTFIVQKHLVA 283



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 5/197 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSY 443
           ++   V   IIA I+ +  G                  +L  + P      PL +     
Sbjct: 89  SLIISVTSTIIALIVGVSGGYAFARFRFWGKSTTFLGLMLTRSVPGIALSLPLFMLYSRI 148

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++ +  L +  +     + ++ +       P D  E A     T W+ +  +  P   
Sbjct: 149 GIIDTHFGLIVTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAG 208

Query: 504 PYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   T  I A   +WN  ++ S++    +      GL  Y AE T    +  +    ++M
Sbjct: 209 PGIATAGIFAFLTSWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVM 266

Query: 563 CCFVLALNRFLWHPLYL 579
               L L   +   L  
Sbjct: 267 IIPALTLTFIVQKHLVA 283


>gi|291302631|ref|YP_003513909.1| binding-protein-dependent transporter inner membrane component
           [Stackebrandtia nassauensis DSM 44728]
 gi|290571851|gb|ADD44816.1| binding-protein-dependent transport systems inner membrane
           component [Stackebrandtia nassauensis DSM 44728]
          Length = 215

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++ASII + + +    +P ++      A ++   P+   F L++           
Sbjct: 25  VFQCVLLASIIGLGLAVASYRKPWLAGVTTGTASVIFTIPSLALFGLMIPLFGLGVAPSV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G      +  + A    +        + LP  +P  +TG
Sbjct: 85  VALTLYAML----PIVRNAIVGLQGVDKNMVDAARGMGMGRMAILFRVELPLAWPVVLTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCF 565
              +   A     ++  AS         GLG  I    A      +  +VV G L +   
Sbjct: 141 IRVSTQLAVGVGAIAAYASG-------PGLGEQIFSGLARLGGANAINQVVAGTLGIVIL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 61/201 (30%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L     +    +   ++++ +     A  + +   L  V      ++ +IP L     
Sbjct: 12  GQLAFEFYQHASMVFQCVLLASIIGLGLAVASYRKPWLAGVTTGTASVIFTIPSLALFGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F              ++ A+    +  +  +    L  + +++ + +R   +    
Sbjct: 72  MIPLFGLGV--------APSVVALTLYAMLPIVRNAIVGLQGVDKNMVDAARGMGMGRMA 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P + P ++  + +S          +            PG+G  I   +     
Sbjct: 124 ILFRVELPLAWPVVLTGIRVSTQLAVGVGAIAAYASG-------PGLGEQIFSGLARLGG 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              +  ++     I +   L 
Sbjct: 177 ANAINQVVAGTLGIVILALLF 197


>gi|297623165|ref|YP_003704599.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297164345|gb|ADI14056.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 615

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 10/184 (5%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT---QW 462
           +       +   + P+A      P     P+++  +    +     L    + G     +
Sbjct: 437 VVFVLVRPLERALMPWAVASQTVPIIALVPVLLLVLGNAGITIQTSLLPTALIGAYIAFF 496

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            ++   + G  +      ++  S+  + W+ +  +  P   P        A   A   ++
Sbjct: 497 PVVVGTVQGLRSVDPLALDLMRSYAASPWQVFTKVRFPAAVPSLFVSLKLATAAALVGAL 556

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW--HPLYLY 580
           V+E  S         GLG  I    + G+  +V + +LI     + L  F+     L   
Sbjct: 557 VAETESNNRR-----GLGFQILGQVQSGNVADVWILLLISALLGITLVAFVGLVQRLVAP 611

Query: 581 GTRC 584
             R 
Sbjct: 612 WERR 615



 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 9/179 (5%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L   L+P     Q++PI+  +   ++   N            A+   + +  + +   
Sbjct: 443 RPLERALMPWAVASQTVPIIALVPVLLLVLGNAGITIQTSLLPTALIGAYIA-FFPVVVG 501

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
             Q L ++     ++ RS+  S WQ F  +  P ++P L  ++ ++ +      + +E  
Sbjct: 502 TVQGLRSVDPLALDLMRSYAASPWQVFTKVRFPAAVPSLFVSLKLATAAALVGALVAE-- 559

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT---MLGVIFLYDQLLFRPMIVWSNK 269
                     G+G  I   ++  ++  +   +L    +   +  +  L+ R +  W  +
Sbjct: 560 ---TESNNRRGLGFQILGQVQSGNVADVWILLLISALLGITLVAFVGLVQRLVAPWERR 615


>gi|326391593|ref|ZP_08213123.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325992375|gb|EGD50837.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 299

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 77/165 (46%), Gaps = 5/165 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   + L    A++IS       A      + +    +L P ++I   IP +  G++ 
Sbjct: 76  LQFIIGSILVSAFAIMISAPLGVSSAIFMVEIEKKLGQKILQPAIEIFVGIPSVVYGWVG 135

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 136 LTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIRSLPVEIREASYALGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           WQ   ++ +P +  G++  +++ ++  +   +A +M++    VIP
Sbjct: 196 WQTIRHVVIPAAKSGILTAIILGLARAFGEALAVQMVIGNRPVIP 240



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 63/171 (36%), Gaps = 17/171 (9%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHI----------SSKIQPFAQLLAAFPANVF 433
            +   + ++  I+ S   I +   +G    I             +QP  ++    P+ V+
Sbjct: 72  AVGSLQFIIGSILVSAFAIMISAPLGVSSAIFMVEIEKKLGQKILQPAIEIFVGIPSVVY 131

Query: 434 FPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
             + ++ +       +  L  +L   +L++       + +V      + P + +E + + 
Sbjct: 132 GWVGLTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIRSLPVEIREASYAL 191

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T W+  R++++P      +T  I     A+  ++  ++       +  +
Sbjct: 192 GATRWQTIRHVVIPAAKSGILTAIILGLARAFGEALAVQMVIGNRPVIPKS 242


>gi|313899642|ref|ZP_07833148.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312955563|gb|EFR37225.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 241

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 71/170 (41%), Gaps = 9/170 (5%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D++ ++   L   +  Q    T LR    ++ + +     A L+ +      +  PIL
Sbjct: 33  PLDVLKLMGAQLQSAAFYQSTLVTLLRSWGGLLAAFVMAGGCAFLSYRMPAFHDLFYPIL 92

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            + +S+P + ++   +++F         G+E +A    F      +  S+Y  L ++  +
Sbjct: 93  LLTRSVPNISYIIVILLWF---------GSESSAAIVSFLIIFPTIYSSLYSGLQHMDEN 143

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
           L+ V + +  S W     + +P     +  ++   +S  +   V SE++ 
Sbjct: 144 LKRVVQLYPESRWYLLRRVYLPLLSSSIQASLSNGISLTFKVGVMSEIMG 193



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 10/176 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R    ++ A ++           P       P   L  + P   +  +++     
Sbjct: 54  LVTLLRSWGGLLAAFVMAGGCAFLSYRMPAFHDLFYPILLLTRSVPNISYIIVILLWFG- 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +S L+IF T +  L++   G      + K V   +  + W   R + LP + 
Sbjct: 113 -SESSAAIVSFLIIFPTIYSSLYS---GLQHMDENLKRVVQLYPESRWYLLRRVYLPLLS 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                         +   ++SE+           G+G  +           V    
Sbjct: 169 SSIQASLSNGISLTFKVGVMSEIMG-----QVPMGIGRQMNLCRLTSDMTGVFAWT 219


>gi|238925301|ref|YP_002938818.1| phosphate ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|238876977|gb|ACR76684.1| phosphate ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
          Length = 287

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQD--VLYVIWLGCITMFRVVVLIIIASIIWIPV 404
               ++ G+ I +  + IG +   F   +  VL         +   + +III  +I  PV
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFMTSETSVLRGTVGIAGNLLNTLYIIIITMLIATPV 85

Query: 405 GIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLL 455
           G+              + S I+   + LA  P+ +F    +             L  SL 
Sbjct: 86  GVGAAVYLNEYAKPGKLVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGYSILTGSLT 145

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I  N        P+ ++  A       W   R I+LP   P  +TG I A G
Sbjct: 146 LTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVILAIG 205

Query: 516 GAWN--ASIVSEVASWGHIHLRTTGLGAYIAE------------STEKGSFPEVVLGVLI 561
                 A+++    S G +    +G  + I +            +T +G F +     ++
Sbjct: 206 RIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLAATSEGKFDQAFGIAVV 265

Query: 562 MCCFVLALNRF 572
           +   V  +N  
Sbjct: 266 LLVIVFLINIL 276



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 86/255 (33%), Gaps = 22/255 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +L   II + + GI +        +   +   V  +      T   ++  M+I+  
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFMTSETSVLRGTVG-IAGNLLNTLYIIIITMLIATP 84

Query: 82  FTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A    +  + G ++  I    + +  IP + F  F +++F          + L  
Sbjct: 85  VGVGAAVYLNEYAKPGKLVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGY--SILTG 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +T +  ++L  +P      +       W     + +P +MPG++  +++
Sbjct: 143 SLTLTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVIL 202

Query: 199 SMS---------------GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
           ++                 G    VAS              I  Y+A A  E        
Sbjct: 203 AIGRIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLA-ATSEGKFDQAFG 261

Query: 244 AMLTMLGVIFLYDQL 258
             + +L ++FL + L
Sbjct: 262 IAVVLLVIVFLINIL 276


>gi|165976332|ref|YP_001651925.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307245825|ref|ZP_07527911.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247901|ref|ZP_07529936.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307250155|ref|ZP_07532115.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252538|ref|ZP_07534434.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307254798|ref|ZP_07536625.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259239|ref|ZP_07540969.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|165876433|gb|ABY69481.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|306853527|gb|EFM85746.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855592|gb|EFM87760.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306857820|gb|EFM89916.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306860130|gb|EFM92147.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306862324|gb|EFM94291.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866906|gb|EFM98764.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 225

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  I++I +S+P    L
Sbjct: 21  TLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVIINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVSKFYLPESLPILINGITLTL 162



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 14/212 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    V      T++      ++A ++ +P+G          I   P + 
Sbjct: 2   WDSFMQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVIINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P    E A S   T W+      LP   P  + G           S ++     G 
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVSKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGG 179

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +       G +      K     +++ ++++ 
Sbjct: 180 LGNLAISYGEHRNMVYVKWISTIIIVAIVMIS 211


>gi|323359397|ref|YP_004225793.1| glycine/betaine ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323275768|dbj|BAJ75913.1| ABC-type proline/glycine betaine transport systems, permease
           component [Microbacterium testaceum StLB037]
          Length = 252

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +      L  + ++V++             + +     V I    ++IP  G      
Sbjct: 22  LGRALGVQLLYTVISVVVAGAIAIPLGWFIGHTGKGRETAVAISGAARAIPSFG------ 75

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  +      V+    AA+ +     + ++    Y  L  I R + +  RS  ++  Q F
Sbjct: 76  LLILLTLLLGVLHKPEAAVISFVILAIPSLLAGAYTGLEAIDRRVIDAGRSMGMTEMQIF 135

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + VP  +P L+  +  +       V  +  I +G       G+G YI  AI  +    
Sbjct: 136 WRIEVPLGLPLLIGGIRAATLQVLATVTIAAYIGLG-------GLGQYIIAAIPLRRFDM 188

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           ++   + +  +  + D L 
Sbjct: 189 LIGGAILVAVLALVTDGLF 207



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 9/190 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            + +   V+ +++A  I IP+G +IG            +    A P+     L+   +  
Sbjct: 27  GVQLLYTVISVVVAGAIAIPLGWFIGHTGKGRETAVAISGAARAIPSFGLLILLTLLLGV 86

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            H      +S +++      +L     G  A      +   S  +T  + +  I +P   
Sbjct: 87  LHKPEAAVISFVIL--AIPSLLAGAYTGLEAIDRRVIDAGRSMGMTEMQIFWRIEVPLGL 144

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  + G   A         ++     G       GLG YI  +     F  ++ G +++ 
Sbjct: 145 PLLIGGIRAATLQVLATVTIAAYIGLG-------GLGQYIIAAIPLRRFDMLIGGAILVA 197

Query: 564 CFVLALNRFL 573
              L  +   
Sbjct: 198 VLALVTDGLF 207


>gi|153852893|ref|ZP_01994330.1| hypothetical protein DORLON_00312 [Dorea longicatena DSM 13814]
 gi|149754535|gb|EDM64466.1| hypothetical protein DORLON_00312 [Dorea longicatena DSM 13814]
          Length = 287

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 71/177 (40%), Gaps = 3/177 (1%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84
           VL+  I+ +++HG+         +        +  +L      T L +L A+   +    
Sbjct: 38  VLIFLIVYVVVHGVPYLKPSIFSLHYTSENASLMPALINTVIMTFLSLLIAVPFGIFSAI 97

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A +  +   V+    + +Q IP + +  F +++F+         + LA  F +  
Sbjct: 98  FLVEYAKRGNKFVEVIRLTTETLQGIPSIVYGLFGMLFFVTTCGWGF--SILAGAFTLAI 155

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +  +  S  ++L  +P    E S        +  + + +P ++PG++  +++++ 
Sbjct: 156 MVLPLIMRSTEEALKAVPDSYREGSFGLGAGKLRTVFRIVLPSAVPGILAGVILAIG 212



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 10/180 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I  F V+  + + +    + Y+                   +   V++  ++ +I +P G
Sbjct: 33  ILTFAVLIFLIVYVVVHGVPYLKPSIFSLHYTSENASLMPALINTVIMTFLSLLIAVPFG 92

Query: 406 IWIGFR-----PHISSKIQPF---AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
           I+            +  ++      + L   P+ V+  F ++    +       L  +  
Sbjct: 93  IFSAIFLVEYAKRGNKFVEVIRLTTETLQGIPSIVYGLFGMLFFVTTCGWGFSILAGAFT 152

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I+ +      A P+ ++E +        R    I+LP   P  + G I A G
Sbjct: 153 LAIMVLPLIMRSTEEALKAVPDSYREGSFGLGAGKLRTVFRIVLPSAVPGILAGVILAIG 212


>gi|124009229|ref|ZP_01693910.1| phosphate ABC transporter, permease protein PstA [Microscilla
           marina ATCC 23134]
 gi|123985214|gb|EAY25148.1| phosphate ABC transporter, permease protein PstA [Microscilla
           marina ATCC 23134]
          Length = 285

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + ++ + +++     +        A        +  + + +  IP + F  F + +F+
Sbjct: 67  TLILIVGSGLVAFPMGILAGIFMNEYAHQNWFKKFVRLMTNNLAGIPSIVFGLFGMAFFV 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N     V          +    +  +  +  +SL  IP D    S +   S WQ  W + 
Sbjct: 127 NGLGFGVSILSGCLTLGVLILPI--IIRTTEESLKFIPDDYRLASYALGASKWQTIWRVI 184

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++P +V  +++++ 
Sbjct: 185 LPAALPNVVTGVILAVG 201



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 15/185 (8%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT------MFRVVVLIIIASI 399
           +    +V  ++IG+ +      ++  ++     V   G         +   ++LI+ + +
Sbjct: 17  MVITVLVGAISIGVFFYIFFNGISVLSWGFFTGVPENGMTEGGIFPAIMGTLILIVGSGL 76

Query: 400 IWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           +  P+GI  G        +      ++     LA  P+ VF    ++            L
Sbjct: 77  VAFPMGILAGIFMNEYAHQNWFKKFVRLMTNNLAGIPSIVFGLFGMAFFVNGLGFGVSIL 136

Query: 453 SLLMIFGT-QWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           S  +  G     I+           P+D++  + +   + W+    +ILP   P  VTG 
Sbjct: 137 SGCLTLGVLILPIIIRTTEESLKFIPDDYRLASYALGASKWQTIWRVILPAALPNVVTGV 196

Query: 511 ITACG 515
           I A G
Sbjct: 197 ILAVG 201


>gi|320322123|gb|EFW78219.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320330777|gb|EFW86751.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330871990|gb|EGH06139.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 214

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 10/168 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGAFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           ++     W   W++ +P + PG+V    +++         +  I VG 
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITLVTMINSSAMAGAIGVGG 168



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 10/166 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           +++LP   P  V G         N+S ++     G +       G 
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSSAMAGAIGVGGLGDIAYRYGY 178


>gi|291524405|emb|CBK89992.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Eubacterium rectale DSM 17629]
          Length = 287

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 25/251 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQD--VLYVIWLGCITMFRVVVLIIIASIIWIPV 404
               ++ G+ I +  + IG +   F   +  VL         +   + +III  +I  PV
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFLTSETSVLRDTVGIAGNLLNTLYIIIITMLIATPV 85

Query: 405 GIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLL 455
           G+                S I+   + LA  P+ +F    +             L  SL 
Sbjct: 86  GVGAAVYLNEYAKPGKFVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGYSILTGSLT 145

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I  N        P+ ++  A       W   R I+LP   P  +TG I A G
Sbjct: 146 LTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVILAIG 205

Query: 516 GAWN--ASIVSEVASWGHIHLRTTGLGAYIAE------------STEKGSFPEVVLGVLI 561
                 A+++    S G +    +G  + I +            +T +G F +     ++
Sbjct: 206 RIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLAATSEGKFDQAFGIAVV 265

Query: 562 MCCFVLALNRF 572
           +   V  +N  
Sbjct: 266 LLVIVFLINIL 276



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 21/254 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L+ VL+ GII  +          + +     +  D   +      T   ++  M+I+   
Sbjct: 26  LSVVLLAGIIIYVFVRGIGQVNWQFLTSETSVLRDTVGIAGNLLNTLYIIIITMLIATPV 85

Query: 83  TFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A    +  + G  +  I    + +  IP + F  F +++F          + L   
Sbjct: 86  GVGAAVYLNEYAKPGKFVSTIEFATETLAGIPSIIFGLFGMMFFGQTIGFGY--SILTGS 143

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P      +       W     + +P +MPG++  ++++
Sbjct: 144 LTLTLMVLPLITRNTQEALKTVPDSYRHGAVGLGAGKWHTIRTILLPSAMPGIITGVILA 203

Query: 200 MS---------------GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +                 G    VAS              I  Y+A A  E         
Sbjct: 204 IGRIVGESAALLFTAGSAGMLPKVASGYFSKIMQSGGTLTIKLYLA-ATSEGKFDQAFGI 262

Query: 245 MLTMLGVIFLYDQL 258
            + +L ++FL + L
Sbjct: 263 AVVLLVIVFLINIL 276


>gi|88855060|ref|ZP_01129725.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815588|gb|EAR25445.1| ABC-type glycine betaine transport, permease protein [marine
           actinobacterium PHSC20C1]
          Length = 227

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 71/181 (39%), Gaps = 12/181 (6%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +V+  L +      A + +    +L+ +  ++ +IP L             +      +E
Sbjct: 26  IVLGFLISIPLGWFAYRFKLTRGILLTVAGLLYTIPSLALFVILPPLLGISF-----LSE 80

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L    A+    V  M  S+  +L ++   + + + +    GW++FW +  P + P ++  
Sbjct: 81  LNITIALTLYAVAIMARSVADALASVDPAIRQSATAVGFGGWRRFWTVDFPLAGPVVLAG 140

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++       V    ++ VG  +I +  +G       + + +  I   ++  + V  L 
Sbjct: 141 LRVA------AVSTVSLVTVG-ILIGVESLGYLFTNGFQRRIIEEIFAGVVMTVVVALLI 193

Query: 256 D 256
           D
Sbjct: 194 D 194



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 64/177 (36%), Gaps = 8/177 (4%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I++  +I IP+G +          +   A LL   P+   F ++   +    L+  L ++
Sbjct: 26  IVLGFLISIPLGWFAYRFKLTRGILLTVAGLLYTIPSLALFVILPPLLGISFLS-ELNIT 84

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       +  +V    ++     ++ A++    GWR +  +  P   P  + G   A
Sbjct: 85  IALTLYAVAIMARSVADALASVDPAIRQSATAVGFGGWRRFWTVDFPLAGPVVLAGLRVA 144

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   + +       I +    LG       ++    E+  GV++     L ++
Sbjct: 145 A-------VSTVSLVTVGILIGVESLGYLFTNGFQRRIIEEIFAGVVMTVVVALLID 194


>gi|146296628|ref|YP_001180399.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410204|gb|ABP67208.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 217

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  +  L     +T   ++ +  I+ +       L          ++  L  +L  I++
Sbjct: 1   MSETLQLLLVSTWQTIYMVVISTFIATVLGIPLGVLLMVTDKGQILQNSTLNRILSTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +SIP    L   ++ F  L  G  IG   AAI  +  + +  M      +L  + R +
Sbjct: 61  IFRSIP-FVILLIVLMPFTRLIVGTSIGTT-AAIVPLSVAAIPFMGRLTETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E +++   S +Q    + +P ++P +V  + ++
Sbjct: 119 IEAAQAMGASPFQIVIKVLIPEALPSIVSGITIT 152



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 12/150 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VV+   IA+++ IP+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVISTFIATVLGIPLGVLLMVTDKGQILQNSTLNRILSTIVNIFRSIPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++  +  ++  +   I F                 E A +   + ++  
Sbjct: 74  LMPFTRLIVGTSIGTTAAIVPLSVAAIPFMGRLTETALREVDRGVIEAAQAMGASPFQIV 133

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
             +++P   P  V+G           S ++
Sbjct: 134 IKVLIPEALPSIVSGITITAINLIGYSAMA 163


>gi|332711784|ref|ZP_08431715.1| phosphate ABC transporter, PhoT family TC 3.A.1.7.1, membrane
           protein 2 [Lyngbya majuscula 3L]
 gi|332349762|gb|EGJ29371.1| phosphate ABC transporter, PhoT family TC 3.A.1.7.1, membrane
           protein 2 [Lyngbya majuscula 3L]
          Length = 318

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           T L +   M +S+      A L A+        G ++   LD++  +P + F  F   +F
Sbjct: 89  TVLILGVCMTVSIPIGVGTAILLAEFTDTKSIFGRLVRRSLDVLAGVPSIVFGLFGNAFF 148

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  +  + L+    +    +  +  S  +    +  D    + +  LS     W L
Sbjct: 149 CKTL--GLGFSILSGGLTLACMVLPILIRSTEEGFRAVSDDYRLSATALGLSRTTTLWNL 206

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +P + PGLV  +++ +        A+ +   G
Sbjct: 207 LLPAAAPGLVVGLVLGIGRA-IAETAALIFTSG 238



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 12/190 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIA 397
           + + + +F   V   +   I W  +G I   F           G I   +   V+++ + 
Sbjct: 37  MIWAIALFVTAVFLWILSDIVWHGVGQINWEFLTTAPKNAGREGGIGPILVSTVLILGVC 96

Query: 398 SIIWIPVGI--------WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV-SYYHLNP 448
             + IP+G+        +   +      ++    +LA  P+ VF     +       L  
Sbjct: 97  MTVSIPIGVGTAILLAEFTDTKSIFGRLVRRSLDVLAGVPSIVFGLFGNAFFCKTLGLGF 156

Query: 449 NLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++    L +      IL  +   G  A  +D++  A++  ++       ++LP   P  V
Sbjct: 157 SILSGGLTLACMVLPILIRSTEEGFRAVSDDYRLSATALGLSRTTTLWNLLLPAAAPGLV 216

Query: 508 TGAITACGGA 517
            G +   G A
Sbjct: 217 VGLVLGIGRA 226


>gi|319782806|ref|YP_004142282.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168694|gb|ADV12232.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 384

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 15/277 (5%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV--CGVA 356
           G +   +F  L+       R + V+    P       + + +   +   W  ++      
Sbjct: 96  GLARTPYFLLLTAAWLLGWRCVAVLSSLRPFAKWARTALRLIIPAIFGAWILIIWEAVTR 155

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG----FRP 412
                  +    +    +    +  LG      +   +I   ++    G          P
Sbjct: 156 GAGIPFILLPPPSAIGARIAGSLPVLGADVRQTIFKAVIFGYVVGSGAGFITAVLADRVP 215

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
            +   + P   +++A P     P++V    +   +     + ++I  T + +L N +AG 
Sbjct: 216 FLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSK----AAVVIIMTFFPMLVNTVAGL 271

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           +A  +  +++  ++    W     + LP   P+           A   +IV+E       
Sbjct: 272 AASGHMERDLMRTYASGYWPTLLKLRLPAAAPFIFNALKINSTLALIGAIVAEFFG---- 327

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G+G  I+    + +   V   + +        
Sbjct: 328 -TPVVGMGFRISTEVGRMNIDMVWAEIAVAALAGSVF 363



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 19/263 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R I P IF     ++   +             P  I   +  +L V  L     +T  + 
Sbjct: 135 RLIIPAIFGAWILIIWEAVTRGAGIPFILLPPPSAIGARIAGSLPV--LGADVRQTIFKA 192

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           ++   V+     F+ A LA +   L   L+PI +++ ++PI+G     V++F   +  K 
Sbjct: 193 VIFGYVVGSGAGFITAVLADRVPFLRRGLLPIGNMVSALPIIGVAPIMVMWFGFDWQSKA 252

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  +    L        ++ R++    W     L +P + P 
Sbjct: 253 A--------VVIIMTFFPMLVNTVAGLAASGHMERDLMRTYASGYWPTLLKLRLPAAAPF 304

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL---AILYAMLTM 248
           +   + ++ +      + +E         P+ G+G  I+  +   ++    A +      
Sbjct: 305 IFNALKINSTLALIGAIVAEFFGT-----PVVGMGFRISTEVGRMNIDMVWAEIAVAALA 359

Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271
             V +    L+ R +  W    R
Sbjct: 360 GSVFYGVVALVERAVTFWHPSVR 382


>gi|255318238|ref|ZP_05359476.1| phosphonate ABC transporter, permease protein PhnE [Acinetobacter
           radioresistens SK82]
 gi|293609946|ref|ZP_06692248.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|255304710|gb|EET83889.1| phosphonate ABC transporter, permease protein PhnE [Acinetobacter
           radioresistens SK82]
 gi|292828398|gb|EFF86761.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 265

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 19/197 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVV 121
             T    ++   I++L +     LAA++      +      +L++++S+P L      V 
Sbjct: 75  LDTLAMSIAGTAIAVLLSVPLGILAARNTSPHPAVYQAARALLNVLRSVPELIMGIVFVA 134

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                    V+   L +I  I             +++ +  +   E +++   S  Q  +
Sbjct: 135 AVGFGALPGVLALGLHSIGMIAKF--------FAEAIEHTDQAPVEAAQAAGCSPLQVIF 186

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           +   P  +P +    +      +       M+  G       GIG  +  +++      +
Sbjct: 187 HGIFPQVLPQMADTAIYRWEYNFRASTVMGMVGAG-------GIGFELIGSLRLMQYQEV 239

Query: 242 LYAMLTMLGVIFLYDQL 258
              +L +LG++ L D  
Sbjct: 240 SAILLVILGMVTLVDTF 256



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAF 428
           + +    +     T+   +    IA ++ +P+GI         P +    +    +L + 
Sbjct: 64  FSEWRAWVKPVLDTLAMSIAGTAIAVLLSVPLGILAARNTSPHPAVYQAARALLNVLRSV 123

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           P  +   + V+ V +  L   L L L  + +    +                  E A + 
Sbjct: 124 PELIMGIVFVAAVGFGALPGVLALGLHSIGMIAKFF------AEAIEHTDQAPVEAAQAA 177

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +   + I P + P     AI      + AS V  +   G       G+G  +  S
Sbjct: 178 GCSPLQVIFHGIFPQVLPQMADTAIYRWEYNFRASTVMGMVGAG-------GIGFELIGS 230

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
                + EV   +L++   V  ++ F
Sbjct: 231 LRLMQYQEVSAILLVILGMVTLVDTF 256


>gi|258404897|ref|YP_003197639.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
 gi|257797124|gb|ACV68061.1| binding-protein-dependent transport systems inner membrane
           component [Desulfohalobium retbaense DSM 5692]
          Length = 245

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 86/240 (35%), Gaps = 27/240 (11%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+A +L +G++   +  I+  + P +   IV +            +    +  +M ++ 
Sbjct: 12  GLIALLLTLGVVAERVGLIEYLSDPYEYPYIVKL----------LYQHLYLVGVSMALAT 61

Query: 81  LFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
               +      + R  R   V++ I+ + Q+IP L  L   +                 A
Sbjct: 62  GLGLLIGIALTRRRLRRFAGVVMYIVSLGQTIPSLAVLALMMSVLGIGSR--------TA 113

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           IFA+F   +  +  +    + ++   + + ++   +  W+    + +P +M  ++    +
Sbjct: 114 IFALFVYSILPIARNTLAGITSVSPAMIDAAKGMGMPDWRILLEVELPNAMTVILTGFRV 173

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +       +V +        +I   G+G  I   I       +L   +    +  L D L
Sbjct: 174 A-------LVINIGTTALAYLIGAGGLGDLIFTGINLMQTEKLLAGAIPTTLLALLGDFL 226



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 13/221 (5%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
            +   + +G+  + +G I       +  Y++ L    ++ V V + +A+ + + +GI + 
Sbjct: 13  LIALLLTLGVVAERVGLIEYLSDPYEYPYIVKLLYQHLYLVGVSMALATGLGLLIGIALT 72

Query: 410 FRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
            R     +  +     L    P+     L++S +              +   +   I  N
Sbjct: 73  RRRLRRFAGVVMYIVSLGQTIPSLAVLALMMSVLGIGSRT----AIFALFVYSILPIARN 128

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            +AG ++      + A    +  WR    + LP      +TG   A       + ++ + 
Sbjct: 129 TLAGITSVSPAMIDAAKGMGMPDWRILLEVELPNAMTVILTGFRVALVINIGTTALAYLI 188

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             G       GLG  I          +++ G +      L 
Sbjct: 189 GAG-------GLGDLIFTGINLMQTEKLLAGAIPTTLLALL 222


>gi|164687398|ref|ZP_02211426.1| hypothetical protein CLOBAR_01039 [Clostridium bartlettii DSM
           16795]
 gi|164603172|gb|EDQ96637.1| hypothetical protein CLOBAR_01039 [Clostridium bartlettii DSM
           16795]
          Length = 291

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 82/202 (40%), Gaps = 17/202 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILD-----IMQSIPILGFL-- 116
           R+ +    + V+ L+  +  A + +K   SRR  ++L+ IL      ++++      L  
Sbjct: 73  RSLVLAFISTVLCLIVGYPTAYIISKAKPSRRATLLLLCILPMWMNFLLRTYAWSAILGK 132

Query: 117 ---TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                T++  + L P  ++  + A +  +  + +  M   ++  L  + +DL   ++   
Sbjct: 133 NGFINTLLGMVGLGPINILYTDAAVLLGMVYNFLPFMILPIHTILSKMDQDLINAAKDLG 192

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            + +Q F  +  P S+PG++  + M         V S+++  G   +    IG+ I    
Sbjct: 193 ANNFQVFTKVIFPLSLPGVISGITMVFMPAVSTFVISKLLGGGQFYL----IGNLIEQEF 248

Query: 234 KEQDLLAILYAMLTMLGVIFLY 255
                     A+   + +I L 
Sbjct: 249 MSVGDWHFGSAISIFMMIIILI 270



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 5/95 (5%)

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D    A       ++ +  +I P   P  ++G       A +  ++S++   G  +L
Sbjct: 180 MDQDLINAAKDLGANNFQVFTKVIFPLSLPGVISGITMVFMPAVSTFVISKLLGGGQFYL 239

Query: 535 RTTGLGAYIAESTEK-GSFPEVVLGVLIMCCFVLA 568
               +G  I +     G +       + M   +L 
Sbjct: 240 ----IGNLIEQEFMSVGDWHFGSAISIFMMIIILI 270


>gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
 gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
          Length = 483

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 59/137 (43%), Gaps = 2/137 (1%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPI 112
           I  +   L +   RT L  ++A +I+ +   ++   +A  ++ L  +    +DI++ IP+
Sbjct: 273 IQQNGGELLKGLGRTLLLTITAFIIATILGVIFGLFSASPNKVLNWIATIYVDILRGIPL 332

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +  L F + + +  +    I A LA +  +  +    +   +   +  +     E SRS 
Sbjct: 333 IV-LAFFIYFSIPQFLNIQIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNGQLEASRSL 391

Query: 173 RLSGWQKFWYLGVPFSM 189
            L+       + +P ++
Sbjct: 392 GLTYNTSMRKVVLPQAV 408



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 24/199 (12%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGF-----RPHISSKIQPFAQLLAAFP--ANVFFP- 435
              + R ++L I A II   +G+  G         ++     +  +L   P     FF  
Sbjct: 281 LKGLGRTLLLTITAFIIATILGVIFGLFSASPNKVLNWIATIYVDILRGIPLIVLAFFIY 340

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             +       +   L   + +   T  YI   V  G  A  N   E + S  +T     R
Sbjct: 341 FSIPQFLNIQIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNGQLEASRSLGLTYNTSMR 400

Query: 496 YIILPGI----FPYYVTGAITACGGAWNASIVS--EVASWGHIHLRTTGLGAYIAESTEK 549
            ++LP       P ++   +         S++   E+   G I          IA +   
Sbjct: 401 KVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKII---------IARTYSS 451

Query: 550 GSFPEVVLGVLIMCCFVLA 568
           G    +++G++ +    + 
Sbjct: 452 GDM-WLIVGLMYIIIITIL 469


>gi|315655081|ref|ZP_07907983.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315490562|gb|EFU80185.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
          Length = 356

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 65/172 (37%), Gaps = 5/172 (2%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           ++ I+        +     D V ++     +      T   +  ++++S+          
Sbjct: 41  LLLIVALAAYIMVLGLLSFDPVFLSFSRDGIMNQVFNTVYLVFLSLIVSVALGVPAGIYM 100

Query: 91  AKSRRLGM---VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           A+          +   ++ + S+P +    F  + F+ +   +     LA   A+    +
Sbjct: 101 AEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNL--LAGALAVSILNL 158

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +T S   +L  +P DL+  S +   + W     + +P ++P L+  ++++
Sbjct: 159 PLVTTSTESALRALPSDLKYGSAALGATHWTTIVRVQLPAALPHLMTGVVLA 210



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 5/173 (2%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
           F+  ++  +A  I    +      F       ++     T++ V + +I++  + +P GI
Sbjct: 39  FFLLLIVALAAYIMVLGLLSFDPVFLSFSRDGIMNQVFNTVYLVFLSLIVSVALGVPAGI 98

Query: 407 WIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           ++         +  I+   + L++ P+ V   F  +V  +        L  +L +     
Sbjct: 99  YMAEYAPENRWTGFIRISIESLSSLPSIVVGLFGYLVFILMVGQQWNLLAGALAVSILNL 158

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +  +  +   A P+D K  +++   T W     + LP   P+ +TG + A 
Sbjct: 159 PLVTTSTESALRALPSDLKYGSAALGATHWTTIVRVQLPAALPHLMTGVVLAA 211


>gi|254695020|ref|ZP_05156848.1| maltose transport system permease protein MALG [Brucella abortus
           bv. 3 str. Tulya]
          Length = 259

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 9/195 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTFTVVYFMNLYPG 129
           +++ V+SL+         A+ R  G      L  M  +S+P +   L   +VY       
Sbjct: 61  VTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPLFMVYSRIGIID 119

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
              G  L  +        W +          +P+DL E ++    + WQ FW +  P + 
Sbjct: 120 THFGLILTYVALNIPFTTWLIDGFF----RQVPKDLAEAAQIDGCTRWQAFWQVEFPLAG 175

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG+    + +    W     +  +        LP +G     A    D   +    + M+
Sbjct: 176 PGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDWRGMCALAVVMI 234

Query: 250 GVIFLYDQLLFRPMI 264
                   ++ + ++
Sbjct: 235 VPALALTFVIQKHLV 249



 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 19/189 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 61  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 120

Query: 449 NLWLSLLMIFGTQWYILFNV------IAGA-SAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +  L L        Y+  N+      I G     P D  E A     T W+ +  +  P 
Sbjct: 121 HFGLILT-------YVALNIPFTTWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPL 173

Query: 502 IFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
             P   +  I A    WN  ++ S++    +      GL  Y AE T    +  +    +
Sbjct: 174 AGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAV 231

Query: 561 IMCCFVLAL 569
           +M    LAL
Sbjct: 232 VMIVPALAL 240


>gi|238027434|ref|YP_002911665.1| putative ABC transport system, membrane protein [Burkholderia
           glumae BGR1]
 gi|237876628|gb|ACR28961.1| Putative ABC transport system, membrane protein [Burkholderia
           glumae BGR1]
          Length = 280

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  +           P   D  SL          + ++ +I  L          +    
Sbjct: 51  PGWLQPLFAPLAEHGAPAIYDRASLIDLTLSHLALVAASSLIGSLAAIAAGIAVTRPAGA 110

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V   I ++ Q+ P +  L   V          ++   L  +  +F         S 
Sbjct: 111 DFLPVARSIANLGQTFPPVAVLALAVPAVGFGAAPVLLALTLYGLLPVFE--------ST 162

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L  IP    + +R   +S  Q+   + +P +MP +V  + ++       V+      
Sbjct: 163 LAGLGAIPAATLDAARGMGMSARQRLVSIELPLAMPVIVNGVRLA------AVINLGTAT 216

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G T +   G+G  I   ++  +   +L   + +  +  L    L
Sbjct: 217 IGST-VAARGLGDVIIAGLQTSNTAFVLQGGVIVALLAVLLYDAL 260



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPA 430
           D   +I L    +  V    +I S+  I  GI +       +   P A+ +A     FP 
Sbjct: 71  DRASLIDLTLSHLALVAASSLIGSLAAIAAGIAV--TRPAGADFLPVARSIANLGQTFPP 128

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
                L V  V +      L L+L  +      +  + +AG  A P    + A    ++ 
Sbjct: 129 VAVLALAVPAVGFGAAPVLLALTLYGLL----PVFESTLAGLGAIPAATLDAARGMGMSA 184

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +    I LP   P  V G   A       + +          +   GLG  I    +  
Sbjct: 185 RQRLVSIELPLAMPVIVNGVRLAAVINLGTATIG-------STVAARGLGDVIIAGLQTS 237

Query: 551 SFPEVVLGVLIMCCFVLAL 569
           +   V+ G +I+    + L
Sbjct: 238 NTAFVLQGGVIVALLAVLL 256


>gi|294816253|ref|ZP_06774896.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|326444583|ref|ZP_08219317.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|294328852|gb|EFG10495.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
          Length = 223

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+G+ IG     +      A    A P      L+V       L+       L+     
Sbjct: 47  LPIGLLIGHTGRGAFLAINLASFGRALPTVG---LIVLVFLASGLSMTPVYVSLVAL-AV 102

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             ++ N  AG  A   D ++ A    +   +    + +P   P  +TG   A       +
Sbjct: 103 PSVVTNTYAGMRAVDPDTRDAARGQGMRAHQVLLRVEIPLALPLIMTGLRLALIQVVATA 162

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
            ++   S+G       GLG Y+ +   +    +
Sbjct: 163 TIAAYVSFG-------GLGRYVFDGLAQRDLVQ 188



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                L   + R   + + +    +++P +G +    +          +     A+ ++ 
Sbjct: 47  LPIGLLIGHTGRGAFLAINLASFGRALPTVGLIVLVFLASGLSMTPVYVSLVALAVPSVV 106

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           T        + Y  +  +  D  + +R   +   Q    + +P ++P ++  + +++   
Sbjct: 107 T--------NTYAGMRAVDPDTRDAARGQGMRAHQVLLRVEIPLALPLIMTGLRLALIQV 158

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
                 +  +  G       G+G Y+   + ++DL
Sbjct: 159 VATATIAAYVSFG-------GLGRYVFDGLAQRDL 186


>gi|242280930|ref|YP_002993059.1| phosphate ABC transporter inner membrane subunit PstC
           [Desulfovibrio salexigens DSM 2638]
 gi|242123824|gb|ACS81520.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio salexigens DSM 2638]
          Length = 450

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 76  MVISLLFTFVYATLAAKSR------RLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMN 125
            ++S L       + A         ++  ++ P ++++ ++P  ++GF    VV  +   
Sbjct: 231 TMLSSLIAIPLGVMTAIYLAEIAPLKVRNIVKPAVEMLAALPSVVIGFFGMVVVAPFLQE 290

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +   V      A   +    V  +T     +L ++P +L+E S +   + WQ  + + V
Sbjct: 291 TFDIAVGLNLFNASVMLAFMAVPTITSISEDALYSVPPELKEASLALGATHWQSIYKVIV 350

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           P S+ G+   +++ M+      +   M+  G
Sbjct: 351 PASLSGISTGVILGMARSIGETMVVLMVAGG 381



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 85/249 (34%), Gaps = 23/249 (9%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW---FCVVCGVAIGIAWQSIG 365
           L   V      L + R         +      + +L +F    F  + G+ I        
Sbjct: 143 LLGIVIFALSNLSLSRRTVERIIHSIFLGTAFTSILVLFLIMMFLFIEGLPIFKHVSVTD 202

Query: 366 YIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP------HISS 416
           +I  H  Y    D  + IW   +    V +   ++S+I IP+G+             + +
Sbjct: 203 FIFGHEWYPTDEDPAFGIWPLIVGSGTVTM---LSSLIAIPLGVMTAIYLAEIAPLKVRN 259

Query: 417 KIQPFAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            ++P  ++LAA P+ V          P +               S+++ F     I    
Sbjct: 260 IVKPAVEMLAALPSVVIGFFGMVVVAPFLQETFDIAVGLNLFNASVMLAFMAVPTITSIS 319

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                + P + KE + +   T W+    +I+P       TG I     +   ++V  + +
Sbjct: 320 EDALYSVPPELKEASLALGATHWQSIYKVIVPASLSGISTGVILGMARSIGETMVVLMVA 379

Query: 529 WGHIHLRTT 537
            G   L T+
Sbjct: 380 GGAGLLPTS 388


>gi|197124502|ref|YP_002136453.1| phosphate ABC transporter inner membrane subunit PstC
           [Anaeromyxobacter sp. K]
 gi|196174351|gb|ACG75324.1| phosphate ABC transporter, inner membrane subunit PstC
           [Anaeromyxobacter sp. K]
          Length = 336

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 16/206 (7%)

Query: 76  MVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMN 125
             +S+L +      AA        RRL  VL P+++++  IP  +LGF    V+  +  +
Sbjct: 116 TAVSMLVSVPVGIAAALYASEFAPRRLREVLKPVIELLAGIPSVVLGFFALMVMATWLQS 175

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        + A   +  + +  +      +L  +PR   E S +   + W+  + + +
Sbjct: 176 AFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQAVPRAYREASLALGATRWETAFRVIL 235

Query: 186 PFSMPGLVWNMMM----SMSGGWFFVVAS--EMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           P + PG++  +++    S+      ++AS    I        +  + + IA  + E    
Sbjct: 236 PAAAPGVLAGVVLGFGRSIGETMIVLMASGNAAITSWSLGDSVRTLPATIAAEMGEVVFG 295

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIV 265
              Y++L  +GV       +   +  
Sbjct: 296 GAHYSVLFFIGVELFLFTFVLNALAA 321



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 15/176 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
             + +Q V  V     I +F   + +  ++ ++ +PVGI             +   ++P 
Sbjct: 90  PGYMWQPVSGVPKYSMIPLFVGTLKVTAVSMLVSVPVGIAAALYASEFAPRRLREVLKPV 149

Query: 422 AQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
            +LLA  P+ V     +  ++        +    N  ++ L +  T   ++F V      
Sbjct: 150 IELLAGIPSVVLGFFALMVMATWLQSAFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQ 209

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A P  ++E + +   T W     +ILP   P  + G +   G +   +++  +AS 
Sbjct: 210 AVPRAYREASLALGATRWETAFRVILPAAAPGVLAGVVLGFGRSIGETMIVLMASG 265


>gi|297192926|ref|ZP_06910324.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722668|gb|EDY66576.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 226

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 58/166 (34%), Gaps = 13/166 (7%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+V++       A       + G + V I +  +++P+   L   ++            
Sbjct: 36  VALVLACAIALPVALWLGHIGKGGALAVNISNAGRAVPVFAVLALFML------TPLRSA 89

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +  I A+    V  +  + Y  +  + R + E +R   +SG Q F  + +P + P L+
Sbjct: 90  GYVPTIIALVLFAVPPLLTNAYVGMREVDRAVVEAARGMGMSGGQVFLRVELPLAYPLLM 149

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             +  +          + M+  G       G+G  I       +  
Sbjct: 150 TGLRSAAVQVVATATIASMVGQG-------GLGRIITAGFNTYNTP 188



 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 9/163 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           V +++A  I +PV +W+G      +     +    A P      L +  ++       + 
Sbjct: 36  VALVLACAIALPVALWLGHIGKGGALAVNISNAGRAVPVFAV--LALFMLTPLRSAGYVP 93

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + ++      +L N   G         E A    ++G + +  + LP  +P  +TG  
Sbjct: 94  TIIALVLFAVPPLLTNAYVGMREVDRAVVEAARGMGMSGGQVFLRVELPLAYPLLMTGLR 153

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +A       + ++ +   G       GLG  I       + P+
Sbjct: 154 SAAVQVVATATIASMVGQG-------GLGRIITAGFNTYNTPQ 189


>gi|171316823|ref|ZP_02906033.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
 gi|171097993|gb|EDT42810.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MEX-5]
          Length = 392

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V++P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGLPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRVQRLLGVDLVLALPVILSGVRI 326



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 51/148 (34%), Gaps = 13/148 (8%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + + + P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGLPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
            +T  +    + L    P  ++G     
Sbjct: 301 GMTRVQRLLGVDLVLALPVILSGVRIVL 328


>gi|169628320|ref|YP_001701969.1| ABC transporter permease [Mycobacterium abscessus ATCC 19977]
 gi|169240287|emb|CAM61315.1| Putative ABC transporter, permease protein [Mycobacterium
           abscessus]
          Length = 261

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 87/255 (34%), Gaps = 28/255 (10%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
             P   +R++      ++A ++ +  +N+            D+      +L + +L    
Sbjct: 20  RRPALAARQLLQPSACIVAVMVSLAYVNLA-----------DVSASEKRSLGMSNLLVLL 68

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            +     ++A V++            +   RR    +  ++   Q+ P +G +    V F
Sbjct: 69  GQHMAISVAATVLTCAVAIPLGIALTRGPVRRYAKTITTLVGFGQAAPAIGLIALGAVLF 128

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G        A+ A+       +  +    L  +   L E +R   +S       +
Sbjct: 129 GIGGIG--------AVLALTVYGALPIVANTVIGLDGVDTRLVEAARGMGMSARSTLIRV 180

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++  +V  +  ++      +V +  +    +     G+G  I   IK Q  + ++ 
Sbjct: 181 ELPLALRVIVAGVRTAL----VLIVGTAALA---SFTGAGGLGQLITTGIKLQQPVTLVV 233

Query: 244 AMLTMLGVIFLYDQL 258
             + +  +    D L
Sbjct: 234 GAILVAALALFIDWL 248



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 67/224 (29%), Gaps = 13/224 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
            C+V  +             +      +  ++ L    M   V   ++   + IP+GI +
Sbjct: 34  ACIVAVMVSLAYVNLADVSASEKRSLGMSNLLVLLGQHMAISVAATVLTCAVAIPLGIAL 93

Query: 409 --GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
             G     +  I        A PA     L         +   L L++         I+ 
Sbjct: 94  TRGPVRRYAKTITTLVGFGQAAPAIGLIALGAVLFGIGGIGAVLALTVYGAL----PIVA 149

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N + G         E A    ++       + LP      V G  TA       + ++  
Sbjct: 150 NTVIGLDGVDTRLVEAARGMGMSARSTLIRVELPLALRVIVAGVRTALVLIVGTAALASF 209

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              G       GLG  I    +      +V+G +++    L ++
Sbjct: 210 TGAG-------GLGQLITTGIKLQQPVTLVVGAILVAALALFID 246


>gi|24113519|ref|NP_708029.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30063575|ref|NP_837746.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806107|ref|YP_689627.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|24052561|gb|AAN43736.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30041828|gb|AAP17555.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110615655|gb|ABF04322.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|281601586|gb|ADA74570.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Shigella flexneri 2002017]
 gi|313651231|gb|EFS15629.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri 2a str. 2457T]
 gi|332754758|gb|EGJ85123.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri 4343-70]
 gi|332755746|gb|EGJ86107.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri K-671]
 gi|332756228|gb|EGJ86579.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri 2747-71]
 gi|333001837|gb|EGK21403.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri K-218]
 gi|333016683|gb|EGK36012.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri K-304]
          Length = 243

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +       L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|115359282|ref|YP_776420.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
 gi|115284570|gb|ABI90086.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria AMMD]
          Length = 392

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 78/196 (39%), Gaps = 12/196 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++R  F     L+A  +VI  I++ L           ++    +  D     + A R   
Sbjct: 135 LARLAFGPWRRLVALAVVIAAISVPL--ASGWWDGLSVMREYAVRTD--DFWREAIRHVS 190

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
               ++  +L+         A+   +  V++P+L+I+Q+IP +      +     L    
Sbjct: 191 LAGGSVAAALVAGVPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMMAPLGLLAAHV 250

Query: 131 VIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + A L         A+ A+F   +  +  S+   L  +P  + E +R+  ++  Q+   
Sbjct: 251 PLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMGMTRVQRLLG 310

Query: 183 LGVPFSMPGLVWNMMM 198
           + +  ++P ++  + +
Sbjct: 311 VDLVLALPVILSGVRI 326



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 13/188 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             +   +    V+  +++ +A      +     Y       W   I    +    + A++
Sbjct: 141 GPWRRLVALAVVIAAISVPLASGWWDGLSVMREYAVRTDDFWREAIRHVSLAGGSVAAAL 200

Query: 400 I-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL---- 454
           +  +P+GI       + + + P   ++   P+   + L+++ +     +  L  +L    
Sbjct: 201 VAGVPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMMAPLGLLAAHVPLAAALGIRG 260

Query: 455 --------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +   +   I  +V+ G    P    E A +  +T  +    + L    P  
Sbjct: 261 IGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMGMTRVQRLLGVDLVLALPVI 320

Query: 507 VTGAITAC 514
           ++G     
Sbjct: 321 LSGVRIVL 328


>gi|331658207|ref|ZP_08359169.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA206]
 gi|331056455|gb|EGI28464.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA206]
          Length = 243

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 79/245 (32%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  ++A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLLAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGQQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  +      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGSIDASVTEVAKGMGMSCSQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 70/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + +++++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLLAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L +I   + EV++   +S  Q+   
Sbjct: 110 IG--------FGQQPAIIALILYGVLPVLQATLAGLGSIDASVTEVAKGMGMSCSQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|309811672|ref|ZP_07705451.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308434473|gb|EFP58326.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 246

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 16/243 (6%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI----VNHFTYQDVLYVIWLGCITM 387
           ++    +    M+      ++      + W+    +         +  +  + W      
Sbjct: 1   MRKRLGRERFGMIVGLPILILLVGGGWVIWRLNADLDDIEARQLEWSLLGTLFWQHLKVT 60

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
               V +++ +   IP+G+ +  RP       P   +  A  A     L+V    +   +
Sbjct: 61  AAAAVAVLVTA---IPLGVLL-TRPRFRRFSGPVIAIANAGQATPVIGLIVLLAMWIAFD 116

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               +  L I+     +L N + G         E A    ++       I +P   P  +
Sbjct: 117 FWTAVLALAIY-AFLPVLRNTMVGLQQVDQTLVEAARGMGMSQMATLLRIEMPLAAPIIM 175

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            G  TA       +  +   + G       GLG  I    +   +P +V G +++    L
Sbjct: 176 AGVRTALVLVAGTASFAAFINAG-------GLGELITTGIKLFRYPVLVSGGILIALLAL 228

Query: 568 ALN 570
           A  
Sbjct: 229 AFE 231



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 76/227 (33%), Gaps = 17/227 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I ++  G     +  D+ DI    L+   L     +      +A V  L+       L 
Sbjct: 19  LILLVGGGWVIWRLNADLDDIEARQLEWSLLGTLFWQHLKVTAAAAVAVLVTAIPLGVLL 78

Query: 91  AK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            +   RR    ++ I +  Q+ P++G +    ++    +          A+ A+      
Sbjct: 79  TRPRFRRFSGPVIAIANAGQATPVIGLIVLLAMWIAFDF--------WTAVLALAIYAFL 130

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    L  + + L E +R   +S       + +P + P ++  +  +       +V
Sbjct: 131 PVLRNTMVGLQQVDQTLVEAARGMGMSQMATLLRIEMPLAAPIIMAGVRTA-------LV 183

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                      I   G+G  I   IK      ++   + +  +   +
Sbjct: 184 LVAGTASFAAFINAGGLGELITTGIKLFRYPVLVSGGILIALLALAF 230


>gi|260778142|ref|ZP_05887035.1| phosphate transport system permease protein PstC [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606155|gb|EEX32440.1| phosphate transport system permease protein PstC [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 310

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 97/266 (36%), Gaps = 23/266 (8%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP  A      
Sbjct: 32  KERIFHGLFLTSAVIGIVSLAVIAYFIVKESIPAFQEAGVTGIVLGQDWLPP-ALYGVAT 90

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S    ++       L A        +RL  V+ P ++++  IP + +    L 
Sbjct: 91  MIVASIVSTFGAVIVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLAGIPSVVYGFFGLV 150

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 151 IIVPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKI 210

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS--------YI 229
              + L VP +  G++  +++ +       +A  M++     +P   + S         I
Sbjct: 211 FTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPQGILDSARTLTANIAI 270

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLY 255
            ++         LYA   +L V  + 
Sbjct: 271 EMSYASGVHANALYATGVVLLVFIMM 296



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 15/178 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    ++    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 78  QDWLPPALYGVATMIVASIVSTFGAVIVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLA 137

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +       N  L   +++       ++        A P  
Sbjct: 138 GIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRT 197

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +KE + +   +       +++P      +TG I   G A   ++   +       +  
Sbjct: 198 YKEGSLALGASKIFTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPQ 255


>gi|229821150|ref|YP_002882676.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
 gi|229567063|gb|ACQ80914.1| binding-protein-dependent transport systems inner membrane
           component [Beutenbergia cavernae DSM 12333]
          Length = 234

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + +   +     L A++++L+     A  A    RL   ++    ++ +IP L   
Sbjct: 23  NSEEIARALGQHVSMTLQAVLVALVIAIPLALAARFRPRLAGAILGTTAVLYTIPSLALF 82

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              V +        VIG  L A+  +          ++   L ++P +L + +R   +  
Sbjct: 83  ILLVPFTGASRTTVVIGLVLYALLLLVR--------NILAGLRDVPAELRDAARGQGMDS 134

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            Q    +  P + P +V  + ++        V++  +V     +   G+G  +       
Sbjct: 135 RQLLLRVDAPLATPAVVTGLRLT-------TVSTIALVTVGVAVGHGGLGQLMFRGFASN 187

Query: 237 DLLAIL 242
               + 
Sbjct: 188 YRAQVF 193



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 11/166 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  +++A +I IP+ +   FRP ++  I     +L   P+   F L+V           +
Sbjct: 39  LQAVLVALVIAIPLALAARFRPRLAGAILGTTAVLYTIPSLALFILLVPFTGASRTTVVI 98

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L L  +         N++AG    P + ++ A    +   +    +  P   P  VTG 
Sbjct: 99  GLVLYALLLLV----RNILAGLRDVPAELRDAARGQGMDSRQLLLRVDAPLATPAVVTGL 154

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
                       V      G       GLG  +          +V 
Sbjct: 155 RLTTVSTIALVTVGVAVGHG-------GLGQLMFRGFASNYRAQVF 193


>gi|299136662|ref|ZP_07029845.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298601177|gb|EFI57332.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 286

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 61/206 (29%), Gaps = 13/206 (6%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +IW   ++  R   + +   I  + + + IG  P   +    F        A    P++
Sbjct: 88  SMIWKDTVSSGRRFFISLFLLIPAVILALHIGLFPWFGAGFLRFVLFFDKIVALSLLPIL 147

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                            L++ G    ++ +V     A P +    A +     +     +
Sbjct: 148 FIVFGI----DEWSKIALVVIGVAPTMILDVTQMVKAVPQEQIVKAFTLDANNFDVAYRV 203

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +   I P  +                 E+ +       + GL   IA          ++ 
Sbjct: 204 VFRQILPQVINSLRLNLKPMMLFLFAGEMIA------ASDGLAYRIAIMRRHMGMDIILP 257

Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580
            VL +   +  ++   R +   L+ +
Sbjct: 258 YVLWVAFLLFLIDFSLRVINRRLHPW 283



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 76/211 (36%), Gaps = 18/211 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + +    +  R   ++ + L+   + A         G   +  +     I  L  L  
Sbjct: 88  SMIWKDTVSSGRRFFISLFL-LIPAVILALHIGLFPWFGAGFLRFVLFFDKIVALSLLPI 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + F           E + I  +       M   + Q +  +P++    + +   + + 
Sbjct: 147 LFIVFGID--------EWSKIALVVIGVAPTMILDVTQMVKAVPQEQIVKAFTLDANNFD 198

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + +     +P ++ ++ +++     F+ A EMI   D      G+   IA+  +   +
Sbjct: 199 VAYRVVFRQILPQVINSLRLNLKPMMLFLFAGEMIAASD------GLAYRIAIMRRHMGM 252

Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
             IL  +L +  ++FL D   +++ R +  W
Sbjct: 253 DIILPYVLWVAFLLFLIDFSLRVINRRLHPW 283


>gi|240949078|ref|ZP_04753429.1| D-methionine transport system permease protein MetI [Actinobacillus
           minor NM305]
 gi|240296551|gb|EER47176.1| D-methionine transport system permease protein MetI [Actinobacillus
           minor NM305]
          Length = 225

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T      A ++S++       LA          + RL  VL  +++I +S+P    L
Sbjct: 21  TLETIYMGFVATLLSVVVGLPIGFLAFLTGKGEILENTRLHQVLDVVINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LIVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVTKFYLPESLPILINGITLTL 162



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 14/212 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +N  T Q    V      T++   V  +++ ++ +P+G          I     + 
Sbjct: 2   WDNFMNELTPQMWQLVASSTLETIYMGFVATLLSVVVGLPIGFLAFLTGKGEILENTRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVVINIGRSVPFIILLIVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P    E A S   T W+      LP   P  + G           S ++     G 
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVTKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGG 179

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +       G +      K     +++ ++++ 
Sbjct: 180 LGNLAISYGEHRNMIYVKWIATVIIVAIVMIS 211


>gi|226304343|ref|YP_002764301.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226183458|dbj|BAH31562.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 265

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 67/179 (37%), Gaps = 10/179 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I    IT+    V   +     + V         +     P A LL + P     P++V
Sbjct: 63  IIDNLFITLRDASVGFAVGMTAALVVASIFVVSRTVEQTFMPVAMLLRSVPLVAMTPIIV 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  +   + +++++ F      L  ++ G  A P   +++ +++  + W   R + 
Sbjct: 123 LIFGRGIVGVTVMVAIVVFF----PALVMIMVGLRAAPAQAQDLIAAYGGSRWTALRMVS 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +P   P     A  +  GA   +++ E    G       GLG+ + ++  +  + E+  
Sbjct: 179 VPSALPAVFAAARVSVPGALIGALIGEWLGSGQ------GLGSSMIKAIPRYQYNELWA 231



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               + +    V A++   SR +    +P+  +++S+P++      V+ F     G  + 
Sbjct: 76  VGFAVGMTAALVVASIFVVSRTVEQTFMPVAMLLRSVPLVAMTPIIVLIFGRGIVGVTVM 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F      +          L   P   +++  ++  S W     + VP ++P + 
Sbjct: 136 VAIVVFFPALVMIM--------VGLRAAPAQAQDLIAAYGGSRWTALRMVSVPSALPAVF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               +S+ G     +  E +  G       G+GS +  AI       +  
Sbjct: 188 AAARVSVPGALIGALIGEWLGSGQ------GLGSSMIKAIPRYQYNELWA 231


>gi|84516814|ref|ZP_01004172.1| polyamine ABC transporter, permease protein [Loktanella
           vestfoldensis SKA53]
 gi|84509282|gb|EAQ05741.1| polyamine ABC transporter, permease protein [Loktanella
           vestfoldensis SKA53]
          Length = 534

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 83/212 (39%), Gaps = 18/212 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPIL---------------DIMQ 108
            RT +  L+ MV  +L  +  A + A   SR+  ++L+ +L                ++Q
Sbjct: 314 IRTLIMSLTIMVSCILLGYPVAWMLANLPSRQANLMLILVLLPFWTSLLVRTSAWKVLLQ 373

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
              ++  L   V    +     +I      I A+    +  M   +Y  +  IP      
Sbjct: 374 QQGVINDLLVWVGLVGDESRLTMINNATGTIIAMTHILLPFMILPLYSVMKTIPPSYLRA 433

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           ++S   + W  FW +  P S+PG+    ++       + +  E++     +     I  +
Sbjct: 434 AKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTSGIFISNRIAYH 493

Query: 229 IALAIKEQDLLAILYAMLTMLGVIF-LYDQLL 259
           I+ ++      A+   +L ++  ++  YD+++
Sbjct: 494 ISSSLNWGLAAALGTILLAVVLALYWAYDRIV 525



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 42/138 (30%), Gaps = 4/138 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 382 LVWVGLVGDESRLTMINNATGTIIAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATN 441

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S   G
Sbjct: 442 WTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTSGIFISNRIAYHISSSLNWG 501

Query: 551 SFPEVVLGVLIMCCFVLA 568
               +   +  +   V+ 
Sbjct: 502 ----LAAALGTILLAVVL 515


>gi|307267068|ref|ZP_07548581.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917899|gb|EFN48160.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 299

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 77/165 (46%), Gaps = 5/165 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   + L    A++IS       A      + +    +L P ++I   IP +  G++ 
Sbjct: 76  LQFIIGSILVSAFAIMISAPLGVSSAIFMVEIEKKLGQKILQPAIEIFVGIPSVVYGWVG 135

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 136 LTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIRSLPVEIREASYALGATR 195

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           WQ   ++ +P +  G++  +++ ++  +   +A +M++    VIP
Sbjct: 196 WQTIRHVVIPAAKSGILTAIILGLARAFGEALAVQMVIGNRPVIP 240



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 64/161 (39%), Gaps = 9/161 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++      I+I++ + +   I++    +      +QP  ++    P+ V+  + ++ +  
Sbjct: 82  SILVSAFAIMISAPLGVSSAIFMVEIEKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVP 141

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                +  L  +L   +L++       + +V      + P + +E + +   T W+  R+
Sbjct: 142 FISKHFGGLGFSLLAGILVLTIMTLPTITSVSTDAIRSLPVEIREASYALGATRWQTIRH 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +++P      +T  I     A+  ++  ++       +  +
Sbjct: 202 VVIPAAKSGILTAIILGLARAFGEALAVQMVIGNRPVIPKS 242


>gi|257467877|ref|ZP_05631973.1| phosphate ABC transporter, inner membrane subunit PstA
           [Fusobacterium ulcerans ATCC 49185]
 gi|317062166|ref|ZP_07926651.1| phosphate ABC transporter [Fusobacterium ulcerans ATCC 49185]
 gi|313687842|gb|EFS24677.1| phosphate ABC transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 280

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T    +  +V+S+ F           AK   L  ++   +  +  IP + +  F +  F+
Sbjct: 67  TIYLTIGTIVVSVPFGIFTGIYLVEYAKDNLLTRIINLTIINLAGIPSIIYGLFGMALFV 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V     +    I    V  +  S  +SL  IP  L E S +   + W+    + 
Sbjct: 127 IFLGFGVSIISGSLTLGIMCLPV--IITSTRESLLAIPNHLREASLALGATKWETITKVV 184

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++  +++S+S  
Sbjct: 185 LPAALPGILTGVILSISRA 203



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 5/146 (3%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVF 433
             +      T++  +  I+++    I  GI++        ++  I      LA  P+ ++
Sbjct: 58  GGIFPAIIGTIYLTIGTIVVSVPFGIFTGIYLVEYAKDNLLTRIINLTIINLAGIPSIIY 117

Query: 434 --FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             F + +  +        +  SL +       I+ +      A PN  +E + +   T W
Sbjct: 118 GLFGMALFVIFLGFGVSIISGSLTLGIMCLPVIITSTRESLLAIPNHLREASLALGATKW 177

Query: 492 RWWRYIILPGIFPYYVTGAITACGGA 517
                ++LP   P  +TG I +   A
Sbjct: 178 ETITKVVLPAALPGILTGVILSISRA 203


>gi|163744025|ref|ZP_02151393.1| probable ferric iron transport system permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161382713|gb|EDQ07114.1| probable ferric iron transport system permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 567

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 84/587 (14%), Positives = 181/587 (30%), Gaps = 68/587 (11%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+   I  +   + +  ++ + + G+     P   + ++   L   S       + +   
Sbjct: 15  RLLSAILVVAICLTLAPVLRLFVEGVTYQGDPS--LTLMRDVLAQPSTLSALKHSLITAG 72

Query: 74  SAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
              ++SL+    +A L A +  R    LV  L I   IP        + +   + P   +
Sbjct: 73  CGTLVSLVLGSAFAFLVALTDLRAKAALVFCLMIPMMIPP---QITALSWVQIMGPSSAL 129

Query: 133 GAELAA----------------IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              L                  IF +    +  +  ++   L ++P+D+ E +R     G
Sbjct: 130 LKTLGIAPPLGAPQPLYSPEGIIFLLGIQHMSIIFLTLRAGLRSVPQDVVEAARISGAKG 189

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + +W + +P ++P L     ++            M+ +      LP +       +   
Sbjct: 190 LRIWWQVVLPLTLPSLGAGTAITFVTALGNFGIPAMLGIPAGYATLPTLVYQKLAGMGTT 249

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296
            L  +  ++L ML  +     +L + +     K  L  +T                    
Sbjct: 250 VLAEV--SVLAMLIGVVAVAGILLQRLFQTRQKLHLVGSTS------------------- 288

Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356
                            + L   LG  R         +     V  M  +    ++    
Sbjct: 289 -----------------RPLVLPLGKARLPVEILLWAVIFAILVLPMFGLLATSLIPAYG 331

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HIS 415
           + +   ++                     +    +   ++ ++I  P+   +  R   ++
Sbjct: 332 VPLRLDTVSIASWQEVIFRQPSTSRAFTNSFGLAMGASLVLAVICFPLAWLMERRKNRLA 391

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN-----LWLSLLMIFGTQWYILF-NVI 469
                   L  A P  V    ++  +             +W+  L      + ++F  V 
Sbjct: 392 LLFDSLLDLPYALPGVVLSIAMILLLIKLPFTDATLYGTIWIIFLAYIARFFAVMFRPVQ 451

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A    F     E A S   + +R  R +I P   P    GAI     A+N   VS +  W
Sbjct: 452 ASLKQFDPAMDEAAQSVGASLYRRLRDVIFPLSAPAAAAGAILVFLTAFNEVTVSALL-W 510

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                    +   + +S E G    + + ++++   ++AL + L   
Sbjct: 511 SSGTETLGVVIFNLDDSGETGMASALAMTIVLVVIVLMALIQLLSRR 557



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 82/197 (41%), Gaps = 5/197 (2%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNL-Y 127
           L M +++V++ +  F  A L  + + RL ++   +LD+  ++P +      ++  + L +
Sbjct: 364 LAMGASLVLA-VICFPLAWLMERRKNRLALLFDSLLDLPYALPGVVLSIAMILLLIKLPF 422

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               +   +  IF  + ++ + + F  +  SL      ++E ++S   S +++   +  P
Sbjct: 423 TDATLYGTIWIIFLAYIARFFAVMFRPVQASLKQFDPAMDEAAQSVGASLYRRLRDVIFP 482

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S P      ++     +  V  S  ++       L  +   +  + +     A+   ++
Sbjct: 483 LSAPAAAAGAILVFLTAFNEVTVS-ALLWSSGTETLGVVIFNLDDSGETGMASALAMTIV 541

Query: 247 TMLGVIFLYDQLLFRPM 263
            ++ V+    QLL R  
Sbjct: 542 LVVIVLMALIQLLSRRF 558



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 2/116 (1%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   + AG  + P D  E A      G R W  ++LP   P    G       A     +
Sbjct: 163 IFLTLRAGLRSVPQDVVEAARISGAKGLRIWWQVVLPLTLPSLGAGTAITFVTALGNFGI 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             +      +     L     +    G+     + VL M   V+A+   L   L+ 
Sbjct: 223 PAMLGIPAGYATLPTLVY--QKLAGMGTTVLAEVSVLAMLIGVVAVAGILLQRLFQ 276


>gi|300715965|ref|YP_003740768.1| ABC transporter permease [Erwinia billingiae Eb661]
 gi|299061801|emb|CAX58917.1| ABC transporter permease protein YehW [Erwinia billingiae Eb661]
          Length = 241

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 21/208 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L +  +   A  +   ++  M   +  T          +    ++  ++   Q+ P +
Sbjct: 47  LQLALAHIELVAVSSLFAVIVGMGAGIFVTRPAG------KEFRSLIETLVAAGQTFPPV 100

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V              E  AI A+F   +  +       +  +P    E++    
Sbjct: 101 AVLAIAVPIMG--------FGEKPAIIALFLYGLLPILQGTLAGIGAVPASAREIAEGVG 152

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S WQ    + +P +   +V  +  S+        A+    VG        +GS + + +
Sbjct: 153 MSSWQILRKVELPLAASVIVAGIRTSVII--NIGTAAIASTVGAKT-----LGSPVIIGL 205

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +   ++     +  +  + D+L  R
Sbjct: 206 SGFNTAYVIQGACLVALLAIVTDRLFER 233



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 21/237 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   +  ++  +       +  +             + L    +  V V  + A I+ +
Sbjct: 10  WLIAVFIALLVLLPYSQPLFASWFPELDRPMYRQDSFLQLALAHIELVAVSSLFAVIVGM 69

Query: 403 PVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
             GI++         S I+        FP      + V  + +      + L L  +   
Sbjct: 70  GAGIFVTRPAGKEFRSLIETLVAAGQTFPPVAVLAIAVPIMGFGEKPAIIALFLYGLL-- 127

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA----CGG 516
              IL   +AG  A P   +E+A    ++ W+  R + LP      V G  T+     G 
Sbjct: 128 --PILQGTLAGIGAVPASAREIAEGVGMSSWQILRKVELPLAASVIVAGIRTSVIINIGT 185

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A  AS V        + +  +G            +   V+ G  ++    +  +R  
Sbjct: 186 AAIASTVGAKTLGSPVIIGLSGF-----------NTAYVIQGACLVALLAIVTDRLF 231


>gi|224477674|ref|YP_002635280.1| putative ABC transporter permease [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422281|emb|CAL29095.1| putative ABC transporter permease protein [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 219

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           +LD   L +   +T L +  ++VI  L       L   +++        +  +L PI++I
Sbjct: 5   SLDSSQLWEALYQTLLMVSISLVIGALIGIPLGILLVVTKKNGIWENVAVYHILNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  FRSIP-FIILLIAIVPFTKLIVGTSIGT-AAAIVPLTVYVAPYIARLVENSLLEVDSGVI 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E + +   S +Q   Y  +P ++  L+  +  ++ G
Sbjct: 123 EAAHAMGASPFQIIRYFLMPEALGSLILAITTAIIG 158



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 53/142 (37%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V + ++I ++I IP+GI +             +   + P   +  + P  +   + 
Sbjct: 18  TLLMVSISLVIGALIGIPLGILLVVTKKNGIWENVAVYHILNPIINIFRSIPFIILL-IA 76

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++  +  ++  T +   YI   V        +   E A +   + ++  
Sbjct: 77  IVPFTKLIVGTSIGTAAAIVPLTVYVAPYIARLVENSLLEVDSGVIEAAHAMGASPFQII 136

Query: 495 RYIILPGIFPYYVTGAITACGG 516
           RY ++P      +    TA  G
Sbjct: 137 RYFLMPEALGSLILAITTAIIG 158


>gi|213026809|ref|ZP_03341256.1| inner membrane ABC transporter permease protein YehY [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 253

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 8/134 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  + +   ++ +L            S      +  +L+++Q+IP +      +    
Sbjct: 113 LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA 172

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L       AE          A+ A+    +  +   +   L  +PRD+ E +R+  +S 
Sbjct: 173 GLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS 232

Query: 177 WQKFWYLGVPFSMP 190
            Q+F ++ +P ++P
Sbjct: 233 GQRFRHVQLPLALP 246



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 69/191 (36%), Gaps = 14/191 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +   ++       ++L      V   +     + ++  +  +   QDV     +  + + 
Sbjct: 61  DAIRRITVGPLWRWLLHAQIVIVPLALLFSGTFDNLSLLKEYTNRQDVFDAALVQHLMLL 120

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
                ++ A  I +P+G+W  F       +     ++   P+   F L+++ ++      
Sbjct: 121 --AGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQF 178

Query: 449 NLWL------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                            + ++      ++  V+AG +  P D  E A +  ++  + +R+
Sbjct: 179 PWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRH 238

Query: 497 IILPGIFPYYV 507
           + LP   P ++
Sbjct: 239 VQLPLALPVFL 249


>gi|26248506|ref|NP_754546.1| ABC transporter permease [Escherichia coli CFT073]
 gi|227887182|ref|ZP_04004987.1| ABC superfamily ATP binding cassette transporter permease
           [Escherichia coli 83972]
 gi|300978681|ref|ZP_07174371.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301048860|ref|ZP_07195854.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|26108911|gb|AAN81114.1|AE016763_73 Hypothetical ABC transporter permease protein yehW [Escherichia
           coli CFT073]
 gi|227835532|gb|EEJ45998.1| ABC superfamily ATP binding cassette transporter permease
           [Escherichia coli 83972]
 gi|300299315|gb|EFJ55700.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300409613|gb|EFJ93151.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|307554197|gb|ADN46972.1| putative glycine/betaine/choline ABC superfamily transport protein
           [Escherichia coli ABU 83972]
 gi|315294508|gb|EFU53856.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 243

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|289578657|ref|YP_003477284.1| phosphate ABC transporter inner membrane subunit PstA
           [Thermoanaerobacter italicus Ab9]
 gi|289528370|gb|ADD02722.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter italicus Ab9]
          Length = 295

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 79  SLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+          A   K   L  ++   ++ + S+P +    F ++ F+ +         
Sbjct: 76  SVPIGLGAGIYMAEYAKPGLLTEIIRLSIETLSSMPSIVIGLFGLLVFVTMTGWGYSLIA 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A    +    V  MT     S+ ++P  L E S +   + WQ    + VP +MPG++  
Sbjct: 136 GALALTVLNLPV--MTRVSEDSIRSVPNSLREASYALGATKWQTIVKVVVPAAMPGIITG 193

Query: 196 MMMSMS 201
           ++++  
Sbjct: 194 IILTAG 199



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 400 IWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           I +  GI++        ++  I+   + L++ P+     +V+                 +
Sbjct: 79  IGLGAGIYMAEYAKPGLLTEIIRLSIETLSSMPS-----IVIGLFGLLVFVTMTGWGYSL 133

Query: 457 IFGTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           I G     + N+            + PN  +E + +   T W+    +++P   P  +TG
Sbjct: 134 IAGALALTVLNLPVMTRVSEDSIRSVPNSLREASYALGATKWQTIVKVVVPAAMPGIITG 193

Query: 510 AITACGGAWN 519
            I   G  + 
Sbjct: 194 IILTAGRIFG 203


>gi|190890184|ref|YP_001976726.1| proline/glycine betaine ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190695463|gb|ACE89548.1| probable proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
          Length = 388

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 9/203 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L  L ++ I+++       L     RL  V++  L ++Q+IP L      ++   
Sbjct: 181 AISHLLLALGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLG 240

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + + +         A+ A+    +  +  +    L  +   + + +    L+ 
Sbjct: 241 YLATHVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTR 300

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV-VASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q    + +P + P ++  + + +      V +A+ +   G  +    G+G      +  
Sbjct: 301 RQILVGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLL 360

Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258
             +  + +A  + + +  + D +
Sbjct: 361 GAVPTVFFAFSSAVILDAVIDSI 383



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +  + IA I+ +P+GI   + P + + +     L+   P+   F L++  + Y   
Sbjct: 185 LLLALGSLAIAIILGLPLGILCFWVPRLRAVVLQGLSLIQTIPSLALFGLLMLPLGYLAT 244

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  L  ++             ++  +   I+ N + G        ++ A+   +T  +  
Sbjct: 245 HVPLASAIGIRGIGTAPALIALVLYSLLPIVANTVVGLQGVDPSVRDAAAGMGLTRRQIL 304

Query: 495 RYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I +P  FP  +TG       A    +I + +   G       GLG    +    G+ P
Sbjct: 305 VGIDMPLAFPVILTGIRIVLVQAIGMVTIAALIGGGGFGIFIFQGLGQTAMDLVLLGAVP 364

Query: 554 EVVLG 558
            V   
Sbjct: 365 TVFFA 369


>gi|324114454|gb|EGC08423.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 243

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  +      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGSIDASVTEVAKGMGMSRSQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L +I   + EV++   +S  Q+   
Sbjct: 110 MG--------FGQQPAIIALILYGVLPVLQATLAGLGSIDASVTEVAKGMGMSRSQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|239832552|ref|ZP_04680881.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239824819|gb|EEQ96387.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 566

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 79/587 (13%), Positives = 171/587 (29%), Gaps = 75/587 (12%)

Query: 22  LLAFVLVIGIINILLHG--IQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMV 77
           +    L++ ++++L  G  + E   P+       +  TL   S       +    +   +
Sbjct: 15  IAGITLIVAVLSLLPMGRLLVELVAPQGQFSTSALVETLGSQSTWVATWHSLQIGIGGTL 74

Query: 78  ISLLFTFVYATLAAKSRRLGM------VLVPILDIMQSIPILGFLTFT--------VVYF 123
           ++L+F  V A L   +   G        + P+L I   +  L +L           +V  
Sbjct: 75  LALVFGIVAALLVGLTNMRGRNVFVLFYVTPLL-IAPQVTALAWLQLFGPSSQFLKIVGL 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                 +     +  I  +   Q   + F  +   L  +PR+L E   S     W     
Sbjct: 134 APPLGSRNPLYSVWGIIFLLGVQYGPLVFLIVRAGLRKLPRELVEAGLSAGAGKWTVLRT 193

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P   P ++    ++                  + +   GI +++ +      L  ++
Sbjct: 194 IILPLMTPSIIGAAALAF----------------VSCVGNFGIPAFLGIPSNYLVLPTLI 237

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           Y  L   G   L                            S ++ L            S 
Sbjct: 238 YQRLAGGGPSVL----------------------SGVAVLSVLIGLIAMAGIAAQEYASR 275

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
              F  +S ++      LG  R     +   L        ++ +    +V    + + + 
Sbjct: 276 RRDFRIVSTSLPAAPFALGRWRVPVEASAWLLIVVVLFLPLIGLTLSALVPAYGVPLTFA 335

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +       F   +          ++   +     A +I +P+   + +R    +   P  
Sbjct: 336 TATVENFRFVLMEHAGAARAFRNSVVLSLSAAFFAVLIAVPLAYMLAWRKRRWT---PIL 392

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN------------VIA 470
              A  P      +V++          L +  + ++ T W ILF              +A
Sbjct: 393 NFAAEMP-YALPGVVLAIACLLLFLKPLPVIGVSLYNTLWIILFAYLARFFVLALRPTVA 451

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G        +E A       +   R II P + P  + G +     A+    VS +  W 
Sbjct: 452 GLHQIDRAMEEAARVAGAGLFYRLRTIIFPLVAPATLAGGVLIFMTAFCELTVSALL-WA 510

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                   +     ++ +      + +  + +   ++         L
Sbjct: 511 SGSETLGVVMFSFEQAGDSAYAAAISMLAVAVTFMLMLATNLFARRL 557


>gi|219854588|ref|YP_002471710.1| hypothetical protein CKR_1245 [Clostridium kluyveri NBRC 12016]
 gi|219568312|dbj|BAH06296.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 316

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 68/159 (42%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   L A++IS   +   A        R    +L P L++   IP +  G++ F+V+  
Sbjct: 98  STFVSLGAVIISAPISIALAVFMHYISPRIGSKILQPSLELFVGIPSVVYGWIGFSVLIP 157

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+      +  + +A I  +    +  ++     ++  IP+   E S     + WQ    
Sbjct: 158 FLKNSFHGIGFSLIAGILVLSIMILPTISSISADAVKTIPKSYMEASYGLGATRWQTISK 217

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 218 VIVPSAKNGILTGVVLGLARAFGEALAVQMVIGNTIKFP 256



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 15/211 (7%)

Query: 344 LDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           L I +F    G+A  +   +    ++ +     D         I       + + A II 
Sbjct: 50  LSIIFFITSKGMATFVKRGYPLWEFLFSSKWAPDGNAPKLGALIFFAGSTFVSLGAVIIS 109

Query: 402 IPVGIWIG-----FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPN 449
            P+ I +        P I S  +QP  +L    P+ V+  +  S +      S++ +  +
Sbjct: 110 APISIALAVFMHYISPRIGSKILQPSLELFVGIPSVVYGWIGFSVLIPFLKNSFHGIGFS 169

Query: 450 LWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           L   +L++       + ++        P  + E +     T W+    +I+P      +T
Sbjct: 170 LIAGILVLSIMILPTISSISADAVKTIPKSYMEASYGLGATRWQTISKVIVPSAKNGILT 229

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           G +     A+  ++  ++     I   +  L
Sbjct: 230 GVVLGLARAFGEALAVQMVIGNTIKFPSGLL 260


>gi|34497746|ref|NP_901961.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34103602|gb|AAQ59963.1| probable ABC transporter permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 255

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 15/167 (8%)

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            P+ +   A P  V  P+          +       L+ F   + +L     G    P  
Sbjct: 94  DPYIKAANAMPRVVLAPVFALWFGLGIGSKVALGFTLVFFVVFFNVL----QGVREVPPA 149

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             +          +  R++ LP    +  +    A G A+  ++V E            G
Sbjct: 150 VLDNVRMLGAGRRQLLRHVYLPSAAGWLFSSMRNAVGMAFVGAVVGEYLG------SARG 203

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           +G  I ++        V+ GV ++    L L+  +         R L
Sbjct: 204 MGYLILQAEGAFDINAVIAGVFVLTACALGLDAAV-----SLAERRL 245



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 17/169 (10%)

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
            P +    ++P +       ++F      KV           FT   + + F++ Q +  
Sbjct: 94  DPYIKAANAMPRVVLAPVFALWFGLGIGSKVALG--------FTLVFFVVFFNVLQGVRE 145

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P  + +  R       Q   ++ +P +   L  +M  ++   +   V  E +       
Sbjct: 146 VPPAVLDNVRMLGAGRRQLLRHVYLPSAAGWLFSSMRNAVGMAFVGAVVGEYLG------ 199

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266
              G+G  I  A    D+ A++  +  +       D    L  R ++ W
Sbjct: 200 SARGMGYLILQAEGAFDINAVIAGVFVLTACALGLDAAVSLAERRLLAW 248


>gi|83952001|ref|ZP_00960733.1| phosphate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83837007|gb|EAP76304.1| phosphate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 449

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 53/142 (37%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  +V+SL      +      A   R   ++   +  + ++P + F    + 
Sbjct: 226 MLGSFFMMLVVLVLSLPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGILGLA 285

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +      A L     +    +  +  S   SL  +P  + + +     S  Q  +
Sbjct: 286 VFIQ-FAHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQSIF 344

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P +MPG++   ++ ++  
Sbjct: 345 HHVLPLAMPGILTGTIIGLAQA 366



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M     ++++  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 223 GVSMLGSFFMMLVVLVLSLPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGIL 282

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L   L++   T   I+ +  A   A P   ++ A     +  + 
Sbjct: 283 GLAVFIQFAHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQS 342

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 343 IFHHVLPLAMPGILTGTIIGLAQA 366


>gi|312110211|ref|YP_003988527.1| phosphate ABC transporter inner membrane subunit PstC [Geobacillus
           sp. Y4.1MC1]
 gi|311215312|gb|ADP73916.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           sp. Y4.1MC1]
          Length = 296

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 5/155 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +TL  L A+++S       A        +    VL P+L+++  IP + +    V   + 
Sbjct: 80  STLVSLGAVLLSTPIALALAIFINFISPKFGSAVLKPVLELLVGIPSVVYGWLGVTILIP 139

Query: 126 LYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L      G     LA I  +    +  +T     +L  +P    E S     + WQ    
Sbjct: 140 LLRESFGGVGFSLLAGIIVLSVMILPTITSIASDALSAVPFSYLEASYGLGSTRWQAISR 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + VP +  G+   +++ ++  +   +A +M++   
Sbjct: 200 VIVPAAKTGIFTGIVLGLARAFGEALAVQMVIGNT 234



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 71/175 (40%), Gaps = 9/175 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
           ++  Y  V+++     +++  V++   IA  + I +          S+ ++P  +LL   
Sbjct: 67  SNPKYGAVIFIAGSTLVSLGAVLLSTPIALALAIFINFI--SPKFGSAVLKPVLELLVGI 124

Query: 429 PANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKE 481
           P+ V+  L V+ +      S+  +  +L   ++++       + ++     SA P  + E
Sbjct: 125 PSVVYGWLGVTILIPLLRESFGGVGFSLLAGIIVLSVMILPTITSIASDALSAVPFSYLE 184

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +     T W+    +I+P       TG +     A+  ++  ++     + L +
Sbjct: 185 ASYGLGSTRWQAISRVIVPAAKTGIFTGIVLGLARAFGEALAVQMVIGNTVKLPS 239


>gi|255263573|ref|ZP_05342915.1| binding-protein-dependent transport systems inner membrane
           component [Thalassiobium sp. R2A62]
 gi|255105908|gb|EET48582.1| binding-protein-dependent transport systems inner membrane
           component [Thalassiobium sp. R2A62]
          Length = 544

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 25/211 (11%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL------------- 113
           RT L   +     +L  +  A L A        ++ IL ++     L             
Sbjct: 325 RTLLMSFAITASCILLGYPVAWLLANLPMRSANILMILVLLPFWTSLLVRTSAWKVLLQD 384

Query: 114 -GFLTFTVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            G +   +V+   +     +         I A+    +  M   +Y  +  IP      +
Sbjct: 385 QGVINSLLVWIGVIADDNRLALINNATGTIIAMTHILLPFMILPLYSVMKTIPPTYLRAA 444

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +S   + W  FW +  P S+PG+    ++       + +  E++            G +I
Sbjct: 445 KSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTK--------GVFI 496

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
           +  I      ++ + +   LG I L   LLF
Sbjct: 497 SNRIAYHISSSLNWGLAAALGSILLALVLLF 527



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 2/137 (1%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  ++        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 392 LVWIGVIADDNRLALINNATGTIIAMTHILLPFMILPLYSVMKTIPPTYLRAAKSLGATN 451

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 452 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTKGVFISNRIAYHISSSLNWG 511

Query: 551 SFPEVVLGVLIMCCFVL 567
                 LG +++   +L
Sbjct: 512 L--AAALGSILLALVLL 526


>gi|15600842|ref|NP_232472.1| phosphate ABC transporter, permease protein [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|121590626|ref|ZP_01677961.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|153217008|ref|ZP_01950772.1| phosphate ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153801213|ref|ZP_01955799.1| phosphate ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|153819239|ref|ZP_01971906.1| phosphate ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153823243|ref|ZP_01975910.1| phosphate ABC transporter, permease protein [Vibrio cholerae B33]
 gi|153830272|ref|ZP_01982939.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|227811698|ref|YP_002811708.1| phosphate ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|254226995|ref|ZP_04920557.1| phosphate ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254284795|ref|ZP_04959762.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|298499934|ref|ZP_07009740.1| phosphate ABC transporter, permease PstC [Vibrio cholerae MAK 757]
 gi|9657455|gb|AAF95985.1| phosphate ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121547519|gb|EAX57624.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|124113962|gb|EAY32782.1| phosphate ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124123231|gb|EAY41974.1| phosphate ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|125620482|gb|EAZ48854.1| phosphate ABC transporter, permease protein [Vibrio cholerae V51]
 gi|126510231|gb|EAZ72825.1| phosphate ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126519230|gb|EAZ76453.1| phosphate ABC transporter, permease protein [Vibrio cholerae B33]
 gi|148874247|gb|EDL72382.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|150425580|gb|EDN17356.1| phosphate ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|227010840|gb|ACP07051.1| phosphate ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|297541915|gb|EFH77966.1| phosphate ABC transporter, permease PstC [Vibrio cholerae MAK 757]
          Length = 327

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 49  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALYGVATM 108

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 109 IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 168

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 169 IVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 228

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 229 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 266



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 95  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 154

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 155 GIPSVVYGFFGLVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 214

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 215 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 274

Query: 539 L 539
           L
Sbjct: 275 L 275


>gi|88799185|ref|ZP_01114765.1| phosphate ABC transporter, permease protein (PstA) [Reinekea sp.
           MED297]
 gi|88778168|gb|EAR09363.1| phosphate ABC transporter, permease protein (PstA) [Reinekea sp.
           MED297]
          Length = 437

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++++L  +F     AA          RL  ++   ++ + ++P + F    +  F+N
Sbjct: 223 FFTLLVTLALSFPIGVAAAIYLEEFAPKNRLTEIIEVNINNLAAVPSIVFGLLGLAVFIN 282

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++        +  +       +  +  S   ++  +P  + E +     S  Q   +  +
Sbjct: 283 VFHLPRSAPVVGGLVLTL-MTLPTIIISSRSAIKAVPPSIREAALGLGASKVQMVMHHVL 341

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ M+  
Sbjct: 342 PLAMPGMLTGTIIGMAQA 359



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 6/198 (3%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            +R+S + +     ++    +  ++ +  +        +   +      + F ++V + +
Sbjct: 173 ERRISDLQNSLVESLIESGELKKSFNTTFFTNGDSREPEQAGIRGAMLGSFFTLLVTLAL 232

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  I +   I++     +  ++  I+     LAA P+ VF  L ++        P     
Sbjct: 233 SFPIGVAAAIYLEEFAPKNRLTEIIEVNINNLAAVPSIVFGLLGLAVFINVFHLPRSAPV 292

Query: 454 ---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L++   T   I+ +  +   A P   +E A     +  +   + +LP   P  +TG 
Sbjct: 293 VGGLVLTLMTLPTIIISSRSAIKAVPPSIREAALGLGASKVQMVMHHVLPLAMPGMLTGT 352

Query: 511 ITACGGAWNASIVSEVAS 528
           I     A   +    +  
Sbjct: 353 IIGMAQALGETAPLLMIG 370


>gi|323706105|ref|ZP_08117674.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534549|gb|EGB24331.1| phosphate ABC transporter, inner membrane subunit PstC
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 301

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLT 117
            Q+   +    + A++IS   +   A        +    +L P ++I   IP +  G++ 
Sbjct: 78  LQFILGSVFVSVFAILISTPLSISAAIFMVEIAKKLGKNLLQPAMEIFVGIPSVVYGWIG 137

Query: 118 FTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            TV+  F++ + G +  + LA I  +    +  +T     ++ ++P ++ E S +   + 
Sbjct: 138 LTVLVPFISKHIGGLGFSLLAGILVLTIMVLPTITSVSTDAIKSLPWEIREASYALGATR 197

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++  +   +A +M++     IPL
Sbjct: 198 WQTIRRVILPAAKSGILTAVVLGLARAFGEALAVQMVIGNSPAIPL 243



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 65/161 (40%), Gaps = 9/161 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442
           ++F  V  I+I++ + I   I++    +    + +QP  ++    P+ V+  + ++ +  
Sbjct: 84  SVFVSVFAILISTPLSISAAIFMVEIAKKLGKNLLQPAMEIFVGIPSVVYGWIGLTVLVP 143

Query: 443 -----YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
                   L  +L   +L++       + +V      + P + +E + +   T W+  R 
Sbjct: 144 FISKHIGGLGFSLLAGILVLTIMVLPTITSVSTDAIKSLPWEIREASYALGATRWQTIRR 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +ILP      +T  +     A+  ++  ++       +  +
Sbjct: 204 VILPAAKSGILTAVVLGLARAFGEALAVQMVIGNSPAIPLS 244


>gi|238061446|ref|ZP_04606155.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
 gi|237883257|gb|EEP72085.1| binding-protein-dependent transport system inner membrane component
           [Micromonospora sp. ATCC 39149]
          Length = 240

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 8/200 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +            +A+++  L  +        + R G ++V + ++  +IP L  
Sbjct: 19  TNPGGVLDRLGEHLGMSAAAVLLGCLVAWPVGLWLGHTGRGGGLVVLVSNVTLAIPTLAL 78

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + Y  +     +  + +R   LS
Sbjct: 79  LTILPLTFLGFGRPAVVVALAVFAVP-------PLLANAYTGVRQADPEARDAARGMGLS 131

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD-TVIPLPGIGSYIALAIK 234
           G Q    + +P ++P L      +          +  +  G    I   G G  IA    
Sbjct: 132 GGQVLRQVELPLAVPYLAAGFRTAAVQVVATAALASFVNGGGLGQIIRAGFGLDIAAGGG 191

Query: 235 EQDLLAILYAMLTMLGVIFL 254
           +     +L A L ML  + L
Sbjct: 192 QIIAGGLLVAGLAMLVELVL 211



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ ++ +   + +   V+      +      +++  ++  PVG+W+G        +   
Sbjct: 7   QAVVWLNDPLNWTNPGGVLDRLGEHLGMSAAAVLLGCLVAWPVGLWLGHTGRGGGLVVLV 66

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      ++      +     +    +        +L N   G      + ++
Sbjct: 67  SNVTLAIPTLALLTILPLTFLGFGRPAVVVALAVFAVP---PLLANAYTGVRQADPEARD 123

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++G +  R + LP   PY   G  TA       + ++   + G       GLG 
Sbjct: 124 AARGMGLSGGQVLRQVELPLAVPYLAAGFRTAAVQVVATAALASFVNGG-------GLGQ 176

Query: 542 YI 543
            I
Sbjct: 177 II 178


>gi|54310057|ref|YP_131077.1| putative ABC-type metal ion transport system,permease component
           [Photobacterium profundum SS9]
 gi|46914496|emb|CAG21275.1| putative ABC-type metal ion transport system,permease component
           [Photobacterium profundum SS9]
          Length = 228

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L +   +T   + ++ +I              S        R L   L  +++I +SIP 
Sbjct: 20  LVEALGQTLTMVFASGLIGFALGIPLGVALHLSKEGGQLENRTLNKALGIVVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +++ 
Sbjct: 79  FIILLVAIIPFTRFIVGSSIGT-AAAIVPLTVGAIPFIARLVEGALLEVPSGLVEAAQAM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG++  + +++
Sbjct: 138 GATPQQIVTKVLLPEALPGIINAITITL 165



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 64/195 (32%), Gaps = 18/195 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    +I   + IP+G+ +             ++  +     +  + P  +   + 
Sbjct: 27  TLTMVFASGLIGFALGIPLGVALHLSKEGGQLENRTLNKALGIVVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P+   E A +   T  +  
Sbjct: 86  IIPFTRFIVGSSIGTAAAIVPLTVGAIPFIARLVEGALLEVPSGLVEAAQAMGATPQQIV 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  +           + S ++     G +          I    ++     
Sbjct: 146 TKVLLPEALPGIINAITITLVTLVSYSAMAGTVGGGGLGDVG------IRYGYQRFDGTV 199

Query: 555 VVLGVLIMCCFVLAL 569
           +++ V+++   V  +
Sbjct: 200 MMITVVMLVILVQLI 214


>gi|332765936|gb|EGJ96146.1| binding--dependent transport system inner membrane component family
           protein [Shigella flexneri 2930-71]
 gi|333001260|gb|EGK20828.1| inner membrane ABC transporter permease protein yehW [Shigella
           flexneri VA-6]
          Length = 240

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 6   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 65

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 66  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 123

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 124 L----PILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 179

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 180 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 232

Query: 578 YLYGT 582
                
Sbjct: 233 QALSQ 237



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 47  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +       L  I   + EV++   +S  Q+   
Sbjct: 107 IGFGLQP--------AIIALILYGVLPILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLRK 158

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 159 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 211

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 212 QGALLVALAAIIADRLFERLVQALSQ 237


>gi|229494273|ref|ZP_04388036.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
 gi|229318635|gb|EEN84493.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
          Length = 265

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 67/179 (37%), Gaps = 10/179 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +I    IT+    V   +     + V         +     P A LL + P     P++V
Sbjct: 63  IIDNLFITLRDAGVGFAVGMTAALVVASIFVVSRTVEQTFMPVAMLLRSVPLVAMTPIIV 122

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                  +   + +++++ F      L  ++ G  A P   +++ +++  + W   R + 
Sbjct: 123 LIFGRGIVGVTVMVAIVVFF----PALVMIMVGLRAAPAQAQDLIAAYGGSRWTALRMVS 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +P   P     A  +  GA   +++ E    G       GLG+ + ++  +  + E+  
Sbjct: 179 VPSALPAVFAAARVSVPGALIGALIGEWLGSGQ------GLGSSMIKAIPRYQYNELWA 231



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               + +    V A++   SR +    +P+  +++S+P++      V+ F     G  + 
Sbjct: 76  VGFAVGMTAALVVASIFVVSRTVEQTFMPVAMLLRSVPLVAMTPIIVLIFGRGIVGVTVM 135

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             +   F      +          L   P   +++  ++  S W     + VP ++P + 
Sbjct: 136 VAIVVFFPALVMIM--------VGLRAAPAQAQDLIAAYGGSRWTALRMVSVPSALPAVF 187

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
               +S+ G     +  E +  G       G+GS +  AI       +  
Sbjct: 188 AAARVSVPGALIGALIGEWLGSGQ------GLGSSMIKAIPRYQYNELWA 231


>gi|86138802|ref|ZP_01057374.1| probable ferric iron transport system permease protein [Roseobacter
           sp. MED193]
 gi|85824449|gb|EAQ44652.1| probable ferric iron transport system permease protein [Roseobacter
           sp. MED193]
          Length = 567

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 84/584 (14%), Positives = 179/584 (30%), Gaps = 62/584 (10%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASR 67
           R+   I  +   + +  ++ + L GI     P        +     ++   HSL      
Sbjct: 15  RLLSAILVIAICLTLAPVLRLFLEGITHQGHPSLALMRNVLAQPATLSALKHSLITAGFG 74

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI--------LDIMQSIPILGFLTFT 119
           T + +L     + L       L AK   +  +++P+        L   Q +     L  T
Sbjct: 75  TLVSLLLGAAFAFLVALT--NLRAKPALVFCLMIPMMIPPQITALSWTQIMGPSSVLLKT 132

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +     L   + + +    IF +    +  +  ++   L +IP+D+ E +R     G + 
Sbjct: 133 LGIAPPLGAPQPLYSPEGIIFLLGIQHMSIIFLTLRAGLRSIPQDVVEAARISGAKGLRT 192

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +W + +P ++P L     ++            M+ +      LP +       +    L 
Sbjct: 193 WWQVVMPLTLPSLAAGTAITFVTALGNFGIPAMLGIPAGYATLPTLVYQKLAGMGTTVLA 252

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
            +  ++L ML        ++ + +     K  L  +T                       
Sbjct: 253 EV--SILAMLIGAVAVAGIVLQRLCQSRQKLHLVGSTS---------------------- 288

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
                         + L   LG  R         +     V  M  +    +V    + +
Sbjct: 289 --------------RPLALPLGAARLPVEILLWAVVFAILVLPMFGLLATSLVPAYGVAL 334

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKI 418
            + ++     +               +        +   +I +P+   +  R   ++   
Sbjct: 335 RFDTVTLASWYEVLFRQPVTARALTNSFGLAAGASVALVMICLPLAWLMERRRTRLARLF 394

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPN-----LWLSLLMIFGTQWYILF-NVIAGA 472
                L  A P  V    ++  +             +W+  L      + ++F  V A  
Sbjct: 395 DSLLDLPYALPGVVLSIAMILLLIKLPFTEATLYGTIWIIFLAYLARFFAVMFRPVQASL 454

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
             F     E A S   + +R  R ++ P   P    GAI     A+N   VS +  W   
Sbjct: 455 KQFDPGMDEAAQSVGASLYRRLRDVVFPLSAPAAAAGAILVFLTAFNELTVSALL-WSSG 513

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
                 +   + +S E G    + + ++ +   ++AL +     
Sbjct: 514 TETLGVVIFNLDDSGETGMASALAMTIVFVVVVLMALIQVYSRR 557


>gi|324006498|gb|EGB75717.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 243

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       +  +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAGFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAGFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|149374636|ref|ZP_01892410.1| ABC-type proline/glycine betaine transport system, permease
           component [Marinobacter algicola DG893]
 gi|149361339|gb|EDM49789.1| ABC-type proline/glycine betaine transport system, permease
           component [Marinobacter algicola DG893]
          Length = 394

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 11/194 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R+    +  L  ++ +G   ++    +       +  +           Q         L
Sbjct: 137 RLSARRWLQLMLLVFVGGSWLVFLRGEGLE---SLSLVREFNARPDKFQQALWTHLALAL 193

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ IS    F  A    +S      L+  +  +Q+IP L      +     L       
Sbjct: 194 GAVAISAGLAFALALKMIRSPAWQRPLLGAVSFLQTIPSLAVFGLLIAPLSALSSALPFL 253

Query: 134 AELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +L         A+ A+    +  M  + + ++  +P  L + +R   ++  Q F+ L +
Sbjct: 254 QDLGIRGIGWAPALLALIAYSLLPMVRNTFVAITEVPESLADAARGMGMNEHQVFFQLKL 313

Query: 186 PFSMPGLVWNMMMS 199
           P ++P ++  + ++
Sbjct: 314 PLALPVIIEGVRIT 327



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 21/301 (6%)

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
           I        L A+ +    ++  + L   +L    +    +  L            +L +
Sbjct: 40  IVPGTGHGLLSALGWTGAGLVTGVLLATTVLSMVPVRRRYELLLGLIGLSLATMPLLLDV 99

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
           F   +      Y+  +  +            L ++     E   +L + + +  ML +F 
Sbjct: 100 FAALHLPEGSPYARSSVGAGF-------WSLLFLLSLMLIETLGRLSARRWLQLMLLVFV 152

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                    G   +S+  +       D         + +   +  + I++ +   + + +
Sbjct: 153 GGSWLVFLRGEGLESLSLVREFNARPDKFQQALWTHLALA--LGAVAISAGLAFALALKM 210

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW------------LSLLM 456
              P     +      L   P+   F L+++ +S                       L +
Sbjct: 211 IRSPAWQRPLLGAVSFLQTIPSLAVFGLLIAPLSALSSALPFLQDLGIRGIGWAPALLAL 270

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I  +   ++ N     +  P    + A    +   + +  + LP   P  + G       
Sbjct: 271 IAYSLLPMVRNTFVAITEVPESLADAARGMGMNEHQVFFQLKLPLALPVIIEGVRITTIQ 330

Query: 517 A 517
           A
Sbjct: 331 A 331


>gi|308186156|ref|YP_003930287.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308056666|gb|ADO08838.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 243

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 76/204 (37%), Gaps = 21/204 (10%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLT 117
            Q        +++A +++++       L   +RR G    P+++ +    Q+IP +  L 
Sbjct: 47  WQLTLAHLFLVITASLLAIVIGIGSGVLV--TRRAGRAFRPLMETIVAAGQTIPPVAVLA 104

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V                 A+ A+    +  +       + ++P    E++    +S W
Sbjct: 105 IAVPVMG--------FGAWPAVVALLLYGLLPILQGTLAGIDSVPASSREIAIGVGMSSW 156

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q+ W + +  + P ++  +  S       V+ +       + +    +GS + + +   +
Sbjct: 157 QRLWQIELALAAPVIIAGIRTS-------VIINIGTAAIASTVGAKSLGSPVIIGLSGFN 209

Query: 238 LLAILYAMLTMLGVIFLYDQLLFR 261
              ++   L +  +  + D+L  R
Sbjct: 210 TAYVIQGALLVALLAIVSDRLFER 233



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 75/242 (30%), Gaps = 18/242 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L +F+  ++  +          +               L    +F V+   ++A +I I
Sbjct: 10  WLVLFYGALLTLMPYSGPLFYRWFPELARPLYQQESFWQLTLAHLFLVITASLLAIVIGI 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLL----AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             G+ +          +P  + +       P      + V  + +      + L L  + 
Sbjct: 70  GSGVLV--TRRAGRAFRPLMETIVAAGQTIPPVAVLAIAVPVMGFGAWPAVVALLLYGLL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                     +AG  + P   +E+A    ++ W+    I L    P  + G  T+     
Sbjct: 128 PIL----QGTLAGIDSVPASSREIAIGVGMSSWQRLWQIELALAAPVIIAGIRTSVIINI 183

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578
             + ++         +    LG+ +       +   V+ G L++    +  +R     L 
Sbjct: 184 GTAAIA-------STVGAKSLGSPVIIGLSGFNTAYVIQGALLVALLAIVSDRLF-ERLQ 235

Query: 579 LY 580
            +
Sbjct: 236 RW 237


>gi|190150240|ref|YP_001968765.1| D-methionine transporter permease MetI [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307256967|ref|ZP_07538744.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307263579|ref|ZP_07545194.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915371|gb|ACE61623.1| D-methionine transport system permease protein MetI [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306864542|gb|EFM96448.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306871222|gb|EFN02951.1| D-methionine transport system permease protein metI [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 225

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T     +A +++++       LA          + RL  VL  +++I +S+P    L
Sbjct: 21  TLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLHQVLDVVINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVSKFYLPESLPILINGITLTL 162



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 14/212 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    V      T++      ++A ++ +P+G          I   P + 
Sbjct: 2   WDSFMQELTPQMWGLVGTSTLETLYMGFAATLLAVVVGLPIGFLAFLTGKGEILENPRLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVVINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P    E A S   T W+      LP   P  + G           S ++     G 
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVSKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGG 179

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +       G +      K     +++ ++++ 
Sbjct: 180 LGNLAISYGEHRNMVYVKWISTIIIVAIVMIS 211


>gi|225350847|ref|ZP_03741870.1| hypothetical protein BIFPSEUDO_02421 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158303|gb|EEG71545.1| hypothetical protein BIFPSEUDO_02421 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 337

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 94  FTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF-LNTILYVVVGAGGATLLAIMGGYGL 152

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +  +L    W  ++    + + +   
Sbjct: 153 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLM 212

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A       +R +  + LP + P  VT A+      W N  +   +
Sbjct: 213 WIFSDQAVPTELLEAARVDGAGEFRTFFQVSLPLLAPGIVTTALFTIVATWNNYFLPLIM 272

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 273 LKDSNWYPLTIGLNQWKDQASTAG 296



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 125 RWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 184

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R      ++ F+
Sbjct: 185 LFAKLNLTNTP----WAMIIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFF 240

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 241 QVSLPLLAPGIVTTALFTIVATWN 264


>gi|257465660|ref|ZP_05630031.1| D-methionine transport system permease protein MetI [Actinobacillus
           minor 202]
 gi|257451320|gb|EEV25363.1| D-methionine transport system permease protein MetI [Actinobacillus
           minor 202]
          Length = 225

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T      A ++S++       LA          + RL  VL  +++I +S+P    L
Sbjct: 21  TLETIYMGFVATLLSVVVGLPIGFLAFLTGKGEILENARLHQVLDVVINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LIVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPAGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVTKFYLPESLPILINGITLTL 162



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 44/163 (26%), Gaps = 14/163 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +N  T Q    V      T++   V  +++ ++ +P+G          I     + 
Sbjct: 2   WDNFMNELTPQMWQLVASSTLETIYMGFVATLLSVVVGLPIGFLAFLTGKGEILENARLH 61

Query: 416 SKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      V  P     V          + L +     +  L      
Sbjct: 62  QVLDVVINIGRSVPFIILLIVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
               P    E A S   T W+      LP   P  + G     
Sbjct: 120 LLEIPAGLTEAAKSMGATNWQVVTKFYLPESLPILINGITLTL 162


>gi|325497943|gb|EGC95802.1| putative transport system permease protein [Escherichia fergusonii
           ECD227]
          Length = 243

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  +      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGSIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L +I   + EV++   +S  Q+   
Sbjct: 110 MG--------FGQQPAIIALILYGVLPVLQATLAGLGSIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|254822450|ref|ZP_05227451.1| ABC transporter, permease protein [Mycobacterium intracellulare
           ATCC 13950]
          Length = 228

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +VI L           ++R    +      ++ +IP L          + +  G  I
Sbjct: 23  LVPVVIGLAIALPLGLAVQRTRIARTLTTAAASVVFTIPSLALF-----VVLPMIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I A+       +  ++ ++L  +P    + + +       +   + +P ++P L
Sbjct: 78  LDEANVIVALTAYTAALLVRAVLEALDAVPAQTRDAAVAVGYPPITRIVKVDLPLAVPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +        VV +  +V   +VI + G+GS+     +      IL  ++ +  + 
Sbjct: 138 IAGLRV-------VVVTNIAMVSVGSVIGIGGLGSWFTQGYQTDKSDQILAGIIALFALA 190

Query: 253 FLYDQLL 259
            + D L+
Sbjct: 191 VVIDVLI 197



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 8/204 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+    +    WL  + +   +V ++I   I +P+G+ +       +     A ++   P
Sbjct: 2   HYLLTHLDDAWWLTIVHLRLSLVPVVIGLAIALPLGLAVQRTRIARTLTTAAASVVFTIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F ++   +    L+    +  L  +     ++  V+    A P   ++ A +    
Sbjct: 62  SLALFVVLPMIIGTRILDEANVIVALTAYTAA-LLVRAVLEALDAVPAQTRDAAVAVGYP 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P  + G             V  V   G       GLG++  +  + 
Sbjct: 121 PITRIVKVDLPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIG-------GLGSWFTQGYQT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
               +++ G++ +    + ++  +
Sbjct: 174 DKSDQILAGIIALFALAVVIDVLI 197


>gi|254796836|ref|YP_003081673.1| phosphate ABC transporter, permease protein PstA [Neorickettsia
           risticii str. Illinois]
 gi|254590061|gb|ACT69423.1| phosphate ABC transporter, permease protein PstA [Neorickettsia
           risticii str. Illinois]
          Length = 397

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 62/147 (42%), Gaps = 8/147 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V +L        + +L +  I +L        +++S  +  VL   ++ + S P + F  
Sbjct: 175 VGALIGSLYTVFVSLLVSFFIGVLTALWLGEYSSRSS-ITRVLEVSINNLSSTPPIVFGI 233

Query: 118 FTVVY---FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             + +   F+ L     +   L   F +F   V     S   ++ ++P ++++ + +   
Sbjct: 234 LGLTFYINFLGLPRSSSLVGGLTLAFIMFPILVT----SSLHAIRSVPDNIKQAAFALGA 289

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           S  Q   +  +P SMPG++   ++ ++
Sbjct: 290 SKVQVILHHVLPISMPGIMTGTILGIA 316



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFP 435
           ++     +++ V V ++++  I +   +W+G    R  I+  ++     L++ P  VF  
Sbjct: 174 IVGALIGSLYTVFVSLLVSFFIGVLTALWLGEYSSRSSITRVLEVSINNLSSTPPIVFGI 233

Query: 436 LVVSCVSYYHLNPNLWLSL--LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    +   P     +  L +    + IL  + +    + P++ K+ A +   +  +
Sbjct: 234 LGLTFYINFLGLPRSSSLVGGLTLAFIMFPILVTSSLHAIRSVPDNIKQAAFALGASKVQ 293

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
              + +LP   P  +TG I         S    +  
Sbjct: 294 VILHHVLPISMPGIMTGTILGIARILGESAPLLMIG 329


>gi|220919226|ref|YP_002494530.1| phosphate ABC transporter, inner membrane subunit PstC
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957080|gb|ACL67464.1| phosphate ABC transporter, inner membrane subunit PstC
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 336

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 16/206 (7%)

Query: 76  MVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMN 125
             +S+L +      AA        RRL  VL P+++++  IP  +LGF    V+  +  +
Sbjct: 116 TAVSMLVSVPVGIAAALYASEFAPRRLREVLKPVIELLAGIPSVVLGFFALMVMATWLQS 175

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        + A   +  + +  +      +L  +PR   E S +   + W+  + + +
Sbjct: 176 AFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQAVPRAYREASLALGATRWETAFRVIL 235

Query: 186 PFSMPGLVWNMMM----SMSGGWFFVVAS--EMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           P + PG++  +++    S+      ++AS    I        +  + + IA  + E    
Sbjct: 236 PAAAPGVLAGVVLGFGRSIGETMIVLMASGNAAITSWSLGDSVRTLPATIAAEMGEVVFG 295

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIV 265
              Y++L  +GV       +   +  
Sbjct: 296 GAHYSVLFFIGVELFLFTFVLNALAA 321



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 15/176 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
             + +Q V  V     I +F   + +  ++ ++ +PVGI             +   ++P 
Sbjct: 90  PGYMWQPVSGVPKYSMIPLFVGTLKVTAVSMLVSVPVGIAAALYASEFAPRRLREVLKPV 149

Query: 422 AQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
            +LLA  P+ V     +  ++        +    N  ++ L +  T   ++F V      
Sbjct: 150 IELLAGIPSVVLGFFALMVMATWLQSAFGFTFRLNAVVAGLGLALTVIPVIFTVSEDALQ 209

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           A P  ++E + +   T W     +ILP   P  + G +   G +   +++  +AS 
Sbjct: 210 AVPRAYREASLALGATRWETAFRVILPAAAPGVLAGVVLGFGRSIGETMIVLMASG 265


>gi|323494310|ref|ZP_08099422.1| phosphate ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323311473|gb|EGA64625.1| phosphate ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 309

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 84/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 31  KERIFHGLFLTSAVIGIVSLAVIAYFIVKESIPAFQEAGVSGIVLGQDWLPPALYGVATM 90

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +  L A+V+ +    + A   A+   +R+  ++ P ++++  IP + +    L  
Sbjct: 91  IVASVVSTLGAVVVGVPIGVLTAIYIAEIAPKRVADIIRPAVELLAGIPSVVYGFFGLVI 150

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 151 IVPLIQNIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIF 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 211 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 248



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 15/176 (8%)

Query: 374 QDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    VV  + A ++ +P+G+             ++  I+P  +LLA
Sbjct: 77  QDWLPPALYGVATMIVASVVSTLGAVVVGVPIGVLTAIYIAEIAPKRVADIIRPAVELLA 136

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 137 GIPSVVYGFFGLVIIVPLIQNIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRT 196

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +KE + +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 197 YKEGSLALGASKIFTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 252


>gi|238757279|ref|ZP_04618466.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           aldovae ATCC 35236]
 gi|238704657|gb|EEP97187.1| Inner membrane ABC transporter permease protein yehW [Yersinia
           aldovae ATCC 35236]
          Length = 205

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 75  AMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + +I++           +S  +    V+  ++ + Q+ P +  L   V            
Sbjct: 19  SSIIAIFIGVSAGIAVTRSAGKEYRSVVETVVAMGQTFPPVAVLAIAVPVMG-------- 70

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            +E  AI A+    +  +       + ++ R + EV+    +S  Q    + +P + P +
Sbjct: 71  FSEKPAIIALVLYGLLPILQGTIAGVESVSRGIHEVAEGVGMSTRQILLQVELPLAAPVI 130

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  +  S+        A+    VG        +GS I + +   +   ++   + +  + 
Sbjct: 131 VAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAIIVALLA 183

Query: 253 FLYDQLLFRPMIVWSNK 269
            + D +  R    WS +
Sbjct: 184 IITDMIFER----WSQR 196



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 13/192 (6%)

Query: 395 IIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           IIA  I +  GI +         S ++    +   FP      + V  + +      + L
Sbjct: 21  IIAIFIGVSAGIAVTRSAGKEYRSVVETVVAMGQTFPPVAVLAIAVPVMGFSEKPAIIAL 80

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L  +      IL   IAG  +      EVA    ++  +    + LP   P  V G  T
Sbjct: 81  VLYGLL----PILQGTIAGVESVSRGIHEVAEGVGMSTRQILLQVELPLAAPVIVAGIRT 136

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           +       + ++         + T  LG+ I       +   V+ G +I+    +  +  
Sbjct: 137 SVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAIIVALLAIITDMI 189

Query: 573 LWHPLYLYGTRC 584
                       
Sbjct: 190 FERWSQRLSRWR 201


>gi|158425835|ref|YP_001527127.1| putative sugar uptake ABC transporter permease [Azorhizobium
           caulinodans ORS 571]
 gi|158332724|dbj|BAF90209.1| putative sugar uptake ABC transporter permease [Azorhizobium
           caulinodans ORS 571]
          Length = 323

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T     +A  ISL+ +   A    + R  G   V +   +  +  P + F+   
Sbjct: 114 PHWLWNTLYVSFAATFISLVTSVFAAYAIERLRFHGSRWVGLGIFLAYLVPPSILFIPLA 173

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F        +   L     +     W +         +IP +LEE +     S WQ 
Sbjct: 174 LMVFKIGIYDTKLALILTYPTFLVPFSTWLLM----GYFRSIPYELEECALVDGASRWQI 229

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P S+PGL+   + S +  W   + +   +       +P G+ + +  +   +  
Sbjct: 230 LTKILLPLSVPGLISAGIFSFTLSWNEFIYALTFIQSSENKTVPVGVLTELVRSDVYEWG 289

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A++  L V+ LY   +
Sbjct: 290 SLMAGALIGSLPVVILYSFFV 310



 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 14/167 (8%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            I Y++   TY   L+       T++       I+ +  +     I       S+     
Sbjct: 103 HIKYLLFETTYPHWLWN------TLYVSFAATFISLVTSVFAAYAIERLRFHGSRWVGLG 156

Query: 423 QLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA---SAFPN 477
             LA    P+ +F PL +        +  L    L++    + + F+         + P 
Sbjct: 157 IFLAYLVPPSILFIPLALMVFKIGIYDTKLA---LILTYPTFLVPFSTWLLMGYFRSIPY 213

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + +E A     + W+    I+LP   P  ++  I +   +WN  I +
Sbjct: 214 ELEECALVDGASRWQILTKILLPLSVPGLISAGIFSFTLSWNEFIYA 260


>gi|153808290|ref|ZP_01960958.1| hypothetical protein BACCAC_02578 [Bacteroides caccae ATCC 43185]
 gi|149129193|gb|EDM20409.1| hypothetical protein BACCAC_02578 [Bacteroides caccae ATCC 43185]
          Length = 291

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 77/196 (39%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRT 68
           S+++   IF LL+  +V+ +  IL   I + +       I     D      +      T
Sbjct: 13  SQKLAFGIFRLLSLCIVLILFAILGFIIYKGSGAISWEFITSAPTDGMRGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  G    S  +I +  T       IW   +  F ++V    +++   
Sbjct: 28  IVLILFAILGFIIYKGSGAISWEFITSAPTDGMRGGGIWPAIVGTFYLMVG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G           +   I+     L+  P+ VF  F + +        +  L  S
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGS 144

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|15894983|ref|NP_348332.1| phosphate permease [Clostridium acetobutylicum ATCC 824]
 gi|15024671|gb|AAK79672.1|AE007680_5 Phosphate permease [Clostridium acetobutylicum ATCC 824]
 gi|325509120|gb|ADZ20756.1| Phosphate permease [Clostridium acetobutylicum EA 2018]
          Length = 296

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 73/163 (44%), Gaps = 6/163 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T+  + A+++S       A        +    VL P L++   IP +  G++  TV+  
Sbjct: 80  STMVSIGAVILSTPMAIALAVFMNIISPKLGDRVLKPSLELFVGIPSVVYGWIGVTVLVP 139

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  + G V  +  A I  +    +  +      ++ N+  +  E S     + WQ  + 
Sbjct: 140 FIKNHFGGVGFSLGAGILVLSIMILPTIASLSSDAIKNVHNEYIEGSYGLGATRWQTIYK 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           + +P S  G++  +++ ++  +   +A +M+ +G+TV    G+
Sbjct: 200 IIIPSSKNGILTGIVLGLARAFGEALAVQMV-IGNTVKSAQGL 241



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 70/192 (36%), Gaps = 14/192 (7%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-----FRPHI- 414
           +    ++++     D         I +    ++ I A I+  P+ I +        P + 
Sbjct: 51  YSIFDFLMSSTWKPDSKTPKLGAFIFLEGSTMVSIGAVILSTPMAIALAVFMNIISPKLG 110

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV 468
              ++P  +L    P+ V+  + V+ +       +  +  +L   +L++       + ++
Sbjct: 111 DRVLKPSLELFVGIPSVVYGWIGVTVLVPFIKNHFGGVGFSLGAGILVLSIMILPTIASL 170

Query: 469 I-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                    N++ E +     T W+    II+P      +TG +     A+  ++  ++ 
Sbjct: 171 SSDAIKNVHNEYIEGSYGLGATRWQTIYKIIIPSSKNGILTGIVLGLARAFGEALAVQMV 230

Query: 528 SWGHIHLRTTGL 539
             G+      GL
Sbjct: 231 -IGNTVKSAQGL 241


>gi|56478171|ref|YP_159760.1| phosphate ABC transporter, permease protein [Aromatoleum aromaticum
           EbN1]
 gi|56314214|emb|CAI08859.1| Phosphate ABC transporter, permease protein [Aromatoleum aromaticum
           EbN1]
          Length = 319

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 18/239 (7%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           F PL  + +   + L   +    E  L   +   V   + I W  V              
Sbjct: 15  FEPLRVSDRLARKALRHTKERVIEALLFGAAGVSVLTTVGIVWVLVSESYHFFTVVPIWS 74

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQ 419
           ++ +           +     +   +   ++A ++ IP+G  I        RP +   ++
Sbjct: 75  FLTDTMWTPLFADAHYGILPLLAGTLTTSLVALVVAIPLGTTIAIYLSEFARPAVREAVK 134

Query: 420 PFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           PF +LL   P+ V+         PL+   +        L   ++M      Y+       
Sbjct: 135 PFLELLGGIPSIVYGYFALIVVIPLLQLLIPGLPGFNMLGAGIVMGIAIIPYVSSLAEDA 194

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT----GAITACGGAWNASIVSEV 526
             A P   +E + +   T ++    +++P      ++    G   A G     ++ + +
Sbjct: 195 MRAVPMSMREGSYAMGGTKFQTAVRVVIPAALSGILSAYILGISRAVGETMIVAVAAGM 253



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 55/151 (36%), Gaps = 10/151 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF- 115
                     L+  +++L+      T  A          +   + P L+++  IP + + 
Sbjct: 90  YGILPLLAGTLTTSLVALVVAIPLGTTIAIYLSEFARPAVREAVKPFLELLGGIPSIVYG 149

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   +     L PG      L A   +  + +  ++     ++  +P  + E S + 
Sbjct: 150 YFALIVVIPLLQLLIPGLPGFNMLGAGIVMGIAIIPYVSSLAEDAMRAVPMSMREGSYAM 209

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             + +Q    + +P ++ G++   ++ +S  
Sbjct: 210 GGTKFQTAVRVVIPAALSGILSAYILGISRA 240


>gi|194289014|ref|YP_002004921.1| glycine betaine/carnitine/choline transporter inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|193222849|emb|CAQ68852.1| putative glycine betaine/carnitine/choline transport system inner
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 238

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 66/177 (37%), Gaps = 15/177 (8%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            L    + +         V  D++           L          ++ +M ++L     
Sbjct: 8   ALAWAGLTLATLAALVAWVGVDVIRQY-----QERLLYDVVDHLRLVVLSMALALATGIP 62

Query: 86  YATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
                ++   RR    L+ + ++  ++P         +  + L    +   E  AI A++
Sbjct: 63  AGIALSRPCMRRWADRLMQVFNVGNTVPS--------LAVLALALAVLGIGERPAILALW 114

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            + +  +  + Y+ L N+   L E +R   ++  Q+   + +P ++P ++  + +++
Sbjct: 115 LASLLPIVRNTYEGLRNVSPTLLEAARGIGMTPGQRLVRVELPNALPVMLAGIRIAL 171



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 8/169 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                G+ +      + ++      Q    +++     +  VV+ + +A    IP GI +
Sbjct: 8   ALAWAGLTLATLAALVAWVGVDVIRQYQERLLYDVVDHLRLVVLSMALALATGIPAGIAL 67

Query: 409 G---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
                R      +Q    +    P+     L ++ +            L +   +   I+
Sbjct: 68  SRPCMRRWADRLMQ-VFNVGNTVPSLAVLALALAVLGIGER----PAILALWLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            N   G         E A    +T  +    + LP   P  + G   A 
Sbjct: 123 RNTYEGLRNVSPTLLEAARGIGMTPGQRLVRVELPNALPVMLAGIRIAL 171


>gi|153008795|ref|YP_001370010.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151560683|gb|ABS14181.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 566

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 79/586 (13%), Positives = 168/586 (28%), Gaps = 73/586 (12%)

Query: 22  LLAFVLVIGIINILLHG--IQETTVPRDIVDIVPI--TLDVHSLPQYASRTTLRMLSAMV 77
           ++   L++ ++++L  G  + E   P+       +  TL   S       +    +   +
Sbjct: 15  IIGVTLIVAVLSLLPMGRLLVELVAPQGQFSTSALVETLGSQSTWVATWHSLQIGIGGAL 74

Query: 78  ISLLFTFVYATLAAKSRRLGM------VLVPILDIMQSIPILGFLTFT--------VVYF 123
           ++L+F  V A L   +   G        + P+L I   +  L +L           ++  
Sbjct: 75  LALVFGIVAALLVGLTNMRGRNVFVLFYVTPLL-IAPQVTALAWLQLFGPSSQFLKIIGM 133

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                 +     +  I  +   Q   + F  +   L  +PR+L E   S   S W     
Sbjct: 134 APPLGSRNPLYSVWGIIFLLGVQYGPLVFLIVRAGLRKLPRELVEAGLSAGASKWTVLRT 193

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P   P ++    ++                  + +   GI +++ +      L  ++
Sbjct: 194 IILPLMTPSIIGAAALAF----------------VSCVGNFGIPAFLGIPSNYLVLPTLI 237

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
           Y  L   G   L                            S ++ L            S 
Sbjct: 238 YQRLAGGGPAVL----------------------SSVAVLSVLIGLIAMAGIAAQEYASR 275

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
              F  +S ++      LG  R         L        ++ +    +V    + + + 
Sbjct: 276 RRDFRIVSTSLPAAPFALGRWRVLVEAAAWLLIVIVLFLPLIGLTLSALVPAYGVPLTFA 335

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +       F   +          +    +     A +I +P+   + +R    +   P  
Sbjct: 336 TATAENFRFVLLEHAGAARAFRNSAVLSLAAAFFAVLIAVPLAYMLAWRKRRWT---PIL 392

Query: 423 QLLAAFP----------ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAG 471
              A  P          A +   L    V    L   LW+ L       + +     +AG
Sbjct: 393 NFAAEMPYALPGVVLAIACLLMFLKPLPVVGVSLYNTLWIILFAYLARFFVLALRPTVAG 452

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                   +E A       +   R II P + P  + G +     A+    VS +  W  
Sbjct: 453 LHQIDRALEEAARVAGAGLFYRLRTIIFPLVAPATLAGGVLIFMTAFCELTVSALL-WAS 511

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                  +     ++ +      + +  + +   ++         L
Sbjct: 512 GSETLGVVMFSFEQAGDSAYAAAISILAVAVTFMLMLATNLFARRL 557


>gi|91223286|ref|ZP_01258552.1| phosphate ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269965338|ref|ZP_06179458.1| phosphate ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|91192099|gb|EAS78362.1| phosphate ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269829984|gb|EEZ84213.1| phosphate ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 310

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      
Sbjct: 32  KERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVAT 90

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S    ++       L A        +RL  ++ P ++++  IP + +    L 
Sbjct: 91  MIVASIVSTAGAVIVGVPIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLV 150

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V     ++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 151 IIVPLIQKVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKI 210

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 211 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 75/230 (32%), Gaps = 24/230 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV--------- 379
               ++   +R+ + L +    +       IA+  +   +  F    V  +         
Sbjct: 24  REKRRVDWKERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP 83

Query: 380 -IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV 432
            ++     +   +V    A I+ +P+G+             ++  I+P  +LLA  P+ V
Sbjct: 84  ALYGVATMIVASIVSTAGAVIVGVPIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVV 143

Query: 433 F--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +         PL+         N  L   +++       ++        A P  +KE + 
Sbjct: 144 YGFFGLVIIVPLIQKVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSL 203

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 204 ALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 253


>gi|83859332|ref|ZP_00952853.1| probable phosphate ABC transporter, permease protein (PstA)
           [Oceanicaulis alexandrii HTCC2633]
 gi|83852779|gb|EAP90632.1| probable phosphate ABC transporter, permease protein (PstA)
           [Oceanicaulis alexandrii HTCC2633]
          Length = 581

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           + L M+  M++++      A      A   RL   +   ++ + ++P + F    +  F+
Sbjct: 362 SILTMIVTMLLAVPIGVGAAIYLEEFAPKNRLTDFIEVNINNLAAVPSIVFGLLGLAVFI 421

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    A L     +    +  +  S   +L  +P  + E +     S  Q  ++  
Sbjct: 422 NLF-GMPRSAPLVGGMVLALMTLPTVIISARAALKAVPPSIREAALGVGASRTQAVFHHV 480

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 481 LPLAMPGILTGSIIGLAQA 499



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 10/160 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +I+  ++ +P+G+              ++  I+     LAA P+ VF  L ++    
Sbjct: 363 ILTMIVTMLLAVPIGVGAAIYLEEFAPKNRLTDFIEVNINNLAAVPSIVFGLLGLAVFIN 422

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               P    L   +++   T   ++ +  A   A P   +E A     +  +   + +LP
Sbjct: 423 LFGMPRSAPLVGGMVLALMTLPTVIISARAALKAVPPSIREAALGVGASRTQAVFHHVLP 482

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
              P  +TG+I     A   +    +            LG
Sbjct: 483 LAMPGILTGSIIGLAQALGETAPLLMIGMVAFIADPPTLG 522


>gi|99080384|ref|YP_612538.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99036664|gb|ABF63276.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 568

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 90/583 (15%), Positives = 182/583 (31%), Gaps = 86/583 (14%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM-----LSAM 76
           LL+ +LV+ ++  L   ++         D +        L + A+ + L+          
Sbjct: 17  LLSLILVLAVVLTLAPVVRLFVEGLTAGDQLNFGFFAEVLQKPATLSALKHSLVTAGLGT 76

Query: 77  VISLLFTFVYATLAAKSRRLGM------VLVPILDIMQSIPILGF---LTFTVVYFMNLY 127
            +SLL    +A L A +           +++P++ I   I  L +   +  + V+   L 
Sbjct: 77  ALSLLIGGCFAFLVALTDLRRKGALVFCLMIPMM-IPPQITALSWTQIMGPSSVFLKTLG 135

Query: 128 PGKVIGAE------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               +GA          I  +       +  ++   L  IP+D+ E +R     G++ + 
Sbjct: 136 LAPPLGAPQPLYSPAGIILLLGIQHTSIIFLTLRAGLRAIPQDVVEAARVSGAKGFRIWA 195

Query: 182 YLGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAI 233
            + +P ++P L+  + ++   + G F + A   I  G   +       L G+G+ +    
Sbjct: 196 QVVLPLTLPSLLAGVAITFVTALGNFGIPAMLGIPAGYATLPTLIYQRLAGMGTTVL--- 252

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293
                 A +  + T++GV+ +   LL R                            +   
Sbjct: 253 ------AEVAVLATLIGVVAIAGILLQR--------------------------FCQSRQ 280

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
            +  +G S      PL           G  R         + +   V  M  +    +V 
Sbjct: 281 RVHLVGGSGRALSIPL-----------GKARLPIEIALWSVIATILVLPMAGLLATSLVP 329

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP- 412
              + +   ++ +   H               +    +    +   + +P+   +     
Sbjct: 330 AYGVPLRLDTLSFEGWHEALFRQPVTQRAFVNSFGLSLGAAALLMALCLPLAWLMERHKT 389

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP-----NLWLSLLMIFGTQWYILF- 466
            +         L  A P  V    ++  +             +W+  +      + ++F 
Sbjct: 390 RLGRVFDSLLDLPYALPGVVLAIAMILLLINLPFTDVTLYGTIWIIFIAYLARFFAVMFR 449

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            V +          E A +     WR  R IILP   P    GAI     A+N   VS +
Sbjct: 450 PVQSSLRQLDPAMDEAAQAVGAPLWRRLRDIILPLSAPSAAAGAILVFLTAFNELTVSAL 509

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                       LG  I    + G         + +   V+ L
Sbjct: 510 LWSSGTET----LGVVIFNLDDSGETVMASAVAMTIVFVVMIL 548



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   + AG  A P D  E A      G+R W  ++LP   P  + G       A     +
Sbjct: 164 IFLTLRAGLRAIPQDVVEAARVSGAKGFRIWAQVVLPLTLPSLLAGVAITFVTALGNFGI 223

Query: 524 SEVASWGHIHLRTTGLGAYI---AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +      +     L         +T       +   + ++    + L RF
Sbjct: 224 PAMLGIPAGYATLPTLIYQRLAGMGTTVLAEVAVLATLIGVVAIAGILLQRF 275


>gi|325957159|ref|YP_004292571.1| ABC-type phosphate transport system, permease [Lactobacillus
           acidophilus 30SC]
 gi|325333724|gb|ADZ07632.1| ABC-type phosphate transport system, permease [Lactobacillus
           acidophilus 30SC]
          Length = 291

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 75/209 (35%), Gaps = 12/209 (5%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT-MFRVVVLI 394
           ++    +   ++ +   + I + + +   + +       + L V   G     F  + L+
Sbjct: 5   KKKDRFMTGLFYLIGWIMLIFLVYLTCTILFDGLKGFKPEFLGVAGNGIFNQFFNTIYLV 64

Query: 395 IIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYH 445
            ++ ++ +P+GI  G             + ++   + L++ P+ V   F  +   +    
Sbjct: 65  FLSLLVSVPIGIGAGVYLAEYAKKGKFLTMLEICIESLSSLPSIVIGLFGYLAFILWTGM 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               +  +L +   +   I         A P ++KE +     T     R +++P   P 
Sbjct: 125 SWNIIAGALTISILSIPLITTETNDAIQALPIEYKEGSLGLGATKSETIRKVLIPAAMPQ 184

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHL 534
            +TG I A G  +  +      S    ++
Sbjct: 185 ILTGVIMAAGRGFGEAAALLYTSGQSTYV 213



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 61/156 (39%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L  +   ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKKGKFLTMLEICIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    +A    I    +  +T     ++  +P + +E S     +  +    + 
Sbjct: 120 LW--TGMSWNIIAGALTISILSIPLITTETNDAIQALPIEYKEGSLGLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|313897387|ref|ZP_07830930.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           HGF2]
 gi|312957757|gb|EFR39382.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           HGF2]
          Length = 415

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           AK  RL  ++   ++++  +P  I G +   V++ +    G      L   F +    + 
Sbjct: 225 AKPNRLTSLIRSAIEMLTGVPSIIFGLMGVAVLFPITQLFGATTTNILLGSFTMSIILLP 284

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +  S  ++L  +P+ L + S S   +  Q  + + +P ++PG++  +++S+ 
Sbjct: 285 TIIRSTEEALIVVPQSLRDASLSVGANQSQTIFKVVLPCAVPGILTGVLLSIG 337



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 413 HISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            ++S I+   ++L   P+ +F        FP+             L  S  M       I
Sbjct: 229 RLTSLIRSAIEMLTGVPSIIFGLMGVAVLFPITQLF--GATTTNILLGSFTMSIILLPTI 286

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG------GAW 518
           + +        P   ++ + S      +    ++LP   P  +TG + + G       A 
Sbjct: 287 IRSTEEALIVVPQSLRDASLSVGANQSQTIFKVVLPCAVPGILTGVLLSIGRVIGESAAL 346

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAE--STEKGSFPEVVLGVLIMCCFVLALN 570
             ++ + V     +  + T L  +I    S+E+ +F       +++  FVL LN
Sbjct: 347 IYTMGTYVNDTPTLMSQGTSLAVHIYNIMSSEQPNFELASAISIVILVFVLILN 400


>gi|90580996|ref|ZP_01236797.1| putative ABC-type metal ion transport system,permease component
           [Vibrio angustum S14]
 gi|90437874|gb|EAS63064.1| putative ABC-type metal ion transport system,permease component
           [Vibrio angustum S14]
          Length = 228

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPI 112
           L +   +T   +  + +I  +       +   ++         +  +L  I++I +SIP 
Sbjct: 20  LIEALGQTLTMVFVSGLIGFVIGIPLGVILHLTKKNGLLENTTINNILGIIVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  IP  L E ++S 
Sbjct: 79  FIILLVAIIPFTRFVVGSSIGT-AAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             + +Q    + +P ++PG++  + +++
Sbjct: 138 GATPFQIIQKVLLPEALPGIINAVTITL 165



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 55/150 (36%), Gaps = 12/150 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V V  +I  +I IP+G+ +             I++ +     +  + P  +   + 
Sbjct: 27  TLTMVFVSGLIGFVIGIPLGVILHLTKKNGLLENTTINNILGIIVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P+   E A S   T ++  
Sbjct: 86  IIPFTRFVVGSSIGTAAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSMGATPFQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
           + ++LP   P  +           + S ++
Sbjct: 146 QKVLLPEALPGIINAVTITLVTLVSYSAMA 175


>gi|149913037|ref|ZP_01901571.1| hypothetical protein RAZWK3B_03575 [Roseobacter sp. AzwK-3b]
 gi|149813443|gb|EDM73269.1| hypothetical protein RAZWK3B_03575 [Roseobacter sp. AzwK-3b]
          Length = 555

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 11/145 (7%)

Query: 119 TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           T+V+   +       +I  +   I A+    +  M   MY  +  IP+     ++S   +
Sbjct: 403 TLVWLGLVDDASRLVMINNQFGTIVAMTHILLPFMILPMYSVMSTIPQTYVRAAKSLGAT 462

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W  FW +  P S+PG+    ++       + +  E++            G++I+  I  
Sbjct: 463 NWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTT--------GTFISNRIAY 514

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF 260
               ++ + +   LG I L   L+ 
Sbjct: 515 HISSSLNWGLAAALGSILLVAVLVL 539



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +  S  P  +   A S   T 
Sbjct: 404 LVWLGLVDDASRLVMINNQFGTIVAMTHILLPFMILPMYSVMSTIPQTYVRAAKSLGATN 463

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 464 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 523

Query: 551 SFPEVVLGVLIMCCFVL 567
                +  +L++   VL
Sbjct: 524 -LAAALGSILLVAVLVL 539


>gi|29831690|ref|NP_826324.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29608806|dbj|BAC72859.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 215

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 63/201 (31%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++     V   +  +S   G +       + ++P L  +  
Sbjct: 12  QQLLTDAYQHASAVFQCMVVATAIGVVVGVVTYRSEWAGNLATTTTSTILTMPSLAMIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          + A+    +  +  +    L  +   L + +    +S   
Sbjct: 72  LIPVVGLGVPP--------TVIALTLYGLLPIVRNAIVGLRGVDPSLVDAATGIGMSRAA 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   +     
Sbjct: 124 RLLRVELPLAWPPVLTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGLASLGS 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L  +L     I +   L 
Sbjct: 177 KNALNQVLAGTIGIIILALLF 197



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+ I + VG+         +        +   P+     L++  V        
Sbjct: 25  VFQCMVVATAIGVVVGVVTYRSEWAGNLATTTTSTILTMPSLAMIGLLIPVVGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A+   ++       + LP  +P  +TG
Sbjct: 85  IALTLYGLL----PIVRNAIVGLRGVDPSLVDAATGIGMSRAARLLRVELPLAWPPVLTG 140

Query: 510 AITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              +     G A  A+  S       I      LG+       K +  +V+ G + +   
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNEIFRGLASLGS-------KNALNQVLAGTIGIIIL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|148257284|ref|YP_001241869.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409457|gb|ABQ37963.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           BTAi1]
          Length = 285

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 9/187 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+  +L  +A  T    L+  VI +L     A        L   L+P +   QSIPIL  
Sbjct: 76  LNPRNLLTHAWVTISATLAGFVIGVLLGIALAVAIVHVNALRRSLMPWIVASQSIPILAI 135

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +V   ++    ++   + + +  F    + +T  M + L +    L ++ R++  S
Sbjct: 136 APIIIVALGSVGIVGLLPKAVISAYLSF----FPVTIGMVKGLTSPDAMLLDLMRTYNAS 191

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q F  L  P ++P L  ++ +S+S      +  E+           GIG+ +      
Sbjct: 192 RTQTFAKLRWPAAVPLLFASLKVSISISLVGAIVGELPTGAQA-----GIGARLLSGSYY 246

Query: 236 QDLLAIL 242
              + I 
Sbjct: 247 GQTVQIW 253



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/263 (9%), Positives = 87/263 (33%), Gaps = 13/263 (4%)

Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353
               I    +    P++ ++ +L R  G+   +     L+         ++   +   + 
Sbjct: 4   LTAIILAMWYLACLPMNRDLPQLARVEGLANRYEVAWGLERPVLPAPHQIIGELYASTIG 63

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
              +  +   +     +      + +       +  V++ I +A        + I     
Sbjct: 64  TRLLRESADGLVLNPRNLLTHAWVTISATLAGFVIGVLLGIALA--------VAIVHVNA 115

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
           +   + P+     + P     P+++  +    +   L  +++  + + + +   ++ G +
Sbjct: 116 LRRSLMPWIVASQSIPILAIAPIIIVALGSVGIVGLLPKAVISAYLSFFPVTIGMVKGLT 175

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           +      ++  +++ +  + +  +  P   P        +   +   +IV E+ +     
Sbjct: 176 SPDAMLLDLMRTYNASRTQTFAKLRWPAAVPLLFASLKVSISISLVGAIVGELPTGAQ-- 233

Query: 534 LRTTGLGAYIAESTEKGSFPEVV 556
               G+GA +   +  G   ++ 
Sbjct: 234 ---AGIGARLLSGSYYGQTVQIW 253


>gi|89896665|ref|YP_520152.1| hypothetical protein DSY3919 [Desulfitobacterium hafniense Y51]
 gi|89336113|dbj|BAE85708.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 225

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T   ++++ +++ L       +         + +  +   L  +++I +S P 
Sbjct: 17  LVPATGETLYMVIASTLLAYLLGVPLGVILVISSPDHISPNPWIERTLGTVINIFRSAPF 76

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +  L   ++       G  IG + A +  +F +  + +   +  SL  IP  + E + S 
Sbjct: 77  IVLL-IVLIPVTQAIMGTYIGTDAAIVPLVFATAPF-VARMVESSLKEIPYGVIEAALSM 134

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S WQ    + +P +   L+    ++        ++          I   G+G      
Sbjct: 135 GSSPWQIIRKVLLPEAKASLILGAAIT-------TISVVGYTAMAGTIGAGGLGDVAIRY 187

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
            + +    ++   + +L +I    QL 
Sbjct: 188 GQHRFRTDVMIMTVIILVIIVQLVQLF 214



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 74/205 (36%), Gaps = 19/205 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V+   ++A ++ +P+G+         I   P I   +     +  + P  V   ++
Sbjct: 24  TLYMVIASTLLAYLLGVPLGVILVISSPDHISPNPWIERTLGTVINIFRSAPFIVLLIVL 83

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +   ++  +  +  L+ F T  ++   V +     P    E A S   + W+  
Sbjct: 84  IPVTQAIMGTYIGTDAAIVPLV-FATAPFVARMVESSLKEIPYGVIEAALSMGSSPWQII 142

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP      + GA          + ++         +   GLG       +     +
Sbjct: 143 RKVLLPEAKASLILGAAITTISVVGYTAMA-------GTIGAGGLGDVAIRYGQHRFRTD 195

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYL 579
           V++  +I+   ++ L +     L  
Sbjct: 196 VMIMTVIILVIIVQLVQLFGTKLAR 220


>gi|302544840|ref|ZP_07297182.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462458|gb|EFL25551.1| proline/glycine betaine ABC transporter, permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 213

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 58/170 (34%), Gaps = 15/170 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++  LL     A +A + R L  VL+ + +++ +IP +      +              
Sbjct: 29  AVLFGLLIAVPLAVIAHRVRPLRGVLLGLSNVLFTIPSIAIFVLLLPITGL--------T 80

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
              AI  +    +  +  +  + L ++P    E S +      +    + +P + P ++ 
Sbjct: 81  RTTAITGLTIYTLTVLLRNTVEGLDSVPAKAREASTAMGARPLRTLLTVELPLAFPVIMA 140

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            + +S       V  +  I  G       G+G       +      ++  
Sbjct: 141 GVRVSSVMAISLVSVASYIGYG-------GLGQLFTDGFQRNYPTPVVAG 183



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 63/172 (36%), Gaps = 11/172 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   V  ++   +I +P+ +       +   +   + +L   P+     + V  +    L
Sbjct: 23  LSTAVPAVLFGLLIAVPLAVIAHRVRPLRGVLLGLSNVLFTIPSIA---IFVLLLPITGL 79

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                ++ L I+ T   +L N + G  + P   +E +++      R    + LP  FP  
Sbjct: 80  TRTTAITGLTIY-TLTVLLRNTVEGLDSVPAKAREASTAMGARPLRTLLTVELPLAFPVI 138

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           + G   +   A +   V+    +G       GLG    +  ++     VV G
Sbjct: 139 MAGVRVSSVMAISLVSVASYIGYG-------GLGQLFTDGFQRNYPTPVVAG 183


>gi|297627485|ref|YP_003689248.1| PROZ-like protein (ABC-type glycine betaine transport, permease
           protein) [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296923250|emb|CBL57846.1| PROZ-like protein (ABC-type glycine betaine transport, permease
           protein) [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 226

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 11/178 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++A ++ +P G+ IG        +  F+    A PA     +V        + P + L
Sbjct: 37  ATLVAVVLGVPTGLAIGHTGRGRQLVVGFSGAARALPAIGLLTMVALIAGIGLIGPLVAL 96

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +L +      ++    +G  +     ++ A +  ++  +    + LP   P  V G   
Sbjct: 97  VVLAVPS----VIAGAYSGIDSIEPVTRDAARAMGMSPMQVLWQVELPLALPQLVGGVRA 152

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           A       + ++     G       GLG  +    +   +P+++ G  ++      ++
Sbjct: 153 AALQVIATATLAAYVGAG-------GLGVLLFRGLKTQDYPQMLAGSAVVVALAFLVD 203



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 71/182 (39%), Gaps = 15/182 (8%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A +++++           + R   ++V      +++P +G LT   +       G ++  
Sbjct: 37  ATLVAVVLGVPTGLAIGHTGRGRQLVVGFSGAARALPAIGLLTMVALIAGIGLIGPLVAL 96

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            + A+ ++            Y  + +I     + +R+  +S  Q  W + +P ++P LV 
Sbjct: 97  VVLAVPSVIAGA--------YSGIDSIEPVTRDAARAMGMSPMQVLWQVELPLALPQLVG 148

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +          V+A+  +      +   G+G  +   +K QD   +L     ++ + FL
Sbjct: 149 GVR----AAALQVIATATLAA---YVGAGGLGVLLFRGLKTQDYPQMLAGSAVVVALAFL 201

Query: 255 YD 256
            D
Sbjct: 202 VD 203


>gi|300936558|ref|ZP_07151467.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|222033890|emb|CAP76631.1| Inner membrane ABC transporter permease protein yehW [Escherichia
           coli LF82]
 gi|300458321|gb|EFK21814.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|312946747|gb|ADR27574.1| putative transporter subunit [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 243

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  +      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGSIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L +I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGSIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|126664595|ref|ZP_01735579.1| phosphate ABC transporter, permease protein [Marinobacter sp.
           ELB17]
 gi|126630921|gb|EBA01535.1| phosphate ABC transporter, permease protein [Marinobacter sp.
           ELB17]
          Length = 425

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  M+++L  +F     AA          +L   +   ++ + ++P + F    +  F+N
Sbjct: 211 LLTMLVTLAISFPVGIAAAVYLEEFAPQNKLTDFIEVNINNLAAVPSIIFGLLGLAVFIN 270

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L+ G      +     +    +  +  S   ++ ++P  + E +     S  Q   +  V
Sbjct: 271 LF-GMPRSVPVVGGLVLALMTLPTIIISSRAAIKSVPPSIREAAEGVGASKMQVVLHHVV 329

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ M+  
Sbjct: 330 PLAMPGMLTGSIIGMAQA 347



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 77/208 (37%), Gaps = 22/208 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +++   I  PVGI              ++  I+     LAA P+ +F  L ++    
Sbjct: 211 LLTMLVTLAISFPVGIAAAVYLEEFAPQNKLTDFIEVNINNLAAVPSIIFGLLGLAVFIN 270

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               P    +   L++   T   I+ +  A   + P   +E A     +  +   + ++P
Sbjct: 271 LFGMPRSVPVVGGLVLALMTLPTIIISSRAAIKSVPPSIREAAEGVGASKMQVVLHHVVP 330

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGA---------YIAESTEKG 550
              P  +TG+I     A   +    +       +    GL +         Y+  S+ + 
Sbjct: 331 LAMPGMLTGSIIGMAQALGETAPLLLIGMVAFIVDVPDGLFSSATVLPVQIYLWASSSEQ 390

Query: 551 SFPEVV-LGVLIMCCFVLALNRF-LWHP 576
            F E+    ++++  F++ +N   +W  
Sbjct: 391 GFVELASAAIMVLLTFMIIMNALAIWLR 418


>gi|86149928|ref|ZP_01068157.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839746|gb|EAQ57006.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 362

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GIPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 265 LPLAMPMILTGSILTLAGA 283



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--- 433
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F   
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              + ++       +  +    L I  +   I+ +  A   +   + K  A +  +T  +
Sbjct: 200 GLGVFINLFGIPRSSALVGGLTLAIM-SLPIIIVSTKAALKSVDINMKNAAYALGMTKVQ 258

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
             + I+LP   P  +TG+I    GA
Sbjct: 259 MVKGIMLPLAMPMILTGSILTLAGA 283


>gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
 gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
          Length = 473

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 57/137 (41%), Gaps = 2/137 (1%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPI 112
           I  +   L +   RT L  + +  I+ +F  +     A+ ++ L  +    +DI++ IP+
Sbjct: 263 IQQNGGELLKGLGRTLLLTIISFAIATIFGVILGLFNASPNKVLNWIATIYVDILRGIPL 322

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +  L F + + +  +    I A +A +  +  +    +   +   +  +     E SRS 
Sbjct: 323 IV-LAFFIYFSIPQFLSIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLEASRSL 381

Query: 173 RLSGWQKFWYLGVPFSM 189
            L+       + +P ++
Sbjct: 382 GLTYNTSMRKVVLPQAV 398



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 24/199 (12%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGF-----RPHISSKIQPFAQLLAAFP--ANVFFP- 435
              + R ++L II+  I    G+ +G         ++     +  +L   P     FF  
Sbjct: 271 LKGLGRTLLLTIISFAIATIFGVILGLFNASPNKVLNWIATIYVDILRGIPLIVLAFFIY 330

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             +       +   +   + +   T  YI   V  G  A      E + S  +T     R
Sbjct: 331 FSIPQFLSIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLEASRSLGLTYNTSMR 390

Query: 496 YIILPGI----FPYYVTGAITACGGAWNASIVS--EVASWGHIHLRTTGLGAYIAESTEK 549
            ++LP       P ++   +         S++   E+   G I          IA +   
Sbjct: 391 KVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKII---------IARTYSS 441

Query: 550 GSFPEVVLGVLIMCCFVLA 568
           G    +++G++ +    + 
Sbjct: 442 GDM-WLIVGLMYIIIITIL 459


>gi|306814756|ref|ZP_07448918.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli NC101]
 gi|305852150|gb|EFM52602.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli NC101]
 gi|320195997|gb|EFW70621.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli WV_060327]
          Length = 243

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|225352633|ref|ZP_03743656.1| hypothetical protein BIFPSEUDO_04259 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156827|gb|EEG70221.1| hypothetical protein BIFPSEUDO_04259 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 336

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF-LNTILYVVVGAGGATLLAIMGGYGL 151

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +  +L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     + +R +  + LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSEQAVPTELLEAARVDGASEFRTFFQVSLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 272 LKDSNWYPLTIGLNQWKDQASTAG 295



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R    S ++ F+
Sbjct: 184 LFAKLNLTNTP----WAMIIPSLVSTFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFF 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QVSLPLLAPGIVTTALFTIVATWN 263


>gi|50365327|ref|YP_053752.1| spermidine/putrescine ABC transporter permease component
           [Mesoplasma florum L1]
 gi|50363883|gb|AAT75868.1| spermidine/putrescine ABC transporter permease component
           [Mesoplasma florum L1]
          Length = 331

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 101/260 (38%), Gaps = 12/260 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +      + ++ II I+   +     P   + +  I+L+         ++ 
Sbjct: 52  FTKGKVWPILLPFFIVMTLLVIIPIISIVVYSIVQPSGDLKMFEISLEKFIRLFKNGNIM 111

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                T      A V+ +L  +  A +   S     +L   + ++ ++P+   +   V+ 
Sbjct: 112 MSMGLTIAYAFIASVMCILLGYPIALIM--SEMKSKILAKNMWLLVTMPMWISMLLKVLG 169

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +L+       +G ++A I  +    +      +Y SL +  RD+EE +     S ++ 
Sbjct: 170 LRSLFLIMAPSALGTQIAIIIGMTYMFIPFAITPIYDSLDSRRRDIEEAAMDLGCSKYKT 229

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  SMPG++  + + +      ++  + +  G   +    I SY           
Sbjct: 230 FWGVTLRSSMPGVITAITLVLLQAATSLIVVQYMGNGKINLITSIIESYFFKGSDFGFGA 289

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           AI   +  M+ ++ +  +  
Sbjct: 290 AISVVLAAMVFLLMMVSKFF 309



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 71/200 (35%), Gaps = 5/200 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++    +T+    +  ++  ++  P+ + +            +  +      ++   ++ 
Sbjct: 110 IMMSMGLTIAYAFIASVMCILLGYPIALIMSEMKSKILAKNMWLLVTMPMWISMLLKVLG 169

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-----AGASAFPNDFKEVASSFHITGWRW 493
               +  + P+   + + I     Y+              +   D +E A     + ++ 
Sbjct: 170 LRSLFLIMAPSALGTQIAIIIGMTYMFIPFAITPIYDSLDSRRRDIEEAAMDLGCSKYKT 229

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +  + L    P  +T        A  + IV +    G I+L T+ + +Y  + ++ G   
Sbjct: 230 FWGVTLRSSMPGVITAITLVLLQAATSLIVVQYMGNGKINLITSIIESYFFKGSDFGFGA 289

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            + + +  M   ++ +++F 
Sbjct: 290 AISVVLAAMVFLLMMVSKFF 309


>gi|300867014|ref|ZP_07111684.1| phosphate ABC transporter, inner membrane subunit PstC
           [Oscillatoria sp. PCC 6506]
 gi|300334997|emb|CBN56850.1| phosphate ABC transporter, inner membrane subunit PstC
           [Oscillatoria sp. PCC 6506]
          Length = 318

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 25/244 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  ++ G I      +    VP  +   + ++ D   LP    RTTL +    +++ + +
Sbjct: 78  ALPMIYGTIVSSAIALF-LAVPLGVGTAIFLSEDFLPLP---IRTTL-VFLVELLAAIPS 132

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
            VY         L  ++ P+   +      G+L F            V    L A   + 
Sbjct: 133 VVYGLWGIY--VLIPLIKPVGQFLNG--SFGWLPF-------FSTPPVGPGMLPAGIVLA 181

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +T     SL ++P +L + S     S W   + + VP +  G+V  +M+ +   
Sbjct: 182 IMTLPIITAISRDSLASLPPELRQASLGLGASRWTTIFRVLVPAAFSGIVGGIMLGLGRA 241

Query: 204 WFFVVASEMIVVGDTVIPL----PG--IGSYIALAIKE---QDLLAILYAMLTMLGVIFL 254
               +A+ +++     + L    PG  I S +A    E     + A++YA L +  +  +
Sbjct: 242 MGETMAATLLIGNSNQLSLSLLAPGNTIASLLANQFAEASGLQVAALMYAGLILFALTLI 301

Query: 255 YDQL 258
            + L
Sbjct: 302 VNIL 305



 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           +  +   AI +       +       +    + +    +F V +L  I S+++   GI++
Sbjct: 83  YGTIVSSAIALFLAVPLGVGTAIFLSEDFLPLPIRTTLVFLVELLAAIPSVVYGLWGIYV 142

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
                +   I+P  Q L    +  + P   +      + P     +++   T   I    
Sbjct: 143 -----LIPLIKPVGQFLNG--SFGWLPFFSTPPVGPGMLP---AGIVLAIMTLPIITAIS 192

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               ++ P + ++ +     + W     +++P  F   V G +   G A   ++ + +  
Sbjct: 193 RDSLASLPPELRQASLGLGASRWTTIFRVLVPAAFSGIVGGIMLGLGRAMGETMAATLLI 252

Query: 529 WGHIHLRTTGL 539
                L  + L
Sbjct: 253 GNSNQLSLSLL 263


>gi|291302413|ref|YP_003513691.1| phosphonate ABC transporter inner membrane subunit [Stackebrandtia
           nassauensis DSM 44728]
 gi|290571633|gb|ADD44598.1| phosphonate ABC transporter, inner membrane subunit [Stackebrandtia
           nassauensis DSM 44728]
          Length = 588

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 83/571 (14%), Positives = 182/571 (31%), Gaps = 56/571 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIV-------DIVPITLDV-HSLPQYASRTTLRML 73
           ++  +LV G+ ++   GI   T+   +           P++           ++T   ++
Sbjct: 34  VVGVLLVFGLWSLNYLGINFATLADSVSNGIEFVSRATPLSFPPLGETAVLIAQTLAIVI 93

Query: 74  SAMVISLLFTFVYATLAAKSRR----LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           SA ++S++ +   A  AA +        +    ++ + ++IP +      V  F      
Sbjct: 94  SATLLSMVLSAPLAFWAAANTSPNIAARLGSRGVIVVARAIPDIVLAIIFVRIFGLGILP 153

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            V+   L +I  I              ++  I        R+   +  Q+     +P  +
Sbjct: 154 GVLAMGLHSIGMIGKM--------YGDAIEQIDEGPRTALRAAGATRRQQLIGGVLPQVL 205

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P  V   M  +            I V    + + GIG  I  A++       L   L +L
Sbjct: 206 PAFVATAMHRLDINLR-------ISVLLGYVGVAGIGKEIKDAVESLQYRRALALALIIL 258

Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK--TNFLRFIGYSSWNFFS 307
            +I +        +I  + +  L    G  P+    + LFR                  +
Sbjct: 259 VLIIIM------ELISGAVRKMLLGPAGAEPSRFGFVRLFRWIGRKLTGRRPKEEVKVPA 312

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW-QSIGY 366
           P         R      F     F  +     ++ +  ++      G+  G+ +  ++  
Sbjct: 313 PRGAVAVASQRISPPWTFRRIRRFTYMLLGLAIAGVSVVYVVVDFTGIGGGVGFIDTMSR 372

Query: 367 IVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGF----RPHISSKIQPF 421
           +    T    +  +W     T    +  ++I  ++ +PVG            I+   + F
Sbjct: 373 LWPPGTGGVAMSELWFSLFETFVIAMAALVIGLVLALPVGCLAARNVAPNSVIAKIFRIF 432

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDF 479
              +   P  V   L V  V    +     L++  + + G        V           
Sbjct: 433 IVCVRGVPELVLAILFVIIVGLGTVAGAFALAIGAIGLLGKL------VADSLEEVDPGV 486

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           ++   +   +  R +    LP   P ++   +      + A+ +  +   G       G+
Sbjct: 487 EQALRATGASRVRVFFAATLPQALPAFIGHILYQLDVNFRAATILGIVGSG-------GI 539

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           G Y+ +++    F  V    L++   V+ + 
Sbjct: 540 GYYLLQASRVREFETVTTITLMIFGVVMTIE 570


>gi|302529978|ref|ZP_07282320.1| predicted protein [Streptomyces sp. AA4]
 gi|302438873|gb|EFL10689.1| predicted protein [Streptomyces sp. AA4]
          Length = 234

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +          ++ A+VI+L+           + R G+VLV + + ++++P LG +T
Sbjct: 18  PAGILARLVEHVGYVVLALVIALVIAIPIGLFVGHTGRGGVVLVGVGNAIRALPTLGLVT 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F  + F       +IG  + AI  +            Y  L     D+ + ++   ++GW
Sbjct: 78  FLFLLFTESTTATIIGLVVLAIPPVLA--------GTYAGLQAAEHDVVDAAQGIGMTGW 129

Query: 178 QKFWYLGVPFSMPGLVWNMMMSM 200
           Q+ W + VP ++P ++  +  ++
Sbjct: 130 QRLWQVEVPIALPLVLGGIRNAV 152



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 11/198 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +Q    ++      +  VV+ ++IA +I IP+G+++G        +      + A P   
Sbjct: 15  WQGPAGILARLVEHVGYVVLALVIALVIAIPIGLFVGHTGRGGVVLVGVGNAIRALPTLG 74

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
               +    +       + L +L I      +L    AG  A  +D  + A    +TGW+
Sbjct: 75  LVTFLFLLFTESTTATIIGLVVLAIP----PVLAGTYAGLQAAEHDVVDAAQGIGMTGWQ 130

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + +P   P  + G   A       + V+     G +            +      +
Sbjct: 131 RLWQVEVPIALPLVLGGIRNAVLQLIATAAVAAYVGLGGLGRFL-------LDGLAILDY 183

Query: 553 PEVVLGVLIMCCFVLALN 570
            EVV G ++     + ++
Sbjct: 184 TEVVAGAILTALLAIVVD 201


>gi|268680476|ref|YP_003304907.1| phosphate ABC transporter inner membrane subunit PstA
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618507|gb|ACZ12872.1| phosphate ABC transporter, inner membrane subunit PstA
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 389

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 57/139 (41%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ++  M I+     + A      A   R   ++   ++ + +IP + F    +  F+
Sbjct: 174 TVLTVIVTMAIAFPIGVMTAIYLEEFAPDNRFTQIIEVNINNLAAIPSILFGLLGLAIFI 233

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    + L     +    +  +  S   +L ++P  + +      L+ WQ      
Sbjct: 234 NFF-GVPRSSPLVGGMTLALMCLPVIIVSSKAALKSVPSSIRQAGFGLGLTKWQIVRDHV 292

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++S++  
Sbjct: 293 LPLAMPGIMTGSIISIAHA 311



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 12/145 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--- 433
             ++   V+ +I+   I  P+G+               +  I+     LAA P+ +F   
Sbjct: 168 YASIVGTVLTVIVTMAIAFPIGVMTAIYLEEFAPDNRFTQIIEVNINNLAAIPSILFGLL 227

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              + ++       +P +    L +      I+ +  A   + P+  ++      +T W+
Sbjct: 228 GLAIFINFFGVPRSSPLVGGMTLALMC-LPVIIVSSKAALKSVPSSIRQAGFGLGLTKWQ 286

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
             R  +LP   P  +TG+I +   A
Sbjct: 287 IVRDHVLPLAMPGIMTGSIISIAHA 311


>gi|163789824|ref|ZP_02184261.1| phosphate ABC transporter, permease protein [Carnobacterium sp.
           AT7]
 gi|159875046|gb|EDP69113.1| phosphate ABC transporter, permease protein [Carnobacterium sp.
           AT7]
          Length = 306

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 13/214 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L + V++  F    A             VL P+++++  IP + +    LT  V 
Sbjct: 89  SFLVTLLSAVLATPFAIGAAIFMTEISPSTGKKVLQPVVELLVGIPSVVYGFIGLTVVVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++ G   G  L++ F +F   +  +T     +L ++PR   E S +   + WQ  +
Sbjct: 149 VVRSVFGGTGFGI-LSSTFVLFVMILPTVTSMAVDALNSVPRYYREASLAMGATRWQTIY 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE 235
            + +  +MPGL+  ++  M+  +   +A +M++    ++      P   + S + +++  
Sbjct: 208 KVVLRSAMPGLLTAVVFGMARAFGEALAVQMVIGNAALMPTSLVTPASTLTSILTMSMGN 267

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             +  +   +L  L +I +   L F  +  W  K
Sbjct: 268 TVMGTLENNVLWSLALILMIMALFFNILTRWIGK 301



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 416 SKIQPFAQLLAAFPANVF------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             +QP  +LL   P+ V+        + V    +      +  S  ++F      + ++ 
Sbjct: 121 KVLQPVVELLVGIPSVVYGFIGLTVVVPVVRSVFGGTGFGILSSTFVLFVMILPTVTSMA 180

Query: 470 A-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
               ++ P  ++E + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 181 VDALNSVPRYYREASLAMGATRWQTIYKVVLRSAMPGLLTAVVFGMARAFGEALAVQMVI 240

Query: 529 WGHIHLRTT 537
                + T+
Sbjct: 241 GNAALMPTS 249


>gi|330470492|ref|YP_004408235.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
 gi|328813463|gb|AEB47635.1| binding-protein-dependent transport systems inner membrane
           component [Verrucosispora maris AB-18-032]
          Length = 240

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 71/206 (34%), Gaps = 8/206 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +   +            +A+++  L  +        + R G ++V + ++  ++P L  
Sbjct: 18  TNPGGVLDRLGEHVTISAAAVLLGCLVAWPLGLWLGHAGRGGGLVVLVSNVTLAVPTLAL 77

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           LT   + F+      V+ A               +  + Y  +  +     E +R   ++
Sbjct: 78  LTILPLTFLGFGRPAVVVALAVFAVP-------PLLANAYTGVRQVDPQTREAARGMGMT 130

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G Q    + +P ++P L      +         A    V G  +  +  +G  +++A+  
Sbjct: 131 GPQVLRQVELPLAIPYLAAGFRTAAVQV-VATAALATFVNGGGLGEIIRLGFGLSIAVGG 189

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261
             +LA    +  +     L   L+ R
Sbjct: 190 GQILAGGLLVAGLAVSAELIFGLVER 215



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 6/205 (2%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ ++ +   + +   V+      +      +++  ++  P+G+W+G        +   
Sbjct: 6   QAVVWLNDPLNWTNPGGVLDRLGEHVTISAAAVLLGCLVAWPLGLWLGHAGRGGGLVVLV 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      ++      +     +    +        +L N   G        +E
Sbjct: 66  SNVTLAVPTLALLTILPLTFLGFGRPAVVVALAVFAVP---PLLANAYTGVRQVDPQTRE 122

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    +TG +  R + LP   PY   G  TA       + ++   + G +      LG 
Sbjct: 123 AARGMGMTGPQVLRQVELPLAIPYLAAGFRTAAVQVVATAALATFVNGGGLGEIIR-LGF 181

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFV 566
            ++ +   G    +  G+L+    V
Sbjct: 182 GLSIAVGGGQI--LAGGLLVAGLAV 204


>gi|237785017|ref|YP_002905722.1| phosphate ABC transporter permease [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237757929|gb|ACR17179.1| phosphate ABC transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 313

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T ++ L    +S+    +  T     A   RLG V   ++DI+  +P +    F    ++
Sbjct: 99  TLIQALITSALSIPIGVLTGTYLVEYAGQSRLGKVTTFMVDILTGVPSIVAALFIYSLWV 158

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+  +  G  +A   A+    V  +  +  + L  +P+DL E + +  +  W+    + 
Sbjct: 159 VLFGFERSG--MAVSLALVLLMVPVIIRNTEEMLRVVPQDLREAAYALGVPKWKTIARIV 216

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +M G++  +M+S+ 
Sbjct: 217 LPTAMSGIITGIMLSVG 233



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 19/195 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT----------MFR 389
           ++ +L      V     + + W+ +                 +G I           +  
Sbjct: 39  MARVLVFATVIVAFIPLLWVLWELVSRGAAVTLSSTWWMKSQMGIIESQAGGGAYHAIMG 98

Query: 390 VVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSC 440
            ++  +I S + IP+G+  G           +         +L   P+     F   +  
Sbjct: 99  TLIQALITSALSIPIGVLTGTYLVEYAGQSRLGKVTTFMVDILTGVPSIVAALFIYSLWV 158

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V +      + +SL ++      I+ N        P D +E A +  +  W+    I+LP
Sbjct: 159 VLFGFERSGMAVSLALVLLMVPVIIRNTEEMLRVVPQDLREAAYALGVPKWKTIARIVLP 218

Query: 501 GIFPYYVTGAITACG 515
                 +TG + + G
Sbjct: 219 TAMSGIITGIMLSVG 233


>gi|164687356|ref|ZP_02211384.1| hypothetical protein CLOBAR_00997 [Clostridium bartlettii DSM
           16795]
 gi|164603780|gb|EDQ97245.1| hypothetical protein CLOBAR_00997 [Clostridium bartlettii DSM
           16795]
          Length = 221

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 82/201 (40%), Gaps = 18/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L     +T   ++   +I+ +  F+ A +           ++ +  V+  +++I++S P 
Sbjct: 15  LGDAFLQTMYMIIVPTIIATILGFILAIILVLTKPKGLKPNKYVYSVVGFVVNIVRSFP- 73

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG E AAI  I       +   +  +L  +   L E ++SF
Sbjct: 74  FIILLVALIPFTRFLIGTSIG-ETAAIVPITIGAAPFIARIIENALNEVDEGLIEAAKSF 132

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY-IAL 231
             +  Q  + + +  +MP ++  + +S       V++          +   G+G   +  
Sbjct: 133 GATKTQIIFKVMIKEAMPSIISGITLS-------VISILGYTAMAGTVGAGGLGKVALVY 185

Query: 232 AIKEQDLLAILYAMLTMLGVI 252
             +  D   ++Y ++T++ V+
Sbjct: 186 GHQRFDTAVMIYVVITLVIVV 206



 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 71/199 (35%), Gaps = 20/199 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           TM+ ++V  IIA+I+   + I +            ++ S +     ++ +FP  +   + 
Sbjct: 22  TMYMIIVPTIIATILGFILAIILVLTKPKGLKPNKYVYSVVGFVVNIVRSFPFIILL-VA 80

Query: 438 VSCVSYYHLNPNLW---LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++      + +  G   +I   +    +       E A SF  T  +  
Sbjct: 81  LIPFTRFLIGTSIGETAAIVPITIGAAPFIARIIENALNEVDEGLIEAAKSFGATKTQII 140

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFP 553
             +++    P  ++G   +       + ++     G       GLG   +    ++    
Sbjct: 141 FKVMIKEAMPSIISGITLSVISILGYTAMAGTVGAG-------GLGKVALVYGHQRFDTA 193

Query: 554 EVVLGVLIMCCFVLALNRF 572
            ++  V+ +   V A+   
Sbjct: 194 VMIYVVITLVIVVQAIQML 212


>gi|77918271|ref|YP_356086.1| phosphate ABC transporter permease [Pelobacter carbinolicus DSM
           2380]
 gi|77544354|gb|ABA87916.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Pelobacter carbinolicus DSM 2380]
          Length = 532

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 60/150 (40%), Gaps = 22/150 (14%)

Query: 76  MVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + I  LF+F    LAA       +   +  ++   ++ +  IP + +  F + +F+    
Sbjct: 291 IFIMSLFSFPLGVLAAVYLREYAREGLIVRLVRIAVNNLAGIPSIVYGIFGLAFFVYGIG 350

Query: 129 GKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G +                G  L A   +    V  +  +  ++L  IP  + E S +  
Sbjct: 351 GSIDRMFFPEQLPTPTFGTGGILWASLTLSLLTVPVVIVATEEALGAIPAGVREGSLALG 410

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +Q    + +P + PG++  ++++M+  
Sbjct: 411 ATKFQTLTRILLPMASPGIMTGLILAMARA 440



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 26/157 (16%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVFFPLVVS 439
           +F  V+LI I S+   P+G+         ++     +L       LA  P+ V+    ++
Sbjct: 284 IFGTVMLIFIMSLFSFPLGVLAAVYLREYAREGLIVRLVRIAVNNLAGIPSIVYGIFGLA 343

Query: 440 CVSY-------------------YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              Y                   +     LW SL +   T   ++        A P   +
Sbjct: 344 FFVYGIGGSIDRMFFPEQLPTPTFGTGGILWASLTLSLLTVPVVIVATEEALGAIPAGVR 403

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E + +   T ++    I+LP   P  +TG I A   A
Sbjct: 404 EGSLALGATKFQTLTRILLPMASPGIMTGLILAMARA 440


>gi|215487350|ref|YP_002329781.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312967419|ref|ZP_07781634.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 2362-75]
 gi|215265422|emb|CAS09823.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312287616|gb|EFR15521.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 2362-75]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGQQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  +      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGSIDASVTEVAKGMGMSCSQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L +I   + EV++   +S  Q+   
Sbjct: 110 IG--------FGQQPAIIALILYGVLPVLQATLAGLGSIDASVTEVAKGMGMSCSQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|187778879|ref|ZP_02995352.1| hypothetical protein CLOSPO_02474 [Clostridium sporogenes ATCC
           15579]
 gi|187772504|gb|EDU36306.1| hypothetical protein CLOSPO_02474 [Clostridium sporogenes ATCC
           15579]
          Length = 307

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 66/159 (41%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPISIALAIFINYISPKLGEKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +     +  G  + A   + +  +     S+   ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYEGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISK 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKNGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + GVA+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGVAVFSKGVSLKEFLFSTNWSPDKDVPKFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PISIALAIFINYISPKLGEKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYEGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISKVIVPSAKNGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|269127837|ref|YP_003301207.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
 gi|268312795|gb|ACY99169.1| binding-protein-dependent transport systems inner membrane
           component [Thermomonospora curvata DSM 43183]
          Length = 242

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + +  +   +  L  + I L          A+ RRL   ++    ++ ++P +      V
Sbjct: 25  IAEALTEHLILSLVPVAIGLAVALPLGIACARWRRLYPPVLAATSVLYAVPAIALFVVLV 84

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +    Y           I  +    +  +   +   L ++P  + + + +      ++ 
Sbjct: 85  AFTGLTY--------ATVIIPLAAYTLSVLVPGVVDGLRSVPDHVRQAAEAMGFGPVRRL 136

Query: 181 WYLGVPFSMPGLVWNMMMS 199
             + +P ++P ++  + ++
Sbjct: 137 VQVELPLAVPVVMAGLRVA 155



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V + I   + +P+GI       +   +     +L A PA   F   V  V++  L    
Sbjct: 37  LVPVAIGLAVALPLGIACARWRRLYPPVLAATSVLYAVPAIALF---VVLVAFTGLTYAT 93

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L  + T   ++  V+ G  + P+  ++ A +      R    + LP   P  + G 
Sbjct: 94  VIIPLAAY-TLSVLVPGVVDGLRSVPDHVRQAAEAMGFGPVRRLVQVELPLAVPVVMAGL 152

Query: 511 ITAC 514
             A 
Sbjct: 153 RVAA 156


>gi|300744242|ref|ZP_07073261.1| proline/glycine betaine ABC transporter, permease protein [Rothia
           dentocariosa M567]
 gi|300379967|gb|EFJ76531.1| proline/glycine betaine ABC transporter, permease protein [Rothia
           dentocariosa M567]
          Length = 248

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 72/194 (37%), Gaps = 11/194 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++  ++ +   +Q    ++      +   V  + IA +I +P+G+W G        +  F
Sbjct: 6   RTFAFLGDGANWQGSQGILARTVEHLGITVFAVAIALVIAVPLGLWAGHTRRGGHALLGF 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A PA     L+        + P     ++++      +L + +   +    D  +
Sbjct: 66  TAALRALPALGLLTLLALWFGVNAIPP----LVVLVIIAVAPLLAHTLEAVTGIDPDVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +  R + +P   P ++ G  +A       + ++   +  +       LG 
Sbjct: 122 AARAQGMTEGQILRRVEIPLGLPVFMGGLRSAVLQVIATATIAAYINGNN-------LGR 174

Query: 542 YIAESTEKGSFPEV 555
           Y+ +      +P +
Sbjct: 175 YLFDGLAVRDYPRM 188



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 64/183 (34%), Gaps = 15/183 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +           + A+ I+L+        A  +RR G  L+     ++++P LG LT 
Sbjct: 21  QGILARTVEHLGITVFAVAIALVIAVPLGLWAGHTRRGGHALLGFTAALRALPALGLLTL 80

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             ++F       +          +    V  +     +++  I  D+ + +R+  ++  Q
Sbjct: 81  LALWFGVNAIPPL--------VVLVIIAVAPLLAHTLEAVTGIDPDVVDAARAQGMTEGQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P  +P  +  +  ++         +  I   +       +G Y+   +  +D 
Sbjct: 133 ILRRVEIPLGLPVFMGGLRSAVLQVIATATIAAYINGNN-------LGRYLFDGLAVRDY 185

Query: 239 LAI 241
             +
Sbjct: 186 PRM 188


>gi|317131250|ref|YP_004090564.1| phosphate ABC transporter, inner membrane subunit PstA
           [Ethanoligenens harbinense YUAN-3]
 gi|315469229|gb|ADU25833.1| phosphate ABC transporter, inner membrane subunit PstA
           [Ethanoligenens harbinense YUAN-3]
          Length = 299

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 6/163 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS---RRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T   ++ +++IS           A+     RL   +   ++ + S+P +    F  +
Sbjct: 66  LFNTVYLVILSLLISTPIGICAGIYMAEYMQEGRLSSFIRTCIETLSSLPSIVVGLFGYL 125

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+ +          A   +I    +  +T +   +L  IP+  +E S     + WQ   
Sbjct: 126 VFLVMTHSSYNLVAGALAVSILNLPL--VTTTTEDALRAIPKYYKEGSLGIGATHWQTIA 183

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            + +P S+P ++  ++++  G  F   A+ + +VG       G
Sbjct: 184 RVLLPASIPRIITGVILA-GGRAFGEAAALLYIVGTGTDIRFG 225



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 6/185 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V Y +  F+  ++    I I ++  G      T      +      T++ V++ ++I++ 
Sbjct: 24  VLYGVAGFFLLLLGAFTIYILFRG-GRAAMILTAAHSTGIGAQLFNTVYLVILSLLISTP 82

Query: 400 IWIPVGIWIGFR---PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSL 454
           I I  GI++        +SS I+   + L++ P+ V   F  +V  V  +     +  +L
Sbjct: 83  IGICAGIYMAEYMQEGRLSSFIRTCIETLSSLPSIVVGLFGYLVFLVMTHSSYNLVAGAL 142

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +       +         A P  +KE +     T W+    ++LP   P  +TG I A 
Sbjct: 143 AVSILNLPLVTTTTEDALRAIPKYYKEGSLGIGATHWQTIARVLLPASIPRIITGVILAG 202

Query: 515 GGAWN 519
           G A+ 
Sbjct: 203 GRAFG 207


>gi|188494067|ref|ZP_03001337.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
 gi|188489266|gb|EDU64369.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 53638]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 17/249 (6%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           +   + L   +  ++  +       +  +               L     + V +  + A
Sbjct: 5   RDPPFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFA 64

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLS 453
            II    GI +       ++ +P  + +AA    FP      + V  + +      + L 
Sbjct: 65  VIIGTGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALI 122

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L  +      +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+
Sbjct: 123 LYGVL----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTS 178

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  + ++         +  + LG  I       +   V+ G L++    +  +R  
Sbjct: 179 VIINIGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLF 231

Query: 574 WHPLYLYGT 582
              +     
Sbjct: 232 ERLVQALSQ 240



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|221134923|ref|ZP_03561226.1| ABC phosphate transporter inner membrane protein, PstA-like protein
           [Glaciecola sp. HTCC2999]
          Length = 429

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTV 120
               +  M+++L+ +F     AA        K++   M+ V  ++ + ++P + F    +
Sbjct: 212 LTGTMLTMLVTLVLSFPLGVAAALYLEEFAPKNKWTDMIEV-NINNLAAVPSIIFGLLGL 270

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              +NL+        +  I       +  +  +   S+  +P  + E +     S  Q  
Sbjct: 271 AVIINLFGLPRSAPLVGGIVLTL-MTLPTIIIASRASIKAVPPSIREAATGLGASKIQTT 329

Query: 181 WYLGVPFSMPGLVWNMMMSMSGG 203
           +   +P +MPG++   ++ M+  
Sbjct: 330 FSHVLPMAMPGILTGTIIGMAQA 352



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 72/209 (34%), Gaps = 29/209 (13%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FP 435
           +   ++ +++  ++  P+G+               +  I+     LAA P+ +F      
Sbjct: 212 LTGTMLTMLVTLVLSFPLGVAAALYLEEFAPKNKWTDMIEVNINNLAAVPSIIFGLLGLA 271

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++++        P +   +L +  T   I+    A   A P   +E A+    +  +   
Sbjct: 272 VIINLFGLPRSAPLVGGIVLTLM-TLPTIIIASRASIKAVPPSIREAATGLGASKIQTTF 330

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-------- 547
             +LP   P  +TG I     A   +    +       +      A I +++        
Sbjct: 331 SHVLPMAMPGILTGTIIGMAQALGETAPLLMIGMVAFIVDVP---ASITDASTVMPVQIF 387

Query: 548 ------EKGSFPEVVLGVLIMCCFVLALN 570
                 E+G   +    +L++  F+  +N
Sbjct: 388 LWADSPERGFLAKTSAAILVLLGFLFLMN 416


>gi|110642337|ref|YP_670067.1| ABC transporter permease [Escherichia coli 536]
 gi|191170164|ref|ZP_03031718.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli F11]
 gi|300981498|ref|ZP_07175579.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|110343929|gb|ABG70166.1| hypothetical ABC transporter permease protein YehW [Escherichia
           coli 536]
 gi|190909680|gb|EDV69265.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli F11]
 gi|300307571|gb|EFJ62091.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|324013921|gb|EGB83140.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  + +  L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATFAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L    AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATFAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240


>gi|260430158|ref|ZP_05784133.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260419081|gb|EEX12336.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 276

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 80/225 (35%), Gaps = 8/225 (3%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P         ++     P     + +   S+ +++LL     A   +K R       
Sbjct: 49  WESPAAWTLDNIRSIARSDFPAALLNSFITAGSSTLLALLVGVPGAFALSKRRASNKFFA 108

Query: 102 P-ILDIMQSIPILGF-LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
             +L +++  P +GF +   +VY          G   A         VW+M  S  Q   
Sbjct: 109 SWLLLLLRMAPPVGFVIPLFLVYVRAGLIDTYAGLIFAYTSLTLPFVVWSMWTSFNQ--- 165

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP +L E       S  +  W + +P + PGLV   ++S    W     S +I   DT 
Sbjct: 166 -IPDELVEAGLMDGASLGRVLWRIVIPAARPGLVAAGVLSFLLAWNDFFFSLIITRSDTT 224

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
                + ++++ A    D  AI  A + +   I     L  + ++
Sbjct: 225 TAPVAVMNFVSYA--SVDWGAIAVASIALTLPIVPIIVLANKYIV 267



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 64/189 (33%), Gaps = 4/189 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI-QPFAQLLAAFPANVF-FPLVVSCVSY 443
           +        ++A ++ +P    +  R   +         LL   P   F  PL +  V  
Sbjct: 75  SFITAGSSTLLALLVGVPGAFALSKRRASNKFFASWLLLLLRMAPPVGFVIPLFLVYVRA 134

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             ++    L       T  ++++++    +  P++  E       +  R    I++P   
Sbjct: 135 GLIDTYAGLIFAYTSLTLPFVVWSMWTSFNQIPDELVEAGLMDGASLGRVLWRIVIPAAR 194

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V   + +   AWN    S + +          +  +++ ++    +  + +  + + 
Sbjct: 195 PGLVAAGVLSFLLAWNDFFFSLIITRSDTTTAPVAVMNFVSYASV--DWGAIAVASIALT 252

Query: 564 CFVLALNRF 572
             ++ +   
Sbjct: 253 LPIVPIIVL 261


>gi|222087199|ref|YP_002545734.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221724647|gb|ACM27803.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 288

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 72/205 (35%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFT 119
             Y   + +  +++  I+L+         A+ R  G   V + L + +S+P +   L   
Sbjct: 79  WDYFRNSLVISITSTAIALVIGMSGGYAFARFRFTGKSTVFLGLMLTRSVPGVALSLPLF 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +VY          G  L  +       +W +          +P+DL E ++    + WQ 
Sbjct: 139 MVYARLGIIDTHFGLILTYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQA 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +        LP +G     A    D  
Sbjct: 195 FWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDWR 253

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 254 GMCALAVVMIVPALALTFIIQKHLV 278



 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 19/202 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSY 443
           ++   +    IA +I +  G                  +L  + P      PL +     
Sbjct: 85  SLVISITSTAIALVIGMSGGYAFARFRFTGKSTVFLGLMLTRSVPGVALSLPLFMVYARL 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGA-------SAFPNDFKEVASSFHITGWRWWRY 496
             ++ +  L L        Y+  NV              P D  E A     T W+ +  
Sbjct: 145 GIIDTHFGLILT-------YVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQ 197

Query: 497 IILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +  P   P   +  I A    WN  ++ S++    +      GL  Y AE T    +  +
Sbjct: 198 VEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGM 255

Query: 556 VLGVLIMCCFVLALNRFLWHPL 577
               ++M    LAL   +   L
Sbjct: 256 CALAVVMIVPALALTFIIQKHL 277


>gi|157414897|ref|YP_001482153.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385861|gb|ABV52176.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747535|gb|ADN90805.1| Phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni M1]
          Length = 362

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++  
Sbjct: 265 LPLAMPMILTGSILTLAQA 283



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I     A
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAQA 283


>gi|158320153|ref|YP_001512660.1| phosphate ABC transporter, inner membrane subunit PstA
           [Alkaliphilus oremlandii OhILAs]
 gi|158140352|gb|ABW18664.1| phosphate ABC transporter, inner membrane subunit PstA
           [Alkaliphilus oremlandii OhILAs]
          Length = 299

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 14/213 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LL   +  GI+ + L   Q      + ++   IT      PQ A   +  + S   I L
Sbjct: 30  GLLLLSIGFGIVALFLLIFQVLRTGLEWINWDFITSMPSRFPQKAGIFSALVGSIWTIGL 89

Query: 81  --LFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             LF+       A        K      VL   +  +  +P + +    +  F+  +  +
Sbjct: 90  TALFSLPIGVGTAIYLEEYADKRTWHNKVLQLNISNLAGVPSIVYGILGLTVFVRFFNFE 149

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                 A    +    V  +  S  +++ ++P  L E S +  ++ WQ    + +P+++P
Sbjct: 150 RSILSGALTLTLLILPV--IIVSAQEAIKSVPNSLREGSLALGVTKWQTVTGVVLPYALP 207

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           G++   ++++S       A+ +I+VG       
Sbjct: 208 GILTGSILAISRA--MGEAAPLIMVGAAGYVAF 238



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 74/200 (37%), Gaps = 7/200 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIAS 398
           + + +   +  +   +  G+ W +  +I +  + +     +      +++ + +  + + 
Sbjct: 36  IGFGIVALFLLIFQVLRTGLEWINWDFITSMPSRFPQKAGIFSALVGSIWTIGLTALFSL 95

Query: 399 IIWIPVGIWI----GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS- 453
            I +   I++      R   +  +Q     LA  P+ V+  L ++    +       LS 
Sbjct: 96  PIGVGTAIYLEEYADKRTWHNKVLQLNISNLAGVPSIVYGILGLTVFVRFFNFERSILSG 155

Query: 454 -LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L +       I+ +      + PN  +E + +  +T W+    ++LP   P  +TG+I 
Sbjct: 156 ALTLTLLILPVIIVSAQEAIKSVPNSLREGSLALGVTKWQTVTGVVLPYALPGILTGSIL 215

Query: 513 ACGGAWNASIVSEVASWGHI 532
           A   A   +    +      
Sbjct: 216 AISRAMGEAAPLIMVGAAGY 235


>gi|91211414|ref|YP_541400.1| putative transport system permease [Escherichia coli UTI89]
 gi|117624331|ref|YP_853244.1| transporter subunit membrane protein [Escherichia coli APEC O1]
 gi|218559047|ref|YP_002391960.1| transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|237704589|ref|ZP_04535070.1| transporter subunit membrane protein [Escherichia sp. 3_2_53FAA]
 gi|91072988|gb|ABE07869.1| putative transport system permease protein [Escherichia coli UTI89]
 gi|115513455|gb|ABJ01530.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli APEC O1]
 gi|218365816|emb|CAR03556.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|226900955|gb|EEH87214.1| transporter subunit membrane protein [Escherichia sp. 3_2_53FAA]
 gi|294493965|gb|ADE92721.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli IHE3034]
 gi|307626330|gb|ADN70634.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli UM146]
 gi|315285801|gb|EFU45241.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|323951923|gb|EGB47797.1| inner membrane transport system [Escherichia coli H252]
 gi|323956162|gb|EGB51914.1| inner membrane transport system [Escherichia coli H263]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       +  +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAGFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAGFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|108805819|ref|YP_645756.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
 gi|108767062|gb|ABG05944.1| binding-protein-dependent transport systems inner membrane
           component [Rubrobacter xylanophilus DSM 9941]
          Length = 256

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 74/241 (30%), Gaps = 13/241 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L + W  +        +       V    +++    +    +T+    +  +   I+  
Sbjct: 16  ILLVIWELIARANTQPGSLWPSPVTVAEVLWEERETFVSNAAVTLTEATLGFVGGVILAA 75

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
              +   F   +   +   + +L   P     PL+V  +            ++ +  + +
Sbjct: 76  LFSLLSMFSRPLGDNLYRLSLVLYGLPLIAVAPLLVVWIGPG----LWTKVIIALLASFF 131

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +L N             E+  S   +  +    + LP   P  +     A  GA   ++
Sbjct: 132 PVLVNTTQAIRHTDPKAIEMMDSLGASRLQTLWRVRLPYALPALIASFKVAGPGAIIGAM 191

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI---MCCFVLALNRFLWHPLYL 579
           ++E            GLG  +  S      P +   +++   +   V     ++   L+ 
Sbjct: 192 LAEWVGAEK------GLGLLVLFSMFSYLIPLLWATLIVSSALSLTVYYTFEWVGRRLFP 245

Query: 580 Y 580
           +
Sbjct: 246 W 246



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 100/256 (39%), Gaps = 21/256 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV--PRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           I  ++ +++++ I  ++     +     P  +     +  +  +    A+ T        
Sbjct: 8   IISVIIYLILLVIWELIARANTQPGSLWPSPVTVAEVLWEERETFVSNAAVTLTEATLGF 67

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V  ++   +++ L+  SR LG  L  +  ++  +P++      VV+       KVI A L
Sbjct: 68  VGGVILAALFSLLSMFSRPLGDNLYRLSLVLYGLPLIAVAPLLVVWIGPGLWTKVIIALL 127

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+ F +          +  Q++ +      E+  S   S  Q  W + +P+++P L+ + 
Sbjct: 128 ASFFPVLV--------NTTQAIRHTDPKAIEMMDSLGASRLQTLWRVRLPYALPALIASF 179

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            ++  G     + +E +          G+G  +  ++    L+ +L+A L +   + L  
Sbjct: 180 KVAGPGAIIGAMLAEWVG------AEKGLGLLVLFSM-FSYLIPLLWATLIVSSALSLTV 232

Query: 257 QLLF----RPMIVWSN 268
              F    R +  W  
Sbjct: 233 YYTFEWVGRRLFPWHP 248


>gi|329890387|ref|ZP_08268730.1| phosphate ABC transporter, permease protein PstA [Brevundimonas
           diminuta ATCC 11568]
 gi|328845688|gb|EGF95252.1| phosphate ABC transporter, permease protein PstA [Brevundimonas
           diminuta ATCC 11568]
          Length = 431

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 79/226 (34%), Gaps = 18/226 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPIL 113
           ++  L      + L ++   +I++      A    +      +   I   ++ + ++P +
Sbjct: 205 ELAGLLGAVVGSALMLMVTALIAIPVGVGAAVWLEEYSPRNRITAIIEVNINNLAAVPSI 264

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N +      + L     +    +  +  +   SL  +P  + E + +  
Sbjct: 265 VYGLLGLALFIN-FMHLPRASPLVGGLVLALMALPTIIIATRSSLKAVPPSIREAALAMG 323

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW-----FFVVASEMIVVGDTVIPLPGIGS- 227
            S  Q  +   +P +MPG++   ++SM+          ++     V G        +G+ 
Sbjct: 324 ASRTQTVFGHVLPLAMPGVMTGAIISMAHALGETAPLLLIGMISFVPGVPHAIDEPVGAL 383

Query: 228 ----YIALAIKEQ----DLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
               YI     E+       A +  +L  + V+     LL R    
Sbjct: 384 PSLIYIWENASERAFHERTAAAILVLLAFMIVMNAAAVLLRRRFER 429



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 21/201 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++++ ++I IPVG+           R  I++ I+     LAA P+ V+  L ++    
Sbjct: 217 ALMLMVTALIAIPVGVGAAVWLEEYSPRNRITAIIEVNINNLAAVPSIVYGLLGLALFIN 276

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   L++       I+    +   A P   +E A +   +  +     +LP
Sbjct: 277 FMHLPRASPLVGGLVLALMALPTIIIATRSSLKAVPPSIREAALAMGASRTQTVFGHVLP 336

Query: 501 GIFPYYVTGAITACGGAWN-----ASIVSEVASWGHIHLRTTGLGA-----YIA-ESTEK 549
              P  +TGAI +   A         I       G  H     +GA     YI   ++E+
Sbjct: 337 LAMPGVMTGAIISMAHALGETAPLLLIGMISFVPGVPHAIDEPVGALPSLIYIWENASER 396

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
                    +L++  F++ +N
Sbjct: 397 AFHERTAAAILVLLAFMIVMN 417


>gi|307354774|ref|YP_003895825.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanoplanus petrolearius DSM 11571]
 gi|307158007|gb|ADN37387.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanoplanus petrolearius DSM 11571]
          Length = 314

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 78/228 (34%), Gaps = 39/228 (17%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF--------- 118
           T + M  A+ +S+      A  +   R L  VL P ++++  IP + +  F         
Sbjct: 79  TAVTMAIAVPLSIFTAIFLAEWS--PRWLTGVLRPPIEMLVGIPSVVYGIFGFFVLENIF 136

Query: 119 -------------TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
                         +  F ++ P       LA+              S  ++L  +PRD 
Sbjct: 137 QDFVDPFIDSTLGFIWIFKDVNPNSGTSILLASTVLSIMILPTVTALS-QEALETVPRDY 195

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP---- 221
              S +   + W+    + +P +MPG++   ++ +       +A  M++      P    
Sbjct: 196 RHASLALGATKWETIKKIIIPAAMPGIITAFILGLMRAIGETMAVVMLMGNSLHFPTSIL 255

Query: 222 ----------LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                     L  IG YI+    +  L AI   +  M  +     + +
Sbjct: 256 DTGYAMTSKILNDIGYYISFDEPKSALFAIGVVIFLMEFIFVALARFV 303



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 81/235 (34%), Gaps = 45/235 (19%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLV 437
            + +   +VL  +   I +P+ I+            ++  ++P  ++L   P+ V+    
Sbjct: 69  LLLIAGTIVLTAVTMAIAVPLSIFTAIFLAEWSPRWLTGVLRPPIEMLVGIPSVVYGIFG 128

Query: 438 VSCV--------------------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA--- 474
              +                     +  +NPN   S+L+       ++   +   S    
Sbjct: 129 FFVLENIFQDFVDPFIDSTLGFIWIFKDVNPNSGTSILLASTVLSIMILPTVTALSQEAL 188

Query: 475 --FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P D++  + +   T W   + II+P   P  +T  I     A   ++   +     +
Sbjct: 189 ETVPRDYRHASLALGATKWETIKKIIIPAAMPGIITAFILGLMRAIGETMAVVMLMGNSL 248

Query: 533 HLRTT--------------GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           H  T+               +G YI+    K +   + + + +M    +AL RF+
Sbjct: 249 HFPTSILDTGYAMTSKILNDIGYYISFDEPKSALFAIGVVIFLMEFIFVALARFV 303


>gi|302349192|ref|YP_003816830.1| Putative sulfur reductase membrane-bound subunit, membrane anchor
           PsrC-like protein [Acidilobus saccharovorans 345-15]
 gi|302329604|gb|ADL19799.1| Putative sulfur reductase membrane-bound subunit, membrane anchor
           PsrC-like protein [Acidilobus saccharovorans 345-15]
          Length = 246

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 82/261 (31%), Gaps = 17/261 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
             +RR    +  +   + V  + + L  G+     P     I  +           + T 
Sbjct: 1   MTARRAAGYLLGVALVIAVWQLSSELSSGLIPGPAPA----IRYLAAHPAEAAWSTAVTL 56

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +  +    ++         +          +  + +I+ S+  + +    ++        
Sbjct: 57  IDAIGGYAVASAMAVAGVAVYELGDLGESTVETVREILHSVTPVAWSLALLILLG----- 111

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
               + L  I     S    +  S+ + L        +++ +  L G ++  Y+ +P S+
Sbjct: 112 --FSSRLVPILVSGLSAFPPLETSLIEGLNASRARFGDLAAALGLRGLRRLAYIDLPASV 169

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P        ++         +E            GIG  + L  +     A     L ++
Sbjct: 170 PYFASGSRSALGVALIVSPVAEAFGTAG------GIGYGLYLFFELHQYAAFEAWSLLLV 223

Query: 250 GVIFLYDQLLFRPMIVWSNKF 270
            V+ + D    RP+  W+ K+
Sbjct: 224 LVMVIIDLGALRPIERWAMKW 244



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVV 391
           + + +   Y+L +     V  ++  ++   I        Y         W   +T+   +
Sbjct: 1   MTARRAAGYLLGVALVIAVWQLSSELSSGLIPGPAPAIRYLAAHPAEAAWSTAVTLIDAI 60

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
               +AS + +             S ++   ++L +     +    ++ +     +  L 
Sbjct: 61  GGYAVASAMAVAGVAVYELGDLGESTVETVREILHSVTPVAW---SLALLILLGFSSRLV 117

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L+        +  ++I G +A    F ++A++  + G R   YI LP   PY+ +G+ 
Sbjct: 118 PILVSGLSAFPPLETSLIEGLNASRARFGDLAAALGLRGLRRLAYIDLPASVPYFASGSR 177

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
           +A G A   S V+E            G+G  +    E   +       L++   ++ ++ 
Sbjct: 178 SALGVALIVSPVAEAFG------TAGGIGYGLYLFFELHQYAAFEAWSLLLVLVMVIIDL 231

Query: 572 FLWHPLYLYG 581
               P+  + 
Sbjct: 232 GALRPIERWA 241


>gi|331647779|ref|ZP_08348871.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli M605]
 gi|281179220|dbj|BAI55550.1| putative glycine/betaine/choline ABC transporter permease component
           [Escherichia coli SE15]
 gi|330911959|gb|EGH40469.1| osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli AA86]
 gi|331043503|gb|EGI15641.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli M605]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|227824869|ref|ZP_03989701.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905368|gb|EEH91286.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 308

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 12/182 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF----RPHISSKIQPFAQ 423
               T      V     I+   V+ L+ +   + + +   I       P     +QPF +
Sbjct: 67  APSDTASGGGQVGAAMFISGSLVICLLALLFALPVSLAAAIYMTEIASPSSRRHVQPFIE 126

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           L    P+ ++         P +    +       L  SL++       I         A 
Sbjct: 127 LFTGIPSVIYGWIGLTVLIPFLRKFFTMPFGFSVLSASLVLATMIFPVITMMASDAMMAV 186

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P   ++ A     T W   R ++LP       TG +     A   ++   +         
Sbjct: 187 PKSLRDAAYGLGATRWETIRTVVLPSARTGIFTGIVLGLARALGEALAVAMVVGQMKVFP 246

Query: 536 TT 537
           T+
Sbjct: 247 TS 248



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
           L   +++LLF    +  AA       S      + P +++   IP + +    LT  + +
Sbjct: 88  LVICLLALLFALPVSLAAAIYMTEIASPSSRRHVQPFIELFTGIPSVIYGWIGLTVLIPF 147

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +      + L+A   + T     +T     ++  +P+ L + +     + W+    
Sbjct: 148 LRKFFTMPFGFSVLSASLVLATMIFPVITMMASDAMMAVPKSLRDAAYGLGATRWETIRT 207

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
           + +P +  G+   +++ ++      +A  M+V 
Sbjct: 208 VVLPSARTGIFTGIVLGLARALGEALAVAMVVG 240


>gi|295836859|ref|ZP_06823792.1| glycine betaine/carnitine/choline transport system permease
           [Streptomyces sp. SPB74]
 gi|197699532|gb|EDY46465.1| glycine betaine/carnitine/choline transport system permease
           [Streptomyces sp. SPB74]
          Length = 282

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPI 112
           +L   ++     +     + +    L+       L  + R  +   V V   +I Q+ P 
Sbjct: 75  SLGGGNIWLRVRQHIQLTVISTFFVLIIAIPLGILLTRRRLRKAAPVAVAFANIGQATPA 134

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           LG L   V++            E  A+  I    +  +  +    L      L E +R  
Sbjct: 135 LGLLALLVIWLGTG--------EFPALVGIIVYAILPVLSNTIAGLRANDPTLLEAARGI 186

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +S       + +P ++P ++  +  ++
Sbjct: 187 GMSPLMVLGKVELPLAVPLILSGVRTAL 214



 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 7/174 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSK--IQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           V+      II IP+GI +  R    +      FA +  A PA     L+V  +       
Sbjct: 93  VISTFFVLIIAIPLGILLTRRRLRKAAPVAVAFANIGQATPALGLLALLVIWLGTGEFPA 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + + +  I      +L N IAG  A      E A    ++       + LP   P  ++
Sbjct: 153 LVGIIVYAIL----PVLSNTIAGLRANDPTLLEAARGIGMSPLMVLGKVELPLAVPLILS 208

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           G  TA       A++ +     G   + T G+          GS   +VL +L+
Sbjct: 209 GVRTALVLNVGTATLATFGGGGGLGDIITAGITNQRMSVLVIGSVLTIVLALLV 262


>gi|111021835|ref|YP_704807.1| ABC phosphate transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110821365|gb|ABG96649.1| ABC phosphate transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 302

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 75/187 (40%), Gaps = 9/187 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR---DIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +    LV  ++  ++ GI   T        +  +  +     +      T L+ +   V+
Sbjct: 38  VALVPLVWVLVTAVIKGIPALTSATWFTHSLSGLTSSAAGGGIYHALIGTILQGIVCAVL 97

Query: 79  SLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           S+      A      A +  RL  +   ++DI+  +P +    F    ++  +     G 
Sbjct: 98  SIPLGLFVAIYLVEYADRKSRLAKLTTFMVDILSGVPSIVAALFIYALWIATFGFPKSGF 157

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +A    +    V  +  S  + L  +P+DL E S +  +  W+    + +P ++PG++ 
Sbjct: 158 AVALALVLLMVPV--VVRSTEEMLRIVPQDLREASYALGVPKWKTIAKIVLPTALPGIIT 215

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 216 GVMLALA 222



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           +GV R         L +   +  ++ + W  V   +    A  S  +  +  +       
Sbjct: 17  VGVRRRIIDLTATVLVTLAVLVALVPLVWVLVTAVIKGIPALTSATWFTHSLSGLTSSAA 76

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPAN 431
                  +   ++  I+ +++ IP+G+++             ++        +L+  P+ 
Sbjct: 77  GGGIYHALIGTILQGIVCAVLSIPLGLFVAIYLVEYADRKSRLAKLTTFMVDILSGVPSI 136

Query: 432 --VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
               F   +   ++        ++L ++      ++ +        P D +E + +  + 
Sbjct: 137 VAALFIYALWIATFGFPKSGFAVALALVLLMVPVVVRSTEEMLRIVPQDLREASYALGVP 196

Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514
            W+    I+LP   P  +TG + A 
Sbjct: 197 KWKTIAKIVLPTALPGIITGVMLAL 221


>gi|307327042|ref|ZP_07606232.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306887340|gb|EFN18336.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 245

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 2/156 (1%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  ++  ++     +     V       +F     + IA  + +P+ + +G      +  
Sbjct: 3   VVAKAWTWLATGSHWAGPDGVWHRLGQHLFLTFACLAIACAVALPIAVALGHIGKGGALA 62

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              +    A P       V+  +S    +      + ++      +L N   G      +
Sbjct: 63  VNISNAGRAVPTFAVL--VLLLLSPLGTHGEWPTIIALVLFAIPPLLTNAYVGVHEADRE 120

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             E A    +TG +  R + LP  FP  +TG  TA 
Sbjct: 121 VVEAARGMGMTGGQLIRRVELPLAFPLIMTGVRTAA 156



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 6/142 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +     +      + + I+       A       + G + V I +  +++P      
Sbjct: 20  PDGVWHRLGQHLFLTFACLAIACAVALPIAVALGHIGKGGALAVNISNAGRAVPTFA--- 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              V  + L        E   I A+    +  +  + Y  +    R++ E +R   ++G 
Sbjct: 77  ---VLVLLLLSPLGTHGEWPTIIALVLFAIPPLLTNAYVGVHEADREVVEAARGMGMTGG 133

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q    + +P + P ++  +  +
Sbjct: 134 QLIRRVELPLAFPLIMTGVRTA 155


>gi|284044215|ref|YP_003394555.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283948436|gb|ADB51180.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 258

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 21/254 (8%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             +     H       P D+ +   I  D  +L + A+ T        +  LL   V A 
Sbjct: 22  WALALANDHPGTLWPAPPDVAEQ--IWTDRAALAENAAATLHEAALGFLFGLLLAVVIAL 79

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +A + R LG  L  I   + S+P++      V++F      KV+ A LA+ F        
Sbjct: 80  VADRFRTLGEGLQQIALGVYSLPLIALAPVLVIWFGTGITTKVVIAALASFF-------- 131

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  ++ Q+L        E+      SGWQ+F  L +P+++P L     ++        +
Sbjct: 132 PILINLSQALRQTDPRTLELMEIAGASGWQRFTRLKLPYALPPLFAAFTVAAPAAIVGAM 191

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF----RPMI 264
            +E +          G+G  I  ++   D+  +L+A L +   + L    LF    R + 
Sbjct: 192 LAEWVG------AEKGLGLMILFSMTSYDVP-VLWASLIVASALSLLSYGLFSYSGRRLF 244

Query: 265 VWSNKFRLERTTGI 278
            W       R    
Sbjct: 245 GWHPSVHPVRAESR 258



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 69/255 (27%), Gaps = 13/255 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
                         +L   W+ +                V    + D   +      T+ 
Sbjct: 2   SRASSRLVAAGAYALLLAGWWALALANDHPGTLWPAPPDVAEQIWTDRAALAENAAATLH 61

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
              +  +   ++ + + +       +   +Q  A  + + P     P++V          
Sbjct: 62  EAALGFLFGLLLAVVIALVADRFRTLGEGLQQIALGVYSLPLIALAPVLVIWFGTGITTK 121

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                ++    + + IL N+            E+      +GW+ +  + LP   P    
Sbjct: 122 ----VVIAALASFFPILINLSQALRQTDPRTLELMEIAGASGWQRFTRLKLPYALPPLFA 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               A   A   ++++E            GLG  I  S      P +   +++     L 
Sbjct: 178 AFTVAAPAAIVGAMLAEWVGAEK------GLGLMILFSMTSYDVPVLWASLIVASALSLL 231

Query: 569 LNRFL---WHPLYLY 580
                      L+ +
Sbjct: 232 SYGLFSYSGRRLFGW 246


>gi|300917033|ref|ZP_07133728.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300415708|gb|EFJ99018.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PILQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPILQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|302392801|ref|YP_003828621.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
 gi|302204878|gb|ADL13556.1| binding-protein-dependent transport systems inner membrane
           component [Acetohalobium arabaticum DSM 5501]
          Length = 224

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 64/152 (42%), Gaps = 10/152 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQ 108
           D   L Q    T   +L +M I+ LF                 +++++  VL  I+++ +
Sbjct: 11  DGALLWQGLYETIYMVLVSMGIATLFGIPLGVAVVVTEPDRVLENKKVNFVLGAIINVAR 70

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           SIP    L   ++    L  G  IG   AAI  +  + +  +   +  SL  +   + E 
Sbjct: 71  SIP-FIILMVAIIPVTRLLVGTSIGTT-AAIVPLAVAAIPFIGRVVENSLKEVDPGVIEA 128

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           + +   + W+    + +P ++P L+  + +++
Sbjct: 129 AEAMGATPWEIIIKVLIPEALPSLILGLTLTI 160



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 13/148 (8%)

Query: 379 VIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFP 429
           ++W G   T++ V+V + IA++  IP+G+ +             ++  +     +  + P
Sbjct: 14  LLWQGLYETIYMVLVSMGIATLFGIPLGVAVVVTEPDRVLENKKVNFVLGAIINVARSIP 73

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSF 486
             +   + +  V+   +  ++  +  ++        +I   V            E A + 
Sbjct: 74  FIILM-VAIIPVTRLLVGTSIGTTAAIVPLAVAAIPFIGRVVENSLKEVDPGVIEAAEAM 132

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
             T W     +++P   P  + G     
Sbjct: 133 GATPWEIIIKVLIPEALPSLILGLTLTI 160


>gi|262274680|ref|ZP_06052491.1| methionine ABC transporter permease protein [Grimontia hollisae CIP
           101886]
 gi|262221243|gb|EEY72557.1| methionine ABC transporter permease protein [Grimontia hollisae CIP
           101886]
          Length = 230

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQS 109
           V  L +   +T   +L +  I  LF      L   ++         L   +  +++I +S
Sbjct: 19  VGLLAEALGQTLTMVLVSGAIGFLFGIPLGVLLHLTKPRGLLENTVLNKSIGTLVNIGRS 78

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +
Sbjct: 79  IP-FIILLVAIIPFTRFVVGSSIGTG-AAIVPLTVGAIPFIARLVEGALLEVPSGLVEAA 136

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++   +  Q    + +P ++PG++    +++
Sbjct: 137 QAMGATPLQIIHKVLLPEALPGILNGATITL 167



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V+V   I  +  IP+G+ +             ++  I     +  + P  +   + 
Sbjct: 29  TLTMVLVSGAIGFLFGIPLGVLLHLTKPRGLLENTVLNKSIGTLVNIGRSIPFIILL-VA 87

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++     ++    G   +I   V       P+   E A +   T  +  
Sbjct: 88  IIPFTRFVVGSSIGTGAAIVPLTVGAIPFIARLVEGALLEVPSGLVEAAQAMGATPLQII 147

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  + GA        + S ++     G +          I    ++     
Sbjct: 148 HKVLLPEALPGILNGATITLVTLVSYSAMAGAVGGGGLGDVG------IRYGYQRFDGTV 201

Query: 555 VVLGVLIMCCFVLAL 569
           +++ V+++   V  +
Sbjct: 202 MLITVVMLVIMVQLI 216


>gi|297203146|ref|ZP_06920543.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197717472|gb|EDY61506.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 222

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 11/172 (6%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+  G      + +   A    A P      L+   + +  +N  + L +L       
Sbjct: 47  PVGLVTGHVGRGGNALAFIAVAGRAVPTFGLLVLMTLSLGFGLINVMIPLVVL----AVP 102

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            IL        +      + A    +        + LP   P  + G  +A     + + 
Sbjct: 103 PILVTSYEAMRSVDPAPVDAARGMGMHEVEVLFRVELPVALPLILGGLRSAAIQIVSTAT 162

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           ++   S G       GLG YI +   + ++ +VV G  ++    L      W
Sbjct: 163 IAAYVSLG-------GLGRYIVDGLYQRNYEKVVGGATLVALMALVTLAVFW 207



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/176 (9%), Positives = 59/176 (33%), Gaps = 15/176 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
               +     R G  L  I    +++P  G L    +                 +  +  
Sbjct: 47  PVGLVTGHVGRGGNALAFIAVAGRAVPTFGLLVLMTLSLGFGLIN--------VMIPLVV 98

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V  +  + Y+++ ++     + +R   +   +  + + +P ++P ++  +  +     
Sbjct: 99  LAVPPILVTSYEAMRSVDPAPVDAARGMGMHEVEVLFRVELPVALPLILGGLRSAAIQIV 158

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                +  + +G       G+G YI   + +++   ++     +  +  +   + +
Sbjct: 159 STATIAAYVSLG-------GLGRYIVDGLYQRNYEKVVGGATLVALMALVTLAVFW 207


>gi|291616806|ref|YP_003519548.1| YehW [Pantoea ananatis LMG 20103]
 gi|291151836|gb|ADD76420.1| YehW [Pantoea ananatis LMG 20103]
          Length = 243

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 87/245 (35%), Gaps = 21/245 (8%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L ++++  +  +               D+        S  Q        +++A ++++
Sbjct: 6   DPLLWLVLFYLSLLAAMPYSGPVFAAWFPDLARPLYQQDSFWQLTLAHLFLVVTASLMAV 65

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +       L   +R  G    P+L+ +    Q+IP +  L   V                
Sbjct: 66  VIGVGSGVLV--TRPAGRAFRPLLETIAAAGQTIPPVAVLAIAVPVMG--------FGAW 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +       L ++P    E++    +SGWQ+ W + +  + P ++  +
Sbjct: 116 PAVVALLLYGLLPILQGTLAGLDSVPASSREIAVGVGMSGWQRLWQVELALAAPVIIAGI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             S       V+ +       + +    +GS I + +   +   ++   L +  +  + D
Sbjct: 176 RNS-------VIINIGTAAIASTVGAKSLGSPIIIGLSGFNTAYVIQGALLVGLLAIVSD 228

Query: 257 QLLFR 261
           +L  R
Sbjct: 229 RLFER 233



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L +F+  ++  +       +  +               L    +F VV   ++A +I +
Sbjct: 10  WLVLFYLSLLAAMPYSGPVFAAWFPDLARPLYQQDSFWQLTLAHLFLVVTASLMAVVIGV 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             G+ +          +P  + +AA     P      + V  + +      + L L  + 
Sbjct: 70  GSGVLV--TRPAGRAFRPLLETIAAAGQTIPPVAVLAIAVPVMGFGAWPAVVALLLYGLL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                     +AG  + P   +E+A    ++GW+    + L    P  + G         
Sbjct: 128 PIL----QGTLAGLDSVPASSREIAVGVGMSGWQRLWQVELALAAPVIIAGIR------- 176

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           N+ I++   +     +    LG+ I       +   V+ G L++    +  +R  
Sbjct: 177 NSVIINIGTAAIASTVGAKSLGSPIIIGLSGFNTAYVIQGALLVGLLAIVSDRLF 231


>gi|289551740|ref|YP_003472644.1| Methionine ABC transporter permease protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|289181271|gb|ADC88516.1| Methionine ABC transporter permease protein [Staphylococcus
           lugdunensis HKU09-01]
          Length = 219

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           ++D   L Q    T   +  +++I  L       L   +RR        +  +L P+++I
Sbjct: 5   SIDSSQLLQALYETLYMVTISLIIGALIGIPLGVLLVITRRHGIWPNTVIHQLLNPMINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + +II ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSSQLLQALYETLYMVTISLIIGALIGIPLGVLLVITRRHGIWPNTVIHQLLNPMINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|224476519|ref|YP_002634125.1| putative phosphate ABC transporter permease [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421126|emb|CAL27940.1| putative phosphate ABC transporter permease protein [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 309

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 70/188 (37%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  +++  ++   L        P    +       +  +      T   M++ + IS++
Sbjct: 44  LIGLLVLATLLGDTLIKGIPYLKPSFFTNFSSSMPQMAGIKGALVGTLWLMITIIPISII 103

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAE 135
                A      A        +   +  +  +P + F    +  F   M +    +  + 
Sbjct: 104 LGVGTAIYLEEYAHDNAFTSFIKISISNLAGVPSVVFGLLGLTIFVRGMGIESLSLGKSV 163

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LAA   +    +  +  S  +++  +P+ + E S     + WQ  + + +P ++PG++  
Sbjct: 164 LAAALTMSLLILPVIIVSSQEAIRAVPKSVREASYGLGGNKWQTIYKIVLPAALPGIMTG 223

Query: 196 MMMSMSGG 203
            ++S+S  
Sbjct: 224 FILSLSRA 231



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 422 AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASA 474
              LA  P+ VF    L +        + +L  S+L    T   ++  VI         A
Sbjct: 129 ISNLAGVPSVVFGLLGLTIFVRGMGIESLSLGKSVLAAALTMSLLILPVIIVSSQEAIRA 188

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            P   +E +       W+    I+LP   P  +TG I +   A
Sbjct: 189 VPKSVREASYGLGGNKWQTIYKIVLPAALPGIMTGFILSLSRA 231


>gi|312127777|ref|YP_003992651.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor hydrothermalis 108]
 gi|311777796|gb|ADQ07282.1| binding-protein-dependent transport systems inner membrane
           component [Caldicellulosiruptor hydrothermalis 108]
          Length = 217

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 63/154 (40%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  +  L     +T   ++ + +I+ +                  ++  L  +L  I++
Sbjct: 1   MSETLQLLLVSTWQTIYMVVISTLIATVLGIPLGVFLMVTDKGQILQNDILNKILSTIVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +SIP    L   ++ F  L  G  IG   AAI  +  + +  M      +L  +   +
Sbjct: 61  IFRSIP-FVILLIVLMPFTRLIVGTSIGTT-AAIVPLSIAAIPFMGRITETALREVDHGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E +++   S +Q    + +P ++P +V  + ++
Sbjct: 119 IEAAQAMGASPFQIITKVLIPEALPSIVSGITIT 152



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 54/140 (38%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VV+  +IA+++ IP+G++        I     ++  +     +  + P  +   +V
Sbjct: 15  TIYMVVISTLIATVLGIPLGVFLMVTDKGQILQNDILNKILSTIVNIFRSIPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++  +  ++  +   I F             +   E A +   + ++  
Sbjct: 74  LMPFTRLIVGTSIGTTAAIVPLSIAAIPFMGRITETALREVDHGVIEAAQAMGASPFQII 133

Query: 495 RYIILPGIFPYYVTGAITAC 514
             +++P   P  V+G     
Sbjct: 134 TKVLIPEALPSIVSGITITA 153


>gi|254448603|ref|ZP_05062062.1| phosphate ABC transporter, permease protein PstA [gamma
           proteobacterium HTCC5015]
 gi|198261792|gb|EDY86078.1| phosphate ABC transporter, permease protein PstA [gamma
           proteobacterium HTCC5015]
          Length = 426

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++++L+ +F     AA          R   ++   ++ + ++P + F    +  F+N
Sbjct: 212 FFTLIVTLVLSFPVGVAAAVYLEEFAPQNRWTDLIEVNINNLAAVPSIVFGLLGLAVFLN 271

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    A L     +    +  +  S   +L  +P  + E +     S  Q  ++  +
Sbjct: 272 -FMGLPRSAPLVGGLVLTLMTLPTIIISSRAALKAVPPSIREAALGMGASRMQTIFHHVL 330

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ M+  
Sbjct: 331 PLAMPGMLTGTIIGMAQA 348



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 21/203 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
              +I+  ++  PVG+               +  I+     LAA P+ VF  L ++    
Sbjct: 212 FFTLIVTLVLSFPVGVAAAVYLEEFAPQNRWTDLIEVNINNLAAVPSIVFGLLGLAVFLN 271

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   L++   T   I+ +  A   A P   +E A     +  +   + +LP
Sbjct: 272 FMGLPRSAPLVGGLVLTLMTLPTIIISSRAALKAVPPSIREAALGMGASRMQTIFHHVLP 331

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLG----------AYIAESTEK 549
              P  +TG I     A   S    +            G+              A+  E+
Sbjct: 332 LAMPGMLTGTIIGMAQALGESAPLLMIGMVAFVAEVPQGITDPATVLPVQIFQWADLPER 391

Query: 550 GSFPEVVLGVLIMCCFVLALNRF 572
           G        ++++  F++A+N F
Sbjct: 392 GFVERTSAAIMVLLAFLIAMNAF 414


>gi|17229925|ref|NP_486473.1| ATP-binding protein of ABC transporter [Nostoc sp. PCC 7120]
 gi|17131525|dbj|BAB74132.1| ATP-binding protein of ABC transporter [Nostoc sp. PCC 7120]
          Length = 601

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 28/215 (13%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA------AKSRRLGMVLVPILD 105
           +PI L    +      +    L A  I+       A          KS   G+ + P++ 
Sbjct: 1   MPIDLSPLWI------SLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGIFVAPLI- 53

Query: 106 IMQSIPILGFLTFTVVYFMNLYPG---------KVIGAELAAIFAIFTSQVWNMTFSMYQ 156
               +P        +++F    P           ++     A  A        M  +   
Sbjct: 54  ----LPPTVVGFLLLLFFGKNGPIGKLMEPFDISIVFTWYGAAIAATIVSFPLMYKTSLG 109

Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +   I  +L  V+R+   S    FW + +P + PG+V   M+S +       A+ M+  G
Sbjct: 110 AFTQIDGNLLRVARTLGASESTIFWRISLPLAFPGIVAATMLSFARALGEFGATLMLA-G 168

Query: 217 DTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLG 250
           +       I   I  A++         +AM+ M+ 
Sbjct: 169 NIPGQTQTIPMAIYFAVEAGATDEAWFWAMMIMVI 203



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 74/225 (32%), Gaps = 23/225 (10%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           +D+    +    ++   + +    +    +           I    V  LI+  +++   
Sbjct: 3   IDLSPLWISLKTSLLATFITFFLGIAAAYWMLSYRGKGKSLIEGIFVAPLILPPTVVGFL 62

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           + ++ G    I   ++PF                   + +      +  +++      + 
Sbjct: 63  LLLFFGKNGPIGKLMEPF----------------DISIVFTWYGAAIAATIV-----SFP 101

Query: 464 ILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           +++    GA +    +   VA +   +    +  I LP  FP  V   + +   A     
Sbjct: 102 LMYKTSLGAFTQIDGNLLRVARTLGASESTIFWRISLPLAFPGIVAATMLSFARALGEFG 161

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
            + + + G+I  +T  +   I  + E G+  E     +++    L
Sbjct: 162 ATLMLA-GNIPGQTQTIPMAIYFAVEAGATDEAWFWAMMIMVISL 205


>gi|86144582|ref|ZP_01062914.1| phosphate ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218675988|ref|YP_002394807.1| ABC transporter: Transmembrane protein; phosphate uptake [Vibrio
           splendidus LGP32]
 gi|85837481|gb|EAQ55593.1| phosphate ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218324256|emb|CAV25544.1| ABC transporter: Transmembrane protein; phosphate uptake [Vibrio
           splendidus LGP32]
          Length = 309

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP         
Sbjct: 31  KERIFHGLFLTSAIIGIVSLAVIAFFIVRESIPAFQEAGLSGIVLGQNWLPPALYGVATM 90

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +  L A+V+ +    + A   A+   +RL  ++ P ++++  IP + +    L  
Sbjct: 91  IVASVVSTLGAVVVGVPIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLVI 150

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 151 IVPLIQNVFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIF 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 211 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 248



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 17/201 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I +F V   +         G ++        LY +    +     VV  + A ++ +
Sbjct: 50  LAVIAFFIVRESIPAFQEAGLSGIVLGQNWLPPALYGVATMIVAS---VVSTLGAVVVGV 106

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNP 448
           P+G+             ++  I+P  +LLA  P+ V+         PL+ +       N 
Sbjct: 107 PIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFQVPAGNT 166

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L   +++       ++        A P  +KE + +   +       +++P      +T
Sbjct: 167 ILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIFTIFKLLVPAARSGIMT 226

Query: 509 GAITACGGAWNASIVSEVASW 529
           G I   G A   ++   +   
Sbjct: 227 GVILGIGRALGETMAIIMVMG 247


>gi|166031595|ref|ZP_02234424.1| hypothetical protein DORFOR_01295 [Dorea formicigenerans ATCC
           27755]
 gi|166028572|gb|EDR47329.1| hypothetical protein DORFOR_01295 [Dorea formicigenerans ATCC
           27755]
          Length = 291

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 62/152 (40%), Gaps = 5/152 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPI 112
           L   S+      T   +  ++V S+           + AK   L   L   ++ + S+P 
Sbjct: 52  LRKGSIGNQLFNTIYLVFISLVFSVPLGVTAGIYLSMYAKKGFLTKFLRICIETLSSLPS 111

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +    F  + F+  +   +  + LA   +I    +  +T +   ++  +P D  + S   
Sbjct: 112 IVVGLFGYLVFLVFF--GLGKSLLAGALSISILAIPVITTTTEDAINGLPDDYLQASLGL 169

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             + WQ  +++ +P  +P ++  ++++   G+
Sbjct: 170 GATRWQSIYHVLLPACIPRIMTGVILAAGRGF 201



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 72/183 (39%), Gaps = 6/183 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++ +F+F ++   A  +  +         F +     +      T++ V + ++ +  + 
Sbjct: 20  LIAVFFFALLISFASYVIIKGFSGATPEMFRFLRKGSIGNQLFNTIYLVFISLVFSVPLG 79

Query: 402 IPVGIWIGFRPH---ISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        ++  ++   + L++ P+ V   F  +V  V +      L  +L +
Sbjct: 80  VTAGIYLSMYAKKGFLTKFLRICIETLSSLPSIVVGLFGYLVFLVFFGLGKSLLAGALSI 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  I        +  P+D+ + +     T W+   +++LP   P  +TG I A G 
Sbjct: 140 SILAIPVITTTTEDAINGLPDDYLQASLGLGATRWQSIYHVLLPACIPRIMTGVILAAGR 199

Query: 517 AWN 519
            + 
Sbjct: 200 GFG 202


>gi|90407666|ref|ZP_01215846.1| putative ABC-type metal ion transport system, permease component
           [Psychromonas sp. CNPT3]
 gi|90311257|gb|EAS39362.1| putative ABC-type metal ion transport system, permease component
           [Psychromonas sp. CNPT3]
          Length = 228

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +   +T   + S+ +I          L   S++        L  VL  +++I +SIP 
Sbjct: 20  LIEALGQTLNMVFSSGLIGFAIGIPLGVLLHISKKNGLLENSILNRVLGIVVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +++ 
Sbjct: 79  FIILLVAIIPFTRFIVGSSIGT-AAAIVPLTIGAIPFIARLVEGALLEVPNGLVEAAQAM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PG++   ++++
Sbjct: 138 GASPLQIIIKVLLPEALPGIINAGIITL 165



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 62/192 (32%), Gaps = 18/192 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    +I   I IP+G+ +             ++  +     +  + P  +   + 
Sbjct: 27  TLNMVFSSGLIGFAIGIPLGVLLHISKKNGLLENSILNRVLGIVVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       PN   E A +   +  +  
Sbjct: 86  IIPFTRFIVGSSIGTAAAIVPLTIGAIPFIARLVEGALLEVPNGLVEAAQAMGASPLQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  +   I         S ++     G +          I    ++     
Sbjct: 146 IKVLLPEALPGIINAGIITLVTLVGYSAMAGTVGGGGLGDVG------IRYGYQRFDGTV 199

Query: 555 VVLGVLIMCCFV 566
           + + V+++   V
Sbjct: 200 MFITVVMLVILV 211


>gi|86153473|ref|ZP_01071677.1| phosphate ABC transporter, permease protein PstA [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|85843199|gb|EAQ60410.1| phosphate ABC transporter, permease protein PstA [Campylobacter
           jejuni subsp. jejuni HB93-13]
          Length = 362

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++  
Sbjct: 265 LPLAMPMILTGSILTLAQA 283



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVIGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I     A
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAQA 283


>gi|332638460|ref|ZP_08417323.1| ABC-type phosphate transport system, permease component [Weissella
           cibaria KACC 11862]
          Length = 297

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 9/203 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLP 62
           +L P  + +I   I   +A  +++ +  +L + + +                      + 
Sbjct: 1   MLNPKQADKIASAILYAIAGFVILILAALLGYILYQGVPHLSWHFLTAPATAFTAGGGIG 60

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
                +   ++  M+IS              A K  R   ++   ++I+ S+P +    F
Sbjct: 61  IQLFNSLYLLVITMLISFPIALGAGIYLNEYANKKSRATALIRTAIEILSSLPSVVVGLF 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + F+  +  K+  + L+   ++    +  +T S+ +SL  IP    E   +  LS W+
Sbjct: 121 GFLLFVVQF--KLGFSILSGAISLTFFNLPLLTRSVEESLRTIPDLQREAGAALGLSRWE 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS 201
              ++ +P ++P +V  +++S  
Sbjct: 179 TVGHIILPAALPSIVTGVVLSAG 201



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 77/197 (39%), Gaps = 22/197 (11%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVL 393
           + Y +  F   ++  +   I +Q + ++  HF           G I      +++ +V+ 
Sbjct: 14  ILYAIAGFVILILAALLGYILYQGVPHLSWHFLTAPATAFTAGGGIGIQLFNSLYLLVIT 73

Query: 394 IIIASIIWIPVGIWIGFRP----HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           ++I+  I +  GI++          ++ I+   ++L++ P+     +VV    +      
Sbjct: 74  MLISFPIALGAGIYLNEYANKKSRATALIRTAIEILSSLPS-----VVVGLFGFLLFVVQ 128

Query: 450 LWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             L   ++ G      FN       V       P+  +E  ++  ++ W    +IILP  
Sbjct: 129 FKLGFSILSGAISLTFFNLPLLTRSVEESLRTIPDLQREAGAALGLSRWETVGHIILPAA 188

Query: 503 FPYYVTGAITACGGAWN 519
            P  VTG + + G  + 
Sbjct: 189 LPSIVTGVVLSAGRVFG 205


>gi|262406233|ref|ZP_06082782.1| putrescine transport system permease potH [Bacteroides sp. 2_1_22]
 gi|294647565|ref|ZP_06725141.1| ABC transporter, permease protein [Bacteroides ovatus SD CC 2a]
 gi|294810123|ref|ZP_06768794.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|298483866|ref|ZP_07002037.1| putrescine transport system permease protein PotH [Bacteroides sp.
           D22]
 gi|262354936|gb|EEZ04027.1| putrescine transport system permease potH [Bacteroides sp. 2_1_22]
 gi|292637082|gb|EFF55524.1| ABC transporter, permease protein [Bacteroides ovatus SD CC 2a]
 gi|294442727|gb|EFG11523.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|298269926|gb|EFI11516.1| putrescine transport system permease protein PotH [Bacteroides sp.
           D22]
          Length = 266

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  ++I +  I+++   + +    + +         ++      +    +   ++ +L  
Sbjct: 24  AIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTLVCILLG 82

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +  A + + S+      + +L I+   + IL     TV  F       V   E A IF +
Sbjct: 83  YPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGM 139

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM    
Sbjct: 140 VYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSMPGVMSGIMMVFMP 199

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 200 TISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 251



 Score = 38.8 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  +     I   +      H T  +            T    + 
Sbjct: 10  SSRKSWTLPYIIFSAIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAINTFVYSIG 69

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II +++ I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 70  IAIITTLVCILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 129

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 130 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSMPGV 189

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 190 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 245

Query: 567 LALNRF 572
            A + F
Sbjct: 246 AATSLF 251


>gi|213418607|ref|ZP_03351673.1| putative permease transmembrane component [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 205

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA------- 137
               L   S      +  +L+++Q+IP +      +     L       AE         
Sbjct: 17  TVGRLVYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMT 76

Query: 138 -AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +   +   L  +PRD+ E +R+  +S  Q+F ++ +P ++P  + ++
Sbjct: 77  PALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSL 136

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
            + M       VA+ +I  G       G G+ +   +    +  +L  ++ ++ +  + D
Sbjct: 137 RVVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDLVLLGVIPVIALAVVID 189

Query: 257 QLL 259
            L 
Sbjct: 190 ALF 192



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL----------- 452
           VG  + F       +     ++   P+   F L+++ ++                     
Sbjct: 18  VGRLVYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTP 77

Query: 453 -SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + ++      ++  V+AG +  P D  E A +  ++  + +R++ LP   P ++    
Sbjct: 78  ALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLR 137

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
                    ++ + +   G       G GA + +     +   V+LGV+ +    + ++ 
Sbjct: 138 VVMVQTVGMAVAAALIGAG-------GFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDA 190

Query: 572 FL 573
             
Sbjct: 191 LF 192


>gi|153870079|ref|ZP_01999552.1| phosphate ABC transporter, permease protein PstA [Beggiatoa sp. PS]
 gi|152073452|gb|EDN70445.1| phosphate ABC transporter, permease protein PstA [Beggiatoa sp. PS]
          Length = 418

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 59/139 (42%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              ++I+LL +F    +AA        ++R +   +   ++ + ++P + F    +  F+
Sbjct: 204 FYTLLITLLLSFPIGVMAAIYLEEFAPRNRWID-FVEVNINNLAAVPSIVFGLLGLAIFI 262

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   ++  +P  + E +     S  Q  ++  
Sbjct: 263 NFF-GVPRSAPLVGGMVLALMTLPTIIIASRSAIKAVPPSMREAALGLGASKIQVAFHHV 321

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           VP +MPG++   ++ ++  
Sbjct: 322 VPLAMPGILTGTIIGLAQA 340



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 59/161 (36%), Gaps = 6/161 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            ++  +      + + +++ ++++  I +   I++     R      ++     LAA P+
Sbjct: 191 PELAGIWGAVMGSFYTLLITLLLSFPIGVMAAIYLEEFAPRNRWIDFVEVNINNLAAVPS 250

Query: 431 NVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            VF  L ++    +   P    L   +++   T   I+    +   A P   +E A    
Sbjct: 251 IVFGLLGLAIFINFFGVPRSAPLVGGMVLALMTLPTIIIASRSAIKAVPPSMREAALGLG 310

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +  +   + ++P   P  +TG I     A   +    +  
Sbjct: 311 ASKIQVAFHHVVPLAMPGILTGTIIGLAQALGETAPLLMIG 351


>gi|150018363|ref|YP_001310617.1| glycine/betaine ABC transporter permease [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904828|gb|ABR35661.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 203

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L +        +L  +VIS++   +   LAA S+    +LV I  ++ SIP L    
Sbjct: 9   PDKLLKAFVGHIEIVLITLVISIILAALLTILAAYSKIASKLLVNIFAMIYSIPSLAL-- 66

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                F  L P   +G   A I  +  +Q + +  +    L N+   + E +    +S  
Sbjct: 67  -----FAILVPITGLGKVTAIIVLVLYNQ-YILLRNTIDGLNNVDASIVEAATGMGMSKS 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P     +   + ++       VV++  I      I   GIGS +   ++  +
Sbjct: 121 QILFQIKLPLVTKPIFAGIHLA-------VVSTIGIATIAASINAGGIGSVLLDGLRTVN 173

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              IL+  L   G+  + + +L
Sbjct: 174 TAKILWGTLMSAGLAIVVNAIL 195



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ ++I+ I+   + I   +    S  +     ++ + P+   F ++V           
Sbjct: 23  VLITLVISIILAALLTILAAYSKIASKLLVNIFAMIYSIPSLALFAILVPITGLG----K 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   ++++   Q+ +L N I G +       E A+   ++  +    I LP +      G
Sbjct: 79  VTAIIVLVLYNQYILLRNTIDGLNNVDASIVEAATGMGMSKSQILFQIKLPLVTKPIFAG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++   + G       G+G+ + +     +  +++ G L+     + +
Sbjct: 139 IHLAVVSTIGIATIAASINAG-------GIGSVLLDGLRTVNTAKILWGTLMSAGLAIVV 191

Query: 570 NRFL 573
           N  L
Sbjct: 192 NAIL 195


>gi|257093239|ref|YP_003166880.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045763|gb|ACV34951.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 284

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG--FLTFTVVYF 123
            R+ L   +  ++ L+  +  A   A+S R    L+ +L I+         FL     + 
Sbjct: 85  LRSFLVAAATTLLCLVLAYPLALAIARSARRHRDLLVLLVIL----PFASNFLIRIYAWI 140

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + L P  ++ +  A I  +    +  M   +Y +L      L E ++      W +F  +
Sbjct: 141 IVLGPADLLYSPFAVIAGMVYVHLPFMILPLYTNLEKHDPALLEAAQDLGADTWTRFRRI 200

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P S+PG+             F+    M  + + +     I   +   IKEQ L +  +
Sbjct: 201 TLPLSLPGIWAGS------ALVFIPVLGMFAIPELLGGTGDI--LVGNLIKEQFLESRDW 252

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNK 269
            +   L ++     LL   +  W+ +
Sbjct: 253 PLGATLSILLTIAVLLLAGISAWAGR 278



 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 8/188 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +        ++  ++  P+ + I         +     +L  F +N     + + +    
Sbjct: 87  SFLVAAATTLLCLVLAYPLALAIARSARRHRDLLVLLVIL-PFASNFLI-RIYAWIIVLG 144

Query: 446 LNPNLWLSLLMIFGTQW----YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               L+    +I G  +    +++  +            E A       W  +R I LP 
Sbjct: 145 PADLLYSPFAVIAGMVYVHLPFMILPLYTNLEKHDPALLEAAQDLGADTWTRFRRITLPL 204

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--KGSFPEVVLGV 559
             P    G+            + E+       L    +     ES +   G+   ++L +
Sbjct: 205 SLPGIWAGSALVFIPVLGMFAIPELLGGTGDILVGNLIKEQFLESRDWPLGATLSILLTI 264

Query: 560 LIMCCFVL 567
            ++    +
Sbjct: 265 AVLLLAGI 272


>gi|188584760|ref|YP_001916305.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349447|gb|ACB83717.1| binding-protein-dependent transport systems inner membrane
           component [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 216

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 59/163 (36%), Gaps = 15/163 (9%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
              ++   + L  +++ +  I+ +IP L  +      F               I A+   
Sbjct: 46  LGLVSTYYKSLANIILTVTQILMTIPSLAMIAIIFPLFGIG--------PTTGIVALVLY 97

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  + Y  +  +  ++ E ++   +S  +    + +P ++P ++  +  +      
Sbjct: 98  SLLPIVRNTYTGINELDANVLEAAKGMGMSERKILLKIKIPLALPVIIAGIRTA------ 151

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            VV    I    ++I   G+G +I   I       IL   + +
Sbjct: 152 -VVMVVGIGAIASLIGAGGLGDFIFRGISRDFPFMILAGAIGV 193



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 12/155 (7%)

Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
           +G+   +   +++ I    Q+L   P+     ++            + L L  +      
Sbjct: 46  LGLVSTYYKSLANIILTVTQILMTIPSLAMIAIIFPLFGIGPTTGIVALVLYSLL----P 101

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ N   G +    +  E A    ++  +    I +P   P  + G  TA         +
Sbjct: 102 IVRNTYTGINELDANVLEAAKGMGMSERKILLKIKIPLALPVIIAGIRTAVVMVVGIGAI 161

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           + +   G       GLG +I     +  FP ++L 
Sbjct: 162 ASLIGAG-------GLGDFIFRGISR-DFPFMILA 188


>gi|91772769|ref|YP_565461.1| ABC phosphate transporter, inner membrane subunit [Methanococcoides
           burtonii DSM 6242]
 gi|91711784|gb|ABE51711.1| Phosphate import ABC transporter permease protein [Methanococcoides
           burtonii DSM 6242]
          Length = 286

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 73  LSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  + +S+ F      L+A          R    +   ++ +   P + F  F +  F+ 
Sbjct: 69  LMLIGLSMAFAIPLGILSAIYLNEYSTPGRASWAIEMAINNLAGTPSVVFGLFGLALFVK 128

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +         +   A+    V  +  +  ++L  +P++  E S +  ++ WQ    + +
Sbjct: 129 YFGFGASLLSASLTLALLIVPV--IIRASKEALMTVPQEYREASLALGVTKWQTTRKVIL 186

Query: 186 PFSMPGLVWNMMMSMS 201
           P ++PG++  +++S+ 
Sbjct: 187 PAAIPGMMTGIILSVG 202



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 11/178 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGI 406
              V  + I I       +   F  Q  +  +  G I   +   ++LI ++    IP+GI
Sbjct: 25  LAFVSIIVIYITVNGYSALSLDFITQMPMKRMTQGGIYPAIMGSLMLIGLSMAFAIPLGI 84

Query: 407 WIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLSLLMIF 458
                          S  I+     LA  P+ VF    ++    Y+    +L  + L + 
Sbjct: 85  LSAIYLNEYSTPGRASWAIEMAINNLAGTPSVVFGLFGLALFVKYFGFGASLLSASLTLA 144

Query: 459 GTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                ++           P +++E + +  +T W+  R +ILP   P  +TG I + G
Sbjct: 145 LLIVPVIIRASKEALMTVPQEYREASLALGVTKWQTTRKVILPAAIPGMMTGIILSVG 202


>gi|302523794|ref|ZP_07276136.1| predicted protein [Streptomyces sp. AA4]
 gi|302432689|gb|EFL04505.1| predicted protein [Streptomyces sp. AA4]
          Length = 237

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 11/206 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            D   +P    +       A+ +S++ T   A +    RR   +    ++I ++IP  G 
Sbjct: 20  TDPAGIPFRTVQHLWFSALALALSIVLTVPLALVLGHYRRGQFLASSAVNIGRAIPSFGL 79

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +   + +F+    G         + A+    +  +  + Y  +  + +++ + +R     
Sbjct: 80  II--LFWFLASRWGANT-DFWPLLLALVALALPPLFTNTYAGVVQVEQEVVDAARGTGYR 136

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL--AI 233
            WQ    + +P S P +V    ++      F+     + +G  V    G+G YI    A+
Sbjct: 137 EWQIMLRVELPLSSPVIVAAARVA------FLQLVATVAIGAIVNDGGGLGRYIVDGFAL 190

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
            EQ    I    L ++ + ++ + L 
Sbjct: 191 GEQGHGEIFGGGLAVVVLAWVCEGLF 216



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 9/205 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++ D   + +     ++   + + ++ ++ +P+ + +G              +  A P+ 
Sbjct: 18  SWTDPAGIPFRTVQHLWFSALALALSIVLTVPLALVLGHYRRGQFLASSAVNIGRAIPSF 77

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITG 490
               L     S +  N + W  LL +       LF N  AG      +  + A       
Sbjct: 78  GLIILFWFLASRWGANTDFWPLLLALVALALPPLFTNTYAGVVQVEQEVVDAARGTGYRE 137

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+    + LP   P  V  A  A         +    + G I     GLG YI +    G
Sbjct: 138 WQIMLRVELPLSSPVIVAAARVA------FLQLVATVAIGAIVNDGGGLGRYIVDGFALG 191

Query: 551 S--FPEVVLGVLIMCCFVLALNRFL 573
                E+  G L +           
Sbjct: 192 EQGHGEIFGGGLAVVVLAWVCEGLF 216


>gi|326779054|ref|ZP_08238319.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659387|gb|EGE44233.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 215

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++     L   A +    +   MVI+ +   V   ++ +S   G + +     + +IP L
Sbjct: 7   LSTRHQQLLTDAFQHVSAVFQCMVIATVLGVVIGVVSYRSGWGGSLAITSTATILTIPSL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                       L P   +G     I       +  +  +    L  +   L + +    
Sbjct: 67  A-------AIGLLIPLVGLGVAPTVITLTLYGLL-PIVRNSIVGLRGVDPSLVDAATGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S   +   + +P + P ++  + ++ +     + A      G      PG+G+ I   I
Sbjct: 119 MSRLARLCRVELPLAWPPILTGIRVA-TQMLMGIAAIAAYASG------PGLGNEIFRGI 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                   +  +L     I +   L 
Sbjct: 172 ASLGSANAINQVLAGTLGIVILALLF 197



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA+++ + +G+         S        +   P+     L++  V        
Sbjct: 25  VFQCMVIATVLGVVIGVVSYRSGWGGSLAITSTATILTIPSLAAIGLLIPLVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A+   ++       + LP  +P  +TG
Sbjct: 85  ITLTLYGLL----PIVRNSIVGLRGVDPSLVDAATGIGMSRLARLCRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++  AS   +      +   IA      +  +V+ G L +    L  
Sbjct: 141 IRVATQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSANAINQVLAGTLGIVILALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|220925008|ref|YP_002500310.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
 gi|219949615|gb|ACL60007.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium nodulans ORS 2060]
          Length = 221

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L      T   +  A  +  LF        A S             VL  +++  +S P 
Sbjct: 9   LVVATGDTLRMVAIAAGLGTLFGLPLGVFLATSGRGELFAAPWANRVLGILVNATRSTP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   A +     +  + +   +  ++  +   L E +R+F
Sbjct: 68  FIILVVAIIPFTRLVAGTSIGTNAATVPLTVAATPF-IARLVEGAIREVDAGLVEAARAF 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PG+V  + +++
Sbjct: 127 GASPLQIVLKVLIPEALPGIVLGLTLAV 154



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V +   + ++  +P+G+++           P  +  +        + P  +    +
Sbjct: 16  TLRMVAIAAGLGTLFGLPLGVFLATSGRGELFAAPWANRVLGILVNATRSTPFIILVVAI 75

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     V+   +  N     L +  T + I   V            E A +F  +  +  
Sbjct: 76  IPFTRLVAGTSIGTNAATVPLTVAATPF-IARLVEGAIREVDAGLVEAARAFGASPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITAC 514
             +++P   P  V G   A 
Sbjct: 135 LKVLIPEALPGIVLGLTLAV 154


>gi|21221379|ref|NP_627158.1| permease membrane protein [Streptomyces coelicolor A3(2)]
 gi|256787440|ref|ZP_05525871.1| permease membrane component [Streptomyces lividans TK24]
 gi|289771338|ref|ZP_06530716.1| permease membrane component [Streptomyces lividans TK24]
 gi|4761216|gb|AAD29280.1|AF112365_3 ProWL [Streptomyces coelicolor A3(2)]
 gi|5531381|emb|CAB51013.1| putative permease membrane component [Streptomyces coelicolor
           A3(2)]
 gi|289701537|gb|EFD68966.1| permease membrane component [Streptomyces lividans TK24]
          Length = 290

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 16/236 (6%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
            ++++++  +    ++                N      V   +W     +   V+    
Sbjct: 50  WRKLTFLPVVLIAVLLATWLWFRQADLDALSQNALGNGQVTKALWQH---VQLTVISTFF 106

Query: 397 ASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454
             II IP+GI +  R     +     FA +  A PA     L+V  +        + + +
Sbjct: 107 VLIIAIPLGILLTRRAFRKATPFAMAFANMGQATPAIGLLALLVIWLGIGRRAALIGIIV 166

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             +      +L N IAG  A      E A    ++       + LP   P  + G  TA 
Sbjct: 167 YAVL----PVLSNTIAGLKANDPTLLEAARGIGMSPLGVLTRVELPLAVPLILAGVRTAL 222

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 + ++     G + +        I         P +VLG ++     L ++
Sbjct: 223 VLNVGTATLATFGGGGGLGV-------LITTGITSQRMPVLVLGSILTVALALLVD 271



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 57/184 (30%), Gaps = 10/184 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
                    +  ++  +L          D+  +    L    + +   +     + +   
Sbjct: 47  RVGWRKLTFLPVVLIAVLLATWLWFRQADLDALSQNALGNGQVTKALWQHVQLTVISTFF 106

Query: 79  SLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
            L+       L  +   R+     +   ++ Q+ P +G L   V++        +IG   
Sbjct: 107 VLIIAIPLGILLTRRAFRKATPFAMAFANMGQATPAIGLLALLVIWLGIGRRAALIG--- 163

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
                I    V  +  +    L      L E +R   +S       + +P ++P ++  +
Sbjct: 164 -----IIVYAVLPVLSNTIAGLKANDPTLLEAARGIGMSPLGVLTRVELPLAVPLILAGV 218

Query: 197 MMSM 200
             ++
Sbjct: 219 RTAL 222


>gi|86151687|ref|ZP_01069901.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124135|ref|YP_004066139.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85841316|gb|EAQ58564.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315017857|gb|ADT65950.1| phosphate ABC transporter, permease protein PstA, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 362

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++  
Sbjct: 265 LPLAMPMILTGSILTLAQA 283



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I     A
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAQA 283


>gi|168186805|ref|ZP_02621440.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum C str. Eklund]
 gi|169295251|gb|EDS77384.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum C str. Eklund]
          Length = 297

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 68/160 (42%), Gaps = 7/160 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + L  L A++IS   +   +        +  G  L P +++   IP + +    +T  V 
Sbjct: 80  SILVTLGAIIISTPLSIALSIFINIISPKIGGRFLKPAMELFVGIPSVVYGWLGITLLVP 139

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++ G   G  L++I  +    +  +T     ++ +IP+   E S     + WQ   
Sbjct: 140 AIKSIFKGIGFGL-LSSIIVLSIMILPTITSISSDAIKSIPKRYIEASYGLGATRWQTIV 198

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + +P S  G++  +++ M+  +   +A +M++      P
Sbjct: 199 KVIIPSSKNGILTAIILGMARAFGEALAVQMLIGNSIKFP 238



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS-S 416
            +  ++     N   +  ++++     +T+  +++   ++  + I + I     P I   
Sbjct: 56  FLLKKTWNPESNRAEFGALIFISGSILVTLGAIIISTPLSIALSIFINII---SPKIGGR 112

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI- 469
            ++P  +L    P+ V+  L ++ +       +  +   L  S++++       + ++  
Sbjct: 113 FLKPAMELFVGIPSVVYGWLGITLLVPAIKSIFKGIGFGLLSSIIVLSIMILPTITSISS 172

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
               + P  + E +     T W+    +I+P      +T  I     A+  ++  ++   
Sbjct: 173 DAIKSIPKRYIEASYGLGATRWQTIVKVIIPSSKNGILTAIILGMARAFGEALAVQMLIG 232

Query: 530 GHI 532
             I
Sbjct: 233 NSI 235


>gi|300857475|ref|YP_003782458.1| hypothetical protein cpfrc_00058 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300684929|gb|ADK27851.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302205212|gb|ADL09554.1| Choline transport system permease protein [Corynebacterium
           pseudotuberculosis C231]
 gi|302329770|gb|ADL19964.1| Choline transport system permease protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275452|gb|ADO25351.1| Choline transport system permease protein [Corynebacterium
           pseudotuberculosis I19]
          Length = 212

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 84/209 (40%), Gaps = 15/209 (7%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              A+      + A++IS+  +      AA++ R+G ++V    +  +IP L  L     
Sbjct: 12  LDMAAAHLFLSIPAILISIAVSIPIGMFAARNPRVGNLVVSAASLAYTIPALPMLILV-- 69

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                  G  + ++   I A+    V  +  +   +  +IP D+   + +  +S  Q   
Sbjct: 70  ---PFIVGVPLRSDTNVIIALCIYGVALLARTATDAFRSIPEDVRMSASAQGMSAPQVAL 126

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P L+  + +         V++  +V    +I +  +G+      +      +
Sbjct: 127 KVDLPLAIPVLISGIRV-------LGVSTIGLVTIGALIGVSSLGTLFTDGFQRNITAEV 179

Query: 242 LYAMLTMLGVIFLYDQL---LFRPMIVWS 267
           L  +  ++ +  L+D L   L R +  WS
Sbjct: 180 LTGIGAVVILAVLFDVLCLILQRVLAPWS 208



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 8/197 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
             YV+ +    +F  +  I+I+  + IP+G++    P + + +   A L    PA     
Sbjct: 8   WPYVLDMAAAHLFLSIPAILISIAVSIPIGMFAARNPRVGNLVVSAASLAYTIPALPMLI 67

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           LV   V     +    +  L I+G    +         + P D +  AS+  ++  +   
Sbjct: 68  LVPFIVGVPLRSDTNVIIALCIYGVA-LLARTATDAFRSIPEDVRMSASAQGMSAPQVAL 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  ++G     G +    +           +  + LG    +  ++    EV
Sbjct: 127 KVDLPLAIPVLISGIRV-LGVSTIGLVTIGAL------IGVSSLGTLFTDGFQRNITAEV 179

Query: 556 VLGVLIMCCFVLALNRF 572
           + G+  +    +  +  
Sbjct: 180 LTGIGAVVILAVLFDVL 196


>gi|328955365|ref|YP_004372698.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Coriobacterium glomerans PW2]
 gi|328455689|gb|AEB06883.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Coriobacterium glomerans PW2]
          Length = 312

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 9/152 (5%)

Query: 79  SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY---FMNLYPG 129
           +L+         A       + R+  ++ P +D++  IP + +  F +V    F+    G
Sbjct: 105 ALVLGVPLGIGTAVYLTEIATERVRGIVSPAVDLLAGIPSIIYGFFGMVIIRPFVAAVSG 164

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +    L A F +    V  +T     +L +IP  + E S +   + WQ  + + +P + 
Sbjct: 165 GLGFGALTAWFVLAIMIVPTITTLTMDALRSIPMGIREASFAMGATKWQTIYKVVLPAAR 224

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            G+V  +++ M       +A  M+V    VIP
Sbjct: 225 FGIVDAIVLGMGRAIGETMAVLMVVGNAPVIP 256



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 392 VLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLV 437
           V+ + A ++ +P+GI             +   + P   LLA  P+ ++         P V
Sbjct: 100 VVTLGALVLGVPLGIGTAVYLTEIATERVRGIVSPAVDLLAGIPSIIYGFFGMVIIRPFV 159

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
            +              +L I      I    +    + P   +E + +   T W+    +
Sbjct: 160 AAVSGGLGFGALTAWFVLAIMI-VPTITTLTMDALRSIPMGIREASFAMGATKWQTIYKV 218

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +LP      V   +   G A   ++   +       +  +
Sbjct: 219 VLPAARFGIVDAIVLGMGRAIGETMAVLMVVGNAPVIPGS 258


>gi|183602046|ref|ZP_02963415.1| probable permease of ABC transporter system for sugars
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682955|ref|YP_002469338.1| permease of ABC transporter system for sugars [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190532|ref|YP_002967926.1| sugar ABC transporter permease [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195938|ref|YP_002969493.1| sugar ABC transporter permease [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218931|gb|EDT89573.1| probable permease of ABC transporter system for sugars
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620605|gb|ACL28762.1| probable permease of ABC transporter system for sugars
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248924|gb|ACS45864.1| sugar ABC transporter permease [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250492|gb|ACS47431.1| sugar ABC transporter permease [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289178266|gb|ADC85512.1| Sugar transport system permease protein [Bifidobacterium animalis
           subsp. lactis BB-12]
 gi|295793519|gb|ADG33054.1| sugar ABC transporter permease [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 326

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 7/227 (3%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+F V+V    A+++ I  G  +
Sbjct: 83  FTSTFGLGFGKTFALWDNIKTVFTYQDGIFGRWF-LNTLFYVIVGAGGATLLAIMGGYAL 141

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   L    W  ++    + + +   
Sbjct: 142 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLM 201

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A     +  R +  + LP + P  VT A+      W N  +   +
Sbjct: 202 WIFSEQAVPTELLEAARVDGASEARTFFTVALPLLSPGIVTCALFTIVATWNNYFLPLIM 261

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG----SFPEVVLGVLIMCCFVLAL 569
               + +  T GL  +  +++  G        +   ++ +   V+A 
Sbjct: 262 LKDANWYPLTIGLNQWKDQASTAGGQAIQNLVITGSMITIIPLVVAF 308



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T   ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 114 RWFLNTLFYVIVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 173

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R    S  + F+
Sbjct: 174 LFAKLGLTNTP----WAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGASEARTFF 229

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 230 TVALPLLSPGIVTCALFTIVATWN 253


>gi|317123454|ref|YP_004097566.1| binding-protein-dependent transporters inner membrane component
           [Intrasporangium calvum DSM 43043]
 gi|315587542|gb|ADU46839.1| binding-protein-dependent transport systems inner membrane
           component [Intrasporangium calvum DSM 43043]
          Length = 215

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 76/213 (35%), Gaps = 15/213 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +  +   A +        +V+ LL       LAA+   L   L+    ++ +IP L    
Sbjct: 8   LGEILSRAGQHAWLAGIPLVLGLLIALPLGWLAARKAWLKGPLLSGTGLLYTIPSLALFI 67

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                 +     + I   +  I A+    V  +T ++  +L ++       + +    G+
Sbjct: 68  L-----LPSILKRGILDPVNVIVAMTIYTVALLTRTVADALSSVDPSTRAAATAMGYGGF 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +F  + +P ++P L   + ++       V  + +I V         +G ++        
Sbjct: 123 ARFRAVDLPLAVPVLAAGLRVAAVSNVSIVSVASLIGVNQ-------LGYFLTNGYARSF 175

Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267
              +   ++  + +  ++D     + R +  W+
Sbjct: 176 ATEVWVGIIACVALAVVFDVAIHGIARLLTPWA 208



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 65/180 (36%), Gaps = 8/180 (4%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +++  +I +P+G     +  +   +     LL   P+   F L+ S +    L+P + + 
Sbjct: 26  LVLGLLIALPLGWLAARKAWLKGPLLSGTGLLYTIPSLALFILLPSILKRGILDP-VNVI 84

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + M   T   +   V    S+     +  A++    G+  +R + LP   P    G   A
Sbjct: 85  VAMTIYTVALLTRTVADALSSVDPSTRAAATAMGYGGFARFRAVDLPLAVPVLAAGLRVA 144

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +   V+ +            LG ++     +    EV +G++      +  +  +
Sbjct: 145 AVSNVSIVSVASLIGVNQ-------LGYFLTNGYARSFATEVWVGIIACVALAVVFDVAI 197


>gi|224025706|ref|ZP_03644072.1| hypothetical protein BACCOPRO_02447 [Bacteroides coprophilus DSM
           18228]
 gi|224018942|gb|EEF76940.1| hypothetical protein BACCOPRO_02447 [Bacteroides coprophilus DSM
           18228]
          Length = 266

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 98/258 (37%), Gaps = 10/258 (3%)

Query: 3   LYNILPPFISRRIFP-NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           + N+   F SR+ +        A  ++I +I IL++   +      + +         ++
Sbjct: 1   MNNLRIFFSSRKSWTLPYLIFSAVFVIIPLILILVYAFTDDAGHLTLENFRKFFAHPEAV 60

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                 +    +   +  +L  +  A + ++S+      + +L I+   P+   +    +
Sbjct: 61  -NTFVYSIGIAILTTIGCILLGYPAAWILSQSKMSYSRTLILLFIL---PMWVNILIRTL 116

Query: 122 YFMNLYPG-KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             + L+   ++   E A IF +  + +  M + +Y +L  + R   E ++       Q F
Sbjct: 117 ATVALFDFLRLPLGEGALIFGMIYNYLPFMIYPIYNTLQKMDRSYIEAAQDLGAGSSQVF 176

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W +  P SMPG+V  +MM           +E++ + +  +     G+ I   I       
Sbjct: 177 WKVVFPLSMPGVVSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSLWNY 232

Query: 241 ILYAMLTMLGVIFLYDQL 258
                L ML +I +    
Sbjct: 233 GAALSLIMLFLIAVTSLF 250


>gi|294791223|ref|ZP_06756380.1| putative ABC-type sugar transport system, permease component
           [Scardovia inopinata F0304]
 gi|294457694|gb|EFG26048.1| putative ABC-type sugar transport system, permease component
           [Scardovia inopinata F0304]
          Length = 333

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 3/207 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     IV  FTYQ  ++  W    T+  VVV    A+++ I  G  +
Sbjct: 90  FVSTFGLGFGHTFALWDNIVATFTYQGGIFTRWF-LNTLLYVVVGAGGATLLAIMGGYAL 148

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +   +    W  ++    + + +   
Sbjct: 149 AKFRFPGRKAVFAIIIGSISVPGIALAVPQFLLFAKIGITDTPWAMIIPSLISPFGLYLM 208

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A        R +  + LP + P  VT A+      W N  +   +
Sbjct: 209 WIFSEQAVPTELLEAARVDGAGEMRTFFTVALPLLAPGIVTTALFTIVATWNNYFLPLIM 268

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFP 553
                 +  T GL  +  ++   G+ P
Sbjct: 269 LKDSTWYPLTIGLNQWNKQANTAGAQP 295



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  I+    S+P +       +
Sbjct: 121 RWFLNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAIIIGSISVPGIALAVPQFL 180

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           A+        + +      S   +P +L E +R       + F+
Sbjct: 181 LFAKIGITDTP----WAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGAGEMRTFF 236

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 237 TVALPLLAPGIVTTALFTIVATWN 260


>gi|237713669|ref|ZP_04544150.1| putrescine transport system permease potH [Bacteroides sp. D1]
 gi|229446391|gb|EEO52182.1| putrescine transport system permease potH [Bacteroides sp. D1]
          Length = 258

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  ++I +  I+++   + +    + +         ++      +    +   ++ +L  
Sbjct: 16  AIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTLVCILLG 74

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +  A + + S+      + +L I+   + IL     TV  F       V   E A IF +
Sbjct: 75  YPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGM 131

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM    
Sbjct: 132 VYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSMPGVMSGIMMVFMP 191

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 192 TISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 243



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  +     I   +      H T  +            T    + 
Sbjct: 2   SSRKSWTLPYIIFSAIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAINTFVYSIG 61

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II +++ I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 62  IAIITTLVCILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 121

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 122 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSMPGV 181

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 182 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 237

Query: 567 LALNRF 572
            A + F
Sbjct: 238 AATSLF 243


>gi|332638968|ref|ZP_08417831.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Weissella cibaria KACC 11862]
          Length = 487

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 20/207 (9%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRR-----LGMVLVPILDIMQSIPILGFLTF 118
           Y  + T+  +   VI + F  V   L A  +      L    V  ++ ++ +P+L  +  
Sbjct: 279 YFVKGTINTVGLAVIGVFFGIVLGILLALMKLSSVKPLKWFAVAYIEAVRGVPLL--IQV 336

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VYF     G  + + +A   A+F +    +   +   +  +P    E +RS   +  Q
Sbjct: 337 FIVYFGTQVIGLNVSSFMAGAIAMFLNSAAYVAEIIRSGIQAVPAGQTEAARSLGFTKMQ 396

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVV----ASEMIVVGDTVIPLPGIGSYIALAIK 234
              Y+ +P +    + N++ ++   +  V+       +I VG+           +     
Sbjct: 397 TMRYMVLPQA----IKNILPALGNEFVTVIKEGSVVSVIGVGELTFQTS-----VVQGAS 447

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFR 261
            +  + ++ +      + F   +LL R
Sbjct: 448 FKPFIPLIISAAIYFILTFGISRLLGR 474



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 24/204 (11%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSK--IQPFAQL-LAAFPANVFFPLVVSCVSY 443
             +  +  +  ++I +  GI +G    +     ++P     +A   A    PL++     
Sbjct: 280 FVKGTINTVGLAVIGVFFGIVLGILLALMKLSSVKPLKWFAVAYIEAVRGVPLLIQVFIV 339

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA--------GASAFPNDFKEVASSFHITGWRWWR 495
           Y     + L++         +  N  A        G  A P    E A S   T  +  R
Sbjct: 340 YFGTQVIGLNVSSFMAGAIAMFLNSAAYVAEIIRSGIQAVPAGQTEAARSLGFTKMQTMR 399

Query: 496 YIILPGIFPYYVTGAITACGGAWNASI----VSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           Y++LP      +     A G  +   I    V  V   G +  +T+     + +      
Sbjct: 400 YMVLPQAIKNILP----ALGNEFVTVIKEGSVVSVIGVGELTFQTS-----VVQGASFKP 450

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           F  +++   I       ++R L  
Sbjct: 451 FIPLIISAAIYFILTFGISRLLGR 474


>gi|121729416|ref|ZP_01682061.1| phosphate ABC transporter, permease protein [Vibrio cholerae V52]
 gi|121628642|gb|EAX61116.1| phosphate ABC transporter, permease protein [Vibrio cholerae V52]
          Length = 327

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 49  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALYGVATM 108

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 109 IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 168

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 169 IVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 228

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 229 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 266



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 95  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 154

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+    +    N  L   +++       ++        A P  
Sbjct: 155 GIPSVVYGFFGLVIIVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 214

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 215 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 274

Query: 539 L 539
           L
Sbjct: 275 L 275


>gi|310826573|ref|YP_003958930.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium limosum KIST612]
 gi|308738307|gb|ADO35967.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium limosum KIST612]
          Length = 219

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDI 106
           +  ++ +     +T    L++ +IS +       +              +  +L  I++I
Sbjct: 4   STMINMIWWGLLQTLYMTLASTLISYVLGIPMGVILVACDKDGVKPLPIVHKILDIIVNI 63

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP L  L   V+       G  IG+  A I  +  +    +   +  SL  + + L 
Sbjct: 64  TRSIPFLILL-IAVIPITRFITGTTIGSN-ATIVPLVMAAAPFIARMVESSLREVDKGLI 121

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           E S S   S +Q    + +P + P L+    +S
Sbjct: 122 EASLSMGASPFQVICKVLLPEAKPSLIVGAAIS 154



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 66/179 (36%), Gaps = 13/179 (7%)

Query: 376 VLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLA 426
           ++ +IW G + T++  +   +I+ ++ IP+G+ +           P +   +     +  
Sbjct: 6   MINMIWWGLLQTLYMTLASTLISYVLGIPMGVILVACDKDGVKPLPIVHKILDIIVNITR 65

Query: 427 AFPANVFFPLVVS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           + P  +    V+     ++   +  N  +  L++    + I   V +          E +
Sbjct: 66  SIPFLILLIAVIPITRFITGTTIGSNATIVPLVMAAAPF-IARMVESSLREVDKGLIEAS 124

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            S   + ++    ++LP   P  + GA  +       S ++ +   G +       G Y
Sbjct: 125 LSMGASPFQVICKVLLPEAKPSLIVGAAISTTTILGYSAMAGIVGGGGLGDIAIRYGYY 183


>gi|288934378|ref|YP_003438437.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288889107|gb|ADC57425.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 245

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 18/246 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++ G+       S  +               L     + VV   + A+++ 
Sbjct: 9   WWLIALFIGLLVGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVASSLAATVVG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  G+ +       S  +P  + +AA     P      + V  + +  L   + L+L  I
Sbjct: 69  LGAGVAV--TRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIALALYGI 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  + P+    VA    ++GW+    + LP   P  + G  T+    
Sbjct: 127 L----PVLQGTLAGLGSIPSGVSGVAEGMGMSGWQRLYKVELPLAAPVILAGIRTSVIVN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   +V G L++    + ++R     L
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRTF-ERL 234

Query: 578 YLYGTR 583
             + +R
Sbjct: 235 TRWISR 240



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMN 125
             ++++ + + +         A +R  G    P+++    I Q+ P +  L   V     
Sbjct: 55  WLVVASSLAATVVG--LGAGVAVTRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLG- 111

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L A+ A+    +  +       L +IP  +  V+    +SGWQ+ + + +
Sbjct: 112 -------FGWLPALIALALYGILPVLQGTLAGLGSIPSGVSGVAEGMGMSGWQRLYKVEL 164

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  +  S+         +  +           +G+ I + +   +   I+   
Sbjct: 165 PLAAPVILAGIRTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGA 217

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFR 271
           L +     + D+  F  +  W ++ R
Sbjct: 218 LLVALAAIIVDR-TFERLTRWISRHR 242


>gi|16124546|ref|NP_419110.1| phosphate ABC transporter permease [Caulobacter crescentus CB15]
 gi|221233232|ref|YP_002515668.1| phosphate transport system permease protein PstA [Caulobacter
           crescentus NA1000]
 gi|13421432|gb|AAK22278.1| phosphate ABC transporter, permease protein [Caulobacter crescentus
           CB15]
 gi|220962404|gb|ACL93760.1| phosphate transport system permease protein pstA [Caulobacter
           crescentus NA1000]
          Length = 431

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 74/202 (36%), Gaps = 26/202 (12%)

Query: 75  AMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            ++I+ L +     LAA        K+R    ++   ++ + ++P + +    +  F+N 
Sbjct: 219 MLLITALISVPVGVLAAVYLEEFAPKNRW-TDIIEVNINNLAAVPSIVYGLLGLALFINW 277

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                 G+ L     +    +  +  +   +L  +P  + E +     S  Q  ++  +P
Sbjct: 278 L-NVPRGSPLVGGLVLALMALPTVIIATRSALKAVPPSIREAALGVGASKTQTVFHHVLP 336

Query: 187 FSMPGLVWNMMMSMSGGW-------------FFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +MPG++   ++S++                F     E      TV+P+     +I    
Sbjct: 337 LAMPGVMTGAILSLAHALGETAPLLMIGMVSFVPGVPEGFTSAATVLPVQ---VFIWENA 393

Query: 234 KEQDLLAILYAMLTMLGVIFLY 255
            E+       A + +L V  + 
Sbjct: 394 SERAFHERTAAAIIVLLVFMIV 415



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 75/202 (37%), Gaps = 23/202 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
            ++++I ++I +PVG+               +  I+     LAA P+ V+      L ++
Sbjct: 217 AMMLLITALISVPVGVLAAVYLEEFAPKNRWTDIIEVNINNLAAVPSIVYGLLGLALFIN 276

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    +P +   +L +      ++    +   A P   +E A     +  +   + +L
Sbjct: 277 WLNVPRGSPLVGGLVLALM-ALPTVIIATRSALKAVPPSIREAALGVGASKTQTVFHHVL 335

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGA---------YIA-ESTE 548
           P   P  +TGAI +   A   +    +            G  +         +I   ++E
Sbjct: 336 PLAMPGVMTGAILSLAHALGETAPLLMIGMVSFVPGVPEGFTSAATVLPVQVFIWENASE 395

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           +         ++++  F++ +N
Sbjct: 396 RAFHERTAAAIIVLLVFMIVMN 417


>gi|323340415|ref|ZP_08080672.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323092191|gb|EFZ34806.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 295

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +K      VL   ++I+ S+P +    F  ++F+  +  K+  + LA   A+    +  +
Sbjct: 91  SKDNWFTQVLRTTIEILSSLPSIVVGLFGYLFFVIKF--KMGFSILAGALALTFFNLPLL 148

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           T ++  SL ++P+   E   S  LS W+    + +P ++PG++  +++S  
Sbjct: 149 TRNIEDSLRDVPQLQREAGASLGLSEWKTIKGIVLPAALPGILTGVILSAG 199



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN----- 467
             +  ++   ++L++ P+     +VV    Y        +   ++ G      FN     
Sbjct: 95  WFTQVLRTTIEILSSLPS-----IVVGLFGYLFFVIKFKMGFSILAGALALTFFNLPLLT 149

Query: 468 --VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             +       P   +E  +S  ++ W+  + I+LP   P  +TG I + G  +  +    
Sbjct: 150 RNIEDSLRDVPQLQREAGASLGLSEWKTIKGIVLPAALPGILTGVILSAGRVFGEAAALI 209

Query: 526 VASWGHIHLRTTG 538
             +         G
Sbjct: 210 YTAGQSAPAVDYG 222


>gi|255527424|ref|ZP_05394297.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296187453|ref|ZP_06855848.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255508870|gb|EET85237.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium carboxidivorans P7]
 gi|296047975|gb|EFG87414.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 220

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T   +  + ++ +   F    +           ++ +  VL  ++++++S P    L
Sbjct: 18  LGETVRMVFISGMLGIFLGFFVGIILVICDDNGLQPNKFIHRVLDTVVNVIRSFP-FVIL 76

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +++    +  G  IG E AAI  + T+    +      S   +   L E ++SF  S 
Sbjct: 77  MISIIPLTRIITGSSIGQE-AAIVPLTTAITPFIARIFQSSFKEVDPALIEAAKSFGASN 135

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
            Q  + + +  ++P ++  M +++
Sbjct: 136 KQIIFNVMLVEALPSIISGMSLAI 159



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 18/162 (11%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------------RPHIS 415
           ++ +T  +++ ++ L    +   V ++ I+ ++ I +G ++G                I 
Sbjct: 1   MSDYTLTEIINMLILPA--LGETVRMVFISGMLGIFLGFFVGIILVICDDNGLQPNKFIH 58

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
             +     ++ +FP  +    ++     ++   +     +  L    T + I     +  
Sbjct: 59  RVLDTVVNVIRSFPFVILMISIIPLTRIITGSSIGQEAAIVPLTTAITPF-IARIFQSSF 117

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                   E A SF  +  +    ++L    P  ++G   A 
Sbjct: 118 KEVDPALIEAAKSFGASNKQIIFNVMLVEALPSIISGMSLAI 159


>gi|318041762|ref|ZP_07973718.1| putative phosphate ABC transporter [Synechococcus sp. CB0101]
          Length = 318

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 100/281 (35%), Gaps = 34/281 (12%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             R    +   +  ++++GI+  +L G  +      +  I     D       A      
Sbjct: 25  GFRQLSVLLASIVGLVLVGILLTVLTGAHQAIGAFGLRFITTSDWDPIGNSYGAFTAIYG 84

Query: 72  MLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTV- 120
            L   +++L+         A         R L   L  +++++ +IP +    +  F + 
Sbjct: 85  TLITSILALVIAVPLGVGTAIFITENLIPRWLRQALGLMVELLAAIPSVVLGLWAIFVME 144

Query: 121 -------------VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLE 166
                        + ++  +     G  +A    I    +  +  ++   SL  +P +L 
Sbjct: 145 PFLRPLLEALHVYLGWIPFFSTTAQGPGVAPAILILVVMILPIITAISRDSLQQVPPELR 204

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----L 222
           + +     + W     + +P ++ G+   +M+++       +A  MI+            
Sbjct: 205 QAAYGVGTTRWGAILRVILPAAVSGITGGVMLALGRAMGETMAVTMIIGNSNNFSWSLLA 264

Query: 223 PG--IGSYIALAIKEQD---LLAILYAMLTMLGVIFLYDQL 258
           PG  I S +A    E D   + A++YA L ++ +  + + L
Sbjct: 265 PGNTISSMLANQFGEADGFQVSALMYAALVLMILTLVVNIL 305



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 39/307 (12%)

Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376
            R          + F QL         L +    +        A  + G      +  D 
Sbjct: 12  LRRRPPSEKLVDQGFRQLSVLLASIVGLVLVGILLTVLTGAHQAIGAFGLRFITTSDWDP 71

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFP 429
           +   +     ++  ++  I+A +I +P+G+              +   +    +LLAA P
Sbjct: 72  IGNSYGAFTAIYGTLITSILALVIAVPLGVGTAIFITENLIPRWLRQALGLMVELLAAIP 131

Query: 430 ANV-------------------------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           + V                         + P   +      + P + + ++MI      I
Sbjct: 132 SVVLGLWAIFVMEPFLRPLLEALHVYLGWIPFFSTTAQGPGVAPAILILVVMILPIITAI 191

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
                      P + ++ A     T W     +ILP        G + A G A   ++  
Sbjct: 192 ---SRDSLQQVPPELRQAAYGVGTTRWGAILRVILPAAVSGITGGVMLALGRAMGETMAV 248

Query: 525 EVASWGHIHLRTTGL--GAYI--AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
            +      +   + L  G  I    + + G      +  L+    VL +   + + L  +
Sbjct: 249 TMIIGNSNNFSWSLLAPGNTISSMLANQFGEADGFQVSALMYAALVLMILTLVVNILAQW 308

Query: 581 GTRCLRL 587
             R L L
Sbjct: 309 IVRRLSL 315


>gi|260663065|ref|ZP_05863958.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
 gi|260552686|gb|EEX25686.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum
           28-3-CHN]
          Length = 311

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T L  + A   +L        LA   +R   ++  +++++  IP + +    L   V   
Sbjct: 97  TLLAAVVATPFALAIALFTTELA--PKRSRGLIQSMVELLVGIPSVVYGFIGLAVLVPVI 154

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            NL+ G   G  L A   +F   +  +T    +SL ++PRD    S +   + WQ    +
Sbjct: 155 RNLFGGTGSGI-LTATLVLFVMILPTITSLTIESLRSVPRDYRSASFALGATMWQTMHRV 213

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            +  ++PG++  ++  M+  +   +A +M++  
Sbjct: 214 ILRAALPGILTAVIFGMARAFGEALAVQMVIGN 246



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 13/159 (8%)

Query: 394 IIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSCV-- 441
            ++A+++  P  + I               IQ   +LL   P+ V+      ++V  +  
Sbjct: 97  TLLAAVVATPFALAIALFTTELAPKRSRGLIQSMVELLVGIPSVVYGFIGLAVLVPVIRN 156

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +      +  + L++F      + +  I    + P D++  + +   T W+    +IL 
Sbjct: 157 LFGGTGSGILTATLVLFVMILPTITSLTIESLRSVPRDYRSASFALGATMWQTMHRVILR 216

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              P  +T  I     A+  ++  ++       + T+ +
Sbjct: 217 AALPGILTAVIFGMARAFGEALAVQMVIGNAAVMPTSLI 255


>gi|226310063|ref|YP_002769957.1| phosphate ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093011|dbj|BAH41453.1| probable phosphate ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 315

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 78/181 (43%), Gaps = 17/181 (9%)

Query: 98  MVLVPILDIMQSIPIL--GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
            VL P+++++  IP +  G++  T++         V+G  L A   +    +     S+ 
Sbjct: 130 KVLKPVIELLVGIPSVVYGYVGLTLLVPFIREQFDVLGFSLLAGGLVLALMILPTITSVA 189

Query: 156 -QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             ++  +P+DL   S +   + WQ  W + +  ++PG +  +++ MS  +   +A +M++
Sbjct: 190 ADAIEAVPQDLRNASLALGATRWQTIWNVVLHSALPGCLTAIVLGMSRAFGEALAVQMVI 249

Query: 215 VGDTVIP----------LPGIGSYIALAIKEQDLLAILYA----MLTMLGVIFLYDQLLF 260
              T +P            GI   +   I+       L++    +L M  +  +  +LL 
Sbjct: 250 GNTTKLPSGLFEPISTLTSGITLNMGNTIQGTPYNNALWSMALLLLAMSFIFIVILRLLG 309

Query: 261 R 261
           R
Sbjct: 310 R 310



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 23/182 (12%)

Query: 416 SKIQPFAQLLAAFPANVF----FPLVVSCVS--YYHLNPNLWLSLLMIFGTQWYILFNVI 469
             ++P  +LL   P+ V+      L+V  +   +  L  +L    L++       + +V 
Sbjct: 130 KVLKPVIELLVGIPSVVYGYVGLTLLVPFIREQFDVLGFSLLAGGLVLALMILPTITSVA 189

Query: 470 A-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           A    A P D +  + +   T W+    ++L    P  +T  +     A+  ++  ++  
Sbjct: 190 ADAIEAVPQDLRNASLALGATRWQTIWNVVLHSALPGCLTAIVLGMSRAFGEALAVQMV- 248

Query: 529 WGHIHLRTTGL---------------GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            G+     +GL               G  I  +    +   + L +L M    + + R L
Sbjct: 249 IGNTTKLPSGLFEPISTLTSGITLNMGNTIQGTPYNNALWSMALLLLAMSFIFIVILRLL 308

Query: 574 WH 575
             
Sbjct: 309 GR 310


>gi|147678008|ref|YP_001212223.1| ABC-type phosphate transport system, permease component
           [Pelotomaculum thermopropionicum SI]
 gi|146274105|dbj|BAF59854.1| ABC-type phosphate transport system, permease component
           [Pelotomaculum thermopropionicum SI]
          Length = 305

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 68/158 (43%), Gaps = 5/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF---TVVYFM 124
           +TL ++ +  +S+        +A        +L P ++++  IP + +       +V F+
Sbjct: 91  STLAVILSAPLSIACAVFMVEIA--PNWGQRLLRPAIEVLAGIPSVVYGYIGLSLLVPFI 148

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G +  + LA    +    +  +      SL  +PR+ +E + +   + WQ    + 
Sbjct: 149 RENIGGLGFSVLAGFLVLSLMIIPTIVGISADSLKALPREWKEAAYALGSTRWQAIRLVL 208

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P +  GL+  +++ ++  +   +A +M++     IP 
Sbjct: 209 LPAARSGLITGIVLGLARAFGEALAVQMVIGNTRKIPA 246



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 64/169 (37%), Gaps = 9/169 (5%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF-- 433
           + +V     ++   V++   ++    + + + I         ++P  ++LA  P+ V+  
Sbjct: 81  LAFVFGSVVVSTLAVILSAPLSIACAVFM-VEIAPN-WGQRLLRPAIEVLAGIPSVVYGY 138

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHI 488
             L +           L  S+L  F     ++   I G       A P ++KE A +   
Sbjct: 139 IGLSLLVPFIRENIGGLGFSVLAGFLVLSLMIIPTIVGISADSLKALPREWKEAAYALGS 198

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           T W+  R ++LP      +TG +     A+  ++  ++       +  +
Sbjct: 199 TRWQAIRLVLLPAARSGLITGIVLGLARAFGEALAVQMVIGNTRKIPAS 247


>gi|291613661|ref|YP_003523818.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
 gi|291583773|gb|ADE11431.1| binding-protein-dependent transport systems inner membrane
           component [Sideroxydans lithotrophicus ES-1]
          Length = 345

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 21/222 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-----SIPILGFLTF-- 118
            ++    L+  +I L+  +  A L A+S +    L+ +L I+       I I  ++    
Sbjct: 127 LKSFAMALATTLICLVMAYPLAMLIARSPKQSRNLMMLLVILPFTSNFLIGIYAWMIILG 186

Query: 119 ----------TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
                      ++      P +++ +  A + A+    +  M   +Y +L      L + 
Sbjct: 187 PQAALNHAVNALLGLFGAAPVQLLFSPFAVLVAMVYVYLPFMVLPLYTNLEKHDPVLLDA 246

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           ++    + WQ+FW +  P S PG+     +            E++     ++    IG+ 
Sbjct: 247 AQDLGANAWQRFWRVTFPLSRPGIFAGCALVFIPAIGMFAVPELLGGTGDIM----IGNL 302

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           I               +  +L +  L    L   +     ++
Sbjct: 303 IKEQFLGTRDWPFGSTLAILLTMAVLLVVWLVSRLSARGGRY 344



 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 68/239 (28%), Gaps = 32/239 (13%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+  ++  +  + F Y +V         +    +   +I  ++  P+ + I   P  S  
Sbjct: 107 GLTTETYRFFFSDFIYTEVF------LKSFAMALATTLICLVMAYPLAMLIARSPKQSRN 160

Query: 418 IQPFAQLLAAFPAN------VFFPLV-----------VSCVSYYHLNPNLWLSLLMIFGT 460
           +     +L  F +N       +  ++                +      L  S   +   
Sbjct: 161 LMMLLVIL-PFTSNFLIGIYAWMIILGPQAALNHAVNALLGLFGAAPVQLLFSPFAVLVA 219

Query: 461 QWYIL--FNVIAGASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             Y+   F V+   +          + A       W+ +  +  P   P    G      
Sbjct: 220 MVYVYLPFMVLPLYTNLEKHDPVLLDAAQDLGANAWQRFWRVTFPLSRPGIFAGCALVFI 279

Query: 516 GAWNASIVSEVASWGHIHLRTTGLG--AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            A     V E+       +    +            GS   ++L + ++   V  ++R 
Sbjct: 280 PAIGMFAVPELLGGTGDIMIGNLIKEQFLGTRDWPFGSTLAILLTMAVL-LVVWLVSRL 337


>gi|226322439|ref|ZP_03797957.1| hypothetical protein COPCOM_00210 [Coprococcus comes ATCC 27758]
 gi|225209161|gb|EEG91515.1| hypothetical protein COPCOM_00210 [Coprococcus comes ATCC 27758]
          Length = 295

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 58/142 (40%), Gaps = 2/142 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L      T L +L A+   +         A K  +   V+    + +  IP + +  F 
Sbjct: 81  ALINTVVMTLLSLLIAVPFGIFSAIFLVEYAGKGNKFIEVIRLTTETLSGIPSIVYGLFG 140

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F+N    K   + LA  F +    +  +     ++L  +P    E S        + 
Sbjct: 141 MLFFVNTL--KWGFSVLAGAFTLSIMILPLIMRQTEEALKAVPDSYREGSFGLGAGKLRT 198

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
            + + +P ++PG++  +++++ 
Sbjct: 199 VFRIVLPSAVPGILAGVILAIG 220



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 69/203 (33%), Gaps = 17/203 (8%)

Query: 387 MFRVVVLIIIASIIWIPVGI--------WIGFRPHISSKIQPFAQLLAAFPANVF--FPL 436
           +   VV+ +++ +I +P GI        + G        I+   + L+  P+ V+  F +
Sbjct: 82  LINTVVMTLLSLLIAVPFGIFSAIFLVEYAGKGNKFIEVIRLTTETLSGIPSIVYGLFGM 141

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +    +       L  +  +       I+        A P+ ++E +        R    
Sbjct: 142 LFFVNTLKWGFSVLAGAFTLSIMILPLIMRQTEEALKAVPDSYREGSFGLGAGKLRTVFR 201

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA-------YIAESTEK 549
           I+LP   P  + G I A G     +      +     +    LG+           S+E 
Sbjct: 202 IVLPSAVPGILAGVILAIGRIVGETAALIYTAGTVAQVPKNVLGSGRTLAIHMYMLSSEG 261

Query: 550 GSFPEVVLGVLIMCCFVLALNRF 572
               +     +I+   V+A+N  
Sbjct: 262 LYMNQAYATAVILLVLVVAINTL 284


>gi|260173872|ref|ZP_05760284.1| putative ABC transporter permease protein [Bacteroides sp. D2]
 gi|315922135|ref|ZP_07918375.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696010|gb|EFS32845.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 291

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S++    IF LL+  +V+ +  IL   I +                 +    +      T
Sbjct: 13  SQKFAFGIFRLLSLCIVLILFAILGFIIYKGIGAISWDFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   RL   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPIGVMSGIYMNEYAPKGRLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   +  GI   S  +I +  T       IW   + T + +V   + A  I 
Sbjct: 28  IVLILFAILGFIIYKGIGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFPIG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        +   I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGRLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|20089773|ref|NP_615848.1| phosphate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
 gi|19914712|gb|AAM04328.1| phosphate ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
          Length = 307

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 7   LPPFISRRIFPNIFDLLAFVL---VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           L    S RI   +  L A ++   V+ I+  +++          + +I  + +    +  
Sbjct: 25  LNARTSERIAFVLLGLSAMLVAGFVVIILAYIVYNGYSAINVEFLTEIPRMRMTQGGIYP 84

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
               T L ++ +M ++L    + A      A   R   ++   ++ +   P + F  F +
Sbjct: 85  AIVGTVLLIIGSMAVALPLGILAAVYLNEYAGETRTTWLIEMAINNLAGTPSVVFGLFGL 144

Query: 121 VYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             F+    +   ++ A L   F I       +  S  ++L  +P++  E S +  +S WQ
Sbjct: 145 ALFVKYFGFGSSILSASLTLSFLIIPV----IIRSSQEALIAVPKEYRESSLALGISKWQ 200

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS 201
              ++ +P ++PG+V   ++S+ 
Sbjct: 201 TIRHVVLPAAIPGIVTGSILSIG 223



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           L   +++R++++L      +V G  +     I +     I   F  +     +  G I  
Sbjct: 25  LNARTSERIAFVLLGLSAMLVAGFVVIILAYIVYNGYSAINVEFLTEIPRMRMTQGGIYP 84

Query: 388 FRVVVLIII--ASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPL 436
             V  +++I  +  + +P+GI               +  I+     LA  P+ VF  F L
Sbjct: 85  AIVGTVLLIIGSMAVALPLGILAAVYLNEYAGETRTTWLIEMAINNLAGTPSVVFGLFGL 144

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +    +   +  L  SL + F     I+ +      A P +++E + +  I+ W+  R+
Sbjct: 145 ALFVKYFGFGSSILSASLTLSFLIIPVIIRSSQEALIAVPKEYRESSLALGISKWQTIRH 204

Query: 497 IILPGIFPYYVTGAITACG 515
           ++LP   P  VTG+I + G
Sbjct: 205 VVLPAAIPGIVTGSILSIG 223


>gi|169824291|ref|YP_001691902.1| phosphate ABC transporter permease [Finegoldia magna ATCC 29328]
 gi|167831096|dbj|BAG08012.1| phosphate ABC transporter permease protein [Finegoldia magna ATCC
           29328]
          Length = 291

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 87/221 (39%), Gaps = 10/221 (4%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS 60
           L N+       RI      L+AF+ +  +  ++++ +                 + +V  
Sbjct: 13  LKNLRKNKTKSRIIKGFIYLMAFITLAVLFYLIIYMLVNGIPHLKPNMFSNHYTSKNVSM 72

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA----KSRRLGMVLVPILDIMQSIPILGFL 116
           +P     T + +L  ++I+       A   +    K+ ++  ++    + +  IP + + 
Sbjct: 73  MPS-IKTTIMLVLFTLLIASPIGIFTAIYLSEYSKKNSKVVTLIRLATETLSGIPSIVYG 131

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F ++ F+     K   + ++ +  +F   +  +  +  Q+L +I  +L   S +     
Sbjct: 132 LFGMLLFVMRL--KFRYSLISGVLTMFIMVLPLIIRASEQALLSIDDELRAGSYALGAGK 189

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
                 + +P +MPG++  +++S+        A+ M  +G 
Sbjct: 190 LYTIRKVLLPVAMPGIMAGIILSIGRV-VGETAALMFTLGT 229



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 14/201 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--------QDVLYVI 380
           +N  +  +  R+          +   V   +    +   + H              + ++
Sbjct: 14  KNLRKNKTKSRIIKGFIYLMAFITLAVLFYLIIYMLVNGIPHLKPNMFSNHYTSKNVSMM 73

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA----QLLAAFPANVF--F 434
                T+  V+  ++IAS I I   I++      +SK+        + L+  P+ V+  F
Sbjct: 74  PSIKTTIMLVLFTLLIASPIGIFTAIYLSEYSKKNSKVVTLIRLATETLSGIPSIVYGLF 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +        +   L M       I+        +  ++ +  + +         
Sbjct: 134 GMLLFVMRLKFRYSLISGVLTMFIMVLPLIIRASEQALLSIDDELRAGSYALGAGKLYTI 193

Query: 495 RYIILPGIFPYYVTGAITACG 515
           R ++LP   P  + G I + G
Sbjct: 194 RKVLLPVAMPGIMAGIILSIG 214


>gi|153007643|ref|YP_001368858.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
 gi|151559531|gb|ABS13029.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum anthropi ATCC 49188]
          Length = 398

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 9/179 (5%)

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--------NLYPGKVIG 133
                  +  +   L   ++  L+I+Q+IP +      +                G    
Sbjct: 207 VGIPLGLVCHRLAGLRAFVLNSLNIVQTIPSMALFGILIAPLGWVATQFPWAGAIGIRGI 266

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A  A+F   +  +  +    L  +P  + + +R   ++  Q+ +    P + P ++
Sbjct: 267 GAAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFKTEFPLAFPVIL 326

Query: 194 WNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
             + + M        +A+ +   G       GIG      +    L  +L A    + +
Sbjct: 327 TGIRIVMVQNIGLTTIAALIGGGGFGTFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 385



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 13/179 (7%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL----- 454
           + IP+G+       + + +     ++   P+   F ++++ + +         ++     
Sbjct: 207 VGIPLGLVCHRLAGLRAFVLNSLNIVQTIPSMALFGILIAPLGWVATQFPWAGAIGIRGI 266

Query: 455 -------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                   +   +   I+ N +AG +  P    + A    +T  +       P  FP  +
Sbjct: 267 GAAPAFVALFLYSLLPIVANTVAGLAQVPEPVTDAARGMGMTRLQRLFKTEFPLAFPVIL 326

Query: 508 TGAITACGGAWNA-SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           TG            +I + +   G       G+G    +    G+ P V+L        
Sbjct: 327 TGIRIVMVQNIGLTTIAALIGGGGFGTFVFQGIGQTAMDLVLLGALPTVLLAFAAAVIL 385


>gi|87311015|ref|ZP_01093140.1| phosphate ABC transporter, permease protein [Blastopirellula marina
           DSM 3645]
 gi|87286305|gb|EAQ78214.1| phosphate ABC transporter, permease protein [Blastopirellula marina
           DSM 3645]
          Length = 846

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 122 YFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +F +  P  V G      A   +    +  +  +  +SL  +P  L E S     S WQ 
Sbjct: 671 FFTSHLPNPVFGKGCLAWASITLALLTLPVVIVATEESLAAVPNSLREGSYGCGASKWQT 730

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGG 203
            W + +P ++PG++  M+++M+ G
Sbjct: 731 IWRIVLPHALPGIMTGMILAMARG 754



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
           W S+ +   T   ++       +A PN  +E +     + W+    I+LP   P  +TG 
Sbjct: 688 WASITLALLTLPVVIVATEESLAAVPNSLREGSYGCGASKWQTIWRIVLPHALPGIMTGM 747

Query: 511 ITAC 514
           I A 
Sbjct: 748 ILAM 751


>gi|291459269|ref|ZP_06598659.1| D-methionine ABC transporter, permease protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291418523|gb|EFE92242.1| D-methionine ABC transporter, permease protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 220

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 19/211 (9%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPL 436
            T++ V++   I+  I IP+G+         I     +   +     +    P  +   +
Sbjct: 16  ATLYMVLISSTISYAIGIPLGVILVATEQGGIAPCRIVHGILGFITNIFRTIPFLILLVM 75

Query: 437 VVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+     +    L P   +  L+I  +  YI   V +          E A S   + W+ 
Sbjct: 76  VLPLTKLLVGTTLGPRAIIPPLII-ASAPYIARMVESSLKEVDAGVIEAAKSMGASNWQI 134

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R ++LP   P    GA        + S ++     G +       G Y      +    
Sbjct: 135 IRMVLLPEARPSLYVGAAICITTILSYSAMAGFVGGGGLGAIALNYGYY------RYQTD 188

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            +++ V ++   V  +  F W  L     + 
Sbjct: 189 VMLIAVAVLILIVQLIQEF-WMRLAKETDKR 218



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 17/211 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T   +L +  IS         +         A  R +  +L  I +I ++IP L  L  
Sbjct: 16  ATLYMVLISSTISYAIGIPLGVILVATEQGGIAPCRIVHGILGFITNIFRTIPFLILL-V 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+    L  G  +G   A I  +  +    +   +  SL  +   + E ++S   S WQ
Sbjct: 75  MVLPLTKLLVGTTLGPR-AIIPPLIIASAPYIARMVESSLKEVDAGVIEAAKSMGASNWQ 133

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P + P L     + ++    +   +  +  G         G Y       +  
Sbjct: 134 IIRMVLLPEARPSLYVGAAICITTILSYSAMAGFVGGGGLGAIALNYGYY-------RYQ 186

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             ++   + +L +I    Q  +  +   ++K
Sbjct: 187 TDVMLIAVAVLILIVQLIQEFWMRLAKETDK 217


>gi|260460010|ref|ZP_05808263.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259034221|gb|EEW35479.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 288

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGF-LTFT 119
            +Y   + +  +++ VI++          A+ R R    +   L + +++P +   L   
Sbjct: 79  IEYFRNSLIISVTSTVIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLF 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +Y          G  LA +       +W +          +P+DL E ++    + WQ 
Sbjct: 139 FLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQA 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +    +   LP +G     A    D  
Sbjct: 195 FWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLP-VGLLDYTAEFTIDWR 253

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 254 GMCALAVVMIIPALTLTYIVQKHLV 278



 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 61/196 (31%), Gaps = 7/196 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSY 443
           ++   V   +IA  I +  G                  +L    P      PL    V  
Sbjct: 85  SLIISVTSTVIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRL 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             ++ +  L +L            +I G     P D  E A     T W+ +  +  P  
Sbjct: 145 GIIDTHFGL-ILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLA 203

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P   + AI A    WN  ++ S++           GL  Y AE T    +  +    ++
Sbjct: 204 GPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFT--IDWRGMCALAVV 261

Query: 562 MCCFVLALNRFLWHPL 577
           M    L L   +   L
Sbjct: 262 MIIPALTLTYIVQKHL 277


>gi|20095124|ref|NP_614971.1| ABC-type phosphate transport system, permease component
           [Methanopyrus kandleri AV19]
 gi|19888419|gb|AAM02901.1| ABC-type phosphate transport system, permease component
           [Methanopyrus kandleri AV19]
          Length = 594

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 6/146 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILG--- 114
            L      T    L A+VI+   + + AT  A+   R L   L P +D++  IP +    
Sbjct: 69  GLLPMIISTLYVTLIAVVIAFPISLLCATYLAEFAPRILRRTLRPAIDMLAGIPSVVYGL 128

Query: 115 FLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           F   T+V F   Y G   G + L A   +    +  MT  M +++  +PR+  E +    
Sbjct: 129 FGILTLVPFAREYLGAPTGYSVLVAGIIVAIMILPYMTSVMMEAMRAVPREYVEAALGMG 188

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS 199
            + WQ    +  P +  G+    M+ 
Sbjct: 189 ATRWQVVRTVLWPAARSGITAGGMLG 214



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 18/165 (10%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISS 416
             G +    +Y   L ++ +   T++    + +IA +I  P+ +             +  
Sbjct: 54  LFGTVWRPDSYPPRLGLLPMIISTLY----VTLIAVVIAFPISLLCATYLAEFAPRILRR 109

Query: 417 KIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            ++P   +LA  P+ V+         P     +        L   +++      Y+   +
Sbjct: 110 TLRPAIDMLAGIPSVVYGLFGILTLVPFAREYLGAPTGYSVLVAGIIVAIMILPYMTSVM 169

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +    A P ++ E A     T W+  R ++ P        G +  
Sbjct: 170 MEAMRAVPREYVEAALGMGATRWQVVRTVLWPAARSGITAGGMLG 214


>gi|305665602|ref|YP_003861889.1| phosphate ABC transporter permease [Maribacter sp. HTCC2170]
 gi|88710358|gb|EAR02590.1| phosphate ABC transporter permease protein [Maribacter sp.
           HTCC2170]
          Length = 292

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 84/222 (37%), Gaps = 18/222 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L    A+  +L      +   ++   +     + P+L+++ ++P + +    L     
Sbjct: 71  TLLTSFIAIAFALPIGLSISIYLSEYAPKSFRKSVKPLLELLAAVPTVVYGFFALVVVTP 130

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +   + P       L+A   +    +  ++     +L ++P  L E S     + +Q  +
Sbjct: 131 FLQEIIPNLSGFNSLSAGLVMGIMIIPYISSISEDALHSVPDSLREASYGMGSTKFQTAF 190

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV------GDTVIPLPGIGSYIALAI-- 233
            + VP +  G++ ++++++S      +   +          D  +P+  I +YI      
Sbjct: 191 KVIVPAASSGIIVSIILAISRAIGETMIVAVAAGQQPRLTLDPTVPIETITAYIVQVSLG 250

Query: 234 ----KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271
                  +   I  A +T+    FL + L +R    +  K+ 
Sbjct: 251 DVQHGSLEYRTIFAAGITLFAFTFLLNTLSYRIRKKYQEKYE 292



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 87/265 (32%), Gaps = 35/265 (13%)

Query: 346 IFWFCVVCGVAIGIAWQSIGY-----IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +    V  G+ + ++ +++ +     I++ FT      +       +  ++   ++ S I
Sbjct: 18  LVTIAVTVGIILVLSIEAVRFFSEVSIIHFFTDSQWTPLFTEKHFGILPLLSGTLLTSFI 77

Query: 401 WIPVGIWIGFR----------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVS 442
            I   + IG                  ++P  +LLAA P  V+         P +   + 
Sbjct: 78  AIAFALPIGLSISIYLSEYAPKSFRKSVKPLLELLAAVPTVVYGFFALVVVTPFLQEIIP 137

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 +L   L+M      YI         + P+  +E +     T ++    +I+P  
Sbjct: 138 NLSGFNSLSAGLVMGIMIIPYISSISEDALHSVPDSLREASYGMGSTKFQTAFKVIVPAA 197

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAEST------EKG 550
               +   I A   A   +++  VA+           +    + AYI + +         
Sbjct: 198 SSGIIVSIILAISRAIGETMIVAVAAGQQPRLTLDPTVPIETITAYIVQVSLGDVQHGSL 257

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWH 575
            +  +    + +  F   LN   + 
Sbjct: 258 EYRTIFAAGITLFAFTFLLNTLSYR 282


>gi|326203078|ref|ZP_08192944.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           papyrosolvens DSM 2782]
 gi|325986724|gb|EGD47554.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           papyrosolvens DSM 2782]
          Length = 297

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 74/181 (40%), Gaps = 5/181 (2%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +L++  +  LL+  +E      I+       +   +      +   +  +M+I++   
Sbjct: 22  IILLLLSFVGYLLYQGRERLNLHFIISSPVFMKEGGGIGPQLFNSLYIVFLSMIITVPIG 81

Query: 84  FVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                  ++  + G V   I   ++ + S+P +    F ++ F+++          A   
Sbjct: 82  LAAGVYLSEYSKPGKVTDIIRFCIEALASLPSIVIGLFGLLVFVSMTGWGYTLFSGALAV 141

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A+    V  +T     ++ N+P  ++E S +   + WQ  + + +P ++P LV  ++M+ 
Sbjct: 142 AVLNLPV--ITRISEDAIRNVPDTVKEASLAMGATHWQTIYKVIIPTALPALVTGLIMTS 199

Query: 201 S 201
            
Sbjct: 200 G 200



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 11/182 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGI 406
             ++      + +Q    +  HF     +++   G I   +F  + ++ ++ II +P+G+
Sbjct: 23  ILLLLSFVGYLLYQGRERLNLHFIISSPVFMKEGGGIGPQLFNSLYIVFLSMIITVPIGL 82

Query: 407 WIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMI 457
             G           ++  I+   + LA+ P+ V   F L+V              +L + 
Sbjct: 83  AAGVYLSEYSKPGKVTDIIRFCIEALASLPSIVIGLFGLLVFVSMTGWGYTLFSGALAVA 142

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 I           P+  KE + +   T W+    +I+P   P  VTG I   G  
Sbjct: 143 VLNLPVITRISEDAIRNVPDTVKEASLAMGATHWQTIYKVIIPTALPALVTGLIMTSGRV 202

Query: 518 WN 519
           + 
Sbjct: 203 FG 204


>gi|222084769|ref|YP_002543298.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221722217|gb|ACM25373.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 361

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 8/146 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L ++ I+++             RL  V++  L ++Q+IP L      ++    +      
Sbjct: 162 LGSVAIAIILALPLGIFCYWQPRLRAVVLRALSLVQTIPSLALFGILMLPLGYIAAHVPF 221

Query: 133 GAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            A +         A+ A+    +  +  +    L  +   + + +    L+  Q    + 
Sbjct: 222 AATIGVKGIGTAPALVALVIYSLLPIVANTVVGLAGVDPSVRDAAAGMGLTRRQILTRID 281

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVAS 210
           +P + P ++  + + +      V  +
Sbjct: 282 LPLAFPVILTGIRIVLVQAIGLVTVA 307



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 14/225 (6%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
                 L VI     +  ++L  +  +       +  ++  +       ++  +  +   
Sbjct: 87  GAFWVLLAVIGLVISDALVKLRLSPWLRVGSLALYAALLGVIFKSGLLDNLSIMKEYANN 146

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
            D  +   LG +  F  +  + IA I+ +P+GI+  ++P + + +     L+   P+   
Sbjct: 147 TDKFWNEGLGHV--FLALGSVAIAIILALPLGIFCYWQPRLRAVVLRALSLVQTIPSLAL 204

Query: 434 FPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKE 481
           F +++  + Y   +     ++             ++  +   I+ N + G +      ++
Sbjct: 205 FGILMLPLGYIAAHVPFAATIGVKGIGTAPALVALVIYSLLPIVANTVVGLAGVDPSVRD 264

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            A+   +T  +    I LP  FP  +TG       A     V+ +
Sbjct: 265 AAAGMGLTRRQILTRIDLPLAFPVILTGIRIVLVQAIGLVTVAAL 309


>gi|83319963|ref|YP_424188.1| spermidine/putrescine ABC transporter, permease protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283849|gb|ABC01781.1| spermidine/putrescine ABC transporter, permease protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 330

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +   +  +L++ I+ ++   I     P D + +  I+ +        + + 
Sbjct: 57  FSKDKVWPILAPFILVMLILVILPLVSILIYAFIQPADGITLFKISFEKFAKLFTSNGIL 116

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                + L  + A ++ +L  +  A + A+ +    +L   + ++ ++P+   +   V+ 
Sbjct: 117 YSLFLSILYAIVAGMLCVLIGYPIALMMAQMKS--KILARNMWVIVTMPMWISMLLKVLG 174

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              L+       IG  +A I  +    +      +Y SL +   DLEE +     S ++ 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  SMPG++    + +      ++    +  G   +    I SY      +    
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQG-NDFGYG 293

Query: 240 AILYAMLTMLGVIFLY 255
           A +  +L +L    + 
Sbjct: 294 AAVSVVLAILVFGLML 309



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 7/197 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +++   +V  ++  +I  P+ + +            +  +      ++   ++ 
Sbjct: 115 ILYSLFLSILYAIVAGMLCVLIGYPIALMMAQMKSKILARNMWVIVTMPMWISMLLKVLG 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-----ASAFPNDFKEVASSFHITGWRW 493
               +Y L      + + I     Y+              +   D +E A     + +R 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GS 551
           +  I L    P  +T        A  + IV      G I+L +  + +Y  +  +   G+
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQGNDFGYGA 294

Query: 552 FPEVVLGVLIMCCFVLA 568
              VVL +L+    ++ 
Sbjct: 295 AVSVVLAILVFGLMLVM 311


>gi|258404599|ref|YP_003197341.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfohalobium retbaense DSM 5692]
 gi|257796826|gb|ACV67763.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfohalobium retbaense DSM 5692]
          Length = 390

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISL--LFTFVYATLAAKS-------RRLGMVLVPILDIMQS 109
             LP+ A      + S  V+SL  LF+     + A          R    +   ++ + +
Sbjct: 160 SKLPEIAGIFAAVVGSIYVLSLTLLFSVPIGVMTAIYLEEFAPDNRFTQAIEVNINNLAA 219

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP + F    +  F+N + G    + +A    +    +  +  S   +L  +P  + E +
Sbjct: 220 IPSILFGLLGLAIFINFF-GVPRSSAMAGGLTLGLMTLPIIIISTRAALRAVPDSIREGA 278

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                S WQ  W+  +P S+PG++   ++ ++  
Sbjct: 279 YGVGASPWQVVWHHVLPLSLPGILTGTIIGLAQA 312



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 82/229 (35%), Gaps = 17/229 (7%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +A+ +  +        ++  +      +++ + + ++ +  I +   I++      +   
Sbjct: 148 LAFNTGFFTRGDSKLPEIAGIFAAVVGSIYVLSLTLLFSVPIGVMTAIYLEEFAPDNRFT 207

Query: 419 QPF---AQLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGA 472
           Q        LAA P+ +F  L ++    +   P    +   L +   T   I+ +  A  
Sbjct: 208 QAIEVNINNLAAIPSILFGLLGLAIFINFFGVPRSSAMAGGLTLGLMTLPIIIISTRAAL 267

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN----ASIVSEV-- 526
            A P+  +E A     + W+   + +LP   P  +TG I     A        IV  +  
Sbjct: 268 RAVPDSIREGAYGVGASPWQVVWHHVLPLSLPGILTGTIIGLAQAMGETAPLLIVGMMAY 327

Query: 527 --ASWGHIHLRTTGLGAYI--AESTEKGSFP-EVVLGVLIMCCFVLALN 570
              +   +    T L A I    +    ++       ++++   +L LN
Sbjct: 328 IPEAPSGVTDAATVLPAQIYTWSAASLRAYAERTAAAIIVLLAVLLTLN 376


>gi|306835466|ref|ZP_07468483.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Corynebacterium accolens ATCC 49726]
 gi|304568632|gb|EFM44180.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Corynebacterium accolens ATCC 49726]
          Length = 211

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + +A +I + + I++  RP  ++       +    P+     L +           
Sbjct: 23  VIQSVAVALVIALVIAIFVAQRPRGAAIANALTSIGLTLPSLALLGLAIPLFGIG----T 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +    L++F     IL N I G     +D  E A    ++       I LP  +P  +TG
Sbjct: 79  IPSVALVVFYAVLPILRNAIVGLHNVSDDVIESARGQGMSSTAILFRIRLPLAWPVIMTG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE------STEKGSFPEVV-LGVLIM 562
              +   +   + ++  A          GLG YI         T   +F  V  +GV+I+
Sbjct: 139 IRVSTQMSMGVAAIAAYALG-------PGLGGYIYSGLSQIGGTNALNFTLVGTIGVVII 191

Query: 563 CCFVLAL 569
              V A+
Sbjct: 192 ALIVDAI 198



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 19/210 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I      +   + +    ++ ++ ++L+   V A   A+  R   +   +  I  ++P L
Sbjct: 5   IAARWQDILFRSYQHASLVIQSVAVALVIALVIAIFVAQRPRGAAIANALTSIGLTLPSL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F            + ++  +    V  +  +    L N+  D+ E +R   
Sbjct: 65  ALLGLAIPLFGIG--------TIPSVALVVFYAVLPILRNAIVGLHNVSDDVIESARGQG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S     + + +P + P ++  + +S       V A     +G      PG+G YI   +
Sbjct: 117 MSSTAILFRIRLPLAWPVIMTGIRVSTQMS-MGVAAIAAYALG------PGLGGYIYSGL 169

Query: 234 KEQDLLAI----LYAMLTMLGVIFLYDQLL 259
            +          L   + ++ +  + D +L
Sbjct: 170 SQIGGTNALNFTLVGTIGVVIIALIVDAIL 199


>gi|71738175|ref|YP_272635.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257481891|ref|ZP_05635932.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289625081|ref|ZP_06458035.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650253|ref|ZP_06481596.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298485142|ref|ZP_07003238.1| Methionine ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|71558728|gb|AAZ37939.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298160394|gb|EFI01419.1| Methionine ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|330865658|gb|EGH00367.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330886111|gb|EGH20012.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330984791|gb|EGH82894.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009524|gb|EGH89580.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 214

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGAFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|78061348|ref|YP_371256.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77969233|gb|ABB10612.1| ABC proline/glycine betaine transporter, inner membrane subunit
           [Burkholderia sp. 383]
          Length = 392

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 75/195 (38%), Gaps = 9/195 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A R       ++  +L+         A+   +  V +P+L+I+Q+IP +      +    
Sbjct: 185 AIRHVSLAGGSVAAALIAGVPLGIACARIAAVRTVAMPVLNIVQTIPSIAMYGLMMAPLG 244

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  ++ 
Sbjct: 245 LLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLGQVPPHVTEAARAMGMTR 304

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q+   + +  ++P ++  + + +        VA+ +   G       GIG   A  +  
Sbjct: 305 AQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAADLVLL 364

Query: 236 QDLLAILYAMLTMLG 250
             +  I  A++  + 
Sbjct: 365 GAIPTIALALVAAVI 379



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W+  I    +    + A++I  +P+GI       + +   P   ++   P+   + L++
Sbjct: 181 FWIEAIRHVSLAGGSVAAALIAGVPLGIACARIAAVRTVAMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLGQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAE 545
            +T  +    + L    P  ++G           + + + +   G       G+G   A+
Sbjct: 301 GMTRAQRLLRVDLVLALPVILSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSAAD 360

Query: 546 STEKGSFPEVVLGVLIMCCF 565
               G+ P + L ++    F
Sbjct: 361 LVLLGAIPTIALALVAAVIF 380


>gi|50084403|ref|YP_045913.1| high-affinity phosphate ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49530379|emb|CAG68091.1| high-affinity phosphate transport protein (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
          Length = 465

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             L      +   ML  + IS+      A      AK   L  V+   ++ + ++P + F
Sbjct: 240 SGLAGAFMGSLFMMLIVIFISIPIGVASAIYLEEFAKQNILTDVIEVNINNLAAVPSIVF 299

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                  F+N      + A L     +    +  +  +   SL  +P  + + +     S
Sbjct: 300 GLLGAAIFINWMQLP-LSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGAS 358

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q  ++  +P ++PG++   ++ ++  
Sbjct: 359 KVQTVFHHVLPLALPGILTGAIIGVAQA 386



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 74/213 (34%), Gaps = 31/213 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           + +++I   I IP+G+              ++  I+     LAA P+ VF  L  +    
Sbjct: 250 LFMMLIVIFISIPIGVASAIYLEEFAKQNILTDVIEVNINNLAAVPSIVFGLLGAAIFIN 309

Query: 444 Y---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    L+  L   L++   T   ++    A   A P   ++ A     +  +   + +LP
Sbjct: 310 WMQLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASKVQTVFHHVLP 369

Query: 501 GIFPYYVTGAITACG--------------GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              P  +TGAI                   A+ ASI +                 ++ + 
Sbjct: 370 LALPGILTGAIIGVAQALGETAPLLLIGMSAFVASIPTSPLDQSTALPVQI----FLWQG 425

Query: 547 TEKGSF--PEVVLGVLIMCCFVLALNRF-LWHP 576
            E  +F        ++++   ++ LN   +W  
Sbjct: 426 NELRNFFEARTSAAIIVLLAMMIGLNSLAIWLR 458


>gi|284922114|emb|CBG35195.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 243

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAVLALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|282865702|ref|ZP_06274752.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282559346|gb|EFB64898.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 225

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L     +       +++I L+     A  A   R     ++ +  ++ +IP L   +  +
Sbjct: 27  LMDATVQHLQLTAVSVLIGLVIALPLALAARHRRWAAAPVLGVTTVLYTIPSLAMFSLLL 86

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             +       V G  L          +  +  ++   L ++P +  + +R       +  
Sbjct: 87  PVYGLSATLVVAGLVL--------YSLTLLVRNILAGLRSVPEETRQAARGLGYGPLRLL 138

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P  +  + ++       V A  ++ VG  ++   G+G+ I   +       
Sbjct: 139 LTVELPLALPAAMAGLRIA------TVSAVSLVTVG-AIVGFGGLGNLIYSGMNTYFKAQ 191

Query: 241 ILYAMLTMLGVIFLYD 256
           +L A +  + +    D
Sbjct: 192 VLTASVLCVVIAVAAD 207



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +    V ++I  +I +P+ +    R   ++ +     +L   P+   F L++        
Sbjct: 35  LQLTAVSVLIGLVIALPLALAARHRRWAAAPVLGVTTVLYTIPSLAMFSLLLPVYGLSAT 94

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +   ++  +   ++ N++AG  + P + ++ A        R    + LP   P  
Sbjct: 95  ----LVVAGLVLYSLTLLVRNILAGLRSVPEETRQAARGLGYGPLRLLLTVELPLALPAA 150

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G   A   A +   V  +  +G       GLG  I          +V+   ++     
Sbjct: 151 MAGLRIATVSAVSLVTVGAIVGFG-------GLGNLIYSGMNTYFKAQVLTASVLCVVIA 203

Query: 567 LALN 570
           +A +
Sbjct: 204 VAAD 207


>gi|222529154|ref|YP_002573036.1| phosphate ABC transporter inner membrane subunit PstC
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456001|gb|ACM60263.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 284

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ IF F     +       +               +  +   +++  +  III   I I
Sbjct: 25  LITIFIFKEGFAIIKEYGLWNFILGRKWAPLSGKFGIFPMILGSIYVTLGAIIIGVPIGI 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  I+PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVNEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLIRKFLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +  +
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKIPNS 228



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 65/157 (41%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFM 124
           T   ++  + I +        L   + ++  ++ P ++++  IP + +       VV  +
Sbjct: 72  TLGAIIIGVPIGIATAIFLGELV--NEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             + G    + LA+   +    +  +      S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKFLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  G++ ++++ M       +A  M+      IP
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|254228720|ref|ZP_04922143.1| phosphate ABC transporter, permease protein PstC [Vibrio sp. Ex25]
 gi|262396558|ref|YP_003288411.1| phosphate transport system permease protein PstC [Vibrio sp. Ex25]
 gi|151938667|gb|EDN57502.1| phosphate ABC transporter, permease protein PstC [Vibrio sp. Ex25]
 gi|262340152|gb|ACY53946.1| phosphate transport system permease protein PstC [Vibrio sp. Ex25]
          Length = 310

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      
Sbjct: 32  KERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVAT 90

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S    ++       L A        +RL  ++ P ++++  IP + +    L 
Sbjct: 91  MIVASIVSTAGAVIVGVPIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLV 150

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 151 IIVPLIQNIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKI 210

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 211 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 24/230 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV--------- 379
               ++   +R+ + L +    +       IA+  +   +  F    V  +         
Sbjct: 24  REKRRVDWKERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP 83

Query: 380 -IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV 432
            ++     +   +V    A I+ +P+G+             ++  I+P  +LLA  P+ V
Sbjct: 84  ALYGVATMIVASIVSTAGAVIVGVPIGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVV 143

Query: 433 F--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +         PL+ +  +    N  L   +++       ++        A P  +KE + 
Sbjct: 144 YGFFGLVIIVPLIQNIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSL 203

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 204 ALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 253


>gi|15610892|ref|NP_218273.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter PROZ
           [Mycobacterium tuberculosis H37Rv]
 gi|15843376|ref|NP_338413.1| amino acid ABC transporter, permease protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31794926|ref|NP_857419.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter PROZ
           [Mycobacterium bovis AF2122/97]
 gi|121639670|ref|YP_979894.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/l-proline) transport integral
           membrane protein ABC transporter proZ [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148663622|ref|YP_001285145.1| amino acid ABC transporter permease protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148824961|ref|YP_001289715.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis F11]
 gi|167970917|ref|ZP_02553194.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis H37Ra]
 gi|215405811|ref|ZP_03417992.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis 02_1987]
 gi|215413684|ref|ZP_03422352.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215448100|ref|ZP_03434852.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis T85]
 gi|218755539|ref|ZP_03534335.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis GM 1503]
 gi|219559840|ref|ZP_03538916.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis T17]
 gi|224992166|ref|YP_002646855.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/L-proline) transport integral
           membrane protein ABC transporter [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253800803|ref|YP_003033804.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 1435]
 gi|254233248|ref|ZP_04926574.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis C]
 gi|254366301|ref|ZP_04982345.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552870|ref|ZP_05143317.1| osmoprotectant proZ [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184679|ref|ZP_05762153.1| osmoprotectant proZ [Mycobacterium tuberculosis CPHL_A]
 gi|260198804|ref|ZP_05766295.1| osmoprotectant proZ [Mycobacterium tuberculosis T46]
 gi|260202959|ref|ZP_05770450.1| osmoprotectant proZ [Mycobacterium tuberculosis K85]
 gi|289441192|ref|ZP_06430936.1| osmoprotectant proZ [Mycobacterium tuberculosis T46]
 gi|289445355|ref|ZP_06435099.1| osmoprotectant proZ [Mycobacterium tuberculosis CPHL_A]
 gi|289556021|ref|ZP_06445231.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 605]
 gi|289572002|ref|ZP_06452229.1| osmoprotectant proZ [Mycobacterium tuberculosis T17]
 gi|289572406|ref|ZP_06452633.1| osmoprotectant proZ [Mycobacterium tuberculosis K85]
 gi|289747596|ref|ZP_06506974.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis 02_1987]
 gi|289748275|ref|ZP_06507653.1| osmoprotectant proZ [Mycobacterium tuberculosis T92]
 gi|289755887|ref|ZP_06515265.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis EAS054]
 gi|289759918|ref|ZP_06519296.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis T85]
 gi|289763938|ref|ZP_06523316.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis GM 1503]
 gi|294995332|ref|ZP_06801023.1| osmoprotectant proZ [Mycobacterium tuberculosis 210]
 gi|297636437|ref|ZP_06954217.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 4207]
 gi|297733431|ref|ZP_06962549.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN R506]
 gi|298527229|ref|ZP_07014638.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306791356|ref|ZP_07429658.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu005]
 gi|306795421|ref|ZP_07433723.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu006]
 gi|307086554|ref|ZP_07495667.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu012]
 gi|313660762|ref|ZP_07817642.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN V2475]
 gi|2960180|emb|CAA18078.1| POSSIBLE OSMOPROTECTANT (GLYCINE
           BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT INTEGRAL
           MEMBRANE PROTEIN ABC TRANSPORTER PROZ [Mycobacterium
           tuberculosis H37Rv]
 gi|13883741|gb|AAK48227.1| amino acid ABC transporter, permease protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31620524|emb|CAD95968.1| POSSIBLE OSMOPROTECTANT (GLYCINE
           BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT INTEGRAL
           MEMBRANE PROTEIN ABC TRANSPORTER PROZ [Mycobacterium
           bovis AF2122/97]
 gi|121495318|emb|CAL73805.1| Possible osmoprotectant (glycine
           betaine/carnitine/choline/l-proline) transport integral
           membrane protein ABC transporter proZ [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|124603041|gb|EAY61316.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis C]
 gi|134151813|gb|EBA43858.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507774|gb|ABQ75583.1| amino acid ABC transporter permease protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148723488|gb|ABR08113.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proZ [Mycobacterium
           tuberculosis F11]
 gi|224775281|dbj|BAH28087.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/L-proline) transport integral
           membrane protein ABC transporter [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253322306|gb|ACT26909.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 1435]
 gi|289414111|gb|EFD11351.1| osmoprotectant proZ [Mycobacterium tuberculosis T46]
 gi|289418313|gb|EFD15514.1| osmoprotectant proZ [Mycobacterium tuberculosis CPHL_A]
 gi|289440653|gb|EFD23146.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 605]
 gi|289536837|gb|EFD41415.1| osmoprotectant proZ [Mycobacterium tuberculosis K85]
 gi|289545756|gb|EFD49404.1| osmoprotectant proZ [Mycobacterium tuberculosis T17]
 gi|289688124|gb|EFD55612.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis 02_1987]
 gi|289688862|gb|EFD56291.1| osmoprotectant proZ [Mycobacterium tuberculosis T92]
 gi|289696474|gb|EFD63903.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis EAS054]
 gi|289711444|gb|EFD75460.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis GM 1503]
 gi|289715482|gb|EFD79494.1| osmoprotectant transport system permease proZ [Mycobacterium
           tuberculosis T85]
 gi|298497023|gb|EFI32317.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proZ
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308340109|gb|EFP28960.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu005]
 gi|308344097|gb|EFP32948.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu006]
 gi|308364031|gb|EFP52882.1| osmoprotectant proZ [Mycobacterium tuberculosis SUMu012]
 gi|323717621|gb|EGB26823.1| osmoprotectant proZ [Mycobacterium tuberculosis CDC1551A]
 gi|326905594|gb|EGE52527.1| osmoprotectant proZ [Mycobacterium tuberculosis W-148]
 gi|328460530|gb|AEB05953.1| osmoprotectant proZ [Mycobacterium tuberculosis KZN 4207]
          Length = 239

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ Y++    +   + +    C  +    V +  +++I +PVG+ IG     +  +   
Sbjct: 6   QALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGA 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V         P + L LL I      +L +  AG ++      +
Sbjct: 66  VNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPS----LLASTYAGIASVDPLVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P  + G  +A       ++     +    +    GLG 
Sbjct: 122 AARAMGMTESQVLLRVEVPNALPLMLGGLRSA-------TLQVVATATVAAYASLGGLGG 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +  ++  F   ++G +++    L L+  L
Sbjct: 175 YLIDGIKERRFHIALVGAMMVAALALTLDGLL 206



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L             A+  S L       L   + R  +++V  ++ ++++P      
Sbjct: 20  PVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNGLRALP------ 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L            + A+    + ++  S Y  + ++   + + +R+  ++  
Sbjct: 74  --TLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMTES 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + VP ++P ++  +           +             L G+G Y+   IKE+ 
Sbjct: 132 QVLLRVEVPNALPLMLGGLR-------SATLQVVATATVAAYASLGGLGGYLIDGIKERR 184

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               L   + +  +    D LL
Sbjct: 185 FHIALVGAMMVAALALTLDGLL 206


>gi|313835542|gb|EFS73256.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314928583|gb|EFS92414.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314970368|gb|EFT14466.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328908198|gb|EGG27957.1| ABC transporter, permease protein [Propionibacterium sp. P08]
          Length = 215

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 86/217 (39%), Gaps = 15/217 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++ +   + Q AS   +  ++ ++ SLL +      A +S+    +LVP   I+      
Sbjct: 6   VSENWDQIWQLASHHAVLGVTPVMTSLLLSVPLGWWAYRSQTARRILVPGTSIL-----Y 60

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
              +  +   + L  G  I   +  I A+    +  +  +   +  ++ R +   + +  
Sbjct: 61  ALPSLPLFVLLPLVLGTKILDPINVIVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIG 120

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +     
Sbjct: 121 HSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFTDGY 173

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
           +      I   ++  L +  ++D ++    R +  W 
Sbjct: 174 QRSFPTEIWVGIIGTLVLAVIFDLIIVCVGRLLTPWQ 210



 Score = 38.8 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 62/183 (33%), Gaps = 8/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  ++ + ++ +P+G W          + P   +L A P+   F L+   +    L+P  
Sbjct: 25  VTPVMTSLLLSVPLGWWAYRSQTARRILVPGTSILYALPSLPLFVLLPLVLGTKILDPIN 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L ++G    +         +     +  A +   +  + +  + LP   P  V G 
Sbjct: 85  VIVALTLYGIALLVRTAT-DAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGM 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   +   V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 144 RVVSASTLSLVSVGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAVIFD 196

Query: 571 RFL 573
             +
Sbjct: 197 LII 199


>gi|254384402|ref|ZP_04999744.1| ABC transporter permease [Streptomyces sp. Mg1]
 gi|194343289|gb|EDX24255.1| ABC transporter permease [Streptomyces sp. Mg1]
          Length = 334

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 7/223 (3%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+ +G  ++    I    TY D  +V W    T+  V      A+++ +  G  +    
Sbjct: 95  FGLWLGKDFRLWDNISRTLTYDDGAFVRW-TLNTLLYVAAGAGGATLLAVLGGYALAVYE 153

Query: 413 H-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 +        A P            S   L    W  ++    + + +    +  
Sbjct: 154 FPGRRAVFAVVIGAVAVPGTALAVPTFLMFSGMGLANTPWAVIIPSLVSPFGLYLMWVFT 213

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWG 530
           A A P +  E A        R +  I LP + P  VT  + +    W N  +   +    
Sbjct: 214 AEAVPAELLEAARIDGAGELRVFFRIALPLLMPGTVTVLLFSMVATWNNYFLPLIMIKDP 273

Query: 531 HIHLRTTGLGAYIAESTEKGSFP----EVVLGVLIMCCFVLAL 569
             +  T GL A+ A++   G  P     +   +L +   V+  
Sbjct: 274 DWYPLTLGLNAWSAQARTAGGEPVFDLIITGSLLTIAPTVVLF 316



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 5/150 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGF 115
           D  +  ++   T L + +    + L   +     A         +  ++    ++P    
Sbjct: 116 DDGAFVRWTLNTLLYVAAGAGGATLLAVLGGYALAVYEFPGRRAVFAVVIGAVAVPGTAL 175

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              T + F     G  +     A+        + +      +   +P +L E +R     
Sbjct: 176 AVPTFLMFS----GMGLANTPWAVIIPSLVSPFGLYLMWVFTAEAVPAELLEAARIDGAG 231

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
             + F+ + +P  MPG V  ++ SM   W 
Sbjct: 232 ELRVFFRIALPLLMPGTVTVLLFSMVATWN 261


>gi|148925971|ref|ZP_01809658.1| putative phosphate transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844957|gb|EDK22061.1| putative phosphate transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 362

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 146 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 205

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 206 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 264

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++  
Sbjct: 265 LPLAMPMILTGSILTLAQA 283



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 140 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 199

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 200 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 259

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I     A
Sbjct: 260 VKGIMLPLAMPMILTGSILTLAQA 283


>gi|116748150|ref|YP_844837.1| phosphate ABC transporter inner membrane subunit PstC
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697214|gb|ABK16402.1| phosphate ABC transporter, inner membrane subunit PstC
           [Syntrophobacter fumaroxidans MPOB]
          Length = 303

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 10/171 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--IL 113
                   L        +++         A              L P+++++  IP  +L
Sbjct: 68  LYGTLPLILGSAMVTFAAIVMALPLGVATAVFVREVAPDWAREFLKPLIEVLAGIPSVVL 127

Query: 114 GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRS 171
           GF    ++   +    G   G  +     I          S+   SL  +P+   + + +
Sbjct: 128 GFFGMHIIAPLVREVLGAPTGLTVFTGALILAYMALPTIISVAEDSLDAVPKSYRDAALA 187

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
              + WQ  W + VP +  G+V  +M+ M       +A  M+      +PL
Sbjct: 188 MGATRWQTIWRVVVPAARSGIVTAVMLGMGRAIGETMAVMMVTGNAARMPL 238



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPL 436
            ++   A ++ +P+G+                 ++P  ++LA  P+ V          PL
Sbjct: 79  AMVTFAAIVMALPLGVATAVFVREVAPDWAREFLKPLIEVLAGIPSVVLGFFGMHIIAPL 138

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V   +           +L++ +     I+        A P  +++ A +   T W+    
Sbjct: 139 VREVLGAPTGLTVFTGALILAYMALPTIISVAEDSLDAVPKSYRDAALAMGATRWQTIWR 198

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +++P      VT  +   G A   ++   + +     +  +
Sbjct: 199 VVVPAARSGIVTAVMLGMGRAIGETMAVMMVTGNAARMPLS 239


>gi|332885674|gb|EGK05920.1| hypothetical protein HMPREF9456_02184 [Dysgonomonas mossii DSM
           22836]
          Length = 217

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 14/203 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T +  L +   S L           +R+        L  +L  +++I ++IP 
Sbjct: 9   LLKGTGETIVMTLVSGFFSFLLGLPLGVWLYITRKGQIKENLLLHNILSTVVNIFRAIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG  LAA+  +       +   +  SL ++P  L E SRS 
Sbjct: 68  FIILIVWMIPFTRALVGTSIGV-LAALVPLSIGAAPFVARMIENSLIDVPGGLIEASRSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + +Q    + +P ++P +V  + +++      +V    +        L  IG      
Sbjct: 127 GATPFQIVKRVLLPEALPSIVNCVSITL----IMLVGYSAMGGAVGAGGLGQIGYQYGYV 182

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
               +++ I+ A+L +L  I  Y
Sbjct: 183 GYNLEIMNIVLALLVILVFIIQY 205



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 16/200 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA 430
           ++     T+   +V    + ++ +P+G+W        I     + + +     +  A P 
Sbjct: 9   LLKGTGETIVMTLVSGFFSFLLGLPLGVWLYITRKGQIKENLLLHNILSTVVNIFRAIPF 68

Query: 431 N---VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
               V+       +    +     L  L I G   ++   +       P    E + S  
Sbjct: 69  IILIVWMIPFTRALVGTSIGVLAALVPLSI-GAAPFVARMIENSLIDVPGGLIEASRSMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            T ++  + ++LP   P  V              +                +G       
Sbjct: 128 ATPFQIVKRVLLPEALPSIVNCVSITL----IMLVGYSAMGGAVGAGGLGQIGYQYGYVG 183

Query: 548 EKGSFPEVVLGVLIMCCFVL 567
                  +VL +L++  F++
Sbjct: 184 YNLEIMNIVLALLVILVFII 203


>gi|307320809|ref|ZP_07600219.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306893519|gb|EFN24295.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 222

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGF-LTFT 119
             Y   + +  +++ VI+L          A+ R +    +     + +++P +   L   
Sbjct: 13  WDYFRNSLIVSVTSTVIALAIGLAGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLF 72

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++Y             L  +       +W +          +P+DL E ++    + WQ 
Sbjct: 73  MLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTPWQA 128

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  I        LP +G     A    D  
Sbjct: 129 FWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLP-VGLLDYTAEFTIDWR 187

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 188 GMCALAVVMIVPALTLTFIIQKHLV 212



 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 3/165 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++   V   +IA  I +  G           S I     L  A P       +    +  
Sbjct: 19  SLIVSVTSTVIALAIGLAGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFMLYART 78

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    +  +L            +I G     P D  E A     T W+ +  +  P   
Sbjct: 79  GIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEFPLAG 138

Query: 504 PYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAEST 547
           P   +  I A   +WN  ++ S++    +      GL  Y AE T
Sbjct: 139 PGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFT 183


>gi|144575145|gb|AAZ43918.2| spermidine/putrescine ABC transporter permease protein PotB
           [Mycoplasma synoviae 53]
          Length = 283

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 16/204 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY--- 122
            R+      A +I L    +YA   +KS+     +  +  I   I  L   T   +Y   
Sbjct: 68  LRSLKLGFIASIICLFIGIIYAYWVSKSKNKFFKIYALTLI---ISPLAIFTIARIYSIK 124

Query: 123 --FMNLYPG--KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             F+ L+ G  K + +E   +  +    +  M   +Y    ++P++  E S     S ++
Sbjct: 125 GLFLALFAGDPKSLNSEWFIVVGLVYLNLPLMIMPLYSVFKDMPKNTVEASNDLGYSNFK 184

Query: 179 KFWYLGVPFSMPGLVWNM-MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            F+ + +P++   ++  + M+ ++    FVVA +++  G        IG  I   I   +
Sbjct: 185 TFFKVIIPYATKAILSGIAMIFLASATTFVVARKLLPDGSQNQL---IGELINEKINPGN 241

Query: 238 LLAI--LYAMLTMLGVIFLYDQLL 259
              +    A++ ++  IF+   LL
Sbjct: 242 PFDLSSGSALVIVVSAIFIGTYLL 265


>gi|153827103|ref|ZP_01979770.1| phosphate ABC transporter, permease protein PstC [Vibrio cholerae
           MZO-2]
 gi|229510450|ref|ZP_04399930.1| phosphate transport system permease protein PstC [Vibrio cholerae
           B33]
 gi|229514579|ref|ZP_04404040.1| phosphate transport system permease protein PstC [Vibrio cholerae
           TMA 21]
 gi|229517419|ref|ZP_04406864.1| phosphate transport system permease protein PstC [Vibrio cholerae
           RC9]
 gi|229522739|ref|ZP_04412155.1| phosphate transport system permease protein PstC [Vibrio cholerae
           TM 11079-80]
 gi|229527943|ref|ZP_04417334.1| phosphate transport system permease protein PstC [Vibrio cholerae
           12129(1)]
 gi|229605229|ref|YP_002875933.1| phosphate transport system permease protein PstC [Vibrio cholerae
           MJ-1236]
 gi|254850335|ref|ZP_05239685.1| phosphate ABC transporter [Vibrio cholerae MO10]
 gi|255746104|ref|ZP_05420051.1| phosphate transport system permease protein PstC [Vibrio cholera
           CIRS 101]
 gi|262162058|ref|ZP_06031073.1| phosphate transport system permease protein PstC [Vibrio cholerae
           INDRE 91/1]
 gi|149739008|gb|EDM53316.1| phosphate ABC transporter, permease protein PstC [Vibrio cholerae
           MZO-2]
 gi|229334305|gb|EEN99790.1| phosphate transport system permease protein PstC [Vibrio cholerae
           12129(1)]
 gi|229340724|gb|EEO05730.1| phosphate transport system permease protein PstC [Vibrio cholerae
           TM 11079-80]
 gi|229345455|gb|EEO10428.1| phosphate transport system permease protein PstC [Vibrio cholerae
           RC9]
 gi|229348559|gb|EEO13517.1| phosphate transport system permease protein PstC [Vibrio cholerae
           TMA 21]
 gi|229352895|gb|EEO17835.1| phosphate transport system permease protein PstC [Vibrio cholerae
           B33]
 gi|229371715|gb|ACQ62137.1| phosphate transport system permease protein PstC [Vibrio cholerae
           MJ-1236]
 gi|254846040|gb|EET24454.1| phosphate ABC transporter [Vibrio cholerae MO10]
 gi|255735858|gb|EET91256.1| phosphate transport system permease protein PstC [Vibrio cholera
           CIRS 101]
 gi|262028133|gb|EEY46791.1| phosphate transport system permease protein PstC [Vibrio cholerae
           INDRE 91/1]
 gi|327485302|gb|AEA79708.1| Phosphate transport system permease protein PstC [Vibrio cholerae
           LMA3894-4]
          Length = 306

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 28  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALYGVATM 87

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 88  IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 148 IVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 208 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|15926968|ref|NP_374501.1| hypothetical protein SA1220 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267876|ref|YP_001246819.1| phosphate ABC transporter, inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150393940|ref|YP_001316615.1| phosphate ABC transporter inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257795557|ref|ZP_05644536.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9781]
 gi|258413365|ref|ZP_05681641.1| ABC phosphate transporter [Staphylococcus aureus A9763]
 gi|258420528|ref|ZP_05683470.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9719]
 gi|258434700|ref|ZP_05688774.1| phosphate ABC transporter [Staphylococcus aureus A9299]
 gi|258444724|ref|ZP_05693053.1| phosphate ABC transporter [Staphylococcus aureus A8115]
 gi|258447441|ref|ZP_05695585.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A6300]
 gi|258449282|ref|ZP_05697385.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A6224]
 gi|258454662|ref|ZP_05702626.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A5937]
 gi|269203010|ref|YP_003282279.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282892880|ref|ZP_06301115.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A8117]
 gi|282928948|ref|ZP_06336537.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A10102]
 gi|295406333|ref|ZP_06816140.1| phosphate ABC transporter [Staphylococcus aureus A8819]
 gi|296276662|ref|ZP_06859169.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297244562|ref|ZP_06928445.1| phosphate ABC transporter [Staphylococcus aureus A8796]
 gi|13701185|dbj|BAB42480.1| SA1220 [Staphylococcus aureus subsp. aureus N315]
 gi|147740945|gb|ABQ49243.1| phosphate ABC transporter, inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946392|gb|ABR52328.1| phosphate ABC transporter, inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257789529|gb|EEV27869.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9781]
 gi|257839929|gb|EEV64397.1| ABC phosphate transporter [Staphylococcus aureus A9763]
 gi|257843476|gb|EEV67883.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9719]
 gi|257849061|gb|EEV73043.1| phosphate ABC transporter [Staphylococcus aureus A9299]
 gi|257850217|gb|EEV74170.1| phosphate ABC transporter [Staphylococcus aureus A8115]
 gi|257853632|gb|EEV76591.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A6300]
 gi|257857270|gb|EEV80168.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A6224]
 gi|257863045|gb|EEV85809.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A5937]
 gi|262075300|gb|ACY11273.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282589457|gb|EFB94547.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A10102]
 gi|282764877|gb|EFC05002.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A8117]
 gi|285817066|gb|ADC37553.1| Phosphate transport system permease protein pstC [Staphylococcus
           aureus 04-02981]
 gi|294968921|gb|EFG44943.1| phosphate ABC transporter [Staphylococcus aureus A8819]
 gi|297178592|gb|EFH37838.1| phosphate ABC transporter [Staphylococcus aureus A8796]
 gi|312829783|emb|CBX34625.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315131194|gb|EFT87178.1| phosphate ABC transporter, inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727383|gb|EGG63839.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus 21172]
          Length = 308

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 81/238 (34%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +S       +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRSFISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|283956028|ref|ZP_06373517.1| putative phosphate ABC transporter, permease protein PstA
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792504|gb|EFC31284.1| putative phosphate ABC transporter, permease protein PstA
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 342

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A        +   ++ + SIP + F    +  F+
Sbjct: 126 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNLFTHFIEVCINNLASIPSILFGLLGLGVFI 185

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 186 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 244

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 245 LPLAMPMILTGSILTLAGA 263



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+               +  I+     LA+ P+ +F  L
Sbjct: 120 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNLFTHFIEVCINNLASIPSILFGLL 179

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 180 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 239

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I    GA
Sbjct: 240 VKGIMLPLAMPMILTGSILTLAGA 263


>gi|260426144|ref|ZP_05780123.1| phosphate ABC transporter, permease protein PstA [Citreicella sp.
           SE45]
 gi|260420636|gb|EEX13887.1| phosphate ABC transporter, permease protein PstA [Citreicella sp.
           SE45]
          Length = 450

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 53/150 (35%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  + ++L      +      A   +    +   +  + ++P +
Sbjct: 219 EQAGLGVSMLGSFFMMLVVLFLALPIGVAASIYLEEFASQNKFTDFIEVNISNLAAVPSI 278

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+  +      A +     +    +  +  S   SL  +P  + + +    
Sbjct: 279 VFGILGLAAFIQ-FAHLPQSAPIVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVG 337

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 338 ASKMQAVFHHVLPLAMPGILTGTIIGLAQA 367



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M     ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVSMLGSFFMMLVVLFLALPIGVAASIYLEEFASQNKFTDFIEVNISNLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P        L++   T   I+ +  A   A P   ++ A     +  + 
Sbjct: 284 GLAAFIQFAHLPQSAPIVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 VFHHVLPLAMPGILTGTIIGLAQA 367


>gi|310657353|ref|YP_003935074.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308824131|emb|CBH20169.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Clostridium sticklandii]
          Length = 240

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 69/175 (39%), Gaps = 10/175 (5%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           ++ II ++L  +    V      IV   +    + +        +  + V+S+       
Sbjct: 13  LMTIIVVILAMLSYYVVNYPQDKIVERFISYERILRATKEHIYIVAISSVLSIFTAVPLG 72

Query: 88  TLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            L  ++  ++    ++ +++I Q+IP L  +   V  F              AI A++  
Sbjct: 73  ILITRTNFKKFANKVLGVVNIGQTIPSLAIVALFVGVFGIG--------AKTAILALWIY 124

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +  +  +    + N+   + E +R   ++ ++    + +P +MP ++  +  ++
Sbjct: 125 SLLPILRNTMVGILNLDESVLEAARGMGMTQFRILNKIELPLAMPIILAGIRTAI 179



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 6/143 (4%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++ V +  +++    +P+GI I        ++K+     +    P+     L V      
Sbjct: 54  IYIVAISSVLSIFTAVPLGILITRTNFKKFANKVLGVVNIGQTIPSLAIVALFVGVFGIG 113

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L L +  +      IL N + G         E A    +T +R    I LP   P
Sbjct: 114 AKTAILALWIYSLL----PILRNTMVGILNLDESVLEAARGMGMTQFRILNKIELPLAMP 169

Query: 505 YYVTGAITACGGAWNASIVSEVA 527
             + G  TA       ++++   
Sbjct: 170 IILAGIRTAITINIGTAVLAAFV 192


>gi|294501361|ref|YP_003565061.1| phosphate ABC transporter permease PstC [Bacillus megaterium QM
           B1551]
 gi|295706708|ref|YP_003599783.1| phosphate ABC transporter permease PstC [Bacillus megaterium DSM
           319]
 gi|294351298|gb|ADE71627.1| phosphate ABC transporter, permease protein PstC [Bacillus
           megaterium QM B1551]
 gi|294804367|gb|ADF41433.1| phosphate ABC transporter, permease protein PstC [Bacillus
           megaterium DSM 319]
          Length = 295

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 80/215 (37%), Gaps = 15/215 (6%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATL--AAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           +   + L  + A++IS       A        +    VL P+L+++  +P + +    V 
Sbjct: 74  FILGSMLVSIGAVIISAPIGIAIAIFNNYISPKFGSTVLRPVLELLVGVPSVVYGLLGVT 133

Query: 122 YFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + L      G     +A I  +    +  +      ++ ++  +  E S     + WQ
Sbjct: 134 ILVPLLRDNFGGVGFSLIAGIIVLSVMILPTIASIADDAIRSVAPEYLEASYGLGSTRWQ 193

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT---------VIPLPGIGSY- 228
               + +P +  G++  +++ ++  +   +A +M++                L GI +  
Sbjct: 194 AISRVIIPSAKTGILTGIVLGLARAFGEALAVQMVIGNTVKLPESLYSPTATLTGILTMD 253

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           ++  +        L+ +  +L +I     L+ R +
Sbjct: 254 MSNTLNGTAWNNALWTLAMILLLISFVFILIIRAI 288



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 86/231 (37%), Gaps = 18/231 (7%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
           ++IG    S  +  N+  Y  +++++    +++  V++   I   I I            
Sbjct: 51  ISIGEMLTSTKWSPNNKEYGALVFILGSMLVSIGAVIISAPIGIAIAIFNNYI--SPKFG 108

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV 468
           S+ ++P  +LL   P+ V+  L V+ +       +  +  +L   ++++       + ++
Sbjct: 109 STVLRPVLELLVGVPSVVYGLLGVTILVPLLRDNFGGVGFSLIAGIIVLSVMILPTIASI 168

Query: 469 IA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                 +   ++ E +     T W+    +I+P      +TG +     A+  ++  ++ 
Sbjct: 169 ADDAIRSVAPEYLEASYGLGSTRWQAISRVIIPSAKTGILTGIVLGLARAFGEALAVQMV 228

Query: 528 SWGHI---------HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               +             TG+      +T  G+     L  L M   +++ 
Sbjct: 229 IGNTVKLPESLYSPTATLTGILTMDMSNTLNGTAWNNALWTLAMILLLISF 279


>gi|256380259|ref|YP_003103919.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
           43827]
 gi|255924562|gb|ACU40073.1| binding-protein-dependent transport systems inner membrane
           component [Actinosynnema mirum DSM 43827]
          Length = 243

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 57/142 (40%), Gaps = 8/142 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             S+P       L  L+A++ +             + R G VLV   + ++++P      
Sbjct: 19  PTSIPTRVGVHLLYCLAAVLGASAIAVPLGLWIGHTGRGGTVLVAGGNALRALP------ 72

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L    + G +   + A+    +  +    Y  + ++ R + + +R   ++G 
Sbjct: 73  --TLGLVTLLYLLLGGGQAGVVIALIVLAIPPLLAGAYAGVQDVDRGVVDAARGMGMTGS 130

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q  W + +P ++P L+  +  +
Sbjct: 131 QVLWRVELPNALPLLLGGVRNA 152



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 54/151 (35%), Gaps = 4/151 (2%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           ++ ++++   +     +     + +   +  ++ AS I +P+G+WIG      + +    
Sbjct: 6   ALEWLLSPANWSGPTSIPTRVGVHLLYCLAAVLGASAIAVPLGLWIGHTGRGGTVLVAGG 65

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
             L A P       +V+ +          + + +I      +L    AG         + 
Sbjct: 66  NALRALPTLG----LVTLLYLLLGGGQAGVVIALIVLAIPPLLAGAYAGVQDVDRGVVDA 121

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           A    +TG +    + LP   P  + G   A
Sbjct: 122 ARGMGMTGSQVLWRVELPNALPLLLGGVRNA 152


>gi|78184664|ref|YP_377099.1| phosphate ABC transporter permease [Synechococcus sp. CC9902]
 gi|78168958|gb|ABB26055.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           CC9902]
          Length = 329

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 97/278 (34%), Gaps = 37/278 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++++ I+ ++  G   + +      ++    +       A       L   ++SL  
Sbjct: 48  VVALILVAILIVVFQGGLPSMLRYGWEFLITSNWNPVDDEYGAGAAIYGTLVTSILSLFI 107

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTV------------ 120
                   A          +L   +  +++++ +IP +    +  F +            
Sbjct: 108 AVPLGIGTAIFITENIIPEKLRNFIGLMVELLAAIPSVVLGLWAIFVMEPFIRPGLELLY 167

Query: 121 ---VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
               +F       +    L A+  +    +  +T     SL  +P+ L + +     + W
Sbjct: 168 NYFGWFPLFSSSPMGPGTLPAVLILVVMILPIITAITRDSLQQVPQQLTQAAYGIGTTRW 227

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
                + +P ++ G+V  +M+++       +A  MI+            PG  I + +A 
Sbjct: 228 GAIINVTLPAAISGIVGGVMLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAMLAN 287

Query: 232 AIKEQD------LLAILYAMLTMLGVIFLYDQLLFRPM 263
              E D      L+   + ++ M   + ++ QLL + +
Sbjct: 288 QFGEADGSQVSSLMYAAFVLIIMTLAVNIFAQLLVKRL 325



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 94/315 (29%), Gaps = 46/315 (14%)

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
           G  S    SP+ N  +   R             L L     V+ +L      V  G    
Sbjct: 8   GVISRRMSSPMDNRYRLRKRPQSEKLVDSGFKTLALSLASVVALILVAILIVVFQGGLPS 67

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------- 411
           +      +++   +  + +   +     ++  +V  I++  I +P+GI            
Sbjct: 68  MLRYGWEFLIT--SNWNPVDDEYGAGAAIYGTLVTSILSLFIAVPLGIGTAIFITENIIP 125

Query: 412 PHISSKIQPFAQLLAAFPANV-------------------------FFPLVVSCVSYYHL 446
             + + I    +LLAA P+ V                         +FPL  S       
Sbjct: 126 EKLRNFIGLMVELLAAIPSVVLGLWAIFVMEPFIRPGLELLYNYFGWFPLFSSSPMGPGT 185

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P + + ++MI      I           P    + A     T W     + LP      
Sbjct: 186 LPAVLILVVMILPIITAI---TRDSLQQVPQQLTQAAYGIGTTRWGAIINVTLPAAISGI 242

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYIAE-------STEKGSFPEVVL 557
           V G + A G A   ++   +      +   + L  G  I+          +      ++ 
Sbjct: 243 VGGVMLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAMLANQFGEADGSQVSSLMY 302

Query: 558 GVLIMCCFVLALNRF 572
              ++    LA+N F
Sbjct: 303 AAFVLIIMTLAVNIF 317


>gi|332709494|ref|ZP_08429455.1| phosphate ABC transporter, PhoT family TC 3.A.1.7.1, membrane
           protein 2 [Lyngbya majuscula 3L]
 gi|332351753|gb|EGJ31332.1| phosphate ABC transporter, PhoT family TC 3.A.1.7.1, membrane
           protein 2 [Lyngbya majuscula 3L]
          Length = 312

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 67/204 (32%), Gaps = 18/204 (8%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVA------IGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           +  +     R   +  I WF  +   A        + W    ++   F   D       G
Sbjct: 29  HRHRSKIAYRDRVLSIIVWFVALSVAASLAIILGHLVWYGSSHLSWEFLTTDPENAGREG 88

Query: 384 CITMFRVVVLIIIASIIWI--PVGI--------WIGFRPHISSKIQPFAQLLAAFPANVF 433
            I    V   +I+   + +  P+G+        +       S  ++    +LA  P+ VF
Sbjct: 89  GIASILVSTALILGVCLAVALPLGLGTAILLAEFTATNNLFSRLVRRSLDMLAGVPSIVF 148

Query: 434 FPLVVSCV-SYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGW 491
                +       L  ++    L +      IL   I  G  A P +++  A+S  I+  
Sbjct: 149 GLFGNAFFCVTLGLGFSILSGGLTLACMVLPILIRSIEEGLRAVPEEYRLGAASLGISRT 208

Query: 492 RWWRYIILPGIFPYYVTGAITACG 515
                ++LP   P  V G I   G
Sbjct: 209 STLTNLLLPAAVPSLVAGLILGIG 232



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 52/130 (40%), Gaps = 2/130 (1%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +  A+ + L    + A   A +     ++   LD++  +P + F  F   +F       +
Sbjct: 105 LAVALPLGLGTAILLAEFTATNNLFSRLVRRSLDMLAGVPSIVFGLFGNAFFCVTL--GL 162

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + L+    +    +  +  S+ + L  +P +    + S  +S       L +P ++P 
Sbjct: 163 GFSILSGGLTLACMVLPILIRSIEEGLRAVPEEYRLGAASLGISRTSTLTNLLLPAAVPS 222

Query: 192 LVWNMMMSMS 201
           LV  +++ + 
Sbjct: 223 LVAGLILGIG 232


>gi|327439709|dbj|BAK16074.1| ABC-type phosphate transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 274

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            +  +VISLL       LAA       K  RL  ++    + +  IP + +  F  V+F+
Sbjct: 63  TILTIVISLLIATPIGILAAVYLHEYAKQGRLVRIIRYATESLTGIPSIIYGLFGAVFFV 122

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +   K+  + +AA   +    +  +  +  ++L  +P    E S +   +  Q    + 
Sbjct: 123 VIL--KLGMSIIAASLTLTIIVLPVIIRTTEEALKTVPATYREGSLALGTTKLQTLIKVI 180

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +MPG++  +++S+ 
Sbjct: 181 LPSAMPGILSGIILSIG 197



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF-RVVVLIII 396
           + + +   +    V+  +   I ++   YI   F + D       G   M    ++ I+I
Sbjct: 10  RGLLWGSALISVAVLVVIVGYIFYKGFSYISFDFIFGDYSPTGGGGIFPMIVTTILTIVI 69

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPANVFFPL-VVSCVSYYHLNP 448
           + +I  P+GI      H  +K     +++          P+ ++     V  V    L  
Sbjct: 70  SLLIATPIGILAAVYLHEYAKQGRLVRIIRYATESLTGIPSIIYGLFGAVFFVVILKLGM 129

Query: 449 NLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++  + L +      ++           P  ++E + +   T  +    +ILP   P  +
Sbjct: 130 SIIAASLTLTIIVLPVIIRTTEEALKTVPATYREGSLALGTTKLQTLIKVILPSAMPGIL 189

Query: 508 TGAITACG 515
           +G I + G
Sbjct: 190 SGIILSIG 197


>gi|167648504|ref|YP_001686167.1| phosphate ABC transporter inner membrane subunit PstA [Caulobacter
           sp. K31]
 gi|167350934|gb|ABZ73669.1| phosphate ABC transporter, inner membrane subunit PstA [Caulobacter
           sp. K31]
          Length = 433

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 26/202 (12%)

Query: 75  AMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            ++I+         +AA        K+R    V+   ++ + ++P + +    +  F+N 
Sbjct: 221 MLIITATIAIPVGVMAAVYLEEFAPKNRW-TDVIEVNINNLAAVPSIVYGLLGLALFINW 279

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                 G+ L     +    +  +  +   SL  +P  + E +     S  Q  ++  +P
Sbjct: 280 L-HVPRGSPLVGGLVMALMALPTVIIATRSSLKAVPPSIREAALGVGASKAQTVFHHVLP 338

Query: 187 FSMPGLVWNMMMSMSGGW-------------FFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +MPG++   ++S++                F   A E      TV+P+     +I    
Sbjct: 339 LAMPGVMTGAILSLAHALGETAPLLMIGMVAFVPGAPESFTSSATVLPVQ---VFIWENA 395

Query: 234 KEQDLLAILYAMLTMLGVIFLY 255
            E+       A + +L V  + 
Sbjct: 396 SERAFHERTAAAIIVLLVFMIV 417



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 25/203 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
            +++II + I IPVG+               +  I+     LAA P+ V+      L ++
Sbjct: 219 AMMLIITATIAIPVGVMAAVYLEEFAPKNRWTDVIEVNINNLAAVPSIVYGLLGLALFIN 278

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +     +P +   L+M       ++    +   A P   +E A     +  +   + +L
Sbjct: 279 WLHVPRGSPLVG-GLVMALMALPTVIIATRSSLKAVPPSIREAALGVGASKAQTVFHHVL 337

Query: 500 PGIFPYYVTGAITACGGA-----------WNASIVSEVASWGHIHLRTTGLGAYIA-EST 547
           P   P  +TGAI +   A             A +     S+         +  +I   ++
Sbjct: 338 PLAMPGVMTGAILSLAHALGETAPLLMIGMVAFVPGAPESFTSSATVLP-VQVFIWENAS 396

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           E+         ++++  F++ +N
Sbjct: 397 ERAFHERTAAAIIVLLVFMIVMN 419


>gi|209919587|ref|YP_002293671.1| putative glycine/betaine/choline ABC transporter permease
           [Escherichia coli SE11]
 gi|209912846|dbj|BAG77920.1| putative glycine/betaine/choline ABC transporter permease component
           [Escherichia coli SE11]
          Length = 243

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALEAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALEAIIADRLFERLVQALSQ 240


>gi|161502690|ref|YP_001569802.1| hypothetical protein SARI_00737 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864037|gb|ABX20660.1| hypothetical protein SARI_00737 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 243

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +   +    ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAIVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                       +  AI A+    V  +  +    L  +P  +  ++    +S  Q+ + 
Sbjct: 110 MG--------FGQQPAIIALILYGVLPILQATLAGLGAVPASVISIASGMGMSRHQQLYQ 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              + +     + D+L  R
Sbjct: 215 QGAVLVALAAIIIDRLFER 233



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVF 433
             + L     + V +  + A ++ +  GI +        + +P  + +AA    FP    
Sbjct: 45  SFVALALAHFWLVGISSLFAIVVGVGAGIAV--TRESGKEFRPLVETIAAVGQTFPPVAV 102

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             + V  + +      + L L  +      IL   +AG  A P     +AS   ++  + 
Sbjct: 103 LAIAVPVMGFGQQPAIIALILYGVL----PILQATLAGLGAVPASVISIASGMGMSRHQQ 158

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G  T+       + ++         +  + LG  I       +  
Sbjct: 159 LYQVELPLAAPVILAGIRTSVIINIGTATIA-------STVGASTLGTPIIIGLSGFNTA 211

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            V+ G +++    + ++R  
Sbjct: 212 YVIQGAVLVALAAIIIDRLF 231


>gi|163800199|ref|ZP_02194100.1| phosphate ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175642|gb|EDP60436.1| phosphate ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 336

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 84/217 (38%), Gaps = 15/217 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      M+
Sbjct: 60  RIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGLSGIVLGQNWLPP-ALYGVATMI 118

Query: 74  SAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFT 119
            A ++S    +L       L A        +RL  V+ P ++++  IP + +    L   
Sbjct: 119 VASIVSTAGAVLVGVPVGILTAIFIAEIAPKRLADVIRPAVELLAGIPSVVYGFFGLVII 178

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V    N++        LA I  +    +  +      S+  +PR  +E S +   S    
Sbjct: 179 VPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKIYT 238

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + L VP +  G++  +++ +       +A  M++  
Sbjct: 239 IFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 275



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 15/176 (8%)

Query: 374 QDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLA 426
           Q+ L     G  TM    +V    A ++ +PVGI             ++  I+P  +LLA
Sbjct: 104 QNWLPPALYGVATMIVASIVSTAGAVLVGVPVGILTAIFIAEIAPKRLADVIRPAVELLA 163

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +       N  L   +++       ++        A P  
Sbjct: 164 GIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 223

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +KE + +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 224 YKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 279


>gi|58336701|ref|YP_193286.1| ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227903264|ref|ZP_04021069.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254018|gb|AAV42255.1| abc transporter permease [Lactobacillus acidophilus NCFM]
 gi|227869069|gb|EEJ76490.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 295

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 70/186 (37%), Gaps = 5/186 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF  +  +++ GI+  +L           +            +      +   ++   +I
Sbjct: 16  IFVGIVVLILAGILGNILITGIPHLSWYFLTSEASSYKAGGGVRDQLFNSLYLLVLTTII 75

Query: 79  SLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           SL      A   A   K   +  ++   + I+ S+P +    F  + F+  +        
Sbjct: 76  SLPIALGAAIYLAEYAKDTWVTNLIRTTIQILSSLPSIVVGLFGYLLFVVQFGFGFSIIS 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A     F   +  +T ++ ++L  +P+   E   +  LS W+    + +P ++PG++  
Sbjct: 136 GALALTFFNLPI--LTSNIEEALKGVPQAQREAGLALGLSNWKTIRGIVLPAALPGILTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 IILSAG 199



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +      +++  +   +  +V  +  GI    +   + H ++          +    V  
Sbjct: 1   MDAKKRDKLATAIIYIFVGIVVLILAGILGNILITGIPHLSWYFLTSEASSYKAGGGVRD 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ +V+  II+  I +   I++        +++ I+   Q+L++ P+ V   F  
Sbjct: 61  QLFNSLYLLVLTTIISLPIALGAAIYLAEYAKDTWVTNLIRTTIQILSSLPSIVVGLFGY 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V +      +  +L + F     +  N+       P   +E   +  ++ W+  R 
Sbjct: 121 LLFVVQFGFGFSIISGALALTFFNLPILTSNIEEALKGVPQAQREAGLALGLSNWKTIRG 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           I+LP   P  +TG I + G  + 
Sbjct: 181 IVLPAALPGILTGIILSAGRIFG 203


>gi|302872010|ref|YP_003840646.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574869|gb|ADL42660.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 284

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ IF F     +       +               +  +   +++  +  III   I +
Sbjct: 25  LITIFIFKEGFAIIKEYGLWNFILGRKWAPLSGKFGIFPMILGSVYVTLGAIIIGVPIGV 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  ++PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVSEKISRFVRPFVELLAGIPSVIYGFYGLVVVVPLIRKYLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +  +
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKVPNS 228



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 5/153 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           T   ++  + I +        L   S ++   + P ++++  IP +  GF    VV  + 
Sbjct: 72  TLGAIIIGVPIGVATAIFLGELV--SEKISRFVRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G  + A   I    +     ++ + S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKYLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +P +  G++ ++++ M       +A  M+    
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNS 222


>gi|90424735|ref|YP_533105.1| substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisB18]
 gi|90106749|gb|ABD88786.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris BisB18]
          Length = 518

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 21/217 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP-- 111
            +  +  LP Y        L+A+ + L  +   A LA +   L   L+    I+Q++P  
Sbjct: 9   WSEALSHLPDYLGNHVRVSLAALALGLAVSLPLAILARRRPLLRSTLLGFASIVQTVPGL 68

Query: 112 ---------ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
                    +L     ++ +F   +        L A+ A+    +  +  +    L  I 
Sbjct: 69  ALLALFYPLLLALAALSLSWFGVGFSA---FGFLPAVLALALYSMLPVLRNTITGLDGID 125

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             L E ++   ++  Q    + +P ++P ++  +  +    W    A+    +G T    
Sbjct: 126 PVLLEAAQGVGMTQRQSLVMVELPLALPVMMAGIRTA--AVWVIGTATLSTPIGQTS--- 180

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +G+YI   ++ Q+ + +L+       +    DQLL
Sbjct: 181 --LGNYIFAGLQTQNWVLVLFGCTAAAVLALAVDQLL 215



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 31/177 (17%)

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFP------------------ANVFFPLVVSCV 441
           + +P+ I    RP + S +  FA ++   P                  +  +F +  S  
Sbjct: 37  VSLPLAILARRRPLLRSTLLGFASIVQTVPGLALLALFYPLLLALAALSLSWFGVGFSAF 96

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            +      L   L +   +   +L N I G         E A    +T  +    + LP 
Sbjct: 97  GF------LPAVLALALYSMLPVLRNTITGLDGIDPVLLEAAQGVGMTQRQSLVMVELPL 150

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             P  + G  TA    W     +     G        LG YI    +  ++  V+ G
Sbjct: 151 ALPVMMAGIRTAA--VWVIGTATLSTPIGQTS-----LGNYIFAGLQTQNWVLVLFG 200


>gi|167037244|ref|YP_001664822.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040616|ref|YP_001663601.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter sp. X514]
 gi|256751999|ref|ZP_05492868.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914657|ref|ZP_07131973.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter sp. X561]
 gi|307724109|ref|YP_003903860.1| phosphate ABC transporter inner membrane subunit PstA
           [Thermoanaerobacter sp. X513]
 gi|320115663|ref|YP_004185822.1| phosphate ABC transporter inner membrane subunit PstA
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854856|gb|ABY93265.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter sp. X514]
 gi|166856078|gb|ABY94486.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749109|gb|EEU62144.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889592|gb|EFK84738.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter sp. X561]
 gi|307581170|gb|ADN54569.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter sp. X513]
 gi|319928754|gb|ADV79439.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 295

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 79  SLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+          A   K   L  ++    + + S+P +    F ++ F+ +         
Sbjct: 76  SVPIGLGAGIYMAEYAKPGLLTEIIRLSAETLSSMPSIVVGLFGLLVFVTMTGWGYSLVA 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A    +    V  MT     S+ ++P  L E S +   + WQ    + VP +MPG++  
Sbjct: 136 GALTLTVLNLPV--MTRVSEDSIRSVPNSLREASYALGATKWQTIVKVVVPAAMPGIITG 193

Query: 196 MMMSMS 201
           ++++  
Sbjct: 194 IILTAG 199



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 400 IWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           I +  GI++        ++  I+  A+ L++ P+     +VV                 +
Sbjct: 79  IGLGAGIYMAEYAKPGLLTEIIRLSAETLSSMPS-----IVVGLFGLLVFVTMTGWGYSL 133

Query: 457 IFGTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + G     + N+            + PN  +E + +   T W+    +++P   P  +TG
Sbjct: 134 VAGALTLTVLNLPVMTRVSEDSIRSVPNSLREASYALGATKWQTIVKVVVPAAMPGIITG 193

Query: 510 AITACGGAWN 519
            I   G  + 
Sbjct: 194 IILTAGRIFG 203


>gi|237718415|ref|ZP_04548896.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293371418|ref|ZP_06617849.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           ovatus SD CMC 3f]
 gi|299149070|ref|ZP_07042132.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           3_1_23]
 gi|229452348|gb|EEO58139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292633615|gb|EFF52173.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           ovatus SD CMC 3f]
 gi|298513831|gb|EFI37718.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           3_1_23]
          Length = 291

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 68/183 (37%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +++  I+  +++          I       +    +      T   M+ + + +  
Sbjct: 26  LCIVLILFAILGFIVYKGIGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFP 85

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A   RL   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 86  IGVMSGIYMNEYAPKGRLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGD--SILAG 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 144 SLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLIL 203

Query: 199 SMS 201
           ++ 
Sbjct: 204 ALG 206



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   V  GI   S  +I +  T       IW   + T + +V   + A  I 
Sbjct: 28  IVLILFAILGFIVYKGIGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFPIG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        +   I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGRLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|254505891|ref|ZP_05118036.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus 16]
 gi|219551114|gb|EED28094.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus 16]
          Length = 310

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 32  KERIFHGLFLASAVIGIVSLAIIAYFIVKESIPAFQEAGMSGIVLGQDWLPPALYGVATM 91

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 92  IVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 152 IVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIY 211

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 212 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 24/230 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---------QDVLYV 379
               ++   +R+ + L +    +       IA+  +   +  F           QD L  
Sbjct: 24  RKRKRVDWKERIFHGLFLASAVIGIVSLAIIAYFIVKESIPAFQEAGMSGIVLGQDWLPP 83

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV 432
              G  TM    V+    ++I  +PVG+             ++  I+P  +LLA  P+ V
Sbjct: 84  ALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLAGIPSVV 143

Query: 433 F--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +         PL+ +       N  L   +++       ++        A P  +KE + 
Sbjct: 144 YGFFGLVIIVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSL 203

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 204 ALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 253


>gi|88608117|ref|YP_506363.1| phosphate ABC transporter, permease protein PstA [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600286|gb|ABD45754.1| phosphate ABC transporter, permease protein PstA [Neorickettsia
           sennetsu str. Miyayama]
          Length = 397

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 62/147 (42%), Gaps = 8/147 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           V +L        + +L +  I +L        +++S  +  VL   ++ + S P + F  
Sbjct: 175 VGALIGSLYTVFVSLLVSFFIGVLTALWLGEYSSRSS-ITRVLEVSINNLSSTPPIVFGI 233

Query: 118 FTVVY---FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
             + +   F+ L     +   L   F +F   V     S   ++ ++P ++++ + +   
Sbjct: 234 LGLTFYINFLGLPRSSSLVGGLTLAFIMFPILVT----SSLHAIRSVPDNIKQAAFALGA 289

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           S  Q   +  +P SMPG++   ++ ++
Sbjct: 290 SKVQVILHHVLPLSMPGIMTGTILGIA 316



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANVFFP 435
           ++     +++ V V ++++  I +   +W+G    R  I+  ++     L++ P  VF  
Sbjct: 174 IVGALIGSLYTVFVSLLVSFFIGVLTALWLGEYSSRSSITRVLEVSINNLSSTPPIVFGI 233

Query: 436 LVVSCVSYYHLNPNLWLSL--LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    +   P     +  L +    + IL  + +    + P++ K+ A +   +  +
Sbjct: 234 LGLTFYINFLGLPRSSSLVGGLTLAFIMFPILVTSSLHAIRSVPDNIKQAAFALGASKVQ 293

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
              + +LP   P  +TG I         S    +  
Sbjct: 294 VILHHVLPLSMPGIMTGTILGIARILGESAPLLMIG 329


>gi|260430516|ref|ZP_05784489.1| putative abc transporter permease protein [Citreicella sp. SE45]
 gi|260418545|gb|EEX11802.1| putative abc transporter permease protein [Citreicella sp. SE45]
          Length = 248

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 17/205 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              T  R L+   + ++    Y   AA SR    + + +L I    P L  +   ++   
Sbjct: 58  LGETLGRTLAGFGLGMVLGTGYGIAAALSRTFRELTLWLLQISIFTPTLILIFLFLISLG 117

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 ++   L  +  + T         +  ++ +   +L E++ SF++   ++   + 
Sbjct: 118 RTNLTVIVLVGLVVMPVVGTY--------IRDAMGDFEDELTEMADSFKIGLRERVTGMY 169

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +PF +P L+    ++ +  W     SE+    +      GIG  +       ++  +L  
Sbjct: 170 LPFLVPPLLAAGRVAFTLAWKVAFLSEIFGFPN------GIGWQVKTGYDIYNIQLLLAW 223

Query: 245 MLTMLGVIFLYDQLLF---RPMIVW 266
           ++  + V+ + +QL+    R  + W
Sbjct: 224 LMLFIFVLLIAEQLMRLAQRRFVKW 248



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R +    +  ++    GI                Q+    P  +   L +  +   +
Sbjct: 61  TLGRTLAGFGLGMVLGTGYGIAAALSRTFRELTLWLLQISIFTPTLILIFLFLISLGRTN 120

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L   + + L+++     YI          F ++  E+A SF I        + LP + P 
Sbjct: 121 LTVIVLVGLVVMPVVGTYI----RDAMGDFEDELTEMADSFKIGLRERVTGMYLPFLVPP 176

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +     A   AW  + +SE+  + +      G+G  +    +  +   ++  +++    
Sbjct: 177 LLAAGRVAFTLAWKVAFLSEIFGFPN------GIGWQVKTGYDIYNIQLLLAWLMLFIFV 230

Query: 566 VLALNRFLWHPLYLYGTRCL 585
           +L   + +         R  
Sbjct: 231 LLIAEQLM-----RLAQRRF 245


>gi|253583182|ref|ZP_04860380.1| methionine uptake transporter family protein [Fusobacterium varium
           ATCC 27725]
 gi|251833754|gb|EES62317.1| methionine uptake transporter family protein [Fusobacterium varium
           ATCC 27725]
          Length = 215

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 76/210 (36%), Gaps = 20/210 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSI 110
             +      T   +  + + SL+  F    L   ++        RL  +L  I++ ++S 
Sbjct: 4   SMILDSTLETLYMVFFSTLFSLIMGFPIGILLVITKEGNILEKPRLNKILEMIINTLRSF 63

Query: 111 PILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           P   F+   +  F ++           AAI  +  S    +   +  +L  + R L E S
Sbjct: 64  P---FIILMICLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDRGLIEAS 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY- 228
            S   S       + +P +MP ++  + ++       V++          I   G+G   
Sbjct: 121 SSMGASNSTIILKVMIPETMPHIIHGITVT-------VISLIGFSAMAGTIGAGGLGDLA 173

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           I    +      ++Y+++ ++ ++ +    
Sbjct: 174 IRFGYQRFKTDIMIYSVIVIILLVQVLQSF 203



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 18/205 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           ++     T++ V    + + I+  P+GI +          +P ++  ++     L +FP 
Sbjct: 6   ILDSTLETLYMVFFSTLFSLIMGFPIGILLVITKEGNILEKPRLNKILEMIINTLRSFPF 65

Query: 431 NVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA-FPNDFKEVASSFHI 488
            +    L                +++ +  +    +  +I GA         E +SS   
Sbjct: 66  IILMICLFPLSRIIVGTTIGSTAAIVPLSISAAPFVARMIEGALNEVDRGLIEASSSMGA 125

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAEST 547
           +       +++P   P+ + G           S ++         +   GLG   I    
Sbjct: 126 SNSTIILKVMIPETMPHIIHGITVTVISLIGFSAMA-------GTIGAGGLGDLAIRFGY 178

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
           ++     ++  V+++   V  L  F
Sbjct: 179 QRFKTDIMIYSVIVIILLVQVLQSF 203


>gi|118615948|ref|YP_904280.1| ABC transporter permease [Mycobacterium ulcerans Agy99]
 gi|118568058|gb|ABL02809.1| ABC transporter permease [Mycobacterium ulcerans Agy99]
          Length = 215

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   A +    +  A++++     +   L   S         +  +  +IP    L 
Sbjct: 11  WSVLWFLAYQHISLVGQALILATAIALILGVLIYNSPLRVAAGNAVTAVGLTIPSYALLG 70

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V           +G   + I   F   V+ +  ++   L  + + L E +R   +S  
Sbjct: 71  VLVGIVG-------LGVLPSVIMPTFFG-VFPILRNVVVGLTGVDKGLVESARGMGMSRL 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                L +P + P ++  + +S +     + A     +G      PG+G YI   I    
Sbjct: 123 TTLVRLELPLAWPVIMTGVRVS-AQMLMGIAAIVAFALG------PGLGGYIFSGISRMG 175

Query: 238 ----LLAILYAMLTMLGVIFLYDQLL 259
                 +I+ A + +L +  + D +L
Sbjct: 176 GANATNSIVAATIGILILAVILDTVL 201



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 7/198 (3%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              + +L    +  V   +I+A+ I + +G+ I   P   +       +    P+     
Sbjct: 11  WSVLWFLAYQHISLVGQALILATAIALILGVLIYNSPLRVAAGNAVTAVGLTIPSYALLG 70

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++V  V    L   +  +   +F     IL NV+ G +       E A    ++      
Sbjct: 71  VLVGIVGLGVLPSVIMPTFFGVF----PILRNVVVGLTGVDKGLVESARGMGMSRLTTLV 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  +TG   +   A     ++ + ++         + + I+      +   +
Sbjct: 127 RLELPLAWPVIMTGVRVS---AQMLMGIAAIVAFALGPGLGGYIFSGISRMGGANATNSI 183

Query: 556 VLGVLIMCCFVLALNRFL 573
           V   + +    + L+  L
Sbjct: 184 VAATIGILILAVILDTVL 201


>gi|145221802|ref|YP_001132480.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315446461|ref|YP_004079340.1| ABC-type proline/glycine betaine transporter, permease
           [Mycobacterium sp. Spyr1]
 gi|145214288|gb|ABP43692.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315264764|gb|ADU01506.1| ABC-type proline/glycine betaine transport system, permease
           component [Mycobacterium sp. Spyr1]
          Length = 257

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L           + A+  S L       L   + R   V+V  ++ ++++P      
Sbjct: 20  PAGLTARILEHLQYTVIAVFFSALIAVPLGMLIGHTGRGTFVVVTGVNALRALP------ 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L         +    A+    +  +    Y  + N+ R + + +RS  ++  
Sbjct: 74  --TLGVLLLGVLLWGLGLIPPTVALMLLGIPPLLAGTYSGIANVDRSVVDAARSMGMTES 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    +  P ++P ++  +  +        +             L G+G Y+   IK ++
Sbjct: 132 RILLRVETPNALPLILGGLRTA-------TLQIVATATVAAYASLGGLGRYLIDGIKVRE 184

Query: 238 LLAILYAMLTM 248
               L   L +
Sbjct: 185 FYLALVGALMV 195



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 11/202 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +++ +I     +     +       +   V+ +  +++I +P+G+ IG     +  +   
Sbjct: 6   EALSFIFTAANWAGPAGLTARILEHLQYTVIAVFFSALIAVPLGMLIGHTGRGTFVVVTG 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V       + P + L LL I      +L    +G +       +
Sbjct: 66  VNALRALPTLGVLLLGVLLWGLGLIPPTVALMLLGIP----PLLAGTYSGIANVDRSVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S  +T  R    +  P   P  + G  TA       ++     +    +    GLG 
Sbjct: 122 AARSMGMTESRILLRVETPNALPLILGGLRTA-------TLQIVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMC 563
           Y+ +  +   F   ++G L++ 
Sbjct: 175 YLIDGIKVREFYLALVGALMVT 196


>gi|229488438|ref|ZP_04382304.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
 gi|229323942|gb|EEN89697.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
          Length = 246

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 10/210 (4%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           I ++++   +     +  L    +      + +A++I IP+G++IG     S  +   A 
Sbjct: 2   ISFLLDGSHWTGPDGIPTLLVQHLMYTFAALAVAAVIAIPLGLYIGHTGRGSVVVAGLAN 61

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFK 480
            L A P      L+V  ++    N   +L    ++++      IL N  AG  A      
Sbjct: 62  SLRALPTIGLLILLVLIIAPSFPNKLAYLIPSLIVLVLLAIPPILTNTYAGVRAVDQAAV 121

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A        R    + +P   P  ++G  +A     + + V+   S G       GLG
Sbjct: 122 DAARGMGFRSMRILTEVEIPCALPLMLSGIRSAVLQIVSTATVAAYISLG-------GLG 174

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             + +   +  + ++  G +++    L  +
Sbjct: 175 RLLIDGKAQSDYGQMAAGAVLVSLIALVFD 204



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 74/199 (37%), Gaps = 8/199 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P    +  +   +A+ ++ +           + R  +V+  + + ++++P +G L 
Sbjct: 14  PDGIPTLLVQHLMYTFAALAVAAVIAIPLGLYIGHTGRGSVVVAGLANSLRALPTIGLLI 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+     +P K+     + I  +  + +  +  + Y  +  + +   + +R       
Sbjct: 74  LLVLIIAPSFPNKLAYLIPSLIVLVLLA-IPPILTNTYAGVRAVDQAAVDAARGMGFRSM 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + +P ++P ++  +  ++         +  I +G       G+G  +     + D
Sbjct: 133 RILTEVEIPCALPLMLSGIRSAVLQIVSTATVAAYISLG-------GLGRLLIDGKAQSD 185

Query: 238 LLAILYAMLTMLGVIFLYD 256
              +    + +  +  ++D
Sbjct: 186 YGQMAAGAVLVSLIALVFD 204


>gi|225572970|ref|ZP_03781725.1| hypothetical protein RUMHYD_01161 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039674|gb|EEG49920.1| hypothetical protein RUMHYD_01161 [Blautia hydrogenotrophica DSM
           10507]
          Length = 273

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 9/198 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +    A  +SLL     +   A+ +    +L  ++  ++ +P + FL    + F  + 
Sbjct: 74  SLIISFGATGLSLLIGLPASYSMARYK--QNMLQIVVLCIRIVPSIAFLVPVYLMFSKIG 131

Query: 128 -PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G   G  LA +       VW M          +P +LEE +     S    F  + +P
Sbjct: 132 LTGTYTGIILANMLIAVPFVVWVMIP----YFEGVPVELEESALIDGASRMTCFLRIMLP 187

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            S+PG++   ++S    W   +   ++   DT I    I ++++    E +   ++ A +
Sbjct: 188 LSLPGIMTVTILSFINAWNNFMFGLILGNSDTKILPTVIFNFLSH--TEINWSGLMAAAI 245

Query: 247 TMLGVIFLYDQLLFRPMI 264
            +   I L    L R ++
Sbjct: 246 IVTLPIILLSVFLQRYIV 263



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 69/191 (36%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF-PLVVSCVSYY 444
           ++        ++ +I +P    +       + +Q     +   P+  F  P+ +      
Sbjct: 74  SLIISFGATGLSLLIGLPASYSMARYKQ--NMLQIVVLCIRIVPSIAFLVPVYLMFSKIG 131

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  + L  +     ++++ +I      P + +E A     +    +  I+LP   P
Sbjct: 132 LTGTYTGIILANMLIAVPFVVWVMIPYFEGVPVELEESALIDGASRMTCFLRIMLPLSLP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T  I +   AWN  +   +       +  T +  +++    + ++  ++   +I+  
Sbjct: 192 GIMTVTILSFINAWNNFMFGLILGNSDTKILPTVIFNFLSH--TEINWSGLMAAAIIVTL 249

Query: 565 FVLALNRFLWH 575
            ++ L+ FL  
Sbjct: 250 PIILLSVFLQR 260


>gi|170697508|ref|ZP_02888598.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
 gi|170137531|gb|EDT05769.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria IOP40-10]
          Length = 392

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            + A R       ++  +L+         A+   +  V++P+L+I+Q+IP +      + 
Sbjct: 182 WREAIRHVSLAGGSVAAALVAGVPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMMA 241

Query: 122 YFMNLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
               L     + A L         A+ A+F   +  +  S+   L  +P  + E +R+  
Sbjct: 242 PLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMG 301

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++  Q+   + +  ++P ++  + +
Sbjct: 302 MTRVQRLLGVDLVLALPVILSGVRI 326



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 51/148 (34%), Gaps = 13/148 (8%)

Query: 380 IWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
            W   I    +    + A+++  +P+GI       + + + P   ++   P+   + L++
Sbjct: 181 FWREAIRHVSLAGGSVAAALVAGVPLGIACARIAPVRTVVMPVLNIVQTIPSIAMYGLMM 240

Query: 439 SCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +     +  L  +L             +   +   I  +V+ G    P    E A + 
Sbjct: 241 APLGLLAAHVPLAAALGIRGIGVAPAVLALFLYSLLPIASSVVVGLEQVPPHVTEAARAM 300

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
            +T  +    + L    P  ++G     
Sbjct: 301 GMTRVQRLLGVDLVLALPVILSGVRIVL 328


>gi|119720392|ref|YP_920887.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
 gi|119525512|gb|ABL78884.1| binding-protein-dependent transport systems inner membrane
           component [Thermofilum pendens Hrk 5]
          Length = 544

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 81/568 (14%), Positives = 157/568 (27%), Gaps = 65/568 (11%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+   + + I+  L + +     PR + ++V   L+          +    L   +++ L
Sbjct: 12  LILLYVAVFILYPLAYLVLFVVSPRSLSEVVAF-LESDLFLSSLKNSLYVALVTTLLATL 70

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY-------------- 127
               YA    + + LG   V     M ++        +V++ +  +              
Sbjct: 71  IGVPYAYALHRYKVLGKNYVLSATFMPTMVPPFVGALSVIFLLGRFGTVNLLLMEWGLIE 130

Query: 128 -PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P   I      I     +    +  ++Y SL  + R LEE + S      ++F+ + +P
Sbjct: 131 RPINFIYGLHGVILVQTITLFPWIAINVYNSLLKLDRSLEEAAESLGAPPIRRFFTVTLP 190

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              PGL+  + M  S    F   +  IV+G   +  P     I  AI E  +    Y + 
Sbjct: 191 AVTPGLMTGLFMVFSFA--FTDYATPIVLGQYELLAPQAFVNIQQAIDESRVRTGTYMVF 248

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ML ++           +       L     +           R    +          F
Sbjct: 249 FMLVIVIGL-------FLAMKKYISLREYASLRLPRPVEEVELRGVRRVLVPLLIYLALF 301

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             L  +V     +L       P        N    +     +       AIG A   +  
Sbjct: 302 VGLLPHVFVFVISLSKAWSLTPLPTSYSLENFATIFHSPTPFVNTAIYAAIGTAICLLVG 361

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +   +      + +     +   ++ ++          GI +G                 
Sbjct: 362 MFGAYVVTRTNHPLNEVIDSALSMMFVVP---------GIVVGTS--------FLFAFRK 404

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASAFPNDFKEVAS 484
             P                   + WL + ++  T    Y +    A         +E A 
Sbjct: 405 DIPVMGVL-------------GSTWLIMPLMLATRRITYTIRYAYATYVTIRRSLEEAAY 451

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS--------EVASWGHIHLRT 536
            F       +  I++P      + G + +     N    S        E  +       T
Sbjct: 452 VFGEKPLGTFFKIVMPNAIYGILAGTLFSFIEIVNELTASLFLYKPGWETVTIQMFIQIT 511

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCC 564
            G     A          + L  + M  
Sbjct: 512 AGQFPVSAAYAVVLFVVSIALATVAMTL 539



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 74/252 (29%), Gaps = 27/252 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           +  +     V    +      + ++V+  +  +V+  +           +++  +V  ++
Sbjct: 8   VARLLILLYVAVFILYPLAYLVLFVVSPRSLSEVVAFLESDLFLSSLKNSLYVALVTTLL 67

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---- 452
           A++I +P    +     +       A  +          L V  +       NL L    
Sbjct: 68  ATLIGVPYAYALHRYKVLGKNYVLSATFMPTMVPPFVGALSVIFLLGRFGTVNLLLMEWG 127

Query: 453 --------------SLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
                          +L+   T +  I  NV           +E A S      R +  +
Sbjct: 128 LIERPINFIYGLHGVILVQTITLFPWIAINVYNSLLKLDRSLEEAAESLGAPPIRRFFTV 187

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP + P  +TG       A+     +     G   L        I ++ ++        
Sbjct: 188 TLPAVTPGLMTGLFMVFSFAFTD--YATPIVLGQYELLAPQAFVNIQQAIDESRVRTGTY 245

Query: 558 GVLIMCCFVLAL 569
            V  M   V+ L
Sbjct: 246 MVFFMLVIVIGL 257


>gi|25028403|ref|NP_738457.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259507460|ref|ZP_05750360.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|23493688|dbj|BAC18657.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259164948|gb|EEW49502.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
          Length = 316

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 98/265 (36%), Gaps = 24/265 (9%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P    RR   N    +A  LV   +   +  + +     D     P  LD  +   Y   
Sbjct: 14  PGPRGRR--SNTIITIATTLVAVAVLFWVGSVLQENGQLDGDKWTPF-LDPQTWTTYLLP 70

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-----PILDIMQSIPILGFLTFTVVY 122
                L A V S+L   +  TL    R   + L+      I++  ++IP+L  + F    
Sbjct: 71  GLWGTLKAAVASILLALIMGTLLGLGRISEIRLLRWFCGIIIETFRAIPVLILMIFAYQL 130

Query: 123 FM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           F    L P + + A  A +F +       +   +   + ++P+   E + +  +S  Q  
Sbjct: 131 FARYQLVPSRQL-AFAAVVFGLTMYNGSVIAEILRSGIASLPKGQREAAIALGMSTRQTT 189

Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W + +P +    +P L+  M++++         +    +G   +   GI S    ++   
Sbjct: 190 WSILLPQAVAAMLPALIAQMVIALKDS------ALGYQIGYIEVVRSGIQS---ASVNRN 240

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
            L A+    + M+ + F    L  R
Sbjct: 241 YLAALAVVAVIMILINFALTALAER 265



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 19/207 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           T+   V  I++A I+   +G+  I     +        +   A P  +         + Y
Sbjct: 75  TLKAAVASILLALIMGTLLGLGRISEIRLLRWFCGIIIETFRAIPVLILMIFAYQLFARY 134

Query: 445 HLNPNLWLSLL-MIFGTQWY----ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            L P+  L+   ++FG   Y    I   + +G ++ P   +E A +  ++  +    I+L
Sbjct: 135 QLVPSRQLAFAAVVFGLTMYNGSVIAEILRSGIASLPKGQREAAIALGMSTRQTTWSILL 194

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P      +   I     A   S +      G+I +  +G    I  ++   ++   +  +
Sbjct: 195 PQAVAAMLPALIAQMVIALKDSALG--YQIGYIEVVRSG----IQSASVNRNY---LAAL 245

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLR 586
            ++   ++ +N      L     R  R
Sbjct: 246 AVVAVIMILINFA----LTALAERIQR 268


>gi|226949880|ref|YP_002804971.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842022|gb|ACO84688.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A2 str. Kyoto]
          Length = 307

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G    + LA I  +    +  +      ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYGGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISN 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+ +     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGITVFSKGVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYGGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|15802678|ref|NP_288705.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832269|ref|NP_311042.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|74312652|ref|YP_311071.1| putative transport system permease [Shigella sonnei Ss046]
 gi|157157695|ref|YP_001463474.1| quaternary amine ABC transporter permease [Escherichia coli
           E24377A]
 gi|157161610|ref|YP_001458928.1| quaternary amine ABC transporter permease [Escherichia coli HS]
 gi|168750499|ref|ZP_02775521.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|168757701|ref|ZP_02782708.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|168764218|ref|ZP_02789225.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|168771593|ref|ZP_02796600.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|168777295|ref|ZP_02802302.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|168783697|ref|ZP_02808704.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|168788929|ref|ZP_02813936.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|168801192|ref|ZP_02826199.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|170019554|ref|YP_001724508.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|187733767|ref|YP_001879543.1| ABC transporter quaternary amine uptake (QAT) family, permease
           [Shigella boydii CDC 3083-94]
 gi|191165373|ref|ZP_03027215.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|193062341|ref|ZP_03043436.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|193070499|ref|ZP_03051439.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|194427200|ref|ZP_03059751.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|194436275|ref|ZP_03068377.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 101-1]
 gi|195935499|ref|ZP_03080881.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli O157:H7 str. EC4024]
 gi|208808206|ref|ZP_03250543.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208813773|ref|ZP_03255102.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|208820516|ref|ZP_03260836.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396328|ref|YP_002271530.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|217327922|ref|ZP_03444005.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|218695740|ref|YP_002403407.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218699262|ref|YP_002406891.1| putative ABC transporter permease [Escherichia coli IAI39]
 gi|253772944|ref|YP_003035775.1| binding-protein-dependent transporters inner membrane component
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162143|ref|YP_003045251.1| putative transporter subunit membrane component of ABC superfamily
           [Escherichia coli B str. REL606]
 gi|254794021|ref|YP_003078858.1| putative ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|256017704|ref|ZP_05431569.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Shigella sp. D9]
 gi|256022187|ref|ZP_05436052.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia sp. 4_1_40B]
 gi|260844735|ref|YP_003222513.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|260856102|ref|YP_003229993.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|260868831|ref|YP_003235233.1| putative transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|261223418|ref|ZP_05937699.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259032|ref|ZP_05951565.1| putative transporter subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283376|ref|YP_003500194.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|293415412|ref|ZP_06658055.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|293446479|ref|ZP_06662901.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|297519097|ref|ZP_06937483.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli OP50]
 gi|300818872|ref|ZP_07099077.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300821768|ref|ZP_07101913.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300902222|ref|ZP_07120222.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300924497|ref|ZP_07140466.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929303|ref|ZP_07144777.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300948227|ref|ZP_07162348.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300955850|ref|ZP_07168191.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301029463|ref|ZP_07192550.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301305172|ref|ZP_07211271.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301325238|ref|ZP_07218756.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301644145|ref|ZP_07244153.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307138786|ref|ZP_07498142.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli H736]
 gi|307311292|ref|ZP_07590936.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|309793006|ref|ZP_07687434.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331642751|ref|ZP_08343886.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H736]
 gi|331653555|ref|ZP_08354556.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli M718]
 gi|331668827|ref|ZP_08369675.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA271]
 gi|331678077|ref|ZP_08378752.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H591]
 gi|332278719|ref|ZP_08391132.1| membrane component of ABC superfamily [Shigella sp. D9]
 gi|12516433|gb|AAG57260.1|AE005444_10 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13362484|dbj|BAB36438.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|73856129|gb|AAZ88836.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|157067290|gb|ABV06545.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli HS]
 gi|157079725|gb|ABV19433.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E24377A]
 gi|169754482|gb|ACA77181.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli ATCC 8739]
 gi|187430759|gb|ACD10033.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella boydii CDC 3083-94]
 gi|187767445|gb|EDU31289.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015332|gb|EDU53454.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4113]
 gi|188999009|gb|EDU67995.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355341|gb|EDU73760.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4401]
 gi|189359691|gb|EDU78110.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4486]
 gi|189365749|gb|EDU84165.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4501]
 gi|189371329|gb|EDU89745.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC869]
 gi|189376610|gb|EDU95026.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC508]
 gi|190904536|gb|EDV64243.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B7A]
 gi|192932007|gb|EDV84606.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E22]
 gi|192956193|gb|EDV86656.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli E110019]
 gi|194414821|gb|EDX31092.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli B171]
 gi|194425003|gb|EDX40988.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli 101-1]
 gi|208728007|gb|EDZ77608.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4206]
 gi|208735050|gb|EDZ83737.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4045]
 gi|208740639|gb|EDZ88321.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157728|gb|ACI35161.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. EC4115]
 gi|209766458|gb|ACI81541.1| putative transport system permease protein [Escherichia coli]
 gi|209766460|gb|ACI81542.1| putative transport system permease protein [Escherichia coli]
 gi|209766462|gb|ACI81543.1| putative transport system permease protein [Escherichia coli]
 gi|209766464|gb|ACI81544.1| putative transport system permease protein [Escherichia coli]
 gi|209766466|gb|ACI81545.1| putative transport system permease protein [Escherichia coli]
 gi|217320289|gb|EEC28714.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. TW14588]
 gi|218352472|emb|CAU98249.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218369248|emb|CAR17005.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI39]
 gi|226237483|dbj|BAH47005.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O55:H7]
 gi|242377770|emb|CAQ32533.1| yehW, subunit of YehW/YehX/YehY/YehZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253323988|gb|ACT28590.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974044|gb|ACT39715.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253978212|gb|ACT43882.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|254593421|gb|ACT72782.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257754751|dbj|BAI26253.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|257759882|dbj|BAI31379.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|257765187|dbj|BAI36682.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|290763249|gb|ADD57210.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. CB9615]
 gi|291323309|gb|EFE62737.1| osmoprotectant transport system permease [Escherichia coli B088]
 gi|291433060|gb|EFF06039.1| osmoprotectant transport system permease [Escherichia coli B185]
 gi|299877666|gb|EFI85877.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300317317|gb|EFJ67101.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405741|gb|EFJ89279.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300419306|gb|EFK02617.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300452233|gb|EFK15853.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462722|gb|EFK26215.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300525610|gb|EFK46679.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300528491|gb|EFK49553.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839576|gb|EFK67336.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300847898|gb|EFK75658.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301077443|gb|EFK92249.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306908798|gb|EFN39295.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli W]
 gi|308123292|gb|EFO60554.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309702442|emb|CBJ01768.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
 gi|315061439|gb|ADT75766.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315255359|gb|EFU35327.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315615366|gb|EFU95998.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 3431]
 gi|320176635|gb|EFW51677.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Shigella dysenteriae CDC 74-1112]
 gi|320178925|gb|EFW53888.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Shigella boydii ATCC 9905]
 gi|320192256|gb|EFW66901.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli O157:H7 str. EC1212]
 gi|320199722|gb|EFW74311.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli EC4100B]
 gi|320641194|gb|EFX10672.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. G5101]
 gi|320646582|gb|EFX15493.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. 493-89]
 gi|320651837|gb|EFX20212.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H- str. H 2687]
 gi|320657561|gb|EFX25359.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663167|gb|EFX30476.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667918|gb|EFX34821.1| ABC transporter quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli O157:H7 str. LSU-61]
 gi|323152355|gb|EFZ38644.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli EPECa14]
 gi|323168737|gb|EFZ54417.1| inner membrane ABC transporter permease protein yehW [Shigella
           sonnei 53G]
 gi|323171779|gb|EFZ57423.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli LT-68]
 gi|323184248|gb|EFZ69625.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 1357]
 gi|323377980|gb|ADX50248.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli KO11]
 gi|323936742|gb|EGB33027.1| inner membrane transport system [Escherichia coli E1520]
 gi|323940803|gb|EGB36991.1| inner membrane transport system [Escherichia coli E482]
 gi|323944945|gb|EGB41010.1| inner membrane transport system [Escherichia coli H120]
 gi|323961636|gb|EGB57241.1| inner membrane transport system [Escherichia coli H489]
 gi|323972888|gb|EGB68086.1| inner membrane transport system [Escherichia coli TA007]
 gi|324015914|gb|EGB85133.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324118031|gb|EGC11930.1| inner membrane transport system [Escherichia coli E1167]
 gi|326339470|gb|EGD63281.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli O157:H7 str. 1125]
 gi|326343932|gb|EGD67693.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Escherichia coli O157:H7 str. 1044]
 gi|331039549|gb|EGI11769.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H736]
 gi|331048404|gb|EGI20480.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli M718]
 gi|331064021|gb|EGI35932.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA271]
 gi|331074537|gb|EGI45857.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H591]
 gi|332093258|gb|EGI98318.1| inner membrane ABC transporter permease protein yehW [Shigella
           boydii 5216-82]
 gi|332101071|gb|EGJ04417.1| membrane component of ABC superfamily [Shigella sp. D9]
          Length = 243

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|325957160|ref|YP_004292572.1| phosphate ABC transporter permease pstc [Lactobacillus acidophilus
           30SC]
 gi|325333725|gb|ADZ07633.1| phosphate ABC transporter, permease pstc [Lactobacillus acidophilus
           30SC]
          Length = 301

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L A++I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLALLICLPFAIGSAVYMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGMT 138

Query: 122 YFMNLY-----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             + L      P     + LAA   +       +T     ++ ++P+   E +     + 
Sbjct: 139 KIVPLIKKIFHPTMGGFSVLAASIVLAIMIFPTITTVSADAIKSVPKSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQTIGKVVLPAASGGILTGVILGLARAIGEALAVAMVIGKTRAFAT 244



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ ++I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLALLICLPFAIGSAVYMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGMTKIVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWW 494
           L+           ++  + +++    +  +  V      + P  ++E A     T W+  
Sbjct: 143 LIKKIFHPTMGGFSVLAASIVLAIMIFPTITTVSADAIKSVPKSYREGAYGLGATRWQTI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG I     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVILGLARAIGEALAVAMVIGKTRAFATSLL 247


>gi|210613852|ref|ZP_03289946.1| hypothetical protein CLONEX_02159 [Clostridium nexile DSM 1787]
 gi|210150943|gb|EEA81951.1| hypothetical protein CLONEX_02159 [Clostridium nexile DSM 1787]
          Length = 557

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 69/460 (15%), Positives = 152/460 (33%), Gaps = 49/460 (10%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVL----------VPILDIMQSIPILGFLTF 118
            L + +  VI ++       L  K +++  +L          + ++  +Q     G LT 
Sbjct: 69  VLSVFTCGVIGIMLAMYMTFLVGKWKKVIHILLLSPMMIPGVITVISFIQLYGESGILTK 128

Query: 119 TVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            + Y ++L         L AI F I  +Q      ++Y +L  +     E +RS   S W
Sbjct: 129 AIQYALHLEKIPYEFQGLGAIVFVITYTQYVYFYLNVYVALKYVDNSGIEAARSMGASWW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + F  +  P   P ++ + +++ + G     A  +I  G  V+    + S    A    +
Sbjct: 189 KIFRDVIWPVITPAVLSSAIVTFASGISAFSAPNLIGGGYKVLSTQIVRS---KANNHME 245

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
           + ++   +L ++ +  +     F        ++R + T    P  +        +   R 
Sbjct: 246 MASVQVIVLFLISLAVMMTIQYF------GKRYRGQSTERSTPIQAGKGRRSVLSIVSRL 299

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           I +    F       +  L  T                 N RV +        ++  + +
Sbjct: 300 IVFLQIVFIILPIVTIVYLSFTETSSIMQEIFPHAFTLENYRVIFEKPRVLKPLLNSLKM 359

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI---IIASIIWIPVGIWIGFRPHI 414
                ++G ++       +L        T  +V++L+   + AS++ I +          
Sbjct: 360 SAIAVAVGLLI-TVPSSYMLVKYKNKFHTFLKVLLLLPWTMPASVVAINL-----INAFG 413

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
              I  F Q L         P+  +  +   L  +   ++L                   
Sbjct: 414 QETIFAFGQSL--IGGFAILPIAYTITAIPLLLNSNETAILG------------------ 453

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              + +E + S     +  +  +++P I P  + G +   
Sbjct: 454 MNPNIEEASKSLGANMFYTFTRVVIPNIAPGILAGGVLVL 493



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 6/121 (4%)

Query: 450 LWLSLLMIFGTQW-YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           L   + +I  TQ+ Y   NV        N   E A S   + W+ +R +I P I P  ++
Sbjct: 146 LGAIVFVITYTQYVYFYLNVYVALKYVDNSGIEAARSMGASWWKIFRDVIWPVITPAVLS 205

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            AI       +A     +   G+  L T      I  S          + V+++    LA
Sbjct: 206 SAIVTFASGISAFSAPNLIGGGYKVLSTQ-----IVRSKANNHMEMASVQVIVLFLISLA 260

Query: 569 L 569
           +
Sbjct: 261 V 261


>gi|225375062|ref|ZP_03752283.1| hypothetical protein ROSEINA2194_00685 [Roseburia inulinivorans DSM
           16841]
 gi|225213134|gb|EEG95488.1| hypothetical protein ROSEINA2194_00685 [Roseburia inulinivorans DSM
           16841]
          Length = 394

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 20/199 (10%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
             +    ++ +I++ +I +P+GI +  +    +      +   + A P+  +  L  +  
Sbjct: 179 GYSFVIGLIAVIMSYLIGVPLGILMARKKDKLVDKIGTLYIVFIIAVPSLAYIFLFKAIG 238

Query: 442 SYYHL-------NPNLWLSLLMIFGTQWYILFNVIAGAS-----AFPNDFKEVASSFHIT 489
             + L       +P+  + +L I       + N++            +D+ + A S  +T
Sbjct: 239 GSFGLPTTFDMESPSRLMYILPIVSLALPSIANLMKWIRRYMIDQMNSDYVKFARSGGLT 298

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +   IL       + G   A  GA   +I++E            G+G  + E+  K
Sbjct: 299 EGEIFTRHILKNAAIPIIQGIPAAVLGALTGAIITERV------YVVPGIGNLLTEAINK 352

Query: 550 GSFPEVVLGVLIMCCFVLA 568
                +V G L      + 
Sbjct: 353 YDNGVIVGGTLFYAILTVT 371



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 21/196 (10%)

Query: 73  LSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFL--------TFTVVY 122
           L A+++S L       L A  K + +  +    +  + ++P L ++        +F +  
Sbjct: 186 LIAVIMSYLIGVPLGILMARKKDKLVDKIGTLYIVFIIAVPSLAYIFLFKAIGGSFGLPT 245

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             ++     +   L  +     S    M +     +  +  D  + +RS  L+  + F  
Sbjct: 246 TFDMESPSRLMYILPIVSLALPSIANLMKWIRRYMIDQMNSDYVKFARSGGLTEGEIFTR 305

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI- 241
             +  +   ++  +  ++ G     + +E       V  +PGIG+ +  AI + D   I 
Sbjct: 306 HILKNAAIPIIQGIPAAVLGALTGAIITE------RVYVVPGIGNLLTEAINKYDNGVIV 359

Query: 242 ----LYAMLTMLGVIF 253
                YA+LT+  +I 
Sbjct: 360 GGTLFYAILTVTSLIL 375


>gi|120403889|ref|YP_953718.1| phosphonate ABC transporter inner membrane subunit [Mycobacterium
           vanbaalenii PYR-1]
 gi|119956707|gb|ABM13712.1| phosphonate ABC transporter, inner membrane subunit [Mycobacterium
           vanbaalenii PYR-1]
          Length = 511

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 78/524 (14%), Positives = 147/524 (28%), Gaps = 81/524 (15%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPI 112
           D   +   A  T L  +   V++ + +   A LAA++      +  V   I+   +++P 
Sbjct: 52  DPGRIGVLAVETLLMAVLGTVLAAVASVPLAFLAARNTSPHPAVYAVARAIITFCRAMPD 111

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L F    V++   L  G + G     I A+    +  +      ++        E  RS 
Sbjct: 112 LLF---AVLFVRALGIGVLPG-----ILALALHSIGMLGKLFADAIEQSDPGPREAVRSA 163

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                ++     +P  +P  +   +  +       V    +  G       GIG  +  A
Sbjct: 164 GAGYLREMVNAVLPQVIPSWIGTFIYRIDINLRMSVVLGFVGAG-------GIGFALQDA 216

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
           ++       L  +  +L VI                                +L +  + 
Sbjct: 217 LRGLIYPRALGIVCVILAVISAM----------------------------ELLSIVVRR 248

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             L                       T           F  L      +  + +    + 
Sbjct: 249 MLLTGSA-------------------TDPRRDRAARVGFSALLVGTTAAAFVVLEINPLS 289

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
               +  A +    +V          +      T+   VV   I  ++ IP GI      
Sbjct: 290 LFTWVWPALEVFTRMVPPNFGALGGDLFVAALQTVAIAVVATAIGIVLSIPAGILAARNI 349

Query: 413 HISSKIQPF----AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
             ++ +         L+ A P  +   L V  V+   L P      L +    +     V
Sbjct: 350 TPNAAVYWVARGWILLVRAVPELI---LAVVFVAALGLGPVAGACALALASIGFLAKL-V 405

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                       E   +     W+     ++P   P  V       G +     V+   S
Sbjct: 406 ADAVEEIDPGPLEAVRAVGGGWWKTLFAAVIPQALPAMV-------GSSLYMFDVNVRTS 458

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +   G+G  + ES    +F      VL++   V A+ R 
Sbjct: 459 TILGIVGAGGIGYLLFESIRTLNFDVAGAIVLVIFVIVYAIERL 502



 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 19/209 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLL 425
                D   +  L   T+   V+  ++A++  +P+           P + +  +      
Sbjct: 47  PPRLDDPGRIGVLAVETLLMAVLGTVLAAVASVPLAFLAARNTSPHPAVYAVARAIITFC 106

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            A P  +F  L V  +    L   L L+L  + + G  +                 +E  
Sbjct: 107 RAMPDLLFAVLFVRALGIGVLPGILALALHSIGMLGKLF------ADAIEQSDPGPREAV 160

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S      R     +LP + P ++   I         S+V      G       G+G  +
Sbjct: 161 RSAGAGYLREMVNAVLPQVIPSWIGTFIYRIDINLRMSVVLGFVGAG-------GIGFAL 213

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            ++     +P  +  V ++   + A+   
Sbjct: 214 QDALRGLIYPRALGIVCVILAVISAMELL 242


>gi|331703213|ref|YP_004399900.1| spermidine/putrescine ABC transporter permease [Mycoplasma mycoides
           subsp. capri LC str. 95010]
 gi|328801768|emb|CBW53921.1| Spermidine/putrescine ABC transporter permease component
           [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 330

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +   +  ++++ I+ ++   I     P D + +  I+ +        + + 
Sbjct: 57  FTKDKVWPILAPFILVMVILVILPLVSILIYAFIQPADGITLFKISFEKFVKLFTSNGIL 116

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                + L  + A ++ +L  +  A + A+ +    +L   + ++ ++P+   +   V+ 
Sbjct: 117 YSLFLSILYAIVAGMLCVLIGYPIALMMAQMKS--KILARNMWVIVTMPMWISMLLKVLG 174

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              L+       IG  +A I  +    +      +Y SL +   DLEE +     S ++ 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  SMPG++    + +      ++    +  G   +    I SY      +    
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQG-NDFGYG 293

Query: 240 AILYAMLTMLGVIFLY 255
           A +  +L +L    + 
Sbjct: 294 AAVSVVLAILVFGLML 309



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 7/197 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +++   +V  ++  +I  P+ + +            +  +      ++   ++ 
Sbjct: 115 ILYSLFLSILYAIVAGMLCVLIGYPIALMMAQMKSKILARNMWVIVTMPMWISMLLKVLG 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-----ASAFPNDFKEVASSFHITGWRW 493
               +Y L      + + I     Y+              +   D +E A     + +R 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GS 551
           +  I L    P  +T        A  + IV      G I+L +  + +Y  +  +   G+
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQGNDFGYGA 294

Query: 552 FPEVVLGVLIMCCFVLA 568
              VVL +L+    ++ 
Sbjct: 295 AVSVVLAILVFGLMLVM 311


>gi|126737153|ref|ZP_01752888.1| putative sugar uptake ABC transporter permease protein [Roseobacter
           sp. SK209-2-6]
 gi|126721738|gb|EBA18441.1| putative sugar uptake ABC transporter permease protein [Roseobacter
           sp. SK209-2-6]
          Length = 287

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 71/204 (34%), Gaps = 7/204 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGF-LTFTVV 121
           Y   + +  +++ +I++L         A+ R +        L + +++P +   L   +V
Sbjct: 80  YFRNSLIVSVTSTLIAILIGMSGGYAFARYRFKGKNGYFVGLMLFRAVPGVALSLPLFIV 139

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +         +G  LA +       +W            IPR+L E +     + WQ FW
Sbjct: 140 FAKAGIIDTHLGLILAYVAMNVPFTIWL----TDGFFRQIPRELHEAAEIDGCTRWQAFW 195

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P +  G+    + +    W     +  +        +P +G     A    +   +
Sbjct: 196 KVEFPVARSGVASAAIFAFLTSWNEFALASQLTRSVGSKTMP-VGLLDFTAEFTINWGGM 254

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIV 265
               + M+    +   ++ + +I 
Sbjct: 255 CALAVLMIVPALILTFIVQKHLIA 278



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 2/143 (1%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPL 436
           V      ++   V   +IA +I +  G                   L  A P      PL
Sbjct: 77  VFSYFRNSLIVSVTSTLIAILIGMSGGYAFARYRFKGKNGYFVGLMLFRAVPGVALSLPL 136

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       ++ +L L L  +     + ++         P +  E A     T W+ +  
Sbjct: 137 FIVFAKAGIIDTHLGLILAYVAMNVPFTIWLTDGFFRQIPRELHEAAEIDGCTRWQAFWK 196

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           +  P       + AI A   +WN
Sbjct: 197 VEFPVARSGVASAAIFAFLTSWN 219


>gi|167002523|ref|ZP_02268313.1| amine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|243061798|gb|EES43984.1| amine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 584

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 68/171 (39%), Gaps = 20/171 (11%)

Query: 93  SRRLGMVLVPI----LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +RR G   +P+    + I Q+ P +  L   V       P    G +   I  I    + 
Sbjct: 410 TRRAGAEFLPVARSVVHIGQTFPPVAVLALAV-------PAVGFGVKPVLIALILYGLL- 461

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S    L ++P    + +R+  +S  Q+  ++ +P + P ++  + ++       VV
Sbjct: 462 PIFESTIAGLQDVPAGAVDAARAMGMSALQRLAWIELPLAFPVVLNGIRLA-------VV 514

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM-LGVIFLYDQL 258
            +       + +   G+G  I   ++  +   +L   L + L  + +YD L
Sbjct: 515 INLGTATIGSTVAAKGLGDVIIAGLQTSNTAFVLQGGLVVALLAVLIYDAL 565



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P    
Sbjct: 424 VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPAGAV 479

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A +  ++  +   +I LP  FP  + G   A        +++   +     +   GLG
Sbjct: 480 DAARAMGMSALQRLAWIELPLAFPVVLNGIRLA-------VVINLGTATIGSTVAAKGLG 532

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G L++    + +
Sbjct: 533 DVIIAGLQTSNTAFVLQGGLVVALLAVLI 561


>gi|146296623|ref|YP_001180394.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410199|gb|ABP67203.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 284

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 13/165 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF----- 433
           +I    +T+  +++ + I     I +G  +     ++  ++PF +LLA  P+ V+     
Sbjct: 65  IIGSVYVTLGAIIIGVPIGIATAIFLGELV--SEKVARAVRPFVELLAGIPSVVYGFYGL 122

Query: 434 ---FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHIT 489
               PL+         +      +L I       + N+      + P ++KE + +   T
Sbjct: 123 VVIVPLIRKMFGGSGFSVLASSIILGIM--ILPTIINISEVSIRSVPKEYKEGSLALGAT 180

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            W+  + +ILP      +   I   G A   ++   + +     +
Sbjct: 181 HWQTIKGVILPAARSGIIASVILGMGRAIGETMAVIMVAGNSPKI 225



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 62/158 (39%), Gaps = 7/158 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T   ++  + I +        L   S ++   + P ++++  IP + +    L   V   
Sbjct: 72  TLGAIIIGVPIGIATAIFLGELV--SEKVARAVRPFVELLAGIPSVVYGFYGLVVIVPLI 129

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             ++ G       ++I          +  S   S+ ++P++ +E S +   + WQ    +
Sbjct: 130 RKMFGGSGFSVLASSIILGIMILPTIINISE-VSIRSVPKEYKEGSLALGATHWQTIKGV 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +P +  G++ ++++ M       +A  M+      IP
Sbjct: 189 ILPAARSGIIASVILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|313665129|ref|YP_004047000.1| ABC transporter, permease protein [Mycoplasma leachii PG50]
 gi|312949724|gb|ADR24320.1| ABC transporter, permease protein [Mycoplasma leachii PG50]
          Length = 330

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +   +  ++++ I+ ++   I     P D + +  I+ +        + + 
Sbjct: 57  FSKDKVWPILAPFILVMVILVILPLVSILIYAFIQPADGITLFKISFEKFAKLFTSNGIL 116

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                + L  + A ++ +L  +  A + A+ +    +L   + ++ ++P+   +   V+ 
Sbjct: 117 YSLFLSILYAIVAGMLCVLIGYPIALMMAQMKS--KILARNMWVIVTMPMWISMLLKVLG 174

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              L+       IG  +A +  +    +      +Y SL +   DLEE +     S ++ 
Sbjct: 175 LQTLFYLLADFAIGTPIAIVIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  SMPG++    + +      ++    +  G   +    I SY      +    
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQG-NDFGYG 293

Query: 240 AILYAMLTMLGVIFLY 255
           A +  +L +L    + 
Sbjct: 294 AAVSVVLAILVFGLML 309



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 7/197 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +++   +V  ++  +I  P+ + +            +  +      ++   ++ 
Sbjct: 115 ILYSLFLSILYAIVAGMLCVLIGYPIALMMAQMKSKILARNMWVIVTMPMWISMLLKVLG 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-----ASAFPNDFKEVASSFHITGWRW 493
               +Y L      + + I     Y+              +   D +E A     + +R 
Sbjct: 175 LQTLFYLLADFAIGTPIAIVIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GS 551
           +  I L    P  +T        A  + IV      G I+L +  + +Y  +  +   G+
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQGNDFGYGA 294

Query: 552 FPEVVLGVLIMCCFVLA 568
              VVL +L+    ++ 
Sbjct: 295 AVSVVLAILVFGLMLVM 311


>gi|256827252|ref|YP_003151211.1| ABC-type metal ion transporter permease [Cryptobacterium curtum DSM
           15641]
 gi|256583395|gb|ACU94529.1| ABC-type metal ion transport system, permease component
           [Cryptobacterium curtum DSM 15641]
          Length = 225

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTFT 119
           T +  L + + + L       L   +          L  VL  +++I +S+P    L   
Sbjct: 22  TVVMTLVSTLFAYLLGIPLGVLVTLTAPDGLRPHPALSRVLGWLVNIGRSVP-FIILLVA 80

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F     G  +G    AI  +  S    +   + QSL  +   L E ++SF  S WQ 
Sbjct: 81  LIPFTRFIVGTSLGV-PGAIVPLVISAAPFVARMVEQSLREVDSGLVEAAQSFGASTWQI 139

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
            W + +  ++P L+    +++
Sbjct: 140 VWKVYLHEAVPSLIRGASITL 160



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 14/187 (7%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKI 418
           ++  F  Q    ++     T+   +V  + A ++ IP+G+ +           P +S  +
Sbjct: 3   VLTSFFGQYGQLLLVGTRDTVVMTLVSTLFAYLLGIPLGVLVTLTAPDGLRPHPALSRVL 62

Query: 419 QPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
                +  + P         P     +    L     +  L+I    + +   V      
Sbjct: 63  GWLVNIGRSVPFIILLVALIPF-TRFIVGTSLGVPGAIVPLVISAAPF-VARMVEQSLRE 120

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             +   E A SF  + W+    + L    P  + GA          S ++     G +  
Sbjct: 121 VDSGLVEAAQSFGASTWQIVWKVYLHEAVPSLIRGASITLITLLGYSAMAGTVGAGGLGD 180

Query: 535 RTTGLGA 541
                G 
Sbjct: 181 IAIRYGY 187


>gi|94309744|ref|YP_582954.1| binding-protein-dependent transport systems inner membrane
           component [Cupriavidus metallidurans CH34]
 gi|93353596|gb|ABF07685.1| Putative ABC-type transporter, permease component: QAT family
           [Cupriavidus metallidurans CH34]
          Length = 238

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPI 103
             + +  I+     L    +     +  +M ++L          ++    R    ++  I
Sbjct: 24  AWIGVDVISQYQERLFYDVADHLRLVAISMALALATGIPAGIGLSRPCMHRWADRLMQ-I 82

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
            ++  ++P         +  + L    +   E  AI A++ + +  +  + Y+ L N+  
Sbjct: 83  FNVGNTVPS--------LAVLALALAVLGIGERPAILALWLASLLPIVRNTYEGLRNVSP 134

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            L E +R   ++  Q+   + +P ++P ++  + +S+
Sbjct: 135 ALLEAARGIGMTPCQQLIRVELPNALPVILAGVRISL 171



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                GV        + +I      Q    + +     +  V + + +A    IP GI +
Sbjct: 8   AFAWSGVVAVALAGLVAWIGVDVISQYQERLFYDVADHLRLVAISMALALATGIPAGIGL 67

Query: 409 G---FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
                       +Q    +    P+     L ++ +            L +   +   I+
Sbjct: 68  SRPCMHRWADRLMQ-IFNVGNTVPSLAVLALALAVLGIGER----PAILALWLASLLPIV 122

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            N   G         E A    +T  +    + LP   P  + G   + 
Sbjct: 123 RNTYEGLRNVSPALLEAARGIGMTPCQQLIRVELPNALPVILAGVRISL 171


>gi|297559378|ref|YP_003678352.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296843826|gb|ADH65846.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 300

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 83/220 (37%), Gaps = 18/220 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112
           P   D   LP+      L  LS ++I L          A+ + L   ++  ++++ ++P 
Sbjct: 44  PGDPDRGVLPRLTEHMRLSYLS-ILIGLAVALPLGLACARWKPLYPPVLTGVNVLYAVPS 102

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +      + Y           ++  A+  +    +  +  ++   L  +P  + + + + 
Sbjct: 103 IALFFLMLPY--------TGFSDWTAVVPLALYTLVILLPNVVDGLRQVPDHVRQAAVAM 154

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
                ++  Y+ +P ++P ++  + ++       V    M+ V   V         ++  
Sbjct: 155 GFGPLRRLLYVEMPVAVPVVIAGLRVA------SVATISMVSVASLVGLGGLGRLILSEG 208

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269
            + Q    I+  ++  + + F+ D +L    R +  WS +
Sbjct: 209 FRRQFDAPIVVGIVLTVALAFVTDAVLVLAQRLLTPWSRR 248



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 4/124 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + I+I   + +P+G+       +   +     +L A P+   F L++    +      +
Sbjct: 63  YLSILIGLAVALPLGLACARWKPLYPPVLTGVNVLYAVPSIALFFLMLPYTGFSDWTAVV 122

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+L  +      +L NV+ G    P+  ++ A +      R   Y+ +P   P  + G 
Sbjct: 123 PLALYTLVI----LLPNVVDGLRQVPDHVRQAAVAMGFGPLRRLLYVEMPVAVPVVIAGL 178

Query: 511 ITAC 514
             A 
Sbjct: 179 RVAS 182


>gi|254421826|ref|ZP_05035544.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196189315|gb|EDX84279.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 226

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 8/142 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              + ++     L  L  M+ ++L +     L  + R L   ++ +  ++ ++P L    
Sbjct: 25  PDRVLEFLLGHLLITLVTMMFAVLISVPIGILITRVRSLYDPVIKLAGMLYTVPSLAMFG 84

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V  F   +          AI A+    +  +  +    +  +   + E +R   +   
Sbjct: 85  VLVPIFGIGFRP--------AIVALTLYSLLAIIRNTAVGINGVDPAVIESARGMGMRDH 136

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
                L +P +MP +   + ++
Sbjct: 137 AILMQLELPLAMPVIFAGIRIA 158



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 6/166 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            + Y +      D +    LG   +   +V ++ A +I +P+GI I     +   +   A
Sbjct: 14  GLLYYIPGVGRPDRVLEFLLGH--LLITLVTMMFAVLISVPIGILITRVRSLYDPVIKLA 71

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +L   P+   F ++V           + L+L  +      I+ N   G +       E 
Sbjct: 72  GMLYTVPSLAMFGVLVPIFGIGFRPAIVALTLYSLLA----IIRNTAVGINGVDPAVIES 127

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           A    +        + LP   P    G   A     + + ++    
Sbjct: 128 ARGMGMRDHAILMQLELPLAMPVIFAGIRIATVSTISLATLASFFG 173


>gi|152971103|ref|YP_001336212.1| glycine betaine/choline ABC transporter membrane protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|329999095|ref|ZP_08303301.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955952|gb|ABR77982.1| putative glycine/betaine/choline transport protein, osmoprotection
           (ABC superfamily, membrane) [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|328538456|gb|EGF64573.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 245

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 18/246 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++ G+       S  +               L     + VV   + A+ I 
Sbjct: 9   WWLIALFIGLLAGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVASSLAATAIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  G+ +       S  +P  + +AA     P      + V  + +  L   + L+L  I
Sbjct: 69  LGAGVAV--TRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIALALYGI 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  + P     VA    +TGW+    + LP   P  + G  T+    
Sbjct: 127 L----PVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGIRTSVIVN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   +V G L++    + ++R     L
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRAF-ERL 234

Query: 578 YLYGTR 583
             + +R
Sbjct: 235 TRWISR 240



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 20/195 (10%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
                     A +R  G    P+++    I Q+ P +  L   V               L
Sbjct: 64  ATAIGLGAGVAVTRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLG--------FGWL 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +       L +IP  +  V+    ++GWQ+ + + +P + P ++  +
Sbjct: 116 PALIALALYGILPVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             S+         +  +           +G+ I + +   +   I+   L +     + D
Sbjct: 176 RTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGALLVALAAIIVD 228

Query: 257 QLLFRPMIVWSNKFR 271
           +  F  +  W ++ R
Sbjct: 229 RA-FERLTRWISRHR 242


>gi|123966099|ref|YP_001011180.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9515]
 gi|112818722|gb|ABI23484.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9515]
 gi|123200465|gb|ABM72073.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9515]
          Length = 315

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 95/270 (35%), Gaps = 34/270 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++++GII ++     E+     +  +V    +       A       L   ++SLL 
Sbjct: 34  FVAIILLGIILVVFFQSFESFSRYGLQFLVTSEWNPVKDEYGAFTAIYGTLVTSILSLLI 93

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYF--------- 123
           T       A         +    ++   ++++ +IP +    +  F +  F         
Sbjct: 94  TIPLGVGTAIFLTEDFVPKVAREIIGSFVELLAAIPSVVLGLWAIFVIEPFFREFFVFLH 153

Query: 124 -----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
                + L+  +  G        I    +  +  S+   SL  +P+ L   +     S W
Sbjct: 154 NFFGWIPLFSSEPSGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRW 213

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
           +  + + +P ++ G++  +++++       +A  MI+            PG  I S +A 
Sbjct: 214 KTIFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNKFSWSLLSPGYTISSMLAN 273

Query: 232 AIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              E D   + ++ YA   ++ +    +  
Sbjct: 274 QFGEADGSQVSSLFYAAFVLMILSLFVNIF 303



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 89/278 (32%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +    +V       ++   G      +  + +   +     ++  +V  I++ +I I
Sbjct: 36  AIILLGIILVVFFQSFESFSRYGLQFLVTSEWNPVKDEYGAFTAIYGTLVTSILSLLITI 95

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANV---FFPLVV-------------- 438
           P+G+                  I  F +LLAA P+ V   +   V+              
Sbjct: 96  PLGVGTAIFLTEDFVPKVAREIIGSFVELLAAIPSVVLGLWAIFVIEPFFREFFVFLHNF 155

Query: 439 -SCVSYYHLNP---NLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
              +  +   P   N  L++L++      I+ ++     +  P   +  A     + W+ 
Sbjct: 156 FGWIPLFSSEPSGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKT 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEK 549
              +ILP      + G + A G A   ++   +          + L  G  I    + + 
Sbjct: 216 IFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNKFSWSLLSPGYTISSMLANQF 275

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L    FVL +     +    +  +   L
Sbjct: 276 GEADGSQVSSLFYAAFVLMILSLFVNIFAQWLVKKFSL 313


>gi|150377095|ref|YP_001313691.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031642|gb|ABR63758.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 288

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGF-LTFT 119
             Y   + +  +++ VI+L          A+ R +    +     + +++P +   L   
Sbjct: 79  WDYFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLF 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++Y             L  +       +W +          +P+DL E ++    + WQ 
Sbjct: 139 MLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTPWQA 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  I        LP +G     A    D  
Sbjct: 195 FWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLP-VGLLDYTAEFTIDWR 253

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 254 GMCALAVVMIVPALTLTFIIQKHLV 278



 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 3/165 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++   V   +IA  I +  G           S I     L  A P       +    +  
Sbjct: 85  SLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFMLYART 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    +  +L            +I G     P D  E A     T W+ +  +  P   
Sbjct: 145 GIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEFPLAG 204

Query: 504 PYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAEST 547
           P   +  I A   +WN  ++ S++    +      GL  Y AE T
Sbjct: 205 PGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFT 249


>gi|50954889|ref|YP_062177.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
 gi|31616618|gb|AAP55491.1| PROW-like protein [Leifsonia xyli subsp. xyli]
 gi|50951371|gb|AAT89072.1| ABC-type glycine betaine transport, permease protein [Leifsonia
           xyli subsp. xyli str. CTCB07]
          Length = 229

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 12/193 (6%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++  +              +V   L +     +A + R    VL+ I  ++ +IP L   
Sbjct: 7   NLGQVWSLTLSHVWLSAIPIVAGFLLSLPIGWIANRYRMSRPVLLTIGGLLYAIPSLPLF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                + M    G  I + L  + A+    V  M  +   +L ++P ++ + + +   S 
Sbjct: 67  -----FAMPALIGTKILSPLNVVVALSVYAVALMVRTTADALASVPGEVVQSATAVGFSA 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W++FW + +P + P L+  +           V++  +V    ++ +P +G      +   
Sbjct: 122 WRRFWSVELPLAGPVLLAGLR-------VVSVSTVSLVSVGALLGVPNLGQLFTDGLNRS 174

Query: 237 DLLAILYAMLTML 249
               +L  ++ ++
Sbjct: 175 YNDEVLVGIVGIM 187



 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 8/193 (4%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F + ++  V  L    ++   + I+   ++ +P+G            +     LL A P
Sbjct: 2   SFLWPNLGQVWSLTLSHVWLSAIPIVAGFLLSLPIGWIANRYRMSRPVLLTIGGLLYAIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F  + + +    L+P   +  L ++     ++       ++ P +  + A++   +
Sbjct: 62  SLPLFFAMPALIGTKILSPLNVVVALSVYAVA-LMVRTTADALASVPGEVVQSATAVGFS 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            WR +  + LP   P  + G         +   V  +    +       LG    +   +
Sbjct: 121 AWRRFWSVELPLAGPVLLAGLRVVSVSTVSLVSVGALLGVPN-------LGQLFTDGLNR 173

Query: 550 GSFPEVVLGVLIM 562
               EV++G++ +
Sbjct: 174 SYNDEVLVGIVGI 186


>gi|29346732|ref|NP_810235.1| putative ABC transporter permease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338629|gb|AAO76429.1| putative ABC transporter permease protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 291

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 67/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +++  I+  +++          I       +    +      T   M  + + +  
Sbjct: 26  LCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGMTGGGIWPAIVGTFYLMAGSALFAFP 85

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A   +L   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 86  VGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGD--SILAG 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 144 SLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLIL 203

Query: 199 SMS 201
           ++ 
Sbjct: 204 ALG 206



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  G    S  +I +  T       IW   +  F ++     +++   
Sbjct: 28  IVLILFAILGFIIYKGAGAVSWEFITSAPTDGMTGGGIWPAIVGTFYLMAG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G           +   I+     L+  P+ VF  F + +        +  L  S
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGS 144

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|237736375|ref|ZP_04566856.1| phosphate ABC transporter [Fusobacterium mortiferum ATCC 9817]
 gi|229421417|gb|EEO36464.1| phosphate ABC transporter [Fusobacterium mortiferum ATCC 9817]
          Length = 297

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T    L  +++++ F           AK   L  ++   +  +  IP + +  F +  F+
Sbjct: 82  TLWLTLGTIIVAVPFGIFTGVYLVEYAKDNFLTRIINLTIINLAGIPSIIYGLFGMALFV 141

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V     +    I    V  +  +  +SL  IP  L E S +   + W+    + 
Sbjct: 142 IFLGFDVSILSGSLTLGIMCLPV--IITATRESLLAIPNHLREASLALGATKWETITKVI 199

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++  +++S+S  
Sbjct: 200 LPAAMPGILTGVILSISRA 218



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 9/134 (6%)

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
           L +   I+ +P GI+ G           ++  I      LA  P+ ++  F + +  +  
Sbjct: 85  LTLGTIIVAVPFGIFTGVYLVEYAKDNFLTRIINLTIINLAGIPSIIYGLFGMALFVIFL 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L  SL +       I+        A PN  +E + +   T W     +ILP   
Sbjct: 145 GFDVSILSGSLTLGIMCLPVIITATRESLLAIPNHLREASLALGATKWETITKVILPAAM 204

Query: 504 PYYVTGAITACGGA 517
           P  +TG I +   A
Sbjct: 205 PGILTGVILSISRA 218


>gi|218282142|ref|ZP_03488441.1| hypothetical protein EUBIFOR_01023 [Eubacterium biforme DSM 3989]
 gi|218216868|gb|EEC90406.1| hypothetical protein EUBIFOR_01023 [Eubacterium biforme DSM 3989]
          Length = 292

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 64/151 (42%), Gaps = 6/151 (3%)

Query: 74  SAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++I+  F    +        +       P+++I   IP + +    LT  + +   ++
Sbjct: 81  LALLIATPFALGSSIFMTEISPKFGEKFYRPMVEIFAGIPSVVYGWVGLTVLIPFLKKVF 140

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +V  + LAA   +      ++T     ++  + ++    +     + WQ  + + +P 
Sbjct: 141 DLQVGHSILAASLVLSIMIFPSITSVASDAIRAVSKETRMAAYGLGSTRWQTIYRVVIPA 200

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           ++PG++  +++ ++  +   +A  M++   T
Sbjct: 201 ALPGVISGIVLGLARAFGEALAVAMVIGQTT 231



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           + +  +A +I  P    +G                 +P  ++ A  P+ V+  + ++ + 
Sbjct: 76  LCVCGLALLIATP--FALGSSIFMTEISPKFGEKFYRPMVEIFAGIPSVVYGWVGLTVLI 133

Query: 443 YY-------HLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWW 494
            +        +  ++  + L++    +  + +V      A   + +  A     T W+  
Sbjct: 134 PFLKKVFDLQVGHSILAASLVLSIMIFPSITSVASDAIRAVSKETRMAAYGLGSTRWQTI 193

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +++P   P  ++G +     A+  ++   +       L  +
Sbjct: 194 YRVVIPAALPGVISGIVLGLARAFGEALAVAMVIGQTTALPKS 236


>gi|117924838|ref|YP_865455.1| phosphate ABC transporter inner membrane subunit PstA
           [Magnetococcus sp. MC-1]
 gi|117608594|gb|ABK44049.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Magnetococcus sp. MC-1]
          Length = 432

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 56/146 (38%), Gaps = 2/146 (1%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +L        +  L++  + L         A K+     ++   ++ + ++P + F  
Sbjct: 211 LGALVGSGLTLLVTFLASFPVGLATAVYLEEFAPKNGW-TDLIEVNINNLAAVPSIVFGL 269

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+N+       A +     +    +  +  +   +L  +P  L + +R    S  
Sbjct: 270 LGLAVFLNVM-HMPRSAPVVGGLTLALMTLPTIIIATRAALKAVPPSLRDAARGLGASPL 328

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q   +  VP +MPG++   ++ M+  
Sbjct: 329 QVVLHHVVPLAMPGILTGTIIGMAQA 354



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 392 VLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           + +++  +   PVG+               +  I+     LAA P+ VF  L ++     
Sbjct: 219 LTLLVTFLASFPVGLATAVYLEEFAPKNGWTDLIEVNINNLAAVPSIVFGLLGLAVFLNV 278

Query: 445 HLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
              P        L +   T   I+    A   A P   ++ A     +  +   + ++P 
Sbjct: 279 MHMPRSAPVVGGLTLALMTLPTIIIATRAALKAVPPSLRDAARGLGASPLQVVLHHVVPL 338

Query: 502 IFPYYVTGAITACGGA-------WNASIVSEVASWGHIHLRTTGLG----AYIAESTEKG 550
             P  +TG I     A           +V+ +    H       +        A+S E+G
Sbjct: 339 AMPGILTGTIIGMAQALGETAPLLMIGMVAFLVDIPHSATDAATVMPVQIYLWADSAERG 398

Query: 551 SFPEVVLGVLIMCCFVLALNRF 572
              +     L++  F++ +N  
Sbjct: 399 FVEKTAAATLVLLGFLVLMNLL 420


>gi|320106582|ref|YP_004182172.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
 gi|319925103|gb|ADV82178.1| binding-protein-dependent transport systems inner membrane
           component [Terriglobus saanensis SP1PR4]
          Length = 215

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                     A+ +++        L  +   L    + I +I+Q+IP L      +    
Sbjct: 16  TFEHLWLTAWALGLAIAIALPMGILLTRKPILAKPFLGIANILQTIPSLALFGLLLPLPW 75

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  +     AI A+    +  +  + Y ++ NI   L +VS +  +S  QK   + 
Sbjct: 76  LGERASRL-----AIVALTAYALLPILRNTYTAIRNIDPALRDVSNALGMSEMQKLMKVE 130

Query: 185 VPFSMPGLVWNMMMS 199
           +P S   ++  +  +
Sbjct: 131 LPLSASIILAGIRTA 145



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 1/144 (0%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
            F  Q    +  L    ++     + +A  I +P+GI +  +P ++      A +L   P
Sbjct: 3   DFLRQHGSEIARLTFEHLWLTAWALGLAIAIALPMGILLTRKPILAKPFLGIANILQTIP 62

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F L++           L +  L  +     IL N            ++V+++  ++
Sbjct: 63  SLALFGLLLPLPWLGERASRLAIVALTAY-ALLPILRNTYTAIRNIDPALRDVSNALGMS 121

Query: 490 GWRWWRYIILPGIFPYYVTGAITA 513
             +    + LP      + G  TA
Sbjct: 122 EMQKLMKVELPLSASIILAGIRTA 145


>gi|229526296|ref|ZP_04415700.1| phosphate transport system permease protein PstC [Vibrio cholerae
           bv. albensis VL426]
 gi|229336454|gb|EEO01472.1| phosphate transport system permease protein PstC [Vibrio cholerae
           bv. albensis VL426]
          Length = 306

 Score = 59.6 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS----- 66
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 28  KERIFHGLFLTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALFGVATM 87

Query: 67  --RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 88  IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 148 IVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 208 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALFGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|212704968|ref|ZP_03313096.1| hypothetical protein DESPIG_03035 [Desulfovibrio piger ATCC 29098]
 gi|212671632|gb|EEB32115.1| hypothetical protein DESPIG_03035 [Desulfovibrio piger ATCC 29098]
          Length = 295

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 14/211 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F    G+ +      + +++    Y      ++     +   V + +++S++ +
Sbjct: 25  LAGIVIFLFTEGLPLFRHVSPLDFLLGDLWYPTEDPGLFGIFPLLVGSVAVTVLSSLLAV 84

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNP 448
           P+G+           P     I+PF +LLAA P+ V          P++   +       
Sbjct: 85  PLGVMTAVYLAEIAPPFARRIIKPFVELLAALPSVVLGFLGMVVLAPILQDVLGAATGLN 144

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            L  SL++   +   I         A P   +E + +   T W     +++P       T
Sbjct: 145 LLNASLVLAIMSLPTICSVSEDALRAVPRSLREASLALGATRWETIVRVVVPAALSGIGT 204

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             +     A   ++V  +A+ G   L  + L
Sbjct: 205 AIMLGMSRAMGETMVVLMAAGGAAMLPQSLL 235



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 10/159 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-- 122
           ++  V+S L       + A             ++ P ++++ ++P  +LGFL   V+   
Sbjct: 73  VAVTVLSSLLAVPLGVMTAVYLAEIAPPFARRIIKPFVELLAALPSVVLGFLGMVVLAPI 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             ++         L A   +    +  +      +L  +PR L E S +   + W+    
Sbjct: 133 LQDVLGAATGLNLLNASLVLAIMSLPTICSVSEDALRAVPRSLREASLALGATRWETIVR 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP ++ G+   +M+ MS      +   M   G  ++P
Sbjct: 193 VVVPAALSGIGTAIMLGMSRAMGETMVVLMAAGGAAMLP 231


>gi|150006051|ref|YP_001300795.1| putrescine transport system permease protein PotH [Bacteroides
           vulgatus ATCC 8482]
 gi|254881778|ref|ZP_05254488.1| putrescine transport system permease PotH [Bacteroides sp.
           4_3_47FAA]
 gi|294775379|ref|ZP_06740899.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
 gi|319641204|ref|ZP_07995905.1| putrescine transport system permease PotH [Bacteroides sp. 3_1_40A]
 gi|149934475|gb|ABR41173.1| putrescine transport system permease protein PotH [Bacteroides
           vulgatus ATCC 8482]
 gi|254834571|gb|EET14880.1| putrescine transport system permease PotH [Bacteroides sp.
           4_3_47FAA]
 gi|294450780|gb|EFG19260.1| ABC transporter, permease protein [Bacteroides vulgatus PC510]
 gi|317387178|gb|EFV68056.1| putrescine transport system permease PotH [Bacteroides sp. 3_1_40A]
          Length = 265

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 98/259 (37%), Gaps = 10/259 (3%)

Query: 2   FLYNILPPFISRRIFPNIFDLL-AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
            L  I     SR+ +   + +  A  +++ ++ I+++   +      + +         +
Sbjct: 1   MLRTIRFFLSSRKSWTIPYVIFSAVFVILPLLLIVVYAFMDDAGHFTLGNFAKFFAHPEA 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +    +   V+ +L  +  A +  ++R      V +L I+   P+   +    
Sbjct: 61  I-NTFVYSIGVAIITTVVCILLGYPAAYILTQTRMKYASTVVVLFIL---PMWVNILIRT 116

Query: 121 VYFMNLYPG-KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  + L+    V   E A IF +  + +  M + +Y +L  + +   E ++    +  Q 
Sbjct: 117 LATVALFDFMNVSLGEGALIFGMVYNFLPFMIYPIYNTLQKLDKSYVEAAQDLGANPMQV 176

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+   +P SMPG+V  ++M           +E++ + +  +     G+ I   I      
Sbjct: 177 FFKAVLPLSMPGIVSGILMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWN 232

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ML +I     L
Sbjct: 233 YGAALSLIMLFLIGATTLL 251



 Score = 38.0 bits (87), Expect = 4.4,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDVLYVI--WLGCI 385
             ++   + R S+ +    F  V  +   +      ++    HFT  +            
Sbjct: 3   RTIRFFLSSRKSWTIPYVIFSAVFVILPLLLIVVYAFMDDAGHFTLGNFAKFFAHPEAIN 62

Query: 386 TMFRVVVLIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           T    + + II +++ I +G    +I  +  +          +     N+    + +   
Sbjct: 63  TFVYSIGVAIITTVVCILLGYPAAYILTQTRMKYASTVVVLFILPMWVNILIRTLATVAL 122

Query: 443 YYHLNPNLW---LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
           +  +N +L    L   M++    ++++ +          + E A        + +   +L
Sbjct: 123 FDFMNVSLGEGALIFGMVYNFLPFMIYPIYNTLQKLDKSYVEAAQDLGANPMQVFFKAVL 182

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  V+G +       +   ++E+ +  +I L  T +   I  S         ++ +
Sbjct: 183 PLSMPGIVSGILMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIML 242

Query: 560 LIMCCFVLA 568
            ++    L 
Sbjct: 243 FLIGATTLL 251


>gi|70725610|ref|YP_252524.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           haemolyticus JCSC1435]
 gi|68446334|dbj|BAE03918.1| probable glycine betaine/carnitine/choline ABC transporter
           [Staphylococcus haemolyticus JCSC1435]
          Length = 228

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 80/209 (38%), Gaps = 15/209 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           TL+   L +   +  L  +  ++ + +       L ++  +L   ++ I +I+Q++P + 
Sbjct: 14  TLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILISRYTKLSWPIITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +FA+F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLALGLG--------PNTVVFAVFLYALLPIIKNTYTGITEVDYNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P S+  ++  + ++       +V +  IV   + I    +G  I     
Sbjct: 126 TKNQVMRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGASTLGDIIIRGTN 178

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             D    + A    + +I +   L  R +
Sbjct: 179 STDGTVYILAGAIPIALIAIIIDLGLRLL 207



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 4/108 (3%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A ++   PA     +++  +          +   +       I+ N   G +    + K
Sbjct: 62  IANIIQTVPAIAMLAILMLALGLGPNT----VVFAVFLYALLPIIKNTYTGITEVDYNIK 117

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           +      +T  +  R I LP      + G   A   A     +     
Sbjct: 118 DAGKGMGMTKNQVMRMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|331089878|ref|ZP_08338771.1| hypothetical protein HMPREF1025_02354 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330403575|gb|EGG83133.1| hypothetical protein HMPREF1025_02354 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 217

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+A V + +   +     ++ ++    ++ I +I  +IP +  L   +            
Sbjct: 30  LTAAVSAGIIGLLLGIFISEHKKAAGPVLTIANIGYTIPAISLLGMLIPVLGIG------ 83

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +  AI A+    +  M  + Y  +  +  ++   +     + +Q    + +P +   +
Sbjct: 84  --DKTAITALTIYGIMPMVRNTYAGITGVGEEVVAAAEGMGSTRFQIMTKIKLPLAAGVI 141

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          VV +  +    + I   G+G  I   I   D          +  + 
Sbjct: 142 IAGVR-------NMVVMTISVSAIASFIGAGGLGVAIYRGITIYDSAMTFCGSFLIALLA 194

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 195 IVSDLLL 201



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   + A II + +GI+I      +  +   A +    PA     +++  +         
Sbjct: 30  LTAAVSAGIIGLLLGIFISEHKKAAGPVLTIANIGYTIPAISLLGMLIPVLGIGDKTAIT 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  I      ++ N  AG +    +    A     T ++    I LP      + G 
Sbjct: 90  ALTIYGIM----PMVRNTYAGITGVGEEVVAAAEGMGSTRFQIMTKIKLPLAAGVIIAGV 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N  +++   S     +   GLG  I              G  ++    +  +
Sbjct: 146 R-------NMVVMTISVSAIASFIGAGGLGVAIYRGITIYDSAMTFCGSFLIALLAIVSD 198

Query: 571 RFL 573
             L
Sbjct: 199 LLL 201


>gi|262040140|ref|ZP_06013393.1| ABC superfamily ATP binding cassette transporter permease protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259042493|gb|EEW43511.1| ABC superfamily ATP binding cassette transporter permease protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 245

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 17/236 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++ G+       S  +               L     + VV   + A+ I 
Sbjct: 9   WWLIALFIGLLAGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVASSLAATAIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  G+ +          +P  + +AA     P      + V  + +  L   + L+L  I
Sbjct: 69  LGAGVAV--TRPAGGAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIALALYGI 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  + P     VA    +TGW+    + LP   P  + G  T+    
Sbjct: 127 L----PVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGIRTSVIVN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + ++         +  + LG  I       +   +V G L++    + ++R  
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRAF 231



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 20/195 (10%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
                     A +R  G    P+++    I Q+ P +  L   V               L
Sbjct: 64  ATAIGLGAGVAVTRPAGGAFRPLVETIAAIGQTFPPVAVLAMAVPVLG--------FGWL 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +       L +IP  +  V+    ++GWQ+ + + +P + P ++  +
Sbjct: 116 PALIALALYGILPVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             S+         +  +           +G+ I + +   +   I+   L +     + D
Sbjct: 176 RTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGALLVALAAIIVD 228

Query: 257 QLLFRPMIVWSNKFR 271
           +  F  +  W ++ R
Sbjct: 229 RA-FERLNRWISRHR 242


>gi|153940430|ref|YP_001391822.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum F str. Langeland]
 gi|152936326|gb|ABS41824.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum F str. Langeland]
 gi|295319847|gb|ADG00225.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum F str. 230613]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   + A+++S   +   A        +    +L P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKILKPALELFVGIPSVVYGWLGISILLP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G    + LA I  +    +  +      ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYGGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISN 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKILKPALELFVGIPSVVYGWLGISILLPIIKRIYGGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|319891332|ref|YP_004148207.1| Methionine ABC transporter permease protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161028|gb|ADV04571.1| Methionine ABC transporter permease protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323465514|gb|ADX77667.1| ABC transporter, permease protein [Staphylococcus pseudintermedius
           ED99]
          Length = 219

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDI 106
           ++D   L +   +T   +  +++   L       +   +R         +  +L P+++I
Sbjct: 5   SIDSAQLLEALYQTLYMVTISLIFGALIGVPLGIVLVATRQNGIWPNAWIHHILNPVINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   ++ F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSVP-FIILLIAIIPFTKLIVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E + +   +  Q   Y  +P ++  L+ ++  ++ G
Sbjct: 123 EAAHAMGATPIQIIRYFLLPEALGSLILSLTTAIIG 158



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLA 426
           D   ++     T++ V + +I  ++I +P+GI +             I   + P   +L 
Sbjct: 7   DSAQLLEALYQTLYMVTISLIFGALIGVPLGIVLVATRQNGIWPNAWIHHILNPVINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SVPFIILL-IAIIPFTKLIVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   T  +  RY +LP      +    TA  G
Sbjct: 126 HAMGATPIQIIRYFLLPEALGSLILSLTTAIIG 158


>gi|312973622|ref|ZP_07787794.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 1827-70]
 gi|310332217|gb|EFP99452.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 1827-70]
 gi|323161795|gb|EFZ47675.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli E128010]
 gi|323176977|gb|EFZ62567.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli 1180]
          Length = 240

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 6   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 65

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 66  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 123

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 124 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 179

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 180 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 232

Query: 578 YLYGT 582
                
Sbjct: 233 QALSQ 237



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 47  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 107 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 158

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 159 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 211

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 212 QGALLVALAAIIADRLFERLVQALSQ 237


>gi|183980070|ref|YP_001848361.1| ABC transporter permease [Mycobacterium marinum M]
 gi|183173396|gb|ACC38506.1| ABC transporter permease [Mycobacterium marinum M]
          Length = 222

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   A +    +   ++++     +   L   S         +  +  +IP    L 
Sbjct: 18  WSVLWFLAYQHISLVGQTLILATAIALILGVLIYNSPLGVAAGNAVTAVGLTIPSYALLG 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V        G V    L ++  +    V+ +  ++   L  + + L E +R   +S  
Sbjct: 78  VLV--------GIVGLGVLPSVIMLTFFGVFPILRNVVVGLTGVDKGLVESARGMGMSRL 129

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                L +P + P ++  + +S +     + A     +G      PG+G YI   I    
Sbjct: 130 TTLVRLELPLAWPVIMTGVRVS-AQMLMGIAAIVAFALG------PGLGGYIFSGISRMG 182

Query: 238 ----LLAILYAMLTMLGVIFLYDQLL 259
                 +I+ A + +L +  + D +L
Sbjct: 183 GANATNSIVAATIGILILAVILDTVL 208



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              + +L    +  V   +I+A+ I + +G+ I   P   +       +    P+     
Sbjct: 18  WSVLWFLAYQHISLVGQTLILATAIALILGVLIYNSPLGVAAGNAVTAVGLTIPSYALLG 77

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++V  V    L   + L+   +F     IL NV+ G +       E A    ++      
Sbjct: 78  VLVGIVGLGVLPSVIMLTFFGVF----PILRNVVVGLTGVDKGLVESARGMGMSRLTTLV 133

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP  +P  +TG   +   A     ++ + ++         + + I+      +   +
Sbjct: 134 RLELPLAWPVIMTGVRVS---AQMLMGIAAIVAFALGPGLGGYIFSGISRMGGANATNSI 190

Query: 556 VLGVLIMCCFVLALNRFL 573
           V   + +    + L+  L
Sbjct: 191 VAATIGILILAVILDTVL 208


>gi|311030801|ref|ZP_07708891.1| phosphate ABC transporter (permease) [Bacillus sp. m3-13]
          Length = 313

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
               + + VI++        ++A       S R+  +L PIL+++  IP + +  F   +
Sbjct: 90  LTGTIISSVIAMAVAIPIGLMSAVYLSEYASDRVRRILKPILEVLAGIPTIVYGFFAFTF 149

Query: 123 FMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQ 178
              +    + G E   I     +    +  M  S+   ++ ++P  + E + +   +  +
Sbjct: 150 VTPILRAIIPGLEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNAMREGALALGSTKLE 209

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
             W + VP +M G+V + ++++S  
Sbjct: 210 VAWKVVVPAAMSGIVASFVLAISRA 234



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 24/208 (11%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF------- 433
           +   ++  +IA  + IP+G+             +   ++P  ++LA  P  V+       
Sbjct: 90  LTGTIISSVIAMAVAIPIGLMSAVYLSEYASDRVRRILKPILEVLAGIPTIVYGFFAFTF 149

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++ + +        L   ++M       +        S+ PN  +E A +   T   
Sbjct: 150 VTPILRAIIPGLEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNAMREGALALGSTKLE 209

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAES 546
               +++P      V   + A   A   +++  +AS         I      + AYI E 
Sbjct: 210 VAWKVVVPAAMSGIVASFVLAISRAIGETMIVTIASGSTKNFTFDITQSMQTMTAYIVEV 269

Query: 547 TE----KGSFPEVVLGVLIMCCFVLALN 570
           T      GS     L  + M  FV  L 
Sbjct: 270 TGGDAPAGSTLYYSLYAVAMTLFVFTLI 297


>gi|238895690|ref|YP_002920425.1| putative ABC-type proline/glycine betaine transport system inner
           membrane component [Klebsiella pneumoniae NTUH-K2044]
 gi|238548007|dbj|BAH64358.1| putative ABC-type proline/glycine betaine transport system inner
           membrane component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 245

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 83/246 (33%), Gaps = 18/246 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++ G+       S  +               L     + VV   + A+ I 
Sbjct: 9   WWLIALFIGLLAGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVASSLAATAIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  G+ +          +P  + +AA     P      + V  + +  L   + L+L  I
Sbjct: 69  LGAGVAV--TRPAGGAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIALALYGI 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  + P     VA    +TGW+    + LP   P  + G  T+    
Sbjct: 127 L----PVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGIRTSVIVN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   +V G L++    + ++R     L
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRAF-ERL 234

Query: 578 YLYGTR 583
             + +R
Sbjct: 235 TRWISR 240



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 20/195 (10%)

Query: 81  LFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
                     A +R  G    P+++    I Q+ P +  L   V               L
Sbjct: 64  ATAIGLGAGVAVTRPAGGAFRPLVETIAAIGQTFPPVAVLAMAVPVLG--------FGWL 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +       L +IP  +  V+    ++GWQ+ + + +P + P ++  +
Sbjct: 116 PALIALALYGILPVLQGTLAGLGSIPPGVSGVAEGMGMTGWQRLYKVELPLAAPVILAGI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             S+         +  +           +G+ I + +   +   I+   L +     + D
Sbjct: 176 RTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGALLVALAAIIVD 228

Query: 257 QLLFRPMIVWSNKFR 271
           +  F  +  W ++ R
Sbjct: 229 RA-FERLTRWISRHR 242


>gi|226308393|ref|YP_002768353.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229488398|ref|ZP_04382264.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
 gi|226187510|dbj|BAH35614.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229323902|gb|EEN89657.1| binding-protein-dependent transport systems inner membrane
           component [Rhodococcus erythropolis SK121]
          Length = 272

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 16/230 (6%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           I+ IL+ G+      RD+      ++++ ++     +  L   + ++I +       TL 
Sbjct: 43  IVLILVAGVLIWAFSRDLNATQKASINLDNIVTLTWQHVLITAAVVIIVVAIAVPLGTLL 102

Query: 91  AKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            + +  RL    V I +I  + P +G L    +                 +F I    + 
Sbjct: 103 TRPKFTRLAPFFVGIANIGAAAPAIGLLVLFYLA-------TRTTGFWIGVFPIAFYSLL 155

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +       + + L +  R   +S       L  P ++P ++  +  S+        
Sbjct: 156 PVLRNTILGYQQVDKTLIDAGRGQGMSSLTVLRQLEFPMAVPYILAGLRTSLVLAVGTAT 215

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
              ++  G       G+G  I    K +D + ++   +  + +  L D L
Sbjct: 216 LCFLVSAG-------GLGILIDTGYKLRDNVTLVVGAVLAVSLALLIDWL 258



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 12/170 (7%)

Query: 403 PVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
           P+G  +       ++      A + AA PA     L+V                 + F +
Sbjct: 97  PLGTLLTRPKFTRLAPFFVGIANIGAAAPAIG---LLVLFYLATRTTGFWIGVFPIAFYS 153

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +L N I G         +      ++     R +  P   PY + G  T+   A   
Sbjct: 154 LLPVLRNTILGYQQVDKTLIDAGRGQGMSSLTVLRQLEFPMAVPYILAGLRTSLVLAVGT 213

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           + +  + S G       GLG  I    +      +V+G ++     L ++
Sbjct: 214 ATLCFLVSAG-------GLGILIDTGYKLRDNVTLVVGAVLAVSLALLID 256


>gi|254420029|ref|ZP_05033753.1| phosphate ABC transporter, permease protein PstA [Brevundimonas sp.
           BAL3]
 gi|196186206|gb|EDX81182.1| phosphate ABC transporter, permease protein PstA [Brevundimonas sp.
           BAL3]
          Length = 434

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 70/199 (35%), Gaps = 18/199 (9%)

Query: 74  SAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
             ++++ L        AA          +L  ++   ++ + ++P + +    +  F+N 
Sbjct: 221 LMLMVTALIAIPLGVGAAVWLEEFAPKNKLTDIIEVNINNLAAVPSIVYGLLGLALFINW 280

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                    +  +     + +  +  +   +L  +P  + E + +   S  Q  +   +P
Sbjct: 281 MHLPRASPIVGGLVLALMA-LPTLVIATRSALKAVPPSIREAALAMGASKTQTVFSHVLP 339

Query: 187 FSMPGLVWNMMMSMSGGW-----FFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQ 236
            +MPG++   ++SM+          ++     V G        +G+     YI     E+
Sbjct: 340 LAMPGVMTGAIISMAHALGETAPLLLIGMVSFVPGVPHAIDQPVGALPSLIYIWENASER 399

Query: 237 DLLAILYAMLTMLGVIFLY 255
                  A + +L V  + 
Sbjct: 400 AFHERTAAAIIVLLVFMII 418



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 27/204 (13%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSK-----IQPFAQL----LAAFPANVF----FPLV 437
            +++++ ++I IP+G+  G    +        +    ++    LAA P+ V+      L 
Sbjct: 220 ALMLMVTALIAIPLGV--GAAVWLEEFAPKNKLTDIIEVNINNLAAVPSIVYGLLGLALF 277

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           ++ +     +P +   +L +      ++    +   A P   +E A +   +  +     
Sbjct: 278 INWMHLPRASPIVGGLVLALM-ALPTLVIATRSALKAVPPSIREAALAMGASKTQTVFSH 336

Query: 498 ILPGIFPYYVTGAITACGGAWN-----ASIVSEVASWGHIHLRTTGLGA-----YIA-ES 546
           +LP   P  +TGAI +   A         I       G  H     +GA     YI   +
Sbjct: 337 VLPLAMPGVMTGAIISMAHALGETAPLLLIGMVSFVPGVPHAIDQPVGALPSLIYIWENA 396

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
           +E+         ++++  F++ +N
Sbjct: 397 SERAFHERTAAAIIVLLVFMIIMN 420


>gi|319784949|ref|YP_004144425.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170837|gb|ADV14375.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 288

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFT 119
            +Y   + +  +++ VI++          A+ R  G   V + L + +++P +   L   
Sbjct: 79  IEYFRNSLIISVTSTVIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLF 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +Y          G  LA +       +W +          +P+DL E ++    + WQ 
Sbjct: 139 FLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQA 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +    +   LP +G     A    D  
Sbjct: 195 FWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLP-VGLLDYTAEFTIDWR 253

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 254 GMCALAVVMIIPALTLTYIVQKHLV 278



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 61/196 (31%), Gaps = 7/196 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSY 443
           ++   V   +IA  I +  G                  +L    P      PL    V  
Sbjct: 85  SLIISVTSTVIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRL 144

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             ++ +  L +L            +I G     P D  E A     T W+ +  +  P  
Sbjct: 145 GIIDTHFGL-ILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLA 203

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P   + AI A    WN  ++ S++           GL  Y AE T    +  +    ++
Sbjct: 204 GPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFT--IDWRGMCALAVV 261

Query: 562 MCCFVLALNRFLWHPL 577
           M    L L   +   L
Sbjct: 262 MIIPALTLTYIVQKHL 277


>gi|317054133|ref|YP_004118158.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952128|gb|ADU71602.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 587

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 78/525 (14%), Positives = 162/525 (30%), Gaps = 45/525 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPI--------LDIMQSI 110
              T +  L   +  LL  +  A   A      + R + ++L+P            M  +
Sbjct: 74  TLNTFIIALQTTLTCLLIGYPVAYWLAQRSENARRRLMWLILLPFWTSALLKNFAWMVLL 133

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
              G L+  ++      P  V+      +FA+  S +     +M  ++ N+   L   + 
Sbjct: 134 SRRGILSEILMGLGADQPLNVLYTRGVVVFAMVHSMLPLAIITMLPTMTNVDSRLLPAAH 193

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S    FW +  P SMPGLV   ++   G   F +   ++      +    IG  + 
Sbjct: 194 TLGASRVNAFWRIFFPLSMPGLVAACLLIFIGSLGFFITPALLGSPQDSV----IGQLLI 249

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR 290
             +++     +  A+  ML V+ L           +   F +   TG     S       
Sbjct: 250 TQVQQLLNWRLAGAIAMMLLVVTLVVCF------CYDKLFGMSSITGGEGHAS------- 296

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
            +  +R +GY+     + ++     + R L  +       +L    +  V  +L +    
Sbjct: 297 -SPRVRALGYA---LIAVVARLFDGVARVLYRLPGKPRFGWLLTLFSGLVIAVLVLPVVS 352

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQD--VLYVIWLGCI--TMFRVVVLIIIASIIWIPVGI 406
            +       ++           +    +   IW+G    +    +V  ++A +I      
Sbjct: 353 FLPMAFSSSSFLQFPPPGFSLRWMQTYLASPIWMGATARSFGIALVTGVLAVLIATTAAF 412

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            +      S  +     LL     N+     L     +   +  +L + L         +
Sbjct: 413 GLARHQGKSGSLVVMTFLLPMIVPNIVTAVALFYLFATLGLVGSDLGIILGHTVMAIPVV 472

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
              ++     +     + A +      R    I LP I    V   I     ++    V+
Sbjct: 473 FIIILTTFKHYDWRLDQAAGTLGANRLRVIWCITLPLIKSSMVAAFIFGFLNSFEELTVA 532

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G        L   + +       P +    +++   V  L
Sbjct: 533 LFVGGGVKQT----LPKQMWDDVLLSVTPTLAAASVLILTVVTLL 573


>gi|218554694|ref|YP_002387607.1| putative ABC transporter permease [Escherichia coli IAI1]
 gi|218361462|emb|CAQ99051.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI1]
          Length = 243

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESYAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|330951245|gb|EGH51505.1| D-methionine ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 214

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARVAEVSLREVDHGLIEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          V         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARVAEVSLREVDHGLIEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|312622595|ref|YP_004024208.1| phosphate ABC transporter inner membrane subunit PstC
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203062|gb|ADQ46389.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 284

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ IF F     +       +               +  +   +++  +  III   I I
Sbjct: 25  LITIFIFKEGFAIIKEYGLWNFILGKKWAPLSGKFGIFPMILGSIYVTLGAIIIGVPIGI 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  I+PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVNEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLIRKYLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +  +
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKIPNS 228



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 65/157 (41%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           T   ++  + I +        L   + ++  ++ P ++++  IP +  GF    VV  + 
Sbjct: 72  TLGAIIIGVPIGIATAIFLGELV--NEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G  + A   I    +     ++ + S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKYLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  G++ ++++ M       +A  M+      IP
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|237709801|ref|ZP_04540282.1| putrescine transport system permease PotH [Bacteroides sp.
           9_1_42FAA]
 gi|237725631|ref|ZP_04556112.1| putrescine transport system permease PotH [Bacteroides sp. D4]
 gi|265753456|ref|ZP_06088811.1| putrescine transport system permease PotH [Bacteroides sp.
           3_1_33FAA]
 gi|229436318|gb|EEO46395.1| putrescine transport system permease PotH [Bacteroides dorei
           5_1_36/D4]
 gi|229455894|gb|EEO61615.1| putrescine transport system permease PotH [Bacteroides sp.
           9_1_42FAA]
 gi|263235170|gb|EEZ20694.1| putrescine transport system permease PotH [Bacteroides sp.
           3_1_33FAA]
          Length = 265

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 98/259 (37%), Gaps = 10/259 (3%)

Query: 2   FLYNILPPFISRRIFPNIFDLL-AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
            L  I     SR+ +   + +  A  +++ ++ I+++   +      + +         +
Sbjct: 1   MLRTIRFFLSSRKSWTIPYVIFSAVFVILPLLLIVVYAFMDDAGYFTLGNFAKFFAHPEA 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +    +   V+ +L  +  A +  ++R      V +L I+   P+   +    
Sbjct: 61  I-NTFVYSIGVAIITTVVCILLGYPAAYILTQTRMKYASTVVVLFIL---PMWVNILIRT 116

Query: 121 VYFMNLYPG-KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  + L+    V   E A IF +  + +  M + +Y +L  + +   E ++    +  Q 
Sbjct: 117 LATVALFDFMNVPLGEGALIFGMVYNFLPFMIYPIYNTLQKLDKSYVEAAQDLGANPMQV 176

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F+   +P SMPG+V  ++M           +E++ + +  +     G+ I   I      
Sbjct: 177 FFKAVLPLSMPGIVSGILMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWN 232

Query: 240 AILYAMLTMLGVIFLYDQL 258
                 L ML +I     L
Sbjct: 233 YGAALSLIMLFLIGATTLL 251


>gi|256383996|gb|ACU78566.1| spermidine/putrescine ABC transporter, permease protein [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|256384828|gb|ACU79397.1| spermidine/putrescine ABC transporter, permease protein [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|296455901|gb|ADH22136.1| spermidine/putrescine ABC transporter, permease protein [synthetic
           Mycoplasma mycoides JCVI-syn1.0]
          Length = 330

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +   +  ++++ I+ ++   I     P D + +  I+ +        + + 
Sbjct: 57  FTKDKVWPILAPFILVMVILVILPLVSILIYAFIQPADGITLFKISFEKFVKLFTSNGIL 116

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                + L  + A ++ +L  +  A + A+ +    +L   + ++ ++P+   +   V+ 
Sbjct: 117 YSLFLSILYAIVAGMLCVLIGYPIALMMAQMKS--KILARNMWVIVTMPMWISMLLKVLG 174

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              L+       IG  +A I  +    +      +Y SL +   DLEE +     S ++ 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  SMPG++    + +      ++    +  G   +    I SY      +    
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQG-NDFGYG 293

Query: 240 AILYAMLTMLGVIFLY 255
           A +  +L +L    + 
Sbjct: 294 AAVSVVLAILVFGLML 309



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 7/197 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +++   +V  ++  +I  P+ + +            +  +      ++   ++ 
Sbjct: 115 ILYSLFLSILYAIVAGMLCVLIGYPIALMMAQMKSKILARNMWVIVTMPMWISMLLKVLG 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-----ASAFPNDFKEVASSFHITGWRW 493
               +Y L      + + I     Y+              +   D +E A     + +R 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GS 551
           +  I L    P  +T        A  + IV      G I+L +  + +Y  +  +   G+
Sbjct: 235 FWSITLRSSMPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQGNDFGYGA 294

Query: 552 FPEVVLGVLIMCCFVLA 568
              VVL +L+    ++ 
Sbjct: 295 AVSVVLAILVFGLMLVM 311


>gi|33600438|ref|NP_887998.1| ABC transporter permease [Bordetella bronchiseptica RB50]
 gi|33568037|emb|CAE31950.1| probable permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
          Length = 569

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/514 (14%), Positives = 157/514 (30%), Gaps = 63/514 (12%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIG 133
           + +++ L     A    +    G +L+  L ++  I P         + F       ++ 
Sbjct: 75  SSLLASLIAVPLAYFTVRFEFRGALLIQTLGVLPLIMPPFVGAVAMQLIFGRSGSVNLLL 134

Query: 134 AEL------------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +               IF         +  ++  +L NI   +EE + +    G++ F 
Sbjct: 135 DDWLGITLPFMDGLNGVIFVESLHYFPFILMNLVVALRNIDGSMEEAAFNLGSRGFRLFC 194

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++PG +     S+     F      +V+G T +  P   +Y+ +     +    
Sbjct: 195 RIIFPLALPGYLAG--TSLVFVKVFDDLGTPLVLGTTNMLAP--QAYLRITQVGLEDPLG 250

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
               + M+G   L   L  R +     K       G        L          +IG  
Sbjct: 251 YVISVIMIGFSILALWLSARVL---KGKDYSTLQKGGNAIHKRRLRPVESVLAYAWIGAV 307

Query: 302 SWNFFSP----LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                SP    L  ++  +     +   +   ++  + +  +      + +  +  GV +
Sbjct: 308 LLLVLSPHLGVLLLSLASVWSYAPLPDGYTLAHYTAVFTESQGMIANTLLYCGLAAGVDV 367

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISS 416
            +       ++                    R  +  I ++ + IP + + IG+      
Sbjct: 368 VLGTAIAYLMLRTRLPA--------------RQWLDFIASAALAIPGIVLAIGYLRTFRG 413

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASA 474
              P                         L  + W+ +++ +      Y L + +A    
Sbjct: 414 VEIP---------------------GTGVLLTSSWVLIMIAYSVRRLPYALRSCVAALQQ 452

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +E A S   +  R  R I++P +    + G +T+   A      + +        
Sbjct: 453 INVSLEEAAESLGASRLRTIRRIVVPLMAGGMLAGFVTSFITAAVELSATIMLVTRDSQA 512

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             +  G Y+   +  G  P   LGVL +    + 
Sbjct: 513 PMS-YGIYLYMQSAAGRGPGAALGVLAVVAVGIG 545


>gi|295108983|emb|CBL22936.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Ruminococcus obeum A2-162]
          Length = 301

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 73/188 (38%), Gaps = 16/188 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F +++ ++  +L        P D+  +   + +V  +P     + +       +SL+
Sbjct: 48  IVTFAVLLFLVAYILVKGIPYLTP-DLFSLEYTSDNVSLMP-----SLINTFIMTALSLV 101

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                   AA        K  +L  V+    + +  IP + +  F +++F+      +  
Sbjct: 102 IAAPLGIFAAIYLVEYAKKGNKLVQVIRITAETLSGIPSIVYGLFGMLFFVTALHWGMSL 161

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              A    I    +  +  +  ++L  +P    E S        +  + + +P ++PG++
Sbjct: 162 LAGACTLVIMVLPL--IMRTAEEALKAVPDSYREASFGLGAGKLRTIFTIVLPSAVPGIL 219

Query: 194 WNMMMSMS 201
             +++++ 
Sbjct: 220 AGIILAIG 227



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 96/287 (33%), Gaps = 22/287 (7%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
              P   ++KK  +T    R               ++    I  F V+  +   I  + I
Sbjct: 7   VVEPTVEHMKKRNQTSTADRIRSYLRHPGSGVLALLTIGAAIVTFAVLLFLVAYILVKGI 66

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISS 416
            Y+       +          ++    ++  ++ +I  P+GI+              +  
Sbjct: 67  PYLTPDLFSLEYTSDNVSLMPSLINTFIMTALSLVIAAPLGIFAAIYLVEYAKKGNKLVQ 126

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----G 471
            I+  A+ L+  P+ V+    +  + ++    +  +SLL    T   ++  +I       
Sbjct: 127 VIRITAETLSGIPSIVY---GLFGMLFFVTALHWGMSLLAGACTLVIMVLPLIMRTAEEA 183

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P+ ++E +        R    I+LP   P  + G I A G     +      S   
Sbjct: 184 LKAVPDSYREASFGLGAGKLRTIFTIVLPSAVPGILAGIILAIGRIIGETAALLYTSGTV 243

Query: 532 IHLRT-TGLGAYIA-----ESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             +    G G  +A      S+E     +     +++  FVL +N  
Sbjct: 244 AQVPNLMGSGRTLALHMYVLSSEGFHMNQASATAVVILLFVLLINSL 290


>gi|260175247|ref|ZP_05761659.1| putrescine transport system permease protein potH [Bacteroides sp.
           D2]
 gi|299149313|ref|ZP_07042373.1| putrescine transport system permease protein PotH [Bacteroides sp.
           3_1_23]
 gi|298512747|gb|EFI36636.1| putrescine transport system permease protein PotH [Bacteroides sp.
           3_1_23]
          Length = 258

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  ++I +  I+++   + +    + +         ++      +    +   ++ +L  
Sbjct: 16  AIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTLVCILLG 74

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +  A + + S+      + +L I+   + IL     TV  F       V   E A IF +
Sbjct: 75  YPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGM 131

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM    
Sbjct: 132 VYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFLKAVLPLSMPGVMSGIMMVFMP 191

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 192 TISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 243



 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  +     I   +      H T  +            T    + 
Sbjct: 2   SSRKSWTLPYIIFSAIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAINTFVYSIG 61

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II +++ I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 62  IAIITTLVCILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 121

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 122 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFLKAVLPLSMPGV 181

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 182 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 237

Query: 567 LALNRF 572
            A + F
Sbjct: 238 AATSLF 243


>gi|170760755|ref|YP_001787841.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407744|gb|ACA56155.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 66/159 (41%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +     +  G  + A   + +  +     S+   ++  +PR   + S     + WQ    
Sbjct: 151 IIKRIYEGTGFSILAGIIVLSIMILPTIASISVDAIKVVPRSYLQASYGLGATRWQTISK 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDTDVPKFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYEGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPRSYLQASYGLGATRWQTISKVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|168182602|ref|ZP_02617266.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum Bf]
 gi|237795964|ref|YP_002863516.1| phosphate ABC transporter permease PstC [Clostridium botulinum Ba4
           str. 657]
 gi|182674253|gb|EDT86214.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum Bf]
 gi|229262804|gb|ACQ53837.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum Ba4 str. 657]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 66/159 (41%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +     +  G  + A   + +  +     S+   ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYEGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISK 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDTDVPKFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYEGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISKVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|332288730|ref|YP_004419582.1| DL-methionine transporter permease subunit [Gallibacterium anatis
           UMN179]
 gi|330431626|gb|AEC16685.1| DL-methionine transporter permease subunit [Gallibacterium anatis
           UMN179]
          Length = 221

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T   + ++   S +F      +          +++ L + L  I++I +SIP    L
Sbjct: 17  TLETLYMVFASGFFSAVFGIPLGVILFITRPGQIKENKSLNLALSAIVNIGRSIP-FVIL 75

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  IG   AAI  +  S +  M   +  +L  IP  L E +R+   + 
Sbjct: 76  LVAIIPFTMLILGTFIGTT-AAIVPLTISAIPFMARLVEGALMEIPSGLTEAARAMGANN 134

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
            Q      +P ++P ++ ++ +++
Sbjct: 135 LQIITKFLLPEALPSIINSLTITL 158



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 66/226 (29%), Gaps = 29/226 (12%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFA 422
            T Q    +      T++ V      +++  IP+G+         I     ++  +    
Sbjct: 5   LTPQVWTLIGNATLETLYMVFASGFFSAVFGIPLGVILFITRPGQIKENKSLNLALSAIV 64

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI--------AGASA 474
            +  +       P V+  V+       +  + +        +  + I             
Sbjct: 65  NIGRSI------PFVILLVAIIPFTMLILGTFIGTTAAIVPLTISAIPFMARLVEGALME 118

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P+   E A +      +     +LP   P  +           N S ++     G +  
Sbjct: 119 IPSGLTEAARAMGANNLQIITKFLLPEALPSIINSLTITLVSLVNYSAMAGTVGGGGLGY 178

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580
                G        +   PE+++  +++   ++ L + +   L  Y
Sbjct: 179 VGIQYGY-------QTYVPEILVATIVILVIMVQLIQTIGDHLVRY 217


>gi|194431492|ref|ZP_03063784.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|194420317|gb|EDX36394.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Shigella dysenteriae 1012]
 gi|332092661|gb|EGI97732.1| inner membrane ABC transporter permease protein yehW [Shigella
           dysenteriae 155-74]
          Length = 243

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +          +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFVALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|325978472|ref|YP_004288188.1| putative proline/glycine betaine ABC transporter permease
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178400|emb|CBZ48444.1| putative proline/glycine betaine ABC transporter, permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 208

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 75/187 (40%), Gaps = 19/187 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++ +LLF  V   +     ++    V +L ++ +IP     T  +       P   +G 
Sbjct: 26  SLLFALLFASVITVILLFYPKIRQASVYVLSLLYAIPSFALFTLLI-------PVTGLGT 78

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I  +  +Q + +  +    L  +   + E +    ++ WQ    + +P +   +  
Sbjct: 79  RTAIIALVIYAQ-YTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILSKIQLPLAQSSIFA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + ++         AS MI +    + I   G+GS +   ++   L  +L+ ++  + + 
Sbjct: 138 GLRLA---------ASSMIAIATIASTINAGGLGSILFDGLRTMSLPKLLWGIILTVALS 188

Query: 253 FLYDQLL 259
            L + +L
Sbjct: 189 LLVNLIL 195



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 15/190 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T F ++  ++ AS+I + +       P I         LL A P+   F L++      
Sbjct: 22  LTSFSLLFALLFASVITVILLF----YPKIRQASVYVLSLLYAIPSFALFTLLIPVTGLG 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    + ++   Q+ ++   +AG +   +   E A+   +T W+    I LP    
Sbjct: 78  TRT----AIIALVIYAQYTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILSKIQLPLAQS 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A       + ++         +   GLG+ + +     S P+++ G+++   
Sbjct: 134 SIFAGLRLAASSMIAIATIA-------STINAGGLGSILFDGLRTMSLPKLLWGIILTVA 186

Query: 565 FVLALNRFLW 574
             L +N  L+
Sbjct: 187 LSLLVNLILY 196


>gi|260642255|ref|ZP_05415104.2| spermidine/putrescine ABC transporter, permease protein PotB
           [Bacteroides finegoldii DSM 17565]
 gi|260622816|gb|EEX45687.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Bacteroides finegoldii DSM 17565]
          Length = 240

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 9/233 (3%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           +VI +  I+++   +      + +         ++      +    +   ++ +L  +  
Sbjct: 1   MVIPLFLIVVYAFTDDNGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTIVCILLGYPA 59

Query: 87  ATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           A + + S+      + +L I+   + IL     TV  F       V   E A IF +  +
Sbjct: 60  AWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGMVYN 116

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM       
Sbjct: 117 FIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSMPGVMSGIMMVFMPTIS 176

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 177 TFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 225



 Score = 37.2 bits (85), Expect = 8.6,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 10/193 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSC 440
           T    + + II +I+ I +G    WI     ++         +     N+    +  V+ 
Sbjct: 37  TFVYSIGIAIITTIVCILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVAL 96

Query: 441 VSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             ++ +       +  +       +++ +        + + E A        + +   +L
Sbjct: 97  FDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVL 156

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  ++G +       +   ++E+ +  +I L     G  I E+     +       
Sbjct: 157 PLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALS 212

Query: 560 LIMCCFVLALNRF 572
           LIM   + A + F
Sbjct: 213 LIMLLLIAATSLF 225


>gi|34557335|ref|NP_907150.1| phosphate ABC transporter permease [Wolinella succinogenes DSM
           1740]
 gi|34483051|emb|CAE10050.1| PHOSPHATE TRANSPORT PERMEASE [Wolinella succinogenes]
          Length = 390

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             L      T L ML  M IS+    + A      A   R+  ++   ++ + +IP + F
Sbjct: 166 SGLYSAVIGTILTMLVTMAISVPIGVMTAIYLEEFAPDNRVTQIIEVNINNLAAIPSILF 225

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +  F+N + G    + L     +    +  +  S   +L  +P  + +   +  L+
Sbjct: 226 GLLGLAIFINFF-GAPRSSPLVGGMTLALMSLPIIIVSSKAALKAVPASIRQAGFALGLT 284

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            WQ      +P + PG++   ++S++  
Sbjct: 285 KWQIVKDHVLPLATPGILTGSIISLAQA 312



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +++   I +P+G+              ++  I+     LAA P+ +F  L ++    
Sbjct: 176 ILTMLVTMAISVPIGVMTAIYLEEFAPDNRVTQIIEVNINNLAAIPSILFGLLGLAIFIN 235

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   + +   +   I+ +  A   A P   ++   +  +T W+  +  +LP
Sbjct: 236 FFGAPRSSPLVGGMTLALMSLPIIIVSSKAALKAVPASIRQAGFALGLTKWQIVKDHVLP 295

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG+I +   A
Sbjct: 296 LATPGILTGSIISLAQA 312


>gi|85706053|ref|ZP_01037148.1| ABC polyamine/opine transporter, inner membrane subunit
           [Roseovarius sp. 217]
 gi|85669217|gb|EAQ24083.1| ABC polyamine/opine transporter, inner membrane subunit
           [Roseovarius sp. 217]
          Length = 554

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 11/145 (7%)

Query: 119 TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            +V+   +       +I  +   I A+    +  M   MY  +  IP+     ++S   +
Sbjct: 402 VLVWLGLVADESRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIPQTYLRAAKSLGAT 461

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W  FW +  P S+PG+    ++       + +  E++            G++I+  I  
Sbjct: 462 NWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTT--------GTFISNRIAY 513

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF 260
               ++ + +   LG I L   L+ 
Sbjct: 514 HISSSLNWGLAAALGTILLAVVLIL 538



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 403 LVWLGLVADESRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIPQTYLRAAKSLGATN 462

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 463 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 522

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ +
Sbjct: 523 ----LAAALGTILLAVVLI 537


>gi|309811618|ref|ZP_07705397.1| putative choline transport system permease protein opuBB
           [Dermacoccus sp. Ellin185]
 gi|308434419|gb|EFP58272.1| putative choline transport system permease protein opuBB
           [Dermacoccus sp. Ellin185]
          Length = 216

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 79/206 (38%), Gaps = 16/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I      +   + + T  ++ +++++ +   V A +  ++++L         I  ++P  
Sbjct: 8   IADRWEDIAYRSYQHTSLVVQSVLLATIIALVLAVIVIRNKKLESFANIFSAIGLTLPSF 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +               + ++ A+    V  +  +    L  +  +L E +R   
Sbjct: 68  ALLGILLPLVGIG--------AVPSVIAVTFYAVLPILRNAVVGLQAVDANLLESARGMG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S       + +P + P ++  +  S     F V A     +G      PG+G YI   +
Sbjct: 120 MSKVATLLKVRLPLAWPVILAGVRTSTQMS-FGVAAIAAYALG------PGLGGYIFTGL 172

Query: 234 -KEQDLLAILYAMLTMLGVIFLYDQL 258
            +   + AI +A++  +G++ L   L
Sbjct: 173 SQNGGVNAINFALVGTIGIVILALVL 198



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  +++A+II + + + +     + S    F+ +    P+     +++  V    +   
Sbjct: 26  VVQSVLLATIIALVLAVIVIRNKKLESFANIFSAIGLTLPSFALLGILLPLVGIGAVPSV 85

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + ++   +      IL N + G  A   +  E A    ++       + LP  +P  + G
Sbjct: 86  IAVTFYAVL----PILRNAVVGLQAVDANLLESARGMGMSKVATLLKVRLPLAWPVILAG 141

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCF 565
             T+   ++  + ++  A          GLG YI    +++    +    ++G + +   
Sbjct: 142 VRTSTQMSFGVAAIAAYALG-------PGLGGYIFTGLSQNGGVNAINFALVGTIGIVIL 194

Query: 566 VLALNRFL 573
            L L+  L
Sbjct: 195 ALVLDLIL 202


>gi|168180589|ref|ZP_02615253.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum NCTC 2916]
 gi|182668373|gb|EDT80352.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum NCTC 2916]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G    + LA I  +    +  +      ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYGGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISN 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYGGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|147672465|ref|YP_001214909.1| phosphate ABC transporter, permease protein [Vibrio cholerae O395]
 gi|146314848|gb|ABQ19388.1| phosphate ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227014702|gb|ACP10911.1| phosphate ABC transporter, permease protein [Vibrio cholerae O395]
          Length = 327

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS----- 66
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 49  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALFGVATM 108

Query: 67  --RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 109 IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 168

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 169 IVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 228

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 229 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 266



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 95  QDWLPPALFGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 154

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+    +    N  L   +++       ++        A P  
Sbjct: 155 GIPSVVYGFFGLVIIVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 214

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 215 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 274

Query: 539 L 539
           L
Sbjct: 275 L 275


>gi|254713458|ref|ZP_05175269.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           M644/93/1]
 gi|254716186|ref|ZP_05177997.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           M13/05/1]
 gi|261217959|ref|ZP_05932240.1| phosphate ABC transporter [Brucella ceti M13/05/1]
 gi|261321191|ref|ZP_05960388.1| phosphate ABC transporter [Brucella ceti M644/93/1]
 gi|260923048|gb|EEX89616.1| phosphate ABC transporter [Brucella ceti M13/05/1]
 gi|261293881|gb|EEX97377.1| phosphate ABC transporter [Brucella ceti M644/93/1]
          Length = 436

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|225626509|ref|ZP_03784548.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           str. Cudo]
 gi|254707342|ref|ZP_05169170.1| phosphate ABC transporter, permease protein PstA [Brucella
           pinnipedialis M163/99/10]
 gi|254709116|ref|ZP_05170927.1| phosphate ABC transporter, permease protein PstA [Brucella
           pinnipedialis B2/94]
 gi|256030642|ref|ZP_05444256.1| phosphate ABC transporter, permease protein PstA [Brucella
           pinnipedialis M292/94/1]
 gi|256158644|ref|ZP_05456527.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           M490/95/1]
 gi|256254048|ref|ZP_05459584.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           B1/94]
 gi|260169546|ref|ZP_05756357.1| phosphate ABC transporter, permease protein PstA [Brucella sp.
           F5/99]
 gi|261221188|ref|ZP_05935469.1| phosphate ABC transporter [Brucella ceti B1/94]
 gi|261314825|ref|ZP_05954022.1| phosphate ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261316616|ref|ZP_05955813.1| phosphate ABC transporter [Brucella pinnipedialis B2/94]
 gi|261759073|ref|ZP_06002782.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265987688|ref|ZP_06100245.1| phosphate ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265997149|ref|ZP_06109706.1| phosphate ABC transporter [Brucella ceti M490/95/1]
 gi|225618166|gb|EEH15209.1| phosphate ABC transporter, permease protein PstA [Brucella ceti
           str. Cudo]
 gi|260919772|gb|EEX86425.1| phosphate ABC transporter [Brucella ceti B1/94]
 gi|261295839|gb|EEX99335.1| phosphate ABC transporter [Brucella pinnipedialis B2/94]
 gi|261303851|gb|EEY07348.1| phosphate ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261739057|gb|EEY27053.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|262551617|gb|EEZ07607.1| phosphate ABC transporter [Brucella ceti M490/95/1]
 gi|264659885|gb|EEZ30146.1| phosphate ABC transporter [Brucella pinnipedialis M292/94/1]
          Length = 436

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|315196708|gb|EFU27054.1| hypothetical protein CGSSa01_06812 [Staphylococcus aureus subsp.
           aureus CGS01]
          Length = 219

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGVI 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGVIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|254519821|ref|ZP_05131877.1| spermidine/putrescine ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226913570|gb|EEH98771.1| spermidine/putrescine ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 284

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 84/228 (36%), Gaps = 22/228 (9%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRT 68
           +R I  + F + + + ++  + I+L      T P                PQY     R+
Sbjct: 8   NRNIAASPFIIWSALFIVIPLLIVLFFGFTVTTPEGDYSFSLENFTRLLQPQYIKVFGRS 67

Query: 69  TLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDI-------MQSIPILGFLTFT- 119
               L + +  L+  +  A + +K     G +L+ +  +       +++     +L    
Sbjct: 68  LWLALLSTIWCLVLGYPVAYIISKMKPSKGNILIMLFIVPMWMNFLLRT---YAWLPILG 124

Query: 120 -------VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                  ++ +  + P   +  + A I  +  + +  M   +Y  L  + +DL   +   
Sbjct: 125 KNGFINNILGYFGVGPFTFLYNDGAVILGMIYNFLPFMVLPIYTVLTKMDKDLLNAAADL 184

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
             +  + F  + +P SMPG+V  + M         V S ++  G  ++
Sbjct: 185 GANRSEIFRKIVLPLSMPGVVSGITMVFMPAVSTFVISRLLGGGQYML 232



 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 78/225 (34%), Gaps = 28/225 (12%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           ENF +L   Q +       W  ++  +   +    + YI++         +I L  + M+
Sbjct: 50  ENFTRLLQPQYIKVFGRSLWLALLSTIWCLVLGYPVAYIISKMKPSKGNILIMLFIVPMW 109

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
              +  ++ +  W+P+   +G    I++ +                        +  L  
Sbjct: 110 ---MNFLLRTYAWLPI---LGKNGFINNILG-----------------YFGVGPFTFLYN 146

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  + L MI+    +++  +    +    D    A+         +R I+LP   P  V+
Sbjct: 147 DGAVILGMIYNFLPFMVLPIYTVLTKMDKDLLNAAADLGANRSEIFRKIVLPLSMPGVVS 206

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI-AESTEKGSF 552
           G       A +  ++S +   G   L    LG  I  + T  G +
Sbjct: 207 GITMVFMPAVSTFVISRLLGGGQYML----LGNLIEQQFTMMGDW 247


>gi|170756588|ref|YP_001782069.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum B1 str. Okra]
 gi|169121800|gb|ACA45636.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum B1 str. Okra]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G    + LA I  +    +  +      ++  +P+   + S     + WQ    
Sbjct: 151 IIKRVYGGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISN 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|49482687|ref|YP_039911.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257424573|ref|ZP_05601002.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427239|ref|ZP_05603641.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429875|ref|ZP_05606262.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432578|ref|ZP_05608941.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435483|ref|ZP_05611534.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903046|ref|ZP_06310939.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|282907435|ref|ZP_06315283.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282907783|ref|ZP_06315623.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282912668|ref|ZP_06320464.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282913288|ref|ZP_06321080.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282918242|ref|ZP_06325983.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282922916|ref|ZP_06330606.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|283959891|ref|ZP_06377332.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293498335|ref|ZP_06666189.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293509276|ref|ZP_06667993.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus M809]
 gi|293550543|ref|ZP_06673215.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|295426994|ref|ZP_06819633.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297588795|ref|ZP_06947436.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49240816|emb|CAG39483.1| putative transport system membrane protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257273591|gb|EEV05693.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276870|gb|EEV08321.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257280356|gb|EEV10943.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283457|gb|EEV13589.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257286079|gb|EEV16195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282315137|gb|EFB45523.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus C101]
 gi|282317939|gb|EFB48307.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282323388|gb|EFB53707.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282324364|gb|EFB54680.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282328347|gb|EFB58620.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282330334|gb|EFB59855.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282597505|gb|EFC02464.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|283789483|gb|EFC28310.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290919590|gb|EFD96666.1| D-methionine ABC transporter, permease protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291097266|gb|EFE27524.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467915|gb|EFF10424.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus subsp. aureus M809]
 gi|295129446|gb|EFG59073.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297577306|gb|EFH96019.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312436451|gb|ADQ75522.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315193200|gb|EFU23599.1| putative transport system membrane protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 219

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL PI++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|21282146|ref|NP_645234.1| hypothetical protein MW0417 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485326|ref|YP_042547.1| putative transport system membrane protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|297209040|ref|ZP_06925440.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911043|ref|ZP_07128492.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21203582|dbj|BAB94282.1| MW0417 [Staphylococcus aureus subsp. aureus MW2]
 gi|49243769|emb|CAG42194.1| putative transport system membrane protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|296886311|gb|EFH25244.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887222|gb|EFK82418.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|329730684|gb|EGG67065.1| D-methionine transport system permease protein MetI [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 219

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL PI++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPIINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPIINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|300710210|ref|YP_003736024.1| phosphate ABC transporter, inner membrane subunit PstA
           [Halalkalicoccus jeotgali B3]
 gi|299123893|gb|ADJ14232.1| phosphate ABC transporter, inner membrane subunit PstA
           [Halalkalicoccus jeotgali B3]
          Length = 295

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 10/207 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMVISLLFT 83
             + GI+ + +  +  T      +D+  +T   H LP+ A      +  +  MV+  L T
Sbjct: 30  AALFGIVTLAVLLVYVTIDAVGWLDLQFLTSPPHPLPEEAGIFPALVGSIVLMVLIALIT 89

Query: 84  FVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           F     AA          RL   +   +  +  +P + +    +  F+ L      G  L
Sbjct: 90  FPLGVGAAVYLEEYASDGRLTQFIQLNIANLAGVPSVVYGLLGLGLFVQL-INFGYGTLL 148

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A F +    +  +  S  +++ ++P  L E S     +  Q    + +P S+PG++   
Sbjct: 149 VAGFTVSLLILPIVIISAQEAIRSVPDSLREASYGMGATKRQTIRNVVLPRSLPGIMTGT 208

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLP 223
           ++++           MI V  TV  +P
Sbjct: 209 ILALGRAIGETAPLIMIGVPTTVFGVP 235



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 70/219 (31%), Gaps = 7/219 (3%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGC 384
            + +   +  +     + +      +V      + W  + ++ +      +   +     
Sbjct: 17  RWKDRIFESVTLAAALFGIVTLAVLLVYVTIDAVGWLDLQFLTSPPHPLPEEAGIFPALV 76

Query: 385 ITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            ++  +V++ +I   + +   +++        ++  IQ     LA  P+ V+  L +   
Sbjct: 77  GSIVLMVLIALITFPLGVGAAVYLEEYASDGRLTQFIQLNIANLAGVPSVVYGLLGLGLF 136

Query: 442 S---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                +     L     +       ++ +      + P+  +E +     T  +  R ++
Sbjct: 137 VQLINFGYGTLLVAGFTVSLLILPIVIISAQEAIRSVPDSLREASYGMGATKRQTIRNVV 196

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           LP   P  +TG I A G A   +    +           
Sbjct: 197 LPRSLPGIMTGTILALGRAIGETAPLIMIGVPTTVFGVP 235


>gi|291533777|emb|CBL06890.1| ABC-type metal ion transport system, permease component [Megamonas
           hypermegale ART12/1]
          Length = 211

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL---AAKSRRLG-----MVLVPILDIMQSIPI 112
           LP+    T   +  +M+++         L     K++ L        L  I++ ++SIP 
Sbjct: 3   LPKALGETVYMVAVSMIVASAIGIPLGVLLLATGKNQVLELGIANKTLSSIVNCVRSIP- 61

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  + +  +   +  SL  +P  L E + S 
Sbjct: 62  FIILMVAIIPFTRLIVGSSIGTT-AAIVPLIIASIPLIARLVETSLREVPYGLIEAALSM 120

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             + +Q    + +P +MP +V  +
Sbjct: 121 GATPYQIIRRVLLPEAMPSIVAQL 144



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHIS-----SKIQPFAQLLAAFPANVFFPLV 437
           T++ V V +I+AS I IP+G+ +   G    +        +      + + P  +   + 
Sbjct: 10  TVYMVAVSMIVASAIGIPLGVLLLATGKNQVLELGIANKTLSSIVNCVRSIPFIILM-VA 68

Query: 438 VSCVSYYHLNPNLWLSLLM---IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++  +  +   I  +   I   V       P    E A S   T ++  
Sbjct: 69  IIPFTRLIVGSSIGTTAAIVPLIIASIPLIARLVETSLREVPYGLIEAALSMGATPYQII 128

Query: 495 RYIILPGIFPYYVTGAITAC 514
           R ++LP   P  V    T  
Sbjct: 129 RRVLLPEAMPSIVAQLTTVI 148


>gi|222151443|ref|YP_002560599.1| ABC-type phosphate transport system permease component PstA
           [Macrococcus caseolyticus JCSC5402]
 gi|222120568|dbj|BAH17903.1| ABC-type phosphate transport system permease component PstA
           [Macrococcus caseolyticus JCSC5402]
          Length = 297

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 68/188 (36%), Gaps = 6/188 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++  +++  ++  ++        P    +    T     +      T   M++   I++ 
Sbjct: 32  IIGLIVLAMLLFDIIRKGAGYLTPEFFTNFSSTTPSKAGIKGALIGTLWLMMTIAPIAIT 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAE 135
                A      AK       +   +  + S+P + F    +  F     +    +  + 
Sbjct: 92  LGVATAIYMEEYAKDNFFTRFVKVNIANLASVPSVVFGLLGLTLFVRGGGIEALSLGKSV 151

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LAA   +    +  +  S  +++  +P  + E S     + WQ    + +P S+PG++  
Sbjct: 152 LAAALTMSLMILPVIIVSSQEAIRAVPNAIREASLGLGGTKWQTITNVVLPASIPGILTG 211

Query: 196 MMMSMSGG 203
            ++++S  
Sbjct: 212 TILALSRA 219



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYV 379
                  +    + + ++  I    V+  +   I  +  GY+   F      T      +
Sbjct: 12  KLSGRLTKNAIIKFIFFLCTIIGLIVLAMLLFDIIRKGAGYLTPEFFTNFSSTTPSKAGI 71

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPL 436
                 T++ ++ +  IA  + +   I++         +  ++     LA+ P+ VF  L
Sbjct: 72  KGALIGTLWLMMTIAPIAITLGVATAIYMEEYAKDNFFTRFVKVNIANLASVPSVVFGLL 131

Query: 437 VVSCVSYYHL-------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
            ++                 L  +L M       I+ +      A PN  +E +     T
Sbjct: 132 GLTLFVRGGGIEALSLGKSVLAAALTMSLMILPVIIVSSQEAIRAVPNAIREASLGLGGT 191

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            W+    ++LP   P  +TG I A   A   +    V     I ++T 
Sbjct: 192 KWQTITNVVLPASIPGILTGTILALSRAIGETAPLVVIGIPTIFMKTP 239


>gi|16130066|ref|NP_416632.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|89108945|ref|AP_002725.1| predicted transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081751|ref|YP_001731071.1| ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901312|ref|YP_002927108.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli BW2952]
 gi|465590|sp|P33359|YEHW_ECOLI RecName: Full=Putative osmoprotectant uptake system permease
           protein yehW
 gi|405859|gb|AAA60491.1| yehW [Escherichia coli]
 gi|1788449|gb|AAC75189.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|85675242|dbj|BAE76605.1| predicted transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169889586|gb|ACB03293.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|238863240|gb|ACR65238.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|260448776|gb|ACX39198.1| binding-protein-dependent transport systems inner membrane
           component [Escherichia coli DH1]
 gi|315136761|dbj|BAJ43920.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli DH1]
 gi|744228|prf||2014253Y yehW gene
          Length = 243

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRVRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRVRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|16264432|ref|NP_437224.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307306795|ref|ZP_07586536.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|15140569|emb|CAC49084.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|306902086|gb|EFN32684.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 288

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGF-LTFT 119
             Y   + +  +++ VI+L          A+ R +    +     + +++P +   L   
Sbjct: 79  WDYFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLF 138

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++Y             L  +       +W +          +P+DL E ++    + WQ 
Sbjct: 139 MLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTPWQA 194

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  I        LP +G     A    D  
Sbjct: 195 FWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLP-VGLLDYTAEFTIDWR 253

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 254 GMCALAVVMIVPALTLTFIIQKHLV 278



 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 3/165 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           ++   V   +IA  I +  G           S I     L  A P       +    +  
Sbjct: 85  SLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFMLYART 144

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    +  +L            +I G     P D  E A     T W+ +  +  P   
Sbjct: 145 GIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEFPLAG 204

Query: 504 PYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAEST 547
           P   +  I A   +WN  ++ S++    +      GL  Y AE T
Sbjct: 205 PGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFT 249


>gi|306831566|ref|ZP_07464724.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|304426351|gb|EFM29465.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 208

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 75/187 (40%), Gaps = 19/187 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++ +LLF  V   +     ++    V +L ++ +IP     T  +       P   +G 
Sbjct: 26  SLLFALLFASVITVILLFYPKIRQASVYVLSLLYAIPSFALFTLLI-------PVTGLGT 78

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I  +  +Q + +  +    L  +   + E +    ++ WQ    + +P +   +  
Sbjct: 79  RTAIIALVIYAQ-YTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILAKIQLPLAQSSIFA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + ++         AS MI +    + I   G+GS +   ++   L  +L+ ++  + + 
Sbjct: 138 GLRLA---------ASSMIAIATIASTINAGGLGSILFDGLRTMSLPKLLWGIILTVALS 188

Query: 253 FLYDQLL 259
            L + +L
Sbjct: 189 LLVNLIL 195



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 15/190 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T F ++  ++ AS+I + +       P I         LL A P+   F L++      
Sbjct: 22  LTSFSLLFALLFASVITVILLF----YPKIRQASVYVLSLLYAIPSFALFTLLIPVTGLG 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    + ++   Q+ ++   +AG +   +   E A+   +T W+    I LP    
Sbjct: 78  TRT----AIIALVIYAQYTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILAKIQLPLAQS 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A       + ++         +   GLG+ + +     S P+++ G+++   
Sbjct: 134 SIFAGLRLAASSMIAIATIA-------STINAGGLGSILFDGLRTMSLPKLLWGIILTVA 186

Query: 565 FVLALNRFLW 574
             L +N  L+
Sbjct: 187 LSLLVNLILY 196


>gi|304394456|ref|ZP_07376377.1| phosphate ABC transporter, permease protein PstA [Ahrensia sp.
           R2A130]
 gi|303293366|gb|EFL87745.1| phosphate ABC transporter, permease protein PstA [Ahrensia sp.
           R2A130]
          Length = 419

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 11/179 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             ++++     F   TLAA          R+  ++   ++ + ++P + F    +  F+N
Sbjct: 205 FLSLMVCFTLAFPLGTLAAVYLEEFAPKGRISQIIEVNINNLAAVPSIVFGLLGLAIFLN 264

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        +  +       +  +  +   SL  +P  + E +     S  Q  ++  V
Sbjct: 265 FFDLPRSTPLVGGMVLAL-MTLPTIIIASRASLRAVPPSIREAAYGLGASKVQTTFHHVV 323

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           P ++PG++   ++ M+          MI +   ++ +P   S +  A     +   L+A
Sbjct: 324 PLAIPGMLTGSIIGMAQALGETAPLLMIGMVAFIVDIP---SGVLDAATALPVQIFLWA 379



 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            + +++   +  P+G               IS  I+     LAA P+ VF  L ++    
Sbjct: 205 FLSLMVCFTLAFPLGTLAAVYLEEFAPKGRISQIIEVNINNLAAVPSIVFGLLGLAIFLN 264

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   +++   T   I+    A   A P   +E A     +  +   + ++P
Sbjct: 265 FFDLPRSTPLVGGMVLALMTLPTIIIASRASLRAVPPSIREAAYGLGASKVQTTFHHVVP 324

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVAS 528
              P  +TG+I     A   +    +  
Sbjct: 325 LAIPGMLTGSIIGMAQALGETAPLLMIG 352


>gi|289674575|ref|ZP_06495465.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|330938712|gb|EGH42266.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330977211|gb|EGH77168.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 214

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|237719286|ref|ZP_04549767.1| putrescine transport system permease potH [Bacteroides sp. 2_2_4]
 gi|293368978|ref|ZP_06615579.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|315923481|ref|ZP_07919721.1| putrescine transport system permease potH [Bacteroides sp. D2]
 gi|229451146|gb|EEO56937.1| putrescine transport system permease potH [Bacteroides sp. 2_2_4]
 gi|292635998|gb|EFF54489.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f]
 gi|313697356|gb|EFS34191.1| putrescine transport system permease potH [Bacteroides sp. D2]
          Length = 266

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  ++I +  I+++   + +    + +         ++      +    +   ++ +L  
Sbjct: 24  AIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTLVCILLG 82

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           +  A + + S+      + +L I+   + IL     TV  F       V   E A IF +
Sbjct: 83  YPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGM 139

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM    
Sbjct: 140 VYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFLKAVLPLSMPGVMSGIMMVFMP 199

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 200 TISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 251



 Score = 37.6 bits (86), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 337 NQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVI--WLGCITMFRVVV 392
           + R S+ L    F  +  +     I   +      H T  +            T    + 
Sbjct: 10  SSRKSWTLPYIIFSAIFVIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAINTFVYSIG 69

Query: 393 LIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLN 447
           + II +++ I +G    WI     ++         +     N+    +  V+   ++ + 
Sbjct: 70  IAIITTLVCILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVP 129

Query: 448 PNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                 +  +       +++ +        + + E A        + +   +LP   P  
Sbjct: 130 LGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFLKAVLPLSMPGV 189

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           ++G +       +   ++E+ +  +I L     G  I E+     +       LIM   +
Sbjct: 190 MSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALSLIMLLLI 245

Query: 567 LALNRF 572
            A + F
Sbjct: 246 AATSLF 251


>gi|213966471|ref|ZP_03394645.1| phosphate ABC transporter, permease protein PstA [Corynebacterium
           amycolatum SK46]
 gi|213950897|gb|EEB62305.1| phosphate ABC transporter, permease protein PstA [Corynebacterium
           amycolatum SK46]
          Length = 312

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 96/254 (37%), Gaps = 19/254 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP---RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           L    LV  +  +++ G                V +      +      T ++ L   ++
Sbjct: 48  LALVPLVWVLFELVVRGTPSLLNGEWWTASQRGVTVGASAGGVAHAIVGTLVQALVTTLM 107

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ F    A      A + RLG V   ++DI+  +P +    F    ++ ++     G  
Sbjct: 108 TVPFGIFVAIYLVEYAGNSRLGKVTTFMVDILSGVPSIVASLFIYSMWVVMFGMSRSG-- 165

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A   A+    +  +  +  + L  +P +L E S +  +  W+    + +P ++ G+V  
Sbjct: 166 FAVSLALVLLMLPIVVRNTEEMLRIVPHELREASYALGVPKWKTILKIVLPTALSGIVTG 225

Query: 196 MMMSM------SGGWFFVVA-SEMIVVGDTVIPLPGIGSYIALAIKEQDLLA----ILYA 244
           +M+++      S     +VA S +I           +  ++    K  +  A    +  A
Sbjct: 226 IMLAVARVMGESAPMLILVATSRIITYSPFGQSQSSLPLFMLDMYKAGNTGAAFDKMWGA 285

Query: 245 MLTMLGVIFLYDQL 258
            LT++ +I L + L
Sbjct: 286 ALTLVLIIALINIL 299



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANV--FFPLVVSCV 441
           +V  ++ +++ +P GI++            +         +L+  P+ V   F   +  V
Sbjct: 98  LVQALVTTLMTVPFGIFVAIYLVEYAGNSRLGKVTTFMVDILSGVPSIVASLFIYSMWVV 157

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            +        +SL ++      ++ N        P++ +E + +  +  W+    I+LP 
Sbjct: 158 MFGMSRSGFAVSLALVLLMLPIVVRNTEEMLRIVPHELREASYALGVPKWKTILKIVLPT 217

Query: 502 IFPYYVTGAITACGGAW-------NASIVSEVASWGHIHLRTTGLGAYIAESTEKGS--- 551
                VTG + A                 S + ++       + L  ++ +  + G+   
Sbjct: 218 ALSGIVTGIMLAVARVMGESAPMLILVATSRIITYSPFGQSQSSLPLFMLDMYKAGNTGA 277

Query: 552 -FPEVVLGVLIMCCFVLALNRF 572
            F ++    L +   +  +N  
Sbjct: 278 AFDKMWGAALTLVLIIALINIL 299


>gi|182678076|ref|YP_001832222.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633959|gb|ACB94733.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 262

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 7/203 (3%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +V    Y+D   +     +T+       + A +  + V +     P       PFA +L 
Sbjct: 43  LVIETLYRDRAILFPALWVTVQITFGAFLAAVVGGVSVALLFARWPWAERSFLPFAIILQ 102

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
             P     PL+V      +L+    + +       + IL N   G +A      ++ + +
Sbjct: 103 VTPIVAVAPLLVI-----YLDAGTAVLVCAFLVAFFPILANTALGLAATDRMLVDLFAFY 157

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +  +   ++  P   PY++ G     G A   +IV+E+A+              I E+
Sbjct: 158 GASRAQTLWWLRWPAGLPYFLGGLKIGGGLALIGAIVAELAAGAAGKGAGL--AFRITEA 215

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
             + + P +  G+ ++    + +
Sbjct: 216 GYRLNIPRMFAGLALISLTGIVI 238



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P   + I  +  D   L      T      A + +++     A L A+        +P  
Sbjct: 39  PAPSLVIETLYRDRAILFPALWVTVQITFGAFLAAVVGGVSVALLFARWPWAERSFLPFA 98

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            I+Q  PI+      V+Y         + A  A +   F    + +  +    L    R 
Sbjct: 99  IILQVTPIVAVAPLLVIY---------LDAGTAVLVCAFLVAFFPILANTALGLAATDRM 149

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           L ++   +  S  Q  W+L  P  +P 
Sbjct: 150 LVDLFAFYGASRAQTLWWLRWPAGLPY 176


>gi|330937817|gb|EGH41663.1| glycine betaine/carnitine/choline ABC transporter permease
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 171

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 63/154 (40%), Gaps = 10/154 (6%)

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           ++ ++P +      + ++     G      + AI A+F   +  +  + Y +L  +   +
Sbjct: 14  VLLTVPSIALFGLLLPFYSKFGQGLGP---MPAITAVFLYSLLPIMRNTYLALTGVEPGI 70

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E ++   ++  Q+   + +P ++P ++  +  ++      +  +  I  G       G+
Sbjct: 71  REAAKGIGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG-------GL 123

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           G  I  +I   D+  ++   + +  +  + D LL
Sbjct: 124 GVLILASISRSDMSMLIVGAVLVSILAIIADLLL 157



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 8/163 (4%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIA 470
             ++  +Q  A +L   P+   F L++   S +        ++  +   +   I+ N   
Sbjct: 2   RVVAGPLQASATVLLTVPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYL 61

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
             +      +E A    +T  +  R + LP   P  + G  TA         ++     G
Sbjct: 62  ALTGVEPGIREAAKGIGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAG 121

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG  I  S  +     +++G +++    +  +  L
Sbjct: 122 -------GLGVLILASISRSDMSMLIVGAVLVSILAIIADLLL 157


>gi|327393233|dbj|BAK10655.1| inner membrane ABC transporter permease protein YehW [Pantoea
           ananatis AJ13355]
          Length = 243

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 87/245 (35%), Gaps = 21/245 (8%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L ++++  +  +               D+        S  Q        +++A ++++
Sbjct: 6   DPLLWLVLFYLSLLAAMPYSGPVFAAWFPDLARPLYQQDSFWQLTLAHLFLVVTASLMAV 65

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIM----QSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +       L   +R  G    P+L+ +    Q+IP +  L   V                
Sbjct: 66  VIGVGSGVLV--TRPAGRAFRPLLETIAAAGQTIPPVAVLAIAVPVMG--------FGAW 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            A+ A+    +  +       L ++P    E++    +SGWQ+ W + +  + P ++  +
Sbjct: 116 PAVVALLLYGLLPILQGTLAGLGSVPASSREIAVGVGMSGWQRLWQVELALAAPVIIAGI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
             S       V+ +       + +    +GS I + +   +   ++   L +  +  + D
Sbjct: 176 RNS-------VIINIGTAAIASTVGAKSLGSPIIIGLSGFNTAYVIQGALLVGLLAIVSD 228

Query: 257 QLLFR 261
           +L  R
Sbjct: 229 RLFER 233



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L +F+  ++  +       +  +               L    +F VV   ++A +I +
Sbjct: 10  WLVLFYLSLLAAMPYSGPVFAAWFPDLARPLYQQDSFWQLTLAHLFLVVTASLMAVVIGV 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             G+ +          +P  + +AA     P      + V  + +      + L L  + 
Sbjct: 70  GSGVLV--TRPAGRAFRPLLETIAAAGQTIPPVAVLAIAVPVMGFGAWPAVVALLLYGLL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                     +AG  + P   +E+A    ++GW+    + L    P  + G         
Sbjct: 128 PIL----QGTLAGLGSVPASSREIAVGVGMSGWQRLWQVELALAAPVIIAGIR------- 176

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           N+ I++   +     +    LG+ I       +   V+ G L++    +  +R  
Sbjct: 177 NSVIINIGTAAIASTVGAKSLGSPIIIGLSGFNTAYVIQGALLVGLLAIVSDRLF 231


>gi|225351637|ref|ZP_03742660.1| hypothetical protein BIFPSEUDO_03234 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157981|gb|EEG71264.1| hypothetical protein BIFPSEUDO_03234 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 336

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     I   FTYQD ++  W    T+  VVV    A+++ I  G  +
Sbjct: 93  FTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF-LNTILYVVVGAGGATLLAIMGGYGL 151

Query: 409 GFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                     +        + P            +  +L    W  ++    + + +   
Sbjct: 152 AKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLM 211

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A       +R +  + LP + P  VT A+      W N  +   +
Sbjct: 212 WIFSDQAVPTELLEAARVDGAGEFRTFFQVSLPLLAPGIVTTALFTIVATWNNYFLPLIM 271

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
               + +  T GL  +  +++  G
Sbjct: 272 LKDSNWYPLTIGLNQWKDQASTAG 295



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK R      +  ++    S+P +       +
Sbjct: 124 RWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFL 183

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R      ++ F+
Sbjct: 184 LFAKLNLTNTP----WAMIIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFF 239

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 240 QVSLPLLAPGIVTTALFTIVATWN 263


>gi|238916413|ref|YP_002929930.1| phosphate transport system permease protein [Eubacterium eligens
           ATCC 27750]
 gi|238871773|gb|ACR71483.1| phosphate transport system permease protein [Eubacterium eligens
           ATCC 27750]
          Length = 330

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 67/171 (39%), Gaps = 24/171 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY- 443
           +    +A +I +P+G+             +++ +QP  +LLAA P+ ++  L +  ++  
Sbjct: 104 IAGTTLAILIGVPIGLLTAVFLTEIAGKKLAAVVQPAVELLAAIPSVIYGLLGLMLLNPL 163

Query: 444 ----------------YHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSF 486
                           Y    NL  ++L++       + N+  +   A P + +  + + 
Sbjct: 164 LYKLEKHVFANSTTHQYTGGANLLAAVLVLAIMILPTVINMSASAIRAVPMNLRATSLAL 223

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T  +    +++P      +TG +   G A   ++   + + G ++L   
Sbjct: 224 GATKIQTIFKVVVPAAKSGIITGIVLGIGRALGEAMAINLVAGGSVNLPLP 274



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 16/170 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV------- 120
           TTL +L  + I LL       +A K  +L  V+ P ++++ +IP + +    +       
Sbjct: 107 TTLAILIGVPIGLLTAVFLTEIAGK--KLAAVVQPAVELLAAIPSVIYGLLGLMLLNPLL 164

Query: 121 ------VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFR 173
                 V+  +       GA L A   +    +     +M  S +  +P +L   S +  
Sbjct: 165 YKLEKHVFANSTTHQYTGGANLLAAVLVLAIMILPTVINMSASAIRAVPMNLRATSLALG 224

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            +  Q  + + VP +  G++  +++ +       +A  ++  G   +PLP
Sbjct: 225 ATKIQTIFKVVVPAAKSGIITGIVLGIGRALGEAMAINLVAGGSVNLPLP 274


>gi|297579793|ref|ZP_06941720.1| phosphate ABC transporter [Vibrio cholerae RC385]
 gi|297535439|gb|EFH74273.1| phosphate ABC transporter [Vibrio cholerae RC385]
          Length = 327

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS----- 66
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 49  KERIFHGLFLTSAVIGILSLAIIAYFIVRESIPAFQEAGLTGIVLGQDWLPPALFGVATM 108

Query: 67  --RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 109 IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 168

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 169 IVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 228

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 229 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 266



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 95  QDWLPPALFGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 154

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 155 GIPSVVYGFFGLVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 214

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 215 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 274

Query: 539 L 539
           L
Sbjct: 275 L 275


>gi|153953974|ref|YP_001394739.1| hypothetical protein CKL_1349 [Clostridium kluyveri DSM 555]
 gi|146346855|gb|EDK33391.1| PstC [Clostridium kluyveri DSM 555]
          Length = 301

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 68/159 (42%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   L A++IS   +   A        R    +L P L++   IP +  G++ F+V+  
Sbjct: 83  STFVSLGAVIISAPISIALAVFMHYISPRIGSKILQPSLELFVGIPSVVYGWIGFSVLIP 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+      +  + +A I  +    +  ++     ++  IP+   E S     + WQ    
Sbjct: 143 FLKNSFHGIGFSLIAGILVLSIMILPTISSISADAVKTIPKSYMEASYGLGATRWQTISK 202

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 203 VIVPSAKNGILTGVVLGLARAFGEALAVQMVIGNTIKFP 241



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 15/211 (7%)

Query: 344 LDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           L I +F    G+A  +   +    ++ +     D         I       + + A II 
Sbjct: 35  LSIIFFITSKGMATFVKRGYPLWEFLFSSKWAPDGNAPKLGALIFFAGSTFVSLGAVIIS 94

Query: 402 IPVGIWIG-----FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPN 449
            P+ I +        P I S  +QP  +L    P+ V+  +  S +      S++ +  +
Sbjct: 95  APISIALAVFMHYISPRIGSKILQPSLELFVGIPSVVYGWIGFSVLIPFLKNSFHGIGFS 154

Query: 450 LWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           L   +L++       + ++        P  + E +     T W+    +I+P      +T
Sbjct: 155 LIAGILVLSIMILPTISSISADAVKTIPKSYMEASYGLGATRWQTISKVIVPSAKNGILT 214

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           G +     A+  ++  ++     I   +  L
Sbjct: 215 GVVLGLARAFGEALAVQMVIGNTIKFPSGLL 245


>gi|83953630|ref|ZP_00962351.1| probable ferric iron transport system permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841575|gb|EAP80744.1| probable ferric iron transport system permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 567

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 123/431 (28%), Gaps = 49/431 (11%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  ++   L  IP+++ E +R     G + +W + +P ++P L     ++          
Sbjct: 163 IFLTLRAGLRAIPQEVVEAARISGARGLRTWWQVVMPLTLPSLAAGTAITFVTALGNFGI 222

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             M+ +      LP +       +    L  +  ++L ML        +L +       +
Sbjct: 223 PAMLGIPAGYATLPTLVYQKLAGMGTSVLAEV--SILAMLIGAVAVTGILTQRFFQSRQR 280

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
             L                                    +    + L   LG  R     
Sbjct: 281 VYL------------------------------------VGATSRPLAIPLGAARLPVEV 304

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
               +     V  M  +    +V    + +   ++                     +   
Sbjct: 305 LLWAVVCTILVLPMFGLLATSLVPAYGVPLRLDTVTLQAWTEVLLRQPVTTRAFANSFGL 364

Query: 390 VVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +   ++  ++ +P+   +   P  +S        L  A P  V    ++  +       
Sbjct: 365 AIGAAVVLILLCLPLAWLMERNPTRLSRLFDSLLDLPYALPGVVLSIAMILLLIKLPFTD 424

Query: 449 N-----LWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 +W+  L      + ++F  V A          E A S   + ++  R +I+P  
Sbjct: 425 ATLYGTIWIIFLAYLARFFAVMFRPVQASLKQLDPAMGEAAQSVGASLFQRLRDVIVPLS 484

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    GAI     A+N   VS +            LG  I    + G         + +
Sbjct: 485 APAAAAGAILVFLTAFNELTVSALLWSSGTET----LGVVIFNLDDSGETAMASALAMTI 540

Query: 563 CCFVLALNRFL 573
              V+AL   +
Sbjct: 541 VLVVMALMVLV 551



 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 4/199 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +    + A V+ +L     A L  ++  RL  +   +LD+  ++P +      ++  + L
Sbjct: 361 SFGLAIGAAVVLILLCLPLAWLMERNPTRLSRLFDSLLDLPYALPGVVLSIAMILLLIKL 420

Query: 127 -YPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +   +  IF  + ++ + + F  +  SL  +   + E ++S   S +Q+   + 
Sbjct: 421 PFTDATLYGTIWIIFLAYLARFFAVMFRPVQASLKQLDPAMGEAAQSVGASLFQRLRDVI 480

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP S P      ++     +  +  S  ++       L  +   +  + +     A+   
Sbjct: 481 VPLSAPAAAAGAILVFLTAFNELTVS-ALLWSSGTETLGVVIFNLDDSGETAMASALAMT 539

Query: 245 MLTMLGVIFLYDQLLFRPM 263
           ++ ++  + +  QL+ R  
Sbjct: 540 IVLVVMALMVLVQLMSRRF 558



 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 36/122 (29%), Gaps = 2/122 (1%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   + AG  A P +  E A      G R W  +++P   P    G       A     +
Sbjct: 163 IFLTLRAGLRAIPQEVVEAARISGARGLRTWWQVVMPLTLPSLAAGTAITFVTALGNFGI 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +      +     L     +    G+     + +L M    +A+   L    +    R
Sbjct: 223 PAMLGIPAGYATLPTLVY--QKLAGMGTSVLAEVSILAMLIGAVAVTGILTQRFFQSRQR 280

Query: 584 CL 585
             
Sbjct: 281 VY 282


>gi|332968102|gb|EGK07189.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Desmospora sp. 8437]
          Length = 294

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 90/220 (40%), Gaps = 9/220 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLV---IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
             ++ RI   +F L+AF ++    G++  +L    +      +       +    +    
Sbjct: 3   AKVADRIATAVFYLIAFAIIGVLAGLLGFILVRGVQVIDWSFLTTPPSSVMAGGGIAPQL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +   +L  ++I++          A   K  +    +   ++++ S+P +    F ++ 
Sbjct: 63  FNSFYLLLLTLLITVPLGLGGGIYMAEYAKPNQWTRFIRLSIEVLSSLPSIVVGLFGLLI 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+         A  A    +F   +  M   + Q++ ++P + +E S +  ++ WQ    
Sbjct: 123 FVQYTGWGFSLAAGALALTVFNLPL--MVRVVEQAITSVPPEQKEASLALGVTHWQTITQ 180

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +P ++PG++   +++ +G  F   A+ M   G +  PL
Sbjct: 181 VILPAALPGILTGTILA-AGRVFGEAAALMFTAGMSSPPL 219



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
           ++      V+ G+   I  + +  I   F       V+  G I   +F    L+++  +I
Sbjct: 16  LIAFAIIGVLAGLLGFILVRGVQVIDWSFLTTPPSSVMAGGGIAPQLFNSFYLLLLTLLI 75

Query: 401 WIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+G+  G            +  I+   ++L++ P+     +VV               
Sbjct: 76  TVPLGLGGGIYMAEYAKPNQWTRFIRLSIEVLSSLPS-----IVVGLFGLLIFVQYTGWG 130

Query: 454 LLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +  G     +FN       V    ++ P + KE + +  +T W+    +ILP   P  
Sbjct: 131 FSLAAGALALTVFNLPLMVRVVEQAITSVPPEQKEASLALGVTHWQTITQVILPAALPGI 190

Query: 507 VTGAITACGGAWN 519
           +TG I A G  + 
Sbjct: 191 LTGTILAAGRVFG 203


>gi|320104863|ref|YP_004180454.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Isosphaera pallida ATCC 43644]
 gi|319752145|gb|ADV63905.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Isosphaera pallida ATCC 43644]
          Length = 550

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 8/131 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +  + +   + +P+ +    RP + + +   A L+   P+     L V  ++   +    
Sbjct: 31  LAALTLGGGLALPLAVASLNRPRLRAGLLGLASLVQTIPSLALLALAVPILAGLGVLIGR 90

Query: 451 WLSLLMIFGTQ--------WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
            L  L                +L N + G         E A    +T     R + LP  
Sbjct: 91  DLPTLGFLPALGALTLYGLLPVLRNTVTGLGGVDPQIVESARGLGMTDAAILRAVQLPLA 150

Query: 503 FPYYVTGAITA 513
            P  + GA TA
Sbjct: 151 APVILAGARTA 161



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 4/131 (3%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY----P 128
           L+A+ +        A  +    RL   L+ +  ++Q+IP L  L   V     L      
Sbjct: 31  LAALTLGGGLALPLAVASLNRPRLRAGLLGLASLVQTIPSLALLALAVPILAGLGVLIGR 90

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L A+ A+    +  +  +    L  +   + E +R   ++       + +P +
Sbjct: 91  DLPTLGFLPALGALTLYGLLPVLRNTVTGLGGVDPQIVESARGLGMTDAAILRAVQLPLA 150

Query: 189 MPGLVWNMMMS 199
            P ++     +
Sbjct: 151 APVILAGARTA 161


>gi|289435758|ref|YP_003465630.1| phosphate ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289172002|emb|CBH28548.1| phosphate ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 294

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 85/215 (39%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A ++V+ + ++L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVLIVVILASLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            +L  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLLITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALTAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPVL 219



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 73/208 (35%), Gaps = 25/208 (12%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCI 385
           + + +  +++  +      ++  +   +    +   V   ++                  
Sbjct: 1   MNVKTKDKIATGVFYAIAVLIVVILASLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGP 60

Query: 386 TMFRVVVLIIIASIIWIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVV 438
            ++    +++I  +I +P+    GI++      +          ++L++ P+     +VV
Sbjct: 61  EIWNSFYMLLITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGW 491
               +      +  S  +I G     +FN       V    +A PN  +E   +  ++ W
Sbjct: 116 GLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALTAIPNTQREAGLALGLSRW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
                +++P   P  +TG I A G  + 
Sbjct: 176 ETITRVLVPAALPAIITGVILAAGRVFG 203


>gi|316931521|ref|YP_004106503.1| binding-protein-dependent transporter inner membrane component
           [Rhodopseudomonas palustris DX-1]
 gi|315599235|gb|ADU41770.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris DX-1]
          Length = 257

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 13/204 (6%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             V      T     +  II  +I    G+  G R      +QP A +L   PA  +  +
Sbjct: 52  GQVGPALLETAGNAGLGWIIGVLIGSCAGMVAGLREEAQRALQPVAIILLGVPAIAWVVM 111

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWR 495
            +            W  ++ +      +LF     G  +       +A  + +       
Sbjct: 112 ALLWFGGR------WAVVVTVAAATGPMLFAAAMEGVRSLDGTLARMARVYQVPLSARLT 165

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +  P +  +     +T    +W  ++++E+ +         G+G  +A +       E 
Sbjct: 166 EVYGPQLLSHLFPALVTTLAMSWKVAVMAELLAG------AGGIGDGLATARAHVDTAET 219

Query: 556 VLGVLIMCCFVLALNRFLWHPLYL 579
           +  V+++   ++ ++  +  PL  
Sbjct: 220 MAWVVVVVGVLIVVDASVLQPLQR 243



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 92/268 (34%), Gaps = 23/268 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY------ASRTTLRM 72
                  ++ I ++  L         P  +  +      +  + +          T    
Sbjct: 6   RISWAWSLVGIVLLLALWEAGHRAYGPLILPSLGDTAATLWRMIRAGQVGPALLETAGNA 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +I +L       +A         L P+  I+  +P + ++   +++F   +   V 
Sbjct: 66  GLGWIIGVLIGSCAGMVAGLREEAQRALQPVAIILLGVPAIAWVVMALLWFGGRWAVVVT 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            A               M F+   + + ++   L  ++R +++    +   +  P  +  
Sbjct: 126 VAAATG----------PMLFAAAMEGVRSLDGTLARMARVYQVPLSARLTEVYGPQLLSH 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   ++ +++  W   V +E++          GIG  +A A    D    +  ++ ++GV
Sbjct: 176 LFPALVTTLAMSWKVAVMAELLAGAG------GIGDGLATARAHVDTAETMAWVVVVVGV 229

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIY 279
           + + D  + +P+      +R E  +G  
Sbjct: 230 LIVVDASVLQPLQRRLWLWRDEERSGRR 257


>gi|302383283|ref|YP_003819106.1| binding-protein-dependent transporters inner membrane component
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302193911|gb|ADL01483.1| binding-protein-dependent transport systems inner membrane
           component [Brevundimonas subvibrioides ATCC 15264]
          Length = 220

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--------AKSRRLGMVLVPILD 105
             +D   + +    T L +  AM ++++F      L         A +  L  VL  +++
Sbjct: 5   AEVDWPEILRATRDTLLMLFGAMALTVVFGIPLGVLLYLSGKGRLAANPVLNGVLSLVVN 64

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I++S+P +  L   +   + L    +      AI  +           +  +L  + + +
Sbjct: 65  ILRSVPFIILLIVMLPVTVILVGTSL--GVAGAIPPLVVGAAPFYARLVETALREVDKGV 122

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            E +++   S WQ      +P +MPG++  
Sbjct: 123 VEATQAMGGSTWQIVTRALLPEAMPGIIAG 152



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 12/151 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI--------GFRPHISSKIQPFAQLLA 426
           D   ++     T+  +   + +  +  IP+G+ +           P ++  +     +L 
Sbjct: 8   DWPEILRATRDTLLMLFGAMALTVVFGIPLGVLLYLSGKGRLAANPVLNGVLSLVVNILR 67

Query: 427 AFPANVFFPL---VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           + P  +   +   V   +    L     +  L++    +Y    V            E  
Sbjct: 68  SVPFIILLIVMLPVTVILVGTSLGVAGAIPPLVVGAAPFYARL-VETALREVDKGVVEAT 126

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +   + W+     +LP   P  + G     
Sbjct: 127 QAMGGSTWQIVTRALLPEAMPGIIAGGTVTA 157


>gi|260433013|ref|ZP_05786984.1| polyamine ABC transporter, permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416841|gb|EEX10100.1| polyamine ABC transporter, permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 424

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 75/221 (33%), Gaps = 25/221 (11%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--- 113
           D   L +   RT    L      +L  +  + L A        ++ IL ++     L   
Sbjct: 196 DKRILVKLFGRTLFMSLVITGACILLAYPVSYLLATQPTRVSNMLMILVLLPFWTSLLVR 255

Query: 114 -----------GFLTFTVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLC 159
                      G +  T+V+   +     +     ++  I A+    +  M   MY  + 
Sbjct: 256 TSAWKVMLQQQGVINDTLVWLGLVADDARLIIINNQIGTIIAMTHILLPFMILPMYSVMQ 315

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            IP      ++S   + W  FW +  P S+PG+    ++       + +  E++      
Sbjct: 316 TIPPSYTRAAKSMGATNWTTFWRIYFPQSIPGIGAGSILVFILAIGYYITPEIVGGTK-- 373

Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                 G +I+  I      ++ + +   LG I L   L+ 
Sbjct: 374 ------GVFISNRIAYHISSSLNWGLAAALGTILLAVVLIL 408



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N  +   + M      +++  + +     P  +   A S   T 
Sbjct: 273 LVWLGLVADDARLIIINNQIGTIIAMTHILLPFMILPMYSVMQTIPPSYTRAAKSMGATN 332

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  I  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 333 WTTFWRIYFPQSIPGIGAGSILVFILAIGYYITPEIVGGTKGVFISNRIAYHISSSLNWG 392

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ +
Sbjct: 393 ----LAAALGTILLAVVLI 407


>gi|116671387|ref|YP_832320.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116611496|gb|ABK04220.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
          Length = 236

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 70/184 (38%), Gaps = 12/184 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A +  +  +  MV+ L  +   A  A ++R L  V+V    ++ ++P L          +
Sbjct: 15  AGQHLVLAIVPMVLGLALSIPLAQFARRNRTLRSVVVTATSLLYTVPSLALFII-----L 69

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G  +   +  I A+    V  +  +   +  ++  DL + + +       +F  + 
Sbjct: 70  PSILGTRVLDPVNVIVALTIYAVALLVRAALDAFDSVDEDLRQAAVAMGFKPGARFLQID 129

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P L   + +        V  + ++ +G+       +G      ++   +  ++  
Sbjct: 130 LPLSLPVLFAGLRVVSVSNISLVSVAALLGIGN-------LGMLFTSGLQRGFITEVVVG 182

Query: 245 MLTM 248
           ++ +
Sbjct: 183 IIAI 186



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 8/191 (4%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
              +   V  L    +   +V +++   + IP+  +      + S +     LL   P+ 
Sbjct: 4   FLANSGRVFELAGQHLVLAIVPMVLGLALSIPLAQFARRNRTLRSVVVTATSLLYTVPSL 63

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             F ++ S +    L+P   +  L I+     ++   +    +   D ++ A +      
Sbjct: 64  ALFIILPSILGTRVLDPVNVIVALTIYAVA-LLVRAALDAFDSVDEDLRQAAVAMGFKPG 122

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
             +  I LP   P    G         +   V+ +   G+       LG       ++G 
Sbjct: 123 ARFLQIDLPLSLPVLFAGLRVVSVSNISLVSVAALLGIGN-------LGMLFTSGLQRGF 175

Query: 552 FPEVVLGVLIM 562
             EVV+G++ +
Sbjct: 176 ITEVVVGIIAI 186


>gi|323496507|ref|ZP_08101565.1| phosphate ABC transporter, permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323318784|gb|EGA71737.1| phosphate ABC transporter, permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 293

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 32  KERIFHGLFLASAVIGIVSLAIIAYFIVKESIPAFQEAGVSGIVLGQDWLPPALYGVATM 91

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 92  IVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 152 IVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIY 211

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 212 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 15/176 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 78  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLA 137

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +       N  L   +++       ++        A P  
Sbjct: 138 GIPSVVYGFFGLVIIVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRT 197

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +KE + +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 198 YKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 253


>gi|15603594|ref|NP_246668.1| hypothetical protein PM1729 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12722143|gb|AAK03813.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 229

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T      A + +++       LA          +RR   VL  I++I +S+P    L
Sbjct: 25  TLETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVIINIGRSVP-FIIL 83

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 84  LIILLPFTRLVVGTTLGTT-AAIVPLSVSAIPFFARLTANALLEIPSGLTEAAKSMGATN 142

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 143 WQIVTKYYLPESIPILINGITLTL 166



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 44/165 (26%), Gaps = 14/165 (8%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPH 413
           Q         T +    V      T++   +  + A +I +P+G+         I     
Sbjct: 4   QLWADFTQEMTPRIWELVGLSTLETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRR 63

Query: 414 ISSKIQPFAQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
            +  +     +  + P      +  P     V          + L +     +  L    
Sbjct: 64  ANQVLNVIINIGRSVPFIILLIILLPFTRLVVGTTLGTTAAIVPLSVSAIPFFARL--TA 121

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
                 P+   E A S   T W+      LP   P  + G     
Sbjct: 122 NALLEIPSGLTEAAKSMGATNWQIVTKYYLPESIPILINGITLTL 166


>gi|319651560|ref|ZP_08005687.1| phosphate ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317396627|gb|EFV77338.1| phosphate ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 318

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 62/147 (42%), Gaps = 6/147 (4%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T + ML A+ + L+     +  A  S +    L P+L+I+  IP + +  F  
Sbjct: 95  LTGTIISTLIAMLVAIPVGLMTAIFLSEYA--SEKTRKALKPLLEILAGIPTIVYGFFAF 152

Query: 121 VYFMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSG 176
            +   L    + G E   I     +    +  M  S+   ++ ++P  + E + +   + 
Sbjct: 153 TFVTPLLRSFIPGLEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNAMREGALALGATK 212

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +  W + VP ++ G++ + ++ +S  
Sbjct: 213 LEVTWKVVVPAAISGIIASFVLGISRA 239



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 80/226 (35%), Gaps = 31/226 (13%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF----FPL 436
           +   ++  +IA ++ IPVG+                 ++P  ++LA  P  V+    F  
Sbjct: 95  LTGTIISTLIAMLVAIPVGLMTAIFLSEYASEKTRKALKPLLEILAGIPTIVYGFFAFTF 154

Query: 437 VVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVI----AGASAFPNDFKEVASSFHITG 490
           V   +  +   L P   LS  ++ G    I+  V        S+ PN  +E A +   T 
Sbjct: 155 VTPLLRSFIPGLEPTNILSPGIVMGIM--IIPMVASLSEDAMSSVPNAMREGALALGATK 212

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIA 544
                 +++P      +   +     A   +++  +AS         +      + AYI 
Sbjct: 213 LEVTWKVVVPAAISGIIASFVLGISRAIGETMIVTIASGSSKNFTFDVTQSMQTMTAYIV 272

Query: 545 EST----EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           E T      G+     L  + M  FV  L   L   L  Y +R  R
Sbjct: 273 EVTGGEAAAGTTLYYSLYAVAMTLFVFTLIMNL---LAQYISRKFR 315


>gi|218710347|ref|YP_002417968.1| putative D-methionine transport system permease MetI [Vibrio
           splendidus LGP32]
 gi|218323366|emb|CAV19543.1| Probable D-methionine transport system permease protein metI
           [Vibrio splendidus LGP32]
          Length = 227

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           I+L+ + L +    T   +  A ++          +   +++        L  +L  I++
Sbjct: 12  ISLNGNLLLEATGETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAIVN 71

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 72  VGRSVPFLVLM-VAIIPLTKMLIGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 129

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 130 VEAAQSMGATPTQIINKVLLPEALPTIINSVTITL 164



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 67/211 (31%), Gaps = 21/211 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  I+   + IP+G+ +      G      ++  +     +  + P  V     
Sbjct: 26  TLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAIVNVGRSVPFLVLMVAI 85

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    +  +       + L +  G   ++   + +     P    E A S   T  + 
Sbjct: 86  IPLTKMLIGTFIGTTAAIVPLTI--GAIPFVARLIESALLEVPTGLVEAAQSMGATPTQI 143

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  +           + S ++     G +       G +  + T      
Sbjct: 144 INKVLLPEALPTIINSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDVT------ 197

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++   ++M   ++ + + +   L       
Sbjct: 198 -IMAVTVVMLIVLVQIIQSIGDSLVRRVDHR 227


>gi|148380481|ref|YP_001255022.1| phosphate ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933987|ref|YP_001384705.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934474|ref|YP_001388226.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A str. Hall]
 gi|148289965|emb|CAL84078.1| putative phosphate transport system permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152930031|gb|ABS35531.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930388|gb|ABS35887.1| phosphate ABC transporter, permease protein PstC [Clostridium
           botulinum A str. Hall]
 gi|322806794|emb|CBZ04363.1| phosphate transport system permease protein PstC (TC 3.A.1.7.1)
           [Clostridium botulinum H04402 065]
          Length = 307

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           +T   + A+++S   +   A        +    VL P L++   IP +  G+L  +++  
Sbjct: 91  STFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G    + LA I  +    +  +      ++  +P+   + S     + WQ    
Sbjct: 151 IIKRIYGGTGFSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISN 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + VP +  G++  +++ ++  +   +A +M++      P
Sbjct: 211 VIVPSAKDGILTGIILGLARAFGEALAVQMVIGNSIQFP 249



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII--- 400
           L I +F  + G+A+     S+   +    +     V   G +        + I ++I   
Sbjct: 44  LSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSA 103

Query: 401 --WIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNL 450
              I + I+I    P +    ++P  +L    P+ V+  L +S +       Y     ++
Sbjct: 104 PVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRIYGGTGFSI 163

Query: 451 WLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++++       + ++ +      P  + + +     T W+    +I+P      +TG
Sbjct: 164 LAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTG 223

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGL 539
            I     A+  ++  ++     I      L
Sbjct: 224 IILGLARAFGEALAVQMVIGNSIQFPNKLL 253


>gi|15673700|ref|NP_267874.1| phosphate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281492309|ref|YP_003354289.1| phosphate ABC transporter permease [Lactococcus lactis subsp.
           lactis KF147]
 gi|12724736|gb|AAK05816.1|AE006402_4 phosphate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281375973|gb|ADA65464.1| Phosphate ABC transporter, permease protein [Lactococcus lactis
           subsp. lactis KF147]
 gi|326407184|gb|ADZ64255.1| phosphate ABC transporter permease [Lactococcus lactis subsp.
           lactis CV56]
          Length = 297

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 73/185 (39%), Gaps = 6/185 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++  +L   +  IL+ G+         +      L    +      +   ++  ++IS+
Sbjct: 19  GIIVLILAFLLAYILIKGLPVIFKDPKFIITASNPLTGGGIAVQLFNSVYLLIVTLIISV 78

Query: 81  LFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             +          A +   L  V+   ++++ S+P +    F ++ F+  +         
Sbjct: 79  PLSLGAGIYLSEYANQKHWLTGVVRSAIEVLSSLPSIVVGLFGMLIFVLQFGLGFSVLSG 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A    +F   +  MT ++ +SL  IP    E   +  +S W+    + +P ++PG++  +
Sbjct: 139 ALALTVFNLPL--MTRNVEESLRAIPTSQREGGLALGMSRWETATQVILPAAVPGIITGV 196

Query: 197 MMSMS 201
           ++S  
Sbjct: 197 ILSSG 201



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 74/186 (39%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  ++  F    +    + + ++   +I+          +      +++ ++V +II+  
Sbjct: 20  IIVLILAFLLAYILIKGLPVIFKDPKFIITASNPLTGGGIAVQLFNSVYLLIVTLIISVP 79

Query: 400 IWIPVGIWIGFRP----HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
           + +  GI++         ++  ++   ++L++ P+ V   F +++  + +      L  +
Sbjct: 80  LSLGAGIYLSEYANQKHWLTGVVRSAIEVLSSLPSIVVGLFGMLIFVLQFGLGFSVLSGA 139

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       +  NV     A P   +E   +  ++ W     +ILP   P  +TG I +
Sbjct: 140 LALTVFNLPLMTRNVEESLRAIPTSQREGGLALGMSRWETATQVILPAAVPGIITGVILS 199

Query: 514 CGGAWN 519
            G  + 
Sbjct: 200 SGRVFG 205


>gi|302186273|ref|ZP_07262946.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 214

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAAGINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +             I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAAGINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|33592555|ref|NP_880199.1| ABC transporter permease [Bordetella pertussis Tohama I]
 gi|33572201|emb|CAE41748.1| probable permease component of ABC transporter [Bordetella
           pertussis Tohama I]
 gi|332381973|gb|AEE66820.1| ABC transporter permease [Bordetella pertussis CS]
          Length = 564

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/514 (14%), Positives = 157/514 (30%), Gaps = 63/514 (12%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIG 133
           + +++ L     A    +    G +L+  L ++  I P         + F       ++ 
Sbjct: 70  SSLLASLIAVPLAYFTVRFEFRGALLIQTLGVLPLIMPPFVGAVAMQLIFGRSGSVNLLL 129

Query: 134 AEL------------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +               IF         +  ++  +L NI   +EE + +    G++ F 
Sbjct: 130 DDWLGITLPFMDGLNGVIFVESLHYFPFILMNLVVALRNIDGSMEEAAFNLGSRGFRLFC 189

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++PG +     S+     F      +V+G T +  P   +Y+ +     +    
Sbjct: 190 RIIFPLALPGYLAG--TSLVFVKVFDDLGTPLVLGTTNMLAP--QAYLRITQVGLEDPLG 245

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
               + M+G   L   L  R +     K       G        L          +IG  
Sbjct: 246 YVISVIMIGFSILALWLSARVL---KGKDYSTLQKGGNAIHKRRLRPVESMLAYAWIGAV 302

Query: 302 SWNFFSP----LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                SP    L  ++  +     +   +   ++  + +  +      + +  +  GV +
Sbjct: 303 LLLVLSPHLGVLLLSLASVWSYAPLPDGYTLAHYTAVFTESQGMIANTLLYCGLAAGVDV 362

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISS 416
            +       ++                    R  +  I ++ + IP + + IG+      
Sbjct: 363 VLGTAIAYLMLRTRLPA--------------RQWLDFIASAALAIPGIVLAIGYLRTFRG 408

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASA 474
              P                         L  + W+ +++ +      Y L + +A    
Sbjct: 409 VEIP---------------------GTGVLLTSSWVLIMIAYSVRRLPYALRSCVAALQQ 447

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +E A S   +  R  R I++P +    + G +T+   A      + +        
Sbjct: 448 INVSLEEAAESLGASRLRTIRRIVVPLMAGGMLAGFVTSFITAAVELSATIMLVTRDSQA 507

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             +  G Y+   +  G  P   LGVL +    + 
Sbjct: 508 PMS-YGIYLYMQSAAGRGPGAALGVLAVVAVGIG 540


>gi|325002031|ref|ZP_08123143.1| quaternary amine ABC transporter permease [Pseudonocardia sp. P1]
          Length = 263

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 16/179 (8%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
            + ++G++ +  +   +     +   I P  L V  L ++   T L    + ++ ++   
Sbjct: 34  LIALVGLVGVFAYAGSQGLDAVEQSVINPAALAVR-LWEHMILTGL----STLVVIVIAI 88

Query: 85  VYATLAAKSRRLGMVLVPIL---DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                 ++    G +  P+L     MQ++P  G     ++ F  L  G        A+ A
Sbjct: 89  PAGIAISR-PAAGRIQRPVLAGAGFMQALPAFG--VIVLLAFSPLGLGLPTAVVALALAA 145

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +          +    L  + R L E +R   +S  Q    + +P + P +V  + +++
Sbjct: 146 LLPVLT-----NTVVGLQQVDRSLIEAARGIGMSARQTLIRVELPLATPVMVAGVRVAL 199



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 58/194 (29%), Gaps = 3/194 (1%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +     + GV      Q +  +         L V     + +  +  L++I  +I IP G
Sbjct: 34  LIALVGLVGVFAYAGSQGLDAVEQSVINPAALAVRLWEHMILTGLSTLVVI--VIAIPAG 91

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
           I I  RP      +P         A   F ++V               + +       +L
Sbjct: 92  IAI-SRPAAGRIQRPVLAGAGFMQALPAFGVIVLLAFSPLGLGLPTAVVALALAALLPVL 150

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            N + G         E A    ++  +    + LP   P  V G   A       + ++ 
Sbjct: 151 TNTVVGLQQVDRSLIEAARGIGMSARQTLIRVELPLATPVMVAGVRVALVLNVGTAALAT 210

Query: 526 VASWGHIHLRTTGL 539
               G +     G+
Sbjct: 211 FIGAGGLGEPIKGM 224


>gi|313631987|gb|EFR99105.1| phosphate ABC transporter, permease protein PstA [Listeria
           seeligeri FSL N1-067]
 gi|313636358|gb|EFS02140.1| phosphate ABC transporter, permease protein PstA [Listeria
           seeligeri FSL S4-171]
          Length = 294

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 85/215 (39%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A ++V+ + ++L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVLIVVILASLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            +L  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLLITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALTAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPVL 219



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 73/208 (35%), Gaps = 25/208 (12%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCI 385
           + + +  +++  +      ++  +   +    +   V   ++                  
Sbjct: 1   MNVKTKDKIATGVFYAIAVLIVVILASLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGP 60

Query: 386 TMFRVVVLIIIASIIWIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVV 438
            ++    +++I  +I +P+    GI++      +          ++L++ P+     +VV
Sbjct: 61  EIWNSFYMLLITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGW 491
               +      +  S  +I G     +FN       V    +A PN  +E   +  ++ W
Sbjct: 116 GLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALTAIPNTQREAGLALGLSRW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
                +++P   P  +TG I A G  + 
Sbjct: 176 ETITRVLVPAALPAIITGVILAAGRVFG 203


>gi|153854794|ref|ZP_01996028.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814]
 gi|149752701|gb|EDM62632.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814]
          Length = 630

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 4/149 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L+   +    S T    L A  IS +   + A   +KS+    ++  +++   ++PI+  
Sbjct: 53  LESADMMDALSTTFSIALLATFISTVAGTIAAIGVSKSK---KLIRDLMEQANNLPIMNP 109

Query: 116 LTFTVVYFMNLYPG-KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              T + FM L+    V    +  + A     +  +  S+   + ++  +L + +     
Sbjct: 110 EIVTAIGFMLLFITFHVEKGYVTMLLAHIAFCIPYVMLSVMPKIKSLDPNLADAAMDLGA 169

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           + WQ    + VP   PG+V   +++ +  
Sbjct: 170 TPWQALTKVVVPQITPGIVAGALIAFTMS 198



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ------PFAQLLAAFPANVFFPLVVS 439
           T    ++   I+++      I +     +   +       P        P  V     + 
Sbjct: 65  TFSIALLATFISTVAGTIAAIGVSKSKKLIRDLMEQANNLPIMN-----PEIVTAIGFML 119

Query: 440 CVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +H+       LL  I     Y++ +V+    +   +  + A     T W+    ++
Sbjct: 120 LFITFHVEKGYVTMLLAHIAFCIPYVMLSVMPKIKSLDPNLADAAMDLGATPWQALTKVV 179

Query: 499 LPGIFPYYVTGAITA 513
           +P I P  V GA+ A
Sbjct: 180 VPQITPGIVAGALIA 194


>gi|312793343|ref|YP_004026266.1| phosphate ABC transporter inner membrane subunit PstC
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312877063|ref|ZP_07737036.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796204|gb|EFR12560.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|312180483|gb|ADQ40653.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 284

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ +F F     +       +               +  +   +++  V  III   I I
Sbjct: 25  LITVFIFKEGFAIIKEYGLWNFILGKKWAPLSGKFGIFPMILGSIYVTVGAIIIGVPIGI 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  I+PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVNEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLIRKYLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +   
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKIPNN 228



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 65/157 (41%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           T   ++  + I +        L   + ++  ++ P ++++  IP +  GF    VV  + 
Sbjct: 72  TVGAIIIGVPIGIATAIFLGELV--NEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G  + A   I    +     ++ + S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKYLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  G++ ++++ M       +A  M+      IP
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|262168996|ref|ZP_06036690.1| phosphate transport system permease protein PstC [Vibrio cholerae
           RC27]
 gi|262022695|gb|EEY41402.1| phosphate transport system permease protein PstC [Vibrio cholerae
           RC27]
          Length = 306

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS----- 66
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP         
Sbjct: 28  KERIFHGLFMTSAVIGILSLAIIAYFIVRESIPAFQEAGVTGIVLGQDWLPPALFGVATM 87

Query: 67  --RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 88  IVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 147

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    +++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 148 IVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 207

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 208 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALFGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+    +    N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQDVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|15807805|ref|NP_285460.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6460518|gb|AAF12224.1|AE001862_50 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 484

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A+FA+    +  +  + +  L  +P  + + +R   ++  Q  W   +P ++P +   
Sbjct: 349 APALFALTLYALLPIVVNTFVGLRGVPPGIPDAARGLGMTPAQVLWRAELPVALPYIFEG 408

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +  ++   +     + +I  G       G+G +I   ++      +L   L ++ +
Sbjct: 409 LRSALVLTFGITTIAALIGAG-------GLGFFIQRGVEGNVPDLVLLGALPIVLI 457



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 42/131 (32%), Gaps = 10/131 (7%)

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL    V      P L+   L        I+ N   G    P    + A    +T  +  
Sbjct: 337 PLASWGVRGIGAAPALFALTLY---ALLPIVVNTFVGLRGVPPGIPDAARGLGMTPAQVL 393

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
               LP   PY   G  +A    +  + ++ +   G       GLG +I    E      
Sbjct: 394 WRAELPVALPYIFEGLRSALVLTFGITTIAALIGAG-------GLGFFIQRGVEGNVPDL 446

Query: 555 VVLGVLIMCCF 565
           V+LG L +   
Sbjct: 447 VLLGALPIVLI 457


>gi|304389761|ref|ZP_07371720.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326937|gb|EFL94176.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 357

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRR------LGMVLVPILDIMQSIPILGF----LTFTVVY 122
           L    + L     +A  AA             +  P +++   IP + +    LT  V +
Sbjct: 138 LMTCFLGLAIATPFAVGAAVFITEIAPCAGERLFRPAVELFLGIPSVVYGWVGLTVLVPF 197

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
             + +   + G  + A   +    ++  +T     ++  +P    E +     + WQ  +
Sbjct: 198 IRDYFHAPLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPDHYREAAYGLGATRWQSIY 257

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++ +P +  G++  +++ ++  +   +A  M++     +P 
Sbjct: 258 HIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPA 298



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 24/226 (10%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI--SSKIQPFAQLLA 426
              T +  +  +     ++    + + IA+   +   ++I            +P  +L  
Sbjct: 120 PDLTLRGSVGALIFILGSLMTCFLGLAIATPFAVGAAVFITEIAPCAGERLFRPAVELFL 179

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
             P+ V+         P +           ++  + +++    +  +  V     +A P+
Sbjct: 180 GIPSVVYGWVGLTVLVPFIRDYFHAPLGGYSVLAAGIVLAVMIFPTITTVSADAITAVPD 239

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-- 535
            ++E A     T W+   +I+LP      +TG I     A+  ++   +       L   
Sbjct: 240 HYREAAYGLGATRWQSIYHIVLPAARKGILTGIILGLARAFGEALAVAMVIGKTRALPAD 299

Query: 536 --------TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                   TT + A +  +T  G     +     M   +  ++ F 
Sbjct: 300 ILSPTSSLTTAITADMGNTTNGGEHNSALW---TMALLLFLISMFF 342


>gi|294678376|ref|YP_003578991.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294477196|gb|ADE86584.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 239

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 85/232 (36%), Gaps = 19/232 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           +S RI+P    L  F L   +    L        P  + +   +  +   + Q+A  T  
Sbjct: 1   MSARIWP---VLAIFALWQAVCAAALVPAFVLPPPLRVFET--LWHERGLIGQHALTTLA 55

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              + + + +      A   A +  L  ++ P+L   Q++P+       V++       K
Sbjct: 56  ETGAGLALGIGLGVTLALAMALAPWLQRLIGPVLAGAQALPVFVLAPVLVLWLGYGLGPK 115

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V    L  +F + +         ++  LC  P  + +++R  R S  +   +L +P ++P
Sbjct: 116 VAMVALLVVFPVAS--------GLHDGLCATPAAVLDLARIARASRLRTLLWLRLPHALP 167

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
                + ++++      V  E +          G+G  + +A     +  + 
Sbjct: 168 QGAAGLRIAVTYAPTGAVIGEWVGASQ------GLGYLMLMANARMRIDLMF 213



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 10/214 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            +   W  V     +          V    + +   +      T+      + +   + +
Sbjct: 10  AIFALWQAVCAAALVPAFVLPPPLRVFETLWHERGLIGQHALTTLAETGAGLALGIGLGV 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
            + + +   P +   I P      A P  V  P++V  + Y        ++LL++F    
Sbjct: 70  TLALAMALAPWLQRLIGPVLAGAQALPVFVLAPVLVLWLGYGLGPKVAMVALLVVF---- 125

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   +  G  A P    ++A     +  R   ++ LP   P    G   A   A   ++
Sbjct: 126 PVASGLHDGLCATPAAVLDLARIARASRLRTLLWLRLPHALPQGAAGLRIAVTYAPTGAV 185

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           + E          + GLG  +  +  +     + 
Sbjct: 186 IGEWVG------ASQGLGYLMLMANARMRIDLMF 213


>gi|239831070|ref|ZP_04679399.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
 gi|239823337|gb|EEQ94905.1| binding-protein-dependent transport systems inner membrane
           component [Ochrobactrum intermedium LMG 3301]
          Length = 251

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 15/155 (9%)

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
             +++I Q+ P +  L   V  F           +   + A+F   +  +  +    L  
Sbjct: 90  RSLVNIGQTFPPVAVLALAVPIFG--------FGDKPTLIALFLYGLLPIFENTLTGLTT 141

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P  + E +R   ++  Q+   + VP +MP ++  + +S        V S       + +
Sbjct: 142 LPSPVVEAARGMGMTSAQRLVKIEVPLAMPVILAGIRLS-------AVISLATATIGSTV 194

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
               +G  I   +   +L  +L   L +  +  L 
Sbjct: 195 AARTLGEVIIAGLISNNLAFVLQGGLVVAALAILI 229



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V    +      + L L  +      I  N + G +  P+   
Sbjct: 92  LVNIGQTFPPVAVLALAVPIFGFGDKPTLIALFLYGLL----PIFENTLTGLTTLPSPVV 147

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A    +T  +    I +P   P  + G   +        ++S   +     +    LG
Sbjct: 148 EAARGMGMTSAQRLVKIEVPLAMPVILAGIRLSA-------VISLATATIGSTVAARTLG 200

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I       +   V+ G L++    + +
Sbjct: 201 EVIIAGLISNNLAFVLQGGLVVAALAILI 229


>gi|254385653|ref|ZP_05000976.1| ABC transporter permease [Streptomyces sp. Mg1]
 gi|194344521|gb|EDX25487.1| ABC transporter permease [Streptomyces sp. Mg1]
          Length = 224

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+W+G      +     + +  A P      L +        N    ++L++      
Sbjct: 47  PVGLWLGHLGKGGALAVNISNVGRAIPVFAVLALFMVSPLRGWGNVPTIVALVLF--ALP 104

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +L N   G         E A    ++G + +  + LP      +TG  +A       + 
Sbjct: 105 PLLTNAYVGMREVDRSVVEAARGMGMSGGQLFLRVELPLARALVMTGVRSAAVQVIATAT 164

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           ++ +   G       GLG  I       +  +V  G
Sbjct: 165 IAAMVGQG-------GLGRIITAGFNTYNTAQVFAG 193



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 20/185 (10%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                     + G + V I ++ ++IP+       V+    + P +  G  +  I A+  
Sbjct: 47  PVGLWLGHLGKGGALAVNISNVGRAIPVFA-----VLALFMVSPLRGWG-NVPTIVALVL 100

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             +  +  + Y  +  + R + E +R   +SG Q F  + +P +   ++  +  +     
Sbjct: 101 FALPPLLTNAYVGMREVDRSVVEAARGMGMSGGQLFLRVELPLARALVMTGVRSAAVQVI 160

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML-------GVIFLYDQ 257
                + M+  G       G+G  I       +   +    L +        G +   D+
Sbjct: 161 ATATIAAMVGQG-------GLGRIITAGFNTYNTAQVFAGALLVALLALVVEGALVAADR 213

Query: 258 LLFRP 262
           LL R 
Sbjct: 214 LLPRR 218


>gi|182438403|ref|YP_001826122.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466919|dbj|BAG21439.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 215

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 67/206 (32%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++     L   A +    +   MVI+ +   V   ++ +S   G + +     + +IP L
Sbjct: 7   LSTRHQQLLTDAFQHVSAVFQCMVIATVLGVVIGVVSYRSGWGGSLAITSTATILTIPSL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                       L P   +G     I       +  +  +    L  +   L + +    
Sbjct: 67  A-------AIGLLIPLVGLGVAPTVITLTLYGLL-PIVRNSIVGLRGVDPSLVDAATGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S   +   + +P + P ++  + ++ +     + A      G      PG+G+ I   I
Sbjct: 119 MSRLARLCRVELPLAWPPILTGIRVA-TQMLMGIAAIAAYASG------PGLGNEIFRGI 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                   +  +L     I +   + 
Sbjct: 172 ASLGSANAINQVLAGTLGIVILALIF 197



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA+++ + +G+         S        +   P+     L++  V        
Sbjct: 25  VFQCMVIATVLGVVIGVVSYRSGWGGSLAITSTATILTIPSLAAIGLLIPLVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A+   ++       + LP  +P  +TG
Sbjct: 85  ITLTLYGLL----PIVRNSIVGLRGVDPSLVDAATGIGMSRLARLCRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              A       + ++  AS   +      +   IA      +  +V+ G L +    L  
Sbjct: 141 IRVATQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSANAINQVLAGTLGIVILALIF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|116512571|ref|YP_811478.1| ABC-type phosphate transport system, permease component
           [Lactococcus lactis subsp. cremoris SK11]
 gi|125624681|ref|YP_001033164.1| phosphate transport system permease protein pstC [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|116108225|gb|ABJ73365.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Lactococcus lactis subsp. cremoris SK11]
 gi|124493489|emb|CAL98467.1| phosphate transport system permease protein pstC [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071475|gb|ADJ60875.1| phosphate ABC transporter, permease protein PstA [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 297

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 73/185 (39%), Gaps = 6/185 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++  +L   +  IL+ G+         +      L    +      +   ++  ++IS+
Sbjct: 19  GIIVLILAFLLAYILVKGLPVIFKDPKFIITASNPLTGGGIAVQLFNSVYLLIVTLIISV 78

Query: 81  LFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             +          A +   L  V+   ++++ S+P +    F ++ F+  +         
Sbjct: 79  PLSLGAGIYLSEYANQKHWLTGVVRSAIEVLSSLPSIVVGLFGMLIFVLQFGLGFSVLSG 138

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A    +F   +  MT ++ +SL  IP    E   +  +S W+    + +P ++PG++  +
Sbjct: 139 ALALTVFNLPL--MTRNVEESLRAIPTSQREGGLALGMSRWETATQVILPAAVPGIITGV 196

Query: 197 MMSMS 201
           ++S  
Sbjct: 197 ILSSG 201



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 74/186 (39%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +  ++  F    +    + + ++   +I+          +      +++ ++V +II+  
Sbjct: 20  IIVLILAFLLAYILVKGLPVIFKDPKFIITASNPLTGGGIAVQLFNSVYLLIVTLIISVP 79

Query: 400 IWIPVGIWIGFRP----HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
           + +  GI++         ++  ++   ++L++ P+ V   F +++  + +      L  +
Sbjct: 80  LSLGAGIYLSEYANQKHWLTGVVRSAIEVLSSLPSIVVGLFGMLIFVLQFGLGFSVLSGA 139

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       +  NV     A P   +E   +  ++ W     +ILP   P  +TG I +
Sbjct: 140 LALTVFNLPLMTRNVEESLRAIPTSQREGGLALGMSRWETATQVILPAAVPGIITGVILS 199

Query: 514 CGGAWN 519
            G  + 
Sbjct: 200 SGRVFG 205


>gi|310817205|ref|YP_003965169.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308755940|gb|ADO43869.1| binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 557

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 81/567 (14%), Positives = 182/567 (32%), Gaps = 65/567 (11%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++A   +  ++  +   +   ++      +     D   L      T L  ++  ++S L
Sbjct: 22  VVAVPFLFILLQAVYPQLGRGSLAAPFSALAAAFADPK-LIGMTGNTLLLGVAVALLSAL 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQ-----SIPILGFLTFT-----VVYFMNLYPGKV 131
                A + A  R  G +L  +L ++       I  LG++        +   +       
Sbjct: 81  VAVPLAVMRALFRVPGALLWDVLFLIPFMIPPYIATLGWIMTLQPRGYLYQLLGFDLAGF 140

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           + +    +F +  +    + F++ +++  +     +V R F  +  + FW + +P S PG
Sbjct: 141 LFSVPGIVFVMMLNAFPVIYFAVSRTVEAVGARYADVGRVFGATPLRAFWRITLPLSTPG 200

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG---IGSYIALAIKEQDLLAILYAMLTM 248
           L  ++++       F +A E       +    G   + + I L + +  +     A+L++
Sbjct: 201 LAASLLL------VFSMAIEEYGTPAALGRRAGFDVLVTAIDLRVSDWPIDLPGAAILSL 254

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308
           + V   +   L +  I+    ++         A                           
Sbjct: 255 VLVALSFGAFLLQRWILTRKNWQTTTGKPQGGAK-------------------------- 288

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
                    R LG         F  +     +  +L I    +   ++ G+AWQ++G   
Sbjct: 289 ---------RALGPWTVPVVALFALVGFVATILPLLAILATALSRTISGGLAWQNMGLNN 339

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AA 427
                 D    +     ++   V   + A ++       +         +     +L +A
Sbjct: 340 FAAILTDSTGALRALGTSLTLGVATALFAGLLGAVSAYAVVKSRARGRGLLDVLTILPSA 399

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-----VIAGASAFPNDFKEV 482
            P  V    ++   +   L    + ++ ++      IL         A      ++ +  
Sbjct: 400 LPGIVVAVGLILAWNQPWLPMTPYNTVFILLLAYCCILLPQPVRYATAAFHQVGDNLEAA 459

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A  F       +R I+LP I P  +   +     A    + S V +   +   +T    Y
Sbjct: 460 ARVFGARPMVAFRRILLPLIAPSLLASMLLVFAVATRELVASVVVAPVGVRTIST----Y 515

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I    E+GS    +    +      AL
Sbjct: 516 IWRQFEQGSVGLGMAMAFVTIIITTAL 542


>gi|254718180|ref|ZP_05179991.1| phosphate ABC transporter, permease protein PstA [Brucella sp.
           83/13]
 gi|265983137|ref|ZP_06095872.1| phosphate ABC transporter [Brucella sp. 83/13]
 gi|306837694|ref|ZP_07470563.1| phosphate ABC transporter, permease protein PstA [Brucella sp. NF
           2653]
 gi|264661729|gb|EEZ31990.1| phosphate ABC transporter [Brucella sp. 83/13]
 gi|306407252|gb|EFM63462.1| phosphate ABC transporter, permease protein PstA [Brucella sp. NF
           2653]
          Length = 436

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 56/148 (37%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
            SL      +   ML  + +SL      +      A+  R   ++   ++ + ++P + F
Sbjct: 212 SSLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVF 271

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
               +  F+N + G    A L     +    +  +  +   +L  +P  +   +     S
Sbjct: 272 GLLGLAVFINFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGAS 330

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q  ++  +P + PG++   ++ ++  
Sbjct: 331 KTQMVFHHVLPLAAPGILTGTIIGLAHA 358



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSSLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|118473767|ref|YP_890548.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118175054|gb|ABK75950.1| ABC transporter, permease protein ProZ [Mycobacterium smegmatis
           str. MC2 155]
          Length = 268

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 11/202 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ +I     +     +       +    V +  +++I +P+G+ IG     +  +   
Sbjct: 6   QALAFIFTAENWAGPSGLGARIVEHLEYTAVAVFFSALIAVPLGMVIGHTGRGTFLVVTG 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V       + P + L LL I      +L    AG +       +
Sbjct: 66  VNALRALPTLGVLLLGVLLWGLGLVPPTVALMLLGIP----PLLAGTYAGVANVERTVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A S  +T  R    + +P   P  + G  T+       ++     +    +    GLG 
Sbjct: 122 AARSMGMTESRILLRVEVPNALPLILGGLRTS-------TLQIVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMC 563
           Y+ +  +   F   ++G +++ 
Sbjct: 175 YLIDGIKIREFHIALVGAIMVT 196



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 15/191 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L             A+  S L       +   + R   ++V  ++ ++++P      
Sbjct: 20  PSGLGARIVEHLEYTAVAVFFSALIAVPLGMVIGHTGRGTFLVVTGVNALRALP------ 73

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +  + L         +    A+    +  +    Y  + N+ R + + +RS  ++  
Sbjct: 74  --TLGVLLLGVLLWGLGLVPPTVALMLLGIPPLLAGTYAGVANVERTVVDAARSMGMTES 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           +    + VP ++P ++  +  S        +             L G+G Y+   IK ++
Sbjct: 132 RILLRVEVPNALPLILGGLRTS-------TLQIVATATVAAYASLGGLGRYLIDGIKIRE 184

Query: 238 LLAILYAMLTM 248
               L   + +
Sbjct: 185 FHIALVGAIMV 195


>gi|15923453|ref|NP_370987.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926140|ref|NP_373673.1| hypothetical protein SA0421 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651344|ref|YP_185393.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161549|ref|YP_493149.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194217|ref|YP_499009.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148266921|ref|YP_001245864.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|150392967|ref|YP_001315642.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|151220639|ref|YP_001331461.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156978791|ref|YP_001441050.1| hypothetical protein SAHV_0460 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|221140302|ref|ZP_03564795.1| hypothetical protein SauraJ_01556 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315741|ref|ZP_04838954.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005256|ref|ZP_05143857.2| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|258413442|ref|ZP_05681717.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9763]
 gi|258424505|ref|ZP_05687382.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
 gi|258436865|ref|ZP_05689205.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9299]
 gi|258444416|ref|ZP_05692750.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A8115]
 gi|258448160|ref|ZP_05696289.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|258452469|ref|ZP_05700477.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5948]
 gi|258455994|ref|ZP_05703949.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|262049719|ref|ZP_06022585.1| hypothetical protein SAD30_1328 [Staphylococcus aureus D30]
 gi|262051982|ref|ZP_06024194.1| hypothetical protein SA930_0985 [Staphylococcus aureus 930918-3]
 gi|269202082|ref|YP_003281351.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282893602|ref|ZP_06301835.1| D-methionine transport system permease [Staphylococcus aureus
           A8117]
 gi|282915778|ref|ZP_06323548.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|282924513|ref|ZP_06332183.1| D-methionine transport system permease [Staphylococcus aureus
           A9765]
 gi|282927496|ref|ZP_06335114.1| D-methionine transport system permease [Staphylococcus aureus
           A10102]
 gi|283768178|ref|ZP_06341093.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|284023472|ref|ZP_06377870.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850484|ref|ZP_06791214.1| D-methionine transport system permease [Staphylococcus aureus
           A9754]
 gi|295405711|ref|ZP_06815521.1| D-methionine transport system permease [Staphylococcus aureus
           A8819]
 gi|296276252|ref|ZP_06858759.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245620|ref|ZP_06929488.1| D-methionine transport system permease [Staphylococcus aureus
           A8796]
 gi|304380477|ref|ZP_07363155.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|13700353|dbj|BAB41651.1| SA0421 [Staphylococcus aureus subsp. aureus N315]
 gi|14246231|dbj|BAB56625.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|57285530|gb|AAW37624.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127523|gb|ABD22037.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201775|gb|ABD29585.1| ABC transporter, permease protein, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|147739990|gb|ABQ48288.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH9]
 gi|149945419|gb|ABR51355.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JH1]
 gi|150373439|dbj|BAF66699.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156720926|dbj|BAF77343.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257839689|gb|EEV64158.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9763]
 gi|257845100|gb|EEV69137.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9635]
 gi|257848656|gb|EEV72643.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9299]
 gi|257850675|gb|EEV74623.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A8115]
 gi|257858675|gb|EEV81549.1| ABC transporter, permease [Staphylococcus aureus A6224]
 gi|257859869|gb|EEV82709.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5948]
 gi|257862206|gb|EEV84979.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A5937]
 gi|259160111|gb|EEW45143.1| hypothetical protein SA930_0985 [Staphylococcus aureus 930918-3]
 gi|259162181|gb|EEW46757.1| hypothetical protein SAD30_1328 [Staphylococcus aureus D30]
 gi|262074372|gb|ACY10345.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269940034|emb|CBI48410.1| putative transport system membrane protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282320407|gb|EFB50747.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|282590820|gb|EFB95896.1| D-methionine transport system permease [Staphylococcus aureus
           A10102]
 gi|282592822|gb|EFB97827.1| D-methionine transport system permease [Staphylococcus aureus
           A9765]
 gi|282764288|gb|EFC04415.1| D-methionine transport system permease [Staphylococcus aureus
           A8117]
 gi|283462057|gb|EFC09141.1| D-methionine transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|285816162|gb|ADC36649.1| Methionine ABC transporter permease protein [Staphylococcus aureus
           04-02981]
 gi|294822687|gb|EFG39126.1| D-methionine transport system permease [Staphylococcus aureus
           A9754]
 gi|294969786|gb|EFG45805.1| D-methionine transport system permease [Staphylococcus aureus
           A8819]
 gi|297177606|gb|EFH36857.1| D-methionine transport system permease [Staphylococcus aureus
           A8796]
 gi|298693792|gb|ADI97014.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus ED133]
 gi|302332176|gb|ADL22369.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302750354|gb|ADL64531.1| binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340995|gb|EFM06917.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312828957|emb|CBX33799.1| D-methionine transport system permease protein metI [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315130091|gb|EFT86080.1| hypothetical protein CGSSa03_04467 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|320139248|gb|EFW31127.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142062|gb|EFW33887.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439237|gb|EGA96963.1| ABC transporter ATP-binding protein [Staphylococcus aureus O11]
 gi|323442175|gb|EGA99807.1| ABC transporter ATP-binding protein [Staphylococcus aureus O46]
 gi|329313181|gb|AEB87594.1| Binding-protein-dependent transport systems inner membrane
           component [Staphylococcus aureus subsp. aureus T0131]
 gi|329725681|gb|EGG62160.1| D-methionine transport system permease protein MetI [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329730507|gb|EGG66896.1| D-methionine transport system permease protein MetI [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 219

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|317122893|ref|YP_004102896.1| phosphonate ABC transporter inner membrane subunit [Thermaerobacter
           marianensis DSM 12885]
 gi|315592873|gb|ADU52169.1| phosphonate ABC transporter, inner membrane subunit
           [Thermaerobacter marianensis DSM 12885]
          Length = 612

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/456 (10%), Positives = 125/456 (27%), Gaps = 52/456 (11%)

Query: 84  FVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
              + L+A++         V   ++++++SIP L +    V          V+   L + 
Sbjct: 112 VPLSFLSARNVAGRGWAYQVSRAVMNLIRSIPDLVWAALLVPAVGIGPTAGVLALTLFST 171

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +           + +S+  I R   E   +   S   +  Y   P  +P         
Sbjct: 172 GIVAKL--------VSESVEAIDRGPLEALDAVGASRLARIVYAVAPQVLPHF------- 216

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++   F    +        ++   GIG+ +   +       ++  ++ +  ++ + D + 
Sbjct: 217 IAYTLFMFEINLRTSTVLGLVGAGGIGATMMTQLTFFRYDRLMAIVIMLFVLVVVVDWIS 276

Query: 260 FR---PMIVWSNKFR-----LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
            R    ++  +         L+                   +       +      P   
Sbjct: 277 TRWRQRLVEGAPAVAAGDPILKAEEPGVVPSPGGAVAGAGGDAPPAAMSAGSGPAGPAEG 336

Query: 312 NVKKLCRTLG-----VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +                R     +  +     R +         V+  +           
Sbjct: 337 DAAARPEKAAGPAGVPERPPAGSSRSRWPEPPRRARWRWGLGLVVLAALYAWAFQGVSFS 396

Query: 367 IVNHFT----------YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +V              +     V      ++    +  +IAS+  +P G         ++
Sbjct: 397 LVGDPGPVFRGLFSPNWDYAGKVWEGVAESLQIAFLGTLIASVAAVPFGFLGARNVAAAA 456

Query: 417 KI--QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL--LMIFGTQWYILFNVIAGA 472
            +  +     +  FP  V   + ++ V        L +    +   G  +          
Sbjct: 457 SVVGKGLLDAIRTFPELVLAIIFMAAVGPSPFAGVLAVGFHSIGTVGKLY------AEAV 510

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            A   D  E   +   +    + + +LP + P +++
Sbjct: 511 EAVDRDPIEALQAVGASPLMTFWHGVLPQVLPEFLS 546


>gi|239908522|ref|YP_002955264.1| putative phosphate ABC transporter permease protein PstC
           [Desulfovibrio magneticus RS-1]
 gi|239798389|dbj|BAH77378.1| putative phosphate ABC transporter permease protein PstC
           [Desulfovibrio magneticus RS-1]
          Length = 297

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 20/207 (9%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-F 123
           L+   +S         + A       SRR   +  PI++++ ++P  ++GF    VV  F
Sbjct: 75  LAVTALSSAIAIPLGVMTAIYLAEIASRRTRDIFKPIVELLAALPSVVIGFFGMVVVAPF 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +        G  L     +          S+   ++  +PR+L+E S +   + ++    
Sbjct: 135 IQETFDLATGLNLFNAAIMLAFMSVPTICSVSEDAIYAVPRELKEASLALGATHFETISK 194

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL----------PGIGSYIALA 232
           + +P S+ G+   +M+ MS      +   M+  G  +IP             I + +A A
Sbjct: 195 VVLPASLSGISTAVMLGMSRAIGETMVVLMVAGGAAMIPNSIFSPVRPMPSSIAAEMAEA 254

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
               D    L+A+  +L +  L   L+
Sbjct: 255 SFRGDHYRALFAIGIVLFLFTLAFNLI 281



 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 25/262 (9%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L +   +  +  I  +  + G+ I        ++  H+ Y       +     +   + +
Sbjct: 18  LTALSSIVALALIMLYLFIEGLPIFKIVSVTDFLFGHYWYPTSEPHEFGIFPLIVASLAV 77

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV--------FFPLVVS 439
             ++S I IP+G+                  +P  +LLAA P+ V          P +  
Sbjct: 78  TALSSAIAIPLGVMTAIYLAEIASRRTRDIFKPIVELLAALPSVVIGFFGMVVVAPFIQE 137

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                        ++++ F +   I         A P + KE + +   T +     ++L
Sbjct: 138 TFDLATGLNLFNAAIMLAFMSVPTICSVSEDAIYAVPRELKEASLALGATHFETISKVVL 197

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT----------TGLGAYIAESTEK 549
           P       T  +     A   ++V  + + G   +            + + A +AE++ +
Sbjct: 198 PASLSGISTAVMLGMSRAIGETMVVLMVAGGAAMIPNSIFSPVRPMPSSIAAEMAEASFR 257

Query: 550 GSFPEVVLGV-LIMCCFVLALN 570
           G     +  + +++  F LA N
Sbjct: 258 GDHYRALFAIGIVLFLFTLAFN 279


>gi|312127783|ref|YP_003992657.1| phosphate ABC transporter inner membrane subunit PstC
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777802|gb|ADQ07288.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 284

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ +F F     +       +               +  +   +++  +  III   I I
Sbjct: 25  LITVFIFKEGFAIIKEYGLWNFILGKKWAPLSGKFGIFPMILGSIYVTLGAIIIGVPIGI 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  I+PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVNEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLIRKYLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +  +
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKIPNS 228



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 65/157 (41%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           T   ++  + I +        L   + ++  ++ P ++++  IP +  GF    VV  + 
Sbjct: 72  TLGAIIIGVPIGIATAIFLGELV--NEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G  + A   I    +     ++ + S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKYLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  G++ ++++ M       +A  M+      IP
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|227502867|ref|ZP_03932916.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium accolens ATCC 49725]
 gi|227076597|gb|EEI14560.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium accolens ATCC 49725]
          Length = 211

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + +A +I + + I++  RP  ++       +    P+     L +           
Sbjct: 23  VIQSVAVALVIALIIAIFVAQRPRGAAIANALTSIGLTLPSLALLGLAIPLFGIG----T 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +    L++F     IL N I G     +D  E A    ++       I LP  +P  +TG
Sbjct: 79  IPSVALVVFYAVLPILRNAIVGLHTVSDDVIESARGQGMSSTAILFRIRLPLAWPVIMTG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE------STEKGSFPEVV-LGVLIM 562
              +   +   + ++  A          GLG YI         T   +F  V  +GV+I+
Sbjct: 139 IRVSTQMSMGVAAIAAYALG-------PGLGGYIYSGLSQIGGTNALNFTLVGTIGVVII 191

Query: 563 CCFVLAL 569
              V A+
Sbjct: 192 ALIVDAI 198



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 19/210 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I      +   + +    ++ ++ ++L+   + A   A+  R   +   +  I  ++P L
Sbjct: 5   IAARWQDILFRSYQHASLVIQSVAVALVIALIIAIFVAQRPRGAAIANALTSIGLTLPSL 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F            + ++  +    V  +  +    L  +  D+ E +R   
Sbjct: 65  ALLGLAIPLFGIG--------TIPSVALVVFYAVLPILRNAIVGLHTVSDDVIESARGQG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S     + + +P + P ++  + +S       V A     +G      PG+G YI   +
Sbjct: 117 MSSTAILFRIRLPLAWPVIMTGIRVSTQMS-MGVAAIAAYALG------PGLGGYIYSGL 169

Query: 234 KEQDLLAI----LYAMLTMLGVIFLYDQLL 259
            +          L   + ++ +  + D +L
Sbjct: 170 SQIGGTNALNFTLVGTIGVVIIALIVDAIL 199


>gi|150021573|ref|YP_001306927.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
 gi|149794094|gb|ABR31542.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
          Length = 426

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 76/193 (39%), Gaps = 7/193 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFTVVY 122
             R+    +  +VISL    +     A+    G  L+ + +  ++  P +   +   ++ 
Sbjct: 224 LIRSIEVAILTVVISLSIGGMAGYAFARYSFRGKNLLKLSVLFVRMFPGISIAMPMVIIL 283

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +  K IG  L          VW +T S++     IP +LEE +  F  +    F+ 
Sbjct: 284 INMGFYDKPIGLSLVYSVGQIGMTVW-ITASIFMG---IPVELEEAAMIFGTTRRGAFFK 339

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P ++PGL  + M +  G W     + ++   +   P+  +   +  A    +L A  
Sbjct: 340 VTLPLALPGLAASAMYAFIGSWAETAQAIVLTQFNPTFPVV-VYQTLVGAKGLINLTAAG 398

Query: 243 YAMLTMLGVIFLY 255
              L +  V+F  
Sbjct: 399 GVALALPAVVFTM 411



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           ++ ++I+  I    G            +       +  FP      P+V+  ++    + 
Sbjct: 232 ILTVVISLSIGGMAGYAFARYSFRGKNLLKLSVLFVRMFPGISIAMPMVIILINMGFYDK 291

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + LSL+   G     ++   +     P + +E A  F  T    +  + LP   P    
Sbjct: 292 PIGLSLVYSVGQIGMTVWITASIFMGIPVELEEAAMIFGTTRRGAFFKVTLPLALPGLAA 351

Query: 509 GAITACGGAWN----ASIVSEV-----ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
            A+ A  G+W     A ++++             +   GL    A      + P VV  +
Sbjct: 352 SAMYAFIGSWAETAQAIVLTQFNPTFPVVVYQTLVGAKGLINLTAAGGVALALPAVVFTM 411

Query: 560 LI 561
           +I
Sbjct: 412 II 413


>gi|118470411|ref|YP_890009.1| phosphate ABC transporter permease PstA [Mycobacterium smegmatis
           str. MC2 155]
 gi|33356534|gb|AAO43113.1| PstA [Mycobacterium smegmatis]
 gi|118171698|gb|ABK72594.1| phosphate ABC transporter, permease protein PstA [Mycobacterium
           smegmatis str. MC2 155]
          Length = 308

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 73/186 (39%), Gaps = 8/186 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASR-TTLRMLSAMVI 78
           +    L+  + +++  GI   T P                    +A   T L+ L   +I
Sbjct: 42  IALIPLLWVLYSVITKGIHAVTSPTWFTNSQAGMTAFSPGGGVYHAIVGTVLQGLVCSLI 101

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+    + A      A   RLG +   ++DI+  +P +    F    ++     +  G  
Sbjct: 102 SIPIGVMVAVYLVEYAGGSRLGKITTFMVDILTGVPSIVAALFIYALWVATLGFQRSGFA 161

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           ++    +    V  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V  
Sbjct: 162 VSLSLVLLMIPV--IVRATEEMLRIVPMDLREASYALGVPKWKTIVRIVIPTALSGIVTG 219

Query: 196 MMMSMS 201
           +M+S++
Sbjct: 220 VMLSLA 225



 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 395 IIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYYH 445
           ++ S+I IP+G+ +            +         +L   P+     F   +   +   
Sbjct: 96  LVCSLISIPIGVMVAVYLVEYAGGSRLGKITTFMVDILTGVPSIVAALFIYALWVATLGF 155

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +SL ++      I+          P D +E + +  +  W+    I++P     
Sbjct: 156 QRSGFAVSLSLVLLMIPVIVRATEEMLRIVPMDLREASYALGVPKWKTIVRIVIPTALSG 215

Query: 506 YVTGAITAC 514
            VTG + + 
Sbjct: 216 IVTGVMLSL 224


>gi|28872301|ref|NP_794920.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213969385|ref|ZP_03397522.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301386645|ref|ZP_07235063.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061122|ref|ZP_07252663.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132942|ref|ZP_07258932.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855555|gb|AAO58615.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925756|gb|EEB59314.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|330962047|gb|EGH62307.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|331016095|gb|EGH96151.1| D-methionine ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 214

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|270260950|ref|ZP_06189223.1| transporter [Serratia odorifera 4Rx13]
 gi|270044434|gb|EFA17525.1| transporter [Serratia odorifera 4Rx13]
          Length = 258

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 78/212 (36%), Gaps = 14/212 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L +  + +I++            +RR G     +++ + ++      TF  V  + +  
Sbjct: 60  LLLVAVSSLIAVAIGVAAGI--GVTRRAGKEFRSLVETLVAVGQ----TFPPVAVLAVAV 113

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +  +E  AI A+    +  +       + ++P    E+++   ++  Q  W + +P +
Sbjct: 114 PVMGFSEQPAIIALVLYGLLPILQGTLAGIESVPSATREIAQGVGMNARQILWRVELPLA 173

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            P +V  +  S+        A+    VG        +GS I + +   +   ++     +
Sbjct: 174 APVIVAGIRTSVII--NIGTAAIASTVGTKT-----LGSPIIIGLSGFNTAYVIQGAAVV 226

Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280
             +  + D +LF   + +   +R +       
Sbjct: 227 ALLAIITD-MLFERWVRYLTAWRQQTPADPSA 257



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 80/244 (32%), Gaps = 9/244 (3%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           +    + R       + F ++  +  G+      +          +Y        ++  +
Sbjct: 1   MSAQRSTRWLRDPLPWTFALLLALVFGMNHLHGLFAAWFPDLDRPVYQQDSFISLVWAHL 60

Query: 392 VLIIIASIIWIPVGIW--IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           +L+ ++S+I + +G+   IG       + +   + L A         V++          
Sbjct: 61  LLVAVSSLIAVAIGVAAGIGVTRRAGKEFRSLVETLVAVGQTFPPVAVLAVAVPVMGFSE 120

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               + ++      IL   +AG  + P+  +E+A    +   +    + LP   P  V G
Sbjct: 121 QPAIIALVLYGLLPILQGTLAGIESVPSATREIAQGVGMNARQILWRVELPLAAPVIVAG 180

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             T+       + ++         + T  LG+ I       +   V+ G  ++    +  
Sbjct: 181 IRTSVIINIGTAAIA-------STVGTKTLGSPIIIGLSGFNTAYVIQGAAVVALLAIIT 233

Query: 570 NRFL 573
           +   
Sbjct: 234 DMLF 237


>gi|227486971|ref|ZP_03917287.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541868|ref|ZP_03971917.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227093045|gb|EEI28357.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182311|gb|EEI63283.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 273

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 76/207 (36%), Gaps = 4/207 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTF 118
           +  +    + L  L+   +++L   +     A+ + R   ++  I+      P +  +T 
Sbjct: 61  NFLRAIGNSLLISLATTALAVLVGVLAGYALARLNFRGKGIVTAIILAASMFPGIALVTP 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               F N+     IG   A I    +  +    +++      +P +LEE +R    S + 
Sbjct: 121 LFQLFSNIG---WIGTYQALIVPNISFALPLTVYTLISFFKQLPWELEEAARVDGASRFT 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P L    +++    W   + ++ +    T      I  +   +  E   
Sbjct: 178 AFRKVLLPLAAPALFTTAILAFIATWNEFMLAKQLSTTATEPVTVAIARFSGPSAFEYPY 237

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
            A++ A   +   + +   +  R ++ 
Sbjct: 238 AAVMAAGTLVTVPLVVMVLVFQRRIVA 264



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 66/203 (32%), Gaps = 2/203 (0%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF-PL 436
            +     ++   +    +A ++ +  G  +          +       + FP      PL
Sbjct: 62  FLRAIGNSLLISLATTALAVLVGVLAGYALARLNFRGKGIVTAIILAASMFPGIALVTPL 121

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                +   +     L +  I       ++ +I+     P + +E A     + +  +R 
Sbjct: 122 FQLFSNIGWIGTYQALIVPNISFALPLTVYTLISFFKQLPWELEEAARVDGASRFTAFRK 181

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++LP   P   T AI A    WN  ++++  S       T  +  +   S  +  +  V+
Sbjct: 182 VLLPLAAPALFTTAILAFIATWNEFMLAKQLSTTATEPVTVAIARFSGPSAFEYPYAAVM 241

Query: 557 LGVLIMCCFVLALNRFLWHPLYL 579
               ++   ++ +       +  
Sbjct: 242 AAGTLVTVPLVVMVLVFQRRIVA 264


>gi|87200292|ref|YP_497549.1| phosphate ABC transporter permease [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87135973|gb|ABD26715.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 428

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 59/139 (42%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  M ++L+  F    LAA        K+R    + + I + + ++P + F    +  F+
Sbjct: 214 MLTMFVTLVLAFPVGVLAALYLEEYAPKNRWTEWIEISI-NNLAAVPSIIFGLLGLAVFL 272

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P       +  +  +    +  +  S   ++  +P  + + + +   S  Q  ++  
Sbjct: 273 ALFPHYRSAPLIGGM-TLALMTMPVIVISGRNAIKAVPPSIRDAALAIGASKVQVVFHHV 331

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++ M+  
Sbjct: 332 LPLALPGILTGTIIGMARA 350



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 12/149 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
           ++ + +  ++  PVG+               +  I+     LAA P+ +F      + ++
Sbjct: 214 MLTMFVTLVLAFPVGVLAALYLEEYAPKNRWTEWIEISINNLAAVPSIIFGLLGLAVFLA 273

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              +Y   P +    L +  T   I+ +      A P   ++ A +   +  +   + +L
Sbjct: 274 LFPHYRSAPLIGGMTLALM-TMPVIVISGRNAIKAVPPSIRDAALAIGASKVQVVFHHVL 332

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVAS 528
           P   P  +TG I     A   +    +  
Sbjct: 333 PLALPGILTGTIIGMARALGETAPLLMIG 361


>gi|330874001|gb|EGH08150.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966429|gb|EGH66689.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 214

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +SIP 
Sbjct: 6   LLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRVLGGFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P + PG+V    +++
Sbjct: 124 GCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|253566994|ref|ZP_04844445.1| putrescine transport system permease PotH [Bacteroides sp. 3_2_5]
 gi|251944118|gb|EES84627.1| putrescine transport system permease PotH [Bacteroides sp. 3_2_5]
          Length = 232

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 8/187 (4%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKV 131
           +   ++ +L  +  A + + ++      + +L I+   + IL     TV  F       V
Sbjct: 38  IITTIVCILLGYPAAWILSNAKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SV 94

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              E A IF +  + +  M + +Y +L  +     E ++    +  Q F+   +P SMPG
Sbjct: 95  PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG 154

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  +MM           +E++ + +  +     G+ I   I            L ML +
Sbjct: 155 VMSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLL 210

Query: 252 IFLYDQL 258
           I      
Sbjct: 211 IAATSLF 217



 Score = 38.8 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 10/193 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSC 440
           T    + + II +I+ I +G    WI     ++         +     N+    +  V+ 
Sbjct: 29  TFVYSIGIAIITTIVCILLGYPAAWILSNAKLNRSKTMVVLFILPMWVNILVRTLATVAL 88

Query: 441 VSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             ++ +       +  +       +++ +        + + E A        + +   +L
Sbjct: 89  FDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVL 148

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  ++G +       +   ++E+ +  +I L     G  I E+     +       
Sbjct: 149 PLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALS 204

Query: 560 LIMCCFVLALNRF 572
           LIM   + A + F
Sbjct: 205 LIMLLLIAATSLF 217


>gi|297564299|ref|YP_003683272.1| phosphate ABC transporter, inner membrane subunit PstA
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848748|gb|ADH70766.1| phosphate ABC transporter, inner membrane subunit PstA
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 303

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 3/184 (1%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    LV+ I  +   GI    +        P   +          T   M  A+V+S+ 
Sbjct: 43  LAMIPLVLIIFEVTRRGIGVVNLEFFTETEPPPRREGGGYAAGFFGTLYIMALAVVMSIP 102

Query: 82  FTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           F    A    +    RL   +    D+M  IP + F+   V   + +  G++     A  
Sbjct: 103 FGIATAVYVVEYGPNRLTGAIRFFTDVMTGIPSI-FVGLFVYGLVVIGWGQMGFGTFAGA 161

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            AI    +  +T S  + L  +P ++   S       WQ   +  +P + PGL    M++
Sbjct: 162 LAIAMMMLPIVTRSAEEMLRLVPNEMRNASYGLGARKWQTIVHTVLPAAAPGLTTGSMLA 221

Query: 200 MSGG 203
           ++ G
Sbjct: 222 VARG 225



 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 74/231 (32%), Gaps = 5/231 (2%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
            + +     G  RF      + L +   ++ +  +     V    IG+            
Sbjct: 15  PLSQRPPGSGFRRFKDRSASVALTAAMVLAMIPLVLIIFEVTRRGIGVVNLEFFTETEPP 74

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFP 429
             ++          T++ + + ++++    I   +++       ++  I+ F  ++   P
Sbjct: 75  PRREGGGYAAGFFGTLYIMALAVVMSIPFGIATAVYVVEYGPNRLTGAIRFFTDVMTGIP 134

Query: 430 ANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSF 486
           +     F   +  + +  +    +   L I      I+           PN+ +  +   
Sbjct: 135 SIFVGLFVYGLVVIGWGQMGFGTFAGALAIAMMMLPIVTRSAEEMLRLVPNEMRNASYGL 194

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
               W+   + +LP   P   TG++ A       +    + ++G   + T 
Sbjct: 195 GARKWQTIVHTVLPAAAPGLTTGSMLAVARGIGETAPLLLTAFGTGLVVTA 245


>gi|227530018|ref|ZP_03960067.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350050|gb|EEJ40341.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 211

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           ++  ++     +  + +L+++ I+L+       L    +     L     ++ S+P   F
Sbjct: 7   INWSTMLIDLQQHAVMVLASLGIALVIAGAMILLLMHRKNWLNGLTYFFSLLYSVPSFAF 66

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                  F  L P   +G   A I      +   +  +    +  I   L EV++   ++
Sbjct: 67  -------FALLLPISGLGMRTAIIVLTIYCEYV-LLRTFITGIQEIDPALIEVAKGMGMT 118

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
             Q F+ + +P + P +   + ++++        +  I  G       G+G  +   ++ 
Sbjct: 119 RKQVFFKVQLPLATPAIFSGLQVALASTMGIATIAATINAG-------GLGQLLFEGLQS 171

Query: 236 QDLLAILYA 244
           Q ++ IL+ 
Sbjct: 172 QQVVPILWG 180



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + IA +I   + + +  R +  + +  F  LL + P+  FF      +    L   
Sbjct: 23  VLASLGIALVIAGAMILLLMHRKNWLNGLTYFFSLLYSVPSFAFF---ALLLPISGLGMR 79

Query: 450 LWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
             + +L I+    Y+L    I G         EVA    +T  + +  + LP   P   +
Sbjct: 80  TAIIVLTIYCE--YVLLRTFITGIQEIDPALIEVAKGMGMTRKQVFFKVQLPLATPAIFS 137

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           G   A       + ++   + G       GLG  + E  +      ++ G
Sbjct: 138 GLQVALASTMGIATIAATINAG-------GLGQLLFEGLQSQQVVPILWG 180


>gi|51891885|ref|YP_074576.1| phosphate ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855574|dbj|BAD39732.1| phosphate ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 283

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 19/280 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIW 381
            R    +             +L I    ++  +  G+      ++      Y+    V  
Sbjct: 2   TRQQIADRVATAVLWAAGILILLILAGFLLPILIEGLPVVDWQFLTTRSSAYRAGGGVGA 61

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVV 438
               T++   + ++ +  + +  GI++                 + LA+ P+ V     +
Sbjct: 62  QLFNTIYITGLSLLFSLPVGVGAGIYMAEYAKPGRMTDLIRLSVEALASVPSIVLGLFGM 121

Query: 439 SCVSYY-HLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRY 496
                Y      +    L +      +L  N      A P  ++E +     T W+    
Sbjct: 122 ILFVNYMGWGFTILGGSLSLALLNLPVLVRNTEEAVRAVPQSYREGSLGLGATQWQTISR 181

Query: 497 IILPGIFPYYVTGAITACGGAWN---------ASIVSEVASWGHIHLRTTGLGAYIAEST 547
           ++LP   P  +TG     G A               S       + +    L   I   T
Sbjct: 182 VVLPSALPGILTGLTLVAGRALGETAVLIYTAGVTASRHFPNPDLMIAGETLAVRIWSVT 241

Query: 548 EKGSFPE----VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
            +G  P+     +    ++   VL +N  +  PLY Y  R
Sbjct: 242 SEGLVPDADRIAMGASALLILLVLFVNFLIALPLYRYRRR 281



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 72/193 (37%), Gaps = 10/193 (5%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           I+ R+   +      ++++ +   LL  + E     D   +   +    +          
Sbjct: 6   IADRVATAVLWAAGILILLILAGFLLPILIEGLPVVDWQFLTTRSSAYRA-GGGVGAQLF 64

Query: 71  RMLSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
             +    +SLLF+      A       AK  R+  ++   ++ + S+P +    F ++ F
Sbjct: 65  NTIYITGLSLLFSLPVGVGAGIYMAEYAKPGRMTDLIRLSVEALASVPSIVLGLFGMILF 124

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +N           +   A+    V  +  +  +++  +P+   E S     + WQ    +
Sbjct: 125 VNYMGWGFTILGGSLSLALLNLPV--LVRNTEEAVRAVPQSYREGSLGLGATQWQTISRV 182

Query: 184 GVPFSMPGLVWNM 196
            +P ++PG++  +
Sbjct: 183 VLPSALPGILTGL 195


>gi|294816400|ref|ZP_06775043.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|326444728|ref|ZP_08219462.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|294328999|gb|EFG10642.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
          Length = 223

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 6/141 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + Q            + +S L     A +     R G + V +  I +++P    L  
Sbjct: 21  GGIAQRLVEHLWLTSVCLGLSCLIALPVALVLGHVGRGGALAVNLSHIGRAVPTFAVLVL 80

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++  +  Y           + A+    V  +  + Y  +  + RD+   +R   ++G Q
Sbjct: 81  LLLSPIGAYGS------WPTVIALVLFAVPPLLVNAYTGMRGVDRDVVRAARGMGMTGRQ 134

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
               + +P ++P ++  + ++
Sbjct: 135 MLLGVELPLALPLILTGVRIA 155



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 2/153 (1%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++  ++ +   +     +       ++   V + ++ +I +PV + +G      +     
Sbjct: 6   EAWRWLTDPAHWSGDGGIAQRLVEHLWLTSVCLGLSCLIALPVALVLGHVGRGGALAVNL 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      LV+  +S      +    + ++      +L N   G      D   
Sbjct: 66  SHIGRAVPTFAV--LVLLLLSPIGAYGSWPTVIALVLFAVPPLLVNAYTGMRGVDRDVVR 123

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            A    +TG +    + LP   P  +TG   A 
Sbjct: 124 AARGMGMTGRQMLLGVELPLALPLILTGVRIAA 156


>gi|307153364|ref|YP_003888748.1| phosphate ABC transporter inner membrane subunit PstC [Cyanothece
           sp. PCC 7822]
 gi|306983592|gb|ADN15473.1| phosphate ABC transporter, inner membrane subunit PstC [Cyanothece
           sp. PCC 7822]
          Length = 320

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 77/220 (35%), Gaps = 25/220 (11%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           ++++ I  I+L           +  +   + +  +    A       + + +ISL+    
Sbjct: 41  LILLSISLIVLIRSWPAIQQYGLGFLFSSSWNPVTNDYGALPVIYGTIVSSLISLIIAIP 100

Query: 86  YATLAAK-------SRRLGMVLVPILDIMQSIP--------ILGFLTFT----------V 120
                A        S ++  VLV +++++ +IP        I   +             +
Sbjct: 101 LGVGTALFLSEDFISLKIRTVLVFLVELLAAIPSVVYGLWGIFVLIPLVTPIGSWLHNHL 160

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +             L A   +    +  +T     SL ++P +L + S     + W+  
Sbjct: 161 GWIPLFSTPPAGPGMLPAGMVLAIMILPIITAISRDSLASLPPELRQASLGLGATRWETI 220

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           + + +P +  G+V  +M+++       +A  MI+     +
Sbjct: 221 FRVLIPAAFSGIVGGVMLALGRAMGETMAVTMIIGNSNQL 260



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 29/238 (12%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              + F+ L     +   L +    ++  +    A Q  G      +  + +   +    
Sbjct: 23  SLDQGFIWLTLAFAIGIGLILLSISLIVLIRSWPAIQQYGLGFLFSSSWNPVTNDYGALP 82

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF----- 433
            ++  +V  +I+ II IP+G+              I + +    +LLAA P+ V+     
Sbjct: 83  VIYGTIVSSLISLIIAIPLGVGTALFLSEDFISLKIRTVLVFLVELLAAIPSVVYGLWGI 142

Query: 434 ---FPLV-------------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFP 476
               PLV             +   S     P +  + +++      I+  +     ++ P
Sbjct: 143 FVLIPLVTPIGSWLHNHLGWIPLFSTPPAGPGMLPAGMVLAIMILPIITAISRDSLASLP 202

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            + ++ +     T W     +++P  F   V G + A G A   ++   +       L
Sbjct: 203 PELRQASLGLGATRWETIFRVLIPAAFSGIVGGVMLALGRAMGETMAVTMIIGNSNQL 260


>gi|17988270|ref|NP_540904.1| phosphate ABC transporter permease [Brucella melitensis bv. 1 str.
           16M]
 gi|17984039|gb|AAL53168.1| phosphate transport system permease protein psta [Brucella
           melitensis bv. 1 str. 16M]
          Length = 436

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|322371272|ref|ZP_08045824.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320549262|gb|EFW90924.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 329

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 71/201 (35%), Gaps = 14/201 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--NLYPGK 130
           L A V SL+F    A L A+      ++  ++D+   +P        +  F    L+PG 
Sbjct: 120 LLATVASLVFGVPLAYLLARGFSGQAIVESLVDLPLVVPHSVAGILILFGFGRRGLFPGV 179

Query: 131 VIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            +   +  +    T        +   ++   I   LE  +RS   + ++ F  + +P + 
Sbjct: 180 SVLTTITGMVLALTFVSAPFAVNTTREAFETIDSRLEYAARSHGATPFETFRRIQIPLAY 239

Query: 190 PGLVWNMMMSM--SGGWFFVVASEMIVVG---------DTVIPLPGIGSYIALAIKEQDL 238
            G++   +++       F  VA     V                P        +    D 
Sbjct: 240 RGILTGGVLAWARGVSEFGAVAVVAYSVNFFYPFTGEETVAQHAPVYIFNTFTSAGLADA 299

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
            A+ + +L M   IFL  +LL
Sbjct: 300 SAVAFILLVMSAGIFLIVRLL 320



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 82/257 (31%), Gaps = 21/257 (8%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
                 +    +    +   + + I  Q+   IV      +V  +++L   T++  ++  
Sbjct: 67  WFGVAAATFGVVLLLALGMPLVMFITRQNPSLIVEAARSSEVHTMLYL---TIYGPLLAT 123

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL---- 450
           + + +  +P+   +       + ++    L    P +V   L++       L P +    
Sbjct: 124 VASLVFGVPLAYLLARGFSGQAIVESLVDLPLVVPHSVAGILILFGFGRRGLFPGVSVLT 183

Query: 451 ---WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               + L + F +  + +           +  +  A S   T +  +R I +P  +   +
Sbjct: 184 TITGMVLALTFVSAPFAVNTTREAFETIDSRLEYAARSHGATPFETFRRIQIPLAYRGIL 243

Query: 508 TGAITACGGAWNASIVSEVASW---------GHIHLRTTGLGAYIAESTEKG--SFPEVV 556
           TG + A     +      V ++         G   +            T  G      V 
Sbjct: 244 TGGVLAWARGVSEFGAVAVVAYSVNFFYPFTGEETVAQHAPVYIFNTFTSAGLADASAVA 303

Query: 557 LGVLIMCCFVLALNRFL 573
             +L+M   +  + R L
Sbjct: 304 FILLVMSAGIFLIVRLL 320


>gi|319892601|ref|YP_004149476.1| Phosphate transport system permease protein PstA [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162297|gb|ADV05840.1| Phosphate transport system permease protein PstA [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464359|gb|ADX76512.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           pseudintermedius ED99]
          Length = 293

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   M++ + I+L+     A      AK       +   +  + S+P + +       F+
Sbjct: 79  TLWLMMTLIPIALVLGVGSAIYLEEYAKDNAFTKFIRVNISNLASVPSIVYGLLGATIFV 138

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L          A   A+    V  +  +  +++ ++P+ ++E S     + WQ    + 
Sbjct: 139 ALLQLGNSVIAAALTLALLILPV--IIVASQEAIRSVPQSVKEASYGLGANKWQTIQQVV 196

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++  +++++S  
Sbjct: 197 LPAAIPGIITGVILAISRA 215



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 6/201 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
            L +    ++  +  G+   S  +  N  +       +    I T++ ++ LI IA ++ 
Sbjct: 35  GLIVLAILIIDILRKGLPVMSTDFFTNFSSSSASSAGVKGALIGTLWLMMTLIPIALVLG 94

Query: 402 IPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMI 457
           +   I++      ++  +        LA+ P+ V+  L     V+   L  ++  + L +
Sbjct: 95  VGSAIYLEEYAKDNAFTKFIRVNISNLASVPSIVYGLLGATIFVALLQLGNSVIAAALTL 154

Query: 458 FGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                 ++         + P   KE +       W+  + ++LP   P  +TG I A   
Sbjct: 155 ALLILPVIIVASQEAIRSVPQSVKEASYGLGANKWQTIQQVVLPAAIPGIITGVILAISR 214

Query: 517 AWNASIVSEVASWGHIHLRTT 537
           A   +          I LRT 
Sbjct: 215 AIGETAPLVAIGIPTILLRTP 235


>gi|317054143|ref|YP_004118168.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952138|gb|ADU71612.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 743

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 77/477 (16%), Positives = 151/477 (31%), Gaps = 57/477 (11%)

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGWQ 178
           +     + PG+ +   L  I+         + F +   +   +   LEE S++ R   W+
Sbjct: 291 LAALFGIEPGRWL-YGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRADRWR 349

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P   PGL    ++S          + M++ G   +    I   +  A  +   
Sbjct: 350 TFTRISLPLMAPGLANAFLISFIES-MADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPSR 408

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298
                A+L M+ + F     + + + +    F      G       +         LR+ 
Sbjct: 409 ----AAVLAMILLCFTLAAFILQRLWLGGKNFATVTGKGDGGNHGQL------PRALRYG 458

Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
            Y     +   +  +  +    G ++     + L L    R   +       +  GVA  
Sbjct: 459 VYGMVLPWGLFTLVIYGMILVGGFVQSWGLNDTLTLEHYIRAFRITFTDGHLLWSGVAWN 518

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
             W                        T+   ++   + +I+ +     I  +     + 
Sbjct: 519 SFW-----------------------TTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQT 555

Query: 419 QPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS---- 473
             F  +L+ A P  V   + VS V  Y+L P       MI    + +  N+  G      
Sbjct: 556 FEFLLMLSFAIPGTV---IGVSYVMAYNLPPLEITGTAMILIACF-VFRNMPVGVRGGIA 611

Query: 474 ---AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                     E + +     +R  R ++LP + P      + A   A  +          
Sbjct: 612 AMSQLDKSLDEASLTLGANSFRTLRKVVLPLLKPAISAALVYAFVRAITSISAVIFLVSA 671

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             ++ T+    YI    E G +   +    +++   +L +  F W    L G R LR
Sbjct: 672 QYNMATS----YIVGLVENGEYGVAIAYSTVLIVVMLLIIGVFQW----LVGERRLR 720


>gi|299138691|ref|ZP_07031869.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
 gi|298599327|gb|EFI55487.1| binding-protein-dependent transport systems inner membrane
           component [Acidobacterium sp. MP5ACTX8]
          Length = 209

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 9/137 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                    SAM+ + L       L  + +RL   ++ + +I+Q+IP L         F 
Sbjct: 16  TFEHLWLTASAMLFASLIGLPLGILLTRQQRLARPVLAVANILQTIPSLAL-------FG 68

Query: 125 NLYPGKVIGAELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            L P   +G   A  AI A+    +  +  + Y  + ++   L +VS +  + G Q+   
Sbjct: 69  LLLPVPFLGDRAARLAIVALIGYALLPILRNTYAGIRSVDPALIDVSNALGMKGLQRLVK 128

Query: 183 LGVPFSMPGLVWNMMMS 199
           + +P +   ++  +  +
Sbjct: 129 VELPLAASVILAGLRTA 145



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 60/146 (41%), Gaps = 1/146 (0%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           ++ F ++    +  L    ++     ++ AS+I +P+GI +  +  ++  +   A +L  
Sbjct: 1   MSEFLHRYGSQIARLTFEHLWLTASAMLFASLIGLPLGILLTRQQRLARPVLAVANILQT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+   F L++           L +  L+ +     IL N  AG  +      +V+++  
Sbjct: 61  IPSLALFGLLLPVPFLGDRAARLAIVALIGY-ALLPILRNTYAGIRSVDPALIDVSNALG 119

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITA 513
           + G +    + LP      + G  TA
Sbjct: 120 MKGLQRLVKVELPLAASVILAGLRTA 145


>gi|298694684|gb|ADI97906.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 308

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +        +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|305680596|ref|ZP_07403404.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
 gi|305660127|gb|EFM49626.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 213

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +   + +    ++  ++++ +   V A L+ +  RL  +   +  +  +IP    + 
Sbjct: 9   WTHILADSWQHLSLVVQCLILATIIAVVCAALSYQHPRLAALANNVSTVGLTIPSFALVG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++ F         G   A I   F + +  +  +    L  +  ++   +R   +S +
Sbjct: 69  ILIIPFG-------FGVLPAVIVVTFFATL-PILRNAVVGLSEVDSNIVSAARGIGMSRF 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             F+ + +P + P ++  M +S +     + A     +G      PG+G YI   +    
Sbjct: 121 DTFFRVELPLAWPVILAGMRVS-AQMTMGIAAVAAYALG------PGLGGYIFSGLSRLG 173

Query: 238 LLAILYAMLTMLGVIF 253
                 ++ T +  + 
Sbjct: 174 GANSFESVATGVIAVV 189



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 11/176 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F  +   +++      +  VV  +I+A+II +         P +++     + +   
Sbjct: 1   MREFITERWTHILADSWQHLSLVVQCLILATIIAVVCAALSYQHPRLAALANNVSTVGLT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     +++    +  L   + ++          IL N + G S   ++    A    
Sbjct: 61  IPSFALVGILIIPFGFGVLPAVIVVTFFATL----PILRNAVVGLSEVDSNIVSAARGIG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           ++ +  +  + LP  +P  + G   +       + V+  A          GLG YI
Sbjct: 117 MSRFDTFFRVELPLAWPVILAGMRVSAQMTMGIAAVAAYALG-------PGLGGYI 165


>gi|320333647|ref|YP_004170358.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319754936|gb|ADV66693.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 377

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 69/181 (38%), Gaps = 15/181 (8%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFMNLYP 128
           +L+A+ ++LL     A  A  S   G  ++ +   +Q++P L  L      + +     P
Sbjct: 174 VLTALGVALLLGGPLAVWAGTSSARGGAVLGVAGALQTVPSLALLGLLIAPLAWLAAHVP 233

Query: 129 -----GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                G        A+ A+    +  +  +   +L  +     + +R   ++  Q FW +
Sbjct: 234 ALRAAGVSGIGVAPALVALTLYALLPVLRNGVVALRGVDVGALDAARGMGMTPAQVFWRV 293

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P ++P  +  +  +        VAS   ++G       G+G YI   ++      IL 
Sbjct: 294 QLPLALPVWLAGVRQA--TVLLVGVASVAALIG-----AGGLGVYIFRGLQGGAADLILL 346

Query: 244 A 244
            
Sbjct: 347 G 347



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 21/228 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   W   V  + +G    +   +V   T  +           +  V+  + +A ++  
Sbjct: 129 WLVWVWALPVLALLLGGHLGAWSVLVEGRTEGERWTAEVAQHARL--VLTALGVALLLGG 186

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW----------- 451
           P+ +W G        +   A  L   P+     L+++ +++   +               
Sbjct: 187 PLAVWAGTSSARGGAVLGVAGALQTVPSLALLGLLIAPLAWLAAHVPALRAAGVSGIGVA 246

Query: 452 -LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              + +       +L N +           + A    +T  + +  + LP   P ++ G 
Sbjct: 247 PALVALTLYALLPVLRNGVVALRGVDVGALDAARGMGMTPAQVFWRVQLPLALPVWLAGV 306

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             A       + V+ +   G       GLG YI    + G+   ++LG
Sbjct: 307 RQATVLLVGVASVAALIGAG-------GLGVYIFRGLQGGAADLILLG 347


>gi|307297589|ref|ZP_07577395.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916849|gb|EFN47231.1| binding-protein-dependent transport systems inner membrane
           component [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 213

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILG 114
           +   + +         L++  ++++     A    +   R+ G +++ I    Q++P + 
Sbjct: 10  NSGYIMERLLEHIFIFLTSWSMAVVAGVAIAIFVTRPGHRKAGKLVLSITGATQAVPSIA 69

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            +    ++               A+ A+F   +  + F+    L N+   ++E ++   +
Sbjct: 70  VIALVFLFMGIG--------AAPAVVALFLYSLVPVVFNTASGLMNVSMMMKEAAKGMGM 121

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q  W + +P ++P ++  +  S          +         I   G+G  I   ++
Sbjct: 122 TNRQILWKVEMPVTVPTMLSGIRSS-------ATINIGTAAIAASIGAGGLGEIIFTGLR 174

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
                 I+   + +  +    D +L
Sbjct: 175 MTRGPMIIAGAIPVTILAIAVDIIL 199



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 13/208 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLL 425
           V  + +++  Y++      +F  +    +A +  + + I++           +       
Sbjct: 3   VLEYMFENSGYIMERLLEHIFIFLTSWSMAVVAGVAIAIFVTRPGHRKAGKLVLSITGAT 62

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A P+     LV   +            + +   +   ++FN  +G        KE A  
Sbjct: 63  QAVPSIAVIALVFLFMGIGAA----PAVVALFLYSLVPVVFNTASGLMNVSMMMKEAAKG 118

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T  +    + +P   P  ++G  ++       + ++     G        LG  I  
Sbjct: 119 MGMTNRQILWKVEMPVTVPTMLSGIRSSATINIGTAAIAASIGAGG-------LGEIIFT 171

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  P ++ G + +    +A++  L
Sbjct: 172 GLRMTRGPMIIAGAIPVTILAIAVDIIL 199


>gi|302382811|ref|YP_003818634.1| phosphate ABC transporter inner membrane subunit PstA
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302193439|gb|ADL01011.1| phosphate ABC transporter, inner membrane subunit PstA
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 431

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 74/213 (34%), Gaps = 22/213 (10%)

Query: 74  SAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
             ++++          AA       K  R+  ++   ++ + ++P + +    V  F+N 
Sbjct: 218 LMLLVTAALAIPLGVGAAVYLEEFSKKGRITDLIEVNINNLAAVPSIVYGLLGVALFINW 277

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  + L     +    +  +  +   +L  +P  + E + +   S  Q  ++  +P
Sbjct: 278 -AHLPRSSPLVGGLVLALMALPTIIIATRSALKAVPPSIREAALAMGASRTQTVFHHVLP 336

Query: 187 FSMPGLVWNMMMSMSGGW-----FFVVASEMIVVGDTVIPLPGIGS-----YIALAIKEQ 236
            +MPG++   ++SM+          ++     V G         G+     YI     E+
Sbjct: 337 LAMPGVLTGTIISMAHALGETAPLLLIGMVSFVPGIPHSVTAPTGALPSLVYIWENASER 396

Query: 237 ----DLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                  A +  +L  + V+     LL R    
Sbjct: 397 AFHERTAAAILVLLAFMIVMNAAAILLRRRFER 429



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 75/201 (37%), Gaps = 21/201 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +++++ + + IP+G+              I+  I+     LAA P+ V+  L V+    
Sbjct: 217 ALMLLVTAALAIPLGVGAAVYLEEFSKKGRITDLIEVNINNLAAVPSIVYGLLGVALFIN 276

Query: 444 YHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P    L   L++       I+    +   A P   +E A +   +  +   + +LP
Sbjct: 277 WAHLPRSSPLVGGLVLALMALPTIIIATRSALKAVPPSIREAALAMGASRTQTVFHHVLP 336

Query: 501 GIFPYYVTGAITACGGAWN-----ASIVSEVASWGHIHLRTTGLGA-----YIA-ESTEK 549
              P  +TG I +   A         I       G  H  T   GA     YI   ++E+
Sbjct: 337 LAMPGVLTGTIISMAHALGETAPLLLIGMVSFVPGIPHSVTAPTGALPSLVYIWENASER 396

Query: 550 GSFPEVVLGVLIMCCFVLALN 570
                    +L++  F++ +N
Sbjct: 397 AFHERTAAAILVLLAFMIVMN 417


>gi|256368698|ref|YP_003106204.1| sugar ABC transporter, permease protein [Brucella microti CCM 4915]
 gi|255998856|gb|ACU47255.1| sugar ABC transporter, permease protein [Brucella microti CCM 4915]
          Length = 291

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFCGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALALTFVIQKHLV 281



 Score = 38.8 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFCGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 153 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 212

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 213 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 270

Query: 568 AL 569
           AL
Sbjct: 271 AL 272


>gi|23502988|ref|NP_699115.1| phosphate ABC transporter permease [Brucella suis 1330]
 gi|23349027|gb|AAN31030.1| phosphate ABC transporter, permease protein [Brucella suis 1330]
          Length = 436

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|254788384|ref|YP_003075813.1| phosphate ABC transporter permease PstA [Teredinibacter turnerae
           T7901]
 gi|237683888|gb|ACR11152.1| phosphate ABC transporter, permease protein PstA [Teredinibacter
           turnerae T7901]
          Length = 430

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 52/150 (34%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   +      +   +L    +S       A      AK  RL   +   ++ + ++P +
Sbjct: 204 EQAGILGALLGSLFTLLVTGSLSFPIGVAAAIYLEEYAKRSRLTDFIEVNINNLAAVPSV 263

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N +        L     +    +  +  S   ++  +P  + E +    
Sbjct: 264 IFGLLGLAIFLNFF-NMPRSMPLVGGLVLTLMTLPTIIISSRAAIKAVPPSIREAALGMG 322

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q      +P +MPG++   ++ M+  
Sbjct: 323 ASKMQMILQHVLPLAMPGMLTGAIIGMAQA 352



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 6/161 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            +   ++     ++F ++V   ++  I +   I++     R  ++  I+     LAA P+
Sbjct: 203 PEQAGILGALLGSLFTLLVTGSLSFPIGVAAAIYLEEYAKRSRLTDFIEVNINNLAAVPS 262

Query: 431 NVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +F  L ++    +   P    L   L++   T   I+ +  A   A P   +E A    
Sbjct: 263 VIFGLLGLAIFLNFFNMPRSMPLVGGLVLTLMTLPTIIISSRAAIKAVPPSIREAALGMG 322

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +  +     +LP   P  +TGAI     A   +    +  
Sbjct: 323 ASKMQMILQHVLPLAMPGMLTGAIIGMAQALGETAPLLMIG 363


>gi|161618218|ref|YP_001592105.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260567133|ref|ZP_05837603.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|161335029|gb|ABX61334.1| binding-protein-dependent transport systems inner membrane
           component [Brucella canis ATCC 23365]
 gi|260156651|gb|EEW91731.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
          Length = 291

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLASPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALALTFVIQKHLV 281



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 153 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLASPGIAS 212

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 213 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 270

Query: 568 AL 569
           AL
Sbjct: 271 AL 272


>gi|219667539|ref|YP_002457974.1| binding-protein-dependent transporters inner membrane component
           [Desulfitobacterium hafniense DCB-2]
 gi|219537799|gb|ACL19538.1| binding-protein-dependent transport systems inner membrane
           component [Desulfitobacterium hafniense DCB-2]
          Length = 225

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T   ++++ +++ L       +         + +  +   L  +++I +S P 
Sbjct: 17  LVPATGETLYMVMASTLLAYLLGVPLGVILVISSPDHISPNPWIERTLGTVINIFRSAPF 76

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +  L   ++       G  IG + A I  +F +  + +   +  SL  IP  + E + S 
Sbjct: 77  IVLL-LALIPVTQAIMGTYIGTDAAIIPLVFATAPF-VARMVESSLKEIPYGVIEAALSM 134

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S WQ    + +P +   L+    ++        ++          I   G+G      
Sbjct: 135 GSSPWQIIRKVLLPEAKASLILGAAIT-------TISVVGYTAMAGTIGAGGLGDVAIRY 187

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++    ++   + +L +I    QL 
Sbjct: 188 GHQRFRTDVMIMTVIILVIIVQLVQLF 214



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 21/206 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA----NVF 433
           T++ V+   ++A ++ +P+G+         I   P I   +     +  + P        
Sbjct: 24  TLYMVMASTLLAYLLGVPLGVILVISSPDHISPNPWIERTLGTVINIFRSAPFIVLLLAL 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P V   +   ++  +  +  L+ F T  ++   V +     P    E A S   + W+ 
Sbjct: 84  IP-VTQAIMGTYIGTDAAIIPLV-FATAPFVARMVESSLKEIPYGVIEAALSMGSSPWQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R ++LP      + GA          + ++         +   GLG        +    
Sbjct: 142 IRKVLLPEAKASLILGAAITTISVVGYTAMA-------GTIGAGGLGDVAIRYGHQRFRT 194

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYL 579
           +V++  +I+   ++ L +     L  
Sbjct: 195 DVMIMTVIILVIIVQLVQLFGTKLAR 220


>gi|13475955|ref|NP_107525.1| sugar ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14026715|dbj|BAB53311.1| sugar ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 263

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFT 119
            +Y   + +  +++ +I++          A+ R  G   V + L + +++P +   L   
Sbjct: 54  IEYFRNSLIISVTSTIIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLF 113

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            +Y          G  LA +       +W +          +P+DL E ++    + WQ 
Sbjct: 114 FLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQA 169

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +    +   LP +G     A    D  
Sbjct: 170 FWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLP-VGLLDYTAEFTIDWR 228

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 229 GMCALAVVMIIPALTLTYIVQKHLV 253



 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 61/196 (31%), Gaps = 7/196 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSY 443
           ++   V   IIA  I +  G                  +L    P      PL    V  
Sbjct: 60  SLIISVTSTIIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRL 119

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGI 502
             ++ +  L +L            +I G     P D  E A     T W+ +  +  P  
Sbjct: 120 GIIDTHFGL-ILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLA 178

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P   + AI A    WN  ++ S++           GL  Y AE T    +  +    ++
Sbjct: 179 GPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFT--IDWRGMCALAVV 236

Query: 562 MCCFVLALNRFLWHPL 577
           M    L L   +   L
Sbjct: 237 MIIPALTLTYIVQKHL 252


>gi|326332751|ref|ZP_08199012.1| proline/glycine betaine ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325949450|gb|EGD41529.1| proline/glycine betaine ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 246

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 1/140 (0%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +P            A+VI+ L           + R   ++V +    ++IP LG L   
Sbjct: 19  GVPNRILEHLSYSAVALVIAALIAIPLGLYVGHTGRGKFLVVNVAGAARAIPSLGLLFIM 78

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V+       G      +  +  +    V  +    Y  +  +     + ++   +   Q 
Sbjct: 79  VLLLGPRLSGDAAFV-VPCLVVLAVLAVPPILAGAYAGVEEVDAGARDAAKGMGMRDLQV 137

Query: 180 FWYLGVPFSMPGLVWNMMMS 199
              + +P ++P +   +  +
Sbjct: 138 LLKVELPCALPLIFSGLRSA 157



 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 3/126 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V ++IA++I IP+G+++G        +   A    A P+     ++V  +         
Sbjct: 32  AVALVIAALIAIPLGLYVGHTGRGKFLVVNVAGAARAIPSLGLLFIMVLLLGPRLSGDAA 91

Query: 451 WLSL---LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++     ++       IL    AG        ++ A    +   +    + LP   P   
Sbjct: 92  FVVPCLVVLAVLAVPPILAGAYAGVEEVDAGARDAAKGMGMRDLQVLLKVELPCALPLIF 151

Query: 508 TGAITA 513
           +G  +A
Sbjct: 152 SGLRSA 157


>gi|331673653|ref|ZP_08374416.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA280]
 gi|331068926|gb|EGI40318.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA280]
          Length = 243

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIIV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++       +  +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIIVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|302390705|ref|YP_003826526.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
 gi|302201333|gb|ADL08903.1| binding-protein-dependent transport systems inner membrane
           component [Thermosediminibacter oceani DSM 16646]
          Length = 217

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILD 105
           ++  ++ L     +T   +  +++I+  F      L          ++  L  +L  +++
Sbjct: 1   MSETLNLLLLATWQTVYMVAVSVLIATFFGIPLGVLLMVTDRGQILQNGLLNKILGTVVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P    L   ++ F     GK IG   AAI  +  + +  M   +  +L  + R +
Sbjct: 61  IFRSVP-FVILLIVLIPFTRWLVGKAIGTT-AAIVPLSVAAIPFMGRLIETALREVDRGV 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            E +++   S +Q    + +P ++P +   + ++
Sbjct: 119 IEAAQAMGASPFQIITRVLIPEALPSIAAGITIT 152



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 12/139 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V ++IA+   IP+G+         I     ++  +     +  + P  +   +V
Sbjct: 15  TVYMVAVSVLIATFFGIPLGVLLMVTDRGQILQNGLLNKILGTVVNIFRSVPFVILL-IV 73

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFN---VIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +   +  +  ++  +   I F    +            E A +   + ++  
Sbjct: 74  LIPFTRWLVGKAIGTTAAIVPLSVAAIPFMGRLIETALREVDRGVIEAAQAMGASPFQII 133

Query: 495 RYIILPGIFPYYVTGAITA 513
             +++P   P    G    
Sbjct: 134 TRVLIPEALPSIAAGITIT 152


>gi|302523795|ref|ZP_07276137.1| ABC transporter permease [Streptomyces sp. AA4]
 gi|302432690|gb|EFL04506.1| ABC transporter permease [Streptomyces sp. AA4]
          Length = 230

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 72/195 (36%), Gaps = 17/195 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           +  +  ++ Q          +A+ + L+ +   ATL  + R     +V     +  IP L
Sbjct: 22  VERNADAILQRLGEHIALTATALGVGLVLSLALATLCLRYRWFYPFVVGAAGALYVIPSL 81

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G     V      +          A+  + T  +  +  ++   +  +P ++ E +    
Sbjct: 82  GAFALLVPLLGFSF--------ATAVIPLATYTLLILIRNIVTGVQQVPTEVREAAIGMG 133

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +  +  W + +P ++P ++  + ++       V  + ++  G       G+G +I   I
Sbjct: 134 FTPRRLLWQVELPLALPVVIAGLRVAAVTTIGLVTVTSLLGKG-------GLGYFIRAGI 186

Query: 234 KEQ--DLLAILYAML 246
           +    +   I+  ++
Sbjct: 187 QTTVPNPSPIIVGVV 201



 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 11/153 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              + +  ++ + +             +   A  L   P+   F L+V  + +      +
Sbjct: 41  ATALGVGLVLSLALATLCLRYRWFYPFVVGAAGALYVIPSLGAFALLVPLLGFSFATAVI 100

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L+   +      ++ N++ G    P + +E A     T  R    + LP   P  + G 
Sbjct: 101 PLATYTLLI----LIRNIVTGVQQVPTEVREAAIGMGFTPRRLLWQVELPLALPVVIAGL 156

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             A         V+ +   G       GLG +I
Sbjct: 157 RVAAVTTIGLVTVTSLLGKG-------GLGYFI 182


>gi|111220873|ref|YP_711667.1| transporter [Frankia alni ACN14a]
 gi|111148405|emb|CAJ60077.1| hypothetical protein; putative binding-protein-dependent transport
           system inner membrane component [Frankia alni ACN14a]
          Length = 334

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 12/169 (7%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVW 148
            A+ R L   L+P +   Q++P++        +   L+ G +      ++  I      +
Sbjct: 152 MARLRVLERGLLPYVIASQTVPLVALAPLVAGWGGRLHLGGLEWQRWMSVALIAAYLAFF 211

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +   M + L     +  E+ RS+  S WQ    L +P S+P L+  + ++ +      V
Sbjct: 212 PVAVGMLRGLQAPAAESVELMRSYAASWWQTLIRLRLPASVPYLMPALRLAAASAVIGTV 271

Query: 209 ASEMIVVGDTVIPLPGIGSYI------ALAIKEQDLLAILYAMLTMLGV 251
            +E+     +     G+G  I      A +   +   A+L A +T L +
Sbjct: 272 VAEI-----STGTRGGVGRLIIDYSMSASSDATRLYDAVLGAAVTGLVM 315



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 5/164 (3%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW-----LSLLMIFGTQW 462
           +     +   + P+       P     PLV       HL    W     ++L+  +   +
Sbjct: 152 MARLRVLERGLLPYVIASQTVPLVALAPLVAGWGGRLHLGGLEWQRWMSVALIAAYLAFF 211

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +   ++ G  A   +  E+  S+  + W+    + LP   PY +     A   A   ++
Sbjct: 212 PVAVGMLRGLQAPAAESVELMRSYAASWWQTLIRLRLPASVPYLMPALRLAAASAVIGTV 271

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V+E+++     +    +   ++ S++     + VLG  +    +
Sbjct: 272 VAEISTGTRGGVGRLIIDYSMSASSDATRLYDAVLGAAVTGLVM 315


>gi|288870563|ref|ZP_06114563.2| molybdate ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288866725|gb|EFC99023.1| molybdate ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 236

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 80/205 (39%), Gaps = 29/205 (14%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF--- 123
           L   VIS++FTF     AA      KS R   +L  +L    ++P++  L  TV  F   
Sbjct: 24  LKTSVISIIFTFFLGIWAARAVIALKSERAKAILDGVL----TLPLV--LPPTVAGFFLL 77

Query: 124 -------------MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
                        + ++  K++    A + A        M  S   +   +  ++   +R
Sbjct: 78  YIFGVKRPVGKLLLAVFSYKIVFTWQATVLAAVLISFPLMYRSARGAFELVDENVLNAAR 137

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +  L   + FW + +P +MPG++   +++ + G     A+ MI  G+       +   I 
Sbjct: 138 TLGLPERKVFWKILMPMAMPGVLSGGVLAFARGLGEFGATAMIA-GNIAGKTRTLPLAIY 196

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLY 255
             +   D+      ++ ++ +  L 
Sbjct: 197 SEVAAGDMEGAGKYVVIIVAISLLI 221



 Score = 38.0 bits (87), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 1/134 (0%)

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+++  SY  +       L  +  +   +  +          +    A +  +   + + 
Sbjct: 89  LLLAVFSYKIVFTWQATVLAAVLISFPLMYRSARGAFELVDENVLNAARTLGLPERKVFW 148

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I++P   P  ++G + A          + + + G+I  +T  L   I      G     
Sbjct: 149 KILMPMAMPGVLSGGVLAFARGLGEFGATAMIA-GNIAGKTRTLPLAIYSEVAAGDMEGA 207

Query: 556 VLGVLIMCCFVLAL 569
              V+I+    L +
Sbjct: 208 GKYVVIIVAISLLI 221


>gi|268319128|ref|YP_003292784.1| Phosphate transport system permease protein pstA [Lactobacillus
           johnsonii FI9785]
 gi|262397503|emb|CAX66517.1| Phosphate transport system permease protein pstA [Lactobacillus
           johnsonii FI9785]
          Length = 296

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L           +            +      +   ++  ++ISL  
Sbjct: 20  IVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A   K      ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ Q++  +P+   +   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFN--LPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIILPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           VS ++ I +  +   +  G+   S  ++ +   +YQ    V      +++ +V+ +II+ 
Sbjct: 18  VSIVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISL 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I +  GI++         ++ I+   ++L++ P+ V   F  ++  V +      +  +
Sbjct: 78  PIALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGA 137

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L + F     +  N+       P   ++   +  ++ W+  R IILP   P  +TG I +
Sbjct: 138 LALTFFNLPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIILPAALPGILTGIILS 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 AGRIFG 203


>gi|227542731|ref|ZP_03972780.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181497|gb|EEI62469.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 312

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 101/261 (38%), Gaps = 27/261 (10%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           R F  I  +  FV+ I +I  +L  + +        +     L   +   Y        L
Sbjct: 17  RQFNRIVTIATFVIAIAVIAWVLKVLGDNGQ--LAAEKWTPFLKSTTWTTYILPGLWGTL 74

Query: 74  SAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--NL 126
            A ++S++F  +   L       K++ +      I++  ++IP+L  + F    F    +
Sbjct: 75  KAALVSIVFAIIIGALLGVGRLSKNKAIRWFCGIIVEFFRAIPVLILMIFAYSVFATYAI 134

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P   +G     +F +       +  ++   + ++P    E + +  LS  Q  W + +P
Sbjct: 135 VPSAQLG-FAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLP 193

Query: 187 FS----MPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            +    +P L+  +++++  +   + ++  E++  G            ++ +     L A
Sbjct: 194 QAVATMLPALISQLVIALKDTALGYMILYVEVVRSG-----------LMSASYYRNYLPA 242

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           ++   + M+ + F   +L  R
Sbjct: 243 LVVVAIIMIAINFGLSRLAER 263



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 13/239 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +  I W   V G    +A +     +   T+   +     G  T+   +V I+ A I
Sbjct: 29  VIAIAVIAWVLKVLGDNGQLAAEKWTPFLKSTTWTTYILPGLWG--TLKAALVSIVFAII 86

Query: 400 IWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL-MI 457
           I   +G+  +     I        +   A P  +      S  + Y + P+  L    ++
Sbjct: 87  IGALLGVGRLSKNKAIRWFCGIIVEFFRAIPVLILMIFAYSVFATYAIVPSAQLGFAGVV 146

Query: 458 FGTQWY----ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           FG   Y    I   + AG  + P    E A +  ++  +    I+LP      +   I+ 
Sbjct: 147 FGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQAVATMLPALISQ 206

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
              A   + +  +  +  + +  +GL   ++ S  +   P +V+  +IM      L+R 
Sbjct: 207 LVIALKDTALGYMILY--VEVVRSGL---MSASYYRNYLPALVVVAIIMIAINFGLSRL 260


>gi|153008105|ref|YP_001369320.1| phosphate ABC transporter inner membrane subunit PstA [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559993|gb|ABS13491.1| phosphate ABC transporter, inner membrane subunit PstA
           [Ochrobactrum anthropi ATCC 49188]
          Length = 438

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      AK  R   ++   ++ + ++P + F    +  F+
Sbjct: 223 SLYMMLIVLGLSLPIGVAASIYLEEFAKKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 282

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 283 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKTQMVFHHV 341

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 342 LPLAAPGILTGTIIGLAHA 360



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 203 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFAKKNRFTDMIEVNI 262

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 263 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 322

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 323 RAAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 360


>gi|302037731|ref|YP_003798053.1| phosphate ABC transporter auxiliary and permease protein
           [Candidatus Nitrospira defluvii]
 gi|300605795|emb|CBK42128.1| Phosphate ABC transporter, auxiliary and permease protein (modular
           protein) [Candidatus Nitrospira defluvii]
          Length = 549

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 60/154 (38%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L +    +  + F  + A      A    L  ++   ++ +  +P + F  F + +F+
Sbjct: 304 TVLMVFLMTLAVMPFGVMAAVYLREYATQGLLVRLVRIAVNNLAGVPSIVFGVFGLAFFV 363

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
               G +                G  L A   +    V  +  +  + L  +PRD  E S
Sbjct: 364 YALGGTIDHWLFPEALPNPTFGTGGILWASLTLALLTVPVVIVATEEGLSAVPRDFREGS 423

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
                + ++   ++ +P ++PG++  ++++M+  
Sbjct: 424 LGLGATKFETLRHVIIPCALPGILTGLILAMARA 457



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 33/74 (44%)

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +     LW SL +   T   ++     G SA P DF+E +     T +   R++I+P   
Sbjct: 384 FGTGGILWASLTLALLTVPVVIVATEEGLSAVPRDFREGSLGLGATKFETLRHVIIPCAL 443

Query: 504 PYYVTGAITACGGA 517
           P  +TG I A   A
Sbjct: 444 PGILTGLILAMARA 457


>gi|283469755|emb|CAQ48966.1| D-methionine transport system permease protein MetI [Staphylococcus
           aureus subsp. aureus ST398]
          Length = 219

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|288934376|ref|YP_003438435.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288889105|gb|ADC57423.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 385

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV-------YFMNLYPGKVIGAELA-AI 139
               +  R       +L+++Q+IP +      +        YF  L    V G  +A A+
Sbjct: 200 VWLWRRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPAL 259

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-M 198
            A+    +  +   +   L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+      VVA+        +I   G G+ +   +    L  +L  ++  + +  + D L
Sbjct: 320 SVQTVGMAVVAA--------LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDAL 371

Query: 259 L 259
            
Sbjct: 372 F 372



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 19/180 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLS 453
           +W+  RP   +       ++   P+   F L+++ ++                       
Sbjct: 200 VWLWRRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPAL 259

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       ++  V+ G    P D  E A++  ++  + +R + LP   P  +      
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 320 SVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|110679597|ref|YP_682604.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455713|gb|ABG31918.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 510

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 63/544 (11%), Positives = 155/544 (28%), Gaps = 67/544 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMV 77
               +A V+++G+       + +  +    + I+  I  +   L +  + TT       +
Sbjct: 4   RRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFL 63

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
              L   + A++     R   V+     ++  +P++       V        ++  A LA
Sbjct: 64  WGNLAAVLMASVVVVLPRTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALA 123

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             +  F         +M   L  +P +  ++   +          +    S+P L   + 
Sbjct: 124 VYYTTF--------LAMRVGLRAMPANWSDLMSVYGRGALATLLTVRARASLPYLFVGLQ 175

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++    +         ++G+      G+G     A++  D+ A  +++  +   + +   
Sbjct: 176 IAAPAAFL------GAMIGEFTGAERGLGVLTLRAMRSLDVEA-TWSLAVISAAMAMLLY 228

Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317
            L      W   +  +                    +   +          L   +    
Sbjct: 229 ALVGAAGRWLVGYTPDIILSPPRT-------MAHNRWTGMLQACGAALLLILLWQISMDL 281

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
             L       P + L        +                                    
Sbjct: 282 ADLNRFFAKRPADVLSYLLADAPARA---------------------------------- 307

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T    +   +   ++   + + +   P  S  + P A  L A P     PL+
Sbjct: 308 TLLRALAETTATTIPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLI 367

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  +          +++++ F          + G    P    ++  S+           
Sbjct: 368 VLALGRGATGTIAVIAVMIFF----PTFVACLQGLRQTPRAVSDLFRSYGAGPVTVLYLA 423

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            +PG+ P +   A  A   A  A   +E    G       G+G  +A ++   ++  +  
Sbjct: 424 QIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGK------GIGLLVALTSTTSNYNMLWS 477

Query: 558 GVLI 561
            ++ 
Sbjct: 478 CIVA 481


>gi|269217726|ref|ZP_06161580.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212661|gb|EEZ79001.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 226

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +        +  L  + I+         +   +RR    +  ++   +SIP LG LT
Sbjct: 20  PSGIGARLLEHMILTLGVVGIAAAIALPIGIVVGHTRRGAGFVGAVVGSARSIPTLGLLT 79

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              + F             A I A+    + ++    Y  +  I   +   + +  +S  
Sbjct: 80  IFGLIFGIGLD--------APIIALVILAIPSLLAGAYSGIQAIDPAVPAAATAIGMSPA 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P ++P +V  +  ++      VV++  +      +   G+G ++   ++  +
Sbjct: 132 QVVFRVELPLALPVIVGGLRATV----LQVVSTATLAA---YVADWGLGRFLFAGLRSHN 184

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +L   L ++ +  + + LL
Sbjct: 185 YPLMLGGSLAVIALAIVCELLL 206



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 71/213 (33%), Gaps = 11/213 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
             ++ ++ +   ++    +       M   + ++ IA+ I +P+GI +G     +  +  
Sbjct: 5   LSALRWLADSANWRGPSGIGARLLEHMILTLGVVGIAAAIALPIGIVVGHTRRGAGFVGA 64

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
                 + P      +           P + L +L I      +L    +G  A      
Sbjct: 65  VVGSARSIPTLGLLTIFGLIFGIGLDAPIIALVILAIPS----LLAGAYSGIQAIDPAVP 120

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             A++  ++  +    + LP   P  V G         + + ++   +         GLG
Sbjct: 121 AAATAIGMSPAQVVFRVELPLALPVIVGGLRATVLQVVSTATLAAYVADW-------GLG 173

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            ++       ++P ++ G L +    +     L
Sbjct: 174 RFLFAGLRSHNYPLMLGGSLAVIALAIVCELLL 206


>gi|239941602|ref|ZP_04693539.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239988067|ref|ZP_04708731.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291445046|ref|ZP_06584436.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291347993|gb|EFE74897.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 215

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MVI+ +   +   ++ +S   G + +     + +IP L     
Sbjct: 12  QQLLTDAFQHVSAVFQCMVIATVLGVIIGVVSYRSGWGGSLAITSTATILTIPSLA---- 67

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  L P   +G     I       +  +  +    L  +   L + +    +S   
Sbjct: 68  ---AIGLLIPLVGLGVAPTVITLTLYGLL-PIVRNSIVGLRGVDPSLVDAATGIGMSRTA 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + +S +     + A      G      PG+G+ I   I     
Sbjct: 124 RLCRVELPLAWPPILTGIRVS-TQMLMGIAAIAAYASG------PGLGNEIFRGIASLGS 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              +  +L     I +   L 
Sbjct: 177 ANAINQVLAGTLGIVILALLF 197



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 7/181 (3%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   ++IA+++ + +G+         S        +   P+     L++  V        
Sbjct: 25  VFQCMVIATVLGVIIGVVSYRSGWGGSLAITSTATILTIPSLAAIGLLIPLVGLGVAPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      I+ N I G         + A+   ++       + LP  +P  +TG
Sbjct: 85  ITLTLYGLL----PIVRNSIVGLRGVDPSLVDAATGIGMSRTARLCRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              +       + ++  AS   +      +   IA      +  +V+ G L +    L  
Sbjct: 141 IRVSTQMLMGIAAIAAYASGPGLGNE---IFRGIASLGSANAINQVLAGTLGIVILALLF 197

Query: 570 N 570
           +
Sbjct: 198 D 198


>gi|254700771|ref|ZP_05162599.1| phosphate ABC transporter, permease protein PstA [Brucella suis bv.
           5 str. 513]
 gi|261751280|ref|ZP_05994989.1| phosphate ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261741033|gb|EEY28959.1| phosphate ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 436

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|299821895|ref|ZP_07053783.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299817560|gb|EFI84796.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 294

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 83/215 (38%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   IF L+AF++V  +  +L + + +         +   P +      +      +  
Sbjct: 8   KIATVIFYLIAFLIVCVLAGLLGYILVKGLPEISWKFLSTPPQSFQAGGGIAPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+IS+             AK   +   +  +++++ S+P +    F  + F+   
Sbjct: 68  MLVITMIISVPIAIGAGIYMSEYAKQNWITDFVRTMIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   +  +L +IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVLSGALTLTIFNLPL--LIRVVEDALRSIPDAQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  +++  +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILG-AGRVFGEAAALIFTAGQSTPIL 219



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
           ++     CV+ G+   I  + +  I   F           G I      + + +V+ +II
Sbjct: 16  LIAFLIVCVLAGLLGYILVKGLPEISWKFLSTPPQSFQAGGGIAPEIWNSFYMLVITMII 75

Query: 397 ASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +  I I  GI++        I+  ++   ++L++ P+     +VV    +      +  S
Sbjct: 76  SVPIAIGAGIYMSEYAKQNWITDFVRTMIEVLSSLPS-----IVVGLFGFLVFVIQMGWS 130

Query: 454 LLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             ++ G     +FN       V     + P+  +E   +  ++ W     +++P   P  
Sbjct: 131 FSVLSGALTLTIFNLPLLIRVVEDALRSIPDAQREAGLALGLSRWETITRVLVPAALPAI 190

Query: 507 VTGAITACGGAWN 519
           +TG I   G  + 
Sbjct: 191 ITGVILGAGRVFG 203


>gi|161620050|ref|YP_001593937.1| phosphate ABC transporter, permease protein PstA [Brucella canis
           ATCC 23365]
 gi|254705141|ref|ZP_05166969.1| phosphate ABC transporter, permease protein PstA [Brucella suis bv.
           3 str. 686]
 gi|260567390|ref|ZP_05837860.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261755845|ref|ZP_05999554.1| phosphate ABC transporter [Brucella suis bv. 3 str. 686]
 gi|161336861|gb|ABX63166.1| phosphate ABC transporter, permease protein PstA [Brucella canis
           ATCC 23365]
 gi|260156908|gb|EEW91988.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|261745598|gb|EEY33524.1| phosphate ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 436

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|326331971|ref|ZP_08198257.1| phosphate ABC transporter, permease protein PstA [Nocardioidaceae
           bacterium Broad-1]
 gi|325950284|gb|EGD42338.1| phosphate ABC transporter, permease protein PstA [Nocardioidaceae
           bacterium Broad-1]
          Length = 351

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 11/189 (5%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F +    L+  +  ++  G            +  +T D      +A   TL +     I+
Sbjct: 85  FGVAVIPLIWLVYMVVARGAATINPEFLTYSMRSVTGDEQGGLYHALTGTLIV---TGIA 141

Query: 80  LLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            L +     + A       K  RL   +  ++D+M  IP +    F    F  +      
Sbjct: 142 ALISIPIGIMTAIYLIEYGKGNRLAKAITFLVDVMTGIPSIVAGLFAFALFTLIVGPGTR 201

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 + A+    +  +  S  + L  +P DL E + +  +  W+    + +P ++ G+
Sbjct: 202 FGFGGGV-ALSLLMIPTVVRSTEEMLKLVPDDLREAAYALGVPKWRTITRMVLPTAIGGI 260

Query: 193 VWNMMMSMS 201
           V  +++++S
Sbjct: 261 VTGVVLAIS 269



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 14/181 (7%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L    + VV   A  I  + + Y +   T  +   +      T+    +  +I+  I I 
Sbjct: 92  LIWLVYMVVARGAATINPEFLTYSMRSVTGDEQGGLYHALTGTLIVTGIAALISIPIGIM 151

Query: 404 VGIWI---GFRPHISSKIQPFAQLLAAFP-------ANVFFPLVVSCVSYYHLNPNLWLS 453
             I++   G    ++  I     ++   P       A   F L+V   + +     + LS
Sbjct: 152 TAIYLIEYGKGNRLAKAITFLVDVMTGIPSIVAGLFAFALFTLIVGPGTRFGFGGGVALS 211

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           LLMI      ++ +        P+D +E A +  +  WR    ++LP      VTG + A
Sbjct: 212 LLMIPT----VVRSTEEMLKLVPDDLREAAYALGVPKWRTITRMVLPTAIGGIVTGVVLA 267

Query: 514 C 514
            
Sbjct: 268 I 268


>gi|296133807|ref|YP_003641054.1| phosphate ABC transporter, inner membrane subunit PstA [Thermincola
           sp. JR]
 gi|296032385|gb|ADG83153.1| phosphate ABC transporter, inner membrane subunit PstA [Thermincola
           potens JR]
          Length = 292

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 75/183 (40%), Gaps = 6/183 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +  +L+  I  IL HG +             I       PQ    +   ++ +M+I++ 
Sbjct: 20  TVIALLLFLIGYILYHGAKVIDWHFLTSPPTNIAAGGGIGPQ-IFNSFYLLVLSMLITVP 78

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +     A   K+  L  ++   ++ + S+P +    F ++ F+N+       + LA 
Sbjct: 79  IGLLAGIYMAEYAKNGPLVKIIRTCIETLASLPSIVVGLFGLIIFVNMTGWGY--SILAG 136

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            FA+    +  +     +S+  + ++ +E S +   + WQ    + +P + PGL+   ++
Sbjct: 137 AFALSVINLPFIVRVTEESITGVQKEYKEGSLALGATKWQTIVKVLLPTAFPGLITGFVI 196

Query: 199 SMS 201
           S  
Sbjct: 197 SAG 199



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 11/189 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASI 399
           +   +    ++  +   I +     I  HF       +   G I   +F    L++++ +
Sbjct: 15  WAGALTVIALLLFLIGYILYHGAKVIDWHFLTSPPTNIAAGGGIGPQIFNSFYLLVLSML 74

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAA-FPANVFFP-LVVSCVSYYHLNPNLWLSLLMI 457
           I +P+G+  G      +K  P  +++          P +VV                 ++
Sbjct: 75  ITVPIGLLAGIYMAEYAKNGPLVKIIRTCIETLASLPSIVVGLFGLIIFVNMTGWGYSIL 134

Query: 458 FGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            G     + N            +    ++KE + +   T W+    ++LP  FP  +TG 
Sbjct: 135 AGAFALSVINLPFIVRVTEESITGVQKEYKEGSLALGATKWQTIVKVLLPTAFPGLITGF 194

Query: 511 ITACGGAWN 519
           + + G  + 
Sbjct: 195 VISAGRIFG 203


>gi|149201493|ref|ZP_01878468.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149145826|gb|EDM33852.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 438

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 11/145 (7%)

Query: 119 TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
            +V+   +       +I  +   I A+    +  M   MY  +  IP      ++S   +
Sbjct: 286 VLVWLGLVADESRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIPPTYLRAAKSLGAN 345

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W  FW +  P S+PG+    ++       + +  E++            G++I+  I  
Sbjct: 346 NWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTT--------GTFISNRIAY 397

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF 260
               ++ + +   LG I L   L+ 
Sbjct: 398 HISSSLNWGLAAALGTILLAVVLIL 422



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 4/139 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S     
Sbjct: 287 LVWLGLVADESRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIPPTYLRAAKSLGANN 346

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 347 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGTTGTFISNRIAYHISSSLNWG 406

Query: 551 SFPEVVLGVLIMCCFVLAL 569
               +   +  +   V+ +
Sbjct: 407 ----LAAALGTILLAVVLI 421


>gi|62290979|ref|YP_222772.1| phosphate ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82700889|ref|YP_415463.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|163844155|ref|YP_001628560.1| phosphate ABC transporter, permease protein PstA [Brucella suis
           ATCC 23445]
 gi|189025192|ref|YP_001935960.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225853567|ref|YP_002733800.1| phosphate ABC transporter permease PstA [Brucella melitensis ATCC
           23457]
 gi|237816483|ref|ZP_04595476.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           str. 2308 A]
 gi|254690274|ref|ZP_05153528.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           bv. 6 str. 870]
 gi|254694761|ref|ZP_05156589.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           bv. 3 str. Tulya]
 gi|254696389|ref|ZP_05158217.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254731303|ref|ZP_05189881.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           bv. 4 str. 292]
 gi|256045746|ref|ZP_05448624.1| phosphate ABC transporter, permease protein PstA [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256060103|ref|ZP_05450285.1| phosphate ABC transporter, permease protein PstA [Brucella neotomae
           5K33]
 gi|256112465|ref|ZP_05453386.1| phosphate ABC transporter, permease protein PstA [Brucella
           melitensis bv. 3 str. Ether]
 gi|256258527|ref|ZP_05464063.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           bv. 9 str. C68]
 gi|256262949|ref|ZP_05465481.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260546243|ref|ZP_05821983.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260563042|ref|ZP_05833528.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260755813|ref|ZP_05868161.1| phosphate ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260759036|ref|ZP_05871384.1| phosphate ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760761|ref|ZP_05873104.1| phosphate ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884838|ref|ZP_05896452.1| phosphate ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|261215088|ref|ZP_05929369.1| phosphate ABC transporter [Brucella abortus bv. 3 str. Tulya]
 gi|261324079|ref|ZP_05963276.1| phosphate ABC transporter [Brucella neotomae 5K33]
 gi|265992162|ref|ZP_06104719.1| phosphate ABC transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993900|ref|ZP_06106457.1| phosphate ABC transporter [Brucella melitensis bv. 3 str. Ether]
 gi|294851368|ref|ZP_06792041.1| phosphate ABC transporter [Brucella sp. NVSL 07-0026]
 gi|297247366|ref|ZP_06931084.1| phosphate ABC transporter, permease PstA [Brucella abortus bv. 5
           str. B3196]
 gi|306842749|ref|ZP_07475391.1| phosphate ABC transporter, permease protein PstA [Brucella sp. BO2]
 gi|62197111|gb|AAX75411.1| phosphate ABC transporter, permease protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82616990|emb|CAJ12099.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|163674878|gb|ABY38989.1| phosphate ABC transporter, permease protein PstA [Brucella suis
           ATCC 23445]
 gi|189020764|gb|ACD73486.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225641932|gb|ACO01846.1| phosphate ABC transporter, permease protein PstA [Brucella
           melitensis ATCC 23457]
 gi|237788550|gb|EEP62765.1| phosphate ABC transporter, permease protein PstA [Brucella abortus
           str. 2308 A]
 gi|260096350|gb|EEW80226.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260153058|gb|EEW88150.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260669354|gb|EEX56294.1| phosphate ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671193|gb|EEX58014.1| phosphate ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675921|gb|EEX62742.1| phosphate ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874366|gb|EEX81435.1| phosphate ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|260916695|gb|EEX83556.1| phosphate ABC transporter [Brucella abortus bv. 3 str. Tulya]
 gi|261300059|gb|EEY03556.1| phosphate ABC transporter [Brucella neotomae 5K33]
 gi|262764881|gb|EEZ10802.1| phosphate ABC transporter [Brucella melitensis bv. 3 str. Ether]
 gi|263003228|gb|EEZ15521.1| phosphate ABC transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092823|gb|EEZ16998.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|294819957|gb|EFG36956.1| phosphate ABC transporter [Brucella sp. NVSL 07-0026]
 gi|297174535|gb|EFH33882.1| phosphate ABC transporter, permease PstA [Brucella abortus bv. 5
           str. B3196]
 gi|306287093|gb|EFM58598.1| phosphate ABC transporter, permease protein PstA [Brucella sp. BO2]
 gi|326410139|gb|ADZ67204.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326539859|gb|ADZ88074.1| phosphate ABC transporter, permease protein PstA [Brucella
           melitensis M5-90]
          Length = 436

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|86146920|ref|ZP_01065239.1| ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85835372|gb|EAQ53511.1| ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 227

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           I+L+ + L +    T   +  A ++          +   +++        L  +L  +++
Sbjct: 12  ISLNGNLLLEATGETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAVVN 71

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 72  VGRSVPFLVLM-VAIIPLTKMLIGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 129

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 130 VEAAQSMGATPTQIINKVLLPEALPTIINSVTITL 164



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 67/211 (31%), Gaps = 21/211 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  I+   + IP+G+ +      G      ++  +     +  + P  V     
Sbjct: 26  TLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAVVNVGRSVPFLVLMVAI 85

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    +  +       + L +  G   ++   + +     P    E A S   T  + 
Sbjct: 86  IPLTKMLIGTFIGTTAAIVPLTI--GAIPFVARLIESALLEVPTGLVEAAQSMGATPTQI 143

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  +           + S ++     G +       G +  + T      
Sbjct: 144 INKVLLPEALPTIINSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDVT------ 197

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++   ++M   ++ + + +   L       
Sbjct: 198 -IMAVTVVMLIVLVQIIQSIGDSLVRRVDHR 227


>gi|260769642|ref|ZP_05878575.1| phosphate transport system permease protein PstC [Vibrio furnissii
           CIP 102972]
 gi|260614980|gb|EEX40166.1| phosphate transport system permease protein PstC [Vibrio furnissii
           CIP 102972]
 gi|315182354|gb|ADT89267.1| phosphate ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 300

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QY 64
             R+F  +F   A + ++ +  I    I+E+        I  I L    LP         
Sbjct: 22  KERLFHGLFLTSAVIGIVSLAVIAYFIIRESIPAFQEAGITGIVLGQDWLPPALYGVATM 81

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              + +    A+++ +    + A   A+   +R+  V+ P ++++  IP + +    L  
Sbjct: 82  IVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 141

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +P+  +E S +   S   
Sbjct: 142 IVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPKTYKEGSLALGASNIY 201

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 202 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 239



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 15/178 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 68  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAIFIAEIAPKRVADVIRPAVELLA 127

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +       N  L   +++       ++        A P  
Sbjct: 128 GIPSVVYGFFGLVIIVPLIQNIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPKT 187

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +KE + +   +       +++P      +TG I   G A   ++   +       +  
Sbjct: 188 YKEGSLALGASNIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPQ 245


>gi|256370536|ref|YP_003108047.1| phosphate ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256000699|gb|ACU49098.1| phosphate ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 436

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|206580027|ref|YP_002237452.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease protein [Klebsiella pneumoniae 342]
 gi|206569085|gb|ACI10861.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease protein [Klebsiella pneumoniae 342]
          Length = 385

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 17/166 (10%)

Query: 103 ILDIMQSIPILGFLTFTVV-------YFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSM 154
           +L+++Q+IP +      +        YF  L    V G  +A A+ A+    +  +   +
Sbjct: 215 VLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPALIALTLYALLPLVRGV 274

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-MSMSGGWFFVVASEMI 213
              L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +S+      VVA+   
Sbjct: 275 VTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVVSVQTVGMAVVAA--- 331

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +I   G G+ +   +    L  +L  ++  + +  + D L 
Sbjct: 332 -----LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 58/176 (32%), Gaps = 19/176 (10%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLSLLMI 457
            RP   +       ++   P+   F L+++ ++                       + + 
Sbjct: 204 RRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPALIALT 263

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 ++  V+ G    P D  E A++  ++  + +R + LP   P  +          
Sbjct: 264 LYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVVSVQT 323

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 324 VGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|254705411|ref|ZP_05167239.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis bv. 3 str. 686]
 gi|261756127|ref|ZP_05999836.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
 gi|261745880|gb|EEY33806.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 3 str. 686]
          Length = 291

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLASPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALALTFVIQKHLV 281



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 153 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLASPGIAS 212

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 213 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 270

Query: 568 AL 569
           AL
Sbjct: 271 AL 272


>gi|160934198|ref|ZP_02081585.1| hypothetical protein CLOLEP_03069 [Clostridium leptum DSM 753]
 gi|156866871|gb|EDO60243.1| hypothetical protein CLOLEP_03069 [Clostridium leptum DSM 753]
          Length = 279

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +  L + V+SL+     A   A+ +    +   I+ +++ +P + FL    + F NL+
Sbjct: 80  SLIVSLVSTVLSLILGLPAAYSIAREK--QHLFSGIILMIRIVPAVSFLVPWYILFTNLH 137

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              + G  L+ I       +  + + M      +P++LE+ +     S +  F  + +P 
Sbjct: 138 ---LSGTYLSLIICHLIVSLPLIVWIMIPYYETLPQELEQSAYIDGASRFGTFIRIMLPL 194

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S PG++ + +++    W   + + ++   DT      I  +I  +    D   I+ A + 
Sbjct: 195 STPGILTSGILAFIFSWNNFMFALVLCSNDTTTLPIAIYQFI--SYSNVDWGGIMCASVV 252

Query: 248 MLGVIFLYDQLLFRPMI 264
           +   I +    L R +I
Sbjct: 253 ITLPIIIISFFLQRYII 269



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 70/191 (36%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF-PLVVSCVSYY 444
           ++   +V  +++ I+ +P    I               ++   PA  F  P  +   + +
Sbjct: 80  SLIVSLVSTVLSLILGLPAAYSIAREKQ--HLFSGIILMIRIVPAVSFLVPWYILFTNLH 137

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L L +  +  +   I++ +I      P + ++ A     + +  +  I+LP   P
Sbjct: 138 LSGTYLSLIICHLIVSLPLIVWIMIPYYETLPQELEQSAYIDGASRFGTFIRIMLPLSTP 197

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             +T  I A   +WN  + + V            +  +I  S     +  ++   +++  
Sbjct: 198 GILTSGILAFIFSWNNFMFALVLCSNDTTTLPIAIYQFI--SYSNVDWGGIMCASVVITL 255

Query: 565 FVLALNRFLWH 575
            ++ ++ FL  
Sbjct: 256 PIIIISFFLQR 266


>gi|160882650|ref|ZP_02063653.1| hypothetical protein BACOVA_00603 [Bacteroides ovatus ATCC 8483]
 gi|156111965|gb|EDO13710.1| hypothetical protein BACOVA_00603 [Bacteroides ovatus ATCC 8483]
          Length = 291

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 73/196 (37%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S++    IF LL+  +V+ +  IL   I +                 +    +      T
Sbjct: 13  SQKFAFGIFRLLSLCIVLILFAILGFIIYKGIGAISWDFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   R    +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPIGVMSGIYMNEYAPKGRSVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   +  GI   S  +I +  T       IW   + T + +V   + A  I 
Sbjct: 28  IVLILFAILGFIIYKGIGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFPIG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++            I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGRSVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|118589314|ref|ZP_01546720.1| phosphate ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118438014|gb|EAV44649.1| phosphate ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 450

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 52/139 (37%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A   +   ++   +  + ++P + F    +  F+
Sbjct: 230 SLFMMLVVLFLSLPIGVAASIYLEEFAPQNKFTDLIEVNISNLAAVPSIVFGILGLAVFI 289

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +      A L     +    +  +  S   SL  +P  + + +     S  Q  ++  
Sbjct: 290 Q-FMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGIGASKMQSIFHHV 348

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 349 LPLAMPGILTGTIIGLAQA 367



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 6/163 (3%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W  I       +  +   +      ++F ++V++ ++  I +   I++      +     
Sbjct: 205 WSFITGTDASDSRPEQAGIGASMIGSLFMMLVVLFLSLPIGVAASIYLEEFAPQNKFTDL 264

Query: 421 F---AQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASA 474
                  LAA P+ VF  L ++    +   P    L   L++   T   I+ +  A   A
Sbjct: 265 IEVNISNLAAVPSIVFGILGLAVFIQFMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKA 324

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            P   ++ A     +  +   + +LP   P  +TG I     A
Sbjct: 325 VPPSIRDAALGIGASKMQSIFHHVLPLAMPGILTGTIIGLAQA 367


>gi|32487276|emb|CAD91243.1| hypothetical protein [Nonomuraea sp. ATCC 39727]
          Length = 217

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 9/184 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+++ + VG+    RP  S+     A +L   P+      ++  +        
Sbjct: 25  VAQCVLVATVLGVLVGVATYRRPRPSAFATAVAGVLFTIPSLA----MLGLLIPPLGLGV 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 ++      I+ N + G         + A    ++  R    + L   +P  +TG
Sbjct: 81  APSVTAIVLYALLPIIRNTVVGLRGVDPALVDAARGIGMSRHRSLTRVELSLAWPVILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRT-TGL----GAYIAESTEKGSFPEVVLGVLIMCC 564
              A   A   + V+   S   +  +  +GL    GA    ST  G+    +L +L   C
Sbjct: 141 IRVATQLAMGIAAVAAYVSGPGLGEQIFSGLARLGGANAVNSTLTGTIGVAILALLFDGC 200

Query: 565 FVLA 568
           FVL 
Sbjct: 201 FVLL 204



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/206 (9%), Positives = 62/206 (30%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I      +     +    +   ++++ +   +      +  R       +  ++ +IP L
Sbjct: 7   IEDRWDLIVFETVQHASMVAQCVLVATVLGVLVGVATYRRPRPSAFATAVAGVLFTIPSL 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                     + L    +      ++ AI    +  +  +    L  +   L + +R   
Sbjct: 67  A--------MLGLLIPPLGLGVAPSVTAIVLYALLPIIRNTVVGLRGVDPALVDAARGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  +    + +  + P ++  + ++          +  +         PG+G  I   +
Sbjct: 119 MSRHRSLTRVELSLAWPVILTGIRVATQLAMGIAAVAAYVSG-------PGLGEQIFSGL 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                   + + LT    + +   L 
Sbjct: 172 ARLGGANAVNSTLTGTIGVAILALLF 197


>gi|315923835|ref|ZP_07920064.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622868|gb|EFV02820.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, membrane protein [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 224

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 68/182 (37%), Gaps = 15/182 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
                      ++ SL+       L  ++RRL  +++ I   + +IP L      +    
Sbjct: 19  LLAHLAITGITLISSLVLAAALTLLIWRNRRLSAIVIQIFGAVYAIPSLALFAILIPITG 78

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
              P         A+  +     + +  ++   L  I   + E +    ++ +Q    + 
Sbjct: 79  LGMP--------TAVLVLTVYNQFLLLRNIIAGLEGINPAITEAATGMGMTPFQVLIRVQ 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P +MP +V  + ++       V+++  I      +   G+G+ +   ++  +L  ++ A
Sbjct: 131 LPLAMPAIVAGIRLA-------VISTIGIATIAATVDAGGLGTLLFQGLRAMNLYKLIGA 183

Query: 245 ML 246
            L
Sbjct: 184 TL 185



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 53/152 (34%), Gaps = 11/152 (7%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +S+ +      + A P+   F +++               L++    Q+ +L N+I
Sbjct: 46  RNRRLSAIVIQIFGAVYAIPSLALFAILIPITGLG----MPTAVLVLTVYNQFLLLRNII 101

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           AG         E A+   +T ++    + LP   P  V G   A       + ++     
Sbjct: 102 AGLEGINPAITEAATGMGMTPFQVLIRVQLPLAMPAIVAGIRLAVISTIGIATIAA---- 157

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
               +   GLG  + +     +  +++   L+
Sbjct: 158 ---TVDAGGLGTLLFQGLRAMNLYKLIGATLL 186


>gi|306843559|ref|ZP_07476160.1| phosphate ABC transporter, permease protein PstA [Brucella sp. BO1]
 gi|306276250|gb|EFM57950.1| phosphate ABC transporter, permease protein PstA [Brucella sp. BO1]
          Length = 436

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +  F+
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVFI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAALGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++    +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVFINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +  A     +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAALGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|33596674|ref|NP_884317.1| ABC transporter permease [Bordetella parapertussis 12822]
 gi|33573375|emb|CAE37359.1| probable permease component of ABC transporter [Bordetella
           parapertussis]
          Length = 569

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 72/514 (14%), Positives = 157/514 (30%), Gaps = 63/514 (12%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIG 133
           + +++ L     A    +    G +L+  L ++  I P         + F       ++ 
Sbjct: 75  SSLLASLIAVPLAYFTVRFEFRGALLIQTLGVLPLIMPPFVGAMAMQLIFGRSGSVNLLL 134

Query: 134 AEL------------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +               IF         +  ++  +L NI   +EE + +    G++ F 
Sbjct: 135 DDWLGITLPFMDGLNGVIFVESLHYFPFILMNLVVALRNIDGSMEEAAFNLGSRGFRLFC 194

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P ++PG +     S+     F      +V+G T +  P   +Y+ +     +    
Sbjct: 195 RIIFPLALPGYLAG--TSLVFVKVFDDLGTPLVLGTTNMLAP--QAYLRITQVGLEDPLG 250

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
               + M+G   L   L  R +     K       G        L          +IG  
Sbjct: 251 YVISVIMIGFSILALWLSARVL---KGKDYSTLQKGGNAIHKRRLRPVESVLAYAWIGAV 307

Query: 302 SWNFFSP----LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                SP    L  ++  +     +   +   ++  + +  +      + +  +  GV +
Sbjct: 308 LLLVLSPHLGVLLLSLASVWSYAPLPDGYTLAHYTAVFTESQGMIANTLLYCGLAAGVDV 367

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISS 416
            +       ++                    R  +  I ++ + IP + + IG+      
Sbjct: 368 VLGTAIAYLMLRTRLPA--------------RQWLDFIASAALAIPGIVLAIGYLRTFRG 413

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASA 474
              P                         L  + W+ +++ +      Y L + +A    
Sbjct: 414 VEIP---------------------GTGVLLTSSWVLIMIAYSVRRLPYALRSCVAALQQ 452

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +E A S   +  R  R I++P +    + G +T+   A      + +        
Sbjct: 453 INVSLEEAAESLGASRLRTIRRIVVPLMAGGMLAGFVTSFITAAVELSATIMLVTRDSQA 512

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             +  G Y+   +  G  P   LGVL +    + 
Sbjct: 513 PMS-YGIYLYMQSAAGRGPGAALGVLAVVAVGIG 545


>gi|312135003|ref|YP_004002341.1| phosphate ABC transporter inner membrane subunit PstC
           [Caldicellulosiruptor owensensis OL]
 gi|311775054|gb|ADQ04541.1| phosphate ABC transporter, inner membrane subunit PstC
           [Caldicellulosiruptor owensensis OL]
          Length = 284

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ IF F     +       +               +  +   +++  +  III   I +
Sbjct: 25  LITIFIFKEGFSIIKEYGLWNFILGRKWAPLSGKFGIFSMILGSIYVTLGAIIIGVPIGV 84

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWL 452
              I++G      IS  I+PF +LLA  P+ ++         PL+   +     +     
Sbjct: 85  ATAIFLGELVSEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLIRKYLGGSGFSILASS 144

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L I       + N+      + P ++KE + +   T W+  + +ILP      +   I
Sbjct: 145 IILGIM--ILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVILPAAKSGIIASII 202

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
              G A   ++   + +     +  +
Sbjct: 203 LGMGRAIGETMAVIMVAGNSPKIPNS 228



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 65/157 (41%), Gaps = 5/157 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMN 125
           T   ++  + I +        L   S ++  ++ P ++++  IP +  GF    VV  + 
Sbjct: 72  TLGAIIIGVPIGVATAIFLGELV--SEKISRLIRPFVELLAGIPSVIYGFYGLVVVVPLI 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  G  + A   I    +     ++ + S+ ++PR+ +E S +   + WQ    + 
Sbjct: 130 RKYLGGSGFSILASSIILGIMILPTIINISEVSIRSVPREYKEGSLALGATHWQTIKGVI 189

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           +P +  G++ ++++ M       +A  M+      IP
Sbjct: 190 LPAAKSGIIASIILGMGRAIGETMAVIMVAGNSPKIP 226


>gi|269794484|ref|YP_003313939.1| sugar ABC transporter permease [Sanguibacter keddieii DSM 10542]
 gi|269096669|gb|ACZ21105.1| ABC-type sugar transport system, permease component [Sanguibacter
           keddieii DSM 10542]
          Length = 306

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 98/285 (34%), Gaps = 24/285 (8%)

Query: 5   NILPPFISRRIFPNIF----------DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI 54
           +  P   SRR+ P  F           +    L+  +        +  T P  +V   P 
Sbjct: 25  DRRPSSDSRRLTPQRFVLYLTLTVLMGVFVMPLLFALSGSFKERGEIFTNPLQLVPGSPT 84

Query: 55  TLDVHSL------PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
             +  +L        + + +T     A V+S+    +     AK R  G    P+  IM 
Sbjct: 85  LENYRNLLTQQPFWSWFAMSTAVATIATVVSVFVCALAGFAFAKYRFRGK--GPLFTIMF 142

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           S   + F    V  F+ L    +     A I   + +  + +       + ++P +L E 
Sbjct: 143 SSLSIPFAVILVPLFVLLVKSGLGNPFFALIVP-WVAPAFGIFMMQQFIVQSVPDELLEA 201

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +R    S +  FW + +P   P L    + S    +   +   +IV       LP +G  
Sbjct: 202 ARIDGTSEFGIFWRVVLPLLRPSLGALGVWSFLQSYNSFLWPLVIVSDVDQYTLP-LGLN 260

Query: 229 IALAIKEQDLLAIL----YAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           I    + +    +L     A + M+ V  L  + L   +   + K
Sbjct: 261 ILYGSENRAFDLVLAGSVLASVPMIIVFLLLRKQLLEGLSAGAVK 305



 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 13/157 (8%)

Query: 427 AFP-ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + P A +  PL V  V     NP  +  ++      + I         + P++  E A  
Sbjct: 146 SIPFAVILVPLFVLLVKSGLGNP-FFALIVPWVAPAFGIFMMQQFIVQSVPDELLEAARI 204

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-----TTGLG 540
              + +  +  ++LP + P           G W+         W  + +      T  LG
Sbjct: 205 DGTSEFGIFWRVVLPLLRPSL------GALGVWSFLQSYNSFLWPLVIVSDVDQYTLPLG 258

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
             I   +E  +F  V+ G ++    ++ +   L   L
Sbjct: 259 LNILYGSENRAFDLVLAGSVLASVPMIIVFLLLRKQL 295


>gi|145221801|ref|YP_001132479.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|145214287|gb|ABP43691.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
          Length = 224

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 73/199 (36%), Gaps = 12/199 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L           L  +V+ LL       L  ++  L  +      I+ +IP L       
Sbjct: 11  LWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTIPSLALF---- 66

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              + L     I  E   I A+    V  +  ++ ++L  +   + + + +       + 
Sbjct: 67  -VVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYRPLTRM 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L+ ++ +        V    M+ VG  VI + G+G++     +      
Sbjct: 126 LKVELPLALPVLIASLRV------VAVTNISMVAVGS-VIGIGGLGTWFTEGYQANKSDQ 178

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+  ++ +  +  + D L+
Sbjct: 179 IIAGIVAIFVLAIVIDTLI 197



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 8/192 (4%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L  I +   ++ I++  +I +P+G  +     +       A ++   P+   F +V+  +
Sbjct: 14  LTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTIPSLALF-VVLPLI 72

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               +     + + +   T   ++  V     A      + A++           + LP 
Sbjct: 73  IPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYRPLTRMLKVELPL 132

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +           +   V  V   G       GLG +  E  +     +++ G++ 
Sbjct: 133 ALPVLIASLRVVAVTNISMVAVGSVIGIG-------GLGTWFTEGYQANKSDQIIAGIVA 185

Query: 562 MCCFVLALNRFL 573
           +    + ++  +
Sbjct: 186 IFVLAIVIDTLI 197


>gi|239928205|ref|ZP_04685158.1| ABC transporter permease [Streptomyces ghanaensis ATCC 14672]
 gi|291436536|ref|ZP_06575926.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339431|gb|EFE66387.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672]
          Length = 233

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 66/165 (40%), Gaps = 14/165 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + RRL   ++    ++ +IP L F    + Y           +EL  +  +    +  + 
Sbjct: 46  RFRRLYPPMLGATTVLYAIPSLAFFVVLIDYTGQ--------SELTVMIPLAVYSLVVLV 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++   + ++P +    + +      +++  + +P + P +V  + ++ +          
Sbjct: 98  PAIVDGVRSVPGETLAAATAMGFGPVRRYLQVQLPIAAPAIVAGLRVATASS------IS 151

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
           ++ VG  +     +G+ +A A K       + A++TM  +  L D
Sbjct: 152 LVSVGALIGNQGALGNLLAAAQKYDRPELAVNAVITMAALAILCD 196



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L A P+  FF +++       L   + L++  +      I    + G  + P +    A
Sbjct: 60  VLYAIPSLAFFVVLIDYTGQSELTVMIPLAVYSLVVLVPAI----VDGVRSVPGETLAAA 115

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           ++      R +  + LP   P  V G   A   + +   V  +            LG  +
Sbjct: 116 TAMGFGPVRRYLQVQLPIAAPAIVAGLRVATASSISLVSVGALIGNQGA------LGNLL 169

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
           A + +       V  V+ M    +  +
Sbjct: 170 AAAQKYDRPELAVNAVITMAALAILCD 196


>gi|170680189|ref|YP_001742996.1| quaternary amine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|170517907|gb|ACB16085.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia coli SMS-3-5]
          Length = 243

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIIV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGMPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++       +  +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIIVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G  I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGMPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|253735195|ref|ZP_04869360.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253726859|gb|EES95588.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 219

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLVQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLVQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|81428724|ref|YP_395724.1| methionine ABC transporter transmembrane protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610366|emb|CAI55416.1| Putative methionine ABC transporter, membrane-spanning subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 229

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIM 107
           +D  ++ +    T      ++++  +  F+   +           SR L  ++   +++ 
Sbjct: 16  IDWPTMWEATGETVWLTAVSVLLVAILGFLLGLVLYQTNGKMDFMSRLLNGIVALFVNVF 75

Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           +S+P    L   ++       G +IG + AAI A+  S        +  +   +   + E
Sbjct: 76  RSVP-FIILIVLLIPMTKELMGTMIGPK-AAIPALIVSAAPFYARLVELAFREVDSGVIE 133

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            +R+   S WQ  W + +P SMP LV  + ++      +   + +I  G 
Sbjct: 134 ATRALGASKWQIIWQVLLPESMPALVSGLTVTAISLLGYTAMAGVIGAGG 183



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 62/179 (34%), Gaps = 5/179 (2%)

Query: 373 YQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           ++     +WL  +++  V ++  ++  +++   G        ++  +  F  +  + P  
Sbjct: 22  WEATGETVWLTAVSVLLVAILGFLLGLVLYQTNGKMDFMSRLLNGIVALFVNVFRSVPFI 81

Query: 432 VFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           +   L++     +    + P   +  L++    +Y    V        +   E   +   
Sbjct: 82  ILIVLLIPMTKELMGTMIGPKAAIPALIVSAAPFYARL-VELAFREVDSGVIEATRALGA 140

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + W+    ++LP   P  V+G           + ++ V   G +       G    ++T
Sbjct: 141 SKWQIIWQVLLPESMPALVSGLTVTAISLLGYTAMAGVIGAGGLGNLAYTEGFQANQNT 199


>gi|288956867|ref|YP_003447208.1| phosphate transport system permease protein [Azospirillum sp. B510]
 gi|288909175|dbj|BAI70664.1| phosphate transport system permease protein [Azospirillum sp. B510]
          Length = 434

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 58/140 (41%), Gaps = 6/140 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           + L +L  M +S+      A      AAK+R  G ++   ++ + ++P + F    +  F
Sbjct: 219 SLLTLLVTMALSVPVGVAAAVYLEEFAAKNRWTG-LIEVTINNLAAVPSVIFGLLGLAVF 277

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +  + G    A L     +    +  +  S   +L  +P  + + + +   S  Q   + 
Sbjct: 278 LGFF-GMPRSAPLVGGLVMALMTLPVIIISARVALRAVPPSIRDAALAIGASPLQTVLHH 336

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P +MP ++   ++ M+  
Sbjct: 337 VLPLAMPAILTGTIIGMARA 356



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 69/205 (33%), Gaps = 6/205 (2%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
                   + +S         ++   A+   + +  +        +   +      ++  
Sbjct: 163 RRDLPEGERGLSDAKVAAADALLASGALAQGFNTTLFTAGDSREPEQAGIGGALVGSLLT 222

Query: 390 VVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++V + ++  + +   +++     +   +  I+     LAA P+ +F  L ++    +  
Sbjct: 223 LLVTMALSVPVGVAAAVYLEEFAAKNRWTGLIEVTINNLAAVPSVIFGLLGLAVFLGFFG 282

Query: 447 NPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            P    L   L+M   T   I+ +      A P   ++ A +   +  +   + +LP   
Sbjct: 283 MPRSAPLVGGLVMALMTLPVIIISARVALRAVPPSIRDAALAIGASPLQTVLHHVLPLAM 342

Query: 504 PYYVTGAITACGGAWNASIVSEVAS 528
           P  +TG I     A   +    +  
Sbjct: 343 PAILTGTIIGMARALGETAPLLMIG 367


>gi|283832446|ref|ZP_06352187.1| inner membrane ABC transporter permease protein YehW [Citrobacter
           youngae ATCC 29220]
 gi|291072106|gb|EFE10215.1| inner membrane ABC transporter permease protein YehW [Citrobacter
           youngae ATCC 29220]
          Length = 243

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + +I++L          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALSHFALVGISSLIAVLIGTGAGIAVTRPWGAEFRPMVETIAAVGQTFPPVAVLAIAV-- 107

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P    G E A I  I    +  +  +    L  I   + E++    +S  Q+   
Sbjct: 108 -----PVMGFGLEPAVIALILYGVL-PILQATLAGLGGISASVMEIASGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFR 261
              L +     + D+   R
Sbjct: 215 QGALLVALAAVIVDRGFER 233



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L       V +  +IA +I    GI +       ++ +P  + +AA    FP      + 
Sbjct: 49  LALSHFALVGISSLIAVLIGTGAGIAV--TRPWGAEFRPMVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +      + L L  +      IL   +AG         E+AS   ++  +  R +
Sbjct: 107 VPVMGFGLEPAVIALILYGVL----PILQATLAGLGGISASVMEIASGMGMSRGQRLRKV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +    LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           G L++    + ++R     L  Y TR ++
Sbjct: 216 GALLVALAAVIVDRGF-ERLASYLTRHVK 243


>gi|160882140|ref|ZP_02063143.1| hypothetical protein BACOVA_00083 [Bacteroides ovatus ATCC 8483]
 gi|156112481|gb|EDO14226.1| hypothetical protein BACOVA_00083 [Bacteroides ovatus ATCC 8483]
          Length = 240

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 85/233 (36%), Gaps = 9/233 (3%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           ++I +  I+++   + +    + +         ++      +    +   ++ +L  +  
Sbjct: 1   MIIPLFLIVVYAFTDDSGHLTLANFQKFFEHPEAI-NTFVYSIGIAIITTLVCILLGYPA 59

Query: 87  ATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
           A + + S+      + +L I+   + IL     TV  F       V   E A IF +  +
Sbjct: 60  AWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF---SVPLGEGALIFGMVYN 116

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  M + +Y +L  +     E ++    +  Q F    +P SMPG++  +MM       
Sbjct: 117 FIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFLKAVLPLSMPGVMSGIMMVFMPTIS 176

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               +E++ + +  +     G+ I   I            L ML +I      
Sbjct: 177 TFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLLLIAATSLF 225


>gi|331270111|ref|YP_004396603.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum BKT015925]
 gi|329126661|gb|AEB76606.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium botulinum BKT015925]
          Length = 212

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 70/176 (39%), Gaps = 10/176 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T   +  + +++++  F+ A +           +  +  +L  +++I++S P 
Sbjct: 5   LVPALWETLFMVFISTILAIIVGFIPAIIMIITHKDGLKPNEVVYKILDIVVNILRSFP- 63

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++       GK  G   AAI  +       +T  +  SL  +   + E ++SF
Sbjct: 64  FIILMIILIPLTKFIIGKSTGTT-AAIVPLTIGCAPFVTRIIESSLKEVDNGVVEAAKSF 122

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
             S +Q  + + +P ++P ++  M +++     F   + +I  G         G Y
Sbjct: 123 GASTFQIVFKVMLPEALPSIISGMTLTLISMVGFSAMAGVIGAGGLGAVAMNYGYY 178



 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 10/167 (5%)

Query: 386 TMFRVVVLIIIASIIW-IPVGIWI-----GFRP--HISSKIQPFAQLLAAFPANVFFPLV 437
           T+F V +  I+A I+  IP  I I     G +P   +   +     +L +FP  +   ++
Sbjct: 12  TLFMVFISTILAIIVGFIPAIIMIITHKDGLKPNEVVYKILDIVVNILRSFPFIILMIIL 71

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +                 + +  G   ++   + +      N   E A SF  + ++   
Sbjct: 72  IPLTKFIIGKSTGTTAAIVPLTIGCAPFVTRIIESSLKEVDNGVVEAAKSFGASTFQIVF 131

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            ++LP   P  ++G           S ++ V   G +       G Y
Sbjct: 132 KVMLPEALPSIISGMTLTLISMVGFSAMAGVIGAGGLGAVAMNYGYY 178


>gi|256849461|ref|ZP_05554893.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-1A-US]
 gi|262046130|ref|ZP_06019093.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-3A-US]
 gi|256713577|gb|EEU28566.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-1A-US]
 gi|260573460|gb|EEX30017.1| phosphate ABC transporter, permease PstC [Lactobacillus crispatus
           MV-3A-US]
          Length = 302

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  + I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLFICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244



 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 60/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ + I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLFICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFATSLL 247


>gi|330825979|ref|YP_004389282.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329311351|gb|AEB85766.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 576

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 69/523 (13%), Positives = 152/523 (29%), Gaps = 67/523 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFM-- 124
           +    L++   + +     A L  +    G +L+  L ++  I P         + F   
Sbjct: 78  SLWVALASTFFASVIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVALQLIFGRS 137

Query: 125 ----------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                       +   V+   +   F         +  ++  ++ NI   +EE + +   
Sbjct: 138 GSVNLLLDDWLGFTVPVMDGLVGVTFVESIHYFPFILLNLVAAMRNIDGAMEESALNLGA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G + F  +  P +MPG +    +     +  +    ++ V + + P     +Y+ +   
Sbjct: 198 RGLRLFRRVIFPLAMPGYLAGAALVFVKVFDDLGTPLVMGVSNMLAPQ----AYLRITSV 253

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
             D        + M+G   L   L  R M               Y          +K   
Sbjct: 254 GVDDPLGYVISVIMIGFSILALWLAARVM-----------KGRDYATLQKGGNALQKRRL 302

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
            R+    ++ +   +   V      + ++ F    +F  L     + +   +F       
Sbjct: 303 GRWESLLAYGWILLVLAVVLAPHAGILLMSFAKVWSFSVLPDAYTLEHYATVF------- 355

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH- 413
                                      +   T+   ++   +  +I   +   I      
Sbjct: 356 ----------------------SDAGGMIGNTLLYCLLAAGLDVVIGTAIAYLILRTRLP 393

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN------LWLSLLMIFGT--QWYIL 465
               +   A    A P  V     +       L  +       W+ +++ +      Y L
Sbjct: 394 ARQWLDWLASAALAIPGLVLAIGYLRLFKGVQLPGSDRLVVQTWVLIMLAYAVRRLPYAL 453

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            + +A         +E A S   +     R +++P +    + G +T+   A    + + 
Sbjct: 454 RSCMAALQQVHVSLEEAAQSLGASRLSTMRRVMVPLMAGGILAGFVTSFITA-AVELSAT 512

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           +            LG Y+   +  G  P   LGVL +    L 
Sbjct: 513 LVLVSTESQAPMSLGIYLYMQSIAGRGPGAALGVLAVAVVGLG 555



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 10/243 (4%)

Query: 20  FDLLAFVLVI----GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           + LL   +V+    GI+ +    +   +V  D   +                T L  L A
Sbjct: 313 WILLVLAVVLAPHAGILLMSFAKVWSFSVLPDAYTLEHYATVFSDAGGMIGNTLLYCLLA 372

Query: 76  MVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNL-YPGKVIG 133
             + ++     A L  ++R      L  +     +IP L      +  F  +  PG    
Sbjct: 373 AGLDVVIGTAIAYLILRTRLPARQWLDWLASAALAIPGLVLAIGYLRLFKGVQLPGSDRL 432

Query: 134 AELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                +  +    V  + +++     +L  +   LEE ++S   S       + VP    
Sbjct: 433 VVQTWVLIMLAYAVRRLPYALRSCMAALQQVHVSLEEAAQSLGASRLSTMRRVMVPLMAG 492

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G++   + S       + A+ ++V  ++  P+  +G Y+ +             +L +  
Sbjct: 493 GILAGFVTSFITAAVELSATLVLVSTESQAPMS-LGIYLYMQSIAGRGPGAALGVLAVAV 551

Query: 251 VIF 253
           V  
Sbjct: 552 VGL 554



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 24/213 (11%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLG 383
                          +++ L + +      + +G + + +        T           
Sbjct: 10  ARARSPRTLASPGPLIAFGLILAFLLCFLVLPVGTVIYTAFVTETGAPTLGHFGNFFGQL 69

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   +++  +     AS+I +P+           + +     +L          + 
Sbjct: 70  VFRESFFNSLWVALASTFFASVIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVA 129

Query: 438 VSCVSYYHLNPNLWL-----------------SLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +  +     + NL L                 + +       +IL N++A         +
Sbjct: 130 LQLIFGRSGSVNLLLDDWLGFTVPVMDGLVGVTFVESIHYFPFILLNLVAAMRNIDGAME 189

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           E A +    G R +R +I P   P Y+ GA   
Sbjct: 190 ESALNLGARGLRLFRRVIFPLAMPGYLAGAALV 222


>gi|258515191|ref|YP_003191413.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257778896|gb|ACV62790.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 344

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 99/259 (38%), Gaps = 23/259 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA   V G+         +    R +    P+   +  +      + + +  +  +S++ 
Sbjct: 85  LATFTVSGVNAWNFLFQTQWMPDRPMEQGGPLVGSLSFIIGSLLVSLMAVAVSGPLSVIV 144

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAA 138
                 +A        VL P ++I+  IP + +    L+  V +  N   G+  G  L A
Sbjct: 145 AVFMVEIA--PGWGQRVLQPAIEILAGIPSVVYGYVGLSLLVPFIRNYMGGE--GFSLLA 200

Query: 139 IFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            F + +  +     S+   SL  +P   +E S +   + WQ    + VP +  G++  ++
Sbjct: 201 GFIVLSIMILPTIISVSSDSLRALPSQWKEASLALGATRWQTISMVLVPAARSGIITGVV 260

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGI--------------GSYIALAIKEQDLLAILY 243
           + ++  +   +A +M++     IP   +              G+ I  ++    L ++  
Sbjct: 261 LGLARAFGEALAVQMVIGNTRQIPYSILDPLMTLTSAITMDMGNTIMGSLWNNALWSMGL 320

Query: 244 AMLTMLGVIFLYDQLLFRP 262
            +L M  +  L  +L+ R 
Sbjct: 321 LLLMMSFMFILIIKLVVRR 339



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 81/221 (36%), Gaps = 25/221 (11%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
           ++I    +++  V V   ++ I+ +  V I  G        +QP  ++LA  P+ V+  +
Sbjct: 122 FIIGSLLVSLMAVAVSGPLSVIVAVFMVEIAPG---WGQRVLQPAIEILAGIPSVVYGYV 178

Query: 437 VVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHIT 489
            +S +             +L    +++       + +V      A P+ +KE + +   T
Sbjct: 179 GLSLLVPFIRNYMGGEGFSLLAGFIVLSIMILPTIISVSSDSLRALPSQWKEASLALGAT 238

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL---------- 539
            W+    +++P      +TG +     A+  ++  ++       +  + L          
Sbjct: 239 RWQTISMVLVPAARSGIITGVVLGLARAFGEALAVQMVIGNTRQIPYSILDPLMTLTSAI 298

Query: 540 ----GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576
               G  I  S    +   + L +L+M    + + + +   
Sbjct: 299 TMDMGNTIMGSLWNNALWSMGLLLLMMSFMFILIIKLVVRR 339


>gi|192288568|ref|YP_001989173.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282317|gb|ACE98697.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 257

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 67/231 (29%), Gaps = 13/231 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              +    +     +L   W          +       ++  +       V      T  
Sbjct: 4   SARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLETAG 63

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
              +  II  +I    G+  G R      +QP A +L   PA  +  L +          
Sbjct: 64  NAGLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGR---- 119

Query: 449 NLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             W  ++ +      +LF     G  +       +A  + +        +  P +  +  
Sbjct: 120 --WAVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPLSARLTEVYGPQLLSHLF 177

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
              +T    +W  ++++E+ +         G+G  +A +       E +  
Sbjct: 178 PALVTTLAMSWKVAVMAELLAG------AGGIGDGLATARAHVDTAETMAW 222



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 74/229 (32%), Gaps = 23/229 (10%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY------ASRTTLRM 72
                  ++ I ++  L         P  +  +    L +  + +          T    
Sbjct: 6   RVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLETAGNA 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +I +L       LA         L P+  I+  +P + ++   +++F   +   V 
Sbjct: 66  GLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRWAVVVT 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            A               M F+   + + ++   L  +++ +++    +   +  P  +  
Sbjct: 126 VAAATG----------PMLFAAALEGVRSLDGTLARMAQVYQVPLSARLTEVYGPQLLSH 175

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           L   ++ +++  W   V +E++          GIG  +A A    D   
Sbjct: 176 LFPALVTTLAMSWKVAVMAELLAGAG------GIGDGLATARAHVDTAE 218


>gi|296536524|ref|ZP_06898612.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296263145|gb|EFH09682.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 272

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 6/160 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + +   +A  +++L         AK R     +  ++ I +  P L +L    + F
Sbjct: 68  YTWNSIIVSFTATGLAILIGVPAGYGIAKMRATRAAM--LILIARITPGLSYLIPLFLLF 125

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +   +     I       +    ++ L   P +LEE +     + WQ F ++
Sbjct: 126 QWLGLTGTLTPIIITHLVITVPITVWVMIGFFEGL---PAELEEAALVDGANIWQAFRHV 182

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             P + PG+   +++S    W   + + M++ G     LP
Sbjct: 183 AFPLARPGITVAVILSFIFSWNNFIFA-MVLAGRETRTLP 221



 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 3/143 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
                +A +I +P G  I       + +     +    P   +   +     +  L   L
Sbjct: 77  FTATGLAILIGVPAGYGIAKMRATRAAM--LILIARITPGLSYLIPLFLLFQWLGLTGTL 134

Query: 451 WLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              ++        I   V+ G     P + +E A       W+ +R++  P   P     
Sbjct: 135 TPIIITHLVITVPITVWVMIGFFEGLPAELEEAALVDGANIWQAFRHVAFPLARPGITVA 194

Query: 510 AITACGGAWNASIVSEVASWGHI 532
            I +   +WN  I + V +    
Sbjct: 195 VILSFIFSWNNFIFAMVLAGRET 217


>gi|66043618|ref|YP_233459.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63254325|gb|AAY35421.1| Binding-protein-dependent transport systems inner membrane
           component [Pseudomonas syringae pv. syringae B728a]
 gi|330971794|gb|EGH71860.1| binding-protein dependent transport system inner membrane protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 214

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYAAPGINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYAAPGINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|312898761|ref|ZP_07758150.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
 gi|310620192|gb|EFQ03763.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
          Length = 217

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L Q    T   +  + +I+ +       L           +  +  V   I++I++S+P 
Sbjct: 9   LLQGVEETIFMVAVSGIIATVIGIPLGILLVTTDKGHILENAPINRVFGTIVNIIRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG  LAA   +    +  ++  +  S+ +I   L E ++S 
Sbjct: 68  FIILMVAIIPFTKLVAGTSIGT-LAACVPLTIVAIPFLSRLVETSVRDIDYGLIEAAQSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             + +Q    + +P ++P ++ N+
Sbjct: 127 GATPFQIIRKVLLPEALPTIINNI 150



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 21/194 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T+F V V  IIA++I IP+GI +             I+        ++ + P  +     
Sbjct: 16  TIFMVAVSGIIATVIGIPLGILLVTTDKGHILENAPINRVFGTIVNIIRSVPFIILMVAI 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P                + L ++       L               E A S   T ++ 
Sbjct: 76  IPFTKLVAGTSIGTLAACVPLTIVAIPFLSRLVETS--VRDIDYGLIEAAQSMGATPFQI 133

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R ++LP   P  +            +S ++     G +       G        +    
Sbjct: 134 IRKVLLPEALPTIINNITVLIVSLIGSSAMAGAVGGGGLGDIAIRYGY-------QRFRT 186

Query: 554 EVVLGVLIMCCFVL 567
           +V+L  +++    +
Sbjct: 187 DVMLATIVILIIGV 200


>gi|229828903|ref|ZP_04454972.1| hypothetical protein GCWU000342_00988 [Shuttleworthia satelles DSM
           14600]
 gi|229792066|gb|EEP28180.1| hypothetical protein GCWU000342_00988 [Shuttleworthia satelles DSM
           14600]
          Length = 207

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 76/194 (39%), Gaps = 15/194 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +    +   ++IS+    +   +  K  R   + + +   + SIP L         F  
Sbjct: 16  LQHLQIVALTLLISIALASLICLVLLKFPRASNICIQVFSAIYSIPSLAL-------FAI 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P   +G   A +  +  +Q + +  ++   L  +   + E +    ++  Q    + +
Sbjct: 69  LIPLTGLGRGTAILVLVLYNQ-YLLVRNIMTGLTQVDPAILEAASGMGMTHMQMICRVQI 127

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P +V  + ++       +V++  I      I   G+GS +   ++  ++  I +A 
Sbjct: 128 PLAAPMIVAGIKLA-------IVSTTGIATIAATINAGGLGSLLFSGMRTMNVPKIAFAT 180

Query: 246 LTMLGVIFLYDQLL 259
           +  + +  L + +L
Sbjct: 181 ILCMFIAELANVIL 194



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 11/187 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V + ++I+  +   + + +   P  S+        + + P+   F +++        
Sbjct: 19  LQIVALTLLISIALASLICLVLLKFPRASNICIQVFSAIYSIPSLALFAILIPLTGLGRG 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                  L+++   Q+ ++ N++ G +       E AS   +T  +    + +P   P  
Sbjct: 79  T----AILVLVLYNQYLLVRNIMTGLTQVDPAILEAASGMGMTHMQMICRVQIPLAAPMI 134

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           V G   A        + +   +     +   GLG+ +       + P++    ++     
Sbjct: 135 VAGIKLAI-------VSTTGIATIAATINAGGLGSLLFSGMRTMNVPKIAFATILCMFIA 187

Query: 567 LALNRFL 573
              N  L
Sbjct: 188 ELANVIL 194


>gi|322831618|ref|YP_004211645.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321166819|gb|ADW72518.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 217

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T +  L++     +    +  L         A+++ +  V+  +++I +SIP    L  
Sbjct: 15  ETVIMTLTSGFFGFVLGLPFGVLLYVTRPGQIAENKNIYRVMSALVNIFRSIP-FIILLV 73

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  Q
Sbjct: 74  WMIPFTRMIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGLV    +++
Sbjct: 133 IIRKILLPEALPGLVNAATITL 154



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+   +       ++ +P G+         I    +I   +     +  + P     V+ 
Sbjct: 16  TVIMTLTSGFFGFVLGLPFGVLLYVTRPGQIAENKNIYRVMSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E A +   T  +  
Sbjct: 76  IPFTRMIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPSGLVEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R I+LP   P  V  A          S +      G +       G    ++T
Sbjct: 135 RKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYDAT 187


>gi|308273631|emb|CBX30233.1| hypothetical protein N47_D30420 [uncultured Desulfobacterium sp.]
          Length = 307

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 75/192 (39%), Gaps = 10/192 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYASRTTLRMLS 74
              + +     LV+  I +  +         + +   PI ++    +      T    + 
Sbjct: 41  LAALINCAGLFLVVSFIALKGYKAISW----EFLTQPPIDSMTKGGILPCIIGTLCLGIG 96

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +++++L      A    +    G +L  I   +  +  +P + F  F   +F+     K+
Sbjct: 97  SIIVALPIGVASAIYLNEYASPGRILRLIRLSISNLAGVPSVVFGLFGFAFFVIYL--KM 154

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
             + LA +  + +  +  +  S  ++L ++P    E S +   + WQ  + + +P ++PG
Sbjct: 155 GVSILAGVLTLASLTLPVIIGSTEEALKSVPDTYREASLALGATRWQTIYRVVLPAALPG 214

Query: 192 LVWNMMMSMSGG 203
            +   ++ +S  
Sbjct: 215 TLTGAILGLSRA 226



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R++ +++     +V        +++I +        D +    +    +  + + I  + 
Sbjct: 40  RLAALINCAGLFLVVSFIALKGYKAISWEFLTQPPIDSMTKGGILPCIIGTLCLGIG-SI 98

Query: 399 IIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPN 449
           I+ +P+G+              I   I+     LA  P+ VF  F      +        
Sbjct: 99  IVALPIGVASAIYLNEYASPGRILRLIRLSISNLAGVPSVVFGLFGFAFFVIYLKMGVSI 158

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L +   T   I+ +      + P+ ++E + +   T W+    ++LP   P  +TG
Sbjct: 159 LAGVLTLASLTLPVIIGSTEEALKSVPDTYREASLALGATRWQTIYRVVLPAALPGTLTG 218

Query: 510 AITACGGA 517
           AI     A
Sbjct: 219 AILGLSRA 226


>gi|306833711|ref|ZP_07466838.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
 gi|304424481|gb|EFM27620.1| proline/glycine betaine ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
          Length = 208

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 76/187 (40%), Gaps = 19/187 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++ +LLF  V   +     ++ +  V +L ++ +IP     T  +       P   +G 
Sbjct: 26  SLLFALLFASVITVILLFYPKIRLASVYVLSLLYAIPSFALFTLLI-------PVTGLGT 78

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I  +  +Q + +  +    L  +   + E +    ++ WQ    + +P +   +  
Sbjct: 79  RTAIIVLVIYAQ-YTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILAKIQLPLAQSSIFA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + ++         AS MI +    + I   G+GS +   ++   L  +L+ ++  + + 
Sbjct: 138 GLRLA---------ASSMIAIATIASTINAGGLGSILFDGLRTMSLPKLLWGIILTVALS 188

Query: 253 FLYDQLL 259
            L + +L
Sbjct: 189 LLVNLIL 195



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 73/190 (38%), Gaps = 15/190 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T F ++  ++ AS+I + +       P I         LL A P+   F L++      
Sbjct: 22  LTSFSLLFALLFASVITVILLF----YPKIRLASVYVLSLLYAIPSFALFTLLIPVTGLG 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++++   Q+ ++   +AG +   +   E A+   +T W+    I LP    
Sbjct: 78  TRT----AIIVLVIYAQYTLVRTFLAGLTQVDDSIVEAATGMGMTRWQILAKIQLPLAQS 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A       + ++         +   GLG+ + +     S P+++ G+++   
Sbjct: 134 SIFAGLRLAASSMIAIATIA-------STINAGGLGSILFDGLRTMSLPKLLWGIILTVA 186

Query: 565 FVLALNRFLW 574
             L +N  L+
Sbjct: 187 LSLLVNLILY 196


>gi|237798042|ref|ZP_04586503.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020893|gb|EGI00950.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 214

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L Q    T L +  + +I+LL     A +   S +        +   L   +++ +SIP 
Sbjct: 6   LLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRALGGFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P + PG+V    +++
Sbjct: 124 GCRRWHIIWHVLLPEARPGIVGGFTITL 151



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPAINRALGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEARPGIVGGFTITLVTMINSS 158


>gi|297559634|ref|YP_003678608.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844082|gb|ADH66102.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 322

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 84/209 (40%), Gaps = 4/209 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTF 118
           +  Q+   +    ++++ +    + + A   A+ R RL    + +L ++Q +P+   +  
Sbjct: 104 NFWQFLGNSLFLTVASVAMGAFLSLLAAVAVARFRFRLRTAFIILLLVIQMVPMEAMIIS 163

Query: 119 TVVYF--MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLS 175
             + F  ++   G  +   L+ +  ++T+    +T  M +  +  +P++LEE +     S
Sbjct: 164 IFINFRQLSDVSGVELLGNLSGLLIVYTAVSLPITIMMLRGFVAAVPKELEEAAAIDGAS 223

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            W  FW + +P   PGLV   + +    W   + +   +   T      +          
Sbjct: 224 SWTVFWRILMPLVAPGLVAASIFAFITAWNEFIVALTFLGRSTDNYTLPLTLSYYFGRFG 283

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            +   I+ A   +   + ++   + R M+
Sbjct: 284 TEWGPIMAASTLLTIPVMIFFLFVQRRMV 312



 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV----VS 439
            +T+  V +   ++ +  + V  +          +    Q++    A +    +    +S
Sbjct: 114 FLTVASVAMGAFLSLLAAVAVARFRFRLRTAFIILLLVIQMV-PMEAMIISIFINFRQLS 172

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYII 498
            VS   L  NL   L++       I   ++ G  +A P + +E A+    + W  +  I+
Sbjct: 173 DVSGVELLGNLSGLLIVYTAVSLPITIMMLRGFVAAVPKELEEAAAIDGASSWTVFWRIL 232

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P + P  V  +I A   AWN  IV+           T  L            +  ++  
Sbjct: 233 MPLVAPGLVAASIFAFITAWNEFIVALTFLGRSTDNYTLPLTLSYYFGRFGTEWGPIMAA 292

Query: 559 VLIMCCFVLALNRFLWHPL 577
             ++   V+    F+   +
Sbjct: 293 STLLTIPVMIFFLFVQRRM 311


>gi|148979798|ref|ZP_01815705.1| ABC transporter, permease protein [Vibrionales bacterium SWAT-3]
 gi|145961592|gb|EDK26892.1| ABC transporter, permease protein [Vibrionales bacterium SWAT-3]
          Length = 227

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           I+L+ + L +    T   +  A ++          +   +++        L  +L  +++
Sbjct: 12  ISLNGNLLLEATGETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNQILGAVVN 71

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 72  VGRSVPFLVLM-VAIIPLTKMLIGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 129

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 130 VEAAQSMGATPTQIISKVLLPEALPTIINSVTITL 164



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 21/211 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  I+   + IP+G+ +             ++  +     +  + P  V     
Sbjct: 26  TLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNQILGAVVNVGRSVPFLVLMVAI 85

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    +  +       + L +  G   ++   + +     P    E A S   T  + 
Sbjct: 86  IPLTKMLIGTFIGTTAAIVPLTI--GAIPFVARLIESALLEVPTGLVEAAQSMGATPTQI 143

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  +           + S ++     G +       G +  + T      
Sbjct: 144 ISKVLLPEALPTIINSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDVT------ 197

Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            ++   ++M   ++ + + +   L       
Sbjct: 198 -IMAVTVVMLIVLVQIIQSIGDSLVRRVDHR 227


>gi|82750170|ref|YP_415911.1| ABC transporter ATP-binding protein [Staphylococcus aureus RF122]
 gi|82655701|emb|CAI80100.1| probable ATP-binding ABC transporter [Staphylococcus aureus RF122]
          Length = 219

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   A I  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-ATIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTATIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|315446462|ref|YP_004079341.1| ABC-type proline/glycine betaine transporter, permease
           [Mycobacterium sp. Spyr1]
 gi|315264765|gb|ADU01507.1| ABC-type proline/glycine betaine transport system, permease
           component [Mycobacterium sp. Spyr1]
          Length = 224

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 73/199 (36%), Gaps = 12/199 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L           L  +V+ LL       L  ++  L  +      I+ +IP L       
Sbjct: 11  LWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTIPSLALF---- 66

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              + L     I  E   I A+    V  +  ++ ++L  +   + + + +       + 
Sbjct: 67  -VVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYRPLTRM 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P ++P L+ ++ +        V    M+ VG  VI + G+G++     +      
Sbjct: 126 LKVELPLALPVLIASLRV------VAVTNISMVAVGS-VIGIGGLGTWFTEGYQANKSDQ 178

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+  ++ +  +  + D L+
Sbjct: 179 IIAGIVAIFVLAIVIDTLI 197



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 8/192 (4%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L  I +   ++ I++  +I +P+G  +     +       A ++   P+   F +V+  +
Sbjct: 14  LTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTIPSLALF-VVLPLI 72

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               +     + + +   T   ++  V     A      + A++           + LP 
Sbjct: 73  IPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYRPLTRMLKVELPL 132

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  +           +   V  V   G       GLG +  E  +     +++ G++ 
Sbjct: 133 ALPVLIASLRVVAVTNISMVAVGSVIGIG-------GLGTWFTEGYQANKSDQIIAGIVA 185

Query: 562 MCCFVLALNRFL 573
           +    + ++  +
Sbjct: 186 IFVLAIVIDTLI 197


>gi|239504033|ref|ZP_04663343.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii AB900]
          Length = 219

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTVDTLLMVGASAFIAFLIGLPIAVILVNTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVILVNTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|229916294|ref|YP_002884940.1| phosphate ABC transporter inner membrane subunit PstC
           [Exiguobacterium sp. AT1b]
 gi|229467723|gb|ACQ69495.1| phosphate ABC transporter, inner membrane subunit PstC
           [Exiguobacterium sp. AT1b]
          Length = 314

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 15/284 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQY 64
           I+P  +    F ++   +     +G                   +  P++ D    +   
Sbjct: 31  IMPFLLFLSAFVSVVTTIGIAFTLGFELFKFFERVPVAEFLGSTEWYPLSADQRFGVWAL 90

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              T    + AM++++      A   ++  S R   VL PIL+++  +P + F    L+F
Sbjct: 91  VMGTLQITVIAMIVAVPLGLASAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALSF 150

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  L PG  I   L+    +    +  +      ++  +P+ + + +     +  +
Sbjct: 151 ITPILQALIPGLQIYNALSPGIVVGIMIIPMIASISEDAMSAVPKKIRDGALGLGATRLE 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIAL 231
               + +P +  G++ ++++ MS      +   +            +          + +
Sbjct: 211 VATKVVMPAATSGIIASIVLGMSRAIGETMIVTIAGGSQPNFEFNPLNAIQTMTAYIVQI 270

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           A  +     I Y  +  +G +     LL      W + +FR E 
Sbjct: 271 AKGDAGYGTIEYYSIYAVGALLFVFTLLMNLFANWVTRRFREEY 314



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 18/177 (10%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQ 419
           ++ +   Y       +     +   + + +IA I+ +P+G+                 ++
Sbjct: 70  FLGSTEWYPLSADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYASERARRVLK 129

Query: 420 PFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  ++LA  P  VF         P++ + +    +   L   +++       I       
Sbjct: 130 PILEVLAGVPTIVFGFFALSFITPILQALIPGLQIYNALSPGIVVGIMIIPMIASISEDA 189

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPG----IFPYYVTGAITACGGAWNASIVS 524
            SA P   ++ A     T       +++P     I    V G   A G     +I  
Sbjct: 190 MSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETMIVTIAG 246


>gi|218549543|ref|YP_002383334.1| ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218357084|emb|CAQ89717.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia fergusonii ATCC 35469]
          Length = 243

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +          +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFGALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  GI +       ++ +P  + +AA     P      + V  + +      + L L  +
Sbjct: 69  VGAGIAV--TRPWGAEFRPLVETIAAIGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 IL   +AG  A  +   EVA    ++  +  R + LP      + G  T+    
Sbjct: 127 L----PILQATLAGLGAIDDSVTEVAKGMGMSRGQRLRKVELPLAALVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    + ++R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIVDRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  I Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGVGAGIAVTRPWGAEFRPLVETIAAIGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPILQATLAGLGAIDDSVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAALVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIVDRLFERLVQALSQ 240


>gi|152965273|ref|YP_001361057.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151359790|gb|ABS02793.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 286

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 10/162 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     P A +L + P     P++        L       +++ F     +L N   G
Sbjct: 117 RPLEFVFMPLAMMLRSVPLVAMAPIIGMTFHAEWLRAATIGGVVVFF----PVLVNAAIG 172

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +      +V      + W   R + +P   P        +  GA   +++ E    G 
Sbjct: 173 LRSASPQALDVIRVNGGSRWTALRLVAVPTALPNLFAAIRISVPGAVIGAMLYEWLFSG- 231

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                 GLGA I  +  +  + ++   V+++    + L   +
Sbjct: 232 -----RGLGAEIFRANAQVQYSKLWSIVVVVTFASILLYTLV 268



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 14/241 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  +  + L+  +      G +   V R +V      +    +  + + T     +    
Sbjct: 42  VLVVAWYALLRVLAIDEFIGKRPVDVYRWLVTDEDAAVHRSDVGGWLATTLADSATGFAA 101

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++   V A+L    R L  V +P+  +++S+P++       + F   +        +  
Sbjct: 102 GVVGAVVVASLFTVLRPLEFVFMPLAMMLRSVPLVAMAPIIGMTFHAEWLRAATIGGVVV 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +          +    L +      +V R    S W     + VP ++P L   + +
Sbjct: 162 FFPVLV--------NAAIGLRSASPQALDVIRVNGGSRWTALRLVAVPTALPNLFAAIRI 213

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+ G     +  E +  G       G+G+ I  A  +     +   ++ +     L   L
Sbjct: 214 SVPGAVIGAMLYEWLFSG------RGLGAEIFRANAQVQYSKLWSIVVVVTFASILLYTL 267

Query: 259 L 259
           +
Sbjct: 268 V 268


>gi|331663624|ref|ZP_08364534.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA143]
 gi|331059423|gb|EGI31400.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli TA143]
          Length = 243

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALLFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIIV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++       +  +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIIVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|221639547|ref|YP_002525809.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221160328|gb|ACM01308.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 206

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPILGFLTFTVVY 122
            +  + V+   F        A S+R  ++  P+++          +S+P    L   ++ 
Sbjct: 1   MVAVSGVLGTAFGLPLGVFLATSQRGELLSAPLVNKVLGLVVNAARSVP-FIILVVAIIP 59

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F     G  IG   AAI  +  + +  +   +  ++  +   L E +R+   + +Q    
Sbjct: 60  FTRALAGTSIGTT-AAIVPLTVAAIPFIARLVENAIREVDSGLIEAARAMGATPFQIIRK 118

Query: 183 LGVPFSMPGLVWNMMMSM 200
           + +P ++PG+   + +++
Sbjct: 119 VLIPEALPGIALGLTLAL 136



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 47/151 (31%), Gaps = 12/151 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           V V  ++ +   +P+G+++           P ++  +        + P  +   + +   
Sbjct: 2   VAVSGVLGTAFGLPLGVFLATSQRGELLSAPLVNKVLGLVVNAARSVPFIILV-VAIIPF 60

Query: 442 SYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      ++  +  ++        +I   V        +   E A +   T ++  R ++
Sbjct: 61  TRALAGTSIGTTAAIVPLTVAAIPFIARLVENAIREVDSGLIEAARAMGATPFQIIRKVL 120

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +P   P    G   A       S +      
Sbjct: 121 IPEALPGIALGLTLALVSLIGYSAMVGAVGG 151


>gi|139439040|ref|ZP_01772492.1| Hypothetical protein COLAER_01498 [Collinsella aerofaciens ATCC
           25986]
 gi|133775387|gb|EBA39207.1| Hypothetical protein COLAER_01498 [Collinsella aerofaciens ATCC
           25986]
          Length = 302

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            + MV+S L     A  +A        +    +  P+++++  IP + F        V  
Sbjct: 83  FAVMVLSTLIALPIAIGSAIFAVEISPKFGSKIFQPLIELLTGIPSVVFGLIGFHVVVGL 142

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++        L     +    +  MT      L  +P    + S +   + WQ  W+
Sbjct: 143 MKSVFHVSTGLGILPGAIVLAVMILPTMTTLSVDGLRAVPDGYRQGSLALGYTRWQTIWH 202

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +  +MP L+  +++ M+  +   +A  M++ G
Sbjct: 203 VVLKSAMPSLMTAVILGMTRAFGETLAVRMVIGG 236



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 14/163 (8%)

Query: 391 VVLIIIASIIWIPVGI-----WIGFRPHI-SSKIQPFAQLLAAFPANVF--------FPL 436
             +++++++I +P+ I      +   P   S   QP  +LL   P+ VF          L
Sbjct: 83  FAVMVLSTLIALPIAIGSAIFAVEISPKFGSKIFQPLIELLTGIPSVVFGLIGFHVVVGL 142

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           + S          L  ++++       +    + G  A P+ +++ + +   T W+   +
Sbjct: 143 MKSVFHVSTGLGILPGAIVLAVMILPTMTTLSVDGLRAVPDGYRQGSLALGYTRWQTIWH 202

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           ++L    P  +T  I     A+  ++   +   G   + T+ L
Sbjct: 203 VVLKSAMPSLMTAVILGMTRAFGETLAVRMVIGGIEAMPTSLL 245


>gi|228474625|ref|ZP_04059356.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus hominis SK119]
 gi|228271288|gb|EEK12656.1| glycine betaine/carnitine/choline transport system permease
           proteinopuCD [Staphylococcus hominis SK119]
          Length = 225

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           TL+   L +   +  L  +  ++ + +       L A+  ++   ++ I +I+Q++P + 
Sbjct: 14  TLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +FA+F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLALGLG--------PSTVVFAVFLYALLPIIKNTYTGITEVDYNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TNNQVMRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTVFIL 187



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  Y++ L    +   +  ++ A II IP+GI I     I+  +   A ++   PA    
Sbjct: 16  NFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          +   +       I+ N   G +    + K+      +T  +  
Sbjct: 76  AILMLALGLGPST----VVFAVFLYALLPIIKNTYTGITEVDYNIKDAGKGMGMTNNQVM 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|254388596|ref|ZP_05003830.1| PstA protein [Streptomyces clavuligerus ATCC 27064]
 gi|294813996|ref|ZP_06772639.1| Putative phosphate ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326442401|ref|ZP_08217135.1| phosphate ABC transporter, permease protein PstA [Streptomyces
           clavuligerus ATCC 27064]
 gi|197702317|gb|EDY48129.1| PstA protein [Streptomyces clavuligerus ATCC 27064]
 gi|294326595|gb|EFG08238.1| Putative phosphate ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 358

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 101/290 (34%), Gaps = 21/290 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  S   F  +S  V          +     + + +C    V  +  + W  V  G+ +
Sbjct: 57  WGLVSALLFLLISYVVTSTVENRRQAKDRLATSIVWVCFILAVVPLFSLIWVTVSRGIKV 116

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------ 411
              +     +     ++    V      T+ +V     +A++I +P+G+           
Sbjct: 117 LDVYFLTHSMAGVPGFEAGGGVYHAIVGTLEQV----GLATVISVPIGLLTAVYLVEYGK 172

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIA 470
             ++  +  F  ++   P+ V    ++S +  + L P+  +  L +      ++  +   
Sbjct: 173 GALAKAVTFFVDVMTGIPSIVAGLFLLSIMLMFQLQPSGLMGALALAILMIPVVVRSTEE 232

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                PN+ +E + +  +  WR    +++P       TG + A       +    +  +G
Sbjct: 233 MLKLVPNELREASLALGVPKWRTILKVVIPTALGGITTGVMLAIARIAGETAPIMLLVFG 292

Query: 531 HIHLRT-------TGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALN 570
              + T       + L  YI E    G   S+       L++  FV+ LN
Sbjct: 293 SQLINTNPFEGAQSSLPFYIWEQYRVGSEASYDRAWAAALVLIAFVMLLN 342



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 100/268 (37%), Gaps = 29/268 (10%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---------ASRTTLRM 72
           ++    ++ ++ +        +    ++D+  +T  +  +P +            T  ++
Sbjct: 90  IVWVCFILAVVPLFSLIWVTVSRGIKVLDVYFLTHSMAGVPGFEAGGGVYHAIVGTLEQV 149

Query: 73  LSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPIL--GFLTFTVVYFMNLYP 128
             A VIS+    + A    +  +  L   +   +D+M  IP +  G    +++    L P
Sbjct: 150 GLATVISVPIGLLTAVYLVEYGKGALAKAVTFFVDVMTGIPSIVAGLFLLSIMLMFQLQP 209

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             ++GA   AI  I       +  S  + L  +P +L E S +  +  W+    + +P +
Sbjct: 210 SGLMGALALAILMIPV-----VVRSTEEMLKLVPNELREASLALGVPKWRTILKVVIPTA 264

Query: 189 MPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KEQDL 238
           + G+   +M++++            V  S++I           +  YI        E   
Sbjct: 265 LGGITTGVMLAIARIAGETAPIMLLVFGSQLINTNPFEGAQSSLPFYIWEQYRVGSEASY 324

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                A L ++  + L + L+ R +  W
Sbjct: 325 DRAWAAALVLIAFVMLLN-LVARGIARW 351


>gi|29831688|ref|NP_826322.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29608804|dbj|BAC72857.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 276

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 59/178 (33%), Gaps = 10/178 (5%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             ++  ++  LL           +  +    L    + +   +       +    L+   
Sbjct: 39  LTVLPTVLTALLLATWVWFQQARLDPLSENALSNGQVSKALWQHIQLTAISTFFVLIIAI 98

Query: 85  VYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
               L  +   R+   + + I ++ Q+ P +G L   V++            + AA+  I
Sbjct: 99  PLGILLTRRAFRKATPIAMTIANMGQATPAIGLLALLVIWLGTG--------QKAALIGI 150

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               +  +  +    L      + E +R   +S       + +P ++P ++  +  ++
Sbjct: 151 IIYAILPVLANTIAGLKANDPTVLEAARGIGMSSPGVLTRIELPLAVPLILAGVRTAL 208



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 60/184 (32%), Gaps = 17/184 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANVFFPLVVSCVSYYHL 446
            +      II IP+GI          K  P A  +A    A PA     L+V  +     
Sbjct: 87  AISTFFVLIIAIPLGIL--LTRRAFRKATPIAMTIANMGQATPAIGLLALLVIWLGTGQK 144

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + + +  I      +L N IAG  A      E A    ++       I LP   P  
Sbjct: 145 AALIGIIIYAIL----PVLANTIAGLKANDPTVLEAARGIGMSSPGVLTRIELPLAVPLI 200

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + ++     G + +        I         P +VLG ++     
Sbjct: 201 LAGVRTALVLNVGTATLATFGGGGGLGV-------LITTGITNQRMPVLVLGSILTVSLA 253

Query: 567 LALN 570
           L ++
Sbjct: 254 LLVD 257


>gi|82543552|ref|YP_407499.1| transport system permease protein [Shigella boydii Sb227]
 gi|81244963|gb|ABB65671.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|320184838|gb|EFW59628.1| Osmoprotectant ABC transporter inner membrane protein YehW
           [Shigella flexneri CDC 796-83]
 gi|332097495|gb|EGJ02475.1| inner membrane ABC transporter permease protein yehW [Shigella
           boydii 3594-74]
          Length = 243

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  +   II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFVVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + +  ++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFVVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|28901315|ref|NP_800970.1| phosphate ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153835865|ref|ZP_01988532.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ3810]
 gi|260362872|ref|ZP_05775741.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus K5030]
 gi|260880160|ref|ZP_05892515.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AN-5034]
 gi|260895277|ref|ZP_05903773.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus Peru-466]
 gi|260900628|ref|ZP_05909023.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ4037]
 gi|28809862|dbj|BAC62803.1| phosphate ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750619|gb|EDM61364.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ3810]
 gi|308085758|gb|EFO35453.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus Peru-466]
 gi|308092128|gb|EFO41823.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AN-5034]
 gi|308107043|gb|EFO44583.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ4037]
 gi|308112281|gb|EFO49821.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus K5030]
 gi|328469253|gb|EGF40199.1| phosphate ABC transporter, permease protein [Vibrio
           parahaemolyticus 10329]
          Length = 310

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      
Sbjct: 32  KERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVAT 90

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A V+S    ++       L A        +RL  V+ P ++++  IP + +    L 
Sbjct: 91  MIVASVVSTAGAVMVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLAGIPSVVYGFFGLV 150

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    +++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 151 IIVPLIQDIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKI 210

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 211 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 24/225 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV--------- 379
               ++   +R+ + L +    +       IA+  +   +  F    V  +         
Sbjct: 24  REKRRVDWKERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP 83

Query: 380 -IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV 432
            ++     +   VV    A ++ +PVG+             ++  I+P  +LLA  P+ V
Sbjct: 84  ALYGVATMIVASVVSTAGAVMVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLAGIPSVV 143

Query: 433 F--FPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVAS 484
           +  F LV+       +        +   ++++       +  V      A P  +KE + 
Sbjct: 144 YGFFGLVIIVPLIQDIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSL 203

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +   +       +++P      +TG I   G A   ++   +   
Sbjct: 204 ALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMG 248


>gi|329314064|gb|AEB88477.1| Phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 308

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TVIATIFAVPVGLSAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLSAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +        +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|326319196|ref|YP_004236868.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376032|gb|ADX48301.1| binding-protein-dependent transport systems inner membrane
           component [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 263

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 14/216 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  I   +   L       +   T   +L  +    L         A+S  L  VL 
Sbjct: 45  LPAPSAIAASLWQGLRTGYFVPHVRATLAALLLGLAGGGLAGLAIGIALAESPLLERVLR 104

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P + + Q +P L      V++F    P   +   L   F         +  + +  L   
Sbjct: 105 PYVVVSQVVPKLALAPLFVLWFGFGIPSTALITGLICFF--------PLMENTFTGLRQA 156

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
                ++ R    +  Q    L +P ++P ++  + M++       V  E +        
Sbjct: 157 DAQRLQLFRMLGATRAQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFLGASQ---- 212

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
             G+G+ +  A    D   +  A++ + G+  L  Q
Sbjct: 213 --GLGAVVIAAQGMMDTSLMFAALVLIAGIGLLLYQ 246



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 10/159 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P +   ++P+  +    P     PL V    +   +     +L+      + ++ N   
Sbjct: 96  SPLLERVLRPYVVVSQVVPKLALAPLFVLWFGFGIPS----TALITGLICFFPLMENTFT 151

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         ++      T  +    + LP   P  + G   A   A   ++V E     
Sbjct: 152 GLRQADAQRLQLFRMLGATRAQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFLG-- 209

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                + GLGA +  +        +   ++++    L L
Sbjct: 210 ----ASQGLGAVVIAAQGMMDTSLMFAALVLIAGIGLLL 244


>gi|227878527|ref|ZP_03996462.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|227861878|gb|EEJ69462.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
          Length = 302

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  + I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLFICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 66/198 (33%), Gaps = 19/198 (9%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP--VGIWIGF-------R 411
           +    ++            ++ G +     +V  +   ++ +   +   IG         
Sbjct: 50  YSVWEFLFTSDWAPLDKTGMFGGKVGAAIYIVGSLETCLLGLFICLPFAIGSAVFMTEIS 109

Query: 412 PHI-SSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P I     +P  ++  + P+ V+         P++ +         ++  + +++    +
Sbjct: 110 PKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVPIIRNAFHPKMGGFSVLAASIVLAIMIF 169

Query: 463 YILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +  V A    + PN ++E A     T W+    ++LP      +TG +     A   +
Sbjct: 170 PTITTVAADAIKSVPNSYREGAYGLGATRWQVIGKVVLPAASGGILTGVVLGLARAIGEA 229

Query: 522 IVSEVASWGHIHLRTTGL 539
           +   +         T+ L
Sbjct: 230 LAVAMVIGKTRSFATSLL 247


>gi|218441883|ref|YP_002380212.1| molybdate ABC transporter inner membrane protein [Cyanothece sp.
           PCC 7424]
 gi|218174611|gb|ACK73344.1| molybdate ABC transporter, inner membrane subunit [Cyanothece sp.
           PCC 7424]
          Length = 615

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 44/229 (19%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGM-----VLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           L A  ++ +FTF     AA+            +  I      I  L  L  TVV F+ L 
Sbjct: 11  LRAAGLATIFTFFVGIAAARWMLTYRGQGKGFIDAIF-----IAPLV-LPPTVVGFLLLL 64

Query: 128 PG----------------KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
                              +I +  A +          M  +   +   I   +   +R+
Sbjct: 65  LLGRNSPIGQILQESLNFNIIFSWEATVITATVVAFPLMYRTSLGAFEQIDASVFLAART 124

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPLPGIGSYI 229
              S W+ FW + +P S  GLV   ++S +       A+ M+          +P     I
Sbjct: 125 LGASEWRIFWQVMLPLSYRGLVAATILSFARALGEFGATLMLAGNIPGQTQTMP---VAI 181

Query: 230 ALAIKEQDL-LAILYAMLTMLG---VIFLYDQLLFRPMIVWSNKFRLER 274
             A +  D+  A+++ ++ M     VI + +         W+   R+++
Sbjct: 182 FFAAESGDMTTALIWVLILMGISMSVIVIVNF--------WAESKRVQQ 222



 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ--WYILFNVIAGA-SAFPNDFKEVASSFHITGW 491
           P+        + N        +I  T   + +++    GA           A +   + W
Sbjct: 71  PIGQILQESLNFNIIFSWEATVITATVVAFPLMYRTSLGAFEQIDASVFLAARTLGASEW 130

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           R +  ++LP  +   V   I +   A      + + + G+I  +T  +   I  + E G 
Sbjct: 131 RIFWQVMLPLSYRGLVAATILSFARALGEFGATLMLA-GNIPGQTQTMPVAIFFAAESGD 189

Query: 552 FPEVVLGVLI-----MCCFVLA 568
               ++ VLI     M   V+ 
Sbjct: 190 MTTALIWVLILMGISMSVIVIV 211


>gi|329666980|gb|AEB92928.1| Phosphate ABC transporter, permease protein [Lactobacillus
           johnsonii DPC 6026]
          Length = 296

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L           +            +      +   ++  ++ISL  
Sbjct: 20  IVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A   K      ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ Q++  +P+   +   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFN--LPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           VS ++ I +  +   +  G+   S  ++ +   +YQ    V      +++ +V+ +II+ 
Sbjct: 18  VSIVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISL 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I +  GI++         ++ I+   ++L++ P+ V   F  ++  V +      +  +
Sbjct: 78  PIALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGA 137

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L + F     +  N+       P   ++   +  ++ W+  R I+LP   P  +TG I +
Sbjct: 138 LALTFFNLPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 AGRIFG 203


>gi|301059408|ref|ZP_07200330.1| phosphate ABC transporter, permease protein PstA [delta
           proteobacterium NaphS2]
 gi|300446489|gb|EFK10332.1| phosphate ABC transporter, permease protein PstA [delta
           proteobacterium NaphS2]
          Length = 292

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 68/181 (37%), Gaps = 5/181 (2%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
             ++ ++  L+           +      ++    +      T    + A+V++L     
Sbjct: 34  AALLVVVYFLVARGWRAINWTFLTQPPVDSMTKGGILPCIVGTLCLSVGAIVVALPIGVA 93

Query: 86  YATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            A      A+  R+  ++   ++ +  +P + F  F + +F+      V  + LA    +
Sbjct: 94  SAIYLNEYARPGRIVRIIRLGINNLAGVPSVVFGLFGLAFFVVYLDMGV--SILAGSLTL 151

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  S  ++L  +P    E S     + WQ    + +P ++PG++   ++ +S 
Sbjct: 152 GAMTLPVIIGSTEEALRGVPDTYREASLGLGATKWQTIRSVVLPAALPGILTGTILGLSR 211

Query: 203 G 203
            
Sbjct: 212 A 212



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R++ +++     VV    +   W++I +        D +    +    +   + L + A 
Sbjct: 26  RIAAVINGAALLVVVYFLVARGWRAINWTFLTQPPVDSMTKGGI-LPCIVGTLCLSVGAI 84

Query: 399 IIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPN 449
           ++ +P+G+              I   I+     LA  P+ VF  F L    V        
Sbjct: 85  VVALPIGVASAIYLNEYARPGRIVRIIRLGINNLAGVPSVVFGLFGLAFFVVYLDMGVSI 144

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L  SL +   T   I+ +        P+ ++E +     T W+  R ++LP   P  +TG
Sbjct: 145 LAGSLTLGAMTLPVIIGSTEEALRGVPDTYREASLGLGATKWQTIRSVVLPAALPGILTG 204

Query: 510 AITACGGA 517
            I     A
Sbjct: 205 TILGLSRA 212


>gi|148655952|ref|YP_001276157.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
 gi|148568062|gb|ABQ90207.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus sp. RS-1]
          Length = 217

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
            A+ IS +        AA   R+G   +     ++ +P L  L     Y           
Sbjct: 32  VALAISTVAGLPIGIWAAHQVRIGQWAINAFGALRLVPSLAILFLMQPYLGIG------- 84

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             L A+ A+    +  +  + Y  +  +   + + +R   ++  Q  W + +P ++P +V
Sbjct: 85  -ALPALVALTLLAIPPILIATYAGIRAVDGGVRDAARGMGMTAAQILWRVELPLALPSIV 143

Query: 194 WNMMMS 199
             +  +
Sbjct: 144 GGVRTA 149



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   V + I+++  +P+GIW   +  I          L   P+     L+   +    L
Sbjct: 27  LWISSVALAISTVAGLPIGIWAAHQVRIGQWAINAFGALRLVPSLAILFLMQPYLGIGAL 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+LL I      IL    AG  A     ++ A    +T  +    + LP   P  
Sbjct: 87  PALVALTLLAI----PPILIATYAGIRAVDGGVRDAARGMGMTAAQILWRVELPLALPSI 142

Query: 507 VTGAITAC 514
           V G  TA 
Sbjct: 143 VGGVRTAA 150


>gi|225022211|ref|ZP_03711403.1| hypothetical protein CORMATOL_02245 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945144|gb|EEG26353.1| hypothetical protein CORMATOL_02245 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 213

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 15/196 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +   + +    ++  ++++ +   V A L+ +  RL  +   +  +  +IP    + 
Sbjct: 9   WTHILADSWQHLSLVVQCLILATIIAVVCAALSYQHPRLAALANNVSTVGLTIPSFALVG 68

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++ F         G   A I   F + +  +  +    L  +  ++   +R   +S  
Sbjct: 69  ILIIPFG-------FGVLPAVIVVTFFATL-PILRNAVVGLSEVDSNIVSAARGIGMSRL 120

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
             F+ + +P + P ++  M +S +     + A     +G      PG+G YI   +    
Sbjct: 121 DTFFRVELPLAWPVILAGMRVS-AQMTMGIAAVAAYALG------PGLGGYIFSGLSRLG 173

Query: 238 LLAILYAMLTMLGVIF 253
                 ++ T +  + 
Sbjct: 174 GANSFESVATGVIAVV 189



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 62/176 (35%), Gaps = 11/176 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           +  F  +   +++      +  VV  +I+A+II +         P +++     + +   
Sbjct: 1   MREFITERWTHILADSWQHLSLVVQCLILATIIAVVCAALSYQHPRLAALANNVSTVGLT 60

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P+     +++    +  L   + ++          IL N + G S   ++    A    
Sbjct: 61  IPSFALVGILIIPFGFGVLPAVIVVTFFATL----PILRNAVVGLSEVDSNIVSAARGIG 116

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
           ++    +  + LP  +P  + G   +       + V+  A          GLG YI
Sbjct: 117 MSRLDTFFRVELPLAWPVILAGMRVSAQMTMGIAAVAAYALG-------PGLGGYI 165


>gi|54308586|ref|YP_129606.1| putative phosphate ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46913015|emb|CAG19804.1| putative phosphate ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 319

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 84/216 (38%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS-------R 67
            F N+F L A + ++ +I I     +E         +  I L    LP            
Sbjct: 44  FFKNLFMLSAAIGILSLITIGYFIFREGYAAFAHAGVTNIVLGSDWLPPALFGIAPMIVA 103

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + +    A+++ +    + A   A+   +RL  ++ P+++++  IP + +    L   V 
Sbjct: 104 SLVSTAGAVILGVPVGVLTAIFIAEVAPKRLANIIRPLIELLAGIPSVVYGFFGLVIIVP 163

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++        LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 164 LIQSVFNVPAGNTVLAGIIVLAVMILPTVITVSETSIRAVPRVYKEGSLALGASHMFTIF 223

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L +P +  G++  +++ ++      +A  M++   
Sbjct: 224 KLLLPAARSGIMTGVILGIARALGETMAIIMVMGNS 259



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 81/265 (30%), Gaps = 14/265 (5%)

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
           FR ++ +    Y      + +   VK        +       F  L        +L +  
Sbjct: 3   FRNSDVVGIWSYDIMTIANSIEKTVKASSLKSKKVIDWRELFFKNLFMLSAAIGILSLIT 62

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
                      A+   G          +   ++     +   +V    A I+ +PVG+  
Sbjct: 63  IGYFIFREGYAAFAHAGVTNIVLGSDWLPPALFGIAPMIVASLVSTAGAVILGVPVGVLT 122

Query: 409 GFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSL 454
                      +++ I+P  +LLA  P+ V+         PL+ S  +    N  L   +
Sbjct: 123 AIFIAEVAPKRLANIIRPLIELLAGIPSVVYGFFGLVIIVPLIQSVFNVPAGNTVLAGII 182

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           ++       ++        A P  +KE + +   +       ++LP      +TG I   
Sbjct: 183 VLAVMILPTVITVSETSIRAVPRVYKEGSLALGASHMFTIFKLLLPAARSGIMTGVILGI 242

Query: 515 GGAWNASIVSEVASWGHIHLRTTGL 539
             A   ++   +       +    L
Sbjct: 243 ARALGETMAIIMVMGNSPAMPEGLL 267


>gi|314935639|ref|ZP_07842991.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|313656204|gb|EFS19944.1| glycine betaine/L-proline ABC transporter, permease protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 225

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 73/189 (38%), Gaps = 15/189 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114
           TL+   L +   +  L  +  ++ + +       L A+  ++   ++ I +I+Q++P + 
Sbjct: 14  TLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIA 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   ++                 +FA+F   +  +  + Y  +  +  ++++  +   +
Sbjct: 74  MLAILMLALGLG--------PSTVVFAVFLYALLPIIKNTYTGITEVDYNIKDAGKGMGM 125

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           +  Q    + +P S+  ++  + ++       +V +  IV   + I  P +G  I     
Sbjct: 126 TNNQVMRMIELPLSLSVIIGGIRIA-------LVVAIGIVAIGSFIGAPTLGDIIIRGTN 178

Query: 235 EQDLLAILY 243
             D    + 
Sbjct: 179 STDGTVFIL 187



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 4/154 (2%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  Y++ L    +   +  ++ A II IP+GI I     I+  +   A ++   PA    
Sbjct: 16  NFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIAML 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +++  +          +   +       I+ N   G +    + K+      +T  +  
Sbjct: 76  AILMLALGLGPST----VVFAVFLYALLPIIKNTYTGITEVDYNIKDAGKGMGMTNNQVM 131

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           R I LP      + G   A   A     +     
Sbjct: 132 RMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIG 165


>gi|306833541|ref|ZP_07466668.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424311|gb|EFM27450.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 295

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +          AK  R    +   ++I+ S+P +    F  + F+
Sbjct: 65  SLFLLVITLIISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++   L N+     E   +  LS W+   ++ 
Sbjct: 125 VQFQYGFSIISGALALTVFN--LPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           VP ++P +V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 VPEALPSIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 62/156 (39%), Gaps = 5/156 (3%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLL 425
              +YQ    +      ++F +V+ +II+  + +  GI++                 ++L
Sbjct: 48  KSSSYQAGGGIGIQLYNSLFLLVITLIISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEIL 107

Query: 426 AAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++ P+ V   F  ++  V + +    +  +L +       +  NV  G     +  +E  
Sbjct: 108 SSLPSVVVGLFGYLIFVVQFQYGFSIISGALALTVFNLPQMTRNVEDGLRNVHHTQREAG 167

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            +  ++ W    ++++P   P  VTG + A G  + 
Sbjct: 168 LALGLSRWETVVHVVVPEALPSIVTGIVLASGRIFG 203


>gi|326391592|ref|ZP_08213122.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325992374|gb|EGD50836.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 295

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 69/183 (37%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   + ++ +I+ +L+  +       +            +      +   ++  ++IS+ 
Sbjct: 19  VFLILFLVSLISYILYQGRTKLNIDFLTSPPKFMEAGGGIGPQLFNSLELLIITLIISVP 78

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A   K   L  ++   ++ + S+P +    F ++ F+ +          A 
Sbjct: 79  IGLGAGIYMAEYAKPGLLTELIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLIAGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  MT     S+ ++P  L E S +   + WQ    + VP +MPG++  +++
Sbjct: 139 ALTVLNLPV--MTRVSEDSIRSVPNSLREASYALGSTKWQTIVKVVVPAAMPGIITGIIL 196

Query: 199 SMS 201
           +  
Sbjct: 197 TAG 199



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 11/188 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
            + +F    +  +   I +Q    +   F      ++   G I   +F  + L+II  II
Sbjct: 16  AVAVFLILFLVSLISYILYQGRTKLNIDFLTSPPKFMEAGGGIGPQLFNSLELLIITLII 75

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIF 458
            +P+G+  G      +K     +L+  +       P +VV                 +I 
Sbjct: 76  SVPIGLGAGIYMAEYAKPGLLTELIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLIA 135

Query: 459 GTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           G     + N+            + PN  +E + +   T W+    +++P   P  +TG I
Sbjct: 136 GALALTVLNLPVMTRVSEDSIRSVPNSLREASYALGSTKWQTIVKVVVPAAMPGIITGII 195

Query: 512 TACGGAWN 519
              G  + 
Sbjct: 196 LTAGRIFG 203


>gi|312958343|ref|ZP_07772864.1| D-methionine ABC transporter [Pseudomonas fluorescens WH6]
 gi|311287407|gb|EFQ65967.1| D-methionine ABC transporter [Pseudomonas fluorescens WH6]
          Length = 214

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L Q A  T L +  + +I+LL     A     S          L  VL   +++ +SIP 
Sbjct: 6   LVQGAIDTLLMVGVSSLIALLVGIALAVFLVTSDKGGIYQAPALNRVLGAFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  L  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRLIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P ++PG+V    +++
Sbjct: 124 GCRRWHIIWHVLLPEALPGIVGGFTITL 151



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 48/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V V  +IA ++ I + +++           P ++  +  F  L  + P  +    L
Sbjct: 13  TLLMVGVSSLIALLVGIALAVFLVTSDKGGIYQAPALNRVLGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 133 HVLLPEALPGIVGGFTITLVTMINSS 158


>gi|282866351|ref|ZP_06275396.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282558747|gb|EFB64304.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 224

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 9/154 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PV +++G      +     + +  A P      L +  V+    +  L   + ++     
Sbjct: 47  PVALYLGHIGKGGALAVNLSNVGRAVPVFAV--LALFMVTPLRNSGYLPTVIALVLFAVP 104

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +L N   G         E A    ++G + +  + LP  +P  +TG  +A       + 
Sbjct: 105 PLLTNAYVGMRQVDRSVIEAARGMGMSGGQLFLRVELPLAYPMIMTGLRSAAVQVVATAS 164

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           ++ +   G       GLG  I          +V 
Sbjct: 165 IAAMVGLG-------GLGRIITAGFNTYDTAQVF 191



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 13/158 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A       + G + V + ++ +++P+   L   +V              L  + A+  
Sbjct: 47  PVALYLGHIGKGGALAVNLSNVGRAVPVFAVLALFMV------TPLRNSGYLPTVIALVL 100

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V  +  + Y  +  + R + E +R   +SG Q F  + +P + P ++  +        
Sbjct: 101 FAVPPLLTNAYVGMRQVDRSVIEAARGMGMSGGQLFLRVELPLAYPMIMTGLR----SAA 156

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
             VVA+  I     ++ L G+G  I       D   + 
Sbjct: 157 VQVVATASIAA---MVGLGGLGRIITAGFNTYDTAQVF 191


>gi|327475160|gb|AEA77175.1| PstC [Exiguobacterium sp. EPVM]
          Length = 314

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 98/284 (34%), Gaps = 15/284 (5%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQY 64
           I+P  +    F ++   +     +G                   +  P++ D    +   
Sbjct: 31  IMPFLLFLSAFVSVVTTVGIAFTLGFELFKFFERVPVAEFLGSTEWYPLSADQRFGVWAL 90

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTF 118
              T    + AM++++      A   ++  S R   +L PIL+++  +P + F    L+F
Sbjct: 91  VMGTLQITVIAMIVAVPLGLASAIYLSEYASERARTILKPILEVLAGVPTIVFGFFALSF 150

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  L PG  I   L+    +    +  +      S+  +P+ + + +     +  +
Sbjct: 151 VTPILQALIPGLQIYNALSPGIVVGIMIIPMIASISEDSMSAVPKKIRDGALGLGATRLE 210

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIAL 231
               + +P ++ G++ ++++ MS      +   +            +          + +
Sbjct: 211 VATKVVMPAALSGIIASIVLGMSRAIGETMIVTIAGGSQPNFEFNPLNAIQTMTAYIVQI 270

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           A  +     I Y  +  +G +     L+      W + +FR E 
Sbjct: 271 AKGDAGYGTIEYYSIYAVGALLFVFTLVMNLFANWVTRRFREEY 314



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 14/166 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQ 419
           ++ +   Y       +     +   + + +IA I+ +P+G+               + ++
Sbjct: 70  FLGSTEWYPLSADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYASERARTILK 129

Query: 420 PFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  ++LA  P  VF         P++ + +    +   L   +++       I       
Sbjct: 130 PILEVLAGVPTIVFGFFALSFVTPILQALIPGLQIYNALSPGIVVGIMIIPMIASISEDS 189

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            SA P   ++ A     T       +++P      +   +     A
Sbjct: 190 MSAVPKKIRDGALGLGATRLEVATKVVMPAALSGIIASIVLGMSRA 235


>gi|307244129|ref|ZP_07526247.1| putative spermidine/putrescine ABC transporter, permease protein
           PotB [Peptostreptococcus stomatis DSM 17678]
 gi|306492500|gb|EFM64535.1| putative spermidine/putrescine ABC transporter, permease protein
           PotB [Peptostreptococcus stomatis DSM 17678]
          Length = 288

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 75/205 (36%), Gaps = 22/205 (10%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-------VLVPILDIMQSIPILGFLTF 118
           +R+ +    A  + ++  +  A + +K++           +L   ++ +  +    ++  
Sbjct: 72  TRSFVLAGIATFLCVIIGYPVAYIISKAKISRRDSLILLFILPMWMNFL--LRTYAWIAI 129

Query: 119 --------TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
                   +++ F  L P  ++    A +  +  + +  M   +Y SL  +  DL   +R
Sbjct: 130 LGKNGLLNSLLGFFGLTPNSILYTSAAVLLGMIYNFLPYMVLPIYTSLQKLDEDLVNAAR 189

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI- 229
               +    F  +  P S+PG++  + M           S ++  G T++    +G  I 
Sbjct: 190 DLGANTVTVFRKVIFPLSIPGVMSGVTMVFMPCVTTFAISRLLGGGKTML----VGDLIE 245

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFL 254
                  D        + M+ +I +
Sbjct: 246 QQFTTVGDWNLGSSISMVMMVIILI 270



 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 6/140 (4%)

Query: 436 LVVSCVSYYHLNPN--LWLSLLMIFGTQW----YILFNVIAGASAFPNDFKEVASSFHIT 489
           L+ S + ++ L PN  L+ S  ++ G  +    Y++  +         D    A      
Sbjct: 135 LLNSLLGFFGLTPNSILYTSAAVLLGMIYNFLPYMVLPIYTSLQKLDEDLVNAARDLGAN 194

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
               +R +I P   P  ++G             +S +   G   L    +        + 
Sbjct: 195 TVTVFRKVIFPLSIPGVMSGVTMVFMPCVTTFAISRLLGGGKTMLVGDLIEQQFTTVGDW 254

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
                + + ++++    +A 
Sbjct: 255 NLGSSISMVMMVIILISMAF 274


>gi|259417934|ref|ZP_05741853.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259346840|gb|EEW58654.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 568

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 81/569 (14%), Positives = 170/569 (29%), Gaps = 58/569 (10%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM-----LSAM 76
           LL+ +L + ++  L    +           + +      L + A+ + LR          
Sbjct: 17  LLSLILAVAVLITLAPVARLFFEGITAGGDLNLGFFTEVLAKPATLSALRHSLITAGLGT 76

Query: 77  VISLLFTFVYATLAAKSRRLGM------VLVPILDIMQSIPILGF---LTFTVVYFMNLY 127
           VIS+L    +A L A +           +++P++ I   I  L +   +  + V+   L 
Sbjct: 77  VISVLIGGTFAFLVALTDLRRKGALVFCLMIPMM-IPPQITALSWTQIMGPSSVFLKTLG 135

Query: 128 PGKVIGAEL------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               +GA          I  +       +  ++   L  IP+++ E +R    SG + + 
Sbjct: 136 LAPPLGAPQPLYSAGGIILLLGIQHTSIIFLTLRAGLRAIPQEVVEAARISGASGLRIWG 195

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++P L+  + ++            M+ +      LP +       +    L  +
Sbjct: 196 QIVLPLTLPSLLAGIAITFVTALGNFGIPAMLGIPAGYATLPTLIYQRLAGMGTTVLAEV 255

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
             A+L +L  +     +L +    +  + R+          S  L   R    +      
Sbjct: 256 --AVLAILIGVVAICGILLQRF--FQQRQRVHLVGSTGRPLSIPLGRARLPVEVVLWAVI 311

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
           +     P++  +         +   F    L           +    F     +++  A 
Sbjct: 312 AAILVLPMAGLLATSLVPAYGVPLRFDTISLDGWHEALFRQPVTRRAFLNSFVLSVSAAA 371

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
             +   +      D               +   +   ++ I + +               
Sbjct: 372 LLMALCLPLAWLMDRHKTPLGRVFDSLLDLPYALPGVVLAIAMILL-------------- 417

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFK 480
                         L+    +   L   +W+  L      + ++F  V +          
Sbjct: 418 --------------LINLPFTELTLYGTIWIIFLAYLARFFAVMFRPVQSSLRQLDPAMD 463

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A S   +  R  + IILP   P    GAI     A+N   VS +            LG
Sbjct: 464 EAAQSVGASLSRRLKDIILPLSAPSAAAGAILVFLTAFNELTVSALLWSSGTET----LG 519

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    + G         + +   V+ L
Sbjct: 520 VVIFNLDDSGETVMASAVAMTIVFVVMFL 548



 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 2/120 (1%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   + AG  A P +  E A     +G R W  I+LP   P  + G       A     +
Sbjct: 164 IFLTLRAGLRAIPQEVVEAARISGASGLRIWGQIVLPLTLPSLLAGIAITFVTALGNFGI 223

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +      +     L          G+     + VL +   V+A+   L    +    R
Sbjct: 224 PAMLGIPAGYATLPTLIY--QRLAGMGTTVLAEVAVLAILIGVVAICGILLQRFFQQRQR 281


>gi|253732023|ref|ZP_04866188.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733364|ref|ZP_04867529.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|297207958|ref|ZP_06924389.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297591137|ref|ZP_06949775.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300912042|ref|ZP_07129485.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381036|ref|ZP_07363690.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|253724264|gb|EES92993.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728632|gb|EES97361.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|296887201|gb|EFH26103.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297576023|gb|EFH94739.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300886288|gb|EFK81490.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304340345|gb|EFM06285.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312438211|gb|ADQ77282.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|320140281|gb|EFW32139.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320143947|gb|EFW35719.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus MRSA177]
          Length = 328

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 112 TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 171

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 172 FIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 231

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 232 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 291

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 292 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 328



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 91  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 147

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +        +   L++       I        ++ 
Sbjct: 148 ILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 207

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 208 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 267

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 268 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 325


>gi|145223695|ref|YP_001134373.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315444022|ref|YP_004076901.1| ABC-type proline/glycine betaine transporter, permease
           [Mycobacterium sp. Spyr1]
 gi|145216181|gb|ABP45585.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315262325|gb|ADT99066.1| ABC-type proline/glycine betaine transport system, permease
           component [Mycobacterium sp. Spyr1]
          Length = 215

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 63/184 (34%), Gaps = 19/184 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           ++     L   + +    ++ +++++ +       L  ++     +      ++ ++P  
Sbjct: 8   VSTHYQQLAFDSYQHVSAVVQSVLLATVIGVAIGVLTYRNSLAANLATATSSVILTVPSF 67

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   +  F            + ++ A+    +  +  +    L  +   L + +R   
Sbjct: 68  ALLGLLIPLFGLGV--------IPSVAALVLYSLLPIIRNTIVGLNAVDPALTDAARGIG 119

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS--MSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           LS  Q    + +    P ++  M +S  MS G   + A          +  PG+G+ I  
Sbjct: 120 LSRLQTLGRVELRLVWPAILSAMRLSTQMSMGVLAIAA---------YVKGPGLGNLIFA 170

Query: 232 AIKE 235
            +  
Sbjct: 171 GLAR 174



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 54/154 (35%), Gaps = 11/154 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV  +++A++I + +G+        ++     + ++   P+     L++           
Sbjct: 26  VVQSVLLATVIGVAIGVLTYRNSLAANLATATSSVILTVPSFALLGLLIPLFGLG----V 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +     ++  +   I+ N I G +A      + A    ++  +    + L  ++P  ++ 
Sbjct: 82  IPSVAALVLYSLLPIIRNTIVGLNAVDPALTDAARGIGLSRLQTLGRVELRLVWPAILSA 141

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              +   +     ++             GLG  I
Sbjct: 142 MRLSTQMSMGVLAIAAYVKG-------PGLGNLI 168


>gi|87120189|ref|ZP_01076084.1| Putative ABC transporter permease [Marinomonas sp. MED121]
 gi|86164292|gb|EAQ65562.1| Putative ABC transporter permease [Marinomonas sp. MED121]
          Length = 248

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 10/134 (7%)

Query: 71  RMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +L + VI++        + ++ R  ++    + +L+I  +IP L  L   + +      
Sbjct: 56  MVLISGVIAIALAIPIGIILSRPRFAKVAESAMQLLNIGTTIPTLAILALAMSFLGIG-- 113

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  L AIF +  + +  +  + Y  L  +P  L+E +    ++  Q    + +P +
Sbjct: 114 ------TLPAIFGLCIASLLPIVRNTYIGLNEVPAHLKEAAAGIGMTAGQMLIKVEIPNA 167

Query: 189 MPGLVWNMMMSMSG 202
           +  +   +  +++ 
Sbjct: 168 LFVIFAGIRTALAI 181



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
           ++  + +++S+    ++F ++    +G  +++    +    ++    V++L    +  V+
Sbjct: 1   MKQAAMKQLSFKRYGYFFGILIAFWLGSVFEANA--IFEELWEYQEDVVYLIGQHIEMVL 58

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNP 448
           +  +IA  + IP+GI +  RP  +   +   QLL      P      L +S +    L  
Sbjct: 59  ISGVIAIALAIPIGIIL-SRPRFAKVAESAMQLLNIGTTIPTLAILALAMSFLGIGTL-- 115

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                  +   +   I+ N   G +  P   KE A+   +T  +    + +P        
Sbjct: 116 --PAIFGLCIASLLPIVRNTYIGLNEVPAHLKEAAAGIGMTAGQMLIKVEIPNALFVIFA 173

Query: 509 GAITACGG 516
           G  TA   
Sbjct: 174 GIRTALAI 181


>gi|307267069|ref|ZP_07548582.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917900|gb|EFN48161.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 295

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 69/183 (37%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   + ++ +I+ +L+  +       +            +      +   ++  ++IS+ 
Sbjct: 19  VFLILFLVSLISYILYQGRTKLNIDFLTSPPKFMEAGGGIGPQLFNSLELLIITLIISVP 78

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    A   K   L  ++   ++ + S+P +    F ++ F+ +          A 
Sbjct: 79  IGLGAGIYMAEYAKPGLLTELIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLIAGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  MT     S+ ++P  L E S +   + WQ    + VP +MPG++  +++
Sbjct: 139 ALTVLNLPV--MTRVSEDSIRSVPNSLREASYALGSTKWQTIVKVVVPAAMPGIITGIIL 196

Query: 199 SMS 201
           +  
Sbjct: 197 TAG 199



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 11/188 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
            + +F    +  +   I +Q    +   F      ++   G I   +F  + L+II  II
Sbjct: 16  AVAVFLILFLVSLISYILYQGRTKLNIDFLTSPPKFMEAGGGIGPQLFNSLELLIITLII 75

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIF 458
            +P+G+  G      +K     +L+  +       P +VV                 +I 
Sbjct: 76  SVPIGLGAGIYMAEYAKPGLLTELIRLSVETLSSMPSIVVGLFGLLVFVTMTGWGYSLIA 135

Query: 459 GTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           G     + N+            + PN  +E + +   T W+    +++P   P  +TG I
Sbjct: 136 GALALTVLNLPVMTRVSEDSIRSVPNSLREASYALGSTKWQTIVKVVVPAAMPGIITGII 195

Query: 512 TACGGAWN 519
              G  + 
Sbjct: 196 LTAGRIFG 203


>gi|196229503|ref|ZP_03128368.1| phosphate ABC transporter, inner membrane subunit PstC
           [Chthoniobacter flavus Ellin428]
 gi|196226735|gb|EDY21240.1| phosphate ABC transporter, inner membrane subunit PstC
           [Chthoniobacter flavus Ellin428]
          Length = 538

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 41/207 (19%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPF 421
           +    +QD   ++ L   ++     + IIA  I +P+GI           P     ++P+
Sbjct: 283 LTASFWQDWYGIVPLFVGSLL----VSIIALAIAVPLGISAAIYVSEIAGPREKGIVKPY 338

Query: 422 AQLLAAFP-----------------------ANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            + ++A P                       A  +FP          L     L+L+ I 
Sbjct: 339 IEFISAIPSVVLGFFGIAVLGTALRWLSQTPALSWFPGFPMSERLNALTAGCLLALISI- 397

Query: 459 GTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +F++     +  P  FKE + +     ++    +++P      ++  +   G  
Sbjct: 398 ----PTIFSLAEDALNNVPKHFKEASYALGANRFQTIVRVLVPASLSGIISAVLLGFGRV 453

Query: 518 WNASIVSEVASWGHIHLR--TTGLGAY 542
              +++  + +   I +   T GLGA+
Sbjct: 454 IGETMIVLLCAGNRIAIPDFTQGLGAF 480



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 43/225 (19%)

Query: 73  LSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVV--- 121
           L   +I+L         AA         R   ++ P ++ + +IP  +LGF    V+   
Sbjct: 302 LLVSIIALAIAVPLGISAAIYVSEIAGPREKGIVKPYIEFISAIPSVVLGFFGIAVLGTA 361

Query: 122 -----------YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
                      +F   +P       L A   +    +  +      +L N+P+  +E S 
Sbjct: 362 LRWLSQTPALSWF-PGFPMSERLNALTAGCLLALISIPTIFSLAEDALNNVPKHFKEASY 420

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLP----G 224
           +   + +Q    + VP S+ G++  +++        V+   MIV+      I +P    G
Sbjct: 421 ALGANRFQTIVRVLVPASLSGIISAVLLGFG----RVIGETMIVLLCAGNRIAIPDFTQG 476

Query: 225 IGSY----------IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +G++          IA  + E     I Y  L M+GV+     L+
Sbjct: 477 LGAFFQPVHTMTGIIAQEMGEVVKGGIHYRALFMVGVVLFTLSLV 521


>gi|163744369|ref|ZP_02151729.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381187|gb|EDQ05596.1| putative choline uptake ABC transporter permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 244

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I ++ Q+ P +  L   V          ++   L  +  IF + V          L N+P
Sbjct: 90  ITNMGQTFPPVAVLALAVPALGFGAGPTLVALFLYGLLPIFENAVT--------GLTNLP 141

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E +R   LS WQ+ W + +P ++P  +  + +S       VV +       + +  
Sbjct: 142 PATMEAARGIGLSRWQRLWRVELPLALPITLTGIRLS-------VVIALGTATIGSTVAA 194

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +G  I   +   +   ++   L +     L    +
Sbjct: 195 RTLGEVIIAGLLTNNTAFVVQGGLAVGLFAVLIYDAM 231



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 11/143 (7%)

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            FP      L V  + +      + L L  +      I  N + G +  P    E A   
Sbjct: 96  TFPPVAVLALAVPALGFGAGPTLVALFLYGLL----PIFENAVTGLTNLPPATMEAARGI 151

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++ W+    + LP   P  +TG   +   A   + +          +    LG  I   
Sbjct: 152 GLSRWQRLWRVELPLALPITLTGIRLSVVIALGTATIG-------STVAARTLGEVIIAG 204

Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569
               +   VV G L +  F + +
Sbjct: 205 LLTNNTAFVVQGGLAVGLFAVLI 227


>gi|323357091|ref|YP_004223487.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Microbacterium testaceum StLB037]
 gi|323273462|dbj|BAJ73607.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 276

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++ +  +T+    + +++         + +     + S   P A LL   P     P++ 
Sbjct: 67  LVPMIGVTLGHSAIGLLLGITAGFIGAVALTVSRALRSIFLPLALLLQTVPLIAMAPVIY 126

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           +      L   +  +++    T + +L N+ AG S+   +  ++  ++    W   R++ 
Sbjct: 127 AVFGSGILTAAVVAAVV----TFFPLLMNIGAGLSSSTPETVDLVHAYGGGRWTLLRFVQ 182

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P    G   A     +A+ + E            GLGA +  S     +  +   
Sbjct: 183 LPASLPSLFAGLKLAAPATVSAATLYEFL------FSFEGLGANLLTSKSYSDYGLLWTL 236

Query: 559 VLIMCCFVLA 568
           V+I     LA
Sbjct: 237 VVITVLLSLA 246



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 78/225 (34%), Gaps = 15/225 (6%)

Query: 47  DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106
            + +         +L      T       +++ +   F+ A     SR L  + +P+  +
Sbjct: 53  GVGNPAEAAERRAALVPMIGVTLGHSAIGLLLGITAGFIGAVALTVSRALRSIFLPLALL 112

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           +Q++P++         F +          L A         + +  ++   L +   +  
Sbjct: 113 LQTVPLIAMAPVIYAVFGSGI--------LTAAVVAAVVTFFPLLMNIGAGLSSSTPETV 164

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           ++  ++    W    ++ +P S+P L   + ++           E +          G+G
Sbjct: 165 DLVHAYGGGRWTLLRFVQLPASLPSLFAGLKLAAPATVSAATLYEFL------FSFEGLG 218

Query: 227 SYIALAIKEQDLLAIL-YAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           + +  +    D   +    ++T+L  +  Y  ++    ++ + +F
Sbjct: 219 ANLLTSKSYSDYGLLWTLVVITVLLSLAAYGLVVLAETLLLAGRF 263


>gi|239908521|ref|YP_002955263.1| putative phosphate transport system permease protein PstA
           [Desulfovibrio magneticus RS-1]
 gi|239798388|dbj|BAH77377.1| putative phosphate transport system permease protein PstA
           [Desulfovibrio magneticus RS-1]
          Length = 292

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           ++ ++ A VL+ G + +        +    + ++   ++    +      T    L  M 
Sbjct: 29  SLINMAALVLICGFLLVKGLPAISWSF---LTEMPRDSMTAGGILPCILGTIYLSLGTMC 85

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           ++       A      A+  R   ++   ++ +  +P + F  F + +F+  +    +G 
Sbjct: 86  VAFPLGVASAVYLNEYARPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFG---LGV 142

Query: 135 ELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            L +     +  V  +     + +L ++P+   E S     + WQ    + +P +MPG++
Sbjct: 143 SLLSGILTLSILVLPVIIGTAEEALKSVPQTYREASLGLGATKWQTIRLVVLPAAMPGML 202

Query: 194 WNMMMSMS 201
              ++ +S
Sbjct: 203 TGAILGLS 210



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 69/183 (37%), Gaps = 8/183 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIII 396
            S ++++    ++CG  +     +I +       +D      ++     T++  +  + +
Sbjct: 27  ASSLINMAALVLICGFLLVKGLPAISWSFLTEMPRDSMTAGGILPCILGTIYLSLGTMCV 86

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVS-YYHLNPNLWL 452
           A  + +   +++         ++        LA  P+ VF    ++    ++ L  +L  
Sbjct: 87  AFPLGVASAVYLNEYARPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFGLGVSLLS 146

Query: 453 SLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L +      ++         + P  ++E +     T W+  R ++LP   P  +TGAI
Sbjct: 147 GILTLSILVLPVIIGTAEEALKSVPQTYREASLGLGATKWQTIRLVVLPAAMPGMLTGAI 206

Query: 512 TAC 514
              
Sbjct: 207 LGL 209


>gi|329960795|ref|ZP_08299101.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           fluxus YIT 12057]
 gi|328532396|gb|EGF59197.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           fluxus YIT 12057]
          Length = 288

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 68/186 (36%), Gaps = 5/186 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F L    ++  I+  +++          +       +    +      T   M  + + 
Sbjct: 20  LFSLSVVGILFAILGFIVYKGIGVISWEFLTTAPSDGMTAGGILPAIVGTFCLMTGSALF 79

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +     +        A    +  ++  + + +  IP + F  F +  F+N        + 
Sbjct: 80  AFPVGVMSGIYMNEYAPKGWVVRLIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SI 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA    +    +  +  +  ++L  IP  L E SR+   +  Q  W++ +P  MP ++  
Sbjct: 138 LAGSLTLGLLSLPLVIRTTEEALKAIPDSLREGSRALGATKLQTIWHVILPMGMPNIITG 197

Query: 196 MMMSMS 201
           +++++ 
Sbjct: 198 LILALG 203



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--ASI 399
            +  +    ++  +   I ++ IG I   F        +  G I    V    ++  +++
Sbjct: 19  RLFSLSVVGILFAILGFIVYKGIGVISWEFLTTAPSDGMTAGGILPAIVGTFCLMTGSAL 78

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G           +   I+     L+  P+ VF    ++    Y    +  L
Sbjct: 79  FAFPVGVMSGIYMNEYAPKGWVVRLIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGDSIL 138

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +   +   ++        A P+  +E + +   T  +   ++ILP   P  +TG 
Sbjct: 139 AGSLTLGLLSLPLVIRTTEEALKAIPDSLREGSRALGATKLQTIWHVILPMGMPNIITGL 198

Query: 511 ITACG 515
           I A G
Sbjct: 199 ILALG 203


>gi|325660725|ref|ZP_08149353.1| phosphate ABC transporter [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325472799|gb|EGC76009.1| phosphate ABC transporter [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 291

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 79/209 (37%), Gaps = 16/209 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           +  Y   P  +   +   +  +  F +++ +I  +L        P D+  +   + +   
Sbjct: 10  LRAYRRRPGSLILMLLVMLSAVATFAVLLFLIAYILIKGLPHLTP-DLFALKYTSENASL 68

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPI 112
           +P       L  +    +SL+        AA        +  +   ++    + +  IP 
Sbjct: 69  MPA-----LLNTIGMTALSLVIAVPLGIFAAIFLVEYAKRGNKFVEIIRLTTETLSGIPS 123

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + +  F +++F+         + LA  F +    +  +  +  ++L ++P    E S   
Sbjct: 124 IVYGLFGLLFFVTTLGWGY--SLLAGAFTLAIMILPLIIRTTEEALKSVPDSFREGSFGL 181

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  + + +P ++PG++  +++++ 
Sbjct: 182 GAGKLRTVFCVVLPSAVPGILAGVILAVG 210



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 64/197 (32%), Gaps = 18/197 (9%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--------MF 388
            +R   ++ +    +       +    I YI+          +  L   +        + 
Sbjct: 14  RRRPGSLILMLLVMLSAVATFAVLLFLIAYILIKGLPHLTPDLFALKYTSENASLMPALL 73

Query: 389 RVVVLIIIASIIWIPVGIWIGFR-----PHISSKIQPF---AQLLAAFPANVF--FPLVV 438
             + +  ++ +I +P+GI+            +  ++      + L+  P+ V+  F L+ 
Sbjct: 74  NTIGMTALSLVIAVPLGIFAAIFLVEYAKRGNKFVEIIRLTTETLSGIPSIVYGLFGLLF 133

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +       L  +  +       I+        + P+ F+E +        R    ++
Sbjct: 134 FVTTLGWGYSLLAGAFTLAIMILPLIIRTTEEALKSVPDSFREGSFGLGAGKLRTVFCVV 193

Query: 499 LPGIFPYYVTGAITACG 515
           LP   P  + G I A G
Sbjct: 194 LPSAVPGILAGVILAVG 210


>gi|307322839|ref|ZP_07602144.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306891516|gb|EFN22397.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 611

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/493 (13%), Positives = 141/493 (28%), Gaps = 44/493 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-GFLTFTVVYF 123
             RT    L   VIS+   +  A L  K +      +  + I   IP+   FL  T  + 
Sbjct: 84  LLRTLQIGLIVTVISVTAAYPVAYLLTKLKAGA---LSTVSIFILIPLFTAFLIRTYAWM 140

Query: 124 MNLY-----------------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + L                  P  ++    A +  +    +    F+MY S+  I  +  
Sbjct: 141 IILGREGIINNALIWLGFTSSPLPLLNTTFAVVVGMAHVFIPTAIFTMYSSMVRIDHEFA 200

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
             ++       Q F  + +P ++P +    ++       F +   ++      +    I 
Sbjct: 201 RAAQILGAKPVQAFLRVYLPLTLPAVFSASILIFITAIGFYITPALLGGPSDTM----IS 256

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL 286
             I   +       + YA   +L ++ +    +    +       LE       A S   
Sbjct: 257 QLIVAQMTTLLNFELGYASSIVLLLVTICILFVASFFVP------LEMIWSASTAASSED 310

Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346
                   LR +  +           +    R L      +   +  +      + ++ +
Sbjct: 311 EPRAAARLLRHLKRAIAPALLVTETVLHGATRPLLTHNARWLWAYTIIVLMFLTAPLIVV 370

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406
                     +                 +          +    +    +A+II      
Sbjct: 371 VILSFSSSPFVVFPPPGFSLQWWD-KLANATEWRRSFFFSAQLGIASAFVATIIGTMGAF 429

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM-------IFG 459
           W+     +  K+     L     + +  P+V+   S Y     L +           +  
Sbjct: 430 WLVRTKFLFKKMLFLFSL-----SPLMVPVVIIATSLYVFEARLRILGTFGGLVMGHVLL 484

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +  Y++  + A    F    +  AS       +  R+I LP + P  +T  + A   +++
Sbjct: 485 SVPYVIVVMAAALRNFDESLEPAASVHGARPLQVLRFITLPILKPALLTAGLLAFLTSFD 544

Query: 520 ASIVSEVASWGHI 532
             +V         
Sbjct: 545 ELLVGIFLLGRQT 557


>gi|116629212|ref|YP_814384.1| ABC-type phosphate transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|238853904|ref|ZP_04644267.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri 202-4]
 gi|282851003|ref|ZP_06260377.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri 224-1]
 gi|300362091|ref|ZP_07058268.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311111013|ref|ZP_07712410.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri MV-22]
 gi|116094794|gb|ABJ59946.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Lactobacillus gasseri ATCC 33323]
 gi|238833490|gb|EEQ25764.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri 202-4]
 gi|282557955|gb|EFB63543.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri 224-1]
 gi|300354710|gb|EFJ70581.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311066167|gb|EFQ46507.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           gasseri MV-22]
          Length = 296

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L           +            +      +   ++  ++ISL  
Sbjct: 20  IVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A   K      ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ Q++  +P+   +   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFN--LPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           VS ++ I +  +   +  G+   S  ++ +   +YQ    V      +++ +V+ +II+ 
Sbjct: 18  VSIVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISL 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I +  GI++         ++ I+   ++L++ P+ V   F  ++  V +      +  +
Sbjct: 78  PIALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGA 137

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L + F     +  N+       P   ++   +  ++ W+  R I+LP   P  +TG I +
Sbjct: 138 LALTFFNLPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 AGRIFG 203


>gi|320537572|ref|ZP_08037510.1| spermidine/putrescine transport system permease protein PotC family
           protein [Treponema phagedenis F0421]
 gi|320145574|gb|EFW37252.1| spermidine/putrescine transport system permease protein PotC family
           protein [Treponema phagedenis F0421]
          Length = 310

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 7/214 (3%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111
             +  D   L      + +    +  IS +     A      R  G      +  +  + 
Sbjct: 98  QELFFDSAKLWLSFKNSLIIAFVSAFISTVIGSFAAIGVQWYRFKGRFYAQTISFLPMVL 157

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               +  +++ F +     +     + I A  T  +  +   +   L +    + E +R 
Sbjct: 158 PEVIIGMSMLIFFSAI--NIPLGLASIIIAHITFCLPFIFLLVLARLDDFDFSIVEAARD 215

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              + WQ  + + +P  MPG++   +MS++      V +   V G     LP        
Sbjct: 216 LGANEWQTLYKVIIPAIMPGILSGFLMSVTLSLEDFVIT-FFVSGPGSTTLP----LYVF 270

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           ++    +  ++ A+  ++ +  +    L R  + 
Sbjct: 271 SMVRYGISPVINALSLIMVLGTIAIAYLLRNFLK 304



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 67/227 (29%), Gaps = 6/227 (2%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            I W           + D   +      ++    V   I+++I     I + +       
Sbjct: 86  AIVWTGFSLRWYQELFFDSAKLWLSFKNSLIIAFVSAFISTVIGSFAAIGVQWYRFKGRF 145

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ--WYILFNVIAGASAF 475
                  L      V   + +         P    S+++   T    +I   V+A    F
Sbjct: 146 YAQTISFLPMVLPEVIIGMSMLIFFSAINIPLGLASIIIAHITFCLPFIFLLVLARLDDF 205

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                E A       W+    +I+P I P  ++G + +   +    +++   S       
Sbjct: 206 DFSIVEAARDLGANEWQTLYKVIIPAIMPGILSGFLMSVTLSLEDFVITFFVSGPGSTT- 264

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
              L  Y+      G  P +    LIM    +A+   L + L     
Sbjct: 265 ---LPLYVFSMVRYGISPVINALSLIMVLGTIAIAYLLRNFLKTIAA 308


>gi|315931816|gb|EFV10771.1| phosphate ABC transporter, permease protein PstA [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 342

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 126 TLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 185

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 186 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 244

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++  
Sbjct: 245 LPLAMPMILTGSILTLAQA 263



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 120 LSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 179

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 180 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 239

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I     A
Sbjct: 240 VKGIMLPLAMPMILTGSILTLAQA 263


>gi|269219661|ref|ZP_06163515.1| osmoprotectant ABC transporter, permease protein [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269210903|gb|EEZ77243.1| osmoprotectant ABC transporter, permease protein [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 213

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 19/204 (9%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            +   A +    +   ++++ +   V A L+ +S     +   +  I  +IP    +   
Sbjct: 11  QILFAAWQHFSLVTQCLLLATVIGTVVAALSYRSSLFTSLTNNVSAIGLTIPSFALIGLL 70

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +               L A+  +       +  +       + R+  E +R   +S    
Sbjct: 71  IA--------PAGFGVLPAVVVVTFYAALPILRNALVGFSGVDRNTVEAARGQGMSKSAT 122

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---- 235
           F  + +P + P ++  M +S             I      +  PG+G YI   +      
Sbjct: 123 FLKVELPLAWPVILAGMRVSAQMSM-------GIAAISAYVLGPGLGGYIFSGLSRLGGA 175

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
               ++L  ++ ++ + F+ D LL
Sbjct: 176 NSFESVLTGVVAIILLAFILDGLL 199



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A++I   V          +S     + +    P+     L+++   +      
Sbjct: 23  VTQCLLLATVIGTVVAALSYRSSLFTSLTNNVSAIGLTIPSFALIGLLIAPAGFG----V 78

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   +++ F     IL N + G S    +  E A    ++    +  + LP  +P  + G
Sbjct: 79  LPAVVVVTFYAALPILRNALVGFSGVDRNTVEAARGQGMSKSATFLKVELPLAWPVILAG 138

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCF 565
              +   +   + +S             GLG YI    +      SF  V+ GV+ +   
Sbjct: 139 MRVSAQMSMGIAAISAYVLG-------PGLGGYIFSGLSRLGGANSFESVLTGVVAIILL 191

Query: 566 VLALNRFL 573
              L+  L
Sbjct: 192 AFILDGLL 199


>gi|242278798|ref|YP_002990927.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
 gi|242121692|gb|ACS79388.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio salexigens DSM 2638]
          Length = 284

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 108/262 (41%), Gaps = 26/262 (9%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH------SLPQYASRTTLRMLSAMV 77
              L   +  ++L G+   T   D +     +L+ +      +L     ++ L   +A  
Sbjct: 18  WITLFGILPTVMLLGVSFMTRHTDDLIAPVFSLESYFRLFEPALGTMLVQSLLMAGTATF 77

Query: 78  ISLLFTFVYATLAAKSRR------LGMVLVP-----ILDIMQSIPIL---GFLTFTVVYF 123
           + LL  + +A +AA++ +      L +V++P     ++     + +L   G L  T+++ 
Sbjct: 78  LCLLIGYPFAYIAARASKETSRLMLMLVMIPFWTNTLIRTYAMVAVLKADGILNKTLMFL 137

Query: 124 M-NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P K++  + A    +  + +  M   +Y ++  + + L E +R      W  F  
Sbjct: 138 GLIDAPIKIMYTQSAVFIGLVYTLLPFMILPLYAAIEKLDQRLLESARDLGAGRWLAFRK 197

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDLLAI 241
           + +P +MPG+V   M+            +++    T++    +G+YI    +  +DL   
Sbjct: 198 ITIPLTMPGIVSGCMLVFLPALGMFYIPDVLGGARTML----LGNYIRDQFLTARDLPMG 253

Query: 242 LYAMLTMLGVIFLYDQLLFRPM 263
             A + M  ++ L   L +R M
Sbjct: 254 SAASIAMTLMMGLMLALYYRSM 275



 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 7/154 (4%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            +F  L+ + +   +    +++ L+        ++  + A          E A       
Sbjct: 134 LMFLGLIDAPIKIMYTQSAVFIGLVYTLLPF--MILPLYAAIEKLDQRLLESARDLGAGR 191

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI-AESTEK 549
           W  +R I +P   P  V+G +     A     + +V       L    LG YI  +    
Sbjct: 192 WLAFRKITIPLTMPGIVSGCMLVFLPALGMFYIPDVLGGARTML----LGNYIRDQFLTA 247

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
              P      + M   +  +    +  +   G R
Sbjct: 248 RDLPMGSAASIAMTLMMGLMLALYYRSMRRSGRR 281


>gi|86360831|ref|YP_472718.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284933|gb|ABC93991.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 254

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++L+         A+ +     +  I+ I +  P L FL    + F
Sbjct: 52  YLWNSLLVTGAATLLALVIGVPAGYGIARLKAEKSAM--IIMIARMTPGLSFLIPLFLLF 109

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +  ++     +    V  +    ++     P +LEE +     + WQ F  +
Sbjct: 110 QWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFE---TTPMELEEAASIDGATPWQVFRLV 166

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 167 ALPIARPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 224

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      R ++ 
Sbjct: 225 AALIVTLPVLILTVFAQRQIVA 246



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 56  SLLVTGAATLLALVIGVPAGYGIARLKAEKSAM--IIMIARMTPGLSFLIPLFLLFQWLN 113

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   L   +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 114 LLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARP 173

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 174 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 231

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 232 PVLILTVFAQR 242


>gi|23501144|ref|NP_697271.1| sugar ABC transporter permease [Brucella suis 1330]
 gi|148559791|ref|YP_001258263.1| sugar ABC transporter permease [Brucella ovis ATCC 25840]
 gi|254701034|ref|ZP_05162862.1| sugar ABC transporter, permease protein [Brucella suis bv. 5 str.
           513]
 gi|254709378|ref|ZP_05171189.1| sugar ABC transporter, permease protein [Brucella pinnipedialis
           B2/94]
 gi|254713202|ref|ZP_05175013.1| sugar ABC transporter, permease protein [Brucella ceti M644/93/1]
 gi|254716446|ref|ZP_05178257.1| sugar ABC transporter, permease protein [Brucella ceti M13/05/1]
 gi|256030901|ref|ZP_05444515.1| sugar ABC transporter, permease protein [Brucella pinnipedialis
           M292/94/1]
 gi|256060368|ref|ZP_05450541.1| sugar ABC transporter, permease protein [Brucella neotomae 5K33]
 gi|256158940|ref|ZP_05456783.1| sugar ABC transporter, permease protein [Brucella ceti M490/95/1]
 gi|256254306|ref|ZP_05459842.1| sugar ABC transporter, permease protein [Brucella ceti B1/94]
 gi|260169802|ref|ZP_05756613.1| sugar ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261218232|ref|ZP_05932513.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261221462|ref|ZP_05935743.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|261316891|ref|ZP_05956088.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261320920|ref|ZP_05960117.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261324348|ref|ZP_05963545.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261751560|ref|ZP_05995269.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|261759346|ref|ZP_06003055.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265987961|ref|ZP_06100518.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|265997425|ref|ZP_06109982.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|306844885|ref|ZP_07477467.1| sugar ABC transporter, permease protein [Brucella sp. BO1]
 gi|23347019|gb|AAN29186.1| sugar ABC transporter, permease protein [Brucella suis 1330]
 gi|148371048|gb|ABQ61027.1| sugar ABC transporter, permease protein [Brucella ovis ATCC 25840]
 gi|260920046|gb|EEX86699.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti B1/94]
 gi|260923321|gb|EEX89889.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M13/05/1]
 gi|261293610|gb|EEX97106.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M644/93/1]
 gi|261296114|gb|EEX99610.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis B2/94]
 gi|261300328|gb|EEY03825.1| binding-protein-dependent transport system inner membrane component
           [Brucella neotomae 5K33]
 gi|261739330|gb|EEY27326.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261741313|gb|EEY29239.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 5 str. 513]
 gi|262551893|gb|EEZ07883.1| binding-protein-dependent transport system inner membrane component
           [Brucella ceti M490/95/1]
 gi|264660158|gb|EEZ30419.1| binding-protein-dependent transport system inner membrane component
           [Brucella pinnipedialis M292/94/1]
 gi|306274714|gb|EFM56498.1| sugar ABC transporter, permease protein [Brucella sp. BO1]
          Length = 291

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALALTFVIQKHLV 281



 Score = 38.8 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 153 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 212

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 213 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 270

Query: 568 AL 569
           AL
Sbjct: 271 AL 272


>gi|330445171|ref|ZP_08308823.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489362|dbj|GAA03320.1| binding--dependent transport system inner membrane component family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 228

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +   +T   +  + +I  +           +++        +  +L  I++I +SIP 
Sbjct: 20  LIEALGQTLTMVFVSGLIGFVIGIPLGVTLHLTKKNGLLENTVVNNILGIIVNIGRSIP- 78

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AAI  +    +  +   +  +L  IP  L E ++S 
Sbjct: 79  FIILLVAIIPFTRFVVGSSIGT-AAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSM 137

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG++  + +++
Sbjct: 138 GATPLQIIKKVLLPEALPGIINAVTITL 165



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 65/194 (33%), Gaps = 20/194 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V V  +I  +I IP+G+ +             +++ +     +  + P  +   + 
Sbjct: 27  TLTMVFVSGLIGFVIGIPLGVTLHLTKKNGLLENTVVNNILGIIVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  ++    G   +I   V       P+   E A S   T  +  
Sbjct: 86  IIPFTRFVVGSSIGTAAAIVPLAVGAIPFIARLVEGALLEIPSGLVEAAQSMGATPLQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           + ++LP   P  +           + S ++     G +       G           F  
Sbjct: 146 KKVLLPEALPGIINAVTITLVTLVSYSAMAGTVGGGGLGDVGIRYGYQ--------RFDG 197

Query: 555 VVLGVLIMCCFVLA 568
            V+ + ++   VL 
Sbjct: 198 TVMAITVVILIVLV 211


>gi|306842485|ref|ZP_07475136.1| sugar ABC transporter, permease protein [Brucella sp. BO2]
 gi|306287341|gb|EFM58821.1| sugar ABC transporter, permease protein [Brucella sp. BO2]
          Length = 263

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 54  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 112

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 113 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 168

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 169 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 227

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 228 RGMCALAVVMIVPALALTFVIQKHLV 253



 Score = 38.8 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 65  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 124

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 125 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 184

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 185 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 242

Query: 568 AL 569
           AL
Sbjct: 243 AL 244


>gi|297622871|ref|YP_003704305.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
 gi|297164051|gb|ADI13762.1| binding-protein-dependent transport systems inner membrane
           component [Truepera radiovictrix DSM 17093]
          Length = 250

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 10/173 (5%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            T    ++ ++   ++   +G      P +   ++P    L A P  V  PL +      
Sbjct: 59  ATFSAALLGLVFGLVVGAALGFAAALVPFLRELLEPVMLFLNAIPRVVLAPLFIIWFGIG 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             +      +L+       I F V  G         E  ++         R +  P +  
Sbjct: 119 VGSKVALSLVLVAV----LIFFAVYNGFREVDRRLVERVTTLGGGRGVLLREVYGPSVAS 174

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           + ++    A G A+  ++V E  +       + GLG  +  +    +  +VV 
Sbjct: 175 WVMSNLKVALGFAFTGAVVGEFVA------ASRGLGYLMTFALSTYNTAQVVA 221



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 83/246 (33%), Gaps = 15/246 (6%)

Query: 22  LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            LA + V  ++    L      T P  + + +       ++  +   T    L  +V  L
Sbjct: 13  WLALLGVWELVGRAGLLADLYATTPSAVAETLYTLFASGTIWPHLQATFSAALLGLVFGL 72

Query: 81  LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
           +        AA    L  +L P++  + +IP +      +++F      KV  + +    
Sbjct: 73  VVGAALGFAAALVPFLRELLEPVMLFLNAIPRVVLAPLFIIWFGIGVGSKVALSLVLVAV 132

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            IF        F++Y     + R L E   +           +  P     ++ N+ +++
Sbjct: 133 LIF--------FAVYNGFREVDRRLVERVTTLGGGRGVLLREVYGPSVASWVMSNLKVAL 184

Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              +   V  E +          G+G  +  A+   +   ++  +L +   + L   +  
Sbjct: 185 GFAFTGAVVGEFVAAS------RGLGYLMTFALSTYNTAQVVALVLLIGLFVLLLFYVAG 238

Query: 261 RPMIVW 266
           R    W
Sbjct: 239 RLEARW 244


>gi|238895692|ref|YP_002920427.1| putative ABC-type proline/glycine betaine transport system permease
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|262040143|ref|ZP_06013396.1| ABC superfamily ATP binding cassette transporter permease protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|238548009|dbj|BAH64360.1| putative ABC-type proline/glycine betaine transport system permease
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042496|gb|EEW43514.1| ABC superfamily ATP binding cassette transporter permease protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 385

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA--------AI 139
               +  R        L+++Q+IP +      +     L        EL         A+
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-M 198
            A+    +  +   +   L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+      VVA+        +I   G G+ +   +    L  +L  ++  + +  + D L
Sbjct: 320 SVQTVGMAVVAA--------LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDAL 371

Query: 259 L 259
            
Sbjct: 372 F 372



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 19/180 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLS 453
           +W+  RP   +       ++   P+   F L+++ ++                       
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       ++  V+ G    P D  E A++  ++  + +R + LP   P  +      
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 320 SVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|330816844|ref|YP_004360549.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
 gi|327369237|gb|AEA60593.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
          Length = 398

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 51/142 (35%), Gaps = 8/142 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--- 121
           A R    +  +   +           A        L+P+L+++Q+IP +      +V   
Sbjct: 188 ALRHLELVAGSTFAAFAVALPLGIGCAHRPAWRATLMPVLNVVQTIPSIALFGILMVPLG 247

Query: 122 -----YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                  +    G        A+ A+F   +  +  S+   +  +   + E + +  ++ 
Sbjct: 248 LLAAHLPLAAALGISGIGPAPALVALFLYALLPIVSSVVVGIDRVDPGVVEAAAAMGMTR 307

Query: 177 WQKFWYLGVPFSMPGLVWNMMM 198
            Q+   + +  ++P ++  + +
Sbjct: 308 RQRVLDIELALALPVILAGLRI 329



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 15/193 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS------- 439
           +  V      A  + +P+GI    RP   + + P   ++   P+   F +++        
Sbjct: 192 LELVAGSTFAAFAVALPLGIGCAHRPAWRATLMPVLNVVQTIPSIALFGILMVPLGLLAA 251

Query: 440 ------CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
                  +    + P   L  L        I+ +V+ G         E A++  +T  + 
Sbjct: 252 HLPLAAALGISGIGPAPALVAL-FLYALLPIVSSVVVGIDRVDPGVVEAAAAMGMTRRQR 310

Query: 494 WRYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              I L    P  + G           A++ + +   G       GLG    +    G+ 
Sbjct: 311 VLDIELALALPVILAGLRIVLVQNVGLAAVAALIGGGGFGTFIFQGLGQAATDLVLLGAL 370

Query: 553 PEVVLGVLIMCCF 565
           P + L  +I   F
Sbjct: 371 PTIALAFVISVLF 383


>gi|326382326|ref|ZP_08204018.1| ABC quaternary amine transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199056|gb|EGD56238.1| ABC quaternary amine transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 190

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 61/188 (32%), Gaps = 15/188 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M+  ++++ +          +S     +   +   + +IP    L   +       P   
Sbjct: 1   MIQCLLLATIIGVGVGIFVYRSPGGSAIATALSSTILTIPSFALLGLLIPIVGLGVPP-- 58

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  + A+    +  +  +    L  +   + + ++   +S ++    + +P + P 
Sbjct: 59  ------TVIALTMYSLLPIVRNTIVGLSAVDPAVTDAAKGIGMSRFRVLAQVELPLAWPS 112

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           ++  M ++       +  +            PG+G+ I   +        +   LT   +
Sbjct: 113 ILTGMRVATQMAMGILAIA-------AYAKGPGLGNLIFSGLSRVGSPTAIPQALTGTVL 165

Query: 252 IFLYDQLL 259
           I +   +L
Sbjct: 166 IVILALIL 173



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 15/181 (8%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +++A+II + VGI++   P  S+     +  +   P+     L++  V        + L+
Sbjct: 5   LLLATIIGVGVGIFVYRSPGGSAIATALSSTILTIPSFALLGLLIPIVGLGVPPTVIALT 64

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  +      I+ N I G SA      + A    ++ +R    + LP  +P  +TG   A
Sbjct: 65  MYSLL----PIVRNTIVGLSAVDPAVTDAAKGIGMSRFRVLAQVELPLAWPSILTGMRVA 120

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCFVLAL 569
              A     ++  A          GLG  I    +      + P+ + G +++    L L
Sbjct: 121 TQMAMGILAIAAYAKG-------PGLGNLIFSGLSRVGSPTAIPQALTGTVLIVILALIL 173

Query: 570 N 570
           +
Sbjct: 174 D 174


>gi|307544718|ref|YP_003897197.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216742|emb|CBV42012.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 388

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 60/150 (40%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  +   A  T L +L  + +S     + A      A   R+  ++   ++ + +IP +
Sbjct: 162 ELAGIASAAMGTVLTLLVTLAVSFPIGVMTAVYLEEFAPDNRVTQLIEININNLAAIPSI 221

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N + G    + +     +    +  +  +   +L ++P  +   +    
Sbjct: 222 LFGLLGLAIFINFF-GVPRSSPVVGGLTLALMTLPVIIIATRTALRSVPDSIRHAAFGVG 280

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S WQ      +P ++PG++   ++ ++  
Sbjct: 281 CSRWQMVRDHVLPVALPGIMTGSIIGLAQA 310



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 12/138 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
           V+ +++   +  P+G+              ++  I+     LAA P+ +F      + ++
Sbjct: 174 VLTLLVTLAVSFPIGVMTAVYLEEFAPDNRVTQLIEININNLAAIPSILFGLLGLAIFIN 233

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +P +    L +  T   I+        + P+  +  A     + W+  R  +L
Sbjct: 234 FFGVPRSSPVVGGLTLALM-TLPVIIIATRTALRSVPDSIRHAAFGVGCSRWQMVRDHVL 292

Query: 500 PGIFPYYVTGAITACGGA 517
           P   P  +TG+I     A
Sbjct: 293 PVALPGIMTGSIIGLAQA 310


>gi|116668983|ref|YP_829916.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter sp. FB24]
 gi|116609092|gb|ABK01816.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Arthrobacter sp. FB24]
          Length = 298

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 4/188 (2%)

Query: 79  SLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           SLL     A   A+ + R   +++  +      P +  +T     F N+     +G   A
Sbjct: 106 SLLIGVFAAYALARLNFRFKYLVLGFILGASMFPGVALITPLFQLFTNIG---WMGTYQA 162

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I    +  +    ++M      +P +LEE +R    +  Q F  + +P + P +    +
Sbjct: 163 LIIPNISFVLPLTVYTMTSFFREMPWELEESARVDGCTQGQAFRKVILPLAAPAIFTTAI 222

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++    W   + +  +    T      I S+      +    AI+ A   +   + +   
Sbjct: 223 LAFISSWNEFLIASQLSSDATQPVTVAIASFAGAQPNQIPYTAIMAAGTIVTIPLVILVL 282

Query: 258 LLFRPMIV 265
           +  R ++ 
Sbjct: 283 VFQRKIVA 290



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 68/188 (36%), Gaps = 4/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++F  VV+ +++ +I +     +          +  F    + FP      PL     + 
Sbjct: 95  SVFIGVVVTVVSLLIGVFAAYALARLNFRFKYLVLGFILGASMFPGVALITPLFQLFTNI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     L +  I       ++ + +     P + +E A     T  + +R +ILP   
Sbjct: 155 GWMGTYQALIIPNISFVLPLTVYTMTSFFREMPWELEESARVDGCTQGQAFRKVILPLAA 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG--VLI 561
           P   T AI A   +WN  +++   S       T  + ++      +  +  ++    ++ 
Sbjct: 215 PAIFTTAILAFISSWNEFLIASQLSSDATQPVTVAIASFAGAQPNQIPYTAIMAAGTIVT 274

Query: 562 MCCFVLAL 569
           +   +L L
Sbjct: 275 IPLVILVL 282


>gi|111226061|ref|YP_716855.1| putative ABC transporter permease [Frankia alni ACN14a]
 gi|111153593|emb|CAJ65351.1| putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 223

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 7/161 (4%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           +       D +           +        L   +++ I+               R G 
Sbjct: 1   MSTLGSAFDWLTTGASWRGDEGIAHRLGEHLLLTGASVGIACAVALPVGIGLGHLGRGGT 60

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           + + + +I +++P    L   ++    L  G         +FAI       +  + Y  +
Sbjct: 61  LAINVSNIGRAVPTFAVL--VLLAIGPLGIGDTTTVVALTLFAIA-----PLVTNSYVGM 113

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +E +R   +SG Q    + +P ++P ++  + ++
Sbjct: 114 QEVDAGAKEAARGMGMSGGQLLRRVELPLALPMIMLGLRLA 154



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 10/204 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
            +  ++    +++    +       +      + IA  + +PVGI +G      +     
Sbjct: 6   SAFDWLTTGASWRGDEGIAHRLGEHLLLTGASVGIACAVALPVGIGLGHLGRGGTLAINV 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P      LV+  +    +     +  L +F     ++ N   G        KE
Sbjct: 66  SNIGRAVPTFAV--LVLLAIGPLGIGDTTTVVALTLF-AIAPLVTNSYVGMQEVDAGAKE 122

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A    ++G +  R + LP   P  + G   A        + +   +             
Sbjct: 123 AARGMGMSGGQLLRRVELPLALPMIMLGLRLAA----VQVVATATIAALIGGGGLG---R 175

Query: 542 YIAESTEKGSFPEVVLGVLIMCCF 565
           ++ +       PEVV G +++   
Sbjct: 176 FVVDGLANNRRPEVVGGAILVAVL 199


>gi|53714014|ref|YP_100006.1| putrescine transport system permease PotH [Bacteroides fragilis
           YCH46]
 gi|60682210|ref|YP_212354.1| putative ABC transporter membrane protein [Bacteroides fragilis
           NCTC 9343]
 gi|255009680|ref|ZP_05281806.1| putative ABC transport system, membrane protein [Bacteroides
           fragilis 3_1_12]
 gi|265764364|ref|ZP_06092932.1| putrescine transport system permease PotH [Bacteroides sp. 2_1_16]
 gi|313147466|ref|ZP_07809659.1| putrescine transport system permease potH [Bacteroides fragilis
           3_1_12]
 gi|52216879|dbj|BAD49472.1| putrescine transport system permease protein PotH [Bacteroides
           fragilis YCH46]
 gi|60493644|emb|CAH08433.1| putative ABC transport system, membrane protein [Bacteroides
           fragilis NCTC 9343]
 gi|263256972|gb|EEZ28318.1| putrescine transport system permease PotH [Bacteroides sp. 2_1_16]
 gi|301163688|emb|CBW23242.1| putative ABC transport system, membrane protein [Bacteroides
           fragilis 638R]
 gi|313136233|gb|EFR53593.1| putrescine transport system permease potH [Bacteroides fragilis
           3_1_12]
          Length = 265

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 10/252 (3%)

Query: 9   PFISRRIFP-NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
            F SR+ +        A  +VI ++ I+++   + +     ++        H        
Sbjct: 7   FFSSRKSWTLPYIIFSAIFVVIPLLLIVVYAFTDDSGHL-TLENFAKFFQHHEAINTFVY 65

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-IPILGFLTFTVVYFMNL 126
           +    +   ++ +L  +  A + + ++      + +L I+   + IL     TV  F   
Sbjct: 66  SIGIAIITTIVCILLGYPAAWILSNAKLNRSKTMVVLFILPMWVNILVRTLATVALFDFF 125

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V   E A IF +  + +  M + +Y +L  +     E ++    +  Q F+   +P
Sbjct: 126 ---SVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLP 182

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            SMPG++  +MM           +E++ + +  +     G+ I   I            L
Sbjct: 183 LSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSL 238

Query: 247 TMLGVIFLYDQL 258
            ML +I      
Sbjct: 239 IMLLLIAATSLF 250



 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 14/253 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVI--WLGCI 385
             L +  + R S+ L    F  +  V   + I   +      H T ++            
Sbjct: 2   KRLSVFFSSRKSWTLPYIIFSAIFVVIPLLLIVVYAFTDDSGHLTLENFAKFFQHHEAIN 61

Query: 386 TMFRVVVLIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSC 440
           T    + + II +I+ I +G    WI     ++         +     N+    +  V+ 
Sbjct: 62  TFVYSIGIAIITTIVCILLGYPAAWILSNAKLNRSKTMVVLFILPMWVNILVRTLATVAL 121

Query: 441 VSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
             ++ +       +  +       +++ +        + + E A        + +   +L
Sbjct: 122 FDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVL 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P   P  ++G +       +   ++E+ +  +I L     G  I E+     +       
Sbjct: 182 PLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKL----FGTTIQENINNSMWNYGAALS 237

Query: 560 LIMCCFVLALNRF 572
           LIM   + A + F
Sbjct: 238 LIMLLLIAATSLF 250


>gi|313906582|ref|ZP_07839909.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313468589|gb|EFR63964.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 273

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNH----FTYQDVLYVIWLGCI---------TMFRVVVLII 395
             ++ G+ +   W+ +  +++         DV   IW   +         TM+ V+V  +
Sbjct: 34  AALLFGILLLAFWEGLSLLIDSKIVLPGPWDVAESIWEKRVEIFTIHLPATMYVVLVGGV 93

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            + +    + I +     I   + P   +    P     P++V  + Y          ++
Sbjct: 94  SSVLFGALMAILMDASDLIRRAVYPILTVTQVIPTMCVAPVLVLWLGYS----VKMRIVV 149

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +I    + +  ++  G  A   +  E+  +F       + ++ LP   PY+ +       
Sbjct: 150 VILVNFFPVTIDLFDGLRAVNREQAELMDTFGAGVLYKFVHLKLPSALPYFFSSLHVVVP 209

Query: 516 GAWNASIVSEVAS 528
            A   + ++E   
Sbjct: 210 WAVIGATIAEWLG 222



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 9/204 (4%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           P    ++    +   +  +     +++L+        P D+ + +     V     +   
Sbjct: 25  PGKDRKKKAAALLFGILLLAFWEGLSLLIDSKIVLPGPWDVAESI-WEKRVEIFTIHLPA 83

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L   V S+LF  + A L   S  +   + PIL + Q IP +      V++     
Sbjct: 84  TMYVVLVGGVSSVLFGALMAILMDASDLIRRAVYPILTVTQVIPTMCVAPVLVLWLGYSV 143

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             +        I  +     + +T  ++  L  + R+  E+  +F      KF +L +P 
Sbjct: 144 KMR--------IVVVILVNFFPVTIDLFDGLRAVNREQAELMDTFGAGVLYKFVHLKLPS 195

Query: 188 SMPGLVWNMMMSMSGGWFFVVASE 211
           ++P    ++ + +         +E
Sbjct: 196 ALPYFFSSLHVVVPWAVIGATIAE 219


>gi|302388939|ref|YP_003824760.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Thermosediminibacter oceani DSM 16646]
 gi|302199567|gb|ADL07137.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Thermosediminibacter oceani DSM 16646]
          Length = 294

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 11/136 (8%)

Query: 76  MVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           M+I+ +F       AA       K  +    +   +  +  IP + +    +  F+    
Sbjct: 81  MIITAVFAIPLGIAAAVFLEEYSKKSKFLSFIQVNIYNLAGIPSIVYGILGLTVFV---R 137

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             ++G  L A        +  +     Q ++  +P+     S +   S WQ   Y+ +P 
Sbjct: 138 WMMLGRSLLAGGLTMGLLILPVIIVTAQEAIRAVPQSWRHASYALGASKWQTIRYVVLPS 197

Query: 188 SMPGLVWNMMMSMSGG 203
           ++PG++  +++++S  
Sbjct: 198 ALPGILTGIILALSRA 213



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 9/140 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPL-VV 438
           ++  + ++II ++  IP+GI           +    S IQ     LA  P+ V+  L + 
Sbjct: 74  LYGTIYVMIITAVFAIPLGIAAAVFLEEYSKKSKFLSFIQVNIYNLAGIPSIVYGILGLT 133

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYI 497
             V +  L  +L    L +      ++         A P  ++  + +   + W+  RY+
Sbjct: 134 VFVRWMMLGRSLLAGGLTMGLLILPVIIVTAQEAIRAVPQSWRHASYALGASKWQTIRYV 193

Query: 498 ILPGIFPYYVTGAITACGGA 517
           +LP   P  +TG I A   A
Sbjct: 194 VLPSALPGILTGIILALSRA 213


>gi|298246540|ref|ZP_06970346.1| phosphate ABC transporter, inner membrane subunit PstC
           [Ktedonobacter racemifer DSM 44963]
 gi|297554021|gb|EFH87886.1| phosphate ABC transporter, inner membrane subunit PstC
           [Ktedonobacter racemifer DSM 44963]
          Length = 303

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 5/177 (2%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P       P       +      T   +L A  +S  F           R L  +L P+L
Sbjct: 63  PTAGNSDNPAYGAWGLILGSIIITLASVLIATPLS--FGMALFMAEVTPRWLSRILQPLL 120

Query: 105 DIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNI 161
           ++   +P  ++GFL  TV+        + +G    A   +    +     S+   ++  +
Sbjct: 121 EVFTGMPSVVIGFLGLTVLVPWLGTISQTLGYGYGAAIIVLVVMIIPTIVSVSIDAIRAV 180

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           P  + E S +   S WQ      +P +  GL   +++ M+      +A  M++ G +
Sbjct: 181 PGSVREASLALGSSKWQTMSKAIIPAASTGLATAVVLGMARAIGETLAVAMVLGGQS 237



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 9/178 (5%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420
           W       ++  Y     ++    IT+  V++   ++    + + +       +S  +QP
Sbjct: 61  WDPTAGNSDNPAYGAWGLILGSIIITLASVLIATPLSF--GMALFMAEVTPRWLSRILQP 118

Query: 421 FAQLLAAFPANV--FFPLVVSCVSYYHLNPNLW----LSLLMIFGTQWYILFNV-IAGAS 473
             ++    P+ V  F  L V       ++  L      +++++       + +V I    
Sbjct: 119 LLEVFTGMPSVVIGFLGLTVLVPWLGTISQTLGYGYGAAIIVLVVMIIPTIVSVSIDAIR 178

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A P   +E + +   + W+     I+P       T  +     A   ++   +   G 
Sbjct: 179 AVPGSVREASLALGSSKWQTMSKAIIPAASTGLATAVVLGMARAIGETLAVAMVLGGQ 236


>gi|291563809|emb|CBL42625.1| ABC-type metal ion transport system, permease component
           [butyrate-producing bacterium SS3/4]
          Length = 226

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQS 109
              L +   +T   ++ +  IS++F   +  +          K++ +  +L  +++I +S
Sbjct: 16  PDELLESFGQTIYMVIVSGAISMVFGLFFGIVLTATAPKGVLKNKVVFNILDKLVNIFRS 75

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++    +  G  IG +  AI  +    V   T  +  +L  +   L E +
Sbjct: 76  IP-FVILLTALIPLTRMVVGTAIGTK-GAILPLIFGTVPFFTRQIESALAEVDYGLIEAA 133

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            S   S W+  + + +  S+PG+V  M ++ 
Sbjct: 134 ESMGNSPWEIIFRVYLKESVPGIVRAMQITF 164



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 20/196 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPAN----VF 433
           T++ V+V   I+ +  +  GI +             + + +     +  + P        
Sbjct: 26  TIYMVIVSGAISMVFGLFFGIVLTATAPKGVLKNKVVFNILDKLVNIFRSIPFVILLTAL 85

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            PL    V          L L  IFGT  +    + +  +       E A S   + W  
Sbjct: 86  IPLTRMVVGTAIGTKGAILPL--IFGTVPFFTRQIESALAEVDYGLIEAAESMGNSPWEI 143

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + L    P  V             + ++     G +          I     +G   
Sbjct: 144 IFRVYLKESVPGIVRAMQITFISLVGLTAMAGAVGGGGLGD------FAIRYGHSRGQTD 197

Query: 554 EVVLGVLIMCCFVLAL 569
              + V+I+   V  +
Sbjct: 198 VTYVTVIIILIMVSLI 213


>gi|312978121|ref|ZP_07789866.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus CTV-05]
 gi|310895096|gb|EFQ44165.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus CTV-05]
          Length = 291

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 74/211 (35%), Gaps = 12/211 (5%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT-MFRVVV 392
             ++    +   ++ +   +   + + +   I +       D L     G     F  + 
Sbjct: 3   RAKKKDRFMTGVFYAIGWLMLAFLLYLTFTIIFDGLKGFSPDFLGAAGNGIFNQFFNTLY 62

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSY 443
           L+ ++ ++ +P+GI  G           + + ++   + L++ P+ V   F  +   +  
Sbjct: 63  LVFLSLLVSVPIGIGAGVYLAEYAKEGKLLTMLEVSIESLSSLPSIVIGLFGYLAFIMWT 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 +  +L +   +   I         A P ++KE +     T     R +++P   
Sbjct: 123 GMSWNIVAGALTISILSIPLITTETNNAIRALPIEYKEGSLGLGATKSETIRKVLIPAAM 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           P  +TG I A G  +  +      S    ++
Sbjct: 183 PQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G +L  +   ++ + S+P +    F  + F+
Sbjct: 60  TLYLVFLSLLVSVPIGIGAGVYLAEYAKEGKLLTMLEVSIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    +A    I    +  +T     ++  +P + +E S     +  +    + 
Sbjct: 120 MW--TGMSWNIVAGALTISILSIPLITTETNNAIRALPIEYKEGSLGLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|298484080|ref|ZP_07002248.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           D22]
 gi|298269761|gb|EFI11354.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           D22]
          Length = 291

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S+++   IF LL+  +V+ +  IL   + +                 +    +      T
Sbjct: 13  SQKVAFGIFRLLSLCIVLILFAILGFIVYKGIGAISWDFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPIGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   V  GI   S  +I +  T       IW   + T + +V   + A  I 
Sbjct: 28  IVLILFAILGFIVYKGIGAISWDFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFPIG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        +   I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|169832099|ref|YP_001718081.1| phosphate ABC transporter, inner membrane subunit PstA [Candidatus
           Desulforudis audaxviator MP104C]
 gi|169638943|gb|ACA60449.1| phosphate ABC transporter, inner membrane subunit PstA [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 287

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 11/206 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASII 400
           +  +  F  + G+   I +  IG +  HF       +   G I   +     L+ +A  +
Sbjct: 22  LSILVVFGSLFGIFAHIFYHGIGRVNLHFLLAYPEDMGRAGGIFPAIMGTAWLVGLALAV 81

Query: 401 WIPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVF--FPLVVSCVSYYHLNPNLW 451
             P+GI         ++  PF ++       LA  P+ VF  F      +        L 
Sbjct: 82  AAPLGILGATYLTEYARKGPFVRIVRFGVDTLAGVPSIVFGLFGFAFLVIFCGFRWSVLS 141

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L + F     I+        A  ND++E + S   T W+    ++LP   P  +TG I
Sbjct: 142 GGLTLAFMILPTIIKTTEESIKAVSNDYREASLSLGATKWQTVALVVLPAALPGILTGII 201

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            A G A   +    + +   + + T+
Sbjct: 202 LALGRAAGETAAILLTAGSSLTVPTS 227



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY 122
           T   +  A+ ++     + AT     A+      ++   +D +  +P  + G   F  + 
Sbjct: 71  TAWLVGLALAVAAPLGILGATYLTEYARKGPFVRIVRFGVDTLAGVPSIVFGLFGFAFLV 130

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +   V+   L   F I  +    +  +  +S+  +  D  E S S   + WQ    
Sbjct: 131 IFCGFRWSVLSGGLTLAFMILPT----IIKTTEESIKAVSNDYREASLSLGATKWQTVAL 186

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
           + +P ++PG++  +++++        A+ ++  G +
Sbjct: 187 VVLPAALPGILTGIILALGRA-AGETAAILLTAGSS 221


>gi|15924378|ref|NP_371912.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156979707|ref|YP_001441966.1| hypothetical protein SAHV_1376 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|255006177|ref|ZP_05144778.2| hypothetical protein SauraM_06900 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|14247159|dbj|BAB57550.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156721842|dbj|BAF78259.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
          Length = 308

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LT+      +
Sbjct: 92  TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTYVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 81/238 (34%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +S       +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTYVTPVLRSFISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|331683805|ref|ZP_08384401.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H299]
 gi|331078757|gb|EGI49959.1| inner membrane ABC transporter permease protein YehW [Escherichia
           coli H299]
          Length = 243

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 14/205 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA---- 513
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 514 CGGAWNASIVSEVASWGHIHLRTTG 538
            G A  AS V        I +  +G
Sbjct: 183 IGTATIASTVGASTLGTPIIIGLSG 207



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L       + D+L  R +   S 
Sbjct: 215 QGALLAALAAIIADRLFERLVQALSQ 240


>gi|302880119|ref|YP_003848683.1| phosphonate ABC transporter, inner membrane subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582908|gb|ADL56919.1| phosphonate ABC transporter, inner membrane subunit [Gallionella
           capsiferriformans ES-2]
          Length = 268

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 76/211 (36%), Gaps = 16/211 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPI 112
           +V +  +    T    ++   +++ F+   A LAA++      +  +   +L+ ++SIP 
Sbjct: 69  EVANWWKPLLDTLAMSIAGTALAVAFSLPLAFLAAQNTSPHPLVYQMARGLLNTLRSIPE 128

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L      V          V+   L +I  +             +++ +      E +R+ 
Sbjct: 129 LILGIIFVAAVGFGALPGVLALGLHSIGMVGKF--------FAEAIEHADPAPIEAARAA 180

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q   +  +P  +P L    +      +       M+  G     L G        
Sbjct: 181 GASPLQVLLHGVLPQVLPQLADTSIYRWEYNFRASTVMGMVGAGGIGFELMG----SLRI 236

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           ++ QD+ AIL  +L M+ ++  +   L +  
Sbjct: 237 MQYQDVSAILLVILVMVTLVDAFSGYLRKRF 267



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 63/193 (32%), Gaps = 19/193 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T+   +    +A    +P+           P +    +     L + P  +   + V+ V
Sbjct: 80  TLAMSIAGTALAVAFSLPLAFLAAQNTSPHPLVYQMARGLLNTLRSIPELILGIIFVAAV 139

Query: 442 SYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +  L   L L L  + + G  +                  E A +   +  +   + +L
Sbjct: 140 GFGALPGVLALGLHSIGMVGKFF------AEAIEHADPAPIEAARAAGASPLQVLLHGVL 193

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P     +I      + AS V  +   G       G+G  +  S     + +V   +
Sbjct: 194 PQVLPQLADTSIYRWEYNFRASTVMGMVGAG-------GIGFELMGSLRIMQYQDVSAIL 246

Query: 560 LIMCCFVLALNRF 572
           L++   V  ++ F
Sbjct: 247 LVILVMVTLVDAF 259


>gi|186682956|ref|YP_001866152.1| binding-protein-dependent transporters inner membrane component
           [Nostoc punctiforme PCC 73102]
 gi|186465408|gb|ACC81209.1| binding-protein-dependent transport systems inner membrane
           component [Nostoc punctiforme PCC 73102]
          Length = 219

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 5/140 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            + Q+       +  A+ I++L       L  +   L   ++ I +I+Q+IP L      
Sbjct: 21  EILQHTLEHLFLVGIAIGIAILIGIPLGILITRKTYLRQPILGIANILQTIPSLALFGLL 80

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +   +    G V      AI A+    +  +  + Y  +  +   + E  R   ++  Q 
Sbjct: 81  IPVPIIGGIGAVP-----AIVALTVYSLLPIIRNTYTGITGVDPAIREAGRGMGMTDRQL 135

Query: 180 FWYLGVPFSMPGLVWNMMMS 199
              + +P +M  ++  + ++
Sbjct: 136 LLQVEIPLAMGVILAGVRVA 155



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F V + I IA +I IP+GI I  + ++   I   A +L   P+   F L++       +
Sbjct: 30  LFLVGIAIGIAILIGIPLGILITRKTYLRQPILGIANILQTIPSLALFGLLIPVPIIGGI 89

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +  L ++ +   I+ N   G +      +E      +T  +    + +P      
Sbjct: 90  GAVPAIVALTVY-SLLPIIRNTYTGITGVDPAIREAGRGMGMTDRQLLLQVEIPLAMGVI 148

Query: 507 VTGAITA 513
           + G   A
Sbjct: 149 LAGVRVA 155


>gi|114763107|ref|ZP_01442533.1| putative choline uptake ABC transporter permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114544160|gb|EAU47169.1| putative choline uptake ABC transporter permease protein
           [Roseovarius sp. HTCC2601]
          Length = 246

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 22/193 (11%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVP----ILDIMQSIPILGFLTFTVVYFMNLY 127
           +  A   + L     A L   +R  G    P    I +I Q+ P +  L   V       
Sbjct: 57  VALASGAATLVAVTLAVLV--TRPAGAAFRPLSRTITNIGQTFPPVAVLALAVPALGFGA 114

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              ++   L  +  IF + V          L ++P    E +R   L   Q+ + + +P 
Sbjct: 115 GPTLVALFLYGLLPIFENAVT--------GLSSLPPSAMEAARGIGLDRRQRLFQVELPL 166

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  + +S       VV +       + +    +G  I   +   +   +L   L 
Sbjct: 167 ALPVILTGIRLS-------VVIALGTATIGSTVAARTLGEVIIAGLLTNNTAYVLQGGLI 219

Query: 248 MLG-VIFLYDQLL 259
           +    + +YD L+
Sbjct: 220 VGLFAVLIYDALV 232



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 17/184 (9%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQP----FAQLLAAFPANVFFPLVVSCVSYYH 445
           V +    A+++ + + + +       +  +P       +   FP      L V  + +  
Sbjct: 57  VALASGAATLVAVTLAVLV--TRPAGAAFRPLSRTITNIGQTFPPVAVLALAVPALGFGA 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               + L L  +      I  N + G S+ P    E A    +   +    + LP   P 
Sbjct: 115 GPTLVALFLYGLL----PIFENAVTGLSSLPPSAMEAARGIGLDRRQRLFQVELPLALPV 170

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +TG   +   A   + +          +    LG  I       +   V+ G LI+  F
Sbjct: 171 ILTGIRLSVVIALGTATIG-------STVAARTLGEVIIAGLLTNNTAYVLQGGLIVGLF 223

Query: 566 VLAL 569
            + +
Sbjct: 224 AVLI 227


>gi|21283005|ref|NP_646093.1| hypothetical protein MW1276 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483579|ref|YP_040803.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486230|ref|YP_043451.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57651888|ref|YP_186275.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160125|ref|YP_493979.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88195114|ref|YP_499914.1| hypothetical protein SAOUHSC_01387 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221511|ref|YP_001332333.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161509554|ref|YP_001575213.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221140587|ref|ZP_03565080.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|257425453|ref|ZP_05601878.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257428113|ref|ZP_05604511.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430744|ref|ZP_05607126.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433504|ref|ZP_05609862.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436345|ref|ZP_05612392.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus M876]
 gi|258423652|ref|ZP_05686540.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9635]
 gi|258451785|ref|ZP_05699809.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A5948]
 gi|262049857|ref|ZP_06022720.1| hypothetical protein SAD30_0586 [Staphylococcus aureus D30]
 gi|262052198|ref|ZP_06024405.1| hypothetical protein SA930_0548 [Staphylococcus aureus 930918-3]
 gi|282903969|ref|ZP_06311857.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905734|ref|ZP_06313589.1| phosphate ABC transporter permease PstC [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908705|ref|ZP_06316523.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282910969|ref|ZP_06318771.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914177|ref|ZP_06321964.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282916655|ref|ZP_06324413.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus D139]
 gi|282919099|ref|ZP_06326834.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus C427]
 gi|282924282|ref|ZP_06331956.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus C101]
 gi|282926210|ref|ZP_06333844.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9765]
 gi|283770460|ref|ZP_06343352.1| phosphate transport system permease [Staphylococcus aureus subsp.
           aureus H19]
 gi|283958151|ref|ZP_06375602.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|284024389|ref|ZP_06378787.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501204|ref|ZP_06667055.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510165|ref|ZP_06668873.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus M809]
 gi|293526757|ref|ZP_06671442.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|294848393|ref|ZP_06789140.1| phosphate ABC transporter [Staphylococcus aureus A9754]
 gi|295427902|ref|ZP_06820534.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|21204444|dbj|BAB95141.1| MW1276 [Staphylococcus aureus subsp. aureus MW2]
 gi|49241708|emb|CAG40398.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49244673|emb|CAG43105.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286074|gb|AAW38168.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126099|gb|ABD20613.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202672|gb|ABD30482.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374311|dbj|BAF67571.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368363|gb|ABX29334.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271910|gb|EEV04048.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257274954|gb|EEV06441.1| phosphate ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257278872|gb|EEV09491.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281597|gb|EEV11734.1| phosphate ABC transporter permease [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284627|gb|EEV14747.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus M876]
 gi|257846150|gb|EEV70176.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9635]
 gi|257860616|gb|EEV83440.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A5948]
 gi|259159942|gb|EEW44979.1| hypothetical protein SA930_0548 [Staphylococcus aureus 930918-3]
 gi|259162081|gb|EEW46660.1| hypothetical protein SAD30_0586 [Staphylococcus aureus D30]
 gi|269940884|emb|CBI49266.1| ABC transporter permease protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282313669|gb|EFB44062.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus C101]
 gi|282316909|gb|EFB47283.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus C427]
 gi|282319142|gb|EFB49494.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus D139]
 gi|282322245|gb|EFB52569.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324664|gb|EFB54974.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282326969|gb|EFB57264.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282331026|gb|EFB60540.1| phosphate ABC transporter permease PstC [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282592274|gb|EFB97292.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           A9765]
 gi|282595587|gb|EFC00551.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus C160]
 gi|283460607|gb|EFC07697.1| phosphate transport system permease [Staphylococcus aureus subsp.
           aureus H19]
 gi|283470602|emb|CAQ49813.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283790300|gb|EFC29117.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920829|gb|EFD97892.1| phosphate ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096209|gb|EFE26470.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467109|gb|EFF09627.1| phosphate ABC transporter, permease PstC [Staphylococcus aureus
           subsp. aureus M809]
 gi|294825193|gb|EFG41615.1| phosphate ABC transporter [Staphylococcus aureus A9754]
 gi|295128260|gb|EFG57894.1| phosphate ABC transporter [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|302333001|gb|ADL23194.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751218|gb|ADL65395.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|315195280|gb|EFU25667.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315196352|gb|EFU26704.1| probable phosphate ABC transporter permease [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|323441173|gb|EGA98880.1| phosphate ABC transporter permease [Staphylococcus aureus O11]
 gi|323444042|gb|EGB01653.1| phosphate ABC transporter permease [Staphylococcus aureus O46]
 gi|329728713|gb|EGG65140.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus 21189]
 gi|329728916|gb|EGG65334.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 308

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
             PG      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 FIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 24/238 (10%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  + IW   I   ++ V   IA+I  +PVG+                 I+P  +
Sbjct: 71  NPTGSDPKFGIWALIIGTLKITV---IATIFAVPVGLGAAIYLSEYASDRARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +        +   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      V   + A   A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TTG-------LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            +         G  +  +T   +F   +   +    F L +   + + L  + ++  R
Sbjct: 248 LSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|296166875|ref|ZP_06849292.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295897752|gb|EFG77341.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 228

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 69/187 (36%), Gaps = 12/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +++ L           ++     +      ++ +IP L          + +  G  I
Sbjct: 23  LVPVLVGLALAVPLGAAVRRAPVARRLTTATASVVFTIPSLALF-----VVLPMIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   + A+       +  ++ ++L  +P  + + + +       +   + +P S+P L
Sbjct: 78  LDEANVMVALTAYTAALLVRAVLEALDAVPAQVRDAATAVGYPPVARMLKVELPLSIPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + +        V    M+ VG  VI + G+G++     +      IL  ++ +  + 
Sbjct: 138 VAGLRV------VVVTNIAMVSVGS-VIGIGGLGTWFTEGYQTNKSDQILAGIVALFVLA 190

Query: 253 FLYDQLL 259
            + D L+
Sbjct: 191 IVIDALI 197



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 63/183 (34%), Gaps = 8/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V +++   + +P+G  +   P         A ++   P+   F ++   +    L+   
Sbjct: 23  LVPVLVGLALAVPLGAAVRRAPVARRLTTATASVVFTIPSLALFVVLPMIIGTRILDEAN 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L  +     ++  V+    A P   ++ A++           + LP   P  V G 
Sbjct: 83  VMVALTAYTAA-LLVRAVLEALDAVPAQVRDAATAVGYPPVARMLKVELPLSIPVLVAGL 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                       V  V   G       GLG +  E  +     +++ G++ +    + ++
Sbjct: 142 RVVVVTNIAMVSVGSVIGIG-------GLGTWFTEGYQTNKSDQILAGIVALFVLAIVID 194

Query: 571 RFL 573
             +
Sbjct: 195 ALI 197


>gi|294083613|ref|YP_003550370.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663185|gb|ADE38286.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 294

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 88/198 (44%), Gaps = 4/198 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD-IMQSIPILGFLTFTVVYFMNL 126
           T +   S + ISL    +     ++S       V I+  I +++P +  ++  ++ F  L
Sbjct: 90  TLIMTFSVVAISLTLGTLGGYALSRSGYRYAFWVLIIALIFRAMPHITLVSGYLLPFFQL 149

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                +G  +  + AI       M  S +Q   NIP+DL+E +     + +Q F Y+ +P
Sbjct: 150 NLYGYLGTTIVVMVAINQPFTLWMLHSFFQ---NIPKDLDESAMVDGCTRFQAFRYVIIP 206

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              PG++   + S    +     + +++  +    +P I S++  A +E +++  + A++
Sbjct: 207 VMWPGVITTGLFSFLLAYNDFALTGLLLSQENQTMVPKIASFLGSAQEEGNVMYAVSAVV 266

Query: 247 TMLGVIFLYDQLLFRPMI 264
           +    +F+      R ++
Sbjct: 267 SATAPLFILVMFFQRQIV 284



 Score = 38.8 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 74/194 (38%), Gaps = 6/194 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ-LLAAFPANVFFPLVVSCVSYY 444
           T+     ++ I+  +    G  +    +  +        +  A P      +    + ++
Sbjct: 90  TLIMTFSVVAISLTLGTLGGYALSRSGYRYAFWVLIIALIFRAMPHITL--VSGYLLPFF 147

Query: 445 HLNPNLWL---SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            LN   +L    ++M+   Q + L+ + +     P D  E A     T ++ +RY+I+P 
Sbjct: 148 QLNLYGYLGTTIVVMVAINQPFTLWMLHSFFQNIPKDLDESAMVDGCTRFQAFRYVIIPV 207

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           ++P  +T  + +   A+N   ++ +            + +++  + E+G+    V  V+ 
Sbjct: 208 MWPGVITTGLFSFLLAYNDFALTGLLLSQENQTMVPKIASFLGSAQEEGNVMYAVSAVVS 267

Query: 562 MCCFVLALNRFLWH 575
               +  L  F   
Sbjct: 268 ATAPLFILVMFFQR 281


>gi|308067589|ref|YP_003869194.1| glutamine ABC transporter permease [Paenibacillus polymyxa E681]
 gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
          Length = 482

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 90/233 (38%), Gaps = 22/233 (9%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL- 89
           I+   L    +   P +      I+  + SL +    T L  L +++++ +   V+  + 
Sbjct: 249 ILAKYLGESGKGVAPVETSRWGLISASLPSLIKGMGNTLLYTLVSLLVAFILGLVFGFMK 308

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI----GAELAAIFAIFTS 145
            + ++    +    +DI + IP+       + +F+     + +       +AA+  +  +
Sbjct: 309 VSHNKVFRGIATVFVDIFRGIPL-----IVLAFFIYFGIPQALDFKMPLFVAAVLTLSLN 363

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMS 201
               +T  +   + +I     E +RS  L        + +P +    +P  +  +++++ 
Sbjct: 364 AGAYVTEIIRGGIQSIDPGQMEAARSLGLPYRTAMLKIILPQAVKIMIPSFINQLVITLK 423

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
                   S + V+G   +   G    IA   +  D+  +  A++ ++ +  L
Sbjct: 424 DT------SILSVIGLVELTQSG-KIIIARTFQSFDIWLV-VAVMYLIVITVL 468



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 28/207 (13%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIW-IGFRPHISSKIQPFAQLLAAFPANVFF 434
           +  +I     T+   +V +++A I+ +  G   +            F  +    P     
Sbjct: 276 LPSLIKGMGNTLLYTLVSLLVAFILGLVFGFMKVSHNKVFRGIATVFVDIFRGIPL---- 331

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA--------GASAFPNDFKEVASSF 486
            +V++   Y+ +   L   + +       +  N  A        G  +      E A S 
Sbjct: 332 -IVLAFFIYFGIPQALDFKMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSL 390

Query: 487 HITGWRWWRYIILPGI----FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            +        IILP       P ++   +         S++      G + L  +G    
Sbjct: 391 GLPYRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVI------GLVELTQSG---K 441

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
           I  +    SF  + L V +M   V+ +
Sbjct: 442 IIIARTFQSFD-IWLVVAVMYLIVITV 467


>gi|229488645|ref|ZP_04382511.1| ABC quaternary amine transporter, permease component [Rhodococcus
           erythropolis SK121]
 gi|229324149|gb|EEN89904.1| ABC quaternary amine transporter, permease component [Rhodococcus
           erythropolis SK121]
          Length = 216

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 12/180 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               L  L  +VI L+       +A +SRRL   +V    ++ +IP L          + 
Sbjct: 18  GWHVLLSLIPLVIGLVVALPIGWVAYRSRRLHPYVVGTAGLLYTIPSLALF-----VLLP 72

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G  I   +  I A+    V  +   +  +L ++P +    + +     +Q    + +
Sbjct: 73  PILGTKILDPMNIIVALTVYTVALLVRVVADALDSVPPETVLAATAMGYRPYQTLLKVQL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P  +P +   + ++       VV++  +V    ++ +P IGS      + +    I+  +
Sbjct: 133 PVGVPVICAGLRVA-------VVSNVSLVSLGALLGIPQIGSLFTQGFQLRFYTPIIAGI 185



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 59/171 (34%), Gaps = 8/171 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++I  ++ +P+G        +   +   A LL   P+   F L+   +    L+P  
Sbjct: 25  LIPLVIGLVVALPIGWVAYRSRRLHPYVVGTAGLLYTIPSLALFVLLPPILGTKILDPMN 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L ++     +   V     + P +    A++     ++    + LP   P    G 
Sbjct: 85  IIVALTVYTVALLVRV-VADALDSVPPETVLAATAMGYRPYQTLLKVQLPVGVPVICAGL 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             A     +   +  +            +G+   +  +   +  ++ G+ +
Sbjct: 144 RVAVVSNVSLVSLGALLGIPQ-------IGSLFTQGFQLRFYTPIIAGIAL 187


>gi|42518716|ref|NP_964646.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583002|gb|AAS08612.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 296

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L           +            +      +   ++  ++ISL  
Sbjct: 20  IVVIILFGILGDILISGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A   K      ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ Q++  +P+   +   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFN--LPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           VS ++ I +  +   +  G+   S  ++ +   +YQ    V      +++ +V+ +II+ 
Sbjct: 18  VSIVVIILFGILGDILISGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISL 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I +  GI++         ++ I+   ++L++ P+ V   F  ++  V +      +  +
Sbjct: 78  PIALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGA 137

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L + F     +  N+       P   ++   +  ++ W+  R I+LP   P  +TG I +
Sbjct: 138 LALTFFNLPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 AGRIFG 203


>gi|332343905|gb|AEE57239.1| inner membrane ABC transporter permease YehW [Escherichia coli
           UMNK88]
          Length = 243

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 11/229 (4%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
              A+I S V +         GL  +      +G+    +  ++  C F
Sbjct: 183 IGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADCLF 231



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D L  R +   S 
Sbjct: 215 QGALLVALAAIIADCLFERLVQALSQ 240


>gi|315148022|gb|EFT92038.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
          Length = 172

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           + ++ R L   ++ + +I+Q++P L  L+  ++                 +  +F   + 
Sbjct: 1   MISRKRSLANWIIRLANIIQTVPALAMLSILMLGMGLGV--------NTVVVTVFLYSLL 52

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  + Y  +  + R++ +V +   ++  Q  + + +P S+  ++  +          +V
Sbjct: 53  PIIKNTYTGMIQVDRNILDVGKGMGMTKVQLLYMVELPLSVSVIMAGIR-------NALV 105

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
            +  I      +   G+G  I       D  +I+   
Sbjct: 106 VAIGITAIGAFVGAGGLGDIIIRGTNATDGASIILVG 142



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 11/151 (7%)

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            I  +  +++ I   A ++   PA     +++  +          + + +   +   I+ 
Sbjct: 1   MISRKRSLANWIIRLANIIQTVPALAMLSILMLGMGLGVNT----VVVTVFLYSLLPIIK 56

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N   G      +  +V     +T  +    + LP      + G   A   A   + +   
Sbjct: 57  NTYTGMIQVDRNILDVGKGMGMTKVQLLYMVELPLSVSVIMAGIRNALVVAIGITAIGAF 116

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
              G       GLG  I   T       ++L
Sbjct: 117 VGAG-------GLGDIIIRGTNATDGASIIL 140


>gi|294632644|ref|ZP_06711204.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           e14]
 gi|292835977|gb|EFF94326.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           e14]
          Length = 224

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
            H L Q+ + T + +  + +I+L    V   L     + G + V I ++ +++P      
Sbjct: 24  AHRLLQHLALTVVCLAVSCLIALPVALVLGHLG----KGGALAVNISNVGRAVPTFA--- 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V+  + L P    G E   + A+    V  +  + Y  +  + RD+ + +R   ++G 
Sbjct: 77  --VLVLLLLTPVGRWG-EGPTVVALVLFAVPPLLTNAYVGMRGVDRDVVQAARGMGMTGR 133

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q  + + +P ++P ++  + ++
Sbjct: 134 QLLFRVELPLALPMVLTGVRIA 155



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 2/152 (1%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           +  ++ +   +     +       +   VV + ++ +I +PV + +G      +     +
Sbjct: 7   AWAWLTDPAHWTGDDGIAHRLLQHLALTVVCLAVSCLIALPVALVLGHLGKGGALAVNIS 66

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            +  A P      +++             +  L++F     +L N   G      D  + 
Sbjct: 67  NVGRAVPTFAVL-VLLLLTPVGRWGEGPTVVALVLF-AVPPLLTNAYVGMRGVDRDVVQA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           A    +TG +    + LP   P  +TG   A 
Sbjct: 125 ARGMGMTGRQLLFRVELPLALPMVLTGVRIAA 156


>gi|154250852|ref|YP_001411676.1| phosphate ABC transporter inner membrane subunit PstA [Parvibaculum
           lavamentivorans DS-1]
 gi|154154802|gb|ABS62019.1| phosphate ABC transporter, inner membrane subunit PstA
           [Parvibaculum lavamentivorans DS-1]
          Length = 430

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             A++I  L +F     AA        K+R    ++   ++ + ++P + F    +  F+
Sbjct: 216 FYALLICFLISFPVGISAAVYLEEFAPKNRW-TDLIEVNINNLAAVPSIVFGLLGLAVFL 274

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A +     +    +  +  +   +L  +P  + E +     S  Q   +  
Sbjct: 275 NFF-GMPRSAPIVGGLVLSLMTLPTIIIATRAALKAVPPSIREAAIGVGASKMQTVAHHV 333

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 334 LPLAMPGILTGTIIGLAQA 352



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 84/258 (32%), Gaps = 24/258 (9%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
           L  +QR      I W+  +          + G + N  +    L  +W   +  F     
Sbjct: 162 LPRDQRRISDDQIGWYDRLVEQDRISTPFNWGLLTNADSRFPELAGLWGALVGSF---YA 218

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++I  +I  PVGI               +  I+     LAA P+ VF  L ++    +  
Sbjct: 219 LLICFLISFPVGISAAVYLEEFAPKNRWTDLIEVNINNLAAVPSIVFGLLGLAVFLNFFG 278

Query: 447 NPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            P        L++   T   I+    A   A P   +E A     +  +   + +LP   
Sbjct: 279 MPRSAPIVGGLVLSLMTLPTIIIATRAALKAVPPSIREAAIGVGASKMQTVAHHVLPLAM 338

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA----------YIA-ESTEKGSF 552
           P  +TG I     A   +    +                         YI  +S E+G  
Sbjct: 339 PGILTGTIIGLAQALGETAPLLLIGMNAFITAAPDSMFNPSTALPTQIYIWADSPERGFT 398

Query: 553 PEVVLGVLIMCCFVLALN 570
                 ++++  F++ +N
Sbjct: 399 SRTSAAIVVLLGFLVCMN 416


>gi|23464683|ref|NP_695286.1| sugar permease of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|322689620|ref|YP_004209354.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|23325246|gb|AAN23922.1| sugar permease of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|320460956|dbj|BAJ71576.1| sugar ABC transporter permease component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 271

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 4/152 (2%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  ++V+S++  F   T     R  G   + +  +   +   G +   ++Y       K 
Sbjct: 74  MHLSIVLSIIVAFFACTALTLYRFRGRKPIMVFVLAIQMTSGGIIPQIIIYNQLGLLNKY 133

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G  LA I  +    +WNM         NIP+D+ E +     + WQ  W +  P + PG
Sbjct: 134 SGLILAYIAMVLPFAIWNM----RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPG 189

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +V   + +    W   + +   +   +   LP
Sbjct: 190 IVSTSVFAFINAWNDYMIAHTFMKDQSKYTLP 221



 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 70/264 (26%), Gaps = 13/264 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                      +R    +    FCVV    +   W  I  +      
Sbjct: 7   PRAVSHGAAQSAPPRRRTNPGKIARRAGTTILALLFCVVWFFPVY--WMIITAVKPRDEI 64

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV- 432
                V W   ++       I+++ I+       +        K  P    + A      
Sbjct: 65  MTTTPVFWPMHLS-------IVLSIIVAFFACTALTLYRFRGRK--PIMVFVLAIQMTSG 115

Query: 433 -FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P ++       LN    L L  I     + ++N+       P D  E A+      W
Sbjct: 116 GIIPQIIIYNQLGLLNKYSGLILAYIAMVLPFAIWNMRGFFLNIPKDIFESAAVEGANDW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    I  P   P  V+ ++ A   AWN  +++                +  +  T    
Sbjct: 176 QILWKITFPLAAPGIVSTSVFAFINAWNDYMIAHTFMKDQSKYTLPVWLSSFSTPTMGTD 235

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           F   +   +     V+     +  
Sbjct: 236 FGGQMAASVTFSLPVVVFFMLIQR 259


>gi|83942410|ref|ZP_00954871.1| probable ferric iron transport system permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846503|gb|EAP84379.1| probable ferric iron transport system permease protein
           [Sulfitobacter sp. EE-36]
          Length = 567

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 123/431 (28%), Gaps = 49/431 (11%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  ++   L  IP+++ E +R     G + +W + +P ++P L     ++          
Sbjct: 163 IFLTLRAGLRAIPQEVVEAARISGARGLRTWWQVVMPLTLPSLAAGTAITFVTALGNFGI 222

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             M+ +      LP +       +    L  +  ++L ML        +L +       +
Sbjct: 223 PAMLGIPAGYATLPTLVYQKLAGMGTSVLAEV--SILAMLIGAVAVTGILTQRFFQSRQR 280

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
             L                                    +    + L   LG  R     
Sbjct: 281 VYL------------------------------------VGATSRPLAIPLGAARLPVEV 304

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
               +     V  M  +    +V    + +   ++                     +   
Sbjct: 305 LLWAVVCTILVLPMFGLLATSLVPAYGVPLRLDTVTLQAWTEVLLRQPVTTRAFANSFGL 364

Query: 390 VVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            +   ++  ++ +P+   +   P  +S        L  A P  V    ++  +       
Sbjct: 365 AIGAAVVLMLLCLPLAWLMERNPTRLSRLFDSLLDLPYALPGVVLSIAMILLLIKLPFTD 424

Query: 449 N-----LWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                 +W+  L      + ++F  V A          E A S   + ++  R +I+P  
Sbjct: 425 ATLYGTIWIIFLAYLARFFAVMFRPVQASLKQLEPAMGEAAQSVGASLFQRLRDVIVPLS 484

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P    GAI     A+N   VS +            LG  I    + G         + +
Sbjct: 485 APAAAAGAILVFLTAFNELTVSALLWSSGTET----LGVVIFNLDDSGETAMASALAMTI 540

Query: 563 CCFVLALNRFL 573
              V+AL   +
Sbjct: 541 VLVVMALMVLV 551



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 4/199 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +    + A V+ +L     A L  ++  RL  +   +LD+  ++P +      ++  + L
Sbjct: 361 SFGLAIGAAVVLMLLCLPLAWLMERNPTRLSRLFDSLLDLPYALPGVVLSIAMILLLIKL 420

Query: 127 -YPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +   +  IF  + ++ + + F  +  SL  +   + E ++S   S +Q+   + 
Sbjct: 421 PFTDATLYGTIWIIFLAYLARFFAVMFRPVQASLKQLEPAMGEAAQSVGASLFQRLRDVI 480

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           VP S P      ++     +  +  S  ++       L  +   +  + +     A+   
Sbjct: 481 VPLSAPAAAAGAILVFLTAFNELTVS-ALLWSSGTETLGVVIFNLDDSGETAMASALAMT 539

Query: 245 MLTMLGVIFLYDQLLFRPM 263
           ++ ++  + +  QL+ R  
Sbjct: 540 IVLVVMALMVLVQLMSRRF 558



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 36/122 (29%), Gaps = 2/122 (1%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I   + AG  A P +  E A      G R W  +++P   P    G       A     +
Sbjct: 163 IFLTLRAGLRAIPQEVVEAARISGARGLRTWWQVVMPLTLPSLAAGTAITFVTALGNFGI 222

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583
             +      +     L     +    G+     + +L M    +A+   L    +    R
Sbjct: 223 PAMLGIPAGYATLPTLVY--QKLAGMGTSVLAEVSILAMLIGAVAVTGILTQRFFQSRQR 280

Query: 584 CL 585
             
Sbjct: 281 VY 282


>gi|209966523|ref|YP_002299438.1| phosphate ABC transporter, permease protein PstA, putative
           [Rhodospirillum centenum SW]
 gi|209959989|gb|ACJ00626.1| phosphate ABC transporter, permease protein PstA, putative
           [Rhodospirillum centenum SW]
          Length = 437

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++++L      A      A       ++   ++ + ++P + F    +  F+
Sbjct: 222 SLYLLIVTVLLALPIGVATAVYMEEFAPKNSFTDLIEVNINNLAAVPSIVFGLLGLAVFL 281

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             + G    A L     I    +  +  +   +L  +P  + E +     S  Q   +  
Sbjct: 282 GFF-GLPRSAPLVGGMVIALMSLPTIIIAARAALKAVPPSIREAALGMGASRLQTVMHHV 340

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   +++++  
Sbjct: 341 LPLAMPGILTGTIIALAQA 359



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 143/388 (36%), Gaps = 33/388 (8%)

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           VA  M+VV    I   G+G++   AI+ +  L          G    +D+  F+ ++  +
Sbjct: 44  VACLMLVVLLYTILHNGVGAFTQTAIRLEVTLDAKTIDPKGTGNPADWDRAAFQDLVQDA 103

Query: 268 NKFRLERTTGIYPADSWV--------LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319
                   +G  P  +          ++L+R+      +   +  F+ P S+++ ++ + 
Sbjct: 104 LYREFPDVSGRVPKRALRGLISPVAGVFLYREVLEDPAMVGQTREFWLPASDDINQIRK- 162

Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
            G I    PE+   +   Q        +   +V        + S  +  +   Y ++  +
Sbjct: 163 -GRIDRTLPESSRPVSDEQLA------WLDRLVEQGKATSVFNSTFFTASDSNYPELAGI 215

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPL 436
                 +++ ++V +++A  I +   +++      +S           LAA P+ VF  L
Sbjct: 216 RGAVVGSLYLLIVTVLLALPIGVATAVYMEEFAPKNSFTDLIEVNINNLAAVPSIVFGLL 275

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L   +++   +   I+    A   A P   +E A     +  + 
Sbjct: 276 GLAVFLGFFGLPRSAPLVGGMVIALMSLPTIIIAARAALKAVPPSIREAALGMGASRLQT 335

Query: 494 WRYIILPGIFPYYVTGAITACGGAW----------NASIVSEVASWGHIHLRTTGLGAYI 543
             + +LP   P  +TG I A   A             + V+E  S          +  YI
Sbjct: 336 VMHHVLPLAMPGILTGTIIALAQALGETAPLLMVGMNAFVTEPPSGLLSSSSVLPVQVYI 395

Query: 544 A-ESTEKGSFPEVVLGVLIMCCFVLALN 570
             ++ E+G        ++++  F++ +N
Sbjct: 396 WADAPERGFVELTSAAIMVLLAFLIMMN 423


>gi|42560775|ref|NP_975226.1| spermidine/putrescine ABC transporter permease component
           [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492271|emb|CAE76868.1| spermidine/putrescine ABC transporter permease component
           [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301320823|gb|ADK69466.1| ABC transporter, permease protein [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 330

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLP 62
           F   +++P +   +  ++++ I+ ++   I     P D + +  I+ +        + + 
Sbjct: 57  FSKDKVWPILAPFILVMVILVILPLVSILIYAFIQPADGITLFKISFEKFAKLFTSNGIL 116

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
                + L  + A ++ +L  +  A + A+ +    +L   + ++ ++P+   +   V+ 
Sbjct: 117 YSLFLSILYAIVAGMLCVLIGYPIALMMAQMKS--KILARNMWVIVTMPMWISMLLKVLG 174

Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
              L+       IG  +A I  +    +      +Y SL +   DLEE +     S ++ 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +  S+PG++    + +      ++    +  G   +    I SY      +    
Sbjct: 235 FWSITLRSSIPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQG-NDFGYG 293

Query: 240 AILYAMLTMLGVIFLY 255
           A +  +L +L    + 
Sbjct: 294 AAVSVVLAILVFGLML 309



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 7/197 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +++   +++   +V  ++  +I  P+ + +            +  +      ++   ++ 
Sbjct: 115 ILYSLFLSILYAIVAGMLCVLIGYPIALMMAQMKSKILARNMWVIVTMPMWISMLLKVLG 174

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG-----ASAFPNDFKEVASSFHITGWRW 493
               +Y L      + + I     Y+              +   D +E A     + +R 
Sbjct: 175 LQTLFYLLADFAIGTPIAIIIGMTYMFLPFAIAPIYDSLESRQTDLEEAALDLGASKFRT 234

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GS 551
           +  I L    P  +T        A  + IV      G I+L +  + +Y  +  +   G+
Sbjct: 235 FWSITLRSSIPGVLTAFSLVLVQAATSLIVVHYMGGGRIYLVSAAIESYFFQGNDFGYGA 294

Query: 552 FPEVVLGVLIMCCFVLA 568
              VVL +L+    ++ 
Sbjct: 295 AVSVVLAILVFGLMLVM 311


>gi|323359370|ref|YP_004225766.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Microbacterium testaceum StLB037]
 gi|323275741|dbj|BAJ75886.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 317

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 20/187 (10%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           IL P    R  P+++D++A                  + P    D  P+ L V    Q A
Sbjct: 68  ILLPRTHDRAMPHVWDMIA----------------RMSAPTSGGDTPPLILSVA---QAA 108

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
             T        +I ++   +      + R +   L+P + + Q +P++ F          
Sbjct: 109 GTTLGLAALGWLIGVVVGSLLGIAMQRWRLVEAGLLPWIVVSQIVPLIAFAPVVNALGTQ 168

Query: 126 LYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +        +  ++  I      + +   M + L        ++ RS     WQ   +L 
Sbjct: 169 IDRSGFPWPQWFSVALIASYLAFFPVAVGMLRGLDAPDALHLDLMRSSSAGWWQTLVHLR 228

Query: 185 VPFSMPG 191
           +P ++P 
Sbjct: 229 LPAAVPH 235



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 5/139 (3%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431
           T   +L V      T+    +  +I  ++   +GI +     + + + P+  +    P  
Sbjct: 97  TPPLILSVAQAAGTTLGLAALGWLIGVVVGSLLGIAMQRWRLVEAGLLPWIVVSQIVPLI 156

Query: 432 VFFPLVVSCVSYYHLNPNLW-----LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            F P+V +  +    +   W     ++L+  +   + +   ++ G  A      ++  S 
Sbjct: 157 AFAPVVNALGTQIDRSGFPWPQWFSVALIASYLAFFPVAVGMLRGLDAPDALHLDLMRSS 216

Query: 487 HITGWRWWRYIILPGIFPY 505
               W+   ++ LP   P+
Sbjct: 217 SAGWWQTLVHLRLPAAVPH 235


>gi|226349693|ref|YP_002776807.1| putative phosphate ABC transporter permease protein [Rhodococcus
           opacus B4]
 gi|226245608|dbj|BAH55955.1| putative phosphate ABC transporter permease protein [Rhodococcus
           opacus B4]
          Length = 303

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 72/186 (38%), Gaps = 5/186 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    L   +  I++ G+              +  +   +      T   ML  +++++ 
Sbjct: 41  LSCLFLFAVLAVIIVEGLARFDWNLISQQPSRLHPETSGVQSAIFGTLWVMLGTIILAIP 100

Query: 82  FTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
                A      A  ++    ++   +  + ++P + +   T+  F+   P  +    LA
Sbjct: 101 IGIAGAVYLEEYADSTKWWNRLIELNIQNLVAVPTIIYGILTLA-FVVRGPISLGPVVLA 159

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
              A+    +  +  +  ++L ++PRD+ + S +   + WQ  W   +P ++ G+    +
Sbjct: 160 GSVALALLILPVIIITTREALRSVPRDIRDASLALGATLWQTTWKQVLPSAISGIATGTI 219

Query: 198 MSMSGG 203
           +++S  
Sbjct: 220 LALSRA 225



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 65/213 (30%), Gaps = 11/213 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
           L + L   +               V   L   +   V  V I        + +       
Sbjct: 13  LGKVLVTGKRRNRTRSAVFAGILWVCLALSCLFLFAVLAVIIVEGLARFDWNLISQQPSR 72

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAA 427
           +          +F  + +++   I+ IP+GI                +  I+   Q L A
Sbjct: 73  LHPETSGVQSAIFGTLWVMLGTIILAIPIGIAGAVYLEEYADSTKWWNRLIELNIQNLVA 132

Query: 428 FPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            P  ++  L ++ V    ++     L  S+ +       I+        + P D ++ + 
Sbjct: 133 VPTIIYGILTLAFVVRGPISLGPVVLAGSVALALLILPVIIITTREALRSVPRDIRDASL 192

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +   T W+     +LP       TG I A   A
Sbjct: 193 ALGATLWQTTWKQVLPSAISGIATGTILALSRA 225


>gi|218690276|ref|YP_002398488.1| putative ABC transporter permease [Escherichia coli ED1a]
 gi|218427840|emb|CAR08754.2| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli ED1a]
 gi|315299366|gb|EFU58618.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 243

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +    + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLHKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
             +  
Sbjct: 236 QAFSQ 240



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLHK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQAFSQ 240


>gi|158425316|ref|YP_001526608.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158332205|dbj|BAF89690.1| putative ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 224

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L +   +T   +  A  I  L         A SR   +   P L+          +S P 
Sbjct: 13  LIEATKQTLYMVAVAGFIGTLIGLPLGVFLATSRSGELFAAPWLNHILGLVVNAARSTP- 71

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AAI  +  +    +   +  S+  + + L E +R+ 
Sbjct: 72  FIILVVAIIPFTRLIAGTSIGTN-AAIVPLTVAAAPFIARLIEASIREVDQGLVEAARAM 130

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++P +   + +++
Sbjct: 131 GATPLQIVRKVLLPEALPSITLALTLAV 158



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V   I ++I +P+G+++           P ++  +        + P  +    +
Sbjct: 20  TLYMVAVAGFIGTLIGLPLGVFLATSRSGELFAAPWLNHILGLVVNAARSTPFIILVVAI 79

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     ++   +  N  +  L +    + I   + A          E A +   T  +  
Sbjct: 80  IPFTRLIAGTSIGTNAAIVPLTVAAAPF-IARLIEASIREVDQGLVEAARAMGATPLQIV 138

Query: 495 RYIILPGIFPYYVTGAITAC 514
           R ++LP   P        A 
Sbjct: 139 RKVLLPEALPSITLALTLAV 158


>gi|319441562|ref|ZP_07990718.1| glutamate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 313

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 95/269 (35%), Gaps = 26/269 (9%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           +      R +  N    +   L +  +   +          D  D   I     S   Y 
Sbjct: 8   LYDAPGPRAVRINRILTVIVSLALIALLASVLWALGNKGQLD-GDKWNIFTKGSSWTTYI 66

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGFLTFTV 120
                  + A V+S++   +   +         R +  +   I+++ +SIP+L  + F  
Sbjct: 67  IPGLWATVKAAVLSIILALIVGAVLGIGRLSTHRSIRWICSIIVEVFRSIPVLVLMLFAY 126

Query: 121 VYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             F    L+P   +G   A +F +       +  ++   + ++P+   E + +  LS  Q
Sbjct: 127 TIFGEWGLFPSTQLG-FAAVVFGLTMYNGSVIAETLRSGIESLPKGQSEAAYALGLSWGQ 185

Query: 179 KFWYLGVPFS----MPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
               + +P +    MP +V  M++++  S   + +   E++  G  +    G        
Sbjct: 186 TMRKILLPQAVAAMMPAIVSQMVIALKDSALGYMIGFVEVVRSGRQLGEYYG-------- 237

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
                L ++L     M+ + F   +L  R
Sbjct: 238 ---SILPSLLVVAAIMIIINFGLTRLAER 263



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 91/268 (33%), Gaps = 24/268 (8%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG--------YIVNHFTYQDVLYVIWLGC 384
                 R++ +L +     +  +   + W            + +         Y+I    
Sbjct: 12  PGPRAVRINRILTVIVSLALIALLASVLWALGNKGQLDGDKWNIFTKGSSWTTYIIPGLW 71

Query: 385 ITMFRVVVLIIIASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            T+   V+ II+A I+   +GI  +     I        ++  + P  V      +    
Sbjct: 72  ATVKAAVLSIILALIVGAVLGIGRLSTHRSIRWICSIIVEVFRSIPVLVLMLFAYTIFGE 131

Query: 444 YHLNPNLWLSLL-MIFGTQWY----ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
           + L P+  L    ++FG   Y    I   + +G  + P    E A +  ++  +  R I+
Sbjct: 132 WGLFPSTQLGFAAVVFGLTMYNGSVIAETLRSGIESLPKGQSEAAYALGLSWGQTMRKIL 191

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP      +   ++    A   S +  +  +  +      LG Y         +  ++  
Sbjct: 192 LPQAVAAMMPAIVSQMVIALKDSALGYMIGFVEVVRSGRQLGEY---------YGSILPS 242

Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           +L++   ++ +N F    L     R LR
Sbjct: 243 LLVVAAIMIIIN-FGLTRLAERIERQLR 269


>gi|294678044|ref|YP_003578659.1| pyrimidine ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294476864|gb|ADE86252.1| pyrimidine ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 282

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 15/204 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              + D +  I  G ++        +I     I V I +   P +   + P    +AA P
Sbjct: 77  PLLWGDFVQTILKGALS------GYLIGCGAAILVAIAVDRSPFLQRGLLPVGNFVAALP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F        N++AG +A     +++ +++  +
Sbjct: 131 IVGIAPILVMWFGFDWQSKAAVVVVMVFFPVL----VNMVAGLAATDALSRDLMATWSAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    + LP   P+   G   A   A   +IV+E          T G+G  I+ S  +
Sbjct: 187 YGQSLIKMRLPAALPFLFNGLKIATTLALIGAIVAEFFGS-----PTRGMGFRISTSVGQ 241

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
                V   + +       L   +
Sbjct: 242 LDLALVWAEIAVAALAGSGLFGLI 265



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 94/240 (39%), Gaps = 17/240 (7%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR- 71
           R +   +F +   VL  G++  L         P DI   +   L +  L     +T L+ 
Sbjct: 33  RALVATLFGVTLLVLWQGLVRGLDVSPVILPAPSDIAAAIVGNLPL--LWGDFVQTILKG 90

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            LS  +I      + A    +S  L   L+P+ + + ++PI+G     V++F   +  K 
Sbjct: 91  ALSGYLIGCGAAILVAIAVDRSPFLQRGLLPVGNFVAALPIVGIAPILVMWFGFDWQSKA 150

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +   F +          +M   L        ++  ++  S  Q    + +P ++P 
Sbjct: 151 AVVVVMVFFPV--------LVNMVAGLAATDALSRDLMATWSASYGQSLIKMRLPAALPF 202

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L   + ++ +      + +E         P  G+G  I+ ++ + DL A+++A + +  +
Sbjct: 203 LFNGLKIATTLALIGAIVAEFFGS-----PTRGMGFRISTSVGQLDL-ALVWAEIAVAAL 256


>gi|315283627|ref|ZP_07871767.1| phosphate ABC transporter, permease protein PstA [Listeria marthii
           FSL S4-120]
 gi|313612732|gb|EFR86734.1| phosphate ABC transporter, permease protein PstA [Listeria marthii
           FSL S4-120]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 84/215 (39%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A ++V+ +  +L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVLIVVILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLIITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPIL 219



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 74/208 (35%), Gaps = 25/208 (12%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCI 385
           + + +  +++  +      ++  +  G+    +   V   ++                  
Sbjct: 1   MNVKTKDKIATGVFYAIAVLIVVILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGP 60

Query: 386 TMFRVVVLIIIASIIWIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVV 438
            ++    ++II  +I +P+    GI++      +          ++L++ P+     +VV
Sbjct: 61  EIWNSFYMLIITMLISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVV 115

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGW 491
               +      +  S  +I G     +FN       V    +A PN  +E   +  ++ W
Sbjct: 116 GLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALNAIPNTQREAGLALGLSRW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
                +++P   P  +TG I A G  + 
Sbjct: 176 ETITRVLVPAALPAIITGVILAAGRVFG 203


>gi|312144336|ref|YP_003995782.1| phosphate ABC transporter, inner membrane subunit PstC
           [Halanaerobium sp. 'sapolanicus']
 gi|311904987|gb|ADQ15428.1| phosphate ABC transporter, inner membrane subunit PstC
           [Halanaerobium sp. 'sapolanicus']
          Length = 292

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 14/196 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMV 77
           L+  +++IGI  ILL             +             ++        +  L    
Sbjct: 19  LVVVIVLIGIFYILLSNSIPAFREIGFQEFFTSKRWNPTSFSNIEYGILSQVVSTLMVTF 78

Query: 78  ISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127
            +++         A       + ++ ++L P+++I+  IP  ++GFL   ++       +
Sbjct: 79  GAMIIAVPLGIATAAYLSEIANPKVKVILKPVIEILAGIPSVVIGFLGIVLLGPLIARTF 138

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                   L     +    +  +      ++  +P+  +  S +   + WQ    + +P 
Sbjct: 139 NLSNGLNALNGSILLAVMSLPTIISLSEDAIAAVPKSYKNASLALGANRWQTLIKVTIPS 198

Query: 188 SMPGLVWNMMMSMSGG 203
           ++ G+   +M+ M   
Sbjct: 199 ALSGITAAVMLGMGRA 214



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFA 422
           N  ++ ++ Y I    ++   V      A II +P+GI           P +   ++P  
Sbjct: 55  NPTSFSNIEYGILSQVVSTLMVTFG---AMIIAVPLGIATAAYLSEIANPKVKVILKPVI 111

Query: 423 QLLAAFPANV--------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++LA  P+ V          PL+    +  +    L  S+L+   +   I+       +A
Sbjct: 112 EILAGIPSVVIGFLGIVLLGPLIARTFNLSNGLNALNGSILLAVMSLPTIISLSEDAIAA 171

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P  +K  + +     W+    + +P          +   G A   ++   +A+     +
Sbjct: 172 VPKSYKNASLALGANRWQTLIKVTIPSALSGITAAVMLGMGRAIGETMTVLMATGNAPRM 231

Query: 535 RT 536
            +
Sbjct: 232 PS 233


>gi|255022347|ref|ZP_05294333.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes FSL J1-208]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 84/215 (39%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A ++VI +  +L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVLIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLVITMIISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPIL 219



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + +    ++ G+   I  + +  +   F  T              ++    +++I  II
Sbjct: 16  AIAVLIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFYMLVITMII 75

Query: 401 WIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++      +          ++L++ P+     +VV    +      +  S
Sbjct: 76  SVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVVGLFGFLVFVIQMGWS 130

Query: 454 LLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +I G     +FN       V    +A PN  +E   +  ++ W     +++P   P  
Sbjct: 131 FSVISGALTLTIFNLPLLIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPAALPAI 190

Query: 507 VTGAITACGGAWN 519
           +TG I A G  + 
Sbjct: 191 ITGVILAAGRVFG 203


>gi|302874730|ref|YP_003843363.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           cellulovorans 743B]
 gi|307690656|ref|ZP_07633102.1| phosphate ABC transporter, permease protein PstC [Clostridium
           cellulovorans 743B]
 gi|302577587|gb|ADL51599.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           cellulovorans 743B]
          Length = 308

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 5/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSIPILGFLTFTVVY--- 122
           + L  + A+++S       A       +     ++   L++   IP + +    ++Y   
Sbjct: 91  SALVSIGAVILSAPIAVAVAIFLNHISKGYGKKLIQASLELFVGIPSVVYGLLGILYLVP 150

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+         + LA I  +    +  +      ++  +P +  E S     + WQ    
Sbjct: 151 FIKNVTSGTGFSLLAGIIVLSIMILPTIASLAADAIKIVPHEYIEASYGLGATRWQTIKK 210

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           + +P +  G+   +++ ++  +   +A +M++     IP
Sbjct: 211 VVLPAASNGIFTGIVLGLARAFGEALAVQMVIGNTIKIP 249



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 67/172 (38%), Gaps = 9/172 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +  V++++    +++  V++   IA  + I +      + +    IQ   +L    P+ V
Sbjct: 82  FGAVIFIVGSALVSIGAVILSAPIAVAVAIFLNHI--SKGYGKKLIQASLELFVGIPSVV 139

Query: 433 FFPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASS 485
           +  L +  +  +          +L   ++++       + ++ A      P+++ E +  
Sbjct: 140 YGLLGILYLVPFIKNVTSGTGFSLLAGIIVLSIMILPTIASLAADAIKIVPHEYIEASYG 199

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              T W+  + ++LP       TG +     A+  ++  ++     I +  +
Sbjct: 200 LGATRWQTIKKVVLPAASNGIFTGIVLGLARAFGEALAVQMVIGNTIKIPDS 251


>gi|237712827|ref|ZP_04543308.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408816|ref|ZP_06085361.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_22]
 gi|294648190|ref|ZP_06725730.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           ovatus SD CC 2a]
 gi|294810768|ref|ZP_06769416.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229447155|gb|EEO52946.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353027|gb|EEZ02122.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_22]
 gi|292636465|gb|EFF54943.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           ovatus SD CC 2a]
 gi|294442101|gb|EFG10920.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 291

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S++I   IF LL+  +V+ +  IL   + +                 +    +      T
Sbjct: 13  SQKIAFGIFRLLSLCIVLILFAILGFIVYKGIGAISWNFITSAPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPIGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   V  GI   S  +I +  T       IW   + T + +V   + A  I 
Sbjct: 28  IVLILFAILGFIVYKGIGAISWNFITSAPTDGMTGGGIWPAIVGTFYLMVGSALFAFPIG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        +   I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|254480369|ref|ZP_05093616.1| phosphate ABC transporter, permease protein PstA [marine gamma
           proteobacterium HTCC2148]
 gi|214038952|gb|EEB79612.1| phosphate ABC transporter, permease protein PstA [marine gamma
           proteobacterium HTCC2148]
          Length = 428

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 8/159 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  ++++    F     AA          RL  ++   ++ + ++P + F    +  F+N
Sbjct: 215 LFTLMVTFALAFPIGVFAAVYLEEFAPRNRLTDLIEININNLAAVPSIVFGLLGLAVFIN 274

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        +  I       +  +  +   ++  +   + E +     S  Q  ++  +
Sbjct: 275 FFELPRSAPLVGGIVLSL-MTLPTIIITSRAAIQAVSPSIREAALGVGASKLQTVFHHVL 333

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           P +MPG++   ++ M+          MI +   ++ +PG
Sbjct: 334 PVAMPGILTGSIIGMAQALGESAPLLMIGMVAFIMDVPG 372



 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 19/205 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           ++F ++V   +A  I +   +++     R  ++  I+     LAA P+ VF  L ++   
Sbjct: 214 SLFTLMVTFALAFPIGVFAAVYLEEFAPRNRLTDLIEININNLAAVPSIVFGLLGLAVFI 273

Query: 443 YYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +   P    L   +++   T   I+    A   A     +E A     +  +   + +L
Sbjct: 274 NFFELPRSAPLVGGIVLSLMTLPTIIITSRAAIQAVSPSIREAALGVGASKLQTVFHHVL 333

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG------------AYIAEST 547
           P   P  +TG+I     A   S    +       +   G G               A+S 
Sbjct: 334 PVAMPGILTGSIIGMAQALGESAPLLMIGMVAFIMDVPG-GVTDSSTVLPVQIYLWADSP 392

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
           E+G   +    ++++  F++ +N  
Sbjct: 393 ERGFTEKTSAAIMVLMGFLILMNAL 417


>gi|187918089|ref|YP_001883652.1| phosphate transport system permease protein PstC [Borrelia hermsii
           DAH]
 gi|119860937|gb|AAX16732.1| phosphate transport system permease protein PstC [Borrelia hermsii
           DAH]
          Length = 302

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 66/163 (40%), Gaps = 10/163 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +L A+ I L F      L+ +++      L  I++++  IP + +  F   + 
Sbjct: 82  ALTTFFSVLIALPIGLGFAI---YLSERTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFI 138

Query: 124 MNLYPGKV-----IGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
             L          +G  L     + +  +     S+ Y SL  +P+  +  S +   + W
Sbjct: 139 ATLVKNTFRREDNLGHNLITSVIVLSIMILPTIISVSYTSLKAVPKSYKLASLALAATDW 198

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           Q  + + +P +  G++  +++++       +A  M+  G  + 
Sbjct: 199 QTIYKVMIPSAGKGILAGVILAIGRAIGETIAVLMVGGGSPLF 241



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 16/157 (10%)

Query: 391 VVLIIIASIIWIP--VGIWIGFRPH----ISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +    + +I +P  +G  I             +Q   +LLA  P+ V+     + ++  
Sbjct: 82  ALTTFFSVLIALPIGLGFAIYLSERTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFIATL 141

Query: 445 ---------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWW 494
                    +L  NL  S++++       + +V      A P  +K  + +   T W+  
Sbjct: 142 VKNTFRREDNLGHNLITSVIVLSIMILPTIISVSYTSLKAVPKSYKLASLALAATDWQTI 201

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +++P      + G I A G A   +I   +   G 
Sbjct: 202 YKVMIPSAGKGILAGVILAIGRAIGETIAVLMVGGGS 238


>gi|126731221|ref|ZP_01747028.1| phosphate ABC transporter, permease protein [Sagittula stellata
           E-37]
 gi|126708132|gb|EBA07191.1| phosphate ABC transporter, permease protein [Sagittula stellata
           E-37]
          Length = 451

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 6/159 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPIL 104
            D      +   L      +   ML  + +SL      +      A ++R   ++ V I 
Sbjct: 212 ADASESRPEQAGLGVSMLGSFFMMLVVLALSLPIGVAASIYLEEFAPQNRWTDLIEVNIS 271

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + + ++P + F    +  F+  +      A L     +    +  +  S   SL ++P  
Sbjct: 272 N-LAAVPSIVFGILGLAVFIQ-FMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKSVPPS 329

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           + + +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 330 IRDAALGVGASKMQAVFHHVLPLAMPGILTGTIIGLAQA 368



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M     ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 225 GVSMLGSFFMMLVVLALSLPIGVAASIYLEEFAPQNRWTDLIEVNISNLAAVPSIVFGIL 284

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L   L++   T   I+ +  A   + P   ++ A     +  + 
Sbjct: 285 GLAVFIQFMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQA 344

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 345 VFHHVLPLAMPGILTGTIIGLAQA 368


>gi|194467575|ref|ZP_03073562.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
 gi|194454611|gb|EDX43508.1| binding-protein-dependent transport systems inner membrane
           component [Lactobacillus reuteri 100-23]
          Length = 212

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 13/160 (8%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R    L  ++        L +   +  +F  L P   +G + A I     S+   +  S 
Sbjct: 43  RREKWLNSLIYFF----SLLYSIPSFAFFALLLPISGLGMKTAIIVLTLYSEYV-LLRSF 97

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              +  +   L EV     ++  Q F  + +P ++P +   + ++++        +  I 
Sbjct: 98  ITGIRGVDPQLIEVGVGMGMTSRQVFRQIQLPLALPAIFSGIQVALASTMAMATIAATIN 157

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYA-MLTMLGVIF 253
            G       G+G  +   ++ Q ++ IL+  +LTM   + 
Sbjct: 158 AG-------GLGQLLFEGLQGQQVVPILWGTILTMALTLV 190



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           F  LL + P+  FF L++               +++   +++ +L + I G         
Sbjct: 54  FFSLLYSIPSFAFFALLLPISGLG----MKTAIIVLTLYSEYVLLRSFITGIRGVDPQLI 109

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EV     +T  + +R I LP   P   +G   A       + ++   + G       GLG
Sbjct: 110 EVGVGMGMTSRQVFRQIQLPLALPAIFSGIQVALASTMAMATIAATINAG-------GLG 162

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             + E  +      ++ G ++     L  
Sbjct: 163 QLLFEGLQGQQVVPILWGTILTMALTLVC 191


>gi|210631411|ref|ZP_03296887.1| hypothetical protein COLSTE_00772 [Collinsella stercoris DSM 13279]
 gi|210160042|gb|EEA91013.1| hypothetical protein COLSTE_00772 [Collinsella stercoris DSM 13279]
          Length = 362

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 82/216 (37%), Gaps = 6/216 (2%)

Query: 7   LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
               I+  +   I  L+  ++V  +  IL  G+     P  +            +     
Sbjct: 72  RMDRIATGVLTAIAGLVMLIVVSMVAYILYEGLSTLLTPGFLTQPSRANGAAGGVAYQLF 131

Query: 67  RTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            +   ++  ++IS+  +   A      A    +  +    ++ + S+P +    F  + F
Sbjct: 132 DSFYLLVITLLISVPVSLGAAVFLTEYAPEGPITHIASTAIETLSSLPSIVVGMFGFLVF 191

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +  K      A    +F   +  +   + Q+L ++P+   +   +  L+ W+   ++
Sbjct: 192 SVNFGWKYSIISGAVALTMFNIPI--LVRVIQQALEDVPQHQRDACLAMGLTRWEATVHV 249

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            +P +MP +V  +++S +G  F   A+ +   G + 
Sbjct: 250 LIPAAMPAIVTGVVLS-AGRVFGEAAALLFTSGMSS 284



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 12/182 (6%)

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYV---IWLGCITMFRVVVLIIIASIIWIPVGI 406
            +V  +   I ++ +  ++                     +F    L++I  +I +PV +
Sbjct: 90  LIVVSMVAYILYEGLSTLLTPGFLTQPSRANGAAGGVAYQLFDSFYLLVITLLISVPVSL 149

Query: 407 WIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
                    +   P   + + A       P +VV    +   + N      +I G     
Sbjct: 150 GAAVFLTEYAPEGPITHIASTAIETLSSLPSIVVGMFGFLVFSVNFGWKYSIISGAVALT 209

Query: 465 LFNVIAGAS-------AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +FN+              P   ++   +  +T W    ++++P   P  VTG + + G  
Sbjct: 210 MFNIPILVRVIQQALEDVPQHQRDACLAMGLTRWEATVHVLIPAAMPAIVTGVVLSAGRV 269

Query: 518 WN 519
           + 
Sbjct: 270 FG 271


>gi|149914853|ref|ZP_01903382.1| phosphate ABC transporter, permease protein [Roseobacter sp.
           AzwK-3b]
 gi|149811041|gb|EDM70878.1| phosphate ABC transporter, permease protein [Roseobacter sp.
           AzwK-3b]
          Length = 452

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 4/187 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
            D+    +V G++   +   +         D      +   L      +   ML  + +S
Sbjct: 184 IDVEHLDIVDGLVASGIVAKEFNLSFITGADASESRPEQAGLGVSILGSFFMMLVVLALS 243

Query: 80  LLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           L      +      A   R   ++   +  + ++P + F    +  F+  +      A L
Sbjct: 244 LPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGILGLAVFIQ-FAHLPQSAPL 302

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
                +    +  +  S   SL ++P  + + +     S  Q  ++  +P +MPG++   
Sbjct: 303 VGGLTLTLMTLPTIVISTRASLKSVPPSIRDAALGVGASKMQAVFHHVLPMAMPGILTGT 362

Query: 197 MMSMSGG 203
           ++ ++  
Sbjct: 363 IIGLAQA 369



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            +++     ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 226 GVSILGSFFMMLVVLALSLPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGIL 285

Query: 437 VVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P     +    +   T   I+ +  A   + P   ++ A     +  + 
Sbjct: 286 GLAVFIQFAHLPQSAPLVGGLTLTLMTLPTIVISTRASLKSVPPSIRDAALGVGASKMQA 345

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 346 VFHHVLPMAMPGILTGTIIGLAQA 369


>gi|238925302|ref|YP_002938819.1| phosphate ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|238876978|gb|ACR76685.1| phosphate ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|291524404|emb|CBK89991.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Eubacterium rectale DSM 17629]
          Length = 300

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 86/231 (37%), Gaps = 26/231 (11%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------QYASRTTLRM 72
           IF + A V +  +++I ++   +       V ++ +       P             L  
Sbjct: 14  IFTVCAVVAIFAVLSITIYMFLKGAPAFFKVGVLNLLFGTKWAPTAADPSYGILYIILTS 73

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY---- 122
           +    +S+L     A L A       +++L  V+ P ++++ +IP + +    ++     
Sbjct: 74  IIGTAVSILIGVPIALLTAVFLTEVSNKKLSAVVQPAVELLAAIPSVIYGLLGLMILNPV 133

Query: 123 --------FMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                   F N    +  G    LAAI  +    +  +      S+  +P+ +   S + 
Sbjct: 134 LYKLEKHIFANSATHQFTGGSNLLAAIIVLAIMILPTVINMSVSSIQAVPQQMRAASLAL 193

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             +  Q  + + VP +  G++  +++ +       +A  M+  G    PLP
Sbjct: 194 GATKIQTIFKVTVPAAKSGIMTGIVLGIGRALGEAMAINMVAGGTVSFPLP 244



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 74/219 (33%), Gaps = 24/219 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I  +  + G         +  +             +     +   ++   ++ +I +
Sbjct: 26  VLSITIYMFLKGAPAFFKVGVLNLLFGTKWAPTAADPSYGILYIILTSIIGTAVSILIGV 85

Query: 403 PVGIWIG------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-------------- 442
           P+ +             +S+ +QP  +LLAA P+ ++  L +  ++              
Sbjct: 86  PIALLTAVFLTEVSNKKLSAVVQPAVELLAAIPSVIYGLLGLMILNPVLYKLEKHIFANS 145

Query: 443 ---YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +    NL  +++++       + N+ ++   A P   +  + +   T  +    + 
Sbjct: 146 ATHQFTGGSNLLAAIIVLAIMILPTVINMSVSSIQAVPQQMRAASLALGATKIQTIFKVT 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +P      +TG +   G A   ++   + + G +     
Sbjct: 206 VPAAKSGIMTGIVLGIGRALGEAMAINMVAGGTVSFPLP 244


>gi|23396742|sp|Q9CK96|METI_PASMU RecName: Full=Probable D-methionine transport system permease
           protein metI
          Length = 217

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFL 116
              T      A + +++       LA          +RR   VL  I++I +S+P    L
Sbjct: 13  TLETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVIINIGRSVP-FIIL 71

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 72  LIILLPFTRLVVGTTLGTT-AAIVPLSVSAIPFFARLTANALLEIPSGLTEAAKSMGATN 130

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 131 WQIVTKYYLPESIPILINGITLTL 154



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 14/156 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFA 422
            T +    V      T++   +  + A +I +P+G+         I      +  +    
Sbjct: 1   MTPRIWELVGLSTLETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVII 60

Query: 423 QLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            +  + P      +  P     V          + L +     +  L          P+ 
Sbjct: 61  NIGRSVPFIILLIILLPFTRLVVGTTLGTTAAIVPLSVSAIPFFARL--TANALLEIPSG 118

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
             E A S   T W+      LP   P  + G     
Sbjct: 119 LTEAAKSMGATNWQIVTKYYLPESIPILINGITLTL 154


>gi|59712218|ref|YP_204994.1| phosphate ABC transporter, permease protein PstC [Vibrio fischeri
           ES114]
 gi|197334680|ref|YP_002156428.1| phosphate ABC transporter, permease protein PstC [Vibrio fischeri
           MJ11]
 gi|59480319|gb|AAW86106.1| phosphate ABC transporter, permease protein PstC [Vibrio fischeri
           ES114]
 gi|197316170|gb|ACH65617.1| phosphate ABC transporter, permease protein PstC [Vibrio fischeri
           MJ11]
          Length = 308

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 15/217 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RIF  +F   A + ++ +  I    I+E+        +  I L    LP  A      M+
Sbjct: 32  RIFHGLFLSCAVIGIVSLATIAYFIIKESIPAFQQAGVSGIVLGQDWLPP-ALYGVFTMI 90

Query: 74  SAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFT 119
            A ++S    +L       L A        +++  ++ P ++++  IP + +    L   
Sbjct: 91  VASIVSTFGAVLVGVPVGILTAIFIAEIAPKQVADIIRPAVELLAGIPSVVYGFFGLVII 150

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V    +++        LA I  +    +  +      S+  +P    E S +   S    
Sbjct: 151 VPLIQDIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPSTYREGSLALGASKIFT 210

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + + +P +  G++  +++ ++      +A  M++  
Sbjct: 211 IFRILLPAARSGIMTGVILGIARALGETMAIIMVMGN 247



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 374 QDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    +V    A ++ +PVGI             ++  I+P  +LLA
Sbjct: 76  QDWLPPALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAPKQVADIIRPAVELLA 135

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P+ 
Sbjct: 136 GIPSVVYGFFGLVIIVPLIQDIFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPST 195

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           ++E + +   +       I+LP      +TG I     A   ++   +   
Sbjct: 196 YREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMAIIMVMG 246


>gi|78045006|ref|YP_359637.1| phosphate ABC transporter permease [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997121|gb|ABB16020.1| phosphate ABC transporter, permease protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 285

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 63/175 (36%), Gaps = 5/175 (2%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           ++I  I  +L        P  I            +      T   ++ ++  SL      
Sbjct: 25  ILISFIFYILKRGLPVLTPSFIFGPPSEMEAGGGVGPELFNTFYILVLSLAFSLPVGLGA 84

Query: 87  ATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
               A+  + G V+  I    +++ ++P + F  F ++ F+N           A   ++ 
Sbjct: 85  GIWLAEYAKPGRVVNIIRTSTEMLATVPSIVFGLFGMIIFVNFLGLGFTIIGGALTLSLL 144

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              V  +     +++  +P+     S +   +  Q  + + +P ++P ++  + +
Sbjct: 145 NLPV--LIRVTEEAVRAVPKSYRMASLALGATKSQTLFRVVLPAALPRIITGVTL 197



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 15/142 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVS 442
           T + +V+ +  +  + +  GIW+         +       ++LA  P+ VF    +    
Sbjct: 66  TFYILVLSLAFSLPVGLGAGIWLAEYAKPGRVVNIIRTSTEMLATVPSIVFGLFGMIIFV 125

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWR 495
            +     L L   +I G     L N             A P  ++  + +   T  +   
Sbjct: 126 NF-----LGLGFTIIGGALTLSLLNLPVLIRVTEEAVRAVPKSYRMASLALGATKSQTLF 180

Query: 496 YIILPGIFPYYVTGAITACGGA 517
            ++LP   P  +TG     G A
Sbjct: 181 RVVLPAALPRIITGVTLVAGRA 202


>gi|16801702|ref|NP_471970.1| hypothetical protein lin2640 [Listeria innocua Clip11262]
 gi|16804535|ref|NP_466020.1| hypothetical protein lmo2497 [Listeria monocytogenes EGD-e]
 gi|46908669|ref|YP_015058.1| phosphate ABC transporter permease [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47092783|ref|ZP_00230568.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 4b H7858]
 gi|47096090|ref|ZP_00233691.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 1/2a F6854]
 gi|217963401|ref|YP_002349079.1| phosphate ABC transporter permease PstA [Listeria monocytogenes
           HCC23]
 gi|224499853|ref|ZP_03668202.1| phosphate ABC transporter, permease protein PstA [Listeria
           monocytogenes Finland 1988]
 gi|224503262|ref|ZP_03671569.1| phosphate ABC transporter, permease protein PstA [Listeria
           monocytogenes FSL R2-561]
 gi|226225045|ref|YP_002759152.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes Clip81459]
 gi|254825381|ref|ZP_05230382.1| phosphate ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254828072|ref|ZP_05232759.1| phosphate ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831080|ref|ZP_05235735.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes 10403S]
 gi|254853975|ref|ZP_05243323.1| phosphate ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254900365|ref|ZP_05260289.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes J0161]
 gi|254913396|ref|ZP_05263408.1| phosphate ABC transporter [Listeria monocytogenes J2818]
 gi|254932262|ref|ZP_05265621.1| phosphate ABC transporter [Listeria monocytogenes HPB2262]
 gi|254937777|ref|ZP_05269474.1| phosphate ABC transporter [Listeria monocytogenes F6900]
 gi|255030046|ref|ZP_05301997.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes LO28]
 gi|255520616|ref|ZP_05387853.1| phosphate ABC transporter (permease protein) [Listeria
           monocytogenes FSL J1-175]
 gi|284802935|ref|YP_003414800.1| hypothetical protein LM5578_2692 [Listeria monocytogenes 08-5578]
 gi|284996076|ref|YP_003417844.1| hypothetical protein LM5923_2641 [Listeria monocytogenes 08-5923]
 gi|290892660|ref|ZP_06555652.1| phosphate ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|300765004|ref|ZP_07074992.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           FSL N1-017]
 gi|16411985|emb|CAD00575.1| lmo2497 [Listeria monocytogenes EGD-e]
 gi|16415177|emb|CAC97867.1| lin2640 [Listeria innocua Clip11262]
 gi|46881941|gb|AAT05235.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47015551|gb|EAL06483.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 1/2a F6854]
 gi|47018871|gb|EAL09619.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           str. 4b H7858]
 gi|217332671|gb|ACK38465.1| phosphate ABC transporter, permease protein PstA [Listeria
           monocytogenes HCC23]
 gi|225877507|emb|CAS06221.1| Putative phosphate ABC transporter (permease protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258600456|gb|EEW13781.1| phosphate ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258607364|gb|EEW19972.1| phosphate ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|258610380|gb|EEW22988.1| phosphate ABC transporter [Listeria monocytogenes F6900]
 gi|284058497|gb|ADB69438.1| hypothetical protein LM5578_2692 [Listeria monocytogenes 08-5578]
 gi|284061543|gb|ADB72482.1| hypothetical protein LM5923_2641 [Listeria monocytogenes 08-5923]
 gi|290557720|gb|EFD91242.1| phosphate ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|293583819|gb|EFF95851.1| phosphate ABC transporter [Listeria monocytogenes HPB2262]
 gi|293591402|gb|EFF99736.1| phosphate ABC transporter [Listeria monocytogenes J2818]
 gi|293594624|gb|EFG02385.1| phosphate ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300514304|gb|EFK41363.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           FSL N1-017]
 gi|307572024|emb|CAR85203.1| phosphate ABC transporter, permease protein [Listeria monocytogenes
           L99]
 gi|313617210|gb|EFR89702.1| phosphate ABC transporter, permease protein PstA [Listeria innocua
           FSL S4-378]
 gi|313622397|gb|EFR92861.1| phosphate ABC transporter, permease protein PstA [Listeria innocua
           FSL J1-023]
 gi|328465105|gb|EGF36373.1| phosphate ABC transporter, permease protein PstA [Listeria
           monocytogenes 1816]
 gi|332312927|gb|EGJ26022.1| Phosphate ABC transporter PstA [Listeria monocytogenes str. Scott
           A]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 84/215 (39%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A ++VI +  +L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVLIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLVITMIISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPIL 219



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + +    ++ G+   I  + +  +   F  T              ++    +++I  II
Sbjct: 16  AIAVLIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFYMLVITMII 75

Query: 401 WIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++      +          ++L++ P+     +VV    +      +  S
Sbjct: 76  SVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVVGLFGFLVFVIQMGWS 130

Query: 454 LLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +I G     +FN       V    +A PN  +E   +  ++ W     +++P   P  
Sbjct: 131 FSVISGALTLTIFNLPLLIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPAALPAI 190

Query: 507 VTGAITACGGAWN 519
           +TG I A G  + 
Sbjct: 191 ITGVILAAGRVFG 203


>gi|324998121|ref|ZP_08119233.1| binding-protein-dependent transport systems inner membrane
           component [Pseudonocardia sp. P1]
          Length = 253

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 11/206 (5%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G   G     +G++ +   +     ++      +    + +++A  I +P+G WIG   
Sbjct: 3   AGADGGRGMTYLGWLFDGANWTGPEGILVRLAEHLGYTALTMLVAMAIALPLGAWIGHTG 62

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
                +   A  L A P       ++  +        L   + ++      +L    +G 
Sbjct: 63  RGGVVVVGLANALRALPTLG----LLVLLFLLVGLGLLGPLIALVIMAVPPLLAGAYSGV 118

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
                   + A    + G      + LP   P  V G  +A     + + V+     G  
Sbjct: 119 RNVDPAVVDAARGVGMRGPEVLWKVELPNALPLIVGGVRSATLQVVSTATVAAYVGIG-- 176

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLG 558
                GLG +I +   +  F  ++ G
Sbjct: 177 -----GLGRFILDGLGQRDFGAMIGG 197



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 19/182 (10%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L ++   T L ML AM I+L            + R G+V+V + + +++           
Sbjct: 33  LAEHLGYTALTMLVAMAIAL----PLGAWIGHTGRGGVVVVGLANALRA--------LPT 80

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  + L    V    L  + A+    V  +    Y  + N+   + + +R   + G +  
Sbjct: 81  LGLLVLLFLLVGLGLLGPLIALVIMAVPPLLAGAYSGVRNVDPAVVDAARGVGMRGPEVL 140

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + +P ++P +V  +  +          +  + +G       G+G +I   + ++D  A
Sbjct: 141 WKVELPNALPLIVGGVRSATLQVVSTATVAAYVGIG-------GLGRFILDGLGQRDFGA 193

Query: 241 IL 242
           ++
Sbjct: 194 MI 195


>gi|288905483|ref|YP_003430705.1| proline/glycine betaine ABC transporter permease [Streptococcus
           gallolyticus UCN34]
 gi|288732209|emb|CBI13774.1| putative proline/glycine betaine ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 208

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 76/187 (40%), Gaps = 19/187 (10%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           +++ +LLF  V   +     ++    V +L ++ +IP     T  +       P   +G 
Sbjct: 26  SLLFALLFASVITVILLFYPKIRQASVYVLSLLYAIPSFALFTLLI-------PVTGLGT 78

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A I  +  +Q + +  +    L  +   + EV+    ++ WQ    + +P +   +  
Sbjct: 79  RTAIIALVIYAQ-YTLVRTFLAGLTQVDDSIVEVATGMGMTRWQILSKIQLPLAQSSIFA 137

Query: 195 NMMMSMSGGWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + ++         AS MI +    + I   G+GS +   ++   L  +L+ ++  + + 
Sbjct: 138 GLRLA---------ASSMIAIATIASTINAGGLGSILFGGLRTMSLPKLLWGIILTVALS 188

Query: 253 FLYDQLL 259
            L + +L
Sbjct: 189 LLVNLIL 195



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 15/190 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +T F ++  ++ AS+I + +       P I         LL A P+   F L++      
Sbjct: 22  LTSFSLLFALLFASVITVILLF----YPKIRQASVYVLSLLYAIPSFALFTLLIPVTGLG 77

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    + ++   Q+ ++   +AG +   +   EVA+   +T W+    I LP    
Sbjct: 78  TRT----AIIALVIYAQYTLVRTFLAGLTQVDDSIVEVATGMGMTRWQILSKIQLPLAQS 133

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
               G   A       + ++         +   GLG+ +       S P+++ G+++   
Sbjct: 134 SIFAGLRLAASSMIAIATIA-------STINAGGLGSILFGGLRTMSLPKLLWGIILTVA 186

Query: 565 FVLALNRFLW 574
             L +N  L+
Sbjct: 187 LSLLVNLILY 196


>gi|227890359|ref|ZP_04008164.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849173|gb|EEJ59259.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 296

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++ GI+  +L           +            +      +   ++  ++ISL  
Sbjct: 20  IVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISLPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A   K      ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
              F   +  +T ++ Q++  +P+   +   +  LS W+    + +P ++PG++  +++S
Sbjct: 140 LTFFN--LPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           VS ++ I +  +   +  G+   S  ++ +   +YQ    V      +++ +V+ +II+ 
Sbjct: 18  VSIVVIILFGILGDILVSGVPHLSWHFLSSEASSYQAGGGVRDQLFNSLYLLVLTLIISL 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I +  GI++         ++ I+   ++L++ P+ V   F  ++  V +      +  +
Sbjct: 78  PIALGAGIYLAEYAKDNWFTNLIRTTIEILSSLPSIVVGLFGYLLFVVQFGFGFSIISGA 137

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L + F     +  N+       P   ++   +  ++ W+  R I+LP   P  +TG I +
Sbjct: 138 LALTFFNLPTLTSNIEQAIEGVPQAQRDAGLALGLSNWKTIRGIVLPAALPGILTGIILS 197

Query: 514 CGGAWN 519
            G  + 
Sbjct: 198 AGRIFG 203


>gi|329999097|ref|ZP_08303303.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328538458|gb|EGF64575.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 385

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA--------AI 139
               +  R        L+++Q+IP +      +     L        EL         A+
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-M 198
            A+    +  +   +   L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+      VVA+        +I   G G+ +   +    L  +L  ++  + +  + D L
Sbjct: 320 SVQTVGMAVVAA--------LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDAL 371

Query: 259 L 259
            
Sbjct: 372 F 372



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 19/180 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLS 453
           +W+  RP   +       ++   P+   F L+++ ++                       
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       ++  V+ G    P D  E A++  ++  + +R + LP   P  +      
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 320 SVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|90411749|ref|ZP_01219758.1| putative phosphate ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90327311|gb|EAS43675.1| putative phosphate ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 319

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 84/216 (38%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS-------R 67
            F N+F L A + ++ +I I     +E         +  I L    LP            
Sbjct: 44  FFKNLFMLSAAIGILSLITIGYFIFREGYAAFAHAGVTNIVLGTDWLPPALFGIAPMIVA 103

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + +    A+++ +    + A   A+   +RL  ++ P+++++  IP + +    L   V 
Sbjct: 104 SLVSTAGAVILGVPVGVLTAIFIAEVAPKRLANIVRPLIELLAGIPSVVYGFFGLVIIVP 163

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +++        LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 164 LIQSVFNVPAGNTVLAGIIVLAVMILPTVITVSETSIRAVPRVYKEGSLALGASHMFTIF 223

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L +P +  G++  +++ ++      +A  M++   
Sbjct: 224 KLLLPAARSGIMTGVILGIARALGETMAIIMVMGNS 259



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 17/231 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            R  F +N   L +   +  ++ I +F    G A          ++        L+ I  
Sbjct: 40  WRELFFKNLFMLSAAIGILSLITIGYFIFREGYAAFAHAGVTNIVLGTDWLPPALFGIAP 99

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--- 433
             +           A I+ +PVG+             +++ ++P  +LLA  P+ V+   
Sbjct: 100 MIVASLVSTAG---AVILGVPVGVLTAIFIAEVAPKRLANIVRPLIELLAGIPSVVYGFF 156

Query: 434 -----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
                 PL+ S  +    N  L   +++       ++        A P  +KE + +   
Sbjct: 157 GLVIIVPLIQSVFNVPAGNTVLAGIIVLAVMILPTVITVSETSIRAVPRVYKEGSLALGA 216

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +       ++LP      +TG I     A   ++   +       +    L
Sbjct: 217 SHMFTIFKLLLPAARSGIMTGVILGIARALGETMAIIMVMGNSPAMPEGLL 267


>gi|17988022|ref|NP_540656.1| ABC transporter membrane protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265992409|ref|ZP_06104966.1| ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1]
 gi|17983767|gb|AAL52920.1| thiamine transport system permease protein thip [Brucella
           melitensis bv. 1 str. 16M]
 gi|263003475|gb|EEZ15768.1| ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1]
          Length = 211

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 60/180 (33%), Gaps = 9/180 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L E +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRCTETGLIEAAEILGAGRMAILFRIRIPSAFPAL 182



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         E A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRCTETGLIEAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVT 508
                    I +P  FP   +
Sbjct: 164 AGRMAILFRIRIPSAFPALAS 184


>gi|15610893|ref|NP_218274.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter PROW
           [Mycobacterium tuberculosis H37Rv]
 gi|15843377|ref|NP_338414.1| amino acid ABC transporter, permease protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31794927|ref|NP_857420.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter PROW
           [Mycobacterium bovis AF2122/97]
 gi|121639671|ref|YP_979895.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/l-proline) transport integral
           membrane protein ABC transporter proW [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148663623|ref|YP_001285146.1| amino acid ABC transporter permease protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148824962|ref|YP_001289716.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis F11]
 gi|167970918|ref|ZP_02553195.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis H37Ra]
 gi|215405812|ref|ZP_03417993.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis 02_1987]
 gi|215413685|ref|ZP_03422353.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215425003|ref|ZP_03422922.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis T92]
 gi|215432736|ref|ZP_03430655.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis EAS054]
 gi|215448101|ref|ZP_03434853.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis T85]
 gi|218755540|ref|ZP_03534336.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis GM 1503]
 gi|219559841|ref|ZP_03538917.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis T17]
 gi|224992167|ref|YP_002646856.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/L-proline) transport integral
           membrane protein ABC transporter [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253800804|ref|YP_003033805.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 1435]
 gi|254233249|ref|ZP_04926575.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis C]
 gi|254366302|ref|ZP_04982346.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552871|ref|ZP_05143318.1| osmoprotectant proW [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184680|ref|ZP_05762154.1| osmoprotectant proW [Mycobacterium tuberculosis CPHL_A]
 gi|260198805|ref|ZP_05766296.1| osmoprotectant proW [Mycobacterium tuberculosis T46]
 gi|260202960|ref|ZP_05770451.1| osmoprotectant proW [Mycobacterium tuberculosis K85]
 gi|289441193|ref|ZP_06430937.1| osmoprotectant proW [Mycobacterium tuberculosis T46]
 gi|289445356|ref|ZP_06435100.1| osmoprotectant proW [Mycobacterium tuberculosis CPHL_A]
 gi|289556022|ref|ZP_06445232.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 605]
 gi|289572003|ref|ZP_06452230.1| osmoprotectant proW [Mycobacterium tuberculosis T17]
 gi|289572407|ref|ZP_06452634.1| osmoprotectant proW [Mycobacterium tuberculosis K85]
 gi|289747597|ref|ZP_06506975.1| amino acid ABC transporter [Mycobacterium tuberculosis 02_1987]
 gi|289748276|ref|ZP_06507654.1| osmoprotectant proW [Mycobacterium tuberculosis T92]
 gi|289755888|ref|ZP_06515266.1| osmoprotectant transport system permease proW [Mycobacterium
           tuberculosis EAS054]
 gi|289759919|ref|ZP_06519297.1| osmoprotectant transport system permease proW [Mycobacterium
           tuberculosis T85]
 gi|289763939|ref|ZP_06523317.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis GM 1503]
 gi|294995331|ref|ZP_06801022.1| osmoprotectant proW [Mycobacterium tuberculosis 210]
 gi|297636438|ref|ZP_06954218.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 4207]
 gi|297733432|ref|ZP_06962550.1| osmoprotectant proW [Mycobacterium tuberculosis KZN R506]
 gi|298527230|ref|ZP_07014639.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306778117|ref|ZP_07416454.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu001]
 gi|306778649|ref|ZP_07416986.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu002]
 gi|306786671|ref|ZP_07424993.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu003]
 gi|306791038|ref|ZP_07429360.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu004]
 gi|306791357|ref|ZP_07429659.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu005]
 gi|306795422|ref|ZP_07433724.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu006]
 gi|306801397|ref|ZP_07438065.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu008]
 gi|306805603|ref|ZP_07442271.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu007]
 gi|306970000|ref|ZP_07482661.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu009]
 gi|306974234|ref|ZP_07486895.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu010]
 gi|307081942|ref|ZP_07491112.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu011]
 gi|307086555|ref|ZP_07495668.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu012]
 gi|313660763|ref|ZP_07817643.1| osmoprotectant proW [Mycobacterium tuberculosis KZN V2475]
 gi|2960181|emb|CAA18079.1| POSSIBLE OSMOPROTECTANT (GLYCINE
           BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT INTEGRAL
           MEMBRANE PROTEIN ABC TRANSPORTER PROW [Mycobacterium
           tuberculosis H37Rv]
 gi|13883742|gb|AAK48228.1| amino acid ABC transporter, permease protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31620525|emb|CAD95969.1| POSSIBLE OSMOPROTECTANT (GLYCINE
           BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT INTEGRAL
           MEMBRANE PROTEIN ABC TRANSPORTER PROW [Mycobacterium
           bovis AF2122/97]
 gi|121495319|emb|CAL73806.1| possible osmoprotectant (glycine
           betaine/carnitine/choline/l-proline) transport integral
           membrane protein ABC transporter proW [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|124603042|gb|EAY61317.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis C]
 gi|134151814|gb|EBA43859.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507775|gb|ABQ75584.1| amino acid ABC transporter permease protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148723489|gb|ABR08114.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport system permease protein proW [Mycobacterium
           tuberculosis F11]
 gi|224775282|dbj|BAH28088.1| putative osmoprotectant (glycine
           betaine/carnitine/choline/L-proline) transport integral
           membrane protein ABC transporter [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253322307|gb|ACT26910.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 1435]
 gi|289414112|gb|EFD11352.1| osmoprotectant proW [Mycobacterium tuberculosis T46]
 gi|289418314|gb|EFD15515.1| osmoprotectant proW [Mycobacterium tuberculosis CPHL_A]
 gi|289440654|gb|EFD23147.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 605]
 gi|289536838|gb|EFD41416.1| osmoprotectant proW [Mycobacterium tuberculosis K85]
 gi|289545757|gb|EFD49405.1| osmoprotectant proW [Mycobacterium tuberculosis T17]
 gi|289688125|gb|EFD55613.1| amino acid ABC transporter [Mycobacterium tuberculosis 02_1987]
 gi|289688863|gb|EFD56292.1| osmoprotectant proW [Mycobacterium tuberculosis T92]
 gi|289696475|gb|EFD63904.1| osmoprotectant transport system permease proW [Mycobacterium
           tuberculosis EAS054]
 gi|289711445|gb|EFD75461.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter proW
           [Mycobacterium tuberculosis GM 1503]
 gi|289715483|gb|EFD79495.1| osmoprotectant transport system permease proW [Mycobacterium
           tuberculosis T85]
 gi|298497024|gb|EFI32318.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308213639|gb|EFO73038.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu001]
 gi|308328372|gb|EFP17223.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu002]
 gi|308328777|gb|EFP17628.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu003]
 gi|308332619|gb|EFP21470.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu004]
 gi|308340110|gb|EFP28961.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu005]
 gi|308344098|gb|EFP32949.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu006]
 gi|308347900|gb|EFP36751.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu007]
 gi|308351768|gb|EFP40619.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu008]
 gi|308352551|gb|EFP41402.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu009]
 gi|308356502|gb|EFP45353.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu010]
 gi|308360450|gb|EFP49301.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu011]
 gi|308364032|gb|EFP52883.1| osmoprotectant proW [Mycobacterium tuberculosis SUMu012]
 gi|323717622|gb|EGB26824.1| osmoprotectant proW [Mycobacterium tuberculosis CDC1551A]
 gi|326905595|gb|EGE52528.1| osmoprotectant proW [Mycobacterium tuberculosis W-148]
 gi|328460531|gb|AEB05954.1| osmoprotectant proW [Mycobacterium tuberculosis KZN 4207]
          Length = 229

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 12/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I L+       L  ++  L  +      ++ +IP L          + L  G  I
Sbjct: 23  LLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALF-----VVLPLIIGTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I A+       +  ++ ++L  +P  + + + +   S   +   + +P S+P L
Sbjct: 78  LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + +        V    M+ VG  VI + G+G++     +      I+  ++ M  + 
Sbjct: 138 VAGLRV------VAVTNIAMVSVGS-VIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLA 190

Query: 253 FLYDQLL 259
            + D ++
Sbjct: 191 IVVDVVI 197



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 8/204 (3%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
           H+          L  + +   ++ ++I  +  +P+G+ +   P +       A ++   P
Sbjct: 2   HYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIP 61

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           +   F ++   +    L+    +  L  + T   ++  V+    A P    + A++   +
Sbjct: 62  SLALFVVLPLIIGTRILDEANVIVALAAYTTA-LLVRAVLEALDAVPAQVHDAATAIGYS 120

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P  V G             V  V   G       GLG +     + 
Sbjct: 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIG-------GLGTWFTAGYQT 173

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
               ++V GV+ M    + ++  +
Sbjct: 174 NKSDQIVAGVVAMFLLAIVVDVVI 197


>gi|331702681|ref|YP_004399640.1| phosphate ABC transporter inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
 gi|329130024|gb|AEB74577.1| phosphate ABC transporter, inner membrane subunit PstC
           [Lactobacillus buchneri NRRL B-30929]
          Length = 307

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 7/173 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF- 115
           + +LP   +  ++ +L+A+V +                R   +L P+++++  IP + + 
Sbjct: 80  IGALPMIVTSFSVTVLAAVVATPFALGVALFMTEIAPERGTKILQPVIELLVGIPSVVYG 139

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L+  V    + + G   G  LA    +F   +  +T     S+  +P      S + 
Sbjct: 140 FIGLSVIVPLIRHSFGGTGFGI-LAGTLVLFVMVLPTITSLSVDSIKAVPMFYRSASLAL 198

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
             + WQ  + + +  + PG++  ++  MS  +   +A +M+ +G+ V+   G+
Sbjct: 199 GATRWQTIYKVVLRSATPGILTAVIFGMSRAFGEALAVQMV-IGNAVLMPHGL 250



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 64/159 (40%), Gaps = 14/159 (8%)

Query: 394 IIIASIIWIP--VGIWIGFRP----HISSKIQPFAQLLAAFPANVFFPLVVSCV------ 441
            ++A+++  P  +G+ +          +  +QP  +LL   P+ V+  + +S +      
Sbjct: 93  TVLAAVVATPFALGVALFMTEIAPERGTKILQPVIELLVGIPSVVYGFIGLSVIVPLIRH 152

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           S+      +    L++F      + ++ +    A P  ++  + +   T W+    ++L 
Sbjct: 153 SFGGTGFGILAGTLVLFVMVLPTITSLSVDSIKAVPMFYRSASLALGATRWQTIYKVVLR 212

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              P  +T  I     A+  ++  ++   G+  L   GL
Sbjct: 213 SATPGILTAVIFGMSRAFGEALAVQMV-IGNAVLMPHGL 250


>gi|317485963|ref|ZP_07944818.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922736|gb|EFV43967.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 289

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 86/221 (38%), Gaps = 26/221 (11%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           + + ++ +L  G Q+  +P+  +D     LD   L +    +      + +  LL  + +
Sbjct: 29  IGLLVVTVLTRGEQDFVLPQFTLDNYLRLLDPTFL-KILWESLWLAFMSTLACLLVGYPF 87

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIP-----------------ILGFLTFTVVYFMNLY-P 128
           A   A   R    + P L ++  IP                   G ++  +V+      P
Sbjct: 88  AYRIA---RASAKMKPWLLLLVIIPFWTNSLIRTYALILILKANGLISTLLVWLGVTEQP 144

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              +  + A    I  + +  M   +Y S+  +   L + +R    SG+Q FW++  P +
Sbjct: 145 VSFMYGDFAVFMGILYTFLPFMVLPLYASIEKLDSRLLDAARDLGASGFQSFWHVTFPLT 204

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +PG++   M+            E++    +++    IG++I
Sbjct: 205 LPGIIAGSMLVFLPSLGAFYIPEILGGAKSML----IGNFI 241



 Score = 37.2 bits (85), Expect = 8.6,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 66/208 (31%), Gaps = 34/208 (16%)

Query: 365 GYIVNHFTYQDVLYVIWLGCI-----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            +++  FT  + L ++    +     +++   +  +   ++  P    I      S+K++
Sbjct: 43  DFVLPQFTLDNYLRLLDPTFLKILWESLWLAFMSTLACLLVGYPFAYRIA---RASAKMK 99

Query: 420 PFAQLLAAFP-----------------ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+  LL   P                 AN     ++  +       +       +F    
Sbjct: 100 PWLLLLVIIPFWTNSLIRTYALILILKANGLISTLLVWLGVTEQPVSFMYGDFAVFMGIL 159

Query: 463 YILFNVI-----AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           Y     +     A      +   + A     +G++ + ++  P   P  + G++     +
Sbjct: 160 YTFLPFMVLPLYASIEKLDSRLLDAARDLGASGFQSFWHVTFPLTLPGIIAGSMLVFLPS 219

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAE 545
             A  + E+       L    +G +I  
Sbjct: 220 LGAFYIPEILGGAKSML----IGNFIKN 243


>gi|104773975|ref|YP_618955.1| phosphate ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103423056|emb|CAI97759.1| Phosphate ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|325125670|gb|ADY85000.1| Phosphate permease [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 302

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  ++I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244



 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ ++I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFATSLL 247


>gi|262403209|ref|ZP_06079769.1| phosphate transport system permease protein PstC [Vibrio sp. RC586]
 gi|262350708|gb|EEY99841.1| phosphate transport system permease protein PstC [Vibrio sp. RC586]
          Length = 306

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP  A      
Sbjct: 28  KERIFHGLFLTSAVIGIVSLGIIAYFIVRESIPAFQEAGVSGIVLGQDWLPP-ALYGVAT 86

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A V+S    ++       L A        +R+  V+ P ++++  IP + +    L 
Sbjct: 87  MIVASVVSTFGAVIVGVPVGVLTAVFIAEVAPKRVANVIRPAVELLAGIPSVVYGFFGLV 146

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 147 IIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASSI 206

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 207 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 15/178 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             +++ I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAVFIAEVAPKRVANVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRT 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           +KE + +   +       +++P      +TG I   G A   ++   +       +  
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPQ 251


>gi|256392272|ref|YP_003113836.1| binding-protein-dependent transporters inner membrane component
           [Catenulispora acidiphila DSM 44928]
 gi|256358498|gb|ACU71995.1| binding-protein-dependent transport systems inner membrane
           component [Catenulispora acidiphila DSM 44928]
          Length = 216

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 77/206 (37%), Gaps = 18/206 (8%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +     L +++  L+     A L  +  ++   +V +L ++ S+P +      V      
Sbjct: 23  QQLTMALLSVLFGLIMAIPVALLCVRYPKIYPAVVGLLTVIYSLPSIALFVLLV------ 76

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                   +   I  +    +  +  ++ + +  IP D+   + +   +G ++   + +P
Sbjct: 77  --PSTGLTQTTVIIPLSFYSLAALVPNIVEGIRGIPEDVRLAAVAMGYTGTRRLVAVDLP 134

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++P ++  + ++  G    V    +I VG         G+    A +       +  ++
Sbjct: 135 LAVPPIMAGLRIATVGNISMVSVGTVIGVGAF-------GALFTAAAQLSRSDLAVTGIV 187

Query: 247 TMLGVIFLYDQLLF---RPMIVWSNK 269
            ++ +    D +L    R +  W+ +
Sbjct: 188 VIVALALACDLILVIIQRLLTPWNKR 213



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ ++   I+ IPV +     P I   +     ++ + P+   F L+V           +
Sbjct: 29  LLSVLFGLIMAIPVALLCVRYPKIYPAVVGLLTVIYSLPSIALFVLLVPSTGLTQTTVII 88

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            LS   +      ++ N++ G    P D +  A +   TG R    + LP   P  + G 
Sbjct: 89  PLSFYSLAA----LVPNIVEGIRGIPEDVRLAAVAMGYTGTRRLVAVDLPLAVPPIMAGL 144

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             A  G  +   V  V   G         GA    + +       V G++++    LA +
Sbjct: 145 RIATVGNISMVSVGTVIGVGAF-------GALFTAAAQLSRSDLAVTGIVVIVALALACD 197

Query: 571 RFL 573
             L
Sbjct: 198 LIL 200


>gi|253730810|ref|ZP_04864975.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725469|gb|EES94198.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 219

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSVQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D + ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSVQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E A
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|229099261|ref|ZP_04230192.1| ABC transporter permease protein [Bacillus cereus Rock3-29]
 gi|229105419|ref|ZP_04236062.1| ABC transporter permease protein [Bacillus cereus Rock3-28]
 gi|229118273|ref|ZP_04247629.1| ABC transporter permease protein [Bacillus cereus Rock1-3]
 gi|228665103|gb|EEL20589.1| ABC transporter permease protein [Bacillus cereus Rock1-3]
 gi|228677975|gb|EEL32209.1| ABC transporter permease protein [Bacillus cereus Rock3-28]
 gi|228684079|gb|EEL38026.1| ABC transporter permease protein [Bacillus cereus Rock3-29]
          Length = 150

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P     P+++         PN+  S+ M +  +    +  + +      +++ +V  +F
Sbjct: 1   MPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTF 55

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+ ++ +ILP  FP  ++      G +W   I  E+       +   GLG  I+  
Sbjct: 56  GANKWQCYKQVILPSSFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYG 109

Query: 547 TEKGSF 552
            +  +F
Sbjct: 110 FQVFNF 115



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 48/129 (37%), Gaps = 14/129 (10%)

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P +      +V F       +    + +I              +Y +   +  +  +V 
Sbjct: 1   MPKVALGPIIIVIFGPNISSSIAMGVIISIIITILV--------IYSAFQEVDSNYIKVM 52

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +F  + WQ +  + +P S P ++  + +++   W  V+  E++V         G+G  I
Sbjct: 53  DTFGANKWQCYKQVILPSSFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLI 106

Query: 230 ALAIKEQDL 238
           +   +  + 
Sbjct: 107 SYGFQVFNF 115


>gi|152971105|ref|YP_001336214.1| glycine betaine/choline ABC transporter membrane protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955954|gb|ABR77984.1| putative glycine/betaine/choline transport protein, osmoprotection
           (ABC superfamily, membrane) [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 385

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA--------AI 139
               +  R        L+++Q+IP +      +     L        EL         A+
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-M 198
            A+    +  +   +   L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+      VVA+        +I   G G+ +   +    L  +L  ++  + +  + D L
Sbjct: 320 SVQTVGMAVVAA--------LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDAL 371

Query: 259 L 259
            
Sbjct: 372 F 372



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 19/180 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLS 453
           +W+  RP   +       ++   P+   F L+++ ++                       
Sbjct: 200 VWLWRRPRWQAPAFTALNVIQTIPSVALFGLLIAPLAGLARYFPTLGELGVSGTGVAPAL 259

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       ++  V+ G    P D  E A++  ++  + +R + LP   P  +      
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 320 SVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|157371355|ref|YP_001479344.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157323119|gb|ABV42216.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 741

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 74/477 (15%), Positives = 148/477 (31%), Gaps = 55/477 (11%)

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGW 177
            +     + PG+ +   L  I+         + F +   +   +   LEE S++ R + W
Sbjct: 290 LLASLFGIEPGRWL-YGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRANRW 348

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + F Y+ +P   PGL    ++S          + M++ G   +    I   +  A  +  
Sbjct: 349 RTFRYVSLPLMAPGLANAFLISFIES-MADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPS 407

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
                 A+L ++ + F     + + + +    F      G                  R 
Sbjct: 408 R----AAVLAIILLCFTLSAFILQRLWLAGKNFATVTGKGDSGT---------HCGLPRG 454

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           + Y+ +    P                F      + L      S+ LD          A 
Sbjct: 455 LRYAVYALVIPWG-------------LFTLVVYGMILIGGFVQSWGLDNSLTLAHYARAF 501

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G  W S   +     +            T+   ++   + +I+ +     I  +     +
Sbjct: 502 GFQWNSGQIVWTGVAWNSFWT-------TLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQ 554

Query: 418 IQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS--- 473
              F  +L+ A P  V   + VS +  Y+L P       +I    + +  N+  G     
Sbjct: 555 TFEFMLMLSFAIPGTV---IGVSYIMAYNLPPLEITGTALILVACF-VFRNMPVGVRGGI 610

Query: 474 ----AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                      E + +   + +R  R +ILP + P      + A   A  +         
Sbjct: 611 AAMSQLDRSLDEASLTLRASSFRTLRKVILPLLKPAISAALVYAFVRAITSISAVIFLVS 670

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              ++ T+    YI    E G +    + +      ++ +   +     L G R LR
Sbjct: 671 AQYNMATS----YIVGLVENGEYG---VAIAYSSVLIVVMLAVILSFQLLVGERRLR 720


>gi|300854427|ref|YP_003779411.1| putative phosphate transporter permease [Clostridium ljungdahlii
           DSM 13528]
 gi|300434542|gb|ADK14309.1| predicted phosphate transport system permease protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 295

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 68/183 (37%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +    L++ +I  +L        P  +            +      +   ++ A++IS+ 
Sbjct: 19  VFVVALLVALIGYILFKGIGFFKPSFLFGNAKFGEAGGGIGPQLFNSFYMLIVALIISVP 78

Query: 82  FTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           F        A+  R G +L  I   ++ M S+P +    F ++ F+N+          A 
Sbjct: 79  FGIGGGIYLAEYAREGKLLNMIRLCIETMSSLPSIVVGLFGLLIFVNMTGWGFTLLSGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             +I               + +IP  ++E S     + WQ    + +P ++P ++  +++
Sbjct: 139 AISILNLPALTRVSENAIRVASIP--VKEASLGLGATRWQTISKVVLPSAIPQILTGIIL 196

Query: 199 SMS 201
           +  
Sbjct: 197 AAG 199



 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 25/195 (12%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396
            + +F   ++  +   I ++ IG+    F + +  +    G I      + + ++V +II
Sbjct: 16  AVTVFVVALLVALIGYILFKGIGFFKPSFLFGNAKFGEAGGGIGPQLFNSFYMLIVALII 75

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +    I  GI++         +       + +++ P+     +VV               
Sbjct: 76  SVPFGIGGGIYLAEYAREGKLLNMIRLCIETMSSLPS-----IVVGLFGLLIFVNMTGWG 130

Query: 454 LLMIFGTQWYILFNV---------IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             ++ G     + N+             ++ P   KE +     T W+    ++LP   P
Sbjct: 131 FTLLSGALAISILNLPALTRVSENAIRVASIP--VKEASLGLGATRWQTISKVVLPSAIP 188

Query: 505 YYVTGAITACGGAWN 519
             +TG I A G  + 
Sbjct: 189 QILTGIILAAGRIFG 203


>gi|163761274|ref|ZP_02168349.1| ABC phosphate transporter, inner membrane subunit PstA [Hoeflea
           phototrophica DFL-43]
 gi|162281431|gb|EDQ31727.1| ABC phosphate transporter, inner membrane subunit PstA [Hoeflea
           phototrophica DFL-43]
          Length = 432

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 60/162 (37%), Gaps = 6/162 (3%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLV 101
               D      +   L      +   ML  + +SL      +      A K+R   ++ V
Sbjct: 191 FTAPDASDTRPEAAGLGVAILGSAYMMLIVLALSLPIGVAASIYLEEFAPKNRWTDLIEV 250

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I + + ++P + F    +  F+N + G    A +     +    +  +  +   +L  +
Sbjct: 251 NIAN-LAAVPSIVFGILGLALFIN-FIGLPQSAPVVGALVLTLMTLPTIIIATRAALKAV 308

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           P  + + +     S  Q  ++  +P + PG++   ++ ++  
Sbjct: 309 PPSIRDAALGIGASKMQAIFHHVLPLAAPGILTGAIIGLAQA 350



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 83/231 (35%), Gaps = 21/231 (9%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSK 417
           W          T  +   +      + + +++++ ++  I +   I++     +   +  
Sbjct: 188 WSFFTAPDASDTRPEAAGLGVAILGSAYMMLIVLALSLPIGVAASIYLEEFAPKNRWTDL 247

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASA 474
           I+     LAA P+ VF  L ++    +   P    +  +L++   T   I+    A   A
Sbjct: 248 IEVNIANLAAVPSIVFGILGLALFINFIGLPQSAPVVGALVLTLMTLPTIIIATRAALKA 307

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVASWGH 531
            P   ++ A     +  +   + +LP   P  +TGAI     A       ++  + ++  
Sbjct: 308 VPPSIRDAALGIGASKMQAIFHHVLPLAAPGILTGAIIGLAQALGETAPLLLIGMVAFVR 367

Query: 532 IHLRTTGLGAY---------IAESTEKGS---FPEVVLGVLIMCCFVLALN 570
            +      G +         +   T++G           ++++  F++ +N
Sbjct: 368 EYPGAPPEGFFDPASALPVQVYNWTQRGDPAFIERASGAIIVLLVFLVIMN 418


>gi|120536861|ref|YP_956919.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
 gi|120326695|gb|ABM21004.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
          Length = 274

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRM-LSAMVISLLFTFVYATLAAKS----RRLGMVLVP 102
           + ++ P   D       A   T +M L   VI ++ +   A LAA++      +  V   
Sbjct: 61  VGEMFPPATDRAQPIFEAILVTFQMALVGTVIGVILSVPIALLAARNTSPHPLVRYVTRS 120

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+  ++++P L +  F VV               A    I    +        ++   + 
Sbjct: 121 IISFVRTVPDLAWALFFVVSVGLG--------PFAGTLTIIVDTIGFCGRFFAEAFEEVD 172

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E   S       +   + +P ++P ++   + S+       V   ++  G      
Sbjct: 173 PGPSEALDSIGSRPLDRIAVVQIPGALPSMINTGLFSLEKAVRSSVVLGLVGAG------ 226

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG+ +A++++        + + ++  +++L +    R
Sbjct: 227 -GIGAELAVSMEMFRYDQAAFIIFSIFILVYLVEHFSSR 264



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 76/265 (28%), Gaps = 20/265 (7%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
               +   RF  P           + + L       +   ++     ++G IV       
Sbjct: 9   PASPMLRGRFQRPSWLSSGLFALFLGFFLWSLAGAGMSLQSLIQGLPNMGTIVGEMFPPA 68

Query: 376 ---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAF 428
                 +     +T    +V  +I  I+ +P+ +         P +    +     +   
Sbjct: 69  TDRAQPIFEAILVTFQMALVGTVIGVILSVPIALLAARNTSPHPLVRYVTRSIISFVRTV 128

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           P   +    V  V        L + +  I F  +++                 E   S  
Sbjct: 129 PDLAWALFFVVSVGLGPFAGTLTIIVDTIGFCGRFF-----AEAFEEVDPGPSEALDSIG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    + +PG  P  +   + +   A  +S+V  +   G       G+GA +A S 
Sbjct: 184 SRPLDRIAVVQIPGALPSMINTGLFSLEKAVRSSVVLGLVGAG-------GIGAELAVSM 236

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
           E   + +    +  +   V  +  F
Sbjct: 237 EMFRYDQAAFIIFSIFILVYLVEHF 261


>gi|46198727|ref|YP_004394.1| ABC transporter permease protein [Thermus thermophilus HB27]
 gi|46196350|gb|AAS80767.1| ABC transporter permease protein [Thermus thermophilus HB27]
          Length = 249

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P  S  ++P   LL A P  +  PL V  +     +      +L+       + F V  
Sbjct: 79  SPFFSDLLEPIMLLLNAIPRVILAPLFVIWLGIGLASKVALSLVLVAV----LMFFAVYG 134

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E   +     +   R + LP +  + ++    A G A+  ++V E  +  
Sbjct: 135 GVKEVDPRLLERVRTLGGGRYWLLREVYLPSLTAWVLSSLKVAVGFAFTGAVVGEFVA-- 192

Query: 531 HIHLRTTGLGAYIAESTEKGS 551
                + GLG  ++ +    +
Sbjct: 193 ----ASRGLGYLLSFAQSTYN 209



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 82/232 (35%), Gaps = 19/232 (8%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  +   +        +  +   T    L  +   +L       LAA S     +L 
Sbjct: 28  APPPHQVFLTLLDLFATGEVWPHLQATFTAALLGLFWGILLGGALGLLAALSPFFSDLLE 87

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           PI+ ++ +IP +      V++       KV  + +     +F        F++Y  +  +
Sbjct: 88  PIMLLLNAIPRVILAPLFVIWLGIGLASKVALSLVLVAVLMF--------FAVYGGVKEV 139

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              L E  R+     +     + +P     ++ ++ +++   +   V  E +        
Sbjct: 140 DPRLLERVRTLGGGRYWLLREVYLPSLTAWVLSSLKVAVGFAFTGAVVGEFVAAS----- 194

Query: 222 LPGIGSYIALAI----KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
             G+G  ++ A         L  I   +L +L + + +D+L  R ++ W  +
Sbjct: 195 -RGLGYLLSFAQSTYNARLSLALIALVVLFVLLLFYAFDRLEAR-LLRWRPR 244


>gi|310639292|ref|YP_003944051.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308752868|gb|ADO44012.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 379

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 71/199 (35%), Gaps = 15/199 (7%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
                 A   +LL             R   V +  L  +Q++P +      ++    +  
Sbjct: 176 LFLTFGAFAAALLIGIPLGLFLHMRARWRGVTLGALTAVQTVPSIALFGLMILPLGWMAN 235

Query: 129 GKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              + A L         A  A+    +  +  +    L  +   +++ +R+  ++  Q+ 
Sbjct: 236 NLPLAAALGIKGIGFAPAFMALTLYALLPIVANTVSGLQAVSPSVQDAARAMGMTDRQRL 295

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + VP ++P ++    +        +V S  +     +I   G+G+++   + +  +  
Sbjct: 296 WQVDVPLALPVILTGARI-------VLVQSIGLATVGALIGAGGLGTFVFQGLAQGAMDL 348

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           +L   L  + +  +  ++ 
Sbjct: 349 VLLGALPTVILAAIIAKIF 367



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 93/269 (34%), Gaps = 15/269 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             L   L V      ++  +  +++     + +    VV  +A    + +I  +  +  +
Sbjct: 105 PALWIWLSVAGLWTADSLTRSGASELFRLCIGLGLIGVVAALAATGLFDNISVVAEY--H 162

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                 +      +F        A +I IP+G+++  R             +   P+   
Sbjct: 163 ARARTFLREINTHLFLTFGAFAAALLIGIPLGLFLHMRARWRGVTLGALTAVQTVPSIAL 222

Query: 434 FPLVVSCVSYYHLNPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKE 481
           F L++  + +   N  L  +L             +       I+ N ++G  A     ++
Sbjct: 223 FGLMILPLGWMANNLPLAAALGIKGIGFAPAFMALTLYALLPIVANTVSGLQAVSPSVQD 282

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLG 540
            A +  +T  +    + +P   P  +TGA      +   A++ + + + G       GL 
Sbjct: 283 AARAMGMTDRQRLWQVDVPLALPVILTGARIVLVQSIGLATVGALIGAGGLGTFVFQGLA 342

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               +    G+ P V+L  +I   F + +
Sbjct: 343 QGAMDLVLLGALPTVILAAIIAKIFDVLI 371


>gi|157413145|ref|YP_001484011.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9215]
 gi|157387720|gb|ABV50425.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9215]
          Length = 315

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 93/270 (34%), Gaps = 34/270 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++++GII ++     E+     ++ +V    +       A       L    +SLL 
Sbjct: 34  FVAIILLGIILVVFFKSFESFSRYGLMFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLI 93

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPIL---------------GFLTFTV 120
           T       A         +    ++   ++++ +IP +                F  F  
Sbjct: 94  TIPLGIGTAIFITEDFIPKVFREIIGSFVELLAAIPSVVLGLWAIFVMEPFLRAFFVFLY 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM---YQSLCNIPRDLEEVSRSFRLSGW 177
            +F  +           ++ AI    V  +         SL  +P+ L   +     S W
Sbjct: 154 NFFGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRW 213

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
           +  + + +P ++ G++  +++++       +A  MI+            PG  I S +A 
Sbjct: 214 KTIFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLAN 273

Query: 232 AIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              E D   + ++ YA   ++ +  + +  
Sbjct: 274 QFGEADGSQVSSLFYAAFVLMILSLVVNIF 303



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 88/278 (31%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +    +V       ++   G +    +  + +   +     ++  +V   ++ +I I
Sbjct: 36  AIILLGIILVVFFKSFESFSRYGLMFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLITI 95

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANV---FFPLV--------------- 437
           P+GI                  I  F +LLAA P+ V   +   V               
Sbjct: 96  PLGIGTAIFITEDFIPKVFREIIGSFVELLAAIPSVVLGLWAIFVMEPFLRAFFVFLYNF 155

Query: 438 ---VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
              +   S      N  L++L++      I+ ++     +  P   +  A     + W+ 
Sbjct: 156 FGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKT 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEK 549
              +ILP      + G + A G A   ++   +          + L  G  I    + + 
Sbjct: 216 IFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLANQF 275

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L    FVL +   + +    +  +   L
Sbjct: 276 GEADGSQVSSLFYAAFVLMILSLVVNIFAQWLVKKFSL 313


>gi|15894984|ref|NP_348333.1| permease component of ATP-dependent phosphate uptake system
           [Clostridium acetobutylicum ATCC 824]
 gi|15024672|gb|AAK79673.1|AE007680_6 Permease component of ATP-dependent phosphate uptake system
           [Clostridium acetobutylicum ATCC 824]
 gi|325509121|gb|ADZ20757.1| Permease component of ATP-dependent phosphate uptake system
           [Clostridium acetobutylicum EA 2018]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 72/186 (38%), Gaps = 5/186 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  L   +L+   I  +++  +++     +     I      +      +   ++ +++I
Sbjct: 16  LISLFVVILLAAFIIFIIYRGRDSLNLSFLFGNPKIAEKGGGIGPELFNSFYMLIVSLLI 75

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++          ++  + G +L  I   ++ M S+P +    F ++ F+ +         
Sbjct: 76  TVPIGIGAGIYMSEYAKEGRILNFIRLCIETMASLPSIVVGLFGLLVFVTMTHWGYTILS 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A +  I    + +MT     ++      ++E S     + WQ    + +P +MP ++  
Sbjct: 136 GALVITILN--LPSMTRVSENAIRASSSKVKEASLGLGATNWQTIKNIVLPSAMPEILTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 IILSAG 199



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 11/191 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIA 397
           + Y++ +F   ++    I I ++    +   F + +       G I   +F    ++I++
Sbjct: 13  ILYLISLFVVILLAAFIIFIIYRGRDSLNLSFLFGNPKIAEKGGGIGPELFNSFYMLIVS 72

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSYYHLNPNLWLSLL 455
            +I +P+GI  G      +K       +          P +VV                 
Sbjct: 73  LLITVPIGIGAGIYMSEYAKEGRILNFIRLCIETMASLPSIVVGLFGLLVFVTMTHWGYT 132

Query: 456 MIFGTQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           ++ G     + N+ +          A  +  KE +     T W+  + I+LP   P  +T
Sbjct: 133 ILSGALVITILNLPSMTRVSENAIRASSSKVKEASLGLGATNWQTIKNIVLPSAMPEILT 192

Query: 509 GAITACGGAWN 519
           G I + G  + 
Sbjct: 193 GIILSAGRIFG 203


>gi|302342496|ref|YP_003807025.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfarculus baarsii DSM 2075]
 gi|301639109|gb|ADK84431.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfarculus baarsii DSM 2075]
          Length = 290

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 60/139 (43%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T    + A+V+SL      A   ++  R G +L  +   +  +  +P + F  F +  F+
Sbjct: 72  TLYLTIGAIVVSLPLGVAAAIYLSEYARDGRLLQIVRLGIQNLAGVPSVVFGLFGLALFV 131

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +   +  + LA    +    +  +  +  ++L  +P    E S +   + W+  + + 
Sbjct: 132 GFFGMGI--SMLAGSLTLGLLVLPTVIGASEEALRQVPPTFREASLALGATRWETIYKVV 189

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++++   
Sbjct: 190 LPAALPGILTGSILALGRA 208



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 17/208 (8%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R       L+      +  +  +     + G+ I +  Q  G I   F  +     +  G
Sbjct: 4   RISPAARKLRETVAFSLLRLSVLVVLGALGGIIIFLLIQGAGAISWEFLTEAPRDAMTKG 63

Query: 384 CITMFRVVVLIII--ASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFF 434
            I    V  L +   A ++ +P+G+              +   ++   Q LA  P+ VF 
Sbjct: 64  GIFPAIVGTLYLTIGAIVVSLPLGVAAAIYLSEYARDGRLLQIVRLGIQNLAGVPSVVFG 123

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHIT 489
              ++    +     + +S+L    T   ++   + GA        P  F+E + +   T
Sbjct: 124 LFGLALFVGFF---GMGISMLAGSLTLGLLVLPTVIGASEEALRQVPPTFREASLALGAT 180

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGA 517
            W     ++LP   P  +TG+I A G A
Sbjct: 181 RWETIYKVVLPAALPGILTGSILALGRA 208


>gi|262278827|ref|ZP_06056612.1| D-methionine transport system permease metI [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259178|gb|EEY77911.1| D-methionine transport system permease metI [Acinetobacter
           calcoaceticus RUH2202]
          Length = 219

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++ +I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LISGTVDTLLMVGASALIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V    +IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASALIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|218705657|ref|YP_002413176.1| putative ABC transporter permease [Escherichia coli UMN026]
 gi|293405596|ref|ZP_06649588.1| osmoprotectant uptake system permease yehW [Escherichia coli
           FVEC1412]
 gi|293410489|ref|ZP_06654065.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298381279|ref|ZP_06990878.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300901254|ref|ZP_07119355.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|301021106|ref|ZP_07185147.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|218432754|emb|CAR13648.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli UMN026]
 gi|291427804|gb|EFF00831.1| osmoprotectant uptake system permease yehW [Escherichia coli
           FVEC1412]
 gi|291470957|gb|EFF13441.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298278721|gb|EFI20235.1| osmoprotectant transport system permease [Escherichia coli
           FVEC1302]
 gi|300355328|gb|EFJ71198.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300398287|gb|EFJ81825.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 243

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALLFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIIV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDVSVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++       +  +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIIVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDVSVTEVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|116494445|ref|YP_806179.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|227535591|ref|ZP_03965640.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239631194|ref|ZP_04674225.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301065955|ref|YP_003787978.1| phosphate ABC transporter permease [Lactobacillus casei str. Zhang]
 gi|116104595|gb|ABJ69737.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Lactobacillus casei ATCC 334]
 gi|227186721|gb|EEI66788.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane-spanning subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239525659|gb|EEQ64660.1| ABC-type phosphate transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300438362|gb|ADK18128.1| ABC-type phosphate transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   +L AM+IS   +          AK   L  V+   ++I+ S+P +    F  +
Sbjct: 62  LFNSFYLLLLAMLISTPISLGAGIYLSEYAKKNWLTDVIRTSIEILSSLPSVVVGLFGFL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +  K   + L+   A+    +  +T ++  SL  +  +  E   +  LS W+   
Sbjct: 122 IFVLQF--KFGFSILSGALALTVFNLPLLTRNVEDSLRGVEYEQREAGLALGLSRWETVL 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
           ++ +P ++PG++  M++   
Sbjct: 180 HVVIPEALPGIITGMILGAG 199



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 21/184 (11%)

Query: 352 VCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
           +  +   I +Q + +I  HF  +            I +F    L+++A +I  P+ +  G
Sbjct: 25  LASLLGYILFQGLPHISWHFLTSPAQSFEAGGGIGIQLFNSFYLLLLAMLISTPISLGAG 84

Query: 410 FR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
                      ++  I+   ++L++ P+     +VV    +            ++ G   
Sbjct: 85  IYLSEYAKKNWLTDVIRTSIEILSSLPS-----VVVGLFGFLIFVLQFKFGFSILSGALA 139

Query: 463 YILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             +FN+        +  +       E   +  ++ W    ++++P   P  +TG I   G
Sbjct: 140 LTVFNLPLLTRNVEDSLRGVEYEQREAGLALGLSRWETVLHVVIPEALPGIITGMILGAG 199

Query: 516 GAWN 519
             + 
Sbjct: 200 RVFG 203


>gi|260430661|ref|ZP_05784633.1| phosphate ABC transporter, permease protein PstA [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418102|gb|EEX11360.1| phosphate ABC transporter, permease protein PstA [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 434

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 51/150 (34%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPIL 113
           ++  L      +   +     IS       A    +      +   I   ++ + ++P +
Sbjct: 208 ELAGLKGALIGSFWALFVCFAISFPLGIGAAIYLEEFAPRNKISDFIEVNINNLAAVPSV 267

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+  +        +  +  +    +  +  +   +L  +P  + E +    
Sbjct: 268 VFGLLALAVFIGWFGLPRSAPFVGGL-TLALMTMPTIIIATRAALKAVPPSIREAALGIG 326

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  +   +P +MPG++   ++ ++  
Sbjct: 327 ASKHQVVFGHVLPLAMPGILTGTIIGLAQA 356



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 9/187 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIA 397
           R     +I WF  +    +     + G I N  + + ++  +      + + + V   I+
Sbjct: 171 RRLKDHEIAWFDQLKAKGVISKPLNTGLITNADSRFPELAGLKGALIGSFWALFVCFAIS 230

Query: 398 SIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNL 450
             + I   I++     R  IS  I+     LAA P+ VF      + +         P +
Sbjct: 231 FPLGIGAAIYLEEFAPRNKISDFIEVNINNLAAVPSVVFGLLALAVFIGWFGLPRSAPFV 290

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L +  T   I+    A   A P   +E A     +  +     +LP   P  +TG 
Sbjct: 291 GGLTLALM-TMPTIIIATRAALKAVPPSIREAALGIGASKHQVVFGHVLPLAMPGILTGT 349

Query: 511 ITACGGA 517
           I     A
Sbjct: 350 IIGLAQA 356


>gi|302550207|ref|ZP_07302549.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
 gi|302467825|gb|EFL30918.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
          Length = 235

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 17/199 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPILGFLTFT 119
           T   +  + +I+++       L   + R           V+  +++I +S+P    L   
Sbjct: 17  TLYMVGWSTLIAVVGGLPLGILLVLTDRGGLLQNLAANKVIGQVVNIARSLP-FIILMVA 75

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F     G  IG E AAI  +    +      +  ++  +   L E  +S   + W  
Sbjct: 76  LMGFTRSITGTTIGRE-AAIVPLAIGAIPFFARLVETAVREVDHGLVEAVQSMGGNTWTI 134

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + VP S+P L       +S     +VA          +   G+G        ++   
Sbjct: 135 VRKVLVPESLPSL-------ISSTTTTIVALIGYSAMAGTVGAGGLGDIAIRYGYQRFET 187

Query: 240 AILYAMLTMLGVIFLYDQL 258
            +++  + +L V+    Q 
Sbjct: 188 QLMWITVAILAVVISVIQF 206



 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 68/214 (31%), Gaps = 20/214 (9%)

Query: 371 FTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPF 421
            T+ ++  ++   C  T++ V    +IA +  +P+GI +              +  I   
Sbjct: 1   MTWSEMQPLLEQACWDTLYMVGWSTLIAVVGGLPLGILLVLTDRGGLLQNLAANKVIGQV 60

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLW---LSLLMIFGTQWYILFNVIAGASAFPND 478
             +  + P  +   + +   +       +      + +  G   +    V        + 
Sbjct: 61  VNIARSLPFIILM-VALMGFTRSITGTTIGREAAIVPLAIGAIPFFARLVETAVREVDHG 119

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E   S     W   R +++P   P  ++   T        S ++     G       G
Sbjct: 120 LVEAVQSMGGNTWTIVRKVLVPESLPSLISSTTTTIVALIGYSAMAGTVGAG-------G 172

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           LG        +    +++   + +   V+++ +F
Sbjct: 173 LGDIAIRYGYQRFETQLMWITVAILAVVISVIQF 206


>gi|331269702|ref|YP_004396194.1| phosphate ABC transporter inner membrane subunit PstC [Clostridium
           botulinum BKT015925]
 gi|329126252|gb|AEB76197.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           botulinum BKT015925]
          Length = 297

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 67/155 (43%), Gaps = 5/155 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPIL--GFLTFTVVY- 122
           + L +L ++++S   +   A        +    +L P +++   IP +  G+L  TV+  
Sbjct: 80  SILVVLGSIIVSTPLSIALAIFINVISPKMGEKILKPAMELFVGIPSVVYGWLGITVLIP 139

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +    G V    LA+I  +    +  +T     ++  IP+   E S     + WQ    
Sbjct: 140 MLKGVFGGVGFGLLASIIVLSIMILPTITSISSDAVKAIPKRYIEASYGLGATRWQTIIK 199

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + +P +  G++  +++ M+  +   +A +M++   
Sbjct: 200 VIIPSAKSGILTAIVLGMARAFGEALAVQMVIGNS 234



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 9/181 (4%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-GFRPHI-SSKIQP 420
            +  I N  +       I     ++  V+  II+++ + I + I+I    P +    ++P
Sbjct: 57  LLSTIWNPESKSPQFGAIIFLVGSILVVLGSIIVSTPLSIALAIFINVISPKMGEKILKP 116

Query: 421 FAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVI-AGAS 473
             +L    P+ V+  L ++ +       +  +   L  S++++       + ++      
Sbjct: 117 AMELFVGIPSVVYGWLGITVLIPMLKGVFGGVGFGLLASIIVLSIMILPTITSISSDAVK 176

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P  + E +     T W+    +I+P      +T  +     A+  ++  ++     I 
Sbjct: 177 AIPKRYIEASYGLGATRWQTIIKVIIPSAKSGILTAIVLGMARAFGEALAVQMVIGNSIK 236

Query: 534 L 534
           L
Sbjct: 237 L 237


>gi|317152750|ref|YP_004120798.1| phosphate ABC transporter inner membrane subunit PstA
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943001|gb|ADU62052.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 386

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 59/135 (43%), Gaps = 8/135 (5%)

Query: 76  MVISLLFTFVYATLAAK-------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           ++I+ LF+F    + A        + R+  V+   ++ + +IP + F    +  F+N + 
Sbjct: 175 LIITFLFSFPTGVMTAIYLEEFAPNNRIMQVIEVNINNLAAIPSILFGLLGLSIFINFF- 233

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + LA    +    +  +  S   ++  +P  + E S +   + WQ      +P S
Sbjct: 234 GVPRSSALAGGLTLALMTLPVIIISTRAAIRAVPDSIREGSLALGATRWQMVLTNVLPLS 293

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++   ++ ++  
Sbjct: 294 LPGILTGTIIGLAQA 308



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFP 429
             ++  +      +M+ +++  + +    +   I++        I   I+     LAA P
Sbjct: 158 LPEMAGIWAAAVGSMYVLIITFLFSFPTGVMTAIYLEEFAPNNRIMQVIEVNINNLAAIP 217

Query: 430 ANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +F  L +S    +   P    L   L +   T   I+ +  A   A P+  +E + + 
Sbjct: 218 SILFGLLGLSIFINFFGVPRSSALAGGLTLALMTLPVIIISTRAAIRAVPDSIREGSLAL 277

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+     +LP   P  +TG I     A                L   G+ AYI ++
Sbjct: 278 GATRWQMVLTNVLPLSLPGILTGTIIGLAQA----------IGETAPLLIVGMMAYIPDA 327


>gi|237738426|ref|ZP_04568907.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420306|gb|EEO35353.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 245

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 21/233 (9%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLIIIASIIW 401
           F+F +  GVA+ I    +   V+                 +   T+ R  + I+ + I+ 
Sbjct: 12  FFFIIWEGVALYIDNSLLFPRVSEIFLSLKNLVASGDFTLILWNTLSRFFISIVFSLILA 71

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           I   +       I   + PF   L A P      +V+   S   +   + + +L      
Sbjct: 72  IIFSVASYRYEVIGFLLFPFIIFLRAVPTIAIIIVVLIWSSVEKVPIVVGVLIL------ 125

Query: 462 WYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           + IL+ +++ G      +  +++  F +   R  R I +P I+    +   +  G  +  
Sbjct: 126 FPILYESILGGIKNVDKNLLKMSKVFKVPTKRVVRDIYIPSIYYSISSNIPSYMGLTFKV 185

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
            I  EV S   +      +G  I  +        +   +++    V+ LN FL
Sbjct: 186 IIAGEVLSQESLS-----IGGEIFINKIYLESSNIFAWIIV----VIVLNYFL 229



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 85/238 (35%), Gaps = 13/238 (5%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P    +  F ++   + + +          +I   +   +           T  R   ++
Sbjct: 5   PKFLSMFFFFIIWEGVALYIDNSLLFPRVSEIFLSLKNLVASGDFTLILWNTLSRFFISI 64

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           V SL+   +++  + +   +G +L P +  ++++P +  +   +++            E 
Sbjct: 65  VFSLILAIIFSVASYRYEVIGFLLFPFIIFLRAVPTIAIIIVVLIW---------SSVEK 115

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             I          +  S+   + N+ ++L ++S+ F++   +    + +P     +  N+
Sbjct: 116 VPIVVGVLILFPILYESILGGIKNVDKNLLKMSKVFKVPTKRVVRDIYIPSIYYSISSNI 175

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              M   +  ++A E++      I     G      I  +      + ++ ++   FL
Sbjct: 176 PSYMGLTFKVIIAGEVLSQESLSIG----GEIFINKIYLESSNIFAWIIVVIVLNYFL 229


>gi|104773976|ref|YP_618956.1| phosphate ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116513983|ref|YP_812889.1| ABC-type phosphate transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|103423057|emb|CAI97760.1| Phosphate ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|116093298|gb|ABJ58451.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325125671|gb|ADY85001.1| Phosphate ABC transporter, permease protein, putative
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 291

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT-MFRV 390
           +   +R   ++   ++ +   +   + + ++  I +       D L     G     F  
Sbjct: 1   MSRAKRKDRLMTGIFYAIGWIMLAFLLYLTLTIIFDGLKGFQWDFLGAAGNGIFNQFFNT 60

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCV 441
           + L+ ++ ++ +P+GI  G             +  +   + L++ P+ V   F  +   +
Sbjct: 61  IYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFII 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L  +L +   +   I         A P ++KE +     T     R +++P 
Sbjct: 121 WTGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVLIPA 180

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             P  +TG I A G  +  +      S    ++
Sbjct: 181 AMPQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L      ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    LA    I    +  +T     ++  +P + +E S     +  +    + 
Sbjct: 120 IW--TGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|325121928|gb|ADY81451.1| D-and L-methionine transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 219

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTVDTLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|299537692|ref|ZP_07050981.1| phosphate ABC transporter, permease protein PstA [Lysinibacillus
           fusiformis ZC1]
 gi|298726671|gb|EFI67257.1| phosphate ABC transporter, permease protein PstA [Lysinibacillus
           fusiformis ZC1]
          Length = 292

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 60/150 (40%), Gaps = 5/150 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           D   +      +   M     +S++     A      AK  ++   +   +  +  +P +
Sbjct: 67  DKAGIKAALIGSLWLMAVVAPVSIILGVGTAIYLEEYAKKNKINDFIRMNISNLAGVPSI 126

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+ +   ++  + LAA F +    +  +  +  +++  +P +  E S    
Sbjct: 127 VFGLLGLTIFVRMM--ELGKSILAAGFTMSLLILPVIIVAAQEAIRAVPNEQREASYGMG 184

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + WQ    + +P ++PG++   ++++S  
Sbjct: 185 ATKWQTILRVVLPAAIPGILTGSILALSRA 214



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 6/194 (3%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
              +       ++ L      +   V  GI + +I ++ N  + + D   +      +++
Sbjct: 21  KVWKTLFFLATTFALVTLAVLLYRIVTQGIDYLNIDFLTNFASRFADKAGIKAALIGSLW 80

Query: 389 RVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
            + V+  ++ I+ +   I++     +  I+  I+     LA  P+ VF    L +     
Sbjct: 81  LMAVVAPVSIILGVGTAIYLEEYAKKNKINDFIRMNISNLAGVPSIVFGLLGLTIFVRMM 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L     M       I+        A PN+ +E +     T W+    ++LP   
Sbjct: 141 ELGKSILAAGFTMSLLILPVIIVAAQEAIRAVPNEQREASYGMGATKWQTILRVVLPAAI 200

Query: 504 PYYVTGAITACGGA 517
           P  +TG+I A   A
Sbjct: 201 PGILTGSILALSRA 214


>gi|190894469|ref|YP_001984762.1| putative sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700130|gb|ACE94212.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
 gi|327188234|gb|EGE55454.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 271

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   SA +++L+         A+ +     +  ++ I +  P L FL    + F
Sbjct: 69  YLWNSLLVTGSATLLALVIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLF 126

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +  ++     +    V  +    ++     P +LEE +     + WQ F  +
Sbjct: 127 QWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFE---TTPMELEEAASIDGATPWQVFRLV 183

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 184 ALPIARPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 241

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      R ++ 
Sbjct: 242 AALIVTLPVLILTVFAQRQIVA 263



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 73  SLLVTGSATLLALVIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLFQWLN 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   L   +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 131 LLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 191 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 248

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 249 PVLILTVFAQR 259


>gi|329954294|ref|ZP_08295388.1| ABC transporter, permease protein [Bacteroides clarus YIT 12056]
 gi|328528000|gb|EGF54986.1| ABC transporter, permease protein [Bacteroides clarus YIT 12056]
          Length = 266

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 95/265 (35%), Gaps = 22/265 (8%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHS 60
            L  +   F+ RR +   + L   + VI  ++ I+L+   +        +     +   +
Sbjct: 1   MLNKLSSFFMRRRNWTVPYALFLLIFVIVPLLLIVLYAFTDADGAFTFANFRKFMMHPEA 60

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      +    +   +  LL  +  A + ++ +          +  Q++ +L  L   V
Sbjct: 61  M-NTFVYSIGIAIITTLACLLLGYPAAYILSQRQ---------FNTSQTMVVLFILPMWV 110

Query: 121 VYFMNLYPGKVIGAEL-------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
              +       +   L       A +F +  + +  M + +Y +L  +  +L E ++   
Sbjct: 111 NILIRTLATVALFDFLNLPLGEGALVFGMVYNFLPFMIYPIYNTLQKMDHNLIEAAQDLG 170

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +  Q F  + +P SMPG++  ++M           +E++ + +  +     G+ +   I
Sbjct: 171 ANPLQVFGKVILPLSMPGIMSGIVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENI 226

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL 258
                       L ML +I +    
Sbjct: 227 YNGMWNYGAALSLIMLLLIGVTILF 251



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 6/147 (4%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L+        F  +   +    L   +  + L       Y ++N +       ++  E A
Sbjct: 113 LIRTLATVALFDFLNLPLGEGALVFGMVYNFLPFMI---YPIYNTL---QKMDHNLIEAA 166

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   + +  +ILP   P  ++G +       +   ++E+ +  +I L  T +   I
Sbjct: 167 QDLGANPLQVFGKVILPLSMPGIMSGIVMVFMPTVSTFAIAELLTMNNIKLFGTTVQENI 226

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
                       ++ +L++   +L  N
Sbjct: 227 YNGMWNYGAALSLIMLLLIGVTILFTN 253


>gi|225017313|ref|ZP_03706505.1| hypothetical protein CLOSTMETH_01239 [Clostridium methylpentosum
           DSM 5476]
 gi|224949930|gb|EEG31139.1| hypothetical protein CLOSTMETH_01239 [Clostridium methylpentosum
           DSM 5476]
          Length = 441

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
           +   + ++L       L A        RR+  V+ P + ++  IP + +    +   +  
Sbjct: 224 IFGTLGAVLIGVPVGILTAVFLSETAPRRVAGVVRPAVQLLAGIPSVIYGFFGMLVLLPA 283

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++PG V  + LA I  +    +  +      +L  +P    E + +   +  +  + 
Sbjct: 284 IRAIFPGSVGESLLAVILILAIMVLPTIVSVSETALRAVPVSYREAAMALGTTPTKTIFK 343

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-DTVIPLPGIGSYIALAIKEQDLLAI 241
           + VP +  G++  +++ +       +A  M+      +  L G    +   I  +   + 
Sbjct: 344 VTVPAAKSGILAGVILGVGRAIGETMAVIMVAGNVANMPHLLGTVKLLTTGIAMEMSYST 403

Query: 242 LY---AMLTMLGVIFLYDQLL 259
                A+  +  V+F++  ++
Sbjct: 404 GLHRQALFAIGLVLFIFIMIV 424



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPA--------NVFFPL 436
           +   + A +I +PVGI             ++  ++P  QLLA  P+         V  P 
Sbjct: 224 IFGTLGAVLIGVPVGILTAVFLSETAPRRVAGVVRPAVQLLAGIPSVIYGFFGMLVLLP- 282

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWR 495
            +  +    +  +L   +L++       + +V   A  A P  ++E A +   T  +   
Sbjct: 283 AIRAIFPGSVGESLLAVILILAIMVLPTIVSVSETALRAVPVSYREAAMALGTTPTKTIF 342

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASW---------GHIHLRTTGLGAYIAES 546
            + +P      + G I   G A   ++   + +          G + L TTG+ A     
Sbjct: 343 KVTVPAAKSGILAGVILGVGRAIGETMAVIMVAGNVANMPHLLGTVKLLTTGI-AMEMSY 401

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +       +    L++  F++ +N   
Sbjct: 402 STGLHRQALFAIGLVLFIFIMIVNIAF 428


>gi|89054782|ref|YP_510233.1| phosphate ABC transporter permease [Jannaschia sp. CCS1]
 gi|88864331|gb|ABD55208.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Jannaschia sp. CCS1]
          Length = 457

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 56/161 (34%), Gaps = 4/161 (2%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVP 102
               D      +   L      +   M+  +V++L      +      A   RL  V+  
Sbjct: 210 ITWPDASGSRPEAAGLGVAIIGSLYMMIVVLVLALPIGVAASIYLEEFAPKNRLTDVIEV 269

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + ++P + +    +  F+N          +  +       +  +  +   SL  +P
Sbjct: 270 NISNLAAVPSIVYGILGLAVFINFMEFNQSSPLVGGLVLTL-MTLPTIIIATRASLRAVP 328

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             + + +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 329 PSIRQAALGLGASKMQSVFHHVLPLAMPGILTGTIIGLAQA 369



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 6/206 (2%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R  G  +        +   N  V+ +L          V I   W  I +     +  +  
Sbjct: 164 RIDGFFKGRVTMESAERDRNVSVNQLLLAQALAERGEVVIRFNWDFITWPDASGSRPEAA 223

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFF 434
            +      +++ ++V++++A  I +   I++     +  ++  I+     LAA P+ V+ 
Sbjct: 224 GLGVAIIGSLYMMIVVLVLALPIGVAASIYLEEFAPKNRLTDVIEVNISNLAAVPSIVYG 283

Query: 435 PLVVSCVSYY---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            L ++    +   + +  L   L++   T   I+    A   A P   ++ A     +  
Sbjct: 284 ILGLAVFINFMEFNQSSPLVGGLVLTLMTLPTIIIATRASLRAVPPSIRQAALGLGASKM 343

Query: 492 RWWRYIILPGIFPYYVTGAITACGGA 517
           +   + +LP   P  +TG I     A
Sbjct: 344 QSVFHHVLPLAMPGILTGTIIGLAQA 369


>gi|37524697|ref|NP_928041.1| DL-methionine transporter permease subunit [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784122|emb|CAE12991.1| D-methionine transport permease protein MetI [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 217

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T +    +     +       L          ++ +L   L  +++I +SIP 
Sbjct: 9   LAKGVWETLVMTFVSGFFGFIIGLPIGVLLYVTRPNQIMENSKLYRFLSAVVNIFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG + AAI  +       +   +  +L  IP  L E +R+ 
Sbjct: 68  FIILLVWMIPFTRLIVGTSIGLQ-AAIVPLTIGAAPFIARMVENALLEIPSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S +Q    + +P ++PGL+    +++
Sbjct: 127 GASPFQIIKKILLPEALPGLLNAATITL 154



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      II +P+G+         I     +   +     +  + P     V+ 
Sbjct: 16  TLVMTFVSGFFGFIIGLPIGVLLYVTRPNQIMENSKLYRFLSAVVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L I G   +I   V       P+   E A +   + ++  
Sbjct: 76  IPFTRLIVGTSIGLQAAIVPLTI-GAAPFIARMVENALLEIPSGLIEAARAMGASPFQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + I+LP   P  +  A          S +      G +       G     +T
Sbjct: 135 KKILLPEALPGLLNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|227889696|ref|ZP_04007501.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849741|gb|EEJ59827.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 302

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  ++I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGMTRSFAT 244



 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ ++I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGMTRSFATSLL 247


>gi|124028301|ref|YP_001013621.1| transporter [Hyperthermus butylicus DSM 5456]
 gi|123978995|gb|ABM81276.1| predicted transporter [Hyperthermus butylicus DSM 5456]
          Length = 292

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 81/257 (31%), Gaps = 20/257 (7%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---------YVI 380
               L         +   W   +  +        I Y     +  + L          + 
Sbjct: 32  RIHILKPRPAGRRGILAGWLIALASLGSIWFLAHILYPRQVPSPAEALAFLAGEGLWRIA 91

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           W   +T+ R ++         + +G      P     ++    ++ +    V+  ++V  
Sbjct: 92  WSTWLTLSRTLLGFAAGMAAALLLGYAYTLSPVAREAVRALNTVVQSVSVLVWIVILVML 151

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  P + ++ L+ F     I+ + I  G  +      E+A+       R +   +L
Sbjct: 152 FGVLSPVPPVAVAGLVAF----PIILSAIVSGLESVNPRLYELAAMLGAGRLRTYTDFLL 207

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P     A  A G A   S+V+E          + G+G  IA          V    
Sbjct: 208 PSLLPQLAGAARAALGAALRISVVAEAFG------SSGGIGYMIATYYSLAEPRGVFAWG 261

Query: 560 LIMCCFVLALNRFLWHP 576
           L++   ++ L++ +   
Sbjct: 262 LLLVALMVLLDKLVLER 278



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 16/270 (5%)

Query: 2   FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHS 60
            ++ + P    RR    +   L  +  +G I  L H +    VP             +  
Sbjct: 32  RIHILKPRPAGRRGI--LAGWLIALASLGSIWFLAHILYPRQVPSPAEALAFLAGEGLWR 89

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +      T  R L      +    +       S      +  +  ++QS+ +L ++   V
Sbjct: 90  IAWSTWLTLSRTLLGFAAGMAAALLLGYAYTLSPVAREAVRALNTVVQSVSVLVWIVILV 149

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F  L P   +       F I  S +          L ++   L E++        + +
Sbjct: 150 MLFGVLSPVPPVAVAGLVAFPIILSAI-------VSGLESVNPRLYELAAMLGAGRLRTY 202

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
               +P  +P L      ++       V +E            GIG  IA      +   
Sbjct: 203 TDFLLPSLLPQLAGAARAALGAALRISVVAEAFGSSG------GIGYMIATYYSLAEPRG 256

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
           +    L ++ ++ L D+L+   +     ++
Sbjct: 257 VFAWGLLLVALMVLLDKLVLERVEERVKRW 286


>gi|331085552|ref|ZP_08334636.1| phosphate ABC transporter [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330407439|gb|EGG86941.1| phosphate ABC transporter [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 291

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 79/209 (37%), Gaps = 16/209 (7%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60
           +  Y   P  +   +   +  +  F +++ +I  +L        P D+  +   + +   
Sbjct: 10  LRAYRRRPGSLILMLLVMLSAVATFAVLLFLIAYILIKGLPHLTP-DLFALKYTSENASL 68

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPI 112
           +P       L  +    +SL+        AA        +  +   ++    + +  IP 
Sbjct: 69  MPA-----LLNTIGMTALSLVIAVPLGIFAAIFLVEYAKRGNKFVEIIRLTTETLSGIPS 123

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + +  F +++F+         + LA  F +    +  +  +  ++L ++P    E S   
Sbjct: 124 IVYGLFGLLFFVTTLGWGY--SLLAGAFTLAIMILPLIIRTTEEALKSVPDSFREGSFGL 181

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  + + +P ++PG++  +++++ 
Sbjct: 182 GAGKLRTVFCVVLPSAVPGILAGVILAVG 210



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 64/197 (32%), Gaps = 18/197 (9%)

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--------MF 388
            +R   ++ +    +       +    I YI+          +  L   +        + 
Sbjct: 14  RRRPGSLILMLLVMLSAVATFAVLLFLIAYILIKGLPHLTPDLFALKYTSENASLMPALL 73

Query: 389 RVVVLIIIASIIWIPVGIWIGFR-----PHISSKIQPF---AQLLAAFPANVF--FPLVV 438
             + +  ++ +I +P+GI+            +  ++      + L+  P+ V+  F L+ 
Sbjct: 74  NTIGMTALSLVIAVPLGIFAAIFLVEYAKRGNKFVEIIRLTTETLSGIPSIVYGLFGLLF 133

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
              +       L  +  +       I+        + P+ F+E +        R    ++
Sbjct: 134 FVTTLGWGYSLLAGAFTLAIMILPLIIRTTEEALKSVPDSFREGSFGLGAGKLRTVFCVV 193

Query: 499 LPGIFPYYVTGAITACG 515
           LP   P  + G I A G
Sbjct: 194 LPSAVPGILAGVILAVG 210


>gi|300813033|ref|ZP_07093416.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|313123609|ref|YP_004033868.1| phosphate ABC transporter, permease pstc [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|300496003|gb|EFK31142.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|312280172|gb|ADQ60891.1| Phosphate ABC transporter, permease PstC [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|325686289|gb|EGD28328.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 302

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ ++I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFATSLL 247



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  ++I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244


>gi|290508581|ref|ZP_06547952.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
 gi|289777975|gb|EFD85972.1| osmoprotectant transport system permease [Klebsiella sp. 1_1_55]
          Length = 385

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 88  TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV-------YFMNLYPGKVIGAELA-AI 139
               +  R       +L+++Q+IP +      +        YF  L    V G  +A A+
Sbjct: 200 VWLWRRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPAL 259

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM-M 198
            A+    +  +   +   L  +P+D  E + +  +S  Q+F  + +P +MP L+ ++  +
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           S+      VVA+        +I   G G+ +   +    L  +L  ++  + +  + D L
Sbjct: 320 SVQTVGMAVVAA--------LIGAGGFGALVFQGLLSSALDLVLLGVVPTIALAVVVDAL 371

Query: 259 L 259
            
Sbjct: 372 F 372



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 19/180 (10%)

Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY------------HLNPNLWLS 453
           +W+  RP   +       ++   P+   F L+++ ++                       
Sbjct: 200 VWLWRRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLARYFPALGELGVSGTGMAPAL 259

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + +       ++  V+ G    P D  E A++  ++  + +R + LP   P  +      
Sbjct: 260 IALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRFRQVQLPLAMPVLLRSLRVV 319

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  ++V+ +   G       G GA + +     +   V+LGV+      + ++   
Sbjct: 320 SVQTVGMAVVAALIGAG-------GFGALVFQGLLSSALDLVLLGVVPTIALAVVVDALF 372


>gi|225626767|ref|ZP_03784806.1| maltose transport system permease protein MALG [Brucella ceti str.
           Cudo]
 gi|294851632|ref|ZP_06792305.1| multiple sugar transport system permease [Brucella sp. NVSL
           07-0026]
 gi|225618424|gb|EEH15467.1| maltose transport system permease protein MALG [Brucella ceti str.
           Cudo]
 gi|294820221|gb|EFG37220.1| multiple sugar transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 294

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 85  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 144 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 200 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 258

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 259 RGMCALAVVMIVPALALTFVIQKHLV 284



 Score = 38.8 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 96  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 155

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     + ++ +       P D  E A     T W+ +  +  P   P   +
Sbjct: 156 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 215

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 216 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 273

Query: 568 AL 569
           AL
Sbjct: 274 AL 275


>gi|39937707|ref|NP_949983.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|39651567|emb|CAE30089.1| probable ABC transporter permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 597

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 65/529 (12%), Positives = 158/529 (29%), Gaps = 34/529 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F+ ++ +I+++   I   +       +  + L   SL     RT    ++   + LL
Sbjct: 35  FLGFIYLLPLIDLIRISISGPSWLTYFQRVFAVPLYWESL----VRTMQISVTVAFLCLL 90

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQS-----IPILGFLTFT----------VVYFMNL 126
           F +  A L  +++ L   L+    ++       I    ++             V   +  
Sbjct: 91  FGYPTALLIHRTQGLTRALIATAIVLPYFIAILIRTYAWMVLLGRTGPVNKLLVAIGILG 150

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P +++      +  +    +  M  ++Y S+  +   L   + +        FW + +P
Sbjct: 151 EPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAALASGAGPIAVFWRVLLP 210

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++PG+    ++       F +   ++      +    I         E  L A+   +L
Sbjct: 211 LTLPGIGAGFLLVFVAAIGFFITPTLLGGPGDQMFAMHITQQADSVTSEGFLQALGVVLL 270

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            +   +            +W  + +L  +       +      R++          W   
Sbjct: 271 LITLAVVAIAGRFLGLEFIWGGR-KLTESNAASTTSTAADDSTRRSIGSSLADTIGWPVL 329

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             L      +      +        L L        ++ +  F     +       S+ +
Sbjct: 330 RLLGLLPAGVGTWTVRVMGGVVVAVLILP-----IVVVMVISFSSASYLTFPPPGFSLRW 384

Query: 367 IVNHFTYQDVLYVIW---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
               F+  + +   W   L  +    + V +   + + I  G   G    +   + P   
Sbjct: 385 YEQFFSDTNWMRAFWTSALIALVSAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPII- 443

Query: 424 LLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                P  V    L    + +  +     L+     G    ++  + A         ++ 
Sbjct: 444 ----VPPVVLGLSLYTLFLKFDLIGSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQA 499

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A+    +     R + LP I P        A   +++  +++   S   
Sbjct: 500 AAVHGASSLTVLRLVTLPAIAPGLAAATFFAFLHSFDELVLTLFLSSAQ 548


>gi|227874222|ref|ZP_03992422.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227839930|gb|EEJ50360.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 231

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              ++  + +  KV+ + L  + A     +  M  +   S   +P+DL +V R+  LS  
Sbjct: 81  PVGIFLFSHFGIKVVQSFLGCVLAATVISLPLMYRNAKASFALVPKDLVQVGRTLGLSET 140

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + FW + +P S PG++   ++S +       A+ M+  G+       I   IAL +++QD
Sbjct: 141 KIFWKIILPLSGPGILSGAVLSFARALGEYGATSMLA-GNIPGKTATISQRIALVMQDQD 199

Query: 238 L-LAILYAMLTMLGVIFLYDQL 258
              A ++  + ML  +F    L
Sbjct: 200 YVTAGVWVGVVMLISLFCMTAL 221



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 4/138 (2%)

Query: 435 PLVVSCVSYYHL---NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
           P+ +   S++ +      L   L     +   +  N  A  +  P D  +V  +  ++  
Sbjct: 81  PVGIFLFSHFGIKVVQSFLGCVLAATVISLPLMYRNAKASFALVPKDLVQVGRTLGLSET 140

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           + +  IILP   P  ++GA+ +   A      + + + G+I  +T  +   IA   +   
Sbjct: 141 KIFWKIILPLSGPGILSGAVLSFARALGEYGATSMLA-GNIPGKTATISQRIALVMQDQD 199

Query: 552 FPEVVLGVLIMCCFVLAL 569
           +    + V ++    L  
Sbjct: 200 YVTAGVWVGVVMLISLFC 217


>gi|225573410|ref|ZP_03782165.1| hypothetical protein RUMHYD_01602 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039220|gb|EEG49466.1| hypothetical protein RUMHYD_01602 [Blautia hydrogenotrophica DSM
           10507]
          Length = 277

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 19/207 (9%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPI 112
           ++  + +    T    + +++ SL F  ++  LAAK       L ++       ++++P 
Sbjct: 79  NMSVIGEAMLETVSIAVLSLLYSLGFGVIFGMLAAKYIFRLPWLSVITQSFFTFLRAVPT 138

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
             ++   +V          +G E         +  +  T S  QS  +I  +  E   + 
Sbjct: 139 PVWVLLMMVCLG-------MGPEAGVAGLCVHTTAF-FTKSFAQSFESISEETVEALEAV 190

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S    F    +P +   +V     + +G       SE  V+G  ++   GIG  I+  
Sbjct: 191 GTSRLSIFTNAVLPAAFSQIV-----AWTGMRLETNFSECAVLG--MVGAGGIGFVISRN 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++  +      A+L +  V +  +++ 
Sbjct: 244 LQSYEYGTAGTAILLVFVVAYAIERMF 270



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 81/255 (31%), Gaps = 34/255 (13%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW---------------LGC 384
            + ++ IF    V      + +  I +I       D+  V W                  
Sbjct: 29  RNRLVPIFLVATVVLTVASLFYLQIDWIKLLSRVPDIGGVFWELGHLDFANMSVIGEAML 88

Query: 385 ITMFRVVVLIIIASIIWIPVGIW----IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
            T+   V+ ++ +    +  G+     I   P +S   Q F   L A P  V+   V+  
Sbjct: 89  ETVSIAVLSLLYSLGFGVIFGMLAAKYIFRLPWLSVITQSFFTFLRAVPTPVW---VLLM 145

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    + P   ++ L +  T ++   +      +   +  E   +   +    +   +LP
Sbjct: 146 MVCLGMGPEAGVAGLCVHTTAFFTK-SFAQSFESISEETVEALEAVGTSRLSIFTNAVLP 204

Query: 501 GIFPYYV--TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             F   V  TG       +  A +           +   G+G  I+ + +   +      
Sbjct: 205 AAFSQIVAWTGMRLETNFSECAVLG---------MVGAGGIGFVISRNLQSYEYGTAGTA 255

Query: 559 VLIMCCFVLALNRFL 573
           +L++     A+ R  
Sbjct: 256 ILLVFVVAYAIERMF 270


>gi|169796229|ref|YP_001714022.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184157842|ref|YP_001846181.1| metal ion ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|213157037|ref|YP_002319082.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii AB0057]
 gi|215483684|ref|YP_002325905.1| D-methionine transport system permease protein metI [Acinetobacter
           baumannii AB307-0294]
 gi|301346800|ref|ZP_07227541.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii AB056]
 gi|301511724|ref|ZP_07236961.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii AB058]
 gi|301596978|ref|ZP_07241986.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii AB059]
 gi|332855473|ref|ZP_08435893.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6013150]
 gi|332866630|ref|ZP_08437117.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6013113]
 gi|332872483|ref|ZP_08440453.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6014059]
 gi|169149156|emb|CAM87035.1| D-and L-methionine transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183209436|gb|ACC56834.1| ABC-type metal ion transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|213056197|gb|ACJ41099.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii AB0057]
 gi|213987548|gb|ACJ57847.1| D-methionine transport system permease protein metI [Acinetobacter
           baumannii AB307-0294]
 gi|322508157|gb|ADX03611.1| metI [Acinetobacter baumannii 1656-2]
 gi|323517731|gb|ADX92112.1| ABC-type metal ion transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
 gi|332727447|gb|EGJ58877.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6013150]
 gi|332734504|gb|EGJ65617.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6013113]
 gi|332739289|gb|EGJ70146.1| D-methionine transport system permease protein MetI [Acinetobacter
           baumannii 6014059]
          Length = 219

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTIDTLLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|241113534|ref|YP_002973369.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861742|gb|ACS59408.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 271

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++LL         A+ +     +  ++ I +  P L FL    + F
Sbjct: 69  YLWNSVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLF 126

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L    ++G  L  I       V  + + M       P +LEE +     + WQ F  +
Sbjct: 127 QWL---NLLGTLLPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLV 183

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 184 ALPIARPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 241

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      R ++ 
Sbjct: 242 AALIVTLPVLILTVFAQRQIVA 263



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 73  SVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLFQWLN 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   L   +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 131 LLGTLLPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 191 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 248

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 249 PVLILTVFAQR 259


>gi|331006820|ref|ZP_08330080.1| Phosphate transport system permease protein PstA [gamma
           proteobacterium IMCC1989]
 gi|330419372|gb|EGG93778.1| Phosphate transport system permease protein PstA [gamma
           proteobacterium IMCC1989]
          Length = 429

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 54/140 (38%), Gaps = 6/140 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   +L  + +S       A      A K++    ++   ++ + ++P + F    +  F
Sbjct: 214 SFYLLLVTLALSFPIGIATAIYLEEYAPKNKW-TDLIEVNINNLAAVPSIIFGLLGLAIF 272

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +  + G      L   F +    +  +  S   S+  +P  + E +     S  Q   + 
Sbjct: 273 LAFF-GFPRSTPLVGGFVLTLMTLPTIIISSRASIKAVPPSIREAAYGLGSSKMQVTLHH 331

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P +MPG++   ++ ++  
Sbjct: 332 VLPLAMPGMLTGTIIGLAQA 351



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 78/231 (33%), Gaps = 24/231 (10%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFP 429
           + +   +      + + ++V + ++  I I   I++      +            LAA P
Sbjct: 201 HSEEAGIRGAVMGSFYLLLVTLALSFPIGIATAIYLEEYAPKNKWTDLIEVNINNLAAVP 260

Query: 430 ANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
           + +F      + ++   +    P +    ++   T   I+ +  A   A P   +E A  
Sbjct: 261 SIIFGLLGLAIFLAFFGFPRSTPLVG-GFVLTLMTLPTIIISSRASIKAVPPSIREAAYG 319

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG--------HIHLRTT 537
              +  +   + +LP   P  +TG I     A   S    +             +    T
Sbjct: 320 LGSSKMQVTLHHVLPLAMPGMLTGTIIGLAQALGESAPLLMIGMAAFIPEVPTGVSDPAT 379

Query: 538 GLGAYIAES---TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            L   I +     + G   +    +L++  F++ +N      L ++  R L
Sbjct: 380 ALPMQIFQWFRNADAGFSEKASAAILVLLMFLIVMNT-----LAVWARRRL 425


>gi|312882723|ref|ZP_07742460.1| ABC transporter, permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369684|gb|EFP97199.1| ABC transporter, permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 225

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILD 105
            +L+ + L      T   + +A ++  +       +   S+        RL   L  +++
Sbjct: 10  FSLNSNLLINATWETIYMVGAAGLVGFIVGIPLGVILHTSKKGGLLENTRLNKALGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALIEVPSGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P +MP ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIHKVLLPEAMPTIINSVTITL 162



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 59/193 (30%), Gaps = 20/193 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP--------HISSKIQPFAQLLAAFPANVF---- 433
           T++ V    ++  I+ IP+G+ +             ++  +     +  + P  V     
Sbjct: 24  TIYMVGAAGLVGFIVGIPLGVILHTSKKGGLLENTRLNKALGAVVNIGRSVPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P+   E A S   T  + 
Sbjct: 84  IPVTKLLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALIEVPSGLVEAAQSMGATPLQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  +           + S ++     G +          I     +    
Sbjct: 142 IHKVLLPEAMPTIINSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDVT 195

Query: 554 EVVLGVLIMCCFV 566
            + + V ++   V
Sbjct: 196 IMAVTVAMLIILV 208


>gi|257065479|ref|YP_003145151.1| phosphate ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256793132|gb|ACV23802.1| phosphate ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 285

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 6/183 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  VL+  I  I   G    T      +   +   +  LP     T   +L AMVI + 
Sbjct: 26  LVCLVLLFIIAYIFYRGFPGITSELLTTESSYVHDTIGILPN-ILNTLYIVLVAMVIVIP 84

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK+ RL  ++   ++ +  IP + F    ++ F+ L   K     L  
Sbjct: 85  LGVCAAVYLNEYAKNYRLVRLIGFAVETLTGIPSVIFGLVGMLAFIQLMGLK--AGILVG 142

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +SL  +P    E + +     W     + +P S+ G+V   ++
Sbjct: 143 GLTLVVMVLPTIISNTLESLKTVPDSYREGALALGSGKWHMIRTVVLPSSIDGIVTGCIL 202

Query: 199 SMS 201
           ++ 
Sbjct: 203 AVG 205



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 11/198 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--T 386
               +    + + Y   I    V+  +   I ++    I +     +  YV     I   
Sbjct: 8   ARKAKNAMLKGLVYAGGILVCLVLLFIIAYIFYRGFPGITSELLTTESSYVHDTIGILPN 67

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF-FPLVV 438
           +   + ++++A +I IP+G+              +   I    + L   P+ +F    ++
Sbjct: 68  ILNTLYIVLVAMVIVIPLGVCAAVYLNEYAKNYRLVRLIGFAVETLTGIPSVIFGLVGML 127

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           + +    L   + +  L +       +  N +      P+ ++E A +     W   R +
Sbjct: 128 AFIQLMGLKAGILVGGLTLVVMVLPTIISNTLESLKTVPDSYREGALALGSGKWHMIRTV 187

Query: 498 ILPGIFPYYVTGAITACG 515
           +LP      VTG I A G
Sbjct: 188 VLPSSIDGIVTGCILAVG 205


>gi|27381601|ref|NP_773130.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354769|dbj|BAC51755.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 518

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 21/213 (9%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ 111
           +  LP Y        L+A+ + L  +   A L         +L+ +  I+Q++P      
Sbjct: 13  LSHLPDYLGNHVRVSLAALALGLAISLPLAILTRNRPAPRGILLALASIVQTVPGLALLA 72

Query: 112 -----ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                +L   + T+ +F   +        L A+ A+    +  +  +    L  I   L 
Sbjct: 73  LFYPLLLAAASLTLAWFGISFSA---FGFLPAMLALALYSMLPVLRNGITGLNGIDPALI 129

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +    ++  Q    + +P ++P ++  +  +    W    A+    +G T      +G
Sbjct: 130 EAAEGVGMTARQSLVLVELPLALPVMMAGIRTA--AVWVIGTATLSTPIGQTS-----LG 182

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +YI   ++ Q+ + +L+  L    +    DQLL
Sbjct: 183 NYIFAGLQTQNWVFVLFGCLASALLALAVDQLL 215



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 32/226 (14%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425
           +     + + L  +        RV +  + +   I +P+ I    RP     +   A ++
Sbjct: 3   LFTDPRWGEALSHLPDYLGNHVRVSLAALALGLAISLPLAILTRNRPAPRGILLALASIV 62

Query: 426 AAFP------------------ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
              P                     +F +  S   +      L   L +   +   +L N
Sbjct: 63  QTVPGLALLALFYPLLLAAASLTLAWFGISFSAFGF------LPAMLALALYSMLPVLRN 116

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            I G +       E A    +T  +    + LP   P  + G  TA    W     +   
Sbjct: 117 GITGLNGIDPALIEAAEGVGMTARQSLVLVELPLALPVMMAGIRTAA--VWVIGTATLST 174

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             G        LG YI    +  ++  V+ G L      LA+++ L
Sbjct: 175 PIGQTS-----LGNYIFAGLQTQNWVFVLFGCLASALLALAVDQLL 215


>gi|24636876|sp|Q8RQL4|GLUD_COREF RecName: Full=Glutamate transport system permease protein gluD
 gi|20126700|dbj|BAB88901.1| gluD [Corynebacterium efficiens]
          Length = 277

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 84/217 (38%), Gaps = 21/217 (9%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-----PILDIMQSI 110
           LD  +   Y        L A V S+L   +  TL    R   + L+      I++  ++I
Sbjct: 20  LDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIRLLRWFCGIIIETFRAI 79

Query: 111 PILGFLTFTVVYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           P+L  + F    F    L P + + A  A +F +       +   +   + ++P+   E 
Sbjct: 80  PVLILMIFAYQLFARYQLVPSRQL-AFAAVVFGLTMYNGSVIAEILRSGIASLPKGQREA 138

Query: 169 SRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           + +  +S  Q  W + +P +    +P L+  M++++         +    +G   +   G
Sbjct: 139 AIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDS------ALGYQIGYIEVVRSG 192

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           I S    ++    L A+    + M+ + F    L  R
Sbjct: 193 IQS---ASVNRNYLAALAVVAVIMILINFALTALAER 226



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 19/207 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           T+   V  I++A I+   +G+  I     +        +   A P  +         + Y
Sbjct: 36  TLKAAVASILLALIMGTLLGLGRISEIRLLRWFCGIIIETFRAIPVLILMIFAYQLFARY 95

Query: 445 HLNPNLWLSLL-MIFGTQWY----ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            L P+  L+   ++FG   Y    I   + +G ++ P   +E A +  ++  +    I+L
Sbjct: 96  QLVPSRQLAFAAVVFGLTMYNGSVIAEILRSGIASLPKGQREAAIALGMSTRQTTWSILL 155

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P      +   I     A   S +      G+I +  +G    I  ++   ++   +  +
Sbjct: 156 PQAVAAMLPALIAQMVIALKDSALG--YQIGYIEVVRSG----IQSASVNRNY---LAAL 206

Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLR 586
            ++   ++ +N      L     R  R
Sbjct: 207 AVVAVIMILINFA----LTALAERIQR 229


>gi|300718412|ref|YP_003743215.1| polyamine ABC transporter permease [Erwinia billingiae Eb661]
 gi|299064248|emb|CAX61368.1| Putative polyamine ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 595

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 75/522 (14%), Positives = 154/522 (29%), Gaps = 39/522 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPI--------LDIMQSI 110
              T    L   V+ L+  +  A   +      + R + ++L+P            +  +
Sbjct: 79  MLNTFTIALQTTVVCLVIGYPVAYWLSQRTETVRRRLMWLILLPFWTSALLKNFAWLVLL 138

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
              G L+  ++      P  V+      +FA+  S +     +M  ++  I   L +   
Sbjct: 139 SRRGILSEILLSLGADQPLNVLYTRGVVVFAMAHSMLPLAIITMLPTMTGIDNGLMKAGH 198

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW +  P SMPG+V   ++   G   F +   ++      +    IG  + 
Sbjct: 199 TLGASKAQSFWRIFFPLSMPGVVAACLLIFIGSLGFFITPALLGSPQDSV----IGQLLI 254

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR 290
             +++     +  A+  ML V  L     +  +   S     E                 
Sbjct: 255 TQVQQLLNWRLAGAVAMMLLVTTLIVCFCYDKLFGMSAISGGESHASGK----------- 303

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVK-KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
               +R +GY+     + + + +   L    G   F +      +     +   +  F  
Sbjct: 304 ---LIRRVGYAITAVLARVCDGLATGLAVIPGRPGFGWLLPLFSILVMLVLVSPVVSFLP 360

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                 +          +    TY +          +    +V  I + +I       + 
Sbjct: 361 MAFSSSSFLQFPPPGYSLRWMETYLESPIWTGATIRSFGIALVTGIFSVLISGAAAFGLA 420

Query: 410 FRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                S  +     LL     N+     L     +   +  +L + L         +   
Sbjct: 421 KHQGKSGSLVVMTFLLPMIIPNIVTAVSLFYLFATLGLIGSDLGIILGHTVMAIPVVFII 480

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           ++     +     + A +   + WR  R I LP I    V   I     ++    V+   
Sbjct: 481 ILTTFKGYDWRLDQAAGTLGASRWRTLREITLPLIKSSLVAAFIFGFLNSFEELTVALFV 540

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             G        L   + +       P +    +I+   V  L
Sbjct: 541 GGGVKQT----LPKQMWDDVLLSVTPTLAAASVIILSVVTLL 578


>gi|302560413|ref|ZP_07312755.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302478031|gb|EFL41124.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 291

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 10/229 (4%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           + ++++++       ++                N  +   V   +W         V+   
Sbjct: 50  TWRKLTFLPVALIVLLLATWIWFEQADLDALTRNALSNGQVSKALWQHIELT---VISTF 106

Query: 396 IASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
              II IP+GI +  R     +     FA +  A PA     L+V  +        + + 
Sbjct: 107 FVLIIAIPLGILLTRRTFRRATPAAMAFANMGQATPAIGLLALLVIWLGIGRRAALIGII 166

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
              +      +L N IAG  A      E A    ++       + LP   P  + G  TA
Sbjct: 167 AYAVL----PVLANTIAGLKANDPTLLEAARGIGMSPMGVLTRVELPLAVPLILAGVRTA 222

Query: 514 CGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
                  A++ +     G   L TTG+ +        GS   V L +L+
Sbjct: 223 LVLNVGTATLATFGGGGGLGVLITTGITSQRMPVLVLGSVLTVALALLV 271



 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 12/183 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L F+ V  I+ +L   I       D +      L    + +   +     + +    
Sbjct: 51  WRKLTFLPVALIVLLLATWIWFEQADLDALTRNA--LSNGQVSKALWQHIELTVISTFFV 108

Query: 80  LLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           L+       L  +   RR     +   ++ Q+ P +G L   V++        +IG    
Sbjct: 109 LIIAIPLGILLTRRTFRRATPAAMAFANMGQATPAIGLLALLVIWLGIGRRAALIGIIAY 168

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+  +          +    L      L E +R   +S       + +P ++P ++  + 
Sbjct: 169 AVLPVLA--------NTIAGLKANDPTLLEAARGIGMSPMGVLTRVELPLAVPLILAGVR 220

Query: 198 MSM 200
            ++
Sbjct: 221 TAL 223


>gi|148272884|ref|YP_001222445.1| putative glycine/betaine/choline ABC transporter permease
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147830814|emb|CAN01755.1| putative glycine/betaine/choline ABC transporter, permease
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 255

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 13/220 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
             L      +   +   + W ++  +     T  +   +       +        I  +I
Sbjct: 19  RGLIAQPVAIAAVLGAYLVWLAVAPLTAVERTTLEPAALGRSTLEHLVLTFSAAAIVLVI 78

Query: 401 WIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
            +P+G+ +  G     S+ +   A    A PA     L+   ++      +L   +L   
Sbjct: 79  AVPLGVLLTRGRFRGYSAPVLAVANFGQAAPAIGLVVLLSMVMTGSGFTASLVALVLY-- 136

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                +L N + G         E      +        I LP   P  + G  TA     
Sbjct: 137 -AALPVLRNTMIGIRGVDERLVEAGRGMGMNRASVLFRIELPLAVPVMLAGIRTALVLLV 195

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             + ++   + G       GLG  I        +P +V G
Sbjct: 196 GTAALAAFVNGG-------GLGVLITTGVSLYLYPVLVSG 228



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA- 90
           I  +L           +  +   TL+  +L +      +   SA  I L+       L  
Sbjct: 28  IAAVLGAYLVWLAVAPLTAVERTTLEPAALGRSTLEHLVLTFSAAAIVLVIAVPLGVLLT 87

Query: 91  -AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
             + R     ++ + +  Q+ P +G +    +               A++ A+       
Sbjct: 88  RGRFRGYSAPVLAVANFGQAAPAIGLVVLLSMVMTGSG-------FTASLVALVLYAALP 140

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +  +    +  +   L E  R   ++     + + +P ++P ++  +  ++        A
Sbjct: 141 VLRNTMIGIRGVDERLVEAGRGMGMNRASVLFRIELPLAVPVMLAGIRTAL--VLLVGTA 198

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +    V        G+G  I   +       ++   L +  +    D L
Sbjct: 199 ALAAFVNG-----GGLGVLITTGVSLYLYPVLVSGALLISLLALAIDWL 242


>gi|116513982|ref|YP_812888.1| ABC-type phosphate transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116093297|gb|ABJ58450.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 302

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPFAQLLAAFPANVF--------FP 435
           ++   ++ ++I     I   +++    P I     +P  ++  + P+ V+         P
Sbjct: 83  SLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVP 142

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
           ++ +         ++  + +++    +  +  V A    + PN ++E A     T W+  
Sbjct: 143 IIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVI 202

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             ++LP      +TG +     A   ++   +         T+ L
Sbjct: 203 GKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFATSLL 247



 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L  ++I L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLT 138

Query: 122 YFM-----NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +       +P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGKTRSFAT 244


>gi|313891972|ref|ZP_07825573.1| D-methionine transport system permease protein MetI [Dialister
           microaerophilus UPII 345-E]
 gi|313119615|gb|EFR42806.1| D-methionine transport system permease protein MetI [Dialister
           microaerophilus UPII 345-E]
          Length = 217

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL--------GMVLVPILDIMQSIPI 112
           L +  + T   +  + ++S +       L   + +            L  I++I++SIP 
Sbjct: 9   LFKSLAETLYMLFVSSLLSAVIGIPLGILLVVTEKGKILSCSFCNKPLSFIVNIIRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++    +  G  IG   AAI  +  + +      +  S+  IP  L E ++S 
Sbjct: 68  FIILMVAIIPITRMIAGTSIGTN-AAIIPLTIASIPYTARLIETSVREIPVGLIEAAKSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S  Q    + +P ++P ++ N+
Sbjct: 127 GASPLQIIKKVIIPEALPSMIENI 150



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 50/147 (34%), Gaps = 12/147 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPA 430
           +      T++ + V  +++++I IP+GI +              +  +     ++ + P 
Sbjct: 9   LFKSLAETLYMLFVSSLLSAVIGIPLGILLVVTEKGKILSCSFCNKPLSFIVNIIRSIPF 68

Query: 431 NVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +    ++     ++   +  N  +  L I  +  Y    +       P    E A S  
Sbjct: 69  IILMVAIIPITRMIAGTSIGTNAAIIPLTI-ASIPYTARLIETSVREIPVGLIEAAKSMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC 514
            +  +  + +I+P   P  +       
Sbjct: 128 ASPLQIIKKVIIPEALPSMIENITVVI 154


>gi|262203785|ref|YP_003274993.1| phosphate ABC transporter inner membrane protein [Gordonia
           bronchialis DSM 43247]
 gi|262087132|gb|ACY23100.1| phosphate ABC transporter, inner membrane subunit PstA [Gordonia
           bronchialis DSM 43247]
          Length = 317

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 73/196 (37%), Gaps = 2/196 (1%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
                  R +    F +    L   +I ++ +GI     P             +++    
Sbjct: 28  RFSDVAVRGLAVAAFVIALVPLFWLVITLVQNGIGPILDPDWWGSPEIKGGAFNAIVGTL 87

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            +T L  + ++ + ++        +     LG     ++DI+  +P +    F    +  
Sbjct: 88  IQTALAAVISIPLGIMVAIYLVEYSTGRSWLGRATTFMVDILSGVPSIVAALFVYAVWRT 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                  G  +A   A+    V  +  +  + L  +P+DL E S +  +  W+    + +
Sbjct: 148 TLGLPRSGFVVA--IALVLLMVPLVVRATEEMLKIVPQDLREASYALGIPKWKTIARVVL 205

Query: 186 PFSMPGLVWNMMMSMS 201
           P ++ G++  +M++++
Sbjct: 206 PTALSGIITGVMLAIA 221



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 85/270 (31%), Gaps = 26/270 (9%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-------FTYQDVLY 378
             P  F  +   +R S +           +A+   +  +  +V +         +     
Sbjct: 15  KRPSGFQPIAGRRRFSDVAVRGLAVAAFVIALVPLFWLVITLVQNGIGPILDPDWWGSPE 74

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           +       +   ++   +A++I IP+GI +          R  +         +L+  P+
Sbjct: 75  IKGGAFNAIVGTLIQTALAAVISIPLGIMVAIYLVEYSTGRSWLGRATTFMVDILSGVPS 134

Query: 431 N--VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
                F   V   +         +++ ++      ++          P D +E + +  I
Sbjct: 135 IVAALFVYAVWRTTLGLPRSGFVVAIALVLLMVPLVVRATEEMLKIVPQDLREASYALGI 194

Query: 489 TGWRWWRYIILPGIFPYYVTGAITA----CGGAWNASIV---SEVASWGHIHLRTTGLGA 541
             W+    ++LP      +TG + A     G +    I+   +   +W         L  
Sbjct: 195 PKWKTIARVVLPTALSGIITGVMLAIARVMGESAPVLILVGSTRAMNWNPFEGNQQSLPL 254

Query: 542 YIAESTEKG--SFPEVVLGVLIMCCFVLAL 569
            + +    G  +F +V    L +   V  +
Sbjct: 255 MMVQQYNNGPSAFDKVWGAALTLVILVALV 284


>gi|295691210|ref|YP_003594903.1| phosphate ABC transporter inner membrane subunit PstA [Caulobacter
           segnis ATCC 21756]
 gi|295433113|gb|ADG12285.1| phosphate ABC transporter, inner membrane subunit PstA [Caulobacter
           segnis ATCC 21756]
          Length = 431

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 23/202 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
            +++II ++I +PVG+               +  I+     LAA P+ V+      L ++
Sbjct: 217 AMMLIITALIAVPVGVMAAVYLEEFAPKNRWTDVIEVNINNLAAVPSIVYGLLGLALFIN 276

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            ++    +P +   +L +      ++    +   A P   +E A     +  +   + +L
Sbjct: 277 WLNVPRSSPLVGGLVLALM-ALPTVIIATRSALKAVPPSIREAALGVGASKTQTVFHHVL 335

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GL-GA--------YIA-ESTE 548
           P   P  +TGAI +   A   +    +            G  GA        +I   ++E
Sbjct: 336 PLAMPGVMTGAILSLAHALGETAPLLMIGMVSFVPGVPEGFTGAATVLPVQVFIWENASE 395

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           +         ++++  F++ +N
Sbjct: 396 RAFHERTAAAIIVLLVFMIIMN 417



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 26/202 (12%)

Query: 75  AMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            ++I+ L       +AA        K+R    V+   ++ + ++P + +    +  F+N 
Sbjct: 219 MLIITALIAVPVGVMAAVYLEEFAPKNRW-TDVIEVNINNLAAVPSIVYGLLGLALFINW 277

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                  + L     +    +  +  +   +L  +P  + E +     S  Q  ++  +P
Sbjct: 278 L-NVPRSSPLVGGLVLALMALPTVIIATRSALKAVPPSIREAALGVGASKTQTVFHHVLP 336

Query: 187 FSMPGLVWNMMMSMSGGW-------------FFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            +MPG++   ++S++                F     E      TV+P+     +I    
Sbjct: 337 LAMPGVMTGAILSLAHALGETAPLLMIGMVSFVPGVPEGFTGAATVLPVQ---VFIWENA 393

Query: 234 KEQDLLAILYAMLTMLGVIFLY 255
            E+       A + +L V  + 
Sbjct: 394 SERAFHERTAAAIIVLLVFMII 415


>gi|88854339|ref|ZP_01129006.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [marine actinobacterium PHSC20C1]
 gi|88816147|gb|EAR26002.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [marine actinobacterium PHSC20C1]
          Length = 282

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 5/214 (2%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R+ G          +    +  +  +        V GV   +       +     +  
Sbjct: 18  ARRSKGWSPRTESTLRIVAPISFGLIVLGIWQLLVTVGGVDDYLLPSPTSIVAELVEF-- 75

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              V+    +T    ++ +++ S+I I                 P    LA  P     P
Sbjct: 76  WPSVVSATALTGTNSLLGLLVGSLIGILFAAISARWRIADQMSAPIVAALAVIPIVALAP 135

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +     S +  +       +    +   I  N + G        +++  ++     +  +
Sbjct: 136 V---LNSMFGADSQFGRQAIAAIASFVPIFINTLRGFRQTKPVHRDLMKAYAANSGQMLK 192

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            + LP   P+ +TG   A   A  +++V+E    
Sbjct: 193 SLTLPTARPFILTGIRIASSLAVISALVAEYFGG 226



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 13/242 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RI   I   L  + +  ++  +  G+ +  +P     +  +     S+    + T    L
Sbjct: 33  RIVAPISFGLIVLGIWQLLVTVG-GVDDYLLPSPTSIVAELVEFWPSVVSATALTGTNSL 91

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
             +++  L   ++A ++A+ R    +  PI+  +  IPI+         F          
Sbjct: 92  LGLLVGSLIGILFAAISARWRIADQMSAPIVAALAVIPIVALAPVLNSMFGADSQFGRQA 151

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A F         +  +  +          ++ +++  +  Q    L +P + P ++
Sbjct: 152 IAAIASFV-------PIFINTLRGFRQTKPVHRDLMKAYAANSGQMLKSLTLPTARPFIL 204

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + ++ S      + +E         P  G+GS IA +            +   + +  
Sbjct: 205 TGIRIASSLAVISALVAEYFGG-----PRGGLGSLIATSAASSAYSRAWAYVGASIALGL 259

Query: 254 LY 255
           L+
Sbjct: 260 LF 261


>gi|257865777|ref|ZP_05645430.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872112|ref|ZP_05651765.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875405|ref|ZP_05655058.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
 gi|257799711|gb|EEV28763.1| phosphate ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806276|gb|EEV35098.1| phosphate ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809571|gb|EEV38391.1| phosphate ABC transporter [Enterococcus casseliflavus EC20]
          Length = 294

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 84/220 (38%), Gaps = 9/220 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYA 65
              S +I   +   +A V+V+ + ++LL+ +       +            +   +    
Sbjct: 3   AKRSDKIATGVLYAVAGVIVLILASLLLYILVRGIPHINWEFLTSSSKAYQEGGGIGIQL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +   +L  M+IS   +          AK   L  ++   ++I+ S+P +    F  + 
Sbjct: 63  FNSLYLLLVTMIISFPISLGAGIYLSEYAKKNWLTDIIRTSIEILSSLPSVVVGLFGFLV 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +         A     F   +  +T ++ +SL  I     E   S  LS W+    
Sbjct: 123 FVIQFGYGFSIISGALALTFFNLPL--LTRNVEESLQAIHYTQREAGLSLGLSRWETVTR 180

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + VP + PG++  +++S SG  F   A+ +   G +   L
Sbjct: 181 IIVPEATPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 18/200 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------------YQDVLYVIWLGC 384
           +R   +     + V   + + +A   +  +V                 YQ+   +     
Sbjct: 4   KRSDKIATGVLYAVAGVIVLILASLLLYILVRGIPHINWEFLTSSSKAYQEGGGIGIQLF 63

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVS 439
            +++ ++V +II+  I +  GI++        ++  I+   ++L++ P+ V   F  +V 
Sbjct: 64  NSLYLLLVTMIISFPISLGAGIYLSEYAKKNWLTDIIRTSIEILSSLPSVVVGLFGFLVF 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            + + +    +  +L + F     +  NV     A     +E   S  ++ W     II+
Sbjct: 124 VIQFGYGFSIISGALALTFFNLPLLTRNVEESLQAIHYTQREAGLSLGLSRWETVTRIIV 183

Query: 500 PGIFPYYVTGAITACGGAWN 519
           P   P  +TG I + G  + 
Sbjct: 184 PEATPGILTGVILSSGRIFG 203


>gi|312141958|ref|YP_004009294.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311891297|emb|CBH50618.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 318

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 4/193 (2%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKV 131
           +    + LL     +   A+    G  +V  + +  S+ P +  +T     F +      
Sbjct: 119 VVTTAVGLLLGVFASYALARIEFRGKYIVTGIILGASMFPTVALMTPLFQLFGDFG---W 175

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           IG   A I    +  +    +++   L ++P +LEE +R    S +Q F  + +P + P 
Sbjct: 176 IGQYQALIIPNISFVLPLTIYTLTSFLSDLPWELEEAARIDGASRFQAFRLVILPLAAPA 235

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L    +++    W   + + ++    T      I  +      EQ   AI+ A   +   
Sbjct: 236 LFTTAILAFIATWNEFMLASLLSTEKTEPVTVAIARFAGANSWEQPYAAIMAAGTIVTIP 295

Query: 252 IFLYDQLLFRPMI 264
           + +   L  R ++
Sbjct: 296 LVIMVLLFQRRIV 308



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 6/222 (2%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS- 416
              + ++       +       +     ++   VV   +  ++ +     +         
Sbjct: 86  WPTYVTLDNFRAALSTDKGNDFLGAIVNSLVIGVVTTAVGLLLGVFASYALARIEFRGKY 145

Query: 417 KIQPFAQLLAAFPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            +       + FP      PL      +  +     L +  I       ++ + +  S  
Sbjct: 146 IVTGIILGASMFPTVALMTPLFQLFGDFGWIGQYQALIIPNISFVLPLTIYTLTSFLSDL 205

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P + +E A     + ++ +R +ILP   P   T AI A    WN  +++ + S       
Sbjct: 206 PWELEEAARIDGASRFQAFRLVILPLAAPALFTTAILAFIATWNEFMLASLLSTEKTEPV 265

Query: 536 TTGLGAYI-AESTEKGSFPEVVLGVLI---MCCFVLALNRFL 573
           T  +  +  A S E+     +  G ++   +   VL   R +
Sbjct: 266 TVAIARFAGANSWEQPYAAIMAAGTIVTIPLVIMVLLFQRRI 307


>gi|319762200|ref|YP_004126137.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
 gi|317116761|gb|ADU99249.1| binding-protein-dependent transport systems inner membrane
           component [Alicycliphilus denitrificans BC]
          Length = 576

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 69/523 (13%), Positives = 152/523 (29%), Gaps = 67/523 (12%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFM-- 124
           +    L++   + +     A L  +    G +L+  L ++  I P         + F   
Sbjct: 78  SLWVALASTFFASVIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVALQLIFGRS 137

Query: 125 ----------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                       +   V+   +   F         +  ++  ++ NI   +EE + +   
Sbjct: 138 GSVNLLLDDWLGFTVPVMDGLVGVTFVESIHYFPFILLNLVAAMRNIDGAMEESALNLGA 197

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G + F  +  P +MPG +    +     +  +    ++ V + + P     +Y+ +   
Sbjct: 198 QGLRLFRRVIFPLAMPGYLAGAALVFVKVFDDLGTPLVMGVSNMLAPQ----AYLRITSV 253

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
             D        + M+G   L   L  R M               Y          +K   
Sbjct: 254 GVDDPLGYVISVIMIGFSILALWLAARVM-----------KGRDYATLQKGGNALQKRRL 302

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
            R+    ++ +   +   V      + ++ F    +F  L     + +   +F       
Sbjct: 303 GRWESLLAYGWILLVLAVVLAPHAGILLMSFAKVWSFSVLPDAYTLEHYATVF------- 355

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH- 413
                                      +   T+   ++   +  +I   +   I      
Sbjct: 356 ----------------------SDAGGMIGNTLLYCLLAAGLDVVIGTAIAYLILRTRLP 393

Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN------LWLSLLMIFGT--QWYIL 465
               +   A    A P  V     +       L  +       W+ +++ +      Y L
Sbjct: 394 ARQWLDWLASAALAIPGLVLAIGYLRLFKGVQLPGSDRLVVQTWVLIMLAYAVRRLPYAL 453

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            + +A         +E A S   +     R +++P +    + G +T+   A    + + 
Sbjct: 454 RSCMAALQQVHVSLEEAAQSLGASRLSTMRRVMVPLMAGGILAGFVTSFITA-AVELSAT 512

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           +            LG Y+   +  G  P   LGVL +    L 
Sbjct: 513 LVLVSTESQAPMSLGIYLYMQSIAGRGPGAALGVLAVAVVGLG 555



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 10/243 (4%)

Query: 20  FDLLAFVLVI----GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
           + LL   +V+    GI+ +    +   +V  D   +                T L  L A
Sbjct: 313 WILLVLAVVLAPHAGILLMSFAKVWSFSVLPDAYTLEHYATVFSDAGGMIGNTLLYCLLA 372

Query: 76  MVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNL-YPGKVIG 133
             + ++     A L  ++R      L  +     +IP L      +  F  +  PG    
Sbjct: 373 AGLDVVIGTAIAYLILRTRLPARQWLDWLASAALAIPGLVLAIGYLRLFKGVQLPGSDRL 432

Query: 134 AELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                +  +    V  + +++     +L  +   LEE ++S   S       + VP    
Sbjct: 433 VVQTWVLIMLAYAVRRLPYALRSCMAALQQVHVSLEEAAQSLGASRLSTMRRVMVPLMAG 492

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G++   + S       + A+ ++V  ++  P+  +G Y+ +             +L +  
Sbjct: 493 GILAGFVTSFITAAVELSATLVLVSTESQAPMS-LGIYLYMQSIAGRGPGAALGVLAVAV 551

Query: 251 VIF 253
           V  
Sbjct: 552 VGL 554



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 24/213 (11%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLG 383
                          +++ L + +      + +G + + +        T           
Sbjct: 10  ARARSPRTLASPGPLIAFGLILAFLLCFLVLPVGTVIYTAFVTETGAPTLGHFGNFFGQL 69

Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
                   +++  +     AS+I +P+           + +     +L          + 
Sbjct: 70  VFRESFFNSLWVALASTFFASVIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVA 129

Query: 438 VSCVSYYHLNPNLWL-----------------SLLMIFGTQWYILFNVIAGASAFPNDFK 480
           +  +     + NL L                 + +       +IL N++A         +
Sbjct: 130 LQLIFGRSGSVNLLLDDWLGFTVPVMDGLVGVTFVESIHYFPFILLNLVAAMRNIDGAME 189

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           E A +    G R +R +I P   P Y+ GA   
Sbjct: 190 ESALNLGAQGLRLFRRVIFPLAMPGYLAGAALV 222


>gi|291527579|emb|CBK93165.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Eubacterium rectale M104/1]
          Length = 300

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 87/234 (37%), Gaps = 32/234 (13%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------QYASRTTLRM 72
           IF + A V +  +++I ++   +       V ++ +       P             L  
Sbjct: 14  IFTVCAVVAIFAVLSITIYMFLKGAPAFFKVGVLNLLFGTKWAPTAADPSYGILYIILTS 73

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +    +S+L     A L A       +++L  ++ P ++++ +IP + +    ++    +
Sbjct: 74  IIGTAVSILIGVPIALLTAVFLTEVSNKKLSAIVQPAVELLAAIPSVIYGLLGLMILNPV 133

Query: 127 Y-----------------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                              G  + A +  +  +    V NM+ S   S+  +P+ +   S
Sbjct: 134 LYKLEKHIFANSATHQFTGGSNLFAAIIVLAIMILPTVINMSVS---SIQAVPQQMRAAS 190

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            +   +  Q  + + VP +  G++  +++ +       +A  M+  G    PLP
Sbjct: 191 LALGATKIQTIFKVTVPAAKSGIMTGIVLGIGRALGEAMAINMVAGGTVSFPLP 244



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 75/219 (34%), Gaps = 24/219 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I  +  + G         +  +             +     +   ++   ++ +I +
Sbjct: 26  VLSITIYMFLKGAPAFFKVGVLNLLFGTKWAPTAADPSYGILYIILTSIIGTAVSILIGV 85

Query: 403 PVGIWIG------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-------------- 442
           P+ +             +S+ +QP  +LLAA P+ ++  L +  ++              
Sbjct: 86  PIALLTAVFLTEVSNKKLSAIVQPAVELLAAIPSVIYGLLGLMILNPVLYKLEKHIFANS 145

Query: 443 ---YYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +    NL+ +++++       + N+ ++   A P   +  + +   T  +    + 
Sbjct: 146 ATHQFTGGSNLFAAIIVLAIMILPTVINMSVSSIQAVPQQMRAASLALGATKIQTIFKVT 205

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +P      +TG +   G A   ++   + + G +     
Sbjct: 206 VPAAKSGIMTGIVLGIGRALGEAMAINMVAGGTVSFPLP 244


>gi|146329206|ref|YP_001210066.1| ABC-type phosphate-dependent transport system family protein
           [Dichelobacter nodosus VCS1703A]
 gi|146232676|gb|ABQ13654.1| ABC-type phosphate-dependent transport system family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 438

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 8/136 (5%)

Query: 75  AMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++++L  +F  A LAA          R    L   ++ + ++P + F    +  F+N +
Sbjct: 226 TLLVTLALSFPIAVLAAIYLEEFAPKNRFTDFLEANINNLAAVPSIIFGLLGLAVFINFF 285

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G      L     +    +  +  S   +L  +P  +   +     S  Q  ++  +P 
Sbjct: 286 -GLPRSTPLVGGLVLTLMTLPTIIISSRAALKAVPPSIRAAALGLGASKMQVTFHHVLPL 344

Query: 188 SMPGLVWNMMMSMSGG 203
           +MPG++   ++ M+  
Sbjct: 345 AMPGMLTGTIIGMAQA 360



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 6/175 (3%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISS 416
           +  +  +            V      + + ++V + ++  I +   I++     +   + 
Sbjct: 197 SLNTTIFTHTDSRSPQDAGVRGAIIGSAYTLLVTLALSFPIAVLAAIYLEEFAPKNRFTD 256

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGAS 473
            ++     LAA P+ +F  L ++    +   P    L   L++   T   I+ +  A   
Sbjct: 257 FLEANINNLAAVPSIIFGLLGLAVFINFFGLPRSTPLVGGLVLTLMTLPTIIISSRAALK 316

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           A P   +  A     +  +   + +LP   P  +TG I     A   +    +  
Sbjct: 317 AVPPSIRAAALGLGASKMQVTFHHVLPLAMPGMLTGTIIGMAQALGETAPLLMIG 371


>gi|57235019|ref|YP_180889.1| phosphate ABC transporter, permease protein [Dehalococcoides
           ethenogenes 195]
 gi|57225467|gb|AAW40524.1| phosphate ABC transporter, permease protein [Dehalococcoides
           ethenogenes 195]
          Length = 286

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 9/210 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76
           L++ ++++ I   ++ G        +  D +       T D + +      + L  L +M
Sbjct: 20  LVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYDEYGILSMIVGSLLVTLGSM 79

Query: 77  VISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF--LTFTVVYFMNLYPGKVI 132
           VI++      A L A+   +R+  +L P ++++  IP + +  +   V+       G   
Sbjct: 80  VIAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAIRNLGGTG 139

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LAA+  +    +  +      SL  +PR   + S +   S WQ  W++ +P +  G+
Sbjct: 140 YSVLAAVLVLSIMVLPTIISISEDSLRAVPRTYRDGSLALGASQWQTIWHMLLPAARSGV 199

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             ++++ M       +A  M++    +IP 
Sbjct: 200 GASIVLGMGRAIGETMAMIMVIGNAVIIPT 229



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 76/208 (36%), Gaps = 16/208 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +L I  F +  G+ +  A     ++    ++     Y I    +    V +    + +I 
Sbjct: 26  LLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYDEYGILSMIVGSLLVTLG---SMVIA 82

Query: 402 IPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-----YYHLNPNL 450
           +P+GI             + + ++P  +LL   P+ V+  + +  +            ++
Sbjct: 83  VPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAIRNLGGTGYSV 142

Query: 451 WLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             ++L++       + ++      A P  +++ + +   + W+   +++LP         
Sbjct: 143 LAAVLVLSIMVLPTIISISEDSLRAVPRTYRDGSLALGASQWQTIWHMLLPAARSGVGAS 202

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTT 537
            +   G A   ++   +     + + T+
Sbjct: 203 IVLGMGRAIGETMAMIMVIGNAVIIPTS 230


>gi|315640575|ref|ZP_07895681.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483603|gb|EFU74093.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 295

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 6/161 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++  M+IS   +          AK   L  V+   ++I+ S+P +    F  +
Sbjct: 62  LFNSFYLLIVTMIISFPISLGAGIYLSEYAKQNWLTDVIRTSIEILSSLPSVVVGLFGFL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +         A     F   +  +T ++ +SL  IP    E   +  LS W+   
Sbjct: 122 VFVLQFQYGFSIISGALALTFFNLPL--LTRNVEESLRAIPATQREAGLALGLSRWETVL 179

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            + VP + PG++  +++S SG  F   A+ +   G +   L
Sbjct: 180 RVIVPEATPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFP 429
           YQ    +      + + ++V +II+  I +  GI++        ++  I+   ++L++ P
Sbjct: 52  YQVGGGIGIQLFNSFYLLIVTMIISFPISLGAGIYLSEYAKQNWLTDVIRTSIEILSSLP 111

Query: 430 ANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           + V   F  +V  + + +    +  +L + F     +  NV     A P   +E   +  
Sbjct: 112 SVVVGLFGFLVFVLQFQYGFSIISGALALTFFNLPLLTRNVEESLRAIPATQREAGLALG 171

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           ++ W     +I+P   P  +TG I + G  + 
Sbjct: 172 LSRWETVLRVIVPEATPGILTGVILSSGRIFG 203


>gi|258624243|ref|ZP_05719192.1| phosphate ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258583394|gb|EEW08194.1| phosphate ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 306

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+    +   +  I L    LP  A      
Sbjct: 28  KERIFHGLFLTSAVIGIVSLAIIAYFIVRESVPAFEEAGLSGIVLGQDWLPP-ALYGVAT 86

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S    ++       L A        +R+  V+ P ++++  IP + +    L 
Sbjct: 87  MIVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLV 146

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 147 IIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSI 206

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 207 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    ++    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|218295457|ref|ZP_03496270.1| binding-protein-dependent transport systems inner membrane
           component [Thermus aquaticus Y51MC23]
 gi|218244089|gb|EED10615.1| binding-protein-dependent transport systems inner membrane
           component [Thermus aquaticus Y51MC23]
          Length = 249

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              ++  ++P   LL A P  +  PL V  +     +      +L+       I F V  
Sbjct: 79  SSLVADLLEPVMLLLNAIPRVILAPLFVIWLGIGLASKVALSLVLVAV----LIFFAVYG 134

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E   +         R + LP +  + ++    A G A+  ++V E  +  
Sbjct: 135 GVRNVDPRLVERVRTLGGGSLWLLREVYLPSLAAWVLSSLKVAVGFAFTGAVVGEFVA-- 192

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                + GLG  ++ +    +    +  + ++
Sbjct: 193 ----ASRGLGYLLSFAQSTYNAKLSLALIALI 220



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 78/220 (35%), Gaps = 15/220 (6%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G+    L        P +++  +   L       +   T    L  +   +L       L
Sbjct: 16  GLSASGLVNPLYAPPPHEVLLTLWGFLASGEAWPHLQATFSAALLGLFWGILLGGALGLL 75

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           AA S  +  +L P++ ++ +IP +      V  ++ +     +   L  +  +       
Sbjct: 76  AAFSSLVADLLEPVMLLLNAIPRVILAPLFV-IWLGIGLASKVALSLVLVAVL------- 127

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           + F++Y  + N+   L E  R+           + +P     ++ ++ +++   +   V 
Sbjct: 128 IFFAVYGGVRNVDPRLVERVRTLGGGSLWLLREVYLPSLAAWVLSSLKVAVGFAFTGAVV 187

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            E +          G+G  ++ A    +   +  A++ ++
Sbjct: 188 GEFVAAS------RGLGYLLSFAQSTYN-AKLSLALIALI 220


>gi|184199681|ref|YP_001853888.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
 gi|183579911|dbj|BAG28382.1| putative ABC transporter permease protein [Kocuria rhizophila
           DC2201]
          Length = 225

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 74/210 (35%), Gaps = 22/210 (10%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           +++     Q  T P +      I      L ++A  + L     M I+L+          
Sbjct: 1   MSLFTEAAQFLTDPANWTGATGI---PQRLLEHAGYSAL----TMAIALVIAVPLGLWVG 53

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
            + R G  +V +   ++S           +  + L+   +    +  I A+    V  + 
Sbjct: 54  HTGRGGGAVVGLAGALRS--------LPTLGLLTLFTLLMGLGLMPPILALVLLAVPPIL 105

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
              Y  +  +   L + +R+  ++  Q  + + VP ++P ++  +  +       V    
Sbjct: 106 SGTYSGIAAVSPSLVDAARAMGMTESQTLFRVEVPVALPVILGGIRNAALQVLATVTIVA 165

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            I +G       G+G Y+   +  +D   +
Sbjct: 166 YINLG-------GLGRYLIDGLAVRDYSRM 188



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + + IA +I +P+G+W+G        +   A  L + P      L    +    + P L
Sbjct: 35  ALTMAIALVIAVPLGLWVGHTGRGGGAVVGLAGALRSLPTLGLLTLFTLLMGLGLMPPIL 94

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L LL        IL    +G +A      + A +  +T  +    + +P   P  + G 
Sbjct: 95  ALVLL----AVPPILSGTYSGIAAVSPSLVDAARAMGMTESQTLFRVEVPVALPVILGGI 150

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             A         +    + G       GLG Y+ +      +  +
Sbjct: 151 RNAALQVLATVTIVAYINLG-------GLGRYLIDGLAVRDYSRM 188


>gi|169829093|ref|YP_001699251.1| ABC transporter permease [Lysinibacillus sphaericus C3-41]
 gi|168993581|gb|ACA41121.1| Probable ABC transporter permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 304

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+++    +   +A       S +   ++ PIL+++  +P + +    LTF       
Sbjct: 88  TLIAVVVAVPFGIASAIYLSEYASEKTRRIVKPILEVLAGVPTIVYGFFALTFVTPLLQE 147

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG  +   L+    +    +  +T     ++ ++P  + E + +   + ++    + +
Sbjct: 148 IVPGLKLFNALSPGIVVGIMILPMITSLSEDAMSSVPNSMREGALALGATKFEVAIKVVL 207

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++ G++ ++++++S  
Sbjct: 208 PAALSGIIASIVLAISRA 225



 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA ++ +P GI                 ++P  ++LA  P  V+         PL+  
Sbjct: 88  TLIAVVVAVPFGIASAIYLSEYASEKTRRIVKPILEVLAGVPTIVYGFFALTFVTPLLQE 147

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V    L   L   +++       I        S+ PN  +E A +   T +     ++L
Sbjct: 148 IVPGLKLFNALSPGIVVGIMILPMITSLSEDAMSSVPNSMREGALALGATKFEVAIKVVL 207

Query: 500 PGIFPYYVTGAITACGGA 517
           P      +   + A   A
Sbjct: 208 PAALSGIIASIVLAISRA 225


>gi|126652196|ref|ZP_01724375.1| hypothetical protein BB14905_22258 [Bacillus sp. B14905]
 gi|126590928|gb|EAZ85040.1| hypothetical protein BB14905_22258 [Bacillus sp. B14905]
          Length = 315

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+++    +   +A       S +    + PIL+++  +P + +    LTF       
Sbjct: 99  TLIAVVVAVPFGIASAIYLSEYASEKTRRTVKPILEVLAGVPTIVYGFFALTFVTPLLQE 158

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG  +   L+    +    +  +T     ++ ++P  + E + +   + ++    + +
Sbjct: 159 IVPGLKLFNALSPGIVVGIMILPMITSLSEDAMSSVPNSMREGALALGATKFEVAIKVVL 218

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++ G++ ++++++S  
Sbjct: 219 PAALSGIIASIVLAISRA 236



 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
             G     F+  + L+ I        +V    +IA ++ +P GI                
Sbjct: 71  LFGTKWLPFSGNEPLFGILPLIAGTLKV---TLIAVVVAVPFGIASAIYLSEYASEKTRR 127

Query: 417 KIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            ++P  ++LA  P  V+         PL+   V    L   L   +++       I    
Sbjct: 128 TVKPILEVLAGVPTIVYGFFALTFVTPLLQEIVPGLKLFNALSPGIVVGIMILPMITSLS 187

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               S+ PN  +E A +   T +     ++LP      +   + A   A
Sbjct: 188 EDAMSSVPNSMREGALALGATKFEVAIKVVLPAALSGIIASIVLAISRA 236


>gi|116248684|ref|YP_764525.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253334|emb|CAK11722.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 271

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++LL         A+ +     +  ++ I +  P L FL    + F
Sbjct: 69  YLWNSVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLF 126

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +  ++     +    V  +    ++     P +LEE +     + WQ F  +
Sbjct: 127 QWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFE---TTPMELEEAASIDGATPWQVFRLV 183

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 184 ALPIARPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 241

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      R ++ 
Sbjct: 242 AALIVTLPVLILTVFAQRQIVA 263



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 73  SVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLFQWLN 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   L   +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 131 LLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 191 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 248

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 249 PVLILTVFAQR 259


>gi|71894521|ref|YP_278629.1| spermidine/putrescine ABC transporter permease protein PotB
           [Mycoplasma synoviae 53]
          Length = 263

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 16/204 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY--- 122
            R+      A +I L    +YA   +KS+     +  +  I   I  L   T   +Y   
Sbjct: 48  LRSLKLGFIASIICLFIGIIYAYWVSKSKNKFFKIYALTLI---ISPLAIFTIARIYSIK 104

Query: 123 --FMNLYPG--KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             F+ L+ G  K + +E   +  +    +  M   +Y    ++P++  E S     S ++
Sbjct: 105 GLFLALFAGDPKSLNSEWFIVVGLVYLNLPLMIMPLYSVFKDMPKNTVEASNDLGYSNFK 164

Query: 179 KFWYLGVPFSMPGLVWNM-MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            F+ + +P++   ++  + M+ ++    FVVA +++  G        IG  I   I   +
Sbjct: 165 TFFKVIIPYATKAILSGIAMIFLASATTFVVARKLLPDGSQNQL---IGELINEKINPGN 221

Query: 238 LLAI--LYAMLTMLGVIFLYDQLL 259
              +    A++ ++  IF+   LL
Sbjct: 222 PFDLSSGSALVIVVSAIFIGTYLL 245


>gi|283853670|ref|ZP_06370902.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio sp. FW1012B]
 gi|283570941|gb|EFC18969.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio sp. FW1012B]
          Length = 297

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 20/207 (9%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--Y 122
           LS  ++S         + A       SR+   +  PI++++ ++P  ++GF    VV  +
Sbjct: 75  LSVTLVSSAIAIPLGVMTAIYLAEIASRKTRDIFKPIVELLAALPSVVIGFFGMVVVAPF 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +          A   +    V  +      ++  +PR+L+E S +   + ++    
Sbjct: 135 LQETFDLATGLNLFNASIMLAFMSVPTICSVSEDAIYAVPRELKEASLALGATHFETITK 194

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL----------PGIGSYIALA 232
           + +P S+ G+   +M+ MS      +   M+  G  +IP             I + +A A
Sbjct: 195 VVLPASLSGISTAVMLGMSRAIGETMVVLMVAGGAAIIPTSIFSAVRPMPSSIAAEMAEA 254

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
               D    L+A+  +L +  L   L+
Sbjct: 255 SFRGDHYRALFAIGIVLFLFTLVFNLV 281



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 91/270 (33%), Gaps = 25/270 (9%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
              +N   L +   +  +  I  +    G+ I      + ++  +  Y       +    
Sbjct: 10  RLIQNAFFLTALSSIVALALIMIYLFAEGLPIFKDVSVLDFLFGNLWYPTSDPPEFGIFP 69

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV------- 432
            +   + + +++S I IP+G+                  +P  +LLAA P+ V       
Sbjct: 70  LIVASLSVTLVSSAIAIPLGVMTAIYLAEIASRKTRDIFKPIVELLAALPSVVIGFFGMV 129

Query: 433 -FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P +               S+++ F +   I         A P + KE + +   T +
Sbjct: 130 VVAPFLQETFDLATGLNLFNASIMLAFMSVPTICSVSEDAIYAVPRELKEASLALGATHF 189

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT----------TGLGA 541
                ++LP       T  +     A   ++V  + + G   + T          + + A
Sbjct: 190 ETITKVVLPASLSGISTAVMLGMSRAIGETMVVLMVAGGAAIIPTSIFSAVRPMPSSIAA 249

Query: 542 YIAESTEKGSFPEVVLGV-LIMCCFVLALN 570
            +AE++ +G     +  + +++  F L  N
Sbjct: 250 EMAEASFRGDHYRALFAIGIVLFLFTLVFN 279


>gi|228941970|ref|ZP_04104513.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974901|ref|ZP_04135462.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981494|ref|ZP_04141791.1| ABC transporter permease protein [Bacillus thuringiensis Bt407]
 gi|229193071|ref|ZP_04320026.1| ABC transporter permease protein [Bacillus cereus ATCC 10876]
 gi|228590335|gb|EEK48199.1| ABC transporter permease protein [Bacillus cereus ATCC 10876]
 gi|228778173|gb|EEM26443.1| ABC transporter permease protein [Bacillus thuringiensis Bt407]
 gi|228784754|gb|EEM32772.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817639|gb|EEM63721.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 150

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P     P+++         PN+  S+ M +  +    +  + +      +++ +V  +F
Sbjct: 1   MPKVALGPIIIVIFG-----PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTF 55

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               W+ ++ ++LP  FP  ++      G +W   I  E+       +   GLG  I+  
Sbjct: 56  GANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELL------VSKQGLGYLISYG 109

Query: 547 TEKGSF 552
            +  +F
Sbjct: 110 FQVFNF 115



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 14/129 (10%)

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P +      +V F       +    + +I               Y +   +  +  +V 
Sbjct: 1   MPKVALGPIIIVIFGPNISSSIAMGVIISIIITILVI--------YSAFQEVDSNYIKVM 52

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +F  + WQ +  + +P S P ++  + +++   W  V+  E++V         G+G  I
Sbjct: 53  DTFGANKWQCYKQVVLPASFPAIISTLKVNVGLSWVGVIFGELLV------SKQGLGYLI 106

Query: 230 ALAIKEQDL 238
           +   +  + 
Sbjct: 107 SYGFQVFNF 115


>gi|225569386|ref|ZP_03778411.1| hypothetical protein CLOHYLEM_05470 [Clostridium hylemonae DSM
           15053]
 gi|225161594|gb|EEG74213.1| hypothetical protein CLOHYLEM_05470 [Clostridium hylemonae DSM
           15053]
          Length = 287

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 75/201 (37%), Gaps = 6/201 (2%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD---IVDIVPITLDVHS 60
           Y   P      +   +  +L F ++I +I  +L        P            +L    
Sbjct: 15  YRRRPGSFLVMLLVMLSAILTFTVLIFLIAYILIRGVPYITPSLFSFTYTSENASLMPA- 73

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T L +L A+   +         A +  R   ++    + +  IP + +  F +
Sbjct: 74  LINTVVMTLLSLLIAVPFGIFSAIFLVEYAGRGNRFVEMIRLTTETLSGIPSIVYGLFGM 133

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           ++F+     +   + LA  F +    +  +  +  ++L ++P    E S        +  
Sbjct: 134 LFFVT--TCEWGFSLLAGAFTLAIMILPLIMRTTEEALRSVPDSYREGSFGLGAGKLRTV 191

Query: 181 WYLGVPFSMPGLVWNMMMSMS 201
           + + +P ++PG++  +++++ 
Sbjct: 192 FRIVLPSAVPGILAGVILAVG 212



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F V+  +   I  + + YI                   +   VV+ +++ +I +
Sbjct: 30  LSAILTFTVLIFLIAYILIRGVPYITPSLFSFTYTSENASLMPALINTVVMTLLSLLIAV 89

Query: 403 PVGI--------WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453
           P GI        + G        I+   + L+  P+ V+    +           +L   
Sbjct: 90  PFGIFSAIFLVEYAGRGNRFVEMIRLTTETLSGIPSIVYGLFGMLFFVTTCEWGFSLLAG 149

Query: 454 LLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +      ++         + P+ ++E +        R    I+LP   P  + G I 
Sbjct: 150 AFTLAIMILPLIMRTTEEALRSVPDSYREGSFGLGAGKLRTVFRIVLPSAVPGILAGVIL 209

Query: 513 ACG 515
           A G
Sbjct: 210 AVG 212


>gi|304439475|ref|ZP_07399384.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304372071|gb|EFM25668.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 244

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 10/157 (6%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +  A P   F    +  VS  +LN            +   +  N++ G      ++ 
Sbjct: 94  LVMIFKAVPIVSFIVFFLFFVSSKYLN-----IFTASIVSLQIVFTNIMEGLRNIDEEYL 148

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
            +A  +    +  ++YI +  +  Y       A G A+ AS+ +EV S         GLG
Sbjct: 149 FMAKMYRAKKYLIFKYIYMDHLMTYLKAALSVAIGMAFKASVAAEVISHPE-----HGLG 203

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
             I ES       E++   +        + + +   L
Sbjct: 204 TRIYESKIYLDLNELLTFSIFTVLISYLVEKIVLRCL 240



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 103/243 (42%), Gaps = 14/243 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF  L  +L+  I+   +        P  ++  + + +           T    L  +++
Sbjct: 10  IFTGLTVILIWQILYNFVDVEIFKVSPLSVLQNIYVNVLTREFYLDIFYTLTFTLCGIIL 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            ++   +   L+ KS  +  +   ++ I +++PI+ F    +V+F+     K +    A+
Sbjct: 70  GIIIAILLTYLSYKSTFIMELSKTLVMIFKAVPIVSF----IVFFLFFVSSKYLNIFTAS 125

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I ++       +  ++ + L NI  +   +++ +R   +  F Y+ +   M  L   + +
Sbjct: 126 IVSLQI-----VFTNIMEGLRNIDEEYLFMAKMYRAKKYLIFKYIYMDHLMTYLKAALSV 180

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++   +   VA+E+I       P  G+G+ I  +    DL  +L   +  + + +L +++
Sbjct: 181 AIGMAFKASVAAEVIS-----HPEHGLGTRIYESKIYLDLNELLTFSIFTVLISYLVEKI 235

Query: 259 LFR 261
           + R
Sbjct: 236 VLR 238


>gi|206576005|ref|YP_002237454.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease protein [Klebsiella pneumoniae 342]
 gi|206565063|gb|ACI06839.1| ABC transporter, quaternary amine uptake transporter (QAT) family,
           permease protein [Klebsiella pneumoniae 342]
          Length = 245

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 18/246 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++ G+       S  +               L     + VV   + A+++ 
Sbjct: 9   WWLIALFIGLLVGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVASSLAATVVG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +  G+ +       S  +P  + +AA     P      + V  + +  L   + L+L  I
Sbjct: 69  LGAGVAV--TRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIALALYGI 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  + P+    VA    +TGW+    + LP   P  + G  T+    
Sbjct: 127 L----PVLQGTLAGLGSIPSGVSGVAEGMGMTGWQRLYKVELPLAGPVILAGIRTSVIVN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   +V G L++    + ++R     L
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRAF-ERL 234

Query: 578 YLYGTR 583
             + +R
Sbjct: 235 TRWISR 240



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD----IMQSIPILGFLTFTVVYFMN 125
             ++++ + + +         A +R  G    P+++    I Q+ P +  L   V     
Sbjct: 55  WLVVASSLAATVVG--LGAGVAVTRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLG- 111

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                     L A+ A+    +  +       L +IP  +  V+    ++GWQ+ + + +
Sbjct: 112 -------FGWLPALIALALYGILPVLQGTLAGLGSIPSGVSGVAEGMGMTGWQRLYKVEL 164

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P + P ++  +  S+         +  +           +G+ I + +   +   I+   
Sbjct: 165 PLAGPVILAGIRTSVIVNIGTATIASTVGAST-------LGTPIIIGLSGFNTAYIVQGA 217

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFR 271
           L +     + D+  F  +  W ++ R
Sbjct: 218 LLVALAAIIVDRA-FERLTRWISRHR 242


>gi|300855940|ref|YP_003780924.1| putative metal ion ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436055|gb|ADK15822.1| predicted ABC-type metal ion transport system, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 220

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 10/160 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLT 117
             T   ++   ++   F F+ A +           ++ +  +   ++ +++S P    L 
Sbjct: 19  IATLKMLVLGALLGGFFGFILAMIMYMTREDGIRPNKTVNTISNALISVIRSFP-FIILM 77

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            +++    L  G  IG + AAI  +  +    M      SL  +   L E ++SF  S  
Sbjct: 78  VSIIPLTRLIVGTSIGWQ-AAIVPLTVAATPFMARIFENSLKEVNPSLVEAAKSFGASDM 136

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           Q  + + +  ++P LV   ++S+     F   +  I  G 
Sbjct: 137 QIIFKVVIVEALPSLVSGYILSVIQVLNFTAVAGTIGAGG 176



 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 69/205 (33%), Gaps = 27/205 (13%)

Query: 368 VNHFTYQDVLYVIWLGC--ITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSK 417
           +    +++++  I L     T+  +V+  ++       + + +             +++ 
Sbjct: 1   MRDIPWEEIINRIMLPACIATLKMLVLGALLGGFFGFILAMIMYMTREDGIRPNKTVNTI 60

Query: 418 IQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY--ILFNVIAG 471
                 ++ +FP  +      PL    +    +     +  L +  T +   I  N +  
Sbjct: 61  SNALISVIRSFPFIILMVSIIPL-TRLIVGTSIGWQAAIVPLTVAATPFMARIFENSL-- 117

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
                    E A SF  +  +    +++    P  V+G I +     N + V+       
Sbjct: 118 -KEVNPSLVEAAKSFGASDMQIIFKVVIVEALPSLVSGYILSVIQVLNFTAVA------- 169

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVV 556
             +   GLGA   +   + +  +V+
Sbjct: 170 GTIGAGGLGASALQYGYQSNNDKVM 194


>gi|257795416|ref|ZP_05644395.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9781]
 gi|258421436|ref|ZP_05684363.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
 gi|257789388|gb|EEV27728.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9781]
 gi|257842860|gb|EEV67282.1| binding-protein-dependent transport system inner membrane component
           [Staphylococcus aureus A9719]
          Length = 219

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
            LD   L Q    T   +  A+ +  +       L   +R+        +  VL P+++I
Sbjct: 5   DLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSLP-FIILLIAIVPFTKLVVGTSIGTT-AAIVPLTVYVAPYIARLVENSLLEVDEGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EATKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D   ++     T++ V + + + ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNPLINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V            E  
Sbjct: 67  SLPFIILL-IAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEGIIEAT 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|152998410|ref|YP_001343245.1| phosphate ABC transporter inner membrane subunit PstA [Marinomonas
           sp. MWYL1]
 gi|150839334|gb|ABR73310.1| phosphate ABC transporter, inner membrane subunit PstA [Marinomonas
           sp. MWYL1]
          Length = 570

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +L   V+   F  V A      A    +   +   ++ +  +P + +  F + +F+
Sbjct: 325 TVMMVLLMTVLVTPFGVVAAVYLREYASQGWVTRTIRIAVNNLAGVPSIVYGVFGLGFFI 384

Query: 125 NLY---------------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                             P    G  + A   +    V  +  +  + L  IPR++ E S
Sbjct: 385 YFLGSGIDQAFFPEALPSPTFGTGGLMWASITLALLTVPVVIVATEEGLSRIPRNVREGS 444

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + ++  W + +P + P ++  ++++++  
Sbjct: 445 LALGATKFETLWRVVLPMASPAIMTGVILAVARA 478



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            FFP  +     +     +W S+ +   T   ++     G S  P + +E + +   T +
Sbjct: 394 AFFPEALPS-PTFGTGGLMWASITLALLTVPVVIVATEEGLSRIPRNVREGSLALGATKF 452

Query: 492 RWWRYIILPGIFPYYVTGAITACGGA 517
                ++LP   P  +TG I A   A
Sbjct: 453 ETLWRVVLPMASPAIMTGVILAVARA 478


>gi|83592128|ref|YP_425880.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575042|gb|ABC21593.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 225

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 60/151 (39%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQS 109
           + SL +  S T + + ++ +++ +F      L          +      V   I++  +S
Sbjct: 6   IQSLLESLSETLIMVGASSLLATVFGVPLGVLLLVTGKGQILERPLFNKVAGAIVNATRS 65

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P    L   ++    L  G  IG   A +  +  +  + +   +  SL  +   L E +
Sbjct: 66  TP-FIILMVAIIPLTRLIVGTSIGTAAATVPLVIAAVPF-VARLVEASLREVDTGLVEAA 123

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++   S  Q    + +P +MPG+   + +++
Sbjct: 124 QAMGASPGQIITKVMLPEAMPGITAGLTITV 154



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    ++A++  +P+G+         I  RP  +           + P  +    +
Sbjct: 16  TLIMVGASSLLATVFGVPLGVLLLVTGKGQILERPLFNKVAGAIVNATRSTPFIILMVAI 75

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    +        L+I     ++   V A          E A +   +  +  
Sbjct: 76  IPLTRLIVGTSIGTAAATVPLVI-AAVPFVARLVEASLREVDTGLVEAAQAMGASPGQII 134

Query: 495 RYIILPGIFPYYVTGAITAC 514
             ++LP   P    G     
Sbjct: 135 TKVMLPEAMPGITAGLTITV 154


>gi|296453295|ref|YP_003660438.1| maltose/maltodextrin ABC transporter [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296182726|gb|ADG99607.1| maltose/maltodextrin ABC superfamily ATP binding cassette
           transporter [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 308

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 17/256 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR-----------DIVDIVPITLDVHSLPQYASRTTL 70
           +LA + VI I+ ++L    +   P            D    +     + + P+    T +
Sbjct: 45  VLAVIWVIPIVWVVLESFNKNPGPYNETFFPTEYTLDNYTKLFTDTHILNFPRMFMHTLV 104

Query: 71  RMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
             +   +IS+ F    A   ++ R R     + I+ ++   P  G ++  V+YF+    G
Sbjct: 105 ISIVVCLISVFFVLCVAFCMSRMRFRFRKSFMNIVLVLGMFP--GIMSVVVIYFILKSLG 162

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              G  +     +  S      F + +  +  IP  L+E +     + WQ F  + +P  
Sbjct: 163 LTQGVGVTVALILVYSAGAGAGFYVMKGYMDTIPMSLDEAAYLDGCTRWQVFIKIIIPVC 222

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE-QDLLAILYAMLT 247
            P LV+  + S  G W   V ++ I        +  +G Y  L+ +   D  A   A   
Sbjct: 223 KPMLVYQALTSFLGPWLDFVMAKAIARTQDNYTVA-LGLYQMLSREYLNDWFARFAAAAV 281

Query: 248 MLGVIFLYDQLLFRPM 263
           ++ V      ++ +  
Sbjct: 282 IISVPIAILFIVMQRF 297



 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 11/213 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFP 429
           FT   +L    +   T+   +V+ +I+    + V   +                +L  FP
Sbjct: 87  FTDTHILNFPRMFMHTLVISIVVCLISVFFVLCVAFCMSRMRFRFRKSFMNIVLVLGMFP 146

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIF------GTQWYILFNVIAGASAFPNDFKEVA 483
             +   ++   +    L   + +++ +I       G  +Y++   +      P    E A
Sbjct: 147 GIMSVVVIYFILKSLGLTQGVGVTVALILVYSAGAGAGFYVMKGYMD---TIPMSLDEAA 203

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS-WGHIHLRTTGLGAY 542
                T W+ +  II+P   P  V  A+T+  G W   ++++  +     +    GL   
Sbjct: 204 YLDGCTRWQVFIKIIIPVCKPMLVYQALTSFLGPWLDFVMAKAIARTQDNYTVALGLYQM 263

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           ++       F       +I+   +  L   +  
Sbjct: 264 LSREYLNDWFARFAAAAVIISVPIAILFIVMQR 296


>gi|62289207|ref|YP_221000.1| sugar ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|82699144|ref|YP_413718.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|189023478|ref|YP_001934246.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225851764|ref|YP_002731997.1| binding-protein-dependent transport systems inner membrane protein
           [Brucella melitensis ATCC 23457]
 gi|254690530|ref|ZP_05153784.1| maltose transport system permease protein MALG [Brucella abortus
           bv. 6 str. 870]
 gi|254696655|ref|ZP_05158483.1| maltose transport system permease protein MALG [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254731563|ref|ZP_05190141.1| maltose transport system permease protein MALG [Brucella abortus
           bv. 4 str. 292]
 gi|256046023|ref|ZP_05448895.1| maltose transport system permease protein MALG [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112735|ref|ZP_05453656.1| maltose transport system permease protein MALG [Brucella melitensis
           bv. 3 str. Ether]
 gi|256264723|ref|ZP_05467255.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260546503|ref|ZP_05822243.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260563303|ref|ZP_05833789.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260756091|ref|ZP_05868439.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|260759316|ref|ZP_05871664.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260761037|ref|ZP_05873380.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|265992435|ref|ZP_06104992.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994179|ref|ZP_06106736.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|297247621|ref|ZP_06931339.1| multiple sugar transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|62195339|gb|AAX73639.1| sugar ABC transporter, permease protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82615245|emb|CAJ10196.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|189019050|gb|ACD71772.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225640129|gb|ACO00043.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis ATCC 23457]
 gi|260096610|gb|EEW80486.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260153319|gb|EEW88411.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260669634|gb|EEX56574.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 4 str. 292]
 gi|260671469|gb|EEX58290.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676199|gb|EEX63020.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 6 str. 870]
 gi|262765160|gb|EEZ11081.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 3 str. Ether]
 gi|263003501|gb|EEZ15794.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263095132|gb|EEZ18801.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|297174790|gb|EFH34137.1| multiple sugar transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326408258|gb|ADZ65323.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326537973|gb|ADZ86188.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M5-90]
          Length = 291

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +        W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTTWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALALTFVIQKHLV 281



 Score = 38.0 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSL----LMIFGTQWYI--LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L L    L I  T W I   F         P D  E A     T W+ +  +  P  
Sbjct: 153 HFGLILTYVALNIPFTTWLIDGFF------RQVPKDLAEAAQIDGCTRWQAFWQVEFPLA 206

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
            P   +  I A    WN  ++ S++    +      GL  Y AE T    +  +    ++
Sbjct: 207 GPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVV 264

Query: 562 MCCFVLAL 569
           M    LAL
Sbjct: 265 MIVPALAL 272


>gi|303325963|ref|ZP_07356406.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863879|gb|EFL86810.1| quaternary amine uptake ABC transporter (QAT) family, permease
           protein [Desulfovibrio sp. 3_1_syn3]
          Length = 213

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 15/202 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +L +        +   + +SL    V    A  S+     LV +  ++ +IP L     
Sbjct: 10  ATLGRAFLEHLWMVAVVLGLSLAAAAVLTVTAMYSKVWSAFLVNLFSVIYAIPSLAL--- 66

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
               F  L P   +G   A I  I  +Q   +  +    L  +   + E +    +S  Q
Sbjct: 67  ----FAILIPATGLGTTTAIIVLILYNQYV-LLRNFLAGLRGVDPAVLEAAAGMGMSTLQ 121

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P S+  L   + ++        V++  I      I   G+GS +   ++  ++
Sbjct: 122 VLYKIRLPLSLTPLFAGLRLA-------AVSTIGIATIAATINAGGLGSILFDGLRSMNM 174

Query: 239 LAILYAMLTMLGVIFLYDQLLF 260
             I++  L    +    + LL 
Sbjct: 175 YKIMWGALLSACLAIGANHLLL 196



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 11/163 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
               S+ +     ++ A P+   F +++               +++I   Q+ +L N +A
Sbjct: 44  SKVWSAFLVNLFSVIYAIPSLALFAILIPATGLGTTT----AIIVLILYNQYVLLRNFLA 99

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           G         E A+   ++  +    I LP        G   A       + ++   + G
Sbjct: 100 GLRGVDPAVLEAAAGMGMSTLQVLYKIRLPLSLTPLFAGLRLAAVSTIGIATIAATINAG 159

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                  GLG+ + +     +  +++ G L+  C  +  N  L
Sbjct: 160 -------GLGSILFDGLRSMNMYKIMWGALLSACLAIGANHLL 195


>gi|260555291|ref|ZP_05827512.1| D-methionine transport system permease metI [Acinetobacter
           baumannii ATCC 19606]
 gi|260411833|gb|EEX05130.1| D-methionine transport system permease metI [Acinetobacter
           baumannii ATCC 19606]
          Length = 219

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +SIP 
Sbjct: 9   LITGTVDTLLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSIPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSIPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|84394455|ref|ZP_00993170.1| ABC transporter, permease protein [Vibrio splendidus 12B01]
 gi|84374925|gb|EAP91857.1| ABC transporter, permease protein [Vibrio splendidus 12B01]
          Length = 227

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           I+L+ + L      T   +  A ++          +   +++        L  +L  +++
Sbjct: 12  ISLNGNLLLGATGETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAVVN 71

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 72  VGRSVPFLVLM-VAIIPLTKMLIGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 129

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 130 VEAAQSMGATPTQIINKVLLPEALPTIINSVTITL 164



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 69/218 (31%), Gaps = 21/218 (9%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPA 430
           ++     T++ V V  I+   + IP+G+ +      G      ++  +     +  + P 
Sbjct: 19  LLGATGETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNKILGAVVNVGRSVPF 78

Query: 431 NVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            V      PL    +  +       + L +  G   ++   + +     P    E A S 
Sbjct: 79  LVLMVAIIPLTKMLIGTFIGTTAAIVPLTI--GAIPFVARLIESALLEVPTGLVEAAQSM 136

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +    ++LP   P  +           + S ++     G +       G +  + 
Sbjct: 137 GATPTQIINKVLLPEALPTIINSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDV 196

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           T       ++   ++M   ++ + + +   L       
Sbjct: 197 T-------IMAVTVVMLIVLVQIIQSIGDSLVRRVDHR 227


>gi|255018548|ref|ZP_05290674.1| hypothetical protein LmonF_14066 [Listeria monocytogenes FSL
           F2-515]
          Length = 130

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +I A+II IP+G++I  +  ++  +   A ++   PA     +++  +         
Sbjct: 30  AYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNT--- 86

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            + L +   +   IL N   G         E   +  +T W+  R
Sbjct: 87  -VVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLR 130



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           R  L     ++ + +         A+ +RL   ++ I +I+Q+IP L  L   ++     
Sbjct: 24  RHFLMSAYGVIFAAIIAIPLGVYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLG 83

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                       + ++F   +  +  + Y  + N+   L E  ++  ++ WQ   
Sbjct: 84  --------TNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVLR 130


>gi|228476053|ref|ZP_04060761.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           hominis SK119]
 gi|314936466|ref|ZP_07843813.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           hominis subsp. hominis C80]
 gi|228269876|gb|EEK11356.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           hominis SK119]
 gi|313655085|gb|EFS18830.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           hominis subsp. hominis C80]
          Length = 308

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 103/294 (35%), Gaps = 24/294 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV---------PIT 55
           N      S +I P I  ++A + ++  I IL   I ET      V I          P +
Sbjct: 15  NAKKGGFSDKIVPIILGIIAAISILTTIGILFTLITETITFFTRVSITEFLFTKDWSPTS 74

Query: 56  LDVH-SLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPI 112
            D    +      T        ++++      A   ++  S +   ++ PIL+I+  IP 
Sbjct: 75  SDPKYGIWALILGTLKITFIGTLVAVPIGLGAAIYLSEYASDKARRIIKPILEILAGIPT 134

Query: 113 LGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + F    LTF         P       ++    +    V  +T     ++ ++P  + E 
Sbjct: 135 IVFGFFALTFVTPLLRTFIPQLDSFNSISPGIVVGIMIVPIITSMSEDAMASVPNKMREG 194

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL------ 222
           +     + ++    + +P +  G++ ++++ +S      +   +         L      
Sbjct: 195 AFGLGSTKFEVATKVVLPAAASGVIASIVLGISRAIGETMIVSLAAGSSPTSSLTLTSSI 254

Query: 223 -PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
               G  + +A  +    + +Y  +  +G       L+   +  W S ++R E 
Sbjct: 255 QTMTGYIVEIATGDATFGSDIYYSIYAVGFTLFIFTLIMNLISYWISKRYREEY 308



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 17/182 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
             T  D  Y IW   +   ++     I +++ +P+G+                 I+P  +
Sbjct: 71  SPTSSDPKYGIWALILGTLKITF---IGTLVAVPIGLGAAIYLSEYASDKARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         PL+ + +       ++   +++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPLLRTFIPQLDSFNSISPGIVVGIMIVPIITSMSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T +     ++LP      +   +     A   +++  +A+       
Sbjct: 188 PNKMREGAFGLGSTKFEVATKVVLPAAASGVIASIVLGISRAIGETMIVSLAAGSSPTSS 247

Query: 536 TT 537
            T
Sbjct: 248 LT 249


>gi|261369018|ref|ZP_05981901.1| phosphate ABC transporter, permease protein PstA [Subdoligranulum
           variabile DSM 15176]
 gi|282568894|gb|EFB74429.1| phosphate ABC transporter, permease protein PstA [Subdoligranulum
           variabile DSM 15176]
          Length = 304

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 57/142 (40%), Gaps = 2/142 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L      T   ++ A  + +         A +  +L  V+    + +Q IP + +  F 
Sbjct: 90  ALINTVLMTAFSLVIATPLGIFAAIWLVEYAKRGNKLVRVVRVTTETLQGIPSIVYGLFG 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F+         + +A  F +    +  +  +  ++L  +P    E S        + 
Sbjct: 150 MLFFVTQLHWGY--SLIAGAFTLAIMVLPVIMRTTEEALIAVPDSYREGSFGLGAGKLRT 207

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
            + + +P +MPG++  ++++  
Sbjct: 208 VFTIVLPSAMPGILSGIILATG 229



 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 6/148 (4%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA----QLLAAFP 429
            D + ++     T+      ++IA+ + I   IW+       +K+        + L   P
Sbjct: 82  SDNVSLMPALINTVLMTAFSLVIATPLGIFAAIWLVEYAKRGNKLVRVVRVTTETLQGIP 141

Query: 430 ANVFFPLVVSCVSY-YHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFH 487
           + V+    +       H   +L      +      ++         A P+ ++E +    
Sbjct: 142 SIVYGLFGMLFFVTQLHWGYSLIAGAFTLAIMVLPVIMRTTEEALIAVPDSYREGSFGLG 201

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACG 515
               R    I+LP   P  ++G I A G
Sbjct: 202 AGKLRTVFTIVLPSAMPGILSGIILATG 229


>gi|163789823|ref|ZP_02184260.1| phosphate ABC transporter, permease protein [Carnobacterium sp.
           AT7]
 gi|159875045|gb|EDP69112.1| phosphate ABC transporter, permease protein [Carnobacterium sp.
           AT7]
          Length = 294

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 14/186 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F LLAF+L+ G+  I    + +      +   + I L           +   +   M+I
Sbjct: 25  LFSLLAFILIRGLPQISWEFLTQPAKSFQVGGGIGIQL---------FNSFYLLFLTMLI 75

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S       A      AK   L  ++   ++++ S+P +    F  + F+  +        
Sbjct: 76  STPLALGAAIYLSEYAKQNWLTDIIRTAIEVLSSLPSVVVGLFGFLIFVIQFDFGFSILS 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A    IF   +  +T ++  SL  IP    E   +  LS W+    + +P ++PG++  
Sbjct: 136 GALALTIFNLPL--LTRTIEDSLQAIPGVQREAGLALGLSRWETVTRIILPAAIPGILTG 193

Query: 196 MMMSMS 201
           M+++  
Sbjct: 194 MILAAG 199



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 73/187 (39%), Gaps = 8/187 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
             +++ I +  +   +  G+   S  ++        V   I +    + + + + ++I++
Sbjct: 18  SIFIVLILFSLLAFILIRGLPQISWEFLTQPAKSFQVGGGIGIQLFNSFYLLFLTMLIST 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            + +   I++        ++  I+   ++L++ P+ V   F  ++  +  +    ++   
Sbjct: 78  PLALGAAIYLSEYAKQNWLTDIIRTAIEVLSSLPSVVVGLFGFLIFVIQ-FDFGFSILSG 136

Query: 454 LLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            L +      +L   I     A P   +E   +  ++ W     IILP   P  +TG I 
Sbjct: 137 ALALTIFNLPLLTRTIEDSLQAIPGVQREAGLALGLSRWETVTRIILPAAIPGILTGMIL 196

Query: 513 ACGGAWN 519
           A G  + 
Sbjct: 197 AAGRIFG 203


>gi|119485628|ref|ZP_01619903.1| Phosphate ABC transporter, permease protein PstC [Lyngbya sp. PCC
           8106]
 gi|119456953|gb|EAW38080.1| Phosphate ABC transporter, permease protein PstC [Lyngbya sp. PCC
           8106]
          Length = 318

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 99/284 (34%), Gaps = 35/284 (12%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
           F S  I+          +++ +I + +            +  +     D  +    A   
Sbjct: 22  FDSGFIWLTRIFAWGIAVILLLIALPIAQQALPALQKFGLGFLFTSAWDPPNENYGAFPM 81

Query: 69  TLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG------- 114
               + + +I+LL         A           +  +L  +++++ +IP +        
Sbjct: 82  IYGTIVSSLIALLIAVPLGLGTAIFLSEDFIPPSVRRILTFLVELLAAIPSVVYGLWGIF 141

Query: 115 ----FLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-------QVWNMTFSMYQSLCNIPR 163
               FL    ++F N        +   A   +F +        +  +T     SL ++P 
Sbjct: 142 VLIPFLRPIQMFFYNTLGWIPFFSTPPAGPGMFPAGVILAIMTLPIITVIARDSLASLPP 201

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT--VIP 221
           DL + S     + W   + + +P +  G+V  +M+ +       +A+ MI+       I 
Sbjct: 202 DLRQASIGLGATRWITIFQILIPAAFSGIVGGVMLGLGRAMGETMAATMIIGNSNRVNIS 261

Query: 222 LPGIGSYIALAIKEQ-------DLLAILYAMLTMLGVIFLYDQL 258
           L   G+ IA  +  Q        + A++YA + +  +  L + L
Sbjct: 262 LFAPGNTIASLMANQFPEASGLQVSALMYAGIVLFLLTLLVNVL 305



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 29/256 (11%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +N+  + R+       F   F+ L         + +    +        A Q  G     
Sbjct: 6   DNILNVGRSRTKAEKQFDSGFIWLTRIFAWGIAVILLLIALPIAQQALPALQKFGLGFLF 65

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI--WIGFR-----PHISSKIQPFAQ 423
            +  D     +     ++  +V  +IA +I +P+G+   I        P +   +    +
Sbjct: 66  TSAWDPPNENYGAFPMIYGTIVSSLIALLIAVPLGLGTAIFLSEDFIPPSVRRILTFLVE 125

Query: 424 LLAAFPANVF--------FPLV----------VSCVSYYHLNPN----LWLSLLMIFGTQ 461
           LLAA P+ V+         P +          +  + ++   P         +++   T 
Sbjct: 126 LLAAIPSVVYGLWGIFVLIPFLRPIQMFFYNTLGWIPFFSTPPAGPGMFPAGVILAIMTL 185

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I        ++ P D ++ +     T W     I++P  F   V G +   G A   +
Sbjct: 186 PIITVIARDSLASLPPDLRQASIGLGATRWITIFQILIPAAFSGIVGGVMLGLGRAMGET 245

Query: 522 IVSEVASWGHIHLRTT 537
           + + +       +  +
Sbjct: 246 MAATMIIGNSNRVNIS 261


>gi|329121031|ref|ZP_08249662.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|327471193|gb|EGF16647.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 217

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL--------GMVLVPILDIMQSIPI 112
           L +  + T   +  + ++S +       L   + +            L  I++I++SIP 
Sbjct: 9   LFKSLAETLYMLFVSSLLSAVIGIPLGILLVVTEKGKILSCSFCNKPLSFIVNIIRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++    +  G  IG   AAI  +  + +      +  S+  IP  L E ++S 
Sbjct: 68  FIILMVAIIPITRMIAGTSIGTN-AAIIPLTIASIPYTARLIETSVREIPVGLIEAAKSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S  Q    + +P ++P ++ N+
Sbjct: 127 GASPLQIIKKVIIPEALPSMIENI 150



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 53/157 (33%), Gaps = 12/157 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPA 430
           +      T++ + V  +++++I IP+GI +              +  +     ++ + P 
Sbjct: 9   LFKSLAETLYMLFVSSLLSAVIGIPLGILLVVTEKGKILSCSFCNKPLSFIVNIIRSIPF 68

Query: 431 NVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +    ++     ++   +  N  +  L I  +  Y    +       P    E A S  
Sbjct: 69  IILMVAIIPITRMIAGTSIGTNAAIIPLTI-ASIPYTARLIETSVREIPVGLIEAAKSMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            +  +  + +I+P   P  +             S ++
Sbjct: 128 ASPLQIIKKVIIPEALPSMIENITVVIVTLIGTSAMA 164


>gi|317406383|gb|EFV86606.1| binding-protein-dependent transport system inner membrane component
           [Achromobacter xylosoxidans C54]
          Length = 147

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++ R  V    A +I +P+G+ +G  P +S+ + PF Q L   P     PL V     
Sbjct: 63  ATSVARAGVAFAAAIVIGVPLGLLMGMSPALSAVLDPFVQFLRPLPKIALIPLTVVWFGI 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGA 472
              +       L+   +   IL    A  
Sbjct: 123 GEGSK----FFLIFIASFLSILVGAAAAV 147



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 35/88 (39%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           SL ++ + +  R   A   +++       L   S  L  VL P +  ++ +P +  +  T
Sbjct: 57  SLWEHTATSVARAGVAFAAAIVIGVPLGLLMGMSPALSAVLDPFVQFLRPLPKIALIPLT 116

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           VV+F      K     +A+  +I     
Sbjct: 117 VVWFGIGEGSKFFLIFIASFLSILVGAA 144


>gi|298250422|ref|ZP_06974226.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548426|gb|EFH82293.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 304

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM--VLVPILDIMQSIP-ILGFLTFTV 120
           +A  +    +   ++ +LF    A   ++   LG   +LV  L I Q  P +L  +    
Sbjct: 97  WAFNSFKIAILTTIVGVLFAAPAAYAVSRWNFLGKQTILVSFL-ITQMFPGVLLLVPLYN 155

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +Y          G  +A         VW M  + +     +P++L+E +    LS +Q F
Sbjct: 156 LYVQFNLIDNHYGLVIAYATTALPFSVW-MLKNFFD---TVPKELDEAAYVDGLSSFQTF 211

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDLL 239
           W + +P ++PG+      +    W   V +   +     + LP GI  Y+     +  LL
Sbjct: 212 WRIVLPLTIPGVAVVGFFNFMAAWNEFVLAFTFLNDAHNVTLPVGIKDYVHNFGADWHLL 271

Query: 240 AILYAMLTMLGVIFLY 255
                ++T+  +I   
Sbjct: 272 TAAAVLVTIPVLIVFL 287



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 59/205 (28%), Gaps = 5/205 (2%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL--A 426
            H    +          +    ++  I+  +   P    +     +  +       L   
Sbjct: 84  AHVLTDNGGIFFTWAFNSFKIAILTTIVGVLFAAPAAYAVSRWNFLGKQTI-LVSFLITQ 142

Query: 427 AFP-ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            FP   +  PL    V +  ++ +  L +        + ++ +       P +  E A  
Sbjct: 143 MFPGVLLLVPLYNLYVQFNLIDNHYGLVIAYATTALPFSVWMLKNFFDTVPKELDEAAYV 202

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIA 544
             ++ ++ +  I+LP   P            AWN   +     +  H      G+  Y+ 
Sbjct: 203 DGLSSFQTFWRIVLPLTIPGVAVVGFFNFMAAWNEFVLAFTFLNDAHNVTLPVGIKDYVH 262

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLAL 569
                         ++ +   ++ L
Sbjct: 263 NFGADWHLLTAAAVLVTIPVLIVFL 287


>gi|154503270|ref|ZP_02040330.1| hypothetical protein RUMGNA_01094 [Ruminococcus gnavus ATCC 29149]
 gi|153796264|gb|EDN78684.1| hypothetical protein RUMGNA_01094 [Ruminococcus gnavus ATCC 29149]
          Length = 286

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 70/183 (38%), Gaps = 6/183 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIV---DIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ F +++ +I  +L        P            +L    L      T L +L A+  
Sbjct: 32  IITFAVLLFLIAYILINGVPHIKPSLFAFEYTSENASLMPA-LINTIIMTLLSLLIAVPF 90

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +         A K  +   V+    + +  IP + +  F +++F+N        + LA 
Sbjct: 91  GIFSAIFLVEYAGKGNKFVEVIRLTTETLSGIPSIVYGLFGMLFFVNTLGWGF--SLLAG 148

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +    +  +  +  ++L  +P    E S        +  + + +P ++PG++  +++
Sbjct: 149 AFTLAIMILPLIMRTTEEALKAVPDSFREGSFGLGAGKLRTVFKIVLPSAIPGILAGIIL 208

Query: 199 SMS 201
           ++ 
Sbjct: 209 AVG 211



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F V+  +   I    + +I       +           +   +++ +++ +I +
Sbjct: 29  LGAIITFAVLLFLIAYILINGVPHIKPSLFAFEYTSENASLMPALINTIIMTLLSLLIAV 88

Query: 403 PVGI--------WIGFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWL 452
           P GI        + G        I+   + L+  P+ V+  F ++    +       L  
Sbjct: 89  PFGIFSAIFLVEYAGKGNKFVEVIRLTTETLSGIPSIVYGLFGMLFFVNTLGWGFSLLAG 148

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +  +       I+        A P+ F+E +        R    I+LP   P  + G I 
Sbjct: 149 AFTLAIMILPLIMRTTEEALKAVPDSFREGSFGLGAGKLRTVFKIVLPSAIPGILAGIIL 208

Query: 513 ACG 515
           A G
Sbjct: 209 AVG 211


>gi|53714047|ref|YP_100039.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
 gi|60682242|ref|YP_212386.1| phosphate transport system permease protein [Bacteroides fragilis
           NCTC 9343]
 gi|253564689|ref|ZP_04842145.1| phosphate transport system permease [Bacteroides sp. 3_2_5]
 gi|265766334|ref|ZP_06094375.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_16]
 gi|52216912|dbj|BAD49505.1| putative ABC transporter permease protein [Bacteroides fragilis
           YCH46]
 gi|60493676|emb|CAH08465.1| phosphate transport system permease protein [Bacteroides fragilis
           NCTC 9343]
 gi|251946154|gb|EES86531.1| phosphate transport system permease [Bacteroides sp. 3_2_5]
 gi|263254002|gb|EEZ25467.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_16]
 gi|301163720|emb|CBW23274.1| phosphate transport system permease protein [Bacteroides fragilis
           638R]
          Length = 291

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 68/183 (37%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +++  I+  +++          +       +    +      T   M+ + + +  
Sbjct: 26  LCIVLILFAILGFIIYKGIGVISWDFLTTAPTDGMTGGGIWPAIVGTFYLMVGSALFAFP 85

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A   +L   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 86  VGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SILAG 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 144 SLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLIL 203

Query: 199 SMS 201
           ++ 
Sbjct: 204 ALG 206



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  GI   S  ++    T       IW   +  F ++V    +++   
Sbjct: 28  IVLILFAILGFIIYKGIGVISWDFLTTAPTDGMTGGGIWPAIVGTFYLMVG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           PVG+  G           +   I+     L+  P+ VF    ++    Y    +  L+  
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGDSILAGS 144

Query: 456 MIFG--TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  G      ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|325677381|ref|ZP_08157046.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Rhodococcus equi ATCC 33707]
 gi|325551844|gb|EGD21541.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Rhodococcus equi ATCC 33707]
          Length = 318

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 4/193 (2%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKV 131
           +    + LL     +   A+    G  +V  + +  S+ P +  +T     F +      
Sbjct: 119 VVTTAVGLLLGVFASYALARIEFRGKYIVTGIILGASMFPTVALMTPLFQLFGDFG---W 175

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           IG   A I    +  +    +++   L ++P +LEE +R    S +Q F  + +P + P 
Sbjct: 176 IGQYQALIIPNISFVLPLTIYTLTSFLSDLPWELEEAARIDGASRFQAFRLVILPLAAPA 235

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L    +++    W   + + ++    T      I  +      EQ   AI+ A   +   
Sbjct: 236 LFTTAILAFIATWNEFMLASLLSTEKTEPVTVAIARFAGANSWEQPYAAIMAAGTIVTIP 295

Query: 252 IFLYDQLLFRPMI 264
           + +   L  R ++
Sbjct: 296 LVIMVLLFQRRIV 308



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 6/222 (2%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS- 416
              + ++       +       +     ++   VV   +  ++ +     +         
Sbjct: 86  WPTYLTLDNFRAALSTDKGNDFLGAIVNSLVIGVVTTAVGLLLGVFASYALARIEFRGKY 145

Query: 417 KIQPFAQLLAAFPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
            +       + FP      PL      +  +     L +  I       ++ + +  S  
Sbjct: 146 IVTGIILGASMFPTVALMTPLFQLFGDFGWIGQYQALIIPNISFVLPLTIYTLTSFLSDL 205

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P + +E A     + ++ +R +ILP   P   T AI A    WN  +++ + S       
Sbjct: 206 PWELEEAARIDGASRFQAFRLVILPLAAPALFTTAILAFIATWNEFMLASLLSTEKTEPV 265

Query: 536 TTGLGAYI-AESTEKGSFPEVVLGVLI---MCCFVLALNRFL 573
           T  +  +  A S E+     +  G ++   +   VL   R +
Sbjct: 266 TVAIARFAGANSWEQPYAAIMAAGTIVTIPLVIMVLLFQRRI 307


>gi|317970300|ref|ZP_07971690.1| putative phosphate ABC transporter [Synechococcus sp. CB0205]
          Length = 315

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 105/280 (37%), Gaps = 35/280 (12%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           RR+   +  L+  VLV GI+  +L G ++      +  +V    D       A       
Sbjct: 24  RRLVVILASLVGLVLV-GILLTVLWGSRDAMAEFGLSFLVVSDWDPGLNSYGALTAIYGT 82

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTV-- 120
           + + ++++L         A              V+  +++++ +IP +    +  F +  
Sbjct: 83  MVSSLLAILIAVPLGVGTAIFITENLIPSGYRQVIGLMVELLAAIPSVVLGLWAIFVMEP 142

Query: 121 ------------VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEE 167
                       + +M  +  + +G  +A    I    +  +  ++   SL  +P +L +
Sbjct: 143 FLRPILQVLHNQLGWMPFFATEPLGPGMAPAVLILVVMILPIITAIARDSLQQVPNELRQ 202

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---- 223
            +     + WQ    + +P ++ G+   +M+++       +A  MI+       L     
Sbjct: 203 AAYGVGTTRWQAIVQVILPAAVSGITGGVMLALGRAMGETMAVTMIIGNSNNFSLSLLAP 262

Query: 224 --GIGSYIALAIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              I + +A    E D   + A++YA   ++ +  + + L
Sbjct: 263 ANTISAMLANQFGEADGIQISALMYAAFVLMIMTLIVNVL 302



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 79/228 (34%), Gaps = 12/228 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQ 423
            I         +++      + +R V+ +++  +  IP  + +G      +   ++P  Q
Sbjct: 91  LIAVPLGVGTAIFITENLIPSGYRQVIGLMVELLAAIP-SVVLGLWAIFVMEPFLRPILQ 149

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L       + P   +      + P + + ++MI      I           PN+ ++ A
Sbjct: 150 VLHN--QLGWMPFFATEPLGPGMAPAVLILVVMILPIITAI---ARDSLQQVPNELRQAA 204

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL---- 539
                T W+    +ILP        G + A G A   ++   +      +   + L    
Sbjct: 205 YGVGTTRWQAIVQVILPAAVSGITGGVMLALGRAMGETMAVTMIIGNSNNFSLSLLAPAN 264

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                 + + G    + +  L+   FVL +   + + L  +  R L L
Sbjct: 265 TISAMLANQFGEADGIQISALMYAAFVLMIMTLIVNVLAQWIVRRLSL 312


>gi|116248934|ref|YP_764775.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253584|emb|CAK11976.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 285

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           ++   + L    + Q    +       + +S+L         A+    G     +L ++ 
Sbjct: 69  LEPFILFLKTEGVVQSFLNSLGAAGITVALSILLGAPAGYALARYDFRGKDSYRLLVLLT 128

Query: 109 SIPILGFL--TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
               L  L    TV +        ++G  L                        +P++LE
Sbjct: 129 RAFPLAILALPLTVSFIRLGLYDTILGVGLIHTVLALPFA----ALVTQGIFLGVPKELE 184

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +  F  +  Q F+ +  P ++PG+V   + +    W  V A+ ++ V +  +      
Sbjct: 185 EAAWVFGCTRIQAFFKVVAPLALPGIVATAVFAFVISWNEVFAASVLTVRNRTLT----- 239

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           +Y+   + E  +       L ++    ++   + R +  
Sbjct: 240 AYLLTVLSESPMHYRFAGGLMLILPSVVFIFAVRRYLFA 278



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 2/156 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFP-ANVFFPLVVSCVSY 443
           ++    + + ++ ++  P G  +               LL  AFP A +  PL VS +  
Sbjct: 88  SLGAAGITVALSILLGAPAGYALARYDFRGKDSYRLLVLLTRAFPLAILALPLTVSFIRL 147

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L + L+       +            P + +E A  F  T  + +  ++ P   
Sbjct: 148 GLYDTILGVGLIHTVLALPFAALVTQGIFLGVPKELEEAAWVFGCTRIQAFFKVVAPLAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           P  V  A+ A   +WN    + V +  +  L    L
Sbjct: 208 PGIVATAVFAFVISWNEVFAASVLTVRNRTLTAYLL 243


>gi|307719472|ref|YP_003875004.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306533197|gb|ADN02731.1| transporter [Spirochaeta thermophila DSM 6192]
          Length = 239

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVY 122
             +  + +L +  ++  F      L  + R   ++  +  ++  +Q+IP +  +TF V  
Sbjct: 52  LLQHVVMVLVSSAVAAAFGLGVGILVTRPRFSYLLEGVQSVVAGIQTIPPVAVITFAVPA 111

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +          A+ A+F   +     +    +  +   ++E +R   +        
Sbjct: 112 LGFGF--------APAVAALFLYGMLPPLNNTIAGMRAVDPSVKEAARGMGMEPGGILRE 163

Query: 183 LGVPFSMPGLVWNMMMSM 200
           + +P + P ++  +  S+
Sbjct: 164 VELPLAWPVILAGLRTSV 181



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 6/127 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPH--ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           V+V   +A+   + VGI +       +   +Q     +   P        V  + +    
Sbjct: 59  VLVSSAVAAAFGLGVGILVTRPRFSYLLEGVQSVVAGIQTIPPVAVITFAVPALGFGFAP 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               L L  +       L N IAG  A     KE A    +      R + LP  +P  +
Sbjct: 119 AVAALFLYGML----PPLNNTIAGMRAVDPSVKEAARGMGMEPGGILREVELPLAWPVIL 174

Query: 508 TGAITAC 514
            G  T+ 
Sbjct: 175 AGLRTSV 181


>gi|315925810|ref|ZP_07922017.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620919|gb|EFV00893.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 233

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 17/203 (8%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---------ILDIMQSIPI 112
           P     T      A  ++++       L     + G++ +P         I+++++S+P 
Sbjct: 22  PLALWETVYITFVATALAIVIGLPLGILLVVGDKDGVLPLPRGLMHGLGIIINLLRSVPF 81

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   +     +    +     A+I  +  +    +   +  SL  +  ++ E ++S 
Sbjct: 82  LILMILVIPLTRAIVGTSI--GTTASIVPLVIASFPFVARLVESSLREVDPNIVEAAQSM 139

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S +Q    + +P S+P LV N  ++++    +   S +I  G         G Y    
Sbjct: 140 GASPFQIITKVMIPESVPSLVSNATIAITTILSYSAMSGIIGGGGLGKIAINYGYY---- 195

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
                 L ++ A++ ++ ++ ++
Sbjct: 196 --RYKYLVMVAAVILLIVLVQIF 216



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 19/196 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG---------FRPHISSKIQPFAQLLAAFPANVFFPL 436
           T++   V   +A +I +P+GI +              +   +     LL + P  +   L
Sbjct: 28  TVYITFVATALAIVIGLPLGILLVVGDKDGVLPLPRGLMHGLGIIINLLRSVPFLILMIL 87

Query: 437 VVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+     +    +     +  L+I  +  ++   V +       +  E A S   + ++ 
Sbjct: 88  VIPLTRAIVGTSIGTTASIVPLVI-ASFPFVARLVESSLREVDPNIVEAAQSMGASPFQI 146

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  V+ A  A     + S +S +   G +       G Y      +  + 
Sbjct: 147 ITKVMIPESVPSLVSNATIAITTILSYSAMSGIIGGGGLGKIAINYGYY------RYKYL 200

Query: 554 EVVLGVLIMCCFVLAL 569
            +V  V+++   V   
Sbjct: 201 VMVAAVILLIVLVQIF 216


>gi|213649082|ref|ZP_03379135.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 133

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           AI A+F + +  +  + Y  LC++P  L E +    ++ WQ+   + +P + P ++  + 
Sbjct: 7   AIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIR 66

Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257
           ++         A    ++G +       G  I   I   D   ++           + D 
Sbjct: 67  IA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALILDT 119

Query: 258 LL 259
           LL
Sbjct: 120 LL 121



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +    + +   +   I+ N  AG  + P    E A+   +T W+  R + LP  +P  ++
Sbjct: 4   DTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLS 63

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           G   A   A N          G         G  I        FP ++LG      F L 
Sbjct: 64  GIRIA--TAINVGTAPLAFLIGASSY-----GELIFPGIYLNDFPTLILGATATALFALI 116

Query: 569 LNRFL 573
           L+  L
Sbjct: 117 LDTLL 121


>gi|149182008|ref|ZP_01860494.1| phosphate ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850273|gb|EDL64437.1| phosphate ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 321

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
               + + VI++        ++A       S ++   L PIL+I+  IP + +  F   +
Sbjct: 98  LTGTIISSVIAMFVAIPVGLMSAVYLSEYASEKVRKTLKPILEILAGIPTIVYGFFAFTF 157

Query: 123 FMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQ 178
              L    + G E   I     +    +  M  S+   ++ ++P  + E + +   +  +
Sbjct: 158 VTPLLRSFIPGLEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNSMREGALALGATKLE 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
             W + +P ++ G++ + ++ +S  
Sbjct: 218 VTWKVVIPAAISGIISSFVLGISRA 242



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 82/226 (36%), Gaps = 31/226 (13%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF----FPL 436
           +   ++  +IA  + IPVG+             +   ++P  ++LA  P  V+    F  
Sbjct: 98  LTGTIISSVIAMFVAIPVGLMSAVYLSEYASEKVRKTLKPILEILAGIPTIVYGFFAFTF 157

Query: 437 VVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVI----AGASAFPNDFKEVASSFHITG 490
           V   +  +   L P   LS  ++ G    I+  V        S+ PN  +E A +   T 
Sbjct: 158 VTPLLRSFIPGLEPTNILSPGIVMGIM--IIPMVASLSEDAMSSVPNSMREGALALGATK 215

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH------IHLRTTGLGAYIA 544
                 +++P      ++  +     A   +++  +AS  +      I      + AYI 
Sbjct: 216 LEVTWKVVIPAAISGIISSFVLGISRAIGETMIVTIASGSNKNFTFDITQSMQTMTAYIV 275

Query: 545 EST----EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           E T      G+     L  + M  FV  L   L   +  Y +R  R
Sbjct: 276 EVTGGEAAAGTTIYYSLYAVAMTLFVFTLIMNL---IAQYISRRFR 318


>gi|298674022|ref|YP_003725772.1| phosphate ABC transporter inner membrane subunit PstA
           [Methanohalobium evestigatum Z-7303]
 gi|298287010|gb|ADI72976.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanohalobium evestigatum Z-7303]
          Length = 283

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 76/211 (36%), Gaps = 11/211 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS--RTTLRMLSAMVIS 79
           LL     +G+ ++ +             D+  I       P+ A      +  +  M++ 
Sbjct: 18  LLVIATCVGVASLAILVYSVLEDSIGWFDLAFIFNSPSRFPEEAGIYPALIGSIYLMLLV 77

Query: 80  LLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +F+F      A          R+  ++   +  + ++P + +    +  F+      + 
Sbjct: 78  AVFSFPLGVGTAIYLEEYAGQSRIKNIIELNISNLAAVPSIVYGLLGLALFVRAL--NMG 135

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + +A    +    +  +  S  +++  +P  L + S     + WQ    + +P ++PG+
Sbjct: 136 RSLIAGALTLTLLILPIVIVSSQEAIKAVPDSLRDASYGIGATKWQTIRKIVIPEALPGI 195

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +   ++S+S          MI    ++   P
Sbjct: 196 MTGTILSLSRAIGETAPLIMIGAATSMYSAP 226



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 71/197 (36%), Gaps = 6/197 (3%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
               V   +   I W  + +I N  + + +   +      +++ ++++ + +  + +   
Sbjct: 30  LAILVYSVLEDSIGWFDLAFIFNSPSRFPEEAGIYPALIGSIYLMLLVAVFSFPLGVGTA 89

Query: 406 IWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGT 460
           I++     +  I + I+     LAA P+ V+    L +   +       +  +L +    
Sbjct: 90  IYLEEYAGQSRIKNIIELNISNLAAVPSIVYGLLGLALFVRALNMGRSLIAGALTLTLLI 149

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              ++ +      A P+  ++ +     T W+  R I++P   P  +TG I +   A   
Sbjct: 150 LPIVIVSSQEAIKAVPDSLRDASYGIGATKWQTIRKIVIPEALPGIMTGTILSLSRAIGE 209

Query: 521 SIVSEVASWGHIHLRTT 537
           +    +           
Sbjct: 210 TAPLIMIGAATSMYSAP 226


>gi|258622177|ref|ZP_05717203.1| phosphate ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262173163|ref|ZP_06040840.1| phosphate transport system permease protein PstC [Vibrio mimicus
           MB-451]
 gi|258585501|gb|EEW10224.1| phosphate ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261890521|gb|EEY36508.1| phosphate transport system permease protein PstC [Vibrio mimicus
           MB-451]
          Length = 306

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+    +   +  I L    LP  A      
Sbjct: 28  KERIFHGLFLTSAVIGIVSLAIIAYFIVRESIPAFEEAGLSGIVLGQDWLPP-ALYGVAT 86

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S    ++       L A        +R+  V+ P ++++  IP + +    L 
Sbjct: 87  MIVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLV 146

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 147 IIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSI 206

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 207 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    ++    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|297566510|ref|YP_003685482.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
 gi|296850959|gb|ADH63974.1| binding-protein-dependent transport systems inner membrane
           component [Meiothermus silvanus DSM 9946]
          Length = 267

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 14/249 (5%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC- 384
           H P N   L  N+ V +++       +  V   +   S          ++ L    L   
Sbjct: 6   HPPRNAPPLWKNEGVRWLVFAGVALGLWEVGARLYHSSFLLPAPSRILEEFLKTPALVLA 65

Query: 385 ---ITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSC 440
              IT   +V+  ++ +++     + +   P  +   I      L + P      LVV  
Sbjct: 66  HAWITTQEIVLGFVLGALVAHLAALLLIVLPEWLEDFIFRAVSTLNSIPFVALASLVVVW 125

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    +   + ++ L  F    Y    V  G  +     +E+ +S+  + ++  RY+ LP
Sbjct: 126 LGVNGIGSKVAIAALYAFFALVYF---VHKGMVSTDATKEELLTSYSASFFQRVRYLKLP 182

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560
              P   T    A   A N +IV E+           GLG  I +S   G+   V L  +
Sbjct: 183 FALPIIFTSLKGAAMAAVNGAIVGELFG------AFQGLGFMILDSRYVGNTARVFLAAV 236

Query: 561 IMCCFVLAL 569
                   L
Sbjct: 237 FCTVVGWLL 245



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 19/244 (7%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87
           +  +   L H       P  I++          +  +A  TT  ++   V+  L   + A
Sbjct: 32  LWEVGARLYHSSFLLPAPSRILE--EFLKTPALVLAHAWITTQEIVLGFVLGALVAHLAA 89

Query: 88  TLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
            L       L   +   +  + SIP +   +  VV+      G  +              
Sbjct: 90  LLLIVLPEWLEDFIFRAVSTLNSIPFVALASLVVVWLGVNGIGSKVAIAA-------LYA 142

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
            + + + +++ + +     EE+  S+  S +Q+  YL +PF++P +  ++  +       
Sbjct: 143 FFALVYFVHKGMVSTDATKEELLTSYSASFFQRVRYLKLPFALPIIFTSLKGAAMAAVNG 202

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY---DQLLFRPM 263
            +  E+           G+G  I  +    +   +  A +    V +L       L R  
Sbjct: 203 AIVGELFG------AFQGLGFMILDSRYVGNTARVFLAAVFCTVVGWLLLGVLTALERRF 256

Query: 264 IVWS 267
           + W 
Sbjct: 257 VGWH 260


>gi|116873861|ref|YP_850642.1| phosphate ABC transporter, ATP-binding protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742739|emb|CAK21863.1| phosphate ABC transporter, ATP-binding protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 294

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 9/215 (4%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTL 70
           +I   +F  +A  +VI +  +L + + +         +   P +      +      +  
Sbjct: 8   KIATGVFYAIAVFIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFY 67

Query: 71  RMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+   
Sbjct: 68  MLVITMIISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFVIQM 127

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                    A    IF   +  +   + ++L  IP    E   +  LS W+    + VP 
Sbjct: 128 GWSFSVISGALTLTIFNLPL--LIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPA 185

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 186 ALPAIITGVILA-AGRVFGEAAALIFTAGQSTPIL 219



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
            + +F   ++ G+   I  + +  +   F  T              ++    +++I  II
Sbjct: 16  AIAVFIVIILAGLLGYILVKGVPQLSWKFLTTPPQSFQAGGGIGPEIWNSFYMLVITMII 75

Query: 401 WIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++      +          ++L++ P+     +VV    +      +  S
Sbjct: 76  SVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVVGLFGFLVFVIQMGWS 130

Query: 454 LLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             +I G     +FN       V    +A PN  +E   +  ++ W     +++P   P  
Sbjct: 131 FSVISGALTLTIFNLPLLIRVVEEALNAIPNTQREAGLALGLSRWETITRVLVPAALPAI 190

Query: 507 VTGAITACGGAWN 519
           +TG I A G  + 
Sbjct: 191 ITGVILAAGRVFG 203


>gi|260892360|ref|YP_003238457.1| phosphate ABC transporter, inner membrane subunit PstC [Ammonifex
           degensii KC4]
 gi|260864501|gb|ACX51607.1| phosphate ABC transporter, inner membrane subunit PstC [Ammonifex
           degensii KC4]
          Length = 301

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 84/208 (40%), Gaps = 15/208 (7%)

Query: 74  SAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF---TVVYFMNLYP 128
            A +IS  F    A   ++   +    VL P+++++  IP + +       +V F+  + 
Sbjct: 90  LATLISTPFGIAVAVFISEIAPKVGQRVLQPVIELLAGIPSVVYGYIGLSVLVPFIRNHL 149

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + LA +  +    +  +      SL ++   L E + +   + WQ    + +P +
Sbjct: 150 GGTGFSLLAGVLVLSVMILPTIASVATDSLRSLSHILRETAYALGATRWQMIRLVLLPAA 209

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----------LPGIGSYIALAIKEQDL 238
             G++  ++++++  +   +A +M++      P            GI  Y+   ++    
Sbjct: 210 RTGILTGVVLALARAFGEALAVQMVIGNIPNSPTSLLIPIITLTSGITMYMGNTVQGSLW 269

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
              L+ M  +L +   +  +L R +  W
Sbjct: 270 NDALWFMGLILLITSFFFIILVRYVGKW 297



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 13/166 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           ++  +V+  +A++I  P GI +               +QP  +LLA  P+ V+  + +S 
Sbjct: 81  LYGSIVVSTLATLISTPFGIAVAVFISEIAPKVGQRVLQPVIELLAGIPSVVYGYIGLSV 140

Query: 441 VS------YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
           +             +L   +L++       + +V      +  +  +E A +   T W+ 
Sbjct: 141 LVPFIRNHLGGTGFSLLAGVLVLSVMILPTIASVATDSLRSLSHILRETAYALGATRWQM 200

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            R ++LP      +TG + A   A+  ++  ++      +  T+ L
Sbjct: 201 IRLVLLPAARTGILTGVVLALARAFGEALAVQMVIGNIPNSPTSLL 246


>gi|149202578|ref|ZP_01879550.1| ABC phosphate transporter, inner membrane subunit PstA [Roseovarius
           sp. TM1035]
 gi|149143860|gb|EDM31894.1| ABC phosphate transporter, inner membrane subunit PstA [Roseovarius
           sp. TM1035]
          Length = 450

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 63/162 (38%), Gaps = 6/162 (3%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLV 101
               D      +   L      +   ML  +V+SL      +      A K+R   ++ V
Sbjct: 209 FTAPDASDTRPEAAGLGVAIIGSAYMMLIVLVLSLPLGVAASIYLEEFAPKNRWTDLIEV 268

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I + + ++P + F    +  F+N+  G    A +     +    +  +  +   +L ++
Sbjct: 269 NISN-LAAVPSIVFGILGLAIFINMV-GLPQSAPIVGGLVLTLMTLPTIIIATRAALKSV 326

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           P  + + +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 327 PPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQA 368



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 25/205 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++I  ++ +P+G+               +  I+     LAA P+ VF  L ++    
Sbjct: 232 AYMMLIVLVLSLPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGILGLAIFIN 291

Query: 444 YHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               P        L++   T   I+    A   + P   ++ A     +  +   + +LP
Sbjct: 292 MVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLP 351

Query: 501 GIFPYYVTGAITACGGAWNA---SIVSEVASWGHIHLRTTGLGAY---------IAESTE 548
              P  +TGAI     A       ++  + ++   +      G +         +   T+
Sbjct: 352 LAMPGILTGAIIGLAQALGETAPLLLIGMVAFVREYPAGPPEGFFDPAAALPVQVYNWTQ 411

Query: 549 KGS---FPEVVLGVLIMCCFVLALN 570
           +G           ++++  F++ +N
Sbjct: 412 RGDPAFVERASGAIIVLLVFLVIMN 436


>gi|209547470|ref|YP_002279388.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538714|gb|ACI58648.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 271

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++LL         A+ +     +  ++ I +  P L FL    + F
Sbjct: 69  YLWNSVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLF 126

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L     +  ++     +    V  +    ++     P +LEE +     + WQ F  +
Sbjct: 127 QWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFE---TTPMELEEAASIDGATPWQIFRLV 183

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 184 ALPIAKPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 241

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      R ++ 
Sbjct: 242 AALIVTLPVLILTVFTQRQIVA 263



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 73  SVLVTGAATLLALLIGVPAGYGIARLKAEKSAM--VIMIARMTPGLSFLIPLFLLFQWLN 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   L   +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 131 LLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQIFRLVALPIAKP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 191 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 248

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 249 PVLILTVFTQR 259


>gi|110681156|ref|YP_684163.1| Fe-ABC transporter, permease component [Roseobacter denitrificans
           OCh 114]
 gi|109457272|gb|ABG33477.1| Fe-ABC transporter, permease component [Roseobacter denitrificans
           OCh 114]
          Length = 551

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 62/475 (13%), Positives = 132/475 (27%), Gaps = 71/475 (14%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-----GFL------ 116
           T    +   + + L     A   A+    G   +  L I+  +         ++      
Sbjct: 67  TLFVGVLGTLGACLIGIPLAFFTARFHLRGRAWISTLAILVLVAPPFIGAYAWIMMLGAN 126

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLS 175
            F   +F  +            I  +FT + +   F M Q +L  + +  E+ + S   +
Sbjct: 127 GFITNFFEAIGIETPTIYGAHGIILVFTLKFFPFVFLMTQTALMAVNKSFEDAAESLGCT 186

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            WQ+F  + +P   P +    ++               +       + G G      I  
Sbjct: 187 PWQRFTKITLPLVFPAISTGAIICFVLS----------IADFGTPAILGRGFRTLSTIAF 236

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295
               + L  + TM   + +   ++                         +L L  +   L
Sbjct: 237 AAYRSELGGLPTMAVTVSMIMIII------------------------SMLALLAQRRIL 272

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
               Y+S     P+   +    R + V    F    + +     +  +   F        
Sbjct: 273 AKRRYASSLTNLPVKARLTG-WRNIAV--HSFCHGVVLIAMLPTLVVVYTSFLKTNGPVF 329

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
             G  ++S   I+           ++     +   +   +I+ +I               
Sbjct: 330 VGGYGFESYERILRTAPDAITNSFVFAIAAVILITMFSALISYVI-----------VRRE 378

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSY---------YHLNPNLWLSLLMIFGTQWYILF 466
           +        L   P     P VV  + +           ++   +L LL       Y + 
Sbjct: 379 TTASGTIDFLMMVP--YLIPGVVMAIGFVTTFRSGFMGGMSAAWFLILLYFIRRLPYGVR 436

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +  +         +E A +        +  I +P I P  + G++     A N  
Sbjct: 437 STTSSLRQIKPSMEEAAINLGAPPLSAFLKITIPLILPGLIVGSLMGFITAINEL 491



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 21/216 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN---VFFPLVVSCVS 442
           T+F  V+  + A +I IP+  +                +L          +  +++   +
Sbjct: 67  TLFVGVLGTLGACLIGIPLAFFTARFHLRGRAWISTLAILVLVAPPFIGAYAWIMMLGAN 126

Query: 443 YYHLNPNLWL------------SLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHIT 489
            +  N    +             +L+     +  +         A    F++ A S   T
Sbjct: 127 GFITNFFEAIGIETPTIYGAHGIILVFTLKFFPFVFLMTQTALMAVNKSFEDAAESLGCT 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+ +  I LP +FP   TGAI     +        +   G   L T    A+ A  +E 
Sbjct: 187 PWQRFTKITLPLVFPAISTGAIICFVLSIADFGTPAILGRGFRTLSTI---AFAAYRSEL 243

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G  P + + V ++   +  L       +     R  
Sbjct: 244 GGLPTMAVTVSMIMIIISMLALLAQRRI--LAKRRY 277



 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           P   + + +  ++A+++  +F+ + + +  +           +D +  +P L       +
Sbjct: 346 PDAITNSFVFAIAAVILITMFSALISYVIVRRETTASG---TIDFLMMVPYLIPGVVMAI 402

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNM---TFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            F+  +    +G   AA F I    +  +     S   SL  I   +EE + +       
Sbjct: 403 GFVTTFRSGFMGGMSAAWFLILLYFIRRLPYGVRSTTSSLRQIKPSMEEAAINLGAPPLS 462

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
            F  + +P  +PGL+   +M     
Sbjct: 463 AFLKITIPLILPGLIVGSLMGFITA 487


>gi|317501388|ref|ZP_07959588.1| phosphate ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088151|ref|ZP_08337071.1| phosphate ABC transporter [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316897204|gb|EFV19275.1| phosphate ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408807|gb|EGG88270.1| phosphate ABC transporter [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 286

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 72/182 (39%), Gaps = 5/182 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           F +L F++   +IN + H         +          V +L      T L +L A+   
Sbjct: 35  FSVLLFLIAYILINGVPHIKLSL---FEWNYTSENASVVPALINTIVMTILSLLIAVPFG 91

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +         + K  +   V+    + +  IP + +  F +++F+N        + LA  
Sbjct: 92  IFSAIFLVEYSGKGNKFVEVIRLTTETLSGIPSIVYGLFGMLFFVNTLDWGF--SILAGA 149

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +    +  +  +  ++L ++P    E S        +  + + +P ++PG++  ++++
Sbjct: 150 FTLSIMILPLIMRTTEEALKSVPDSYREGSFGLGAGKLRTVFRIVLPSAVPGILAGVILA 209

Query: 200 MS 201
           + 
Sbjct: 210 IG 211



 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +  F V+  +   I    + +I       +           +   +V+ I++ +I +
Sbjct: 29  LGALLTFSVLLFLIAYILINGVPHIKLSLFEWNYTSENASVVPALINTIVMTILSLLIAV 88

Query: 403 PVGI--------WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLS 453
           P GI        + G        I+   + L+  P+ V+    +           ++   
Sbjct: 89  PFGIFSAIFLVEYSGKGNKFVEVIRLTTETLSGIPSIVYGLFGMLFFVNTLDWGFSILAG 148

Query: 454 LLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +      ++         + P+ ++E +        R    I+LP   P  + G I 
Sbjct: 149 AFTLSIMILPLIMRTTEEALKSVPDSYREGSFGLGAGKLRTVFRIVLPSAVPGILAGVIL 208

Query: 513 ACG 515
           A G
Sbjct: 209 AIG 211


>gi|85373910|ref|YP_457972.1| phosphate ABC transporter permease [Erythrobacter litoralis
           HTCC2594]
 gi|84786993|gb|ABC63175.1| probable phosphate ABC transporter, permease protein (PstA)
           [Erythrobacter litoralis HTCC2594]
          Length = 412

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +  M+++L   F    LAA          R   +L   ++ + ++P + F    +  F+ 
Sbjct: 198 ILTMLVTLALAFPIGVLAALYLEEYAPKNRWTDILEVSINNLAAVPSIIFGLLGLAVFLT 257

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P       +  +  +    +  +  S   ++  +P  + + + +   S  Q  ++  +
Sbjct: 258 IFPNMRSAPLIGGM-TLALMTMPVIVISGRNAIKAVPPSIRDGALAVGASPVQVVFHHVL 316

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++PG++   ++ M+  
Sbjct: 317 PLALPGILTGTIIGMARA 334



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 14/150 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +++   +  P+G+               +  ++     LAA P+ +F   ++    +
Sbjct: 198 ILTMLVTLALAFPIGVLAALYLEEYAPKNRWTDILEVSINNLAAVPSIIFG--LLGLAVF 255

Query: 444 YHLNPNLWLSLLM-----IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + PN+  + L+        T   I+ +      A P   ++ A +   +  +   + +
Sbjct: 256 LTIFPNMRSAPLIGGMTLALMTMPVIVISGRNAIKAVPPSIRDGALAVGASPVQVVFHHV 315

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           LP   P  +TG I     A   +    +  
Sbjct: 316 LPLALPGILTGTIIGMARALGETAPLLMIG 345


>gi|294102662|ref|YP_003554520.1| phosphate ABC transporter, inner membrane subunit PstA
           [Aminobacterium colombiense DSM 12261]
 gi|293617642|gb|ADE57796.1| phosphate ABC transporter, inner membrane subunit PstA
           [Aminobacterium colombiense DSM 12261]
          Length = 283

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYA-TLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVV 121
              T   ++ +M+ SL         LA  SR+     +L   +  +  +P + F  F + 
Sbjct: 63  LMGTLQLVVVSMLFSLPVGIATGLYLAEYSRKGQFTALLRLAIRSLAGVPSVVFGLFGLS 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+ L   K   + L+A   +    +  +  +  Q+   +P+D    S +   S WQ  W
Sbjct: 123 LFVILL--KFGSSLLSAGLTLGCLALPLIVTASEQAFLAVPQDYRAASYALGASKWQTIW 180

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            +  P +   ++   ++S+ 
Sbjct: 181 KVVFPAASSTIITGGILSIG 200



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 8/179 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           T+  VVV ++ +  + I  G+++         ++ ++   + LA  P+ VF    +S   
Sbjct: 66  TLQLVVVSMLFSLPVGIATGLYLAEYSRKGQFTALLRLAIRSLAGVPSVVFGLFGLSLFV 125

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIA--GASAFPNDFKEVASSFHITGWRWWRYIILP 500
                 +  LS  +  G     L    +     A P D++  + +   + W+    ++ P
Sbjct: 126 ILLKFGSSLLSAGLTLGCLALPLIVTASEQAFLAVPQDYRAASYALGASKWQTIWKVVFP 185

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
                 +TG I + G        +    +      T G+   + +      +  +VL  
Sbjct: 186 AASSTIITGGILSIGRVAG---ETAPIIFTGAAYFTPGVAKSVFDEVMALPYHIMVLAT 241


>gi|239945781|ref|ZP_04697718.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptomyces roseosporus NRRL 15998]
 gi|239992252|ref|ZP_04712916.1| phosphate ABC transporter, inner membrane subunit PstC
           [Streptomyces roseosporus NRRL 11379]
 gi|291449239|ref|ZP_06588629.1| phosphate ABC transporter [Streptomyces roseosporus NRRL 15998]
 gi|291352186|gb|EFE79090.1| phosphate ABC transporter [Streptomyces roseosporus NRRL 15998]
          Length = 316

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 28/218 (12%)

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF-------LTF 118
            L   +I+LL        AA       ++R+  +  P+L+++  IP + +       +T 
Sbjct: 92  TLMVTLIALLVAVPLGLGAAVYLSEYANKRVRKIFKPLLEVLAGIPTVVYGFFALKAITP 151

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +        G  I   LAA F +    +  +      S+  +PR L + + +   S  Q
Sbjct: 152 VLQTIWPAGDGPQIFNALAAGFVMGIMIIPTIASLAEDSMSAVPRALRDGAFALGSSRMQ 211

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------------DTVIPLP 223
               +  P ++ G+V  +++ +S      +   +   G                  I   
Sbjct: 212 VSTRVVFPAALSGIVAAVVLGISRALGETMIVAIAAGGQPNLSFNPLEGMQTMTAFIAAA 271

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           GIG     +   Q + A+   +  M  V+ L    L R
Sbjct: 272 GIGDLPTGSTGYQTIFAVGALLFVMTLVMNLLSIRLVR 309



 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 72/217 (33%), Gaps = 32/217 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPL 436
           +++ +IA ++ +P+G+             +    +P  ++LA  P  V+         P+
Sbjct: 93  LMVTLIALLVAVPLGLGAAVYLSEYANKRVRKIFKPLLEVLAGIPTVVYGFFALKAITPV 152

Query: 437 V--VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
           +  +          N   +  ++       + ++     SA P   ++ A +   +  + 
Sbjct: 153 LQTIWPAGDGPQIFNALAAGFVMGIMIIPTIASLAEDSMSAVPRALRDGAFALGSSRMQV 212

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR---------------TTG 538
              ++ P      V   +     A   +++  +A+ G  +L                  G
Sbjct: 213 STRVVFPAALSGIVAAVVLGISRALGETMIVAIAAGGQPNLSFNPLEGMQTMTAFIAAAG 272

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
           +G     ST   +   V   + +M   +  L+  L  
Sbjct: 273 IGDLPTGSTGYQTIFAVGALLFVMTLVMNLLSIRLVR 309


>gi|218779279|ref|YP_002430597.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760663|gb|ACL03129.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfatibacillum alkenivorans AK-01]
          Length = 310

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 6/183 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              L I +  +L  G +                    LP     T    L AMV++    
Sbjct: 50  GAALAIILWFMLARGWRAINWEFLTTAPYDSMTKGGILPCIVG-TLCLGLGAMVVAFPIG 108

Query: 84  FVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
              A    +  R G VL  I   ++ +  +P + F  F + +F+      V     A   
Sbjct: 109 VASAIYLNEYARPGKVLRIIRLGINNLAGVPSVVFGLFGLAFFVIYLEMGVSLLAGALTL 168

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           A  +  V  +  +  ++L ++P    E S     + WQ  + + +P +MPG++   ++ +
Sbjct: 169 AAMSLPV--IIGASEEALKSVPDTYREASLGLGATKWQTIYRVVLPAAMPGILTGGILGL 226

Query: 201 SGG 203
           S  
Sbjct: 227 SRA 229



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 10/188 (5%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R + +++     ++    +   W++I +        D +    +    +  + + +  A 
Sbjct: 43  RAAALVNGAALAIILWFMLARGWRAINWEFLTTAPYDSMTKGGILPCIVGTLCLGLG-AM 101

Query: 399 IIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNL 450
           ++  P+G+              +   I+     LA  P+ VF    ++    Y  +  +L
Sbjct: 102 VVAFPIGVASAIYLNEYARPGKVLRIIRLGINNLAGVPSVVFGLFGLAFFVIYLEMGVSL 161

Query: 451 WLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               L +      ++         + P+ ++E +     T W+    ++LP   P  +TG
Sbjct: 162 LAGALTLAAMSLPVIIGASEEALKSVPDTYREASLGLGATKWQTIYRVVLPAAMPGILTG 221

Query: 510 AITACGGA 517
            I     A
Sbjct: 222 GILGLSRA 229


>gi|116695766|ref|YP_841342.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530265|emb|CAJ96612.1| ABC-type transporter, duplicated permease domains [Ralstonia
           eutropha H16]
          Length = 589

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 79/537 (14%), Positives = 166/537 (30%), Gaps = 58/537 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T    L   ++S++  +  A L +   K R+   +   +L    S  +  F    ++
Sbjct: 67  MLITLKISLWTTLLSVVAGYPVAYLISSLSKDRKAKWLFWVLLSFWTSFLVRAFAWIVML 126

Query: 122 ------------YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                         +   P  ++ +  A + A+  + +     +M   + NI R+L   +
Sbjct: 127 GRNGVVNQLLSAAGIQDAPSNLLYSLGAVLVAMVHALMPLAVLTMLSVMENIDRNLPRAA 186

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +        FW +  P SMPG+    +M       F +   ++     ++    I   +
Sbjct: 187 LTLGARPGTAFWRVYFPLSMPGVAAGAIMVFVTAVGFFIVPALLGGRKEIMVAQLIIDQV 246

Query: 230 ALAIKEQDLLAI-LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288
              +      +I +  +L +L V  LYD++L                       S     
Sbjct: 247 QQTMNWGFAGSISVLLLLVVLAVFALYDKVL--------------------GLSSMAGGA 286

Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348
            ++T                +   +  +   L  +            S    + +L +  
Sbjct: 287 EQRTRSAAAHDGVLHRLGDSVLGALGAVSDKLLALVPRGRREPQPGDSLPLRTIVLMVLL 346

Query: 349 FCVVCGVAI---------GIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIII 396
           F  V  + +         G+ W   G+ + H  YQD+L        G  ++   +   ++
Sbjct: 347 FLSVPALLMIPLSFADKSGLNWPPRGFTLQH--YQDMLASPLWMQAGLRSLLVGLGAAVL 404

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           A ++  PV   +         +   A +L+          V     +  +        LM
Sbjct: 405 ALLVGTPVAFLLARSQMRGKSLL-LAFVLSPIIIPRMIIAVGMFYFFARVGLVGTSLGLM 463

Query: 457 I---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           I        Y++  ++A    +       A S     W+  RY+ LP +     +  + A
Sbjct: 464 IGHTVIAVPYVVMTMMAVLRNYDTRLDLAAQSLGARPWQTLRYVTLPILAAGLFSSFLFA 523

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              +++   ++  AS G        L     +       P +      +  FV  L 
Sbjct: 524 FATSFDELTIALFASGGLSAT----LPKQFWDEVTLQLSPVIAAVSTCLFVFVTLLI 576



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 2/154 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           Q   R+ L  L A V++LL     A L A+S+  G  L+    ++  I I+  +   V  
Sbjct: 389 QAGLRSLLVGLGAAVLALLVGTPVAFLLARSQMRGKSLLLAF-VLSPI-IIPRMIIAVGM 446

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F       ++G  L  +       V  +  +M   L N    L+  ++S     WQ   Y
Sbjct: 447 FYFFARVGLVGTSLGLMIGHTVIAVPYVVMTMMAVLRNYDTRLDLAAQSLGARPWQTLRY 506

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +P    GL  + + + +  +  +  +     G
Sbjct: 507 VTLPILAAGLFSSFLFAFATSFDELTIALFASGG 540


>gi|51245734|ref|YP_065618.1| phosphate ABC transporter, permease protein (PstA) [Desulfotalea
           psychrophila LSv54]
 gi|50876771|emb|CAG36611.1| probable phosphate ABC transporter, permease protein (PstA)
           [Desulfotalea psychrophila LSv54]
          Length = 420

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 67/171 (39%), Gaps = 4/171 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  +   A  +   +L  + +S       A      A S R   ++   ++ + ++P +
Sbjct: 194 ELAGILGAACGSFYTLLITLCLSFPIGVATAIYLEEFAPSNRWTDLIEVNINNLAAVPSI 253

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N++ G      L     +    +  +  +   SL ++P  + E +    
Sbjct: 254 IFGLLGLAVFINIW-GIPRSTPLVGGLVLSLMTLPTIIIASRASLKSVPPSIREAALGVG 312

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            S  Q   +  +P +MPG++   ++ M+          MI +   ++ +PG
Sbjct: 313 ASKMQTITHHVLPLAMPGMLTGTIIGMAQALGETAPLLMIGMIAFIVDIPG 363



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 6/209 (2%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           +N+RV+     +   +V    I + + +  +        ++  ++   C + + +++ + 
Sbjct: 155 ANRRVNDQQLAWIDSLVANNKIEMVFNTTFFTAGDSREPELAGILGAACGSFYTLLITLC 214

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN--- 449
           ++  I +   I++         +  I+     LAA P+ +F  L ++        P    
Sbjct: 215 LSFPIGVATAIYLEEFAPSNRWTDLIEVNINNLAAVPSIIFGLLGLAVFINIWGIPRSTP 274

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   + P   +E A     +  +   + +LP   P  +TG
Sbjct: 275 LVGGLVLSLMTLPTIIIASRASLKSVPPSIREAALGVGASKMQTITHHVLPLAMPGMLTG 334

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTG 538
            I     A   +    +       +   G
Sbjct: 335 TIIGMAQALGETAPLLMIGMIAFIVDIPG 363


>gi|261213082|ref|ZP_05927366.1| phosphate transport system permease protein PstC [Vibrio sp. RC341]
 gi|260838147|gb|EEX64824.1| phosphate transport system permease protein PstC [Vibrio sp. RC341]
          Length = 306

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L    LP  A      
Sbjct: 28  KERIFHGLFLTSAVIGIVSLGIIAYFIVRESIPAFQEAGVTGIVLGQDWLPP-ALYGVAT 86

Query: 72  MLSAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A V+S    ++       L A        +R+  V+ P ++++  IP + +    L 
Sbjct: 87  MIVASVVSTFGAVIVGVPVGVLTAVFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLV 146

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 147 IIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSI 206

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 207 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    V+    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 74  QDWLPPALYGVATMIVASVVSTFGAVIVGVPVGVLTAVFIAEVAPKRVADVIRPAVELLA 133

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 134 GIPSVVYGFFGLVIIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 193

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 194 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 253

Query: 539 L 539
           L
Sbjct: 254 L 254


>gi|55821036|ref|YP_139478.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737021|gb|AAV60663.1| phosphate ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
          Length = 300

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 89/228 (39%), Gaps = 9/228 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-- 58
           M    I+      +I  +   ++A ++V  +  ++L+ +           +  ++     
Sbjct: 1   MREREIMNAKKVDKIAISTLYVIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKA 60

Query: 59  -HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILG 114
              +      +   ++  ++IS+  +          AK  RL   +   ++I+ S+P + 
Sbjct: 61  GGGIGVQLYNSLFLLVITLIISVPLSMGTGIFLSEYAKKGRLSNFVRTCIEILSSLPSVV 120

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              F  + F+  +         A    +F   +  MT ++  SL  +     E   +  L
Sbjct: 121 VGLFGYLIFVVQFQYGFSILSGALALTVFN--LPQMTRTVEDSLRTVHHTQREAGLALGL 178

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           S W+   ++ +P ++PG+V  +++S SG  F   A+ +   G +   L
Sbjct: 179 SRWETICHVVIPEALPGIVTGIVLS-SGRIFGEAAALIYTAGQSAPAL 225



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 79/213 (37%), Gaps = 28/213 (13%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------ 383
              ++ + ++V  +     + +   +   +A   +  +V    +    ++  +       
Sbjct: 2   REREIMNAKKVDKIAISTLYVIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKAG 61

Query: 384 ---CITMFRVVVLIIIASIIWIPV----GIWIGFRP---HISSKIQPFAQLLAAFPANVF 433
               + ++  + L++I  II +P+    GI++        +S+ ++   ++L++ P+   
Sbjct: 62  GGIGVQLYNSLFLLVITLIISVPLSMGTGIFLSEYAKKGRLSNFVRTCIEILSSLPS--- 118

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSF 486
             +VV    Y            ++ G     +FN+        +  +       E   + 
Sbjct: 119 --VVVGLFGYLIFVVQFQYGFSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLAL 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            ++ W    ++++P   P  VTG + + G  + 
Sbjct: 177 GLSRWETICHVVIPEALPGIVTGIVLSSGRIFG 209


>gi|47567832|ref|ZP_00238540.1| phosphate transport system permease protein pstA [Bacillus cereus
           G9241]
 gi|47555509|gb|EAL13852.1| phosphate transport system permease protein pstA [Bacillus cereus
           G9241]
          Length = 288

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  R++  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRVYKTLFYIAILFSIVILLVLLFQIFEKGISYLSLEFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPSSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYRIVLPYAFPGIITGCTLAISRA 214



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P+   
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPSSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 214


>gi|325291855|ref|YP_004277719.1| phosphate ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
 gi|325059708|gb|ADY63399.1| phosphate ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
          Length = 440

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  +V+SL      +      A   RL  ++   ++ + ++P + +    +  F+
Sbjct: 225 SFYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLSVFI 284

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  
Sbjct: 285 N-FMGFPRSASLVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQTIFHHV 343

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 344 LPLAMPGILTGTIIGLAHA 362



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
           F    +     +N+R+S     +   +V    +G  + +  ++    +  +   V     
Sbjct: 164 FKGQVDMSGDEANRRISNQQLGWMNQLVESGQLGKHFNTGIFVNGASSRPEAAGVGVALI 223

Query: 385 ITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
            + + ++++++++  I +   I++     +  ++  I+     LAA P+ V+  L +S  
Sbjct: 224 GSFYMMLIVLVLSLPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLSVF 283

Query: 442 SYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +   P   +L   L++   T   I+    A   A P   +  A     +  +   + +
Sbjct: 284 INFMGFPRSASLVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQTIFHHV 343

Query: 499 LPGIFPYYVTGAITACGGA 517
           LP   P  +TG I     A
Sbjct: 344 LPLAMPGILTGTIIGLAHA 362


>gi|87121061|ref|ZP_01076952.1| membrane protein component of ABC phosphate transporter
           [Marinomonas sp. MED121]
 gi|86163553|gb|EAQ64827.1| membrane protein component of ABC phosphate transporter
           [Marinomonas sp. MED121]
          Length = 572

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +L   ++   F  V A      A    L  ++   ++ +  +P + +  F + +F+
Sbjct: 327 TIMMVLLMTILVTPFGVVAAVYLREYASQGWLTRIIRIAVNNLAGVPSIVYGVFGLGFFI 386

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 +                G  + A   +    V  +  +  + L  IPR++ E S
Sbjct: 387 YFMGSSIDQAFFPEALPSPTFGTGGLMWASITLALLTVPVVIVATEEGLSRIPRNVREGS 446

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   +  +  W + +P + P ++  ++++++  
Sbjct: 447 LALGATKAETLWRVVLPMASPAIMTGVILAVARA 480



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
            FFP  +     +     +W S+ +   T   ++     G S  P + +E + +   T  
Sbjct: 396 AFFPEALPS-PTFGTGGLMWASITLALLTVPVVIVATEEGLSRIPRNVREGSLALGATKA 454

Query: 492 RWWRYIILPGIFPYYVTGAITACGGA 517
                ++LP   P  +TG I A   A
Sbjct: 455 ETLWRVVLPMASPAIMTGVILAVARA 480


>gi|120555200|ref|YP_959551.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
 gi|120325049|gb|ABM19364.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
          Length = 274

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 48  IVDIVPITLDVHSLPQYASRTTLRM-LSAMVISLLFTFVYATLAAKS----RRLGMVLVP 102
           + ++ P   D       A   T +M L   VI ++ +   A LAA++      +  V   
Sbjct: 61  VGEMFPPATDRAQPIFEAILVTFQMALVGTVIGVILSVPMALLAARNTSPHPLVRYVTRS 120

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I+  ++++P L +  F VV               A    I    +        ++   + 
Sbjct: 121 IISFVRTVPDLAWALFFVVSVGLG--------PFAGTLTIIVDTIGFCGRFFAEAFEEVD 172

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E   S       +   + +P ++P ++   + S+       V   ++  G      
Sbjct: 173 PGPSEALDSIGSRPLDRIAVVQIPGALPSMINTGLFSLEKAARSSVVLGLVGAG------ 226

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            GIG+ +A++++        + + ++  +++L +    R
Sbjct: 227 -GIGAELAVSMEMFRYDQAAFIIFSIFILVYLVEHFSSR 264



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 76/265 (28%), Gaps = 20/265 (7%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
               +   RF  P           + + L       +   ++     ++G IV       
Sbjct: 9   PASPVLRGRFQRPSWLSSGLFALFLGFFLWSLAGAGMSLQSLIQGLPNMGTIVGEMFPPA 68

Query: 376 ---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAF 428
                 +     +T    +V  +I  I+ +P+ +         P +    +     +   
Sbjct: 69  TDRAQPIFEAILVTFQMALVGTVIGVILSVPMALLAARNTSPHPLVRYVTRSIISFVRTV 128

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           P   +    V  V        L + +  I F  +++                 E   S  
Sbjct: 129 PDLAWALFFVVSVGLGPFAGTLTIIVDTIGFCGRFF-----AEAFEEVDPGPSEALDSIG 183

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
                    + +PG  P  +   + +   A  +S+V  +   G       G+GA +A S 
Sbjct: 184 SRPLDRIAVVQIPGALPSMINTGLFSLEKAARSSVVLGLVGAG-------GIGAELAVSM 236

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572
           E   + +    +  +   V  +  F
Sbjct: 237 EMFRYDQAAFIIFSIFILVYLVEHF 261


>gi|297559379|ref|YP_003678353.1| binding-protein-dependent transporters inner membrane component
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296843827|gb|ADH65847.1| binding-protein-dependent transport systems inner membrane
           component [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 225

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 47/158 (29%), Gaps = 11/158 (6%)

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            +P+G+  G            A    A P      L+V       +     L  L     
Sbjct: 45  AVPLGLLTGHTGVGGFLTTSLANFARALPTIGVLFLIVLAAGIGIVPVLCALVAL----A 100

Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              IL N   G        ++ A    + G +    + LP   P  + G  TA       
Sbjct: 101 VPPILVNTHEGVRGVEPRLRDAAVGMGMRGHQVLLRLELPVATPLILIGMRTAAVQVVAT 160

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           + ++     G       GLG YI +   +     ++ G
Sbjct: 161 ATIAAYVGVG-------GLGRYIVDGQARQDLTMMLGG 191



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 15/184 (8%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +P          L  +++S         L   +   G +   + +  +++P +G    
Sbjct: 21  AGIPARLGEHVYYSLLGLLLSAAVAVPLGLLTGHTGVGGFLTTSLANFARALPTIG---- 76

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V++ + L  G  I   L A+ A+    V  +  + ++ +  +   L + +    + G Q
Sbjct: 77  -VLFLIVLAAGIGIVPVLCALVAL---AVPPILVNTHEGVRGVEPRLRDAAVGMGMRGHQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               L +P + P ++  M  +          +  + VG       G+G YI      QDL
Sbjct: 133 VLLRLELPVATPLILIGMRTAAVQVVATATIAAYVGVG-------GLGRYIVDGQARQDL 185

Query: 239 LAIL 242
             +L
Sbjct: 186 TMML 189


>gi|160880963|ref|YP_001559931.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           phytofermentans ISDg]
 gi|160429629|gb|ABX43192.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           phytofermentans ISDg]
          Length = 294

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 77/209 (36%), Gaps = 7/209 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +A  L +GI+  +     ++     +            +      T   ++  +++    
Sbjct: 29  IAIALFVGIVAYVFFRGIKSVNWEFLTTAPSAIKGTFGIAGNIINTLYIVILTLLLVTPI 88

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      AK  ++  ++    + +  IP + F  F +V+F          + L   
Sbjct: 89  GIGAAIYLNEYAKPGKVVRLIEFTTETLSGIPSIIFGLFGMVFFGTTLGLSY--SLLTGA 146

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P+   + +     + W     + +P +MPG++  ++++
Sbjct: 147 LTLSLMVLPLITRNTQEALKTVPKSYRDGALGMGSTKWHMIRTILLPSAMPGIITGIILA 206

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
              G     ++ ++    +   LP +G Y
Sbjct: 207 --TGRIVGESAALLFTAGSGYLLPKLGEY 233



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 10/205 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIIIASI 399
            + I  F  +         +S+ +         +     +      T++ V++ +++ + 
Sbjct: 28  GIAIALFVGIVAYVFFRGIKSVNWEFLTTAPSAIKGTFGIAGNIINTLYIVILTLLLVTP 87

Query: 400 IWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLS 453
           I I   I++        +   I+   + L+  P+ + F L         L  +   L  +
Sbjct: 88  IGIGAAIYLNEYAKPGKVVRLIEFTTETLSGIPSII-FGLFGMVFFGTTLGLSYSLLTGA 146

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       I  N        P  +++ A     T W   R I+LP   P  +TG I A
Sbjct: 147 LTLSLMVLPLITRNTQEALKTVPKSYRDGALGMGSTKWHMIRTILLPSAMPGIITGIILA 206

Query: 514 CGGAWNASIVSEVASWGHIHLRTTG 538
            G     S      +     L   G
Sbjct: 207 TGRIVGESAALLFTAGSGYLLPKLG 231


>gi|307327043|ref|ZP_07606233.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
 gi|306887341|gb|EFN18337.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces violaceusniger Tu 4113]
          Length = 227

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L           L+++ I LL     A LA + + +   ++ +  I+ ++P L   + 
Sbjct: 23  QELTDATLEHVWITLASVAIGLLVALPLALLARRWKVVSGPVLGLTTILYTVPSLAMFSL 82

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F               I  +    +  +  ++   L ++P +  E +R       +
Sbjct: 83  LLPVFGVSV--------AVVITGLVLYSLTILVRNIMAGLASVPEEAREAARGMGYGPLR 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P ++P ++  + ++            +I  G       G+G+ I   ++    
Sbjct: 135 LLFGVELPLALPAVMAGLRITTVSTVSLTTVGAIIGYG-------GLGNLIYEGMRSFFK 187

Query: 239 LAILYAML 246
             +L A +
Sbjct: 188 AEVLTASV 195



 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 11/122 (9%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +L   P+   F L++             L L  +      ++ N++AG ++ P + +E A
Sbjct: 70  ILYTVPSLAMFSLLLPVFGVSVAVVITGLVLYSLTI----LVRNIMAGLASVPEEAREAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   R    + LP   P  + G         + + V  +  +G       GLG  I
Sbjct: 126 RGMGYGPLRLLFGVELPLALPAVMAGLRITTVSTVSLTTVGAIIGYG-------GLGNLI 178

Query: 544 AE 545
            E
Sbjct: 179 YE 180


>gi|283458827|ref|YP_003363469.1| proline/glycine betaine ABC transporter permease [Rothia
           mucilaginosa DY-18]
 gi|283134884|dbj|BAI65649.1| ABC-type proline/glycine betaine transport system, permease
           component [Rothia mucilaginosa DY-18]
          Length = 221

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 67/185 (36%), Gaps = 22/185 (11%)

Query: 82  FTFVYATLAAK-------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
                   A         +RR   +L+  +   +++P LG LT   ++           +
Sbjct: 33  IVVPLGLWAGHHRPSDGTNRRRSNLLMSAVAATRALPALGLLTILALWLGV--------S 84

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L A+  +       +   + + L  +P DL + +R+  L+ WQ    L +P +   ++ 
Sbjct: 85  TLPALIVLIIIAAAPLLAGVLEGLAAVPEDLVDAARAQGLTEWQILTRLEIPLAANMMLG 144

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +  ++            +  G        +G Y+   +  +D   +L A L +  + F 
Sbjct: 145 GLRSALVQVIATATIVAYLSGGT-------LGRYLFDGLAVRDYPRMLVATLLVALLAFA 197

Query: 255 YDQLL 259
            D L+
Sbjct: 198 VDALM 202



 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-------FRPHISSKIQPFAQLL 425
           +Q    ++      +    +    A++I +P+G+W G            S+ +       
Sbjct: 6   WQGSGGILVRLLEHLSVTALATACAALIVVPLGLWAGHHRPSDGTNRRRSNLLMSAVAAT 65

Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A PA     ++   +    L       +++I      +L  V+ G +A P D  + A +
Sbjct: 66  RALPALGLLTILALWLGVSTL----PALIVLIIIAAAPLLAGVLEGLAAVPEDLVDAARA 121

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             +T W+    + +P      + G  +A       + +    S G        LG Y+ +
Sbjct: 122 QGLTEWQILTRLEIPLAANMMLGGLRSALVQVIATATIVAYLSGGT-------LGRYLFD 174

Query: 546 STEKGSFPEV 555
                 +P +
Sbjct: 175 GLAVRDYPRM 184


>gi|255263961|ref|ZP_05343303.1| phosphate ABC transporter, permease protein PstA [Thalassiobium sp.
           R2A62]
 gi|255106296|gb|EET48970.1| phosphate ABC transporter, permease protein PstA [Thalassiobium sp.
           R2A62]
          Length = 441

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 53/138 (38%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  M++ L         A       A +  +  ++   +  + ++P + +    +  F+N
Sbjct: 223 LYMMIVVLALALPLGVAASIYLEEFAPNNWITDLIEVNISNLAAVPSIVYGILGLAIFIN 282

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    A L     +    +  +  S   +L ++P  + + +     S  Q  ++  +
Sbjct: 283 -FAGLPQSAPLVGGLVLTLMTLPTIIISTRAALKSVPPSIRDAALGVGASKMQSVFHHVL 341

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P + PG++   ++ ++  
Sbjct: 342 PLAAPGILTGTIIGLAQA 359



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + ++I+   + +P+G+              I+  I+     LAA P+ V+  L
Sbjct: 216 GVAILGSLYMMIVVLALALPLGVAASIYLEEFAPNNWITDLIEVNISNLAAVPSIVYGIL 275

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L   L++   T   I+ +  A   + P   ++ A     +  + 
Sbjct: 276 GLAIFINFAGLPQSAPLVGGLVLTLMTLPTIIISTRAALKSVPPSIRDAALGVGASKMQS 335

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 336 VFHHVLPLAAPGILTGTIIGLAQA 359


>gi|269795711|ref|YP_003315166.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Sanguibacter keddieii DSM 10542]
 gi|269097896|gb|ACZ22332.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 302

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 86/242 (35%), Gaps = 20/242 (8%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIW-----LGCITMFRVVVLIIIASIIWIPVGIWI 408
           G+A+   W  +  + +  +      V+W      G +++   VV  ++   + + + + +
Sbjct: 59  GLAMPHTWDMVARLFDPVSGARDAPVLWRAVLDAGAVSLGIAVVGWLVGVTVGVLLALAM 118

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWY 463
                +   + P   L    P     PLV S      +  +   P + ++++  +   + 
Sbjct: 119 QRLRVVERAVLPLVVLSQTVPLIALAPLVRSWGAKLQIGGFEWEPWMSVAVIASYLAFFP 178

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           +   ++ G  +      E+ +++    +     + LP   P+ +     A   A   ++V
Sbjct: 179 VAVGMLRGLQSPDTIHVELMTAYAAGWFATLVRLRLPAAVPHLLPALRLAAANAVIGTVV 238

Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMCCFVLALNRFLWHPLY 578
           +EVA+         G+G  I E     S         + G +++      L   L   L 
Sbjct: 239 AEVATG-----LPGGIGRMILEFANFASSDPAKPWAPIFGAVVLGLVAAGLVTLLGRSLG 293

Query: 579 LY 580
            +
Sbjct: 294 RF 295



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 11/215 (5%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
             ++    + +    +   ++ +    + A    + R +   ++P++ + Q++P++    
Sbjct: 86  WRAVLDAGAVSLGIAVVGWLVGVTVGVLLALAMQRLRVVERAVLPLVVLSQTVPLIALAP 145

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +   L  G        ++  I      + +   M + L +      E+  ++    
Sbjct: 146 LVRSWGAKLQIGGFEWEPWMSVAVIASYLAFFPVAVGMLRGLQSPDTIHVELMTAYAAGW 205

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +     L +P ++P L+  + ++ +      V +E+           GIG  I       
Sbjct: 206 FATLVRLRLPAAVPHLLPALRLAAANAVIGTVVAEVATG-----LPGGIGRMILEFANFA 260

Query: 237 D-----LLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                   A ++  + +  V      LL R +  +
Sbjct: 261 SSDPAKPWAPIFGAVVLGLVAAGLVTLLGRSLGRF 295


>gi|309781028|ref|ZP_07675767.1| phosphonate ABC transporter, permease protein PhnE [Ralstonia sp.
           5_7_47FAA]
 gi|330824575|ref|YP_004387878.1| phosphonate ABC transporter inner membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|308920331|gb|EFP65989.1| phosphonate ABC transporter, permease protein PhnE [Ralstonia sp.
           5_7_47FAA]
 gi|329309947|gb|AEB84362.1| phosphonate ABC transporter, inner membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 265

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVV 121
             T    ++   I++L +     LAA++      +      +L+ ++SIP L      V 
Sbjct: 75  LDTLAMSIAGTAIAVLLSIPLGVLAARNTSPHPLVYQATRGLLNALRSIPELIMGILFVA 134

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
                    V+   L ++  I             +S+ +      E + +   +  Q  +
Sbjct: 135 AVGFGALPGVLALGLHSVGMIAKF--------FSESIEHADPAPVEAAHAAGCTPLQVIF 186

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           +   P  +P +    +      +       M+  G     L G        ++ QD+ AI
Sbjct: 187 HGIFPQVLPQMADTAIYRWEYNFRASTVMGMVGAGGIGFELMG----SLRIMQYQDVSAI 242

Query: 242 LYAMLTMLGVIFLYDQLLFRPM 263
           L  +L M+ ++  +   L R  
Sbjct: 243 LLVILGMVTLVDAFSSFLRRKF 264



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 19/193 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T+   +    IA ++ IP+G+         P +    +     L + P  +   L V+ V
Sbjct: 77  TLAMSIAGTAIAVLLSIPLGVLAARNTSPHPLVYQATRGLLNALRSIPELIMGILFVAAV 136

Query: 442 SYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +  L   L L L  + +    +                  E A +   T  +   + I 
Sbjct: 137 GFGALPGVLALGLHSVGMIAKFF------SESIEHADPAPVEAAHAAGCTPLQVIFHGIF 190

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P     AI      + AS V  +   G       G+G  +  S     + +V   +
Sbjct: 191 PQVLPQMADTAIYRWEYNFRASTVMGMVGAG-------GIGFELMGSLRIMQYQDVSAIL 243

Query: 560 LIMCCFVLALNRF 572
           L++   V  ++ F
Sbjct: 244 LVILGMVTLVDAF 256


>gi|254486512|ref|ZP_05099717.1| phosphate ABC transporter, permease protein PstA [Roseobacter sp.
           GAI101]
 gi|214043381|gb|EEB84019.1| phosphate ABC transporter, permease protein PstA [Roseobacter sp.
           GAI101]
          Length = 443

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 60/187 (32%), Gaps = 4/187 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
                  LV  +I       +         D      +   +      +   ML  + ++
Sbjct: 175 ISTAQLDLVDALIADGALEKRFNLAFITGADASDARPEAAGMGVSMLGSLFMMLVVLALA 234

Query: 80  LLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           L      +      A    +  ++   +  + ++P + F    +  F+N        A L
Sbjct: 235 LPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGILGLAVFINYM-HLPNSAPL 293

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
                +    +  +  S   SL ++P  + + +     S  Q  ++  +P + PG++   
Sbjct: 294 VGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQSVFHHVLPLAAPGILTGT 353

Query: 197 MMSMSGG 203
           ++ ++  
Sbjct: 354 IIGLAQA 360



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              I+  I+     LAA P+ VF  
Sbjct: 216 MGVSMLGSLFMMLVVLALALPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGI 275

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    Y   PN   L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 276 LGLAVFINYMHLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 335

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 336 SVFHHVLPLAAPGILTGTIIGLAQA 360


>gi|24429594|gb|AAN40984.2| putative ABC transporter [Bradyrhizobium japonicum]
          Length = 545

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 85/229 (37%), Gaps = 24/229 (10%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            ++  D      ++     L  +   +  R+   + ISL         A   RR    L+
Sbjct: 1   MSLFTDPRWGEAVSHLPDYLGNHVRVSPGRLALGLAISLPLAIPDTQTA---RRRAASLL 57

Query: 102 PILDIMQSIP-----------ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
            +  I+Q++P           +L   + T+ +F   +        L A+ A+    +  +
Sbjct: 58  ALASIVQTVPGLALLALFYPLLLAAASLTLAWFGISFSA---FGFLPAMLALALYSMLPV 114

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
             +    L  I   L E +    ++  Q    + +P ++P ++  +  +    W    A+
Sbjct: 115 VRNGITGLNGIDPALIEAAEGVGMTARQSLVLVELPLALPVMMAGIRTA--AVWVIGTAT 172

Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
               +G T      +G+YI   ++ Q+ + +L+  L    +    DQLL
Sbjct: 173 LSTPIGQTS-----LGNYIFAGLQTQNWVFVLFGCLASALLALAVDQLL 216



 Score = 37.6 bits (86), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 8/135 (5%)

Query: 440 CVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                        ++L +   +   ++ N I G +       E A    +T  +    + 
Sbjct: 89  WFGISFSAFGFLPAMLALALYSMLPVVRNGITGLNGIDPALIEAAEGVGMTARQSLVLVE 148

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  + G  TA    W     +     G        LG YI    +  ++  V+ G
Sbjct: 149 LPLALPVMMAGIRTAA--VWVIGTATLSTPIGQTS-----LGNYIFAGLQTQNWVFVLFG 201

Query: 559 VLIMCCFVLALNRFL 573
            L      LA+++ L
Sbjct: 202 CLASALLALAVDQLL 216


>gi|323495324|ref|ZP_08100402.1| ABC transporter, permease protein [Vibrio brasiliensis LMG 20546]
 gi|323310395|gb|EGA63581.1| ABC transporter, permease protein [Vibrio brasiliensis LMG 20546]
          Length = 225

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           + L+ + L      T   +  A ++          +   S++        L  VL  I++
Sbjct: 10  LNLNSNLLIGATLETLYMVAVAGIVGFAVGIPLGVILHTSKKGGLLENTKLNSVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  VGRSVPFLVLM-VAIIPVTKLLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P +MP +V ++ +++
Sbjct: 128 VEAAQSMGATPMQIISKVLLPEAMPTIVNSVTITL 162



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 22/202 (10%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPA 430
           +I     T++ V V  I+   + IP+G+ +             ++S +     +  + P 
Sbjct: 17  LIGATLETLYMVAVAGIVGFAVGIPLGVILHTSKKGGLLENTKLNSVLGAIVNVGRSVPF 76

Query: 431 NVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            V      P+    V  +       + L +  G   ++   +       P    E A S 
Sbjct: 77  LVLMVAIIPVTKLLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALLEVPTGLVEAAQSM 134

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T  +    ++LP   P  V           + S ++     G +       G +    
Sbjct: 135 GATPMQIISKVLLPEAMPTIVNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH---- 190

Query: 547 TEKGSFPEVVLGVLIMCCFVLA 568
                +  V++ V ++   VL 
Sbjct: 191 ----RYDVVIMAVTVVMLIVLV 208


>gi|261417676|ref|YP_003251358.1| phosphate ABC transporter inner membrane subunit PstC [Geobacillus
           sp. Y412MC61]
 gi|297529371|ref|YP_003670646.1| phosphate ABC transporter inner membrane protein [Geobacillus sp.
           C56-T3]
 gi|319767518|ref|YP_004133019.1| phosphate ABC transporter inner membrane protein PstC [Geobacillus
           sp. Y412MC52]
 gi|261374133|gb|ACX76876.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           sp. Y412MC61]
 gi|297252623|gb|ADI26069.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           sp. C56-T3]
 gi|317112384|gb|ADU94876.1| phosphate ABC transporter, inner membrane subunit PstC [Geobacillus
           sp. Y412MC52]
          Length = 298

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 5/155 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + L  L A++IS       A        +    +L P+L+++  IP + +    V   + 
Sbjct: 82  SMLVSLGALLISAPIALALAIFMNFIAPKWFVSLLKPVLELLVGIPSVVYGWLGVTILVP 141

Query: 126 LYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L     G    + LA I  +    +  +T     +L N+P    E S     + WQ    
Sbjct: 142 LLREWFGGSGFSLLAGIIVLSMMILPTITSIAADALANVPMTYMEASYGLGSTRWQAISR 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + VP +  G+   +++ ++  +   +A +M++   
Sbjct: 202 VIVPAAKAGIATGVVLGLARAFGEALAVQMVIGNT 236



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 67/175 (38%), Gaps = 9/175 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               Y  +++++    +++  +++   IA  + I +           S ++P  +LL   
Sbjct: 69  TPPKYGALIFIVGSMLVSLGALLISAPIALALAIFMNFI--APKWFVSLLKPVLELLVGI 126

Query: 429 PANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKE 481
           P+ V+  L V+ +       +     +L   ++++       + ++ A   +  P  + E
Sbjct: 127 PSVVYGWLGVTILVPLLREWFGGSGFSLLAGIIVLSMMILPTITSIAADALANVPMTYME 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +     T W+    +I+P       TG +     A+  ++  ++     I L +
Sbjct: 187 ASYGLGSTRWQAISRVIVPAAKAGIATGVVLGLARAFGEALAVQMVIGNTIKLPS 241


>gi|56420997|ref|YP_148315.1| phosphate ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56380839|dbj|BAD76747.1| phosphate ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 298

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 5/155 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           + L  L A++IS       A        +    +L P+L+++  IP + +    V   + 
Sbjct: 82  SMLVSLGALLISAPIALALAIFMNFIAPKWFVSLLKPVLELLVGIPSVVYGWLGVTILVP 141

Query: 126 LYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           L     G    + LA I  +    +  +T     +L N+P    E S     + WQ    
Sbjct: 142 LLREWFGGSGFSLLAGIIVLSMMILPTITSIAADALANVPMTYMEASYGLGSTRWQAISR 201

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + VP +  G+   +++ ++  +   +A +M++   
Sbjct: 202 VIVPAAKAGIATGVVLGLARAFGEALAVQMVIGNT 236



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 67/175 (38%), Gaps = 9/175 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               Y  +++++    +++  +++   IA  + I +           S ++P  +LL   
Sbjct: 69  TPPKYGALIFIVGSMLVSLGALLISAPIALALAIFMNFI--APKWFVSLLKPVLELLVGI 126

Query: 429 PANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKE 481
           P+ V+  L V+ +       +     +L   ++++       + ++ A   +  P  + E
Sbjct: 127 PSVVYGWLGVTILVPLLREWFGGSGFSLLAGIIVLSMMILPTITSIAADALANVPMTYME 186

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            +     T W+    +I+P       TG +     A+  ++  ++     I L +
Sbjct: 187 ASYGLGSTRWQAISRVIVPAAKAGIATGVVLGLARAFGEALAVQMVIGNTIKLPS 241


>gi|23336063|ref|ZP_00121292.1| COG0395: ABC-type sugar transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438933|ref|YP_001954014.1| sugar ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|227546787|ref|ZP_03976836.1| sugar ABC superfamily ATP binding cassette transporter, permease
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|312132373|ref|YP_003999712.1| abc-type sugar transport system permease component [Bifidobacterium
           longum subsp. longum BBMN68]
 gi|189427368|gb|ACD97516.1| ABC-type sugar transport system permease component [Bifidobacterium
           longum DJO10A]
 gi|227212749|gb|EEI80630.1| sugar ABC superfamily ATP binding cassette transporter, permease
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291516185|emb|CBK69801.1| carbohydrate ABC transporter membrane protein 2, CUT1 family (TC
           3.A.1.1.-) [Bifidobacterium longum subsp. longum F8]
 gi|311772469|gb|ADQ01957.1| Abc-type sugar transport system permease component [Bifidobacterium
           longum subsp. longum BBMN68]
          Length = 271

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 4/152 (2%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  ++V+S++  F   T     R  G   + +  +   +   G +   ++Y       K 
Sbjct: 74  MHLSIVLSIIVAFFACTALTLYRFRGRKPIMVFVLAIQMTSGGIIPQIIIYNQLGLLNKY 133

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G  LA I  +    +WNM         NIP+D+ E +     + WQ  W +  P + PG
Sbjct: 134 SGLILAYIAMVLPFAIWNM----RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPG 189

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +V   + +    W   + +   +   +   LP
Sbjct: 190 IVSTSVFAFINAWNDYMIAYTFMKDQSKYTLP 221



 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 70/264 (26%), Gaps = 13/264 (4%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                      +R    +    FCVV    +   W  I  +      
Sbjct: 7   PRAVSHGAAQSAPPRRRTNPGKIARRAGTTILALLFCVVWFFPVY--WMIITAVKPRDEI 64

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV- 432
                V W   ++       I+++ I+       +        K  P    + A      
Sbjct: 65  MTTTPVFWPMHLS-------IVLSIIVAFFACTALTLYRFRGRK--PIMVFVLAIQMTSG 115

Query: 433 -FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P ++       LN    L L  I     + ++N+       P D  E A+      W
Sbjct: 116 GIIPQIIIYNQLGLLNKYSGLILAYIAMVLPFAIWNMRGFFLNIPKDIFESAAVEGANDW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +    I  P   P  V+ ++ A   AWN  +++                +  +  T    
Sbjct: 176 QILWKITFPLAAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLPVWLSSFSTPTMGTD 235

Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575
           F   +   +     V+     +  
Sbjct: 236 FGGQMAASVTFSLPVVVFFMLIQR 259


>gi|323968047|gb|EGB63457.1| inner membrane transport system [Escherichia coli M863]
 gi|323977683|gb|EGB72769.1| inner membrane transport system [Escherichia coli TW10509]
 gi|327253255|gb|EGE64909.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli STEC_7v]
          Length = 243

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       S  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFSALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIIV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDVSVTEVAKGMGMSRGQQLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +  + LG  I       +   V+ G L++    +  +R     +
Sbjct: 183 IGTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++       +  +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIIVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDVSVTEVAKGMGMSRGQQLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +   S 
Sbjct: 215 QGALLVALAAIIADRLFERLVQALSQ 240


>gi|163746357|ref|ZP_02153715.1| Phosphate transport system permease protein 2 [Oceanibulbus
           indolifex HEL-45]
 gi|161380242|gb|EDQ04653.1| Phosphate transport system permease protein 2 [Oceanibulbus
           indolifex HEL-45]
          Length = 451

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 51/138 (36%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
            + M++ L+        A       A    +  ++   +  + ++P + F    +  F+N
Sbjct: 232 FAMMLVVLVLALPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGILGLAVFIN 291

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   A L     +    +  +  S   SL ++P  + + +     S  Q  ++  +
Sbjct: 292 YM-HLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQSVFHHVL 350

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P + PG++   ++ ++  
Sbjct: 351 PLAAPGILTGTIIGLAQA 368



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 29/226 (12%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             + M     ++++  ++ +P+G+              I+  I+     LAA P+ VF  
Sbjct: 224 MGVAMIGSFAMMLVVLVLALPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGI 283

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    Y   PN   L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 284 LGLAVFINYMHLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 343

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN------ASIVSEVASWGHIHLRTTGLG------ 540
              + +LP   P  +TG I     A           +    +         GL       
Sbjct: 344 SVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNPPESIAEGLMSPNSAM 403

Query: 541 -AYIAESTEKGS---FPEVVLGVLIMCCFVLALN---RFLWHPLYL 579
            A I E  ++     +     G++I+  F++++N     L      
Sbjct: 404 PAQIYEWAKRADPAFYERAWGGIIILLVFLISMNAIAVLLRRRFER 449


>gi|325283893|ref|YP_004256434.1| phosphate ABC transporter, inner membrane subunit PstA [Deinococcus
           proteolyticus MRP]
 gi|324315702|gb|ADY26817.1| phosphate ABC transporter, inner membrane subunit PstA [Deinococcus
           proteolyticus MRP]
          Length = 295

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 65/181 (35%), Gaps = 6/181 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   L++    +L  G+Q  +         P+      L      +   +  A VI +L 
Sbjct: 40  VVAPLLLIFYYLLTTGLQALSPEFFTQTPAPLGETGGGLKNAIIGSVTMLGMASVIGILV 99

Query: 83  TFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   ++  R  L   +  + D++  IP +          +  +    +   +A  F
Sbjct: 100 GVAGGIFLSEYPRHPLMPTVRMLSDVLAGIPAIVMGLVVYGLLVLQFGFSGLAGSIALGF 159

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    V     +  ++L  +PR   E   +  L  W+    + +P +  G+V  +M+++
Sbjct: 160 LMIPIVV----RTTEETLKLVPRATREAGLALGLPNWKVILQIVLPAAAGGIVTGIMLAL 215

Query: 201 S 201
           +
Sbjct: 216 A 216



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 14/242 (5%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
            S +  N     R +  +          +     +  +L +    ++    +    Q++ 
Sbjct: 1   MSAVQQNTAATRRAVPGLSPARKFTNSLMGGLIGLGTLLVVAPLLLIFYYLLTTGLQALS 60

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQ 419
                 T   +          +   V ++ +AS+I I VG+  G       R  +   ++
Sbjct: 61  PEFFTQTPAPLGETGGGLKNAIIGSVTMLGMASVIGILVGVAGGIFLSEYPRHPLMPTVR 120

Query: 420 PFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
             + +LA  PA V     + L+V    +  L  ++ L  LMI      ++          
Sbjct: 121 MLSDVLAGIPAIVMGLVVYGLLVLQFGFSGLAGSIALGFLMIPI----VVRTTEETLKLV 176

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P   +E   +  +  W+    I+LP      VTG + A       +      ++G+  + 
Sbjct: 177 PRATREAGLALGLPNWKVILQIVLPAAAGGIVTGIMLALARVAGEAAPLLFTAFGNNAVT 236

Query: 536 TT 537
           T 
Sbjct: 237 TN 238


>gi|317481652|ref|ZP_07940686.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916884|gb|EFV38272.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 271

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 4/159 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            +     M  ++V+S++  F         R  G   + +  +   +   G +   ++Y  
Sbjct: 67  TTPVFWLMHLSIVLSIIVAFFACAALTLYRFRGRKPIMVFVLAIQMTSGGIIPQIIIYNQ 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                K  G  LA I  +    +WNM         NIP+D+ E +     + WQ  W + 
Sbjct: 127 LGLLNKYSGLILAYIAMVLPFAIWNM----RGFFLNIPKDIFESAAVEGANDWQILWKIT 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            P + PG+V   + +    W   + +   +   +   LP
Sbjct: 183 FPLAAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLP 221



 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 75/268 (27%), Gaps = 18/268 (6%)

Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369
                   ++    R   P    +      ++ +  + WF  VC       W  I  +  
Sbjct: 8   RAVSHGAAQSAPPRRRTNPGKIARRAGTTILALLFCVVWFFPVC-------WMIITAVKP 60

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
                    V WL  ++       I+++ I+       +        K  P    + A  
Sbjct: 61  RDEIMTTTPVFWLMHLS-------IVLSIIVAFFACAALTLYRFRGRK--PIMVFVLAIQ 111

Query: 430 ANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
                  P ++       LN    L L  I     + ++N+       P D  E A+   
Sbjct: 112 MTSGGIIPQIIIYNQLGLLNKYSGLILAYIAMVLPFAIWNMRGFFLNIPKDIFESAAVEG 171

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              W+    I  P   P  V+ ++ A   AWN  +++                +  +  T
Sbjct: 172 ANDWQILWKITFPLAAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLPVWLSSFSTPT 231

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWH 575
               F   +   +     V+     +  
Sbjct: 232 MGTDFGGQMAASVTFSLPVVVFFMLIQR 259


>gi|299537691|ref|ZP_07050980.1| ABC transporter permease [Lysinibacillus fusiformis ZC1]
 gi|298726670|gb|EFI67256.1| ABC transporter permease [Lysinibacillus fusiformis ZC1]
          Length = 315

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+++    +   +A       S +    + PIL+++  +P + +    LTF       
Sbjct: 99  TLIAVVVAVPFGIASAIYLSEYASEKTRRTVKPILEVLAGVPTIVYGFFALTFVTPVLQE 158

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + PG  +   L+    +    +  +T     ++ ++P  + E + +   + ++    + +
Sbjct: 159 IVPGLKLFNALSPGIVVGIMILPMITSLSEDAMSSVPNSMREGALALGATKFEVAIKVVL 218

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++ G++ ++++++S  
Sbjct: 219 PAALSGIIASVVLAISRA 236



 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISS 416
             G     F+  + L+ I        +V    +IA ++ +P GI                
Sbjct: 71  LFGTKWLPFSGNEPLFGILPLIAGTLKV---TLIAVVVAVPFGIASAIYLSEYASEKTRR 127

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI------- 469
            ++P  ++LA  P  V+    ++ V+         L L         +   ++       
Sbjct: 128 TVKPILEVLAGVPTIVYGFFALTFVTPVLQEIVPGLKLFNALSPGIVVGIMILPMITSLS 187

Query: 470 -AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
               S+ PN  +E A +   T +     ++LP      +   + A   A
Sbjct: 188 EDAMSSVPNSMREGALALGATKFEVAIKVVLPAALSGIIASVVLAISRA 236


>gi|255693908|ref|ZP_05417583.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           finegoldii DSM 17565]
 gi|260620273|gb|EEX43144.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           finegoldii DSM 17565]
          Length = 291

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S++I   +F LL+  +V+ +  IL   I +                 +    +      T
Sbjct: 13  SQKIAFGLFRLLSLCIVLILFVILGFIIYKGIGAISWEFITSSPTDGMTGGGIWPAIVGT 72

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+ + + +     +        A   +L   +  + + +  IP + F  F +  F+N
Sbjct: 73  FYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVN 132

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + LA    +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +
Sbjct: 133 YMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVIL 190

Query: 186 PFSMPGLVWNMMMSMS 201
           P  MP ++  +++++ 
Sbjct: 191 PMGMPNIITGLILALG 206



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401
           ++ I +  +   +  GI   S  +I +  T       IW   + T + +V   + A  + 
Sbjct: 28  IVLILFVILGFIIYKGIGAISWEFITSSPTDGMTGGGIWPAIVGTFYLMVGSALFAFPVG 87

Query: 402 IPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        +   I+     L+  P+ VF  F + +        +  L  SL +
Sbjct: 88  VMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTL 147

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                  ++        A P+  +E + +   T  +   ++ILP   P  +TG I A G
Sbjct: 148 GLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILALG 206


>gi|167569894|ref|ZP_02362768.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 305

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 75/195 (38%), Gaps = 9/195 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A R    +  ++  ++           +S  L   L+P+L+++Q+IP +      +    
Sbjct: 98  AIRHLALVTGSVAAAVAAGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLA 157

Query: 125 NLYPGKVIGAE--------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A           A+ A+F   +  +  S+      +P  + E +++  ++G
Sbjct: 158 ILAARVPLAAAFGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAAQAMGMTG 217

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++   + +P ++P ++  + + +        VA+ +   G       GIG      +  
Sbjct: 218 RERLVAVELPLALPVVLSGVRIVLVQNIGLAAVAALIGGGGFGTFIFQGIGQSATDLVLL 277

Query: 236 QDLLAILYAMLTMLG 250
             L  I  A++T + 
Sbjct: 278 GALPTIALALVTAVL 292



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 13/192 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V   +  A    +P+GI       +   + P   ++   P+   + L+++ ++    
Sbjct: 102 LALVTGSVAAAVAAGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLAILAA 161

Query: 447 NPNLWLSL------------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
              L  +              +       I+ +V+ G +  P    E A +  +TG    
Sbjct: 162 RVPLAAAFGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAAQAMGMTGRERL 221

Query: 495 RYIILPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             + LP   P  ++G           A++ + +   G       G+G    +    G+ P
Sbjct: 222 VAVELPLALPVVLSGVRIVLVQNIGLAAVAALIGGGGFGTFIFQGIGQSATDLVLLGALP 281

Query: 554 EVVLGVLIMCCF 565
            + L ++    F
Sbjct: 282 TIALALVTAVLF 293


>gi|330468197|ref|YP_004405940.1| carbohydrate ABC transporter membrane protein [Verrucosispora maris
           AB-18-032]
 gi|328811168|gb|AEB45340.1| carbohydrate ABC transporter membrane protein [Verrucosispora maris
           AB-18-032]
          Length = 271

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 82/229 (35%), Gaps = 7/229 (3%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
           ++   +  +    +D     L   +  Q+   +     +A V+SLL     A   ++   
Sbjct: 40  IYDTSKALIFSPTLDNYGTVLQQANYIQFIGNSLWVAFAATVLSLLLGVPAAYSMSRFNM 99

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
               LV ++   + IP +  L      F NL         + +   +    +  +    +
Sbjct: 100 RKSALVVLM--ARVIPGVSLLVPWYYVFSNLRMVGGFSVLILSHMFVSLPLIVYIMMGFF 157

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
             L   P +LEE ++   L+    F  + +P S+PG+    ++S    W   + + ++  
Sbjct: 158 DGL---PDELEEAAQVDGLTPIGAFRRVTLPLSVPGIATAGILSFIFSWNNFMFALVLSG 214

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
            DT      I  ++       D   ++ A   +   I +    + + ++
Sbjct: 215 ADTKTLPVAIFDFV--GYASIDWGGLMAATTVVTLPIMIIALFVQKYIV 261



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV----FFPLVVSCV 441
           +++      +++ ++ +P    +       S +     +    P       ++ +  +  
Sbjct: 72  SLWVAFAATVLSLLLGVPAAYSMSRFNMRKSAL--VVLMARVIPGVSLLVPWYYVFSNLR 129

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                +  +   + +      YI+     G    P++ +E A    +T    +R + LP 
Sbjct: 130 MVGGFSVLILSHMFVSLPLIVYIMMGFFDG---LPDELEEAAQVDGLTPIGAFRRVTLPL 186

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P   T  I +   +WN  + + V S          +  ++  +     +  ++    +
Sbjct: 187 SVPGIATAGILSFIFSWNNFMFALVLSGADTKTLPVAIFDFVGYA--SIDWGGLMAATTV 244

Query: 562 MCCFVLALNRFL 573
           +   ++ +  F+
Sbjct: 245 VTLPIMIIALFV 256


>gi|227874374|ref|ZP_03992558.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227839782|gb|EEJ50228.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 224

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 19/215 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFP 435
             T++ V +  +I+  I IP+G+         I     I   +  F  +    P  +   
Sbjct: 17  LATLYMVSISTLISYAIGIPLGVILVVTEEGSIAPNKIIHGILGFFTNIFRTIPFLILLV 76

Query: 436 LVVS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           +V+     + +  L P   +  L+I  +  YI   V +      +   E A S     ++
Sbjct: 77  MVLPITKALVHTTLGPKAIIPPLVI-ASAPYIARMVESSLKEVDSGVIEAAKSMGSDSFQ 135

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               ++LP   P    GA        + S ++     G +       G Y  ++      
Sbjct: 136 IIFKVLLPEARPSLYVGAAICMTSILSYSAMAGFVGGGGLGAIALNYGYYRYQT------ 189

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            +++L  +++   ++ L +  W  L  Y  +  +L
Sbjct: 190 -DMMLIAVVVLVVIVQLVQEFWMRLAKYSDKRGKL 223



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 10/146 (6%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILG 114
           +    T   +  + +IS         +         A ++ +  +L    +I ++IP L 
Sbjct: 14  KETLATLYMVSISTLISYAIGIPLGVILVVTEEGSIAPNKIIHGILGFFTNIFRTIPFLI 73

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L   +     L    +     A I  +  +    +   +  SL  +   + E ++S   
Sbjct: 74  LLVMVLPITKALVHTTL--GPKAIIPPLVIASAPYIARMVESSLKEVDSGVIEAAKSMGS 131

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +Q  + + +P + P L     + M
Sbjct: 132 DSFQIIFKVLLPEARPSLYVGAAICM 157


>gi|254486205|ref|ZP_05099410.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
 gi|214043074|gb|EEB83712.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. GAI101]
          Length = 561

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 73/217 (33%), Gaps = 28/217 (12%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF------- 118
            RT    +   +  +L  +  A + A        L+ IL ++       + +        
Sbjct: 341 LRTLFMSVCITLSCILLGYPVAWILANLPARTANLLMILVLL-----PFWTSLLVRTSAW 395

Query: 119 ------------TVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
                       T+V+   +     +     +   I A+    +  M   +Y  +  +P 
Sbjct: 396 KVMLQQQGVVNDTLVWLGVVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTVPP 455

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
                ++S   + W  FW +  P S+PG+    ++       + +  E++          
Sbjct: 456 SYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISN 515

Query: 224 GIGSYIALAIK-EQDLLAILYAMLTMLGVIFLYDQLL 259
            I  +I+ ++            +  +LG+ + YD+++
Sbjct: 516 RIAYHISSSLNWGLAAALGAILLAVVLGLYYAYDKIV 552



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 36/118 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  +V        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 409 LVWLGVVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTVPPSYLRAAKSLGATN 468

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S  
Sbjct: 469 WTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLN 526


>gi|183985267|ref|YP_001853558.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter ProZ
           [Mycobacterium marinum M]
 gi|183178593|gb|ACC43703.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter ProZ
           [Mycobacterium marinum M]
          Length = 248

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 71/226 (31%), Gaps = 17/226 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
                  +           L    +        A+  S L       +   + R  +++V
Sbjct: 4   LQQALSYLSTAANWTGSAGLAHRTAEHLEYTALAVTASALVAIPIGLIIGHTGRGQLLVV 63

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
             ++ ++++P         +  + L            I A+    +  +    Y  + ++
Sbjct: 64  SAVNGLRALP--------TLGVLLLGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASV 115

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              + + +R+  ++  Q    + +P ++P ++  +           +             
Sbjct: 116 DPLVVDAARAMGMTEAQVVLRVEMPNALPLILGGLR-------SATLQVVATATVAAYAS 168

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
           L G+G Y+   IKE+     L   L +  +    D LL   +  W+
Sbjct: 169 LGGLGRYLIDGIKERQFHIALVGALMVAALALSLDGLLA--LAGWA 212



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 11/212 (5%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q++ Y+     +     +       +    + +  ++++ IP+G+ IG        +   
Sbjct: 6   QALSYLSTAANWTGSAGLAHRTAEHLEYTALAVTASALVAIPIGLIIGHTGRGQLLVVSA 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
              L A P      L V         P + L LL +            AG ++      +
Sbjct: 66  VNGLRALPTLGVLLLGVLLFGLGLGPPIVALMLLGMPPLL----AGTYAGIASVDPLVVD 121

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +  +T  +    + +P   P  + G  +A       ++     +    +    GLG 
Sbjct: 122 AARAMGMTEAQVVLRVEMPNALPLILGGLRSA-------TLQVVATATVAAYASLGGLGR 174

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           Y+ +  ++  F   ++G L++    L+L+  L
Sbjct: 175 YLIDGIKERQFHIALVGALMVAALALSLDGLL 206


>gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa
           SC2]
 gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus
           polymyxa SC2]
          Length = 482

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL-AAKSRRLGMVLVP 102
            P +      I+  + +L +    T L  L +++++ L   V+  +  + ++    +   
Sbjct: 262 APVERSRWELISASLPALIKGMGNTLLYTLVSLLVAFLLGLVFGFMKVSHNKVFRGIATV 321

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVI----GAELAAIFAIFTSQVWNMTFSMYQSL 158
            +D+ + IP+       + +F+     + +       +AA+  +  +    +T  +   +
Sbjct: 322 FVDVFRGIPL-----IVLAFFIYFGIPQALDFKMPLFVAAVLTLSLNAGAYVTEIIRGGI 376

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIV 214
            +I     E +RS  L        + +P +    +P  +  +++++         S + V
Sbjct: 377 QSIDPGQMEAARSLGLPYRTAMLKIILPQAVKIMIPSFINQLVITLKDT------SILSV 430

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +G   +   G    IA   +  D+  +  A++ ++ +  L
Sbjct: 431 IGLVELTQSG-KIIIARTFQSFDIWLV-VAVMYLIVITVL 468



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 28/204 (13%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIW-IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +I     T+   +V +++A ++ +  G   +            F  +    P      +V
Sbjct: 279 LIKGMGNTLLYTLVSLLVAFLLGLVFGFMKVSHNKVFRGIATVFVDVFRGIPL-----IV 333

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA--------GASAFPNDFKEVASSFHIT 489
           ++   Y+ +   L   + +       +  N  A        G  +      E A S  + 
Sbjct: 334 LAFFIYFGIPQALDFKMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLP 393

Query: 490 GWRWWRYIILPGI----FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
                  IILP       P ++   +         S++      G + L  +G    I  
Sbjct: 394 YRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVI------GLVELTQSG---KIII 444

Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569
           +    SF  + L V +M   V+ +
Sbjct: 445 ARTFQSFD-IWLVVAVMYLIVITV 467


>gi|296394995|ref|YP_003659879.1| binding-protein-dependent transporter inner membrane component
           [Segniliparus rotundus DSM 44985]
 gi|296182142|gb|ADG99048.1| binding-protein-dependent transport systems inner membrane
           component [Segniliparus rotundus DSM 44985]
          Length = 213

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 19/200 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT--FTVVYFMNLYPGK 130
           L  +VI +          A++           +I+ +IP L        V+ F  L P  
Sbjct: 23  LLPIVIGVAVALPIGAAVARAPWARRFSDACSNIVFTIPSLALFAVLPGVLGFGFLSPLN 82

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V+ A      A+    +        ++L  +  D+   + +   S   +   + +P + P
Sbjct: 83  VVAALTLYTAAMQVKTIP-------EALAAVDPDVLAAADAVGWSPTARLVRVDLPLAAP 135

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L  N+ +  +     V    +I VG       G+G       +      I+  ++ +L 
Sbjct: 136 VLFANLRVVAAANISMVAVGSVIGVG-------GLGQLFLSGYQRDYPDMIVAGIIAVLV 188

Query: 251 VIFLYD---QLLFRPMIVWS 267
           +    D    +L R +  W+
Sbjct: 189 LALGVDAVLVVLGRALTPWT 208



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 59/180 (32%), Gaps = 8/180 (4%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I+I   + +P+G  +   P         + ++   P+   F ++   + +  L+P   ++
Sbjct: 26  IVIGVAVALPIGAAVARAPWARRFSDACSNIVFTIPSLALFAVLPGVLGFGFLSPLNVVA 85

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L ++     +   +    +A   D    A +   +       + LP   P         
Sbjct: 86  ALTLYTAAMQVK-TIPEALAAVDPDVLAAADAVGWSPTARLVRVDLPLAAPVLFANLRVV 144

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +   V  V   G       GLG       ++     +V G++ +    L ++  L
Sbjct: 145 AAANISMVAVGSVIGVG-------GLGQLFLSGYQRDYPDMIVAGIIAVLVLALGVDAVL 197


>gi|191637830|ref|YP_001986996.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|190712132|emb|CAQ66138.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus
           casei BL23]
 gi|327381896|gb|AEA53372.1| hypothetical protein LC2W_1038 [Lactobacillus casei LC2W]
 gi|327385057|gb|AEA56531.1| hypothetical protein LCBD_1033 [Lactobacillus casei BD-II]
          Length = 294

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   +L AM+IS   +          AK   L  V+   ++I+ S+P +    F  +
Sbjct: 62  LFNSFYLLLLAMLISTPISLGAGIYLSEYAKKNWLTDVIRTSIEILSSLPSVVVGLFGFL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +  K   + L+   A+    +  +T ++  SL  +  +  E   +  LS W+   
Sbjct: 122 IFVLQF--KFGFSILSGALALTVFNLPLLTRNVEDSLRGVEYEQREAGLALGLSRWETVL 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
           ++ +P ++PG++  M++   
Sbjct: 180 HVVIPEALPGIITGMILGAG 199



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 66/184 (35%), Gaps = 21/184 (11%)

Query: 352 VCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
           +  +   I +Q + +I  HF  +            I +F    L+++A +I  P+ +  G
Sbjct: 25  LASLLGYILFQGLPHISWHFLTSPAQSFEAGGGIGIQLFNSFYLLLLAMLISTPISLGAG 84

Query: 410 FR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
                      ++  I+   ++L++ P+     +VV    +            ++ G   
Sbjct: 85  IYLSEYAKKNWLTDVIRTSIEILSSLPS-----VVVGLFGFLIFVLQFKFGFSILSGALA 139

Query: 463 YILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             +FN+        +  +       E   +  ++ W    ++++P   P  +TG I   G
Sbjct: 140 LTVFNLPLLTRNVEDSLRGVEYEQREAGLALGLSRWETVLHVVIPEALPGIITGMILGAG 199

Query: 516 GAWN 519
             + 
Sbjct: 200 RVFG 203


>gi|86356165|ref|YP_468057.1| phosphate ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86280267|gb|ABC89330.1| phosphate ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 440

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  + +SL      +      A   +L  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLALSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 74/188 (39%), Gaps = 6/188 (3%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
            N++V+     +   +    A+   + +  ++  + +  +   +      +++ +++++ 
Sbjct: 175 KNRKVNDKQVNWMNQLKASGALTKEFNTGLFVNGNSSRPEAAGLGVALIGSLYLMLIVLA 234

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP---N 449
           ++  I +   I++     +  ++  I+     LAA P+ V+  L +S    +   P   +
Sbjct: 235 LSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLLGLSVFINFIGLPRSAS 294

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   A P   +  A     +  +   + +LP   P  +TG
Sbjct: 295 LVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQMVFHHVLPLAMPGILTG 354

Query: 510 AITACGGA 517
            I     A
Sbjct: 355 TIIGLAHA 362


>gi|15615555|ref|NP_243859.1| phosphate ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10175615|dbj|BAB06712.1| phosphate ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 318

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 6/147 (4%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      T + M+ A+ I L+     +  A  S RL   L P+L+++  IP + +  F  
Sbjct: 95  LTGTLISTVIAMVVAIPIGLMTAIFLSEYA--SDRLRRTLKPMLEVLAGIPTIVYGFFAF 152

Query: 121 VYFMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSG 176
            +   L    V G E   I     +    +  M  S+   ++ ++P  + E + +   + 
Sbjct: 153 TFVTPLLRHVVPGLEATNILSPGIVMGIMIIPMVASLSEDAMSSVPNAMREGALALGATK 212

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +    + +P ++ G+V + ++  S  
Sbjct: 213 LEVTTKVVIPAAISGIVASFVLGFSRA 239



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 27/224 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF------- 433
           +   ++  +IA ++ IP+G+             +   ++P  ++LA  P  V+       
Sbjct: 95  LTGTLISTVIAMVVAIPIGLMTAIFLSEYASDRLRRTLKPMLEVLAGIPTIVYGFFAFTF 154

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL+   V        L   ++M       +        S+ PN  +E A +   T   
Sbjct: 155 VTPLLRHVVPGLEATNILSPGIVMGIMIIPMVASLSEDAMSSVPNAMREGALALGATKLE 214

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAES 546
               +++P      V   +     A   +++  +AS         +      + AYI E 
Sbjct: 215 VTTKVVIPAAISGIVASFVLGFSRAIGETMIVTIASGSSKNFTFDVTQSMQTMTAYIVEV 274

Query: 547 TE----KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T      GS     L  + M  FV     FL + L  Y +R  R
Sbjct: 275 TGGDAPAGSTIYYSLYAVAMTLFVFT---FLMNLLARYISRRFR 315


>gi|239617107|ref|YP_002940429.1| phosphate ABC transporter, inner membrane subunit PstA [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505938|gb|ACR79425.1| phosphate ABC transporter, inner membrane subunit PstA [Kosmotoga
           olearia TBF 19.5.1]
          Length = 278

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           ++I+L F+     L A           L  +++   +++ SIP + F  F +  F   + 
Sbjct: 66  LLIALTFSIPIGILGAVFLSEYSSENWLKKIILGSTNVLSSIPSIVFGLFGLALFSITFG 125

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            +           +    +  +  + +++L  +P    E S +   +  +  + + +P S
Sbjct: 126 FRTSLLSGGLTLGVL--ALPYIISNTHEALKAVPDSYREASMALGATKGETVFKVVIPAS 183

Query: 189 MPGLVWNMMMSMS 201
           +  ++  +++S+ 
Sbjct: 184 ISRILTGVIISVG 196



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYY 444
           ++IA    IP+GI              +   I     +L++ P+ VF  F L +  +++ 
Sbjct: 66  LLIALTFSIPIGILGAVFLSEYSSENWLKKIILGSTNVLSSIPSIVFGLFGLALFSITFG 125

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   L +      YI+ N      A P+ ++E + +   T       +++P    
Sbjct: 126 FRTSLLSGGLTLGVLALPYIISNTHEALKAVPDSYREASMALGATKGETVFKVVIPASIS 185

Query: 505 YYVTGAITACG 515
             +TG I + G
Sbjct: 186 RILTGVIISVG 196


>gi|55822955|ref|YP_141396.1| phosphate ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55738940|gb|AAV62581.1| phosphate ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 300

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 92/228 (40%), Gaps = 9/228 (3%)

Query: 1   MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-- 58
           M    I+      +I  +   ++A ++V  +  ++L+ +           +  ++     
Sbjct: 1   MREREIMNAKKVDKIAISTLYVIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKA 60

Query: 59  -HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILG 114
              +      +   ++  ++IS+  +          AK  RL   +   ++I+ S+P + 
Sbjct: 61  GGGIGVQLYNSLFLLVITLIISVPLSMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPSVV 120

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
              F  + F+  +  +   + L+   A+    +  MT ++  SL  +     E   +  L
Sbjct: 121 VGLFGYLIFVVQF--QYGFSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGL 178

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           S W+   ++ +P ++PG+V  +++S SG  F   A+ +   G +   L
Sbjct: 179 SRWETICHVVIPEALPGIVTGIVLS-SGRIFGEAAALIYTAGQSAPAL 225



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 79/213 (37%), Gaps = 28/213 (13%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------ 383
              ++ + ++V  +     + +   +   +A   +  +V    +    ++  +       
Sbjct: 2   REREIMNAKKVDKIAISTLYVIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKAG 61

Query: 384 ---CITMFRVVVLIIIASIIWIPV----GIWIGFRP---HISSKIQPFAQLLAAFPANVF 433
               + ++  + L++I  II +P+    GI++        +S+ ++   ++L++ P+   
Sbjct: 62  GGIGVQLYNSLFLLVITLIISVPLSMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPS--- 118

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSF 486
             +VV    Y            ++ G     +FN+        +  +       E   + 
Sbjct: 119 --VVVGLFGYLIFVVQFQYGFSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLAL 176

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            ++ W    ++++P   P  VTG + + G  + 
Sbjct: 177 GLSRWETICHVVIPEALPGIVTGIVLSSGRIFG 209


>gi|307298066|ref|ZP_07577870.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916152|gb|EFN46535.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 278

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 79/196 (40%), Gaps = 12/196 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR-TTLRM 72
           RI   IF ++++ LV  I+ I+  G        DI     ++   +S+ +     + L  
Sbjct: 5   RITKLIFGIISYTLVAVILAII--GFLVINGLDDISLEFLVSFPRNSMTEGGIWPSILGT 62

Query: 73  LSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              + I+LLF+     L+A       K  R   +++   +I+  IP + F  F +  F  
Sbjct: 63  FYFLSIALLFSVPVGILSAVYLSEYSKENRFQRLVLTANNILAGIPSVVFGMFGLSLFSI 122

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +              I    +  +  + ++SL  +P+   E S +   +  +  + + V
Sbjct: 123 TFGFGTSIISGGLTLGIM--SLPYIISNTHESLAAVPKSYREASMALGANKAETTFRIVV 180

Query: 186 PFSMPGLVWNMMMSMS 201
           P S   ++  +M+++ 
Sbjct: 181 PASFSRILTGVMIAVG 196



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASII 400
           ++      V+  +   +    +  I   F        +  G I  ++      + IA + 
Sbjct: 13  IISYTLVAVILAIIGFLVINGLDDISLEFLVSFPRNSMTEGGIWPSILGTFYFLSIALLF 72

Query: 401 WIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLW 451
            +PVGI                  +     +LA  P+ VF  F L +  +++      + 
Sbjct: 73  SVPVGILSAVYLSEYSKENRFQRLVLTANNILAGIPSVVFGMFGLSLFSITFGFGTSIIS 132

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L +   +  YI+ N     +A P  ++E + +           I++P  F   +TG +
Sbjct: 133 GGLTLGIMSLPYIISNTHESLAAVPKSYREASMALGANKAETTFRIVVPASFSRILTGVM 192

Query: 512 TACG 515
            A G
Sbjct: 193 IAVG 196


>gi|169633722|ref|YP_001707458.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           baumannii SDF]
 gi|169152514|emb|CAP01488.1| D-and L-methionine transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii]
          Length = 219

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTVDTMLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  W++ +P ++PG+V    +++
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI 154



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 10/146 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           TM  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TMLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNAS 521
           +++LP   P  V G         N+S
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSS 161


>gi|108760429|ref|YP_632951.1| phosphate ABC transporter permease PstC [Myxococcus xanthus DK
           1622]
 gi|108464309|gb|ABF89494.1| phosphate ABC transporter, permease protein PstC [Myxococcus
           xanthus DK 1622]
          Length = 332

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123
           T + ML A+ + +      A  A   RRL  +L PI++++  IP  +LGF    V+    
Sbjct: 112 TLVSMLVAVPMGVFSALFVAEFA--PRRLRELLKPIIELLAGIPSVVLGFFALMVLSPVV 169

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +L+          A  A+  + V  +      +L  +PR   E S +   + W+  W +
Sbjct: 170 KDLFHLDRPLNGTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKV 229

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +P + PG++   ++         +   M      ++ 
Sbjct: 230 VLPAAAPGILAACVLGFGRAIGETMIVLMASGNADIVS 267



 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 78/216 (36%), Gaps = 28/216 (12%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPFA 422
            F +Q V     +  I +F   + + +++ ++ +P+G++            +   ++P  
Sbjct: 87  PFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAVPMGVFSALFVAEFAPRRLRELLKPII 146

Query: 423 QLLAAFPANVFFPLVVSCVS-------YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASA 474
           +LLA  P+ V     +  +S       +     N  L+ L +      ++F V     +A
Sbjct: 147 ELLAGIPSVVLGFFALMVLSPVVKDLFHLDRPLNGTLAGLALALAIVPVIFTVSEDALTA 206

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P  ++E + +   T W     ++LP   P  +   +   G A   +++  +AS     +
Sbjct: 207 VPRSYREASLALGATLWETAWKVVLPAAAPGILAACVLGFGRAIGETMIVLMASGNADIV 266

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLI--MCCFVLA 568
                      S   G     +   +   M   V+ 
Sbjct: 267 -----------SWNLGDSARSLSATIAAEMGEVVVG 291


>gi|238027432|ref|YP_002911663.1| ABC transporter permease [Burkholderia glumae BGR1]
 gi|237876626|gb|ACR28959.1| ABC transporter, permease protein [Burkholderia glumae BGR1]
          Length = 398

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 51/147 (34%), Gaps = 8/147 (5%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +    A+R    +  +   +           A        L+P L+++Q+IP +      
Sbjct: 185 AFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIALFGIL 244

Query: 120 VV--------YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +V          +    G        A  A+F   +  +  S+   +  +   + E + +
Sbjct: 245 MVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIEAAAA 304

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             ++  Q+   + +  ++P ++  + +
Sbjct: 305 MGMTPRQRVLGVELALALPVILAGLRI 331



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 15/193 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS------- 439
           +  V      A  + +P+GI    RP   + + P   ++   P+   F +++        
Sbjct: 194 LALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIALFGILMVPLGLLAA 253

Query: 440 ------CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
                  +    + P      L        I+ +V+ G         E A++  +T  + 
Sbjct: 254 HLPLAAALGIGGIGPAPAFVAL-FLYALLPIVSSVVVGIDGVDARVIEAAAAMGMTPRQR 312

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
              + L    P  + G           + + + +   G       GLG    +    G+ 
Sbjct: 313 VLGVELALALPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLGQAATDLVLLGAL 372

Query: 553 PEVVLGVLIMCCF 565
           P + L  ++   F
Sbjct: 373 PTIALASVLSVVF 385


>gi|209695562|ref|YP_002263491.1| phosphate ABC transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
 gi|208009514|emb|CAQ79804.1| phosphate ABC transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
          Length = 308

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 13/216 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QYAS 66
           RIF  +F   A +  + +  I    ++E+      V +  I L    LP           
Sbjct: 32  RIFHVLFLSCAIIGTLSLATIAYFIVKESIPAFQQVGVSGIVLGQDWLPPALYGVFTMIV 91

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTV 120
            + +    A+++ +    + A   A+   +RL  ++ P ++++  IP + +    L   V
Sbjct: 92  ASVVSTFGAVLVGVPIGILTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLVIIV 151

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
               +++        LA I  +    +  +      S+  +P   +E S +   S     
Sbjct: 152 PLIQDVFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPATYKEGSLALGASKIFTI 211

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + + +P +  G++  +++ ++      +A  M++  
Sbjct: 212 FRILLPAARSGIMTGVILGIARALGETMAIIMVMGN 247



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 15/176 (8%)

Query: 374 QDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    VV    A ++ +P+GI             ++  I+P  +LLA
Sbjct: 76  QDWLPPALYGVFTMIVASVVSTFGAVLVGVPIGILTAIFIAEIAPKRLADIIRPAVELLA 135

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+         N  L   +++       ++        A P  
Sbjct: 136 GIPSVVYGFFGLVIIVPLIQDVFQVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPAT 195

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +KE + +   +       I+LP      +TG I     A   ++   +       +
Sbjct: 196 YKEGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMAIIMVMGNAPAM 251


>gi|254464765|ref|ZP_05078176.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206685673|gb|EDZ46155.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 542

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 43/217 (19%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF----- 118
            RT +  L+     ++  +  A + A   SR   ++++           L  L F     
Sbjct: 323 LRTLIMSLAITCSCIVLGYPVAWILANLPSRTANLLMI-----------LVLLPFWTSLL 371

Query: 119 ------------------TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQS 157
                             T+V+   +       +I  +   I A+    +  M   MY  
Sbjct: 372 VRTSAWKVMLQQQGVINDTLVWLGLVSDSDRLVMINNQFGTIVAMTHILLPFMILPMYSV 431

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  I       ++S   + W  FW +  P S+PG+    ++       + +  E++    
Sbjct: 432 MQTINPTYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTK 491

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            V     I + IA  I +     +  A+ T+L VI L
Sbjct: 492 GVF----ISNRIAFHISQSLNWGLAAALGTILLVIVL 524



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 4/138 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +        +   A S   T 
Sbjct: 391 LVWLGLVSDSDRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPTYLRAAKSLGATN 450

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I++S   G
Sbjct: 451 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNWG 510

Query: 551 SFPEVVLGVLIMCCFVLA 568
               +   +  +   ++ 
Sbjct: 511 ----LAAALGTILLVIVL 524


>gi|42783396|ref|NP_980643.1| phosphate ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206978001|ref|ZP_03238887.1| phosphate ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217961761|ref|YP_002340331.1| phosphate ABC transporter, permease protein [Bacillus cereus AH187]
 gi|222097715|ref|YP_002531772.1| phosphate ABC transporter , permease protein [Bacillus cereus Q1]
 gi|229141006|ref|ZP_04269549.1| ABC transporter permease protein [Bacillus cereus BDRD-ST26]
 gi|42739324|gb|AAS43251.1| phosphate ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206743801|gb|EDZ55222.1| phosphate ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217065548|gb|ACJ79798.1| phosphate ABC transporter, permease protein [Bacillus cereus AH187]
 gi|221241773|gb|ACM14483.1| phosphate ABC transporter, permease protein [Bacillus cereus Q1]
 gi|228642439|gb|EEK98727.1| ABC transporter permease protein [Bacillus cereus BDRD-ST26]
          Length = 288

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 81/206 (39%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGVSYLSLDFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI L F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPLSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++PR L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYQVVLPYAFPGIITGCTLAISRA 214



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P    
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    ++LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYQVVLPYAFPGIITGCTLAISRA 214


>gi|27467986|ref|NP_764623.1| phosphate ABC transporter [Staphylococcus epidermidis ATCC 12228]
 gi|251810816|ref|ZP_04825289.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876176|ref|ZP_06285043.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis SK135]
 gi|293366649|ref|ZP_06613326.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315531|gb|AAO04665.1|AE016747_162 phosphate ABC transporter [Staphylococcus epidermidis ATCC 12228]
 gi|251805651|gb|EES58308.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295201|gb|EFA87728.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis SK135]
 gi|291319418|gb|EFE59787.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329729354|gb|EGG65760.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis VCU144]
 gi|329732923|gb|EGG69268.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis VCU028]
 gi|329736953|gb|EGG73211.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis VCU045]
          Length = 301

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+      ++   +  +  +P + F       F+      +  + LAA   +    +  +
Sbjct: 113 ARDNIFTQIVKVSISNLAGVPSIVFGLLGYTLFVGA--AGLGNSVLAAALTMSLLILPVI 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             +  +++  +P  + E S     + WQ    + +P ++PG++   ++S+S  
Sbjct: 171 IVASQEAIRAVPSSVREASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRA 223



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 422 AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
              LA  P+ VF      +   +    N  L  +L M       I+        A P+  
Sbjct: 126 ISNLAGVPSIVFGLLGYTLFVGAAGLGNSVLAAALTMSLLILPVIIVASQEAIRAVPSSV 185

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E +       W+  R ++LP   P  +TG I +   A   +    +     I L T 
Sbjct: 186 REASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRALGETAPLVMIGIPTILLATP 243


>gi|304395944|ref|ZP_07377826.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304356313|gb|EFM20678.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 741

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 83/479 (17%), Positives = 153/479 (31%), Gaps = 59/479 (12%)

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGW 177
           ++     + PG+ +   L  I+         + F +   +   +   LEE S++ R S W
Sbjct: 288 SLATLFGIEPGRWL-YGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRASRW 346

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           + F  + +P   PGL    ++S          + M++ G   +    I   +  A  +  
Sbjct: 347 RTFSRISLPLMAPGLANAFLISFIES-MADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPS 405

Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297
                 A+L M+ + F     L + + +    F      G            R     R 
Sbjct: 406 R----AAVLAMILLGFTLTAFLVQRVWLAGKSFATVTGKGDGG---------RHVMLPRP 452

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG--V 355
           + YS +    P            G+I          L +N  + + +  F   V  G  V
Sbjct: 453 VRYSVYGMVIPWG---LFTLVIYGMIMIGGFVQSWGLNNNLTLDHYIRAFSVSVNQGQLV 509

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
             G+AW S                      T+   ++   + +I+ +     I  +    
Sbjct: 510 WRGVAWNSFW-------------------TTLEIALIAAPLTAIVGLLTAWLIVRQKFAG 550

Query: 416 SKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS- 473
            +   F  +L+ A P  V   + VS V  Y+L P       MI    + +  N+  G   
Sbjct: 551 RQTFEFMLMLSFAIPGTV---IGVSYVMAYNLPPLEMTGTAMILIACF-VFRNMPVGVRG 606

Query: 474 ------AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                        E + +     +R  R ++LP + P      + A   A  +       
Sbjct: 607 GIAAMSQLDKSLDEASLTLGANSFRTLRKVVLPLLKPAISAALVYAFVRAITSISAVIFL 666

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                ++ T+    YI    E G +   +    ++   +L +         L G R LR
Sbjct: 667 VSAQYNMATS----YIVGLVENGEYGVAIAYSSVLIVVMLLIIGLF---QLLVGERRLR 718


>gi|316934793|ref|YP_004109775.1| Substrate-binding region of ABC-type glycine betaine transporter
           [Rhodopseudomonas palustris DX-1]
 gi|315602507|gb|ADU45042.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Rhodopseudomonas palustris DX-1]
          Length = 515

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 91/266 (34%), Gaps = 21/266 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           + +LP Y        L+A+ + L+ +   A  A     L   L+    I+Q+IP L  L 
Sbjct: 13  LSNLPDYLGAHVRVSLAALALGLILSLPLAIFARHRPLLRGALLGFAGIVQTIPGLALLA 72

Query: 118 FTVVYFMNLYPGKVI--------GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 + L                 L A+ A+    +  +  +    L  I   L E +
Sbjct: 73  LFYPLLLALAALSASTFGVSFSAFGFLPAVLALALYSMLPVLRNTITGLDGIDPALIEAA 132

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +   ++  Q    + +P ++P ++  +  +    W    A+    +G T      +G+YI
Sbjct: 133 QGVGMTERQVLTMVELPLALPVIMAGIRTA--AVWVIGTATLSTPIGQTS-----LGNYI 185

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL------FRPMIVWSNKFRLERTTGIYPADS 283
              ++ Q+ + +L+       +    DQLL       R    W   F       I  A  
Sbjct: 186 FAGLQTQNWILVLFGCAAAAVLALAVDQLLALVEIGLRRGSRWRIGFGTTGIVAIVIATL 245

Query: 284 WVLYLFRKTNFLRFIGYSSWNFFSPL 309
                 R +  +    ++     + L
Sbjct: 246 LPGVAARTSYVIGAKTFTEQYVLAAL 271



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L +   +   +L N I G         E A    +T  +    + LP   P  + G
Sbjct: 99  LPAVLALALYSMLPVLRNTITGLDGIDPALIEAAQGVGMTERQVLTMVELPLALPVIMAG 158

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             TA    W     +     G        LG YI    +  ++  V+ G
Sbjct: 159 IRTAA--VWVIGTATLSTPIGQTS-----LGNYIFAGLQTQNWILVLFG 200


>gi|76801636|ref|YP_326644.1| phosphate ABC transporter permease [Natronomonas pharaonis DSM
           2160]
 gi|76557501|emb|CAI49081.1| ABC-type transport system permease protein II (probable substrate
           phosphate) 1 [Natronomonas pharaonis DSM 2160]
          Length = 302

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 83/213 (38%), Gaps = 21/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T + ++ +  I+L    + A   ++   RR   VL P L+I+  +P + +    ++F   
Sbjct: 81  TMMIVVGSAAIALPVGVLTAIYLSEYADRRTRKVLKPTLEILAGVPTIVYGFFAISFITP 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++P       L+A   +    +  ++     ++ ++P DL         + ++   
Sbjct: 141 QIQRVFPETGTFNALSAAIVVGIMIIPMVSSLSEDAMSSVPDDLRNAGYGLGATKFEVST 200

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP---------------GIG 226
            + +P ++ G++ + ++++S      +A  +       I L                GIG
Sbjct: 201 QIVLPAAVSGILASFVLAISRAIGETMAVTLAAGMSPTITLDPLEEIQTMTAYMVEIGIG 260

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                +I  Q L A+   +  M   + +  QL+
Sbjct: 261 DVSVGSIGYQSLFAVGLLLFVMTLAMNVLSQLV 293



 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 62/206 (30%), Gaps = 14/206 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
             I    +   +        I +  +      +    +     ++  +++++ ++ I +P
Sbjct: 35  FGIVLVLITGSIPFFREVSVIEFFTSTEWSPRIEPNSYGVLPLVWGTMMIVVGSAAIALP 94

Query: 404 VGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           VG+                 ++P  ++LA  P  V+    +S ++               
Sbjct: 95  VGVLTAIYLSEYADRRTRKVLKPTLEILAGVPTIVYGFFAISFITPQIQRVFPETGTFNA 154

Query: 458 FGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
                 +   +I           S+ P+D +        T +     I+LP      +  
Sbjct: 155 LSAAIVVGIMIIPMVSSLSEDAMSSVPDDLRNAGYGLGATKFEVSTQIVLPAAVSGILAS 214

Query: 510 AITACGGAWNASIVSEVASWGHIHLR 535
            + A   A   ++   +A+     + 
Sbjct: 215 FVLAISRAIGETMAVTLAAGMSPTIT 240


>gi|99078373|ref|YP_611631.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99035511|gb|ABF62369.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 287

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 71/205 (34%), Gaps = 7/205 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVPILDIMQSIPILGF-LTFTV 120
           QY   + +  +++ +I++L         A+ R  G       L + +++P +   L   +
Sbjct: 79  QYFRNSLIVSVTSTLIAILIGMAGGYAFARYRFKGKSGYFVGLMLFRAVPGVALSLPLFI 138

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V+          G  LA +       +W            IP++L E +     + WQ F
Sbjct: 139 VFARVGIIDTHFGLILAYVAMNVPFTIWL----TDGFFRQIPKELHEAAEIDGCTRWQAF 194

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W +  P +  G+    + +    W     +  +        +P +G     A    +   
Sbjct: 195 WRVEFPVARSGVASAAIFAFLTSWNEFALASQLTRSVGSKTMP-VGLLDFTAEFTINWGG 253

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
           +    + M+    +   ++ + +I 
Sbjct: 254 MCALAVLMIVPALILTFIVQKHLIA 278



 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 2/143 (1%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPL 436
           V      ++   V   +IA +I +  G                   L  A P      PL
Sbjct: 77  VFQYFRNSLIVSVTSTLIAILIGMAGGYAFARYRFKGKSGYFVGLMLFRAVPGVALSLPL 136

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +       ++ +  L L  +     + ++         P +  E A     T W+ +  
Sbjct: 137 FIVFARVGIIDTHFGLILAYVAMNVPFTIWLTDGFFRQIPKELHEAAEIDGCTRWQAFWR 196

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           +  P       + AI A   +WN
Sbjct: 197 VEFPVARSGVASAAIFAFLTSWN 219


>gi|327192730|gb|EGE59666.1| phosphate ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 440

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  + +SL      +      A   +L  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLALSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 74/188 (39%), Gaps = 6/188 (3%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
            N++V+     +   +    A+   + +  ++  + +  +   +      +++ +++++ 
Sbjct: 175 KNRKVNDKQVTWMNQLKASGALQKQFNTGLFVNGNSSRPEAAGLGVALIGSLYLMLIVLA 234

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP---N 449
           ++  I +   I++     +  ++  I+     LAA P+ V+  L +S    +   P   +
Sbjct: 235 LSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLLGLSVFINFIGLPRSAS 294

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   A P   +  A     +  +   + +LP   P  +TG
Sbjct: 295 LVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQMVFHHVLPLAMPGILTG 354

Query: 510 AITACGGA 517
            I     A
Sbjct: 355 TIIGLAHA 362


>gi|262201514|ref|YP_003272722.1| binding-protein-dependent transporter inner membrane component
           [Gordonia bronchialis DSM 43247]
 gi|262084861|gb|ACY20829.1| binding-protein-dependent transport systems inner membrane
           component [Gordonia bronchialis DSM 43247]
          Length = 246

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 17/230 (7%)

Query: 31  IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           +I ++  G           +    +L   +L           ++A VI +        L 
Sbjct: 18  VILVIGVGYFTWYTTTTFTETEEKSLGWSTLQTTILDHIKLTVTATVIVIAVAIPLGILL 77

Query: 91  AKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
            +   RR   ++V + ++ Q+ P +G L     +    +         AA+  +    V 
Sbjct: 78  TRPALRRYSPIVVNLANVGQAAPAVGLLVLFTFWLGVGF--------KAAVVGLVVYAVL 129

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  +    L  +     E SR    SG +    + +P ++P ++  +  +       +V
Sbjct: 130 PILQNTIVGLRQVDARTIEASRGIGYSGLRTLVQVELPLAVPVILNGVRTA-------LV 182

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    T I    +G+ I   I       ++   + +  +  + D L
Sbjct: 183 ILVGTATLSTFIGASSLGTLITTGITLFLPKLLVSGAILVGLLALIIDWL 232



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 19/197 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVSYYHL 446
           V   +I   + IP+GI          +  P    LA      PA     L    +     
Sbjct: 60  VTATVIVIAVAIPLGIL--LTRPALRRYSPIVVNLANVGQAAPAVGLLVLFTFWLGVGFK 117

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L +  +      IL N I G         E +     +G R    + LP   P  
Sbjct: 118 AAVVGLVVYAVL----PILQNTIVGLRQVDARTIEASRGIGYSGLRTLVQVELPLAVPVI 173

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           + G  TA       + +S            + LG  I           +V G +++    
Sbjct: 174 LNGVRTALVILVGTATLSTFIG-------ASSLGTLITTGITLFLPKLLVSGAILVGLLA 226

Query: 567 LALNRFLWHPLYLYGTR 583
           L ++      L+ +   
Sbjct: 227 LIID--WLGRLFEFAAT 241


>gi|123968310|ref|YP_001009168.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           AS9601]
 gi|112818718|gb|ABI23482.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           AS9601]
 gi|123198420|gb|ABM70061.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           AS9601]
          Length = 315

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 93/270 (34%), Gaps = 34/270 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++++GII ++     E+     +  +V    +       A       L    +SLL 
Sbjct: 34  FVAIILLGIILVVFFQSFESFSRYGLKFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLI 93

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPIL---------------GFLTFTV 120
           T       A         + +  ++   ++++ +IP +                F  F  
Sbjct: 94  TIPLGVGTAIFITEDFVPKVVREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLH 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM---YQSLCNIPRDLEEVSRSFRLSGW 177
            +F  +           ++ AI    V  +         SL  +P+ L   +     S W
Sbjct: 154 NFFGWIPLFSTEPTGRNSLLAIMILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRW 213

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
           +  + + +P ++ G++  +++++       +A  MI+            PG  I S +A 
Sbjct: 214 KTIFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLAN 273

Query: 232 AIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              E D   + ++ YA   ++ +  + +  
Sbjct: 274 QFGEADGSQVSSLFYAAFVLMILSLVVNIF 303



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 88/278 (31%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +    +V       ++   G      +  + +   +     ++  +V   ++ +I I
Sbjct: 36  AIILLGIILVVFFQSFESFSRYGLKFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLITI 95

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYH-- 445
           P+G+              +   I  F +LLAA P+ V          P   +   + H  
Sbjct: 96  PLGVGTAIFITEDFVPKVVREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLHNF 155

Query: 446 -----------LNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
                         N  L+++++      I+ ++     +  P   +  A     + W+ 
Sbjct: 156 FGWIPLFSTEPTGRNSLLAIMILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKT 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEK 549
              +ILP      + G + A G A   ++   +          + L  G  I    + + 
Sbjct: 216 IFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLANQF 275

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L    FVL +   + +    +  +   L
Sbjct: 276 GEADGSQVSSLFYAAFVLMILSLVVNIFAQWLVKKFSL 313


>gi|108801928|ref|YP_642125.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119871080|ref|YP_941032.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126437909|ref|YP_001073600.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
 gi|108772347|gb|ABG11069.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. MCS]
 gi|119697169|gb|ABL94242.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. KMS]
 gi|126237709|gb|ABO01110.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium sp. JLS]
          Length = 222

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 76/198 (38%), Gaps = 15/198 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+ LL       L  ++  L  +      I+ +IP L          + L     I
Sbjct: 23  LIPIVLGLLIAVPLGALVQRTTALRRLTTITASIIFTIPSLALF-----VVLPLIIPTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I A+    V  +  ++ ++L  +   + + + +       +   + +P ++P L
Sbjct: 78  LDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYKPLTRMLKIELPLAVPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           + ++ +        V    M+ VG  VI + G+G++     +      I+  ++ +  + 
Sbjct: 138 IASLRV------VAVTNISMVSVGS-VIGVGGLGTWFTEGYQANKSDQIVAGIIAIFVLA 190

Query: 253 FLYDQLLF---RPMIVWS 267
            + D L+    + +  W+
Sbjct: 191 VVIDTLIMLIGKALTPWA 208



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 62/183 (33%), Gaps = 8/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++ I++  +I +P+G  +     +       A ++   P+   F +V+  +    +    
Sbjct: 23  LIPIVLGLLIAVPLGALVQRTTALRRLTTITASIIFTIPSLALF-VVLPLIIPTRILDEA 81

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + + +   T   ++  V     A      + A++           I LP   P  +   
Sbjct: 82  NVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYKPLTRMLKIELPLAVPVLIASL 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   +   V  V   G       GLG +  E  +     ++V G++ +    + ++
Sbjct: 142 RVVAVTNISMVSVGSVIGVG-------GLGTWFTEGYQANKSDQIVAGIIAIFVLAVVID 194

Query: 571 RFL 573
             +
Sbjct: 195 TLI 197


>gi|313679400|ref|YP_004057139.1| maltose ABC transporter membrane protein;trehalose ABC transporter
           membrane protein;palatinose ABC transporter membrane
           protein;sucrose ABC transporter membrane protein
           [Oceanithermus profundus DSM 14977]
 gi|313152115|gb|ADR35966.1| maltose ABC transporter membrane protein;trehalose ABC transporter
           membrane protein;palatinose ABC transporter membrane
           protein;sucrose ABC transporter membrane protein
           [Oceanithermus profundus DSM 14977]
          Length = 279

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 80/197 (40%), Gaps = 2/197 (1%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +T+      ++SL      A    + R LG     +   + S+ +   ++     ++
Sbjct: 71  LFNSTVVAGVTTLLSLFIGSTAAYALGRFRFLGK--RTVFYAILSVSMFPQISVLGGMYI 128

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +     A IF+     +    + +   + +IPR+LEE +     + WQ  W + 
Sbjct: 129 LVRSMGLYNTWWALIFSYTIFTLPFTIWVLTSFVRDIPRELEESAFVDGATPWQVLWKVL 188

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P   PGLV   +++  G W   + +    V D+   +P   ++ + A + +   A + A
Sbjct: 189 LPLMAPGLVTAGLLAFIGAWNEFLFALTFTVDDSARTVPVAIAFFSGASQYELPWAQIMA 248

Query: 245 MLTMLGVIFLYDQLLFR 261
              ++ V  +   L+F+
Sbjct: 249 ASVIVTVPLIVLVLVFQ 265



 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 3/189 (1%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHIS-SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V  +++  I       +G    +    +      ++ FP       +   V    L    
Sbjct: 80  VTTLLSLFIGSTAAYALGRFRFLGKRTVFYAILSVSMFPQISVLGGMYILVRSMGLYNTW 139

Query: 451 WLSLL-MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           W  +      T  + ++ + +     P + +E A     T W+    ++LP + P  VT 
Sbjct: 140 WALIFSYTIFTLPFTIWVLTSFVRDIPRELEESAFVDGATPWQVLWKVLLPLMAPGLVTA 199

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            + A  GAWN  + +   +           +  +   S  +  + +++   +I+   ++ 
Sbjct: 200 GLLAFIGAWNEFLFALTFTVDDSARTVPVAIAFFSGASQYELPWAQIMAASVIVTVPLIV 259

Query: 569 LNRFLWHPL 577
           L       L
Sbjct: 260 LVLVFQQRL 268


>gi|330446296|ref|ZP_08309948.1| phosphate ABC transporter, permease protein PstC [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490487|dbj|GAA04445.1| phosphate ABC transporter, permease protein PstC [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 303

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 81/216 (37%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---QYASRTTLR 71
            F N+F L A + ++ +I I     +E         I  I L    LP      +   + 
Sbjct: 28  FFKNLFMLSAAIGILSLITIGYFIFREGYAAFAQAGITGIVLGTDWLPPALYGIAPMIVA 87

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
            L +   +++       L A        +RL  ++ P+++++  IP + +    L   V 
Sbjct: 88  SLVSTAGAVVIGVPIGVLTAIFIAEVAPKRLADLIRPMIELLAGIPSVVYGFFGLVIIVP 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              + +        LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 148 LIQDWFNVPAGNTILAGIIVLAVMILPTVITVSETSIRAVPRAYKEGSLALGASSMFTIF 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L VP +  G++  +++ ++      +A  M++   
Sbjct: 208 KLLVPAARSGIMTGVILGVARALGETMAIIMVMGNS 243



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 75/231 (32%), Gaps = 17/231 (7%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            R  F +N   L +   +  ++ I +F    G A        G ++        LY I  
Sbjct: 24  WREVFFKNLFMLSAAIGILSLITIGYFIFREGYAAFAQAGITGIVLGTDWLPPALYGIAP 83

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--- 433
             +           A +I +P+G+             ++  I+P  +LLA  P+ V+   
Sbjct: 84  MIVASLVSTAG---AVVIGVPIGVLTAIFIAEVAPKRLADLIRPMIELLAGIPSVVYGFF 140

Query: 434 -----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
                 PL+    +    N  L   +++       ++        A P  +KE + +   
Sbjct: 141 GLVIIVPLIQDWFNVPAGNTILAGIIVLAVMILPTVITVSETSIRAVPRAYKEGSLALGA 200

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +       +++P      +TG I     A   ++   +       +    L
Sbjct: 201 SSMFTIFKLLVPAARSGIMTGVILGVARALGETMAIIMVMGNSPAMPEGLL 251


>gi|310814682|ref|YP_003962646.1| phosphate ABC transporter, permease protein [Ketogulonicigenium
           vulgare Y25]
 gi|308753417|gb|ADO41346.1| phosphate ABC transporter, permease protein [Ketogulonicigenium
           vulgare Y25]
          Length = 444

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 51/142 (35%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  + +SL      +      A   R   ++   +  + ++P + F    + 
Sbjct: 221 MLGSLAMMLVVLALSLPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGILGLA 280

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+ +         +  +       +  +  S   +L  +P  + + +     S  Q  +
Sbjct: 281 VFIQIMHLPQSAPVVGGLVLTL-MTLPTIIISTRAALKAVPPSIRDAALGIGASRMQAVF 339

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P +MPG++   ++ ++  
Sbjct: 340 HHVLPLAMPGILTGTILGLAQA 361



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M   + ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 218 GVSMLGSLAMMLVVLALSLPIGVAASIYLEEFAPQNRFTDLIEVNISNLAAVPSIVFGIL 277

Query: 437 VVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    + +   +  +   L++   T   I+ +  A   A P   ++ A     +  + 
Sbjct: 278 GLAVFIQIMHLPQSAPVVGGLVLTLMTLPTIIISTRAALKAVPPSIRDAALGIGASRMQA 337

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 338 VFHHVLPLAMPGILTGTILGLAQA 361


>gi|256258787|ref|ZP_05464323.1| maltose transport system permease protein MALG [Brucella abortus
           bv. 9 str. C68]
 gi|260885114|ref|ZP_05896728.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
 gi|260874642|gb|EEX81711.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus bv. 9 str. C68]
          Length = 291

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +        W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTTWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 197 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 255

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 256 RGMCALAVVMIVPALAVTFVIQKHLV 281



 Score = 37.6 bits (86), Expect = 6.7,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 53/166 (31%), Gaps = 15/166 (9%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 152

Query: 449 NLWLSL----LMIFGTQWYI--LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L L    L I  T W I   F         P D  E A     T W+ +  +  P  
Sbjct: 153 HFGLILTYVALNIPFTTWLIDGFF------RQVPKDLAEAAQIDGCTRWQAFWQVEFPLA 206

Query: 503 FPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAEST 547
            P   +  I A    WN  ++ S++    +      GL  Y AE T
Sbjct: 207 GPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT 252


>gi|255318361|ref|ZP_05359594.1| phosphate ABC transporter, permease protein PstA [Acinetobacter
           radioresistens SK82]
 gi|262378591|ref|ZP_06071748.1| phosphate ABC transporter, permease PstA [Acinetobacter
           radioresistens SH164]
 gi|255304353|gb|EET83537.1| phosphate ABC transporter, permease protein PstA [Acinetobacter
           radioresistens SK82]
 gi|262299876|gb|EEY87788.1| phosphate ABC transporter, permease PstA [Acinetobacter
           radioresistens SH164]
          Length = 465

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 53/148 (35%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             L      +   ML  + IS+      A      A    +  ++   ++ + ++P + F
Sbjct: 240 SGLAGAFMGSLFMMLIVIFISIPIGVASAIYLEEFAPKNYITDIIEVNINNLAAVPSIVF 299

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                  F+       + A L     +    +  +  +   SL  +P  + + +     S
Sbjct: 300 GLLGAAIFIGWM-HLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGAS 358

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q  ++  +P ++PG++   ++ ++  
Sbjct: 359 RVQTIFHHVLPLALPGILTGAIIGVAQA 386



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 31/213 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL-VVSCVS 442
           + +++I   I IP+G+             +I+  I+     LAA P+ VF  L     + 
Sbjct: 250 LFMMLIVIFISIPIGVASAIYLEEFAPKNYITDIIEVNINNLAAVPSIVFGLLGAAIFIG 309

Query: 443 YYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + HL  +  L   L++   T   ++    A   A P   ++ A     +  +   + +LP
Sbjct: 310 WMHLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASRVQTIFHHVLP 369

Query: 501 GIFPYYVTGAITACG--------------GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              P  +TGAI                   A+ AS+ +                 ++ + 
Sbjct: 370 LALPGILTGAIIGVAQALGETAPLLLIGMSAFVASVPTSPLDQSTALPVQI----FLWQG 425

Query: 547 TEKGSF--PEVVLGVLIMCCFVLALNRF-LWHP 576
            E  +F        ++++   ++ LN   +W  
Sbjct: 426 NELRNFFEGRTAAAIIVLLALMIGLNSLAIWLR 458


>gi|262376069|ref|ZP_06069300.1| phosphate ABC transporter, permease PstA [Acinetobacter lwoffii
           SH145]
 gi|262309163|gb|EEY90295.1| phosphate ABC transporter, permease PstA [Acinetobacter lwoffii
           SH145]
          Length = 463

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 53/148 (35%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             L      +   M+  + IS+      A      A    +  V+   ++ + ++P + F
Sbjct: 238 SGLAGAFMGSLFMMMIVIFISIPIGVASAIYLEEFAPKNWITDVVEVNINNLAAVPSIVF 297

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                  F+       + A L     +    +  +  +   SL  +P  + + +     S
Sbjct: 298 GLLGAAIFIGWM-HLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGAS 356

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q  ++  +P ++PG++   ++ ++  
Sbjct: 357 RIQTVFHHVLPLALPGILTGAIIGVAQA 384



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 23/209 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL-VVSCVS 442
           + +++I   I IP+G+              I+  ++     LAA P+ VF  L     + 
Sbjct: 248 LFMMMIVIFISIPIGVASAIYLEEFAPKNWITDVVEVNINNLAAVPSIVFGLLGAAIFIG 307

Query: 443 YYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + HL  +  L   L++   T   ++    A   A P   ++ A     +  +   + +LP
Sbjct: 308 WMHLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASRIQTVFHHVLP 367

Query: 501 GIFPYYVTGAITACGGAW----------NASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
              P  +TGAI     A            ++ V+ V +          +  ++ +  E  
Sbjct: 368 LALPGILTGAIIGVAQALGETAPLLLIGMSAFVASVPATPFDQSTALPVQIFLWQGNELR 427

Query: 551 SF--PEVVLGVLIMCCFVLALNRF-LWHP 576
           +F        ++++   +++LN   +W  
Sbjct: 428 NFFEGRTAAAIIVLLAMMISLNSLAIWLR 456


>gi|226313718|ref|YP_002773612.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226096666|dbj|BAH45108.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 284

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 74/192 (38%), Gaps = 8/192 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L  L  +V+S L       +A   RR+ + ++  +DI+ S+P L  L   V+  +   
Sbjct: 87  SLLMGLITVVLSTLIGVTLGIIAGYYRRVDLFIMQGMDILMSLPAL-LLAIAVIAVLGPG 145

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               + A + A+   +   V +   S+ +      ++  E  R+  +  WQ      +P 
Sbjct: 146 LTNAMIAVVIAVIPSYVRVVRSAVLSIRE------KEYIEAVRALGIRDWQILLKHILPN 199

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDT-VIPLPGIGSYIALAIKEQDLLAILYAML 246
            +  ++    +          A   + +G    +P  G   ++  A   Q     ++  L
Sbjct: 200 ILSPIIVLSTIQFGVSILAAAALSFLGLGAQPPMPEWGAMVFVGKAFLSQAWWMSIFPGL 259

Query: 247 TMLGVIFLYDQL 258
            ++ V+  ++ L
Sbjct: 260 AIMLVVLGFNLL 271



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 76/196 (38%), Gaps = 6/196 (3%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++  G I++   ++ ++++++I + +GI  G+   +   I     +L + PA +    V+
Sbjct: 80  LLHGGRISLLMGLITVVLSTLIGVTLGIIAGYYRRVDLFIMQGMDILMSLPALLLAIAVI 139

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP-NDFKEVASSFHITGWRWWRYI 497
           + +     N  + + + +I     Y+   V +   +    ++ E   +  I  W+     
Sbjct: 140 AVLGPGLTNAMIAVVIAVIPS---YVRV-VRSAVLSIREKEYIEAVRALGIRDWQILLKH 195

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI-HLRTTGLGAYIAESTEKGSFPEVV 556
           ILP I    +  +    G +  A+        G    +   G   ++ ++    ++   +
Sbjct: 196 ILPNILSPIIVLSTIQFGVSILAAAALSFLGLGAQPPMPEWGAMVFVGKAFLSQAWWMSI 255

Query: 557 LGVLIMCCFVLALNRF 572
              L +   VL  N  
Sbjct: 256 FPGLAIMLVVLGFNLL 271


>gi|222083119|ref|YP_002542484.1| iron(III) ABC transporter [Agrobacterium radiobacter K84]
 gi|221727798|gb|ACM30887.1| iron(III) ABC transporter [Agrobacterium radiobacter K84]
          Length = 741

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 83/541 (15%), Positives = 166/541 (30%), Gaps = 60/541 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYF 123
           A RT    +     + L    +A +A ++R      + +L I+  I P         + F
Sbjct: 223 AWRTLWLAIMTASGATLLGLCFALVATRTRFPFKKGLRLLTILPIITPPFVVGLALTLLF 282

Query: 124 M-------------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVS 169
                            PG+ +   L  I+         ++F +   +   +   +EE S
Sbjct: 283 GRAGVVTQTLASVFGTEPGRWL-YGLTGIWIAQVLSFTPISFLVLIGVVEGVSPSMEEAS 341

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           ++ R   W+ FW++ +P   PGL    +++          + M++ G   +    + + I
Sbjct: 342 QTLRADRWRTFWHVSLPLMKPGLANAFLIAFIES-MADFGNPMVLGGSHGV----LSTEI 396

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289
             A+          A+L M+ + F     + +   +    F      G   A    + L 
Sbjct: 397 FFAVVGSQNDPSRAAVLAMILLFFTMSAFIAQRFWLAGKSFATVTGKGDSGAH---IALP 453

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           R  +         W  F+ +   +           F          + Q       I W 
Sbjct: 454 RGLSIAVHAIVIPWMLFTVIVYTMILFG------GFVRTWGLDNSLTIQHYVKAFSIGWR 507

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
                   G+AW S                      TM   ++   + + + +     I 
Sbjct: 508 DDGGLAWTGVAWNSFW-------------------TTMEIALISAPLTAAVGLLTAYLIV 548

Query: 410 FRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            +  +   +  FA +++ A P  V     +   +   L       +L+       +   V
Sbjct: 549 RQKFVGRNLFEFALMMSFAIPGTVIGISYIMAFNLPPLEMTGTALILVACFVFRNMPVGV 608

Query: 469 IAGASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             G +A         E + +     +R  R +ILP + P      + +   A  +     
Sbjct: 609 RGGVAAMSQLDKSLDEASLTLGADSFRTIRKVILPLLRPAITAALVYSFVRAITSISAVI 668

Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
                  ++ T    AYI    E G +    + +      ++ +   +     L G R L
Sbjct: 669 FLVSAQYNMST----AYIVGLVENGEYG---VAIAYSSALIVVMIVIIASFQLLVGERRL 721

Query: 586 R 586
           R
Sbjct: 722 R 722


>gi|126696113|ref|YP_001090999.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9301]
 gi|112818720|gb|ABI23483.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9301]
 gi|126543156|gb|ABO17398.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           MIT 9301]
          Length = 315

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 95/270 (35%), Gaps = 34/270 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++++GII ++     E+     +  ++    +       A       L    +SLL 
Sbjct: 34  FVAIILLGIILVVFFQSFESFSRYGLKFLITSEWNPVKDEYGAFTAIYGTLVTSFLSLLI 93

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYF--------- 123
           T       A         +    ++   ++++ +IP +    +  F +  F         
Sbjct: 94  TIPLGVGTAIFITEDFVPKVFREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLH 153

Query: 124 -----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
                + L+  +  G        I    +  +  S+   SL  +P+ L   +     S W
Sbjct: 154 NFFGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRW 213

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
           +  + + +P ++ G++  +++++       +A  MI+            PG  I S +A 
Sbjct: 214 KTIFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLAN 273

Query: 232 AIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              E D   + ++ YA   ++ +  + +  
Sbjct: 274 QFGEADGSQVSSLFYAAFVLMILSLVVNIF 303



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 87/278 (31%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +    +V       ++   G      +  + +   +     ++  +V   ++ +I I
Sbjct: 36  AIILLGIILVVFFQSFESFSRYGLKFLITSEWNPVKDEYGAFTAIYGTLVTSFLSLLITI 95

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYH-- 445
           P+G+                  I  F +LLAA P+ V          P   +   + H  
Sbjct: 96  PLGVGTAIFITEDFVPKVFREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLHNF 155

Query: 446 -----------LNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
                         N  L++L++      I+ ++     +  P   +  A     + W+ 
Sbjct: 156 FGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKT 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEK 549
              +ILP      + G + A G A   ++   +          + L  G  I    + + 
Sbjct: 216 IFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLANQF 275

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L    FVL +   + +    +  +   L
Sbjct: 276 GEADGSQVSSLFYAAFVLMILSLVVNIFAQWLVKKFSL 313


>gi|17987997|ref|NP_540631.1| maltose transport system permease protein MALG [Brucella melitensis
           bv. 1 str. 16M]
 gi|237814696|ref|ZP_04593694.1| maltose transport system permease protein MALG [Brucella abortus
           str. 2308 A]
 gi|17983740|gb|AAL52895.1| maltose transport system permease protein malg [Brucella melitensis
           bv. 1 str. 16M]
 gi|237789533|gb|EEP63743.1| maltose transport system permease protein MALG [Brucella abortus
           str. 2308 A]
          Length = 294

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 9/206 (4%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 85  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 143

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +        W +          +P+DL E ++    + WQ
Sbjct: 144 FMVYSRIGIIDTHFGLILTYVALNIPFTTWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 199

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            FW +  P + PG+    + +    W     +  +        LP +G     A    D 
Sbjct: 200 AFWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDW 258

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMI 264
             +    + M+        ++ + ++
Sbjct: 259 RGMCALAVVMIVPALALTFVIQKHLV 284



 Score = 37.6 bits (86), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           V   +++ II +  G                   L  + P      PL +       ++ 
Sbjct: 96  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDT 155

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +  L L  +     +  + +       P D  E A     T W+ +  +  P   P   +
Sbjct: 156 HFGLILTYVALNIPFTTWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 215

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 216 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 273

Query: 568 AL 569
           AL
Sbjct: 274 AL 275


>gi|260888656|ref|ZP_05899919.1| D-methionine ABC transporter, permease protein [Selenomonas
           sputigena ATCC 35185]
 gi|330839933|ref|YP_004414513.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260861588|gb|EEX76088.1| D-methionine ABC transporter, permease protein [Selenomonas
           sputigena ATCC 35185]
 gi|329747697|gb|AEC01054.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 217

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T   ++ +M+++ L       L A + +        L   +  +++ ++SIP 
Sbjct: 9   LTKALGETVYMVVVSMIVASLIGIPLGVLLATTAKGQILECMPLNRAIGAVVNALRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AA+  +  + +  +   +  SL  +P  L E + S 
Sbjct: 68  FIILMVAIIPFTRFIVGTSIGTT-AAMVPLVLASIPFIGRQVETSLREVPAGLVEAALSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             + +Q    + +P SMP +V  +
Sbjct: 127 GATPYQIVRRVLLPESMPSIVAQL 150



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 19/203 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV +I+AS+I IP+G+ +             ++  I      L + P  +   + 
Sbjct: 16  TVYMVVVSMIVASLIGIPLGVLLATTAKGQILECMPLNRAIGAVVNALRSIPFIILM-VA 74

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +  ++  +  M+     +  +I   V       P    E A S   T ++  
Sbjct: 75  IIPFTRFIVGTSIGTTAAMVPLVLASIPFIGRQVETSLREVPAGLVEAALSMGATPYQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P  V    T        S ++     G +       G        +   P+
Sbjct: 135 RRVLLPESMPSIVAQLTTVVIALVGESAMAGAIGGGGLGDLAIRYGY-------QRFRPD 187

Query: 555 VVLGVLIMCCFVLALNRFLWHPL 577
           +++  +++   ++ + +FL + L
Sbjct: 188 IMIATVVILIVLVQIVQFLGNRL 210


>gi|168182428|ref|ZP_02617092.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum Bf]
 gi|237794837|ref|YP_002862389.1| methionine ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182674461|gb|EDT86422.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum Bf]
 gi|229261195|gb|ACQ52228.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum Ba4 str. 657]
          Length = 218

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTF 118
           +T   ++ A ++S +  F+ A + A         ++ +  +L  I+++++S+P    L  
Sbjct: 18  QTIYMIIIATILSFVIGFILAIVLAVTDERGIKPNKIIYGILSAIINVLRSVP-FIILAV 76

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F     G  IG E AAI  +  +    +   +  SL  +   L E ++SF  S  Q
Sbjct: 77  AIIPFTRSIVGTSIG-ENAAIVPLTIASAPFIARLIESSLKEVNPSLIEAAKSFGASNIQ 135

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
             + + V  ++P +  ++ ++
Sbjct: 136 IIFKVMVKEAIPSINLDLTLA 156



 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 6/149 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +    +           +  +   T+   V+  I+A ++ +     I     I   +   
Sbjct: 3   EITTLMKQIILPSLWQTIYMIIIATILSFVIGFILAIVLAVTDERGIKPNKIIYGILSAI 62

Query: 422 AQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             +L + P    A    P     +    +  N  +  L I    + I   + +       
Sbjct: 63  INVLRSVPFIILAVAIIPF-TRSIVGTSIGENAAIVPLTIASAPF-IARLIESSLKEVNP 120

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYY 506
              E A SF  +  +    +++    P  
Sbjct: 121 SLIEAAKSFGASNIQIIFKVMVKEAIPSI 149


>gi|78357807|ref|YP_389256.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220212|gb|ABB39561.1| amino acid ABC transporter membrane protein 2, PAAT family / amino
           acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 596

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 72/507 (14%), Positives = 151/507 (29%), Gaps = 35/507 (6%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-------LDIMQSIPI 112
           +L     R  +  ++  +IS        T+   +R       P+       ++  ++ P+
Sbjct: 52  NLGAEMLRGLVTTVNISLISSALALGLGTMLGLARL--SAFRPLRISASVVVEFFRNTPL 109

Query: 113 LGFLTFTVVYFMNLYPG-------KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           L  L F    F N+ P        +       A+ A+       M   +   L +IP+ L
Sbjct: 110 LVQLFFWYFAFPNVLPEAARQWVFEQNFEFWCAVSALGVYTGSFMAEVIRAGLQSIPKGL 169

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGL-------VWNMMMSMSGGWFFVVASEMIVVGDT 218
            E + S  LS +Q    + +P +   +         N M + S     +  +E+      
Sbjct: 170 LEAAYSSGLSYFQVLTRIILPLAFRTIIPPLGSEFLNNMKNSSLA-MVIGVAELTWHSQQ 228

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI--FLYDQLLFRPMIVWSNKFRLERTT 276
           V  L   G     A     L   L     M GV      D +  R + V      L    
Sbjct: 229 VQSLTFRGFEATTAATVLYLSLSLIISFIMNGVNGKLRLDTMQGRSVSVMFINALLAPLA 288

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
            +       +                    S       +    L +         L    
Sbjct: 289 ALRNLLYRPVRSALNARRAGRRAGGLAPRVSAWRAAAVRARSMLVLSLKGAYLALLAGLL 348

Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396
              V  ++   W  +   ++  + W        + +  ++   +     ++   ++ I +
Sbjct: 349 YTAVRGLMGFEWSVIADNISALLIWH-----FPNGSENEIFMGLGGLASSLLMALIAISV 403

Query: 397 ASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWL 452
           +  I + VG+               + +++   P      +    +  V   + +     
Sbjct: 404 SFFIGLAVGLGRCARNRIFRLPCLVYIEIIRGNPLIIVIFWIYFFLPVVFGAYFDVFWSA 463

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           ++ +   T  Y+   V AG    P    E A S  ++ ++  R I+LP      +   + 
Sbjct: 464 TIALTVFTGAYLAEIVRAGVQNIPAGQVEAAYSTGLSYFQTMRRIVLPQALKQMIPAIVG 523

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGL 539
                +  + ++ V     +     GL
Sbjct: 524 QFIAIFKDTSLAFVIGVLELTFVAQGL 550


>gi|303248512|ref|ZP_07334770.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio fructosovorans JJ]
 gi|302490132|gb|EFL50052.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio fructosovorans JJ]
          Length = 292

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
             ++ ++ A VL+ G + +        +    + ++   ++    +      T    L  
Sbjct: 27  LSSLVNMAALVLICGFLLVKGLPAISWSF---LTEMPRDSMTAGGILPCILGTIYLSLGT 83

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           M ++       A      A   R   ++   ++ +  +P + F  F + +F+  +    +
Sbjct: 84  MAVAFPLGVASAVYLNEYATPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFG---L 140

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           G  L +     +  V  +     + +L ++P+   E S     + WQ    + +P +MPG
Sbjct: 141 GVSLLSGILTLSILVLPVIIGTAEEALKSVPQTYREASLGLGATKWQTIRLVVLPAAMPG 200

Query: 192 LVWNMMMSMSGG 203
           ++   ++ +S  
Sbjct: 201 MLTGAILGLSRA 212



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S ++++    ++CG  +     +I +       +D +    +    +   + L +    
Sbjct: 27  LSSLVNMAALVLICGFLLVKGLPAISWSFLTEMPRDSMTAGGI-LPCILGTIYLSLGTMA 85

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLW 451
           +  P+G+                  I+     LA  P+ VF    ++    ++ L  +L 
Sbjct: 86  VAFPLGVASAVYLNEYATPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFGLGVSLL 145

Query: 452 LSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +      ++         + P  ++E +     T W+  R ++LP   P  +TGA
Sbjct: 146 SGILTLSILVLPVIIGTAEEALKSVPQTYREASLGLGATKWQTIRLVVLPAAMPGMLTGA 205

Query: 511 ITACGGA 517
           I     A
Sbjct: 206 ILGLSRA 212


>gi|239620764|ref|ZP_04663795.1| sugar ABC transporter permease protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|322691581|ref|YP_004221151.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|239516340|gb|EEQ56207.1| sugar ABC transporter permease protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|320456437|dbj|BAJ67059.1| sugar ABC transporter permease component [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 271

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 4/152 (2%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           M  ++V+S++  F   T     R  G   + +  +   +   G +   ++Y       K 
Sbjct: 74  MHLSIVLSIIVAFFACTALTLYRFRGRKPIMVFVLAIQMTSGGIIPQIIIYNQLGLLNKY 133

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            G  LA I  +    +WNM         NIP+D+ E +     + WQ  W +  P + PG
Sbjct: 134 SGLILAYIAMVLPFAIWNM----RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPG 189

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +V   + +    W   + +   +   +   LP
Sbjct: 190 IVSTSVFAFINAWNDYMIAYTFMKDQSKYTLP 221



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 69/262 (26%), Gaps = 9/262 (3%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
            +                      +R    +    FCVV    +   W  I  +      
Sbjct: 7   PRAVSHGAAQSAPPRRRTNPGKIARRAGTTILALLFCVVWFFPVY--WMIITAVKPRDEI 64

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433
                V W   ++       I+++ I+       +        K      L     +   
Sbjct: 65  MTTTPVFWPMHLS-------IVLSIIVAFFACTALTLYRFRGRKPIMVFVLAIQMTSGGI 117

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P ++       LN    L L  I     + ++N+       P D  E A+      W+ 
Sbjct: 118 IPQIIIYNQLGLLNKYSGLILAYIAMVLPFAIWNMRGFFLNIPKDIFESAAVEGANDWQI 177

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I  P   P  V+ ++ A   AWN  +++                +  +  T    F 
Sbjct: 178 LWKITFPLAAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLPVWLSSFSAPTMGTDFG 237

Query: 554 EVVLGVLIMCCFVLALNRFLWH 575
             +   +     V+     +  
Sbjct: 238 GQMAASVTFSLPVVVFFMLIQR 259


>gi|330684713|gb|EGG96411.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis VCU121]
          Length = 308

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 85/217 (39%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+ LF       AA       + ++  ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TIIAALFAVPIGLGAAIYLSEYATDKVRRIIKPILEILAGIPTIVFGFFALTFVTPILRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P       ++    +    +  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 VFPQLGSFNSISPGLVVGVMIIPLITSMSEDAMASVPNKIREGALGLGATKLEVAIKVVL 211

Query: 186 PFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPG-----IGSYIALAIKEQDL 238
           P +  G++ ++++++S   G   +V+          + L G      G  + +A  +   
Sbjct: 212 PAAASGILASIVLAVSRAIGETMIVSLAAGSTPTASLNLTGSIQTMTGYIVQVATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L    +  W S +FR E 
Sbjct: 272 GSDVYYSIYAVGFTLFIFTLAMNLLSQWISKRFREEY 308



 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 14/212 (6%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L I +  +   +          ++ +           +     +   + + IIA++  +P
Sbjct: 42  LGILFTLLTETITFFTRVSITEFLFSTDWNPFSAKPSYGIWALIIGTLKITIIAALFAVP 101

Query: 404 VGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPN 449
           +G+             +   I+P  ++LA  P  VF         P++ S         +
Sbjct: 102 IGLGAAIYLSEYATDKVRRIIKPILEILAGIPTIVFGFFALTFVTPILRSVFPQLGSFNS 161

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           +   L++       I        ++ PN  +E A     T       ++LP      +  
Sbjct: 162 ISPGLVVGVMIIPLITSMSEDAMASVPNKIREGALGLGATKLEVAIKVVLPAAASGILAS 221

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            + A   A   +++  +A+           G+
Sbjct: 222 IVLAVSRAIGETMIVSLAAGSTPTASLNLTGS 253


>gi|149181435|ref|ZP_01859931.1| YtlD [Bacillus sp. SG-1]
 gi|148850836|gb|EDL64990.1| YtlD [Bacillus sp. SG-1]
          Length = 137

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 6/117 (5%)

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           I          V         ++ +V  +F  T  + ++  ILP  FP  ++      G 
Sbjct: 17  ITIPLIPTTIVVYTSFREVDQNYLKVMQTFGATRSQTFKEAILPASFPTIISTLKVNVGL 76

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           +W   IV E        +   GLG  I    +  +F  V+L +LI+  F   + + +
Sbjct: 77  SWVGVIVGEFL------VSAKGLGYMIIYGFQVFNFSLVLLSLLIIAVFATLMYKIV 127



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
            T  +   T  +Y S   + ++  +V ++F  +  Q F    +P S P ++  + +++  
Sbjct: 17  ITIPLIPTTIVVYTSFREVDQNYLKVMQTFGATRSQTFKEAILPASFPTIISTLKVNVGL 76

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            W  V+  E +V         G+G  I    +  +   +L ++L +     L  +++
Sbjct: 77  SWVGVIVGEFLV------SAKGLGYMIIYGFQVFNFSLVLLSLLIIAVFATLMYKIV 127


>gi|57866923|ref|YP_188536.1| phosphate ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|242242665|ref|ZP_04797110.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|57637581|gb|AAW54369.1| phosphate ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|242233801|gb|EES36113.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|319401328|gb|EFV89539.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           epidermidis FRI909]
          Length = 301

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           A+      ++   +  +  +P + F       F+      +  + LAA   +    +  +
Sbjct: 113 ARDNIFTQIVKVSISNLAGVPSIVFGLLGYTLFVGA--AGLGNSVLAAALTMSLLILPVI 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             +  +++  +P  + E S     + WQ    + +P ++PG++   ++S+S  
Sbjct: 171 IVASQEAIRAVPSSVREASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRA 223



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 422 AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
              LA  P+ VF      +   +    N  L  +L M       I+        A P+  
Sbjct: 126 ISNLAGVPSIVFGLLGYTLFVGAAGLGNSVLAAALTMSLLILPVIIVASQEAIRAVPSSV 185

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E +       W+  R ++LP   P  +TG I +   A   +    +     I L T 
Sbjct: 186 REASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRALGETAPLVMIGIPTILLATP 243


>gi|15887770|ref|NP_353451.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15155340|gb|AAK86236.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 440

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              M+I L+        A       A   RL  ++   ++ + ++P + +    +  F+N
Sbjct: 226 FYMMLIVLVLALPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLSVFIN 285

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    A L     +    +  +  +   +L  +P  +   +     S  Q  ++  +
Sbjct: 286 -FMGFPRSASLVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQTIFHHVL 344

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ ++  
Sbjct: 345 PLAMPGILTGTIIGLAHA 362



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     +++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALIGSFYMMLIVLVLALPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +S    +   P   +L   L++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLSVFINFMGFPRSASLVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQT 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 IFHHVLPLAMPGILTGTIIGLAHA 362


>gi|57639953|ref|YP_182431.1| ABC-type sulfate transport system, permease component [Thermococcus
           kodakarensis KOD1]
 gi|74503016|sp|Q5JEB3|WTPB_PYRKO RecName: Full=Molybdate/tungstate transport system permease protein
           wtpB
 gi|57158277|dbj|BAD84207.1| ABC-type sulfate transport system, permease component [Thermococcus
           kodakarensis KOD1]
          Length = 247

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 69/187 (36%), Gaps = 3/187 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L   +  +I+LLF      + A+    G      +  +  +PI+   +   +  +  +
Sbjct: 55  SLLTATATALIALLFGVPLGYVLARKDFPGK---SAVQALVDVPIVIPHSVVGIMLLVTF 111

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              ++ +    + A+          +       +   LE V+R+   S W+ F  + +P 
Sbjct: 112 SNSILDSYKGIVAAMLFVSAPFTINAARDGFLAVDEKLEAVARTLGASRWRAFLSISLPM 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           + P +    +M+ +     V A  ++        +  +  +    ++    +A++   L+
Sbjct: 172 AFPSIASGAIMTWARAISEVGAILIVAYYPKTAQVLILEYFNNYGLRASRPIAVIMVSLS 231

Query: 248 MLGVIFL 254
           +   + L
Sbjct: 232 LGIFVIL 238



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 75/227 (33%), Gaps = 1/227 (0%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L  F    +      I  +    +          YVI     ++       +IA +  +
Sbjct: 12  ALGTFLIAYIAVPIAVIFLKQASDVEMLVKTLHDPYVIEAIRNSLLTATATALIALLFGV 71

Query: 403 PVGIWIGFRPHISS-KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+G  +  +       +Q    +    P +V   +++   S   L+    +   M+F + 
Sbjct: 72  PLGYVLARKDFPGKSAVQALVDVPIVIPHSVVGIMLLVTFSNSILDSYKGIVAAMLFVSA 131

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            + +     G  A     + VA +   + WR +  I LP  FP   +GAI     A +  
Sbjct: 132 PFTINAARDGFLAVDEKLEAVARTLGASRWRAFLSISLPMAFPSIASGAIMTWARAISEV 191

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               + ++     +   L  +            V++  L +  FV+ 
Sbjct: 192 GAILIVAYYPKTAQVLILEYFNNYGLRASRPIAVIMVSLSLGIFVIL 238


>gi|85703114|ref|ZP_01034218.1| ABC phosphate transporter, inner membrane subunit PstA [Roseovarius
           sp. 217]
 gi|85672042|gb|EAQ26899.1| ABC phosphate transporter, inner membrane subunit PstA [Roseovarius
           sp. 217]
          Length = 449

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 75  AMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
            M+I L+        A+        K+R   ++ V I + + ++P + F    +  F+N+
Sbjct: 233 MMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISN-LAAVPSIVFGILGLAIFINM 291

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
             G    A +     +    +  +  +   +L ++P  + + +     S  Q  ++  +P
Sbjct: 292 V-GLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLP 350

Query: 187 FSMPGLVWNMMMSMSGG 203
            +MPG++   ++ ++  
Sbjct: 351 LAMPGILTGAIIGLAQA 367



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 73/205 (35%), Gaps = 25/205 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           + +++I  ++ +P+G+               +  I+     LAA P+ VF  L ++    
Sbjct: 231 IYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGILGLAIFIN 290

Query: 444 YHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
               P        L++   T   I+    A   + P   ++ A     +  +   + +LP
Sbjct: 291 MVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLP 350

Query: 501 GIFPYYVTGAITACGGAWNA---SIVSEVASWGHIHLRTTGLGAY---------IAESTE 548
              P  +TGAI     A       ++  + ++   +      G +         +   T+
Sbjct: 351 LAMPGILTGAIIGLAQALGETAPLLLIGMVAFVREYPGGPPEGFFDPAAALPVQVYNWTQ 410

Query: 549 KGS---FPEVVLGVLIMCCFVLALN 570
           +G           ++++  F++ +N
Sbjct: 411 RGDPAFVERASGAIIVLLVFLVLMN 435


>gi|260439237|ref|ZP_05793053.1| phosphate ABC transporter, permease protein PstA [Butyrivibrio
           crossotus DSM 2876]
 gi|292808252|gb|EFF67457.1| phosphate ABC transporter, permease protein PstA [Butyrivibrio
           crossotus DSM 2876]
          Length = 285

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 72/189 (38%), Gaps = 15/189 (7%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            +    L+  +  IL++G+      + I      + +V  LP     + +  L    +SL
Sbjct: 24  GITVVALLYVLFYILVNGVPALFTSKGIFSTKYNSENVSLLP-----SLINTLILTAVSL 78

Query: 81  LFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
                    AA        K      V+  + + +  IP + +  F +++F+        
Sbjct: 79  AIAIPLGIGAAIYLSEYAKKRNFFVRVIELMSETLSGIPSIIYGLFGMIFFVVFLKWDYS 138

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               AA  AI    +  +  +  ++L  +P    E S +      +  + + +P ++PG+
Sbjct: 139 LMAGAATAAIM--VLPTILSTTKEALDAVPDSYREGSFALGTGKLRTIFKVVLPAAVPGI 196

Query: 193 VWNMMMSMS 201
           +  +++++ 
Sbjct: 197 LSGIILAIG 205



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 29/259 (11%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLI 394
           +  ++ +     V  +   + +  +  +   FT + +    +         ++   ++L 
Sbjct: 15  LRGLMYLAAGITVVALLYVLFYILVNGVPALFTSKGIFSTKYNSENVSLLPSLINTLILT 74

Query: 395 IIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF-----FPLVVSCV 441
            ++  I IP+GI            R      I+  ++ L+  P+ ++        VV   
Sbjct: 75  AVSLAIAIPLGIGAAIYLSEYAKKRNFFVRVIELMSETLSGIPSIIYGLFGMIFFVVFLK 134

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             Y L      + +M+  T   IL        A P+ ++E + +      R    ++LP 
Sbjct: 135 WDYSLMAGAATAAIMVLPT---ILSTTKEALDAVPDSYREGSFALGTGKLRTIFKVVLPA 191

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA--------YIAESTEKGSFP 553
             P  ++G I A G     +      S       T GL +            S+E     
Sbjct: 192 AVPGILSGIILAIGRIVGETAALLYTSGTATRGLTKGLMSSGRTLAVHMYTISSEGFHTK 251

Query: 554 EVVLGVLIMCCFVLALNRF 572
           +     +I+  FV  +N  
Sbjct: 252 QTFATAVILLIFVFIINTL 270


>gi|222082989|ref|YP_002542354.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221727668|gb|ACM30757.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 281

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++LL         A+ +     +  ++ I +  P L FL    + F
Sbjct: 77  YFWNSILVTGAATLLALLIGVPAGYGIARLKAERSAV--VIMIARMTPGLSFLIPLFLLF 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L    ++G     I       V  + + M       P +LEE +     + WQ F  +
Sbjct: 135 QWL---NLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLV 191

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V   ++S+   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 192 ALPIAKPGIVVAFILSVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 249

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + +      + ++ 
Sbjct: 250 AALIVTLPVLVLTIFAQKQIVA 271



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 5/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 81  SILVTGAATLLALLIGVPAGYGIARLKAERSAV--VIMIARMTPGLSFLIPLFLLFQWLN 138

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   LW  +++       I+  ++ G     P + +E AS    T W+ +R + LP   P
Sbjct: 139 LLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIAKP 198

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I +   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 199 GIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 256

Query: 565 FVLALNRF 572
            VL L  F
Sbjct: 257 PVLVLTIF 264


>gi|239637077|ref|ZP_04678071.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           warneri L37603]
 gi|239597427|gb|EEQ79930.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           warneri L37603]
          Length = 308

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 85/217 (39%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+ LF       AA       + ++  ++ PIL+I+  IP + F    LTF      +
Sbjct: 92  TIIAALFAVPIGLGAAIYLSEYATDKVRRIIKPILEILAGIPTIVFGFFALTFVTPILRS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P       ++    +    +  +T     ++ ++P  + E +     +  +    + +
Sbjct: 152 VFPQLGSFNSISPGLVVGVMIIPLITSMSEDAMASVPNKIREGALGLGATKLEVAIKVVL 211

Query: 186 PFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPG-----IGSYIALAIKEQDL 238
           P +  G++ ++++++S   G   +V+          + L G      G  + +A  +   
Sbjct: 212 PAAASGILASIVLAVSRAIGETMIVSLAAGSTPTASLNLTGSIQTMTGYIVQVATGDATF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L    +  W S +FR E 
Sbjct: 272 GSDVYYSIYAVGFTLFIFTLAMNLLSQWISKRFREEY 308



 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 17/186 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQ 423
           +       Y IW   I   ++    IIA++  +P+G+             +   I+P  +
Sbjct: 71  NPFSAKPSYGIWALIIGTLKI---TIIAALFAVPIGLGAAIYLSEYATDKVRRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S         ++   L++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPILRSVFPQLGSFNSISPGLVVGVMIIPLITSMSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T       ++LP      +   + A   A   +++  +A+       
Sbjct: 188 PNKIREGALGLGATKLEVAIKVVLPAAASGILASIVLAVSRAIGETMIVSLAAGSTPTAS 247

Query: 536 TTGLGA 541
               G+
Sbjct: 248 LNLTGS 253


>gi|78779111|ref|YP_397223.1| phosphate ABC transporter permease [Prochlorococcus marinus str.
           MIT 9312]
 gi|78712610|gb|ABB49787.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 315

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 96/270 (35%), Gaps = 34/270 (12%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++++GII ++     E+     +  +V    +       A       L    +SLL 
Sbjct: 34  FVAIILLGIILVVFFQSFESFSRYGLKFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLI 93

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYF--------- 123
           T       A         + +  ++   ++++ +IP +    +  F +  F         
Sbjct: 94  TIPLGVGTAIFITEDFVPKVVREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLH 153

Query: 124 -----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
                + L+  +  G        I    +  +  S+   SL  +P+ L   +     S W
Sbjct: 154 NFFGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRW 213

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
           +  + + +P ++ G++  +++++       +A  MI+            PG  I S +A 
Sbjct: 214 KTIFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLAN 273

Query: 232 AIKEQD---LLAILYAMLTMLGVIFLYDQL 258
              E D   + ++ YA   ++ +  + +  
Sbjct: 274 QFGEADGSQVSSLFYAAFVLMILSLVVNIF 303



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 88/278 (31%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +    +V       ++   G      +  + +   +     ++  +V   ++ +I I
Sbjct: 36  AIILLGIILVVFFQSFESFSRYGLKFLVTSEWNPVKDEYGAFTAIYGTLVTSFLSLLITI 95

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYH-- 445
           P+G+              +   I  F +LLAA P+ V          P   +   + H  
Sbjct: 96  PLGVGTAIFITEDFVPKVVREIIGSFVELLAAIPSVVLGLWAIFVMEPFFRAFFVFLHNF 155

Query: 446 -----------LNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
                         N  L++L++      I+ ++     +  P   +  A     + W+ 
Sbjct: 156 FGWIPLFSTEPTGRNSLLAILILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKT 215

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEK 549
              +ILP      + G + A G A   ++   +          + L  G  I    + + 
Sbjct: 216 IFSVILPAALSGIMAGVLLALGRAMGETMAVTMIIGNSNAFSWSLLSPGYTISSMLANQF 275

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L    FVL +   + +    +  +   L
Sbjct: 276 GEADGSQVSSLFYAAFVLMILSLVVNIFAQWLVKKFSL 313


>gi|260461623|ref|ZP_05809870.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259032693|gb|EEW33957.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 567

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 80/537 (14%), Positives = 167/537 (31%), Gaps = 78/537 (14%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----------DVHSLPQYASRTTLRM 72
           +A V+V+  +  +L  ++E   P   +  V I              H+L      T L +
Sbjct: 19  VAVVIVLLSLLPMLRLVKEIVAPGGTMSTVAIEAGLRSPATWIATWHTLVVGIGGTLLAV 78

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL------TFTVVYFMNL 126
           LS  ++++L +     +  +S  +   ++P++ I   +  L +L      +  +  F   
Sbjct: 79  LSGTLVAVLVSLT--DIRGRSALVLCYVMPLM-IAPQVTALAWLQLFGPASPFLKLFGAA 135

Query: 127 YP--GKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            P   K      + I  +   Q   + F  +   L  +PR+L E +R+     +     +
Sbjct: 136 PPLGTKNPLYSTSGIILLLGVQYGPLVFLLVRAGLRKLPRELVEAARAGGAGWFTVLVTI 195

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P   P ++    ++                  + +   GI +++ +      L  ++Y
Sbjct: 196 VLPLMTPSIMAAAALAF----------------VSCVGNFGIPAFLGIPANYLVLPTLIY 239

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
             L   G   L                      G     S ++ +      L     S  
Sbjct: 240 QKLAGGGPAVL----------------------GETAFLSVLIGVIAMAGILAQELMSRR 277

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
             +   S ++      LG  R         L        +  +    +V G  I +  ++
Sbjct: 278 RDYRISSTSLSAEPYELGCWRPAVQAGMWLLIVLVLFLPLFGLMLTSLVPGYGIALTAKT 337

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFA 422
                  F   +          + +  +     A ++ +P+G  I +        +    
Sbjct: 338 ATLDNYRFVLFEHDAASRAFFNSFWLSIATAFFAVLVAVPIGYLIAWGKQRWVRLLNLSV 397

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN------------VIA 470
           +L  A P  V     +           + L+ + ++ T W IL+              I+
Sbjct: 398 ELPYALPGVVLAIASLLLFLR-----PIPLTGIQLYNTVWIILYAYLARFLVLALRPTIS 452

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           G        +E A       +   R II P + P  + G +     A +   VS + 
Sbjct: 453 GYHQIDRALEEAAQVAGAGLFTRMRTIIFPLVAPAAIAGGLLIFMTALSELTVSALL 509


>gi|261367829|ref|ZP_05980712.1| D-methionine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282570631|gb|EFB76166.1| D-methionine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 232

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAA---------KSRRLGMVLVPILDIMQSI 110
           ++P     T      A +++L+                     R +  VL   +++++S+
Sbjct: 19  TIPFETWETIWSTAVATLLALVIGLPLGVCLVTGEQGGVRPLPRWVMSVLNAFINLLRSV 78

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P L  +   +     +    +     A+I  +  +    +   +  S+  +   + E ++
Sbjct: 79  PFLILMIIVIPLSRLIVGTSI--GTPASIVPLVIASFPFVARLVETSIREVDAGVIEAAQ 136

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           S   +  Q    + +P SMP L+ N+ ++
Sbjct: 137 SMGATPLQIITKVMIPESMPSLISNVTIA 165



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 19/196 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP---HISSKIQPFAQLLAAFPANVFFPL 436
           T++   V  ++A +I +P+G+ +      G RP    + S +  F  LL + P  +   +
Sbjct: 27  TIWSTAVATLLALVIGLPLGVCLVTGEQGGVRPLPRWVMSVLNAFINLLRSVPFLILMII 86

Query: 437 VVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+     +    +     +  L+I  +  ++   V            E A S   T  + 
Sbjct: 87  VIPLSRLIVGTSIGTPASIVPLVI-ASFPFVARLVETSIREVDAGVIEAAQSMGATPLQI 145

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  ++    A         ++ +   G +       G Y      + +  
Sbjct: 146 ITKVMIPESMPSLISNVTIATTTIMGYGAMAGIIGGGGLGKIAINYGYY------RFNVV 199

Query: 554 EVVLGVLIMCCFVLAL 569
             +   +++   V  L
Sbjct: 200 LEIFATVLLVILVQIL 215


>gi|332971735|gb|EGK10683.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Desmospora sp. 8437]
          Length = 218

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLA 426
           D   V      T + V +     ++  IP+G+ +           P +   +     +  
Sbjct: 6   DWPSVWQATGETAYMVGISTFFTALFGIPLGVLLVVTERGSLWDLPWLQKVVSGIVNIFR 65

Query: 427 AFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           A P        FPL    V    L P      L+     +Y    V            E 
Sbjct: 66  AVPFIVLVLFLFPLAQFLVG-TSLGPTAATIPLIAGAAPFY-ARMVETALREVDKGVVEA 123

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           A S   T  +  R +++P   P  ++G    C    + S ++
Sbjct: 124 ARSMGTTRLQVVRRVLIPEATPALISGLTVTCVTLISFSAMA 165



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDI 106
            +D  S+ Q    T   +  +   + LF      L   +          L  V+  I++I
Sbjct: 4   EVDWPSVWQATGETAYMVGISTFFTALFGIPLGVLLVVTERGSLWDLPWLQKVVSGIVNI 63

Query: 107 MQSIP--ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            +++P  +L    F +  F+    G  +G   A I  I  +  +     +  +L  + + 
Sbjct: 64  FRAVPFIVLVLFLFPLAQFLV---GTSLGPTAATIPLIAGAAPFY-ARMVETALREVDKG 119

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           + E +RS   +  Q    + +P + P L+  + ++
Sbjct: 120 VVEAARSMGTTRLQVVRRVLIPEATPALISGLTVT 154


>gi|308068352|ref|YP_003869957.1| ABC transporter permease yqgI [Paenibacillus polymyxa E681]
 gi|310641206|ref|YP_003945964.1| phosphate abc transporter, permease psta [Paenibacillus polymyxa
           SC2]
 gi|305857631|gb|ADM69419.1| Probable ABC transporter permease protein yqgI [Paenibacillus
           polymyxa E681]
 gi|309246156|gb|ADO55723.1| Phosphate ABC transporter, permease PstA [Paenibacillus polymyxa
           SC2]
          Length = 298

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 88/208 (42%), Gaps = 8/208 (3%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-LPQYASRTTLRMLSAMV 77
            F L    L++G++  +L     + +  D +   P TL     +      +   ++  ++
Sbjct: 16  FFALFIVALLVGLLGFILARGV-SHISFDFLTSAPQTLRAGGGIGPQLFNSVFLLILTLI 74

Query: 78  ISLLFTFVYATLAAKSRRLGMV---LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           I++   +      A+  + G +   +  +++++ S P +    F ++  +N +       
Sbjct: 75  ITIPIGWGAGIYMAQYAKPGKITDFIRLVVEVLSSFPSIVIGLFGLLLIVNTFDFGFSLL 134

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A   A+F   +  M  +  Q+   +P++ +E   +  LS W+    + +P ++P L+ 
Sbjct: 135 SGALALAVFNLPL--MVRTTEQAFRAVPKEQKEAGLALGLSKWKIITSILLPAALPSLIT 192

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             +++ +G  F   A+ +   G +  PL
Sbjct: 193 GTILA-AGRIFGEAAALLFTAGMSTPPL 219



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 18/190 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIIIASI 399
           +  +     + G  +      I +       Q +     +G     ++F +++ +II   
Sbjct: 19  LFIVALLVGLLGFILARGVSHISFDFLTSAPQTLRAGGGIGPQLFNSVFLLILTLIITIP 78

Query: 400 IWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456
           I    GI++        I+  I+   ++L++FP+     +V+       +         +
Sbjct: 79  IGWGAGIYMAQYAKPGKITDFIRLVVEVLSSFPS-----IVIGLFGLLLIVNTFDFGFSL 133

Query: 457 IFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + G     +FN             A P + KE   +  ++ W+    I+LP   P  +TG
Sbjct: 134 LSGALALAVFNLPLMVRTTEQAFRAVPKEQKEAGLALGLSKWKIITSILLPAALPSLITG 193

Query: 510 AITACGGAWN 519
            I A G  + 
Sbjct: 194 TILAAGRIFG 203


>gi|302551748|ref|ZP_07304090.1| permease membrane component [Streptomyces viridochromogenes DSM
           40736]
 gi|302469366|gb|EFL32459.1| permease membrane component [Streptomyces viridochromogenes DSM
           40736]
          Length = 215

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 64/201 (31%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L   A +    +   MV++ L   +   +  +S   G +       + ++P L  +  
Sbjct: 12  QQLLTDAYQHASVVFQCMVVATLLGVLIGVVTYRSEWAGNLATTTTATILTVPALALIGL 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +       P          + A+    +  +  +    L  +   L + +    +S   
Sbjct: 72  LIPVVGLGVPP--------TVIALTLYGLLPVVRNAIVGLRGVDPSLVDAADGIGMSRPV 123

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           +   + +P + P ++  + ++ +     + A      G      PG+G+ I   +     
Sbjct: 124 RLLRVELPLAWPPILTGIRVA-TQMLMGIAAIAAYASG------PGLGNIIFRGLASLGS 176

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
              L  +L     I +   L 
Sbjct: 177 ANALNQVLAGTLGIVVLALLF 197



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++A+++ + +G+         +        +   PA     L++  V        
Sbjct: 25  VFQCMVVATLLGVLIGVVTYRSEWAGNLATTTTATILTVPALALIGLLIPVVGLGVPPTV 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L+L  +      ++ N I G         + A    ++       + LP  +P  +TG
Sbjct: 85  IALTLYGLL----PVVRNAIVGLRGVDPSLVDAADGIGMSRPVRLLRVELPLAWPPILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCF 565
              A       + ++  AS         GLG  I    A      +  +V+ G L +   
Sbjct: 141 IRVATQMLMGIAAIAAYASG-------PGLGNIIFRGLASLGSANALNQVLAGTLGIVVL 193

Query: 566 VLALN 570
            L  +
Sbjct: 194 ALLFD 198


>gi|261408695|ref|YP_003244936.1| phosphate ABC transporter inner membrane subunit PstA
           [Paenibacillus sp. Y412MC10]
 gi|329929177|ref|ZP_08282963.1| phosphate ABC transporter, permease protein PstA [Paenibacillus sp.
           HGF5]
 gi|261285158|gb|ACX67129.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus sp. Y412MC10]
 gi|328936854|gb|EGG33289.1| phosphate ABC transporter, permease protein PstA [Paenibacillus sp.
           HGF5]
          Length = 291

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 71/186 (38%), Gaps = 9/186 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++++ +I  ++        P    +      D   L      T   +L    +S + 
Sbjct: 32  IGILVLMALIVTIVMDGVHRLSPELFTNFPSRIADKAGLKSPIVGTIYLLLLMAPLSFVL 91

Query: 83  TFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
               A      A +SR +  ++   +  +  +P + +    +  F+    G  +G  L +
Sbjct: 92  GVGAAIFLEEYAGRSRWV-RLIQLNISTLAGVPSIIYGILGLAIFV---RGMNLGRSLLS 147

Query: 139 IFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
                T  V  +     Q +L  +P++  + S +   + WQ      +P ++PG++  ++
Sbjct: 148 GVLTMTLLVLPIIIVAAQEALRAVPKNRRDASYALGATKWQTVSSAVLPSAIPGIMTGVI 207

Query: 198 MSMSGG 203
           +++S  
Sbjct: 208 LALSRA 213



 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI----GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T++ ++++  ++ ++ +   I++    G    +   IQ     LA  P+ ++  L ++  
Sbjct: 77  TIYLLLLMAPLSFVLGVGAAIFLEEYAGRSRWV-RLIQLNISTLAGVPSIIYGILGLAIF 135

Query: 442 SYY-HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIIL 499
               +L  +L   +L +      I+         A P + ++ + +   T W+     +L
Sbjct: 136 VRGMNLGRSLLSGVLTMTLLVLPIIIVAAQEALRAVPKNRRDASYALGATKWQTVSSAVL 195

Query: 500 PGIFPYYVTGAITACGGA 517
           P   P  +TG I A   A
Sbjct: 196 PSAIPGIMTGVILALSRA 213


>gi|315660092|ref|ZP_07912950.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|315494993|gb|EFU83330.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 219

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           ++D     Q    T   +  +++I  L       L   +RR        +  +L P+++I
Sbjct: 5   SIDSSQQLQALYETLYMVTISLIIGALIGIPLGVLLVITRRHGIWPNTVIHQLLNPMINI 64

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++SIP    L   +V F  L  G  IG   AAI  +       +   +  SL  +   + 
Sbjct: 65  LRSIP-FIILLIAIVPFTKLLVGTSIGTT-AAIVPLTVYVASYIARLVENSLLEVDDGII 122

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           E +++   S  Q   Y  +P ++  LV  +  ++ G
Sbjct: 123 EAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLA 426
           D    +     T++ V + +II ++I IP+G+ +             I   + P   +L 
Sbjct: 7   DSSQQLQALYETLYMVTISLIIGALIGIPLGVLLVITRRHGIWPNTVIHQLLNPMINILR 66

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVA 483
           + P  +   + +   +   +  ++  +  ++  T +   YI   V        +   E A
Sbjct: 67  SIPFIILL-IAIVPFTKLLVGTSIGTTAAIVPLTVYVASYIARLVENSLLEVDDGIIEAA 125

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
            +   +  +  RY ++P      V    TA  G
Sbjct: 126 KAMGASPLQIIRYFLIPEALGSLVLAITTAIIG 158


>gi|225022213|ref|ZP_03711405.1| hypothetical protein CORMATOL_02247 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680538|ref|ZP_07403346.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
 gi|224945146|gb|EEG26355.1| hypothetical protein CORMATOL_02247 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660069|gb|EFM49568.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 245

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 6/146 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V I++  II IP+GI +  +P   +++ +   A L  A PA     L+   + +     
Sbjct: 60  AVSIVVVLIIAIPLGILLTRKPLRWLTTPVMSLANLGQAAPAIGLVVLIAFWLGFGFTTA 119

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L L         +L N + G  A      E      ++  +    I LP   P  + 
Sbjct: 120 AVALILYAFL----PVLKNTMVGLDAVDPKLVEAGRGMGMSAVQVLFQIELPLAVPIMLA 175

Query: 509 GAITACGGAWNASIVSEVASWGHIHL 534
           G  TA       + ++     G + +
Sbjct: 176 GIRTALVLLVGTATLATFVDGGGLGI 201



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 10/129 (7%)

Query: 74  SAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
            ++V+ L+       L  +   R L   ++ + ++ Q+ P +G +     +    +    
Sbjct: 61  VSIVVVLIIAIPLGILLTRKPLRWLTTPVMSLANLGQAAPAIGLVVLIAFWLGFGFT--- 117

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A  A+       +  +    L  +   L E  R   +S  Q  + + +P ++P 
Sbjct: 118 -----TAAVALILYAFLPVLKNTMVGLDAVDPKLVEAGRGMGMSAVQVLFQIELPLAVPI 172

Query: 192 LVWNMMMSM 200
           ++  +  ++
Sbjct: 173 MLAGIRTAL 181


>gi|203284136|ref|YP_002221876.1| phosphate ABC transporter, permease protein [Borrelia duttonii Ly]
 gi|201083579|gb|ACH93170.1| phosphate ABC transporter, permease protein [Borrelia duttonii Ly]
          Length = 302

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 10/163 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +  A+ I L F      L+ K++      L  I++++  IP + +  F   + 
Sbjct: 82  ALTTFFSVAIALPIGLGFAI---YLSEKTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFI 138

Query: 124 MNLYPGKVI-----GAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
            +L     I     G  L     + +  +     S+ Y SL  +P+  +  S +   + W
Sbjct: 139 SSLIKNTFIREDNLGYNLITSIIVLSIMILPTIISVSYTSLKTVPKSYKLASLALAATDW 198

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           Q  + + +P +  G++  +++++       +A  M+  G  + 
Sbjct: 199 QTIYKVMIPSASKGILAGVILAIGRAIGETIAVLMVGGGSPLF 241



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 20/174 (11%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH----ISSKIQPFAQLLAA 427
           +Y  + ++I     T F V + + I       +G  I             +Q   +LLA 
Sbjct: 71  SYGILSFIINSALTTFFSVAIALPIG------LGFAIYLSEKTKGIYQKTLQTIIELLAG 124

Query: 428 FPANVFFPLVVSCVSYY---------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
            P+ V+     + +S           +L  NL  S++++       + +V        P 
Sbjct: 125 IPSVVYGFFGSTFISSLIKNTFIREDNLGYNLITSIIVLSIMILPTIISVSYTSLKTVPK 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +K  + +   T W+    +++P      + G I A G A   +I   +   G 
Sbjct: 185 SYKLASLALAATDWQTIYKVMIPSASKGILAGVILAIGRAIGETIAVLMVGGGS 238


>gi|254440483|ref|ZP_05053977.1| phosphate ABC transporter, permease protein PstA [Octadecabacter
           antarcticus 307]
 gi|198255929|gb|EDY80243.1| phosphate ABC transporter, permease protein PstA [Octadecabacter
           antarcticus 307]
          Length = 437

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 55/150 (36%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   M   + ++L      +      A+   +  V+   +  + ++P +
Sbjct: 204 EAAGLGVAILGSLYMMAVVLCLALPIGVAASIYLEEFARKSWITDVIEVNIANLAAVPSI 263

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N +      + L     +    +  +  S   SL +IP  + + +    
Sbjct: 264 VYGILGLAIFIN-FAELNQSSPLVGGLVLTLMTLPTIIISTRASLKSIPPSIRDAALGVG 322

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P + PG++   ++ ++  
Sbjct: 323 ASKMQSVFHHVLPLAAPGILTGTIIGLAQA 352



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 6/233 (2%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
              F RFI  +     +    N+    R  G  +         L  N   + ++      
Sbjct: 120 GATFRRFILANPDAAGTTFQMNLLTNGRIDGYFKGRVTAQTALLDKNVTPAQLILADRLA 179

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-- 408
               +     W             +   +      +++ + V++ +A  I +   I++  
Sbjct: 180 DQGTLVQRFNWAFFTNPDASDQRPEAAGLGVAILGSLYMMAVVLCLALPIGVAASIYLEE 239

Query: 409 -GFRPHISSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLS--LLMIFGTQWYI 464
              +  I+  I+     LAA P+ V+  L +   +++  LN +  L   L++   T   I
Sbjct: 240 FARKSWITDVIEVNIANLAAVPSIVYGILGLAIFINFAELNQSSPLVGGLVLTLMTLPTI 299

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           + +  A   + P   ++ A     +  +   + +LP   P  +TG I     A
Sbjct: 300 IISTRASLKSIPPSIRDAALGVGASKMQSVFHHVLPLAAPGILTGTIIGLAQA 352


>gi|325569755|ref|ZP_08145779.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157060|gb|EGC69226.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 294

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 83/220 (37%), Gaps = 9/220 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYA 65
              S +I   +   +A ++V+ + ++LL+ +                    +   +    
Sbjct: 3   AKRSDKIATGVLYAVAGIIVLILASLLLYILVRGVPHISWEFLTSSSKAYQEGGGIGIQL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +   +L  ++IS   +          AK   L  ++   ++I+ S+P +    F  + 
Sbjct: 63  FNSLYLLLVTIIISFPISLGAGIYLSEYAKKNWLTDIIRTSIEILSSLPSVVVGLFGFLV 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +         A     F   +  +T ++ +SL  I     E   S  LS W+    
Sbjct: 123 FVIQFGYGFSIISGALALTFFNLPL--LTRNVEESLQAIHYTQREAGLSLGLSRWETVTR 180

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + VP + PG++  +++S SG  F   A+ +   G +   L
Sbjct: 181 IIVPEATPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +    + +++  +      ++  +   +    +   V H ++          Q+   +  
Sbjct: 1   MNAKRSDKIATGVLYAVAGIIVLILASLLLYILVRGVPHISWEFLTSSSKAYQEGGGIGI 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ ++V III+  I +  GI++        ++  I+   ++L++ P+ V   F  
Sbjct: 61  QLFNSLYLLLVTIIISFPISLGAGIYLSEYAKKNWLTDIIRTSIEILSSLPSVVVGLFGF 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  + + +    +  +L + F     +  NV     A     +E   S  ++ W     
Sbjct: 121 LVFVIQFGYGFSIISGALALTFFNLPLLTRNVEESLQAIHYTQREAGLSLGLSRWETVTR 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           II+P   P  +TG I + G  + 
Sbjct: 181 IIVPEATPGILTGVILSSGRIFG 203


>gi|83720159|ref|YP_442902.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|257139119|ref|ZP_05587381.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|83653984|gb|ABC38047.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 278

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 19/171 (11%)

Query: 93  SRRLGMVLVPI----LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +RR G   +P+    + I Q+ P +  L   V                  + A+    + 
Sbjct: 104 TRRAGAEFLPVARSVVHIGQTFPPVAVLALAVPAVGFGV--------KPVLIALILYGLL 155

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S    L ++P D  + +R   +S  Q+  ++ +P + P ++  + ++       VV
Sbjct: 156 PIFESTIAGLQDVPADAVDAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VV 208

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +       + +   G+G  I   ++  +   +L   L +  +  L    L
Sbjct: 209 INLGTATIGSTVAAKGLGDVIIAGLQTSNTAFVLQGGLVVALLAVLIYDAL 259



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P D  
Sbjct: 118 VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 173

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++  +   ++ LP  FP  + G   A        +++   +     +   GLG
Sbjct: 174 DAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTATIGSTVAAKGLG 226

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G L++    + +
Sbjct: 227 DVIIAGLQTSNTAFVLQGGLVVALLAVLI 255


>gi|312194262|ref|YP_004014323.1| phosphate ABC transporter inner membrane protein PstA [Frankia sp.
           EuI1c]
 gi|311225598|gb|ADP78453.1| phosphate ABC transporter, inner membrane subunit PstA [Frankia sp.
           EuI1c]
          Length = 355

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T  ++  A +IS+ F  + A       +  RL   +   +D++  +P +    F   +++
Sbjct: 144 TLEQIGLASLISIPFGVLVAVYLVEYGRRNRLSRTISFFVDVLTGLPSIVAGLFIFAFWI 203

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L      G   A   A+    +  +  S  + L  +P +L E S +  +  W+    + 
Sbjct: 204 LLLHQHQTG--FAGSLALVILMIPTVVRSTEEMLKLVPNELREASFALGIERWRTIMKVV 261

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PG+V  +M+++S
Sbjct: 262 IPTALPGIVTGVMLAIS 278



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 9/153 (5%)

Query: 394 IIIASIIWIPVGIWI-------GFRPHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYY 444
           I +AS+I IP G+ +       G R  +S  I  F  +L   P+ V   F      +  +
Sbjct: 148 IGLASLISIPFGVLVAVYLVEYGRRNRLSRTISFFVDVLTGLPSIVAGLFIFAFWILLLH 207

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                   SL ++      ++ +        PN+ +E + +  I  WR    +++P   P
Sbjct: 208 QHQTGFAGSLALVILMIPTVVRSTEEMLKLVPNELREASFALGIERWRTIMKVVIPTALP 267

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             VTG + A       +    +  +G+ ++ + 
Sbjct: 268 GIVTGVMLAISRVAGETAPLLLTIFGNDYINSN 300


>gi|261408696|ref|YP_003244937.1| phosphate ABC transporter inner membrane subunit PstC
           [Paenibacillus sp. Y412MC10]
 gi|261285159|gb|ACX67130.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus sp. Y412MC10]
          Length = 310

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 103/290 (35%), Gaps = 24/290 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------ 62
             IS +I P +  L A + V   I I+   +QE+ +    V +          P      
Sbjct: 21  TRISDKIIPILLGLCAMLSVFTTIGIVYTLLQESVIFFKEVPVWSFLTGTTWSPILPPKE 80

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF- 115
                     L    I+++F        A         R+  V+ P+L+++  +P + + 
Sbjct: 81  FGVLPLLGGTLLITGIAIIFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVPTIVYG 140

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L     +   ++P   I   L+A   +    +  ++     ++  +P+ L   + + 
Sbjct: 141 YFALETVTPFLQKIFPDMGIFNALSAGLVVGIMVLPMISSLSEDAMRAVPKSLRHGAYAL 200

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI------- 225
             + ++    + +P ++ G+V + +++ S      +   +       + L  +       
Sbjct: 201 GATRFEVALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLESIQTMT 260

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
              + +++ +     I Y  +  +G+       L   +  W + +FR E 
Sbjct: 261 SYIVQVSMGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFREEY 310



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 91/293 (31%), Gaps = 23/293 (7%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R+   I        L LC+   V   + I +  +   V          ++        
Sbjct: 16  FRRSKTRISDKIIPILLGLCAMLSVFTTIGIVYTLLQESVIFFKEVPVWSFLTGTTWSPI 75

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFP 429
           +    +     +   +++  IA I  +P+G+             +   ++P  ++LA  P
Sbjct: 76  LPPKEFGVLPLLGGTLLITGIAIIFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVP 135

Query: 430 ANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             V+         P +        +   L   L++       I         A P   + 
Sbjct: 136 TIVYGYFALETVTPFLQKIFPDMGIFNALSAGLVVGIMVLPMISSLSEDAMRAVPKSLRH 195

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-- 539
            A +   T +     I+LP      V+  + A   A   +++  VA+     L    L  
Sbjct: 196 GAYALGATRFEVALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLES 255

Query: 540 ----GAYIAESTEKGSFPE--VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                +YI + +  G  P   +  G +      L +  FL + L  +  R  R
Sbjct: 256 IQTMTSYIVQVS-MGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFR 307


>gi|163733180|ref|ZP_02140624.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
 gi|161393715|gb|EDQ18040.1| ABC transporter, permease protein, putative [Roseobacter litoralis
           Och 149]
          Length = 546

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 72/217 (33%), Gaps = 28/217 (12%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF------- 118
            RT    L      +L  +  A + A        L+ IL ++       + +        
Sbjct: 326 MRTMFMSLVITGSCILLGYPVAWILANLPARTANLLMILVLL-----PFWTSLLVRTSAW 380

Query: 119 ------------TVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
                       T+V+   +     +     +   I A+    +  M   +Y  +  IP 
Sbjct: 381 KVMLQQQGVVNDTLVWLGIVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTIPP 440

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
                ++S   + W  FW +  P S+PG+    ++       + +  E++          
Sbjct: 441 SYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISN 500

Query: 224 GIGSYIALAIK-EQDLLAILYAMLTMLGVIFLYDQLL 259
            I  +I+ ++            ++ +L + + YD+++
Sbjct: 501 RIAYHISSSLNWGLAAALGAILLVVVLALYWAYDRIV 537



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 36/118 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  +V        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 394 LVWLGIVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATN 453

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S  
Sbjct: 454 WTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLN 511


>gi|313123610|ref|YP_004033869.1| ABC phosphate transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280173|gb|ADQ60892.1| ABC-type phosphate transport system, permease component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 291

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT-MFRV 390
           +   +R   ++   ++ +   +   + + ++  I +       D L     G     F  
Sbjct: 1   MSRAKRKDRLMTGIFYAIGWIMLAFLLYLTLTIIFDGLKGFQWDFLGATGNGIFNQFFNT 60

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCV 441
           + L+ ++ ++ +P+GI  G             +  +   + L++ P+ V   F  +   +
Sbjct: 61  IYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFIM 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L  +L +   +   I         A P ++KE +     T     R +++P 
Sbjct: 121 WTGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVLIPA 180

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             P  +TG I A G  +  +      S    ++
Sbjct: 181 AMPQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L      ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    LA    I    +  +T     ++  +P + +E S     +  +    + 
Sbjct: 120 MW--TGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|257070098|ref|YP_003156353.1| ABC-type proline/glycine betaine transporter permease
           [Brachybacterium faecium DSM 4810]
 gi|256560916|gb|ACU86763.1| ABC-type proline/glycine betaine transport system, permease
           component [Brachybacterium faecium DSM 4810]
          Length = 223

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
           S+ ++ +   +     +       +    + +++A+++ +P+G+++G            A
Sbjct: 9   SLDWLGDPLRWSGPDGIPLRTLEHLGYTALGVLVAALLAVPIGLYVGHTGRFKGLAVAAA 68

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               A P      L    +      P     +L I      +L    +   +      + 
Sbjct: 69  GAARALPTLGLVTLFALLLGIGLTAPLASFVILAIPS----LLAGAYSAIESADPATVDA 124

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           A +  +T  +    + +P   P  + G      GA    + + + +    ++   GLG Y
Sbjct: 125 ARAQGMTELQILTRVEIPLGMPLLIGGFR----GATVQVVATAMLA---AYVGNGGLGRY 177

Query: 543 IAESTEKGSFPEVVLG 558
           I +     ++P+++ G
Sbjct: 178 IFQGLGSQNYPQMIAG 193



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 62/187 (33%), Gaps = 15/187 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +P             ++++ L           + R   + V      +++P LG +T
Sbjct: 22  PDGIPLRTLEHLGYTALGVLVAALLAVPIGLYVGHTGRFKGLAVAAAGAARALPTLGLVT 81

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              +         +    + AI ++            Y ++ +      + +R+  ++  
Sbjct: 82  LFALLLGIGLTAPLASFVILAIPSLLAGA--------YSAIESADPATVDAARAQGMTEL 133

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q    + +P  MP L+        G    VVA+ M+      +   G+G YI   +  Q+
Sbjct: 134 QILTRVEIPLGMPLLIGGFR----GATVQVVATAMLAA---YVGNGGLGRYIFQGLGSQN 186

Query: 238 LLAILYA 244
              ++  
Sbjct: 187 YPQMIAG 193


>gi|84500615|ref|ZP_00998864.1| ABC polyamine/opine transporter, inner membrane subunit [Oceanicola
           batsensis HTCC2597]
 gi|84391568|gb|EAQ03900.1| ABC polyamine/opine transporter, inner membrane subunit [Oceanicola
           batsensis HTCC2597]
          Length = 538

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 12/141 (8%)

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +L +L        +     +I  +   I A+    +  M   MY  +  IP      ++S
Sbjct: 386 VLVWLGLV----ADDARLTMINNQFGTIVAMTHILLPFMILPMYSVMQTIPPSYLRAAKS 441

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              + W  FW +  P S+PG+    ++       + +  E++            G++I+ 
Sbjct: 442 LGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGNT--------GTFISN 493

Query: 232 AIKEQDLLAILYAMLTMLGVI 252
            I      ++ + +   LG I
Sbjct: 494 RIAYHISSSLNWGLAAALGSI 514



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 37/120 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 387 LVWLGLVADDARLTMINNQFGTIVAMTHILLPFMILPMYSVMQTIPPSYLRAAKSLGATN 446

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 447 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPEIVGGNTGTFISNRIAYHISSSLNWG 506


>gi|294102661|ref|YP_003554519.1| phosphate ABC transporter, inner membrane subunit PstC
           [Aminobacterium colombiense DSM 12261]
 gi|293617641|gb|ADE57795.1| phosphate ABC transporter, inner membrane subunit PstC
           [Aminobacterium colombiense DSM 12261]
          Length = 289

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 6/159 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123
           T L  L A+ ISL      + +A  S ++  +L PIL+++  +P  ILGFL   ++  + 
Sbjct: 73  TILSSLLALPISLFIAIFISEIA--SEKMRNILKPILELLGFLPSIILGFLGMVLIAPWL 130

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
              +        L A   +    +  +     ++L  +P +L   S +   + W+    +
Sbjct: 131 QANFTILSGLNLLNASILLGFLIIPIVGSLAEEALSAVPLELRNASYALGATRWETISKV 190

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
             P ++PG++   ++ +  G    +   M   G  +IP+
Sbjct: 191 VFPAALPGILSACLLGIMRGMGETMVVLMAAGGAAIIPV 229



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 63/161 (39%), Gaps = 14/161 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           V + I++S++ +P+ ++I           + + ++P  +LL   P+ +   L +  ++ +
Sbjct: 70  VAVTILSSLLALPISLFIAIFISEIASEKMRNILKPILELLGFLPSIILGFLGMVLIAPW 129

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRY 496
                  LS L +      + F +I           SA P + +  + +   T W     
Sbjct: 130 LQANFTILSGLNLLNASILLGFLIIPIVGSLAEEALSAVPLELRNASYALGATRWETISK 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++ P   P  ++  +         ++V  +A+ G   +  +
Sbjct: 190 VVFPAALPGILSACLLGIMRGMGETMVVLMAAGGAAIIPVS 230


>gi|260598589|ref|YP_003211160.1| putative osmoprotectant uptake system permease yehW [Cronobacter
           turicensis z3032]
 gi|260217766|emb|CBA32199.1| Putative osmoprotectant uptake system permease protein yehW
           [Cronobacter turicensis z3032]
          Length = 222

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 8/185 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+    +  +      Q+    + L  + +  V   + +A  + + + +   +     S 
Sbjct: 6   GLFHWLLPGLSRPVYLQESFVALTLSHLGLVAVAGAVSVACGVAVGIAVTRPWGREFRSL 65

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +  A     FP      + V  + +      + L L  +      +L   +AG SA P 
Sbjct: 66  AETLAAAGQTFPPVAVLAIAVPVMGFGREPAIVALILYGLL----PVLQGTLAGLSAVPE 121

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA----CGGAWNASIVSEVASWGHIH 533
           D KEVA    ++  +  R + LP  F   + G  T+     G A  AS V        I 
Sbjct: 122 DVKEVARGVGMSRTQILRKVELPLAFGVMLAGIRTSVIINIGTATIASTVGASTLGTPII 181

Query: 534 LRTTG 538
           +  +G
Sbjct: 182 IGLSG 186



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 75/232 (32%), Gaps = 25/232 (10%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
           G+ + LL G+         +    + L +  L   A    + +   + + +  T  +   
Sbjct: 6   GLFHWLLPGLSRPV----YLQESFVALTLSHLGLVAVAGAVSVACGVAVGIAVTRPWG-- 59

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
               R    +   +    Q+ P +  L   V                 AI A+    +  
Sbjct: 60  ----REFRSLAETLAAAGQTFPPVAVLAIAVPVMG--------FGREPAIVALILYGLLP 107

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           +       L  +P D++EV+R   +S  Q    + +P +   ++  +  S+         
Sbjct: 108 VLQGTLAGLSAVPEDVKEVARGVGMSRTQILRKVELPLAFGVMLAGIRTSVIINIGTATI 167

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           +  +           +G+ I + +   +   ++   + +     L D+L  R
Sbjct: 168 ASTVGAST-------LGTPIIIGLSGFNTAYVIQGAVLVALAAVLVDRLFER 212


>gi|229198397|ref|ZP_04325103.1| ABC transporter permease protein [Bacillus cereus m1293]
 gi|228585097|gb|EEK43209.1| ABC transporter permease protein [Bacillus cereus m1293]
          Length = 288

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F   RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFFKDRIYKLLFYMAILFSIVILLILLFQIFEKGVSYLSLDFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI L F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPLSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++PR L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYQVVLPYAFPGIITGCTLAISRA 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P    
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    ++LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYQVVLPYAFPGIITGCTLAISRA 214


>gi|301059401|ref|ZP_07200323.1| phosphate ABC transporter, permease protein PstC [delta
           proteobacterium NaphS2]
 gi|300446482|gb|EFK10325.1| phosphate ABC transporter, permease protein PstC [delta
           proteobacterium NaphS2]
          Length = 303

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 14/212 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  I  F  V GV I        ++   + Y       +     +   + + +++S+
Sbjct: 30  ITTLFLIALFLFVEGVPIFKVVSVSDFVFGKYWYPTDDPAAFGIFPLIIASIAVTLVSSV 89

Query: 400 IWIPVGIWI------GFRPHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYH 445
           I IP+G+        G    +   ++P  +LLAA P+ V          P++   ++   
Sbjct: 90  ISIPLGVLTALYLAEGASAGVREWVKPIVELLAALPSVVIGFFGMVIVAPVLQEILNIPT 149

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  SL++ F +   I           P + KE + +   T W     +I P     
Sbjct: 150 GLNLFNASLMLAFMSIPTICSLSEDAIFGVPVELKEASLALGATHWETIARVIFPASISG 209

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             T  I     A   ++V  + + G   + T+
Sbjct: 210 ICTAVILGMSRAMGETMVVLMVAGGAAMIPTS 241



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 64/161 (39%), Gaps = 12/161 (7%)

Query: 73  LSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPI-----LGFLTFTVV 121
           ++  ++S + +     L A       S  +   + PI++++ ++P       G +    V
Sbjct: 81  IAVTLVSSVISIPLGVLTALYLAEGASAGVREWVKPIVELLAALPSVVIGFFGMVIVAPV 140

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L     +    A++   F S     + S   ++  +P +L+E S +   + W+   
Sbjct: 141 LQEILNIPTGLNLFNASLMLAFMSIPTICSLSE-DAIFGVPVELKEASLALGATHWETIA 199

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            +  P S+ G+   +++ MS      +   M+  G  +IP 
Sbjct: 200 RVIFPASISGICTAVILGMSRAMGETMVVLMVAGGAAMIPT 240


>gi|284045942|ref|YP_003396282.1| phosphate ABC transporter inner membrane subunit PstA [Conexibacter
           woesei DSM 14684]
 gi|283950163|gb|ADB52907.1| phosphate ABC transporter, inner membrane subunit PstA
           [Conexibacter woesei DSM 14684]
          Length = 312

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 26/213 (12%)

Query: 390 VVVLIIIASIIW--IPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           V  L +IA +++  +P+GI                +  I+   Q LA  P+ ++  L ++
Sbjct: 93  VGTLYLIAGVVFLVVPIGIGAAVYLEEYADKTRWWNRLIELNIQNLAGVPSIIYGILGLA 152

Query: 440 CVSYYHLNPNLWL---SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +    LN    L   SL +       ++        A P   +E + +   T W+  R 
Sbjct: 153 FIVRGPLNLGFILAAGSLTLALLVLPTVILASREAIRAVPPSIREGSLALGATQWQTIRR 212

Query: 497 IILPGIFPYYVTGAITACGGA------WNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
            +LP   P  +TG I A   A            +   ++        G  A         
Sbjct: 213 QVLPASIPGIITGVILAISRAIGETAPLLLVGAATFVTFNPSFFSNDGYTALPVLIFNYA 272

Query: 551 SFPE------VVLGVLIMCCFVLALNRF-LWHP 576
           + P+         GV++M   +LA+N F +W  
Sbjct: 273 TRPQDEFRVLASAGVIVMLVVLLAMNAFAVWLR 305



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 69/194 (35%), Gaps = 7/194 (3%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +   + I +         A K+R    ++   +  +  +P + +    +  F+   P  +
Sbjct: 103 VFLVVPIGIGAAVYLEEYADKTRWWNRLIELNIQNLAGVPSIIYGILGLA-FIVRGPLNL 161

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                A    +    +  +  +  +++  +P  + E S +   + WQ      +P S+PG
Sbjct: 162 GFILAAGSLTLALLVLPTVILASREAIRAVPPSIREGSLALGATQWQTIRRQVLPASIPG 221

Query: 192 LVWNMMMSMSGG------WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           ++  +++++S           V A+  +    +     G  +   L           + +
Sbjct: 222 IITGVILAISRAIGETAPLLLVGAATFVTFNPSFFSNDGYTALPVLIFNYATRPQDEFRV 281

Query: 246 LTMLGVIFLYDQLL 259
           L   GVI +   LL
Sbjct: 282 LASAGVIVMLVVLL 295


>gi|260773286|ref|ZP_05882202.1| methionine ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
 gi|260612425|gb|EEX37628.1| methionine ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
          Length = 225

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILD 105
           I  +   L     +T   +  A +I          +   ++        +L  VL  I++
Sbjct: 10  IAFNGDLLLSATWQTIYMVAVAGIIGFAIGIPLGVILHTTKQGGLLENTKLNRVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +SIP L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSIPFLVLM-VAIIPITKMLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALIEVPSGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E +++   +  Q    + +P +MP ++ ++ +++
Sbjct: 128 VEAAQAMGATPLQIIRKVLLPEAMPTILNSVTITL 162



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 14/151 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  II   I IP+G+ +             ++  +     +  + P  V     
Sbjct: 24  TIYMVAVAGIIGFAIGIPLGVILHTTKQGGLLENTKLNRVLGAIVNIGRSIPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P+   E A +   T  + 
Sbjct: 84  IPITKMLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALIEVPSGLVEAAQAMGATPLQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            R ++LP   P  +           + S ++
Sbjct: 142 IRKVLLPEAMPTILNSVTITLVTLVSYSAMA 172


>gi|228987518|ref|ZP_04147637.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772250|gb|EEM20697.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 286

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  R++  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 9   ENMASRFLKDRVYKTLFYIAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 68

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 69  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 128

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 129 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPSSLLEASYGLGATKW 186

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 187 QTMYRIVLPYAFPGIITGCTLAISRA 212



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P+   
Sbjct: 116 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPSSLL 175

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 176 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 212


>gi|297200026|ref|ZP_06917423.1| permease membrane component [Streptomyces sviceus ATCC 29083]
 gi|197710499|gb|EDY54533.1| permease membrane component [Streptomyces sviceus ATCC 29083]
          Length = 267

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 63/183 (34%), Gaps = 12/183 (6%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           +  L F+ V  +  +L   +       D +      L    + +   +     + +    
Sbjct: 27  WRKLTFLPVFLLAVLLATWLWFAQADLDPLTENA--LSNGQVSKALWQHVQLTVISTFFV 84

Query: 80  LLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           L+          +   R++  V + + ++ Q+ P +G L   V++        +IG    
Sbjct: 85  LIIAIPLGIALTRDAFRKVSPVAMAVANMGQATPAIGLLALLVIWLGTGTKAALIGIVAY 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A+  + +        +    L      L E +R   +S       + +P ++P ++  + 
Sbjct: 145 AVLPVLS--------NTIAGLKANDPTLLEAARGIGMSPLGALTRVELPLAVPLILAGVR 196

Query: 198 MSM 200
            ++
Sbjct: 197 TAL 199



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 76/235 (32%), Gaps = 17/235 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           R    L +F   V+    +  A   +  +  N  +   V   +W     +   V+     
Sbjct: 28  RKLTFLPVFLLAVLLATWLWFAQADLDPLTENALSNGQVSKALWQH---VQLTVISTFFV 84

Query: 398 SIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            II IP+GI +       +S      A +  A PA     L+V  +        + +   
Sbjct: 85  LIIAIPLGIALTRDAFRKVSPVAMAVANMGQATPAIGLLALLVIWLGTGTKAALIGIVAY 144

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            +      +L N IAG  A      E A    ++       + LP   P  + G  TA  
Sbjct: 145 AVL----PVLSNTIAGLKANDPTLLEAARGIGMSPLGALTRVELPLAVPLILAGVRTALV 200

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                + ++     G + +        I         P ++LG ++     L ++
Sbjct: 201 LNVGTATLATFGGGGGLGV-------LITTGITNQRMPVLILGSILTVTLALLVD 248


>gi|126652195|ref|ZP_01724374.1| ABC-type phosphate transport system permease component [Bacillus
           sp. B14905]
 gi|126590927|gb|EAZ85039.1| ABC-type phosphate transport system permease component [Bacillus
           sp. B14905]
          Length = 292

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 58/150 (38%), Gaps = 5/150 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           D   +      +   M     +S++     A      AK  R+   +   +  +  +P +
Sbjct: 67  DKAGVKAALLGSLWLMAVVAPVSIILGVGTAIYLEEYAKKNRINDFIRMNISNLAGVPSI 126

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+ +    +  + LAA   +    +  +  +  +++  +P +  E S    
Sbjct: 127 VFGLLGLTIFVRMM--GLGKSVLAAGLTMSLLILPVIIVAAQEAIRAVPNEQREASYGMG 184

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + WQ    + +P ++PG++   +++MS  
Sbjct: 185 ATKWQTILRVVLPAAIPGILTGSILAMSRA 214



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 6/194 (3%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
              +       ++ L      +   V  GI + +I +++N  + + D   V      +++
Sbjct: 21  KVWKTLFFLATTFALVTLAILLYRIVTQGIDYLNIDFLMNFASRFADKAGVKAALLGSLW 80

Query: 389 RVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
            + V+  ++ I+ +   I++     +  I+  I+     LA  P+ VF    L +     
Sbjct: 81  LMAVVAPVSIILGVGTAIYLEEYAKKNRINDFIRMNISNLAGVPSIVFGLLGLTIFVRMM 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   L M       I+        A PN+ +E +     T W+    ++LP   
Sbjct: 141 GLGKSVLAAGLTMSLLILPVIIVAAQEAIRAVPNEQREASYGMGATKWQTILRVVLPAAI 200

Query: 504 PYYVTGAITACGGA 517
           P  +TG+I A   A
Sbjct: 201 PGILTGSILAMSRA 214


>gi|319953188|ref|YP_004164455.1| binding-protein-dependent transport systems inner membrane
           component [Cellulophaga algicola DSM 14237]
 gi|319421848|gb|ADV48957.1| binding-protein-dependent transport systems inner membrane
           component [Cellulophaga algicola DSM 14237]
          Length = 256

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 104/259 (40%), Gaps = 18/259 (6%)

Query: 3   LYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
           + NI  PF +     N +  L+  V + GI  +   G +        V      L    L
Sbjct: 1   MKNIFTPFENVSKNTNLVIVLVWIVALFGIWFVSSMGDRHLFPSPQQVLQGFSELYNEGL 60

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD-IMQSIPILGFLTFTV 120
             +   + L   SA++I++  +  ++ L+          VP++  + +++  L +L  T 
Sbjct: 61  VVHIGNSLLLCFSAIIIAIFISLTFSYLST---------VPVIQPVAKTLSKLRYLPLTG 111

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F       +  A    I+ +       +T S+   + ++P++  + +RS   + W+  
Sbjct: 112 ITFYLAI--LISDARTMQIWVLVVFMSTYLTTSLLSMVNSVPQEEFDHARSLGCNRWEVL 169

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           W + V   +  ++  +  +++  W  +V  E I+V        G+G  I  + K  +   
Sbjct: 170 WEVVVKGRIDYVIDVIRQNLAIVWMMLVTVESILV-----AAGGLGFLIKNSDKFMNHGR 224

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+   + +L +    D +L
Sbjct: 225 IIALQIVILALGLSIDFVL 243



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 12/156 (7%)

Query: 420 PFAQ-LLAAFPANVFFPL----VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           P  Q +        + PL        +            L++   T  Y+  ++++  ++
Sbjct: 92  PVIQPVAKTLSKLRYLPLTGITFYLAILISDARTMQIWVLVVFMST--YLTTSLLSMVNS 149

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P +  + A S     W     +++ G   Y +          W   +  E        +
Sbjct: 150 VPQEEFDHARSLGCNRWEVLWEVVVKGRIDYVIDVIRQNLAIVWMMLVTVESIL-----V 204

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              GLG  I  S +  +   ++   +++    L+++
Sbjct: 205 AAGGLGFLIKNSDKFMNHGRIIALQIVILALGLSID 240


>gi|288905348|ref|YP_003430570.1| phosphate ABC transporter permease [Streptococcus gallolyticus
           UCN34]
 gi|306831428|ref|ZP_07464586.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978335|ref|YP_004288051.1| phosphate transport system permease pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732074|emb|CBI13639.1| Putative phosphate ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|304426213|gb|EFM29327.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178263|emb|CBZ48307.1| phosphate transport system permease protein pstC [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 295

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +          AK  R    +   ++I+ S+P +    F  + F+
Sbjct: 65  SLFLLVITLIISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++   L N+     E   +  LS W+   ++ 
Sbjct: 125 VQFQYGFSIISGALALTVFN--LPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           VP ++P +V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 VPEALPSIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 15/196 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DVLYVIWLGCITMFRVVV 392
           +++  +      ++  +   +    +   + H ++                 I ++  + 
Sbjct: 8   KLATGVLYTIAGIIVAILASLLLYILVNGLPHVSWSFLTGKSSSYQAGGGIGIQLYNSLF 67

Query: 393 LIIIASIIWIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANV--FFPLVVSCVSY 443
           L++I  II IP+    GI++                 ++L++ P+ V   F  ++  V +
Sbjct: 68  LLVITLIISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFVVQF 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    +  +L +       +  NV  G     +  +E   +  ++ W    ++++P   
Sbjct: 128 QYGFSIISGALALTVFNLPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVHVVVPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  VTG + A G  + 
Sbjct: 188 PSIVTGIVLASGRIFG 203


>gi|58617270|ref|YP_196469.1| phosphate ABC transporter permease [Ehrlichia ruminantium str.
           Gardel]
 gi|58416882|emb|CAI27995.1| Phosphate transport system permease protein pstA [Ehrlichia
           ruminantium str. Gardel]
          Length = 420

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           + +  + +++I L+F              L  K+R   ++ V I + + ++P + F    
Sbjct: 200 SLIGSIFSIIICLIFAVPIGITSGICLNELIPKNRISYIIEVSITN-LAAVPSIIFGILG 258

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  ++N++      + +  +  +    + N+  +  Q+L  +P  +++ + S   S  Q 
Sbjct: 259 LAIYINIFKIPRSSSFIGGL-TLSLMMLPNLVIATKQALTAVPSSVKDAAFSLGASNMQV 317

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
             +   P ++PG++  +++S++
Sbjct: 318 IMHHSFPLALPGIMQGVILSIA 339



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++   +  III  I  +P+GI  G        +  IS  I+     LAA P+ +F  L +
Sbjct: 200 SLIGSIFSIIICLIFAVPIGITSGICLNELIPKNRISYIIEVSITNLAAVPSIIFGILGL 259

Query: 439 SC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +     + +    L +       ++       +A P+  K+ A S   +  +   
Sbjct: 260 AIYINIFKIPRSSSFIGGLTLSLMMLPNLVIATKQALTAVPSSVKDAAFSLGASNMQVIM 319

Query: 496 YIILPGIFPYYVTGAITAC 514
           +   P   P  + G I + 
Sbjct: 320 HHSFPLALPGIMQGVILSI 338


>gi|37679075|ref|NP_933684.1| ABC-type metal ion transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|320157177|ref|YP_004189556.1| methionine ABC transporter permease [Vibrio vulnificus MO6-24/O]
 gi|37197817|dbj|BAC93655.1| ABC-type metal ion transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|319932489|gb|ADV87353.1| methionine ABC transporter permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 225

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           ++L+   L     +T   +  A V+          +   +++        L  VL  I++
Sbjct: 10  LSLNTDLLLGATWQTLYMVAVAGVVGFAIGIPLGVILHTTKKGGLLENTKLNSVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P +V ++ +++
Sbjct: 128 IEAAQSMGATPLQIITKVLLPEALPTIVNSVTITL 162



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  ++   I IP+G+ +             ++S +     +  + P  V     
Sbjct: 24  TLYMVAVAGVVGFAIGIPLGVILHTTKKGGLLENTKLNSVLGAIVNIGRSVPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P    E A S   T  + 
Sbjct: 84  IPVTKLLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALLEVPTGLIEAAQSMGATPLQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  V           + S ++     G +       G +  + T      
Sbjct: 142 ITKVLLPEALPTIVNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDVT------ 195

Query: 554 EVVLGVLIMCCFVL 567
            ++   ++M   ++
Sbjct: 196 -IMAVTVVMLIVLV 208


>gi|312278355|gb|ADQ63012.1| Phosphate ABC transporter permease protein [Streptococcus
           thermophilus ND03]
          Length = 294

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 6/203 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  +I  +L           +  +         +      +   ++  ++IS+  
Sbjct: 20  IIVTILAALILYILVRGIPHISWSFLTSMSSSHKAGGGIGVQLYNSLFLLVITLIISVPL 79

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +          AK  RL   +   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  SMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPSVVVGLFGYLIFVVQFQYGFSILSGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  MT ++  SL  +     E   +  LS W+   ++ +P ++PG+V  +++S
Sbjct: 140 LTVFN--LPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICHVVIPEALPGIVTGIVLS 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPL 222
            SG  F   A+ +   G +   L
Sbjct: 198 -SGRIFGEAAALIYTAGQSAPAL 219



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
           ++      ++  + + I  + I +I   F  +            + ++  + L++I  II
Sbjct: 16  VIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKAGGGIGVQLYNSLFLLVITLII 75

Query: 401 WIPV----GIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++        +S+ ++   ++L++ P+     +VV    Y          
Sbjct: 76  SVPLSMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFQYG 130

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYY 506
             ++ G     +FN+        +  +       E   +  ++ W    ++++P   P  
Sbjct: 131 FSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICHVVIPEALPGI 190

Query: 507 VTGAITACGGAWN 519
           VTG + + G  + 
Sbjct: 191 VTGIVLSSGRIFG 203


>gi|221633804|ref|YP_002523030.1| phosphate ABC transporter permease PstC [Thermomicrobium roseum DSM
           5159]
 gi|221156740|gb|ACM05867.1| phosphate ABC transporter, permease protein PstC [Thermomicrobium
           roseum DSM 5159]
          Length = 324

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 11/167 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----L 116
           L      + + ML A+ I LL     A  A    R+  V+ P+L+I+  +P + +    L
Sbjct: 100 LTATILVSVIAMLIALPIGLLSAIGLAEYA--PDRVARVVKPVLEILAGVPTVVYGYFAL 157

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            F         P   +   L+A   +    V  +      ++  +P+ L E + +   + 
Sbjct: 158 LFVTPLLQRFIPQLEVFNALSAGLVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATK 217

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            +  W + VP S+ G+V   ++++S         E ++V   +  +P
Sbjct: 218 LEVVWRVVVPSSLSGIVAAFILAVSRA-----VGETMIVAIAMGQVP 259



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 89/271 (32%), Gaps = 26/271 (9%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
           +  + + R L   +       ++  +     ++  +       G+   +  +++ +    
Sbjct: 15  DRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGIIYTLGIETVRFFQRV 74

Query: 371 FTYQDVLYVIWLGCIT---------MFRVVVLIIIASIIWIPVGIW--IGFRP----HIS 415
                +    W    T         +   +++ +IA +I +P+G+   IG        ++
Sbjct: 75  SIVDFLTDTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLLSAIGLAEYAPDRVA 134

Query: 416 SKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             ++P  ++LA  P  V+         PL+   +    +   L   L+M       +   
Sbjct: 135 RVVKPVLEILAGVPTVVYGYFALLFVTPLLQRFIPQLEVFNALSAGLVMGIMIVPLVASL 194

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                 A P   +E A +   T       +++P      V   I A   A   +++  +A
Sbjct: 195 SEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILAVSRAVGETMIVAIA 254

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                 L    L   +A  T      +V LG
Sbjct: 255 MGQVPRLT---LNPLVAMETMTAYIVQVSLG 282


>gi|190890214|ref|YP_001976756.1| phosphate ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190695493|gb|ACE89578.1| phosphate ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 440

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  + +SL      +      A   +L  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLALSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 74/188 (39%), Gaps = 6/188 (3%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
            N++V+     +   +    A+   + +  ++  + +  +   +      +++ +++++ 
Sbjct: 175 KNRKVNDKQVTWMNQLKASGALQKQFNTGLFVNGNSSRPEAAGLGVALIGSLYLMLIVLA 234

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP---N 449
           ++  I +   I++     +  ++  I+     LAA P+ V+  L +S    +   P   +
Sbjct: 235 LSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLLGLSVFINFIGLPRSAS 294

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   A P   +  A     +  +   + +LP   P  +TG
Sbjct: 295 LVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQMVFHHVLPLAMPGILTG 354

Query: 510 AITACGGA 517
            I     A
Sbjct: 355 TIIGLAHA 362


>gi|167562716|ref|ZP_02355632.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
          Length = 250

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 18/245 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  E  +     +  P      SL          + +A     +          +    
Sbjct: 22  PGWLEPLLAPFADNSAPAIYRRASLLDLTLSHLAIVGAASAAGAIVALAAGIFVTRRAGA 81

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V   ++ I Q+ P +  L   V                  + A+    +  +  S 
Sbjct: 82  EFLPVARSVVHIGQTFPPVAVLALAVPAVGFGV--------KPVLIALILYGLLPIFEST 133

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L ++P D  + +R   +S  Q+  ++ +P + P ++  + ++       VV +    
Sbjct: 134 IAGLQDVPADAVDAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTA 186

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274
           +  + +   G+G  I   ++  +   +L   L +  +  L    L   +  W    R  R
Sbjct: 187 MIGSTVAAKGLGDVIIAGLQTSNTAFVLQGGLIVALLAVLIYDALG-VIGRWIAPVRATR 245

Query: 275 TTGIY 279
             G  
Sbjct: 246 REGGE 250



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P D  
Sbjct: 90  VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 145

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++  +   ++ LP  FP  + G   A       +++          +   GLG
Sbjct: 146 DAARGMGMSALQRLAWVELPLAFPVILNGIRLAVVINLGTAMIG-------STVAAKGLG 198

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G LI+    + +
Sbjct: 199 DVIIAGLQTSNTAFVLQGGLIVALLAVLI 227


>gi|170742610|ref|YP_001771265.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
 gi|168196884|gb|ACA18831.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium sp. 4-46]
          Length = 221

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI--------LDIMQSIPI 112
           L      T   +  A  +  LF        A S R  +   P+        ++  +S P 
Sbjct: 9   LLVATGDTLRMVAVAAGLGTLFGLPLGVFLATSGRGELFAAPLANRGLGLVVNATRSTP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   A +     +  + +   +  ++  +   L E +R+F
Sbjct: 68  FIILVVAIIPFTRLVAGTSIGTGAATVPLTVAATPF-IARLVEGAIREVDAGLVEAARAF 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PG+V  + +++
Sbjct: 127 GASPLQIVLKVLIPEALPGIVLGLTLAV 154



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 72/227 (31%), Gaps = 19/227 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFA 422
            + + +  ++     T+  V V   + ++  +P+G+++           P  +  +    
Sbjct: 1   MSPELLRLLLVATGDTLRMVAVAAGLGTLFGLPLGVFLATSGRGELFAAPLANRGLGLVV 60

Query: 423 QLLAAFPANVFFPLVVS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               + P  +    ++     V+   +        L +  T + I   V           
Sbjct: 61  NATRSTPFIILVVAIIPFTRLVAGTSIGTGAATVPLTVAATPF-IARLVEGAIREVDAGL 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A +F  +  +    +++P   P  V G   A       S +      G +       
Sbjct: 120 VEAARAFGASPLQIVLKVLIPEALPGIVLGLTLAVVSLIGFSAMVGAVGGGGLGDLGIRY 179

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           G        +   PE+++ V+ +   ++   + +   L     + LR
Sbjct: 180 GY-------QRFMPEMMVAVVAVLILLVQAVQTVGDRLARRLNKRLR 219


>gi|121535083|ref|ZP_01666900.1| phosphate ABC transporter, inner membrane subunit PstA [Thermosinus
           carboxydivorans Nor1]
 gi|121306333|gb|EAX47258.1| phosphate ABC transporter, inner membrane subunit PstA [Thermosinus
           carboxydivorans Nor1]
          Length = 311

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 55/135 (40%), Gaps = 9/135 (6%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + +S+LF+   A  A           RL  ++    + + ++P +    F ++ F+N+  
Sbjct: 96  LFLSMLFSIPIAIGAGVYLAEYAPASRLTDLIRLSTESLATVPSIVLGLFGMIIFVNMLG 155

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A   ++    V  +     +++  +P    E S +   + WQ  W + +P +
Sbjct: 156 LGFSIIGGALTLSLLNLPV--LVRVTEEAIRAVPASYREASLALGATKWQTIWKVVLPNA 213

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++  + ++    
Sbjct: 214 LPGIITGITLTAGRA 228



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 21/192 (10%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLII 395
           ++  +    ++      I ++ +  +  +F       +   G +      + + + + ++
Sbjct: 42  WLAGMVILGILATFLAYILYKGVPVLSWNFITGMPSDIRAGGGVGPQFFNSFYILFLSML 101

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            +  I I  G+++      S          + LA  P+     +V+           L L
Sbjct: 102 FSIPIAIGAGVYLAEYAPASRLTDLIRLSTESLATVPS-----IVLGLFGMIIFVNMLGL 156

Query: 453 SLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +I G     L N             A P  ++E + +   T W+    ++LP   P 
Sbjct: 157 GFSIIGGALTLSLLNLPVLVRVTEEAIRAVPASYREASLALGATKWQTIWKVVLPNALPG 216

Query: 506 YVTGAITACGGA 517
            +TG     G A
Sbjct: 217 IITGITLTAGRA 228


>gi|116333283|ref|YP_794810.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116098630|gb|ABJ63779.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 308

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 25/221 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF--- 115
           A    +      ++S +    +A   A         R   +L P+ +++  IP + +   
Sbjct: 84  ALPMIVGSFLITILSAIVATPFAIGTAVFMNEISPNRGAKILQPVTELLVGIPSVVYGFI 143

Query: 116 -LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
            L+  V     ++ G   G  L+    +F   +  +T     +L  +PR   E S +   
Sbjct: 144 GLSVVVPATRAIFGGSGFGI-LSGTCVLFVMILPTVTSMSADALKAVPRYYREASLALGA 202

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD--------------TVI 220
           + WQ  + + +  + PGL+  ++  M+  +   +A +M++                 T +
Sbjct: 203 TQWQTIYKVVLRAATPGLMTAVVFGMARAFGEALAVQMVIGNAALMPSSLVSPSATLTSV 262

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              GIG+ +  +++   L ++   +L M  V  L  +L+ R
Sbjct: 263 LTTGIGNTVMGSLQNNALWSLALVLLLMSLVFNLIIRLIGR 303



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 58/160 (36%), Gaps = 13/160 (8%)

Query: 391 VVLIIIASIIWIP--VGIWIGFRP----HISSKIQPFAQLLAAFPANVF--FPLVVSCVS 442
            ++ I+++I+  P  +G  +          +  +QP  +LL   P+ V+    L V   +
Sbjct: 92  FLITILSAIVATPFAIGTAVFMNEISPNRGAKILQPVTELLVGIPSVVYGFIGLSVVVPA 151

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNV-----IAGASAFPNDFKEVASSFHITGWRWWRYI 497
              +       +L      + ++             A P  ++E + +   T W+    +
Sbjct: 152 TRAIFGGSGFGILSGTCVLFVMILPTVTSMSADALKAVPRYYREASLALGATQWQTIYKV 211

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +L    P  +T  +     A+  ++  ++       + ++
Sbjct: 212 VLRAATPGLMTAVVFGMARAFGEALAVQMVIGNAALMPSS 251


>gi|300813032|ref|ZP_07093415.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300496002|gb|EFK31141.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|325686290|gb|EGD28329.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 291

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT-MFRV 390
           +   +R   ++   ++ +   +   + + ++  I +       D L     G     F  
Sbjct: 1   MSRAKRKDRLMTGIFYAIGWIMLAFLLYLTLTIIFDGLKGFQWDFLGAAGNGIFNQFFNT 60

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCV 441
           + L+ ++ ++ +P+GI  G             +  +   + L++ P+ V   F  +   +
Sbjct: 61  IYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFIM 120

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
                   L  +L +   +   I         A P ++KE +     T     R +++P 
Sbjct: 121 WTGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVLIPA 180

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
             P  +TG I A G  +  +      S    ++
Sbjct: 181 AMPQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L      ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    LA    I    +  +T     ++  +P + +E S     +  +    + 
Sbjct: 120 MW--TGMSWNILAGALTISILSIPLITTETNNAIRALPVEYKEGSLGLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|302523179|ref|ZP_07275521.1| maltose permease [Streptomyces sp. SPB78]
 gi|302432074|gb|EFL03890.1| maltose permease [Streptomyces sp. SPB78]
          Length = 305

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 91/241 (37%), Gaps = 10/241 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRMLSAM 76
           +    +V      L  G  +   P  I+D + ++     L+      +   T +  L   
Sbjct: 51  IALVPVVWLAFLSLGPGKDDYLHPGRILDRLTLSNYSYVLEHTKFWDWLQSTLIVALGTT 110

Query: 77  VISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ + F        ++ R      L+ +L + Q+ PI   +      F  L    +I + 
Sbjct: 111 LLGVAFAATTGYAVSRMRFPGQRPLMWVLLLTQAFPIAVLIVPMYEIFSELG---LIDSY 167

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +  I    T+ +    + +      IP +++E  R   LS +  FW L +P + PGL   
Sbjct: 168 VGVILLNCTTAIPYSAWLLKGYFDTIPFEIDEAGRIDGLSPFGTFWRLVLPLARPGLAVA 227

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIP-LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              +    W  V  +   ++ D       G+ ++++    + +L+A    ++ +   IF 
Sbjct: 228 AFYTFITAWAEVAFASTFLLDDEKYTFAVGLQTFVSEHDAQWNLMAATAVLIAVPVTIFF 287

Query: 255 Y 255
           Y
Sbjct: 288 Y 288


>gi|33240049|ref|NP_874991.1| phosphate ABC transporter permease [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237575|gb|AAP99643.1| ABC-type phosphate transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 316

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 90/276 (32%), Gaps = 29/276 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++V  I  ++ +   ++     +  +     +  +    A       L     SL+ 
Sbjct: 35  IVAIIVFAIFVVIFYQSLDSIDSYGMKFLTTSNWNPVTDEYGAFTAIYGTLVTSFASLII 94

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYFMNLYPGKV- 131
                   A         +++  ++  +++++ +IP +    +  F +  F+  +   + 
Sbjct: 95  AVPLGVGTAIFITEDIIPKKIRGLIGLMVELLAAIPSVVLGLWAIFVMEPFIRPFLNLLY 154

Query: 132 -------------IGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
                        IG  +A    I    +  +  S+   SL  +P  L E +     + W
Sbjct: 155 KMFGWIPFLSTQPIGPGIAPAILILVVMILPIITSISRDSLKQVPAKLREAAYGIGATRW 214

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPGIGSYIALAI 233
              + + +P ++ G+   +++ +       +A  MI+            PG      LA 
Sbjct: 215 TAMFNVILPAAISGITGGVLLGLGRAMGETMAVTMIIGNTNTFSWSILSPGYTISAMLAN 274

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +      + L     I +   L+      W  K
Sbjct: 275 QFGEADGSQVSSLMYAAFILMLLTLVVNIFAQWVVK 310



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 33/278 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            + +F   VV       +  S G      +  + +   +     ++  +V    + II +
Sbjct: 37  AIIVFAIFVVIFYQSLDSIDSYGMKFLTTSNWNPVTDEYGAFTAIYGTLVTSFASLIIAV 96

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANV---FFPLV--------------- 437
           P+G+              I   I    +LLAA P+ V   +   V               
Sbjct: 97  PLGVGTAIFITEDIIPKKIRGLIGLMVELLAAIPSVVLGLWAIFVMEPFIRPFLNLLYKM 156

Query: 438 ---VSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRW 493
              +  +S   + P +  ++L++      I+ ++        P   +E A     T W  
Sbjct: 157 FGWIPFLSTQPIGPGIAPAILILVVMILPIITSISRDSLKQVPAKLREAAYGIGATRWTA 216

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR----TTGLGAYIAESTEK 549
              +ILP        G +   G A   ++   +             + G       + + 
Sbjct: 217 MFNVILPAAISGITGGVLLGLGRAMGETMAVTMIIGNTNTFSWSILSPGYTISAMLANQF 276

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           G      +  L+   F+L L   + +    +  + L L
Sbjct: 277 GEADGSQVSSLMYAAFILMLLTLVVNIFAQWVVKRLSL 314


>gi|326384901|ref|ZP_08206576.1| phosphate ABC transport system, permease protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196420|gb|EGD53619.1| phosphate ABC transport system, permease protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 285

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 68/177 (38%), Gaps = 2/177 (1%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             L   +  ++  GI                   +++     +T +  + A+ +  L   
Sbjct: 30  IPLGWLVYTLIAKGIGPVLDIDWWTRSERYGGAANAIVGTLIQTAIAAVVAIPLGALVAI 89

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                A  S+RL  +   ++D++  +P +    F    +   +     G  +A    +  
Sbjct: 90  YLIEYADTSKRLVRITTFMVDVLSGVPSIVAALFIYAVWRTTFDLPRSGFAVALALVLLM 149

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +  +  S  + L  +P+DL E S +  +  W+    + +P +M G++  +M++++
Sbjct: 150 VPL--VVRSTEEMLKIVPQDLREASYALGIPKWKTILRVVLPTAMSGIITGIMLAVA 204



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 65/220 (29%), Gaps = 11/220 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P   +     +       +     +  +   +  + IG ++    +             +
Sbjct: 8   PRRNITDKVVRVAVTAAVVLAVIPLGWLVYTLIAKGIGPVL-DIDWWTRSERYGGAANAI 66

Query: 388 FRVVVLIIIASIIWIPVGIWIG--------FRPHISSKIQPFAQLLAAFPAN--VFFPLV 437
              ++   IA+++ IP+G  +             +         +L+  P+     F   
Sbjct: 67  VGTLIQTAIAAVVAIPLGALVAIYLIEYADTSKRLVRITTFMVDVLSGVPSIVAALFIYA 126

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V   ++        ++L ++      ++ +        P D +E + +  I  W+    +
Sbjct: 127 VWRTTFDLPRSGFAVALALVLLMVPLVVRSTEEMLKIVPQDLREASYALGIPKWKTILRV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +LP      +TG + A       S    +       +   
Sbjct: 187 VLPTAMSGIITGIMLAVARVMGESAPVLILVGATRSMNLN 226


>gi|319442506|ref|ZP_07991662.1| phosphate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 308

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYA-TLAAKSR--RLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T  + L   VIS+    + A  L   SR   LG V   ++DI+  +P +    F    ++
Sbjct: 93  TLTQALVTTVISVPVGVLTAVYLVEYSRGGWLGRVTTFMVDILTGVPSIVAALFVYALWI 152

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+     G   A   A+    V  +  +  + L  +P DL E + +  +  W+    + 
Sbjct: 153 ALFGFSRSG--FAVSLALVLLMVPVIVRNTEEMLRIVPMDLREAAYALGVPKWKTIVKIV 210

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++ G++  +M++++
Sbjct: 211 LPTALSGIITGIMLAVA 227



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 9/130 (6%)

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYY 444
            ++ ++I +PVG+              +         +L   P+     F   +    + 
Sbjct: 97  ALVTTVISVPVGVLTAVYLVEYSRGGWLGRVTTFMVDILTGVPSIVAALFVYALWIALFG 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  +SL ++      I+ N        P D +E A +  +  W+    I+LP    
Sbjct: 157 FSRSGFAVSLALVLLMVPVIVRNTEEMLRIVPMDLREAAYALGVPKWKTIVKIVLPTALS 216

Query: 505 YYVTGAITAC 514
             +TG + A 
Sbjct: 217 GIITGIMLAV 226


>gi|296156613|ref|ZP_06839451.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295893212|gb|EFG72992.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 276

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY------------ASRTTL 70
           LA  + + +I +L   +          + V ++LD  SL  Y               + +
Sbjct: 23  LAVYIALFVIFLLAPIVIVVMTSFTPGETVAVSLDGMSLRWYRRFLEYRPFTDSLITSLM 82

Query: 71  RMLSAMVISLLFTFV--YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
               A V ++LF          ++SR    V   +L  + ++P L     ++ Y   L  
Sbjct: 83  IAALATVFAILFAVPAALGIATSRSRLANAVTSFLLSPI-AVPPLVVGLSSLYYLSELGI 141

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + +A +       V  +  +   +  N+     E +     S WQ+F ++ +P  
Sbjct: 142 GN---SFVALLITHTCVSVPYVLRTTIAACRNLDPRFGEAASVLGASAWQRFAHVTLPLI 198

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
            PG+    + S+      +  S       T      + SY+     + D      + + M
Sbjct: 199 SPGVFAGALFSVLISLDNLGVSYFFGSATTTTLPVVMLSYLQ---NQFDPSIAAISTVQM 255

Query: 249 LGVIFLY 255
           L  I L 
Sbjct: 256 LIAIVLL 262



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 10/137 (7%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             ++    +  + A +  +P  + I      S         L         PLVV   S 
Sbjct: 78  ITSLMIAALATVFAILFAVPAALGIATSR--SRLANAVTSFL--LSPIAVPPLVVGLSSL 133

Query: 444 YHLN-PNLWLSLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           Y+L+   +  S + +  T       Y+L   IA        F E AS    + W+ + ++
Sbjct: 134 YYLSELGIGNSFVALLITHTCVSVPYVLRTTIAACRNLDPRFGEAASVLGASAWQRFAHV 193

Query: 498 ILPGIFPYYVTGAITAC 514
            LP I P    GA+ + 
Sbjct: 194 TLPLISPGVFAGALFSV 210


>gi|242373683|ref|ZP_04819257.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242348651|gb|EES40253.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 308

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 105/294 (35%), Gaps = 24/294 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VH 59
           N      S +I P I  +++ + ++  I IL   + ET      V      L        
Sbjct: 15  NAKKGGASDKIVPIILGIISAISILTTIAILFTLLTETITFFTRVPFSKFFLSGTWNPTG 74

Query: 60  SLPQYASRTTL-RMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPI 112
           S P+Y     +   L   +I+ + +      AA       S +   ++ PIL+I+  IP 
Sbjct: 75  SSPEYGIWALIIGTLKITIIATIVSVPIGLGAAIYLNEYASDKARRIIKPILEILAGIPT 134

Query: 113 LGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + F    LTF      +  P       ++    +    V  +T     ++ ++P  + E 
Sbjct: 135 IVFGFFALTFVTPLLRSFIPILGEFNSISPGIVVGIMIVPVITSMSEDAMSSVPNKIREG 194

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--- 225
           +     + ++    + +P +  G+V ++++ +S      +   +         L      
Sbjct: 195 AYGLGATKFEVATKVVLPAATSGVVASIVLGISRAIGETMIVSLAAGSSPTSSLSLTSSI 254

Query: 226 ----GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
               G  + +A  +    + +Y  +  +G       LL   +  W S +FR E 
Sbjct: 255 QTMTGYIVEVATGDAPFGSDIYYSIYAVGFTLFIFTLLMNLLSQWISKRFREEY 308



 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 18/149 (12%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            IIA+I+ +P+G+                 I+P  ++LA  P  VF         PL+ S
Sbjct: 92  TIIATIVSVPIGLGAAIYLNEYASDKARRIIKPILEILAGIPTIVFGFFALTFVTPLLRS 151

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +       ++   +++       I        S+ PN  +E A     T +     ++L
Sbjct: 152 FIPILGEFNSISPGIVVGIMIVPVITSMSEDAMSSVPNKIREGAYGLGATKFEVATKVVL 211

Query: 500 PGI----FPYYVTGAITACGGAWNASIVS 524
           P          V G   A G     S+ +
Sbjct: 212 PAATSGVVASIVLGISRAIGETMIVSLAA 240


>gi|167855759|ref|ZP_02478513.1| D-methionine transport system permease protein MetI [Haemophilus
           parasuis 29755]
 gi|167853099|gb|EDS24359.1| D-methionine transport system permease protein MetI [Haemophilus
           parasuis 29755]
          Length = 225

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFL 116
              T     +A  ++++       +A  +        + L  VL  I++I +S+P    L
Sbjct: 21  TLETLYMGFAATALAVVVGMPIGFIAFLTGKGEILEHKGLHQVLDVIINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVSKFYLPESLPILINGITLTL 162



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 14/208 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQ 419
           +N  T +    V      T++       +A ++ +P+G          I     +   + 
Sbjct: 6   INELTPKMWELVALSTLETLYMGFAATALAVVVGMPIGFIAFLTGKGEILEHKGLHQVLD 65

Query: 420 PFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               +  + P      V  P     V          + L +     +  L          
Sbjct: 66  VIINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNALLEI 123

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P+   E A S   T W+      LP   P  + G           S ++     G +   
Sbjct: 124 PSGLTEAAKSMGATNWQVVSKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGGLGNL 183

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               G +      K     +++ ++++ 
Sbjct: 184 AISYGEHRNMVYVKWIATVIIVAIVMIS 211


>gi|262372060|ref|ZP_06065339.1| phosphate ABC transporter, permease PstA [Acinetobacter junii
           SH205]
 gi|262312085|gb|EEY93170.1| phosphate ABC transporter, permease PstA [Acinetobacter junii
           SH205]
          Length = 464

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 56/152 (36%), Gaps = 4/152 (2%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP 111
           +  +  L      +   ML  +VIS+      A      A    +  ++   ++ + ++P
Sbjct: 235 SPAISGLAGAFMGSLFMMLIVIVISIPIGVASAIYLEEFAPKNMMTDIIEVNINNLAAVP 294

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + F       F+       + A L     +    +  +  +   SL  +P  + + +  
Sbjct: 295 SIVFGLLGAAIFIGWMQLP-LSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALG 353

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              S  Q  ++  +P ++PG++   ++ ++  
Sbjct: 354 LGASKVQTVFHHVLPLALPGIMTGSIIGVAHA 385



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 31/213 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL-VVSCVS 442
           + +++I  +I IP+G+              ++  I+     LAA P+ VF  L     + 
Sbjct: 249 LFMMLIVIVISIPIGVASAIYLEEFAPKNMMTDIIEVNINNLAAVPSIVFGLLGAAIFIG 308

Query: 443 YYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +  L  +  L   L++   T   ++    A   A P   ++ A     +  +   + +LP
Sbjct: 309 WMQLPLSAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASKVQTVFHHVLP 368

Query: 501 GIFPYYVTGAITACG--------------GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              P  +TG+I                   A+ AS+ +                 Y+ + 
Sbjct: 369 LALPGIMTGSIIGVAHALGETAPLLLIGMSAFVASVPTSPLDQATALPVQV----YLWQG 424

Query: 547 TEKGSF--PEVVLGVLIMCCFVLALNRF-LWHP 576
            E  +F        ++++   ++ LN   +W  
Sbjct: 425 NELRNFFEGRTAAAIIVLLALMIGLNSLAIWLR 457


>gi|110677587|ref|YP_680594.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109453703|gb|ABG29908.1| ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 546

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 28/217 (12%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF------- 118
            RT    L      +L  +  A + A        L+ IL ++       + +        
Sbjct: 326 MRTLFMSLVITGSCILLGYPVAWILANLPARTANLLMILVLL-----PFWTSLLVRTSAW 380

Query: 119 ------------TVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
                       T+V+   +     +     +   I A+    +  M   +Y  +  IP 
Sbjct: 381 KVMLQQQGVVNDTLVWLGIVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTIPP 440

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
                ++S   + W  FW +  P S+PG+    ++       + +  E++          
Sbjct: 441 SYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISN 500

Query: 224 GIGSYIALAIK-EQDLLAILYAMLTMLGVIFLYDQLL 259
            I  +I+ ++            +  +L + + YD+++
Sbjct: 501 RIAYHISSSLNWGLAAALGAILLAVVLALYWAYDRIV 537



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 36/118 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  +V        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 394 LVWLGIVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATN 453

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S  
Sbjct: 454 WTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLN 511


>gi|294055782|ref|YP_003549440.1| phosphate ABC transporter, inner membrane subunit PstA
           [Coraliomargarita akajimensis DSM 45221]
 gi|293615115|gb|ADE55270.1| phosphate ABC transporter, inner membrane subunit PstA
           [Coraliomargarita akajimensis DSM 45221]
          Length = 400

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQ--SIPILGFLTFTVVYFM 124
           T+L +  ++ I+L    + A   ++  R G  L  I L I+    +P + F  F    F+
Sbjct: 174 TSLLVAGSIAIALSLGVLCAIYLSEYSRPGKALQIIRLSILNLSGVPSIVFGLFGFGMFV 233

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +   V  + +A  F +    +  +  +  +S+  IP+   E S +   S W       
Sbjct: 234 LFFDWGV--SMIAGWFTLAIMALPVIIAASEESMRAIPKGFREGSLALGASKWTAIRTNV 291

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P++MPG++ + +M ++
Sbjct: 292 LPYAMPGILTSSIMGIA 308



 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 11/137 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVS 442
           T   V   I IA  + +   I++         +Q        L+  P+ VF    +    
Sbjct: 174 TSLLVAGSIAIALSLGVLCAIYLSEYSRPGKALQIIRLSILNLSGVPSIVF---GLFGFG 230

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHITGWRWWRYI 497
            + L  +  +S++  + T   +   VI  A      A P  F+E + +   + W   R  
Sbjct: 231 MFVLFFDWGVSMIAGWFTLAIMALPVIIAASEESMRAIPKGFREGSLALGASKWTAIRTN 290

Query: 498 ILPGIFPYYVTGAITAC 514
           +LP   P  +T +I   
Sbjct: 291 VLPYAMPGILTSSIMGI 307


>gi|288553549|ref|YP_003425484.1| phosphate ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288544709|gb|ADC48592.1| phosphate ABC transporter (permease) [Bacillus pseudofirmus OF4]
          Length = 306

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 89/246 (36%), Gaps = 18/246 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-QDVLYVIWLGCITMFRVVVLIIIASII 400
           + L +    +    + GI W ++ ++    +   D   ++     T++ + V+  +  ++
Sbjct: 45  FGLVVLAILIFRVFSQGIGWINVDFLTGRLSNNPDRAGIMGAILGTLWLMAVVAPVTMLL 104

Query: 401 WIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LL 455
            +   I++     +  I S IQ     LA  P+ VF  L ++          + L+  L 
Sbjct: 105 GVGTAIYLEAYAKKGKIHSFIQANISNLAGVPSIVFGILGMTIFVRALDLGGVVLAGGLT 164

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           M       ++        A PN   E +     T W+  + +ILP   P  +TGAI +  
Sbjct: 165 MSLLVLPIVVVASQEAIRAVPNHLSEASYGMGATKWQTIKNVILPAALPGILTGAILSLS 224

Query: 516 GAWNASIVSEVASWGHIHLRTTG------------LGAYIAESTEKGSFPEVVLGVLIMC 563
            A   +    V     + +   G            +  +  +++    +  +    +I+ 
Sbjct: 225 RAIGETAPLIVIGIPALLIPFPGGLMDRFTILPVQIYYWTIDASLVAEYANLAAATIIVL 284

Query: 564 CFVLAL 569
             VL +
Sbjct: 285 LIVLFI 290



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 65/185 (35%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V++  +I  +            +   +    D   +      T   M     +++L
Sbjct: 44  MFGLVVLAILIFRVFSQGIGWINVDFLTGRLSNNPDRAGIMGAILGTLWLMAVVAPVTML 103

Query: 82  FTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK  ++   +   +  +  +P + F    +  F+      + G  LA 
Sbjct: 104 LGVGTAIYLEAYAKKGKIHSFIQANISNLAGVPSIVFGILGMTIFVRALD--LGGVVLAG 161

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +++  +P  L E S     + WQ    + +P ++PG++   ++
Sbjct: 162 GLTMSLLVLPIVVVASQEAIRAVPNHLSEASYGMGATKWQTIKNVILPAALPGILTGAIL 221

Query: 199 SMSGG 203
           S+S  
Sbjct: 222 SLSRA 226


>gi|219870689|ref|YP_002475064.1| D-methionine transport system permease protein MetI [Haemophilus
           parasuis SH0165]
 gi|219690893|gb|ACL32116.1| D-methionine transport system permease protein MetI [Haemophilus
           parasuis SH0165]
          Length = 225

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFL 116
              T     +A  ++++       +A  +        + L  VL  I++I +S+P    L
Sbjct: 21  TLETLYMGFAATALAVVVGMPIGFIAFLTGKGEILEHKGLHQVLNVIINIGRSVP-FIIL 79

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  +G   AAI  +  S +         +L  IP  L E ++S   + 
Sbjct: 80  LVVLLPFTRLLVGTTLGTT-AAIVPLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATN 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P S+P L+  + +++
Sbjct: 139 WQVVSKFYLPESLPILINGITLTL 162



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 14/208 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQ 419
           +N  T +    V      T++       +A ++ +P+G          I     +   + 
Sbjct: 6   INELTPKMWELVALSTLETLYMGFAATALAVVVGMPIGFIAFLTGKGEILEHKGLHQVLN 65

Query: 420 PFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               +  + P      V  P     V          + L +     +  L          
Sbjct: 66  VIINIGRSVPFIILLVVLLPFTRLLVGTTLGTTAAIVPLSVSAIPFFARL--TSNALLEI 123

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P+   E A S   T W+      LP   P  + G           S ++     G +   
Sbjct: 124 PSGLTEAAKSMGATNWQVVSKFYLPESLPILINGITLTLVALIGYSAMAGAVGGGGLGNL 183

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMC 563
               G +      K     +++ ++++ 
Sbjct: 184 AISYGEHRNMVYVKWIATVIIVAIVMIS 211


>gi|331092420|ref|ZP_08341245.1| phosphate ABC transporter [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401263|gb|EGG80852.1| phosphate ABC transporter [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 287

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L      T L ++ A+ + +         + K  +   V+    + +  IP + +  F 
Sbjct: 69  ALLNTLFMTALSLIIAVPLGIFSAIFLVEYSGKGNKFVEVIRITTETLSGIPSIVYGLFG 128

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +++F++        + L+  F +    +  +  +  ++L ++P    E S        + 
Sbjct: 129 MLFFVSTLKWGY--SLLSGAFTLAIMILPLIMRTTEEALKSVPDTYREGSLGLGAGKLRT 186

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
            + + +P ++PG++  +++++ 
Sbjct: 187 VFRVVLPSAVPGILAGVILAVG 208



 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 10/180 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           +  F ++  +   I  + I ++                   +   + +  ++ II +P+G
Sbjct: 29  LITFTILLFLIAYILIKGIPHLTTDLFALKYTSDNGSLMPALLNTLFMTALSLIIAVPLG 88

Query: 406 I--------WIGFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
           I        + G        I+   + L+  P+ V+  F ++    +       L  +  
Sbjct: 89  IFSAIFLVEYSGKGNKFVEVIRITTETLSGIPSIVYGLFGMLFFVSTLKWGYSLLSGAFT 148

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I+        + P+ ++E +        R    ++LP   P  + G I A G
Sbjct: 149 LAIMILPLIMRTTEEALKSVPDTYREGSLGLGAGKLRTVFRVVLPSAVPGILAGVILAVG 208


>gi|258591858|emb|CBE68161.1| conserved membrane protein of unknown function [NC10 bacterium
           'Dutch sediment']
          Length = 539

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 62/154 (40%), Gaps = 23/154 (14%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGM---VLVPILDI----MQSIPILGFLTFTVVYFM 124
           ++  M++SLL       LAA   R      VLV  + I    +  +P + F  F + +F+
Sbjct: 295 VMMVMIMSLLVA-PLGVLAAFYLREYAKQGVLVSTVRIAVNNLAGVPSIVFGVFGLGFFI 353

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            L  G +                G  L A   +    V  +  +  + L  IP  + E S
Sbjct: 354 YLVGGSIDRLFYPEALPTPTFGTGGILWASLTLALMTVPVVIVATEEGLAAIPPGMREAS 413

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + ++  W + +P  MP ++  ++++M+  
Sbjct: 414 LALGATKFETTWRVVLPTVMPSILTGLILAMARA 447



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 79/259 (30%), Gaps = 17/259 (6%)

Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320
           + M  W+ K+R +         +    L       +            +  N   +    
Sbjct: 204 QEMEGWAAKYREQEARLATLRQASRQTLIVSVMGGQDTELPLQQIVRIVRPNSMGVWSKS 263

Query: 321 GVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379
           GV      E              +    +  V+  + + +    +G +   +  +     
Sbjct: 264 GVYLSRLWEFISGDPRESNTEGGVFPAIFGTVMMVMIMSLLVAPLGVLAAFYLREYAKQG 323

Query: 380 IWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           + +  + +    +  + + +  +  +G +I        ++              F+P  +
Sbjct: 324 VLVSTVRIAVNNLAGVPSIVFGVFGLGFFIYLVGGSIDRL--------------FYPEAL 369

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                +     LW SL +   T   ++     G +A P   +E + +   T +     ++
Sbjct: 370 PT-PTFGTGGILWASLTLALMTVPVVIVATEEGLAAIPPGMREASLALGATKFETTWRVV 428

Query: 499 LPGIFPYYVTGAITACGGA 517
           LP + P  +TG I A   A
Sbjct: 429 LPTVMPSILTGLILAMARA 447


>gi|254173400|ref|ZP_04880073.1| oligopeptide ABC transporter, permease protein [Thermococcus sp.
           AM4]
 gi|214032809|gb|EEB73638.1| oligopeptide ABC transporter, permease protein [Thermococcus sp.
           AM4]
          Length = 617

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 80/228 (35%), Gaps = 37/228 (16%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGI---WIGFRPHISSKIQPFAQLLAAFPANV 432
              +IW   I++   + + ++++II I  G+   ++G        +    +L ++ P+  
Sbjct: 404 WAALIWGSRISLVIGITVSLLSTIIGIIYGVTSAYLGGN--ADEILMRINELFSSIPSL- 460

Query: 433 FFPLVVSC-VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND---------FKEV 482
             P+++    +  H++ ++ + LL+IFG           G +              + E 
Sbjct: 461 --PILILLGATMGHISLSMMVLLLVIFG---------WMGVARISRSMALQIKEQTYIEA 509

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--- 539
           A +      R     +LP + PY           A  +         G     T G    
Sbjct: 510 AKALGAGTGRIVFKHMLPQLLPYAFAVIALGVPVAVISEASLSFLGLGDPTAVTWGQILH 569

Query: 540 GAYIAESTEKGSFPEVV---LGVLIMC----CFVLALNRFLWHPLYLY 580
            A +  +  KG +  V+   LG+  +         AL+R L   L   
Sbjct: 570 DAEVQSAATKGYWWWVLPPGLGIATVGLTFVLIGTALDRILNPRLRRL 617



 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 70/223 (31%), Gaps = 37/223 (16%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFL 116
             +L   +  + +  ++  ++S +   +Y   +A        +L+ I ++  SIP L   
Sbjct: 404 WAALIWGSRISLVIGITVSLLSTIIGIIYGVTSAYLGGNADEILMRINELFSSIPSL--- 460

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++          +   +  +       V  ++ SM   +    +   E +++     
Sbjct: 461 -PILILLGATMGHISLSMMVLLLVIFGWMGVARISRSMALQIKE--QTYIEAAKALGAGT 517

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            +  +   +P  +P     + + +       V SE        +   G+G   A+   + 
Sbjct: 518 GRIVFKHMLPQLLPYAFAVIALGVPVA----VISEA------SLSFLGLGDPTAVTWGQI 567

Query: 237 DLLA--------------------ILYAMLTMLGVIFLYDQLL 259
              A                    I    LT + +    D++L
Sbjct: 568 LHDAEVQSAATKGYWWWVLPPGLGIATVGLTFVLIGTALDRIL 610


>gi|163840641|ref|YP_001625046.1| glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954117|gb|ABY23632.1| glycine betaine transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 255

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               ++    I ++L           +  +   TL    L             A  I L+
Sbjct: 18  WRGLLIQPIAIAVVLIAFIIWLTTAQLSPVEAATLPPGPLSVLVIEHLKLTFVAAAIVLV 77

Query: 82  FTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                  L  +   RR    ++ + +I Q+ P +G +     +    +         AAI
Sbjct: 78  IAIPLGVLLTRGPFRRFSGPVIAVANIGQAAPAIGLVVLLAFWLGFGF--------WAAI 129

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    V  +  +    L  +   L E +R   ++       + +P ++P ++  +  +
Sbjct: 130 VALVLYSVLPVLRNTMIGLGQVDGRLIEAARGMGMTPLSVLLRIELPLAVPVMLAGIRTA 189

Query: 200 M 200
           +
Sbjct: 190 L 190



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 8/205 (3%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394
            S  R   +  I    V+    I +    +  +         L V+ +  + +  V   I
Sbjct: 15  ASTWRGLLIQPIAIAVVLIAFIIWLTTAQLSPVEAATLPPGPLSVLVIEHLKLTFVAAAI 74

Query: 395 IIASIIWIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           ++  +I IP+G+ +  G     S  +   A +  A PA     L+   + +         
Sbjct: 75  VL--VIAIPLGVLLTRGPFRRFSGPVIAVANIGQAAPAIGLVVLLAFWLGFGF----WAA 128

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            + ++  +   +L N + G         E A    +T       I LP   P  + G  T
Sbjct: 129 IVALVLYSVLPVLRNTMIGLGQVDGRLIEAARGMGMTPLSVLLRIELPLAVPVMLAGIRT 188

Query: 513 ACGGAWNASIVSEVASWGHIHLRTT 537
           A       + ++   + G + L  T
Sbjct: 189 ALVLLVGTATLAAFVNGGGLGLLIT 213


>gi|306822103|ref|ZP_07455486.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|309802537|ref|ZP_07696642.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304554652|gb|EFM42556.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|308220854|gb|EFO77161.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 330

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     +V  FTY   ++  W    T+  VV     A+++ I  G  +
Sbjct: 87  FTSTFGLGFGKTFALWDNVVTVFTYDGGIFGRWF-LNTVLYVVAGAGGATLLAIMGGYGL 145

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   +      + A + P            +  +L    W  ++    + + +   
Sbjct: 146 AKFRFPGRRAVFVVVIGAISVPGIALAVPQFLLFAKLNLTNTPWAMVIPSLVSTFGLYLM 205

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A       +R +  + LP + P  VT A+ A    W N  +   +
Sbjct: 206 WIFSDQAVPTELLEAARVDGAGEFRTFFQVSLPLLAPGIVTTALFAIVATWNNYFLPLIM 265

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 266 LKDSDWYPLTIGLNQWKDQASTAG 289



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L +++    + L   +     AK R  G   V ++ I   S+P +       +
Sbjct: 118 RWFLNTVLYVVAGAGGATLLAIMGGYGLAKFRFPGRRAVFVVVIGAISVPGIALAVPQFL 177

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R      ++ F+
Sbjct: 178 LFAKLNLTNTP----WAMVIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFF 233

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 234 QVSLPLLAPGIVTTALFAIVATWN 257


>gi|257462617|ref|ZP_05627027.1| ABC transporter permease protein [Fusobacterium sp. D12]
 gi|317060265|ref|ZP_07924750.1| D-methionine transport system permease metI [Fusobacterium sp. D12]
 gi|313685941|gb|EFS22776.1| D-methionine transport system permease metI [Fusobacterium sp. D12]
          Length = 218

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 12/149 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPI 112
           L      T   ++ + V +L+  F +  L   ++        +   +L  ++++++S P 
Sbjct: 6   LWTSTLETLYMVVFSTVFALILGFPFGILLVITKENGLWTHPKCHQILETVINVLRSFP- 64

Query: 113 LGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
             F+   +V F ++           AAI  +       +   +  SL  +   L E S S
Sbjct: 65  --FIILMIVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIESSLSEVDSGLIEASES 122

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
              S W     + +P +   L+  + +++
Sbjct: 123 MGASNWTIISRVMIPEAASSLINGITITI 151



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 376 VLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIG--------FRPHISSKIQPFAQLLA 426
           V  ++W   + T++ VV   + A I+  P GI +           P     ++    +L 
Sbjct: 2   VFNMLWTSTLETLYMVVFSTVFALILGFPFGILLVITKENGLWTHPKCHQILETVINVLR 61

Query: 427 AFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +FP  +   ++     V       +    + +  GT  ++   + +  S   +   E + 
Sbjct: 62  SFPFIILMIVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIESSLSEVDSGLIEASE 121

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           S   + W     +++P      + G     
Sbjct: 122 SMGASNWTIISRVMIPEAASSLINGITITI 151


>gi|241202934|ref|YP_002974030.1| phosphate ABC transporter membrane protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240856824|gb|ACS54491.1| phosphate ABC transporter, inner membrane subunit PstA [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 440

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  +V++L      +      A   +L  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + L++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +S    +   P   +L   L++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLSVFINFIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQM 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 VFHHVLPLAMPGILTGTIIGLAHA 362


>gi|269122664|ref|YP_003310841.1| phosphate ABC transporter inner membrane subunit PstA [Sebaldella
           termitidis ATCC 33386]
 gi|268616542|gb|ACZ10910.1| phosphate ABC transporter, inner membrane subunit PstA [Sebaldella
           termitidis ATCC 33386]
          Length = 293

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 28/251 (11%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
              LV+ +  I+  GI+  +   D +   P  +       Y +   L  L  + +  L T
Sbjct: 32  IVFLVLLLFGIIKQGIRWMS--FDFLTNFPSKIRPQRAGVYPA--LLGSLWLVGLVGLIT 87

Query: 84  FVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
                 AA        K  +L   L   +  +  +P + +    +  F  L   +  G+ 
Sbjct: 88  IPVGVGAAIYLEEYSNKKSKLYNFLEVNISNLAGVPAIVYGLLGLALFSRLKGFR--GSI 145

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA    +    +  +  S  +++  +P  L E +    L+ WQ    + +P++ PG+   
Sbjct: 146 LAGAVTLSLMVLPVVIVSSREAIKAVPGILREAAYGLGLTRWQMIKAVVLPYASPGIFTG 205

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLP---GIGS---------YIALAIKEQDLLAILY 243
           +++S+S       A+ ++VVG          GI S         Y    + +++   +  
Sbjct: 206 IILSLSRALGE--AAPLLVVGAASYVTRIPNGIMSRYTALPIQIYQWSGMPKKEFQELAA 263

Query: 244 AMLTMLGVIFL 254
             + +L VI L
Sbjct: 264 TGIIVLLVILL 274



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 10/182 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I +  ++    I    + + +         +          +   + L+ +  +I IPVG
Sbjct: 32  IVFLVLLLFGIIKQGIRWMSFDFLTNFPSKIRPQRAGVYPALLGSLWLVGLVGLITIPVG 91

Query: 406 IWIGFR--------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
           +               + + ++     LA  PA V+    L +           L  ++ 
Sbjct: 92  VGAAIYLEEYSNKKSKLYNFLEVNISNLAGVPAIVYGLLGLALFSRLKGFRGSILAGAVT 151

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       ++ +      A P   +E A    +T W+  + ++LP   P   TG I +  
Sbjct: 152 LSLMVLPVVIVSSREAIKAVPGILREAAYGLGLTRWQMIKAVVLPYASPGIFTGIILSLS 211

Query: 516 GA 517
            A
Sbjct: 212 RA 213


>gi|161528381|ref|YP_001582207.1| phosphonate ABC transporter inner membrane subunit [Nitrosopumilus
           maritimus SCM1]
 gi|160339682|gb|ABX12769.1| phosphonate ABC transporter, inner membrane subunit [Nitrosopumilus
           maritimus SCM1]
          Length = 265

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 18/200 (9%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPILGFLTF 118
                 T        ++ +      +  AA+   S+ +   +  +L  +++ P + +   
Sbjct: 58  LWAMFETIQMAFIGTIVGVAIALPLSMFAARNLNSKYVYAPIRALLAAIRTFPSILWAIL 117

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+               A + AI    +  +    Y+++  I  D  +   S  +S WQ
Sbjct: 118 FVIMVGLG--------PFAGVLAIIMYTIGFVAKLQYEAIETIDSDPMDAVSSIGVSKWQ 169

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
              Y+ +P S   L     +S     F     +  ++G  ++   GIG YI   IK  + 
Sbjct: 170 LIRYVVIPESASHL-----LSQMLYMFDYNVRQTSILG--LVGAGGIGFYIINYIKFFEY 222

Query: 239 LAILYAMLTMLGVIFLYDQL 258
                 ML +L  + + D +
Sbjct: 223 GKAAVFMLVVLAAVLVIDWV 242



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 75/204 (36%), Gaps = 14/204 (6%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR---PHISSKIQPFAQLLA 426
               + +   +W    T+    +  I+   I +P+ ++        ++ + I+     + 
Sbjct: 48  EVDSKYIPTALWAMFETIQMAFIGTIVGVAIALPLSMFAARNLNSKYVYAPIRALLAAIR 107

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            FP+ ++  L V  V            L +I  T  ++            +D  +  SS 
Sbjct: 108 TFPSILWAILFVIMVGLGP----FAGVLAIIMYTIGFVAKLQYEAIETIDSDPMDAVSSI 163

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
            ++ W+  RY+++P    + ++  +         + +  +   G       G+G YI   
Sbjct: 164 GVSKWQLIRYVVIPESASHLLSQMLYMFDYNVRQTSILGLVGAG-------GIGFYIINY 216

Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570
            +   + +  + +L++   VL ++
Sbjct: 217 IKFFEYGKAAVFMLVVLAAVLVID 240


>gi|21224393|ref|NP_630172.1| ABC transporter permease [Streptomyces coelicolor A3(2)]
 gi|256784417|ref|ZP_05522848.1| ABC transporter permease protein [Streptomyces lividans TK24]
 gi|289768296|ref|ZP_06527674.1| ABC transporter permease [Streptomyces lividans TK24]
 gi|4691389|emb|CAB41556.1| probable ABC transport permease [Streptomyces coelicolor A3(2)]
 gi|289698495|gb|EFD65924.1| ABC transporter permease [Streptomyces lividans TK24]
          Length = 237

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 92  KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           + R L   ++ +  +  +IP L      + Y            EL  +  +    +  + 
Sbjct: 46  RFRWLYPPVLGVTTVFYAIPSLAVFVVLIDYTGQ--------TELTVMIPLAVYSLVVLV 97

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
            ++   + ++P +    S +      +++  + +P ++P ++  + +++S          
Sbjct: 98  PAIVDGVRSVPEETLAASTAMGFGPVRRYLQVQLPIAVPAILAGLRVAVSAS------IS 151

Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           ++ VG  +     +G+ +A A K       + ++LT   +  L D LL
Sbjct: 152 LVSVGALIGNQGALGNLLADAQKYGRPELAVNSVLTTAVLAVLCDALL 199



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 10/166 (6%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                 +   +     +  A P+   F +++       L   + L++  +      I   
Sbjct: 44  CVRFRWLYPPVLGVTTVFYAIPSLAVFVVLIDYTGQTELTVMIPLAVYSLVVLVPAI--- 100

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
            + G  + P +    +++      R +  + LP   P  + G   A   + +   V  + 
Sbjct: 101 -VDGVRSVPEETLAASTAMGFGPVRRYLQVQLPIAVPAILAGLRVAVSASISLVSVGALI 159

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                      LG  +A++ + G     V  VL      +  +  L
Sbjct: 160 GNQGA------LGNLLADAQKYGRPELAVNSVLTTAVLAVLCDALL 199


>gi|333023018|ref|ZP_08451082.1| putative maltose permease [Streptomyces sp. Tu6071]
 gi|332742870|gb|EGJ73311.1| putative maltose permease [Streptomyces sp. Tu6071]
          Length = 305

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRMLSAM 76
           +    +V      L  G  +   P  I+D + ++     L+      +   T +  L   
Sbjct: 51  IALVPVVWLAFLSLGPGKDDYLHPGRILDHLTLSNYSYVLEHTKFWDWLQSTLIVALGTT 110

Query: 77  VISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ + F        ++ R      L+ +L + Q+ PI   +      F  L    +I + 
Sbjct: 111 LLGVAFAATTGYAVSRMRFPGQRPLMWVLLLTQAFPIAVLIVPMYEIFSELG---LIDSY 167

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              I    T+ +    + +      IP +++E  R   LS +  FW L +P + PGL   
Sbjct: 168 FGVILLNCTTAIPYSAWLLKGYFDTIPFEIDEAGRIDGLSPFGTFWRLVLPLARPGLAVA 227

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIP-LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              +    W  V  +   ++ D       G+ ++++    + +L+A    ++ +   IF 
Sbjct: 228 AFYTFITAWAEVAFASTFLLDDEKYTFAVGLQTFVSEHDAQWNLMAATAVLIAVPVTIFF 287

Query: 255 Y 255
           Y
Sbjct: 288 Y 288



 Score = 38.0 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 11/244 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCITMFRVVVLI-II 396
           ++ + W   +        +   G I++H T  +  YV      W    +   V +   ++
Sbjct: 53  LVPVVWLAFLSLGPGKDDYLHPGRILDHLTLSNYSYVLEHTKFWDWLQSTLIVALGTTLL 112

Query: 397 ASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFP-ANVFFPLVVSCVSYYHLNPNLWLSL 454
                   G  +          +     L  AFP A +  P+         ++    + L
Sbjct: 113 GVAFAATTGYAVSRMRFPGQRPLMWVLLLTQAFPIAVLIVPMYEIFSELGLIDSYFGVIL 172

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
           L       Y  + +       P +  E      ++ +  +  ++LP   P     A    
Sbjct: 173 LNCTTAIPYSAWLLKGYFDTIPFEIDEAGRIDGLSPFGTFWRLVLPLARPGLAVAAFYTF 232

Query: 515 GGAWNASIVSEVASWGHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             AW     +              GL  +++E   + +   +    +++   V      +
Sbjct: 233 ITAWAEVAFASTFLLDDEKYTFAVGLQTFVSEHDAQWNL--MAATAVLIAVPVTIFFYLV 290

Query: 574 WHPL 577
              L
Sbjct: 291 QRHL 294


>gi|209547779|ref|YP_002279696.1| phosphate ABC transporter inner membrane subunit PstA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533535|gb|ACI53470.1| phosphate ABC transporter, inner membrane subunit PstA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 440

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  +V++L      +      A   RL  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FVGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + L++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +S    +   P   +L   L++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLSVFINFVGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQM 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 VFHHVLPLAMPGILTGTIIGLAHA 362


>gi|27363771|ref|NP_759299.1| methionine ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27359887|gb|AAO08826.1| Methionine ABC transporter permease protein [Vibrio vulnificus
           CMCP6]
          Length = 225

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           ++L+   L     +T   +  A V+          +   +++        L  VL  I++
Sbjct: 10  LSLNTDLLLGATWQTLYMVAVAGVVGFAIGIPLGVILHTTKKGGLLENTKLNSVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P +V ++ +++
Sbjct: 128 IEAAQSMGATPLQIITKVLLPEALPTIVNSVTITL 162



 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 60/193 (31%), Gaps = 20/193 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  ++   I IP+G+ +             ++S +     +  + P  V     
Sbjct: 24  TLYMVAVAGVVGFAIGIPLGVILHTTKKGGLLENTKLNSVLGAIVNIGRSVPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P    E A S   T  + 
Sbjct: 84  IPVTKLLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALLEVPTGLIEAAQSMGATPLQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  V           + S ++     G +          I     +    
Sbjct: 142 ITKVLLPEALPTIVNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDIT 195

Query: 554 EVVLGVLIMCCFV 566
            + + V+++   V
Sbjct: 196 IMAVTVVMLIVLV 208


>gi|70726524|ref|YP_253438.1| hypothetical protein SH1523 [Staphylococcus haemolyticus JCSC1435]
 gi|68447248|dbj|BAE04832.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 308

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 24/294 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-- 62
           N      S +I P I  ++A + ++  I IL   I ET      V IV         P  
Sbjct: 15  NAKKGGFSDKIVPIILGIIAAISILTTIGILFTLITETITFFTRVSIVEFLFTKDWNPTG 74

Query: 63  ----QYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPI 112
                      +  L   VI+ +        AA       S +   ++ PIL+I+  IP 
Sbjct: 75  SDPKYGIWALVIGTLKITVIATIVAVPIGLGAAIYLSEYASDKARRIIKPILEILAGIPT 134

Query: 113 LGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + F    LTF       + P       ++    +    V  +T     ++ ++P  + E 
Sbjct: 135 IVFGFFALTFVTPVLRTIIPALDSFNSVSPGIVVGIMIVPVITSMSEDAMASVPNKIREG 194

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL------ 222
           +     + ++    + +P +  G+V ++++ +S      +   +         L      
Sbjct: 195 AYGLGSTKFEVATKVVLPAAASGVVASIVLGISRAIGETMIVSLAAGSSPTASLNLTNSI 254

Query: 223 -PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
               G  + +A  +    + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 255 QTMTGYIVEVATGDATFGSDMYYSIYAVGFTLFIFTLIMNLISYWISKRFREEY 308



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  D  Y IW   I   ++ V   IA+I+ +P+G+                 I+P  +
Sbjct: 71  NPTGSDPKYGIWALVIGTLKITV---IATIVAVPIGLGAAIYLSEYASDKARRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ + +       ++   +++       I        ++ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPVLRTIIPALDSFNSVSPGIVVGIMIVPVITSMSEDAMASV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           PN  +E A     T +     ++LP      V   +     A   +++  +A+       
Sbjct: 188 PNKIREGAYGLGSTKFEVATKVVLPAAASGVVASIVLGISRAIGETMIVSLAAGSSPTAS 247

Query: 536 TT 537
             
Sbjct: 248 LN 249


>gi|326804101|ref|YP_004321919.1| phosphate ABC transporter, permease protein PstA [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650313|gb|AEA00496.1| phosphate ABC transporter, permease protein PstA [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 273

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           + ++Y+  +F F  +  + + +  + + Y+       +          ++   + +++ +
Sbjct: 7   RALTYLFTLFTFGWLFFIILYVLVKGVPYLSPELFAWNYTTENVSMMPSIITTIYIVLGS 66

Query: 398 SIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLN 447
            +I +P+G++ GF               I+     L   P+ V+  F ++   ++     
Sbjct: 67  LLIAVPLGVFAGFYLVEYAGKNNKWVEAIRIATDTLTGVPSIVYGLFGMLAFVLAAQFQY 126

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L   L M       I+ N   G  +  +  +  +        R    I+LP   P  +
Sbjct: 127 SVLAGILTMAIMVLPLIIRNTEEGLMSVNDSLRFASYGLGAGKLRTIFRIVLPVAMPGIL 186

Query: 508 TGAITACG 515
           +G I A G
Sbjct: 187 SGVILAIG 194



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 54/133 (40%), Gaps = 2/133 (1%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
              +L A+ + +   F     A K+ +    +    D +  +P + +  F ++ F+    
Sbjct: 64  LGSLLIAVPLGVFAGFYLVEYAGKNNKWVEAIRIATDTLTGVPSIVYGLFGMLAFV--LA 121

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            +   + LA I  +    +  +  +  + L ++   L   S        +  + + +P +
Sbjct: 122 AQFQYSVLAGILTMAIMVLPLIIRNTEEGLMSVNDSLRFASYGLGAGKLRTIFRIVLPVA 181

Query: 189 MPGLVWNMMMSMS 201
           MPG++  +++++ 
Sbjct: 182 MPGILSGVILAIG 194


>gi|167630152|ref|YP_001680651.1| phosphate abc transporter, permease protein pstc [Heliobacterium
           modesticaldum Ice1]
 gi|167592892|gb|ABZ84640.1| phosphate abc transporter, permease protein pstc [Heliobacterium
           modesticaldum Ice1]
          Length = 319

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 11/209 (5%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIV----DIVPITLDVH-SLPQYASRTTLRMLSAMVI 78
              +++  + +    I   T P           PI+      L    + + +    A+VI
Sbjct: 51  VVTIILIFLFLFKEAIPLMTDPAAGTLLSKKWYPISSPPVFGLLPLIAGSIIVTFGAIVI 110

Query: 79  SLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVI 132
           S+      A   A   S  +   L P ++++  IP  ++GF    V+     +L+     
Sbjct: 111 SVPLGVGAAIYLAMVASPVVRETLKPAIEVLAGIPSVVVGFFGLAVLAPLIKDLFNLPTG 170

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              L     +    +  +T     ++ ++PR   E S S   + WQ    + VP ++ G+
Sbjct: 171 LTALTGAITLALMALPTITSISEDAISSVPRRYMEASLSLGATRWQAIKTVIVPAALSGI 230

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
              +M+ +       +   M+     VIP
Sbjct: 231 TAAIMLGIGRAIGETMTVLMVTGNAGVIP 259



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 397 ASIIWIPVGI------WIGFRPHISSKIQPFAQLLAAFPANV--------FFPLVVSCVS 442
           A +I +P+G+       +   P +   ++P  ++LA  P+ V          PL+    +
Sbjct: 107 AIVISVPLGVGAAIYLAMVASPVVRETLKPAIEVLAGIPSVVVGFFGLAVLAPLIKDLFN 166

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  L  ++ +       I        S+ P  + E + S   T W+  + +I+P  
Sbjct: 167 LPTGLTALTGAITLALMALPTITSISEDAISSVPRRYMEASLSLGATRWQAIKTVIVPAA 226

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
                   +   G A   ++   + +     +  T
Sbjct: 227 LSGITAAIMLGIGRAIGETMTVLMVTGNAGVIPDT 261


>gi|150397345|ref|YP_001327812.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150028860|gb|ABR60977.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 288

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 82/241 (34%), Gaps = 13/241 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ-------YASRTTLRMLS 74
                +V  + N      +    P  +        +   L         YA+ + L  L 
Sbjct: 31  FFLMPIVWSVANSFKPAAEALANPVALFSKAFSLENYRRLEDVGAGWYVYAANSVLIALG 90

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +V+++L         AK R  G  L+  + +M ++ ++ F +     F+ L    +   
Sbjct: 91  TIVLTVLIAVPAGYGFAKFRFPGQSLI-FVVVMATM-MIPFQSILTPLFLILKFLGLQNN 148

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
               +    T Q+    F M  S   IP  L E +R    S W     + +P ++PG+  
Sbjct: 149 LFGLVLVYTTFQLPFSIFMMRNSFDAIPSALIEAARIDGASQWALLRRIMMPLALPGVAT 208

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             M +    W   +A+ + +       LP     + + +       I +  L     + +
Sbjct: 209 VAMFAFLNSWNEFLAALIFLSDQNKFTLP----IMLVNVSSGIYGIIDWGALQAGITVTM 264

Query: 255 Y 255
           +
Sbjct: 265 F 265



 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 2/145 (1%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA--NVFFPLVVS 439
               ++   +  I++  +I +P G            +     +        ++  PL + 
Sbjct: 80  YAANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVVVMATMMIPFQSILTPLFLI 139

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  N    L L+       + +F +     A P+   E A     + W   R I++
Sbjct: 140 LKFLGLQNNLFGLVLVYTTFQLPFSIFMMRNSFDAIPSALIEAARIDGASQWALLRRIMM 199

Query: 500 PGIFPYYVTGAITACGGAWNASIVS 524
           P   P   T A+ A   +WN  + +
Sbjct: 200 PLALPGVATVAMFAFLNSWNEFLAA 224


>gi|320540056|ref|ZP_08039712.1| putative DL-methionine transporter subunit [Serratia symbiotica
           str. Tucson]
 gi|320029905|gb|EFW11928.1| putative DL-methionine transporter subunit [Serratia symbiotica
           str. Tucson]
          Length = 217

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLT 117
             T +    +     +       L           +  L  VL  +++I +SIP    L 
Sbjct: 14  GETFMMTFISGFFGFVLGLPVGVLLYVTRPGQIIANNTLYKVLSGLVNIFRSIP-FIILL 72

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  
Sbjct: 73  VWMIPFTRMVVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPPGLLEAARAMGATPM 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSM 200
           Q    + +P ++PGLV    +++
Sbjct: 132 QIIKKVLLPEALPGLVNAATITL 154



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 40/142 (28%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T     +      ++ +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TFMMTFISGFFGFVLGLPVGVLLYVTRPGQIIANNTLYKVLSGLVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 V    +     +  L + G   +I   V       P    E A +   T  +  
Sbjct: 76  IPFTRMVVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPPGLLEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGG 516
           + ++LP   P  V  A      
Sbjct: 135 KKVLLPEALPGLVNAATITLIT 156


>gi|313905396|ref|ZP_07838761.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
 gi|313469719|gb|EFR65056.1| binding-protein-dependent transport systems inner membrane
           component [Eubacterium cellulosolvens 6]
          Length = 252

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 73/190 (38%), Gaps = 6/190 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A  T +   + +V   L  ++ A +A+   + G   + ++    S+P++           
Sbjct: 50  ALSTMMVAFAGLVAGSLLGYLVAVMASIFPKAGKGGLSVIGAFASVPVVALAPVINNLTK 109

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           ++     + + +A I  +      NMT + Y+ L  +    E++  ++        + L 
Sbjct: 110 DVSRDANLRSMVAKIIVVSLIAAANMTLNAYRGLTELKPFSEDLMATYAAKKRVVLFKLR 169

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P S+P +   + +S+       + SE          + G+G  I   I         +A
Sbjct: 170 IPNSLPYIFTALKVSVPASIMTAIVSEYFA-----EYITGVGRQIRENIVLAQYSTA-WA 223

Query: 245 MLTMLGVIFL 254
            +TM  ++ +
Sbjct: 224 YITMACILGI 233



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 9/190 (4%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
              TM      ++  S++   V +     P             A+ P     P++ +   
Sbjct: 50  ALSTMMVAFAGLVAGSLLGYLVAVMASIFPKAGKGGLSVIGAFASVPVVALAPVINNLTK 109

Query: 443 YYHLNPNL----WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               + NL       +++       +  N   G +      +++ +++          + 
Sbjct: 110 DVSRDANLRSMVAKIIVVSLIAAANMTLNAYRGLTELKPFSEDLMATYAAKKRVVLFKLR 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           +P   PY  T    +   +   +IVSE  +        TG+G  I E+     +      
Sbjct: 170 IPNSLPYIFTALKVSVPASIMTAIVSEYFA-----EYITGVGRQIRENIVLAQYSTAWAY 224

Query: 559 VLIMCCFVLA 568
           + + C   + 
Sbjct: 225 ITMACILGIG 234


>gi|170767533|ref|ZP_02901986.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia albertii TW07627]
 gi|170123867|gb|EDS92798.1| ABC transporter, quaternary amine uptake (QAT) family, permease
           protein [Escherichia albertii TW07627]
          Length = 243

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/249 (11%), Positives = 77/249 (30%), Gaps = 18/249 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   + +  ++   L   Q            P+ L   S           +  + + +++
Sbjct: 8   LSWLIALFVMLIFWLPYSQPLFSALFPQLPRPVYL-QESFAVLTLEHFWLVGISSLFAVI 66

Query: 82  FTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                     +        ++  I  + Q+ P +  L   V                 AI
Sbjct: 67  IGAGAGIAVTRPWGAEFRPMVETIAAVGQTFPPVAVLALAVPVIGFGLQP--------AI 118

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    V  +  +    L  I   + +V++   +S  Q+   + +P + P ++  + +S
Sbjct: 119 IALILYGVLPILQATLAGLGAIDDSVTDVAKGMGMSRGQRLRKVELPLAAPVILAGVRIS 178

Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +         +  +           +G+ I + +   +   ++   L +     + D+L 
Sbjct: 179 VIINIGTATIASTVGAST-------LGTPIIIGLSGFNTAYVIQGALLVALAAIIVDRLF 231

Query: 260 FRPMIVWSN 268
            + +   S 
Sbjct: 232 EKLVQALSQ 240



 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 76/235 (32%), Gaps = 17/235 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
            L   +  ++  +       S  +               L     + V +  + A II  
Sbjct: 10  WLIALFVMLIFWLPYSQPLFSALFPQLPRPVYLQESFAVLTLEHFWLVGISSLFAVIIGA 69

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             GI +       ++ +P  + +AA    FP      L V  + +      + L L  + 
Sbjct: 70  GAGIAV--TRPWGAEFRPMVETIAAVGQTFPPVAVLALAVPVIGFGLQPAIIALILYGVL 127

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
                IL   +AG  A  +   +VA    ++  +  R + LP   P  + G   +     
Sbjct: 128 ----PILQATLAGLGAIDDSVTDVAKGMGMSRGQRLRKVELPLAAPVILAGVRISVIINI 183

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + ++         +  + LG  I       +   V+ G L++    + ++R  
Sbjct: 184 GTATIA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIVDRLF 231


>gi|116492238|ref|YP_803973.1| ABC-type phosphate transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102388|gb|ABJ67531.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 295

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  ++++ ++  +L           +            +      +   +   ++IS   
Sbjct: 20  IVILILVALLGFILITGLPHVTWSFLTSPASAFNAGGGIGDQLFNSFYLLFLTLLISFPI 79

Query: 83  TFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +       A   K  R+   +   ++++ S+P +    F  + F+  +  K+  + ++  
Sbjct: 80  SLGAGIYLAEYAKKNRVTEAIRITIEVLSSLPSVVVGLFGFLLFVVQF--KLGFSIISGA 137

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    +  +T ++  SL  +     E   S  LS W+    + VP ++PG++  +++S
Sbjct: 138 IALTFFNLPLLTRNIENSLNGVSNLQREAGLSLGLSRWKTVTKVVVPAALPGIITGIILS 197

Query: 200 MSGGWFFVVASEMIVVGDT 218
            +G  F   A+ +   G +
Sbjct: 198 -AGRVFGEAAALIFTAGQS 215



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 69/201 (34%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----------DVLYVIWLGCITMF 388
           +++  +      +V  + + +    +   + H T+               +      + +
Sbjct: 8   KIATAVIYLLVGIVILILVALLGFILITGLPHVTWSFLTSPASAFNAGGGIGDQLFNSFY 67

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYH 445
            + + ++I+  I +  GI++      +   +      ++L++ P+     +VV    +  
Sbjct: 68  LLFLTLLISFPISLGAGIYLAEYAKKNRVTEAIRITIEVLSSLPS-----VVVGLFGFLL 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYII 498
                 L   +I G      FN+        N         +E   S  ++ W+    ++
Sbjct: 123 FVVQFKLGFSIISGAIALTFFNLPLLTRNIENSLNGVSNLQREAGLSLGLSRWKTVTKVV 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
           +P   P  +TG I + G  + 
Sbjct: 183 VPAALPGIITGIILSAGRVFG 203


>gi|212692969|ref|ZP_03301097.1| hypothetical protein BACDOR_02470 [Bacteroides dorei DSM 17855]
 gi|212664438|gb|EEB25010.1| hypothetical protein BACDOR_02470 [Bacteroides dorei DSM 17855]
          Length = 246

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 90/236 (38%), Gaps = 9/236 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
           A  +++ ++ I+++   +      + +         ++      +    +   V+ +L  
Sbjct: 5   AVFVILPLLLIVVYAFMDDAGYFTLGNFAKFFAHPEAI-NTFVYSIGVAIITTVVCILLG 63

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG-KVIGAELAAIFAI 142
           +  A +  ++R      V +L I+   P+   +    +  + L+    V   E A IF +
Sbjct: 64  YPAAYILTQTRMKYASTVVVLFIL---PMWVNILIRTLATVALFDFMNVPLGEGALIFGM 120

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
             + +  M + +Y +L  + +   E ++    +  Q F+   +P SMPG+V  ++M    
Sbjct: 121 VYNFLPFMIYPIYNTLQKLDKSYVEAAQDLGANPMQVFFKAVLPLSMPGIVSGILMVFMP 180

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +E++ + +  +     G+ I   I            L ML +I     L
Sbjct: 181 TISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIMLFLIGATTLL 232


>gi|325961957|ref|YP_004239863.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468044|gb|ADX71729.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 298

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 4/204 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Q    +    ++  VISL+     A   A+ + R   +++  +      P +  +T    
Sbjct: 90  QALLNSVFIGVTVTVISLVIGVFAAYALARLNFRFKFLVLGFILGASMFPGVALITPLFQ 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F N+     +G   A I    +  +    +++      +P +LEE +R    +  Q F 
Sbjct: 150 LFTNIG---WMGTYQALIIPNISFVLPLTVYTLTSFFREMPWELEESARVDGCTQGQAFR 206

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P +    +++    W   + +  +    T      I S+      +    AI
Sbjct: 207 KVIMPLAAPAIFTTAILAFISSWNEFLIASQLSNDATQPVTVAIASFAGAQPNQIPYTAI 266

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIV 265
           + A   +   + +   +  R ++ 
Sbjct: 267 MAAGTIVTIPLVILVLVFQRKIVA 290



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 68/188 (36%), Gaps = 4/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-FPANVFF-PLVVSCVSY 443
           ++F  V + +I+ +I +     +         +     L A+ FP      PL     + 
Sbjct: 95  SVFIGVTVTVISLVIGVFAAYALARLNFRFKFLVLGFILGASMFPGVALITPLFQLFTNI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     L +  I       ++ + +     P + +E A     T  + +R +I+P   
Sbjct: 155 GWMGTYQALIIPNISFVLPLTVYTLTSFFREMPWELEESARVDGCTQGQAFRKVIMPLAA 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG--VLI 561
           P   T AI A   +WN  +++   S       T  + ++      +  +  ++    ++ 
Sbjct: 215 PAIFTTAILAFISSWNEFLIASQLSNDATQPVTVAIASFAGAQPNQIPYTAIMAAGTIVT 274

Query: 562 MCCFVLAL 569
           +   +L L
Sbjct: 275 IPLVILVL 282


>gi|146277958|ref|YP_001168117.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556199|gb|ABP70812.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 449

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 6/159 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPIL 104
            D   +  +   L      +   M   +V++L      +      A K+R   ++ V I 
Sbjct: 211 PDASELRPEAAGLGVAILGSAYMMFIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIS 270

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + + ++P + F    +  F+N + G    A +     +    +  +  +   SL  +P  
Sbjct: 271 N-LAAVPSIVFGILGLAIFIN-FMGLPQSAPIVGGLVLTLMTLPTIIIATRASLKAVPPS 328

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           + + +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 329 IRDAALGVGASKMQAIFHHVLPLAMPGILTGTIIGLAQA 367



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     ++ I  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVAILGSAYMMFIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P        L++   T   I+    A   A P   ++ A     +  + 
Sbjct: 284 GLAIFINFMGLPQSAPIVGGLVLTLMTLPTIIIATRASLKAVPPSIRDAALGVGASKMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 IFHHVLPLAMPGILTGTIIGLAQA 367


>gi|303238215|ref|ZP_07324751.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
 gi|302594261|gb|EFL63973.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
          Length = 279

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
               + +  +  S T L  + +++I ++F    A    K+R +  +L      ++++P  
Sbjct: 81  FDFTLIAFLETLSITILATIYSIIIGIIFGAFSARNLVKNRIVTTLLSSFFTFLRAVPTP 140

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            ++   +V         V+G  + AI     +          QS  N+P +  E      
Sbjct: 141 VWVLLALVCLGLGPVPGVVGLSVHAIAFFSKA--------FSQSFENVPNETIEALEVTG 192

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S  Q F+   +P ++  +     ++ SG  F +   E  ++G  ++   GIG  I  ++
Sbjct: 193 ASKLQIFFSAVLPSALSQI-----IAWSGLRFEINFKESAILG--MVGAGGIGYAITNSM 245

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
           +  +      A+L +    +L + L 
Sbjct: 246 QGYEYGTAGLAILLVFVYAYLIELLF 271



 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 15/165 (9%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
              +++ +  F   L A P  V+  L + C+    +   + LS+  I    +   F+   
Sbjct: 120 NRIVTTLLSSFFTFLRAVPTPVWVLLALVCLGLGPVPGVVGLSVHAI--AFFSKAFS--Q 175

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV--TGAITACGGAWNASIVSEVAS 528
                PN+  E       +  + +   +LP      +  +G         +A +      
Sbjct: 176 SFENVPNETIEALEVTGASKLQIFFSAVLPSALSQIIAWSGLRFEINFKESAILG----- 230

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +   G+G  I  S +   +    L +L++  +   +    
Sbjct: 231 ----MVGAGGIGYAITNSMQGYEYGTAGLAILLVFVYAYLIELLF 271


>gi|291550510|emb|CBL26772.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Ruminococcus torques L2-14]
          Length = 289

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 72/183 (39%), Gaps = 6/183 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSI-GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++ +F+F ++ G A  +  +   G     F +     +      T++ V + ++ +  + 
Sbjct: 20  LIAVFFFTLLIGFASYVIIKGFTGATPEMFAFARKGSIGNQLFNTIYLVFISLLFSIPLG 79

Query: 402 IPVGIWIGFRPH---ISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        ++  ++   + L++ P+ V   F  +V  V +      L  +L +
Sbjct: 80  VTAGIYLAMYAKKGFLTKFLRICIETLSSLPSIVVGLFGYLVFLVFFGLGKSLLAGALSV 139

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  I        +  P  + + +     T W+   ++++P   P  +TG I A G 
Sbjct: 140 SILAIPVITTTTEDAINGLPGHYLQASLGLGATRWQSIYHVLIPACIPRIMTGVILAAGR 199

Query: 517 AWN 519
            + 
Sbjct: 200 GFG 202



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 57/143 (39%), Gaps = 5/143 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVV 121
              T   +  +++ S+          A   +   L   L   ++ + S+P +    F  +
Sbjct: 61  LFNTIYLVFISLLFSIPLGVTAGIYLAMYAKKGFLTKFLRICIETLSSLPSIVVGLFGYL 120

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +   +  + LA   ++    +  +T +   ++  +P    + S     + WQ  +
Sbjct: 121 VFLVFF--GLGKSLLAGALSVSILAIPVITTTTEDAINGLPGHYLQASLGLGATRWQSIY 178

Query: 182 YLGVPFSMPGLVWNMMMSMSGGW 204
           ++ +P  +P ++  ++++   G+
Sbjct: 179 HVLIPACIPRIMTGVILAAGRGF 201


>gi|257060057|ref|YP_003137945.1| molybdate ABC transporter inner membrane subunit [Cyanothece sp.
           PCC 8802]
 gi|256590223|gb|ACV01110.1| molybdate ABC transporter, inner membrane subunit [Cyanothece sp.
           PCC 8802]
          Length = 604

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 81/228 (35%), Gaps = 43/228 (18%)

Query: 73  LSAMVISLLFTFVYATLAAKS-----RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL- 126
           L A +I+ +  F     AA+       +   ++  I      I  L  L  TVV F+ L 
Sbjct: 12  LRASIIATIIVFFIGMAAARWMLDYKGKGKGIIDSIF-----IAPLV-LPPTVVGFLLLL 65

Query: 127 --------------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                         +   +I    A +          M  +   +   I  ++   +R+ 
Sbjct: 66  LLGNNSPIGQLLYQFEYTIIFTWEATVITATVVAFPLMYRTTLGAFEQIDPNIILAARTL 125

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPLPGIGSYIA 230
             S W+ FW + +P S  GLV   ++S +       A+ M+          +P     I 
Sbjct: 126 GASEWRIFWTVMIPLSYRGLVAATILSFARALGEFGATLMLAGNIPSQTQTMP---VAIF 182

Query: 231 LAIKEQDL-LAILYAMLTMLG---VIFLYDQLLFRPMIVWSNKFRLER 274
            A +  D+  A+++ ++ +     VI + +         W+   +L+R
Sbjct: 183 FAAESGDMKTALIWVLILLFISMSVIIIVNF--------WAETTKLKR 222



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 450 LWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +++      + +++    GA      +    A +   + WR +  +++P  +   V 
Sbjct: 88  WEATVITATVVAFPLMYRTTLGAFEQIDPNIILAARTLGASEWRIFWTVMIPLSYRGLVA 147

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             I +   A      + + + G+I  +T  +   I  + E G     ++ VLI+    ++
Sbjct: 148 ATILSFARALGEFGATLMLA-GNIPSQTQTMPVAIFFAAESGDMKTALIWVLILLFISMS 206

Query: 569 LNRFL 573
           +   +
Sbjct: 207 VIIIV 211


>gi|167581839|ref|ZP_02374713.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 278

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 19/171 (11%)

Query: 93  SRRLGMVLVPI----LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           +RR G   +P+    + I Q+ P +  L   V                  + A+    + 
Sbjct: 104 TRRAGAEFLPVARSVVHIGQTFPPVAVLALAVPAVGFGV--------KPVLIALILYGLL 155

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +  S    L ++P D  + +R   +S  Q+  ++ +P + P ++  + ++       VV
Sbjct: 156 PIFESTIAGLQDVPADAVDAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VV 208

Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +       + +   G+G  I   ++  +   +L   L +  +  L    L
Sbjct: 209 INLGTATIGSTVAAKGLGDVIIAGLQTSNTAFVLQGGLVVALLAVLIYDAL 259



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P D  
Sbjct: 118 VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 173

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++  +   ++ LP  FP  + G   A        +++   +     +   GLG
Sbjct: 174 DAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTATIGSTVAAKGLG 226

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G L++    + +
Sbjct: 227 DVIIAGLQTSNTAFVLQGGLVVALLAVLI 255


>gi|323490093|ref|ZP_08095314.1| ABC transporter permease [Planococcus donghaensis MPA1U2]
 gi|323396389|gb|EGA89214.1| ABC transporter permease [Planococcus donghaensis MPA1U2]
          Length = 308

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+ +        AA       S  +  +L PIL+++  +P + +    LTF      +
Sbjct: 92  TLIATVVAVPIGISAAIYLSEYASENVRRILKPILEVLAGVPTIVYGFFALTFVTPVLQS 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P   I   ++    +    +  +      ++ ++P+ + E + +   + ++  W + +
Sbjct: 152 VFPEIKIFNAISPGIVVGIMIIPMIASLSEDAMSSVPKSIREGALAMGSTKFEVAWKITL 211

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++ G++ ++++++S  
Sbjct: 212 PAALSGIIASVVLAVSRA 229



 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 23/215 (10%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA+++ +P+GI            ++   ++P  ++LA  P  V+         P++ S
Sbjct: 92  TLIATVVAVPIGISAAIYLSEYASENVRRILKPILEVLAGVPTIVYGFFALTFVTPVLQS 151

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 +   +   +++       I        S+ P   +E A +   T +     I L
Sbjct: 152 VFPEIKIFNAISPGIVVGIMIIPMIASLSEDAMSSVPKSIREGALAMGSTKFEVAWKITL 211

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASW------GHIHLRTTGLGAYIAEST--EKGS 551
           P      +   + A   A   +++  +A+       G        + AYI + +  + G 
Sbjct: 212 PAALSGIIASVVLAVSRAIGETMIVSLAAGSTPRFDGDFTGSIQTMTAYIVQVSKGDAGY 271

Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              +   +  +   +      + + L  Y ++  R
Sbjct: 272 GTTIYYSIYAVGFTLFVFTMLM-NILAGYVSKRFR 305


>gi|210610119|ref|ZP_03288281.1| hypothetical protein CLONEX_00467 [Clostridium nexile DSM 1787]
 gi|210152631|gb|EEA83637.1| hypothetical protein CLONEX_00467 [Clostridium nexile DSM 1787]
          Length = 284

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 53/142 (37%), Gaps = 10/142 (7%)

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            +++ F+  + G        A+ A+    +  M  + +  + N+   + E ++    +  
Sbjct: 1   ISMLGFLIPFSGV---GNATAVIALTVYALLPMVRNTHTGIANVDLAILEAAKGMGSTRM 57

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  + + +P +MP ++  +          V  +  +    + I   G+G  I   I   +
Sbjct: 58  QILFKIKLPLAMPVVLSGIR-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNN 110

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               +   L +  +  + D LL
Sbjct: 111 AAMTMVGSLLIALLALIMDFLL 132



 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 7/137 (5%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  +  +    N    + +       ++ N   G +       E A     T  +    
Sbjct: 3   MLGFLIPFSGVGNATAVIALTVYALLPMVRNTHTGIANVDLAILEAAKGMGSTRMQILFK 62

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I LP   P  ++G         N   ++   +     +   GLG  I       +    +
Sbjct: 63  IKLPLAMPVVLSGIR-------NMVTMTIALAGIASFIGAGGLGVAIYRGITTNNAAMTM 115

Query: 557 LGVLIMCCFVLALNRFL 573
           +G L++    L ++  L
Sbjct: 116 VGSLLIALLALIMDFLL 132


>gi|229541510|ref|ZP_04430570.1| phosphate ABC transporter, inner membrane subunit PstA [Bacillus
           coagulans 36D1]
 gi|229325930|gb|EEN91605.1| phosphate ABC transporter, inner membrane subunit PstA [Bacillus
           coagulans 36D1]
          Length = 294

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 76/196 (38%), Gaps = 21/196 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVL 393
           V Y + +F   ++ G+   I  + + ++   F      T+++   +      + + +V+ 
Sbjct: 13  VLYFIAMFIVAILAGLVGYILVKGLPHVSWSFISSPPQTFKEGGGIGPQLFNSFYLLVLT 72

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++I+  I +  GI++      +          ++L++ P+     +VV    +     ++
Sbjct: 73  MVISMPIALGAGIYMAEYARKNRLTDLLRTAIEVLSSLPS-----IVVGLFGFLFFVLSM 127

Query: 451 WLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                ++ G     LFN       V     A     +E   +  ++ W   + ++LP   
Sbjct: 128 GWGFSILSGAFALALFNLPLLVRVVEDSLRAISPAQREAGLALGVSRWETIQSVLLPAAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I A G  + 
Sbjct: 188 PGIITGIILASGRVFG 203



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV---DIVPITLDVHSLPQYA 65
             ++ RI  ++   +A  +V  +  ++ + + +                  +   +    
Sbjct: 3   AKMADRIATSVLYFIAMFIVAILAGLVGYILVKGLPHVSWSFISSPPQTFKEGGGIGPQL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +   ++  MVIS+          A   +  RL  +L   ++++ S+P +    F  ++
Sbjct: 63  FNSFYLLVLTMVISMPIALGAGIYMAEYARKNRLTDLLRTAIEVLSSLPSIVVGLFGFLF 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+         + L+  FA+    +  +   +  SL  I     E   +  +S W+    
Sbjct: 123 FVLSMGWGF--SILSGAFALALFNLPLLVRVVEDSLRAISPAQREAGLALGVSRWETIQS 180

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           + +P ++PG++  ++++  
Sbjct: 181 VLLPAALPGIITGIILASG 199


>gi|332798937|ref|YP_004460436.1| phosphate ABC transporter, inner membrane subunit PstC
           [Tepidanaerobacter sp. Re1]
 gi|332696672|gb|AEE91129.1| phosphate ABC transporter, inner membrane subunit PstC
           [Tepidanaerobacter sp. Re1]
          Length = 288

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSI 110
                        +   +  + +++     +   A        +++  ++ P ++++  I
Sbjct: 46  SPSEGLYGILPMIMGTFTTTLGAIVLGVPLSIFTAIFLVEYAPKKVKKLINPAIELLAGI 105

Query: 111 PILGFLTFTVVY------------FMNLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQS 157
           P + +  F +              F         G  + A   I +  +     +    +
Sbjct: 106 PSVIYGLFGMTMVVPIIREFQKACFGIKQSQIQSGYSILAASIILSIMISPTIINITSDA 165

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           L ++  DL+E S +   + WQ  W++ +P +  G++  +++ M       +A  M+    
Sbjct: 166 LKSVEHDLKEGSLALGATDWQTTWHIILPTAKSGIIAGVVLGMGRAIGETMAVIMVAGNT 225

Query: 218 TVIP----------LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              P             I   +A A     + A+    + +  +I + +    R
Sbjct: 226 VGFPKSIFSPVRSLTGNIAIEMAYAAAGDHMQALFGTGIVLFILIMVINIFALR 279



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 82/246 (33%), Gaps = 29/246 (11%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISS 416
           + + +  +       + +  ++ +   T    +  I++   + I   I++       +  
Sbjct: 34  VGFFNFVFGQKWSPSEGLYGILPMIMGTFTTTLGAIVLGVPLSIFTAIFLVEYAPKKVKK 93

Query: 417 KIQPFAQLLAAFPANVF--------FPLV--------VSCVSYYHLNPNLWLSLLMIFGT 460
            I P  +LLA  P+ ++         P++            S      ++  + +++   
Sbjct: 94  LINPAIELLAGIPSVIYGLFGMTMVVPIIREFQKACFGIKQSQIQSGYSILAASIILSIM 153

Query: 461 QWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               + N       +  +D KE + +   T W+   +IILP      + G +   G A  
Sbjct: 154 ISPTIINITSDALKSVEHDLKEGSLALGATDWQTTWHIILPTAKSGIIAGVVLGMGRAIG 213

Query: 520 ASIVSEVASWGHIHL---------RTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLAL 569
            ++   + +   +             TG  A        G   + + G  +++   ++ +
Sbjct: 214 ETMAVIMVAGNTVGFPKSIFSPVRSLTGNIAIEMAYAAAGDHMQALFGTGIVLFILIMVI 273

Query: 570 NRFLWH 575
           N F   
Sbjct: 274 NIFALR 279


>gi|189467050|ref|ZP_03015835.1| hypothetical protein BACINT_03433 [Bacteroides intestinalis DSM
           17393]
 gi|189435314|gb|EDV04299.1| hypothetical protein BACINT_03433 [Bacteroides intestinalis DSM
           17393]
          Length = 286

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 8/197 (4%)

Query: 11  ISRRIFPNIFDLLAFVLV---IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67
           +S+RI    F LL+  +V     I+  +++          +       +    +      
Sbjct: 7   LSQRIAFGTFRLLSLTVVGILFAILGFIIYKGVGVISWEFLTTAPTDGMTAGGIFPAIVG 66

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   M+ + + +     +        A    +   +  + + +  IP + F  F +  F+
Sbjct: 67  TFYLMIGSALFAFPVGVMSGIYMNEYAPKGWVVRFIRMMTNNLSGIPSIVFGLFGMALFV 126

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N        + LA    +    V  +  +  ++L  IP  L E SR+   +  Q  W++ 
Sbjct: 127 NYMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDTLREGSRALGATKLQTIWHVV 184

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +MP ++  +++++ 
Sbjct: 185 LPMAMPNVITGLILALG 201



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--ASI 399
            +L +    ++  +   I ++ +G I   F        +  G I    V    ++  +++
Sbjct: 17  RLLSLTVVGILFAILGFIIYKGVGVISWEFLTTAPTDGMTAGGIFPAIVGTFYLMIGSAL 76

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNL 450
              PVG+  G           +   I+     L+  P+ VF  F + +        +  L
Sbjct: 77  FAFPVGVMSGIYMNEYAPKGWVVRFIRMMTNNLSGIPSIVFGLFGMALFVNYMGFGDSIL 136

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +       ++        A P+  +E + +   T  +   +++LP   P  +TG 
Sbjct: 137 AGSLTLGLLCVPLVIRTTEEALKAIPDTLREGSRALGATKLQTIWHVVLPMAMPNVITGL 196

Query: 511 ITACG 515
           I A G
Sbjct: 197 ILALG 201


>gi|169829092|ref|YP_001699250.1| ABC transporter permease [Lysinibacillus sphaericus C3-41]
 gi|168993580|gb|ACA41120.1| Probable ABC transporter permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 292

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   M     +S++     A      AK  R+   +   +  +  +P + F    +  F+
Sbjct: 78  SLWLMAVVAPVSIILGVGTAIYLEEYAKKNRINDFIRMNISNLAGVPSIVFGLLGLTIFV 137

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +  + LAA   +    +  +  +  +++  +P +  E S     + WQ    + 
Sbjct: 138 RMM--GLGKSVLAAGLTMSLLILPVIIVAAQEAIRAVPNEQREASYGMGATKWQTILRVV 195

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   +++MS  
Sbjct: 196 LPAAIPGILTGSILAMSRA 214



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 6/194 (3%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
              +       ++ L      +   V  GI + +I ++ N  + + D   V      +++
Sbjct: 21  KVWKTLFFLATTFALVTLAILLYRIVTQGIDYLNIDFLTNFASRFADKAGVKAALIGSLW 80

Query: 389 RVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
            + V+  ++ I+ +   I++     +  I+  I+     LA  P+ VF    L +     
Sbjct: 81  LMAVVAPVSIILGVGTAIYLEEYAKKNRINDFIRMNISNLAGVPSIVFGLLGLTIFVRMM 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   L M       I+        A PN+ +E +     T W+    ++LP   
Sbjct: 141 GLGKSVLAAGLTMSLLILPVIIVAAQEAIRAVPNEQREASYGMGATKWQTILRVVLPAAI 200

Query: 504 PYYVTGAITACGGA 517
           P  +TG+I A   A
Sbjct: 201 PGILTGSILAMSRA 214


>gi|297625853|ref|YP_003687616.1| ABC transporter, permease protein OpuCB [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921618|emb|CBL56172.1| ABC transporter, permease protein OpuCB [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 213

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 78/202 (38%), Gaps = 16/202 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I      +   + +    ++ ++ I+ +     A L     +L  +   I  I  +IP  
Sbjct: 5   IASRWTDIVFRSYQHASLVIQSVFIATVIAIALAVLVTSIPKLEPIANTISTIGLTIPSF 64

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L         L P   IGA  + I   F + +  +  +    L  + R L E +    
Sbjct: 65  ALL-------GILIPLAGIGAVTSMILVAFYAVL-PILRNATVGLLGVDRTLIESAVGMG 116

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +  W  FW + +P + P ++  + +S       + A     +G      PG+GSYI   +
Sbjct: 117 MKPWTIFWRVRLPLAWPIILTGLRVSTQMS-MGIAAVAAYALG------PGLGSYIFTGL 169

Query: 234 KE-QDLLAILYAMLTMLGVIFL 254
            +     A+ YA++  +G++ +
Sbjct: 170 AQIGGKNALNYALVGTIGIVII 191



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  + IA++I I + + +   P +       + +    P+     +++       +   
Sbjct: 23  VIQSVFIATVIAIALAVLVTSIPKLEPIANTISTIGLTIPSFALLGILIPLAGIGAVT-- 80

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               +L+ F     IL N   G         E A    +  W  +  + LP  +P  +TG
Sbjct: 81  --SMILVAFYAVLPILRNATVGLLGVDRTLIESAVGMGMKPWTIFWRVRLPLAWPIILTG 138

Query: 510 AITACGGAW-NASIVSEVASWGHIHLRTTGL----GAYIAESTEKGSFPEVVLGVLIMCC 564
              +   +   A++ +     G      TGL    G         G+   V++ ++    
Sbjct: 139 LRVSTQMSMGIAAVAAYALGPGLGSYIFTGLAQIGGKNALNYALVGTIGIVIIALVADAV 198

Query: 565 FVLA 568
            VL 
Sbjct: 199 LVLI 202


>gi|239627327|ref|ZP_04670358.1| dipeptide transport system permease protein dppB [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239517473|gb|EEQ57339.1| dipeptide transport system permease protein dppB [Clostridiales
           bacterium 1_7_47FAA]
          Length = 320

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 79/206 (38%), Gaps = 19/206 (9%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123
           +T +  +S MV+SL+        AA  ++R      + +  +  S+P   F    ++ F 
Sbjct: 98  KTLIFAVSGMVLSLVIGIPLGVTAAVHQNRFPDYGTMSLALVGTSLPGFWFALVLIMLFS 157

Query: 124 --MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS----LCNIPRDLEEVSRSFRLSGW 177
             +   P   IG     I  I ++    MT    Q     L  I  D   ++++  +   
Sbjct: 158 SRLGWLPAYGIGGIKYWILPIVSTAFAGMTTMARQMRSGMLEVIHADYITMAKAKGVKQK 217

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
              +   +P ++  ++    MS        + +E I        +PG+G YI  A+  +D
Sbjct: 218 AVIYRHALPNALIPVITVASMSFGTSLGGTLIAETI------FSIPGVGVYIVNAVNNRD 271

Query: 238 L----LAILYAMLTMLGVIFLYDQLL 259
                  ++   +T   ++ L D L+
Sbjct: 272 YPVVQGGVILLAITFSIIMLLCDLLI 297



 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 29/208 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           T+   V  ++++ +I IP+G+   +             A +  + P    F   +  +  
Sbjct: 99  TLIFAVSGMVLSLVIGIPLGVTAAVHQNRFPDYGTMSLALVGTSLPG---FWFALVLIML 155

Query: 444 YHLNPNLWLSLLMIFGTQW--YILFNVIAGASAFPN------------DFKEVASSFHIT 489
           +        +  +     W   I+    AG +                D+  +A +  + 
Sbjct: 156 FSSRLGWLPAYGIGGIKYWILPIVSTAFAGMTTMARQMRSGMLEVIHADYITMAKAKGVK 215

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                    LP      +T A  + G +   ++++E            G+G YI  +   
Sbjct: 216 QKAVIYRHALPNALIPVITVASMSFGTSLGGTLIAETI------FSIPGVGVYIVNAVNN 269

Query: 550 GSFPEVVLGVLIM----CCFVLALNRFL 573
             +P V  GV+++       +L  +  +
Sbjct: 270 RDYPVVQGGVILLAITFSIIMLLCDLLI 297


>gi|254476625|ref|ZP_05090011.1| phosphate transport system permease protein 2 [Ruegeria sp. R11]
 gi|214030868|gb|EEB71703.1| phosphate transport system permease protein 2 [Ruegeria sp. R11]
          Length = 448

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 68/194 (35%), Gaps = 9/194 (4%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           + I P   DL+  ++  G++    +    T             + V  L      +   M
Sbjct: 178 KSISPEQLDLVDALVSAGVVEKTFNLAFITGADASDARPEAAGMGVSMLG-----SLFMM 232

Query: 73  LSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           L  + ++L      +      A    L  ++   +  + ++P + F    +  F+N    
Sbjct: 233 LVVLALALPIGVAASIYLEEFAPKNWLTDIIEVNISNLAAVPSIVFGILGLAVFINYM-H 291

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             + A L     +    +  +  S   +L  +P  + + +     S  Q  ++  +P + 
Sbjct: 292 LPMSAPLVGGLVLTLMTLPTVIISTRAALKAVPPSIRDAALGVGASRMQAVFHHVLPLAA 351

Query: 190 PGLVWNMMMSMSGG 203
           PG++   ++ ++  
Sbjct: 352 PGILTGTIIGLAQA 365



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              ++  I+     LAA P+ VF  
Sbjct: 221 MGVSMLGSLFMMLVVLALALPIGVAASIYLEEFAPKNWLTDIIEVNISNLAAVPSIVFGI 280

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +  ++  L   L++   T   ++ +  A   A P   ++ A     +  +
Sbjct: 281 LGLAVFINYMHLPMSAPLVGGLVLTLMTLPTVIISTRAALKAVPPSIRDAALGVGASRMQ 340

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 341 AVFHHVLPLAAPGILTGTIIGLAQA 365


>gi|171779496|ref|ZP_02920460.1| hypothetical protein STRINF_01341 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282113|gb|EDT47544.1| hypothetical protein STRINF_01341 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 295

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  +VIS+  +          AK  R    +   ++I+ S+P +    F  + F+
Sbjct: 65  SLFLLVITLVISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++   L N+     E   +  LS W+   ++ 
Sbjct: 125 VQFQYGFSIISGALALTVFN--LPQMTRNVEDGLRNVHHTQLEAGLALGLSRWETVVHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++P +V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 IPEALPSIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 74/200 (37%), Gaps = 18/200 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---------CITMF 388
           ++   +     + +   +   +A   +  +VN   + +  ++              I ++
Sbjct: 4   KKFDKLATGILYTIAGIIVAILASLLLYILVNGLPHVNWSFLTGKSSSYEAGGGIGIQLY 63

Query: 389 RVVVLIIIASIIWIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANV--FFPLVVS 439
             + L++I  +I IP+    GI++                 ++L++ P+ V   F  ++ 
Sbjct: 64  NSLFLLVITLVISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIF 123

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V + +    +  +L +       +  NV  G     +   E   +  ++ W    ++++
Sbjct: 124 VVQFQYGFSIISGALALTVFNLPQMTRNVEDGLRNVHHTQLEAGLALGLSRWETVVHVVI 183

Query: 500 PGIFPYYVTGAITACGGAWN 519
           P   P  VTG + A G  + 
Sbjct: 184 PEALPSIVTGIVLASGRIFG 203


>gi|150021585|ref|YP_001306939.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
 gi|149794106|gb|ABR31554.1| binding-protein-dependent transport systems inner membrane
           component [Thermosipho melanesiensis BI429]
          Length = 426

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 7/193 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI-LDIMQSIPILGF-LTFTVVY 122
             R+    L  + ISL    +     A+    G   + + +  ++  P +   +   ++ 
Sbjct: 224 LMRSIQVALLTVAISLTIGGMAGYAFARYNFKGKNFLKLSVLFVRMFPGISIAMPMVIIL 283

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +  K IG  L          +W +T S++  +     +LEE +  F  +    F+ 
Sbjct: 284 INMGFYDKPIGLSLVYSVGQIGMTIW-ITASIFMGIST---ELEEAAMIFGTTRIGAFFK 339

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + PGL  + M +  G W     + ++   +   P+  +   +  A    +L A  
Sbjct: 340 VTLPLAFPGLAASAMYAFIGSWSETAQAIVLTQFNPTFPVV-VYQTLVGAKGLINLTAAG 398

Query: 243 YAMLTMLGVIFLY 255
              L +  VIF  
Sbjct: 399 GVSLALPAVIFTL 411



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 12/198 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISS-KIQPFAQLLAAFPANVF 433
           V    W   +   +V +L +  S+ I    G             ++     +  FP    
Sbjct: 216 VSSNAWPALMRSIQVALLTVAISLTIGGMAGYAFARYNFKGKNFLKLSVLFVRMFPGISI 275

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P+V+  ++    +  + LSL+   G     ++   +       + +E A  F  T   
Sbjct: 276 AMPMVIILINMGFYDKPIGLSLVYSVGQIGMTIWITASIFMGISTELEEAAMIFGTTRIG 335

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN----ASIVSEV-----ASWGHIHLRTTGLGAYI 543
            +  + LP  FP     A+ A  G+W+    A ++++             +   GL    
Sbjct: 336 AFFKVTLPLAFPGLAASAMYAFIGSWSETAQAIVLTQFNPTFPVVVYQTLVGAKGLINLT 395

Query: 544 AESTEKGSFPEVVLGVLI 561
           A      + P V+  ++I
Sbjct: 396 AAGGVSLALPAVIFTLII 413


>gi|82777388|ref|YP_403737.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|309788004|ref|ZP_07682613.1| inner membrane ABC transporter permease protein yehW [Shigella
           dysenteriae 1617]
 gi|81241536|gb|ABB62246.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|308924138|gb|EFP69636.1| inner membrane ABC transporter permease protein yehW [Shigella
           dysenteriae 1617]
          Length = 243

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 9   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 68

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 69  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGV 126

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A       VA    ++  +  R + LP   P  + G  T+    
Sbjct: 127 L----PVLQATLAGLGAIDASVTVVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIIN 182

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + V+         +  + LG  I       +   V+ G L++    +  NR     +
Sbjct: 183 IGTATVA-------STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIANRLFERLV 235

Query: 578 YLYGT 582
                
Sbjct: 236 QALSQ 240



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 65/206 (31%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 109

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   +  V++   +S  Q+   
Sbjct: 110 IGFGLQP--------AIIALILYGVLPVLQATLAGLGAIDASVTVVAKGMGMSRGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGVRTSVIINIGTATVASTVGAST-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + ++L  R +   S 
Sbjct: 215 QGALLVALAAIIANRLFERLVQALSQ 240


>gi|289705262|ref|ZP_06501661.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289558012|gb|EFD51304.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 250

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 88/251 (35%), Gaps = 17/251 (6%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69
            I+R    +  D L  + +  ++  LL G         + D+    L   ++ +      
Sbjct: 1   MIARLRAASAEDRLLLIGLPLLVAALLIGWTVWVRGAALDDVEARLLTWPTVLRLTGEHL 60

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
             +  + V+ +        L ++   RR   V + + +  Q+ P++G +    + +   +
Sbjct: 61  ALVGVSTVLVVATAVPLGVLLSRPAARRFTPVAMGLANAGQAAPVIGVIVLLAMAWGFGF 120

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V+   L A   +          +    L  +   + E +R   +S  Q    + +P 
Sbjct: 121 RVAVLALSLYAFLPVLA--------NTLAGLRGVDPTVVEAARGMGMSPLQTLLRVELPL 172

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P ++  +  ++      +V +       T I   G+G  I   I       ++   + 
Sbjct: 173 ALPVIMAGLRTAL----VLLVGTGAFA---TFIDAGGLGLLIQTGIVLFRFPLLVSGAIL 225

Query: 248 MLGVIFLYDQL 258
           +  +  + + +
Sbjct: 226 VAALALMIEWI 236



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 74/240 (30%), Gaps = 11/240 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--YQDVLYVIWLGCITMFRV 390
           +L +      +L I    +V  + IG      G  ++           V+ L    +  V
Sbjct: 4   RLRAASAEDRLLLIGLPLLVAALLIGWTVWVRGAALDDVEARLLTWPTVLRLTGEHLALV 63

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            V  ++     +P+G+        + +  P A  LA          V+  ++        
Sbjct: 64  GVSTVLVVATAVPLGVL--LSRPAARRFTPVAMGLANAGQAAPVIGVIVLLAMAWGFGFR 121

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L +       +L N +AG         E A    ++  +    + LP   P  + G 
Sbjct: 122 VAVLALSLYAFLPVLANTLAGLRGVDPTVVEAARGMGMSPLQTLLRVELPLALPVIMAGL 181

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
            TA          +         +   GLG  I        FP +V G +++    L + 
Sbjct: 182 RTALVLLVGTGAFA-------TFIDAGGLGLLIQTGIVLFRFPLLVSGAILVAALALMIE 234


>gi|325264556|ref|ZP_08131286.1| multiple sugar-binding transport system permease protein MsmF
           [Clostridium sp. D5]
 gi|324030218|gb|EGB91503.1| multiple sugar-binding transport system permease protein MsmF
           [Clostridium sp. D5]
          Length = 290

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 4/139 (2%)

Query: 132 IGAELAAIFAIFTSQVWNM----TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           +G    A+F I   ++W             L ++P +  E ++    SGW  F ++ +P 
Sbjct: 148 LGERWPAVFVITLCEIWRSLGHGIIITLAGLQSVPDEYLEAAKVDGASGWNLFRHITLPL 207

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            MP +  N++ S+  G        ++ +G         G+ I   +        +   L 
Sbjct: 208 IMPTVNVNILFSLIFGLKMFDLVYILTLGGPGHDTETFGTLIMNEMANGRYSHSVATNLI 267

Query: 248 MLGVIFLYDQLLFRPMIVW 266
              ++ +   L  +    W
Sbjct: 268 FTVILVIVAILFQKFSARW 286



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%)

Query: 446 LNPNLWLSLLMIFGTQWYIL----FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L        ++     W  L       +AG  + P+++ E A     +GW  +R+I LP 
Sbjct: 148 LGERWPAVFVITLCEIWRSLGHGIIITLAGLQSVPDEYLEAAKVDGASGWNLFRHITLPL 207

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           I P      + +         +  + + G     T   G  I      G +   V   LI
Sbjct: 208 IMPTVNVNILFSLIFGLKMFDLVYILTLGGPGHDTETFGTLIMNEMANGRYSHSVATNLI 267

Query: 562 MCCFVLALNRFL 573
               ++ +    
Sbjct: 268 FTVILVIVAILF 279


>gi|218246981|ref|YP_002372352.1| molybdate ABC transporter inner membrane subunit [Cyanothece sp.
           PCC 8801]
 gi|218167459|gb|ACK66196.1| molybdate ABC transporter, inner membrane subunit [Cyanothece sp.
           PCC 8801]
          Length = 604

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 81/228 (35%), Gaps = 43/228 (18%)

Query: 73  LSAMVISLLFTFVYATLAAKS-----RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL- 126
           L A +I+ +  F     AA+       +   ++  I      I  L  L  TVV F+ L 
Sbjct: 12  LRASIIATIIVFFIGMAAARWMLDYKGKGKGIIDSIF-----IAPLV-LPPTVVGFLLLL 65

Query: 127 --------------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                         +   +I    A +          M  +   +   I  ++   +R+ 
Sbjct: 66  LLGNNSPIGQLLYQFEYTIIFTWEATVITATVVAFPLMYRTTLGAFEQIDPNIILAARTL 125

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPLPGIGSYIA 230
             S W+ FW + +P S  GLV   ++S +       A+ M+          +P     I 
Sbjct: 126 GASEWRIFWTVMIPLSYRGLVAATILSFARALGEFGATLMLAGNIPSQTQTMP---VAIF 182

Query: 231 LAIKEQDL-LAILYAMLTMLG---VIFLYDQLLFRPMIVWSNKFRLER 274
            A +  D+  A+++ ++ +     VI + +         W+   +L+R
Sbjct: 183 FAAESGDMRTALIWVLILLFISMSVIIIVNF--------WAETTKLKR 222



 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 450 LWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +++      + +++    GA      +    A +   + WR +  +++P  +   V 
Sbjct: 88  WEATVITATVVAFPLMYRTTLGAFEQIDPNIILAARTLGASEWRIFWTVMIPLSYRGLVA 147

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             I +   A      + + + G+I  +T  +   I  + E G     ++ VLI+    ++
Sbjct: 148 ATILSFARALGEFGATLMLA-GNIPSQTQTMPVAIFFAAESGDMRTALIWVLILLFISMS 206

Query: 569 LNRFL 573
           +   +
Sbjct: 207 VIIIV 211


>gi|116250316|ref|YP_766154.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115254964|emb|CAK06038.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 440

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  +V++L      +      A   +L  ++   ++ + ++P +
Sbjct: 214 EAAGLGVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 273

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 274 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 332

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 333 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 362



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + L++I  ++ +P+G+              ++  I+     LAA P+ V+  L
Sbjct: 219 GVALIGSLYLMLIVLVLALPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLL 278

Query: 437 VVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +S    +   P   +L   L++   T   I+    A   A P   +  A     +  + 
Sbjct: 279 GLSVFINFIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQM 338

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 339 VFHHVLPLAMPGILTGTIIGLAHA 362


>gi|52081761|ref|YP_080552.1| binding-protein dependent transport system inner membrane protein
           [Bacillus licheniformis ATCC 14580]
 gi|52787147|ref|YP_092976.1| YusB [Bacillus licheniformis ATCC 14580]
 gi|319647677|ref|ZP_08001895.1| YusB protein [Bacillus sp. BT1B_CT2]
 gi|52004972|gb|AAU24914.1| Binding-protein-dependent transport systems inner membrane
           component [Bacillus licheniformis ATCC 14580]
 gi|52349649|gb|AAU42283.1| YusB [Bacillus licheniformis ATCC 14580]
 gi|317390018|gb|EFV70827.1| YusB protein [Bacillus sp. BT1B_CT2]
          Length = 222

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQ 108
           D+  L +    T      +++ + +   +   L          ++R +  V+  I+++ +
Sbjct: 10  DMEQLWEATYETIYMTGISLLFAFIIGVILGMLLYLTSKGNIWQNRVVNGVISAIVNVFR 69

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           SIP    L   ++ F       ++G   AA+ A+  +        +  +L  + + + E 
Sbjct: 70  SIP-FIILIILLLGFTKFLMNTILGPN-AALPALIIASAPFYARLVEIALREVDKGVIEA 127

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           ++S         + + +P SMP L+  + ++       ++ S  +      I   G+G+ 
Sbjct: 128 AKSMGAKTSTIIFKVLLPESMPALISGITVTA----IALIGSTAMAGA---IGSGGLGNL 180

Query: 229 I-ALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 +  +   IL A + +L ++F+   +
Sbjct: 181 AYVNGFQMNNPDIILIATIFILAIVFIIQFI 211



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 20/196 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPL- 436
           T++   + ++ A II + +G+         I     ++  I     +  + P  +   L 
Sbjct: 21  TIYMTGISLLFAFIIGVILGMLLYLTSKGNIWQNRVVNGVISAIVNVFRSIPFIILIILL 80

Query: 437 --VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    L PN  L  L+I    +Y    V            E A S         
Sbjct: 81  LGFTKFLMNTILGPNAALPALIIASAPFYARL-VEIALREVDKGVIEAAKSMGAKTSTII 139

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  ++G          ++ ++     G       GLG     +  + + P+
Sbjct: 140 FKVLLPESMPALISGITVTAIALIGSTAMAGAIGSG-------GLGNLAYVNGFQMNNPD 192

Query: 555 VVL-GVLIMCCFVLAL 569
           ++L   + +   V  +
Sbjct: 193 IILIATIFILAIVFII 208


>gi|256830446|ref|YP_003159174.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579622|gb|ACU90758.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfomicrobium baculatum DSM 4028]
          Length = 386

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 58/135 (42%), Gaps = 8/135 (5%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + I+ +F+F    +AA          RL  ++   ++ + +IP + F    +  F+N + 
Sbjct: 175 LGITFIFSFPAGVMAAIYLEEFAPDNRLMHIVEVNINNLAAIPSILFGLLGLAIFIN-FM 233

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G    + L     +    +  +  S   ++  IP  + E + +   + WQ  W   +P S
Sbjct: 234 GLPRSSALVGGLTLALMTLPVIIISTRAAIRAIPDSIREGALALGATHWQVVWDHILPLS 293

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++   ++ ++  
Sbjct: 294 LPGILTGTIIGLARA 308



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 6/151 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFP 429
             ++  ++     T++ + +  I +    +   I++        +   ++     LAA P
Sbjct: 158 LAEMAGILSAAVGTLYLLGITFIFSFPAGVMAAIYLEEFAPDNRLMHIVEVNINNLAAIP 217

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           + +F  L ++    +   P        L +   T   I+ +  A   A P+  +E A + 
Sbjct: 218 SILFGLLGLAIFINFMGLPRSSALVGGLTLALMTLPVIIISTRAAIRAIPDSIREGALAL 277

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             T W+     ILP   P  +TG I     A
Sbjct: 278 GATHWQVVWDHILPLSLPGILTGTIIGLARA 308


>gi|317484885|ref|ZP_07943775.1| phosphate ABC transporter [Bilophila wadsworthia 3_1_6]
 gi|316923867|gb|EFV45063.1| phosphate ABC transporter [Bilophila wadsworthia 3_1_6]
          Length = 295

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 25/255 (9%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I  F  + G+ +   +    ++  H  Y       +     +   + + I+AS I +P+G
Sbjct: 28  IMLFLFMEGLPLFADYPLWDFLTGHLWYPTSEPPEFGIFPLIMGSLAVTILASCIAVPLG 87

Query: 406 IWIGFR------PHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLW 451
           I                 ++PF +LLAA P+ V          P +            L 
Sbjct: 88  IMTAAYLAEIAASRTRRIVKPFVELLAALPSVVIGFFGMVIVAPFLQDWFGADTGLNLLN 147

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L++ F +   I         A P   +E + +   T W     +++P       T  +
Sbjct: 148 AALMLAFMSVPTICSVAEDALFAVPRTLREASLALGATRWETLIRVVIPSALSGIGTAVM 207

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT----------GLGAYIAESTEKGS-FPEVVLGVL 560
                A   ++V  + + G   +  +           + A +AE+  +G  +  +    +
Sbjct: 208 LGMSRAIGETMVVLMVAGGAAIIPLSIFDPVRPMPASIAAEMAEAPFRGDHYFALFATGI 267

Query: 561 IMCCFVLALNRFLWH 575
           ++  F L  N   + 
Sbjct: 268 VLFLFTLLFNMLAFR 282



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 21/210 (10%)

Query: 73  LSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-F 123
           L+  +++         + A         R   ++ P ++++ ++P  ++GF    +V  F
Sbjct: 73  LAVTILASCIAVPLGIMTAAYLAEIAASRTRRIVKPFVELLAALPSVVIGFFGMVIVAPF 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +  + G   G  L     +          S+   +L  +PR L E S +   + W+    
Sbjct: 133 LQDWFGADTGLNLLNAALMLAFMSVPTICSVAEDALFAVPRTLREASLALGATRWETLIR 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----------GIGSYIALA 232
           + +P ++ G+   +M+ MS      +   M+  G  +IPL            I + +A A
Sbjct: 193 VVIPSALSGIGTAVMLGMSRAIGETMVVLMVAGGAAIIPLSIFDPVRPMPASIAAEMAEA 252

Query: 233 -IKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +     A+    + +     L++ L FR
Sbjct: 253 PFRGDHYFALFATGIVLFLFTLLFNMLAFR 282


>gi|313888751|ref|ZP_07822413.1| putative D-methionine transport system permease protein MetI
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845228|gb|EFR32627.1| putative D-methionine transport system permease protein MetI
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 217

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPILGFLTF 118
           +T + ++++ +I+LL       +   +R        ++  VL  I++I++S P    L  
Sbjct: 14  QTLIMVIASTIIALLIGLPLGIILTTTRPGGLTESLKVYSVLDGIINILRSFP-FVILMI 72

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V     L  GK  G   A I  +  S    +   M   L  +   + E ++S   S  +
Sbjct: 73  VVFPLSRLIVGKSYGT-AAMIIPLSVSAAPFVARLMEGYLIQVDSGIIEAAKSMGSSKRE 131

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
             + + +P +MP +V  + M++
Sbjct: 132 IIFKVLIPEAMPMIVTGITMTV 153



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 21/200 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP--------HISSKIQPFAQLLAAFPANVF---- 433
           T+  V+   IIA +I +P+GI +             + S +     +L +FP  +     
Sbjct: 15  TLIMVIASTIIALLIGLPLGIILTTTRPGGLTESLKVYSVLDGIINILRSFPFVILMIVV 74

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           FPL    V   +    + + L +        L           +   E A S   +    
Sbjct: 75  FPLSRLIVGKSYGTAAMIIPLSVSAAPFVARLMEGY--LIQVDSGIIEAAKSMGSSKREI 132

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              +++P   P  VTG           S ++ V   G +       G        + + P
Sbjct: 133 IFKVLIPEAMPMIVTGITMTVINVIGYSAMAGVMGGGGLGDVANRYGY-------QRNEP 185

Query: 554 EVVLGVLIMCCFVLALNRFL 573
            ++   +++   ++ + +F+
Sbjct: 186 LILWSAVLVIIILVQIVQFV 205


>gi|170758356|ref|YP_001786921.1| methionine ABC transporter permease [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405345|gb|ACA53756.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 229

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTF 118
            T   ++ A ++S +  F+ A +           ++ +  +L  I++I++S+P    L  
Sbjct: 29  ETIYMIIIATILSFVIGFILAIVLVVTDEKGIKPNKIIYGILSAIINILRSVP-FIILAV 87

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F     G  IG   AAI  +  +    +   +  SL  +   L E ++SF  S  Q
Sbjct: 88  AIIPFTRSVVGTSIGKN-AAIVPLIIASAPFIARLIESSLKEVNPSLIEAAKSFGASNIQ 146

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
             + + V  ++P +  N+ ++
Sbjct: 147 IIFKVMVKEAIPSINLNLTLA 167



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 13/232 (5%)

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411
           +         +    +           +  +   T+   V+  I+A ++ +     I   
Sbjct: 4   ILSGGKYKVNEITTLMKQIIFPSLWETIYMIIIATILSFVIGFILAIVLVVTDEKGIKPN 63

Query: 412 PHISSKIQPFAQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             I   +     +L + P    A    P   S V    +  N  +  L+I    + I   
Sbjct: 64  KIIYGILSAIINILRSVPFIILAVAIIPFTRSVVG-TSIGKNAAIVPLIIASAPF-IARL 121

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           + +          E A SF  +  +    +++    P        A       + ++   
Sbjct: 122 IESSLKEVNPSLIEAAKSFGASNIQIIFKVMVKEAIPSINLNLTLATITILGLTAMAGAV 181

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
             G +       G      T       ++   L++   ++ + +F+ + +Y 
Sbjct: 182 GAGGLGAVGLTYGYQSFNDT-------IMYTTLVLLVIIVGIIQFVGNVIYK 226


>gi|116627795|ref|YP_820414.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101072|gb|ABJ66218.1| ABC-type phosphate transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 294

 Score = 56.9 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 6/203 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +   ++  +I  +L           +  +         +      +   ++  ++IS+  
Sbjct: 20  IIVTILAALILYILVRGIPHISWSFLTSMSSSHKAGGGIGVQLYNSLFLLVITLIISVPL 79

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +          AK  RL   +   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  SMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPSVVVGLFGYLIFVVQFQYGFSILSGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  MT ++  SL  +     E   +  LS W+   ++ +P ++PG+V  +++S
Sbjct: 140 LTVFN--LPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICHVVIPEALPGIVTGIVLS 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPL 222
            SG  F   A+ +   G +   L
Sbjct: 198 -SGRIFGEAAALIYTAGQSAPAL 219



 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400
           ++      ++  + + I  + I +I   F  +            + ++  + L++I  II
Sbjct: 16  VIAGIIVTILAALILYILVRGIPHISWSFLTSMSSSHKAGGGIGVQLYNSLFLLVITLII 75

Query: 401 WIPV----GIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++        +S+ ++   ++L++ P+     +VV    Y          
Sbjct: 76  SVPLSMGAGIFLSEYAKKGRLSNFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFQYG 130

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYY 506
             ++ G     +FN+        +  +       E   +  ++ W    ++++P   P  
Sbjct: 131 FSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICHVVIPEALPGI 190

Query: 507 VTGAITACGGAWN 519
           VTG + + G  + 
Sbjct: 191 VTGIVLSSGRIFG 203


>gi|318060344|ref|ZP_07979067.1| maltose permease [Streptomyces sp. SA3_actG]
          Length = 305

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRMLSAM 76
           +    +V      L  G  +   P  I+D + ++     L+      +   T +  L   
Sbjct: 51  VALVPVVWLAFLSLGPGKDDYLHPGRILDRLTLSNYSYVLEHTKFWDWLQSTLIVALGTT 110

Query: 77  VISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ + F        ++ R      L+ +L + Q+ PI   +      F  L    +I + 
Sbjct: 111 LLGVAFAATTGYAVSRMRFPGQRPLMWVLLLTQAFPIAVLIVPMYEIFSELG---LIDSY 167

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              I    T+ +    + +      IP +++E  R   LS +  FW L +P + PGL   
Sbjct: 168 FGVILLNCTTAIPYSAWLLKGYFDTIPFEIDEAGRIDGLSPFGTFWRLVLPLARPGLAVA 227

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIP-LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              +    W  V  +   ++ D       G+ ++++    + +L+A    ++ +   IF 
Sbjct: 228 AFYTFITAWAEVAFASTFLLDDEKYTFAVGLQTFVSEHDAQWNLMAATAVLIAVPVTIFF 287

Query: 255 Y 255
           Y
Sbjct: 288 Y 288


>gi|307592099|ref|YP_003899690.1| phosphate ABC transporter inner membrane subunit PstA [Cyanothece
           sp. PCC 7822]
 gi|306985744|gb|ADN17624.1| phosphate ABC transporter, inner membrane subunit PstA [Cyanothece
           sp. PCC 7822]
          Length = 311

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 4/144 (2%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L        + +  A+ +SL    + A   +K+   G  L   LD++ S+P + F  F  
Sbjct: 93  LVSTLMLLIICLAVAVPLSLGTAILLAEYTSKNHWFGRWLRISLDMLASVPSIVFGLFGN 152

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             F  +     +G  + +        +  M   SM + L  +P +    + S  +S    
Sbjct: 153 AVFCIILG---MGFSILSGGLTLACMILPMLIRSMEEGLRMVPDEYRLGAASLGISRIST 209

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGG 203
              L +P ++P L+  +++ +   
Sbjct: 210 LINLLLPAAVPSLIAGLILGIGRA 233



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 65/190 (34%), Gaps = 12/190 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V + + I    +   +   +    +  +   F   +       G I    V  L+++   
Sbjct: 44  VVWTVAISVTAIFLCICADLVIHGLSKLSWQFLLSEPENAGREGGIASILVSTLMLLIIC 103

Query: 400 IWIPVGIWIGF----------RPHISSKIQPFAQLLAAFPANVFFPLVVSCV-SYYHLNP 448
           + + V + +G                  ++    +LA+ P+ VF     +       +  
Sbjct: 104 LAVAVPLSLGTAILLAEYTSKNHWFGRWLRISLDMLASVPSIVFGLFGNAVFCIILGMGF 163

Query: 449 NLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++    L +      +L  ++  G    P++++  A+S  I+       ++LP   P  +
Sbjct: 164 SILSGGLTLACMILPMLIRSMEEGLRMVPDEYRLGAASLGISRISTLINLLLPAAVPSLI 223

Query: 508 TGAITACGGA 517
            G I   G A
Sbjct: 224 AGLILGIGRA 233


>gi|302531462|ref|ZP_07283804.1| quaternary amine ABC transporter permease [Streptomyces sp. AA4]
 gi|302440357|gb|EFL12173.1| quaternary amine ABC transporter permease [Streptomyces sp. AA4]
          Length = 259

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 8/176 (4%)

Query: 30  GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL 89
            ++ +++           +      TL+  SL           +    I +L       +
Sbjct: 28  AVVVLIVAATLAWVFASGLTATEKETLNATSLLTALRDHVAMTVVVTAIVVLVAVPLGII 87

Query: 90  AAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
             +   + L  V + I +I Q+ P LG L   V++F+  + G V G  +AA+   F S +
Sbjct: 88  VTRPWAKWLAPVFLAIANIGQAAPALGVL---VLWFI--FTGAVGGLWVAALPLAFYSLL 142

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             +  +    +  +   L +  R   +S  +  W +  P ++P ++  +  S+   
Sbjct: 143 -PVLRNTMVGIQQVDPSLIDAGRGIGMSAQKVLWRVEFPLAVPLILAGLRTSLVLA 197



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 6/135 (4%)

Query: 403 PVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFG 459
           P+GI +   +   ++      A +  A PA     ++V    +      LW++ L + F 
Sbjct: 83  PLGIIVTRPWAKWLAPVFLAIANIGQAAPALG---VLVLWFIFTGAVGGLWVAALPLAFY 139

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   +L N + G         +      ++  +    +  P   P  + G  T+   A  
Sbjct: 140 SLLPVLRNTMVGIQQVDPSLIDAGRGIGMSAQKVLWRVEFPLAVPLILAGLRTSLVLAVG 199

Query: 520 ASIVSEVASWGHIHL 534
            +      + G   L
Sbjct: 200 TATFGMFVNAGGFGL 214


>gi|159044084|ref|YP_001532878.1| phosphate transport system permease [Dinoroseobacter shibae DFL 12]
 gi|157911844|gb|ABV93277.1| phosphate transport system permease protein [Dinoroseobacter shibae
           DFL 12]
          Length = 450

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   M+  + ++L      +      A   RL  ++   +  + ++P +
Sbjct: 220 EAAGLGVAIMGSLYMMMIVLCLALPIGVAASIYLEEFAPKNRLTDLIEVNISNLAAVPSI 279

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N + G    A +     +    +  +  S   SL ++P  + + +    
Sbjct: 280 VFGILGLAIFIN-FAGLPQSAPIVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVG 338

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P + PG++   ++ ++  
Sbjct: 339 ASKMQAVFHNVLPLAAPGILTGTIIGLAQA 368



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 26/232 (11%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISS 416
            G+  N            LG   M  + +++I+  +  +P+G+              ++ 
Sbjct: 206 WGFFTNPDASGQRPEAAGLGVAIMGSLYMMMIVLCL-ALPIGVAASIYLEEFAPKNRLTD 264

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGAS 473
            I+     LAA P+ VF  L ++    +   P        L++   T   I+ +  A   
Sbjct: 265 LIEVNISNLAAVPSIVFGILGLAIFINFAGLPQSAPIVGGLVLTLMTLPTIIISTRASLK 324

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA---SIVSEVASWG 530
           + P   ++ A     +  +   + +LP   P  +TG I     A       ++  + ++ 
Sbjct: 325 SVPPSIRDAALGVGASKMQAVFHNVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVAFV 384

Query: 531 HIHLRTTGLGAY---------IAESTEKGS---FPEVVLGVLIMCCFVLALN 570
             +      G +         I   T++            ++++  F+L +N
Sbjct: 385 REYPAAPPEGFFDPASALPVQIYNWTQRSDPAFVERASGAIIVLLVFLLIMN 436


>gi|73669286|ref|YP_305301.1| phosphate ABC transporter permease [Methanosarcina barkeri str.
           Fusaro]
 gi|72396448|gb|AAZ70721.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Methanosarcina barkeri str. Fusaro]
          Length = 307

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 72/183 (39%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L     V+ I+  +++          + ++  + +    +      T   ++ +M+I+L 
Sbjct: 43  LTVVGFVLIILAYIIYNGYSAINVEFLTEMPRLMMTQGGIYPAIVGTVYLIIGSMIIALP 102

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              + A      A   R   ++   ++ +   P + F  F +  F+  +         + 
Sbjct: 103 MGVMAAIYLNEYAGETRTTWLIEMAINNLAGTPSVIFGLFGMALFVKYFGFGPSILSASL 162

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             ++    V  +  S  ++L  +P +  E S +  +S WQ   +  +P ++PG++   ++
Sbjct: 163 TLSLLIIPV--IIRSTEEALIAVPNEYRESSLALGVSKWQTIRHAVLPAAIPGIITGSIL 220

Query: 199 SMS 201
           S+ 
Sbjct: 221 SIG 223



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 11/178 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--ASIIWIPVGI 406
              V  +   I +     I   F  +    ++  G I    V  + +I  + II +P+G+
Sbjct: 46  VGFVLIILAYIIYNGYSAINVEFLTEMPRLMMTQGGIYPAIVGTVYLIIGSMIIALPMGV 105

Query: 407 WIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLSLLMIF 458
                          +  I+     LA  P+ +F    ++    Y+   P++  + L + 
Sbjct: 106 MAAIYLNEYAGETRTTWLIEMAINNLAGTPSVIFGLFGMALFVKYFGFGPSILSASLTLS 165

Query: 459 GTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                ++  +      A PN+++E + +  ++ W+  R+ +LP   P  +TG+I + G
Sbjct: 166 LLIIPVIIRSTEEALIAVPNEYRESSLALGVSKWQTIRHAVLPAAIPGIITGSILSIG 223


>gi|300782033|ref|YP_003762324.1| proline/glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299791547|gb|ADJ41922.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 259

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 65/216 (30%), Gaps = 6/216 (2%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380
            V+   F        + +   +   I    +V    + +    +            L+  
Sbjct: 3   AVVDTGFSTESGSKRAERVRLFAQPIVVLVIVAVTLVAVFSSGLNATEKETLNASSLFTA 62

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF--PANVFFPLVV 438
               + M  VV  I++  ++ +P+G+ +      +  + P    +A     A     LV+
Sbjct: 63  LWDHLLMTLVVTAIVV--LVAVPLGVIV--TRPWARFLAPVFLAIANIGQAAPALGVLVL 118

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +           +L + F +   +L N + G         +      ++       + 
Sbjct: 119 WFIVTGATGGIWVAALPLAFYSLLPVLRNTMVGIQQVDPALIDAGRGIGMSATAVLWRVE 178

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           LP   P  + G  T+   A   +      + G   L
Sbjct: 179 LPLAVPLILAGLRTSLVLAVGTATFGMFVNAGGFGL 214



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 8/151 (5%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPI 112
           TL+  SL        L  L    I +L       +  +   R L  V + I +I Q+ P 
Sbjct: 53  TLNASSLFTALWDHLLMTLVVTAIVVLVAVPLGVIVTRPWARFLAPVFLAIANIGQAAPA 112

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           LG L   V++F+        G    A   +    +  +  +    +  +   L +  R  
Sbjct: 113 LGVL---VLWFIVTGA---TGGIWVAALPLAFYSLLPVLRNTMVGIQQVDPALIDAGRGI 166

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +S     W + +P ++P ++  +  S+   
Sbjct: 167 GMSATAVLWRVELPLAVPLILAGLRTSLVLA 197


>gi|217960356|ref|YP_002338916.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus AH187]
 gi|217066276|gb|ACJ80526.1| alkanesulfonates transport system permease; sulfonate ABC
           transporter, permease [Bacillus cereus AH187]
          Length = 163

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P DI       +    L  + S +  R  +   I      +  T+   S R    L 
Sbjct: 59  LPTPLDIFLAFQELIKTGELFGHVSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           P + +++++P L      V++F       +
Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSHI 148



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436
             +     I++FR      I   + I +G  +GF       + P  Q+L   P     PL
Sbjct: 76  GELFGHVSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135

Query: 437 VVSCVSYYHLN 447
            V    +   +
Sbjct: 136 FVLWFGFGETS 146


>gi|55821312|ref|YP_139754.1| choline/proline/glycine betaine ABC uptake transporter
           membrane-spanning protein [Streptococcus thermophilus
           LMG 18311]
 gi|55823224|ref|YP_141665.1| proline/glycine betaine ABC transporter [Streptococcus thermophilus
           CNRZ1066]
 gi|55737297|gb|AAV60939.1| choline/proline/glycine betaine ABC uptake transporter
           membrane-spanning protein [Streptococcus thermophilus
           LMG 18311]
 gi|55739209|gb|AAV62850.1| proline/glycine betaine ABC transporter [Streptococcus thermophilus
           CNRZ1066]
          Length = 229

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+V +++            +    + + +  +M +IP           F  L P   +
Sbjct: 45  FIAIVTAIVLAIFVTIFLNFYKEFSHITIYLFSLMYAIPSFAL-------FALLIPITGL 97

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   A I  +  +Q + +  +    L  + + + E +++  ++ WQ    +  P +    
Sbjct: 98  GQTTAIIVLVIYAQ-YILVRTFLSGLSQVDKHVIEAAKAMGMTKWQILLKVQFPLAQKSF 156

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +          A   I     +I   G+G  +   ++  +L  +L+ ++  +G+ 
Sbjct: 157 FAGLRL-------ASTAIIAIATIGAMINAGGLGVILFDGLRTMNLTKLLWGIILTVGLS 209

Query: 253 FLYDQLL 259
            L + ++
Sbjct: 210 LLTNLII 216



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + I+ A ++ I V I++ F    S        L+ A P+   F L++            
Sbjct: 45  FIAIVTAIVLAIFVTIFLNFYKEFSHITIYLFSLMYAIPSFALFALLIPITGLGQTT--- 101

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++   Q+ ++   ++G S       E A +  +T W+    +  P     +  G 
Sbjct: 102 -AIIVLVIYAQYILVRTFLSGLSQVDKHVIEAAKAMGMTKWQILLKVQFPLAQKSFFAGL 160

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                    AS      +     +   GLG  + +     +  +++ G+++     L  N
Sbjct: 161 RL-------ASTAIIAIATIGAMINAGGLGVILFDGLRTMNLTKLLWGIILTVGLSLLTN 213

Query: 571 RFLW 574
             ++
Sbjct: 214 LIIY 217


>gi|256112711|ref|ZP_05453632.1| ABC transporter membrane protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|256264748|ref|ZP_05467280.1| ABC transporter permease [Brucella melitensis bv. 2 str. 63/9]
 gi|265994152|ref|ZP_06106709.1| ABC transporter permease [Brucella melitensis bv. 3 str. Ether]
 gi|262765133|gb|EEZ11054.1| ABC transporter permease [Brucella melitensis bv. 3 str. Ether]
 gi|263095158|gb|EEZ18827.1| ABC transporter permease [Brucella melitensis bv. 2 str. 63/9]
 gi|326408232|gb|ADZ65297.1| binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326537948|gb|ADZ86163.1| ABC transporter integral membrane protein [Brucella melitensis
           M5-90]
          Length = 211

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 60/180 (33%), Gaps = 9/180 (5%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72
           +R       + A + +   +  +   +    +P  +  +  +  +   + + A+ T   +
Sbjct: 12  KRAADGFLSVAAALAIWQAVVSIGQ-MPRFILPGPLDVVHALVANARLIAENAAATIGEV 70

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +V+        A     S     +++P++   Q+IPI        ++       K+ 
Sbjct: 71  LGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALAPILTLWLGYGPASKIA 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A L   F + ++         +  +      L + +           + + +P + P L
Sbjct: 131 VAVLMIFFPVVST--------FFDGMRCTETGLIDAAEILGAGRMAILFRIRIPSAFPAL 182



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 48  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 107

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         + A    
Sbjct: 108 IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRCTETGLIDAAEILG 163

Query: 488 ITGWRWWRYIILPGIFPYYVT 508
                    I +P  FP   +
Sbjct: 164 AGRMAILFRIRIPSAFPALAS 184


>gi|158335005|ref|YP_001516177.1| ABC transporter [Acaryochloris marina MBIC11017]
 gi|158305246|gb|ABW26863.1| ABC transporter [Acaryochloris marina MBIC11017]
          Length = 216

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 20/197 (10%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGFLT 117
           +   +  L +   +  +LL                S  L +VL+ + + ++ IP L  L 
Sbjct: 19  EAIQQHLLLVSVPLGFALLIGGYGGWQCVCWSRQHSTTLPLVLLNVFNGLRVIPSLAILF 78

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +      +        L AI          +  +       +P  + EV  +  ++ W
Sbjct: 79  LLIPILGLTFQAAAFALCLLAIP--------PILLATEVGFRTVPASVREVGMAMGMTPW 130

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F  + +P ++P ++  +          V+AS  +      I   G+GS+I L     +
Sbjct: 131 QLFCQVDLPLALPVILSGVKT----ATLEVIASATLAA---FIGAGGLGSFITLGFALNE 183

Query: 238 LLAILYAMLTMLGVIFL 254
              +L   + + G+  L
Sbjct: 184 PAILLVGAIPVAGLALL 200



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               L   P+     L++  +          L LL I      IL     G    P   +
Sbjct: 64  VFNGLRVIPSLAILFLLIPILGLTFQAAAFALCLLAIP----PILLATEVGFRTVPASVR 119

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           EV  +  +T W+ +  + LP   P  ++G  TA      ++ ++     G       GLG
Sbjct: 120 EVGMAMGMTPWQLFCQVDLPLALPVILSGVKTATLEVIASATLAAFIGAG-------GLG 172

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           ++I           +++G + +    L    F
Sbjct: 173 SFITLGFALNEPAILLVGAIPVAGLALLAEGF 204


>gi|148272712|ref|YP_001222273.1| putative proline/glycine/betaine/choline ABC transporter permease
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147830642|emb|CAN01578.1| putative proline/glycine/betaine/choline ABC transporter, permease
           component [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 241

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 53/155 (34%), Gaps = 4/155 (2%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           +  ++   I +   +             +    + I +A+++ +P G++IG      +  
Sbjct: 3   LFAEAFALIFDASRWSGSTGTGVRLVEHLSYTFLAIFLAALVAVPAGLYIGHTGRGRTIA 62

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              +    A P      +           P +  ++L I      +L  V AG  A    
Sbjct: 63  VSLSGGFRALPTLGVLVIFGLVFGIGLTGPMITFAILGIP----PLLAGVYAGLQAVDRA 118

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
             + A +  +T W+    + +P   P  ++G   A
Sbjct: 119 TVDAARAVGMTEWQILGKVEIPLALPLIISGFRAA 153



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
              A+ ++ L           + R   + V +    +++P LG L    + F     G +
Sbjct: 34  TFLAIFLAALVAVPAGLYIGHTGRGRTIAVSLSGGFRALPTLGVLVIFGLVFGIGLTGPM 93

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           I              +  +   +Y  L  + R   + +R+  ++ WQ    + +P ++P 
Sbjct: 94  I--------TFAILGIPPLLAGVYAGLQAVDRATVDAARAVGMTEWQILGKVEIPLALPL 145

Query: 192 LVWNMM 197
           ++    
Sbjct: 146 IISGFR 151


>gi|294679017|ref|YP_003579632.1| phosphate ABC transporter permease PstA [Rhodobacter capsulatus SB
           1003]
 gi|294477837|gb|ADE87225.1| phosphate ABC transporter, permease protein PstA [Rhodobacter
           capsulatus SB 1003]
          Length = 443

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILD 105
            D   +  +   L      +   M+  + ++L      +      A   R   ++   + 
Sbjct: 205 PDASELRPESAGLGVAILGSIYMMVLVLCLALPIGVAASIYLEEFAPKNRFTDLIEVNVA 264

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            + ++P + +    +  F+N + G    + L     +    +  +      +L  +P  +
Sbjct: 265 NLAAVPSIVYGILGLAAFIN-FAGMPQSSPLVGALVLTLMTLPRIIIPTRAALNAVPPSI 323

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            E +     S  Q  ++  +P ++PG++   ++ ++  
Sbjct: 324 REAALGVGASKTQTIFHHVLPLAVPGILTGAIIGLAQA 361



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +   + ++++   + +P+G+               +  I+     LAA P+ V+  L
Sbjct: 218 GVAILGSIYMMVLVLCLALPIGVAASIYLEEFAPKNRFTDLIEVNVANLAAVPSIVYGIL 277

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L  +L++   T   I+    A  +A P   +E A     +  + 
Sbjct: 278 GLAAFINFAGMPQSSPLVGALVLTLMTLPRIIIPTRAALNAVPPSIREAALGVGASKTQT 337

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TGAI     A
Sbjct: 338 IFHHVLPLAVPGILTGAIIGLAQA 361


>gi|261820178|ref|YP_003258284.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261604191|gb|ACX86677.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 222

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 17/213 (7%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--------AKSRRLGMVLVPILDI 106
            L+V  L      T      A V +L+   +              ++R + +++  +++I
Sbjct: 8   HLNVEQLLDATWETLYMTSVAGVATLIAGIILGVTLFLTSKGQLLQNRPVYLLISALVNI 67

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP    L   ++ F     G ++GA  AA+ A+           +   L  + + + 
Sbjct: 68  FRSIP-FIILIVLLIPFTKTLVGTILGAN-AALPALIVGAAPFYARLVEIGLREVDKGVI 125

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +RS         + + +P S P L   + ++       ++A         VI   G+G
Sbjct: 126 EAARSMGAKTHTLIFRVLLPESSPALASGITVT-------LIALVSYTAMAGVIGAGGLG 178

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   L   +++   +      M+ VI    Q +
Sbjct: 179 NLAYLEGFQRNHGDVTLVATLMILVIVFVIQFI 211



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 19/214 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFA 422
           F + +V  ++     T++   V  +   I  I +G+ +             +   I    
Sbjct: 6   FPHLNVEQLLDATWETLYMTSVAGVATLIAGIILGVTLFLTSKGQLLQNRPVYLLISALV 65

Query: 423 QLLAAFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            +  + P  +   L++     +    L  N  L  L++    +Y    V  G        
Sbjct: 66  NIFRSIPFIILIVLLIPFTKTLVGTILGANAALPALIVGAAPFYARL-VEIGLREVDKGV 124

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A S           ++LP   P   +G         + + ++ V   G       GL
Sbjct: 125 IEAARSMGAKTHTLIFRVLLPESSPALASGITVTLIALVSYTAMAGVIGAG-------GL 177

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G        + +  +V L   +M   ++ + +F+
Sbjct: 178 GNLAYLEGFQRNHGDVTLVATLMILVIVFVIQFI 211


>gi|229157882|ref|ZP_04285957.1| ABC transporter permease protein [Bacillus cereus ATCC 4342]
 gi|228625839|gb|EEK82591.1| ABC transporter permease protein [Bacillus cereus ATCC 4342]
          Length = 286

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 71/186 (38%), Gaps = 7/186 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F +VI +I +     +  +           + +       A+ +   +  ++VI + F
Sbjct: 29  IWFSIVILLILLFQIFEKGISYLSLEFFTSFASRNPKEAGIAAALSGTILFMSIVIPVSF 88

Query: 83  TFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F   T       AK      V+      +  +P + F    +  F+      +  + +A
Sbjct: 89  IFGVGTALYLEQYAKGSIFKKVIEINNQTLAGVPSVVFGLLGLTIFVYAL--HLGESIIA 146

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  +  +  +++ ++P  L E S     + WQ  + + +P++ PG++    
Sbjct: 147 AALTMSLLVLPTVVVASQEAIRSVPSSLLEASYGLGATKWQTMYRIVLPYAFPGIITGCT 206

Query: 198 MSMSGG 203
           +++S  
Sbjct: 207 LAISRA 212



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P+   
Sbjct: 116 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPSSLL 175

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 176 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 212


>gi|149911075|ref|ZP_01899702.1| putative ABC-type metal ion transport system,permease component
           [Moritella sp. PE36]
 gi|149805825|gb|EDM65814.1| putative ABC-type metal ion transport system,permease component
           [Moritella sp. PE36]
          Length = 218

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T   +  A  I+ L       L           +++L   L  I++I +S+P    L
Sbjct: 14  TLETLAMVGIAAAIACLLGMPTGILLHVTKTNGILANKKLNNALSVIVNIGRSVP-FIIL 72

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  L  G  IG   A I  +  + +  +   +  +L ++P  L E +++   + 
Sbjct: 73  LVAIIPFTRLIVGSSIGTG-AMIVPLTVASIPFIARLIEGALLDVPAGLIEAAQTMGATP 131

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
            Q    + +P +MPG++ ++ +++
Sbjct: 132 LQIIMKVLIPEAMPGIINSITITL 155



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 12/150 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V +   IA ++ +P GI         I     +++ +     +  + P  +   + 
Sbjct: 17  TLAMVGIAAAIACLLGMPTGILLHVTKTNGILANKKLNNALSVIVNIGRSVPFIILL-VA 75

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++    +++  T   I F            P    E A +   T  +  
Sbjct: 76  IIPFTRLIVGSSIGTGAMIVPLTVASIPFIARLIEGALLDVPAGLIEAAQTMGATPLQII 135

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
             +++P   P  +           N S ++
Sbjct: 136 MKVLIPEAMPGIINSITITLVTLVNYSAMA 165


>gi|125974112|ref|YP_001038022.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           thermocellum ATCC 27405]
 gi|125714337|gb|ABN52829.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Clostridium thermocellum ATCC 27405]
          Length = 291

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    ++ I  +L             +       + ++L        +  +   +ISLL
Sbjct: 28  LVIVSTILTIGLLLFLIGYIMIKGIPHIKPELFQWEYNTLNVSLMPALINTVIITIISLL 87

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                   +A        K  +L  ++    + +  IP + +  F +++F+      +  
Sbjct: 88  IAAPIGVFSAIYLVEYAKKGNKLVSIIRITAETLSGIPSIVYGLFGLLFFVTALGWGM-- 145

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + LA  F +    +  +  +  ++L  +P    E S        +  + + +P +MPG++
Sbjct: 146 SLLAGAFTLSIMILPLIMRTTEEALKAVPNSYREGSYGLGAGKLRTVFKIVLPSAMPGIL 205

Query: 194 WNMMMSMS 201
             +++ + 
Sbjct: 206 AGVILGIG 213



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I    ++  +   I  + I +I       +   +       +   V++ II+ +I  P+G
Sbjct: 34  ILTIGLLLFLIGYIMIKGIPHIKPELFQWEYNTLNVSLMPALINTVIITIISLLIAAPIG 93

Query: 406 IWIGFR--------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
           ++              + S I+  A+ L+  P+ V+  F L+    +       L  +  
Sbjct: 94  VFSAIYLVEYAKKGNKLVSIIRITAETLSGIPSIVYGLFGLLFFVTALGWGMSLLAGAFT 153

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +       I+        A PN ++E +        R    I+LP   P  + G I   G
Sbjct: 154 LSIMILPLIMRTTEEALKAVPNSYREGSYGLGAGKLRTVFKIVLPSAMPGILAGVILGIG 213


>gi|110803939|ref|YP_697933.1| phosphate ABC transporter permease [Clostridium perfringens SM101]
 gi|110684440|gb|ABG87810.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens SM101]
          Length = 274

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              IF +   V+++G I I   G    T     +           +      T   +L +
Sbjct: 15  LSAIFTIGILVIILGFIFIKGIGKINLT----FLTSNYSAGSGSGILPMIVTTLWTVLLS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + ++     + A      AK  ++   +    + +  IP + +  F  ++F+     K+ 
Sbjct: 71  LAVATPIGVLGAVYLQEYAKQGKMVNFIRFATESLAGIPSIVYGLFGGIFFVVDL--KMG 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LA    +    +  +  +  ++L  +P    E S     + +Q  + + +P +MPG+
Sbjct: 129 YSILAGSLTVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----YIALAI----KEQDLLAILYA 244
           +  +++S+        A+ ++  G       GI S        A     ++ D+      
Sbjct: 189 LSGVILSIGRI-IGESAAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAV 247

Query: 245 MLTMLGVIFLYD 256
            + ++ +I   +
Sbjct: 248 GIVLIVIILALN 259



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 89/244 (36%), Gaps = 14/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + + I    +      GI   ++ ++ ++++      ++ +   T++ V++ + +A+ 
Sbjct: 17  AIFTIGILVIILGFIFIKGIGKINLTFLTSNYSAGSGSGILPMIVTTLWTVLLSLAVATP 76

Query: 400 IWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLV-VSCVSYYHLNPNLWLSLL 455
           I +   +++         +       + LA  P+ V+     +  V    +  ++    L
Sbjct: 77  IGVLGAVYLQEYAKQGKMVNFIRFATESLAGIPSIVYGLFGGIFFVVDLKMGYSILAGSL 136

Query: 456 MIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +      ++           P  ++E +     T ++    +ILP   P  ++G I + 
Sbjct: 137 TVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGILSGVILSI 196

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGSFPEVVLGVLIMCCFV 566
           G     S  + + + G +     G+ +     T        EKG         +++   +
Sbjct: 197 GRIIGES-AAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAVGIVLIVII 255

Query: 567 LALN 570
           LALN
Sbjct: 256 LALN 259


>gi|226952526|ref|ZP_03822990.1| high-affinity phosphate ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294649821|ref|ZP_06727223.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Acinetobacter haemolyticus ATCC 19194]
 gi|226836753|gb|EEH69136.1| high-affinity phosphate ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292824304|gb|EFF83105.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 465

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 54/148 (36%), Gaps = 4/148 (2%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGF 115
             L      +   ML  ++IS+      A      A    +  ++   ++ + ++P + F
Sbjct: 240 SGLAGAFMGSLFMMLIVILISIPIGVASAVYLEEFAPKNVMTDIIEVNINNLAAVPSIVF 299

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                  F+       I A L     +    +  +  +   SL  +P  + + +     S
Sbjct: 300 GLLGAAIFIGWM-HLPISAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGAS 358

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             Q  ++  +P ++PG++   ++ ++  
Sbjct: 359 RVQTVFHHVLPLALPGILTGAIIGVAQA 386



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 31/213 (14%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL-VVSCVS 442
           + +++I  +I IP+G+              ++  I+     LAA P+ VF  L     + 
Sbjct: 250 LFMMLIVILISIPIGVASAVYLEEFAPKNVMTDIIEVNINNLAAVPSIVFGLLGAAIFIG 309

Query: 443 YYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + HL  +  L   L++   T   ++    A   A P   ++ A     +  +   + +LP
Sbjct: 310 WMHLPISAPLVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASRVQTVFHHVLP 369

Query: 501 GIFPYYVTGAITACG--------------GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
              P  +TGAI                   A+ AS+ +                 ++ + 
Sbjct: 370 LALPGILTGAIIGVAQALGETAPLLLIGMSAFVASVPASPLDQSTALPVQI----FLWQG 425

Query: 547 TEKGSF--PEVVLGVLIMCCFVLALNRF-LWHP 576
            E  +F        ++++   ++ LN   +W  
Sbjct: 426 NELRNFFEGRTAAAIIVLLALMIGLNSLAIWLR 458


>gi|308186865|ref|YP_003930996.1| ABC transport system, permease component [Pantoea vagans C9-1]
 gi|308057375|gb|ADO09547.1| putative ABC transport system, permease component [Pantoea vagans
           C9-1]
          Length = 741

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 85/484 (17%), Positives = 155/484 (32%), Gaps = 59/484 (12%)

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSF 172
           G +T ++     + PG+ +   L  I+         + F +   +   +   LEE S++ 
Sbjct: 283 GVVTASLATLFGIEPGRWL-YGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTL 341

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           R S W+ F  + +P   PGL    ++S          + M++ G   +    I   +  A
Sbjct: 342 RASRWRTFSRISLPLMAPGLANAFLISFIES-MADFGNPMVLGGSHGVLSTEIFFSVVGA 400

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
             +        A+L M+ + F     L + + +    F      G            R  
Sbjct: 401 QNDPSR----AAVLAMILLGFTLTAFLVQRVWLSGKSFATVTGKGDGG---------RHV 447

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
              R + YS +    P            G+I          L +N  + + +  F   V 
Sbjct: 448 MLPRPVRYSVYGMVIPWG---LFTLVIYGMIMIGGFVQSWGLNNNLTLDHYIRAFSISVN 504

Query: 353 CG--VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410
            G  V  G+AW S                      T+   ++   + +I+ +     I  
Sbjct: 505 QGQLVWSGVAWNSFW-------------------TTLEIALIAAPLTAIVGLLTAWLIVR 545

Query: 411 RPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           +     +   F  +L+ A P  V   + VS V  Y+L P       MI    + +  N+ 
Sbjct: 546 QKFAGRQTFEFMLMLSFAIPGTV---IGVSYVMAYNLPPLEITGTAMILIACF-VFRNMP 601

Query: 470 AGAS-------AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            G                E + +      R  R ++LP + P      + A   A  +  
Sbjct: 602 VGVRGGIAAMSQLDKSLDEASLTLGANSLRTLRKVVLPLLKPAISAALVYAFVRAITSIS 661

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
                     ++ T+    YI    E G +   +    ++   +L +         L G 
Sbjct: 662 AVIFLVSAQYNMATS----YIVGLVENGEYGVAIAYSSVLIVVMLLIIGLF---QLLVGE 714

Query: 583 RCLR 586
           R LR
Sbjct: 715 RRLR 718


>gi|159185246|ref|NP_355453.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
 gi|159140507|gb|AAK88238.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
          Length = 278

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++L+         A+ +     +  ++ I +  P L FL    + F
Sbjct: 74  YFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAV--VIMIARMTPGLSFLIPLFLLF 131

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L    ++G     I       V  + + M       P++LEE +     S WQ F  +
Sbjct: 132 QWL---NLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLV 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V + ++++   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 189 ALPIAKPGIVVSFILAVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 246

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + L      + ++ 
Sbjct: 247 AALIVTLPVLLLTMFAQKQIVA 268



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 5/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       I+A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 78  SVLVTGAATILALVIGVPAGYGIARLKAEKSAV--VIMIARMTPGLSFLIPLFLLFQWLN 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   LW  +++       I+  ++ G     P + +E AS    + W+ +R + LP   P
Sbjct: 136 LLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLVALPIAKP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I A   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 196 GIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 253

Query: 565 FVLALNRF 572
            VL L  F
Sbjct: 254 PVLLLTMF 261


>gi|326204678|ref|ZP_08194534.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           papyrosolvens DSM 2782]
 gi|325985245|gb|EGD46085.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           papyrosolvens DSM 2782]
          Length = 284

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 19/196 (9%)

Query: 76  MVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +V+++LF        A       K+ R    +   +  +   P + +    +  F+    
Sbjct: 73  IVLTILFAVPIGLGTAVYLEEYAKNNRFTKFIKINISNLSGTPSIVYGLLGLTVFVKTL- 131

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +  + LA    +    +  +  S  +++  +P+ L   S +   + WQ    + +P +
Sbjct: 132 -GLGKSILAGALTMSLVVLPIVIVSSQEAIKAVPQYLRHGSYALGATKWQTIRKIVIPAA 190

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGS---------YIALAIKEQDL 238
           +PG+   +++S+S          M+     V  LP G+ S         Y  + + ++  
Sbjct: 191 LPGIFTGVILSVSRALGETAPLIMVGAATYVSKLPEGLNSIFTALPMQIYYWMGLPKEQF 250

Query: 239 LAILYAMLTMLGVIFL 254
             +  A + +L  I L
Sbjct: 251 KDLAAAGIIVLLGILL 266



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 9/147 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCV 441
           V +I++  +  +P+G+               +  I+     L+  P+ V+    L V   
Sbjct: 70  VYIIVLTILFAVPIGLGTAVYLEEYAKNNRFTKFIKINISNLSGTPSIVYGLLGLTVFVK 129

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +       L  +L M       ++ +      A P   +  + +   T W+  R I++P 
Sbjct: 130 TLGLGKSILAGALTMSLVVLPIVIVSSQEAIKAVPQYLRHGSYALGATKWQTIRKIVIPA 189

Query: 502 IFPYYVTGAITACGGAWNASIVSEVAS 528
             P   TG I +   A   +    +  
Sbjct: 190 ALPGIFTGVILSVSRALGETAPLIMVG 216


>gi|170017608|ref|YP_001728527.1| phosphate ABC transporter permease [Leuconostoc citreum KM20]
 gi|169804465|gb|ACA83083.1| Phosphate ABC transporter, permease protein PtsA [Leuconostoc
           citreum KM20]
          Length = 294

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++I ++  +L           +            +      +   ++ AM+IS   
Sbjct: 20  IVALILIAMLAFILVRGVPHLSWHFLTSPAKAFEAGGGIGIQLFNSFYLLILAMIISFPI 79

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      A+  +   ++   ++I+ S+P +    F  + F+  +         A  
Sbjct: 80  ALGAAIYLNEYARKGKFTTIVRTAIEILSSLPSVVVGLFGFLLFVVKFHFGFSILSGAVA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +F   +  +T S+  SL  IP    E   +  LS W+   ++ +P ++P +V  +++S
Sbjct: 140 LTLFNLPL--LTRSIETSLAQIPNLQREAGSALGLSRWETVIHVILPAAVPSIVTGVVLS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      +V  + I +    +   V H ++                 I +F    
Sbjct: 8   KIATGVIYAISGIVALILIAMLAFILVRGVPHLSWHFLTSPAKAFEAGGGIGIQLFNSFY 67

Query: 393 LIIIASIIWIP--VGIWIGFRPHISS-----KIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           L+I+A II  P  +G  I    +         ++   ++L++ P+     +VV    +  
Sbjct: 68  LLILAMIISFPIALGAAIYLNEYARKGKFTTIVRTAIEILSSLPS-----VVVGLFGFLL 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYII 498
                     ++ G     LFN+     +            +E  S+  ++ W    ++I
Sbjct: 123 FVVKFHFGFSILSGAVALTLFNLPLLTRSIETSLAQIPNLQREAGSALGLSRWETVIHVI 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
           LP   P  VTG + + G  + 
Sbjct: 183 LPAAVPSIVTGVVLSAGRVFG 203


>gi|325293859|ref|YP_004279723.1| sugar ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325061712|gb|ADY65403.1| sugar ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 278

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L   +A +++L+         A+ +     +  ++ I +  P L FL    + F
Sbjct: 74  YFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAV--VIMIARMTPGLSFLIPLFLLF 131

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L    ++G     I       V  + + M       P++LEE +     S WQ F  +
Sbjct: 132 QWL---NLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLV 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PG+V + ++++   W   V    IV+         +  Y  L+ ++     +  
Sbjct: 189 ALPIAKPGIVVSFILAVIFSWNNFVF--GIVLASRETRTLPVAVYNMLSFEQVSWGPLAA 246

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + L      + ++ 
Sbjct: 247 AALIVTLPVLLLTMFAQKQIVA 268



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 5/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       I+A +I +P G  I       S +     +    P   F   +     + +
Sbjct: 78  SVLVTGAATILALVIGVPAGYGIARLKAEKSAV--VIMIARMTPGLSFLIPLFLLFQWLN 135

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   LW  +++       I+  ++ G     P + +E AS    + W+ +R + LP   P
Sbjct: 136 LLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLVALPIAKP 195

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
             V   I A   +WN  +   V +          +  Y   S E+ S+  +    LI+  
Sbjct: 196 GIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAV--YNMLSFEQVSWGPLAAAALIVTL 253

Query: 565 FVLALNRF 572
            VL L  F
Sbjct: 254 PVLLLTMF 261


>gi|324328176|gb|ADY23436.1| phosphate ABC transporter, permease protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 288

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 81/206 (39%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGVSYLSLDFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI L F F   T       AK      V+      +  +P + F  
Sbjct: 71  IVAALSGTILFMSIVIPLSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++PR L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYQVVLPYAFPGIITGCTLAISRA 214



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P    
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPRSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    ++LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYQVVLPYAFPGIITGCTLAISRA 214


>gi|254512716|ref|ZP_05124782.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium KLH11]
 gi|221532715|gb|EEE35710.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium KLH11]
          Length = 293

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 85/195 (43%), Gaps = 6/195 (3%)

Query: 72  MLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
           +   +VISL F  +     A+S  R    +L+  L + +++P +  ++  +++F   +  
Sbjct: 93  VFFTVVISLTFGTLGGYALARSGFRYAFWILMAAL-VFRAMPHITLVSGYLLWF---FEW 148

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            V G     I  +         + ++    NIP+D++E +     + +Q F ++ VP   
Sbjct: 149 NVWGILPTTIIVLVAINQPFTLWMLHSFFKNIPKDMDESAMVDGCTRFQAFRHVIVPVMW 208

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++   + S    +     + M++  +    +P I S++     E  ++  + A+++  
Sbjct: 209 PGVITTGLFSFLLAYNDFTVAVMLLSEENETIIPAINSFMGTTQVEGKVMYAVAAVVSAT 268

Query: 250 GVIFLYDQLLFRPMI 264
             +F+      R ++
Sbjct: 269 APLFILILFFQRQIV 283



 Score = 36.8 bits (84), Expect = 9.5,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 61/167 (36%), Gaps = 2/167 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ-LLAAFPANVFFPLVVSCVSYY 444
           T   V   ++I+       G  +       +     A  +  A P        +     +
Sbjct: 89  TGIVVFFTVVISLTFGTLGGYALARSGFRYAFWILMAALVFRAMPHITLVSGYLLWFFEW 148

Query: 445 HL-NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           ++        ++++   Q + L+ + +     P D  E A     T ++ +R++I+P ++
Sbjct: 149 NVWGILPTTIIVLVAINQPFTLWMLHSFFKNIPKDMDESAMVDGCTRFQAFRHVIVPVMW 208

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           P  +T  + +   A+N   V+ +            + +++  +  +G
Sbjct: 209 PGVITTGLFSFLLAYNDFTVAVMLLSEENETIIPAINSFMGTTQVEG 255


>gi|37520016|ref|NP_923393.1| phosphate ABC transporter permease protein [Gloeobacter violaceus
           PCC 7421]
 gi|35211008|dbj|BAC88388.1| phosphate ABC transporter permease protein [Gloeobacter violaceus
           PCC 7421]
          Length = 295

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 67/186 (36%), Gaps = 7/186 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
                L   +I +L+ G    +         P              T L +  A +IS+ 
Sbjct: 40  FAIIPLFSVLIYVLIQGFSSLSPDIFTELPAPAGTPGGGFGNAIQGTLLMVGIAALISVP 99

Query: 82  FTFVYATLAAKSRRLGMVLVPIL----DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           F  +     ++  R    ++ ++    +++  +P +      V  +  +       +  A
Sbjct: 100 FGVLSGIFLSEYARDDRGIIEVVRFGVNVLAGVPSIV---IGVFAYGVVVLSTKTFSAYA 156

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
             FA+    +  +  +  ++L  +P +L   S       +     + VP ++PG++  +M
Sbjct: 157 GGFALAILMLPIIVRTTEEALKLVPWELRLGSLGLGADRFNTIARVIVPAALPGIITGVM 216

Query: 198 MSMSGG 203
           +++S  
Sbjct: 217 LAVSRA 222



 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 59/202 (29%), Gaps = 12/202 (5%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT---YQDVLYVIWLGC 384
           P   L   S   +S +   F    +  V I +  Q    +                    
Sbjct: 21  PGRALFTTSMTTLSVVFTFFAIIPLFSVLIYVLIQGFSSLSPDIFTELPAPAGTPGGGFG 80

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPL 436
             +   ++++ IA++I +P G+  G            I   ++    +LA  P+ V    
Sbjct: 81  NAIQGTLLMVGIAALISVPFGVLSGIFLSEYARDDRGIIEVVRFGVNVLAGVPSIVIGVF 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWR 495
               V       + +     +      I+           P + +  +       +    
Sbjct: 141 AYGVVVLSTKTFSAYAGGFALAILMLPIIVRTTEEALKLVPWELRLGSLGLGADRFNTIA 200

Query: 496 YIILPGIFPYYVTGAITACGGA 517
            +I+P   P  +TG + A   A
Sbjct: 201 RVIVPAALPGIITGVMLAVSRA 222


>gi|320546802|ref|ZP_08041110.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448548|gb|EFW89283.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 295

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  +VIS+  +          AK  R    +   ++I+ S+P +    F  + F+
Sbjct: 65  SLFLLVITLVISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++   L N+     E   +  LS W+   ++ 
Sbjct: 125 VQFQYGFSILSGALALTVFN--LPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++P +V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 IPEALPSIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           +      ++  + + I    + Y+   F               I ++  + L++I  +I 
Sbjct: 17  IAGIIVAILASLLLYILVNGLPYVNWSFLTGKSSSYEAGGGIGIQLYNSLFLLVITLVIS 76

Query: 402 IPV----GIWIGFRPHISSKIQPF---AQLLAAFPANV--FFPLVVSCVSYYHLNPNLWL 452
           IP+    GI++                 ++L++ P+ V   F  ++  V + +    L  
Sbjct: 77  IPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGYLIFVVQFQYGFSILSG 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L +       +  NV  G     +  +E   +  ++ W    ++++P   P  VTG + 
Sbjct: 137 ALALTVFNLPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVHVVIPEALPSIVTGIVL 196

Query: 513 ACGGAWN 519
           A G  + 
Sbjct: 197 ASGRIFG 203


>gi|296111790|ref|YP_003622172.1| phosphate ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295833322|gb|ADG41203.1| phosphate ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 294

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 71/185 (38%), Gaps = 5/185 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
              +  +++I ++  +L           +            +      +   ++ AM+IS
Sbjct: 17  ISAIVALILIAMLAFILVRGVPHLSWHFLTSPAKAFEAGGGIGIQLFNSFYLLILAMLIS 76

Query: 80  LLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
                  A      AK  +   V+   ++I+ S+P +    F  + F+  +      + L
Sbjct: 77  FPIALGAAIYLNEYAKKSKFTTVVRTAIEILSSLPSVVVGLFGFLIFVVQF--HFGFSIL 134

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           +   A+    +  +T S+  SL  IP    E   +  LS W+   ++ +P ++P +V  +
Sbjct: 135 SGAIALTFFNLPLLTRSIETSLAQIPDLQREAGSALGLSRWETVIHVILPAAVPSIVTGV 194

Query: 197 MMSMS 201
           ++S  
Sbjct: 195 VLSAG 199



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 69/201 (34%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      +V  + I +    +   V H ++                 I +F    
Sbjct: 8   KIATGVIYAISAIVALILIAMLAFILVRGVPHLSWHFLTSPAKAFEAGGGIGIQLFNSFY 67

Query: 393 LIIIASIIWIP--VGIWIGFRPHISS-----KIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           L+I+A +I  P  +G  I    +         ++   ++L++ P+     +VV    +  
Sbjct: 68  LLILAMLISFPIALGAAIYLNEYAKKSKFTTVVRTAIEILSSLPS-----VVVGLFGFLI 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYII 498
                     ++ G      FN+     +            +E  S+  ++ W    ++I
Sbjct: 123 FVVQFHFGFSILSGAIALTFFNLPLLTRSIETSLAQIPDLQREAGSALGLSRWETVIHVI 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
           LP   P  VTG + + G  + 
Sbjct: 183 LPAAVPSIVTGVVLSAGRVFG 203


>gi|291537651|emb|CBL10763.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Roseburia intestinalis M50/1]
          Length = 297

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPI 112
           D  S+      T    + A+V+S+ F    A    +  + G  LV I+ +    +  IP 
Sbjct: 75  DNVSMLPAMINTLFMTVLALVLSVPFGVGAAIYLVEYAKKGNKLVGIIRVTAETLSGIPS 134

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + +  F +++F+            AA  AI    V  +  +  ++L  +P    E S   
Sbjct: 135 IIYGLFGMLFFVTALKCGYSMMAGAATLAIMVLPV--IMRTTEEALLCVPDSFREGSFGL 192

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  + + +P ++PG++  +++++ 
Sbjct: 193 GAGKLRTIFKIVLPSAIPGILSGIILAIG 221



 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 62/177 (35%), Gaps = 10/177 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFT----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             V+  +   I  + I Y+           D + ++     T+F  V+ ++++    +  
Sbjct: 45  VGVLVFLVGYILIRGIPYLKPSLFAWTYNSDNVSMLPAMINTLFMTVLALVLSVPFGVGA 104

Query: 405 GIWIGFRPHISSKIQPFA----QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIF 458
            I++       +K+        + L+  P+ ++  F ++    +       +  +  +  
Sbjct: 105 AIYLVEYAKKGNKLVGIIRVTAETLSGIPSIIYGLFGMLFFVTALKCGYSMMAGAATLAI 164

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                I+          P+ F+E +        R    I+LP   P  ++G I A G
Sbjct: 165 MVLPVIMRTTEEALLCVPDSFREGSFGLGAGKLRTIFKIVLPSAIPGILSGIILAIG 221


>gi|254388624|ref|ZP_05003857.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|294813235|ref|ZP_06771878.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|326441655|ref|ZP_08216389.1| putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197702344|gb|EDY48156.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
 gi|294325834|gb|EFG07477.1| ABC transporter permease [Streptomyces clavuligerus ATCC 27064]
          Length = 245

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
             A       + G + V + +  ++IP+       V+  + L P +  G     I A+  
Sbjct: 47  PLACWLGHIGKGGALAVNLSNAGRAIPVFA-----VLALLMLTPLRTAGYTPT-IIALVL 100

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V  +  + Y  +  + R + E +R   +S  Q F  + +P + P L+  +  +     
Sbjct: 101 FAVPPLLTNAYVGMREVDRAVVEAARGMGMSARQVFLRVELPLAYPLLMTGVRSAAVQVV 160

Query: 205 FFVVASEMIVVGD 217
                + M+  G 
Sbjct: 161 ATATIASMVGQGG 173



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 9/152 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+  W+G      +     +    A P      L +  ++           + ++     
Sbjct: 47  PLACWLGHIGKGGALAVNLSNAGRAIPVFAV--LALLMLTPLRTAGYTPTIIALVLFAVP 104

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +L N   G         E A    ++  + +  + LP  +P  +TG  +A       + 
Sbjct: 105 PLLTNAYVGMREVDRAVVEAARGMGMSARQVFLRVELPLAYPLLMTGVRSAAVQVVATAT 164

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           ++ +   G       GLG  I         P+
Sbjct: 165 IASMVGQG-------GLGRIITAGFTTFDTPQ 189


>gi|315231447|ref|YP_004071883.1| ABC-type dipeptide/oligopeptide transport system permease
           [Thermococcus barophilus MP]
 gi|315184475|gb|ADT84660.1| ABC-type dipeptide/oligopeptide transport system permease
           [Thermococcus barophilus MP]
          Length = 480

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF 434
              ++W   +++   V + +++ +I I  G+            +Q   + +A+ P     
Sbjct: 266 WAGLVWGTRVSLVVGVSVAVLSVLIGIAYGVTSAYLGGWKDEFMQRVNEFVASIPTL--- 322

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI--AGASAFPNDFKEVASSFHITGWR 492
           P+++   + +  +  LW  + ++    W  +  V            + E A +      R
Sbjct: 323 PILILLGAAFKGHVTLWTIVFLLVMFGWTGIAKVARSMALQIKEQTYVEAAKALGAGTGR 382

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG---LGAYIAESTEK 549
                I+P I PY       +  GA            G     T G     A    +T  
Sbjct: 383 IIFKHIMPQIMPYAFAVMALSVPGAVLTEASLSFLGLGDPTAVTWGQILYDAQTNSATIN 442

Query: 550 GSF-----PEVVLGVLIMC--CFVLALNRFLWHPLYLY 580
           G +     P + + ++ +      +AL+R L   L   
Sbjct: 443 GYWWWVIPPGLAISLVALTFVLIGVALDRVLNPRLRRL 480



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 24/217 (11%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFL 116
              L      + +  +S  V+S+L    Y   +A         +  + + + SIP L  L
Sbjct: 266 WAGLVWGTRVSLVVGVSVAVLSVLIGIAYGVTSAYLGGWKDEFMQRVNEFVASIPTLPIL 325

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD--LEEVSRSFRL 174
                 F            L  I  +     W     + +S+    ++    E +++   
Sbjct: 326 ILLGAAFKGH-------VTLWTIVFLLVMFGWTGIAKVARSMALQIKEQTYVEAAKALGA 378

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
              +  +   +P  MP     M +S+ G    +  + +  +G         G  +  A  
Sbjct: 379 GTGRIIFKHIMPQIMPYAFAVMALSVPGA--VLTEASLSFLGLGDPTAVTWGQILYDAQT 436

Query: 235 EQDLL------------AILYAMLTMLGVIFLYDQLL 259
               +            AI    LT + +    D++L
Sbjct: 437 NSATINGYWWWVIPPGLAISLVALTFVLIGVALDRVL 473


>gi|189500176|ref|YP_001959646.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           phaeobacteroides BS1]
 gi|189495617|gb|ACE04165.1| phosphate ABC transporter, inner membrane subunit PstA [Chlorobium
           phaeobacteroides BS1]
          Length = 436

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 4/171 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  +      +   ML  + +S       A      A        +   ++ + ++P +
Sbjct: 210 ELAGIWGAVKGSIYTMLVTLALSFPIGICAAVYLEEFAPKNLATDFIEVNINNLAAVPSI 269

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N + G      L     +    +  +  +   +L  +P  + E +    
Sbjct: 270 VFGLLGLAVFLNFF-GMPRSTPLVGGIVLMLMTLPTIIIASRAALKAVPPSIREAALGVG 328

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            S  Q      +P ++PG++   ++ M+          MI +   ++ +PG
Sbjct: 329 SSKLQVVASHVLPLALPGMLTGTIIGMAQALGETAPLLMIGMVAFIVDIPG 379



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 14/169 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHIS-----------SKIQPFAQLLAAFPANV 432
              ++  V   I   ++ + +   IG    +              I+     LAA P+ V
Sbjct: 211 LAGIWGAVKGSIYTMLVTLALSFPIGICAAVYLEEFAPKNLATDFIEVNINNLAAVPSIV 270

Query: 433 FFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           F  L ++    +   P    L   ++++  T   I+    A   A P   +E A     +
Sbjct: 271 FGLLGLAVFLNFFGMPRSTPLVGGIVLMLMTLPTIIIASRAALKAVPPSIREAALGVGSS 330

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             +     +LP   P  +TG I     A   +    +       +   G
Sbjct: 331 KLQVVASHVLPLALPGMLTGTIIGMAQALGETAPLLMIGMVAFIVDIPG 379


>gi|312865322|ref|ZP_07725550.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311099433|gb|EFQ57649.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 211

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 16/198 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++IS+L     A LA +  R+   +      ++ +P LG L   + +    +     
Sbjct: 28  LEALLISVLLGLALAYLAYQHPRMQKWITSFSQGLRVLPSLGVLFILIPFLGVGH----- 82

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  +  +    L  +P  L E +++  ++  Q    L +P ++P +
Sbjct: 83  ---FPALLALIFLGLAPVLINTVLGLNQVPASLVETAQAMGMTPRQLTVKLSLPLALPYI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  + +++      ++AS  +    T I   G+GS I   +       +L      + ++
Sbjct: 140 LTGVKLAL----VEIIASATLA---TYIGAGGLGSLIFTGLGLYRYD-LLVIGGASVALL 191

Query: 253 FLYDQLLFRPMIVWSNKF 270
            L   LL   +I WS ++
Sbjct: 192 SLISMLLLDFLIRWSRRY 209



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
            P +   I  F+Q L   P+     +++  +   H    L L  L +      +L N + 
Sbjct: 48  HPRMQKWITSFSQGLRVLPSLGVLFILIPFLGVGHFPALLALIFLGLA----PVLINTVL 103

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG-GAWNASIVSEVASW 529
           G +  P    E A +  +T  +    + LP   PY +TG   A      +A++ + + + 
Sbjct: 104 GLNQVPASLVETAQAMGMTPRQLTVKLSLPLALPYILTGVKLALVEIIASATLATYIGAG 163

Query: 530 GHIHLRTTGLGAY 542
           G   L  TGLG Y
Sbjct: 164 GLGSLIFTGLGLY 176


>gi|282853470|ref|ZP_06262807.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|282582923|gb|EFB88303.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|314922213|gb|EFS86044.1| ABC transporter, permease protein [Propionibacterium acnes
           HL001PA1]
 gi|314965295|gb|EFT09394.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA2]
 gi|314982451|gb|EFT26544.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA3]
 gi|315090558|gb|EFT62534.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA4]
 gi|315094055|gb|EFT66031.1| ABC transporter, permease protein [Propionibacterium acnes
           HL060PA1]
 gi|315104434|gb|EFT76410.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA2]
 gi|327329392|gb|EGE71152.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL103PA1]
          Length = 215

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 89/220 (40%), Gaps = 21/220 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   L  ++ +++SLL +      A ++R    +LVP   IL  + S+
Sbjct: 6   ISENWDQIWQLTSHHALLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASILYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVVLPLIL--------GTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWS 267
              +      I   ++  L +  ++D ++    R +  W 
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLGIIFDLVIVCVGRLLTPWQ 210



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F ++   +    L+P   +  L ++G   
Sbjct: 37  PLGWWAHRARTARRILVPGASILYALPSLPLFVVLPLILGTKILDPINVVVALTLYGIAL 96

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +         +     +  A +   +  + +  + LP   P  V G         +   
Sbjct: 97  LVRTAT-DAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLSLVS 155

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 156 VGALVG-------VPSLGYFFTDGYQRSFPTEIWVGIIGTLVLGIIFD 196


>gi|86138912|ref|ZP_01057484.1| phosphate ABC transporter, permease protein [Roseobacter sp.
           MED193]
 gi|85824559|gb|EAQ44762.1| phosphate ABC transporter, permease protein [Roseobacter sp.
           MED193]
          Length = 450

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 52/142 (36%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  + +SL      +      A    +  V+   +  + ++P + +    + 
Sbjct: 227 MMGSLFMMLVVLALSLPIGVAASIYLEEFAPKNWITDVIEVNIANLAAVPSIVYGILGLA 286

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N      + A L     +    +  +  S   +L  +P  + + +     S  Q  +
Sbjct: 287 VFINYM-HLPMSAPLVGGLVLTLMTLPTIIISTRAALKAVPPSIRDAALGVGASKMQSVF 345

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 346 HHVLPLAAPGILTGTIIGLAQA 367



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 26/214 (12%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              I+  I+     LAA P+ V+  
Sbjct: 223 MGVSMMGSLFMMLVVLALSLPIGVAASIYLEEFAPKNWITDVIEVNIANLAAVPSIVYGI 282

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +  ++  L   L++   T   I+ +  A   A P   ++ A     +  +
Sbjct: 283 LGLAVFINYMHLPMSAPLVGGLVLTLMTLPTIIISTRAALKAVPPSIRDAALGVGASKMQ 342

Query: 493 WWRYIILPGIFPYYVTGAIT----ACGGAWNASIVSEVASWGHIHLRTTGLG-------- 540
              + +LP   P  +TG I     A G      ++  V         T G G        
Sbjct: 343 SVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNAPETIGEGLLSPNSAM 402

Query: 541 -AYIAESTEKGS---FPEVVLGVLIMCCFVLALN 570
            A I E  ++     +     G++I+  F++ +N
Sbjct: 403 PAQIYEWAKRADPAFYERAWGGIIILLIFLVTMN 436


>gi|83855362|ref|ZP_00948892.1| polyamine ABC transporter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83941885|ref|ZP_00954347.1| polyamine ABC transporter, permease protein [Sulfitobacter sp.
           EE-36]
 gi|83843205|gb|EAP82372.1| polyamine ABC transporter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83847705|gb|EAP85580.1| polyamine ABC transporter, permease protein [Sulfitobacter sp.
           EE-36]
          Length = 555

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 17/186 (9%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL------------ 113
            RT    +   +  +L  +  A + A        L+ IL ++     L            
Sbjct: 335 LRTLFMSVCITLSCILLGYPVAWILANLPARTANLLMILVLLPFWTSLLVRTSAWKVMLQ 394

Query: 114 --GFLTFTVVYFMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
             G +  T+V+   +     +     +   I A+    +  M   +Y  +  +P      
Sbjct: 395 QQGVINDTLVWLGLVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMQTVPPSYLRA 454

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           ++S   + W  FW +  P S+PG+    ++       + +  E++           I  +
Sbjct: 455 AKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYH 514

Query: 229 IALAIK 234
           I+ ++ 
Sbjct: 515 ISSSLN 520



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 36/118 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 403 LVWLGLVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMQTVPPSYLRAAKSLGATN 462

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           W  +  +  P   P    G+I     +    I  E+         +  +  +I+ S  
Sbjct: 463 WTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISSSLN 520


>gi|311030802|ref|ZP_07708892.1| phosphate ABC transporter (permease) [Bacillus sp. m3-13]
          Length = 294

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+  V+++ +   ++         + I + +    D   +      T   ML    I+L 
Sbjct: 32  LIGLVVLVILFYRVISQSMGWIDLQFITNKLSTMADRAGIMGAIMGTLWLMLVVAPITLF 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK  RL   L   +  +  +P + F    +  F+       I   LA 
Sbjct: 92  LGVGTAIYLEEYAKKGRLQRFLQTNISNLAGVPSIVFGILGLTIFVRAAGLGNI--VLAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +++ ++P  L E S     + WQ    + +P S+PG++  +++
Sbjct: 150 GLTMALLVLPIVVVASQEAIRSVPGYLREASYGMGATKWQTIKNIVLPASLPGILTGVIL 209

Query: 199 SMSGG 203
           ++S  
Sbjct: 210 ALSRA 214



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 18/245 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
            L +        ++  + W  + +I N   T  D   ++     T++ ++V+  I   + 
Sbjct: 34  GLVVLVILFYRVISQSMGWIDLQFITNKLSTMADRAGIMGAIMGTLWLMLVVAPITLFLG 93

Query: 402 IPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLM 456
           +   I++     +  +   +Q     LA  P+ VF    L +   +    N  L   L M
Sbjct: 94  VGTAIYLEEYAKKGRLQRFLQTNISNLAGVPSIVFGILGLTIFVRAAGLGNIVLAGGLTM 153

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                  ++        + P   +E +     T W+  + I+LP   P  +TG I A   
Sbjct: 154 ALLVLPIVVVASQEAIRSVPGYLREASYGMGATKWQTIKNIVLPASLPGILTGVILALSR 213

Query: 517 AWN------------ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           A                I      +    +    +  +  ++     +  +    +++  
Sbjct: 214 AIGETAPLVVLGIPALLIPLPEGIFDKFTVLPMQIYYWTIDAALVAEYANLAAATIVVLL 273

Query: 565 FVLAL 569
           F+L +
Sbjct: 274 FILLV 278


>gi|260585031|ref|ZP_05852773.1| methionine ABC transporter permease [Granulicatella elegans ATCC
           700633]
 gi|260157227|gb|EEW92301.1| methionine ABC transporter permease [Granulicatella elegans ATCC
           700633]
          Length = 234

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 16/207 (7%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQ 108
           D + + +  + T      +     +                   ++ + + L  I++I +
Sbjct: 22  DWNEVIKATNETVYMSFLSTFYVFIIGLALGLFLYLTSPGRSLENKWVNLFLSGIINIFR 81

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           S+P +  L   ++ F     G ++G +  AI  +  S        +  SL  IP  + E 
Sbjct: 82  SVPFIILLAL-LMPFTKALMGTILGPK-GAIPTLVISAAPFYARLVSISLNEIPSGVVEA 139

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + S   +  Q    + +P S+P LV  + ++       +V S  +        L  +   
Sbjct: 140 AESMGATTRQIITKVLIPESLPALVSGITVTT----IALVGSTAVAGVIGAGGLGNLAYM 195

Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLY 255
           I     +QD+  I  A + +L ++FL 
Sbjct: 196 IGFTRNKQDI--IFVATVAILILVFLI 220



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 67/206 (32%), Gaps = 18/206 (8%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLA 426
           D   VI     T++   +      II + +G+++             ++  +     +  
Sbjct: 22  DWNEVIKATNETVYMSFLSTFYVFIIGLALGLFLYLTSPGRSLENKWVNLFLSGIINIFR 81

Query: 427 AFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           + P  +   L++     +    L P   +  L+I    +Y    V    +  P+   E A
Sbjct: 82  SVPFIILLALLMPFTKALMGTILGPKGAIPTLVISAAPFYARL-VSISLNEIPSGVVEAA 140

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S   T  +    +++P   P  V+G          ++ V+ V   G +      +G   
Sbjct: 141 ESMGATTRQIITKVLIPESLPALVSGITVTTIALVGSTAVAGVIGAGGLGNLAYMIGF-- 198

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569
                +     + +  + +   V  +
Sbjct: 199 ----TRNKQDIIFVATVAILILVFLI 220


>gi|259416460|ref|ZP_05740380.1| phosphate ABC transporter, permease protein PstA [Silicibacter sp.
           TrichCH4B]
 gi|259347899|gb|EEW59676.1| phosphate ABC transporter, permease protein PstA [Silicibacter sp.
           TrichCH4B]
          Length = 441

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 50/142 (35%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   M   + ++L      +      A    L  ++   +  + ++P + F    + 
Sbjct: 218 MLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWLTDIIEVNISNLAAVPSIVFGILGLA 277

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N        A L     +    +  +  S   SL  +P  + + +     S  Q  +
Sbjct: 278 VFINYM-HLPTSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQAVF 336

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 337 HHVLPLAAPGILTGTIIGLAQA 358



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++ +   + +P+G+              ++  I+     LAA P+ VF  
Sbjct: 214 MGVSMLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWLTDIIEVNISNLAAVPSIVFGI 273

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +   +  L   L++   T   I+ +  A   A P   ++ A     +  +
Sbjct: 274 LGLAVFINYMHLPTSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQ 333

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 334 AVFHHVLPLAAPGILTGTIIGLAQA 358


>gi|85708494|ref|ZP_01039560.1| phosphate ABC transporter, permease protein [Erythrobacter sp.
           NAP1]
 gi|85690028|gb|EAQ30031.1| phosphate ABC transporter, permease protein [Erythrobacter sp.
           NAP1]
          Length = 421

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  M+++ L  F    LAA        K+R   ++ V I + + ++P + F    +  F+
Sbjct: 207 ILTMIVTFLLAFPIGVLAALYLEEYAPKNRWTDLIEVSI-NNLAAVPSIIFGLLGLAVFL 265

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L+P       +  +  +    +  +  S   ++ ++P  + + + +   S  Q  ++  
Sbjct: 266 TLFPNLRSAPVIGGM-TLALMTMPVIVISGRNAIKSVPPSIRDGALAVGASPVQVVFHHV 324

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++ M+  
Sbjct: 325 LPLALPGMLTGTIIGMARA 343



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 14/139 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +I+  ++  P+G+               +  I+     LAA P+ +F   ++    +
Sbjct: 207 ILTMIVTFLLAFPIGVLAALYLEEYAPKNRWTDLIEVSINNLAAVPSIIFG--LLGLAVF 264

Query: 444 YHLNPNLWLSLLM-----IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             L PNL  + ++        T   I+ +      + P   ++ A +   +  +   + +
Sbjct: 265 LTLFPNLRSAPVIGGMTLALMTMPVIVISGRNAIKSVPPSIRDGALAVGASPVQVVFHHV 324

Query: 499 LPGIFPYYVTGAITACGGA 517
           LP   P  +TG I     A
Sbjct: 325 LPLALPGMLTGTIIGMARA 343


>gi|241894984|ref|ZP_04782280.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871702|gb|EER75453.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 297

 Score = 56.9 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 83/203 (40%), Gaps = 9/203 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLP 62
           +L P  S ++   I   +A ++++ +  ++ + + +                      + 
Sbjct: 1   MLNPKQSDKLASAILYAIAGLVILILAALVGYILVQGVPHLSWHFLTAPSSSFTAGGGIG 60

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
                +   ++  M+IS              A +  RL  ++   ++I+ S+P +    F
Sbjct: 61  VQLFNSFYLLIITMIISFPIALGAGIYLHEYANQKSRLIQLIRTAIEILSSLPSVVVGLF 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + F+  +  K+  + L+   A+    +  +T S+ +SL +IP    E   +  LS W+
Sbjct: 121 GFLLFVVQF--KLGFSILSGAIALTFFNLPLLTRSVEESLRSIPDLQREAGSALGLSRWE 178

Query: 179 KFWYLGVPFSMPGLVWNMMMSMS 201
              ++ +P ++P +V  +++S  
Sbjct: 179 TVGHIILPAAVPSIVTGVVLSAG 201



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 68/188 (36%), Gaps = 22/188 (11%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGI 406
             ++  +   I  Q + ++  HF           G I   +F    L+II  II  P+ +
Sbjct: 23  ILILAALVGYILVQGVPHLSWHFLTAPSSSFTAGGGIGVQLFNSFYLLIITMIISFPIAL 82

Query: 407 WIGFR--------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
             G            +   I+   ++L++ P+     +VV    +        L   ++ 
Sbjct: 83  GAGIYLHEYANQKSRLIQLIRTAIEILSSLPS-----VVVGLFGFLLFVVQFKLGFSILS 137

Query: 459 GTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           G      FN       V     + P+  +E  S+  ++ W    +IILP   P  VTG +
Sbjct: 138 GAIALTFFNLPLLTRSVEESLRSIPDLQREAGSALGLSRWETVGHIILPAAVPSIVTGVV 197

Query: 512 TACGGAWN 519
            + G  + 
Sbjct: 198 LSAGRVFG 205


>gi|240145151|ref|ZP_04743752.1| phosphate ABC transporter, permease protein PstA [Roseburia
           intestinalis L1-82]
 gi|257202829|gb|EEV01114.1| phosphate ABC transporter, permease protein PstA [Roseburia
           intestinalis L1-82]
          Length = 297

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPI 112
           D  S+      T    + A+++S+ F    A    +  + G  LV I+ +    +  IP 
Sbjct: 75  DNVSMLPAMINTLFMTVLALLLSVPFGVGAAIYLVEYAKKGNKLVGIIRVTAETLSGIPS 134

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + +  F +++F+            AA  AI    V  +  +  ++L  +P    E S   
Sbjct: 135 IIYGLFGMLFFVTALKWGYSMMAGAATLAIMVLPV--IMRTTEEALLCVPDSFREGSFGL 192

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  + + +P ++PG++  +++++ 
Sbjct: 193 GAGKLRTIFKIVLPSAIPGILSGIILAIG 221



 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFT----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             V+  +   I  + I Y+           D + ++     T+F  V+ ++++    +  
Sbjct: 45  VGVLVFLVGYILIRGIPYLKTSLFAWTYNSDNVSMLPAMINTLFMTVLALLLSVPFGVGA 104

Query: 405 GIWIGFRPHISSKIQPFA----QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I++       +K+        + L+  P+ ++    +  + ++        S++    T
Sbjct: 105 AIYLVEYAKKGNKLVGIIRVTAETLSGIPSIIY---GLFGMLFFVTALKWGYSMMAGAAT 161

Query: 461 QWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              ++  VI           P+ F+E +        R    I+LP   P  ++G I A G
Sbjct: 162 LAIMVLPVIMRTTEEALLCVPDSFREGSFGLGAGKLRTIFKIVLPSAIPGILSGIILAIG 221


>gi|218677836|ref|ZP_03525733.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli CIAT 894]
          Length = 174

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 55/135 (40%), Gaps = 9/135 (6%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           +++A P     P++V    +   +     + ++I  T + +L N +AG +A  +  +++ 
Sbjct: 1   MVSALPIIGVAPVMVMWFGFDWPSK----AAVVIIMTFFPMLVNTVAGLAASGSMERDLM 56

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            ++  + W+    + LP   P+           A   +IV+E      +     G+G  I
Sbjct: 57  RTYASSDWQTLLKLKLPAAMPFIFNALKINSTLALIGAIVAEFFGTPIV-----GMGFRI 111

Query: 544 AESTEKGSFPEVVLG 558
           +    + +   V  G
Sbjct: 112 STEIGRMNVDMVWAG 126



 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           ++PI+G     V++F   +P K           +     + M  +    L        ++
Sbjct: 4   ALPIIGVAPVMVMWFGFDWPSKAA--------VVIIMTFFPMLVNTVAGLAASGSMERDL 55

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            R++  S WQ    L +P +MP +   + ++ +      + +E         P+ G+G  
Sbjct: 56  MRTYASSDWQTLLKLKLPAAMPFIFNALKINSTLALIGAIVAEFFGT-----PIVGMGFR 110

Query: 229 IALAIKEQDLLAILYA 244
           I+  I   ++  +   
Sbjct: 111 ISTEIGRMNVDMVWAG 126


>gi|182434305|ref|YP_001822024.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326774818|ref|ZP_08234083.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178462821|dbj|BAG17341.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326655151|gb|EGE39997.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 224

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 6/142 (4%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              +           +  ++IS L     A +     + G + V + +I +++P      
Sbjct: 20  PDGIGNRLGEHLYLTVVCLLISCLVALPVALVLGHLGKGGALAVNLSNIGRAVPTFA--- 76

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
              V  + L        + + + A+    V  +  + Y  +  + RD+   +R   ++G 
Sbjct: 77  ---VLVLLLLTPLGTRGQWSTVIALVLFAVPPLLTNAYVGMREVDRDVVRAARGMGMTGR 133

Query: 178 QKFWYLGVPFSMPGLVWNMMMS 199
           Q    + +P ++P ++  + ++
Sbjct: 134 QLLLGVELPLALPLILTGVRIA 155



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 2/153 (1%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++  ++     +     +       ++  VV ++I+ ++ +PV + +G      +     
Sbjct: 6   ETWSWLTTAAHWSGPDGIGNRLGEHLYLTVVCLLISCLVALPVALVLGHLGKGGALAVNL 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           + +  A P       V+  ++           + ++      +L N   G      D   
Sbjct: 66  SNIGRAVPTFAVL--VLLLLTPLGTRGQWSTVIALVLFAVPPLLTNAYVGMREVDRDVVR 123

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            A    +TG +    + LP   P  +TG   A 
Sbjct: 124 AARGMGMTGRQLLLGVELPLALPLILTGVRIAA 156


>gi|257054149|ref|YP_003131981.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256584021|gb|ACU95154.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 258

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 9/164 (5%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMV 99
             + RD   I   +L+  +L        +      V+ +        +  +   R    V
Sbjct: 40  WALARDNDIIEAESLNASTLLSKTWEHLVITAVVTVLVIGVAVPLGVILTRPWARPAAPV 99

Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
            + I +I Q+ P LG L    ++         +    AA   I    +  +  +    + 
Sbjct: 100 FLGIANIGQAAPSLGVLVLFFLW-------TEMEGLWAAALPIAFYSLLPVLRNTITGID 152

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           ++   L +  R   +S     + + +P ++P ++  +  S+   
Sbjct: 153 SVDPALVDAGRGIGMSALGVLFRIELPLAVPMILAGLRTSLVLA 196



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 10/168 (5%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV-FFPLVVSCVSYYH 445
           +    V+ ++   + +P+G+        +    P    +A          ++V    +  
Sbjct: 67  LVITAVVTVLVIGVAVPLGVI--LTRPWARPAAPVFLGIANIGQAAPSLGVLVLFFLWTE 124

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +      +L + F +   +L N I G  +      +      ++       I LP   P 
Sbjct: 125 MEGLWAAALPIAFYSLLPVLRNTITGIDSVDPALVDAGRGIGMSALGVLFRIELPLAVPM 184

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            + G  T+   A   + ++   + G       GLG  I    +     
Sbjct: 185 ILAGLRTSLVLAVGTATLAFFVNGG-------GLGELIDAGYKLNRTS 225


>gi|171741031|ref|ZP_02916838.1| hypothetical protein BIFDEN_00097 [Bifidobacterium dentium ATCC
           27678]
 gi|171742132|ref|ZP_02917939.1| hypothetical protein BIFDEN_01238 [Bifidobacterium dentium ATCC
           27678]
 gi|283455580|ref|YP_003360144.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283456749|ref|YP_003361313.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|171276645|gb|EDT44306.1| hypothetical protein BIFDEN_00097 [Bifidobacterium dentium ATCC
           27678]
 gi|171277746|gb|EDT45407.1| hypothetical protein BIFDEN_01238 [Bifidobacterium dentium ATCC
           27678]
 gi|283102214|gb|ADB09320.1| Permease protein of ABC transporter system for sugars
           [Bifidobacterium dentium Bd1]
 gi|283103383|gb|ADB10489.1| permease protein of ABC transporter system for sugars
           [Bifidobacterium dentium Bd1]
          Length = 330

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 3/204 (1%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+  G  +     +V  FTY   ++  W    T+  VV     A+++ I  G  +
Sbjct: 87  FTSTFGLGFGKTFALWDNVVTVFTYDGGIFGRWF-LNTVLYVVAGAGGATLLAIMGGYGL 145

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   +      + A + P            +  +L    W  ++    + + +   
Sbjct: 146 AKFRFPGRRAVFVVVIGAISVPGIALAVPQFLLFAKLNLTNTPWAMVIPSLVSTFGLYLM 205

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P +  E A       +R +  + LP + P  VT A+ A    W N  +   +
Sbjct: 206 WIFSDQAVPTELLEAARVDGAGEFRTFFQVSLPLLAPGIVTTALFAIVATWNNYFLPLIM 265

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG 550
                 +  T GL  +  +++  G
Sbjct: 266 LKDSDWYPLTIGLNQWKDQASTAG 289



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-SIPILGFLTFTVV 121
           ++   T L +++    + L   +     AK R  G   V ++ I   S+P +       +
Sbjct: 118 RWFLNTVLYVVAGAGGATLLAIMGGYGLAKFRFPGRRAVFVVVIGAISVPGIALAVPQFL 177

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R      ++ F+
Sbjct: 178 LFAKLNLTNTP----WAMVIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFF 233

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 234 QVSLPLLAPGIVTTALFAIVATWN 257


>gi|330831024|ref|YP_004393976.1| D-methionine ABC transporter permease [Aeromonas veronii B565]
 gi|328806160|gb|AEB51359.1| D-methionine ABC transporter, permease protein [Aeromonas veronii
           B565]
          Length = 217

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L      T + + ++ +   L           ++   ++  P+L+        + +S+P 
Sbjct: 9   LITALGDTLIMVFASALFGCLLGLPLGVALHVTKAGQILANPLLNRTLGMVVNVGRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++    L  G  IG  +AAI  +    +  +   +  +L  +P  L E +++ 
Sbjct: 68  FIILLVAIIPLTRLIVGTSIGT-IAAIVPLTVGCIPFIARLVEGALMEVPDGLLEAAKAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                Q    + +P ++PG++ ++ +++
Sbjct: 127 GAKPLQIITKVLLPEALPGILNSVTITL 154



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 12/147 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    +   ++ +P+G+         I   P ++  +     +  + P  +   + 
Sbjct: 16  TLIMVFASALFGCLLGLPLGVALHVTKAGQILANPLLNRTLGMVVNVGRSVPFIILL-VA 74

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  ++   +  ++     ++    G   +I   V       P+   E A +      +  
Sbjct: 75  IIPLTRLIVGTSIGTIAAIVPLTVGCIPFIARLVEGALMEVPDGLLEAAKAMGAKPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNAS 521
             ++LP   P  +           N S
Sbjct: 135 TKVLLPEALPGILNSVTITLVTLVNYS 161


>gi|255325923|ref|ZP_05367015.1| phosphate ABC transporter, permease protein PstA [Corynebacterium
           tuberculostearicum SK141]
 gi|311740224|ref|ZP_07714056.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255297135|gb|EET76460.1| phosphate ABC transporter, permease protein PstA [Corynebacterium
           tuberculostearicum SK141]
 gi|311304779|gb|EFQ80850.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 304

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 10/187 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    LV  +  ++  G      P +        +   S    A+   +      +++ +
Sbjct: 41  LAMVPLVWVLWELIARGSGVILNP-EWWTASQRGIMNSSAGGGAAHAIVGTFVQTILASV 99

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +       A       K   LG +   ++DI+  +P +    F    ++ L+     G 
Sbjct: 100 ISIPIGIFTAIYLVEYSKGGWLGRITTFMVDILSGVPSIVAALFIFAMWITLFGFGRSGF 159

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +A    +    +  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V 
Sbjct: 160 AVALSLVLLMIPI--VVRNTEEMLRVVPMDLREASYALGVPKWKTIARIVLPTALSGIVT 217

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 218 GIMLAIA 224



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 21/190 (11%)

Query: 346 IFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVIWLGCIT----------MFRVVVL 393
           + W  ++  +   + + W+ I          +       G +           +    V 
Sbjct: 34  VVWGAMILAMVPLVWVLWELIARGSGVILNPEWWTASQRGIMNSSAGGGAAHAIVGTFVQ 93

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYY 444
            I+AS+I IP+GI+             +         +L+  P+     F   +    + 
Sbjct: 94  TILASVISIPIGIFTAIYLVEYSKGGWLGRITTFMVDILSGVPSIVAALFIFAMWITLFG 153

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                  ++L ++      ++ N        P D +E + +  +  W+    I+LP    
Sbjct: 154 FGRSGFAVALSLVLLMIPIVVRNTEEMLRVVPMDLREASYALGVPKWKTIARIVLPTALS 213

Query: 505 YYVTGAITAC 514
             VTG + A 
Sbjct: 214 GIVTGIMLAI 223


>gi|226354828|ref|YP_002784568.1| proline/glycine betaine [Deinococcus deserti VCD115]
 gi|226316818|gb|ACO44814.1| putative proline/glycine betaine ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 239

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 13/180 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L + +++ +   LL G     +    +  +P T +   L Q        +L A  + LL 
Sbjct: 13  LWWPVLLCVS--LLPGTLPALLRPLGLGELPATFEPA-LWQLTLTHLGLVLLATALVLLL 69

Query: 83  TFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               A LA +  R  L  +   +  + Q++P    L   V      +   ++G       
Sbjct: 70  GVPLAVLATRPDREALRHLTEALAGLGQTVPTFAILALAVPALGFGWKPTLLG------- 122

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +  +    L  +     + +R   ++ WQ+   + +P + P L+  +  SM
Sbjct: 123 -LVVYGLMPVLGNGVAGLRQVDPGALDAARGMGMTAWQRLRRVELPLAWPVLLAGIRTSM 181



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 7/184 (3%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVV 392
              + R+      +   +   +  G     +  +            +W   +T +  V++
Sbjct: 2   PLKSPRLPSAALWWPVLLCVSLLPGTLPALLRPLGLGELPATFEPALWQLTLTHLGLVLL 61

Query: 393 LIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
              +  ++ +P+ +      R  +    +  A L    P      L V  + +      L
Sbjct: 62  ATALVLLLGVPLAVLATRPDREALRHLTEALAGLGQTVPTFAILALAVPALGFGWKPTLL 121

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L +  +      +L N +AG         + A    +T W+  R + LP  +P  + G 
Sbjct: 122 GLVVYGLM----PVLGNGVAGLRQVDPGALDAARGMGMTAWQRLRRVELPLAWPVLLAGI 177

Query: 511 ITAC 514
            T+ 
Sbjct: 178 RTSM 181


>gi|217968823|ref|YP_002354057.1| phosphate ABC transporter inner membrane subunit PstC [Thauera sp.
           MZ1T]
 gi|217506150|gb|ACK53161.1| phosphate ABC transporter, inner membrane subunit PstC [Thauera sp.
           MZ1T]
          Length = 308

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 92/296 (31%), Gaps = 24/296 (8%)

Query: 314 KKLCRTLGV-IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           ++L R L   +R    E  L L ++  V   + I W  +              ++ +   
Sbjct: 11  ERLSRKLSRNVRERAIELVLFLAASVSVLTTIGIIWILIFESYHFFEHVPVWDFLTDTMW 70

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLA 426
                   +     +   V   ++A  + +P+G  I         P +   ++PF +LL 
Sbjct: 71  TPLFSTPRYGILPLLLGTVTTSLVALAVAVPLGTVIAIYISEFASPRVREIVKPFLELLG 130

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P  V+         P++            L   L+M      YI         A P  
Sbjct: 131 GVPTIVYGYFALTVVSPVLQYFFPSLPGFSMLAAGLVMGIAIVPYISSLSEDAMRAVPMS 190

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVT----GAITACGGAWNASIVSEVAS--WGHI 532
            +E A +   T ++    ++LP      ++    G   A G     ++ + +        
Sbjct: 191 LREGAYAMGSTRFQTAVRVVLPAAISGVLSAYILGISRAVGETMIVAVAAGMQPNFTMDP 250

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLG--VLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                 + AYI +    G  P   +G   +      L L    ++ +     R  R
Sbjct: 251 TQPAQTISAYIVQV-AMGDLPHGSIGYQSIFAAGLSLMLLTLFFNIMGHLIRRRYR 305



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 17/218 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF- 115
                  L  ++  +++L       T+ A       S R+  ++ P L+++  +P + + 
Sbjct: 79  YGILPLLLGTVTTSLVALAVAVPLGTVIAIYISEFASPRVREIVKPFLELLGGVPTIVYG 138

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              LT         +P     + LAA   +  + V  ++     ++  +P  L E + + 
Sbjct: 139 YFALTVVSPVLQYFFPSLPGFSMLAAGLVMGIAIVPYISSLSEDAMRAVPMSLREGAYAM 198

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG----WFFVVASEMIVVGDTVIPLPG--IG 226
             + +Q    + +P ++ G++   ++ +S          VA+ M          P   I 
Sbjct: 199 GSTRFQTAVRVVLPAAISGVLSAYILGISRAVGETMIVAVAAGMQPNFTMDPTQPAQTIS 258

Query: 227 SYIAL-AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
           +YI   A+ +    +I Y  +   G+  +   L F  M
Sbjct: 259 AYIVQVAMGDLPHGSIGYQSIFAAGLSLMLLTLFFNIM 296


>gi|223043281|ref|ZP_03613328.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           capitis SK14]
 gi|222443492|gb|EEE49590.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           capitis SK14]
          Length = 308

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 106/294 (36%), Gaps = 24/294 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VH 59
           N      S +I P I  +++ + ++  I IL   + ET      V      L        
Sbjct: 15  NAKKGGASDKIVPIILGIISAISILTTIAILFTLLTETITFFTRVPFSKFFLTGTWNPTG 74

Query: 60  SLPQYASRTTL-RMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPI 112
           S P+Y     +   L    I+ + +      AA       S R   ++ PIL+I+  IP 
Sbjct: 75  SNPEYGIWALIIGTLKITFIATIVSVPIGLGAAIYLNEYASDRTRRIIKPILEILAGIPT 134

Query: 113 LGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + F    LTF      ++ PG      ++    +    V  +T     ++ ++P  + E 
Sbjct: 135 IVFGFFALTFVTPILRSIIPGLGEFNSISPGIVVGIMIVPIITSLSEDAMSSVPNKIREG 194

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--- 225
           +     + ++    + +P +  G+V ++++ +S      +   +         L      
Sbjct: 195 AYGLGATKFEVATKVVLPAATSGVVASIVLGVSRAIGETMIVSLAAGSTPTSSLSLTSSI 254

Query: 226 ----GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
               G  + +A  +    + +Y  +  +G       ++   +  W S +FR E 
Sbjct: 255 QTMTGYIVEVATGDAPFGSDIYYSIYAVGFTLFIFTIIMNLLSQWISKRFREEY 308



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 21/173 (12%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  +  Y IW   I   ++     IA+I+ +P+G+                 I+P  +
Sbjct: 71  NPTGSNPEYGIWALIIGTLKITF---IATIVSVPIGLGAAIYLNEYASDRTRRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +       ++   +++       I        S+ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPILRSIIPGLGEFNSISPGIVVGIMIVPIITSLSEDAMSSV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGI----FPYYVTGAITACGGAWNASIVS 524
           PN  +E A     T +     ++LP          V G   A G     S+ +
Sbjct: 188 PNKIREGAYGLGATKFEVATKVVLPAATSGVVASIVLGVSRAIGETMIVSLAA 240


>gi|254469630|ref|ZP_05083035.1| ABC transporter, permease protein [Pseudovibrio sp. JE062]
 gi|211961465|gb|EEA96660.1| ABC transporter, permease protein [Pseudovibrio sp. JE062]
          Length = 232

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 15/157 (9%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
           I ++ Q+ P +  L   V          ++   L  I  IF         +    L  +P
Sbjct: 76  IANMGQTFPPVAVLALAVPMLGFGSGPTLVALFLYGILPIFE--------NTMTGLSTLP 127

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
               E +R   LS  Q+ + + +P ++P ++  + +S       VV +       + +  
Sbjct: 128 PATMEAARGIGLSRRQRLFQVELPLALPLILTGIRLS-------VVIAIGTATIGSTVAA 180

Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +G  I   +   +   +L   L +     L    L
Sbjct: 181 RTLGEVIIAGLLTNNTAYVLQGGLIVGLFAVLIYDAL 217



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
            A +   FP      L V  + +      + L L  I      I  N + G S  P    
Sbjct: 76  IANMGQTFPPVAVLALAVPMLGFGSGPTLVALFLYGIL----PIFENTMTGLSTLPPATM 131

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A    ++  +    + LP   P  +TG   +   A   + +          +    LG
Sbjct: 132 EAARGIGLSRRQRLFQVELPLALPLILTGIRLSVVIAIGTATIG-------STVAARTLG 184

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I       +   V+ G LI+  F + +
Sbjct: 185 EVIIAGLLTNNTAYVLQGGLIVGLFAVLI 213


>gi|182418866|ref|ZP_02950123.1| phosphate ABC transporter, permease protein PstA [Clostridium
           butyricum 5521]
 gi|237668092|ref|ZP_04528076.1| phosphate ABC transporter, permease protein PstA [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377149|gb|EDT74717.1| phosphate ABC transporter, permease protein PstA [Clostridium
           butyricum 5521]
 gi|237656440|gb|EEP53996.1| phosphate ABC transporter, permease protein PstA [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 294

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 73/185 (39%), Gaps = 5/185 (2%)

Query: 20  FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
             +    L+   I  +L+       P  +     I+     +      +   ++ +++I+
Sbjct: 17  ISIFIVTLLGAFIAYILYKGGSMLKPSFLFGKPKISGAGGGIGPQLFNSFYMLIISLLIT 76

Query: 80  LLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +          A+  + G ++  I   L+ M S+P +    F ++ F+N+       + L
Sbjct: 77  IPIGIGAGIYLAEYAKQGPIVNFIRICLETMSSLPSIVIGMFGLLVFVNMAGWGY--SIL 134

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A   ++    + +MT     ++ +  + ++E S     + WQ    L +P +M  ++  +
Sbjct: 135 AGALSVSILNIPSMTRISEDAIKSASKRVKEASLGLGATKWQTIVKLTLPTAMSEIITGI 194

Query: 197 MMSMS 201
           +++  
Sbjct: 195 LLAAG 199



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
            + IF   ++      I ++    +   F +         G I   +F    ++II+ +I
Sbjct: 16  AISIFIVTLLGAFIAYILYKGGSMLKPSFLFGKPKISGAGGGIGPQLFNSFYMLIISLLI 75

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLA-------AFPANV--FFPLVVSCVSYYHLNPNLW 451
            IP+GI  G      +K  P    +        + P+ V   F L+V           L 
Sbjct: 76  TIPIGIGAGIYLAEYAKQGPIVNFIRICLETMSSLPSIVIGMFGLLVFVNMAGWGYSILA 135

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L +       +         +     KE +     T W+    + LP      +TG +
Sbjct: 136 GALSVSILNIPSMTRISEDAIKSASKRVKEASLGLGATKWQTIVKLTLPTAMSEIITGIL 195

Query: 512 TACGGAWN 519
            A G  + 
Sbjct: 196 LAAGRIFG 203


>gi|254453463|ref|ZP_05066900.1| phosphate ABC transporter, permease protein PstA [Octadecabacter
           antarcticus 238]
 gi|198267869|gb|EDY92139.1| phosphate ABC transporter, permease protein PstA [Octadecabacter
           antarcticus 238]
          Length = 437

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 55/150 (36%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   M   + ++L      +      A+   +  V+   +  + ++P +
Sbjct: 204 EAAGLGVAILGSLYMMAVVLCLALPIGVAASIYLEEFARKSWITDVIEVNIANLAAVPSI 263

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N +      + L     +    +  +  S   SL +IP  + + +    
Sbjct: 264 VYGILGLAIFIN-FAELNQSSPLVGGLVLTLMTLPTIIISTRASLKSIPPSIRDAALGVG 322

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P + PG++   ++ ++  
Sbjct: 323 ASKMQSVFHHVLPLAAPGILTGTIIGLAQA 352



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 6/233 (2%)

Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350
              F RFI        +    N+    R  G  +         L  N   + ++      
Sbjct: 120 GATFRRFILADPEAAGTTFQLNLLANGRIDGYFKGRVTAQTALLDQNVTPAQLVLADRLA 179

Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-- 408
               +     W             +   +      +++ + V++ +A  I +   I++  
Sbjct: 180 DQGALVKRFNWAFFTNPDASDQRPEAAGLGVAILGSLYMMAVVLCLALPIGVAASIYLEE 239

Query: 409 -GFRPHISSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLS--LLMIFGTQWYI 464
              +  I+  I+     LAA P+ V+  L +   +++  LN +  L   L++   T   I
Sbjct: 240 FARKSWITDVIEVNIANLAAVPSIVYGILGLAIFINFAELNQSSPLVGGLVLTLMTLPTI 299

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           + +  A   + P   ++ A     +  +   + +LP   P  +TG I     A
Sbjct: 300 IISTRASLKSIPPSIRDAALGVGASKMQSVFHHVLPLAAPGILTGTIIGLAQA 352


>gi|323490094|ref|ZP_08095315.1| phosphate ABC transporter, permease protein PstA [Planococcus
           donghaensis MPA1U2]
 gi|323396390|gb|EGA89215.1| phosphate ABC transporter, permease protein PstA [Planococcus
           donghaensis MPA1U2]
          Length = 292

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML     S++     A      AK  R+   +   +  +  +P + F    +  F+
Sbjct: 78  SLWLMLVVAPTSIILGVGSAIYLEEYAKQNRITTFIRMNISNLAGVPSVVFGLLGLTIFV 137

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + LAA F +    +  +  S  +++ ++PR+L + S     + WQ    + 
Sbjct: 138 RALA--LGNSVLAAGFTMSLLILPVIVVSSQEAIRSVPRELRDASFGMGATKWQTIIKII 195

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++++S  
Sbjct: 196 LPAAIPGILTGSILALSRA 214



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 5/137 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSC 440
           +++ ++V+   + I+ +   I++     +  I++ I+     LA  P+ VF    L +  
Sbjct: 78  SLWLMLVVAPTSIILGVGSAIYLEEYAKQNRITTFIRMNISNLAGVPSVVFGLLGLTIFV 137

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +    N  L     M       I+ +      + P + ++ +     T W+    IILP
Sbjct: 138 RALALGNSVLAAGFTMSLLILPVIVVSSQEAIRSVPRELRDASFGMGATKWQTIIKIILP 197

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG+I A   A
Sbjct: 198 AAIPGILTGSILALSRA 214


>gi|291532218|emb|CBL05331.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Megamonas hypermegale ART12/1]
          Length = 291

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 58/158 (36%), Gaps = 5/158 (3%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDI 106
                +   + +      T   +  ++++S+          A   K  +    L   ++ 
Sbjct: 45  TPNMFSFTRNGIGNLFFNTIYLVFLSLLVSVPLGIAAGIYMAEYAKPGKTTKFLRICIET 104

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           + S+P +    F  + F+ +   +      A   A+    +  +T     +  ++P   +
Sbjct: 105 LSSLPSIVVGLFGYLVFIVMTGSQWNL--FAGALAVSILSLPLITTVTEDAFRSLPPGYK 162

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
           + S     + WQ   Y+ +P  MP ++  ++++   G+
Sbjct: 163 KGSMGMGATLWQTIRYVMLPACMPRIMTGVILAAGRGF 200



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 13/184 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIV----NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
           F VV G  + +      Y++     +FT     +         F  + L+ ++ ++ +P+
Sbjct: 18  FYVVAGFFLLLLLAFTLYVIIKGFANFTPNMFSFTRNGIGNLFFNTIYLVFLSLLVSVPL 77

Query: 405 GIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLL 455
           GI  G            +  ++   + L++ P+ V   F  +V  V           +L 
Sbjct: 78  GIAAGIYMAEYAKPGKTTKFLRICIETLSSLPSIVVGLFGYLVFIVMTGSQWNLFAGALA 137

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           +   +   I         + P  +K+ +     T W+  RY++LP   P  +TG I A G
Sbjct: 138 VSILSLPLITTVTEDAFRSLPPGYKKGSMGMGATLWQTIRYVMLPACMPRIMTGVILAAG 197

Query: 516 GAWN 519
             + 
Sbjct: 198 RGFG 201


>gi|300780500|ref|ZP_07090356.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium genitalium ATCC 33030]
 gi|300534610|gb|EFK55669.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium genitalium ATCC 33030]
          Length = 357

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 85/258 (32%), Gaps = 27/258 (10%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL------GCITMFRVVVLII 395
           ++  I     +  +   +  + IG I++   + + +               +   +V  +
Sbjct: 88  WLAMILALIPLGWLLFTLVSRGIGPILDVDWWTEDMGGARTRAPGGGAAHAIVGTLVQTL 147

Query: 396 IASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYYHL 446
           IAS+  IP+G++             +         +L+  P+     F   +        
Sbjct: 148 IASLFSIPIGVFTAIYLVEYSGGNRLGKLTTFMVDILSGVPSIVSALFIYALWITILGQE 207

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                ++L +I      ++ N        P D +E   +  +  W+    I+LP      
Sbjct: 208 RSGFAVALSLILLMVPIVVRNTEEMLRVVPMDLREATYALGVPKWKTIVRIVLPTALSGI 267

Query: 507 VTGAITA----CGGAWNASIVSE----VASWGHIHLRTTGLGAYIAESTEKGS----FPE 554
           VTG + A     G +    I+      + ++       + L  ++ +  + GS       
Sbjct: 268 VTGIMLAVARVMGESAPVLILVGSTKVMNAFNIFEGPQSSLPLFMLDMWKSGSAQAVTDR 327

Query: 555 VVLGVLIMCCFVLALNRF 572
           +    L +   V+ALN  
Sbjct: 328 LWGAALTLVLIVVALNLL 345



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T ++ L A + S+      A    +     RLG +   ++DI+  +P +    F    ++
Sbjct: 142 TLVQTLIASLFSIPIGVFTAIYLVEYSGGNRLGKLTTFMVDILSGVPSIVSALFIYALWI 201

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +   +  G   A   ++    V  +  +  + L  +P DL E + +  +  W+    + 
Sbjct: 202 TILGQERSG--FAVALSLILLMVPIVVRNTEEMLRVVPMDLREATYALGVPKWKTIVRIV 259

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++ G+V  +M++++
Sbjct: 260 LPTALSGIVTGIMLAVA 276


>gi|312888611|ref|ZP_07748180.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311298925|gb|EFQ76025.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 281

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 15/191 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLII 395
           +   +    +VC   + I W          +++ +  +             +   V+L +
Sbjct: 11  WGTLLLSTGIVCFFLVVILWDLFSKGAPSLSWEFISSLPQQSMTKGGILPAITGTVLLTL 70

Query: 396 IASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHL 446
           I +++  P GI              ++  I+   + LA  P+ ++  F L +        
Sbjct: 71  ITALVAAPFGICCAIYLNEYAANTWLTRLIRASIRNLAGVPSIIYGLFGLALFVQGLSMG 130

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              L   L +   +  YI+          P   +E A +   T +   R ++LP   P  
Sbjct: 131 TSLLPAGLTLGLLSLPYIIITTEEALRRIPGSMREAALALGATKFESIRDVVLPSALPGM 190

Query: 507 VTGAITACGGA 517
           +TG +     A
Sbjct: 191 LTGLVLTLSRA 201



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++ F LV+ + ++   G    +    I  +   ++    +    + T L  L   +++ 
Sbjct: 19  GIVCFFLVVILWDLFSKGAPSLSWEF-ISSLPQQSMTKGGILPAITGTVLLTLITALVAA 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F    A      A +  L  ++   +  +  +P + +  F +  F+      +  + L 
Sbjct: 78  PFGICCAIYLNEYAANTWLTRLIRASIRNLAGVPSIIYGLFGLALFVQGL--SMGTSLLP 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  +  +  ++L  IP  + E + +   + ++    + +P ++PG++  ++
Sbjct: 136 AGLTLGLLSLPYIIITTEEALRRIPGSMREAALALGATKFESIRDVVLPSALPGMLTGLV 195

Query: 198 MSMSGG 203
           +++S  
Sbjct: 196 LTLSRA 201


>gi|257869065|ref|ZP_05648718.1| phosphate ABC transporter [Enterococcus gallinarum EG2]
 gi|257803229|gb|EEV32051.1| phosphate ABC transporter [Enterococcus gallinarum EG2]
          Length = 294

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 8/199 (4%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYA 65
              S +I   +   +A ++V+ + ++LL+ +                    +   +    
Sbjct: 3   AKRSDKIATGVLYAVAGIIVLILASLLLYILVRGIPHISWEFLTSPSKAYQEGGGIGIQL 62

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             +   +L  M+IS   +          AK      V+   ++I+ S+P +    F  + 
Sbjct: 63  FNSLYLLLVTMIISFPISLGAGIYLSEYAKKNWFTDVVRTSIEILSSLPSVVVGLFGFLV 122

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +         A     F   +  +T ++ +SL  I     E   S  LS W+    
Sbjct: 123 FVIQFGYGFSIISGALALTFFNLPL--LTRNVEESLQAIHYTQREAGLSLGLSRWETVMR 180

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           + VP + PG++  +++S  
Sbjct: 181 IIVPEATPGILTGVILSSG 199



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIW 381
           +    + +++  +      ++  +   +    +   + H ++          Q+   +  
Sbjct: 1   MNAKRSDKIATGVLYAVAGIIVLILASLLLYILVRGIPHISWEFLTSPSKAYQEGGGIGI 60

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPL 436
               +++ ++V +II+  I +  GI++         +  ++   ++L++ P+ V   F  
Sbjct: 61  QLFNSLYLLLVTMIISFPISLGAGIYLSEYAKKNWFTDVVRTSIEILSSLPSVVVGLFGF 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +V  + + +    +  +L + F     +  NV     A     +E   S  ++ W     
Sbjct: 121 LVFVIQFGYGFSIISGALALTFFNLPLLTRNVEESLQAIHYTQREAGLSLGLSRWETVMR 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           II+P   P  +TG I + G  + 
Sbjct: 181 IIVPEATPGILTGVILSSGRIFG 203


>gi|218698727|ref|YP_002406356.1| taurine dioxygenase, 2-oxoglutarate-dependent [Escherichia coli
           IAI39]
 gi|218368713|emb|CAR16453.1| taurine dioxygenase, 2-oxoglutarate-dependent [Escherichia coli
           IAI39]
          Length = 375

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             ++ILPG  P  +TG     G  W+  + +E+ +       T GLG  +  + E  +  
Sbjct: 2   LWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATD 55

Query: 554 EVVLGVLIMCCFVLALN---RFLWHPL 577
            V+ G+ ++      L    R L   L
Sbjct: 56  VVLAGIAVIAIIAFLLELGLRALQRRL 82



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 6/53 (11%)

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
            W++ +P ++P ++  + + +  GW  +VA+E+I          G+G  +  A
Sbjct: 2   LWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 48


>gi|167761527|ref|ZP_02433654.1| hypothetical protein CLOSCI_03938 [Clostridium scindens ATCC 35704]
 gi|167661193|gb|EDS05323.1| hypothetical protein CLOSCI_03938 [Clostridium scindens ATCC 35704]
          Length = 287

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    V+    ++   +         +     +L   S         +  ++   +SL+
Sbjct: 27  LVVLSAVLTFTVLIFLIVYILIHGIPYIKPSLFSLTYTSENASLMPALINTIAMTFLSLV 86

Query: 82  FTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
               +           A +  R   ++    + +  IP + +  F +++F+         
Sbjct: 87  IAVPFGIFSAIFLVEYAGRGNRFIEIIRLTTETLSGIPSIVYGLFGMLFFVTACGWGF-- 144

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + LA  F +    +  +  +  ++L ++P    E S        +  + + +P ++PG++
Sbjct: 145 SMLAGAFTLSIMILPLIMRTTEEALKSVPDSFREGSFGLGAGKLRTVFRIVLPSAVPGIL 204

Query: 194 WNMMMSMS 201
             +++++ 
Sbjct: 205 AGIILAVG 212



 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 83/271 (30%), Gaps = 9/271 (3%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
              K+  ++       F    L + S      +L      ++      I           
Sbjct: 6   ERFKQRLKSYARTPGSFIVMLLVVLSAVLTFTVLIFLIVYILIHGIPYIKPSLFSLTYTS 65

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430
                +  +I    +T   +V+ +       I +  + G        I+   + L+  P+
Sbjct: 66  ENASLMPALINTIAMTFLSLVIAVPFGIFSAIFLVEYAGRGNRFIEIIRLTTETLSGIPS 125

Query: 431 NVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            V+  F ++    +       L  +  +       I+        + P+ F+E +     
Sbjct: 126 IVYGLFGMLFFVTACGWGFSMLAGAFTLSIMILPLIMRTTEEALKSVPDSFREGSFGLGA 185

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWN--ASIVSEVASWGHIHLRTTGLGAYIAE- 545
              R    I+LP   P  + G I A G      A+++    +   +     G G  +A  
Sbjct: 186 GKLRTVFRIVLPSAVPGILAGIILAVGRIVGETAALIYTAGTVADVPNGVMGSGRTLAVH 245

Query: 546 ----STEKGSFPEVVLGVLIMCCFVLALNRF 572
               ++E     +     +I+   V+ +N  
Sbjct: 246 MYNLASEGLYMDQAYATAVILLLLVVGINTL 276


>gi|291537786|emb|CBL10897.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Roseburia intestinalis XB6B4]
          Length = 297

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPI 112
           D  S+      T    + A+++S+ F    A    +  + G  LV I+ +    +  IP 
Sbjct: 75  DNVSMLPAMINTLFMTVLALLLSVPFGVGAAIYLVEYAKKGNKLVGIIRVTAETLSGIPS 134

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + +  F +++F+            AA  AI    V  +  +  ++L  +P    E S   
Sbjct: 135 IIYGLFGMLFFVTALKWGYSMMAGAATLAIMVLPV--IMRTTEEALLCVPDSFREGSFGL 192

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
                +  + + +P ++PG++  +++++ 
Sbjct: 193 GAGKLRTIFKIVLPSAIPGILSGIILAIG 221



 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFT----YQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404
             V+  +   I  + I Y+           D + ++     T+F  V+ ++++    +  
Sbjct: 45  VGVLVFLVGYILIRGIPYLKPSLFAWTYNSDNVSMLPAMINTLFMTVLALLLSVPFGVGA 104

Query: 405 GIWIGFRPHISSKIQPFA----QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I++       +K+        + L+  P+ ++    +  + ++        S++    T
Sbjct: 105 AIYLVEYAKKGNKLVGIIRVTAETLSGIPSIIY---GLFGMLFFVTALKWGYSMMAGAAT 161

Query: 461 QWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              ++  VI           P+ F+E +        R    I+LP   P  ++G I A G
Sbjct: 162 LAIMVLPVIMRTTEEALLCVPDSFREGSFGLGAGKLRTIFKIVLPSAIPGILSGIILAIG 221


>gi|240103493|ref|YP_002959802.1| ABC-type transport system protein, permease component [Thermococcus
           gammatolerans EJ3]
 gi|239911047|gb|ACS33938.1| ABC-type transport system protein, permease component [Thermococcus
           gammatolerans EJ3]
          Length = 250

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 72/187 (38%), Gaps = 3/187 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L   +  +I+LLF      + A+   LG     ++  +  +PI+   +   +  +  +
Sbjct: 55  SLLTATATALIALLFGVPLGYVLARKDFLGK---SLVQALIDVPIVIPHSVVGIMLLVTF 111

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              ++ +    I A+          +       +   LE V+R+   S  + F+ + +P 
Sbjct: 112 SSAILDSYTGIIAAMLFVSAPFTINASRDGFLAVDEKLEAVARTLGASRLRVFFSVSLPI 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           ++P +    +M+ +     V A  ++        +  +  +    ++    +A+L   ++
Sbjct: 172 ALPSVASGAIMTWARAISEVGAILIVAYYPKTAQVLILEYFNNYGLRASRPIAVLMVTIS 231

Query: 248 MLGVIFL 254
           +   + L
Sbjct: 232 LTIFVLL 238



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 4/224 (1%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I +  +   V        +G +V       V   +    +T        +IA +  +P+G
Sbjct: 18  IAYIALPLVVIFAKQLSDLGMLVRTLHDPYVTEALRNSLLTA---TATALIALLFGVPLG 74

Query: 406 IWIGFRPHISS-KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
             +  +  +    +Q    +    P +V   +++   S   L+    +   M+F +  + 
Sbjct: 75  YVLARKDFLGKSLVQALIDVPIVIPHSVVGIMLLVTFSSAILDSYTGIIAAMLFVSAPFT 134

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           +     G  A     + VA +   +  R +  + LP   P   +GAI     A +     
Sbjct: 135 INASRDGFLAVDEKLEAVARTLGASRLRVFFSVSLPIALPSVASGAIMTWARAISEVGAI 194

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            + ++     +   L  +            V++  + +  FVL 
Sbjct: 195 LIVAYYPKTAQVLILEYFNNYGLRASRPIAVLMVTISLTIFVLL 238


>gi|189485396|ref|YP_001956337.1| ABC-type phosphate transporter permease component [uncultured
           Termite group 1 bacterium phylotype Rs-D17]
 gi|170287355|dbj|BAG13876.1| ABC-type phosphate transporter permease component [uncultured
           Termite group 1 bacterium phylotype Rs-D17]
          Length = 289

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 14/212 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           + +++ IF F    G +    +  I +I   F Y       +     +   V++ + A I
Sbjct: 21  IVFVILIFGFLFKEGFSFFKDFGIIKFITGQFWYPTSDTKSFGILPLIIGSVLVTVGACI 80

Query: 400 IWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYH 445
           I +P+GI             +   ++   +L+AA P+ V          P V +  +   
Sbjct: 81  IMVPIGIMTALYISEIAPKGVRDVLKSLVELMAAIPSIVIGFVGMVTLVPFVRTLFNIPT 140

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  S+++ F     I+        + P  +KE A +   T W+  R I+L    P 
Sbjct: 141 GLTAFSGSIMLAFMAMPTIVTISEDAIRSVPCQYKEGALALGATKWQTIRRIVLKAAMPG 200

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   +   G     ++   + +     +  +
Sbjct: 201 IIAAIMLGIGRVIGETMAVMMITGNSARIPHS 232



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 66/164 (40%), Gaps = 14/164 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILG--------FLT 117
           + L  + A +I +    + A   ++   + +  VL  ++++M +IP +          + 
Sbjct: 71  SVLVTVGACIIMVPIGIMTALYISEIAPKGVRDVLKSLVELMAAIPSIVIGFVGMVTLVP 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F    F        + A   +I   F +    +T S   ++ ++P   +E + +   + W
Sbjct: 131 FVRTLF---NIPTGLTAFSGSIMLAFMAMPTIVTISE-DAIRSVPCQYKEGALALGATKW 186

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
           Q    + +  +MPG++  +M+ +       +A  MI      IP
Sbjct: 187 QTIRRIVLKAAMPGIIAAIMLGIGRVIGETMAVMMITGNSARIP 230


>gi|145223697|ref|YP_001134375.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315444024|ref|YP_004076903.1| ABC-type proline/glycine betaine transporter, permease
           [Mycobacterium sp. Spyr1]
 gi|145216183|gb|ABP45587.1| binding-protein-dependent transport systems inner membrane
           component [Mycobacterium gilvum PYR-GCK]
 gi|315262327|gb|ADT99068.1| ABC-type proline/glycine betaine transport system, permease
           component [Mycobacterium sp. Spyr1]
          Length = 269

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 69/213 (32%), Gaps = 12/213 (5%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105
           R +       ++  ++     +  L   +   I L        L   +R    VL P+  
Sbjct: 55  RQLTATQLENINPGNVATLIWQHLLITAAVTAIVLAIGIPLGVLV--TRPGAKVLRPLFV 112

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            + ++   G     +   + L+           +  I    +  +  S    +  + R L
Sbjct: 113 GIANV---GQAAPAIGLLVLLFLLTAQTGFWIGVLPIALYSLLPVLSSTILGIDQVDRSL 169

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +      +S       + +P ++P ++  +  S       +V +        ++   G+
Sbjct: 170 LDAGLGQGMSRRSLLLRVELPLAVPYILAGLRTS-------LVLAVGTATLSFLVNAGGL 222

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           G  I    K QD + ++   +  + +  L D L
Sbjct: 223 GILIDTGYKLQDNVTLILGSVLAVCLALLVDWL 255



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 13/210 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           Q     + +    +V  +IW   +    V  +++    I IP+G+ +      +  ++P 
Sbjct: 56  QLTATQLENINPGNVATLIWQHLLITAAVTAIVL---AIGIPLGVLV--TRPGAKVLRPL 110

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL-MIFGTQWYILFNVIAGASAFPNDFK 480
              +A          ++  +         W+ +L +   +   +L + I G         
Sbjct: 111 FVGIANVGQAAPAIGLLVLLFLLTAQTGFWIGVLPIALYSLLPVLSSTILGIDQVDRSLL 170

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           +      ++       + LP   PY + G  T+   A   + +S + + G       GLG
Sbjct: 171 DAGLGQGMSRRSLLLRVELPLAVPYILAGLRTSLVLAVGTATLSFLVNAG-------GLG 223

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
             I    +      ++LG ++  C  L ++
Sbjct: 224 ILIDTGYKLQDNVTLILGSVLAVCLALLVD 253


>gi|315648813|ref|ZP_07901908.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus vortex V453]
 gi|315275781|gb|EFU39133.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus vortex V453]
          Length = 291

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 70/186 (37%), Gaps = 9/186 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + ++ +I  ++        P    +      D   L      T   +L    +S + 
Sbjct: 32  IGILALMALIVTIVMDGVHRLSPELFTNFPSRIADKAGLKSPIVGTIYLLLLMAPLSFIL 91

Query: 83  TFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
               A      A +SR +  ++   +  +  +P + +    +  F+    G  +G  L +
Sbjct: 92  GVGAAIFLEEYAGRSRWV-RLIQLNISTLAGVPSIIYGILGLAIFV---RGMNLGRSLLS 147

Query: 139 IFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
                T  V  +     Q +L  +P++  + S +   + WQ      +P ++PG++  ++
Sbjct: 148 GVLTMTLLVLPIIIVAAQEALRAVPKNRRDASYALGATKWQTVSSAVLPSAIPGIMTGVI 207

Query: 198 MSMSGG 203
           +++S  
Sbjct: 208 LALSRA 213



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI----GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T++ ++++  ++ I+ +   I++    G    +   IQ     LA  P+ ++  L ++  
Sbjct: 77  TIYLLLLMAPLSFILGVGAAIFLEEYAGRSRWV-RLIQLNISTLAGVPSIIYGILGLAIF 135

Query: 442 SYY-HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIIL 499
               +L  +L   +L +      I+         A P + ++ + +   T W+     +L
Sbjct: 136 VRGMNLGRSLLSGVLTMTLLVLPIIIVAAQEALRAVPKNRRDASYALGATKWQTVSSAVL 195

Query: 500 PGIFPYYVTGAITACGGA 517
           P   P  +TG I A   A
Sbjct: 196 PSAIPGIMTGVILALSRA 213


>gi|291280545|ref|YP_003497380.1| sulfate/molybdate ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290755247|dbj|BAI81624.1| sulfate/molybdate ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 251

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 4/244 (1%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
           N F    F+ + G+I   L          + +  +  TL    +      T    L A +
Sbjct: 3   NSFGKGLFIFLSGVIIFFLLFPILKLFYSNGLTNILQTLKDKEVIDSILLTFKVSLFATI 62

Query: 78  ISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYFMNLYPG-KVIGAE 135
                    A L A++   G  V+  I+D+   IP        ++ F + +   ++I +E
Sbjct: 63  FVFFTGVPLAYLIARNNFFGKSVVEAIIDLPTMIPHTAAGIAILLAFNSGFLKLQLIDSE 122

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +  IFA+       +     +    +    E V+R+   + +  F  + +P +   +V  
Sbjct: 123 IGIIFAMMFLSAPYLINGAKEGFKKVDVKYEYVARTLGANWFSAFLRVVLPNARRDIVNG 182

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           M+M  + G     A  ++++    +  P +          +    +  AM+ +  +IFL 
Sbjct: 183 MLMMWARGLGEFGA--VVIIAYHPMVAPVLIYDRFNNFGLKYSAPVAAAMILLSIMIFLI 240

Query: 256 DQLL 259
            + L
Sbjct: 241 IRYL 244



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 67/237 (28%), Gaps = 14/237 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLY------VIWLGCITMFRVVVLIIIASIIWI 402
           F  + GV I      I  +       ++L       VI    +T    +   I      +
Sbjct: 10  FIFLSGVIIFFLLFPILKLFYSNGLTNILQTLKDKEVIDSILLTFKVSLFATIFVFFTGV 69

Query: 403 PVGIWIGFRPHISS-KIQPFAQLLAAFPANV-----FFPLVVSCVSYYHLNPNLWLSLLM 456
           P+   I          ++    L    P                +    ++  + +   M
Sbjct: 70  PLAYLIARNNFFGKSVVEAIIDLPTMIPHTAAGIAILLAFNSGFLKLQLIDSEIGIIFAM 129

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +F +  Y++     G       ++ VA +     +  +  ++LP      V G +     
Sbjct: 130 MFLSAPYLINGAKEGFKKVDVKYEYVARTLGANWFSAFLRVVLPNARRDIVNGMLMM--W 187

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           A        V    +  +    L      +        V   ++++   +  + R+L
Sbjct: 188 ARGLGEFGAVVIIAYHPMVAPVLIYDRFNNFGLKYSAPVAAAMILLSIMIFLIIRYL 244


>gi|289422859|ref|ZP_06424691.1| spermidine/putrescine transport system permease protein PotB
           [Peptostreptococcus anaerobius 653-L]
 gi|289156721|gb|EFD05354.1| spermidine/putrescine transport system permease protein PotB
           [Peptostreptococcus anaerobius 653-L]
          Length = 289

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 99/260 (38%), Gaps = 25/260 (9%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY--ASRTTLR 71
           R+           +VI +I ++ +     T    ++  +    DV     +    R+ + 
Sbjct: 17  RLAYPYAVWATIFIVIPLILVVYYSFTRKTDDGGVLFTLANYRDVFDPLFFKVFVRSFVI 76

Query: 72  MLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILD-----IMQSIPILGFLTF----- 118
              A +  ++  +  A + ++   S+   ++++ IL      ++++     ++       
Sbjct: 77  SGLATIACIIIGYPVAYIISRMSPSKSANLIILFILPMWMNFLLRT---YAWIAILGKNG 133

Query: 119 ---TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
              +V+ F  ++P  ++    A +  +  + +  M   +Y SL  + +DL   ++    S
Sbjct: 134 LLNSVLAFFGVHPNSILYTSSAVLLGMVYNFLPFMVLPIYTSLQKMDKDLINAAKDLGAS 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
           G+  F  +  P S+PG++  + M           S ++  G T++    +G  I      
Sbjct: 194 GFTVFKKVVFPLSIPGVMSGITMVFMPCVTTFAISRLLGGGKTML----VGDLIEQQFTT 249

Query: 236 QDLLAILYAMLTMLGVIFLY 255
                   ++  ++ +I L 
Sbjct: 250 VGDWNFGSSLSIVMMIIILV 269



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 10/138 (7%)

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQW----YILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V      H N  L+ S  ++ G  +    +++  +         D    A     +G+  
Sbjct: 138 VLAFFGVHPNSILYTSSAVLLGMVYNFLPFMVLPIYTSLQKMDKDLINAAKDLGASGFTV 197

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI-AESTEKGSF 552
           ++ ++ P   P  ++G             +S +   G   L     G  I  + T  G +
Sbjct: 198 FKKVVFPLSIPGVMSGITMVFMPCVTTFAISRLLGGGKTMLV----GDLIEQQFTTVGDW 253

Query: 553 P-EVVLGVLIMCCFVLAL 569
                L +++M   ++++
Sbjct: 254 NFGSSLSIVMMIIILVSM 271


>gi|19553769|ref|NP_601771.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62391411|ref|YP_226813.1| ABC-type phosphate transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
 gi|21325345|dbj|BAB99966.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41326752|emb|CAF21234.1| ABC-type phosphate transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
          Length = 307

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 8/186 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP---ITLDVHSLPQYASRTTLRMLSAMVI 78
           + A  LV  +  ++  GI                 + L           T ++ +   VI
Sbjct: 44  IAAVPLVWVLWTVISRGIAPILTADWWSTSQAGVMLMLPGGGAAHAMIGTFMQAVVTSVI 103

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+      A      +   RLG +   ++DI+  +P +    F    ++ L+     G  
Sbjct: 104 SIPIGIFTAIYLVEYSNGNRLGRLTTFMVDILTGVPSIVAALFVYSLWIVLFGFDRSGFA 163

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           ++    I    V  +  +  + L  +P+DL E S +  +  W+    + +P ++ G+V  
Sbjct: 164 VSLSLVILMVPV--IIRNTEEMLRVVPQDLREASYALGVPKWKTIAKIVLPTALSGIVTG 221

Query: 196 MMMSMS 201
           +M++++
Sbjct: 222 VMLAVA 227



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 60/194 (30%), Gaps = 19/194 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF----------R 389
            + ++      +     + + W  I   +      D       G + M            
Sbjct: 33  AATVIIYGAMLIAAVPLVWVLWTVISRGIAPILTADWWSTSQAGVMLMLPGGGAAHAMIG 92

Query: 390 VVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSC 440
             +  ++ S+I IP+GI+             +         +L   P+     F   +  
Sbjct: 93  TFMQAVVTSVISIPIGIFTAIYLVEYSNGNRLGRLTTFMVDILTGVPSIVAALFVYSLWI 152

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V +        +SL ++      I+ N        P D +E + +  +  W+    I+LP
Sbjct: 153 VLFGFDRSGFAVSLSLVILMVPVIIRNTEEMLRVVPQDLREASYALGVPKWKTIAKIVLP 212

Query: 501 GIFPYYVTGAITAC 514
                 VTG + A 
Sbjct: 213 TALSGIVTGVMLAV 226


>gi|116617707|ref|YP_818078.1| ABC-type phosphate transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096554|gb|ABJ61705.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 294

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 14/186 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +LAF+LV G+ ++  H +       +    + I L           +   ++ AM+I
Sbjct: 25  LFAMLAFILVQGVPHLSWHFLTSPARAFEAGGGIGIQL---------FNSFYLLILAMLI 75

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S       A      A+      ++   ++I+ S+P +    F  + F+  +  K+  + 
Sbjct: 76  SFPIALGAAIYLNEYAQKNHFTAIIRTAIEILSSLPSVVVGLFGFLLFVVQF--KLGFSI 133

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+   A+    +  +T S+  SL  IP    E   +  LS W+   ++ +P ++P +V  
Sbjct: 134 LSGAIALTLFNLPLLTRSIETSLAQIPDLQREAGAALGLSRWETVLHVILPAAVPSIVTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 VVLSAG 199



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      +V  +   +    +   V H ++                 I +F    
Sbjct: 8   KIATGVIYAISGIVALILFAMLAFILVQGVPHLSWHFLTSPARAFEAGGGIGIQLFNSFY 67

Query: 393 LIIIASIIWIP--VGIWIGFRP-----HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           L+I+A +I  P  +G  I         H ++ I+   ++L++ P+     +VV    +  
Sbjct: 68  LLILAMLISFPIALGAAIYLNEYAQKNHFTAIIRTAIEILSSLPS-----VVVGLFGFLL 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYII 498
                 L   ++ G     LFN+     +            +E  ++  ++ W    ++I
Sbjct: 123 FVVQFKLGFSILSGAIALTLFNLPLLTRSIETSLAQIPDLQREAGAALGLSRWETVLHVI 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
           LP   P  VTG + + G  + 
Sbjct: 183 LPAAVPSIVTGVVLSAGRVFG 203


>gi|218673762|ref|ZP_03523431.1| phosphate ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 439

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   L      +   ML  + +SL      +      A   +L  ++   ++ + ++P +
Sbjct: 213 EAAGLGVALVGSFYLMLIVLALSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSI 272

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            +    +  F+N + G    A L     +    +  +  +   +L  +P  +   +    
Sbjct: 273 VYGLLGLSVFIN-FIGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLG 331

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 332 ASKMQMVFHHVLPLAMPGILTGTIIGLAHA 361



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 73/188 (38%), Gaps = 6/188 (3%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
            N++V+     +   +    A+   + +  ++  + +  +   +      + + +++++ 
Sbjct: 174 KNRKVNDKQVTWMNQLKASGALHKQFNTGLFVKGNSSRPEAAGLGVALVGSFYLMLIVLA 233

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP---N 449
           ++  I +   I++     +  ++  I+     LAA P+ V+  L +S    +   P   +
Sbjct: 234 LSLPIGVAASIYLEEFAPKNKLTDLIEVNINNLAAVPSIVYGLLGLSVFINFIGLPRSAS 293

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   A P   +  A     +  +   + +LP   P  +TG
Sbjct: 294 LVGGLVLTLMTLPTIIIATRAALRAVPPSIRAAALGLGASKMQMVFHHVLPLAMPGILTG 353

Query: 510 AITACGGA 517
            I     A
Sbjct: 354 TIIGLAHA 361


>gi|326204679|ref|ZP_08194535.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           papyrosolvens DSM 2782]
 gi|325985246|gb|EGD46086.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           papyrosolvens DSM 2782]
          Length = 310

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTF 118
            +  L   ++S + +     L A       ++R+  ++ PIL+++  IP + F    LT 
Sbjct: 87  VMGTLIITLVSAVISIPIGLLTAIYLSEYANKRVRKIIKPILEVLAGIPSIVFGYFALTV 146

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                    P   I   L+A  A+    +  ++     +L  +P  L + + +   +  +
Sbjct: 147 ITPLIKTFLPQTEIFNALSASIAVGIMTIPLVSSLSEDALRAVPDSLRQGALALGSTKME 206

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
               + VP ++ G+  + ++++S  
Sbjct: 207 TSLKVVVPAAISGISASFVLAISRA 231



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 56/159 (35%), Gaps = 14/159 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ +++++I IP+G+             +   I+P  ++LA  P+ VF    ++ ++  
Sbjct: 91  LIITLVSAVISIPIGLLTAIYLSEYANKRVRKIIKPILEVLAGIPSIVFGYFALTVITPL 150

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRY 496
                    +         +    I            A P+  ++ A +   T       
Sbjct: 151 IKTFLPQTEIFNALSASIAVGIMTIPLVSSLSEDALRAVPDSLRQGALALGSTKMETSLK 210

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           +++P          + A   A   +++  +A+    +L 
Sbjct: 211 VVVPAAISGISASFVLAISRAIGETMIVTIAAGARPNLT 249


>gi|296119504|ref|ZP_06838062.1| molybdate ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967387|gb|EFG80654.1| molybdate ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 632

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 18/259 (6%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVL 393
              Q+V  +        +  + + +   ++      F T       + L   T+      
Sbjct: 7   AVRQKVPVLFVAIGIVAIAYIGLPVIALALRVPWAEFATIATDPSTVELLKTTLAAAAWS 66

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV-------------FFPLVVSC 440
            +IA+++   + +W+      +S ++    L  A P  V              F  V+  
Sbjct: 67  TVIATVLGTALALWLSQLRRGASAVRLLVYLPLAMPPVVSGLALTALIGRRGLFAPVLDF 126

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           + +        +    +F T  +++  V +      ++    A    I  W     I LP
Sbjct: 127 LGWGFAFAFPGVVAAHVFVTLPFVVVAVDSALRQIDSEITASARGVGIGQWTILGRITLP 186

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG-LGAYI---AESTEKGSFPEVV 556
            I P  VTG   A   +      +   +     +  T  LG Y+     +    +   ++
Sbjct: 187 TIAPAIVTGLGLAFARSLGEFGTTITFAGSMPGVTRTLPLGIYLEREVSADNAYALSAIL 246

Query: 557 LGVLIMCCFVLALNRFLWH 575
           +G+ ++   V  +  F   
Sbjct: 247 IGIAVLSLIVAGIPMFFGR 265



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 88/261 (33%), Gaps = 28/261 (10%)

Query: 22  LLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS-AMVI 78
           +    + IGI+ I   G+      +     +   I  D  ++     +TTL   + + VI
Sbjct: 12  VPVLFVAIGIVAIAYIGLPVIALALRVPWAEFATIATDPSTV--ELLKTTLAAAAWSTVI 69

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-------------GFLTFTVVYFMN 125
           + +     A   ++ RR    +  ++ +  ++P +             G     + +   
Sbjct: 70  ATVLGTALALWLSQLRRGASAVRLLVYLPLAMPPVVSGLALTALIGRRGLFAPVLDFLGW 129

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +     G   A +F      V     ++  +L  I  ++   +R   +  W     + +
Sbjct: 130 GFAFAFPGVVAAHVFVTLPFVV----VAVDSALRQIDSEITASARGVGIGQWTILGRITL 185

Query: 186 PFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240
           P   P +V  + ++   S G F    +    +      LP +G Y+     A     L A
Sbjct: 186 PTIAPAIVTGLGLAFARSLGEFGTTITFAGSMPGVTRTLP-LGIYLEREVSADNAYALSA 244

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
           IL  +  +  ++        R
Sbjct: 245 ILIGIAVLSLIVAGIPMFFGR 265


>gi|240168516|ref|ZP_04747175.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
           transport integral membrane protein ABC transporter ProW
           [Mycobacterium kansasii ATCC 12478]
          Length = 226

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 12/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  ++I +            +  L  +      I+ +IP L          + L     I
Sbjct: 23  LIPVLIGMAIAVPLGLAVQHAPVLRRLTTAAASIVFTIPSLALFVA-----LPLIIKTRI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             E   I A+       +  ++ ++L  +P  + + + +   S  ++   + +P S+P L
Sbjct: 78  LDEANVIVALTAYTTALLVRTVLEALDAVPAPVRDAAVAVGYSPIRRMIKVELPLSIPVL 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V  + +        VV +  +V   +VI + G+G++     +      I+  ++ M  + 
Sbjct: 138 VAGLRV-------VVVTNIAMVSVGSVIGIGGLGTWFTAGYQTDKSDQIVAGIIAMFALA 190

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 191 VVIDMLL 197



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 13/210 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           + Y++ H     VL VI L        ++ ++I   I +P+G+ +   P +       A 
Sbjct: 1   MRYLLTHLDTAWVLTVIHLRLS-----LIPVLIGMAIAVPLGLAVQHAPVLRRLTTAAAS 55

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           ++   P+   F + +  +    +     + + +   T   ++  V+    A P   ++ A
Sbjct: 56  IVFTIPSLALF-VALPLIIKTRILDEANVIVALTAYTTALLVRTVLEALDAVPAPVRDAA 114

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            +   +  R    + LP   P  V G             V  V   G       GLG + 
Sbjct: 115 VAVGYSPIRRMIKVELPLSIPVLVAGLRVVVVTNIAMVSVGSVIGIG-------GLGTWF 167

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
               +     ++V G++ M    + ++  L
Sbjct: 168 TAGYQTDKSDQIVAGIIAMFALAVVIDMLL 197


>gi|145296568|ref|YP_001139389.1| hypothetical protein cgR_2476 [Corynebacterium glutamicum R]
 gi|140846488|dbj|BAF55487.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 307

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 8/186 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVP---ITLDVHSLPQYASRTTLRMLSAMVI 78
           + A  LV  +  ++  GI                 + L           T ++ +   VI
Sbjct: 44  IAAVPLVWVLWTVISRGIAPILTADWWSTSQAGVMLMLPGGGAAHAMIGTFMQAVVTSVI 103

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+      A      +   RLG +   ++DI+  +P +    F    ++ L+     G  
Sbjct: 104 SIPIGIFTAIYLVEYSNGNRLGRLTTFMVDILTGVPSIVAALFVYSLWIVLFGFDRSGFA 163

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           ++    I    V  +  +  + L  +P+DL E S +  +  W+    + +P ++ G+V  
Sbjct: 164 VSLSLVILMVPV--IIRNTEEMLRVVPQDLREASYALGVPKWKTIAKIVLPTALSGIVTG 221

Query: 196 MMMSMS 201
           +M++++
Sbjct: 222 VMLAVA 227



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 79/261 (30%), Gaps = 30/261 (11%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF----------R 389
           V+  +      +     + + W  I   +      D       G + M            
Sbjct: 33  VATFIIYGAMLIAAVPLVWVLWTVISRGIAPILTADWWSTSQAGVMLMLPGGGAAHAMIG 92

Query: 390 VVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSC 440
             +  ++ S+I IP+GI+             +         +L   P+     F   +  
Sbjct: 93  TFMQAVVTSVISIPIGIFTAIYLVEYSNGNRLGRLTTFMVDILTGVPSIVAALFVYSLWI 152

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V +        +SL ++      I+ N        P D +E + +  +  W+    I+LP
Sbjct: 153 VLFGFDRSGFAVSLSLVILMVPVIIRNTEEMLRVVPQDLREASYALGVPKWKTIAKIVLP 212

Query: 501 GIFPYYVTGAITACGGAWNASIV-------SEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
                 VTG + A       S         S+  +W         L   + +  + G+ P
Sbjct: 213 TALSGIVTGVMLAVARVMGESAPVLVLVGSSQAINWNPFSGPQASLPLMMLDMYKAGTAP 272

Query: 554 ----EVVLGVLIMCCFVLALN 570
               ++    L +   +  LN
Sbjct: 273 ATLDKLWGAALTLVLIIAVLN 293


>gi|331086367|ref|ZP_08335447.1| molybdate ABC transporter [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406133|gb|EGG85656.1| molybdate ABC transporter [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 234

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 24/208 (11%)

Query: 77  VISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--------- 126
           V++ + +F     AA KS + G  L  +LD + ++P++  L  TV  F  L         
Sbjct: 24  VVATVISFFLGIYAARKSVQAGPRLKAVLDGILTLPMV--LPPTVAGFFLLLIFSVRRPF 81

Query: 127 -------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
                  +  KV+ +    + A        M  +   +   I  +L   +R+  +S ++ 
Sbjct: 82  GAFLYGNFDIKVVQSWAGCVIAATVIAFPLMYRNARAAFEQIDINLIHAARTLGMSEFRI 141

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-L 238
           FW + +P + PG+    +++ +       A+ M+  G+       I   IA+ I++ D L
Sbjct: 142 FWTVVMPTAGPGVTAGTILAFARALGEYGATSMLA-GNIPGKTGTISQKIAMVIQDGDYL 200

Query: 239 LAILYAMLTML---GVIFLYDQLLFRPM 263
            A ++  + M+   G+IF+ + LL R M
Sbjct: 201 TAGVWVGIVMVIAFGMIFVLNLLLGRRM 228



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 11/222 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK-IQ 419
           W  +   +       V+            V     + +++   + + +   P ++   + 
Sbjct: 13  WSPLWISMKTGVVATVISFFLGIYAARKSVQAGPRLKAVLDGILTLPMVLPPTVAGFFLL 72

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               +   F A ++    +  V  +         +         +  N  A       + 
Sbjct: 73  LIFSVRRPFGAFLYGNFDIKVVQSWA-----GCVIAATVIAFPLMYRNARAAFEQIDINL 127

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A +  ++ +R +  +++P   P    G I A   A      + + + G+I  +T  +
Sbjct: 128 IHAARTLGMSEFRIFWTVVMPTAGPGVTAGTILAFARALGEYGATSMLA-GNIPGKTGTI 186

Query: 540 GAYIAESTEKGSF--PEVVLGVLIMCCFV--LALNRFLWHPL 577
              IA   + G +    V +G++++  F     LN  L   +
Sbjct: 187 SQKIAMVIQDGDYLTAGVWVGIVMVIAFGMIFVLNLLLGRRM 228


>gi|312978120|ref|ZP_07789865.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus CTV-05]
 gi|310895095|gb|EFQ44164.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           crispatus CTV-05]
          Length = 302

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 7/166 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Y   +    L A+VI L F    A        +       P  +I  SIP + +  F + 
Sbjct: 79  YIVGSLETCLLALVICLPFAIGSAVYMTEISPKIGEKYFRPATEIYVSIPSVVYGWFGMT 138

Query: 122 YFMNLY-----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             + L      P     + LAA   +       +T     ++ ++P    E +     + 
Sbjct: 139 KLVPLIKNIFHPAMGGYSVLAASIVLAIMIFPTITAVSADAIKSVPMSYREGAYGLGATR 198

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           WQ    + +P +  G++  +++ ++      +A  M++        
Sbjct: 199 WQVIGKVVLPAASGGILTGVILGLARAIGEALAVAMVIGKTRSFAA 244



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 60/187 (32%), Gaps = 11/187 (5%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHI-SSKIQPF 421
              +     +   +        ++   ++ ++I     I   +++    P I     +P 
Sbjct: 61  WAPLDKTGLFGGKVGAAVYIVGSLETCLLALVICLPFAIGSAVYMTEISPKIGEKYFRPA 120

Query: 422 AQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGA 472
            ++  + P+ V+         PL+ +         ++  + +++    +  +  V     
Sbjct: 121 TEIYVSIPSVVYGWFGMTKLVPLIKNIFHPAMGGYSVLAASIVLAIMIFPTITAVSADAI 180

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
            + P  ++E A     T W+    ++LP      +TG I     A   ++   +      
Sbjct: 181 KSVPMSYREGAYGLGATRWQVIGKVVLPAASGGILTGVILGLARAIGEALAVAMVIGKTR 240

Query: 533 HLRTTGL 539
                 L
Sbjct: 241 SFAANLL 247


>gi|294791228|ref|ZP_06756385.1| sugar ABC transporter, permease protein [Scardovia inopinata F0304]
 gi|294457699|gb|EFG26053.1| sugar ABC transporter, permease protein [Scardovia inopinata F0304]
          Length = 287

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 13/249 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLD-------VHSLPQYASRTTLRMLSAMVI 78
             ++ +IN+  +    T  P  +V     T D         +  Q    + +  +SA V+
Sbjct: 32  PFLLVVINVFKNMSDITASPLSLVGKHGFTFDNFTNAMQAMNFWQVFGNSVIITVSATVL 91

Query: 79  SLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++LF+ + A + A++       VL  +L     IP    +   V  F  ++   V+   +
Sbjct: 92  TVLFSAMAAYVMARNPTWLANRVLFALLVASMVIPFQVLMVPLVSVFGGIF--GVLNHRI 149

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCN-IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             I       V   TF  + ++   IP +LEE +     + W+ FW + +P   P +   
Sbjct: 150 TLILMHVGFSVALATFMFHGAIRTTIPAELEEAAEIDGCNKWRTFWTIVLPLMKPMIATV 209

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            ++     W   +   +++    +  +P I + +       D   ++ A+L  +  I + 
Sbjct: 210 TVIDAMAFWNDYLLPSLVLGRTDLYTIP-IATQMFYGTYSTDTGLVMAALLLAMLPILIL 268

Query: 256 DQLLFRPMI 264
              L R ++
Sbjct: 269 YLFLQRFIV 277


>gi|258621617|ref|ZP_05716649.1| ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258624369|ref|ZP_05719317.1| ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262165154|ref|ZP_06032891.1| methionine ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262172082|ref|ZP_06039760.1| methionine ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|258583331|gb|EEW08132.1| ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258586089|gb|EEW10806.1| ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261893158|gb|EEY39144.1| methionine ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|262024870|gb|EEY43538.1| methionine ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 225

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           + L+   L     +T   +  A V+          +   +++        L  VL  I++
Sbjct: 10  VALNSDLLLTATWQTLYMVAIAGVVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 59/191 (30%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  ++   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGVVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAIVNIGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +          I     +     +
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITIM 197

Query: 556 VLGVLIMCCFV 566
            + V+++   V
Sbjct: 198 AVTVVMLIVLV 208


>gi|302535205|ref|ZP_07287547.1| ABC transporter permease [Streptomyces sp. C]
 gi|302444100|gb|EFL15916.1| ABC transporter permease [Streptomyces sp. C]
          Length = 221

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 9/152 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           PVG+W+G      +     +    A P      L +  VS       L     ++     
Sbjct: 47  PVGLWLGHLGKGGTLAVNVSNAGRAVPVFAV--LALFMVSPLRSAGYLPTIAALVLFAVP 104

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +L N   G         E A    ++G + +  + LP   P  +TG  +A       + 
Sbjct: 105 PLLTNAYVGMREVDRSVVEAARGMGMSGRQLFLRVELPLARPLVMTGLRSAAVQVVATAT 164

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           ++ +   G       GLG  I       + P+
Sbjct: 165 IAAMVGQG-------GLGRIITAGFNTYNTPQ 189



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 13/155 (8%)

Query: 85  VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144
                     + G + V + +  +++P+   L   +V              L  I A+  
Sbjct: 47  PVGLWLGHLGKGGTLAVNVSNAGRAVPVFAVLALFMV------SPLRSAGYLPTIAALVL 100

Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204
             V  +  + Y  +  + R + E +R   +SG Q F  + +P + P ++  +  +     
Sbjct: 101 FAVPPLLTNAYVGMREVDRSVVEAARGMGMSGRQLFLRVELPLARPLVMTGLRSAAVQVV 160

Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
                + M+  G       G+G  I       +  
Sbjct: 161 ATATIAAMVGQG-------GLGRIITAGFNTYNTP 188


>gi|197334989|ref|YP_002155447.1| D-methionine transport system permease protein MetI [Vibrio
           fischeri MJ11]
 gi|197316479|gb|ACH65926.1| D-methionine transport system permease protein MetI [Vibrio
           fischeri MJ11]
          Length = 225

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           + L+   L      T   +  A ++          +   +++           VL  I++
Sbjct: 10  LDLNSKLLLNATGETLYMVAVAGIVGFAIGIPLGVVLHITKKGGLMENTAFNSVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  VGRSVPFLVLM-VAIIPVTKLIVGSFIGTT-AAIVPLTIGAIPFVARLIEGALIEVPSGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIITKVLLPEALPTILNSVTITL 162



 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 30/199 (15%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V  I+   I IP+G+ +      G       +S +     +  +       P +
Sbjct: 24  TLYMVAVAGIVGFAIGIPLGVVLHITKKGGLMENTAFNSVLGAIVNVGRSV------PFL 77

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS--------AFPNDFKEVASSFHIT 489
           V  V+   +   +  S +        +    I   +          P+   E A S   T
Sbjct: 78  VLMVAIIPVTKLIVGSFIGTTAAIVPLTIGAIPFVARLIEGALIEVPSGLVEAAQSMGAT 137

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    ++LP   P  +           + S ++     G +       G +       
Sbjct: 138 PLQIITKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH------- 190

Query: 550 GSFPEVVLGVLIMCCFVLA 568
             +   ++ V ++   VL 
Sbjct: 191 -RYDLTIMAVTVVMLIVLV 208


>gi|38232726|ref|NP_938493.1| choline transport system permease protein [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38198984|emb|CAE48601.1| choline transport system permease protein [Corynebacterium
           diphtheriae]
          Length = 213

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 83/188 (44%), Gaps = 12/188 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L  + A+VIS+L        AA+  R+G  +V +  +  +IP L  L   +V F+   P
Sbjct: 18  VLLSVPAIVISVLVAVPVGLFAARHPRVGNTVVQVTSLAYTIPALPML--VIVPFIVAVP 75

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              + +++  I A+    +  +  +   +  ++P ++   + +  +S  Q  W + +P +
Sbjct: 76  ---LRSQINVIIALCVYGIALIVRTATDAFRSVPEEVRTAAVAQGMSPSQIAWKVDMPLA 132

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +P L+  + +         V++  +V    +I +  +GS      +      ++  ++ +
Sbjct: 133 IPVLISGLRV-------LCVSTVGLVTIGALIGVSSLGSLFTDGFQRNITAEVVVGIVAV 185

Query: 249 LGVIFLYD 256
           + +  L+D
Sbjct: 186 VLLAVLFD 193



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 73/204 (35%), Gaps = 10/204 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              V+ L    +   V  I+I+ ++ +PVG++    P + + +     L    PA     
Sbjct: 7   WPEVLDLLRAHVLLSVPAIVISVLVAVPVGLFAARHPRVGNTVVQVTSLAYTIPALPML- 65

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           ++V  +    L   + + + +       I+        + P + +  A +  ++  +   
Sbjct: 66  VIVPFIVAVPLRSQINVIIALCVYGIALIVRTATDAFRSVPEEVRTAAVAQGMSPSQIAW 125

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + +P   P  ++G    C        +  +          + LG+   +  ++    EV
Sbjct: 126 KVDMPLAIPVLISGLRVLCVSTVGLVTIGALIG-------VSSLGSLFTDGFQRNITAEV 178

Query: 556 VLGVLIMCCFVLALNR--FLWHPL 577
           V+G++ +    +  +    +   L
Sbjct: 179 VVGIVAVVLLAVLFDVACLILQRL 202


>gi|288916584|ref|ZP_06410960.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
 gi|288352015|gb|EFC86216.1| binding-protein-dependent transport systems inner membrane
           component [Frankia sp. EUN1f]
          Length = 325

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 16/173 (9%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               +S   + ++  L A P     PL          +       ++  GT   +L   +
Sbjct: 153 RSKLLSELARAYSAALLALPVVAVIPLSNVFFGLQPAS----RVFVVAVGTTPIMLTYTL 208

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            G  A      E+  +  +  WR    + LP   PY+++G   A   A++ +I+ E    
Sbjct: 209 TGLKATDAGLAEMFRACAMPRWRSVLSLFLPSALPYFISGVRVALPSAFSVAIIGEYFGG 268

Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL-------NRFLWH 575
                    LG YI  +  +    ++    +    F +AL       +R L  
Sbjct: 269 ERNT-----LGTYIKTAAVQSKVADLWGAAMTAFLFAVALFALVALADRLLLR 316



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 81/243 (33%), Gaps = 20/243 (8%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +LV+  + I    ++   + +                +Y   T    +  +   +     
Sbjct: 87  LLVLWELAIEAFDVRPFVLAKPSAIWDAFAEKPDVYIEYGFNTLREAVQGLAFGVAVGVA 146

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A    +S+ L  +       + ++P++  +  + V+F             + +F +   
Sbjct: 147 VAVATFRSKLLSELARAYSAALLALPVVAVIPLSNVFFGL--------QPASRVFVVAVG 198

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
               M       L      L E+ R+  +  W+    L +P ++P  +  + +++   + 
Sbjct: 199 TTPIMLTYTLTGLKATDAGLAEMFRACAMPRWRSVLSLFLPSALPYFISGVRVALPSAFS 258

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA-------MLTMLGVIFLYDQL 258
             +  E             +G+YI  A  +  +  +  A        + +  ++ L D+L
Sbjct: 259 VAIIGEYFGGERNT-----LGTYIKTAAVQSKVADLWGAAMTAFLFAVALFALVALADRL 313

Query: 259 LFR 261
           L R
Sbjct: 314 LLR 316


>gi|227503840|ref|ZP_03933889.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium striatum ATCC 6940]
 gi|227199664|gb|EEI79712.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium striatum ATCC 6940]
          Length = 561

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 96/269 (35%), Gaps = 40/269 (14%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIA-------WQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +  R  +   I     V  VAI +        W  +G +V   +  D+L V      T+ 
Sbjct: 6   TPTRAPWPFAIVGAVAVLYVAIPVVALATRVPWSRLGAVVGQDSTHDLLRV------TLS 59

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             V+  ++A+ + + + +W+    H+   ++    L          P+V        L  
Sbjct: 60  SAVLATVLATFLGVGLAMWLHGLKHMGQAVRLLVYL-----PLAMPPVVGGLALSAALGR 114

Query: 449 NLWLSLLM------------------IFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
              L+ L+                   F    +++  V +       +    A    ++ 
Sbjct: 115 RGLLAPLLDALHLKFAFAFAGVVTAHTFVALPFVVVAVDSALRHIDQEVSTSARRVGMSR 174

Query: 491 WRWWRYIILPGIFPYYVTGAITACG---GAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           W  W+ I LP I P   TGA+ AC    G +  +I    ++ G     ++G+      ST
Sbjct: 175 WAVWQKITLPTIAPSIFTGAVLACARSLGEFGTTITFAGSAPGITRTMSSGIYLEREVST 234

Query: 548 EKG-SFPEVVLGVLIMCCFVLALNRFLWH 575
           +   +   V++G+ ++C  +  L   L  
Sbjct: 235 DNAYALSAVLIGLAVLCLALAGLPTLLRK 263



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 78/259 (30%), Gaps = 31/259 (11%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            +       V  +   +      T VP   +  V      H L +    +    + A V+
Sbjct: 11  PWPFAIVGAVAVLYVAIPVVALATRVPWSRLGAVVGQDSTHDLLRVTLSSA---VLATVL 67

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-------------GFLTFTVVYFMN 125
           +       A      + +G  +  ++ +  ++P +             G L   +     
Sbjct: 68  ATFLGVGLAMWLHGLKHMGQAVRLLVYLPLAMPPVVGGLALSAALGRRGLLAPLLDALHL 127

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +     G   A  F      V     ++  +L +I +++   +R   +S W  +  + +
Sbjct: 128 KFAFAFAGVVTAHTFVALPFVV----VAVDSALRHIDQEVSTSARRVGMSRWAVWQKITL 183

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI------GSYIALAIKEQDLL 239
           P   P +    +++ +         E           PGI      G Y+   +   +  
Sbjct: 184 PTIAPSIFTGAVLACARSL-----GEFGTTITFAGSAPGITRTMSSGIYLEREVSTDNAY 238

Query: 240 AILYAMLTMLGVIFLYDQL 258
           A+   ++ +  +      L
Sbjct: 239 ALSAVLIGLAVLCLALAGL 257


>gi|159905952|ref|YP_001549614.1| phosphate ABC transporter inner membrane subunit PstA
           [Methanococcus maripaludis C6]
 gi|159887445|gb|ABX02382.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanococcus maripaludis C6]
          Length = 288

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 94/271 (34%), Gaps = 29/271 (10%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
               ++G + I   G           + + + L           + +  L+ +V+S+LF+
Sbjct: 28  ILFTIVGYVFINGIGAINMEFFFGDANPINVILGSERCFDGIWNSMVGTLALVVLSILFS 87

Query: 84  FVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
             +  L A           +   +    D +  +P + F  F     +      ++   L
Sbjct: 88  IPFGVLGAIYLHEYASDNTITRAIRFSSDSLAGLPSIVFGIFGYALAIKTVGPSLLIGGL 147

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
              F +       +  +  + L  +   L E S +   + WQ    + VP ++P ++  +
Sbjct: 148 TLSFMVLPI----IMRATEEGLKAVAPGLREGSLALGATKWQTITKVVVPSALPQMITGI 203

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIG------------SYIALAIKEQDLLAILYA 244
           +++M        A+ M           GIG              +A      + L++ Y 
Sbjct: 204 ILAMGRS-AEETAAIMFTAATAF--SFGIGLFNRVETLSFSLYVLATEYSTAEELSVAYG 260

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275
           +  +L VI     +LF    V  N+F+L ++
Sbjct: 261 IALVLIVIM---FILFTIANVVKNRFKLMQS 288



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 12/165 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVV 438
           +M   + L++++ +  IP G+              I+  I+  +  LA  P+ V F +  
Sbjct: 72  SMVGTLALVVLSILFSIPFGVLGAIYLHEYASDNTITRAIRFSSDSLAGLPSIV-FGIFG 130

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             ++   + P+L +  L +      I+      G  A     +E + +   T W+    +
Sbjct: 131 YALAIKTVGPSLLIGGLTLSFMVLPIIMRATEEGLKAVAPGLREGSLALGATKWQTITKV 190

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           ++P   P  +TG I A G    ++  +    +      + G+G +
Sbjct: 191 VVPSALPQMITGIILAMG---RSAEETAAIMFTAATAFSFGIGLF 232


>gi|148379471|ref|YP_001254012.1| methionine ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932335|ref|YP_001383848.1| methionine ABC transporter permease [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935344|ref|YP_001387398.1| methionine ABC transporter permease [Clostridium botulinum A str.
           Hall]
 gi|153939971|ref|YP_001390845.1| methionine ABC transporter permease [Clostridium botulinum F str.
           Langeland]
 gi|168180157|ref|ZP_02614821.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum NCTC 2916]
 gi|170756213|ref|YP_001781135.1| methionine ABC transporter permease [Clostridium botulinum B1 str.
           Okra]
 gi|226948834|ref|YP_002803925.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|148288955|emb|CAL83042.1| D-methionine ABC transporter, permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928379|gb|ABS33879.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|152931258|gb|ABS36757.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum A str. Hall]
 gi|152935867|gb|ABS41365.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum F str. Langeland]
 gi|169121425|gb|ACA45261.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum B1 str. Okra]
 gi|182668931|gb|EDT80907.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum NCTC 2916]
 gi|226843252|gb|ACO85918.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|295318914|gb|ADF99291.1| methionine ABC transporter, MUT family, permease protein
           [Clostridium botulinum F str. 230613]
          Length = 218

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTF 118
           +T   ++ + ++S +  F+ A + A         ++ +  +L  I+++++S+P    L  
Sbjct: 18  QTIYMIIISTILSFVIGFILAIVLAVTDERGIKPNKIIYGILSTIINVLRSVP-FIILAV 76

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F     G  IG E AAI  +  +    +   +  SL  +   L E ++SF  S  Q
Sbjct: 77  AIIPFTRSIVGTSIG-ENAAIVPLTIASAPFIARLIESSLKEVNPSLIEAAKSFGASNIQ 135

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
             + + V  ++P +  ++ ++
Sbjct: 136 IIFKVMVKEAIPSINLDLTLA 156



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 6/149 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +    +           +  +   T+   V+  I+A ++ +     I     I   +   
Sbjct: 3   EITTLMKQIILPSLWQTIYMIIISTILSFVIGFILAIVLAVTDERGIKPNKIIYGILSTI 62

Query: 422 AQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             +L + P    A    P     +    +  N  +  L I    + I   + +       
Sbjct: 63  INVLRSVPFIILAVAIIPF-TRSIVGTSIGENAAIVPLTIASAPF-IARLIESSLKEVNP 120

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYY 506
              E A SF  +  +    +++    P  
Sbjct: 121 SLIEAAKSFGASNIQIIFKVMVKEAIPSI 149


>gi|103486314|ref|YP_615875.1| phosphate ABC transporter permease [Sphingopyxis alaskensis RB2256]
 gi|98976391|gb|ABF52542.1| Phosphate transport system permease protein 2 [Sphingopyxis
           alaskensis RB2256]
          Length = 418

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 59/139 (42%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  + I+ L  F    LAA        K+R   ++ V I + + ++P + F    +  F+
Sbjct: 204 VLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEVSI-NNLAAVPSIIFGLLALAVFI 262

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    + L     +    +  +  +   ++ ++P  + + +     S  Q  ++  
Sbjct: 263 NWF-GICQASPLVGGLTLALMTMPVIVIASRNAIKSVPPSIRDAALGVGASPVQVVFHHV 321

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++ M+  
Sbjct: 322 LPLALPGILTGTIIGMARA 340



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 23/204 (11%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FPLVVS 439
           V+ I IA +I  P G+               +  I+     LAA P+ +F      + ++
Sbjct: 204 VLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEVSINNLAAVPSIIFGLLALAVFIN 263

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                  +P +    L +  T   I+        + P   ++ A     +  +   + +L
Sbjct: 264 WFGICQASPLVGGLTLALM-TMPVIVIASRNAIKSVPPSIRDAALGVGASPVQVVFHHVL 322

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG----------LGAYIA-ESTE 548
           P   P  +TG I     A   +    +           G          +  ++  +  +
Sbjct: 323 PLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVPGGICSPSTVLPMQIFLWSDEVD 382

Query: 549 KGSFPEVVLGVLIMCCFVLALNRF 572
           +G   +    ++++   +L++N F
Sbjct: 383 RGFVEKTSAAIIVLLIVLLSMNAF 406


>gi|284048517|ref|YP_003398856.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
 gi|283952738|gb|ADB47541.1| binding-protein-dependent transport systems inner membrane
           component [Acidaminococcus fermentans DSM 20731]
          Length = 220

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T   +  +  I+ LF      +          ++  L   L  I++ ++S+P 
Sbjct: 9   LIKALGETLYMVALSAAIASLFGIPLGVILTITGKGHIKENAALHKTLGSIVNALRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++    +  G  IG   AAI  +  S    ++  +  SL  +   + E ++S 
Sbjct: 68  FIILMVAIIPLTRIIVGSSIGTT-AAIVPLTISCTPFISRIIESSLLEVDPGVIEAAQSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q  W + +P +M  +V  + +++
Sbjct: 127 GASPLQIIWKVLLPEAMHSIVLGITLAV 154



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 12/193 (6%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA 430
           +I     T++ V +   IAS+  IP+G+         I     +   +      L + P 
Sbjct: 9   LIKALGETLYMVALSAAIASLFGIPLGVILTITGKGHIKENAALHKTLGSIVNALRSVPF 68

Query: 431 NVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +    ++     +    +     +  L I  T + I   + +          E A S  
Sbjct: 69  IILMVAIIPLTRIIVGSSIGTTAAIVPLTISCTPF-ISRIIESSLLEVDPGVIEAAQSMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
            +  +    ++LP      V G   A      +S ++     G +       G    ++ 
Sbjct: 128 ASPLQIIWKVLLPEAMHSIVLGITLAVISLIGSSAMAGALGGGGLGDLAIRYGYQRFQAD 187

Query: 548 EKGSFPEVVLGVL 560
              +   V++ ++
Sbjct: 188 TMIATVIVLIALV 200


>gi|254469699|ref|ZP_05083104.1| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Pseudovibrio sp. JE062]
 gi|211961534|gb|EEA96729.1| ABC transporter, membrane spanning protein
           (proline/glycine/betaine) [Pseudovibrio sp. JE062]
          Length = 375

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 8/142 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL---TFTVV 121
           A R       ++ ++ +  F    L+ ++  L   ++PIL  +Q+IP L         + 
Sbjct: 165 AGRHLGLAFGSLAVAAVIGFPLGVLSHRNENLRSTVLPILSFLQTIPSLAMFGIMIPILA 224

Query: 122 YFMNLYPGKVIG-----AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           +     PG           L A  A+    +  +  +    L   P    + +R   ++ 
Sbjct: 225 WVGTTIPGARELGVAGIGFLPAFLALVIYSLLPVVANTVVGLEAAPPAAMDAARGMGMTR 284

Query: 177 WQKFWYLGVPFSMPGLVWNMMM 198
            Q+   + +P  +P ++  + +
Sbjct: 285 NQRLLQVQLPLGLPVMLAGIRI 306



 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 13/183 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN- 449
              + +A++I  P+G+      ++ S + P    L   P+   F +++  +++       
Sbjct: 173 FGSLAVAAVIGFPLGVLSHRNENLRSTVLPILSFLQTIPSLAMFGIMIPILAWVGTTIPG 232

Query: 450 -----------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                      L   L ++  +   ++ N + G  A P    + A    +T  +    + 
Sbjct: 233 ARELGVAGIGFLPAFLALVIYSLLPVVANTVVGLEAAPPAAMDAARGMGMTRNQRLLQVQ 292

Query: 499 LPGIFPYYVTGAITACG-GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           LP   P  + G           A I   +   G       GL     +    G+ P V L
Sbjct: 293 LPLGLPVMLAGIRIVLVQNIGLAVIAGLIGGGGFGTFVFQGLNQTATDLILLGALPTVAL 352

Query: 558 GVL 560
            ++
Sbjct: 353 ALI 355


>gi|297627143|ref|YP_003688906.1| ABC transporter, permease protein [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922908|emb|CBL57490.1| ABC transporter, permease protein [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 386

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 67/186 (36%), Gaps = 6/186 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   + ++ +++++   + +     D          V      A       L    I+ L
Sbjct: 116 LAFLLALVPLVSLIWETVSQGAARFDWQFFTKSMYGVIGDDGGAGHAVQGTLIVTAIATL 175

Query: 82  FTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            +     L A         +L   +  ++D+M  IP +    F    F+ +         
Sbjct: 176 ISVPIGLLTAVYLVEYGRGKLASAITLLVDVMTGIPSIVAGLFAYALFVLVVGVANATMG 235

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +    A+    +  +  S  + L  +P+ L E S +  +  W+    + +P ++ G+V  
Sbjct: 236 ITGAVALCVLMIPYIVRSSEEMLQLVPKSLREASYALGVPKWRTILKVVIPTALSGIVSG 295

Query: 196 MMMSMS 201
           +++ ++
Sbjct: 296 VVLGIA 301



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           FS LS  V  +   L +          +  +  R +  L    F +     + + W+++ 
Sbjct: 75  FSILSWVVISVIAYLALHYVVSRSVEGRRRAFDRFARDLVTLAFLLALVPLVSLIWETVS 134

Query: 366 YIVNHFTYQ-------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RP 412
                F +Q        V+         +   +++  IA++I +P+G+          R 
Sbjct: 135 QGAARFDWQFFTKSMYGVIGDDGGAGHAVQGTLIVTAIATLISVPIGLLTAVYLVEYGRG 194

Query: 413 HISSKIQPFAQLLAAFPA----NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            ++S I     ++   P+       + L V  V   +    +  ++ +      YI+ + 
Sbjct: 195 KLASAITLLVDVMTGIPSIVAGLFAYALFVLVVGVANATMGITGAVALCVLMIPYIVRSS 254

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA----CGGAWNASIVS 524
                  P   +E + +  +  WR    +++P      V+G +       G      I +
Sbjct: 255 EEMLQLVPKSLREASYALGVPKWRTILKVVIPTALSGIVSGVVLGIARVIGETAPLLITA 314

Query: 525 EVASWGH 531
               W +
Sbjct: 315 GFVDWKN 321


>gi|238854588|ref|ZP_04644921.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 269-3]
 gi|260664263|ref|ZP_05865116.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932125|ref|ZP_06337581.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 208-1]
 gi|313472461|ref|ZP_07812953.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 1153]
 gi|238832773|gb|EEQ25077.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 269-3]
 gi|239529884|gb|EEQ68885.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 1153]
 gi|260562149|gb|EEX28118.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           SJ-7A-US]
 gi|281303749|gb|EFA95895.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 208-1]
          Length = 293

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               ++++ ++ +++ G+ + +           + +   +      +   ++  ++IS+ 
Sbjct: 20  FAGILVILFLLYLIVEGLPQLSWHFLTTASDSFSTN-GGIRDQLFNSFYLVVITLIISIP 78

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   A      AK       L   ++++ S+P +    F  + F+  +  K+  + LA 
Sbjct: 79  LSLGAAIYLSEYAKDNVFTRALRLAIEVLSSLPSVVIGLFGYLIFVVNF--KMGFSILAG 136

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A+    +  +T +  Q+L  IP    +      ++ W+    + +P + P ++  +++
Sbjct: 137 ALALTILNIPLLTTNAEQALRQIPYLQRQAGLGLGMTKWRVTKDIVIPAAFPSILTGVIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G + I +
Sbjct: 197 A-SGRIFGEAAALIFTSGQSSIAV 219



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 11/187 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
             IF   +V    + +  + +  +  HF  T  D           +F    L++I  II 
Sbjct: 17  GAIFAGILVILFLLYLIVEGLPQLSWHFLTTASDSFSTNGGIRDQLFNSFYLVVITLIIS 76

Query: 402 IPV--GIWIGFRPHI-----SSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWL 452
           IP+  G  I    +      +  ++   ++L++ P+ V   F  ++  V++      L  
Sbjct: 77  IPLSLGAAIYLSEYAKDNVFTRALRLAIEVLSSLPSVVIGLFGYLIFVVNFKMGFSILAG 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L +       +  N        P   ++      +T WR  + I++P  FP  +TG I 
Sbjct: 137 ALALTILNIPLLTTNAEQALRQIPYLQRQAGLGLGMTKWRVTKDIVIPAAFPSILTGVIL 196

Query: 513 ACGGAWN 519
           A G  + 
Sbjct: 197 ASGRIFG 203


>gi|219854082|ref|YP_002471204.1| hypothetical protein CKR_0739 [Clostridium kluyveri NBRC 12016]
 gi|219567806|dbj|BAH05790.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 229

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 83/217 (38%), Gaps = 17/217 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPILGFL 116
            S T   ++ A  I+LL       +   +R        RL  +L  I++ ++S+P +  L
Sbjct: 20  LSETIEMVIIAGSIALLIGMPLGIILVVTRKGHILENERLNKILATIVNAIRSLPSI-IL 78

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++    L  G  +G + AAI  I       +   +  S+  +     E + S     
Sbjct: 79  IVVLLPLARLIVGTTLGMK-AAIVPISIGISPLLARIIETSIEQVEWGKIEAALSMGAKP 137

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q    + +P ++P L+  + +S+     F   + +I  G       G+GS       ++
Sbjct: 138 FQIISKVLIPEALPSLIKGITISIISIIEFTAIAGVIGAG-------GLGSLAIRFGYQR 190

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
               I+   + +L  +  + Q     +    NK R +
Sbjct: 191 FREDIMIVTVILLIFLVQFIQFSGDRISKHVNKKRYK 227



 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 74/206 (35%), Gaps = 17/206 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAF 428
           ++V+     T+  V++   IA +I +P+GI +             ++  +      + + 
Sbjct: 14  IFVLKGLSETIEMVIIAGSIALLIGMPLGIILVVTRKGHILENERLNKILATIVNAIRSL 73

Query: 429 PANVFFPLVVSCV-SYYHLNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSF 486
           P+ +   +++            +  +++ I      +L  +I            E A S 
Sbjct: 74  PSIILIVVLLPLARLIVGTTLGMKAAIVPISIGISPLLARIIETSIEQVEWGKIEAALSM 133

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               ++    +++P   P  + G   +       + ++ V   G       GLG+     
Sbjct: 134 GAKPFQIISKVLIPEALPSLIKGITISIISIIEFTAIAGVIGAG-------GLGSLAIRF 186

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
             +    ++++  +I+  F++   +F
Sbjct: 187 GYQRFREDIMIVTVILLIFLVQFIQF 212


>gi|182415373|ref|YP_001820439.1| binding-protein-dependent transport systems inner membrane
           component [Opitutus terrae PB90-1]
 gi|177842587|gb|ACB76839.1| binding-protein-dependent transport systems inner membrane
           component [Opitutus terrae PB90-1]
          Length = 263

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 70/181 (38%), Gaps = 8/181 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AFV +   ++  L       +P     +         L +    T    L    +++  
Sbjct: 16  VAFVALWYGVHFWLSEDSRFLLPAPDAVLRAFGEYRTDLVRATLNTVYGALLGFALAIGV 75

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
           + + A + + S  + + L P L ++Q  PI+      +++     P        + +   
Sbjct: 76  SILAAVVLSLSPIVRISLYPYLMLLQMTPIIIAAPILILWVGPGLP--------SVVLIT 127

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
           F    + +  +  Q L +  R+L ++ R +R S +Q+   L +P ++P     + ++ + 
Sbjct: 128 FLICFFPLAVNTTQGLVSTDRNLVDLFRMWRASRFQQLVLLRLPAALPYFFTGLRIAATL 187

Query: 203 G 203
            
Sbjct: 188 A 188



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 68/195 (34%), Gaps = 5/195 (2%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++     T++  ++   +A  + I   + +   P +   + P+  LL   P  +  P+++
Sbjct: 54  LVRATLNTVYGALLGFALAIGVSILAAVVLSLSPIVRISLYPYLMLLQMTPIIIAAPILI 113

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             V     +    + L+      + +  N   G  +   +  ++   +  + ++    + 
Sbjct: 114 LWVGPGLPS----VVLITFLICFFPLAVNTTQGLVSTDRNLVDLFRMWRASRFQQLVLLR 169

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   PY+ TG   A   A   ++V +  +          LG      + +  +  +   
Sbjct: 170 LPAALPYFFTGLRIAATLAPIGALVGDYTAGSSAGDGGG-LGFQALIYSSQAKYAALFAT 228

Query: 559 VLIMCCFVLALNRFL 573
             + C        F+
Sbjct: 229 AAVTCVLGFVFVGFV 243


>gi|119960669|ref|YP_948525.1| ABC-type proline/glycine betaine transport systems, permease
           component [Arthrobacter aurescens TC1]
 gi|119947528|gb|ABM06439.1| ABC-type proline/glycine betaine transport systems, permease
           component [Arthrobacter aurescens TC1]
          Length = 247

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 11/212 (5%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           I  ++I ++ N   +     +       +    ++++IA+ I +P+G++IG         
Sbjct: 3   IFAETIAWLTNPKNWAGSGGIPTRLLEHLQYSGLVLLIAAAIAVPIGLYIGHTGRGRVVA 62

Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              A  L A P      L         + P   L +L    T   +L    AG S+    
Sbjct: 63  VAVAGALRALPTLGLLVLFALLAGSGLMPPVWALVIL----TVPPLLAGTYAGISSVDAT 118

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             + A +  +T  +    + LP        G  TA         V      G       G
Sbjct: 119 VVDAARAMGMTELQILFRVELPNGLQVMFGGIRTAVLQVIATVSVVAYLPLG-------G 171

Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           LG Y+ +      FP ++ G L++    +A++
Sbjct: 172 LGRYLFDGLVLQDFPRMLGGSLLIAGLAIAVD 203



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++A+    V  +    Y  + ++   + + +R+  ++  Q  + + +P  +  +   +  
Sbjct: 93  VWALVILTVPPLLAGTYAGISSVDATVVDAARAMGMTELQILFRVELPNGLQVMFGGIRT 152

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      V+A+  +V     +PL G+G Y+   +  QD   +L   L + G+    D +
Sbjct: 153 AV----LQVIATVSVVA---YLPLGGLGRYLFDGLVLQDFPRMLGGSLLIAGLAIAVDLV 205

Query: 259 L 259
           L
Sbjct: 206 L 206


>gi|13475074|ref|NP_106639.1| ABC transporter, permease [Mesorhizobium loti MAFF303099]
 gi|14025826|dbj|BAB52425.1| ABC transporter, permease [Mesorhizobium loti MAFF303099]
          Length = 592

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 80/530 (15%), Positives = 168/530 (31%), Gaps = 39/530 (7%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           LA +LV+  + I+   +     P   +          +  +   +T    L A  I L+ 
Sbjct: 19  LAILLVVFGVPIVQLFLTSLNAPDLSMVNYRAFFGRSANVRVLYQTIEISLVATAICLII 78

Query: 83  TFVYATLAAK-SRRLGMVLVPILDIMQSIPILG----FLTFT----------VVYFMNLY 127
            +  A L    S+RL M L+ ++ I      L     ++             +   +   
Sbjct: 79  GYPAAYLIVTASKRLRMTLIVLVVIPYLTSGLARTYAWIIILGDGGLINNLLLELGLISS 138

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  +I   +A   A+    +  M   +   +  I R L   +RS     +  FW +  P 
Sbjct: 139 PLPLIYNRMAVYIAMVHIMLPMMILPLVSVMMGIDRSLMAAARSMGAGPFTAFWRVFFPL 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           S+PG+    ++       F +    +      +    I S ++       + A  + +L 
Sbjct: 199 SLPGVRSGSLLVFVICLGFYITPAAVGGLRDAMLSTFIASQVSTGFDMAPIAASSFILLA 258

Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307
           +   +     L                 +G        +   R +    F    S+    
Sbjct: 259 IAVAVLSLLGL---------------DLSGTQGRAVQAVRKSRPSRRPSFGTIKSYLREL 303

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P+S+  K+    L   R     + +       V     +F   VV  ++       + + 
Sbjct: 304 PVSSRAKRWTVQLYQARGDSQWSKIVGPVFVVVVMFYLLFPEAVVIIMSFSAG-SVLEFP 362

Query: 368 VNHFTYQDVLYVI----WLGCI--TMFRVVVLIIIASIIWIPVGIWIGF-RPHISSKIQP 420
            +  + +          W G    ++   V + ++++++       I   RP + S +  
Sbjct: 363 PSGLSLRWYRSFFDDPSWYGAAWTSIQIGVAVAVLSTVVGTLAAYGISRARPQLRSSLTM 422

Query: 421 FAQLLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
                   P  V          +   +     + L    G   Y++  V A  + F    
Sbjct: 423 AILTPITIPVIVVGVATYFGLANLGLIGSKTGIVLAHSIGAIGYVVVIVSATLANFDRTL 482

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           ++ A S      + +  + LP I P  + GA+ A   +++  +V+     
Sbjct: 483 EQAAMSMRAGPLQTFMRVTLPLIRPGIIGGAVFAFIHSFDEVVVTSFVGG 532



 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F   + II     G      P  +      +         A+ T++++  A+    + 
Sbjct: 341 LLFPEAVVIIMSFSAGSVLEFPPSGLSLRWYRSFFDDPSWYGAAWTSIQIGVAVA---VL 397

Query: 83  TFVYATLAAKS-RRLGMVLVPIL--DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           + V  TLAA    R    L   L   I+  I I   +     YF     G +IG++   +
Sbjct: 398 STVVGTLAAYGISRARPQLRSSLTMAILTPITIPVIVVGVATYFGLANLG-LIGSKTGIV 456

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A     +  +   +  +L N  R LE+ + S R    Q F  + +P   PG++   + +
Sbjct: 457 LAHSIGAIGYVVVIVSATLANFDRTLEQAAMSMRAGPLQTFMRVTLPLIRPGIIGGAVFA 516

Query: 200 MSGGWFFVVASEMIVVGDTVIPLP 223
               +  VV +   V G ++  LP
Sbjct: 517 FIHSFDEVVVTS-FVGGFSMYTLP 539


>gi|238754777|ref|ZP_04616128.1| D-methionine transport system permease protein metI [Yersinia
           ruckeri ATCC 29473]
 gi|238706937|gb|EEP99303.1| D-methionine transport system permease protein metI [Yersinia
           ruckeri ATCC 29473]
          Length = 209

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T +    +     +       L         + + +L   L  +++I +SIP    L  
Sbjct: 7   ETIMMTFVSGFFGFVIGLPIGVLLYITRPGQISANNKLYNCLSALVNIFRSIP-FIILLV 65

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   + +Q
Sbjct: 66  WMIPFTRMIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPFQ 124

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGLV    +++
Sbjct: 125 IIKKVLLPEALPGLVNAATITL 146



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +P+G+         I     + + +     +  + P     V+ 
Sbjct: 8   TIMMTFVSGFFGFVIGLPIGVLLYITRPGQISANNKLYNCLSALVNIFRSIPFIILLVWM 67

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E A +   T ++  
Sbjct: 68  IPFTRMIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPSGLVEAARAMGATPFQII 126

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + ++LP   P  V  A          S +      G +       G     +T
Sbjct: 127 KKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 179


>gi|312880965|ref|ZP_07740765.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Aminomonas paucivorans DSM 12260]
 gi|310784256|gb|EFQ24654.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Aminomonas paucivorans DSM 12260]
          Length = 285

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 66/182 (36%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +++ GI+  L+     +     +V+     +    +      T   +  +M  +   
Sbjct: 22  FVLLVLGGILGFLILQGAGSLSWSFLVEPPRNGMTEGGILTPLVGTVQLIAVSMAFAFPV 81

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      A+       L   +  +  +P + F  F   +F      ++  + LAA 
Sbjct: 82  GVFTAVYLNEYARDDGFTRTLRLAVRSLAGVPSVVFGLFGFSFFCVFL--RMGASLLAAG 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +  +   +L N+P+D  + S     + WQ    + +P ++P ++   ++S
Sbjct: 140 LTLGCLALPVIVGAAEVALQNVPQDYRDASFGLGATRWQTIRRVVLPAALPSILTGAILS 199

Query: 200 MS 201
           + 
Sbjct: 200 VG 201



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-- 386
              L   +     ++   F   V+ G+   +  Q  G +   F  +     +  G I   
Sbjct: 4   RRTLADRATTLFLWLSMGFVLLVLGGILGFLILQGAGSLSWSFLVEPPRNGMTEGGILTP 63

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +   V LI ++     PVG++              +  ++   + LA  P+ VF    + 
Sbjct: 64  LVGTVQLIAVSMAFAFPVGVFTAVYLNEYARDDGFTRTLRLAVRSLAGVPSVVF---GLF 120

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHITGWRWW 494
             S++ +   +  SLL    T   +   VI GA        P D+++ +     T W+  
Sbjct: 121 GFSFFCVFLRMGASLLAAGLTLGCLALPVIVGAAEVALQNVPQDYRDASFGLGATRWQTI 180

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P  +TGAI + G        +    +      T GL   + +S     +  
Sbjct: 181 RRVVLPAALPSILTGAILSVGRVAG---ETAPIIFTGAAFFTPGLAKSLFQSVMALPYHV 237

Query: 555 VVLGVL 560
           +VL   
Sbjct: 238 LVLATA 243


>gi|254504060|ref|ZP_05116211.1| phosphate ABC transporter, permease protein PstA [Labrenzia
           alexandrii DFL-11]
 gi|222440131|gb|EEE46810.1| phosphate ABC transporter, permease protein PstA [Labrenzia
           alexandrii DFL-11]
          Length = 449

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 51/139 (36%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A   R+  ++   +  + ++P + F    +  F+
Sbjct: 229 SFFMMLVVLFLSLPIGVAASIYLEEFAPQNRITDLIEVNISNLAAVPSIVFGILGLAVFI 288

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      +  +       +  +  S   SL  +P  + + +     S  Q  ++  
Sbjct: 289 QFMHLPQSAPIVGGLVLTL-MTLPTIIISTRASLKAVPPSIRDAALGVGASKMQSVFHHV 347

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 348 LPLAMPGILTGTIIGLAQA 366



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++     ++++   + +P+G+              I+  I+     LAA P+ VF  L
Sbjct: 223 GASVVGSFFMMLVVLFLSLPIGVAASIYLEEFAPQNRITDLIEVNISNLAAVPSIVFGIL 282

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P        L++   T   I+ +  A   A P   ++ A     +  + 
Sbjct: 283 GLAVFIQFMHLPQSAPIVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQS 342

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 343 VFHHVLPLAMPGILTGTIIGLAQA 366


>gi|254466624|ref|ZP_05080035.1| phosphate transport system permease protein 2 [Rhodobacterales
           bacterium Y4I]
 gi|206687532|gb|EDZ48014.1| phosphate transport system permease protein 2 [Rhodobacterales
           bacterium Y4I]
          Length = 452

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   M   + ++L      +      A    L  ++   +  + ++P + F    + 
Sbjct: 229 MLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWLTDMIEVNISNLAAVPSIVFGILGLA 288

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N        A L     +    +  +  S   SL ++P  + + +     S  Q  +
Sbjct: 289 VFINYM-HLPTSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQAVF 347

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 348 HHVLPLAAPGILTGTIIGLAQA 369



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 28/216 (12%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M   + ++ +   + +P+G+              ++  I+     LAA P+ VF  L
Sbjct: 226 GVSMLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWLTDMIEVNISNLAAVPSIVFGIL 285

Query: 437 VVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++      +   +  L   L++   T   I+ +  A   + P   ++ A     +  + 
Sbjct: 286 GLAVFINYMHLPTSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQA 345

Query: 494 WRYIILPGIFPYYVTGAITACGGA--------------WNASIVSEVASWGHIHLRTTGL 539
             + +LP   P  +TG I     A              + AS   E  + G +    + +
Sbjct: 346 VFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNAPETIADG-LLAPNSAM 404

Query: 540 GAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRF 572
            A I E  ++     +     G++I+  F++ +N  
Sbjct: 405 PAQIYEWAKRADPAFYERAWGGIIILLIFLVTMNTL 440


>gi|328956727|ref|YP_004374113.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
 gi|328673051|gb|AEB29097.1| phosphate ABC transporter [Carnobacterium sp. 17-4]
          Length = 294

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   +++  ++  +L           +            +      +   +L  MVIS  
Sbjct: 19  MFIVLILFSLLAFILWRGVPQISWEFLTQPARSFQVGGGIGIQLFNSFYLLLLTMVISAP 78

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK   +  ++   ++++ S+P +    F  + F+  +         A 
Sbjct: 79  LALGAAIYLSEYAKQNWVTDIIRTAIEVLSSLPSIVVGLFGFLIFVIQFDFGFSILSGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              IF   +  +T ++  SL  IP    E   +  LS W+    + +P ++PG++  M++
Sbjct: 139 ALTIFNLPL--LTRTIEDSLQAIPGVQREAGLALGLSRWETVTRIILPAALPGILTGMIL 196

Query: 199 SMS 201
           +  
Sbjct: 197 AAG 199



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 13/192 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--YQDVLYVIWLGCITMFRVVVLIIIA 397
           V Y L +F   ++  +   I W+ +  I   F         V     I +F    L+++ 
Sbjct: 13  VLYALSMFIVLILFSLLAFILWRGVPQISWEFLTQPARSFQVGGGIGIQLFNSFYLLLLT 72

Query: 398 SIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNP 448
            +I  P+ +              ++  I+   ++L++ P+ V   F  ++  +  +    
Sbjct: 73  MVISAPLALGAAIYLSEYAKQNWVTDIIRTAIEVLSSLPSIVVGLFGFLIFVIQ-FDFGF 131

Query: 449 NLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++    L +      +L   I     A P   +E   +  ++ W     IILP   P  +
Sbjct: 132 SILSGALALTIFNLPLLTRTIEDSLQAIPGVQREAGLALGLSRWETVTRIILPAALPGIL 191

Query: 508 TGAITACGGAWN 519
           TG I A G  + 
Sbjct: 192 TGMILAAGRIFG 203


>gi|239941625|ref|ZP_04693562.1| putative sugar ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239988088|ref|ZP_04708752.1| putative sugar ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 298

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 4/203 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVV 121
           +Y   + L   + +++S L  F+ AT   + R +    L+ +  + Q +P+         
Sbjct: 90  RYFLNSLLVAGTVVILSALIAFLAATAVTRFRFKFRTTLLIMFLVAQMVPVEALTIPLFF 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +      +G+ +    A        M       +  +P  LEE +     S  +  W
Sbjct: 150 LMRDFGQLNTLGSLILPHLAFSLPFAIWMLRGF---VKAVPEALEEAAYIDGASRTRFLW 206

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P   PGLV   + S    W   + ++  ++ DT      +   +     E D   I
Sbjct: 207 QILFPLVFPGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPDENDWGGI 266

Query: 242 LYAMLTMLGVIFLYDQLLFRPMI 264
           + A   M   + ++  L+ R ++
Sbjct: 267 MAASTVMTIPVLVFFVLVQRRLV 289



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 9/269 (3%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA-------WQSIGYIVNH 370
           RTL  ++               V+    ++W  +      G         W     + + 
Sbjct: 20  RTLLGVKRPGRLLAEAAALLIAVAVAFPLYWMVLSAFKPAGEIQSTDARPWTLAPSLDSF 79

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFP 429
               +          ++     ++I++++I       +        + +     +    P
Sbjct: 80  RRVFEQQDFGRYFLNSLLVAGTVVILSALIAFLAATAVTRFRFKFRTTLLIMFLVAQMVP 139

Query: 430 ANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
                 PL      +  LN    L L  +  +  + ++ +     A P   +E A     
Sbjct: 140 VEALTIPLFFLMRDFGQLNTLGSLILPHLAFSLPFAIWMLRGFVKAVPEALEEAAYIDGA 199

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  R+   I+ P +FP  V  ++ +    WN  + ++          T  +   +    +
Sbjct: 200 SRTRFLWQILFPLVFPGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPD 259

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
           +  +  ++    +M   VL     +   L
Sbjct: 260 ENDWGGIMAASTVMTIPVLVFFVLVQRRL 288


>gi|254463115|ref|ZP_05076531.1| phosphate ABC transporter, permease protein PstA [Rhodobacterales
           bacterium HTCC2083]
 gi|206679704|gb|EDZ44191.1| phosphate ABC transporter, permease protein PstA [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 432

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 8/143 (5%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + L     M++ L         A       A    +  ++   +  + ++P + F    +
Sbjct: 208 SMLGSFFMMLVVLALALPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGILGL 267

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F+N        A L     +    +  +  S   SL ++P  + + +     S  Q  
Sbjct: 268 AVFINSV-HLPQSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQSV 326

Query: 181 WYLGVPFSMPGLVWNMMMSMSGG 203
           ++  +P + PG+    ++ ++  
Sbjct: 327 FHHVLPLAAPGIFTGTIIGLAQA 349



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M     ++++   + +P+G+              I+  I+     LAA P+ VF  
Sbjct: 205 MGVSMLGSFFMMLVVLALALPIGVAASIYLEEFAPKNWITDIIEVNISNLAAVPSIVFGI 264

Query: 436 LVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +   +  L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 265 LGLAVFINSVHLPQSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 324

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P   TG I     A
Sbjct: 325 SVFHHVLPLAAPGIFTGTIIGLAQA 349


>gi|167464865|ref|ZP_02329954.1| phosphate ABC transporter, permease protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 285

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 74/194 (38%), Gaps = 9/194 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR---DIVDIVPITLDVHS-LPQYASR 67
           +      ++  LA   +IG++  +L+ I    +P    D +  +P  +     +      
Sbjct: 5   ATDFAATVYFWLAGFSIIGLLVWVLYRILSAGLPHLSWDFITGLPEDIMPGGGVGPMLFN 64

Query: 68  TTLRMLSAMVISLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   +  ++V SL   F       + AK  RL   +   ++ + S+P + F  F  + F+
Sbjct: 65  SFYILFLSLVFSLPVGFGAGIYLAVYAKKNRLTEFIRISVEALASVPSIVFGLFGFLLFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  K+     +   A+    V  +      +   +P    E S +   + WQ    + 
Sbjct: 125 QFFNLKISVLSGSLALALLNLPV--LVRVTEGAFRTVPHSYWEASLALGSTRWQAIRKVL 182

Query: 185 VPFSMPGLVWNMMM 198
            P ++P L+  + +
Sbjct: 183 FPAALPSLITGITL 196



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 71/190 (37%), Gaps = 17/190 (8%)

Query: 345 DIFWFCV--VCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVVLIII 396
             FW     + G+ + + ++ +   + H ++       + +         +F    ++ +
Sbjct: 12  VYFWLAGFSIIGLLVWVLYRILSAGLPHLSWDFITGLPEDIMPGGGVGPMLFNSFYILFL 71

Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFPLVV-------SCVSYYHLNP 448
           + +  +PVG   G    + +K     + +  +  A    P +V         V +++L  
Sbjct: 72  SLVFSLPVGFGAGIYLAVYAKKNRLTEFIRISVEALASVPSIVFGLFGFLLFVQFFNLKI 131

Query: 449 NLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
           ++    L +      +L  V  GA    P+ + E + +   T W+  R ++ P   P  +
Sbjct: 132 SVLSGSLALALLNLPVLVRVTEGAFRTVPHSYWEASLALGSTRWQAIRKVLFPAALPSLI 191

Query: 508 TGAITACGGA 517
           TG     G A
Sbjct: 192 TGITLVAGRA 201


>gi|119387033|ref|YP_918088.1| phosphate ABC transporter, inner membrane subunit PstA [Paracoccus
           denitrificans PD1222]
 gi|119377628|gb|ABL72392.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Paracoccus denitrificans PD1222]
          Length = 447

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 56/140 (40%), Gaps = 6/140 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   ML  + +++      +      A K+R    ++   +  + ++P + F    +  F
Sbjct: 228 SLYMMLVVLALAVPIGVAASIYLEEFAPKNRW-TDIIEVNISNLAAVPSIVFGILGLAAF 286

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +N + G    A +     +    +  +  +   +L  +P  + + +     S  Q  ++ 
Sbjct: 287 IN-FAGLPQSAPIVGGLVLTLMTLPTIIIATRAALKAVPPSIRDAALGVGASKMQSVFHH 345

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P +MPG++   ++ ++  
Sbjct: 346 VLPLAMPGILTGTIIGLAQA 365



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            I +   + ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 222 GIAILGSLYMMLVVLALAVPIGVAASIYLEEFAPKNRWTDIIEVNISNLAAVPSIVFGIL 281

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P        L++   T   I+    A   A P   ++ A     +  + 
Sbjct: 282 GLAAFINFAGLPQSAPIVGGLVLTLMTLPTIIIATRAALKAVPPSIRDAALGVGASKMQS 341

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 342 VFHHVLPLAMPGILTGTIIGLAQA 365


>gi|254707083|ref|ZP_05168911.1| sugar ABC transporter, permease protein [Brucella pinnipedialis
           M163/99/10]
 gi|261314553|ref|ZP_05953750.1| sugar ABC transporter, permease [Brucella pinnipedialis M163/99/10]
 gi|261303579|gb|EEY07076.1| sugar ABC transporter, permease [Brucella pinnipedialis M163/99/10]
          Length = 289

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 8/132 (6%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGF-LTF 118
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +   L  
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIALSLPL 140

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +VY          G  L  +       +W +          +P+DL E ++    + WQ
Sbjct: 141 FMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFF----RQVPKDLAEAAQIDGCTRWQ 196

Query: 179 KFWYLGVPFSMP 190
            FW +  P + P
Sbjct: 197 AFWQVEFPLAGP 208



 Score = 37.6 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 57/223 (25%), Gaps = 33/223 (14%)

Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349
           R    +  + Y    F + L   +      L  +R   P   +       +   + +  +
Sbjct: 11  RMRRRIARVFYLVGLFLAMLVICLPGFWIVLSSLR---PPVEIMAKPPVWIPQDISLDAY 67

Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409
             +   A         Y  N                     V   +++ II +  G    
Sbjct: 68  RTMFSGAGAGGVPVWDYFRNSIIVS----------------VTSTVVSLIIGMSGGYAFA 111

Query: 410 FRPHISSKIQPF-AQLLAAFPANVF-FPLVVSCVSYYHLNPNLWLSL----LMIFGTQWY 463
                          L  + P      PL +       ++ +  L L    L I  T W 
Sbjct: 112 RFRFRGKSATFLGFMLTRSVPGIALSLPLFMVYSRIGIIDTHFGLILTYVALNIPFTIWL 171

Query: 464 I--LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           I   F         P D  E A     T W+ +  +  P   P
Sbjct: 172 IDGFF------RQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGP 208


>gi|222147390|ref|YP_002548347.1| phosphate ABC transporter permease protein [Agrobacterium vitis S4]
 gi|221734380|gb|ACM35343.1| phosphate ABC transporter permease protein [Agrobacterium vitis S4]
          Length = 445

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 58/144 (40%), Gaps = 2/144 (1%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           +L   A      ++ A+ I +  +      A K+R    ++   ++ + ++P + F    
Sbjct: 226 ALIGTAYMMLTVLILALPIGVATSIYLEEFAPKNRW-TDLIEVNINNLAAVPSIVFGLLG 284

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  F+N + G    A L     +    +  +  +   +L  +P  +   +     S  Q 
Sbjct: 285 LAVFIN-FAGLPRSASLVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQT 343

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGG 203
            ++  +P +MPG++   ++ ++  
Sbjct: 344 VFHHVLPLAMPGVLTGTIIGLAHA 367



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 6/188 (3%)

Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           S++++S     +   +    A+  ++ +  ++    +  +   V      T + ++ ++I
Sbjct: 180 SSRKISDQQIGWMNTLAESGALAKSFNTGIFVNGASSRPEAAGVGVALIGTAYMMLTVLI 239

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP---N 449
           +A  I +   I++     +   +  I+     LAA P+ VF  L ++    +   P   +
Sbjct: 240 LALPIGVATSIYLEEFAPKNRWTDLIEVNINNLAAVPSIVFGLLGLAVFINFAGLPRSAS 299

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   L++   T   I+    A   A P   +  A     +  +   + +LP   P  +TG
Sbjct: 300 LVGGLVLTLMTLPTIIIATRAALKAVPPSIRAAALGLGASKMQTVFHHVLPLAMPGVLTG 359

Query: 510 AITACGGA 517
            I     A
Sbjct: 360 TIIGLAHA 367


>gi|13508349|ref|NP_110299.1| Psta /Pstc-like ABC transporter; phosphate specific [Mycoplasma
           pneumoniae M129]
 gi|2501387|sp|P75185|PSTA_MYCPN RecName: Full=Phosphate transport system permease protein pstA
           homolog
 gi|1673899|gb|AAB95880.1| Psta /Pstc-like ABC transporter; phosphate specific [Mycoplasma
           pneumoniae M129]
 gi|301633379|gb|ADK86933.1| phosphate ABC transporter, permease protein PstA [Mycoplasma
           pneumoniae FH]
          Length = 651

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 18/253 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LAF  V+GI+  +     +             +  V +  +    T + +L A+ I+  
Sbjct: 373 VLAFGFVLGILLFVFINGSQA---IQRSGSTVFSFGVDTTGRALVNTLVIILVAIGITFP 429

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM---NLYPGKVIGAE 135
              + A       KSR        ++D + S+P + +  F + +F+    L  G   G  
Sbjct: 430 IALLIAIWLNEYTKSRIAKNTFSFVIDSLSSMPSIIYGLFGLSFFLRTLQLSAGGANGTS 489

Query: 136 LAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           L A     +  V        Q +L N+  DL   + +  +S  +  W + +P ++ GL+ 
Sbjct: 490 LMAGILTISVVVLPFLIRTCQEALNNVSWDLRVSAYALGVSKREVIWKIVLPGALKGLII 549

Query: 195 NMMMSMS-----GGWFFVVASEMIVVGDTVIPLPG--IGSYIALAIKEQDLLAILYAMLT 247
            ++++++        FF+ A  +       + LPG  + + I   +   +  A+   + T
Sbjct: 550 ALILTINRIIAETAPFFITAG-LASSNLFDLSLPGQTLTTRIYGQLFSTNSTAVDVMLET 608

Query: 248 MLGVIFLYDQLLF 260
            L  I     L+F
Sbjct: 609 ALVSIVFLMFLIF 621



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 72/535 (13%), Positives = 160/535 (29%), Gaps = 44/535 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F+L+     I L      T P     ++ +  ++ +         L      + SL+ 
Sbjct: 24  VCFLLLFISFFIFLLIEAAKTGPDFTKSLLGLEFNLGAKKASIWFPLLVSFVVSIGSLII 83

Query: 83  TFVYATLAAKS------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG--KVIGA 134
                   +         R+   L+ ++DI+  IP + F  F      +++     +   
Sbjct: 84  ASYIGVRTSIFLVYRCKPRIRKKLLLVIDILSGIPSVIFGLFATQILSSIFRDVLHLPPL 143

Query: 135 ELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
            L  +  + +  +  +  S    +L ++   L  V+ S   +     + +        LV
Sbjct: 144 SLLNVIVMLSFMIIPIVISLTTNALLHVESSLMTVAISLGENKTSVIYKVIKKEIKAQLV 203

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDT-----------VIPLPGIGSYIALAIKEQDLLAIL 242
             ++++        +A   I+                  L  +GS I+  I  ++    +
Sbjct: 204 VILVLAFGRAISETMAVNFILQSVNYQEVIANDRFFTSDLKTLGSVISTFIFSENGDEQV 263

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302
             +L   G+I            +WS + +           S  +Y      F+     + 
Sbjct: 264 SGVLYTFGIIIFVLISFLNFFAIWSTRPKTLERYPFLKKISNFIYQVVW--FIPNNIGAL 321

Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362
           +   +     VKK+       R  F +  +Q     +V     I        +A G    
Sbjct: 322 FTDLTARRQQVKKITAANVEQRATFFKERMQTNHLNKVYTSWKILQEIFCAVLAFGFVLG 381

Query: 363 SIGYIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWI----PVGIWIGF----- 410
            + ++  + +         V   G  T  R +V  ++  ++ I    P+ + I       
Sbjct: 382 ILLFVFINGSQAIQRSGSTVFSFGVDTTGRALVNTLVIILVAIGITFPIALLIAIWLNEY 441

Query: 411 --RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQ 461
                  +        L++ P+ ++    +S                +L   +L I    
Sbjct: 442 TKSRIAKNTFSFVIDSLSSMPSIIYGLFGLSFFLRTLQLSAGGANGTSLMAGILTISVVV 501

Query: 462 WYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              L        +    D +  A +  ++       I+LPG     +   I    
Sbjct: 502 LPFLIRTCQEALNNVSWDLRVSAYALGVSKREVIWKIVLPGALKGLIIALILTIN 556


>gi|330899988|gb|EGH31407.1| D-methionine ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 214

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           V  L Q    T L +  + +I+LL     A +   S +        +  VL   +++ +S
Sbjct: 3   VDRLLQGTLDTFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRS 62

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  +   ++ F  +  G   G   AA+  +  +           SL  +   L E +
Sbjct: 63  IPFLILM-VALIPFTRMIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLVEAA 120

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++     W   W++ +P + PG+V    +++
Sbjct: 121 QAMGCRRWHIIWHVLLPEAHPGIVGGFTITL 151



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 69/209 (33%), Gaps = 17/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA ++ IP+ + +           P I+  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLLGIPLAVILVTSSKGGIYEAPGINRVLGGFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRMIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G    ++       +V
Sbjct: 133 HVLLPEAHPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDT-------QV 185

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L V+I+   V+AL +     L     R 
Sbjct: 186 MLTVIILLVAVVALVQLGGDRLARSFDRR 214


>gi|322805817|emb|CBZ03382.1| methionine ABC transporter permease protein [Clostridium botulinum
           H04402 065]
          Length = 218

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTF 118
           +T   ++ + ++S +  F+ A + A         ++ +  +L  I+++++S+P    L  
Sbjct: 18  QTIYMIIISTILSFVIGFILAIVLAVTDERGIKPNKIIYGILSTIINVLRSVP-FIILAV 76

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F     G  IG E AAI  +  +    +   +  SL  +   L E ++SF  S  Q
Sbjct: 77  AIIPFTRNIVGTSIG-ENAAIVPLTIASAPFIARLIESSLKEVNPSLIEAAKSFGASNIQ 135

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
             + + V  ++P +  ++ ++
Sbjct: 136 IIFKVMVKEAIPSINLDLTLA 156



 Score = 38.8 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 6/149 (4%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           +    +           +  +   T+   V+  I+A ++ +     I     I   +   
Sbjct: 3   EITTLMKQIILLSLWQTIYMIIISTILSFVIGFILAIVLAVTDERGIKPNKIIYGILSTI 62

Query: 422 AQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             +L + P    A    P     +    +  N  +  L I    + I   + +       
Sbjct: 63  INVLRSVPFIILAVAIIPF-TRNIVGTSIGENAAIVPLTIASAPF-IARLIESSLKEVNP 120

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYY 506
              E A SF  +  +    +++    P  
Sbjct: 121 SLIEAAKSFGASNIQIIFKVMVKEAIPSI 149


>gi|323143811|ref|ZP_08078478.1| ABC transporter, permease protein [Succinatimonas hippei YIT 12066]
 gi|322416403|gb|EFY07070.1| ABC transporter, permease protein [Succinatimonas hippei YIT 12066]
          Length = 275

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 76/193 (39%), Gaps = 19/193 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + +++ S++    +   AA++      L + +      ++++P   ++   +V       
Sbjct: 92  VLSLLYSMVLGIFFGMFAARNVFKINALSVFVQSFFSFLRAVPTPIWVLLMLVCLG---- 147

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              +G E         +  +  T S  QS  +IP +  E   +   +    F+   +P +
Sbjct: 148 ---MGPEAGVAGLCVHTTAF-FTKSFAQSFESIPEETLEALEATGTTRVNVFFNAVLPAA 203

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
           +  +V     +  G    V  SE  ++G  ++   G+G  I+ +++  D      A+  +
Sbjct: 204 LSQIV-----AWCGMRLEVNFSECTILG--MVGAGGVGFVISTSLQGYDYGTAGVAITLV 256

Query: 249 LGVIFLYDQLLFR 261
             V +  +++  R
Sbjct: 257 FIVAYCIERMFVR 269



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 73/214 (34%), Gaps = 19/214 (8%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQ 423
           + H+ +  +  ++     T+   V+ ++ + ++ I  G++          +S  +Q F  
Sbjct: 69  LGHYDFSKIDLILTSLLDTICIAVLSLLYSMVLGIFFGMFAARNVFKINALSVFVQSFFS 128

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L A P  ++   V+  +    + P   ++ L +  T ++   +      + P +  E  
Sbjct: 129 FLRAVPTPIW---VLLMLVCLGMGPEAGVAGLCVHTTAFFTK-SFAQSFESIPEETLEAL 184

Query: 484 SSFHITGWRWWRYIILPGIFPYYVT--GAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            +   T    +   +LP      V   G              SE    G   +   G+G 
Sbjct: 185 EATGTTRVNVFFNAVLPAALSQIVAWCGMRLEVN-------FSECTILG--MVGAGGVGF 235

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            I+ S +   +    + + ++      + R    
Sbjct: 236 VISTSLQGYDYGTAGVAITLVFIVAYCIERMFVR 269


>gi|254721863|ref|ZP_05183652.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
          Length = 288

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 131 LGLTLFVYAL--HLGESIIAAAMTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYRIVLPYAFPGIITGCTLAISRA 214



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  ++ M       ++        + PN   
Sbjct: 118 QTLAGVPSVVFGLLGLTLFVYALHLGESIIAAAMTMSLLVLPTVVVASQEAIRSVPNSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 214


>gi|89900643|ref|YP_523114.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
 gi|89345380|gb|ABD69583.1| binding-protein-dependent transport systems inner membrane
           component [Rhodoferax ferrireducens T118]
          Length = 256

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 14/205 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           TL  L  + +S  F  +    A    +R  G    P+++ +    +    TF  V  + +
Sbjct: 61  TLAHLKIVGLSSGFAVIVGVAAGIFATRASGREFRPLIETV----VAAGQTFPPVAVLAV 116

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               V   E  A+ A+    +  +  S    + ++P    E +    LS WQ+   + +P
Sbjct: 117 AVPVVGFGEAPALIALALYGLLPVLQSTLAGIASVPPAAREAAEGLGLSPWQRLLRVELP 176

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P ++  +  S+        A+    VG   + LP     I + +   +   +L   +
Sbjct: 177 LAAPVILAGVRTSVII--NIGTAAIASTVGAKTLGLP-----IIVGLSGFNTAYVLQGAV 229

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271
            +  +  + D L F  ++    +++
Sbjct: 230 LVGLLAVVTD-LGFERLVQRLGRWQ 253



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 6/215 (2%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387
           P +       +            +V G+A      +  +             + L    +
Sbjct: 6   PVSASGRAWARDPLPWALAALLLLVFGMAWLKPLFAALFPALERPVYAQDSFLGLTLAHL 65

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             V +    A I+ +  GI+         + +P  + + A         V++        
Sbjct: 66  KIVGLSSGFAVIVGVAAGIF--ATRASGREFRPLIETVVAAGQTFPPVAVLAVAVPVVGF 123

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                 + +       +L + +AG ++ P   +E A    ++ W+    + LP   P  +
Sbjct: 124 GEAPALIALALYGLLPVLQSTLAGIASVPPAAREAAEGLGLSPWQRLLRVELPLAAPVIL 183

Query: 508 TGAITA----CGGAWNASIVSEVASWGHIHLRTTG 538
            G  T+     G A  AS V        I +  +G
Sbjct: 184 AGVRTSVIINIGTAAIASTVGAKTLGLPIIVGLSG 218


>gi|226361729|ref|YP_002779507.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226240214|dbj|BAH50562.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 216

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 69/179 (38%), Gaps = 12/179 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               L  L  +V+ ++       LA ++RR+   +V    ++ +IP L          + 
Sbjct: 18  GWHILLSLVPIVVGVIIALPIGWLAHRNRRINPYVVGTAGLLYTIPSLALF-----VLLP 72

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G  I   +  I A+    V  +   +  +L ++P++    + +     +Q    + +
Sbjct: 73  PILGTKILDPMNIIVALTIYTVAMLVRVVADALDSVPQETVLAATAMGYRPYQTLLKVQL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           P  +P +   + ++       VV++  +V    ++ +P IGS      + +    I+  
Sbjct: 133 PVGVPVICAGLRVA-------VVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIIAG 184



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V I++  II +P+G        I+  +   A LL   P+   F L+   +    L+P  
Sbjct: 25  LVPIVVGVIIALPIGWLAHRNRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKILDPMN 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L I+     +   V     + P +    A++     ++    + LP   P    G 
Sbjct: 85  IIVALTIYTVAMLVRV-VADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVICAGL 143

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
             A     +   ++ +            +G+   +  +   +  ++ G
Sbjct: 144 RVAVVSNVSLVSLAALLGIPQ-------IGSLFTQGFQLRFYTPIIAG 184


>gi|149376560|ref|ZP_01894321.1| phosphate ABC transporter, permease protein [Marinobacter algicola
           DG893]
 gi|149359227|gb|EDM47690.1| phosphate ABC transporter, permease protein [Marinobacter algicola
           DG893]
          Length = 424

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 8/128 (6%)

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +F     AA          +L   +   ++ + ++P + F    +  F+NL+ G      
Sbjct: 220 SFPIGVAAAIYLEEFAPQNKLTDFIEVNINNLAAVPSIIFGLLGLAVFINLF-GMPRSVP 278

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +     +    +  +  S   ++ ++P  + E +     S  Q   +  +P +MPG++  
Sbjct: 279 VVGGLVLTLMTLPTIIISSRAAIKSVPPSIREAAEGIGASKMQVVLHHVLPLAMPGMLTG 338

Query: 196 MMMSMSGG 203
            ++ M+  
Sbjct: 339 SIIGMAQA 346



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 3/96 (3%)

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           LAA P+ +F  L ++        P    +   L++   T   I+ +  A   + P   +E
Sbjct: 251 LAAVPSIIFGLLGLAVFINLFGMPRSVPVVGGLVLTLMTLPTIIISSRAAIKSVPPSIRE 310

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            A     +  +   + +LP   P  +TG+I     A
Sbjct: 311 AAEGIGASKMQVVLHHVLPLAMPGMLTGSIIGMAQA 346


>gi|296119990|ref|ZP_06838544.1| putative transporter [Corynebacterium ammoniagenes DSM 20306]
 gi|295967144|gb|EFG80415.1| putative transporter [Corynebacterium ammoniagenes DSM 20306]
          Length = 555

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 65/508 (12%), Positives = 155/508 (30%), Gaps = 52/508 (10%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK----SRRLGMVLVPILDIMQSIPIL 113
           +  L      T   +  A  ++++ +   +  AA+    +  +  +    + +M++IP L
Sbjct: 64  IGELTSMIVETLAIVFLATALAVVLSVPVSLWAARPTSPNTTVHWLSRAFIVLMRAIPDL 123

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
                 +  F     G ++   L +I  I              ++  +     E  +S  
Sbjct: 124 ILAILFLRVFGLGSLGGILAMGLHSIGMIGKL--------YSDAIEELDDGPREAIQSNG 175

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
               Q+ W       MP ++   +          V    + VG       GIG  IA ++
Sbjct: 176 AGRNQQIWSAIPQTLMPQIIATALHRFDINLRTSVLLGYVGVG-------GIGQEIADSL 228

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA--DSWVLYLFRK 291
           +  D          M   I +    +   ++  + +  +   T   P+   +W   LF K
Sbjct: 229 RVLDYQR------GMALAIVVLLLCIAVELLSGALRAAIMNRTSNKPSWRQTWSDKLFGK 282

Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351
                 +  ++         + +++ R L +              +  +   L       
Sbjct: 283 KGDGTQVAVAAPATSINPPWSAERVNRVLVMATIVILTVLSWFAVDLSLREFL------- 335

Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW---- 407
              V +     ++   +   +      +  L   T+        + +++ IP+G+     
Sbjct: 336 ---VGLTELPATLALFLPPSSGGIAADIFLLMVDTLKIAFAATFLGAVLAIPIGVLAARN 392

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +     ++S  + F  ++   P  +   + V       +   L LS     G    +   
Sbjct: 393 VVMNKWVNSTFRIFIVVVRGIPELILAIVFVVISGLGAVAGTLALS----LGAVGLLSKL 448

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V         D +E   +   +  + +    +    P +V   +        ++ + +V 
Sbjct: 449 VADSIEETDMDVQEAVRAAGASNVQVFFASTIRQAAPAFVAHTLYLLDNNIRSATLLDVV 508

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEV 555
             G       G+G  +  ++    F  V
Sbjct: 509 GAG-------GIGFQLLNASRVNQFDVV 529



 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 23/203 (11%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINIL---------LHGIQETTVPRDIVDIVPIT 55
           +I PP+ + R+  N   ++A ++++ +++           L G+ E      +       
Sbjct: 297 SINPPWSAERV--NRVLVMATIVILTVLSWFAVDLSLREFLVGLTELPATLALFLPPSSG 354

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM----QSIP 111
                +      T     +A  +  +       LAA++  +   +     I     + IP
Sbjct: 355 GIAADIFLLMVDTLKIAFAATFLGAVLAIPIGVLAARNVVMNKWVNSTFRIFIVVVRGIP 414

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            L      VV          +   L A+  +           +  S+     D++E  R+
Sbjct: 415 ELILAIVFVVISGLGAVAGTLALSLGAVGLLSKL--------VADSIEETDMDVQEAVRA 466

Query: 172 FRLSGWQKFWYLGVPFSMPGLVW 194
              S  Q F+   +  + P  V 
Sbjct: 467 AGASNVQVFFASTIRQAAPAFVA 489


>gi|270290711|ref|ZP_06196935.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici
           7_4]
 gi|270280771|gb|EFA26605.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici
           7_4]
          Length = 304

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 19/187 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           ++R   +L  +++++  IP + +    LT  V    +++ G   G    A+  +    + 
Sbjct: 114 NKRRRGLLQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGILAGALVLL-VMILP 172

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     SL  +PR   E S +   + WQ    + V  S+PGL+  ++  M+  +   +
Sbjct: 173 TVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGEAL 232

Query: 209 ASEMIVVGD--------------TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           A +M++                 T +   GIG+ +   +    L ++   +L M     L
Sbjct: 233 AVQMVIGNAAVLPKDVLTPAATLTSVLTTGIGNTVLDTLPNNALWSLALVLLIMSLFFNL 292

Query: 255 YDQLLFR 261
             +++ +
Sbjct: 293 LIRMIGK 299



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 23/185 (12%)

Query: 411 RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
                  +Q   +LL   P+ V+         P + S              +L++     
Sbjct: 114 NKRRRGLLQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGILAGALVLLVMI-LP 172

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    +    A P  ++E + +   T W+    +++    P  +T  I     A+  ++
Sbjct: 173 TVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGEAL 232

Query: 523 VSEVASWGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             ++                     + TTG+G  + ++    +   + L +LIM  F   
Sbjct: 233 AVQMVIGNAAVLPKDVLTPAATLTSVLTTGIGNTVLDTLPNNALWSLALVLLIMSLFFNL 292

Query: 569 LNRFL 573
           L R +
Sbjct: 293 LIRMI 297


>gi|251798815|ref|YP_003013546.1| phosphate ABC transporter inner membrane protein PstC
           [Paenibacillus sp. JDR-2]
 gi|247546441|gb|ACT03460.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus sp. JDR-2]
          Length = 316

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 101/263 (38%), Gaps = 12/263 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +LA +   G++        E  +  +          +  +    + T L ++ ++ +SLL
Sbjct: 56  ILALMFRTGVLTFGDVSFSEFFLSTEWSPETEQYGGLLFIFGTFALTLLTLIISVPLSLL 115

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELA 137
                +T       L  +L P++D++  IP + +    LT  +    N+    +    LA
Sbjct: 116 IAVFLSTFV--PAWLKNMLRPVMDLLVGIPSVVYGYLGLTVLIPLIRNVTGTGMGDGLLA 173

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  ++     S+  +P+   + S +   + +Q    + +P +  G+++ ++
Sbjct: 174 ASLVLTIMVLPTISRISDDSITAVPKKFSDASYALGATRFQTVVKVLIPSARSGIMYAVI 233

Query: 198 MSMSGGWFFVVASEMIVVGDTVIP------LPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           + M+      +A  M++     I          + S I + I      +     L ++G 
Sbjct: 234 LGMARAIGETMAVVMVIGNTPQIADSLLKPTSVLTSNIVMQIANVPFDSTWNYALYLMGF 293

Query: 252 IFLYDQLLFRPMIVWSNKFRLER 274
           + L   LL    + W  +  +++
Sbjct: 294 LLLAISLLMIVGVRWLQRRGVQQ 316



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           Y  +L++     +T+  +++ + ++ +I + +  ++     + + ++P   LL   P+ V
Sbjct: 89  YGGLLFIFGTFALTLLTLIISVPLSLLIAVFLSTFV--PAWLKNMLRPVMDLLVGIPSVV 146

Query: 433 F--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
           +         PL+ +       +  L  SL++       I        +A P  F + + 
Sbjct: 147 YGYLGLTVLIPLIRNVTGTGMGDGLLAASLVLTIMVLPTISRISDDSITAVPKKFSDASY 206

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +   T ++    +++P      +   I     A   ++   +       +  + L
Sbjct: 207 ALGATRFQTVVKVLIPSARSGIMYAVILGMARAIGETMAVVMVIGNTPQIADSLL 261


>gi|33861280|ref|NP_892841.1| putative phosphate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33640012|emb|CAE19182.1| putative phosphate ABC transporter [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 315

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 95/267 (35%), Gaps = 34/267 (12%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           +++ GII ++     E+     +  +V    +       A       L   + SLL T  
Sbjct: 37  IVLFGIILVVFIQSFESFSRYGLNFLVTSEWNPVRDEYGAFTAIYGTLVTSIFSLLITIP 96

Query: 86  YATLAAKS-------RRLGMVLVPILDIMQSIP--------ILGFLTFTVVYF------- 123
                A         + +  ++   ++++ +IP        I     F  V+F       
Sbjct: 97  LGVGTAIFITEDFVPKFVREIVGSFVELLAAIPSVVLGLWAIFVMEPFLRVFFVFLHNFF 156

Query: 124 --MNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKF 180
             + L+  +  G        I    +  +  S+   SL  +P+ L   +     S W+  
Sbjct: 157 GWIPLFSSEPAGRNSLLAIIILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKTI 216

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIALAIK 234
           + + +P ++ G++  +++++       +A  MI+            PG  I S +A    
Sbjct: 217 FSVILPAALSGIMAGILLALGRAMGETMAVTMIIGNSNSFSWSLLSPGYTISSMLANQFG 276

Query: 235 EQD---LLAILYAMLTMLGVIFLYDQL 258
           E D   + ++ YA   ++ +  + +  
Sbjct: 277 EADGSQVSSLFYAAFVLMILSLVVNIF 303



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 90/277 (32%), Gaps = 33/277 (11%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           + +F   +V  +    ++   G      +  + +   +     ++  +V  I + +I IP
Sbjct: 37  IVLFGIILVVFIQSFESFSRYGLNFLVTSEWNPVRDEYGAFTAIYGTLVTSIFSLLITIP 96

Query: 404 VGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYH--- 445
           +G+              +   +  F +LLAA P+ V          P +     + H   
Sbjct: 97  LGVGTAIFITEDFVPKFVREIVGSFVELLAAIPSVVLGLWAIFVMEPFLRVFFVFLHNFF 156

Query: 446 ----------LNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWW 494
                        N  L+++++      I+ ++     +  P   +  A     + W+  
Sbjct: 157 GWIPLFSSEPAGRNSLLAIIILVVMLLPIVTSIARDSLNQVPKKLRNAAYGIGASRWKTI 216

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEKG 550
             +ILP      + G + A G A   ++   +          + L  G  I    + + G
Sbjct: 217 FSVILPAALSGIMAGILLALGRAMGETMAVTMIIGNSNSFSWSLLSPGYTISSMLANQFG 276

Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
                 +  L    FVL +   + +    +  +   L
Sbjct: 277 EADGSQVSSLFYAAFVLMILSLVVNIFAQWLVKKFSL 313


>gi|331698883|ref|YP_004335122.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953572|gb|AEA27269.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 220

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 71/173 (41%), Gaps = 12/173 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L  +VI L+       LA ++     V+V +  ++ +IP L         F+ +  G  I
Sbjct: 23  LVPVVIGLVLAIPLGWLANRAGVGRTVVVNLAGLLYTIPSLALF-----VFLPVVLGTGI 77

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +  I A+    +  +  ++  +L  +P  L + + +   +  ++F  + +P S+P +
Sbjct: 78  LDPVNVIVALTVYSLALLVRTVADALEAVPPVLVDAATAMGYAPVRRFLAVELPVSVPVI 137

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           +  + ++        V+S  +V   +VI   G+G       +      ++  +
Sbjct: 138 LAGVRVA-------AVSSISLVTVGSVIGFGGLGQMFTDGFQRDITAEVVAGI 183



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 8/169 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V ++I  ++ IP+G          + +   A LL   P+   F  +   +    L+P  
Sbjct: 23  LVPVVIGLVLAIPLGWLANRAGVGRTVVVNLAGLLYTIPSLALFVFLPVVLGTGILDPVN 82

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L ++ +   ++  V     A P    + A++      R +  + LP   P  + G 
Sbjct: 83  VIVALTVY-SLALLVRTVADALEAVPPVLVDAATAMGYAPVRRFLAVELPVSVPVILAGV 141

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
             A   + +   V  V  +G       GLG    +  ++    EVV G+
Sbjct: 142 RVAAVSSISLVTVGSVIGFG-------GLGQMFTDGFQRDITAEVVAGI 183


>gi|323464358|gb|ADX76511.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           pseudintermedius ED99]
          Length = 308

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+ +F       AA       S++   ++ PIL+++  IP + +    LT        
Sbjct: 92  TLIATIFAVPVGLGAAIYLSEYASKKTRKIIKPILEVLAGIPTIVYGFFALTLVTPVLRT 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P       ++    +    +  +      ++ ++P+ + E +     +  +  + + +
Sbjct: 152 IFPSIGSFNAISPGLVVGVMIIPMIASMSEDAMSSVPQKIREGALGLGSTKLEMVFKVVI 211

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +  G++ ++++++S  
Sbjct: 212 PAATSGIMASIVLAISRA 229



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 17/182 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           +       Y IW   I   ++    +IA+I  +PVG+                 I+P  +
Sbjct: 71  NPFSATPRYGIWALIIGTLKI---TLIATIFAVPVGLGAAIYLSEYASKKTRKIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  V+         P++ +          +   L++       I        S+ 
Sbjct: 128 VLAGIPTIVYGFFALTLVTPVLRTIFPSIGSFNAISPGLVVGVMIIPMIASMSEDAMSSV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P   +E A     T       +++P      +   + A   A   +++  +A+       
Sbjct: 188 PQKIREGALGLGSTKLEMVFKVVIPAATSGIMASIVLAISRAIGETMIVSLAAGSSPSFD 247

Query: 536 TT 537
            +
Sbjct: 248 LS 249


>gi|304386236|ref|ZP_07368569.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304327593|gb|EFL94820.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 304

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 19/187 (10%)

Query: 93  SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           ++R   +L  +++++  IP + +    LT  V    +++ G   G    A+  +    + 
Sbjct: 114 NKRRRGLLQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGILAGALVLL-VMILP 172

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208
            +T     SL  +PR   E S +   + WQ    + V  S+PGL+  ++  M+  +   +
Sbjct: 173 TVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGEAL 232

Query: 209 ASEMIVVGD--------------TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           A +M++                 T +   GIG+ +   +    L ++   +L M     L
Sbjct: 233 AVQMVIGNAAVLPKDVLTPAATLTSVLTTGIGNTVLDTLPNNALWSLALVLLIMSLFFNL 292

Query: 255 YDQLLFR 261
             +++ +
Sbjct: 293 LIRMIGK 299



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 23/185 (12%)

Query: 411 RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
                  +Q   +LL   P+ V+         P + S              +L++     
Sbjct: 114 NKRRRGLLQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGILAGALVLLVMI-LP 172

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +    +    A P  ++E + +   T W+    +++    P  +T  I     A+  ++
Sbjct: 173 TVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGEAL 232

Query: 523 VSEVASWGH--------------IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             ++                     + TTG+G  + ++    +   + L +LIM  F   
Sbjct: 233 AVQMVIGNAAVLPKDVLTPAATLTSVLTTGIGNTVLDTLPNNALWSLALVLLIMSLFFNL 292

Query: 569 LNRFL 573
           L R +
Sbjct: 293 LIRMI 297


>gi|212638723|ref|YP_002315243.1| phosphate ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212560203|gb|ACJ33258.1| ABC-type phosphate transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 337

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 17/206 (8%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY-------ASR 67
             P +  L A + V+  I IL   + ET +  + V IV        LP          + 
Sbjct: 53  FMPKLLLLTATISVLTTIGILFTLLFETFIFFERVSIVEFLTSKEWLPWDEKTGSFGIAP 112

Query: 68  TTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LT 117
                L    I+++        +A       S +   VL PIL+++  IP + +    LT
Sbjct: 113 LVTGTLLTTAIAMVVAIPIGLASAIYLSEYASEKARKVLKPILEVLAGIPTIVYGFFALT 172

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F       + P   I   L+    +    +  +      ++ ++P  + E +     +  
Sbjct: 173 FVTPLLQKIIPSLGIFNALSPGIVMGVMIIPMVASLSEDAMSSVPNSIREGALGLGSTKL 232

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           +    + +P +  G+  + M+++S  
Sbjct: 233 EVALKVVLPAATSGIAASFMLAISRA 258



 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 73/220 (33%), Gaps = 27/220 (12%)

Query: 391 VVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPL 436
           ++   IA ++ IP+G+                 ++P  ++LA  P  V+         PL
Sbjct: 118 LLTTAIAMVVAIPIGLASAIYLSEYASEKARKVLKPILEVLAGIPTIVYGFFALTFVTPL 177

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           +   +    +   L   ++M       +        S+ PN  +E A     T       
Sbjct: 178 LQKIIPSLGIFNALSPGIVMGVMIIPMVASLSEDAMSSVPNSIREGALGLGSTKLEVALK 237

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAEST--E 548
           ++LP          + A   A   +++  VA          +      L AYI + T  +
Sbjct: 238 VVLPAATSGIAASFMLAISRAVGETMIVAVAGGSSPVFTFDVTKSIQTLTAYIVQVTTGD 297

Query: 549 KGSFPEVVLGV--LIMCCFVLALNRFLWHPLYLYGTRCLR 586
            G    V   +  + M  FV  L   L   L  Y +R  R
Sbjct: 298 AGYGTTVYYSIYAVGMTLFVFTLAMNL---LAQYISRRFR 334


>gi|150397149|ref|YP_001327616.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150028664|gb|ABR60781.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 559

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 74/524 (14%), Positives = 160/524 (30%), Gaps = 58/524 (11%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             F+L +  +  L     +     +   ++       +L          M+ ++V+  LF
Sbjct: 17  AVFLLSVLPLIHLGWAGLKGLEGGEAASVLLEAATFAALRNTLVAAAGGMVISLVVGALF 76

Query: 83  TFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFL--------TFTVVYFMNLYPGKVI 132
            FV A    + +       ++P++ I   +  L ++            +           
Sbjct: 77  AFVVALTDIRGKLALSFAFMLPMM-IPPQVTALAWVEMSGPSSPLLKTLGLAPPLGSPQP 135

Query: 133 GAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
              LA I  +   Q   + F ++   L   PRD  E +R    S W+ F  + +P + P 
Sbjct: 136 LYSLAGIALLLGVQHAPLVFLAIKAGLATHPRDGVEAARLSGASPWRVFRDIVLPLACPA 195

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L+    ++                      + GIG++             + A+L +   
Sbjct: 196 LIAGGAIAF---------------------ISGIGNF------------GIPAILGIPAS 222

Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311
           I     L+F     + +      T G     S ++        L          +  +  
Sbjct: 223 IETLPTLIFAKFASFGS-----STFGEIAVLSTIIASISAGGLLLQQRALKGRDYRLIGL 277

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371
              +   TLG +R           +   V+ +L +    +V    + +   ++       
Sbjct: 278 TGARAAFTLGRLRIAVETLLWGTLALVLVAPLLALVASSLVPAYGVPLTLHTVSLQAYGE 337

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPA 430
                   +     ++F      +   +I +P G  +  R   +++ +    ++  A P 
Sbjct: 338 VLFRQTVTLTALKNSVFLASAAAVGLLVIALPAGYLLAARRGRVANLLAILIEIPYALPG 397

Query: 431 NVFFPLVVSCVSY------YHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVA 483
            V     +   +         +   +W+ L     + + + L  V++         +E A
Sbjct: 398 IVLAVAFILAFAAPLPVIGVSIYGTIWIILAAYLSSFFAVSLKPVMSAFLQMDPSLEEAA 457

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
                   R  R ++LP + P      I     A N   VS + 
Sbjct: 458 RLAGAGFLRRMRDVLLPLVAPAAGASVILVFLIAANELTVSALL 501


>gi|163746317|ref|ZP_02153675.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Oceanibulbus indolifex HEL-45]
 gi|161380202|gb|EDQ04613.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Oceanibulbus indolifex HEL-45]
          Length = 224

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP--------ILDIMQSIPI 112
           L +   +T   +  + ++  LF        A S+R  ++  P        +++  +S+P 
Sbjct: 9   LLEATGQTLYMVAISAILGTLFGLPLGLFLATSQRGELLSAPWVNKILGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   AAI  +  + V  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRMVAGTSIGTT-AAIVPLTIATVPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++P +   + +++
Sbjct: 127 GATPVQIIRKVLLPEALPSITLGLTLAI 154



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 4/121 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNV 468
           P ++  +        + P  +   + +   +      ++  +  ++     T  +I   V
Sbjct: 50  PWVNKILGLVVNATRSVPFIILV-VAIIPFTRMVAGTSIGTTAAIVPLTIATVPFIARLV 108

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                   +   E A +   T  +  R ++LP   P    G   A       S +     
Sbjct: 109 ENAIREVDSGLIEAARAMGATPVQIIRKVLLPEALPSITLGLTLAIVSLIGYSAMVGAVG 168

Query: 529 W 529
            
Sbjct: 169 G 169


>gi|57235018|ref|YP_180890.1| phosphate ABC transporter, permease protein [Dehalococcoides
           ethenogenes 195]
 gi|57225466|gb|AAW40523.1| phosphate ABC transporter, permease protein [Dehalococcoides
           ethenogenes 195]
          Length = 283

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 20/223 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS--IIWIPVGIWIGFR-------PHIS 415
           G+  +         +   G I+   V  L ++    +I +PVGI              ++
Sbjct: 42  GFSWDFLITPPAGGLAGEGGISSTIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLT 101

Query: 416 SKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-VIAGAS 473
             I+   Q LA  P+ +F        V+  H   ++    L +      +L         
Sbjct: 102 RFIRYGVQTLAGVPSILFGLFGFALFVTALHFRFSILSGALTLACLLLPVLITATEEALK 161

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           A P  ++  A +   T W+   ++ILP   P   TG I   G A   +    V   G   
Sbjct: 162 AVPRSYRAGAMALGATKWQAVTHVILPAALPGIATGVILCAGRALGETACLYVTMGGSAA 221

Query: 534 LRTTGLG---------AYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +  + L           Y+A  T           VLI+    L
Sbjct: 222 MPESLLSGGRSLALHVFYLATETNAMDKAMATAAVLIVIIVGL 264



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 20/203 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTV 120
           T +  L  + ++LL        AA          RL   +   +  +  +P + F  F  
Sbjct: 65  TIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLTRFIRYGVQTLAGVPSILFGLFGF 124

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F+     +      A   A     V  +  +  ++L  +PR     + +   + WQ  
Sbjct: 125 ALFVTALHFRFSILSGALTLACLLLPV--LITATEEALKAVPRSYRAGAMALGATKWQAV 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----------YIA 230
            ++ +P ++PG+   +++          A   + +G +      + S          Y+A
Sbjct: 183 THVILPAALPGIATGVILCAGRA-LGETACLYVTMGGSAAMPESLLSGGRSLALHVFYLA 241

Query: 231 LAIKEQDLLAILYAMLTMLGVIF 253
                 D      A+L ++ V  
Sbjct: 242 TETNAMDKAMATAAVLIVIIVGL 264


>gi|326387439|ref|ZP_08209048.1| phosphate ABC transporter permease [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208095|gb|EGD58903.1| phosphate ABC transporter permease [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 434

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 60/139 (43%), Gaps = 10/139 (7%)

Query: 73  LSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +  M+++L   F    LAA        ++R   ++ + I + + ++P + F    +  F+
Sbjct: 220 IMTMLVTLALAFPVGVLAALYLEEYAPRNRWTDLIEISI-NNLAAVPSIIFGLLGLAVFL 278

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            ++P     A L     +    +  +  S   ++  +P  L + + +   S  Q  ++  
Sbjct: 279 VIFPNDRS-APLVGGMTLALMTMPVIVISGRNAIKAVPPSLRDAALAVGASPLQVVFHHV 337

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++ M+  
Sbjct: 338 LPMALPGILTGTIIGMARA 356



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 21/203 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCV 441
           ++ +++   +  PVG+           R   +  I+     LAA P+ +F    L V  V
Sbjct: 220 IMTMLVTLALAFPVGVLAALYLEEYAPRNRWTDLIEISINNLAAVPSIIFGLLGLAVFLV 279

Query: 442 SYYHLNPNLWLS-LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            + +      +  + +   T   I+ +      A P   ++ A +   +  +   + +LP
Sbjct: 280 IFPNDRSAPLVGGMTLALMTMPVIVISGRNAIKAVPPSLRDAALAVGASPLQVVFHHVLP 339

Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASW--------GHIHLRTTGLGAYI---AESTEK 549
              P  +TG I     A   +    +             +    T L   I   ++  ++
Sbjct: 340 MALPGILTGTIIGMARALGETAPLLMIGMRAFVASPPATLTSPATVLPVQIFLWSDEIDR 399

Query: 550 GSFPEVVLGVLIMCCFVLALNRF 572
           G        ++++  F+L +N  
Sbjct: 400 GFIERTSAAIIVLLVFLLVMNGL 422


>gi|268324464|emb|CBH38052.1| putative phosphate ABC transporter, permease protein [uncultured
           archaeon]
 gi|268324869|emb|CBH38457.1| putative phosphate transport system permease protein pstC
           [uncultured archaeon]
          Length = 351

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 82/215 (38%), Gaps = 21/215 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIP--ILGFLTFTVVYF 123
           T +  + A+VI+ +     A   A+     L  ++ P ++++  IP  +LGF    V+  
Sbjct: 132 TFIVGIGALVIAAVIGIPAAIFLAEYSPAWLRNIIKPCVELLVGIPSIVLGFFGLIVIVT 191

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                    G  + A + I          S+   S+  +P+  +E S +   +  Q    
Sbjct: 192 YIRDSFGGYGECILAGWIILAIMTLPHVISISEDSIRAVPKGYKEGSLALGATQLQTIKK 251

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG----------------IG 226
           + +P +  G++  M++ M       +A  M++    +  +P                 I 
Sbjct: 252 VILPNARSGILAAMVLGMGNAIGETMAVLMVIGNPEIPFIPSSILDPVRVLTSTIVIEIP 311

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
             +  ++ +Q L A+   +  ++ ++ L    L R
Sbjct: 312 YAVWGSLHQQALFALGVVLFIVVAILNLITTALVR 346



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--PH 413
           A+ + W     ++   ++     V  + C T    +  ++IA++I IP  I++       
Sbjct: 103 ALALGWDFFFGMIWRPSHNQYGIVPLVVC-TFIVGIGALVIAAVIGIPAAIFLAEYSPAW 161

Query: 414 ISSKIQPFAQLLAAFPANV--FFPLVVSCV----SYYHLNPNLWLSLLMIFGTQWYILFN 467
           + + I+P  +LL   P+ V  FF L+V       S+      +    +++       + +
Sbjct: 162 LRNIIKPCVELLVGIPSIVLGFFGLIVIVTYIRDSFGGYGECILAGWIILAIMTLPHVIS 221

Query: 468 VI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +      A P  +KE + +   T  +  + +ILP      +   +   G A   ++   +
Sbjct: 222 ISEDSIRAVPKGYKEGSLALGATQLQTIKKVILPNARSGILAAMVLGMGNAIGETMAVLM 281

Query: 527 ASW 529
              
Sbjct: 282 VIG 284


>gi|258515192|ref|YP_003191414.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257778897|gb|ACV62791.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 294

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L ML  + I LL     A  A   R    + + + + + S+P +    F ++ F+NL  
Sbjct: 70  FLTMLITIPIGLLAGIYLAEYAGAGRLTEYIRLSM-ETLTSLPSIVVGLFGLLIFVNLTG 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A   A        +     +++  +P +L E S +   + W+  W + +P +
Sbjct: 129 WGYTLMSGALALAAINLPF--IVRVSEETIRTVPVELREASLALGATRWETMWRVILPSA 186

Query: 189 MPGLVWNMMMSMS 201
            PG+V   +++  
Sbjct: 187 FPGIVTGTIIAAG 199



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 11/189 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASI 399
           ++       ++  +   I W     I   F       ++  G +   +F    L+ +  +
Sbjct: 15  WLGAAAVLAILALLLGYILWHGFRAISWDFLTAPPQTIMAGGGVGPQIFNSFYLLFLTML 74

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNL 450
           I IP+G+  G           ++  I+   + L + P+ V   F L++           +
Sbjct: 75  ITIPIGLLAGIYLAEYAGAGRLTEYIRLSMETLTSLPSIVVGLFGLLIFVNLTGWGYTLM 134

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +      +I+          P + +E + +   T W     +ILP  FP  VTG 
Sbjct: 135 SGALALAAINLPFIVRVSEETIRTVPVELREASLALGATRWETMWRVILPSAFPGIVTGT 194

Query: 511 ITACGGAWN 519
           I A G  + 
Sbjct: 195 IIAAGRVFG 203


>gi|222151444|ref|YP_002560600.1| ABC-type phosphate transport system permease component PstC
           [Macrococcus caseolyticus JCSC5402]
 gi|222120569|dbj|BAH17904.1| ABC-type phosphate transport system permease component PstC
           [Macrococcus caseolyticus JCSC5402]
          Length = 309

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 106/285 (37%), Gaps = 24/285 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYASRT 68
           +  P I  ++A + ++  I IL+  + ET      V      L+         P+Y   +
Sbjct: 25  KFIPTILAVIASISILTTIGILITLLTETITFFTRVSFSEFFLEKTWNAFGQDPKYGIIS 84

Query: 69  T-LRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQSIPILGF----LT 117
             L  L   +++ +F       AA       S ++  ++ PIL+I+  IP + +    LT
Sbjct: 85  LILGTLKVTLVATIFAVPVGLGAALYLSEYASDKVRRIIKPILEILAGIPTIVYGFFALT 144

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F      +++P       ++    I    V  +      ++  +P+ + E +     +  
Sbjct: 145 FVTPMLRSVWPDLGSFNAISPGLVIGIMIVPMIASLSEDAMSAVPQAIREGALGLGSTRL 204

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY-------IA 230
           +    +  P ++ G++ ++++++S      +   +         L    S        + 
Sbjct: 205 ETALKVVFPAALSGILASIVLAVSRAIGETMIVSLAAGSSPEFSLDFTNSLQTMTAFIVQ 264

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           +A  +    + +Y  +  +G       L+   +  W + KFR E 
Sbjct: 265 VATGDATFGSDIYYSIYAVGFTLFVFTLIMNMISQWITKKFREEY 309



 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 15/173 (8%)

Query: 372 TYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGF------RPHISSKIQPFAQL 424
           T+         G I++    + + ++A+I  +PVG+             +   I+P  ++
Sbjct: 70  TWNAFGQDPKYGIISLILGTLKVTLVATIFAVPVGLGAALYLSEYASDKVRRIIKPILEI 129

Query: 425 LAAFPANVF----FPLVVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVI-AGASAFP 476
           LA  P  V+       V   +     +   + ++   L+I      ++ ++     SA P
Sbjct: 130 LAGIPTIVYGFFALTFVTPMLRSVWPDLGSFNAISPGLVIGIMIVPMIASLSEDAMSAVP 189

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
              +E A     T       ++ P      +   + A   A   +++  +A+ 
Sbjct: 190 QAIREGALGLGSTRLETALKVVFPAALSGILASIVLAVSRAIGETMIVSLAAG 242


>gi|218887871|ref|YP_002437192.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758825|gb|ACL09724.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 596

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 63/463 (13%), Positives = 149/463 (32%), Gaps = 38/463 (8%)

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN-------MTFSMY 155
           +++  ++ P+L  L F    F  + P     A  +  F  + + +         M   + 
Sbjct: 100 VIEFFRNTPLLIQLFFWYFAFPAILPDNAREALFSIQFEFWCATIGLSIYTASFMAEVIR 159

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-- 213
             L +IP+ L E + S  LS +Q    + +P +   ++  +             SE +  
Sbjct: 160 AGLQSIPKGLLEAAYSSGLSYFQVLRTIILPLAFRAIIPPL------------GSEFLNN 207

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLL-AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL 272
           +   ++  + G+      A + + L      A      +      ++   +   + + RL
Sbjct: 208 MKNSSLAMVVGVAELTWHAQQVESLTFKGFEATSAATVLYLSLSLIISFILNGVNGRMRL 267

Query: 273 ERTTGIYPADSWVLYLFR-----KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF 327
           +   G       V  L       +  F+R +  +        +         +      +
Sbjct: 268 DTAPGRSIPVLVVGALLTPLGLIRRMFIRPVTRALRARRRAAAQTTYTPLAAMLHQWGGY 327

Query: 328 PENFLQLCSNQRVSYMLDIFWFCV---VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
                 L        +L    + V   + G    + ++++  ++           ++LG 
Sbjct: 328 AARAAVLAGKGLFVALLAGLLYSVGKGLLGFQWHVVFENLRSLLIWHFPTGRPDEMFLGL 387

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF-----AQLLAAFP---ANVFFPL 436
             +   +++ +IA  +   +G+ +G     S+++         +L+   P      +   
Sbjct: 388 GGLAYSLLMAVIAISVSFFIGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVYF 447

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +  +    LN     +  +   T  YI   V  G    P    E A S  +T  +  R 
Sbjct: 448 FIPVMFGTTLNVFWSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMRR 507

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           I+LP      +   +      +  + ++ V     +     G+
Sbjct: 508 IVLPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGI 550



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVPILDIMQSIPILGFLTFTVVYF 123
            + + L  + A+ +S           + S R+  +  +  +++++  P L  + F V +F
Sbjct: 390 LAYSLLMAVIAISVSFFIGLAVGVGRSSSNRVFRIPCLLYIELIRGNP-LIIVIFWVYFF 448

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           + +  G  +    +A +A+       +   +   + NIP    E + S  L+  Q    +
Sbjct: 449 IPVMFGTTLNVFWSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMRRI 508

Query: 184 GVPFSM 189
            +P ++
Sbjct: 509 VLPQAL 514


>gi|218282141|ref|ZP_03488440.1| hypothetical protein EUBIFOR_01022 [Eubacterium biforme DSM 3989]
 gi|218216867|gb|EEC90405.1| hypothetical protein EUBIFOR_01022 [Eubacterium biforme DSM 3989]
          Length = 292

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+    +      + AK   +   L   ++ + S+P +    F  + F+
Sbjct: 65  TIYLVFISLLVSVPIGVLAGIYLAMYAKPGLVTRFLRTCIETLSSLPSIVVGLFGYLIFL 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +  + LA   +I    +  +T +   ++  +P    + S     + WQ  +++ 
Sbjct: 125 VVL--GLSKSLLAGALSISILSLPLITTTTEDAIKGLPEGYYQGSMGLGATKWQTIFHVL 182

Query: 185 VPFSMPGLVWNMMMSMSGGW 204
           +P  +  ++  ++++   G+
Sbjct: 183 LPACLSRIMTGVILAAGRGF 202



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 60/162 (37%), Gaps = 5/162 (3%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQ 419
            +G     F +     +      T++ V + ++++  I +  GI++        ++  ++
Sbjct: 42  LLGAKPEMFGFSRSGSIGNQVFNTIYLVFISLLVSVPIGVLAGIYLAMYAKPGLVTRFLR 101

Query: 420 PFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
              + L++ P+ V   F  ++  V        L  +L +   +   I           P 
Sbjct: 102 TCIETLSSLPSIVVGLFGYLIFLVVLGLSKSLLAGALSISILSLPLITTTTEDAIKGLPE 161

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            + + +     T W+   +++LP      +TG I A G  + 
Sbjct: 162 GYYQGSMGLGATKWQTIFHVLLPACLSRIMTGVILAAGRGFG 203


>gi|89055191|ref|YP_510642.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88864740|gb|ABD55617.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
          Length = 316

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 70/223 (31%), Gaps = 20/223 (8%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
               + D +  I  G +      V  ++     I   + I     +   + P    +AA 
Sbjct: 108 TDILWADFVQTILRGAL------VGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAAL 161

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P     P++V    +   +    +  ++ F     +L N + G        +++  ++  
Sbjct: 162 PIVGTAPILVMWYGFGPSSKVAVVVAMVFF----PMLVNAVQGLKTSNAIQRDLMHTYAA 217

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           +  +    + LP   P+   G       A   +IV+E          T G+G  I     
Sbjct: 218 SYGQTLVKLRLPTALPFLFNGLKICTTLALIGAIVAEFFGS-----PTVGMGFRIKIEVG 272

Query: 549 KGSFPEVVLGVLIMCCFV---LALNRFLWHPLYLY--GTRCLR 586
           + +   V   + +          L   L   L  +    R LR
Sbjct: 273 RLAMDMVWAEITVAALAGSGLYGLMALLERRLTFWHPSQRRLR 315



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 88/265 (33%), Gaps = 26/265 (9%)

Query: 19  IFDLLAFVLVIGI-------INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
            +   A  L +G        + + ++ I    +P           +   L     +T LR
Sbjct: 62  RWVGAALPLALGATILGVWEMAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTILR 121

Query: 72  -MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
             L   V+      + A    +S  L   L+P+ + + ++PI+G     V+++      K
Sbjct: 122 GALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAALPIVGTAPILVMWYGFGPSSK 181

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           V        F         M  +  Q L        ++  ++  S  Q    L +P ++P
Sbjct: 182 VAVVVAMVFF--------PMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALP 233

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL----AILYAML 246
            L   + +  +      + +E         P  G+G  I + +    +      I  A L
Sbjct: 234 FLFNGLKICTTLALIGAIVAEFFGS-----PTVGMGFRIKIEVGRLAMDMVWAEITVAAL 288

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271
              G+  L   LL R +  W    R
Sbjct: 289 AGSGLYGLMA-LLERRLTFWHPSQR 312


>gi|56696823|ref|YP_167185.1| phosphate ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
 gi|56678560|gb|AAV95226.1| phosphate ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
          Length = 450

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  +V++L      +      A    L  V+   +  + ++P + F    +  F+
Sbjct: 230 SLFMMLVVLVLALPIGVAASIYLEEFAPKNWLTDVIEVNISNLAAVPSIVFGILGLAVFI 289

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N      + A L     +    +  +  S   SL ++P  + + +     S  Q  ++  
Sbjct: 290 NYM-HLPMSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQAVFHHV 348

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 349 LPLAAPGILTGTIIGLAQA 367



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++  ++ +P+G+              ++  I+     LAA P+ VF  
Sbjct: 223 MGVSMVGSLFMMLVVLVLALPIGVAASIYLEEFAPKNWLTDVIEVNISNLAAVPSIVFGI 282

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +  ++  L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 283 LGLAVFINYMHLPMSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 342

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 343 AVFHHVLPLAAPGILTGTIIGLAQA 367


>gi|116750312|ref|YP_846999.1| phosphate ABC transporter inner membrane subunit PstC
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699376|gb|ABK18564.1| phosphate ABC transporter, inner membrane subunit PstC
           [Syntrophobacter fumaroxidans MPOB]
          Length = 297

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 14/222 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
            R         L ++  +  +  I  F  V G  I       G++     Y       + 
Sbjct: 7   TRERLIRLIFLLTASISILVLSTIVLFLFVEGAPILGKVSLTGFLFGREWYPTSSPPDFG 66

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANV---- 432
               +   + +  ++++I IP+G+             +    +P  +LLAA P+ V    
Sbjct: 67  ILPLLVASLAVTSLSALIAIPLGVMTAVYLAEIASARVREIAKPVFELLAALPSVVIGFF 126

Query: 433 ----FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
                 P +               SL++ F +   I         + P D KE + +   
Sbjct: 127 GMVVVAPFLQDTFDIATGLNLFNASLMLAFMSVPTICSISEDAVHSVPKDLKEASLALGA 186

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
           T       +I+P       T  I     A   ++V  + + G
Sbjct: 187 THMETILRVIVPASLSGISTAVILGMSRAIGETMVVLMVAGG 228



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 66/163 (40%), Gaps = 10/163 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTV 120
            +  L+   +S L       + A       S R+  +  P+ +++ ++P  ++GF    V
Sbjct: 71  LVASLAVTSLSALIAIPLGVMTAVYLAEIASARVREIAKPVFELLAALPSVVIGFFGMVV 130

Query: 121 VY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQ 178
           V  F+        G  L     +          S+   ++ ++P+DL+E S +   +  +
Sbjct: 131 VAPFLQDTFDIATGLNLFNASLMLAFMSVPTICSISEDAVHSVPKDLKEASLALGATHME 190

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
               + VP S+ G+   +++ MS      +   M+  G  +IP
Sbjct: 191 TILRVIVPASLSGISTAVILGMSRAIGETMVVLMVAGGAAMIP 233


>gi|229587802|ref|YP_002869921.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229359668|emb|CAY46516.1| putative amino acid ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 214

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L Q A  T L +  + +I+LL     A     S          L  VL   +++ +SIP 
Sbjct: 6   LVQGAIDTLLMIGVSSLIALLVGIPLAVFLVTSDKGGIYQAPALNRVLGAFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  L  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRLIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P ++PG+V    +++
Sbjct: 124 GCRRWHIIWHVLLPEALPGIVGGFTITL 151



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T+  + V  +IA ++ IP+ +++           P ++  +  F  L  + P  +    L
Sbjct: 13  TLLMIGVSSLIALLVGIPLAVFLVTSDKGGIYQAPALNRVLGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIIW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G    ++       ++
Sbjct: 133 HVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDT-------QI 185

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L V+++   ++A+ +     L     + 
Sbjct: 186 MLTVIVLLVILVAVIQLGGDRLARVLNKR 214


>gi|228916903|ref|ZP_04080465.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929314|ref|ZP_04092339.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935590|ref|ZP_04098406.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229093339|ref|ZP_04224448.1| ABC transporter permease protein [Bacillus cereus Rock3-42]
 gi|229123808|ref|ZP_04253002.1| ABC transporter permease protein [Bacillus cereus 95/8201]
 gi|229186511|ref|ZP_04313673.1| ABC transporter permease protein [Bacillus cereus BGSC 6E1]
 gi|228596942|gb|EEK54600.1| ABC transporter permease protein [Bacillus cereus BGSC 6E1]
 gi|228659629|gb|EEL15275.1| ABC transporter permease protein [Bacillus cereus 95/8201]
 gi|228690063|gb|EEL43862.1| ABC transporter permease protein [Bacillus cereus Rock3-42]
 gi|228824128|gb|EEM69944.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830328|gb|EEM75940.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842727|gb|EEM87813.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 286

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 9   ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 68

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 69  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 128

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 129 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKW 186

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 187 QTMYRIVLPYAFPGIITGCTLAISRA 212



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + PN   
Sbjct: 116 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLL 175

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 176 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 212


>gi|262197755|ref|YP_003268964.1| phosphate ABC transporter inner membrane subunit PstA [Haliangium
           ochraceum DSM 14365]
 gi|262081102|gb|ACY17071.1| phosphate ABC transporter, inner membrane subunit PstA [Haliangium
           ochraceum DSM 14365]
          Length = 294

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 9/135 (6%)

Query: 76  MVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           + ++ LF       AA          RL   +   +  +  +P + +    +  F+  + 
Sbjct: 83  IALTALFALPLGVGAAIYLEEYGGQSRLASTIEVAIANLAGVPSVIYGLLGLGLFVRAFG 142

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A   A+    +  M  S  ++L  +P  L E +     + WQ    + +P  
Sbjct: 143 FGPSLLAGACTLALLVLPIVIM--SSREALRTVPDSLREGALGLGATRWQMIRRVILPMC 200

Query: 189 MPGLVWNMMMSMSGG 203
           +PG++   ++S+S  
Sbjct: 201 LPGILTGAILSVSRA 215



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 9/140 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWI-------GFRPHISSKIQPFAQLLAAFPANVF--FPLV 437
           +F  V LI + ++  +P+G+         G +  ++S I+     LA  P+ ++    L 
Sbjct: 76  LFGSVYLIALTALFALPLGVGAAIYLEEYGGQSRLASTIEVAIANLAGVPSVIYGLLGLG 135

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   ++      L  +  +       ++ +        P+  +E A     T W+  R +
Sbjct: 136 LFVRAFGFGPSLLAGACTLALLVLPIVIMSSREALRTVPDSLREGALGLGATRWQMIRRV 195

Query: 498 ILPGIFPYYVTGAITACGGA 517
           ILP   P  +TGAI +   A
Sbjct: 196 ILPMCLPGILTGAILSVSRA 215


>gi|261349579|ref|ZP_05974996.1| phosphate ABC transporter, permease protein PstA
           [Methanobrevibacter smithii DSM 2374]
 gi|288861537|gb|EFC93835.1| phosphate ABC transporter, permease protein PstA
           [Methanobrevibacter smithii DSM 2374]
          Length = 282

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 8/206 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY---VIWLGCITMFRVVVLIII 396
           +S ++ +     + G  +    Q I +     +  D      +  +   +++ V +  II
Sbjct: 20  LSGVITLLILVTILGYILVKGLQVINFEFLFLSPIDAGREGGIFPMIISSIYVVFIAAII 79

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWL 452
           A+ + +   I++        +   I+  ++ LA+ P+ VF    ++    +  L   +  
Sbjct: 80  ATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILS 139

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++       +F V     S+ PN +KE       T W+    +ILP   P  +TG I
Sbjct: 140 GGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVI 199

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            A   A + +     A    I +  +
Sbjct: 200 LAMTRAISEAAAVMYAVGSAITVPVS 225



 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 9/218 (4%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQY 64
            P  S++I   +F L   + ++ ++ IL + + +     +   +    +D      +   
Sbjct: 6   SPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLQVINFEFLFLSPIDAGREGGIFPM 65

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   +  A +I+       A      A ++++   +    + + SIP + F  F + 
Sbjct: 66  IISSIYVVFIAAIIATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLA 125

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+     K+    L+    +    +  +      +L +IP   +E       + WQ  +
Sbjct: 126 FFVVFL--KLGWCILSGGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIY 183

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            + +P ++PG++  ++++M+       A+ M  VG  +
Sbjct: 184 SVILPAALPGIITGVILAMTRA-ISEAAAVMYAVGSAI 220


>gi|213965980|ref|ZP_03394170.1| ABC phosphonate transporter, fused membrane subunit
           [Corynebacterium amycolatum SK46]
 gi|213951394|gb|EEB62786.1| ABC phosphonate transporter, fused membrane subunit
           [Corynebacterium amycolatum SK46]
          Length = 567

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 67/540 (12%), Positives = 167/540 (30%), Gaps = 46/540 (8%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90
           IN++            +  + P+       L      T   +  A  +S++ +   A LA
Sbjct: 46  INLVTISESADNAANFVARMFPLEFPPMAELLSLIGETLAIVFLATALSVILSVPLAVLA 105

Query: 91  AK----SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
           A+    S     +   ++ + ++IP L      +  F     G ++   + ++  +    
Sbjct: 106 ARTTTFSPTARWISRALIVLARAIPDLVLAIVFIRMFGIGAIGGILAMGIHSVGMVAKL- 164

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                     ++  +     E   S   S  Q      +  ++P  +   +++ +   F 
Sbjct: 165 -------YADAIEELDDGPREAIESVGGSRTQ-----QIVSAIPQALTPQLIATALHRFD 212

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +     +++G   + + GIG  IA +++  +    +   L +L +  + + L      + 
Sbjct: 213 INLRTSVLLG--YVGVGGIGMAIADSLRTLNYREGMALALVVLLLCIVMELLSGSLRAII 270

Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFH 326
             K      +G +    W   +  K    +          +P      ++ R L  I   
Sbjct: 271 MRKSDSSLLSGTWVDRMWGTKIEDKRKAAKQGATDGKPSINP-PWTAARVSRVLTTIALV 329

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386
                    +    S               +    +++   +   +      +  L   T
Sbjct: 330 VITIAAFAETEISASNFF----------TGLANLPETMALFLPPSSGGIAGEIFQLLLDT 379

Query: 387 MFRVVVLIIIASIIWIPVGIW----IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           +        + +I+ IP+GI     +     +    +    ++   P  +   L +  V 
Sbjct: 380 LQIAFAATFLGAILAIPIGIMAASNVVANKWVHGFFRVLIVVIRGIPELI---LAIIFVV 436

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
              L P +  +L +  G    +   V         D +E   +   T  + +    +   
Sbjct: 437 ISGLGP-VAGTLALALGAVGLLSKLVADSLEETDTDVQEALRTTGATESQIFFAATVRQA 495

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
            P ++   +        ++ +  V   G       G+G  +  ++    F  V   +++M
Sbjct: 496 IPSFIAHCLYLLDTNIRSATLLGVVGAG-------GIGFQLLNASRVNQFDVVTYILILM 548


>gi|118479443|ref|YP_896594.1| phosphate ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|196034910|ref|ZP_03102317.1| phosphate ABC transporter, permease protein [Bacillus cereus W]
 gi|196041613|ref|ZP_03108905.1| phosphate ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196046335|ref|ZP_03113561.1| phosphate ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218905406|ref|YP_002453240.1| phosphate ABC transporter, permease protein [Bacillus cereus AH820]
 gi|225866252|ref|YP_002751630.1| phosphate ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|301055764|ref|YP_003793975.1| phosphate ABC transporter permease [Bacillus anthracis CI]
 gi|118418668|gb|ABK87087.1| phosphate ABC transporter membrane protein 2, PhoT family [Bacillus
           thuringiensis str. Al Hakam]
 gi|195992449|gb|EDX56410.1| phosphate ABC transporter, permease protein [Bacillus cereus W]
 gi|196022805|gb|EDX61486.1| phosphate ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|196027601|gb|EDX66216.1| phosphate ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|218537517|gb|ACK89915.1| phosphate ABC transporter, permease protein [Bacillus cereus AH820]
 gi|225789101|gb|ACO29318.1| phosphate ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|300377933|gb|ADK06837.1| phosphate ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 288

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYRIVLPYAFPGIITGCTLAISRA 214



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + PN   
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 214


>gi|89072989|ref|ZP_01159536.1| putative phosphate ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051207|gb|EAR56663.1| putative phosphate ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 303

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 81/216 (37%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---QYASRTTLR 71
            F N+F L A + ++ ++ I     +E         +  I L    LP      +   + 
Sbjct: 28  FFKNLFMLSAAIGILSLVTIGYFIFREGYAAFAQAGVAGIVLGTDWLPPALYGIAPMIVA 87

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
            L +   +++       L A        +RL  ++ P+++++  IP + +    L   V 
Sbjct: 88  SLVSTAGAVVLGVPIGVLTAIFIAEVAPKRLADLIRPMIELLAGIPSVVYGFFGLVIIVP 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++        LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 148 LIQEVFNVPAGNTILAGIIVLSVMILPTVITVSETSIRAVPRAYKEGSLALGASSMFTIF 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L VP +  G++  +++ ++      +A  M++   
Sbjct: 208 KLLVPAARSGIMTGVILGVARALGETMAIIMVMGNS 243



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 11/228 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-VIW 381
            R  F +N   L +   +  ++ I +F    G A        G ++        LY +  
Sbjct: 24  WREIFFKNLFMLSAAIGILSLVTIGYFIFREGYAAFAQAGVAGIVLGTDWLPPALYGIAP 83

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVF------ 433
           +   ++      +++   I +   I+I       ++  I+P  +LLA  P+ V+      
Sbjct: 84  MIVASLVSTAGAVVLGVPIGVLTAIFIAEVAPKRLADLIRPMIELLAGIPSVVYGFFGLV 143

Query: 434 --FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL+    +    N  L   +++       ++        A P  +KE + +   +  
Sbjct: 144 IIVPLIQEVFNVPAGNTILAGIIVLSVMILPTVITVSETSIRAVPRAYKEGSLALGASSM 203

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
                +++P      +TG I     A   ++   +       +    L
Sbjct: 204 FTIFKLLVPAARSGIMTGVILGVARALGETMAIIMVMGNSPAMPEGLL 251


>gi|30264342|ref|NP_846719.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47529789|ref|YP_021138.1| phosphate ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187169|ref|YP_030421.1| phosphate ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|65321647|ref|ZP_00394606.1| COG0581: ABC-type phosphate transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|165872041|ref|ZP_02216681.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167634660|ref|ZP_02392980.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167638514|ref|ZP_02396790.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170687348|ref|ZP_02878565.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170707450|ref|ZP_02897904.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177655054|ref|ZP_02936720.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190566042|ref|ZP_03018961.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817046|ref|YP_002817055.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229600784|ref|YP_002868560.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254684029|ref|ZP_05147889.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254736378|ref|ZP_05194084.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254741415|ref|ZP_05199102.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254753948|ref|ZP_05205983.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254757820|ref|ZP_05209847.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|30258987|gb|AAP28205.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47504937|gb|AAT33613.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49181096|gb|AAT56472.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|164712172|gb|EDR17709.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167513362|gb|EDR88732.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167530112|gb|EDR92847.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170127694|gb|EDS96567.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170668543|gb|EDT19289.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172080315|gb|EDT65404.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190562961|gb|EDV16927.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006489|gb|ACP16232.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229265192|gb|ACQ46829.1| phosphate ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 288

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYMAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 131 LGLTLFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYRIVLPYAFPGIITGCTLAISRA 214



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + PN   
Sbjct: 118 QTLAGVPSVVFGLLGLTLFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 214


>gi|299770488|ref|YP_003732514.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           sp. DR1]
 gi|298700576|gb|ADI91141.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           sp. DR1]
          Length = 219

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 78/203 (38%), Gaps = 16/203 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTVDTLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             +  Q  W++ +P ++PG+V    +++      ++ S  I        L  I       
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI----VTMINSSAIAGAIGAGGLGDIAYR--YG 180

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
            +  D+  +L  +  ++ ++ L 
Sbjct: 181 YQRFDMQIMLAVIFVLIVLVMLV 203



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 16/194 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQALGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G       ++     +
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGY------QRFDMQIM 189

Query: 556 VLGVLIMCCFVLAL 569
           +  + ++   V+ +
Sbjct: 190 LAVIFVLIVLVMLV 203


>gi|255010350|ref|ZP_05282476.1| phosphate transport system permease protein [Bacteroides fragilis
           3_1_12]
 gi|313148150|ref|ZP_07810343.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136917|gb|EFR54277.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 291

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 67/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +++  I+  +++          +       +    +      T   M  + + +  
Sbjct: 26  LCIVLILFAILGFIIYKGIGVISWDFLTSAPTDGMTGGGIWPAIVGTFYLMTGSALFAFP 85

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A   +L   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 86  VGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SILAG 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  +  +  ++L  IP  + E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 144 SLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLIL 203

Query: 199 SMS 201
           ++ 
Sbjct: 204 ALG 206



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  GI   S  ++ +  T       IW   +  F ++     +++   
Sbjct: 28  IVLILFAILGFIIYKGIGVISWDFLTSAPTDGMTGGGIWPAIVGTFYLMTG---SALFAF 84

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
           PVG+  G           +   I+     L+  P+ VF    ++    Y    +  L+  
Sbjct: 85  PVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGDSILAGS 144

Query: 456 MIFG--TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +  G      ++        A P+  +E + +   T  +   ++ILP   P  +TG I A
Sbjct: 145 LTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLILA 204

Query: 514 CG 515
            G
Sbjct: 205 LG 206


>gi|227537259|ref|ZP_03967308.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242974|gb|EEI92989.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 217

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +   +T +   ++     L       L          +++ +  +   I++I +SIP 
Sbjct: 9   LLEGTWQTLVMTFASGFFGFLLGLPTGILLFVTRKGQIMENKTIHQITSVIVNIFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AA+  +       +   +  SL  IP  L E +R+ 
Sbjct: 68  FIILIVWMIPFTRELVGTSIGVS-AALVPLSIGAAPFVARLVENSLLEIPAGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P S+P +V N  +++
Sbjct: 127 GATHKQIILKVLLPESLPSMVNNATITL 154



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 38/142 (26%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPAN---VFF 434
           T+           ++ +P GI         I     I         +  + P     V+ 
Sbjct: 16  TLVMTFASGFFGFLLGLPTGILLFVTRKGQIMENKTIHQITSVIVNIFRSIPFIILIVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +  +  L  L I G   ++   V       P    E A +   T  +  
Sbjct: 76  IPFTRELVGTSIGVSAALVPLSI-GAAPFVARLVENSLLEIPAGLIEAARAMGATHKQII 134

Query: 495 RYIILPGIFPYYVTGAITACGG 516
             ++LP   P  V  A      
Sbjct: 135 LKVLLPESLPSMVNNATITLIT 156


>gi|163795111|ref|ZP_02189079.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
 gi|159179509|gb|EDP64038.1| binding-protein-dependent transport systems inner membrane
           component [alpha proteobacterium BAL199]
          Length = 391

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 24/173 (13%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--------ILGFL- 116
             T +  L   +++ L  +  A   A SR    V + +L ++  IP        I  ++ 
Sbjct: 167 LSTLMYALCVTILAFLACYPVAYAVATSRSSERVALLMLGLV--IPYAINELLRIFSWIM 224

Query: 117 -------------TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
                        +  ++        + + +  A    +  + +  M F +Y ++  + R
Sbjct: 225 ILEKHGVLNRLLDSLGLIDLAAGEGMRFVASNGAVFAVMVYAYILFMVFPIYNTIETLDR 284

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           +  E +R    S W+  W + +P + PG+    +M+       + A E++  G
Sbjct: 285 NQIEAARDLGASTWRIHWRVVLPHAKPGIAVGAVMTFMLSAGSIAAPEIVGRG 337



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 463 YILFNV---IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           YILF V            +  E A     + WR    ++LP   P    GA+     +  
Sbjct: 267 YILFMVFPIYNTIETLDRNQIEAARDLGASTWRIHWRVVLPHAKPGIAVGAVMTFMLSAG 326

Query: 520 ASIVSEVASWG 530
           +    E+   G
Sbjct: 327 SIAAPEIVGRG 337


>gi|323697578|ref|ZP_08109490.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457510|gb|EGB13375.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 587

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/419 (12%), Positives = 125/419 (29%), Gaps = 44/419 (10%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M   +   + +IP+ L E + S  L+  Q    + +P +   ++  +             
Sbjct: 152 MAEIIRAGIQSIPKGLLEAAYSSGLTFPQTLRKVILPLAFREIIPPLGSEFLNNMKNTSL 211

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  I V +    +  + S      +   +  ++Y  L++     LY           + +
Sbjct: 212 AMTIGVTELCWSMTEVYSLTYRTFEAFSVATVVYLGLSLSIAGILYIV---------NER 262

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
            ++     I P              +  + +  ++F       V    R     R   P 
Sbjct: 263 LKIMPRDRITPL-----------RRVADVLFWPFDFLGRKLEYVFWYFRKSPDQRTVSPL 311

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-------- 381
                   ++    L I +   +  V   IA   + +            +IW        
Sbjct: 312 RGALRQLARQCILALKILFVAALAYVLYKIAVALVHFNWAIIGANLKTLLIWRFPNGDET 371

Query: 382 ---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF-----AQLLAAFP---A 430
               G   +   +++  I+      +G+ +G      +++         +L+   P    
Sbjct: 372 EFCYGLGGLAGSLLMAAISITGSFFIGLVVGMGRTAHNRVFRIPCLLYIELIRGVPLILV 431

Query: 431 NVFFPLVVSCVSYYHLNPNLW---LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            ++F   +    +       W   +++   FG   YI   V  G    P    E A +  
Sbjct: 432 ILWFYQAILEFVFKVDVQAFWAATIAMTFFFGA--YIAETVRGGIENIPPGQVEAAKASG 489

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
           +T  +  R I+LP      +   +     A+  + ++ +     +      +   I   
Sbjct: 490 LTYLQTMRKIVLPQALKQMLPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVY 548


>gi|322833212|ref|YP_004213239.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168413|gb|ADW74112.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 317

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 83/230 (36%), Gaps = 20/230 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++        +  +I + + +T D   +  Y  ++      + ++ LL  +  A   A S
Sbjct: 69  LVTWSDGMLDIALNIANYIGLTQDPLYIDAY-LQSLQVAAISTLLCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTF---------TVVYF-MNLYPGKVIGAELAA 138
           R     ++ +L I+ S     I +  ++            +++  +   P  ++   LA 
Sbjct: 128 RTSTRNILLLLVILPSWTSFLIRVYAWMGILKDNGVLNNVLIWLHVIDQPLVILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  S +  M   +Y +L  +   L E ++       + F+ + +P +  G++   M+
Sbjct: 188 YIGIVYSYLPFMVLPIYTALTRMDYSLVEAAQDLGARPMKTFFKVIMPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
                    V  E++   D+ +    IG  +           +  A+  +
Sbjct: 248 VFIPAVGEYVIPELLGGPDSNM----IGRVLWQEFFNNRDWPVASAVAVV 293



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 64/215 (29%), Gaps = 23/215 (10%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I N+         I     ++    +  ++  +I  P+   +      +  I     +L 
Sbjct: 83  IANYIGLTQDPLYIDAYLQSLQVAAISTLLCLLIGYPLAWAVAHSRTSTRNILLLLVILP 142

Query: 427 A-------------------FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +                      NV   L V       L+ NL + + +++    +++  
Sbjct: 143 SWTSFLIRVYAWMGILKDNGVLNNVLIWLHVIDQPLVILHTNLAVYIGIVYSYLPFMVLP 202

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           +    +       E A        + +  +I+P      + G++     A    ++ E+ 
Sbjct: 203 IYTALTRMDYSLVEAAQDLGARPMKTFFKVIMPLTKGGIIAGSMLVFIPAVGEYVIPELL 262

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
                ++    +G  + +         V   V ++
Sbjct: 263 GGPDSNM----IGRVLWQEFFNNRDWPVASAVAVV 293


>gi|312883055|ref|ZP_07742786.1| phosphate ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309369215|gb|EFP96736.1| phosphate ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 309

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 77/206 (37%), Gaps = 13/206 (6%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QYASRTTLRMLSAM 76
           A + ++ +  I    I+E+        I  I L    LP            + +  L A+
Sbjct: 43  AIIGIVSLAVIAYFIIKESIPAFQEAGISGIVLGQDWLPPALYGVATMIVASLVSTLGAV 102

Query: 77  VISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGK 130
           ++ +    + A   A+   + +  V+ P ++++  IP + +    L   V     ++   
Sbjct: 103 LVGVPIGVLTAIYIAELAPKSIANVIRPAVELLAGIPSVVYGFFGLIIIVPLIQEIFSVP 162

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
                LA I  +    +  +      S+  +P+  +E S +   S     + L VP +  
Sbjct: 163 AGNTILAGIIVLGVMILPTVITVSETSIRAVPKSYKEGSLALGASKIYTIFQLLVPAARS 222

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216
           G++  +++ +       +A  M++  
Sbjct: 223 GIMTGVILGIGRALGETMAIIMVMGN 248



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 81/239 (33%), Gaps = 17/239 (7%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--GYIVNH 370
           ++ L +T    +           +    S ++ I    V+    I  +  +     I   
Sbjct: 14  IRPLAKTSLREKKRVDWQEKAFHALFLTSAIIGIVSLAVIAYFIIKESIPAFQEAGISGI 73

Query: 371 FTYQDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQ 423
              QD L     G  TM    +V  + A ++ +P+G+             I++ I+P  +
Sbjct: 74  VLGQDWLPPALYGVATMIVASLVSTLGAVLVGVPIGVLTAIYIAELAPKSIANVIRPAVE 133

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           LLA  P+ V+         PL+    S    N  L   +++       ++        A 
Sbjct: 134 LLAGIPSVVYGFFGLIIIVPLIQEIFSVPAGNTILAGIIVLGVMILPTVITVSETSIRAV 193

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           P  +KE + +   +       +++P      +TG I   G A   ++   +       +
Sbjct: 194 PKSYKEGSLALGASKIYTIFQLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAM 252


>gi|209551194|ref|YP_002283111.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536950|gb|ACI56885.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 287

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 90/240 (37%), Gaps = 10/240 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSAMVISL 80
                  I ++     G + +  P        ++ D ++L         R M++++ +S+
Sbjct: 29  FFLAPFAITLLASFRQGTEASLPPLPPWPTSGVSFDAYALLDTFGAGIWRHMINSLFVSV 88

Query: 81  ---LFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
              L T   + LA    SR    +   +  ++ +  ++ F +     F+ L    +  + 
Sbjct: 89  ATVLLTVTVSLLAGYGFSRYRFPMKNALFVLIIATLMIPFQSILTPLFIILAKLGLNNSL 148

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L       T Q+    F M  +   +P+++EE +R       +    + +P  +PG+   
Sbjct: 149 LGLTLVYVTLQLPFSVFMMRNAFDAVPKEIEEAARIDGARDLRLLARVLLPLVLPGVATV 208

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            + +    W   +A+ +++  +    LP     +  A++   L AI +  +    V+   
Sbjct: 209 AIFAFLNAWNEFLAALVLLSSNEKYTLP----VLMTAVRAGRLGAINWGAVQAGVVVMTI 264



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 6/207 (2%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           +++ F      ++I    +++  V++ + ++ +     G      P  ++        L 
Sbjct: 68  LLDTFGAGIWRHMINSLFVSVATVLLTVTVSLLAG--YGFSRYRFPMKNALFVLIIATLM 125

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
               ++  PL +        N  L L+L+ +     + +F +     A P + +E A   
Sbjct: 126 IPFQSILTPLFIILAKLGLNNSLLGLTLVYVTLQLPFSVFMMRNAFDAVPKEIEEAARID 185

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
                R    ++LP + P   T AI A   AWN  + + V    +       L   +   
Sbjct: 186 GARDLRLLARVLLPLVLPGVATVAIFAFLNAWNEFLAALVLLSSNEKYTLPVLMTAVRAG 245

Query: 547 T-EKGSFPEVVLGVLIM---CCFVLAL 569
                ++  V  GV++M   C  V  L
Sbjct: 246 RLGAINWGAVQAGVVVMTIPCLIVFLL 272


>gi|27467987|ref|NP_764624.1| phosphate ABC transporter [Staphylococcus epidermidis ATCC 12228]
 gi|57866924|ref|YP_188537.1| phosphate ABC transporter permease [Staphylococcus epidermidis
           RP62A]
 gi|242242666|ref|ZP_04797111.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|251810817|ref|ZP_04825290.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876175|ref|ZP_06285042.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis SK135]
 gi|293366648|ref|ZP_06613325.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315532|gb|AAO04666.1|AE016747_163 phosphate ABC transporter [Staphylococcus epidermidis ATCC 12228]
 gi|57637582|gb|AAW54370.1| phosphate ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|242233802|gb|EES36114.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|251805652|gb|EES58309.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295200|gb|EFA87727.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis SK135]
 gi|291319417|gb|EFE59786.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|319401327|gb|EFV89538.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis FRI909]
 gi|329729368|gb|EGG65774.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis VCU144]
 gi|329732921|gb|EGG69266.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis VCU028]
 gi|329736959|gb|EGG73217.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           epidermidis VCU045]
          Length = 308

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 79/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +        AA       S R   ++ PIL+I+  IP + F    LTF      N
Sbjct: 92  TVIATIVAVPIGLGAAIYLNEYASDRSRRIIKPILEILAGIPTIVFGFFALTFVTPILRN 151

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           L P       ++    +    V  +T     ++ ++P  + E +     + ++    + +
Sbjct: 152 LIPNLGEFNSISPGIVVGIMIVPMITSMSEDAMSSVPDKIREGAFGLGATKFEVATKVVL 211

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIALAIKEQDL 238
           P +  G+V ++++ +S      +   +         L          G  + +A  +   
Sbjct: 212 PAATSGVVASIVLGISRAIGETMIVSLAAGSSPTSSLSLTSSIQTMTGYIVEIATGDAAF 271

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 272 GSDIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 308



 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 21/214 (9%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA+I+ +P+G+                 I+P  ++LA  P  VF         P++ +
Sbjct: 92  TVIATIVAVPIGLGAAIYLNEYASDRSRRIIKPILEILAGIPTIVFGFFALTFVTPILRN 151

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +       ++   +++       I        S+ P+  +E A     T +     ++L
Sbjct: 152 LIPNLGEFNSISPGIVVGIMIVPMITSMSEDAMSSVPDKIREGAFGLGATKFEVATKVVL 211

Query: 500 PGI----FPYYVTGAITACGGAWNASIVS---EVASWGHIHLRTTGLGAYIAESTEKGSF 552
           P          V G   A G     S+ +     +S        T  G  +  +T   +F
Sbjct: 212 PAATSGVVASIVLGISRAIGETMIVSLAAGSSPTSSLSLTSSIQTMTGYIVEIATGDAAF 271

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              +   +    F L +   + + L  + ++  R
Sbjct: 272 GSDIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 305


>gi|15615554|ref|NP_243858.1| phosphate ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10175614|dbj|BAB06711.1| phosphate ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 294

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +   V++  +I  +L           +        +   +      T   ML    +++ 
Sbjct: 32  IFGLVVLAVLIARVLADGASWINLDFLTGRHSSDPEKAGIMGALLGTLWLMLVVTPVTMF 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK  RL   +   +  +  +P + F    +  F+      +    LA 
Sbjct: 92  LGVGTAIYLECYAKKGRLQSFIETNISNLAGVPSIVFGILGLTVFVRTMD--LGSVVLAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +++  IP  L E S     + WQ    + +P ++PG++   ++
Sbjct: 150 GLTMSLLVLPIVVVASQEAIRAIPSHLSEASFGLGATKWQTIKNIILPAALPGILTGAIL 209

Query: 199 SMSGG 203
           S+S  
Sbjct: 210 SLSRA 214



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 6/205 (2%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
             + L +    +   +A G +W ++ ++   H +  +   ++     T++ ++V+  +  
Sbjct: 31  TIFGLVVLAVLIARVLADGASWINLDFLTGRHSSDPEKAGIMGALLGTLWLMLVVTPVTM 90

Query: 399 IIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-- 453
            + +   I++     +  + S I+     LA  P+ VF  L ++         ++ L+  
Sbjct: 91  FLGVGTAIYLECYAKKGRLQSFIETNISNLAGVPSIVFGILGLTVFVRTMDLGSVVLAGG 150

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L M       ++        A P+   E +     T W+  + IILP   P  +TGAI +
Sbjct: 151 LTMSLLVLPIVVVASQEAIRAIPSHLSEASFGLGATKWQTIKNIILPAALPGILTGAILS 210

Query: 514 CGGAWNASIVSEVASWGHIHLRTTG 538
              A   +    V     + +   G
Sbjct: 211 LSRAIGETAPLIVLGIPALLIPFPG 235


>gi|83942437|ref|ZP_00954898.1| phosphate ABC transporter, permease protein [Sulfitobacter sp.
           EE-36]
 gi|83846530|gb|EAP84406.1| phosphate ABC transporter, permease protein [Sulfitobacter sp.
           EE-36]
          Length = 446

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 52/142 (36%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  + ++L      +      A    L  ++   +  + ++P + F    + 
Sbjct: 223 MLGSLFMMLVVLALALPIGVAASIYLEEFAPKNLLTDIIEVNISNLAAVPSIVFGILGLA 282

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N        A L     +    +  +  S   SL ++P  + + +     S  Q  +
Sbjct: 283 VFINYM-HLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQSVF 341

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 342 HHVLPLAAPGILTGTIIGLAQA 363



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 78/214 (36%), Gaps = 26/214 (12%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              ++  I+     LAA P+ VF  
Sbjct: 219 MGVSMLGSLFMMLVVLALALPIGVAASIYLEEFAPKNLLTDIIEVNISNLAAVPSIVFGI 278

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    Y   PN   L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 279 LGLAVFINYMHLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 338

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN------ASIVSEVASWGHIHLRTTGLG------ 540
              + +LP   P  +TG I     A           +    +        +GL       
Sbjct: 339 SVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNPPDGIASGLMDPNSAM 398

Query: 541 -AYIAESTEKGS---FPEVVLGVLIMCCFVLALN 570
            A I E  ++     +     G++I+  F++ +N
Sbjct: 399 PAQIYEWAKRADPAFYERAWGGIIILLVFLITMN 432


>gi|152965260|ref|YP_001361044.1| ABC transporter permease [Kineococcus radiotolerans SRS30216]
 gi|151359777|gb|ABS02780.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 251

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+P            ++ +  L  F    L   + +   + +   +  +S         
Sbjct: 19  GSIPHLLVSHLGYTAISVAVGFLIAFPIGLLIGHTGKGSFLAINAGNAGRS--------L 70

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  ++L    +    +  + A+    +  +  S Y  L ++ R+  + +R   ++  Q
Sbjct: 71  PTLGLLSLLVTLMGLGFVPVLIALVVLVIPPILTSTYAGLRSVDRNAVDAARGMGMTSSQ 130

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P ++P +   +  ++      VVA+  +      + L G+G  +   +   D 
Sbjct: 131 VLFRVELPMALPVVFGGVRAAV----LQVVATATVAA---YVGLSGLGRLLVDGLAVNDY 183

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             ++   + +  +  + D LL
Sbjct: 184 GRVVAGAVVVAALAIVLDLLL 204



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 11/205 (5%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428
            H+ +     +  L    +    + + +  +I  P+G+ IG     S           + 
Sbjct: 11  AHWDWGTTGSIPHLLVSHLGYTAISVAVGFLIAFPIGLLIGHTGKGSFLAINAGNAGRSL 70

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
           P      L+V+ +    +   + L +L+I      IL +  AG  +   +  + A    +
Sbjct: 71  PTLGLLSLLVTLMGLGFVPVLIALVVLVI----PPILTSTYAGLRSVDRNAVDAARGMGM 126

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548
           T  +    + LP   P    G   A        + +   +    ++  +GLG  + +   
Sbjct: 127 TSSQVLFRVELPMALPVVFGGVRAAV----LQVVATATVA---AYVGLSGLGRLLVDGLA 179

Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573
              +  VV G +++    + L+  L
Sbjct: 180 VNDYGRVVAGAVVVAALAIVLDLLL 204


>gi|295425592|ref|ZP_06818279.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
 gi|295064608|gb|EFG55529.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
          Length = 297

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
               +  +++ GI+  +L           +            +      +   ++   +I
Sbjct: 16  WLVAIVVLILAGILGNILWTGLPHLSWHFLTSEASSYQAGGGVRDQLFNSIYLLILTTII 75

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S       A      A       ++   ++I+ S+P +    F  + F+  +        
Sbjct: 76  SFPIALGAAIYLSEYASDNWFTSLIRTTIEILSSLPSIVVGLFGYLLFVVQFGLGFSIIS 135

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A     F   +  +T +M Q++  +P+   E   +  LS W+    + +P ++PG++  
Sbjct: 136 GALALTFFNLPI--LTSNMEQAINGVPQSQREAGLALGLSNWKTIRGIVLPAALPGILTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 LILSAG 199



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 21/196 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIA 397
           V Y L      ++ G+   I W  + ++  HF   +       G +   +F  + L+I+ 
Sbjct: 13  VIYWLVAIVVLILAGILGNILWTGLPHLSWHFLTSEASSYQAGGGVRDQLFNSIYLLILT 72

Query: 398 SIIWIP--VGIWIGFRP-----HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +II  P  +G  I           +S I+   ++L++ P+     +VV    Y       
Sbjct: 73  TIISFPIALGAAIYLSEYASDNWFTSLIRTTIEILSSLPS-----IVVGLFGYLLFVVQF 127

Query: 451 WLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            L   +I G      FN       +    +  P   +E   +  ++ W+  R I+LP   
Sbjct: 128 GLGFSIISGALALTFFNLPILTSNMEQAINGVPQSQREAGLALGLSNWKTIRGIVLPAAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I + G  + 
Sbjct: 188 PGILTGLILSAGRIFG 203


>gi|242373682|ref|ZP_04819256.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242348650|gb|EES40252.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 301

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           AK      ++   +  +  +P + F       F+      +  + LAA   +    +  +
Sbjct: 113 AKDNIFTSIVKISISNLAGVPSIVFGLLGYTLFVGA--AGMGNSVLAAALTMSLLILPVI 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             S  +++  +P  + E S     + WQ    + +P ++PG++   ++S+S  
Sbjct: 171 IVSSQEAIRAVPGSVREASFGLGANKWQTIRKVVLPAALPGILTGFILSLSRA 223



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 422 AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
              LA  P+ VF      +   +    N  L  +L M       I+ +      A P   
Sbjct: 126 ISNLAGVPSIVFGLLGYTLFVGAAGMGNSVLAAALTMSLLILPVIIVSSQEAIRAVPGSV 185

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           +E +       W+  R ++LP   P  +TG I +   A   +    V     I L T 
Sbjct: 186 REASFGLGANKWQTIRKVVLPAALPGILTGFILSLSRALGETAPLVVIGIPTILLATP 243


>gi|49481279|ref|YP_038329.1| phosphate ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141228|ref|YP_085600.1| phosphate ABC transporter, permease [Bacillus cereus E33L]
 gi|49332835|gb|AAT63481.1| phosphate ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974697|gb|AAU16247.1| phosphate ABC transporter, permease [Bacillus cereus E33L]
          Length = 288

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLP 62
            N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +     
Sbjct: 11  ENMASRFLKDRIYKLLFYIAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAG 70

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLT 117
             A+ +   +  ++VI + F F   T       AK      V+      +  +P + F  
Sbjct: 71  IAAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGL 130

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + W
Sbjct: 131 LGLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKW 188

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGG 203
           Q  + + +P++ PG++    +++S  
Sbjct: 189 QTMYRIVLPYAFPGIITGCTLAISRA 214



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + PN   
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 214


>gi|82617305|emb|CAI64210.1| probable phosphate transporter permease [uncultured archaeon]
          Length = 296

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 86/207 (41%), Gaps = 5/207 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ F+L  G+  ++  GI +  +      I       + +      +    + +++I++ 
Sbjct: 30  IIIFLLKEGLPVLVKVGIIDFCIGMKWNPIAIAGEPSYGIFPMIVASFYVAIGSLIIAVP 89

Query: 82  FTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAEL 136
                A   A+        +L   ++++  IP  ILGF+   ++  F+    G    + L
Sbjct: 90  LGLACAVFLAEIAPSWARSILKHAIELLVGIPSVILGFVGLVLLVPFIRDNFGGWGFSIL 149

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A    +    +  +      ++ ++PR+ +E S +   + W     + +P +  G+V  +
Sbjct: 150 AGSIILAIMALPRIISISDDAIRSVPREYKEASLALGATHWHTIRKVILPSARSGIVAAV 209

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +++M+      +A  M+V    ++P P
Sbjct: 210 ILAMATSIGETMAVLMVVGNTPILPAP 236



 Score = 44.9 bits (105), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 18/178 (10%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAA 427
            +  Y I+   +  F V +  +I   I +P+G+               S ++   +LL  
Sbjct: 63  GEPSYGIFPMIVASFYVAIGSLI---IAVPLGLACAVFLAEIAPSWARSILKHAIELLVG 119

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P+ +          P +      +  +      +L I      I+        + P ++
Sbjct: 120 IPSVILGFVGLVLLVPFIRDNFGGWGFSILAGSIILAIM-ALPRIISISDDAIRSVPREY 178

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           KE + +   T W   R +ILP      V   I A   +   ++   +       L   
Sbjct: 179 KEASLALGATHWHTIRKVILPSARSGIVAAVILAMATSIGETMAVLMVVGNTPILPAP 236


>gi|295837273|ref|ZP_06824206.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
 gi|295826443|gb|EFG64859.1| proline/glycine betaine ABC transporter, permease [Streptomyces sp.
           SPB74]
          Length = 235

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A +I +PV +W+G      +     + +  A P      L+       H      
Sbjct: 36  LSLLVACLIALPVALWLGHLGKGGALAVNISNVGRAIPTLALLALLSLTPLRQHGETPTL 95

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           ++L++       +L N   G         E A    ++G + +  + LP  FP  +TG  
Sbjct: 96  IALVLF--AIPPVLTNAYIGMREADRAVVEAARGMGMSGGQVFLRVELPLAFPLLMTGIR 153

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +A       + ++ +   G       GLG  I       +  +
Sbjct: 154 SAAVQTVATATLAAIPGGG-------GLGRVITAGFNLQNTSQ 189



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 17/181 (9%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L ++ + T L +L A +I+L        L     + G + V I ++ ++I        
Sbjct: 25  HRLLEHLAFTGLSLLVACLIALPVALWLGHLG----KGGALAVNISNVGRAI------PT 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  +          E   + A+    +  +  + Y  +    R + E +R   +SG Q
Sbjct: 75  LALLALLSLTPLRQHGETPTLIALVLFAIPPVLTNAYIGMREADRAVVEAARGMGMSGGQ 134

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P + P L+  +  +          + +   G       G+G  I      Q+ 
Sbjct: 135 VFLRVELPLAFPLLMTGIRSAAVQTVATATLAAIPGGG-------GLGRVITAGFNLQNT 187

Query: 239 L 239
            
Sbjct: 188 S 188


>gi|167569897|ref|ZP_02362771.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 250

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 69/225 (30%), Gaps = 17/225 (7%)

Query: 37  HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96
            G  E        +  P      SL          + +A     +          +    
Sbjct: 22  PGWLEPLFAPFADNGAPAIYRRASLLDLTLSHLAIVGAASAAGAIVALAAGIFVTRRAGA 81

Query: 97  G--MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
               V   ++ I Q+ P +  L   V                  + A+    +  +  S 
Sbjct: 82  EFLPVARSVVHIGQTFPPVAVLALAVPAVGFGV--------KPVLIALILYGLLPIFEST 133

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
              L ++P D  + +R   +S  Q+  ++ +P + P ++  + ++       VV +    
Sbjct: 134 IAGLQDVPADAVDAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTA 186

Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
              + +   G+G  I   ++  +   +L   L +  +  L    L
Sbjct: 187 TIGSTVAAKGLGDVIIAGLQTSNTAFVLQGGLIVALLAVLIYDAL 231



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P D  
Sbjct: 90  VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 145

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++  +   ++ LP  FP  + G   A        +++   +     +   GLG
Sbjct: 146 DAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTATIGSTVAAKGLG 198

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G LI+    + +
Sbjct: 199 DVIIAGLQTSNTAFVLQGGLIVALLAVLI 227


>gi|163736448|ref|ZP_02143867.1| Phosphate transport system permease protein 2 [Phaeobacter
           gallaeciensis BS107]
 gi|161390318|gb|EDQ14668.1| Phosphate transport system permease protein 2 [Phaeobacter
           gallaeciensis BS107]
          Length = 456

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 61/180 (33%), Gaps = 4/180 (2%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV  ++   +             D      +   +      +   ML  + ++L      
Sbjct: 195 LVDALVAAEVAAKTFNLDFITGADASDARPEAAGMGVSMMGSLFMMLVVLALALPIGVAA 254

Query: 87  ATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           +      A    +  V+   +  + ++P + F    +  F+N      + A L     + 
Sbjct: 255 SIYLEEFAPKNWITDVIEVNISNLAAVPSIVFGILGLAVFINYM-HLPMSAPLVGGLVLT 313

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  S   SL ++P  + + +     S  Q  ++  +P + PG++   ++ ++  
Sbjct: 314 LMTLPTVIISTRASLKSVPPSIRDAALGVGASRMQAVFHHVLPLAAPGILTGTIIGLAQA 373



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              I+  I+     LAA P+ VF  
Sbjct: 229 MGVSMMGSLFMMLVVLALALPIGVAASIYLEEFAPKNWITDVIEVNISNLAAVPSIVFGI 288

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +  ++  L   L++   T   ++ +  A   + P   ++ A     +  +
Sbjct: 289 LGLAVFINYMHLPMSAPLVGGLVLTLMTLPTVIISTRASLKSVPPSIRDAALGVGASRMQ 348

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 349 AVFHHVLPLAAPGILTGTIIGLAQA 373


>gi|158336621|ref|YP_001517795.1| phosphate ABC transporter permease PstA [Acaryochloris marina
           MBIC11017]
 gi|158306862|gb|ABW28479.1| phosphate ABC transporter, permease protein PstA [Acaryochloris
           marina MBIC11017]
          Length = 284

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 6/196 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  V +  + N++  G Q               L+    P     T L +   M +SL  
Sbjct: 26  ITAVFLWLLSNVIWQGGQAVNGTFLTQAPAKAGLEGGIAP-ILVSTGLVLGVCMGVSLPL 84

Query: 83  TFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
               A   +    +R   V+   LDI+  +P + F  F   +F  +    +  + L+   
Sbjct: 85  GLGTAVFLSEFNPQRSHRVIRLSLDILAGVPSIVFGLFGNAFFSKVLD--LGFSILSGGL 142

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    +  +  S+   L N+PR+  + + +  LS       L +P ++PG+   +++ +
Sbjct: 143 TLACMVLPILIRSIQVGLVNVPREYRQAAAALGLSRLGTLKTLILPAALPGIAVGVLLGI 202

Query: 201 SGGWFFVVASEMIVVG 216
                   A+ +   G
Sbjct: 203 GRA-IAETAALIFTSG 217



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V +++ +    V   +   + WQ    +   F  Q        G I    V   +++   
Sbjct: 18  VVWLVALGITAVFLWLLSNVIWQGGQAVNGTFLTQAPAKAGLEGGIAPILVSTGLVLGVC 77

Query: 400 IWIPVGIWIGFRPHIS--------SKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNL 450
           + + + + +G    +S          I+    +LA  P+ VF     +  S    L  ++
Sbjct: 78  MGVSLPLGLGTAVFLSEFNPQRSHRVIRLSLDILAGVPSIVFGLFGNAFFSKVLDLGFSI 137

Query: 451 WLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
               L +      IL  ++  G    P ++++ A++  ++     + +ILP   P    G
Sbjct: 138 LSGGLTLACMVLPILIRSIQVGLVNVPREYRQAAAALGLSRLGTLKTLILPAALPGIAVG 197

Query: 510 AITACGGA 517
            +   G A
Sbjct: 198 VLLGIGRA 205


>gi|68535444|ref|YP_250149.1| phosphate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|260578344|ref|ZP_05846259.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium jeikeium ATCC 43734]
 gi|68263043|emb|CAI36531.1| phosphate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|258603525|gb|EEW16787.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium jeikeium ATCC 43734]
          Length = 306

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 8/186 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIV---DIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           L    L+  +  +L  G+     P   +      P              T +++L    +
Sbjct: 43  LALVPLLWVLFKVLSEGLPAVLNPDWWMFDMVGQPRNKAGGGAVHAIIGTLMQVLVTSAL 102

Query: 79  SLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+      A    +  R   LG +   ++DI+  +P +    F    ++ ++  +  G  
Sbjct: 103 SIPIGVFTAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSG-- 160

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            A   A+    V  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V  
Sbjct: 161 FAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTG 220

Query: 196 MMMSMS 201
           +M++++
Sbjct: 221 IMLAVA 226



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 19/195 (9%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG--------------C 384
           + + ++  F   +     + + ++ +   +      D      +G               
Sbjct: 31  KFATVIIYFAMALALVPLLWVLFKVLSEGLPAVLNPDWWMFDMVGQPRNKAGGGAVHAII 90

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPAN--VFFPLVVS 439
            T+ +V+V   ++  I +   I++        +         +L   P+     F   + 
Sbjct: 91  GTLMQVLVTSALSIPIGVFTAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMW 150

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
              +        +SL ++      I+ N        P D +E + +  +  W+    I+L
Sbjct: 151 ITMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVL 210

Query: 500 PGIFPYYVTGAITAC 514
           P      VTG + A 
Sbjct: 211 PTALSGIVTGIMLAV 225


>gi|99081101|ref|YP_613255.1| phosphate ABC transporter permease [Ruegeria sp. TM1040]
 gi|99037381|gb|ABF63993.1| Phosphate transport system permease protein 2 [Ruegeria sp. TM1040]
          Length = 455

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 50/142 (35%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   M   + ++L      +      A    +  ++   +  + ++P + F    + 
Sbjct: 232 MLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLA 291

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N        A L     +    +  +  S   SL  +P  + + +     S  Q  +
Sbjct: 292 VFINYM-HLPTSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQAVF 350

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 351 HHVLPLAAPGILTGTIIGLAQA 372



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++ +   + +P+G+              I+  I+     LAA P+ VF  
Sbjct: 228 MGVSMLGSLFMMFVVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGI 287

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +   +  L   L++   T   I+ +  A   A P   ++ A     +  +
Sbjct: 288 LGLAVFINYMHLPTSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQ 347

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 348 AVFHHVLPLAAPGILTGTIIGLAQA 372


>gi|327439646|dbj|BAK16011.1| ABC-type phosphate transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 314

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 60/138 (43%), Gaps = 10/138 (7%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            +I+++    +   AA       S R+  ++ PIL+++  +P + +    LTF       
Sbjct: 98  TLIAIIVAVPFGLGAAIYLSEYASERVRKIIKPILEVLAGVPTIVYGFFALTFITPILQA 157

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + P   I   ++    +    +  +T     ++ ++P  + E +     + ++    + +
Sbjct: 158 IIPDLKIFNAISPGIVVGIMILPMITSMSEDAMSSVPSSIREGALGLGATKFEVAVKVVL 217

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++ G+V ++++ +S  
Sbjct: 218 PAALSGIVASVVLGISRA 235



 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF------- 433
           +F    + +IA I+ +P G+             +   I+P  ++LA  P  V+       
Sbjct: 91  IFGTFKITLIAIIVAVPFGLGAAIYLSEYASERVRKIIKPILEVLAGVPTIVYGFFALTF 150

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P++ + +    +   +   +++       I        S+ P+  +E A     T + 
Sbjct: 151 ITPILQAIIPDLKIFNAISPGIVVGIMILPMITSMSEDAMSSVPSSIREGALGLGATKFE 210

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
               ++LP      V   +     A
Sbjct: 211 VAVKVVLPAALSGIVASVVLGISRA 235


>gi|237785025|ref|YP_002905730.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385]
 gi|237757937|gb|ACR17187.1| ABC-type transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 220

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 12/213 (5%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     +       ++  V+++ I+S++ IP GI IG     +  I        A P   
Sbjct: 17  WSGNGSITQRLVEHLWFTVMIVAISSVLAIPTGIVIGHIRRGAGLIGALTGAARAIPTLG 76

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
              L    +      P L L +L I      +L    +G  +   D    A +  +T W+
Sbjct: 77  LLTLFGLWLGIGLKAPTLALIVLAIPS----LLAGAYSGVESISPDIPSAAQAIGMTPWQ 132

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
               + LP   P  + G   A       ++     +    +    GLG ++    +   +
Sbjct: 133 VITSVELPLALPVIMGGIRAA-------TLQVIATATLAAYTADIGLGRFLFAGLKSRDY 185

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
            E++   LI+    + ++  L      +     
Sbjct: 186 SEMLGSSLIVIALAVVIDAALGRA-QRWAGNRF 217



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            S+ Q         +  + IS +       +    RR   ++  +    ++IP       
Sbjct: 21  GSITQRLVEHLWFTVMIVAISSVLAIPTGIVIGHIRRGAGLIGALTGAARAIPT------ 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  + L+   +     A   A+    + ++    Y  + +I  D+   +++  ++ WQ
Sbjct: 75  --LGLLTLFGLWLGIGLKAPTLALIVLAIPSLLAGAYSGVESISPDIPSAAQAIGMTPWQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
               + +P ++P ++  +          V+A+  +      I   G+G ++   +K +D 
Sbjct: 133 VITSVELPLALPVIMGGIR----AATLQVIATATLAAYTADI---GLGRFLFAGLKSRDY 185

Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261
             +L + L ++ +  + D  L R
Sbjct: 186 SEMLGSSLIVIALAVVIDAALGR 208


>gi|220905719|ref|YP_002481030.1| molybdate ABC transporter inner membrane subunit [Cyanothece sp.
           PCC 7425]
 gi|219862330|gb|ACL42669.1| molybdate ABC transporter, inner membrane subunit [Cyanothece sp.
           PCC 7425]
          Length = 616

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 30/223 (13%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWI-GFRPHISSKIQPFAQLLAAFPANVFFPLVVS---- 439
           I++    +  +I     I    W+ G+R    S I+            +  P VV     
Sbjct: 10  ISLKTAGIATLITFFTGIAAAFWMLGYRGRWKSLIEGLF-----VSPLILPPTVVGFLLL 64

Query: 440 -----------CVSYYHLNPNLWLSLLMIFGTQ--WYILFNVIAGA-SAFPNDFKEVASS 485
                        + +  +        +I  T   + +++    GA     +   +VA +
Sbjct: 65  LLFGKNGPLGQLTAQFDFSVVFTWYAAVITATVVSFPLMYKTALGAFEQVDSSLLQVAQT 124

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +  R +  I+LP   P ++ G   +   A      + + +        T   A I  
Sbjct: 125 LGASKLRIFWQILLPLSIPGWLAGTTLSFARALGEFGATLMLAGNIPGQTQTLPMA-IYF 183

Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF--LWHPLYLYGTRCLR 586
           + E G+  E  L VL++    L+      LW   Y    R LR
Sbjct: 184 AVEAGAMNEAWLWVLVIMTLSLSAIVVVNLWQKQY---ERRLR 223



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 2/129 (1%)

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +   V+    AA+          M  +   +   +   L +V+++   S  + FW 
Sbjct: 76  LTAQFDFSVVFTWYAAVITATVVSFPLMYKTALGAFEQVDSSLLQVAQTLGASKLRIFWQ 135

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI- 241
           + +P S+PG +    +S +       A+ M+  G+       +   I  A++   +    
Sbjct: 136 ILLPLSIPGWLAGTTLSFARALGEFGATLMLA-GNIPGQTQTLPMAIYFAVEAGAMNEAW 194

Query: 242 LYAMLTMLG 250
           L+ ++ M  
Sbjct: 195 LWVLVIMTL 203


>gi|241113716|ref|YP_002973551.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861924|gb|ACS59590.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 285

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           ++   + L    + Q    +       + +S+L         A+    G     +L ++ 
Sbjct: 69  LEPFFLFLKTEGVVQSFLNSLGAAAITVALSILLGAPAGYALARYDFRGKDSYRLLVLLT 128

Query: 109 SIPILGFL--TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
               L  L    TV +        ++G  L                        +P++LE
Sbjct: 129 RAFPLAILALPLTVSFIRLGLYDTILGVGLIHTVLALPFA----ALVTQGIFLGVPKELE 184

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +  F  +  Q F+ +  P ++PG+V   + +    W  V A+ ++ V +  +      
Sbjct: 185 EAAWVFGCTRIQAFFKVVAPLALPGIVATAVFAFVISWNEVFAASVLTVRNRTLT----- 239

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           +Y+   + E  +       L ++    ++   + R +  
Sbjct: 240 AYLLTVLSESPMHYRFAGGLMLILPSVVFIFAVRRYLFA 278



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 2/156 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFP-ANVFFPLVVSCVSY 443
           ++    + + ++ ++  P G  +               LL  AFP A +  PL VS +  
Sbjct: 88  SLGAAAITVALSILLGAPAGYALARYDFRGKDSYRLLVLLTRAFPLAILALPLTVSFIRL 147

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L + L+       +            P + +E A  F  T  + +  ++ P   
Sbjct: 148 GLYDTILGVGLIHTVLALPFAALVTQGIFLGVPKELEEAAWVFGCTRIQAFFKVVAPLAL 207

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           P  V  A+ A   +WN    + V +  +  L    L
Sbjct: 208 PGIVATAVFAFVISWNEVFAASVLTVRNRTLTAYLL 243


>gi|289523920|ref|ZP_06440774.1| phosphate ABC transporter, permease protein PstA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289502576|gb|EFD23740.1| phosphate ABC transporter, permease protein PstA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 291

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               +++ GI+  ++           +      ++    +      T   +L ++  SL 
Sbjct: 26  FAVILILFGILGFVIVQGAGALSIEFLTQPPRNSMTEGGILTPIVGTIQLILVSIAFSLP 85

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A   A   K       L   +  + ++P + +  F + +F      K   + L+A
Sbjct: 86  VGICTAIYLAEYAKDDIFTTTLRLAIRSLAAVPSIVYGLFGLSFFCITL--KFNPSLLSA 143

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +   +L  +P+ L   S +   S WQ    + VP +MP ++   ++
Sbjct: 144 GLTLGCIALPLIVGAAETALLAVPQSLRYASYALGASKWQTISKVVVPTAMPSILTGAIL 203

Query: 199 SMS 201
           S+ 
Sbjct: 204 SVG 206



 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW--IPVGI 406
             ++ G+   +  Q  G +   F  Q     +  G I    V  + +I   I   +PVGI
Sbjct: 29  ILILFGILGFVIVQGAGALSIEFLTQPPRNSMTEGGILTPIVGTIQLILVSIAFSLPVGI 88

Query: 407 WIGFRPHISSK-------IQPFAQLLAAFPANVFFPLVVSCV-SYYHLNPNLWLSLLMIF 458
                    +K       ++   + LAA P+ V+    +S        NP+L  + L + 
Sbjct: 89  CTAIYLAEYAKDDIFTTTLRLAIRSLAAVPSIVYGLFGLSFFCITLKFNPSLLSAGLTLG 148

Query: 459 GTQWYILFNVIAGAS-AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                ++      A  A P   +  + +   + W+    +++P   P  +TGAI + G
Sbjct: 149 CIALPLIVGAAETALLAVPQSLRYASYALGASKWQTISKVVVPTAMPSILTGAILSVG 206


>gi|255283013|ref|ZP_05347568.1| spermidine/putrescine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
 gi|255266552|gb|EET59757.1| spermidine/putrescine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
          Length = 265

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 90/243 (37%), Gaps = 17/243 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            LA  +V  ++ ++ +          + ++     + ++L      +    ++   + LL
Sbjct: 18  FLALFVVAPLLVLIYYAFTNGQGQFTMSNLTGFFTNPNTL-GTLVYSFAVSITTTAVCLL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA---- 137
             +  A + AKS+     ++ ++ IM       ++ F++          +I   LA    
Sbjct: 77  LAYPTAYILAKSKLKAKSVIVMIFIM-----PMWINFSLRITALKEILTLIEHNLAFYPF 131

Query: 138 --AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
             A+  +    +  M   +Y ++  +   L E +R    +  + F  + +P S+PG+V  
Sbjct: 132 FNAVIGMTYDFLPFMILPIYNTIVKLDESLLEAARDLGANEREAFLKVTLPLSVPGIVSG 191

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + M         V  +M+     ++     GS I       +        L +L +I L+
Sbjct: 192 IAMVFLPAMTNYVVLDMLYNSTYIM-----GSLIGSYFAAYNWNGGSMIALILLAIICLF 246

Query: 256 DQL 258
             L
Sbjct: 247 TLL 249



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
             F+P   + +   +      +            ++N I           E A       
Sbjct: 126 LAFYPFFNAVIGMTYDFLPFMILP----------IYNTIV---KLDESLLEAARDLGANE 172

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG-AYIAESTEK 549
              +  + LP   P  V+G       A    +V ++  +   ++  + +G  + A +   
Sbjct: 173 REAFLKVTLPLSVPGIVSGIAMVFLPAMTNYVVLDML-YNSTYIMGSLIGSYFAAYNWNG 231

Query: 550 GSFPEVVLGVLIMCCFVLA 568
           GS   ++L + I+C F L 
Sbjct: 232 GSMIALIL-LAIICLFTLL 249


>gi|168333565|ref|ZP_02691830.1| binding-protein-dependent transport systems inner membrane
           component [Epulopiscium sp. 'N.t. morphotype B']
          Length = 274

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 17/209 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-----IPILGFLTF- 118
             R+        ++  +  +  A +          ++ IL ++       +    ++   
Sbjct: 58  LLRSFRLAFITTIVCFVAAYPLAMILNSKEFSNKTIILILIVLPMWMNSLMRTYAWMILL 117

Query: 119 -------TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
                  T++ F+ +   + +  E A IF +  +    M   +Y S+  I   L E S  
Sbjct: 118 ENKGVVNTILNFLGIPTQQFLYGESAIIFGMIYNFFPFMILPIYNSISKIDNALIEASYD 177

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              + +  F  + +P SMPG++  ++M         + + ++  G  V+    IG+ I  
Sbjct: 178 LGANKFVTFRRVILPLSMPGVITGVIMVFMPSLTTFMITRLLGGGQVVL----IGNMIEE 233

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
                +      A+  +L  I L   + F
Sbjct: 234 QFTRTNNWGFGSALSMILMAIILVSIVFF 262



 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              +   MI+    +++  +    S   N   E +       +  +R +ILP   P  +T
Sbjct: 141 ESAIIFGMIYNFFPFMILPIYNSISKIDNALIEASYDLGANKFVTFRRVILPLSMPGVIT 200

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI------AESTEKGSFPEVVLGVLIM 562
           G I     +    +++ +   G + L    +G  I        +   GS   ++L  +I+
Sbjct: 201 GVIMVFMPSLTTFMITRLLGGGQVVL----IGNMIEEQFTRTNNWGFGSALSMILMAIIL 256

Query: 563 CCFVL 567
              V 
Sbjct: 257 VSIVF 261


>gi|168214871|ref|ZP_02640496.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens CPE str. F4969]
 gi|170713702|gb|EDT25884.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens CPE str. F4969]
          Length = 274

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 94/252 (37%), Gaps = 18/252 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              +F +   V+++G I I   G    T    +      +     LP     T   +L +
Sbjct: 15  LSALFTIGILVIILGFIFIKGIGKINLTF---LTSNYSASGGGGILP-MIVTTLWTVLLS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + ++     + A      AK  ++   +    + +  IP + +  F  ++F+     K+ 
Sbjct: 71  LAVATPIGVLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVAL--KMG 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LA    +    +  +  +  ++L  +P    E S     + +Q  + + +P +MPG+
Sbjct: 129 YSILAGSLTVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----YIALAI----KEQDLLAILYA 244
           +  +++S+        A+ ++  G       GI S        A     ++ D+      
Sbjct: 189 LSGVILSIGRI-IGESAAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAV 247

Query: 245 MLTMLGVIFLYD 256
            + ++ +I   +
Sbjct: 248 GIVLIVIILALN 259



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 90/242 (37%), Gaps = 14/242 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + + I    +      GI   ++ ++ ++++      ++ +   T++ V++ + +A+ I 
Sbjct: 19  FTIGILVIILGFIFIKGIGKINLTFLTSNYSASGGGGILPMIVTTLWTVLLSLAVATPIG 78

Query: 402 IPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLV-VSCVSYYHLNPNLWLSLLMI 457
           +   +++         ++      + LA  P+ V+     +  V    +  ++    L +
Sbjct: 79  VLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVALKMGYSILAGSLTV 138

Query: 458 FGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                 ++           P  ++E +     T ++    +ILP   P  ++G I + G 
Sbjct: 139 SIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGILSGVILSIGR 198

Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGSFPEVVLGVLIMCCFVLA 568
               S  + + + G +     G+ +     T        EKG         +++   +LA
Sbjct: 199 IIGES-AAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAVGIVLIVIILA 257

Query: 569 LN 570
           LN
Sbjct: 258 LN 259


>gi|213691258|ref|YP_002321844.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213693055|ref|YP_002323641.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522719|gb|ACJ51466.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524516|gb|ACJ53263.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 325

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 6/216 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFA 422
              + + F YQ  +Y  WL    M+ VV  +  A+II    G  I          +    
Sbjct: 95  WQNVQDTFAYQHGVYTRWLFNTIMYAVVAGVG-ATIIATFAGYAIATMRFPGRNALLAVT 153

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               + P+ V    +    S   L    W  ++    T + +   +I   ++ P    E 
Sbjct: 154 LAFMSIPSTVITVPLFLMYSKIGLVGTPWAVIIPQLATPFGLYLMIIYAQTSIPVSLIEA 213

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGA 541
           A       W  +  +  P + P +VT  +    G W N  +   + +  + +  T GL  
Sbjct: 214 AKLDGANTWTIFWKVGFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLTNTNDYPLTVGLNM 273

Query: 542 YI---AESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           ++   A+ T  G  P  ++    +   V  +  F++
Sbjct: 274 WLKMGAQGTSDGQVPNNLIITGSLIAVVPLIIAFMF 309



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 9/203 (4%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T +  + A V + +         A  R      L+ +     SIP       TV 
Sbjct: 111 RWLFNTIMYAVVAGVGATIIATFAGYAIATMRFPGRNALLAVTLAFMSIPSTV---ITVP 167

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+      ++G   A I     +  + +   +  +  +IP  L E ++    + W  FW
Sbjct: 168 LFLMYSKIGLVGTPWAVIIPQL-ATPFGLYLMIIYAQTSIPVSLIEAAKLDGANTWTIFW 226

Query: 182 YLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQD 237
            +G P   PG V  ++ ++ G W  + +   M+   +      G+  ++   A    +  
Sbjct: 227 KVGFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLTNTNDYPLTVGLNMWLKMGAQGTSDGQ 286

Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260
           +   L    +++ V+ L    +F
Sbjct: 287 VPNNLIITGSLIAVVPLIIAFMF 309


>gi|261404066|ref|YP_003240307.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|329928010|ref|ZP_08282014.1| spermidine/putrescine ABC transporter, permease protein PotC
           [Paenibacillus sp. HGF5]
 gi|261280529|gb|ACX62500.1| binding-protein-dependent transport systems inner membrane
           component [Paenibacillus sp. Y412MC10]
 gi|328938114|gb|EGG34511.1| spermidine/putrescine ABC transporter, permease protein PotC
           [Paenibacillus sp. HGF5]
          Length = 268

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 7/205 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVV 121
           ++     +  L+  VIS + + +  T AA S R LG      ++ +  +P++       +
Sbjct: 56  RHVMEALMNSLTVAVISTIVSTLLGTAAALSLRNLGRKGRSGMNGLLYLPVIIPDIIMGL 115

Query: 122 YFMNLYPG-KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             + L+    +   +   I A  T  +  +   +   L  + + L+E ++    + WQ F
Sbjct: 116 SLLVLFSQLNMPLGKTTVIIAHITFSLSYVYVVVTARLSGMGKQLDEAAQDLGATPWQTF 175

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ +P   PG++   +++ +      + S   V G +   LP        A  ++ +  
Sbjct: 176 RHVTLPQIAPGIISGALIAFTLSLDDFMVS-FFVAGPSSTTLP----IYIYAQVKRGISP 230

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIV 265
            + A+ T+L ++ +   LL + ++ 
Sbjct: 231 EINALCTLLILVSITLILLAQYILN 255



 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 15/153 (9%)

Query: 431 NVFFPLVV--------SCVSYYHLNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDF 479
            ++ P+++          V +  LN  L  + ++I    +   Y+   V A  S      
Sbjct: 101 LLYLPVIIPDIIMGLSLLVLFSQLNMPLGKTTVIIAHITFSLSYVYVVVTARLSGMGKQL 160

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            E A     T W+ +R++ LP I P  ++GA+     A+  S+   + S+      +T L
Sbjct: 161 DEAAQDLGATPWQTFRHVTLPQIAPGIISGALI----AFTLSLDDFMVSFFVAGPSSTTL 216

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             YI    ++G  PE+     ++    + L   
Sbjct: 217 PIYIYAQVKRGISPEINALCTLLILVSITLILL 249


>gi|153876893|ref|ZP_02003981.1| Binding-protein-dependent transport systems inner membrane
           component [Beggiatoa sp. PS]
 gi|152066644|gb|EDN66020.1| Binding-protein-dependent transport systems inner membrane
           component [Beggiatoa sp. PS]
          Length = 86

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +    T   ++ A  I++L       LAA S++   VL+P++D MQ++P   +L   +
Sbjct: 3   LWEATLETFTLVIVATFIAVLVGIPIGILAAISKKANHVLMPLMDFMQTMPAFVYLIPAI 62

Query: 121 VYFMNLY 127
            +F    
Sbjct: 63  PFFGLGV 69



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T   V+V   IA ++ IP+GI        +  + P    +   PA V+    +       
Sbjct: 10  TFTLVIVATFIAVLVGIPIGILAAISKKANHVLMPLMDFMQTMPAFVYLIPAIPFFGLGV 69

Query: 446 LNPNLWLSLLMI 457
           ++     S L+ 
Sbjct: 70  VSALFQPSFLLC 81


>gi|332686418|ref|YP_004456192.1| phosphate transport system permease PstA [Melissococcus plutonius
           ATCC 35311]
 gi|332370427|dbj|BAK21383.1| phosphate transport system permease protein PstA (TC 3.A.1.7.1)
           [Melissococcus plutonius ATCC 35311]
          Length = 294

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 9/142 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP--ILGFLTFT 119
              +   ++  M+IS   +          A+   L  ++   ++I+ S+P  ++G   F 
Sbjct: 62  LFNSLYLLIITMLISFPISLGAGIYLSEYAEKNWLTDIVRSSIEILSSLPSVVVGLFGFL 121

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +      Y   +I   LA  F         +T ++ +SL  +     E   S  LS W+ 
Sbjct: 122 IFVIQIGYGFSIISGALALTFFNLPL----LTRNVEESLKAVHYTQREAGLSLGLSKWET 177

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
              + VP ++PG++  +++S  
Sbjct: 178 VIRVVVPEALPGIITGVILSSG 199



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 15/157 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFP 429
           YQ    +      +++ +++ ++I+  I +  GI++        ++  ++   ++L++ P
Sbjct: 52  YQSGGGIGIQLFNSLYLLIITMLISFPISLGAGIYLSEYAEKNWLTDIVRSSIEILSSLP 111

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEV 482
           +     +VV    +      +     +I G      FN+                  +E 
Sbjct: 112 S-----VVVGLFGFLIFVIQIGYGFSIISGALALTFFNLPLLTRNVEESLKAVHYTQREA 166

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             S  ++ W     +++P   P  +TG I + G  + 
Sbjct: 167 GLSLGLSKWETVIRVVVPEALPGIITGVILSSGRIFG 203


>gi|237732176|ref|ZP_04562657.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907715|gb|EEH93633.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 243

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + +I++L          +        ++  I  + Q+ P +  L   V  
Sbjct: 50  ALSHFGLVGISSLIAVLIGTGAGIAVTRPWGAEFRPMVETIAAVGQTFPPVAVLAIAV-- 107

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                P    G E A I  I    +  +  +    L  I   + +++    +S  Q+   
Sbjct: 108 -----PVMGFGPEPAIIALILYGVL-PILQATLAGLGGISPSVMDIASGMGMSQGQRLRK 161

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P + P ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 162 VELPLAAPVILAGIRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 214

Query: 243 YAMLTMLGVIFLYDQ 257
              L +     + D+
Sbjct: 215 QGALLVALAAVIVDR 229



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 17/194 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLV 437
           L       V +  +IA +I    GI +       ++ +P  + +AA    FP      + 
Sbjct: 49  LALSHFGLVGISSLIAVLIGTGAGIAV--TRPWGAEFRPMVETIAAVGQTFPPVAVLAIA 106

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V  + +    P   +  L+++G    IL   +AG         ++AS   ++  +  R +
Sbjct: 107 VPVMGFG---PEPAIIALILYGVL-PILQATLAGLGGISPSVMDIASGMGMSQGQRLRKV 162

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P  + G  T+       + ++         +    LG  I       +   V+ 
Sbjct: 163 ELPLAAPVILAGIRTSVIINIGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQ 215

Query: 558 GVLIMCCFVLALNR 571
           G L++    + ++R
Sbjct: 216 GALLVALAAVIVDR 229


>gi|294790475|ref|ZP_06755633.1| putative ABC-type sugar transport system, permease component
           [Scardovia inopinata F0304]
 gi|294458372|gb|EFG26725.1| putative ABC-type sugar transport system, permease component
           [Scardovia inopinata F0304]
          Length = 319

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 80/232 (34%), Gaps = 5/232 (2%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F    G+ +G ++     I   F YQ  ++  W    T+  V++    A+++ I  G  +
Sbjct: 76  FTSTFGLGLGHSFALWENIQTVFAYQGGIFGRWF-LNTIIYVLLGAGGATLLAIMGGYAL 134

Query: 409 GFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
                   KI     + A + P            +   L    W  ++    + + +   
Sbjct: 135 AKFRFPGRKICFAVIIGAISVPGIALAVPQFLLFAQLGLTNTPWAMIIPSLVSTFGLYLM 194

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEV 526
            I    A P++  E A        R +  I LP + P  VT A+      W N  +   +
Sbjct: 195 WIFSDQAVPDELLEAARVDGAGEMRTFFQISLPLLAPGIVTTALFTIVATWNNYFLPLIM 254

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG--SFPEVVLGVLIMCCFVLALNRFLWHP 576
               + +  T GL  +  ++   G  +   +V+   ++    L +   L   
Sbjct: 255 IKDANWYPLTIGLNQWKDQAGTAGGQAIQNLVITGSLITIIPLVIAFLLLQR 306



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T + +L     + L   +     AK R     +   ++    S+P +       +
Sbjct: 107 RWFLNTIIYVLLGAGGATLLAIMGGYALAKFRFPGRKICFAVIIGAISVPGIALAVPQFL 166

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L           A+        + +      S   +P +L E +R       + F+
Sbjct: 167 LFAQLGLTNTP----WAMIIPSLVSTFGLYLMWIFSDQAVPDELLEAARVDGAGEMRTFF 222

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V   + ++   W 
Sbjct: 223 QISLPLLAPGIVTTALFTIVATWN 246


>gi|300772916|ref|ZP_07082785.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759087|gb|EFK55914.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 217

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +   +T +   ++     L       L          +++ +  +   I++I +SIP 
Sbjct: 9   LLEGTWQTLVMTFASGFFGFLLGLPTGILLFVTRKGQIMQNKAVHQITSVIVNIFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AA+  +       +   +  SL  IP  L E +R+ 
Sbjct: 68  FIILIVWMIPFTRELVGTSIGVS-AALVPLSIGAAPFVARLVENSLLEIPAGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P S+P +V N  +++
Sbjct: 127 GATHKQIILKVLLPESLPSMVNNATITL 154



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPAN---VFF 434
           T+           ++ +P GI         I     +         +  + P     V+ 
Sbjct: 16  TLVMTFASGFFGFLLGLPTGILLFVTRKGQIMQNKAVHQITSVIVNIFRSIPFIILIVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +  +  L  L I G   ++   V       P    E A +   T  +  
Sbjct: 76  IPFTRELVGTSIGVSAALVPLSI-GAAPFVARLVENSLLEIPAGLIEAARAMGATHKQII 134

Query: 495 RYIILPGIFPYYVTGAITACGG 516
             ++LP   P  V  A      
Sbjct: 135 LKVLLPESLPSMVNNATITLIT 156


>gi|289426386|ref|ZP_06428129.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes SK187]
 gi|295131103|ref|YP_003581766.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes SK137]
 gi|289153114|gb|EFD01832.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes SK187]
 gi|291375077|gb|ADD98931.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes SK137]
 gi|313763528|gb|EFS34892.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL013PA1]
 gi|313773467|gb|EFS39433.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL074PA1]
 gi|313793919|gb|EFS41943.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL110PA1]
 gi|313801308|gb|EFS42559.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL110PA2]
 gi|313811519|gb|EFS49233.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL083PA1]
 gi|313816710|gb|EFS54424.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL059PA1]
 gi|313829462|gb|EFS67176.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL063PA2]
 gi|313831260|gb|EFS68974.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL007PA1]
 gi|313834871|gb|EFS72585.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL056PA1]
 gi|313839969|gb|EFS77683.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL086PA1]
 gi|314919356|gb|EFS83187.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL050PA1]
 gi|314920735|gb|EFS84566.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL050PA3]
 gi|314954429|gb|EFS98835.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL027PA1]
 gi|314957487|gb|EFT01590.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL002PA1]
 gi|314963727|gb|EFT07827.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL082PA1]
 gi|314968445|gb|EFT12543.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL037PA1]
 gi|314974136|gb|EFT18232.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL053PA1]
 gi|314976574|gb|EFT20669.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL045PA1]
 gi|314984393|gb|EFT28485.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL005PA1]
 gi|315079576|gb|EFT51569.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL053PA2]
 gi|315081195|gb|EFT53171.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL078PA1]
 gi|315095275|gb|EFT67251.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL038PA1]
 gi|315099156|gb|EFT71132.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL059PA2]
 gi|315100361|gb|EFT72337.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL046PA1]
 gi|315108954|gb|EFT80930.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL030PA2]
 gi|327328462|gb|EGE70224.1| maltose ABC transporter, permease protein [Propionibacterium acnes
           HL096PA2]
 gi|327444250|gb|EGE90904.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL043PA2]
 gi|327444871|gb|EGE91525.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL043PA1]
 gi|327452056|gb|EGE98710.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL092PA1]
 gi|327454907|gb|EGF01562.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL087PA3]
 gi|327457807|gb|EGF04462.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL083PA2]
 gi|328755259|gb|EGF68875.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL087PA1]
 gi|328758260|gb|EGF71876.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL025PA2]
 gi|328759991|gb|EGF73574.1| maltose ABC transporter, permease protein [Propionibacterium acnes
           HL099PA1]
          Length = 301

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTFTVV 121
           L  L    ++ + T     LAA S        RR G++ + ++ +   +  +  +   + 
Sbjct: 89  LNTLIIAAVTAVLTVFLGALAAYSFSRMRFKGRRGGLLALMLVQMFPQLLTVVAIFLLLT 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  ++YP   IG+ LA I       +   T+ MY     +P+ L+E +R       + F+
Sbjct: 149 WLGDVYPVLGIGSRLALIMVYLGGALGANTYLMYGFFNTVPQSLDEAARVDGAGHARIFF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P + P L    ++S  G +   V + +I+  D       IG Y  ++ +      +
Sbjct: 209 TLILPLAAPILAVVGLLSFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGV 268

Query: 242 LYAMLTMLGV 251
             A   +  +
Sbjct: 269 FAAGAVLAAL 278



 Score = 38.4 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 81/293 (27%), Gaps = 20/293 (6%)

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 S +    R T F +      W     +   V      + V+            S
Sbjct: 2   STATVSSAIKDANRNTPFSKRFKSQWWRHLLGIIAVVFAAFPLVYVLSASLAPGGTLTGS 61

Query: 337 NQRVSYMLDIFWFCVVC-GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           N+  S      +  +V   V     W     I+   T    +++  L   +  R+     
Sbjct: 62  NKLFSQTDFSNYSKLVSDPVRPYAQWYLNTLIIAAVTAVLTVFLGALAAYSFSRMRFKGR 121

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              ++ + +                   ++A F    +   V   +        + + L 
Sbjct: 122 RGGLLALML----------VQMFPQLLTVVAIFLLLTWLGDVYPVLGIGSRLALIMVYLG 171

Query: 456 MIFGTQWYI---LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              G   Y+    FN        P    E A        R +  +ILP   P      + 
Sbjct: 172 GALGANTYLMYGFFNT------VPQSLDEAARVDGAGHARIFFTLILPLAAPILAVVGLL 225

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G++   +V+ V      H  T  +G Y   STE  S   V     ++   
Sbjct: 226 SFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGVFAAGAVLAAL 278


>gi|59711292|ref|YP_204068.1| DL-methionine transporter subunit [Vibrio fischeri ES114]
 gi|59479393|gb|AAW85180.1| DL-methionine transporter subunit [Vibrio fischeri ES114]
          Length = 225

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           + L+   L      T   +  A ++          +   +++           VL  I++
Sbjct: 10  LDLNSKLLLNATGETLYMVAVAGIVGFAIGIPLGVVLHITKKGGLMENTAFNSVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  VGRSVPFLVLM-VAIIPVTKLIVGSFIGTT-AAIVPLTIGAIPFVARLIEGALIEVPSGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIITKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 30/199 (15%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V  I+   I IP+G+ +      G       +S +     +  +       P +
Sbjct: 24  TLYMVAVAGIVGFAIGIPLGVVLHITKKGGLMENTAFNSVLGAIVNVGRSV------PFL 77

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS--------AFPNDFKEVASSFHIT 489
           V  V+   +   +  S +        +    I   +          P+   E A S   T
Sbjct: 78  VLMVAIIPVTKLIVGSFIGTTAAIVPLTIGAIPFVARLIEGALIEVPSGLVEAAQSMGAT 137

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             +    ++LP   P  +           + S ++     G +       G +       
Sbjct: 138 PLQIITKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH------- 190

Query: 550 GSFPEVVLGVLIMCCFVLA 568
             +   ++ V ++   VL 
Sbjct: 191 -RYDLTIMAVTVVMLIVLV 208


>gi|119714718|ref|YP_921683.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioides sp. JS614]
 gi|119535379|gb|ABL79996.1| binding-protein-dependent transport systems inner membrane
           component [Nocardioides sp. JS614]
          Length = 257

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 65/169 (38%), Gaps = 9/169 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV--YFMNLYPGK 130
            +++ ++       A       R G + + + +I +++P    L   V   +      G 
Sbjct: 38  FTSLALAAAVGLPVALWLGHLGRGGFLAINVTNIGRAVPTFALLALLVTADWPGTGTLGP 97

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
              A LA I A+    +  +  S Y  +  +   +++ +    ++G Q+F+ + +P + P
Sbjct: 98  YGRAGLATIIALTLFALPPIITSSYVGVREVSPAVKQAADGMGMTGRQRFFRVELPLAAP 157

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
            ++  + +++   W     + ++         PG+G  I       +  
Sbjct: 158 LVLLGLRLALVQVWATATIAALVAG-------PGLGRVITDGFYRTNYG 199



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414
            ++ +   +  Y+    ++     ++ L    +      + +A+ + +PV +W+G     
Sbjct: 2   TSMTVLADAWDYLTTAGSWTGDGGMVELLLQQLLLSFTSLALAAAVGLPVALWLGHLGRG 61

Query: 415 SSKIQPFAQLLAAFPANVFFPLVVS--CVSYYHLNP----NLWLSLLMIFGTQWYILFNV 468
                    +  A P      L+V+        L P     L   + +       I+ + 
Sbjct: 62  GFLAINVTNIGRAVPTFALLALLVTADWPGTGTLGPYGRAGLATIIALTLFALPPIITSS 121

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G        K+ A    +TG + +  + LP   P  + G   A    W  + ++ + +
Sbjct: 122 YVGVREVSPAVKQAADGMGMTGRQRFFRVELPLAAPLVLLGLRLALVQVWATATIAALVA 181

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPE 554
                    GLG  I +   + ++ +
Sbjct: 182 G-------PGLGRVITDGFYRTNYGK 200


>gi|320457322|dbj|BAJ67943.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320459233|dbj|BAJ69854.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 326

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 6/216 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFA 422
              + + F YQ  +Y  WL    M+ VV  +  A+II    G  I          +    
Sbjct: 96  WQNVQDTFAYQHGVYTRWLFNTIMYAVVAGVG-ATIIATFAGYAIATMRFPGRNALLAVT 154

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               + P+ V    +    S   L    W  ++    T + +   +I   ++ P    E 
Sbjct: 155 LAFMSIPSTVITVPLFLMYSKIGLVGTPWAVIIPQLATPFGLYLMIIYAQTSIPVSLIEA 214

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGA 541
           A       W  +  +  P + P +VT  +    G W N  +   + +  + +  T GL  
Sbjct: 215 AKLDGANTWTIFWKVGFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLTNTNDYPLTVGLNM 274

Query: 542 YI---AESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           ++   A+ T  G  P  ++    +   V  +  F++
Sbjct: 275 WLKMGAQGTSDGQVPNNLIITGSLIAVVPLIIAFMF 310



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 9/203 (4%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T +  + A V + +         A  R      L+ +     SIP       TV 
Sbjct: 112 RWLFNTIMYAVVAGVGATIIATFAGYAIATMRFPGRNALLAVTLAFMSIPSTV---ITVP 168

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+      ++G   A I     +  + +   +  +  +IP  L E ++    + W  FW
Sbjct: 169 LFLMYSKIGLVGTPWAVIIPQL-ATPFGLYLMIIYAQTSIPVSLIEAAKLDGANTWTIFW 227

Query: 182 YLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQD 237
            +G P   PG V  ++ ++ G W  + +   M+   +      G+  ++   A    +  
Sbjct: 228 KVGFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLTNTNDYPLTVGLNMWLKMGAQGTSDGQ 287

Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260
           +   L    +++ V+ L    +F
Sbjct: 288 VPNNLIITGSLIAVVPLIIAFMF 310


>gi|283853671|ref|ZP_06370903.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio sp. FW1012B]
 gi|283570942|gb|EFC18970.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfovibrio sp. FW1012B]
          Length = 292

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
             ++ ++ A +L+ G + I        +    + ++   ++    +      T    L  
Sbjct: 27  LSSLVNMAALLLICGFLLIKGLPAISWSF---LTEMPRDSMTAGGILPCILGTIYLSLGT 83

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           M ++       A      A   R   ++   ++ +  +P + F  F + +F+  +    +
Sbjct: 84  MAVAFPLGVASAVYLNEYATPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFG---L 140

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           G  L +     +  V  +     + +L  +P+   E S     + WQ    + +P +MPG
Sbjct: 141 GVSLLSGILTLSILVLPVIIGTAEEALKAVPQTYREASLGLGATKWQTIRLVVLPAAMPG 200

Query: 192 LVWNMMMSMS 201
           ++   ++ +S
Sbjct: 201 MLTGAILGLS 210



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S ++++    ++CG  +     +I +       +D +    +    +   + L +    
Sbjct: 27  LSSLVNMAALLLICGFLLIKGLPAISWSFLTEMPRDSMTAGGI-LPCILGTIYLSLGTMA 85

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLW 451
           +  P+G+                  I+     LA  P+ VF    ++    ++ L  +L 
Sbjct: 86  VAFPLGVASAVYLNEYATPGRTLRLIRLGINNLAGVPSVVFGLFGLAFFVTFFGLGVSLL 145

Query: 452 LSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +      ++         A P  ++E +     T W+  R ++LP   P  +TGA
Sbjct: 146 SGILTLSILVLPVIIGTAEEALKAVPQTYREASLGLGATKWQTIRLVVLPAAMPGMLTGA 205

Query: 511 ITAC 514
           I   
Sbjct: 206 ILGL 209


>gi|261212045|ref|ZP_05926331.1| methionine ABC transporter permease protein [Vibrio sp. RC341]
 gi|260838653|gb|EEX65304.1| methionine ABC transporter permease protein [Vibrio sp. RC341]
          Length = 225

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 64/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           + L+   L     +T   +  A V+          +   +++        L  +L  I++
Sbjct: 10  VALNSDLLLTATWQTLYMVAIAGVVGFALGIPLGVILHTTKKDGLLENLPLNRILGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  VGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  ++   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGVVGFALGIPLGVILHTTKKDGLLENLPLNRILGAIVNVGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +       G +         +   
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH--------RYDIT 195

Query: 556 VLGVLIMCCFVLA 568
           ++ V ++   VL 
Sbjct: 196 IMAVTVVMLIVLV 208


>gi|332296834|ref|YP_004438756.1| phosphate ABC transporter, inner membrane subunit PstA [Treponema
           brennaborense DSM 12168]
 gi|332179937|gb|AEE15625.1| phosphate ABC transporter, inner membrane subunit PstA [Treponema
           brennaborense DSM 12168]
          Length = 559

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 68/163 (41%), Gaps = 6/163 (3%)

Query: 66  SRTTLRMLSAMVISL---LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T + ++  ++ S+   LF  VY    AK  RL  +L    + +  IP + F  F ++ 
Sbjct: 346 LNTLMMIVLTLLFSVPPGLFAAVYLVEYAKEGRLMQILRLGTETLAGIPSIIFGLFGMLI 405

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+  +   +    L+    +    +  +  +  ++L  +P  L+E S +   +  Q  + 
Sbjct: 406 FVQGFGWGI--CLLSGSLTLALMILPTVVRTAEEALKAVPHSLQEGSLALGGTKIQTIFR 463

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           + +P + P +   ++++         A+ +  +G +     G+
Sbjct: 464 VVLPAAFPSISAGIILATGRA-LGETAALIYTMGSSYNLAHGV 505



 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLV 437
           +   +++I++  +  +P G++             +   ++   + LA  P+ +F  F ++
Sbjct: 345 ILNTLMMIVLTLLFSVPPGLFAAVYLVEYAKEGRLMQILRLGTETLAGIPSIIFGLFGML 404

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +    +      L  SL +       ++        A P+  +E + +   T  +    +
Sbjct: 405 IFVQGFGWGICLLSGSLTLALMILPTVVRTAEEALKAVPHSLQEGSLALGGTKIQTIFRV 464

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +LP  FP    G I A G A      + + + G  +    G+
Sbjct: 465 VLPAAFPSISAGIILATGRA-LGETAALIYTMGSSYNLAHGV 505


>gi|261823744|ref|YP_003261850.1| binding-protein-dependent transporters inner membrane component
           [Pectobacterium wasabiae WPP163]
 gi|261607757|gb|ACX90243.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 214

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 15/199 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           ++ ++I LL             ++  V++ +  ++ +IP L          +       I
Sbjct: 25  ITPILIGLLLAIPVGWAVNSMPKVKGVILNLFGLLYTIPSLALF-----VLLPPLLNTQI 79

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +  + A+       +  ++   L ++  D  + + +      Q+FW + +P ++P +
Sbjct: 80  LDPINVVVALTIYSFALLVRTVCDGLDSVAEDTRQSAFALGFKPLQQFWQIDLPLAVPVI 139

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +          VV++  IV    +I  P +GS +    + Q L  I+ A++  + + 
Sbjct: 140 GSGLR-------VAVVSNVSIVSVAALIGAPQLGSLLTQGFQLQFLTPIIAAIVLCIALA 192

Query: 253 FLYDQL---LFRPMIVWSN 268
           F+ D L   + R +  W  
Sbjct: 193 FILDCLVVAITRSLSRWQP 211



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 67/180 (37%), Gaps = 8/180 (4%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           I+I  ++ IPVG  +   P +   I     LL   P+   F L+   ++   L+P   + 
Sbjct: 28  ILIGLLLAIPVGWAVNSMPKVKGVILNLFGLLYTIPSLALFVLLPPLLNTQILDPINVVV 87

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L I+ +   ++  V  G  +   D ++ A +      + +  I LP   P   +G   A
Sbjct: 88  ALTIY-SFALLVRTVCDGLDSVAEDTRQSAFALGFKPLQQFWQIDLPLAVPVIGSGLRVA 146

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
                +   V+ +            LG+ + +  +      ++  +++       L+  +
Sbjct: 147 VVSNVSIVSVAALIGAPQ-------LGSLLTQGFQLQFLTPIIAAIVLCIALAFILDCLV 199


>gi|218673374|ref|ZP_03523043.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           GR56]
          Length = 326

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 66/164 (40%), Gaps = 6/164 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + +  +SL+ +   A    + R  G   + ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTALSLVASVFGAYAIERVRFTGSRQIGLVIFLAYLIPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              + +P ++PGL+   + + +  W   + +   +       +P
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIP 249



 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 53/173 (30%), Gaps = 12/173 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            IG     I Y+    +Y   L+       TM   V    ++ +  +     I       
Sbjct: 72  VIGPTLDHIKYLFLETSYPGWLWN------TMLVAVGSTALSLVASVFGAYAIERVRFTG 125

Query: 416 SKIQPFAQLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAG 471
           S+       LA    P+ +F PL          +  L L              L      
Sbjct: 126 SRQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLLMGYF- 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             + P + +E A       W+    IILP   P  ++  I A   +WN  I +
Sbjct: 185 -RSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|192293489|ref|YP_001994094.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192287238|gb|ACF03619.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 596

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 65/529 (12%), Positives = 158/529 (29%), Gaps = 34/529 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F+ ++ +I+++   I   +       +  + L   SL     RT    ++   + LL
Sbjct: 34  FLGFIYLLPLIDLIRISISGPSWLTYFQRVFAVPLYWESL----VRTMQISVTVAFLCLL 89

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQS-----IPILGFLTFT----------VVYFMNL 126
           F +  A L  +++ L   L+    ++       I    ++             V   +  
Sbjct: 90  FGYPTALLIHRTQGLTRALIATAIVLPYFIAILIRTYAWMVLLGRTGPVNKLLVAIGILG 149

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
            P +++      +  +    +  M  ++Y S+  +   L   + +        FW + +P
Sbjct: 150 EPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAALASGAGPIAVFWRVLLP 209

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            ++PG+    ++       F +   ++      +    I         E  L A+   +L
Sbjct: 210 LTLPGIGAGFLLVFVAAIGFFITPTLLGGPGDQMFAMHITQQADSVTSEGFLQALGVVLL 269

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            +   +            +W  + +L  +       +      R++          W   
Sbjct: 270 LITLAVVAIAGRFLGLEFIWGGR-KLTESNAASTTSTAADDPTRRSIGSSLADTIGWPLL 328

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
             L      +      +        L L        ++ +  F     +       S+ +
Sbjct: 329 RLLGLLPAGVGTWTVRVMGGVVVAVLILP-----IVVVMVISFSSASYLTFPPPGFSLRW 383

Query: 367 IVNHFTYQDVLYVIW---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
               F+  + +   W   L  +    + V +   + + I  G   G    +   + P   
Sbjct: 384 YEQFFSDTNWMRAFWTSALIALVSAAIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPII- 442

Query: 424 LLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                P  V    L    + +  +     L+     G    ++  + A         ++ 
Sbjct: 443 ----VPPVVLGLSLYTLFLKFDLIGSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQA 498

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
           A+    +     R + LP I P        A   +++  +++   S   
Sbjct: 499 AAVHGASSLTVLRLVTLPAIAPGLAAATFFAFLHSFDELVLTLFLSSAQ 547


>gi|318078337|ref|ZP_07985669.1| maltose permease [Streptomyces sp. SA3_actF]
          Length = 252

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 89/238 (37%), Gaps = 10/238 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRMLSAMVIS 79
             +V      L  G  +   P  I+D + ++     L+      +   T +  L   ++ 
Sbjct: 1   MPVVWLAFLSLGPGKDDYLHPGRILDRLTLSNYSYVLEHTKFWDWLQSTLIVALGTTLLG 60

Query: 80  LLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           + F        ++ R      L+ +L + Q+ PI   +      F  L    +I +    
Sbjct: 61  VAFAATTGYAVSRMRFPGQRPLMWVLLLTQAFPIAVLIVPMYEIFSELG---LIDSYFGV 117

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I    T+ +    + +      IP +++E  R   LS +  FW L +P + PGL      
Sbjct: 118 ILLNCTTAIPYSAWLLKGYFDTIPFEIDEAGRIDGLSPFGTFWRLVLPLARPGLAVAAFY 177

Query: 199 SMSGGWFFVVASEMIVVGDTVIP-LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           +    W  V  +   ++ D       G+ ++++    + +L+A    ++ +   IF Y
Sbjct: 178 TFITAWAEVAFASTFLLDDEKYTFAVGLQTFVSEHDAQWNLMAATAVLIAVPVTIFFY 235


>gi|300814333|ref|ZP_07094605.1| phosphate ABC transporter, permease protein PstC [Peptoniphilus sp.
           oral taxon 836 str. F0141]
 gi|300511600|gb|EFK38828.1| phosphate ABC transporter, permease protein PstC [Peptoniphilus sp.
           oral taxon 836 str. F0141]
          Length = 303

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 17/224 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGFL 116
                T +  L    +S +     + +A+        +R+   L P L++M  IP + + 
Sbjct: 79  YGILSTVIGSLVITTVSCICAVPLSIMASSYLAFDCPKRIYKFLKPGLNLMAGIPSIVYG 138

Query: 117 TFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F +   + +      G     L+A   +    +  +      SL  +P+   E S S  
Sbjct: 139 FFALNIIVPINRAIFGGDGMNMLSASILLMIMVLPTIISMSEASLRTVPKSYYEGSLSLG 198

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP---LPGIGSY-- 228
            +  +    + +P +  G+   +++ +       +A  ++    T +    L GI +   
Sbjct: 199 ATHDETLTRVMIPAARSGIFAGVILGVGRAIGETMAVILVAGNQTRVTFNLLKGIRTMTT 258

Query: 229 ---IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              + +          L A   +L +  L   + F  M     K
Sbjct: 259 NIVMEMGYASGTHREALIATSAVLFIFILCINIGFFYMKKRGEK 302



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 15/170 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF---- 433
             T+   +V+  ++ I  +P+ I             I   ++P   L+A  P+ V+    
Sbjct: 82  LSTVIGSLVITTVSCICAVPLSIMASSYLAFDCPKRIYKFLKPGLNLMAGIPSIVYGFFA 141

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+  +      +N      LLMI      I+    A     P  + E + S   T
Sbjct: 142 LNIIVPINRAIFGGDGMNMLSASILLMIM-VLPTIISMSEASLRTVPKSYYEGSLSLGAT 200

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
                  +++P        G I   G A   ++   + +     +    L
Sbjct: 201 HDETLTRVMIPAARSGIFAGVILGVGRAIGETMAVILVAGNQTRVTFNLL 250


>gi|262164652|ref|ZP_06032390.1| phosphate transport system permease protein PstC [Vibrio mimicus
           VM223]
 gi|262027032|gb|EEY45699.1| phosphate transport system permease protein PstC [Vibrio mimicus
           VM223]
          Length = 291

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 13/218 (5%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---QYASRT 68
             RIF  +F   A + ++ +  I    ++E+    +   +  I L    LP      +  
Sbjct: 13  KERIFHGLFLTSAVIGIVSLAIIAYFIVRESIPAFEEAGLSGIVLGQDWLPPALYGVATM 72

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTF 118
            +  + +   +++       L A        +R+  V+ P ++++  IP + +    L  
Sbjct: 73  IVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVI 132

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V    N++        LA I  +    +  +      S+  +PR  +E S +   S   
Sbjct: 133 IVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASSIY 192

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
             + L VP +  G++  +++ +       +A  M++  
Sbjct: 193 TIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 230



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 15/181 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFR------PHISSKIQPFAQLLA 426
           QD L     G  TM    ++    ++I  +PVG+             ++  I+P  +LLA
Sbjct: 59  QDWLPPALYGVATMIVASIVSTFGAVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLA 118

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+ +  +    N  L   +++       ++        A P  
Sbjct: 119 GIPSVVYGFFGLVIIVPLIQNVFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 178

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +KE + +   +       +++P      +TG I   G A   ++   +       +    
Sbjct: 179 YKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGL 238

Query: 539 L 539
           L
Sbjct: 239 L 239


>gi|77463749|ref|YP_353253.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
 gi|77388167|gb|ABA79352.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 283

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 19/270 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             I R + P IF L   ++   ++  L         P  I   +  +L V  L     +T
Sbjct: 29  TRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIASSLPV--LWGDFVQT 86

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  LS  +I        A    +S  L   L+P+ + + ++PI+G     V++F   +
Sbjct: 87  FVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPILVMWFGFDW 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F +          +  + L    R   ++ +++  S  Q    L +P 
Sbjct: 147 QSKAAVVVVMVFFPV--------LVNTVEGLAATDRMQRDLMKTYSASYAQTLLKLRLPA 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY--AM 245
           +MP +   + ++ +      + +E         P+ G+G  I+  +    L  +    A+
Sbjct: 199 AMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWAEIAV 253

Query: 246 LTMLGVIFL-YDQLLFRPMIVWSNKFRLER 274
             M G  F     L+ R +  W    R +R
Sbjct: 254 AAMAGSAFYGVVALVERGLTFWHPSQRRQR 283



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 23/252 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFR 389
           +++  +      +       + G+ + + W+ +  G  V          +      ++  
Sbjct: 19  VRISRSAFSETRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIASSLPV 78

Query: 390 VVVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +    +   +     G  IG              P +   + P    +AA P     P++
Sbjct: 79  LWGDFVQTFVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPIL 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    +   +    + +++ F        N + G +A     +++  ++  +  +    +
Sbjct: 139 VMWFGFDWQSKAAVVVVMVFFPVL----VNTVEGLAATDRMQRDLMKTYSASYAQTLLKL 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P+   G   A   A   +IV+E            G+G  I+    +     V  
Sbjct: 195 RLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWA 249

Query: 558 GVLIMCCFVLAL 569
            + +      A 
Sbjct: 250 EIAVAAMAGSAF 261


>gi|313672089|ref|YP_004050200.1| binding-protein-dependent transport systems inner membrane
           component [Calditerrivibrio nitroreducens DSM 19672]
 gi|312938845|gb|ADR18037.1| binding-protein-dependent transport systems inner membrane
           component [Calditerrivibrio nitroreducens DSM 19672]
          Length = 241

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 95/236 (40%), Gaps = 16/236 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           IF ++ F+L+  + +           P  ++ ++  +++   L +    + LR+L    I
Sbjct: 5   IFLVILFLLIWEVASFFTESYI-LPGPFHVLKVIYQSINYD-LLKNTWSSLLRLLFGYTI 62

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           S++   + A  A K   +   +  I      +P + +LTF +++            +   
Sbjct: 63  SIITALILAITAQKYDIIKRSVSIISSSALKVPNIAYLTFFMLFVGVG--------DYTV 114

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  I  + +  +T S       + R + E+S  FR+  +++  +  +P  +      + +
Sbjct: 115 ILTIVVTLIPTITLSFLSVFDQLNRHVIEISDIFRVPFYRRALFFYIPSLVESFSSILSL 174

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           + S G+  ++ +E I   +      G+G  +       ++  ++  +L ++    L
Sbjct: 175 TFSLGFKLLIMAEFIAGTN------GLGYRLVEKKVSFNMDEVMAYILIIVISGIL 224


>gi|283954104|ref|ZP_06371629.1| LOW QUALITY PROTEIN: phosphate ABC transporter, permease protein
           PstC, putative [Campylobacter jejuni subsp. jejuni 414]
 gi|283794383|gb|EFC33127.1| LOW QUALITY PROTEIN: phosphate ABC transporter, permease protein
           PstC, putative [Campylobacter jejuni subsp. jejuni 414]
          Length = 666

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ML  MV+S+      A      A    L   +   ++ + SIP + F    +  F+
Sbjct: 450 TLLVMLVCMVVSVPMGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFI 509

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           NL+ G    + L     +    +  +  S   +L ++  +++  + +  ++  Q    + 
Sbjct: 510 NLF-GMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIM 568

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MP ++   +++++G 
Sbjct: 569 LPLAMPMILTGSILALAGA 587



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
             ++   ++++++  ++ +P+G+              ++  I+     LA+ P+ +F  L
Sbjct: 444 LSSVIGTLLVMLVCMVVSVPMGVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLL 503

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +         P        L +   +   I+ +  A   +   + K  A +  +T  + 
Sbjct: 504 GLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQM 563

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
            + I+LP   P  +TG+I A  GA
Sbjct: 564 VKGIMLPLAMPMILTGSILALAGA 587



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--------LTFT 119
           + + ML+A+ + ++        A K  +    L PIL+I+  IP + F          F 
Sbjct: 82  SLIAMLTALPLGVMCAIYLGVFAGKKSK--NYLKPILEIIAGIPTVVFGFFAAIVVAPFI 139

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V +F          + L A F +    V  +       +  +       + +  ++  + 
Sbjct: 140 VWFFSLFGIQASFQSALGAGFIMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEV 199

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGG 203
            + + +P ++PG+V   ++ +S  
Sbjct: 200 VFAVILPEAIPGIVAACLLGLSRA 223



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 26/171 (15%)

Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFP---- 429
           ++      +    + +IA +  +P+G+               + ++P  +++A  P    
Sbjct: 68  VFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGVFAGKKSKNYLKPILEIIAGIPTVVF 127

Query: 430 ----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV--- 482
               A V  P +V   S + +  +   +     G  + +   ++   ++   D  E    
Sbjct: 128 GFFAAIVVAPFIVWFFSLFGIQASFQSA----LGAGFIMGIMIVPIVASLSQDCIEAVSE 183

Query: 483 -----ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                A +  +T       +ILP   P  V   +     A   +++  +A+
Sbjct: 184 KRINGAYALGMTKKEVVFAVILPEAIPGIVAACLLGLSRALGETMIVVMAA 234


>gi|227432422|ref|ZP_03914411.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351825|gb|EEJ42062.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 294

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 14/186 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F +LAF+LV G+ ++  H +       +    + I L           +   ++ AM+I
Sbjct: 25  LFAMLAFILVQGVPHLSWHFLTSPARAFEAGGGIGIQL---------FNSFYLLILAMLI 75

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S       A      A+      ++   ++I+ S+P +    F  + F+  +  K+  + 
Sbjct: 76  SFPIALGAAIYLNEYAQKNHFTAIIRTAIEILSSLPSVVVGLFGFLLFVVQF--KLGFSI 133

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+   A+    +  +T S+  SL  IP    E   +  LS W+   ++  P ++P +V  
Sbjct: 134 LSGAIALTLFNLPLLTRSIETSLAQIPDLQREAGAALGLSRWETVLHVIFPAAVPSIVTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 VVLSAG 199



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 25/201 (12%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      +V  +   +    +   V H ++                 I +F    
Sbjct: 8   KIATGVIYAISGIVALILFAMLAFILVQGVPHLSWHFLTSPARAFEAGGGIGIQLFNSFY 67

Query: 393 LIIIASIIWIP--VGIWIGFRP-----HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           L+I+A +I  P  +G  I         H ++ I+   ++L++ P+     +VV    +  
Sbjct: 68  LLILAMLISFPIALGAAIYLNEYAQKNHFTAIIRTAIEILSSLPS-----VVVGLFGFLL 122

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYII 498
                 L   ++ G     LFN+     +            +E  ++  ++ W    ++I
Sbjct: 123 FVVQFKLGFSILSGAIALTLFNLPLLTRSIETSLAQIPDLQREAGAALGLSRWETVLHVI 182

Query: 499 LPGIFPYYVTGAITACGGAWN 519
            P   P  VTG + + G  + 
Sbjct: 183 FPAAVPSIVTGVVLSAGRVFG 203


>gi|300776923|ref|ZP_07086781.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300502433|gb|EFK33573.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 218

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQS 109
           +  L +    T      +     +       L   +R+            L  I++I ++
Sbjct: 7   IALLAKGTWETVYMTFLSGFFGFVLGLPVGILLFLTRKGQLLENTFYHRGLSIIVNIFRA 66

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++ F  +  G  IG   AA+  +       +   +  SL  +P  L E +
Sbjct: 67  IP-FIILIVWMIPFTRVLAGTSIGVN-AALVPLSVGAAPFIARLVENSLIEVPHGLIETA 124

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           R+   S  Q    + +P ++P L+ N  +++
Sbjct: 125 RALGASPLQIIRKVLLPEALPSLINNATITL 155



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPAN---VFF 434
           T++   +      ++ +PVGI +                 +     +  A P     V+ 
Sbjct: 17  TVYMTFLSGFFGFVLGLPVGILLFLTRKGQLLENTFYHRGLSIIVNIFRAIPFIILIVWM 76

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 ++   +  N  L  L + G   +I   V       P+   E A +   +  +  
Sbjct: 77  IPFTRVLAGTSIGVNAALVPLSV-GAAPFIARLVENSLIEVPHGLIETARALGASPLQII 135

Query: 495 RYIILPGIFPYYVTGAITACGG 516
           R ++LP   P  +  A      
Sbjct: 136 RKVLLPEALPSLINNATITLIT 157


>gi|54609890|gb|AAV35053.1| putative ABC transporter permease [Renibacterium salmoninarum]
          Length = 280

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 23/145 (15%)

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           RR    ++ + +I Q+ P +G +     +    +         AAI A+    V  +  +
Sbjct: 117 RRFSGPVIAVANIGQAAPAIGLVVLLAFWLGFGF--------WAAIVALVLYSVLPVLRN 168

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
               L  +   L E +R   ++       + +P ++P ++  +  ++           ++
Sbjct: 169 TMIGLGQVDGRLIEAARGMGMTPLSVLLRIELPLAVPVMLAGIRTAL-----------VL 217

Query: 214 VVGDTVIPLP----GIGSYIALAIK 234
           +VG   +       G+G  I   + 
Sbjct: 218 LVGTATLAAFVNGGGLGLLITTGVN 242



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 11/136 (8%)

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
           G     S  +   A +  A PA     L+   + +          + ++  +   +L N 
Sbjct: 114 GPFRRFSGPVIAVANIGQAAPAIGLVVLLAFWLGFGF----WAAIVALVLYSVLPVLRNT 169

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
           + G         E A    +T       I LP   P  + G  TA       + ++   +
Sbjct: 170 MIGLGQVDGRLIEAARGMGMTPLSVLLRIELPLAVPVMLAGIRTALVLLVGTATLAAFVN 229

Query: 529 WGHIHLRTTGLGAYIA 544
            G       GLG  I 
Sbjct: 230 GG-------GLGLLIT 238


>gi|156742497|ref|YP_001432626.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
 gi|156233825|gb|ABU58608.1| binding-protein-dependent transport systems inner membrane
           component [Roseiflexus castenholzii DSM 13941]
          Length = 217

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A++      +A+ IS+          A   R+G   + +   ++  P L  L     Y  
Sbjct: 23  ATQHLWISSAALAISIAAGLPLGIWTAHEARIGQWTINLFGALRLAPSLAVLFLVQPYLG 82

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                      + A+ A+    V  +  + Y  +  + R + E +R   ++  Q  W + 
Sbjct: 83  IG--------TMPALVALTLLAVPPVLIATYAGIRAVDRGVSEAARGMGMTAGQILWRVE 134

Query: 185 VPFSMPGLVWNMMMS 199
           +P ++P +V  +  +
Sbjct: 135 LPLALPSIVGGVRTA 149



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 4/128 (3%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++     + I+    +P+GIW      I          L   P+     LV   +    +
Sbjct: 27  LWISSAALAISIAAGLPLGIWTAHEARIGQWTINLFGALRLAPSLAVLFLVQPYLGIGTM 86

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
              + L+LL        +L    AG  A      E A    +T  +    + LP   P  
Sbjct: 87  PALVALTLL----AVPPVLIATYAGIRAVDRGVSEAARGMGMTAGQILWRVELPLALPSI 142

Query: 507 VTGAITAC 514
           V G  TA 
Sbjct: 143 VGGVRTAA 150


>gi|25027304|ref|NP_737358.1| putative sugar ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
 gi|259506557|ref|ZP_05749459.1| sugar ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
 gi|23492585|dbj|BAC17558.1| putative sugar ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
 gi|259165977|gb|EEW50531.1| sugar ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium efficiens YS-314]
          Length = 278

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 74/198 (37%), Gaps = 4/198 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNL 126
           + +  L+   ++++     A   A+    G  ++  + +  S+ P +  +T     F N+
Sbjct: 74  SLIVSLTTTALAVIVGVFTAYALARLDFPGKGIITGIILAASMFPGIALVTPLFQLFGNI 133

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                IG   A I    +  +    +++      +P +LEE +R    +  Q F  + +P
Sbjct: 134 G---WIGTYQALIIPNISFALPLTIYTLVSFFRQLPWELEEAARVDGATRGQAFRKILLP 190

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P L    +++    W   + +  +    T      I  +   +  E    +++ A  
Sbjct: 191 LAAPALFTTAILAFIASWNEFMLARQLSTTATEPVTVAIARFSGPSSFEYPYASVMAAGA 250

Query: 247 TMLGVIFLYDQLLFRPMI 264
            +   + +   +  R ++
Sbjct: 251 LVTVPLIIMVLIFQRRIV 268



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 2/194 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++   +    +A I+ +     +          I       + FP      PL     + 
Sbjct: 74  SLIVSLTTTALAVIVGVFTAYALARLDFPGKGIITGIILAASMFPGIALVTPLFQLFGNI 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     L +  I       ++ +++     P + +E A     T  + +R I+LP   
Sbjct: 134 GWIGTYQALIIPNISFALPLTIYTLVSFFRQLPWELEEAARVDGATRGQAFRKILLPLAA 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI A   +WN  +++   S       T  +  +   S+ +  +  V+    ++ 
Sbjct: 194 PALFTTAILAFIASWNEFMLARQLSTTATEPVTVAIARFSGPSSFEYPYASVMAAGALVT 253

Query: 564 CFVLALNRFLWHPL 577
             ++ +       +
Sbjct: 254 VPLIIMVLIFQRRI 267


>gi|332558030|ref|ZP_08412352.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides WS8N]
 gi|332275742|gb|EGJ21057.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides WS8N]
          Length = 449

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 6/159 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPIL 104
            D   +  +   L      +   M+  +V++L      +      A K+R   ++ V I 
Sbjct: 211 ADASEVRPEAAGLGVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIA 270

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + + ++P + F    +  F+N+         +  +       +  +  +   SL  +P  
Sbjct: 271 N-LAAVPSIVFGILGLAIFINMMGLPQSAPIVGGLILTL-MTLPTIIIATRVSLAAVPPS 328

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           + + +     S  Q  ++  +P ++PG++   ++ M+  
Sbjct: 329 IRDAALGVGASRMQAVFHHVLPLALPGILTGTIIGMARA 367



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     ++II  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIANLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++        P        L++   T   I+       +A P   ++ A     +  + 
Sbjct: 284 GLAIFINMMGLPQSAPIVGGLILTLMTLPTIIIATRVSLAAVPPSIRDAALGVGASRMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 VFHHVLPLALPGILTGTIIGMARA 367


>gi|296453490|ref|YP_003660633.1| binding-protein-dependent transporter inner membrane component
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296182921|gb|ADG99802.1| binding-protein-dependent transport systems inner membrane
           component [Bifidobacterium longum subsp. longum JDM301]
          Length = 325

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 71/216 (32%), Gaps = 6/216 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFA 422
              +     YQ   Y  WL    M+ VV     A+II    G  I          +    
Sbjct: 95  WQNVQETLAYQHGTYARWLLNTVMYAVVAGFG-ATIIATLAGYAIATMRFPGRNSLLAIT 153

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
               + PA V    +    S   L    W  ++    T + +   +I   ++ P    E 
Sbjct: 154 LAFMSIPATVISVPLFLMYSKIGLVGTPWAVIIPQLATPFGLYLMIIYAQTSVPTSLLEA 213

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGA 541
           A       W  +  +  P + P +VT  +    G W N  +   + S  + +  T GL  
Sbjct: 214 AKLDGANSWTIFWKVAFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLSDTNDYPMTVGLNM 273

Query: 542 YI---AESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574
           ++   AE T  G  P   +    +      +  F++
Sbjct: 274 WLKMGAEGTADGQIPNNYIVTGCLIAVAPLIIAFMF 309



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 9/203 (4%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T +  + A   + +   +     A  R      L+ I     SIP       +V 
Sbjct: 111 RWLLNTVMYAVVAGFGATIIATLAGYAIATMRFPGRNSLLAITLAFMSIPATV---ISVP 167

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+      ++G   A I     +  + +   +  +  ++P  L E ++    + W  FW
Sbjct: 168 LFLMYSKIGLVGTPWAVIIPQL-ATPFGLYLMIIYAQTSVPTSLLEAAKLDGANSWTIFW 226

Query: 182 YLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQD 237
            +  P   PG V  ++ ++ G W  + +   M+   +      G+  ++   A    +  
Sbjct: 227 KVAFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLSDTNDYPMTVGLNMWLKMGAEGTADGQ 286

Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260
           +         ++ V  L    +F
Sbjct: 287 IPNNYIVTGCLIAVAPLIIAFMF 309


>gi|284989220|ref|YP_003407774.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
 gi|284062465|gb|ADB73403.1| binding-protein-dependent transport systems inner membrane
           component [Geodermatophilus obscurus DSM 43160]
          Length = 240

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 82/224 (36%), Gaps = 10/224 (4%)

Query: 44  VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103
            P    D   +T +  ++  +  +     + A+++  L     A LA ++R L   ++  
Sbjct: 23  APNPWFDPSYVTDNWDTIVGHLGQHVRLTVGAVLLGALVALPLALLARRTRLLAGPVLGF 82

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
             ++ +IP L    F   +   L P       +  +  +    +  +  +    L  +P 
Sbjct: 83  SSVVYTIPSLALFAFLAPFTGALSP-------VTVLIGLTVYTLVILVRNFLAGLQGVPD 135

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           D+ E +R       + F  + +P ++P  +  + ++ +     +V   +I     +  L 
Sbjct: 136 DVREAARGMGYGPARLFLRVDLPLALPAFMAGLRIA-TVSTVALVTVGVITGNGGLGQLI 194

Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267
             G        E    A+   +L ++  + L    L R +  W+
Sbjct: 195 IGGLNANFYRAEIVTGAVGCVLLAVVADVLLA--GLERLLTPWT 236



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 3/104 (2%)

Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
               ++  +  F+ ++   P+   F  +        L+P   L  L ++ T   ++ N +
Sbjct: 71  RTRLLAGPVLGFSSVVYTIPSLALFAFLAPF--TGALSPVTVLIGLTVY-TLVILVRNFL 127

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           AG    P+D +E A        R +  + LP   P ++ G   A
Sbjct: 128 AGLQGVPDDVREAARGMGYGPARLFLRVDLPLALPAFMAGLRIA 171


>gi|254173753|ref|ZP_04880425.1| ABC transporter, permease protein, putative [Thermococcus sp. AM4]
 gi|214032445|gb|EEB73275.1| ABC transporter, permease protein, putative [Thermococcus sp. AM4]
          Length = 242

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 88/245 (35%), Gaps = 19/245 (7%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----DVLYVIWLGCITMFRVVVLIIIAS 398
            L +F F +   +A+   + ++  I            +  +     +T++      ++AS
Sbjct: 4   WLYLFLFALASWLALSYLYPALIPIPAETLAFYREVGLSLIFSSLLLTLYHSFSGFLVAS 63

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           ++     +   +       +      L +    V+  + +          +   ++L+  
Sbjct: 64  LLTGLAMLLALYSGAFRDFLNALNVFLQSVSVLVWTIVFIMLFGVT----SSIATILVTA 119

Query: 459 GTQWYILFNVIAGASAFPN---DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              +  L +  AG S+       ++ +      +  + +R+ I+PG  P  V+    A G
Sbjct: 120 MASFPALLS--AGVSSSEKVVEKYRPLIVLLKPSKLQLYRHFIVPGTLPEMVSAGRVALG 177

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
            A   S+V+E            G+G  +  S + G    V    L++   ++AL++ L  
Sbjct: 178 IALRISVVAEAFG------SAGGIGYQLVYSYDLGIKAGVFAWALLLIALMIALDQLLLR 231

Query: 576 PLYLY 580
            L  +
Sbjct: 232 RLEEW 236



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 13/194 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            S  +++ L T +   LA  S      L  +   +QS+ +L +    ++ F        +
Sbjct: 56  FSGFLVASLLTGLAMLLALYSGAFRDFLNALNVFLQSVSVLVWTIVFIMLFG-------V 108

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + +A I     +    +  +   S   +      +    + S  Q + +  VP ++P +
Sbjct: 109 TSSIATILVTAMASFPALLSAGVSSSEKVVEKYRPLIVLLKPSKLQLYRHFIVPGTLPEM 168

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           V    +++       V +E            GIG  +  +        +    L ++ ++
Sbjct: 169 VSAGRVALGIALRISVVAEAFGSAG------GIGYQLVYSYDLGIKAGVFAWALLLIALM 222

Query: 253 FLYDQLLFRPMIVW 266
              DQLL R +  W
Sbjct: 223 IALDQLLLRRLEEW 236


>gi|117618373|ref|YP_855457.1| D-methionine ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117559780|gb|ABK36728.1| D-methionine ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 217

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPILGFLTFT 119
           T + + ++ +   L           ++   ++  P+L+        + +S+P    L   
Sbjct: 16  TLIMVFASALFGCLLGLPLGVALHVTKAGQILANPLLNRTLGMVVNVGRSVP-FIILLVA 74

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++    L  G  IG  +AAI  +    +  +   +  +L  +P  L E +++      Q 
Sbjct: 75  IIPLTRLIVGTSIGT-IAAIVPLTVGCIPFIARLVEGALMEVPDGLLEAAKAMGAKPLQI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
              + +P ++PG++ ++ +++
Sbjct: 134 ITKVLLPEALPGILNSVTITL 154



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 12/147 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V    +   ++ +P+G+         I   P ++  +     +  + P  +   + 
Sbjct: 16  TLIMVFASALFGCLLGLPLGVALHVTKAGQILANPLLNRTLGMVVNVGRSVPFIILL-VA 74

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +  ++   +  ++     ++    G   +I   V       P+   E A +      +  
Sbjct: 75  IIPLTRLIVGTSIGTIAAIVPLTVGCIPFIARLVEGALMEVPDGLLEAAKAMGAKPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNAS 521
             ++LP   P  +           N S
Sbjct: 135 TKVLLPEALPGILNSVTITLVTLVNYS 161


>gi|23100927|ref|NP_694394.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22779162|dbj|BAC15428.1| ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 273

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 12/250 (4%)

Query: 22  LLAFVLVIGIINIL-----LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           L+ F  +   +  +     +    +       +      L    L +Y   + +  L   
Sbjct: 19  LVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTNRPLLRYMLNSFVVSLLTT 78

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLY-PGKVIGA 134
           V+SL F    A    +    G  L+  L +  S+ P +  ++       NL      +G 
Sbjct: 79  VLSLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIISPMFNLVTNLGLRNSYLGL 138

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +  I       +W    S +     IP +LEE ++    S +Q F  + +P + PG+  
Sbjct: 139 IIPYITISLPLAIW--ILSTF--FKKIPYELEESAKLDGASPFQTFRKIILPLATPGIFT 194

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             ++     W   + +  I   D    +P +G  +  +        I  A + +   I +
Sbjct: 195 TGILVFIAAWNEYLFALTINSDDQWRTVP-VGISMYQSEFSIPWGDISAATVIVTIPIVV 253

Query: 255 YDQLLFRPMI 264
              +  R ++
Sbjct: 254 LVLIFQRRIV 263



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 1/105 (0%)

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P + +E A     + ++ +R IILP   P   T  I     AWN  + +   +    
Sbjct: 159 KKIPYELEESAKLDGASPFQTFRKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQ 218

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
                 +G  + +S     + ++    +I+   ++ L       +
Sbjct: 219 WRTVP-VGISMYQSEFSIPWGDISAATVIVTIPIVVLVLIFQRRI 262


>gi|323140633|ref|ZP_08075557.1| phosphate ABC transporter, permease protein PstA
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414897|gb|EFY05692.1| phosphate ABC transporter, permease protein PstA
           [Phascolarctobacterium sp. YIT 12067]
          Length = 294

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 12/199 (6%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN---HFTYQDVLYVIWLGCITMFR 389
            +   + +  ++   ++CV     + +   ++  I+N    F++  V +         F 
Sbjct: 4   SIARAKFIDKLMTAVFYCVAGFFILLLVAFALYVIINGFKDFSWSLVSFEGSGIGNLFFN 63

Query: 390 VVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSC 440
            + L+ ++ ++ +P+G+  G            +  ++   + +++ P+ V   F  +V  
Sbjct: 64  TIYLVFLSLLVSVPMGVAAGIYMAEYAKQGKFTKFLRMCIETMSSLPSIVVGLFGYLVFI 123

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V           +L +   +   I+        + P  +K  + +   T W+    ++LP
Sbjct: 124 VMTGSQWNLFSGALAVSILSIPLIMTVTEDAFKSLPQGYKRGSLAMGATLWQTIYKVLLP 183

Query: 501 GIFPYYVTGAITACGGAWN 519
              P  +TG I A G  + 
Sbjct: 184 ACLPRIMTGVILAAGRGFG 202



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 71/199 (35%), Gaps = 7/199 (3%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV--PRDIVDIVPITLDVHSLPQYASRT 68
           I+R  F +      F  V G   +LL       +           ++ +   +      T
Sbjct: 5   IARAKFIDKLMTAVFYCVAGFFILLLVAFALYVIINGFKDFSWSLVSFEGSGIGNLFFNT 64

Query: 69  TLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              +  ++++S+          A   K  +    L   ++ M S+P +    F  + F+ 
Sbjct: 65  IYLVFLSLLVSVPMGVAAGIYMAEYAKQGKFTKFLRMCIETMSSLPSIVVGLFGYLVFIV 124

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           +   +      A   A+    +  +      +  ++P+  +  S +   + WQ  + + +
Sbjct: 125 MTGSQWNLFSGA--LAVSILSIPLIMTVTEDAFKSLPQGYKRGSLAMGATLWQTIYKVLL 182

Query: 186 PFSMPGLVWNMMMSMSGGW 204
           P  +P ++  ++++   G+
Sbjct: 183 PACLPRIMTGVILAAGRGF 201


>gi|293115720|ref|ZP_06604577.1| D-methionine ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
 gi|292808603|gb|EFF67808.1| D-methionine ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
          Length = 213

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 81/220 (36%), Gaps = 17/220 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQS 109
           + SL      T   ++ +   + +                  K++ +  +L  I ++++S
Sbjct: 2   IDSLKNGIFETLYMVVMSTAFAYIIGIPLGVALYITDKNGICKNKVVNFILGLITNLIRS 61

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP L  L   ++ F     G  IG   A I  +  S    +   +  SL  + + + E +
Sbjct: 62  IPFL-ILVVAIIPFTRAVVGTSIGPG-ATIVPLVISAAPFVARMVESSLNEVNQGVIEAA 119

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            +   S  Q  + + +P + P L+    ++++    +   +  +  G         G Y 
Sbjct: 120 LAMGSSKIQIIFKVLLPEAKPSLLLGGTITLATVLGYSAMAGFVGGGGLGAIAINYGYY- 178

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
                 +    I++  + ++ VI    QL  + +   ++K
Sbjct: 179 ------RYKKDIMWITVALIVVIVQIFQLAGQGIAKKTDK 212



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VV+    A II IP+G+         I     ++  +     L+ + P  +    +
Sbjct: 12  TLYMVVMSTAFAYIIGIPLGVALYITDKNGICKNKVVNFILGLITNLIRSIPFLILVVAI 71

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     V    + P   +  L+I    + +   V +  +       E A +   +  +  
Sbjct: 72  IPFTRAVVGTSIGPGATIVPLVISAAPF-VARMVESSLNEVNQGVIEAALAMGSSKIQII 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++LP   P  + G           S ++     G +       G Y
Sbjct: 131 FKVLLPEAKPSLLLGGTITLATVLGYSAMAGFVGGGGLGAIAINYGYY 178


>gi|282883263|ref|ZP_06291861.1| phosphate ABC transporter, permease protein PstC [Peptoniphilus
           lacrimalis 315-B]
 gi|281296893|gb|EFA89391.1| phosphate ABC transporter, permease protein PstC [Peptoniphilus
           lacrimalis 315-B]
          Length = 303

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 17/224 (7%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGFL 116
                T +  L    +S +     + +A+        +R+   L P L++M  IP + + 
Sbjct: 79  YGILSTVIGSLVITTVSCVCAVPLSIMASSYLAFDCPKRIYKFLKPGLNLMAGIPSIVYG 138

Query: 117 TFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F +   + +      G     L+A   +    +  +      SL  +P+   E S S  
Sbjct: 139 FFALNIIVPINRAIFGGDGMNMLSASILLMIMVLPTIISMSEASLRTVPKSYYEGSLSLG 198

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP---LPGIGSY-- 228
            +  +    + +P +  G+   +++ +       +A  ++    T +    L GI +   
Sbjct: 199 ATHDETLTRVMIPAARSGIFAGVILGVGRAIGETMAVILVAGNQTRVTFNLLKGIRTMTT 258

Query: 229 ---IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              + +          L A   +L +  L   + F  M     K
Sbjct: 259 NIVMEMGYASGTHREALIATSAVLFIFILCINIGFFYMKKRGEK 302



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 15/170 (8%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF---- 433
             T+   +V+  ++ +  +P+ I             I   ++P   L+A  P+ V+    
Sbjct: 82  LSTVIGSLVITTVSCVCAVPLSIMASSYLAFDCPKRIYKFLKPGLNLMAGIPSIVYGFFA 141

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P+  +      +N      LLMI      I+    A     P  + E + S   T
Sbjct: 142 LNIIVPINRAIFGGDGMNMLSASILLMIM-VLPTIISMSEASLRTVPKSYYEGSLSLGAT 200

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
                  +++P        G I   G A   ++   + +     +    L
Sbjct: 201 HDETLTRVMIPAARSGIFAGVILGVGRAIGETMAVILVAGNQTRVTFNLL 250


>gi|260577239|ref|ZP_05845214.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259020548|gb|EEW23869.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 285

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 67/179 (37%), Gaps = 7/179 (3%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            +I+ G IT+   ++  +I + + I + + I     +   + P+A      P     P++
Sbjct: 82  SLIYHGWITLSGTLLGFVIGTGLGILLAVGIVHNKAMDLSVMPWAIASQMIPIIAIAPML 141

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              ++    +  +  +++  + + + ++  ++ G  +      ++  ++          +
Sbjct: 142 AVVMNSLGASGIVTKAIISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSAGEATTLGKL 201

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
            LP   PY           +   +IV E+        +  GLGA +   +  G   ++ 
Sbjct: 202 RLPSSMPYLFASLKVGIAASLVGAIVGEL-------NQPAGLGARLLSGSYYGQTVQIW 253



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 4/157 (2%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
               SL  +   T    L   VI      + A     ++ + + ++P     Q IPI+  
Sbjct: 78  TSKKSLIYHGWITLSGTLLGFVIGTGLGILLAVGIVHNKAMDLSVMPWAIASQMIPIIAI 137

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
                V   +L    ++   + + +  F    + +   M + L +      ++ R++   
Sbjct: 138 APMLAVVMNSLGASGIVTKAIISAYLSF----FPVVVGMVKGLRSPDAMQLDLLRTYSAG 193

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
                  L +P SMP L  ++ + ++      +  E+
Sbjct: 194 EATTLGKLRLPSSMPYLFASLKVGIAASLVGAIVGEL 230


>gi|296141817|ref|YP_003649060.1| binding-protein-dependent transporters inner membrane component
           [Tsukamurella paurometabola DSM 20162]
 gi|296029951|gb|ADG80721.1| binding-protein-dependent transport systems inner membrane
           component [Tsukamurella paurometabola DSM 20162]
          Length = 214

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
            L     +    ++  ++ +++   V A    +SR    +   I  +  +IP L  L   
Sbjct: 13  QLAFLTYQHASLVIQCVLAAVVIALVLAAAVYRSRAGAAIATAIASVGMTIPSLALLALL 72

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F       V      A   I TS +          L  +P ++ E +R   +  W+ 
Sbjct: 73  LLVFGLGVAPSVTMLGFYATLPILTSAI--------VGLRAVPPNIVEAARGIGMPRWRV 124

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + +P + P ++  + +S       V  + ++      +  PG+GS I   +      
Sbjct: 125 LATVELPHAWPVILTGIRVS---TQLVVGVATVVA----YVLGPGLGSLIFSGLARLGGA 177

Query: 240 AILYAMLT 247
             L + LT
Sbjct: 178 GALESALT 185



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 11/154 (7%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V+  ++ A +I + +   +      ++     A +    P+     L+   +  + L   
Sbjct: 25  VIQCVLAAVVIALVLAAAVYRSRAGAAIATAIASVGMTIPSLA---LLALLLLVFGLGVA 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +++L  + T   IL + I G  A P +  E A    +  WR    + LP  +P  +TG
Sbjct: 82  PSVTMLGFYATL-PILTSAIVGLRAVPPNIVEAARGIGMPRWRVLATVELPHAWPVILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
              +       + V              GLG+ I
Sbjct: 141 IRVSTQLVVGVATVVAYVLG-------PGLGSLI 167


>gi|119946058|ref|YP_943738.1| ABC phosphate transporter inner membrane protein, PstA-like protein
           [Psychromonas ingrahamii 37]
 gi|119864662|gb|ABM04139.1| ABC phosphate transporter inner membrane protein, PstA-like protein
           [Psychromonas ingrahamii 37]
          Length = 451

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 8/139 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            +  M+I LL +F     AA          R   ++   ++ + ++P + F    +   +
Sbjct: 235 TILTMIIVLLISFPIGVSAALYLEEFAPKNRWTDIIEVNINNLAAVPSIVFGLLGLAVLI 294

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N++      + +  I       +  +  +   S+  +P  + E +     S  Q      
Sbjct: 295 NIFGLPRSASLVGGIVLSL-MTLPTIIIASRASIKAVPNSIREAAIGLGASDMQVALGHV 353

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 354 LPMAMPGILTGTIIGLAQA 372



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
           +   ++ +II  +I  P+G+               +  I+     LAA P+ VF  L ++
Sbjct: 232 LSGTILTMIIVLLISFPIGVSAALYLEEFAPKNRWTDIIEVNINNLAAVPSIVFGLLGLA 291

Query: 440 CVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            +      P   +L   +++   T   I+    A   A PN  +E A     +  +    
Sbjct: 292 VLINIFGLPRSASLVGGIVLSLMTLPTIIIASRASIKAVPNSIREAAIGLGASDMQVALG 351

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +LP   P  +TG I     A   +    +  
Sbjct: 352 HVLPMAMPGILTGTIIGLAQALGETAPLLMIG 383


>gi|83588986|ref|YP_428995.1| phosphate ABC transporter permease [Moorella thermoacetica ATCC
           39073]
 gi|83571900|gb|ABC18452.1| phosphate ABC transporter membrane protein 2, PhoT family [Moorella
           thermoacetica ATCC 39073]
          Length = 310

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 25/149 (16%)

Query: 76  MVISLLFTFVYATLAA-------------------KSRRLGMVLVPILDI----MQSIPI 112
           +V+S+LFT      A                    +S+R    L+  L++    + S+P 
Sbjct: 69  LVLSMLFTIPLGVGAGIYLAEYAGSGDVNPALALPRSKRATNYLLAALNLSIETLASLPS 128

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           +    F ++ F+            A    +    V  M     ++L  +PRDL+E S + 
Sbjct: 129 IVVGLFGLLVFVVSTGWGYSLMAGALALTVLNLPV--MVRISLEALQAVPRDLKEASLAL 186

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             S W+  W + +P + PGLV   +++  
Sbjct: 187 GASRWETIWKVVLPAAFPGLVTGGIITAG 215



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
              +L +    V   +  G  W  + +I       + L         +F    L++++ +
Sbjct: 18  AGIILVLLGVLVGYVLFKGGKWLDLAFITR---PPENLKAGGGVGPQLFNSFYLLVLSML 74

Query: 400 IWIPVGIWIGFR-----------------------PHISSKIQPFAQLLAAFPANV--FF 434
             IP+G+  G                          ++ + +    + LA+ P+ V   F
Sbjct: 75  FTIPLGVGAGIYLAEYAGSGDVNPALALPRSKRATNYLLAALNLSIETLASLPSIVVGLF 134

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L+V  VS       +  +L +       ++   +    A P D KE + +   + W   
Sbjct: 135 GLLVFVVSTGWGYSLMAGALALTVLNLPVMVRISLEALQAVPRDLKEASLALGASRWETI 194

Query: 495 RYIILPGIFPYYVTGAITACGGAWN 519
             ++LP  FP  VTG I   G  + 
Sbjct: 195 WKVVLPAAFPGLVTGGIITAGRVFG 219


>gi|18309621|ref|NP_561555.1| phosphate ABC transporter permease [Clostridium perfringens str.
           13]
 gi|169344719|ref|ZP_02865679.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens C str. JGS1495]
 gi|182625758|ref|ZP_02953526.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens D str. JGS1721]
 gi|18144298|dbj|BAB80345.1| probable phosphate ABC transporter [Clostridium perfringens str.
           13]
 gi|169297154|gb|EDS79269.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens C str. JGS1495]
 gi|177909020|gb|EDT71502.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens D str. JGS1721]
          Length = 274

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              IF +   V+++G I +   G    T     +           +      T   +L +
Sbjct: 15  LSAIFTIGILVIILGFIFVKGIGKINLT----FLTSNYSAGGGGGILPMIVTTLWTVLLS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + ++     + A      AK  ++   +    + +  IP + +  F  ++F+     K+ 
Sbjct: 71  LAVATPIGVLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVAL--KMG 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LA    +    +  +  +  ++L  +P    E S     + +Q  + + +P +MPG+
Sbjct: 129 YSILAGSLTVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----YIALAI----KEQDLLAILYA 244
           +  +++S+        A+ ++  G       GI S        A     ++ D+      
Sbjct: 189 LSGVILSIGRI-IGESAAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAV 247

Query: 245 MLTMLGVIFLYD 256
            + ++ +I   +
Sbjct: 248 GIVLIVIILALN 259



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 90/244 (36%), Gaps = 14/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + + I    +      GI   ++ ++ ++++      ++ +   T++ V++ + +A+ 
Sbjct: 17  AIFTIGILVIILGFIFVKGIGKINLTFLTSNYSAGGGGGILPMIVTTLWTVLLSLAVATP 76

Query: 400 IWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLV-VSCVSYYHLNPNLWLSLL 455
           I +   +++         ++      + LA  P+ V+     +  V    +  ++    L
Sbjct: 77  IGVLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVALKMGYSILAGSL 136

Query: 456 MIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +      ++           P  ++E +     T ++    +ILP   P  ++G I + 
Sbjct: 137 TVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGILSGVILSI 196

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGSFPEVVLGVLIMCCFV 566
           G     S  + + + G +     G+ +     T        EKG         +++   +
Sbjct: 197 GRIIGES-AAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAVGIVLIVII 255

Query: 567 LALN 570
           LALN
Sbjct: 256 LALN 259


>gi|323702460|ref|ZP_08114124.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532599|gb|EGB22474.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfotomaculum nigrificans DSM 574]
          Length = 294

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 9/203 (4%)

Query: 26  VLVIGIINILLHGIQETTVPRDI--VDIVPITLDVHS-LPQYASRTTLRMLSAMVISLLF 82
           ++VI ++ ++ + +       D   +   P  L     +      +   +   M+I++  
Sbjct: 20  LVVIILVGLIGYILYHGASSIDWSFITSPPQNLSPGGGVGPQIFNSFYLLFLTMLITVPV 79

Query: 83  TFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
             +     A+  + G V   I   ++ + S+P +    F ++ F+NL          A  
Sbjct: 80  GLLAGIYLAEFAKPGKVTESIRLSIETLTSLPSIVVGLFGLLIFVNLTGWGYSLMSGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  M     +++ N+P +L E S +   + WQ  W + +P +   ++   +++
Sbjct: 140 LTVINLPL--MVRISEEAIRNVPVELREGSLALGATRWQTVWKVVIPSAFLSILTGTIIT 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPL 222
            +G  F   A+ +   G +  PL
Sbjct: 198 -AGRVFGEAAALLFTAGMSSPPL 219



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 10/189 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
               L +     + G  +     SI +       Q++     +G   +F    L+ +  +
Sbjct: 16  AGAGLVVIILVGLIGYILYHGASSIDWSFITSPPQNLSPGGGVGPQ-IFNSFYLLFLTML 74

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNL 450
           I +PVG+  G           ++  I+   + L + P+ V   F L++           +
Sbjct: 75  ITVPVGLLAGIYLAEFAKPGKVTESIRLSIETLTSLPSIVVGLFGLLIFVNLTGWGYSLM 134

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +       ++          P + +E + +   T W+    +++P  F   +TG 
Sbjct: 135 SGALALTVINLPLMVRISEEAIRNVPVELREGSLALGATRWQTVWKVVIPSAFLSILTGT 194

Query: 511 ITACGGAWN 519
           I   G  + 
Sbjct: 195 IITAGRVFG 203


>gi|260221660|emb|CBA30446.1| hypothetical protein Csp_C23590 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 287

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 10/239 (4%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             ++ + +       + +FW  +V  + +         ++          +      T+ 
Sbjct: 34  SRWVGMATAALFGAWVVLFWEILVRALDVPRVLLPAPSLIIGSLGDHAPKLWGDFVQTVG 93

Query: 389 R-VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           + V++   +       V + I   P +   + P A L +A P     P+ V    +   +
Sbjct: 94  KAVLIGWAMGCGAGFLVAVAIDRMPFLQRGLLPVASLTSAIPLVGVAPIAVMWFGFEWPS 153

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
                + +++  T + +L + +AG  A     +E+  S+  +  R    + LP   P+  
Sbjct: 154 K----AAVVVLMTFFPMLVSTLAGLQAAGKLERELMYSYAASYPRTLLALRLPAALPFIF 209

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
                    A   +IV+E          T+GLG  I+    + + P V   +++     
Sbjct: 210 GALKVNATLALIGAIVAEFFGS-----PTSGLGFRISTEAARMNMPLVWGAIVVAAVTG 263



 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 16/203 (7%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L    +     F+ A    +   L   L+P+  +  +IP++G     V++F   +P K 
Sbjct: 96  VLIGWAMGCGAGFLVAVAIDRMPFLQRGLLPVASLTSAIPLVGVAPIAVMWFGFEWPSKA 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                     +     + M  S    L    +   E+  S+  S  +    L +P ++P 
Sbjct: 156 A--------VVVLMTFFPMLVSTLAGLQAAGKLERELMYSYAASYPRTLLALRLPAALPF 207

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG- 250
           +   + ++ +      + +E         P  G+G  I+      ++  +  A++     
Sbjct: 208 IFGALKVNATLALIGAIVAEFFGS-----PTSGLGFRISTEAARMNMPLVWGAIVVAAVT 262

Query: 251 --VIFLYDQLLFRPMIVWSNKFR 271
             V +     L R    W    R
Sbjct: 263 GSVAYALLVALERRAAFWHPSVR 285


>gi|256824560|ref|YP_003148520.1| phosphate ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256687953|gb|ACV05755.1| phosphate ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 326

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 30/271 (11%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+A  L +  I +L+          +I D     L  + L      + + M+ A+ +++ 
Sbjct: 54  LIAVTLALVAIFLLMEAWPALKQASEIGDEGFWMLAANLLGGTLLASAIAMVIAVPVAVG 113

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPI--------LGFLTFTVVYF---------- 123
                +  A    RL   +  ++D++ +IP         L F  F V  F          
Sbjct: 114 IALFISHYA--PPRLSKSIAFVIDLLAAIPSVIFGLWGYLTFAPFLVPLFEWLEDNLGFI 171

Query: 124 -MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            +     +     L A   +    +  +T         +PR  EE S +   + W+    
Sbjct: 172 PLFEDASRTGRVLLTASIVLAIMILPIITSVARDVFQQVPRGHEEASLALGATKWEMIKQ 231

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLA 240
             +PF  PG+V   M+ +       +A  MI+    +    + G G++   A    +   
Sbjct: 232 AVLPFGWPGVVGGAMLGLGRALGETMAVAMILAPKDEFQWNIIGSGNFPIPAYIALNFPD 291

Query: 241 I-------LYAMLTMLGVIFLYDQLLFRPMI 264
                   L A+  +L V+ L   L+ R ++
Sbjct: 292 ATGLKVSTLIALGLVLFVLTLAVNLVARAIV 322



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 88/261 (33%), Gaps = 28/261 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
            S  L      +V    +  AW ++            +    L   T+    + ++IA  
Sbjct: 50  GSGALIAVTLALVAIFLLMEAWPALKQASEIGDEGFWMLAANLLGGTLLASAIAMVIAVP 109

Query: 400 IWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPN 449
           + + + ++I     P +S  I     LLAA P+ +F         P +V    +   N  
Sbjct: 110 VAVGIALFISHYAPPRLSKSIAFVIDLLAAIPSVIFGLWGYLTFAPFLVPLFEWLEDNLG 169

Query: 450 --------------LWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWW 494
                         L  + +++      I+ +V        P   +E + +   T W   
Sbjct: 170 FIPLFEDASRTGRVLLTASIVLAIMILPIITSVARDVFQQVPRGHEEASLALGATKWEMI 229

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR--TTGLGAYIAESTEKGSF 552
           +  +LP  +P  V GA+   G A   ++   +        +    G G +   +    +F
Sbjct: 230 KQAVLPFGWPGVVGGAMLGLGRALGETMAVAMILAPKDEFQWNIIGSGNFPIPAYIALNF 289

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
           P+   G+ +     L L  F+
Sbjct: 290 PD-ATGLKVSTLIALGLVLFV 309


>gi|167836567|ref|ZP_02463450.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 224

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  + +      + L L  +      I  + IAG    P D  
Sbjct: 64  VVHIGQTFPPVAVLALAVPAIGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 119

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++G +   +I LP  FP  + G   A        +++   +     +   GLG
Sbjct: 120 DAARGMGMSGLQRLAWIELPLAFPVILNGIRLA-------VVINLGTATIGSTVAAKGLG 172

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G L++    + +
Sbjct: 173 DVIIAGLQTANTAFVLQGGLVVALLAVLI 201



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 59/161 (36%), Gaps = 15/161 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V   ++ I Q+ P +  L   V                  + A+    +  +  S    L
Sbjct: 60  VARSVVHIGQTFPPVAVLALAVPAIGFGV--------KPVLIALILYGLLPIFESTIAGL 111

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++P D  + +R   +SG Q+  ++ +P + P ++  + ++       VV +       +
Sbjct: 112 QDVPADAVDAARGMGMSGLQRLAWIELPLAFPVILNGIRLA-------VVINLGTATIGS 164

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +   G+G  I   ++  +   +L   L +  +  L    L
Sbjct: 165 TVAAKGLGDVIIAGLQTANTAFVLQGGLVVALLAVLIYDAL 205


>gi|45358660|ref|NP_988217.1| phosphate ABC transporter inner membrane protein [Methanococcus
           maripaludis S2]
 gi|45047526|emb|CAF30653.1| Binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis S2]
          Length = 288

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 79/210 (37%), Gaps = 12/210 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++ +V + GI  I +      + P +++     + D   +      T   ++ ++++S+ 
Sbjct: 32  IVGYVFINGIGAINMEFFFGDSNPINVILGFERSFD--GIWNSIIGTLALVVLSILLSIP 89

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           F  + A      A   +L   +    D +  +P + F  F     +      ++   L  
Sbjct: 90  FGVLGAIYLHEYASDNKLTQAIRFSSDSLAGLPSIVFGIFGYALAIKTVGPSLLIGGLTL 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +       +  +  + L ++   L E S +   + WQ    + +P ++P ++  +++
Sbjct: 150 SFMVLPI----IMRATEEGLKSVAPGLREGSLALGATKWQTITKVVIPSALPQMITGIIL 205

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           +M        A+ M           GIG +
Sbjct: 206 AMGRS-AEETAAIMFTAATAFS--FGIGLF 232



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP------ANVFFPLVVS 439
           ++   + L++++ ++ IP G+      H  +      Q +           ++ F +   
Sbjct: 72  SIIGTLALVVLSILLSIPFGVLGAIYLHEYASDNKLTQAIRFSSDSLAGLPSIVFGIFGY 131

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
            ++   + P+L +  L +      I+      G  +     +E + +   T W+    ++
Sbjct: 132 ALAIKTVGPSLLIGGLTLSFMVLPIIMRATEEGLKSVAPGLREGSLALGATKWQTITKVV 191

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           +P   P  +TG I A G    ++  +    +      + G+G +
Sbjct: 192 IPSALPQMITGIILAMG---RSAEETAAIMFTAATAFSFGIGLF 232


>gi|253988149|ref|YP_003039505.1| DL-methionine permease [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779599|emb|CAQ82760.1| d-methionine transport permease protein meti [Photorhabdus
           asymbiotica]
          Length = 217

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T +    +     +       L          +S +L   L  I++I +SIP 
Sbjct: 9   LVKGVWETLVMTFVSGFFGFIIGLPIGVLLYVTRPGQIMESNKLYRFLSAIVNIFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG + AAI  +       +   +  +L  IP  L E +R+ 
Sbjct: 68  FIILLVWMIPFTRLIMGTSIGLQ-AAIVPLTIGAAPFIARMVENALLEIPSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             + +Q    + +P ++P L+    +++
Sbjct: 127 GATPFQIVKKILLPEALPSLLNAATITL 154



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 12/183 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAA 427
           +L ++     T+    V      II +P+G+         I     +   +     +  +
Sbjct: 6   ILLLVKGVWETLVMTFVSGFFGFIIGLPIGVLLYVTRPGQIMESNKLYRFLSAIVNIFRS 65

Query: 428 FPA---NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            P     V+       +    +     +  L I G   +I   V       P+   E A 
Sbjct: 66  IPFIILLVWMIPFTRLIMGTSIGLQAAIVPLTI-GAAPFIARMVENALLEIPSGLIEAAR 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   T ++  + I+LP   P  +  A          S +      G +       G    
Sbjct: 125 AMGATPFQIVKKILLPEALPSLLNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYTGY 184

Query: 545 EST 547
            +T
Sbjct: 185 NAT 187


>gi|225022810|ref|ZP_03712002.1| hypothetical protein CORMATOL_02855 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944417|gb|EEG25626.1| hypothetical protein CORMATOL_02855 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 618

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 15/227 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L           +L      T V  D +    +     +L +   R+    L A +I++L
Sbjct: 2   LAVLAFFGCAFLLLPLAALATRVSWDTLGNTLLEPATETLLEITLRSA---LYATIITVL 58

Query: 82  FTFVYATLAAKSRRLGMVLVPILDI-MQSIPILGFLTFTVVYFMNLYPGKVI-------- 132
                A +  + RR   ++  ++ + +   P++  L+ T +         ++        
Sbjct: 59  IGVPMAIMLQRLRRGSQLVRILILLPLAMPPVVAGLSLTALLGRRGITAPILNALELQFA 118

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            A    + A     +  +  ++  +L  I R++ + +    +S WQ  W + +P   P +
Sbjct: 119 FAFAGVVVAHIFIALPFVVITVDAALRQIDREVFDSAAGIGMSPWQVLWRITLPTLRPAI 178

Query: 193 VWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           V    ++   S G F    +    +  T   +P IG Y+A      D
Sbjct: 179 VTGTGLAFVRSLGEFGTTLTFAGSLPGTTRTMP-IGIYLARETDPTD 224



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 13/145 (8%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L  IT+   +   II  +I +P+ I +      S  ++    L  A P  V    + + +
Sbjct: 41  LLEITLRSALYATIITVLIGVPMAIMLQRLRRGSQLVRILILLPLAMPPVVAGLSLTALL 100

Query: 442 SYYHLNPNLWLSLLM-------------IFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               +   +  +L +             IF    +++  V A       +  + A+   +
Sbjct: 101 GRRGITAPILNALELQFAFAFAGVVVAHIFIALPFVVITVDAALRQIDREVFDSAAGIGM 160

Query: 489 TGWRWWRYIILPGIFPYYVTGAITA 513
           + W+    I LP + P  VTG   A
Sbjct: 161 SPWQVLWRITLPTLRPAIVTGTGLA 185


>gi|163743306|ref|ZP_02150687.1| phosphate ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383494|gb|EDQ07882.1| phosphate ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 451

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 61/180 (33%), Gaps = 4/180 (2%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           LV  ++   +             D      +   +      +   ML  + ++L      
Sbjct: 190 LVDALVAAEVAAKTFNLDFITGADASDARPEAAGMGVSMMGSLFMMLVVLALALPIGVAA 249

Query: 87  ATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
           +      A    +  V+   +  + ++P + F    +  F+N      + A L     + 
Sbjct: 250 SIYLEEFAPKNWITDVIEVNISNLAAVPSIVFGILGLAVFINYM-HLPMSAPLVGGLVLT 308

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +  S   SL ++P  + + +     S  Q  ++  +P + PG++   ++ ++  
Sbjct: 309 LMTLPTVIISTRASLKSVPPSIRDAALGVGASRMQAVFHHVLPLAAPGILTGTIIGLAQA 368



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              I+  I+     LAA P+ VF  
Sbjct: 224 MGVSMMGSLFMMLVVLALALPIGVAASIYLEEFAPKNWITDVIEVNISNLAAVPSIVFGI 283

Query: 436 LVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++      +  ++  L   L++   T   ++ +  A   + P   ++ A     +  +
Sbjct: 284 LGLAVFINYMHLPMSAPLVGGLVLTLMTLPTVIISTRASLKSVPPSIRDAALGVGASRMQ 343

Query: 493 WWRYIILPGIFPYYVTGAITACGGA 517
              + +LP   P  +TG I     A
Sbjct: 344 AVFHHVLPLAAPGILTGTIIGLAQA 368


>gi|327439708|dbj|BAK16073.1| ABC-type phosphate transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 304

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 6/160 (3%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY---F 123
            T   ++  + I LL     A +A KS  +  ++ P + ++  IP + +  F +     F
Sbjct: 92  ATIGALVIGVPIGLLTAIFLAEIAPKS--VAKIVSPAIQLLAGIPSVLYGVFGLAIIVPF 149

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +    G   G  L A+  +    +     ++ + ++  +P+   E S +  +S     + 
Sbjct: 150 LQDNLGLARGQSLIAVILVLAIMMLPTIVTVAETAIRAVPKTYREGSLALGVSQIGTIFK 209

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + VP +  G++  +++ +       +A  ++     VIP 
Sbjct: 210 VVVPAAKSGIMAAIVLGLGRALGETMAVILVAGNSLVIPT 249



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 75/209 (35%), Gaps = 18/209 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +F+      V  G ++    +  +    +D   +  +   +++      I A +I +
Sbjct: 46  VGFVFYKGANPFVTGGYSFFDFLFGSDWVPSEDKFGIFPMIVASIY----ATIGALVIGV 101

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPN 449
           P+G+             ++  + P  QLLA  P+ ++    ++ +  +           +
Sbjct: 102 PIGLLTAIFLAEIAPKSVAKIVSPAIQLLAGIPSVLYGVFGLAIIVPFLQDNLGLARGQS 161

Query: 450 LWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
           L   +L++       +  V      A P  ++E + +  ++       +++P      + 
Sbjct: 162 LIAVILVLAIMMLPTIVTVAETAIRAVPKTYREGSLALGVSQIGTIFKVVVPAAKSGIMA 221

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTT 537
             +   G A   ++   + +   + + T+
Sbjct: 222 AIVLGLGRALGETMAVILVAGNSLVIPTS 250


>gi|320352742|ref|YP_004194081.1| PhoT family phosphate ABC transporter membrane protein 2
           [Desulfobulbus propionicus DSM 2032]
 gi|320121244|gb|ADW16790.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 422

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           T+  L  + ++L+ +F     AA        K+R    ++   ++ + +IP + F    +
Sbjct: 204 TMGSLFTLAVTLVLSFPVGVAAAVYLEEFAPKNRW-TDLIEVNINNLAAIPSIVFGLLGL 262

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F+N + G    + L     +    +  +  +   SL ++P  + E +     S  Q  
Sbjct: 263 AVFLN-FLGLPRSSSLVGGLVLTLMTLPTIIIASRASLKSVPPSIREAALGVGASKMQTI 321

Query: 181 WYLGVPFSMPGLVWNMMMSMSGG 203
            +  +P ++PG++   ++ M+  
Sbjct: 322 AHHVLPLALPGMMTGAIIGMARA 344



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 74/201 (36%), Gaps = 6/201 (2%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
             S +R+S     +   ++    +   + +  +        ++  +      ++F + V 
Sbjct: 155 PESERRISDQQAAWIDRLIEAGRLEQRFNAAFFQAGDSREPELAGIRGATMGSLFTLAVT 214

Query: 394 IIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP-- 448
           ++++  + +   +++     +   +  I+     LAA P+ VF  L ++    +   P  
Sbjct: 215 LVLSFPVGVAAAVYLEEFAPKNRWTDLIEVNINNLAAIPSIVFGLLGLAVFLNFLGLPRS 274

Query: 449 -NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
            +L   L++   T   I+    A   + P   +E A     +  +   + +LP   P  +
Sbjct: 275 SSLVGGLVLTLMTLPTIIIASRASLKSVPPSIREAALGVGASKMQTIAHHVLPLALPGMM 334

Query: 508 TGAITACGGAWNASIVSEVAS 528
           TGAI     A   +    +  
Sbjct: 335 TGAIIGMARALGETAPLLMIG 355


>gi|229006612|ref|ZP_04164247.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
 gi|228754661|gb|EEM04071.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
          Length = 288

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 77/186 (41%), Gaps = 9/186 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVD--IVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            +  I I+ +LL+ I E  +    +D  +   + +       A+ +   +  ++V+ + F
Sbjct: 31  MLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPKQAGIAAALSGTIVFMSIVVPVSF 90

Query: 83  TFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F   T       A+      ++   +  +  +P + F    +  F+     ++  + + 
Sbjct: 91  IFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVVFGLLGLTIFVYGL--QLGESIVT 148

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A F +    +  +  S  +++  +P  L E S     + WQ  + + VP ++PG++   +
Sbjct: 149 AAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATKWQTMYQIVVPTALPGILTGCV 208

Query: 198 MSMSGG 203
           +++S  
Sbjct: 209 LALSRA 214



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 11/207 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            I+ +    F +    + +SYM  +F  C++  +   I  + I Y+   F          
Sbjct: 8   RIKENMATRFWKDQIYKSISYMTMLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPK 67

Query: 382 LGCI------TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANV 432
              I      T+  + +++ ++ I  +   +++     +   +  ++   Q LA  P+ V
Sbjct: 68  QAGIAAALSGTIVFMSIVVPVSFIFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVV 127

Query: 433 F--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           F    L +           +  +  M       ++ +        P+   E +     T 
Sbjct: 128 FGLLGLTIFVYGLQLGESIVTAAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATK 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGA 517
           W+    I++P   P  +TG + A   A
Sbjct: 188 WQTMYQIVVPTALPGILTGCVLALSRA 214


>gi|254476931|ref|ZP_05090317.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
 gi|214031174|gb|EEB72009.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
          Length = 541

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 43/217 (19%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF----- 118
            RT L  L+  V  ++  +  A + A   SR   ++++           L  L F     
Sbjct: 322 LRTLLMSLAITVSCIVLGYPVAWILANLPSRTANLLMI-----------LVLLPFWTSLL 370

Query: 119 ------------------TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQS 157
                             T+V+   +       +I  +   I A+    +  M   MY  
Sbjct: 371 VRTSAWKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSV 430

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  I       ++S   + W  FW +  P S+PG+    ++       + +  E++    
Sbjct: 431 MQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTK 490

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            V     I + IA  I +     +  A+ ++L V+ L
Sbjct: 491 GVF----ISNRIAFHISQSLNWGLAAALGSILLVVVL 523



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 42/138 (30%), Gaps = 4/138 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +        +   A S   T 
Sbjct: 390 LVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSLGATN 449

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I++S   G
Sbjct: 450 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNWG 509

Query: 551 SFPEVVLGVLIMCCFVLA 568
               +   +  +   V+ 
Sbjct: 510 ----LAAALGSILLVVVL 523


>gi|239616684|ref|YP_002940006.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
 gi|239505515|gb|ACR79002.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
          Length = 804

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 12/140 (8%)

Query: 118 FTVVYFMNLYPGKVIGAELAA-IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            T+  F  +     +       +FAIF          + Q    IP +L + ++   +S 
Sbjct: 658 ITLTAFGWIDTYYALIVPWVVSVFAIFL---------LRQHFMTIPDELFDAAKIDGMSK 708

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKE 235
           W+  W + VP + P ++   ++   G W   +   ++        LP G+ ++ + A   
Sbjct: 709 WKFLWRIMVPLAKPAVITGALLKFVGSWNAFLWVLIVTKSPEYRTLPVGLQNF-SSATGT 767

Query: 236 QDLLAILYAMLTMLGVIFLY 255
           +  L +  A  +++ VI L+
Sbjct: 768 EYNLLMSAATFSIVPVIILF 787



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 2/98 (2%)

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
              P++  + A    ++ W++   I++P   P  +TGA+    G+WNA +   + +    
Sbjct: 691 MTIPDELFDAAKIDGMSKWKFLWRIMVPLAKPAVITGALLKFVGSWNAFLWVLIVTKSPE 750

Query: 533 HLRTT-GLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
           +     GL  + + +T       +      +   ++  
Sbjct: 751 YRTLPVGLQNF-SSATGTEYNLLMSAATFSIVPVIILF 787


>gi|120603262|ref|YP_967662.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563491|gb|ABM29235.1| amino acid ABC transporter membrane protein 1, PAAT family / amino
           acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 596

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 62/501 (12%), Positives = 155/501 (30%), Gaps = 39/501 (7%)

Query: 73  LSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           L +  ++L    V      +    L +    +++  ++ P+L  L F    F  + P  +
Sbjct: 69  LISSALALGLGTVLGIARLSLFAPLRLTATAVVEFFRNTPLLVQLFFWYFAFPAILPENI 128

Query: 132 IGAELAAIFAIFTSQVWN-------MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   F  + + +         M   +   L +IP+ L E + S  L+  Q    + 
Sbjct: 129 RELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTII 188

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLL-AI 241
           +P +   ++  +             SE +  +   ++  + G+      + + + L    
Sbjct: 189 LPMAFRAIIPPL------------GSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFKG 236

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI-GY 300
             A      +      L+   +   + K RL+          +V  +    + +R +   
Sbjct: 237 FEATSAATVLYLSLSLLISFILNGVNGKMRLDTAPKRSLPVMFVDAVLLPVSLIRRVFVR 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                             +  +             ++        +    ++   A G+ 
Sbjct: 297 PIGRALRRRRRAATSATYSPAMATMRVAMQMAGKGASLLCKGAFILALGGLLFVTARGLY 356

Query: 361 WQSIGYIVNHFTYQDVLYV-------IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
             + G I ++     + +        +++G   +   +++ +IA  +   +G+ +G    
Sbjct: 357 NFNWGVIADNLRTLLIWHFPNGQSDELFMGLGGLAYSLLMAVIAISVSFFIGLVVGIGRT 416

Query: 414 ISSKIQPF-----AQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             ++I         +L+   P      +    +  +     N     ++ +   T  Y+ 
Sbjct: 417 SDNRICRIPCLLYIELIRGNPLIIVIFWIYFFIPVLFNTFFNVFWSATIALTLFTGAYLA 476

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             V AG    P    E A S  +T  +  R IILP      +   +      +  + ++ 
Sbjct: 477 EIVRAGIQNIPAGQVEAAYSTGLTFVQTMRRIILPQALKQMIPAIVGQFIAIFKDTSLAF 536

Query: 526 VASWGHIHLRTTGLGAYIAES 546
           V     +     G+   +   
Sbjct: 537 VLGVLELTFVAQGINNRLMVY 557


>gi|255505278|ref|ZP_05345184.3| ABC-type sugar transport system, permease component [Bryantella
           formatexigens DSM 14469]
 gi|255269094|gb|EET62299.1| ABC-type sugar transport system, permease component [Bryantella
           formatexigens DSM 14469]
          Length = 236

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 3/215 (1%)

Query: 41  ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100
           +       +      L    +P+Y   T +   +A ++ ++         A+    G   
Sbjct: 6   QLLPAEPTLQAFVSVLTTTDIPRYFLNTIIVAGTATLLCIVIAVPAGYSFARHHYRGKNF 65

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160
           + +L ++ ++      +  V  +  L    ++  +LA  F      +      +   +  
Sbjct: 66  LMLLILLCNMVPQA--STLVPLYRTLNSTGLVDNKLALSFTHLLCMLPFSVIMIRGFIST 123

Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +PR LEE +     S     + + +P S PG+    M +    W   + S          
Sbjct: 124 LPRTLEEAAMIDGCSKIGILFRIVLPISAPGIFATAMYAFMISWEEFMYSMTFTTSKYSR 183

Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
            +  +G  +  +  + D  +IL + + M   I L 
Sbjct: 184 TIS-VGLQMFSSEFKTDWASILASSVMMAVPILLL 217



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 3/193 (1%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFP-ANVFFPL 436
           +      T+       ++  +I +P G       +     +     L    P A+   PL
Sbjct: 26  IPRYFLNTIIVAGTATLLCIVIAVPAGYSFARHHYRGKNFLMLLILLCNMVPQASTLVPL 85

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
             +  S   ++  L LS   +     + +  +    S  P   +E A     +       
Sbjct: 86  YRTLNSTGLVDNKLALSFTHLLCMLPFSVIMIRGFISTLPRTLEEAAMIDGCSKIGILFR 145

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+LP   P     A+ A   +W   + S +      + RT  +G  +  S  K  +  ++
Sbjct: 146 IVLPISAPGIFATAMYAFMISWEEFMYS-MTFTTSKYSRTISVGLQMFSSEFKTDWASIL 204

Query: 557 LGVLIMCCFVLAL 569
              ++M   +L L
Sbjct: 205 ASSVMMAVPILLL 217


>gi|110799373|ref|YP_695073.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens ATCC 13124]
 gi|168206754|ref|ZP_02632759.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens E str. JGS1987]
 gi|168211947|ref|ZP_02637572.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens B str. ATCC 3626]
 gi|168218153|ref|ZP_02643778.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens NCTC 8239]
 gi|110674020|gb|ABG83007.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens ATCC 13124]
 gi|170661867|gb|EDT14550.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens E str. JGS1987]
 gi|170710118|gb|EDT22300.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens B str. ATCC 3626]
 gi|182379842|gb|EDT77321.1| phosphate ABC transporter, permease protein PstA [Clostridium
           perfringens NCTC 8239]
          Length = 274

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              IF +   V+++G I I   G    T     +           +      T   +L +
Sbjct: 15  LSAIFTIGILVIILGFIFIKGIGKINLT----FLTSNYSAGGGGGILPMIVTTLWTVLLS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           + ++     + A      AK  ++   +    + +  IP + +  F  ++F+     K+ 
Sbjct: 71  LAVATPIGVLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVAL--KMG 128

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
            + LA    +    +  +  +  ++L  +P    E S     + +Q  + + +P +MPG+
Sbjct: 129 YSILAGSLTVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGI 188

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----YIALAI----KEQDLLAILYA 244
           +  +++S+        A+ ++  G       GI S        A     ++ D+      
Sbjct: 189 LSGVILSIGRI-IGESAAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAV 247

Query: 245 MLTMLGVIFLYD 256
            + ++ +I   +
Sbjct: 248 GIVLIVIILALN 259



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 90/244 (36%), Gaps = 14/244 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             + + I    +      GI   ++ ++ ++++      ++ +   T++ V++ + +A+ 
Sbjct: 17  AIFTIGILVIILGFIFIKGIGKINLTFLTSNYSAGGGGGILPMIVTTLWTVLLSLAVATP 76

Query: 400 IWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLV-VSCVSYYHLNPNLWLSLL 455
           I +   +++         ++      + LA  P+ V+     +  V    +  ++    L
Sbjct: 77  IGVLGAVYLQEYAKQGKMVKFIRFATESLAGIPSIVYGLFGGIFFVVALKMGYSILAGSL 136

Query: 456 MIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +      ++           P  ++E +     T ++    +ILP   P  ++G I + 
Sbjct: 137 TVSIIILPVIIRTTEEALKTVPESYREASLGLGATKFQTLYKVILPSAMPGILSGVILSI 196

Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGSFPEVVLGVLIMCCFV 566
           G     S  + + + G +     G+ +     T        EKG         +++   +
Sbjct: 197 GRIIGES-AAILLTAGTVAQMPKGIFSSARTLTVQAYLVTKEKGDIETAAAVGIVLIVII 255

Query: 567 LALN 570
           LALN
Sbjct: 256 LALN 259


>gi|73669285|ref|YP_305300.1| phosphate ABC transporter permease [Methanosarcina barkeri str.
           Fusaro]
 gi|72396447|gb|AAZ70720.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Methanosarcina barkeri str. Fusaro]
          Length = 296

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 14/211 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           V  +  I  F    G+ +      + ++   F Y   +   +      F  +++ + A +
Sbjct: 23  VVILFLICLFLFRDGLLLFKDTSLMDFLTGKFWYPTSINRQFGLLPLFFGSLIVTLGAIL 82

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYH 445
             +P+GI           P I+  ++PF ++LA  P+ VF         P++    +   
Sbjct: 83  FAVPLGIAAAIYISEIANPKIADFLKPFIEILAGIPSVVFGFFGLVVLVPIIQKSFNLPT 142

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  S+++       I+       S+ P   K  + +   T W+    +++P     
Sbjct: 143 GQTALTGSIMLGIMALPTIITISEDAISSVPGTLKHGSLALGATKWQTIYKVVVPAALSG 202

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRT 536
              G +   G A   ++   + +     + +
Sbjct: 203 ISAGVMLGIGRAMGETMTLMMVTGNTAVIPS 233



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 10/161 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
           L   + ++LF       AA       + ++   L P ++I+  IP + F    L   V  
Sbjct: 74  LIVTLGAILFAVPLGIAAAIYISEIANPKIADFLKPFIEILAGIPSVVFGFFGLVVLVPI 133

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +        L     +    +  +      ++ ++P  L+  S +   + WQ  + 
Sbjct: 134 IQKSFNLPTGQTALTGSIMLGIMALPTIITISEDAISSVPGTLKHGSLALGATKWQTIYK 193

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           + VP ++ G+   +M+ +       +   M+     VIP  
Sbjct: 194 VVVPAALSGISAGVMLGIGRAMGETMTLMMVTGNTAVIPSF 234


>gi|302338215|ref|YP_003803421.1| phosphate ABC transporter inner membrane subunit PstA [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635400|gb|ADK80827.1| phosphate ABC transporter, inner membrane subunit PstA [Spirochaeta
           smaragdinae DSM 11293]
          Length = 548

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S     + A      AK  R+  +L    + +  IP + F  F  ++F+ +    +    
Sbjct: 347 STPIGVLGAIYMVEYAKQGRVIRILRLGTETLAGIPSIVFGLFGFIFFVGMLGLGI--GF 404

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           ++A   +    +  +  +  ++L ++P    E S +   +  Q    + VP + PG++  
Sbjct: 405 ISATLTVTMMILPTIIRTSEEALKSVPLSFREGSLALGATKLQTIAKVVVPAATPGILTG 464

Query: 196 MMMSMS 201
           +++++ 
Sbjct: 465 IILAVG 470



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 413 HISSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA- 470
            +   ++   + LA  P+ VF     +  V    L      + L +       +      
Sbjct: 366 RVIRILRLGTETLAGIPSIVFGLFGFIFFVGMLGLGIGFISATLTVTMMILPTIIRTSEE 425

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
              + P  F+E + +   T  +    +++P   P  +TG I A G
Sbjct: 426 ALKSVPLSFREGSLALGATKLQTIAKVVVPAATPGILTGIILAVG 470


>gi|295093630|emb|CBK82721.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Coprococcus sp. ART55/1]
          Length = 334

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 13/199 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------DVHSLPQYAS 66
           R  P  F +  FV +  +I +L  G     V    +  +   +       D  SL     
Sbjct: 60  RKRPGSFIMFIFVHLATLITVLSIGFLLVYVLVKGIPNLNADIFSWEYTSDNCSLVPALI 119

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLTFTVVY 122
            T    L +++I+       A    +  + G  LV ++ I    +  IP + +  F +++
Sbjct: 120 NTVYMTLLSLLIAGPIGIFAAIYLVEYAKTGNKLVGVVRITAETLTGIPSIVYGLFGMLF 179

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F N    ++     A   AI    V  +  +  ++L  +P+   E S        +  + 
Sbjct: 180 FTNACGLRLSLISGALTLAIMVLPV--IMRTTEEALMAVPKSYREGSFGLGAGKLRTVFK 237

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           + +P ++PG++  ++++  
Sbjct: 238 VVLPSAVPGILSGIILATG 256



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 17/201 (8%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-------LGC 384
                 +  S+++ IF         + I +  +  +V      +     W          
Sbjct: 56  WAEYRKRPGSFIMFIFVHLATLITVLSIGFLLVYVLVKGIPNLNADIFSWEYTSDNCSLV 115

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPL 436
             +   V + +++ +I  P+GI+              +   ++  A+ L   P+ V+   
Sbjct: 116 PALINTVYMTLLSLLIAGPIGIFAAIYLVEYAKTGNKLVGVVRITAETLTGIPSIVYGLF 175

Query: 437 VVSCVSYY-HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
            +   +    L  +L    L +      ++         A P  ++E +        R  
Sbjct: 176 GMLFFTNACGLRLSLISGALTLAIMVLPVIMRTTEEALMAVPKSYREGSFGLGAGKLRTV 235

Query: 495 RYIILPGIFPYYVTGAITACG 515
             ++LP   P  ++G I A G
Sbjct: 236 FKVVLPSAVPGILSGIILATG 256


>gi|239918060|ref|YP_002957618.1| ABC-type proline/glycine betaine transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|281415759|ref|ZP_06247501.1| ABC-type proline/glycine betaine transport system, permease
           component [Micrococcus luteus NCTC 2665]
 gi|239839267|gb|ACS31064.1| ABC-type proline/glycine betaine transport system, permease
           component [Micrococcus luteus NCTC 2665]
          Length = 251

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 59/195 (30%), Gaps = 8/195 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              V+ L    +  V V   +     +P+G+        + +  P A  LA         
Sbjct: 49  WPTVLRLTAEHLALVGVSTALVVATAVPLGVL--LSRPAARRFTPVAMGLANAGQAAPVI 106

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
            V+  ++           L +       +L N +AG         E A    ++  +   
Sbjct: 107 GVIVLLAMAWGFGFRVAVLALSLYAFLPVLANTLAGLRGVDPTVVEAARGMGMSPLQTLL 166

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  + G  TA          +     G       GLG  I        FP +
Sbjct: 167 RVELPLALPVIMAGLRTALVLLVGTGAFATFIDAGG------GLGLLIQTGIVLFRFPLL 220

Query: 556 VLGVLIMCCFVLALN 570
           V G +++    L + 
Sbjct: 221 VSGAILVAALALMIE 235



 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 82/240 (34%), Gaps = 16/240 (6%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
           D L  + +  ++  LL G         + D+    L   ++ +  +     +  +  + +
Sbjct: 12  DRLLLIGLPLLVGALLIGWTVWVRGAALDDVEARLLTWPTVLRLTAEHLALVGVSTALVV 71

Query: 81  LFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                   L ++   RR   V + + +  Q+ P++G +    + +   +   V+   L A
Sbjct: 72  ATAVPLGVLLSRPAARRFTPVAMGLANAGQAAPVIGVIVLLAMAWGFGFRVAVLALSLYA 131

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +          +    L  +   + E +R   +S  Q    + +P ++P ++  +  
Sbjct: 132 FLPVLA--------NTLAGLRGVDPTVVEAARGMGMSPLQTLLRVELPLALPVIMAGLRT 183

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           ++      V+          +    G+G  I   I       ++   + +  +  + + +
Sbjct: 184 AL------VLLVGTGAFATFIDAGGGLGLLIQTGIVLFRFPLLVSGAILVAALALMIEWI 237


>gi|319781151|ref|YP_004140627.1| phosphate ABC transporter inner membrane subunit PstA
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167039|gb|ADV10577.1| phosphate ABC transporter, inner membrane subunit PstA
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 438

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              MVI LL        A       AK  R   ++   ++ + ++P + F    +  F+N
Sbjct: 224 FYMMVIVLLLALPIGVAASIYLEEFAKKNRFTDLIEVNINNLAAVPSIVFGLLGLAVFIN 283

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   A +  +       +  +  +   +L  +P  +   +     S  Q  +   +
Sbjct: 284 FLGMPRSAAFVGGLVLTL-MTLPTIIIATRAALAAVPPSIRSAALGLGASKMQMVFQHIL 342

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P + PG++   ++ ++  
Sbjct: 343 PLAAPGILTGTIIGLARA 360



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++I  ++ +P+G+               +  I+     LAA P+ VF  L ++    
Sbjct: 224 FYMMVIVLLLALPIGVAASIYLEEFAKKNRFTDLIEVNINNLAAVPSIVFGLLGLAVFIN 283

Query: 444 YHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P        L++   T   I+    A  +A P   +  A     +  +     ILP
Sbjct: 284 FLGMPRSAAFVGGLVLTLMTLPTIIIATRAALAAVPPSIRSAALGLGASKMQMVFQHILP 343

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG I     A
Sbjct: 344 LAAPGILTGTIIGLARA 360


>gi|300932477|ref|ZP_07147733.1| phosphate ABC transport system, permease protein [Corynebacterium
           resistens DSM 45100]
          Length = 304

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T  ++L   ++S+      A      +    LG +   ++DI+  +P +    F    ++
Sbjct: 90  TLTQVLVTSLLSVPIGVFTAVYLVEYSNGNFLGRITTFMVDILTGVPSIVAALFVYAMWI 149

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            ++     G   A   A+    +  +  +  + L  +P DL E S +  +  W+  + + 
Sbjct: 150 TMFGFDRSG--FAVAIALVLLMIPIIVRNTEEMLRIVPMDLREASYALGVPKWKTIFKIV 207

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++ G+V  +M++++
Sbjct: 208 LPTALSGIVTGVMLAVA 224



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 75/230 (32%), Gaps = 13/230 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIAS 398
           ++ ++ +    V+ G+ + +      + +           I    I T+ +V+V  +++ 
Sbjct: 43  LAPLVWVIANVVIKGLPVVLDSNWWAFDMAGQPNSKPGGGISHAIIGTLTQVLVTSLLSV 102

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYYHLNPNLWLS 453
            I +   +++        +         +L   P+     F   +    +        ++
Sbjct: 103 PIGVFTAVYLVEYSNGNFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFDRSGFAVA 162

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           + ++      I+ N        P D +E + +  +  W+    I+LP      VTG + A
Sbjct: 163 IALVLLMIPIIVRNTEEMLRIVPMDLREASYALGVPKWKTIFKIVLPTALSGIVTGVMLA 222

Query: 514 CGGAW-------NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
                            +   +W         L  ++ +  + G+   V+
Sbjct: 223 VARVMGESAPVLILVGATPAINWNVFEGNQNSLPLFMLQMYQAGTNQNVI 272


>gi|300781609|ref|ZP_07091463.1| ABC superfamily ATP binding cassette transporter permease
           [Corynebacterium genitalium ATCC 33030]
 gi|300533316|gb|EFK54377.1| ABC superfamily ATP binding cassette transporter permease
           [Corynebacterium genitalium ATCC 33030]
          Length = 200

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 19/207 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A    L  L A++ S L        A +S R   V+V +  ++  IP L         FM
Sbjct: 6   AGHHLLIALPAIIASFLIAVPLGWAAHRSGRFREVIVVVTSLIYVIPGLAMF-----VFM 60

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L  G  I + +  + A+    +  M  S   +   +P  + + + +   +   +   + 
Sbjct: 61  PLVLGTSILSPINVVVAMTLYGIALMVRSAADAFDAVPGAVRQSATAAGYTPLARVMRVE 120

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P + PGL+  +          VVA+  + +     ++ +  +G+      +      I+
Sbjct: 121 LPLAGPGLLSGVR---------VVAASTVSLISVGALVGVQSLGTLFTEGFQRAFPTEII 171

Query: 243 YAMLTMLGVIFLYD---QLLFRPMIVW 266
             ++  + +  L D    L+ R  + W
Sbjct: 172 AGLVGTILLAVLIDVCLTLIARLTMPW 198



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 8/192 (4%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
           +  L    +   +  II + +I +P+G            I     L+   P    F  + 
Sbjct: 2   IAGLAGHHLLIALPAIIASFLIAVPLGWAAHRSGRFREVIVVVTSLIYVIPGLAMFVFMP 61

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             +    L+P   +  + ++G    ++ +      A P   ++ A++   T       + 
Sbjct: 62  LVLGTSILSPINVVVAMTLYGIA-LMVRSAADAFDAVPGAVRQSATAAGYTPLARVMRVE 120

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           LP   P  ++G         +   V  +            LG    E  ++    E++ G
Sbjct: 121 LPLAGPGLLSGVRVVAASTVSLISVGALVGVQS-------LGTLFTEGFQRAFPTEIIAG 173

Query: 559 VLIMCCFVLALN 570
           ++      + ++
Sbjct: 174 LVGTILLAVLID 185


>gi|302547532|ref|ZP_07299874.1| putative ABC-type sugar transport system, permease component
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302465150|gb|EFL28243.1| putative ABC-type sugar transport system, permease component
           [Streptomyces himastatinicus ATCC 53653]
          Length = 315

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 3/200 (1%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+     +     I   FTY D ++  WL   T+  VVV    A+++ +  G  +    
Sbjct: 76  FGLWFSGDFALWDNISETFTYNDGVFTRWL-LNTVLYVVVGAGGATLLAVLGGYALAKFT 134

Query: 413 H-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 +        A P            S   L    W  ++    + + +    +  
Sbjct: 135 FPGKRAVFAVIIGAVAVPGTALAVPTFLMFSEMGLTNTPWAVIIPSLISPFGLYLMWVFA 194

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWG 530
             A P++  E A     +  R +  ++LP + P  VT  +      W N  +   +    
Sbjct: 195 TEAVPDELLEAARIDGASEVRTFFQVVLPLLAPGIVTVLLFTVVATWNNYFLPLIMLKDP 254

Query: 531 HIHLRTTGLGAYIAESTEKG 550
             +  T GL ++ A++   G
Sbjct: 255 DWYPLTLGLNSWNAQAATAG 274



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L ++     + L   +     AK        +  ++    ++P       T +
Sbjct: 103 RWLLNTVLYVVVGAGGATLLAVLGGYALAKFTFPGKRAVFAVIIGAVAVPGTALAVPTFL 162

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           A+        + +      +   +P +L E +R    S  + F+
Sbjct: 163 MFSEMGLTNTP----WAVIIPSLISPFGLYLMWVFATEAVPDELLEAARIDGASEVRTFF 218

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V  ++ ++   W 
Sbjct: 219 QVVLPLLAPGIVTVLLFTVVATWN 242


>gi|254463545|ref|ZP_05076961.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2083]
 gi|206680134|gb|EDZ44621.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium HTCC2083]
          Length = 293

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 87/204 (42%), Gaps = 4/204 (1%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD-IMQSIPILGFLTFTV 120
            + A  +TL     + ISL    +     ++S         I+  + +++P +  ++  +
Sbjct: 83  WRAAWNSTLVCFFVVTISLTLGTLGGYALSRSPHRYAFWFLIIALVFRALPQITLVSGYL 142

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F   +   + G    AI  +         + ++    NIP+DL+E +     + +Q F
Sbjct: 143 PVF---FEFNMWGYLPTAIVVLIAINQPFTLWMLHSFFKNIPQDLDESAMVDGCNRFQAF 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
            ++ VP   PG++   + S    +     + +++  D    +P IGS++     + +++ 
Sbjct: 200 RHVIVPVMWPGVITTGLFSFLLAYNDFAVTTLLLNQDNQTMIPKIGSFLGTTQTKGNVMF 259

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMI 264
            + A++++   +F+   +  R ++
Sbjct: 260 AVSAVVSVTAPLFVMILVFQRQIV 283



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 73/202 (36%), Gaps = 9/202 (4%)

Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQ-LLAAFP----ANVF 433
            W        V   ++  S+ +    G  +   PH  +        +  A P     + +
Sbjct: 82  FWRAAWNSTLVCFFVVTISLTLGTLGGYALSRSPHRYAFWFLIIALVFRALPQITLVSGY 141

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+      + +L       +++I   Q + L+ + +     P D  E A       ++ 
Sbjct: 142 LPVFFEFNMWGYLP---TAIVVLIAINQPFTLWMLHSFFKNIPQDLDESAMVDGCNRFQA 198

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
           +R++I+P ++P  +T  + +   A+N   V+ +            +G+++  +  KG+  
Sbjct: 199 FRHVIVPVMWPGVITTGLFSFLLAYNDFAVTTLLLNQDNQTMIPKIGSFLGTTQTKGNVM 258

Query: 554 EVVLGVLIMCCFVLALNRFLWH 575
             V  V+ +   +  +      
Sbjct: 259 FAVSAVVSVTAPLFVMILVFQR 280


>gi|154498789|ref|ZP_02037167.1| hypothetical protein BACCAP_02780 [Bacteroides capillosus ATCC
           29799]
 gi|150272179|gb|EDM99383.1| hypothetical protein BACCAP_02780 [Bacteroides capillosus ATCC
           29799]
          Length = 243

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAA---------KSRRLGMVLVPILDIMQS 109
            +       T      A  ++ +                     R L  VL  +++I++S
Sbjct: 19  WTFLGGTWETLYSTFIATAVAYILGLALGIALTVGEENGIHPLPRPLMKVLNVVINILRS 78

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P    L    +    L  G  IG   A+I  +  +    +   +  S   + R + E +
Sbjct: 79  MP-FLLLMILCLPLSGLLVGTEIGT-AASIPPLIIAAAPFVARLVETSFREVDRGVLEAA 136

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +S   S +Q  W + +P S P L+     + 
Sbjct: 137 QSMGCSTFQIIWKVILPESKPSLIAGFATAF 167



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 13/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRPH---ISSKIQPFAQLLAAFPANVFFPL 436
           T++   +   +A I+ + +GI +      G  P    +   +     +L + P  +   L
Sbjct: 28  TLYSTFIATAVAYILGLALGIALTVGEENGIHPLPRPLMKVLNVVINILRSMPFLLLMIL 87

Query: 437 VVS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            +     +    +     +  L+I    +     V            E A S   + ++ 
Sbjct: 88  CLPLSGLLVGTEIGTAASIPPLIIAAAPFVARL-VETSFREVDRGVLEAAQSMGCSTFQI 146

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
              +ILP   P  + G  TA         ++     G + +  T  G 
Sbjct: 147 IWKVILPESKPSLIAGFATAFITILGYGAMAGFIGGGGLGMIATTYGY 194


>gi|153953459|ref|YP_001394224.1| ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346340|gb|EDK32876.1| Predicted ABC transporter, permease component [Clostridium kluyveri
           DSM 555]
          Length = 222

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 83/217 (38%), Gaps = 17/217 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPILGFL 116
            S T   ++ A  I+LL       +   +R        RL  +L  I++ ++S+P +  L
Sbjct: 13  LSETIEMVIIAGSIALLIGMPLGIILVVTRKGHILENERLNKILATIVNAIRSLPSI-IL 71

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++    L  G  +G + AAI  I       +   +  S+  +     E + S     
Sbjct: 72  IVVLLPLARLIVGTTLGMK-AAIVPISIGISPLLARIIETSIEQVEWGKIEAALSMGAKP 130

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +Q    + +P ++P L+  + +S+     F   + +I  G       G+GS       ++
Sbjct: 131 FQIISKVLIPEALPSLIKGITISIISIIEFTAIAGVIGAG-------GLGSLAIRFGYQR 183

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
               I+   + +L  +  + Q     +    NK R +
Sbjct: 184 FREDIMIVTVILLIFLVQFIQFSGDRISKHVNKKRYK 220



 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 74/206 (35%), Gaps = 17/206 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAF 428
           ++V+     T+  V++   IA +I +P+GI +             ++  +      + + 
Sbjct: 7   IFVLKGLSETIEMVIIAGSIALLIGMPLGIILVVTRKGHILENERLNKILATIVNAIRSL 66

Query: 429 PANVFFPLVVSCV-SYYHLNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSF 486
           P+ +   +++            +  +++ I      +L  +I            E A S 
Sbjct: 67  PSIILIVVLLPLARLIVGTTLGMKAAIVPISIGISPLLARIIETSIEQVEWGKIEAALSM 126

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
               ++    +++P   P  + G   +       + ++ V   G       GLG+     
Sbjct: 127 GAKPFQIISKVLIPEALPSLIKGITISIISIIEFTAIAGVIGAG-------GLGSLAIRF 179

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
             +    ++++  +I+  F++   +F
Sbjct: 180 GYQRFREDIMIVTVILLIFLVQFIQF 205


>gi|91787052|ref|YP_548004.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
 gi|91696277|gb|ABE43106.1| binding-protein-dependent transport systems inner membrane
           component [Polaromonas sp. JS666]
          Length = 213

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 11/181 (6%)

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
            + +A++I IP GI +  R  ++  +   A +    P+     LV+  +           
Sbjct: 30  ALFLAALISIPAGIAVARRGGLALAVVNAANVGRTLPSLAVLALVMPLLGTGFA----PA 85

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              +       I+ + I G      D  + A    +T     R + LP   P    G  T
Sbjct: 86  LFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMGMTRTLLLRQVELPMALPVIFAGLRT 145

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                 + ++++     G       GLG +I       + P++++G + +    L  +  
Sbjct: 146 GAVQVISGAVLAAFIGGG-------GLGDFITAGIAMMAIPQLLVGAIPVTLLALGTDFL 198

Query: 573 L 573
            
Sbjct: 199 F 199



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 63/186 (33%), Gaps = 15/186 (8%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           SA+ ++ L +       A+   L + +V   ++ +++P L  L   +      +      
Sbjct: 29  SALFLAALISIPAGIAVARRGGLALAVVNAANVGRTLPSLAVLALVMPLLGTGF------ 82

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
               A+FA+    +  +       +  +  D  + +    ++       + +P ++P + 
Sbjct: 83  --APALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMGMTRTLLLRQVELPMALPVIF 140

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +           V +  I  G       G+G +I   I    +  +L   + +  +  
Sbjct: 141 AGLRTGAVQVISGAVLAAFIGGG-------GLGDFITAGIAMMAIPQLLVGAIPVTLLAL 193

Query: 254 LYDQLL 259
             D L 
Sbjct: 194 GTDFLF 199


>gi|116754017|ref|YP_843135.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanosaeta thermophila PT]
 gi|116665468|gb|ABK14495.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Methanosaeta thermophila PT]
          Length = 301

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 6/162 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L  + A+ I++      A   A+    R   VL P ++++  +P + +    +   V 
Sbjct: 76  TLLVAILALAINMSVGIPLAIYLAELSGPRTRAVLKPAVELLAGVPSIVYGFLGIIILVP 135

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           Y  N +      + LA    +    + ++T     +L  +P + +E S +   + WQ   
Sbjct: 136 YLGNTFDMLTGRSILAGAILLGVMFIPSITTICEDALRAVPNEFKEGSMALGATRWQTIR 195

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           Y+ +P +  G+   +++++       +A  ++V     IP P
Sbjct: 196 YVVLPAASSGITAAVLLNIGNIIGETMAVLLVVGNIARIPTP 237



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 88/234 (37%), Gaps = 12/234 (5%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TY 373
           L   L  +     E+ L + +   ++ M+ IF + +   +        +  ++     + 
Sbjct: 4   LPTALRSLTERIIESLLLITAVASIAIMILIFAYLIRESLPAIFEVGVLNLVLGEKWHSS 63

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPAN 431
            ++  +  L   T+   ++ + I   + IP+ I++     P   + ++P  +LLA  P+ 
Sbjct: 64  GNIFGMRPLIVNTLLVAILALAINMSVGIPLAIYLAELSGPRTRAVLKPAVELLAGVPSI 123

Query: 432 VFFPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVI--AGASAFPNDFKEVA 483
           V+  L +  +  Y       L     L+  ++ G  +      I      A PN+FKE +
Sbjct: 124 VYGFLGIIILVPYLGNTFDMLTGRSILAGAILLGVMFIPSITTICEDALRAVPNEFKEGS 183

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   T W+  RY++LP          +   G     ++   +       + T 
Sbjct: 184 MALGATRWQTIRYVVLPAASSGITAAVLLNIGNIIGETMAVLLVVGNIARIPTP 237


>gi|256840975|ref|ZP_05546482.1| phosphate ABC transporter, permease PstA [Parabacteroides sp. D13]
 gi|256736818|gb|EEU50145.1| phosphate ABC transporter, permease PstA [Parabacteroides sp. D13]
          Length = 295

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 74/196 (37%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S+++    F  L++++V+ +  IL   I +           +     +    +      T
Sbjct: 17  SQQVAFGFFSFLSYLVVVILFVILGFIILKGASVISWDFLTEAPQEGMTSGGIFPAIVGT 76

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++ + +IS     +        A + +L   +  + + +  +P + F  F +  F++
Sbjct: 77  LYLVIGSSLISFPIGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLFVS 136

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + +A  F +    +  +  +  ++L +I       S +   +  Q    + +
Sbjct: 137 TLGWGD--SIIAGSFTLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRVVL 194

Query: 186 PFSMPGLVWNMMMSMS 201
           P + P ++  +++S+ 
Sbjct: 195 PMAFPNIITGLILSIG 210



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASI 399
            L +    V+ G  I      I +       Q+      +      T++ V+   +I+  
Sbjct: 30  YLVVVILFVILGFIILKGASVISWDFLTEAPQEGMTSGGIFPAIVGTLYLVIGSSLISFP 89

Query: 400 IWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSL 454
           I I  GI++        +   I+     L+  P+ VF  F + +   +    +  +  S 
Sbjct: 90  IGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLFVSTLGWGDSIIAGSF 149

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +   +   I+        +  + F+  + +   T  +  R ++LP  FP  +TG I + 
Sbjct: 150 TLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRVVLPMAFPNIITGLILSI 209

Query: 515 G 515
           G
Sbjct: 210 G 210


>gi|255326059|ref|ZP_05367146.1| ABC D-methionine transporter, permease component [Rothia
           mucilaginosa ATCC 25296]
 gi|255296770|gb|EET76100.1| ABC D-methionine transporter, permease component [Rothia
           mucilaginosa ATCC 25296]
          Length = 231

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 83/226 (36%), Gaps = 17/226 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKS 93
           TT+P               L      T   +   MV + L   +   L          ++
Sbjct: 4   TTLPLAASKTDWSEFLPEKLLPAIGDTFYMVSITMVCAGLVGLIVGALLYTTREGNIFQN 63

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R +  +L  ++++++ IP    L   +    +   G  +G   AA+FA+     + +   
Sbjct: 64  RFVYTILNILVNVIRPIP-FIILIAALGPLTSAVVGTRLGVN-AAVFAMSFGAAFAIARI 121

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q++ +I   + E +R+   S     + + +P ++  L+           F V+    +
Sbjct: 122 VEQNMVSIDPGVIEAARAMGASKLTILFTVMIPEALGPLILGYT-------FLVIGVVDM 174

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +   G+G    +   ++    I +A++ ++ V+    Q +
Sbjct: 175 SAMAGYVGAGGLGKIAIVDGYQRFNDEITWAVVAIIIVLVQLVQFI 220



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 23/236 (9%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIW--------IGFRP 412
           ++    +   + + L    L  I  T + V + ++ A ++ + VG          I    
Sbjct: 5   TLPLAASKTDWSEFLPEKLLPAIGDTFYMVSITMVCAGLVGLIVGALLYTTREGNIFQNR 64

Query: 413 HISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            + + +     ++   P  +      PL  + V              M FG  + I   V
Sbjct: 65  FVYTILNILVNVIRPIPFIILIAALGPLTSAVVGTRLGVN--AAVFAMSFGAAFAIARIV 122

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                +      E A +   +       +++P      + G      G  + S ++    
Sbjct: 123 EQNMVSIDPGVIEAARAMGASKLTILFTVMIPEALGPLILGYTFLVIGVVDMSAMAGYVG 182

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G       GLG        +    E+   V+ +   ++ L +F+ + L     R 
Sbjct: 183 AG-------GLGKIAIVDGYQRFNDEITWAVVAIIIVLVQLVQFIGNFLAKKVMRR 231


>gi|220911403|ref|YP_002486712.1| binding-protein-dependent transporters inner membrane component
           [Arthrobacter chlorophenolicus A6]
 gi|219858281|gb|ACL38623.1| binding-protein-dependent transport systems inner membrane
           component [Arthrobacter chlorophenolicus A6]
          Length = 298

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 4/204 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           Q    + +  ++  V+SL+     A   A+ + R   +++  +      P +  +T    
Sbjct: 90  QALLNSIIIGVTVTVVSLVIGVFAAYALARLNFRFKYLVLGFILGASMFPGVALITPLFQ 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F N+     +G   A I    +  +    +++      +P +LEE +R    +  Q F 
Sbjct: 150 LFTNIG---WMGTYQALIIPNISFVLPLTVYTLTSFFREMPWELEESARVDGCTQGQAFR 206

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + P +    +++    W   + +  +    T      I S+      +    AI
Sbjct: 207 KVIMPLAAPAIFTTAILAFISSWNEFLIASQLSNERTQPVTVAIASFAGAQPNQIPYTAI 266

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIV 265
           + A   +   + +   +  R ++ 
Sbjct: 267 MAAGTIVTIPLVILVLVFQRKIVA 290



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 4/188 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++   V + +++ +I +     +          +  F    + FP      PL     + 
Sbjct: 95  SIIIGVTVTVVSLVIGVFAAYALARLNFRFKYLVLGFILGASMFPGVALITPLFQLFTNI 154

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     L +  I       ++ + +     P + +E A     T  + +R +I+P   
Sbjct: 155 GWMGTYQALIIPNISFVLPLTVYTLTSFFREMPWELEESARVDGCTQGQAFRKVIMPLAA 214

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG--VLI 561
           P   T AI A   +WN  +++   S       T  + ++      +  +  ++    ++ 
Sbjct: 215 PAIFTTAILAFISSWNEFLIASQLSNERTQPVTVAIASFAGAQPNQIPYTAIMAAGTIVT 274

Query: 562 MCCFVLAL 569
           +   +L L
Sbjct: 275 IPLVILVL 282


>gi|110835544|ref|YP_694403.1| phosphate ABC transporter permease [Alcanivorax borkumensis SK2]
 gi|110648655|emb|CAL18131.1| phosphate ABC transporter permease protein [Alcanivorax borkumensis
           SK2]
          Length = 422

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 53/150 (35%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           +   +      +   M+  +++S       A      A   R    +   ++ + ++P +
Sbjct: 196 EQAGILGAILGSLFTMIVTLLLSFPIGVAAAVYLEEFAPKNRFTDFIEVNINNLAAVPSI 255

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +   + L+ G      L     +    +  +  S   ++  +P  + + +    
Sbjct: 256 IFGLLGLAVIIGLF-GLPRSVPLVGGIVLTLMTLPTVIISSRAAIKAVPPSIRQAAMGLG 314

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q   +  +P ++PG++   ++ M+  
Sbjct: 315 ASKMQVVLHHVLPLALPGMLTGAIIGMAQA 344



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 65/161 (40%), Gaps = 6/161 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            +   ++     ++F ++V ++++  I +   +++     +   +  I+     LAA P+
Sbjct: 195 PEQAGILGAILGSLFTMIVTLLLSFPIGVAAAVYLEEFAPKNRFTDFIEVNINNLAAVPS 254

Query: 431 NVFFPL-VVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +F  L +   +  + L  ++ L   +++   T   ++ +  A   A P   ++ A    
Sbjct: 255 IIFGLLGLAVIIGLFGLPRSVPLVGGIVLTLMTLPTVIISSRAAIKAVPPSIRQAAMGLG 314

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +  +   + +LP   P  +TGAI     A   +    +  
Sbjct: 315 ASKMQVVLHHVLPLALPGMLTGAIIGMAQALGETAPLLMIG 355


>gi|326692917|ref|ZP_08229922.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease
           component [Leuconostoc argentinum KCTC 3773]
          Length = 343

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 13/193 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           + L  + A  I L+    Y   +  K   +   +  I++I+ SIP L  +T   + F + 
Sbjct: 143 SLLVAIVATFIDLVIGVAYGVFSGWKGGWVDNAMQRIIEILSSIPNLIIVTMLGLLFGSG 202

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
               ++   +     +   QV NMT S+ +      RD    ++S   S ++      +P
Sbjct: 203 IASIILAIAMTGWLGMAR-QVRNMTLSLKE------RDYVLAAKSLGESSFKIAVKHLIP 255

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL----AIL 242
                ++  +MM++     F      I +G        +GS IA A            I 
Sbjct: 256 NMAGTIIVQIMMTVPSAIMFEAVLSAINLGVKPPTAS-LGSLIADAQSMLQFYPYQVLIP 314

Query: 243 YAMLTMLGVIFLY 255
            A+L ++ + F+ 
Sbjct: 315 SAVLVLISLAFIL 327



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 7/191 (3%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           I++   +V   I  +I +  G++ G++   + + +Q   ++L++ P  +   ++      
Sbjct: 142 ISLLVAIVATFIDLVIGVAYGVFSGWKGGWVDNAMQRIIEILSSIPNLIIVTMLGLLFGS 201

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  L +++    G    +    +   S    D+   A S   + ++     ++P + 
Sbjct: 202 GIASIILAIAMTGWLGMARQVRNMTL---SLKERDYVLAAKSLGESSFKIAVKHLIPNMA 258

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF--PEVVLGVLI 561
              +   +     A     V    + G      + LG+ IA++     F   +V++   +
Sbjct: 259 GTIIVQIMMTVPSAIMFEAVLSAINLGVKPPTAS-LGSLIADAQSMLQFYPYQVLIPSAV 317

Query: 562 MCCFVLALNRF 572
           +    LA    
Sbjct: 318 LVLISLAFILL 328


>gi|311899550|dbj|BAJ31958.1| putative osmoprotectant ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 265

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 53/150 (35%), Gaps = 15/150 (10%)

Query: 90  AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
              S R   V+  +  + +++P LG +T  V+             + A +  +       
Sbjct: 52  IGYSGRGLFVVTALAGVARALPTLGLVTLAVLLVGVG--------DAAVLLPLTALAAPP 103

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M  +  + +     D+ + +R   L+  Q    + VP + P L+  +  +          
Sbjct: 104 MLVAAAEGVRGTVPDVRDAARGIGLTHPQTLLRVCVPAAAPTLLAGVRTAAVQVIATATV 163

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           +  + +G       G+G Y+   +  ++  
Sbjct: 164 AAYVGLG-------GLGRYVIDGLATRNFP 186



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 46/146 (31%), Gaps = 11/146 (7%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           IG+       +   A +  A P      L V  V        L L+ L        +L  
Sbjct: 52  IGYSGRGLFVVTALAGVARALPTLGLVTLAVLLVGVGDAAVLLPLTAL----AAPPMLVA 107

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G      D ++ A    +T  +    + +P   P  + G  TA       + V+   
Sbjct: 108 AAEGVRGTVPDVRDAARGIGLTHPQTLLRVCVPAAAPTLLAGVRTAAVQVIATATVAAYV 167

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFP 553
             G       GLG Y+ +     +FP
Sbjct: 168 GLG-------GLGRYVIDGLATRNFP 186


>gi|258592742|emb|CBE69051.1| putative glycine betaine/carnitine/choline ABC transporter
           (permease and substrate binding protein) [NC10 bacterium
           'Dutch sediment']
          Length = 514

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 5/134 (3%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             +    ++  L  L A   ++        +A +  RLG VL+   +I Q++P L    F
Sbjct: 12  ADMLSAIAQHLLLTLVATAAAIAIAVPLGIVATRRPRLGAVLLTFANIAQTVPSLAMFGF 71

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V   +    G       +A+  +    +  +  +    +  I R   +   +  ++  Q
Sbjct: 72  LVALPLIGGVGTR-----SALLVLILYALLPVMRNTVAGIQGIDRAARDAGVALGMTPQQ 126

Query: 179 KFWYLGVPFSMPGL 192
               + +P +MP +
Sbjct: 127 LLLQVELPLAMPTM 140



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +P+GI    RP + + +  FA +    P+   F  +V+      +     L +L+++   
Sbjct: 37  VPLGIVATRRPRLGAVLLTFANIAQTVPSLAMFGFLVALPLIGGVGTRSALLVLILYALL 96

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
             ++ N +AG        ++   +  +T  +    + LP   P  
Sbjct: 97  -PVMRNTVAGIQGIDRAARDAGVALGMTPQQLLLQVELPLAMPTM 140


>gi|313891405|ref|ZP_07825021.1| phosphate ABC transporter, permease protein PstA [Dialister
           microaerophilus UPII 345-E]
 gi|313120180|gb|EFR43356.1| phosphate ABC transporter, permease protein PstA [Dialister
           microaerophilus UPII 345-E]
          Length = 309

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 74/201 (36%), Gaps = 6/201 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++     I ++   L           +     ++     +      T   ++ ++ +S+ 
Sbjct: 34  IIKIFTGITVVVFALFLANVLYNGIKVFSPEILSFTEKGIGNQLFNTIYLLVLSLFVSVP 93

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    +    S ++  +L   ++ + S+P +    F    F+     +      A 
Sbjct: 94  IGIFSGIYMSEYVTSGKISSILKMAVETLSSLPSIVVGLFGYFAFVTYVGTQWNLLSGAL 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             +IFT  +  +T + Y +   +P + ++ S +   + ++    + +P +   ++  +++
Sbjct: 154 TVSIFTIPL--ITATTYDACKEVPDNYKQGSFALGATRFETIRKVILPAASTRIMTGVIL 211

Query: 199 SMSGGWFFVVASEMIVVGDTV 219
           + SG  F   A+ +   G + 
Sbjct: 212 A-SGRVFGEAAALLYTAGMST 231



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 8/186 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           ++   + +  F +     +    +     +  FT + +   ++    T++ +V+ + ++ 
Sbjct: 36  KIFTGITVVVFALFLANVLYNGIKVFSPEILSFTEKGIGNQLFN---TIYLLVLSLFVSV 92

Query: 399 IIWIPVGIWIG---FRPHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLS 453
            I I  GI++        ISS ++   + L++ P+ V   F               L  +
Sbjct: 93  PIGIFSGIYMSEYVTSGKISSILKMAVETLSSLPSIVVGLFGYFAFVTYVGTQWNLLSGA 152

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +   T   I           P+++K+ + +   T +   R +ILP      +TG I A
Sbjct: 153 LTVSIFTIPLITATTYDACKEVPDNYKQGSFALGATRFETIRKVILPAASTRIMTGVILA 212

Query: 514 CGGAWN 519
            G  + 
Sbjct: 213 SGRVFG 218


>gi|296454549|ref|YP_003661692.1| sugar ABC transporter permease [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183980|gb|ADH00862.1| ABC-type sugar transport system permease component [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 301

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 4/156 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +    ++V+S++  F         R  G   + +  +   +   G +   ++Y     
Sbjct: 100 SVVVTAISIVLSIIVAFFACAALTLYRFRGRKPIMVFVLAIQMTSGGIIPQFIIYNQLGL 159

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K  G  LA I  +    +WNM         NIP+D+ E +     + WQ  W +  P 
Sbjct: 160 LNKYSGLILAYIAMVLPFAIWNM----RGFFLNIPKDIFESAAVEGANDWQILWKITFPL 215

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           + PG+V   + +    W   + +   +   +   LP
Sbjct: 216 AAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLP 251



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 43/142 (30%)

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P  +       LN    L L  I     + ++N+       P D  E A+      W+ 
Sbjct: 148 IPQFIIYNQLGLLNKYSGLILAYIAMVLPFAIWNMRGFFLNIPKDIFESAAVEGANDWQI 207

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              I  P   P  V+ ++ A   AWN  +++                +  +  T    F 
Sbjct: 208 LWKITFPLAAPGIVSTSVFAFINAWNDYMIAYTFMKDQSKYTLPVWLSSFSTPTMGTDFG 267

Query: 554 EVVLGVLIMCCFVLALNRFLWH 575
             +   +I    V+     +  
Sbjct: 268 GQMAASVIFSLPVVVFFMLIQR 289


>gi|283457306|ref|YP_003361879.1| metal ion ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133294|dbj|BAI64059.1| ABC-type metal ion transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 231

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 83/226 (36%), Gaps = 17/226 (7%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKS 93
           TT+P               L      T   +   M+ + L   +   L          ++
Sbjct: 4   TTLPLAASKTDWSEFLPEKLLPAIGDTFYMVSITMLCAGLVGLIVGALLYTTREGNIFQN 63

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R +  +L  ++++++ IP    L   +    +   G  +G   AA+FA+     + +   
Sbjct: 64  RFVYTILNILVNVIRPIP-FIILIAALGPLTSAVVGTRLGVN-AAVFAMSFGAAFAIARI 121

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + Q++ +I   + E +R+   S     + + +P ++  L+           F V+    +
Sbjct: 122 VEQNMVSIDPGVIEAARAMGASKLTILFTVMIPEALGPLILGYT-------FLVIGVVDM 174

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +   G+G    +   ++    I +A++ ++ V+    Q +
Sbjct: 175 SAMAGYVGAGGLGKIAIVDGYQRFNDEITWAVVAIIIVLVQLVQFI 220



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 23/236 (9%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIW--------IGFRP 412
           ++    +   + + L    L  I  T + V + ++ A ++ + VG          I    
Sbjct: 5   TLPLAASKTDWSEFLPEKLLPAIGDTFYMVSITMLCAGLVGLIVGALLYTTREGNIFQNR 64

Query: 413 HISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
            + + +     ++   P  +      PL  + V              M FG  + I   V
Sbjct: 65  FVYTILNILVNVIRPIPFIILIAALGPLTSAVVGTRLGVN--AAVFAMSFGAAFAIARIV 122

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                +      E A +   +       +++P      + G      G  + S ++    
Sbjct: 123 EQNMVSIDPGVIEAARAMGASKLTILFTVMIPEALGPLILGYTFLVIGVVDMSAMAGYVG 182

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
            G       GLG        +    E+   V+ +   ++ L +F+ + L     R 
Sbjct: 183 AG-------GLGKIAIVDGYQRFNDEITWAVVAIIIVLVQLVQFIGNFLAKKVMRR 231


>gi|170768972|ref|ZP_02903425.1| putrescine ABC transporter, permease protein PotH [Escherichia
           albertii TW07627]
 gi|170122044|gb|EDS90975.1| putrescine ABC transporter, permease protein PotH [Escherichia
           albertii TW07627]
          Length = 317

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 87/237 (36%), Gaps = 20/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     + ++  ++ + + +T D   L  Y  ++      + +  LL  +  A   A S
Sbjct: 69  LMEWADGQLSITLNLGNFLQLTDDPLYLDAY-LQSLQVAAISTICCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++      P  ++   LA 
Sbjct: 128 KPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  + V  M   +Y +L  I   L E +        + F+ + VP +  G++   M+
Sbjct: 188 YIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V  E++   D+++    IG  +           +  A+  ++ ++ + 
Sbjct: 248 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300


>gi|111021248|ref|YP_704220.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
 gi|110820778|gb|ABG96062.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 4/198 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T+       I L+     A   A+   R   V++ I+      P +  LT     F ++
Sbjct: 92  STIIGAVTTAIGLVVGVGTAYALARLHFRGKHVVLGIILAASMFPGVAVLTPLFQLFTSM 151

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                 G   A I    +  +    +++      +P +LEE +R    S  Q F  + +P
Sbjct: 152 G---WFGTYQALIIPNISFVLPLTIYTLTAFFKELPWELEEAARIDGASRRQAFRMVLLP 208

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + PGL    +++    W   + S  +    T      I  +      E+   +++ A  
Sbjct: 209 LAAPGLFTTAILAFIASWNEYLISSQLSNDVTQPATVAIAQFAGSKPHEEPFTSVMAAGT 268

Query: 247 TMLGVIFLYDQLLFRPMI 264
            +   + +   LL R ++
Sbjct: 269 VVTIPLVIIVLLLQRRIV 286



 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 61/202 (30%), Gaps = 2/202 (0%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF-P 435
           +       +     V   I  ++ +     +          +       + FP      P
Sbjct: 84  HFARALVNSTIIGAVTTAIGLVVGVGTAYALARLHFRGKHVVLGIILAASMFPGVAVLTP 143

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L     S         L +  I       ++ + A     P + +E A     +  + +R
Sbjct: 144 LFQLFTSMGWFGTYQALIIPNISFVLPLTIYTLTAFFKELPWELEEAARIDGASRRQAFR 203

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P   T AI A   +WN  ++S   S       T  +  +      +  F  V
Sbjct: 204 MVLLPLAAPGLFTTAILAFIASWNEYLISSQLSNDVTQPATVAIAQFAGSKPHEEPFTSV 263

Query: 556 VLGVLIMCCFVLALNRFLWHPL 577
           +    ++   ++ +   L   +
Sbjct: 264 MAAGTVVTIPLVIIVLLLQRRI 285


>gi|75758892|ref|ZP_00739004.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74493658|gb|EAO56762.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 224

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 8/148 (5%)

Query: 43  TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102
           + P  I D+        SL  +   T L      ++  +   + AT       L  VL P
Sbjct: 52  SSPSSIWDLFLTKWIDGSLWVHIWTTLLETGVGFILGTVLGAIIATFLWWMPLLARVLDP 111

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            L ++ ++P +      +V F             ++I       +      +Y +   + 
Sbjct: 112 YLVVLNAMPKVALGPIIIVIFGPNI--------SSSIAMGVIISIIITILVIYSAFQEVD 163

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
            +  +V  +F  + WQ +  + +P S P
Sbjct: 164 SNYIKVMDTFGANKWQCYKQVVLPASFP 191



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 54/120 (45%), Gaps = 6/120 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+    V  I+ +++   +  ++ + P ++  + P+  +L A P     P+++       
Sbjct: 77  TLLETGVGFILGTVLGAIIATFLWWMPLLARVLDPYLVVLNAMPKVALGPIIIVIFG--- 133

Query: 446 LNPNLWLSLLM-IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
             PN+  S+ M +  +    +  + +      +++ +V  +F    W+ ++ ++LP  FP
Sbjct: 134 --PNISSSIAMGVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFP 191


>gi|126462578|ref|YP_001043692.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126104242|gb|ABN76920.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 283

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 23/252 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFR 389
           +++  +      +       + G+ + + W+ +  G  V          +      ++  
Sbjct: 19  VRISRSAFSETRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGTRIARSLPV 78

Query: 390 VVVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +    +   +     G  IG              P +   + P    +AA P     P++
Sbjct: 79  LWGDFVQTFVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPIL 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    +   +    + +++ F        N + G +A     +++  ++  +  +    +
Sbjct: 139 VMWFGFDWQSKAAVVVVMVFFPVL----VNTVEGLAATDRMQRDLMKTYSASYAQTLLKL 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P+   G   A   A   +IV+E            G+G  I+    +     V  
Sbjct: 195 RLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWA 249

Query: 558 GVLIMCCFVLAL 569
            + +      A 
Sbjct: 250 EIAVAALAGSAF 261



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 19/270 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             I R + P IF L   ++   ++  L         P  I   +  +L V  L     +T
Sbjct: 29  TRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGTRIARSLPV--LWGDFVQT 86

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  LS  +I        A    +S  L   L+P+ + + ++PI+G     V++F   +
Sbjct: 87  FVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPILVMWFGFDW 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F +          +  + L    R   ++ +++  S  Q    L +P 
Sbjct: 147 QSKAAVVVVMVFFPV--------LVNTVEGLAATDRMQRDLMKTYSASYAQTLLKLRLPA 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   + ++ +      + +E         P+ G+G  I+  +    L  +   +  
Sbjct: 199 AMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWAEIAV 253

Query: 248 MLGVIFLY---DQLLFRPMIVWSNKFRLER 274
                  +     L+ R +  W    R +R
Sbjct: 254 AALAGSAFYGVVALVERGLTFWHPSQRRQR 283


>gi|95929019|ref|ZP_01311764.1| Phosphate transport system permease protein 2 [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134920|gb|EAT16574.1| Phosphate transport system permease protein 2 [Desulfuromonas
           acetoxidans DSM 684]
          Length = 530

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 62/154 (40%), Gaps = 23/154 (14%)

Query: 72  MLSAMVISLLFTFVYATLAA--KSRRLG-----MVLVPILDIMQSIPILGFLTFTVVYFM 124
           +L   V+SL F+F    +AA   S   G      ++   ++ +  IP + +  F + +F+
Sbjct: 286 VLLIFVMSL-FSFPLGVIAAIYLSEYAGEGLMVRMVRIAVNNLAGIPSIVYGIFGLGFFI 344

Query: 125 NLYPGKV---------------IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                 +                G  L A   +    V  +  +  ++L  IP  + E S
Sbjct: 345 YGIGSGIDQLFFPERLPTPTFGTGGLLWASLTLALLTVPVVIVTTEEALGAIPGGIREGS 404

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + +Q    + +P + PG++  +++SM+  
Sbjct: 405 LALGSTRFQTLTRILLPMASPGIMTGLILSMARA 438



 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%)

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +     LW SL +   T   ++        A P   +E + +   T ++    I+LP   
Sbjct: 365 FGTGGLLWASLTLALLTVPVVIVTTEEALGAIPGGIREGSLALGSTRFQTLTRILLPMAS 424

Query: 504 PYYVTGAITACGGA 517
           P  +TG I +   A
Sbjct: 425 PGIMTGLILSMARA 438


>gi|260550654|ref|ZP_05824863.1| D-methionine transport system permease metI [Acinetobacter sp.
           RUH2624]
 gi|260406365|gb|EEW99848.1| D-methionine transport system permease metI [Acinetobacter sp.
           RUH2624]
          Length = 219

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 16/203 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T L + ++  I+ L     A +           S+++   L  +++I +S+P 
Sbjct: 9   LITGTVDTLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQSLGWVINITRSVPF 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++       G   G   AA+  +  + +         SL  + + L E +++ 
Sbjct: 69  LILM-VALIPLTRWIVGTSYGV-WAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             +  Q  W++ +P ++PG+V    +++      ++ S  I        L  I       
Sbjct: 127 GCNRKQIIWHVLLPEALPGIVAGFTVTI----VTMINSSAIAGAIGAGGLGDIAYR--YG 180

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
            +  D+  +L  +L ++ ++ L 
Sbjct: 181 YQRFDMQIMLAVILVLIILVMLV 203



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 16/194 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GFRP--HISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V     IA +I +P+ + +      G  P   I+  +     +  + P  +    L
Sbjct: 16  TLLMVGASAFIAFLIGLPIAVVLVSTSEHGIHPSQKINQSLGWVINITRSVPFLILMVAL 75

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +         +  +W +++ +          +             E A +      +   
Sbjct: 76  IPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G       ++     +
Sbjct: 136 HVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGY------QRFDMQIM 189

Query: 556 VLGVLIMCCFVLAL 569
           +  +L++   V+ +
Sbjct: 190 LAVILVLIILVMLV 203


>gi|203287674|ref|YP_002222689.1| phosphate ABC transporter, permease protein [Borrelia recurrentis
           A1]
 gi|201084894|gb|ACH94468.1| phosphate ABC transporter, permease protein [Borrelia recurrentis
           A1]
          Length = 302

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 10/163 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +  A+ I L F      L+ K++      L  I++++  IP + +  F   + 
Sbjct: 82  ALTTFFSVAIALPIGLGFAI---YLSEKTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFI 138

Query: 124 MNLYPGKVI-----GAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
            +L     I     G  L     + +  +     S+ Y SL  +P+  +  S +   + W
Sbjct: 139 SSLIKNTFIREDNLGYNLITSIIVLSIMILPTIISVSYTSLKTVPKSYKLASLALAATDW 198

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           Q  + + +P +  G++  +++++       +A  M+  G  + 
Sbjct: 199 QTIYKVMIPSASKGILAGVILAIGRAIGETIAVLMVGGGSPLF 241



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 20/174 (11%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH----ISSKIQPFAQLLAA 427
           +Y  + ++I     T F V + + I       +G  I             +Q   +LLA 
Sbjct: 71  SYGILSFIINSALTTFFSVAIALPIG------LGFAIYLSEKTKGIYQKTLQTIIELLAG 124

Query: 428 FPANVFFPLVVSCVSYY---------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPN 477
            P+ V+     + +S           +L  NL  S++++       + +V        P 
Sbjct: 125 IPSVVYGFFGSTFISSLIKNTFIREDNLGYNLITSIIVLSIMILPTIISVSYTSLKTVPK 184

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +K  + +   T W+    +++P      + G I A G A   +I   +   G 
Sbjct: 185 SYKLASLALAATDWQTIYKVMIPSASKGILAGVILAIGRAIGETIAVLMVGGGS 238


>gi|118444828|ref|YP_878689.1| ABC transporter permease [Clostridium novyi NT]
 gi|118135284|gb|ABK62328.1| ABC transporter permease protein [Clostridium novyi NT]
          Length = 212

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 71/175 (40%), Gaps = 17/175 (9%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T   +L +  ++++  F+ A +           +  +  VL  I+++++S P 
Sbjct: 5   LLPALLETLYMVLISTALAIVVGFIPAIIMIITYKDGLKPNEAVYKVLDVIVNVLRSFP- 63

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++       GK  G   AAI  +       +T  +  SL  + + + E ++SF
Sbjct: 64  FIILMIVLIPLTRFIVGKSTGTT-AAIVPLTIGCAPFVTRIIESSLKEVDKGVVEAAKSF 122

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
             S +Q  + + +  ++P +V  M ++       +++         VI   G+G+
Sbjct: 123 GASTFQIVFKVMLKEALPSIVSGMTLT-------LISMVGFSAMAGVIGAGGLGA 170



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 379 VIWLGCITMFRVVVLIIIASIIW-IPVGIWI-----GFRP--HISSKIQPFAQLLAAFPA 430
           ++     T++ V++   +A ++  IP  I I     G +P   +   +     +L +FP 
Sbjct: 5   LLPALLETLYMVLISTALAIVVGFIPAIIMIITYKDGLKPNEAVYKVLDVIVNVLRSFPF 64

Query: 431 NVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            +   +++                 + +  G   ++   + +          E A SF  
Sbjct: 65  IILMIVLIPLTRFIVGKSTGTTAAIVPLTIGCAPFVTRIIESSLKEVDKGVVEAAKSFGA 124

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + ++    ++L    P  V+G           S ++ V   G +       G Y
Sbjct: 125 STFQIVFKVMLKEALPSIVSGMTLTLISMVGFSAMAGVIGAGGLGAVAMNYGYY 178


>gi|116070530|ref|ZP_01467799.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           BL107]
 gi|116065935|gb|EAU71692.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           BL107]
          Length = 316

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 95/278 (34%), Gaps = 37/278 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++  I+ ++  G   + +      ++    +       A       L   ++SL  
Sbjct: 35  VVALVLFAILFVVFQGGLPSMLRYGWEFLITSDWNPVDDEYGAGAAIYGTLVTSILSLFI 94

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYFM-------- 124
                   A         +++   +  +++++ ++P +    +  F +  F+        
Sbjct: 95  AIPLGVGTAIFITENIIPQKIRNFIGLMVELLAAVPSVVLGLWAIFVMEPFIRPGLEMLY 154

Query: 125 ------NLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGW 177
                  L+    +G        I    +  +  +    SL  +P  L + +     + W
Sbjct: 155 TYFGWIPLFSSPPMGPGTLPAVLILVVMILPIITAITRDSLQQVPERLTQAAYGIGTTRW 214

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
                + +P ++ G+V  +M+++       +A  MI+            PG  I + +A 
Sbjct: 215 GAITNVTLPAAISGIVGGVMLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAMLAN 274

Query: 232 AIKEQD------LLAILYAMLTMLGVIFLYDQLLFRPM 263
              E D      L+   + ++ M   + +  QLL + +
Sbjct: 275 QFGEADGSQVSSLMYAAFVLMIMTLAVNILAQLLVKRL 312



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 86/283 (30%), Gaps = 41/283 (14%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI--WLGCITMFRVVVLIIIASII 400
           ++ +  F ++  V  G     + Y        D   V   +     ++  +V  I++  I
Sbjct: 35  VVALVLFAILFVVFQGGLPSMLRYGWEFLITSDWNPVDDEYGAGAAIYGTLVTSILSLFI 94

Query: 401 WIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--------------------- 432
            IP+G+              I + I    +LLAA P+ V                     
Sbjct: 95  AIPLGVGTAIFITENIIPQKIRNFIGLMVELLAAVPSVVLGLWAIFVMEPFIRPGLEMLY 154

Query: 433 ----FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
               + PL  S        P + + ++MI      I           P    + A     
Sbjct: 155 TYFGWIPLFSSPPMGPGTLPAVLILVVMILPIITAI---TRDSLQQVPERLTQAAYGIGT 211

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--A 544
           T W     + LP      V G + A G A   ++   +      +   + L  G  I   
Sbjct: 212 TRWGAITNVTLPAAISGIVGGVMLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAM 271

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            + + G      +  L+   FVL +     + L     + L L
Sbjct: 272 LANQFGEADGSQVSSLMYAAFVLMIMTLAVNILAQLLVKRLSL 314


>gi|25029021|ref|NP_739075.1| putative phosphate transport system permease protein pstA
           [Corynebacterium efficiens YS-314]
 gi|23494308|dbj|BAC19275.1| putative phosphate transport system permease protein pstA
           [Corynebacterium efficiens YS-314]
          Length = 310

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A  LV  ++  ++       +  D        + +      A+   +  +   VI+ +
Sbjct: 47  IAAIPLVW-VLWTVISRGLGPILTVDWWTTSQQGILLQLPGGGAAHAIIGTMVQAVITSV 105

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +       A          RLG +   ++DI+  +P +    F    ++ L+     G 
Sbjct: 106 VSIPIGIFTAIYLVEYANGNRLGRITTFMVDILTGVPSIVAALFIYSMWIVLFGFDRSGL 165

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            ++    I    V  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V 
Sbjct: 166 AVSLSLVILMVPV--IIRNTEEMLRVVPHDLREASYALGVPKWKTIAKIVLPTALSGIVT 223

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 224 GVMLAIA 230



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 30/258 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----------TMFRVVV 392
           +L      +     + + W  I   +      D       G +           +   +V
Sbjct: 39  VLIYGAMFIAAIPLVWVLWTVISRGLGPILTVDWWTTSQQGILLQLPGGGAAHAIIGTMV 98

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSY 443
             +I S++ IP+GI+             +         +L   P+     F   +  V +
Sbjct: 99  QAVITSVVSIPIGIFTAIYLVEYANGNRLGRITTFMVDILTGVPSIVAALFIYSMWIVLF 158

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L +SL ++      I+ N        P+D +E + +  +  W+    I+LP   
Sbjct: 159 GFDRSGLAVSLSLVILMVPVIIRNTEEMLRVVPHDLREASYALGVPKWKTIAKIVLPTAL 218

Query: 504 PYYVTGAITACGGAWNASIV-------SEVASWGHIHLRTTGLGAYIAESTEKGSFP--- 553
              VTG + A       S         ++  +W       + L   + +  + G+ P   
Sbjct: 219 SGIVTGVMLAIARIMGESAPVLVLVGSTQATNWDPTTGPQSSLPLMMLDMYKAGTAPATL 278

Query: 554 -EVVLGVLIMCCFVLALN 570
            ++    L +   +LALN
Sbjct: 279 DKLWGAALTLVLIILALN 296


>gi|73748093|ref|YP_307332.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|147668879|ref|YP_001213697.1| phosphate ABC transporter, inner membrane subunit PstA
           [Dehalococcoides sp. BAV1]
 gi|289432119|ref|YP_003461992.1| phosphate ABC transporter inner membrane protein [Dehalococcoides
           sp. GT]
 gi|73659809|emb|CAI82416.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|146269827|gb|ABQ16819.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Dehalococcoides sp. BAV1]
 gi|288945839|gb|ADC73536.1| phosphate ABC transporter, inner membrane subunit PstA
           [Dehalococcoides sp. GT]
          Length = 283

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 72/223 (32%), Gaps = 20/223 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS--IIWIPVGIWIGFR-------PHIS 415
           G+  +         +   G I+   V  L ++    +I +PVGI              ++
Sbjct: 42  GFSWDFLFTPPAGGLAGDGGISSTIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLT 101

Query: 416 SKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-VIAGAS 473
             I+   Q LA  P+ +F        V+  H   ++    L +      +L         
Sbjct: 102 RFIRYGVQTLAGVPSILFGLFGFALFVTVLHFRFSILSGALTLACLLLPVLITATEEALK 161

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  ++  A +   T W+   ++ILP   P   TG I   G A   +    V   G   
Sbjct: 162 TVPRSYRAGAMALGATKWQSITHVILPAALPGIATGVILCAGRALGETACLYVTMGGSAA 221

Query: 534 LRTTGLG---------AYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +  + L           Y+A  T           VLI+    L
Sbjct: 222 MPDSLLSGGRSLALHVFYLATETNAIDKAMATAAVLIVIIVGL 264



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 20/203 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTV 120
           T +  L  + ++LL        AA          RL   +   +  +  +P + F  F  
Sbjct: 65  TIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLTRFIRYGVQTLAGVPSILFGLFGF 124

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F+ +   +      A   A     V  +  +  ++L  +PR     + +   + WQ  
Sbjct: 125 ALFVTVLHFRFSILSGALTLACLLLPV--LITATEEALKTVPRSYRAGAMALGATKWQSI 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----------YIA 230
            ++ +P ++PG+   +++          A   + +G +      + S          Y+A
Sbjct: 183 THVILPAALPGIATGVILCAGRA-LGETACLYVTMGGSAAMPDSLLSGGRSLALHVFYLA 241

Query: 231 LAIKEQDLLAILYAMLTMLGVIF 253
                 D      A+L ++ V  
Sbjct: 242 TETNAIDKAMATAAVLIVIIVGL 264


>gi|77463156|ref|YP_352660.1| ABC phosphate transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides 2.4.1]
 gi|126462028|ref|YP_001043142.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides ATCC 17029]
 gi|77387574|gb|ABA78759.1| ABC phosphate transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides 2.4.1]
 gi|126103692|gb|ABN76370.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 449

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 6/159 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPIL 104
            D   +  +   L      +   M+  +V++L      +      A K+R   ++ V I 
Sbjct: 211 ADASEVRPEAAGLGVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIA 270

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           + + ++P + F    +  F+N+         +  +       +  +  +   SL  +P  
Sbjct: 271 N-LAAVPSIVFGILGLAIFINMMGLPQSAPIVGGLILTL-MTLPTIIIATRVSLAAVPPS 328

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
           + + +     S  Q  ++  +P ++PG++   ++ M+  
Sbjct: 329 IRDAALGVGASRMQAVFHHVLPLALPGILTGTIIGMARA 367



 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     ++II  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIANLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++        P        L++   T   I+       +A P   ++ A     +  + 
Sbjct: 284 GLAIFINMMGLPQSAPIVGGLILTLMTLPTIIIATRVSLAAVPPSIRDAALGVGASRMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 VFHHVLPLALPGILTGTIIGMARA 367


>gi|315186272|gb|EFU20033.1| binding-protein-dependent transport systems inner membrane
           component [Spirochaeta thermophila DSM 6578]
          Length = 239

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVY 122
             +  + +L +  ++  F      L  + R   ++  +  ++  +Q+IP +  +TF V  
Sbjct: 52  LLQHVVMVLVSSAVAAAFGLGVGILVTRPRFSYLLEGVQSVVAGIQTIPPVAVITFAVPA 111

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +          A+ A+F   +     +    +  +   ++E +R   +        
Sbjct: 112 LGFGF--------APAVAALFLYGMLPPLNNTIAGMRAVDPSVKEAARGMGMEPGGILRE 163

Query: 183 LGVPFSMPGLVWNMMMSM 200
           + +P + P ++  +  S+
Sbjct: 164 VELPLAWPVILAGLRTSV 181



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 6/127 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPH--ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           V+V   +A+   + VGI +       +   +Q     +   P        V  + +    
Sbjct: 59  VLVSSAVAAAFGLGVGILVTRPRFSYLLEGVQSVVAGIQTIPPVAVITFAVPALGFGFAP 118

Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
               L L  +       L N IAG  A     KE A    +      R + LP  +P  +
Sbjct: 119 AVAALFLYGML----PPLNNTIAGMRAVDPSVKEAARGMGMEPGGILREVELPLAWPVIL 174

Query: 508 TGAITAC 514
            G  T+ 
Sbjct: 175 AGLRTSV 181


>gi|228993014|ref|ZP_04152937.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
           12442]
 gi|228766662|gb|EEM15302.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
           12442]
          Length = 288

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 77/186 (41%), Gaps = 9/186 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVD--IVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            +  I I+ +LL+ I E  +    +D  +   + +       A+ +   +  ++V+ + F
Sbjct: 31  MLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPKQAGIAAALSGTIVFMSIVVPVSF 90

Query: 83  TFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F   T       A+      ++   +  +  +P + F    +  F+     ++  + + 
Sbjct: 91  IFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVVFGLLGLTIFVYGL--QLGESIVT 148

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A F +    +  +  S  +++  +P  L E S     + WQ  + + VP ++PG++   +
Sbjct: 149 AAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATKWQTMYQIVVPTALPGILTGCV 208

Query: 198 MSMSGG 203
           +++S  
Sbjct: 209 LALSRA 214



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 11/207 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            I+ +    F +    + +SYM  +F  C++  +   I  + I Y+   F          
Sbjct: 8   RIKENMATRFWKDQIYKSISYMTMLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPK 67

Query: 382 LGCI------TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANV 432
              I      T+  + +++ ++ I  +   +++     +   +  ++   Q LA  P+ V
Sbjct: 68  QAGIAAALSGTIVFMSIVVPVSFIFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVV 127

Query: 433 F--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           F    L +           +  +  M       ++ +        P+   E +     T 
Sbjct: 128 FGLLGLTIFVYGLQLGESIVTAAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATK 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGA 517
           W+    I++P   P  +TG + A   A
Sbjct: 188 WQTMYQIVVPTALPGILTGCVLALSRA 214


>gi|70733746|ref|YP_257386.1| D-methionine ABC transporter permease [Pseudomonas fluorescens
           Pf-5]
 gi|68348045|gb|AAY95651.1| D-methionine ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 214

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L Q    T L +  + +I+LL     A +   S          L   L   +++ +SIP 
Sbjct: 6   LLQGILDTLLMVGVSSLIALLAGIPLAVILVTSGKGGIYEAPNLNRALGAFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  L  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRLIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P ++PG+V    +++
Sbjct: 124 GCRRWHIVWHVLLPEALPGIVGGFTITL 151



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 17/209 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T+  V V  +IA +  IP+ + +           P+++  +  F  L  + P  +    L
Sbjct: 13  TLLMVGVSSLIALLAGIPLAVILVTSGKGGIYEAPNLNRALGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIVW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G    +S       ++
Sbjct: 133 HVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDS-------QI 185

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           +L V+++   ++A  +     L     + 
Sbjct: 186 MLTVIVLLVILVAAIQLGGDRLARVLNKR 214


>gi|332558604|ref|ZP_08412926.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
 gi|332276316|gb|EGJ21631.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides WS8N]
          Length = 283

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 23/252 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFR 389
           +++  +      +       + G+ + + W+ +  G  V          +      ++  
Sbjct: 19  VRISRSAFSETRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIAGSLPV 78

Query: 390 VVVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +    +   +     G  IG              P +   + P    +AA P     P++
Sbjct: 79  LWGDFVQTFVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPIL 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    +   +    + +++ F        N + G +A     +++  ++  +  +    +
Sbjct: 139 VMWFGFDWQSKAAVVVVMVFFPVL----VNTVEGLAATDRMQRDLMKTYSASYAQTLLKL 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P+   G   A   A   +IV+E            G+G  I+    +     V  
Sbjct: 195 RLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWA 249

Query: 558 GVLIMCCFVLAL 569
            + +      A 
Sbjct: 250 EIAVAALAGSAF 261



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 19/270 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             I R + P IF L   ++   ++  L         P  I   +  +L V  L     +T
Sbjct: 29  TRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIAGSLPV--LWGDFVQT 86

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  LS  +I        A    +S  L   L+P+ + + ++PI+G     V++F   +
Sbjct: 87  FVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPILVMWFGFDW 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F +          +  + L    R   ++ +++  S  Q    L +P 
Sbjct: 147 QSKAAVVVVMVFFPV--------LVNTVEGLAATDRMQRDLMKTYSASYAQTLLKLRLPA 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   + ++ +      + +E         P+ G+G  I+  +    L  +   +  
Sbjct: 199 AMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWAEIAV 253

Query: 248 MLGVIFLY---DQLLFRPMIVWSNKFRLER 274
                  +     L+ R +  W    R +R
Sbjct: 254 AALAGSAFYGVVALVERGLTFWHPSQRRQR 283


>gi|298375744|ref|ZP_06985700.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           3_1_19]
 gi|298266781|gb|EFI08438.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           3_1_19]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 73/198 (36%), Gaps = 8/198 (4%)

Query: 10  FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYAS 66
             S+++    F  L++++V+ +  IL   I +                 +    +     
Sbjct: 15  RTSQQVAFGFFSFLSYLVVVILFVILGFIILKGASVISWDFLTQAPQEGMTSGGIFPAIV 74

Query: 67  RTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
            T   ++ + +IS     +        A + +L   +  + + +  +P + F  F +  F
Sbjct: 75  GTLYLVIGSSLISFPIGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLF 134

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           ++        + +A  F +    +  +  +  ++L +I       S +   +  Q    +
Sbjct: 135 VSTLGWGD--SIIAGSFTLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRV 192

Query: 184 GVPFSMPGLVWNMMMSMS 201
            +P + P ++  +++S+ 
Sbjct: 193 VLPMAFPNIITGLILSIG 210



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASI 399
            L +    V+ G  I      I +       Q+      +      T++ V+   +I+  
Sbjct: 30  YLVVVILFVILGFIILKGASVISWDFLTQAPQEGMTSGGIFPAIVGTLYLVIGSSLISFP 89

Query: 400 IWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSL 454
           I I  GI++        +   I+     L+  P+ VF  F + +   +    +  +  S 
Sbjct: 90  IGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLFVSTLGWGDSIIAGSF 149

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +   +   I+        +  + F+  + +   T  +  R ++LP  FP  +TG I + 
Sbjct: 150 TLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRVVLPMAFPNIITGLILSI 209

Query: 515 G 515
           G
Sbjct: 210 G 210


>gi|156976365|ref|YP_001447271.1| ABC-type phosphate transport system permease component [Vibrio
           harveyi ATCC BAA-1116]
 gi|156527959|gb|ABU73044.1| hypothetical protein VIBHAR_05138 [Vibrio harveyi ATCC BAA-1116]
          Length = 322

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      
Sbjct: 44  KERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVAT 102

Query: 72  MLSAMVISLLFTFVYA----------TLAAKSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S     +                  +RL  ++ P ++++  IP + +    L 
Sbjct: 103 MIVASIVSTAGAVLVGVPVGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLV 162

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 163 IIVPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKI 222

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 223 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 261



 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 8/131 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+ +       N  L   +++       
Sbjct: 135 KRLADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPT 194

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 195 VITVSETSIRAVPRTYKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMA 254

Query: 524 SEVASWGHIHL 534
             +       +
Sbjct: 255 IIMVMGNAPAM 265


>gi|24379567|ref|NP_721522.1| putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|290580432|ref|YP_003484824.1| putative phosphate ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377512|gb|AAN58828.1|AE014950_11 putative phosphate ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|254997331|dbj|BAH87932.1| putative phosphate ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 15/204 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL F+LV G+ N+  H +   +   +    + I L           +   ++  ++IS+ 
Sbjct: 28  LLLFILVRGLPNVSWHFLTGRSSSYEAGGGIGIQL---------YNSFFLLVVTLIISIP 78

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +          AK  RL   +   ++I+ S+P +    F  + F+  +         A 
Sbjct: 79  LSMGAGIYLSEYAKKGRLTDFVRTCIEILSSLPSVVVGLFGYLIFVVQFQYGFSIISGAL 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +F   +  MT ++  SL N+     E   +  +S W+   ++ +P ++PG+V  +++
Sbjct: 139 ALTVFN--LPQMTRNIEDSLRNVHHTQREAGLALGISRWETVLHVVIPEALPGIVTGIVL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G +   L
Sbjct: 197 A-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 16/191 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
              ++ I    ++  +  G+   S  ++     +Y+    +      + F +VV +II+ 
Sbjct: 18  AGIIVAILASLLLFILVRGLPNVSWHFLTGRSSSYEAGGGIGIQLYNSFFLLVVTLIISI 77

Query: 399 IIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            + +  GI++        ++  ++   ++L++ P+     +VV    Y            
Sbjct: 78  PLSMGAGIYLSEYAKKGRLTDFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFQYGFS 132

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASS-------FHITGWRWWRYIILPGIFPYYVT 508
           +I G     +FN+        +  + V  +         I+ W    ++++P   P  VT
Sbjct: 133 IISGALALTVFNLPQMTRNIEDSLRNVHHTQREAGLALGISRWETVLHVVIPEALPGIVT 192

Query: 509 GAITACGGAWN 519
           G + A G  + 
Sbjct: 193 GIVLASGRIFG 203


>gi|57239255|ref|YP_180391.1| phosphate ABC transporter permease [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579218|ref|YP_197430.1| phosphate ABC transporter permease [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161334|emb|CAH58257.1| putative ABC transporter, membrane-spanning protein [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417844|emb|CAI27048.1| Phosphate transport system permease protein pstA [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 420

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119
           + +  + +++I L F              L  K+R   ++ V I + + ++P + F    
Sbjct: 200 SLIGSIFSIIICLTFAVPIGITSGICLNELIPKNRISYIIEVSITN-LAAVPSIIFGILG 258

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +  ++N++      + +  +  +    + N+  +  Q+L  +P  +++ + S   S  Q 
Sbjct: 259 LAIYINIFKIPRSSSFIGGL-TLSLMMLPNLVIATKQALTAVPSSVKDAAFSLGASNMQV 317

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
             +   P ++PG++  +++S++
Sbjct: 318 IMHHSFPLALPGIMQGVILSIA 339



 Score = 38.8 bits (89), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVV 438
           ++   +  III     +P+GI  G        +  IS  I+     LAA P+ +F  L +
Sbjct: 200 SLIGSIFSIIICLTFAVPIGITSGICLNELIPKNRISYIIEVSITNLAAVPSIIFGILGL 259

Query: 439 SC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +     + +    L +       ++       +A P+  K+ A S   +  +   
Sbjct: 260 AIYINIFKIPRSSSFIGGLTLSLMMLPNLVIATKQALTAVPSSVKDAAFSLGASNMQVIM 319

Query: 496 YIILPGIFPYYVTGAITAC 514
           +   P   P  + G I + 
Sbjct: 320 HHSFPLALPGIMQGVILSI 338


>gi|94972281|ref|YP_594321.1| binding-protein-dependent transport systems inner membrane
           component [Deinococcus geothermalis DSM 11300]
 gi|94554332|gb|ABF44247.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Deinococcus geothermalis DSM 11300]
          Length = 255

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 7/210 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           ++ ++  Q+   + +  ++A  + +L     A   A+ ++ G+ L   + + + IP   +
Sbjct: 44  IERNNFLQFTKNSMIVAVTATALGMLLGLPAAYAIARFKQRGLSL--WILVSRIIP---Y 98

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +TF +  F+      +IG+  A I +     +  + +       +IP DLEE +     S
Sbjct: 99  ITFLLPLFLVFTRLNLIGSYTALIISHLIITLPLIVWITIAFFEDIPTDLEEAALVDGSS 158

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
               F  + +P   PG+V   +++M   W   + S  +++G        +  +  L+   
Sbjct: 159 RVGAFVRIILPLVAPGIVTAGILAMIFSWNQFLFS--LILGGPNTKTVPVAVFNFLSYGS 216

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
           QD  AI  A + +   I L    + + ++ 
Sbjct: 217 QDYGAIAAAAVLITLPIILLSLTVQKYIVK 246



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 3/184 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +M   V    +  ++ +P    I         +      +  +      PL +       
Sbjct: 56  SMIVAVTATALGMLLGLPAAYAIARFKQRGLSLWILVSRIIPY-ITFLLPLFLVFTRLNL 114

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     L +  +  T   I++  IA     P D +E A     +    +  IILP + P 
Sbjct: 115 IGSYTALIISHLIITLPLIVWITIAFFEDIPTDLEEAALVDGSSRVGAFVRIILPLVAPG 174

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            VT  I A   +WN  + S +    +       +  +++  ++   +  +    +++   
Sbjct: 175 IVTAGILAMIFSWNQFLFSLILGGPNTKTVPVAVFNFLSYGSQ--DYGAIAAAAVLITLP 232

Query: 566 VLAL 569
           ++ L
Sbjct: 233 IILL 236


>gi|298247631|ref|ZP_06971436.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297550290|gb|EFH84156.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 290

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + ++L++ +   +    +         +         +L Q    + L  L A  I+++ 
Sbjct: 33  VGYMLLLSVTPDIEVNGEHLLPSHWAFENYVQMWSTINLAQGLFNSVLISLVASTIAVVL 92

Query: 83  TFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNL---YPGKVIGAELA 137
               A +  +    G +  L  ++  +Q+IP +  L    V F++L      K++G    
Sbjct: 93  AVGAAYVITRFHFRGRIAYLYSLIG-LQAIPSIMLLLPLFVLFISLQSFLQVKLVGTYTG 151

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I    T  +   T+ +   L NIP D+EE +     +  Q  W + VP ++PGLV  ++
Sbjct: 152 VIITYLTFSLPFATWLLVTYLANIPLDVEEAAMIDGATRLQTLWRIIVPLALPGLVVALV 211

Query: 198 MSMSGGWFFVVASEMIV 214
            S   GW  V+ + ++ 
Sbjct: 212 FSFLTGWNDVLFASVLT 228


>gi|167620010|ref|ZP_02388641.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
          Length = 278

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 99  VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158
           V   ++ I Q+ P +  L   V                  + A+    +  +  S    L
Sbjct: 114 VARSVVHIGQTFPPVAVLALAVPAVGFGV--------KPVLIALILYGLLPIFESTIAGL 165

Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218
            ++P D  + +R   +S  Q+  ++ +P + P ++  + ++       VV +       +
Sbjct: 166 QDVPADAVDAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTATIGS 218

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
            +   G+G  I   ++  +   +L   L +  +  L    L
Sbjct: 219 TVAAKGLGDVIIAGLQTSNTAFVLQGGLVVALLAVLIYDAL 259



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
              +   FP      L V  V +      + L L  +      I  + IAG    P D  
Sbjct: 118 VVHIGQTFPPVAVLALAVPAVGFGVKPVLIALILYGLL----PIFESTIAGLQDVPADAV 173

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           + A    ++  +   ++ LP  FP  + G   A        +++   +     +   GLG
Sbjct: 174 DAARGMGMSALQRLAWVELPLAFPVILNGIRLA-------VVINLGTATIGSTVAAKGLG 226

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
             I    +  +   V+ G L++    + +
Sbjct: 227 DVIIAGLQTSNTAFVLQGGLVVALLAVLI 255


>gi|302535805|ref|ZP_07288147.1| phosphate ABC transporter, permease PstA [Streptomyces sp. C]
 gi|302444700|gb|EFL16516.1| phosphate ABC transporter, permease PstA [Streptomyces sp. C]
          Length = 360

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 95/287 (33%), Gaps = 14/287 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  S   F  ++     +       +     + + +C    V  +L + W  +  G   
Sbjct: 58  WGLISALLFVAVTYVASSVVENRRQAKDRVATSLVWVCFVLAVIPLLSLIWTTISRGAKA 117

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--HIS 415
                    +    +++    V      T+ +V +  +IA+ I +   +++       ++
Sbjct: 118 LDGAFLSHSMNGVTSFEQGGGVYHALLGTIEQVALATLIAAPIGLLTAVYLVEYGKGRLA 177

Query: 416 SKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             +  F  ++   P+ V   F L    ++          S+ +       ++ +      
Sbjct: 178 KAVTFFVDVMTGIPSIVAGLFILTTWNLALGFGPSGFAGSMALSILMMPVVVRSTEEMLK 237

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC-------GGAWNASIVSEV 526
             PN+ +E A +  +  WR    ++LP       TG + A                 +++
Sbjct: 238 LVPNELREAALALGVPKWRVILKVVLPTAIGGIATGVMLAIARIAGETAPIMLLVFGTQL 297

Query: 527 ASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALN 570
            +        + L  YI E  + G   S+       L++  FV+ LN
Sbjct: 298 INGNPFEGAQSSLPLYIWEQYKVGSEASYDRAWAAALVLIAFVMILN 344



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 89/268 (33%), Gaps = 28/268 (10%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY-----ASRTTLRMLSAM 76
           L+    V+ +I +L       +     +D   ++  ++ +  +          L  +  +
Sbjct: 91  LVWVCFVLAVIPLLSLIWTTISRGAKALDGAFLSHSMNGVTSFEQGGGVYHALLGTIEQV 150

Query: 77  VISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPIL--GFLTFTVVYFMNLYP 128
            ++ L       L A         RL   +   +D+M  IP +  G    T       + 
Sbjct: 151 ALATLIAAPIGLLTAVYLVEYGKGRLAKAVTFFVDVMTGIPSIVAGLFILTTWNLALGFG 210

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                  +A    +    V     S  + L  +P +L E + +  +  W+    + +P +
Sbjct: 211 PSGFAGSMALSILMMPVVV----RSTEEMLKLVPNELREAALALGVPKWRVILKVVLPTA 266

Query: 189 MPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KEQDL 238
           + G+   +M++++            V  +++I           +  YI        E   
Sbjct: 267 IGGIATGVMLAIARIAGETAPIMLLVFGTQLINGNPFEGAQSSLPLYIWEQYKVGSEASY 326

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266
                A L ++  + + + L+ R +  W
Sbjct: 327 DRAWAAALVLIAFVMILN-LVARGIARW 353


>gi|53804609|ref|YP_113548.1| phosphate ABC transporter permease PstA [Methylococcus capsulatus
           str. Bath]
 gi|53758370|gb|AAU92661.1| phosphate ABC transporter, permease protein PstA [Methylococcus
           capsulatus str. Bath]
          Length = 434

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPIL 113
           +   +      +   +L  +V+SL      A    +       +  I   ++ + ++P +
Sbjct: 208 EQAGIGGALMGSFYTVLVTLVLSLPIGVAAAIYLEEFAPRNHWVDFIEVNINNLAAVPSI 267

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N + G    + L     +    +  +  +   +L  +P  + E +    
Sbjct: 268 VFGLLGLAVFIN-FLGVPRSSPLVGGLVLTLMTLPVIIIAARSALKAVPPSIREAAMGVG 326

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q  ++  VP +MPG++   ++ MS  
Sbjct: 327 ASPMQTVFHHVVPLAMPGMLTGAIIGMSRA 356



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           + + V+V ++++  I +   I++     R H    I+     LAA P+ VF  L ++   
Sbjct: 219 SFYTVLVTLVLSLPIGVAAAIYLEEFAPRNHWVDFIEVNINNLAAVPSIVFGLLGLAVFI 278

Query: 443 YYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +   P    L   L++   T   I+    +   A P   +E A     +  +   + ++
Sbjct: 279 NFLGVPRSSPLVGGLVLTLMTLPVIIIAARSALKAVPPSIREAAMGVGASPMQTVFHHVV 338

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-TGLG----------AYIAESTE 548
           P   P  +TGAI     A   S    +       +    G+              A+S E
Sbjct: 339 PLAMPGMLTGAIIGMSRALGESAPLLMIGMVAFIVDIPHGIFDPATVLPVQVYLWADSPE 398

Query: 549 KGSFPEVVLGVLIMCCFVLALN 570
           +G        +L++  F++ +N
Sbjct: 399 RGFVERTSAAILVLLAFLILMN 420


>gi|259417131|ref|ZP_05741050.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259346037|gb|EEW57851.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 541

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 47/215 (21%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF----- 118
            RT +  L+  V  ++  +  A + A   SR   ++++           L  L F     
Sbjct: 322 LRTMIMSLAITVSCIVLGYPVAWILANLPSRTANVLMI-----------LVLLPFWTSLL 370

Query: 119 ------------------TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQS 157
                              +V+   +       +I  +   I A+    +  M   MY  
Sbjct: 371 VRTSAWKVMLQQQGVINDVLVWLGIVADNDRLVMINNQFGTIVAMTHILLPFMILPMYSV 430

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  I       ++S   + W  FW +  P S+PG+    ++       + +  E++    
Sbjct: 431 MQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTK 490

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                   G +I+  I      ++ + +   LG I
Sbjct: 491 --------GVFISNRIAFHISQSLNWGLAAALGTI 517



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 37/120 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  +V        +N      + M      +++  + +        +   A S   T 
Sbjct: 390 LVWLGIVADNDRLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSLGATN 449

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I++S   G
Sbjct: 450 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNWG 509


>gi|288931343|ref|YP_003435403.1| phosphate ABC transporter inner membrane subunit PstA [Ferroglobus
           placidus DSM 10642]
 gi|288893591|gb|ADC65128.1| phosphate ABC transporter, inner membrane subunit PstA [Ferroglobus
           placidus DSM 10642]
          Length = 282

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 80/205 (39%), Gaps = 10/205 (4%)

Query: 28  VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL--LFTFV 85
           V G++ +    +         +D+  +T      P+ A      + S  +I+L  +F   
Sbjct: 17  VFGLLVLSALIVYTFYEALGWLDLQFLTSPPSRFPEKAGIYPALVSSVYMITLVGIFVLP 76

Query: 86  YATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
               AA       K  +L  ++   +  + ++P + +    +  F+  +  K  G  L  
Sbjct: 77  LGVGAALYLEEYAKKGKLTRIIDVNISNLAAVPSIVYGLLGIGLFVATFKLK-PGTVLVG 135

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    V  +  +  ++L  +P+ + E S +   + WQ    + +P + PG++  +++
Sbjct: 136 ALTLTLLVVPIVIVTAQEALRAVPKSVREASFALGATKWQTIKEVVLPQAFPGILTGVIL 195

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLP 223
           ++S          MI +  TV   P
Sbjct: 196 ALSRAIGETAPLIMIGMATTVFVAP 220



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 70/204 (34%), Gaps = 12/204 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIP 403
           +F   V+  + +   ++++G++   F             I   +   V +I +  I  +P
Sbjct: 17  VFGLLVLSALIVYTFYEALGWLDLQFLTSPPSRFPEKAGIYPALVSSVYMITLVGIFVLP 76

Query: 404 VGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSL 454
           +G+              ++  I      LAA P+ V+    + +   ++      + +  
Sbjct: 77  LGVGAALYLEEYAKKGKLTRIIDVNISNLAAVPSIVYGLLGIGLFVATFKLKPGTVLVGA 136

Query: 455 LMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +      I+         A P   +E + +   T W+  + ++LP  FP  +TG I A
Sbjct: 137 LTLTLLVVPIVIVTAQEALRAVPKSVREASFALGATKWQTIKEVVLPQAFPGILTGVILA 196

Query: 514 CGGAWNASIVSEVASWGHIHLRTT 537
              A   +    +           
Sbjct: 197 LSRAIGETAPLIMIGMATTVFVAP 220


>gi|253317019|ref|ZP_04840232.1| phosphate ABC transporter, inner membrane subunit PstC
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
          Length = 225

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 18/217 (8%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMN 125
            VI+ +F       AA       S R   ++ PIL+I+  IP + F    LTF      +
Sbjct: 9   TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 68

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G      ++    +    V  +T     ++ ++P  + E +     +  +    + +
Sbjct: 69  FISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 128

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-------GIGSYIALAIKEQDL 238
           P +  G+V ++++++S      +   +         L          G  + +A  +   
Sbjct: 129 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 188

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            + +Y  +  +G       L+   +  W S +FR E 
Sbjct: 189 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY 225



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 21/214 (9%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVS 439
            +IA+I  +PVG+                 I+P  ++LA  P  VF         P++ S
Sbjct: 9   TVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRS 68

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +S       +   L++       I        ++ PN  +E A     T       ++L
Sbjct: 69  FISGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVL 128

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG-------LGAYIAESTEKGSF 552
           P      V   + A   A   +++  +A+        +         G  +  +T   +F
Sbjct: 129 PAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATF 188

Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
              +   +    F L +   + + L  + ++  R
Sbjct: 189 GSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFR 222


>gi|222147399|ref|YP_002548356.1| ABC transporter [Agrobacterium vitis S4]
 gi|221734389|gb|ACM35352.1| ABC transporter [Agrobacterium vitis S4]
          Length = 225

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 10/204 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
           +     VI L    +      +++A +I +PVG+++G        I   A  L + P+  
Sbjct: 11  WTGDGGVIALVIQHLAYSGAALLLACLIGLPVGLYVGHTGRGVVFIAGLANALRSLPSLG 70

Query: 433 FFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
              L+V        +   ++    ++++      I+    AG +A      + A      
Sbjct: 71  LIVLLVILFGPVFSSDMAFIVPSLIVLVLLAVPPIMTGSYAGIAAVDPAAVDAARGMGKC 130

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
                  + LP   P   +G  +A     + + ++   S G       GLG  I +   +
Sbjct: 131 PLDILFDVELPCALPLIFSGLRSATLQIISTATIAAYVSLG-------GLGRLIIDGRAQ 183

Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573
             + ++  G +++    L ++  +
Sbjct: 184 HDYYQMAAGAVLVGALALTVDLLI 207



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 66/186 (35%), Gaps = 8/186 (4%)

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           +A++++ L           + R  + +  + + ++S+P LG +   V+ F  ++   +  
Sbjct: 30  AALLLACLIGLPVGLYVGHTGRGVVFIAGLANALRSLPSLGLIVLLVILFGPVFSSDMAF 89

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              + I  +  + V  +    Y  +  +     + +R          + + +P ++P + 
Sbjct: 90  IVPSLIVLVLLA-VPPIMTGSYAGIAAVDPAAVDAARGMGKCPLDILFDVELPCALPLIF 148

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             +  +          +  + +G       G+G  I     + D   +    + +  +  
Sbjct: 149 SGLRSATLQIISTATIAAYVSLG-------GLGRLIIDGRAQHDYYQMAAGAVLVGALAL 201

Query: 254 LYDQLL 259
             D L+
Sbjct: 202 TVDLLI 207


>gi|318061587|ref|ZP_07980308.1| putative ABC transporter permease protein [Streptomyces sp.
           SA3_actG]
 gi|318077171|ref|ZP_07984503.1| putative ABC transporter permease protein [Streptomyces sp.
           SA3_actF]
          Length = 265

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A +I +PV +W+G      +     + +  A P      L+       H      
Sbjct: 36  LSMLVACLIALPVALWLGHLGKGGALAVNISNIGRAIPTLALLALLSLTPLREHGETPTL 95

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           ++L++       +L N   G         E A    ++G + +  + LP  FP  +TG  
Sbjct: 96  IALVLF--AIPPVLTNAYIGMREADRAVVEAARGMGMSGGQVFLRVELPLAFPLLMTGIR 153

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +A       + ++ +   G       GLG  I       +  +
Sbjct: 154 SAAVQTVATATLAAIPGGG-------GLGRVITAGFNLQNTSQ 189



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 10/141 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L ++   T L ML A +I+L        L     + G + V I +I ++I        
Sbjct: 25  HRLIEHLGFTGLSMLVACLIALPVALWLGHLG----KGGALAVNISNIGRAI------PT 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  +          E   + A+    +  +  + Y  +    R + E +R   +SG Q
Sbjct: 75  LALLALLSLTPLREHGETPTLIALVLFAIPPVLTNAYIGMREADRAVVEAARGMGMSGGQ 134

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
            F  + +P + P L+  +  +
Sbjct: 135 VFLRVELPLAFPLLMTGIRSA 155


>gi|269793643|ref|YP_003313098.1| carbohydrate ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
 gi|269095828|gb|ACZ20264.1| carbohydrate ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
          Length = 297

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 5/193 (2%)

Query: 73  LSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           LS   ++L+     A   ++   R    L  I+  +Q++P +  L     +F  +   K+
Sbjct: 99  LSVTALTLIVAIFAAYGFSRYEFRGKRALSMIIVTVQAVPPITLLIP---FFGLMVTLKL 155

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  I       +      +      +P++L+E  +          W + VP ++PG
Sbjct: 156 YNTYQGLILTYMVFTLPYAIIMLTGYFNTLPKELDEAVKVDGAGALTALWRILVPIAIPG 215

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           +V   + +    W   + +  +   D +  +P IG  + +     +   ++   +     
Sbjct: 216 IVSVGIYTFMIAWNEYLFALTLTRTDDMRTVP-IGIQLLMGQHSYEWNEMMAMSILGCIP 274

Query: 252 IFLYDQLLFRPMI 264
           + +      R  I
Sbjct: 275 VLILFLFFQRYFI 287



 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 54/187 (28%), Gaps = 3/187 (1%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHIS-SKIQPFAQLLAAFPAN-VFFPLVVSCVSYYHLNP 448
           + +  +  I+ I                +      + A P   +  P     V+    N 
Sbjct: 99  LSVTALTLIVAIFAAYGFSRYEFRGKRALSMIIVTVQAVPPITLLIPFFGLMVTLKLYNT 158

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
              L L  +  T  Y +  +    +  P +  E               I++P   P  V+
Sbjct: 159 YQGLILTYMVFTLPYAIIMLTGYFNTLPKELDEAVKVDGAGALTALWRILVPIAIPGIVS 218

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
             I     AWN  + +   +          +G  +        + E++   ++ C  VL 
Sbjct: 219 VGIYTFMIAWNEYLFALTLTRTDDMRTVP-IGIQLLMGQHSYEWNEMMAMSILGCIPVLI 277

Query: 569 LNRFLWH 575
           L  F   
Sbjct: 278 LFLFFQR 284


>gi|150399174|ref|YP_001322941.1| phosphate ABC transporter inner membrane subunit PstC
           [Methanococcus vannielii SB]
 gi|150011877|gb|ABR54329.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methanococcus vannielii SB]
          Length = 290

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 17/204 (8%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
               +++L F        A        +++  +L P ++I+ +IP + +    +V F+ L
Sbjct: 71  FLVTILALAFAIPLGVGCAIFLAELAPKKIQKILRPSIEILTAIPSVVYGFVGMVLFVPL 130

Query: 127 ----YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +      +  +A   +    +  +T     ++ ++P  L+E S +   + WQ    
Sbjct: 131 IRDIFNTNPGYSWFSASIILGIMILPTITVISEDAINSVPYHLKEGSLALGATRWQTVKK 190

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKE- 235
           + +P S+ G++  +++ M       +A  M+     +I      P+  + S+I L IKE 
Sbjct: 191 VILPASLSGIISGIILGMGRAIGETMAVLMVAGNWALIPTSIFDPVRPLTSHIVLNIKET 250

Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259
                I YAM     V+FL   +L
Sbjct: 251 ASGSPIYYAMFATGLVLFLMVLIL 274



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 79/223 (35%), Gaps = 16/223 (7%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           E+ ++L +    + +  +  F +V  + +      I +I       +     +     + 
Sbjct: 11  ESVIKLSALLSSAVIFSMVLFLIVSSLPVFNTVSPIDFIFG--LDWNPFRGFYGIFPMIV 68

Query: 389 RVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------F 434
              ++ I+A    IP+G+             I   ++P  ++L A P+ V+         
Sbjct: 69  GSFLVTILALAFAIPLGVGCAIFLAELAPKKIQKILRPSIEILTAIPSVVYGFVGMVLFV 128

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL+    +          S+++       I        ++ P   KE + +   T W+  
Sbjct: 129 PLIRDIFNTNPGYSWFSASIILGIMILPTITVISEDAINSVPYHLKEGSLALGATRWQTV 188

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           + +ILP      ++G I   G A   ++   + +     + T+
Sbjct: 189 KKVILPASLSGIISGIILGMGRAIGETMAVLMVAGNWALIPTS 231


>gi|114765351|ref|ZP_01444468.1| phosphate ABC transporter, permease protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114542331|gb|EAU45360.1| phosphate ABC transporter, permease protein [Roseovarius sp.
           HTCC2601]
          Length = 452

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILD 105
            D      +   L      +   ML  + ++L      +      A   +    +   + 
Sbjct: 213 ADASESRPEQAGLGVSMLGSFFMMLVVLFLALPIGVAASIYLEEFAPQNKFTDFIEVNIS 272

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            + ++P + F    +  F+  +      A L     +    +  +  S   SL  +P  +
Sbjct: 273 NLAAVPSIVFGILGLAAFIQ-FAHLPQSAPLVGGLTLTLMTLPTIVISTRASLKAVPPSI 331

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +     S  Q  ++  +P +MPG++   ++ ++  
Sbjct: 332 RDAALGVGASKMQSVFHHVLPLAMPGILTGTIIGLAQA 369



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 26/215 (12%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            ++M     ++++   + +P+G+               +  I+     LAA P+ VF  L
Sbjct: 226 GVSMLGSFFMMLVVLFLALPIGVAASIYLEEFAPQNKFTDFIEVNISNLAAVPSIVFGIL 285

Query: 437 VVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P     +    +   T   I+ +  A   A P   ++ A     +  + 
Sbjct: 286 GLAAFIQFAHLPQSAPLVGGLTLTLMTLPTIVISTRASLKAVPPSIRDAALGVGASKMQS 345

Query: 494 WRYIILPGIFPYYVTGAITACGGAWN------ASIVSEVASWGHIHLRTTGLG------- 540
             + +LP   P  +TG I     A           +    +  +     +G         
Sbjct: 346 VFHHVLPLAMPGILTGTIIGLAQALGETAPLLLIGMVGYIATNYPEGVISGFMSPNSAMP 405

Query: 541 AYIAESTEKGS---FPEVVLGVLIMCCFVLALNRF 572
           A I E  ++     +     G++I+  F+L +N  
Sbjct: 406 AQIYEWAKRADPAYYERAWGGIIILLVFLLVMNVI 440


>gi|327334187|gb|EGE75901.1| maltose ABC transporter, permease protein [Propionibacterium acnes
           HL097PA1]
          Length = 301

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 8/190 (4%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTFTVV 121
           L  L     + + T     LAA S        RR G++ + ++ +   +  +  +   + 
Sbjct: 89  LNTLIIAAATAVLTVFLGALAAYSFSRMRFKGRRGGLLALMLVQMFPQLLTVVAIFLLLT 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  ++YP   IG+ LA I       +   T+ MY     +P+ L+E +R       + F+
Sbjct: 149 WIGDVYPVLGIGSRLALIMVYLGGALGANTYLMYGFFNTVPQSLDEAARVDGAGHARIFF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P + P L    ++S  G +   V + +I+  D       IG Y  ++ +      +
Sbjct: 209 TLILPLAAPILAVVGLLSFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGV 268

Query: 242 LYAMLTMLGV 251
             A   +  +
Sbjct: 269 FAAGAVLAAL 278


>gi|309775535|ref|ZP_07670535.1| phosphate ABC transporter, permease protein PstA
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916629|gb|EFP62369.1| phosphate ABC transporter, permease protein PstA
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 273

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148
           AK  RL  ++   ++++  +P  I G +   V++ +    G      L   F +    + 
Sbjct: 83  AKPNRLTSLIRSAIEMLTGVPSIIFGLMGVAVLFPITQMFGATTTNILLGSFTMSIILLP 142

Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +  S  ++L  +P+ L + S S   +  Q  + + +P ++PG++  +++S+ 
Sbjct: 143 TIIRSTEEALIVVPQSLRDASLSVGANQSQTIFKIVLPCAVPGILTGVLLSIG 195



 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 413 HISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
            ++S I+   ++L   P+ +F        FP+             L  S  M       I
Sbjct: 87  RLTSLIRSAIEMLTGVPSIIFGLMGVAVLFPITQMF--GATTTNILLGSFTMSIILLPTI 144

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG------GAW 518
           + +        P   ++ + S      +    I+LP   P  +TG + + G       A 
Sbjct: 145 IRSTEEALIVVPQSLRDASLSVGANQSQTIFKIVLPCAVPGILTGVLLSIGRVIGESAAL 204

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAE--STEKGSFPEVVLGVLIMCCFVLALN 570
             ++ + V     +  + T L  +I    S+E+ +F       +++  FVL LN
Sbjct: 205 IYTMGTYVNDTPTLMSQGTSLAVHIYNIMSSEQPNFELASAISIVILVFVLILN 258


>gi|262275367|ref|ZP_06053177.1| maltose/maltodextrin ABC transporter permease protein MalG
           [Grimontia hollisae CIP 101886]
 gi|262220612|gb|EEY71927.1| maltose/maltodextrin ABC transporter permease protein MalG
           [Grimontia hollisae CIP 101886]
          Length = 292

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  T L + S +VISL    +     A+S  R  + ++ I  +++++P +  ++  ++ F
Sbjct: 85  AINTFLMVFSVVVISLAIGTLGGYALARSGFRYSLWILMIALVLRAMPHITLVSGYMLPF 144

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                   +G  +  + AI       M  S +    NIP+D++E +     + +Q F ++
Sbjct: 145 FEWNLWGHLGTTVIVLVAINQPFTLWMLHSFFL---NIPKDMDESAMVDGCTRFQAFRHV 201

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
            +P   PG++   + S    +     + M++  +    +P I S++     E +
Sbjct: 202 IIPVMWPGVITTGLFSFLLAYNDFAVTGMLLSQENQTMVPKIASFLGTTQVEGN 255



 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 68/175 (38%), Gaps = 3/175 (1%)

Query: 380 IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK-IQPFAQLLAAFPANVFF-PL 436
            WL  I T   V  +++I+  I    G  +       S  I   A +L A P        
Sbjct: 81  FWLAAINTFLMVFSVVVISLAIGTLGGYALARSGFRYSLWILMIALVLRAMPHITLVSGY 140

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++    +          ++++   Q + L+ + +     P D  E A     T ++ +R+
Sbjct: 141 MLPFFEWNLWGHLGTTVIVLVAINQPFTLWMLHSFFLNIPKDMDESAMVDGCTRFQAFRH 200

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551
           +I+P ++P  +T  + +   A+N   V+ +            + +++  +  +G+
Sbjct: 201 VIIPVMWPGVITTGLFSFLLAYNDFAVTGMLLSQENQTMVPKIASFLGTTQVEGN 255


>gi|238061327|ref|ZP_04606036.1| phosphate ABC transporter permease [Micromonospora sp. ATCC 39149]
 gi|237883138|gb|EEP71966.1| phosphate ABC transporter permease [Micromonospora sp. ATCC 39149]
          Length = 362

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 76  MVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--- 126
           + I+ L T     L A         R    +   +D+M  IP +    F + +++ +   
Sbjct: 147 VGIAALITVPLGILCAIYVVEYGRGRFAFAIRFFVDVMTGIPSIVSGLFVLAFWVLVVSP 206

Query: 127 --YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
               G+   +  AA  A+    +  +  S  + L  +P  L E + +  +  W+    + 
Sbjct: 207 VFNDGRPGFSGFAAALALSVLMLPTVVRSTEEMLRLVPAPLREGAYALGVPKWKTILRVV 266

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG+V  +M++++  
Sbjct: 267 LPTALPGIVTGVMLAIARA 285



 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 77/257 (29%), Gaps = 17/257 (6%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           IG             +  L      +            +    +++L +     V    +
Sbjct: 49  IGGPVLVVAVAALLYLAGLFAAANAVEGRRSARNRTWSALIHSAFVLAVLPLASVVWTLV 108

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL--IIIASIIWIPVGIWIGF----- 410
               + +       +  ++      G      V  L  + IA++I +P+GI         
Sbjct: 109 SKGVERLDGNFFGTSMNNIGARDANGGAYHAIVGTLEQVGIAALITVPLGILCAIYVVEY 168

Query: 411 -RPHISSKIQPFAQLLAAFPANV--------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
            R   +  I+ F  ++   P+ V        +  +V    +      + + + L +    
Sbjct: 169 GRGRFAFAIRFFVDVMTGIPSIVSGLFVLAFWVLVVSPVFNDGRPGFSGFAAALALSVLM 228

Query: 462 WYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
              +  +        P   +E A +  +  W+    ++LP   P  VTG + A   A   
Sbjct: 229 LPTVVRSTEEMLRLVPAPLREGAYALGVPKWKTILRVVLPTALPGIVTGVMLAIARAAGE 288

Query: 521 SIVSEVASWGHIHLRTT 537
           +    + + G   +   
Sbjct: 289 TAPVLLVAGGGAAINLN 305


>gi|289580176|ref|YP_003478642.1| phosphate ABC transporter inner membrane subunit PstC [Natrialba
           magadii ATCC 43099]
 gi|289529729|gb|ADD04080.1| phosphate ABC transporter, inner membrane subunit PstC [Natrialba
           magadii ATCC 43099]
          Length = 307

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 18/214 (8%)

Query: 79  SLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYP 128
           S L      TL A       S R+  V+ P L+I+  IP + +    L+F       +YP
Sbjct: 93  SALIAIPIGTLTAIYLSEYASSRVRRVVKPTLEILAGIPTIVYGFFALSFITPILQQIYP 152

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G       A    +    +  ++     ++ ++P  L   +     + ++    + +P S
Sbjct: 153 GTGTFNAAAGAIVVGVMIIPMVSSISEDAMSSVPDSLRNAAYGLGATKFEVSTQVVLPAS 212

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIALAIKEQDLLAI 241
           + G++   ++++S      +A  +       + +             + +   +  + +I
Sbjct: 213 LSGILAAYVLAISRAIGETMAVTLAAGALAQVTMNPFAEIQTMTAYMVEIGTGDASVGSI 272

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
            Y  L  +G+       L   + +W  +++R E 
Sbjct: 273 GYQSLFAIGLTLFAMTFLMNVLSMWIRSRYREEY 306



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 71/233 (30%), Gaps = 15/233 (6%)

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372
           + +    +G I           C+   V+  L I    V              +      
Sbjct: 8   LSRNGNDVGTIGDRLARYIFFGCAAVTVATTLAIVLVLVNGATDFFSTVSLTEFFTGTDW 67

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIAS-IIWIPVGIWIGF------RPHISSKIQPFAQLL 425
                     G + +    ++I + S +I IP+G              +   ++P  ++L
Sbjct: 68  SPRAADNPSFGVLPLVWGTMMITVGSALIAIPIGTLTAIYLSEYASSRVRRVVKPTLEIL 127

Query: 426 AAFPANVFFPLVVSCVSY-------YHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPN 477
           A  P  V+    +S ++             N     +++      ++ ++     S+ P+
Sbjct: 128 AGIPTIVYGFFALSFITPILQQIYPGTGTFNAAAGAIVVGVMIIPMVSSISEDAMSSVPD 187

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
             +  A     T +     ++LP      +   + A   A   ++   +A+  
Sbjct: 188 SLRNAAYGLGATKFEVSTQVVLPASLSGILAAYVLAISRAIGETMAVTLAAGA 240


>gi|25989589|gb|AAN05437.1| putative sugar permease [Thermus thermophilus]
          Length = 280

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 91/245 (37%), Gaps = 14/245 (5%)

Query: 38  GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-- 95
           G  + +     V  +P  L   +   Y   + L      V +L          A+ R   
Sbjct: 36  GHGKASSQDAPVGQLPGHLARPAFFHYLKNSFLVCSLTTVFALAVATFAGYALARFRFPG 95

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG---------KVIGAELAAIFAIFTSQ 146
             +    +L + Q IP + FL    + ++ +            +++G+    +F      
Sbjct: 96  AELFGGSVL-VTQVIPGILFLIPIYIMYIYVQNWVRSALGLEVRLVGSYGGLVFTYTAFF 154

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           V    + +     +IP++LEE +     + +Q F  + +P ++PGL    +      W  
Sbjct: 155 VPLSIWILRGFFASIPKELEEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDE 214

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL--LAILYAMLTMLGVIFLYDQLLFRPMI 264
           ++ ++++    T     GI +++       DL   A   A L +L + F   + L + + 
Sbjct: 215 LLFAQVLTTEATATVPVGIRNFVGNYQNRYDLVMAAATVATLPVLVLFFFVQRQLIQGLT 274

Query: 265 VWSNK 269
             + K
Sbjct: 275 AGAVK 279



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%)

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532
           ++ P + +E A     T ++ +  +ILP   P     A+     AW+  + ++V +    
Sbjct: 167 ASIPKELEEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDELLFAQVLTTEAT 226

Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
                G+  ++     +         V  +   VL  
Sbjct: 227 ATVPVGIRNFVGNYQNRYDLVMAAATVATLPVLVLFF 263


>gi|291166839|gb|EFE28885.1| oligopeptide ABC transporter permease OppC [Filifactor alocis ATCC
           35896]
          Length = 312

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 75/194 (38%), Gaps = 9/194 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           + +  + A +I+      Y  +A     R   +++ I+D++ +IP+  ++   +V+    
Sbjct: 111 SLIVGIVASIINFTIGVAYGGVAGYLGGRADNIMMRIVDVLSTIPLTLYVILLMVWMPEN 170

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              + I   +  ++ I  +++        Q      ++     R    SG +  +   +P
Sbjct: 171 RGMQNILVAIGTVYWIGMARIVR-----GQIFSLKEQEYVMAERVLGASGSRILFKHLIP 225

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ--DLLAILYA 244
            ++  ++ N+ MS+    F       I +G +      +GS     + +       + + 
Sbjct: 226 NALGPIIVNLTMSIPSAIFTEAFLSFIGLGISAPRAS-LGSLCNDVLDKFAIHPHLLFFP 284

Query: 245 MLTMLGVIFLYDQL 258
            L +  +I  ++ L
Sbjct: 285 ALALCLIILSFNFL 298



 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 28/267 (10%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVI 380
           + + + +L  N+     +    F  +    +   +      Q +       + Q +    
Sbjct: 35  WQDVWRRLKENKLAVISMFFLMFLAIMVFVLPYVYPYTYDVQDLSNTNQSPSMQHIFGTD 94

Query: 381 WLGCITMFRVVVLIIIASIIWI-------PVGIWIG-----FRPHISSKIQPFAQLLAAF 428
             G     RV+    ++ I+ I        +G+  G           + +     +L+  
Sbjct: 95  AHGRDLFIRVIYGTKVSLIVGIVASIINFTIGVAYGGVAGYLGGRADNIMMRIVDVLSTI 154

Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF---PNDFKEVASS 485
           P  ++  L++  +       N    +L+  GT ++I    I     F     ++      
Sbjct: 155 PLTLYVILLMVWMPENRGMQN----ILVAIGTVYWIGMARIVRGQIFSLKEQEYVMAERV 210

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
              +G R     ++P      +     +   A            G    R + LG+   +
Sbjct: 211 LGASGSRILFKHLIPNALGPIIVNLTMSIPSAIFTEAFLSFIGLGISAPRAS-LGSLCND 269

Query: 546 STEKGSF--PEVVLGVLIMCCFVLALN 570
             +K +     +    L +C  +L+ N
Sbjct: 270 VLDKFAIHPHLLFFPALALCLIILSFN 296


>gi|220932989|ref|YP_002509897.1| phosphate ABC transporter, inner membrane subunit PstC
           [Halothermothrix orenii H 168]
 gi|219994299|gb|ACL70902.1| phosphate ABC transporter, inner membrane subunit PstC
           [Halothermothrix orenii H 168]
          Length = 291

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 6/150 (4%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGF 115
            +      T +  L +MVIS+      A   ++  S R   +L P+++I+  IP  ++GF
Sbjct: 64  GILGQILSTLMVTLGSMVISVPLGVATAAYISEVASPRARSILKPVIEILAGIPSVVIGF 123

Query: 116 LTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           L   ++     + +        L     +    +  +      ++ ++P   +  S    
Sbjct: 124 LGIVLLGPVIASTFGLSNGLNALNGAILLAIMSLPTIISLSEDAISSVPDKFKRASLGLG 183

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + WQ    + +P S+ G++  +M+ M   
Sbjct: 184 ANDWQTLTRVTIPSSLSGVIAAIMLGMGRA 213



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 17/175 (9%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFA 422
           N  +Y +  Y I    ++   V +    + +I +P+G+           P   S ++P  
Sbjct: 54  NPTSYNEPGYGILGQILSTLMVTLG---SMVISVPLGVATAAYISEVASPRARSILKPVI 110

Query: 423 QLLAAFPANV--------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           ++LA  P+ V          P++ S     +    L  ++L+   +   I+       S+
Sbjct: 111 EILAGIPSVVIGFLGIVLLGPVIASTFGLSNGLNALNGAILLAIMSLPTIISLSEDAISS 170

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            P+ FK  +       W+    + +P      +   +   G A   ++   +A+ 
Sbjct: 171 VPDKFKRASLGLGANDWQTLTRVTIPSSLSGVIAAIMLGMGRAIGETMTVLMATG 225


>gi|83953657|ref|ZP_00962378.1| phosphate ABC transporter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841602|gb|EAP80771.1| phosphate ABC transporter, permease protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 446

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 52/142 (36%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  + ++L      +      A    L  ++   +  + ++P + F    + 
Sbjct: 223 MLGSLFMMLVVLALALPIGVAASIYLEEFAPKNLLTDIIEVNISNLAAVPSIVFGILGLA 282

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+N        A L     +    +  +  S   SL ++P  + + +     S  Q  +
Sbjct: 283 VFINYM-HLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQSVF 341

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   ++ ++  
Sbjct: 342 HHVLPLAAPGILTGTIIGLAQA 363



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 78/214 (36%), Gaps = 26/214 (12%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFP 435
             ++M   + ++++   + +P+G+              ++  I+     LAA P+ VF  
Sbjct: 219 MGVSMLGSLFMMLVVLALALPIGVAASIYLEEFAPKNLLTDIIEVNISNLAAVPSIVFGI 278

Query: 436 LVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
           L ++    Y   PN   L   L++   T   I+ +  A   + P   ++ A     +  +
Sbjct: 279 LGLAVFINYMHLPNSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQ 338

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWN------ASIVSEVASWGHIHLRTTGLG------ 540
              + +LP   P  +TG I     A           +    +        +GL       
Sbjct: 339 SVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNPPDGIASGLMDPNSAM 398

Query: 541 -AYIAESTEKGS---FPEVVLGVLIMCCFVLALN 570
            A I E  ++     +     G++I+  F++ +N
Sbjct: 399 PAQIYEWAKRADPAFYERAWGGIIILLVFLITMN 432


>gi|228999064|ref|ZP_04158646.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
 gi|228760681|gb|EEM09645.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
          Length = 288

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 77/186 (41%), Gaps = 9/186 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVD--IVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            +  I I+ +LL+ I E  +    +D  +   + +       A+ +   +  ++V+ + F
Sbjct: 31  MLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPKQAGIAAALSGTIVFMSIVVPVSF 90

Query: 83  TFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F   T       A+      ++   +  +  +P + F    +  F+     ++  + + 
Sbjct: 91  IFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVVFGLLGLTIFVYGL--QLGESIVT 148

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A F +    +  +  S  +++  +P  L E S     + WQ  + + VP ++PG++   +
Sbjct: 149 AAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATKWQTMYQIVVPTALPGILTGCV 208

Query: 198 MSMSGG 203
           +++S  
Sbjct: 209 LALSRA 214



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 11/207 (5%)

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
            I+ +    F +    + +SYM  +F  C++  +   I  + I Y+   F          
Sbjct: 8   RIKENMATRFWKDQIYKSISYMTMLFSICILILLLYQIFEKGISYLSIDFFMNFASRNPK 67

Query: 382 LGCI------TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANV 432
              I      T+  + +++ ++ I  +   +++     +   +  ++   Q LA  P+ V
Sbjct: 68  QAGIAAALSGTIVFMSIVVPVSFIFGVGTALYLEHYARQSVFTRIVELNIQTLAGVPSVV 127

Query: 433 F--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           F    L +           +  +  M       ++ +        P+   E +     T 
Sbjct: 128 FGLLGLTIFVYGLQLGESIVTAAFTMSLLVLPTVVVSSQEAIRMVPSSLLEASYGVGATK 187

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGA 517
           W+    I++P   P  +TG + A   A
Sbjct: 188 WQTMYQIVVPTALPGILTGCVLALSRA 214


>gi|255657218|ref|ZP_05402627.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-23m63]
 gi|296451941|ref|ZP_06893657.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879665|ref|ZP_06903641.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296259255|gb|EFH06134.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429334|gb|EFH15205.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 274

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 76/189 (40%), Gaps = 9/189 (4%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              +F +++ V+++G I I   G         +      + D   LP     T   +L +
Sbjct: 15  LSALFTIVSLVVIVGFIFIKGIGKMNFNF---LFSNYSASGDGGILP-MIITTLYTVLVS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +V++     + A      AK  +    +    + +  IP + +  F  ++F+        
Sbjct: 71  IVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFFVVTLKMGYS 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +   AI    V  +  +  ++L  +P+   E S +   + +Q  + + +P ++PG+
Sbjct: 131 IVAGSLTVAIIILPV--IIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVLPSAIPGI 188

Query: 193 VWNMMMSMS 201
           +  +++S+ 
Sbjct: 189 LSGVILSIG 197



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 14/261 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
             F EN L+        + +      V      GI   +  ++ ++++      ++ +  
Sbjct: 2   RKFKENLLKSLVYLSALFTIVSLVVIVGFIFIKGIGKMNFNFLFSNYSASGDGGILPMII 61

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF--FPLVVS 439
            T++ V+V I++A+ I I   I++         +       + L+  P+ V+  F  +  
Sbjct: 62  TTLYTVLVSIVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFF 121

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V+       +  SL +       I+          P  ++E + +   T ++    ++L
Sbjct: 122 VVTLKMGYSIVAGSLTVAIIILPVIIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVL 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGS 551
           P   P  ++G I + G     S  + + + G +     G+       T        E G 
Sbjct: 182 PSAIPGILSGVILSIGRIIGES-AAILLTAGTVAKMPGGIFDSARTLTVHSYLLTKESGD 240

Query: 552 FPEVVLGVLIMCCFVLALNRF 572
                   +++   VLALN  
Sbjct: 241 IATAASIGIVLIVIVLALNML 261


>gi|221639619|ref|YP_002525881.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|221160400|gb|ACM01380.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 283

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 23/252 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFR 389
           +++  +      +       + G+ + + W+ +  G  V          +      ++  
Sbjct: 19  VRISRSAFSETRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIASSLPV 78

Query: 390 VVVLIIIASIIWIPVGIWIG------------FRPHISSKIQPFAQLLAAFPANVFFPLV 437
           +    +   +     G  IG              P +   + P    +AA P     P++
Sbjct: 79  LWGDFVQTFVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPVL 138

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           V    +   +    + +++ F        N + G +A     +++  ++  +  +    +
Sbjct: 139 VMWFGFDWQSKAAVVVVMVFFPVL----VNTVEGLAATDRMQRDLMKTYSASYAQTLLKL 194

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
            LP   P+   G   A   A   +IV+E            G+G  I+    +     V  
Sbjct: 195 RLPAAMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWA 249

Query: 558 GVLIMCCFVLAL 569
            + +      A 
Sbjct: 250 EIAVAALAGSAF 261



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 19/270 (7%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
             I R + P IF L   ++   ++  L         P  I   +  +L V  L     +T
Sbjct: 29  TRIGRLVVPAIFGLTVLLVWELLVRGLQVPSVILPPPSAIGARIASSLPV--LWGDFVQT 86

Query: 69  TLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            ++  LS  +I        A    +S  L   L+P+ + + ++PI+G     V++F   +
Sbjct: 87  FVKGALSGWLIGCAAAVATAIAIDRSPFLQRGLLPVGNFVAALPIVGIAPVLVMWFGFDW 146

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K     +   F +          +  + L    R   ++ +++  S  Q    L +P 
Sbjct: 147 QSKAAVVVVMVFFPV--------LVNTVEGLAATDRMQRDLMKTYSASYAQTLLKLRLPA 198

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +MP +   + ++ +      + +E         P+ G+G  I+  +    L  +   +  
Sbjct: 199 AMPFIFNGLKIATTLALIGAIVAEFFGS-----PIRGMGFRISAEVGRLGLDMVWAEIAV 253

Query: 248 MLGVIFLY---DQLLFRPMIVWSNKFRLER 274
                  +     L+ R +  W    R +R
Sbjct: 254 AALAGSAFYGVVALVERGLTFWHPSQRRQR 283


>gi|218134888|ref|ZP_03463692.1| hypothetical protein BACPEC_02791 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990273|gb|EEC56284.1| hypothetical protein BACPEC_02791 [Bacteroides pectinophilus ATCC
           43243]
          Length = 292

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 76/200 (38%), Gaps = 8/200 (4%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASR 67
           I R I  +    + F  V     +LL       + +  +   P         S+      
Sbjct: 5   IKRAIGADRIMTVVFYCVAVFFFVLLAAFAGYVIIKGFMGATPEMFRFQRRGSIGNQLFN 64

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   +  +++I++    +     AK  R   L   +   ++ + S+P +    F  + F+
Sbjct: 65  TIYLVFLSLLITVPIGALAGIYLAKYAREGALTKFIRICIETLSSLPSIVVGLFGYLIFL 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +    +  + +A   ++    +  +T +   ++  +P    + S     + WQ  +++ 
Sbjct: 125 VIM--GLDKSLMAGALSVSILTLPLITTTTEDAIRGLPEGYFQASMGLGSTRWQAIFHVL 182

Query: 185 VPFSMPGLVWNMMMSMSGGW 204
           +P  +P ++  ++++   G+
Sbjct: 183 LPACLPRIMTGIILAAGRGF 202



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 6/182 (3%)

Query: 344 LDIFWFCVVCGVAIGIAWQSI-GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           + +F+F ++   A  +  +   G     F +Q    +      T++ V + ++I   I  
Sbjct: 22  VAVFFFVLLAAFAGYVIIKGFMGATPEMFRFQRRGSIGNQLFNTIYLVFLSLLITVPIGA 81

Query: 403 PVGIWIGFRPH---ISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMI 457
             GI++        ++  I+   + L++ P+ V   F  ++  V        +  +L + 
Sbjct: 82  LAGIYLAKYAREGALTKFIRICIETLSSLPSIVVGLFGYLIFLVIMGLDKSLMAGALSVS 141

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             T   I           P  + + +     T W+   +++LP   P  +TG I A G  
Sbjct: 142 ILTLPLITTTTEDAIRGLPEGYFQASMGLGSTRWQAIFHVLLPACLPRIMTGIILAAGRG 201

Query: 518 WN 519
           + 
Sbjct: 202 FG 203


>gi|134096367|ref|YP_001101442.1| phosphate ABC transporter permease [Herminiimonas arsenicoxydans]
 gi|152980578|ref|YP_001354732.1| phosphonate ABC-type transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|133740270|emb|CAL63321.1| putative phosphonates transport system permease protein phnE-like
           [Herminiimonas arsenicoxydans]
 gi|151280655|gb|ABR89065.1| phosphonate ABC-type transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 265

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 68/195 (34%), Gaps = 19/195 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           T    ++   I++L +     LAA +      +      +L+ ++SIP L      V   
Sbjct: 77  TLAMSVAGTSIAVLLSLPLGFLAAHNTTPHPLVYHFARTLLNGLRSIPELIMGIIFVAAV 136

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                  V+   L ++  I             +++ +  +   E +R+   S  Q  ++ 
Sbjct: 137 GFGALPGVLALALHSVGMIAKF--------FAEAIEHTDQAPIEAARAAGCSPLQVIFHG 188

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P  +P +    +      +       M+  G       GIG  +  +++      +  
Sbjct: 189 VLPQVLPQMADTAIYRWEYNFRASTVMGMVGAG-------GIGFELMGSLRIMQYQEVSA 241

Query: 244 AMLTMLGVIFLYDQL 258
            ++ +L ++ L D  
Sbjct: 242 ILIVILAMVTLVDGF 256



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 19/193 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T+   V    IA ++ +P+G          P +    +     L + P  +   + V+ V
Sbjct: 77  TLAMSVAGTSIAVLLSLPLGFLAAHNTTPHPLVYHFARTLLNGLRSIPELIMGIIFVAAV 136

Query: 442 SYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            +  L   L L+L  + +    +                  E A +   +  +   + +L
Sbjct: 137 GFGALPGVLALALHSVGMIAKFF------AEAIEHTDQAPIEAARAAGCSPLQVIFHGVL 190

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P + P     AI      + AS V  +   G       G+G  +  S     + EV   +
Sbjct: 191 PQVLPQMADTAIYRWEYNFRASTVMGMVGAG-------GIGFELMGSLRIMQYQEVSAIL 243

Query: 560 LIMCCFVLALNRF 572
           +++   V  ++ F
Sbjct: 244 IVILAMVTLVDGF 256


>gi|307941518|ref|ZP_07656873.1| phosphate ABC transporter, permease protein PstA [Roseibium sp.
           TrichSKD4]
 gi|307775126|gb|EFO34332.1| phosphate ABC transporter, permease protein PstA [Roseibium sp.
           TrichSKD4]
          Length = 446

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +    +      +   I   +  + ++P + F    +  F+
Sbjct: 226 SFFMMLVVLFLSLPIGVAASIYLEEFAPQNKITDLIEVNISNLAAVPSIVFGILGLAVFI 285

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +      A L     +    +  +  S   SL  +P  + + +     S  Q  ++  
Sbjct: 286 Q-FMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGIGASKMQAVFHHV 344

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P +MPG++   ++ ++  
Sbjct: 345 LPLAMPGILTGTIIGLAQA 363



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 86/254 (33%), Gaps = 27/254 (10%)

Query: 344 LDIFWFCVVCGVAIGIA-WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           LDI    V  G+ + +  W  I    +         +      + F ++V++ ++  I +
Sbjct: 183 LDIVDALVKAGIIVNVFNWDFITGADSGVDNPGGAGIGASVVGSFFMMLVVLFLSLPIGV 242

Query: 403 PVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLM 456
              I++      +            LAA P+ VF  L ++    +   P    L   L++
Sbjct: 243 AASIYLEEFAPQNKITDLIEVNISNLAAVPSIVFGILGLAVFIQFMHLPQSAPLVGGLVL 302

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              T   I+ +  A   A P   ++ A     +  +   + +LP   P  +TG I     
Sbjct: 303 TLMTLPTIIISTRASLKAVPPSIRDAALGIGASKMQAVFHHVLPLAMPGILTGTIIGLAQ 362

Query: 517 AWNASIVSEVASWGHIHLRTTGL------GA-----------YIAESTEKGS-FPEVVLG 558
           A      + +   G +     G       G            Y   +    + + +   G
Sbjct: 363 A--LGETAPLLLIGMVGFVARGYPDGIVQGFIDPNSAMPAQIYTWAARADFAFYEKAWGG 420

Query: 559 VLIMCCFVLALNRF 572
           ++++  F+L +N  
Sbjct: 421 IIVLLVFLLTMNIL 434


>gi|301169337|emb|CBW28936.1| DL-methionine transporter subunit [Haemophilus influenzae 10810]
          Length = 229

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 18/220 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
           +       T Q    V      T++      ++A ++ +PVG+W        I       
Sbjct: 6   LATFSQQLTPQMWGVVATATYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTH 65

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             +     +  + P  +   +++         +       + +      ++         
Sbjct: 66  FVLNTIINIGRSIPFIILLLILLPVTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALM 125

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             PN   E A +   T W+  R   LP   P  + G           S ++     G + 
Sbjct: 126 EIPNGLTEAAQAMGATKWQIIRKFYLPEALPTLINGITLTLVTLVGYSAMAGTQGGGGLG 185

Query: 534 LRTTGLGAYIAESTEKGSFPEV-VLGVLIMCCFVLALNRF 572
                 G Y        + P V  +  +I+  FV+   + 
Sbjct: 186 SLAINYGVY-------RNMPYVTWVATIIIVLFVMISQKL 218



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T     ++ ++++L                  ++ R   VL  I++I +SIP +  L
Sbjct: 25  TYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTHFVLNTIINIGRSIPFIILL 84

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +   +  +    +    AAI  +    +  +      +L  IP  L E +++   + 
Sbjct: 85  LILLP--VTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALMEIPNGLTEAAQAMGATK 142

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P ++P L+  + +++
Sbjct: 143 WQIIRKFYLPEALPTLINGITLTL 166


>gi|300865324|ref|ZP_07110136.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
 gi|300336691|emb|CBN55286.1| Binding-protein-dependent transport systems inner membrane
           component [Oscillatoria sp. PCC 6506]
          Length = 287

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 8/163 (4%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   +    +S+ ++ L F    A   A+ R  G  +     I+ S+ I+      +++ 
Sbjct: 78  YILNSAFVSISSTLLCLAFGAPAAYALARLRLWGEKI-----ILASVTIVTLFPGVLLFL 132

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKF 180
             L   K +      +  I      N+  ++         +P+DLE+ ++    + +Q  
Sbjct: 133 GLLEIVKALNLGNNYLALIIPYTAINLPLTILVMRSFFQQLPKDLEDAAKIDGYNTFQML 192

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           W + +P ++P L+   +++    W   + +   +  +++  +P
Sbjct: 193 WQIILPITLPALITTGILTFICAWNEFIFALTFITRESMKTIP 235



 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 52/172 (30%), Gaps = 18/172 (10%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLI------IIASIIWIPVGIWIGFRPHISSKIQ 419
           YI    T+   L +      T++ +          ++      P    +        KI 
Sbjct: 56  YIPRQITFDHYLSLFRRRPFTLYILNSAFVSISSTLLCLAFGAPAAYALARLRLWGEKI- 114

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA------- 472
               +LA+      FP V+  +    +   L L    +     Y   N+           
Sbjct: 115 ----ILASVTIVTLFPGVLLFLGLLEIVKALNLGNNYLALIIPYTAINLPLTILVMRSFF 170

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
              P D ++ A       ++    IILP   P  +T  I     AWN  I +
Sbjct: 171 QQLPKDLEDAAKIDGYNTFQMLWQIILPITLPALITTGILTFICAWNEFIFA 222


>gi|57641737|ref|YP_184215.1| ABC-type dipeptide/oligopeptide transport system, permease
           component [Thermococcus kodakarensis KOD1]
 gi|57160061|dbj|BAD85991.1| ABC-type dipeptide/oligopeptide transport system, permease
           component [Thermococcus kodakarensis KOD1]
          Length = 473

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 13/184 (7%)

Query: 362 QSIGYIVNHFTYQDVL-YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQ 419
           ++ G++   F  +D+L  +IW   +++   V + + + +I I  G+   +        + 
Sbjct: 244 RTYGWLGTDFKGRDLLAGIIWGSRVSLAIGVSVAVFSVLIGIFYGVTSAYFGGWTDEMMM 303

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF---- 475
            F + +A+ P+    P+++   +Y+  + +LW  +L++    W     V   A +     
Sbjct: 304 RFQEFMASIPSL---PILILMGTYFGGHISLWQIVLLLVVFGW---VGVARVARSMALQI 357

Query: 476 -PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
               + E A     +  R     ++P + PY          GA  +         G    
Sbjct: 358 KEQTYVEAARVLGASTGRIIFKHMVPQLLPYAFASMALGVPGAVLSEASLSFLGLGDPTA 417

Query: 535 RTTG 538
            T G
Sbjct: 418 VTWG 421



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 20/174 (11%)

Query: 77  VISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           V S+L    Y   +A        +++   + M SIP L  L     YF            
Sbjct: 278 VFSVLIGIFYGVTSAYFGGWTDEMMMRFQEFMASIPSLPILILMGTYFGGH-------IS 330

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRD--LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           L  I  +     W     + +S+    ++    E +R    S  +  +   VP  +P   
Sbjct: 331 LWQIVLLLVVFGWVGVARVARSMALQIKEQTYVEAARVLGASTGRIIFKHMVPQLLPYAF 390

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
            +M + + G           V+ +  +   G+G   A+   +    A      T
Sbjct: 391 ASMALGVPGA----------VLSEASLSFLGLGDPTAVTWGQILHDAQAAGAAT 434


>gi|314933566|ref|ZP_07840931.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           caprae C87]
 gi|313653716|gb|EFS17473.1| phosphate ABC transporter, permease protein PstC [Staphylococcus
           caprae C87]
          Length = 308

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 106/294 (36%), Gaps = 24/294 (8%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-----VH 59
           N      S +I P I  +++ + ++  I IL   + ET      V      L        
Sbjct: 15  NAKKGGASDKIVPIILGIISAISILTTIAILFTLLTETITFFTRVPFSKFFLTGTWNPTG 74

Query: 60  SLPQYASRTTL-RMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPI 112
           S P+Y     +   L    I+ + +      AA       S R   ++ PIL+I+  IP 
Sbjct: 75  SNPEYGIWALIIGTLKITFIATIVSVPIGLGAAIYLNEYASDRTRRIIKPILEILAGIPT 134

Query: 113 LGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
           + F    LTF      ++ PG      ++    +    V  +T     ++ ++P  + E 
Sbjct: 135 IVFGFFALTFVTPILRSIIPGLGEFNSISPGIVVGIMIVPIITSLSEDAMSSVPNKIREG 194

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--- 225
           +     + ++    + +P +  G+V ++++ +S      +   +         L      
Sbjct: 195 AFGLGATKFEVATKVVLPAATSGVVASIVLGVSRAIGETMIVSLAAGSTPTSSLSLTSSI 254

Query: 226 ----GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
               G  + +A  +    + +Y  +  +G       ++   +  W S +FR E 
Sbjct: 255 QTMTGYIVEVATGDAPFGSDIYYSIYAVGFTLFIFTIIMNLLSQWISKRFREEY 308



 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 21/173 (12%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQ 423
           + T  +  Y IW   I   ++     IA+I+ +P+G+                 I+P  +
Sbjct: 71  NPTGSNPEYGIWALIIGTLKITF---IATIVSVPIGLGAAIYLNEYASDRTRRIIKPILE 127

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           +LA  P  VF         P++ S +       ++   +++       I        S+ 
Sbjct: 128 ILAGIPTIVFGFFALTFVTPILRSIIPGLGEFNSISPGIVVGIMIVPIITSLSEDAMSSV 187

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGI----FPYYVTGAITACGGAWNASIVS 524
           PN  +E A     T +     ++LP          V G   A G     S+ +
Sbjct: 188 PNKIREGAFGLGATKFEVATKVVLPAATSGVVASIVLGVSRAIGETMIVSLAA 240


>gi|154503003|ref|ZP_02040063.1| hypothetical protein RUMGNA_00825 [Ruminococcus gnavus ATCC 29149]
 gi|153796357|gb|EDN78777.1| hypothetical protein RUMGNA_00825 [Ruminococcus gnavus ATCC 29149]
          Length = 193

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A++ +     +     ++  +    ++ + ++  +IP +  L   + +          
Sbjct: 30  LVAILCAGSIGLLLGIWISEHEKAAGPVLGVANVFYTIPSISLLGMLIPFLGIGNT---- 85

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                A+ A+    +  M  + Y  +  +  ++   + +   +  Q  W + +P +M  +
Sbjct: 86  ----TAVAALTIYGIMPMVRNTYAGIKGVSEEIILAAEAMGSTRMQIMWKIKLPLAMGVI 141

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +  +          VV +  +    + I   G+G  I   I
Sbjct: 142 IAGVR-------NMVVMTISVAAIASFIGAGGLGVAIYRGI 175



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V I+ A  I + +GIWI      +  +   A +    P+     +++  +   +     
Sbjct: 30  LVAILCAGSIGLLLGIWISEHEKAAGPVLGVANVFYTIPSISLLGMLIPFLGIGNTTAVA 89

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  I      ++ N  AG      +    A +   T  +    I LP      + G 
Sbjct: 90  ALTIYGIM----PMVRNTYAGIKGVSEEIILAAEAMGSTRMQIMWKIKLPLAMGVIIAGV 145

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                   N  +++   +     +   GLG  I
Sbjct: 146 R-------NMVVMTISVAAIASFIGAGGLGVAI 171


>gi|282164552|ref|YP_003356937.1| phosphate ABC transporter permease protein [Methanocella paludicola
           SANAE]
 gi|282156866|dbj|BAI61954.1| phosphate ABC transporter permease protein [Methanocella paludicola
           SANAE]
          Length = 287

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 14/179 (7%)

Query: 94  RRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149
           R    +L P ++ +  IP + +    L   V + MN   G  +      I          
Sbjct: 98  RWSRDILKPAIETLAGIPSVVYGFFGLILIVPFIMNNLGGGGLSVLACGIVLAIMILPTI 157

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           ++ S   +L ++P++  E S +   + WQ    + VP +  G++ + ++ M       +A
Sbjct: 158 ISISE-DALRSVPKEYREGSLAIGATKWQMIAGIVVPAARSGILASAILGMGRAIGETMA 216

Query: 210 SEMIVVGDTVIPLPGIGSYI---------ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             M+     +IP   + S                     A+    + +L +I L +  +
Sbjct: 217 VWMVSGNTRLIPTSLLSSVAPMSSQIALEWNYASGDHRTALFAIGIVLLAIIMLLNLAV 275



 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 20/177 (11%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
                 ++P  + LA  P+ V+         P +++ +    L+      +L I      
Sbjct: 98  RWSRDILKPAIETLAGIPSVVYGFFGLILIVPFIMNNLGGGGLSVLACGIVLAIM--ILP 155

Query: 464 ILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            + ++      + P +++E + +   T W+    I++P      +  AI   G A   ++
Sbjct: 156 TIISISEDALRSVPKEYREGSLAIGATKWQMIAGIVVPAARSGILASAILGMGRAIGETM 215

Query: 523 VSEVASWGHIHLRTTGLG---------AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              + S     + T+ L          A             +    +++   ++ LN
Sbjct: 216 AVWMVSGNTRLIPTSLLSSVAPMSSQIALEWNYASGDHRTALFAIGIVLLAIIMLLN 272


>gi|258645412|ref|ZP_05732881.1| D-methionine ABC transporter, permease protein [Dialister invisus
           DSM 15470]
 gi|260402763|gb|EEW96310.1| D-methionine ABC transporter, permease protein [Dialister invisus
           DSM 15470]
          Length = 217

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L +  + T   +  +  I+         L   + + G++  PI++        +++SIP 
Sbjct: 9   LLKSLAETLYMLSISAFIAAAAGIPLGILLVVTEKNGILSCPIINKPLAFIVNVIRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++    L  G  IG   AAI  +  + +      +  S+  IP  L E + S 
Sbjct: 68  FIILMVAIIPLTRLIAGTSIGTT-AAIVPLTLAAIPYTARMVETSIREIPSGLIEAAESM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S +Q    + +P ++P ++ NM
Sbjct: 127 GASPFQIIRKVLIPEALPSVIQNM 150



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 55/157 (35%), Gaps = 12/157 (7%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPA 430
           ++     T++ + +   IA+   IP+GI +           P I+  +     ++ + P 
Sbjct: 9   LLKSLAETLYMLSISAFIAAAAGIPLGILLVVTEKNGILSCPIINKPLAFIVNVIRSIPF 68

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            +   + +  ++      ++  +  ++        Y    V       P+   E A S  
Sbjct: 69  IILM-VAIIPLTRLIAGTSIGTTAAIVPLTLAAIPYTARMVETSIREIPSGLIEAAESMG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            + ++  R +++P   P  +            +S ++
Sbjct: 128 ASPFQIIRKVLIPEALPSVIQNMTVVIVSLIGSSAMA 164


>gi|218130806|ref|ZP_03459610.1| hypothetical protein BACEGG_02400 [Bacteroides eggerthii DSM 20697]
 gi|317474327|ref|ZP_07933603.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides eggerthii 1_2_48FAA]
 gi|217987150|gb|EEC53481.1| hypothetical protein BACEGG_02400 [Bacteroides eggerthii DSM 20697]
 gi|316909637|gb|EFV31315.1| binding-protein-dependent transport system inner membrane component
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 262

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 94/261 (36%), Gaps = 22/261 (8%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +   F+ RR +   + L   + VI  ++ I+L+   +      + +     +   ++   
Sbjct: 1   MKSFFMRRRNWTLPYALFLLIFVIVPLLLIVLYAFTDAEGAFTLANFRKFMMHPEAM-NT 59

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
              +    +   +  LL  +  A + ++ +          +  Q++ +L  L   V   +
Sbjct: 60  FIYSIGIAIITTLACLLLGYPAAYILSQKQ---------FNTSQTMVVLFILPMWVNILI 110

Query: 125 NLYPGKVIGAEL-------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                  +   L       A +F +  + +  M + +Y +L  +   L E ++    +  
Sbjct: 111 RTLATVALFDFLNLPLGEGALLFGMVYNFLPFMIYPIYNTLQKMDHSLIEAAQDLGATPL 170

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F  + +P SMPG++  ++M           +E++ + +  +     G+ +   I    
Sbjct: 171 QIFGKVILPLSMPGIMSGIVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENIYNGM 226

Query: 238 LLAILYAMLTMLGVIFLYDQL 258
                   L ML +I +    
Sbjct: 227 WNYGAALSLIMLLLIGVTILF 247



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 6/147 (4%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L+        F  +   +    L   +  + L       Y ++N +       +   E A
Sbjct: 109 LIRTLATVALFDFLNLPLGEGALLFGMVYNFLPFMI---YPIYNTL---QKMDHSLIEAA 162

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                T  + +  +ILP   P  ++G +       +   ++E+ +  +I L  T +   I
Sbjct: 163 QDLGATPLQIFGKVILPLSMPGIMSGIVMVFMPTVSTFAIAELLTMNNIKLFGTTVQENI 222

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
                       ++ +L++   +L  N
Sbjct: 223 YNGMWNYGAALSLIMLLLIGVTILFTN 249


>gi|329929181|ref|ZP_08282967.1| phosphate ABC transporter, permease protein PstC [Paenibacillus sp.
           HGF5]
 gi|328936858|gb|EGG33293.1| phosphate ABC transporter, permease protein PstC [Paenibacillus sp.
           HGF5]
          Length = 297

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 103/290 (35%), Gaps = 24/290 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP------ 62
             IS +I P +  L A + V   I I+   +QE+ +    V +          P      
Sbjct: 8   TRISDKIIPILLGLCAMLSVFTTIGIVYTLLQESVIFFKEVPVWSFLTGTTWSPILPPKE 67

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF- 115
                     L    I+++F        A         R+  V+ P+L+++  +P + + 
Sbjct: 68  FGVLPLLGGTLLITGIAIIFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVPTIVYG 127

Query: 116 ---LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L     +   ++P   I   L+A   +    +  ++     ++  +P+ L   + + 
Sbjct: 128 YFALETVTPFLQKIFPDMGIFNALSAGLVVGIMVLPMISSLSEDAMRAVPKSLRHGAYAL 187

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI------- 225
             + ++    + +P ++ G+V + +++ S      +   +       + L  +       
Sbjct: 188 GATRFEVALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLESIQTMT 247

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
              + +++ +     I Y  +  +G+       L   +  W + +FR E 
Sbjct: 248 SYIVQVSMGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFREEY 297



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 91/293 (31%), Gaps = 23/293 (7%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375
             R+   I        L LC+   V   + I +  +   V          ++        
Sbjct: 3   FRRSKTRISDKIIPILLGLCAMLSVFTTIGIVYTLLQESVIFFKEVPVWSFLTGTTWSPI 62

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFP 429
           +    +     +   +++  IA I  +P+G+             +   ++P  ++LA  P
Sbjct: 63  LPPKEFGVLPLLGGTLLITGIAIIFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVP 122

Query: 430 ANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
             V+         P +        +   L   L++       I         A P   + 
Sbjct: 123 TIVYGYFALETVTPFLQKIFPDMGIFNALSAGLVVGIMVLPMISSLSEDAMRAVPKSLRH 182

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-- 539
            A +   T +     I+LP      V+  + A   A   +++  VA+     L    L  
Sbjct: 183 GAYALGATRFEVALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLES 242

Query: 540 ----GAYIAESTEKGSFPE--VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                +YI + +  G  P   +  G +      L +  FL + L  +  R  R
Sbjct: 243 IQTMTSYIVQVS-MGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFR 294


>gi|326392746|ref|ZP_08214029.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
 gi|325991212|gb|EGD49921.1| binding-protein-dependent transport systems inner membrane
           component [Thermoanaerobacter ethanolicus JW 200]
          Length = 139

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 66/131 (50%), Gaps = 3/131 (2%)

Query: 94  RRLGMVLVPILDIMQSIPIL--GFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           +    +L P ++I   IP +  G++  TV+  F++ + G +  + LA I  +    +  +
Sbjct: 6   KIRTKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTI 65

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210
           T     ++ ++P ++ E S +   + WQ   ++ +P +  G++  +++ ++  +   +A 
Sbjct: 66  TSVSTDAIRSLPVEIREASYALGATRWQTIRHVVIPAAKSGILTAIILGLARAFGEALAV 125

Query: 211 EMIVVGDTVIP 221
           +M++    VIP
Sbjct: 126 QMVIGNRPVIP 136



 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNV- 468
             +QP  ++    P+ V+  + ++ +       +  L  +L   +L++       + +V 
Sbjct: 10  KILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTIMTLPTITSVS 69

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                + P + +E + +   T W+  R++++P      +T  I     A+  ++  ++  
Sbjct: 70  TDAIRSLPVEIREASYALGATRWQTIRHVVIPAAKSGILTAIILGLARAFGEALAVQMVI 129

Query: 529 WGHIHLRTT 537
                +  +
Sbjct: 130 GNRPVIPKS 138


>gi|312138327|ref|YP_004005663.1| phosphate ABC transporter transmembrane protein [Rhodococcus equi
           103S]
 gi|325674756|ref|ZP_08154443.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|311887666|emb|CBH46978.1| putative phosphate ABC transporter integral membrane subunit
           [Rhodococcus equi 103S]
 gi|325554342|gb|EGD24017.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 301

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 5/156 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILD 105
           +  +  + +   +      T ++ L    +S+      A      A + RLG +   ++D
Sbjct: 68  LSGLSASAEGGGIYHALIGTLMQGLVCAALSVPLGLFVAVYLVEYAGNSRLGKLTTFMVD 127

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I+  +P +    F    ++  +      +  A   A+    V  +  S  + L  +P DL
Sbjct: 128 ILSGVPSIVAALFIYALWIATF--GFPKSAFAVSLALVLLMVPVVVRSTEEMLRIVPDDL 185

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            E S +  +  W+    + VP ++PG++  +M++++
Sbjct: 186 REASYALGVPKWKTIARIVVPTALPGIITGVMLALA 221



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 49/129 (37%), Gaps = 9/129 (6%)

Query: 395 IIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYYH 445
           ++ + + +P+G+++            +         +L+  P+     F   +   ++  
Sbjct: 92  LVCAALSVPLGLFVAVYLVEYAGNSRLGKLTTFMVDILSGVPSIVAALFIYALWIATFGF 151

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                 +SL ++      ++ +        P+D +E + +  +  W+    I++P   P 
Sbjct: 152 PKSAFAVSLALVLLMVPVVVRSTEEMLRIVPDDLREASYALGVPKWKTIARIVVPTALPG 211

Query: 506 YVTGAITAC 514
            +TG + A 
Sbjct: 212 IITGVMLAL 220


>gi|302541210|ref|ZP_07293552.1| ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302458828|gb|EFL21921.1| ABC transporter, permease [Streptomyces himastatinicus ATCC 53653]
          Length = 267

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 9/163 (5%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  V+  I++I +S+P    L   ++ F     G  IG   AAI  +    +      + 
Sbjct: 53  VNKVVGQIVNIARSMP-FIILMVALISFTRAIVGTTIGP-AAAIVPLAIGAIPFYARLVE 110

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            S+  +   L E  +S   S W     + +P S+P L       +S     +VA      
Sbjct: 111 TSVREVDGGLVEAVQSMGGSTWTVVRKVLLPESLPSL-------ISSATTTIVALIGYSA 163

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               +   G+G        ++    +++  + +L V+    Q 
Sbjct: 164 MAGTVGAGGLGDLAVRYGYQRFETELMWITVAILAVVISVIQF 206



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 11/165 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFN 467
              ++  +     +  + P  +    ++S    +    + P   +  L I    +Y    
Sbjct: 50  NVVVNKVVGQIVNIARSMPFIILMVALISFTRAIVGTTIGPAAAIVPLAIGAIPFYARL- 108

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V            E   S   + W   R ++LP   P  ++ A T        S ++   
Sbjct: 109 VETSVREVDGGLVEAVQSMGGSTWTVVRKVLLPESLPSLISSATTTIVALIGYSAMAGTV 168

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G       GLG        +    E++   + +   V+++ +F
Sbjct: 169 GAG-------GLGDLAVRYGYQRFETELMWITVAILAVVISVIQF 206


>gi|282932187|ref|ZP_06337635.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 208-1]
 gi|297206383|ref|ZP_06923778.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|281303674|gb|EFA95828.1| phosphate ABC transporter, permease protein PstC [Lactobacillus
           jensenii 208-1]
 gi|297149509|gb|EFH29807.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 299

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 6/169 (3%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSI 110
           P      +LP     + +  L A +I+  F  + A        +  G +L PI++++  +
Sbjct: 70  PSHNSFGALP-MIVTSFVVTLLAGIIAAPFALIIALAINEIFPKWFGKILQPIIELLVGV 128

Query: 111 PILGFL---TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           P + +       +   +  + G      LAA+  +F   +  M   M  SL   P++   
Sbjct: 129 PSVVYGFAGLILITPVLRGFFGGSGFGILAAVVVLFMMILPTMVSMMVDSLRATPKNFRT 188

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            S     + WQ    + +P +  GL+  ++  M+  +   +A +M++  
Sbjct: 189 ASYDLGATRWQTLHMVVIPSAKGGLLTAIIFGMTRAFGEALAVQMVIGN 237



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSC 440
            V+ ++A II  P  + I               +QP  +LL   P+ V+      L+   
Sbjct: 85  FVVTLLAGIIAAPFALIIALAINEIFPKWFGKILQPIIELLVGVPSVVYGFAGLILITPV 144

Query: 441 V--SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   +      +  +++++F      +   ++    A P +F+  +     T W+    +
Sbjct: 145 LRGFFGGSGFGILAAVVVLFMMILPTMVSMMVDSLRATPKNFRTASYDLGATRWQTLHMV 204

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++P      +T  I     A+  ++  ++       +   
Sbjct: 205 VIPSAKGGLLTAIIFGMTRAFGEALAVQMVIGNAALMPKN 244


>gi|182437724|ref|YP_001825443.1| putative phosphate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326778360|ref|ZP_08237625.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptomyces cf. griseus XylebKG-1]
 gi|178466240|dbj|BAG20760.1| putative phosphate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326658693|gb|EGE43539.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptomyces cf. griseus XylebKG-1]
          Length = 360

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 99/286 (34%), Gaps = 13/286 (4%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  S   F  +S     +       R     + + +C    V  +  + W  +V G   
Sbjct: 59  WGLISALLFLAISYVATTIVENQRQARDRLATSVMWVCFLVAVVPLASLLWTTIVRGSER 118

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--IS 415
              +     +      +    V      T+ +V +  +I++ + +   +++       ++
Sbjct: 119 LDGYFLTHSMAGVLGSEASGGVYHALIGTLEQVGIATVISAPLGLLTAVYLVEYGKGSLA 178

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASA 474
             +  F  ++   P+ V    ++S +  + L P+  +  L +      ++  +       
Sbjct: 179 RAVTFFVDVMTGIPSIVAGLFILSIMLMFSLEPSGLMGALALTILMVPVVVRSTEEMLKL 238

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            PN+ +E + +  I  WR    ++LP       TG + A       +    +  +G   +
Sbjct: 239 VPNELREASLALGIPKWRTILKVVLPTAIGGITTGVMLAIARIAGETAPIILLVFGSQLI 298

Query: 535 RT-------TGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALN 570
            T       + L  YI E    G   S+       L++  FV+ LN
Sbjct: 299 NTNPFEGAQSSLPFYIYEQYRIGEAASYDRAWAAALVLIAFVMILN 344



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 80/212 (37%), Gaps = 18/212 (8%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           T  ++  A VIS     + A    +  +  L   +   +D+M  IP +  G    +++  
Sbjct: 147 TLEQVGIATVISAPLGLLTAVYLVEYGKGSLARAVTFFVDVMTGIPSIVAGLFILSIMLM 206

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            +L P  ++GA    I  +       +  S  + L  +P +L E S +  +  W+    +
Sbjct: 207 FSLEPSGLMGALALTILMVPV-----VVRSTEEMLKLVPNELREASLALGIPKWRTILKV 261

Query: 184 GVPFSMPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALA--IK 234
            +P ++ G+   +M++++            V  S++I           +  YI     I 
Sbjct: 262 VLPTAIGGITTGVMLAIARIAGETAPIILLVFGSQLINTNPFEGAQSSLPFYIYEQYRIG 321

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           E       +A   +L    +   L+ R +  W
Sbjct: 322 EAASYDRAWAAALVLIAFVMILNLVARGIARW 353


>gi|160936564|ref|ZP_02083931.1| hypothetical protein CLOBOL_01454 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440355|gb|EDP18100.1| hypothetical protein CLOBOL_01454 [Clostridium bolteae ATCC
           BAA-613]
          Length = 301

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            + +L+ GI+  +            +      T     +      T   ++  ++I+   
Sbjct: 41  FSILLLAGIMGYVFVRGIPHVTWAFLSTASSATKGTFGILGNIINTLYIVIITLLIATPL 100

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      AK  ++  ++    + +  IP + F  F +V+F N           A  
Sbjct: 101 GIGSAVYLNEYAKPGKVVRLIEFTTETLSGIPSIIFGLFGMVFFGNALGLGYSILTGALT 160

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I    +  +T +  ++L  +P      +     + W     + +P +MPG++  ++++
Sbjct: 161 LTIMILPL--ITRTTQEALKTVPDSYRHGALGIGATKWYMIRTILLPSAMPGILTGIILA 218

Query: 200 MS 201
           + 
Sbjct: 219 IG 220



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT----------- 386
            R    LD+F   V+     G +   +  I+ +   + + +V W    T           
Sbjct: 21  GRRVRGLDVF-LTVIIYTCAGFSILLLAGIMGYVFVRGIPHVTWAFLSTASSATKGTFGI 79

Query: 387 ---MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
              +   + ++II  +I  P+GI              +   I+   + L+  P+ +F   
Sbjct: 80  LGNIINTLYIVIITLLIATPLGIGSAVYLNEYAKPGKVVRLIEFTTETLSGIPSIIFGLF 139

Query: 437 VVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWW 494
            +        L  ++    L +      ++           P+ ++  A     T W   
Sbjct: 140 GMVFFGNALGLGYSILTGALTLTIMILPLITRTTQEALKTVPDSYRHGALGIGATKWYMI 199

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           R I+LP   P  +TG I A G     S      +    +L   
Sbjct: 200 RTILLPSAMPGILTGIILAIGRIVGESAALLFTAGSGYYLPKN 242


>gi|327334987|gb|EGE76698.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL097PA1]
          Length = 215

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 21/219 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   +  ++ +++SLL +      A ++R    +LVP   +L  + S+
Sbjct: 6   ISENWDQIWQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVLLPLIL--------GTKILDPINVVVALTLYSIALLVRTATDAFDSVGRSVRRDAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              +      I   ++  L +  ++D ++    R +  W
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLTPW 209



 Score = 38.0 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 14/171 (8%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F L+   +    L+P   +  L    T +
Sbjct: 37  PLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVVAL----TLY 92

Query: 463 YILFNVIAGASAFP---NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            I   V     AF       +  A +   +  + +  + LP   P  V G         +
Sbjct: 93  SIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLS 152

Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 153 LVSVGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFD 196


>gi|228947983|ref|ZP_04110269.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228811673|gb|EEM58008.1| ABC transporter permease protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 286

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)

Query: 5   NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQ 63
           N+   F+  RI+  +F +     ++ ++ +L    ++      +       + +      
Sbjct: 10  NMASRFLKDRIYKLLFYIAILFSIVILLILLFQIFEKGISYLSLEFFTNFASRNPKEAGI 69

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTF 118
            A+ +   +  ++VI + F F   T       AK      V+      +  +P + F   
Sbjct: 70  AAALSGTILFMSIVIPVSFIFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGLL 129

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F+      +  + +AA   +    +  +  +  +++ ++P  L E S     + WQ
Sbjct: 130 GLTIFVYAL--HLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLLEASYGLGATKWQ 187

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
             + + +P++ PG++    +++S  
Sbjct: 188 TMYRIVLPYAFPGIITGCTLAISRA 212



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + PN   
Sbjct: 116 QTLAGVPSVVFGLLGLTIFVYALHLGESIIAAALTMSLLVLPTVVVASQEAIRSVPNSLL 175

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    I+LP  FP  +TG   A   A
Sbjct: 176 EASYGLGATKWQTMYRIVLPYAFPGIITGCTLAISRA 212


>gi|218282837|ref|ZP_03488990.1| hypothetical protein EUBIFOR_01576 [Eubacterium biforme DSM 3989]
 gi|218216293|gb|EEC89831.1| hypothetical protein EUBIFOR_01576 [Eubacterium biforme DSM 3989]
          Length = 229

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 84/200 (42%), Gaps = 21/200 (10%)

Query: 78  ISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVV-------------- 121
           I+++ TF+   L A     R    L  I D + ++P++  L  TV               
Sbjct: 20  ITIVITFILGLLTAWWIYSRKSEALKMIFDGIFTLPMV--LPPTVAGFFLLMIFGVNQPI 77

Query: 122 --YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
             +FMN++  ++  +  A + A        M  +   +   +  DL   +R+  +S W  
Sbjct: 78  GKFFMNVFGVRIAFSFSATVIAAVVISFPLMYRNSRGAFEQVDTDLVYAARTLGMSEWNI 137

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P ++PG++   +++ + G     A+ M+  G+ +     +   +   +   D+ 
Sbjct: 138 FLKVLIPNALPGIISGGVLAFARGLGEFGATAMLA-GNIIGKTRTLPVAVYSEVMSGDME 196

Query: 240 AILYAMLTMLGVIFLYDQLL 259
           +  + +  ++G+ F+   LL
Sbjct: 197 SAAFYVWVIIGICFIAVILL 216



 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 42/151 (27%), Gaps = 3/151 (1%)

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
             ++              +  +  +   +  N          D    A +  ++ W  + 
Sbjct: 80  FFMNVFGVRIAFSFSATVIAAVVISFPLMYRNSRGAFEQVDTDLVYAARTLGMSEWNIFL 139

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++P   P  ++G + A          + + + G+I  +T  L   +      G     
Sbjct: 140 KVLIPNALPGIISGGVLAFARGLGEFGATAMLA-GNIIGKTRTLPVAVYSEVMSGDMES- 197

Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                +     +     +   LY    R  R
Sbjct: 198 -AAFYVWVIIGICFIAVILLNLYQLYVRKKR 227


>gi|187924477|ref|YP_001896119.1| peptide ABC transporter inner membrane protein [Burkholderia
           phytofirmans PsJN]
 gi|187715671|gb|ACD16895.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 368

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 17/194 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +  L   ++ +    V      ++  +G  L   ++I  ++P L  L      F    P
Sbjct: 167 LVLTLIGTILGIAAGAVQGYFGGRTDIVGQRL---IEIWSAMPELYLLIIFSSIF---EP 220

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           G ++   L ++F       W +  S Y     L N  +D    +R+  LS WQ  W   +
Sbjct: 221 GFILLIVLLSLFG------W-IGLSDYVRAEFLRNRHQDYVRAARAMGLSNWQIMWRHVL 273

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +   MSG    + + + + +G    P P +G  +A      D   I  + 
Sbjct: 274 PNSLTPVITFLPFRMSGAILALTSLDFLGLGVPS-PTPSLGELLAQGKANLDAWWISLST 332

Query: 246 LTMLGVIFLYDQLL 259
             +L  + L    +
Sbjct: 333 FGVLVAMLLLLTFM 346



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 8/198 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI-QPFAQLLAAFPANVFF 434
              +++   +++   +VL +I +I+ I  G   G+    +  + Q   ++ +A P     
Sbjct: 152 FARLLYGFRVSVEFGLVLTLIGTILGIAAGAVQGYFGGRTDIVGQRLIEIWSAMPELYLL 211

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +  S      +   + LSL    G   Y+             D+   A +  ++ W+  
Sbjct: 212 IIFSSIFEPGFILLIVLLSLFGWIGLSDYVR---AEFLRNRHQDYVRAARAMGLSNWQIM 268

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS--- 551
              +LP      +T       GA  A    +    G +   T  LG  +A+         
Sbjct: 269 WRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG-VPSPTPSLGELLAQGKANLDAWW 327

Query: 552 FPEVVLGVLIMCCFVLAL 569
                 GVL+    +L  
Sbjct: 328 ISLSTFGVLVAMLLLLTF 345


>gi|220929518|ref|YP_002506427.1| phosphate ABC transporter inner membrane subunit PstA [Clostridium
           cellulolyticum H10]
 gi|219999846|gb|ACL76447.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           cellulolyticum H10]
          Length = 284

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 21/197 (10%)

Query: 76  MVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           +++++LF        A       K+ R    +   +  +   P + +    +  F+    
Sbjct: 73  ILLTILFAVPIGLGTAVYLEEYAKNNRFTKFIKINISNLSGTPSIVYGLLGLTVFVKTLG 132

Query: 129 GKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +G  + A     +  V  +   S  +++  +P+ L   S +   + WQ    + +P 
Sbjct: 133 ---LGKSIVAGALTMSLVVLPIVIVSSQEAIKAVPQYLRHGSYALGATKWQTIRKIVIPT 189

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGS---------YIALAIKEQD 237
           ++PG+   +++S+S          M+     V  LP G+ S         Y  + + ++ 
Sbjct: 190 ALPGIFTGVILSVSRALGETAPLIMVGAATYVSKLPEGLNSIFTALPLQIYYWMGLPKEQ 249

Query: 238 LLAILYAMLTMLGVIFL 254
              +  A + +L  I L
Sbjct: 250 FKDLAAAGIIVLLAILL 266



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 11/200 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIA 397
           V + + +    V+  +   I  + + Y+  +F             I   ++  V +I++ 
Sbjct: 17  VIFCVTLIGIVVLVILLADIIMRGVPYLTKNFFTSFPSRFPKKAGILPGIYGSVYIILLT 76

Query: 398 SIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNP 448
            +  +P+G+               +  I+     L+  P+ V+    L V   +      
Sbjct: 77  ILFAVPIGLGTAVYLEEYAKNNRFTKFIKINISNLSGTPSIVYGLLGLTVFVKTLGLGKS 136

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +L M       ++ +      A P   +  + +   T W+  R I++P   P   T
Sbjct: 137 IVAGALTMSLVVLPIVIVSSQEAIKAVPQYLRHGSYALGATKWQTIRKIVIPTALPGIFT 196

Query: 509 GAITACGGAWNASIVSEVAS 528
           G I +   A   +    +  
Sbjct: 197 GVILSVSRALGETAPLIMVG 216


>gi|89099175|ref|ZP_01172053.1| phosphate ABC transporter, permease protein, putative [Bacillus sp.
           NRRL B-14911]
 gi|89086021|gb|EAR65144.1| phosphate ABC transporter, permease protein, putative [Bacillus sp.
           NRRL B-14911]
          Length = 292

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   M     +SLL     A      AK  +    +   +  +  +P + F    +  F+
Sbjct: 78  TIWLMGVVAPVSLLLGVGTAIYLEEYAKKNKFTDFIQVNISNLAGVPSIVFGLLGLTVFV 137

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + +AA   +    +  +  +  +++ ++P++L E S     + WQ    + 
Sbjct: 138 RAAGFGT--SVIAAGLTMSLLVLPIIIVASQEAIRSVPKELREASYGMGATKWQTIVRVV 195

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++++S  
Sbjct: 196 MPAAVPGILTGGILALSRA 214



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 5/149 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPA 430
            ++  V      T++ + V+  ++ ++ +   I++      +            LA  P+
Sbjct: 66  PELAGVKTALIGTIWLMGVVAPVSLLLGVGTAIYLEEYAKKNKFTDFIQVNISNLAGVPS 125

Query: 431 NVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            VF    L V   +       +   L M       I+        + P + +E +     
Sbjct: 126 IVFGLLGLTVFVRAAGFGTSVIAAGLTMSLLVLPIIIVASQEAIRSVPKELREASYGMGA 185

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGA 517
           T W+    +++P   P  +TG I A   A
Sbjct: 186 TKWQTIVRVVMPAAVPGILTGGILALSRA 214


>gi|145637743|ref|ZP_01793394.1| probable D-methionine transport system permease protein
           [Haemophilus influenzae PittHH]
 gi|148825516|ref|YP_001290269.1| ATP-dependent helicase HepA [Haemophilus influenzae PittEE]
 gi|229847521|ref|ZP_04467616.1| ATP-dependent helicase HepA [Haemophilus influenzae 7P49H1]
 gi|145269041|gb|EDK08993.1| probable D-methionine transport system permease protein
           [Haemophilus influenzae PittHH]
 gi|148715676|gb|ABQ97886.1| ATP-dependent helicase HepA [Haemophilus influenzae PittEE]
 gi|229809584|gb|EEP45312.1| ATP-dependent helicase HepA [Haemophilus influenzae 7P49H1]
 gi|309972653|gb|ADO95854.1| DL-methionine transporter, permease protein MetI [Haemophilus
           influenzae R2846]
          Length = 229

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 18/220 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
           +       T Q    V      T++      ++A ++ +PVG+W        I       
Sbjct: 6   LATFSQQLTPQMWGVVATATYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTH 65

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             +     +  + P  +   +++         +       + +      ++         
Sbjct: 66  FVLNTIINIGRSIPFIILLLILLPVTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALM 125

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             PN   E A +   T W+  R   LP   P  + G           S ++     G + 
Sbjct: 126 EIPNGLTEAAQAMGATKWQIVRKFYLPEALPTLINGITLTLVTLVGYSAMAGTQGGGGLG 185

Query: 534 LRTTGLGAYIAESTEKGSFPEV-VLGVLIMCCFVLALNRF 572
                 G Y        + P V  +  +I+  FV+   + 
Sbjct: 186 SLAINYGVY-------RNMPYVTWVATIIIVLFVMISQKL 218



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T     ++ ++++L                  ++ R   VL  I++I +SIP +  L
Sbjct: 25  TYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTHFVLNTIINIGRSIPFIILL 84

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +   +  +    +    AAI  +    +  +      +L  IP  L E +++   + 
Sbjct: 85  LILLP--VTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALMEIPNGLTEAAQAMGATK 142

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P ++P L+  + +++
Sbjct: 143 WQIVRKFYLPEALPTLINGITLTL 166


>gi|329121390|ref|ZP_08250015.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|327469680|gb|EGF15147.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 309

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/183 (10%), Positives = 66/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++     I ++   L           +     ++     +      T   ++ ++ +S+ 
Sbjct: 34  IIKIFTGITVVVFALFLANVLYNGIKVFSPEILSFTEKGIGNQLFNTIYLLVLSLFVSVP 93

Query: 82  FTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                    +    S ++  +L   ++ + S+P +    F    F+     +      A 
Sbjct: 94  IGIFSGIYMSEYVTSGKISSILKMAVETLSSLPSIVVGLFGYFAFVTYVGTQWNLLSGAL 153

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             +IFT  +  +T + Y +   +P + ++ S +   + ++    + +P +   ++  +++
Sbjct: 154 TVSIFTIPL--ITATTYDACKEVPDNYKQGSFALGATRFETIRKVILPAASTRIMTGVIL 211

Query: 199 SMS 201
           +  
Sbjct: 212 ASG 214



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 10/197 (5%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391
               +N+  + ++ IF    V   A+ +A   +   +  F+ + + +        +F  +
Sbjct: 23  RNRITNRVATSIIKIFTGITVVVFALFLA-NVLYNGIKVFSPEILSFTEKGIGNQLFNTI 81

Query: 392 VLIIIASIIWIPVGIWIG-------FRPHISSKIQPFAQLLAAFPANV--FFPLVVSCVS 442
            L++++  + +P+GI+ G           ISS ++   + L++ P+ V   F        
Sbjct: 82  YLLVLSLFVSVPIGIFSGIYMSEYVTSGKISSILKMAVETLSSLPSIVVGLFGYFAFVTY 141

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  L  +L +   T   I           P+++K+ + +   T +   R +ILP  
Sbjct: 142 VGTQWNLLSGALTVSIFTIPLITATTYDACKEVPDNYKQGSFALGATRFETIRKVILPAA 201

Query: 503 FPYYVTGAITACGGAWN 519
               +TG I A G  + 
Sbjct: 202 STRIMTGVILASGRVFG 218


>gi|327459046|gb|EGF05394.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 236

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 79/210 (37%), Gaps = 17/210 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQS 109
             +L      T    L +     +   +               +R +  +L  I+++ +S
Sbjct: 25  WENLIVAIQETLYMTLVSTFYVFVIGLILGLFLYLTGPKKVLANRFVNFLLAGIINVFRS 84

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++ F     G +IG E  AI  +  S        +  +L  IP  + E +
Sbjct: 85  IP-FIILLVLLIPFTRSIMGTIIGPE-GAIPTLVISAAPFYARLVSIALNEIPSGVIEAA 142

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            S   + +Q  W + +P S+P LV  + ++       +V S  I     VI   G+G+  
Sbjct: 143 ESMGANTFQVIWKVLIPESLPALVSGITVTA----IALVGSTAIAG---VIGAGGLGNLA 195

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +++  +++     + ++    Q+L
Sbjct: 196 YQVGFTRNMQDVIFVSTVCILILVFIIQIL 225



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++  +V      +I + +G+++             ++  +     +  + P  +   L+
Sbjct: 35  TLYMTLVSTFYVFVIGLILGLFLYLTGPKKVLANRFVNFLLAGIINVFRSIPFIILLVLL 94

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    + P   +  L+I    +Y    V    +  P+   E A S     ++  
Sbjct: 95  IPFTRSIMGTIIGPEGAIPTLVISAAPFYARL-VSIALNEIPSGVIEAAESMGANTFQVI 153

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +++P   P  V+G          ++ ++ V   G       GLG    +     +  +
Sbjct: 154 WKVLIPESLPALVSGITVTAIALVGSTAIAGVIGAG-------GLGNLAYQVGFTRNMQD 206

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+    +    ++ + + L
Sbjct: 207 VIFVSTVCILILVFIIQIL 225


>gi|325970374|ref|YP_004246565.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025612|gb|ADY12371.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 271

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 86/207 (41%), Gaps = 7/207 (3%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            +  QY   + +    ++  SLL     A   A+ +     L   + + + +P + FL  
Sbjct: 63  QNFLQYMQNSLIVSTVSVFFSLLLGLPAAYSIARYK--QKKLSIFILVARLMPGISFLMP 120

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             + F  L   +++ + +A I +     +  + + M     ++PR+LEE +    L+   
Sbjct: 121 WYIVFSRL---RLMDSYVALILSHMLIALPLVVWVMSPYFDSVPRELEEAAMVDGLTQQA 177

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
            F  + +P S PG+V    +S    W   + S+++        LP I  Y  L+  E D 
Sbjct: 178 AFVKILLPLSGPGVVTATTLSFIFSWNNFMFSQVLSQ-QKTRTLP-IAVYNFLSYVEVDW 235

Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIV 265
            A++ A +T++    +      + ++ 
Sbjct: 236 GAVMAAAVTIMAPAIILTMFFQKYVVK 262


>gi|323187860|gb|EFZ73156.1| inner membrane ABC transporter permease protein yehW [Escherichia
           coli RN587/1]
          Length = 240

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           + L   +  ++  +       +  +               L     + V +  + A II 
Sbjct: 6   FWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIG 65

Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
              GI +       ++ +P  + +AA    FP      + V  + +      + L L  +
Sbjct: 66  TGAGIAV--TRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIALILYGV 123

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                 +L   +AG  A      EVA    ++  +  R + LP      + G  T+    
Sbjct: 124 L----PVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAALVILAGVRTSVIIN 179

Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
              + ++         +    LG  I       +   V+ G L++    +  +R     +
Sbjct: 180 IGTATIA-------STVGANTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 232

Query: 578 YLYGT 582
             +  
Sbjct: 233 QAFSQ 237



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 17/206 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVY 122
           A      +  + + +++          +        ++  I  + Q+ P +  L   V  
Sbjct: 47  ALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPV 106

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
                          AI A+    V  +  +    L  I   + EV++   +S  Q+   
Sbjct: 107 IGFGL--------KPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRK 158

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           + +P +   ++  +  S+         +  +           +G+ I + +   +   ++
Sbjct: 159 VELPLAALVILAGVRTSVIINIGTATIASTVGANT-------LGTPIIIGLSGFNTAYVI 211

Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSN 268
              L +     + D+L  R +  +S 
Sbjct: 212 QGALLVALAAIIADRLFERLVQAFSQ 237


>gi|313813422|gb|EFS51136.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL025PA1]
          Length = 301

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 8/190 (4%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTFTVV 121
           L  L     + + T     LAA S        RR G++ + ++ +   +  +  +   + 
Sbjct: 89  LNTLIIAAATAVLTVFLGALAAYSFSRMRFKGRRGGLLALMLVQMFPQLLTVVAIFLLLT 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  ++YP   IG+ LA I       +   T+ MY     +P+ L+E +R       + F+
Sbjct: 149 WIGDVYPVLGIGSRLALIMVYLGGALGANTYLMYGFFNTVPQSLDEAARVDGAGHARIFF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P + P L    ++S  G +   V + +I+  D       IG Y  ++ +      +
Sbjct: 209 TLILPLAAPILAVVGLLSFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGV 268

Query: 242 LYAMLTMLGV 251
             A   +  +
Sbjct: 269 FAAGAVLAAL 278


>gi|308234018|ref|ZP_07664755.1| phosphate transport system permease protein [Atopobium vaginae DSM
           15829]
 gi|328944487|ref|ZP_08241949.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
 gi|327491071|gb|EGF22848.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
          Length = 324

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +++ + I++      A      A +++L  V+    D++  IP + F  F +++F 
Sbjct: 103 TLIIVVATLAIAIPIGVGGAIYLQEYATNKKLVRVIDFATDVLAGIPSIIFGLFGMLFFG 162

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            +          A   A+    +  +T +  ++L  +P+  +  +       W     + 
Sbjct: 163 QVLRLGYSLLCGALTLALMVLPL--ITRNTQEALTCVPQGYKLGAFGLGAGKWHTIRTIL 220

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P + P +V  +++++ 
Sbjct: 221 LPVAAPSIVTGVILALG 237



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 61/185 (32%), Gaps = 10/185 (5%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIV---NHFTYQDVLYVIWLGCITMFRVVVLIII 396
           +S  L +     + G  +   W ++       +    +  + V      T+  VV  + I
Sbjct: 54  ISAALIVLLLVGIIGYVLAQGWPALNLEFFTCSTSLRKGTIGVAGNIINTLIIVVATLAI 113

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL- 452
           A  I +   I++        +   I     +LA  P+ + F L         L     L 
Sbjct: 114 AIPIGVGGAIYLQEYATNKKLVRVIDFATDVLAGIPSII-FGLFGMLFFGQVLRLGYSLL 172

Query: 453 --SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +       I  N     +  P  +K  A       W   R I+LP   P  VTG 
Sbjct: 173 CGALTLALMVLPLITRNTQEALTCVPQGYKLGAFGLGAGKWHTIRTILLPVAAPSIVTGV 232

Query: 511 ITACG 515
           I A G
Sbjct: 233 ILALG 237


>gi|149182007|ref|ZP_01860493.1| phosphate ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850272|gb|EDL64436.1| phosphate ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 294

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 72/185 (38%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V+++ +I  ++           +   + +  +   +      T   ML    +++ 
Sbjct: 32  LFGLVVLVTLIYRVVSDSIGWIDMGFLSGKLSVNPEKAGILGAILGTVWLMLVVAPVTMF 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK  +L  ++   +  +  +P + F    +  F+ +     I   LA 
Sbjct: 92  LGVGTAIYLEEYAKEGKLKSIIQTNISNLAGVPSVVFGILGLTVFVRMADLGNI--VLAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L ++P+ L E S     + WQ    + +P ++PG++  +++
Sbjct: 150 GLTMSLLVLPIVVVASQEALRSVPQFLREASYGMGATKWQTVKNIVLPTAIPGILTGVIL 209

Query: 199 SMSGG 203
           ++S  
Sbjct: 210 ALSRA 214



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 24/254 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIG------IAWQSIGYIVNHFTY-QDVLYVIWLGCITMFRV 390
            +  ++  I +  VV    I       I W  +G++    +   +   ++     T++ +
Sbjct: 23  AKTIFLFSILFGLVVLVTLIYRVVSDSIGWIDMGFLSGKLSVNPEKAGILGAILGTVWLM 82

Query: 391 VVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +V+  +   + +   I++        + S IQ     LA  P+ VF  L ++        
Sbjct: 83  LVVAPVTMFLGVGTAIYLEEYAKEGKLKSIIQTNISNLAGVPSVVFGILGLTVFVRMADL 142

Query: 448 PNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N+ L+  L M       ++        + P   +E +     T W+  + I+LP   P 
Sbjct: 143 GNIVLAGGLTMSLLVLPIVVVASQEALRSVPQFLREASYGMGATKWQTVKNIVLPTAIPG 202

Query: 506 YVTGAITACGGAWN------------ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            +TG I A   A                I      +    +    +  +  +S     + 
Sbjct: 203 ILTGVILALSRAIGETAPLVVIGIPALLIPLPDGVFDKFTVMPMQIYYWTVDSALTDEYA 262

Query: 554 EVVLGVLIMCCFVL 567
            +    +++   VL
Sbjct: 263 YLAAATIVVLLVVL 276


>gi|90418938|ref|ZP_01226849.1| permease protein, ABC-type phosphate transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337018|gb|EAS50723.1| permease protein, ABC-type phosphate transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 439

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 51/138 (36%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           L  M I L+        A       A   R   ++   ++ + ++P + F    +  F+N
Sbjct: 225 LYMMGIVLVLALPIGVAASIYLEEFAPKNRFTDLIEVNINNLAAVPSIVFGLLGLAVFIN 284

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G    A L     +    +  +  +   +L  +P  +   +     S  Q  +   +
Sbjct: 285 WF-GLPRSAALVGGLVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQMVFQHVL 343

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P +MPG++   ++ ++  
Sbjct: 344 PLAMPGILTGTIIGLAQA 361



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           + ++ I  ++ +P+G+               +  I+     LAA P+ VF  L ++    
Sbjct: 225 LYMMGIVLVLALPIGVAASIYLEEFAPKNRFTDLIEVNINNLAAVPSIVFGLLGLAVFIN 284

Query: 444 YHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P        L++   T   I+    A   A P   +  A     +  +     +LP
Sbjct: 285 WFGLPRSAALVGGLVLTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQMVFQHVLP 344

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG I     A
Sbjct: 345 LAMPGILTGTIIGLAQA 361


>gi|313891381|ref|ZP_07824997.1| phosphate ABC transporter, permease protein PstC [Dialister
           microaerophilus UPII 345-E]
 gi|313120156|gb|EFR43332.1| phosphate ABC transporter, permease protein PstC [Dialister
           microaerophilus UPII 345-E]
          Length = 292

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 71/194 (36%), Gaps = 14/194 (7%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKV 131
           MV                +     + P++ I   IP + +    LT  V +  +++    
Sbjct: 85  MVAPFSIATALYISVTDKKNGEKYIKPMIGIFAGIPSVVYGWTALTVLVPFIRDIFNLPT 144

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               LAA   +       +T  +  +  N+P    E +     + WQ  + + +P +  G
Sbjct: 145 GQTVLAASIVLAMMIFPTVTAVIADAFKNVPPKYIEGAYGLGATRWQMIYSILIPSASSG 204

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP----------LPGIGSYIALAIKEQDLLAI 241
           +V   ++ ++  +   +A  M++    +IP             I S +  A    +L   
Sbjct: 205 IVTGFVLGLTRAFGEALAVSMVIGKMRIIPDSILSPAVNLTTAIASDMGGATAGGELSYA 264

Query: 242 LYAMLTMLGVIFLY 255
           L++M  +L  I ++
Sbjct: 265 LWSMALLLFCISMF 278



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 8/160 (5%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF---- 433
            V   G + +    VL++    I   + I +  + +    I+P   + A  P+ V+    
Sbjct: 69  SVFITGSVAVCLASVLMVAPFSIATALYISVTDKKNGEKYIKPMIGIFAGIPSVVYGWTA 128

Query: 434 ----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P +    +       L  S+++       +   +       P  + E A     T
Sbjct: 129 LTVLVPFIRDIFNLPTGQTVLAASIVLAMMIFPTVTAVIADAFKNVPPKYIEGAYGLGAT 188

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            W+    I++P      VTG +     A+  ++   +   
Sbjct: 189 RWQMIYSILIPSASSGIVTGFVLGLTRAFGEALAVSMVIG 228


>gi|300172955|ref|YP_003772121.1| phosphate ABC transporter permease PstA [Leuconostoc gasicomitatum
           LMG 18811]
 gi|299887334|emb|CBL91302.1| phosphate ABC transporter, permease protein PstA [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 294

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 71/182 (39%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++I ++  +L           +            +      +   ++ AM+IS   
Sbjct: 20  IVALILIAMLAFILIRGVPNLSWHFLTSPARAFEAGGGIGIQLFNSFYLLILAMLISFPI 79

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      +K  R   V+   ++I+ S+P +    F  + F+  +      + L+  
Sbjct: 80  ALGAAIYLNEYSKKGRFTTVVRTAIEILSSLPSVVVGLFGFLIFVVQF--HFGFSILSGA 137

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            A+    +  +T S+  SL  IP    E   +  LS W+   ++ +P ++P +V  +++S
Sbjct: 138 IALTFFNLPLLTRSIETSLAQIPNLQREAGSALGLSRWETVIHIILPAAVPSIVTGVVLS 197

Query: 200 MS 201
             
Sbjct: 198 AG 199



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCI 385
           +   S  +++  +      +V  + I +    +   V + ++                 I
Sbjct: 1   MNAKSADKIATAVIYMIAGIVALILIAMLAFILIRGVPNLSWHFLTSPARAFEAGGGIGI 60

Query: 386 TMFRVVVLIIIASIIWIP--VGIWIGFRP-----HISSKIQPFAQLLAAFPANV--FFPL 436
            +F    L+I+A +I  P  +G  I           ++ ++   ++L++ P+ V   F  
Sbjct: 61  QLFNSFYLLILAMLISFPIALGAAIYLNEYSKKGRFTTVVRTAIEILSSLPSVVVGLFGF 120

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           ++  V ++     L  ++ + F     +  ++    +  PN  +E  S+  ++ W    +
Sbjct: 121 LIFVVQFHFGFSILSGAIALTFFNLPLLTRSIETSLAQIPNLQREAGSALGLSRWETVIH 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           IILP   P  VTG + + G  + 
Sbjct: 181 IILPAAVPSIVTGVVLSAGRVFG 203


>gi|302531460|ref|ZP_07283802.1| ABC quaternary amine transporter [Streptomyces sp. AA4]
 gi|302440355|gb|EFL12171.1| ABC quaternary amine transporter [Streptomyces sp. AA4]
          Length = 215

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 15/199 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              ++    +    VV   I+A+I+ + +GI +   P  S+     A  +   P+     
Sbjct: 11  WGRLLLQAWLHTSMVVQCTILAAILGVLIGIAVYRSPIGSAVATALASTILTVPSFALLG 70

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++           + L L  +      I+ N I G  A      + A    ++      
Sbjct: 71  LLIPLSGLGSTTAVIALVLYGLL----PIVRNTIVGLDAVDPAITDAARGIGMSRLSVLT 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGS 551
            + L   +P  +TG   A       ++++  A          GLGA +      +    S
Sbjct: 127 RVELRLAWPAILTGMRVATQMLMGIAVIAAYAKG-------PGLGAEVFSGLTNAGSTNS 179

Query: 552 FPEVVLGVLIMCCFVLALN 570
             + + G + +    L L+
Sbjct: 180 LNQALTGTVGVVILALVLD 198



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 15/206 (7%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L   A   T  ++   +++ +   +      +S     V   +   + ++P  
Sbjct: 7   ISDRWGRLLLQAWLHTSMVVQCTILAAILGVLIGIAVYRSPIGSAVATALASTILTVPSF 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L         L P   +G+  A I  +    +  +  +    L  +   + + +R   
Sbjct: 67  ALL-------GLLIPLSGLGSTTAVIALVLYGLL-PIVRNTIVGLDAVDPAITDAARGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S       + +  + P ++  M ++             I V       PG+G+ +   +
Sbjct: 119 MSRLSVLTRVELRLAWPAILTGMRVATQMLM-------GIAVIAAYAKGPGLGAEVFSGL 171

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLL 259
                   L   LT    + +   +L
Sbjct: 172 TNAGSTNSLNQALTGTVGVVILALVL 197


>gi|256851567|ref|ZP_05556956.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           27-2-CHN]
 gi|260660990|ref|ZP_05861905.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           115-3-CHN]
 gi|256616629|gb|EEU21817.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           27-2-CHN]
 gi|260548712|gb|EEX24687.1| phosphate ABC transporter, permease PstC [Lactobacillus jensenii
           115-3-CHN]
          Length = 300

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 6/169 (3%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSI 110
           P      +LP     + +  L A +I+  F  + A        +  G +L PI++++  +
Sbjct: 71  PSHNSFGALP-MIVTSFVVTLLAGIIAAPFALIIALAINEIFPKWFGKILQPIIELLVGV 129

Query: 111 PILGFL---TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
           P + +       +   +  + G      LAA+  +F   +  M   M  SL   P++   
Sbjct: 130 PSVVYGFAGLILITPVLRGFFGGSGFGILAAVVVLFMMILPTMVSMMVDSLRATPKNFRT 189

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            S     + WQ    + +P +  GL+  ++  M+  +   +A +M++  
Sbjct: 190 ASYDLGATRWQTLHMVVIPSAKGGLLTAIIFGMTRAFGEALAVQMVIGN 238



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF----FPLVVSC 440
            V+ ++A II  P  + I               +QP  +LL   P+ V+      L+   
Sbjct: 86  FVVTLLAGIIAAPFALIIALAINEIFPKWFGKILQPIIELLVGVPSVVYGFAGLILITPV 145

Query: 441 V--SYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
           +   +      +  +++++F      +   ++    A P +F+  +     T W+    +
Sbjct: 146 LRGFFGGSGFGILAAVVVLFMMILPTMVSMMVDSLRATPKNFRTASYDLGATRWQTLHMV 205

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++P      +T  I     A+  ++  ++       +   
Sbjct: 206 VIPSAKGGLLTAIIFGMTRAFGEALAVQMVIGNAALMPKN 245


>gi|86356138|ref|YP_468030.1| proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86280240|gb|ABC89303.1| probable proline/glycine betaine ABC transporter, permease protein
           [Rhizobium etli CFN 42]
          Length = 249

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 68/209 (32%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P     +SL   A      ++ ++  S +   +      +        +   I +  Q+ 
Sbjct: 40  PAVYTQNSLASLALGHLQLVIGSIACSAVLAVLGGIFVTRKSGADFLPLSRAIANAGQTF 99

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V               +  + A+F   +  +  +    L  +   + + + 
Sbjct: 100 PPVAVLALAVPA--------TGFGAMPTLIALFLYGLLPIFENTVAGLKQVSPQVLDAAD 151

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++  Q+ + + +P ++P ++  + ++        V +       + +   G+G  I 
Sbjct: 152 GMGMNATQRLFRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVII 204

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   +   IL   L +  +  L    +
Sbjct: 205 AGLISDNTAFILQGGLIVGLMAVLIYDAM 233



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 17/196 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANVF 433
            +  L    +  V+  I  ++++ +  GI++       +   P ++ +A     FP    
Sbjct: 47  SLASLALGHLQLVIGSIACSAVLAVLGGIFV--TRKSGADFLPLSRAIANAGQTFPPVAV 104

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L V    +  +   + L L  +      I  N +AG         + A    +   + 
Sbjct: 105 LALAVPATGFGAMPTLIALFLYGLL----PIFENTVAGLKQVSPQVLDAADGMGMNATQR 160

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G   A       ++++   +     +   GLG  I       +  
Sbjct: 161 LFRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVIIAGLISDNTA 213

Query: 554 EVVLGVLIMCCFVLAL 569
            ++ G LI+    + +
Sbjct: 214 FILQGGLIVGLMAVLI 229


>gi|88800387|ref|ZP_01115952.1| polyamine ABC transporter, permease protein [Reinekea sp. MED297]
 gi|88776834|gb|EAR08044.1| polyamine ABC transporter, permease protein [Reinekea sp. MED297]
          Length = 516

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 3/127 (2%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           +   I A+    +  M   MY  +  IP      ++S   + W  FW +  P S+PG+  
Sbjct: 383 QTGTIIAMTHILLPFMILPMYSVMRTIPPSYVRAAKSLGATNWTAFWRVYFPQSVPGIGA 442

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253
             ++       + +   ++   + +     I  +I+ ++    L + L  +L +  VI  
Sbjct: 443 GSILVFIMAIGYYITPAIVGGTEGIFISNRIAYHISSSLNWG-LASALGGILLLAVVILY 501

Query: 254 -LYDQLL 259
            LYD+ +
Sbjct: 502 WLYDKFV 508



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 48/145 (33%), Gaps = 3/145 (2%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +     P  +   A S   T 
Sbjct: 365 LVWVGLVDDANRLVMMNNQTGTIIAMTHILLPFMILPMYSVMRTIPPSYVRAAKSLGATN 424

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I   +         +  +  +I+ S   G
Sbjct: 425 WTAFWRVYFPQSVPGIGAGSILVFIMAIGYYITPAIVGGTEGIFISNRIAYHISSSLNWG 484

Query: 551 SFPEVVLGVLIMCCFVL--ALNRFL 573
                + G+L++   +L    ++F+
Sbjct: 485 -LASALGGILLLAVVILYWLYDKFV 508


>gi|325693742|gb|EGD35661.1| methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 236

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 79/210 (37%), Gaps = 17/210 (8%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQS 109
             +L      T    L +     +   +               +R +  +L  I+++ +S
Sbjct: 25  WENLIVAIQETLYMTLVSTFYVFVIGLILGLFLYLTGPNKVLANRFVNFLLAGIINVFRS 84

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++ F     G +IG E  AI  +  S        +  +L  IP  + E +
Sbjct: 85  IP-FIILLVLLIPFTRSIMGTIIGPE-GAIPTLVISAAPFYARLVSIALNEIPSGVIEAA 142

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
            S   + +Q  W + +P S+P LV  + ++       +V S  I     VI   G+G+  
Sbjct: 143 ESMGANTFQVIWKVLIPESLPALVSGITVTA----IALVGSTAIAG---VIGAGGLGNLA 195

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
                 +++  +++     + ++    Q+L
Sbjct: 196 YQVGFTRNMQDVIFVSTVCILILVFIIQIL 225



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++  +V      +I + +G+++             ++  +     +  + P  +   L+
Sbjct: 35  TLYMTLVSTFYVFVIGLILGLFLYLTGPNKVLANRFVNFLLAGIINVFRSIPFIILLVLL 94

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    + P   +  L+I    +Y    V    +  P+   E A S     ++  
Sbjct: 95  IPFTRSIMGTIIGPEGAIPTLVISAAPFYARL-VSIALNEIPSGVIEAAESMGANTFQVI 153

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +++P   P  V+G          ++ ++ V   G       GLG    +     +  +
Sbjct: 154 WKVLIPESLPALVSGITVTAIALVGSTAIAGVIGAG-------GLGNLAYQVGFTRNMQD 206

Query: 555 VVLGVLIMCCFVLALNRFL 573
           V+    +    ++ + + L
Sbjct: 207 VIFVSTVCILILVFIIQIL 225


>gi|326774193|ref|ZP_08233475.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces viscosus C505]
 gi|326636332|gb|EGE37236.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces viscosus C505]
          Length = 234

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 74/204 (36%), Gaps = 12/204 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ ++  +     L+ + A++ S +     A LA  +R L  VLV    ++ ++P L   
Sbjct: 7   NLPTIAGHLLAHLLQAVPAIIASFVLAIPIARLARVARPLRAVLVTGSSLLYAVPSLALF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +              L  I A+    +  +  +   +L  +   + + + +  +  
Sbjct: 67  VILPIILATGIRDP-----LNVIVALTLYGLALLVPATADALDAVDARVLDAATAMGMGR 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + F  + +P + P ++  + +         V++  +     V+ +  +G       +  
Sbjct: 122 LRCFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRG 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               I+  ++    +  + D L+ 
Sbjct: 175 ITAEIVTGLVATAALALVLDGLVL 198



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 73/201 (36%), Gaps = 8/201 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  +       + + V  II + ++ IP+         + + +   + LL A P+  
Sbjct: 5   LANLPTIAGHLLAHLLQAVPAIIASFVLAIPIARLARVARPLRAVLVTGSSLLYAVPSLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F ++   ++    +P   +  L ++G    ++        A      + A++  +   R
Sbjct: 65  LFVILPIILATGIRDPLNVIVALTLYGLA-LLVPATADALDAVDARVLDAATAMGMGRLR 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P  +TG           ++ +   +     L    LG    +  ++G  
Sbjct: 124 CFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRGIT 176

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            E+V G++      L L+  +
Sbjct: 177 AEIVTGLVATAALALVLDGLV 197


>gi|303239299|ref|ZP_07325827.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
 gi|302593085|gb|EFL62805.1| binding-protein-dependent transport systems inner membrane
           component [Acetivibrio cellulolyticus CD2]
          Length = 284

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFT 119
           L +Y   + +      +++L+   +     AK +  G  ++ I+ +  Q +P + FL   
Sbjct: 72  LGKYFLNSMIVCSVVTLVALVIATLSGYALAKYKFPGSGVIGIIVLSTQMLPGMMFLLPL 131

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSG 176
            + F+N+               IF    + + FS++       +IP +LEE +R    + 
Sbjct: 132 YMNFVNIQNTTHFKMTETLHGLIFIYSAFYVPFSIWIIRGFFASIPGELEEAARIDGCNK 191

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +  F+ + +P ++PG++   +      W  ++ + ++ V    +   GI ++I       
Sbjct: 192 FSAFYRVMLPLAVPGIIATAVYIFLMAWDELLFAWVLGVQTVPV---GIRNFIGFTQSRY 248

Query: 237 DLLAILYAMLTMLGVIFLY 255
           DLL     ++T+  +I  +
Sbjct: 249 DLLLTAGTVVTLPVLIAFF 267


>gi|303248513|ref|ZP_07334771.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio fructosovorans JJ]
 gi|302490133|gb|EFL50053.1| phosphate ABC transporter, inner membrane subunit PstC
           [Desulfovibrio fructosovorans JJ]
          Length = 297

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 93/268 (34%), Gaps = 27/268 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
            N   L +   +  +  I  +  V G+ I        ++     Y      ++     + 
Sbjct: 13  RNMFFLTALSSIVALALIMIYLFVEGLPIFSVVSVTDFLFGSLWYPTSDPPLFGIFPLIV 72

Query: 389 RVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
             + +  ++S I IP+G+                  +P  +LLAA P+ V        V 
Sbjct: 73  ASLAVTALSSAIAIPLGVMTAIYLAEIASRKTRDIFKPIVELLAALPSVV-IGFFGMVVV 131

Query: 443 YYHLNP--------NLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRW 493
             +L          NL+ + LM+       + +V      + P + KE + +   T +  
Sbjct: 132 APYLQDTFDLATGLNLFNASLMLAFMSVPTICSVSEDAIYSVPRELKEASLALGATHFET 191

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT----------TGLGAYI 543
              ++LP       T  +     A   ++V  + + G   + T          + + A +
Sbjct: 192 IAKVVLPASLSGISTAVMLGMSRAIGETMVVLMVAGGAAIIPTSIFSPVRPMPSSIAAEM 251

Query: 544 AESTEKGSFPEVVLGV-LIMCCFVLALN 570
           AE+  +G+    +  + +++  F L  N
Sbjct: 252 AEAAFRGNHYRALFAIGIVLFLFTLVFN 279



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 20/203 (9%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-- 122
           L+   +S         + A       SR+   +  PI++++ ++P  ++GF    VV   
Sbjct: 75  LAVTALSSAIAIPLGVMTAIYLAEIASRKTRDIFKPIVELLAALPSVVIGFFGMVVVAPY 134

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             + +          A   +    V  +      ++ ++PR+L+E S +   + ++    
Sbjct: 135 LQDTFDLATGLNLFNASLMLAFMSVPTICSVSEDAIYSVPRELKEASLALGATHFETIAK 194

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL----------PGIGSYIALA 232
           + +P S+ G+   +M+ MS      +   M+  G  +IP             I + +A A
Sbjct: 195 VVLPASLSGISTAVMLGMSRAIGETMVVLMVAGGAAIIPTSIFSPVRPMPSSIAAEMAEA 254

Query: 233 IKEQDLLAILYAMLTMLGVIFLY 255
               +    L+A+  +L +  L 
Sbjct: 255 AFRGNHYRALFAIGIVLFLFTLV 277


>gi|302384804|ref|YP_003820626.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           saccharolyticum WM1]
 gi|302195432|gb|ADL03003.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           saccharolyticum WM1]
          Length = 302

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   ++  ++I+  F    A      AK  ++  ++    + +  IP + F  F  V+F 
Sbjct: 86  TLYVVIITLLIATPFGIGAAIYLNEYAKGGKVVRMIEFTTETLSGIPSIIFGLFGYVFFG 145

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       A   +I    +  +T +  ++L  +P      +     + W     + 
Sbjct: 146 ITLGLGYSILTGALTLSIMVLPL--ITRTTQEALKTVPESYRSGALGIGATKWYMIRTIL 203

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +MPG+V  +++++ 
Sbjct: 204 LPSAMPGIVTGIILAIG 220



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 16/275 (5%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-HFT 372
             + R++   +    ++ L +      S  + +    +      GI   S+ ++     T
Sbjct: 13  SAVARSIYNRKNRISDSVLMVLIYLCASISILVLIGIMGYVFVRGIPEISLEFLTTVPST 72

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFP 429
            +    ++     T++ V++ ++IA+   I   I++        +   I+   + L+  P
Sbjct: 73  IKGTFGILGNVVNTLYVVIITLLIATPFGIGAAIYLNEYAKGGKVVRMIEFTTETLSGIP 132

Query: 430 ANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           + +F  F  V   ++       L  +L +       I           P  ++  A    
Sbjct: 133 SIIFGLFGYVFFGITLGLGYSILTGALTLSIMVLPLITRTTQEALKTVPESYRSGALGIG 192

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA------ 541
            T W   R I+LP   P  VTG I A G     S      +     L     G       
Sbjct: 193 ATKWYMIRTILLPSAMPGIVTGIILAIGRIVGESAALLFTAGSGYLLPKDFFGKIFESGG 252

Query: 542 ----YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                +    +K  + +     +++   VLA+N  
Sbjct: 253 TLTIQLYLCMQKAKYGQAFAIAVVLLVIVLAINGL 287


>gi|289422428|ref|ZP_06424271.1| phosphate ABC transporter, permease protein PstA
           [Peptostreptococcus anaerobius 653-L]
 gi|289157000|gb|EFD05622.1| phosphate ABC transporter, permease protein PstA
           [Peptostreptococcus anaerobius 653-L]
          Length = 286

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 75/182 (41%), Gaps = 4/182 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           ++ F ++IGII  +L            +          + +L      T + ++ A+ + 
Sbjct: 32  VMTFAVLIGIIAYILINGLPYINSSIFEFKHTSENASLMPALINTLIMTLISLVIAVPLG 91

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +         A++  +L  ++    + +  IP + +  F +++F++        + +A  
Sbjct: 92  IFAAIFLVEYASRGNKLLGLIRLTTETLSGIPSIVYGLFGLLFFVDTLGWGF--SMIAGA 149

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +    +  +  +  ++L ++P    E S        +  + + +P ++PG++  ++++
Sbjct: 150 FTLAIMILPLIIRTTEEALKSVPNSFREGSFGLGAGKLRTVFKIVLPSAVPGILAGIILA 209

Query: 200 MS 201
           + 
Sbjct: 210 VG 211



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 83/247 (33%), Gaps = 17/247 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +  F V+ G+   I    + YI +                 +   +++ +I+ +I +
Sbjct: 29  LATVMTFAVLIGIIAYILINGLPYINSSIFEFKHTSENASLMPALINTLIMTLISLVIAV 88

Query: 403 PVGIWIG--------FRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWL 452
           P+GI+              +   I+   + L+  P+ V+  F L+    +       +  
Sbjct: 89  PLGIFAAIFLVEYASRGNKLLGLIRLTTETLSGIPSIVYGLFGLLFFVDTLGWGFSMIAG 148

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +  +       I+        + PN F+E +        R    I+LP   P  + G I 
Sbjct: 149 AFTLAIMILPLIIRTTEEALKSVPNSFREGSFGLGAGKLRTVFKIVLPSAVPGILAGIIL 208

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGA-------YIAESTEKGSFPEVVLGVLIMCCF 565
           A G     +      +    ++ ++ +G+           ++E     +     +++   
Sbjct: 209 AVGRIVGETAALMYTAGTAANVPSSIMGSGRTLAVHMYTLASEGLYMNQAYATAVVILVM 268

Query: 566 VLALNRF 572
            + +N  
Sbjct: 269 TVGINTL 275


>gi|282860419|ref|ZP_06269485.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptomyces sp. ACTE]
 gi|282564155|gb|EFB69691.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptomyces sp. ACTE]
          Length = 362

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 98/290 (33%), Gaps = 21/290 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  +   F  +S             +     + + +C    V  +  + W  V  G   
Sbjct: 61  WGLLAALLFLAISYAATTAVENQRQAKDRLATSVVWVCFLAAVVPLASLLWTTVSRGAER 120

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------ 411
              +     +     ++D   V      T+ +V     IA++I  P+G+           
Sbjct: 121 LDGYFLTHSMAGVLGFEDTGGVYHALIGTLEQV----GIATVISAPLGLLTAVYLVEYGK 176

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIA 470
             ++  +  F  ++   P+ V    ++S +    + P+  +  L +      ++  +   
Sbjct: 177 GSLAKAVTFFVDVMTGIPSIVAGLFILSIMLMAKIEPSGLMGALALTILMVPVVVRSTEE 236

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                PN+ +E + +  I  WR    ++LP       TG + A       +    +  +G
Sbjct: 237 MLKLVPNELREASLALGIPKWRTILKVVLPTAIGGITTGVMLAIARIAGETAPIILLVFG 296

Query: 531 HIHLRT-------TGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALN 570
              + T       + L  YI E  + G   S+       L++  FV+ LN
Sbjct: 297 SQLINTNPFSGAQSSLPFYIYEQYKVGEAASYDRAWAAALVLIAFVMILN 346



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 79/213 (37%), Gaps = 20/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           T  ++  A VIS     + A    +  +  L   +   +D+M  IP +  G    +++  
Sbjct: 149 TLEQVGIATVISAPLGLLTAVYLVEYGKGSLAKAVTFFVDVMTGIPSIVAGLFILSIMLM 208

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             + P  ++GA    I  +       +  S  + L  +P +L E S +  +  W+    +
Sbjct: 209 AKIEPSGLMGALALTILMVPV-----VVRSTEEMLKLVPNELREASLALGIPKWRTILKV 263

Query: 184 GVPFSMPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALAI--- 233
            +P ++ G+   +M++++            V  S++I           +  YI       
Sbjct: 264 VLPTAIGGITTGVMLAIARIAGETAPIILLVFGSQLINTNPFSGAQSSLPFYIYEQYKVG 323

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +         A L ++  + + + L  R +  W
Sbjct: 324 EAASYDRAWAAALVLIAFVMILN-LAARGIARW 355


>gi|187933991|ref|YP_001886729.1| ABC transporter permease [Clostridium botulinum B str. Eklund 17B]
 gi|187722144|gb|ACD23365.1| ABC transporter, permease protein [Clostridium botulinum B str.
           Eklund 17B]
          Length = 256

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 15/199 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++R V+  I+A I+ I +G+     P     + P        P  V   LV+       
Sbjct: 62  SVYRSVLCYILAIILAIILGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWF---- 117

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                    ++ F   + IL+  I G  ++      ++   + I+     + I  P I  
Sbjct: 118 --NKDKTPFIVGFAITFPILYEGIVGSLNSIDKKIIDMMDIYEISLIEKIKNIYAPIIKF 175

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
           +  +  ++    A+   I  EV           G+G+ I       +   +   ++++  
Sbjct: 176 HLASIFVSTFSLAFKVVIAGEV-----HGQPRYGIGSAIQLEKVNFNTSGIFAWIVLIAI 230

Query: 565 FVLAL---NRFLWHPLYLY 580
             LA    N      +Y +
Sbjct: 231 LSLAFEFINNLFKTRIYRW 249



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 87/237 (36%), Gaps = 14/237 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F++V  ++ ++++        + ++  +   +           +  R +   +++++
Sbjct: 16  CLFFLIVWQVLAVIINNDIYLPNIQQVITEMSKIISKSDFNLIFISSVYRSVLCYILAII 75

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
              +   L         +L PI    ++IP +  +   +V+F       ++G        
Sbjct: 76  LAIILGVLTFMYPFFKFLLAPINSFAKTIPTMVLVVLVLVWFNKDKTPFIVG-------- 127

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            F      +   +  SL +I + + ++   + +S  +K   +  P     L    + + S
Sbjct: 128 -FAITFPILYEGIVGSLNSIDKKIIDMMDIYEISLIEKIKNIYAPIIKFHLASIFVSTFS 186

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +  V+A E+        P  GIGS I L     +   I   ++ +  +   ++ +
Sbjct: 187 LAFKVVIAGEV-----HGQPRYGIGSAIQLEKVNFNTSGIFAWIVLIAILSLAFEFI 238


>gi|325300706|ref|YP_004260623.1| phosphate ABC transporter, inner membrane subunit PstA [Bacteroides
           salanitronis DSM 18170]
 gi|324320259|gb|ADY38150.1| phosphate ABC transporter, inner membrane subunit PstA [Bacteroides
           salanitronis DSM 18170]
          Length = 294

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   M+ + V S     +        A   ++   +  + + +  IP + F  F + +F+
Sbjct: 75  TFYLMIGSAVFSFPVGVMSGIYMNEYAPKGKMVNFIRTMTNNLAGIPSIVFGLFGMAFFV 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N        + +A    +    +  +  +  ++  +IP    E S +   +  Q  W + 
Sbjct: 135 NYLDFGD--SIIAGSLTLGLLALPIVIRTTEEAFKDIPNSYREGSLALGATKAQTIWKVL 192

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +MP ++  +++S+ 
Sbjct: 193 LPMAMPRIITGLILSLG 209



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--ASI 399
            +L  F   V+  +   I  + I  I   F  Q     +  G I    V    ++  +++
Sbjct: 25  RILSYFIAAVLFYILGFIIVKGISVINWDFLTQAPTDGMTKGGILPAIVGTFYLMIGSAV 84

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G   +  +        +          P+ VF    ++    Y    +  +
Sbjct: 85  FSFPVGVMSGIYMNEYAPKGKMVNFIRTMTNNLAGIPSIVFGLFGMAFFVNYLDFGDSII 144

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +       ++          PN ++E + +   T  +    ++LP   P  +TG 
Sbjct: 145 AGSLTLGLLALPIVIRTTEEAFKDIPNSYREGSLALGATKAQTIWKVLLPMAMPRIITGL 204

Query: 511 ITACG 515
           I + G
Sbjct: 205 ILSLG 209


>gi|320012446|gb|ADW07296.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces flavogriseus ATCC 33331]
          Length = 313

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 83/246 (33%), Gaps = 9/246 (3%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P  + V  L   L  +    P  +L + + +    +LD F      G+     +     
Sbjct: 34  RPRRSTVLTLLMGLTAVYALMPLAWLVINATKTQKSLLDSF------GLWFSGEFALWDN 87

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I    TY D ++V W    T+  VVV    A+ + +  G  +        +      + A
Sbjct: 88  ISQTLTYDDGIFVRWF-LNTLLYVVVGAGGATFLAVLGGYGLAKFDFAGKRAVFATVIGA 146

Query: 427 -AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A PA           S   L    W  ++    + + +    +  A A P +  E A  
Sbjct: 147 VAVPATALAVPTFLMFSKMGLTNTPWAVIIPSLISPFGLYLMWVFAAEAIPTELLEAARV 206

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIA 544
                 R +  + LP + P  VT  +      W N  +   +      +  T GL A+  
Sbjct: 207 DGSGELRTFFQVALPLLTPGIVTVLLFTMVQTWNNYFLPVIMIKNPDWYPLTLGLNAWNQ 266

Query: 545 ESTEKG 550
           +++  G
Sbjct: 267 QASTAG 272



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSI 110
             +T D     ++   T L ++     +     +     AK    G   +   +    ++
Sbjct: 90  QTLTYDDGIFVRWFLNTLLYVVVGAGGATFLAVLGGYGLAKFDFAGKRAVFATVIGAVAV 149

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P       T + F  +           A+        + +      +   IP +L E +R
Sbjct: 150 PATALAVPTFLMFSKMGLTNTP----WAVIIPSLISPFGLYLMWVFAAEAIPTELLEAAR 205

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                  + F+ + +P   PG+V  ++ +M   W 
Sbjct: 206 VDGSGELRTFFQVALPLLTPGIVTVLLFTMVQTWN 240


>gi|255525670|ref|ZP_05392603.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           carboxidivorans P7]
 gi|296185428|ref|ZP_06853838.1| phosphate ABC transporter, permease protein PstA [Clostridium
           carboxidivorans P7]
 gi|255510656|gb|EET86963.1| phosphate ABC transporter, inner membrane subunit PstA [Clostridium
           carboxidivorans P7]
 gi|296050262|gb|EFG89686.1| phosphate ABC transporter, permease protein PstA [Clostridium
           carboxidivorans P7]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +L++ +I  +L+    +  P  +     +      +      +   ++ +++I++ F
Sbjct: 20  FVILLLMALIGYILYKGGNSLNPSFLFGKPKVGEAGGGIGPQLFNSFYMLVVSLIITVPF 79

Query: 83  TFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                   A+  R G +L  I   ++ M S+P +    F ++ F+ +         L+  
Sbjct: 80  GVGAGIYLAEYAREGFLLNIIRLCIETMASLPSIVVGLFGLLVFVGM--TNWGFTLLSGA 137

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            AI    + ++T     ++    + ++E S     + WQ    + +P ++P ++  ++++
Sbjct: 138 LAIAVLNLPSLTRVSENAIVAAGKSVKEASLGLGATKWQTIKKVILPSAIPQILTGVILA 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPLP 223
            SG  F   A+ +   G +   LP
Sbjct: 198 -SGRIFGEAAALLYTAGMSAPVLP 220



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 17/194 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVVVLIIIA 397
           + Y++  F   ++  +   I ++    +   F +    V          +F    +++++
Sbjct: 13  ILYVVSGFVILLLMALIGYILYKGGNSLNPSFLFGKPKVGEAGGGIGPQLFNSFYMLVVS 72

Query: 398 SIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV-----FFPLVVSCVSYYH 445
            II +P G+  G           + + I+   + +A+ P+ V         V      + 
Sbjct: 73  LIITVPFGVGAGIYLAEYAREGFLLNIIRLCIETMASLPSIVVGLFGLLVFVGMTNWGFT 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           L        ++   +   +  N I  A       KE +     T W+  + +ILP   P 
Sbjct: 133 LLSGALAIAVLNLPSLTRVSENAIVAAG---KSVKEASLGLGATKWQTIKKVILPSAIPQ 189

Query: 506 YVTGAITACGGAWN 519
            +TG I A G  + 
Sbjct: 190 ILTGVILASGRIFG 203


>gi|328471111|gb|EGF42015.1| phosphate ABC transporter, permease protein PstA [Listeria
           monocytogenes 220]
          Length = 250

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  M+IS+  +       A   +   +  ++   ++++ S+P +    F  + F+
Sbjct: 21  SFYMLVITMIISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPSIVVGLFGFLVFV 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       A    IF   +  +   + ++L  IP    E   +  LS W+    + 
Sbjct: 81  IQMGWSFSVISGALTLTIFNLPL--LIRVVEEALNAIPNTQREAGLALGLSRWETITRVL 138

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           VP ++P ++  ++++ +G  F   A+ +   G +   L
Sbjct: 139 VPAALPAIITGVILA-AGRVFGEAAALIFTAGQSTPIL 175



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 15/144 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVS 442
           + + +V+ +II+  I +  GI++      +          ++L++ P+     +VV    
Sbjct: 21  SFYMLVITMIISVPISLGAGIYMAEYARKNWITDLIRTTIEVLSSLPS-----IVVGLFG 75

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWR 495
           +      +  S  +I G     +FN       V    +A PN  +E   +  ++ W    
Sbjct: 76  FLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALNAIPNTQREAGLALGLSRWETIT 135

Query: 496 YIILPGIFPYYVTGAITACGGAWN 519
            +++P   P  +TG I A G  + 
Sbjct: 136 RVLVPAALPAIITGVILAAGRVFG 159


>gi|300933045|ref|ZP_07148301.1| glutamate transporter permease protein GluD [Corynebacterium
           resistens DSM 45100]
          Length = 312

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 21/251 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    LV+    +L  GI+     +   +     L       Y        L A V+S++
Sbjct: 23  LTVATLVVTAAVLLWVGIRLNGNGQFEAEKWQPFLTGDMWTTYILPGLWGTLKAAVVSII 82

Query: 82  FTFVYATLAAKSRR-----LGMVLVPILDIMQSIPILGFLTFTVVYFM--NLYPGKVIGA 134
              +  T+    R      +  +   I++  ++IP+L  + F    F    L P K + A
Sbjct: 83  LAIIVGTVLGLGRLSVVAPVRWLCTIIVEFFRAIPVLLLMIFAYQVFAIYGLVPTKHL-A 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MP 190
             A +F +       +   +   +  +P   EE + +  LS  Q  + + +P +    +P
Sbjct: 142 FGAVVFGLTMYNGSVIAEILRSGIRALPAGQEEAAIALGLSRRQTMFKILLPQAVASMLP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+  M++++         +   ++G   +   G+    A +  +  L A++   + M+ 
Sbjct: 202 ALISQMVIALKDS------ALGYLIGYVEVVRSGL---QAASWYKNYLAAMVVVAIIMIL 252

Query: 251 VIFLYDQLLFR 261
           V +L  +L  R
Sbjct: 253 VNYLLSRLAER 263



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 85/269 (31%), Gaps = 27/269 (10%)

Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITM 387
               R   +  +     +   A  + W  I    N     +       G          +
Sbjct: 11  APGPRGIQINRLLTVATLVVTAAVLLWVGIRLNGNGQFEAEKWQPFLTGDMWTTYILPGL 70

Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPH-----ISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           +  +   +++ I+ I VG  +G         +        +   A P  +         +
Sbjct: 71  WGTLKAAVVSIILAIIVGTVLGLGRLSVVAPVRWLCTIIVEFFRAIPVLLLMIFAYQVFA 130

Query: 443 YYHLNPNLWLSL-LMIFGTQWY----ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
            Y L P   L+   ++FG   Y    I   + +G  A P   +E A +  ++  +    I
Sbjct: 131 IYGLVPTKHLAFGAVVFGLTMYNGSVIAEILRSGIRALPAGQEEAAIALGLSRRQTMFKI 190

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           +LP      +   I+    A   S +  +   G++ +  +GL            +   + 
Sbjct: 191 LLPQAVASMLPALISQMVIALKDSALGYLI--GYVEVVRSGL-------QAASWYKNYLA 241

Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            ++++   ++ +N  L   L       LR
Sbjct: 242 AMVVVAIIMILVNYLL-SRLAERMENQLR 269


>gi|262402746|ref|ZP_06079307.1| methionine ABC transporter permease protein [Vibrio sp. RC586]
 gi|262351528|gb|EEZ00661.1| methionine ABC transporter permease protein [Vibrio sp. RC586]
          Length = 225

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A ++          +   +++        L  VL  I++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGMVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 59/191 (30%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  ++   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGMVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAIVNIGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +          I     +     +
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITIM 197

Query: 556 VLGVLIMCCFV 566
            + V+++   V
Sbjct: 198 AVTVVMLIVLV 208


>gi|302521014|ref|ZP_07273356.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
 gi|302429909|gb|EFL01725.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78]
          Length = 259

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451
           + +++A +I +PV +W+G      +     + +  A P      L+       H      
Sbjct: 36  LSMLVACLIALPVALWLGHLGKGGALAVNISNIGRAIPTLALLALLSLTPLREHGETPTL 95

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           ++L++       +L N   G         E A    ++G + +  + LP  FP  +TG  
Sbjct: 96  IALVLF--AIPPVLTNAYIGMREADRAVVEAARGMGMSGGQVFLRVELPLAFPLLMTGIR 153

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           +A       + ++ +   G       GLG  I       +  +
Sbjct: 154 SAAVQTVATATLAAIPGGG-------GLGRVITAGFNLQNTSQ 189



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 10/141 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
           H L ++   T L ML A +I+L        L     + G + V I +I ++I        
Sbjct: 25  HRLIEHLGFTGLSMLVACLIALPVALWLGHLG----KGGALAVNISNIGRAI------PT 74

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             +  +          E   + A+    +  +  + Y  +    R + E +R   +SG Q
Sbjct: 75  LALLALLSLTPLREHGETPTLIALVLFAIPPVLTNAYIGMREADRAVVEAARGMGMSGGQ 134

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
            F  + +P + P L+  +  +
Sbjct: 135 VFLRVELPLAFPLLMTGIRSA 155


>gi|256843978|ref|ZP_05549465.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           125-2-CHN]
 gi|256849460|ref|ZP_05554892.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-1A-US]
 gi|262046129|ref|ZP_06019092.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-3A-US]
 gi|293380950|ref|ZP_06626983.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus 214-1]
 gi|256613883|gb|EEU19085.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           125-2-CHN]
 gi|256713576|gb|EEU28565.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-1A-US]
 gi|260573459|gb|EEX30016.1| phosphate ABC transporter, permease PstA [Lactobacillus crispatus
           MV-3A-US]
 gi|290922481|gb|EFD99450.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           crispatus 214-1]
          Length = 291

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 71/211 (33%), Gaps = 9/211 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +     R+   +      ++    + +    I   +  F +  +           F  + 
Sbjct: 3   RAKIKDRLMTGIFYAIGWIMLAFLLYLMLTIIFDGLKGFQWDFLGAAGNGIFNQFFNTIY 62

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSY 443
           L+ ++ ++ +P+GI  G             +  +   + L++ P+ V   F  +   +  
Sbjct: 63  LVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFIMWT 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L  +L +   +   I         + P ++KE + S   T     R +++P   
Sbjct: 123 GMSWNILAGALTISILSIPLITTETNNAIRSLPVEYKEGSLSLGATKSETIRKVLIPAAM 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           P  +TG I A G  +  +      S    ++
Sbjct: 183 PQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L      ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    LA    I    +  +T     ++ ++P + +E S S   +  +    + 
Sbjct: 120 MW--TGMSWNILAGALTISILSIPLITTETNNAIRSLPVEYKEGSLSLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|239617555|ref|YP_002940877.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
 gi|239506386|gb|ACR79873.1| binding-protein-dependent transport systems inner membrane
           component [Kosmotoga olearia TBF 19.5.1]
          Length = 276

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 3/210 (1%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
             V  L +    + +  LS  ++SL      A   AK R     L  IL I+ S+ +   
Sbjct: 61  FTVQKLGRNLMNSFIVALSTTLVSLAIGASSAYALAKFRMKFKNL--ILSIILSVSMFPG 118

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
           +      ++     K+I    A I    T  +    + +      IP +L E +      
Sbjct: 119 IVVVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTFFRQIPDELVEAAAIDGAR 178

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            +  F  +  P + PG+    +++  G W  ++ +++ V       +P +   +      
Sbjct: 179 PFTTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVP-VALTLFQGQYT 237

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                I  A + +   + +    L R +I 
Sbjct: 238 SSWQLIAAAAVVITLPLIIMVLFLQRWIIA 267



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 63/192 (32%), Gaps = 3/192 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           +    +   +++  I       +        + I      ++ FP  V   PL +     
Sbjct: 73  SFIVALSTTLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIVVVSPLYIMFKEA 132

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +N    L L  +  +    ++ +       P++  E A+      +  +  +I P   
Sbjct: 133 KLINTYWALILPYLTFSLPLTIWILTTFFRQIPDELVEAAAIDGARPFTTFTKVIAPLAA 192

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI    GAWN  + +++            +   + +     S+  +    +++ 
Sbjct: 193 PGVFTAAILTFIGAWNELLFAKIFVTSADKFTVP-VALTLFQGQYTSSWQLIAAAAVVIT 251

Query: 564 CFVLALNRFLWH 575
             ++ +  FL  
Sbjct: 252 LPLIIMVLFLQR 263


>gi|119953013|ref|YP_945222.1| phosphate transport system permease protein PstC [Borrelia
           turicatae 91E135]
 gi|119861784|gb|AAX17552.1| phosphate transport system permease protein PstC [Borrelia
           turicatae 91E135]
          Length = 302

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 10/163 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           A  T   +L A+ I L F      L+ K++      L  I++++  IP + +  F   + 
Sbjct: 82  ALTTFFSVLIALPIGLGFAI---YLSEKTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFI 138

Query: 124 MNLYPGKV-----IGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGW 177
             L          +G  L     + +  +     S+ Y SL  +P+  +  S +   + W
Sbjct: 139 ATLIKNTFSREDNLGYNLITSVIVLSIMILPTIISVSYTSLKAVPKSYKLASLALAATDW 198

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           Q  + + +P +  G++  +++++       +A  M+  G  + 
Sbjct: 199 QTIYKVMIPSAGKGILAGVILAIGRAIGETIAVLMVGGGSPLF 241



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 16/157 (10%)

Query: 391 VVLIIIASIIWIP--VGIWIGFRPH----ISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
            +    + +I +P  +G  I             +Q   +LLA  P+ V+     + ++  
Sbjct: 82  ALTTFFSVLIALPIGLGFAIYLSEKTKGIYQKTLQTIIELLAGIPSVVYGFFGSTFIATL 141

Query: 445 ---------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWW 494
                    +L  NL  S++++       + +V      A P  +K  + +   T W+  
Sbjct: 142 IKNTFSREDNLGYNLITSVIVLSIMILPTIISVSYTSLKAVPKSYKLASLALAATDWQTI 201

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             +++P      + G I A G A   +I   +   G 
Sbjct: 202 YKVMIPSAGKGILAGVILAIGRAIGETIAVLMVGGGS 238


>gi|292654025|ref|YP_003533923.1| ABC-type transport system permease protein (probable substrate
           phosphate) [Haloferax volcanii DS2]
 gi|291369512|gb|ADE01740.1| ABC-type transport system permease protein (probable substrate
           phosphate) [Haloferax volcanii DS2]
          Length = 540

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 81/200 (40%), Gaps = 6/200 (3%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64
           +L  F   +  P +F  LAF    G  + ++            +++ V +  DV+ +   
Sbjct: 234 LLVAFTVLKGLPGLFKGLAFGAGAGPEVTLVGVTFSLPVSWPFVMNGVALLNDVNGVLPA 293

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T   ++ A++ ++      A      A   R   V+    + + S P + F  F + 
Sbjct: 294 IVGTIWLVVGAVLFAVPLGIGAAVFITEYADRGRFTQVVEIATNGLWSTPSIVFGLFGLT 353

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           + +     +   + LA +  +    +  +  +  +S+  +P +  + S +  ++ WQ   
Sbjct: 354 FLVPRLGNQ--KSLLAGMLTLGFMLLPLVVITSRESMLAVPDEYRDASAALGVTKWQTVR 411

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            + +P ++PG+V  +++ + 
Sbjct: 412 SIVLPAALPGIVTGIILGVG 431



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFP 429
             DV  V+     T++ VV  ++ A  + I   ++I     R   +  ++     L + P
Sbjct: 284 LNDVNGVLPAIVGTIWLVVGAVLFAVPLGIGAAVFITEYADRGRFTQVVEIATNGLWSTP 343

Query: 430 ANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           + VF  F L        +    L   L + F     ++        A P+++++ +++  
Sbjct: 344 SIVFGLFGLTFLVPRLGNQKSLLAGMLTLGFMLLPLVVITSRESMLAVPDEYRDASAALG 403

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACG 515
           +T W+  R I+LP   P  VTG I   G
Sbjct: 404 VTKWQTVRSIVLPAALPGIVTGIILGVG 431


>gi|221639013|ref|YP_002525275.1| phosphate ABC transporter inner membrane subunit PstA [Rhodobacter
           sphaeroides KD131]
 gi|221159794|gb|ACM00774.1| Phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sphaeroides KD131]
          Length = 449

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 6/158 (3%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILD 105
           D   +  +   L      +   M+  +V++L      +      A K+R   ++ V I +
Sbjct: 212 DASEVRPEAAGLGVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIAN 271

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            + ++P + F    +  F+N+         +  +       +  +  +   SL  +P  +
Sbjct: 272 -LAAVPSIVFGILGLAIFINMMGLPQSAPIVGGLILTL-MTLPTIIIATRVSLAAVPPSI 329

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +     S  Q  ++  +P ++PG++   ++ M+  
Sbjct: 330 RDAALGVGASRMQAVFHHVLPLALPGILTGTIIGMARA 367



 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     ++II  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVAILGSAYMMIIVLVLALPIGVAASIYLEEFAPKNRWTDLIEVNIANLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++        P        L++   T   I+       +A P   ++ A     +  + 
Sbjct: 284 GLAIFINMMGLPQSAPIVGGLILTLMTLPTIIIATRVSLAAVPPSIRDAALGVGASRMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 VFHHVLPLALPGILTGTIIGMARA 367


>gi|111019581|ref|YP_702553.1| ABC quaternary amine transporter, permease component [Rhodococcus
           jostii RHA1]
 gi|110819111|gb|ABG94395.1| ABC quaternary amine transporter, permease component [Rhodococcus
           jostii RHA1]
          Length = 216

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 69/179 (38%), Gaps = 12/179 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               L  L  +V+ ++       LA +SRR+   +V    ++ +IP L          + 
Sbjct: 18  GWHILLSLVPLVVGVIVALPIGWLAHRSRRINPYVVGTAGLLYTIPSLALF-----VLLP 72

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
              G  I   +  + A+    V  +   +  +L ++P++    + +     +Q    + +
Sbjct: 73  PILGTKILDPMNIVVALTIYTVALLVRVIADALDSVPQETVLAATAMGYRPYQTLLKVQL 132

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           P  +P +   + ++       VV++  +V    ++ +P IGS      + +    I+  
Sbjct: 133 PVGVPVICAGLRVA-------VVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIITG 184



 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V +++  I+ +P+G        I+  +   A LL   P+   F L+   +    L+P  
Sbjct: 25  LVPLVVGVIVALPIGWLAHRSRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKILDPMN 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L I+     +   +     + P +    A++     ++    + LP   P    G 
Sbjct: 85  IVVALTIYTVALLVRV-IADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVICAGL 143

Query: 511 ITACGGAWNASIVSEVASWGHI 532
             A     +   ++ +     I
Sbjct: 144 RVAVVSNVSLVSLAALLGIPQI 165


>gi|150016812|ref|YP_001309066.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
 gi|149903277|gb|ABR34110.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium beijerinckii NCIMB 8052]
          Length = 255

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 93/238 (39%), Gaps = 14/238 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           ++P  F +L  +     I     G +   +P     I  ++ +          T    L 
Sbjct: 9   LWPLGFGILIIIAWQVGIIHDALGFKPFQLPVPSQIIKTLSDNFSKALTDTMITVSGALV 68

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            + +  +  F+ A +A +  + G   + ++    +IPI+        +F + +  KV   
Sbjct: 69  GLALGCIIGFIVAVIATQFPKWGYTGLSVIAAFNAIPIVALSPIMNRWFTSGFAQKVGVV 128

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +  + A        M  + Y+ L ++    +++  S+       F+ L +P  +P ++ 
Sbjct: 129 TVVCMAA--------MAINSYRGLNDLKPFAKDLLESYAAPEKIIFFKLRLPNCLPSVLT 180

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
            + ++++      + SE      +     GIG  I   +++  ++A+ ++ + M  ++
Sbjct: 181 ALKINVAAAIMAAMISEYFAASTS-----GIGFGIKDNLRKG-MMAMGWSYIVMAALV 232



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 75/240 (31%), Gaps = 12/240 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCIT 386
           E    +        ++ I W   +   A+G     +            +    +    IT
Sbjct: 3   EKIKNVLWPLGFGILIIIAWQVGIIHDALGFKPFQLPVPSQIIKTLSDNFSKALTDTMIT 62

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   +V + +  II   V +     P              A P     P++    +    
Sbjct: 63  VSGALVGLALGCIIGFIVAVIATQFPKWGYTGLSVIAAFNAIPIVALSPIMNRWFTSGFA 122

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                ++++ +      +  N   G +      K++  S+       +  + LP   P  
Sbjct: 123 QKVGVVTVVCMAA----MAINSYRGLNDLKPFAKDLLESYAAPEKIIFFKLRLPNCLPSV 178

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566
           +T        A  A+++SE  +       T+G+G  I ++  KG    +    ++M   V
Sbjct: 179 LTALKINVAAAIMAAMISEYFA-----ASTSGIGFGIKDNLRKGMMA-MGWSYIVMAALV 232


>gi|290968480|ref|ZP_06560019.1| phosphate ABC transporter, permease protein PstA [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290781476|gb|EFD94065.1| phosphate ABC transporter, permease protein PstA [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 286

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 16/263 (6%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-QDVLYVIW 381
           +R    E F++            I  F +V  +  G+   +  ++    +Y  D + ++ 
Sbjct: 8   VRRKQYEVFMKGLMYICTGLTAAISLFLLVYVLIKGVPGINRSFLSTAPSYLSDRIGILP 67

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
               T++ ++  ++I   + +   I++        I S ++  A+ L+  P+ ++  LV 
Sbjct: 68  DILNTLYIMIAALLIVLPLGVGAAIYLTEYATNQKIVSIMEYTAETLSGIPSIIY-GLVG 126

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
             +   H+  +L    L +      I+  N      + P  ++E A       WR  R +
Sbjct: 127 MLIFANHMGTSLLAGALTLAIMNLPIIMRNTQESLKSVPISYREGAFGLGAGKWRVVRTV 186

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGL---GAYIA-----EST 547
           ++PG     +TG I + G     S      +     +H    GL   GA ++      + 
Sbjct: 187 VIPGCVDGVITGCILSVGRILGESAALLFTAGFAHALHGFADGLASPGATLSVSLYVYAK 246

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
           E G F        I+   VL +N
Sbjct: 247 EDGEFDIAFAIAAILMLLVLMIN 269



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 71/184 (38%), Gaps = 8/184 (4%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L A + +  ++ +L+ G+              ++  +  LP     T   M++A++I L
Sbjct: 26  GLTAAISLFLLVYVLIKGVPGINRSFLSTAPSYLSDRIGILPD-ILNTLYIMIAALLIVL 84

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
                 A      A ++++  ++    + +  IP + +    ++ F N     ++   L 
Sbjct: 85  PLGVGAAIYLTEYATNQKIVSIMEYTAETLSGIPSIIYGLVGMLIFANHMGTSLLAGALT 144

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
               +    +  +  +  +SL ++P    E +       W+    + +P  + G++   +
Sbjct: 145 ----LAIMNLPIIMRNTQESLKSVPISYREGAFGLGAGKWRVVRTVVIPGCVDGVITGCI 200

Query: 198 MSMS 201
           +S+ 
Sbjct: 201 LSVG 204


>gi|239978469|ref|ZP_04700993.1| ABC transporter permease protein [Streptomyces albus J1074]
 gi|291450365|ref|ZP_06589755.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291353314|gb|EFE80216.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 252

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           +     V+  I++I +S+P    L   ++ F     G  IG E AAI  +    +     
Sbjct: 50  NSVANKVIGQIVNIARSMP-FIILMVALMGFTRWLTGTTIGRE-AAIVPLAIGAIPFFAR 107

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  S+  +   L E  +S   S W     + VP S+P ++  +  +       +V    
Sbjct: 108 LVETSVREVDSGLVEAVQSMGGSTWTVVRKVLVPESLPSMIAGVTTT-------IVTLIG 160

Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                  +   G+G        ++    +++  + +L V+    Q 
Sbjct: 161 YSAMAGTVGAGGLGDIAIRYGYQRFESGLMWITVAVLAVVISLIQF 206



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 48/165 (29%), Gaps = 11/165 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW---LSLLMIFGTQWYILFN 467
               +  I     +  + P  +   + +   + +     +      + +  G   +    
Sbjct: 50  NSVANKVIGQIVNIARSMPFIILM-VALMGFTRWLTGTTIGREAAIVPLAIGAIPFFARL 108

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V        +   E   S   + W   R +++P   P  + G  T        S ++   
Sbjct: 109 VETSVREVDSGLVEAVQSMGGSTWTVVRKVLVPESLPSMIAGVTTTIVTLIGYSAMAGTV 168

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G       GLG        +     ++   + +   V++L +F
Sbjct: 169 GAG-------GLGDIAIRYGYQRFESGLMWITVAVLAVVISLIQF 206


>gi|239977937|ref|ZP_04700461.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291449849|ref|ZP_06589239.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291352798|gb|EFE79700.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 223

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 55/141 (39%), Gaps = 6/141 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             + Q  +   +  +  + +S L     A +     + G + V + +I +++P       
Sbjct: 21  GGITQRLTEHLVLTVVCLAVSCLIALPVALVLGHLGKGGALAVNLANIGRAVPTFA---- 76

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
             V  + L       +E   + A+    V  +  + Y  +  + RD    ++   ++G Q
Sbjct: 77  --VLVLLLLTPVGRWSEGPTVVALVLFAVPPLLTNAYVGMRGVDRDTVRAAKGMGMTGRQ 134

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
               + +P ++P ++  + ++
Sbjct: 135 VLTGVELPLALPMVMTGVRIA 155



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 2/153 (1%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
           ++  ++ +   +     +       +   VV + ++ +I +PV + +G      +     
Sbjct: 6   EAWRWLTDPAHWSGDGGITQRLTEHLVLTVVCLAVSCLIALPVALVLGHLGKGGALAVNL 65

Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
           A +  A P      +++        +    +  L++F     +L N   G      D   
Sbjct: 66  ANIGRAVPTFAVL-VLLLLTPVGRWSEGPTVVALVLF-AVPPLLTNAYVGMRGVDRDTVR 123

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            A    +TG +    + LP   P  +TG   A 
Sbjct: 124 AAKGMGMTGRQVLTGVELPLALPMVMTGVRIAA 156


>gi|227508103|ref|ZP_03938152.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227192332|gb|EEI72399.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++  ++IS              A +     ++   ++++ S+P +    F  +
Sbjct: 62  LFNSLYLLVLTLIISFPIALGSGIYLSEYAPNNWFTSLIRTAIEVLSSLPSVVVGLFGYL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +   V  + LA   A+    +  +T S+ +SL ++P    E   S  LS W+   
Sbjct: 122 VFVIKF--NVGFSILAGAIALTFFNLPLLTRSIEESLEDVPDLQREAGLSLGLSRWKTIT 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            +  P ++PG++  +++S  
Sbjct: 180 GIVFPAALPGILTGIILSAG 199



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 15/144 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF---RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           +++ +V+ +II+  I +  GI++         +S I+   ++L++ P+     +VV    
Sbjct: 65  SLYLLVLTLIISFPIALGSGIYLSEYAPNNWFTSLIRTAIEVLSSLPS-----VVVGLFG 119

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWR 495
           Y        +   ++ G      FN+     +            +E   S  ++ W+   
Sbjct: 120 YLVFVIKFNVGFSILAGAIALTFFNLPLLTRSIEESLEDVPDLQREAGLSLGLSRWKTIT 179

Query: 496 YIILPGIFPYYVTGAITACGGAWN 519
            I+ P   P  +TG I + G  + 
Sbjct: 180 GIVFPAALPGILTGIILSAGRVFG 203


>gi|21388709|dbj|BAC00818.1| phosphate transport system permease ABC transporter protein
           [Rhodobacter sphaeroides f. sp. denitrificans]
          Length = 449

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 6/158 (3%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILD 105
           D   +  +   L      +   M+  +V++L      +      A K+R   ++ V I +
Sbjct: 212 DASEVRPEAAGLGVAILGSAYMMIIVLVLALPIGVAASIYLXEFAPKNRWTDLIEVNIAN 271

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            + ++P + F    +  F+N+         +  +       +  +  +   SL  +P  +
Sbjct: 272 -LAAVPSIVFGILGLAIFINMMGLPQSAPIVGGLILTL-MTLPTIIIATRVSLAAVPPSI 329

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            + +     S  Q  ++  +P ++PG++   ++ M+  
Sbjct: 330 RDAALGVGASRMQAVFHHVLPLALPGILTGTIIGMARA 367



 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + +     ++II  ++ +P+G+               +  I+     LAA P+ VF  L
Sbjct: 224 GVAILGSAYMMIIVLVLALPIGVAASIYLXEFAPKNRWTDLIEVNIANLAAVPSIVFGIL 283

Query: 437 VVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++        P        L++   T   I+       +A P   ++ A     +  + 
Sbjct: 284 GLAIFINMMGLPQSAPIVGGLILTLMTLPTIIIATRVSLAAVPPSIRDAALGVGASRMQA 343

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 344 VFHHVLPLALPGILTGTIIGMARA 367


>gi|329295628|ref|ZP_08252964.1| binding-protein-dependent transport systems inner membrane
           component [Plautia stali symbiont]
          Length = 186

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 24  AFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              +V+G+  +  H G+    +P     +  +      L  +A  T   ++ A+++ +  
Sbjct: 10  LIAVVLGVWLLARHNGVPAYLLPAPQAVLEALWQKRQLLAHHALFTLAEIVLALLLGVGG 69

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             V A L A S  L  VL P++   Q+IP+       V++       KV+ A L   F  
Sbjct: 70  GVVLAVLMASSPLLRRVLFPLVTASQTIPVFALAPLLVLWLGFGIASKVVVAALILFF-- 127

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
                  +  S++  LC  P    E++++   S W+ FW +  P 
Sbjct: 128 ------PLCLSLFDGLCRTPAGWLELAQTLYPSRWRIFWRVRWPA 166



 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           +   P +   + P        P     PL+V  + +   +  +  +L++ F     +  +
Sbjct: 77  MASSPLLRRVLFPLVTASQTIPVFALAPLLVLWLGFGIASKVVVAALILFF----PLCLS 132

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           +  G    P  + E+A + + + WR +  +  P 
Sbjct: 133 LFDGLCRTPAGWLELAQTLYPSRWRIFWRVRWPA 166


>gi|325068275|ref|ZP_08126948.1| ABC-type proline/glycine betaine transport system, permease
           component [Actinomyces oris K20]
          Length = 234

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 75/204 (36%), Gaps = 12/204 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ ++  +     L+ + A+V SL+     A LA  +R L  +LV    ++ ++P L   
Sbjct: 7   NLPTIAGHLLAHLLQAVPAIVASLILAIPIARLARVARPLRALLVTGSSLLYAVPSLALF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +              L  I A+    +  +  +   +L  +   + + + +  +  
Sbjct: 67  VILPIILATGIRDP-----LNVIVALTLYGLALLVPATADALDAVDARVLDAATAMGMGR 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + F  + +P + P ++  + +         V++  +     V+ +  +G       +  
Sbjct: 122 LRCFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRG 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               I+  ++    +  + D L+ 
Sbjct: 175 ITAEIVTGLVATAALALVLDGLVL 198



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 73/201 (36%), Gaps = 8/201 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  +       + + V  I+ + I+ IP+         + + +   + LL A P+  
Sbjct: 5   LANLPTIAGHLLAHLLQAVPAIVASLILAIPIARLARVARPLRALLVTGSSLLYAVPSLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F ++   ++    +P   +  L ++G    ++        A      + A++  +   R
Sbjct: 65  LFVILPIILATGIRDPLNVIVALTLYGLA-LLVPATADALDAVDARVLDAATAMGMGRLR 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P  +TG           ++ +   +     L    LG    +  ++G  
Sbjct: 124 CFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRGIT 176

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            E+V G++      L L+  +
Sbjct: 177 AEIVTGLVATAALALVLDGLV 197


>gi|288940131|ref|YP_003442371.1| phosphate ABC transporter inner membrane subunit PstA
           [Allochromatium vinosum DSM 180]
 gi|288895503|gb|ADC61339.1| phosphate ABC transporter, inner membrane subunit PstA
           [Allochromatium vinosum DSM 180]
          Length = 434

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              +V++ L +F     AA          R   ++   ++ + ++P + F    +  F+ 
Sbjct: 220 FYTLVLTFLLSFPIGVGAALYLEEFAPKNRWTDLIEVNVNNLAAVPSIVFGLLGLAVFIG 279

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            + G      L A   +    +  +  +   +L ++P  + E +     S  Q  ++  +
Sbjct: 280 FF-GVPRSTPLVAALVMTLMTLPTIIIASRVALKSVPPSIREAALGVGASPLQTQFHHVL 338

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++PG++   ++ M+  
Sbjct: 339 PLALPGILTGSIIGMARA 356



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 90/258 (34%), Gaps = 17/258 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
           +     S++RV   +  +   +     +   + +I +        ++  +      + + 
Sbjct: 163 DRNAPASDRRVGDQMIAWVDRLEAEGRVAKRFNTIFFTHGTSREPELAGIAGALMGSFYT 222

Query: 390 VVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +V+  +++  I +   +++     +   +  I+     LAA P+ VF  L ++    +  
Sbjct: 223 LVLTFLLSFPIGVGAALYLEEFAPKNRWTDLIEVNVNNLAAVPSIVFGLLGLAVFIGFFG 282

Query: 447 NPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            P    L  +L+M   T   I+        + P   +E A     +  +   + +LP   
Sbjct: 283 VPRSTPLVAALVMTLMTLPTIIIASRVALKSVPPSIREAALGVGASPLQTQFHHVLPLAL 342

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLG----------AYIAESTEKGSF 552
           P  +TG+I     A   +    +       +    G               A+S E+G  
Sbjct: 343 PGILTGSIIGMARALGETAPLLMIGMIAFIVDIPKGFNDAATVLPVQIFLWADSPERGFV 402

Query: 553 PEVVLGVLIMCCFVLALN 570
                 +L++  F+  +N
Sbjct: 403 ERTSAAILVLLAFLFVMN 420


>gi|225026455|ref|ZP_03715647.1| hypothetical protein EUBHAL_00704 [Eubacterium hallii DSM 3353]
 gi|224956221|gb|EEG37430.1| hypothetical protein EUBHAL_00704 [Eubacterium hallii DSM 3353]
          Length = 224

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 21/196 (10%)

Query: 78  ISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV---I 132
           +S++ TF     AA+   R     +  ILD + ++P++  L  TV  F  LY   +   I
Sbjct: 19  LSIIITFFLGVAAAQFVFRLKSKTMKTILDGLFTLPLV--LPPTVAGFFLLYIFGMRRPI 76

Query: 133 GAELAAIFAIFTSQVW-------------NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           G  L   FA+  +  W              M  S   +   +  D+    R+  +S W  
Sbjct: 77  GKFLIEYFAVKIAFSWGATVLAAVVISFPLMYRSARGAFEQVNPDVLSAGRTLGMSEWNI 136

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + PG++   +++ + G     A+ MI  G+       +   +  A+    + 
Sbjct: 137 FWKVQMPIAWPGVISGAVLAFARGLGEFGATAMIA-GNIRGKTRTLPLAVYSAVASGKMD 195

Query: 240 AILYAMLTMLGVIFLY 255
                ++ ++G+ F+ 
Sbjct: 196 DAGQYVVILVGISFIV 211


>gi|295129961|ref|YP_003580624.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|291377009|gb|ADE00864.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|313772952|gb|EFS38918.1| ABC transporter, permease protein [Propionibacterium acnes
           HL074PA1]
 gi|313811088|gb|EFS48802.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA1]
 gi|313831854|gb|EFS69568.1| ABC transporter, permease protein [Propionibacterium acnes
           HL007PA1]
 gi|313834604|gb|EFS72318.1| ABC transporter, permease protein [Propionibacterium acnes
           HL056PA1]
 gi|313840165|gb|EFS77879.1| ABC transporter, permease protein [Propionibacterium acnes
           HL086PA1]
 gi|314974605|gb|EFT18700.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA1]
 gi|314977202|gb|EFT21297.1| ABC transporter, permease protein [Propionibacterium acnes
           HL045PA1]
 gi|314985700|gb|EFT29792.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA1]
 gi|315097441|gb|EFT69417.1| ABC transporter, permease protein [Propionibacterium acnes
           HL038PA1]
 gi|327331474|gb|EGE73213.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL096PA2]
 gi|327447136|gb|EGE93790.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA1]
 gi|327449829|gb|EGE96483.1| ABC transporter, permease protein [Propionibacterium acnes
           HL043PA2]
 gi|328761817|gb|EGF75330.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL099PA1]
          Length = 215

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 21/219 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   +  ++ +++SLL +      A ++R    +LVP   +L  + S+
Sbjct: 6   ISENWDQIWQLTSHHAVLSVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVLLPLIL--------GTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              +      I   ++  L +  ++D ++    R +  W
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLTPW 209



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F L+   +    L+P   +  L ++G   
Sbjct: 37  PLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVVALTLYGIAL 96

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +         +     +  A +   +  + +  + LP   P  V G         +   
Sbjct: 97  LVRTAT-DAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLSLVS 155

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 156 VGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFD 196


>gi|37676030|ref|NP_936426.1| ABC-type phosphate transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37200570|dbj|BAC96396.1| ABC-type phosphate transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 334

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 94/264 (35%), Gaps = 23/264 (8%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RIF  +F   A + ++ +  I    I+E+        +  I L    LP  A      M+
Sbjct: 58  RIFHGLFLTSAVIGIVSLAVIAYFIIRESIPAFQEAGVSGIVLGQDWLPP-ALYGVATMI 116

Query: 74  SAMVISLLFTFVYA----------TLAAKSRRLGMVLVPILDIMQSIPILGF----LTFT 119
            A ++S     +                  +R+  ++ P ++++  IP + +    L   
Sbjct: 117 VASMVSTFGAVLVGVPVGVLTAVFIAEIAPKRVADIIRPAVELLAGIPSVVYGFFGLVII 176

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V    N++        LA I  +    +  +      S+  +PR  +E S +   S    
Sbjct: 177 VPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKIFT 236

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS--------YIAL 231
            + L VP +  G++  +++ +       +A  M++     +P   + S         I +
Sbjct: 237 IFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEGLLDSARTLTANIAIEM 296

Query: 232 AIKEQDLLAILYAMLTMLGVIFLY 255
           +         LYA   +L V  + 
Sbjct: 297 SYASGVHANALYATGVVLLVFIMM 320



 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+ +       N  L   +++       
Sbjct: 147 KRVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPT 206

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 207 VITVSETSIRAVPRAYKEGSLALGASKIFTIFKLLVPAARSGIMTGVILGIGRALGETMA 266

Query: 524 SEVASWGHIHLRTTGL 539
             +       +    L
Sbjct: 267 IIMVMGNAPAMPEGLL 282


>gi|313893869|ref|ZP_07827435.1| D-methionine transport system permease protein MetI [Veillonella
           sp. oral taxon 158 str. F0412]
 gi|313441433|gb|EFR59859.1| D-methionine transport system permease protein MetI [Veillonella
           sp. oral taxon 158 str. F0412]
          Length = 217

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L      T    + + V+++L       +   + +        L  VL  I++  +S+P 
Sbjct: 9   LITGTLDTLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVALNKVLGAIVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   A +  +  + +  +   +  S+ +I   + E ++S 
Sbjct: 68  FIILMVAIIPFTRMVVGTSIGTTAACV-PLTIAAIPFLARLVETSIKDINYGVIEAAQSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S +Q  W + +P ++P ++ N+
Sbjct: 127 GASPFQIIWKVLLPEALPTIIDNV 150



 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 14/134 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T+   ++  ++A ++ IP+G+ +             ++  +        + P  +     
Sbjct: 16  TLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVALNKVLGAIVNATRSVPFIILMVAI 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P     V          + L +        L               E A S   + ++ 
Sbjct: 76  IPFTRMVVGTSIGTTAACVPLTIAAIPFLARLVETS--IKDINYGVIEAAQSMGASPFQI 133

Query: 494 WRYIILPGIFPYYV 507
              ++LP   P  +
Sbjct: 134 IWKVLLPEALPTII 147


>gi|289705993|ref|ZP_06502367.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557330|gb|EFD50647.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 305

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 88/262 (33%), Gaps = 17/262 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY---------ASRTT 69
            + L   + V  +  +          P D+ +   +     ++               T 
Sbjct: 37  WWILTVLIGVWCLFPLFSIFATSFKTPADLANGKLLPTQWSTVNYEEIFVGGSRELFLTA 96

Query: 70  LR-----MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           LR      + A +I+++   + A   A+    G  LV  + +M  + +   ++     F 
Sbjct: 97  LRNSIGITVIATIIAVILATLCAYAIARLDFPGKRLVLTVSLM--VSMFPVISLVTPLFN 154

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    +  I    +  +    +++      IP +L++ ++    +  + F  + 
Sbjct: 155 MWRTLGLYDTWIGLIIPYLSLTLPISIWTLAAFFRQIPWELDQAAQVDGATPLEAFRKVI 214

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDLLAILY 243
           VP + PG+    +++    W   V    +   +T   +P  +  +   +  E    AI  
Sbjct: 215 VPLAAPGVFTTAIIAFFIAWNDFVFGISLTSTETARTVPAALAFFTGASQFESPTGAISA 274

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A + +   I +      R ++ 
Sbjct: 275 AAIIVTIPIVILVLAFQRQIVA 296



 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 2/193 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVFF-PLVVSCVSY 443
           ++   V+  IIA I+       I        ++     L+ + FP      PL     + 
Sbjct: 100 SIGITVIATIIAVILATLCAYAIARLDFPGKRLVLTVSLMVSMFPVISLVTPLFNMWRTL 159

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +  + L +  +  T    ++ + A     P +  + A     T    +R +I+P   
Sbjct: 160 GLYDTWIGLIIPYLSLTLPISIWTLAAFFRQIPWELDQAAQVDGATPLEAFRKVIVPLAA 219

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI A   AWN  +     +            A+   +++  S    +    I+ 
Sbjct: 220 PGVFTTAIIAFFIAWNDFVFGISLTSTETARTVPAALAFFTGASQFESPTGAISAAAIIV 279

Query: 564 CFVLALNRFLWHP 576
              + +    +  
Sbjct: 280 TIPIVILVLAFQR 292


>gi|237807026|ref|YP_002891466.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
 gi|237499287|gb|ACQ91880.1| binding-protein-dependent transport systems inner membrane
           component [Tolumonas auensis DSM 9187]
          Length = 217

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLT 117
             T   + ++ +   +                 A       VL  ++++ +S+P    L 
Sbjct: 14  GETLWMVFASALFGTILGVPLGVALHITKPGQIAAHPIFNKVLGTVVNVGRSVP-FIILL 72

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             ++    L  G  IG   AAI  +    +  +   +  +L  IP  L E +++   +  
Sbjct: 73  VAIIPLTRLIVGTSIGTN-AAIVPLAIGAIPFLARLVEGALMEIPAGLIEAAQAMGATHR 131

Query: 178 QKFWYLGVPFSMPGLVWNMMMSM 200
           Q    + +P ++PG++  +++++
Sbjct: 132 QIIRKVMLPEALPGILNAIVITL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 19/210 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V    +  +I+ +P+G+         I   P  +  +     +  + P  +    +
Sbjct: 16  TLWMVFASALFGTILGVPLGVALHITKPGQIAAHPIFNKVLGTVVNVGRSVPFIILLVAI 75

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    +  N  +  L I G   ++   V       P    E A +   T  +  
Sbjct: 76  IPLTRLIVGTSIGTNAAIVPLAI-GAIPFLARLVEGALMEIPAGLIEAAQAMGATHRQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P  +   +       N S ++     G +       G    +       P 
Sbjct: 135 RKVMLPEALPGILNAIVITLVALVNYSAMAGAIGGGGLGDVGIRYGYQRFD-------PA 187

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           ++L  + +   ++ L + +   L       
Sbjct: 188 IMLITVAILVILVQLIQSIGERLVKRVDHR 217


>gi|150009023|ref|YP_001303766.1| putative ABC transporter permease [Parabacteroides distasonis ATCC
           8503]
 gi|255014855|ref|ZP_05286981.1| putative ABC transporter permease protein [Bacteroides sp. 2_1_7]
 gi|262383917|ref|ZP_06077053.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_33B]
 gi|301312079|ref|ZP_07218001.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           20_3]
 gi|149937447|gb|ABR44144.1| putative ABC transporter permease protein [Parabacteroides
           distasonis ATCC 8503]
 gi|262294815|gb|EEY82747.1| phosphate ABC transporter, permease PstA [Bacteroides sp. 2_1_33B]
 gi|300830181|gb|EFK60829.1| phosphate ABC transporter, permease protein PstA [Bacteroides sp.
           20_3]
          Length = 295

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 73/196 (37%), Gaps = 8/196 (4%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI---VDIVPITLDVHSLPQYASRT 68
           S+++    F  L++++V+ +  IL   I +                 +    +      T
Sbjct: 17  SQQVAFGFFSFLSYLVVVILFVILGFIILKGASVISWDFLTQAPQEGMTSGGIFPAIVGT 76

Query: 69  TLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
              ++ + +IS     +        A + +L   +  + + +  +P + F  F +  F++
Sbjct: 77  LYLVIGSSLISFPIGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLFVS 136

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
                   + +A  F +    +  +  +  ++L +I       S +   +  Q    + +
Sbjct: 137 TLGWGD--SIIAGSFTLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRVVL 194

Query: 186 PFSMPGLVWNMMMSMS 201
           P + P ++  +++S+ 
Sbjct: 195 PMAFPNIITGLILSIG 210



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASI 399
            L +    V+ G  I      I +       Q+      +      T++ V+   +I+  
Sbjct: 30  YLVVVILFVILGFIILKGASVISWDFLTQAPQEGMTSGGIFPAIVGTLYLVIGSSLISFP 89

Query: 400 IWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSL 454
           I I  GI++        +   I+     L+  P+ VF  F + +   +    +  +  S 
Sbjct: 90  IGIMSGIYMNEYATNGKLIRFIRIMTNNLSGVPSVVFGLFGMSLFVSTLGWGDSIIAGSF 149

Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +   +   I+        +  + F+  + +   T  +  R ++LP  FP  +TG I + 
Sbjct: 150 TLALMSLPLIIRTTEEALKSIDDSFRHGSLALGATKLQTIRRVVLPMAFPNIITGLILSI 209

Query: 515 G 515
           G
Sbjct: 210 G 210


>gi|270296460|ref|ZP_06202660.1| phosphate ABC transporter, permease PstA [Bacteroides sp. D20]
 gi|270273864|gb|EFA19726.1| phosphate ABC transporter, permease PstA [Bacteroides sp. D20]
          Length = 286

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 66/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    ++  I+  +++          +      ++    +      T   M  + + +  
Sbjct: 21  LSVVGILFAILGFIIYKGIGVIDWEFLTTAPANSMTAGGILPAIVGTFCLMAGSALFAFP 80

Query: 82  FTFVYATLAAKS---RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +      +      +   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 81  VGVMSGIYMNEYVPKGWVVRFIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SILAG 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L  IP  + E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 139 SLTLGLLSLPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGLIL 198

Query: 199 SMS 201
           ++ 
Sbjct: 199 ALG 201



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA--SI 399
            +L +    ++  +   I ++ IG I   F        +  G I    V    ++A  ++
Sbjct: 17  RLLSLSVVGILFAILGFIIYKGIGVIDWEFLTTAPANSMTAGGILPAIVGTFCLMAGSAL 76

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G           +   I+     L+  P+ VF    ++    Y    +  L
Sbjct: 77  FAFPVGVMSGIYMNEYVPKGWVVRFIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGDSIL 136

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +   +   ++        A P+  +E + +   T  +   ++ILP   P  +TG 
Sbjct: 137 AGSLTLGLLSLPLVIRTTEEALKAIPDSMREGSRALGATKLQTIWHVILPMGMPNIITGL 196

Query: 511 ITACG 515
           I A G
Sbjct: 197 ILALG 201


>gi|153003293|ref|YP_001377618.1| phosphate ABC transporter inner membrane subunit PstC
           [Anaeromyxobacter sp. Fw109-5]
 gi|152026866|gb|ABS24634.1| phosphate ABC transporter, inner membrane subunit PstC
           [Anaeromyxobacter sp. Fw109-5]
          Length = 325

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 76  MVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMN 125
             +++L +      AA        RRL  VL P ++++  IP  +LGF    V+      
Sbjct: 106 TAVAMLVSVPVGIAAAVFTSEFAPRRLREVLKPTIELLAGIPSVVLGFFALMVMATVLQG 165

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +        + A  A+  + V  +      +L  +PR   E S +   + W+  + + +
Sbjct: 166 AFGFTSRLNAIVAGLALALTVVPVIFTVSEDALAAVPRSYREASLALGATRWETSFKVVL 225

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           P + PG++  +++         +   M      +
Sbjct: 226 PAAAPGVLAAVVLGFGRSIGETMIVLMASGNAAM 259



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 16/185 (8%)

Query: 371 FTYQDVLYVIWLGCITMFRVVV-LIIIASIIWIPVGIWIGFR------PHISSKIQPFAQ 423
           F++Q V  V     + +F   + +  +A ++ +PVGI             +   ++P  +
Sbjct: 82  FSWQPVSDVPKYSMVPLFVGTLKVTAVAMLVSVPVGIAAAVFTSEFAPRRLREVLKPTIE 141

Query: 424 LLAAFPANV--FFPLVVSCVSY-----YHLNPNLWLSLLMIFGTQWYILFNVI-AGASAF 475
           LLA  P+ V  FF L+V          +    N  ++ L +  T   ++F V     +A 
Sbjct: 142 LLAGIPSVVLGFFALMVMATVLQGAFGFTSRLNAIVAGLALALTVVPVIFTVSEDALAAV 201

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  ++E + +   T W     ++LP   P  +   +   G +   +++  +AS G+  + 
Sbjct: 202 PRSYREASLALGATRWETSFKVVLPAAAPGVLAAVVLGFGRSIGETMIVLMAS-GNAAMT 260

Query: 536 TTGLG 540
           T  LG
Sbjct: 261 TWSLG 265


>gi|220932994|ref|YP_002509902.1| phosphate ABC transporter, permease protein PstA [Halothermothrix
           orenii H 168]
 gi|219994304|gb|ACL70907.1| phosphate ABC transporter, permease protein PstA [Halothermothrix
           orenii H 168]
          Length = 318

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 88/218 (40%), Gaps = 13/218 (5%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTV 120
            + L  + AMV+S+      A   +     +L   + PI++++  +P + +    +    
Sbjct: 95  ASLLVTVGAMVVSVPLGISSAIFISYILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILA 154

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
            +  +L+        L A   +    +  ++     ++ ++P+     S +   + W+  
Sbjct: 155 PFIRDLFNLPTGLNGLTASIMLGIMALPTISSLAEDAISSVPKSFRNASLALGGTKWETI 214

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIK 234
             + +P +  G+V  +++ M       +   M+  G + +      PL  + + IA  + 
Sbjct: 215 SKVILPTASSGIVTAVILGMGRAIGETMTVLMVAGGASAMPDSILRPLRPMTANIAAEMG 274

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS-NKFR 271
           E  + +  Y  L  +G+I  +  LLF  +   +  +F+
Sbjct: 275 EAPVGSEHYHALFGIGIILFFITLLFNIIADIASQRFK 312



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 10/177 (5%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAF 428
           + Y D   ++ L C ++   V  ++++  + I   I+I       + + ++P  +LLA  
Sbjct: 81  YPYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISYILPDKLKNYVKPIVELLAGV 140

Query: 429 PANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           P+ V+         P +    +       L  S+++       I        S+ P  F+
Sbjct: 141 PSVVYGLFGMKILAPFIRDLFNLPTGLNGLTASIMLGIMALPTISSLAEDAISSVPKSFR 200

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             + +   T W     +ILP      VT  I   G A   ++   + + G   +  +
Sbjct: 201 NASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGETMTVLMVAGGASAMPDS 257


>gi|308050100|ref|YP_003913666.1| binding-protein-dependent transport systems inner membrane
           component [Ferrimonas balearica DSM 9799]
 gi|307632290|gb|ADN76592.1| binding-protein-dependent transport systems inner membrane
           component [Ferrimonas balearica DSM 9799]
          Length = 217

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L     +T   +  + +++ L       +           +  +  VL  +++  +S+P 
Sbjct: 9   LWNATQQTLQMVFLSGLLAALVGIPLGVVLHLTKTGQLMANPWVNRVLGTLVNAGRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG  +AA+  +    +  +   +  +L  +P  L E +++ 
Sbjct: 68  FIILLVAIIPFTRMVVGTSIGT-MAAVVPLTVGAIPFIARLIEGALMEVPSGLVEAAQAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PG+V ++ +++
Sbjct: 127 GASPAQIVSKVILPEALPGIVNSITITL 154



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V +  ++A+++ IP+G+ +           P ++  +        + P  +   + 
Sbjct: 16  TLQMVFLSGLLAALVGIPLGVVLHLTKTGQLMANPWVNRVLGTLVNAGRSVPFIILL-VA 74

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +  ++     ++    G   +I   +       P+   E A +   +  +  
Sbjct: 75  IIPFTRMVVGTSIGTMAAVVPLTVGAIPFIARLIEGALMEVPSGLVEAAQAMGASPAQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             +ILP   P  V           + S ++     G +       G Y      +     
Sbjct: 135 SKVILPEALPGIVNSITITLVTLVSYSAMAGAVGAGGLGDLGIRYGYY------RFELDV 188

Query: 555 VVLGVLIMCCFVLAL 569
           ++  ++I+   V AL
Sbjct: 189 MLATIVILLVLVQAL 203


>gi|302553299|ref|ZP_07305641.1| ABC sugar transporter [Streptomyces viridochromogenes DSM 40736]
 gi|302470917|gb|EFL34010.1| ABC sugar transporter [Streptomyces viridochromogenes DSM 40736]
          Length = 278

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 75/227 (33%), Gaps = 7/227 (3%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVL 100
              P    +   +        +    + +      V++LL     A   A+   R   ++
Sbjct: 48  LPSPLSFENYRAVFDPAQGFGRALLNSLVVAGITTVLALLLATFTAYAMARLEFRFKRLI 107

Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159
           + ++      P++  +   +  F ++          + ++       VWN+T        
Sbjct: 108 LTLIIATSMFPVVSIVVPLLKLFTDIGWINTYQSMIVPSMSFALPLAVWNLTTFF----R 163

Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF-FVVASEMIVVGDT 218
            +P +LE  +     +  Q F  + VP + PG+    +++    W  F++A  M      
Sbjct: 164 QMPDELEHAAMVDGCTRGQAFRKVIVPLAAPGIFTTAIITFIAAWNEFLIALSMTNKPGM 223

Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
                 I  +      E    + + A + +   + +   L  R ++ 
Sbjct: 224 QTATVAISKFTGATTYETPFGSQMAAGVLVTVPLVVMVLLFQRRIVA 270



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 3/197 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPAN-VFFPLVVSCVSY 443
           ++    +  ++A ++       +          I       + FP   +  PL+      
Sbjct: 74  SLVVAGITTVLALLLATFTAYAMARLEFRFKRLILTLIIATSMFPVVSIVVPLLKLFTDI 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +N    + +  +       ++N+       P++ +  A     T  + +R +I+P   
Sbjct: 134 GWINTYQSMIVPSMSFALPLAVWNLTTFFRQMPDELEHAAMVDGCTRGQAFRKVIVPLAA 193

Query: 504 PYYVTGAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           P   T AI     AWN   I   + +   +   T  +  +   +T +  F   +   +++
Sbjct: 194 PGIFTTAIITFIAAWNEFLIALSMTNKPGMQTATVAISKFTGATTYETPFGSQMAAGVLV 253

Query: 563 CCFVLALNRFLWHPLYL 579
              ++ +       +  
Sbjct: 254 TVPLVVMVLLFQRRIVA 270


>gi|227889697|ref|ZP_04007502.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849742|gb|EEJ59828.1| phosphate ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus johnsonii ATCC 33200]
          Length = 291

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 71/211 (33%), Gaps = 9/211 (4%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           +     R+   +      ++    + +    I   +  F +  +           F  + 
Sbjct: 3   RAKIKDRLMTGIFYAIGWIMLAFLLYLMLTIIFDGLKGFQWDFLGAAGNGIFNQFFNTIY 62

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSY 443
           L+ ++ ++ +P+GI  G             +  +   + L++ P+ V   F  +   +  
Sbjct: 63  LVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFIMWT 122

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L  +L +   +   I         + P ++KE + S   T     R +++P   
Sbjct: 123 GMSWNILAGALTISILSIPLITTETNNAIRSLPVEYKEGSLSLGATKSETIRKVLIPAAM 182

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           P  +TG I A G  +  +      S    ++
Sbjct: 183 PQILTGVIMAAGRGFGEAAALLYTSGQSTYI 213



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFM 124
           T   +  ++++S+          A+  + G  L      ++ + S+P +    F  + F+
Sbjct: 60  TIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFI 119

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    LA    I    +  +T     ++ ++P + +E S S   +  +    + 
Sbjct: 120 MW--TGMSWNILAGALTISILSIPLITTETNNAIRSLPVEYKEGSLSLGATKSETIRKVL 177

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           +P +MP ++  ++M+   G F   A+ +   G +  
Sbjct: 178 IPAAMPQILTGVIMAAGRG-FGEAAALLYTSGQSTY 212


>gi|172064071|ref|YP_001811722.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
 gi|171996588|gb|ACB67506.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia ambifaria MC40-6]
          Length = 392

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 12/196 (6%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++R  F     L+A  +VI  I++ L           ++    +  D     + A+R   
Sbjct: 135 LARLAFGPWRRLVALAVVIAAISVPL--ASGWWDGLSVMREYAVRSD--DFWREATRHVS 190

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
               ++  +L+         A+   +  V++P+L+++Q+IP +      +     L    
Sbjct: 191 LAGGSVAAALVAGVPLGIACARIAPVRTVVMPVLNVVQTIPSIAMYGLMMAPLGLLAAHV 250

Query: 131 VIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            + A L         A+ A+F   +  +  S+   L  +P  + E +R+  ++  Q+   
Sbjct: 251 PLAAALGIRGIGVAPALLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMGMTRVQRLLG 310

Query: 183 LGVPFSMPGLVWNMMM 198
           + +  ++P ++  + +
Sbjct: 311 VDLVLALPVILSGVRI 326



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 61/188 (32%), Gaps = 13/188 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
             +   +    V+  +++ +A      +     Y       W        +    + A++
Sbjct: 141 GPWRRLVALAVVIAAISVPLASGWWDGLSVMREYAVRSDDFWREATRHVSLAGGSVAAAL 200

Query: 400 I-WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL---- 454
           +  +P+GI       + + + P   ++   P+   + L+++ +     +  L  +L    
Sbjct: 201 VAGVPLGIACARIAPVRTVVMPVLNVVQTIPSIAMYGLMMAPLGLLAAHVPLAAALGIRG 260

Query: 455 --------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                    +   +   I  +V+ G    P    E A +  +T  +    + L    P  
Sbjct: 261 IGVAPALLALFLYSLLPIASSVVVGLEQVPPHVTEAARAMGMTRVQRLLGVDLVLALPVI 320

Query: 507 VTGAITAC 514
           ++G     
Sbjct: 321 LSGVRIVL 328


>gi|327439647|dbj|BAK16012.1| ABC-type phosphate transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 292

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 88/211 (41%), Gaps = 13/211 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLV--IGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61
            +++   +++R+  N    + F++     ++++ +   +  +     +D+  IT     +
Sbjct: 6   EDLVMKRMNKRLNSNKMWKIIFIIATSFALVSLGMLLYRILSQGIGFLDMNFITNFASRI 65

Query: 62  PQYASRTTLRMLSAMVISLL--FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPI 112
           P+ A      + S  ++S++   + +     A       K  +L   +   +  +  +P 
Sbjct: 66  PENAGIKAALVGSLWLMSVVAPVSIILGVSTALYLEEYAKQNKLNDFIRINISNLAGVPS 125

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           + F    +  F+ L+      + LAA   +    +  +  +  +++ ++P +  E S   
Sbjct: 126 IVFGLLGLTIFVRLF--GFEKSILAAGLTMSLLILPVIIVAAQEAIRSVPNEQREASYGM 183

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             + WQ    + +P ++PG++   ++++S  
Sbjct: 184 GATKWQTIVRVVLPAAIPGILTGSILALSRA 214



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 73/194 (37%), Gaps = 6/194 (3%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
              ++      S+ L      +   ++ GI +  + +I N  +   +   +      +++
Sbjct: 21  KMWKIIFIIATSFALVSLGMLLYRILSQGIGFLDMNFITNFASRIPENAGIKAALVGSLW 80

Query: 389 RVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
            + V+  ++ I+ +   +++     +  ++  I+     LA  P+ VF    L +    +
Sbjct: 81  LMSVVAPVSIILGVSTALYLEEYAKQNKLNDFIRINISNLAGVPSIVFGLLGLTIFVRLF 140

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L   L M       I+        + PN+ +E +     T W+    ++LP   
Sbjct: 141 GFEKSILAAGLTMSLLILPVIIVAAQEAIRSVPNEQREASYGMGATKWQTIVRVVLPAAI 200

Query: 504 PYYVTGAITACGGA 517
           P  +TG+I A   A
Sbjct: 201 PGILTGSILALSRA 214


>gi|311104535|ref|YP_003977388.1| binding-protein-dependent transporter inner membrane component
           family protein 16 [Achromobacter xylosoxidans A8]
 gi|310759224|gb|ADP14673.1| binding-protein-dependent transport system inner membrane component
           family protein 16 [Achromobacter xylosoxidans A8]
          Length = 264

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 26/272 (9%)

Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367
           P +    +  R               + + Q    ++   W  +   V +  + Q     
Sbjct: 8   PAAGASARTSRAWSAAGVLLLLLAWHVAARQLGPLLMATPWEALRAVVPLVRSPQ----- 62

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
                            +++ R+ + ++  + I   +G+  G    +   I+P   LL A
Sbjct: 63  -----------FFANAGVSLIRIGIGVLAGASIGFALGVLAGHSARLRGLIEPLRWLLMA 111

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P  V   L +              +L+M  G    +  N + G         E+   + 
Sbjct: 112 MPPVVVVVLAMLWFGLGSPMVIFITTLMMAPG----MYVNTVKGMLHVDRKLIEMTHVYR 167

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              W   R++ LP +    +   + A  G     +++EV           G+G  +A + 
Sbjct: 168 YGPWLRLRHLYLPALSAPLLAALLIAACGGVRLVVMAEVLG------AENGVGYALANAR 221

Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579
                 E+   VL++   V  L      PL  
Sbjct: 222 STFDTAELFAWVLLILGLVALLEFAFLQPLQR 253



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 92/229 (40%), Gaps = 14/229 (6%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P + +  V   +        A  + +R+   ++      F    LA  S RL  ++ 
Sbjct: 44  MATPWEALRAVVPLVRSPQFFANAGVSLIRIGIGVLAGASIGFALGVLAGHSARLRGLIE 103

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
           P+  ++ ++P +  +   +++F    P          IF         M  +  + + ++
Sbjct: 104 PLRWLLMAMPPVVVVVLAMLWFGLGSP--------MVIFITTLMMAPGMYVNTVKGMLHV 155

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            R L E++  +R   W +  +L +P     L+  ++++  GG   VV +E++   +    
Sbjct: 156 DRKLIEMTHVYRYGPWLRLRHLYLPALSAPLLAALLIAACGGVRLVVMAEVLGAEN---- 211

Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270
             G+G  +A A    D   +   +L +LG++ L +    +P+     ++
Sbjct: 212 --GVGYALANARSTFDTAELFAWVLLILGLVALLEFAFLQPLQRRLGRW 258


>gi|296117708|ref|ZP_06836292.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295969439|gb|EFG82680.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 312

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 85/256 (33%), Gaps = 31/256 (12%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAW----------QSIGYIVNHFTYQDVLYVIWL 382
                +R + +  +    +   V   +AW          +     +   T+   L     
Sbjct: 12  PGPKGRRNNRIYSVIAAVIFLAVIAWVAWTLNNNGQFESRLWTPFLQSQTWTTYLLPGLR 71

Query: 383 GCITMFRVVVLIIIASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           G  T+F     II+A I  + +G+  +     +        +   A P  +         
Sbjct: 72  G--TLFSAFASIILACIFGVVLGLGRLSEHRIVRWICGVIVEFFRAIPVLLLMIFAYQLF 129

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFN--VIA-----GASAFPNDFKEVASSFHITGWRWW 494
           + Y L P+  L+   +       L+N  VIA     G  + P    E A +  ++     
Sbjct: 130 AVYDLVPSQQLAFSAVVLAL--TLYNGSVIAEILRSGIRSLPKGQTEAAKAIGLSHRLTM 187

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP      +   I     A   S +      G++ +  +G    I  ++   +F  
Sbjct: 188 YRVLLPQAIASMLPALIAQMVIALKDSALG--YQIGYVEIVRSG----IQSASYNQNF-- 239

Query: 555 VVLGVLIMCCFVLALN 570
            +  ++I+   ++ +N
Sbjct: 240 -LASLVIVGIIMVLIN 254



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 92/242 (38%), Gaps = 18/242 (7%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV--PRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           I+ ++A V+ + +I  +   +        R     +        L      T     +++
Sbjct: 22  IYSVIAAVIFLAVIAWVAWTLNNNGQFESRLWTPFLQSQTWTTYLLPGLRGTLFSAFASI 81

Query: 77  VISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGA 134
           +++ +F  V      ++ R +  +   I++  ++IP+L  + F    F +         A
Sbjct: 82  ILACIFGVVLGLGRLSEHRIVRWICGVIVEFFRAIPVLLLMIFAYQLFAVYDLVPSQQLA 141

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MP 190
             A + A+       +   +   + ++P+   E +++  LS     + + +P +    +P
Sbjct: 142 FSAVVLALTLYNGSVIAEILRSGIRSLPKGQTEAAKAIGLSHRLTMYRVLLPQAIASMLP 201

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            L+  M++++         +    +G   I   GI      A   Q+ LA L  +  ++ 
Sbjct: 202 ALIAQMVIALKDS------ALGYQIGYVEIVRSGI----QSASYNQNFLASLVIVGIIMV 251

Query: 251 VI 252
           +I
Sbjct: 252 LI 253


>gi|293375730|ref|ZP_06622002.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325838716|ref|ZP_08166631.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|292645673|gb|EFF63711.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325490766|gb|EGC93073.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 222

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 67/167 (40%), Gaps = 10/167 (5%)

Query: 93  SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152
           ++ +  +L   ++I +SIP    L   ++ F     G ++G   AA+ A+          
Sbjct: 54  NKWINRILSAFVNIFRSIP-FVILIILLLPFTKWLVGSMLGPN-AALPALIIGAAPFYGR 111

Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
            +  +L  I + + E S +   S W   W + +P S+P LV  + ++        ++   
Sbjct: 112 LVEIALREIDKGVIEASVAMGASIWTIIWKVLIPESLPALVSGITVT-------TISLVG 164

Query: 213 IVVGDTVIPLPGIGSYI-ALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                 VI   G+G+       +   +  +  A + +L ++F    L
Sbjct: 165 YTAMAGVIGAGGLGNLAYLDGFQRNRMDVVFVATVIILIIVFTIQML 211



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 12/166 (7%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVS---CVSYYHLNPNLWLSLLMIFGTQWYILFN 467
              I+  +  F  +  + P  +   L++     +    L PN  L  L+I    +Y    
Sbjct: 54  NKWINRILSAFVNIFRSIPFVILIILLLPFTKWLVGSMLGPNAALPALIIGAAPFYGRL- 112

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V            E + +   + W     +++P   P  V+G           + ++ V 
Sbjct: 113 VEIALREIDKGVIEASVAMGASIWTIIWKVLIPESLPALVSGITVTTISLVGYTAMAGVI 172

Query: 528 SWGHIHLRTTGLGAYI-AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G       GLG     +  ++     V +  +I+   V  +   
Sbjct: 173 GAG-------GLGNLAYLDGFQRNRMDVVFVATVIILIIVFTIQML 211


>gi|227822498|ref|YP_002826470.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227341499|gb|ACP25717.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 674

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 65/541 (12%), Positives = 165/541 (30%), Gaps = 59/541 (10%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
            +P      + P +   +  + V+ +  +   G+    V  +   ++     + +L    
Sbjct: 116 RVPGGEPAWLLPFVLCAVLLLSVLPLARLAGAGVNGL-VDGEAARLIFAPATLAALRNTL 174

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFL------- 116
              T  M+ ++++  LF F  A    + + +     ++P++ I   +  L ++       
Sbjct: 175 LTATGGMVVSLILGSLFAFALALTDIRGKLILSFAFMLPMM-IPPQVTALAWVEMSGPAS 233

Query: 117 -TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRL 174
                +              L+ I  +   Q   + F ++   L   PRD  E +R    
Sbjct: 234 PLLKTLGLAPPLGSPQPLYSLSGIALLLGVQHAPLVFLALKAGLAASPRDGIEAARLAGA 293

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
              + F  + +P   PGL+    ++                      + G+G++      
Sbjct: 294 GPLRVFRDIVLPLGAPGLIAGGAIAF---------------------VSGVGNF------ 326

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
                  + A+L +   I     L+F  +  +        T G     S ++        
Sbjct: 327 ------GIPAILGIPAGIETLPTLIFSRLASFGAA-----TFGEIALISTLIAAISAAGL 375

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
           +          +  + ++  +   +LG  R         +      + +L +    +V  
Sbjct: 376 IVQQRALQGRDYRLIGHSGARAAFSLGRFRVAVEALLWAVLVLVLAAPLLALVASSLVPA 435

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-H 413
             + + + ++               +     ++F      +    + +P    +  R   
Sbjct: 436 YGVPLNFDTMSLDAYGEILFRQSITLTALKNSLFLASAAALGLLAVTVPAAYLLARRKGA 495

Query: 414 ISSKIQPFAQLLAAFP--ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN---- 467
           ++  +    ++  A P        ++        +  +L+ ++ +I    +         
Sbjct: 496 LAGLVAILIEIPYALPGIVLAVAFILTFAAPLPVVGVSLYGTIWIILAAYFSSFLAVSLK 555

Query: 468 -VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
            V++         +E A       +R  R ++LP + P      I     A N   VS +
Sbjct: 556 PVVSAMLQMDPALEEAARLAGAGFFRRMRDVLLPLVAPAAGASVILVFLIAANELTVSAL 615

Query: 527 A 527
            
Sbjct: 616 L 616


>gi|226953005|ref|ZP_03823469.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           sp. ATCC 27244]
 gi|226836326|gb|EEH68709.1| D-and L-methionine ABC transporter membrane protein [Acinetobacter
           sp. ATCC 27244]
          Length = 219

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           + +  + +++ L     A +           S+++   L  I++I +S+P L  +   ++
Sbjct: 18  IMVGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWIINITRSVPFLILM-VALI 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G   G  LAAI  +  + +         SL  + + L E +++   +  Q  W
Sbjct: 77  PFTRWIVGTSYGV-LAAIVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQILW 135

Query: 182 YLGVPFSMPGLVWNMMMSM 200
           Y+ +P ++PG+V    +++
Sbjct: 136 YVLLPEALPGIVAGFTVTI 154



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 38/137 (27%), Gaps = 14/137 (10%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPAN----VFFPLV 437
           V V  I+A +I +P+ + +             I+  +     +  + P         P  
Sbjct: 20  VGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWIINITRSVPFLILMVALIPFT 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              V   +      + L +     +  +               E A +      +   Y+
Sbjct: 80  RWIVGTSYGVLAAIVPLTIAAIPFFARI--AEVSLREVDQGLIEAAQAMGCNRKQILWYV 137

Query: 498 ILPGIFPYYVTGAITAC 514
           +LP   P  V G     
Sbjct: 138 LLPEALPGIVAGFTVTI 154


>gi|153831649|ref|ZP_01984316.1| phosphate ABC transporter, permease protein PstC [Vibrio harveyi
           HY01]
 gi|148872159|gb|EDL70976.1| phosphate ABC transporter, permease protein PstC [Vibrio harveyi
           HY01]
          Length = 322

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      
Sbjct: 44  KERIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVAT 102

Query: 72  MLSAMVISLLFTFVYA----------TLAAKSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A ++S     +                  +RL  ++ P ++++  IP + +    L 
Sbjct: 103 MIVASIVSTAGAVLVGVPVGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLV 162

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V    N++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 163 IIVPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKI 222

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 223 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 261



 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 8/131 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+ +       N  L   +++       
Sbjct: 135 KRLADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPT 194

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 195 VITVSETSIRAVPRTYKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMA 254

Query: 524 SEVASWGHIHL 534
             +       +
Sbjct: 255 IIMVMGNAPAM 265


>gi|29376306|ref|NP_815460.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227518945|ref|ZP_03948994.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227553565|ref|ZP_03983614.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229545631|ref|ZP_04434356.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229549822|ref|ZP_04438547.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255972549|ref|ZP_05423135.1| phosphate ABC transporter, permease [Enterococcus faecalis T1]
 gi|255975662|ref|ZP_05426248.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T2]
 gi|256619251|ref|ZP_05476097.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256762743|ref|ZP_05503323.1| peptide ABC transporter permease [Enterococcus faecalis T3]
 gi|256853311|ref|ZP_05558681.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256959164|ref|ZP_05563335.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256961741|ref|ZP_05565912.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|256964937|ref|ZP_05569108.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|257079201|ref|ZP_05573562.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|257082368|ref|ZP_05576729.1| phosphate ABC transporter, permease [Enterococcus faecalis E1Sol]
 gi|257084999|ref|ZP_05579360.1| phosphate ABC transporter, permease [Enterococcus faecalis Fly1]
 gi|257087042|ref|ZP_05581403.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|257090072|ref|ZP_05584433.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257416278|ref|ZP_05593272.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis AR01/DG]
 gi|257419479|ref|ZP_05596473.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257422376|ref|ZP_05599366.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|293383448|ref|ZP_06629361.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis R712]
 gi|293388898|ref|ZP_06633383.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis S613]
 gi|294779414|ref|ZP_06744815.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis PC1.1]
 gi|300860855|ref|ZP_07106942.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TUSoD Ef11]
 gi|307269569|ref|ZP_07550908.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX4248]
 gi|307273033|ref|ZP_07554279.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0855]
 gi|307275782|ref|ZP_07556921.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX2134]
 gi|307277879|ref|ZP_07558963.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0860]
 gi|307289296|ref|ZP_07569252.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0109]
 gi|307291805|ref|ZP_07571676.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0411]
 gi|312901838|ref|ZP_07761103.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0470]
 gi|312903506|ref|ZP_07762686.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0635]
 gi|312907723|ref|ZP_07766714.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis DAPTO 512]
 gi|312910341|ref|ZP_07769188.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis DAPTO 516]
 gi|312951687|ref|ZP_07770582.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0102]
 gi|29343769|gb|AAO81530.1| phosphate ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227073634|gb|EEI11597.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177295|gb|EEI58267.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229305091|gb|EEN71087.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229309199|gb|EEN75186.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|255963567|gb|EET96043.1| phosphate ABC transporter, permease [Enterococcus faecalis T1]
 gi|255968534|gb|EET99156.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T2]
 gi|256598778|gb|EEU17954.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ATCC 4200]
 gi|256683994|gb|EEU23689.1| peptide ABC transporter permease [Enterococcus faecalis T3]
 gi|256711770|gb|EEU26808.1| phosphate ABC transporter [Enterococcus faecalis T8]
 gi|256949660|gb|EEU66292.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis DS5]
 gi|256952237|gb|EEU68869.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis Merz96]
 gi|256955433|gb|EEU72065.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis HIP11704]
 gi|256987231|gb|EEU74533.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis JH1]
 gi|256990398|gb|EEU77700.1| phosphate ABC transporter, permease [Enterococcus faecalis E1Sol]
 gi|256993029|gb|EEU80331.1| phosphate ABC transporter, permease [Enterococcus faecalis Fly1]
 gi|256995072|gb|EEU82374.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis D6]
 gi|256998884|gb|EEU85404.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis CH188]
 gi|257158106|gb|EEU88066.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis ARO1/DG]
 gi|257161307|gb|EEU91267.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecalis T11]
 gi|257164200|gb|EEU94160.1| ABC phosphate transporter permease [Enterococcus faecalis X98]
 gi|291079239|gb|EFE16603.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis R712]
 gi|291081679|gb|EFE18642.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis S613]
 gi|294453543|gb|EFG21944.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis PC1.1]
 gi|295113131|emb|CBL31768.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Enterococcus sp. 7L76]
 gi|300849894|gb|EFK77644.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TUSoD Ef11]
 gi|306497071|gb|EFM66617.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0411]
 gi|306500005|gb|EFM69366.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0109]
 gi|306505276|gb|EFM74462.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0860]
 gi|306507474|gb|EFM76605.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX2134]
 gi|306510018|gb|EFM79042.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0855]
 gi|306514189|gb|EFM82765.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX4248]
 gi|310626751|gb|EFQ10034.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis DAPTO 512]
 gi|310630404|gb|EFQ13687.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0102]
 gi|310633382|gb|EFQ16665.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0635]
 gi|311289614|gb|EFQ68170.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis DAPTO 516]
 gi|311291031|gb|EFQ69587.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0470]
 gi|315027913|gb|EFT39845.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX2137]
 gi|315029510|gb|EFT41442.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX4000]
 gi|315031983|gb|EFT43915.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0017]
 gi|315037167|gb|EFT49099.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0027]
 gi|315144996|gb|EFT89012.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX2141]
 gi|315147453|gb|EFT91469.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX4244]
 gi|315149836|gb|EFT93852.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0012]
 gi|315156093|gb|EFU00110.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0043]
 gi|315158266|gb|EFU02283.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0312]
 gi|315162427|gb|EFU06444.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0645]
 gi|315163910|gb|EFU07927.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX1302]
 gi|315167282|gb|EFU11299.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX1341]
 gi|315169648|gb|EFU13665.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX1342]
 gi|315174815|gb|EFU18832.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX1346]
 gi|315576034|gb|EFU88225.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0309B]
 gi|315577798|gb|EFU89989.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0630]
 gi|315580609|gb|EFU92800.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0309A]
 gi|323480915|gb|ADX80354.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis 62]
 gi|327535321|gb|AEA94155.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
 gi|329571841|gb|EGG53519.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX1467]
          Length = 294

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 10/186 (5%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++  +L   +I IL  GI   +    +            +      +   +L  M+IS+
Sbjct: 19  GVIVLILAALLIYILARGIPHISWEF-LTQPSRAYQVGGGIGIQLFNSLYLLLITMIISI 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAE 135
             +          AK   L  ++   ++I+ S+P  ++G   F +      Y   ++   
Sbjct: 78  PISLGAGIYLSEYAKKNWLTDLIRTSIEILSSLPSVVVGLFGFLIFVVQIGYGFSILSGA 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA  F         +T ++ +SL  I     E   +  LS W+    + +P ++PG++  
Sbjct: 138 LALTFFNLPL----LTRNVEESLKAIHYTQREAGLALGLSRWETVKKVILPEALPGILTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 VILSSG 199



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      V+  +   +    +   + H ++           V     I +F  + 
Sbjct: 8   KIATGILYAVSGVIVLILAALLIYILARGIPHISWEFLTQPSRAYQVGGGIGIQLFNSLY 67

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSY 443
           L++I  II IP+ +  G           ++  I+   ++L++ P+ V   F  ++  V  
Sbjct: 68  LLLITMIISIPISLGAGIYLSEYAKKNWLTDLIRTSIEILSSLPSVVVGLFGFLIFVVQI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    L  +L + F     +  NV     A     +E   +  ++ W   + +ILP   
Sbjct: 128 GYGFSILSGALALTFFNLPLLTRNVEESLKAIHYTQREAGLALGLSRWETVKKVILPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I + G  + 
Sbjct: 188 PGILTGVILSSGRIFG 203


>gi|226357626|ref|YP_002787366.1| sugar ABC transporter, permease component [Deinococcus deserti
           VCD115]
 gi|226319617|gb|ACO47612.1| putative sugar ABC transporter, permease component [Deinococcus
           deserti VCD115]
          Length = 273

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 7/198 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + +  L+A VI ++     A   A+ +     L   + + + IP + FL    + F  L 
Sbjct: 74  SLIVALAATVIGMVLGLPAAYSIARFK--QRGLSLWILVSRIIPYITFLLPLFLVFTKL- 130

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +IG+  A I +     +  + +       +IP DLEE +     S    F  + +P 
Sbjct: 131 --NLIGSFTALIASHLIITLPLIVWITIAFFEDIPTDLEEAALVDGSSRAGAFVRIILPL 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             PG++   +++M   W   + S +I+ G     +P +  +  L+   QD  AI  A + 
Sbjct: 189 VAPGVITAGILAMIFSWNQFLFS-LILGGPNTKTVP-VAVFNFLSYGSQDYGAIAAAAVL 246

Query: 248 MLGVIFLYDQLLFRPMIV 265
           +   I L    + R ++ 
Sbjct: 247 ITLPIILLSLTVQRYIVK 264



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 3/190 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++   +   +I  ++ +P    I         +      +  +      PL +       
Sbjct: 74  SLIVALAATVIGMVLGLPAAYSIARFKQRGLSLWILVSRIIPY-ITFLLPLFLVFTKLNL 132

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     L    +  T   I++  IA     P D +E A     +    +  IILP + P 
Sbjct: 133 IGSFTALIASHLIITLPLIVWITIAFFEDIPTDLEEAALVDGSSRAGAFVRIILPLVAPG 192

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            +T  I A   +WN  + S +    +       +  +++  ++   +  +    +++   
Sbjct: 193 VITAGILAMIFSWNQFLFSLILGGPNTKTVPVAVFNFLSYGSQ--DYGAIAAAAVLITLP 250

Query: 566 VLALNRFLWH 575
           ++ L+  +  
Sbjct: 251 IILLSLTVQR 260


>gi|221210211|ref|ZP_03583191.1| methionine import ATP-binding protein MetN 2 [Burkholderia
           multivorans CGD1]
 gi|221169167|gb|EEE01634.1| methionine import ATP-binding protein MetN 2 [Burkholderia
           multivorans CGD1]
          Length = 607

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 20/220 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILD 105
             L    L      T   + ++  I+ L     A +   +        R +  VL  +++
Sbjct: 391 FELWWPELLDAIRDTLSMVAASAAIAALLGIPLAVVLVTTAPGGIYERRAVNAVLGALVN 450

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S P    L   ++ F  +  G  IG   AA+  +  + +         SL  + R L
Sbjct: 451 VFRSTP-FIILLVALLPFTRVLIGTTIGV-WAAVVPLSIAAIPFFARIAEVSLREVDRGL 508

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +         W++ +P ++PG++    +++      ++ S  +        L  +
Sbjct: 509 IEAALAMGAKRRHIVWHVLLPEALPGMLGGFTITV----VALIGSTAMAGAVGAGGLGDL 564

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLY----DQLLFR 261
              I    +  D   +   ++ ++ ++       D+L+ R
Sbjct: 565 --AIRYGYQRFDTAVMATVIVILIALVSAVQFTGDRLVRR 602



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 68/228 (29%), Gaps = 26/228 (11%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPF 421
              + ++L  I     T+  V     IA+++ IP+ + +          R  +++ +   
Sbjct: 392 ELWWPELLDAIRD---TLSMVAASAAIAALLGIPLAVVLVTTAPGGIYERRAVNAVLGAL 448

Query: 422 AQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFP 476
             +  + P         P     +        +W +++ +          +         
Sbjct: 449 VNVFRSTPFIILLVALLPFTRVLIG---TTIGVWAAVVPLSIAAIPFFARIAEVSLREVD 505

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A +          +++LP   P  + G          A I S   +        
Sbjct: 506 RGLIEAALAMGAKRRHIVWHVLLPEALPGMLGGFTITV----VALIGSTAMAGAVGAGGL 561

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
             L   I    ++     V+  V+++   +++  +F    L    TR 
Sbjct: 562 GDL--AIRYGYQRFDTA-VMATVIVILIALVSAVQFTGDRLVRRVTRR 606


>gi|72160687|ref|YP_288344.1| polyamine ABC-transporter, inner membrane subunit [Thermobifida
           fusca YX]
 gi|71914419|gb|AAZ54321.1| polyamine ABC-transporter, inner membrane subunit [Thermobifida
           fusca YX]
          Length = 274

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 9/187 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+      ++IA I    +G+ +G       +      + AA  A            +  
Sbjct: 82  TLLIGFATMLIAGITGTLLGLAMGRYRFRGQQASNLV-MFAAISAPEVVIGASLLSLFIA 140

Query: 446 LNPNLWLSLLMIFGTQWYI---LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           LN  L ++ ++I    + I      V A         +E A       W  +R +  P +
Sbjct: 141 LNLTLGMTTVIIAHVMFSISFVAITVRARVMTMDPSIEEAARDLGADSWTTFRLVTFPML 200

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562
           FP  + G + A   + +  I++   S             +I  ST  G  P+V +   ++
Sbjct: 201 FPAIMAGGLLAFALSVDDFIITSFVSGDLTTFPL-----WIWGSTRVGIPPQVNVMGTLI 255

Query: 563 CCFVLAL 569
               + L
Sbjct: 256 FVVGVLL 262



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 63/195 (32%), Gaps = 7/195 (3%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L Q    T L   + M+I+ +   +      + R  G      L +  +I     +    
Sbjct: 75  LNQALFNTLLIGFATMLIAGITGTLLGLAMGRYRFRGQQ-ASNLVMFAAISAPEVVIGAS 133

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +  + +     +G     I  +  S  + +  ++   +  +   +EE +R      W  F
Sbjct: 134 LLSLFIALNLTLGMTTVIIAHVMFSISF-VAITVRARVMTMDPSIEEAARDLGADSWTTF 192

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             +  P   P ++   +++ +      + +  +    T  PL     +I  + +      
Sbjct: 193 RLVTFPMLFPAIMAGGLLAFALSVDDFIITSFVSGDLTTFPL-----WIWGSTRVGIPPQ 247

Query: 241 ILYAMLTMLGVIFLY 255
           +      +  V  L 
Sbjct: 248 VNVMGTLIFVVGVLL 262


>gi|329945991|ref|ZP_08293678.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328528439|gb|EGF55417.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 245

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 71/200 (35%), Gaps = 12/200 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           +  +     L+ + A++ + +     A LA  +R L  VLV    ++ ++P L       
Sbjct: 11  IAGHLLAHLLQAVPAILAAFVLAIPIARLARAARPLRAVLVTGSSLLYAVPSLALFVILP 70

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           +                 I A+    +  +  +   +L  +   + + + +  +  ++ F
Sbjct: 71  IILATGIRDPFN-----VIVALTLYGLALLVPATADALDAVDGRVLDAATAMGMGRFRCF 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P + P ++  + +         V++  +     V+ +  +G       +      
Sbjct: 126 LTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRGITAE 178

Query: 241 ILYAMLTMLGVIFLYDQLLF 260
           I+  ++    +  + D ++ 
Sbjct: 179 IVTGLVATAVLALVLDGIIL 198



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 74/201 (36%), Gaps = 8/201 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  +       + + V  I+ A ++ IP+         + + +   + LL A P+  
Sbjct: 5   LANLPVIAGHLLAHLLQAVPAILAAFVLAIPIARLARAARPLRAVLVTGSSLLYAVPSLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F ++   ++    +P   +  L ++G    ++        A      + A++  +  +R
Sbjct: 65  LFVILPIILATGIRDPFNVIVALTLYGLA-LLVPATADALDAVDGRVLDAATAMGMGRFR 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P  +TG           ++ +   +     L    LG    +  ++G  
Sbjct: 124 CFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRGIT 176

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            E+V G++      L L+  +
Sbjct: 177 AEIVTGLVATAVLALVLDGII 197


>gi|310814673|ref|YP_003962637.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
 gi|308753408|gb|ADO41337.1| Binding-protein-dependent transport systems inner membrane
           component [Ketogulonicigenium vulgare Y25]
          Length = 259

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 82/252 (32%), Gaps = 15/252 (5%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           ++ P I  ++ F     +I               ++  +    +   L + A+ + + + 
Sbjct: 6   KLLPGILGIVIFAAGWELIGQYRLAGLTWPPLSTVLGFLGNPANHALLQRAATASFVAVG 65

Query: 74  SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
              V  +   F  A L    R     +   + ++ + P +      +V          I 
Sbjct: 66  LGYVFGVGIGFALAALVRVWRVTRPGIDRFVALIHATPGIALAPVFMVLLQRDQIPVAIA 125

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           A          +  + +  +    L    R   ++          +F+ L +P ++P +V
Sbjct: 126 A---------LAVFYLVYVATTSGLEAAHRAHHDLFSVLGAKPQTRFFRLEIPAALPAIV 176

Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253
             + +++   +   +  E            G+G  +  A++   +  +  A L  + +++
Sbjct: 177 SGLKLAVPVAFMGGIVGEWFGAS------RGLGLLMISAMQNFQIPLLWSAGLLGIPLLW 230

Query: 254 LYDQLLFRPMIV 265
               L+  P + 
Sbjct: 231 SAVLLVMVPSLA 242



 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 63/230 (27%), Gaps = 12/230 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMF 388
              +L        +    W  +      G+ W  +  ++       +   +      +  
Sbjct: 3   RLTKLLPGILGIVIFAAGWELIGQYRLAGLTWPPLSTVLGFLGNPANHALLQRAATASFV 62

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
            V +  +    I   +   +         I  F  L+ A P     P+ +  +    +  
Sbjct: 63  AVGLGYVFGVGIGFALAALVRVWRVTRPGIDRFVALIHATPGIALAPVFMVLLQRDQIPV 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +           + +     +G  A      ++ S         +  + +P   P  V+
Sbjct: 123 AIAA-----LAVFYLVYVATTSGLEAAHRAHHDLFSVLGAKPQTRFFRLEIPAALPAIVS 177

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
           G   A   A+   IV E          + GLG  +  + +    P +   
Sbjct: 178 GLKLAVPVAFMGGIVGEWFG------ASRGLGLLMISAMQNFQIPLLWSA 221


>gi|308176859|ref|YP_003916265.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter inner membrane subunit [Arthrobacter
           arilaitensis Re117]
 gi|307744322|emb|CBT75294.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC
           transporter, inner membrane subunit [Arthrobacter
           arilaitensis Re117]
          Length = 224

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 67/175 (38%), Gaps = 12/175 (6%)

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
           A++I    +     +A + + +   LV +  ++ +IP L  L       + +  G    +
Sbjct: 21  AILIGFALSIPLGWVAWRYKLVRGPLVTLTGLLYTIPSLALLMI-----LPVITGMSAIS 75

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
           E   + A+    V  M   +   L ++       + +      ++F+ + +P + P ++ 
Sbjct: 76  EANLVVALSIYAVAIMVRGVVDGLNSVDPATRSAATAMGYGPARRFFAVDLPLAGPVILA 135

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
            + ++        V++  +     ++ +  +G      ++ + +  +   +L + 
Sbjct: 136 GLRVT-------AVSTISLATVGILVGVTNLGYLFTNGLQRRIIAEVFAGILAVA 183



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 8/173 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + I+I   + IP+G        +   +     LL   P+     ++        ++   
Sbjct: 19  AMAILIGFALSIPLGWVAWRYKLVRGPLVTLTGLLYTIPSLALLMILPVITGMSAISEAN 78

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L I+     ++  V+ G ++     +  A++      R +  + LP   P  + G 
Sbjct: 79  LVVALSIYAVA-IMVRGVVDGLNSVDPATRSAATAMGYGPARRFFAVDLPLAGPVILAGL 137

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                      + +   +   I +  T LG       ++    EV  G+L + 
Sbjct: 138 RVTA-------VSTISLATVGILVGVTNLGYLFTNGLQRRIIAEVFAGILAVA 183


>gi|303258015|ref|ZP_07344024.1| phosphate ABC transporter, permease protein PstA [Burkholderiales
           bacterium 1_1_47]
 gi|330999430|ref|ZP_08323144.1| phosphate ABC transporter, permease protein PstA [Parasutterella
           excrementihominis YIT 11859]
 gi|302859358|gb|EFL82440.1| phosphate ABC transporter, permease protein PstA [Burkholderiales
           bacterium 1_1_47]
 gi|329574856|gb|EGG56415.1| phosphate ABC transporter, permease protein PstA [Parasutterella
           excrementihominis YIT 11859]
          Length = 290

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +   L +  +  + +    T  P  +       ++   +      T +  + AM ++L 
Sbjct: 27  WIMVALFLSSLGYIAYHGAGTLSPSFLSTFPEKMMEEGGILPCIIGTAILSIGAMAVALP 86

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK   L  ++   +  +  +P + F  F + +F+ +    V  + +A 
Sbjct: 87  LGIACAVWLNEYAKEGPLKKLITLAVANLAGVPSIVFGLFGLAFFVTVCGLGV--SAIAG 144

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +    +  +  ++ ++L  IP    E S +   S  Q      +P ++PG++   ++
Sbjct: 145 ILTLAVLTLPIVINTVRETLSQIPNSWRESSLALGASKTQTVLRTVLPAALPGILTGAIL 204

Query: 199 SMSGG 203
            ++  
Sbjct: 205 GLARA 209



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
                  +       IA+   G +   F  T+ + +         +    +L I A  + 
Sbjct: 25  GAWIMVALFLSSLGYIAYHGAGTLSPSFLSTFPEKMMEEGGILPCIIGTAILSIGAMAVA 84

Query: 402 IPVGIWIGFRPHISSKIQPFAQL-------LAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453
           +P+GI      +  +K  P  +L       LA  P+ VF    ++       L  +    
Sbjct: 85  LPLGIACAVWLNEYAKEGPLKKLITLAVANLAGVPSIVFGLFGLAFFVTVCGLGVSAIAG 144

Query: 454 LLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L +      I+ N +    S  PN ++E + +   +  +     +LP   P  +TGAI 
Sbjct: 145 ILTLAVLTLPIVINTVRETLSQIPNSWRESSLALGASKTQTVLRTVLPAALPGILTGAIL 204

Query: 513 ACGGA 517
               A
Sbjct: 205 GLARA 209


>gi|297155863|gb|ADI05575.1| ABC transporter permease protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 252

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 9/163 (5%)

Query: 96  LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155
           +  V+  I++I +S+P    L   ++ F     G  IG E AAI  +    +      + 
Sbjct: 53  VNKVVGQIVNIGRSMP-FIILMVALISFTRWIVGTSIGPE-AAIVPLAIGAIPFFARLVE 110

Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            S+  +   L E  +S   S W     + +P ++P L       +S     +VA      
Sbjct: 111 TSVREVDGGLVEAVQSMGGSTWTVVRKVLLPEALPSL-------ISSATTTIVALIGYSA 163

Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
               +   G+G        ++    +++  + +L V+    Q 
Sbjct: 164 MAGTVGAGGLGDLAIRYGYQRFETELMWITVAILAVVISIIQF 206



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 11/165 (6%)

Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVS---CVSYYHLNPNLWLSLLMIFGTQWYILFN 467
              ++  +     +  + P  +    ++S    +    + P   +  L I G   +    
Sbjct: 50  NVVVNKVVGQIVNIGRSMPFIILMVALISFTRWIVGTSIGPEAAIVPLAI-GAIPFFARL 108

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
           V            E   S   + W   R ++LP   P  ++ A T        S ++   
Sbjct: 109 VETSVREVDGGLVEAVQSMGGSTWTVVRKVLLPEALPSLISSATTTIVALIGYSAMAGTV 168

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G       GLG        +    E++   + +   V+++ +F
Sbjct: 169 GAG-------GLGDLAIRYGYQRFETELMWITVAILAVVISIIQF 206


>gi|297155609|gb|ADI05321.1| binding-protein dependent transport protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 321

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 78/260 (30%), Gaps = 17/260 (6%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY---MLDIFWFCVVC---------- 353
           +P     ++  R         P   + L     +     ++ + W  +            
Sbjct: 22  APRLRTPRRNARNARTADSRRPRRSVLLTVLTGLVLVYSLVPLIWLVISSTKTQEGLASS 81

Query: 354 -GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
            G+     +     +   FTY D ++V WL   T+  V +    A+ + +  G  +    
Sbjct: 82  SGLWFADHFALWDNVRETFTYNDGVFVRWL-LNTLLYVGLGAGGATFLAVLGGYALAKFT 140

Query: 413 H-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
                 +        A P            S   L    W  ++    + + +    +  
Sbjct: 141 FPGKRAVFAVVIGAVAVPTTALAVPTFLMFSKMGLTNTPWAVIIPSLISPFGLYLMWVFA 200

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWG 530
             A P +  E A        R +  + LP + P  VT  +      W N  +   +    
Sbjct: 201 TEAIPTELLEAARIDGAGELRTFFRVSLPLLAPGIVTVLLFTMVATWNNYFLPLIMLKDP 260

Query: 531 HIHLRTTGLGAYIAESTEKG 550
             +  T GL ++ A++   G
Sbjct: 261 DWYPLTLGLNSWNAQAQTAG 280



 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   T L +      +     +     AK        +  ++    ++P       T +
Sbjct: 109 RWLLNTLLYVGLGAGGATFLAVLGGYALAKFTFPGKRAVFAVVIGAVAVPTTALAVPTFL 168

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  +           A+        + +      +   IP +L E +R       + F+
Sbjct: 169 MFSKMGLTNTP----WAVIIPSLISPFGLYLMWVFATEAIPTELLEAARIDGAGELRTFF 224

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            + +P   PG+V  ++ +M   W 
Sbjct: 225 RVSLPLLAPGIVTVLLFTMVATWN 248


>gi|293603474|ref|ZP_06685898.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292818116|gb|EFF77173.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 217

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T L +  A  I+++                  +++ +  VL  I++  +S+P 
Sbjct: 9   LITSLLDTLLMVGVASAIAVVVGIPLGVTLTVTARGNMLENQPVNHVLGAIINATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L     IG   AAI  +  + +  M      ++  +   L   +R+ 
Sbjct: 68  FVILMVAIIPFTRLVAQTSIGTT-AAIVPLSVAAIPFMARIAENAMREVDPGLITAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PGL+   ++++
Sbjct: 127 GASPMQIILKVLLPEALPGLIAATIVTV 154



 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 12/155 (7%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFA 422
            + Q +  +I     T+  V V   IA ++ IP+G+ +             ++  +    
Sbjct: 1   MSPQLIDLLITSLLDTLLMVGVASAIAVVVGIPLGVTLTVTARGNMLENQPVNHVLGAII 60

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG---ASAFPNDF 479
               + P  +   + +   +      ++  +  ++  +   I F                
Sbjct: 61  NATRSVPFVILM-VAIIPFTRLVAQTSIGTTAAIVPLSVAAIPFMARIAENAMREVDPGL 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              A +   +  +    ++LP   P  +   I   
Sbjct: 120 ITAARAMGASPMQIILKVLLPEALPGLIAATIVTV 154


>gi|229085798|ref|ZP_04218026.1| Binding-protein-dependent transport system inner membrane component
           [Bacillus cereus Rock3-44]
 gi|228697597|gb|EEL50354.1| Binding-protein-dependent transport system inner membrane component
           [Bacillus cereus Rock3-44]
          Length = 270

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 4/151 (2%)

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVW---NMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
           ++  + +     +     ++FAI  + +W    M       L +IP+DL E +     S 
Sbjct: 108 LLSLIGINGPNWLNDPTWSLFAIVFAGIWGQGTMMLIFLAGLKSIPKDLYEAADIDGASK 167

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL-AIKE 235
           W KF  + +P   P +++N++ ++   +  +  + ++  G  +        Y+   A K 
Sbjct: 168 WHKFSKITLPMLSPSILFNVITAIISAFQQLTLALVLTGGGPLRKTYFYAMYVYENAFKY 227

Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
             +         M  +I     L+F+    W
Sbjct: 228 FKMGYASANAWFMFLIILALTLLVFKTSNTW 258



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 446 LNPNLWLSLLMIFGTQW---YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           LN   W    ++F   W    ++   +AG  + P D  E A     + W  +  I LP +
Sbjct: 120 LNDPTWSLFAIVFAGIWGQGTMMLIFLAGLKSIPKDLYEAADIDGASKWHKFSKITLPML 179

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGH 531
            P  +   ITA   A+    ++ V + G 
Sbjct: 180 SPSILFNVITAIISAFQQLTLALVLTGGG 208


>gi|239624452|ref|ZP_04667483.1| phosphate ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239520838|gb|EEQ60704.1| phosphate ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 313

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 64/182 (35%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            + +L+ GI+  +            +      T     +      T   +   ++I+   
Sbjct: 53  FSILLLAGIMGYVFVRGIPHVTWSFLSTASSATKGTFGILGNIINTLYIVAITLLIATPI 112

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      A+  ++  ++    + +  IP + F  F +V+F N           A  
Sbjct: 113 GIGSAVYLNEYARPGKVVRLIEFTTETLSGIPSIIFGLFGMVFFGNTLGLGYSILTGALT 172

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P      +     + W     + +P +MPG++  ++++
Sbjct: 173 LTLMILPL--ITRTTQEALKTVPDSYRHGALGIGATKWYMIRTILLPSAMPGILTGVILA 230

Query: 200 MS 201
           + 
Sbjct: 231 IG 232



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 74/250 (29%), Gaps = 25/250 (10%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
               R       H      ++ S+  +   +          +  GI        + H T+
Sbjct: 16  DMAVRANRRSTLHESIYGRRVRSSDVILTGVIYGCAAFSILLLAGIMGYVFVRGIPHVTW 75

Query: 374 Q----------DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH---ISSKIQP 420
                          ++     T++ V + ++IA+ I I   +++        +   I+ 
Sbjct: 76  SFLSTASSATKGTFGILGNIINTLYIVAITLLIATPIGIGSAVYLNEYARPGKVVRLIEF 135

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-------NVIAGAS 473
             + L+  P+ +F                L L   ++ G     L               
Sbjct: 136 TTETLSGIPSIIF-----GLFGMVFFGNTLGLGYSILTGALTLTLMILPLITRTTQEALK 190

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P+ ++  A     T W   R I+LP   P  +TG I A G     S      +    +
Sbjct: 191 TVPDSYRHGALGIGATKWYMIRTILLPSAMPGILTGVILAIGRIVGESAALLFTAGSGYY 250

Query: 534 LRTTGLGAYI 543
           L    LG  +
Sbjct: 251 LPKNLLGKIL 260


>gi|91201119|emb|CAJ74178.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 533

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 18/154 (11%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T + +    +  +    + A      A    +  ++   ++ +  +P + F  F + +F+
Sbjct: 288 TVMMVFIMSIAVVPLGVLTAVYLKEYAGDNFISRIVRISVNNLAGVPSIVFGVFGLGFFI 347

Query: 125 NLYPGKVIGAELAAIFAIFTS---------------QVWNMTFSMYQSLCNIPRDLEEVS 169
            L  G +      +     T                 V  +  S  + L ++P  + E S
Sbjct: 348 YLIGGTIDNVFFKSALPSPTFGTGGILWAALTLALLTVPVVVVSTEEGLSSVPGSIREGS 407

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +   + ++  W + +P + PG++   +++M+  
Sbjct: 408 YALGATKFETLWRVVLPQAAPGILTGTILAMARA 441



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 26/157 (16%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF----FP 435
           +F  V+++ I SI  +P+G+              IS  ++     LA  P+ VF      
Sbjct: 285 IFGTVMMVFIMSIAVVPLGVLTAVYLKEYAGDNFISRIVRISVNNLAGVPSIVFGVFGLG 344

Query: 436 LVVSCVSYYHLNPNLWLS-LLMIFGT--------------QWYILFNVIAGASAFPNDFK 480
             +  +     N     +     FGT                 ++ +   G S+ P   +
Sbjct: 345 FFIYLIGGTIDNVFFKSALPSPTFGTGGILWAALTLALLTVPVVVVSTEEGLSSVPGSIR 404

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E + +   T +     ++LP   P  +TG I A   A
Sbjct: 405 EGSYALGATKFETLWRVVLPQAAPGILTGTILAMARA 441


>gi|152965083|ref|YP_001360867.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151359600|gb|ABS02603.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 280

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 3/194 (1%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A +I+++     A   A+    G  +  +L    ++ +   +T     F       + 
Sbjct: 80  LIATLIAVVLAMFAAYAIARLNFPGKRV--VLTSALAVAVFPVITMVTPLFNLWRRVGLY 137

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 I       +    ++M      IP D+E+ ++    + WQ F  + VP + PG+
Sbjct: 138 DTIPGLIIPYLALTLPISIWTMSAFFRGIPWDMEQAAQVDGATSWQAFRKVIVPLAAPGV 197

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDLLAILYAMLTMLGV 251
               +++    W   V    +       P+P  + S+   +   Q   AI  A + +   
Sbjct: 198 FTTAIIAFFIAWNDFVFGISLTSTSRAQPVPAALSSFTGSSYFVQPTGAISAAAVIVTIP 257

Query: 252 IFLYDQLLFRPMIV 265
           + L   +  R ++ 
Sbjct: 258 VVLLALVFQRRIVA 271



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 13/202 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY- 444
           ++   ++  +IA ++ +     I        ++     +L +  A   FP++      + 
Sbjct: 75  SVITCLIATLIAVVLAMFAAYAIARLNFPGKRV-----VLTSALAVAVFPVITMVTPLFN 129

Query: 445 -----HLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYII 498
                 L   +   ++        I    ++      P D ++ A     T W+ +R +I
Sbjct: 130 LWRRVGLYDTIPGLIIPYLALTLPISIWTMSAFFRGIPWDMEQAAQVDGATSWQAFRKVI 189

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVL 557
           +P   P   T AI A   AWN  +     +           L ++   S        +  
Sbjct: 190 VPLAAPGVFTTAIIAFFIAWNDFVFGISLTSTSRAQPVPAALSSFTGSSYFVQPTGAISA 249

Query: 558 GVLIMCCFVLALNRFLWHPLYL 579
             +I+   V+ L       +  
Sbjct: 250 AAVIVTIPVVLLALVFQRRIVA 271


>gi|298250603|ref|ZP_06974407.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
 gi|297548607|gb|EFH82474.1| binding-protein-dependent transport systems inner membrane
           component [Ktedonobacter racemifer DSM 44963]
          Length = 288

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTF 118
           SL Q  S + +    A VI++      A +  + + R  ++ +  L  +Q++P +  L  
Sbjct: 68  SLAQGMSNSLIISGIASVIAVALAVGAAYVITRFKFRGRLIYLYSLIGLQTVPGVMLLLP 127

Query: 119 TVVYF---MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175
             V F     L   K++G   A I    T  +   T+ M   L +IP DLEE +     +
Sbjct: 128 IFVLFSSIQALLHLKLVGTYPAVIITDLTFALPFATWLMVSYLGSIPVDLEEAALVDGAT 187

Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             Q  W + VP ++PG+V  ++ S   GW  V+ + ++ 
Sbjct: 188 RLQALWRVIVPLALPGMVVALVFSFLAGWNDVLFASVLT 226



 Score = 38.8 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 11/201 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL-LAAFP-ANVFFPLVVSCVSY 443
           ++    +  +IA  + +     I         I  ++ + L   P   +  P+ V   S 
Sbjct: 76  SLIISGIASVIAVALAVGAAYVITRFKFRGRLIYLYSLIGLQTVPGVMLLLPIFVLFSSI 135

Query: 444 ---YHLNPNLWLSLLMIFGTQWYILFNVIAGAS---AFPNDFKEVASSFHITGWRWWRYI 497
               HL        ++I    + + F      S   + P D +E A     T  +    +
Sbjct: 136 QALLHLKLVGTYPAVIITDLTFALPFATWLMVSYLGSIPVDLEEAALVDGATRLQALWRV 195

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE--V 555
           I+P   P  V   + +    WN  + + V +          L A+ + + E G+ P    
Sbjct: 196 IVPLALPGMVVALVFSFLAGWNDVLFASVLTSPETRTIAVQLQAF-SSAQEGGALPLYGQ 254

Query: 556 VLGVLIMCCFVLALNRFLWHP 576
           ++G  I+    + +   ++  
Sbjct: 255 LMGAAIVSALPVVILYMVFQR 275


>gi|159037253|ref|YP_001536506.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
 gi|157916088|gb|ABV97515.1| binding-protein-dependent transport systems inner membrane
           component [Salinispora arenicola CNS-205]
          Length = 242

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 66/211 (31%), Gaps = 11/211 (5%)

Query: 72  MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           +L ++ ++ +   + A    ++         +   + +IP    L   +      Y    
Sbjct: 25  VLMSVALATVIAVLIALATYRNPSARATATGMAAALLTIPSFALLGLLITPLGLGYTP-- 82

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                  + A+    +  +  +    L  I   L E +R   +   +    + +P + P 
Sbjct: 83  ------TLVALTMYALLPILRNTIVGLTEIDPALTEAARGIGMGRVRSLATVEIPLAWPV 136

Query: 192 LVWNMMMS-MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           ++  + +S         +A+ +   G       G+ +     +   +   +    + +L 
Sbjct: 137 ILAGIRVSTQMTMGIAAIAAYVDGPGLGHQIFSGLANL--GGVNSLNQALVGTVGVIVLA 194

Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281
           V+F     L   +     + +L R       
Sbjct: 195 VVFDLALALLGRLTRAGERPKLFRARPARRP 225



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 64/185 (34%), Gaps = 15/185 (8%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V++ + +A++I + + +     P   +     A  L   P+     L+++ +   +    
Sbjct: 25  VLMSVALATVIAVLIALATYRNPSARATATGMAAALLTIPSFALLGLLITPLGLGYTPTL 84

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           + L++  +      IL N I G +       E A    +   R    + +P  +P  + G
Sbjct: 85  VALTMYALL----PILRNTIVGLTEIDPALTEAARGIGMGRVRSLATVEIPLAWPVILAG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPEVVLGVLIMCCF 565
              +       + ++             GLG  I    A      S  + ++G + +   
Sbjct: 141 IRVSTQMTMGIAAIAAYVDG-------PGLGHQIFSGLANLGGVNSLNQALVGTVGVIVL 193

Query: 566 VLALN 570
            +  +
Sbjct: 194 AVVFD 198


>gi|87304012|ref|ZP_01086623.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           WH 5701]
 gi|87281540|gb|EAQ73573.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           WH 5701]
          Length = 321

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 95/278 (34%), Gaps = 37/278 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++  I+ ++  G   + +      ++    +       A       L   ++SL  
Sbjct: 40  VVALVLFAILFVVFQGGLPSMLRYGWEFLITSDWNPVDDEYGAGAAIYGTLVTSILSLFI 99

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILG---FLTFTVVYFM-------- 124
                   A         +++   +  +++++ ++P +    +  F +  F+        
Sbjct: 100 AIPLGVGTAIFITENIIPQKIRNFIGLMVELLAAVPSVVLGLWAIFVMEPFIRPGLEMLY 159

Query: 125 ------NLYPGKVIGAELAAIFAIFTSQVWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGW 177
                  L+    +G        I    +  +  +    SL  +P  L + +     + W
Sbjct: 160 TYFGWIPLFSSPPMGPGTLPAVLILVVMILPIITAITRDSLQQVPERLTQAAYGIGTTRW 219

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPG--IGSYIAL 231
                + +P ++ G+V  +M+++       +A  MI+            PG  I + +A 
Sbjct: 220 GAITNVTLPAAISGIVGGVMLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAMLAN 279

Query: 232 AIKEQD------LLAILYAMLTMLGVIFLYDQLLFRPM 263
              E D      L+   + ++ M   + +  QLL + +
Sbjct: 280 QFGEADGSQVSSLMYAAFVLMIMTLAVNILAQLLVKRL 317



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 96/321 (29%), Gaps = 41/321 (12%)

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
               +S+N+    R     +     +         ++ ++ +  F ++  V  G     +
Sbjct: 2   ILRSMSSNLDDQYRLRKRPQSEKLVDSGFKNLAVILASVVALVLFAILFVVFQGGLPSML 61

Query: 365 GYIVNHFTYQDVLYVI--WLGCITMFRVVVLIIIASIIWIPVGIWIGFR-------PHIS 415
            Y        D   V   +     ++  +V  I++  I IP+G+              I 
Sbjct: 62  RYGWEFLITSDWNPVDDEYGAGAAIYGTLVTSILSLFIAIPLGVGTAIFITENIIPQKIR 121

Query: 416 SKIQPFAQLLAAFPANV-------------------------FFPLVVSCVSYYHLNPNL 450
           + I    +LLAA P+ V                         + PL  S        P +
Sbjct: 122 NFIGLMVELLAAVPSVVLGLWAIFVMEPFIRPGLEMLYTYFGWIPLFSSPPMGPGTLPAV 181

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + ++MI      I           P    + A     T W     + LP      V G 
Sbjct: 182 LILVVMILPIITAI---TRDSLQQVPERLTQAAYGIGTTRWGAITNVTLPAAISGIVGGV 238

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGL--GAYI--AESTEKGSFPEVVLGVLIMCCFV 566
           + A G A   ++   +      +   + L  G  I    + + G      +  L+   FV
Sbjct: 239 MLALGRAMGETMAVTMIIGNSNNFSFSLLAPGNTISAMLANQFGEADGSQVSSLMYAAFV 298

Query: 567 LALNRFLWHPLYLYGTRCLRL 587
           L +     + L     + L L
Sbjct: 299 LMIMTLAVNILAQLLVKRLSL 319


>gi|312887131|ref|ZP_07746735.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311300443|gb|EFQ77508.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 281

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+ F L+  + +++  G    +                 LP     T L  L   +I+ 
Sbjct: 19  GLVCFFLLAILWDLISKGSSSLSWAFISTSPTDGMTKGGILPAIIG-TVLLTLITALIAA 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F    A      A    L  ++   +  +  +P + +  F +  F+     ++  + LA
Sbjct: 78  PFGICCAIYLNEYATDSWLTRIIRASIRNLAGVPSIIYGLFGLALFVQGL--QMGTSLLA 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  +  +  ++L  +P  + E + +   + ++    + +P ++PG++  ++
Sbjct: 136 AGLTLGLLSLPYIIITTEEALRRVPNSMREAALAVGATQFESIRDVVLPSAVPGMLTGLV 195

Query: 198 MSMSGG 203
           +++S  
Sbjct: 196 LTLSRA 201



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 15/193 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVL 393
           + +   +    +VC   + I W  I    +  ++  +      G         +   V+L
Sbjct: 9   IEWGTLLLTTGLVCFFLLAILWDLISKGSSSLSWAFISTSPTDGMTKGGILPAIIGTVLL 68

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYY 444
            +I ++I  P GI              ++  I+   + LA  P+ ++  F L +      
Sbjct: 69  TLITALIAAPFGICCAIYLNEYATDSWLTRIIRASIRNLAGVPSIIYGLFGLALFVQGLQ 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                L   L +   +  YI+          PN  +E A +   T +   R ++LP   P
Sbjct: 129 MGTSLLAAGLTLGLLSLPYIIITTEEALRRVPNSMREAALAVGATQFESIRDVVLPSAVP 188

Query: 505 YYVTGAITACGGA 517
             +TG +     A
Sbjct: 189 GMLTGLVLTLSRA 201


>gi|126736261|ref|ZP_01752003.1| Phosphate transport system permease protein 2 [Roseobacter sp.
           CCS2]
 gi|126714082|gb|EBA10951.1| Phosphate transport system permease protein 2 [Roseobacter sp.
           CCS2]
          Length = 439

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 55/161 (34%), Gaps = 4/161 (2%)

Query: 46  RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVP 102
               D      +   L      +   ML  + ++L      +      A   R+  ++  
Sbjct: 195 FTAPDASVQRPEAAGLGVAILGSLYMMLVVLFLALPIGVASSIYLEEFAPKNRITDIIEV 254

Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162
            +  + ++P + +    +  F+N          +  +       +  +  S   +L ++P
Sbjct: 255 NISNLAAVPSIVYGILGLAIFINFMEFNQSSPLVGGLVLTL-MTLPTIIISTRAALKSVP 313

Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             + + +     S  Q  ++  +P + PG++   ++ ++  
Sbjct: 314 PSIRDAALGVGASKMQSVFHHVLPLAAPGILTGTIIGLAQA 354



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 6/215 (2%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           ++ ++    R  G  +         L  N     ++          +     W       
Sbjct: 140 ITFDLLAAGRIDGYFKGRVTLETAALDGNTSPEALMVAQALADAGVIETKFNWNFFTAPD 199

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLL 425
                 +   +      +++ ++V++ +A  I +   I++     +  I+  I+     L
Sbjct: 200 ASVQRPEAAGLGVAILGSLYMMLVVLFLALPIGVASSIYLEEFAPKNRITDIIEVNISNL 259

Query: 426 AAFPANVFFPLVVSCVSYY---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
           AA P+ V+  L ++    +   + +  L   L++   T   I+ +  A   + P   ++ 
Sbjct: 260 AAVPSIVYGILGLAIFINFMEFNQSSPLVGGLVLTLMTLPTIIISTRAALKSVPPSIRDA 319

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           A     +  +   + +LP   P  +TG I     A
Sbjct: 320 ALGVGASKMQSVFHHVLPLAAPGILTGTIIGLAQA 354


>gi|294650593|ref|ZP_06727950.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292823590|gb|EFF82436.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 219

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           + +  + +++ L     A +           S+++   L  +++I +S+P L  +   ++
Sbjct: 18  IMVGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWVINITRSVPFLILM-VALI 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G   G  LAAI  +  + +         SL  + + L E +++   +  Q  W
Sbjct: 77  PFTRWIVGTSYGV-LAAIVPLTIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQILW 135

Query: 182 YLGVPFSMPGLVWNMMMSM 200
           ++ +P ++PG+V    +++
Sbjct: 136 HVLLPEALPGIVAGFTVTI 154



 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 38/137 (27%), Gaps = 14/137 (10%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPAN----VFFPLV 437
           V V  I+A +I +P+ + +             I+  +     +  + P         P  
Sbjct: 20  VGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWVINITRSVPFLILMVALIPFT 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              V   +      + L +     +  +               E A +      +   ++
Sbjct: 80  RWIVGTSYGVLAAIVPLTIAAIPFFARI--AEVSLREVDQGLIEAAQAMGCNRKQILWHV 137

Query: 498 ILPGIFPYYVTGAITAC 514
           +LP   P  V G     
Sbjct: 138 LLPEALPGIVAGFTVTI 154


>gi|293394739|ref|ZP_06639031.1| D-methionine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
 gi|291422865|gb|EFE96102.1| D-methionine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
          Length = 217

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T +    +     +       L           +  L  VL  +++I +SIP    L  
Sbjct: 15  ETVMMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANPALYKVLSGLVNIFRSIP-FIILLV 73

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  Q
Sbjct: 74  WMIPFTRMIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGLV    +++
Sbjct: 133 IIKKVLLPEALPGLVNAATITL 154



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I   P +   +     +  + P     V+ 
Sbjct: 16  TVMMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANPALYKVLSGLVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E A +   T  +  
Sbjct: 76  IPFTRMIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPSGLVEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           + ++LP   P  V  A          S +      G +       G     +T
Sbjct: 135 KKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|229523297|ref|ZP_04412704.1| methionine ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229339660|gb|EEO04675.1| methionine ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
          Length = 225

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A ++          +   +++        L  VL  +++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGLVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 59/191 (30%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +  ++   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGLVGFALGIPLGVILHTTKKDGLLENLPLNRVLGAVVNIGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +          I     +     +
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITIM 197

Query: 556 VLGVLIMCCFV 566
            + V+++   V
Sbjct: 198 AVTVVMLIVLV 208


>gi|167841375|ref|ZP_02468059.1| ABC-type spermidine/putrescine transport system, permease component
           I [Burkholderia thailandensis MSMB43]
          Length = 524

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/438 (13%), Positives = 129/438 (29%), Gaps = 57/438 (13%)

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               +    ++  ++A +  + +     M   +Y S      ++ E + +   + WQ   
Sbjct: 93  LLGQVTGLGLLYTDIATMIGLVSIFFPFMVLPLYVSFREFDFEVAEAASTLGATPWQVLT 152

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P    G+   + +         V  +++    +++    IG+ + LA        +
Sbjct: 153 RILIPACATGIRAGVALIFVPALGSYVIPDLLGGAKSMM----IGNVVQLAFTSDRNWPM 208

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
             ++   L  I +         + W                       R+T      G  
Sbjct: 209 GASLSIALLCIVVA--------VTW---------------------FARRTPLDVNQGGI 239

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
             +   P          T+  + F                  L I  F       I   W
Sbjct: 240 GRDARVPFPGVEWIAVPTVAFLYFPIAA--------------LIITSFIDGPSALILSGW 285

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQP 420
              GY        D   ++     ++      + I S++ +   + IG       +  + 
Sbjct: 286 GVKGY----RDIMDDPNLLRAAWTSLTLASATVCIVSVLSVAAAVTIGSTRGRALTVFEE 341

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDF 479
             +L    P  V     +   S   +  +    +         +    + A      ND 
Sbjct: 342 AMKLPLVVPEIVLAVATLLAFSVMTIELDFATLVFSHVVFCLPVAYIPIRAAVMKIDNDL 401

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A++   T W  +  + LP I+P  +TGAI +   + +  + S       +    T  
Sbjct: 402 LDAAATLSATPWSTFWSVTLPLIWPGVLTGAILSFVTSLDDFVTSYFLGGAGLITLPT-- 459

Query: 540 GAYIAESTEKGSFPEVVL 557
             YI  + + G  P++  
Sbjct: 460 --YIYGALKVGLTPKISA 475



 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 4/180 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L F +   II   + G     +    V      +D  +L + A  +     + + I  +
Sbjct: 260 FLYFPIAALIITSFIDGPSALILSGWGVKGYRDIMDDPNLLRAAWTSLTLASATVCIVSV 319

Query: 82  FTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            +   A     +R R   V    + +   +P +     T++ F  +    +       +F
Sbjct: 320 LSVAAAVTIGSTRGRALTVFEEAMKLPLVVPEIVLAVATLLAFSVM---TIELDFATLVF 376

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +     +      +  ++  I  DL + + +   + W  FW + +P   PG++   ++S 
Sbjct: 377 SHVVFCLPVAYIPIRAAVMKIDNDLLDAAATLSATPWSTFWSVTLPLIWPGVLTGAILSF 436


>gi|225386877|ref|ZP_03756641.1| hypothetical protein CLOSTASPAR_00625 [Clostridium asparagiforme
           DSM 15981]
 gi|225046889|gb|EEG57135.1| hypothetical protein CLOSTASPAR_00625 [Clostridium asparagiforme
           DSM 15981]
          Length = 301

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L+  ++ GI+  +          R +  +   T     +      T   ++  ++I+   
Sbjct: 41  LSIAILTGIMGYVFVRGIPNISWRFLTTVTSATKGTFGILGNIVNTLYIVVITLLIATPI 100

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      A+  RL   +    + +  IP + F  F +V+F N    K      A  
Sbjct: 101 GIGAAIYLNEYARPGRLVKAIEFTTETLSGIPSIIFGLFGMVFFGNTLGLKYSILTGALT 160

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P      +     + W     + +P +MPG++  ++++
Sbjct: 161 LTLMILPL--ITRTTQEALKTVPDSYRSGALGIGATKWYMIRTILLPSAMPGILTGVILA 218

Query: 200 MS 201
           + 
Sbjct: 219 IG 220



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF 433
             ++     T++ VV+ ++IA+ I I   I++        +   I+   + L+  P+ +F
Sbjct: 77  FGILGNIVNTLYIVVITLLIATPIGIGAAIYLNEYARPGRLVKAIEFTTETLSGIPSIIF 136

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-------NVIAGASAFPNDFKEVASSF 486
                           L L   ++ G     L                 P+ ++  A   
Sbjct: 137 -----GLFGMVFFGNTLGLKYSILTGALTLTLMILPLITRTTQEALKTVPDSYRSGALGI 191

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
             T W   R I+LP   P  +TG I A G     S      +    ++    LG  +
Sbjct: 192 GATKWYMIRTILLPSAMPGILTGVILAIGRIVGESAALLFTAGSGYYMPKNWLGKVM 248


>gi|138896032|ref|YP_001126485.1| phosphate ABC transporter permease [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248925|ref|ZP_03147625.1| phosphate ABC transporter, inner membrane subunit PstA [Geobacillus
           sp. G11MC16]
 gi|134267545|gb|ABO67740.1| Phosphate ABC transporter [Geobacillus thermodenitrificans NG80-2]
 gi|196211801|gb|EDY06560.1| phosphate ABC transporter, inner membrane subunit PstA [Geobacillus
           sp. G11MC16]
          Length = 289

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   M+    +S +     A      A   R    +   +  +  +P + F    +  F+
Sbjct: 75  SLWLMMIVAPVSFILGVGTAIYLEEYALKNRFTAFIQTNISNLTGVPSIVFGLLGLTIFV 134

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +  + LAA   +       +  +  +++  +P+ L E S +   + WQ    + 
Sbjct: 135 REL--GLGRSVLAAGLTMSLLVFPVIVVAAQEAIRAVPQQLREASYAMGATKWQTICRVV 192

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P ++PG++   ++++S  
Sbjct: 193 LPAALPGMLTGAILALSRA 211



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSC 440
           +++ ++++  ++ I+ +   I++     +   ++ IQ     L   P+ VF    L +  
Sbjct: 75  SLWLMMIVAPVSFILGVGTAIYLEEYALKNRFTAFIQTNISNLTGVPSIVFGLLGLTIFV 134

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
                    L   L M       I+        A P   +E + +   T W+    ++LP
Sbjct: 135 RELGLGRSVLAAGLTMSLLVFPVIVVAAQEAIRAVPQQLREASYAMGATKWQTICRVVLP 194

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TGAI A   A
Sbjct: 195 AALPGMLTGAILALSRA 211


>gi|304407966|ref|ZP_07389616.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus curdlanolyticus YK9]
 gi|304342985|gb|EFM08829.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus curdlanolyticus YK9]
          Length = 316

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 78/218 (35%), Gaps = 23/218 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444
           +++ +IA ++ +P+G+             +   ++P  ++LA  P  V+    +S ++  
Sbjct: 97  LLITVIACLVAVPIGLASAIYLSEYAPTRLRKIVKPILEVLAGVPTIVYGYFALSLITPV 156

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRY 496
                    +         +   +I           SA P   ++ A +   T +     
Sbjct: 157 IRAMFSQAGVFNALSAGIVVGIMIIPMVCSLSEDAMSAVPRSLRDGAYALGATRFEVALK 216

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL------GAYIAESTEKG 550
           I++P  F   V  A+ A   A   +++  VA+     L    L       AYI + +  G
Sbjct: 217 IVVPAAFSGIVASAVLAFSRAIGETMIVTVAAGSTPKLTGNPLESIQTMTAYIVQVS-LG 275

Query: 551 SFPE--VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
             P   V  G +      L +  FL + L  Y  R  R
Sbjct: 276 DTPHGSVEYGTIFAVGMTLFVITFLLNILAQYVARRFR 313



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 82/217 (37%), Gaps = 21/217 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T L  + A ++++      A   ++    RL  ++ PIL+++  +P + +    L+    
Sbjct: 96  TLLITVIACLVAVPIGLASAIYLSEYAPTRLRKIVKPILEVLAGVPTIVYGYFALSLITP 155

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++    +   L+A   +    +  +      ++  +PR L + + +   + ++   
Sbjct: 156 VIRAMFSQAGVFNALSAGIVVGIMIIPMVCSLSEDAMSAVPRSLRDGAYALGATRFEVAL 215

Query: 182 YLGVPFSMPGLVWNMMMSMSGG----WFFVVAS-----------EMIVVGDTVIPLPGIG 226
            + VP +  G+V + +++ S          VA+           E I      I    +G
Sbjct: 216 KIVVPAAFSGIVASAVLAFSRAIGETMIVTVAAGSTPKLTGNPLESIQTMTAYIVQVSLG 275

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
                +++   + A+   +  +  ++ +  Q + R  
Sbjct: 276 DTPHGSVEYGTIFAVGMTLFVITFLLNILAQYVARRF 312


>gi|168186454|ref|ZP_02621089.1| D-methionine transport system permease protein MetI [Clostridium
           botulinum C str. Eklund]
 gi|169295528|gb|EDS77661.1| D-methionine transport system permease protein MetI [Clostridium
           botulinum C str. Eklund]
          Length = 212

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 70/176 (39%), Gaps = 10/176 (5%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPI 112
           L      T   +L + V++++  F+ A +           +  +  V   I+++++S P 
Sbjct: 5   LIPALWETLYMVLISTVLAIVVGFIPAIIMIITYKDGLKPNAAVYKVFDVIVNVLRSFP- 63

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++       GK  G   AAI  +       +T  +  SL  + + + E ++SF
Sbjct: 64  FIILMIVLIPLTKFIVGKSTGTT-AAIVPLTIGCAPFVTRIIESSLKEVDKGVIEAAKSF 122

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
             S +Q  + + +  ++P ++  M +++     F   + +I  G         G Y
Sbjct: 123 GASTFQIVFKVMLKEALPSIISGMTLTLISMVGFSAMAGVIGAGGLGAVAMNYGYY 178



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 10/167 (5%)

Query: 386 TMFRVVVLIIIASIIW-IPVGIWI-----GFRP--HISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V++  ++A ++  IP  I I     G +P   +         +L +FP  +   ++
Sbjct: 12  TLYMVLISTVLAIVVGFIPAIIMIITYKDGLKPNAAVYKVFDVIVNVLRSFPFIILMIVL 71

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +                 + +  G   ++   + +          E A SF  + ++   
Sbjct: 72  IPLTKFIVGKSTGTTAAIVPLTIGCAPFVTRIIESSLKEVDKGVIEAAKSFGASTFQIVF 131

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
            ++L    P  ++G           S ++ V   G +       G Y
Sbjct: 132 KVMLKEALPSIISGMTLTLISMVGFSAMAGVIGAGGLGAVAMNYGYY 178


>gi|21225679|ref|NP_631458.1| binding-protein dependent transport protein [Streptomyces
           coelicolor A3(2)]
 gi|7160143|emb|CAB76328.1| putative binding-protein dependent transport protein [Streptomyces
           coelicolor A3(2)]
          Length = 316

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 82/272 (30%), Gaps = 20/272 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +  +S     P S+  +   R     R H  +   +      ++ ++ ++    +  +A+
Sbjct: 5   VATASDRSAPPPSDTSRPAPRLRTPRRRHSADRPRRSVLLTVLTSLVLLYSLVPLVWLAV 64

Query: 358 GIA-----------------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400
                               +     I   FTY D ++  WL   T+  V +    A+ +
Sbjct: 65  SATKTQEGLSRSAGLWFDGDFALWDNITETFTYDDGVFTRWL-LNTLLYVGLGAGGATFL 123

Query: 401 WIPVGIWIGFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459
            +  G  +          +        A P            S   L    W  ++    
Sbjct: 124 AVLGGYALAKFDFPGRRSVFAVVIGAVAVPGTALAVPTFLMFSKMGLTNTPWAVIIPSLI 183

Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW- 518
           + + +    +    A P +  E A        R +  + LP + P  VT  +      W 
Sbjct: 184 SPFGLYLMWVFATEAIPTELMEAARIDGAGELRTFFRVALPLLAPGIVTVLLFTMVATWN 243

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           N  +   +      +  T GL ++  ++   G
Sbjct: 244 NYFLPLVMLKDPDWYPLTLGLNSWNQQAATAG 275



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 48/156 (30%), Gaps = 5/156 (3%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQS 109
               T D     ++   T L +      +     +     AK        +  ++    +
Sbjct: 92  TETFTYDDGVFTRWLLNTLLYVGLGAGGATFLAVLGGYALAKFDFPGRRSVFAVVIGAVA 151

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P       T + F  +           A+        + +      +   IP +L E +
Sbjct: 152 VPGTALAVPTFLMFSKMGLTNTP----WAVIIPSLISPFGLYLMWVFATEAIPTELMEAA 207

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           R       + F+ + +P   PG+V  ++ +M   W 
Sbjct: 208 RIDGAGELRTFFRVALPLLAPGIVTVLLFTMVATWN 243


>gi|329955884|ref|ZP_08296687.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           clarus YIT 12056]
 gi|328525264|gb|EGF52314.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           clarus YIT 12056]
          Length = 286

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 66/183 (36%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    ++  I+  +++          +       +    +      T   M  + + +  
Sbjct: 21  LSVVGILFAILGFIIYKGIGVIDWEFLTGAPTDGMTSGGILPAIVGTFCLMTGSALFAFP 80

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A    +   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 81  VGVMSGIYMNEYAPKGWIVRFIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SILAG 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L  IP +L E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 139 SLTLGLLSLPLVIRTTEEALKAIPDNLREGSRALGATKLQTIWHVILPMGMPNIITGLIL 198

Query: 199 SMS 201
           ++ 
Sbjct: 199 ALG 201



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII--ASI 399
            +L +    ++  +   I ++ IG I   F        +  G I    V    ++  +++
Sbjct: 17  RLLSLSVVGILFAILGFIIYKGIGVIDWEFLTGAPTDGMTSGGILPAIVGTFCLMTGSAL 76

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G   +  +      + +          P+ VF    ++    Y    +  L
Sbjct: 77  FAFPVGVMSGIYMNEYAPKGWIVRFIRMMTNNLSGIPSIVFGLFGMALFVNYMDFGDSIL 136

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +   +   ++        A P++ +E + +   T  +   ++ILP   P  +TG 
Sbjct: 137 AGSLTLGLLSLPLVIRTTEEALKAIPDNLREGSRALGATKLQTIWHVILPMGMPNIITGL 196

Query: 511 ITACG 515
           I A G
Sbjct: 197 ILALG 201


>gi|163842500|ref|YP_001626904.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
 gi|163673223|gb|ABY37334.1| binding-protein-dependent transport systems inner membrane
           component [Brucella suis ATCC 23445]
          Length = 291

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 7/205 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--QSIPILGFLTFT 119
             Y   + +  +++ V+SL+         A+ R  G      L  M  +S+P +     +
Sbjct: 82  WDYFRNSIIVSVTSTVVSLIIGMSGGYAFARFRFRGKSAT-FLGFMLTRSVPGIA---LS 137

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ FM      +I      I       +    + +      +P+DL E ++    + WQ 
Sbjct: 138 LLLFMVYSRIGIIDTHFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQA 197

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW +  P + PG+    + +    W     +  +        LP +G     A    D  
Sbjct: 198 FWQVEFPLAGPGIASAGIFAFLTCWNEYALASQLTRSVNSKTLP-VGLLDYTAEFTIDWR 256

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMI 264
            +    + M+        ++ + ++
Sbjct: 257 GMCALAVVMIVPALALTFVIQKHLV 281



 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 5/182 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPF-AQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           V   +++ II +  G                   L  + P      L+    S   +   
Sbjct: 93  VTSTVVSLIIGMSGGYAFARFRFRGKSATFLGFMLTRSVPGIALSLLLFMVYSRIGIIDT 152

Query: 450 LWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            +  +L            +I G     P D  E A     T W+ +  +  P   P   +
Sbjct: 153 HFGLILTYVALNIPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGPGIAS 212

Query: 509 GAITACGGAWN-ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567
             I A    WN  ++ S++    +      GL  Y AE T    +  +    ++M    L
Sbjct: 213 AGIFAFLTCWNEYALASQLTRSVNSKTLPVGLLDYTAEFT--IDWRGMCALAVVMIVPAL 270

Query: 568 AL 569
           AL
Sbjct: 271 AL 272


>gi|315652161|ref|ZP_07905158.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485556|gb|EFU75941.1| D-methionine ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 215

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 14/195 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTF 118
            T L   ++   S +       +   S          L  VL  ++++++S+P    L  
Sbjct: 11  ETLLMTAASSFFSYVIGIPLGVILVVSDTNGIKPMPVLNGVLGSVINLIRSVP-FMILLI 69

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V+    L  G  IG  +A I  +  +    +   +  SL  +   + E ++S   S  Q
Sbjct: 70  MVIPLTRLMVGTSIGP-VAVIPPLVIAAAPYIARMVESSLKEVDAGVIEAAKSMGASNMQ 128

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
             + + +P S P L+    +S++    +   +     G         G Y      + D+
Sbjct: 129 IIFKVLLPESRPSLLVGAAISVTTILGYSAMAGFTGGGGLGTIAINYGYY----RYQTDI 184

Query: 239 LAILYAMLTMLGVIF 253
           + I  A+L +L  I 
Sbjct: 185 MFITVAILVILVQII 199



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 18/211 (8%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAA 427
           V  ++     T+         + +I IP+G+ +           P ++  +     L+ +
Sbjct: 2   VSMILTGLYETLLMTAASSFFSYVIGIPLGVILVVSDTNGIKPMPVLNGVLGSVINLIRS 61

Query: 428 FPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            P  +   +V+     +    + P   +  L+I     YI   V +          E A 
Sbjct: 62  VPFMILLIMVIPLTRLMVGTSIGPVAVIPPLVI-AAAPYIARMVESSLKEVDAGVIEAAK 120

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           S   +  +    ++LP   P  + GA  +       S ++     G +       G Y  
Sbjct: 121 SMGASNMQIIFKVLLPESRPSLLVGAAISVTTILGYSAMAGFTGGGGLGTIAINYGYY-- 178

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
               +     + + V I+   V  +      
Sbjct: 179 ----RYQTDIMFITVAILVILVQIIQEIFMR 205


>gi|84489162|ref|YP_447394.1| hypothetical protein Msp_0341 [Methanosphaera stadtmanae DSM 3091]
 gi|84372481|gb|ABC56751.1| PstA [Methanosphaera stadtmanae DSM 3091]
          Length = 281

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 61/152 (40%), Gaps = 4/152 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T   +L A  I +         A + + +   +    + + S+P + F  F + +F+   
Sbjct: 72  TFFAVLIATPIGVGSAIYLYEYAGEGKFV-KAIRFCSESLASLPSIIFGLFGLAFFVEFL 130

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              +    L+A   +    +  +  +   +L  +P +  E S     + WQ    + +P 
Sbjct: 131 --NLGWCILSASLTLAIMAMPTIMRTAENALEAVPPNYREGSLGMGATRWQTIENVILPA 188

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
           ++PG++  +++ M+       A+ M  VG + 
Sbjct: 189 AIPGIITGVILGMARA-IEETAAIMYTVGSST 219



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 64/164 (39%), Gaps = 7/164 (4%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           I+W+ +      F  +    ++ +   T++     ++IA+ I +   I++         +
Sbjct: 43  ISWEFLTTSPKDFGAE--GGILPMIVSTIYVTFFAVLIATPIGVGSAIYLYEYAGEGKFV 100

Query: 419 QPF---AQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIA-GAS 473
           +     ++ LA+ P+ +F    ++    + +L   +  + L +       +         
Sbjct: 101 KAIRFCSESLASLPSIIFGLFGLAFFVEFLNLGWCILSASLTLAIMAMPTIMRTAENALE 160

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           A P +++E +     T W+    +ILP   P  +TG I     A
Sbjct: 161 AVPPNYREGSLGMGATRWQTIENVILPAAIPGIITGVILGMARA 204


>gi|295111606|emb|CBL28356.1| ABC-type metal ion transport system, permease component
           [Synergistetes bacterium SGP1]
          Length = 227

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQS 109
             ++      T + +  + V+S++F  ++  +   +             +L  I DI +S
Sbjct: 18  PTAIIPAIGETLVMVTISFVLSVIFGVMFGIILVMTDKSGLSPHPAFHAILERITDITRS 77

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P++  L   +      + G  IG + AAIFAI              +L  +   L  ++
Sbjct: 78  FPMM-ILIVAIAPVTRFFIGTRIGVK-AAIFAITLGSTPFAVRLTENALNTVDPQLIRMA 135

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +S   +  Q  + + +  ++P L+ N  +
Sbjct: 136 QSIGATKLQIVFKVMLVEALPTLISNFTI 164



 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 12/145 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           +I     T+  V +  +++ I  +  GI +           P   + ++    +  +FP 
Sbjct: 21  IIPAIGETLVMVTISFVLSVIFGVMFGIILVMTDKSGLSPHPAFHAILERITDITRSFPM 80

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFH 487
            +   + ++ V+ + +   + +   +   T     F V       +        +A S  
Sbjct: 81  MILI-VAIAPVTRFFIGTRIGVKAAIFAITLGSTPFAVRLTENALNTVDPQLIRMAQSIG 139

Query: 488 ITGWRWWRYIILPGIFPYYVTGAIT 512
            T  +    ++L    P  ++    
Sbjct: 140 ATKLQIVFKVMLVEALPTLISNFTI 164


>gi|237712166|ref|ZP_04542647.1| phosphate ABC transporter [Bacteroides sp. 9_1_42FAA]
 gi|265751857|ref|ZP_06087650.1| phosphate ABC transporter, permease PstA [Bacteroides sp.
           3_1_33FAA]
 gi|229453487|gb|EEO59208.1| phosphate ABC transporter [Bacteroides sp. 9_1_42FAA]
 gi|263236649|gb|EEZ22119.1| phosphate ABC transporter, permease PstA [Bacteroides sp.
           3_1_33FAA]
          Length = 295

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 70/210 (33%), Gaps = 14/210 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAF---------VLVIGIINILLHGIQETTVPRDIVDIVPI 54
            ++ P     R   + +              +++  I+  +++          +      
Sbjct: 3   QDVFPARQGARKRRSQWLAFGIFKLLSYSIVLILFAILGFIIYKGIGVISWEFLTTAPSD 62

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP 111
            +    +      T   M+ + + +     +        A   +L   +  + + +  IP
Sbjct: 63  GMTGGGIWPAIVGTFYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRMMTNNLSGIP 122

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + F  F +  F+         + LA    +    V  +  +  ++L  IP    E S +
Sbjct: 123 SIVFGLFGMALFVKYMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSFREGSLA 180

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +  Q  W++ +P  MP ++  +++++ 
Sbjct: 181 LGATKLQTIWHVILPMGMPNIITGLILALG 210



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  GI   S  ++    +       IW   +  F ++V    +++   
Sbjct: 32  IVLILFAILGFIIYKGIGVISWEFLTTAPSDGMTGGGIWPAIVGTFYLMVG---SALFAF 88

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA-------FPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G   +  +      + +          P+ VF  F + +        +  L  S
Sbjct: 89  PVGVMSGIYMNEYAPKGKLVRFIRMMTNNLSGIPSIVFGLFGMALFVKYMGFGDSILAGS 148

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+ F+E + +   T  +   ++ILP   P  +TG I A
Sbjct: 149 LTLGLLCVPLVIRTTEEALKAIPDSFREGSLALGATKLQTIWHVILPMGMPNIITGLILA 208

Query: 514 CG 515
            G
Sbjct: 209 LG 210


>gi|331002492|ref|ZP_08326010.1| hypothetical protein HMPREF0491_00872 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410308|gb|EGG89742.1| hypothetical protein HMPREF0491_00872 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 215

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSI 110
             + +    T L  +++ + S L       +   +         +L  VL  I+++++S+
Sbjct: 3   AMILKGLYETLLMTVASSLFSYLLGIPLGVILVVTDNTGIKPMPKLNGVLGMIINLIRSV 62

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   + +   L    +    +A I  +  +    +   +  SL  +   + E ++
Sbjct: 63  PFMILLIMVIPFTRFLVRTSI--GPVAVIPPLVIAASPYIARMVESSLKEVDAGVIEAAK 120

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           S   S  Q  + + +P S P L+    +S++    +   +     G         G Y  
Sbjct: 121 SMGASNAQIIFKVLLPESKPSLLVGAAISVTTILGYSAMAGFTGGGGLGTIAINYGYY-- 178

Query: 231 LAIKEQDLLAILYAMLTMLGVIF 253
               + D++ I  A+L +L  I 
Sbjct: 179 --RYQTDIMLITVAILVILVQII 199



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 16/193 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T+   V   + + ++ IP+G+ +           P ++  +     L+ + P  +   +V
Sbjct: 12  TLLMTVASSLFSYLLGIPLGVILVVTDNTGIKPMPKLNGVLGMIINLIRSVPFMILLIMV 71

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    + P   +  L+I     YI   V +          E A S   +  +  
Sbjct: 72  IPFTRFLVRTSIGPVAVIPPLVI-AASPYIARMVESSLKEVDAGVIEAAKSMGASNAQII 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  + GA  +       S ++     G +       G Y      +     
Sbjct: 131 FKVLLPESKPSLLVGAAISVTTILGYSAMAGFTGGGGLGTIAINYGYY----RYQTDIML 186

Query: 555 VVLGVLIMCCFVL 567
           + + +L++   ++
Sbjct: 187 ITVAILVILVQII 199


>gi|295839886|ref|ZP_06826819.1| D-methionine ABC transporter, permease [Streptomyces sp. SPB74]
 gi|295827693|gb|EFG65545.1| D-methionine ABC transporter, permease [Streptomyces sp. SPB74]
          Length = 247

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L + +  T   +  + ++++        L   + R        L  VL  +++I +S+P 
Sbjct: 10  LGRASWDTLYMVGWSTLVAVALGLPIGVLLVLTARGGLLQNAVLSKVLGQLVNIARSMP- 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG E AAI  +    +      +  S+  +   L E  +S 
Sbjct: 69  FIILMVALMGFTRWLTGTTIGRE-AAIVPLAIGAIPFYARLVETSVREVDHGLVEAVQSM 127

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + W     + VP S+P LV       SG    VV           +   G+G      
Sbjct: 128 GGTTWAVVRKVLVPESLPSLV-------SGATTTVVTLIGYSAMAGTVGAGGLGDIAIRE 180

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++    +++  + +L V+    Q L
Sbjct: 181 GFQRFETGLMWVTVAILAVVISAIQFL 207



 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 20/196 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V    ++A  + +P+G+ +             +S  +     +  + P  +    +
Sbjct: 17  TLYMVGWSTLVAVALGLPIGVLLVLTARGGLLQNAVLSKVLGQLVNIARSMPFIILMVAL 76

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     ++   +     +  L I    +Y    V        +   E   S   T W   
Sbjct: 77  MGFTRWLTGTTIGREAAIVPLAIGAIPFYARL-VETSVREVDHGLVEAVQSMGGTTWAVV 135

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFP 553
           R +++P   P  V+GA T        S ++     G       GLG   I E  ++    
Sbjct: 136 RKVLVPESLPSLVSGATTTVVTLIGYSAMAGTVGAG-------GLGDIAIREGFQRFETG 188

Query: 554 EVVLGVLIMCCFVLAL 569
            + + V I+   + A+
Sbjct: 189 LMWVTVAILAVVISAI 204


>gi|294795077|ref|ZP_06760212.1| D-methionine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294454439|gb|EFG22813.1| D-methionine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
          Length = 217

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T    + + V+++L       +          ++  L  VL  I++  +S+P 
Sbjct: 9   LITGTLDTLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVTLNKVLGAIVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   A +  +  + +  +   +  S+ +I   + E ++S 
Sbjct: 68  FIILMVAIIPFTRMVVGTSIGTTAACV-PLTIAAIPFLARLVETSIKDINFGVIEAAQSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S  Q  W + +P ++P ++ N+
Sbjct: 127 GASPLQIIWKVLLPEALPTIIDNV 150



 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T+   ++  ++A ++ IP+G+ +             ++  +        + P  +     
Sbjct: 16  TLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVTLNKVLGAIVNATRSVPFIILMVAI 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P     V          + L +        L               E A S   +  + 
Sbjct: 76  IPFTRMVVGTSIGTTAACVPLTIAAIPFLARLVETS--IKDINFGVIEAAQSMGASPLQI 133

Query: 494 WRYIILPGIFPYYV 507
              ++LP   P  +
Sbjct: 134 IWKVLLPEALPTII 147


>gi|227820252|ref|YP_002824223.1| sugar ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339251|gb|ACP23470.1| probable sugar ABC transporter, permease protein [Sinorhizobium
           fredii NGR234]
          Length = 299

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  L + ++SL  +   A    + R  G   V ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVALGSTILSLAASIFAAYAIERVRFTGSRPVGLMIFLAYLVPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  ++LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKF----GIYDSKLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGATRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LIRIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTVPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 ALMAGALFGSLPVVILYSFFV 286



 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 56/173 (32%), Gaps = 12/173 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +G     I Y++   +Y   L+       TM   +   I++    I     I       
Sbjct: 72  VVGPTLDHIKYLLFETSYPGWLWN------TMLVALGSTILSLAASIFAAYAIERVRFTG 125

Query: 416 SKIQPFAQLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAG 471
           S+       LA    P+ +F PL      +   +  L L              L      
Sbjct: 126 SRPVGLMIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLLMGYF- 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             + P + +E A     T W+    IILP   P  ++  I A   +WN  I +
Sbjct: 185 -RSIPFELEESALVDGATRWQILIRIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|182438383|ref|YP_001826102.1| putative sugar ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326779034|ref|ZP_08238299.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178466899|dbj|BAG21419.1| putative sugar ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326659367|gb|EGE44213.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 297

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 74/203 (36%), Gaps = 4/203 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVV 121
           +Y   + L   + +V+S L  F+ AT   + R +    L+ +  + Q +P+         
Sbjct: 89  RYFLNSLLVAGTVVVLSALVAFLAATAVTRFRFKFRTTLLIMFLVAQMVPVEALTIPLFF 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +      +G+ +    A        M       +  +P  LEE +     S  +  W
Sbjct: 149 LMRDFGQLNTLGSLILPHLAFSLPFAIWMLRGF---VKAVPEALEEAAYIDGASRTRFLW 205

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P   PGLV   + S    W   + ++  ++ DT      +   +     E D   I
Sbjct: 206 QILFPLVFPGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPDENDWGGI 265

Query: 242 LYAMLTMLGVIFLYDQLLFRPMI 264
           + A   M   + ++  L+ R ++
Sbjct: 266 MAASTVMTIPVLVFFVLVQRRLV 288



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 2/194 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVF-FPLVVSCVSY 443
           ++     ++++++++       +        + +     +    P      PL      +
Sbjct: 94  SLLVAGTVVVLSALVAFLAATAVTRFRFKFRTTLLIMFLVAQMVPVEALTIPLFFLMRDF 153

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             LN    L L  +  +  + ++ +     A P   +E A     +  R+   I+ P +F
Sbjct: 154 GQLNTLGSLILPHLAFSLPFAIWMLRGFVKAVPEALEEAAYIDGASRTRFLWQILFPLVF 213

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V  ++ +    WN  + ++          T  +   +    ++  +  ++    +M 
Sbjct: 214 PGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPDENDWGGIMAASTVMT 273

Query: 564 CFVLALNRFLWHPL 577
             VL     +   L
Sbjct: 274 IPVLVFFVLVQRRL 287


>gi|89069579|ref|ZP_01156923.1| phosphate ABC transporter, permease protein [Oceanicola granulosus
           HTCC2516]
 gi|89044914|gb|EAR51004.1| phosphate ABC transporter, permease protein [Oceanicola granulosus
           HTCC2516]
          Length = 442

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 52/142 (36%), Gaps = 4/142 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ML  + ++L      +      A   R+   +   +  + ++P + F    + 
Sbjct: 219 MLGSFFMMLVVLALALPIGVAASIYLEEFAPKNRITDFIEVNISNLAAVPSIVFGILGLA 278

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  + G    A L     +    +  +  S   +L  +P  +   +     S  Q  +
Sbjct: 279 VFIQ-FAGLPQSAPLVGGLVLTLMTLPTIIISTRAALAAVPPSIRAAALGVGASKMQSVF 337

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P +MPG++   ++ ++  
Sbjct: 338 HHVLPLAMPGILTGTIIGLAQA 359



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPL 436
            + M     ++++   + +P+G+              I+  I+     LAA P+ VF  L
Sbjct: 216 GVAMLGSFFMMLVVLALALPIGVAASIYLEEFAPKNRITDFIEVNISNLAAVPSIVFGIL 275

Query: 437 VVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            ++    +   P    L   L++   T   I+ +  A  +A P   +  A     +  + 
Sbjct: 276 GLAVFIQFAGLPQSAPLVGGLVLTLMTLPTIIISTRAALAAVPPSIRAAALGVGASKMQS 335

Query: 494 WRYIILPGIFPYYVTGAITACGGA 517
             + +LP   P  +TG I     A
Sbjct: 336 VFHHVLPLAMPGILTGTIIGLAQA 359


>gi|269962790|ref|ZP_06177131.1| phosphate ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269832480|gb|EEZ86598.1| phosphate ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 336

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      M+
Sbjct: 60  RIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVATMI 118

Query: 74  SAMVISLLFTFVYA----------TLAAKSRRLGMVLVPILDIMQSIPILGF----LTFT 119
            A ++S     +                  +RL  ++ P ++++  IP + +    L   
Sbjct: 119 VASIVSTAGAVLVGVPVGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLVII 178

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V    N++        LA I  +    +  +      S+  +PR  +E S +   S    
Sbjct: 179 VPLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKIYT 238

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
            + L VP +  G++  +++ +       +A  M++  
Sbjct: 239 IFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 275



 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 8/131 (6%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+ +       N  L   +++       
Sbjct: 149 KRLADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPT 208

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 209 VITVSETSIRAVPRTYKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMA 268

Query: 524 SEVASWGHIHL 534
             +       +
Sbjct: 269 IIMVMGNAPAM 279


>gi|188589699|ref|YP_001920325.1| putrescine transport system permease protein PotH [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251779938|ref|ZP_04822858.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|188499980|gb|ACD53116.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum E3 str. Alaska E43]
 gi|243084253|gb|EES50143.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 280

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 79/211 (37%), Gaps = 13/211 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             F+++  II +      +T+            L          ++ L  L + +  L+ 
Sbjct: 18  ALFIVIPLIIVLFFSFTTKTSSGYSFSLENYNNLFNSQYLYIFKQSILLALESTIACLVI 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIM--------QS---IPILGF--LTFTVVYFMNLYPG 129
            +  + + +K        + +L I+        ++   +PILG   L   ++  + + P 
Sbjct: 78  GYPASYIISKMNLSKRNFLMMLFILPMWMNFLLRTYAWVPILGKTGLINLLLGKIGIGPI 137

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +  + A +  +  + +  M   +Y  L  + +DL   +     +  + F  + +P SM
Sbjct: 138 SFLYNDGAVLLGMIYNFLPFMVLPIYTILIKMDQDLINAAHDLGANRLKVFTKVVLPLSM 197

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           PG++  + M         V S ++  G  ++
Sbjct: 198 PGIISGITMVFMPAVSTFVISRLLGGGQYML 228



 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 20/60 (33%)

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D    A        + +  ++LP   P  ++G       A +  ++S +   G   L
Sbjct: 169 MDQDLINAAHDLGANRLKVFTKVVLPLSMPGIISGITMVFMPAVSTFVISRLLGGGQYML 228


>gi|153955700|ref|YP_001396465.1| ModB [Clostridium kluyveri DSM 555]
 gi|219856074|ref|YP_002473196.1| hypothetical protein CKR_2731 [Clostridium kluyveri NBRC 12016]
 gi|146348558|gb|EDK35094.1| ModB [Clostridium kluyveri DSM 555]
 gi|219569798|dbj|BAH07782.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 228

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 69/198 (34%), Gaps = 11/198 (5%)

Query: 72  MLSAMVISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
              A +I+       A      + +    +  I  +   +P      F ++ F    P  
Sbjct: 15  TFIATIITFFVGIAAAYWMTNYNGKFKSAVDTIFTLPLVLPPTVVGFFLLLIFGKNGPMG 74

Query: 131 VIGAELAA---------IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +  ++           + A        M  +   +   +  ++   +R+  +S W+ FW
Sbjct: 75  KLLLKIGTNLIFSWPAAVIAATIIAFPLMYRTTKGAFEQVDNNIVNAARTLGVSRWKIFW 134

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P + PG+    ++S +        + ++V G+       I   I  A +  ++   
Sbjct: 135 KVILPLAWPGIAAATILSFARA-LGEFGATLMVAGNIPGRTQTIPLAIYFAAESGEMDKA 193

Query: 242 LYAMLTMLGVIFLYDQLL 259
           L  ++ ++ +  +   L+
Sbjct: 194 LMWVILIVIISTIVIFLM 211



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 15/203 (7%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           I++    +  II   + I    W+  +     S +     L    P  V    ++     
Sbjct: 10  ISVKTTFIATIITFFVGIAAAYWMTNYNGKFKSAVDTIFTLPLVLPPTVVGFFLLLIFGK 69

Query: 444 YHLNPNLWLSLLMIFGTQWY------------ILFNVIAGA-SAFPNDFKEVASSFHITG 490
                 L L +       W             +++    GA     N+    A +  ++ 
Sbjct: 70  NGPMGKLLLKIGTNLIFSWPAAVIAATIIAFPLMYRTTKGAFEQVDNNIVNAARTLGVSR 129

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W+ +  +ILP  +P      I +   A      + + + G+I  RT  +   I  + E G
Sbjct: 130 WKIFWKVILPLAWPGIAAATILSFARALGEFGATLMVA-GNIPGRTQTIPLAIYFAAESG 188

Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573
              + ++ V+++      +   +
Sbjct: 189 EMDKALMWVILIVIISTIVIFLM 211


>gi|146320959|ref|YP_001200670.1| phosphate ABC transporter permease [Streptococcus suis 98HAH33]
 gi|145691765|gb|ABP92270.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus suis 98HAH33]
          Length = 251

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +       A+  +   L   +   ++I+ S+P +    F  + F+
Sbjct: 21  SFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLFGYLIFV 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  +   + L+   A+    +  MT ++  SL ++     E   +  LS W+   ++ 
Sbjct: 81  VQF--EYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETVLHVV 138

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++PG+V  ++++ SG  F   A+ +   G +   L
Sbjct: 139 IPEALPGIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 175



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 9/145 (6%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-FPANVFFP-LVVSCV 441
            I ++    L+++  +I +P+    G      +K  P    +          P +VV   
Sbjct: 15  GIQLYNSFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLF 74

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWW 494
            Y            ++ G     +FN+        +  +       E   +  ++ W   
Sbjct: 75  GYLIFVVQFEYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWN 519
            ++++P   P  VTG + A G  + 
Sbjct: 135 LHVVIPEALPGIVTGIVLASGRIFG 159


>gi|315152292|gb|EFT96308.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecalis TX0031]
          Length = 294

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 10/186 (5%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++  +L   +I IL  GI   +    +            +      +   +L  M+IS+
Sbjct: 19  GVIVLILAALLIYILARGIPHISWEF-LTQPSRAYQVGGGIGIQLFNSLYLLLITMIISI 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAE 135
             +          AK   L  ++   ++I+ S+P  ++G   F +      Y   ++   
Sbjct: 78  PISLGAGIYLSEYAKKNWLTDLIRTSIEILSSLPSVVVGLFGFLIFVVQIGYGFSILSGA 137

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA  F         +T ++ +SL  I     E   +  LS W+    + +P ++PG++  
Sbjct: 138 LALTFFNLPL----LTRNVEESLKAIHYTQREAGLALGLSRWETVKKVILPEALPGILTG 193

Query: 196 MMMSMS 201
           +++S  
Sbjct: 194 VILSSG 199



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      V+  +   +    +   + H ++           V     I +F  + 
Sbjct: 8   KIATGILYAVSGVIVLILAALLIYILARGIPHISWEFLTQPSRAYQVGGGIGIQLFNSLY 67

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSY 443
           L++I  II IP+ +  G           ++  I+   ++L++ P+ V   F  ++  V  
Sbjct: 68  LLLITMIISIPISLGAGIYLSEYAKKNWLTDLIRTSIEILSSLPSVVVGLFGFLIFVVQI 127

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            +    L  +L + F     +  NV     A     +E   +  ++ W   + +ILP   
Sbjct: 128 GYGFSILSGALALTFFNLPLLTRNVEESLKAIHYTQREAGLALGLSRWETVKKVILPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I + G  + 
Sbjct: 188 PGILTGVILSSGRIFG 203


>gi|297159340|gb|ADI09052.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 251

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 6/135 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +     ++ + IS       A +     + G V V I +  +++P         V  +
Sbjct: 27  LGQHLYLTVACLAISCAIALPVAVVLGHIGKGGAVAVNISNAGRAVPTFA------VLVL 80

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L        +   I A+    +  +  + Y  +    R++ E +R   ++G Q    + 
Sbjct: 81  LLLSPLGTHGDWPTIVALVLFAIPPLLTNAYVGMREADREVVEAARGMGMTGGQLVARVE 140

Query: 185 VPFSMPGLVWNMMMS 199
           +P + P ++  +  +
Sbjct: 141 LPLAYPLIMTGVRSA 155



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 56/158 (35%), Gaps = 2/158 (1%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           +G+  ++  ++     +     V       ++  V  + I+  I +PV + +G      +
Sbjct: 1   MGVISEAWTWLTTGSHWSGTDGVWHRLGQHLYLTVACLAISCAIALPVAVVLGHIGKGGA 60

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476
                +    A P       V+  +S    + +    + ++      +L N   G     
Sbjct: 61  VAVNISNAGRAVPTFAVL--VLLLLSPLGTHGDWPTIVALVLFAIPPLLTNAYVGMREAD 118

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            +  E A    +TG +    + LP  +P  +TG  +A 
Sbjct: 119 REVVEAARGMGMTGGQLVARVELPLAYPLIMTGVRSAA 156


>gi|300088410|ref|YP_003758932.1| phosphate ABC transporter inner membrane subunit PstA
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299528143|gb|ADJ26611.1| phosphate ABC transporter, inner membrane subunit PstA
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 288

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 8/202 (3%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65
           I    ++  +      L+   ++  +I ++++G                  +   LP   
Sbjct: 14  IFTQRVAVTLLATATALVVIPIIFILIYMIVNGYSVIDWAFLTEAPSRAGKEGGILPAII 73

Query: 66  SRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
             T   M+  ++ +L    +        A    L  ++   +  +  +P + F  F +  
Sbjct: 74  G-TFYLMVGTIIFALPIGVMAGIYLSEYAGDSWLTRLINLAIINLAGVPSIVFGLFGLSV 132

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM-YQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           F+       +G  L A      +Q   MT +   +S+  IP++  E S +  +S WQ   
Sbjct: 133 FVLTL---DLGMSLLAASLTLAAQALAMTITTSRESISAIPKEYREGSLAIGVSKWQTIR 189

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
           +  +P + PG++   +++MS  
Sbjct: 190 HAVLPEAFPGILTGAILAMSRA 211



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 5/209 (2%)

Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373
             +   +   R       + L +      ++ I +  +   V                  
Sbjct: 3   AYIKSHVHNRRIFTQRVAVTLLATATALVVIPIIFILIYMIVNGYSVIDWAFLTEAPSRA 62

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPA 430
                ++     T + +V  II A  I +  GI++        ++  I      LA  P+
Sbjct: 63  GKEGGILPAIIGTFYLMVGTIIFALPIGVMAGIYLSEYAGDSWLTRLINLAIINLAGVPS 122

Query: 431 NVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            VF  F L V  ++       L  SL +        +       SA P +++E + +  +
Sbjct: 123 IVFGLFGLSVFVLTLDLGMSLLAASLTLAAQALAMTITTSRESISAIPKEYREGSLAIGV 182

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGA 517
           + W+  R+ +LP  FP  +TGAI A   A
Sbjct: 183 SKWQTIRHAVLPEAFPGILTGAILAMSRA 211


>gi|226363595|ref|YP_002781377.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242084|dbj|BAH52432.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 281

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 4/198 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126
           +T+       I L+     A   A+ + R    ++ I+      P +  LT     F ++
Sbjct: 78  STIIGAVTTAIGLIVGVGTAYALARLQFRGKHAVLGIILAASMFPGVAVLTPLFQLFTSM 137

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                 G   A I    +  +    +++      +P +LEE +R    S  Q F  + +P
Sbjct: 138 G---WFGTYQALIIPNISFVLPLTIYTLTAFFKELPWELEEAARIDGASRRQAFRMVLLP 194

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + PGL    +++    W   + S  +    T      I  +      E+   +++ A  
Sbjct: 195 LAAPGLFTTAILAFIASWNEYLISSQLSNDITQPATVAIAQFAGSKPHEEPFTSVMAAGT 254

Query: 247 TMLGVIFLYDQLLFRPMI 264
            +   + +   LL R ++
Sbjct: 255 VVTIPLVIIVLLLQRRIV 272



 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 2/217 (0%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPF 421
           ++    N F+     +       +     V   I  I+ +     +          +   
Sbjct: 55  TLDNFANVFSTGAGNHFARALVNSTIIGAVTTAIGLIVGVGTAYALARLQFRGKHAVLGI 114

Query: 422 AQLLAAFPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               + FP      PL     S         L +  I       ++ + A     P + +
Sbjct: 115 ILAASMFPGVAVLTPLFQLFTSMGWFGTYQALIIPNISFVLPLTIYTLTAFFKELPWELE 174

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A     +  + +R ++LP   P   T AI A   +WN  ++S   S       T  + 
Sbjct: 175 EAARIDGASRRQAFRMVLLPLAAPGLFTTAILAFIASWNEYLISSQLSNDITQPATVAIA 234

Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
            +      +  F  V+    ++   ++ +   L   +
Sbjct: 235 QFAGSKPHEEPFTSVMAAGTVVTIPLVIIVLLLQRRI 271


>gi|283796466|ref|ZP_06345619.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           M62/1]
 gi|291075877|gb|EFE13241.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           M62/1]
          Length = 291

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 70/182 (38%), Gaps = 5/182 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +   F+  ++      I    +G     F ++    +      T++ V + ++++  + +
Sbjct: 23  IAIFFFTLLIAFAGKVIIGGLLGATPEMFRFERKGSIGNQLFNTVYLVFISLVVSVPLGV 82

Query: 403 PVGIWIGFRP---HISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMI 457
             GI++G       ++  ++   + L++ P+ V   F  +V  V +      +  +L + 
Sbjct: 83  GAGIYLGMYAKPGRVTRFLRMCIETLSSLPSIVVGLFGYLVFLVFFGMGKSLIAGALSVS 142

Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
             T   I           P  + + +     T W+   +++LP   P  +TG I A G  
Sbjct: 143 ILTLPLITTTTEDAIKGLPAGYYQASLGLGATKWQSIFHVLLPACVPRIMTGVILAAGRG 202

Query: 518 WN 519
           + 
Sbjct: 203 FG 204



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 65/163 (39%), Gaps = 6/163 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T   +  ++V+S+           + AK  R+   L   ++ + S+P +    F  +
Sbjct: 63  LFNTVYLVFISLVVSVPLGVGAGIYLGMYAKPGRVTRFLRMCIETLSSLPSIVVGLFGYL 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +   +  + +A   ++    +  +T +   ++  +P    + S     + WQ  +
Sbjct: 123 VFLVFF--GMGKSLIAGALSVSILTLPLITTTTEDAIKGLPAGYYQASLGLGATKWQSIF 180

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           ++ +P  +P ++  ++++   G F   A+ +   G       G
Sbjct: 181 HVLLPACVPRIMTGVILAAGRG-FGEAAALLYTTGSGTALKWG 222


>gi|55378847|ref|YP_136697.1| phosphate ABC transporter permease [Haloarcula marismortui ATCC
           43049]
 gi|55231572|gb|AAV46991.1| phosphate ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 884

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 69/176 (39%), Gaps = 5/176 (2%)

Query: 29  IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88
             ++ + +      + P  +   +P+  +   +      T   ++ A + ++      A 
Sbjct: 610 FNVLGVSIANEGSLSWPMVMQAYIPLGAEPGGIMPAIIGTVWLVIGATLFAVPLGVGAAV 669

Query: 89  LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
                A+  +   ++    + + S P + F  F   + +    G    + LA +  +   
Sbjct: 670 FLTEYAEQGQFTALVEIATNALWSTPSIVFGLFGAAFLIPRLGGDE--SLLAGMLVLGFM 727

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
            +  +  +  +S+  +P +  + S +  ++ W+    + +P +MPG++  +++ + 
Sbjct: 728 LLPLVLITSRESIKAVPDEYRDASAALGVTQWETIKSVVLPAAMPGVITGVILGVG 783



 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 58/147 (39%), Gaps = 5/147 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            +   ++     T++ V+   + A  + +   +++     +   ++ ++     L + P+
Sbjct: 637 AEPGGIMPAIIGTVWLVIGATLFAVPLGVGAAVFLTEYAEQGQFTALVEIATNALWSTPS 696

Query: 431 NVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            VF  F               L   L++ F     +L        A P+++++ +++  +
Sbjct: 697 IVFGLFGAAFLIPRLGGDESLLAGMLVLGFMLLPLVLITSRESIKAVPDEYRDASAALGV 756

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACG 515
           T W   + ++LP   P  +TG I   G
Sbjct: 757 TQWETIKSVVLPAAMPGVITGVILGVG 783


>gi|314914684|gb|EFS78515.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL005PA4]
 gi|314930615|gb|EFS94446.1| putative type IV conjugative transfer system protein TraL
           [Propionibacterium acnes HL067PA1]
          Length = 301

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 70  LRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFLTFTVV 121
           L  L    ++ + T     LAA S        RR G++ + ++ +   +  +  +   + 
Sbjct: 89  LNTLIIAAVTAVLTVFLGALAAYSFSRMRFKGRRGGLLALMLVQMFPQLLTVVAIFLLLT 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  ++YP   IG+ LA I       +   T+ MY     +P+ L+E +R       + F+
Sbjct: 149 WLGDVYPVLGIGSRLALIMVYLGGALGANTYLMYGFFNTVPQSLDEAARVDGAGHARIFF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            L +P + P L    ++S  G +   V + +I+  D       IG Y  ++ +      +
Sbjct: 209 TLILPLASPILAVVGLLSFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGV 268

Query: 242 LYAMLTMLGV 251
             A   +  +
Sbjct: 269 FAAGAVLAAL 278



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 81/293 (27%), Gaps = 20/293 (6%)

Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336
                 S +    R T F +      W     +   V      + V+            S
Sbjct: 2   STATVSSAIKDANRNTPFSKRFKSQWWRHLLGIIAVVFAAFPLVYVLSASLAPGGTLTGS 61

Query: 337 NQRVSYMLDIFWFCVVC-GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395
           N+  S      +  +V   V     W     I+   T    +++  L   +  R+     
Sbjct: 62  NKLFSQTDFSNYSKLVSDPVRPYAQWYLNTLIIAAVTAVLTVFLGALAAYSFSRMRFKGR 121

Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
              ++ + +                   ++A F    +   V   +        + + L 
Sbjct: 122 RGGLLALML----------VQMFPQLLTVVAIFLLLTWLGDVYPVLGIGSRLALIMVYLG 171

Query: 456 MIFGTQWYI---LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
              G   Y+    FN        P    E A        R +  +ILP   P      + 
Sbjct: 172 GALGANTYLMYGFFNT------VPQSLDEAARVDGAGHARIFFTLILPLASPILAVVGLL 225

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
           +  G++   +V+ V      H  T  +G Y   STE  S   V     ++   
Sbjct: 226 SFIGSFTEYVVASVILGADPHTSTLAIGLYQYVSTENSSNWGVFAAGAVLAAL 278


>gi|300782031|ref|YP_003762322.1| proline/glycine/betaine ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299791545|gb|ADJ41920.1| permease component of ABC-type proline/glycine betaine transport
           system [Amycolatopsis mediterranei U32]
          Length = 215

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 9/182 (4%)

Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           VV   I+A+++ + +G+ +   P  S+     A  +   P+     L+   +    L P 
Sbjct: 25  VVQCTILAAVLGVLIGVAVYRSPIGSAVATALASTILTVPSFA---LLGLLIPISGLGPT 81

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
             +  L+++G    I+ N I G         + A    ++ +     + L   +P  +TG
Sbjct: 82  TAVIALVLYG-LLPIVRNTIVGLDGVDPAVTDAARGIGMSRFGVLTRVELRLAWPAILTG 140

Query: 510 AITACGGAWNASIVSEVASWGHIHLRT-TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
              A       ++++  A          +GL      +    S  + V G + +    L 
Sbjct: 141 MRVATQMLMGIAVIAAYAKGPGFGAEVFSGL----TNAGSTNSLNQAVTGTVGVVILALL 196

Query: 569 LN 570
           L+
Sbjct: 197 LD 198



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 13/204 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           I+     L   A   T  ++   +++ +   +      +S     V   +   + ++P  
Sbjct: 7   ISDRASKLWLEAYLHTSMVVQCTILAAVLGVLIGVAVYRSPIGSAVATALASTILTVPSF 66

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L         L P   +G   A I  +    +  +  +    L  +   + + +R   
Sbjct: 67  ALL-------GLLIPISGLGPTTAVIALVLYGLL-PIVRNTIVGLDGVDPAVTDAARGIG 118

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMS-MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
           +S +     + +  + P ++  M ++        V+A+     G       G+      A
Sbjct: 119 MSRFGVLTRVELRLAWPAILTGMRVATQMLMGIAVIAAYAKGPGFGAEVFSGL----TNA 174

Query: 233 IKEQDLLAILYAMLTMLGVIFLYD 256
                L   +   + ++ +  L D
Sbjct: 175 GSTNSLNQAVTGTVGVVILALLLD 198


>gi|88854341|ref|ZP_01129008.1| ABC transporter, permease protein [marine actinobacterium PHSC20C1]
 gi|88816149|gb|EAR26004.1| ABC transporter, permease protein [marine actinobacterium PHSC20C1]
          Length = 293

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 16/181 (8%)

Query: 89  LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQV 147
           L  + R     L+P + I Q++P++ F      +   +  G     +  ++  I      
Sbjct: 108 LMQRWRLAEFGLLPWIVISQTVPLIAFAPVVKSWGSRVEIGSFEWQDWMSVALIASYLAF 167

Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207
           + +T    + L +  R   E+  ++    W     L  P ++P L+  + +  +      
Sbjct: 168 FPITVGALKGLQSPDRIHLELFETYASGYWSTLKQLRFPAAVPYLLPALRLGAANAVIGA 227

Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQD----------LLAILYAMLTMLGVIFLYDQ 257
           V +E+     +     GIG  +     +              AI+  ++    V  L   
Sbjct: 228 VVAEV-----STGLQGGIGRLLIQFAGQASGDPAKAWGPIFGAIVLGLVAAGSVALLSVI 282

Query: 258 L 258
           L
Sbjct: 283 L 283



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 10/202 (4%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
                 V      T+        +  ++ +   + +         + P+  +    P   
Sbjct: 74  LPLWAVVALAALTTLGIAAAGWAVGVVVGVGFALLMQRWRLAEFGLLPWIVISQTVPLIA 133

Query: 433 FFPLVVSC-----VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
           F P+V S      +  +     + ++L+  +   + I    + G  +      E+  ++ 
Sbjct: 134 FAPVVKSWGSRVEIGSFEWQDWMSVALIASYLAFFPITVGALKGLQSPDRIHLELFETYA 193

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
              W   + +  P   PY +         A   ++V+EV           G+G  + +  
Sbjct: 194 SGYWSTLKQLRFPAAVPYLLPALRLGAANAVIGAVVAEV-----STGLQGGIGRLLIQFA 248

Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569
            + S         I    VL L
Sbjct: 249 GQASGDPAKAWGPIFGAIVLGL 270


>gi|67639084|ref|ZP_00437994.1| glycine betaine/L-proline transport system permease protein ProW
           [Burkholderia mallei GB8 horse 4]
 gi|238519633|gb|EEP83103.1| glycine betaine/L-proline transport system permease protein ProW
           [Burkholderia mallei GB8 horse 4]
          Length = 113

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + WQ  + +  P ++P ++  +  ++      V+ + M+  G       G+G+ +  +
Sbjct: 1   GCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAG-------GLGNDVLAS 53

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
           I+  D+     + L+++ +  + D++
Sbjct: 54  IQRLDIGLGFESGLSVVLLAIILDRI 79


>gi|322382886|ref|ZP_08056721.1| phosphate ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153155|gb|EFX45610.1| phosphate ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 274

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVVLIIIASI 399
                 + G+ + + ++ +   + H ++       + +         +F    ++ ++ +
Sbjct: 4   WLAGFSIIGLLVWVLYRILSAGLPHLSWDFITGLPEDIMPGGGVGPMLFNSFYILFLSLV 63

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFPLVV-------SCVSYYHLNPNLW 451
             +PVG   G    + +K     + +  +  A    P +V         V +++L  ++ 
Sbjct: 64  FSLPVGFGAGIYLAVYAKKNRLTEFIRISVEALASVPSIVFGLFGFLLFVQFFNLKISVL 123

Query: 452 LSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L +      +L  V  GA    P+ + E + +   T W+  R ++ P   P  +TG 
Sbjct: 124 SGSLALALLNLPVLVRVTEGAFRTVPHSYWEASLALGSTRWQAIRKVLFPAALPSLITGI 183

Query: 511 ITACGGA 517
               G A
Sbjct: 184 TLVAGRA 190



 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 9/184 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPR---DIVDIVPITLDVHS-LPQYASRTTLRMLSAMV 77
            LA   +IG++  +L+ I    +P    D +  +P  +     +      +   +  ++V
Sbjct: 4   WLAGFSIIGLLVWVLYRILSAGLPHLSWDFITGLPEDIMPGGGVGPMLFNSFYILFLSLV 63

Query: 78  ISLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            SL   F       + AK  RL   +   ++ + S+P + F  F  + F+  +  K+   
Sbjct: 64  FSLPVGFGAGIYLAVYAKKNRLTEFIRISVEALASVPSIVFGLFGFLLFVQFFNLKISVL 123

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +   A+    V  +      +   +P    E S +   + WQ    +  P ++P L+ 
Sbjct: 124 SGSLALALLNLPV--LVRVTEGAFRTVPHSYWEASLALGSTRWQAIRKVLFPAALPSLIT 181

Query: 195 NMMM 198
            + +
Sbjct: 182 GITL 185


>gi|156933299|ref|YP_001437215.1| hypothetical protein ESA_01111 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531553|gb|ABU76379.1| hypothetical protein ESA_01111 [Cronobacter sakazakii ATCC BAA-894]
          Length = 243

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 8/185 (4%)

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
           G+       +      Q+    + L  + +      + +A  + + + +   +     + 
Sbjct: 27  GLFHWLFPGLARPVYLQESFVALTLSHLGLVAAAGAVSVACGVAVGIAVTRPWGREFRAL 86

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
            +  A     FP      + V  + +      + L L  +      +L   +AG SA P 
Sbjct: 87  AETLAAAGQTFPPVAVLAIAVPVMGFGREPAIVALILYGLL----PVLQGTLAGLSAVPE 142

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA----CGGAWNASIVSEVASWGHIH 533
           D KEVA    ++  +  R + LP      + G  T+     G A  AS V        I 
Sbjct: 143 DVKEVARGVGMSRAQILRKVELPLASGVMLAGIRTSVIINIGTATIASTVGASTLGTPII 202

Query: 534 LRTTG 538
           +  +G
Sbjct: 203 IGLSG 207



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 21/208 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113
           + L +  L   A+   + +   + + +  T  +       R    +   +    Q+ P +
Sbjct: 47  VALTLSHLGLVAAAGAVSVACGVAVGIAVTRPWG------REFRALAETLAAAGQTFPPV 100

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
             L   V                 AI A+    +  +       L  +P D++EV+R   
Sbjct: 101 AVLAIAVPVMG--------FGREPAIVALILYGLLPVLQGTLAGLSAVPEDVKEVARGVG 152

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
           +S  Q    + +P +   ++  +  S+         +  +           +G+ I + +
Sbjct: 153 MSRAQILRKVELPLASGVMLAGIRTSVIINIGTATIASTVGAST-------LGTPIIIGL 205

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFR 261
              +   ++   + +     L D+L  R
Sbjct: 206 SGFNTAYVIQGAVLVALAAVLVDRLFER 233


>gi|114706440|ref|ZP_01439342.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538301|gb|EAU41423.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi
           HTCC2506]
          Length = 440

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 75  AMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
            M+I L         A       A   R   ++   ++ + ++P + F    +  F+N +
Sbjct: 228 MMLIVLALALPIGVAASIYLEEFAPKNRFTDLIEVNINNLAAVPSIVFGILGLAVFINWF 287

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
            G    A L     +    +  +  +   +L  +P  +   +     S  Q  +   +P 
Sbjct: 288 -GLPRSAALVGGLVLTLMTLPTIIIATRAALRAVPPSIRWAALGLGASKTQTVFQHVLPL 346

Query: 188 SMPGLVWNMMMSMSGG 203
           + PG++   ++ ++  
Sbjct: 347 AAPGILTGTIIGLAQA 362



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             +++I   + +P+G+               +  I+     LAA P+ VF  L ++    
Sbjct: 226 AYMMLIVLALALPIGVAASIYLEEFAPKNRFTDLIEVNINNLAAVPSIVFGILGLAVFIN 285

Query: 444 YHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +   P        L++   T   I+    A   A P   +  A     +  +     +LP
Sbjct: 286 WFGLPRSAALVGGLVLTLMTLPTIIIATRAALRAVPPSIRWAALGLGASKTQTVFQHVLP 345

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TG I     A
Sbjct: 346 LAAPGILTGTIIGLAQA 362


>gi|313204232|ref|YP_004042889.1| phosphate ABC transporter membrane protein 2, phot family
           [Paludibacter propionicigenes WB4]
 gi|312443548|gb|ADQ79904.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Paludibacter propionicigenes WB4]
          Length = 295

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 8/183 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L   L++G I     G+        +       +    +      T   +L + V S  
Sbjct: 33  VLILFLILGFIVTKGIGVISWDF---LTKAPEEGMTKGGIFPAIVGTLCLVLGSSVFSFP 89

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A   +    +  + + +  +P + F  F +  F+N    K   + LA 
Sbjct: 90  IGIMSGIYMNEYAAGNKFATFVRIMTNNLSGVPSVVFGLFGMSLFVNTM--KFGDSILAG 147

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +SL  I +   E S +   +  Q    + +P + P ++  +++
Sbjct: 148 SLTLGLLSLPLVIRTTEESLKAIDKSYREGSLALGATKLQTIRKVIMPMAFPNIITGLIL 207

Query: 199 SMS 201
           S+ 
Sbjct: 208 SIG 210



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   V  GI   S  ++       +           +   + L++ +S+   
Sbjct: 32  VVLILFLILGFIVTKGIGVISWDFLTKA---PEEGMTKGGIFPAIVGTLCLVLGSSVFSF 88

Query: 403 PVGIWIGFRPHISSKIQPFAQLLA-------AFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           P+GI  G   +  +    FA  +          P+ VF  F + +   +    +  L  S
Sbjct: 89  PIGIMSGIYMNEYAAGNKFATFVRIMTNNLSGVPSVVFGLFGMSLFVNTMKFGDSILAGS 148

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +   +   ++        A    ++E + +   T  +  R +I+P  FP  +TG I +
Sbjct: 149 LTLGLLSLPLVIRTTEESLKAIDKSYREGSLALGATKLQTIRKVIMPMAFPNIITGLILS 208

Query: 514 CG 515
            G
Sbjct: 209 IG 210


>gi|158521938|ref|YP_001529808.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfococcus oleovorans Hxd3]
 gi|158510764|gb|ABW67731.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfococcus oleovorans Hxd3]
          Length = 294

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 5/181 (2%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +  +   ++    E      +      ++    +      T      A+  +L     
Sbjct: 34  LALFVVGYFVISNGAEAISWEFLTQPPTDSMTKGGIFPCILGTFYLAAGAICFALPIGVA 93

Query: 86  YATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            A    +    G VL  I   ++ +  +P + F  F + +F  +    V  + LA I  +
Sbjct: 94  SAVYMNEYAAKGRVLRIIRFGINNLAGVPSIVFGLFGLAFFCIVLGLGV--SLLAGILTL 151

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  +  ++L  +P D  + S +   + WQ  + + +P ++P ++   ++ +S 
Sbjct: 152 GVLTLPVIIGATEEALKAVPDDYRKASLALGATQWQTIYRVVLPAAIPEILTGAILGLSR 211

Query: 203 G 203
            
Sbjct: 212 A 212



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 8/187 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLII 395
           R + +++     VV    I    ++I +        D      +      T +     I 
Sbjct: 26  RGAAVVNGLALFVVGYFVISNGAEAISWEFLTQPPTDSMTKGGIFPCILGTFYLAAGAIC 85

Query: 396 IASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNL 450
            A  I +   +++     +  +   I+     LA  P+ VF  F L   C+        L
Sbjct: 86  FALPIGVASAVYMNEYAAKGRVLRIIRFGINNLAGVPSIVFGLFGLAFFCIVLGLGVSLL 145

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              L +   T   I+        A P+D+++ + +   T W+    ++LP   P  +TGA
Sbjct: 146 AGILTLGVLTLPVIIGATEEALKAVPDDYRKASLALGATQWQTIYRVVLPAAIPEILTGA 205

Query: 511 ITACGGA 517
           I     A
Sbjct: 206 ILGLSRA 212


>gi|27228701|ref|NP_758752.1| putative ABC transporter, ATP binding protein [Erwinia pyrifoliae]
 gi|26245295|gb|AAN04539.1| putative ABC transporter, ATP binding protein [Erwinia pyrifoliae
           Ep1/96]
          Length = 222

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 17/212 (8%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDI 106
            L  + L      T      +   + +   +               +R +  V+  ++++
Sbjct: 8   HLKRNQLCAATLETLYMTALSGGATFVLGILLGLALFLTARGGLFQNRAIYSVISVLVNV 67

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP    L   ++ F     G ++GA+ AA+ A+           +   L  + + + 
Sbjct: 68  FRSIP-FIILIVLLIPFTKTLVGTILGAD-AALPALIVGAAPFYARLVEIGLREVDKGVI 125

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E SRS         + + +P S P LV  M ++       ++A         VI   G+G
Sbjct: 126 EASRSMGARLSTLIFRVLLPESSPALVSGMTVT-------LIALVSYSAMAGVIGAGGLG 178

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +   L   +++   +      M+ VI    Q 
Sbjct: 179 NLAYLEGFQRNHGDVTLVATIMILVIVFIIQF 210



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 19/198 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++   +      ++ I +G+ +             I S I     +  + P  +   L+
Sbjct: 21  TLYMTALSGGATFVLGILLGLALFLTARGGLFQNRAIYSVISVLVNVFRSIPFIILIVLL 80

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    L  +  L  L++    +Y    V  G         E + S         
Sbjct: 81  IPFTKTLVGTILGADAALPALIVGAAPFYARL-VEIGLREVDKGVIEASRSMGARLSTLI 139

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  V+G         + S ++ V   G       GLG        + +  +
Sbjct: 140 FRVLLPESSPALVSGMTVTLIALVSYSAMAGVIGAG-------GLGNLAYLEGFQRNHGD 192

Query: 555 VVLGVLIMCCFVLALNRF 572
           V L   IM   ++ + +F
Sbjct: 193 VTLVATIMILVIVFIIQF 210


>gi|257452859|ref|ZP_05618158.1| ABC transporter permease protein [Fusobacterium sp. 3_1_5R]
 gi|317059400|ref|ZP_07923885.1| D-methionine binding transporter [Fusobacterium sp. 3_1_5R]
 gi|313685076|gb|EFS21911.1| D-methionine binding transporter [Fusobacterium sp. 3_1_5R]
          Length = 216

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 18/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPI 112
           L      T   +  +   +LL  F +  L   ++        +   VL   ++I++S P 
Sbjct: 6   LWTSTLETLYMVFFSTAFALLLGFPFGILLVITKENGLWEHLKFHQVLETSINILRSFP- 64

Query: 113 LGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
             F+   +V F ++           AAI  +       +   +  +L  +   L E S S
Sbjct: 65  --FIILMIVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIEGALLEVDSGLIEASES 122

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              S W     + +P +   L+  + +++      ++    +        L  +   I  
Sbjct: 123 MGASNWTIIRKVMIPEATSSLINGITITI----ISLIGYSSMAGAIGAGGLGDL--AIRY 176

Query: 232 AIKEQDLLAILYAMLTMLGVI 252
             +   +  + YA++ +L ++
Sbjct: 177 GYQRFQIDLMCYAIVILLIIV 197



 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 10/139 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP--------HISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V      A ++  P GI +                 ++    +L +FP  +   ++
Sbjct: 13  TLYMVFFSTAFALLLGFPFGILLVITKENGLWEHLKFHQVLETSINILRSFPFIILMIVL 72

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                V       +    + +  GT  ++   +        +   E + S   + W   R
Sbjct: 73  FPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIEGALLEVDSGLIEASESMGASNWTIIR 132

Query: 496 YIILPGIFPYYVTGAITAC 514
            +++P      + G     
Sbjct: 133 KVMIPEATSSLINGITITI 151


>gi|302518021|ref|ZP_07270363.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|302426916|gb|EFK98731.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 249

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPI 112
           L Q +  T   +  + +I++        L          ++  L  VL  +++I +S+P 
Sbjct: 10  LSQASWDTLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNIARSMP- 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG E AAI  +    +      +  ++  +   L E  +S 
Sbjct: 69  FIILMVALMGFTRWLTGTTIGRE-AAIVPLAIGAIPFYARLVETAVREVDHGLVEAVQSM 127

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + W     + VP S+P LV       S     +V           +   G+G      
Sbjct: 128 GGTTWAVVRKVLVPESLPSLV-------SSATTTIVTLIGYSAMAGTVGAGGLGDIAIRE 180

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++    +++  + +L V+    Q L
Sbjct: 181 GFQRFETGLMWVTVAILAVVISVIQFL 207



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V    +IA  + +P+G+ +             ++  +     +  + P  +    +
Sbjct: 17  TLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNIARSMPFIILMVAL 76

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     ++   +     +  L I    +Y    V        +   E   S   T W   
Sbjct: 77  MGFTRWLTGTTIGREAAIVPLAIGAIPFYARL-VETAVREVDHGLVEAVQSMGGTTWAVV 135

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +++P   P  V+ A T        S ++     G       GLG        +     
Sbjct: 136 RKVLVPESLPSLVSSATTTIVTLIGYSAMAGTVGAG-------GLGDIAIREGFQRFETG 188

Query: 555 VVLGVLIMCCFVLALNRFL 573
           ++   + +   V+++ +FL
Sbjct: 189 LMWVTVAILAVVISVIQFL 207


>gi|223043190|ref|ZP_03613237.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           capitis SK14]
 gi|314933565|ref|ZP_07840930.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           caprae C87]
 gi|222443401|gb|EEE49499.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           capitis SK14]
 gi|313653715|gb|EFS17472.1| phosphate ABC transporter, permease protein PstA [Staphylococcus
           caprae C87]
          Length = 301

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 91  AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150
           AK      ++   +  +  +P + F       F+            A   ++    V  +
Sbjct: 113 AKDNIFTSIVKISISNLAGVPSIVFGLLGYTLFVGAAGMGNSVLAAALAMSLLILPV--I 170

Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
             S  +++  +P  + E S     + WQ    + +P ++PG++   ++S+S  
Sbjct: 171 IVSSQEAIRAVPGSVREASFGLGANKWQTIRRVVLPAALPGILTGFILSLSRA 223



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           I+ +      A P   +E +       W+  R ++LP   P  +TG I +   A   +  
Sbjct: 170 IIVSSQEAIRAVPGSVREASFGLGANKWQTIRRVVLPAALPGILTGFILSLSRALGETAP 229

Query: 524 SEVASWGHIHLRTT 537
             V     I L T 
Sbjct: 230 LVVIGIPTILLATP 243


>gi|254445204|ref|ZP_05058680.1| phosphate ABC transporter, permease protein PstC, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198259512|gb|EDY83820.1| phosphate ABC transporter, permease protein PstC, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 530

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 43/225 (19%)

Query: 78  ISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM------- 124
           I+++F       AA       +++   ++ P ++ + +IP +    F +  F        
Sbjct: 299 IAMVFAVPLGVGAAIYVNQFANQKEQTLIKPYIEFISAIPSVVIGFFGIAVFGQFVREVS 358

Query: 125 --------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                   + +P         A   +    +  +      ++ N+P+  +E S +   + 
Sbjct: 359 GWAILSGFDFFPISERLTAFTAGCLLALMAIPTIFTLAEDAINNVPKSFKEASLAMGATR 418

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV---GDTVIPLP----GIGSY- 228
            Q    + VP S+ G++  +++         V  E +VV       I +P    GIG++ 
Sbjct: 419 LQTTLRIIVPTSLSGIISAILLGFGR-----VIGETMVVLLCAGNRIEIPDFTNGIGTFF 473

Query: 229 ---------IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
                    IA  + E    +I Y  L M+G++     L    M 
Sbjct: 474 EPVHTMTGIIAQELGEVVNGSIHYRALFMVGMVLFVISLFINYMA 518



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 28/214 (13%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII-IASIIWIPVGI--WIGFRPH 413
           +G+      ++       +     W G + +F   +L+  IA +  +P+G+   I     
Sbjct: 259 VGMFTALASFVFGEDWVTNSSIQDWYGIMPLFTGSLLVASIAMVFAVPLGVGAAIYVNQF 318

Query: 414 ISS----KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL--------------- 454
            +      I+P+ + ++A P+ V     ++    +    + W  L               
Sbjct: 319 ANQKEQTLIKPYIEFISAIPSVVIGFFGIAVFGQFVREVSGWAILSGFDFFPISERLTAF 378

Query: 455 ----LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
               L+       I        +  P  FKE + +   T  +    II+P      ++  
Sbjct: 379 TAGCLLALMAIPTIFTLAEDAINNVPKSFKEASLAMGATRLQTTLRIIVPTSLSGIISAI 438

Query: 511 ITACGGAWNASIVSEVASWGHIHLR--TTGLGAY 542
           +   G     ++V  + +   I +   T G+G +
Sbjct: 439 LLGFGRVIGETMVVLLCAGNRIEIPDFTNGIGTF 472


>gi|119947139|ref|YP_944819.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865743|gb|ABM05220.1| ABC transporter substrate binding inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 228

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPILGFLTFT 119
           T   + ++  +  +       +   S++        L  +L  +++I +SIP    L   
Sbjct: 27  TVAMVFASGFLGFVVGIPVGIVLHLSKKNGLLEHDLLNKILGIVVNIGRSIP-FIILLVA 85

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F     G  IG   AAI  +    +  +   +  +L  +P  L E +++      Q 
Sbjct: 86  IIPFTRFVVGTTIGT-AAAIVPLTIGAIPFIARLVEGALLEVPSGLVEAAQAMGAKPQQI 144

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
              + +P ++PG++  + +++
Sbjct: 145 ITKVLLPEALPGIINAVTITL 165



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 58/186 (31%), Gaps = 12/186 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V     +  ++ IPVGI +             ++  +     +  + P  +   + 
Sbjct: 27  TVAMVFASGFLGFVVGIPVGIVLHLSKKNGLLEHDLLNKILGIVVNIGRSIPFIILL-VA 85

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   + + +   +  +  ++    G   +I   V       P+   E A +      +  
Sbjct: 86  IIPFTRFVVGTTIGTAAAIVPLTIGAIPFIARLVEGALLEVPSGLVEAAQAMGAKPQQII 145

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  +             S ++     G +       G    ++T       
Sbjct: 146 TKVLLPEALPGIINAVTITLVTLVGYSAMAGTVGGGGLGDVGIRYGYQRFDATVMMITVV 205

Query: 555 VVLGVL 560
           +++ ++
Sbjct: 206 ILVFIV 211


>gi|33152223|ref|NP_873576.1| D-methionine transport system permease protein MetI [Haemophilus
           ducreyi 35000HP]
 gi|33148445|gb|AAP95965.1| D-methionine transport system permease protein MetI [Haemophilus
           ducreyi 35000HP]
          Length = 225

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQS 109
              + +    T     SA  I++L       LA          + R+  +L  I++I +S
Sbjct: 14  WQLIAEGTLETIYMSFSASFIAILVGLPLGFLAFLTQKEQILANERINQILNVIINIGRS 73

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P    L   ++       G  +G   AAI  +  S +         +L  IP  L E +
Sbjct: 74  MP-FIILLIILLPVTRFLVGTSLGTT-AAIVPLSVSAIPFFARLTANALIEIPAGLTEAA 131

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +S   + WQ      +P S+P L+  + +++
Sbjct: 132 KSMGATNWQVVTRFYLPESLPILINGITLTL 162



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 58/212 (27%), Gaps = 14/212 (6%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
               +   T Q    +      T++       IA ++ +P+G          I     I+
Sbjct: 2   WDSFLKEVTPQMWQLIAEGTLETIYMSFSASFIAILVGLPLGFLAFLTQKEQILANERIN 61

Query: 416 SKIQPFAQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
             +     +  + P      +  P+    V          + L +     +  L      
Sbjct: 62  QILNVIINIGRSMPFIILLIILLPVTRFLVGTSLGTTAAIVPLSVSAIPFFARL--TANA 119

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
               P    E A S   T W+      LP   P  + G           S ++     G 
Sbjct: 120 LIEIPAGLTEAAKSMGATNWQVVTRFYLPESLPILINGITLTLVALIGYSAMAGAVGGGG 179

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           +       G +      K     +++ ++++ 
Sbjct: 180 LGNLAISYGEHRNMIYVKWISTVIIVAIVMIS 211


>gi|312278639|gb|ADQ63296.1| Proline/glycine betaine ABC transporter [Streptococcus thermophilus
           ND03]
          Length = 208

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
             A+V +++            +    V + +  +M +IP           F  L P   +
Sbjct: 24  FIAIVTAIVLAIFVTIFLNFYKEFSHVTIYLFSLMYAIPSFAL-------FALLIPITGL 76

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G   A I  +  +Q + +  +    L  + + + E +++  ++ WQ    +  P +    
Sbjct: 77  GQTTAIIVLVIYAQ-YILVRTFLSGLSQVDKHVIEAAKAMGMTKWQILLKVQFPLAQKSF 135

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + +          A   I      I   G+G  +   ++  +L  +L+ ++  +G+ 
Sbjct: 136 FAGLRL-------ASTAIIAIATIGATINAGGLGVILFDGLRTMNLTKLLWGIILTVGLS 188

Query: 253 FLYDQLL 259
            L + ++
Sbjct: 189 LLTNLII 195



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            + I+ A ++ I V I++ F    S        L+ A P+   F L++            
Sbjct: 24  FIAIVTAIVLAIFVTIFLNFYKEFSHVTIYLFSLMYAIPSFALFALLIPITGLGQTT--- 80

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
              ++++   Q+ ++   ++G S       E A +  +T W+    +  P     +  G 
Sbjct: 81  -AIIVLVIYAQYILVRTFLSGLSQVDKHVIEAAKAMGMTKWQILLKVQFPLAQKSFFAGL 139

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                    AS      +     +   GLG  + +     +  +++ G+++     L  N
Sbjct: 140 RL-------ASTAIIAIATIGATINAGGLGVILFDGLRTMNLTKLLWGIILTVGLSLLTN 192

Query: 571 RFL 573
             +
Sbjct: 193 LII 195


>gi|310814591|ref|YP_003962555.1| ABC transporter permease [Ketogulonicigenium vulgare Y25]
 gi|308753326|gb|ADO41255.1| ABC transporter permease [Ketogulonicigenium vulgare Y25]
          Length = 487

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 72/455 (15%), Positives = 146/455 (32%), Gaps = 43/455 (9%)

Query: 86  YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145
            A +      L  V+V  L I+  +   G L   + +        ++    A   A+   
Sbjct: 21  LAFVVILIPLLTNVVVRSLGIVLLLAPDGILNGVLGWLGIGPFRNMLYNYGAVCIALAQV 80

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
            +  +  ++Y  L      ++E + S   S    FW +  P ++PGL   +++       
Sbjct: 81  FMPYVVLALYDVLQGTSPRVKEAAESLGASPSMVFWTVRFPMALPGLRAGIVVVFLMAST 140

Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL----YDQLLFR 261
             V++ ++  G  +      G  +           I  A+  ++ V  L       L+FR
Sbjct: 141 AYVSATILGGGRVLTS----GMLVYREAITNLSYPIAAALTLVMTVASLAFSAVVLLVFR 196

Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321
            +  W+        + +     W++        L  IG         L   +  L   L 
Sbjct: 197 KLTPWTRAGEGRANSSLPAIPVWLV------RGLDLIGPLISR--GLLVIAIILLLLPLY 248

Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381
           ++      +  Q  S + V + L  +   +  G        S+   V        + +  
Sbjct: 249 LVVMQSFNDVPQASSAKFVGFTLKWYEIVLQNGNYTAAFLNSVRLAVASTLISLAVSIPA 308

Query: 382 LGCITMFRVVVLIIIASIIWIPV---GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438
              +  +R   L  +A    +P+   G+ IG        +Q  +            P + 
Sbjct: 309 AFALVRYRFPGLNGLAVFWALPLSLPGVAIGV-----GMLQLLSIFFR------LPPFLG 357

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +  +     +SLL+             A         +E A+S    G++ +  II
Sbjct: 358 LLAVHVAIVIPFCISLLV-------------ASVLQLDRAQEEAAASLGANGFQRFFRII 404

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
           LPG+ P     +I A   ++    V+   +   + 
Sbjct: 405 LPGLAPGMAAASIMAFLTSFGEVTVTSFLTTARMT 439


>gi|302551769|ref|ZP_07304111.1| sugar transporter membrane protein [Streptomyces viridochromogenes
           DSM 40736]
 gi|302469387|gb|EFL32480.1| sugar transporter membrane protein [Streptomyces viridochromogenes
           DSM 40736]
          Length = 281

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 10/253 (3%)

Query: 19  IFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRM 72
           I  ++AF L   +++     G  E++ PR       +             +Y   + +  
Sbjct: 23  IAVVVAFPLYWMVLSAFKPAGEIESSEPRPWTLAPSLDAFRRVFGQQEFGRYFLNSLVVA 82

Query: 73  LSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
              ++ S L  F+ AT   + R RL   L+ +  I Q +P+            +      
Sbjct: 83  GCVVIASALIAFLAATAVTRFRFRLRTTLLIMFLIAQMVPVEALTIPLFFLMRDFGQLNT 142

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
           +G+ +    A        M       +  +P  LEE +     S  +  W +  P  +PG
Sbjct: 143 LGSLILPHIAFSLPFAIWMLRGF---VKAVPEALEEAAYIDGASRARFLWQILFPLVLPG 199

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           LV   + S    W   + ++  ++ DT      +   +     + D   ++ A   M   
Sbjct: 200 LVATSVFSFISAWNDFLFAKSFIISDTSQSTLPMALLVFYKPDDPDWGGVMAASTVMTIP 259

Query: 252 IFLYDQLLFRPMI 264
           + ++  L+ R ++
Sbjct: 260 VLIFFVLVQRRLV 272



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 1/166 (0%)

Query: 413 HISSKIQPFAQLLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
            + + +     +    P      PL      +  LN    L L  I  +  + ++ +   
Sbjct: 106 RLRTTLLIMFLIAQMVPVEALTIPLFFLMRDFGQLNTLGSLILPHIAFSLPFAIWMLRGF 165

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P   +E A     +  R+   I+ P + P  V  ++ +   AWN  + ++      
Sbjct: 166 VKAVPEALEEAAYIDGASRARFLWQILFPLVLPGLVATSVFSFISAWNDFLFAKSFIISD 225

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577
               T  +   +    +   +  V+    +M   VL     +   L
Sbjct: 226 TSQSTLPMALLVFYKPDDPDWGGVMAASTVMTIPVLIFFVLVQRRL 271


>gi|319792587|ref|YP_004154227.1| substrate-binding region of ABC-type glycine betaine transport
           system [Variovorax paradoxus EPS]
 gi|315595050|gb|ADU36116.1| Substrate-binding region of ABC-type glycine betaine transport
           system [Variovorax paradoxus EPS]
          Length = 518

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 13/199 (6%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
            FD++A   + G       G       +D        L    L + A +  L +  ++ I
Sbjct: 278 PFDVIARDFIAG------TGKTGAAPAQDTRRGFTAKLFGPDLWKLARQHLLLVAVSVGI 331

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
           ++L     A L     RL  V++ I  +MQ++P L  L   +     +         L A
Sbjct: 332 AILIGVPIAILVFSHVRLRAVVLGIASLMQTVPSLALLAVLISMLGAIG-------ALPA 384

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           + A+    +  +  +    L  +P  L     +  ++  Q    + +P ++P L+  +  
Sbjct: 385 LIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLQLVLLPLALPTLLAGVRT 444

Query: 199 SMSGGWFFVVASEMIVVGD 217
           + +        +  I  G 
Sbjct: 445 ATAIAIGTATIAAFIGAGG 463



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 60/145 (41%), Gaps = 3/145 (2%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V V + IA +I +P+ I +     + + +   A L+   P+     +++S +     
Sbjct: 322 LLLVAVSVGIAILIGVPIAILVFSHVRLRAVVLGIASLMQTVPSLALLAVLISMLGAIGA 381

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            P L   + +   +   I+ N + G +  PN  +   ++  +T  +  + ++LP   P  
Sbjct: 382 LPAL---IALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLQLVLLPLALPTL 438

Query: 507 VTGAITACGGAWNASIVSEVASWGH 531
           + G  TA   A   + ++     G 
Sbjct: 439 LAGVRTATAIAIGTATIAAFIGAGG 463


>gi|260881365|ref|ZP_05404215.2| D-methionine ABC transporter, permease protein [Mitsuokella
           multacida DSM 20544]
 gi|260849204|gb|EEX69211.1| D-methionine ABC transporter, permease protein [Mitsuokella
           multacida DSM 20544]
          Length = 213

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T   ++ +M+++ +       L          +S  +  V+  I++ ++SIP 
Sbjct: 5   LSKALGETVYMVVVSMIVATIIGVPLGVLLHTTSKGQILESPAVNRVVGAIVNAVRSIP- 63

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AA+  +  + +  +   +  SL  +P  L E ++S 
Sbjct: 64  FIILLVAIIPFTRLLVGTAIGTT-AAMVPLVIAAIPFIGRQVETSLKEVPFGLVEAAQSM 122

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             +  Q  W + +P SM  +V  +
Sbjct: 123 GATPAQIIWKVLLPESMSSIVAQL 146



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 74/210 (35%), Gaps = 19/210 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ VVV +I+A+II +P+G+         I   P ++  +      + + P  +   + 
Sbjct: 12  TVYMVVVSMIVATIIGVPLGVLLHTTSKGQILESPAVNRVVGAIVNAVRSIPFIILL-VA 70

Query: 438 VSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +   +   +   +  +  M+        +I   V       P    E A S   T  +  
Sbjct: 71  IIPFTRLLVGTAIGTTAAMVPLVIAAIPFIGRQVETSLKEVPFGLVEAAQSMGATPAQII 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP      V    T        S ++     G +       G        +   PE
Sbjct: 131 WKVLLPESMSSIVAQLTTVIISLVGESAMAGAVGGGGLGDLAIRYGY-------QRFRPE 183

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           ++L  +I+   ++ L +F+ + L     + 
Sbjct: 184 IMLATVIILIVLVQLVQFVGNTLAKRLDKR 213


>gi|116250280|ref|YP_766118.1| component of ABC transporter [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254928|emb|CAK06002.1| putative component of ABC transporter [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 249

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P     +SL   A+     ++ ++V S +   +      +        +   + +  Q+ 
Sbjct: 40  PAVYTQNSLASLAAGHLQLVIGSIVCSAVLAVIGGIFVTRESGADFLPLSRAVANAGQTF 99

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V               +  + A+F   +  +  +    L  +   + + + 
Sbjct: 100 PPVAVLALAVPA--------TGFGAMPTLIALFLYGLLPIFENTVAGLKQVSPQVLDAAD 151

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++G Q+ + + +P ++P ++  + ++        V +       + +   G+G  I 
Sbjct: 152 GMGMNGTQRLFRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVII 204

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   +   IL   L +  +  L    +
Sbjct: 205 AGLISDNTAFILQGGLIVGLMAVLIYDAM 233



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANVF 433
            +  L    +  V+  I+ ++++ +  GI++       +   P ++ +A     FP    
Sbjct: 47  SLASLAAGHLQLVIGSIVCSAVLAVIGGIFV--TRESGADFLPLSRAVANAGQTFPPVAV 104

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L V    +  +   + L L  +      I  N +AG         + A    + G + 
Sbjct: 105 LALAVPATGFGAMPTLIALFLYGLL----PIFENTVAGLKQVSPQVLDAADGMGMNGTQR 160

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G   A       ++++   +     +   GLG  I       +  
Sbjct: 161 LFRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVIIAGLISDNTA 213

Query: 554 EVVLGVLIMCCFVLAL 569
            ++ G LI+    + +
Sbjct: 214 FILQGGLIVGLMAVLI 229


>gi|328544895|ref|YP_004305004.1| phosphate ABC transporter permease PstA [polymorphum gilvum
           SL003B-26A1]
 gi|326414637|gb|ADZ71700.1| Phosphate ABC transporter, permease protein PstA [Polymorphum
           gilvum SL003B-26A1]
          Length = 432

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 7/191 (3%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  L    S +   +L   ++S       A      A   R+  ++   ++ + ++P +
Sbjct: 206 ELAGLAGAISGSFWALLVCFLLSFPAGIAAAIYLEEFAPKNRITDLIEVNINNLAAVPSV 265

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+ L+ G    A L     +    +  +      SL ++P  + E +    
Sbjct: 266 VFGLLGLAVFLGLF-GLPRSAPLVGGMVLALMTLPTIIIVTRASLKSVPSSIREAALGIG 324

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233
            S  +   +  +P SMP ++   ++ ++       A  +++  +  I  P  G  +  A 
Sbjct: 325 ASKHETIIHHILPLSMPTILTGTIIGLAQA-LGETAPLLLIGMNAFITSPTTG--VLEAS 381

Query: 234 KEQDLLAILYA 244
                   ++A
Sbjct: 382 TALPTQIFIWA 392



 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 19/223 (8%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---A 422
           ++     + ++  +      + + ++V  +++    I   I++      +          
Sbjct: 197 FLNADSRFPELAGLAGAISGSFWALLVCFLLSFPAGIAAAIYLEEFAPKNRITDLIEVNI 256

Query: 423 QLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             LAA P+ VF      + +         P +   +L +  T   I+    A   + P+ 
Sbjct: 257 NNLAAVPSVVFGLLGLAVFLGLFGLPRSAPLVGGMVLALM-TLPTIIIVTRASLKSVPSS 315

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH-IHLRTT 537
            +E A     +      + ILP   P  +TG I     A   +    +      I   TT
Sbjct: 316 IREAALGIGASKHETIIHHILPLSMPTILTGTIIGLAQALGETAPLLLIGMNAFITSPTT 375

Query: 538 GLGA---------YIA-ESTEKGSFPEVVLGVLIMCCFVLALN 570
           G+           +I  +S E+G        +L++  F+LA+N
Sbjct: 376 GVLEASTALPTQIFIWADSPERGFVARTSAAILVLLGFLLAMN 418


>gi|315648814|ref|ZP_07901909.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus vortex V453]
 gi|315275782|gb|EFU39134.1| phosphate ABC transporter, inner membrane subunit PstC
           [Paenibacillus vortex V453]
          Length = 244

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 82/224 (36%), Gaps = 18/224 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIPILGF----LTF 118
               L    I++LF        A         R+  V+ P+L+++  +P + +    L  
Sbjct: 21  LGGTLLITGIAVLFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVPTIVYGYFALET 80

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
              +   ++P   I   L+A   +    +  ++     ++  +P+ L   + +   + ++
Sbjct: 81  VTPFLQKIFPNMGIFNALSAGIVVGIMILPMISSLSEDAMRAVPKSLRHGAYALGATRFE 140

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI-------GSYIAL 231
               + +P ++ G+V + +++ S      +   +       + L  +          + +
Sbjct: 141 VALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLESIQTMTSYIVQV 200

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW-SNKFRLER 274
           ++ +     I Y  +  +G+       L   +  W + +FR E 
Sbjct: 201 SMGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFREEY 244



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 23/222 (10%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF------- 433
           +   +++  IA +  +P+G+             +   ++P  ++LA  P  V+       
Sbjct: 21  LGGTLLITGIAVLFAVPIGLACAIYLNEYAPARVRGVVKPVLEVLAGVPTIVYGYFALET 80

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             P +        +   L   +++       I         A P   +  A +   T + 
Sbjct: 81  VTPFLQKIFPNMGIFNALSAGIVVGIMILPMISSLSEDAMRAVPKSLRHGAYALGATRFE 140

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL------GAYIAES 546
               I+LP      V+  + A   A   +++  VA+     L    L       +YI + 
Sbjct: 141 VALKIVLPAALSGVVSSFVLAFSRAIGETMIVTVAAGATPQLTLNPLESIQTMTSYIVQV 200

Query: 547 TEKGSFPE--VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           +  G  P   +  G +      L +  FL + L  +  R  R
Sbjct: 201 S-MGDVPRGTIEYGTIFAVGLTLFVITFLLNILAQWVARRFR 241


>gi|291521346|emb|CBK79639.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [Coprococcus catus GD/7]
          Length = 294

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 96/245 (39%), Gaps = 17/245 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + V+G +   +       +  D+  +   + +V  +P     T +  + A++I++  
Sbjct: 40  IITIGVLGYLIFYILIKGVPNLSPDLFSLTYTSENVSMIPA-IINTLIMTILALLIAVPL 98

Query: 83  TFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
               A    +  + G  LV ++ +    +  IP + +  F +++F+     K   + LA 
Sbjct: 99  GIFSAIYMVEYAKKGNKLVGVVSVTTETLAGIPSIVYGLFGMLFFVTYCHWKY--SILAG 156

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            F +    + ++  +  ++L ++P    E S        +  + + +P ++PG++  +++
Sbjct: 157 AFTLSIMILPSIMRTTQEALLSVPDSFREGSYGLGAGKLRTVFRIVLPSAIPGILAGIIL 216

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGS---------YIALAIKEQDLLAILYAMLTML 249
           ++        A+ +   G        + S         Y+          A   A++ ++
Sbjct: 217 AIGRI-VGETAALIFTAGTVPDIAKNLMSSGRTLAVHMYVLSGEGLHTDQAYATAVMLLV 275

Query: 250 GVIFL 254
            VI +
Sbjct: 276 VVIII 280



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 16/263 (6%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
           R    +          +  +  I    V+  +   I  + +  +                
Sbjct: 18  RLKAYKRSKLSFLLAVLVLLSAIITIGVLGYLIFYILIKGVPNLSPDLFSLTYTSENVSM 77

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFP 435
              +   +++ I+A +I +P+GI+              +   +    + LA  P+ V+  
Sbjct: 78  IPAIINTLIMTILALLIAVPLGIFSAIYMVEYAKKGNKLVGVVSVTTETLAGIPSIVYGL 137

Query: 436 LVVSCVSYY-HLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRW 493
             +     Y H   ++      +       +         + P+ F+E +        R 
Sbjct: 138 FGMLFFVTYCHWKYSILAGAFTLSIMILPSIMRTTQEALLSVPDSFREGSYGLGAGKLRT 197

Query: 494 WRYIILPGIFPYYVTGAITACGGA----WNASIVSEVASWGHIHLRTTG--LGAYIAEST 547
              I+LP   P  + G I A G            +        +L ++G  L  ++   +
Sbjct: 198 VFRIVLPSAIPGILAGIILAIGRIVGETAALIFTAGTVPDIAKNLMSSGRTLAVHMYVLS 257

Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570
            +G   +      +M   V+ + 
Sbjct: 258 GEGLHTDQAYATAVMLLVVVIII 280


>gi|259505989|ref|ZP_05748891.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium efficiens YS-314]
 gi|259166470|gb|EEW51024.1| phosphate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium efficiens YS-314]
          Length = 298

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           + A  LV  ++  ++       +  D        + +      A+   +  +   VI+ +
Sbjct: 35  IAAIPLVW-VLWTVISRGLGPILTVDWWTTSQQGILLQLPGGGAAHAIIGTMVQAVITSV 93

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +       A          RLG +   ++DI+  +P +    F    ++ L+     G 
Sbjct: 94  VSIPIGIFTAIYLVEYANGNRLGRITTFMVDILTGVPSIVAALFIYSMWIVLFGFDRSGL 153

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            ++    I    V  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V 
Sbjct: 154 AVSLSLVILMVPV--IIRNTEEMLRVVPHDLREASYALGVPKWKTIAKIVLPTALSGIVT 211

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 212 GVMLAIA 218



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 30/258 (11%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----------TMFRVVV 392
           +L      +     + + W  I   +      D       G +           +   +V
Sbjct: 27  VLIYGAMFIAAIPLVWVLWTVISRGLGPILTVDWWTTSQQGILLQLPGGGAAHAIIGTMV 86

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSY 443
             +I S++ IP+GI+             +         +L   P+     F   +  V +
Sbjct: 87  QAVITSVVSIPIGIFTAIYLVEYANGNRLGRITTFMVDILTGVPSIVAALFIYSMWIVLF 146

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 L +SL ++      I+ N        P+D +E + +  +  W+    I+LP   
Sbjct: 147 GFDRSGLAVSLSLVILMVPVIIRNTEEMLRVVPHDLREASYALGVPKWKTIAKIVLPTAL 206

Query: 504 PYYVTGAITACGGAWNASIV-------SEVASWGHIHLRTTGLGAYIAESTEKGSFP--- 553
              VTG + A       S         ++  +W       + L   + +  + G+ P   
Sbjct: 207 SGIVTGVMLAIARIMGESAPVLVLVGSTQATNWDPTTGPQSSLPLMMLDMYKAGTAPATL 266

Query: 554 -EVVLGVLIMCCFVLALN 570
            ++    L +   +LALN
Sbjct: 267 DKLWGAALTLVLIILALN 284


>gi|289424233|ref|ZP_06426016.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289426641|ref|ZP_06428370.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|289154930|gb|EFD03612.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289160136|gb|EFD08311.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|313765499|gb|EFS36863.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA1]
 gi|313802526|gb|EFS43748.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA2]
 gi|313806541|gb|EFS45048.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA2]
 gi|313815099|gb|EFS52813.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA1]
 gi|313817408|gb|EFS55122.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA2]
 gi|313821849|gb|EFS59563.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA1]
 gi|313824257|gb|EFS61971.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA2]
 gi|313826621|gb|EFS64335.1| ABC transporter, permease protein [Propionibacterium acnes
           HL063PA1]
 gi|314915859|gb|EFS79690.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA4]
 gi|314917135|gb|EFS80966.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA1]
 gi|314921410|gb|EFS85241.1| ABC transporter, permease protein [Propionibacterium acnes
           HL050PA3]
 gi|314926663|gb|EFS90494.1| ABC transporter, permease protein [Propionibacterium acnes
           HL036PA3]
 gi|314931267|gb|EFS95098.1| ABC transporter, permease protein [Propionibacterium acnes
           HL067PA1]
 gi|314954909|gb|EFS99315.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA1]
 gi|314958842|gb|EFT02944.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA1]
 gi|314961133|gb|EFT05234.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA2]
 gi|314964441|gb|EFT08541.1| ABC transporter, permease protein [Propionibacterium acnes
           HL082PA1]
 gi|314969539|gb|EFT13637.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA1]
 gi|314980386|gb|EFT24480.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA2]
 gi|314987225|gb|EFT31316.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA2]
 gi|314988884|gb|EFT32975.1| ABC transporter, permease protein [Propionibacterium acnes
           HL005PA3]
 gi|315078546|gb|EFT50577.1| ABC transporter, permease protein [Propionibacterium acnes
           HL053PA2]
 gi|315081990|gb|EFT53966.1| ABC transporter, permease protein [Propionibacterium acnes
           HL078PA1]
 gi|315082513|gb|EFT54489.1| ABC transporter, permease protein [Propionibacterium acnes
           HL027PA2]
 gi|315086225|gb|EFT58201.1| ABC transporter, permease protein [Propionibacterium acnes
           HL002PA3]
 gi|315087808|gb|EFT59784.1| ABC transporter, permease protein [Propionibacterium acnes
           HL072PA1]
 gi|315099890|gb|EFT71866.1| ABC transporter, permease protein [Propionibacterium acnes
           HL059PA2]
 gi|315101800|gb|EFT73776.1| ABC transporter, permease protein [Propionibacterium acnes
           HL046PA1]
 gi|315110243|gb|EFT82219.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA2]
 gi|327333461|gb|EGE75181.1| proline/glycine betaine ABC transporter, permease protein
           [Propionibacterium acnes HL096PA3]
 gi|327445516|gb|EGE92170.1| ABC transporter, permease protein [Propionibacterium acnes
           HL013PA2]
 gi|327454677|gb|EGF01332.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA3]
 gi|327456751|gb|EGF03406.1| ABC transporter, permease protein [Propionibacterium acnes
           HL083PA2]
 gi|327456978|gb|EGF03633.1| ABC transporter, permease protein [Propionibacterium acnes
           HL092PA1]
 gi|328755733|gb|EGF69349.1| ABC transporter, permease protein [Propionibacterium acnes
           HL087PA1]
 gi|328756513|gb|EGF70129.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA2]
 gi|328758759|gb|EGF72375.1| ABC transporter, permease protein [Propionibacterium acnes
           HL020PA1]
 gi|332674803|gb|AEE71619.1| ABC transporter-associated permease [Propionibacterium acnes 266]
          Length = 215

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 21/219 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   +  ++ +++SLL +      A ++R    +LVP   +L  + S+
Sbjct: 6   ISENWDQIWQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVLLPLIL--------GTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              +      I   ++  L +  ++D ++    R +  W
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLTPW 209



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F L+   +    L+P   +  L ++G   
Sbjct: 37  PLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVVALTLYGIAL 96

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +         +     +  A +   +  + +  + LP   P  V G         +   
Sbjct: 97  LVRTAT-DAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLSLVS 155

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 156 VGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFD 196


>gi|255281907|ref|ZP_05346462.1| phosphate ABC transporter, permease protein PstA [Bryantella
           formatexigens DSM 14469]
 gi|255267580|gb|EET60785.1| phosphate ABC transporter, permease protein PstA [Bryantella
           formatexigens DSM 14469]
          Length = 271

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 74/182 (40%), Gaps = 6/182 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ---YASRTTLRMLSAMVIS 79
           + F +++ +I  +L        P  +      + +V  LP        T L +L A+ + 
Sbjct: 16  ITFAVLLFLIAYILIKGIPNLKPS-LFAWNYTSENVSMLPAIINTIYMTALALLIAVPLG 74

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +         A+K      V+    + +  IP + +  F +++F+      +  + L+  
Sbjct: 75  IFSAIYLVEYASKKNPFINVIRLTTETLSGIPSIVYGLFGMLFFVTALKWGL--SLLSGA 132

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +    + ++  +  ++L  +P    E S        +  + + +P ++PG++  ++++
Sbjct: 133 FTLSIMVLPSIMRTTEEALKAVPDSYREGSFGLGAGKLRTVFRIVLPAAVPGILSGVILA 192

Query: 200 MS 201
           + 
Sbjct: 193 IG 194



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 10/177 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
           F V+  +   I  + I  +       +           +   + +  +A +I +P+GI+ 
Sbjct: 18  FAVLLFLIAYILIKGIPNLKPSLFAWNYTSENVSMLPAIINTIYMTALALLIAVPLGIFS 77

Query: 409 GFR-PHISSKIQPFAQLLA-------AFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIF 458
                  +SK  PF  ++          P+ V+  F ++    +       L  +  +  
Sbjct: 78  AIYLVEYASKKNPFINVIRLTTETLSGIPSIVYGLFGMLFFVTALKWGLSLLSGAFTLSI 137

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
                I+        A P+ ++E +        R    I+LP   P  ++G I A G
Sbjct: 138 MVLPSIMRTTEEALKAVPDSYREGSFGLGAGKLRTVFRIVLPAAVPGILSGVILAIG 194


>gi|116620327|ref|YP_822483.1| binding-protein-dependent transporter inner membrane component
           [Candidatus Solibacter usitatus Ellin6076]
 gi|116223489|gb|ABJ82198.1| binding-protein-dependent transport systems inner membrane
           component [Candidatus Solibacter usitatus Ellin6076]
          Length = 230

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
           +I Q+IP L         F+   P      +  AI A+    +  +  +    +  +   
Sbjct: 78  NIAQTIPSLALF-----GFLVPLPWIGGIGKRTAIVALCLYALLPILRNTLLGILGVDAG 132

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           + E + +  ++  Q  W + +P + P +V  + ++
Sbjct: 133 VRESAVAMGMTERQILWEVELPLAAPSIVAGLRLA 167



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           FA +    P+   F  +V       +     +  L        IL N + G        +
Sbjct: 76  FANIAQTIPSLALFGFLVPLPWIGGIGKRTAIVAL-CLYALLPILRNTLLGILGVDAGVR 134

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           E A +  +T  +    + LP   P  V G   A
Sbjct: 135 ESAVAMGMTERQILWEVELPLAAPSIVAGLRLA 167


>gi|315923873|ref|ZP_07920101.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622713|gb|EFV02666.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 297

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS------RRLGMVLVPILDIMQSIP 111
             +         L  +     +++       L A        +RL   L P +D++  IP
Sbjct: 68  PGNNLYGILPMILASICVTAGAIVIGVPIGLLTAIFMACFCPKRLYRFLKPGVDLLAGIP 127

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
            + +  F +   + +      GA    LAA   +    +  +      ++  +P    E 
Sbjct: 128 SVVYGFFGLQVVVPIIRSTAGGAGACMLAACIILGVMILPTIIAMSEAAIRAVPPAYYEG 187

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP---LPGI 225
           S     +  +  + + VP +  G+   +++ +       +A  M+     VIP     G+
Sbjct: 188 SLGLGATPERSVFKVVVPAARSGIFAGVILGVGRAIGETMAVIMVAGNQAVIPGGLFMGL 247

Query: 226 GSYIAL-----AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
            +  A                L A   +L V  L   L F  +    ++
Sbjct: 248 RTMTANIVLEMGYASGLHREALIATAAVLFVFILLINLGFNLLKRRDDR 296



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 26/198 (13%)

Query: 397 ASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVS 442
           A +I +P+G+             +   ++P   LLA  P+ V+         P++ S   
Sbjct: 89  AIVIGVPIGLLTAIFMACFCPKRLYRFLKPGVDLLAGIPSVVYGFFGLQVVVPIIRSTAG 148

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                      +L +      I+    A   A P  + E +     T  R    +++P  
Sbjct: 149 GAGACMLAACIILGVMI-LPTIIAMSEAAIRAVPPAYYEGSLGLGATPERSVFKVVVPAA 207

Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK----------GSF 552
                 G I   G A   ++   + + G+  +   GL   +   T               
Sbjct: 208 RSGIFAGVILGVGRAIGETMAVIMVA-GNQAVIPGGLFMGLRTMTANIVLEMGYASGLHR 266

Query: 553 PEVVLGVLIMCCFVLALN 570
             ++    ++  F+L +N
Sbjct: 267 EALIATAAVLFVFILLIN 284


>gi|242398155|ref|YP_002993579.1| ABC-type sulfate transport system, permease component [Thermococcus
           sibiricus MM 739]
 gi|242264548|gb|ACS89230.1| ABC-type sulfate transport system, permease component [Thermococcus
           sibiricus MM 739]
          Length = 248

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 73/187 (39%), Gaps = 3/187 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           + L   + M+ISL F      + A+    G      +  +  +PI+   +   +  +  +
Sbjct: 55  SLLTSTATMLISLFFGVPLGYILARKEFKGK---SFVQAVVDVPIVIPHSVVGIMLLVTF 111

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K++ + L  I A+          +       +   LE V+R+   S  + F+ + +P 
Sbjct: 112 SNKILDSYLGIIMAMLFVSAPFTINAARDGFLAVDEKLEHVARTLGASKLRAFFTISLPM 171

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
           +M  ++   +M+ +     V A  +I        +  +  +    ++    ++++  +L+
Sbjct: 172 AMSSILSGAIMTWARAISEVGAILIISYYPKTAQILVMEYFNNYGLRASRPISVILVLLS 231

Query: 248 MLGVIFL 254
           +   + L
Sbjct: 232 LSIFVIL 238



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 83/221 (37%), Gaps = 2/221 (0%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
             ++  + + ++ Q   + +   T +D L +I L   ++      ++I+    +P+G  +
Sbjct: 19  LYILLPLVVIVSKQLFDWEMLMRTLKDELVLIAL-RNSLLTSTATMLISLFFGVPLGYIL 77

Query: 409 GFRPHISS-KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
             +       +Q    +    P +V   +++   S   L+  L + + M+F +  + +  
Sbjct: 78  ARKEFKGKSFVQAVVDVPIVIPHSVVGIMLLVTFSNKILDSYLGIIMAMLFVSAPFTINA 137

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
              G  A     + VA +   +  R +  I LP      ++GAI     A +      + 
Sbjct: 138 ARDGFLAVDEKLEHVARTLGASKLRAFFTISLPMAMSSILSGAIMTWARAISEVGAILII 197

Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           S+     +   +  +            V+L +L +  FV+ 
Sbjct: 198 SYYPKTAQILVMEYFNNYGLRASRPISVILVLLSLSIFVIL 238


>gi|325662615|ref|ZP_08151215.1| molybdate ABC transporter [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471112|gb|EGC74338.1| molybdate ABC transporter [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 234

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 24/208 (11%)

Query: 77  VISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--------- 126
           V++ + +F     AA KS + G  L  +LD + ++P++  L  TV  F  L         
Sbjct: 24  VVATVISFFLGIYAARKSVQAGPRLKAVLDGILTLPMV--LPPTVAGFFLLLIFSVRRPF 81

Query: 127 -------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
                  +  KV+ +    + A        M  +   +   I  +L   +R+  +S ++ 
Sbjct: 82  GAFLYGNFDIKVVQSWAGCVIAATVIAFPLMYRNARAAFEQIDINLIHAARTLGMSEFRI 141

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-L 238
           FW + +P + PG+    +++ +       A+ M+  G+       I   IA+ I++ D L
Sbjct: 142 FWTVVMPTAGPGVTAGTILAFARALGEYGATSMLA-GNIPGKTGTISQKIAMVIQDGDYL 200

Query: 239 LAILYAMLTML---GVIFLYDQLLFRPM 263
            A ++  + M+   G+IF+ + +L R M
Sbjct: 201 TAGVWVGIVMVIAFGMIFVLNLVLGRRM 228



 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 70/212 (33%), Gaps = 9/212 (4%)

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK-IQ 419
           W+ +   +       V+            V     + +++   + + +   P ++   + 
Sbjct: 13  WRPLWISMKTGVVATVISFFLGIYAARKSVQAGPRLKAVLDGILTLPMVLPPTVAGFFLL 72

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
               +   F A ++    +  V  +         +         +  N  A       + 
Sbjct: 73  LIFSVRRPFGAFLYGNFDIKVVQSWA-----GCVIAATVIAFPLMYRNARAAFEQIDINL 127

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
              A +  ++ +R +  +++P   P    G I A   A      + + + G+I  +T  +
Sbjct: 128 IHAARTLGMSEFRIFWTVVMPTAGPGVTAGTILAFARALGEYGATSMLA-GNIPGKTGTI 186

Query: 540 GAYIAESTEKGSF--PEVVLGVLIMCCFVLAL 569
              IA   + G +    V +G++++  F +  
Sbjct: 187 SQKIAMVIQDGDYLTAGVWVGIVMVIAFGMIF 218


>gi|260767250|ref|ZP_05876191.1| methionine ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260617758|gb|EEX42936.1| methionine ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|315180880|gb|ADT87794.1| ABC-type metal ion transport system, permease component [Vibrio
           furnissii NCTC 11218]
          Length = 225

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
           ++L+   L     +T   +  A ++          +   +++        L  VL  I++
Sbjct: 10  LSLNSDLLLMATWQTVYMVAVAGIVGFALGIPLGVILHTTKKGGLLENTQLNNVLGAIVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    +  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKMLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P +MP ++ ++ +++
Sbjct: 128 IEAAQSMGATPMQIITKVLLPEAMPTILNSVTITL 162



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  I+   + IP+G+ +             +++ +     +  + P  V     
Sbjct: 24  TVYMVAVAGIVGFALGIPLGVILHTTKKGGLLENTQLNNVLGAIVNIGRSVPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P    E A S   T  + 
Sbjct: 84  IPVTKMLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALLEVPTGLIEAAQSMGATPMQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  +           + S ++     G +       G +  + T      
Sbjct: 142 ITKVLLPEAMPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDVT------ 195

Query: 554 EVVLGVLIMCCFVL 567
            ++   ++M   ++
Sbjct: 196 -IMAVTVVMLIVLV 208


>gi|227511126|ref|ZP_03941175.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227523312|ref|ZP_03953361.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227085608|gb|EEI20920.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227089503|gb|EEI24815.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 295

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++  ++IS              A +     ++   ++++ S+P +    F  +
Sbjct: 62  LFNSLYLLVLTLIISFPIALGSGIYLSEYAPNNWFTSLIRTAIEVLSSLPSVVVGLFGYL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +   V  + LA   A+    +  +T S+ +SL ++P    E   S  LS W+   
Sbjct: 122 VFVIKFD--VGFSILAGAIALTFFNLPLLTRSIEESLEDVPDLQREAGLSLGLSRWKTIT 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            +  P ++PG++  +++S  
Sbjct: 180 GIVFPAALPGILTGIILSAG 199



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 15/144 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF---RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442
           +++ +V+ +II+  I +  GI++         +S I+   ++L++ P+     +VV    
Sbjct: 65  SLYLLVLTLIISFPIALGSGIYLSEYAPNNWFTSLIRTAIEVLSSLPS-----VVVGLFG 119

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWR 495
           Y        +   ++ G      FN+     +            +E   S  ++ W+   
Sbjct: 120 YLVFVIKFDVGFSILAGAIALTFFNLPLLTRSIEESLEDVPDLQREAGLSLGLSRWKTIT 179

Query: 496 YIILPGIFPYYVTGAITACGGAWN 519
            I+ P   P  +TG I + G  + 
Sbjct: 180 GIVFPAALPGILTGIILSAGRVFG 203


>gi|152977720|ref|YP_001343349.1| binding-protein-dependent transport systems inner membrane
           component [Actinobacillus succinogenes 130Z]
 gi|150839443|gb|ABR73414.1| binding-protein-dependent transport systems inner membrane
           component [Actinobacillus succinogenes 130Z]
          Length = 229

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 10/137 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPILGFL 116
              T     +A   ++LF       A  +++        +   L  I++I +S+P    L
Sbjct: 25  TWETLYMTFAATFFAILFGLPLGIWAFLTKKGYALNNTKINRTLEVIINIGRSVP-FIIL 83

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++       G  IG   AAI  +  + +  +      +L ++P  L E +R+   S 
Sbjct: 84  LLILLPVTKFLVGTTIGTT-AAIIPLSVAALPFVARLTVNALGDVPSGLTETARAMGTST 142

Query: 177 WQKFWYLGVPFSMPGLV 193
           WQ      +P ++P L+
Sbjct: 143 WQLVTKFYLPEALPMLI 159



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 43/149 (28%), Gaps = 10/149 (6%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQP 420
              T +    ++     T++        A +  +P+GIW              I+  ++ 
Sbjct: 11  TQMTPEIWDLILVSTWETLYMTFAATFFAILFGLPLGIWAFLTKKGYALNNTKINRTLEV 70

Query: 421 FAQLLAAFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              +  + P  +   +++                 + +      ++    +      P+ 
Sbjct: 71  IINIGRSVPFIILLLILLPVTKFLVGTTIGTTAAIIPLSVAALPFVARLTVNALGDVPSG 130

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYV 507
             E A +   + W+      LP   P  +
Sbjct: 131 LTETARAMGTSTWQLVTKFYLPEALPMLI 159


>gi|153802293|ref|ZP_01956879.1| ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|153827041|ref|ZP_01979708.1| ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|254285578|ref|ZP_04960542.1| ABC transporter, permease protein [Vibrio cholerae AM-19226]
 gi|124122175|gb|EAY40918.1| ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|149739082|gb|EDM53378.1| ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|150424440|gb|EDN16377.1| ABC transporter, permease protein [Vibrio cholerae AM-19226]
          Length = 225

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A  +          +   +++        L  VL  +++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRVLGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 58/191 (30%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +   +   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRVLGAVVNIGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +          I     +     +
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITIM 197

Query: 556 VLGVLIMCCFV 566
            + V+++   V
Sbjct: 198 AVTVVMLIVLV 208


>gi|146308138|ref|YP_001188603.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
 gi|145576339|gb|ABP85871.1| binding-protein-dependent transport systems inner membrane
           component [Pseudomonas mendocina ymp]
          Length = 242

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFL 116
            SL     R  L +  A  +++L       L  +S  R    +   +  I Q+ P +  L
Sbjct: 43  ASLAALLGRHLLIVACAGGLAVLLGVTAGILVTRSWGRDFLPLASQVASIGQTFPPVAVL 102

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
             +V               L  I A+    +  +  +    L  +P  + E +R   +S 
Sbjct: 103 ALSVPLLG--------FGALPTIVALLLYGLLPVLRNSLAGLQGVPPAVLEAARGMGMSP 154

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            +  W + +P + P ++  +   ++       A+    VG + +  P
Sbjct: 155 LRVLWQVELPLARPVILAGVRTCLTLS--IATAALGSTVGASTLGDP 199



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 10/132 (7%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF----PANVFFPLVVSCVS 442
           +  V     +A ++ +  GI +           P A  +A+     P      L V  + 
Sbjct: 53  LLIVACAGGLAVLLGVTAGILV--TRSWGRDFLPLASQVASIGQTFPPVAVLALSVPLLG 110

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L   + L L  +         N +AG    P    E A    ++  R    + LP  
Sbjct: 111 FGALPTIVALLLYGLLPVL----RNSLAGLQGVPPAVLEAARGMGMSPLRVLWQVELPLA 166

Query: 503 FPYYVTGAITAC 514
            P  + G  T  
Sbjct: 167 RPVILAGVRTCL 178


>gi|317500642|ref|ZP_07958861.1| hypothetical protein HMPREF1026_00804 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316897960|gb|EFV20012.1| hypothetical protein HMPREF1026_00804 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 197

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 15/187 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L+A V + +   +     ++ ++    ++ I +I  +IP +  L   +            
Sbjct: 10  LTAAVSAGIIGLLLEIFISEHKKAAGPVLTIANIGYTIPAISLLGMLIPVLGIG------ 63

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
             +  AI A+    +  M  + Y  +  +  ++   +     + +Q    + +P +   +
Sbjct: 64  --DKTAITALTIYGIMPMVRNTYAGITGVGEEVVAAAEGMGSTRFQIMTKIKLPLAAGVI 121

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
           +  +          VV +  +    + I   G+G  I   I   D          +  + 
Sbjct: 122 IAGVR-------NMVVMTISVSAIASFIGAGGLGVAIYRGITIYDSAMTFCGSFLIALLA 174

Query: 253 FLYDQLL 259
            + D LL
Sbjct: 175 IVSDLLL 181



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 11/183 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   + A II + + I+I      +  +   A +    PA     +++  +         
Sbjct: 10  LTAAVSAGIIGLLLEIFISEHKKAAGPVLTIANIGYTIPAISLLGMLIPVLGIGDKTAIT 69

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            L++  I      ++ N  AG +    +    A     T ++    I LP      + G 
Sbjct: 70  ALTIYGIM----PMVRNTYAGITGVGEEVVAAAEGMGSTRFQIMTKIKLPLAAGVIIAGV 125

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                   N  +++   S     +   GLG  I              G  ++    +  +
Sbjct: 126 R-------NMVVMTISVSAIASFIGAGGLGVAIYRGITIYDSAMTFCGSFLIALLAIVSD 178

Query: 571 RFL 573
             L
Sbjct: 179 LLL 181


>gi|291532219|emb|CBL05332.1| phosphate ABC transporter membrane protein 1, PhoT family (TC
           3.A.1.7.1) [Megamonas hypermegale ART12/1]
          Length = 301

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 16/202 (7%)

Query: 74  SAMVISLLFTFVYATLA--AKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLY 127
            A++IS  F+   A             +L P ++I   IP + +    LT  V +  +L+
Sbjct: 88  LALLISTPFSIASAIFMTEISPGIGRKILQPAVEIFVGIPSVVYGWIGLTILVPFIKDLF 147

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
             K   + LAA   +       +T     ++ +IP+   + S     + WQ    + +P 
Sbjct: 148 DLKFGFSVLAAGIVLAVMIYPTITSLSADAIRSIPKSFRQASYGLGATRWQTISQVVIPA 207

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV----------GDTVIPLPGIGSYIALAIKEQD 237
           S  GL+  +++ ++  +   +A  M++             T      I S +  A++  +
Sbjct: 208 SKSGLMTAIVLGLARAFGEALAVAMVIGKMKAFPESLLSPTTNLTAAIASDMGGAMEGSE 267

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
               L++M  +L +I L    +
Sbjct: 268 YNIALWSMALLLFIISLVFIFI 289



 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 60/171 (35%), Gaps = 14/171 (8%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGF-----RPHI-SSKIQPFAQLLAAFPANVFFPL 436
             I +F  ++   +A +I  P  I          P I    +QP  ++    P+ V+  +
Sbjct: 75  AAIFIFGSIITCALALLISTPFSIASAIFMTEISPGIGRKILQPAVEIFVGIPSVVYGWI 134

Query: 437 VVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHI 488
            ++ +  +           ++  + +++    +  + ++      + P  F++ +     
Sbjct: 135 GLTILVPFIKDLFDLKFGFSVLAAGIVLAVMIYPTITSLSADAIRSIPKSFRQASYGLGA 194

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           T W+    +++P      +T  +     A+  ++   +          + L
Sbjct: 195 TRWQTISQVVIPASKSGLMTAIVLGLARAFGEALAVAMVIGKMKAFPESLL 245


>gi|266624655|ref|ZP_06117590.1| maltose transport system permease protein MalG [Clostridium
           hathewayi DSM 13479]
 gi|288863483|gb|EFC95781.1| maltose transport system permease protein MalG [Clostridium
           hathewayi DSM 13479]
          Length = 347

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 13/182 (7%)

Query: 73  LSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGF-LTFTVVYFMNLYPG 129
           L  ++ISL    +     A+   +    + V +L I++  P++G  +   ++        
Sbjct: 153 LYTILISLGIGSLAGFAMARFQFKFKEQIHVSLL-IVRMFPVVGISIPMAMLLIQFGLFD 211

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             IG  L           W +T S++     I ++LEE S  F  +  Q F  + +P + 
Sbjct: 212 TRIGLALLYSVPNIALTAW-ITNSIFIG---INKELEEASMIFGANSVQTFAKITLPLAF 267

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           P L  + M S    W   +++ ++   +  + L      +  AI          A  +++
Sbjct: 268 PALAASSMYSFLTAWNDTISALILTNKNQTLSL-----VVYKAIGTTSSGIQYAAAGSIV 322

Query: 250 GV 251
            +
Sbjct: 323 LI 324



 Score = 37.2 bits (85), Expect = 8.7,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 5/181 (2%)

Query: 391 VVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVF-FPLVVSCVSYYHLNP 448
           +  I+I+  I    G  +         +I     ++  FP      P+ +  + +   + 
Sbjct: 153 LYTILISLGIGSLAGFAMARFQFKFKEQIHVSLLIVRMFPVVGISIPMAMLLIQFGLFDT 212

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
            + L+LL          +   +       + +E +  F     + +  I LP  FP    
Sbjct: 213 RIGLALLYSVPNIALTAWITNSIFIGINKELEEASMIFGANSVQTFAKITLPLAFPALAA 272

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
            ++ +   AWN +I + + +  +  L    L  Y A  T          G +++    L 
Sbjct: 273 SSMYSFLTAWNDTISALILTNKNQTLS---LVVYKAIGTTSSGIQYAAAGSIVLILPALV 329

Query: 569 L 569
            
Sbjct: 330 F 330


>gi|256825846|ref|YP_003149806.1| carbohydrate ABC transporter membrane protein [Kytococcus
           sedentarius DSM 20547]
 gi|256689239|gb|ACV07041.1| carbohydrate ABC transporter membrane protein [Kytococcus
           sedentarius DSM 20547]
          Length = 289

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 2/193 (1%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L A VIS+    + A   ++ +  G  +  IL    ++     ++     F       + 
Sbjct: 90  LLATVISVALATLCAYAISRLKFPGKGM--ILFTALTVSFFPVVSLVTPIFNVWRTIGLF 147

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
                 +    +  +    +++      IP ++E+ ++    + WQ F  + VP ++PG+
Sbjct: 148 DTIPGLVIPYLSLTLPLAIWTLTAFFQQIPWEMEQAAQVDGATSWQAFRKVIVPLALPGV 207

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
               ++     W   V +  +           +  +   +  +Q   AI  A + +   +
Sbjct: 208 FTTAIIVFFTAWNDFVFAVSLSSEQARTVPAALAFFTGASQFQQPTGAIAAASVIVTIPV 267

Query: 253 FLYDQLLFRPMIV 265
            +   L  R ++ 
Sbjct: 268 VILVLLFQRQIVA 280



 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 1/149 (0%)

Query: 428 FPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
           FP      P+     +    +    L +  +  T    ++ + A     P + ++ A   
Sbjct: 128 FPVVSLVTPIFNVWRTIGLFDTIPGLVIPYLSLTLPLAIWTLTAFFQQIPWEMEQAAQVD 187

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             T W+ +R +I+P   P   T AI     AWN  + +   S          L  +   S
Sbjct: 188 GATSWQAFRKVIVPLALPGVFTTAIIVFFTAWNDFVFAVSLSSEQARTVPAALAFFTGAS 247

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
             +     +    +I+   V+ L      
Sbjct: 248 QFQQPTGAIAAASVIVTIPVVILVLLFQR 276


>gi|227489460|ref|ZP_03919776.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227541056|ref|ZP_03971105.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227090638|gb|EEI25950.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227183316|gb|EEI64288.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 303

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 74/186 (39%), Gaps = 8/186 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD--VHSLPQYAS-RTTLRMLSAMVI 78
           L    L+  + ++  +G    T        +   +        ++A   T +++     +
Sbjct: 40  LAMIPLIWVLFDVFRYGFPVITQADWWTKDMSQAMAILPGGGAKHAIIGTFVQVAITSAL 99

Query: 79  SLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+      A    +     RLG V   ++DI+  +P +    F   +++ L+     G  
Sbjct: 100 SIPIGIFTAIYLVEYSQGGRLGRVTTFMVDILTGVPSIVAALFIYSFWVVLFGFDRSGMA 159

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           ++    I    V  +  +  + L  +P+ L E S +  +  W+    + +P ++ G+V  
Sbjct: 160 VSLALVILMVPV--IIRNTEEMLRVVPQGLREASYALGVPKWKTIAKIVLPTALSGIVTG 217

Query: 196 MMMSMS 201
           +M++++
Sbjct: 218 VMLAIA 223



 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 17/200 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPAN--VFFPLVVSC 440
           T  +V +   ++  I I   I++        +         +L   P+     F      
Sbjct: 89  TFVQVAITSALSIPIGIFTAIYLVEYSQGGRLGRVTTFMVDILTGVPSIVAALFIYSFWV 148

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           V +      + +SL ++      I+ N        P   +E + +  +  W+    I+LP
Sbjct: 149 VLFGFDRSGMAVSLALVILMVPVIIRNTEEMLRVVPQGLREASYALGVPKWKTIAKIVLP 208

Query: 501 GIFPYYVTGAITA----CGGAWNASIVSEV---ASWGHIHLRTTGLGAYIAESTEKGSFP 553
                 VTG + A     G +    I+  +    +W       + L  ++ E  + GS  
Sbjct: 209 TALSGIVTGVMLAIARVMGESAPVLILVGMTSSVNWNAFDGNQSSLPLFMLEMYKSGSSG 268

Query: 554 EVV-----LGVLIMCCFVLA 568
            ++       + ++    + 
Sbjct: 269 PMMDRMWGAALTLIILIGVL 288


>gi|149198229|ref|ZP_01875276.1| ABC-type uncharacterized transport system, permease component
           [Lentisphaera araneosa HTCC2155]
 gi|149138831|gb|EDM27237.1| ABC-type uncharacterized transport system, permease component
           [Lentisphaera araneosa HTCC2155]
          Length = 400

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 12/213 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQ 423
           ++    T +D+L  +  G  I +   ++L+I+  +I + VG  +G         +Q   +
Sbjct: 173 FLGTDDTGRDILAQLSYGYRIAILFALMLLIVNYVIGVAVGCAMGYLGSWYDLIMQRIIE 232

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-----LMIFGTQWYILFNVIAGASAFPND 478
           +L+  P      ++ + +         W  +         G  WY+     A       +
Sbjct: 233 VLSNIPFLYIIIIIAAVLRAQGFTMGFWAMIGIYASFGWMGLTWYMR---TATLKEKARE 289

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           +   A +   +  R     I+P +    VT A  +  G+       +   +G +      
Sbjct: 290 YVLAARACGASKTRIVFKHIIPNVISLLVTFAPFSISGSIIGLTSLDFLGYG-LPKDYPS 348

Query: 539 LGAYIAESTEKGSFPEVVLGVLI-MCCFVLALN 570
            G  I   T+    P +V  +++ M   +  +N
Sbjct: 349 WGGLIKVGTDNIQSPWIVTSIVVAMVLVLFLIN 381



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 11/194 (5%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
               + ++   VI +        L +      +++  I++++ +IP L ++   +   + 
Sbjct: 196 LFALMLLIVNYVIGVAVGCAMGYLGS---WYDLIMQRIIEVLSNIPFL-YIIIIIAAVLR 251

Query: 126 LYPGKVIGAELAAIFAIF--TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                +    +  I+A F      W M  +    L    R+    +R+   S  +  +  
Sbjct: 252 AQGFTMGFWAMIGIYASFGWMGLTWYMRTAT---LKEKAREYVLAARACGASKTRIVFKH 308

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P  +  LV     S+SG    + + + +  G      P  G  I +         I+ 
Sbjct: 309 IIPNVISLLVTFAPFSISGSIIGLTSLDFLGYGLPK-DYPSWGGLIKVGTDNIQSPWIVT 367

Query: 244 AM-LTMLGVIFLYD 256
           ++ + M+ V+FL +
Sbjct: 368 SIVVAMVLVLFLIN 381


>gi|14520371|ref|NP_125846.1| anion transport system permease protein [Pyrococcus abyssi GE5]
 gi|74576664|sp|Q9V2C1|WTPB_PYRAB RecName: Full=Molybdate/tungstate transport system permease protein
           wtpB
 gi|5457586|emb|CAB49077.1| Transport system permease protein, substrate unknown [Pyrococcus
           abyssi GE5]
          Length = 248

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 90/231 (38%), Gaps = 9/231 (3%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
           F++V   + I++   ++    R +V  +   L + +L      + L   +  +ISLLF  
Sbjct: 17  FLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEAL----RNSLLTATATALISLLFGV 72

Query: 85  VYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
               + A+   R   ++  I+D+   IP        +V F N       G   A +F   
Sbjct: 73  PLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSYKGIIAAMLFVSA 132

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +     S       +   LE V+R+   S  + F+ + +P ++P +    +M+ + G
Sbjct: 133 PFAI----NSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARG 188

Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
              V A  ++        +  +  +    ++    ++++   +++   + L
Sbjct: 189 ISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVL 239



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 79/227 (34%), Gaps = 2/227 (0%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +       +   + +    Q++ + +   T  D L VI     ++       +I+ +  +
Sbjct: 14  LGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPL-VIEALRNSLLTATATALISLLFGV 72

Query: 403 PVGIWIGFRPHISS-KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           P+G  +  +       +Q    +    P +V   +++   S   L+    +   M+F + 
Sbjct: 73  PLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSYKGIIAAMLFVSA 132

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
            + + +   G  A     + VA +   +  R +  I LP   P   +GAI A     +  
Sbjct: 133 PFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEV 192

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
               + ++     +   +  +            V+L  + +  FV+ 
Sbjct: 193 GAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVL 239


>gi|326801906|ref|YP_004319725.1| ABC transporter transmembrane protein [Sphingobacterium sp. 21]
 gi|326552670|gb|ADZ81055.1| ABC-type transporter, integral membrane subunit [Sphingobacterium
           sp. 21]
          Length = 218

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T +    +             L           +R+L  V+  I+++ +SIP 
Sbjct: 9   LLKGTWETIVMTFVSGFFGFCLGLPTGVLLFMTREEQMLANRKLNRVIAVIVNVFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG   AA+  +       +   +   L  +P  L E +R+ 
Sbjct: 68  FIILIVWMIPFTRLVVGTSIGVG-AALVPLSIGAAPFIARMIENCLLEVPHGLVEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
                Q    + +P ++P ++ +  +++
Sbjct: 127 GAKPIQVVRKVLLPEALPAIINSASITL 154



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 12/152 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAA 427
           +L ++     T+    V       + +P G+ +             ++  I     +  +
Sbjct: 6   LLMLLKGTWETIVMTFVSGFFGFCLGLPTGVLLFMTREEQMLANRKLNRVIAVIVNVFRS 65

Query: 428 FPAN---VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            P     V+       V    +     L  L I G   +I   +       P+   E A 
Sbjct: 66  IPFIILIVWMIPFTRLVVGTSIGVGAALVPLSI-GAAPFIARMIENCLLEVPHGLVEAAR 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
           +      +  R ++LP   P  +  A      
Sbjct: 125 AMGAKPIQVVRKVLLPEALPAIINSASITLIT 156


>gi|323359396|ref|YP_004225792.1| glycine/betaine ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323275767|dbj|BAJ75912.1| ABC-type proline/glycine betaine transport systems, permease
           component [Microbacterium testaceum StLB037]
          Length = 226

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A     + L A+V   + +     +A + R +   ++ I  ++ +IP L  L    V   
Sbjct: 15  ALVHLRQSLIALVAGFILSIPIGWVAWRYRLVRSSVITITGLLYTIPSLALLILVPVI-- 72

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                  I +E   I A+    V  +  ++   L ++   + + S +     +++FW + 
Sbjct: 73  --TGWYSIISENNLIVALAIYAVAILVRAVADGLDSVDAGVRQASTAIGYGSFRRFWAVE 130

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
            P + P ++  + ++ +          ++ + +       +G      ++ + +  +   
Sbjct: 131 FPLAGPVVLAGLRVTSASTIALATVGILVGIQN-------LGYLFTNGLQRRIIPEVFAG 183

Query: 245 MLTMLGVIFLYDQLL---FRPMIVWS 267
           ++ ++ +  + D LL    R ++ W+
Sbjct: 184 VIAVVVLALVIDLLLVFAGRLLMPWT 209



 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 7/192 (3%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L  + + + ++ ++   I+ IP+G        + S +     LL   P+     LV    
Sbjct: 14  LALVHLRQSLIALVAGFILSIPIGWVAWRYRLVRSSVITITGLLYTIPSLALLILVPVIT 73

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
            +Y +     L + +       ++  V  G  +     ++ +++     +R +  +  P 
Sbjct: 74  GWYSIISENNLIVALAIYAVAILVRAVADGLDSVDAGVRQASTAIGYGSFRRFWAVEFPL 133

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  + G           + V  +    +       LG       ++   PEV  GV+ 
Sbjct: 134 AGPVVLAGLRVTSASTIALATVGILVGIQN-------LGYLFTNGLQRRIIPEVFAGVIA 186

Query: 562 MCCFVLALNRFL 573
           +    L ++  L
Sbjct: 187 VVVLALVIDLLL 198


>gi|313793025|gb|EFS41092.1| ABC transporter, permease protein [Propionibacterium acnes
           HL110PA1]
          Length = 215

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 21/219 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   +  ++ +++SLL +      A ++R    +LVP   +L  + S+
Sbjct: 6   ISENWDQIWQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVLLPLIL--------GTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRNAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              +      I   ++  L +  ++D ++    R +  W
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLTPW 209



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F L+   +    L+P   +  L ++G   
Sbjct: 37  PLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVVALTLYGIAL 96

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +         +     +  A +   +  + +  + LP   P  V G         +   
Sbjct: 97  LVRTAT-DAFDSVGRSVRRNAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLSLVS 155

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 156 VGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFD 196


>gi|320009482|gb|ADW04332.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptomyces flavogriseus ATCC 33331]
          Length = 362

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 20/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           T  ++  A VIS     + A    +     L   +   +D+M  IP +  G    +++  
Sbjct: 149 TLEQVGIATVISAPLGLLTAVYLVEYGKGTLAKAVTFFVDVMTGIPSIVAGLFILSIMLI 208

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            ++ P  ++GA    I  I       +  S  + L  +P +L E S +  +  W+    +
Sbjct: 209 GSIEPSGLMGALALTILMIPV-----VVRSTEEMLKLVPNELREASLALGIPKWRTILKV 263

Query: 184 GVPFSMPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALAI--- 233
            +P ++ G+   +M++++            V  S++I           +  YI       
Sbjct: 264 VLPTAIGGITTGVMLAIARIAGETAPIILLVFGSQLINSNPFEGAQSSLPFYIYEQYKIG 323

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           +         A L ++  + + + L+ R +  W
Sbjct: 324 EAASYDRAWAAALVLIAFVMILN-LVARGIARW 355



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 97/290 (33%), Gaps = 21/290 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  S   F  +S     +       +     + + +C    V  +  + W  +  G   
Sbjct: 61  WGLISALLFLAISYVATTVVENQRQAKDRLATSIVWVCFLVAVVPLASLLWTTISRGSER 120

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------ 411
              +     +      +    V      T+ +V     IA++I  P+G+           
Sbjct: 121 LDGYFLSHSMAGVLGSEASGGVYHALIGTLEQV----GIATVISAPLGLLTAVYLVEYGK 176

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIA 470
             ++  +  F  ++   P+ V    ++S +    + P+  +  L +      ++  +   
Sbjct: 177 GTLAKAVTFFVDVMTGIPSIVAGLFILSIMLIGSIEPSGLMGALALTILMIPVVVRSTEE 236

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
                PN+ +E + +  I  WR    ++LP       TG + A       +    +  +G
Sbjct: 237 MLKLVPNELREASLALGIPKWRTILKVVLPTAIGGITTGVMLAIARIAGETAPIILLVFG 296

Query: 531 HIHLRT-------TGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALN 570
              + +       + L  YI E  + G   S+       L++  FV+ LN
Sbjct: 297 SQLINSNPFEGAQSSLPFYIYEQYKIGEAASYDRAWAAALVLIAFVMILN 346


>gi|281412970|ref|YP_003347049.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
 gi|281374073|gb|ADA67635.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga naphthophila RKU-10]
          Length = 264

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 4/193 (2%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVV 121
           +    +    L ++ IS L          +    G  ++ +  +M +SIP++      VV
Sbjct: 62  KATLVSVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVV 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +M             A  ++    V  +T S++  +     + EE    F LS +Q F 
Sbjct: 122 LYMRFNLADTTLGVALAHASMILPFVVLITSSVFSGISV---EYEEAGMVFGLSRFQAFI 178

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++PGL  + + +    W  V AS ++ + +  +P   + + +A     +     
Sbjct: 179 RITLPLALPGLAASAIFAFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGT 238

Query: 242 LYAMLTMLGVIFL 254
           + A+  M+ + F+
Sbjct: 239 IMAVPAMVFIFFI 251



 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 9/241 (3%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLI 394
           + L   +F V+  +     + +   I       + LY +++         +++   ++ I
Sbjct: 16  WFLTPVFFIVLASLTPSSDYYNPSRIFPSSLTLEHLYKLFVTLGGGKATLVSVQVALISI 75

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSYYHLNPNLWL 452
            I+ ++ +P G  +         I   + L+  + P  V   PLVV  + +   +  L +
Sbjct: 76  GISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMRFNLADTTLGV 135

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L        +++    +  S    +++E    F ++ ++ +  I LP   P     AI 
Sbjct: 136 ALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPLALPGLAASAIF 195

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   +WN    S + +  +  L    L   +A           ++ V  M          
Sbjct: 196 AFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGTIMAVPAMVFIFFIRKYL 255

Query: 573 L 573
           +
Sbjct: 256 V 256


>gi|83814271|ref|YP_446398.1| phosphate ABC transporter, permease protein PstC [Salinibacter
           ruber DSM 13855]
 gi|294508335|ref|YP_003572393.1| ABC-type phosphate transport system, permease component
           [Salinibacter ruber M8]
 gi|83755665|gb|ABC43778.1| phosphate ABC transporter, permease protein PstC [Salinibacter
           ruber DSM 13855]
 gi|294344663|emb|CBH25441.1| ABC-type phosphate transport system, permease component
           [Salinibacter ruber M8]
          Length = 321

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTF 118
               L   VIS +        +A       S+ +  VL P L+++  +P + +    LTF
Sbjct: 98  LAGTLLVTVISAVVALPVGLASAIFISEYASKWVRKVLKPSLELLAGVPTVVYGYFALTF 157

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                  + PG  +   L+A   +    +  +      +L  +P  L + + +   + ++
Sbjct: 158 VTPLLQTVVPGLGVYNALSAGIVVGIMIIPMVASLSEDALQAVPDSLSQAAYALGATKYE 217

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
               + VP +  G++ + ++++S  
Sbjct: 218 TVVRVNVPAAFSGIMASFILAVSRA 242



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 28/256 (10%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L I    V+  +          +              +     +   +++ +I++++ +P
Sbjct: 55  LGIAAVLVIESIPFFQTVALTEFFGTAQWTPQFSEKHFGIWALLAGTLLVTVISAVVALP 114

Query: 404 VGIWIGF------RPHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPN 449
           VG+             +   ++P  +LLA  P  V+         PL+ + V    +   
Sbjct: 115 VGLASAIFISEYASKWVRKVLKPSLELLAGVPTVVYGYFALTFVTPLLQTVVPGLGVYNA 174

Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L   +++       +         A P+   + A +   T +     + +P  F   +  
Sbjct: 175 LSAGIVVGIMIIPMVASLSEDALQAVPDSLSQAAYALGATKYETVVRVNVPAAFSGIMAS 234

Query: 510 AITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAESTEKGSFPE-------VV 556
            I A   A   +++  +A+                + A+I + + KG  P+       + 
Sbjct: 235 FILAVSRAIGETMIVTLAAGATPKATLDPTQSIQTMTAFIVQVS-KGDTPQGTIVYQSIF 293

Query: 557 LGVLIMCCFVLALNRF 572
              L++    LALN F
Sbjct: 294 AVGLVLFLITLALNIF 309


>gi|282855594|ref|ZP_06264909.1| D-methionine transport system permease protein MetI [Pyramidobacter
           piscolens W5455]
 gi|282586577|gb|EFB91830.1| D-methionine transport system permease protein MetI [Pyramidobacter
           piscolens W5455]
          Length = 228

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQS 109
            + +      T + ++ + V+++ F  +   +   +          +  VL  + DI++S
Sbjct: 19  PNVILPAILDTLVMVVGSAVLAIFFGILLGVVLILTDKDGLSPHPVIYAVLGRLTDIVRS 78

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
            P++  L   +     +  G  +G   AAIFAI        T     SL  +   L + +
Sbjct: 79  FPMM-ILIVAIAPLTRMVIGTKVGVR-AAIFAITIGSTPFATRMTENSLRTVDPKLVKAA 136

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           ++F  S  Q  + + +  ++P LV N  +
Sbjct: 137 KAFGASKLQIIFKVMMVEALPSLVSNFTI 165



 Score = 38.0 bits (87), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 43/146 (29%), Gaps = 14/146 (9%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           ++     T+  VV   ++A    I +G+ +           P I + +     ++ +FP 
Sbjct: 22  ILPAILDTLVMVVGSAVLAIFFGILLGVVLILTDKDGLSPHPVIYAVLGRLTDIVRSFPM 81

Query: 431 NVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            +      PL    +              +  G+  +                 + A +F
Sbjct: 82  MILIVAIAPLTRMVIGTKVG--VRAAIFAITIGSTPFATRMTENSLRTVDPKLVKAAKAF 139

Query: 487 HITGWRWWRYIILPGIFPYYVTGAIT 512
             +  +    +++    P  V+    
Sbjct: 140 GASKLQIIFKVMMVEALPSLVSNFTI 165


>gi|182414363|ref|YP_001819429.1| phosphate ABC transporter, inner membrane subunit PstA [Opitutus
           terrae PB90-1]
 gi|177841577|gb|ACB75829.1| phosphate ABC transporter, inner membrane subunit PstA [Opitutus
           terrae PB90-1]
          Length = 346

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L ++ +M I+L      A      A+  R    +   +  +  +P + F  F    F+
Sbjct: 121 TVLLVVGSMTIALALGVCAAIYLNEYARDSRRIRFVRLAIVNLAGVPSIVFGLFGFGLFV 180

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 V  + LA  F +    +  +  +  +SL  +P+   E + +   + WQ      
Sbjct: 181 IFLGWNV--SLLAGWFTLAFMVLPVVITASEESLKAVPKGFREGALALGATKWQTIRKNV 238

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P+++PG++ + ++ ++
Sbjct: 239 LPYALPGILTSSILGIA 255



 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 11/146 (7%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF 433
             +      T+  VV  + IA  + +   I++            ++     LA  P+ VF
Sbjct: 112 GGIFPAIAGTVLLVVGSMTIALALGVCAAIYLNEYARDSRRIRFVRLAIVNLAGVPSIVF 171

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHI 488
               +     + +     +SLL  + T  +++  V+  A      A P  F+E A +   
Sbjct: 172 ---GLFGFGLFVIFLGWNVSLLAGWFTLAFMVLPVVITASEESLKAVPKGFREGALALGA 228

Query: 489 TGWRWWRYIILPGIFPYYVTGAITAC 514
           T W+  R  +LP   P  +T +I   
Sbjct: 229 TKWQTIRKNVLPYALPGILTSSILGI 254


>gi|16265113|ref|NP_437905.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307309463|ref|ZP_07589119.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
 gi|15141252|emb|CAC49765.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|306900048|gb|EFN30668.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti BL225C]
          Length = 299

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + + ++SL  +   A    + R  G   V +L  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTILSLAASVFAAYAIERVRFTGARPVGLLIFLAYLVPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  ++LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKF----GIYDSKLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGATRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTVPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 ALMAGALFGSLPVVILYSFFV 286



 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 12/166 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            I Y++   +Y   L+       TM   V   I++    +     I       ++     
Sbjct: 79  HIKYLLFETSYPGWLWN------TMLVAVGSTILSLAASVFAAYAIERVRFTGARPVGLL 132

Query: 423 QLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPND 478
             LA    P+ +F PL      +   +  L L              L        + P +
Sbjct: 133 IFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLLMGYF--RSIPFE 190

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            +E A     T W+    IILP   P  ++  I A   +WN  I +
Sbjct: 191 LEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|259910333|ref|YP_003208065.1| Binding-protein-dependent transport system protein, inner membrane
           component [Erwinia pyrifoliae Ep1/96]
 gi|258683155|emb|CAX53407.1| Binding-protein-dependent transport system protein, inner membrane
           component [Erwinia pyrifoliae Ep1/96]
          Length = 222

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 17/212 (8%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDI 106
            L +  L      T      +   + +   +               +R +  V+  ++++
Sbjct: 8   HLKLDQLCAATLETLYMTALSGGATFVLGILLGLALFLTARGGLFQNRAIYSVISVLVNV 67

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP    L   ++ F     G ++GA+ AA+ A+           +   L  + + + 
Sbjct: 68  FRSIP-FIILIVLLIPFTKTLVGTILGAD-AALPALIVGAAPFYARLVEIGLREVDKGVI 125

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E SRS         + + +P S P LV  M ++       ++A         VI   G+G
Sbjct: 126 EASRSMGARLSTLIFRVLLPESSPALVSGMTVT-------LIALVSYSAMAGVIGAGGLG 178

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +   L   +++   +      M+ VI    Q 
Sbjct: 179 NLAYLEGFQRNHGDVTLVATIMILVIVFIIQF 210



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 19/198 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++   +      ++ I +G+ +             I S I     +  + P  +   L+
Sbjct: 21  TLYMTALSGGATFVLGILLGLALFLTARGGLFQNRAIYSVISVLVNVFRSIPFIILIVLL 80

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    L  +  L  L++    +Y    V  G         E + S         
Sbjct: 81  IPFTKTLVGTILGADAALPALIVGAAPFYARL-VEIGLREVDKGVIEASRSMGARLSTLI 139

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  V+G         + S ++ V   G       GLG        + +  +
Sbjct: 140 FRVLLPESSPALVSGMTVTLIALVSYSAMAGVIGAG-------GLGNLAYLEGFQRNHGD 192

Query: 555 VVLGVLIMCCFVLALNRF 572
           V L   IM   ++ + +F
Sbjct: 193 VTLVATIMILVIVFIIQF 210


>gi|227506384|ref|ZP_03936433.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
 gi|227197035|gb|EEI77083.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
          Length = 303

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    LV  +  +   G      P          LD  +    A    +      +++ L
Sbjct: 40  LAMIPLVWVLWELFSRGAGAILTPEWWTLSQRGILDTEA-GGGALHAIIGTFVQTILATL 98

Query: 82  FTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +       A       +   L  +   ++DI+  +P +    F    ++ L+  +  G 
Sbjct: 99  ISVPIGIFTAIYLVEYSRGGLLSRLTTFMVDILSGVPSIVAALFVFAMWITLFGFERSGM 158

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            +A    +    +  +  +  + L  +P DL E S +  +  W+    + +P ++ G+V 
Sbjct: 159 AVALSLVLLMIPI--VVRNTEEMLRVVPMDLREASYALGVPKWKTIARIVLPTALSGIVT 216

Query: 195 NMMMSMS 201
            +M++++
Sbjct: 217 GIMLAVA 223



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 21/191 (10%)

Query: 345 DIFWFCVVCGVA--IGIAWQSIGYIVNHFTYQDVLYVIWLGCIT----------MFRVVV 392
            I W  ++  +   + + W+            +   +   G +           +    V
Sbjct: 32  IIVWATMILAMIPLVWVLWELFSRGAGAILTPEWWTLSQRGILDTEAGGGALHAIIGTFV 91

Query: 393 LIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSY 443
             I+A++I +P+GI+             +S        +L+  P+     F   +    +
Sbjct: 92  QTILATLISVPIGIFTAIYLVEYSRGGLLSRLTTFMVDILSGVPSIVAALFVFAMWITLF 151

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                 + ++L ++      ++ N        P D +E + +  +  W+    I+LP   
Sbjct: 152 GFERSGMAVALSLVLLMIPIVVRNTEEMLRVVPMDLREASYALGVPKWKTIARIVLPTAL 211

Query: 504 PYYVTGAITAC 514
              VTG + A 
Sbjct: 212 SGIVTGIMLAV 222


>gi|323697501|ref|ZP_08109413.1| phosphonate ABC transporter, inner membrane subunit [Desulfovibrio
           sp. ND132]
 gi|323457433|gb|EGB13298.1| phosphonate ABC transporter, inner membrane subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 279

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 19/201 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL----VPILDIMQSIPILGFLTFTV 120
              T    L   V  + F+ V   LA KS+    VL      ++ + +++P L +  F V
Sbjct: 88  LLETLQMALVGTVFGVAFSLVLGILACKSQSPNKVLYFLSRNLIALFRTVPDLIWALFFV 147

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           V               A   AI    +        +++  + +  +E   +   S     
Sbjct: 148 VMVGLG--------PFAGTLAIMVDTMGFCGRFFAEAMEEVDKGPQEALEALGASRLGTV 199

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
               +P ++P  V   + S+       V   ++  G       GIG  + +++       
Sbjct: 200 ICAVIPAALPSFVNTALFSLEKATRSSVVLGLVGAG-------GIGIELKVSMDMFMYSE 252

Query: 241 ILYAMLTMLGVIFLYDQLLFR 261
               +L +  ++   +QL  R
Sbjct: 253 ASTIILLIFVLVLAVEQLSSR 273



 Score = 38.8 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 85/266 (31%), Gaps = 26/266 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV---CGVAIGIAWQSIGYIVNHFT--YQD 375
                  P  F +  +     Y   + +F V       ++        YIV+  +  +  
Sbjct: 17  AADPALLPIRFPRPSALAFALYAAGLAFFVVSMRNINFSLAEFVHGFPYIVDLVSEMFPP 76

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAA 427
            L  +    +++   + + ++ ++  +   + +G            +    +    L   
Sbjct: 77  SLRRVDAVALSLLETLQMALVGTVFGVAFSLVLGILACKSQSPNKVLYFLSRNLIALFRT 136

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSL-LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
            P  ++    V  V        L + +  M F  +++                +E   + 
Sbjct: 137 VPDLIWALFFVVMVGLGPFAGTLAIMVDTMGFCGRFF-----AEAMEEVDKGPQEALEAL 191

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546
             +        ++P   P +V  A+ +   A  +S+V  +   G       G+G  +  S
Sbjct: 192 GASRLGTVICAVIPAALPSFVNTALFSLEKATRSSVVLGLVGAG-------GIGIELKVS 244

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            +   + E    +L++   VLA+ + 
Sbjct: 245 MDMFMYSEASTIILLIFVLVLAVEQL 270


>gi|291445067|ref|ZP_06584457.1| sugar transporter membrane protein [Streptomyces roseosporus NRRL
           15998]
 gi|291348014|gb|EFE74918.1| sugar transporter membrane protein [Streptomyces roseosporus NRRL
           15998]
          Length = 277

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 4/203 (1%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVV 121
           +Y   + L   + +++S L  F+ AT   + R +    L+ +  + Q +P+         
Sbjct: 69  RYFLNSLLVAGTVVILSALIAFLAATAVTRFRFKFRTTLLIMFLVAQMVPVEALTIPLFF 128

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +      +G+ +    A        M       +  +P  LEE +     S  +  W
Sbjct: 129 LMRDFGQLNTLGSLILPHLAFSLPFAIWMLRGF---VKAVPEALEEAAYIDGASRTRFLW 185

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            +  P   PGLV   + S    W   + ++  ++ DT      +   +     E D   I
Sbjct: 186 QILFPLVFPGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPDENDWGGI 245

Query: 242 LYAMLTMLGVIFLYDQLLFRPMI 264
           + A   M   + ++  L+ R ++
Sbjct: 246 MAASTVMTIPVLVFFVLVQRRLV 268



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 65/194 (33%), Gaps = 2/194 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVF-FPLVVSCVSY 443
           ++     ++I++++I       +        + +     +    P      PL      +
Sbjct: 74  SLLVAGTVVILSALIAFLAATAVTRFRFKFRTTLLIMFLVAQMVPVEALTIPLFFLMRDF 133

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             LN    L L  +  +  + ++ +     A P   +E A     +  R+   I+ P +F
Sbjct: 134 GQLNTLGSLILPHLAFSLPFAIWMLRGFVKAVPEALEEAAYIDGASRTRFLWQILFPLVF 193

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  V  ++ +    WN  + ++          T  +   +    ++  +  ++    +M 
Sbjct: 194 PGLVATSVFSFITTWNDFLFAKSFIISDTSQSTLPMALLVFFKPDENDWGGIMAASTVMT 253

Query: 564 CFVLALNRFLWHPL 577
             VL     +   L
Sbjct: 254 IPVLVFFVLVQRRL 267


>gi|260427185|ref|ZP_05781164.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260421677|gb|EEX14928.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 271

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 7/227 (3%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSL 61
            L   +   I       +A  L+  +   L   +    +P +I  I        L  +  
Sbjct: 5   RLDGLVRHLILAGFSASIALPLLWVLRVSLTDKLTAYRLPPEIGQIGLHNFVEVLTQYDF 64

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            ++   +    + A  ISL    + A   A+ R  G  L+ ++   Q IP +  +    +
Sbjct: 65  TRWFGNSVFVAVLATAISLPAAAMMAYATARYRTGGWPLMMMVLSSQMIPPIVLVLPMFL 124

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  L P   I A   A  AI    +  +  S +       R LEE +R    + WQ F 
Sbjct: 125 VFTTLMPVPGIIAITIAHVAINLPFMAWIMISFFDEDT---RSLEEAARCDGATRWQAFT 181

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
            + +P +MPG++   ++     W   + + ++    +     G+ S 
Sbjct: 182 RVTIPVAMPGIIAAGLLGFILSWNEFLYALILGNHSSQTLAVGLASL 228



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 5/116 (4%)

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND---FKEVA 483
             P  V   ++   + +  L P   +  + I      + F      S F  D    +E A
Sbjct: 112 MIPPIVL--VLPMFLVFTTLMPVPGIIAITIAHVAINLPFMAWIMISFFDEDTRSLEEAA 169

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
                T W+ +  + +P   P  +   +     +WN  + + +           GL
Sbjct: 170 RCDGATRWQAFTRVTIPVAMPGIIAAGLLGFILSWNEFLYALILGNHSSQTLAVGL 225


>gi|253997058|ref|YP_003049122.1| phosphate ABC transporter inner membrane subunit PstC
           [Methylotenera mobilis JLW8]
 gi|253983737|gb|ACT48595.1| phosphate ABC transporter, inner membrane subunit PstC
           [Methylotenera mobilis JLW8]
          Length = 315

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 71/192 (36%), Gaps = 10/192 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           +L    ++GI+    +G  E     D +     T    +            L+   ++LL
Sbjct: 45  VLTTAAIVGILLYESYGFFEFVPVSDFLTDTVWTPLFENPRYGILPLVSGTLTVTGVALL 104

Query: 82  FTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKV 131
                 T++A       S R+   + P+L+++  +P + F    L F       + PG  
Sbjct: 105 IAVPIGTISAIYLSEFASHRVRETIKPVLELLAGVPTIVFGFFALLFITPLLQKIMPGLP 164

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               L++   I    +  +      ++  +P  + E S +   + +Q    +  P ++ G
Sbjct: 165 TFNMLSSGIVIGIMIIPYIASLSEDAMRAVPMSMREGSYAMGATRFQTAIRVVTPAAISG 224

Query: 192 LVWNMMMSMSGG 203
           +V   ++ +S  
Sbjct: 225 IVAAYILGISRA 236



 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 71/216 (32%), Gaps = 20/216 (9%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYI-----VNHFTYQDVLYVIWLGCITMFRVVVLI 394
           ++ +  +     + G+ +  ++    ++     +    +  +      G + +    + +
Sbjct: 39  LAALSAVLTTAAIVGILLYESYGFFEFVPVSDFLTDTVWTPLFENPRYGILPLVSGTLTV 98

Query: 395 I-IASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             +A +I +P+G              +   I+P  +LLA  P  VF    +  ++     
Sbjct: 99  TGVALLIAVPIGTISAIYLSEFASHRVRETIKPVLELLAGVPTIVFGFFALLFITPLLQK 158

Query: 448 PNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRYIIL 499
               L    +  +   I   +I            A P   +E + +   T ++    ++ 
Sbjct: 159 IMPGLPTFNMLSSGIVIGIMIIPYIASLSEDAMRAVPMSMREGSYAMGATRFQTAIRVVT 218

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P      V   I     A   ++V  +A+    +L 
Sbjct: 219 PAAISGIVAAYILGISRAIGETMVVAIAAGQQPNLT 254


>gi|229815005|ref|ZP_04445343.1| hypothetical protein COLINT_02048 [Collinsella intestinalis DSM
           13280]
 gi|229809492|gb|EEP45256.1| hypothetical protein COLINT_02048 [Collinsella intestinalis DSM
           13280]
          Length = 321

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 6/220 (2%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           L       I+  +   I   +  ++V  +  IL  G+     P  +            + 
Sbjct: 27  LRAQRGDRIATAVLTGIACFVMLIVVSMVAYILYEGLSTLLTPGFLTQPSRSNGAAGGVA 86

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFT 119
                +   ++  ++IS+  +   A      A    +  +    ++ + S+P +    F 
Sbjct: 87  YQLFDSFYLLVITLLISVPVSLGAAVFLTEYAPDGPITAIASTAIETLSSLPSIVVGMFG 146

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F   +  K      A    +F   +  +   + Q+L ++P+   +   +  L+ W+ 
Sbjct: 147 FLVFSVNFGWKYSIISGAVALTMFNIPI--LVRVIQQALEDVPQHQRDACLAMGLTRWEA 204

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
             ++ +P +MP +V  +++S +G  F   A+ +   G + 
Sbjct: 205 TVHVLIPAAMPAIVTGVVLS-AGRVFGEAAALLFTSGMSS 243



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 67/221 (30%), Gaps = 12/221 (5%)

Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370
                  R L +   H             V   +  F   +V  +   I ++ +  ++  
Sbjct: 10  APASGAPRPLAIDEGHILRAQRGDRIATAVLTGIACFVMLIVVSMVAYILYEGLSTLLTP 69

Query: 371 FTYQDVLY---VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA- 426
                              +F    L++I  +I +PV +         +   P   + + 
Sbjct: 70  GFLTQPSRSNGAAGGVAYQLFDSFYLLVITLLISVPVSLGAAVFLTEYAPDGPITAIAST 129

Query: 427 AFPANVFFP-LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS-------AFPND 478
           A       P +VV    +   + N      +I G     +FN+              P  
Sbjct: 130 AIETLSSLPSIVVGMFGFLVFSVNFGWKYSIISGAVALTMFNIPILVRVIQQALEDVPQH 189

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            ++   +  +T W    ++++P   P  VTG + + G  + 
Sbjct: 190 QRDACLAMGLTRWEATVHVLIPAAMPAIVTGVVLSAGRVFG 230


>gi|333028294|ref|ZP_08456358.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332748146|gb|EGJ78587.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 244

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPI 112
           L Q +  T   +  + +I++        L          ++  L  VL  +++I +S+P 
Sbjct: 5   LSQASWDTLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNIARSMP- 63

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG E AAI  +    +      +  ++  +   L E  +S 
Sbjct: 64  FIILMVALMGFTRWLTGTTIGRE-AAIVPLAIGAIPFYARLVETAVREVDHGLVEAVQSM 122

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + W     + VP S+P LV       S     +V           +   G+G      
Sbjct: 123 GGTTWAVVRKVLVPESLPSLV-------SSATTTIVTLIGYSAMAGTVGAGGLGDIAIRE 175

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++    +++  + +L V+    Q L
Sbjct: 176 GFQRFETGLMWVTVAILAVVISVIQFL 202



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V    +IA  + +P+G+ +             ++  +     +  + P  +    +
Sbjct: 12  TLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNIARSMPFIILMVAL 71

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     ++   +     +  L I    +Y    V        +   E   S   T W   
Sbjct: 72  MGFTRWLTGTTIGREAAIVPLAIGAIPFYARL-VETAVREVDHGLVEAVQSMGGTTWAVV 130

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +++P   P  V+ A T        S ++     G       GLG        +     
Sbjct: 131 RKVLVPESLPSLVSSATTTIVTLIGYSAMAGTVGAG-------GLGDIAIREGFQRFETG 183

Query: 555 VVLGVLIMCCFVLALNRFL 573
           ++   + +   V+++ +FL
Sbjct: 184 LMWVTVAILAVVISVIQFL 202


>gi|323359368|ref|YP_004225764.1| nitrate/sulfonate/bicarbonate ABC transporter permease
           [Microbacterium testaceum StLB037]
 gi|323275739|dbj|BAJ75884.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 260

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 75/256 (29%), Gaps = 16/256 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
             +++L +   V       W+  V   +         + V     +    +     IT  
Sbjct: 7   PGWVRLLAPVVVGVAGLAAWYAFVASGSAPRMLPD-PFAVATEFVERFGLIAEAAGITGT 65

Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
             +V ++  S++ I +         +     P    LA  P     P+  +       + 
Sbjct: 66  NALVGLVAGSLLAILLAALAATWRPVDGMTAPLVAALAVVPIVALTPIFNTMFGA---SS 122

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                 +        +  N + G        ++   +   TG + +  + LP   PY VT
Sbjct: 123 QFGRQAVAGIAAFVPVFVNTLRGLRQTRPVQRDFFRATAATGNQTFLRLTLPTALPYLVT 182

Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-------GVLI 561
           G   A   A  +++V+E            G+G  IA   + G                L+
Sbjct: 183 GVRVAASLAVISALVAEYFGG-----PADGIGTAIATYAKSGRASLAWAFVGGGVVIGLV 237

Query: 562 MCCFVLALNRFLWHPL 577
                  L R +   L
Sbjct: 238 FFLVTSLLERLVTRRL 253



 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 80/254 (31%), Gaps = 25/254 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           ++    +      +  G     +P               + + A  T    L  +V   L
Sbjct: 17  VVGVAGLAAWYAFVASGSAPRMLPDPFAVATEFVERFGLIAEAAGITGTNALVGLVAGSL 76

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV---VYFMNLYPGKVIGAELAA 138
              + A LAA  R +  +  P+      +  L  +       ++          G +  A
Sbjct: 77  LAILLAALAATWRPVDGMTAPL------VAALAVVPIVALTPIFNTMFGASSQFGRQAVA 130

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A F     N    + Q+   + RD    + +   +G Q F  L +P ++P LV  + +
Sbjct: 131 GIAAFVPVFVNTLRGLRQT-RPVQRDFFRATAA---TGNQTFLRLTLPTALPYLVTGVRV 186

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY-------AMLTMLGV 251
           + S      + +E         P  GIG+ IA   K                  L    V
Sbjct: 187 AASLAVISALVAEYFGG-----PADGIGTAIATYAKSGRASLAWAFVGGGVVIGLVFFLV 241

Query: 252 IFLYDQLLFRPMIV 265
             L ++L+ R +  
Sbjct: 242 TSLLERLVTRRLGA 255


>gi|318060554|ref|ZP_07979277.1| binding-protein-dependent transporter transmembrane subunit
           [Streptomyces sp. SA3_actG]
 gi|318081046|ref|ZP_07988378.1| binding-protein-dependent transporter transmembrane subunit
           [Streptomyces sp. SA3_actF]
          Length = 249

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPI 112
           L Q +  T   +  + +I++        L          ++  L  VL  ++++ +S+P 
Sbjct: 10  LSQASWDTLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNVARSMP- 68

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG E AAI  +    +      +  ++  +   L E  +S 
Sbjct: 69  FIILMVALMGFTRWLTGTTIGRE-AAIVPLAIGAIPFYARLVETAVREVDHGLVEAVQSM 127

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + W     + VP S+P LV       S     +V           +   G+G      
Sbjct: 128 GGTTWAVVRKVLVPESLPSLV-------SSATTTIVTLIGYSAMAGTVGAGGLGDIAIRE 180

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
             ++    +++  + +L V+    Q L
Sbjct: 181 GFQRFETGLMWVTVAILAVVISVIQFL 207



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V    +IA  + +P+G+ +             ++  +     +  + P  +    +
Sbjct: 17  TLYMVGWSTLIAVALGLPIGVLLVLTARGGLLRNAVLAKVLGQLVNVARSMPFIILMVAL 76

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     ++   +     +  L I    +Y    V        +   E   S   T W   
Sbjct: 77  MGFTRWLTGTTIGREAAIVPLAIGAIPFYARL-VETAVREVDHGLVEAVQSMGGTTWAVV 135

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R +++P   P  V+ A T        S ++     G       GLG        +     
Sbjct: 136 RKVLVPESLPSLVSSATTTIVTLIGYSAMAGTVGAG-------GLGDIAIREGFQRFETG 188

Query: 555 VVLGVLIMCCFVLALNRFL 573
           ++   + +   V+++ +FL
Sbjct: 189 LMWVTVAILAVVISVIQFL 207


>gi|315644671|ref|ZP_07897802.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus vortex V453]
 gi|315279930|gb|EFU43229.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus vortex V453]
          Length = 302

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 76  MVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
           ++ISL+ +      A       A + +L  V+   ++ + S+P + F  F +  F+  + 
Sbjct: 88  LIISLIVSIPIGIAAGIYLAEFAPNNKLIEVVRICVEGLSSVPSIIFGLFGIALFVEFFE 147

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
             +     A   A     V  +T    +S+  +P +L   S +   +  Q    + +P +
Sbjct: 148 IGLTILGAAISLAFLNLPV--LTRVTEESIRAVPVELRNASFALGSTHLQTIRRVLLPVA 205

Query: 189 MPGLVWNMMMSMSGGW 204
           M G++  + ++    +
Sbjct: 206 MNGIMTGICLTAGRAF 221



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 76/215 (35%), Gaps = 22/215 (10%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGC 384
            P         +  S +LD  +  +V G  I +    +G +          + +    G 
Sbjct: 8   HPTLAYSFGKRRGASVLLDRLFTGLVWGTGIIVILFIVGLLFLLLEKGLPQLSWNFLYGL 67

Query: 385 IT-----------MFRVVVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLA 426
            +           +F    ++II+ I+ IP+GI  G           +   ++   + L+
Sbjct: 68  PSEIEEGGGIGPALFNSFYVLIISLIVSIPIGIAAGIYLAEFAPNNKLIEVVRICVEGLS 127

Query: 427 AFPANVFFPLVVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVAS 484
           + P+ +F    ++    ++ +   +  + + +      +L  V      A P + +  + 
Sbjct: 128 SVPSIIFGLFGIALFVEFFEIGLTILGAAISLAFLNLPVLTRVTEESIRAVPVELRNASF 187

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           +   T  +  R ++LP      +TG     G A+ 
Sbjct: 188 ALGSTHLQTIRRVLLPVAMNGIMTGICLTAGRAFG 222


>gi|258545592|ref|ZP_05705826.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258519144|gb|EEV88003.1| taurine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 247

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 19/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           IL  G  +  +P  +  +  I      L ++A  T   +   ++       + A     S
Sbjct: 22  ILATGTPKYILPPPLAVLQKIVSARSQLAEHALVTLAEVGLGLISGTTLGILSALALQYS 81

Query: 94  RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153
           R L  +L P+L   Q+IP+        ++F      K++   L   F I T+        
Sbjct: 82  RLLRALLSPLLVSSQAIPVYALAPVLTLWFGFGMLPKILMTVLIIYFPITTAA------- 134

Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
            Y  L   P+   +++RS           L +P ++P     + ++++      V  E +
Sbjct: 135 -YDGLRRTPQGYLDLARSMNSLPRNTLLRLRLPAALPAFASGLRVAVAIAPIGAVIGEWV 193

Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY----DQLLFRPMIVW 266
                     G+G  +  A        +  A+  ++ +        D+LL R +I W
Sbjct: 194 GGSS------GLGYLMTYANARTQTDLLFAALAVLVLITLTLYSATDRLLHR-LIRW 243



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 83/238 (34%), Gaps = 28/238 (11%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWL-------------GCITMFRVVVLIIIASIIWIPVGI 406
            WQ++        Y     +  L               +T+  V + +I  + + I   +
Sbjct: 17  LWQALILATGTPKYILPPPLAVLQKIVSARSQLAEHALVTLAEVGLGLISGTTLGILSAL 76

Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466
            + +   + + + P      A P     P++     +  L P + +++L+I+   + I  
Sbjct: 77  ALQYSRLLRALLSPLLVSSQAIPVYALAPVLTLWFGFGML-PKILMTVLIIY---FPITT 132

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
               G    P  + ++A S +         + LP   P + +G   A   A   +++ E 
Sbjct: 133 AAYDGLRRTPQGYLDLARSMNSLPRNTLLRLRLPAALPAFASGLRVAVAIAPIGAVIGEW 192

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL----NRFLWHPLYLY 580
                    ++GLG  +  +  +     +   + ++    L L    +R L H L  +
Sbjct: 193 VGG------SSGLGYLMTYANARTQTDLLFAALAVLVLITLTLYSATDRLL-HRLIRW 243


>gi|256783297|ref|ZP_05521728.1| binding-protein dependent transport protein [Streptomyces lividans
           TK24]
 gi|289767170|ref|ZP_06526548.1| binding-protein dependent transporter [Streptomyces lividans TK24]
 gi|289697369|gb|EFD64798.1| binding-protein dependent transporter [Streptomyces lividans TK24]
          Length = 316

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 74/252 (29%), Gaps = 14/252 (5%)

Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC-----------GVAIGIA 360
            ++   R     R         L S   +  ++ + W  V             G+     
Sbjct: 25  RLRTPRRRHSADRPRRSVLLTVLTSLVLLYSLVPLVWLAVSATKTQEGLSRSAGLWFDGD 84

Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH-ISSKIQ 419
           +     I   FTY D ++  WL   T+  V +    A+ + +  G  +          + 
Sbjct: 85  FALWDNITETFTYDDGVFTRWL-LNTLLYVGLGAGGATFLAVLGGYALAKFDFPGRRSVF 143

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
                  A P            S   L    W  ++    + + +    +    A P + 
Sbjct: 144 AVVIGAVAVPGTALAVPTFLMFSKMGLTNTPWAVIIPSLISPFGLYLMWVFATEAIPTEL 203

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTG 538
            E A        R +  + LP + P  VT  +      W N  +   +      +  T G
Sbjct: 204 MEAARIDGAGELRTFFRVALPLLAPGIVTVLLFTMVATWNNYFLPLVMLKDPDWYPLTLG 263

Query: 539 LGAYIAESTEKG 550
           L ++  ++   G
Sbjct: 264 LNSWNQQAATAG 275



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 48/156 (30%), Gaps = 5/156 (3%)

Query: 51  IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQS 109
               T D     ++   T L +      +     +     AK        +  ++    +
Sbjct: 92  TETFTYDDGVFTRWLLNTLLYVGLGAGGATFLAVLGGYALAKFDFPGRRSVFAVVIGAVA 151

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P       T + F  +           A+        + +      +   IP +L E +
Sbjct: 152 VPGTALAVPTFLMFSKMGLTNTP----WAVIIPSLISPFGLYLMWVFATEAIPTELMEAA 207

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
           R       + F+ + +P   PG+V  ++ +M   W 
Sbjct: 208 RIDGAGELRTFFRVALPLLAPGIVTVLLFTMVATWN 243


>gi|284034634|ref|YP_003384565.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
 gi|283813927|gb|ADB35766.1| binding-protein-dependent transport systems inner membrane
           component [Kribbella flavida DSM 17836]
          Length = 216

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           + +         L  MV+ LL +     +A +   L   LV +  ++ S+P +       
Sbjct: 11  IWEQLREHLFLALLPMVLGLLISVPLGYVATRFSWLANPLVALGGVLYSLPSIALFIV-- 68

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              +    G  + +    + A+    V  +  ++   L ++P D+ + + S      ++ 
Sbjct: 69  ---LPALIGTKVLSAANIVIALTIYAVSLLIRNVIDGLRSVPEDVLQAAVSVGYGTLRRV 125

Query: 181 WYLGVPFSMPGLVWNMMM 198
             + +P ++P +   + +
Sbjct: 126 ITIDLPIAVPVIFAGLRV 143



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 1/127 (0%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +F  ++ +++  +I +P+G        +++ +     +L + P+   F ++ + +    L
Sbjct: 19  LFLALLPMVLGLLISVPLGYVATRFSWLANPLVALGGVLYSLPSIALFIVLPALIGTKVL 78

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
           +    +  L I+     I  NVI G  + P D  + A S      R    I LP   P  
Sbjct: 79  SAANIVIALTIYAVSLLIR-NVIDGLRSVPEDVLQAAVSVGYGTLRRVITIDLPIAVPVI 137

Query: 507 VTGAITA 513
             G    
Sbjct: 138 FAGLRVV 144


>gi|256851566|ref|ZP_05556955.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           27-2-CHN]
 gi|260660989|ref|ZP_05861904.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           115-3-CHN]
 gi|282932188|ref|ZP_06337636.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 208-1]
 gi|297206382|ref|ZP_06923777.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256616628|gb|EEU21816.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           27-2-CHN]
 gi|260548711|gb|EEX24686.1| phosphate ABC transporter, permease PstA [Lactobacillus jensenii
           115-3-CHN]
 gi|281303675|gb|EFA95829.1| phosphate ABC transporter, permease protein PstA [Lactobacillus
           jensenii 208-1]
 gi|297149508|gb|EFH29806.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 293

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 83/204 (40%), Gaps = 7/204 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
               ++++ ++ +++ G+ + +           + +   +      +   ++  ++IS+ 
Sbjct: 20  FAGILVILFLLYLIVEGLPQLSWHFLTSASDSFSTN-GGIRDQLFNSFYLVVITLIISIP 78

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
            +   A      AK       L   ++++ S+P +    F  + F+  +  K+  + LA 
Sbjct: 79  LSLGAAIYLSEYAKDNIFTRSLRLAIEVLSSLPSVVIGLFGYLIFVVNF--KMGFSILAG 136

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
             A+    +  +T +  Q+L  IP    +      ++ W+    + +P + P ++   ++
Sbjct: 137 ALALTILNIPLLTTNAEQALRQIPYLQRQAGLGLGMTKWRVTKDIVIPAAFPSILTGAIL 196

Query: 199 SMSGGWFFVVASEMIVVGDTVIPL 222
           + SG  F   A+ +   G + I +
Sbjct: 197 A-SGRIFGEAAALIFTSGQSSIAV 219



 Score = 46.5 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
              IF   +V    + +  + +  +  HF           G I   +F    L++I  II
Sbjct: 16  GGAIFAGILVILFLLYLIVEGLPQLSWHFLTSASDSFSTNGGIRDQLFNSFYLVVITLII 75

Query: 401 WIPV--GIWIGFRPHI-----SSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLW 451
            IP+  G  I    +      +  ++   ++L++ P+ V   F  ++  V++      L 
Sbjct: 76  SIPLSLGAAIYLSEYAKDNIFTRSLRLAIEVLSSLPSVVIGLFGYLIFVVNFKMGFSILA 135

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L +       +  N        P   ++      +T WR  + I++P  FP  +TGAI
Sbjct: 136 GALALTILNIPLLTTNAEQALRQIPYLQRQAGLGLGMTKWRVTKDIVIPAAFPSILTGAI 195

Query: 512 TACGGAWN 519
            A G  + 
Sbjct: 196 LASGRIFG 203


>gi|182418664|ref|ZP_02949941.1| putrescine transport system permease protein PotH [Clostridium
           butyricum 5521]
 gi|237667520|ref|ZP_04527504.1| putrescine transport system permease protein PotH [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377526|gb|EDT75080.1| putrescine transport system permease protein PotH [Clostridium
           butyricum 5521]
 gi|237655868|gb|EEP53424.1| putrescine transport system permease protein PotH [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 280

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 76/211 (36%), Gaps = 13/211 (6%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
             F+++  +I +      +T             L          R+    L + ++ L+ 
Sbjct: 18  ALFIVIPLLIVLFFSFTVQTDSGYSFSLENYSRLISSQYFNIFLRSIWLALISTILCLIV 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQS-----------IPILGFLTFT--VVYFMNLYPG 129
            +  A + ++ +      + +L I+             +PILG       ++  + + P 
Sbjct: 78  GYPVAYIISQMKVSRRNFMIMLFILPMWMNFLLRTYAWMPILGKTGIVNNILSKVGIGPI 137

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
             +  + A +  +  + +  M   +Y  L  + +DL   +     + ++ F  + +P S+
Sbjct: 138 SFLYNDGAVLLGMVYNFLPFMVLPLYTILIKMDQDLINAAADLGANRFKIFLKVILPLSI 197

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220
           PG+   + M         V S ++  G  ++
Sbjct: 198 PGIFSGITMVFMPAVSTFVISRLLGGGQFML 228



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              D    A+      ++ +  +ILP   P   +G       A +  ++S +   G   L
Sbjct: 169 MDQDLINAAADLGANRFKIFLKVILPLSIPGIFSGITMVFMPAVSTFVISRLLGGGQFML 228

Query: 535 RTTGLGAYI-AESTEKGSF 552
               LG  I  + T  G +
Sbjct: 229 ----LGNLIEQQYTTMGDW 243


>gi|160933935|ref|ZP_02081322.1| hypothetical protein CLOLEP_02797 [Clostridium leptum DSM 753]
 gi|156866608|gb|EDO59980.1| hypothetical protein CLOLEP_02797 [Clostridium leptum DSM 753]
          Length = 277

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA-KSRRLGMVLVPILDIMQSIPILG 114
               + P+Y   + +  + AMV+  +F      + A KS          L ++Q      
Sbjct: 62  FTNTNFPRYLLNSFIVAIVAMVLCTVFAATAGYVIARKSTFFFRSYGVTLLLLQ------ 115

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS---MYQSLCNIPRDLEEVSRS 171
                ++        K +G        I T    N+ FS   +      IP DLEE +R 
Sbjct: 116 MFPTILLLLPLFLIFKNLGLVNTIYALIITYTAMNLPFSIWLVRSFFSTIPTDLEEAARI 175

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF-FVVASEMIVVGDTVIPLPGIGSYIA 230
              S ++ F+ + +P ++PGL    + +    W  +++AS  +   D      G+ S+I 
Sbjct: 176 DGCSQFKTFYKIILPLALPGLATVAIFTFVNSWNDYLMASLFLRSDDIYTLTVGLHSFIN 235

Query: 231 L 231
            
Sbjct: 236 Q 236



 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGH 531
           S  P D +E A     + ++ +  IILP   P   T AI     +WN   + S       
Sbjct: 163 STIPTDLEEAARIDGCSQFKTFYKIILPLALPGLATVAIFTFVNSWNDYLMASLFLRSDD 222

Query: 532 IHLRTTGLGAYIAE 545
           I+  T GL ++I +
Sbjct: 223 IYTLTVGLHSFINQ 236


>gi|160894770|ref|ZP_02075545.1| hypothetical protein CLOL250_02321 [Clostridium sp. L2-50]
 gi|156863704|gb|EDO57135.1| hypothetical protein CLOL250_02321 [Clostridium sp. L2-50]
          Length = 287

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 79/202 (39%), Gaps = 8/202 (3%)

Query: 4   YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63
           Y   P  +  RI   +   L  V +  I+  +L        P D+  +   + +   LP 
Sbjct: 10  YKRRPGSLILRILVYLAAALTLVCIAFILIYILAKGIPNLTP-DLFKLEYTSDNCSMLPA 68

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLTFT 119
               T    L +++I+       A    +  + G  LV I+ I    +  IP + +  F 
Sbjct: 69  -LVNTLFMTLLSLLIAGPIGIFAAIYLVEYAKSGNKLVGIVRITAETLTGIPSIVYGLFG 127

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ FM      +  + L+  F +    +  +  +  ++L  +P+   E S        + 
Sbjct: 128 MILFMTKLGWGL--SLLSGAFTLAIMVLPVIMRTTEEALLAVPKSYREGSFGLGAGKLRT 185

Query: 180 FWYLGVPFSMPGLVWNMMMSMS 201
            + + +P ++PG++  ++++  
Sbjct: 186 VFKVVLPSAVPGILSGVILATG 207



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 10/197 (5%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
           +        + + Y+        +  + I I  + I  +       +           + 
Sbjct: 11  KRRPGSLILRILVYLAAALTLVCIAFILIYILAKGIPNLTPDLFKLEYTSDNCSMLPALV 70

Query: 389 RVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPL-VVS 439
             + + +++ +I  P+GI+              +   ++  A+ L   P+ V+    ++ 
Sbjct: 71  NTLFMTLLSLLIAGPIGIFAAIYLVEYAKSGNKLVGIVRITAETLTGIPSIVYGLFGMIL 130

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYII 498
            ++      +L      +      ++         A P  ++E +        R    ++
Sbjct: 131 FMTKLGWGLSLLSGAFTLAIMVLPVIMRTTEEALLAVPKSYREGSFGLGAGKLRTVFKVV 190

Query: 499 LPGIFPYYVTGAITACG 515
           LP   P  ++G I A G
Sbjct: 191 LPSAVPGILSGVILATG 207


>gi|15643989|ref|NP_229038.1| sugar ABC transporter, permease protein, putative [Thermotoga
           maritima MSB8]
 gi|170289366|ref|YP_001739604.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
 gi|4981787|gb|AAD36308.1|AE001779_10 sugar ABC transporter, permease protein, putative [Thermotoga
           maritima MSB8]
 gi|170176869|gb|ACB09921.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga sp. RQ2]
          Length = 265

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 4/193 (2%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVV 121
           +    +    L ++ IS L          +    G  ++ +  +M +SIP++      VV
Sbjct: 63  KATLVSVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVV 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +M             A  ++    V  +T S++  +     + EE    F LS +Q F 
Sbjct: 123 LYMRFNLADTTLGVALAHASMILPFVVLITSSVFSGISV---EYEEAGMVFGLSRFQAFI 179

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++PGL  + + +    W  V AS ++ + +  +P   + + +A     +     
Sbjct: 180 RITLPLALPGLAASAIFAFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGT 239

Query: 242 LYAMLTMLGVIFL 254
           + A+  M+ + F+
Sbjct: 240 IMAVPAMVFIFFI 252



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 9/241 (3%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLI 394
           + L   +F V+  +     + +   I       + LY +++         +++   ++ I
Sbjct: 17  WFLTPVFFIVLASLTPSSDYYNPSRIFPSSLTLEHLYKLFVTLGGGKATLVSVQVALISI 76

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSYYHLNPNLWL 452
            I+ ++ +P G  +         I   + L+  + P  V   PLVV  + +   +  L +
Sbjct: 77  GISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMRFNLADTTLGV 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L        +++    +  S    +++E    F ++ ++ +  I LP   P     AI 
Sbjct: 137 ALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPLALPGLAASAIF 196

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   +WN    S + +  +  L    L   +A           ++ V  M          
Sbjct: 197 AFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGTIMAVPAMVFIFFIRKYL 256

Query: 573 L 573
           +
Sbjct: 257 V 257


>gi|330507561|ref|YP_004383989.1| phosphate ABC transporter permease PstC [Methanosaeta concilii
           GP-6]
 gi|328928369|gb|AEB68171.1| phosphate ABC transporter, permease protein PstC [Methanosaeta
           concilii GP-6]
          Length = 297

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 66/164 (40%), Gaps = 6/164 (3%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFT 119
           + +    + A+ I++   F  A   A+    R   +L P ++++  +P + +    +   
Sbjct: 70  TASLTITILALFINIAIGFPLAIYLAELAGPRSKAILKPAIELLAGVPSIVYGFLGVIIL 129

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V Y  + +      + LA    +    +  +T     +L  +P + +E S +   + WQ 
Sbjct: 130 VSYLQDSFDMLTGRSILAGSILLGVMFIPYLTTICEDALRAVPGEFKEGSLALGANRWQT 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
              + +P +  G+   +++++       +A  ++V     I  P
Sbjct: 190 IRNVTIPAASSGITAAVLLNIGSIIGETMAVLLVVGNVARIASP 233



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 10/176 (5%)

Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFP 429
              D+   + L   ++   ++ + I   I  P+ I++     P   + ++P  +LLA  P
Sbjct: 58  PSGDIYGFLPLITASLTITILALFINIAIGFPLAIYLAELAGPRSKAILKPAIELLAGVP 117

Query: 430 ANVFFPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVI--AGASAFPNDFKE 481
           + V+  L V  +  Y       L     L+  ++ G  +      I      A P +FKE
Sbjct: 118 SIVYGFLGVIILVSYLQDSFDMLTGRSILAGSILLGVMFIPYLTTICEDALRAVPGEFKE 177

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            + +     W+  R + +P          +   G     ++   +       + + 
Sbjct: 178 GSLALGANRWQTIRNVTIPAASSGITAAVLLNIGSIIGETMAVLLVVGNVARIASP 233


>gi|262191477|ref|ZP_06049662.1| methionine ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032625|gb|EEY51178.1| methionine ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 225

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A  +          +   +++        L   L  +++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPNGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 18/192 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVF---F 434
           T++ V +   +   + IP+G+ +             ++  +     +  + P  V     
Sbjct: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             V   +    +     +  L I G   ++   + +     PN   E A S   T  +  
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTI-GAIPFVARLIESALLEVPNGLVEAAQSMGATPLQII 142

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P  +           + S ++     G +          I     +     
Sbjct: 143 RKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITI 196

Query: 555 VVLGVLIMCCFV 566
           + + V+++   V
Sbjct: 197 MAVTVVMLIVLV 208


>gi|237726313|ref|ZP_04556794.1| phosphate ABC transporter [Bacteroides sp. D4]
 gi|229434839|gb|EEO44916.1| phosphate ABC transporter [Bacteroides dorei 5_1_36/D4]
          Length = 295

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 70/210 (33%), Gaps = 14/210 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAF---------VLVIGIINILLHGIQETTVPRDIVDIVPI 54
            ++ P     R   + +              +++  I+  +++          +      
Sbjct: 3   QDVFPARQGARKRRSQWLAFGIFKLLSYSIVLILFAILGFIIYKGIGVISWEFLTTAPSD 62

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP 111
            +    +      T   M+ + + +     +        A   +L   +  + + +  IP
Sbjct: 63  GMTGGGIWPAIVGTFYLMVGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRMMTNNLSGIP 122

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + F  F +  F+         + LA    +    V  +  +  ++L  IP    E S +
Sbjct: 123 SIVFGLFGMALFVKYMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSFREGSLA 180

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +  Q  W++ +P  MP ++  +++++ 
Sbjct: 181 LGATKLQTIWHVILPMGMPNIITGLILALG 210



 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  GI   S  ++    +       IW   +  F ++V    +++   
Sbjct: 32  IVLILFAILGFIIYKGIGVISWEFLTTAPSDGMTGGGIWPAIVGTFYLMVG---SALFAF 88

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA-------FPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G   +  +      + +          P+ VF  F + +        +  L  S
Sbjct: 89  PVGVMSGIYMNEYAPKGKLVRFIRMMTNNLSGIPSIVFGLFGMALFVKYMGFGDSILAGS 148

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+ F+E + +   T  +   ++ILP   P  +TG I A
Sbjct: 149 LTLGLLCVPLVIRTTEEALKAIPDSFREGSLALGATKLQTIWHVILPMGMPNIITGLILA 208

Query: 514 CG 515
            G
Sbjct: 209 LG 210


>gi|288573457|ref|ZP_06391814.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569198|gb|EFC90755.1| phosphate ABC transporter, inner membrane subunit PstC
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 289

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 8/207 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASR-TTLRMLSAMVIS 79
           L+ F+L  GI  +    ++E  +  D      P  L +  L   +   T L  + A+  S
Sbjct: 24  LIYFLLQEGIPTLREVSLKELLLGFDWYPTEEPPALGMAPLIVGSMTVTLLSAVMAVPFS 83

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAEL 136
            L     + +A        +L P L+++  +P  +LGFL   V+  ++      + G  L
Sbjct: 84  FLIAIFLSEVA--PSWFREILKPALELLGFLPSIVLGFLGMVVLAPWLQERFDLLSGLNL 141

Query: 137 AAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
                +  + +  +  S+ + SL  +PR+L +   +   + W+    + +P ++PGL+  
Sbjct: 142 FNASLLMGAMIVPIVASLAEESLQAVPRELRDACYALGATRWETIRKVVLPAALPGLLSA 201

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPL 222
            ++ +  G    +   M   G  ++P+
Sbjct: 202 SLLGIMRGLGETMVVLMAAGGAALVPI 228



 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 79/219 (36%), Gaps = 14/219 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             P   + L ++  +  M+ + +F +  G+           ++    Y            
Sbjct: 4   RIPGWLITLTASVSLFIMVFLIYFLLQEGIPTLREVSLKELLLGFDWYPTEEPPALGMAP 63

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVS 439
            +   + + ++++++ +P    I               ++P  +LL   P+ V   L + 
Sbjct: 64  LIVGSMTVTLLSAVMAVPFSFLIAIFLSEVAPSWFREILKPALELLGFLPSIVLGFLGMV 123

Query: 440 CVSYYH-------LNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGW 491
            ++ +           NL+ + L++      I+ ++      A P + ++   +   T W
Sbjct: 124 VLAPWLQERFDLLSGLNLFNASLLMGAMIVPIVASLAEESLQAVPRELRDACYALGATRW 183

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
              R ++LP   P  ++ ++         ++V  +A+ G
Sbjct: 184 ETIRKVVLPAALPGLLSASLLGIMRGLGETMVVLMAAGG 222


>gi|218130138|ref|ZP_03458942.1| hypothetical protein BACEGG_01725 [Bacteroides eggerthii DSM 20697]
 gi|317476631|ref|ZP_07935876.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|217987642|gb|EEC53970.1| hypothetical protein BACEGG_01725 [Bacteroides eggerthii DSM 20697]
 gi|316907227|gb|EFV28936.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 286

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 65/183 (35%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L    ++  I+  +++          +       +    +      T   M  + + +  
Sbjct: 21  LSVVGILFAILGFIIYKGVGVIDWEFLTSAPTDGMTSGGILPAIVGTFCLMAGSALFAFP 80

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
              +        A    +   +  + + +  IP + F  F +  F+N        + LA 
Sbjct: 81  VGVMSGIYMNEYAPKGWVVRFIRIMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SILAG 138

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L  IP  L E SR+   +  Q  W++ +P  MP ++  +++
Sbjct: 139 SLTLGLLSLPLVIRTTEEALKAIPDSLREGSRALGATKLQTIWHVILPMGMPNIITGLIL 198

Query: 199 SMS 201
           ++ 
Sbjct: 199 ALG 201



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA--SI 399
            +L +    ++  +   I ++ +G I   F        +  G I    V    ++A  ++
Sbjct: 17  RLLSLSVVGILFAILGFIIYKGVGVIDWEFLTSAPTDGMTSGGILPAIVGTFCLMAGSAL 76

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G           +   I+     L+  P+ VF    ++    Y    +  L
Sbjct: 77  FAFPVGVMSGIYMNEYAPKGWVVRFIRIMTNNLSGIPSIVFGLFGMALFVNYMDFGDSIL 136

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +   +   ++        A P+  +E + +   T  +   ++ILP   P  +TG 
Sbjct: 137 AGSLTLGLLSLPLVIRTTEEALKAIPDSLREGSRALGATKLQTIWHVILPMGMPNIITGL 196

Query: 511 ITACG 515
           I A G
Sbjct: 197 ILALG 201


>gi|229815004|ref|ZP_04445342.1| hypothetical protein COLINT_02047 [Collinsella intestinalis DSM
           13280]
 gi|229809491|gb|EEP45255.1| hypothetical protein COLINT_02047 [Collinsella intestinalis DSM
           13280]
          Length = 303

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 62/160 (38%), Gaps = 10/160 (6%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            +  ++S       A  +A      +      +  P+++++  IP + F        V  
Sbjct: 84  FAVTLLSTAIALPIAIGSAIFAVEIRPDFGKKIFQPLVELLVGIPSVVFGLIGFHVVVAA 143

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
              ++  +     L     +    +  +T     +L  +P    + S +   + WQ   +
Sbjct: 144 CKAIFGTQTGMGILPGAVVLAIMILPTVTTLSMDALRAVPDGYRQGSLALGYTRWQTIRH 203

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           + +  +MP L+  +++ M+  +   +A  M++ G  V+PL
Sbjct: 204 VVIKSAMPSLMTAVILGMTRAFGETLAVRMVIGGAEVMPL 243



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 14/163 (8%)

Query: 391 VVLIIIASIIWIPVGI-----WIGFRP-HISSKIQPFAQLLAAFPANVF----FPLVVSC 440
             + ++++ I +P+ I      +  RP       QP  +LL   P+ VF    F +VV+ 
Sbjct: 84  FAVTLLSTAIALPIAIGSAIFAVEIRPDFGKKIFQPLVELLVGIPSVVFGLIGFHVVVAA 143

Query: 441 ---VSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRY 496
              +        +    +++       +  + +    A P+ +++ + +   T W+  R+
Sbjct: 144 CKAIFGTQTGMGILPGAVVLAIMILPTVTTLSMDALRAVPDGYRQGSLALGYTRWQTIRH 203

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
           +++    P  +T  I     A+  ++   +   G   +  + L
Sbjct: 204 VVIKSAMPSLMTAVILGMTRAFGETLAVRMVIGGAEVMPLSLL 246


>gi|148254708|ref|YP_001239293.1| D- and L-methionine ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146406881|gb|ABQ35387.1| D- and L-methionine ABC transporter, permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 221

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP--------ILDIMQSIPI 112
           + Q    +   + +A +++           A SR+  +   P        +++  +S P 
Sbjct: 9   IIQATGESLFMVSTAALVATSLGLPLGIFLATSRKGELFAAPSVNAILGVVVNATRSTP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG+  AAI  +  +    +   +  ++  +   L E + SF
Sbjct: 68  FIILVVAIIPFTRLVAGTSIGSG-AAIVPLTVAATPFIARLVEAAIREVDGGLIETASSF 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  + + +P ++PGLV  + +++
Sbjct: 127 GATPLQIVFKVLIPEALPGLVLALTLAV 154



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV-----F 433
           +I     ++F V    ++A+ + +P+GI++           P    +     N      F
Sbjct: 9   IIQATGESLFMVSTAALVATSLGLPLGIFLATSRKGELFAAPSVNAILGVVVNATRSTPF 68

Query: 434 FPLVVSCVSYYHL------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
             LVV+ + +  L           +  L +  T + I   V A          E ASSF 
Sbjct: 69  IILVVAIIPFTRLVAGTSIGSGAAIVPLTVAATPF-IARLVEAAIREVDGGLIETASSFG 127

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITAC 514
            T  +    +++P   P  V     A 
Sbjct: 128 ATPLQIVFKVLIPEALPGLVLALTLAV 154


>gi|148270660|ref|YP_001245120.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
 gi|147736204|gb|ABQ47544.1| binding-protein-dependent transport systems inner membrane
           component [Thermotoga petrophila RKU-1]
          Length = 265

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 4/193 (2%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVV 121
           +    +    L ++ IS L          +    G  ++ +  +M +SIP++      VV
Sbjct: 63  KATLVSVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVV 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            +M             A  ++    V  +T S++  +     + EE    F LS +Q F 
Sbjct: 123 LYMRFNLADTTLGVALAHASMILPFVVLITSSVFSGISV---EYEEAGMVFGLSRFQAFI 179

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P ++PGL  + + +    W  V AS ++ + +  +P   + + +A     +     
Sbjct: 180 RITLPLALPGLAASAIFAFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGT 239

Query: 242 LYAMLTMLGVIFL 254
           + A+  M+ + F+
Sbjct: 240 IMAVPAMIFIFFI 252



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 9/241 (3%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLI 394
           + L   +F V+  +     + +   I       + LY +++         +++   ++ I
Sbjct: 17  WFLTPVFFIVLASLTPSSDYYNPSRIFPSSLTLEHLYKLFVTLGGGKATLVSVQVALISI 76

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSYYHLNPNLWL 452
            I+ ++ +P G  +         I   + L+  + P  V   PLVV  + +   +  L +
Sbjct: 77  GISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMRFNLADTTLGV 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L        +++    +  S    +++E    F ++ ++ +  I LP   P     AI 
Sbjct: 137 ALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPLALPGLAASAIF 196

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   +WN    S + +  +  L    L   +A           ++ V  M          
Sbjct: 197 AFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGTIMAVPAMIFIFFIRKYL 256

Query: 573 L 573
           +
Sbjct: 257 V 257


>gi|283783987|ref|YP_003363852.1| D-methionine ABC transporter permease [Citrobacter rodentium
           ICC168]
 gi|282947441|emb|CBG86988.1| D-methionine ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 217

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ +L  +L  +++I +SI
Sbjct: 7   WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSAVVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRVIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPVGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPLQIVRKVLLPEALPGLVNAATITL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSAVVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRVIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPVGLIEASRAMGATPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R ++LP   P  V  A          S +      G +       G     +T
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|126700881|ref|YP_001089778.1| phosphate ABC transporter permease [Clostridium difficile 630]
 gi|255102410|ref|ZP_05331387.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-63q42]
 gi|255308310|ref|ZP_05352481.1| phosphate ABC transporter permease [Clostridium difficile ATCC
           43255]
 gi|115252318|emb|CAJ70159.1| ABC-type transport system, phosphate-specific permease [Clostridium
           difficile]
          Length = 274

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 9/137 (6%)

Query: 72  MLSAMVISLLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
            L  +V+S++       LAA       K  +    +    + +  IP + +  F  ++F+
Sbjct: 63  TLYTVVVSIVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFFV 122

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                       +   AI    V  +  +  ++L  +P+   E S +   + +Q  + + 
Sbjct: 123 VTLKMGYSIVAGSLTVAIIILPV--IIRTTEEALKTVPQAYRESSLALGATKFQTLYKVV 180

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PG++  +++S+ 
Sbjct: 181 LPSAIPGILSGVILSVG 197



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 14/261 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
             F EN L+        + +      V      GI   +  ++ ++++      ++ +  
Sbjct: 2   RKFKENLLKSLVYLSALFTIVSLVVIVGFIFIKGIGNMNFNFLFSNYSASGDGGILPMII 61

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF--FPLVVS 439
            T++ VVV I++A+ I I   I++         +       + L+  P+ V+  F  +  
Sbjct: 62  TTLYTVVVSIVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFF 121

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V+       +  SL +       I+          P  ++E + +   T ++    ++L
Sbjct: 122 VVTLKMGYSIVAGSLTVAIIILPVIIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVL 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGS 551
           P   P  ++G I + G     S  + + + G +     G+       T        E G 
Sbjct: 182 PSAIPGILSGVILSVGRIIGES-AAILLTAGTVAKMPGGIFDSARTLTVHSYLLTKESGD 240

Query: 552 FPEVVLGVLIMCCFVLALNRF 572
                   +++   VLALN  
Sbjct: 241 IATAASIGIVLIVIVLALNML 261


>gi|284046468|ref|YP_003396808.1| binding-protein-dependent transporters inner membrane component
           [Conexibacter woesei DSM 14684]
 gi|283950689|gb|ADB53433.1| binding-protein-dependent transport systems inner membrane
           component [Conexibacter woesei DSM 14684]
          Length = 318

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 25/232 (10%)

Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368
           +S             R       L       ++++L + +  V   + + +  Q + Y+ 
Sbjct: 1   MSGVTAPPPAARRSARESSASWRLTDRLGLALAWVLGVLFLVVTAAIVLYMMVQGLRYVR 60

Query: 369 NH---------FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISS 416
                      F+  +    +     T+    + + IA  + + VG+W+   G    ++ 
Sbjct: 61  PELFVTSPAAGFSESETGGFLDPLLGTVIVAAMAMAIAFPVGLGVGVWLSEYGRPSALAR 120

Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN-------------LWLSLLMIFGTQWY 463
             +   ++LA  P+ VF            L                   + ++ F     
Sbjct: 121 VTESTVEMLAGTPSIVFALFGTLLFEQGALALFSRTNDGVVYGRSFFAAAAMLSFVALPL 180

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           ++ NV  G  A P   +E + +   T     R ++LP   P  VTGA+   G
Sbjct: 181 VVANVREGLQAIPGHVREASYAVGKTKLTTTRRVLLPAARPSVVTGAMLGVG 232



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTF--------TVVYFMNLYPGK 130
                        +   L  V    ++++   P + F  F         +  F     G 
Sbjct: 101 VGLGVGVWLSEYGRPSALARVTESTVEMLAGTPSIVFALFGTLLFEQGALALFSRTNDGV 160

Query: 131 VIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           V G    A  A+ +     +   ++ + L  IP  + E S +   +       + +P + 
Sbjct: 161 VYGRSFFAAAAMLSFVALPLVVANVREGLQAIPGHVREASYAVGKTKLTTTRRVLLPAAR 220

Query: 190 PGLVWNMMMSMS 201
           P +V   M+ + 
Sbjct: 221 PSVVTGAMLGVG 232


>gi|302560510|ref|ZP_07312852.1| ABC-type sugar transport system, permease component [Streptomyces
           griseoflavus Tu4000]
 gi|302478128|gb|EFL41221.1| ABC-type sugar transport system, permease component [Streptomyces
           griseoflavus Tu4000]
          Length = 337

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 13/156 (8%)

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           F+ + P    G +  + FA+ T  +W  T         ++  IP+DL E +     S W+
Sbjct: 180 FVGIDPVDWQGEKWPSQFAVSTIIIWRWTGYNALIYLAAMQAIPQDLYESAALDGASRWR 239

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG-------WFFVVASEMIVVGDTVIPLPGIGSYIAL 231
           +F ++ +P   P +++ +++S  G          F          +      G+  Y   
Sbjct: 240 QFLHVTLPSLRPTILFTVVVSTIGASQVFGEPLLFDANKGASGGAEHQFQTLGLYLYEQG 299

Query: 232 AIKE--QDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265
            + +      AI + M  +L V+ + +QL+ R +  
Sbjct: 300 WVNQHLGRASAIAWTMFAILIVVGIINQLISRRLRA 335



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 93/316 (29%), Gaps = 24/316 (7%)

Query: 273 ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL 332
           E+      +  W     R + +     +        L   +     +L  +    P +  
Sbjct: 31  EKRRRAKLSRRWQRD-MRWSPYAFVAPFFLLFLAFGLFPLIYTGWASLHQVELTAPTDMN 89

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            +          D F++             ++  ++       +L    L   T +RV +
Sbjct: 90  WVGLKNYTRIFDDEFFWNAAKNTLTIGIISTVPQLLMAMGIAHIL-NYKLRASTFYRVAM 148

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           L   A+ I     +++         I      +       +                  +
Sbjct: 149 LAPYATSIAAASLVFVLLFGRDYGMINWALDFVG-IDPVDW--------QGEKWPSQFAV 199

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           S ++I+    Y     +A   A P D  E A+    + WR + ++ LP + P  +   + 
Sbjct: 200 STIIIWRWTGYNALIYLAAMQAIPQDLYESAALDGASRWRQFLHVTLPSLRPTILFTVVV 259

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTG-------LGAYI----AESTEKGSFPEVVLGVLI 561
           +  GA  + +  E   +      + G       LG Y+      +   G    +   +  
Sbjct: 260 STIGA--SQVFGEPLLFDANKGASGGAEHQFQTLGLYLYEQGWVNQHLGRASAIAWTMFA 317

Query: 562 MCCFVLALNRFLWHPL 577
           +   V  +N+ +   L
Sbjct: 318 ILIVVGIINQLISRRL 333


>gi|224024788|ref|ZP_03643154.1| hypothetical protein BACCOPRO_01516 [Bacteroides coprophilus DSM
           18228]
 gi|224018015|gb|EEF76022.1| hypothetical protein BACCOPRO_01516 [Bacteroides coprophilus DSM
           18228]
          Length = 294

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 8/182 (4%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
                ++G I +   G+        +       +    +      T   M  + + +   
Sbjct: 33  ALLFFILGFIIVKGIGVINWEF---LSQAPSDGMTKGGIWPAIFGTCCLMAGSALFAFPT 89

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
             +        AK  +L   +  + + +  IP + F  F + +F+N        + LA  
Sbjct: 90  GVMSGIYMNEYAKDGKLVRFIRMMTNNLSGIPSIVFGLFGMAFFVNWLDFGD--SILAGS 147

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +  +  ++  ++P    E S +   +  Q  W + +P +MP ++  +++S
Sbjct: 148 LTLGLLALPIVIRTTEEAFKDLPDSFREGSLALGATKAQTIWNVLLPMAMPRIITGLILS 207

Query: 200 MS 201
           + 
Sbjct: 208 LG 209



 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  + +F +   +  GI   +  ++    +       IW     +F    L+  +++   
Sbjct: 31  VAALLFFILGFIIVKGIGVINWEFLSQAPSDGMTKGGIWPA---IFGTCCLMAGSALFAF 87

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAA-------FPANVFFPLVVSCVS-YYHLNPNLWLSL 454
           P G+  G   +  +K     + +          P+ VF    ++    +     ++    
Sbjct: 88  PTGVMSGIYMNEYAKDGKLVRFIRMMTNNLSGIPSIVFGLFGMAFFVNWLDFGDSILAGS 147

Query: 455 LMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +      I+           P+ F+E + +   T  +    ++LP   P  +TG I +
Sbjct: 148 LTLGLLALPIVIRTTEEAFKDLPDSFREGSLALGATKAQTIWNVLLPMAMPRIITGLILS 207

Query: 514 CG 515
            G
Sbjct: 208 LG 209


>gi|163841810|ref|YP_001626215.1| maltose transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955286|gb|ABY24801.1| maltose transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 289

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 5/199 (2%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
              + L  +   VI+LL     A   A+ + R   +++ ++      P +  +T     F
Sbjct: 83  LFNSVLIGVVVTVIALLVGVFAAYALARLNFRFKFIVLGLILGASMFPGVALITP---LF 139

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                   IG   A I    +  +    +++      +P +LEE +R    +  Q F  +
Sbjct: 140 QLFTDWGWIGQYQALIIPNISFVLPLTVYTLVSFFREMPWELEEAARMDGCTQGQAFRKV 199

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + P +    +++    W   + +  +    T      I S+ A A   Q+    + 
Sbjct: 200 IMPLAAPAVFTTAILAFIASWNEFLIASQLSNDATKTVTVAIASF-AGAQPHQEPYTAVM 258

Query: 244 AMLTMLGVIFLYDQLLFRP 262
           A  T++ V  +   L+F+ 
Sbjct: 259 AAGTIVTVPLVIMVLVFQR 277



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 6/215 (2%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP-F 421
           +    +  F+     +       ++   VV+ +IA ++ +     +         I    
Sbjct: 63  TWDNFITAFSEDRGNHFGLALFNSVLIGVVVTVIALLVGVFAAYALARLNFRFKFIVLGL 122

Query: 422 AQLLAAFPANVFF-PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
               + FP      PL      +  +     L +  I       ++ +++     P + +
Sbjct: 123 ILGASMFPGVALITPLFQLFTDWGWIGQYQALIIPNISFVLPLTVYTLVSFFREMPWELE 182

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
           E A     T  + +R +I+P   P   T AI A   +WN  +++   S       T  + 
Sbjct: 183 EAARMDGCTQGQAFRKVIMPLAAPAVFTTAILAFIASWNEFLIASQLSNDATKTVTVAIA 242

Query: 541 AYI-AESTEKGSFPEVVLGVLI---MCCFVLALNR 571
           ++  A+  ++     +  G ++   +   VL   R
Sbjct: 243 SFAGAQPHQEPYTAVMAAGTIVTVPLVIMVLVFQR 277


>gi|218185790|gb|EEC68217.1| hypothetical protein OsI_36206 [Oryza sativa Indica Group]
          Length = 845

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 34/65 (52%)

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           + AI A+F   +  +  + + +L N+P  L E  R   ++ WQ+  ++ +P ++P +   
Sbjct: 15  VPAITAVFLYSLLPIVRNTHTALDNLPGGLREAGRGIGMTFWQRLRWVEIPVALPVIFGG 74

Query: 196 MMMSM 200
           +  ++
Sbjct: 75  IRTAV 79



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 10/139 (7%)

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL           P +    L    +   I+ N        P   +E      +T W+
Sbjct: 1   MIPLFSLIGHGIGYVPAITAVFLY---SLLPIVRNTHTALDNLPGGLREAGRGIGMTFWQ 57

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             R++ +P   P    G  TA         ++ V   G + L                  
Sbjct: 58  RLRWVEIPVALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLL-------NGISSSDI 110

Query: 553 PEVVLGVLIMCCFVLALNR 571
            +++ G +++    + + +
Sbjct: 111 RQLITGAVMISLLAIFMQK 129


>gi|210620980|ref|ZP_03292365.1| hypothetical protein CLOHIR_00308 [Clostridium hiranonis DSM 13275]
 gi|210154964|gb|EEA85970.1| hypothetical protein CLOHIR_00308 [Clostridium hiranonis DSM 13275]
          Length = 217

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 6/149 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIP 111
           L + +L +    T +  + A +I  +   +         + ++ +  ++  I++I++S P
Sbjct: 10  LFLGALGETIYMTLVPTVLATIIGFVMAVILVLTKPNGLSPNKTVNSIVGFIVNILRSFP 69

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               L   ++    +  G  IG E AAI  I       +   +  +L  +   L E +RS
Sbjct: 70  -FIILMIAMIPLTRIIVGTSIG-ETAAIVPITVGSAPFIARVIESALNEVDEGLIEAARS 127

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           F  +  Q  W + V  +MP ++  + +S+
Sbjct: 128 FGATKSQIIWKVMVKEAMPSIISGITLSI 156



 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 70/203 (34%), Gaps = 13/203 (6%)

Query: 371 FTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQP 420
            +  D L  ++LG +  T++  +V  ++A+II   + + +             ++S +  
Sbjct: 1   MSISDFLSKLFLGALGETIYMTLVPTVLATIIGFVMAVILVLTKPNGLSPNKTVNSIVGF 60

Query: 421 FAQLLAAFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
              +L +FP  +    ++    +            + +  G+  +I   + +  +     
Sbjct: 61  IVNILRSFPFIILMIAMIPLTRIIVGTSIGETAAIVPITVGSAPFIARVIESALNEVDEG 120

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E A SF  T  +    +++    P  ++G   +       + ++     G        
Sbjct: 121 LIEAARSFGATKSQIIWKVMVKEAMPSIISGITLSIISILGCTAMAGAVGAGGFGKVAIV 180

Query: 539 LGAYIAESTEKGSFPEVVLGVLI 561
            G    +      +  V L +L+
Sbjct: 181 YGYQSFDD-NVMLYTVVALAILV 202


>gi|229525521|ref|ZP_04414926.1| methionine ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229339102|gb|EEO04119.1| methionine ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 225

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A  +          +   +++        L   L  +++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 66/210 (31%), Gaps = 19/210 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVF---F 434
           T++ V +   +   + IP+G+ +             ++  +     +  + P  V     
Sbjct: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
             V   +    +     +  L I G   ++   + +     P    E A S   T  +  
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTI-GAIPFVARLIESALLEVPTGLVEAAQSMGATPLQII 142

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R ++LP   P  +           + S ++     G +       G +  + T       
Sbjct: 143 RKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDIT------- 195

Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
           ++   ++M   ++ + + +   L  +    
Sbjct: 196 IMAVTVVMLIVLVQIIQSIGDALVRHVDHR 225


>gi|169628318|ref|YP_001701967.1| ABC transporter permease [Mycobacterium abscessus ATCC 19977]
 gi|169240285|emb|CAM61313.1| Putative ABC transporter, permease protein [Mycobacterium
           abscessus]
          Length = 215

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              + +L    M  V+  +++A++  + +G+ I   P   +     A +    P+     
Sbjct: 11  WAVLSFLAYQHMSLVLQTLVVAAMCAVFLGVLIYRSPWGVASGNALAAIGLTIPSYA--- 67

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+   V    +  +  + +L+ FG+   IL NV+ G +       E A    ++      
Sbjct: 68  LLGVLVGVVGIGVSPSVIMLVFFGSL-PILRNVLVGLTGVDQTLVESARGMGMSRLATLV 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY----IAESTEKGS 551
            + LP  +P  +TG   +       + ++  A          GLG Y    I+      +
Sbjct: 127 RLELPLAWPVIMTGIRVSAQMLMGTAAIAAFALG-------PGLGGYIFSGISRMGGANA 179

Query: 552 FPEVVLGVLIMCCFVLALNRFL 573
              V+ G + +    + L+  L
Sbjct: 180 TNSVIAGTVGILILAVILDSVL 201



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   A +    +L  +V++ +       L  +S          +    ++  +G   
Sbjct: 11  WAVLSFLAYQHMSLVLQTLVVAAMCAVFLGVLIYRSPWG-------VASGNALAAIGLTI 63

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            +      L     IG   + I  +F   +  +  ++   L  + + L E +R   +S  
Sbjct: 64  PSYALLGVLVGVVGIGVSPSVIMLVFFGSL-PILRNVLVGLTGVDQTLVESARGMGMSRL 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                L +P + P ++  + +S +       A     +G      PG+G YI   I    
Sbjct: 123 ATLVRLELPLAWPVIMTGIRVS-AQMLMGTAAIAAFALG------PGLGGYIFSGISRMG 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
                 +++     I +   +L
Sbjct: 176 GANATNSVIAGTVGILILAVIL 197


>gi|149276063|ref|ZP_01882208.1| DL-methionine transporter permease subunit [Pedobacter sp. BAL39]
 gi|149233491|gb|EDM38865.1| DL-methionine transporter permease subunit [Pedobacter sp. BAL39]
          Length = 218

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 15/212 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL--------GMVLVPILDIMQSIPI 112
           L +    T L    +     +       L   +R+           +L   + I +SIP 
Sbjct: 9   LFKGTGETILMTFLSGFFGFVLGLPAGVLLFMTRKGQVLEHRTSNYILSAFVSIFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG E AA+  +       +   +  SL  +P  L E +R+ 
Sbjct: 68  FIILIVWMIPFTRMLVGTSIGVE-AALVPLSIGAAPFIARMVENSLAEVPAGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-YIAL 231
             + +Q    + +P ++P L+    +++      +V    +        L  IG  Y  +
Sbjct: 127 GATPFQVVRKVLLPEALPSLINTAAITL----ITLVGYSAMGGAVGAGGLGQIGYQYGYV 182

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
                 +  +L  ++ ++  I      + R +
Sbjct: 183 GYDTVVMNTVLVILVALVFAIQFIGDFISRRV 214



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 13/200 (6%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAA 427
           +L +      T+    +      ++ +P G+ +              +  +  F  +  +
Sbjct: 6   ILLLFKGTGETILMTFLSGFFGFVLGLPAGVLLFMTRKGQVLEHRTSNYILSAFVSIFRS 65

Query: 428 FPAN---VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
            P     V+       +    +     L  L I G   +I   V    +  P    E A 
Sbjct: 66  IPFIILIVWMIPFTRMLVGTSIGVEAALVPLSI-GAAPFIARMVENSLAEVPAGLIEAAR 124

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   T ++  R ++LP   P  +  A          S +      G +       G Y+ 
Sbjct: 125 AMGATPFQVVRKVLLPEALPSLINTAAITLITLVGYSAMGGAVGAGGLGQIGYQYG-YVG 183

Query: 545 ESTEKGSFPEVVLGVLIMCC 564
             T   +   V+L  L+   
Sbjct: 184 YDTVVMNTVLVILVALVFAI 203


>gi|309777790|ref|ZP_07672738.1| putative ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308914474|gb|EFP60266.1| putative ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 241

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 83/215 (38%), Gaps = 14/215 (6%)

Query: 45  PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104
           P D+  ++   L   +  Q    T +R    +  + +     A L+ +      +  P+L
Sbjct: 33  PLDVFRLMIAQLQSITFYQSTLVTLIRSWGGLAAAFILAAGCAYLSYRVHIFHDLFYPVL 92

Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164
            + +S+P + ++   +++F         G+E +A    F      +  S++  L ++  +
Sbjct: 93  LLTRSVPNISYIIVILLWF---------GSESSAAIVSFLIIFPTIYSSLFSGLQHMDEN 143

Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L++V + +          + +P     +  ++   +S  +   V SE++          G
Sbjct: 144 LKKVIQLYPEGRLYLLRRVYIPLLSSSIQASLANGISLTFKVGVMSEIMG-----QVQMG 198

Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           IG  + +     D+  +      ++ ++   D +L
Sbjct: 199 IGRQMNICRLTSDMTGVFAWTGWIILILLFMDAVL 233



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 10/190 (5%)

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
            +T+ R    +  A I+                   P   L  + P   +  +++     
Sbjct: 54  LVTLIRSWGGLAAAFILAAGCAYLSYRVHIFHDLFYPVLLLTRSVPNISYIIVILLWFG- 112

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              +    +S L+IF T +  LF+   G      + K+V   +        R + +P + 
Sbjct: 113 -SESSAAIVSFLIIFPTIYSSLFS---GLQHMDENLKKVIQLYPEGRLYLLRRVYIPLLS 168

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
                         +   ++SE+           G+G  +           V      + 
Sbjct: 169 SSIQASLANGISLTFKVGVMSEIMG-----QVQMGIGRQMNICRLTSDMTGVFAWTGWII 223

Query: 564 CFVLALNRFL 573
             +L ++  L
Sbjct: 224 LILLFMDAVL 233


>gi|261822737|ref|YP_003260843.1| DL-methionine transporter permease subunit [Pectobacterium wasabiae
           WPP163]
 gi|261606750|gb|ACX89236.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium wasabiae WPP163]
          Length = 217

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T      +     +       L           + +L   L  +++I +SIP    L  
Sbjct: 15  ETVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTLSALVNIFRSIP-FIILLV 73

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  Q
Sbjct: 74  WMIPFTRIIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPTGLIEAARAMGATPMQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGL+    +++
Sbjct: 133 IIRKILLPEALPGLINAATITL 154



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 49/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      ++ +PVG+         I   P +   +     +  + P     V+ 
Sbjct: 16  TVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTLSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E A +   T  +  
Sbjct: 76  IPFTRIIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPTGLIEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R I+LP   P  +  A          S +      G +       G     +T
Sbjct: 135 RKILLPEALPGLINAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|225378728|ref|ZP_03755949.1| hypothetical protein ROSEINA2194_04398 [Roseburia inulinivorans DSM
           16841]
 gi|225209565|gb|EEG91919.1| hypothetical protein ROSEINA2194_04398 [Roseburia inulinivorans DSM
           16841]
          Length = 293

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    VI +  ++             +     +L  +S         +  ++ ++++LL
Sbjct: 32  LVGASAVITVTVLVYLVGYILIHGVPYLRPSLFSLTYNSDNVSMMPAIINTITMVLLALL 91

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           F+  +   AA        K  +L  ++    + +  IP + +  F +++F+         
Sbjct: 92  FSVPFGIGAAIYLVEYAKKGNKLVELVRITAETLTGIPSIIYGLFGMLFFVTALHWGYSM 151

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
              AA  AI    V  +  +  ++L  +P    E S        +  + + +P ++PG++
Sbjct: 152 LAGAATLAIMVLPV--IMRTTEEALLCVPDMYREGSFGLGAGKLRTIFKIVLPTAIPGIL 209

Query: 194 WNMMMSMS 201
             +++++ 
Sbjct: 210 SGIILAIG 217



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 70/199 (35%), Gaps = 12/199 (6%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385
             P +F+ L      + +       +V  + I         + +     D + ++     
Sbjct: 22  KHPGSFILLLLVGASAVITVTVLVYLVGYILIHGVPYLRPSLFSLTYNSDNVSMMPAIIN 81

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH----ISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           T+  V++ ++ +    I   I++         +   ++  A+ L   P+ ++    +  +
Sbjct: 82  TITMVLLALLFSVPFGIGAAIYLVEYAKKGNKLVELVRITAETLTGIPSIIY---GLFGM 138

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWRWWRY 496
            ++    +   S+L    T   ++  VI           P+ ++E +        R    
Sbjct: 139 LFFVTALHWGYSMLAGAATLAIMVLPVIMRTTEEALLCVPDMYREGSFGLGAGKLRTIFK 198

Query: 497 IILPGIFPYYVTGAITACG 515
           I+LP   P  ++G I A G
Sbjct: 199 IVLPTAIPGILSGIILAIG 217


>gi|254976858|ref|ZP_05273330.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-66c26]
 gi|255094244|ref|ZP_05323722.1| phosphate ABC transporter permease [Clostridium difficile CIP
           107932]
 gi|255315998|ref|ZP_05357581.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-76w55]
 gi|255518655|ref|ZP_05386331.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-97b34]
 gi|255651777|ref|ZP_05398679.1| phosphate ABC transporter permease [Clostridium difficile
           QCD-37x79]
 gi|260684803|ref|YP_003216088.1| putative phosphateABC transporter permease [Clostridium difficile
           CD196]
 gi|260688461|ref|YP_003219595.1| putative phosphateABC transporter permease [Clostridium difficile
           R20291]
 gi|306521567|ref|ZP_07407914.1| phosphate ABC transporter, permease protein PstA [Clostridium
           difficile QCD-32g58]
 gi|260210966|emb|CBA66235.1| putative phosphateABC transporter, permease protein [Clostridium
           difficile CD196]
 gi|260214478|emb|CBE06954.1| putative phosphateABC transporter, permease protein [Clostridium
           difficile R20291]
          Length = 274

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 76/189 (40%), Gaps = 9/189 (4%)

Query: 16  FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75
              +F +++ V+++G I I   G         +      + D   LP     T   ++ +
Sbjct: 15  LSALFTIVSLVIIVGFIFIKGIGNMNFNF---LFSNYSASGDGGILP-MIITTLYTVVVS 70

Query: 76  MVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           +V++     + A      AK  +    +    + +  IP + +  F  ++F+        
Sbjct: 71  IVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFFVVTLKMGYS 130

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
               +   AI    V  +  +  ++L  +P+   E S +   + +Q  + + +P ++PG+
Sbjct: 131 IVAGSLTVAIIILPV--IIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVLPSAIPGI 188

Query: 193 VWNMMMSMS 201
           +  +++S+ 
Sbjct: 189 LSGVILSVG 197



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 14/261 (5%)

Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384
             F EN L+        + +      V      GI   +  ++ ++++      ++ +  
Sbjct: 2   RKFKENLLKSLVYLSALFTIVSLVIIVGFIFIKGIGNMNFNFLFSNYSASGDGGILPMII 61

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVF--FPLVVS 439
            T++ VVV I++A+ I I   I++         +       + L+  P+ V+  F  +  
Sbjct: 62  TTLYTVVVSIVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFF 121

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
            V+       +  SL +       I+          P  ++E + +   T ++    ++L
Sbjct: 122 VVTLKMGYSIVAGSLTVAIIILPVIIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVL 181

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST--------EKGS 551
           P   P  ++G I + G     S  + + + G +     G+       T        E G 
Sbjct: 182 PSAIPGILSGVILSVGRIIGES-AAILLTAGTVAKMPGGIFDSARTLTVHSYLLTKESGD 240

Query: 552 FPEVVLGVLIMCCFVLALNRF 572
                   +++   VLALN  
Sbjct: 241 IATAASIGIVLIVIVLALNML 261


>gi|89067727|ref|ZP_01155181.1| hypothetical protein OG2516_00959 [Oceanicola granulosus HTCC2516]
 gi|89046697|gb|EAR52752.1| hypothetical protein OG2516_00959 [Oceanicola granulosus HTCC2516]
          Length = 553

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 70/524 (13%), Positives = 141/524 (26%), Gaps = 71/524 (13%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I  +LA +L++ I+ +LL    +       +         +        T    L   + 
Sbjct: 20  IAVILAVLLILPILRVLLLSFVDADTGGFTLGNYVEVFTRNYYVNGLKNTLFVGLMGTLG 79

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL-----GFL------TFTVVYFMNLY 127
           + L     A   A+    G   +  L I+  +         ++       F   +  +L 
Sbjct: 80  ACLLGIPLAFFTARFHIRGRAWISTLAILVLVAPPFIGAYAWIMMLGSNGFITNFLESLG 139

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                      I  +FT + +   F M Q +L  + +  E+ + +   + WQ+F  + +P
Sbjct: 140 ISIPTIYGAHGIILVFTLKFFPFVFLMTQTALNAVNKSFEDAAENLGCTPWQRFRQITLP 199

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
              P +    ++               +       + G G      I      + L  + 
Sbjct: 200 LVFPAISTGAIICFVLA----------IADFGTPAILGRGFRTLSTIAFAAYRSELGGLP 249

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
           TM   + +                 +     +    +    L R+               
Sbjct: 250 TMAVTVSI-----------------IMMAISMLALLAQRRILARRRYASSLTNLPVRQKL 292

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
           +   N    L     V+    P   +   S  + +          V G  +    +    
Sbjct: 293 TGWRNVAVHLSCHATVLIAMLPTLVVVYTSFLKTNGP------VFVGGYGLESYARIWRT 346

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                T   V  +  +  IT+F  ++  II                   +        L 
Sbjct: 347 APEAITNSFVFSIAAVILITVFSALISYIIV---------------RRETAASGAFDFLM 391

Query: 427 AFPANVFFPLVVSCVSYY---------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             P     P VV  + +            +    L LL       Y + +  +       
Sbjct: 392 MVP--YLVPGVVMAIGFVTTFRSGVFSGFSVGALLILLYFIRRLPYGVRSTTSSLRQIKP 449

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             +E A +        +  + +P I P  V G++     A N  
Sbjct: 450 SMEEAAVNLGAPPLMAFLKVTVPLIVPGLVVGSLMGFITAINEL 493



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 21/216 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN-----VFFPLVVSC 440
           T+F  ++  + A ++ IP+  +                +L            +  ++ S 
Sbjct: 69  TLFVGLMGTLGACLLGIPLAFFTARFHIRGRAWISTLAILVLVAPPFIGAYAWIMMLGSN 128

Query: 441 VSYYHLNPNLWLSLLMIFGT-----------QWYILFNVIAGASAFPNDFKEVASSFHIT 489
               +   +L +S+  I+G              ++        +A    F++ A +   T
Sbjct: 129 GFITNFLESLGISIPTIYGAHGIILVFTLKFFPFVFLMTQTALNAVNKSFEDAAENLGCT 188

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+ +R I LP +FP   TGAI     A        +   G   L T    A+ A  +E 
Sbjct: 189 PWQRFRQITLPLVFPAISTGAIICFVLAIADFGTPAILGRGFRTLSTI---AFAAYRSEL 245

Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585
           G  P + + V I+   +  L       +     R  
Sbjct: 246 GGLPTMAVTVSIIMMAISMLALLAQRRI--LARRRY 279


>gi|302551750|ref|ZP_07304092.1| permease membrane component [Streptomyces viridochromogenes DSM
           40736]
 gi|302469368|gb|EFL32461.1| permease membrane component [Streptomyces viridochromogenes DSM
           40736]
          Length = 281

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 11/196 (5%)

Query: 8   PPFISRRIFP-NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66
           P   + R  P          L+   +  +L          D+  +    L    + +   
Sbjct: 28  PAARAPRTAPVPRISRQKLTLLPVALAAVLLATWLWFRQADLDALTRNALSGGQVSKALW 87

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +       +    L+       L  +   R+   V +   +  Q+ P +G L   V++  
Sbjct: 88  QHIQLTAISTFFVLIIAIPLGILLTRETFRKATPVAMAFANTGQATPAIGLLALLVIWLG 147

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +IG  + AI  + +        +    L      L E  R   +S       + 
Sbjct: 148 IGRRAALIGMIIYAILPVLS--------NTITGLKANDPTLLEAGRGIGMSPMGVLTRVE 199

Query: 185 VPFSMPGLVWNMMMSM 200
           +P ++P ++  +  ++
Sbjct: 200 LPLAVPLILAGVRTAL 215



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 15/255 (5%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           + +       P        +++   +L +    V+    +      +  +  +      +
Sbjct: 23  QAVPEPAARAPRTAPVPRISRQKLTLLPVALAAVLLATWLWFRQADLDALTRNALSGGQV 82

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAAFPANVFFP 435
                  I +  +    ++  II IP+GI +        +     FA    A PA     
Sbjct: 83  SKALWQHIQLTAISTFFVL--IIAIPLGILLTRETFRKATPVAMAFANTGQATPAIGLLA 140

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L+V  +        + + +  I      +L N I G  A      E      ++      
Sbjct: 141 LLVIWLGIGRRAALIGMIIYAIL----PVLSNTITGLKANDPTLLEAGRGIGMSPMGVLT 196

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            + LP   P  + G  TA       + ++     G + +        I         P +
Sbjct: 197 RVELPLAVPLILAGVRTALVLNVGTATLAVFGGGGGLGV-------LITTGITNQRMPVL 249

Query: 556 VLGVLIMCCFVLALN 570
           VLG ++     L ++
Sbjct: 250 VLGSVLTVALALLVD 264


>gi|269797487|ref|YP_003311387.1| binding-protein-dependent transporters inner membrane component
           [Veillonella parvula DSM 2008]
 gi|282849112|ref|ZP_06258497.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|269094116|gb|ACZ24107.1| binding-protein-dependent transport systems inner membrane
           component [Veillonella parvula DSM 2008]
 gi|282580816|gb|EFB86214.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 217

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L      T    + + V+++L       +   + +        L  VL  I++  +S+P 
Sbjct: 9   LITGTLDTLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVALNKVLGAIVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   A +  +  + +  +   +  S+ +I   + E ++S 
Sbjct: 68  FIILMVAIIPFTRMVVGTSIGTTAACV-PLTIAAIPFLARLVETSIKDINFGVIEAAQSM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNM 196
             S  Q  W + +P ++P ++ N+
Sbjct: 127 GASPLQIIWKVLLPEALPTIIDNV 150



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T+   ++  ++A ++ IP+G+ +             ++  +        + P  +     
Sbjct: 16  TLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVALNKVLGAIVNATRSVPFIILMVAI 75

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P     V          + L +        L               E A S   +  + 
Sbjct: 76  IPFTRMVVGTSIGTTAACVPLTIAAIPFLARLVETS--IKDINFGVIEAAQSMGASPLQI 133

Query: 494 WRYIILPGIFPYYV 507
              ++LP   P  +
Sbjct: 134 IWKVLLPEALPTII 147


>gi|86358329|ref|YP_470221.1| iron(III) ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86282431|gb|ABC91494.1| iron(III) ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 564

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 72/513 (14%), Positives = 157/513 (30%), Gaps = 66/513 (12%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P        + V+ +  + L  +    +       +   L   SL      T +  +   
Sbjct: 12  PPWLFPFVVITVLILSVLPLARLAMVGIAAFANGGIIDVLSAPSLWSATYYTIVTSVVGT 71

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +ISL+   ++A L   +   G  L+    ++   IP        + +     P   +   
Sbjct: 72  MISLVIGCLFAFLLTLTDIRGKGLLSFFFVLPMMIPPQV---TALAWVQMSGPSSPLLKA 128

Query: 136 LAAIFAIFTSQ----------------VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           LA    + + Q                   +  ++   L  +PRD  E +R    S ++ 
Sbjct: 129 LAIAPPLGSPQPLYSVGGIALLYGVQHAPLVYLALRAGLMTLPRDGVEAARLSGASSFRV 188

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           F  + +P S+PG++    +S              V       +P                
Sbjct: 189 FSDIILPLSLPGIIAGAAIS-------------FVSCTGNFGIP---------------- 219

Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299
               A+L +   IF    L+F     ++++     T G     S ++ +      +    
Sbjct: 220 ----AILGIPASIFTLPTLVFTKFSAFTSR-----TFGDVAVLSAIIAMISVAGLMIQDR 270

Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359
                 +  +  +       LG  RF F      + S    +    +    +V    + +
Sbjct: 271 ALRGRDYRVIGLSGASAAVELGAWRFLFTPILWAILSFMLAAPFFALVAGALVPAYGVPL 330

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKI 418
            ++++                     ++       +   ++ +     +  R    S  I
Sbjct: 331 TFKTMSLHAFEEILFRQAVTRTAFVNSISLAGATAVCLLVVTVLAAYMLTRRKDAASRII 390

Query: 419 QPFAQLLAAFP----ANVFFPLVVSCVSYYHLNP--NLWLSLLMIFGTQWYI-LFNVIAG 471
               ++  + P    A  F  L  + + + H++    +W+ L+  F   + + L  V++ 
Sbjct: 391 ASLIEIPYSLPGIVMAVAFILLFAAPIPFLHISLYGTIWIILIAYFSWFFAVSLKPVVSA 450

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                   +E A       +R    II+P I P
Sbjct: 451 FHQLDPALEEAARLSGAGFFRRLSDIIVPLIAP 483


>gi|51894353|ref|YP_077044.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51858042|dbj|BAD42200.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 556

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 92/569 (16%), Positives = 181/569 (31%), Gaps = 64/569 (11%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------DVHSLPQYASRTTLRMLS 74
           L+  +LV G + + +       + + ++    I+L           + +    T L   +
Sbjct: 19  LVTILLVAGALWLFIVNPIFQVLKQSVMTPSGISLQAYWDVISSERIVKIFGNTLLLCTT 78

Query: 75  AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFM--NLYPGKV 131
             +I+    F++A   A  +     L   L I+  + P        ++ F    L    +
Sbjct: 79  VSLIATAIGFLFAYAVAYVKIPLKGLFRTLAILPVVSPPFVVSLSAILLFGRTGLITRTL 138

Query: 132 IGAELAAIF------AIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +G E A I+       +     + +TF     L  NI   LEE SR+   S WQ F  + 
Sbjct: 139 LGIENANIYGFGGLVLVMVLSEFPVTFLTLIGLLQNIDVSLEEASRNAGASRWQVFRTVT 198

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P  +PGL  N  + +        ++ M++ G+ ++    I      AI   DL     A
Sbjct: 199 LPLLLPGL-ANAFLLVFIQALADFSNPMVIGGNFMVLAVQI---YQQAIGGYDLQ-GGSA 253

Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304
           +  +L  I +    + R  +  + +  +  T       S +   +        +   +  
Sbjct: 254 VAVLLLFITVAVFTIQRYWL--AGRSYVTVTGKPARERSQITDPWVVWPLFTVLSLITLV 311

Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364
                +         L  I + F  +  +      +  + D     ++     G     I
Sbjct: 312 VIGMYALIPINAFIKLWGINWTFTLDNFKYVLGLGMKPIYDTTRLALISAPIAGFLGMII 371

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424
            Y+V                I    ++ L I  ++I I  G  + F              
Sbjct: 372 AYLVTK------KRFFGRSVIEFVSMLSLAIPGTVIGI--GYILAFNK------------ 411

Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
               P  V                   L +  IF      + + IA         +E + 
Sbjct: 412 ----PPIVL------------TGTGTILVIAFIFRNMPVGIRSGIAALQQIDPSMEEASI 455

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
           +   T  + +  ++LP +   + +G + +   A  A            +L TT     I 
Sbjct: 456 NMGATTTQTFMKVMLPLMGSAFFSGLLYSFVRAMTAVSQVIFLVSAKYNLLTT----AIL 511

Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + G +       +++   VLA+   L
Sbjct: 512 NQVDVGRWGYASAYSVVLILIVLAVTVLL 540


>gi|326693647|ref|ZP_08230652.1| phosphate ABC transporter permease [Leuconostoc argentinum KCTC
           3773]
          Length = 294

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 74/184 (40%), Gaps = 6/184 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            ++A +L   + +IL+ G+   +                 +      +   ++ AM IS 
Sbjct: 19  GIVALILAGMLASILVRGVPHLSWHFLTAPAKAFE-AGGGIGVQLFNSFYLLVLAMAISF 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
                 A      A+   L  ++   ++I+ S+P +    F  + F+  +   +  + L+
Sbjct: 78  PIALAAAIYLNEYARKGPLTTIVRTAIEILSSLPSVVVGLFGFLLFVVKF--HLGFSILS 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
              A+    +  +T S+  SL  IP    E   +  LS W+   ++ +P ++P +V  ++
Sbjct: 136 GAIALTFFNLPLLTRSIETSLAQIPNLQREAGSALGLSRWETVIHVILPAAVPSIVTGVV 195

Query: 198 MSMS 201
           +S  
Sbjct: 196 LSAG 199



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 15/203 (7%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCI 385
           +   +  +++  +      +V  +  G+    +   V H ++                 +
Sbjct: 1   MNAKTADKIATGIIYMISGIVALILAGMLASILVRGVPHLSWHFLTAPAKAFEAGGGIGV 60

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP-LVVSCVSY 443
            +F    L+++A  I  P+ +      +  ++  P   ++  A       P +VV    +
Sbjct: 61  QLFNSFYLLVLAMAISFPIALAAAIYLNEYARKGPLTTIVRTAIEILSSLPSVVVGLFGF 120

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRY 496
                   L   ++ G      FN+     +            +E  S+  ++ W    +
Sbjct: 121 LLFVVKFHLGFSILSGAIALTFFNLPLLTRSIETSLAQIPNLQREAGSALGLSRWETVIH 180

Query: 497 IILPGIFPYYVTGAITACGGAWN 519
           +ILP   P  VTG + + G  + 
Sbjct: 181 VILPAAVPSIVTGVVLSAGRVFG 203


>gi|323141183|ref|ZP_08076084.1| molybdate ABC transporter, permease protein [Phascolarctobacterium
           sp. YIT 12067]
 gi|322414326|gb|EFY05144.1| molybdate ABC transporter, permease protein [Phascolarctobacterium
           sp. YIT 12067]
          Length = 227

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
           K+  + LA + A     +  M  S   +L  + + + E +RS  ++ W+ FW + +P ++
Sbjct: 86  KIAFSWLATVLAAAVISLPLMYRSARGALSQVDKGMLEAARSLGMTEWRIFWRIHLPNAL 145

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++   +++ + G     A+ MI  G+       +   +  A+   D  A  + +  ++
Sbjct: 146 PGIIAGGLLAFARGLGEFGATAMIA-GNIAGRTRTLPLAVYSAVAAGDWDAAGWYVAVIV 204

Query: 250 GVIFLY 255
           G+  L 
Sbjct: 205 GICLLV 210



 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 5/109 (4%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530
             S       E A S  +T WR +  I LP   P  + G + A          + + + G
Sbjct: 113 ALSQVDKGMLEAARSLGMTEWRIFWRIHLPNALPGIIAGGLLAFARGLGEFGATAMIA-G 171

Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC----CFVLALNRFLWH 575
           +I  RT  L   +  +   G +      V ++       V+ LN +L+ 
Sbjct: 172 NIAGRTRTLPLAVYSAVAAGDWDAAGWYVAVIVGICLLVVIGLNVYLYK 220


>gi|269102359|ref|ZP_06155056.1| phosphate transport system permease protein PstC [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162257|gb|EEZ40753.1| phosphate transport system permease protein PstC [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 304

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 82/216 (37%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA-------SR 67
            F N+F L A + ++ ++ I     +E         +  I      LP            
Sbjct: 29  FFKNLFLLSAAIGILSLVTIGYFIFREGFAAFAHSGVTGIVFGQDWLPPALYGIAPMIVA 88

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           +      A++I +    + A   A+   + +  ++ P+++++  IP + +    L   V 
Sbjct: 89  SLASTFGAVLIGVPIALLTAVFIAEVAPKPVANIVRPMIELLAGIPSVVYGFFGLVIIVP 148

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +L+      + LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 149 MIQDLFNVPAGNSILAGIIVLAIMILPTVIAVSETSIRAVPRTYKEGSLALGASHMFTIF 208

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L +P +  G++  +++ ++      +A  M++   
Sbjct: 209 RLLIPAARSGIMTGVILGIARALGETMAIIMVMGNS 244



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 78/223 (34%), Gaps = 11/223 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-VIW 381
            R  F +N   L +   +  ++ I +F    G A        G +         LY +  
Sbjct: 25  WRELFFKNLFLLSAAIGILSLVTIGYFIFREGFAAFAHSGVTGIVFGQDWLPPALYGIAP 84

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVF--FPLV 437
           +   ++      ++I   I +   ++I       +++ ++P  +LLA  P+ V+  F LV
Sbjct: 85  MIVASLASTFGAVLIGVPIALLTAVFIAEVAPKPVANIVRPMIELLAGIPSVVYGFFGLV 144

Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGW 491
           +       L       ++   ++++       +  V      A P  +KE + +   +  
Sbjct: 145 IIVPMIQDLFNVPAGNSILAGIIVLAIMILPTVIAVSETSIRAVPRTYKEGSLALGASHM 204

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
                +++P      +TG I     A   ++   +       +
Sbjct: 205 FTIFRLLIPAARSGIMTGVILGIARALGETMAIIMVMGNSPAM 247


>gi|260881191|ref|ZP_05403824.2| putrescine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260849751|gb|EEX69758.1| putrescine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 284

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 19/262 (7%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70
           ++R          A  +V+ +  +  HG+ +      + ++           Q    +  
Sbjct: 8   VARLFAAPFAIWAAIFIVLPLFFVFYHGLTDGQGAFTLANLWEAV--QLEYLQALGLSVE 65

Query: 71  RMLSAMVISLLFTFVYATLAAKSRRLGMV-----------LVPILDIM--QSIPILGFLT 117
             L + +I L+  +    +  + +R  M+           +  +L  M  Q+I     + 
Sbjct: 66  LALISTLICLVLAYPLCMILQQIKRGRMLLIFLLFLLPLWMNSLLTTMAWQTILEKNGII 125

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V++ + L    +I   LA +  +  + +  M   +Y SL +I + + E +       W
Sbjct: 126 NMVLHALALPEVTLINTPLAIVIGMVYNFLPYMVLPLYVSLSHIDKSIIEAAHDLGAGHW 185

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q F  +  P S+PG++    M         V S ++     ++    IG+ I        
Sbjct: 186 QTFRRIVFPLSLPGVISGCTMVFIPALTTFVISALLGGNKILL----IGNIIEQEFTAAY 241

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
              +  A+  +L V  + + +L
Sbjct: 242 DWQLGSALSMILMVFIILNIVL 263



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 4/137 (2%)

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
            ++      +N  L + + M++    Y++  +    S       E A       W+ +R 
Sbjct: 131 ALALPEVTLINTPLAIVIGMVYNFLPYMVLPLYVSLSHIDKSIIEAAHDLGAGHWQTFRR 190

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556
           I+ P   P  ++G       A    ++S +     I L    +G  I +        ++ 
Sbjct: 191 IVFPLSLPGVISGCTMVFIPALTTFVISALLGGNKILL----IGNIIEQEFTAAYDWQLG 246

Query: 557 LGVLIMCCFVLALNRFL 573
             + ++    + LN  L
Sbjct: 247 SALSMILMVFIILNIVL 263


>gi|167770981|ref|ZP_02443034.1| hypothetical protein ANACOL_02335 [Anaerotruncus colihominis DSM
           17241]
 gi|167667021|gb|EDS11151.1| hypothetical protein ANACOL_02335 [Anaerotruncus colihominis DSM
           17241]
          Length = 222

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +    T + +L + V + +       L          ++R    V   I++I++S+P 
Sbjct: 12  LLEGTGATLVMVLGSTVCAYILGLPMGVLLRVTDRGGIMENRVFNSVFGWIVNILRSLP- 70

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   +  F  L  GK+IG   A +     +  + +   +  SL  I   + E ++  
Sbjct: 71  FIILMVALFPFTRLIMGKIIGTAAACVPLTIAAAPF-VARLVESSLSEIDNGVVEAAKCM 129

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +  Q    + +P S+P L+  + ++
Sbjct: 130 GATNGQIILRVMLPESLPSLIRGLSIT 156



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 14/147 (9%)

Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA 430
           ++     T+  V+   + A I+ +P+G+         I      +S       +L + P 
Sbjct: 12  LLEGTGATLVMVLGSTVCAYILGLPMGVLLRVTDRGGIMENRVFNSVFGWIVNILRSLPF 71

Query: 431 N----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                  FP     +          + L +        L  V +  S   N   E A   
Sbjct: 72  IILMVALFPFTRLIMGKIIGTAAACVPLTIAAAPFVARL--VESSLSEIDNGVVEAAKCM 129

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITA 513
             T  +    ++LP   P  + G    
Sbjct: 130 GATNGQIILRVMLPESLPSLIRGLSIT 156


>gi|317484886|ref|ZP_07943776.1| phosphate ABC transporter [Bilophila wadsworthia 3_1_6]
 gi|316923868|gb|EFV45064.1| phosphate ABC transporter [Bilophila wadsworthia 3_1_6]
          Length = 291

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 65/184 (35%), Gaps = 5/184 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + ++G+   LL           + +     +    +      T L    AM+I+   
Sbjct: 30  INILALVGVCVFLLWNGSPAISWEFLTEPPRRMMTAGGVWPCIVGTFLLAFGAMLIAFPL 89

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A          R    L   +  +  +P + F  F + +F+      V  + LA +
Sbjct: 90  GVASAVYLHEYGGKGRYTRYLRLGISNLAGVPSVVFGLFGLAFFVTFLGMGV--SLLAGV 147

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +  +  ++L  +P    E S +   +  Q    + +P ++PG++   ++ 
Sbjct: 148 LTLAVLTLPVIINTTEEALRQVPDAWREASLALGATRSQTIARVVLPAAVPGMLTGAILG 207

Query: 200 MSGG 203
           ++  
Sbjct: 208 LARA 211



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGI 406
              + GV + + W     I   F  +    ++  G +   +    +L   A +I  P+G+
Sbjct: 32  ILALVGVCVFLLWNGSPAISWEFLTEPPRRMMTAGGVWPCIVGTFLLAFGAMLIAFPLGV 91

Query: 407 WI-------GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIF 458
                    G +   +  ++     LA  P+ VF    ++    +  +  +L   +L + 
Sbjct: 92  ASAVYLHEYGGKGRYTRYLRLGISNLAGVPSVVFGLFGLAFFVTFLGMGVSLLAGVLTLA 151

Query: 459 GTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                ++ N         P+ ++E + +   T  +    ++LP   P  +TGAI     A
Sbjct: 152 VLTLPVIINTTEEALRQVPDAWREASLALGATRSQTIARVVLPAAVPGMLTGAILGLARA 211


>gi|302380498|ref|ZP_07268963.1| phosphate ABC transporter, permease protein PstA [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311441|gb|EFK93457.1| phosphate ABC transporter, permease protein PstA [Finegoldia magna
           ACS-171-V-Col3]
          Length = 291

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 87/220 (39%), Gaps = 8/220 (3%)

Query: 3   LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHS 60
           L N+       RI      L+AF+ +  +  ++++ +      +   +      + +V  
Sbjct: 13  LKNLRKNKTKSRIIKGFIYLMAFITLAVLFYLIIYMLVNGIPHLKPSMFSNHYTSKNVSM 72

Query: 61  LPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +P          L +L A  I +      +  + K+ ++  ++    + +  IP + +  
Sbjct: 73  MPSIKTTIILVLLTLLIASPIGIFTAIYLSEYSKKNSKVVTLIRLATETLSGIPSIVYGL 132

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F ++ F+     K   + ++ +  +F   +  +  +  Q+L +I  +L   S +      
Sbjct: 133 FGMLLFVMRL--KFRYSLISGVLTMFIMVLPLIIRASEQALLSIDDELRAGSYALGAGKL 190

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
                + +P +MPG++  +++S+        A+ M  +G 
Sbjct: 191 YTIRKVLLPVAMPGIMAGIILSIGRV-VGETAALMFTLGT 229



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 67/201 (33%), Gaps = 14/201 (6%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--------LYVI 380
           +N  +  +  R+          +   V   +    +   + H              + ++
Sbjct: 14  KNLRKNKTKSRIIKGFIYLMAFITLAVLFYLIIYMLVNGIPHLKPSMFSNHYTSKNVSMM 73

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA----QLLAAFPANVFFPL 436
                T+  V++ ++IAS I I   I++      +SK+        + L+  P+ V+   
Sbjct: 74  PSIKTTIILVLLTLLIASPIGIFTAIYLSEYSKKNSKVVTLIRLATETLSGIPSIVYGLF 133

Query: 437 VVSCVS-YYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWW 494
            +           +L   +L +F     ++         +  ++ +  + +         
Sbjct: 134 GMLLFVMRLKFRYSLISGVLTMFIMVLPLIIRASEQALLSIDDELRAGSYALGAGKLYTI 193

Query: 495 RYIILPGIFPYYVTGAITACG 515
           R ++LP   P  + G I + G
Sbjct: 194 RKVLLPVAMPGIMAGIILSIG 214


>gi|297243360|ref|ZP_06927293.1| ABC-type metal ion transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888607|gb|EFH27346.1| ABC-type metal ion transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 226

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 18/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T +    A + + L       L   S +        +  VL  I++I++S+P 
Sbjct: 16  LIEGVQDTLVMTSVATLFAYLIGLPVGVLLITSNKKGICPNAPINAVLGWIVNIVRSVP- 74

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  +G   A +  + T+  + +   + QSL  +   L E ++SF
Sbjct: 75  FIILLVAIIPFTRLIVGTSLGVPGAIVPLVITAAPF-VARVVEQSLAEVDGSLIEAAQSF 133

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-YIAL 231
             S  Q    + +  ++P L+    ++    + F   +  +  G       G+G   I  
Sbjct: 134 GASKLQIVCKVLLWEALPSLIRGAALTFITLFGFSAMAGTVGAG-------GLGDIAIRY 186

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +      +  A++  + ++ +   L
Sbjct: 187 GYQRYQYDVMTVAVILCIILVQIVQSL 213



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 20/193 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+    V  + A +I +PVG+ +             I++ +     ++ + P  +    +
Sbjct: 23  TLVMTSVATLFAYLIGLPVGVLLITSNKKGICPNAPINAVLGWIVNIVRSVPFIILLVAI 82

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    L     +  L+I    + +   V    +       E A SF  +  +  
Sbjct: 83  IPFTRLIVGTSLGVPGAIVPLVITAAPF-VARVVEQSLAEVDGSLIEAAQSFGASKLQIV 141

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFP 553
             ++L    P  + GA       +  S ++     G       GLG   I    ++  + 
Sbjct: 142 CKVLLWEALPSLIRGAALTFITLFGFSAMAGTVGAG-------GLGDIAIRYGYQRYQYD 194

Query: 554 EVVLGVLIMCCFV 566
            + + V++    V
Sbjct: 195 VMTVAVILCIILV 207


>gi|326790691|ref|YP_004308512.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326541455|gb|ADZ83314.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 219

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLT 117
             T    L + +++ +                   S+ L  +L  I++I +S+P L  L 
Sbjct: 15  FETLYMTLFSTLLAYMIGLPLGIALVVTEKGNLLPSKWLNSILNVIVNITRSVPFLILLI 74

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +  F     G  IG+    +  +  +  + +   +  S+  +   + E + S   + +
Sbjct: 75  F-IQPFTRWVVGTTIGSTATVVPLVVAAAPF-IGRMVESSIKELDHGIIEAALSMGATPF 132

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
           Q  W + +P + P L     ++ +    +   +     G       G+G         + 
Sbjct: 133 QIIWKVMLPETKPSLWIGASITATTILGYSAMAGFTSGG-------GLGDVAIRYGVHRY 185

Query: 238 LLAILYAMLTMLGVIFLYDQ 257
              ++   + +L +I    Q
Sbjct: 186 QTEVMLVTVILLIIIVQCIQ 205



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 13/195 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++  +   ++A +I +P+GI +             ++S +     +  + P  +    +
Sbjct: 17  TLYMTLFSTLLAYMIGLPLGIALVVTEKGNLLPSKWLNSILNVIVNITRSVPFLILLIFI 76

Query: 438 ---VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 V    +     +  L++    + I   V +      +   E A S   T ++  
Sbjct: 77  QPFTRWVVGTTIGSTATVVPLVVAAAPF-IGRMVESSIKELDHGIIEAALSMGATPFQII 135

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P    GA          S ++   S G +       G +    TE      
Sbjct: 136 WKVMLPETKPSLWIGASITATTILGYSAMAGFTSGGGLGDVAIRYGVH-RYQTEVMLVTV 194

Query: 555 VVLGVLIMCCFVLAL 569
           ++L +++ C   + +
Sbjct: 195 ILLIIIVQCIQGIGM 209


>gi|220904809|ref|YP_002480121.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869108|gb|ACL49443.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 235

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 83/200 (41%), Gaps = 18/200 (9%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFL 116
              T   +L +   SL+  F+ A L   +        R +  ++  ++++++S P    L
Sbjct: 33  TWETVQMVLISTFFSLVIGFMLAILMIVTNPIGLKPCRSVYRIVDFVVNLLRSFP-FIIL 91

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F  +  G  IG+  AAI  +  +    +   +      + R + E +RSF  S 
Sbjct: 92  LIAIIPFTRMVVGTSIGSG-AAIVPLTIAAAPFVARLIETCFLEVDRGVIEAARSFGASN 150

Query: 177 WQKFWYLGVPFSMPGLVWNM-MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            Q  + +  P ++P +V N+ +++++   +  +A  +   G   +        +      
Sbjct: 151 AQIIFRVLFPEALPSIVLNIAVIAITLLGYSAMAGTVGGGGLGDLA-------VKYGYNR 203

Query: 236 QDLLAILYAMLTMLGVIFLY 255
             +  ++Y+++ +  ++ L 
Sbjct: 204 FQVDIMVYSVIILCVLVLLI 223



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 62/214 (28%), Gaps = 12/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
            W+ +   +          V  +   T F +V+  ++A ++ +   I +     +   + 
Sbjct: 18  LWERLQDKMPEILMATWETVQMVLISTFFSLVIGFMLAILMIVTNPIGLKPCRSVYRIVD 77

Query: 420 PFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
               LL +FP  +      P     V     +    + L +        L          
Sbjct: 78  FVVNLLRSFPFIILLIAIIPFTRMVVGTSIGSGAAIVPLTIAAAPFVARLIETCF--LEV 135

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
                E A SF  +  +    ++ P   P  V             S ++     G +   
Sbjct: 136 DRGVIEAARSFGASNAQIIFRVLFPEALPSIVLNIAVIAITLLGYSAMAGTVGGGGLGDL 195

Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
               G        +     +V  V+I+C  VL +
Sbjct: 196 AVKYGY------NRFQVDIMVYSVIILCVLVLLI 223


>gi|212691392|ref|ZP_03299520.1| hypothetical protein BACDOR_00884 [Bacteroides dorei DSM 17855]
 gi|212666002|gb|EEB26574.1| hypothetical protein BACDOR_00884 [Bacteroides dorei DSM 17855]
          Length = 295

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 70/210 (33%), Gaps = 14/210 (6%)

Query: 4   YNILPPFISRRIFPNIFDLLAF---------VLVIGIINILLHGIQETTVPRDIVDIVPI 54
            ++ P     R   + +              +++  I+  +++          +      
Sbjct: 3   QDVFPARQGARKRRSQWLAFGIFKLLSYSIVLILFAILGFIIYKGIGVISWEFLTTAPSD 62

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP 111
            +    +      T   M+ + + +     +        A   ++   +  + + +  IP
Sbjct: 63  GMTGGGIWPAIVGTFYLMVGSALFAFPVGVMSGIYMNEYAPKGKMVRFIRMMTNNLSGIP 122

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + F  F +  F+         + LA    +    V  +  +  ++L  IP    E S +
Sbjct: 123 SIVFGLFGMALFVKYMGFGD--SILAGSLTLGLLCVPLVIRTTEEALKAIPDSFREGSLA 180

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              +  Q  W++ +P  MP ++  +++++ 
Sbjct: 181 LGATKLQTIWHVILPMGMPNIITGLILALG 210



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 12/182 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           ++ I +  +   +  GI   S  ++    +       IW   +  F ++V    +++   
Sbjct: 32  IVLILFAILGFIIYKGIGVISWEFLTTAPSDGMTGGGIWPAIVGTFYLMVG---SALFAF 88

Query: 403 PVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLS 453
           PVG+  G           +   I+     L+  P+ VF  F + +        +  L  S
Sbjct: 89  PVGVMSGIYMNEYAPKGKMVRFIRMMTNNLSGIPSIVFGLFGMALFVKYMGFGDSILAGS 148

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L +       ++        A P+ F+E + +   T  +   ++ILP   P  +TG I A
Sbjct: 149 LTLGLLCVPLVIRTTEEALKAIPDSFREGSLALGATKLQTIWHVILPMGMPNIITGLILA 208

Query: 514 CG 515
            G
Sbjct: 209 LG 210


>gi|160900232|ref|YP_001565814.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160365816|gb|ABX37429.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
          Length = 579

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 59/486 (12%), Positives = 145/486 (29%), Gaps = 66/486 (13%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFM-- 124
           +    L+++  + L     A L  +    G +L+  L ++  I P         + F   
Sbjct: 82  SLGVSLASVFFASLIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVALQLIFGRS 141

Query: 125 ----------NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174
                       +   ++      IF         +  ++  ++ NI   +EE + +   
Sbjct: 142 GSVNLLLDDWFGFTVPIMEGLTGVIFVESIHYFPFILLNLVAAMRNIDGAMEESALNLGS 201

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
            G++ F  +  P +MPG +    +     +  +    ++ V + + P     +Y+ +   
Sbjct: 202 RGFRLFRRVIFPLAMPGYLAGAALVFVKVFDDLGTPLVMGVTNMLAPQ----AYLRITSV 257

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294
             D        + M+    +   L  R M       + +    +    S      +K   
Sbjct: 258 GLDDPLGYVISVIMIAFSIVALWLAARVM-------KGKDYATLQKGGS----ALQKRRL 306

Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354
             +    ++ + + +   V      + ++ F    +F  L  +  + +   +F       
Sbjct: 307 SAWEALLAYGWIALVLLVVLAPHIGILLMSFSKVWSFSVLPDSYTLEHYATVF------- 359

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH- 413
                                     ++   T+   ++   I  +I   +   I      
Sbjct: 360 ----------------------TDSGYMIGNTLLYCLMAAGIDVVIGTAIAYLILRTRLP 397

Query: 414 ISSKIQPFAQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFG----TQWYIL 465
               +   A +  A P    A  +  L       +   P +   +L++         Y L
Sbjct: 398 ARQWLDYLASVALAIPGLVLAIGYLRLFKGVNLPFTDTPIVTTWVLIMLAYAVRRLPYAL 457

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
            + +A         +E A S         R +++P +    + G +T+   A      + 
Sbjct: 458 RSCMAALQQVHISLEEAAQSLGAGRTSVIRRVMVPLMAGGILAGFVTSFITAAVELSATI 517

Query: 526 VASWGH 531
           + +   
Sbjct: 518 MLASAQ 523


>gi|328886649|emb|CCA59888.1| Predicted rhamnose oligosaccharide ABC transport system, permease
           component 2 [Streptomyces venezuelae ATCC 10712]
          Length = 352

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 13/149 (8%)

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVW----NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
           F+ L PG  IG     I+A+    VW     M       L  +PR+L E ++      W+
Sbjct: 193 FLGLEPGGWIGDPDRIIYALVALTVWQFGAPMVI-FLAGLKQVPRELYEAAQVDGAGPWR 251

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-------YIAL 231
           +FW + +P   P L +N+++      F +  S  I+        P  G+       YI  
Sbjct: 252 RFWSITLPMISPVLFFNVLLETIHS-FQIFGSAYIIGSQGNACGPADGTLVYTCYLYIQG 310

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
               +  LA   A + +L V  +   L +
Sbjct: 311 FENSRMGLASAMAWMLLLAVAVVTAFLFW 339


>gi|307320626|ref|ZP_07600040.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
 gi|306893776|gb|EFN24548.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium meliloti AK83]
          Length = 299

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + + ++SL  +   A    + R  G   V +L  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTILSLAASVFAAYAIERVRFTGARPVGLLIFLAYLVPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  ++LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKF----GIYDSKLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGATRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTVPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 ALMAGALFGSLPVVILYSFFV 286



 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 12/166 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            I Y++   +Y   L+       TM   V   I++    +     I       ++     
Sbjct: 79  HIKYLLFETSYPGWLWN------TMLVAVGSTILSLAASVFAAYAIERVRFTGARPVGLL 132

Query: 423 QLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPND 478
             LA    P+ +F PL      +   +  L L              L        + P +
Sbjct: 133 IFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLLMGYF--RSIPFE 190

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            +E A     T W+    IILP   P  ++  I A   +WN  I +
Sbjct: 191 LEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|291532148|emb|CBL05261.1| molybdate ABC transporter, permease protein [Megamonas hypermegale
           ART12/1]
          Length = 220

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 78/198 (39%), Gaps = 17/198 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK-- 130
           L    ++ + TF+    AA+           +D + ++P L      V +F+ L+ GK  
Sbjct: 10  LKTAGLATVITFILGIYAARFICKLKKYQGFIDGIITLP-LVLPPTVVGFFLLLFLGKNS 68

Query: 131 ------------VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                       +I +  A +          M  +   +   I +DL   +R+  +S  +
Sbjct: 69  FIGQFLALFDINIIFSWPATVITAVVVSFPLMYRTTRGAFEQIDKDLIFAARTLGMSEEK 128

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD- 237
            FW + +P +  G++   ++S +       A+ M+  G+       + + I  A++  D 
Sbjct: 129 IFWKIILPLAKSGILAGAILSFARALGEFGATIMLA-GNIPGKTQTVSTAIYSAVQANDQ 187

Query: 238 LLAILYAMLTMLGVIFLY 255
             A ++A + ++  + + 
Sbjct: 188 ETAFVWAGIIIVVSLMVM 205



 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 23/194 (11%)

Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           + G I     + L++  +++   + +++G             Q LA F  N+ F      
Sbjct: 37  YQGFIDGIITLPLVLPPTVVGFFLLLFLGKNSF-------IGQFLALFDINIIF------ 83

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIIL 499
                   +   +++      + +++    GA      D    A +  ++  + +  IIL
Sbjct: 84  --------SWPATVITAVVVSFPLMYRTTRGAFEQIDKDLIFAARTLGMSEEKIFWKIIL 135

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559
           P      + GAI +   A      + + + G+I  +T  +   I  + +        +  
Sbjct: 136 PLAKSGILAGAILSFARALGEFGATIMLA-GNIPGKTQTVSTAIYSAVQANDQETAFVWA 194

Query: 560 LIMCCFVLALNRFL 573
            I+    L +   +
Sbjct: 195 GIIIVVSLMVMVLM 208


>gi|260596620|ref|YP_003209191.1| DL-methionine transporter permease subunit [Cronobacter turicensis
           z3032]
 gi|260215797|emb|CBA28237.1| D-methionine transport system permease protein metI [Cronobacter
           turicensis z3032]
          Length = 217

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ +L  +L  +++I +SI
Sbjct: 7   WLLVRGIWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSALVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F     G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRTIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPSGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPMQIVRKVLLPEALPGLVNAATITL 154



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 12/176 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E + +   T  +  
Sbjct: 76  IPFTRTIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPSGLIEASRAMGATPMQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           R ++LP   P  V  A          S +      G +       G     +T   
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMN 190


>gi|258543252|ref|YP_003188685.1| D-methionine transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634330|dbj|BAI00306.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256637388|dbj|BAI03357.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256640440|dbj|BAI06402.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256643497|dbj|BAI09452.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256646552|dbj|BAI12500.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256649605|dbj|BAI15546.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256652593|dbj|BAI18527.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256655649|dbj|BAI21576.1| D-methionine transporter permease protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 224

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL--------DIMQSIPI 112
           L      T + +L +  I++LF    A     + R G+  +P+L        D ++++P 
Sbjct: 9   LWHATGETLIMVLVSGFIAVLFGLPLAVFMVVAGRGGLYPLPVLPRLLGVVIDAIRAVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  +G   AAI  +  + +         SL  +   L +  R+ 
Sbjct: 68  FIILLVLLIPFTRMVVGSALGTT-AAIVPLSIAAIPYFARIAEVSLREVDHGLVDAVRAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             + W    Y+ +P SMP LV  + +++      +V +  +      I   G+G      
Sbjct: 127 GGTRWMVIRYVLLPESMPALVSGITVTL----VTLVGASAMAG---TIGAGGLGDLAIRY 179

Query: 233 IKEQDLLAILYAMLTMLGVIF 253
             ++    ++  ++ +L V+ 
Sbjct: 180 GYQRFNTTVMLGVVAVLIVLV 200



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 63/201 (31%), Gaps = 11/201 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V+V   IA +  +P+ +++           P +   +      + A P  +   L+
Sbjct: 16  TLIMVLVSGFIAVLFGLPLAVFMVVAGRGGLYPLPVLPRLLGVVIDAIRAVPFIILLVLL 75

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +      Y             +   +   +   T W   R
Sbjct: 76  IPFTRMVVGSALGTTAAIVPLSIAAIPYFARIAEVSLREVDHGLVDAVRAMGGTRWMVIR 135

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           Y++LP   P  V+G          AS ++     G +       G     +T       V
Sbjct: 136 YVLLPESMPALVSGITVTLVTLVGASAMAGTIGAGGLGDLAIRYGYQRFNTTVMLGVVAV 195

Query: 556 VLGVLI-MCCFVLALNRFLWH 575
           ++ ++  M      L+R L H
Sbjct: 196 LIVLVTGMQALGNWLSRILRH 216


>gi|213964888|ref|ZP_03393087.1| ABC D-methionine transporter, permease component [Corynebacterium
           amycolatum SK46]
 gi|213952424|gb|EEB63807.1| ABC D-methionine transporter, permease component [Corynebacterium
           amycolatum SK46]
          Length = 233

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 16/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L +   +T   +  AM+I  +       L          +++ +  VL  +++ ++ IP 
Sbjct: 25  LGEAFGQTLYMVCVAMLIGGVAGLAIGVLLYTTRDGGVLRNKFVYQVLNVLINFVRPIP- 83

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   +        G  IG E AA+F +  +  + +   + Q+L +I   + E +R+ 
Sbjct: 84  FIILVTAIGPLTKNVVGTTIGTE-AAVFVMSIAATFAIARLVEQNLMSIDPGVIEAARAM 142

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S W+    + VP ++  LV      +   + F+   +M  +   +         I   
Sbjct: 143 GASPWRIIRTVVVPEALGPLV------LGYTFAFIAVVDMSAMAGYIGGGGLGNFAITYG 196

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
            +  D    L   L ++ ++ L    
Sbjct: 197 YQAFDWNVTLVTTLVIIFIVQLAQIF 222



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 55/197 (27%), Gaps = 16/197 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V ++I  +  + +G+         +     +   +      +   P  +    +
Sbjct: 32  TLYMVCVAMLIGGVAGLAIGVLLYTTRDGGVLRNKFVYQVLNVLINFVRPIPFIILVTAI 91

Query: 438 VSCV--SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                              +M     + I   V     +      E A +   + WR  R
Sbjct: 92  GPLTKNVVGTTIGTEAAVFVMSIAATFAIARLVEQNLMSIDPGVIEAARAMGASPWRIIR 151

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            +++P      V       G  +    V ++++              I    +   +   
Sbjct: 152 TVVVPEALGPLV------LGYTFAFIAVVDMSAMAGYIGGGGLGNFAITYGYQAFDWNVT 205

Query: 556 VLGVLIMCCFVLALNRF 572
           ++  L++   V     F
Sbjct: 206 LVTTLVIIFIVQLAQIF 222


>gi|327475158|gb|AEA77174.1| PstC [Bacillus sp. 15.4]
          Length = 315

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 69  TLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
               + + VI++        ++A       + R+   L PIL+I+  IP + +  F   +
Sbjct: 92  LTGTIISSVIAMFVAIPVGLMSAVYLSEYATDRVRKTLKPILEILAGIPTIVYGFFAFTF 151

Query: 123 FMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQ 178
              L    +   E   I     +    +  M  S+   ++ ++P  + E + +   +  +
Sbjct: 152 VTPLIRSFIPAVEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNSMREGALALGATKLE 211

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
             W + +P ++ G++ + ++ +S  
Sbjct: 212 VTWKVVIPAAISGIISSFVLGISRA 236



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 27/224 (12%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF------- 433
           +   ++  +IA  + IPVG+             +   ++P  ++LA  P  V+       
Sbjct: 92  LTGTIISSVIAMFVAIPVGLMSAVYLSEYATDRVRKTLKPILEILAGIPTIVYGFFAFTF 151

Query: 434 -FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
             PL+ S +        L   ++M       +        S+ PN  +E A +   T   
Sbjct: 152 VTPLIRSFIPAVEPTNILSPGIVMGIMIIPMVASLSEDAMSSVPNSMREGALALGATKLE 211

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH------IHLRTTGLGAYIAES 546
               +++P      ++  +     A   +++  +AS  +      I      + AYI E 
Sbjct: 212 VTWKVVIPAAISGIISSFVLGISRAIGETMIVTIASGSNKNFTFDITQSMQTMTAYIVEV 271

Query: 547 T----EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           T      G+     L  + M  FV  L   L   +  Y +R  R
Sbjct: 272 TGGEAAAGTTIYYSLYAVAMTLFVFTLIMNL---IAQYISRRFR 312


>gi|319790469|ref|YP_004152102.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermovibrio ammonificans HB-1]
 gi|317114971|gb|ADU97461.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermovibrio ammonificans HB-1]
          Length = 280

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 72/190 (37%), Gaps = 8/190 (4%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
               +F L+    ++G   +L  G+   ++   I +      +   L       TL +L 
Sbjct: 19  TLAALFGLMWLFWILG--TLLYKGLSSLSLEVFIGNPPAPGDNTGGLKHAIVGQTLIVLL 76

Query: 75  AMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           A VI +    +  T      K  +L   +  + DIM S+P +   TF     +       
Sbjct: 77  ATVIGIPIGILAGTYLSEYGKGSKLANWVRDLSDIMMSVPSIVIGTFIYAVLVKPVGH-- 134

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
               +A   A+    +  +  +    L  +P +L E + +   + +Q    +    ++ G
Sbjct: 135 -FMGIAGSVALAIMMIPIILRTTDDMLRMVPPELREAAYALGATKFQVIKDVVYRAAITG 193

Query: 192 LVWNMMMSMS 201
           ++  ++++++
Sbjct: 194 ILTGVILAVA 203



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 64/183 (34%), Gaps = 8/183 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  + W   + G  +     S+   V                  +    +++++A++
Sbjct: 20  LAALFGLMWLFWILGTLLYKGLSSLSLEVFIGNPPAPGDNTGGLKHAIVGQTLIVLLATV 79

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
           I IP+GI  G           +++ ++  + ++ + P+ V    + + +     +     
Sbjct: 80  IGIPIGILAGTYLSEYGKGSKLANWVRDLSDIMMSVPSIVIGTFIYAVLVKPVGHFMGIA 139

Query: 453 SLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             + +      I+           P + +E A +   T ++  + ++        +TG I
Sbjct: 140 GSVALAIMMIPIILRTTDDMLRMVPPELREAAYALGATKFQVIKDVVYRAAITGILTGVI 199

Query: 512 TAC 514
            A 
Sbjct: 200 LAV 202


>gi|317497372|ref|ZP_07955695.1| sulfonate/nitrate/taurine transport system permease
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895441|gb|EFV17600.1| sulfonate/nitrate/taurine transport system permease
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 85

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557
           I P + P   TG  T+ G  +   + +E+ +        +G+G  + +++       +  
Sbjct: 2   IFPAVLPDIFTGLRTSLGVEYTTLVAAEMVA------AVSGIGWMVLDASNYLRSDIMFF 55

Query: 558 GVLIMCCFVLALNRFL 573
           G+++M    + L++ L
Sbjct: 56  GIILMGITGIVLDQIL 71



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +  P  +P +   +  S+   +  +VA+EM+        + GIG  +  A        + 
Sbjct: 1   MIFPAVLPDIFTGLRTSLGVEYTTLVAAEMVA------AVSGIGWMVLDASNYLRSDIMF 54

Query: 243 YAMLTMLGVIFLYDQLL 259
           + ++ M     + DQ+L
Sbjct: 55  FGIILMGITGIVLDQIL 71


>gi|15644018|ref|NP_229067.1| phosphate ABC transporter, permease protein [Thermotoga maritima
           MSB8]
 gi|148270633|ref|YP_001245093.1| phosphate ABC transporter, inner membrane subunit PstA [Thermotoga
           petrophila RKU-1]
 gi|281412943|ref|YP_003347022.1| phosphate ABC transporter, inner membrane subunit PstA [Thermotoga
           naphthophila RKU-10]
 gi|4981817|gb|AAD36336.1|AE001781_7 phosphate ABC transporter, permease protein [Thermotoga maritima
           MSB8]
 gi|147736177|gb|ABQ47517.1| phosphate ABC transporter, inner membrane subunit PstA [Thermotoga
           petrophila RKU-1]
 gi|281374046|gb|ADA67608.1| phosphate ABC transporter, inner membrane subunit PstA [Thermotoga
           naphthophila RKU-10]
          Length = 276

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 69/183 (37%), Gaps = 4/183 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +AF +V+ +  ++L G  +   P   +D     +    +      +   M+   +IS+  
Sbjct: 17  VAFAVVVIMFVLVLAGGVKYFSPSFFLDYPKNGMTEGGIFPAILGSFYLMVLTFLISIPL 76

Query: 83  TFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
                   ++  +  +   +   L  +  IP + +  F + +F             A   
Sbjct: 77  GIFTGVFLSEYGNNVIAKWIDISLTALSGIPSVVYGLFGLAFFCVALQFGTSMLAAALTL 136

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++ T  V  +  S  ++L  IP ++ E + +   +  +  + + +P +  G++  +++  
Sbjct: 137 SLMTLPV--IASSTRETLKAIPVEIREAALALGATKEEVIFKVLLPAARKGIITAVLVGG 194

Query: 201 SGG 203
              
Sbjct: 195 GRA 197



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 10/186 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASI 399
             +    F VV  + + +    + Y    F        +  G I   +     L+++  +
Sbjct: 12  RAVSYVAFAVVVIMFVLVLAGGVKYFSPSFFLDYPKNGMTEGGIFPAILGSFYLMVLTFL 71

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLW 451
           I IP+GI+ G          I+  I      L+  P+ V+  F L   CV+       L 
Sbjct: 72  ISIPLGIFTGVFLSEYGNNVIAKWIDISLTALSGIPSVVYGLFGLAFFCVALQFGTSMLA 131

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +L +   T   I  +      A P + +E A +   T       ++LP      +T  +
Sbjct: 132 AALTLSLMTLPVIASSTRETLKAIPVEIREAALALGATKEEVIFKVLLPAARKGIITAVL 191

Query: 512 TACGGA 517
              G A
Sbjct: 192 VGGGRA 197


>gi|89099174|ref|ZP_01172052.1| ABC-type phosphate transport system permease component [Bacillus
           sp. NRRL B-14911]
 gi|89086020|gb|EAR65143.1| ABC-type phosphate transport system permease component [Bacillus
           sp. NRRL B-14911]
          Length = 324

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 63/140 (45%), Gaps = 6/140 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYF 123
           T + ++ A+ I L      +  A  S R   ++ P+L+++  IP + +    LTF     
Sbjct: 108 TAIAVIVAVPIGLASAIFLSEYA--SDRTRRIIKPVLEVLAGIPTIVYGFFALTFVTPIL 165

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
            ++ P   I   L+    I       +      ++ ++PR + E + +   +  +  + +
Sbjct: 166 RDIIPSLEIFNALSPGIVIGIMITPMIASLSEDAMSSVPRAMREGALAMGSTKLEVAFKV 225

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P ++ G++ ++++++S  
Sbjct: 226 VLPAALSGIIASVVLAVSRA 245



 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 14/156 (8%)

Query: 394 IIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
             IA I+ +P+G+                 I+P  ++LA  P  V+    ++ V+    +
Sbjct: 108 TAIAVIVAVPIGLASAIFLSEYASDRTRRIIKPVLEVLAGIPTIVYGFFALTFVTPILRD 167

Query: 448 PNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWRYIIL 499
               L +         I   +            S+ P   +E A +   T       ++L
Sbjct: 168 IIPSLEIFNALSPGIVIGIMITPMIASLSEDAMSSVPRAMREGALAMGSTKLEVAFKVVL 227

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P      +   + A   A   +++  VA     +L 
Sbjct: 228 PAALSGIIASVVLAVSRAIGETMIVAVAGGSTPNLS 263


>gi|160947246|ref|ZP_02094413.1| hypothetical protein PEPMIC_01179 [Parvimonas micra ATCC 33270]
 gi|158446380|gb|EDP23375.1| hypothetical protein PEPMIC_01179 [Parvimonas micra ATCC 33270]
          Length = 275

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 79/212 (37%), Gaps = 17/212 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI--------MQSIPILGFL 116
             R+    + + V+ L+  + ++   +K +     ++ +L +        +++   +  L
Sbjct: 56  LLRSLRMAVLSTVLCLIIGYPFSYFISKFKVKTRNMMILLVVIPMWMNFLLRTYSWISIL 115

Query: 117 TF-----TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
           +      +++ F  L    ++ + ++ +  +  + +  M   +Y +L  I ++  E S  
Sbjct: 116 SKNGLLNSILNFFGLPTVNLMYSNVSILIGMVYNFLPFMILPIYTTLIKIDKEYIEASHD 175

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              +  + F  L  P S+PG++  + M           S ++      +    IG+ I  
Sbjct: 176 LGANRLKTFTKLVFPMSLPGVITGITMVFIPAISTFEISALLGGNKENL----IGNIIEQ 231

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263
             +         AM  +L V+ L    +    
Sbjct: 232 QFRVTGNWNFGSAMSMVLLVMILVSLFVMNKF 263



 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
              ++ E +        + +  ++ P   P  +TG       A +   +S +      +L
Sbjct: 165 IDKEYIEASHDLGANRLKTFTKLVFPMSLPGVITGITMVFIPAISTFEISALLGGNKENL 224

Query: 535 RTTGL--GAYIAESTEKGS-FPEVVLGVLIMCCFVL 567
               +     +  +   GS    V+L ++++  FV+
Sbjct: 225 IGNIIEQQFRVTGNWNFGSAMSMVLLVMILVSLFVM 260


>gi|145633813|ref|ZP_01789536.1| probable D-methionine transport system permease protein
           [Haemophilus influenzae 3655]
 gi|229845576|ref|ZP_04465703.1| ATP-dependent helicase HepA [Haemophilus influenzae 6P18H1]
 gi|144985316|gb|EDJ92151.1| probable D-methionine transport system permease protein
           [Haemophilus influenzae 3655]
 gi|229811511|gb|EEP47213.1| ATP-dependent helicase HepA [Haemophilus influenzae 6P18H1]
          Length = 229

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFL 116
              T     ++ ++++L                  ++ R   VL  I++I +SIP +  L
Sbjct: 25  TYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTHFVLNTIINIGRSIPFIILL 84

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +   +  +    +    AAI  +    +  +      +L  IP  L E +++   + 
Sbjct: 85  LILLP--VTRFIVGTVLGTTAAIIPLSICAIPFVARLTANALMEIPNGLTEAAQAMGATK 142

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
           WQ      +P ++P L+  + +++
Sbjct: 143 WQIVRKFYLPEALPTLINGITLTL 166



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 64/220 (29%), Gaps = 18/220 (8%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHIS 415
           +       T +    V      T++      ++A ++ +PVG+W        I       
Sbjct: 6   LATFSQQLTPKMWGIVATATYETVYISFASTLLAVLVGVPVGVWTFLTGKNEILQNNRTH 65

Query: 416 SKIQPFAQLLAAFPANVFFPLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
             +     +  + P  +   +++         +       + +      ++         
Sbjct: 66  FVLNTIINIGRSIPFIILLLILLPVTRFIVGTVLGTTAAIIPLSICAIPFVARLTANALM 125

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             PN   E A +   T W+  R   LP   P  + G           S ++     G + 
Sbjct: 126 EIPNGLTEAAQAMGATKWQIVRKFYLPEALPTLINGITLTLVTLVGYSAMAGTQGGGGLG 185

Query: 534 LRTTGLGAYIAESTEKGSFPEV-VLGVLIMCCFVLALNRF 572
                 G Y        + P V  +  +I+  FV+   + 
Sbjct: 186 SLAINYGVY-------RNMPYVTWVATIIIVLFVMISQKL 218


>gi|260654504|ref|ZP_05859994.1| phosphate ABC transporter, permease protein PstA [Jonquetella
           anthropi E3_33 E1]
 gi|260630781|gb|EEX48975.1| phosphate ABC transporter, permease protein PstA [Jonquetella
           anthropi E3_33 E1]
          Length = 284

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 5/183 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   +L +GI+  +L           + +    ++    +      T   ++ +M  +L 
Sbjct: 18  LTFILLAVGILAFILQRGWSALSWEFLTEKPRNSMTAGGILTPIVGTVELVVLSMAFALP 77

Query: 82  FTFVYATL---AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                       AK       L   +  +  +P + F  F +  F+ L       + L+A
Sbjct: 78  IGVATGLFFAEYAKPGPFVSALRTAIRCLAGVPSVVFGLFGLELFVIL--CHFGPSLLSA 135

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  S  Q+   +P+D    S +     W   W++  P S+P ++   ++
Sbjct: 136 SLTLACLSLPLLVTSSEQAFRAVPQDERLASYALGAGKWHTIWHVVFPSSVPSIITGAIL 195

Query: 199 SMS 201
           ++ 
Sbjct: 196 ALG 198



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV--VVLIIIASI 399
           + + + +  +  G+   I  +    +   F  +     +  G I    V  V L++++  
Sbjct: 14  WGIALTFILLAVGILAFILQRGWSALSWEFLTEKPRNSMTAGGILTPIVGTVELVVLSMA 73

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFPLVV-------SCVSYYHLNPNLW 451
             +P+G+  G      +K  PF   L  A       P VV         V   H  P+L 
Sbjct: 74  FALPIGVATGLFFAEYAKPGPFVSALRTAIRCLAGVPSVVFGLFGLELFVILCHFGPSLL 133

Query: 452 LSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            + L +      +L  +      A P D +  + +     W    +++ P   P  +TGA
Sbjct: 134 SASLTLACLSLPLLVTSSEQAFRAVPQDERLASYALGAGKWHTIWHVVFPSSVPSIITGA 193

Query: 511 ITACG 515
           I A G
Sbjct: 194 ILALG 198


>gi|258406150|ref|YP_003198892.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798377|gb|ACV69314.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 598

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/421 (11%), Positives = 120/421 (28%), Gaps = 25/421 (5%)

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             +A   +       M   +   + +IP+ L E + S  L+ +Q    + +P +   ++ 
Sbjct: 141 FWSATLGLAIYTSSFMAEVIRAGVQSIPKGLLEAAYSSGLTYFQALRTVILPLAFRAIIP 200

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            +             + ++ V +       I S      +      +LY  L++      
Sbjct: 201 PLGSEFLNNMKNSSLAMVVGVAELTWQSQQIESLTFRGFEATTGATVLYLGLSLAISGL- 259

Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK--TNFLRFIGYSSWNFFSPLSNN 312
                   + + + + R+E           +        T   +          +P +++
Sbjct: 260 --------LNMINTRLRIEDVHKKGGLTYHLTGALFWPFTQIWKLGILPVCKLCAPPADS 311

Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG------Y 366
           ++                       +    ++ ++    +    +   W  +        
Sbjct: 312 LRMSPGRRMWETAKKSLFQAMAWLAKGGFVLVFLYILYKIGQGLMSFHWDVVWENLDTLL 371

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-----RPHISSKIQPF 421
           I               G   +   +++ +IA  I   +G+ +G         +      +
Sbjct: 372 IWRFPQSGGGEENFMWGLGGLSFSILMAVIAISISFFIGLIVGLGRMSKNRILRLPCMVY 431

Query: 422 AQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
            +++   P      +    +      +LN     ++ +   T  YI   V  G    P  
Sbjct: 432 IEVIRGNPLIIVIFWVYFFLPIFIKTYLNVFWSATIALTIFTGAYIAEIVRGGIQNIPPG 491

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
             E A    +  W   R+I+LP      +   +      +  + ++ V     +     G
Sbjct: 492 QFEAAYGTGLGYWSTMRHIVLPQALKQMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQG 551

Query: 539 L 539
           L
Sbjct: 552 L 552


>gi|229163215|ref|ZP_04291170.1| ABC transporter permease protein [Bacillus cereus R309803]
 gi|228620278|gb|EEK77149.1| ABC transporter permease protein [Bacillus cereus R309803]
          Length = 288

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 70/186 (37%), Gaps = 7/186 (3%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + F +VI  I +     +  +           + +       A+ +   +  ++VI + F
Sbjct: 31  IWFSIVILFILLFQIFEKGISYLSIDFFTNFASRNPKEAGIAAALSGTILFMSIVIPVSF 90

Query: 83  TFVYATLA-----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F   T       AK      V+      +  +P + F    +  F+      +  + +A
Sbjct: 91  IFGVGTALYLEQYAKESIFKKVIEINNQTLAGVPSVVFGLLGLTIFVYAL--HLGESIVA 148

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  +  +  +++ ++P  L E S     + WQ  + + +P++ PG++    
Sbjct: 149 AALTMSLLVLPTVVVASQEAIRSVPSSLLEASYGLGATKWQTMYRVVLPYAFPGIITGCT 208

Query: 198 MSMSGG 203
           +++S  
Sbjct: 209 LAISRA 214



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 423 QLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480
           Q LA  P+ VF    L +   + +     +  +L M       ++        + P+   
Sbjct: 118 QTLAGVPSVVFGLLGLTIFVYALHLGESIVAAALTMSLLVLPTVVVASQEAIRSVPSSLL 177

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           E +     T W+    ++LP  FP  +TG   A   A
Sbjct: 178 EASYGLGATKWQTMYRVVLPYAFPGIITGCTLAISRA 214


>gi|120554206|ref|YP_958557.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
 gi|120324055|gb|ABM18370.1| phosphonate ABC transporter, inner membrane subunit [Marinobacter
           aquaeolei VT8]
          Length = 276

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 76/216 (35%), Gaps = 19/216 (8%)

Query: 50  DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----RRLGMVLVPILD 105
            + P   +V S       T    ++   I++  +   A LAA++      +  V   +L+
Sbjct: 70  SLPPDFTNVASWVSPLIDTLAMSIAGTAIAVTLSVPLAFLAARNTSPHPVVFQVTRTLLN 129

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
            ++S+P L      V          V+   L +I  +             +++ ++    
Sbjct: 130 GLRSVPELIMGIIFVAAVGFGALPGVLALGLHSIGMVGKF--------FAEAIEHVDEAP 181

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            E + +   +  Q  ++  +P ++P      +      +       M+  G       GI
Sbjct: 182 VEAADAAGATRLQVLYHAVLPQALPQFADVSIYRWEYNFRASTVMGMVGAG-------GI 234

Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
           G  +  +++      +   ++ +L ++ + D L  R
Sbjct: 235 GFELMGSLRIMQYQEVSAILIVILLMVTVVDSLSGR 270



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 30/271 (11%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AWQSIGYIVNH 370
           TL         +       +++   L +     V    +G+           +IG ++  
Sbjct: 10  TLSPAPSASVLDEHAKGWRKKLGQSLLVLLIIFVASWYVGLLNFNTLANGVPAIGTLIGE 69

Query: 371 FTYQDVLYVIWLG---CITMFRVVVLIIIASIIWIPVGIWIGFR----PHISSKIQPFAQ 423
               D   V         T+   +    IA  + +P+           P +    +    
Sbjct: 70  SLPPDFTNVASWVSPLIDTLAMSIAGTAIAVTLSVPLAFLAARNTSPHPVVFQVTRTLLN 129

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKE 481
            L + P  +   + V+ V +  L   L L L  + + G  +                  E
Sbjct: 130 GLRSVPELIMGIIFVAAVGFGALPGVLALGLHSIGMVGKFF------AEAIEHVDEAPVE 183

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541
            A +   T  +   + +LP   P +   +I      + AS V  +   G       G+G 
Sbjct: 184 AADAAGATRLQVLYHAVLPQALPQFADVSIYRWEYNFRASTVMGMVGAG-------GIGF 236

Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
            +  S     + EV   ++++   V  ++  
Sbjct: 237 ELMGSLRIMQYQEVSAILIVILLMVTVVDSL 267


>gi|90578974|ref|ZP_01234784.1| putative phosphate ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90439807|gb|EAS64988.1| putative phosphate ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 303

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 13/216 (6%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP---QYASRTTLR 71
            F N+F L A + ++ +I I     +E         +  I L    LP      +   + 
Sbjct: 28  FFKNLFMLSAAIGILSLITIGYFIFREGYAAFAQAGVAGIVLGTDWLPPALYGIAPMIVA 87

Query: 72  MLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
            L +   +++       L A        +RL  ++ P+++++  IP + +    L   V 
Sbjct: 88  SLVSTAGAVVLGVPIGVLTAIFIAEVAPKRLANLIRPMIELLAGIPSVVYGFFGLVIIVP 147

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               ++        LA I  +    +  +      S+  +PR  +E S +   S     +
Sbjct: 148 LIQEVFNVPAGNTILAGIIVLAVMILPTVITVSETSIRAVPRAYKEGSLALGASSMFTIF 207

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            L VP +  G++  +++ ++      +A  M++   
Sbjct: 208 KLLVPAARSGIMTGVILGVARALGETMAIIMVMGNS 243



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 11/228 (4%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-VIW 381
            R  F +N   L +   +  ++ I +F    G A        G ++        LY +  
Sbjct: 24  WREIFFKNLFMLSAAIGILSLITIGYFIFREGYAAFAQAGVAGIVLGTDWLPPALYGIAP 83

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVF------ 433
           +   ++      +++   I +   I+I       +++ I+P  +LLA  P+ V+      
Sbjct: 84  MIVASLVSTAGAVVLGVPIGVLTAIFIAEVAPKRLANLIRPMIELLAGIPSVVYGFFGLV 143

Query: 434 --FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              PL+    +    N  L   +++       ++        A P  +KE + +   +  
Sbjct: 144 IIVPLIQEVFNVPAGNTILAGIIVLAVMILPTVITVSETSIRAVPRAYKEGSLALGASSM 203

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
                +++P      +TG I     A   ++   +       +    L
Sbjct: 204 FTIFKLLVPAARSGIMTGVILGVARALGETMAIIMVMGNSPAMPDGLL 251


>gi|83955248|ref|ZP_00963903.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
 gi|83840241|gb|EAP79415.1| ABC D-methionine uptake transporter, inner membrane subunit
           [Sulfitobacter sp. NAS-14.1]
          Length = 224

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP--------ILDIMQSIPI 112
           L +   +T   +  + ++  L         A S+R  ++  P        +++  +S+P 
Sbjct: 9   LIEATGQTLYMVAISALLGTLLGLPLGLFLATSQRGELLSAPWVNKVLGLVVNATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  +  G  IG   AAI  +  + V  +   +  ++  +   L E +R+ 
Sbjct: 68  FIILVVAIIPFTRMVAGTSIGTT-AAIVPLTIATVPFIARLVENAIREVDSGLIEAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P ++PG+   + +++
Sbjct: 127 GATPLQIIRKVLLPEALPGITLGLTLAI 154



 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 4/121 (3%)

Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNV 468
           P ++  +        + P  +   + +   +      ++  +  ++     T  +I   V
Sbjct: 50  PWVNKVLGLVVNATRSVPFIILV-VAIIPFTRMVAGTSIGTTAAIVPLTIATVPFIARLV 108

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
                   +   E A +   T  +  R ++LP   P    G   A       S +     
Sbjct: 109 ENAIREVDSGLIEAARAMGATPLQIIRKVLLPEALPGITLGLTLAIVSLIGYSAMVGAVG 168

Query: 529 W 529
            
Sbjct: 169 G 169


>gi|319941526|ref|ZP_08015853.1| phosphate ABC transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319805000|gb|EFW01839.1| phosphate ABC transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 295

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 73  LSAMVISLLFTFVYATL------AAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
           L+   ++ L    +  L      A     L  ++ P++++M ++P +      +     +
Sbjct: 76  LACAALTTLIAVPFGVLTACAIHAGMPPALTRIVKPLIELMAALPSVVIGFIGMIILAPW 135

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             +++          A   +    V  +      +L N+P  L E S +   + W+    
Sbjct: 136 LQDMFGIATGLNLFNASIMLAFMCVPTIASISEDALRNVPSGLREASLALGATRWETLLK 195

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----------LPGIGSYIALA 232
           + + ++M G+   +M+ +S      +   M+  G  +IP             I + +A A
Sbjct: 196 VELRWAMGGIATAVMLGISRVIGETMVVLMVAGGAAIIPESIFDPVRPMTSSIAAEMAEA 255

Query: 233 IKEQDLLAILYAMLTMLGVI 252
               +    LYA   +L +I
Sbjct: 256 AVGGEHYHALYATGLVLFII 275



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 87/284 (30%), Gaps = 30/284 (10%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388
              L   +   V  +  I  F +   + I        ++ +   Y      ++     + 
Sbjct: 14  RRGLAAAAGVSVLALAAIVIFLLSQALPIFAHVSLKDFLFSTEWYPTDDPPVFGIGALIA 73

Query: 389 RVVVLIIIASIIWIPVGIW------IGFRPHISSKIQPFAQLLAAFPA--------NVFF 434
             +    + ++I +P G+        G  P ++  ++P  +L+AA P+         +  
Sbjct: 74  GSLACAALTTLIAVPFGVLTACAIHAGMPPALTRIVKPLIELMAALPSVVIGFIGMIILA 133

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           P +               S+++ F     I           P+  +E + +   T W   
Sbjct: 134 PWLQDMFGIATGLNLFNASIMLAFMCVPTIASISEDALRNVPSGLREASLALGATRWETL 193

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR----------TTGLGAYIA 544
             + L        T  +         ++V  + + G   +           T+ + A +A
Sbjct: 194 LKVELRWAMGGIATAVMLGISRVIGETMVVLMVAGGAAIIPESIFDPVRPMTSSIAAEMA 253

Query: 545 ESTEKG-SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
           E+   G  +  +    L++     A N   W     Y  R   L
Sbjct: 254 EAAVGGEHYHALYATGLVLFIITFAFNLCAW-----YAARRFGL 292


>gi|257469498|ref|ZP_05633590.1| binding-protein-dependent transport systems inner membrane
           component [Fusobacterium ulcerans ATCC 49185]
 gi|317063742|ref|ZP_07928227.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689418|gb|EFS26253.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
          Length = 251

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 10/185 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           T+ R  + I I+ +I I   I             PF   L + P      LV+       
Sbjct: 61  TLKRTGISIGISLVIGILCSILSYRYKFFYILFFPFFSFLKSIPTIAVIILVLIW----- 115

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N      +  I      I  N++ G  +   D  ++A  + ++     + I +PG++ +
Sbjct: 116 SNVEAVPIITGIMILLPLIYENILGGIDSIDRDLLKMADIYKVSKIDILKGIYIPGVYYF 175

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
             +G            I  EV S G +      +G  I           +   ++I+   
Sbjct: 176 SSSGIPALIALTLKVVIAGEVLSQGSLS-----IGGEIFMGKIYLESSSIFAWIIIVILI 230

Query: 566 VLALN 570
              L+
Sbjct: 231 NFLLD 235



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L F++V  I++ ++           I   +   +           T  R   ++ ISL+ 
Sbjct: 16  LLFIIVWEIVSRIVGNDLIFPGIPSIFKALIDIIKGKDFLSIVFHTLKRTGISIGISLVI 75

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
             + + L+ + +   ++  P    ++SIP +  +   +++            E   I   
Sbjct: 76  GILCSILSYRYKFFYILFFPFFSFLKSIPTIAVIILVLIW---------SNVEAVPIITG 126

Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202
               +  +  ++   + +I RDL +++  +++S       + +P         +   ++ 
Sbjct: 127 IMILLPLIYENILGGIDSIDRDLLKMADIYKVSKIDILKGIYIPGVYYFSSSGIPALIAL 186

Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256
               V+A E++  G        IG  I +     +  +I   ++ ++ + FL D
Sbjct: 187 TLKVVIAGEVLSQGSLS-----IGGEIFMGKIYLESSSIFAWIIIVILINFLLD 235


>gi|329964415|ref|ZP_08301496.1| ABC transporter, permease protein [Bacteroides fluxus YIT 12057]
 gi|328525464|gb|EGF52512.1| ABC transporter, permease protein [Bacteroides fluxus YIT 12057]
          Length = 257

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 88/244 (36%), Gaps = 21/244 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L   +++ ++ I+L+   +      + +     +   +L      +    +   +  LL
Sbjct: 13  FLLVFVIVPLLLIVLYAFTDAEGAFTLANFRKFMMHPEAL-NTFVYSIGIAVITTLACLL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL----- 136
             +  A + ++ +          +  +++ +L  L   V   +       +   L     
Sbjct: 72  LGYPAAYILSQKQ---------FNTSRTMVVLFILPMWVNILIRTLATVALFDFLNLPLG 122

Query: 137 --AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A +F +  + +  M + +Y +L  +  +L E ++    S  + F  + +P SMPG++ 
Sbjct: 123 EGALVFGMVYNFLPFMIYPIYNTLQKMDHNLIEAAQDLGASPVKVFGKVILPLSMPGIMS 182

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            ++M           +E++ + +  +     G+ +   I            L ML +I +
Sbjct: 183 GIVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENIYNGMWNYGAALSLIMLLLIGI 238

Query: 255 YDQL 258
               
Sbjct: 239 TILF 242



 Score = 37.2 bits (85), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 6/147 (4%)

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
           L+        F  +   +    L   +  + L       Y ++N +       ++  E A
Sbjct: 104 LIRTLATVALFDFLNLPLGEGALVFGMVYNFLPFMI---YPIYNTL---QKMDHNLIEAA 157

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
                +  + +  +ILP   P  ++G +       +   ++E+ +  +I L  T +   I
Sbjct: 158 QDLGASPVKVFGKVILPLSMPGIMSGIVMVFMPTVSTFAIAELLTMNNIKLFGTTVQENI 217

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570
                       ++ +L++   +L  N
Sbjct: 218 YNGMWNYGAALSLIMLLLIGITILFTN 244


>gi|325263672|ref|ZP_08130406.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           D5]
 gi|324031381|gb|EGB92662.1| phosphate ABC transporter, permease protein PstA [Clostridium sp.
           D5]
          Length = 286

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 72/188 (38%), Gaps = 12/188 (6%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           LL  ++   ++  L+  I    VP   +     +    S         +  ++  ++SL+
Sbjct: 28  LLGAIITFAVLIFLIIYILVHGVPY--IKPSLFSFTYTSDNASLMPALVNTVTMTLLSLV 85

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                   AA        +  +   ++    + +  IP + +  F +++F+N        
Sbjct: 86  VAVPLGIFAAIFLVEYAKRGNKFMGIIRLTTETLSGIPSIVYGLFGMLFFVNTLGWGF-- 143

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + LA  F +    +  +  +  ++L  +P    E S        +  + + +P ++PG++
Sbjct: 144 SLLAGAFTLAIMILPLIMRTTEEALKAVPDTFREGSFGLGAGKLRTVFRIVLPSAIPGIL 203

Query: 194 WNMMMSMS 201
             +++++ 
Sbjct: 204 AGIILAIG 211



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 17/247 (6%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  I  F V+  + I I    + YI                   +   V + +++ ++ +
Sbjct: 29  LGAIITFAVLIFLIIYILVHGVPYIKPSLFSFTYTSDNASLMPALVNTVTMTLLSLVVAV 88

Query: 403 PVGIWIG--------FRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWL 452
           P+GI+                  I+   + L+  P+ V+  F ++    +       L  
Sbjct: 89  PLGIFAAIFLVEYAKRGNKFMGIIRLTTETLSGIPSIVYGLFGMLFFVNTLGWGFSLLAG 148

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +  +       I+        A P+ F+E +        R    I+LP   P  + G I 
Sbjct: 149 AFTLAIMILPLIMRTTEEALKAVPDTFREGSFGLGAGKLRTVFRIVLPSAIPGILAGIIL 208

Query: 513 ACGGAWN--ASIVSEVASWGHIHLRTTGLGAYIAE-----STEKGSFPEVVLGVLIMCCF 565
           A G      A+++    +  +I     G G  +A      ++E     +     +I+   
Sbjct: 209 AIGRIVGETAALMYTAGTVANIPSSVMGSGRTLAVHMYNLASEGLYMDQAYATAVILLIL 268

Query: 566 VLALNRF 572
           V+ +N  
Sbjct: 269 VVGINAL 275


>gi|256829627|ref|YP_003158355.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
 gi|256578803|gb|ACU89939.1| binding-protein-dependent transport systems inner membrane
           component [Desulfomicrobium baculatum DSM 4028]
          Length = 283

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 61/145 (42%), Gaps = 5/145 (3%)

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             +   +   P  ++    A +  +  + +  M   +Y +L  + R   E +R    S W
Sbjct: 133 VLLTLGIIDSPLAMMYTPGAVVLGLVYTLLPFMILPLYAALERLDRRYLEAARDLGASPW 192

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQ 236
           + FW + VP +MPG+V   M+    G      S+++     ++    +G++I    +  +
Sbjct: 193 RAFWKVVVPLTMPGIVSGCMLVFLPGIGMFYVSDVLGGAKAML----LGNFIRDQFLTTR 248

Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261
           D      A +T+  ++ +   L ++
Sbjct: 249 DWPLGAAASVTLTVLMGVMLLLYWK 273



 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++  + A        + E A     + WR +  +++P   P  V+G +           V
Sbjct: 165 MILPLYAALERLDRRYLEAARDLGASPWRAFWKVVVPLTMPGIVSGCMLVFLPGIGMFYV 224

Query: 524 SEVASWGHIHLRTTGLGAYI-AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582
           S+V       L    LG +I  +      +P      + +   +  +    W      G 
Sbjct: 225 SDVLGGAKAML----LGNFIRDQFLTTRDWPLGAAASVTLTVLMGVMLLLYWKSAARLGR 280

Query: 583 R 583
           +
Sbjct: 281 K 281


>gi|227552021|ref|ZP_03982070.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257879887|ref|ZP_05659540.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257884045|ref|ZP_05663698.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|257886817|ref|ZP_05666470.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
 gi|257895386|ref|ZP_05675039.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
 gi|257897997|ref|ZP_05677650.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
 gi|258616650|ref|ZP_05714420.1| phosphate ABC transporter, permease protein [Enterococcus faecium
           DO]
 gi|293378255|ref|ZP_06624424.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium PC4.1]
 gi|293572401|ref|ZP_06683381.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E980]
 gi|227178774|gb|EEI59746.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257814115|gb|EEV42873.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,230,933]
 gi|257819883|gb|EEV47031.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,501]
 gi|257822871|gb|EEV49803.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,141,733]
 gi|257831951|gb|EEV58372.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com12]
 gi|257835909|gb|EEV60983.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium Com15]
 gi|291607463|gb|EFF36805.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E980]
 gi|292643119|gb|EFF61260.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium PC4.1]
          Length = 294

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 4/154 (2%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            + M+ +  ISL      +  A K+  L  V+   ++I+ S+P +    F  + F+  + 
Sbjct: 70  LITMIISFPISLGAGIYLSEYAGKN-WLTDVIRTSIEILSSLPSVVVGLFGFLVFVIQFQ 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A    +F   +  +T ++ +SL  +     E   +  LS W+    + VP +
Sbjct: 129 YGFSIISGALALTVFNLPL--LTRTVEESLQAVHYTQREAGLALGLSRWETVIKVVVPEA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            PG++  +++S SG  F   A+ +   G +   L
Sbjct: 187 TPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFP 429
           YQ+   +      +++ +++ +II+  I +  GI++        ++  I+   ++L++ P
Sbjct: 52  YQEGGGIGIQLFNSIYLLLITMIISFPISLGAGIYLSEYAGKNWLTDVIRTSIEILSSLP 111

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEV 482
           +     +VV    +            +I G     +FN+                  +E 
Sbjct: 112 S-----VVVGLFGFLVFVIQFQYGFSIISGALALTVFNLPLLTRTVEESLQAVHYTQREA 166

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             +  ++ W     +++P   P  +TG I + G  + 
Sbjct: 167 GLALGLSRWETVIKVVVPEATPGILTGVILSSGRIFG 203


>gi|225156504|ref|ZP_03724839.1| phosphate ABC transporter, inner membrane subunit PstA [Opitutaceae
           bacterium TAV2]
 gi|224802933|gb|EEG21180.1| phosphate ABC transporter, inner membrane subunit PstA [Opitutaceae
           bacterium TAV2]
          Length = 358

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T L  + +M I+L+     A      A+  R    +   +  +  +P + F  F    F+
Sbjct: 133 TLLLTVGSMTIALILGVCSAIYLSEYARDGRFVRFIRLAILNLAGVPSIVFGLFGFGLFV 192

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +   V  + LA  F +    +  +  +  ++L  +PR   E + +   + WQ      
Sbjct: 193 IFFGWNV--SLLAGWFTLAFMVLPVVITASEEALKAVPRGFREGALALGATKWQAIRTNV 250

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P+++PG++ + ++ ++
Sbjct: 251 LPYALPGILTSSILGIA 267



 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF----FPLVV 438
           T+   V  + IA I+ +   I++            I+     LA  P+ VF    F L V
Sbjct: 133 TLLLTVGSMTIALILGVCSAIYLSEYARDGRFVRFIRLAILNLAGVPSIVFGLFGFGLFV 192

Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
               +       W +L  +      ++        A P  F+E A +   T W+  R  +
Sbjct: 193 IFFGWNVSLLAGWFTLAFMVLPV--VITASEEALKAVPRGFREGALALGATKWQAIRTNV 250

Query: 499 LPGIFPYYVTGAITAC 514
           LP   P  +T +I   
Sbjct: 251 LPYALPGILTSSILGI 266


>gi|118472530|ref|YP_890549.1| amino acid ABC transporter permease [Mycobacterium smegmatis str.
           MC2 155]
 gi|118173817|gb|ABK74713.1| amino acid ABC transporter, permease protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 214

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 74/199 (37%), Gaps = 12/199 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L +         L  +V+ LL       L  ++  L  +      I+ +IP L       
Sbjct: 11  LWELTVIHLRLSLVPIVLGLLIAVPLGALVQRTTTLRRLTTVAASIIFTIPSLALFVA-- 68

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
              + L     I  E   I A+       +  ++ ++L  +P  + + + +       + 
Sbjct: 69  ---LPLIIPTRILDEANVIVALTLYTTALLVRAVPEALDAVPEHVRDAATAVGYRPLTRM 125

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P S+P LV ++ +        V    M+ VG  VI + G+G++     +      
Sbjct: 126 LKVELPLSIPVLVASLRV------VAVTNISMVSVGS-VIGIGGLGTWFTEGYQSNKSSQ 178

Query: 241 ILYAMLTMLGVIFLYDQLL 259
           I+  ++ +  +  + D L+
Sbjct: 179 IIAGIIAIFVLAIVVDTLI 197



 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 8/192 (4%)

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
           L  I +   +V I++  +I +P+G  +     +       A ++   P+   F + +  +
Sbjct: 14  LTVIHLRLSLVPIVLGLLIAVPLGALVQRTTTLRRLTTVAASIIFTIPSLALF-VALPLI 72

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
               +     + + +   T   ++  V     A P   ++ A++           + LP 
Sbjct: 73  IPTRILDEANVIVALTLYTTALLVRAVPEALDAVPEHVRDAATAVGYRPLTRMLKVELPL 132

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  V           +   V  V   G       GLG +  E  +     +++ G++ 
Sbjct: 133 SIPVLVASLRVVAVTNISMVSVGSVIGIG-------GLGTWFTEGYQSNKSSQIIAGIIA 185

Query: 562 MCCFVLALNRFL 573
           +    + ++  +
Sbjct: 186 IFVLAIVVDTLI 197


>gi|332878634|ref|ZP_08446353.1| molybdate ABC transporter, permease protein [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332683409|gb|EGJ56287.1| molybdate ABC transporter, permease protein [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 224

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 61/156 (39%), Gaps = 21/156 (13%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
            +    T    +    I  +F+   +   A S+  G VL    + +  +P++  L  TV+
Sbjct: 5   IKTLLLTGKMAVITTAILFIFSLPVSYWLAYSKFKGKVL---FEALLCMPMV--LPPTVL 59

Query: 122 ---YFMNLYPGKVIGAELAAIFAI-------------FTSQVWNMTFSMYQSLCNIPRDL 165
              + + + P + +G  L+  F I               + +  M   +      +P+ L
Sbjct: 60  GYYFLLLISPTRGLGKYLSETFEIQLAFTFEGVVMASIVANLPFMIQPLQNGFTALPKQL 119

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           +E + +   S W  FW + +P   P ++  + ++ +
Sbjct: 120 KEAAYTLGKSKWTTFWRVLLPNIKPSIITGLALTFA 155



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           G +A P   KE A +   + W  +  ++LP I P  +TG    
Sbjct: 111 GFTALPKQLKEAAYTLGKSKWTTFWRVLLPNIKPSIITGLALT 153


>gi|308185431|ref|YP_003929563.1| ABC transporter, permease protein [Pantoea vagans C9-1]
 gi|308055711|gb|ADO07881.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 216

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD--------IMQSIPI 112
           L      T L +  +  ++L      A +   S R  +   P+L+        + +SIP 
Sbjct: 8   LWVAFLDTLLMVGVSSALALALGLPMAVILVVSGRGDLFPSPLLNRVLGWVVNLFRSIPF 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F     G   GA  AA+  +  +           SL  + + L E +++ 
Sbjct: 68  LILM-VALIPFTRWIVGTTYGA-WAAVVPLTLAATPFFARIAEVSLREVDKGLTEAAQAM 125

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P + PG+V    +++
Sbjct: 126 GFHRWHIIWHVLLPEARPGIVSGFTITL 153



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 14/141 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPAN----VF 433
           T+  V V   +A  + +P+ + +           P ++  +     L  + P        
Sbjct: 15  TLLMVGVSSALALALGLPMAVILVVSGRGDLFPSPLLNRVLGWVVNLFRSIPFLILMVAL 74

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P     +          +  L +  T ++                 E A +     W  
Sbjct: 75  IPF-TRWIVGTTYGAWAAVVPLTLAATPFFARI-AEVSLREVDKGLTEAAQAMGFHRWHI 132

Query: 494 WRYIILPGIFPYYVTGAITAC 514
             +++LP   P  V+G     
Sbjct: 133 IWHVLLPEARPGIVSGFTITL 153


>gi|225575562|ref|ZP_03784172.1| hypothetical protein RUMHYD_03654 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037228|gb|EEG47474.1| hypothetical protein RUMHYD_03654 [Blautia hydrogenotrophica DSM
           10507]
          Length = 288

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 68/182 (37%), Gaps = 4/182 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVP--RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79
           L+ F ++I ++  +L        P    +         + +L      T L +L A+ I 
Sbjct: 34  LITFCVLIFLVAFILVKGIRYLTPDLFALKYTTENASLMPALVNTLIITALSLLIAVPIG 93

Query: 80  LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
           +         A +  RL  ++    + +  IP + +  F +++F             +  
Sbjct: 94  VFAAIFLVEYANRGSRLVSLIRITTETLSGIPSIIYGLFGLLFFTTALKWGFSLLSGSLT 153

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             I    +  +  +  ++L ++P    E S        +  + + +P ++PG++  ++++
Sbjct: 154 LVIMILPL--VIRTTEEALKSVPDFYREASFGLGAGKLRTIFKVVLPSAVPGILAGVILA 211

Query: 200 MS 201
             
Sbjct: 212 TG 213



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 10/209 (4%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +  +  FCV+  +   I  + I Y+                   +   +++  ++ +I +
Sbjct: 31  LAALITFCVLIFLVAFILVKGIRYLTPDLFALKYTTENASLMPALVNTLIITALSLLIAV 90

Query: 403 PVGIWIG--------FRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWL 452
           P+G++              + S I+   + L+  P+ ++  F L+    +       L  
Sbjct: 91  PIGVFAAIFLVEYANRGSRLVSLIRITTETLSGIPSIIYGLFGLLFFTTALKWGFSLLSG 150

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           SL ++      ++        + P+ ++E +        R    ++LP   P  + G I 
Sbjct: 151 SLTLVIMILPLVIRTTEEALKSVPDFYREASFGLGAGKLRTIFKVVLPSAVPGILAGVIL 210

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGA 541
           A G     +      +     +    LG+
Sbjct: 211 ATGRIVGETAALIYTAGTVAQIPGNLLGS 239


>gi|83591939|ref|YP_425691.1| phosphate ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83574853|gb|ABC21404.1| Phosphate transport system permease protein 2 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 426

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  +      +   +L  + +S       A      A       ++   ++ + ++P +
Sbjct: 200 ELAGIWGGVVGSVYVLLVTLALSFPIGVATAIYLEEYAPRNWFTDLIEVNINNLAAVPSI 259

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N++ G    A +     +    +  +  +   +L ++P  + E +    
Sbjct: 260 VFGLLGLAVFLNVF-GMPRSAPVVGGLVLTLMTLPTIIIASRAALTSVPPSIREAALGVG 318

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S  Q   +  +P +MPG++   ++ M+  
Sbjct: 319 ASKMQMVTHHVLPLAMPGMLTGTIIGMAQA 348



 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 6/161 (3%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPA 430
            ++  +      +++ ++V + ++  I +   I++     R   +  I+     LAA P+
Sbjct: 199 PELAGIWGGVVGSVYVLLVTLALSFPIGVATAIYLEEYAPRNWFTDLIEVNINNLAAVPS 258

Query: 431 NVFFPLVVSCVSYYHLNPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            VF  L ++        P        L++   T   I+    A  ++ P   +E A    
Sbjct: 259 IVFGLLGLAVFLNVFGMPRSAPVVGGLVLTLMTLPTIIIASRAALTSVPPSIREAALGVG 318

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            +  +   + +LP   P  +TG I     A   +    +  
Sbjct: 319 ASKMQMVTHHVLPLAMPGMLTGTIIGMAQALGETAPLLMIG 359


>gi|46579164|ref|YP_009972.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46448577|gb|AAS95231.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233002|gb|ADP85856.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 596

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 62/501 (12%), Positives = 156/501 (31%), Gaps = 39/501 (7%)

Query: 73  LSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131
           L +  ++L    V      +    L +    +++  ++ P+L  L F    F  + P  +
Sbjct: 69  LISSALALGLGTVLGIARLSLFAPLRLTATAVVEFFRNTPLLVQLFFWYFAFPAILPENI 128

Query: 132 IGAELAAIFAIFTSQVWN-------MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   F  + + +         M   +   L +IP+ L E + S  L+  Q    + 
Sbjct: 129 RELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTII 188

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLL-AI 241
           +P +   ++  +             SE +  +   ++  + G+      + + + L    
Sbjct: 189 LPMAFRAIIPPL------------GSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFKG 236

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI-GY 300
             A      +      L+   +   + K RL+       +  +V  +    + +R +   
Sbjct: 237 FEATSAATVLYLSLSLLISFILNGVNGKMRLDTAPKRSLSVMFVDAVLLPVSLIRRVFVR 296

Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360
                             +  +             ++        +    ++   A G+ 
Sbjct: 297 PIGRALRRRRRAATSATYSPAMATMRVAMQMAGKGASLLCKGAFILALGGLLFVTARGLY 356

Query: 361 WQSIGYIVNHFTYQDVLYV-------IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413
             + G I ++     + +        +++G   +   +++ +IA  +   +G+ +G    
Sbjct: 357 NFNWGVIADNLRTLLIWHFPNGQSDELFMGLGGLAYSLLMAVIAISVSFFIGLVVGIGRT 416

Query: 414 ISSKIQPF-----AQLLAAFP---ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465
             ++I         +L+   P      +    +  +     N     ++ +   T  Y+ 
Sbjct: 417 SDNRICRIPCLLYIELIRGNPLIIVIFWIYFFIPVLFNTFFNVFWSATIALTLFTGAYLA 476

Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525
             V AG    P    E A S  +T  +  R IILP      +   +      +  + ++ 
Sbjct: 477 EIVRAGIQNIPAGQVEAAYSTGLTFVQTMRRIILPQALKQMIPAIVGQFIAIFKDTSLAF 536

Query: 526 VASWGHIHLRTTGLGAYIAES 546
           V     +     G+   +   
Sbjct: 537 VLGVLELTFVAQGINNRLMVY 557


>gi|262372327|ref|ZP_06065606.1| D-methionine transport system permease metI [Acinetobacter junii
           SH205]
 gi|262312352|gb|EEY93437.1| D-methionine transport system permease metI [Acinetobacter junii
           SH205]
          Length = 219

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 70  LRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFTVV 121
           + +  + +++ L     A +           S+++   L  +++I +S+P L  +   ++
Sbjct: 18  IMVGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWVINITRSVPFLILM-VALI 76

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F     G   G  LAAI  +  + +         SL  + + L E +++   +  Q  W
Sbjct: 77  PFTRWIVGTSYGV-LAAIVPLIIAAIPFFARIAEVSLREVDQGLIEAAQAMGCNRKQILW 135

Query: 182 YLGVPFSMPGLVWNMMMSM 200
           ++ +P ++PG++    +++
Sbjct: 136 HVLLPEALPGIIAGFTVTI 154



 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 14/137 (10%)

Query: 390 VVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPAN----VFFPLV 437
           V V  I+A +I +P+ + +             I+  +     +  + P         P  
Sbjct: 20  VGVSAILAFLIGLPIALILVSTADFGIYPSKKINQSLGWVINITRSVPFLILMVALIPFT 79

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497
              V   +      + L++     +  +               E A +      +   ++
Sbjct: 80  RWIVGTSYGVLAAIVPLIIAAIPFFARI--AEVSLREVDQGLIEAAQAMGCNRKQILWHV 137

Query: 498 ILPGIFPYYVTGAITAC 514
           +LP   P  + G     
Sbjct: 138 LLPEALPGIIAGFTVTI 154


>gi|167738553|ref|ZP_02411327.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
          Length = 226

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 9/201 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A R    +  ++  ++           +S  L   L+P+L+++Q+IP +      +    
Sbjct: 19  AIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLA 78

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A L         A+ A+F   +  +  S+      +P  + E + +  ++G
Sbjct: 79  ILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTG 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++   + +P ++P ++  + + +        VA+ +   G       GIG      +  
Sbjct: 139 RERLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLL 198

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
             L  I  A++T +      D
Sbjct: 199 GALPTIALALVTAVLFEAATD 219



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V   +  A  + +P+GI       +   + P   ++   P+   + L+++ ++    
Sbjct: 23  LALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLAILAA 82

Query: 447 NPNL------------WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
              L               + +       I+ +V+ G +  P    E A +  +TG    
Sbjct: 83  RVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRERL 142

Query: 495 RYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I LP   P  ++G           + + + +   G       G+G    +    G+ P
Sbjct: 143 VAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALP 202

Query: 554 EVVLGVLIMCCFVLALN 570
            + L ++    F  A +
Sbjct: 203 TIALALVTAVLFEAATD 219


>gi|77918270|ref|YP_356085.1| phosphate ABC transporter permease [Pelobacter carbinolicus DSM
           2380]
 gi|77544353|gb|ABA87915.1| ABC-type phosphate transport system, permease component [Pelobacter
           carbinolicus DSM 2380]
          Length = 742

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 6/150 (4%)

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +  F            +   FA+  + +  +      +L N+P  L+  S +   S W
Sbjct: 576 FKLWLFSETGIRYDTRNNIIIAFALGFAVIPIIFTMAEDALSNVPGSLKAASLALGASRW 635

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIAL 231
           Q  W + +P   PG+    M+         +   M      ++       +  + S IA+
Sbjct: 636 QTVWRVILPSGSPGIFAGTMIGFGRAIGETMIVLMATGNTAIMDWSIFNGMRPLSSNIAV 695

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            I E  +   LY +L +  VI      +  
Sbjct: 696 EIPEAPVGGTLYRVLFLSAVILFVMTFILN 725



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 32/94 (34%)

Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
             Y    N+ ++  + F     I        S  P   K  + +   + W+    +ILP 
Sbjct: 586 IRYDTRNNIIIAFALGFAVIPIIFTMAEDALSNVPGSLKAASLALGASRWQTVWRVILPS 645

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
             P    G +   G A   +++  +A+     + 
Sbjct: 646 GSPGIFAGTMIGFGRAIGETMIVLMATGNTAIMD 679


>gi|84501124|ref|ZP_00999359.1| phosphate ABC transporter, permease protein [Oceanicola batsensis
           HTCC2597]
 gi|84391191|gb|EAQ03609.1| phosphate ABC transporter, permease protein [Oceanicola batsensis
           HTCC2597]
          Length = 446

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 56/140 (40%), Gaps = 6/140 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           +   ML  + +SL      +      A ++R   M+ V I + + ++P + F    +  F
Sbjct: 226 SFFMMLVVLFLSLPIGVAASIYLEEFAPQNRWTDMIEVNISN-LAAVPSIVFGILGLAVF 284

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
           +  +      A L     +    +  +  S   SL  +P  + + +     S  Q  ++ 
Sbjct: 285 IQ-FMHLPQSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQAVFHH 343

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P +MPG++   ++ ++  
Sbjct: 344 VLPLAMPGILTGTIIGLAQA 363



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 6/228 (2%)

Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355
            F   +      P+S  +    R  G  +       LQ     ++S +  +        +
Sbjct: 136 EFYRANPAQLGEPVSFQLSASSRVDGYFKGRVTREALQDSRFLQLSDLDLVDALEEAGII 195

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRP 412
                W  I    +         +      + F ++V++ ++  I +   I++     + 
Sbjct: 196 RQSFNWTFIQGADSGVDNPGGAGIGASVVGSFFMMLVVLFLSLPIGVAASIYLEEFAPQN 255

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN---LWLSLLMIFGTQWYILFNVI 469
             +  I+     LAA P+ VF  L ++    +   P    L   L++   T   I+ +  
Sbjct: 256 RWTDMIEVNISNLAAVPSIVFGILGLAVFIQFMHLPQSAPLVGGLVLTLMTLPTIIISTR 315

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           A   A P   ++ A     +  +   + +LP   P  +TG I     A
Sbjct: 316 ASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAMPGILTGTIIGLAQA 363


>gi|330806936|ref|YP_004351398.1| D-methionine ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375044|gb|AEA66394.1| Putative D-methionine ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 214

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L Q    T L +  + +I+LL     A +   S          L   L   +++ +SIP 
Sbjct: 6   LLQGFIDTFLMVGVSSLIALLAGIPLAVILVTSGKGGIYEAPVLNRALGAFVNLFRSIPF 65

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
           L  +   ++ F  L  G   G   AA+  +  +           SL  +   L E +++ 
Sbjct: 66  LILM-VALIPFTRLIVGTTYGV-WAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAM 123

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
               W   W++ +P ++PG+V    +++
Sbjct: 124 GCRRWHIVWHVLLPEALPGIVGGFTITL 151



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 10/191 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFF-PL 436
           T   V V  +IA +  IP+ + +           P ++  +  F  L  + P  +    L
Sbjct: 13  TFLMVGVSSLIALLAGIPLAVILVTSGKGGIYEAPVLNRALGAFVNLFRSIPFLILMVAL 72

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWR 495
           +            +W +++ +          +         +   E A +     W    
Sbjct: 73  IPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIVW 132

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
           +++LP   P  V G         N+S ++     G +       G    +S    +   +
Sbjct: 133 HVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDSQIMLTVIVL 192

Query: 556 VLGVLIMCCFV 566
           ++ ++ +    
Sbjct: 193 LVALVAVIQLG 203


>gi|306834286|ref|ZP_07467403.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus bovis ATCC 700338]
 gi|304423459|gb|EFM26608.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus bovis ATCC 700338]
          Length = 283

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 14/163 (8%)

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRS 171
           F+  T + F       V+G     +  IF      +  S +        IP++LEE +  
Sbjct: 122 FIPATAMTFPVYRLVNVLGIYNTPVALIFVYSCSGIAMSFFIIKNYFAIIPKELEEAAEI 181

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG-IGSYIA 230
              S  Q FW + +P + PG++   +++    W     + M+++    + +P  +G +  
Sbjct: 182 DGASYAQTFWKVMLPIARPGILTAAILAFINNWNEYYWASMLIINKDELTVPALLGQFTT 241

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273
                 +       + + + VI L   LLF     +++K+ +E
Sbjct: 242 SFNTNYN------GLFSAIVVIILPPILLF----AFASKYFIE 274



 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 428 FPANVF-FPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFPNDFKEVA 483
            PA    FP+          N  + L  +         ++I+ N  A     P + +E A
Sbjct: 123 IPATAMTFPVYRLVNVLGIYNTPVALIFVYSCSGIAMSFFIIKNYFA---IIPKELEEAA 179

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAY 542
                +  + +  ++LP   P  +T AI A    WN    + +       L     LG +
Sbjct: 180 EIDGASYAQTFWKVMLPIARPGILTAAILAFINNWNEYYWASMLIINKDELTVPALLGQF 239

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLAL 569
                   ++  +   ++++    + L
Sbjct: 240 TTSF--NTNYNGLFSAIVVIILPPILL 264


>gi|253577314|ref|ZP_04854632.1| phosphate ABC transporter, permease PstA [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843318|gb|EES71348.1| phosphate ABC transporter, permease PstA [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 295

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 78/203 (38%), Gaps = 6/203 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  +++ G++  +L           +            +      +   ++  M+I++  
Sbjct: 20  LIVLIMAGLLGFILVRGLGHISFDFLTSPPETIKAGGGIGPQLFNSLFLLVLTMIITIPL 79

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
                      AK  ++   +  I++++ S P +    F ++  +NL+         A  
Sbjct: 80  GIGAGVYMSEYAKPGKITDFIRLIVEVLSSFPSIVVGLFGLLVIVNLFGFGFSLFSGALA 139

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             IF   +  M     Q L ++P+  +E S +  LS W+    + +P +MP ++   +++
Sbjct: 140 LTIFNLPL--MVRITEQGLASVPQAQKEASLALGLSKWKTIQSVMLPIAMPVILTGTILA 197

Query: 200 MSGGWFFVVASEMIVVGDTVIPL 222
            +G  F   A+ +   G +   L
Sbjct: 198 -AGRVFGEAAALLFTAGMSSPRL 219



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 21/196 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIA 397
           V   L      ++ G+   I  + +G+I   F       +   G I   +F  + L+++ 
Sbjct: 13  VIITLAGLIVLIMAGLLGFILVRGLGHISFDFLTSPPETIKAGGGIGPQLFNSLFLLVLT 72

Query: 398 SIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            II IP+GI  G           I+  I+   ++L++FP+     +VV       +    
Sbjct: 73  MIITIPLGIGAGVYMSEYAKPGKITDFIRLIVEVLSSFPS-----IVVGLFGLLVIVNLF 127

Query: 451 WLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
                +  G     +FN          G ++ P   KE + +  ++ W+  + ++LP   
Sbjct: 128 GFGFSLFSGALALTIFNLPLMVRITEQGLASVPQAQKEASLALGLSKWKTIQSVMLPIAM 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I A G  + 
Sbjct: 188 PVILTGTILAAGRVFG 203


>gi|163857851|ref|YP_001632149.1| ABC transporter permease [Bordetella petrii DSM 12804]
 gi|163261579|emb|CAP43881.1| probable permease component of ABC transporter [Bordetella petrii]
          Length = 569

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 68/491 (13%), Positives = 150/491 (30%), Gaps = 55/491 (11%)

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIGAE 135
           +++ L     A    +    G +L+  L ++  I P         + F       ++  +
Sbjct: 77  LLASLIAVPLAYFTVRFEFRGALLIQTLGVLPLIMPPFVGAVAMQLIFGRSGTVNLLLDD 136

Query: 136 L------------AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
                          IF         +  ++  +L NI   +EE + +    G++ F  +
Sbjct: 137 WFGFTLPFMEGLNGVIFVESLHYFPFILMNLVVALRNIDGSMEEAAFNLGSRGFRLFRRV 196

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
             P ++PG V     S+     F      +V+G T +  P   +Y+ +     +      
Sbjct: 197 IFPLALPGYVAGA--SLVFVKVFDDLGTPLVLGTTNMLAP--QAYLRITQVGLEDPLGYV 252

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
             + M+G   L   L  R +         + +T     +S           +   G+ + 
Sbjct: 253 ISVIMIGFSILALWLSARVLK------GKDYSTLQKGGNSIHKRRLGPGESVLAYGWIAL 306

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                LS ++  L  +L  +  + P       ++    +                 A   
Sbjct: 307 VLLLVLSPHIGVLLLSLATVWSYAPLPDGYTLAHYAAVFTESHSMITNTLLYCGLAA--G 364

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISSKIQPFA 422
           +  I+       +L     G     R  +  + ++ + IP + + IG          P  
Sbjct: 365 VDVILGTAIAYLMLRTRLPG-----RQWLDFLASAALAIPGIVLAIGLLRTFRGVEFPLT 419

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASAFPNDFK 480
             L                       + WL +++ +      Y L + +A         +
Sbjct: 420 DTLIT---------------------SSWLLIMIAYSVRRLPYALRSCVAALQQINVSLE 458

Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR-TTGL 539
           E A S   +     R +++P +    + G +T+   A      + +          + G+
Sbjct: 459 EAAQSLGASRLSTIRRVVVPLMAGGMLAGFVTSFITAAVELSATIMLVTRDSQAPMSYGI 518

Query: 540 GAYIAESTEKG 550
             Y+  +  +G
Sbjct: 519 YLYMQSAAGRG 529



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 47/145 (32%), Gaps = 17/145 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +++      ++AS+I +P+  +        + +     +L          + +  +    
Sbjct: 68  SLYVAGWSALLASLIAVPLAYFTVRFEFRGALLIQTLGVLPLIMPPFVGAVAMQLIFGRS 127

Query: 446 LNPNLWL-----------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
              NL L                   +       +IL N++          +E A +   
Sbjct: 128 GTVNLLLDDWFGFTLPFMEGLNGVIFVESLHYFPFILMNLVVALRNIDGSMEEAAFNLGS 187

Query: 489 TGWRWWRYIILPGIFPYYVTGAITA 513
            G+R +R +I P   P YV GA   
Sbjct: 188 RGFRLFRRVIFPLALPGYVAGASLV 212


>gi|319783711|ref|YP_004143187.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169599|gb|ADV13137.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 273

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-----LDVHSLPQYASRTTLRMLSAMV 77
           + F L +  +++          P  I + +  +      + ++   Y   + L   +A +
Sbjct: 23  ILFFLWMISLSLKFEIDNGAYPPILIPEHLAWSNYAKVFEENNFLLYLWNSVLVTGTATL 82

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
           ++LL         A+ +     +  ++ I +  P L +L    + F  +    ++G    
Sbjct: 83  LALLIGVPAGYGIARLKAERSAV--VIMIARMTPGLSYLIPLFLLFQWVG---ILGTLWP 137

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
            I       V  + + M       P +LEE +     S WQ F  + +P + PG+V   +
Sbjct: 138 QIIIHLVVTVPIVVWVMIGYFETTPMELEEAANIDGASSWQVFRLVALPIAKPGIVVAFI 197

Query: 198 MSMSGGWF 205
           +S+   W 
Sbjct: 198 LSVIFSWN 205



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 3/148 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++       ++A +I +P G  I       S +     +    P   +   +     +  
Sbjct: 73  SVLVTGTATLLALLIGVPAGYGIARLKAERSAV--VIMIARMTPGLSYLIPLFLLFQWVG 130

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           +   LW  +++       I+  V+ G     P + +E A+    + W+ +R + LP   P
Sbjct: 131 ILGTLWPQIIIHLVVTVPIVVWVMIGYFETTPMELEEAANIDGASSWQVFRLVALPIAKP 190

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHI 532
             V   I +   +WN  +   V +    
Sbjct: 191 GIVVAFILSVIFSWNNFVFGVVLASRET 218


>gi|55379755|ref|YP_137605.1| sugar ABC transporter permease [Haloarcula marismortui ATCC 43049]
 gi|55232480|gb|AAV47899.1| sugar ABC transporter permease protein [Haloarcula marismortui ATCC
           43049]
          Length = 306

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 95/254 (37%), Gaps = 24/254 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT------LDVHSLPQYASRTTLRMLSA 75
           ++ F +    I  +    +  ++P   +   P                Y   + +   + 
Sbjct: 43  IIWFPIYYIFITSIKPSSEVLSLPITFLPQSPTAQNYVDIFTNRPFDNYTINSMIVATTT 102

Query: 76  MVISLLFTFVYATLAAKSRRL-GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134
            +I +    V     ++   L    L+  +   + IP +  +   V +F  +    +IG 
Sbjct: 103 TLICITLGTVTGYSFSRYDFLGNKSLLLSIVGARMIPPIALI---VPFFQIMSNPPLIGG 159

Query: 135 ELAAIF-----AIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
              +++      I T   +N+ F+++        IP  L+E +R    S W+ F  + +P
Sbjct: 160 LTGSLYDTRLALILTYTFFNLPFAVWIMKNYFDGIPESLDEQARIDGCSRWEAFVKIILP 219

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + PG+    +++    W   V + ++   +    LP     IA+++   D   + +A L
Sbjct: 220 MAKPGIAATAILAFIFSWNEFVFALVLTSSEQAQTLP-----IAVSLFVADDF-VDWAHL 273

Query: 247 TMLGVIFLYDQLLF 260
              G+I     +LF
Sbjct: 274 AAGGMIAALPGILF 287



 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 46/161 (28%), Gaps = 14/161 (8%)

Query: 426 AAFPANVFF-PLVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-------SA 474
              P      P             L  +L+ + L +  T  Y  FN+             
Sbjct: 136 RMIPPIALIVPFFQIMSNPPLIGGLTGSLYDTRLALILT--YTFFNLPFAVWIMKNYFDG 193

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P    E A     + W  +  IILP   P     AI A   +WN  + + V +      
Sbjct: 194 IPESLDEQARIDGCSRWEAFVKIILPMAKPGIAATAILAFIFSWNEFVFALVLTSSEQAQ 253

Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
               +   +  + +   +  +  G +I     +    F   
Sbjct: 254 TLP-IAVSLFVADDFVDWAHLAAGGMIAALPGILFGLFFQQ 293


>gi|270261136|ref|ZP_06189409.1| transporter [Serratia odorifera 4Rx13]
 gi|270044620|gb|EFA17711.1| transporter [Serratia odorifera 4Rx13]
          Length = 321

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 20/242 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     +  +  +  + + +T D   L  Y  ++      + +  L+  +  A   A S
Sbjct: 73  LMSWAEGKLDIALNFANYLQLTDDPLYLDAY-LQSLQVAAVSTICCLIIGYPLAWAVAHS 131

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++     +P  ++   LA 
Sbjct: 132 KSSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGILNNFLLWLGVIDHPLVILHTNLAV 191

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +  S +  M   +Y +L  +   L E S        + F+ + VP +  G++   M+
Sbjct: 192 YIGVVYSYLPFMVLPIYTALTRLDYSLVEASLDLGAKPLKTFFSVIVPLTRGGIIAGSML 251

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
                    V  E++   D+++    IG  +           +  A+ T++ ++ +   L
Sbjct: 252 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVASAVATVMLLLLIVPIL 307

Query: 259 LF 260
            F
Sbjct: 308 WF 309


>gi|209546100|ref|YP_002277990.1| sugar ABC transporter permease [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538957|gb|ACI58890.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 311

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 81/201 (40%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + +  +SL+ + + A    + R  G   V ++  +  +  P + F+   
Sbjct: 102 PGWLWNTMLVAVCSTFLSLVASVLGAYAIERVRFTGSRSVGLVIFLAYLVPPSILFIPLA 161

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 162 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQI 217

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 218 LTKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIPVGVLTELVRGDVFEWG 277

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 278 ALMAGALFGSLPVVILYSFFV 298



 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 53/173 (30%), Gaps = 12/173 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +G     I Y+    +Y   L+       TM   V    ++ +  +     I       
Sbjct: 84  VVGPTLAHIKYLFLETSYPGWLWN------TMLVAVCSTFLSLVASVLGAYAIERVRFTG 137

Query: 416 SKIQPFAQLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAG 471
           S+       LA    P+ +F PL          +  L L              L      
Sbjct: 138 SRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLLMGYF- 196

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             + P + +E A       W+    IILP   P  ++  I A   +WN  I +
Sbjct: 197 -RSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYA 248


>gi|163749241|ref|ZP_02156490.1| phosphate ABC transporter, permease protein, putative [Shewanella
           benthica KT99]
 gi|161330960|gb|EDQ01886.1| phosphate ABC transporter, permease protein, putative [Shewanella
           benthica KT99]
          Length = 304

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 6/162 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPIL--GFLTFTVVYF 123
           T   +L A+ ++ L         A +  +R   V    +DI+  IP +  G   F+++  
Sbjct: 73  TLTVVLCAVSLAALPGIASGIWLASAAEKRAQKVFSLAVDILAGIPSILMGLFGFSLILV 132

Query: 124 M-NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           +   +  +   + L A F +    +  +  +   +L ++P+ L     +  ++ WQ  + 
Sbjct: 133 LRASFFPQANVSLLLAAFCLALLILPYIACATQNALSSLPKQLTVTGAALGMTQWQATYR 192

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
           L +P + PG++  +M+++        A  M+        LPG
Sbjct: 193 LLLPQASPGIMSGLMLAIGRA-AEDTAVIMLTGAVANAGLPG 233



 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 10/181 (5%)

Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVG 405
             F  +  + + + +     +      + V   IW  C+ T+  V+  + +A++  I  G
Sbjct: 33  IIFKGLPTLGLKLFFGDTDPLAAMMGQKPVWEGIWPACVGTLTVVLCAVSLAALPGIASG 92

Query: 406 IWIGFR--PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           IW+                 +LA  P+ +   F   +  V      P   +SLL+     
Sbjct: 93  IWLASAAEKRAQKVFSLAVDILAGIPSILMGLFGFSLILVLRASFFPQANVSLLLAAFCL 152

Query: 462 -----WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
                 YI        S+ P       ++  +T W+    ++LP   P  ++G + A G 
Sbjct: 153 ALLILPYIACATQNALSSLPKQLTVTGAALGMTQWQATYRLLLPQASPGIMSGLMLAIGR 212

Query: 517 A 517
           A
Sbjct: 213 A 213


>gi|331082903|ref|ZP_08332024.1| phosphate ABC transporter [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400044|gb|EGG79697.1| phosphate ABC transporter [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 283

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    +   + ++             +      L+ +S         +  +  +V+SLL
Sbjct: 23  LVWISAIFTAVTLIFIVGYILIKGVPHLTPQLFELEYNSENVSMFPAIINTIFMIVLSLL 82

Query: 82  FTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
                   AA        K  +L  V+    + +  IP + +  F +++F+         
Sbjct: 83  VAGPLGIFAAVYLVEYAKKGNKLVSVVRVTAETLTGIPSIVYGLFGMLFFVTTLRWGY-- 140

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + LA  F +    +  +  +  ++L  +P    E S        +  + + +P ++PG+ 
Sbjct: 141 SMLAGAFTLAIMVLPVIMRTTEEALLAVPDTYREASFGLGAGKLRTIFVVILPSAVPGIF 200

Query: 194 WNMMMSMS 201
             +++S+ 
Sbjct: 201 SGVILSIG 208



 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++  IF    +  +   I  + + ++       +           +   + +I+++ ++ 
Sbjct: 25  WISAIFTAVTLIFIVGYILIKGVPHLTPQLFELEYNSENVSMFPAIINTIFMIVLSLLVA 84

Query: 402 IPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLW 451
            P+GI+              + S ++  A+ L   P+ V+  F ++    +       L 
Sbjct: 85  GPLGIFAAVYLVEYAKKGNKLVSVVRVTAETLTGIPSIVYGLFGMLFFVTTLRWGYSMLA 144

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
            +  +       I+        A P+ ++E +        R    +ILP   P   +G I
Sbjct: 145 GAFTLAIMVLPVIMRTTEEALLAVPDTYREASFGLGAGKLRTIFVVILPSAVPGIFSGVI 204

Query: 512 TACG 515
            + G
Sbjct: 205 LSIG 208


>gi|257890403|ref|ZP_05670056.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|257893010|ref|ZP_05672663.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
 gi|260559603|ref|ZP_05831783.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|261208667|ref|ZP_05923104.1| inner membrane component transport system [Enterococcus faecium TC
           6]
 gi|289566075|ref|ZP_06446511.1| phosphate ABC transporter, permease PstA [Enterococcus faecium
           D344SRF]
 gi|293556392|ref|ZP_06674973.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1039]
 gi|293560382|ref|ZP_06676875.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1162]
 gi|294616275|ref|ZP_06696068.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1636]
 gi|314939587|ref|ZP_07846814.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133a04]
 gi|314941213|ref|ZP_07848109.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133C]
 gi|314948623|ref|ZP_07851998.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0082]
 gi|314953352|ref|ZP_07856279.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133A]
 gi|314993430|ref|ZP_07858795.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133B]
 gi|314995779|ref|ZP_07860868.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133a01]
 gi|257826763|gb|EEV53389.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,410]
 gi|257829389|gb|EEV55996.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,408]
 gi|260074271|gb|EEW62593.1| inner membrane component transport system [Enterococcus faecium
           C68]
 gi|260077169|gb|EEW64889.1| inner membrane component transport system [Enterococcus faecium TC
           6]
 gi|289162097|gb|EFD09961.1| phosphate ABC transporter, permease PstA [Enterococcus faecium
           D344SRF]
 gi|291590789|gb|EFF22505.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1636]
 gi|291601459|gb|EFF31730.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1039]
 gi|291605670|gb|EFF35111.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1162]
 gi|313590051|gb|EFR68896.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133a01]
 gi|313592095|gb|EFR70940.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133B]
 gi|313594628|gb|EFR73473.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133A]
 gi|313599937|gb|EFR78780.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133C]
 gi|313641127|gb|EFS05707.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0133a04]
 gi|313644954|gb|EFS09534.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium TX0082]
          Length = 294

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 4/154 (2%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            + M+ +  ISL      +  A K+  L  V+   ++I+ S+P +    F  + F+  + 
Sbjct: 70  LITMIISFPISLGAGIYLSEYAGKN-WLTDVIRTSIEILSSLPSVVVGLFGFLVFVIQFQ 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A    +F   +  +T ++ +SL  +     E   +  LS W+    + VP +
Sbjct: 129 YGFSIISGALALTVFNLPL--LTRTVEESLQAVHYTQREAGLALGLSRWETVIKVVVPEA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            PG++  +++S SG  F   A+ +   G +   L
Sbjct: 187 TPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFP 429
           YQ+   +      +++ +++ +II+  I +  GI++        ++  I+   ++L++ P
Sbjct: 52  YQEGGGIGIQLFNSIYLLLITMIISFPISLGAGIYLSEYAGKNWLTDVIRTSIEILSSLP 111

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEV 482
           +     +VV    +            +I G     +FN+                  +E 
Sbjct: 112 S-----VVVGLFGFLVFVIQFQYGFSIISGALALTVFNLPLLTRTVEESLQAVHYTQREA 166

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             +  ++ W     +++P   P  +TG I + G  + 
Sbjct: 167 GLALGLSRWETVIKVVVPEATPGILTGVILSSGRIFG 203


>gi|227832395|ref|YP_002834102.1| ABC transporter system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183746|ref|ZP_06043167.1| ABC transporter system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453411|gb|ACP32164.1| ABC transporter system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 273

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 73/195 (37%), Gaps = 5/195 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNL 126
           + +  L    +++L     A   A+    G  +V  + +  S+ P +  +T     F NL
Sbjct: 69  SLIISLVTTAVAVLIGVFTAYALARYDFPGKGIVTGIILAASMFPAIALVTPLFQLFGNL 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                IG   A I    +  +    +++      +P +LEE +R    S  Q F  + +P
Sbjct: 129 E---WIGTYRAMIIPNISFALPLTVYTLLSFFRQLPWELEEAARVDGASRGQAFRLVLLP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P L    +++    W   + ++ +    T      I  + +     +   A   A  
Sbjct: 186 LAAPALFTTAIIAFITTWNEFMLAKQLSTTATEPVTVAIARF-SGPSAFEYPYAATMAAG 244

Query: 247 TMLGVIFLYDQLLFR 261
            ++ V  +   L+F+
Sbjct: 245 ALVTVPLIIMVLIFQ 259



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 2/196 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++   +V   +A +I +     +          +       + FPA     PL     + 
Sbjct: 69  SLIISLVTTAVAVLIGVFTAYALARYDFPGKGIVTGIILAASMFPAIALVTPLFQLFGNL 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     + +  I       ++ +++     P + +E A     +  + +R ++LP   
Sbjct: 129 EWIGTYRAMIIPNISFALPLTVYTLLSFFRQLPWELEEAARVDGASRGQAFRLVLLPLAA 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI A    WN  ++++  S       T  +  +   S  +  +   +    ++ 
Sbjct: 189 PALFTTAIIAFITTWNEFMLAKQLSTTATEPVTVAIARFSGPSAFEYPYAATMAAGALVT 248

Query: 564 CFVLALNRFLWHPLYL 579
             ++ +     H +  
Sbjct: 249 VPLIIMVLIFQHRIVA 264


>gi|283783352|ref|YP_003374106.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298252707|ref|ZP_06976501.1| ABC-type metal ion transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|283441446|gb|ADB13912.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297533071|gb|EFH71955.1| ABC-type metal ion transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 226

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 18/207 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T +    A + + L       L   S +        +  VL  I++I++S+P 
Sbjct: 16  LIEGVQDTLVMTSVATLFAYLIGLPVGVLLITSNKKGICPNAPINAVLGWIVNIVRSVP- 74

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  +G   A +  + T+  + +   + QSL  +   L E ++SF
Sbjct: 75  FIILLVAIIPFTRLIVGTSLGVPGAIVPLVITAAPF-VARVVEQSLAEVDGSLIEAAQSF 133

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS-YIAL 231
             S  Q    + +  ++P L+    ++    + F   +  +  G       G+G   I  
Sbjct: 134 GASKLQIVCKVLLWEALPSLIRGAALTFITLFGFSAMAGTVGAG-------GLGDIAIRY 186

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQL 258
             +      +  A++  + ++ +   L
Sbjct: 187 GYQRYQYDVMTVAVILCIILVQIVQSL 213



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 20/193 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T+    V  + A +I +PVG+ +             I++ +     ++ + P  +    +
Sbjct: 23  TLVMTSVATLFAYLIGLPVGVLLITSNKKGICPNAPINAVLGWIVNIVRSVPFIILLVAI 82

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    L     +  L+I    + +   V    +       E A SF  +  +  
Sbjct: 83  IPFTRLIVGTSLGVPGAIVPLVITAAPF-VARVVEQSLAEVDGSLIEAAQSFGASKLQIV 141

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFP 553
             ++L    P  + GA       +  S ++     G       GLG   I    ++  + 
Sbjct: 142 CKVLLWEALPSLIRGAALTFITLFGFSAMAGTVGAG-------GLGDIAIRYGYQRYQYD 194

Query: 554 EVVLGVLIMCCFV 566
            + + V++    V
Sbjct: 195 VMTVAVILCIILV 207


>gi|260772583|ref|ZP_05881499.1| phosphate transport system permease protein PstA [Vibrio
           metschnikovii CIP 69.14]
 gi|260611722|gb|EEX36925.1| phosphate transport system permease protein PstA [Vibrio
           metschnikovii CIP 69.14]
          Length = 456

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 56/152 (36%), Gaps = 4/152 (2%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIP 111
           +L    L      +   ML  MV+S+      A      A   +L   +   ++ + ++P
Sbjct: 227 SLASAGLAGAFMGSVFMMLIVMVLSVPIGVASAIYLEEFAPKNKLTDFIEVNINNLAAVP 286

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + F       F+  +   +    +  +       +  +  +   +L  IP  + + +  
Sbjct: 287 SIVFGLLGASVFILWFKLPLSAPFVGGLVLTL-MTLPTVIIATRSTLKAIPPSIRQAALG 345

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              S  Q  ++  +P ++PG++   ++ ++  
Sbjct: 346 IGASKTQAVFHHVLPLALPGILTGAILGIAQA 377



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 10/137 (7%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           V +++I  ++ +P+G+              ++  I+     LAA P+ VF  L  S    
Sbjct: 241 VFMMLIVMVLSVPIGVASAIYLEEFAPKNKLTDFIEVNINNLAAVPSIVFGLLGASVFIL 300

Query: 444 YH---LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
           +    L+      L++   T   ++    +   A P   ++ A     +  +   + +LP
Sbjct: 301 WFKLPLSAPFVGGLVLTLMTLPTVIIATRSTLKAIPPSIRQAALGIGASKTQAVFHHVLP 360

Query: 501 GIFPYYVTGAITACGGA 517
              P  +TGAI     A
Sbjct: 361 LALPGILTGAILGIAQA 377


>gi|297204471|ref|ZP_06921868.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
 gi|197715785|gb|EDY59819.1| binding-protein-dependent transport system inner membrane component
           [Streptomyces sviceus ATCC 29083]
          Length = 481

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 83/247 (33%), Gaps = 24/247 (9%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL--DVHSLPQYASRTTLRMLSAMVIS 79
            L   +++ ++         +  P          L  D    P   S + L      V S
Sbjct: 216 FLVLPILVIVVTSFGKDAFGSFPPSSWTLNWYKVLFADGSKWPAALSLSVLVACLTTVFS 275

Query: 80  LLFTFVYATLAAKSR------RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           L+     AT   +S         G+VL P++     IP +      +  F+   P  ++G
Sbjct: 276 LILGMTAATALVRSELPLRTAVYGLVLAPLV-----IPQVV---IALGLFLFFEPAAMLG 327

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
           + +A                +  +L  I   LE+ + S   S       +  P +MPGL+
Sbjct: 328 SPVAIALGHTVLASPIAVMILMATLKGIDERLEDAAASMGASRLTVARRITFPLAMPGLI 387

Query: 194 WNMMMSMSGGW------FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
              + S    +       F+ + E + +   V  +  +   +  ++     + I  A+L 
Sbjct: 388 AAAIFSFITSFDEFFISQFLSSVETVTLPVQVFNV--LQYDVDPSVTAISAILIGVAVLA 445

Query: 248 MLGVIFL 254
           +  V  +
Sbjct: 446 LTLVAVV 452



 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 92/303 (30%), Gaps = 33/303 (10%)

Query: 273 ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL 332
           E     Y   + +         L  +  +    F  L   V  +          FP +  
Sbjct: 184 EVPESRYGVMTELRSTLAGRTTL-AVLSTLILLFLVLPILVIVVTSFGKDAFGSFPPSSW 242

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
            L   + +      +   +   V +         I+       ++         ++ +V+
Sbjct: 243 TLNWYKVLFADGSKWPAALSLSVLVACLTTVFSLILGMTAATALVRSELPLRTAVYGLVL 302

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452
             ++   + I +G+++          +P A L +              ++  H      +
Sbjct: 303 APLVIPQVVIALGLFL--------FFEPAAMLGSPV-----------AIALGHTVLASPI 343

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +++++  T                   ++ A+S   +     R I  P   P  +  AI 
Sbjct: 344 AVMILMATL-----------KGIDERLEDAAASMGASRLTVARRITFPLAMPGLIAAAIF 392

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALN 570
           +   +++   +S+  S          +   +    +    +   +++GV ++   ++A+ 
Sbjct: 393 SFITSFDEFFISQFLSSVETVTLPVQVFNVLQYDVDPSVTAISAILIGVAVLALTLVAVV 452

Query: 571 RFL 573
           R L
Sbjct: 453 RRL 455


>gi|209550063|ref|YP_002281980.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535819|gb|ACI55754.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 564

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 68/507 (13%), Positives = 155/507 (30%), Gaps = 66/507 (13%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              + V+ +  + L  +    +       V   L   SL      T +  +   +ISL+ 
Sbjct: 18  FVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSATYYTIVTAIFGTIISLVI 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
             ++A L   +   G  L+    ++   IP        + +     P   +   L+    
Sbjct: 78  GCLFAFLLTLTDIRGKGLLSFFFVLPMMIPPQV---TALAWVQMSGPSSPLLKALSIAPP 134

Query: 142 IFTSQ----------------VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           + + Q                   +  ++   L  +PRD  E +R    S  + F  + +
Sbjct: 135 LGSPQPLYSVGGIALLYGVQHAPLVYLALRAGLMTLPRDGVEAARLSGASSLRVFRDIIL 194

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+PG++    +S              V       +P                    A+
Sbjct: 195 PLSLPGIIAGAAIS-------------FVSCTGNFGIP--------------------AI 221

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L +   IF    L+F     ++++     T G     S V+ +      +          
Sbjct: 222 LGIPASIFTLPTLIFTKFSAFTSR-----TFGDVAVLSAVIAMISVAGLMIQDRALRGRD 276

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
           +  +  +       LG  RF F      +      +    +    +V    + + ++++ 
Sbjct: 277 YRVIGLSGASAAFELGAWRFAFTPLLWAILFLMLAAPFFALVAGALVPAYGVPLTFKTMS 336

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQL 424
                               ++       +    + +     +  R   +S  +    ++
Sbjct: 337 LHAFQEILLRQAVTRTAFINSLSLAAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEI 396

Query: 425 LAAFP----ANVFFPLVVSCVSYYHLNP--NLWLSLLMIFGTQWYI-LFNVIAGASAFPN 477
             + P    A  F  +  + + + H++    +W+ L+    + + + L  V++       
Sbjct: 397 PYSLPGIVMAVSFILVFAAPIPFLHISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDP 456

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFP 504
             +E A     + +R    II+P I P
Sbjct: 457 ALEEAARLSGASFFRRLFDIIVPLIAP 483


>gi|50841888|ref|YP_055115.1| ABC transporter-associated permease [Propionibacterium acnes
           KPA171202]
 gi|50839490|gb|AAT82157.1| ABC transporter-associated permease [Propionibacterium acnes
           KPA171202]
 gi|313814410|gb|EFS52124.1| ABC transporter, permease protein [Propionibacterium acnes
           HL025PA1]
 gi|315106449|gb|EFT78425.1| ABC transporter, permease protein [Propionibacterium acnes
           HL030PA1]
          Length = 215

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 21/219 (9%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP---ILDIMQSI 110
           I+ +   + Q  S   +  ++ +++SLL +      A ++R    +LVP   +L  + S+
Sbjct: 6   ISENWDQIWQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSL 65

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P+   L   +        G  I   +  + A+    +  +  +   +  ++ R +   + 
Sbjct: 66  PLFVLLPLIL--------GTKILDPINVVVALTLYGIAVLVRTATDAFDSVGRSVRRDAV 117

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           +   S  Q FW + +P ++P LV  M + +S     +V+   +V       +P +G +  
Sbjct: 118 AIGHSDSQVFWRVALPLAVPALVAGMRV-VSASTLSLVSVGALVG------VPSLGYFFT 170

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266
              +      I   ++  L +  ++D ++    R +  W
Sbjct: 171 DGYQRSFPTEIWVGIIGTLVLAIIFDLVIVCVGRLLTPW 209



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
           P+G W          + P A +L A P+   F L+   +    L+P   +  L ++G   
Sbjct: 37  PLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPLILGTKILDPINVVVALTLYGIAV 96

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
            +         +     +  A +   +  + +  + LP   P  V G         +   
Sbjct: 97  LVRTAT-DAFDSVGRSVRRDAVAIGHSDSQVFWRVALPLAVPALVAGMRVVSASTLSLVS 155

Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
           V  +            LG +  +  ++    E+ +G++      +  +
Sbjct: 156 VGALVGVPS-------LGYFFTDGYQRSFPTEIWVGIIGTLVLAIIFD 196


>gi|332709733|ref|ZP_08429692.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane
           protein 2 [Lyngbya majuscula 3L]
 gi|332351560|gb|EGJ31141.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane
           protein 2 [Lyngbya majuscula 3L]
          Length = 289

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 82/208 (39%), Gaps = 9/208 (4%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
             +  L  Y   +T   +++ ++ L      A   A+    G  ++    I+ ++     
Sbjct: 72  FTLRPLVHYIFNSTFVSITSTLLCLGIGTPAAYALARLTLRGEKIIIAGIIIITL----- 126

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSF 172
             F +++   L   K+I      +  I +    N+  ++         +P +LE+ ++  
Sbjct: 127 FPFILIFLGLLELIKIIKLGNNYLSLIISYTAINLPLTLLVMRSFFQQLPPELEDAAKVD 186

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S WQ    + +P ++P LV   +++    W   + +   +  +++  LP + +     
Sbjct: 187 GYSTWQMLIEILLPLTVPALVTTGILTFIFAWNEFILALTFISQESMKTLP-VAAAQLSG 245

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLF 260
              +++     A +T++G   L   ++F
Sbjct: 246 SLGKEIPYGSIAAMTVIGTFPLVVLVMF 273



 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 55/157 (35%), Gaps = 20/157 (12%)

Query: 433 FFPLVVSCVSYYHL-------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            FP ++  +    L       N  L L +          L  + +     P + ++ A  
Sbjct: 126 LFPFILIFLGLLELIKIIKLGNNYLSLIISYTAINLPLTLLVMRSFFQQLPPELEDAAKV 185

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS-------EVASWGHIHLRTTG 538
              + W+    I+LP   P  VT  I     AWN  I++        + +      + +G
Sbjct: 186 DGYSTWQMLIEILLPLTVPALVTTGILTFIFAWNEFILALTFISQESMKTLPVAAAQLSG 245

Query: 539 -LGA-----YIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            LG       IA  T  G+FP VVL +      V  L
Sbjct: 246 SLGKEIPYGSIAAMTVIGTFPLVVLVMFFQGKIVQGL 282


>gi|153847609|ref|ZP_01993945.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ3810]
 gi|149744721|gb|EDM56189.1| phosphate ABC transporter, permease protein PstC [Vibrio
           parahaemolyticus AQ3810]
          Length = 233

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 15/222 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73
           RIF  +F   A + ++ +  I    ++E+        +  I L  + LP  A      M+
Sbjct: 2   RIFHGLFLTSAVIGIVSLAVIAYFIVRESIPAFQEAGVSGIVLGQNWLPP-ALYGVATMI 60

Query: 74  SAMVIS----LLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF----LTFT 119
            A V+S    ++       L A        +RL  V+ P ++++  IP + +    L   
Sbjct: 61  VASVVSTAGAVMVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLAGIPSVVYGFFGLVII 120

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           V    +++        LA I  +    +  +      S+  +PR  +E S +   S    
Sbjct: 121 VPLIQDIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKIYT 180

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            + L VP +  G++  +++ +       +A  M++     I 
Sbjct: 181 IFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNVGQIA 222



 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASI-IWIPVGIWIGFR------PHISSKIQPFAQLLA 426
           Q+ L     G  TM    V+    ++ + +PVG+             ++  I+P  +LLA
Sbjct: 46  QNWLPPALYGVATMIVASVVSTAGAVMVGVPVGVLTAIFIAEIAPKRLADVIRPAVELLA 105

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478
             P+ V+         PL+    +    N  L   +++       ++        A P  
Sbjct: 106 GIPSVVYGFFGLVIIVPLIQDIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRA 165

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
           +KE + +   +       +++P      +TG I   G A   ++   +   
Sbjct: 166 YKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMG 216


>gi|86360826|ref|YP_472713.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284928|gb|ABC93986.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 299

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L    +  +SL+ +   A    + R  G   + ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAAGSTALSLVASVFGAYAIERVRFTGARQIGLVIFLAYLIPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 SLMAGALFGSLPVVILYSFFV 286



 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 12/173 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +G     I Y+    +Y   L+       TM        ++ +  +     I       
Sbjct: 72  VVGPTLDHIKYLFLETSYPGWLWN------TMLVAAGSTALSLVASVFGAYAIERVRFTG 125

Query: 416 SKIQPFAQLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAG 471
           ++       LA    P+ +F PL          +  L L              L      
Sbjct: 126 ARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLLMGYF- 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             + P + +E A       W+    IILP   P  ++  I A   +WN  I +
Sbjct: 185 -RSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|323485680|ref|ZP_08091018.1| hypothetical protein HMPREF9474_02769 [Clostridium symbiosum
           WAL-14163]
 gi|323695142|ref|ZP_08109281.1| phosphate ABC transporter [Clostridium symbiosum WAL-14673]
 gi|323401030|gb|EGA93390.1| hypothetical protein HMPREF9474_02769 [Clostridium symbiosum
           WAL-14163]
 gi|323500800|gb|EGB16723.1| phosphate ABC transporter [Clostridium symbiosum WAL-14673]
          Length = 289

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   ++  ++I+       A      AK  RL   +    +I+  IP + F  F +V+F 
Sbjct: 74  TLYIIVITLIIAAPVGIGSAIYLNEYAKPGRLVRTIEFTTEILSGIPSIIFGLFGMVFFG 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                K+  + L   F +    +  +T S  ++L  +P      +     + W     + 
Sbjct: 134 TTL--KLGYSVLTGSFTLTLMVLPLITRSTQEALKTVPDSYRFGALGIGATKWYMIRTIL 191

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P + PG++  +++S+ 
Sbjct: 192 LPSAAPGILTGIILSIG 208



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 90/266 (33%), Gaps = 25/266 (9%)

Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----------DVLYVIW 381
            ++ ++ +V   L          + +GI        +   ++Q              ++ 
Sbjct: 10  RKVRTSDQVLKGLIYLAAAAAISLLVGIMGYVFIRGLPQLSWQFLSTVQSARKGTFGILG 69

Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFPANVF--FPL 436
               T++ +V+ +IIA+ + I   I++        +   I+   ++L+  P+ +F  F +
Sbjct: 70  NIVNTLYIIVITLIIAAPVGIGSAIYLNEYAKPGRLVRTIEFTTEILSGIPSIIFGLFGM 129

Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496
           V    +       L  S  +       I  +        P+ ++  A     T W   R 
Sbjct: 130 VFFGTTLKLGYSVLTGSFTLTLMVLPLITRSTQEALKTVPDSYRFGALGIGATKWYMIRT 189

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY----------IAES 546
           I+LP   P  +TG I + G     S      +     L  +  G            +  S
Sbjct: 190 ILLPSAAPGILTGIILSIGRIVGESAALLFTAGSGFQLPKSLFGKLFESSGTLTIQLYLS 249

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
            +K  + +     +++   VL +N  
Sbjct: 250 MQKAKYDQAFGIAVVLLIIVLGINLL 275


>gi|284166705|ref|YP_003404984.1| phosphate ABC transporter inner membrane protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284016360|gb|ADB62311.1| phosphate ABC transporter, inner membrane subunit PstA
           [Haloterrigena turkmenica DSM 5511]
          Length = 587

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 78/195 (40%), Gaps = 14/195 (7%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL- 80
           L   ++   ++  +L        P   +D   +T    S  + A      + S M+I+  
Sbjct: 317 LPVLIVAGAVLGTVLVRTMGFPGPNSWLDPSFVTGSASSTARDAGFYPPIVGSVMIIAFV 376

Query: 81  -LFTFVYATLAAK-----------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            L +FV    +A            +  +  V+   +  + ++P + +    +  F+NL  
Sbjct: 377 ALVSFVLGVGSAVFLEEYASDSGITGAITRVIQINIANLAAVPSVVYGLLGLGLFINLL- 435

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
           G  +GA + A+  +    +     S  +++ ++P DL   S +   + WQ    + +P +
Sbjct: 436 GLGMGAIVTAVLTLSLLILPITIISAQEAIRSVPDDLRNGSYAMGATRWQTTRNVVLPEA 495

Query: 189 MPGLVWNMMMSMSGG 203
            PG++   ++++   
Sbjct: 496 FPGILTGTILALGRA 510



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 23/210 (10%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT---- 386
           F +         +  +    +V G  +G             ++ D  +V      T    
Sbjct: 301 FGRRTFTAERGRIGLLLPVLIVAGAVLGTVLVRTMGFPGPNSWLDPSFVTGSASSTARDA 360

Query: 387 ---------MFRVVVLIIIASIIWIPVGIWI-------GFRPHISSKIQPFAQLLAAFPA 430
                    +  +  + +++ ++ +   +++       G    I+  IQ     LAA P+
Sbjct: 361 GFYPPIVGSVMIIAFVALVSFVLGVGSAVFLEEYASDSGITGAITRVIQINIANLAAVPS 420

Query: 431 NVFFPLVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            V+  L +          +   +   L +        + +      + P+D +  + +  
Sbjct: 421 VVYGLLGLGLFINLLGLGMGAIVTAVLTLSLLILPITIISAQEAIRSVPDDLRNGSYAMG 480

Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGA 517
            T W+  R ++LP  FP  +TG I A G A
Sbjct: 481 ATRWQTTRNVVLPEAFPGILTGTILALGRA 510


>gi|317129721|ref|YP_004096003.1| phosphate ABC transporter inner membrane subunit PstA [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474669|gb|ADU31272.1| phosphate ABC transporter, inner membrane subunit PstA [Bacillus
           cellulosilyticus DSM 2522]
          Length = 307

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 6/203 (2%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRVVVLIIIASII 400
           +   +  F +    A G+ W SI ++ N   T  +   +      T++ +V++  +  ++
Sbjct: 46  FGFVVLLFLLYRIFADGLGWISIDFLTNKLSTLPERAGIFGAIVGTIWLMVIVGPLTMLL 105

Query: 401 WIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
            I   I++     +  + S IQ     LA  P+ VF    L +    +      +   + 
Sbjct: 106 GIGTAIYLEEYAKKGKVHSFIQTNITNLAGVPSIVFGLLGLTIFVRMFGFGPSIIAGGMT 165

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           M       ++        + P   +E +     T W+  + I+LP      +TG I A  
Sbjct: 166 MSLLVLPIVVVAAQEAIRSVPQHLREASYGMGATKWQTIKNIVLPASIAGILTGVILALS 225

Query: 516 GAWNASIVSEVASWGHIHLRTTG 538
            A   +          + +   G
Sbjct: 226 RAIGETAPLVALGIPALIIPIPG 248



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 13/205 (6%)

Query: 10  FISRRIFPNIFDLLAFVL--VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS- 66
            +S RIF N    + F L  + G + +L    +        + I  +T  + +LP+ A  
Sbjct: 25  RMSFRIFLNNAVKILFFLSTMFGFVVLLFLLYRIFADGLGWISIDFLTNKLSTLPERAGI 84

Query: 67  -----RTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTF 118
                 T   M+    +++L     A      AK  ++   +   +  +  +P + F   
Sbjct: 85  FGAIVGTIWLMVIVGPLTMLLGIGTAIYLEEYAKKGKVHSFIQTNITNLAGVPSIVFGLL 144

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            +  F+ ++      + +A    +    +  +  +  +++ ++P+ L E S     + WQ
Sbjct: 145 GLTIFVRMF--GFGPSIIAGGMTMSLLVLPIVVVAAQEAIRSVPQHLREASYGMGATKWQ 202

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
               + +P S+ G++  +++++S  
Sbjct: 203 TIKNIVLPASIAGILTGVILALSRA 227


>gi|260596697|ref|YP_003209268.1| putative D-methionine transport system permease metI [Cronobacter
           turicensis z3032]
 gi|260215874|emb|CBA28391.1| Probable D-methionine transport system permease protein metI
           [Cronobacter turicensis z3032]
          Length = 249

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 88/243 (36%), Gaps = 17/243 (6%)

Query: 35  LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-- 92
           +   ++ T    ++++ +   L +  L      T      + V + +   V         
Sbjct: 15  IYACMRSTARLLNMLESLFPHLKLDQLLAATQETLYMTALSGVATFVLGIVLGLALFLTA 74

Query: 93  ------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
                 +R +  V+  ++++ +SIP    L   ++ F     G ++GA  AA+ A+    
Sbjct: 75  RGGLFENRLVYSVISIVVNVFRSIP-FIILIVLLIPFTKTIIGTILGAN-AALPALIVGA 132

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
                  +   L  + + + E +RS         + + +P S P LV  + ++       
Sbjct: 133 APFYARLVEIGLREVDKGVIEATRSMGARMSTLIFRVLLPESSPALVSGITVT------- 185

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266
           ++A         VI   G+G+   L   +++   +       + VI    Q +   +  +
Sbjct: 186 LIALVSYSAMAGVIGAGGLGNLAYLEGFQRNHNDVTLVATVAILVIVFIIQFIGDALTSY 245

Query: 267 SNK 269
            +K
Sbjct: 246 LDK 248



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 19/243 (7%)

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-- 410
               +    + +  + + F +  +  ++     T++   +  +   ++ I +G+ +    
Sbjct: 15  IYACMRSTARLLNMLESLFPHLKLDQLLAATQETLYMTALSGVATFVLGIVLGLALFLTA 74

Query: 411 ------RPHISSKIQPFAQLLAAFPANVFFPLVVSC---VSYYHLNPNLWLSLLMIFGTQ 461
                    + S I     +  + P  +   L++     +    L  N  L  L++    
Sbjct: 75  RGGLFENRLVYSVISIVVNVFRSIPFIILIVLLIPFTKTIIGTILGANAALPALIVGAAP 134

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
           +Y    V  G         E   S           ++LP   P  V+G         + S
Sbjct: 135 FYARL-VEIGLREVDKGVIEATRSMGARMSTLIFRVLLPESSPALVSGITVTLIALVSYS 193

Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581
            ++ V   G       GLG        + +  +V L   +    ++ + +F+   L  Y 
Sbjct: 194 AMAGVIGAG-------GLGNLAYLEGFQRNHNDVTLVATVAILVIVFIIQFIGDALTSYL 246

Query: 582 TRC 584
            + 
Sbjct: 247 DKR 249


>gi|156935283|ref|YP_001439199.1| DL-methionine transporter permease subunit [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156533537|gb|ABU78363.1| hypothetical protein ESA_03140 [Cronobacter sakazakii ATCC BAA-894]
          Length = 217

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ +L  +L  +++I +SI
Sbjct: 7   WLLVRGIWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSALVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F     G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRAIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPSGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPMQIVRKVLLPEALPGLVNAATITL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRILSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E + +   T  +  
Sbjct: 76  IPFTRAIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPSGLIEASRAMGATPMQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R ++LP   P  V  A          S +      G +       G     +T
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|156973510|ref|YP_001444417.1| hypothetical protein VIBHAR_01201 [Vibrio harveyi ATCC BAA-1116]
 gi|156525104|gb|ABU70190.1| hypothetical protein VIBHAR_01201 [Vibrio harveyi ATCC BAA-1116]
          Length = 225

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPILGFL 116
              T   +  A ++          +   +++        L  VL  I++I +S+P L  +
Sbjct: 21  TLETLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNRVLGAIVNIGRSVPFLVLM 80

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++    L  G  IG   AAI  +    +  +   +  +L  +P  L E ++S   + 
Sbjct: 81  -VAIIPVTKLLVGTFIGTT-AAIVPLTIGAIPFVARLIEGALLEVPSGLVEAAQSMGATP 138

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSM 200
            Q    + +P +MP +V ++ +++
Sbjct: 139 TQIITKVLLPEAMPTIVNSVTITL 162



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 22/195 (11%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF---- 433
           T++ V V  I+   + IP+G+ +             ++  +     +  + P  V     
Sbjct: 24  TLYMVAVAGIVGFAVGIPLGVILHTTKKGGLLENTKLNRVLGAIVNIGRSVPFLVLMVAI 83

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
            P+    V  +       + L +  G   ++   +       P+   E A S   T  + 
Sbjct: 84  IPVTKLLVGTFIGTTAAIVPLTI--GAIPFVARLIEGALLEVPSGLVEAAQSMGATPTQI 141

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              ++LP   P  V           + S ++     G +       G +         + 
Sbjct: 142 ITKVLLPEAMPTIVNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH--------RYD 193

Query: 554 EVVLGVLIMCCFVLA 568
            V++ V ++   VL 
Sbjct: 194 VVIMAVTVVMLIVLV 208


>gi|146301723|ref|YP_001196314.1| DL-methionine transporter permease subunit [Flavobacterium
           johnsoniae UW101]
 gi|146156141|gb|ABQ06995.1| binding-protein-dependent transport systems inner membrane
           component [Flavobacterium johnsoniae UW101]
          Length = 217

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L +    T +    +     L       L   +R+        L  +L  ++++ +SIP 
Sbjct: 9   LVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVVNVFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F     G  IG   AA+  +       +   +  SL  +P  L E +R+ 
Sbjct: 68  FIILIVWMIPFTRAIVGTSIGVS-AALVPLSIGAAPFIARLVENSLLGLPSGLIEAARAL 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             + +Q  + + +P ++P L+    +++
Sbjct: 127 GATPFQIVYKVLLPEALPSLINAASITL 154



 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPAN---VFF 434
           T+    V      +I +P G+ +             ++  +     +  + P     V+ 
Sbjct: 16  TIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVVNVFRSIPFIILIVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +  +  L  L I G   +I   V       P+   E A +   T ++  
Sbjct: 76  IPFTRAIVGTSIGVSAALVPLSI-GAAPFIARLVENSLLGLPSGLIEAARALGATPFQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGG 516
             ++LP   P  +  A      
Sbjct: 135 YKVLLPEALPSLINAASITLIT 156


>gi|260574721|ref|ZP_05842724.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sp. SW2]
 gi|259023138|gb|EEW26431.1| phosphate ABC transporter, inner membrane subunit PstA [Rhodobacter
           sp. SW2]
          Length = 430

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 64/171 (37%), Gaps = 4/171 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  L      +   +L+  V++       A      A   R+   +   ++ + ++P +
Sbjct: 204 ELAGLTGALVGSFYALLTCFVLAFPLGIGSAIYLEEFAPKNRISDFIEININNLAAVPSI 263

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  F+N + G    A +     +    +  +  +   +L  +P  + E +    
Sbjct: 264 VFGLLALAVFLNGF-GLPRSAPIVGGLTLALMTLPTIIIATRAALKAVPPSIREAALGIG 322

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224
            S  Q  ++  +P +MPG++   ++ ++          +I +   +   PG
Sbjct: 323 ASRQQVVFHHVLPLAMPGVLTGTILGLARALGEAAPLLLIGMNAFITAAPG 373



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 17/258 (6%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
           +     +N+R+S      +  +     I   +    +      + ++  +      + + 
Sbjct: 159 DRATPAANRRLSDEQVAAFDALAADGRISKPFNWALFTNADSRFPELAGLTGALVGSFYA 218

Query: 390 VVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           ++   ++A  + I   I++     +  IS  I+     LAA P+ VF  L ++       
Sbjct: 219 LLTCFVLAFPLGIGSAIYLEEFAPKNRISDFIEININNLAAVPSIVFGLLALAVFLNGFG 278

Query: 447 NPNLWLS---LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
            P        L +   T   I+    A   A P   +E A     +  +   + +LP   
Sbjct: 279 LPRSAPIVGGLTLALMTLPTIIIATRAALKAVPPSIREAALGIGASRQQVVFHHVLPLAM 338

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG--------LGAYI---AESTEKGSF 552
           P  +TG I     A   +    +           G        L   I   A+STE+G  
Sbjct: 339 PGVLTGTILGLARALGEAAPLLLIGMNAFITAAPGSPFDPATALPTQILIWADSTERGFV 398

Query: 553 PEVVLGVLIMCCFVLALN 570
                 VL++  F+L +N
Sbjct: 399 SRTSAAVLVLLGFLLIMN 416


>gi|237729504|ref|ZP_04559985.1| binding-protein-dependent transport system inner membrane component
           [Citrobacter sp. 30_2]
 gi|226909233|gb|EEH95151.1| binding-protein-dependent transport system inner membrane component
           [Citrobacter sp. 30_2]
          Length = 217

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ +L   L  +++I +SI
Sbjct: 7   WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRTLSALVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRMIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPTGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPLQIVRKVLLPEALPGLVNAATITL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 48/176 (27%), Gaps = 12/176 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRTLSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRMIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPTGLIEASRAMGATPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           R ++LP   P  V  A          S +      G +       G     +T   
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMN 190


>gi|126667656|ref|ZP_01738625.1| Putative ABC transporter permease [Marinobacter sp. ELB17]
 gi|126627925|gb|EAZ98553.1| Putative ABC transporter permease [Marinobacter sp. ELB17]
          Length = 243

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 72  MLSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129
            L +  +++        + +  K R L    +  L++  +IP L  L  ++ +       
Sbjct: 52  TLISGGLAVPVGIALGIMLSRPKFRNLSEWTMQGLNVGTTIPTLAILALSMSFLGIGM-- 109

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
                 L AIF +F + +  +  + Y  L  +P  L+E +    +S  Q    + +P ++
Sbjct: 110 ------LPAIFGLFIASLLPIVRNTYTGLLGVPAHLKEAAAGIGMSSTQMLLKVEIPNAL 163

Query: 190 PGLVWNMMMSMSG 202
             +   +  +++ 
Sbjct: 164 YVMFAGVRTALAI 176



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 12/221 (5%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIW 407
           F  +    + +A   +G  +      D +   +   + + R  V L +I+  + +PVGI 
Sbjct: 6   FNNIGRGVMYLAVLLLGIYLQRTGLIDDILYYYDDIVYLGRQHVELTLISGGLAVPVGIA 65

Query: 408 IG---FRPHISSKIQPFAQLLA---AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461
           +G    RP   +  +   Q L      P      L +S +        L     +   + 
Sbjct: 66  LGIMLSRPKFRNLSEWTMQGLNVGTTIPTLAILALSMSFLGIG----MLPAIFGLFIASL 121

Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
             I+ N   G    P   KE A+   ++  +    + +P        G  TA        
Sbjct: 122 LPIVRNTYTGLLGVPAHLKEAAAGIGMSSTQMLLKVEIPNALYVMFAGVRTALAINVGTV 181

Query: 522 IVSEVASWGHIHLRT-TGLGAYIAESTEKGSFPEVVLGVLI 561
            ++ +   G +     TG+     +    G+ P  +L +L+
Sbjct: 182 PLAFLIGGGGLGELIFTGIALLNTQMMLAGAIPTAMLAILV 222


>gi|54020582|ref|YP_116067.1| spermidine/putrescine ABC transporter permease [Mycoplasma
           hyopneumoniae 232]
 gi|53987755|gb|AAV27956.1| spermidine/putrescine transport system permease [Mycoplasma
           hyopneumoniae 232]
          Length = 286

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 103/283 (36%), Gaps = 33/283 (11%)

Query: 13  RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL------PQYAS 66
           ++       L+   ++  +I +++  I         +     + D H L       Q   
Sbjct: 15  KKSLNPRISLVIPYVIFALIFVIIPLILLFGKSVSPLVHNSQSFDNHLLIKEKTTWQIIG 74

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRR-------LGMVLVPILDIMQSIPILGFLTFT 119
           R+    L +  I L+  F YA   A SR        L ++  P++ I     +    +  
Sbjct: 75  RSIFVGLISAFICLILAFPYAFFVANSRSKIFKIYSLSLIASPLI-IFTIAKVFALRSLF 133

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F            L  IF  F      M   +Y    ++P++L E       S +  
Sbjct: 134 LLLFDEGSLNNNSFMVLGLIFLNFPF----MVLPLYTIFRDMPKNLLEAGTDLGYSKFWL 189

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG----IGSYIALAIKE 235
              + +P+S   +      S      F++A+  IVV D ++P       IG+ I  +   
Sbjct: 190 LIKVVLPYSFRAI------SSGFALVFLMAATSIVVSDKLLPNGSQNQLIGNLINNSANI 243

Query: 236 QDLLAIL----YAMLTMLGVIFLYDQLLFRPMIVWSNK-FRLE 273
            +   +       ++T+L  I +Y  + F P+I+   K F+ +
Sbjct: 244 SNPFDLARVSSLVLVTLLVFIGIYSLIHFIPIIIMKIKGFKYD 286


>gi|331002687|ref|ZP_08326202.1| hypothetical protein HMPREF0491_01064 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407100|gb|EGG86604.1| hypothetical protein HMPREF0491_01064 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 226

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 14/157 (8%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLF----------TFVYATLAAKSRRLGMVLVPI 103
           I+   + L +   +T   M+ +  ISL+F          T     L  K+  +  +L  +
Sbjct: 12  ISAKPNELIEATLQTLNMMILSGAISLIFGIIFGVIIVVTSPKGIL--KNAFIYNILDKL 69

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +++ +SIP    L   ++ F  +  G  IG +  AI  +    V   T  +  +L  +  
Sbjct: 70  INVFRSIP-FVILLAALIPFTRMVVGTAIGTK-GAILPLVFGTVPFFTRQIESALYEVDT 127

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            L E ++S   S  +  + + +  S+PG++  + ++ 
Sbjct: 128 GLIEAAQSMGSSPVEIIFRVYLRESLPGIIRGVQITF 164



 Score = 38.8 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 48/175 (27%), Gaps = 10/175 (5%)

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNPNLWLSLLMIF 458
           P GI       I + +     +  + P         P     V          L L  +F
Sbjct: 53  PKGIL--KNAFIYNILDKLINVFRSIPFVILLAALIPFTRMVVGTAIGTKGAILPL--VF 108

Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518
           GT  +    + +          E A S   +       + L    P  + G         
Sbjct: 109 GTVPFFTRQIESALYEVDTGLIEAAQSMGSSPVEIIFRVYLRESLPGIIRGVQITFISLL 168

Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             + ++     G +       G     +    ++  V++ ++++       NR +
Sbjct: 169 GLTAMAGAIGGGGLGDFAIRYGH--QRNQTDVTYATVIIILIMVSLIQGIGNRAI 221


>gi|327188247|gb|EGE55467.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 299

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + +  +SL+ +   A    + R  G   + ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTALSLVASVFGAYAIERVRFTGSRQIGLVIFLAYLIPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 SLMAGALFGSLPVVILYSFFV 286



 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 12/166 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            I Y+    +Y   L+       TM   V    ++ +  +     I       S+     
Sbjct: 79  HIKYLFLETSYPGWLWN------TMLVAVGSTALSLVASVFGAYAIERVRFTGSRQIGLV 132

Query: 423 QLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPND 478
             LA    P+ +F PL          +  L L              L        + P +
Sbjct: 133 IFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLLMGYF--RSIPFE 190

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            +E A       W+    IILP   P  ++  I A   +WN  I +
Sbjct: 191 LEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|322371974|ref|ZP_08046516.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
 gi|320548396|gb|EFW90068.1| binding-protein-dependent transport systems inner membrane
           component [Haladaptatus paucihalophilus DX253]
          Length = 290

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 8/252 (3%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74
           +FP I+ ++  + V  +  +   GI        + + + + L+  +   +   + +  L+
Sbjct: 35  LFPIIWMVVTSLNVTTVEELTQIGITGWLSGVSLNNYMTM-LNQTTFLTWFINSAIVSLA 93

Query: 75  AMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133
           + +IS++     A    + R R   V+   L I Q  P +  +    + F +L     + 
Sbjct: 94  STLISIVVCIFGAYSIGRLRFRGRKVVATFLLITQMFPYVVIVIPLFLVFRDLGLFNTLT 153

Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193
             + A  A        M    Y+   N+P  LEE +     +       + +P S P + 
Sbjct: 154 GLVIAYIAFTLPFTTWMLRGFYE---NLPAQLEEAAMVDGSTRIGAVISVILPLSAPAIA 210

Query: 194 WNMMMSMSGGWF-FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              +      W  F+ A  +I         PGIGS+I       +   I+     +   +
Sbjct: 211 TTFIFGWILAWNEFLFALVLINDPTKKTLPPGIGSWIGQ--NTVNWGLIMAGSTAVSLPL 268

Query: 253 FLYDQLLFRPMI 264
            L    L R ++
Sbjct: 269 LLLFVFLQRYLV 280



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 5/207 (2%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI-SSKI 418
            W S   + N+ T  +    +     +    +   +I+ ++ I     IG         +
Sbjct: 61  GWLSGVSLNNYMTMLNQTTFLTWFINSAIVSLASTLISIVVCIFGAYSIGRLRFRGRKVV 120

Query: 419 QPFAQLLAAFP-ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             F  +   FP   +  PL +        N    L +  I  T  +  + +       P 
Sbjct: 121 ATFLLITQMFPYVVIVIPLFLVFRDLGLFNTLTGLVIAYIAFTLPFTTWMLRGFYENLPA 180

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN-ASIVSEVASWGHIHLRT 536
             +E A     T       +ILP   P   T  I     AWN       + +        
Sbjct: 181 QLEEAAMVDGSTRIGAVISVILPLSAPAIATTFIFGWILAWNEFLFALVLINDPTKKTLP 240

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMC 563
            G+G++I ++T   ++  ++ G   + 
Sbjct: 241 PGIGSWIGQNTV--NWGLIMAGSTAVS 265


>gi|302670689|ref|YP_003830649.1| spermidine/putrescine ABC transporter permease PotB [Butyrivibrio
           proteoclasticus B316]
 gi|302395162|gb|ADL34067.1| spermidine/putrescine ABC transporter permease protein PotB
           [Butyrivibrio proteoclasticus B316]
          Length = 274

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 94/255 (36%), Gaps = 19/255 (7%)

Query: 18  NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
                    +V+ +  +  +G+  +     + +I  I +    L +   R+ +  + + +
Sbjct: 16  PYIAWAIIFIVVPLCMVFYYGLTNSDGAFTLDNIATI-IKPGYL-KALKRSIILAIISTL 73

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDIMQS-----IPILGFLTF--------TVVYFM 124
           +  L ++    + A  +      +  L I+       +  L ++T         TV+ FM
Sbjct: 74  VCFLLSYPLGMILASMKLKKNAYIVTLFILPMWMNFLLRTLTWMTLLEGKGVINTVLEFM 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           +L    +I    A +  +  + +  M   +Y +L  I  ++   +R       Q F  + 
Sbjct: 134 HLPTLNIINTNSAIVLGMVYNFLPFMILPIYNALNRIDENVINAARDLGAGTVQTFLRIT 193

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P SMPG++  + M           S M+     ++    IG+ I     +     +   
Sbjct: 194 LPLSMPGILSGITMVFIPALTTFAISTMLGGSKILL----IGNIIEQEFTQLYDWHLGSG 249

Query: 245 MLTMLGVIFLYDQLL 259
           +  +L +  + + ++
Sbjct: 250 LSIVLMIFIILNMII 264


>gi|282933085|ref|ZP_06338474.1| multiple sugar-binding transport system permease protein MsmF
           [Lactobacillus jensenii 208-1]
 gi|281302781|gb|EFA94994.1| multiple sugar-binding transport system permease protein MsmF
           [Lactobacillus jensenii 208-1]
          Length = 170

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%)

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +   G  +GA +A IF +    +          L +IP +++E +     +  Q FW
Sbjct: 22  FLTDSILGNQVGAIIAVIFVMLWQGIAMPVIIFLAGLQSIPDEIKEAAAMDGANNTQIFW 81

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+ +P +    +M++  G+        +  G        IG  I     + +    
Sbjct: 82  KIELPYLLPSISMVFIMALKAGFTAFDQIFALTSGGPTDATTSIGLLIYNYAFKNNQYGY 141

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A+  +L V+     +L
Sbjct: 142 ANAIALVLFVVIALISIL 159



 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 4/132 (3%)

Query: 446 LNPNLWLSLLMIFGTQWY-ILFNVI---AGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L   +   + +IF   W  I   VI   AG  + P++ KE A+       + +  I LP 
Sbjct: 28  LGNQVGAIIAVIFVMLWQGIAMPVIIFLAGLQSIPDEIKEAAAMDGANNTQIFWKIELPY 87

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + P      I A    + A       + G     TT +G  I     K +       + +
Sbjct: 88  LLPSISMVFIMALKAGFTAFDQIFALTSGGPTDATTSIGLLIYNYAFKNNQYGYANAIAL 147

Query: 562 MCCFVLALNRFL 573
           +   V+AL   L
Sbjct: 148 VLFVVIALISIL 159


>gi|153810114|ref|ZP_01962782.1| hypothetical protein RUMOBE_00495 [Ruminococcus obeum ATCC 29174]
 gi|149834292|gb|EDM89372.1| hypothetical protein RUMOBE_00495 [Ruminococcus obeum ATCC 29174]
          Length = 216

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLT 117
             + +       +SL+        AA        K  +L  V+    + +  IP + +  
Sbjct: 1   MPSLINTFIMTALSLVIAAPLGIFAAIYLVEYAKKGNKLVQVIRITAETLSGIPSIVYGL 60

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F +++F+      +     A    I    +  +  +  ++L  +P    E S        
Sbjct: 61  FGMLFFVTALHWGMSLLAGACTLVIMVLPL--IMRTAEEALKAVPDSYREASFGLGAGKL 118

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           +  + + +P ++PG++  +++++ 
Sbjct: 119 RTIFTIVLPSAVPGILAGIILAIG 142



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           ++    ++  ++ +I  P+GI+              +   I+  A+ L+  P+ V+    
Sbjct: 3   SLINTFIMTALSLVIAAPLGIFAAIYLVEYAKKGNKLVQVIRITAETLSGIPSIVY---G 59

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSFHITGWR 492
           +  + ++    +  +SLL    T   ++  +I         A P+ ++E +        R
Sbjct: 60  LFGMLFFVTALHWGMSLLAGACTLVIMVLPLIMRTAEEALKAVPDSYREASFGLGAGKLR 119

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-TGLGAYIA-----ES 546
               I+LP   P  + G I A G     +      S     +    G G  +A      S
Sbjct: 120 TIFTIVLPSAVPGILAGIILAIGRIIGETAALLYTSGTVAQVPNLMGSGRTLALHMYVLS 179

Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572
           +E     +     +++  FVL +N  
Sbjct: 180 SEGLHMNQASATAVVILLFVLIINGL 205


>gi|153806122|ref|ZP_01958790.1| hypothetical protein BACCAC_00377 [Bacteroides caccae ATCC 43185]
 gi|149130799|gb|EDM22005.1| hypothetical protein BACCAC_00377 [Bacteroides caccae ATCC 43185]
          Length = 167

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 4/129 (3%)

Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189
            V   E A IF +  + +  M + +Y +L  +     E ++    +  Q F    +P SM
Sbjct: 28  SVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPLQVFLKAVLPLSM 87

Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249
           PG++  +MM           +E++ + +  +     G+ I   I            L ML
Sbjct: 88  PGVMSGIMMVFMPTISTFAIAELLTMNNIKLF----GTTIQENINNSMWNYGAALSLIML 143

Query: 250 GVIFLYDQL 258
            +I      
Sbjct: 144 LLIAATSLF 152


>gi|111075043|gb|ABH04889.1| ABC-type phosphate transporter permease component pstC
           [Heliobacillus mobilis]
          Length = 320

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 75/207 (36%), Gaps = 7/207 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           ++   L +    + +    +T          PI+      L    + + +  + A+VIS+
Sbjct: 54  IILIFLFLFKEALPVLFDAKTAASLTASKWYPISQPPVFGLIPLIAGSLIVTVGAIVISV 113

Query: 81  LFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFM----NLYPGKVIGA 134
                 A   +   S  +  +L P ++++  IP +    F + +      +L+       
Sbjct: 114 PLGVGAAIYLSMVASPMVREILKPTIEVLAGIPSVVLGFFGMAFLAPVVKSLFNLPTGLT 173

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L     +    +  +T     ++ ++P    E + S   + WQ    + VP +  G+  
Sbjct: 174 ALTGAITLALMALPTITSISEDAISSVPGKYMEAALSLGATRWQAIITVIVPAAFSGITA 233

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIP 221
           ++M+ +       +   M+     +IP
Sbjct: 234 SVMLGIGRAIGETMTVLMVTGNAGIIP 260



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAA 427
             +   V  +I L   ++   V  I+I+  + +   I++     P +   ++P  ++LA 
Sbjct: 85  PISQPPVFGLIPLIAGSLIVTVGAIVISVPLGVGAAIYLSMVASPMVREILKPTIEVLAG 144

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P+ V          P+V S  +       L  ++ +       I        S+ P  +
Sbjct: 145 IPSVVLGFFGMAFLAPVVKSLFNLPTGLTALTGAITLALMALPTITSISEDAISSVPGKY 204

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            E A S   T W+    +I+P  F       +   G A   ++   + + 
Sbjct: 205 MEAALSLGATRWQAIITVIVPAAFSGITASVMLGIGRAIGETMTVLMVTG 254


>gi|150402275|ref|YP_001329569.1| phosphate ABC transporter inner membrane subunit PstA
           [Methanococcus maripaludis C7]
 gi|150033305|gb|ABR65418.1| phosphate ABC transporter, inner membrane subunit PstA
           [Methanococcus maripaludis C7]
          Length = 288

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +F ++ +V + GI  I +        P +++       D   +      T   ++ ++++
Sbjct: 29  LFTIVGYVFINGIGAINMAFFFGDANPINVILGSERCFD--GIWNSILGTLALVVLSILL 86

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+ F  + A    +      +   I    D +  +P + F  F     +      ++   
Sbjct: 87  SIPFGVLGAIYLHEYASDNKITQAIRFSSDSLAGLPSIVFGIFGYALAIKTVGPSLLIGG 146

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L   F +       +  +  + L  +   L E S +   + WQ    + +P ++P ++  
Sbjct: 147 LTLSFMVLPI----IMRATEEGLKAVAPGLREGSLALGATKWQTITKVVIPSALPQMITG 202

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
           ++++M        A+ M     T     G+
Sbjct: 203 IILAMGRS-AEETAAIMFTAATTFSFGLGL 231



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP------ANVFFPLVVS 439
           ++   + L++++ ++ IP G+      H  +      Q +           ++ F +   
Sbjct: 72  SILGTLALVVLSILLSIPFGVLGAIYLHEYASDNKITQAIRFSSDSLAGLPSIVFGIFGY 131

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
            ++   + P+L +  L +      I+      G  A     +E + +   T W+    ++
Sbjct: 132 ALAIKTVGPSLLIGGLTLSFMVLPIIMRATEEGLKAVAPGLREGSLALGATKWQTITKVV 191

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           +P   P  +TG I A G    ++  +    +      + GLG +
Sbjct: 192 IPSALPQMITGIILAMG---RSAEETAAIMFTAATTFSFGLGLF 232


>gi|257466776|ref|ZP_05631087.1| ABC transporter permease protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917924|ref|ZP_07914164.1| D-methionine binding transporter [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691799|gb|EFS28634.1| D-methionine binding transporter [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 216

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQSIPI 112
           L   +  T   +  + V +LL  F +  L   ++        +   VL   ++I++S P 
Sbjct: 6   LWTSSLETLYMVFFSTVFALLLGFPFGILLVITKENGLWEHPKFHQVLETSINILRSFP- 64

Query: 113 LGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
             F+   +V F ++           AAI  +       +   +  +L  +   L E S S
Sbjct: 65  --FIILMIVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIEGALLEVDSGLIEASES 122

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231
              S W     + +P +   L+  + +++      ++    +        L  +   I  
Sbjct: 123 MGASNWTIIRKVMIPEATSSLINGITITI----ISLIGYSSMAGAIGAGGLGDL--AIRY 176

Query: 232 AIKEQDLLAILYAMLTMLGVI 252
             +   +  + YA++ +L ++
Sbjct: 177 GYQRFQIDLMCYAIVILLIIV 197



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 10/142 (7%)

Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFF 434
              T++ V    + A ++  P GI +           P     ++    +L +FP  +  
Sbjct: 10  SLETLYMVFFSTVFALLLGFPFGILLVITKENGLWEHPKFHQVLETSINILRSFPFIILM 69

Query: 435 PLVVSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            ++     V       +    + +  GT  ++   +        +   E + S   + W 
Sbjct: 70  IVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIEGALLEVDSGLIEASESMGASNWT 129

Query: 493 WWRYIILPGIFPYYVTGAITAC 514
             R +++P      + G     
Sbjct: 130 IIRKVMIPEATSSLINGITITI 151


>gi|268679000|ref|YP_003303431.1| binding-protein-dependent transporters inner membrane component
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268617031|gb|ACZ11396.1| binding-protein-dependent transport systems inner membrane
           component [Sulfurospirillum deleyianum DSM 6946]
          Length = 226

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 16/206 (7%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPI 112
           L      T    L + +++ L  F  A +   +        R    +L   +++++S P 
Sbjct: 19  LIDAVIETLTMSLVSTLLATLIGFALAIVLIVTDKNGISPHRYTYKILDVAINMLRSFP- 77

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   +        GK  G   A I  +       +   +  +   + R + E ++SF
Sbjct: 78  FIILIIVLFPVTKFLVGKHTGTF-AMIVPLTIGTAPFIARMIEGAFKEVDRSVIEAAKSF 136

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             S  Q  + + +P + P ++  + +S+     F   +  +  G         G Y    
Sbjct: 137 GTSKVQIIFRVLLPEAFPSIISAITLSLIIIIGFSAMAGTVGGGGLGAVAMNYGYY---- 192

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQL 258
               D   I + +  ++ ++ ++  L
Sbjct: 193 --RFDGTYIFWTVFILIVLVQIFQSL 216



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 61/187 (32%), Gaps = 10/187 (5%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+   +V  ++A++I   + I         I    +    +     +L +FP  +   ++
Sbjct: 26  TLTMSLVSTLLATLIGFALAIVLIVTDKNGISPHRYTYKILDVAINMLRSFPFIILIIVL 85

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
                           + + +  GT  +I   +            E A SF  +  +   
Sbjct: 86  FPVTKFLVGKHTGTFAMIVPLTIGTAPFIARMIEGAFKEVDRSVIEAAKSFGTSKVQIIF 145

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP  FP  ++    +       S ++     G +       G Y  + T       +
Sbjct: 146 RVLLPEAFPSIISAITLSLIIIIGFSAMAGTVGGGGLGAVAMNYGYYRFDGTYIFWTVFI 205

Query: 556 VLGVLIM 562
           ++ ++ +
Sbjct: 206 LIVLVQI 212


>gi|327475172|gb|AEA77181.1| PstA [Bacillus sp. 15.4]
          Length = 294

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V+++ +I  +            +   + +  D   +      T   ML    +++ 
Sbjct: 32  LFGLVVLVTLIYRVASDSVGWIDFGFLSGKLSVNPDKAGILGAILGTVWLMLVVAPVTMF 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      AK  +L  ++   +  +  +P + F    +  F+ +     I   LA 
Sbjct: 92  LGVGTAIYLEEYAKEGKLKSIIQTNISNLAGVPSVVFGILGLTVFVRMADLGNI--VLAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  ++L  +P+ L E S     + WQ    + +P ++PG++  +++
Sbjct: 150 GLTMSLLVLPIVVVASQEALRAVPQFLREASYGMGATKWQTVKNIVLPTAIPGILTGVIL 209

Query: 199 SMSGG 203
           ++S  
Sbjct: 210 ALSRA 214



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 86/254 (33%), Gaps = 24/254 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIG------IAWQSIGYIVNHFTY-QDVLYVIWLGCITMFRV 390
            +  ++L I +  VV    I       + W   G++    +   D   ++     T++ +
Sbjct: 23  AKTVFLLSILFGLVVLVTLIYRVASDSVGWIDFGFLSGKLSVNPDKAGILGAILGTVWLM 82

Query: 391 VVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447
           +V+  +   + +   I++        + S IQ     LA  P+ VF  L ++        
Sbjct: 83  LVVAPVTMFLGVGTAIYLEEYAKEGKLKSIIQTNISNLAGVPSVVFGILGLTVFVRMADL 142

Query: 448 PNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
            N+ L+  L M       ++        A P   +E +     T W+  + I+LP   P 
Sbjct: 143 GNIVLAGGLTMSLLVLPIVVVASQEALRAVPQFLREASYGMGATKWQTVKNIVLPTAIPG 202

Query: 506 YVTGAITACGGAWN------------ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            +TG I A   A                I      +    +    +  +  +S     + 
Sbjct: 203 ILTGVILALSRAIGETAPLVVIGIPALLIPLPEGVFDKFTVMPMQIYYWTVDSALTDEYA 262

Query: 554 EVVLGVLIMCCFVL 567
            +    +++   VL
Sbjct: 263 YLAAATIVVLLIVL 276


>gi|298675651|ref|YP_003727401.1| binding-protein-dependent transporter inner membrane subunit
           [Methanohalobium evestigatum Z-7303]
 gi|298288639|gb|ADI74605.1| binding-protein-dependent transport systems inner membrane
           component [Methanohalobium evestigatum Z-7303]
          Length = 275

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 9/205 (4%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSIPILGFLT 117
            S+ +    +      A ++S +     A L A+    G  ++  ILDI   +P      
Sbjct: 58  SSVLEAIFLSLYSGFLATLLSFILGVPTAYLLARKDFAGKRIIESILDIPVVVPHTVAGI 117

Query: 118 FTVVYFMNLY--------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
             +  F              +   A    + A+       +T S  +   ++   LE  +
Sbjct: 118 ALLTIFGANGLIGDPLESIVRFRDAMAGTVVAMLFVSAPYLTNSAREGFQSVDPRLENAA 177

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           RS     W+ F ++  P +   L+   +M  +       A  M+     V P      + 
Sbjct: 178 RSLGAPLWKAFLFVTFPLASRHLLTGSIMCWARAISEFGAVIMLAYYPMVGPTLIYERFT 237

Query: 230 ALAIKEQDLLAILYAMLTMLGVIFL 254
           ++ + E   +A+L  ++T+   + L
Sbjct: 238 SMGLSESRPIAVLLILVTLTIFVIL 262



 Score = 38.8 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 81/238 (34%), Gaps = 13/238 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403
           L I  F V   ++  I  Q +              V+    ++++   +  +++ I+ +P
Sbjct: 25  LSILLFFVFITLSNMILQQIVTDFSGLIEAVRDSSVLEAIFLSLYSGFLATLLSFILGVP 84

Query: 404 VGIWIGFRPHIS-SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL------- 455
               +  +       I+    +    P  V    +++      L  +   S++       
Sbjct: 85  TAYLLARKDFAGKRIIESILDIPVVVPHTVAGIALLTIFGANGLIGDPLESIVRFRDAMA 144

Query: 456 -----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                M+F +  Y+  +   G  +     +  A S     W+ + ++  P    + +TG+
Sbjct: 145 GTVVAMLFVSAPYLTNSAREGFQSVDPRLENAARSLGAPLWKAFLFVTFPLASRHLLTGS 204

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568
           I     A +      + ++  +   T     + +    +     V+L ++ +  FV+ 
Sbjct: 205 IMCWARAISEFGAVIMLAYYPMVGPTLIYERFTSMGLSESRPIAVLLILVTLTIFVIL 262


>gi|218548375|ref|YP_002382166.1| putrescine ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218355916|emb|CAQ88531.1| putrescine transporter subunit: membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|324112662|gb|EGC06638.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496798|gb|EGC94657.1| putrescine transporter subunit: membrane component of ABC
           superfamily [Escherichia fergusonii ECD227]
          Length = 317

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 86/237 (36%), Gaps = 20/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     + ++  ++ + + +T D      Y  ++      + +  LL  +  A   A S
Sbjct: 69  LMEWADGQLSITLNLGNFLQLTDDPLYFDAY-LQSLQVAAISTICCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++      P  ++   LA 
Sbjct: 128 KPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  + V  M   +Y +L  I   L E +        + F+ + VP +  G++   M+
Sbjct: 188 YIGIVYAYVPFMVLPIYTALIRIDYSLVEAAMDLGARPLKTFFTVIVPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V  E++   D+++    IG  +           +  A+  ++ ++ + 
Sbjct: 248 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300


>gi|218261100|ref|ZP_03476053.1| hypothetical protein PRABACTJOHN_01717 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224224|gb|EEC96874.1| hypothetical protein PRABACTJOHN_01717 [Parabacteroides johnsonii
           DSM 18315]
          Length = 266

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 88/244 (36%), Gaps = 21/244 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            LA  +V+ ++ I+L+   +        +     +   ++      +    +   +  L+
Sbjct: 22  FLAVFVVMPLLLIVLYAFTDADGAFTFANFRKFMVHPEAM-NTFIYSIGIAIITTLACLI 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL----- 136
             +  A + ++ R          +  +++ +L  L   V   +       +   L     
Sbjct: 81  LGYPAAYILSQER---------FNTSRTMVVLFILPMWVNILIRTLATVALFDFLNLPLG 131

Query: 137 --AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A +F +  + +  M + +Y +L  + R L E ++    + +Q F    +P SMPG++ 
Sbjct: 132 EGALVFGMVYNFLPFMIYPIYNTLQKMDRSLIEAAQDLGANPFQVFMKTILPLSMPGVMS 191

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            ++M           +E++ + +  +     G+ +   I            L ML +I +
Sbjct: 192 GIVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENIYNGMWNYGAALSLIMLLLIGV 247

Query: 255 YDQL 258
               
Sbjct: 248 TILF 251


>gi|75910908|ref|YP_325204.1| Sulfate ABC transporter permease CysW [Anabaena variabilis ATCC
           29413]
 gi|75704633|gb|ABA24309.1| Sulfate ABC transporter, permease protein CysW [Anabaena variabilis
           ATCC 29413]
          Length = 291

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 18/198 (9%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDI--------VDIVPITLDVHSLPQYASRTTLRMLSA 75
               ++  + I    + +     ++        V      L        A  T L  L A
Sbjct: 26  WVPTILIFVAIAYLALIQYIPAINVFVQAFSKGVGPFLENLTHSDFLSAARLTVLLALIA 85

Query: 76  MVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIG 133
           + ++ +F    A   A+ +     +++ I+D+  SI P++  L   ++Y  N + G ++ 
Sbjct: 86  VPLNTVFGLCAAWAIARHKFPGRALVLSIIDLPFSISPVVAGLMLVLLYGRNGWFGPLLE 145

Query: 134 AELAAIFAIFTSQVWNMTF--SMYQSLCNIP------RDLEEVSRSFRLSGWQKFWYLGV 185
           A    I   F   V    F    + +   IP      +D EE +++   + WQ FW + +
Sbjct: 146 ANDIRIIFAFPGMVLATAFVSMPFVAREVIPVLEEFGKDQEEAAKTLGANEWQTFWRVTL 205

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P    GL++ ++++ +  
Sbjct: 206 PGIRWGLLYGVILTNARA 223



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++   Q+ S++  I  F  +  +A+     +I   V  F+     ++  L          
Sbjct: 17  KVKPPQKKSWVPTILIFVAIAYLALIQYIPAINVFVQAFSKGVGPFLENLTHSDFLSAAR 76

Query: 393 LIIIASIIWIPVGIWIGFRPHIS---------SKIQPFAQLLAAFPAN-VFFPLVVSCVS 442
           L ++ ++I +P+    G     +         + +     L  +         LV+    
Sbjct: 77  LTVLLALIAVPLNTVFGLCAAWAIARHKFPGRALVLSIIDLPFSISPVVAGLMLVLLYGR 136

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVI------AGASAFP------NDFKEVASSFHITG 490
                P L  + + I      ++                P       D +E A +     
Sbjct: 137 NGWFGPLLEANDIRIIFAFPGMVLATAFVSMPFVAREVIPVLEEFGKDQEEAAKTLGANE 196

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           W+ +  + LPGI    + G I     A      +     G+I  +T  L  ++ ++ 
Sbjct: 197 WQTFWRVTLPGIRWGLLYGVILTNARA-MGEFGAVSVVSGNIANKTQSLPLFVEDAY 252


>gi|312891832|ref|ZP_07751338.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
 gi|311295666|gb|EFQ72829.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Mucilaginibacter paludis DSM 18603]
          Length = 281

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 21  DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80
            L+ F LV  + +++  G    +                 LP     T L  +   +++ 
Sbjct: 19  GLVCFFLVAILWDLISKGAPSLSWAFISTSPTDGMTRGGILPAIIG-TLLLTIITALVAA 77

Query: 81  LFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137
            F    A      A    L  ++   +  +  +P + +  F +  F+     ++  + +A
Sbjct: 78  PFGICCAIYLNEYAADSWLTRIIRASIRNLAGVPSIIYGLFGLALFVQGL--QMGTSLVA 135

Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197
           A   +    +  +  +  ++L  +P  + E + +   + ++    + +P ++PG++  ++
Sbjct: 136 AGLTLGLLSLPYIIITTEEALRRVPNRMREAALAVGATQFESIRDVVLPSAVPGMLTGLV 195

Query: 198 MSMSGG 203
           +++S  
Sbjct: 196 LTLSRA 201



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 15/193 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT------MFRVVVL 393
           + +   +    +VC   + I W  I       ++  +      G         +   ++L
Sbjct: 9   IEWGTLLLSTGLVCFFLVAILWDLISKGAPSLSWAFISTSPTDGMTRGGILPAIIGTLLL 68

Query: 394 IIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYY 444
            II +++  P GI              ++  I+   + LA  P+ ++  F L +      
Sbjct: 69  TIITALVAAPFGICCAIYLNEYAADSWLTRIIRASIRNLAGVPSIIYGLFGLALFVQGLQ 128

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
                +   L +   +  YI+          PN  +E A +   T +   R ++LP   P
Sbjct: 129 MGTSLVAAGLTLGLLSLPYIIITTEEALRRVPNRMREAALAVGATQFESIRDVVLPSAVP 188

Query: 505 YYVTGAITACGGA 517
             +TG +     A
Sbjct: 189 GMLTGLVLTLSRA 201


>gi|158336099|ref|YP_001517273.1| sugar ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158306340|gb|ABW27957.1| sugar ABC transporter, permease protein [Acaryochloris marina
           MBIC11017]
          Length = 285

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 81/210 (38%), Gaps = 8/210 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
           L       Y   ++L  +++ ++ L      A   A+ R  G  +     I+ ++ I+  
Sbjct: 68  LSRRPFASYLFNSSLVAITSTLLCLGIGSPAAYALARLRLPGEQI-----ILSAVLIVTL 122

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSF 172
             + +++   L   +V+      +  I      N+  ++         +PRDLE+ ++  
Sbjct: 123 FPYILLFLGLLEIVQVLHLANNYLALIIPYTAINLPLTILVMRSFFQQLPRDLEDAAKVD 182

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             +  Q  W + +P ++P LV   +++    W   + +   +  +++  +P   + I  +
Sbjct: 183 GYNTVQMLWQIVLPTTLPALVTTGILAFIFAWNEFIFALTFITRESMKTIPVAAAQIGGS 242

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262
              +     + A   +  +  +   L F+ 
Sbjct: 243 SIFEIPYGPIAAATVLGTIPLVLLVLFFQR 272



 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 12/146 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           +    +   ++   I  P    +        +I     +L+A      FP ++  +    
Sbjct: 80  SSLVAITSTLLCLGIGSPAAYALARLRLPGEQI-----ILSAVLIVTLFPYILLFLGLLE 134

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-------SAFPNDFKEVASSFHITGWRWWRYII 498
           +   L L+   +     Y   N+              P D ++ A        +    I+
Sbjct: 135 IVQVLHLANNYLALIIPYTAINLPLTILVMRSFFQQLPRDLEDAAKVDGYNTVQMLWQIV 194

Query: 499 LPGIFPYYVTGAITACGGAWNASIVS 524
           LP   P  VT  I A   AWN  I +
Sbjct: 195 LPTTLPALVTTGILAFIFAWNEFIFA 220


>gi|154492771|ref|ZP_02032397.1| hypothetical protein PARMER_02410 [Parabacteroides merdae ATCC
           43184]
 gi|154087076|gb|EDN86121.1| hypothetical protein PARMER_02410 [Parabacteroides merdae ATCC
           43184]
          Length = 266

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 88/244 (36%), Gaps = 21/244 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            LA  +V+ ++ I+L+   +        +     +   ++      +    +   +  L+
Sbjct: 22  FLAVFVVMPLLLIVLYAFTDADGAFTFANFRKFMVHPEAM-NTFVYSIGIAIITTLACLI 80

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL----- 136
             +  A + ++ R          +  +++ +L  L   V   +       +   L     
Sbjct: 81  LGYPAAYILSQER---------FNTSRTMVVLFILPMWVNILIRTLATVALFDFLNLPLG 131

Query: 137 --AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A +F +  + +  M + +Y +L  + R L E ++    + +Q F    +P SMPG++ 
Sbjct: 132 EGALVFGMVYNFLPFMIYPIYNTLQKMDRSLIEAAQDLGANPFQVFMKTILPLSMPGVMS 191

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            ++M           +E++ + +  +     G+ +   I            L ML +I +
Sbjct: 192 GIVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENIYNGMWNYGAALSLIMLLLIGV 247

Query: 255 YDQL 258
               
Sbjct: 248 TILF 251


>gi|148559657|ref|YP_001259938.1| phosphate ABC transporter permease PstA [Brucella ovis ATCC 25840]
 gi|148370914|gb|ABQ60893.1| phosphate ABC transporter, permease protein PstA [Brucella ovis
           ATCC 25840]
          Length = 436

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 52/139 (37%), Gaps = 4/139 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ML  + +SL      +      A+  R   ++   ++ + ++P + F    +   +
Sbjct: 221 SLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNINNLAAVPSIVFGLLGLAVLI 280

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
           N + G    A L     +    +  +  +   +L  +P  +         S  Q  ++  
Sbjct: 281 NFF-GLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSIRSAVLGLGASKTQMVFHHV 339

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ ++  
Sbjct: 340 LPLAAPGILTGTIIGLAHA 358



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 6/158 (3%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFA 422
           +     +  +   +      +++ +++++ ++  I +   I++     +   +  I+   
Sbjct: 201 FTFGASSRPETSGLGVALVGSLYMMLIVLGLSLPIGVAASIYLEEFARKNRFTDMIEVNI 260

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
             LAA P+ VF  L ++ +  +   P   +L   L++   T   I+    A   A P   
Sbjct: 261 NNLAAVPSIVFGLLGLAVLINFFGLPRSASLVGGLVLTLMTLPTIIIATRAALRAVPPSI 320

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           +        +  +   + +LP   P  +TG I     A
Sbjct: 321 RSAVLGLGASKTQMVFHHVLPLAAPGILTGTIIGLAHA 358


>gi|146341213|ref|YP_001206261.1| D-and L-methionine ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146194019|emb|CAL78036.1| D-and L-methionine ABC transporter, permease protein
           [Bradyrhizobium sp. ORS278]
          Length = 221

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP--------ILDIMQSIPI 112
           + Q    +   + +A +++           A SR   +   P        +++  +S P 
Sbjct: 9   IVQATGESLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVVNATRSTP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L  G  IG+  AAI  +  +    +   +  ++  +   L E + SF
Sbjct: 68  FIILVVAIIPFTRLVAGTSIGSG-AAIVPLTVAATPFIARLVEAAIREVDAGLIETASSF 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q  + + +P ++PGLV  + +++
Sbjct: 127 GATPLQIVFKVLIPEALPGLVLALTLAV 154



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           ++F V    ++A+ + +P+G+++           P +++ +        + P  +    +
Sbjct: 16  SLFMVSTAALVATALGLPLGVFLATSRTGELFAAPAVNAALGVVVNATRSTPFIILVVAI 75

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     V+   +     +  L +  T + I   V A          E ASSF  T  +  
Sbjct: 76  IPFTRLVAGTSIGSGAAIVPLTVAATPF-IARLVEAAIREVDAGLIETASSFGATPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITAC 514
             +++P   P  V     A 
Sbjct: 135 FKVLIPEALPGLVLALTLAV 154


>gi|320526959|ref|ZP_08028148.1| putative spermidine/putrescine transport system permease protein
           PotC [Solobacterium moorei F0204]
 gi|320132544|gb|EFW25085.1| putative spermidine/putrescine transport system permease protein
           PotC [Solobacterium moorei F0204]
          Length = 271

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 5/162 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115
            +  S+ +    T L  + A +IS L   + A   +KS+R+   L      + ++P+L  
Sbjct: 53  FNNRSILEAIYYTVLCAVLATLISTLIGTITAIGLSKSKRITREL---FQQVNNLPMLNP 109

Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRL 174
              T +  M  +    I      +     +     +  S+   L  I +++ E +     
Sbjct: 110 EIVTAIGLMLFFTSLRIQTGFTTMLLAHIAFCTPYVILSVLPRLRRIDKNMAEAALDLGC 169

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + WQ  W + +P    G++   +++ S  +   V S M   G
Sbjct: 170 TPWQAMWKVIIPQIKGGIIAGALVAFSMSFDDFVIS-MFTTG 210



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 51/143 (35%), Gaps = 2/143 (1%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437
            ++     T+   V+  +I+++I     I +     I+ ++      L      +   + 
Sbjct: 57  SILEAIYYTVLCAVLATLISTLIGTITAIGLSKSKRITRELFQQVNNLPMLNPEIVTAIG 116

Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQ--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +            + ++L+        Y++ +V+        +  E A     T W+   
Sbjct: 117 LMLFFTSLRIQTGFTTMLLAHIAFCTPYVILSVLPRLRRIDKNMAEAALDLGCTPWQAMW 176

Query: 496 YIILPGIFPYYVTGAITACGGAW 518
            +I+P I    + GA+ A   ++
Sbjct: 177 KVIIPQIKGGIIAGALVAFSMSF 199


>gi|283835260|ref|ZP_06355001.1| hypothetical protein CIT292_09568 [Citrobacter youngae ATCC 29220]
 gi|291068972|gb|EFE07081.1| hypothetical protein CIT292_09568 [Citrobacter youngae ATCC 29220]
          Length = 217

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ +L   L  +++I +SI
Sbjct: 7   WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRTLSALVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRMIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPTGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPLQIVRKVLLPEALPGLVNAATITL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 48/176 (27%), Gaps = 12/176 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRTLSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRMIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPTGLIEASRAMGATPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           R ++LP   P  V  A          S +      G +       G     +T   
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMN 190


>gi|291456037|ref|ZP_06595427.1| putative ABC-type sugar transport system, permease component
           [Bifidobacterium breve DSM 20213]
 gi|291382446|gb|EFE89964.1| putative ABC-type sugar transport system, permease component
           [Bifidobacterium breve DSM 20213]
          Length = 324

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 5/188 (2%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFA 422
              IV+ FT+Q+ +Y  WL    ++ VV  +  ++I+    G  I          +    
Sbjct: 95  FQNIVDTFTFQEGVYTRWLLNSILYAVVAGLG-STILAAFAGYAIATMRFPGRNMLLWIT 153

Query: 423 QLLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
            +  + P+ V   PL +       +N  L + +       + +   +I   ++ P    E
Sbjct: 154 LIFMSIPSTVITVPLFLMYAKIGLVNTPLAVII-PQLSNPFGLYLMIIYAQTSIPQSLVE 212

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLG 540
            A       W  +  +  P + P +VT  + A    W N  +   + S    +  T GL 
Sbjct: 213 AARLDGANTWTIFWKVAFPLLSPGFVTVLLFALVSVWNNYFLPLIMLSNTDDYPLTVGLN 272

Query: 541 AYIAESTE 548
            ++  +++
Sbjct: 273 VWLKMASD 280



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 5/144 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVV 121
           ++   + L  + A + S +         A  R     +L+ I  I  SIP       TV 
Sbjct: 111 RWLLNSILYAVVAGLGSTILAAFAGYAIATMRFPGRNMLLWITLIFMSIPSTV---ITVP 167

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+      ++   LA I    ++  + +   +  +  +IP+ L E +R    + W  FW
Sbjct: 168 LFLMYAKIGLVNTPLAVIIPQLSNP-FGLYLMIIYAQTSIPQSLVEAARLDGANTWTIFW 226

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWF 205
            +  P   PG V  ++ ++   W 
Sbjct: 227 KVAFPLLSPGFVTVLLFALVSVWN 250


>gi|222100313|ref|YP_002534881.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Thermotoga neapolitana DSM 4359]
 gi|221572703|gb|ACM23515.1| Binding-protein-dependent transport systems inner membrane
           component precursor [Thermotoga neapolitana DSM 4359]
          Length = 265

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 13/243 (5%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---------PQYASRTTLRM 72
           +++   +  +  I+L  +  ++   D   I P +L +  L          +    +    
Sbjct: 13  IVSLWFLTPVFFIVLASLTPSSDYYDPHRIFPSSLTLDHLYKLFVTLGGGKATLTSIQVA 72

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKV 131
           L ++ IS L          +    G   + +  +M +SIP++      VV +M L     
Sbjct: 73  LVSIGISFLLGLPAGYALTRYVFPGKNAIRLSMLMTRSIPLIVVAVPLVVLYMRLNLADT 132

Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
                 A  ++    V  +T S++  +     + EE    F LS +Q F  + +P ++PG
Sbjct: 133 TLGVALAHASMILPFVVLITSSVFSGISV---EYEEAGMVFGLSRFQAFLRITLPLALPG 189

Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251
           L  + + +    W  V AS ++ + +  +P   + + +A     +     + A+  M+ +
Sbjct: 190 LAASAIFAFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGTIMAIPAMVFI 249

Query: 252 IFL 254
            F+
Sbjct: 250 FFI 252



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 82/241 (34%), Gaps = 9/241 (3%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLI 394
           + L   +F V+  +     +     I       D LY +++          ++   +V I
Sbjct: 17  WFLTPVFFIVLASLTPSSDYYDPHRIFPSSLTLDHLYKLFVTLGGGKATLTSIQVALVSI 76

Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFPANVF-FPLVVSCVSYYHLNPNLWL 452
            I+ ++ +P G  +             + L+  + P  V   PLVV  +     +  L +
Sbjct: 77  GISFLLGLPAGYALTRYVFPGKNAIRLSMLMTRSIPLIVVAVPLVVLYMRLNLADTTLGV 136

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
           +L        +++    +  S    +++E    F ++ ++ +  I LP   P     AI 
Sbjct: 137 ALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFLRITLPLALPGLAASAIF 196

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   +WN    S + +  +  L    L   +A           ++ +  M          
Sbjct: 197 AFIMSWNEVFASSILTLTNRTLPAHILNTAMASPDYFKFAAGTIMAIPAMVFIFFIRKYL 256

Query: 573 L 573
           +
Sbjct: 257 V 257


>gi|153941355|ref|YP_001389926.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum F str. Langeland]
 gi|152937251|gb|ABS42749.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum F str. Langeland]
 gi|295318009|gb|ADF98386.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum F str. 230613]
          Length = 320

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 65/160 (40%), Gaps = 17/160 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-----QSIPILGFLTFT 119
             +T +  +S  +  L+  + +A    +S +    ++ +L I+       +    ++   
Sbjct: 100 LIKTLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILL 159

Query: 120 ---------VVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                    ++ F  ++ P +++  + A    +    +  M   +Y S+  +     E +
Sbjct: 160 KTEGVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAA 219

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFV 207
                S ++ F  + +P ++PG++   M+    + G+FF+
Sbjct: 220 NDLGASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFI 259



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-----AAFPANVFFPLV--- 437
           T+   +   +   II  P   +IG        I     +L     +      +  L+   
Sbjct: 103 TLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILLKTE 162

Query: 438 ------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSF 486
                 +      H    +  +   +F    YI+   +              + E A+  
Sbjct: 163 GVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAANDL 222

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             + ++ ++ I LP   P  + G +           +S++       L +  +
Sbjct: 223 GASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFISDLMGGSKTMLISNLI 275


>gi|160901862|ref|YP_001567443.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
 gi|160359506|gb|ABX31120.1| binding-protein-dependent transport systems inner membrane
           component [Petrotoga mobilis SJ95]
          Length = 269

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 91/246 (36%), Gaps = 14/246 (5%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRMLSAMVI 78
             F L++  + ILL       V + I  + P  L        +      T    L A +I
Sbjct: 5   AWFELILSFLGILLLFFIAAPVAKLIFGVEPKVLIDTVKEEEVYSSILLTFSASLVATLI 64

Query: 79  SLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYFMN---------LYP 128
           S+L     A L A+    G   +  ++DI   IP        +  F +         ++ 
Sbjct: 65  SILLGVPLAYLLARKDFFGKSFVESLIDIPVIIPHTAAGIALLTVFGSRFFLGRFFSIFG 124

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
            + +G     + A+    +  +   + +   +I   LE+V+RS   S  + F+ + +P +
Sbjct: 125 IEFVGEFAGIVVAMMFVSMPFLVNEVKEGFRSIDVKLEKVARSLGSSPARTFFRVSLPLN 184

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248
              L+   +M  + G     A  ++        +     + +  +K    +A +  + ++
Sbjct: 185 FNHLISGSLMMWARGLSEFGAVIILAYHPMTASVLIYERFTSFGLKYSSPVAAIMVITSL 244

Query: 249 LGVIFL 254
           +  IFL
Sbjct: 245 IVFIFL 250



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 81/244 (33%), Gaps = 19/244 (7%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S++  +  F +   VA  I       +++    ++V   I L   T    +V  +I+ +
Sbjct: 11  LSFLGILLLFFIAAPVAKLIFGVEPKVLIDTVKEEEVYSSILL---TFSASLVATLISIL 67

Query: 400 IWIPVGIWIGFRPHISS-KIQPFAQLLAAFPANV-------------FFPLVVSCVSYYH 445
           + +P+   +  +       ++    +    P                F     S      
Sbjct: 68  LGVPLAYLLARKDFFGKSFVESLIDIPVIIPHTAAGIALLTVFGSRFFLGRFFSIFGIEF 127

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +     + + M+F +  +++  V  G  +     ++VA S   +  R +  + LP  F +
Sbjct: 128 VGEFAGIVVAMMFVSMPFLVNEVKEGFRSIDVKLEKVARSLGSSPARTFFRVSLPLNFNH 187

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            ++G++     A   S    V    +  +  + L      S        V   ++I    
Sbjct: 188 LISGSLMM--WARGLSEFGAVIILAYHPMTASVLIYERFTSFGLKYSSPVAAIMVITSLI 245

Query: 566 VLAL 569
           V   
Sbjct: 246 VFIF 249


>gi|160897225|ref|YP_001562807.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|160362809|gb|ABX34422.1| binding-protein-dependent transport systems inner membrane
           component [Delftia acidovorans SPH-1]
 gi|222833017|gb|EEE71494.1| predicted protein [Populus trichocarpa]
          Length = 220

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 76/204 (37%), Gaps = 16/204 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFT 119
           T + +  +  I+L      A L           S R    L  +++  ++ P +  L   
Sbjct: 19  TLMMVGVSGGIALAAGIPLAVLLIVTAPGGFLASPRTHRALGSVINGFRATPFIVLL-VA 77

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           ++ F  L  G  IG   AAI  +  S        +  SL  +   L E +++     W  
Sbjct: 78  LIPFTRLVTGTTIGV-WAAIVPLAISATPFFARIVEVSLREVDPGLIEAAQAMGCRKWDI 136

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
             ++ +P ++PG+V    +++      +++S  +        L  +   I    +  D  
Sbjct: 137 VRHVYLPEALPGIVGGFTITL----VALISSSAMAGAVGAGGLGDL--AIRYGYQRFDTQ 190

Query: 240 AILYAMLTMLGVIFLYDQLLFRPM 263
            +L  +  ++ ++ +   L  R +
Sbjct: 191 VMLLVIAVLIALVTVVQVLGDRYV 214



 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 18/198 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T+  V V   IA    IP+ + +           P     +        A P  V    +
Sbjct: 19  TLMMVGVSGGIALAAGIPLAVLLIVTAPGGFLASPRTHRALGSVINGFRATPFIVLLVAL 78

Query: 438 VS---CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     V+   +     +  L I  T ++    V            E A +     W   
Sbjct: 79  IPFTRLVTGTTIGVWAAIVPLAISATPFFARI-VEVSLREVDPGLIEAAQAMGCRKWDIV 137

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
           R++ LP   P  V G          A I S   +          L   I    ++     
Sbjct: 138 RHVYLPEALPGIVGGFTITL----VALISSSAMAGAVGAGGLGDL--AIRYGYQRFDTQV 191

Query: 555 VVLGVLIMCCFVLALNRF 572
           ++L + ++   V  +   
Sbjct: 192 MLLVIAVLIALVTVVQVL 209


>gi|27262380|gb|AAN87471.1| phosphate transport system permease protein PstC [Heliobacillus
           mobilis]
          Length = 321

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 75/207 (36%), Gaps = 7/207 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80
           ++   L +    + +    +T          PI+      L    + + +  + A+VIS+
Sbjct: 55  IILIFLFLFKEALPVLFDAKTAASLTASKWYPISQPPVFGLIPLIAGSLIVTVGAIVISV 114

Query: 81  LFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFM----NLYPGKVIGA 134
                 A   +   S  +  +L P ++++  IP +    F + +      +L+       
Sbjct: 115 PLGVGAAIYLSMVASPMVREILKPTIEVLAGIPSVVLGFFGMAFLAPVVKSLFNLPTGLT 174

Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
            L     +    +  +T     ++ ++P    E + S   + WQ    + VP +  G+  
Sbjct: 175 ALTGAITLALMALPTITSISEDAISSVPGKYMEAALSLGATRWQAIITVIVPAAFSGITA 234

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIP 221
           ++M+ +       +   M+     +IP
Sbjct: 235 SVMLGIGRAIGETMTVLMVTGNAGIIP 261



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--RPHISSKIQPFAQLLAA 427
             +   V  +I L   ++   V  I+I+  + +   I++     P +   ++P  ++LA 
Sbjct: 86  PISQPPVFGLIPLIAGSLIVTVGAIVISVPLGVGAAIYLSMVASPMVREILKPTIEVLAG 145

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P+ V          P+V S  +       L  ++ +       I        S+ P  +
Sbjct: 146 IPSVVLGFFGMAFLAPVVKSLFNLPTGLTALTGAITLALMALPTITSISEDAISSVPGKY 205

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
            E A S   T W+    +I+P  F       +   G A   ++   + + 
Sbjct: 206 MEAALSLGATRWQAIITVIVPAAFSGITASVMLGIGRAIGETMTVLMVTG 255


>gi|99082829|ref|YP_614983.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99039109|gb|ABF65721.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 541

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 47/215 (21%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTF----- 118
            RT +  L+  V  ++  +  A + A   SR   ++++           L  L F     
Sbjct: 322 LRTMIMSLAITVSCIVLGYPVAWILANLPSRTANVLMI-----------LVLLPFWTSLL 370

Query: 119 ------------------TVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQS 157
                              +V+   +       +I  +   I A+    +  M   MY  
Sbjct: 371 VRTSAWKVMLQQQGVINDVLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSV 430

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  I       ++S   + W  FW +  P S+PG+    ++       + +  E++    
Sbjct: 431 MQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTK 490

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
                   G +I+  I      ++ + +   LG I
Sbjct: 491 --------GVFISNRIAFHISQSLNWGLAAALGTI 517



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 37/120 (30%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N      + M      +++  + +        +   A S   T 
Sbjct: 390 LVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSLGATN 449

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  +  P   P    G+I     A    I  E+         +  +  +I++S   G
Sbjct: 450 WTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNWG 509


>gi|257054147|ref|YP_003131979.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256584019|gb|ACU95152.1| ABC-type proline/glycine betaine transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 215

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 9/196 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435
              +     + +  VV   IIA+++ + +GI +   P  S+     A  +   P+     
Sbjct: 11  WERLSLQAFLHVSEVVQSTIIAAVLGVGIGIAVYRSPVGSAVATALASTVLTIPSFALLG 70

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L++  V        + L L  +      I  N I G ++      + A    ++      
Sbjct: 71  LLIPVVGLGATPTVIALVLYALL----PITRNTIVGLASVDPAVTDAAKGIGMSRLGVLT 126

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASW-GHIHLRTTGLGAYIAESTEKGSFPE 554
            + L   +P  + G   A       ++++  A   G      +GL      +    +  +
Sbjct: 127 RVELRLAWPAILAGMRVATQMLMGIAVIAAYAKGPGLGSEVFSGL----TRAGSANATNQ 182

Query: 555 VVLGVLIMCCFVLALN 570
            + G L +    L L 
Sbjct: 183 ALAGTLGVVILALLLE 198



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 15/202 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
              L   A      ++ + +I+ +          +S     V   +   + +IP    L 
Sbjct: 11  WERLSLQAFLHVSEVVQSTIIAAVLGVGIGIAVYRSPVGSAVATALASTVLTIPSFALL- 69

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
                   L P   +GA    I  +  + +  +T +    L ++   + + ++   +S  
Sbjct: 70  ------GLLIPVVGLGATPTVIALVLYALL-PITRNTIVGLASVDPAVTDAAKGIGMSRL 122

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237
                + +  + P ++  M ++             I V       PG+GS +   +    
Sbjct: 123 GVLTRVELRLAWPAILAGMRVATQMLM-------GIAVIAAYAKGPGLGSEVFSGLTRAG 175

Query: 238 LLAILYAMLTMLGVIFLYDQLL 259
                   L     + +   LL
Sbjct: 176 SANATNQALAGTLGVVILALLL 197


>gi|325068276|ref|ZP_08126949.1| putative proline/glycine/betaine/choline ABC transporter permease
           [Actinomyces oris K20]
          Length = 226

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
              ++ YI +   +   + +  L    +   +  ++IA++I +P G W+G      + +Q
Sbjct: 4   VLAALAYIADPAHWSGAMGIGPLLVQHVLYSLAGVLIAALIGVPAGWWVGHTGRGRTWVQ 63

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P +    + P      L    +      P +   +L        +L   ++G  A     
Sbjct: 64  PLSGTARSLPTLGLITLFGLVLGVGLSAPMIAFVIL----ALPSVLAGAMSGVRAASAMA 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            + A +  ++  +    + +P   P  V G  +A     + + ++     G       GL
Sbjct: 120 VDGARASGMSELQVLGRVEIPLGAPLLVGGLRSASLQVISTATLAAYTGAG-------GL 172

Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
           G  +    +   +  ++   L++    LA     
Sbjct: 173 GRLMFLGLKTQDYVMMLSSALLVISLALASEAIF 206



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 15/190 (7%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  L  L+ ++I+ L           + R    + P+    +S+P LG +T   +   
Sbjct: 27  LVQHVLYSLAGVLIAALIGVPAGWWVGHTGRGRTWVQPLSGTARSLPTLGLITLFGLVLG 86

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +I   + A+ ++    +          +        + +R+  +S  Q    + 
Sbjct: 87  VGLSAPMIAFVILALPSVLAGAM--------SGVRAASAMAVDGARASGMSELQVLGRVE 138

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244
           +P   P LV  +    S     +  + +           G+G  + L +K QD + +L +
Sbjct: 139 IPLGAPLLVGGLR---SASLQVISTATLAA----YTGAGGLGRLMFLGLKTQDYVMMLSS 191

Query: 245 MLTMLGVIFL 254
            L ++ +   
Sbjct: 192 ALLVISLALA 201


>gi|11498954|ref|NP_070187.1| phosphate ABC transporter, permease protein (pstA) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649217|gb|AAB89888.1| phosphate ABC transporter, permease protein (pstA) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 283

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 76/211 (36%), Gaps = 10/211 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMVIS 79
           L     V G++ +              +D+  +T      P+ A    + +  + A+ + 
Sbjct: 14  LALAATVFGVVVLAALLAYTFVEAAAWLDLQFLTSPPSRFPEKAGIFPSLVGSIMAIALV 73

Query: 80  LLFTFVYATLAA-------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
            +        AA       +   L  ++   +  + ++P + +    +  F++   G   
Sbjct: 74  GVMVLPLGVGAAIYLEEYARKNWLTKLIEINISNLAAVPSIVYGLLGLGLFVSTL-GLKP 132

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
           G  L     +    +  +  +  +SL  +P  L E S +   + WQ    + +P S+PG+
Sbjct: 133 GIVLVGSLTLTLLVLPIVIVAAQESLRAVPFSLREASLAVGATKWQTVKSVVLPSSLPGI 192

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
           +  +++++S          MI V       P
Sbjct: 193 MTGVILALSRAIGETAPLIMIGVATATFTAP 223



 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 75/212 (35%), Gaps = 9/212 (4%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVV 392
           L +     + + +    +        AW  + ++ +  + + +   +      ++  + +
Sbjct: 13  LLALAATVFGVVVLAALLAYTFVEAAAWLDLQFLTSPPSRFPEKAGIFPSLVGSIMAIAL 72

Query: 393 LIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449
           + ++   + +   I++     +  ++  I+     LAA P+ V+  L+   +    L   
Sbjct: 73  VGVMVLPLGVGAAIYLEEYARKNWLTKLIEINISNLAAVPSIVY-GLLGLGLFVSTLGLK 131

Query: 450 LWLSLLMIFGTQWYILFNVIAGA----SAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
             + L+        +L  VI  A     A P   +E + +   T W+  + ++LP   P 
Sbjct: 132 PGIVLVGSLTLTLLVLPIVIVAAQESLRAVPFSLREASLAVGATKWQTVKSVVLPSSLPG 191

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +TG I A   A   +    +           
Sbjct: 192 IMTGVILALSRAIGETAPLIMIGVATATFTAP 223


>gi|39933209|ref|NP_945485.1| sulfonate ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|39652834|emb|CAE25576.1| ABC sulfonate transport system, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 257

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 19/204 (9%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG---------- 383
           +  + RVS+   +    ++  +A+  A   +   +      D    +W            
Sbjct: 1   MRGSARVSWAWSLVGIALL--LALWEAGHRLYGPLVLPGLGDTALTLWRMIRAGQVGPAL 58

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
             T     +  II  +I    G+  G R      +QP A +L   PA  +  L +     
Sbjct: 59  LETAGNAGLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGG 118

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  W  ++ +      +LF     G  +  +    +A  + +        +  P +
Sbjct: 119 R------WAVVVTVAAATGPMLFAAALEGVRSLDSTLARMAQVYQVPLSARLTEVYGPQL 172

Query: 503 FPYYVTGAITACGGAWNASIVSEV 526
             +     +T    +W  ++++E+
Sbjct: 173 LSHLFPALVTTLAMSWKVAVMAEL 196



 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 66/201 (32%), Gaps = 17/201 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY------ASRTTLRM 72
                  ++ I ++  L         P  +  +    L +  + +          T    
Sbjct: 6   RVSWAWSLVGIALLLALWEAGHRLYGPLVLPGLGDTALTLWRMIRAGQVGPALLETAGNA 65

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
               +I +L       LA         L P+  I+  +P + ++   +++F   +   V 
Sbjct: 66  GLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRWAVVVT 125

Query: 133 GAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191
            A               M F+   + + ++   L  +++ +++    +   +  P  +  
Sbjct: 126 VAAATG----------PMLFAAALEGVRSLDSTLARMAQVYQVPLSARLTEVYGPQLLSH 175

Query: 192 LVWNMMMSMSGGWFFVVASEM 212
           L   ++ +++  W   V +E+
Sbjct: 176 LFPALVTTLAMSWKVAVMAEL 196


>gi|259907571|ref|YP_002647927.1| DL-methionine transporter permease subunit [Erwinia pyrifoliae
           Ep1/96]
 gi|224963193|emb|CAX54677.1| D-methionine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283477413|emb|CAY73329.1| Methionine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 217

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQS 109
           +  L +    T +    +     +       L           + RL  VL   ++I +S
Sbjct: 6   LWLLGRGVWETLMMTFVSGFFGFVIGLPVGVLLYVTRPGQIVANARLYRVLSAAVNIFRS 65

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           IP    L   ++ F  +  G  IG + AAI  +       +   +  +L  +P  L E S
Sbjct: 66  IP-FIILLVWMIPFTRIIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLELPSGLIEAS 123

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           R+   +  Q    + +P ++PGLV    +++
Sbjct: 124 RAMGATPLQIIRKVLLPEALPGLVNAATITL 154



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLMMTFVSGFFGFVIGLPVGVLLYVTRPGQIVANARLYRVLSAAVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E + +   T  +  
Sbjct: 76  IPFTRIIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLELPSGLIEASRAMGATPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R ++LP   P  V  A          S +      G +       G     +T
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|167767693|ref|ZP_02439746.1| hypothetical protein CLOSS21_02228 [Clostridium sp. SS2/1]
 gi|317499125|ref|ZP_07957403.1| phosphate ABC transporter [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710710|gb|EDS21289.1| hypothetical protein CLOSS21_02228 [Clostridium sp. SS2/1]
 gi|291560826|emb|CBL39626.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [butyrate-producing bacterium SSC/2]
 gi|316893594|gb|EFV15798.1| phosphate ABC transporter [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 300

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           ++ L+   ++  +  +    +         ++     L   S         +  L   V+
Sbjct: 37  LWLLVNVAMIATVAVLAYLIVYILVNGVPYLNSQLFELKYTSENASVFPAIINTLIMTVL 96

Query: 79  SLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           SL+        AA        +  +L  V+    + +  IP + +  F +++F+      
Sbjct: 97  SLVLAVPLGIFAAIYLVEYAKRGNKLVEVVRLTAETLSGIPSIVYGLFGMLFFVKALGWG 156

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +     AA  AI    +  +  +  ++L ++P    E S        +  + + +P ++P
Sbjct: 157 LCLLSGAATMAIMILPL--IMRTTEEALKSVPDSFREGSFGLGAGKLRTVFCIILPSAVP 214

Query: 191 GLVWNMMMSMS 201
           G++  +++ + 
Sbjct: 215 GILSGVILGIG 225



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405
           I    V+  + + I    + Y+ +                 +   +++ +++ ++ +P+G
Sbjct: 46  IATVAVLAYLIVYILVNGVPYLNSQLFELKYTSENASVFPAIINTLIMTVLSLVLAVPLG 105

Query: 406 IWIGFR--------PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLL 455
           I+              +   ++  A+ L+  P+ V+  F ++    +       L  +  
Sbjct: 106 IFAAIYLVEYAKRGNKLVEVVRLTAETLSGIPSIVYGLFGMLFFVKALGWGLCLLSGAAT 165

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           M       I+        + P+ F+E +        R    IILP   P  ++G I   G
Sbjct: 166 MAIMILPLIMRTTEEALKSVPDSFREGSFGLGAGKLRTVFCIILPSAVPGILSGVILGIG 225


>gi|149187433|ref|ZP_01865731.1| phosphate ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838969|gb|EDL55908.1| phosphate ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 287

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 10/204 (4%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLH----GIQETTVPRDIVDIVPITLDVHSL 61
           +     ++    N F   A  L +G +  ++        +      I D    T D H +
Sbjct: 6   LKKARQNKDAVLNAFVWAAAALTVGFLFWIIWYILSNGLQHVSWSFITDNYTRTGDEHGI 65

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLT 117
                 T   +++++ ++     + A    +  ++G  LV ++      +  IP + F  
Sbjct: 66  FPMIVSTIYMVIASIAVAAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSIIFGL 125

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F + +F+ +          A   +I    V  +  +  ++L  +P+   E S +   S  
Sbjct: 126 FGMTFFVVILGFGFSILSGALTLSILILPV--IIRTTEEALMAVPQTYREGSYALGSSKI 183

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
              W L +P +MPG++ ++++S+ 
Sbjct: 184 YTIWRLILPSAMPGILTSVILSIG 207



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 24/193 (12%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ----------DVLYVIWLGCITMFRVVV 392
                   +  G    I W  +   + H ++           D   +  +   T++ V+ 
Sbjct: 19  AFVWAAAALTVGFLFWIIWYILSNGLQHVSWSFITDNYTRTGDEHGIFPMIVSTIYMVIA 78

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVF------FPLVVSCVS 442
            I +A+ + I   I++     + SK+    +     LA  P+ +F      F +V+    
Sbjct: 79  SIAVAAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSIIFGLFGMTFFVVILGFG 138

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
           +  L+  L LS+L++      I+        A P  ++E + +   +       +ILP  
Sbjct: 139 FSILSGALTLSILILPV----IIRTTEEALMAVPQTYREGSYALGSSKIYTIWRLILPSA 194

Query: 503 FPYYVTGAITACG 515
            P  +T  I + G
Sbjct: 195 MPGILTSVILSIG 207


>gi|116333284|ref|YP_794811.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116098631|gb|ABJ63780.1| ABC-type phosphate transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 294

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++ AM+IS       A      AK   +   +   ++I+ S+P +    F  +
Sbjct: 62  LFNSFYLLILAMLISFPIALGAAIYLYEYAKDNWVTTTIRTAIEILSSLPSVVVGLFGFL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+     ++  + L+  FA+    +  +T S+  SL  I     E   +  LS W+   
Sbjct: 122 FFVVKL--RLGFSILSGAFALTFFNLPLLTRSIEDSLRTISDVQREGGLALGLSRWETVT 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            + +P ++P ++  +++S  
Sbjct: 180 RVILPAAVPSILTGVILSAG 199



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 59/153 (38%), Gaps = 15/153 (9%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF 433
             V      + + +++ ++I+  I +   I++        +++ I+   ++L++ P+   
Sbjct: 56  GGVGVQLFNSFYLLILAMLISFPIALGAAIYLYEYAKDNWVTTTIRTAIEILSSLPS--- 112

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS-------F 486
             +VV    +      L L   ++ G      FN+     +  +  + ++          
Sbjct: 113 --VVVGLFGFLFFVVKLRLGFSILSGAFALTFFNLPLLTRSIEDSLRTISDVQREGGLAL 170

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            ++ W     +ILP   P  +TG I + G  + 
Sbjct: 171 GLSRWETVTRVILPAAVPSILTGVILSAGRVFG 203


>gi|297243000|ref|ZP_06926938.1| ABC-type phosphate transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296889211|gb|EFH27945.1| ABC-type phosphate transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 350

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 8/148 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYA-TLAAKSR--RLGMVLVPILDIMQSIPIL-- 113
             +      T    L AMVIS+    + A  L   SR  ++  ++  ++D+M  IP +  
Sbjct: 113 GGILHAIIGTLEITLGAMVISIPIGLMCAVYLVEYSRGNKISRIINLLVDVMSGIPSIVA 172

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
           G   F++  F+   PG + G E +   A+    +  +  S  + L  +P DL E S +  
Sbjct: 173 GLFAFSMFAFLA-GPGTINGFEGSV--ALSLLMIPTVVKSSQEMLKIVPNDLREASLALG 229

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           ++  +    + +  ++PG+V   +++++
Sbjct: 230 VTQQRTITKIVLRTALPGIVSGCILAVA 257



 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 28/220 (12%)

Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378
                R H      +    + + ++  +     +  + +      I  +   F   ++ Y
Sbjct: 41  KFRPTRSHIAARKRKDMLMRVLIFLSFVVALIPLISLLLTTIINGIKRLNFDFLTHNMTY 100

Query: 379 VIWL------GCITMFRVVVLIII----ASIIWIPVGIWIGFR-------PHISSKIQPF 421
           V+        G   +   ++  +     A +I IP+G+              IS  I   
Sbjct: 101 VVGGNATGTGGYGGILHAIIGTLEITLGAMVISIPIGLMCAVYLVEYSRGNKISRIINLL 160

Query: 422 AQLLAAFPANV-------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
             +++  P+ V        F  +    +      ++ LSLLMI      ++ +       
Sbjct: 161 VDVMSGIPSIVAGLFAFSMFAFLAGPGTINGFEGSVALSLLMIPT----VVKSSQEMLKI 216

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
            PND +E + +  +T  R    I+L    P  V+G I A 
Sbjct: 217 VPNDLREASLALGVTQQRTITKIVLRTALPGIVSGCILAV 256


>gi|270262538|ref|ZP_06190809.1| transporter [Serratia odorifera 4Rx13]
 gi|270043222|gb|EFA16315.1| transporter [Serratia odorifera 4Rx13]
          Length = 742

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 73/473 (15%), Positives = 144/473 (30%), Gaps = 55/473 (11%)

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGWQKFW 181
              + PG+ +   L  I+         + F +   +   +   LEE S++ R + W+ F 
Sbjct: 294 LFGIEPGRWL-YGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRANRWRTFR 352

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           Y+ +P   PGL    ++S          + M++ G   +    I   +  A  +      
Sbjct: 353 YVSLPLMAPGLANAFLISFIES-MADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPSR--- 408

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
             A+L ++ + F     + + + +    F      G                  R + Y 
Sbjct: 409 -AAVLAIILLCFTLSAFVLQRLWLAGKSFATVTGKGDSG---------MHCGLPRGLRYG 458

Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361
            +    P                F      + L      S+ LD          A G  W
Sbjct: 459 VYGLVIPWG-------------LFTLVVYGMILIGGFVQSWGLDNSLTLAHYTRAFGFQW 505

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421
                +     +            T+   ++   + +I+ +     I  +     +   F
Sbjct: 506 SGGQILWTGVAWNSFWT-------TLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEF 558

Query: 422 AQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS------- 473
             +L+ A P  V   + VS +  Y+L P       +I    + +  N+  G         
Sbjct: 559 MLMLSFAIPGTV---IGVSYIMAYNLPPLEITGTALILVACF-VFRNMPVGVRGGIAAMS 614

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
                  E + +     +R  R +ILP + P      + A   A  +            +
Sbjct: 615 QLDRSLDEASLTLRAGSFRTLRKVILPLLKPAISAALVYAFVRAITSISAVIFLVSAQYN 674

Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
           + T+    YI    E G +    + +      ++ +   +     L G R LR
Sbjct: 675 MATS----YIVGLVENGEYG---VAIAYSSVLIVVMLAVILTFQLLVGERRLR 720


>gi|222081915|ref|YP_002541280.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221726594|gb|ACM29683.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 214

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 80/197 (40%), Gaps = 15/197 (7%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           ++ +L+ +     LA KS      ++ +  ++ +IP L          + L     I   
Sbjct: 28  VIAALILSLPLGWLAHKSGLFKSAILGVAGLLYTIPSLALF-----VLLPLVLHTKILDP 82

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L  + A+    +  +  ++   L  +P D  + + +      Q+F+ + +P ++P +   
Sbjct: 83  LNVVVALTVYSLALLVRTVSDGLGAVPPDTLQAATAMGYRSLQRFFLVELPIAVPVIAAG 142

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++       +V++  IV    +I  P +G      ++ + +  ++  ++  L +  + 
Sbjct: 143 LRVA-------LVSNVSIVSVAALIGTPQLGLLFTQGLQLRFVTPLIAGIVLCLLLAVVL 195

Query: 256 D---QLLFRPMIVWSNK 269
           D    LL R +  W  +
Sbjct: 196 DGLVILLNRWLTPWRPR 212



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 1/144 (0%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           V+ +I A I+ +P+G          S I   A LL   P+   F L+   +    L+P  
Sbjct: 25  VIPVIAALILSLPLGWLAHKSGLFKSAILGVAGLLYTIPSLALFVLLPLVLHTKILDPLN 84

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
            +  L ++ +   ++  V  G  A P D  + A++      + +  + LP   P    G 
Sbjct: 85  VVVALTVY-SLALLVRTVSDGLGAVPPDTLQAATAMGYRSLQRFFLVELPIAVPVIAAGL 143

Query: 511 ITACGGAWNASIVSEVASWGHIHL 534
             A     +   V+ +     + L
Sbjct: 144 RVALVSNVSIVSVAALIGTPQLGL 167


>gi|116252935|ref|YP_768773.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257583|emb|CAK08680.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 564

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 74/499 (14%), Positives = 151/499 (30%), Gaps = 50/499 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
              ++V+ +  + L  +    +       V   L   SL      T +  +   VISL+ 
Sbjct: 18  FVVIIVLILSVLPLARLAMVGIAAFADGGVMTVLSEASLWSATYYTVVTAILGTVISLVI 77

Query: 83  TFVYATLAAKSRRLGMVLVPILDIMQ-----SIPILGFL-------TFTVVYFMNLYPGK 130
             ++A L   +      L+    ++       +  L ++              +    G 
Sbjct: 78  GCLFAFLLTLTDIRAKGLLSFFFVLPMMIPPQVTALAWVQMSGPSSPLLKALHIAPPLGS 137

Query: 131 VIGAELAAIFAIFTSQ--VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                     A+         +  ++   L  +PRD  E +R    S  + F  + +P S
Sbjct: 138 PQPLYSVGGIALLYGVQHAPLVYLALRAGLMTLPRDGVEAARLSGASSLRVFRDIILPLS 197

Query: 189 MPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
           +PG++    +S     G F + A   I      +P      + A   +    +A+L A++
Sbjct: 198 LPGIIAGAAISFVSCTGNFGIPAILGIPPSIFTLPTLIFTKFSAFTSRTFGDVAVLSAII 257

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            ++ V+ L  Q                    +   D  V+ L   +       +      
Sbjct: 258 AIISVVGLMIQ-----------------DRALRGRDYRVIGLSGASAAFELGAWRLVFTS 300

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
              +     L      +          +    +   +           V       S+  
Sbjct: 301 LVWAILFFMLAAPFFALVAGALVPAYGVPLTFKTMSLHAFEEILFRQAVTRTAFINSLSL 360

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
                    V+ V+    +T  +  +  I++S+I IP  +     P I   +       A
Sbjct: 361 AGATALCLLVVTVLAAYTLTRRKDSISRIVSSLIEIPYSL-----PGIVMAVCFILVFAA 415

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVASS 485
             P           + +  L   +W+ L+  F + + + L  V++         +E A  
Sbjct: 416 PIP-----------ILHVSLYGTIWIILIAYFSSFFAVSLKPVVSAFHQLDPALEEAARL 464

Query: 486 FHITGWRWWRYIILPGIFP 504
                +R    II+P I P
Sbjct: 465 SGAGFFRRLADIIVPLIAP 483


>gi|310778529|ref|YP_003966862.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
 gi|309747852|gb|ADO82514.1| binding-protein-dependent transport systems inner membrane
           component [Ilyobacter polytropus DSM 2926]
          Length = 275

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 26/212 (12%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGM------VLVPIL--DIMQSIPILGFLTF 118
           RT    L   VIS++     A   ++S++          + P+L   +++S     ++T 
Sbjct: 59  RTLKIALITAVISMILGTPVAYFISRSKKSLRGIFIACTVFPLLTNSVVRS---FAWMTI 115

Query: 119 T----------VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168
                      +   +   P K++  E A I       +  M  S+   + NI  DL E 
Sbjct: 116 LGKNGVFNNIFMALHLVDKPVKLLYTEFAIIIGSVYLFLPLMVVSLVGVMENIEDDLLEA 175

Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228
           + S   + +  F+ +  P SMPGL+   ++  +G +      +++     ++    + + 
Sbjct: 176 AESLGANKFTAFFKVIFPLSMPGLIVGSVLVFTGAFTAYTTPQLLGGNQNMV----LATL 231

Query: 229 I-ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           +   A+   D          M+        ++
Sbjct: 232 VYQRAMTLGDWTGASVVATVMIITTLTVIGII 263



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 28/210 (13%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISS------KIQPFA--QLLAAFPANVFFPLV 437
           T+   ++  +I+ I+  PV  +I               + P     ++ +F    +  ++
Sbjct: 60  TLKIALITAVISMILGTPVAYFISRSKKSLRGIFIACTVFPLLTNSVVRSF---AWMTIL 116

Query: 438 --------VSCVSYYHLNPN--LWLSLLMIFGTQW---YILFNVIAGAS-AFPNDFKEVA 483
                   +    +    P   L+    +I G+ +    ++   + G      +D  E A
Sbjct: 117 GKNGVFNNIFMALHLVDKPVKLLYTEFAIIIGSVYLFLPLMVVSLVGVMENIEDDLLEAA 176

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543
            S     +  +  +I P   P  + G++    GA+ A    ++       +  T +    
Sbjct: 177 ESLGANKFTAFFKVIFPLSMPGLIVGSVLVFTGAFTAYTTPQLLGGNQNMVLATLV---Y 233

Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             +   G +    +   +M    L +   +
Sbjct: 234 QRAMTLGDWTGASVVATVMIITTLTVIGII 263


>gi|295100175|emb|CBK89264.1| ABC-type spermidine/putrescine transport system, permease component
           II [Eubacterium cylindroides T2-87]
          Length = 268

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 75/201 (37%), Gaps = 10/201 (4%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           +S +        +   +         +     T+ + ++       +++  + + +IA++
Sbjct: 15  LSLLFFYIPILYMIVFSFNSGRSLTNFEGFSLTWYEHMFKNRDMMESLYTTITIALIATL 74

Query: 400 IWIPVGI--WIGFRPHISSKIQPFAQLLAAFPA----NVFFPLVVSCVSYYHLNPNLWLS 453
           +   +G    IG        ++ F   L  FP      V     +     +H+       
Sbjct: 75  VATLLGTISAIGLSKS-RKFLKSFVLQLNDFPIMNPEIVTAIGFMLLFITFHIERGFMTM 133

Query: 454 LL--MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           LL  + F T  Y++ +++    +   +  + A     T W+    +++P I P   +GA+
Sbjct: 134 LLAHIAFCT-PYVILSIMPKIRSLDPNLADAAMDLGATPWQALTKVLVPQIMPGIFSGAL 192

Query: 512 TACGGAWNASIVSEVASWGHI 532
            A   +++  I+S   + G +
Sbjct: 193 IAFTMSFDDFIISYFVTGGGV 213



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 57/155 (36%), Gaps = 2/155 (1%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
              +    ++  +I+ L   +  T++A    +    L   +  +   PI+     T + F
Sbjct: 58  MMESLYTTITIALIATLVATLLGTISAIGLSKSRKFLKSFVLQLNDFPIMNPEIVTAIGF 117

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           M L+    I      +     +     +  S+   + ++  +L + +     + WQ    
Sbjct: 118 MLLFITFHIERGFMTMLLAHIAFCTPYVILSIMPKIRSLDPNLADAAMDLGATPWQALTK 177

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           + VP  MPG+    +++ +  +   + S  +  G 
Sbjct: 178 VLVPQIMPGIFSGALIAFTMSFDDFIISYFVTGGG 212


>gi|288553550|ref|YP_003425485.1| phosphate ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288544710|gb|ADC48593.1| phosphate ABC transporter (permease) [Bacillus pseudofirmus OF4]
          Length = 318

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 62/147 (42%), Gaps = 6/147 (4%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120
           L      + + M  A+ I L+     +  A  S ++   L P+L+I+  IP + +  F  
Sbjct: 95  LTGTIISSVIAMFVAIPIGLMTAIFLSEYA--SDKVRRTLKPMLEILAGIPTIVYGFFAF 152

Query: 121 VYFMNLYPGKVIGAELAAIF---AIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSG 176
            +   +    + G +   I     +    +  M  S+   ++ ++PR + E + +   + 
Sbjct: 153 TFVTPILRDIIPGLQATNILSPGIVMGIMIIPMVASLSEDAMSSVPRAMREGALALGATR 212

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            +    + +P ++ G++ + ++ +S  
Sbjct: 213 LEVTGKVVIPAAISGIIASFVLGISRA 239



 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 76/225 (33%), Gaps = 31/225 (13%)

Query: 390 VVVLIIIASIIWIPVGIWIGF----------RPHISSKIQPFAQLLAAFPANVF------ 433
           ++   II+S+I + V I IG              +   ++P  ++LA  P  V+      
Sbjct: 94  LLTGTIISSVIAMFVAIPIGLMTAIFLSEYASDKVRRTLKPMLEILAGIPTIVYGFFAFT 153

Query: 434 --FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
              P++   +        L   ++M       +        S+ P   +E A +   T  
Sbjct: 154 FVTPILRDIIPGLQATNILSPGIVMGIMIIPMVASLSEDAMSSVPRAMREGALALGATRL 213

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIHLRTTGLGAYIAE 545
                +++P      +   +     A   +++  +AS         I      + AYI E
Sbjct: 214 EVTGKVVIPAAISGIIASFVLGISRAIGETMIVTIASGSTKNFTFDITQSMQTMTAYIVE 273

Query: 546 STE----KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
            T      GS     L  + M  FV     FL + L  Y +R  R
Sbjct: 274 VTGGDAPAGSTIYYSLYAVAMTLFVFT---FLMNLLARYISRRFR 315


>gi|319651559|ref|ZP_08005686.1| phosphate ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317396626|gb|EFV77337.1| phosphate ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 294

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 90/244 (36%), Gaps = 18/244 (7%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASII 400
           + L +    +   +A G+ W ++ +++N  +       IW     T++ ++V+  +  I+
Sbjct: 33  FGLVVLIVLIYRVLADGLGWINMDFLMNRLSTDPERAGIWGAITGTLWLMLVVAPVTMIL 92

Query: 401 WIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LL 455
            +   I++     +  ISS I+     LA  P+ VF  L ++  +      ++ L+  L 
Sbjct: 93  GVGTAIYLEEYAAKGRISSFIKTNISNLAGVPSVVFGILGLTVFARALDLGSVVLAGGLT 152

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           M       ++        A P   +E +     T W+  + ++LP   P  +TG I A  
Sbjct: 153 MALLVLPVVVVASQEAIRAVPQFLREASYGMGATKWQTIKNVVLPAALPGILTGVILALS 212

Query: 516 GAWN------------ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
            A                I      +    +    +  +  +S     +  +    +++ 
Sbjct: 213 RAIGETAPLVVIGIPALLIPVPDGIFDKFTILPVQIYYWTIDSALVAEYANLAAATIVIL 272

Query: 564 CFVL 567
             VL
Sbjct: 273 LIVL 276



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L   V++I +I  +L           +++ +    +   +    + T   ML    ++++
Sbjct: 32  LFGLVVLIVLIYRVLADGLGWINMDFLMNRLSTDPERAGIWGAITGTLWLMLVVAPVTMI 91

Query: 82  FTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A      A   R+   +   +  +  +P + F    +  F       +    LA 
Sbjct: 92  LGVGTAIYLEEYAAKGRISSFIKTNISNLAGVPSVVFGILGLTVFARALD--LGSVVLAG 149

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +  +  +++  +P+ L E S     + WQ    + +P ++PG++  +++
Sbjct: 150 GLTMALLVLPVVVVASQEAIRAVPQFLREASYGMGATKWQTIKNVVLPAALPGILTGVIL 209

Query: 199 SMSGG 203
           ++S  
Sbjct: 210 ALSRA 214


>gi|253689705|ref|YP_003018895.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251756283|gb|ACT14359.1| binding-protein-dependent transport systems inner membrane
           component [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T      +     +       L           + +L   +  +++I +SIP    L  
Sbjct: 15  ETVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTVSALVNIFRSIP-FIILLV 73

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  Q
Sbjct: 74  WMIPFTRVIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPTGLIEAARAMGATPMQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGL+    +++
Sbjct: 133 IIRKILLPEALPGLINAATITL 154



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 49/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      ++ +PVG+         I   P +   +     +  + P     V+ 
Sbjct: 16  TVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTVSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E A +   T  +  
Sbjct: 76  IPFTRVIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPTGLIEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R I+LP   P  +  A          S +      G +       G     +T
Sbjct: 135 RKILLPEALPGLINAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|298528290|ref|ZP_07015694.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511942|gb|EFI35844.1| phosphate ABC transporter, inner membrane subunit PstA
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 285

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           +   +L A  + +         +   R   ++ + I++ +  +P + +  F + +F+   
Sbjct: 73  SLGSILVAFPLGVGTAIYLNEFSGGGRWTRIIRMGIIN-LAGVPSVVYGLFGLAFFVLYL 131

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
              V     +     F   +  +  S  ++L N+P+   E S +   + WQ  + + +P 
Sbjct: 132 NMGVSLLAGSLTLGAFILPL--IIGSAEEALRNVPQSYREASLALGATKWQTVYRMVLPA 189

Query: 188 SMPGLVWNMMMSMSGG 203
           ++P ++  M++ +S  
Sbjct: 190 ALPSMLTGMILGVSRA 205



 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 5/179 (2%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD--VLYVIWLGCITMFRVVVLIIIASII 400
            L +F   +       I+W+ +         +      ++    I++  ++V   +    
Sbjct: 28  ALALFLGFIAINGISAISWEFLTEHPRKSMTEGGIWPCIVGTVYISLGSILVAFPLGVGT 87

Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460
            I +  + G               LA  P+ V+    ++    Y       L+  +  G 
Sbjct: 88  AIYLNEFSGGGRWTRIIRMGIIN-LAGVPSVVYGLFGLAFFVLYLNMGVSLLAGSLTLGA 146

Query: 461 Q--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                I+ +        P  ++E + +   T W+    ++LP   P  +TG I     A
Sbjct: 147 FILPLIIGSAEEALRNVPQSYREASLALGATKWQTVYRMVLPAALPSMLTGMILGVSRA 205


>gi|118593582|ref|ZP_01550959.1| spermidine/putrescine ABC transporter, permease component I protein
           [Stappia aggregata IAM 12614]
 gi|118433800|gb|EAV40460.1| spermidine/putrescine ABC transporter, permease component I protein
           [Stappia aggregata IAM 12614]
          Length = 309

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 25/214 (11%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI-LGFLTFTVVYFM 124
             + +    + +++L+  +  A   A+S      L P L ++  +P    FL     +  
Sbjct: 92  LSSVVIAAISTLLTLIIGYPIAYGMARSP---QSLRPTLLMLVILPFWTSFLIRVYAWIG 148

Query: 125 NL-----------------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
            L                  P  ++   +A    I  S +  +   +Y SL  +   L E
Sbjct: 149 ILKNEGLLNQLLLTLGVINEPLVIMNTNIAVFIGIVYSYLPFLVLPLYASLERLDGSLLE 208

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            +       W+ FW + VP S+PG++    +         V  +++   +T++    IG 
Sbjct: 209 AAEDLGCPPWKAFWKITVPLSLPGVIAGCFLVFIPAVGEFVIPDLLGGSNTLM----IGK 264

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
            + +         +  A+  +L +I +   +LF+
Sbjct: 265 TLWVEFFNNRDWPVSSAVAVILLMILVVPIVLFQ 298



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 44/130 (33%), Gaps = 4/130 (3%)

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           +N N+ + + +++    +++  + A          E A       W+ +  I +P   P 
Sbjct: 173 MNTNIAVFIGIVYSYLPFLVLPLYASLERLDGSLLEAAEDLGCPPWKAFWKITVPLSLPG 232

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565
            + G       A    ++ ++    +  +    +G  +           V   V ++   
Sbjct: 233 VIAGCFLVFIPAVGEFVIPDLLGGSNTLM----IGKTLWVEFFNNRDWPVSSAVAVILLM 288

Query: 566 VLALNRFLWH 575
           +L +   L+ 
Sbjct: 289 ILVVPIVLFQ 298


>gi|332705364|ref|ZP_08425442.1| ABC-type spermidine/putrescine transport system, permease component
           I [Lyngbya majuscula 3L]
 gi|332355724|gb|EGJ35186.1| ABC-type spermidine/putrescine transport system, permease component
           I [Lyngbya majuscula 3L]
          Length = 304

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 14/208 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAK---SRRLGMVLVPILDIMQSIPIL---G 114
           + Q   R+    +   VI LL  F  A   A+    R   ++L+  +  + +  +L    
Sbjct: 84  ILQVIGRSLFLAMGTTVICLLLGFPVAYWIAQLAPKRWQNLLLLGFILPLWTSSLLRSYA 143

Query: 115 FLTF--------TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++T         TV+  + L    ++    A + A+  S +  M   +Y S+  + + L 
Sbjct: 144 WITILRPTGVLNTVLTSLGLPGLDLLNRSAAVLIAMAYSFLPYMVLILYASIEKLDKRLL 203

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +     + +Q FW + VP ++PG+    ++    G    V  E++    ++     I 
Sbjct: 204 EAAADLGANPYQTFWKVTVPQTLPGIAAGSLLVFISGLGDFVNPELLGGASSMTGARLIY 263

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFL 254
           +    A +     + L  ML ++  I +
Sbjct: 264 NQFLGATQNWGFGSALSMMLILVVSIAI 291



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 38/119 (31%)

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
           LN +  + + M +    Y++  + A          E A+      ++ +  + +P   P 
Sbjct: 169 LNRSAAVLIAMAYSFLPYMVLILYASIEKLDKRLLEAAADLGANPYQTFWKVTVPQTLPG 228

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
              G++          +  E+            +      +T+   F   +  +LI+  
Sbjct: 229 IAAGSLLVFISGLGDFVNPELLGGASSMTGARLIYNQFLGATQNWGFGSALSMMLILVV 287


>gi|284931050|gb|ADC30988.1| ABC-type phosphate transport system permease pstC/pstA [Mycoplasma
           gallisepticum str. F]
          Length = 652

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++  +I    HG      P   +     +   +S  +    T + +   ++I+   +  
Sbjct: 372 FILWILIYTFYHGFIAIFSPDQTIT----SFAANSTGRATVNTLVIIFFGILIAFPISLF 427

Query: 86  YATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN----LYPGKVIGAELAA 138
            A      A++ +    ++  +D + S P + F  F + +F+        G+   + +A 
Sbjct: 428 IAIYVNEYARNNKAKTTILFFIDALSSTPSILFGIFGLTFFIQTLWLAIGGRSSNSMIAG 487

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           I  I    +      + Q+L ++P    E S +  +S  Q    + +P
Sbjct: 488 ILTISLVIMPAFIRMLQQALASVPNSTREASYALGISRSQTILKIILP 535



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 65/516 (12%), Positives = 160/516 (31%), Gaps = 43/516 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + FV +   I        E+           +  +   +    S T      +++I+   
Sbjct: 31  ITFVGIFAFIFYKSIPGWESYGKSIFRLDFNLVQNKAGIWAPLSVTLFVTFVSLLIAAPI 90

Query: 83  TFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTV----VYFMNLYPGKVIGAEL 136
               A         +       I++I+  IP + F  F           ++  +     +
Sbjct: 91  GVNTAIFIKFRLKEKWRKTFRIIINILAGIPSVVFGLFAANSLGFLVQAIFDTRTSWNLI 150

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            AI  +    +  +    Y SL ++   +   S +   +  +  + +    +  G+  ++
Sbjct: 151 TAIIMLTFMIIPTIVAMSYNSLDSVDMSILSASIALGTTKTKSIYKIFKKEAKNGIYVSL 210

Query: 197 MMSMSGGWFFVVASEMI-------VVGDTVI------PLPGIGSYIALAIKEQDLLAILY 243
           + + S      +A   I       +VG T         L  IG+ I+     ++    L 
Sbjct: 211 LTAFSRAISESMALNFILTSQNYNIVGHTPFNDFIQSGLKTIGAIISYNFFAENGSENLR 270

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           ++L + G+I     ++   ++++ NK   ++             +  +T     I +   
Sbjct: 271 SVLYLFGIILFIFTIIINILVLFINKSSTKKKYP--------WAIKVETFIANIILFIPN 322

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD-----IFWFCVVCGVAIG 358
                +   +    R+    + H     ++     R +         + +   +      
Sbjct: 323 KISQSIVYLINLNKRSASYFKVHKNAIRVKAYDYWRQTVEFICMTICVGFILWILIYTFY 382

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHIS 415
             + +I       T             T+  +   I+IA  I + + I++          
Sbjct: 383 HGFIAIFSPDQTITSFAANSTGRATVNTLVIIFFGILIAFPISLFIAIYVNEYARNNKAK 442

Query: 416 SKIQPFAQLLAAFPANVFFPL--------VVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           + I  F   L++ P+ +F           +   +     N  +   L +        +  
Sbjct: 443 TTILFFIDALSSTPSILFGIFGLTFFIQTLWLAIGGRSSNSMIAGILTISLVIMPAFIRM 502

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +    ++ PN  +E + +  I+  +    IILP + 
Sbjct: 503 LQQALASVPNSTREASYALGISRSQTILKIILPQVI 538


>gi|227114055|ref|ZP_03827711.1| DL-methionine transporter permease subunit [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 10/142 (7%)

Query: 67  RTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTF 118
            T      +     +       L           + +L   +  +++I +SIP    L  
Sbjct: 15  ETVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTVSALVNIFRSIP-FIILLV 73

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E +R+   +  Q
Sbjct: 74  WMIPFTRIIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPTGLIEAARAMGATPMQ 132

Query: 179 KFWYLGVPFSMPGLVWNMMMSM 200
               + +P ++PGL+    +++
Sbjct: 133 IIRKILLPEALPGLINAATITL 154



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 49/173 (28%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      ++ +PVG+         I   P +   +     +  + P     V+ 
Sbjct: 16  TVAMTFVSGFFGFVLGLPVGVLLYTTRPGQIIANPKLYRTVSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E A +   T  +  
Sbjct: 76  IPFTRIIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPTGLIEAARAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R I+LP   P  +  A          S +      G +       G     +T
Sbjct: 135 RKILLPEALPGLINAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|241202902|ref|YP_002973998.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856792|gb|ACS54459.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 249

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P     +SL   A+     ++ ++V S +   V      +        +   I +  Q+ 
Sbjct: 40  PAVYRQNSLASLAAGHLQLVIGSIVCSAVLAVVGGIFVTRESGADFLPLSRAIANAGQTF 99

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V               +  + A+F   +  +  +    L  +   + + + 
Sbjct: 100 PPVAVLALAVPA--------TGFGAMPTLIALFLYGLLPIFENTVAGLKQVSPQVLDAAD 151

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              ++G Q+   + +P ++P ++  + ++        V +       + +   G+G  I 
Sbjct: 152 GMGMNGTQRLLRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVII 204

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   +   IL   L +  +  L    +
Sbjct: 205 AGLISDNTAFILQGGLIVGLMAVLIYDAM 233



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA----AFPANVF 433
            +  L    +  V+  I+ ++++ +  GI++       +   P ++ +A     FP    
Sbjct: 47  SLASLAAGHLQLVIGSIVCSAVLAVVGGIFV--TRESGADFLPLSRAIANAGQTFPPVAV 104

Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
             L V    +  +   + L L  +      I  N +AG         + A    + G + 
Sbjct: 105 LALAVPATGFGAMPTLIALFLYGLL----PIFENTVAGLKQVSPQVLDAADGMGMNGTQR 160

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
              + LP   P  + G   A       ++++   +     +   GLG  I       +  
Sbjct: 161 LLRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVIIAGLISDNTA 213

Query: 554 EVVLGVLIMCCFVLAL 569
            ++ G LI+    + +
Sbjct: 214 FILQGGLIVGLMAVLI 229


>gi|161504634|ref|YP_001571746.1| DL-methionine transporter permease subunit [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865981|gb|ABX22604.1| hypothetical protein SARI_02755 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T      +     +       L          ++ RL   L  +++I +SI
Sbjct: 7   WLLIRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRALSAVVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E SR
Sbjct: 67  P-FIILLVWMIPFTRVIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLEIPAGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPLQIVRKILLPEALPGLVNAATITL 154



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRALSAVVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRVIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLEIPAGLIEASRAMGATPLQIV 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R I+LP   P  V  A          S +      G +       G     +T
Sbjct: 135 RKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|333025303|ref|ZP_08453367.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
 gi|332745155|gb|EGJ75596.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071]
          Length = 222

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 9/161 (5%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           +++A +I +PV +W+G      +     + +  A P      L+       H      ++
Sbjct: 1   MLVACLIALPVALWLGHLGKGGALAVNISNIGRAIPTLALLALLSLTPLREHGETPTLIA 60

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           L++       +L N   G         E A    ++G + +  + LP  FP  +TG  +A
Sbjct: 61  LVLF--AIPPVLTNAYIGMREADRAVVEAARGMGMSGGQVFLRVELPLAFPLLMTGIRSA 118

Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
                  + ++ +   G       GLG  I       +  +
Sbjct: 119 AVQTVATATLAAIPGGG-------GLGRVITAGFNLQNTSQ 152



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 6/124 (4%)

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           M+++ L     A       + G + V I +I ++I          +  +          E
Sbjct: 1   MLVACLIALPVALWLGHLGKGGALAVNISNIGRAI------PTLALLALLSLTPLREHGE 54

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
              + A+    +  +  + Y  +    R + E +R   +SG Q F  + +P + P L+  
Sbjct: 55  TPTLIALVLFAIPPVLTNAYIGMREADRAVVEAARGMGMSGGQVFLRVELPLAFPLLMTG 114

Query: 196 MMMS 199
           +  +
Sbjct: 115 IRSA 118


>gi|270307591|ref|YP_003329649.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           VS]
 gi|270153483|gb|ACZ61321.1| phosphate ABC transporter, permease protein [Dehalococcoides sp.
           VS]
          Length = 283

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 72/223 (32%), Gaps = 20/223 (8%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS--IIWIPVGIWIGFR-------PHIS 415
           G+  +         +   G I+   V  L ++    +I +PVGI              ++
Sbjct: 42  GFSWDFLFTPPAGGLAGEGGISSTIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLT 101

Query: 416 SKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-VIAGAS 473
             I+   Q LA  P+ +F        V+  H   ++    L +      +L         
Sbjct: 102 RFIRYGVQTLAGVPSILFGLFGFALFVTVLHFRFSILSGALTLACLLLPVLITATEEALK 161

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533
             P  ++  A +   T W+   ++ILP   P   TG I   G A   +    V   G   
Sbjct: 162 TVPRSYRAGAMALGATKWQAVTHVILPAALPGIATGVILCAGRALGETACLYVTMGGSAA 221

Query: 534 LRTTGLG---------AYIAESTEKGSFPEVVLGVLIMCCFVL 567
           +  + L           Y++  T           VLI+    L
Sbjct: 222 MPDSLLSGGRSLALHVFYLSTETNAIDKAMATAAVLIVIIVGL 264



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 69/203 (33%), Gaps = 20/203 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTV 120
           T +  L  + ++LL        AA          RL   +   +  +  +P + F  F  
Sbjct: 65  TIVTTLYLVGLTLLILVPVGIGAAIYLVEYAPDNRLTRFIRYGVQTLAGVPSILFGLFGF 124

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
             F+ +   +      A   A     V  +  +  ++L  +PR     + +   + WQ  
Sbjct: 125 ALFVTVLHFRFSILSGALTLACLLLPV--LITATEEALKTVPRSYRAGAMALGATKWQAV 182

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS----------YIA 230
            ++ +P ++PG+   +++          A   + +G +      + S          Y++
Sbjct: 183 THVILPAALPGIATGVILCAGRA-LGETACLYVTMGGSAAMPDSLLSGGRSLALHVFYLS 241

Query: 231 LAIKEQDLLAILYAMLTMLGVIF 253
                 D      A+L ++ V  
Sbjct: 242 TETNAIDKAMATAAVLIVIIVGL 264


>gi|160934973|ref|ZP_02082359.1| hypothetical protein CLOLEP_03849 [Clostridium leptum DSM 753]
 gi|156866426|gb|EDO59798.1| hypothetical protein CLOLEP_03849 [Clostridium leptum DSM 753]
          Length = 291

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 21/278 (7%)

Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--Y 373
           + ++L   +    +  L++  N      + +    ++  +  G+ + S  ++   ++   
Sbjct: 1   MTKSLYQKKRRPSDLLLKIAINGAALLTVIVLAGIILYILINGLPYISWEFLSTSYSESP 60

Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPA 430
                ++ +   T++ V + ++IA+ I I   I++         ++      ++L+  P+
Sbjct: 61  SGAKGILPMIINTLYIVAITLLIATPIGISSAIYLTQYAKQGRLVRAIRFTTEILSGIPS 120

Query: 431 NVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488
            +F  F   V CV +      L   L M       I+        A P  +KE A +   
Sbjct: 121 ILFGLFGYTVFCVMFRMGTSILAGCLTMTLCILPTIVRTTEESLLAVPGSYKEGAMALGA 180

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----- 543
              R    I+LP   P  +T  I A G     S      S    ++     G  +     
Sbjct: 181 GKLRVILGIVLPCAVPGILTAVILAMGRIVGESAALLYTSGMSYNMPKDFFGQIMNSGRT 240

Query: 544 ---------AESTEKGSFPEVVLGVLIMCCFVLALNRF 572
                     ++T   +F        ++   V  LN  
Sbjct: 241 LTLHLYQTAMQATSDDAFHIAFATAAVLLVIVFLLNLL 278



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 6/200 (3%)

Query: 6   ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-VHSLPQY 64
             P  +  +I  N   LL  +++ GII  +L           +      +      +   
Sbjct: 10  RRPSDLLLKIAINGAALLTVIVLAGIILYILINGLPYISWEFLSTSYSESPSGAKGILPM 69

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              T   +   ++I+       A      AK  RL   +    +I+  IP + F  F   
Sbjct: 70  IINTLYIVAITLLIATPIGISSAIYLTQYAKQGRLVRAIRFTTEILSGIPSILFGLFGYT 129

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F  ++  ++  + LA    +    +  +  +  +SL  +P   +E + +      +   
Sbjct: 130 VFCVMF--RMGTSILAGCLTMTLCILPTIVRTTEESLLAVPGSYKEGAMALGAGKLRVIL 187

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
            + +P ++PG++  ++++M 
Sbjct: 188 GIVLPCAVPGILTAVILAMG 207


>gi|114569031|ref|YP_755711.1| phosphate ABC transporter inner membrane subunit PstA [Maricaulis
           maris MCS10]
 gi|114339493|gb|ABI64773.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Maricaulis maris MCS10]
          Length = 580

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393
               +RVS  L ++   +    AI   + +  +        ++  V      ++  +++ 
Sbjct: 309 PAERRRVSDQLIVWTRALEARGAINAVFNTYLFANADSREPELAGVKGALYGSILTMIIT 368

Query: 394 IIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN- 449
           I+I+  I +   +++     +   ++ I+     LAA P+ VF  L ++        P  
Sbjct: 369 IMISVPIGVFTALYLEEYAPKNRFTALIEVNINNLAAVPSIVFGLLGLAVFINAFGLPRS 428

Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507
             L   L++   T   ++    A   A P   ++ A +   +  +   + +LP   P  +
Sbjct: 429 APLVGGLVLSLMTLPTVIIATRAALQAVPQSIRQAALAVGASRTQTVFHHVLPLAAPGIL 488

Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLG---------------AYIAESTEKGSF 552
           TGAI     A   +    +            LG                  ++  E+   
Sbjct: 489 TGAIIGLAQALGETAPLLMIGMVAFIADAPTLGLEGFTQPATVMPVQIFLWSDGAERAFQ 548

Query: 553 PEVVLGVLIMCCFVLALNRF 572
                 +L++   ++  N  
Sbjct: 549 ARTGAAILVLLALMIGFNAL 568



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 54/132 (40%), Gaps = 1/132 (0%)

Query: 95  RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154
           R   ++   ++ + ++P + F    +  F+N + G    A L     +    +  +  + 
Sbjct: 391 RFTALIEVNINNLAAVPSIVFGLLGLAVFINAF-GLPRSAPLVGGLVLSLMTLPTVIIAT 449

Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214
             +L  +P+ + + + +   S  Q  ++  +P + PG++   ++ ++          MI 
Sbjct: 450 RAALQAVPQSIRQAALAVGASRTQTVFHHVLPLAAPGILTGAIIGLAQALGETAPLLMIG 509

Query: 215 VGDTVIPLPGIG 226
           +   +   P +G
Sbjct: 510 MVAFIADAPTLG 521


>gi|332973147|gb|EGK11082.1| ABC superfamily ATP binding cassette transporter permease
           [Desmospora sp. 8437]
          Length = 570

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 52/410 (12%), Positives = 118/410 (28%), Gaps = 40/410 (9%)

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F    P   +      +     +       ++  ++  I   LEE + +     W++F 
Sbjct: 143 FFGLQEPPFRLRGVAGILLVHAYTMYVYFYMTVSSAIRGIHPALEEAAANLGAGPWRRFR 202

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P   P LV   ++          A  ++  G  V+ L    S I   +      ++
Sbjct: 203 SVILPLLTPALVAASLLVFMTSMASFSAPFLLAGGFRVLSLQIYFSKINGNLDMAATQSV 262

Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301
           + +++++  ++F+      R   +        R     P   W L L      +  +   
Sbjct: 263 ILSIISISFLLFMRWYQGRRDYRMMEKGVSHHRRELRNPWVKWPLVLAGTVGVILLLLPH 322

Query: 302 SWNFFSPLSNNVKKLCRT----LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
                  L        +T      +  +       ++    R S  +            +
Sbjct: 323 VTLVILSLVPEGTWTWQTYPTQFSLENYRLLMKDPRIWEPVRNSLWMAALATAGNFLFGV 382

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
             ++             D+L ++      +   VV + +     +P    +G     +  
Sbjct: 383 LTSYVLAKRKFKGKNLLDILVMLPWA---LPATVVAMNLILAFNVPTPFTLGHILVGTFW 439

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
           I P A  +   P                                  ++ +  A      +
Sbjct: 440 ILPLAYFVRHIP---------------------------------LVVRSTHAALEQLDD 466

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527
             +E A +     +  +R +ILP I P  + G + A   A    + S + 
Sbjct: 467 SLEEAARNLGARWFTAFRRVILPVILPGIMAGTLLAFVTAVGEFVSSVML 516


>gi|332666470|ref|YP_004449258.1| phosphate ABC transporter, inner membrane subunit PstC
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332335284|gb|AEE52385.1| phosphate ABC transporter, inner membrane subunit PstC
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 293

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 11/200 (5%)

Query: 15  IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY-----ASRTT 69
                  +L  + + G++ +      E   P +           +  P Y        T 
Sbjct: 16  FLAATLSVLVLLGIFGMLLMNGIKAFEHIRPSEFFFSSNWNPSAYGKPSYGIVAMLVSTF 75

Query: 70  LRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123
           L    AM I++      A   A+    +  +VL PI++++ +IP  ++GF+   +V  + 
Sbjct: 76  LVTFGAMCIAVPLGIGAAAYLAQVAQEKTRLVLKPIIELLAAIPSVVVGFIGIVMVGPFI 135

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             ++        L     +    +  +      ++ ++P   +E S +   + W     +
Sbjct: 136 AKVFGLSNGLTALNGSILLAVMSLPTIITVAEDAIRSVPNSFKEGSYALGANQWTTLTKV 195

Query: 184 GVPFSMPGLVWNMMMSMSGG 203
            +P S  G++  +++ M   
Sbjct: 196 ILPASYSGIIAAIILGMGRA 215



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 17/180 (9%)

Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFA 422
           N   Y    Y I    ++ F V      A  I +P+GI                 ++P  
Sbjct: 56  NPSAYGKPSYGIVAMLVSTFLVTFG---AMCIAVPLGIGAAAYLAQVAQEKTRLVLKPII 112

Query: 423 QLLAAFPANVFF--------PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474
           +LLAA P+ V          P +       +    L  S+L+   +   I+        +
Sbjct: 113 ELLAAIPSVVVGFIGIVMVGPFIAKVFGLSNGLTALNGSILLAVMSLPTIITVAEDAIRS 172

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            PN FKE + +     W     +ILP  +   +   I   G A   ++   +A+   + +
Sbjct: 173 VPNSFKEGSYALGANQWTTLTKVILPASYSGIIAAIILGMGRAIGETMTVLMATGNALAM 232


>gi|319405435|emb|CBI79054.1| permease protein of ABC transporter [Bartonella sp. AR 15-3]
          Length = 219

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM--------VLVPILDIMQSI 110
           H LP     T    +SA  ++L+F      L   + R  +        +L  I+D +++I
Sbjct: 7   HELPNAILDTLFMTISASFMALIFGLPLGLLLHTTTREELFPSFLIHCLLTIIIDSIRAI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L F ++       G  IG   + IF +  S +         S   +  +L E  R
Sbjct: 67  P-FIILAFYLLPITRAVIGSGIGIS-SVIFVLTISAIPFYARIAELSFKTVDHNLVEAVR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWN 195
           S   + +Q   ++ +  ++P L+  
Sbjct: 125 SMGANRFQIIRHVLISEALPSLITG 149



 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 10/137 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFP--ANVFFP 435
           T+F  +    +A I  +P+G+ +             I   +      + A P     F+ 
Sbjct: 16  TLFMTISASFMALIFGLPLGLLLHTTTREELFPSFLIHCLLTIIIDSIRAIPFIILAFYL 75

Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           L ++            +  ++      +             ++  E   S     ++  R
Sbjct: 76  LPITRAVIGSGIGISSVIFVLTISAIPFYARIAELSFKTVDHNLVEAVRSMGANRFQIIR 135

Query: 496 YIILPGIFPYYVTGAIT 512
           ++++    P  +TG   
Sbjct: 136 HVLISEALPSLITGFTV 152


>gi|326774194|ref|ZP_08233476.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces viscosus C505]
 gi|326636333|gb|EGE37237.1| proline/glycine betaine ABC transporter, permease protein
           [Actinomyces viscosus C505]
          Length = 226

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 63/172 (36%), Gaps = 4/172 (2%)

Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419
              ++ YI +   +   + +  L    +   +  ++IA++I +P G W+G      + +Q
Sbjct: 4   VLAALAYIADPAHWSGAMGIGPLLVQHVLYSLAGVLIAALIGVPAGWWVGHTGRGRTWVQ 63

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
           P +    + P      L    +      P +   +L +      +L   ++G  A     
Sbjct: 64  PLSGTARSLPTLGLITLFGLVLGVGLSAPMIAFVILAVPS----VLAGAMSGVRAASVMA 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            + A +  ++  +    + +P   P  V G  +A     + + ++     G 
Sbjct: 120 VDGARASGMSELQVLGRVEIPLGAPLLVGGLRSASLQVISTATLAAYTGAGG 171



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 15/178 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
             +  L  L+ ++I+ L           + R    + P+    +S+P LG +T   +   
Sbjct: 27  LVQHVLYSLAGVLIAALIGVPAGWWVGHTGRGRTWVQPLSGTARSLPTLGLITLFGLVLG 86

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +I   + A+ ++    +          +        + +R+  +S  Q    + 
Sbjct: 87  VGLSAPMIAFVILAVPSVLAGAM--------SGVRAASVMAVDGARASGMSELQVLGRVE 138

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242
           +P   P LV  +    S     +  + +           G+G  + L +K QD + +L
Sbjct: 139 IPLGAPLLVGGLR---SASLQVISTATLAA----YTGAGGLGRLMFLGLKTQDYVMML 189


>gi|289450368|ref|YP_003474433.1| phosphate ABC transporter permease PstA [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289184915|gb|ADC91340.1| phosphate ABC transporter, permease protein PstA [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 289

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389
             L+ C  + + Y+   F   ++ G+   + W+    +   F       +     I    
Sbjct: 7   RKLKDCLLRSLVYLCAAFAVSLLAGIIFYVFWRGSRTVTWEFLTGVKSVLTGKAGIAGNI 66

Query: 390 V--VVLIIIASIIWIPVGIWIGF-------RPHISSKIQPFAQLLAAFPANVFFPLVVSC 440
           V   ++II+  +I  P+GI           R  + S I+   + LA  P+ +F    +  
Sbjct: 67  VNTCLIIILTMVIAAPLGIGSAIYLSEYAERSRLVSLIEFATETLAGIPSIIFGLFGMLF 126

Query: 441 VS-YYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
                 L  +L    L +      +L  N      A P  ++  A +     W   R ++
Sbjct: 127 FGEKLGLGYSLLTGALTLILMILPLLTRNTEEALKAVPVMYRSAAIALGSGKWHMIRTVL 186

Query: 499 LPGIFPYYVTGAITACG 515
           LP   P  +TG I A G
Sbjct: 187 LPAALPGILTGIILAVG 203



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 5/182 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
            A  L+ GII  +      T     +  +  +      +      T L ++  MVI+   
Sbjct: 24  FAVSLLAGIIFYVFWRGSRTVTWEFLTGVKSVLTGKAGIAGNIVNTCLIIILTMVIAAPL 83

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      A+  RL  ++    + +  IP + F  F +++F          + L   
Sbjct: 84  GIGSAIYLSEYAERSRLVSLIEFATETLAGIPSIIFGLFGMLFFGEKLGLGY--SLLTGA 141

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +T +  ++L  +P      + +     W     + +P ++PG++  ++++
Sbjct: 142 LTLILMILPLLTRNTEEALKAVPVMYRSAAIALGSGKWHMIRTVLLPAALPGILTGIILA 201

Query: 200 MS 201
           + 
Sbjct: 202 VG 203


>gi|238925506|ref|YP_002939023.1| putative molybdate transport system permease/ATP-binding protein
           [Eubacterium rectale ATCC 33656]
 gi|238877182|gb|ACR76889.1| putative molybdate transport system permease/ATP-binding protein
           [Eubacterium rectale ATCC 33656]
 gi|291524203|emb|CBK89790.1| molybdate ABC transporter, permease protein [Eubacterium rectale
           DSM 17629]
          Length = 241

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 22/198 (11%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV----------- 121
           + A V S      +A L   ++          D + ++P++  L  TV            
Sbjct: 17  IVASVFSFFIGIAFAELVINTKGRVRAFW---DGLLTLPMV--LPPTVAGYILLRIFSTR 71

Query: 122 -----YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
                +  +    +V+   L  + A     +  M  +   +   I  ++   +R+  +S 
Sbjct: 72  RPFGSFLSHSMGIQVVHTWLGCVVAATIIALPLMYRNARAAFEQIDENVIYAARTLGISE 131

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           W+ FW + +P + PG++  + ++ +       A+ M+  G+       I   IA+ ++  
Sbjct: 132 WKIFWKIRLPMAKPGIISGVTLAFARAIGEYGATSMLA-GNIAGKTSTISQQIAMVVQSG 190

Query: 237 DLLAILYAMLTMLGVIFL 254
           D     +  + ++ + F 
Sbjct: 191 DYATAGFWCIVIIAISFA 208



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           N  A       +    A +  I+ W+ +  I LP   P  ++G   A   A      + +
Sbjct: 108 NARAAFEQIDENVIYAARTLGISEWKIFWKIRLPMAKPGIISGVTLAFARAIGEYGATSM 167

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
            + G+I  +T+ +   IA   + G +       +++     A 
Sbjct: 168 LA-GNIAGKTSTISQQIAMVVQSGDYATAGFWCIVIIAISFAC 209


>gi|146276836|ref|YP_001166995.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555077|gb|ABP69690.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 221

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 10/141 (7%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM--------QSIPILGFLTFT 119
           T   +  + +I            A S+R  +   P L+ +        +S P    L   
Sbjct: 16  TLYMVAISGLIGAAAGLPLGLFLATSKRGELFAAPWLNAVLGVLVNATRSTP-FIILVVA 74

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           +V       G  IG   AAI  +  +    +   +  ++  +   L E +R+   +  Q 
Sbjct: 75  IVPLTRAIAGTSIGTT-AAIVPLSIAAAPFIARIVEGAVREVDHGLIEAARAMGATPLQI 133

Query: 180 FWYLGVPFSMPGLVWNMMMSM 200
              + +P ++PG+V  + +++
Sbjct: 134 VTRVLLPEALPGIVLGLTLAL 154



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 43/139 (30%), Gaps = 10/139 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF--FPLVVSCVSY 443
           T++ V +  +I +   +P+G+++           P+   +     N     P ++  V+ 
Sbjct: 16  TLYMVAISGLIGAAAGLPLGLFLATSKRGELFAAPWLNAVLGVLVNATRSTPFIILVVAI 75

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVI--------AGASAFPNDFKEVASSFHITGWRWWR 495
             L   +  + +        +                    +   E A +   T  +   
Sbjct: 76  VPLTRAIAGTSIGTTAAIVPLSIAAAPFIARIVEGAVREVDHGLIEAARAMGATPLQIVT 135

Query: 496 YIILPGIFPYYVTGAITAC 514
            ++LP   P  V G   A 
Sbjct: 136 RVLLPEALPGIVLGLTLAL 154


>gi|190894459|ref|YP_001984752.1| putative sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|218509791|ref|ZP_03507669.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           Brasil 5]
 gi|190700120|gb|ACE94202.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
          Length = 299

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + +  +SL+ +   A    + R  G   + ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTALSLVASVFGAYAIERVRFTGSRQIGLVIFLAYLIPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 SLMAGALFGSLPVVILYSFFV 286



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 12/166 (7%)

Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422
            I Y+    +Y   L+       TM   V    ++ +  +     I       S+     
Sbjct: 79  HIKYLFLETSYPGWLWN------TMLVAVGSTALSLVASVFGAYAIERVRFTGSRQIGLV 132

Query: 423 QLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPND 478
             LA    P+ +F PL          +  L L              L        + P +
Sbjct: 133 IFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLLMGYF--RSIPFE 190

Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
            +E A       W+    IILP   P  ++  I A   +WN  I +
Sbjct: 191 LEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|85059894|ref|YP_455596.1| DL-methionine transporter permease subunit [Sodalis glossinidius
           str. 'morsitans']
 gi|84780414|dbj|BAE75191.1| ABC transporter permease component [Sodalis glossinidius str.
           'morsitans']
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--------RLGMVLVPILDIMQS 109
           +  L +    T +    +     +       L   SR        +L  +   ++++ +S
Sbjct: 6   IALLSRGVWETLMMTFVSGFFGFVIGLPIGVLLYVSRPGQIVDNAKLYRLASALVNVFRS 65

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
           +P    L   ++ F  +  G  IG + AAI  +       +   +  +L  IP  L E S
Sbjct: 66  VP-FIILLVWMIPFTRIIVGTSIGLK-AAIVPLTIGAAPFIARMVENALLEIPSGLVEAS 123

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           R+   +  Q    + +P ++PGL+    +++
Sbjct: 124 RAMGATPLQIIRKVLLPEALPGLINAATITL 154



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 41/142 (28%), Gaps = 12/142 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      +I +P+G+         I     +         +  + P     V+ 
Sbjct: 16  TLMMTFVSGFFGFVIGLPIGVLLYVSRPGQIVDNAKLYRLASALVNVFRSVPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L I G   +I   V       P+   E + +   T  +  
Sbjct: 76  IPFTRIIVGTSIGLKAAIVPLTI-GAAPFIARMVENALLEIPSGLVEASRAMGATPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGG 516
           R ++LP   P  +  A      
Sbjct: 135 RKVLLPEALPGLINAATITLIT 156


>gi|87302711|ref|ZP_01085522.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           WH 5701]
 gi|87282594|gb|EAQ74552.1| Phosphate ABC transporter, permease protein PstC [Synechococcus sp.
           WH 5701]
          Length = 320

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 29/276 (10%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           L  V+++GI   + +G +E      +  +V    D  +    A       L + +++L  
Sbjct: 38  LVAVVLLGIFLTVFNGAREAMATFGLSFLVTSGWDPVNSQYGAFTAIYGTLVSSLLALFI 97

Query: 83  TFVYATLAAK----------SRRLGMVLVPILDIMQSI---------------PILGFLT 117
                   A            R L  V+V +L  + S+               P L FL 
Sbjct: 98  AVPLGVGTAIFITENLIPRIWRELIGVMVELLAAIPSVVLGLWAIFVMEPLLRPFLSFLH 157

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
            ++ +F              A+  +    +  +T     +L  +P++L + +     + W
Sbjct: 158 QSLGWFPLFSTAPKGPGMAPAVLILVVMILPIITAISRDALNQVPQELRQGAYGVGSTRW 217

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPGIGSYIALAI 233
              + + +P ++  ++  +M+++       +A  MI+            PG      LA 
Sbjct: 218 IAIFNVILPAAISSIIGGVMLALGRAMGETMAVTMIIGNSMNFSWSLLAPGNTISAMLAN 277

Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  +   I  + L     I +        +  W  +
Sbjct: 278 QFGEADGIQVSALLYAAFILMLLTFAVNILAQWIVR 313



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 84/228 (36%), Gaps = 12/228 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQ 423
           +I         +++       ++R ++ +++  +  IP  + +G      +   ++PF  
Sbjct: 96  FIAVPLGVGTAIFITENLIPRIWRELIGVMVELLAAIP-SVVLGLWAIFVMEPLLRPFLS 154

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
            L    +  +FPL  +      + P + + ++MI      I        +  P + ++ A
Sbjct: 155 FLHQ--SLGWFPLFSTAPKGPGMAPAVLILVVMILPIITAI---SRDALNQVPQELRQGA 209

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL--GA 541
                T W     +ILP      + G + A G A   ++   +     ++   + L  G 
Sbjct: 210 YGVGSTRWIAIFNVILPAAISSIIGGVMLALGRAMGETMAVTMIIGNSMNFSWSLLAPGN 269

Query: 542 YI--AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587
            I    + + G    + +  L+   F+L L  F  + L  +  R   L
Sbjct: 270 TISAMLANQFGEADGIQVSALLYAAFILMLLTFAVNILAQWIVRKFSL 317


>gi|308050093|ref|YP_003913659.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Ferrimonas balearica DSM 9799]
 gi|307632283|gb|ADN76585.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Ferrimonas balearica DSM 9799]
          Length = 330

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 36  LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95
             GI       D +      +    +      T + +   + + +L     A +A    R
Sbjct: 88  AVGIIAMLTGMDWLPPALYGIAP-MIVGSLFATAVAVAIGVPVGILTAVFLAEIA--PPR 144

Query: 96  LGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151
           L  VL P ++++  IP + +    L   V     ++        LA    +    +  + 
Sbjct: 145 LVKVLRPAIELLAGIPSVVYGFFGLVVIVPLIEQVFGVPSGATVLAGSIVLAIMILPTVI 204

Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211
                SL  +PR  +E S +   S     +++ +P +  G++  +++ ++      +A  
Sbjct: 205 AVSETSLRAVPRQYKEGSLALGASNIYTIFHVLIPAARSGILTGVILGIARAVGETMAII 264

Query: 212 MIVVG 216
           M++  
Sbjct: 265 MVMGN 269



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 15/185 (8%)

Query: 367 IVNHFTYQDVLYVIWLGCITMFRV-VVLIIIASIIWIPVGIWIGFR------PHISSKIQ 419
           I+   T  D L     G   M    +    +A  I +PVGI           P +   ++
Sbjct: 91  IIAMLTGMDWLPPALYGIAPMIVGSLFATAVAVAIGVPVGILTAVFLAEIAPPRLVKVLR 150

Query: 420 PFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471
           P  +LLA  P+ V+         PL+            L  S+++       ++      
Sbjct: 151 PAIELLAGIPSVVYGFFGLVVIVPLIEQVFGVPSGATVLAGSIVLAIMILPTVIAVSETS 210

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
             A P  +KE + +   +      ++++P      +TG I     A   ++   +     
Sbjct: 211 LRAVPRQYKEGSLALGASNIYTIFHVLIPAARSGILTGVILGIARAVGETMAIIMVMGNA 270

Query: 532 IHLRT 536
             +  
Sbjct: 271 PAMPN 275


>gi|302338216|ref|YP_003803422.1| phosphate ABC transporter inner membrane subunit PstC [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635401|gb|ADK80828.1| phosphate ABC transporter, inner membrane subunit PstC [Spirochaeta
           smaragdinae DSM 11293]
          Length = 297

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 80/211 (37%), Gaps = 20/211 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ I  F +  G+ +  +     ++ +     T ++  + IW   +    V +  +I   
Sbjct: 28  VIFITLFILAEGLPLFKSVSLTDFLFSTDWSPTAEEPSFGIWAFIVGSIWVTLGALI--- 84

Query: 400 IWIPVGIWIGF------RPHISSKIQPFAQLLAAFPANVF-------FPLVVSCVSYYHL 446
           I +P+G+ +G       +P  +  I+   +LLA  P+ ++          ++  +S    
Sbjct: 85  IAVPMGLAVGIFMAEMAKPRAAKIIRSGVELLAGIPSVIYGLFGFFFIAPIIRTLSNSTT 144

Query: 447 NPNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
              +  + +++       + N       A P++ KE + +   T W+     I+P     
Sbjct: 145 GLGILTASIILAIMILPTIINITEVSIRAVPSELKEGSLALGATHWQSIVRTIIPAARSG 204

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRT 536
            + G +   G A   ++   + +     + T
Sbjct: 205 IIAGVVLGIGRAVGETMAVLMVAGNSPIMPT 235



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 60/164 (36%), Gaps = 6/164 (3%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLT 117
            +  +   +    L A++I++          A+    R   ++   ++++  IP + +  
Sbjct: 67  GIWAFIVGSIWVTLGALIIAVPMGLAVGIFMAEMAKPRAAKIIRSGVELLAGIPSVIYGL 126

Query: 118 FTVVYFMNLYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFR 173
           F   +   +         G  +     I    +     ++ + S+  +P +L+E S +  
Sbjct: 127 FGFFFIAPIIRTLSNSTTGLGILTASIILAIMILPTIINITEVSIRAVPSELKEGSLALG 186

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
            + WQ      +P +  G++  +++ +       +A  M+    
Sbjct: 187 ATHWQSIVRTIIPAARSGIIAGVVLGIGRAVGETMAVLMVAGNS 230


>gi|293374908|ref|ZP_06621206.1| phosphate ABC transporter, permease protein PstC [Turicibacter
           sanguinis PC909]
 gi|325844373|ref|ZP_08168128.1| phosphate ABC transporter, permease protein PstC [Turicibacter sp.
           HGF1]
 gi|292646457|gb|EFF64469.1| phosphate ABC transporter, permease protein PstC [Turicibacter
           sanguinis PC909]
 gi|325489178|gb|EGC91561.1| phosphate ABC transporter, permease protein PstC [Turicibacter sp.
           HGF1]
          Length = 301

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVY 122
            T   ++  + I+LL +   A +A   + L  ++ P ++++ +IP + +           
Sbjct: 87  ATLGAIVIGVPIALLTSIFIAEVA--PKWLANIVRPAVELLAAIPSVLYGVFGFAVITPM 144

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
             ++ P     + LA I  +    +  +   +  ++  +P   +E S +   S  Q  + 
Sbjct: 145 VKSISPYPTGDSLLAVIIVLTIMILPTIVAVVETAIRAVPSSYKEGSLALGASKMQTIFK 204

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + +P +  G++  +++ +       +A  ++   
Sbjct: 205 VILPAAKSGILTGVILGVGRAIGETMAVILVAGN 238



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 76/217 (35%), Gaps = 23/217 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF--FPLVVSC-- 440
           +V  + A +I +P+ +             +++ ++P  +LLAA P+ ++  F   V    
Sbjct: 85  IVATLGAIVIGVPIALLTSIFIAEVAPKWLANIVRPAVELLAAIPSVLYGVFGFAVITPM 144

Query: 441 ---VSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRY 496
              +S Y    +L   ++++       +  V+     A P+ +KE + +   +  +    
Sbjct: 145 VKSISPYPTGDSLLAVIIVLTIMILPTIVAVVETAIRAVPSSYKEGSLALGASKMQTIFK 204

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF---- 552
           +ILP      +TG I   G A   ++   + +          +   +   T   +     
Sbjct: 205 VILPAAKSGILTGVILGVGRAIGETMAVILVAGNPESGIPQTIFDRVRLLTTNIALEQGY 264

Query: 553 -----PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584
                 +++    ++    + +   +   +       
Sbjct: 265 AAELHEQMLFSTAVILFIFIMIINLVLSRIQAKAGDR 301


>gi|256852189|ref|ZP_05557575.1| transmembrane permease MsmF2 [Lactobacillus jensenii 27-2-CHN]
 gi|260661778|ref|ZP_05862689.1| transmembrane permease MsmF2 [Lactobacillus jensenii 115-3-CHN]
 gi|256615235|gb|EEU20426.1| transmembrane permease MsmF2 [Lactobacillus jensenii 27-2-CHN]
 gi|260547525|gb|EEX23504.1| transmembrane permease MsmF2 [Lactobacillus jensenii 115-3-CHN]
          Length = 187

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%)

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +  +   G  +GA +A IF +    +          L +IP +++E +     +  Q FW
Sbjct: 39  FLTDSILGNQVGAIIAVIFVMLWQGIAMPVIIFLAGLQSIPDEIKEAAAMDGANNTQIFW 98

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
            + +P+ +P +    +M++  G+        +  G        IG  I     + +    
Sbjct: 99  KIELPYLLPSISMVFIMALKAGFTAFDQIFALTSGGPTDATTSIGLLIYNYAFKNNQYGY 158

Query: 242 LYAMLTMLGVIFLYDQLL 259
             A+  +L V+     +L
Sbjct: 159 ANAIALVLFVVIALISIL 176



 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 4/132 (3%)

Query: 446 LNPNLWLSLLMIFGTQWY-ILFNVI---AGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
           L   +   + +IF   W  I   VI   AG  + P++ KE A+       + +  I LP 
Sbjct: 45  LGNQVGAIIAVIFVMLWQGIAMPVIIFLAGLQSIPDEIKEAAAMDGANNTQIFWKIELPY 104

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
           + P      I A    + A       + G     TT +G  I     K +       + +
Sbjct: 105 LLPSISMVFIMALKAGFTAFDQIFALTSGGPTDATTSIGLLIYNYAFKNNQYGYANAIAL 164

Query: 562 MCCFVLALNRFL 573
           +   V+AL   L
Sbjct: 165 VLFVVIALISIL 176


>gi|15640922|ref|NP_230553.1| ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121588136|ref|ZP_01677883.1| ABC transporter, permease protein [Vibrio cholerae 2740-80]
 gi|121729623|ref|ZP_01682116.1| ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147675345|ref|YP_001216383.1| ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153216623|ref|ZP_01950550.1| ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153817189|ref|ZP_01969856.1| ABC transporter, permease protein [Vibrio cholerae NCTC 8457]
 gi|227081081|ref|YP_002809632.1| ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229505489|ref|ZP_04394999.1| methionine ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229510841|ref|ZP_04400320.1| methionine ABC transporter permease protein [Vibrio cholerae B33]
 gi|229512995|ref|ZP_04402461.1| methionine ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229517962|ref|ZP_04407406.1| methionine ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229529992|ref|ZP_04419382.1| methionine ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229608508|ref|YP_002879156.1| methionine ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254227039|ref|ZP_04920598.1| ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254848041|ref|ZP_05237391.1| ABC transporter [Vibrio cholerae MO10]
 gi|255744695|ref|ZP_05418646.1| methionine ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262161171|ref|ZP_06030282.1| methionine ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262168673|ref|ZP_06036368.1| methionine ABC transporter permease protein [Vibrio cholerae RC27]
 gi|297581290|ref|ZP_06943214.1| ABC transporter, permease [Vibrio cholerae RC385]
 gi|298498973|ref|ZP_07008780.1| ABC transporter [Vibrio cholerae MAK 757]
 gi|23396752|sp|Q9KTJ6|METI_VIBCH RecName: Full=Probable D-methionine transport system permease
           protein metI
 gi|9655362|gb|AAF94068.1| ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547627|gb|EAX57726.1| ABC transporter, permease protein [Vibrio cholerae 2740-80]
 gi|121628600|gb|EAX61078.1| ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124114195|gb|EAY33015.1| ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|125620443|gb|EAZ48818.1| ABC transporter, permease protein [Vibrio cholerae V51]
 gi|126512223|gb|EAZ74817.1| ABC transporter, permease protein [Vibrio cholerae NCTC 8457]
 gi|146317228|gb|ABQ21767.1| ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227008969|gb|ACP05181.1| ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|227012725|gb|ACP08935.1| ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229333766|gb|EEN99252.1| methionine ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229344677|gb|EEO09651.1| methionine ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229349888|gb|EEO14842.1| methionine ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229350806|gb|EEO15747.1| methionine ABC transporter permease protein [Vibrio cholerae B33]
 gi|229357712|gb|EEO22629.1| methionine ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229371163|gb|ACQ61586.1| methionine ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254843746|gb|EET22160.1| ABC transporter [Vibrio cholerae MO10]
 gi|255737726|gb|EET93120.1| methionine ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022791|gb|EEY41497.1| methionine ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262028921|gb|EEY47574.1| methionine ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297534606|gb|EFH73443.1| ABC transporter, permease [Vibrio cholerae RC385]
 gi|297543306|gb|EFH79356.1| ABC transporter [Vibrio cholerae MAK 757]
 gi|327483642|gb|AEA78049.1| Methionine ABC transporter permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 225

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILD 105
             L+   L     +T   +  A  +          +   +++        L   L  +++
Sbjct: 10  FALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           I +S+P L  +   ++    L  G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  IGRSVPFLVLM-VAIIPVTKLIVGTFIGTT-AAIVPLTIGAIPFVARLIESALLEVPTGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P ++ ++ +++
Sbjct: 128 VEAAQSMGATPLQIIRKVLLPEALPTILNSVTITL 162



 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 58/191 (30%), Gaps = 16/191 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V +   +   + IP+G+ +             ++  +     +  + P  V    +
Sbjct: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +    +            + +  G   ++   + +     P    E A S   T  +  R
Sbjct: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  +           + S ++     G +          I     +     +
Sbjct: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVA------IRYGFHRYDITIM 197

Query: 556 VLGVLIMCCFV 566
            + V+++   V
Sbjct: 198 AVTVVMLIVLV 208


>gi|294660208|ref|NP_852822.2| phosphate ABC transporter permease PstC/PstA [Mycoplasma
           gallisepticum str. R(low)]
 gi|284811858|gb|AAP56390.2| ABC-type phosphate transport system permease pstC/pstA [Mycoplasma
           gallisepticum str. R(low)]
 gi|284930283|gb|ADC30222.1| ABC-type phosphate transport system permease pstC/pstA [Mycoplasma
           gallisepticum str. R(high)]
          Length = 652

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            ++  +I    HG      P   +     +   +S  +    T + +   ++I+   +  
Sbjct: 372 FILWILIYTFYHGFIAIFSPDQTIT----SFAANSTGRATVNTLVIIFFGILIAFPISLF 427

Query: 86  YATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN----LYPGKVIGAELAA 138
            A      A++ +    ++  +D + S P + F  F + +F+        G+   + +A 
Sbjct: 428 IAIYVNEYARNNKAKTTILFFIDALSSTPSILFGIFGLTFFIQTLWLAIGGRSSNSMIAG 487

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           I  I    +      + Q+L ++P    E S +  +S  Q    + +P
Sbjct: 488 ILTISLVIMPAFIRMLQQALASVPNSTREASYALGISRSQTILKIILP 535



 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 66/516 (12%), Positives = 160/516 (31%), Gaps = 43/516 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           + FV +   I        E+           +  +   +    S T      +++I+   
Sbjct: 31  ITFVGIFAFIFYKSIPGWESYGKSIFRLDFNLVQNKAGIWAPLSVTLFVTFVSLLIAAPI 90

Query: 83  TFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTV----VYFMNLYPGKVIGAEL 136
               A         R       I++I+  IP + F  F           ++  +     +
Sbjct: 91  GVNTAIFIKFRLKERWRKTFRIIINILAGIPSVVFGLFAANSLGFLVQVIFDTRTSWNLI 150

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
            AI  +    +  +    Y SL ++   +   S +   +  +  + +    +  G+  ++
Sbjct: 151 TAIIMLTFMIIPTVVAMSYNSLDSVDMSILSASIALGTTKTKSIYKIFKKEAKNGIYVSL 210

Query: 197 MMSMSGGWFFVVASEMI-------VVGDTVI------PLPGIGSYIALAIKEQDLLAILY 243
           + + S      +A   I       +VG T         L  IG+ I+     ++    L 
Sbjct: 211 LTAFSRAISESMALNFILTSQNYNIVGHTSFNDFIQSGLKTIGAIISYNFFAENGSENLR 270

Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303
           ++L + G+I     ++   ++++ NK   ++             +  +T     I +   
Sbjct: 271 SVLYLFGIILFIFTIIINILVLFINKSSTKKKYP--------WAIKVETFIANIILFIPN 322

Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD-----IFWFCVVCGVAIG 358
                +   +    R+    + H     ++     R +         + +   +      
Sbjct: 323 KISQSIVYLINLNKRSASYFKVHKNAIRVKAYDYWRQTVEFICMTICVGFILWILIYTFY 382

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHIS 415
             + +I       T             T+  +   I+IA  I + + I++          
Sbjct: 383 HGFIAIFSPDQTITSFAANSTGRATVNTLVIIFFGILIAFPISLFIAIYVNEYARNNKAK 442

Query: 416 SKIQPFAQLLAAFPANVFFPL--------VVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467
           + I  F   L++ P+ +F           +   +     N  +   L +        +  
Sbjct: 443 TTILFFIDALSSTPSILFGIFGLTFFIQTLWLAIGGRSSNSMIAGILTISLVIMPAFIRM 502

Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
           +    ++ PN  +E + +  I+  +    IILP + 
Sbjct: 503 LQQALASVPNSTREASYALGISRSQTILKIILPQVI 538


>gi|240102659|ref|YP_002958968.1| Maltose transport system permease protein (malG) [Thermococcus
           gammatolerans EJ3]
 gi|239910213|gb|ACS33104.1| Maltose transport system permease protein (malG) [Thermococcus
           gammatolerans EJ3]
          Length = 447

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122
            Y  R+ +     +V++LLF    A   ++ +  G   +    +M +    G     +V 
Sbjct: 235 GYLKRSLIIASLTVVLTLLFAVPAAYAFSRLKFFGREHILYFYLMFTQVSGGLGIAGLVA 294

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQ-VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +     +   +  +  I+ +  V   T+ +   L +I  D +E +     +  Q  W
Sbjct: 295 LYGMLVKLDLTNNIYVLPLIYAAGGVPFNTWLLKSYLDSISPDFDEAALVDGANYLQIIW 354

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241
           ++ +P ++PG+    + +  GGW  ++ + +++  ++  PL      + L     DL  +
Sbjct: 355 HVLLPMALPGIATVAIFAFIGGWTELILASLLIDNESKYPLT-----VWLYSMLNDLRNV 409

Query: 242 LYAMLTMLGVIFLYDQLL 259
            +   +   ++F     +
Sbjct: 410 SWNQFSAAALLFALPVFI 427



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVI---AGASAFPNDFKEVASSFHITGWRWWRY 496
            +    L  N+++  L+         FN     +   +   DF E A        +   +
Sbjct: 298 MLVKLDLTNNIYVLPLIYAAGGVP--FNTWLLKSYLDSISPDFDEAALVDGANYLQIIWH 355

Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           ++LP   P   T AI A  G W   I++ +          T
Sbjct: 356 VLLPMALPGIATVAIFAFIGGWTELILASLLIDNESKYPLT 396


>gi|226324746|ref|ZP_03800264.1| hypothetical protein COPCOM_02532 [Coprococcus comes ATCC 27758]
 gi|225207194|gb|EEG89548.1| hypothetical protein COPCOM_02532 [Coprococcus comes ATCC 27758]
          Length = 234

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 20/200 (10%)

Query: 77  VISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP---GKVI 132
           + + + +F     AA+   +    L  +LD + ++P++  L  TV  F  L      + +
Sbjct: 24  IAATIVSFFLGIWAARKMLKAKTGLRAVLDGILTLPLV--LPPTVAGFFLLLIFSTRRTV 81

Query: 133 GAELAAIFAIFTSQVWN-------------MTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
           G+ L   F I   Q W              M  +   +   +  +L   +++  +  W+ 
Sbjct: 82  GSYLYTTFDIKIVQSWAGCVIAATVIAFPLMYRNARAAFEQVDVNLIYAAQTLGMPEWKI 141

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
           FW + +P + PG+    +++ +       A+ M+  G+       I   IA+ I++ D  
Sbjct: 142 FWRVIMPAAGPGVASGTILAFARALGEYGATSMLA-GNIPGKTATISQRIAMVIQDGDYQ 200

Query: 240 AILYAMLTMLGVIFLYDQLL 259
                +  ++ + F    L+
Sbjct: 201 TAGVWVGIVILIAFGIVVLM 220



 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 1/121 (0%)

Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512
            +         +  N  A       +    A +  +  W+ +  +I+P   P   +G I 
Sbjct: 101 VIAATVIAFPLMYRNARAAFEQVDVNLIYAAQTLGMPEWKIFWRVIMPAAGPGVASGTIL 160

Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
           A   A      + + + G+I  +T  +   IA   + G +    + V I+      +   
Sbjct: 161 AFARALGEYGATSMLA-GNIPGKTATISQRIAMVIQDGDYQTAGVWVGIVILIAFGIVVL 219

Query: 573 L 573
           +
Sbjct: 220 M 220


>gi|92113602|ref|YP_573530.1| phosphate ABC transporter permease [Chromohalobacter salexigens DSM
           3043]
 gi|91796692|gb|ABE58831.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 388

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPIL 113
           ++  +   A  T + ML  M +      + A      A   RL  ++   ++ + ++P +
Sbjct: 162 ELAGIASAAIGTVMTMLVTMAVCFPIGVMTAVYLEEFAPDNRLTQLIEININNLAAVPSI 221

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F    +  +++ + G    + L     +    +  +  S   +L ++P  +   +    
Sbjct: 222 LFGLLGLAIYISFF-GVPRSSPLVGGLTLALMTLPVIIISTRAALRSVPDSIRHAAFGVG 280

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
            S WQ      +P S+PG++   ++ ++  
Sbjct: 281 CSRWQVVRDHVLPVSLPGILTGSIIGLAQA 310



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPH 413
             + + +  +        ++  +      T+  ++V + +   I +   +++        
Sbjct: 144 AALKFNTTFFTTGDSKMPELAGIASAAIGTVMTMLVTMAVCFPIGVMTAVYLEEFAPDNR 203

Query: 414 ISSKIQPFAQLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
           ++  I+     LAA P+ +F      + +S       +P +    L +  T   I+ +  
Sbjct: 204 LTQLIEININNLAAVPSILFGLLGLAIYISFFGVPRSSPLVGGLTLALM-TLPVIIISTR 262

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
           A   + P+  +  A     + W+  R  +LP   P  +TG+I     A
Sbjct: 263 AALRSVPDSIRHAAFGVGCSRWQVVRDHVLPVSLPGILTGSIIGLAQA 310


>gi|311104030|ref|YP_003976883.1| D-methionine transporter permease MetI 1 [Achromobacter
           xylosoxidans A8]
 gi|310758719|gb|ADP14168.1| D-methionine transport system permease protein MetI 1
           [Achromobacter xylosoxidans A8]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T L +  A  I+++       +          +++ +  VL  +++  +S+P 
Sbjct: 9   LITSLLDTLLMVGVASAIAVVVGIPLGVILTVTARGNMLENQSVNHVLGAVINATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L     IG   AAI  +  + +  M      ++  +   L   +R+ 
Sbjct: 68  FVILMVAIIPFTRLVAQTSIGTT-AAIVPLSVAAIPFMARIAENAMREVDPGLITAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P S+PGL+   ++++
Sbjct: 127 GASPMQIIMKVLLPESLPGLIAATVVTV 154



 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 12/155 (7%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFA 422
            + Q +  +I     T+  V V   IA ++ IP+G+ +             ++  +    
Sbjct: 1   MSPQLIDLLITSLLDTLLMVGVASAIAVVVGIPLGVILTVTARGNMLENQSVNHVLGAVI 60

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG---ASAFPNDF 479
               + P  +   + +   +      ++  +  ++  +   I F                
Sbjct: 61  NATRSVPFVILM-VAIIPFTRLVAQTSIGTTAAIVPLSVAAIPFMARIAENAMREVDPGL 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              A +   +  +    ++LP   P  +   +   
Sbjct: 120 ITAARAMGASPMQIIMKVLLPESLPGLIAATVVTV 154


>gi|291562281|emb|CBL41097.1| phosphate ABC transporter membrane protein 2, PhoT family (TC
           3.A.1.7.1) [butyrate-producing bacterium SS3/4]
          Length = 292

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 73/189 (38%), Gaps = 8/189 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVI 78
            + F LV      LL G     +   ++   P         S+      T   +  ++++
Sbjct: 16  TVIFYLVAIFFFALLIGFAGKVIIGGLMGAKPEMFRFARKGSIGNQLFNTIYLVFISLLV 75

Query: 79  SLLFTFVYAT---LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+           + AK  ++   L   ++ + S+P +    F  + F+  +   +  + 
Sbjct: 76  SIPLGVCAGIYLAMYAKQGKMTKFLRMCIETLSSLPSIVVGLFGYLVFLVFF--GMGKSL 133

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +A   ++    +  +T +   ++  +P    + S     + WQ  +++ +P  +P ++  
Sbjct: 134 MAGALSVSILTLPLITTTTEDAIKGLPAGYFQASLGLGATKWQSIFHVLLPACLPRIMTG 193

Query: 196 MMMSMSGGW 204
           ++++   G+
Sbjct: 194 VILAAGRGF 202



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 73/183 (39%), Gaps = 6/183 (3%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSI-GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401
           ++ IF+F ++ G A  +    + G     F +     +      T++ V + ++++  + 
Sbjct: 21  LVAIFFFALLIGFAGKVIIGGLMGAKPEMFRFARKGSIGNQLFNTIYLVFISLLVSIPLG 80

Query: 402 IPVGIWIGFRPH---ISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLM 456
           +  GI++        ++  ++   + L++ P+ V   F  +V  V +      +  +L +
Sbjct: 81  VCAGIYLAMYAKQGKMTKFLRMCIETLSSLPSIVVGLFGYLVFLVFFGMGKSLMAGALSV 140

Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516
              T   I           P  + + +     T W+   +++LP   P  +TG I A G 
Sbjct: 141 SILTLPLITTTTEDAIKGLPAGYFQASLGLGATKWQSIFHVLLPACLPRIMTGVILAAGR 200

Query: 517 AWN 519
            + 
Sbjct: 201 GFG 203


>gi|169349474|ref|ZP_02866412.1| hypothetical protein CLOSPI_00192 [Clostridium spiroforme DSM 1552]
 gi|169293549|gb|EDS75682.1| hypothetical protein CLOSPI_00192 [Clostridium spiroforme DSM 1552]
          Length = 310

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 83/231 (35%), Gaps = 24/231 (10%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390
             + C+   +  ++ I  + ++ G         +  +             +   + +   
Sbjct: 25  IFRGCAIVSIIAVVSITGYMIISGTPAIFKEGLLEILFGTVWAPTAADPQYGILLIILTS 84

Query: 391 VVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442
           +V + +A  I +P+G++          P +   ++   +LLA  P+ V+  L +  V   
Sbjct: 85  IVGVFLAICIGVPIGVFTAINLAELANPKVRKIVKSAIELLAGIPSVVYGLLGILLVCPL 144

Query: 443 ---------------YYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSF 486
                           +    NL  +++++       L N+   A +A P+D+++ + + 
Sbjct: 145 MYDLERMIFAGSKTHQFTGGANLISAIIVLAIMILPTLINITETALNAVPDDYRKSSLAL 204

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
             +  +    ++LP      V+  +   G A   ++   + +   +++   
Sbjct: 205 GASKMQTIFKVVLPSAKSGIVSAIVLGVGRAIGEAMAILLVAGNSVNVPLP 255



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 61/171 (35%), Gaps = 20/171 (11%)

Query: 73  LSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFLTFTVV----- 121
           +  + +++          A       + ++  ++   ++++  IP + +    ++     
Sbjct: 85  IVGVFLAICIGVPIGVFTAINLAELANPKVRKIVKSAIELLAGIPSVVYGLLGILLVCPL 144

Query: 122 -------YFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
                   F      +  G    ++AI  +    +  +      +L  +P D  + S + 
Sbjct: 145 MYDLERMIFAGSKTHQFTGGANLISAIIVLAIMILPTLINITETALNAVPDDYRKSSLAL 204

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
             S  Q  + + +P +  G+V  +++ +       +A  ++      +PLP
Sbjct: 205 GASKMQTIFKVVLPSAKSGIVSAIVLGVGRAIGEAMAILLVAGNSVNVPLP 255


>gi|314959026|gb|EFT03128.1| phosphate ABC transporter, permease protein PstA [Propionibacterium
           acnes HL002PA1]
          Length = 337

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 7/185 (3%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--SLPQYASRTTLRMLSAMVIS 79
           L    L   +   +  GI            +  + D+           T    L   +IS
Sbjct: 46  LAVIPLAWLLFAAVRRGIGSLFHASWWTHSMDPSFDLAEQGAIHAIVGTLEIGLITSIIS 105

Query: 80  LLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           +    + A      A+  ++  V+   +D++  +P +    F     +  + G    +  
Sbjct: 106 VPIALMTAIFLVEYARGTKIAKVISFAVDVLTGVPSIVAALFVFAVVVTTFGGTQ--SAW 163

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
           A+  A+    V  +  S  + L  +P  L E S +  +S W+    + +P SM G++  +
Sbjct: 164 ASSLALMILMVPTVLRSTEEMLKLVPDSLREASFALGVSQWKTIMKVVLPTSMTGILTGI 223

Query: 197 MMSMS 201
           ++ ++
Sbjct: 224 VLGLA 228



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 18/199 (9%)

Query: 395 IIASIIWIPVGIWIG-------FRPHISSKIQPFAQLLAAFPAN--VFFPLVVSCVSYYH 445
           +I SII +P+ +              I+  I     +L   P+     F   V   ++  
Sbjct: 99  LITSIISVPIALMTAIFLVEYARGTKIAKVISFAVDVLTGVPSIVAALFVFAVVVTTFGG 158

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
                  SL ++      +L +        P+  +E + +  ++ W+    ++LP     
Sbjct: 159 TQSAWASSLALMILMVPTVLRSTEEMLKLVPDSLREASFALGVSQWKTIMKVVLPTSMTG 218

Query: 506 YVTGAITACGGAWN-------ASIVSEVASWGHIHLRTTGLGAYIAESTEKG--SFPEVV 556
            +TG +                   +   ++         L   I  +  +G    P V 
Sbjct: 219 ILTGIVLGLARVMGETAPLIVLLQFNTELTFNPSTPNFATLPTVITNAYTQGGVDTPVVW 278

Query: 557 LGVLIMCCFVLALNRFLWH 575
              + +   V+ LN     
Sbjct: 279 GAAITLIILVMGLNLIARR 297


>gi|296270894|ref|YP_003653526.1| phosphate ABC transporter inner membrane subunit PstA
           [Thermobispora bispora DSM 43833]
 gi|296093681|gb|ADG89633.1| phosphate ABC transporter, inner membrane subunit PstA
           [Thermobispora bispora DSM 43833]
          Length = 297

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T  ++L   +IS+      A          RL  ++   +D+M  IP +    F + +++
Sbjct: 81  TLEQVLLTSLISVPIGLFTAIYLVEYGAGGRLARIVGFFVDVMTGIPSVVAGLFILAFWI 140

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                   G   A   +I    V  +  S  + L  +PRDL E + +  +  W+    + 
Sbjct: 141 LALGMPFSGFAGALALSILMIPV--VVRSSEEMLRLVPRDLREAAYALGVPKWRTIVRVV 198

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P ++PGLV  +M++++
Sbjct: 199 LPTALPGLVTGVMLAVA 215



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 15/271 (5%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +    +   +  F +  + L     +  +L + W  V  G+A          +       
Sbjct: 10  RPVPAVRRAKDRFVQALVCLAFVLAIIPLLAVLWMVVRNGLARFDLEFFTHSMRGIGARD 69

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPAN 431
                      T+ +V++  +I+  I +   I++   G    ++  +  F  ++   P+ 
Sbjct: 70  AGGGAYHAIVGTLEQVLLTSLISVPIGLFTAIYLVEYGAGGRLARIVGFFVDVMTGIPSV 129

Query: 432 V--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           V   F L    ++          +L +       ++ +        P D +E A +  + 
Sbjct: 130 VAGLFILAFWILALGMPFSGFAGALALSILMIPVVVRSSEEMLRLVPRDLREAAYALGVP 189

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWN-------ASIVSEVASWGHIHLRTTGLGAY 542
            WR    ++LP   P  VTG + A                 ++  +    H    GL  +
Sbjct: 190 KWRTIVRVVLPTALPGLVTGVMLAVARVAGETAPLLLTVFFTDSINHDPFHGPQMGLPLF 249

Query: 543 IAEST---EKGSFPEVVLGVLIMCCFVLALN 570
           + +        +      G L +   V+ LN
Sbjct: 250 VFDQAGRPSDTAIDRAWTGALTLILIVMLLN 280


>gi|294155735|ref|YP_003560119.1| phosphate ABC transporter, permease PstA [Mycoplasma crocodyli
           MP145]
 gi|291600119|gb|ADE19615.1| phosphate ABC transporter, permease PstA [Mycoplasma crocodyli
           MP145]
          Length = 619

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 80/207 (38%), Gaps = 12/207 (5%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
            +   +  I+L+G + T +P   +     + + +S  +    T + +  ++ IS      
Sbjct: 355 FISWMMFYIILNGFKATLLPSSSL----FSFESNSTGRALINTLVIIFLSVSISFPVALF 410

Query: 86  YATLAAK---SRRLGMVLVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAA 138
            A   ++   ++++   L+ ++D + S P + F  F + +F         GK+  + +A 
Sbjct: 411 SAIYISEYLINKKIKNFLLFLIDALGSTPSIVFGIFGLTFFIQTLGLSAGGKMSNSLIAG 470

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I    + N    +YQ+   +P    + + +  +      + + +P S   +   +++
Sbjct: 471 ALTISLVILTNFIRGIYQAFNFVPSHYRDNAIALGIQKHTFIFKILIPQSFIYIFNILIL 530

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGI 225
            +        A   +  G T     GI
Sbjct: 531 GIGRV-IAETAPLYLTAGLTSSNQFGI 556



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 68/521 (13%), Positives = 165/521 (31%), Gaps = 43/521 (8%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             ++I II+  + GI        +     +  +   +      T + + ++M+I++    
Sbjct: 26  LAILITIISYSIPGIIHYKWSI-LGSEFNLNNNKAGIWLPLFITLVVVSTSMLIAVPTGI 84

Query: 85  VYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI--- 139
             +   A     +   V   I+D++   P + F  F +     +    +       I   
Sbjct: 85  KCSIFLAYRIKEKYAKVFRVIIDLLAGFPSVIFGIFALESLGPVLSYVLNLKTTLNILNG 144

Query: 140 -FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              +    +  +    Y +L +    + E S +  ++  +  + +      P +   +++
Sbjct: 145 SIMLSFMILPTIVSYTYNALKSANIKIYENSLALGVTKTKTIYKIVKKEVGPAIYLGILL 204

Query: 199 SMS------GGWFFVVASE----MIVVGDTVIPLPG---IGSYIALAIKEQDLLAILYAM 245
           ++           F++ S+    +   G       G   IG+ I+     ++    L  +
Sbjct: 205 AIGRAIGETMALNFILTSQNYGKISAGGFKSFWESGLKTIGAIISYNFFAENGGESLRGI 264

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           L  LG+I     +L      +  K          P+        + T+    I +  W  
Sbjct: 265 LYFLGLILFIITILINSFAYYMIK----------PSSQHKFNWLKNTHIW-LINFIMWIP 313

Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365
                      C+     +  F  +  ++ S + +S ++ I +   +    I   +++  
Sbjct: 314 RKTFLIRYSNSCQIPTSKKKSFIYDNYKI-SLEWLSIIITIGFISWMMFYIILNGFKATL 372

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG---FRPHISSKIQPFA 422
              +     +          T+  + + + I+  + +   I+I        I + +    
Sbjct: 373 LPSSSLFSFESNSTGRALINTLVIIFLSVSISFPVALFSAIYISEYLINKKIKNFLLFLI 432

Query: 423 QLLAAFPANVF----FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA---- 474
             L + P+ VF        +  +            +         IL N I G       
Sbjct: 433 DALGSTPSIVFGIFGLTFFIQTLGLSAGGKMSNSLIAGALTISLVILTNFIRGIYQAFNF 492

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
            P+ +++ A +  I    +   I++P  F Y     I   G
Sbjct: 493 VPSHYRDNAIALGIQKHTFIFKILIPQSFIYIFNILILGIG 533


>gi|253575291|ref|ZP_04852629.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845288|gb|EES73298.1| binding-protein-dependent transport system inner membrane component
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 222

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDI 106
           T+D   +      T   M  A + + L       L     R        +  ++  I++I
Sbjct: 8   TIDWAEMGVATLDTLKMMGFATLFTFLIGLPLGVLLYTFSRSQSLVLGWVYRIISLIVNI 67

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
           ++S+P    L   ++       G   G E   I  +           +  +L  + R + 
Sbjct: 68  LRSVP-FIILIVALIPVTRAIMGVSTGVE-GTIPPLVIGAAPFFARLVETALREVDRGVI 125

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           E S++   S +Q    + +P S+PGL+  M +++
Sbjct: 126 EASQAMGASSFQIIRKVLLPESLPGLIAGMTITV 159



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 61/215 (28%), Gaps = 20/215 (9%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--------HISSKIQPF 421
                D   +      T+  +    +   +I +P+G+ +             +   I   
Sbjct: 5   DLGTIDWAEMGVATLDTLKMMGFATLFTFLIGLPLGVLLYTFSRSQSLVLGWVYRIISLI 64

Query: 422 AQLLAAFP----ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477
             +L + P         P+  + +            L++     +  L            
Sbjct: 65  VNILRSVPFIILIVALIPVTRAIMGVSTGVEGTIPPLVIGAAPFFARLVETA--LREVDR 122

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
              E + +   + ++  R ++LP   P  + G         + + +S +   G +     
Sbjct: 123 GVIEASQAMGASSFQIIRKVLLPESLPGLIAGMTITVVTLVSYTAMSGMVGGGGLGDLAI 182

Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572
             G Y      +     +++ V+ M   V  L   
Sbjct: 183 RYGYY------RYETGIMIVSVIFMVILVQVLQML 211


>gi|159043964|ref|YP_001532758.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
 gi|157911724|gb|ABV93157.1| binding-protein-dependent transport systems inner membrane
           component [Dinoroseobacter shibae DFL 12]
          Length = 294

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 4/204 (1%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTV 120
            +    T +  LS + ISL F  +     ++S  +    ++    I +++P +  ++  +
Sbjct: 84  WRAGLNTMIVTLSVVAISLTFGTLGGYALSRSSFKYTFWILMAALIFRAMPHITLVSGYL 143

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
           + F  L    ++   +  + AI       M  S +    NIP+DL+E +     + +Q F
Sbjct: 144 LPFFELNIWGILPTTIIVLVAINQPFTLWMLRSFF---MNIPKDLDESAMVDGCTRFQAF 200

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
             + +P   PG++   + S    +     +  ++  D    +P I S++    +E +++ 
Sbjct: 201 RRVIIPVMWPGVITTGLFSFLLAYNDFAVTATLLSQDNQTMIPKIASFLGTTQQEGNVMF 260

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMI 264
            + A+++    +F+      R ++
Sbjct: 261 AVSAVVSATAPLFILVLFFQRQIV 284


>gi|237793896|ref|YP_002861448.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum Ba4 str. 657]
 gi|229262369|gb|ACQ53402.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum Ba4 str. 657]
          Length = 320

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 65/160 (40%), Gaps = 17/160 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-----QSIPILGFLTFT 119
             +T +  +S  +  L+  + +A    +S +    ++ +L I+       +    ++   
Sbjct: 100 LIKTLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILL 159

Query: 120 ---------VVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                    ++ F  ++ P +++  + A    +    +  M   +Y S+  +     E +
Sbjct: 160 KTEGVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAA 219

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFV 207
                S ++ F  + +P ++PG++   M+    + G+FF+
Sbjct: 220 NDLGASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFI 259



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-----AAFPANVFFPLV--- 437
           T+   +   +   II  P   +IG        I     +L     +      +  L+   
Sbjct: 103 TLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILLKTE 162

Query: 438 ------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSF 486
                 +      H    +  +   +F    YI+   +              + E A+  
Sbjct: 163 GVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAANDL 222

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             + ++ ++ I LP   P  + G +           +S++       L +  +
Sbjct: 223 GASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFISDLMGGSKTMLISNLI 275


>gi|323526531|ref|YP_004228684.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
 gi|323383533|gb|ADX55624.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1001]
          Length = 368

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 17/194 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +      ++ +    V      ++  +G  L   ++I  ++P L  L      F    P
Sbjct: 167 LVLTFIGTILGIAAGAVQGYFGGRTDIIGQRL---IEIWSAMPELYLLIIFSSIF---EP 220

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           G V+   L ++F       W +  S Y     L N  +D    +++  LS WQ  W   +
Sbjct: 221 GFVLLIVLLSLFG------W-IGLSDYVRAEFLRNRQQDYVRAAKAMGLSNWQIMWRHVL 273

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P S+  ++  +   MSG    + + + + +G    P P +G  +A      D   I  + 
Sbjct: 274 PNSLTPVITFLPFRMSGAILALTSLDFLGLGVPS-PTPSLGELLAQGKANLDAWWISLST 332

Query: 246 LTMLGVIFLYDQLL 259
             +L  + L    +
Sbjct: 333 FGVLVAMLLLLTFM 346



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 8/198 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI-QPFAQLLAAFPANVFF 434
              +++   +++   +VL  I +I+ I  G   G+    +  I Q   ++ +A P     
Sbjct: 152 FARLLYGFRVSVEFGLVLTFIGTILGIAAGAVQGYFGGRTDIIGQRLIEIWSAMPELYLL 211

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +  S      +   + LSL    G   Y+             D+   A +  ++ W+  
Sbjct: 212 IIFSSIFEPGFVLLIVLLSLFGWIGLSDYVR---AEFLRNRQQDYVRAAKAMGLSNWQIM 268

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS--- 551
              +LP      +T       GA  A    +    G +   T  LG  +A+         
Sbjct: 269 WRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG-VPSPTPSLGELLAQGKANLDAWW 327

Query: 552 FPEVVLGVLIMCCFVLAL 569
                 GVL+    +L  
Sbjct: 328 ISLSTFGVLVAMLLLLTF 345


>gi|228477456|ref|ZP_04062092.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           salivarius SK126]
 gi|228250891|gb|EEK10079.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           salivarius SK126]
          Length = 294

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +          AK  RL   +   ++I+ S+P +    F  + F+
Sbjct: 65  SFFLLVITLIISVPLSMGAGIFLSEYAKKGRLTNFVRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++  SL  +     E   +  LS W+   ++ 
Sbjct: 125 VQFQYGFSILSGALALTVFN--LPQMTRTVEDSLRTVHHTQREAGLALGLSRWETILHVV 182

Query: 185 VPFSMPGLVWNMMMSMS 201
           VP ++PG+V  ++++  
Sbjct: 183 VPEALPGIVTGIVLASG 199



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 21/193 (10%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
           ++      ++  + + I  + I +I   F           G I   ++    L++I  II
Sbjct: 16  VIAGIIVTILAALILYILVRGIPHISWSFLTSRSSSYKAGGGIGVQLYNSFFLLVITLII 75

Query: 401 WIPV----GIWIGFRP---HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++        +++ ++   ++L++ P+     +VV    Y          
Sbjct: 76  SVPLSMGAGIFLSEYAKKGRLTNFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFQYG 130

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYY 506
             ++ G     +FN+        +  +       E   +  ++ W    ++++P   P  
Sbjct: 131 FSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETILHVVVPEALPGI 190

Query: 507 VTGAITACGGAWN 519
           VTG + A G  + 
Sbjct: 191 VTGIVLASGRIFG 203


>gi|218458640|ref|ZP_03498731.1| putative permease component of ABC transporter [Rhizobium etli Kim
           5]
          Length = 268

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 6/166 (3%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +D   + L    + Q    +       + +S+L         A+    G     +L ++ 
Sbjct: 69  LDPFILFLKTEGVVQSFLNSLGAAGITVALSILLGAPAGYALARYDFRGKDSYRLLVLLT 128

Query: 109 SIPILGFL--TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
               L  L    TV +        ++G  L                        +PR+LE
Sbjct: 129 RAFPLAILALPLTVSFIRLGLYDTIVGVGLIHTVLALPFA----ALVTQGIFLGVPRELE 184

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212
           E +  F  +  Q F+ +  P ++PG+V   + +    W  V A+  
Sbjct: 185 EAAWVFGCTRIQAFFKVVAPLALPGIVATGVFAFVISWNEVFAASA 230



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 12/210 (5%)

Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIW 381
                  L S         +    +V   A+G       W   G          +L++  
Sbjct: 19  VSSRRWLLWSGIAALCAWVLVPIYLVALGALGGRQGVYVWPKTGLPTGLSLDPFILFLKT 78

Query: 382 LGCI-----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFP-ANVFF 434
            G +     ++    + + ++ ++  P G  +               LL  AFP A +  
Sbjct: 79  EGVVQSFLNSLGAAGITVALSILLGAPAGYALARYDFRGKDSYRLLVLLTRAFPLAILAL 138

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           PL VS +     +  + + L+       +            P + +E A  F  T  + +
Sbjct: 139 PLTVSFIRLGLYDTIVGVGLIHTVLALPFAALVTQGIFLGVPRELEEAAWVFGCTRIQAF 198

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVS 524
             ++ P   P  V   + A   +WN    +
Sbjct: 199 FKVVAPLALPGIVATGVFAFVISWNEVFAA 228


>gi|88855084|ref|ZP_01129749.1| Binding-protein-dependent transport systems inner membrane
           component [marine actinobacterium PHSC20C1]
 gi|88815612|gb|EAR25469.1| Binding-protein-dependent transport systems inner membrane
           component [marine actinobacterium PHSC20C1]
          Length = 233

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 60  SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS----------------RRLGMVLVPI 103
           +L +    T  ++   MVI+L+      TL   +                R +  VL  +
Sbjct: 16  TLLKATGETLFQVAITMVITLVVGLAAGTLLVVTDRGGILERPFGSLIAGRIVNAVLQAV 75

Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163
           +++ +SIP    L   ++ F  L  G   G   AAI  +  + +      +  SL  +  
Sbjct: 76  VNLGRSIP-FIILMIALIPFTRLLLGSAFGVT-AAIVPLTVAAIPFYARIVEISLREVNE 133

Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
            L E   S   + WQ    + VP ++PGL+  
Sbjct: 134 GLVEAGHSLGATRWQLVSKVIVPEAVPGLIRG 165



 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 20/173 (11%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH-------------- 413
              F  Q    ++     T+F+V + ++I  ++ +  G  +                   
Sbjct: 6   APGFWPQLFETLLKATGETLFQVAITMVITLVVGLAAGTLLVVTDRGGILERPFGSLIAG 65

Query: 414 --ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF---NV 468
             +++ +Q    L  + P  +   + +   +   L     ++  ++  T   I F    V
Sbjct: 66  RIVNAVLQAVVNLGRSIPFIILM-IALIPFTRLLLGSAFGVTAAIVPLTVAAIPFYARIV 124

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521
                       E   S   T W+    +I+P   P  + G  T      N S
Sbjct: 125 EISLREVNEGLVEAGHSLGATRWQLVSKVIVPEAVPGLIRGFTTTVVSIVNYS 177


>gi|320533098|ref|ZP_08033830.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320134670|gb|EFW26886.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 234

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 74/204 (36%), Gaps = 12/204 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           ++ ++  +     L+ + A++ S +     A LA  +R L  VLV    ++ +IP L   
Sbjct: 7   NLPTIAGHLLAHLLQAVPAIIASFVLAIPIARLARVARPLRAVLVTGSSLLYAIPSLALF 66

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               +                 I A+    +  +  +   +L  +   + + + +  +  
Sbjct: 67  VILPIILATGIRDPFN-----VIVALTLYGLALLVPATADALDAVDARVLDAATAMGMGR 121

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
            + F  + +P + P ++  + +         V++  +     V+ +  +G       +  
Sbjct: 122 LRCFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRG 174

Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260
               IL  +++   +  + D L+ 
Sbjct: 175 VTAEILTGLVSTAALALILDGLVL 198



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 8/201 (3%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432
             ++  +       + + V  II + ++ IP+         + + +   + LL A P+  
Sbjct: 5   LANLPTIAGHLLAHLLQAVPAIIASFVLAIPIARLARVARPLRAVLVTGSSLLYAIPSLA 64

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            F ++   ++    +P   +  L ++G    ++        A      + A++  +   R
Sbjct: 65  LFVILPIILATGIRDPFNVIVALTLYGLA-LLVPATADALDAVDARVLDAATAMGMGRLR 123

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
            +  + LP   P  +TG           ++ +   +     L    LG    +  ++G  
Sbjct: 124 CFLTVELPLAGPAILTGLRV-------VTVSTISLTTVGAVLGVRSLGWLFTDGFQRGVT 176

Query: 553 PEVVLGVLIMCCFVLALNRFL 573
            E++ G++      L L+  +
Sbjct: 177 AEILTGLVSTAALALILDGLV 197


>gi|304396672|ref|ZP_07378553.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
 gi|304356181|gb|EFM20547.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. aB]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T +    +     +       L          +++ L  VL  +++I +SI
Sbjct: 7   WLLGRGVWETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQILQNQGLYRVLSALVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  +P  L E SR
Sbjct: 67  P-FIILLVWMIPFTRVIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLELPTGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P +MPGLV    +++
Sbjct: 125 AMGATPMQIIRKVLLPEAMPGLVNAATITL 154



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 48/173 (27%), Gaps = 12/173 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      ++ +PVG+         I     +   +     +  + P     V+ 
Sbjct: 16  TLMMTFVSGFFGFVLGLPVGVLLYVTRPGQILQNQGLYRVLSALVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRVIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLELPTGLIEASRAMGATPMQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547
           R ++LP   P  V  A          S +      G +       G     +T
Sbjct: 135 RKVLLPEAMPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT 187


>gi|284166704|ref|YP_003404983.1| phosphate ABC transporter inner membrane protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284016359|gb|ADB62310.1| phosphate ABC transporter, inner membrane subunit PstC
           [Haloterrigena turkmenica DSM 5511]
          Length = 324

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 89/237 (37%), Gaps = 21/237 (8%)

Query: 11  ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHS--LP 62
           +  R + + F + A + V+  I I +  + + T         D +     + +       
Sbjct: 19  LKERSYGSFFVVCAVITVLTTIAIFVTLLSDATAFFSEYAIADFLTGTTWSPNPRGDGYI 78

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGFL 116
                  +  ++  +++ L      TL A       S R+  VL P+L+I+  IP + + 
Sbjct: 79  FGILPLVIGTITVTLMAALVALPIGTLTAIYLSEYASTRVRSVLKPMLEILAGIPTVVYG 138

Query: 117 TFTVVYF-----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            F +VY        L+P       L+A   I    +  ++     ++  +P +L +    
Sbjct: 139 YFALVYITPVLKATLFPSLQTFNALSASLMIGIMIIPMVSSISEDAMSAVPDELRQAGYG 198

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMS--GGWFFVVASEMIVVGDTVIPLPGIG 226
              + ++    + +P +M G+  + ++++S   G   +V   M           G+G
Sbjct: 199 LGATKYEVSTKIVLPAAMSGIASSYILAISRAIGETMIVVVAMGSQATFPEVYTGLG 255



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 19/245 (7%)

Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374
           +  R +  ++     +F  +C+   V   + IF   +    A    +    ++       
Sbjct: 11  QRSRGIEALKERSYGSFFVVCAVITVLTTIAIFVTLLSDATAFFSEYAIADFLTGTTWSP 70

Query: 375 DVLYVIWLGCIT--MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLA 426
           +     ++  I   +   + + ++A+++ +P+G              + S ++P  ++LA
Sbjct: 71  NPRGDGYIFGILPLVIGTITVTLMAALVALPIGTLTAIYLSEYASTRVRSVLKPMLEILA 130

Query: 427 AFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPN 477
             P  V+         P++ + +       N   + LMI      ++ ++     SA P+
Sbjct: 131 GIPTVVYGYFALVYITPVLKATLFPSLQTFNALSASLMIGIMIIPMVSSISEDAMSAVPD 190

Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN--ASIVSEVASWGHIHLR 535
           + ++       T +     I+LP       +  I A   A      +V  + S       
Sbjct: 191 ELRQAGYGLGATKYEVSTKIVLPAAMSGIASSYILAISRAIGETMIVVVAMGSQATFPEV 250

Query: 536 TTGLG 540
            TGLG
Sbjct: 251 YTGLG 255


>gi|220929519|ref|YP_002506428.1| phosphate ABC transporter inner membrane subunit PstC [Clostridium
           cellulolyticum H10]
 gi|219999847|gb|ACL76448.1| phosphate ABC transporter, inner membrane subunit PstC [Clostridium
           cellulolyticum H10]
          Length = 310

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 64/142 (45%), Gaps = 6/142 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           T +  L++ VIS+      A   ++  ++R+  ++ PIL+++  IP + F    LT    
Sbjct: 90  TLIITLTSAVISIPVGLFTAIYLSEYANKRVRKIIKPILEVLAGIPSIVFGYFALTLITP 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +  P   I   L+A  A+    +  ++     +L  +P  L + + +   +  +   
Sbjct: 150 VLKSFIPQTEIFNALSASIAVGIMTIPLVSSLSEDALRAVPDSLRQGALALGSTKMETSM 209

Query: 182 YLGVPFSMPGLVWNMMMSMSGG 203
            + VP ++ G+  + ++++S  
Sbjct: 210 KVVVPAAISGISASFVLAISRA 231



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 77/241 (31%), Gaps = 23/241 (9%)

Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377
           R    +        +     + + ++  I       G+ + +   SIG+         + 
Sbjct: 9   RNKKAVNSRIKRMRISNVIARNILFLFAIITILTTVGIIVSLLKDSIGFFSKVSITDFLF 68

Query: 378 YVIWLGCIT---------MFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFA 422
              W    +         +   +++ + +++I IPVG++            +   I+P  
Sbjct: 69  GTKWTPLFSSPSFGVLPLVTGTLIITLTSAVISIPVGLFTAIYLSEYANKRVRKIIKPIL 128

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI--------AGASA 474
           ++LA  P+ VF    ++ ++    +      +         +    I            A
Sbjct: 129 EVLAGIPSIVFGYFALTLITPVLKSFIPQTEIFNALSASIAVGIMTIPLVSSLSEDALRA 188

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
            P+  ++ A +   T       +++P          + A   A   +++  +A+    +L
Sbjct: 189 VPDSLRQGALALGSTKMETSMKVVVPAAISGISASFVLAISRAIGETMIVTIAAGARPNL 248

Query: 535 R 535
            
Sbjct: 249 T 249


>gi|29833949|ref|NP_828583.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29611074|dbj|BAC75118.1| putative ABC transporter permease [Streptomyces avermitilis
           MA-4680]
          Length = 223

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 58/158 (36%), Gaps = 6/158 (3%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
            T   D +           +     +  +  +  +VIS L     A +     + G + V
Sbjct: 4   LTGAWDWLTDPANWAGADGIWHRLVQHLVLTVVCLVISCLIALPVALVLGHLGKGGALAV 63

Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161
            I ++ +++P         V  + L        E   + A+    V  +  + Y  +  +
Sbjct: 64  NISNVGRAVPTFA------VLVLLLLTPLGKWGEGPTVVALVLFAVPPLLTNAYVGMREV 117

Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
            R +   +R   ++G Q  + + +P S+P ++  + ++
Sbjct: 118 DRSVVRAARGMGMTGRQMLFRVELPLSLPLVMNGVRIA 155



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 2/128 (1%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +   VV ++I+ +I +PV + +G      +     + +  A P      +++        
Sbjct: 31  LVLTVVCLVISCLIALPVALVLGHLGKGGALAVNISNVGRAVPTFAVL-VLLLLTPLGKW 89

Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
                +  L++F     +L N   G           A    +TG +    + LP   P  
Sbjct: 90  GEGPTVVALVLF-AVPPLLTNAYVGMREVDRSVVRAARGMGMTGRQMLFRVELPLSLPLV 148

Query: 507 VTGAITAC 514
           + G   A 
Sbjct: 149 MNGVRIAA 156


>gi|222081707|ref|YP_002541072.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726386|gb|ACM29475.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 299

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + +  +SL+ +   A    + R  G   + +L  +  +  P + F+   
Sbjct: 90  PGWLWNTILVAVGSTALSLIASVFGAYAIERIRFTGSRSIGLLIFLAYLVPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  + LA IF   T  +   T+ +     +IP +LEE +     S WQ 
Sbjct: 150 FIVFKL----GIYDSRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGASRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LMKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTIPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 SLMAGALFGSLPVVILYSFFV 286



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 6/143 (4%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF--PANVFFPLVVSCVSY 443
           T+   V    ++ I  +     I       S+       LA    P+ +F PL       
Sbjct: 96  TILVAVGSTALSLIASVFGAYAIERIRFTGSRSIGLLIFLAYLVPPSILFIPLAFIVFKL 155

Query: 444 YHLNPNLWLSLL--MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501
              +  L L              L        + P + +E A     + W+    IILP 
Sbjct: 156 GIYDSRLALIFTYPTFLIPFCTWLLMGYF--RSIPFELEESALVDGASRWQILMKIILPL 213

Query: 502 IFPYYVTGAITACGGAWNASIVS 524
             P  ++  I A   +WN  I +
Sbjct: 214 AVPGLISAGIFAFTLSWNEFIYA 236


>gi|218887049|ref|YP_002436370.1| spermidine/putrescine ABC transporter permease [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758003|gb|ACL08902.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 322

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 25/209 (11%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--------ILGFL 116
              +     ++ ++ LL  + +A   A +RR    L P L ++  IP            +
Sbjct: 65  LGESLWLAAASTLVCLLIGYPFAYAVATARRG---LRPWLLLLVVIPFWTNSLIRTYALI 121

Query: 117 TFT----------VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
                        +   +   P   +  E A    +  + +  M   +Y S+  + + L 
Sbjct: 122 IILKSQGIASNVLMALGLVSEPVSFMYGEFAVFTGLTYTLLPFMILPLYASIEKLDKRLL 181

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           + ++    S  + FW++ +P ++PG+V   M+            E++    +++    IG
Sbjct: 182 DAAKDLGASSLRAFWHVTLPLTLPGIVAGCMLVFLPSLGCFYIPEILGGAKSML----IG 237

Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           ++I           +  A  T+L V+ + 
Sbjct: 238 NFIKNQFLVARDWPLGAAASTILTVLLVL 266



 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 71/240 (29%), Gaps = 31/240 (12%)

Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI-----G 409
           V++   W +   + +    + +   +WL   +        ++  +I  P    +     G
Sbjct: 44  VSLVFTWDNYARLADPVFIRILGESLWLAAAST-------LVCLLIGYPFAYAVATARRG 96

Query: 410 FRPHISSKI------------QPFAQLLAA--FPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            RP +   +                 +L +    +NV   L +       +     +   
Sbjct: 97  LRPWLLLLVVIPFWTNSLIRTYALIIILKSQGIASNVLMALGLVSEPVSFMYGEFAVFTG 156

Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
           + +    +++  + A          + A     +  R + ++ LP   P  V G +    
Sbjct: 157 LTYTLLPFMILPLYASIEKLDKRLLDAAKDLGASSLRAFWHVTLPLTLPGIVAGCMLVFL 216

Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLW 574
            +     + E+       L    +G +I         +P       I+   ++ +    W
Sbjct: 217 PSLGCFYIPEILGGAKSML----IGNFIKNQFLVARDWPLGAAASTILTVLLVLMIIGYW 272


>gi|126465213|ref|YP_001040322.1| binding-protein-dependent transport systems inner membrane
           component [Staphylothermus marinus F1]
 gi|126014036|gb|ABN69414.1| binding-protein-dependent transport systems inner membrane
           component [Staphylothermus marinus F1]
          Length = 280

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 85/233 (36%), Gaps = 4/233 (1%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
               ++  + + L +  +   +P         +L      Q    + +  L  ++ S + 
Sbjct: 38  FIMTIIYALSDPLQYYDRYIIIPTRYTFEHVKSLLDLGAGQAIINSVIVALLTILFSFII 97

Query: 83  TFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
                   A+ + R    L   L  ++  PI+      V  ++ L     +     A  A
Sbjct: 98  GLPAGYAFARYKFRGKDSLKLFLVGLRMFPIIVIAVPLVTLYLQLGLNDTLLGVALAHTA 157

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           + T  V  +T S++     +P +LEE    F LS  Q F  + +P ++PGL    + +  
Sbjct: 158 MATPFVVLITSSIFAG---VPVELEEAGLIFGLSRIQAFLRITMPLALPGLTAAAIFTFI 214

Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
             W  V  + ++   +  +P   + S +A     +   A +  +  ++ V   
Sbjct: 215 MSWNEVFIAAVLTFRNRTLPAFVLQSALASTDFIKFAAAFIMVVPALVFVFVA 267



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 3/206 (1%)

Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQ 423
            Y   H      L        ++   ++ I+ + II +P G             ++ F  
Sbjct: 62  RYTFEHVKSLLDLGAGQAIINSVIVALLTILFSFIIGLPAGYAFARYKFRGKDSLKLFLV 121

Query: 424 LLAAFPANVF-FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
            L  FP  V   PLV   +     +  L ++L        +++    +  +  P + +E 
Sbjct: 122 GLRMFPIIVIAVPLVTLYLQLGLNDTLLGVALAHTAMATPFVVLITSSIFAGVPVELEEA 181

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
              F ++  + +  I +P   P     AI     +WN   ++ V ++ +  L    L + 
Sbjct: 182 GLIFGLSRIQAFLRITMPLALPGLTAAAIFTFIMSWNEVFIAAVLTFRNRTLPAFVLQSA 241

Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLA 568
           +A ST+   F    + V+    FV  
Sbjct: 242 LA-STDFIKFAAAFIMVVPALVFVFV 266


>gi|78356107|ref|YP_387556.1| phosphate ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218512|gb|ABB37861.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 297

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T      +M+I+L +    A      A+       +   ++ +  +P + F  F + +F+
Sbjct: 80  TIALSYGSMLIALPWGVCTAIYLHEYARPGPFVHAMRLAINNLAGVPSVVFGLFGLAFFV 139

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
            L    V  + LA +F +    +  +  +  ++L ++ +   E S +   + WQ    + 
Sbjct: 140 TLMQMGV--SLLAGMFTLAALILPLIIGASEEALRSVSQTYREASLALGATKWQTLAKVV 197

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P + PG++   ++ +   
Sbjct: 198 LPAATPGILTGAILGIGRA 216



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R S +L+     V+CG  +     ++ +       +D +    +    +  + +    + 
Sbjct: 30  RASVVLNALALAVICGFVLFYGLPAVNWEFLTAHPRDAMTAGGIFPCILGTIALSYG-SM 88

Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFP---LVVSCVSYYHLNPNLWLSL 454
           +I +P G+      H  ++  PF   +  A       P     +  ++++     + +SL
Sbjct: 89  LIALPWGVCTAIYLHEYARPGPFVHAMRLAINNLAGVPSVVFGLFGLAFFVTLMQMGVSL 148

Query: 455 LMIFGTQWYILFNVIAGA-----SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
           L    T   ++  +I GA      +    ++E + +   T W+    ++LP   P  +TG
Sbjct: 149 LAGMFTLAALILPLIIGASEEALRSVSQTYREASLALGATKWQTLAKVVLPAATPGILTG 208

Query: 510 AITACGGA 517
           AI   G A
Sbjct: 209 AILGIGRA 216


>gi|38234476|ref|NP_940243.1| phosphate transport system permease protein [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200739|emb|CAE50442.1| phosphate transport system permease protein [Corynebacterium
           diphtheriae]
          Length = 287

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117
           +H++     +T L    A+ + +L        A  SR LG +   ++D+M  IP +    
Sbjct: 67  LHAMIGTLVQTLLCSAVAIPLGVLAAIFLVEYAGDSR-LGKMCTFMVDVMTGIPSIVAAL 125

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
           F    ++ L   +  G  ++    I    V  +  +  + L  +P+DL E S +  +  W
Sbjct: 126 FVYSLWIVLLDFERSGIAVSIALLILMVPV--VVRTTEEMLRIVPQDLREASLALGVPRW 183

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMS 201
           +    + VP ++PG++  +M++++
Sbjct: 184 RTIVSVVVPTALPGIITGVMLAIA 207



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 62/202 (30%), Gaps = 19/202 (9%)

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--- 386
             L+            +     +  V   +    +G I+    +      +         
Sbjct: 7   RRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYSVAGGGA 66

Query: 387 ---MFRVVVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFP----ANV 432
              M   +V  ++ S + IP+G+              +         ++   P    A  
Sbjct: 67  LHAMIGTLVQTLLCSAVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPSIVAALF 126

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492
            + L +  + +      + ++LL++      ++          P D +E + +  +  WR
Sbjct: 127 VYSLWIVLLDFERSGIAVSIALLILMVPV--VVRTTEEMLRIVPQDLREASLALGVPRWR 184

Query: 493 WWRYIILPGIFPYYVTGAITAC 514
               +++P   P  +TG + A 
Sbjct: 185 TIVSVVVPTALPGIITGVMLAI 206


>gi|82543344|ref|YP_407291.1| putrescine transporter subunit: membrane component of ABC
           superfamily [Shigella boydii Sb227]
 gi|187732872|ref|YP_001880947.1| putrescine transporter subunit: membrane component of ABC
           superfamily [Shigella boydii CDC 3083-94]
 gi|81244755|gb|ABB65463.1| putrescine transport protein [Shigella boydii Sb227]
 gi|187429864|gb|ACD09138.1| putrescine ABC transporter, permease protein PotH [Shigella boydii
           CDC 3083-94]
 gi|320175296|gb|EFW50402.1| Putrescine transport system permease protein PotH [Shigella
           dysenteriae CDC 74-1112]
 gi|320183204|gb|EFW58062.1| Putrescine transport system permease protein PotH [Shigella
           flexneri CDC 796-83]
 gi|332097154|gb|EGJ02137.1| putrescine transport system permease protein potH [Shigella boydii
           3594-74]
          Length = 317

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 85/237 (35%), Gaps = 20/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     + ++  ++ + + +T D      Y  ++      +    LL  +  A   A S
Sbjct: 69  LMEWADGQLSITLNLGNFLQLTDDPLYFDAY-LQSLQVAAISTFCCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++      P  ++   LA 
Sbjct: 128 KPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  + V  M   +Y +L  I   L E +        + F+ + VP +  G++   M+
Sbjct: 188 YIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V  E++   D+++    IG  +           +  A+  ++ ++ + 
Sbjct: 248 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVAAAVAIIMLLLLIV 300



 Score = 38.0 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 5/139 (3%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N    L V       L+ NL + + +++    +++  +            E A       
Sbjct: 166 NFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARP 225

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES-TEK 549
            + +  +I+P      + G++     A    ++ E+       +    +G  + +     
Sbjct: 226 LKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNN 281

Query: 550 GSFPEVVLGVLIMCCFVLA 568
             +P      +IM   ++ 
Sbjct: 282 RDWPVAAAVAIIMLLLLIV 300


>gi|319901744|ref|YP_004161472.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Bacteroides helcogenes P 36-108]
 gi|319416775|gb|ADV43886.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Bacteroides helcogenes P 36-108]
          Length = 276

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 68/186 (36%), Gaps = 5/186 (2%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +  L   V++  I+  +++          +       +    +      T   M  + + 
Sbjct: 8   MLSLGVVVILFAILGFIVYKGIGVISWEFLTTAPADGMTAGGIFPAIVGTFCLMAGSALF 67

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +     +        A    +  ++  + + +  IP + F  F +  F+N        + 
Sbjct: 68  AFPVGVMSGIYMNEYAPKGWIVRLIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGD--SI 125

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           LA    +    +  +  +  ++L  IP  L E SR+   +  Q  W++ +P  MP ++  
Sbjct: 126 LAGSLTLGLLSLPLVIRTTEEALKTIPDSLREGSRALGATKLQTIWHVVLPMGMPNIITG 185

Query: 196 MMMSMS 201
           +++++ 
Sbjct: 186 LILALG 191



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA--SI 399
            ML +    ++  +   I ++ IG I   F        +  G I    V    ++A  ++
Sbjct: 7   RMLSLGVVVILFAILGFIVYKGIGVISWEFLTTAPADGMTAGGIFPAIVGTFCLMAGSAL 66

Query: 400 IWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNL 450
              PVG+  G           I   I+     L+  P+ VF    ++    Y    +  L
Sbjct: 67  FAFPVGVMSGIYMNEYAPKGWIVRLIRVMTNNLSGIPSIVFGLFGMALFVNYMDFGDSIL 126

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +   +   ++          P+  +E + +   T  +   +++LP   P  +TG 
Sbjct: 127 AGSLTLGLLSLPLVIRTTEEALKTIPDSLREGSRALGATKLQTIWHVVLPMGMPNIITGL 186

Query: 511 ITACG 515
           I A G
Sbjct: 187 ILALG 191


>gi|260778141|ref|ZP_05887034.1| phosphate transport system permease protein PstA [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606154|gb|EEX32439.1| phosphate transport system permease protein PstA [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 287

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLTFTVVY 122
            T   +++++ ++     + A    +  ++G  LV ++      +  IP + F  F + +
Sbjct: 71  ATVYMVIASIAVAAPLGIMTAIYLTEYAKVGSRLVKVIRFCTESLAGIPSIIFGLFGMTF 130

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+ +          A   +I    V  +  +  ++L  +P+   E S     S     W 
Sbjct: 131 FVAILGLGFSILSGALTLSILILPV--IIRTTEEALMAVPQTYREGSYGLGASKIYTIWR 188

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           L +P +MPG++ ++++S+ 
Sbjct: 189 LILPSAMPGILTSVILSIG 207



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 63/189 (33%), Gaps = 16/189 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIWLGCITMFRVVV 392
                   +  G    I W  +   + H  +           +   +  +   T++ V+ 
Sbjct: 19  GFIWAAAALTVGFLFWIIWYILSNGLQHVDWNFITDNYTRTGEEHGIFPMIVATVYMVIA 78

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPL-VVSCVSYYHLN 447
            I +A+ + I   I++     + S++    +     LA  P+ +F    +   V+   L 
Sbjct: 79  SIAVAAPLGIMTAIYLTEYAKVGSRLVKVIRFCTESLAGIPSIIFGLFGMTFFVAILGLG 138

Query: 448 PNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            ++    L +      ++         A P  ++E +     +       +ILP   P  
Sbjct: 139 FSILSGALTLSILILPVIIRTTEEALMAVPQTYREGSYGLGASKIYTIWRLILPSAMPGI 198

Query: 507 VTGAITACG 515
           +T  I + G
Sbjct: 199 LTSVILSIG 207


>gi|188533066|ref|YP_001906863.1| DL-methionine transporter permease subunit [Erwinia tasmaniensis
           Et1/99]
 gi|188028108|emb|CAO95965.1| D-methionine transport system permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSI 110
             L +    T +    +     +       L         A + +L  VL  +++I +SI
Sbjct: 7   WLLGRGVWETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIAANAKLYSVLSAMVNIFRSI 66

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P    L   ++ F  +  G  IG + AAI  +       +   +  +L  +P  L E SR
Sbjct: 67  P-FIILLVWMIPFTRIIVGTSIGLQ-AAIVPLTVGAAPFIARMVENALLELPTGLIEASR 124

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           +   +  Q    + +P ++PGLV    +++
Sbjct: 125 AMGATPLQIIRKVLLPEALPGLVNAATITL 154



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 12/176 (6%)

Query: 386 TMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQPFAQLLAAFPA---NVFF 434
           T+    V      ++ +PVG+         I     + S +     +  + P     V+ 
Sbjct: 16  TLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIAANAKLYSVLSAMVNIFRSIPFIILLVWM 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P    E + +   T  +  
Sbjct: 76  IPFTRIIVGTSIGLQAAIVPLTV-GAAPFIARMVENALLELPTGLIEASRAMGATPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           R ++LP   P  V  A          S +      G +       G     +T   
Sbjct: 135 RKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMN 190


>gi|187933562|ref|YP_001885397.1| phosphate ABC transporter permease PstA [Clostridium botulinum B
           str. Eklund 17B]
 gi|187721715|gb|ACD22936.1| phosphate ABC transporter, permease protein PstA [Clostridium
           botulinum B str. Eklund 17B]
          Length = 294

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 70/178 (39%), Gaps = 5/178 (2%)

Query: 27  LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86
           L+   I  +L+       P  +     +T     +      +   ++ +++I++      
Sbjct: 24  LLGAFIIYILYKGGNMIKPSFLFGKPKLTGAGGGIGPQLFNSFYMLIVSLIITVPIGIGA 83

Query: 87  ATLAAKSRRLGMVLVPI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143
               A+  + G  L  I   L+ + S+P +    F ++ F+N+       + LA   ++ 
Sbjct: 84  GIYLAEYAKEGKFLNIIRMSLETISSLPSIVIGMFGLLVFVNMAGWGY--SILAGAISVS 141

Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
              + +MT     ++    + ++E S     S WQ    L VP +M  ++  +++S  
Sbjct: 142 ILNIPSMTRISENAIRAASKKVKEASLGLGASKWQTIAKLTVPTAMSEILTGIILSAG 199



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 20/203 (9%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWI 402
             ++    I I ++    I   F +         G I      + + ++V +II   I I
Sbjct: 22  VGLLGAFIIYILYKGGNMIKPSFLFGKPKLTGAGGGIGPQLFNSFYMLIVSLIITVPIGI 81

Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462
             GI++         +      L    +     +V+                 ++ G   
Sbjct: 82  GAGIYLAEYAKEGKFLNIIRMSLETISSLP--SIVIGMFGLLVFVNMAGWGYSILAGAIS 139

Query: 463 YILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
             + N+ +          A     KE +     + W+    + +P      +TG I + G
Sbjct: 140 VSILNIPSMTRISENAIRAASKKVKEASLGLGASKWQTIAKLTVPTAMSEILTGIILSAG 199

Query: 516 GAWNASIVSEVASWGHIHLRTTG 538
                 I  E A++ +    ++G
Sbjct: 200 R-----IFGEAAAFLYTAGLSSG 217


>gi|170754731|ref|YP_001780208.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum B1 str. Okra]
 gi|169119943|gb|ACA43779.1| spermidine/putrescine ABC transporter, permease protein PotB
           [Clostridium botulinum B1 str. Okra]
          Length = 319

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 65/160 (40%), Gaps = 17/160 (10%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-----QSIPILGFLTFT 119
             +T +  +S  +  L+  + +A    +S +    ++ +L I+       +    ++   
Sbjct: 99  LIKTLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILL 158

Query: 120 ---------VVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                    ++ F  ++ P +++  + A    +    +  M   +Y S+  +     E +
Sbjct: 159 KTEGVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAA 218

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFV 207
                S ++ F  + +P ++PG++   M+    + G+FF+
Sbjct: 219 NDLGASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFI 258



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-----AAFPANVFFPLV--- 437
           T+   +   +   II  P   +IG        I     +L     +      +  L+   
Sbjct: 102 TLMISISTTLGCLIIGYPFAYFIGRSNKKYRGILLLLVILPFWTNSLVRTYAWIILLKTE 161

Query: 438 ------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-----GASAFPNDFKEVASSF 486
                 +      H    +  +   +F    YI+   +              + E A+  
Sbjct: 162 GVINTYLMKFGLIHSPLQMLYTDGAVFIGMLYIMLPFMVLPIYTSIEKLDMSYVEAANDL 221

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
             + ++ ++ I LP   P  + G +           +S++       L +  +
Sbjct: 222 GASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFISDLMGGSKTMLISNLI 274


>gi|167950177|ref|ZP_02537251.1| phosphate ABC transporter, permease protein PstC [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 462

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%)

Query: 32  INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91
           ++  L G+  +       D V  +    S+P +A  T L    AM++++    + A   +
Sbjct: 202 LSEFLFGLTWSPQMAIRADQVGSSGAFGSIPLFAG-TLLISFIAMLVAVPIGLMSAIYLS 260

Query: 92  KS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147
           +   RRL  V  P+L+I+  IP  + GF     V       G ++G ++++  A+    V
Sbjct: 261 EYAGRRLRAVAKPVLEILAGIPTVVYGFFAALTVAPFIRNSGGLLGLDVSSESALAAGLV 320

Query: 148 WNMTFSMYQS------LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
             +    + S      +  +P+ L + S     +  +    + +P ++PG+V  +++++S
Sbjct: 321 MGIMIIPFVSSLSDDVITAVPQALRDASYGLGATRSETIRQVIIPAALPGIVGGILLAVS 380

Query: 202 GG 203
             
Sbjct: 381 RA 382



 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 63/169 (37%), Gaps = 18/169 (10%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVF------- 433
               +++  IA ++ +P+G+             + +  +P  ++LA  P  V+       
Sbjct: 234 FAGTLLISFIAMLVAVPIGLMSAIYLSEYAGRRLRAVAKPVLEILAGIPTVVYGFFAALT 293

Query: 434 -FPLVVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHI 488
             P + +      L+ +   +L   L++       + ++     +A P   ++ +     
Sbjct: 294 VAPFIRNSGGLLGLDVSSESALAAGLVMGIMIIPFVSSLSDDVITAVPQALRDASYGLGA 353

Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           T     R +I+P   P  V G + A   A   +++  +A+    +L   
Sbjct: 354 TRSETIRQVIIPAALPGIVGGILLAVSRAIGETMIVVMAAGLSANLTAN 402


>gi|84503012|ref|ZP_01001114.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
 gi|84388757|gb|EAQ01628.1| ABC transporter, permease protein [Oceanicola batsensis HTCC2597]
          Length = 281

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 96/244 (39%), Gaps = 16/244 (6%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR-MLSA 75
           P IF L    +   I+  L   +     P  I +    +L +  L Q   +T ++  LS 
Sbjct: 37  PAIFGLTLLAMWELIVRGLDLPMVILPAPSMIAERFAASLPI--LWQDFVQTVVKGALSG 94

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
            VI  L  F  A L  +   L   L+P+   + ++PI+G     V+++   +  K     
Sbjct: 95  YVIGCLAAFGTAILVDRWDFLRRGLMPVGSFVAALPIVGTAPILVMWYGFDWQSKAAVVV 154

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           +   F +          ++   L    +   +  +++  S WQ FW L +P +MP +   
Sbjct: 155 VMVFFPV--------LVNITAGLQETTQMQRDQMKTWAASYWQGFWKLRLPAAMPFVFNG 206

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + +S +      + +E         P+ G+G  I++++ +  L  +   ++        +
Sbjct: 207 LKISSTLALIGAIVAEFFGS-----PIVGMGFRISISVGQLALDMVWAEIVVAAIAGSAF 261

Query: 256 DQLL 259
             ++
Sbjct: 262 YGIV 265



 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429
              +QD +  +  G ++        +I  +      I +     +   + P    +AA P
Sbjct: 77  PILWQDFVQTVVKGALS------GYVIGCLAAFGTAILVDRWDFLRRGLMPVGSFVAALP 130

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                P++V    +   +    + +++ F        N+ AG        ++   ++  +
Sbjct: 131 IVGTAPILVMWYGFDWQSKAAVVVVMVFFPVL----VNITAGLQETTQMQRDQMKTWAAS 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
            W+ +  + LP   P+   G   +   A   +IV+E      +     G+G  I+ S  +
Sbjct: 187 YWQGFWKLRLPAAMPFVFNGLKISSTLALIGAIVAEFFGSPIV-----GMGFRISISVGQ 241

Query: 550 GSFPEVVLGVLIMCCFVLAL 569
            +   V   +++      A 
Sbjct: 242 LALDMVWAEIVVAAIAGSAF 261


>gi|325293380|ref|YP_004279244.1| Ferric transport system permease protein [Agrobacterium sp. H13-3]
 gi|325061233|gb|ADY64924.1| Ferric transport system permease protein [Agrobacterium sp. H13-3]
          Length = 564

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 96/577 (16%), Positives = 183/577 (31%), Gaps = 60/577 (10%)

Query: 17  PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76
           P         +V  +  + L  +  T +   +       L   +L   A  T       M
Sbjct: 12  PRWLFPFVVSVVFALSALPLGRLAYTGIVSSLNGDTWRLLADPALWDAALNTLSTSFFGM 71

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVPILDIMQ-----SIPILGFL-----TFTVVYFMNL 126
           +ISL+    +A         G  ++  L ++       +  L ++     + T++  + L
Sbjct: 72  LISLMIGGGFALALTLCDIRGKSILSFLFMLPMMIPPQVTALSWIGMTGPSSTLLKAIGL 131

Query: 127 YPGKVIGAELAAIFAIFTSQ----VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
            P       L +I  I           +  S+   L  +P+D  E ++    S  +  + 
Sbjct: 132 APPMGSPQPLYSIAGIALLLGVQHAPLVYLSLRAGLLALPQDGIEAAKLSGASPRRVLFD 191

Query: 183 LGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240
           + +P S PGL+    +S   + G F + A   I      +P      + +        +A
Sbjct: 192 IILPLSTPGLIAGAAISFVSNVGNFGIPAILGIPASIFTLPTLIYSRFASFGASTFGDIA 251

Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNK-FRLERTTGIYPADSW--VLYLFRKTNFLRF 297
           IL  M+ ++ V  L  Q   R M     +   L      +    W  V  L         
Sbjct: 252 ILSTMIAIISVAGLALQ--ERAMKGRDYRIIGLSGKAATFKLSRWRVVAELVLWLVLFLM 309

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
           +        +        +  +L  +  H  E  L   S  R ++   +F   V     +
Sbjct: 310 LVAPLAALVASSLAPAYGVPLSLKTVTMHAYEELLYRQSVTRTAFRNSLFLATVTSLCLL 369

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417
            +   +  ++V   +                    + ++++++ IP  +     P +   
Sbjct: 370 AVTVLTAYFLVRGKSR------------------FMFLLSALVDIPYAL-----PGVVIS 406

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFP 476
           +       A  P           +    L   +W+ LL  F + + + L  +++    F 
Sbjct: 407 VSFVLLFAAPIP-----------LLGITLYGTIWIILLAYFSSFFAVSLKPMVSAFLQFD 455

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
              +E A       WR  + IILP + P      I     A N   VS +          
Sbjct: 456 PSLEEAARLSGAGFWRRLKDIILPLVGPAAGASVILVFLIACNELTVSALLWSAGTQT-- 513

Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573
             LG  I    + GSF       +++   V+ L   L
Sbjct: 514 --LGVLIYNLDDSGSFDLASALSVLVVIMVIFLMLLL 548


>gi|304314077|ref|YP_003849224.1| phosphate transport system permease protein [Methanothermobacter
           marburgensis str. Marburg]
 gi|302587536|gb|ADL57911.1| predicted phosphate transport system permease protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 283

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 8/181 (4%)

Query: 42  TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101
              P  ++     +     +      +    L A +I+       A   A+      ++ 
Sbjct: 44  ALTPEFLLSEPIDSGRAGGIAPMIVSSIYVTLIAGIIATPLGVGAAVYMAEYATEERIVK 103

Query: 102 PI---LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-S 157
            I    + + SIP + F  F + +F+       +G  + +   +         F + Q S
Sbjct: 104 LIKFGAETLASIPSIVFGLFGLAFFVVFLG---LGWSILSGGLVLALMALPTIFQVSQVS 160

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +P+   E S +   + W+  + + VP ++PG+   +++ M+       A+ M VVG 
Sbjct: 161 IETVPQSYREGSLALGATKWETIYRVVVPAALPGITTGVILGMARA-ISEAAAVMFVVGS 219

Query: 218 T 218
            
Sbjct: 220 A 220



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 57/167 (34%), Gaps = 11/167 (6%)

Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI--IIASIIWIPVGI----WIGFRPHIS 415
           + +  +   F   + +     G I    V  +   +IA II  P+G+    ++       
Sbjct: 40  KGLPALTPEFLLSEPIDSGRAGGIAPMIVSSIYVTLIAGIIATPLGVGAAVYMAEYATEE 99

Query: 416 SKIQPF---AQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470
             ++     A+ LA+ P+ VF  F L    V        L   L++       I      
Sbjct: 100 RIVKLIKFGAETLASIPSIVFGLFGLAFFVVFLGLGWSILSGGLVLALMALPTIFQVSQV 159

Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517
                P  ++E + +   T W     +++P   P   TG I     A
Sbjct: 160 SIETVPQSYREGSLALGATKWETIYRVVVPAALPGITTGVILGMARA 206


>gi|302390900|ref|YP_003826720.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Acetohalobium arabaticum DSM 5501]
 gi|302202977|gb|ADL11655.1| phosphate ABC transporter membrane protein 1, PhoT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 293

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 12/212 (5%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTV-- 120
            S + +    AM++S+      A + +     ++  ++ P+L+++  IP + +  F +  
Sbjct: 69  LSASLVVTFGAMIVSVPIGIASAVVISYILPPKVKNIVKPLLELLAGIPSVIYGLFGMKM 128

Query: 121 --VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
              +  N++          A   +    +  +      ++C++P+     S +   + W+
Sbjct: 129 LGPFLKNVFDLPTGLNGFTASIMLGIMALPIIVSLAEDAICSVPKSFRNASLALGATKWE 188

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALA 232
               + +P +  G+V  +++ M       +   M+  G  VI      P+  + + IA  
Sbjct: 189 TISRVILPTASSGIVTAVILGMGRAIGETMTVLMVAGGSAVIPKDILMPVRPMTASIAAE 248

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
           + E  + +  Y  L  +G++  +  LLF  + 
Sbjct: 249 MGEAPVGSDHYHALFGIGIVLFFITLLFNIIA 280



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 63/174 (36%), Gaps = 10/174 (5%)

Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFF 434
             +  L   ++      +I++  I I   + I     P + + ++P  +LLA  P+ ++ 
Sbjct: 63  FGIFPLLSASLVVTFGAMIVSVPIGIASAVVISYILPPKVKNIVKPLLELLAGIPSVIYG 122

Query: 435 PLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSF 486
              +  +  +           N + + +M+      I+ ++      + P  F+  + + 
Sbjct: 123 LFGMKMLGPFLKNVFDLPTGLNGFTASIMLGIMALPIIVSLAEDAICSVPKSFRNASLAL 182

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540
             T W     +ILP      VT  I   G A   ++   + + G   +    L 
Sbjct: 183 GATKWETISRVILPTASSGIVTAVILGMGRAIGETMTVLMVAGGSAVIPKDILM 236


>gi|289192046|ref|YP_003457987.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
 gi|288938496|gb|ADC69251.1| binding-protein-dependent transport systems inner membrane
           component [Methanocaldococcus sp. FS406-22]
          Length = 252

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 91/236 (38%), Gaps = 11/236 (4%)

Query: 25  FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84
             LV+  + I L  +   + P D+  ++        + +    T L    A +I+L+F  
Sbjct: 10  VFLVMIFLFIFLPIVYMLSNPGDLSQLLD-----KEVIEAFKTTLLAGAVATLIALIFGI 64

Query: 85  VYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-----AELAA 138
               + A+   +    +  +LD+  +IP        + +   +   K IG          
Sbjct: 65  PTGYILARYDFKFKSFIEAVLDLPMAIPHSVIGIIILSFIYGIDIIKFIGRYIVDNFWGI 124

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           +       +  M  S+     ++  ++E VSR+   S  + F+ + +P     ++  +++
Sbjct: 125 VVVYLFVGIPFMVNSIRDGFLSVDEEIEYVSRTLGASKIRTFFEISLPLIKNNIISGIIL 184

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
           S + G   V A  +I      +P+  +  +++  +     +++   ++++     L
Sbjct: 185 SFARGISEVGAILIIAYYPKTVPVLILERFMSFGLDASKPISVGMILVSIALFALL 240



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 90/242 (37%), Gaps = 14/242 (5%)

Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--YVIWLGCITMFRVVVLIIIASIIW 401
            DI     +  + + I    +  + N      +L   VI     T+    V  +IA I  
Sbjct: 4   FDIAMSVFLVMIFLFIFLPIVYMLSNPGDLSQLLDKEVIEAFKTTLLAGAVATLIALIFG 63

Query: 402 IPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCV---------SYYHLNPNLW 451
           IP G  +        S I+    L  A P +V   +++S +           Y ++    
Sbjct: 64  IPTGYILARYDFKFKSFIEAVLDLPMAIPHSVIGIIILSFIYGIDIIKFIGRYIVDNFWG 123

Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
           + ++ +F    +++ ++  G  +   + + V+ +   +  R +  I LP I    ++G I
Sbjct: 124 IVVVYLFVGIPFMVNSIRDGFLSVDEEIEYVSRTLGASKIRTFFEISLPLIKNNIISGII 183

Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571
            +     +      + ++    +    L  +++   +      + +G++++   + AL R
Sbjct: 184 LSFARGISEVGAILIIAYYPKTVPVLILERFMSFGLDASK--PISVGMILVSIALFALLR 241

Query: 572 FL 573
             
Sbjct: 242 MF 243


>gi|157964040|ref|YP_001504074.1| phosphate ABC transporter inner membrane subunit PstC [Shewanella
           pealeana ATCC 700345]
 gi|157849040|gb|ABV89539.1| phosphate ABC transporter, inner membrane subunit PstC [Shewanella
           pealeana ATCC 700345]
          Length = 301

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 7/197 (3%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
            FV   G+      G+ +  + +D +      L    +      T   ++  + I++L  
Sbjct: 47  WFVFSEGLPAFKEAGVSQMLLGKDWLPPALFGLLP-MMVASLISTAGAVIIGVPIAILTA 105

Query: 84  FVYATLAAKSRRLGMVLVPILDIMQSIPILGF----LTFTVVYFMNLYPGKVIGAELAAI 139
              A LA     L  ++ P ++++  IP + +    L   V    +++        LA +
Sbjct: 106 VFLAELA--PNWLANIIRPAVELLAGIPSVVYGFFGLVIIVPAIESIFNIPAGNTILAGV 163

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
             +    +  +      SL  +P   +E + +   S     + + +P +  G+   + + 
Sbjct: 164 IVLAIMILPTVITISETSLRALPPTYKEGALALGASHIFSIFKVLIPAARSGIYTGIALG 223

Query: 200 MSGGWFFVVASEMIVVG 216
           ++      +A  M++  
Sbjct: 224 VARAIGETMAIIMVMGN 240



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 61/182 (33%), Gaps = 10/182 (5%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQ 423
            +   +    +  ++ +   ++      +II   I I   +++       +++ I+P  +
Sbjct: 66  LLGKDWLPPALFGLLPMMVASLISTAGAVIIGVPIAILTAVFLAELAPNWLANIIRPAVE 125

Query: 424 LLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475
           LLA  P+ V+         P + S  +    N  L   +++       ++        A 
Sbjct: 126 LLAGIPSVVYGFFGLVIIVPAIESIFNIPAGNTILAGVIVLAIMILPTVITISETSLRAL 185

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           P  +KE A +   +       +++P       TG       A   ++   +       + 
Sbjct: 186 PPTYKEGALALGASHIFSIFKVLIPAARSGIYTGIALGVARAIGETMAIIMVMGNAPAMP 245

Query: 536 TT 537
            +
Sbjct: 246 GS 247


>gi|317405982|gb|EFV86260.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 569

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 72/556 (12%), Positives = 164/556 (29%), Gaps = 70/556 (12%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           +   LA  L + +  +             I            L +    +      + ++
Sbjct: 20  VLGFLALFLAVPVGTVFYSAFVNADGGFTIGHFGAFFNQPLML-EAFFNSLYVAGWSALL 78

Query: 79  SLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFM------------N 125
           + L     A    +    G +++  L ++  I P         + F              
Sbjct: 79  ASLIAVPLAYFTVRFDFRGALIIQTLGVLPLIMPPFVGAVAMQLIFGRSGSVNLLLNDRF 138

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
            +    +      IF         +  ++  +L NI   +EE + +    G++ F  +  
Sbjct: 139 GFTIPFMEGLNGVIFVEALHYFPFILMNLVVALRNIDGAMEEAAFNLGARGFRLFRRVIF 198

Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245
           P ++PG V     S+     F      +V+G T +  P   +Y+ +     +        
Sbjct: 199 PLALPGYVAGA--SLVFVKVFDDLGTPLVLGTTNMLAP--QAYLRITQVGLEDPLGYVIS 254

Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305
           + M+    L   L  R +         + +T     +S      R    +   G+     
Sbjct: 255 VIMIAFSILALWLSARVLKGR------DYSTLQKGGNSIQKRKLRPAESVLAYGWIVLVL 308

Query: 306 FSPLSNNVKKLCRTLGVIRFHFP-------ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358
              LS ++  L  +L  +    P        ++  + S  +      + +  +  GV + 
Sbjct: 309 LLVLSPHMGVLLLSLASVWSFAPLPDGYTLAHYGAVFSESQGMIANTLLYCGLAAGVDVI 368

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP-VGIWIGFRPHISSK 417
           +       ++                    R  +  + ++ + IP + + IG        
Sbjct: 369 LGTAIAYLMLRTRLPA--------------RQWLDFLASAALAIPGIVLAIGLLRTFRGV 414

Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT--QWYILFNVIAGASAF 475
             P                         L  + W+ +++ +      Y L + +A     
Sbjct: 415 EIP---------------------GTGTLLTSSWIVIMIAYSVRRLPYALRSCVAALQQI 453

Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
               +E A S   T  R  R +++P +    + G +T+   A      + +         
Sbjct: 454 NVSLEEAAQSLGATRLRTIRRVVVPLMAGGMLAGFVTSFVTAAVELSATIMLVTKDSQAP 513

Query: 536 -TTGLGAYIAESTEKG 550
            + G+  Y+  +  +G
Sbjct: 514 MSYGIYLYMQSAAGRG 529



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 24/209 (11%)

Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI------GYIVNHFTYQDVLYVIWL 382
               +L +   ++ +L + +  +   V +G  + S       G+ + HF       ++  
Sbjct: 4   PGHSRLPAGPVLAALLVLGFLALFLAVPVGTVFYSAFVNADGGFTIGHFGAFFNQPLMLE 63

Query: 383 GCITMFRVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441
                  V     ++AS+I +P+  +        + I     +L          + +  +
Sbjct: 64  AFFNSLYVAGWSALLASLIAVPLAYFTVRFDFRGALIIQTLGVLPLIMPPFVGAVAMQLI 123

Query: 442 SYYHLNPNLWL-----------------SLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484
                + NL L                   +       +IL N++          +E A 
Sbjct: 124 FGRSGSVNLLLNDRFGFTIPFMEGLNGVIFVEALHYFPFILMNLVVALRNIDGAMEEAAF 183

Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITA 513
           +    G+R +R +I P   P YV GA   
Sbjct: 184 NLGARGFRLFRRVIFPLALPGYVAGASLV 212


>gi|297158505|gb|ADI08217.1| phosphate ABC transporter, permease protein PstA [Streptomyces
           bingchenggensis BCW-1]
          Length = 358

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 77/210 (36%), Gaps = 13/210 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR--LGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           T  ++  A  I+     + A    +  R  L   +   +D+M  +P +    F + +++ 
Sbjct: 144 TLEQVGIATAIAAPIGLLTAVYLVEYGRGKLAKAVTFFVDVMTGVPSIVAGLFILTFWII 203

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           +      G   A   AI    +  +  S  + L  +P +L E S +  +  W+    + +
Sbjct: 204 ILDFDYSGFAGAMALAILMMPI--VVRSTEEMLKLVPNELREASLALGVPKWRTILKVVL 261

Query: 186 PFSMPGLVWNMMMSMSG-------GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238
           P ++ G++  +M++++            V  +  I           +  Y+    +  + 
Sbjct: 262 PTAIGGIITGVMLAVARIAGESAPIMLLVFGATGINNNPFDGAQSSLPYYVYEQWQLGND 321

Query: 239 LAI--LYAMLTMLGVIFLYDQLLFRPMIVW 266
            +    +A   +L    +   LL R +  W
Sbjct: 322 ASYNRAWAAALVLIAFVMILNLLARGIARW 351



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 101/293 (34%), Gaps = 22/293 (7%)

Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357
            G  +   F  +S  +          +     + + +C    V  ++ + W  V  G  +
Sbjct: 56  WGLIAALLFVLISFTLTTKVEGSRQAKDKLATSLIWVCFLLAVIPLVSLIWETVDRGRTV 115

Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH--IS 415
              +     +    T      V      T+ +V +   IA+ I +   +++       ++
Sbjct: 116 LDGYFLGHSMEGVQTILPGGGVYHAIIGTLEQVGIATAIAAPIGLLTAVYLVEYGRGKLA 175

Query: 416 SKIQPFAQLLAAFPANV------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
             +  F  ++   P+ V       F +++    Y      + L++LM+      ++ +  
Sbjct: 176 KAVTFFVDVMTGVPSIVAGLFILTFWIIILDFDYSGFAGAMALAILMMPI----VVRSTE 231

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529
                 PN+ +E + +  +  WR    ++LP      +TG + A       S    +  +
Sbjct: 232 EMLKLVPNELREASLALGVPKWRTILKVVLPTAIGGIITGVMLAVARIAGESAPIMLLVF 291

Query: 530 GHIHLRT-------TGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRF 572
           G   +         + L  Y+ E  + G+   +       L++  FV+ LN  
Sbjct: 292 GATGINNNPFDGAQSSLPYYVYEQWQLGNDASYNRAWAAALVLIAFVMILNLL 344


>gi|110640185|ref|YP_680395.1| phosphate ABC transporter permease [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282866|gb|ABG61052.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 290

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 5/139 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   M    +I+            +     R+  +L   +  +  IP + +    +  F 
Sbjct: 74  TLWIMALTTLIAFPIGIGAGIYLEEYNTKGRMSNLLEINISNLAGIPSIIYGLLGLEIFS 133

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                 +    +     +    +  +  S  ++L  +P +L E S +   + WQ  WY  
Sbjct: 134 RTL--MLGDTAITGALTLSLLILPIIIVSTREALKTVPYNLREASLALGATKWQTIWYQI 191

Query: 185 VPFSMPGLVWNMMMSMSGG 203
           +P S+PG+V   ++++S  
Sbjct: 192 LPASIPGIVTGAILAISRA 210



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVF--FPLVVSC 440
           T++ + +  +IA  I I  GI++     +  +S+ ++     LA  P+ ++    L +  
Sbjct: 74  TLWIMALTTLIAFPIGIGAGIYLEEYNTKGRMSNLLEINISNLAGIPSIIYGLLGLEIFS 133

Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500
            +    +  +  +L +       I+ +        P + +E + +   T W+   Y ILP
Sbjct: 134 RTLMLGDTAITGALTLSLLILPIIIVSTREALKTVPYNLREASLALGATKWQTIWYQILP 193

Query: 501 GIFPYYVTGAITACGGA 517
              P  VTGAI A   A
Sbjct: 194 ASIPGIVTGAILAISRA 210


>gi|300871272|ref|YP_003786145.1| spermidine/putrescine transport ATP-binding protein PotB
           [Brachyspira pilosicoli 95/1000]
 gi|300688973|gb|ADK31644.1| spermidine/putrescine transport ATP binding protein, PotB
           [Brachyspira pilosicoli 95/1000]
          Length = 271

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 24/213 (11%)

Query: 66  SRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDI-------MQSIPILGFLT 117
            R+ +    + ++ L+  +  +   ++ ++ +   L+ ++ +       +++     ++T
Sbjct: 53  MRSVMLAFVSTLVCLILAYPLSYYISRQNKTVQHALIMLVMLPMWMNFLLRT---YAWMT 109

Query: 118 FT--------VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
                      + F  L P K+I  + A +  +  + +  M   +Y  +  I + L E S
Sbjct: 110 ILEQNGLINKALIFFGLSPVKLINTQWAVLIGMIYNYLPFMILPLYSVMTKIHKSLIEAS 169

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229
           +    + +  F  +  P S+PG+   + M         V S M+  G  ++    IG  I
Sbjct: 170 QDLGANSFNVFTKVVFPLSLPGMASGVTMVFVAAVSTFVISRMLGGGSNIL----IGDLI 225

Query: 230 -ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261
               +       +  A+  +L VI L   LL +
Sbjct: 226 EMQFLGMSYNPNLGSAISLVLIVISLCAILLMQ 258



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 79/258 (30%), Gaps = 26/258 (10%)

Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392
           ++ +   + + L      +V  +      Q   + + +F   DV     +   ++    V
Sbjct: 4   KIPAIPYLIWTLVFILVPLVLVIYFAFTNQRGDFTIKNF--ADVSTFAPVIMRSVMLAFV 61

Query: 393 LIIIASIIWIPVGIWIGF-RPHISSKIQPFAQL-------LAAFPANVFFPLVVSCVSYY 444
             ++  I+  P+  +I      +   +     L       L  +    +  ++       
Sbjct: 62  STLVCLILAYPLSYYISRQNKTVQHALIMLVMLPMWMNFLLRTY---AWMTILEQNGLIN 118

Query: 445 HLNPNLWLSLLMIFGTQWYILFNVI------------AGASAFPNDFKEVASSFHITGWR 492
                  LS + +  TQW +L  +I            +  +       E +       + 
Sbjct: 119 KALIFFGLSPVKLINTQWAVLIGMIYNYLPFMILPLYSVMTKIHKSLIEASQDLGANSFN 178

Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL-GAYIAESTEKGS 551
            +  ++ P   P   +G       A +  ++S +   G   L    +   ++  S     
Sbjct: 179 VFTKVVFPLSLPGMASGVTMVFVAAVSTFVISRMLGGGSNILIGDLIEMQFLGMSYNPNL 238

Query: 552 FPEVVLGVLIMCCFVLAL 569
              + L ++++    + L
Sbjct: 239 GSAISLVLIVISLCAILL 256


>gi|293391516|ref|ZP_06635850.1| D-methionine transport system permease protein MetI
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952050|gb|EFE02169.1| D-methionine transport system permease protein MetI
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 225

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 59/151 (39%), Gaps = 10/151 (6%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQS 109
             ++      T     ++  ++++    +  L          ++ RL ++L  +++I +S
Sbjct: 14  WQTVWVSTYETVYISFASTFLAVIVGLPFGVLTFLTGKDEILQNARLNLILNIVINIGRS 73

Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
             I   +   ++     +         AAI  +    +  +      +L  IP+ L E +
Sbjct: 74  --IPFIILLIILLPFTRFVLNTTLGTTAAIIPLSICAMPFVARLTANALVEIPKGLTEAA 131

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           ++   + WQ      +P ++P L+  + +++
Sbjct: 132 KAMGATNWQIIRKFYLPEALPTLINGITLTL 162



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 12/186 (6%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW--------IGFRPHISSKIQ 419
           +   T Q    V      T++       +A I+ +P G+         I     ++  + 
Sbjct: 6   LTQLTPQMWQTVWVSTYETVYISFASTFLAVIVGLPFGVLTFLTGKDEILQNARLNLILN 65

Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI---FGTQWYILFNVIAGASAFP 476
               +  + P  +   +++   + + LN  L  +  +I        ++           P
Sbjct: 66  IVINIGRSIPFIILL-IILLPFTRFVLNTTLGTTAAIIPLSICAMPFVARLTANALVEIP 124

Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
               E A +   T W+  R   LP   P  + G           S ++ +   G +    
Sbjct: 125 KGLTEAAKAMGATNWQIIRKFYLPEALPTLINGITLTLVTLVGYSAMAGIVGGGGLGSLA 184

Query: 537 TGLGAY 542
              G Y
Sbjct: 185 INYGEY 190


>gi|290962477|ref|YP_003493659.1| ABC transporter permease [Streptomyces scabiei 87.22]
 gi|260652003|emb|CBG75135.1| probable ABC transport permease [Streptomyces scabiei 87.22]
          Length = 221

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 53/141 (37%), Gaps = 8/141 (5%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118
             L +Y        L  ++  L+ +     L  + RRL   ++ + +I+ SIP L     
Sbjct: 18  AELAEYTGVHLRLGLLPVLFGLIISVPLGILCHRFRRLYPPVLTVANILYSIPSLALFMI 77

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
            V Y            E   +  +    +  +  ++   L ++P  +   + +      +
Sbjct: 78  FVRYTGL--------TEQTVMIPLTLYTLSVLVPNVVDGLASVPEPVRLAATAMGFGAVR 129

Query: 179 KFWYLGVPFSMPGLVWNMMMS 199
           +   + +P ++P ++  + ++
Sbjct: 130 RVVQVELPIAVPVVIAGVRVA 150



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 5/147 (3%)

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
           ++   II +P+GI       +   +   A +L + P+   F + V           + L+
Sbjct: 35  VLFGLIISVPLGILCHRFRRLYPPVLTVANILYSIPSLALFMIFVRYTGLTEQTVMIPLT 94

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            L           NV+ G ++ P   +  A++      R    + LP   P  + G   A
Sbjct: 95  -LYTLSVLVP---NVVDGLASVPEPVRLAATAMGFGAVRRVVQVELPIAVPVVIAGVRVA 150

Query: 514 CGGAWNAS-IVSEVASWGHIHLRTTGL 539
              + +   +   +   G  +  T GL
Sbjct: 151 AVSSISLVAVGQLIGQGGLGYYITRGL 177


>gi|183597566|ref|ZP_02959059.1| hypothetical protein PROSTU_00847 [Providencia stuartii ATCC 25827]
 gi|188023061|gb|EDU61101.1| hypothetical protein PROSTU_00847 [Providencia stuartii ATCC 25827]
          Length = 217

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIP- 111
           L      T +    + ++  +       L   +RR        L  V+  I++I +SIP 
Sbjct: 9   LISGTIDTIIMTFVSAILGFIMGVPTGVLLYVTRRGQVMENTALYAVISAIVNIFRSIPF 68

Query: 112 --ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169
             +L +++    + +    G        AI  +    +  +   +  +L  +P  L E S
Sbjct: 69  IILLVWISPFTKFLVGSAIG-----IEGAIVPLTVGAIPFIARMVENTLLEVPSGLIEAS 123

Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           R+   +  Q    + +P S+PG++    +++
Sbjct: 124 RAMGATPLQIIQKVLLPESLPGIINAATITL 154



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 50/168 (29%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPA---NVFF 434
           T+    V  I+  I+ +P G+ +             + + I     +  + P     V+ 
Sbjct: 16  TIIMTFVSAILGFIMGVPTGVLLYVTRRGQVMENTALYAVISAIVNIFRSIPFIILLVWI 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E + +   T  +  
Sbjct: 76  SPFTKFLVGSAIGIEGAIVPLTV-GAIPFIARMVENTLLEVPSGLIEASRAMGATPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           + ++LP   P  +  A          S +      G +       G Y
Sbjct: 135 QKVLLPESLPGIINAATITLIMLVGYSAMGGAVGSGGLGQIAMQYGYY 182


>gi|167894262|ref|ZP_02481664.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
          Length = 261

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 9/201 (4%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           A R    +  ++  ++           +S  L   L+P+L+++Q+IP +      +    
Sbjct: 54  AIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLA 113

Query: 125 NLYPGKVIGAELA--------AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
            L     + A L         A+ A+F   +  +  S+      +P  + E + +  ++G
Sbjct: 114 ILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSLVVGFAQVPAAVVEAALAMGMTG 173

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235
            ++   + +P ++P ++  + + +        VA+ +   G       GIG      +  
Sbjct: 174 RERLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLL 233

Query: 236 QDLLAILYAMLTMLGVIFLYD 256
             L  I  A++T +      D
Sbjct: 234 GALPTIALALVTAVLFEAATD 254



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446
           +  V   +  A  + +P+GI       +   + P   ++   P+   + L+++ ++    
Sbjct: 58  LALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNVVQTIPSIALYGLLMAPLAILAA 117

Query: 447 NPNL------------WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
              L               + +       I+ +++ G +  P    E A +  +TG    
Sbjct: 118 RVPLAARLGVSGIGVAPALIALFLYALLPIVSSLVVGFAQVPAAVVEAALAMGMTGRERL 177

Query: 495 RYIILPGIFPYYVTGAITACGGAWNAS-IVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
             I LP   P  ++G           + + + +   G       G+G    +    G+ P
Sbjct: 178 VAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALP 237

Query: 554 EVVLGVLIMCCFVLALN 570
            + L ++    F  A +
Sbjct: 238 TIALALVTAVLFEAATD 254


>gi|319941525|ref|ZP_08015852.1| phosphate ABC transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804999|gb|EFW01838.1| phosphate ABC transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 283

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
           R + +++I     + G+ +  AW ++ +       +D++    +    +     L + A 
Sbjct: 19  RAAVLINIAALLGIIGLIVVNAWPAMTWEFLTEPPRDLMTKGGI-LPCIIGTFCLALGAL 77

Query: 399 IIWIPVGIWIGFR------PHISSKIQPF-AQLLAAFPANVFFPL-VVSCVSYYHLNPNL 450
           +I +P+G+           P +   +       LA  P+ VF    +   V +     +L
Sbjct: 78  VIALPLGVASAVYLKEYSQPSVWVTLTRLSIANLAGVPSIVFGLFGLTFFVVFCGFGVSL 137

Query: 451 WLSLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509
              +L +      I+ N   A  S  P D++E + +   +       ++LP   P  +TG
Sbjct: 138 LSGILTLAVLSLPIIINTTEAALSQIPQDWREASLALGASQRETTLKVVLPNALPGILTG 197

Query: 510 AITACGGA 517
           +I A   A
Sbjct: 198 SILALARA 205



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 74/185 (40%), Gaps = 5/185 (2%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
           L+    ++GII +++           + +     +    +      T    L A+VI+L 
Sbjct: 23  LINIAALLGIIGLIVVNAWPAMTWEFLTEPPRDLMTKGGILPCIIGTFCLALGALVIALP 82

Query: 82  FTFVYA-TLAAKSRRLGMVLVPILDI--MQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138
                A  L   S+    V +  L I  +  +P + F  F + +F+      V  + L+ 
Sbjct: 83  LGVASAVYLKEYSQPSVWVTLTRLSIANLAGVPSIVFGLFGLTFFVVFCGFGV--SLLSG 140

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
           I  +    +  +  +   +L  IP+D  E S +   S  +    + +P ++PG++   ++
Sbjct: 141 ILTLAVLSLPIIINTTEAALSQIPQDWREASLALGASQRETTLKVVLPNALPGILTGSIL 200

Query: 199 SMSGG 203
           +++  
Sbjct: 201 ALARA 205


>gi|296283971|ref|ZP_06861969.1| phosphate ABC transporter permease [Citromicrobium bathyomarinum
           JL354]
          Length = 421

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 73  LSAMVISLLFTFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125
           +  M+++L   F    L+A          R   ++   ++ + ++P + F    +  F+ 
Sbjct: 207 ILTMIVTLALAFPIGVLSALYLEEYAPKNRWTDIIEVSINNLAAVPSIIFGLLGLAVFLW 266

Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185
           ++P       +  +  +    +  +  S   ++  +P  + + + +   S  Q  ++  +
Sbjct: 267 IFPNMRSAPLVGGM-TLALMTMPVIVISGRNAIKAVPPSIRDGALAVGASPVQVVFHHVL 325

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P ++PG++   ++ M+  
Sbjct: 326 PLALPGILTGTIIGMARA 343



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 14/139 (10%)

Query: 391 VVLIIIASIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443
           ++ +I+   +  P+G+               +  I+     LAA P+ +F   ++    +
Sbjct: 207 ILTMIVTLALAFPIGVLSALYLEEYAPKNRWTDIIEVSINNLAAVPSIIFG--LLGLAVF 264

Query: 444 YHLNPNLWLSLLM-----IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498
             + PN+  + L+        T   I+ +      A P   ++ A +   +  +   + +
Sbjct: 265 LWIFPNMRSAPLVGGMTLALMTMPVIVISGRNAIKAVPPSIRDGALAVGASPVQVVFHHV 324

Query: 499 LPGIFPYYVTGAITACGGA 517
           LP   P  +TG I     A
Sbjct: 325 LPLALPGILTGTIIGMARA 343


>gi|256045998|ref|ZP_05448870.1| ABC transporter membrane protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 191

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427
           V H    +   +      T+  V+  +++ S + I   I +   P     + P      A
Sbjct: 28  VVHALVANARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQA 87

Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487
            P     P++   + Y   +  + +++LMIF   + ++     G         E A    
Sbjct: 88  IPIFALAPILTLWLGYGPAS-KIAVAVLMIF---FPVVSTFFDGMRCTETGLIEAAEILG 143

Query: 488 ITGWRWWRYIILPGIFPYYVT 508
                    I +P  FP   +
Sbjct: 144 AGRMAILFRIRIPSAFPALAS 164



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 57  DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116
           +   + + A+ T   +L  +V+        A     S     +++P++   Q+IPI    
Sbjct: 35  NARLIAENAAATIGEVLGGLVLGSAVGIAAAIGLMMSPLAQRLVMPVMVFSQAIPIFALA 94

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
               ++       K+  A L   F + ++         +  +      L E +       
Sbjct: 95  PILTLWLGYGPASKIAVAVLMIFFPVVST--------FFDGMRCTETGLIEAAEILGAGR 146

Query: 177 WQKFWYLGVPFSMPGL 192
               + + +P + P L
Sbjct: 147 MAILFRIRIPSAFPAL 162


>gi|218134746|ref|ZP_03463550.1| hypothetical protein BACPEC_02649 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990131|gb|EEC56142.1| hypothetical protein BACPEC_02649 [Bacteroides pectinophilus ATCC
           43243]
          Length = 264

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 87/223 (39%), Gaps = 4/223 (1%)

Query: 10  FISRRIFPNIFDLLAFVLVIG-IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68
            +SRR     + +   + V   ++ ++ +   + T    + +++    D ++L      +
Sbjct: 4   VLSRRSLGIPYGIFLLIFVAAPLLVLVYYAFTDGTGQFTMANLLNFFTDPNTL-GTLCYS 62

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +  +   ++ LL  +  A +  +S      ++ +L ++            +   ++L  
Sbjct: 63  FVLAIVTTLVCLLIAYPAAYILTQSHFRRTGVIIMLFVLPMWINFTLRITALKEILSLVE 122

Query: 129 GKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           G +     L  +  +    +  M   +Y +L  + R++ E +       +Q F  + +P 
Sbjct: 123 GNLAFYPFLNTVIGMTYDFLPFMILPLYTTLSRLDRNVIEAASDLGADNFQTFTRVILPL 182

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
           S+PG+V  + M         V  +M+     ++    IGSY A
Sbjct: 183 SVPGIVSGVSMVFLPAMTNYVVLDMLYNSTYIMGSL-IGSYFA 224



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 70/223 (31%), Gaps = 12/223 (5%)

Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------WLGC 384
              + S + +     IF    V    + + + +       FT  ++L            C
Sbjct: 1   MKNVLSRRSLGIPYGIFLLIFVAAPLLVLVYYAFTDGTGQFTMANLLNFFTDPNTLGTLC 60

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA-----AFPANVFFPLVVS 439
            +    +V  ++  +I  P    +       + +     +L               ++  
Sbjct: 61  YSFVLAIVTTLVCLLIAYPAAYILTQSHFRRTGVIIMLFVLPMWINFTLRITALKEILSL 120

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                   P L   + M +    +++  +    S    +  E AS      ++ +  +IL
Sbjct: 121 VEGNLAFYPFLNTVIGMTYDFLPFMILPLYTTLSRLDRNVIEAASDLGADNFQTFTRVIL 180

Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
           P   P  V+G       A    +V ++  +   ++  + +G+Y
Sbjct: 181 PLSVPGIVSGVSMVFLPAMTNYVVLDML-YNSTYIMGSLIGSY 222


>gi|199597245|ref|ZP_03210676.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229551750|ref|ZP_04440475.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258507903|ref|YP_003170654.1| phosphate ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258539149|ref|YP_003173648.1| phosphate ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|199591761|gb|EDY99836.1| ABC-type phosphate transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229314881|gb|EEN80854.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257147830|emb|CAR86803.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257150825|emb|CAR89797.1| ABC transporter, phosphate transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259649230|dbj|BAI41392.1| phosphate ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 294

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   ++ AM+IS   +          AK   L  V+   ++I+ S+P +    F  +
Sbjct: 62  LFNSFYLLVLAMLISTPISLGAGIYLSEYAKKNWLTDVIRTSIEILSSLPSVVVGLFGFL 121

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
            F+  +  K   + L+   A+    +  +T ++  SL  +  +  E   +  LS W+   
Sbjct: 122 IFVLQF--KFGFSILSGALALTVFNLPLLTRNVEDSLRGVGFEQREAGLALGLSRWETVL 179

Query: 182 YLGVPFSMPGLVWNMMMSMS 201
           ++ +P ++PG++  M++   
Sbjct: 180 HVVIPEALPGIITGMILGAG 199



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 71/196 (36%), Gaps = 21/196 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIA 397
           V Y++      ++  +   I ++ + +I  HF  +            I +F    L+++A
Sbjct: 13  VLYIVSGIIIVILASLLGYILFKGVPHISWHFLTSPAQSFEAGGGIGIQLFNSFYLLVLA 72

Query: 398 SIIWIPVGIWIGFR-------PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
            +I  P+ +  G           ++  I+   ++L++ P+     +VV    +       
Sbjct: 73  MLISTPISLGAGIYLSEYAKKNWLTDVIRTSIEILSSLPS-----VVVGLFGFLIFVLQF 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIF 503
                ++ G     +FN+        +  +       E   +  ++ W    ++++P   
Sbjct: 128 KFGFSILSGALALTVFNLPLLTRNVEDSLRGVGFEQREAGLALGLSRWETVLHVVIPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG I   G  + 
Sbjct: 188 PGIITGMILGAGRVFG 203


>gi|167750374|ref|ZP_02422501.1| hypothetical protein EUBSIR_01348 [Eubacterium siraeum DSM 15702]
 gi|167656734|gb|EDS00864.1| hypothetical protein EUBSIR_01348 [Eubacterium siraeum DSM 15702]
          Length = 340

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 26/216 (12%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402
           +L I  + ++ G           ++     Y        L  I     V   + A +I +
Sbjct: 60  VLMITIYMIISGAPAIGKIGLTDFLFGDTWYAKKEQFGILPLI--LTSVFGTLGAIVIGV 117

Query: 403 PVGIWIGFR------PHISSKIQPFAQLLAAFP--------ANVFFPLVVSCVSYYHLNP 448
           P+G+             + + ++P  +LLA  P        AN+  PL+ +     + N 
Sbjct: 118 PIGLLTAVFLSELAPKAMKNVVKPAVELLAGIPSVIYGLLGANLVKPLMYALEEVIYAND 177

Query: 449 ---------NLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYII 498
                    NL  +++++       + N+     SA P++++E +     T  +    ++
Sbjct: 178 PTHQFTGGANLASAIIVLAIMILPTIINISENAISAVPSEYREASYGLGATRIQTIFKVV 237

Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534
           +P       +G +   G A   ++   + +    ++
Sbjct: 238 IPAAKSGIASGVVLGVGRAIGEAMAIILVAGNSANM 273



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 63/168 (37%), Gaps = 16/168 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP-------------ILG 114
           T   ++  + I LL     + LA   + +  V+ P ++++  IP              L 
Sbjct: 109 TLGAIVIGVPIGLLTAVFLSELA--PKAMKNVVKPAVELLAGIPSVIYGLLGANLVKPLM 166

Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFR 173
           +    V+Y  +       GA LA+   +    +     ++ + ++  +P +  E S    
Sbjct: 167 YALEEVIYANDPTHQFTGGANLASAIIVLAIMILPTIINISENAISAVPSEYREASYGLG 226

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221
            +  Q  + + +P +  G+   +++ +       +A  ++      +P
Sbjct: 227 ATRIQTIFKVVIPAAKSGIASGVVLGVGRAIGEAMAIILVAGNSANMP 274


>gi|157369639|ref|YP_001477628.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
 gi|157321403|gb|ABV40500.1| binding-protein-dependent transport systems inner membrane
           component [Serratia proteamaculans 568]
          Length = 222

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 18/213 (8%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA--------AKSRRLGMVLVPILDI 106
            L +  L      T      A + +L+   V   L          ++R +  ++  ++++
Sbjct: 8   HLRIDQLLNATWETLYMTGIAGLATLVLGIVLGVLLFLTSRGQLLQNRAVYSLISVLVNV 67

Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166
            +SIP    L   ++ F     G ++GA+ AA+ A+           +   L  + + + 
Sbjct: 68  FRSIP-FIILIVLLIPFTKTLIGTILGAD-AALPALIVGAAPFYARLVEIGLREVDKGVI 125

Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226
           E +RS         + + +P S P LV  + ++       ++A         VI   G+G
Sbjct: 126 EAARSMGAKTSTIIFRVLLPESSPALVSGITVT-------LIALVSYTAMAGVIGAGGLG 178

Query: 227 SYI-ALAIKEQDLLAILYAMLTMLGVIFLYDQL 258
           +       +       L A LT+L ++F+   +
Sbjct: 179 NLAYLEGFQRNHGDVTLVATLTILLIVFVIQFI 211



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 16/196 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++   +  +   ++ I +G+ +             + S I     +  + P  +   L+
Sbjct: 21  TLYMTGIAGLATLVLGIVLGVLLFLTSRGQLLQNRAVYSLISVLVNVFRSIPFIILIVLL 80

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +    L  +  L  L++    +Y    V  G         E A S         
Sbjct: 81  IPFTKTLIGTILGADAALPALIVGAAPFYARL-VEIGLREVDKGVIEAARSMGAKTSTII 139

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             ++LP   P  V+G         + + ++ V   G +       G         G    
Sbjct: 140 FRVLLPESSPALVSGITVTLIALVSYTAMAGVIGAGGLGNLAYLEGFQ----RNHGDVTL 195

Query: 555 VVLGVLIMCCFVLALN 570
           V    +++  FV+   
Sbjct: 196 VATLTILLIVFVIQFI 211


>gi|317153613|ref|YP_004121661.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943864|gb|ADU62915.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 588

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 56/433 (12%), Positives = 135/433 (31%), Gaps = 37/433 (8%)

Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209
           M   +   + +IP+ L E S S  L+  Q    + +P S   ++  +             
Sbjct: 152 MAEIIRAGIQSIPKGLLEASYSSGLNFSQTLRKIILPLSFREIIPPLGSEFLNNMKNTSL 211

Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
           +  I V +    +  + S      +   +   +Y+ L++     L             N 
Sbjct: 212 AMTIGVAELCWSMQEVYSLTYHTFEAMTVATAVYSCLSLSIAGIL-------------NL 258

Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329
             +         + ++  +         +  +                +TL ++R     
Sbjct: 259 VNIRLKILPKGQEPFLRKIADFIFLPLNLLGNGLEHILWHFRKAPDATKTLSLMRRMLRF 318

Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTYQDVLYVIWLGC 384
           +   L  + +  ++  + +     G+A+      I W ++  ++            + G 
Sbjct: 319 SGKGLTLSSKGLFVAVLAYLTYKTGLAVAGFNFEIIWSNLPTLLIWRFPDGDPTEFFHGL 378

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF-----AQLLAAFP---ANVFFPL 436
             +   V++ +I+ I    +G+ +G      ++I         + + + P      +   
Sbjct: 379 GGLSGSVLIAVISIIGSFFIGLLVGMGRTAKNRIFRIPSTVYIEFVRSIPLILVIFWTNT 438

Query: 437 VVSCVSYYHLNPNLW---LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493
           V+  + +       W   ++L   F    YI   V  G    P    E A++  +  ++ 
Sbjct: 439 VIFGIVFKIDIQTFWAGTIALTFFFAA--YIAETVRGGIENIPVGQVEAATASGLGYFQI 496

Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553
            R IILP      +   +     A+  + +  +     +      +   I        +P
Sbjct: 497 MRKIILPQALKQMLPALVGMFIAAFKDTSLVYIIGVTELTRAAYAINNRIMI------YP 550

Query: 554 EVVLGVLIMCCFV 566
             +   + M  FV
Sbjct: 551 FEIFTTVAMLYFV 563


>gi|260222891|emb|CBA32911.1| hypothetical protein Csp_B16400 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 267

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 68/176 (38%), Gaps = 4/176 (2%)

Query: 49  VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108
           +D +   L+   + +  + + L     M+ +++         A+    G     +L +M 
Sbjct: 51  LDTMRFFLNYAGVWKAVTSSVLVAALTMLFAVILGAPAGYALARYDFTGQTAYRLLVVMT 110

Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEE 167
               L  L   +V     +    +      +  + T+     +  +  SL   IPR+LEE
Sbjct: 111 RAFPLAILALPLV---TRFISVGLYDTHLGVALVHTALALPFSILVSSSLFMGIPRELEE 167

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223
            + +   S  Q F  + +P ++PG+   M+ S    W  V A+ ++ + +  +   
Sbjct: 168 AAWTLGCSRLQAFMKIVLPLALPGMAATMIFSFVISWNEVFAASVLTLNNRTLTAF 223



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 2/153 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL-AAFP-ANVFFPLVVSCVSY 443
           ++    + ++ A I+  P G  +               ++  AFP A +  PLV   +S 
Sbjct: 70  SVLVAALTMLFAVILGAPAGYALARYDFTGQTAYRLLVVMTRAFPLAILALPLVTRFISV 129

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              + +L ++L+       + +    +     P + +E A +   +  + +  I+LP   
Sbjct: 130 GLYDTHLGVALVHTALALPFSILVSSSLFMGIPRELEEAAWTLGCSRLQAFMKIVLPLAL 189

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536
           P      I +   +WN    + V +  +  L  
Sbjct: 190 PGMAATMIFSFVISWNEVFAASVLTLNNRTLTA 222


>gi|271969378|ref|YP_003343574.1| proline/glycine/betaine ABC transporter membrane spanning protein
           [Streptosporangium roseum DSM 43021]
 gi|270512553|gb|ACZ90831.1| ABC transporter membrane spanning protein (proline/glycine/betaine)
           [Streptosporangium roseum DSM 43021]
          Length = 220

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            +  L  +VI LL          + R L    V +++++ S+P L         F+ L P
Sbjct: 27  VVMALVPIVIGLLVALPLGLAGVRWRWLYQPTVGVMNVIYSLPSLA-------VFIVLIP 79

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
              +      +  +    +  +  ++   L ++P  + + + +   +  ++   + +P +
Sbjct: 80  VTGLATRTTVMVPLTFYAMAVLIPAVVDGLTSVPDHVRQSAVAMGFTPLRRLLQVELPIA 139

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
           +P ++  + ++        V+S  +V    ++   G+G       + Q
Sbjct: 140 VPVVLAGLRVA-------AVSSISLVSVGALVGRGGLGYLFIDGWQRQ 180



 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +V I+I  ++ +P+G+       +         ++ + P+   F +++           +
Sbjct: 31  LVPIVIGLLVALPLGLAGVRWRWLYQPTVGVMNVIYSLPSLAVFIVLIPVTGLATRTTVM 90

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
                            V+ G ++ P+  ++ A +   T  R    + LP   P  + G 
Sbjct: 91  VPLTFYAMAVLIP---AVVDGLTSVPDHVRQSAVAMGFTPLRRLLQVELPIAVPVVLAGL 147

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552
             A   + +   V  +   G       GLG    +  ++  +
Sbjct: 148 RVAAVSSISLVSVGALVGRG-------GLGYLFIDGWQRQFY 182


>gi|150376472|ref|YP_001313068.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150031019|gb|ABR63135.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 299

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 81/201 (40%), Gaps = 7/201 (3%)

Query: 62  PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PILGFLTFT 119
           P +   T L  + + ++SL  +   A    + R  G   V ++  +  +  P + F+   
Sbjct: 90  PGWLWNTMLVAVGSTILSLAASVFAAYAIERVRFTGARPVGLMIFLAYLVPPSILFIPLA 149

Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
            + F       +  ++LA IF   T  +   T+ +     +IP +LEE +     + WQ 
Sbjct: 150 FIVFKF----GIYDSKLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGATRWQI 205

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238
              + +P ++PGL+   + + +  W   + +   +       +P G+ + +      +  
Sbjct: 206 LVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQSSENKTVPVGVLTELVRGDVFEWG 265

Query: 239 LAILYAMLTMLGVIFLYDQLL 259
             +  A+   L V+ LY   +
Sbjct: 266 ALMAGALFGSLPVVILYSFFV 286



 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 12/173 (6%)

Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415
            +      I Y++   +Y   L+       TM   V   I++    +     I       
Sbjct: 72  VVSPTLDHIKYLLFETSYPGWLWN------TMLVAVGSTILSLAASVFAAYAIERVRFTG 125

Query: 416 SKIQPFAQLLAAF--PANVFFPLVVSCVSYYHLNPNLWLSLL--MIFGTQWYILFNVIAG 471
           ++       LA    P+ +F PL      +   +  L L              L      
Sbjct: 126 ARPVGLMIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLLMGYF- 184

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
             + P + +E A     T W+    IILP   P  ++  I A   +WN  I +
Sbjct: 185 -RSIPFELEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYA 236


>gi|160879628|ref|YP_001558596.1| molybdate ABC transporter, inner membrane subunit [Clostridium
           phytofermentans ISDg]
 gi|160428294|gb|ABX41857.1| molybdate ABC transporter, inner membrane subunit [Clostridium
           phytofermentans ISDg]
          Length = 221

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 23/197 (11%)

Query: 78  ISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL--------- 126
           +S++ TF     A K         +  I+D + ++P++  L  TV  F  L         
Sbjct: 15  LSIVITFFLGVAAGKMVYAMRNERIKIIIDGIFTLPMV--LPPTVAGFFLLYIFGVKRPI 72

Query: 127 -------YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179
                  +  K+  +  A + A  T     M  S   +L  +  +L    R+  +S W+ 
Sbjct: 73  GEFLLNQFAFKIAFSWWATVLAAVTISFPLMYRSARGALEQVDINLVYAGRTLGMSEWKI 132

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG--DTVIPLPGIGSYIALAIKEQD 237
           F  + +P ++PG++   ++S + G     A+ MI          LP I  Y A+A  + +
Sbjct: 133 FRSIILPNALPGILSGAILSFARGLGEFGATAMIAGNIAGKTRTLP-IAVYSAVAAGDMN 191

Query: 238 LLAILYAMLTMLGVIFL 254
           L      +L ++  I +
Sbjct: 192 LAYRYVIILVLISFIII 208



 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 2/132 (1%)

Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPG 501
            + +  + W ++L      + +++    GA      +      +  ++ W+ +R IILP 
Sbjct: 81  AFKIAFSWWATVLAAVTISFPLMYRSARGALEQVDINLVYAGRTLGMSEWKIFRSIILPN 140

Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561
             P  ++GAI +          + + + G+I  +T  L   +  +   G        V+I
Sbjct: 141 ALPGILSGAILSFARGLGEFGATAMIA-GNIAGKTRTLPIAVYSAVAAGDMNLAYRYVII 199

Query: 562 MCCFVLALNRFL 573
           +      +  F+
Sbjct: 200 LVLISFIIIAFM 211


>gi|91772770|ref|YP_565462.1| phosphate ABC transporter inner membrane protein [Methanococcoides
           burtonii DSM 6242]
 gi|91711785|gb|ABE51712.1| Phosphate import ABC transporter permease protein [Methanococcoides
           burtonii DSM 6242]
          Length = 297

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 66/164 (40%), Gaps = 8/164 (4%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTVV 121
           + +    A+V+S+      A   ++    ++  ++ P ++I+  IP + +    L   V 
Sbjct: 73  SLIVTAGAIVLSVPLGIASAIYISELADPKIAQLIKPFVEILAGIPSVVYGFFGLIVVVP 132

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
              +L         LA    +    +  +      ++ ++P  L+E S +   + WQ  +
Sbjct: 133 LLQDLLDLPTGQTALAGSIMLGMMALPTIISVSEDAINSVPTALKEGSLALGSTKWQTIY 192

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225
            + +P ++ G+   +M+ +       +   M+     +I  PGI
Sbjct: 193 RVVLPAALSGISAAVMLGIGRAIGETMTVMMVTGNTAII--PGI 234



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 66/190 (34%), Gaps = 14/190 (7%)

Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-- 411
           G  +   +  I ++     Y       +     +   +++   A ++ +P+GI       
Sbjct: 37  GYLLFGDYSIISFLTETSWYPSSSPAKFGLLPLLTGSLIVTAGAIVLSVPLGIASAIYIS 96

Query: 412 ----PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYH-----LNPNLWLSLLMIFGT 460
               P I+  I+PF ++LA  P+ V+  F L+V                     +M+   
Sbjct: 97  ELADPKIAQLIKPFVEILAGIPSVVYGFFGLIVVVPLLQDLLDLPTGQTALAGSIMLGMM 156

Query: 461 QWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
               + +V     ++ P   KE + +   T W+    ++LP          +   G A  
Sbjct: 157 ALPTIISVSEDAINSVPTALKEGSLALGSTKWQTIYRVVLPAALSGISAAVMLGIGRAIG 216

Query: 520 ASIVSEVASW 529
            ++   + + 
Sbjct: 217 ETMTVMMVTG 226


>gi|150392304|ref|YP_001322353.1| phosphate ABC transporter, inner membrane subunit PstC
           [Alkaliphilus metalliredigens QYMF]
 gi|149952166|gb|ABR50694.1| phosphate ABC transporter, inner membrane subunit PstC
           [Alkaliphilus metalliredigens QYMF]
          Length = 310

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 20/213 (9%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV-- 121
           + +  L A+ IS+      A   A+    +   VL  I++ + +IP  +LGFL   ++  
Sbjct: 90  SVMVTLGAVFISVPLGIGSAIFIAEVAPPKTKTVLKVIIEFLSAIPSVVLGFLGIVILSS 149

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +    +        L     +    +  +      +L  +P++  E S +   + W+   
Sbjct: 150 WVRVTFNISSGFTILTGSILVSFMALPTIISISDDALNALPKEYREASLALGATRWETIL 209

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI--------------GS 227
           Y  VP +  G++  +M+ +       +   M+      IP   +              G 
Sbjct: 210 YALVPAASSGIIAAVMLGIGRAVGETMTVMMVTGNAAQIPGSFLVSGRTMTATIAAEMGD 269

Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260
            +        L A+   +L M   I L    + 
Sbjct: 270 TVRNGTHYHALFAVGIVLLAMTSFINLIADFVL 302



 Score = 46.5 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 14/212 (6%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399
           ++ +  IF F    G+ +        ++   F +   +   +     +   V++ + A  
Sbjct: 40  IAIIALIFLFLFRTGIRLFDDIALKDFLFGEFWFPISVNSQYGILPLVAGSVMVTLGAVF 99

Query: 400 IWIPVGIWIGFR------PHISSKIQPFAQLLAAFPANVFFPLVVSCVS--------YYH 445
           I +P+GI           P   + ++   + L+A P+ V   L +  +S           
Sbjct: 100 ISVPLGIGSAIFIAEVAPPKTKTVLKVIIEFLSAIPSVVLGFLGIVILSSWVRVTFNISS 159

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505
               L  S+L+ F     I+       +A P +++E + +   T W    Y ++P     
Sbjct: 160 GFTILTGSILVSFMALPTIISISDDALNALPKEYREASLALGATRWETILYALVPAASSG 219

Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
            +   +   G A   ++   + +     +  +
Sbjct: 220 IIAAVMLGIGRAVGETMTVMMVTGNAAQIPGS 251


>gi|302547746|ref|ZP_07300088.1| sugar ABC transporter, permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302465364|gb|EFL28457.1| sugar ABC transporter, permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 382

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW----NMTFSMYQSLCNIPRDLEE 167
             GF+  T+   + +     +     A+FA+    VW            +L  +P +  E
Sbjct: 219 PDGFIDATMQSTIGVNAPNFLADGTWAMFAVVAMSVWAGFGYNMLIFSAALDAVPDNQLE 278

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227
            ++    S WQ FW +  P   P + +  MM++   +       ++  G        +  
Sbjct: 279 AAQIDGASAWQVFWRIKFPAISPSIFFATMMTLITSFQVFTQPFLLTKGGPGTETETLVQ 338

Query: 228 YIA----LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264
           YI        +     A  + +  ++  I     L  +  +
Sbjct: 339 YIYNTGFQTQQLGLASAGAWVLFVIILGITAVQFLGQKRWV 379



 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 89/294 (30%), Gaps = 50/294 (17%)

Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLGC 384
             P          R S+   +F      G+AI      +   +V+   +  +    W G 
Sbjct: 84  REPGERSGRRQIGRRSWWGAVFATPHSLGLAIFTVVPIVASLVVSFMNWPMLGEHSWTGL 143

Query: 385 ---------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP------FAQLLAAFP 429
                     T + V    +   ++++P+ + +     +++ + P        ++L   P
Sbjct: 144 DNYRKLFSDQTFWIVARNTVEYVVLYVPLNLVVSL--GLAAWLTPRIRHRHIFRVLFFIP 201

Query: 430 ANVFFPLVVSCVSY-----------------------YHLNPNLWLSLLMIFGTQW---- 462
                PLV + V +                         L    W    ++  + W    
Sbjct: 202 TI--TPLVANVVVWRMLYQPDGFIDATMQSTIGVNAPNFLADGTWAMFAVVAMSVWAGFG 259

Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522
           Y +    A   A P++  E A     + W+ +  I  P I P      +     ++    
Sbjct: 260 YNMLIFSAALDAVPDNQLEAAQIDGASAWQVFWRIKFPAISPSIFFATMMTLITSFQVFT 319

Query: 523 VSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEVVLGVLIMCCFVLALNRFL 573
              + + G     T  L  YI  +   T++         VL +    +   +FL
Sbjct: 320 QPFLLTKGGPGTETETLVQYIYNTGFQTQQLGLASAGAWVLFVIILGITAVQFL 373


>gi|218515206|ref|ZP_03512046.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium etli 8C-3]
          Length = 94

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            I++P  FP  +TG       AW   I +E+     +     GLG +I E+      P V
Sbjct: 3   RILVPAAFPSILTGLKIGWAFAWRTLIAAELVFG--VSSGQGGLGWFIFENRNLLDIPAV 60

Query: 556 VLGVLIMCCFVLALNRFLWH 575
             G+L +    L +   ++ 
Sbjct: 61  FAGLLTVIIIGLIVENLVFQ 80



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239
              + VP + P ++  + +  +  W  ++A+E++    +     G+G +I       D+ 
Sbjct: 1   MLRILVPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSS--GQGGLGWFIFENRNLLDIP 58

Query: 240 AILYAMLTMLGVIFLYDQLLFR 261
           A+   +LT++ +  + + L+F+
Sbjct: 59  AVFAGLLTVIIIGLIVENLVFQ 80


>gi|189465555|ref|ZP_03014340.1| hypothetical protein BACINT_01913 [Bacteroides intestinalis DSM
           17393]
 gi|189437829|gb|EDV06814.1| hypothetical protein BACINT_01913 [Bacteroides intestinalis DSM
           17393]
          Length = 257

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            L   +V+ ++ I+++   +        +     +   ++      +    +   +  LL
Sbjct: 13  FLIIFVVMPLLLIVIYAFTDAEGAFTFANFRKFMMHPEAI-NTFVYSIGIAVITTLACLL 71

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL----- 136
             +  A + ++ R          +  Q++ +L  L   V   +       +   L     
Sbjct: 72  LGYPAAYILSQKR---------FNTSQTMVVLFILPMWVNILIRTLATVALFDFLNLPLG 122

Query: 137 --AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194
             A +F +  + +  M + +Y +L  +   L E ++    +  Q F  + +P SMPG++ 
Sbjct: 123 EGALVFGMVYNFLPFMIYPIYNTLQKMDGSLIEAAQDLGATPVQVFGKVILPLSMPGIMS 182

Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254
            ++M           +E++ + +  +     G+ +   I            L ML +I +
Sbjct: 183 GVVMVFMPTVSTFAIAELLTMNNIKLF----GTTVQENIYNGMWNYGAALSLIMLLLIGV 238

Query: 255 YDQL 258
               
Sbjct: 239 TALF 242


>gi|148253284|ref|YP_001237869.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405457|gb|ABQ33963.1| carbohydrate ABC transporter membrane protein 2, CUT1 family
           [Bradyrhizobium sp. BTAi1]
          Length = 274

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 7/202 (3%)

Query: 64  YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123
           Y   + L    A  +++L         A+       +  ++ I +  P L +L    + F
Sbjct: 70  YFKNSLLVTGGATALAMLVGVPAGYGIARMAAHKSAI--VILIARITPGLSYLIPLFLLF 127

Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183
             L    ++G     I       V  + + M       P +LEE +R    + WQ F ++
Sbjct: 128 QWLG---LLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQVFRHV 184

Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243
            +P + PGL    ++++   W   V    IV+         +  Y  ++  +     +  
Sbjct: 185 ALPVAKPGLAVAFILAVIFSWNNFVFG--IVLAGRETRTLPVAVYNMISFDQLSWGPLAA 242

Query: 244 AMLTMLGVIFLYDQLLFRPMIV 265
           A L +   + L      R ++ 
Sbjct: 243 AALIVTLPVLLLTVFAQRQIVA 264



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 5/191 (2%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445
           ++        +A ++ +P G  I       S I     +    P   +   +     +  
Sbjct: 74  SLLVTGGATALAMLVGVPAGYGIARMAAHKSAI--VILIARITPGLSYLIPLFLLFQWLG 131

Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504
           L   LW  +++       I+  ++ G     P + +E A     T W+ +R++ LP   P
Sbjct: 132 LLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQVFRHVALPVAKP 191

Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564
                 I A   +WN  +   V +          +  Y   S ++ S+  +    LI+  
Sbjct: 192 GLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAV--YNMISFDQLSWGPLAAAALIVTL 249

Query: 565 FVLALNRFLWH 575
            VL L  F   
Sbjct: 250 PVLLLTVFAQR 260


>gi|312797486|ref|YP_004030408.1| transporter [Burkholderia rhizoxinica HKI 454]
 gi|312169261|emb|CBW76264.1| Transporter [Burkholderia rhizoxinica HKI 454]
          Length = 632

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 56/153 (36%), Gaps = 7/153 (4%)

Query: 55  TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPIL 113
            ++  +L +  + +      A ++          L ++SR R   VL  ++ +  ++P L
Sbjct: 48  AIEPGALAEATAVSVGSATLATLLIAFTGIPLGYLLSRSRSRWASVLGFVMQLPLALPPL 107

Query: 114 G------FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167
                  FL         L  G +  + +  + A        +  +   +  ++   L++
Sbjct: 108 SSGVLLLFLLGPYSPLGTLAGGGLTDSFVGVVLAQTFVAAPFLIVAARSAFDSVDPVLDD 167

Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
           V+ +       +   + +P + P +   M+++ 
Sbjct: 168 VAATLGHDARTRLLRVWLPIAWPSIRAGMVLAW 200



 Score = 46.5 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 13/175 (7%)

Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANV- 432
           +   +     +++    +  ++ +   IP+G  +       +S +    QL  A P    
Sbjct: 50  EPGALAEATAVSVGSATLATLLIAFTGIPLGYLLSRSRSRWASVLGFVMQLPLALPPLSS 109

Query: 433 ----------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482
                     + PL          +  + + L   F    +++    +   +      +V
Sbjct: 110 GVLLLFLLGPYSPLGT-LAGGGLTDSFVGVVLAQTFVAAPFLIVAARSAFDSVDPVLDDV 168

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537
           A++           + LP  +P    G + A   A+     + + ++    L   
Sbjct: 169 AATLGHDARTRLLRVWLPIAWPSIRAGMVLAWLRAFGEFGATVMVAYHPYSLPVY 223


>gi|261344712|ref|ZP_05972356.1| hypothetical protein PROVRUST_05970 [Providencia rustigianii DSM
           4541]
 gi|282567155|gb|EFB72690.1| D-methionine ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 217

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR--------LGMVLVPILDIMQSIPI 112
           L      T +    + ++  +       L   +RR        L  V+  ++++ +SIP 
Sbjct: 9   LISGTIDTIIMTFVSAILGFILGIPTGVLLYVTRRGQVMENTALYSVISAVVNVFRSIP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   +  F     G  IG E  AI  +    +  +   +  +L  +P  L E SR+ 
Sbjct: 68  FIILLVWISPFTKFIVGSAIGIE-GAIVPLTVGAIPFIARMVENALLEVPSGLIEASRAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             +  Q    + +P S+PGL+    +++
Sbjct: 127 GATPLQIISKVLLPESLPGLINAATITL 154



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 49/168 (29%), Gaps = 12/168 (7%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH--------ISSKIQPFAQLLAAFPA---NVFF 434
           T+    V  I+  I+ IP G+ +             + S I     +  + P     V+ 
Sbjct: 16  TIIMTFVSAILGFILGIPTGVLLYVTRRGQVMENTALYSVISAVVNVFRSIPFIILLVWI 75

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
                 +    +     +  L + G   +I   V       P+   E + +   T  +  
Sbjct: 76  SPFTKFIVGSAIGIEGAIVPLTV-GAIPFIARMVENALLEVPSGLIEASRAMGATPLQII 134

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542
             ++LP   P  +  A          S +      G +       G Y
Sbjct: 135 SKVLLPESLPGLINAATITLIMLVGYSAMGGAVGSGGLGQIAMQYGYY 182


>gi|148642626|ref|YP_001273139.1| phosphate ABC transporter, permease component, PstA
           [Methanobrevibacter smithii ATCC 35061]
 gi|148551643|gb|ABQ86771.1| phosphate ABC transporter, permease component, PstA
           [Methanobrevibacter smithii ATCC 35061]
          Length = 282

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 8/206 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY---VIWLGCITMFRVVVLIII 396
           +S ++ +     + G  +      I +     +  D      +  +   +++ V +  II
Sbjct: 20  LSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPMIISSIYVVFIAAII 79

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWL 452
           A+ + +   I++        +   I+  ++ LA+ P+ VF    ++    +  L   +  
Sbjct: 80  ATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILS 139

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++       +F V     S+ PN +KE       T W+    +ILP   P  +TG I
Sbjct: 140 GGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVI 199

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            A   A + +     A    I +  +
Sbjct: 200 LAMTRAISEAAAVMYAVGSAITVPVS 225



 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 9/218 (4%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQY 64
            P  S++I   +F L   + ++ ++ IL + + +     +   +    +D      +   
Sbjct: 6   SPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPM 65

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   +  A +I+       A      A ++++   +    + + SIP + F  F + 
Sbjct: 66  IISSIYVVFIAAIIATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLA 125

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+     K+    L+    +    +  +      +L +IP   +E       + WQ  +
Sbjct: 126 FFVVFL--KLGWCILSGGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIY 183

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            + +P ++PG++  ++++M+       A+ M  VG  +
Sbjct: 184 SVILPAALPGIITGVILAMTRA-ISEAAAVMYAVGSAI 220


>gi|17227816|ref|NP_484364.1| sulfate transport system permease protein [Nostoc sp. PCC 7120]
 gi|17129665|dbj|BAB72278.1| sulfate transport system permease protein [Nostoc sp. PCC 7120]
          Length = 291

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 18/198 (9%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDI--------VDIVPITLDVHSLPQYASRTTLRMLSA 75
               ++  + I    + +     ++        V      L        A  T L  L A
Sbjct: 26  WVPTILIFVAIAYLALIQYIPAINVFVQAFSKGVGPFLENLTHSDFLSAARLTVLLALIA 85

Query: 76  MVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSI-PILGFLTFTVVYFMNLYPGKVIG 133
           + ++ +F    A   A+ +     +++ I+D+  SI P++  L   ++Y  N + G ++ 
Sbjct: 86  VPLNTVFGLCAAWAIARHKFPGRALVLSIIDLPFSISPVVAGLMLVLLYGRNGWFGTLLE 145

Query: 134 AELAAIFAIFTSQVWNMTF--SMYQSLCNIP------RDLEEVSRSFRLSGWQKFWYLGV 185
           A    I   F   V    F    + +   IP      +D EE +++   + WQ FW + +
Sbjct: 146 ANDIRIIFAFPGMVLATAFVSMPFVAREVIPVLEEFGKDQEEAAKTLGANEWQTFWRVTL 205

Query: 186 PFSMPGLVWNMMMSMSGG 203
           P    GL++ ++++ +  
Sbjct: 206 PGIRWGLLYGVILTNARA 223



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 68/212 (32%), Gaps = 22/212 (10%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383
                 +  ++   Q+ S++  I  F  +  +A+     +I   V  F+     ++  L 
Sbjct: 8   PHSSGTDTGKIKPPQKKSWVPTILIFVAIAYLALIQYIPAINVFVQAFSKGVGPFLENLT 67

Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHIS---------SKIQPFAQLLAAFPANV-- 432
                    L ++ ++I +P+    G     +         + +     L  +    V  
Sbjct: 68  HSDFLSAARLTVLLALIAVPLNTVFGLCAAWAIARHKFPGRALVLSIIDLPFSISPVVAG 127

Query: 433 -----------FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481
                      +F  ++       +     + L   F +  ++   VI     F  D +E
Sbjct: 128 LMLVLLYGRNGWFGTLLEANDIRIIFAFPGMVLATAFVSMPFVAREVIPVLEEFGKDQEE 187

Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
            A +     W+ +  + LPGI    + G I  
Sbjct: 188 AAKTLGANEWQTFWRVTLPGIRWGLLYGVILT 219


>gi|322372963|ref|ZP_08047499.1| phosphate ABC transporter, permease protein PstA [Streptococcus sp.
           C150]
 gi|321278005|gb|EFX55074.1| phosphate ABC transporter, permease protein PstA [Streptococcus sp.
           C150]
          Length = 300

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMVI 78
           ++A ++V  +  ++L+ +           +   +        +      +   ++  ++I
Sbjct: 22  VIAGIIVTILAALILYILVRGLPHISWSFLTSRSSSYKAGGGIGVQLYNSFFLLVITLII 81

Query: 79  SLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S+  +          AK  R+   +   ++I+ S+P +    F  + F+  +  +   + 
Sbjct: 82  SVPLSMGAGIYLSEYAKKGRVTNFVRTCIEILSSLPSVVVGLFGYLIFVVQF--QYGFSI 139

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+   A+    +  MT ++  SL  +     E   +  LS W+   Y+ VP ++PG+V  
Sbjct: 140 LSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICYVVVPEALPGIVTG 199

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPL 222
           ++++ SG  F   A+ +   G +   L
Sbjct: 200 IVLA-SGRIFGEAAALIYTAGQSAPAL 225



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 21/212 (9%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT--MFRVVVLIIIASII 400
           ++      ++  + + I  + + +I   F           G I   ++    L++I  II
Sbjct: 22  VIAGIIVTILAALILYILVRGLPHISWSFLTSRSSSYKAGGGIGVQLYNSFFLLVITLII 81

Query: 401 WIPV----GIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453
            +P+    GI++                 ++L++ P+     +VV    Y          
Sbjct: 82  SVPLSMGAGIYLSEYAKKGRVTNFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFQYG 136

Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIFPYY 506
             ++ G     +FN+        +  +       E   +  ++ W    Y+++P   P  
Sbjct: 137 FSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETICYVVVPEALPGI 196

Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTG 538
           VTG + A G  +  +      +         G
Sbjct: 197 VTGIVLASGRIFGEAAALIYTAGQSAPALNWG 228


>gi|304407965|ref|ZP_07389615.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus curdlanolyticus YK9]
 gi|304342984|gb|EFM08828.1| phosphate ABC transporter, inner membrane subunit PstA
           [Paenibacillus curdlanolyticus YK9]
          Length = 291

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 68/184 (36%), Gaps = 5/184 (2%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  + ++ ++  ++        P    +          +      T   +   + +S + 
Sbjct: 32  IGVLALMALLTDIVMDGLSRLQPELFNNFPSRRATQAGMKSAIVGTLYMLAIMLPLSFVL 91

Query: 83  TFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139
               A      AK  RL  ++   +  +  +P + +    +  F+ +    +  + L+  
Sbjct: 92  GVGAAIYLEEYAKKNRLTRIIQLNISTLAGVPSIVYGILGLTIFVRMM--HLDRSLLSGA 149

Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199
           F +    +  +  S  +++  +P+   + S +   + WQ      +P S+ G++  ++++
Sbjct: 150 FTMTLLVLPIIIVSAQEAIRAVPKSRRDASFALGATKWQTVARSVLPSSISGILTGVILA 209

Query: 200 MSGG 203
           MS  
Sbjct: 210 MSRA 213



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 18/219 (8%)

Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV----------- 376
             N  Q+   +R+ ++L I +        + +       +++  +               
Sbjct: 6   DANRKQIAKRRRIDWVLRILFLFATSIGVLALMALLTDIVMDGLSRLQPELFNNFPSRRA 65

Query: 377 --LYVIWLGCITMFRVVVLIIIASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPAN 431
               +      T++ + +++ ++ ++ +   I++     +  ++  IQ     LA  P+ 
Sbjct: 66  TQAGMKSAIVGTLYMLAIMLPLSFVLGVGAAIYLEEYAKKNRLTRIIQLNISTLAGVPSI 125

Query: 432 VFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
           V+  L ++            LS    M       I+ +      A P   ++ + +   T
Sbjct: 126 VYGILGLTIFVRMMHLDRSLLSGAFTMTLLVLPIIIVSAQEAIRAVPKSRRDASFALGAT 185

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
            W+     +LP      +TG I A   A   +    +  
Sbjct: 186 KWQTVARSVLPSSISGILTGVILAMSRAIGETAPLVMIG 224


>gi|300779693|ref|ZP_07089549.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium genitalium ATCC 33030]
 gi|300533803|gb|EFK54862.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium genitalium ATCC 33030]
          Length = 273

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 73/198 (36%), Gaps = 4/198 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNL 126
           + +  L+   +++          A+    G  +V  + +  S+ P +  +T     F ++
Sbjct: 69  SLIISLTTTALAVAVGVFTGYALARLNFPGKGIVTGIILAASMFPGIALVTPLFQLFSDI 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                IG   A I    +  +    +++      +P +LEE +R    +  Q F  + +P
Sbjct: 129 G---WIGTYRAMIIPNISFALPLTVYTLIAFFRQLPWELEEAARVDGATRAQAFRLVLLP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + PG+    +++    W   + S  +    T      I  +   +  E    +I+ A  
Sbjct: 186 LAAPGIFTTAIIAFIATWNEFMLSRQLSTEATEPVTVAIARFAGPSAFEYPYASIMAAGS 245

Query: 247 TMLGVIFLYDQLLFRPMI 264
            +   + +   +  R +I
Sbjct: 246 LVTVPLIIMVLIFQRRII 263



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 2/194 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++   +    +A  + +  G  +          +       + FP      PL       
Sbjct: 69  SLIISLTTTALAVAVGVFTGYALARLNFPGKGIVTGIILAASMFPGIALVTPLFQLFSDI 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     + +  I       ++ +IA     P + +E A     T  + +R ++LP   
Sbjct: 129 GWIGTYRAMIIPNISFALPLTVYTLIAFFRQLPWELEEAARVDGATRAQAFRLVLLPLAA 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI A    WN  ++S   S       T  +  +   S  +  +  ++    ++ 
Sbjct: 189 PGIFTTAIIAFIATWNEFMLSRQLSTEATEPVTVAIARFAGPSAFEYPYASIMAAGSLVT 248

Query: 564 CFVLALNRFLWHPL 577
             ++ +       +
Sbjct: 249 VPLIIMVLIFQRRI 262


>gi|27367903|ref|NP_763430.1| phosphate ABC transporter permease PstC [Vibrio vulnificus CMCP6]
 gi|320158173|ref|YP_004190551.1| phosphate transport system permease PstC [Vibrio vulnificus
           MO6-24/O]
 gi|27359476|gb|AAO08420.1| phosphate ABC transporter, permease protein PstC [Vibrio vulnificus
           CMCP6]
 gi|319933485|gb|ADV88348.1| phosphate transport system permease protein PstC [Vibrio vulnificus
           MO6-24/O]
          Length = 310

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 83/216 (38%), Gaps = 13/216 (6%)

Query: 14  RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QYAS 66
           RIF  +F   A + ++ +  I    I+E+        +  I L    LP           
Sbjct: 34  RIFHGLFLTSAVIGIVSLAVIAYFIIRESIPAFQEAGVSGIVLGQDWLPPALYGVATMIV 93

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGF----LTFTV 120
            + +    A+++ +    + A   A+   +R+  ++ P ++++  IP + +    L   V
Sbjct: 94  ASMVSTFGAVLVGVPVGVLTAVFIAEIAPKRVADIIRPAVELLAGIPSVVYGFFGLVIIV 153

Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180
               N++        LA I  +    +  +      S+  +PR  +E S +   S     
Sbjct: 154 PLIQNVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKEGSLALGASKIFTI 213

Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
           + L VP +  G++  +++ +       +A  M++  
Sbjct: 214 FKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 249



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+ +       N  L   +++       
Sbjct: 123 KRVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQNVFDVPAGNTILAGIIVLGVMILPT 182

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 183 VITVSETSIRAVPRAYKEGSLALGASKIFTIFKLLVPAARSGIMTGVILGIGRALGETMA 242

Query: 524 SEVASWGHIHLRTTGL 539
             +       +    L
Sbjct: 243 IIMVMGNAPAMPEGLL 258


>gi|67922906|ref|ZP_00516403.1| Binding-protein-dependent transport systems inner membrane
           component:ABC transporter [Crocosphaera watsonii WH
           8501]
 gi|67855256|gb|EAM50518.1| Binding-protein-dependent transport systems inner membrane
           component:ABC transporter [Crocosphaera watsonii WH
           8501]
          Length = 644

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 462 WYILFNVIAGA-SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520
           + +++    GA      +    A +   T W+ +R I+LP   P  ++G + A   A   
Sbjct: 100 FPLMYKTALGAFQQIDTNLLASARTLGATEWQVFRRILLPLARPGLISGVLLAFARALGE 159

Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569
              + + + G I  +T  +   I  + E G   E +L V +M    L++
Sbjct: 160 FGATLMLA-GSIPGKTQTVPIAIFFAAESGDMTEAMLWVSVMLVLSLSI 207



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 27/199 (13%)

Query: 73  LSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFT------------ 119
           L    ++    F    +AA++  +    +  ++D + + P++  L  T            
Sbjct: 12  LKTAALATTIAFFLGAIAARTMFKYRGKVKGLIDGILTAPLV--LPPTVVGFFLLLLLGK 69

Query: 120 ---VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              +  F+ L+   VI    AA+ A        M  +   +   I  +L   +R+   + 
Sbjct: 70  YGPIGKFLRLFDITVIFTWYAAVIAATVVAFPLMYKTALGAFQQIDTNLLASARTLGATE 129

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW----FFVVASEMIVVGDTVIPLPGIGSYIALA 232
           WQ F  + +P + PGL+  ++++ +         ++ +  I      +P+      I  A
Sbjct: 130 WQVFRRILLPLARPGLISGVLLAFARALGEFGATLMLAGSIPGKTQTVPIA-----IFFA 184

Query: 233 IKEQDLLAILYAMLTMLGV 251
            +  D+   +  +  ML +
Sbjct: 185 AESGDMTEAMLWVSVMLVL 203


>gi|307323378|ref|ZP_07602588.1| ABC transporter related protein [Streptomyces violaceusniger Tu
           4113]
 gi|306890867|gb|EFN21843.1| ABC transporter related protein [Streptomyces violaceusniger Tu
           4113]
          Length = 598

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 16/214 (7%)

Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLA 426
            +      +  +++ G +++    + +++A +I +P G+  G+    + + +   A L+ 
Sbjct: 81  ADSVGRDVLARLLYGGRVSLLGGFIAVVVALLIGVPAGLLAGYYRGRLDAVVSWVASLVM 140

Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND-FKEVASS 485
           A PA +   LV         N  + +  L++    + +   V A  ++   + + + A  
Sbjct: 141 AAPAIMVL-LVSIAAIGPDTNATMAVLGLILAPGVFRL---VRASVTSVREELYVDAARV 196

Query: 486 FHITGWRWWRYIILPGI-FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544
             +   R  R  ILP +  P  +    +A        I + +   G         GA + 
Sbjct: 197 SGLGDARIVRRHILPVVQAPTII---QSAQMFGVAVVIQAGIEFLGLGSAGQASWGAMLN 253

Query: 545 ESTEKGSF-PEVVLG-----VLIMCCFVLALNRF 572
           E+       P +++      V+ +    L  N  
Sbjct: 254 EAFANLYTKPTMLVAPGLAIVITVATLGLLANAL 287



 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 14/200 (7%)

Query: 58  VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFL 116
           +  L      + L    A+V++LL       LA   R RL  V+  +  ++ + P     
Sbjct: 89  LARLLYGGRVSLLGGFIAVVVALLIGVPAGLLAGYYRGRLDAVVSWVASLVMAAPA---- 144

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD-LEEVSRSFRLS 175
              V+       G    A +A +  I    V+ +   +  S+ ++  +   + +R   L 
Sbjct: 145 -IMVLLVSIAAIGPDTNATMAVLGLILAPGVFRL---VRASVTSVREELYVDAARVSGLG 200

Query: 176 GWQKFWYLGVPFS-MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
             +      +P    P ++ +  M    G   V+ + +  +G         G+ +  A  
Sbjct: 201 DARIVRRHILPVVQAPTIIQSAQM---FGVAVVIQAGIEFLGLGSAGQASWGAMLNEAFA 257

Query: 235 EQDLLAILYAMLTMLGVIFL 254
                  +     +  VI +
Sbjct: 258 NLYTKPTMLVAPGLAIVITV 277


>gi|240138311|ref|YP_002962783.1| ATP-binding protein of ABC family transporter [Methylobacterium
           extorquens AM1]
 gi|240008280|gb|ACS39506.1| ATP-binding protein of ABC family transporter [Methylobacterium
           extorquens AM1]
          Length = 321

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 9/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   II  +  + V I     P +   + P A + +A P     P++V    +   +   
Sbjct: 131 LPGYIIGCLSGLGVAILADRLPVLGRGLLPVANVASALPIVGIAPIMVMWFGFDWPSK-- 188

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             + ++   T + +L    AG +A  +  +++  ++     R    + LP   P+  T  
Sbjct: 189 --AAVVAVMTFFPMLVQAGAGLAATGSIERDLMRTYAAGYARTLLSLRLPMALPFLFTAL 246

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A   +IV+E      +     G+G  I+    + S   V   +++      A  
Sbjct: 247 KVNATLALIGAIVAEFFGTPIV-----GMGFRISIEAARLSLDMVWAEIVLAALAGSAFY 301

Query: 571 RFL 573
             +
Sbjct: 302 GLI 304



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 72/187 (38%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   +I  L     A LA +   LG  L+P+ ++  ++PI+G     V++F   +P K  
Sbjct: 131 LPGYIIGCLSGLGVAILADRLPVLGRGLLPVANVASALPIVGIAPIMVMWFGFDWPSKAA 190

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +   F +          +   +  +I RDL    R++     +    L +P ++P L
Sbjct: 191 VVAVMTFFPMLVQAG-----AGLAATGSIERDLM---RTYAAGYARTLLSLRLPMALPFL 242

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      + +E         P+ G+G  I++      L  +   ++      
Sbjct: 243 FTALKVNATLALIGAIVAEFFGT-----PIVGMGFRISIEAARLSLDMVWAEIVLAALAG 297

Query: 253 FLYDQLL 259
             +  L+
Sbjct: 298 SAFYGLI 304


>gi|188495690|ref|ZP_03002960.1| putrescine ABC transporter, permease protein PotH [Escherichia coli
           53638]
 gi|188490889|gb|EDU65992.1| putrescine ABC transporter, permease protein PotH [Escherichia coli
           53638]
 gi|309701134|emb|CBJ00432.1| putrescine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|323937963|gb|EGB34225.1| inner membrane transport system [Escherichia coli E1520]
 gi|332342244|gb|AEE55578.1| putrescine transport system permease protein PotH [Escherichia coli
           UMNK88]
          Length = 317

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 85/237 (35%), Gaps = 20/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     + ++  ++ + + +T D      Y  ++      +    LL  +  A   A S
Sbjct: 69  LMEWADGQLSITLNLGNFLQLTDDPLYFDAY-LQSLQVAAISTFCCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++      P  ++   LA 
Sbjct: 128 KPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  + V  M   +Y +L  I   L E +        + F+ + VP +  G++   M+
Sbjct: 188 YIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFNVIVPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V  E++   D+++    IG  +           +  A+  ++ ++ + 
Sbjct: 248 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300



 Score = 37.2 bits (85), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 5/139 (3%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
           N    L V       L+ NL + + +++    +++  +            E A       
Sbjct: 166 NFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARP 225

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES-TEK 549
            + +  +I+P      + G++     A    ++ E+       +    +G  + +     
Sbjct: 226 LKTFFNVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNN 281

Query: 550 GSFPEVVLGVLIMCCFVLA 568
             +P      +IM   ++ 
Sbjct: 282 RDWPVASAVAIIMLLLLIV 300


>gi|292558424|gb|ADE31425.1| Binding-protein-dependent transport systems related protein
           [Streptococcus suis GZ1]
          Length = 295

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +       A+  +   L   +   ++I+ S+P +    F  + F+
Sbjct: 65  SFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  +   + L+   A+    +  MT ++  SL ++     E   +  LS W+   ++ 
Sbjct: 125 VQF--EYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETVLHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++PG+V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 IPEALPGIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 62/196 (31%), Gaps = 15/196 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      V+  +   +    +   + H ++                 I ++    
Sbjct: 8   KLATGILYSIAGVIVVILTSLILYILLRGLPHVSWDFLTSKSSSYKAGGGIGIQLYNSFF 67

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-FPANVFFP-LVVSCVSYYHLNPNL 450
           L+++  +I +P+    G      +K  P    +          P +VV    Y       
Sbjct: 68  LLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLFGYLIFVVQF 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIF 503
                ++ G     +FN+        +  +       E   +  ++ W    ++++P   
Sbjct: 128 EYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETVLHVVIPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  VTG + A G  + 
Sbjct: 188 PGIVTGIVLASGRIFG 203


>gi|257882731|ref|ZP_05662384.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|293568698|ref|ZP_06680013.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1071]
 gi|294617607|ref|ZP_06697237.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1679]
 gi|294622347|ref|ZP_06701380.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium U0317]
 gi|257818389|gb|EEV45717.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus faecium 1,231,502]
 gi|291588658|gb|EFF20491.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1071]
 gi|291596213|gb|EFF27476.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium E1679]
 gi|291598174|gb|EFF29273.1| phosphate ABC transporter, permease protein PstA [Enterococcus
           faecium U0317]
          Length = 294

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 4/154 (2%)

Query: 69  TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128
            + M+ +  ISL      +  A K+  L  V+   ++I+ S+P +    F  + F+  + 
Sbjct: 70  LITMIISFPISLGAGIYLSEYAGKN-WLTDVIRTSIEILSSLPSVVVGLFGFLVFVIQFQ 128

Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188
                   A    +F   +  +T ++ +SL  +     E   +  LS W+    + VP +
Sbjct: 129 YGFSIISGALALTVFNLPL--LTRTVEESLQAVHYTQREAGLALGLSRWETVMKVVVPEA 186

Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
            PG++  +++S SG  F   A+ +   G +   L
Sbjct: 187 TPGILTGVILS-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP---HISSKIQPFAQLLAAFP 429
           YQ+   +      +++ +++ +II+  I +  GI++        ++  I+   ++L++ P
Sbjct: 52  YQEGGGIGIQLFNSIYLLLITMIISFPISLGAGIYLSEYAGKNWLTDVIRTSIEILSSLP 111

Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEV 482
           +     +VV    +            +I G     +FN+                  +E 
Sbjct: 112 S-----VVVGLFGFLVFVIQFQYGFSIISGALALTVFNLPLLTRTVEESLQAVHYTQREA 166

Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
             +  ++ W     +++P   P  +TG I + G  + 
Sbjct: 167 GLALGLSRWETVMKVVVPEATPGILTGVILSSGRIFG 203


>gi|221633120|ref|YP_002522345.1| inner membrane ABC transporter permease YcjP [Thermomicrobium
           roseum DSM 5159]
 gi|221155701|gb|ACM04828.1| inner membrane ABC transporter permease protein ycjP
           [Thermomicrobium roseum DSM 5159]
          Length = 281

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 7/207 (3%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--PIL 113
           L     P++A  T +    +  +SL  + +      + R  G  L      +  +  P L
Sbjct: 65  LTNTDFPRWAWNTAVVTFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLIPPTL 124

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173
            F+  + V              L     +     W +          IPR+LEE +    
Sbjct: 125 LFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWLLM----GYFRTIPRELEECAMIDG 180

Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALA 232
            S +Q  W + +P ++PG++   + S +  W   + + + +    +  +P G  S +  A
Sbjct: 181 ASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA 240

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259
              Q    +  AML  + V   Y   +
Sbjct: 241 DVFQWGPLMAAAMLGSVPVAIAYMFFV 267



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 5/165 (3%)

Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416
           + +   ++ +     T  D     W   +  F    L + +SI+   +G  +G       
Sbjct: 51  LFLTQATLDHYRYLLTNTDFPRWAWNTAVVTFGSTFLSLTSSIL---MGYALGRFRFRGG 107

Query: 417 KIQPFAQLLAA-FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA-SA 474
            +   A  LA   P  + F  +   V+ + L    W  +L            ++ G    
Sbjct: 108 NLAGTAIFLAYLIPPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWLLMGYFRT 167

Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
            P + +E A     + ++    IILP   P  ++  I +   +WN
Sbjct: 168 IPRELEECAMIDGASRFQAMWRIILPLALPGVLSAGIFSFTLSWN 212


>gi|317402375|gb|EFV82947.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 217

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 61  LPQYASRTTLRMLSAMVISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPI 112
           L      T L +  A  I++L       +          +++ +   L  +++  +S+P 
Sbjct: 9   LITSLLDTLLMVGVASAIAVLVGIPLGVILTVTARGNMLENQAVNHALGAVINATRSVP- 67

Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172
              L   ++ F  L     IG   AAI  +  + +  M      ++  +   L   +R+ 
Sbjct: 68  FVILMVAIIPFTRLVAQTSIGTT-AAIVPLSVAAIPFMARIAENAMREVDPGLITAARAM 126

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
             S  Q    + +P ++PGL+   ++++
Sbjct: 127 GASPMQIIMKVLLPEALPGLIAATIVTV 154



 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 12/155 (7%)

Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFA 422
            + Q +  +I     T+  V V   IA ++ IP+G+ +             ++  +    
Sbjct: 1   MSPQLIDLLITSLLDTLLMVGVASAIAVLVGIPLGVILTVTARGNMLENQAVNHALGAVI 60

Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG---ASAFPNDF 479
               + P  +   + +   +      ++  +  ++  +   I F                
Sbjct: 61  NATRSVPFVILM-VAIIPFTRLVAQTSIGTTAAIVPLSVAAIPFMARIAENAMREVDPGL 119

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514
              A +   +  +    ++LP   P  +   I   
Sbjct: 120 ITAARAMGASPMQIIMKVLLPEALPGLIAATIVTV 154


>gi|309800708|ref|ZP_07694846.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           infantis SK1302]
 gi|308115661|gb|EFO53199.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           infantis SK1302]
          Length = 294

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 67/158 (42%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAA---KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  + IS+  +       A   K  R+   +   ++I+ S+P +    F  + F+
Sbjct: 65  SFFLLVITLFISVPLSMGAGIYLAEYAKKGRVTNFVRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +         A    +F   +  MT ++  SL ++     E   +  LS W+   ++ 
Sbjct: 125 VQFEYGFSIISGALALTVFN--LPQMTRNVEDSLKHVHHTQREAGLALGLSRWETVLHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++PG+V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 IPEALPGIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 16/191 (8%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398
              ++ I    ++  +  G+   S  ++     +YQ    +      + F +V+ + I+ 
Sbjct: 18  AGIIVTILASLILYILVRGLPHVSWSFLTGKSSSYQAGGGIGIQLYNSFFLLVITLFISV 77

Query: 399 IIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455
            + +  GI++                 ++L++ P+     +VV    Y            
Sbjct: 78  PLSMGAGIYLAEYAKKGRVTNFVRTCIEILSSLPS-----VVVGLFGYLIFVVQFEYGFS 132

Query: 456 MIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYIILPGIFPYYVT 508
           +I G     +FN+        +         +E   +  ++ W    ++++P   P  VT
Sbjct: 133 IISGALALTVFNLPQMTRNVEDSLKHVHHTQREAGLALGLSRWETVLHVVIPEALPGIVT 192

Query: 509 GAITACGGAWN 519
           G + A G  + 
Sbjct: 193 GIVLASGRIFG 203


>gi|297158610|gb|ADI08322.1| hypothetical protein SBI_05202 [Streptomyces bingchenggensis BCW-1]
          Length = 318

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 39  IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98
           ++  T P   +      L   +  +   RT +    A +I+L+  + YA L   S     
Sbjct: 68  VRSVTQPEPGLQNFSWLLHDATALEVLGRTLVVAAVATLITLVLGYPYAYLMTVSGPALR 127

Query: 99  VLVPILDIMQ-----SIPILGFLTF--------TVVYFMNLYPGKVIGAELAAIFAIFTS 145
            L+ +  +M       + +  ++          TV+  + L   +++G     +  +   
Sbjct: 128 GLLMLAVLMPFWTSLMVRVFAWVIILQDHGVLNTVLDALGLGRTQLLGTTTGVLIGMCQI 187

Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
            +  M   ++ ++ +I R L +         W+ FW + VP S+PG+    +M
Sbjct: 188 LMPFMVLPLFNAMRSIDRRLVQAGMICGAPPWKAFWRVFVPLSLPGVFAGSLM 240


>gi|311743299|ref|ZP_07717106.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Aeromicrobium marinum DSM
           15272]
 gi|311313367|gb|EFQ83277.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, permease protein [Aeromicrobium marinum DSM
           15272]
          Length = 235

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 14/173 (8%)

Query: 87  ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146
                 + RL  + V     ++++P LG     + +      G  +   + A+ A+    
Sbjct: 60  GLWVGHTGRLRGLAVVSSGTLRALPTLG----VLTWAALQSGGNRL---VPAVLALTVLA 112

Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206
           +  +    Y  L ++ R   + +R+  ++ WQ    + +P +   +V  +          
Sbjct: 113 IPPLLAGAYAGLESVDRATIDAARAIGMTEWQILVKVEIPLAADLIVGGLR----SATLQ 168

Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
           VVA+  I      I L G+G YI       D   +L A + ++ +    D L 
Sbjct: 169 VVATATIAA---YIGLGGLGRYIIDGQAVSDYARMLGASVLVVALALALDGLF 218



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464
           G+W+G    +       +  L A P      ++         N  +   L +       +
Sbjct: 60  GLWVGHTGRLRGLAVVSSGTLRALPTLG---VLTWAALQSGGNRLVPAVLALTVLAIPPL 116

Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524
           L    AG  +      + A +  +T W+    + +P      V G  +A       + ++
Sbjct: 117 LAGAYAGLESVDRATIDAARAIGMTEWQILVKVEIPLAADLIVGGLRSATLQVVATATIA 176

Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558
                G       GLG YI +      +  ++  
Sbjct: 177 AYIGLG-------GLGRYIIDGQAVSDYARMLGA 203


>gi|329768914|ref|ZP_08260341.1| hypothetical protein HMPREF0433_00105 [Gemella sanguinis M325]
 gi|328836631|gb|EGF86289.1| hypothetical protein HMPREF0433_00105 [Gemella sanguinis M325]
          Length = 220

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 76/203 (37%), Gaps = 17/203 (8%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKS--------RRLGMVLVPILDIMQSIPILGFL 116
              T +    ++   ++       L   S        R    V+  I++I ++IP    L
Sbjct: 16  TIETLVMTFESLAAVVIIGICLGLLLYLSSNSNGAFGRIFYAVVSAIVNIFRAIP-FIIL 74

Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176
              ++ F     G + G + AA+ A+  S        +   L  + + + E +R+     
Sbjct: 75  IVLLLPFTKTLVGSISGPQ-AAMPALILSAAPFYARLVEIGLREVDKGVIEAARAMGAKK 133

Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236
                 + +P S+P +V  + ++       +V S  +     VI   G+G+   L   ++
Sbjct: 134 ITIVTKVLIPESLPAIVSGLTVTA----IALVGSTAMAG---VIGAGGLGNLAYLDGFQR 186

Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259
           +   + +    ++ VI    Q+L
Sbjct: 187 NNNTLTFVATVLILVIVFAIQIL 209



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 60/199 (30%), Gaps = 20/199 (10%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFR--------PHISSKIQPFAQLLAAFPANVFFPLV 437
           T+      +    II I +G+ +               + +     +  A P  +   L+
Sbjct: 19  TLVMTFESLAAVVIIGICLGLLLYLSSNSNGAFGRIFYAVVSAIVNIFRAIPFIILIVLL 78

Query: 438 VSC---VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
           +     +      P   +  L++    +Y    V  G         E A +         
Sbjct: 79  LPFTKTLVGSISGPQAAMPALILSAAPFYARL-VEIGLREVDKGVIEAARAMGAKKITIV 137

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI-AESTEKGSFP 553
             +++P   P  V+G          ++ ++ V   G       GLG     +  ++ +  
Sbjct: 138 TKVLIPESLPAIVSGLTVTAIALVGSTAMAGVIGAG-------GLGNLAYLDGFQRNNNT 190

Query: 554 EVVLGVLIMCCFVLALNRF 572
              +  +++   V A+   
Sbjct: 191 LTFVATVLILVIVFAIQIL 209


>gi|327439062|dbj|BAK15427.1| ABC-type Fe3+ transport system, permease component [Solibacillus
           silvestris StLB046]
          Length = 573

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 65/477 (13%), Positives = 157/477 (32%), Gaps = 52/477 (10%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI--- 110
            +L+  +  +    +    + +++   +   + A L  +    G  L+ IL ++  +   
Sbjct: 64  FSLESTANLEALWNSFYISIISVICCAVVGVMMAFLLERYDFPGRRLLSIL-VLVPMALP 122

Query: 111 PILGFLTFTVVY---------FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY----QS 157
           P++G L+FT +Y         F  ++  + +   L  I+ +     + M    Y     +
Sbjct: 123 PLVGVLSFTFLYGESGIFPRLFQQMFQLEDVPFALKGIWGVIVVHTFTMYTYFYLTASAA 182

Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217
           +  +   LEE + S   S  + +  + +P   P L+ + ++          A  M  V  
Sbjct: 183 IKGLDPSLEEAATSLGASRIRVWRKIILPMLTPSLIASSLLVFMVSMASYTAPLMFGVER 242

Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277
           T+        Y++      D+ A    +L+ + + FL     ++    + N  +      
Sbjct: 243 TMTMQI----YLSRTNGNLDMAATQSTILSFVSITFLLIMRWYQNRRNYQNLSKGISVHR 298

Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337
              +   + YL    +F+  +          L +  K    T+ ++   +  +  +    
Sbjct: 299 SEVSSKPLKYLAVTLSFIGTLILILPILVLILISFSKDGAWTIQILPTEYTLDHYKALFT 358

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
              ++     W  +  G    +     G    +   +  L       + +   +   +  
Sbjct: 359 DERTWRP--IWNSLQMGFIATVGNIIFGVAAAYAMVR--LSFKGKTALDILITIPWALPG 414

Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457
           +++ +                     L+AAF     F      +       + W+  L  
Sbjct: 415 TVVAV--------------------NLIAAFSTESAFTFNQVLIG------SFWILPLAY 448

Query: 458 FGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513
           F     ++F +  A         +E + S   + W  +R I++P      + G + A
Sbjct: 449 FIRHLPLVFRSTSASLMQLDQSVEEASRSLGASWWYTFRRIVIPLTLSGVLAGTLLA 505



 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 5/151 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN- 125
           +      A V +++F    A    + S +    L  ++ I  ++P        +  F   
Sbjct: 369 SLQMGFIATVGNIIFGVAAAYAMVRLSFKGKTALDILITIPWALPGTVVAVNLIAAFSTE 428

Query: 126 ---LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
               +   +IG+      A F   +  +  S   SL  + + +EE SRS   S W  F  
Sbjct: 429 SAFTFNQVLIGSFWILPLAYFIRHLPLVFRSTSASLMQLDQSVEEASRSLGASWWYTFRR 488

Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213
           + +P ++ G++   +++        VAS +I
Sbjct: 489 IVIPLTLSGVLAGTLLAFVQSIGEFVASILI 519


>gi|317049539|ref|YP_004117187.1| binding-protein-dependent transporter inner membrane component
           [Pantoea sp. At-9b]
 gi|316951156|gb|ADU70631.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 580

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 67/464 (14%), Positives = 136/464 (29%), Gaps = 62/464 (13%)

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
           PG+     +  I  +       + F ++   L  +P DL E ++    S W+  + + +P
Sbjct: 153 PGEQPLYSMTGIVLLLGMHNAPLVFLTVRAGLRRLPADLVEAAQVSGASRWRVLFTIILP 212

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P +        S    FV A+                               + AML
Sbjct: 213 LARPAIFA------SAALTFVAAAGNFG---------------------------IQAML 239

Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306
            +   +     L+++         +L         ++ V  L      L  +G S+W   
Sbjct: 240 GIPARVPTLITLVYQ---------QLNGIGPGALPNTAVYALLIALITLAGMGLSAWLGG 290

Query: 307 S---PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363
                +S   +   + LG  R+              +  +  +    +  G    + WQ+
Sbjct: 291 RHDVRVSGAPRLWRQPLGRSRYVVEACVWLWMVLTLLLPVSALLITALTHGYGQALTWQT 350

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
           +              V      ++    +  II +++ + +  ++ +R     +    A 
Sbjct: 351 LTLENFRAALWGYPAVRQAFLTSLGLTSLAAIILTVMALFLAYFLSWRRTRLVRGLWLAS 410

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN------------VIAG 471
            L          +V    +       L L  + ++GT W IL               +AG
Sbjct: 411 ELTY----ALPGIVTGVAALLFFLRPLPLIEVSLYGTVWIILAAYLANFLALVLRPTLAG 466

Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531
            +       E A        R  R I+LP   P  + G +     A N   VS +     
Sbjct: 467 FAQLEPALDEAARLCGAGFLRRMRDILLPLAAPSTLAGTVLVFLTALNEIQVSVLLVTSQ 526

Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575
                  +       +   +     L ++++C  +    R    
Sbjct: 527 TQTIGPTIVFLDEGGSASLAAAVGCLMIVVVCLLMALATRLTRR 570


>gi|311743234|ref|ZP_07717041.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
 gi|311313302|gb|EFQ83212.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
          Length = 301

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 12/152 (7%)

Query: 62  PQYASRTTLRMLSAMVIS--LLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIP 111
           P+ A      + SA VIS   L        A           +     +   +  + ++P
Sbjct: 74  PETAGARAAILGSAWVISTTALLAIPLGIAAGVYLEEFADNRKWWNKFIETNISNLAAVP 133

Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
            + +   T  +   L  G      LA   A+    +  +  S  ++L  +P+++ + S +
Sbjct: 134 AIVYGMLTAGF--ALAIGMERRIVLAGGIALALLILPVIIISTREALRAVPQEIRQGSIA 191

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  Q  W   +P ++PG+    ++++S  
Sbjct: 192 LGATPLQTVWRQTLPSAVPGIATGSILALSRA 223



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 18/138 (13%)

Query: 394 IIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVF------FPLVVS 439
           I   +++ IP+GI  G         R   +  I+     LAA PA V+      F L + 
Sbjct: 90  ISTTALLAIPLGIAAGVYLEEFADNRKWWNKFIETNISNLAAVPAIVYGMLTAGFALAIG 149

Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499
                 L   + L+LL++      I+ +      A P + ++ + +   T  +      L
Sbjct: 150 MERRIVLAGGIALALLILPV----IIISTREALRAVPQEIRQGSIALGATPLQTVWRQTL 205

Query: 500 PGIFPYYVTGAITACGGA 517
           P   P   TG+I A   A
Sbjct: 206 PSAVPGIATGSILALSRA 223


>gi|254510243|ref|ZP_05122310.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium KLH11]
 gi|221533954|gb|EEE36942.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacteraceae bacterium KLH11]
          Length = 414

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 8/130 (6%)

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +I  ++  I A+    +  M   MY  +  IP      ++S   + W  FW +  P S+P
Sbjct: 277 IINNQIGTIIAMTHILLPFMILPMYSVMQTIPVSYTRAAKSMGATNWTTFWRIYFPQSIP 336

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
           G+    ++       + +  E++            G +I+  I      ++ + +   LG
Sbjct: 337 GIGAGSILVFILAIGYYITPEIVGGTK--------GVFISNRIAYHISSSLNWGLAAALG 388

Query: 251 VIFLYDQLLF 260
            I L   LL 
Sbjct: 389 TILLGVVLLL 398



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 2/138 (1%)

Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490
            V+  LV        +N  +   + M      +++  + +     P  +   A S   T 
Sbjct: 263 LVWLGLVADDARLVIINNQIGTIIAMTHILLPFMILPMYSVMQTIPVSYTRAAKSMGATN 322

Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550
           W  +  I  P   P    G+I     A    I  E+         +  +  +I+ S   G
Sbjct: 323 WTTFWRIYFPQSIPGIGAGSILVFILAIGYYITPEIVGGTKGVFISNRIAYHISSSLNWG 382

Query: 551 SFPEVVLGVLIMCCFVLA 568
                 LG +++   +L 
Sbjct: 383 L--AAALGTILLGVVLLL 398


>gi|119384229|ref|YP_915285.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119373996|gb|ABL69589.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
          Length = 243

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 16/222 (7%)

Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408
              +    + +A      +     + D L        ++ R    +  A  +  P+G+  
Sbjct: 25  LPAILPGPLAVAAALWTLLTEPSFWTDTL------LPSLGRAAAGLASAFALGAPLGLAG 78

Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468
              P IS+   P   +L   PA +   L +       L   L +++L++   Q      V
Sbjct: 79  WRWPVISALAAPLRLILMGMPAPILAILFILWFDGGPLTVILTVAVLLLPVFQ----IAV 134

Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528
             G     +   E+A  F +   R    I LP ++         A   A   ++++E+ S
Sbjct: 135 AEGTGNIDSHLAEMARVFRVPLMRQLHRIALPAVWTALGPALRIAVANALRVTLLTELLS 194

Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                    GLGA +  +        +   V+++   +   +
Sbjct: 195 G------AEGLGAAVQRAQSWLQTDRLFALVILILALIGLAD 230



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------QYASRTTLRMLSA 75
           +AF+  +  + ++       ++P  +   + +   + +L             +  R  + 
Sbjct: 4   IAFLTGLASLGLIWSLAARNSLPAILPGPLAVAAALWTLLTEPSFWTDTLLPSLGRAAAG 63

Query: 76  MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           +  +            +   +  +  P+  I+  +P        +++F         G  
Sbjct: 64  LASAFALGAPLGLAGWRWPVISALAAPLRLILMGMPAPILAILFILWF--------DGGP 115

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L  I  +    +     ++ +   NI   L E++R FR+   ++   + +P     L   
Sbjct: 116 LTVILTVAVLLLPVFQIAVAEGTGNIDSHLAEMARVFRVPLMRQLHRIALPAVWTALGPA 175

Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
           + ++++      + +E++   +      G+G+ +  A        +   ++ +L +I L 
Sbjct: 176 LRIAVANALRVTLLTELLSGAE------GLGAAVQRAQSWLQTDRLFALVILILALIGLA 229

Query: 256 DQLL 259
           D  L
Sbjct: 230 DTGL 233


>gi|323339316|ref|ZP_08079605.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323093269|gb|EFZ35852.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 297

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 75/183 (40%), Gaps = 6/183 (3%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78
           I  ++  +L   I  IL+ G+   +    +            +      +   ++  ++I
Sbjct: 17  IAGIVVVILAFLIGRILIQGLPHISWKF-LTTSSKAFTSGGGIGIQLFNSFYLLILTLII 75

Query: 79  SLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135
           S   +       A+      L  V+   ++I+ S+P +    F  + F+  +  K+  + 
Sbjct: 76  SFPISLGAGIFLAEYAPKNALTNVIRMAIEILSSLPSVVVGLFGFLLFVVQF--KLGFSI 133

Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195
           L+   A+    +  +T ++  SL ++P+   E   +  LS W     + +P ++PG+V  
Sbjct: 134 LSGAIALTFFNLPLLTRNIEDSLNSVPKLQREAGLALGLSKWHTVIKVILPEAIPGIVTG 193

Query: 196 MMM 198
           +++
Sbjct: 194 IVL 196



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 67/166 (40%), Gaps = 7/166 (4%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418
           I+W+ +      FT    + +      + + +++ +II+  I +  GI++      ++  
Sbjct: 40  ISWKFLTTSSKAFTSGGGIGI--QLFNSFYLLILTLIISFPISLGAGIFLAEYAPKNALT 97

Query: 419 QPF---AQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473
                  ++L++ P+ V   F  ++  V +      L  ++ + F     +  N+    +
Sbjct: 98  NVIRMAIEILSSLPSVVVGLFGFLLFVVQFKLGFSILSGAIALTFFNLPLLTRNIEDSLN 157

Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
           + P   +E   +  ++ W     +ILP   P  VTG +   G  + 
Sbjct: 158 SVPKLQREAGLALGLSKWHTVIKVILPEAIPGIVTGIVLCAGRIFG 203


>gi|209694463|ref|YP_002262391.1| D-methionine transport system permease protein MetI [Aliivibrio
           salmonicida LFI1238]
 gi|208008414|emb|CAQ78572.1| D-methionine transport system permease protein MetI [Aliivibrio
           salmonicida LFI1238]
          Length = 225

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 60/155 (38%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILD 105
           + L+   L      T   +  A ++          +          ++     +L  +++
Sbjct: 10  LDLNSKLLLNATGETLYMVSVAGIVGFAIGIPLGVILHITKKGGLMENPAFNSILGAVVN 69

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +S+P L  +   ++       G  IG   AAI  +    +  +   +  +L  +P  L
Sbjct: 70  MGRSVPFLVLM-VAIIPVTKFIVGSFIGTT-AAIVPLTIGAIPFVARLVEGALIEVPSGL 127

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E ++S   +  Q    + +P ++P +V ++ +++
Sbjct: 128 VEAAQSMGATPLQIITKVLLPEALPMIVNSVTITL 162



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWI------GF--RPHISSKIQPFAQLLAAFPANVFFPLV 437
           T++ V V  I+   I IP+G+ +      G    P  +S +     +  + P  V    +
Sbjct: 24  TLYMVSVAGIVGFAIGIPLGVILHITKKGGLMENPAFNSILGAVVNMGRSVPFLVLMVAI 83

Query: 438 VSC--VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495
           +                 + +  G   ++   V       P+   E A S   T  +   
Sbjct: 84  IPVTKFIVGSFIGTTAAIVPLTIGAIPFVARLVEGALIEVPSGLVEAAQSMGATPLQIIT 143

Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555
            ++LP   P  V           + S ++     G +       G +         +   
Sbjct: 144 KVLLPEALPMIVNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH--------RYDLT 195

Query: 556 VLGVLIMCCFVLA 568
           ++ V ++   VL 
Sbjct: 196 IMAVTVVMLIVLV 208


>gi|225550597|ref|ZP_03771546.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           2 str. ATCC 27814]
 gi|225379751|gb|EEH02113.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           2 str. ATCC 27814]
          Length = 731

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            F+ LAF++    +  +   I    +   ++     +    ++  Q    T + ++ A++
Sbjct: 382 FFESLAFMVAFAFLAWISLDILVNGIKAINLPTSTVVAYTKNTTGQATINTLIIIIVAIL 441

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP----GK 130
           I L F+   A      AK++    VL+  +D   S P + F  F +V F+ ++     G 
Sbjct: 442 IGLPFSLFVAIYINEYAKNKWPKKVLLFFIDSFGSTPSIIFGMFGLVIFIEIFGFTSMGN 501

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  + LA    I    +   T S+ QSL  +P  + E +     S W+    L +P +  
Sbjct: 502 IGKSLLAGALTITLVVLPTFTRSIQQSLKAVPMSIRENAYGLGCSKWETIVKLVLPQAKK 561

Query: 191 GLVWNMMMSMS 201
           G++  +++++ 
Sbjct: 562 GIISAIVLTIG 572


>gi|317054165|ref|YP_004118190.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316952160|gb|ADU71634.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 216

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 10/155 (6%)

Query: 54  ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD-------- 105
           ++L    L      T L +  + + +L      A +   + R  +   P+L+        
Sbjct: 1   MSLGFDRLWTGLLDTLLMVGVSSLFALALGLPMAVILVVTGRGDLFPNPLLNRLLGWVVN 60

Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165
           + +SIP L  +   ++ F     G   G   A +     +  +    +   SL  + + L
Sbjct: 61  LFRSIPFLILM-VALIPFTRWVVGTTYGVWAATVPLTLAATPFFARIAE-VSLREVDKGL 118

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            E +++     W   W++ +P + PG+V    +++
Sbjct: 119 TEAAQAMGFHRWHIVWHVLLPEARPGIVSGFTITL 153



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 15/148 (10%)

Query: 380 IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPA 430
           +W G + T+  V V  + A  + +P+ + +           P ++  +     L  + P 
Sbjct: 8   LWTGLLDTLLMVGVSSLFALALGLPMAVILVVTGRGDLFPNPLLNRLLGWVVNLFRSIPF 67

Query: 431 N----VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486
                   P     V   +      + L +     +  +               E A + 
Sbjct: 68  LILMVALIPFTRWVVGTTYGVWAATVPLTLAATPFFARI--AEVSLREVDKGLTEAAQAM 125

Query: 487 HITGWRWWRYIILPGIFPYYVTGAITAC 514
               W    +++LP   P  V+G     
Sbjct: 126 GFHRWHIVWHVLLPEARPGIVSGFTITL 153


>gi|222445876|ref|ZP_03608391.1| hypothetical protein METSMIALI_01522 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435441|gb|EEE42606.1| hypothetical protein METSMIALI_01522 [Methanobrevibacter smithii
           DSM 2375]
          Length = 282

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 8/206 (3%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY---VIWLGCITMFRVVVLIII 396
           +S ++ +     + G  +      I +     +  D      +  +   +++ V +  II
Sbjct: 20  LSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPMIISSIYVVFIAAII 79

Query: 397 ASIIWIPVGIWI---GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWL 452
           A+ + +   I++        +   I+  ++ LA+ P+ VF    ++    +  L   +  
Sbjct: 80  ATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILS 139

Query: 453 SLLMIFGTQWYILFNVI-AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511
             L++       +F V     S+ PN +KE       T W+    +ILP   P  +TG I
Sbjct: 140 GGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVI 199

Query: 512 TACGGAWNASIVSEVASWGHIHLRTT 537
            A   A + +     A    + +  +
Sbjct: 200 LAMTRAISEAAAVMYAVGSAMTVPVS 225



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 9/218 (4%)

Query: 8   PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQY 64
            P  S++I   +F L   + ++ ++ IL + + +     +   +    +D      +   
Sbjct: 6   SPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPM 65

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
              +   +  A +I+       A      A ++++   +    + + SIP + F  F + 
Sbjct: 66  IISSIYVVFIAAIIATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLA 125

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
           +F+     K+    L+    +    +  +      +L +IP   +E       + WQ  +
Sbjct: 126 FFVVFL--KLGWCILSGGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQVIY 183

Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219
            + +P ++PG++  ++++M+       A+ M  VG  +
Sbjct: 184 SVILPAALPGIITGVILAMTRA-ISEAAAVMYAVGSAM 220


>gi|312867728|ref|ZP_07727934.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           parasanguinis F0405]
 gi|311096791|gb|EFQ55029.1| phosphate ABC transporter, permease protein PstA [Streptococcus
           parasanguinis F0405]
          Length = 294

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 70/158 (44%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  +VIS   +          AK  RL  ++   ++I+ S+P +    F  + F+
Sbjct: 65  SFFLLVITLVISFPLSLGAGIYLSEYAKKGRLTNLVRTCIEILSSLPSVVVGLFGYLVFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  K   + ++   A+    +  MT ++  SL ++     E   +  LS W+   ++ 
Sbjct: 125 VQF--KYGFSIISGALALTVFNLPQMTRNIEDSLQHVHHTQREAGLALGLSRWETVIHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           VP ++P ++  ++++ SG  F   A+ +   G +   L
Sbjct: 183 VPEALPSIITGVVLA-SGRIFGEAAALIYTAGQSAPTL 219



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 71/196 (36%), Gaps = 21/196 (10%)

Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF------TYQDVLYVIWLGCITMFRVVVL 393
           V Y +      ++  + + I  + + ++  HF      +YQ    +      + F +V+ 
Sbjct: 13  VLYAISGIIVAILASLILYILVRGLPHVSWHFLTGKSSSYQAGGGIGIQLYNSFFLLVIT 72

Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPF---AQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           ++I+  + +  GI++                 ++L++ P+     +VV    Y       
Sbjct: 73  LVISFPLSLGAGIYLSEYAKKGRLTNLVRTCIEILSSLPS-----VVVGLFGYLVFVVQF 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDF-------KEVASSFHITGWRWWRYIILPGIF 503
                +I G     +FN+        +         +E   +  ++ W    ++++P   
Sbjct: 128 KYGFSIISGALALTVFNLPQMTRNIEDSLQHVHHTQREAGLALGLSRWETVIHVVVPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  +TG + A G  + 
Sbjct: 188 PSIITGVVLASGRIFG 203


>gi|306834325|ref|ZP_07467442.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423498|gb|EFM26647.1| phosphate ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 292

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 66/180 (36%), Gaps = 3/180 (1%)

Query: 22  LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81
            +     +G I +        ++     +   ++L    L      T L +  A+ I + 
Sbjct: 37  FVGIAFTVGYILVKGLPNLNMSLFAWTYNSENVSLLPA-LINTIFMTILALSVAVPIGIG 95

Query: 82  FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141
            +      A +      V+    + +  IP + +  F  ++F+      +     A   +
Sbjct: 96  ASIYLVEYARRDNPFVSVIRIATETLSGIPSIIYGLFGALFFVKFAHMGLSLLSGAVTLS 155

Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
           I    +  +  +  ++L ++P    E + +      +  + + +P +MPG+   +++++ 
Sbjct: 156 IMILPL--IMRTTEEALLSVPDSYREGAFALGAGKLRTIFKIVLPSAMPGIFSGIILAIG 213



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382
           I     +   Q      VS ML +  +       +GIA+     +V      ++    W 
Sbjct: 4   INHRSFKQDWQSRRRDLVSLMLYLLVYGAALITFVGIAFTVGYILVKGLPNLNMSLFAWT 63

Query: 383 -------GCITMFRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLA-------A 427
                      +   + + I+A  + +P+GI         + +  PF  ++         
Sbjct: 64  YNSENVSLLPALINTIFMTILALSVAVPIGIGASIYLVEYARRDNPFVSVIRIATETLSG 123

Query: 428 FPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASS 485
            P+ ++     +  V + H+  +L    + +      ++         + P+ ++E A +
Sbjct: 124 IPSIIYGLFGALFFVKFAHMGLSLLSGAVTLSIMILPLIMRTTEEALLSVPDSYREGAFA 183

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACG 515
                 R    I+LP   P   +G I A G
Sbjct: 184 LGAGKLRTIFKIVLPSAMPGIFSGIILAIG 213


>gi|300856953|ref|YP_003781937.1| putative molybdate ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300437068|gb|ADK16835.1| predicted molybdate ABC transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 269

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 9/145 (6%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF--- 123
           T      + +I L+F    A   A+    G  ++  ++ I  SIP +      ++ F   
Sbjct: 57  TLYTSTISTIICLIFAVPIAYGLARYDFFGKMIINSVIQISNSIPPIAAGIALLMLFSTK 116

Query: 124 -----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178
                +N      + +    I A F      M   +  +  ++   LE V R+   S W 
Sbjct: 117 QVEDIINRLGLDPVFSVKGIILANFFINAPYMIRILKGTFEDVNPKLEFVGRTLGCSVWG 176

Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGG 203
            F+ + +P +  GL+  ++++    
Sbjct: 177 SFFKITIPLAKNGLISAIIITWINA 201



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 17/148 (11%)

Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSY 443
           +T++   +  II  I  +P+   +         I     Q+  + P       ++   S 
Sbjct: 56  LTLYTSTISTIICLIFAVPIAYGLARYDFFGKMIINSVIQISNSIPPIAAGIALLMLFST 115

Query: 444 YHLNPNL------------WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491
             +   +             + L   F    Y++  +           + V  +   + W
Sbjct: 116 KQVEDIINRLGLDPVFSVKGIILANFFINAPYMIRILKGTFEDVNPKLEFVGRTLGCSVW 175

Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWN 519
             +  I +P        G I+A    W 
Sbjct: 176 GSFFKITIPLAK----NGLISAIIITWI 199


>gi|288574114|ref|ZP_06392471.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569855|gb|EFC91412.1| binding-protein-dependent transport systems inner membrane
           component [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 213

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 17/189 (8%)

Query: 73  LSAMVISLLFTFVYATLAAKS--RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130
           LS+M IS++   +     A    +  G  L+ IL   Q+ P +  + F+ ++        
Sbjct: 24  LSSMAISIILGLLLGIFIATGGGKGFGRALLTILGASQATPSIAVVAFSFLFVGIG---- 79

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
               +  AI A+    +  + F++   L  +P ++ E +R   ++  Q    + +P +  
Sbjct: 80  ----KAPAILALVIYCLVPVVFNVVSGLLGVPGEVVEAARGIGMTRAQILLKVKLPLASE 135

Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250
            ++  +  + +        + +I  G     +          +K Q+  AIL        
Sbjct: 136 VIMSGVRSAATINIGTATVAAVIGGGGLGDIIF-------TGLKMQNNGAILVGAGLSAI 188

Query: 251 VIFLYDQLL 259
           +  + D + 
Sbjct: 189 LALVVDFVF 197



 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 6/126 (4%)

Query: 391 VVLIIIASIIWIPVGIWI--GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448
           +  + I+ I+ + +GI+I  G        +        A P+          V       
Sbjct: 24  LSSMAISIILGLLLGIFIATGGGKGFGRALLTILGASQATPSIAVVAFSFLFVGIG---- 79

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508
                L ++      ++FNV++G    P +  E A    +T  +    + LP      ++
Sbjct: 80  KAPAILALVIYCLVPVVFNVVSGLLGVPGEVVEAARGIGMTRAQILLKVKLPLASEVIMS 139

Query: 509 GAITAC 514
           G  +A 
Sbjct: 140 GVRSAA 145


>gi|193214631|ref|YP_001995830.1| phosphate ABC transporter, inner membrane subunit PstC
           [Chloroherpeton thalassium ATCC 35110]
 gi|193088108|gb|ACF13383.1| phosphate ABC transporter, inner membrane subunit PstC
           [Chloroherpeton thalassium ATCC 35110]
          Length = 299

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 56  LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK------SRRLGMVLVPILDIMQS 109
              + +   A        S  ++S+     +   AA       S ++  VL   ++++ +
Sbjct: 63  TSQNHVRYGALALIAGTFSVTLVSMAIAVPFGLGAAIYISEFCSPKVKEVLKITIELLAA 122

Query: 110 IPILGFLTFTVVYFMNLYP---GKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDL 165
           IP + +    +     L        IG  +     I       +  S+   +L  +P   
Sbjct: 123 IPSVVWGFIGLTIMNQLIIELFNAPIGLTVLNGGLILALMSVPIIVSIGEDALKAVPDSY 182

Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215
            E S +   + WQ  + + +P +  GL+   ++ +       +A  M   
Sbjct: 183 REASLALGATRWQTIYRVLLPAAKNGLLAAALLGVGRAVGETMAVLMATG 232



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 68/176 (38%), Gaps = 14/176 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF------RPHISSKIQPFAQLLAAFPAN 431
           +V +     +     + +++  I +P G+           P +   ++   +LLAA P+ 
Sbjct: 67  HVRYGALALIAGTFSVTLVSMAIAVPFGLGAAIYISEFCSPKVKEVLKITIELLAAIPSV 126

Query: 432 VF----FPLVVSCVSYYHLNPNLWLSL---LMIFGTQWYILFNVI-AGASAFPNDFKEVA 483
           V+      ++   +      P     L   L++      I+ ++      A P+ ++E +
Sbjct: 127 VWGFIGLTIMNQLIIELFNAPIGLTVLNGGLILALMSVPIIVSIGEDALKAVPDSYREAS 186

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539
            +   T W+    ++LP      +  A+   G A   ++   +A+   I + T+ L
Sbjct: 187 LALGATRWQTIYRVLLPAAKNGLLAAALLGVGRAVGETMAVLMATGHSIRIPTSLL 242


>gi|195867748|ref|ZP_03079749.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           9 str. ATCC 33175]
 gi|195660603|gb|EDX53859.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           9 str. ATCC 33175]
          Length = 731

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            F+ LAF++    +  +   I    +   ++     +    ++  Q    T + ++ A++
Sbjct: 382 FFESLAFMVAFAFLAWISLDILVNGIKAINLPTSTVVAYTKNTTGQATINTLIIIIVAIL 441

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP----GK 130
           I L F+   A      AK++    VL+  +D   S P + F  F +V F+ ++     G 
Sbjct: 442 IGLPFSLFVAIYINEYAKNKWPKKVLLFFIDSFGSTPSIIFGMFGLVIFIEIFGFTSMGN 501

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  + LA    I    +   T S+ QSL  +P  + E +     S W+    L +P +  
Sbjct: 502 IGKSLLAGALTITLVVLPTFTRSIQQSLKAVPMSIRENAYGLGCSKWETIVKLVLPQAKK 561

Query: 191 GLVWNMMMSMS 201
           G++  +++++ 
Sbjct: 562 GIISAIVLTIG 572


>gi|146318757|ref|YP_001198469.1| phosphate ABC transporter permease [Streptococcus suis 05ZYH33]
 gi|223933466|ref|ZP_03625450.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptococcus suis 89/1591]
 gi|253751854|ref|YP_003024995.1| phosphate ABC transporter permease [Streptococcus suis SC84]
 gi|253753677|ref|YP_003026818.1| phosphate ABC transporter permease [Streptococcus suis P1/7]
 gi|253755443|ref|YP_003028583.1| phosphate ABC transporter permease [Streptococcus suis BM407]
 gi|330832919|ref|YP_004401744.1| putative phosphate ABC transporter (permease) [Streptococcus suis
           ST3]
 gi|145689563|gb|ABP90069.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus suis 05ZYH33]
 gi|223897839|gb|EEF64216.1| phosphate ABC transporter, inner membrane subunit PstA
           [Streptococcus suis 89/1591]
 gi|251816143|emb|CAZ51767.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251817907|emb|CAZ55680.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819923|emb|CAR46003.1| putative phosphate ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|319758209|gb|ADV70151.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus suis JS14]
 gi|329307142|gb|AEB81558.1| putative phosphate ABC transporter (permease protein)
           [Streptococcus suis ST3]
          Length = 295

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           +   ++  ++IS+  +       A+  +   L   +   ++I+ S+P +    F  + F+
Sbjct: 65  SFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLFGYLIFV 124

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
             +  +   + L+   A+    +  MT ++  SL ++     E   +  LS W+   ++ 
Sbjct: 125 VQF--EYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETVLHVV 182

Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222
           +P ++PG+V  ++++ SG  F   A+ +   G +   L
Sbjct: 183 IPEALPGIVTGIVLA-SGRIFGEAAALIYTAGQSAPAL 219



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 62/196 (31%), Gaps = 15/196 (7%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY------QDVLYVIWLGCITMFRVVV 392
           +++  +      V+  +   +    +   + H ++                 I ++    
Sbjct: 8   KLATGILYSIAGVIVVILTSLILYILLRGLPHVSWDFLTSKSSSYKAGGGIGIQLYNSFF 67

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA-FPANVFFP-LVVSCVSYYHLNPNL 450
           L+++  +I +P+    G      +K  P    +          P +VV    Y       
Sbjct: 68  LLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRTCIEILSSLPSVVVGLFGYLIFVVQF 127

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFK-------EVASSFHITGWRWWRYIILPGIF 503
                ++ G     +FN+        +  +       E   +  ++ W    ++++P   
Sbjct: 128 EYGFSILSGALALTVFNLPQMTRNVEDSLRHVHHTQREAGLALGLSRWETVLHVVIPEAL 187

Query: 504 PYYVTGAITACGGAWN 519
           P  VTG + A G  + 
Sbjct: 188 PGIVTGIVLASGRIFG 203


>gi|124025691|ref|YP_001014807.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           NATL1A]
 gi|112818724|gb|ABI23485.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           NATL1A]
 gi|123960759|gb|ABM75542.1| putative phosphate ABC transporter [Prochlorococcus marinus str.
           NATL1A]
          Length = 317

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 93/278 (33%), Gaps = 33/278 (11%)

Query: 23  LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82
           +  +++  I  ++ +   E+     +  +     +  +    A       L   + SLL 
Sbjct: 35  MVAIVLFSIFAVVYYESTESISRYGLRFLFSSAWNPVTDEYGAFTAIYGTLFTSIASLLI 94

Query: 83  TFVYATLAAKS-------RRLGMVLVPILDIMQSIPILGF-----------------LTF 118
                   A         + +  V+  +++++ +IP +                   + +
Sbjct: 95  AIPLGVGTAIFITENIIPKYIRNVIGIMVELLAAIPSVVLGLWAVFIMEPFIRPFLNIIY 154

Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLEEVSRSFRLSGW 177
            +  F+  +  + +GA +     I    +  +  S+   SL  +P  L + +     S W
Sbjct: 155 ELFGFIPFFGTQPLGAGMMPAILILVVMILPIITSISKDSLNQVPSKLRQAAYGIGASRW 214

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP------GIGSYIAL 231
              + + +P ++ G+   +++++       +A  MI+                I S +A 
Sbjct: 215 TTIFKVIIPAAISGITGGVLLALGRAMGETMAVTMIIGNSNNFSWSIFAPSYTISSMLAN 274

Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269
              E D   +  + L    +I +   LL      W  K
Sbjct: 275 QFGEADGSQV--SSLMYAALILMILTLLVNVFAQWIVK 310



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 55/176 (31%), Gaps = 16/176 (9%)

Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP---VGIWIG--FRPHISSKIQP 420
            I         +++         R V+ I++  +  IP   +G+W      P I   +  
Sbjct: 93  LIAIPLGVGTAIFITENIIPKYIRNVIGIMVELLAAIPSVVLGLWAVFIMEPFIRPFLNI 152

Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDF 479
             +L    P                L   +  ++L++      I+ ++     +  P+  
Sbjct: 153 IYELFGFIP----------FFGTQPLGAGMMPAILILVVMILPIITSISKDSLNQVPSKL 202

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535
           ++ A     + W     +I+P        G + A G A   ++   +      +  
Sbjct: 203 RQAAYGIGASRWTTIFKVIIPAAISGITGGVLLALGRAMGETMAVTMIIGNSNNFS 258


>gi|282864171|ref|ZP_06273228.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
 gi|282561249|gb|EFB66794.1| binding-protein-dependent transport systems inner membrane
           component [Streptomyces sp. ACTE]
          Length = 312

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 84/246 (34%), Gaps = 9/246 (3%)

Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366
            P  + +  +   L  +    P  +L + +++    +LD F      G+     +     
Sbjct: 33  RPRRSVLLTVLMGLTALYALLPLVWLVINASKTQKNLLDSF------GLWFSGDFALWDN 86

Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426
           I    TY D ++V W    T+  VVV    A+ + +  G  +        +      + A
Sbjct: 87  ISQTLTYDDGIFVRWF-LNTLLYVVVGAGGATFLAVLGGYGLAKFDFAGKRAVFATVIGA 145

Query: 427 -AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485
            A PA           S   L    W  ++    + + +    +  A A P +  E A  
Sbjct: 146 VAVPATALAVPTFLMFSKMGLTNTPWSVIIPSLISPFGLYLMWVFAAEAVPTELLEAARV 205

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAW-NASIVSEVASWGHIHLRTTGLGAYIA 544
                 R +  + LP + P  VT  +      W N  +   +      +  T GL A+  
Sbjct: 206 DGSGELRTFFRVALPLLAPGIVTVLLFTMVQTWNNYFLPLIMIKDPDWYPLTLGLNAWNE 265

Query: 545 ESTEKG 550
           +++  G
Sbjct: 266 QASTAG 271



 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 52  VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSI 110
             +T D     ++   T L ++     +     +     AK    G   +   +    ++
Sbjct: 89  QTLTYDDGIFVRWFLNTLLYVVVGAGGATFLAVLGGYGLAKFDFAGKRAVFATVIGAVAV 148

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P       T + F  +           ++        + +      +   +P +L E +R
Sbjct: 149 PATALAVPTFLMFSKMGLTNTP----WSVIIPSLISPFGLYLMWVFAAEAVPTELLEAAR 204

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205
                  + F+ + +P   PG+V  ++ +M   W 
Sbjct: 205 VDGSGELRTFFRVALPLLAPGIVTVLLFTMVQTWN 239


>gi|313125581|ref|YP_004035845.1| phosphate ABC transporter membrane protein 2, phot family
           [Halogeometricum borinquense DSM 11551]
 gi|312291946|gb|ADQ66406.1| phosphate ABC transporter membrane protein 2, PhoT family
           [Halogeometricum borinquense DSM 11551]
          Length = 546

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 68  TTLRMLSAMVISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124
           T   +  A+V ++      A      A+      ++    D + S P + +  F + + +
Sbjct: 306 TVWVVFGAVVFAIPLGVGAAVFLTEYAERGWFTKLVEISTDGLWSTPSIVYGLFGLAFLV 365

Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184
                    + L+ +  +    +  +  +  ++L ++P D  + S +  +  W+    + 
Sbjct: 366 PRLGNTT--SLLSGMLVLGFMMLPLVVITSREALKSVPDDYRDASAALGVGKWETIKSVV 423

Query: 185 VPFSMPGLVWNMMMSMS 201
           +P +MPG++   ++ + 
Sbjct: 424 LPAAMPGVITGAILGIG 440



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 12/166 (7%)

Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-------R 411
           + W    +++        +  I+   +    VV     A +  IP+G+           R
Sbjct: 278 LVWFYWPFVMEGVALMTEINGIFPAIVGTVWVVFG---AVVFAIPLGVGAAVFLTEYAER 334

Query: 412 PHISSKIQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469
              +  ++     L + P+ V+  F L        +    L   L++ F     ++    
Sbjct: 335 GWFTKLVEISTDGLWSTPSIVYGLFGLAFLVPRLGNTTSLLSGMLVLGFMMLPLVVITSR 394

Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515
               + P+D+++ +++  +  W   + ++LP   P  +TGAI   G
Sbjct: 395 EALKSVPDDYRDASAALGVGKWETIKSVVLPAAMPGVITGAILGIG 440


>gi|227875713|ref|ZP_03993841.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Mobiluncus mulieris ATCC 35243]
 gi|269976738|ref|ZP_06183714.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris 28-1]
 gi|227843655|gb|EEJ53836.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Mobiluncus mulieris ATCC 35243]
 gi|269935103|gb|EEZ91661.1| binding-protein-dependent transport systems inner membrane
           component [Mobiluncus mulieris 28-1]
          Length = 281

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 75/183 (40%), Gaps = 6/183 (3%)

Query: 78  ISLLFTFVYATLAAKSRRLGMVLVPILDI-MQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136
           ++LL   + +   ++    G  ++ I  I +Q+IP +  L     YF  +   K+     
Sbjct: 88  LTLLVAILASYAFSRYEFPGKKIINIFIISVQAIPPITLLIP---YFGLMVALKLYNTYQ 144

Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196
             IF      +      +      +PR+L+E ++    + +   W + VP S+PG++   
Sbjct: 145 GLIFTYMVLTLPYAIIMLTGYFNTLPRELDEAAKVDGSTSFGALWRILVPISIPGILSVA 204

Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAMLTMLGVIFLY 255
           + +    W   + +  +   + +  +P IG  + +     D   ++  ++L  + VI L+
Sbjct: 205 IYTFMIAWNEYLFALTLTRTNDMRTVP-IGIQLLMGQHSYDWNEMMAMSVLGSIPVIILF 263

Query: 256 DQL 258
              
Sbjct: 264 IFF 266



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 3/192 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFPAN-VFFPLVVSCVSY 443
           + F   ++  +  ++ I                I  F   + A P   +  P     V+ 
Sbjct: 78  SYFIAGMVATLTLLVAILASYAFSRYEFPGKKIINIFIISVQAIPPITLLIPYFGLMVAL 137

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
              N    L    +  T  Y +  +    +  P +  E A     T +     I++P   
Sbjct: 138 KLYNTYQGLIFTYMVLTLPYAIIMLTGYFNTLPRELDEAAKVDGSTSFGALWRILVPISI 197

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P  ++ AI     AWN  + +   +  +       +G  +        + E++   ++  
Sbjct: 198 PGILSVAIYTFMIAWNEYLFALTLTRTNDMRTVP-IGIQLLMGQHSYDWNEMMAMSVLGS 256

Query: 564 CFVLALNRFLWH 575
             V+ L  F   
Sbjct: 257 IPVIILFIFFQR 268


>gi|227833322|ref|YP_002835029.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184306|ref|ZP_06043727.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454338|gb|ACP33091.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 312

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 93/245 (37%), Gaps = 21/245 (8%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT--LDVHSLPQYASRTTLRMLSAM 76
             +L+  ++   +   +L+ +  T   R  +D    T  L+  +   Y        + + 
Sbjct: 18  RRNLIYTIITAVLSVAVLYWVLSTLGERGQLDSALWTPFLNNQTWTTYLLPGLRGTILSA 77

Query: 77  VISLLFTFVYATLAAKSRRLGMVLVP-----ILDIMQSIPILGFLTFTVVYF-MNLYPGK 130
             S++   V+  +    R    V V      +++  ++IP+L  + F    F +      
Sbjct: 78  AASIVLAIVFGIIFGLGRLSENVFVRGLCGVVVEFFRAIPVLLLMIFAYQLFAIYDVVPS 137

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188
              A  A +FA+       +   +   + ++P+   E +R+  LS  Q    + +P +  
Sbjct: 138 KQLAFSAVVFALTLYNGSVVAEILRSGIKSLPKGQTEAARALGLSHGQTMRTILLPQAVA 197

Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
             +P L+  M++++         +    +G   +   GI S    +  +  L +++   +
Sbjct: 198 AMLPALIAQMVIALKDS------ALGYQIGYVEVVRSGIQS---ASYNKNYLASLIVVAI 248

Query: 247 TMLGV 251
            M+ +
Sbjct: 249 IMILI 253



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 85/265 (32%), Gaps = 26/265 (9%)

Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--- 377
             +R     +       +R      I     V  +   ++       ++   +   L   
Sbjct: 1   MAVRATVLYDAPGPKGKRRNLIYTIITAVLSVAVLYWVLSTLGERGQLDSALWTPFLNNQ 60

Query: 378 ----YVIWLGCITMFRVVVLIIIASIIWIPVGI-WIGFRPHISSKIQPFAQLLAAFPANV 432
               Y++     T+      I++A +  I  G+  +     +        +   A P  +
Sbjct: 61  TWTTYLLPGLRGTILSAAASIVLAIVFGIIFGLGRLSENVFVRGLCGVVVEFFRAIPVLL 120

Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN-------VIAGASAFPNDFKEVASS 485
                    + Y + P+  L+   +       L+N       + +G  + P    E A +
Sbjct: 121 LMIFAYQLFAIYDVVPSKQLAFSAVVFAL--TLYNGSVVAEILRSGIKSLPKGQTEAARA 178

Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545
             ++  +  R I+LP      +   I     A   S +      G++ +  +G    I  
Sbjct: 179 LGLSHGQTMRTILLPQAVAAMLPALIAQMVIALKDSALG--YQIGYVEVVRSG----IQS 232

Query: 546 STEKGSFPEVVLGVLIMCCFVLALN 570
           ++   ++   +  ++++   ++ +N
Sbjct: 233 ASYNKNY---LASLIVVAIIMILIN 254


>gi|138896033|ref|YP_001126486.1| phosphate ABC transporter permease [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267546|gb|ABO67741.1| Phosphate ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 317

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 77/212 (36%), Gaps = 17/212 (8%)

Query: 9   PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ----- 63
           P    +I P +   LA + V+  + IL   + ET      V IV        LP      
Sbjct: 27  PKRMEKIAPKLLFTLAALSVLVTLGILFTLLFETIEFFRRVSIVEFVTSKEWLPWNEEHG 86

Query: 64  --YASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIPILGF 115
               +      L    I++LF       +A       S R   ++ P L+++  IP + +
Sbjct: 87  SFGVAPLVTGTLLTTGIAMLFAVPIGLASAIYLSEYASERTRRIIKPALEVLAGIPTIVY 146

Query: 116 ----LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171
               LT       N+ P   I   L+    +    +  +      ++  +P  + E + +
Sbjct: 147 GFFALTIVTPLLQNVIPDLEIFNALSPGLVMGIMIIPMIASLSEDAMSAVPNSIREGALA 206

Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203
              +  +    + +P +  G++ ++++ +S  
Sbjct: 207 LGATKLEVALKVVLPAAASGVIASVILGISRA 238



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 35/295 (11%)

Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL- 382
           R H+P+   ++    ++ + L      V  G+   + +++I +       + V    WL 
Sbjct: 23  RQHWPKRMEKIA--PKLLFTLAALSVLVTLGILFTLLFETIEFFRRVSIVEFVTSKEWLP 80

Query: 383 -----GCITMFRVVVLII----IASIIWIPVGIWIGF------RPHISSKIQPFAQLLAA 427
                G   +  +V   +    IA +  +P+G+                 I+P  ++LA 
Sbjct: 81  WNEEHGSFGVAPLVTGTLLTTGIAMLFAVPIGLASAIYLSEYASERTRRIIKPALEVLAG 140

Query: 428 FPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479
            P  V+         PL+ + +    +   L   L+M       I        SA PN  
Sbjct: 141 IPTIVYGFFALTIVTPLLQNVIPDLEIFNALSPGLVMGIMIIPMIASLSEDAMSAVPNSI 200

Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG------HIH 533
           +E A +   T       ++LP      +   I     A   +++  VA          + 
Sbjct: 201 REGALALGATKLEVALKVVLPAAASGVIASVILGISRAVGETMIVAVAGGSSPEFTFDVT 260

Query: 534 LRTTGLGAYIAEST--EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586
                L AYI + T  + G    +   +  +   +      + + L  Y +R  R
Sbjct: 261 KSIQTLTAYIVQVTTGDAGYGTTIYYSIYAVGMTLFLFT-LVMNVLAQYISRRFR 314


>gi|116750313|ref|YP_847000.1| phosphate ABC transporter inner membrane subunit PstA
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699377|gb|ABK18565.1| phosphate ABC transporter, inner membrane subunit PstA
           [Syntrophobacter fumaroxidans MPOB]
          Length = 288

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 26  VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85
           + +  II+ L++          +      ++    +    + T L    +M+++  +   
Sbjct: 30  LALFIIISFLVYNGWRAVDWTFLSQPPLDSMTRGGIFPCIAGTFLLGFGSMLVAFPWGVA 89

Query: 86  YATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142
            A      A+      V+   ++ +  +P + F  F + +F+       +G  + +    
Sbjct: 90  SAIFLHEYARPGPALRVIRLGINNLAGVPSVVFGLFGLAFFV---TWCKLGVSILSGVLT 146

Query: 143 FTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201
               +  +     + +L ++P    E S +   + WQ    + +P + PG++   ++ +S
Sbjct: 147 LGVLILPVIIGTAEEALRSVPATYREASLALGATKWQTILRVVLPAAFPGMLTGSILGIS 206

Query: 202 GG 203
             
Sbjct: 207 RA 208



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 8/187 (4%)

Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV---LYVIWLGCITMFRVVVLII 395
           R + +++     ++    +   W+++ +        D      +      T       ++
Sbjct: 22  RGAALINGLALFIIISFLVYNGWRAVDWTFLSQPPLDSMTRGGIFPCIAGTFLLGFGSML 81

Query: 396 IASIIWIPVGIWIGFRPH---ISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLW 451
           +A    +   I++            I+     LA  P+ VF    ++    +  L  ++ 
Sbjct: 82  VAFPWGVASAIFLHEYARPGPALRVIRLGINNLAGVPSVVFGLFGLAFFVTWCKLGVSIL 141

Query: 452 LSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             +L +      ++         + P  ++E + +   T W+    ++LP  FP  +TG+
Sbjct: 142 SGVLTLGVLILPVIIGTAEEALRSVPATYREASLALGATKWQTILRVVLPAAFPGMLTGS 201

Query: 511 ITACGGA 517
           I     A
Sbjct: 202 ILGISRA 208


>gi|15613358|ref|NP_241661.1| sugar transport system (permease) (binding protein dependent
           transporter) [Bacillus halodurans C-125]
 gi|10173409|dbj|BAB04514.1| sugar transport system (permease) (binding protein dependent
           transporter) [Bacillus halodurans C-125]
          Length = 322

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%)

Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423
             +    + +Q    V     +T+F  VV  +++  I       I  +  +  K+  F  
Sbjct: 80  WSFDAYRYLWQMRSEVFRAYGVTIFITVVGTLMSVSIIALYAYAISRKQFLYRKLFTFIA 139

Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483
                 +    P  +    +  L  ++W  +L +    +YI+        + P    E A
Sbjct: 140 FFTMLFSGGMVPFYIVMTQFLGLKNSVWALILPMAVNAFYIIIMRTFFQRSVPEAILESA 199

Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519
                  +R +  I+LP   P   T A+ +    WN
Sbjct: 200 RIDGAGEFRIFFKIVLPLSIPGIATIALFSTLAYWN 235



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 4/138 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T    +   ++S+    +YA   ++ + L   L   +     +   G + F +V    L 
Sbjct: 102 TIFITVVGTLMSVSIIALYAYAISRKQFLYRKLFTFIAFFTMLFSGGMVPFYIVMTQFLG 161

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
               +   + A+        + +         ++P  + E +R      ++ F+ + +P 
Sbjct: 162 ----LKNSVWALILPMAVNAFYIIIMRTFFQRSVPEAILESARIDGAGEFRIFFKIVLPL 217

Query: 188 SMPGLVWNMMMSMSGGWF 205
           S+PG+    + S    W 
Sbjct: 218 SIPGIATIALFSTLAYWN 235


>gi|218553442|ref|YP_002386355.1| putrescine ABC transporter membrane protein [Escherichia coli IAI1]
 gi|293433154|ref|ZP_06661582.1| hypothetical protein ECCG_01279 [Escherichia coli B088]
 gi|300817045|ref|ZP_07097264.1| putrescine transport system permease protein PotH [Escherichia coli
           MS 107-1]
 gi|218360210|emb|CAQ97760.1| putrescine transporter subunit: membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|291323973|gb|EFE63395.1| hypothetical protein ECCG_01279 [Escherichia coli B088]
 gi|300530397|gb|EFK51459.1| putrescine transport system permease protein PotH [Escherichia coli
           MS 107-1]
          Length = 317

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 87/237 (36%), Gaps = 20/237 (8%)

Query: 34  ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93
           ++     + ++  ++ + + +T D      Y  ++    + + +  LL  +  A   A S
Sbjct: 69  LMEWADGQLSITLNLGNFLQLTDDPLYFDAY-LQSLQVAVISTICCLLIGYPLAWAVAHS 127

Query: 94  RRLGMVLVPILDIMQS-----IPILGFLTFT---------VVYFM-NLYPGKVIGAELAA 138
           +     ++ +L I+ S     I +  ++            +++      P  ++   LA 
Sbjct: 128 KPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAV 187

Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198
              I  + V  M   +Y +L  I   L E +        + F+ + VP +  G++   M+
Sbjct: 188 YIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSML 247

Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255
                    V  E++   D+++    IG  +           +  A+  ++ ++ + 
Sbjct: 248 VFIPAVGEFVIPELLGGPDSIM----IGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300


>gi|302386901|ref|YP_003822723.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
 gi|302197529|gb|ADL05100.1| binding-protein-dependent transport systems inner membrane
           component [Clostridium saccharolyticum WM1]
          Length = 550

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 68/524 (12%), Positives = 151/524 (28%), Gaps = 67/524 (12%)

Query: 65  ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI-----------L 113
             R+    +     +L      A L ++    G   + I  IM  +              
Sbjct: 64  LGRSLFVSIVTTATTLAVGVPMAYLMSRYNVFGKRFIHIFIIMSLMSPPFIGAYSWIMLF 123

Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSF 172
           G   F   +F  +            I  +FT +++  +      ++ +I   LEE + + 
Sbjct: 124 GRAGFVTRFFEGIGIHLPGIYGKLGIILVFTFKLFPYVYLYTSGAMGSIDSSLEEAAENL 183

Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232
             +  ++   + +P  +P +    +M             +I  G  V+P+     Y++  
Sbjct: 184 GSNKLRRLMTITIPVILPSIAAGAIMVFMTSLADFGTPMLIGEGYMVLPVLVYNEYMSEI 243

Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292
                L + L  ++ +     L  Q                             ++ RK 
Sbjct: 244 GGNAHLASALSVIVVLCSTTVLLLQ---------------------------KYFVTRKN 276

Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352
             +  +          L   +  L   L       P+  + + S  +  +      F + 
Sbjct: 277 YVMTAMRPPKEEQLHGLKRFLVTLPVMLVTFIGILPQIVVVVSSFVKNDFTGFKKGFSIE 336

Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412
             V I     +       F+   ++++I LG +  + VV    IA               
Sbjct: 337 SYVTIFNRLWTNIRNTFLFSASAIVFIIVLGMLISYIVVRQKGIAG-------------- 382

Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW------YILF 466
                +          P  V   L +S +  ++  P +     +I    +      Y + 
Sbjct: 383 ---QLMDLLIMFPFVIPGAV---LGISLIVAFNKRPLILTGTAVIMIIAFVVRKLPYTVR 436

Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526
           +  A         +E + S  ++  + +  +    + P  ++GAI +     N    S +
Sbjct: 437 SGSAFLQQMDPSVEEASISLGVSPMKTFAKVTARLMAPGILSGAILSWITCINELSSSVM 496

Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
              G     +  +  Y             +  +L +   +  L 
Sbjct: 497 LYGGKTSTISVAI--YTEVVRNSYGTAAALASILTVSTVISLLI 538



 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 18/217 (8%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN---VFFPLVV---- 438
           ++F  +V       + +P+   +        +      +++         +  +++    
Sbjct: 67  SLFVSIVTTATTLAVGVPMAYLMSRYNVFGKRFIHIFIIMSLMSPPFIGAYSWIMLFGRA 126

Query: 439 ---------SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489
                      +    +   L + L+  F    Y+         +  +  +E A +    
Sbjct: 127 GFVTRFFEGIGIHLPGIYGKLGIILVFTFKLFPYVYLYTSGAMGSIDSSLEEAAENLGSN 186

Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549
             R    I +P I P    GAI     +        +   G++ L       Y++E    
Sbjct: 187 KLRRLMTITIPVILPSIAAGAIMVFMTSLADFGTPMLIGEGYMVLPVLVYNEYMSEIGGN 246

Query: 550 GSFPEVVLGVLIMCCFVLAL--NRFLWHPLYLYGTRC 584
                 +  ++++C   + L    F+    Y+     
Sbjct: 247 AHLASALSVIVVLCSTTVLLLQKYFVTRKNYVMTAMR 283



 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 2/191 (1%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127
           T L   SA+V  ++   + + +  + + +   L+ +L +   +     L  +++   N  
Sbjct: 352 TFLFSASAIVFIIVLGMLISYIVVRQKGIAGQLMDLLIMFPFVIPGAVLGISLIVAFNKR 411

Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187
           P  + G  +  I A    ++     S    L  +   +EE S S  +S  + F  +    
Sbjct: 412 PLILTGTAVIMIIAFVVRKLPYTVRSGSAFLQQMDPSVEEASISLGVSPMKTFAKVTARL 471

Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247
             PG++   ++S       + +S M+  G T      I  Y  +        A L ++LT
Sbjct: 472 MAPGILSGAILSWITCINELSSSVMLYGGKTSTISVAI--YTEVVRNSYGTAAALASILT 529

Query: 248 MLGVIFLYDQL 258
           +  VI L   L
Sbjct: 530 VSTVISLLIFL 540


>gi|295676865|ref|YP_003605389.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gi|295436708|gb|ADG15878.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 368

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 59  HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL-VPILDIMQSIPILGFLT 117
             L      + +  L   VIS +   V   +         ++   +++I  ++P L  L 
Sbjct: 153 ARLLYGFGVSVVFGLVLTVISTIVGIVAGAVQGYFGGRTDIVGQRLIEIWNAMPQLYLLI 212

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRL 174
                F   +          A+  +  S    +  S Y     L N  +D    +R+  L
Sbjct: 213 IFSSIFERSF----------ALLIVLLSLFNWIGLSDYVRAEFLRNRQQDYVRAARAMGL 262

Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234
           S WQ  W   +P S+  ++  +  SMS     + + + + +G    P P +G  +A    
Sbjct: 263 SHWQIMWRHVLPNSLTPVITFLPFSMSSAILALTSLDFLGLGVPP-PTPSLGELLAQGKA 321

Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259
             D   I  +   +L  + L    +
Sbjct: 322 NLDAWWISVSTFGVLVAMLLLLTFM 346



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 66/198 (33%), Gaps = 8/198 (4%)

Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI-QPFAQLLAAFPANVFF 434
              +++   +++   +VL +I++I+ I  G   G+    +  + Q   ++  A P     
Sbjct: 152 FARLLYGFGVSVVFGLVLTVISTIVGIVAGAVQGYFGGRTDIVGQRLIEIWNAMPQLYLL 211

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            +  S          + LSL    G   Y+             D+   A +  ++ W+  
Sbjct: 212 IIFSSIFERSFALLIVLLSLFNWIGLSDYVR---AEFLRNRQQDYVRAARAMGLSHWQIM 268

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS--- 551
              +LP      +T    +   A  A    +    G +   T  LG  +A+         
Sbjct: 269 WRHVLPNSLTPVITFLPFSMSSAILALTSLDFLGLG-VPPPTPSLGELLAQGKANLDAWW 327

Query: 552 FPEVVLGVLIMCCFVLAL 569
                 GVL+    +L  
Sbjct: 328 ISVSTFGVLVAMLLLLTF 345


>gi|209547753|ref|YP_002279670.1| binding-protein-dependent transporters inner membrane component
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533509|gb|ACI53444.1| binding-protein-dependent transport systems inner membrane
           component [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 249

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 68/209 (32%), Gaps = 17/209 (8%)

Query: 53  PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG--MVLVPILDIMQSI 110
           P     +SL   A+     ++ ++V S +          +        +   I +  Q+ 
Sbjct: 40  PAVYTQNSLASLAAGHLQLVIGSIVCSAVLAVAGGIFVTRPSGADFLPLSRAIANAGQTF 99

Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170
           P +  L   V               +  + A+F   +  +  +    L  +   + + + 
Sbjct: 100 PPVAVLALAVPA--------TGFGAMPTLIALFLYGLLPIFENTVAGLKQVSPQVLDAAD 151

Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230
              +S  Q+   + +P ++P ++  + ++        V +       + +   G+G  I 
Sbjct: 152 GMGMSATQRLLRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVII 204

Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259
             +   +   IL   L +  +  L    +
Sbjct: 205 AGLISDNTAFILQGGLIVGLMAVLIYDAM 233



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI---QPFAQLLAAFPANVFF 434
            +  L    +  V+  I+ ++++ +  GI++  RP  +  +   +  A     FP     
Sbjct: 47  SLASLAAGHLQLVIGSIVCSAVLAVAGGIFV-TRPSGADFLPLSRAIANAGQTFPPVAVL 105

Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494
            L V    +  +   + L L  +      I  N +AG         + A    ++  +  
Sbjct: 106 ALAVPATGFGAMPTLIALFLYGLL----PIFENTVAGLKQVSPQVLDAADGMGMSATQRL 161

Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554
             + LP   P  + G   A       ++++   +     +   GLG  I       +   
Sbjct: 162 LRVELPLALPLILEGLKVA-------TVINIGTATIGSTVAAKGLGEVIIAGLISDNTAF 214

Query: 555 VVLGVLIMCCFVLAL 569
           ++ G LI+    + +
Sbjct: 215 ILQGGLIVGLMAVLI 229


>gi|256829242|ref|YP_003157970.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578418|gb|ACU89554.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 268

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 71/192 (36%), Gaps = 6/192 (3%)

Query: 8   PPFISRRIFPNIFDLLAFVL-----VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62
           P F  + +  +I D  A  L     +     +   G         +    P    +  LP
Sbjct: 3   PKFSKKAVKIDIGDGAAIPLKKDSGLFNAWWLTFFGAIGIITYLCVTRPEPYWRILQFLP 62

Query: 63  QYASRTTLRMLSAMVISLLFTFVYATL-AAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121
                T    + ++++SL+   +      ++++ L ++    +++++ IP+L  L +   
Sbjct: 63  DGVVVTFQVTILSIMLSLVLGLITGLGRLSRNKVLNLIASTYVEVIRGIPLLVQLFYIYY 122

Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181
               L   K +    AA+ A+       M       + +I +   E +RS   S  Q   
Sbjct: 123 ALGRLEFFKDLPPMAAAVTAMGICYGAYMGEVFRAGIDSIDKGQAEAARSLGFSRAQTMM 182

Query: 182 YLGVPFSMPGLV 193
           Y+ +P +   ++
Sbjct: 183 YVILPQAWRTIL 194



 Score = 38.8 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 60/174 (34%), Gaps = 16/174 (9%)

Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397
           ++ S + + +W      + I     +   +     Y  +L  +  G +  F+V +L I+ 
Sbjct: 23  KKDSGLFNAWWLTFFGAIGI----ITYLCVTRPEPYWRILQFLPDGVVVTFQVTILSIML 78

Query: 398 SIIWIPVGIWIGF-----RPHISSKIQPFAQLLAAFPANVFFPLVVSCVS----YYHLNP 448
           S++   +G+  G         ++     + +++   P  V    +   +     +  L P
Sbjct: 79  SLV---LGLITGLGRLSRNKVLNLIASTYVEVIRGIPLLVQLFYIYYALGRLEFFKDLPP 135

Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502
                  M      Y+     AG  +      E A S   +  +   Y+ILP  
Sbjct: 136 MAAAVTAMGICYGAYMGEVFRAGIDSIDKGQAEAARSLGFSRAQTMMYVILPQA 189


>gi|150006419|ref|YP_001301163.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|254881664|ref|ZP_05254374.1| phosphate ABC transporter [Bacteroides sp. 4_3_47FAA]
 gi|294777061|ref|ZP_06742519.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           vulgatus PC510]
 gi|319643049|ref|ZP_07997682.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
 gi|149934843|gb|ABR41541.1| putative ABC transporter permease protein [Bacteroides vulgatus
           ATCC 8482]
 gi|254834457|gb|EET14766.1| phosphate ABC transporter [Bacteroides sp. 4_3_47FAA]
 gi|294449119|gb|EFG17661.1| phosphate ABC transporter, permease protein PstA [Bacteroides
           vulgatus PC510]
 gi|317385330|gb|EFV66276.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
          Length = 295

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 63/181 (34%), Gaps = 5/181 (2%)

Query: 24  AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83
             +++  I+  +++          +       +    +      T   M  + + +    
Sbjct: 32  IVLILFAILGFIIYKGIGVISWEFLTTAPSDGMTGGGIWPAIVGTFYLMAGSALFAFPVG 91

Query: 84  FVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140
            +        A   +L   +  + + +  IP + F  F +  F+         + LA   
Sbjct: 92  VMSGIYMNEYAPKGKLVRFIRMMTNNLSGIPSIVFGLFGMALFVKYMGFGD--SILAGSL 149

Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200
            +    V  +  +  ++L  IP    E S +   +  Q  W++ +P  MP ++  +++++
Sbjct: 150 TLGLLCVPLVIRTTEEALKAIPDSFREGSLALGATKLQTIWHVILPMGMPNIITGLILAL 209

Query: 201 S 201
            
Sbjct: 210 G 210



 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA--SI 399
            +L      ++  +   I ++ IG I   F        +  G I    V    ++A  ++
Sbjct: 26  KLLSYSIVLILFAILGFIIYKGIGVISWEFLTTAPSDGMTGGGIWPAIVGTFYLMAGSAL 85

Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAA-------FPANVF--FPLVVSCVSYYHLNPNL 450
              PVG+  G   +  +      + +          P+ VF  F + +        +  L
Sbjct: 86  FAFPVGVMSGIYMNEYAPKGKLVRFIRMMTNNLSGIPSIVFGLFGMALFVKYMGFGDSIL 145

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             SL +       ++        A P+ F+E + +   T  +   ++ILP   P  +TG 
Sbjct: 146 AGSLTLGLLCVPLVIRTTEEALKAIPDSFREGSLALGATKLQTIWHVILPMGMPNIITGL 205

Query: 511 ITACG 515
           I A G
Sbjct: 206 ILALG 210


>gi|311739905|ref|ZP_07713739.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304978|gb|EFQ81047.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 273

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 4/199 (2%)

Query: 68  TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI-PILGFLTFTVVYFMNL 126
           + L  L    +++L     A   ++    G  +V  + +  S+ P +  +T     F NL
Sbjct: 69  SLLISLVTTAVAVLIGVFTAYALSRYDFPGKGIVTGIILAASMFPAIALVTPLFQLFGNL 128

Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186
                IG   A I    +  +    +++      +P +LEE +R    S  Q F  + +P
Sbjct: 129 E---WIGTYRAMIIPNISFALPLTVYTLLSFFRQLPWELEEAARVDGASRSQAFRLILLP 185

Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246
            + P L    +++    W   + ++ +   DT      I  +   +  E    A + A  
Sbjct: 186 LAAPALFTTAIIAFITTWNEFMLAKQLSTTDTEPVTVAIARFSGPSAFEYPYAATMAAGA 245

Query: 247 TMLGVIFLYDQLLFRPMIV 265
            +   + +   +    ++ 
Sbjct: 246 LVTIPLVIMVLIFQHRIVA 264



 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 66/196 (33%), Gaps = 2/196 (1%)

Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISS-KIQPFAQLLAAFPANVFF-PLVVSCVSY 443
           ++   +V   +A +I +     +          +       + FPA     PL     + 
Sbjct: 69  SLLISLVTTAVAVLIGVFTAYALSRYDFPGKGIVTGIILAASMFPAIALVTPLFQLFGNL 128

Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503
             +     + +  I       ++ +++     P + +E A     +  + +R I+LP   
Sbjct: 129 EWIGTYRAMIIPNISFALPLTVYTLLSFFRQLPWELEEAARVDGASRSQAFRLILLPLAA 188

Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563
           P   T AI A    WN  ++++  S       T  +  +   S  +  +   +    ++ 
Sbjct: 189 PALFTTAIIAFITTWNEFMLAKQLSTTDTEPVTVAIARFSGPSAFEYPYAATMAAGALVT 248

Query: 564 CFVLALNRFLWHPLYL 579
             ++ +     H +  
Sbjct: 249 IPLVIMVLIFQHRIVA 264


>gi|171920525|ref|ZP_02931805.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           13 str. ATCC 33698]
 gi|188518518|ref|ZP_03003988.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           11 str. ATCC 33695]
 gi|198273565|ref|ZP_03206101.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           4 str. ATCC 27816]
 gi|209554259|ref|YP_002284594.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           10 str. ATCC 33699]
 gi|171903219|gb|EDT49508.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           13 str. ATCC 33698]
 gi|188997936|gb|EDU67033.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           11 str. ATCC 33695]
 gi|198250085|gb|EDY74865.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           4 str. ATCC 27816]
 gi|209541760|gb|ACI59989.1| phosphate transport system permease [Ureaplasma urealyticum serovar
           10 str. ATCC 33699]
          Length = 731

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            F+ LAF++    +  +   I    +   ++     +    ++  Q    T + ++ A++
Sbjct: 382 FFESLAFMVAFAFLAWISLDILVNGIKAINLPTSTVVAYTKNTTGQATINTLIIIIVAIL 441

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP----GK 130
           I L F+   A      AK++    VL+  +D   S P + F  F +V F+ ++     G 
Sbjct: 442 IGLPFSLFVAIYINEYAKNKWPKKVLLFFIDSFGSTPSIIFGMFGLVIFIEIFGFTSMGN 501

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  + LA    I    +   T S+ QSL  +P  + E +     S W+    L +P +  
Sbjct: 502 IGKSLLAGALTITLVVLPTFTRSIQQSLKAVPMSIRENAYGLGCSKWETIVKLVLPQAKK 561

Query: 191 GLVWNMMMSMS 201
           G++  +++++ 
Sbjct: 562 GIISAIVLTIG 572


>gi|163800200|ref|ZP_02194101.1| phosphate ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175643|gb|EDP60437.1| phosphate ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 287

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 67  RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI----MQSIPILGFLTFTVVY 122
            T   +++++ ++     + A    +  ++G  LV I+      +  IP + F  F + +
Sbjct: 71  ATVYMVIASIAVAAPLGIMTAIYLTEYAKVGSRLVKIIRFCTESLAGIPSIIFGLFGMTF 130

Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182
           F+ +          A   +I    V  +  +  ++L  +P+   E S     S     W 
Sbjct: 131 FVAILGLGFSILSGALTLSILILPV--IIRTTEEALMAVPQTYREGSYGLGASKIYTIWR 188

Query: 183 LGVPFSMPGLVWNMMMSMS 201
           L +P +MPG++ ++++S+ 
Sbjct: 189 LILPSAMPGILTSIILSIG 207



 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY----------QDVLYVIWLGCITMFRVVV 392
            L  F   +  G    I W  +   + H  +           +   +  +   T++ V+ 
Sbjct: 19  ALVWFSAALTVGFLFWIIWYILSNGLQHVDWNFITDNYTRTGEEHGIFPMIVATVYMVIA 78

Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPL-VVSCVSYYHLN 447
            I +A+ + I   I++     + S++    +     LA  P+ +F    +   V+   L 
Sbjct: 79  SIAVAAPLGIMTAIYLTEYAKVGSRLVKIIRFCTESLAGIPSIIFGLFGMTFFVAILGLG 138

Query: 448 PNLWLSLLMIFGTQWYILFNVIA-GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506
            ++    L +      ++         A P  ++E +     +       +ILP   P  
Sbjct: 139 FSILSGALTLSILILPVIIRTTEEALMAVPQTYREGSYGLGASKIYTIWRLILPSAMPGI 198

Query: 507 VTGAITACG 515
           +T  I + G
Sbjct: 199 LTSIILSIG 207


>gi|163851158|ref|YP_001639201.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|254560853|ref|YP_003067948.1| ABC transporter ATP-binding protein [Methylobacterium extorquens
           DM4]
 gi|163662763|gb|ABY30130.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium extorquens PA1]
 gi|254268131|emb|CAX24007.1| ATP-binding protein of ABC family transporter [Methylobacterium
           extorquens DM4]
          Length = 321

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 9/183 (4%)

Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450
           +   +I  +  + V I     P +   + P A + +A P     P++V    +   +   
Sbjct: 131 LPGYVIGCLSGLGVAILADRLPVLGRGLLPVANVASALPIVGIAPIMVMWFGFDWPSK-- 188

Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510
             + ++   T + +L    AG +A  +  +++  ++     R    + LP   P+  T  
Sbjct: 189 --AAVVAVMTFFPMLVQAGAGLAATGSIERDLMRTYAAGYARTLLSLRLPMALPFLFTAL 246

Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570
                 A   +IV+E      +     G+G  I+    + S   V   +++      A  
Sbjct: 247 KVNATLALIGAIVAEFFGTPIV-----GMGFRISIEAARLSLDMVWAEIVLAALAGSAFY 301

Query: 571 RFL 573
             +
Sbjct: 302 GLI 304



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 13/187 (6%)

Query: 73  LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132
           L   VI  L     A LA +   LG  L+P+ ++  ++PI+G     V++F   +P K  
Sbjct: 131 LPGYVIGCLSGLGVAILADRLPVLGRGLLPVANVASALPIVGIAPIMVMWFGFDWPSKAA 190

Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192
              +   F +          +   +  +I RDL    R++     +    L +P ++P L
Sbjct: 191 VVAVMTFFPMLVQAG-----AGLAATGSIERDLM---RTYAAGYARTLLSLRLPMALPFL 242

Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252
              + ++ +      + +E         P+ G+G  I++      L  +   ++      
Sbjct: 243 FTALKVNATLALIGAIVAEFFGT-----PIVGMGFRISIEAARLSLDMVWAEIVLAALAG 297

Query: 253 FLYDQLL 259
             +  L+
Sbjct: 298 SAFYGLI 304


>gi|149187434|ref|ZP_01865732.1| phosphate ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838970|gb|EDL55909.1| phosphate ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 312

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 81/219 (36%), Gaps = 15/219 (6%)

Query: 12  SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71
             RIF  +F   A + ++ +  I     +E+      V +  I L  + LP  A      
Sbjct: 34  KERIFHGLFLTSAIIGIVSLAVIAYFIFKESLPAFQAVGVSGIVLGQNWLPP-ALYGVAT 92

Query: 72  MLSAMVISLLFTFVYA----------TLAAKSRRLGMVLVPILDIMQSIPILGF----LT 117
           M+ A V+S L   V                  +RL  ++ P ++++  IP + +    L 
Sbjct: 93  MIVASVVSTLGAVVVGVPVGVLTAIFIAEIAPKRLADIIRPAVELLAGIPSVVYGFFGLV 152

Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177
             V     ++        LA I  +    +  +      S+  +PR  +E S +   S  
Sbjct: 153 IIVPLIQQIFNVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRTYKEGSLALGASKI 212

Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216
              + L VP +  G++  +++ +       +A  M++  
Sbjct: 213 YTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGN 251



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 412 PHISSKIQPFAQLLAAFPANVF--------FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463
             ++  I+P  +LLA  P+ V+         PL+    +    N  L   +++       
Sbjct: 125 KRLADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQQIFNVPAGNTILAGIIVLGVMILPT 184

Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523
           ++        A P  +KE + +   +       +++P      +TG I   G A   ++ 
Sbjct: 185 VITVSETSIRAVPRTYKEGSLALGASKIYTIFKLLVPAARSGIMTGVILGIGRALGETMA 244

Query: 524 SEVASWGHIHLRTT 537
             +       +  +
Sbjct: 245 IIMVMGNAPAMPGS 258


>gi|13357757|ref|NP_078031.1| phosphate transport system permease [Ureaplasma parvum serovar 3
           str. ATCC 700970]
 gi|170762278|ref|YP_001752280.1| phosphate transport system permease [Ureaplasma parvum serovar 3
           str. ATCC 27815]
 gi|171920197|ref|ZP_02931579.1| phosphate transport system permease [Ureaplasma parvum serovar 1
           str. ATCC 27813]
 gi|183508749|ref|ZP_02958223.1| phosphate transport system permease [Ureaplasma parvum serovar 14
           str. ATCC 33697]
 gi|11278991|pir||E82922 phosphate transport system permease UU199 [imported] - Ureaplasma
           urealyticum
 gi|6899164|gb|AAF30606.1|AE002119_11 phosphate transport system permease [Ureaplasma parvum serovar 3
           str. ATCC 700970]
 gi|168827855|gb|ACA33117.1| phosphate transport system permease [Ureaplasma parvum serovar 3
           str. ATCC 27815]
 gi|171902578|gb|EDT48867.1| phosphate transport system permease [Ureaplasma parvum serovar 1
           str. ATCC 27813]
 gi|182675682|gb|EDT87587.1| phosphate transport system permease [Ureaplasma parvum serovar 14
           str. ATCC 33697]
          Length = 731

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 19  IFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77
            F+ LAF++    +  +   I    +   ++     +    ++  Q    T + ++ A++
Sbjct: 382 FFESLAFMVAFAFLAWISLDILVNGIKAINLPTSTVVAYTKNTTGQATINTLIIIIVAIL 441

Query: 78  ISLLFTFVYATLA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP----GK 130
           I L F+   A      AK++    VL+  +D   S P + F  F +V F+ ++     G 
Sbjct: 442 IGLPFSLFVAIYINEYAKNKWPKKVLLFFIDSFGSTPSIIFGMFGLVIFIEIFGFTSMGN 501

Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190
           +  + LA    I    +   T S+ QSL  +P  + E +     S W+    L +P +  
Sbjct: 502 IGKSLLAGALTITLVVLPTFTRSIQQSLKAVPMSIRENAYGLGCSKWETIVKLVLPQAKK 561

Query: 191 GLVWNMMMSMS 201
           G++  +++++ 
Sbjct: 562 GIISAIVLTIG 572


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.317    0.147    0.414 

Lambda     K      H
   0.267   0.0451    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,755,774,513
Number of Sequences: 14124377
Number of extensions: 553726845
Number of successful extensions: 3368460
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 41513
Number of HSP's successfully gapped in prelim test: 54707
Number of HSP's that attempted gapping in prelim test: 3073700
Number of HSP's gapped (non-prelim): 227096
length of query: 587
length of database: 4,842,793,630
effective HSP length: 145
effective length of query: 442
effective length of database: 2,794,758,965
effective search space: 1235283462530
effective search space used: 1235283462530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 85 (37.2 bits)